585 2643 40 30 0 chr2LHet 0 328 -368544 - Copia2_I LTR Copia -2478 1684 1347 1 585 4127 49 142 5 chr2LHet 345 965 -367907 - Copia2_I LTR Copia -3124 1038 334 1 585 1328 25 0 0 chr2LHet 979 1137 -367735 + PROTOP DNA P 155 312 -4168 1 585 28 0 0 0 chr2LHet 1151 1179 -367693 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 3705 59 10 0 chr2LHet 1179 1670 -367202 + PROTOP_B DNA P 658 1153 0 1 585 22 35 0 0 chr2LHet 1704 1733 -367139 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 28 48 0 0 chr2LHet 1961 2003 -366869 + AT_rich Low_complexity Low_complexity 1 42 0 1 585 1353 66 0 11 chr2LHet 2095 2278 -366594 - Copia2_I LTR Copia -1425 2737 2557 1 585 6303 38 13 0 chr2LHet 2276 3328 -365544 - Copia2_I LTR Copia -1708 2454 1347 1 585 997 45 30 8 chr2LHet 3345 3479 -365393 - Copia2_I LTR Copia -3124 1038 902 1 585 614 81 161 9 chr2LHet 3461 3573 -365299 - DNAREP1_DM LINE Penelope -325 269 141 1 585 4001 56 146 5 chr2LHet 3558 4176 -364696 - Copia2_I LTR Copia -3124 1038 334 1 585 1328 25 0 0 chr2LHet 4190 4348 -364524 + PROTOP_B DNA P 154 310 -843 1 585 29 0 0 0 chr2LHet 4362 4391 -364481 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 3687 57 10 4 chr2LHet 4391 4884 -363988 + PROTOP_B DNA P 658 1153 0 1 585 22 35 0 0 chr2LHet 4918 4947 -363925 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 28 48 0 0 chr2LHet 5175 5217 -363655 + AT_rich Low_complexity Low_complexity 1 42 0 1 585 1353 66 0 11 chr2LHet 5309 5492 -363380 - Copia2_I LTR Copia -1425 2737 2557 1 585 6322 38 13 0 chr2LHet 5490 6542 -362330 - Copia2_I LTR Copia -1708 2454 1347 1 585 4127 49 142 5 chr2LHet 6559 7179 -361693 - Copia2_I LTR Copia -3124 1038 334 1 585 1312 32 0 0 chr2LHet 7193 7351 -361521 + PROTOP_B DNA P 154 310 -843 1 585 29 0 0 0 chr2LHet 7365 7394 -361478 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 3693 61 10 0 chr2LHet 7394 7885 -360987 + PROTOP_B DNA P 658 1153 0 1 585 22 35 0 0 chr2LHet 7919 7948 -360924 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 28 48 0 0 chr2LHet 8177 8219 -360653 + AT_rich Low_complexity Low_complexity 1 42 0 1 585 1353 66 0 11 chr2LHet 8311 8494 -360378 - Copia2_I LTR Copia -1425 2737 2557 1 585 6275 38 15 0 chr2LHet 8492 9542 -359330 - Copia2_I LTR Copia -1708 2454 1347 1 585 1007 45 30 8 chr2LHet 9559 9693 -359179 - Copia2_I LTR Copia -3124 1038 902 1 585 614 81 161 9 chr2LHet 9675 9787 -359085 - DNAREP1_DM LINE Penelope -325 269 141 1 585 4023 54 146 5 chr2LHet 9772 10390 -358482 - Copia2_I LTR Copia -3124 1038 334 1 585 1285 38 0 0 chr2LHet 10404 10562 -358310 + PROTOP_B DNA P 154 310 -843 1 585 29 0 0 0 chr2LHet 10576 10605 -358267 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 3696 57 10 4 chr2LHet 10605 11099 -357773 + PROTOP_B DNA P 657 1153 0 1 585 198 72 40 68 chr2LHet 11136 11210 -357662 + (TTTA)n Simple_repeat Simple_repeat 1 72 0 1 585 3442 35 28 0 chr2LHet 11212 11638 -357234 - Copia2_I LTR Copia -2378 1784 1347 1 585 1007 45 30 8 chr2LHet 11655 11789 -357083 - Copia2_I LTR Copia -3124 1038 902 1 585 614 81 161 9 chr2LHet 11771 11883 -356989 - DNAREP1_DM LINE Penelope -325 269 141 1 585 3828 50 69 6 chr2LHet 11868 12388 -356484 - Copia2_I LTR Copia -3124 1038 486 1 585 890 71 0 0 chr2LHet 12387 12499 -356373 + PROTOP DNA P 4369 4480 0 1 585 916 140 113 6 chr2LHet 12499 12704 -356168 - DNAREP1_DM LINE Penelope -265 329 117 1 585 12036 0 0 0 chr2LHet 12961 14293 -354579 - DOC LINE Jockey -1957 2768 1437 1 585 17627 1 0 1 chr2LHet 14311 16268 -352604 + DOC LINE Jockey 2770 4725 0 1 585 28 48 0 0 chr2LHet 16510 16552 -352320 + AT_rich Low_complexity Low_complexity 1 42 0 1 585 1353 66 0 11 chr2LHet 16644 16827 -352045 - Copia2_I LTR Copia -1425 2737 2557 1 585 9036 27 19 0 chr2LHet 16825 17912 -350960 - Copia2_I LTR Copia -1708 2454 1347 1 585 4087 52 142 5 chr2LHet 17929 18549 -350323 - Copia2_I LTR Copia -3124 1038 334 1 585 1328 25 0 0 chr2LHet 18563 18721 -350151 + PROTOP_B DNA P 154 310 -843 1 585 29 0 0 0 chr2LHet 18735 18764 -350108 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 2841 57 150 2 chr2LHet 18764 19197 -349675 + PROTOP_B DNA P 657 1153 0 1 585 891 144 111 5 chr2LHet 19197 19386 -349486 - DNAREP1_DM LINE Penelope -269 325 117 1 585 21 36 0 0 chr2LHet 19636 19664 -349208 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 21 57 0 0 chr2LHet 19745 19780 -349092 + AT_rich Low_complexity Low_complexity 1 35 0 1 585 28 48 0 0 chr2LHet 19893 19935 -348937 + AT_rich Low_complexity Low_complexity 1 42 0 1 585 228 227 122 10 chr2LHet 21722 21820 -347052 + DNAREP1_DM LINE Penelope 2 110 -484 1 585 705 137 67 67 chr2LHet 21856 22083 -346789 + DNAREP1_DM LINE Penelope 98 330 -264 1 585 330 181 186 65 chr2LHet 22077 22201 -346671 + DNAREP1_DM LINE Penelope 91 229 -365 1 585 320 64 43 0 chr2LHet 22482 22529 -346343 - PROTOP DNA P -1 4479 4430 1 585 248 135 0 0 chr2LHet 22553 22590 -346282 - PROTOP DNA P -2886 1594 1558 1 585 922 178 177 29 chr2LHet 22685 22928 -345944 + LINEJ1_DM LINE Jockey 3771 4049 -971 1 585 1137 162 191 0 chr2LHet 22971 23243 -345629 - PROTOP DNA P -4156 324 1 1 585 23 0 0 0 chr2LHet 23542 23565 -345307 + AT_rich Low_complexity Low_complexity 1 23 0 1 585 23 33 0 0 chr2LHet 23580 23610 -345262 + AT_rich Low_complexity Low_complexity 1 30 0 1 585 374 226 0 108 chr2LHet 24774 24903 -343969 + DNAREP1_DM LINE Penelope 127 241 -353 1 585 28 0 0 0 chr2LHet 25295 25323 -343549 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 320 269 7 15 chr2LHet 25474 25608 -343264 - DNAREP1_DM LINE Penelope -310 284 152 1 585 1362 97 123 4 chr2LHet 25608 25835 -343037 - DNAREP1_DM LINE Penelope 0 594 341 1 585 260 212 46 23 chr2LHet 26693 26780 -342092 - PROTOP DNA P -1 4479 4391 1 585 226 265 188 34 chr2LHet 27013 27189 -341683 - G5_DM LINE Jockey -183 4673 4471 1 585 243 248 190 33 chr2LHet 27539 27660 -341212 - G5A_DM LINE Jockey -448 2393 2254 1 585 750 321 6 36 chr2LHet 27763 28096 -340776 - G5_DM LINE Jockey -1497 3359 3037 1 585 1681 165 148 15 chr2LHet 28649 29048 -339824 - DNAREP1_DM LINE Penelope -15 579 128 1 585 9306 19 6 1 chr2LHet 29427 30526 -338346 + PROTOP_A DNA P 1 1105 0 1 585 4498 64 10 32 chr2LHet 30526 31199 -337673 + TC1-2_DM DNA Tc1 987 1644 0 1 585 213 204 0 53 chr2LHet 31521 31578 -337294 + (TATG)n Simple_repeat Simple_repeat 3 56 0 1 585 26 74 0 0 chr2LHet 31950 32004 -336868 + AT_rich Low_complexity Low_complexity 1 54 0 1 585 23 68 0 0 chr2LHet 33133 33177 -335695 + AT_rich Low_complexity Low_complexity 1 44 0 1 585 373 186 93 0 chr2LHet 33486 33583 -335289 + DNAREP1_DM LINE Penelope 195 300 -294 1 585 265 77 135 0 chr2LHet 33585 33637 -335235 + DNAREP1_DM LINE Penelope 230 288 -306 1 585 443 153 508 5 chr2LHet 33631 33822 -335050 + DNAREP1_DM LINE Penelope 170 456 -138 1 585 969 129 141 0 chr2LHet 33811 33980 -334892 + DNAREP1_DM LINE Penelope 298 490 -104 1 585 1549 147 19 50 chr2LHet 33980 34303 -334569 + Invader1_LTR LTR Gypsy 1 313 -110 1 585 621 138 0 0 chr2LHet 34302 34396 -334476 + DNAREP1_DM LINE Penelope 501 594 0 1 585 5074 37 75 3 chr2LHet 36188 36887 -331985 - TC1_DM DNA Tc1 -191 1475 726 1 585 4446 60 35 7 chr2LHet 36895 37501 -331371 - TC1_DM DNA Tc1 -1043 623 1 1 585 3298 31 0 3 chr2LHet 37696 38082 -330790 - DIVER2_LTR LTR Pao 0 385 1 1 585 21 0 0 0 chr2LHet 38201 38222 -330650 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 367 201 203 26 chr2LHet 38328 38481 -330391 - PROTOP DNA P -60 4420 4236 1 585 46 33 0 0 chr2LHet 38688 38748 -330124 + AT_rich Low_complexity Low_complexity 1 60 0 1 585 286 79 0 0 chr2LHet 38756 38794 -330078 - PROTOP DNA P -2882 1598 1561 1 585 32 0 0 0 chr2LHet 38943 38975 -329897 + AT_rich Low_complexity Low_complexity 1 32 0 1 585 571 155 0 52 chr2LHet 39021 39157 -329715 - PROTOP DNA P -4054 426 298 1 585 1973 132 48 40 chr2LHet 39333 39705 -329167 + DNAREP1_DM LINE Penelope 220 594 0 1 585 351 115 177 13 chr2LHet 40068 40147 -328725 + DNAREP1_DM LINE Penelope 181 272 -322 1 585 27087 13 2 0 chr2LHet 40462 43516 -325356 - DMRT1A LINE R1 -23 5160 2101 1 585 6331 32 21 6 chr2LHet 43516 44327 -324545 + PROTOP DNA P 1 823 -3657 1 585 5817 18 0 0 chr2LHet 44322 45001 -323871 + PROTOP DNA P 3802 4480 0 1 585 18057 14 11 3 chr2LHet 45001 47091 -321781 - DMRT1A LINE R1 -3076 2107 1 1 585 4524 16 0 0 chr2LHet 47947 48463 -320409 + PROTOP DNA P 1 516 -3964 1 585 3616 0 0 2 chr2LHet 48463 48866 -320006 + STALKER4_LTR LTR Gypsy 1 402 0 1 585 1841 51 58 0 chr2LHet 48893 49187 -319685 + PROTOP DNA P 513 823 -3657 1 585 5815 18 0 0 chr2LHet 49182 49861 -319011 + PROTOP DNA P 3802 4480 0 1 585 1445 89 4 33 chr2LHet 50143 50386 -318486 - Gypsy8_I LTR Gypsy -4111 236 1 1 585 1998 92 0 22 chr2LHet 50386 50697 -318175 - Gypsy8_LTR LTR Gypsy 0 304 1 1 585 760 22 0 0 chr2LHet 50699 50789 -318083 - ROO_LTR LTR Pao -338 90 1 1 585 6235 39 17 7 chr2LHet 50789 51599 -317273 - ROO_I LTR Pao 0 8256 7439 1 585 24031 24 13 2 chr2LHet 51606 55892 -312980 - ROO_I LTR Pao -1884 6372 2030 1 585 1232 106 0 11 chr2LHet 55894 56085 -312787 + Gypsy8_LTR LTR Gypsy 1 189 -115 1 585 1127 48 0 7 chr2LHet 56501 56649 -312223 - ROO_I LTR Pao -6213 2043 1897 1 585 1477 40 20 0 chr2LHet 56650 56849 -312023 - ROO_I LTR Pao -7113 1143 941 1 585 374 63 0 0 chr2LHet 56874 56937 -311935 - ROO_I LTR Pao -7414 842 780 1 585 690 213 14 21 chr2LHet 57906 58050 -310822 + NOMAD_I LTR Gypsy 547 689 -5883 1 585 228 186 0 0 chr2LHet 58082 58141 -310731 + A-rich Low_complexity Low_complexity 1 59 0 1 585 7462 318 38 26 chr2LHet 58516 61771 -307101 + NOMAD_I LTR Gypsy 1177 4470 -2102 1 585 1127 48 0 7 chr2LHet 61799 61947 -306925 - ROO_I LTR Pao -6213 2043 1897 1 585 1477 40 20 0 chr2LHet 61948 62147 -306725 - ROO_I LTR Pao -7113 1143 941 1 585 374 50 0 0 chr2LHet 62172 62232 -306640 - ROO_I LTR Pao -7414 842 783 1 585 1729 66 25 55 chr2LHet 120354 120628 -248244 + Invader2_LTR LTR Gypsy 1 266 0 1 585 3074 34 2 0 chr2LHet 120629 121043 -247829 + Invader2_I LTR Gypsy 2 416 -4176 1 585 826 167 86 125 chr2LHet 121043 121379 -247493 + TIRANT_LTR LTR Gypsy 1 323 -94 1 585 386 237 47 82 chr2LHet 121494 121664 -247208 + TIRANT_I LTR Gypsy 1 164 -7528 1 585 677 296 16 61 chr2LHet 122019 122332 -246540 + TIRANT_I LTR Gypsy 1051 1349 -6343 1 585 22 0 0 0 chr2LHet 122422 122444 -246428 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 254 300 15 15 chr2LHet 122470 122602 -246270 + (CATATA)n Simple_repeat Simple_repeat 2 133 0 1 585 4287 201 19 0 chr2LHet 122651 123502 -245370 + TIRANT_I LTR Gypsy 1394 2260 -5432 1 585 36205 1 0 0 chr2LHet 123504 127726 -241146 + DOC6_DM LINE Jockey 1 4222 0 1 585 1882 213 68 2 chr2LHet 127738 128180 -240692 + TIRANT_I LTR Gypsy 2251 2721 -4971 1 585 3801 13 15 0 chr2LHet 128180 128639 -240233 + PROTOP_A DNA P 1 466 -639 1 585 280 0 0 0 chr2LHet 128637 128672 -240200 + PROTOP_A DNA P 1070 1104 -1 1 585 5130 174 29 1 chr2LHet 128672 129626 -239246 + TIRANT_I LTR Gypsy 2715 3695 -3997 1 585 409 36 18 0 chr2LHet 129625 129681 -239191 + Invader4_I LTR Gypsy 2357 2413 0 1 585 454 96 14 14 chr2LHet 129681 129755 -239117 + Invader4_LTR LTR Gypsy 1 74 -272 1 585 3501 51 11 0 chr2LHet 129753 130222 -238650 + PROTOP_A DNA P 30 503 -602 1 585 186 43 0 0 chr2LHet 130232 130255 -238617 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 585 371 108 0 30 chr2LHet 130287 130345 -238527 - DMTOM1_LTR LTR Gypsy -6 404 349 1 585 493 148 38 83 chr2LHet 130345 130478 -238394 - DMTOM1_LTR LTR Gypsy 0 410 284 1 585 242 207 17 0 chr2LHet 130495 130553 -238319 - DM176_LTR LTR Gypsy -141 366 308 1 585 248 133 22 0 chr2LHet 130671 130716 -238156 - DM176_LTR LTR Gypsy -238 269 224 1 585 21 0 0 0 chr2LHet 130821 130842 -238030 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 557 73 0 92 chr2LHet 130854 130974 -237898 - DMCR1A LINE CR1 -102 4368 4260 1 586 9054 40 5 29 chr2LHet 131284 132497 -236375 - DMCR1A LINE CR1 -205 4265 3082 1 586 32 103 0 0 chr2LHet 133032 133148 -235724 + AT_rich Low_complexity Low_complexity 1 116 0 1 586 2004 96 0 20 chr2LHet 134878 135175 -233697 + Gypsy8_I LTR Gypsy 2676 2966 -1381 1 586 1729 66 25 55 chr2LHet 135623 135897 -232975 + Invader2_LTR LTR Gypsy 1 266 0 1 586 3059 36 2 0 chr2LHet 135898 136312 -232560 + Invader2_I LTR Gypsy 2 416 -4176 1 586 708 141 122 63 chr2LHet 136312 136517 -232355 + TIRANT_LTR LTR Gypsy 1 217 -200 1 586 718 299 16 48 chr2LHet 136685 136994 -231878 + TIRANT_I LTR Gypsy 1051 1349 -6343 1 586 22 0 0 0 chr2LHet 137084 137106 -231766 + AT_rich Low_complexity Low_complexity 1 22 0 1 586 254 300 15 15 chr2LHet 137132 137264 -231608 + (CATATA)n Simple_repeat Simple_repeat 2 133 0 1 586 6128 207 36 1 chr2LHet 137313 138596 -230276 + TIRANT_I LTR Gypsy 1394 2721 -4971 1 586 4757 14 12 0 chr2LHet 138596 139172 -229700 + PROTOP_A DNA P 1 583 -522 1 586 3804 18 0 0 chr2LHet 139170 139627 -229245 + PROTOP_A DNA P 649 1105 0 1 586 8242 167 19 1 chr2LHet 139627 141077 -227795 + TIRANT_I LTR Gypsy 2715 4191 -3501 1 586 3651 185 45 0 chr2LHet 141067 141760 -227112 + TIRANT_I LTR Gypsy 6969 7692 0 1 586 709 170 87 135 chr2LHet 141760 142072 -226800 + TIRANT_LTR LTR Gypsy 1 297 -120 1 586 17564 35 9 11 chr2LHet 142193 144510 -224362 + Invader2_I LTR Gypsy 403 2715 -1877 1 586 40947 0 0 0 chr2LHet 144510 149234 -219638 - DOC LINE Jockey 0 4725 2 1 586 14562 16 8 2 chr2LHet 149235 151078 -217794 + Invader2_I LTR Gypsy 2710 4563 -29 1 586 1375 86 57 61 chr2LHet 151076 151323 -217549 + Invader2_LTR LTR Gypsy 21 266 0 1 586 24 67 0 0 chr2LHet 151468 151513 -217359 + AT_rich Low_complexity Low_complexity 1 45 0 1 586 37 52 0 0 chr2LHet 152020 152078 -216794 + AT_rich Low_complexity Low_complexity 1 58 0 1 586 387 321 31 0 chr2LHet 152746 152939 -215933 + Gypsy12_I LTR Gypsy 3227 3425 -2121 1 586 286 386 4 8 chr2LHet 153211 153462 -215410 + Gypsy12_I LTR Gypsy 3837 4086 -1460 1 586 301 350 39 10 chr2LHet 153357 153565 -215307 + CIRCE LINE Composite 1962 2175 -4181 1 586 431 314 73 25 chr2LHet 154904 155218 -213654 + OSVALDO_I LTR Gypsy 1856 2184 -4469 1 586 274 67 115 16 chr2LHet 155426 155487 -213385 + DNAREP1_DM LINE Penelope 208 274 -320 1 586 2273 80 58 0 chr2LHet 155713 156040 -212832 + Invader4_LTR LTR Gypsy 1 346 0 1 586 4822 46 24 0 chr2LHet 156040 156669 -212203 + Invader4_I LTR Gypsy 1 644 -1769 1 586 6218 29 85 1 chr2LHet 156666 157500 -211372 + DOC3_DM LINE Jockey 3837 4740 0 1 586 2706 151 31 16 chr2LHet 157501 158067 -210805 + Invader4_I LTR Gypsy 625 1196 -1990 1 586 271 59 20 0 chr2LHet 158070 158121 -210751 + Invader4_I LTR Gypsy 1025 1076 -1337 1 586 2333 25 3 0 chr2LHet 158121 158407 -210465 - Gypsy4_LTR LTR Gypsy 0 287 1 1 586 37885 12 10 0 chr2LHet 158407 162908 -205964 - Gypsy4_I LTR Gypsy 0 6288 1743 1 586 12313 14 11 7 chr2LHet 162906 164425 -204447 - Gypsy4_I LTR Gypsy -4763 1525 1 1 586 2307 28 3 0 chr2LHet 164425 164711 -204161 - Gypsy4_LTR LTR Gypsy 0 287 1 1 586 1408 58 96 0 chr2LHet 164711 164919 -203953 + Invader4_I LTR Gypsy 1073 1300 -1113 1 586 1534 133 19 10 chr2LHet 164935 165232 -203640 + Invader4_I LTR Gypsy 1299 1752 -2724 1 586 630 24 12 0 chr2LHet 165233 165315 -203557 + Invader4_I LTR Gypsy 2098 2180 -233 1 586 1386 115 0 0 chr2LHet 165314 165522 -203350 + Invader4_LTR LTR Gypsy 139 346 0 1 586 21 0 0 0 chr2LHet 165797 165818 -203054 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 308 169 117 98 chr2LHet 166167 166313 -202559 + Gypsy8_LTR LTR Gypsy 67 304 0 1 586 287 278 114 24 chr2LHet 166313 166523 -202349 + Gypsy8_I LTR Gypsy 1 229 -4118 1 586 23 0 0 0 chr2LHet 168796 168819 -200053 + AT_rich Low_complexity Low_complexity 1 23 0 1 586 39 38 0 0 chr2LHet 169251 169304 -199568 + AT_rich Low_complexity Low_complexity 1 53 0 1 586 271 188 16 0 chr2LHet 169894 169958 -198914 - DNAREP1_DM LINE Penelope -13 581 517 1 586 1106 158 159 14 chr2LHet 169971 170435 -198437 - DNAREP1_DM LINE Penelope -157 437 29 1 586 328 0 0 0 chr2LHet 170435 170475 -198397 + PROTOP_B DNA P 1 40 -1113 1 586 1864 33 46 0 chr2LHet 170473 170714 -198158 + PROTOP_B DNA P 902 1153 0 1 586 469 78 0 0 chr2LHet 170736 170800 -198072 - DNAREP1_DM LINE Penelope -508 86 23 1 586 9612 14 1 1 chr2LHet 171660 172809 -196063 + DOC2_DM LINE Jockey 3645 4793 0 1 586 238 0 0 0 chr2LHet 174314 174341 -194531 + ZAM_LTR LTR Gypsy 1 27 -445 1 586 4368 21 0 2 chr2LHet 174341 174872 -194000 + PROTOP DNA P 1 529 -3951 1 586 2665 15 3 0 chr2LHet 174867 175199 -193673 + PROTOP_A DNA P 637 969 -136 1 586 1299 164 14 68 chr2LHet 175216 175510 -193362 + ZAM_LTR LTR Gypsy 195 472 0 1 586 227 200 225 0 chr2LHet 179742 179822 -189050 - DNAREP1_DM LINE Penelope -363 231 134 1 586 2045 256 35 15 chr2LHet 179830 180770 -188102 + QUASIMODO_I LTR Gypsy 5102 6060 0 1 586 2074 50 3 66 chr2LHet 180795 181113 -187759 - PROTOP_B DNA P 0 1153 856 1 586 2082 146 31 29 chr2LHet 181305 181722 -187150 + Invader1_LTR LTR Gypsy 1 418 -5 1 586 3902 300 40 39 chr2LHet 181819 183792 -185080 + MICROPIA_I LTR Gypsy 1542 3516 -960 1 586 5356 44 22 4 chr2LHet 183793 184530 -184342 + PROTOP DNA P 1 750 -3730 1 586 1489 34 219 0 chr2LHet 184538 184784 -184088 + PROTOP DNA P 1610 1909 -2571 1 586 995 25 174 0 chr2LHet 184784 184979 -183893 + PROTOP DNA P 2257 2485 -1995 1 586 3556 35 19 0 chr2LHet 184971 185435 -183437 + PROTOP DNA P 2994 3466 -1014 1 586 4913 31 98 0 chr2LHet 185427 186103 -182769 + PROTOP DNA P 3739 4480 0 1 586 2515 109 68 5 chr2LHet 186501 186942 -181930 + Invader1_I LTR Gypsy 2718 3186 0 1 586 1488 135 223 12 chr2LHet 186942 187284 -181588 + Invader1_LTR LTR Gypsy 1 414 -9 1 586 885 195 61 5 chr2LHet 187511 187707 -181165 + LINEJ1_DM LINE Jockey 3794 4000 -1020 1 586 840 201 8 68 chr2LHet 187766 187989 -180883 + Gypsy8_LTR LTR Gypsy 2 210 -94 1 586 361 179 13 0 chr2LHet 187989 188067 -180805 + Gypsy8_I LTR Gypsy 1 79 -4268 1 586 245 225 0 22 chr2LHet 188162 188253 -180619 + Gypsy8_I LTR Gypsy 66 154 -4193 1 586 23 0 0 0 chr2LHet 188533 188556 -180316 + AT_rich Low_complexity Low_complexity 1 23 0 1 586 22 0 0 0 chr2LHet 188768 188790 -180082 + AT_rich Low_complexity Low_complexity 1 22 0 1 586 1315 87 313 4 chr2LHet 189976 190244 -178628 + DNAREP1_DM LINE Penelope 243 594 0 1 586 197 65 32 0 chr2LHet 190450 190481 -178391 + (TAAAAA)n Simple_repeat Simple_repeat 4 35 0 1 586 379 229 18 18 chr2LHet 191248 191359 -177513 + Ulysses_I LTR Gypsy 1952 2062 -4319 1 586 622 304 158 15 chr2LHet 192274 192678 -176194 + Ulysses_I LTR Gypsy 3616 4077 -2304 1 586 235 255 21 21 chr2LHet 192786 192882 -175990 + Ulysses_I LTR Gypsy 4469 4564 -1817 1 586 460 311 11 11 chr2LHet 193221 193400 -175472 + Ulysses_I LTR Gypsy 5674 5852 -529 1 586 13303 132 72 22 chr2LHet 194079 196771 -172101 + STALKER4_I LTR Gypsy 700 3525 -3005 1 586 2062 60 86 0 chr2LHet 196790 197092 -171780 - DMCR1A LINE CR1 0 4470 4143 1 586 2314 80 34 0 chr2LHet 197083 197433 -171439 + Stalker2_I LTR Gypsy 3830 4191 -3211 1 586 2596 78 0 0 chr2LHet 197433 197794 -171078 + BEL_LTR LTR Pao 1 361 0 1 586 1078 75 0 0 chr2LHet 197799 197941 -170931 + BEL_I LTR Pao 2 143 -5261 1 586 3766 0 0 0 chr2LHet 197941 198369 -170503 - ROO_LTR LTR Pao 0 428 1 1 586 13077 16 0 6 chr2LHet 198369 199919 -168953 + BEL_I LTR Pao 139 1679 -3725 1 586 23873 18 20 0 chr2LHet 199914 202777 -166095 + BEL_I LTR Pao 2080 4997 -407 1 586 1989 57 0 0 chr2LHet 202779 203043 -165829 + BEL_LTR LTR Pao 98 361 0 1 586 2628 55 0 42 chr2LHet 203092 203469 -165403 + STALKER4_I LTR Gypsy 4002 4362 -2168 1 586 7376 71 19 32 chr2LHet 203464 204604 -164268 + STALKER4_I LTR Gypsy 4536 5660 -870 1 586 222 154 30 30 chr2LHet 204637 204704 -164168 + (TTA)n Simple_repeat Simple_repeat 3 69 0 1 586 880 330 45 30 chr2LHet 204961 205781 -163091 - BLASTOPIA_I LTR Gypsy 0 4481 3650 1 586 1146 338 46 29 chr2LHet 206175 207266 -161606 - BLASTOPIA_I LTR Gypsy -1343 3138 2030 1 586 374 250 15 15 chr2LHet 208181 208311 -160561 - BLASTOPIA_I LTR Gypsy -3605 876 747 1 586 32865 3 0 0 chr2LHet 208767 213460 -155412 - FW_DM LINE Jockey -2 4690 1 1 586 292 106 0 0 chr2LHet 213718 213765 -155107 + STALKER4_I LTR Gypsy 6484 6530 0 1 586 1511 98 15 69 chr2LHet 213765 214036 -154836 + STALKER4_LTR LTR Gypsy 1 256 -146 1 586 2399 3 207 6 chr2LHet 214036 214388 -154484 - Invader1_LTR LTR Gypsy 0 423 1 1 586 255 107 29 106 chr2LHet 214399 214468 -154404 - ROVER-LTR_DM LTR Gypsy -7 403 308 1 586 1164 86 5 26 chr2LHet 214484 214648 -154224 - ROVER-LTR_DM LTR Gypsy -130 237 78 1 586 3742 2 0 0 chr2LHet 214648 215076 -153796 + ROO_LTR LTR Pao 1 428 0 1 586 36747 1 3 0 chr2LHet 215076 219395 -149477 + ROO_I LTR Pao 1 4333 -3923 1 586 29139 10 1 2 chr2LHet 232395 235910 -132962 - IDEFIX_I LTR Gypsy -2117 3511 1 1 586 4426 9 61 0 chr2LHet 236389 236949 -131923 - IDEFIX_LTR LTR Gypsy 0 594 1 1 586 241 105 0 0 chr2LHet 236917 236955 -131917 + BARI1 DNA Tc1 3 40 -1710 1 586 1257 291 2 2 chr2LHet 237279 237706 -131166 - ZAM_I LTR Gypsy -2961 4529 4103 1 586 45055 12 6 0 chr2LHet 237707 243077 -125795 + IVK_DM LINE I 1 5402 0 1 586 657 259 15 15 chr2LHet 243079 243344 -125528 - ZAM_I LTR Gypsy -2591 3697 3481 1 586 969 305 65 23 chr2LHet 243359 243882 -124990 - Gypsy5_I LTR Gypsy -3759 2750 2206 1 586 276 232 49 29 chr2LHet 244775 244877 -123995 - ACCORD2_I LTR Gypsy -4675 2537 2434 1 586 22 35 0 0 chr2LHet 245779 245808 -123064 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 636 312 35 14 chr2LHet 246365 246848 -122024 - Invader6_I LTR Gypsy -602 3874 3303 1 586 6591 82 12 7 chr2LHet 247017 248155 -120717 - G2_DM LINE Jockey 0 4346 2289 1 586 2324 309 77 31 chr2LHet 248165 249939 -118933 - Invader6_I LTR Gypsy -933 3166 1396 1 586 274 294 70 48 chr2LHet 250109 250480 -118392 - Invader6_I LTR Gypsy -2903 1196 800 1 586 5604 312 42 23 chr2LHet 251232 254407 -114465 - Copia2_I LTR Copia -97 4065 833 1 586 264 310 17 26 chr2LHet 254565 254681 -114191 - DM1731_I LTR Copia -3341 635 521 1 586 24 0 0 0 chr2LHet 255603 255627 -113245 + AT_rich Low_complexity Low_complexity 1 24 0 1 586 186 217 0 0 chr2LHet 255716 255738 -113134 + (CATATA)n Simple_repeat Simple_repeat 3 24 0 1 586 189 0 0 0 chr2LHet 255738 255759 -113113 + (TTTTC)n Simple_repeat Simple_repeat 4 24 0 1 586 186 217 0 0 chr2LHet 255759 255782 -113090 + (CATATA)n Simple_repeat Simple_repeat 1 23 0 1 586 656 154 217 0 chr2LHet 256355 256530 -112342 - ACCORD2_LTR LTR Gypsy -2 213 1 1 586 311 296 19 0 chr2LHet 256530 256637 -112235 + Ulysses_I LTR Gypsy 4607 4715 -1666 1 586 608 336 48 14 chr2LHet 256952 257392 -111480 + Ulysses_I LTR Gypsy 5605 6059 -322 1 586 254 214 23 23 chr2LHet 258007 258093 -110779 + A-rich Low_complexity Low_complexity 2 87 0 1 586 387 182 182 71 chr2LHet 258531 258829 -110043 - Gypsy_LTR LTR Gypsy -20 462 132 1 586 10440 176 22 17 chr2LHet 258855 260879 -107993 - Gypsy_I LTR Gypsy -3495 3012 979 1 586 3705 7 0 0 chr2LHet 260879 261307 -107565 + ROO_LTR LTR Pao 1 428 0 1 73 66752 1 1 0 chr2LHet 261307 269564 -99308 + ROO_I LTR Pao 1 8256 0 1 587 3917 2 0 0 chr2LHet 269564 269992 -98880 + ROO_LTR LTR Pao 1 428 0 1 587 529 248 0 2 chr2LHet 269992 270122 -98750 - Gypsy_I LTR Gypsy -5524 983 868 1 587 218 200 0 0 chr2LHet 270162 270212 -98660 + (TTA)n Simple_repeat Simple_repeat 1 50 0 1 587 2151 243 19 5 chr2LHet 270212 270960 -97912 - QUASIMODO_I LTR Gypsy -201 5859 5102 1 587 247 240 173 0 chr2LHet 270968 271072 -97800 + DNAREP1_DM LINE Penelope 134 255 -339 1 587 3902 280 63 77 chr2LHet 272439 276106 -92766 - QUASIMODO_I LTR Gypsy -630 5430 1815 1 587 284 259 127 58 chr2LHet 276275 276652 -92220 - QUASIMODO_I LTR Gypsy -4424 1636 1234 1 587 5675 45 0 0 chr2LHet 276672 277413 -91459 - DOC5_DM LINE Jockey -4 4678 3938 1 587 6011 74 96 39 chr2LHet 277408 278557 -90315 - DOC5_DM LINE Jockey -847 3835 2567 1 587 4610 163 61 25 chr2LHet 278561 279785 -89087 + DM412 LTR Gypsy 1 1140 -5757 1 587 10735 17 46 1 chr2LHet 279784 281411 -87461 + FW_DM LINE Jockey 2991 4691 -1 1 587 4265 136 29 89 chr2LHet 281408 282394 -86478 + DM412 LTR Gypsy 1128 2054 -4843 1 587 14698 59 37 7 chr2LHet 282381 284442 -84430 + DM412 LTR Gypsy 4826 6897 0 1 587 18310 50 26 5 chr2LHet 284494 286952 -81920 - DOC5_DM LINE Jockey -2107 2575 65 1 587 1823 132 53 37 chr2LHet 287220 287660 -81212 - QUASIMODO_LTR LTR Gypsy -69 589 1 1 587 854 93 42 14 chr2LHet 287667 287809 -81063 - IDEFIX_LTR LTR Gypsy -270 324 179 1 587 7436 44 42 0 chr2LHet 287817 288786 -80086 - ROOA_I LTR Pao -468 6381 5372 1 587 234 147 0 0 chr2LHet 288805 288839 -80033 - ROOA_I LTR Pao -1467 5382 5349 1 587 229 118 0 0 chr2LHet 289018 289052 -79820 - ROOA_I LTR Pao -1246 5603 5570 1 587 8579 77 79 60 chr2LHet 289051 290469 -78403 + CIRCE LINE Composite 3516 4960 -1396 1 587 4551 59 9 129 chr2LHet 290816 291631 -77241 + CIRCE LINE Composite 4981 5697 -659 1 587 4011 43 0 2 chr2LHet 291630 292116 -76756 + CIRCE LINE Composite 5868 6352 -4 1 587 17960 162 81 91 chr2LHet 292120 297133 -71739 + CIRCE LINE Composite 1 4960 -1396 1 587 735 69 25 25 chr2LHet 297480 297599 -71273 + CIRCE LINE Composite 4981 5099 -1257 1 587 2216 48 0 0 chr2LHet 297618 297889 -70983 + CIRCE LINE Composite 1 271 -6085 1 587 403 59 0 0 chr2LHet 297893 297944 -70928 + CIRCE LINE Composite 398 448 -5908 1 587 807 76 8 33 chr2LHet 297945 298067 -70805 + BURDOCK_LTR LTR Gypsy 3 121 -154 1 587 36487 29 11 3 chr2LHet 298085 302416 -66456 + BURDOCK_I LTR Gypsy 222 4586 -1274 1 587 8553 19 40 0 chr2LHet 302416 303461 -65411 - PROTOP DNA P 0 4480 3394 1 587 8296 21 11 0 chr2LHet 303455 304427 -64445 - PROTOP DNA P -1241 3239 2257 1 587 254 31 0 0 chr2LHet 304427 304459 -64413 - PROTOP DNA P -2571 1909 1878 1 587 2022 48 0 0 chr2LHet 304476 304744 -64128 - PROTOP DNA P -2664 1816 1549 1 587 5128 46 68 19 chr2LHet 304744 305481 -63391 - PROTOP DNA P -3707 773 1 1 587 4906 23 0 0 chr2LHet 305481 306052 -62820 + BURDOCK_I LTR Gypsy 4580 5150 -710 1 587 8948 27 18 0 chr2LHet 306052 307137 -61735 + PROTOP_A DNA P 1 1105 0 1 587 5902 21 12 28 chr2LHet 307137 307865 -61007 + BURDOCK_I LTR Gypsy 5144 5860 0 1 587 1868 88 3 42 chr2LHet 307866 308152 -60720 + BURDOCK_LTR LTR Gypsy 1 275 0 1 587 3591 58 59 51 chr2LHet 308152 308675 -60197 + CIRCE LINE Composite 444 970 -5386 1 587 2361 53 0 91 chr2LHet 308817 309169 -59703 + CIRCE LINE Composite 973 1292 -5064 1 587 934 350 52 49 chr2LHet 308951 309269 -59603 + Gypsy12_I LTR Gypsy 2932 3496 -2050 1 587 4214 47 16 32 chr2LHet 309269 309835 -59037 + CIRCE LINE Composite 1323 1879 -4477 1 587 934 350 52 49 chr2LHet 309835 310247 -58625 + Gypsy12_I LTR Gypsy 3497 4232 -1314 1 587 7880 45 14 28 chr2LHet 309916 310947 -57925 + CIRCE LINE Composite 1884 2899 -3457 1 587 2400 87 43 79 chr2LHet 310947 311354 -57518 - Gypsy6A_LTR LTR Gypsy 0 420 1 1 587 18190 115 21 18 chr2LHet 311356 317446 -51426 - Gypsy3_I LTR Gypsy 0 7012 1 1 587 2273 91 58 72 chr2LHet 317446 317847 -51025 - Gypsy6A_LTR LTR Gypsy 0 420 1 1 587 5581 54 5 28 chr2LHet 317848 318632 -50240 + CIRCE LINE Composite 2897 3662 -2694 1 587 1602 52 118 0 chr2LHet 318682 319021 -49851 - STALKER4_LTR LTR Gypsy -23 379 1 1 587 25496 46 11 2 chr2LHet 319021 322935 -45937 - STALKER4_I LTR Gypsy -308 6589 2552 1 587 39542 6 6 3 chr2LHet 322963 327639 -41233 + DOC LINE Jockey 32 4721 -4 1 587 11925 38 25 11 chr2LHet 327638 329291 -39581 - STALKER4_I LTR Gypsy -3980 2550 874 1 587 1814 183 28 35 chr2LHet 329305 329768 -39104 - Stalker2_I LTR Gypsy -6652 750 291 1 587 25 0 0 0 chr2LHet 329792 329817 -39055 + AT_rich Low_complexity Low_complexity 1 25 0 1 587 2920 48 5 0 chr2LHet 329966 330343 -38529 - STALKER4_LTR LTR Gypsy -23 379 1 1 587 2358 114 4 31 chr2LHet 330343 330885 -37987 + CIRCE LINE Composite 3659 4381 -1975 1 587 248 172 17 17 chr2LHet 331116 331175 -37697 + DM176_LTR LTR Gypsy 308 366 -141 1 587 552 148 40 16 chr2LHet 331192 331316 -37556 + DMTOM1_LTR LTR Gypsy 284 410 0 1 587 388 100 14 28 chr2LHet 331316 331379 -37493 + DMTOM1_LTR LTR Gypsy 349 410 0 1 587 305 223 23 83 chr2LHet 331379 331511 -37361 + ROVER-I_DM LTR Gypsy 1 124 -6460 1 587 226 283 8 30 chr2LHet 331630 331761 -37111 + (TAAA)n Simple_repeat Simple_repeat 2 129 0 1 587 278 182 43 43 chr2LHet 331950 332065 -36807 + A-rich Low_complexity Low_complexity 3 117 0 1 587 9263 284 33 26 chr2LHet 332144 336491 -32381 + ROVER-I_DM LTR Gypsy 889 5262 -1322 1 587 1019 146 0 5 chr2LHet 336493 336686 -32186 + DM297_I LTR Gypsy 5490 5681 -486 1 587 766 140 0 53 chr2LHet 336685 336836 -32036 + DM176_I LTR Gypsy 6278 6420 0 1 587 248 172 17 17 chr2LHet 337070 337129 -31743 + DM176_LTR LTR Gypsy 308 366 -141 1 587 552 148 40 16 chr2LHet 337146 337270 -31602 + DMTOM1_LTR LTR Gypsy 284 410 0 1 587 388 100 14 28 chr2LHet 337270 337333 -31539 + DMTOM1_LTR LTR Gypsy 349 410 0 1 587 1109 55 19 107 chr2LHet 337333 337537 -31335 + CIRCE LINE Composite 4372 4557 -1799 1 587 1303 52 0 6 chr2LHet 337539 337713 -31159 + CIRCE LINE Composite 6162 6334 -22 1 587 6234 51 108 30 chr2LHet 337745 338630 -30242 + CIRCE LINE Composite 1 954 -5402 1 587 1165 176 17 53 chr2LHet 338630 338930 -29942 + Gypsy5_LTR LTR Gypsy 1 289 -141 1 587 24 32 0 0 chr2LHet 338963 338994 -29878 + AT_rich Low_complexity Low_complexity 1 31 0 1 587 9380 160 101 87 chr2LHet 339304 342280 -26592 + CIRCE LINE Composite 973 3989 -2367 1 587 1580 25 0 20 chr2LHet 342280 342481 -26391 - ACCORD2_LTR LTR Gypsy 0 215 19 1 587 337 178 11 11 chr2LHet 342475 342566 -26306 + CIRCE LINE Composite 4193 4268 -2088 1 587 4946 14 2 0 chr2LHet 342577 343159 -25713 + DMRT1A LINE R1 4590 5172 -11 1 587 4237 71 43 62 chr2LHet 343158 343898 -24974 + CIRCE LINE Composite 4255 4980 -1376 1 587 20325 42 45 1 chr2LHet 344320 346365 -22507 - ROOA_I LTR Pao -1503 5346 3195 1 587 194 0 0 37 chr2LHet 346365 346392 -22480 + (CATCC)n Simple_repeat Simple_repeat 3 28 0 1 587 20325 42 45 1 chr2LHet 346392 347020 -21852 - ROOA_I LTR Pao -3655 3194 2558 1 587 4577 45 104 0 chr2LHet 347017 347657 -21215 - ROOA_I LTR Pao -4423 2426 1720 1 587 1145 37 98 0 chr2LHet 347657 347821 -21051 + ROO_LTR LTR Pao 1 180 -248 1 587 26862 31 78 15 chr2LHet 347811 352375 -16497 + ROO_I LTR Pao 205 5059 -3197 1 587 16557 18 23 1 chr2LHet 352374 354411 -14461 - FW_DM LINE Jockey -2 4690 2608 1 587 13150 17 3 4 chr2LHet 354407 356009 -12863 - FW_DM LINE Jockey -2206 2486 886 1 587 16419 10 0 0 chr2LHet 355998 357900 -10972 + BS LINE Jockey 3225 5126 0 1 587 3647 13 54 0 chr2LHet 357902 358752 -10120 - FW_DM LINE Jockey -3796 896 1 1 587 3515 39 2 36 chr2LHet 358767 359299 -9573 + ROO_I LTR Pao 7738 8251 -5 1 587 2583 23 0 0 chr2LHet 359296 359606 -9266 + ROO_LTR LTR Pao 119 428 0 1 587 12563 44 10 34 chr2LHet 359608 361373 -7499 - ROOA_I LTR Pao -5127 1722 1 1 587 420 66 49 0 chr2LHet 361403 361464 -7408 - ROOA_LTR LTR Pao -113 273 210 1 587 1374 70 55 0 chr2LHet 361519 361719 -7153 - MAX_LTR LTR Pao -110 211 1 1 587 2680 40 0 0 chr2LHet 361722 362070 -6802 - MAX_I LTR Pao -1 7913 7566 1 587 31528 68 54 19 chr2LHet 362056 366810 -2062 - MAX_I LTR Pao -2848 5066 145 1 587 1592 37 0 52 chr2LHet 366846 367075 -1797 - ROOA_LTR LTR Pao -169 217 1 1 587 860 43 338 4 chr2LHet 367075 367295 -1577 + TRANSIB1 DNA Transib 1371 1667 -1347 1 587 1549 46 5 23 chr2LHet 367283 367504 -1368 + TRANSIB1 DNA Transib 2798 3014 0 1 587 486 126 11 0 chr2LHet 367510 367597 -1275 + DM297_I LTR Gypsy 2878 2965 -3202 1 587 259 222 0 0 chr2LHet 367593 367647 -1225 + DM297_I LTR Gypsy 3117 3170 -2997 1 587 752 186 0 0 chr2LHet 367668 367813 -1059 + DM297_I LTR Gypsy 3288 3432 -2735 1 587 665 129 52 6 chr2LHet 367946 368118 -754 + GA-rich Low_complexity Low_complexity 1 180 0 1 587 208 0 12 122 chr2LHet 368126 368208 -664 + (CAGAGA)n Simple_repeat Simple_repeat 6 78 0 1 587 577 142 59 6 chr2LHet 368199 368369 -503 + GA-rich Low_complexity Low_complexity 1 179 0 1 587 454 0 135 0 chr2LHet 368364 368490 -382 + (GA)n Simple_repeat Simple_repeat 2 144 0 1 587 390 0 6 133 chr2LHet 368490 368663 -209 + (CAGAGA)n Simple_repeat Simple_repeat 6 156 0 1 587 398 130 65 0 chr2LHet 368653 368761 -111 + GA-rich Low_complexity Low_complexity 5 119 0 1 587 259 0 0 133 chr2LHet 368763 368868 -4 + (CAGAGA)n Simple_repeat Simple_repeat 6 96 0 1 585 778 167 7 20 chr2L 1 154 -23011390 + HETRP_DM Satellite Satellite 1519 1669 -203 1 585 296 174 250 42 chr2L 312 408 -23011136 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr2L 456 612 -23010932 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 296 174 250 42 chr2L 770 866 -23010678 + HETRP_DM Satellite Satellite 1519 1634 -238 3 585 787 170 6 19 chr2L 914 1070 -23010474 + HETRP_DM Satellite Satellite 1516 1669 -203 3 585 296 174 250 42 chr2L 1228 1324 -23010220 + HETRP_DM Satellite Satellite 1519 1634 -238 4 585 787 170 6 19 chr2L 1372 1528 -23010016 + HETRP_DM Satellite Satellite 1516 1669 -203 4 585 296 174 250 42 chr2L 1686 1782 -23009762 + HETRP_DM Satellite Satellite 1519 1634 -238 5 585 787 170 6 19 chr2L 1830 1986 -23009558 + HETRP_DM Satellite Satellite 1516 1669 -203 5 585 296 174 250 42 chr2L 2144 2240 -23009304 + HETRP_DM Satellite Satellite 1519 1634 -238 6 585 787 170 6 19 chr2L 2288 2444 -23009100 + HETRP_DM Satellite Satellite 1516 1669 -203 6 585 296 174 250 42 chr2L 2602 2698 -23008846 + HETRP_DM Satellite Satellite 1519 1634 -238 7 585 787 170 6 19 chr2L 2746 2902 -23008642 + HETRP_DM Satellite Satellite 1516 1669 -203 7 585 296 174 250 42 chr2L 3060 3156 -23008388 + HETRP_DM Satellite Satellite 1519 1634 -238 8 585 787 170 6 19 chr2L 3204 3360 -23008184 + HETRP_DM Satellite Satellite 1516 1669 -203 8 585 296 174 250 42 chr2L 3518 3614 -23007930 + HETRP_DM Satellite Satellite 1519 1634 -238 9 585 787 170 6 19 chr2L 3662 3818 -23007726 + HETRP_DM Satellite Satellite 1516 1669 -203 9 585 296 174 250 42 chr2L 3976 4072 -23007472 + HETRP_DM Satellite Satellite 1519 1634 -238 1 585 787 170 6 19 chr2L 4120 4276 -23007268 + HETRP_DM Satellite Satellite 1516 1669 -203 1 585 296 174 250 42 chr2L 4434 4530 -23007014 + HETRP_DM Satellite Satellite 1519 1634 -238 1 585 787 170 6 19 chr2L 4578 4734 -23006810 + HETRP_DM Satellite Satellite 1516 1669 -203 1 585 296 174 250 42 chr2L 4892 4988 -23006556 + HETRP_DM Satellite Satellite 1519 1634 -238 1 585 790 163 6 19 chr2L 5036 5192 -23006352 + HETRP_DM Satellite Satellite 1516 1669 -203 1 585 704 199 0 13 chr2L 5222 5375 -23006169 + HETRP_DM Satellite Satellite 1519 1669 -203 1 585 762 147 13 32 chr2L 5554 5709 -23005835 + HETRP_DM Satellite Satellite 1518 1669 -203 1 585 678 185 69 19 chr2L 5855 6015 -23005529 + HETRP_DM Satellite Satellite 1518 1685 -187 1 585 22 56 0 0 chr2L 6946 6982 -23004562 + AT_rich Low_complexity Low_complexity 1 36 0 1 585 285 235 67 15 chr2L 9725 9859 -23001685 + IDEFIX_LTR LTR Gypsy 425 565 -29 1 585 524 62 1 144 chr2L 9882 9993 -23001551 + DNAREP1_DM LINE Penelope 500 588 -6 1 585 22 0 0 0 chr2L 11049 11071 -23000473 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 362 211 11 0 chr2L 15865 15955 -22995589 + DNAREP1_DM LINE Penelope 504 594 0 1 585 23 78 0 0 chr2L 17215 17266 -22994278 + AT_rich Low_complexity Low_complexity 1 51 0 2 585 24 32 0 0 chr2L 17735 17766 -22993778 + AT_rich Low_complexity Low_complexity 1 31 0 2 585 29 28 0 0 chr2L 18722 18758 -22992786 + AT_rich Low_complexity Low_complexity 1 36 0 2 585 29 60 0 0 chr2L 20023 20073 -22991471 + AT_rich Low_complexity Low_complexity 1 50 0 2 585 24 53 0 0 chr2L 20532 20570 -22990974 + AT_rich Low_complexity Low_complexity 1 38 0 2 585 36 53 0 0 chr2L 21527 21584 -22989960 + AT_rich Low_complexity Low_complexity 1 57 0 2 585 1198 163 60 12 chr2L 24235 24484 -22987060 - DNAREP1_DM LINE Penelope -2 592 332 2 585 23 33 0 0 chr2L 25796 25826 -22985718 + AT_rich Low_complexity Low_complexity 1 30 0 2 585 323 235 215 9 chr2L 27528 27771 -22983773 + DNAREP1_DM LINE Penelope 4 436 -158 2 585 269 212 0 36 chr2L 34984 35067 -22976477 + (TTG)n Simple_repeat Simple_repeat 1 80 0 2 585 24 32 0 0 chr2L 39192 39223 -22972321 + AT_rich Low_complexity Low_complexity 1 31 0 3 585 21 57 0 0 chr2L 44497 44532 -22967012 + AT_rich Low_complexity Low_complexity 1 35 0 3 585 212 59 29 0 chr2L 44563 44597 -22966947 + (TTTTA)n Simple_repeat Simple_repeat 4 38 0 3 585 43675 5 0 0 chr2L 47513 52519 -22959025 + LINEJ1_DM LINE Jockey 2 5007 -13 3 585 234 0 0 0 chr2L 52534 52560 -22958984 + (A)n Simple_repeat Simple_repeat 1 26 0 3 585 28 0 0 0 chr2L 53987 54015 -22957529 + AT_rich Low_complexity Low_complexity 1 28 0 3 585 26 64 0 0 chr2L 54078 54125 -22957419 + AT_rich Low_complexity Low_complexity 1 47 0 3 585 311 42 42 0 chr2L 54433 54481 -22957063 + (TATAA)n Simple_repeat Simple_repeat 2 51 0 3 585 216 0 0 0 chr2L 57570 57594 -22953950 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 585 21 0 0 0 chr2L 60118 60139 -22951405 + AT_rich Low_complexity Low_complexity 1 21 0 3 585 1728 151 55 29 chr2L 60250 60631 -22950913 - DNAREP1_DM LINE Penelope -42 552 162 4 585 518 188 15 23 chr2L 60655 60786 -22950758 - DNAREP1_DM LINE Penelope -268 326 197 4 585 28 0 0 0 chr2L 63513 63541 -22948003 + AT_rich Low_complexity Low_complexity 1 28 0 4 585 4303 64 8 3 chr2L 64315 64914 -22946630 + BS2 LINE Jockey 4120 4721 0 4 585 21 57 0 0 chr2L 65001 65036 -22946508 + AT_rich Low_complexity Low_complexity 1 35 0 4 585 25 31 0 0 chr2L 71344 71376 -22940168 + AT_rich Low_complexity Low_complexity 1 32 0 4 585 22 35 0 0 chr2L 71859 71888 -22939656 + AT_rich Low_complexity Low_complexity 1 29 0 4 585 215 191 24 0 chr2L 80010 80052 -22931492 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 585 23 54 0 0 chr2L 81808 81845 -22929699 + AT_rich Low_complexity Low_complexity 1 37 0 4 585 21 0 0 0 chr2L 85078 85099 -22926445 + AT_rich Low_complexity Low_complexity 1 21 0 4 585 21 57 0 0 chr2L 93340 93375 -22918169 + AT_rich Low_complexity Low_complexity 1 35 0 5 585 22 0 0 0 chr2L 100975 100997 -22910547 + AT_rich Low_complexity Low_complexity 1 22 0 5 585 23 33 0 0 chr2L 105341 105371 -22906173 + AT_rich Low_complexity Low_complexity 1 30 0 5 585 26 30 0 0 chr2L 111691 111724 -22899820 + AT_rich Low_complexity Low_complexity 1 33 0 5 585 209 325 0 13 chr2L 115021 115099 -22896445 + (TATG)n Simple_repeat Simple_repeat 3 79 0 5 585 1898 96 172 10 chr2L 116519 116980 -22894564 - DNAREP1_DM LINE Penelope 0 594 1 5 586 21 71 0 0 chr2L 134247 134289 -22877255 + AT_rich Low_complexity Low_complexity 1 42 0 5 586 24 0 0 0 chr2L 137901 137925 -22873619 + AT_rich Low_complexity Low_complexity 1 24 0 5 586 249 57 0 0 chr2L 138131 138166 -22873378 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 586 226 117 350 0 chr2L 138420 138480 -22873064 - DNAREP1_DM LINE Penelope -83 511 431 5 586 28 0 0 0 chr2L 150282 150310 -22861234 + AT_rich Low_complexity Low_complexity 1 28 0 6 586 22 0 0 0 chr2L 159435 159457 -22852087 + AT_rich Low_complexity Low_complexity 1 22 0 6 586 26 0 0 0 chr2L 160982 161008 -22850536 + AT_rich Low_complexity Low_complexity 1 26 0 6 586 195 42 0 0 chr2L 162899 162923 -22848621 + (CAA)n Simple_repeat Simple_repeat 3 26 0 6 586 219 139 0 0 chr2L 162951 162987 -22848557 + (TAA)n Simple_repeat Simple_repeat 2 37 0 6 586 25 0 0 0 chr2L 163030 163055 -22848489 + AT_rich Low_complexity Low_complexity 1 25 0 6 586 28 61 0 0 chr2L 167436 167485 -22844059 + AT_rich Low_complexity Low_complexity 1 49 0 6 586 23 68 0 0 chr2L 169024 169068 -22842476 + AT_rich Low_complexity Low_complexity 1 44 0 6 586 21 0 0 0 chr2L 171029 171050 -22840494 + AT_rich Low_complexity Low_complexity 1 21 0 6 586 23 0 0 0 chr2L 172065 172088 -22839456 + AT_rich Low_complexity Low_complexity 1 23 0 6 586 24 32 0 0 chr2L 172305 172336 -22839208 + AT_rich Low_complexity Low_complexity 1 31 0 7 586 386 233 8 65 chr2L 172568 172692 -22838852 - DNAREP1_DM LINE Penelope -66 528 412 7 586 250 91 0 0 chr2L 172691 172724 -22838820 - DNAREP1_DM LINE Penelope -537 57 25 7 586 239 167 0 0 chr2L 173742 173778 -22837766 + DNAREP1_DM LINE Penelope 405 440 -154 7 586 26 36 0 51 chr2L 175300 175359 -22836185 + AT_rich Low_complexity Low_complexity 1 56 0 7 586 201 39 0 0 chr2L 176375 176401 -22835143 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 7 586 791 55 0 18 chr2L 176401 176512 -22835032 - I_DM LINE I -772 5459 5351 7 586 28 0 0 0 chr2L 176829 176857 -22834687 + AT_rich Low_complexity Low_complexity 1 28 0 7 586 21 0 0 0 chr2L 177023 177044 -22834500 + AT_rich Low_complexity Low_complexity 1 21 0 7 586 824 189 83 28 chr2L 178183 178401 -22833143 - DNAREP1_DM LINE Penelope -1 593 364 7 586 272 104 208 0 chr2L 178435 178483 -22833061 - DNAREP1_DM LINE Penelope -536 58 1 7 586 22 56 0 0 chr2L 179615 179651 -22831893 + AT_rich Low_complexity Low_complexity 1 36 0 8 586 974 94 46 3 chr2L 179750 180001 -22831543 - DNAREP1_DM LINE Penelope 0 594 213 8 586 219 241 0 0 chr2L 181185 181239 -22830305 + (TTG)n Simple_repeat Simple_repeat 3 56 0 8 586 23 0 0 0 chr2L 182662 182685 -22828859 + AT_rich Low_complexity Low_complexity 1 23 0 8 586 218 246 0 17 chr2L 183524 183582 -22827962 + (TA)n Simple_repeat Simple_repeat 1 57 0 8 586 35 83 0 0 chr2L 187090 187174 -22824370 + AT_rich Low_complexity Low_complexity 1 84 0 8 586 27 29 0 0 chr2L 187257 187291 -22824253 + AT_rich Low_complexity Low_complexity 1 34 0 8 586 299 342 0 39 chr2L 190041 190196 -22821348 + GA-rich Low_complexity Low_complexity 2 150 0 8 586 234 326 6 23 chr2L 195662 195838 -22815706 + (CAG)n Simple_repeat Simple_repeat 1 173 0 8 586 309 348 0 0 chr2L 195917 196072 -22815472 + (CAG)n Simple_repeat Simple_repeat 1 155 0 8 586 240 222 0 0 chr2L 198443 198497 -22813047 + (CAA)n Simple_repeat Simple_repeat 1 54 0 9 586 21 36 0 0 chr2L 202854 202882 -22808662 + AT_rich Low_complexity Low_complexity 1 28 0 9 586 263 93 23 0 chr2L 203340 203383 -22808161 + (TA)n Simple_repeat Simple_repeat 1 44 0 9 586 24 0 0 0 chr2L 206732 206756 -22804788 + AT_rich Low_complexity Low_complexity 1 24 0 9 586 36 0 0 0 chr2L 210735 210771 -22800773 + AT_rich Low_complexity Low_complexity 1 36 0 9 586 239 193 0 0 chr2L 215150 215207 -22796337 - ROO_I LTR Pao -7560 696 640 9 586 24 32 0 0 chr2L 216040 216071 -22795473 + AT_rich Low_complexity Low_complexity 1 31 0 9 586 33 56 0 0 chr2L 218900 218954 -22792590 + AT_rich Low_complexity Low_complexity 1 54 0 9 586 31 88 0 0 chr2L 219250 219330 -22792214 + AT_rich Low_complexity Low_complexity 1 80 0 9 586 27 73 0 0 chr2L 221044 221099 -22790445 + AT_rich Low_complexity Low_complexity 1 55 0 9 586 21 0 0 0 chr2L 225876 225897 -22785647 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 401 192 0 0 chr2L 227202 227280 -22784264 + DNAREP1_DM LINE Penelope 516 593 -1 1 586 252 167 0 0 chr2L 227616 227664 -22783880 + (TGG)n Simple_repeat Simple_repeat 1 48 0 1 586 27 0 0 0 chr2L 228882 228909 -22782635 + AT_rich Low_complexity Low_complexity 1 27 0 1 586 25 0 0 0 chr2L 229708 229733 -22781811 + AT_rich Low_complexity Low_complexity 1 25 0 1 586 21 0 0 0 chr2L 230335 230356 -22781188 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 32 43 0 0 chr2L 231289 231335 -22780209 + AT_rich Low_complexity Low_complexity 1 46 0 1 586 227 261 16 70 chr2L 239480 239608 -22771936 - ROO_I LTR Pao -7495 761 641 1 586 225 330 0 0 chr2L 239708 239811 -22771733 + (TTG)n Simple_repeat Simple_repeat 1 103 0 1 586 291 294 14 14 chr2L 239941 240079 -22771465 + (CTG)n Simple_repeat Simple_repeat 3 140 0 1 586 201 121 0 0 chr2L 240273 240306 -22771238 + (CTG)n Simple_repeat Simple_repeat 1 33 0 1 586 240 152 24 167 chr2L 240400 240526 -22771018 - ROO_I LTR Pao -7509 747 640 1 586 182 143 0 67 chr2L 241068 241113 -22770431 + (CTG)n Simple_repeat Simple_repeat 1 42 0 1 586 191 128 0 60 chr2L 241207 241257 -22770287 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 586 226 178 0 118 chr2L 241564 241666 -22769878 - ROO_I LTR Pao -7527 729 640 1 586 26 64 0 0 chr2L 243986 244033 -22767511 + AT_rich Low_complexity Low_complexity 1 47 0 1 586 203 195 0 24 chr2L 244491 244533 -22767011 + (CATA)n Simple_repeat Simple_repeat 1 41 0 1 586 31 58 0 0 chr2L 247956 248008 -22763536 + AT_rich Low_complexity Low_complexity 1 52 0 1 586 200 337 11 0 chr2L 250521 250610 -22760934 + CT-rich Low_complexity Low_complexity 1 90 0 1 586 37 0 0 0 chr2L 259011 259048 -22752496 + AT_rich Low_complexity Low_complexity 1 37 0 1 586 25 0 0 0 chr2L 261523 261548 -22749996 + AT_rich Low_complexity Low_complexity 1 25 0 1 587 236 292 0 0 chr2L 272158 272223 -22739321 + (TCG)n Simple_repeat Simple_repeat 3 67 0 1 587 30 0 0 0 chr2L 273790 273820 -22737724 + AT_rich Low_complexity Low_complexity 1 30 0 1 587 29 60 0 0 chr2L 276508 276558 -22734986 + AT_rich Low_complexity Low_complexity 1 50 0 1 587 26 0 0 0 chr2L 289251 289277 -22722267 + AT_rich Low_complexity Low_complexity 1 26 0 1 587 180 125 0 0 chr2L 293631 293663 -22717881 + (CCA)n Simple_repeat Simple_repeat 2 33 0 1 587 30 77 0 0 chr2L 294750 294815 -22716729 + AT_rich Low_complexity Low_complexity 1 65 0 1 587 28 71 0 0 chr2L 294900 294956 -22716588 + AT_rich Low_complexity Low_complexity 1 56 0 1 587 23 33 0 0 chr2L 297539 297569 -22713975 + AT_rich Low_complexity Low_complexity 1 30 0 1 587 37 0 0 0 chr2L 298983 299020 -22712524 + AT_rich Low_complexity Low_complexity 1 37 0 1 587 207 0 0 0 chr2L 303134 303157 -22708387 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 587 22 56 0 0 chr2L 303988 304024 -22707520 + AT_rich Low_complexity Low_complexity 1 36 0 1 587 259 65 21 21 chr2L 304624 304671 -22706873 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 1 587 258 116 0 0 chr2L 304933 304976 -22706568 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 587 205 195 0 0 chr2L 308941 308982 -22702562 + (CAGAGA)n Simple_repeat Simple_repeat 6 46 0 1 587 30 0 0 0 chr2L 309585 309615 -22701929 + AT_rich Low_complexity Low_complexity 1 30 0 1 587 22 0 0 0 chr2L 315700 315722 -22695822 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 30 45 0 0 chr2L 317677 317721 -22693823 + AT_rich Low_complexity Low_complexity 1 44 0 1 587 250 309 0 31 chr2L 327970 328067 -22683477 + CT-rich Low_complexity Low_complexity 6 99 0 1 587 281 302 0 70 chr2L 328244 328415 -22683129 + CT-rich Low_complexity Low_complexity 3 161 0 1 587 295 366 0 34 chr2L 330700 330878 -22680666 + T-rich Low_complexity Low_complexity 5 176 0 1 587 515 273 19 0 chr2L 330825 330986 -22680558 + CT-rich Low_complexity Low_complexity 2 165 0 1 587 243 0 0 0 chr2L 335672 335699 -22675845 + (TTCGGG)n Simple_repeat Simple_repeat 4 30 0 1 587 204 188 0 0 chr2L 335881 335913 -22675631 + (CGA)n Simple_repeat Simple_repeat 3 34 0 1 587 21 0 0 0 chr2L 338182 338203 -22673341 + AT_rich Low_complexity Low_complexity 1 21 0 1 587 22 0 0 0 chr2L 338310 338332 -22673212 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 207 100 0 0 chr2L 339350 339380 -22672164 + (CACCAT)n Simple_repeat Simple_repeat 4 33 0 1 587 30 0 0 0 chr2L 342162 342192 -22669352 + AT_rich Low_complexity Low_complexity 1 30 0 1 587 3447 3 45 0 chr2L 347940 348153 -22663391 - BLOOD_LTR LTR Gypsy 0 399 187 1 587 306 0 0 0 chr2L 348153 348187 -22663357 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 587 3447 3 45 0 chr2L 348187 348355 -22663189 - BLOOD_LTR LTR Gypsy -213 186 2 1 587 60509 0 0 0 chr2L 348355 354968 -22656576 - BLOOD_I LTR Gypsy 0 6613 1 1 587 3434 5 45 0 chr2L 354968 355181 -22656363 - BLOOD_LTR LTR Gypsy 0 399 187 1 587 306 0 0 0 chr2L 355181 355215 -22656329 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 587 3434 5 45 0 chr2L 355215 355383 -22656161 - BLOOD_LTR LTR Gypsy -213 186 2 1 587 21 57 0 0 chr2L 358983 359018 -22652526 + AT_rich Low_complexity Low_complexity 1 35 0 1 587 31 0 0 0 chr2L 359440 359471 -22652073 + AT_rich Low_complexity Low_complexity 1 31 0 1 587 1291 297 54 42 chr2L 359499 365912 -22645632 - SAR_DM Satellite Satellite -333 6488 1 1 587 214 266 0 0 chr2L 368739 368803 -22642741 + (CAA)n Simple_repeat Simple_repeat 3 66 0 1 587 24 0 0 0 chr2L 373024 373048 -22638496 + AT_rich Low_complexity Low_complexity 1 24 0 1 587 33 66 0 0 chr2L 374530 374591 -22636953 + AT_rich Low_complexity Low_complexity 1 61 0 1 587 27 29 0 0 chr2L 384457 384491 -22627053 + AT_rich Low_complexity Low_complexity 1 34 0 1 587 24 0 0 0 chr2L 386614 386638 -22624906 + AT_rich Low_complexity Low_complexity 1 24 0 1 587 27 0 0 0 chr2L 390399 390426 -22621118 + AT_rich Low_complexity Low_complexity 1 27 0 1 588 275 239 21 11 chr2L 393255 393348 -22618196 + (CACCAT)n Simple_repeat Simple_repeat 3 96 0 1 588 22 0 0 0 chr2L 393469 393491 -22618053 + AT_rich Low_complexity Low_complexity 1 22 0 1 588 238 250 0 0 chr2L 394454 394498 -22617046 + (TTGGGG)n Simple_repeat Simple_repeat 5 48 0 1 588 26 98 0 0 chr2L 394836 394918 -22616626 + AT_rich Low_complexity Low_complexity 1 82 0 1 588 227 196 20 0 chr2L 408928 408979 -22602565 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1 588 23 54 0 0 chr2L 412269 412306 -22599238 + AT_rich Low_complexity Low_complexity 1 37 0 1 588 213 243 13 13 chr2L 414244 414319 -22597225 + T-rich Low_complexity Low_complexity 3 77 0 1 588 233 254 0 0 chr2L 420423 420478 -22591066 + (CCG)n Simple_repeat Simple_repeat 1 55 0 1 588 186 133 0 0 chr2L 420483 420513 -22591031 + (GGAGAA)n Simple_repeat Simple_repeat 5 34 0 1 588 23 0 0 0 chr2L 421644 421667 -22589877 + AT_rich Low_complexity Low_complexity 1 23 0 1 588 29 0 0 0 chr2L 421711 421740 -22589804 + AT_rich Low_complexity Low_complexity 1 29 0 1 588 180 0 0 0 chr2L 423599 423619 -22587925 + (GGA)n Simple_repeat Simple_repeat 3 22 0 1 588 23 33 0 0 chr2L 435070 435100 -22576444 + AT_rich Low_complexity Low_complexity 1 30 0 1 588 26 50 0 0 chr2L 435672 435712 -22575832 + AT_rich Low_complexity Low_complexity 1 40 0 1 588 243 61 0 0 chr2L 438877 438910 -22572634 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 588 27 29 0 0 chr2L 440989 441023 -22570521 + AT_rich Low_complexity Low_complexity 1 34 0 1 588 24 0 0 0 chr2L 441102 441126 -22570418 + AT_rich Low_complexity Low_complexity 1 24 0 1 588 207 243 0 0 chr2L 441414 441451 -22570093 + C-rich Low_complexity Low_complexity 5 41 0 1 588 204 40 0 0 chr2L 447208 447233 -22564311 + (CAG)n Simple_repeat Simple_repeat 2 26 0 1 588 222 128 0 0 chr2L 448479 448518 -22563026 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 588 23 0 0 0 chr2L 448519 448542 -22563002 + AT_rich Low_complexity Low_complexity 1 23 0 1 588 402 226 43 0 chr2L 451599 451692 -22559852 + DNAREP1_DM LINE Penelope 384 480 -114 1 588 21 36 0 0 chr2L 451736 451764 -22559780 + AT_rich Low_complexity Low_complexity 1 28 0 1 588 27 29 0 0 chr2L 452300 452334 -22559210 + AT_rich Low_complexity Low_complexity 1 34 0 1 588 311 167 25 37 chr2L 457787 457868 -22553676 + ROO_I LTR Pao 647 726 -7530 1 588 192 77 0 0 chr2L 464640 464666 -22546878 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 588 186 103 0 0 chr2L 464804 464833 -22546711 + (CTG)n Simple_repeat Simple_repeat 3 31 0 1 588 25 0 0 0 chr2L 469936 469961 -22541583 + AT_rich Low_complexity Low_complexity 1 25 0 1 588 203 261 31 0 chr2L 470241 470306 -22541238 + (CATA)n Simple_repeat Simple_repeat 1 67 0 1 588 28 0 0 0 chr2L 471355 471383 -22540161 + AT_rich Low_complexity Low_complexity 1 28 0 1 588 225 211 0 53 chr2L 471532 471607 -22539937 + T-rich Low_complexity Low_complexity 2 72 0 1 588 23 68 0 0 chr2L 472859 472903 -22538641 + AT_rich Low_complexity Low_complexity 1 44 0 1 588 207 100 0 0 chr2L 473373 473403 -22538141 + (CAG)n Simple_repeat Simple_repeat 1 30 0 1 588 208 273 0 0 chr2L 474407 474462 -22537082 + (CAG)n Simple_repeat Simple_repeat 1 55 0 1 588 21 36 0 0 chr2L 474865 474893 -22536651 + AT_rich Low_complexity Low_complexity 1 28 0 1 588 200 111 28 0 chr2L 482102 482138 -22529406 + (TATATG)n Simple_repeat Simple_repeat 5 41 0 1 588 399 73 0 0 chr2L 487052 487107 -22524437 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 588 420 97 0 0 chr2L 490721 490783 -22520761 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 588 216 186 0 0 chr2L 492920 492963 -22518581 + (TTG)n Simple_repeat Simple_repeat 1 43 0 2 588 201 268 0 18 chr2L 493172 493229 -22518315 + (CAA)n Simple_repeat Simple_repeat 3 58 0 2 588 23 0 0 0 chr2L 493469 493492 -22518052 + AT_rich Low_complexity Low_complexity 1 23 0 2 588 24 53 0 0 chr2L 493876 493914 -22517630 + AT_rich Low_complexity Low_complexity 1 38 0 2 588 25 0 0 0 chr2L 495050 495075 -22516469 + AT_rich Low_complexity Low_complexity 1 25 0 2 588 24 0 0 0 chr2L 499586 499610 -22511934 + AT_rich Low_complexity Low_complexity 1 24 0 2 588 192 40 0 0 chr2L 501837 501862 -22509682 + (GA)n Simple_repeat Simple_repeat 1 25 0 2 588 240 122 0 0 chr2L 501945 501986 -22509558 + (CATCC)n Simple_repeat Simple_repeat 5 45 0 2 588 225 119 0 0 chr2L 503953 503995 -22507549 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 588 25 31 0 0 chr2L 508783 508815 -22502729 + AT_rich Low_complexity Low_complexity 1 32 0 2 588 198 0 0 0 chr2L 510683 510705 -22500839 + (TC)n Simple_repeat Simple_repeat 2 23 0 2 588 204 118 29 0 chr2L 510773 510807 -22500737 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 588 25 0 0 0 chr2L 512203 512228 -22499316 + AT_rich Low_complexity Low_complexity 1 25 0 2 588 196 170 19 19 chr2L 516485 516539 -22495005 + (TTG)n Simple_repeat Simple_repeat 3 56 0 2 588 297 89 0 0 chr2L 516679 516724 -22494820 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 588 207 0 0 0 chr2L 521304 521327 -22490217 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 588 203 139 0 44 chr2L 521806 521851 -22489693 + (CAA)n Simple_repeat Simple_repeat 1 43 0 2 588 192 40 0 0 chr2L 521929 521954 -22489590 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2 588 240 35 0 0 chr2L 523254 523283 -22488261 + (TTGG)n Simple_repeat Simple_repeat 2 30 0 2 589 203 218 0 52 chr2L 526645 526703 -22484841 + CT-rich Low_complexity Low_complexity 3 57 0 2 589 243 103 0 0 chr2L 527499 527538 -22484006 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 589 217 156 67 0 chr2L 527840 527885 -22483659 + (CCGAA)n Simple_repeat Simple_repeat 4 51 0 2 589 207 0 0 0 chr2L 528772 528795 -22482749 + (ATG)n Simple_repeat Simple_repeat 3 25 0 2 589 21 0 0 0 chr2L 529333 529354 -22482190 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 222 91 0 0 chr2L 531296 531329 -22480215 + (CTG)n Simple_repeat Simple_repeat 3 35 0 2 589 238 301 19 0 chr2L 531623 531726 -22479818 - ROO_I LTR Pao -7513 743 639 2 589 201 238 0 0 chr2L 531878 531920 -22479624 + (CAG)n Simple_repeat Simple_repeat 3 44 0 2 589 23 68 0 0 chr2L 534207 534251 -22477293 + AT_rich Low_complexity Low_complexity 1 44 0 2 589 263 286 0 0 chr2L 534890 534960 -22476584 + (CAG)n Simple_repeat Simple_repeat 3 72 0 2 589 21 57 0 0 chr2L 540510 540545 -22470999 + AT_rich Low_complexity Low_complexity 1 35 0 2 589 207 167 0 0 chr2L 547269 547305 -22464239 + (TGGG)n Simple_repeat Simple_repeat 1 36 0 2 589 259 160 0 0 chr2L 548270 548320 -22463224 + (CATATA)n Simple_repeat Simple_repeat 6 55 0 2 589 261 57 0 0 chr2L 549054 549089 -22462455 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 589 22 0 0 0 chr2L 553059 553081 -22458463 + AT_rich Low_complexity Low_complexity 1 22 0 2 589 21 0 0 0 chr2L 569318 569339 -22442205 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 21 0 0 0 chr2L 574360 574381 -22437163 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 249 57 0 0 chr2L 578794 578829 -22432715 + (CAG)n Simple_repeat Simple_repeat 1 35 0 2 589 180 125 0 0 chr2L 579589 579621 -22431923 + (CGAAA)n Simple_repeat Simple_repeat 1 32 0 2 589 22 70 0 0 chr2L 582102 582145 -22429399 + AT_rich Low_complexity Low_complexity 1 43 0 2 589 313 274 0 17 chr2L 584296 584411 -22427133 + (CTG)n Simple_repeat Simple_repeat 2 114 0 2 589 28 0 0 0 chr2L 588951 588979 -22422565 + AT_rich Low_complexity Low_complexity 1 28 0 2 589 218 209 0 0 chr2L 590231 590274 -22421270 + (CAATC)n Simple_repeat Simple_repeat 4 46 0 2 589 266 231 15 0 chr2L 594896 594961 -22416583 + CT-rich Low_complexity Low_complexity 2 67 0 2 589 25 0 0 0 chr2L 596786 596811 -22414733 + AT_rich Low_complexity Low_complexity 1 25 0 2 589 198 103 0 0 chr2L 597107 597136 -22414408 + (TC)n Simple_repeat Simple_repeat 1 29 0 2 589 21 0 0 0 chr2L 598456 598477 -22413067 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 22 70 0 0 chr2L 599228 599271 -22412273 + AT_rich Low_complexity Low_complexity 1 43 0 2 589 189 0 0 0 chr2L 600008 600029 -22411515 + (CAG)n Simple_repeat Simple_repeat 1 21 0 2 589 23 33 0 0 chr2L 601014 601044 -22410500 + AT_rich Low_complexity Low_complexity 1 30 0 2 589 32 81 0 0 chr2L 602338 602412 -22409132 + AT_rich Low_complexity Low_complexity 1 74 0 2 589 23 33 0 0 chr2L 602628 602658 -22408886 + AT_rich Low_complexity Low_complexity 1 30 0 2 589 240 111 0 0 chr2L 605230 605266 -22406278 + (CAG)n Simple_repeat Simple_repeat 3 38 0 2 589 193 77 0 71 chr2L 606856 606898 -22404646 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 589 222 241 0 17 chr2L 610501 610560 -22400984 + T-rich Low_complexity Low_complexity 3 60 0 2 589 21 0 0 0 chr2L 611144 611165 -22400379 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 21 110 0 0 chr2L 612948 613039 -22398505 + AT_rich Low_complexity Low_complexity 1 91 0 2 589 21 0 0 0 chr2L 614829 614850 -22396694 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 189 0 0 0 chr2L 620097 620118 -22391426 + (GA)n Simple_repeat Simple_repeat 1 21 0 2 589 564 198 23 23 chr2L 626541 626717 -22384827 + A-rich Low_complexity Low_complexity 2 177 0 2 589 598 184 47 6 chr2L 626744 626914 -22384630 + A-rich Low_complexity Low_complexity 2 178 0 2 589 533 189 11 44 chr2L 626946 627129 -22384415 + A-rich Low_complexity Low_complexity 2 178 0 2 589 678 207 0 17 chr2L 627158 627335 -22384209 + A-rich Low_complexity Low_complexity 4 177 0 2 589 644 209 41 12 chr2L 627345 627662 -22383882 + GA-rich Low_complexity Low_complexity 1 326 0 2 589 695 193 11 17 chr2L 627687 627866 -22383678 + A-rich Low_complexity Low_complexity 2 179 0 2 589 22 0 0 0 chr2L 628160 628182 -22383362 + AT_rich Low_complexity Low_complexity 1 22 0 2 589 202 132 0 36 chr2L 630934 630989 -22380555 + (CAG)n Simple_repeat Simple_repeat 1 53 0 2 589 26 50 0 0 chr2L 632368 632408 -22379136 + AT_rich Low_complexity Low_complexity 1 40 0 2 589 271 214 0 0 chr2L 634189 634245 -22377299 + DNAREP1_DM LINE Penelope 1 56 -538 2 589 23 33 0 0 chr2L 634245 634275 -22377269 + AT_rich Low_complexity Low_complexity 1 30 0 2 589 255 103 0 0 chr2L 634752 634791 -22376753 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 589 38 39 0 0 chr2L 635549 635601 -22375943 + AT_rich Low_complexity Low_complexity 1 52 0 2 589 276 120 0 0 chr2L 636092 636142 -22375402 + (CTG)n Simple_repeat Simple_repeat 1 50 0 2 589 22 0 0 0 chr2L 638268 638290 -22373254 + AT_rich Low_complexity Low_complexity 1 22 0 2 589 198 0 0 0 chr2L 638956 638978 -22372566 + (TTG)n Simple_repeat Simple_repeat 3 24 0 2 589 23 0 0 0 chr2L 639317 639340 -22372204 + AT_rich Low_complexity Low_complexity 1 23 0 2 589 24 0 0 0 chr2L 640014 640038 -22371506 + AT_rich Low_complexity Low_complexity 1 24 0 2 589 180 111 0 0 chr2L 652727 652754 -22358790 + (CATCC)n Simple_repeat Simple_repeat 5 31 0 2 590 201 195 0 0 chr2L 659096 659137 -22352407 + (TATG)n Simple_repeat Simple_repeat 1 41 0 2 590 184 30 61 0 chr2L 659598 659631 -22351913 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 590 21 0 0 0 chr2L 660685 660706 -22350838 + AT_rich Low_complexity Low_complexity 1 21 0 2 590 228 217 0 0 chr2L 670105 670151 -22341393 + CT-rich Low_complexity Low_complexity 4 49 0 2 590 236 171 0 0 chr2L 671662 671703 -22339841 + (CTG)n Simple_repeat Simple_repeat 1 41 0 2 590 229 241 0 33 chr2L 671910 671970 -22339574 + CT-rich Low_complexity Low_complexity 2 59 0 2 590 28 0 0 0 chr2L 677190 677218 -22334326 + AT_rich Low_complexity Low_complexity 1 28 0 2 590 180 219 0 0 chr2L 678023 678064 -22333480 + (CAGAGA)n Simple_repeat Simple_repeat 3 43 0 2 590 25 31 0 0 chr2L 679336 679368 -22332176 + AT_rich Low_complexity Low_complexity 1 32 0 2 590 192 40 0 0 chr2L 685332 685357 -22326187 + (CAG)n Simple_repeat Simple_repeat 3 27 0 2 590 255 125 0 0 chr2L 685459 685499 -22326045 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 590 3974 5 0 0 chr2L 686973 687401 -22324143 - ROO_LTR LTR Pao 0 428 1 2 590 70893 1 4 0 chr2L 687401 695527 -22316017 - ROO_I LTR Pao 0 8256 1 2 590 3974 5 0 0 chr2L 695527 695955 -22315589 - ROO_LTR LTR Pao 0 428 1 2 590 180 152 0 0 chr2L 701754 701787 -22309757 + GA-rich Low_complexity Low_complexity 2 34 0 2 590 207 0 0 0 chr2L 702008 702031 -22309513 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 590 23 33 0 0 chr2L 708747 708777 -22302767 + AT_rich Low_complexity Low_complexity 1 30 0 2 590 23 33 0 0 chr2L 712015 712045 -22299499 + AT_rich Low_complexity Low_complexity 1 30 0 2 590 207 0 0 0 chr2L 713791 713814 -22297730 + (TTTC)n Simple_repeat Simple_repeat 4 26 0 2 590 191 105 0 50 chr2L 717470 717510 -22294034 + (GGCTG)n Simple_repeat Simple_repeat 3 40 0 2 590 202 237 0 33 chr2L 718410 718471 -22293073 + (TCG)n Simple_repeat Simple_repeat 3 61 0 2 590 23 0 0 0 chr2L 719527 719550 -22291994 + AT_rich Low_complexity Low_complexity 1 23 0 2 590 22 35 0 0 chr2L 721974 722003 -22289541 + AT_rich Low_complexity Low_complexity 1 29 0 2 590 227 171 60 12 chr2L 730241 730324 -22281220 + (GGATG)n Simple_repeat Simple_repeat 4 90 0 2 590 240 111 0 0 chr2L 734008 734044 -22277500 + (CGA)n Simple_repeat Simple_repeat 1 36 0 2 590 26 50 0 0 chr2L 746208 746248 -22265296 + AT_rich Low_complexity Low_complexity 1 40 0 2 590 244 219 0 0 chr2L 746597 746661 -22264883 + (TTGG)n Simple_repeat Simple_repeat 3 66 0 3 590 204 122 0 0 chr2L 747236 747277 -22264267 + (CAT)n Simple_repeat Simple_repeat 1 41 0 3 590 189 0 0 0 chr2L 756306 756327 -22255217 + (T)n Simple_repeat Simple_repeat 1 21 0 3 590 198 0 0 0 chr2L 762347 762369 -22249175 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 3 590 197 122 0 47 chr2L 763979 764022 -22247522 + A-rich Low_complexity Low_complexity 4 44 0 3 590 22 0 0 0 chr2L 768688 768710 -22242834 + AT_rich Low_complexity Low_complexity 1 22 0 3 590 273 98 0 0 chr2L 768902 768943 -22242601 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 590 15878 1 0 0 chr2L 770515 772243 -22239301 - BARI_DM DNA Tc1 0 1728 1 3 590 225 214 0 0 chr2L 777195 777237 -22234307 + (ATGGTG)n Simple_repeat Simple_repeat 5 46 0 3 590 232 234 0 0 chr2L 779468 779532 -22232012 + (CCA)n Simple_repeat Simple_repeat 3 66 0 3 590 210 37 0 0 chr2L 780882 780909 -22230635 + (TCC)n Simple_repeat Simple_repeat 3 29 0 3 590 817 300 58 37 chr2L 782976 784256 -22227288 - SAR_DM Satellite Satellite -667 1307 1 3 591 21 36 0 0 chr2L 791559 791587 -22219957 + AT_rich Low_complexity Low_complexity 1 28 0 3 591 291 93 0 0 chr2L 796558 796601 -22214943 + (ACTG)n Simple_repeat Simple_repeat 4 46 0 3 591 216 97 0 0 chr2L 796607 796638 -22214906 + (CGGA)n Simple_repeat Simple_repeat 3 33 0 3 591 243 61 0 0 chr2L 797007 797040 -22214504 + (CGAAT)n Simple_repeat Simple_repeat 3 35 0 3 591 207 216 0 0 chr2L 797939 797976 -22213568 + (CACCAT)n Simple_repeat Simple_repeat 4 40 0 3 591 180 0 0 0 chr2L 800557 800577 -22210967 + (TCC)n Simple_repeat Simple_repeat 2 21 0 3 591 180 77 0 0 chr2L 806963 806989 -22204555 + (GGA)n Simple_repeat Simple_repeat 3 28 0 3 591 342 0 0 0 chr2L 811450 811488 -22200056 + (TTA)n Simple_repeat Simple_repeat 3 40 0 3 591 197 33 0 32 chr2L 826566 826597 -22184947 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 591 240 192 0 0 chr2L 829591 829643 -22181901 + (CAG)n Simple_repeat Simple_repeat 3 54 0 3 591 218 350 0 0 chr2L 829855 829935 -22181609 + (CGG)n Simple_repeat Simple_repeat 1 80 0 3 591 254 73 24 0 chr2L 832425 832466 -22179078 + (ATATG)n Simple_repeat Simple_repeat 4 45 0 3 591 236 219 16 0 chr2L 833941 834005 -22177539 + (TATATG)n Simple_repeat Simple_repeat 3 67 0 3 591 195 42 0 0 chr2L 835084 835108 -22176436 + (CTG)n Simple_repeat Simple_repeat 1 24 0 3 591 216 67 0 0 chr2L 835186 835216 -22176328 + (CTG)n Simple_repeat Simple_repeat 1 30 0 3 591 246 116 0 0 chr2L 836620 836663 -22174881 + (CTG)n Simple_repeat Simple_repeat 1 43 0 3 591 237 211 0 0 chr2L 837882 837934 -22173610 + (CAA)n Simple_repeat Simple_repeat 1 52 0 3 591 216 0 0 0 chr2L 841291 841315 -22170229 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 591 27 49 0 0 chr2L 847249 847290 -22164254 + AT_rich Low_complexity Low_complexity 1 41 0 3 591 225 65 0 0 chr2L 847738 847769 -22163775 + (CTCTG)n Simple_repeat Simple_repeat 3 33 0 3 591 185 0 40 0 chr2L 847867 847892 -22163652 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 3 591 180 77 0 0 chr2L 850952 850978 -22160566 + (CGAAA)n Simple_repeat Simple_repeat 1 26 0 3 591 201 132 0 0 chr2L 868413 868451 -22143093 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 591 22 56 0 0 chr2L 868486 868522 -22143022 + AT_rich Low_complexity Low_complexity 1 36 0 3 591 216 0 0 0 chr2L 872992 873016 -22138528 + (TCG)n Simple_repeat Simple_repeat 1 24 0 3 591 212 222 0 0 chr2L 873946 873982 -22137562 + (CCG)n Simple_repeat Simple_repeat 2 37 0 3 591 216 111 0 0 chr2L 876503 876539 -22135005 + (CAA)n Simple_repeat Simple_repeat 2 37 0 3 591 24 32 0 0 chr2L 880921 880952 -22130592 + AT_rich Low_complexity Low_complexity 1 31 0 3 591 183 129 0 0 chr2L 887490 887521 -22124023 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 3 591 180 0 0 0 chr2L 888092 888112 -22123432 + (AAATG)n Simple_repeat Simple_repeat 3 22 0 3 591 28 29 0 0 chr2L 890329 890364 -22121180 + AT_rich Low_complexity Low_complexity 1 35 0 3 591 237 33 0 0 chr2L 895142 895172 -22116372 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 591 212 59 29 0 chr2L 902369 902403 -22109141 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 3 591 192 40 0 0 chr2L 904530 904555 -22106989 + (GGA)n Simple_repeat Simple_repeat 2 26 0 3 591 192 40 0 0 chr2L 908511 908536 -22103008 + (TGGA)n Simple_repeat Simple_repeat 3 27 0 3 592 28 48 0 0 chr2L 917754 917796 -22093748 + AT_rich Low_complexity Low_complexity 1 42 0 3 592 28 0 0 0 chr2L 921816 921844 -22089700 + AT_rich Low_complexity Low_complexity 1 28 0 3 592 27 87 0 0 chr2L 922095 922164 -22089380 + AT_rich Low_complexity Low_complexity 1 69 0 3 592 225 128 0 0 chr2L 923070 923117 -22088427 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 592 242 148 19 0 chr2L 925953 926007 -22085537 + (CTG)n Simple_repeat Simple_repeat 2 56 0 3 592 231 61 0 0 chr2L 926066 926099 -22085445 + (CAGAC)n Simple_repeat Simple_repeat 5 37 0 3 592 198 0 0 0 chr2L 929145 929167 -22082377 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 592 183 100 0 0 chr2L 932440 932470 -22079074 + (CGG)n Simple_repeat Simple_repeat 2 31 0 3 592 246 22 64 21 chr2L 933364 933411 -22078133 + (TTTTTG)n Simple_repeat Simple_repeat 5 53 0 3 592 294 182 0 0 chr2L 935651 935717 -22075827 + GA-rich Low_complexity Low_complexity 2 67 0 3 592 274 43 0 60 chr2L 938133 938183 -22073361 + (CAG)n Simple_repeat Simple_repeat 1 47 0 3 592 210 154 0 0 chr2L 939978 940017 -22071527 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 592 302 325 17 0 chr2L 941047 941167 -22070377 + (CAGAGA)n Simple_repeat Simple_repeat 4 125 0 3 592 243 88 0 0 chr2L 941938 941972 -22069572 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 592 28 0 0 0 chr2L 942927 942955 -22068589 + AT_rich Low_complexity Low_complexity 1 28 0 3 592 338 219 9 28 chr2L 945204 945312 -22066232 + (CA)n Simple_repeat Simple_repeat 1 106 0 3 592 197 182 18 0 chr2L 946358 946413 -22065131 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 592 180 0 0 0 chr2L 950678 950698 -22060846 + (A)n Simple_repeat Simple_repeat 1 20 0 3 592 226 291 0 0 chr2L 952871 952957 -22058587 + (CAG)n Simple_repeat Simple_repeat 3 88 0 3 592 506 299 43 48 chr2L 955568 955986 -22055558 + SAR_DM Satellite Satellite 457 872 -600 3 592 191 36 0 35 chr2L 961197 961226 -22050318 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 592 218 264 0 0 chr2L 964257 964310 -22047234 + (CAGA)n Simple_repeat Simple_repeat 4 56 0 3 592 192 40 0 0 chr2L 968659 968684 -22042860 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 592 195 184 0 0 chr2L 970263 970301 -22041243 + (CATA)n Simple_repeat Simple_repeat 2 39 0 3 592 180 97 0 0 chr2L 973415 973446 -22038098 + (CAG)n Simple_repeat Simple_repeat 1 31 0 3 592 30 27 0 0 chr2L 975537 975574 -22035970 + AT_rich Low_complexity Low_complexity 1 37 0 3 592 826 258 63 35 chr2L 975644 976054 -22035490 - SAR_DM Satellite Satellite -551 921 198 3 592 3968 5 0 0 chr2L 976934 977362 -22034182 + ROO_LTR LTR Pao 1 428 0 3 592 54257 1 14 1 chr2L 977362 983449 -22028095 + ROO_I LTR Pao 1 6166 -2090 3 592 5412 5 19 0 chr2L 983447 984084 -22027460 + ROO_I LTR Pao 7608 8256 0 3 592 3968 5 0 0 chr2L 984084 984512 -22027032 + ROO_LTR LTR Pao 1 428 0 3 592 180 0 0 0 chr2L 984991 985011 -22026533 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 592 25 51 0 0 chr2L 991281 991320 -22020224 + AT_rich Low_complexity Low_complexity 1 39 0 3 592 3968 5 0 0 chr2L 996779 997207 -22014337 - ROO_LTR LTR Pao 0 428 1 3 592 25047 3 4 0 chr2L 997207 1000000 -22011544 - ROO_I LTR Pao 0 8256 5452 3 592 48234 0 12 0 chr2L 1000000 1005388 -22006156 - ROO_I LTR Pao -2805 5451 1 3 592 3968 5 0 0 chr2L 1005388 1005816 -22005728 - ROO_LTR LTR Pao 0 428 1 3 592 27 0 0 0 chr2L 1005823 1005850 -22005694 + AT_rich Low_complexity Low_complexity 1 27 0 3 592 24 53 0 0 chr2L 1006885 1006923 -22004621 + AT_rich Low_complexity Low_complexity 1 38 0 3 592 235 277 0 0 chr2L 1007644 1007709 -22003835 + (TGG)n Simple_repeat Simple_repeat 3 67 0 3 592 222 180 20 20 chr2L 1007912 1007963 -22003581 + (CATAC)n Simple_repeat Simple_repeat 4 54 0 3 592 192 77 0 0 chr2L 1010054 1010080 -22001464 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 592 22 0 0 0 chr2L 1011541 1011563 -21999981 + AT_rich Low_complexity Low_complexity 1 22 0 3 592 267 122 0 0 chr2L 1014013 1014062 -21997482 + (TTCTCC)n Simple_repeat Simple_repeat 3 51 0 3 592 23 0 0 0 chr2L 1014492 1014515 -21997029 + AT_rich Low_complexity Low_complexity 1 23 0 3 592 203 171 0 0 chr2L 1016941 1016982 -21994562 + (CTG)n Simple_repeat Simple_repeat 2 42 0 3 592 247 209 15 0 chr2L 1019650 1019717 -21991827 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 592 189 0 0 0 chr2L 1023058 1023079 -21988465 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 592 189 171 0 0 chr2L 1031666 1031701 -21979843 + (CCCCAG)n Simple_repeat Simple_repeat 1 35 0 3 592 23 0 0 0 chr2L 1032718 1032741 -21978803 + AT_rich Low_complexity Low_complexity 1 23 0 3 592 200 200 0 0 chr2L 1033976 1034026 -21977518 + (CTG)n Simple_repeat Simple_repeat 1 50 0 3 592 195 139 0 0 chr2L 1038246 1038282 -21973262 + (CGA)n Simple_repeat Simple_repeat 3 38 0 3 592 228 67 0 0 chr2L 1048240 1048270 -21963274 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 592 21 36 0 0 chr2L 1048456 1048484 -21963060 + AT_rich Low_complexity Low_complexity 1 28 0 3 593 28 0 0 0 chr2L 1051231 1051259 -21960285 + AT_rich Low_complexity Low_complexity 1 28 0 4 593 25 0 0 0 chr2L 1054363 1054388 -21957156 + AT_rich Low_complexity Low_complexity 1 25 0 4 593 190 0 32 32 chr2L 1057240 1057271 -21954273 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 593 192 77 0 0 chr2L 1061022 1061048 -21950496 + (A)n Simple_repeat Simple_repeat 1 26 0 4 593 246 116 0 0 chr2L 1061422 1061465 -21950079 + (TGG)n Simple_repeat Simple_repeat 2 44 0 4 593 208 265 41 0 chr2L 1062461 1062510 -21949034 + (CCCGAA)n Simple_repeat Simple_repeat 3 53 0 4 593 183 100 0 0 chr2L 1068203 1068233 -21943311 + (ATG)n Simple_repeat Simple_repeat 1 30 0 4 593 21 89 0 0 chr2L 1070479 1070535 -21941009 + AT_rich Low_complexity Low_complexity 1 56 0 4 593 195 69 0 0 chr2L 1071306 1071335 -21940209 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 4 593 189 0 0 0 chr2L 1071369 1071390 -21940154 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 4 593 180 200 0 0 chr2L 1071514 1071564 -21939980 + CT-rich Low_complexity Low_complexity 2 51 0 4 593 204 148 49 0 chr2L 1077438 1077499 -21934045 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 593 28 29 0 0 chr2L 1080774 1080809 -21930735 + AT_rich Low_complexity Low_complexity 1 35 0 4 593 303 122 0 0 chr2L 1083371 1083420 -21928124 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 593 23 0 0 0 chr2L 1084862 1084885 -21926659 + AT_rich Low_complexity Low_complexity 1 23 0 4 593 23 0 0 0 chr2L 1091006 1091029 -21920515 + AT_rich Low_complexity Low_complexity 1 23 0 4 593 226 211 0 34 chr2L 1093045 1093104 -21918440 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 4 593 183 80 0 0 chr2L 1096125 1096150 -21915394 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 593 192 40 0 0 chr2L 1102613 1102638 -21908906 + (CAG)n Simple_repeat Simple_repeat 3 27 0 4 593 207 69 0 0 chr2L 1108100 1108129 -21903415 + (TTG)n Simple_repeat Simple_repeat 1 29 0 4 593 249 194 41 14 chr2L 1114728 1114801 -21896743 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 4 593 23 0 0 0 chr2L 1116034 1116057 -21895487 + AT_rich Low_complexity Low_complexity 1 23 0 4 593 225 0 0 0 chr2L 1117593 1117618 -21893926 + (TAGG)n Simple_repeat Simple_repeat 2 26 0 4 593 198 208 0 0 chr2L 1125686 1125734 -21885810 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 4 593 230 171 98 0 chr2L 1128252 1128334 -21883210 - BS LINE Jockey -3017 2109 2020 4 593 22 56 0 0 chr2L 1129111 1129147 -21882397 + AT_rich Low_complexity Low_complexity 1 36 0 4 593 21 0 0 0 chr2L 1134215 1134236 -21877308 + AT_rich Low_complexity Low_complexity 1 21 0 4 593 31 26 0 0 chr2L 1134268 1134306 -21877238 + AT_rich Low_complexity Low_complexity 1 38 0 4 593 483 82 0 0 chr2L 1134999 1135072 -21876472 + (CAG)n Simple_repeat Simple_repeat 1 73 0 4 593 39 38 0 0 chr2L 1135593 1135646 -21875898 + AT_rich Low_complexity Low_complexity 1 53 0 4 593 212 312 0 12 chr2L 1135901 1135982 -21875562 + (CGTG)n Simple_repeat Simple_repeat 3 82 0 4 593 216 0 0 0 chr2L 1137167 1137191 -21874353 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 593 195 100 0 0 chr2L 1140697 1140727 -21870817 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 593 222 256 41 16 chr2L 1140864 1140987 -21870557 + (TA)n Simple_repeat Simple_repeat 2 127 0 4 593 23 0 0 0 chr2L 1141826 1141849 -21869695 + AT_rich Low_complexity Low_complexity 1 23 0 4 593 253 196 0 18 chr2L 1145192 1145249 -21866295 + DNAREP1_DM LINE Penelope 539 594 0 4 593 24 53 0 0 chr2L 1151680 1151718 -21859826 + AT_rich Low_complexity Low_complexity 1 38 0 4 593 25 83 0 0 chr2L 1158576 1158636 -21852908 + AT_rich Low_complexity Low_complexity 1 60 0 4 593 29 0 0 0 chr2L 1169967 1169996 -21841548 + AT_rich Low_complexity Low_complexity 1 29 0 4 593 203 314 0 29 chr2L 1176309 1176414 -21835130 + GA-rich Low_complexity Low_complexity 2 103 0 4 594 294 273 0 52 chr2L 1181204 1181320 -21830224 + GA-rich Low_complexity Low_complexity 6 115 0 4 594 291 71 0 0 chr2L 1186180 1186222 -21825322 + (TGG)n Simple_repeat Simple_repeat 3 44 0 4 594 188 172 0 17 chr2L 1186507 1186566 -21824978 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 594 22 0 0 0 chr2L 1191153 1191175 -21820369 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 246 62 0 0 chr2L 1197306 1197338 -21814206 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 594 186 118 0 0 chr2L 1197929 1197963 -21813581 + (GGA)n Simple_repeat Simple_repeat 2 35 0 4 594 229 326 6 22 chr2L 1200249 1200428 -21811116 + (CACAC)n Simple_repeat Simple_repeat 3 178 0 4 594 213 39 0 0 chr2L 1201456 1201482 -21810062 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 4 594 180 234 0 0 chr2L 1202299 1202346 -21809198 + (CTGGGG)n Simple_repeat Simple_repeat 1 47 0 4 594 189 107 0 0 chr2L 1202513 1202541 -21809003 + (CAGT)n Simple_repeat Simple_repeat 4 31 0 4 594 21 0 0 0 chr2L 1206230 1206251 -21805293 + AT_rich Low_complexity Low_complexity 1 21 0 4 594 216 0 0 0 chr2L 1212430 1212454 -21799090 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 594 192 40 0 0 chr2L 1214004 1214029 -21797515 + (T)n Simple_repeat Simple_repeat 1 25 0 4 594 321 294 34 24 chr2L 1216534 1216740 -21794804 + XDMR Unknown Unknown 149 356 -5 4 594 502 291 36 28 chr2L 1216629 1216877 -21794667 - SAR_DM Satellite Satellite -1000 472 223 4 594 21 0 0 0 chr2L 1217720 1217741 -21793803 + AT_rich Low_complexity Low_complexity 1 21 0 4 594 22 0 0 0 chr2L 1218298 1218320 -21793224 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 3767 0 0 0 chr2L 1220183 1220582 -21790962 + BLOOD_LTR LTR Gypsy 1 399 0 4 594 53179 0 0 0 chr2L 1220582 1227193 -21784351 + BLOOD_I LTR Gypsy 1 6613 0 4 594 3766 0 0 0 chr2L 1227193 1227592 -21783952 + BLOOD_LTR LTR Gypsy 1 399 0 4 594 189 147 0 0 chr2L 1229627 1229661 -21781883 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 594 22 0 0 0 chr2L 1231021 1231043 -21780501 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 35 63 0 0 chr2L 1231716 1231779 -21779765 + AT_rich Low_complexity Low_complexity 1 63 0 4 594 303 104 0 0 chr2L 1236263 1236311 -21775233 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 4 594 207 69 0 0 chr2L 1236879 1236908 -21774636 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 594 21 0 0 0 chr2L 1242967 1242988 -21768556 + AT_rich Low_complexity Low_complexity 1 21 0 4 594 189 74 0 0 chr2L 1244147 1244174 -21767370 + (TCC)n Simple_repeat Simple_repeat 1 27 0 4 594 22 35 0 0 chr2L 1247026 1247055 -21764489 + AT_rich Low_complexity Low_complexity 1 29 0 4 594 249 136 0 43 chr2L 1247227 1247296 -21764248 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 594 282 56 0 0 chr2L 1249934 1249970 -21761574 + (CAAAC)n Simple_repeat Simple_repeat 5 40 0 4 594 29 0 0 0 chr2L 1254378 1254407 -21757137 + AT_rich Low_complexity Low_complexity 1 29 0 4 594 212 158 0 0 chr2L 1256765 1256803 -21754741 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 594 207 162 0 0 chr2L 1258308 1258345 -21753199 + (TATG)n Simple_repeat Simple_repeat 1 37 0 4 594 22 35 0 0 chr2L 1258916 1258945 -21752599 + AT_rich Low_complexity Low_complexity 1 29 0 4 594 195 42 0 0 chr2L 1259199 1259223 -21752321 + (CTCGG)n Simple_repeat Simple_repeat 3 26 0 4 594 216 111 0 0 chr2L 1261578 1261614 -21749930 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 4 594 235 128 202 71 chr2L 1274647 1274731 -21736813 - XDMR_DM Unknown Unknown -258 102 8 4 594 562 267 73 11 chr2L 1274659 1274932 -21736612 + SAR_DM Satellite Satellite 595 884 -588 4 594 240 59 0 0 chr2L 1278226 1278260 -21733284 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 594 237 33 0 0 chr2L 1279795 1279825 -21731719 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 594 22 0 0 0 chr2L 1284970 1284992 -21726552 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 216 0 0 0 chr2L 1292949 1292973 -21718571 + (CAG)n Simple_repeat Simple_repeat 2 25 0 4 594 201 147 0 0 chr2L 1301116 1301150 -21710394 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 594 4445 4 2 2 chr2L 1301806 1302288 -21709256 - Gypsy_LTR LTR Gypsy 0 482 1 4 594 207 238 9 73 chr2L 1302617 1302726 -21708818 + (TTTG)n Simple_repeat Simple_repeat 2 103 0 4 594 24 0 0 0 chr2L 1302783 1302807 -21708737 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 24 0 0 0 chr2L 1303032 1303056 -21708488 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 26 0 0 0 chr2L 1303928 1303954 -21707590 + AT_rich Low_complexity Low_complexity 1 26 0 4 74 1469 293 70 42 chr2L 1310409 1311747 -21699797 - SAR_DM Satellite Satellite -241 1374 1 4 595 200 286 0 0 chr2L 1314222 1314264 -21697280 + (TTGGGG)n Simple_repeat Simple_repeat 1 42 0 4 595 21 57 0 0 chr2L 1320928 1320963 -21690581 + AT_rich Low_complexity Low_complexity 1 35 0 4 595 195 100 0 0 chr2L 1326149 1326179 -21685365 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 595 42 36 0 0 chr2L 1332086 1332142 -21679402 + AT_rich Low_complexity Low_complexity 1 56 0 4 595 186 171 0 0 chr2L 1332445 1332486 -21679058 + CT-rich Low_complexity Low_complexity 2 42 0 4 595 309 51 0 0 chr2L 1333145 1333184 -21678360 + (ATG)n Simple_repeat Simple_repeat 1 39 0 4 595 24 0 0 0 chr2L 1335660 1335684 -21675860 + AT_rich Low_complexity Low_complexity 1 24 0 4 595 245 29 29 0 chr2L 1341761 1341795 -21669749 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 595 249 98 0 0 chr2L 1342276 1342317 -21669227 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 595 23 54 0 0 chr2L 1343851 1343888 -21667656 + AT_rich Low_complexity Low_complexity 1 37 0 4 595 26 74 0 0 chr2L 1344224 1344278 -21667266 + AT_rich Low_complexity Low_complexity 1 54 0 4 595 23 33 0 0 chr2L 1345557 1345587 -21665957 + AT_rich Low_complexity Low_complexity 1 30 0 5 595 24 0 0 0 chr2L 1346386 1346410 -21665134 + AT_rich Low_complexity Low_complexity 1 24 0 5 595 23 0 0 0 chr2L 1346470 1346493 -21665051 + AT_rich Low_complexity Low_complexity 1 23 0 5 595 180 0 0 0 chr2L 1346763 1346783 -21664761 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 595 201 284 0 36 chr2L 1349756 1349840 -21661704 + (TGGG)n Simple_repeat Simple_repeat 2 82 0 5 595 25 0 0 0 chr2L 1362193 1362218 -21649326 + AT_rich Low_complexity Low_complexity 1 25 0 5 595 23 0 0 0 chr2L 1362618 1362641 -21648903 + AT_rich Low_complexity Low_complexity 1 23 0 5 595 194 207 17 0 chr2L 1367124 1367182 -21644362 + (CATA)n Simple_repeat Simple_repeat 1 59 0 5 595 261 98 0 0 chr2L 1375673 1375714 -21635830 + (CAGAA)n Simple_repeat Simple_repeat 1 41 0 5 595 204 125 0 0 chr2L 1378197 1378229 -21633315 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 595 21 0 0 0 chr2L 1380888 1380909 -21630635 + AT_rich Low_complexity Low_complexity 1 21 0 5 595 213 167 0 0 chr2L 1382358 1382412 -21629132 + (CTG)n Simple_repeat Simple_repeat 1 54 0 5 595 202 200 0 0 chr2L 1382459 1382499 -21629045 + (CTG)n Simple_repeat Simple_repeat 1 40 0 5 595 216 213 16 32 chr2L 1383488 1383551 -21627993 + (TTA)n Simple_repeat Simple_repeat 2 63 0 5 595 22 0 0 0 chr2L 1396187 1396209 -21615335 + AT_rich Low_complexity Low_complexity 1 22 0 5 595 24 32 0 0 chr2L 1396449 1396480 -21615064 + AT_rich Low_complexity Low_complexity 1 31 0 5 595 23 0 0 0 chr2L 1398094 1398117 -21613427 + AT_rich Low_complexity Low_complexity 1 23 0 5 595 180 200 0 0 chr2L 1398435 1398480 -21613064 + (TTG)n Simple_repeat Simple_repeat 1 45 0 5 595 240 35 0 0 chr2L 1406048 1406077 -21605467 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 595 228 35 0 0 chr2L 1407061 1407090 -21604454 + (CTG)n Simple_repeat Simple_repeat 2 30 0 5 595 216 67 0 0 chr2L 1407979 1408009 -21603535 + (CAG)n Simple_repeat Simple_repeat 3 32 0 5 595 189 147 0 0 chr2L 1408863 1408897 -21602647 + (CTG)n Simple_repeat Simple_repeat 3 36 0 5 595 201 133 0 0 chr2L 1409208 1409238 -21602306 + (CAG)n Simple_repeat Simple_repeat 3 32 0 5 595 269 51 26 0 chr2L 1411888 1411927 -21599617 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 595 221 227 0 0 chr2L 1412181 1412225 -21599319 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 595 192 97 0 0 chr2L 1413210 1413241 -21598303 + (CAG)n Simple_repeat Simple_repeat 2 32 0 5 595 195 152 0 0 chr2L 1413913 1413959 -21597585 + (GCTG)n Simple_repeat Simple_repeat 3 48 0 5 595 284 260 0 14 chr2L 1415704 1415778 -21595766 + (TTG)n Simple_repeat Simple_repeat 3 75 0 5 595 243 152 0 0 chr2L 1415982 1416028 -21595516 + (CGAAT)n Simple_repeat Simple_repeat 3 48 0 5 595 195 42 0 0 chr2L 1417073 1417097 -21594447 + (CATTG)n Simple_repeat Simple_repeat 3 26 0 5 595 208 147 0 0 chr2L 1418221 1418255 -21593289 + (A)n Simple_repeat Simple_repeat 1 34 0 5 595 215 325 0 0 chr2L 1420025 1420108 -21591436 + T-rich Low_complexity Low_complexity 5 87 0 5 595 27 0 0 0 chr2L 1423559 1423586 -21587958 + AT_rich Low_complexity Low_complexity 1 27 0 5 595 270 160 0 0 chr2L 1425401 1425451 -21586093 + (ATG)n Simple_repeat Simple_repeat 2 51 0 5 595 200 200 0 0 chr2L 1430756 1430796 -21580748 + (TTG)n Simple_repeat Simple_repeat 1 40 0 5 596 27 29 0 0 chr2L 1443328 1443362 -21568182 + AT_rich Low_complexity Low_complexity 1 34 0 5 596 22 0 0 0 chr2L 1448638 1448660 -21562884 + AT_rich Low_complexity Low_complexity 1 22 0 5 596 240 86 0 0 chr2L 1449396 1449431 -21562113 + (CATCC)n Simple_repeat Simple_repeat 5 39 0 5 596 192 135 0 0 chr2L 1450423 1450460 -21561084 + (CGAAT)n Simple_repeat Simple_repeat 4 40 0 5 596 249 273 0 0 chr2L 1456787 1456853 -21554691 + (TCTCTG)n Simple_repeat Simple_repeat 6 71 0 5 596 214 128 0 41 chr2L 1459303 1459352 -21552192 + (GGATG)n Simple_repeat Simple_repeat 4 50 0 5 596 189 196 0 0 chr2L 1467084 1467135 -21544409 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 596 252 59 0 0 chr2L 1467924 1467958 -21543586 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 596 23 0 0 0 chr2L 1484007 1484030 -21527514 + AT_rich Low_complexity Low_complexity 1 23 0 5 596 22 0 0 0 chr2L 1484888 1484910 -21526634 + AT_rich Low_complexity Low_complexity 1 22 0 5 596 24 0 0 0 chr2L 1486507 1486531 -21525013 + AT_rich Low_complexity Low_complexity 1 24 0 5 596 21 0 0 0 chr2L 1487907 1487928 -21523616 + AT_rich Low_complexity Low_complexity 1 21 0 5 596 183 42 0 0 chr2L 1490779 1490803 -21520741 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 5 596 30 0 0 0 chr2L 1491216 1491246 -21520298 + AT_rich Low_complexity Low_complexity 1 30 0 5 596 24 77 0 0 chr2L 1491789 1491841 -21519703 + AT_rich Low_complexity Low_complexity 1 52 0 5 596 23 33 0 0 chr2L 1492105 1492135 -21519409 + AT_rich Low_complexity Low_complexity 1 30 0 5 596 21 36 0 0 chr2L 1495409 1495437 -21516107 + AT_rich Low_complexity Low_complexity 1 28 0 5 596 261 98 0 0 chr2L 1498754 1498795 -21512749 + (CTG)n Simple_repeat Simple_repeat 3 43 0 5 596 327 85 0 0 chr2L 1499030 1499077 -21512467 + (CTG)n Simple_repeat Simple_repeat 3 49 0 5 596 394 214 0 0 chr2L 1499276 1499379 -21512165 - ROO_I LTR Pao -7513 743 641 5 596 21 0 0 0 chr2L 1508137 1508158 -21503386 + AT_rich Low_complexity Low_complexity 1 21 0 5 596 31 0 0 0 chr2L 1512460 1512491 -21499053 + AT_rich Low_complexity Low_complexity 1 31 0 5 596 21 36 0 0 chr2L 1517528 1517556 -21493988 + AT_rich Low_complexity Low_complexity 1 28 0 5 596 307 20 59 20 chr2L 1522075 1522126 -21489418 + (TTATA)n Simple_repeat Simple_repeat 5 57 0 5 596 282 116 0 0 chr2L 1529747 1529790 -21481754 + (TTCCG)n Simple_repeat Simple_repeat 3 45 0 5 596 22 35 0 0 chr2L 1535223 1535252 -21476292 + AT_rich Low_complexity Low_complexity 1 29 0 5 596 23 0 0 0 chr2L 1536119 1536142 -21475402 + AT_rich Low_complexity Low_complexity 1 23 0 5 596 208 191 29 29 chr2L 1536273 1536343 -21475201 + (CCAA)n Simple_repeat Simple_repeat 3 72 0 5 596 29 78 0 0 chr2L 1536558 1536622 -21474922 + AT_rich Low_complexity Low_complexity 1 64 0 5 596 27 0 0 0 chr2L 1537112 1537139 -21474405 + AT_rich Low_complexity Low_complexity 1 27 0 5 596 180 0 0 0 chr2L 1538983 1539003 -21472541 + (TTAG)n Simple_repeat Simple_repeat 1 20 0 5 596 231 88 0 0 chr2L 1539013 1539047 -21472497 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 596 22 0 0 0 chr2L 1543125 1543147 -21468397 + AT_rich Low_complexity Low_complexity 1 22 0 5 596 26 0 0 0 chr2L 1544362 1544388 -21467156 + AT_rich Low_complexity Low_complexity 1 26 0 5 596 185 94 0 30 chr2L 1544990 1545023 -21466521 + (AAATG)n Simple_repeat Simple_repeat 3 34 0 5 596 23 54 0 0 chr2L 1546223 1546260 -21465284 + AT_rich Low_complexity Low_complexity 1 37 0 5 596 213 139 0 0 chr2L 1548047 1548090 -21463454 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 5 596 45 34 0 0 chr2L 1554631 1554690 -21456854 + AT_rich Low_complexity Low_complexity 1 59 0 5 596 189 0 0 0 chr2L 1556934 1556955 -21454589 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 5 596 21 0 0 0 chr2L 1557116 1557137 -21454407 + AT_rich Low_complexity Low_complexity 1 21 0 5 596 488 45 15 0 chr2L 1558586 1558653 -21452891 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 596 23 33 0 0 chr2L 1563762 1563792 -21447752 + AT_rich Low_complexity Low_complexity 1 30 0 5 596 21 0 0 0 chr2L 1564484 1564505 -21447039 + AT_rich Low_complexity Low_complexity 1 21 0 5 596 22 0 0 0 chr2L 1564925 1564947 -21446597 + AT_rich Low_complexity Low_complexity 1 22 0 5 74 25956 1 0 0 chr2L 1570744 1573553 -21437991 + FW_DM LINE Jockey 1884 4692 0 5 597 210 261 0 42 chr2L 1573883 1573955 -21437589 + CT-rich Low_complexity Low_complexity 4 72 0 5 597 24 32 0 0 chr2L 1576309 1576340 -21435204 + AT_rich Low_complexity Low_complexity 1 31 0 5 597 22 0 0 0 chr2L 1593375 1593397 -21418147 + AT_rich Low_complexity Low_complexity 1 22 0 5 597 24 32 0 0 chr2L 1598545 1598576 -21412968 + AT_rich Low_complexity Low_complexity 1 31 0 5 597 22 0 0 0 chr2L 1599168 1599190 -21412354 + GC_rich Low_complexity Low_complexity 1 22 0 5 597 206 250 0 0 chr2L 1602592 1602644 -21408900 + (CAA)n Simple_repeat Simple_repeat 1 52 0 5 597 240 299 13 0 chr2L 1604420 1604497 -21407047 + (GCTG)n Simple_repeat Simple_repeat 2 79 0 5 597 235 259 0 0 chr2L 1605275 1605333 -21406211 + (CGG)n Simple_repeat Simple_repeat 1 58 0 5 597 495 128 0 0 chr2L 1606633 1606719 -21404825 + (CAG)n Simple_repeat Simple_repeat 1 86 0 5 597 227 209 0 118 chr2L 1606950 1607069 -21404475 + ROO_I LTR Pao 641 745 -7511 5 597 195 114 0 0 chr2L 1607137 1607172 -21404372 + (CAG)n Simple_repeat Simple_repeat 2 36 0 5 597 198 0 0 0 chr2L 1617340 1617362 -21394182 + (CCTG)n Simple_repeat Simple_repeat 3 24 0 5 597 227 152 0 42 chr2L 1617766 1617814 -21393730 + (CTCG)n Simple_repeat Simple_repeat 2 47 0 5 597 180 125 0 0 chr2L 1617989 1618021 -21393523 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 597 2179 0 0 4 chr2L 1618308 1618557 -21392987 - LINEJ1_DM LINE Jockey -13 5007 4760 5 597 23 0 0 0 chr2L 1619300 1619323 -21392221 + AT_rich Low_complexity Low_complexity 1 23 0 5 597 203 256 0 0 chr2L 1619659 1619698 -21391846 + polypyrimidine Low_complexity Low_complexity 2 40 0 5 597 430 105 0 34 chr2L 1625567 1625656 -21385888 + (CAG)n Simple_repeat Simple_repeat 3 88 0 5 597 22 0 0 0 chr2L 1626187 1626209 -21385335 + AT_rich Low_complexity Low_complexity 1 22 0 5 597 198 0 0 0 chr2L 1626913 1626935 -21384609 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 597 198 118 0 0 chr2L 1627213 1627247 -21384297 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 597 218 196 0 19 chr2L 1629204 1629256 -21382288 + CT-rich Low_complexity Low_complexity 2 52 0 6 597 187 146 18 18 chr2L 1629527 1629583 -21381961 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 597 22 35 0 0 chr2L 1632312 1632341 -21379203 + AT_rich Low_complexity Low_complexity 1 29 0 6 597 420 97 0 0 chr2L 1634785 1634847 -21376697 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 6 597 26 50 0 0 chr2L 1641887 1641927 -21369617 + AT_rich Low_complexity Low_complexity 1 40 0 6 597 25 31 0 0 chr2L 1642540 1642572 -21368972 + AT_rich Low_complexity Low_complexity 1 32 0 6 597 26 30 0 0 chr2L 1643403 1643436 -21368108 + AT_rich Low_complexity Low_complexity 1 33 0 6 597 22 80 0 0 chr2L 1644321 1644371 -21367173 + AT_rich Low_complexity Low_complexity 1 50 0 6 597 24 53 0 0 chr2L 1646044 1646082 -21365462 + AT_rich Low_complexity Low_complexity 1 38 0 6 597 240 35 0 0 chr2L 1646344 1646373 -21365171 + (CAT)n Simple_repeat Simple_repeat 1 29 0 6 597 285 51 0 0 chr2L 1648891 1648930 -21362614 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 597 213 208 21 0 chr2L 1648930 1648978 -21362566 + (CAG)n Simple_repeat Simple_repeat 1 49 0 6 597 258 271 12 0 chr2L 1649042 1649127 -21362417 + (CA)n Simple_repeat Simple_repeat 2 87 0 6 597 37 52 0 0 chr2L 1649415 1649473 -21362071 + AT_rich Low_complexity Low_complexity 1 58 0 6 597 33 25 0 0 chr2L 1649748 1649788 -21361756 + AT_rich Low_complexity Low_complexity 1 40 0 6 597 207 0 0 0 chr2L 1650014 1650037 -21361507 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 597 203 158 0 0 chr2L 1651160 1651198 -21360346 + CT-rich Low_complexity Low_complexity 2 39 0 6 597 252 59 0 0 chr2L 1652137 1652171 -21359373 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 597 21 0 0 0 chr2L 1652639 1652660 -21358884 + AT_rich Low_complexity Low_complexity 1 21 0 6 597 269 135 19 0 chr2L 1653346 1653398 -21358146 + (CAA)n Simple_repeat Simple_repeat 3 55 0 6 597 21 57 0 0 chr2L 1653511 1653546 -21357998 + AT_rich Low_complexity Low_complexity 1 35 0 6 597 203 175 0 0 chr2L 1654207 1654247 -21357297 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 597 201 74 0 0 chr2L 1654558 1654585 -21356959 + (TTG)n Simple_repeat Simple_repeat 3 29 0 6 597 23 0 0 0 chr2L 1654717 1654740 -21356804 + AT_rich Low_complexity Low_complexity 1 23 0 6 597 25 51 0 0 chr2L 1656505 1656544 -21355000 + AT_rich Low_complexity Low_complexity 1 39 0 6 597 206 233 0 0 chr2L 1658323 1658366 -21353178 + GA-rich Low_complexity Low_complexity 2 44 0 6 597 206 178 22 0 chr2L 1660166 1660211 -21351333 + T-rich Low_complexity Low_complexity 4 49 0 6 597 192 152 0 0 chr2L 1661538 1661571 -21349973 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 6 597 22 0 0 0 chr2L 1662697 1662719 -21348825 + AT_rich Low_complexity Low_complexity 1 22 0 6 597 263 193 0 12 chr2L 1663250 1663334 -21348210 + GA-rich Low_complexity Low_complexity 1 83 0 6 597 381 123 0 0 chr2L 1663489 1663554 -21347990 + (ATG)n Simple_repeat Simple_repeat 3 67 0 6 597 204 130 21 42 chr2L 1663765 1663813 -21347731 + (GTGTG)n Simple_repeat Simple_repeat 2 48 0 6 597 239 79 26 0 chr2L 1664974 1665012 -21346532 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 597 214 250 0 42 chr2L 1665589 1665660 -21345884 + A-rich Low_complexity Low_complexity 2 69 0 6 597 22 35 0 0 chr2L 1665824 1665853 -21345691 + AT_rich Low_complexity Low_complexity 1 29 0 6 597 28 61 0 0 chr2L 1666746 1666795 -21344749 + AT_rich Low_complexity Low_complexity 1 49 0 6 597 195 100 0 0 chr2L 1672089 1672119 -21339425 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 597 180 77 0 0 chr2L 1672245 1672271 -21339273 + (T)n Simple_repeat Simple_repeat 1 26 0 6 597 189 0 0 0 chr2L 1673034 1673055 -21338489 + (T)n Simple_repeat Simple_repeat 1 21 0 6 597 226 217 41 55 chr2L 1678109 1678182 -21333362 - TART LINE telomeric -6143 8334 8263 6 597 3749 2 0 0 chr2L 1679031 1679430 -21332114 + BLOOD_LTR LTR Gypsy 1 399 0 6 597 60266 0 1 0 chr2L 1679430 1686040 -21325504 + BLOOD_I LTR Gypsy 1 6613 0 6 597 3749 2 0 0 chr2L 1686040 1686439 -21325105 + BLOOD_LTR LTR Gypsy 1 399 0 6 597 186 71 0 0 chr2L 1690431 1690459 -21321085 + (CAG)n Simple_repeat Simple_repeat 1 28 0 6 597 195 42 0 0 chr2L 1691091 1691115 -21320429 + (CAATC)n Simple_repeat Simple_repeat 3 26 0 6 597 210 37 0 0 chr2L 1691320 1691347 -21320197 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 597 189 0 0 0 chr2L 1692890 1692911 -21318633 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 597 186 171 0 0 chr2L 1696089 1696130 -21315414 + (CAG)n Simple_repeat Simple_repeat 3 43 0 6 597 238 254 0 0 chr2L 1696488 1696555 -21314989 + (CCA)n Simple_repeat Simple_repeat 1 67 0 6 597 216 0 0 0 chr2L 1697300 1697324 -21314220 + (CAAAC)n Simple_repeat Simple_repeat 5 28 0 6 597 23 0 0 0 chr2L 1697983 1698006 -21313538 + AT_rich Low_complexity Low_complexity 1 23 0 6 597 23 33 0 0 chr2L 1698394 1698424 -21313120 + AT_rich Low_complexity Low_complexity 1 30 0 6 597 231 208 19 0 chr2L 1699625 1699678 -21311866 + (CAGT)n Simple_repeat Simple_repeat 3 56 0 6 597 28 0 0 0 chr2L 1702687 1702715 -21308829 + AT_rich Low_complexity Low_complexity 1 28 0 6 597 24 32 0 0 chr2L 1703323 1703354 -21308190 + AT_rich Low_complexity Low_complexity 1 31 0 6 597 211 125 25 0 chr2L 1703664 1703704 -21307840 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 598 21 36 0 0 chr2L 1706360 1706388 -21305156 + AT_rich Low_complexity Low_complexity 1 28 0 6 598 2448 4 0 0 chr2L 1711410 1711677 -21299867 - MDG3_LTR LTR Gypsy 0 267 1 6 598 186 43 0 0 chr2L 1716372 1716395 -21295149 + (CTAA)n Simple_repeat Simple_repeat 2 24 0 6 598 180 0 0 0 chr2L 1719243 1719263 -21292281 + (TATAG)n Simple_repeat Simple_repeat 1 20 0 6 598 24 0 0 0 chr2L 1721534 1721558 -21289986 + AT_rich Low_complexity Low_complexity 1 24 0 6 598 26 0 0 0 chr2L 1726994 1727020 -21284524 + AT_rich Low_complexity Low_complexity 1 26 0 6 598 23 33 0 0 chr2L 1727893 1727923 -21283621 + AT_rich Low_complexity Low_complexity 1 30 0 6 598 21 36 0 0 chr2L 1727964 1727992 -21283552 + AT_rich Low_complexity Low_complexity 1 28 0 6 598 30 0 0 0 chr2L 1733107 1733137 -21278407 + AT_rich Low_complexity Low_complexity 1 30 0 6 598 183 80 0 0 chr2L 1734316 1734341 -21277203 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 6 598 27 49 0 0 chr2L 1744049 1744090 -21267454 + AT_rich Low_complexity Low_complexity 1 41 0 6 598 216 67 0 0 chr2L 1749137 1749167 -21262377 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 598 24 53 0 0 chr2L 1752188 1752226 -21259318 + AT_rich Low_complexity Low_complexity 1 38 0 6 598 222 62 0 0 chr2L 1756983 1757015 -21254529 + (TTGG)n Simple_repeat Simple_repeat 3 34 0 6 598 23 0 0 0 chr2L 1787125 1787148 -21224396 + AT_rich Low_complexity Low_complexity 1 23 0 6 598 21 0 0 0 chr2L 1798495 1798516 -21213028 + AT_rich Low_complexity Low_complexity 1 21 0 6 598 2452 4 0 0 chr2L 1801272 1801539 -21210005 - MDG3_LTR LTR Gypsy 0 267 1 6 598 45771 2 0 0 chr2L 1801539 1806526 -21205018 - MDG3_I LTR Gypsy 0 4986 1 6 598 2452 4 0 0 chr2L 1806525 1806792 -21204752 - MDG3_LTR LTR Gypsy 0 267 1 6 598 21 0 0 0 chr2L 1815116 1815137 -21196407 + AT_rich Low_complexity Low_complexity 1 21 0 6 598 183 42 0 0 chr2L 1816567 1816591 -21194953 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 6 598 38 22 0 0 chr2L 1820166 1820211 -21191333 + AT_rich Low_complexity Low_complexity 1 45 0 6 598 202 278 19 0 chr2L 1828310 1828364 -21183180 + (CGA)n Simple_repeat Simple_repeat 2 56 0 6 598 24 0 0 0 chr2L 1833662 1833686 -21177858 + AT_rich Low_complexity Low_complexity 1 24 0 6 598 21 57 0 0 chr2L 1833759 1833794 -21177750 + AT_rich Low_complexity Low_complexity 1 35 0 6 599 24 0 0 0 chr2L 1836918 1836942 -21174602 + AT_rich Low_complexity Low_complexity 1 24 0 6 599 207 114 0 0 chr2L 1842081 1842116 -21169428 + (TCCCG)n Simple_repeat Simple_repeat 3 37 0 6 599 32 81 0 0 chr2L 1844812 1844886 -21166658 + AT_rich Low_complexity Low_complexity 1 74 0 6 599 216 0 0 0 chr2L 1854038 1854062 -21157482 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 599 21 36 0 0 chr2L 1857983 1858011 -21153533 + AT_rich Low_complexity Low_complexity 1 28 0 6 599 212 175 25 0 chr2L 1861081 1861121 -21150423 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 599 243 88 0 0 chr2L 1877307 1877341 -21134203 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 599 204 163 0 0 chr2L 1879178 1879221 -21132323 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 599 211 154 0 25 chr2L 1880398 1880438 -21131106 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 599 218 279 0 0 chr2L 1880717 1880785 -21130759 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 6 599 183 129 0 0 chr2L 1880821 1880852 -21130692 + (ATG)n Simple_repeat Simple_repeat 2 32 0 6 599 26 30 0 0 chr2L 1883416 1883449 -21128095 + AT_rich Low_complexity Low_complexity 1 33 0 6 599 38 75 0 0 chr2L 1884221 1884301 -21127243 + AT_rich Low_complexity Low_complexity 1 80 0 6 599 32 57 0 0 chr2L 1884326 1884379 -21127165 + AT_rich Low_complexity Low_complexity 1 53 0 6 599 213 227 0 0 chr2L 1884736 1884780 -21126764 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 599 223 319 11 11 chr2L 1885008 1885100 -21126444 + (CGTG)n Simple_repeat Simple_repeat 3 94 0 6 599 198 0 0 0 chr2L 1890240 1890262 -21121282 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 599 32 26 0 0 chr2L 1890666 1890705 -21120839 + AT_rich Low_complexity Low_complexity 1 39 0 6 599 29 0 0 0 chr2L 1892587 1892616 -21118928 + AT_rich Low_complexity Low_complexity 1 29 0 6 599 22 56 0 0 chr2L 1904227 1904263 -21107281 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 210 143 0 0 chr2L 1905437 1905472 -21106072 + (CAA)n Simple_repeat Simple_repeat 1 35 0 7 599 23 0 0 0 chr2L 1905938 1905961 -21105583 + AT_rich Low_complexity Low_complexity 1 23 0 7 599 24 0 0 0 chr2L 1909625 1909649 -21101895 + AT_rich Low_complexity Low_complexity 1 24 0 7 599 22 0 0 0 chr2L 1912409 1912431 -21099113 + AT_rich Low_complexity Low_complexity 1 22 0 7 599 210 362 8 8 chr2L 1913498 1913615 -21097929 + (CCG)n Simple_repeat Simple_repeat 1 117 0 7 599 213 39 0 0 chr2L 1918152 1918178 -21093366 + (CAGTT)n Simple_repeat Simple_repeat 5 30 0 7 599 186 118 0 0 chr2L 1926461 1926495 -21085049 + (ATGGTG)n Simple_repeat Simple_repeat 3 36 0 7 599 26 74 0 0 chr2L 1929617 1929671 -21081873 + AT_rich Low_complexity Low_complexity 1 54 0 7 599 22 35 0 0 chr2L 1930498 1930527 -21081017 + AT_rich Low_complexity Low_complexity 1 29 0 7 599 25 0 0 0 chr2L 1933415 1933440 -21078104 + AT_rich Low_complexity Low_complexity 1 25 0 7 599 198 91 0 0 chr2L 1937808 1937841 -21073703 + (A)n Simple_repeat Simple_repeat 1 33 0 7 599 192 77 0 0 chr2L 1939238 1939264 -21072280 + (CAG)n Simple_repeat Simple_repeat 1 26 0 7 599 189 0 0 0 chr2L 1948193 1948214 -21063330 + (TCCA)n Simple_repeat Simple_repeat 2 22 0 7 599 273 98 0 0 chr2L 1955045 1955086 -21056458 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 7 599 22 0 0 0 chr2L 1956939 1956961 -21054583 + AT_rich Low_complexity Low_complexity 1 22 0 7 599 24 0 0 0 chr2L 1962692 1962716 -21048828 + AT_rich Low_complexity Low_complexity 1 24 0 7 599 22 56 0 0 chr2L 1964231 1964267 -21047277 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 189 74 0 0 chr2L 1964399 1964426 -21047118 + (CAA)n Simple_repeat Simple_repeat 3 29 0 7 600 381 22 0 0 chr2L 1975716 1975762 -21035782 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 600 189 94 0 0 chr2L 1976635 1976667 -21034877 + (CTG)n Simple_repeat Simple_repeat 1 32 0 7 600 246 204 0 0 chr2L 1978713 1978762 -21032782 + (CTG)n Simple_repeat Simple_repeat 3 51 0 7 600 241 269 0 0 chr2L 1979036 1979114 -21032430 + (CTG)n Simple_repeat Simple_repeat 2 79 0 7 600 28 71 0 0 chr2L 1988109 1988165 -21023379 + AT_rich Low_complexity Low_complexity 1 56 0 7 600 22 0 0 0 chr2L 1988913 1988935 -21022609 + AT_rich Low_complexity Low_complexity 1 22 0 7 600 186 71 0 0 chr2L 1989917 1989945 -21021599 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 600 25 75 0 0 chr2L 1990890 1990943 -21020601 + AT_rich Low_complexity Low_complexity 1 53 0 7 600 245 137 39 0 chr2L 1991144 1991195 -21020349 + A-rich Low_complexity Low_complexity 2 54 0 7 600 25 31 0 0 chr2L 1992992 1993024 -21018520 + AT_rich Low_complexity Low_complexity 1 32 0 7 600 25 0 0 0 chr2L 1995079 1995104 -21016440 + AT_rich Low_complexity Low_complexity 1 25 0 7 600 22 35 0 0 chr2L 1995654 1995683 -21015861 + AT_rich Low_complexity Low_complexity 1 29 0 7 600 27 0 0 0 chr2L 2009614 2009641 -21001903 + AT_rich Low_complexity Low_complexity 1 27 0 7 600 28 61 0 0 chr2L 2010780 2010829 -21000715 + AT_rich Low_complexity Low_complexity 1 49 0 7 600 21 82 0 0 chr2L 2011265 2011314 -21000230 + AT_rich Low_complexity Low_complexity 1 49 0 7 600 192 148 32 16 chr2L 2011793 2011855 -20999689 + A-rich Low_complexity Low_complexity 6 68 0 7 600 244 304 0 0 chr2L 2013957 2014049 -20997495 + CT-rich Low_complexity Low_complexity 2 93 0 7 600 183 100 0 0 chr2L 2015672 2015702 -20995842 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 600 201 156 0 0 chr2L 2015763 2015795 -20995749 + (ATG)n Simple_repeat Simple_repeat 2 33 0 7 600 24 0 0 0 chr2L 2017460 2017484 -20994060 + AT_rich Low_complexity Low_complexity 1 24 0 7 600 22 0 0 0 chr2L 2017617 2017639 -20993905 + AT_rich Low_complexity Low_complexity 1 22 0 7 600 270 0 0 0 chr2L 2019619 2019649 -20991895 + (CAGTG)n Simple_repeat Simple_repeat 2 31 0 7 600 201 39 0 0 chr2L 2019977 2020003 -20991541 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 600 22 0 0 0 chr2L 2020520 2020542 -20991002 + AT_rich Low_complexity Low_complexity 1 22 0 7 600 198 176 0 0 chr2L 2024899 2024950 -20986594 + (CAT)n Simple_repeat Simple_repeat 2 52 0 7 600 202 279 0 16 chr2L 2037988 2038050 -20973494 + GA-rich Low_complexity Low_complexity 6 66 0 7 600 203 179 0 0 chr2L 2038164 2038203 -20973341 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 600 33 25 0 0 chr2L 2044277 2044317 -20967227 + AT_rich Low_complexity Low_complexity 1 40 0 7 600 272 262 0 0 chr2L 2044614 2044675 -20966869 + (CAT)n Simple_repeat Simple_repeat 1 61 0 7 600 201 133 0 0 chr2L 2050874 2050904 -20960640 + (CCTG)n Simple_repeat Simple_repeat 3 32 0 7 600 180 0 0 0 chr2L 2050980 2051000 -20960544 + (TG)n Simple_repeat Simple_repeat 2 21 0 7 600 192 214 0 0 chr2L 2052166 2052222 -20959322 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 600 183 42 0 0 chr2L 2058791 2058815 -20952729 + (ATTCG)n Simple_repeat Simple_repeat 1 24 0 7 600 217 239 15 0 chr2L 2059212 2059279 -20952265 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 600 24 0 0 0 chr2L 2062661 2062685 -20948859 + AT_rich Low_complexity Low_complexity 1 24 0 7 600 216 154 0 0 chr2L 2065288 2065340 -20946204 + (CAG)n Simple_repeat Simple_repeat 1 52 0 7 600 198 0 0 0 chr2L 2066276 2066298 -20945246 + (TA)n Simple_repeat Simple_repeat 2 23 0 7 600 183 80 0 0 chr2L 2071900 2071925 -20939619 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 600 253 260 13 13 chr2L 2073366 2073444 -20938100 + (CACGC)n Simple_repeat Simple_repeat 4 81 0 7 600 209 184 0 0 chr2L 2075446 2075484 -20936060 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 600 210 71 0 0 chr2L 2086419 2086447 -20925097 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 600 207 69 0 0 chr2L 2087621 2087650 -20923894 + (TATAA)n Simple_repeat Simple_repeat 4 32 0 7 600 224 211 0 0 chr2L 2088105 2088157 -20923387 + (CTG)n Simple_repeat Simple_repeat 3 54 0 7 600 204 40 0 0 chr2L 2090629 2090654 -20920890 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 600 23 0 0 0 chr2L 2093222 2093245 -20918299 + AT_rich Low_complexity Low_complexity 1 23 0 7 600 30 0 0 0 chr2L 2093533 2093563 -20917981 + AT_rich Low_complexity Low_complexity 1 30 0 7 600 336 139 76 0 chr2L 2094501 2094580 -20916964 - ROO_I LTR Pao -7513 743 659 7 600 217 271 0 0 chr2L 2094713 2094772 -20916772 + (CTG)n Simple_repeat Simple_repeat 2 60 0 7 600 363 127 0 0 chr2L 2094879 2094942 -20916602 + (CTG)n Simple_repeat Simple_repeat 3 65 0 7 600 222 75 56 19 chr2L 2096171 2096225 -20915319 + (CAAAA)n Simple_repeat Simple_repeat 4 59 0 7 601 217 192 49 49 chr2L 2099092 2099174 -20912370 + (CAAAC)n Simple_repeat Simple_repeat 4 85 0 7 601 3964 2 0 2 chr2L 2100429 2100858 -20910686 - ROO_LTR LTR Pao 0 428 1 7 601 74656 1 3 0 chr2L 2100858 2109093 -20902451 - ROO_I LTR Pao 0 8256 1 7 601 3964 2 0 2 chr2L 2109093 2109522 -20902022 - ROO_LTR LTR Pao 0 428 1 7 601 45 45 0 0 chr2L 2110174 2110240 -20901304 + AT_rich Low_complexity Low_complexity 1 66 0 7 601 32 26 0 0 chr2L 2110263 2110302 -20901242 + AT_rich Low_complexity Low_complexity 1 39 0 7 601 36 0 0 0 chr2L 2110954 2110990 -20900554 + AT_rich Low_complexity Low_complexity 1 36 0 7 601 4874 0 0 0 chr2L 2112167 2112685 -20898859 - NOMAD_LTR LTR Gypsy 0 518 1 7 601 61590 0 1 0 chr2L 2112685 2119254 -20892290 - NOMAD_I LTR Gypsy 0 6572 1 7 601 4874 0 0 0 chr2L 2119254 2119772 -20891772 - NOMAD_LTR LTR Gypsy 0 518 1 7 601 194 91 0 29 chr2L 2119936 2119970 -20891574 + (CAG)n Simple_repeat Simple_repeat 3 35 0 7 601 228 100 0 0 chr2L 2120874 2120914 -20890630 + (ATGGTG)n Simple_repeat Simple_repeat 3 42 0 7 601 222 118 0 0 chr2L 2121353 2121387 -20890157 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 601 180 0 0 0 chr2L 2123065 2123085 -20888459 + (TA)n Simple_repeat Simple_repeat 2 21 0 7 601 186 43 0 0 chr2L 2123483 2123506 -20888038 + (TTA)n Simple_repeat Simple_repeat 2 24 0 7 601 187 31 30 30 chr2L 2124089 2124122 -20887422 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 7 601 252 237 0 0 chr2L 2127495 2127554 -20883990 + (CA)n Simple_repeat Simple_repeat 1 59 0 7 601 23 0 0 0 chr2L 2137010 2137033 -20874511 + AT_rich Low_complexity Low_complexity 1 23 0 7 601 180 0 0 0 chr2L 2137070 2137090 -20874454 + (CGAAT)n Simple_repeat Simple_repeat 2 21 0 7 601 21 36 0 0 chr2L 2137256 2137284 -20874260 + AT_rich Low_complexity Low_complexity 1 28 0 7 601 206 77 51 0 chr2L 2145291 2145330 -20866214 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 601 21 0 0 0 chr2L 2156962 2156983 -20854561 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 310 202 0 87 chr2L 2159453 2159556 -20851988 - ROO_I LTR Pao -7523 733 640 7 601 21 0 0 0 chr2L 2166150 2166171 -20845373 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 219 146 0 0 chr2L 2169151 2169192 -20842352 + (AACTG)n Simple_repeat Simple_repeat 1 41 0 7 601 195 42 0 0 chr2L 2170183 2170207 -20841337 + (TATG)n Simple_repeat Simple_repeat 1 24 0 7 601 273 135 0 0 chr2L 2170731 2170783 -20840761 + (CATCC)n Simple_repeat Simple_repeat 4 55 0 7 601 23 33 0 0 chr2L 2171241 2171271 -20840273 + AT_rich Low_complexity Low_complexity 1 30 0 7 601 24 0 0 0 chr2L 2171646 2171670 -20839874 + AT_rich Low_complexity Low_complexity 1 24 0 7 601 225 152 0 42 chr2L 2173653 2173701 -20837843 + CT-rich Low_complexity Low_complexity 3 48 0 7 601 22 35 0 0 chr2L 2174121 2174150 -20837394 + AT_rich Low_complexity Low_complexity 1 29 0 7 601 271 0 25 25 chr2L 2175695 2175735 -20835809 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 601 23 0 0 0 chr2L 2176128 2176151 -20835393 + AT_rich Low_complexity Low_complexity 1 23 0 8 601 204 97 0 0 chr2L 2178014 2178045 -20833499 + (TTTTTG)n Simple_repeat Simple_repeat 5 35 0 8 601 189 175 0 0 chr2L 2178485 2178525 -20833019 + (TTG)n Simple_repeat Simple_repeat 2 41 0 8 601 22 0 0 0 chr2L 2179349 2179371 -20832173 + AT_rich Low_complexity Low_complexity 1 22 0 8 601 195 42 0 0 chr2L 2179961 2179985 -20831559 + (CGGT)n Simple_repeat Simple_repeat 1 24 0 8 601 207 191 0 0 chr2L 2185683 2185725 -20825819 + CT-rich Low_complexity Low_complexity 3 44 0 8 601 238 290 0 11 chr2L 2190895 2190989 -20820555 + (TTG)n Simple_repeat Simple_repeat 3 95 0 8 601 22 0 0 0 chr2L 2193117 2193139 -20818405 + AT_rich Low_complexity Low_complexity 1 22 0 8 601 23 54 0 0 chr2L 2197472 2197509 -20814035 + AT_rich Low_complexity Low_complexity 1 37 0 8 601 283 198 11 34 chr2L 2197807 2197896 -20813648 + (TTG)n Simple_repeat Simple_repeat 2 88 0 8 601 27 0 0 0 chr2L 2199638 2199665 -20811879 + AT_rich Low_complexity Low_complexity 1 27 0 8 601 25 83 0 0 chr2L 2209759 2209819 -20801725 + AT_rich Low_complexity Low_complexity 1 60 0 8 601 257 241 13 0 chr2L 2226827 2226906 -20784638 + (CA)n Simple_repeat Simple_repeat 2 81 0 8 602 21 0 0 0 chr2L 2228707 2228728 -20782816 + AT_rich Low_complexity Low_complexity 1 21 0 8 602 26 0 0 0 chr2L 2229149 2229175 -20782369 + AT_rich Low_complexity Low_complexity 1 26 0 8 602 217 163 20 0 chr2L 2230160 2230209 -20781335 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 602 21 36 0 0 chr2L 2231064 2231092 -20780452 + AT_rich Low_complexity Low_complexity 1 28 0 8 602 24 0 0 0 chr2L 2235914 2235938 -20775606 + AT_rich Low_complexity Low_complexity 1 24 0 8 602 189 232 0 0 chr2L 2236380 2236449 -20775095 + (CTG)n Simple_repeat Simple_repeat 3 71 0 8 602 231 61 0 0 chr2L 2242213 2242246 -20769298 + (GA)n Simple_repeat Simple_repeat 1 33 0 8 602 22 0 0 0 chr2L 2243196 2243218 -20768326 + AT_rich Low_complexity Low_complexity 1 22 0 8 602 26 64 0 0 chr2L 2247553 2247600 -20763944 + AT_rich Low_complexity Low_complexity 1 47 0 8 602 204 40 0 0 chr2L 2248159 2248184 -20763360 + (CAGTT)n Simple_repeat Simple_repeat 5 29 0 8 602 25 0 0 0 chr2L 2252690 2252715 -20758829 + AT_rich Low_complexity Low_complexity 1 25 0 8 602 188 0 74 0 chr2L 2253859 2253886 -20757658 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 8 602 242 200 0 0 chr2L 2262169 2262224 -20749320 + (CCCA)n Simple_repeat Simple_repeat 2 56 0 8 602 22 0 0 0 chr2L 2265451 2265473 -20746071 + AT_rich Low_complexity Low_complexity 1 22 0 8 602 229 223 74 46 chr2L 2267349 2267457 -20744087 + ROO_I LTR Pao 643 753 -7503 8 602 225 109 36 18 chr2L 2271103 2271159 -20740385 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 8 602 22 70 0 0 chr2L 2271244 2271287 -20740257 + AT_rich Low_complexity Low_complexity 1 43 0 8 602 192 125 0 0 chr2L 2273057 2273089 -20738455 + (TA)n Simple_repeat Simple_repeat 2 33 0 8 602 216 0 0 0 chr2L 2273836 2273860 -20737684 + (CA)n Simple_repeat Simple_repeat 1 24 0 8 602 227 200 0 0 chr2L 2275177 2275222 -20736322 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 602 22 35 0 0 chr2L 2275318 2275347 -20736197 + AT_rich Low_complexity Low_complexity 1 29 0 8 602 180 97 0 0 chr2L 2275757 2275788 -20735756 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 602 215 122 20 0 chr2L 2275937 2275986 -20735558 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 602 26 0 0 0 chr2L 2276495 2276521 -20735023 + AT_rich Low_complexity Low_complexity 1 26 0 8 602 231 125 0 0 chr2L 2280568 2280608 -20730936 + (ATGGTG)n Simple_repeat Simple_repeat 5 44 0 8 602 186 103 0 0 chr2L 2282137 2282166 -20729378 + (CACTT)n Simple_repeat Simple_repeat 2 30 0 8 602 21 0 0 0 chr2L 2285020 2285041 -20726503 + AT_rich Low_complexity Low_complexity 1 21 0 8 602 27 0 0 0 chr2L 2285890 2285917 -20725627 + AT_rich Low_complexity Low_complexity 1 27 0 8 602 23 68 0 0 chr2L 2286043 2286087 -20725457 + AT_rich Low_complexity Low_complexity 1 44 0 8 602 225 65 0 0 chr2L 2293336 2293367 -20718177 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 8 602 22 0 0 0 chr2L 2293575 2293597 -20717947 + AT_rich Low_complexity Low_complexity 1 22 0 8 602 2442 0 0 0 chr2L 2294096 2294372 -20717172 - Copia_LTR LTR Copia 0 276 1 8 602 41712 1 0 0 chr2L 2294372 2298967 -20712577 - Copia_I LTR Copia 0 4593 1 8 602 2442 0 0 0 chr2L 2298967 2299243 -20712301 - Copia_LTR LTR Copia 0 276 1 8 602 25 0 0 0 chr2L 2299625 2299650 -20711894 + AT_rich Low_complexity Low_complexity 1 25 0 8 602 28 48 0 0 chr2L 2299802 2299844 -20711700 + AT_rich Low_complexity Low_complexity 1 42 0 8 602 239 273 0 0 chr2L 2307269 2307324 -20704220 + (CTGGGG)n Simple_repeat Simple_repeat 4 58 0 8 602 21 82 0 0 chr2L 2307706 2307755 -20703789 + AT_rich Low_complexity Low_complexity 1 49 0 8 602 252 0 0 0 chr2L 2320014 2320042 -20691502 + (TG)n Simple_repeat Simple_repeat 2 29 0 8 602 245 217 0 0 chr2L 2326726 2326772 -20684772 + A-rich Low_complexity Low_complexity 3 48 0 8 602 208 174 22 0 chr2L 2328884 2328930 -20682614 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 602 195 42 0 0 chr2L 2330063 2330087 -20681457 + (A)n Simple_repeat Simple_repeat 1 24 0 8 602 28 29 0 0 chr2L 2330838 2330873 -20680671 + AT_rich Low_complexity Low_complexity 1 35 0 8 602 22 0 0 0 chr2L 2336023 2336045 -20675499 + AT_rich Low_complexity Low_complexity 1 22 0 8 602 21 36 0 0 chr2L 2337534 2337562 -20673982 + AT_rich Low_complexity Low_complexity 1 28 0 8 602 30 0 0 0 chr2L 2338671 2338701 -20672843 + AT_rich Low_complexity Low_complexity 1 30 0 8 602 251 288 0 0 chr2L 2339556 2339636 -20671908 + (CCCGAA)n Simple_repeat Simple_repeat 5 84 0 8 602 201 133 0 0 chr2L 2340404 2340434 -20671110 + (CACCAT)n Simple_repeat Simple_repeat 1 30 0 8 602 22 35 0 0 chr2L 2343511 2343540 -20668004 + AT_rich Low_complexity Low_complexity 1 29 0 8 602 201 39 0 0 chr2L 2345103 2345129 -20666415 + (T)n Simple_repeat Simple_repeat 1 26 0 8 602 23 0 0 0 chr2L 2350233 2350256 -20661288 + AT_rich Low_complexity Low_complexity 1 23 0 8 602 28 48 0 0 chr2L 2350278 2350320 -20661224 + AT_rich Low_complexity Low_complexity 1 42 0 8 602 180 200 0 0 chr2L 2359140 2359185 -20652359 + (TA)n Simple_repeat Simple_repeat 1 45 0 8 602 34 0 0 0 chr2L 2359195 2359229 -20652315 + AT_rich Low_complexity Low_complexity 1 34 0 8 603 21 0 0 0 chr2L 2359337 2359358 -20652186 + AT_rich Low_complexity Low_complexity 1 21 0 8 603 21 0 0 0 chr2L 2359597 2359618 -20651926 + AT_rich Low_complexity Low_complexity 1 21 0 8 603 32 0 0 0 chr2L 2360320 2360352 -20651192 + AT_rich Low_complexity Low_complexity 1 32 0 8 603 21 36 0 0 chr2L 2360904 2360932 -20650612 + AT_rich Low_complexity Low_complexity 1 28 0 8 603 25 31 0 0 chr2L 2361952 2361984 -20649560 + AT_rich Low_complexity Low_complexity 1 32 0 8 603 25 0 0 0 chr2L 2365025 2365050 -20646494 + AT_rich Low_complexity Low_complexity 1 25 0 8 603 200 214 0 0 chr2L 2365556 2365598 -20645946 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 603 207 0 0 0 chr2L 2369048 2369071 -20642473 + (T)n Simple_repeat Simple_repeat 1 23 0 8 603 21 57 0 0 chr2L 2372047 2372082 -20639462 + AT_rich Low_complexity Low_complexity 1 35 0 8 603 25 31 0 0 chr2L 2372422 2372454 -20639090 + AT_rich Low_complexity Low_complexity 1 32 0 8 603 186 43 0 0 chr2L 2376599 2376622 -20634922 + (TATG)n Simple_repeat Simple_repeat 2 24 0 8 603 45 19 0 0 chr2L 2376738 2376790 -20634754 + AT_rich Low_complexity Low_complexity 1 52 0 8 603 265 164 0 102 chr2L 2378805 2378893 -20632651 + ROO_I LTR Pao 646 724 -7532 8 603 227 309 0 0 chr2L 2380011 2380095 -20631449 + (CAA)n Simple_repeat Simple_repeat 1 84 0 8 603 27 62 0 0 chr2L 2380273 2380321 -20631223 + AT_rich Low_complexity Low_complexity 1 48 0 8 603 727 255 21 14 chr2L 2389501 2389796 -20621748 - SAR_DM Satellite Satellite -611 861 623 8 603 23 54 0 0 chr2L 2394926 2394963 -20616581 + AT_rich Low_complexity Low_complexity 1 37 0 8 603 23 0 0 0 chr2L 2398633 2398656 -20612888 + AT_rich Low_complexity Low_complexity 1 23 0 8 603 26 0 0 0 chr2L 2403651 2403677 -20607867 + AT_rich Low_complexity Low_complexity 1 26 0 8 603 23 0 0 0 chr2L 2409317 2409340 -20602204 + AT_rich Low_complexity Low_complexity 1 23 0 8 603 25 31 0 0 chr2L 2411235 2411267 -20600277 + AT_rich Low_complexity Low_complexity 1 32 0 8 603 25 0 0 0 chr2L 2418293 2418318 -20593226 + AT_rich Low_complexity Low_complexity 1 25 0 8 603 24 32 0 0 chr2L 2418425 2418456 -20593088 + AT_rich Low_complexity Low_complexity 1 31 0 8 603 26 82 0 0 chr2L 2420611 2420672 -20590872 + AT_rich Low_complexity Low_complexity 1 61 0 8 603 324 155 0 0 chr2L 2423814 2423885 -20587659 + (CAT)n Simple_repeat Simple_repeat 3 73 0 8 603 246 105 0 0 chr2L 2426001 2426039 -20585505 + (CTG)n Simple_repeat Simple_repeat 1 38 0 8 603 23 0 0 0 chr2L 2427467 2427490 -20584054 + AT_rich Low_complexity Low_complexity 1 23 0 8 603 204 40 0 0 chr2L 2428057 2428082 -20583462 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 603 246 158 48 19 chr2L 2428206 2428309 -20583235 + (CTG)n Simple_repeat Simple_repeat 2 107 0 8 603 185 0 0 39 chr2L 2428855 2428881 -20582663 + (CGAAT)n Simple_repeat Simple_repeat 5 29 0 8 603 217 179 18 18 chr2L 2429777 2429834 -20581710 + (GCTTG)n Simple_repeat Simple_repeat 1 57 0 8 603 183 100 0 0 chr2L 2430115 2430145 -20581399 + (CAG)n Simple_repeat Simple_repeat 2 31 0 8 603 29 0 0 0 chr2L 2433122 2433151 -20578393 + AT_rich Low_complexity Low_complexity 1 29 0 9 603 244 218 0 22 chr2L 2433761 2433850 -20577694 + (CAA)n Simple_repeat Simple_repeat 2 88 0 9 603 25 0 0 0 chr2L 2440368 2440393 -20571151 + AT_rich Low_complexity Low_complexity 1 25 0 9 603 25 0 0 0 chr2L 2443430 2443455 -20568089 + AT_rich Low_complexity Low_complexity 1 25 0 9 603 23 0 0 0 chr2L 2445424 2445447 -20566097 + AT_rich Low_complexity Low_complexity 1 23 0 9 603 291 246 0 0 chr2L 2452215 2452272 -20559272 + (CACCAT)n Simple_repeat Simple_repeat 3 59 0 9 603 195 42 0 0 chr2L 2454576 2454600 -20556944 + (GTCTG)n Simple_repeat Simple_repeat 1 24 0 9 603 247 242 16 0 chr2L 2454647 2454709 -20556835 + (CCG)n Simple_repeat Simple_repeat 3 65 0 9 603 24 32 0 0 chr2L 2459707 2459738 -20551806 + AT_rich Low_complexity Low_complexity 1 31 0 9 603 30 45 0 0 chr2L 2459797 2459841 -20551703 + AT_rich Low_complexity Low_complexity 1 44 0 9 603 180 0 0 0 chr2L 2464516 2464536 -20547008 + (GAA)n Simple_repeat Simple_repeat 2 21 0 9 603 201 74 0 0 chr2L 2467505 2467532 -20544012 + (CACTC)n Simple_repeat Simple_repeat 5 31 0 9 603 49 0 0 0 chr2L 2467830 2467879 -20543665 + AT_rich Low_complexity Low_complexity 1 49 0 9 603 21 82 0 0 chr2L 2468733 2468782 -20542762 + AT_rich Low_complexity Low_complexity 1 49 0 9 603 211 191 0 0 chr2L 2470482 2470524 -20541020 + (TTCGG)n Simple_repeat Simple_repeat 1 42 0 9 603 21 0 0 0 chr2L 2473043 2473064 -20538480 + AT_rich Low_complexity Low_complexity 1 21 0 9 603 27 0 0 0 chr2L 2473724 2473751 -20537793 + AT_rich Low_complexity Low_complexity 1 27 0 9 603 180 0 0 0 chr2L 2476572 2476592 -20534952 + (TTA)n Simple_repeat Simple_repeat 3 22 0 9 603 219 225 0 0 chr2L 2478721 2478761 -20532783 + (TCG)n Simple_repeat Simple_repeat 1 40 0 9 603 751 280 12 12 chr2L 2479643 2479896 -20531648 - SAR_DM Satellite Satellite -615 857 605 9 603 26 30 0 0 chr2L 2480068 2480101 -20531443 + AT_rich Low_complexity Low_complexity 1 33 0 9 603 183 42 0 0 chr2L 2484022 2484046 -20527498 + (GGA)n Simple_repeat Simple_repeat 3 26 0 9 603 198 128 0 0 chr2L 2484766 2484805 -20526739 + (CTG)n Simple_repeat Simple_repeat 3 41 0 9 603 22 0 0 0 chr2L 2488116 2488138 -20523406 + AT_rich Low_complexity Low_complexity 1 22 0 9 603 23 0 0 0 chr2L 2488975 2488998 -20522546 + AT_rich Low_complexity Low_complexity 1 23 0 9 604 326 195 0 12 chr2L 2497054 2497137 -20514407 + (CAT)n Simple_repeat Simple_repeat 1 82 0 9 604 22 0 0 0 chr2L 2499883 2499905 -20511639 + AT_rich Low_complexity Low_complexity 1 22 0 9 604 30 27 0 0 chr2L 2506323 2506360 -20505184 + AT_rich Low_complexity Low_complexity 1 37 0 9 604 24 32 0 0 chr2L 2506725 2506756 -20504788 + AT_rich Low_complexity Low_complexity 1 31 0 9 604 23 0 0 0 chr2L 2508053 2508076 -20503468 + AT_rich Low_complexity Low_complexity 1 23 0 9 604 192 97 0 0 chr2L 2510458 2510489 -20501055 + (CA)n Simple_repeat Simple_repeat 1 31 0 9 604 30 27 0 0 chr2L 2514699 2514736 -20496808 + AT_rich Low_complexity Low_complexity 1 37 0 9 604 207 146 0 0 chr2L 2524389 2524430 -20487114 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 604 24 32 0 0 chr2L 2524687 2524718 -20486826 + AT_rich Low_complexity Low_complexity 1 31 0 9 604 240 167 0 0 chr2L 2526733 2526781 -20484763 + (ATG)n Simple_repeat Simple_repeat 2 49 0 9 604 198 71 0 0 chr2L 2526938 2526966 -20484578 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 604 198 0 0 0 chr2L 2527624 2527646 -20483898 + (CA)n Simple_repeat Simple_repeat 1 22 0 9 604 267 140 0 0 chr2L 2530143 2530193 -20481351 + (CAG)n Simple_repeat Simple_repeat 1 50 0 9 604 246 190 58 23 chr2L 2530303 2530389 -20481155 + ROO_I LTR Pao 644 732 -7524 9 604 180 0 0 0 chr2L 2530457 2530477 -20481067 + (TG)n Simple_repeat Simple_repeat 2 21 0 9 604 198 0 0 0 chr2L 2531109 2531131 -20480413 + (CA)n Simple_repeat Simple_repeat 2 23 0 9 604 22 0 0 0 chr2L 2532839 2532861 -20478683 + AT_rich Low_complexity Low_complexity 1 22 0 9 604 235 143 17 67 chr2L 2533953 2534013 -20477531 + (GAGTG)n Simple_repeat Simple_repeat 2 58 0 9 604 27 0 0 0 chr2L 2537637 2537664 -20473880 + AT_rich Low_complexity Low_complexity 1 27 0 9 604 22 80 0 0 chr2L 2538430 2538480 -20473064 + AT_rich Low_complexity Low_complexity 1 50 0 9 604 26 30 0 0 chr2L 2541101 2541134 -20470410 + AT_rich Low_complexity Low_complexity 1 33 0 9 604 271 263 0 0 chr2L 2542441 2542517 -20469027 + (TG)n Simple_repeat Simple_repeat 1 76 0 9 604 207 0 0 0 chr2L 2542827 2542850 -20468694 + (CA)n Simple_repeat Simple_repeat 2 24 0 9 604 216 224 15 15 chr2L 2544974 2545042 -20466502 + (CA)n Simple_repeat Simple_repeat 2 69 0 9 604 215 262 0 32 chr2L 2547262 2547325 -20464219 + CT-rich Low_complexity Low_complexity 4 64 0 9 604 26 50 0 0 chr2L 2552339 2552379 -20459165 + AT_rich Low_complexity Low_complexity 1 40 0 9 604 23 33 0 0 chr2L 2555695 2555725 -20455819 + AT_rich Low_complexity Low_complexity 1 30 0 9 604 21 0 0 0 chr2L 2556317 2556338 -20455206 + AT_rich Low_complexity Low_complexity 1 21 0 9 604 183 129 0 0 chr2L 2557647 2557678 -20453866 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 604 204 231 19 0 chr2L 2562710 2562762 -20448782 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 604 200 18 123 0 chr2L 2563402 2563459 -20448085 + (TA)n Simple_repeat Simple_repeat 2 65 0 9 604 23 0 0 0 chr2L 2565272 2565295 -20446249 + AT_rich Low_complexity Low_complexity 1 23 0 9 604 3605 5 7 7 chr2L 2565592 2566006 -20445538 + DM297_LTR LTR Gypsy 1 414 0 9 604 26747 7 0 0 chr2L 2566006 2569028 -20442516 + DM297_I LTR Gypsy 1 3021 -3146 9 604 18928 9 0 0 chr2L 2569010 2571189 -20440355 + DM297_I LTR Gypsy 3989 6167 0 9 604 3605 5 7 7 chr2L 2571189 2571603 -20439941 + DM297_LTR LTR Gypsy 1 414 0 9 604 26 0 0 0 chr2L 2576912 2576938 -20434606 + AT_rich Low_complexity Low_complexity 1 26 0 9 604 246 62 0 0 chr2L 2587251 2587283 -20424261 + (ATG)n Simple_repeat Simple_repeat 1 32 0 9 604 25 0 0 0 chr2L 2590106 2590131 -20421413 + AT_rich Low_complexity Low_complexity 1 25 0 9 604 22 0 0 0 chr2L 2590699 2590721 -20420823 + AT_rich Low_complexity Low_complexity 1 22 0 9 604 28 0 0 0 chr2L 2597040 2597068 -20414476 + AT_rich Low_complexity Low_complexity 1 28 0 9 604 192 77 0 0 chr2L 2602658 2602684 -20408860 + (TA)n Simple_repeat Simple_repeat 1 26 0 9 604 209 132 26 0 chr2L 2606230 2606268 -20405276 + (TA)n Simple_repeat Simple_repeat 2 40 0 9 604 215 233 17 0 chr2L 2611549 2611609 -20399935 + (TG)n Simple_repeat Simple_repeat 2 62 0 9 604 235 276 0 33 chr2L 2616260 2616350 -20395194 + (TTG)n Simple_repeat Simple_repeat 1 87 0 9 604 26 0 0 0 chr2L 2619266 2619292 -20392252 + AT_rich Low_complexity Low_complexity 1 26 0 9 604 183 186 0 0 chr2L 2619516 2619559 -20391985 + A-rich Low_complexity Low_complexity 1 43 0 9 604 260 27 0 26 chr2L 2619671 2619709 -20391835 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 604 249 119 0 0 chr2L 2620293 2620335 -20391209 + (TTTAG)n Simple_repeat Simple_repeat 3 44 0 9 605 22 35 0 0 chr2L 2623890 2623919 -20387625 + AT_rich Low_complexity Low_complexity 1 29 0 9 605 210 240 0 0 chr2L 2633326 2633376 -20378168 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 605 22 0 0 0 chr2L 2640498 2640520 -20371024 + AT_rich Low_complexity Low_complexity 1 22 0 9 605 180 111 0 0 chr2L 2640577 2640604 -20370940 + (T)n Simple_repeat Simple_repeat 1 27 0 9 605 221 246 18 0 chr2L 2642284 2642341 -20369203 + (CTAGGG)n Simple_repeat Simple_repeat 5 62 0 9 605 44 46 0 0 chr2L 2648355 2648420 -20363124 + AT_rich Low_complexity Low_complexity 1 65 0 9 605 192 40 0 0 chr2L 2658165 2658190 -20353354 + (GCTG)n Simple_repeat Simple_repeat 4 28 0 9 605 15461 1 0 0 chr2L 2661257 2663012 -20348532 + I_DM LINE I 3703 5457 -774 9 605 189 0 0 0 chr2L 2663012 2663033 -20348511 + (TAA)n Simple_repeat Simple_repeat 3 23 0 9 605 27 0 0 0 chr2L 2664897 2664924 -20346620 + AT_rich Low_complexity Low_complexity 1 27 0 9 605 28 0 0 0 chr2L 2677383 2677411 -20334133 + AT_rich Low_complexity Low_complexity 1 28 0 9 605 320 155 14 0 chr2L 2680383 2680454 -20331090 + (TA)n Simple_repeat Simple_repeat 2 73 0 9 605 25 0 0 0 chr2L 2680637 2680662 -20330882 + AT_rich Low_complexity Low_complexity 1 25 0 9 605 23 0 0 0 chr2L 2681354 2681377 -20330167 + AT_rich Low_complexity Low_complexity 1 23 0 9 605 221 0 35 0 chr2L 2683010 2683039 -20328505 + (CATA)n Simple_repeat Simple_repeat 2 31 0 9 605 26 0 0 0 chr2L 2683825 2683851 -20327693 + AT_rich Low_complexity Low_complexity 1 26 0 9 605 26 0 0 0 chr2L 2684626 2684652 -20326892 + AT_rich Low_complexity Low_complexity 1 26 0 9 605 191 36 36 0 chr2L 2684711 2684739 -20326805 + (GAGTG)n Simple_repeat Simple_repeat 5 33 0 9 605 237 33 0 0 chr2L 2686269 2686299 -20325245 + (CTTTG)n Simple_repeat Simple_repeat 4 33 0 9 605 186 103 0 0 chr2L 2687514 2687543 -20324001 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 605 243 61 0 0 chr2L 2689150 2689183 -20322361 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 605 21 36 0 0 chr2L 2689353 2689381 -20322163 + AT_rich Low_complexity Low_complexity 1 28 0 9 605 21 71 0 0 chr2L 2689927 2689969 -20321575 + AT_rich Low_complexity Low_complexity 1 42 0 9 605 192 40 0 0 chr2L 2691179 2691204 -20320340 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 605 207 241 52 0 chr2L 2698021 2698079 -20313465 + (TTCGGG)n Simple_repeat Simple_repeat 1 61 0 9 605 365 39 20 0 chr2L 2698097 2698148 -20313396 + (CTG)n Simple_repeat Simple_repeat 1 52 0 9 605 189 74 0 0 chr2L 2701096 2701123 -20310421 + (GA)n Simple_repeat Simple_repeat 2 28 0 9 605 278 242 0 0 chr2L 2703645 2703711 -20307833 + (CCCA)n Simple_repeat Simple_repeat 4 69 0 1 605 201 74 0 0 chr2L 2704258 2704285 -20307259 + (CACTC)n Simple_repeat Simple_repeat 1 27 0 1 605 213 94 0 0 chr2L 2704855 2704887 -20306657 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 605 27 0 0 0 chr2L 2707213 2707240 -20304304 + AT_rich Low_complexity Low_complexity 1 27 0 1 605 40 21 0 0 chr2L 2708023 2708070 -20303474 + AT_rich Low_complexity Low_complexity 1 47 0 1 605 232 97 0 0 chr2L 2713413 2713444 -20298100 - TRANSIB2 DNA Transib -275 2569 2539 1 605 23 0 0 0 chr2L 2717207 2717230 -20294314 + AT_rich Low_complexity Low_complexity 1 23 0 1 605 21 0 0 0 chr2L 2718097 2718118 -20293426 + AT_rich Low_complexity Low_complexity 1 21 0 1 605 21 36 0 0 chr2L 2719393 2719421 -20292123 + AT_rich Low_complexity Low_complexity 1 28 0 1 605 24 0 0 0 chr2L 2719903 2719927 -20291617 + AT_rich Low_complexity Low_complexity 1 24 0 1 605 225 0 0 0 chr2L 2720140 2720165 -20291379 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 605 336 83 0 0 chr2L 2723625 2723673 -20287871 + (ATG)n Simple_repeat Simple_repeat 1 48 0 1 605 186 71 0 0 chr2L 2727006 2727034 -20284510 + (A)n Simple_repeat Simple_repeat 1 28 0 1 605 21 36 0 0 chr2L 2730188 2730216 -20281328 + AT_rich Low_complexity Low_complexity 1 28 0 1 605 318 67 0 0 chr2L 2731286 2731331 -20280213 + (ATGGTG)n Simple_repeat Simple_repeat 1 45 0 1 605 261 83 0 0 chr2L 2733748 2733784 -20277760 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1 605 35 0 0 0 chr2L 2735400 2735435 -20276109 + AT_rich Low_complexity Low_complexity 1 35 0 1 605 189 0 0 0 chr2L 2736438 2736459 -20275085 + (A)n Simple_repeat Simple_repeat 1 21 0 1 605 181 100 0 107 chr2L 2745903 2745959 -20265585 + GA-rich Low_complexity Low_complexity 2 51 0 1 605 35 54 0 0 chr2L 2748793 2748849 -20262695 + AT_rich Low_complexity Low_complexity 1 56 0 1 605 48 43 0 0 chr2L 2748978 2749047 -20262497 + AT_rich Low_complexity Low_complexity 1 69 0 1 605 68 0 0 0 chr2L 2749116 2749184 -20262360 + AT_rich Low_complexity Low_complexity 1 68 0 1 605 213 39 0 0 chr2L 2752365 2752391 -20259153 + (TTCTG)n Simple_repeat Simple_repeat 3 28 0 1 606 213 315 0 0 chr2L 2753531 2753623 -20257921 + (CCG)n Simple_repeat Simple_repeat 3 94 0 1 606 186 43 0 0 chr2L 2756243 2756266 -20255278 + (ATG)n Simple_repeat Simple_repeat 3 25 0 1 606 290 254 40 0 chr2L 2756306 2756432 -20255112 + A-rich Low_complexity Low_complexity 1 131 0 1 606 23 54 0 0 chr2L 2756475 2756512 -20255032 + AT_rich Low_complexity Low_complexity 1 37 0 1 606 203 179 0 0 chr2L 2757140 2757179 -20254365 + A-rich Low_complexity Low_complexity 1 39 0 1 606 25 0 0 0 chr2L 2759806 2759831 -20251713 + AT_rich Low_complexity Low_complexity 1 25 0 1 606 22 56 0 0 chr2L 2765769 2765805 -20245739 + AT_rich Low_complexity Low_complexity 1 36 0 1 606 21 0 0 0 chr2L 2770036 2770057 -20241487 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 21 0 0 0 chr2L 2770892 2770913 -20240631 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 201 39 0 0 chr2L 2772549 2772575 -20238969 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 606 3605 5 7 7 chr2L 2772652 2773066 -20238478 + DM297_LTR LTR Gypsy 1 414 0 1 606 34660 6 0 1 chr2L 2773066 2776969 -20234575 + DM297_I LTR Gypsy 1 3900 -2267 1 606 3034 22 0 0 chr2L 2776962 2777324 -20234220 + DM297_I LTR Gypsy 4198 4559 -1608 1 606 12577 7 0 0 chr2L 2777321 2778761 -20232783 + DM297_I LTR Gypsy 4728 6167 0 1 606 3605 5 7 7 chr2L 2778761 2779175 -20232369 + DM297_LTR LTR Gypsy 1 414 0 1 606 22 0 0 0 chr2L 2779344 2779366 -20232178 + AT_rich Low_complexity Low_complexity 1 22 0 1 606 210 250 0 0 chr2L 2779458 2779506 -20232038 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 1 606 201 39 0 0 chr2L 2779692 2779718 -20231826 + (TCTCC)n Simple_repeat Simple_repeat 4 29 0 1 606 195 167 0 0 chr2L 2779776 2779818 -20231726 + (TATG)n Simple_repeat Simple_repeat 3 44 0 1 606 23 0 0 0 chr2L 2780353 2780376 -20231168 + AT_rich Low_complexity Low_complexity 1 23 0 1 606 204 67 0 0 chr2L 2780806 2780836 -20230708 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 606 29 0 0 0 chr2L 2782015 2782044 -20229500 + AT_rich Low_complexity Low_complexity 1 29 0 1 606 210 122 0 47 chr2L 2785253 2785296 -20226248 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 606 361 133 20 30 chr2L 2785405 2785506 -20226038 + (TAG)n Simple_repeat Simple_repeat 2 101 0 1 606 207 69 0 0 chr2L 2788358 2788387 -20223157 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 606 190 73 0 47 chr2L 2788676 2788719 -20222825 + (CGAG)n Simple_repeat Simple_repeat 2 42 0 1 606 243 79 0 0 chr2L 2789472 2789510 -20222034 + (T)n Simple_repeat Simple_repeat 1 38 0 1 606 241 244 26 0 chr2L 2790196 2790274 -20221270 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 606 25 51 0 0 chr2L 2793594 2793633 -20217911 + AT_rich Low_complexity Low_complexity 1 39 0 1 606 210 71 0 0 chr2L 2794217 2794245 -20217299 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 1 606 209 119 0 23 chr2L 2797576 2797619 -20213925 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 606 24 77 0 0 chr2L 2798845 2798897 -20212647 + AT_rich Low_complexity Low_complexity 1 52 0 1 606 267 122 0 0 chr2L 2798935 2798984 -20212560 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 606 198 118 0 0 chr2L 2799128 2799162 -20212382 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 606 28 0 0 0 chr2L 2799330 2799358 -20212186 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 230 180 16 0 chr2L 2799661 2799722 -20211822 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 606 22 35 0 0 chr2L 2800744 2800773 -20210771 + AT_rich Low_complexity Low_complexity 1 29 0 1 606 195 129 0 0 chr2L 2802397 2802428 -20209116 + (TCG)n Simple_repeat Simple_repeat 2 32 0 1 606 360 103 0 0 chr2L 2802729 2802787 -20208757 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 1 606 24 0 0 0 chr2L 2803297 2803321 -20208223 + AT_rich Low_complexity Low_complexity 1 24 0 1 606 210 222 0 0 chr2L 2806264 2806309 -20205235 + (CCCCAG)n Simple_repeat Simple_repeat 5 49 0 1 606 210 224 0 0 chr2L 2806813 2806862 -20204682 + (CATCC)n Simple_repeat Simple_repeat 2 50 0 1 606 243 88 0 0 chr2L 2807802 2807836 -20203708 + (ATTCG)n Simple_repeat Simple_repeat 5 38 0 1 606 246 81 0 0 chr2L 2808186 2808223 -20203321 + (TTCGG)n Simple_repeat Simple_repeat 1 37 0 1 606 180 77 0 0 chr2L 2823062 2823088 -20188456 + (A)n Simple_repeat Simple_repeat 1 26 0 1 606 270 81 0 0 chr2L 2828654 2828691 -20182853 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 606 186 43 0 0 chr2L 2829539 2829562 -20181982 + (TGGA)n Simple_repeat Simple_repeat 1 23 0 1 606 219 36 0 0 chr2L 2829800 2829828 -20181716 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 606 189 74 0 0 chr2L 2830131 2830158 -20181386 + (CACAC)n Simple_repeat Simple_repeat 4 30 0 1 606 23 54 0 0 chr2L 2830569 2830606 -20180938 + AT_rich Low_complexity Low_complexity 1 37 0 1 606 23 0 0 0 chr2L 2832748 2832771 -20178773 + AT_rich Low_complexity Low_complexity 1 23 0 1 606 180 0 0 0 chr2L 2832946 2832966 -20178578 + (TAA)n Simple_repeat Simple_repeat 1 20 0 1 606 22 0 0 0 chr2L 2834316 2834338 -20177206 + AT_rich Low_complexity Low_complexity 1 22 0 1 606 26 50 0 0 chr2L 2838016 2838056 -20173488 + AT_rich Low_complexity Low_complexity 1 40 0 1 606 203 54 0 75 chr2L 2838903 2838943 -20172601 + (CAG)n Simple_repeat Simple_repeat 3 39 0 1 606 26 50 0 0 chr2L 2839808 2839848 -20171696 + AT_rich Low_complexity Low_complexity 1 40 0 1 606 30 45 0 0 chr2L 2841509 2841553 -20169991 + AT_rich Low_complexity Low_complexity 1 44 0 1 606 26 50 0 0 chr2L 2842606 2842646 -20168898 + AT_rich Low_complexity Low_complexity 1 40 0 1 606 37 23 0 0 chr2L 2845905 2845949 -20165595 + AT_rich Low_complexity Low_complexity 1 44 0 1 606 21 0 0 0 chr2L 2847587 2847608 -20163936 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 222 37 0 0 chr2L 2849240 2849267 -20162277 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 606 718 271 23 10 chr2L 2850773 2851079 -20160465 + SAR_DM Satellite Satellite 584 893 -579 1 606 255 133 0 0 chr2L 2851524 2851569 -20159975 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 606 28 29 0 0 chr2L 2855886 2855921 -20155623 + AT_rich Low_complexity Low_complexity 1 35 0 1 606 21 57 0 0 chr2L 2857908 2857943 -20153601 + AT_rich Low_complexity Low_complexity 1 35 0 1 606 183 42 0 0 chr2L 2861528 2861552 -20149992 + (A)n Simple_repeat Simple_repeat 1 24 0 1 606 30 0 0 0 chr2L 2862100 2862130 -20149414 + AT_rich Low_complexity Low_complexity 1 30 0 1 606 207 195 24 0 chr2L 2868361 2868402 -20143142 + (CATA)n Simple_repeat Simple_repeat 1 42 0 1 606 22 0 0 0 chr2L 2869267 2869289 -20142255 + AT_rich Low_complexity Low_complexity 1 22 0 1 606 22 0 0 0 chr2L 2872639 2872661 -20138883 + AT_rich Low_complexity Low_complexity 1 22 0 1 606 230 107 17 67 chr2L 2874584 2874644 -20136900 + (CTATA)n Simple_repeat Simple_repeat 1 57 0 1 606 215 267 0 0 chr2L 2879296 2879341 -20132203 + (CGG)n Simple_repeat Simple_repeat 2 46 0 1 606 218 60 100 0 chr2L 2881076 2881126 -20130418 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 607 235 192 0 25 chr2L 2886181 2886261 -20125283 + (TG)n Simple_repeat Simple_repeat 1 78 0 1 607 206 193 0 17 chr2L 2886644 2886702 -20124842 + CT-rich Low_complexity Low_complexity 1 57 0 1 607 201 74 0 0 chr2L 2886929 2886956 -20124588 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 607 214 250 0 30 chr2L 2888486 2888552 -20122992 + A-rich Low_complexity Low_complexity 1 64 0 1 607 208 145 0 52 chr2L 2889902 2889960 -20121584 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1 607 192 97 0 0 chr2L 2890426 2890457 -20121087 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1 607 264 175 0 0 chr2L 2891398 2891461 -20120083 + (CAAA)n Simple_repeat Simple_repeat 4 66 0 1 607 186 191 0 0 chr2L 2892802 2892844 -20118700 + (CAACC)n Simple_repeat Simple_repeat 4 45 0 1 607 183 100 0 0 chr2L 2893049 2893079 -20118465 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 607 180 0 0 0 chr2L 2894123 2894143 -20117401 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 1 607 204 40 0 0 chr2L 2898475 2898500 -20113044 + (CAGT)n Simple_repeat Simple_repeat 3 27 0 1 607 243 0 0 0 chr2L 2898870 2898897 -20112647 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 607 35 41 0 0 chr2L 2905152 2905201 -20106343 + AT_rich Low_complexity Low_complexity 1 49 0 1 607 228 35 0 0 chr2L 2909036 2909065 -20102479 + (TTG)n Simple_repeat Simple_repeat 1 29 0 1 607 198 0 0 0 chr2L 2910362 2910384 -20101160 + (CAGTT)n Simple_repeat Simple_repeat 3 24 0 1 607 189 0 0 0 chr2L 2910508 2910529 -20101015 + (GAAA)n Simple_repeat Simple_repeat 1 21 0 1 607 237 236 11 33 chr2L 2911042 2911134 -20100410 + (CAA)n Simple_repeat Simple_repeat 2 91 0 1 607 180 152 0 0 chr2L 2912064 2912097 -20099447 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 607 189 0 0 0 chr2L 2914296 2914317 -20097227 + (GATTG)n Simple_repeat Simple_repeat 1 21 0 1 607 402 100 0 0 chr2L 2915101 2915161 -20096383 + (CAG)n Simple_repeat Simple_repeat 3 62 0 1 607 241 265 0 42 chr2L 2915515 2915586 -20095958 + (CATATA)n Simple_repeat Simple_repeat 5 72 0 1 607 300 70 0 0 chr2L 2915876 2915919 -20095625 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 1 607 252 86 0 0 chr2L 2916964 2916999 -20094545 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 607 202 195 0 0 chr2L 2918184 2918225 -20093319 + GA-rich Low_complexity Low_complexity 2 42 0 1 607 257 155 0 17 chr2L 2918387 2918446 -20093098 + (CAT)n Simple_repeat Simple_repeat 1 58 0 1 607 201 39 0 0 chr2L 2920104 2920130 -20091414 + (CAGTT)n Simple_repeat Simple_repeat 2 27 0 1 607 22 35 0 0 chr2L 2920760 2920789 -20090755 + AT_rich Low_complexity Low_complexity 1 29 0 1 607 25 0 0 0 chr2L 2921522 2921547 -20089997 + AT_rich Low_complexity Low_complexity 1 25 0 1 607 26 30 0 0 chr2L 2921696 2921729 -20089815 + AT_rich Low_complexity Low_complexity 1 33 0 1 607 231 133 0 0 chr2L 2924610 2924655 -20086889 + (TTTTTA)n Simple_repeat Simple_repeat 2 46 0 1 607 195 42 0 0 chr2L 2926071 2926095 -20085449 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 607 237 33 0 0 chr2L 2926309 2926339 -20085205 + (CGAAT)n Simple_repeat Simple_repeat 5 34 0 1 607 21 0 0 0 chr2L 2931958 2931979 -20079565 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 19669 0 0 1 chr2L 2933353 2935475 -20076069 - POGO DNA Pogo 0 2121 1 1 607 276 77 0 0 chr2L 2935923 2935962 -20075582 + (GAGAA)n Simple_repeat Simple_repeat 2 40 0 1 607 192 40 0 0 chr2L 2941312 2941337 -20070207 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 607 21 36 0 0 chr2L 2944694 2944722 -20066822 + AT_rich Low_complexity Low_complexity 1 28 0 1 607 192 40 0 0 chr2L 2945055 2945080 -20066464 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 607 180 238 0 0 chr2L 2945303 2945366 -20066178 + (CAA)n Simple_repeat Simple_repeat 1 63 0 1 607 252 228 0 117 chr2L 2945631 2945785 -20065759 + ROO_I LTR Pao 641 776 -7480 1 607 229 242 32 0 chr2L 2945813 2945875 -20065669 + (TCTCTG)n Simple_repeat Simple_repeat 2 65 0 1 607 22 0 0 0 chr2L 2947179 2947201 -20064343 + GC_rich Low_complexity Low_complexity 1 22 0 1 607 229 228 15 82 chr2L 2948299 2948433 -20063111 + ROO_I LTR Pao 639 763 -7493 1 607 32 0 0 0 chr2L 2952954 2952986 -20058558 + AT_rich Low_complexity Low_complexity 1 32 0 1 607 30 27 0 0 chr2L 2953029 2953066 -20058478 + AT_rich Low_complexity Low_complexity 1 37 0 1 607 218 132 19 0 chr2L 2953896 2953949 -20057595 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 607 261 75 0 0 chr2L 2954033 2954073 -20057471 + (CAA)n Simple_repeat Simple_repeat 3 42 0 1 607 184 77 0 49 chr2L 2954129 2954170 -20057374 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 1 607 180 77 0 0 chr2L 2958276 2958302 -20053242 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 607 225 241 0 18 chr2L 2960467 2960522 -20051022 + (CAGC)n Simple_repeat Simple_repeat 4 57 0 1 607 279 213 0 0 chr2L 2961466 2961541 -20050003 + (CAA)n Simple_repeat Simple_repeat 1 75 0 1 607 251 234 62 0 chr2L 2963474 2963538 -20048006 + ROO_I LTR Pao 658 725 -7531 1 607 28 86 0 0 chr2L 2966452 2966522 -20045022 + AT_rich Low_complexity Low_complexity 1 70 0 1 607 204 118 29 0 chr2L 2966910 2966944 -20044600 + (CGAAA)n Simple_repeat Simple_repeat 1 35 0 1 607 22 0 0 0 chr2L 2967657 2967679 -20043865 + AT_rich Low_complexity Low_complexity 1 22 0 1 607 21 0 0 0 chr2L 2972774 2972795 -20038749 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 216 131 21 21 chr2L 2975358 2975405 -20036139 + (CAT)n Simple_repeat Simple_repeat 3 49 0 1 607 34 89 0 0 chr2L 2978395 2978485 -20033059 + AT_rich Low_complexity Low_complexity 1 90 0 1 607 24 0 0 0 chr2L 2979437 2979461 -20032083 + AT_rich Low_complexity Low_complexity 1 24 0 1 607 207 0 0 0 chr2L 2979462 2979485 -20032059 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 607 25 31 0 0 chr2L 2979509 2979541 -20032003 + AT_rich Low_complexity Low_complexity 1 32 0 1 607 22 0 0 0 chr2L 2987813 2987835 -20023709 + AT_rich Low_complexity Low_complexity 1 22 0 1 607 25 51 0 0 chr2L 2997421 2997460 -20014084 + AT_rich Low_complexity Low_complexity 1 39 0 1 607 215 213 0 0 chr2L 2999920 2999967 -20011577 + GA-rich Low_complexity Low_complexity 1 47 0 1 607 311 148 0 62 chr2L 3004388 3004453 -20007091 - DNAREP1_DM LINE Penelope -2 592 532 1 607 450 82 0 0 chr2L 3004457 3004518 -20007026 - DNAREP1_DM LINE Penelope -532 62 2 1 607 192 125 0 0 chr2L 3004677 3004709 -20006835 + (CCAA)n Simple_repeat Simple_repeat 3 34 0 1 607 210 71 0 0 chr2L 3008322 3008350 -20003194 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 1 607 180 0 0 0 chr2L 3009327 3009347 -20002197 + (CAATC)n Simple_repeat Simple_repeat 3 22 0 1 607 22 35 0 0 chr2L 3009775 3009804 -20001740 + AT_rich Low_complexity Low_complexity 1 29 0 1 607 21 0 0 0 chr2L 3010461 3010482 -20001062 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 196 77 0 49 chr2L 3010571 3010612 -20000932 + (TTTTTA)n Simple_repeat Simple_repeat 5 43 0 1 607 239 190 17 33 chr2L 3013513 3013573 -19997971 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 607 219 114 0 0 chr2L 3013672 3013707 -19997837 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 607 183 156 0 0 chr2L 3014180 3014212 -19997332 + (CAG)n Simple_repeat Simple_repeat 2 33 0 1 608 294 73 0 0 chr2L 3015156 3015197 -19996347 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 608 195 100 0 0 chr2L 3020625 3020655 -19990889 + (CAG)n Simple_repeat Simple_repeat 3 32 0 1 608 200 200 0 0 chr2L 3028600 3028640 -19982904 + CT-rich Low_complexity Low_complexity 2 41 0 1 608 22 0 0 0 chr2L 3030383 3030405 -19981139 + AT_rich Low_complexity Low_complexity 1 22 0 1 608 26 30 0 0 chr2L 3032253 3032286 -19979258 + AT_rich Low_complexity Low_complexity 1 33 0 1 608 28 29 0 0 chr2L 3038870 3038905 -19972639 + AT_rich Low_complexity Low_complexity 1 35 0 1 608 584 251 43 10 chr2L 3045934 3046143 -19965401 + XDMR Unknown Unknown 145 360 -1 1 608 660 281 15 13 chr2L 3045974 3046295 -19965249 - SAR_DM Satellite Satellite -587 885 623 1 608 24 32 0 0 chr2L 3049079 3049110 -19962434 + AT_rich Low_complexity Low_complexity 1 31 0 1 608 198 71 0 0 chr2L 3058626 3058654 -19952890 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 608 2442 0 0 0 chr2L 3073086 3073362 -19938182 + Copia_LTR LTR Copia 1 276 0 1 608 41886 0 0 0 chr2L 3073362 3077955 -19933589 + Copia_I LTR Copia 1 4593 0 1 608 2442 0 0 0 chr2L 3077955 3078231 -19933313 + Copia_LTR LTR Copia 1 276 0 1 608 28 48 0 0 chr2L 3080896 3080938 -19930606 + AT_rich Low_complexity Low_complexity 1 42 0 1 608 26 0 0 0 chr2L 3080949 3080975 -19930569 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 192 40 0 0 chr2L 3081898 3081923 -19929621 + (CAGC)n Simple_repeat Simple_repeat 1 25 0 1 608 227 208 0 0 chr2L 3095577 3095625 -19915919 + A-rich Low_complexity Low_complexity 1 48 0 1 608 22 35 0 0 chr2L 3103279 3103308 -19908236 + AT_rich Low_complexity Low_complexity 1 29 0 1 608 21 0 0 0 chr2L 3110962 3110983 -19900561 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 183 80 0 0 chr2L 3111843 3111868 -19899676 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 608 32 0 0 0 chr2L 3112244 3112276 -19899268 + AT_rich Low_complexity Low_complexity 1 32 0 1 608 186 133 0 0 chr2L 3112864 3112894 -19898650 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 1 608 33 56 0 0 chr2L 3115735 3115789 -19895755 + AT_rich Low_complexity Low_complexity 1 54 0 1 608 32 26 0 0 chr2L 3117334 3117373 -19894171 + AT_rich Low_complexity Low_complexity 1 39 0 1 608 261 235 0 0 chr2L 3124322 3124390 -19887154 + (CCCGAA)n Simple_repeat Simple_repeat 3 70 0 1 608 230 211 0 0 chr2L 3124721 3124759 -19886785 + (CCG)n Simple_repeat Simple_repeat 1 38 0 1 608 228 100 0 0 chr2L 3127661 3127701 -19883843 + (TGG)n Simple_repeat Simple_repeat 2 41 0 1 608 24 53 0 0 chr2L 3136648 3136686 -19874858 + AT_rich Low_complexity Low_complexity 1 38 0 1 608 23 78 0 0 chr2L 3138818 3138869 -19872675 + AT_rich Low_complexity Low_complexity 1 51 0 1 608 26 0 0 0 chr2L 3140156 3140182 -19871362 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 21 0 0 0 chr2L 3141718 3141739 -19869805 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 22 0 0 0 chr2L 3145811 3145833 -19865711 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 25 31 0 0 chr2L 3146290 3146322 -19865222 + AT_rich Low_complexity Low_complexity 1 32 0 1 609 233 241 72 0 chr2L 3149112 3149195 -19862349 - ROO_I LTR Pao -7525 731 643 1 609 186 43 0 0 chr2L 3149195 3149218 -19862326 + (TGG)n Simple_repeat Simple_repeat 1 23 0 1 609 23 0 0 0 chr2L 3152451 3152474 -19859070 + AT_rich Low_complexity Low_complexity 1 23 0 1 609 372 111 0 0 chr2L 3152807 3152870 -19858674 + (ACTG)n Simple_repeat Simple_repeat 4 66 0 1 609 24 0 0 0 chr2L 3156503 3156527 -19855017 + AT_rich Low_complexity Low_complexity 1 24 0 1 609 24 32 0 0 chr2L 3157081 3157112 -19854432 + AT_rich Low_complexity Low_complexity 1 31 0 1 609 252 0 0 0 chr2L 3157449 3157477 -19854067 + (CCAA)n Simple_repeat Simple_repeat 3 30 0 1 609 22 0 0 0 chr2L 3159062 3159084 -19852460 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 194 62 31 0 chr2L 3159118 3159150 -19852394 + (TTTTTG)n Simple_repeat Simple_repeat 1 33 0 1 609 237 108 0 0 chr2L 3159301 3159338 -19852206 + (CAA)n Simple_repeat Simple_repeat 3 39 0 1 609 22 56 0 0 chr2L 3159732 3159768 -19851776 + AT_rich Low_complexity Low_complexity 1 36 0 1 609 25 0 0 0 chr2L 3169870 3169895 -19841649 + AT_rich Low_complexity Low_complexity 1 25 0 1 609 279 29 0 0 chr2L 3171380 3171415 -19840129 - PROTOP_B DNA P -614 539 505 1 609 22 0 0 0 chr2L 3172907 3172929 -19838615 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 21 0 0 0 chr2L 3174733 3174754 -19836790 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 224 100 0 24 chr2L 3176880 3176921 -19834623 + (TTCGG)n Simple_repeat Simple_repeat 4 43 0 1 609 204 40 0 0 chr2L 3178945 3178970 -19832574 + (TAAAAA)n Simple_repeat Simple_repeat 3 27 0 1 609 21 0 0 0 chr2L 3181420 3181441 -19830103 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 210 158 0 0 chr2L 3185633 3185671 -19825873 + T-rich Low_complexity Low_complexity 1 38 0 1 609 22 0 0 0 chr2L 3187070 3187092 -19824452 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 24 53 0 0 chr2L 3188263 3188301 -19823243 + AT_rich Low_complexity Low_complexity 1 38 0 1 609 25 0 0 0 chr2L 3191698 3191723 -19819821 + AT_rich Low_complexity Low_complexity 1 25 0 1 609 22 0 0 0 chr2L 3196110 3196132 -19815412 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 21 36 0 0 chr2L 3197424 3197452 -19814092 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 22 56 0 0 chr2L 3199926 3199962 -19811582 + AT_rich Low_complexity Low_complexity 1 36 0 1 609 252 111 0 0 chr2L 3202250 3202295 -19809249 + (CTG)n Simple_repeat Simple_repeat 2 46 0 1 609 2930 17 0 3 chr2L 3202793 3203150 -19808394 - MDG1_LTR LTR Gypsy 0 442 87 1 609 423 100 0 0 chr2L 3203150 3203220 -19808324 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 609 53568 7 18 1 chr2L 3203224 3209722 -19801822 - MDG1_I LTR Gypsy -98 6799 1 1 609 2930 17 0 3 chr2L 3209722 3210079 -19801465 - MDG1_LTR LTR Gypsy 0 442 87 1 609 423 100 0 0 chr2L 3210079 3210149 -19801395 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 609 186 43 0 0 chr2L 3210544 3210567 -19800977 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 1 609 45 45 0 0 chr2L 3211425 3211491 -19800053 + AT_rich Low_complexity Low_complexity 1 66 0 1 609 258 32 0 0 chr2L 3216439 3216470 -19795074 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 609 22 0 0 0 chr2L 3217315 3217337 -19794207 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 234 278 14 14 chr2L 3218458 3218531 -19793013 + (TATG)n Simple_repeat Simple_repeat 1 73 0 1 609 219 114 0 0 chr2L 3219228 3219263 -19792281 + (TTTTC)n Simple_repeat Simple_repeat 4 38 0 1 609 186 222 0 0 chr2L 3219750 3219804 -19791740 + T-rich Low_complexity Low_complexity 1 54 0 1 609 23 33 0 0 chr2L 3220155 3220185 -19791359 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 21 36 0 0 chr2L 3221863 3221891 -19789653 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 30 0 0 0 chr2L 3224314 3224344 -19787200 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 23 68 0 0 chr2L 3234408 3234452 -19777092 + AT_rich Low_complexity Low_complexity 1 44 0 1 609 22 35 0 0 chr2L 3238757 3238786 -19772758 + AT_rich Low_complexity Low_complexity 1 29 0 1 609 490 271 22 22 chr2L 3239126 3239349 -19772195 - SAR_DM Satellite Satellite -640 832 610 1 609 213 121 0 0 chr2L 3248284 3248317 -19763227 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 609 194 128 26 0 chr2L 3251424 3251463 -19760081 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 609 2198 108 57 62 chr2L 3251548 3251952 -19759592 + Gypsy6_LTR LTR Gypsy 1 402 -5 1 609 18246 231 18 26 chr2L 3251968 3258650 -19752894 + Gypsy6_I LTR Gypsy 27 7012 0 1 609 2218 108 57 62 chr2L 3258652 3259058 -19752486 + Gypsy6_LTR LTR Gypsy 1 404 -3 1 609 26 0 0 0 chr2L 3267021 3267047 -19744497 + AT_rich Low_complexity Low_complexity 1 26 0 1 609 23 0 0 0 chr2L 3269059 3269082 -19742462 + AT_rich Low_complexity Low_complexity 1 23 0 1 609 435 180 0 0 chr2L 3270189 3270289 -19741255 + HOBO DNA hAT 1859 1958 -1058 1 609 21 36 0 0 chr2L 3271632 3271660 -19739884 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 28 29 0 0 chr2L 3273010 3273045 -19738499 + AT_rich Low_complexity Low_complexity 1 35 0 1 609 189 0 0 0 chr2L 3274236 3274257 -19737287 + (G)n Simple_repeat Simple_repeat 1 21 0 1 609 24 0 0 0 chr2L 3274727 3274751 -19736793 + AT_rich Low_complexity Low_complexity 1 24 0 1 610 207 49 73 0 chr2L 3283983 3284024 -19727520 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 610 21 0 0 0 chr2L 3294943 3294964 -19716580 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 207 88 0 0 chr2L 3307359 3307393 -19704151 + (A)n Simple_repeat Simple_repeat 1 34 0 1 610 35 0 0 0 chr2L 3312349 3312384 -19699160 + AT_rich Low_complexity Low_complexity 1 35 0 1 610 21 0 0 0 chr2L 3314575 3314596 -19696948 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 21 71 0 0 chr2L 3320031 3320073 -19691471 + AT_rich Low_complexity Low_complexity 1 42 0 1 610 26 64 0 0 chr2L 3329750 3329797 -19681747 + AT_rich Low_complexity Low_complexity 1 47 0 1 610 249 33 0 0 chr2L 3335274 3335304 -19676240 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 610 205 191 0 0 chr2L 3335615 3335657 -19675887 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 610 27 29 0 0 chr2L 3338451 3338485 -19673059 + AT_rich Low_complexity Low_complexity 1 34 0 1 610 241 203 17 17 chr2L 3339168 3339228 -19672316 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 610 205 195 0 0 chr2L 3341128 3341169 -19670375 + T-rich Low_complexity Low_complexity 1 41 0 1 610 267 140 0 0 chr2L 3341460 3341510 -19670034 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 610 21 0 0 0 chr2L 3341691 3341712 -19669832 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 21 0 0 0 chr2L 3342101 3342122 -19669422 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 285 29 0 0 chr2L 3345830 3345864 -19665680 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 610 330 26 0 0 chr2L 3346492 3346531 -19665013 + (ACTG)n Simple_repeat Simple_repeat 2 40 0 1 610 282 56 0 0 chr2L 3351506 3351542 -19660002 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 610 201 154 0 0 chr2L 3352702 3352741 -19658803 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 610 321 170 28 83 chr2L 3353048 3353157 -19658387 - ROO_I LTR Pao -7510 746 644 1 610 477 138 0 0 chr2L 3353211 3353305 -19658239 + (CTG)n Simple_repeat Simple_repeat 1 94 0 1 610 180 0 0 0 chr2L 3353564 3353584 -19657960 + (TTTCG)n Simple_repeat Simple_repeat 3 22 0 1 610 21 0 0 0 chr2L 3354125 3354146 -19657398 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 22 70 0 0 chr2L 3355099 3355142 -19656402 + AT_rich Low_complexity Low_complexity 1 43 0 1 610 207 163 20 20 chr2L 3356452 3356502 -19655042 + T-rich Low_complexity Low_complexity 3 52 0 1 610 22 0 0 0 chr2L 3358629 3358651 -19652893 + AT_rich Low_complexity Low_complexity 1 22 0 1 610 259 259 0 0 chr2L 3361208 3361293 -19650251 + (CTG)n Simple_repeat Simple_repeat 2 86 0 1 610 236 261 0 0 chr2L 3362440 3362509 -19649035 + (ATG)n Simple_repeat Simple_repeat 1 69 0 1 610 180 200 0 0 chr2L 3362524 3362569 -19648975 + (ATGGTG)n Simple_repeat Simple_repeat 1 45 0 1 610 192 167 0 0 chr2L 3362906 3362954 -19648590 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 610 22 35 0 0 chr2L 3365145 3365174 -19646370 + AT_rich Low_complexity Low_complexity 1 29 0 1 610 255 61 0 0 chr2L 3366007 3366040 -19645504 + (T)n Simple_repeat Simple_repeat 1 33 0 1 610 218 282 0 37 chr2L 3367994 3368075 -19643469 + (CTGGGG)n Simple_repeat Simple_repeat 2 79 0 1 610 25 31 0 0 chr2L 3376626 3376658 -19634886 + AT_rich Low_complexity Low_complexity 1 32 0 1 610 21 0 0 0 chr2L 3380729 3380750 -19630794 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 31 26 0 0 chr2L 3386879 3386917 -19624627 + AT_rich Low_complexity Low_complexity 1 38 0 1 610 21 36 0 0 chr2L 3387364 3387392 -19624152 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 1606 0 0 0 chr2L 3388652 3388838 -19622706 + POGON1 DNA Pogo 1 186 0 1 610 28 0 0 0 chr2L 3389809 3389837 -19621707 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 21 36 0 0 chr2L 3390296 3390324 -19621220 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 22 0 0 0 chr2L 3391180 3391202 -19620342 + AT_rich Low_complexity Low_complexity 1 22 0 1 610 22 0 0 0 chr2L 3392019 3392041 -19619503 + AT_rich Low_complexity Low_complexity 1 22 0 1 610 452 185 0 0 chr2L 3394551 3394643 -19616901 - DNAREP1_DM LINE Penelope -1 593 502 1 610 26 0 0 0 chr2L 3400277 3400303 -19611241 + AT_rich Low_complexity Low_complexity 1 26 0 1 610 564 271 12 12 chr2L 3402063 3402310 -19609234 + SAR_DM Satellite Satellite 547 793 -679 1 610 25 65 0 0 chr2L 3403041 3403087 -19608457 + AT_rich Low_complexity Low_complexity 1 46 0 1 610 225 0 0 0 chr2L 3405367 3405392 -19606152 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 611 180 0 0 0 chr2L 3414997 3415017 -19596527 + (A)n Simple_repeat Simple_repeat 1 20 0 1 611 24 53 0 0 chr2L 3415589 3415627 -19595917 + AT_rich Low_complexity Low_complexity 1 38 0 1 611 25 0 0 0 chr2L 3415767 3415792 -19595752 + AT_rich Low_complexity Low_complexity 1 25 0 1 611 344 291 0 48 chr2L 3416884 3417072 -19594472 + (CAG)n Simple_repeat Simple_repeat 2 180 0 1 611 311 312 0 34 chr2L 3417149 3417325 -19594219 + (CAG)n Simple_repeat Simple_repeat 3 172 0 1 611 180 77 0 0 chr2L 3417511 3417537 -19594007 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 611 36 0 0 0 chr2L 3420055 3420091 -19591453 + AT_rich Low_complexity Low_complexity 1 36 0 1 611 31 0 0 0 chr2L 3420498 3420529 -19591015 + AT_rich Low_complexity Low_complexity 1 31 0 1 611 207 69 0 0 chr2L 3421738 3421767 -19589777 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 611 22 0 0 0 chr2L 3423371 3423393 -19588151 + AT_rich Low_complexity Low_complexity 1 22 0 1 611 180 0 0 0 chr2L 3424928 3424948 -19586596 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 611 186 43 0 0 chr2L 3428488 3428511 -19583033 + (A)n Simple_repeat Simple_repeat 1 23 0 1 611 207 0 0 0 chr2L 3430464 3430487 -19581057 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1 611 23 0 0 0 chr2L 3433056 3433079 -19578465 + AT_rich Low_complexity Low_complexity 1 23 0 1 611 21 0 0 0 chr2L 3433757 3433778 -19577766 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 23 54 0 0 chr2L 3435975 3436012 -19575532 + AT_rich Low_complexity Low_complexity 1 37 0 1 611 21 36 0 0 chr2L 3439790 3439818 -19571726 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 270 0 0 0 chr2L 3440049 3440079 -19571465 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 611 198 0 0 0 chr2L 3440726 3440748 -19570796 + (CGGT)n Simple_repeat Simple_repeat 3 24 0 1 611 186 133 0 0 chr2L 3444159 3444189 -19567355 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 611 30 27 0 0 chr2L 3444638 3444675 -19566869 + AT_rich Low_complexity Low_complexity 1 37 0 1 611 180 0 0 0 chr2L 3448610 3448630 -19562914 + (G)n Simple_repeat Simple_repeat 1 20 0 1 611 21 36 0 0 chr2L 3452010 3452038 -19559506 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 37 0 0 0 chr2L 3452355 3452392 -19559152 + AT_rich Low_complexity Low_complexity 1 37 0 1 611 1507 80 210 2 chr2L 3462722 3463113 -19548431 + DNAREP1_DM LINE Penelope 1 594 0 1 611 26 30 0 0 chr2L 3472340 3472373 -19539171 + AT_rich Low_complexity Low_complexity 1 33 0 1 611 180 0 0 0 chr2L 3483141 3483161 -19528383 + (CTG)n Simple_repeat Simple_repeat 3 22 0 1 611 21 57 0 0 chr2L 3485664 3485699 -19525845 + AT_rich Low_complexity Low_complexity 1 35 0 1 611 26 0 0 0 chr2L 3486400 3486426 -19525118 + AT_rich Low_complexity Low_complexity 1 26 0 1 611 21 0 0 0 chr2L 3490331 3490352 -19521192 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 21 36 0 0 chr2L 3490454 3490482 -19521062 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 26 0 0 0 chr2L 3492252 3492278 -19519266 + AT_rich Low_complexity Low_complexity 1 26 0 1 611 26 30 0 0 chr2L 3495379 3495412 -19516132 + AT_rich Low_complexity Low_complexity 1 33 0 1 611 28 0 0 0 chr2L 3497090 3497118 -19514426 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 230 229 16 0 chr2L 3497719 3497780 -19513764 + (CTG)n Simple_repeat Simple_repeat 1 62 0 1 611 34 24 0 0 chr2L 3502156 3502197 -19509347 + AT_rich Low_complexity Low_complexity 1 41 0 1 611 28 29 0 0 chr2L 3505654 3505689 -19505855 + AT_rich Low_complexity Low_complexity 1 35 0 1 611 203 81 54 0 chr2L 3507600 3507637 -19503907 + (CTTTA)n Simple_repeat Simple_repeat 5 43 0 1 611 23 68 0 0 chr2L 3508410 3508454 -19503090 + AT_rich Low_complexity Low_complexity 1 44 0 1 611 21 71 0 0 chr2L 3514676 3514718 -19496826 + AT_rich Low_complexity Low_complexity 1 42 0 1 611 26 30 0 0 chr2L 3514726 3514759 -19496785 + AT_rich Low_complexity Low_complexity 1 33 0 1 611 23 33 0 0 chr2L 3517282 3517312 -19494232 + AT_rich Low_complexity Low_complexity 1 30 0 1 611 180 0 0 0 chr2L 3518624 3518644 -19492900 + (CTGGGG)n Simple_repeat Simple_repeat 1 20 0 1 611 31 0 0 0 chr2L 3519506 3519537 -19492007 + AT_rich Low_complexity Low_complexity 1 31 0 1 611 21 0 0 0 chr2L 3524744 3524765 -19486779 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 29 0 0 0 chr2L 3528759 3528788 -19482756 + AT_rich Low_complexity Low_complexity 1 29 0 1 611 24 53 0 0 chr2L 3533831 3533869 -19477675 + AT_rich Low_complexity Low_complexity 1 38 0 1 611 220 213 0 21 chr2L 3534075 3534123 -19477421 + GA-rich Low_complexity Low_complexity 1 47 0 1 611 203 263 0 0 chr2L 3534150 3534207 -19477337 + (TTG)n Simple_repeat Simple_repeat 1 57 0 1 611 225 94 0 0 chr2L 3534398 3534430 -19477114 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 611 26 0 0 0 chr2L 3536516 3536542 -19475002 + AT_rich Low_complexity Low_complexity 1 26 0 1 611 27 49 0 0 chr2L 3536605 3536646 -19474898 + AT_rich Low_complexity Low_complexity 1 41 0 1 611 279 250 0 0 chr2L 3537265 3537337 -19474207 + (CAT)n Simple_repeat Simple_repeat 3 74 0 1 611 22 0 0 0 chr2L 3537496 3537518 -19474026 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 24 0 0 0 chr2L 3539284 3539308 -19472236 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 25 0 0 0 chr2L 3544864 3544889 -19466655 + AT_rich Low_complexity Low_complexity 1 25 0 1 612 252 122 0 0 chr2L 3544950 3544991 -19466553 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 612 22 0 0 0 chr2L 3546774 3546796 -19464748 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 266 227 26 13 chr2L 3547159 3547235 -19464309 + ROO_I LTR Pao 646 722 -7534 1 612 38 39 0 0 chr2L 3547889 3547941 -19463603 + AT_rich Low_complexity Low_complexity 1 52 0 1 612 212 59 0 29 chr2L 3548038 3548073 -19463471 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1 612 26 0 0 0 chr2L 3556927 3556953 -19454591 + AT_rich Low_complexity Low_complexity 1 26 0 1 612 183 114 0 0 chr2L 3557895 3557930 -19453614 + (TGGA)n Simple_repeat Simple_repeat 1 35 0 1 612 198 0 0 0 chr2L 3561951 3561973 -19449571 + (CGAAT)n Simple_repeat Simple_repeat 3 24 0 1 612 192 77 0 0 chr2L 3563509 3563535 -19448009 + (CTAG)n Simple_repeat Simple_repeat 3 28 0 1 612 286 283 47 27 chr2L 3568507 3568656 -19442888 - XDMR Unknown Unknown -209 152 1 1 612 1138 285 54 31 chr2L 3568529 3569401 -19442143 + SAR_DM Satellite Satellite 228 1119 -353 1 612 309 145 0 0 chr2L 3572859 3572921 -19438623 + (GTATG)n Simple_repeat Simple_repeat 5 66 0 1 612 207 217 0 0 chr2L 3579574 3579634 -19431910 + (CTG)n Simple_repeat Simple_repeat 1 60 0 1 612 305 315 23 18 chr2L 3579817 3580037 -19431507 + (CTG)n Simple_repeat Simple_repeat 1 221 0 1 612 183 100 0 0 chr2L 3580126 3580156 -19431388 + (CAG)n Simple_repeat Simple_repeat 3 32 0 1 612 21 0 0 0 chr2L 3586937 3586958 -19424586 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 22 0 0 0 chr2L 3589579 3589601 -19421943 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 22 0 0 0 chr2L 3591055 3591077 -19420467 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 180 111 0 0 chr2L 3591733 3591760 -19419784 + (CAG)n Simple_repeat Simple_repeat 1 27 0 1 612 276 137 0 0 chr2L 3594304 3594355 -19417189 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 612 204 97 0 0 chr2L 3595677 3595708 -19415836 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 612 200 283 0 0 chr2L 3596496 3596556 -19414988 + (CTG)n Simple_repeat Simple_repeat 1 60 0 1 612 180 77 0 0 chr2L 3598300 3598326 -19413218 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 612 189 0 0 0 chr2L 3598908 3598929 -19412615 + (GAA)n Simple_repeat Simple_repeat 3 23 0 1 612 22 0 0 0 chr2L 3604437 3604459 -19407085 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 192 77 0 0 chr2L 3605723 3605749 -19405795 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 612 325 204 34 0 chr2L 3605848 3605936 -19405608 - ROO_I LTR Pao -7532 724 634 1 612 210 220 0 0 chr2L 3606651 3606710 -19404834 + (CTG)n Simple_repeat Simple_repeat 1 59 0 1 612 435 160 0 57 chr2L 3607056 3607162 -19404382 - ROO_I LTR Pao -7516 740 641 1 612 186 43 0 0 chr2L 3609007 3609030 -19402514 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 612 228 143 0 0 chr2L 3616219 3616261 -19395283 + (CGAAT)n Simple_repeat Simple_repeat 3 44 0 1 612 27 62 0 0 chr2L 3618780 3618828 -19392716 + AT_rich Low_complexity Low_complexity 1 48 0 1 612 24 0 0 0 chr2L 3629771 3629795 -19381749 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 22 80 0 0 chr2L 3633912 3633962 -19377582 + AT_rich Low_complexity Low_complexity 1 50 0 1 612 22 35 0 0 chr2L 3635343 3635372 -19376172 + AT_rich Low_complexity Low_complexity 1 29 0 1 612 21 36 0 0 chr2L 3635700 3635728 -19375816 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 22 0 0 0 chr2L 3637493 3637515 -19374029 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 204 231 0 0 chr2L 3639808 3639847 -19371697 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1 612 23 0 0 0 chr2L 3640668 3640691 -19370853 + AT_rich Low_complexity Low_complexity 1 23 0 1 612 22 70 0 0 chr2L 3641674 3641717 -19369827 + AT_rich Low_complexity Low_complexity 1 43 0 1 612 201 94 0 0 chr2L 3642118 3642150 -19369394 + (TGGG)n Simple_repeat Simple_repeat 4 35 0 1 612 198 118 0 0 chr2L 3643911 3643945 -19367599 + (CATTC)n Simple_repeat Simple_repeat 1 34 0 1 612 211 220 0 0 chr2L 3646008 3646058 -19365486 + T-rich Low_complexity Low_complexity 1 50 0 1 612 23 68 0 0 chr2L 3647451 3647495 -19364049 + AT_rich Low_complexity Low_complexity 1 44 0 1 612 27 0 0 0 chr2L 3647937 3647964 -19363580 + AT_rich Low_complexity Low_complexity 1 27 0 1 612 2442 0 0 0 chr2L 3649842 3650118 -19361426 + Copia_LTR LTR Copia 1 276 0 1 612 41840 1 0 0 chr2L 3650118 3654711 -19356833 + Copia_I LTR Copia 1 4593 0 1 612 2442 0 0 0 chr2L 3654711 3654987 -19356557 + Copia_LTR LTR Copia 1 276 0 1 612 24 32 0 0 chr2L 3656793 3656824 -19354720 + AT_rich Low_complexity Low_complexity 1 31 0 1 612 22 0 0 0 chr2L 3657027 3657049 -19354495 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 362 207 24 0 chr2L 3657710 3657792 -19353752 - DNAREP1_DM LINE Penelope -11 583 500 1 612 23 0 0 0 chr2L 3657875 3657898 -19353646 + AT_rich Low_complexity Low_complexity 1 23 0 1 612 26 0 0 0 chr2L 3659392 3659418 -19352126 + AT_rich Low_complexity Low_complexity 1 26 0 1 612 21 0 0 0 chr2L 3661442 3661463 -19350081 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 27 62 0 0 chr2L 3664562 3664610 -19346934 + AT_rich Low_complexity Low_complexity 1 48 0 1 612 25 31 0 0 chr2L 3666632 3666664 -19344880 + AT_rich Low_complexity Low_complexity 1 32 0 1 612 23 0 0 0 chr2L 3667449 3667472 -19344072 + AT_rich Low_complexity Low_complexity 1 23 0 1 612 22 56 0 0 chr2L 3669939 3669975 -19341569 + AT_rich Low_complexity Low_complexity 1 36 0 1 613 201 121 0 0 chr2L 3671009 3671042 -19340502 + (CTCTG)n Simple_repeat Simple_repeat 3 35 0 1 613 204 233 0 0 chr2L 3672999 3673042 -19338502 + (CAT)n Simple_repeat Simple_repeat 3 45 0 1 613 24 53 0 0 chr2L 3677331 3677369 -19334175 + AT_rich Low_complexity Low_complexity 1 38 0 1 613 31 44 0 0 chr2L 3677890 3677935 -19333609 + AT_rich Low_complexity Low_complexity 1 45 0 1 613 28 0 0 0 chr2L 3680152 3680180 -19331364 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 21 57 0 0 chr2L 3688460 3688495 -19323049 + AT_rich Low_complexity Low_complexity 1 35 0 1 613 22 0 0 0 chr2L 3690688 3690710 -19320834 + AT_rich Low_complexity Low_complexity 1 22 0 1 613 841 86 316 0 chr2L 3695888 3696097 -19315447 + DMRP1 Unknown Unknown 3 277 -69 1 613 25 51 0 0 chr2L 3697255 3697294 -19314250 + AT_rich Low_complexity Low_complexity 1 39 0 1 613 234 62 0 0 chr2L 3698921 3698953 -19312591 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 613 29 78 0 0 chr2L 3699842 3699906 -19311638 + AT_rich Low_complexity Low_complexity 1 64 0 1 613 32 57 0 0 chr2L 3700008 3700061 -19311483 + AT_rich Low_complexity Low_complexity 1 53 0 1 613 25 0 0 0 chr2L 3700782 3700807 -19310737 + AT_rich Low_complexity Low_complexity 1 25 0 1 613 30 0 0 0 chr2L 3701010 3701040 -19310504 + AT_rich Low_complexity Low_complexity 1 30 0 1 613 23 54 0 0 chr2L 3704209 3704246 -19307298 + AT_rich Low_complexity Low_complexity 1 37 0 1 613 23 33 0 0 chr2L 3709778 3709808 -19301736 + AT_rich Low_complexity Low_complexity 1 30 0 1 613 24 32 0 0 chr2L 3711794 3711825 -19299719 + AT_rich Low_complexity Low_complexity 1 31 0 1 613 24 0 0 0 chr2L 3712172 3712196 -19299348 + AT_rich Low_complexity Low_complexity 1 24 0 1 613 22 56 0 0 chr2L 3717940 3717976 -19293568 + AT_rich Low_complexity Low_complexity 1 36 0 1 613 25 0 0 0 chr2L 3719945 3719970 -19291574 + AT_rich Low_complexity Low_complexity 1 25 0 1 613 27 0 0 0 chr2L 3720538 3720565 -19290979 + AT_rich Low_complexity Low_complexity 1 27 0 1 613 24 0 0 0 chr2L 3722306 3722330 -19289214 + AT_rich Low_complexity Low_complexity 1 24 0 1 613 221 192 19 0 chr2L 3724944 3724996 -19286548 + (CAA)n Simple_repeat Simple_repeat 1 53 0 1 613 213 238 16 0 chr2L 3725745 3725808 -19285736 + A-rich Low_complexity Low_complexity 2 65 0 1 613 21 0 0 0 chr2L 3726392 3726413 -19285131 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 221 219 0 0 chr2L 3726510 3726551 -19284993 + CT-rich Low_complexity Low_complexity 2 42 0 1 613 232 178 0 0 chr2L 3729094 3729139 -19282405 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 613 31 26 0 0 chr2L 3729237 3729275 -19282269 + AT_rich Low_complexity Low_complexity 1 38 0 1 613 24 0 0 0 chr2L 3736022 3736046 -19275498 + AT_rich Low_complexity Low_complexity 1 24 0 1 613 26 64 0 0 chr2L 3736089 3736136 -19275408 + AT_rich Low_complexity Low_complexity 1 47 0 1 613 33 80 0 0 chr2L 3737132 3737207 -19274337 + AT_rich Low_complexity Low_complexity 1 75 0 1 613 264 30 0 0 chr2L 3737486 3737519 -19274025 + (TTG)n Simple_repeat Simple_repeat 2 34 0 1 613 25 0 0 0 chr2L 3738465 3738490 -19273054 + AT_rich Low_complexity Low_complexity 1 25 0 1 613 243 103 0 0 chr2L 3738892 3738931 -19272613 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 613 23 0 0 0 chr2L 3741859 3741882 -19269662 + AT_rich Low_complexity Low_complexity 1 23 0 1 613 21 36 0 0 chr2L 3747519 3747547 -19263997 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 36 23 0 0 chr2L 3748177 3748220 -19263324 + AT_rich Low_complexity Low_complexity 1 43 0 1 613 22 0 0 73 chr2L 3749653 3749694 -19261850 + AT_rich Low_complexity Low_complexity 1 38 0 1 613 225 65 0 0 chr2L 3750390 3750421 -19261123 + (CAG)n Simple_repeat Simple_repeat 3 33 0 1 613 261 83 0 0 chr2L 3750627 3750663 -19260881 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 613 189 0 0 0 chr2L 3757788 3757809 -19253735 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 613 189 0 0 0 chr2L 3757817 3757838 -19253706 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 613 22 0 0 0 chr2L 3766870 3766892 -19244652 + AT_rich Low_complexity Low_complexity 1 22 0 1 613 31 0 0 0 chr2L 3768091 3768122 -19243422 + AT_rich Low_complexity Low_complexity 1 31 0 1 613 300 111 0 0 chr2L 3768514 3768559 -19242985 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 613 40 0 0 0 chr2L 3769275 3769315 -19242229 + AT_rich Low_complexity Low_complexity 1 40 0 1 613 24 0 0 0 chr2L 3769486 3769510 -19242034 + AT_rich Low_complexity Low_complexity 1 24 0 1 613 24 67 0 0 chr2L 3770033 3770078 -19241466 + AT_rich Low_complexity Low_complexity 1 45 0 1 613 28 48 0 0 chr2L 3772413 3772455 -19239089 + AT_rich Low_complexity Low_complexity 1 42 0 1 613 218 200 0 0 chr2L 3772754 3772804 -19238740 + T-rich Low_complexity Low_complexity 1 50 0 1 613 25 0 0 0 chr2L 3773304 3773329 -19238215 + AT_rich Low_complexity Low_complexity 1 25 0 1 613 21 36 0 0 chr2L 3773988 3774016 -19237528 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 21 0 0 0 chr2L 3774612 3774633 -19236911 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 22 0 0 0 chr2L 3776814 3776836 -19234708 + AT_rich Low_complexity Low_complexity 1 22 0 1 613 205 167 0 27 chr2L 3779819 3779856 -19231688 + (CGG)n Simple_repeat Simple_repeat 1 36 0 1 613 22 35 0 0 chr2L 3785661 3785690 -19225854 + AT_rich Low_complexity Low_complexity 1 29 0 1 613 21 0 0 0 chr2L 3786541 3786562 -19224982 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 23 0 0 0 chr2L 3786616 3786639 -19224905 + AT_rich Low_complexity Low_complexity 1 23 0 1 613 28 48 0 0 chr2L 3786817 3786859 -19224685 + AT_rich Low_complexity Low_complexity 1 42 0 1 613 28 0 0 0 chr2L 3789504 3789532 -19222012 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 252 100 0 0 chr2L 3789726 3789766 -19221778 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 613 21 36 0 0 chr2L 3790487 3790515 -19221029 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 21 0 0 0 chr2L 3791531 3791552 -19219992 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 21 0 0 0 chr2L 3799889 3799910 -19211634 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 27 0 0 0 chr2L 3800038 3800065 -19211479 + AT_rich Low_complexity Low_complexity 1 27 0 1 614 25 0 0 0 chr2L 3802961 3802986 -19208558 + AT_rich Low_complexity Low_complexity 1 25 0 1 614 33 0 0 0 chr2L 3805457 3805490 -19206054 + AT_rich Low_complexity Low_complexity 1 33 0 1 614 228 231 0 0 chr2L 3806551 3806603 -19204941 + GA-rich Low_complexity Low_complexity 3 54 0 1 614 36 23 0 0 chr2L 3806916 3806959 -19204585 + AT_rich Low_complexity Low_complexity 1 43 0 1 614 225 0 0 0 chr2L 3818094 3818119 -19193425 + (CAG)n Simple_repeat Simple_repeat 1 25 0 1 614 35 0 0 0 chr2L 3821100 3821135 -19190409 + AT_rich Low_complexity Low_complexity 1 35 0 1 614 219 69 0 0 chr2L 3824067 3824096 -19187448 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 1 614 218 200 0 0 chr2L 3827093 3827143 -19184401 + A-rich Low_complexity Low_complexity 1 50 0 1 614 23 0 0 0 chr2L 3827889 3827912 -19183632 + AT_rich Low_complexity Low_complexity 1 23 0 1 614 21 82 0 0 chr2L 3832935 3832984 -19178560 + AT_rich Low_complexity Low_complexity 1 49 0 1 614 24 32 0 0 chr2L 3835008 3835039 -19176505 + AT_rich Low_complexity Low_complexity 1 31 0 1 614 21 36 0 0 chr2L 3839092 3839120 -19172424 + AT_rich Low_complexity Low_complexity 1 28 0 1 614 198 0 0 0 chr2L 3840189 3840211 -19171333 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 614 197 83 0 27 chr2L 3843373 3843410 -19168134 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 1 614 24 0 0 0 chr2L 3846406 3846430 -19165114 + AT_rich Low_complexity Low_complexity 1 24 0 1 614 203 204 18 36 chr2L 3846836 3846892 -19164652 + A-rich Low_complexity Low_complexity 1 55 0 1 614 204 261 0 0 chr2L 3851882 3851928 -19159616 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 614 33 56 0 0 chr2L 3854233 3854287 -19157257 + AT_rich Low_complexity Low_complexity 1 54 0 1 614 613 125 424 9 chr2L 3856414 3856615 -19154929 + DMRP1 Unknown Unknown 51 335 -11 1 614 27 0 0 0 chr2L 3861055 3861082 -19150462 + AT_rich Low_complexity Low_complexity 1 27 0 1 614 35 54 0 0 chr2L 3867464 3867520 -19144024 + AT_rich Low_complexity Low_complexity 1 56 0 1 614 677 146 112 7 chr2L 3871964 3872109 -19139435 + DNAREP1_DM LINE Penelope 431 568 -26 1 614 366 271 21 14 chr2L 3874612 3874754 -19136790 + (CGG)n Simple_repeat Simple_repeat 1 143 0 1 614 218 286 0 0 chr2L 3877473 3877536 -19134008 + (TTG)n Simple_repeat Simple_repeat 2 64 0 1 614 223 191 0 0 chr2L 3878222 3878264 -19133280 + T-rich Low_complexity Low_complexity 1 42 0 1 614 24 32 0 0 chr2L 3883084 3883115 -19128429 + AT_rich Low_complexity Low_complexity 1 31 0 1 614 186 103 0 0 chr2L 3884524 3884553 -19126991 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 1 614 201 39 0 0 chr2L 3885400 3885426 -19126118 + (A)n Simple_repeat Simple_repeat 1 26 0 1 614 22 35 0 0 chr2L 3886119 3886148 -19125396 + AT_rich Low_complexity Low_complexity 1 29 0 1 614 27 49 0 0 chr2L 3887920 3887961 -19123583 + AT_rich Low_complexity Low_complexity 1 41 0 1 614 234 0 0 0 chr2L 3888268 3888294 -19123250 + (A)n Simple_repeat Simple_repeat 1 26 0 1 614 44 35 0 0 chr2L 3893856 3893914 -19117630 + AT_rich Low_complexity Low_complexity 1 58 0 1 614 23 78 0 0 chr2L 3895173 3895224 -19116320 + AT_rich Low_complexity Low_complexity 1 51 0 1 614 246 62 0 0 chr2L 3895538 3895570 -19115974 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 614 21 36 0 0 chr2L 3896897 3896925 -19114619 + AT_rich Low_complexity Low_complexity 1 28 0 1 614 23 33 0 0 chr2L 3896983 3897013 -19114531 + AT_rich Low_complexity Low_complexity 1 30 0 1 614 38 22 0 0 chr2L 3897561 3897606 -19113938 + AT_rich Low_complexity Low_complexity 1 45 0 1 614 252 0 0 0 chr2L 3899787 3899815 -19111729 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 614 31 58 0 0 chr2L 3902360 3902412 -19109132 + AT_rich Low_complexity Low_complexity 1 52 0 1 614 22 0 0 0 chr2L 3904985 3905007 -19106537 + AT_rich Low_complexity Low_complexity 1 22 0 1 614 23 33 0 0 chr2L 3905801 3905831 -19105713 + AT_rich Low_complexity Low_complexity 1 30 0 1 614 21 36 0 0 chr2L 3906862 3906890 -19104654 + AT_rich Low_complexity Low_complexity 1 28 0 1 614 192 97 0 0 chr2L 3909695 3909726 -19101818 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 614 243 0 0 0 chr2L 3910527 3910554 -19100990 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 614 262 273 0 33 chr2L 3914740 3914831 -19096713 + (TTG)n Simple_repeat Simple_repeat 2 89 0 1 614 257 253 0 31 chr2L 3914884 3914982 -19096562 + (TGG)n Simple_repeat Simple_repeat 2 96 0 1 614 262 209 0 0 chr2L 3914893 3914960 -19096584 + (TTG)n Simple_repeat Simple_repeat 1 67 0 1 614 186 167 0 0 chr2L 3915033 3915069 -19096475 + (CTG)n Simple_repeat Simple_repeat 3 38 0 1 614 21 36 0 0 chr2L 3919820 3919848 -19091696 + AT_rich Low_complexity Low_complexity 1 28 0 1 614 26 50 0 0 chr2L 3921340 3921380 -19090164 + AT_rich Low_complexity Low_complexity 1 40 0 1 614 294 29 0 0 chr2L 3921535 3921570 -19089974 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 614 22 0 0 0 chr2L 3921607 3921629 -19089915 + AT_rich Low_complexity Low_complexity 1 22 0 1 614 22 0 0 0 chr2L 3923444 3923466 -19088078 + AT_rich Low_complexity Low_complexity 1 22 0 1 614 216 67 0 0 chr2L 3925636 3925666 -19085878 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 614 44 63 0 0 chr2L 3925915 3925994 -19085550 + AT_rich Low_complexity Low_complexity 1 79 0 1 614 25 51 0 0 chr2L 3928166 3928205 -19083339 + AT_rich Low_complexity Low_complexity 1 39 0 1 614 180 200 0 0 chr2L 3930641 3930686 -19080858 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 614 29 0 0 0 chr2L 3931388 3931417 -19080127 + AT_rich Low_complexity Low_complexity 1 29 0 1 614 28 0 0 0 chr2L 3932130 3932158 -19079386 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 21 57 0 0 chr2L 3936573 3936608 -19074936 + AT_rich Low_complexity Low_complexity 1 35 0 1 615 192 40 0 0 chr2L 3938073 3938098 -19073446 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 615 35 0 0 0 chr2L 3938233 3938268 -19073276 + AT_rich Low_complexity Low_complexity 1 35 0 1 615 23 54 0 0 chr2L 3940816 3940853 -19070691 + AT_rich Low_complexity Low_complexity 1 37 0 1 615 186 118 0 0 chr2L 3944301 3944335 -19067209 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 615 198 0 0 0 chr2L 3945305 3945327 -19066217 + (TTCTG)n Simple_repeat Simple_repeat 4 25 0 1 615 211 167 42 0 chr2L 3945607 3945655 -19065889 + T-rich Low_complexity Low_complexity 4 53 0 1 615 228 86 0 0 chr2L 3947199 3947234 -19064310 + (A)n Simple_repeat Simple_repeat 1 35 0 1 615 225 0 0 0 chr2L 3950864 3950889 -19060655 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 615 21 0 0 0 chr2L 3951270 3951291 -19060253 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 25 31 0 0 chr2L 3951315 3951347 -19060197 + AT_rich Low_complexity Low_complexity 1 32 0 1 615 23 0 0 0 chr2L 3951847 3951870 -19059674 + AT_rich Low_complexity Low_complexity 1 23 0 1 615 291 54 0 0 chr2L 3953095 3953132 -19058412 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 615 32 26 0 0 chr2L 3958265 3958304 -19053240 + AT_rich Low_complexity Low_complexity 1 39 0 1 615 25 0 0 0 chr2L 3958597 3958622 -19052922 + AT_rich Low_complexity Low_complexity 1 25 0 1 615 29 47 0 0 chr2L 3959949 3959992 -19051552 + AT_rich Low_complexity Low_complexity 1 43 0 1 615 28 71 0 0 chr2L 3961452 3961508 -19050036 + AT_rich Low_complexity Low_complexity 1 56 0 1 615 25 31 0 0 chr2L 3962171 3962203 -19049341 + AT_rich Low_complexity Low_complexity 1 32 0 1 615 22 0 0 0 chr2L 3963813 3963835 -19047709 + AT_rich Low_complexity Low_complexity 1 22 0 1 615 21 0 0 0 chr2L 3969154 3969175 -19042369 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 21 36 0 0 chr2L 3970497 3970525 -19041019 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 24 0 0 0 chr2L 3971602 3971626 -19039918 + AT_rich Low_complexity Low_complexity 1 24 0 1 615 219 69 0 0 chr2L 3974806 3974835 -19036709 + (T)n Simple_repeat Simple_repeat 1 29 0 1 615 266 230 19 48 chr2L 3975143 3975248 -19036296 + (TTG)n Simple_repeat Simple_repeat 1 102 0 1 615 26 30 0 0 chr2L 3976379 3976412 -19035132 + AT_rich Low_complexity Low_complexity 1 33 0 1 615 28 0 0 0 chr2L 3976452 3976480 -19035064 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 26 0 0 0 chr2L 3976565 3976591 -19034953 + AT_rich Low_complexity Low_complexity 1 26 0 1 615 21 57 0 0 chr2L 3977820 3977855 -19033689 + AT_rich Low_complexity Low_complexity 1 35 0 1 615 186 224 0 0 chr2L 3978455 3978504 -19033040 + (TATG)n Simple_repeat Simple_repeat 4 52 0 1 615 23 0 0 0 chr2L 3978752 3978775 -19032769 + AT_rich Low_complexity Low_complexity 1 23 0 1 615 204 135 0 0 chr2L 3981493 3981530 -19030014 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 615 192 77 0 0 chr2L 3984327 3984353 -19027191 + (T)n Simple_repeat Simple_repeat 1 26 0 1 615 243 0 0 0 chr2L 3985530 3985557 -19025987 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 615 21 0 0 0 chr2L 3991048 3991069 -19020475 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 186 103 0 0 chr2L 3991315 3991344 -19020200 + (CATTT)n Simple_repeat Simple_repeat 2 30 0 1 615 21 0 0 0 chr2L 3993443 3993464 -19018080 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 21 57 0 0 chr2L 3993574 3993609 -19017935 + AT_rich Low_complexity Low_complexity 1 35 0 1 615 28 48 0 0 chr2L 3994134 3994176 -19017368 + AT_rich Low_complexity Low_complexity 1 42 0 1 615 417 141 116 12 chr2L 3994178 3994264 -19017280 - DNAREP1_DM LINE Penelope -499 95 1 1 615 21 0 0 0 chr2L 3995415 3995436 -19016108 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 23 33 0 0 chr2L 3995490 3995520 -19016024 + AT_rich Low_complexity Low_complexity 1 30 0 1 615 211 135 36 55 chr2L 3996287 3996342 -19015202 + (TTAAA)n Simple_repeat Simple_repeat 4 57 0 1 615 38 51 0 0 chr2L 3997241 3997300 -19014244 + AT_rich Low_complexity Low_complexity 1 59 0 1 615 249 108 0 0 chr2L 3999231 3999268 -19012276 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 615 40 37 0 0 chr2L 4001646 4001700 -19009844 + AT_rich Low_complexity Low_complexity 1 54 0 1 615 22 39 0 55 chr2L 4002245 4002300 -19009244 + AT_rich Low_complexity Low_complexity 1 52 0 1 615 26 0 0 0 chr2L 4006559 4006585 -19004959 + AT_rich Low_complexity Low_complexity 1 26 0 1 615 24 0 0 0 chr2L 4008620 4008644 -19002900 + AT_rich Low_complexity Low_complexity 1 24 0 1 615 28 0 0 0 chr2L 4015365 4015393 -18996151 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 27 29 0 0 chr2L 4017657 4017691 -18993853 + AT_rich Low_complexity Low_complexity 1 34 0 1 615 231 302 0 0 chr2L 4018356 4018409 -18993135 + G-rich Low_complexity Low_complexity 56 108 0 1 615 31 0 0 0 chr2L 4018576 4018607 -18992937 + AT_rich Low_complexity Low_complexity 1 31 0 1 615 25 0 0 0 chr2L 4019311 4019336 -18992208 + AT_rich Low_complexity Low_complexity 1 25 0 1 615 26 0 0 0 chr2L 4019858 4019884 -18991660 + AT_rich Low_complexity Low_complexity 1 26 0 1 615 294 132 0 0 chr2L 4020367 4020420 -18991124 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 615 216 0 0 0 chr2L 4027526 4027550 -18983994 + (T)n Simple_repeat Simple_repeat 1 24 0 1 615 219 237 17 0 chr2L 4028358 4028417 -18983127 + CT-rich Low_complexity Low_complexity 2 61 0 1 615 22 70 0 0 chr2L 4029161 4029204 -18982340 + AT_rich Low_complexity Low_complexity 1 43 0 1 615 795 105 105 0 chr2L 4030512 4030645 -18980899 - DNAREP1_DM LINE Penelope 0 594 448 1 615 560 100 0 0 chr2L 4030668 4030748 -18980796 - DNAREP1_DM LINE Penelope -514 80 1 1 615 24 0 0 0 chr2L 4030970 4030994 -18980550 + AT_rich Low_complexity Low_complexity 1 24 0 1 615 21 71 0 0 chr2L 4031089 4031131 -18980413 + AT_rich Low_complexity Low_complexity 1 42 0 1 615 215 231 0 19 chr2L 4031896 4031949 -18979595 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 615 43 56 0 0 chr2L 4032162 4032233 -18979311 + AT_rich Low_complexity Low_complexity 1 71 0 1 615 34 24 0 0 chr2L 4034294 4034335 -18977209 + AT_rich Low_complexity Low_complexity 1 41 0 1 615 200 135 27 0 chr2L 4034833 4034870 -18976674 + T-rich Low_complexity Low_complexity 2 39 0 1 615 186 103 0 0 chr2L 4034892 4034921 -18976623 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 615 21 36 0 0 chr2L 4034958 4034986 -18976558 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 22 0 0 0 chr2L 4035960 4035982 -18975562 + AT_rich Low_complexity Low_complexity 1 22 0 1 615 30 0 0 0 chr2L 4036430 4036460 -18975084 + AT_rich Low_complexity Low_complexity 1 30 0 1 615 25 0 0 0 chr2L 4036918 4036943 -18974601 + AT_rich Low_complexity Low_complexity 1 25 0 1 615 25 0 0 0 chr2L 4037125 4037150 -18974394 + AT_rich Low_complexity Low_complexity 1 25 0 1 615 25 51 0 0 chr2L 4037847 4037886 -18973658 + AT_rich Low_complexity Low_complexity 1 39 0 1 615 222 37 0 0 chr2L 4038550 4038577 -18972967 + (CCCCCG)n Simple_repeat Simple_repeat 4 30 0 1 615 21 36 0 0 chr2L 4038910 4038938 -18972606 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 207 105 0 26 chr2L 4038965 4039004 -18972540 + (CGAAT)n Simple_repeat Simple_repeat 1 38 0 1 615 22 0 0 0 chr2L 4039051 4039073 -18972471 + AT_rich Low_complexity Low_complexity 1 22 0 1 615 21 57 0 0 chr2L 4041824 4041859 -18969685 + AT_rich Low_complexity Low_complexity 1 35 0 1 615 28 29 0 0 chr2L 4042505 4042540 -18969004 + AT_rich Low_complexity Low_complexity 1 35 0 1 615 222 231 0 0 chr2L 4043766 4043818 -18967726 + A-rich Low_complexity Low_complexity 1 52 0 1 615 21 0 0 0 chr2L 4045525 4045546 -18965998 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 22 70 0 0 chr2L 4046329 4046372 -18965172 + AT_rich Low_complexity Low_complexity 1 43 0 1 615 22 0 0 0 chr2L 4048704 4048726 -18962818 + AT_rich Low_complexity Low_complexity 1 22 0 1 615 23 33 0 0 chr2L 4049704 4049734 -18961810 + AT_rich Low_complexity Low_complexity 1 30 0 1 615 21 0 0 0 chr2L 4051707 4051728 -18959816 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 267 114 0 0 chr2L 4053819 4053863 -18957681 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1 615 219 139 0 0 chr2L 4054148 4054184 -18957360 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 615 207 239 0 29 chr2L 4056090 4056159 -18955385 + T-rich Low_complexity Low_complexity 2 68 0 1 615 21 0 0 0 chr2L 4060479 4060500 -18951044 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 621 27 0 0 chr2L 4063026 4063101 -18948443 + (TG)n Simple_repeat Simple_repeat 1 75 0 1 616 201 39 0 0 chr2L 4066093 4066119 -18945425 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1 616 23379 1 0 0 chr2L 4066119 4068854 -18942690 - DOC6_DM LINE Jockey -6 4216 1482 1 616 22 0 0 0 chr2L 4070637 4070659 -18940885 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 23 33 0 0 chr2L 4072482 4072512 -18939032 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 203 152 0 21 chr2L 4075831 4075878 -18935666 + (TTCCG)n Simple_repeat Simple_repeat 4 49 0 1 616 21 36 0 0 chr2L 4079413 4079441 -18932103 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 218 217 0 0 chr2L 4083344 4083390 -18928154 + T-rich Low_complexity Low_complexity 1 46 0 1 616 22 56 0 0 chr2L 4083629 4083665 -18927879 + AT_rich Low_complexity Low_complexity 1 36 0 1 616 230 95 0 23 chr2L 4084030 4084073 -18927471 + (CCGAA)n Simple_repeat Simple_repeat 4 45 0 1 616 225 65 0 0 chr2L 4084600 4084631 -18926913 + (A)n Simple_repeat Simple_repeat 1 31 0 1 616 225 132 0 0 chr2L 4085412 4085450 -18926094 + (A)n Simple_repeat Simple_repeat 1 38 0 1 616 212 184 0 0 chr2L 4086226 4086264 -18925280 + (ATG)n Simple_repeat Simple_repeat 2 39 0 1 616 27 0 0 0 chr2L 4089294 4089321 -18922223 + AT_rich Low_complexity Low_complexity 1 27 0 1 616 21 0 0 0 chr2L 4089481 4089502 -18922042 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 216 0 0 0 chr2L 4089866 4089890 -18921654 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 616 315 0 0 0 chr2L 4092451 4092486 -18919058 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 616 24 0 0 0 chr2L 4095324 4095348 -18916196 + AT_rich Low_complexity Low_complexity 1 24 0 1 616 210 91 0 0 chr2L 4096933 4096966 -18914578 + (TGGA)n Simple_repeat Simple_repeat 3 35 0 1 616 251 210 16 0 chr2L 4100343 4100405 -18911139 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 1 616 22 35 0 0 chr2L 4100519 4100548 -18910996 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 200 250 18 0 chr2L 4103351 4103407 -18908137 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 616 226 330 0 0 chr2L 4103546 4103643 -18907901 + A-rich Low_complexity Low_complexity 1 97 0 1 616 234 0 0 0 chr2L 4103820 4103846 -18907698 + (CAGTT)n Simple_repeat Simple_repeat 3 28 0 1 616 21 0 0 0 chr2L 4103978 4103999 -18907545 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 201 196 0 0 chr2L 4104273 4104324 -18907220 + (CCAA)n Simple_repeat Simple_repeat 3 53 0 1 616 21 0 0 0 chr2L 4104411 4104432 -18907112 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 24 0 0 0 chr2L 4105198 4105222 -18906322 + AT_rich Low_complexity Low_complexity 1 24 0 1 616 27 0 0 0 chr2L 4106470 4106497 -18905047 + AT_rich Low_complexity Low_complexity 1 27 0 1 616 25 0 0 0 chr2L 4107143 4107168 -18904376 + AT_rich Low_complexity Low_complexity 1 25 0 1 616 25 0 0 0 chr2L 4109048 4109073 -18902471 + AT_rich Low_complexity Low_complexity 1 25 0 1 616 207 69 0 0 chr2L 4109073 4109102 -18902442 + (CCGAA)n Simple_repeat Simple_repeat 2 30 0 1 616 180 135 0 0 chr2L 4109208 4109245 -18902299 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 616 202 118 0 29 chr2L 4109380 4109415 -18902129 + (TTG)n Simple_repeat Simple_repeat 1 34 0 1 616 291 28 0 0 chr2L 4110012 4110048 -18901496 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 616 24 67 0 0 chr2L 4114592 4114637 -18896907 + AT_rich Low_complexity Low_complexity 1 45 0 1 616 219 125 0 0 chr2L 4115238 4115278 -18896266 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 1 616 24 77 0 0 chr2L 4115388 4115440 -18896104 + AT_rich Low_complexity Low_complexity 1 52 0 1 616 195 42 0 0 chr2L 4116693 4116717 -18894827 + (CACAC)n Simple_repeat Simple_repeat 3 26 0 1 616 180 0 0 0 chr2L 4116746 4116766 -18894778 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 1 616 21 0 0 0 chr2L 4120150 4120171 -18891373 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 24 53 0 0 chr2L 4121546 4121584 -18889960 + AT_rich Low_complexity Low_complexity 1 38 0 1 616 283 253 4 4 chr2L 4123181 4123445 -18888099 + (CAA)n Simple_repeat Simple_repeat 1 264 0 1 616 32 0 0 0 chr2L 4125190 4125222 -18886322 + AT_rich Low_complexity Low_complexity 1 32 0 1 616 183 42 0 0 chr2L 4125932 4125956 -18885588 + (T)n Simple_repeat Simple_repeat 1 24 0 1 616 21 36 0 0 chr2L 4126997 4127025 -18884519 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 200 111 28 0 chr2L 4129881 4129917 -18881627 + (TAG)n Simple_repeat Simple_repeat 1 37 0 1 616 23 0 0 0 chr2L 4130977 4131000 -18880544 + AT_rich Low_complexity Low_complexity 1 23 0 1 616 23 0 0 0 chr2L 4134176 4134199 -18877345 + AT_rich Low_complexity Low_complexity 1 23 0 1 616 21 82 0 0 chr2L 4136087 4136136 -18875408 + AT_rich Low_complexity Low_complexity 1 49 0 1 616 22 35 0 0 chr2L 4136746 4136775 -18874769 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 189 0 0 0 chr2L 4137005 4137026 -18874518 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 616 317 117 0 16 chr2L 4145286 4145347 -18866197 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 616 22 0 0 0 chr2L 4152402 4152424 -18859120 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 204 179 0 25 chr2L 4155018 4155058 -18856486 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 616 26 0 0 0 chr2L 4155863 4155889 -18855655 + AT_rich Low_complexity Low_complexity 1 26 0 1 616 263 289 8 34 chr2L 4156214 4156332 -18855212 + (TTG)n Simple_repeat Simple_repeat 1 115 0 1 616 207 246 0 0 chr2L 4156827 4156884 -18854660 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 616 25 31 0 0 chr2L 4157003 4157035 -18854509 + AT_rich Low_complexity Low_complexity 1 32 0 1 616 22 0 0 0 chr2L 4160274 4160296 -18851248 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 195 42 0 0 chr2L 4162028 4162052 -18849492 + (CAA)n Simple_repeat Simple_repeat 3 26 0 1 616 37 39 0 0 chr2L 4162176 4162227 -18849317 + AT_rich Low_complexity Low_complexity 1 51 0 1 616 249 196 0 0 chr2L 4172865 4172916 -18838628 + (CCCA)n Simple_repeat Simple_repeat 2 52 0 1 616 246 62 0 0 chr2L 4173620 4173652 -18837892 + (CGGA)n Simple_repeat Simple_repeat 2 33 0 1 616 216 122 0 0 chr2L 4176104 4176145 -18835399 + (A)n Simple_repeat Simple_repeat 1 41 0 1 616 30 0 0 0 chr2L 4177204 4177234 -18834310 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 23 33 0 0 chr2L 4180636 4180666 -18830878 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 257 157 58 19 chr2L 4181239 4181291 -18830253 + FB4_DM DNA Tc1 1 54 -4035 1 616 2465 7 0 4 chr2L 4181326 4181602 -18829942 - BURDOCK_LTR LTR Gypsy 0 275 1 1 616 11092 0 1 2 chr2L 4181603 4182814 -18828730 - BURDOCK_I LTR Gypsy 0 5860 4651 1 616 7230 12 0 0 chr2L 4182813 4183625 -18827919 - BURDOCK_I LTR Gypsy -5048 812 1 1 616 2465 7 0 4 chr2L 4183625 4183901 -18827643 - BURDOCK_LTR LTR Gypsy 0 275 1 1 616 282 56 0 0 chr2L 4184347 4184383 -18827161 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 616 33 0 0 0 chr2L 4184535 4184568 -18826976 + AT_rich Low_complexity Low_complexity 1 33 0 1 616 21 0 0 0 chr2L 4185026 4185047 -18826497 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 22 35 0 0 chr2L 4185767 4185796 -18825748 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 207 0 0 0 chr2L 4189657 4189680 -18821864 + (TAG)n Simple_repeat Simple_repeat 1 23 0 1 616 25 0 0 0 chr2L 4192082 4192107 -18819437 + AT_rich Low_complexity Low_complexity 1 25 0 1 616 244 261 14 0 chr2L 4192209 4192278 -18819266 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 616 219 246 0 0 chr2L 4192682 4192739 -18818805 + (TTG)n Simple_repeat Simple_repeat 3 59 0 1 617 32 26 0 0 chr2L 4197013 4197052 -18814492 + AT_rich Low_complexity Low_complexity 1 39 0 1 617 252 100 0 0 chr2L 4197423 4197463 -18814081 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 617 198 71 0 0 chr2L 4197690 4197718 -18813826 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 617 180 0 0 0 chr2L 4200161 4200181 -18811363 + (CTG)n Simple_repeat Simple_repeat 1 20 0 1 617 228 143 0 0 chr2L 4219232 4219274 -18792270 + (CGAAT)n Simple_repeat Simple_repeat 5 46 0 1 617 240 86 0 0 chr2L 4221298 4221333 -18790211 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 617 204 40 0 0 chr2L 4222024 4222049 -18789495 + (CAGTC)n Simple_repeat Simple_repeat 3 27 0 1 617 246 176 0 0 chr2L 4222738 4222789 -18788755 + (TTG)n Simple_repeat Simple_repeat 1 51 0 1 617 215 0 67 0 chr2L 4227176 4227206 -18784338 + (CTTA)n Simple_repeat Simple_repeat 1 32 0 1 617 26 50 0 0 chr2L 4227297 4227337 -18784207 + AT_rich Low_complexity Low_complexity 1 40 0 1 617 21 0 0 0 chr2L 4227759 4227780 -18783764 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 192 125 0 0 chr2L 4230312 4230344 -18781200 + (AGATG)n Simple_repeat Simple_repeat 3 34 0 1 617 192 135 0 0 chr2L 4237488 4237525 -18774019 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 617 180 0 0 0 chr2L 4238408 4238428 -18773116 + (CATCG)n Simple_repeat Simple_repeat 1 20 0 1 617 29 0 0 0 chr2L 4240315 4240344 -18771200 + AT_rich Low_complexity Low_complexity 1 29 0 1 617 189 0 0 0 chr2L 4243637 4243658 -18767886 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 617 246 136 0 0 chr2L 4244507 4244551 -18766993 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 617 21 0 0 0 chr2L 4244877 4244898 -18766646 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 312 70 0 0 chr2L 4246056 4246099 -18765445 + (CCA)n Simple_repeat Simple_repeat 2 44 0 1 617 234 62 0 0 chr2L 4248964 4248996 -18762548 + (CAG)n Simple_repeat Simple_repeat 2 33 0 1 617 228 220 0 33 chr2L 4249632 4249693 -18761851 + (ACTG)n Simple_repeat Simple_repeat 4 62 0 1 617 25 90 0 0 chr2L 4250880 4250947 -18760597 + AT_rich Low_complexity Low_complexity 1 67 0 1 617 228 200 0 0 chr2L 4251254 4251314 -18760230 + (CGA)n Simple_repeat Simple_repeat 3 62 0 1 617 198 0 0 0 chr2L 4253382 4253404 -18758140 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 617 227 305 0 17 chr2L 4255790 4255850 -18755694 + (TCG)n Simple_repeat Simple_repeat 2 60 0 1 617 198 0 0 0 chr2L 4257087 4257109 -18754435 + (CCAA)n Simple_repeat Simple_repeat 4 25 0 1 617 22 0 0 0 chr2L 4261773 4261795 -18749749 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 345 109 0 0 chr2L 4269354 4269409 -18742135 + (GCTG)n Simple_repeat Simple_repeat 2 56 0 1 617 216 67 0 0 chr2L 4269542 4269572 -18741972 + (CTG)n Simple_repeat Simple_repeat 3 32 0 1 617 180 125 0 0 chr2L 4274731 4274763 -18736781 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 617 22 0 0 0 chr2L 4279421 4279443 -18732101 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 212 111 22 0 chr2L 4280558 4280603 -18730941 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 617 180 0 0 0 chr2L 4281802 4281822 -18729722 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 617 206 118 0 0 chr2L 4283054 4283088 -18728456 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 617 180 77 0 0 chr2L 4283290 4283316 -18728228 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 617 183 184 0 0 chr2L 4283470 4283508 -18728036 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 617 28 0 0 0 chr2L 4283908 4283936 -18727608 + AT_rich Low_complexity Low_complexity 1 28 0 1 617 198 171 0 0 chr2L 4287832 4287873 -18723671 + (CGAGT)n Simple_repeat Simple_repeat 5 45 0 1 617 219 36 0 0 chr2L 4292924 4292952 -18718592 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 617 198 150 0 0 chr2L 4293645 4293685 -18717859 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 617 207 173 0 0 chr2L 4297329 4297381 -18714163 + (TGAG)n Simple_repeat Simple_repeat 3 54 0 1 617 238 206 16 0 chr2L 4298780 4298843 -18712701 + (GCATG)n Simple_repeat Simple_repeat 3 66 0 1 617 294 87 0 0 chr2L 4301567 4301613 -18709931 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 617 243 61 0 0 chr2L 4302456 4302489 -18709055 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 617 21 0 0 0 chr2L 4309906 4309927 -18701617 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 189 0 0 0 chr2L 4310380 4310401 -18701143 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 617 239 258 0 0 chr2L 4310799 4310861 -18700683 + A-rich Low_complexity Low_complexity 3 64 0 1 617 252 86 0 0 chr2L 4312671 4312706 -18698838 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 617 202 270 16 16 chr2L 4315850 4315914 -18695630 + (CCGAA)n Simple_repeat Simple_repeat 4 67 0 1 617 379 78 15 15 chr2L 4316862 4316927 -18694617 + (CCAA)n Simple_repeat Simple_repeat 4 68 0 1 617 234 105 0 0 chr2L 4317036 4317074 -18694470 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 617 202 217 0 0 chr2L 4321937 4321983 -18689561 + A-rich Low_complexity Low_complexity 1 46 0 1 617 180 77 0 0 chr2L 4323347 4323373 -18688171 + (A)n Simple_repeat Simple_repeat 1 26 0 1 617 206 95 62 16 chr2L 4323691 4323755 -18687789 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 1 618 342 0 0 0 chr2L 4327154 4327192 -18684352 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 618 28 0 0 0 chr2L 4327877 4327905 -18683639 + AT_rich Low_complexity Low_complexity 1 28 0 1 618 270 215 0 37 chr2L 4336099 4336181 -18675363 + (TCTCTG)n Simple_repeat Simple_repeat 1 79 0 1 618 21 0 0 0 chr2L 4340212 4340233 -18671311 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 213 75 0 86 chr2L 4340482 4340540 -18671004 + (CAAAG)n Simple_repeat Simple_repeat 1 53 0 1 618 180 0 0 0 chr2L 4344692 4344712 -18666832 + (CATCG)n Simple_repeat Simple_repeat 4 23 0 1 618 31 26 0 0 chr2L 4346066 4346104 -18665440 + AT_rich Low_complexity Low_complexity 1 38 0 1 618 21 0 0 0 chr2L 4346239 4346260 -18665284 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 41 0 0 0 chr2L 4346279 4346320 -18665224 + AT_rich Low_complexity Low_complexity 1 41 0 1 618 195 139 0 0 chr2L 4347225 4347261 -18664283 + (T)n Simple_repeat Simple_repeat 1 36 0 1 618 23 33 0 0 chr2L 4348659 4348689 -18662855 + AT_rich Low_complexity Low_complexity 1 30 0 1 618 22 0 0 0 chr2L 4349457 4349479 -18662065 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 24 0 0 0 chr2L 4350542 4350566 -18660978 + AT_rich Low_complexity Low_complexity 1 24 0 1 618 347 41 0 20 chr2L 4359542 4359592 -18651952 + (CTATA)n Simple_repeat Simple_repeat 2 50 0 1 618 226 159 0 22 chr2L 4363100 4363145 -18648399 - DM412 LTR Gypsy -1941 4956 4913 1 618 23 54 0 0 chr2L 4369692 4369729 -18641815 + AT_rich Low_complexity Low_complexity 1 37 0 1 618 24 32 0 0 chr2L 4373853 4373884 -18637660 + AT_rich Low_complexity Low_complexity 1 31 0 1 618 21 0 0 0 chr2L 4377713 4377734 -18633810 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 24 0 0 0 chr2L 4382942 4382966 -18628578 + AT_rich Low_complexity Low_complexity 1 24 0 1 618 22 0 0 0 chr2L 4390134 4390156 -18621388 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 211 189 0 0 chr2L 4402401 4402438 -18609106 + G-rich Low_complexity Low_complexity 5 41 0 1 618 362 196 0 9 chr2L 4402713 4402821 -18608723 + (CCA)n Simple_repeat Simple_repeat 1 107 0 1 618 186 133 0 0 chr2L 4409050 4409080 -18602464 + (CTG)n Simple_repeat Simple_repeat 2 31 0 1 618 22 0 0 0 chr2L 4411800 4411822 -18599722 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 208 139 0 0 chr2L 4417370 4417406 -18594138 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 618 25 0 0 0 chr2L 4418852 4418877 -18592667 + AT_rich Low_complexity Low_complexity 1 25 0 1 618 183 100 0 0 chr2L 4420133 4420163 -18591381 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 618 201 121 0 0 chr2L 4420550 4420583 -18590961 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 618 217 250 16 0 chr2L 4421751 4421815 -18589729 + (TTG)n Simple_repeat Simple_repeat 2 66 0 1 618 201 108 0 0 chr2L 4423730 4423767 -18587777 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 618 23 68 0 0 chr2L 4424696 4424740 -18586804 + AT_rich Low_complexity Low_complexity 1 44 0 1 618 21 0 0 0 chr2L 4424777 4424798 -18586746 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 180 0 0 0 chr2L 4425049 4425069 -18586475 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 618 27 0 0 0 chr2L 4428017 4428044 -18583500 + AT_rich Low_complexity Low_complexity 1 27 0 1 618 23 54 0 0 chr2L 4429713 4429750 -18581794 + AT_rich Low_complexity Low_complexity 1 37 0 1 618 186 150 0 0 chr2L 4430097 4430137 -18581407 + (TTGG)n Simple_repeat Simple_repeat 3 42 0 1 618 270 0 0 0 chr2L 4431860 4431890 -18579654 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 618 37 23 0 0 chr2L 4432379 4432423 -18579121 + AT_rich Low_complexity Low_complexity 1 44 0 1 618 183 42 0 0 chr2L 4433692 4433716 -18577828 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 618 29 0 0 0 chr2L 4434806 4434835 -18576709 + AT_rich Low_complexity Low_complexity 1 29 0 1 618 31 44 0 0 chr2L 4435761 4435806 -18575738 + AT_rich Low_complexity Low_complexity 1 45 0 1 618 210 37 0 0 chr2L 4440615 4440642 -18570902 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 618 234 269 0 0 chr2L 4440763 4440830 -18570714 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 618 22 99 0 0 chr2L 4440938 4441009 -18570535 + AT_rich Low_complexity Low_complexity 1 71 0 1 618 180 182 0 0 chr2L 4442561 4442605 -18568939 + GA-rich Low_complexity Low_complexity 3 46 0 1 618 24 53 0 0 chr2L 4449307 4449345 -18562199 + AT_rich Low_complexity Low_complexity 1 38 0 1 618 21 71 0 0 chr2L 4450427 4450469 -18561075 + AT_rich Low_complexity Low_complexity 1 42 0 1 618 180 0 0 0 chr2L 4453458 4453478 -18558066 + (CTG)n Simple_repeat Simple_repeat 2 21 0 1 619 28 0 0 0 chr2L 4461647 4461675 -18549869 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 28 0 0 0 chr2L 4467020 4467048 -18544496 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 26 30 0 0 chr2L 4467977 4468010 -18543534 + AT_rich Low_complexity Low_complexity 1 33 0 1 619 28 0 0 0 chr2L 4471193 4471221 -18540323 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 21 36 0 0 chr2L 4471864 4471892 -18539652 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 225 65 0 0 chr2L 4477462 4477493 -18534051 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1 619 31 44 0 0 chr2L 4478027 4478072 -18533472 + AT_rich Low_complexity Low_complexity 1 45 0 1 619 189 0 0 0 chr2L 4478651 4478672 -18532872 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 619 23 0 0 0 chr2L 4518679 4518702 -18492842 + AT_rich Low_complexity Low_complexity 1 23 0 1 619 28 0 0 0 chr2L 4526550 4526578 -18484966 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 218 246 0 0 chr2L 4531792 4531849 -18479695 + (TGG)n Simple_repeat Simple_repeat 3 59 0 1 619 27 0 0 0 chr2L 4551061 4551088 -18460456 + AT_rich Low_complexity Low_complexity 1 27 0 1 619 27 0 0 0 chr2L 4562572 4562599 -18448945 + AT_rich Low_complexity Low_complexity 1 27 0 1 619 219 36 0 0 chr2L 4572549 4572577 -18438967 + (CACTT)n Simple_repeat Simple_repeat 1 28 0 1 619 195 42 0 0 chr2L 4572801 4572825 -18438719 + (ATG)n Simple_repeat Simple_repeat 1 24 0 1 619 211 273 0 0 chr2L 4585044 4585088 -18426456 + (TTGGGG)n Simple_repeat Simple_repeat 5 48 0 1 619 207 0 0 0 chr2L 4585611 4585634 -18425910 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 620 29 28 0 0 chr2L 4591430 4591466 -18420078 + AT_rich Low_complexity Low_complexity 1 36 0 1 620 22 80 0 0 chr2L 4596850 4596900 -18414644 + AT_rich Low_complexity Low_complexity 1 50 0 1 620 186 143 0 0 chr2L 4597603 4597638 -18413906 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 620 21 57 0 0 chr2L 4599075 4599110 -18412434 + AT_rich Low_complexity Low_complexity 1 35 0 1 620 3823 18 0 0 chr2L 4601758 4602200 -18409344 - MDG1_LTR LTR Gypsy 0 442 1 1 620 57074 7 17 2 chr2L 4602200 4608700 -18402844 - MDG1_I LTR Gypsy 0 6596 1 1 620 3823 18 0 0 chr2L 4608700 4609142 -18402402 - MDG1_LTR LTR Gypsy 0 442 1 1 620 180 125 0 0 chr2L 4610757 4610789 -18400755 + (GAATG)n Simple_repeat Simple_repeat 2 33 0 1 620 23 0 0 0 chr2L 4611175 4611198 -18400346 + AT_rich Low_complexity Low_complexity 1 23 0 1 620 219 236 18 0 chr2L 4613121 4613176 -18398368 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 620 30 0 0 0 chr2L 4614797 4614827 -18396717 + AT_rich Low_complexity Low_complexity 1 30 0 1 620 28 99 0 0 chr2L 4615524 4615615 -18395929 + AT_rich Low_complexity Low_complexity 1 91 0 1 620 186 71 0 0 chr2L 4616552 4616580 -18394964 + (CATCT)n Simple_repeat Simple_repeat 4 31 0 1 620 223 229 0 28 chr2L 4620531 4620603 -18390941 + T-rich Low_complexity Low_complexity 2 71 0 1 620 198 0 0 0 chr2L 4620789 4620811 -18390733 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 620 28 0 0 0 chr2L 4623815 4623843 -18387701 + AT_rich Low_complexity Low_complexity 1 28 0 1 620 28 61 0 0 chr2L 4624096 4624145 -18387399 + AT_rich Low_complexity Low_complexity 1 49 0 1 620 34 84 0 0 chr2L 4629828 4629911 -18381633 + AT_rich Low_complexity Low_complexity 1 83 0 1 620 32 26 0 0 chr2L 4630904 4630943 -18380601 + AT_rich Low_complexity Low_complexity 1 39 0 1 620 195 189 0 0 chr2L 4634484 4634537 -18377007 + (CAG)n Simple_repeat Simple_repeat 1 53 0 1 620 228 328 0 0 chr2L 4634688 4634755 -18376789 + (CAG)n Simple_repeat Simple_repeat 1 67 0 1 620 233 196 0 67 chr2L 4634920 4634980 -18376564 + (CTG)n Simple_repeat Simple_repeat 2 57 0 1 620 222 174 0 0 chr2L 4635939 4635985 -18375559 + (CTG)n Simple_repeat Simple_repeat 2 47 0 1 620 21 36 0 0 chr2L 4636882 4636910 -18374634 + AT_rich Low_complexity Low_complexity 1 28 0 1 620 21 0 0 0 chr2L 4638832 4638853 -18372691 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 219 36 0 0 chr2L 4639005 4639033 -18372511 + (CAGAC)n Simple_repeat Simple_repeat 2 29 0 1 620 263 28 28 0 chr2L 4640546 4640582 -18370962 + (CATGC)n Simple_repeat Simple_repeat 1 37 0 1 620 21 0 0 0 chr2L 4642733 4642754 -18368790 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 25 0 0 0 chr2L 4642951 4642976 -18368568 + AT_rich Low_complexity Low_complexity 1 25 0 1 620 320 287 0 0 chr2L 4643214 4643357 -18368187 + (CCA)n Simple_repeat Simple_repeat 2 144 0 1 620 1056 60 0 0 chr2L 4647607 4647756 -18363788 + (CTA)n Simple_repeat Simple_repeat 2 150 0 1 620 28 48 0 0 chr2L 4647868 4647910 -18363634 + AT_rich Low_complexity Low_complexity 1 42 0 1 620 22 0 0 0 chr2L 4650166 4650188 -18361356 + AT_rich Low_complexity Low_complexity 1 22 0 1 620 236 77 0 25 chr2L 4651258 4651298 -18360246 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 1 620 24 0 0 0 chr2L 4654439 4654463 -18357081 + AT_rich Low_complexity Low_complexity 1 24 0 1 620 213 65 0 0 chr2L 4656028 4656059 -18355485 + (CTG)n Simple_repeat Simple_repeat 1 31 0 1 620 209 222 0 0 chr2L 4658690 4658735 -18352809 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 1 620 4806 4 0 0 chr2L 4661879 4662397 -18349147 - NOMAD_LTR LTR Gypsy 0 518 1 1 620 52523 0 14 1 chr2L 4662397 4668884 -18342660 - NOMAD_I LTR Gypsy 0 6572 1 1 620 4806 7 0 0 chr2L 4668884 4669422 -18342122 - NOMAD_LTR LTR Gypsy 0 518 1 1 620 21 0 0 0 chr2L 4679922 4679943 -18331601 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 31 0 0 0 chr2L 4682569 4682600 -18328944 + AT_rich Low_complexity Low_complexity 1 31 0 1 620 26 64 0 0 chr2L 4687195 4687242 -18324302 + AT_rich Low_complexity Low_complexity 1 47 0 1 620 24 85 0 0 chr2L 4689007 4689066 -18322478 + AT_rich Low_complexity Low_complexity 1 59 0 1 620 205 205 0 0 chr2L 4692148 4692187 -18319357 + A-rich Low_complexity Low_complexity 2 40 0 1 620 32 81 0 0 chr2L 4693441 4693515 -18318029 + AT_rich Low_complexity Low_complexity 1 74 0 1 620 21 0 0 0 chr2L 4695837 4695858 -18315686 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 207 203 0 0 chr2L 4696311 4696370 -18315174 + (CAT)n Simple_repeat Simple_repeat 3 61 0 1 620 195 42 0 0 chr2L 4696437 4696461 -18315083 + (TGAG)n Simple_repeat Simple_repeat 3 26 0 1 620 24 32 0 0 chr2L 4699163 4699194 -18312350 + AT_rich Low_complexity Low_complexity 1 31 0 1 620 1519 268 45 28 chr2L 4700245 4700929 -18310615 + SAR_DM Satellite Satellite 1 695 -165 1 620 237 172 45 22 chr2L 4705647 4705736 -18305808 + ROO_I LTR Pao 644 734 -7522 1 620 21 0 0 0 chr2L 4705901 4705922 -18305622 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 25 0 0 0 chr2L 4706858 4706883 -18304661 + AT_rich Low_complexity Low_complexity 1 25 0 1 620 22 0 0 0 chr2L 4708518 4708540 -18303004 + AT_rich Low_complexity Low_complexity 1 22 0 1 620 234 0 0 0 chr2L 4715152 4715178 -18296366 + (GCTG)n Simple_repeat Simple_repeat 3 28 0 1 621 216 122 0 0 chr2L 4723315 4723356 -18288188 + (CTCA)n Simple_repeat Simple_repeat 2 42 0 1 621 21 36 0 0 chr2L 4727091 4727119 -18284425 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 180 111 0 0 chr2L 4728415 4728442 -18283102 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 621 21 82 0 0 chr2L 4728764 4728813 -18282731 + AT_rich Low_complexity Low_complexity 1 49 0 1 621 22 0 0 0 chr2L 4734255 4734277 -18277267 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 282 56 0 0 chr2L 4737501 4737537 -18274007 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 621 194 208 0 19 chr2L 4740587 4740641 -18270903 + A-rich Low_complexity Low_complexity 2 54 0 1 621 23 0 0 0 chr2L 4742918 4742941 -18268603 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 21 0 0 0 chr2L 4746657 4746678 -18264866 + AT_rich Low_complexity Low_complexity 1 21 0 1 621 23 0 0 0 chr2L 4747936 4747959 -18263585 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 219 244 0 0 chr2L 4749090 4749135 -18262409 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 621 246 81 0 0 chr2L 4756443 4756480 -18255064 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 621 189 180 0 0 chr2L 4757436 4757486 -18254058 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 621 189 0 0 0 chr2L 4759461 4759482 -18252062 + (TGG)n Simple_repeat Simple_repeat 3 23 0 1 621 183 100 0 0 chr2L 4762321 4762351 -18249193 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 621 204 40 0 0 chr2L 4764461 4764486 -18247058 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 621 180 77 0 0 chr2L 4765190 4765216 -18246328 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 621 213 108 0 0 chr2L 4765716 4765753 -18245791 + (TCCTG)n Simple_repeat Simple_repeat 5 41 0 1 621 214 171 0 0 chr2L 4766905 4766946 -18244598 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 621 201 239 0 0 chr2L 4767359 4767405 -18244139 + CT-rich Low_complexity Low_complexity 1 46 0 1 621 27 29 0 0 chr2L 4767969 4768003 -18243541 + AT_rich Low_complexity Low_complexity 1 34 0 1 621 25 0 0 0 chr2L 4773269 4773294 -18238250 + AT_rich Low_complexity Low_complexity 1 25 0 1 621 274 176 59 0 chr2L 4773709 4773777 -18237767 + ROO_I LTR Pao 667 738 -7518 1 621 227 196 0 21 chr2L 4779301 4779348 -18232196 + (ACTG)n Simple_repeat Simple_repeat 2 47 0 1 621 21 36 0 0 chr2L 4779419 4779447 -18232097 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 192 77 0 0 chr2L 4780785 4780811 -18230733 + (CAACT)n Simple_repeat Simple_repeat 5 30 0 1 621 192 125 0 0 chr2L 4784020 4784052 -18227492 + (CGAA)n Simple_repeat Simple_repeat 3 34 0 1 621 31 26 0 0 chr2L 4785496 4785534 -18226010 + AT_rich Low_complexity Low_complexity 1 38 0 1 621 241 156 0 135 chr2L 4785695 4785747 -18225797 - G2_DM LINE Jockey -1571 1531 1487 1 621 30 83 0 0 chr2L 4786776 4786848 -18224696 + AT_rich Low_complexity Low_complexity 1 72 0 1 621 261 83 0 0 chr2L 4788228 4788264 -18223280 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 621 231 36 0 0 chr2L 4790236 4790264 -18221280 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 621 234 0 0 0 chr2L 4790543 4790569 -18220975 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 621 21 0 0 0 chr2L 4794389 4794410 -18217134 + AT_rich Low_complexity Low_complexity 1 21 0 1 621 33 66 0 0 chr2L 4794686 4794747 -18216797 + AT_rich Low_complexity Low_complexity 1 61 0 1 621 26 30 0 0 chr2L 4795584 4795617 -18215927 + AT_rich Low_complexity Low_complexity 1 33 0 1 621 23 0 0 0 chr2L 4797725 4797748 -18213796 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 180 0 0 0 chr2L 4798373 4798393 -18213151 + (A)n Simple_repeat Simple_repeat 1 20 0 1 621 198 103 0 0 chr2L 4798673 4798702 -18212842 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 621 34 0 0 0 chr2L 4799417 4799451 -18212093 + AT_rich Low_complexity Low_complexity 1 34 0 1 621 215 241 0 0 chr2L 4800493 4800547 -18210997 + T-rich Low_complexity Low_complexity 1 54 0 1 621 21 0 0 0 chr2L 4802765 4802786 -18208758 + AT_rich Low_complexity Low_complexity 1 21 0 1 621 198 0 0 0 chr2L 4803137 4803159 -18208385 + (T)n Simple_repeat Simple_repeat 1 22 0 1 621 26 0 0 0 chr2L 4803867 4803893 -18207651 + AT_rich Low_complexity Low_complexity 1 26 0 1 621 24 32 0 0 chr2L 4804610 4804641 -18206903 + AT_rich Low_complexity Low_complexity 1 31 0 1 621 180 125 0 0 chr2L 4805604 4805636 -18205908 + (CGAAA)n Simple_repeat Simple_repeat 3 34 0 1 621 218 179 0 0 chr2L 4805787 4805826 -18205718 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 621 22 0 0 0 chr2L 4806309 4806331 -18205213 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 204 226 0 0 chr2L 4808104 4808157 -18203387 + A-rich Low_complexity Low_complexity 1 53 0 1 621 25 31 0 0 chr2L 4809072 4809104 -18202440 + AT_rich Low_complexity Low_complexity 1 32 0 1 621 23 0 0 0 chr2L 4809113 4809136 -18202408 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 24 77 0 0 chr2L 4810017 4810069 -18201475 + AT_rich Low_complexity Low_complexity 1 52 0 1 621 25 31 0 0 chr2L 4810075 4810107 -18201437 + AT_rich Low_complexity Low_complexity 1 32 0 1 621 251 246 0 0 chr2L 4810824 4810881 -18200663 + C-rich Low_complexity Low_complexity 1 57 0 1 621 270 143 0 0 chr2L 4811824 4811873 -18199671 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 621 226 231 0 0 chr2L 4820540 4820592 -18190952 + GA-rich Low_complexity Low_complexity 1 52 0 1 621 26 50 0 0 chr2L 4821423 4821463 -18190081 + AT_rich Low_complexity Low_complexity 1 40 0 1 621 222 150 0 0 chr2L 4821697 4821737 -18189807 + (CTG)n Simple_repeat Simple_repeat 3 42 0 1 621 243 146 34 68 chr2L 4821872 4821960 -18189584 + ROO_I LTR Pao 649 733 -7523 1 621 186 150 0 0 chr2L 4822066 4822106 -18189438 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 621 35 0 0 0 chr2L 4823010 4823045 -18188499 + AT_rich Low_complexity Low_complexity 1 35 0 1 621 28 0 0 0 chr2L 4826395 4826423 -18185121 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 21 36 0 0 chr2L 4828103 4828131 -18183413 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 22 35 0 0 chr2L 4835340 4835369 -18176175 + AT_rich Low_complexity Low_complexity 1 29 0 1 621 311 302 0 0 chr2L 4836032 4836148 -18175396 + (CTG)n Simple_repeat Simple_repeat 3 118 0 1 621 21 0 0 0 chr2L 4841546 4841567 -18169977 + AT_rich Low_complexity Low_complexity 1 21 0 1 621 258 56 0 0 chr2L 4843026 4843062 -18168482 + (TTAAA)n Simple_repeat Simple_repeat 3 38 0 1 621 203 175 0 17 chr2L 4844333 4844391 -18167153 + (CTG)n Simple_repeat Simple_repeat 3 59 0 1 621 205 316 0 0 chr2L 4845397 4845473 -18166071 + (CGG)n Simple_repeat Simple_repeat 1 76 0 1 621 186 133 0 0 chr2L 4846726 4846756 -18164788 + (CAG)n Simple_repeat Simple_repeat 3 32 0 1 621 25 31 0 0 chr2L 4847402 4847434 -18164110 + AT_rich Low_complexity Low_complexity 1 32 0 1 621 267 152 0 0 chr2L 4848021 4848067 -18163477 + (CAA)n Simple_repeat Simple_repeat 1 46 0 1 622 27 0 0 0 chr2L 4850491 4850518 -18161026 + AT_rich Low_complexity Low_complexity 1 27 0 1 622 330 98 0 0 chr2L 4853278 4853329 -18158215 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 622 297 145 0 0 chr2L 4853579 4853641 -18157903 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 622 278 167 0 16 chr2L 4856947 4857008 -18154536 + (TATG)n Simple_repeat Simple_repeat 3 62 0 1 622 207 114 0 0 chr2L 4862185 4862220 -18149324 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 622 315 252 0 0 chr2L 4863208 4863311 -18148233 + (CAGAGA)n Simple_repeat Simple_repeat 3 105 0 1 622 227 279 15 0 chr2L 4865567 4865635 -18145909 + TART LINE telomeric 12648 12716 -1761 1 622 258 181 0 78 chr2L 4865581 4865671 -18145873 + ROO_I LTR Pao 651 733 -7523 1 622 205 167 0 0 chr2L 4866019 4866055 -18145489 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 622 31 44 0 0 chr2L 4866135 4866180 -18145364 + AT_rich Low_complexity Low_complexity 1 45 0 1 622 203 190 0 17 chr2L 4867930 4867989 -18143555 + (CTG)n Simple_repeat Simple_repeat 2 59 0 1 622 229 229 0 0 chr2L 4868045 4868093 -18143451 + T-rich Low_complexity Low_complexity 1 48 0 1 622 22 0 0 0 chr2L 4868304 4868326 -18143218 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 189 0 0 0 chr2L 4868500 4868521 -18143023 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 622 213 94 0 0 chr2L 4868659 4868691 -18142853 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 622 225 0 0 0 chr2L 4868999 4869024 -18142520 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 622 216 97 0 0 chr2L 4874735 4874766 -18136778 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 622 212 59 29 0 chr2L 4876569 4876603 -18134941 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 622 34 24 0 0 chr2L 4877032 4877073 -18134471 + AT_rich Low_complexity Low_complexity 1 41 0 1 622 180 0 0 0 chr2L 4877917 4877937 -18133607 + (TTTAG)n Simple_repeat Simple_repeat 2 21 0 1 622 21 0 0 0 chr2L 4877961 4877982 -18133562 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 23 0 0 0 chr2L 4878222 4878245 -18133299 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 191 140 20 0 chr2L 4878391 4878441 -18133103 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 622 195 42 0 0 chr2L 4879300 4879324 -18132220 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1 622 22 35 0 0 chr2L 4879390 4879419 -18132125 + AT_rich Low_complexity Low_complexity 1 29 0 1 622 252 151 0 64 chr2L 4880195 4880273 -18131271 + (ATTG)n Simple_repeat Simple_repeat 2 74 0 1 622 198 0 0 0 chr2L 4880572 4880594 -18130950 + (GA)n Simple_repeat Simple_repeat 2 23 0 1 622 189 0 0 0 chr2L 4880752 4880773 -18130771 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 622 218 250 0 0 chr2L 4881558 4881626 -18129918 + (CTG)n Simple_repeat Simple_repeat 2 69 0 1 622 261 188 0 34 chr2L 4881637 4881725 -18129819 - ROO_I LTR Pao -7524 732 648 1 622 239 226 0 16 chr2L 4882273 4882336 -18129208 + (CGG)n Simple_repeat Simple_repeat 3 64 0 1 622 183 139 0 0 chr2L 4882550 4882586 -18128958 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 622 231 146 0 0 chr2L 4882702 4882743 -18128801 + (GAA)n Simple_repeat Simple_repeat 1 41 0 1 622 200 259 19 0 chr2L 4886692 4886746 -18124798 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 622 243 88 0 0 chr2L 4889470 4889504 -18122040 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1 622 328 204 0 64 chr2L 4891814 4891924 -18119620 + ROO_I LTR Pao 644 746 -7510 1 622 372 233 0 46 chr2L 4891942 4892050 -18119494 + ROO_I LTR Pao 638 740 -7516 1 622 222 170 18 36 chr2L 4892142 4892197 -18119347 + (CAG)n Simple_repeat Simple_repeat 2 55 0 1 622 207 254 34 0 chr2L 4899074 4899133 -18112411 + (AAATG)n Simple_repeat Simple_repeat 5 65 0 1 622 21 36 0 0 chr2L 4902938 4902966 -18108578 + AT_rich Low_complexity Low_complexity 1 28 0 1 622 23 33 0 0 chr2L 4904092 4904122 -18107422 + AT_rich Low_complexity Low_complexity 1 30 0 1 622 24 0 0 0 chr2L 4906347 4906371 -18105173 + AT_rich Low_complexity Low_complexity 1 24 0 1 622 22 0 0 0 chr2L 4907508 4907530 -18104014 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 25 51 0 0 chr2L 4908169 4908208 -18103336 + AT_rich Low_complexity Low_complexity 1 39 0 1 622 31 26 0 0 chr2L 4908833 4908871 -18102673 + AT_rich Low_complexity Low_complexity 1 38 0 2 622 22 35 0 0 chr2L 4909431 4909460 -18102084 + AT_rich Low_complexity Low_complexity 1 29 0 2 622 216 0 0 0 chr2L 4912783 4912807 -18098737 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 622 220 213 0 0 chr2L 4914035 4914082 -18097462 + A-rich Low_complexity Low_complexity 1 47 0 2 622 28 29 0 0 chr2L 4915741 4915776 -18095768 + AT_rich Low_complexity Low_complexity 1 35 0 2 622 223 152 43 0 chr2L 4917151 4917197 -18094347 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 622 46682 4 0 0 chr2L 4918232 4923234 -18088310 - LINEJ1_DM LINE Jockey -13 5007 6 2 622 24 32 0 0 chr2L 4926897 4926928 -18084616 + AT_rich Low_complexity Low_complexity 1 31 0 2 622 27 29 0 0 chr2L 4927904 4927938 -18083606 + AT_rich Low_complexity Low_complexity 1 34 0 2 622 24 0 0 0 chr2L 4935461 4935485 -18076059 + AT_rich Low_complexity Low_complexity 1 24 0 2 622 22 0 0 0 chr2L 4936049 4936071 -18075473 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 224 261 6 73 chr2L 4938688 4938866 -18072678 + (CAA)n Simple_repeat Simple_repeat 1 166 0 2 622 221 250 0 101 chr2L 4938880 4939058 -18072486 + (CAA)n Simple_repeat Simple_repeat 1 160 0 2 622 223 242 0 119 chr2L 4939191 4939393 -18072151 + (CAA)n Simple_repeat Simple_repeat 3 180 0 2 622 209 256 0 97 chr2L 4940752 4940938 -18070606 + (CAA)n Simple_repeat Simple_repeat 1 168 0 2 622 21 0 0 0 chr2L 4945093 4945114 -18066430 + AT_rich Low_complexity Low_complexity 1 21 0 2 622 24 0 0 0 chr2L 4945442 4945466 -18066078 + AT_rich Low_complexity Low_complexity 1 24 0 2 622 384 198 221 18 chr2L 4947928 4948041 -18063503 - DNAREP1_DM LINE Penelope -28 566 431 2 622 38 0 0 0 chr2L 4950957 4950995 -18060549 + AT_rich Low_complexity Low_complexity 1 38 0 2 622 22 35 0 0 chr2L 4951083 4951112 -18060432 + AT_rich Low_complexity Low_complexity 1 29 0 2 622 22 80 0 0 chr2L 4951799 4951849 -18059695 + AT_rich Low_complexity Low_complexity 1 50 0 2 622 1699 0 0 0 chr2L 4953565 4953751 -18057793 + POGON1 DNA Pogo 1 186 0 2 622 22 0 0 0 chr2L 4953815 4953837 -18057707 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 29 47 0 0 chr2L 4953891 4953934 -18057610 + AT_rich Low_complexity Low_complexity 1 43 0 2 622 947 97 0 0 chr2L 4973718 4973842 -18037702 - S2_DM DNA Tc1 -913 822 699 2 622 560 181 0 0 chr2L 4973822 4973927 -18037617 - S2_DM DNA Tc1 -1258 477 373 2 623 21 36 0 0 chr2L 4981465 4981493 -18030051 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 25 90 0 0 chr2L 4982742 4982809 -18028735 + AT_rich Low_complexity Low_complexity 1 67 0 2 623 25 65 0 0 chr2L 4989423 4989469 -18022075 + AT_rich Low_complexity Low_complexity 1 46 0 2 623 21 36 0 0 chr2L 4989490 4989518 -18022026 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 21 0 0 0 chr2L 4998982 4999003 -18012541 + AT_rich Low_complexity Low_complexity 1 21 0 2 623 21 0 0 0 chr2L 4999642 4999663 -18011881 + AT_rich Low_complexity Low_complexity 1 21 0 2 623 213 227 0 0 chr2L 5000411 5000455 -18011089 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 623 209 226 19 0 chr2L 5001227 5001280 -18010264 + (CAA)n Simple_repeat Simple_repeat 1 54 0 2 623 23 0 0 0 chr2L 5006353 5006376 -18005168 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 215 61 30 0 chr2L 5007159 5007192 -18004352 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 623 28 0 0 0 chr2L 5007916 5007944 -18003600 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 272 120 0 20 chr2L 5009472 5009523 -18002021 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 623 183 42 0 0 chr2L 5019739 5019763 -17991781 + (A)n Simple_repeat Simple_repeat 1 24 0 2 623 29 0 0 0 chr2L 5020112 5020141 -17991403 + AT_rich Low_complexity Low_complexity 1 29 0 2 623 201 74 0 0 chr2L 5020705 5020732 -17990812 + (TATG)n Simple_repeat Simple_repeat 2 28 0 2 623 180 111 0 0 chr2L 5020914 5020941 -17990603 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 623 225 94 0 0 chr2L 5023775 5023807 -17987737 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 623 27 0 0 0 chr2L 5027864 5027891 -17983653 + AT_rich Low_complexity Low_complexity 1 27 0 2 623 31 26 0 0 chr2L 5028542 5028580 -17982964 + AT_rich Low_complexity Low_complexity 1 38 0 2 623 22 0 0 0 chr2L 5030038 5030060 -17981484 + AT_rich Low_complexity Low_complexity 1 22 0 2 623 30 45 0 0 chr2L 5030364 5030408 -17981136 + AT_rich Low_complexity Low_complexity 1 44 0 2 623 21 36 0 0 chr2L 5030469 5030497 -17981047 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 194 182 15 0 chr2L 5036826 5036892 -17974652 + (CA)n Simple_repeat Simple_repeat 1 67 0 2 623 21 36 0 0 chr2L 5037250 5037278 -17974266 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 180 0 0 0 chr2L 5038069 5038089 -17973455 + (A)n Simple_repeat Simple_repeat 1 20 0 2 623 189 213 0 0 chr2L 5043668 5043715 -17967829 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 623 23 0 0 0 chr2L 5044073 5044096 -17967448 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 183 42 0 0 chr2L 5044864 5044888 -17966656 + (A)n Simple_repeat Simple_repeat 1 24 0 2 623 21 36 0 0 chr2L 5044913 5044941 -17966603 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 29 0 0 0 chr2L 5045170 5045199 -17966345 + AT_rich Low_complexity Low_complexity 1 29 0 2 623 21 0 0 0 chr2L 5050476 5050497 -17961047 + AT_rich Low_complexity Low_complexity 1 21 0 2 623 22 0 0 0 chr2L 5062105 5062127 -17949417 + AT_rich Low_complexity Low_complexity 1 22 0 2 623 22 0 0 0 chr2L 5066463 5066485 -17945059 + AT_rich Low_complexity Low_complexity 1 22 0 2 623 207 100 0 0 chr2L 5066740 5066770 -17944774 + (A)n Simple_repeat Simple_repeat 1 30 0 2 623 247 254 0 0 chr2L 5066881 5066936 -17944608 + (CAG)n Simple_repeat Simple_repeat 2 56 0 2 623 25 0 0 0 chr2L 5072186 5072211 -17939333 + AT_rich Low_complexity Low_complexity 1 25 0 2 623 22 35 0 0 chr2L 5072971 5073000 -17938544 + AT_rich Low_complexity Low_complexity 1 29 0 2 623 180 0 0 0 chr2L 5079580 5079600 -17931944 + (GA)n Simple_repeat Simple_repeat 2 21 0 2 623 195 69 0 0 chr2L 5083599 5083628 -17927916 + (A)n Simple_repeat Simple_repeat 1 29 0 2 623 201 74 0 0 chr2L 5085478 5085505 -17926039 + (CAT)n Simple_repeat Simple_repeat 1 27 0 2 623 35 63 0 0 chr2L 5085778 5085841 -17925703 + AT_rich Low_complexity Low_complexity 1 63 0 2 623 26 0 0 0 chr2L 5087581 5087607 -17923937 + AT_rich Low_complexity Low_complexity 1 26 0 2 623 27 0 0 0 chr2L 5089016 5089043 -17922501 + AT_rich Low_complexity Low_complexity 1 27 0 2 623 186 143 0 0 chr2L 5093321 5093356 -17918188 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 623 26 30 0 0 chr2L 5093749 5093782 -17917762 + AT_rich Low_complexity Low_complexity 1 33 0 2 623 31 68 0 0 chr2L 5093796 5093855 -17917689 + AT_rich Low_complexity Low_complexity 1 59 0 2 623 23 68 0 0 chr2L 5097481 5097525 -17914019 + AT_rich Low_complexity Low_complexity 1 44 0 2 623 27 29 0 0 chr2L 5100332 5100366 -17911178 + AT_rich Low_complexity Low_complexity 1 34 0 2 623 32 0 0 0 chr2L 5102601 5102633 -17908911 + AT_rich Low_complexity Low_complexity 1 32 0 2 623 39 0 0 0 chr2L 5104558 5104597 -17906947 + AT_rich Low_complexity Low_complexity 1 39 0 2 623 297 0 0 0 chr2L 5104609 5104642 -17906902 + (TATAG)n Simple_repeat Simple_repeat 3 35 0 2 623 198 71 0 0 chr2L 5108946 5108974 -17902570 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 624 222 37 0 0 chr2L 5113085 5113112 -17898432 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 2 624 189 107 0 0 chr2L 5118409 5118437 -17893107 + (A)n Simple_repeat Simple_repeat 1 28 0 2 624 22 0 0 0 chr2L 5118941 5118963 -17892581 + AT_rich Low_complexity Low_complexity 1 22 0 2 624 467 63 0 16 chr2L 5120269 5120333 -17891211 - DNAREP1_DM LINE Penelope 0 594 532 2 624 564 72 0 0 chr2L 5120330 5120399 -17891145 - DNAREP1_DM LINE Penelope -525 69 1 2 624 24 0 0 0 chr2L 5121648 5121672 -17889872 + AT_rich Low_complexity Low_complexity 1 24 0 2 624 25 0 0 0 chr2L 5125666 5125691 -17885853 + AT_rich Low_complexity Low_complexity 1 25 0 2 624 45 45 0 0 chr2L 5139693 5139759 -17871785 + AT_rich Low_complexity Low_complexity 1 66 0 2 624 40 21 0 0 chr2L 5145781 5145828 -17865716 + AT_rich Low_complexity Low_complexity 1 47 0 2 624 201 94 0 0 chr2L 5146703 5146735 -17864809 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 624 192 111 0 0 chr2L 5153970 5154006 -17857538 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 624 216 0 0 0 chr2L 5156981 5157005 -17854539 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 624 23 78 0 0 chr2L 5157108 5157159 -17854385 + AT_rich Low_complexity Low_complexity 1 51 0 2 624 23 0 0 0 chr2L 5157789 5157812 -17853732 + AT_rich Low_complexity Low_complexity 1 23 0 2 624 303 71 0 0 chr2L 5158174 5158216 -17853328 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 624 230 283 20 20 chr2L 5158685 5158786 -17852758 + (CAA)n Simple_repeat Simple_repeat 3 103 0 2 624 279 79 0 0 chr2L 5185040 5185078 -17826466 + (CGA)n Simple_repeat Simple_repeat 2 39 0 2 624 203 147 0 0 chr2L 5185394 5185428 -17826116 + (CCCCCG)n Simple_repeat Simple_repeat 1 34 0 2 624 226 269 15 0 chr2L 5185617 5185684 -17825860 + TART_B1 LINE telomeric 161 228 -10426 2 624 232 245 0 39 chr2L 5185688 5185790 -17825754 + ROO_I LTR Pao 646 743 -7513 2 624 218 211 9 27 chr2L 5185844 5185956 -17825588 + (CAA)n Simple_repeat Simple_repeat 3 112 0 2 624 221 163 0 0 chr2L 5186857 5186900 -17824644 + (CGATA)n Simple_repeat Simple_repeat 2 44 0 2 624 265 224 12 12 chr2L 5189979 5190065 -17821479 + (CAA)n Simple_repeat Simple_repeat 3 88 0 2 624 222 208 0 0 chr2L 5192345 5192393 -17819151 + GA-rich Low_complexity Low_complexity 1 48 0 2 624 31 26 0 0 chr2L 5195699 5195737 -17815807 + AT_rich Low_complexity Low_complexity 1 38 0 2 624 21 36 0 0 chr2L 5202307 5202335 -17809209 + AT_rich Low_complexity Low_complexity 1 28 0 2 624 24 0 0 0 chr2L 5202533 5202557 -17808987 + AT_rich Low_complexity Low_complexity 1 24 0 2 624 25 0 0 0 chr2L 5204778 5204803 -17806741 + AT_rich Low_complexity Low_complexity 1 25 0 2 624 29 28 0 0 chr2L 5206985 5207021 -17804523 + AT_rich Low_complexity Low_complexity 1 36 0 2 624 22 0 0 0 chr2L 5208697 5208719 -17802825 + AT_rich Low_complexity Low_complexity 1 22 0 2 624 21 0 0 0 chr2L 5209322 5209343 -17802201 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 277 235 0 29 chr2L 5209856 5209926 -17801618 - DNAREP1_DM LINE Penelope -1 593 526 2 624 23 92 0 0 chr2L 5216717 5216782 -17794762 + AT_rich Low_complexity Low_complexity 1 65 0 2 624 234 0 0 0 chr2L 5217030 5217056 -17794488 + (CAACC)n Simple_repeat Simple_repeat 1 26 0 2 624 37 0 0 0 chr2L 5219002 5219039 -17792505 + AT_rich Low_complexity Low_complexity 1 37 0 2 624 22 35 0 0 chr2L 5219272 5219301 -17792243 + AT_rich Low_complexity Low_complexity 1 29 0 2 624 180 0 0 0 chr2L 5225554 5225574 -17785970 + (GAATG)n Simple_repeat Simple_repeat 5 24 0 2 624 23 0 0 0 chr2L 5225912 5225935 -17785609 + AT_rich Low_complexity Low_complexity 1 23 0 2 624 215 143 20 39 chr2L 5227494 5227545 -17783999 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 624 249 128 0 0 chr2L 5228766 5228813 -17782731 + (A)n Simple_repeat Simple_repeat 1 47 0 2 624 224 77 0 25 chr2L 5232253 5232293 -17779251 + (TGGA)n Simple_repeat Simple_repeat 2 40 0 2 624 29 0 0 0 chr2L 5233246 5233275 -17778269 + AT_rich Low_complexity Low_complexity 1 29 0 2 624 180 77 0 0 chr2L 5233466 5233492 -17778052 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2 624 239 262 0 0 chr2L 5234968 5235029 -17776515 + T-rich Low_complexity Low_complexity 1 61 0 2 624 192 125 0 0 chr2L 5236380 5236412 -17775132 + (CAA)n Simple_repeat Simple_repeat 3 34 0 2 624 203 171 0 0 chr2L 5236821 5236856 -17774688 + GA-rich Low_complexity Low_complexity 1 35 0 2 624 183 114 0 0 chr2L 5238646 5238681 -17772863 + (CTG)n Simple_repeat Simple_repeat 3 37 0 2 624 23 54 0 0 chr2L 5241004 5241041 -17770503 + AT_rich Low_complexity Low_complexity 1 37 0 2 624 186 43 0 0 chr2L 5241278 5241301 -17770243 + (ATAAG)n Simple_repeat Simple_repeat 3 25 0 2 624 21 36 0 0 chr2L 5242623 5242651 -17768893 + AT_rich Low_complexity Low_complexity 1 28 0 2 625 229 211 18 0 chr2L 5245524 5245581 -17765963 + (CATCC)n Simple_repeat Simple_repeat 4 61 0 2 625 24 0 0 0 chr2L 5246796 5246820 -17764724 + AT_rich Low_complexity Low_complexity 1 24 0 2 625 30 0 0 0 chr2L 5247396 5247426 -17764118 + AT_rich Low_complexity Low_complexity 1 30 0 2 625 186 43 0 0 chr2L 5248067 5248090 -17763454 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2 625 237 146 0 0 chr2L 5253052 5253100 -17758444 + (GGATG)n Simple_repeat Simple_repeat 3 50 0 2 625 231 36 0 0 chr2L 5254660 5254688 -17756856 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 625 180 0 0 0 chr2L 5258080 5258100 -17753444 + (CAG)n Simple_repeat Simple_repeat 2 21 0 2 625 24 0 0 0 chr2L 5259281 5259305 -17752239 + AT_rich Low_complexity Low_complexity 1 24 0 2 625 21 36 0 0 chr2L 5259989 5260017 -17751527 + AT_rich Low_complexity Low_complexity 1 28 0 2 625 22 35 0 0 chr2L 5260721 5260750 -17750794 + AT_rich Low_complexity Low_complexity 1 29 0 2 625 224 241 0 0 chr2L 5261664 5261718 -17749826 + A-rich Low_complexity Low_complexity 1 54 0 2 625 183 42 0 0 chr2L 5262400 5262424 -17749120 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 2 625 273 57 0 0 chr2L 5262567 5262602 -17748942 + (CAG)n Simple_repeat Simple_repeat 2 36 0 2 625 228 228 0 17 chr2L 5262754 5262812 -17748732 + (CTG)n Simple_repeat Simple_repeat 3 59 0 2 625 22 0 0 0 chr2L 5268774 5268796 -17742748 + AT_rich Low_complexity Low_complexity 1 22 0 2 625 22 88 0 0 chr2L 5271544 5271601 -17739943 + AT_rich Low_complexity Low_complexity 1 57 0 2 625 21 57 0 0 chr2L 5273751 5273786 -17737758 + AT_rich Low_complexity Low_complexity 1 35 0 2 625 22 0 0 0 chr2L 5273833 5273855 -17737689 + AT_rich Low_complexity Low_complexity 1 22 0 2 625 243 170 0 0 chr2L 5279911 5279958 -17731586 + (CAG)n Simple_repeat Simple_repeat 1 47 0 2 625 374 281 0 0 chr2L 5280816 5280930 -17730614 + GA-rich Low_complexity Low_complexity 2 115 0 2 625 213 94 0 0 chr2L 5281065 5281097 -17730447 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 625 210 118 0 0 chr2L 5281531 5281565 -17729979 + (CAA)n Simple_repeat Simple_repeat 3 36 0 2 625 23 0 0 0 chr2L 5288372 5288395 -17723149 + AT_rich Low_complexity Low_complexity 1 23 0 2 625 226 170 19 0 chr2L 5289063 5289116 -17722428 + (CAA)n Simple_repeat Simple_repeat 1 54 0 2 625 32 81 0 0 chr2L 5289568 5289642 -17721902 + AT_rich Low_complexity Low_complexity 1 74 0 2 625 28 0 0 0 chr2L 5290097 5290125 -17721419 + AT_rich Low_complexity Low_complexity 1 28 0 2 625 202 283 0 0 chr2L 5298920 5298966 -17712578 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 625 24 0 0 0 chr2L 5298976 5299000 -17712544 + AT_rich Low_complexity Low_complexity 1 24 0 2 625 22 0 0 0 chr2L 5299491 5299513 -17712031 + AT_rich Low_complexity Low_complexity 1 22 0 2 625 22 35 0 0 chr2L 5300029 5300058 -17711486 + AT_rich Low_complexity Low_complexity 1 29 0 2 625 23 33 0 0 chr2L 5300745 5300775 -17710769 + AT_rich Low_complexity Low_complexity 1 30 0 2 625 28 29 0 0 chr2L 5302281 5302316 -17709228 + AT_rich Low_complexity Low_complexity 1 35 0 2 625 207 139 0 0 chr2L 5306626 5306662 -17704882 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 625 223 195 33 33 chr2L 5307584 5307674 -17703870 + (CAG)n Simple_repeat Simple_repeat 2 91 0 2 625 275 239 0 0 chr2L 5308748 5308836 -17702708 + ROO_I LTR Pao 635 722 -7534 2 625 222 37 0 0 chr2L 5310436 5310463 -17701081 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 2 625 195 42 0 0 chr2L 5310471 5310495 -17701049 + (TTA)n Simple_repeat Simple_repeat 3 26 0 2 625 22 0 0 0 chr2L 5313344 5313366 -17698178 + AT_rich Low_complexity Low_complexity 1 22 0 2 625 21 0 0 0 chr2L 5315402 5315423 -17696121 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 217 163 0 23 chr2L 5315425 5315469 -17696075 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 625 181 0 0 65 chr2L 5315882 5315913 -17695631 + (CTTTG)n Simple_repeat Simple_repeat 3 31 0 2 625 248 278 0 0 chr2L 5316144 5316234 -17695310 + T-rich Low_complexity Low_complexity 1 90 0 2 625 216 111 0 0 chr2L 5316397 5316433 -17695111 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 625 186 193 0 0 chr2L 5316994 5317051 -17694493 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 625 284 105 0 34 chr2L 5317668 5317727 -17693817 + (CTG)n Simple_repeat Simple_repeat 2 58 0 2 625 201 139 0 44 chr2L 5318034 5318079 -17693465 + (CTG)n Simple_repeat Simple_repeat 3 45 0 2 625 486 139 0 0 chr2L 5320253 5320339 -17691205 + (CTG)n Simple_repeat Simple_repeat 3 88 0 2 625 223 255 0 0 chr2L 5320450 5320501 -17691043 + (TTG)n Simple_repeat Simple_repeat 1 51 0 2 625 236 167 0 158 chr2L 5321044 5321158 -17690386 - ROO_I LTR Pao -7518 738 643 2 625 268 156 31 62 chr2L 5321190 5321286 -17690258 - ROO_I LTR Pao -7523 733 641 2 625 215 267 0 0 chr2L 5322027 5322087 -17689457 + (CTG)n Simple_repeat Simple_repeat 1 60 0 2 625 386 211 0 55 chr2L 5322097 5322207 -17689337 - ROO_I LTR Pao -7512 744 641 2 625 309 263 8 34 chr2L 5322220 5322338 -17689206 + (CTG)n Simple_repeat Simple_repeat 2 116 0 2 625 201 154 0 0 chr2L 5322660 5322699 -17688845 + (CTG)n Simple_repeat Simple_repeat 1 39 0 2 625 218 320 8 31 chr2L 5323362 5323491 -17688053 + (CTG)n Simple_repeat Simple_repeat 1 126 0 2 625 213 180 0 0 chr2L 5323510 5323560 -17687984 + (CTG)n Simple_repeat Simple_repeat 1 50 0 2 625 264 59 0 0 chr2L 5324403 5324437 -17687107 + (CTG)n Simple_repeat Simple_repeat 3 36 0 2 625 214 106 21 21 chr2L 5326249 5326297 -17685247 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 625 21 0 0 0 chr2L 5326858 5326879 -17684665 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 30 0 0 0 chr2L 5327143 5327173 -17684371 + AT_rich Low_complexity Low_complexity 1 30 0 2 625 34 75 0 11 chr2L 5329096 5329146 -17682398 + AT_rich Low_complexity Low_complexity 1 50 0 2 625 216 0 0 0 chr2L 5329146 5329170 -17682374 + (CTATA)n Simple_repeat Simple_repeat 2 25 0 2 625 34 75 0 11 chr2L 5329170 5329213 -17682331 + AT_rich Low_complexity Low_complexity 1 43 0 2 625 284 83 0 20 chr2L 5332449 5332498 -17679046 + (TCC)n Simple_repeat Simple_repeat 2 49 0 2 625 30 27 0 0 chr2L 5333884 5333921 -17677623 + AT_rich Low_complexity Low_complexity 1 37 0 2 625 21 0 0 0 chr2L 5335694 5335715 -17675829 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 21340 1 0 0 chr2L 5342834 5345142 -17666402 - DOC LINE Jockey 0 4725 2418 2 625 203 194 0 0 chr2L 5347991 5348027 -17663517 + T-rich Low_complexity Low_complexity 1 36 0 2 625 31 0 0 0 chr2L 5349748 5349779 -17661765 + AT_rich Low_complexity Low_complexity 1 31 0 2 625 25 31 0 0 chr2L 5354110 5354142 -17657402 + AT_rich Low_complexity Low_complexity 1 32 0 2 625 27 29 0 0 chr2L 5355972 5356006 -17655538 + AT_rich Low_complexity Low_complexity 1 34 0 2 625 24 0 0 0 chr2L 5356587 5356611 -17654933 + AT_rich Low_complexity Low_complexity 1 24 0 2 625 24 32 0 0 chr2L 5365944 5365975 -17645569 + AT_rich Low_complexity Low_complexity 1 31 0 2 625 28 71 0 0 chr2L 5366210 5366266 -17645278 + AT_rich Low_complexity Low_complexity 1 56 0 2 625 300 240 13 0 chr2L 5369519 5369594 -17641950 - XDMR_DM Unknown Unknown -279 81 6 2 625 1133 273 55 49 chr2L 5369530 5370422 -17641122 + SAR_DM Satellite Satellite 1 897 -357 2 625 391 252 0 8 chr2L 5370321 5370445 -17641099 - XDMR_DM Unknown Unknown -19 341 219 2 625 207 69 0 0 chr2L 5373612 5373641 -17637903 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 626 22 56 0 0 chr2L 5375158 5375194 -17636350 + AT_rich Low_complexity Low_complexity 1 36 0 2 626 203 114 0 54 chr2L 5378078 5378115 -17633429 + (CACTC)n Simple_repeat Simple_repeat 3 37 0 2 626 23 0 0 0 chr2L 5379869 5379892 -17631652 + AT_rich Low_complexity Low_complexity 1 23 0 2 626 21 0 0 0 chr2L 5381336 5381357 -17630187 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 26 93 0 0 chr2L 5382370 5382445 -17629099 + AT_rich Low_complexity Low_complexity 1 75 0 2 626 32 43 0 0 chr2L 5383015 5383061 -17628483 + AT_rich Low_complexity Low_complexity 1 46 0 2 626 23 0 0 0 chr2L 5384890 5384913 -17626631 + AT_rich Low_complexity Low_complexity 1 23 0 2 626 22 35 0 0 chr2L 5386404 5386433 -17625111 + AT_rich Low_complexity Low_complexity 1 29 0 2 626 189 196 0 0 chr2L 5391198 5391244 -17620300 + T-rich Low_complexity Low_complexity 1 46 0 2 626 22 0 0 0 chr2L 5395339 5395361 -17616183 + AT_rich Low_complexity Low_complexity 1 22 0 2 626 186 71 0 0 chr2L 5395779 5395807 -17615737 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2 626 25 0 0 0 chr2L 5401965 5401990 -17609554 + AT_rich Low_complexity Low_complexity 1 25 0 2 626 35 41 0 0 chr2L 5404463 5404512 -17607032 + AT_rich Low_complexity Low_complexity 1 49 0 2 626 225 108 0 0 chr2L 5405023 5405060 -17606484 + (CAT)n Simple_repeat Simple_repeat 1 37 0 2 626 25 0 0 0 chr2L 5406763 5406788 -17604756 + AT_rich Low_complexity Low_complexity 1 25 0 2 626 252 167 0 0 chr2L 5407008 5407056 -17604488 + (CAG)n Simple_repeat Simple_repeat 3 50 0 2 626 193 237 0 54 chr2L 5407097 5407244 -17604300 + (CAA)n Simple_repeat Simple_repeat 3 141 0 2 626 26 50 0 0 chr2L 5407500 5407540 -17604004 + AT_rich Low_complexity Low_complexity 1 40 0 2 626 203 140 0 74 chr2L 5409476 5409530 -17602014 + T-rich Low_complexity Low_complexity 1 50 0 2 626 285 146 0 0 chr2L 5414861 5414909 -17596635 + (CAG)n Simple_repeat Simple_repeat 3 50 0 2 626 209 217 0 0 chr2L 5415033 5415079 -17596465 + (TTG)n Simple_repeat Simple_repeat 2 47 0 2 626 36 23 0 0 chr2L 5415295 5415338 -17596206 + AT_rich Low_complexity Low_complexity 1 43 0 2 626 24 32 0 0 chr2L 5416050 5416081 -17595463 + AT_rich Low_complexity Low_complexity 1 31 0 2 626 225 65 0 0 chr2L 5419831 5419862 -17591682 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 626 206 205 0 0 chr2L 5420570 5420609 -17590935 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 626 224 233 0 16 chr2L 5421847 5421908 -17589636 + GA-rich Low_complexity Low_complexity 2 61 0 2 626 201 178 0 0 chr2L 5422702 5422747 -17588797 + (CTG)n Simple_repeat Simple_repeat 3 47 0 2 626 315 0 0 0 chr2L 5426630 5426665 -17584879 + (TAGA)n Simple_repeat Simple_repeat 2 36 0 2 626 29 78 0 0 chr2L 5429311 5429375 -17582169 + AT_rich Low_complexity Low_complexity 1 64 0 2 626 209 225 0 0 chr2L 5429868 5429908 -17581636 + (ATCTG)n Simple_repeat Simple_repeat 1 40 0 2 626 202 225 0 0 chr2L 5437564 5437604 -17573940 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 2 626 27 0 0 0 chr2L 5438887 5438914 -17572630 + AT_rich Low_complexity Low_complexity 1 27 0 2 626 21 71 0 0 chr2L 5440286 5440328 -17571216 + AT_rich Low_complexity Low_complexity 1 42 0 2 626 238 200 24 85 chr2L 5440497 5440579 -17570965 - ACCORD_I LTR Gypsy -2639 3649 3573 2 626 192 40 0 0 chr2L 5441237 5441262 -17570282 + (ATTCG)n Simple_repeat Simple_repeat 1 25 0 2 626 21 0 0 0 chr2L 5441800 5441821 -17569723 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 26 30 0 0 chr2L 5441970 5442003 -17569541 + AT_rich Low_complexity Low_complexity 1 33 0 2 626 32 75 0 0 chr2L 5444769 5444836 -17566708 + AT_rich Low_complexity Low_complexity 1 67 0 2 626 40 59 0 0 chr2L 5445981 5446049 -17565495 + AT_rich Low_complexity Low_complexity 1 68 0 2 626 25 31 0 0 chr2L 5447117 5447149 -17564395 + AT_rich Low_complexity Low_complexity 1 32 0 2 626 258 56 0 0 chr2L 5448267 5448303 -17563241 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 626 195 69 0 0 chr2L 5449499 5449528 -17562016 + (CACCAT)n Simple_repeat Simple_repeat 4 32 0 2 626 225 65 0 0 chr2L 5452293 5452324 -17559220 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 626 198 0 0 0 chr2L 5453538 5453560 -17557984 + (CAT)n Simple_repeat Simple_repeat 1 22 0 2 626 252 59 0 0 chr2L 5455072 5455106 -17556438 + (AGCTG)n Simple_repeat Simple_repeat 5 38 0 2 626 37 23 0 0 chr2L 5455913 5455957 -17555587 + AT_rich Low_complexity Low_complexity 1 44 0 2 626 28 71 0 0 chr2L 5457427 5457483 -17554061 + AT_rich Low_complexity Low_complexity 1 56 0 2 626 207 167 0 0 chr2L 5463905 5463941 -17547603 + (CCA)n Simple_repeat Simple_repeat 2 37 0 2 626 237 65 0 0 chr2L 5463941 5463972 -17547572 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2 626 231 61 0 0 chr2L 5464293 5464326 -17547218 + (TCCA)n Simple_repeat Simple_repeat 3 35 0 2 626 233 240 19 28 chr2L 5467495 5467602 -17543942 + A-rich Low_complexity Low_complexity 5 110 0 2 626 21 0 0 0 chr2L 5467712 5467733 -17543811 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 207 171 0 0 chr2L 5468946 5468981 -17542563 + (CACAC)n Simple_repeat Simple_repeat 5 39 0 2 626 225 284 0 26 chr2L 5478900 5478976 -17532568 + C-rich Low_complexity Low_complexity 3 76 0 2 626 206 178 0 22 chr2L 5486197 5486243 -17525301 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 626 28 71 0 0 chr2L 5486418 5486474 -17525070 + AT_rich Low_complexity Low_complexity 1 56 0 2 626 210 234 0 0 chr2L 5489993 5490040 -17521504 + T-rich Low_complexity Low_complexity 2 48 0 2 626 344 103 0 17 chr2L 5490112 5490171 -17521373 + (CTG)n Simple_repeat Simple_repeat 3 60 0 2 626 243 286 0 0 chr2L 5490276 5490339 -17521205 + T-rich Low_complexity Low_complexity 1 63 0 2 626 206 167 20 20 chr2L 5494361 5494410 -17517134 + (TCCG)n Simple_repeat Simple_repeat 1 49 0 2 626 22 0 0 0 chr2L 5495186 5495208 -17516336 + AT_rich Low_complexity Low_complexity 1 22 0 2 626 21 0 0 0 chr2L 5495894 5495915 -17515629 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 21 0 0 0 chr2L 5499235 5499256 -17512288 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 28 61 0 0 chr2L 5499550 5499599 -17511945 + AT_rich Low_complexity Low_complexity 1 49 0 2 626 296 247 0 12 chr2L 5500487 5500573 -17510971 + ROO_I LTR Pao 685 769 -7487 2 626 262 254 0 0 chr2L 5500661 5500720 -17510824 + (CAG)n Simple_repeat Simple_repeat 3 61 0 2 626 231 146 0 0 chr2L 5501994 5502035 -17509509 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 627 26 30 0 0 chr2L 5507210 5507243 -17504301 + AT_rich Low_complexity Low_complexity 1 33 0 2 627 195 42 0 0 chr2L 5510840 5510864 -17500680 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 627 189 74 0 0 chr2L 5511749 5511776 -17499768 + (CAG)n Simple_repeat Simple_repeat 3 29 0 2 627 192 40 0 0 chr2L 5511938 5511963 -17499581 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 627 356 114 129 0 chr2L 5512210 5512280 -17499264 + ROO_I LTR Pao 651 729 -7527 2 627 21 0 0 0 chr2L 5513674 5513695 -17497849 + AT_rich Low_complexity Low_complexity 1 21 0 2 627 23 54 0 0 chr2L 5515487 5515524 -17496020 + AT_rich Low_complexity Low_complexity 1 37 0 2 627 396 111 0 0 chr2L 5516079 5516142 -17495402 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 627 27 62 0 0 chr2L 5523996 5524044 -17487500 + AT_rich Low_complexity Low_complexity 1 48 0 2 627 189 171 0 0 chr2L 5525071 5525106 -17486438 + (CAA)n Simple_repeat Simple_repeat 1 35 0 2 627 21 36 0 0 chr2L 5536811 5536839 -17474705 + AT_rich Low_complexity Low_complexity 1 28 0 2 627 22 0 0 0 chr2L 5542441 5542463 -17469081 + AT_rich Low_complexity Low_complexity 1 22 0 2 627 227 150 66 16 chr2L 5546149 5546210 -17465334 + (CATA)n Simple_repeat Simple_repeat 2 65 0 2 627 252 149 0 0 chr2L 5546335 5546382 -17465162 + (CAA)n Simple_repeat Simple_repeat 1 47 0 2 627 31 0 0 0 chr2L 5549400 5549431 -17462113 + AT_rich Low_complexity Low_complexity 1 31 0 2 627 23 33 0 0 chr2L 5558969 5558999 -17452545 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 21 71 0 0 chr2L 5561662 5561704 -17449840 + AT_rich Low_complexity Low_complexity 1 42 0 2 627 31 0 0 0 chr2L 5566777 5566808 -17444736 + AT_rich Low_complexity Low_complexity 1 31 0 2 627 204 67 0 0 chr2L 5569508 5569538 -17442006 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 627 234 0 0 0 chr2L 5570211 5570237 -17441307 + (CAGTT)n Simple_repeat Simple_repeat 1 26 0 2 627 268 183 31 31 chr2L 5570866 5570962 -17440582 + XDMR Unknown Unknown 261 356 -5 2 627 844 274 98 60 chr2L 5570877 5572095 -17439449 - SAR_DM Satellite Satellite -315 1263 1 2 627 290 161 0 0 chr2L 5572056 5572112 -17439432 + XDMR_DM Unknown Unknown 42 97 -263 2 627 315 85 0 0 chr2L 5574659 5574706 -17436838 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 627 202 219 0 0 chr2L 5576223 5576264 -17435280 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 2 627 24 0 0 0 chr2L 5577545 5577569 -17433975 + AT_rich Low_complexity Low_complexity 1 24 0 2 627 210 220 0 33 chr2L 5584163 5584224 -17427320 + (CAGT)n Simple_repeat Simple_repeat 1 59 0 2 627 201 211 25 38 chr2L 5585306 5585385 -17426159 + (TTATG)n Simple_repeat Simple_repeat 4 81 0 2 627 21 36 0 0 chr2L 5587927 5587955 -17423589 + AT_rich Low_complexity Low_complexity 1 28 0 2 627 222 118 0 0 chr2L 5590771 5590805 -17420739 + (CATATA)n Simple_repeat Simple_repeat 6 39 0 2 627 257 250 0 32 chr2L 5591182 5591244 -17420300 - DNAREP1_DM LINE Penelope -533 61 2 2 627 42 57 0 0 chr2L 5592411 5592481 -17419063 + AT_rich Low_complexity Low_complexity 1 70 0 2 627 21 0 0 0 chr2L 5593127 5593148 -17418396 + AT_rich Low_complexity Low_complexity 1 21 0 2 627 234 0 0 0 chr2L 5594028 5594054 -17417490 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 627 201 147 0 0 chr2L 5597992 5598026 -17413518 + (CAG)n Simple_repeat Simple_repeat 2 35 0 2 627 207 191 0 0 chr2L 5600056 5600103 -17411441 + A-rich Low_complexity Low_complexity 1 47 0 2 627 211 192 0 27 chr2L 5601292 5601367 -17410177 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 627 28 0 0 0 chr2L 5601848 5601876 -17409668 + AT_rich Low_complexity Low_complexity 1 28 0 2 627 29 45 0 43 chr2L 5604899 5604968 -17406576 + AT_rich Low_complexity Low_complexity 1 66 0 2 627 267 31 0 0 chr2L 5605089 5605121 -17406423 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 627 23 33 0 0 chr2L 5607126 5607156 -17404388 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 23 33 0 0 chr2L 5607834 5607864 -17403680 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 470 143 11 45 chr2L 5608580 5608668 -17402876 + DNAREP1_DM LINE Penelope 402 486 -108 2 627 21 0 0 0 chr2L 5610892 5610913 -17400631 + AT_rich Low_complexity Low_complexity 1 21 0 2 627 213 132 0 0 chr2L 5615222 5615260 -17396284 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 627 24 53 0 0 chr2L 5615734 5615772 -17395772 + AT_rich Low_complexity Low_complexity 1 38 0 2 627 189 74 0 0 chr2L 5617249 5617276 -17394268 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 627 25 0 0 0 chr2L 5618914 5618939 -17392605 + AT_rich Low_complexity Low_complexity 1 25 0 2 627 198 71 0 0 chr2L 5619342 5619370 -17392174 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 627 183 139 0 0 chr2L 5621345 5621381 -17390163 + (TCC)n Simple_repeat Simple_repeat 1 36 0 2 627 34 0 0 0 chr2L 5622093 5622127 -17389417 + AT_rich Low_complexity Low_complexity 1 34 0 2 627 25 0 0 0 chr2L 5623975 5624000 -17387544 + AT_rich Low_complexity Low_complexity 1 25 0 2 627 27 0 0 0 chr2L 5625126 5625153 -17386391 + AT_rich Low_complexity Low_complexity 1 27 0 2 627 201 182 0 0 chr2L 5625547 5625602 -17385942 + T-rich Low_complexity Low_complexity 1 55 0 2 627 30 0 0 0 chr2L 5625747 5625777 -17385767 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 211 220 0 20 chr2L 5628746 5628797 -17382747 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 627 299 211 0 0 chr2L 5629390 5629442 -17382102 - DNAREP1_DM LINE Penelope -523 71 20 2 627 201 143 0 0 chr2L 5632044 5632079 -17379465 + (CTG)n Simple_repeat Simple_repeat 1 35 0 2 627 216 0 0 0 chr2L 5632101 5632125 -17379419 + (GGA)n Simple_repeat Simple_repeat 2 25 0 2 627 216 0 0 0 chr2L 5633165 5633189 -17378355 + (AACTG)n Simple_repeat Simple_repeat 2 25 0 2 627 192 125 0 0 chr2L 5633268 5633300 -17378244 + (CAGCT)n Simple_repeat Simple_repeat 1 32 0 2 627 180 125 0 0 chr2L 5635094 5635126 -17376418 + (CCGAA)n Simple_repeat Simple_repeat 4 35 0 2 627 22 0 0 0 chr2L 5635222 5635244 -17376300 + AT_rich Low_complexity Low_complexity 1 22 0 2 628 209 211 0 0 chr2L 5640156 5640194 -17371350 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 2 628 198 91 0 0 chr2L 5642343 5642376 -17369168 + (TTTAA)n Simple_repeat Simple_repeat 2 34 0 2 628 21 0 0 0 chr2L 5647601 5647622 -17363922 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 237 65 0 0 chr2L 5650859 5650890 -17360654 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 628 24 32 0 0 chr2L 5652301 5652332 -17359212 + AT_rich Low_complexity Low_complexity 1 31 0 2 628 24 67 0 0 chr2L 5652505 5652550 -17358994 + AT_rich Low_complexity Low_complexity 1 45 0 2 628 56 39 0 0 chr2L 5652630 5652707 -17358837 + AT_rich Low_complexity Low_complexity 1 77 0 2 628 234 62 0 0 chr2L 5657614 5657646 -17353898 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 628 201 154 0 0 chr2L 5672900 5672939 -17338605 + (TTTCG)n Simple_repeat Simple_repeat 3 41 0 2 628 203 339 0 0 chr2L 5674574 5674630 -17336914 + G-rich Low_complexity Low_complexity 3 58 0 2 628 24 0 0 0 chr2L 5678227 5678251 -17333293 + AT_rich Low_complexity Low_complexity 1 24 0 2 628 214 162 0 0 chr2L 5679345 5679382 -17332162 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 628 207 69 0 0 chr2L 5682595 5682624 -17328920 + (CAGA)n Simple_repeat Simple_repeat 3 31 0 2 628 218 234 0 45 chr2L 5691159 5691226 -17320318 + (GCTG)n Simple_repeat Simple_repeat 4 67 0 2 628 21 0 0 0 chr2L 5691641 5691662 -17319882 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 24 32 0 0 chr2L 5698789 5698820 -17312724 + AT_rich Low_complexity Low_complexity 1 31 0 2 628 268 133 0 0 chr2L 5699264 5699309 -17312235 - DNAREP1_DM LINE Penelope -99 495 451 2 628 186 43 0 0 chr2L 5700746 5700769 -17310775 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 628 288 53 0 0 chr2L 5701324 5701362 -17310182 + (CAG)n Simple_repeat Simple_repeat 3 40 0 2 628 22 35 0 0 chr2L 5703029 5703058 -17308486 + AT_rich Low_complexity Low_complexity 1 29 0 2 628 24 32 0 0 chr2L 5705070 5705101 -17306443 + AT_rich Low_complexity Low_complexity 1 31 0 2 628 183 114 0 0 chr2L 5710146 5710181 -17301363 + (A)n Simple_repeat Simple_repeat 1 35 0 2 628 195 42 0 0 chr2L 5710954 5710978 -17300566 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 628 25 31 0 0 chr2L 5711700 5711732 -17299812 + AT_rich Low_complexity Low_complexity 1 32 0 2 628 26 0 0 0 chr2L 5718108 5718134 -17293410 + AT_rich Low_complexity Low_complexity 1 26 0 2 628 227 31 0 30 chr2L 5724469 5724502 -17287042 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2 628 183 42 0 0 chr2L 5730071 5730095 -17281449 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 628 32 43 0 0 chr2L 5730715 5730761 -17280783 + AT_rich Low_complexity Low_complexity 1 46 0 2 628 242 183 83 0 chr2L 5730865 5730925 -17280619 - ROO_I LTR Pao -7554 702 638 2 628 212 295 0 40 chr2L 5731141 5731240 -17280304 + G-rich Low_complexity Low_complexity 6 100 0 2 628 230 182 0 18 chr2L 5731466 5731522 -17280022 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 628 23 0 0 0 chr2L 5736944 5736967 -17274577 + AT_rich Low_complexity Low_complexity 1 23 0 2 628 23 68 0 0 chr2L 5742092 5742136 -17269408 + AT_rich Low_complexity Low_complexity 1 44 0 2 628 28 71 0 0 chr2L 5743124 5743180 -17268364 + AT_rich Low_complexity Low_complexity 1 56 0 2 628 21 0 0 0 chr2L 5743721 5743742 -17267802 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 22 0 0 0 chr2L 5745019 5745041 -17266503 + AT_rich Low_complexity Low_complexity 1 22 0 2 628 24 0 0 0 chr2L 5747770 5747794 -17263750 + AT_rich Low_complexity Low_complexity 1 24 0 2 628 33 0 0 0 chr2L 5748077 5748110 -17263434 + AT_rich Low_complexity Low_complexity 1 33 0 2 628 25 0 0 0 chr2L 5748312 5748337 -17263207 + AT_rich Low_complexity Low_complexity 1 25 0 2 628 21 0 0 0 chr2L 5752021 5752042 -17259502 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 25 31 0 0 chr2L 5752445 5752477 -17259067 + AT_rich Low_complexity Low_complexity 1 32 0 2 628 22 0 0 0 chr2L 5752876 5752898 -17258646 + AT_rich Low_complexity Low_complexity 1 22 0 2 628 21 0 0 0 chr2L 5755081 5755102 -17256442 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 197 149 0 41 chr2L 5757142 5757191 -17254353 + (TATATG)n Simple_repeat Simple_repeat 3 49 0 2 628 249 289 0 0 chr2L 5759138 5759214 -17252330 + (CGA)n Simple_repeat Simple_repeat 2 77 0 2 628 25 110 0 0 chr2L 5760002 5760111 -17251433 + AT_rich Low_complexity Low_complexity 1 109 0 2 628 21 71 0 0 chr2L 5760890 5760932 -17250612 + AT_rich Low_complexity Low_complexity 1 42 0 2 628 36 23 0 0 chr2L 5761352 5761395 -17250149 + AT_rich Low_complexity Low_complexity 1 43 0 2 628 189 154 0 0 chr2L 5766992 5767031 -17244513 + T-rich Low_complexity Low_complexity 1 39 0 2 629 23 33 0 0 chr2L 5771468 5771498 -17240046 + AT_rich Low_complexity Low_complexity 1 30 0 2 629 27 0 0 0 chr2L 5771944 5771971 -17239573 + AT_rich Low_complexity Low_complexity 1 27 0 2 629 237 239 0 43 chr2L 5781340 5781410 -17230134 - DNAREP1_DM LINE Penelope -523 71 5 2 629 23 0 0 0 chr2L 5791836 5791859 -17219685 + AT_rich Low_complexity Low_complexity 1 23 0 2 629 28 29 0 0 chr2L 5797323 5797358 -17214186 + AT_rich Low_complexity Low_complexity 1 35 0 2 629 213 47 70 0 chr2L 5800457 5800500 -17211044 + (TATAG)n Simple_repeat Simple_repeat 4 49 0 2 629 184 122 0 58 chr2L 5802950 5803002 -17208542 + (CAG)n Simple_repeat Simple_repeat 2 50 0 2 629 236 298 0 0 chr2L 5803044 5803101 -17208443 + (CAG)n Simple_repeat Simple_repeat 1 57 0 2 629 288 111 0 0 chr2L 5803255 5803300 -17208244 + (CAG)n Simple_repeat Simple_repeat 1 45 0 2 629 25 0 0 0 chr2L 5804003 5804028 -17207516 + AT_rich Low_complexity Low_complexity 1 25 0 2 629 23 54 0 0 chr2L 5804144 5804181 -17207363 + AT_rich Low_complexity Low_complexity 1 37 0 2 629 21 36 0 0 chr2L 5804669 5804697 -17206847 + AT_rich Low_complexity Low_complexity 1 28 0 2 629 186 71 0 0 chr2L 5810689 5810717 -17200827 + (A)n Simple_repeat Simple_repeat 1 28 0 2 629 219 36 0 0 chr2L 5812392 5812420 -17199124 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 629 21 0 0 0 chr2L 5815186 5815207 -17196337 + AT_rich Low_complexity Low_complexity 1 21 0 2 629 21 36 0 0 chr2L 5818308 5818336 -17193208 + AT_rich Low_complexity Low_complexity 1 28 0 2 629 24 32 0 0 chr2L 5824626 5824657 -17186887 + AT_rich Low_complexity Low_complexity 1 31 0 2 629 3742 2 0 0 chr2L 5827762 5828190 -17183354 - ROO_LTR LTR Pao 0 428 1 2 629 7719 3 13 0 chr2L 5828190 5829113 -17182431 - ROO_I LTR Pao 0 8256 7322 2 629 41782 1 2 0 chr2L 5829113 5836284 -17175260 - ROO_I LTR Pao -1052 7204 1 2 629 3999 2 0 0 chr2L 5836284 5836712 -17174832 - ROO_LTR LTR Pao 0 428 1 2 629 21 0 0 0 chr2L 5837020 5837041 -17174503 + AT_rich Low_complexity Low_complexity 1 21 0 2 629 284 167 0 0 chr2L 5837183 5837231 -17174313 - DNAREP1_DM LINE Penelope -532 62 15 2 629 22 0 0 0 chr2L 5841370 5841392 -17170152 + AT_rich Low_complexity Low_complexity 1 22 0 2 629 239 304 0 0 chr2L 5842548 5842617 -17168927 + (TCCG)n Simple_repeat Simple_repeat 4 72 0 2 629 22 0 0 0 chr2L 5842871 5842893 -17168651 + AT_rich Low_complexity Low_complexity 1 22 0 2 629 180 0 0 0 chr2L 5846838 5846858 -17164686 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 629 23 0 0 0 chr2L 5847986 5848009 -17163535 + AT_rich Low_complexity Low_complexity 1 23 0 2 629 21 36 0 0 chr2L 5851160 5851188 -17160356 + AT_rich Low_complexity Low_complexity 1 28 0 2 629 252 130 0 0 chr2L 5851611 5851657 -17159887 + (CACCAT)n Simple_repeat Simple_repeat 2 47 0 2 629 21 0 0 0 chr2L 5855615 5855636 -17155908 + AT_rich Low_complexity Low_complexity 1 21 0 2 629 25 0 0 0 chr2L 5856031 5856056 -17155488 + AT_rich Low_complexity Low_complexity 1 25 0 2 629 213 121 0 0 chr2L 5864553 5864586 -17146958 + (TGGA)n Simple_repeat Simple_repeat 2 34 0 2 629 195 100 0 0 chr2L 5866930 5866960 -17144584 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 629 266 115 0 19 chr2L 5867762 5867815 -17143729 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 629 201 162 0 0 chr2L 5871768 5871805 -17139739 + (CATTT)n Simple_repeat Simple_repeat 3 39 0 2 629 25 51 0 0 chr2L 5879669 5879708 -17131836 + AT_rich Low_complexity Low_complexity 1 39 0 2 629 23 0 0 0 chr2L 5882610 5882633 -17128911 + AT_rich Low_complexity Low_complexity 1 23 0 2 629 21 36 0 0 chr2L 5883964 5883992 -17127552 + AT_rich Low_complexity Low_complexity 1 28 0 2 629 27 0 0 0 chr2L 5888521 5888548 -17122996 + AT_rich Low_complexity Low_complexity 1 27 0 2 630 22 0 0 0 chr2L 5906930 5906952 -17104592 + AT_rich Low_complexity Low_complexity 1 22 0 2 630 23 0 0 0 chr2L 5915399 5915422 -17096122 + AT_rich Low_complexity Low_complexity 1 23 0 2 630 34 24 0 0 chr2L 5921471 5921512 -17090032 + AT_rich Low_complexity Low_complexity 1 41 0 2 630 27 49 0 0 chr2L 5923563 5923604 -17087940 + AT_rich Low_complexity Low_complexity 1 41 0 2 630 27 62 0 0 chr2L 5924783 5924831 -17086713 + AT_rich Low_complexity Low_complexity 1 48 0 2 630 217 220 0 0 chr2L 5925282 5925332 -17086212 + (TGGG)n Simple_repeat Simple_repeat 1 50 0 2 630 219 226 0 0 chr2L 5925492 5925545 -17085999 + (TGGG)n Simple_repeat Simple_repeat 4 56 0 2 630 27 29 0 0 chr2L 5927951 5927985 -17083559 + AT_rich Low_complexity Low_complexity 1 34 0 2 630 24 0 0 0 chr2L 5928779 5928803 -17082741 + AT_rich Low_complexity Low_complexity 1 24 0 2 630 195 235 0 0 chr2L 5932294 5932345 -17079199 + (CATA)n Simple_repeat Simple_repeat 1 51 0 2 630 204 200 0 0 chr2L 5932484 5932539 -17079005 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 630 230 0 33 0 chr2L 5933085 5933115 -17078429 + (TAA)n Simple_repeat Simple_repeat 3 33 0 2 630 201 74 0 0 chr2L 5936248 5936275 -17075269 + (CACCAT)n Simple_repeat Simple_repeat 3 29 0 2 630 219 139 0 0 chr2L 5937098 5937134 -17074410 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2 630 37 0 0 0 chr2L 5939259 5939296 -17072248 + AT_rich Low_complexity Low_complexity 1 37 0 2 630 21 0 0 0 chr2L 5942610 5942631 -17068913 + AT_rich Low_complexity Low_complexity 1 21 0 2 630 21 36 0 0 chr2L 5942690 5942718 -17068826 + AT_rich Low_complexity Low_complexity 1 28 0 2 630 182 91 30 0 chr2L 5943858 5943891 -17067653 + (TC)n Simple_repeat Simple_repeat 2 35 0 2 630 34 0 0 0 chr2L 5947629 5947663 -17063881 + AT_rich Low_complexity Low_complexity 1 34 0 2 630 23 0 0 0 chr2L 5948158 5948181 -17063363 + AT_rich Low_complexity Low_complexity 1 23 0 2 630 27 29 0 0 chr2L 5952817 5952851 -17058693 + AT_rich Low_complexity Low_complexity 1 34 0 2 630 223 345 0 11 chr2L 5957249 5957431 -17054113 + (CCG)n Simple_repeat Simple_repeat 1 180 0 2 630 36 62 0 0 chr2L 5957970 5958034 -17053510 + AT_rich Low_complexity Low_complexity 1 64 0 2 630 25 75 0 0 chr2L 5960732 5960785 -17050759 + AT_rich Low_complexity Low_complexity 1 53 0 2 630 21 0 0 0 chr2L 5961088 5961109 -17050435 + AT_rich Low_complexity Low_complexity 1 21 0 2 630 25 90 0 0 chr2L 5962554 5962621 -17048923 + AT_rich Low_complexity Low_complexity 1 67 0 2 630 204 135 0 0 chr2L 5964022 5964059 -17047485 + (TTG)n Simple_repeat Simple_repeat 1 37 0 2 630 234 184 0 0 chr2L 5973096 5973145 -17038399 + T-rich Low_complexity Low_complexity 1 49 0 2 630 24 32 0 0 chr2L 5973415 5973446 -17038098 + AT_rich Low_complexity Low_complexity 1 31 0 2 630 313 95 0 31 chr2L 5973483 5973548 -17037996 + (TTG)n Simple_repeat Simple_repeat 1 63 0 2 630 207 108 27 0 chr2L 5974504 5974541 -17037003 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 630 228 86 0 0 chr2L 5977289 5977324 -17034220 + (CCA)n Simple_repeat Simple_repeat 2 36 0 2 630 204 200 0 0 chr2L 5977552 5977602 -17033942 + GA-rich Low_complexity Low_complexity 2 51 0 2 630 195 42 0 0 chr2L 5979719 5979743 -17031801 + (GA)n Simple_repeat Simple_repeat 1 24 0 2 630 213 209 0 0 chr2L 5980699 5980742 -17030802 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 630 271 87 43 21 chr2L 5985128 5985175 -17026369 + BLOOD_I LTR Gypsy 35 82 -6531 2 630 21 36 0 0 chr2L 5985303 5985331 -17026213 + AT_rich Low_complexity Low_complexity 1 28 0 2 630 242 182 15 0 chr2L 5985380 5985446 -17026098 + (CAG)n Simple_repeat Simple_repeat 2 68 0 2 630 24 32 0 0 chr2L 5985541 5985572 -17025972 + AT_rich Low_complexity Low_complexity 1 31 0 2 630 35 41 0 0 chr2L 5989410 5989459 -17022085 + AT_rich Low_complexity Low_complexity 1 49 0 2 630 22 0 0 0 chr2L 5989842 5989864 -17021680 + AT_rich Low_complexity Low_complexity 1 22 0 2 630 189 121 0 0 chr2L 5989942 5989975 -17021569 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 2 630 23 0 0 0 chr2L 5990258 5990281 -17021263 + AT_rich Low_complexity Low_complexity 1 23 0 2 630 232 266 0 0 chr2L 5990388 5990452 -17021092 + T-rich Low_complexity Low_complexity 1 64 0 2 630 195 220 0 0 chr2L 5991021 5991071 -17020473 + (TTG)n Simple_repeat Simple_repeat 1 50 0 2 630 216 179 0 0 chr2L 5997645 5997684 -17013860 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 630 27 0 0 0 chr2L 6001441 6001468 -17010076 + AT_rich Low_complexity Low_complexity 1 27 0 2 630 183 42 0 0 chr2L 6007246 6007270 -17004274 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2 630 186 43 0 0 chr2L 6009906 6009929 -17001615 + (CTG)n Simple_repeat Simple_repeat 3 25 0 2 630 242 253 0 0 chr2L 6013975 6014050 -16997494 + (ATGGTG)n Simple_repeat Simple_repeat 3 77 0 2 630 22 80 0 0 chr2L 6022992 6023042 -16988502 + AT_rich Low_complexity Low_complexity 1 50 0 2 630 21 0 0 0 chr2L 6025196 6025217 -16986327 + AT_rich Low_complexity Low_complexity 1 21 0 2 630 26 0 0 0 chr2L 6027735 6027761 -16983783 + AT_rich Low_complexity Low_complexity 1 26 0 2 631 24 0 0 0 chr2L 6032169 6032193 -16979351 + AT_rich Low_complexity Low_complexity 1 24 0 2 631 24 32 0 0 chr2L 6048036 6048067 -16963477 + AT_rich Low_complexity Low_complexity 1 31 0 2 631 21 36 0 0 chr2L 6053628 6053656 -16957888 + AT_rich Low_complexity Low_complexity 1 28 0 2 631 195 139 0 0 chr2L 6054438 6054474 -16957070 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 631 251 309 0 0 chr2L 6054747 6054815 -16956729 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 631 206 190 0 23 chr2L 6059031 6059074 -16952470 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 631 22 0 0 0 chr2L 6066147 6066169 -16945375 + AT_rich Low_complexity Low_complexity 1 22 0 2 631 21 36 0 0 chr2L 6068877 6068905 -16942639 + AT_rich Low_complexity Low_complexity 1 28 0 2 631 26 30 0 0 chr2L 6070822 6070855 -16940689 + AT_rich Low_complexity Low_complexity 1 33 0 2 631 198 0 0 0 chr2L 6075404 6075426 -16936118 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 631 277 254 0 0 chr2L 6075561 6075624 -16935920 + C-rich Low_complexity Low_complexity 89 151 0 2 631 195 69 0 0 chr2L 6075956 6075985 -16935559 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 2 631 186 71 0 0 chr2L 6076384 6076412 -16935132 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2 631 27 0 0 0 chr2L 6077456 6077483 -16934061 + AT_rich Low_complexity Low_complexity 1 27 0 2 631 28 0 0 0 chr2L 6080764 6080792 -16930752 + AT_rich Low_complexity Low_complexity 1 28 0 2 631 26 30 0 0 chr2L 6080828 6080861 -16930683 + AT_rich Low_complexity Low_complexity 1 33 0 2 631 207 182 0 0 chr2L 6081892 6081925 -16929619 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2 631 30 45 0 0 chr2L 6082011 6082055 -16929489 + AT_rich Low_complexity Low_complexity 1 44 0 2 631 21 0 0 0 chr2L 6083205 6083226 -16928318 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 28 29 0 0 chr2L 6083761 6083796 -16927748 + AT_rich Low_complexity Low_complexity 1 35 0 2 631 207 162 0 0 chr2L 6086089 6086126 -16925418 + (CATA)n Simple_repeat Simple_repeat 3 39 0 2 631 27 0 0 0 chr2L 6090164 6090191 -16921353 + AT_rich Low_complexity Low_complexity 1 27 0 2 631 264 100 0 0 chr2L 6091513 6091553 -16919991 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 631 269 243 0 0 chr2L 6093162 6093236 -16918308 + (CAG)n Simple_repeat Simple_repeat 2 75 0 2 631 186 143 0 0 chr2L 6093260 6093295 -16918249 + (CAG)n Simple_repeat Simple_repeat 1 35 0 2 631 24 53 0 0 chr2L 6096103 6096141 -16915403 + AT_rich Low_complexity Low_complexity 1 38 0 2 631 25 31 0 0 chr2L 6096857 6096889 -16914655 + AT_rich Low_complexity Low_complexity 1 32 0 2 631 25 31 0 0 chr2L 6100021 6100053 -16911491 + AT_rich Low_complexity Low_complexity 1 32 0 2 631 27 49 0 0 chr2L 6100981 6101022 -16910522 + AT_rich Low_complexity Low_complexity 1 41 0 2 631 2507 88 8 3 chr2L 6101130 6101519 -16910025 + S_DM DNA Tc1 1 391 -1345 2 631 599 88 48 0 chr2L 6101514 6101639 -16909905 - S_DM DNA Tc1 -1556 180 50 2 631 32 43 0 0 chr2L 6101899 6101945 -16909599 + AT_rich Low_complexity Low_complexity 1 46 0 2 631 254 196 0 0 chr2L 6107197 6107243 -16904301 + DNAREP1_DM LINE Penelope 19 64 -530 2 631 221 184 20 0 chr2L 6107652 6107701 -16903843 + (CGA)n Simple_repeat Simple_repeat 3 52 0 2 631 40 37 0 0 chr2L 6107923 6107977 -16903567 + AT_rich Low_complexity Low_complexity 1 54 0 2 631 23 0 0 0 chr2L 6110036 6110059 -16901485 + AT_rich Low_complexity Low_complexity 1 23 0 2 631 27 29 0 0 chr2L 6116347 6116381 -16895163 + AT_rich Low_complexity Low_complexity 1 34 0 2 631 21 0 0 0 chr2L 6124088 6124109 -16887435 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 272 220 0 0 chr2L 6135233 6135292 -16876252 + DNAREP1_DM LINE Penelope 1 59 -535 2 631 324 83 0 0 chr2L 6139076 6139124 -16872420 + (CAT)n Simple_repeat Simple_repeat 3 50 0 2 631 201 208 0 20 chr2L 6145690 6145739 -16865805 + A-rich Low_complexity Low_complexity 2 49 0 2 631 210 189 0 19 chr2L 6146675 6146729 -16864815 + T-rich Low_complexity Low_complexity 2 54 0 2 631 246 105 0 0 chr2L 6147638 6147676 -16863868 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 2 631 287 19 18 55 chr2L 6149549 6149604 -16861940 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 631 405 258 0 33 chr2L 6152561 6152745 -16858799 + (CAA)n Simple_repeat Simple_repeat 1 178 0 2 631 380 264 0 33 chr2L 6152849 6153033 -16858511 + (CAA)n Simple_repeat Simple_repeat 1 178 0 2 631 31 44 0 0 chr2L 6155843 6155888 -16855656 + AT_rich Low_complexity Low_complexity 1 45 0 2 631 198 0 0 0 chr2L 6156799 6156821 -16854723 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 631 205 86 29 0 chr2L 6157335 6157370 -16854174 + (TAA)n Simple_repeat Simple_repeat 3 38 0 2 631 27 0 0 0 chr2L 6157931 6157958 -16853586 + AT_rich Low_complexity Low_complexity 1 27 0 2 631 30 45 0 0 chr2L 6158067 6158111 -16853433 + AT_rich Low_complexity Low_complexity 1 44 0 2 632 207 281 0 45 chr2L 6162142 6162209 -16849335 + A-rich Low_complexity Low_complexity 3 66 0 2 632 216 149 0 0 chr2L 6166330 6166377 -16845167 + (T)n Simple_repeat Simple_repeat 1 47 0 2 632 22 35 0 0 chr2L 6173327 6173356 -16838188 + AT_rich Low_complexity Low_complexity 1 29 0 2 632 215 133 22 0 chr2L 6176047 6176092 -16835452 + (CTG)n Simple_repeat Simple_repeat 3 48 0 2 632 180 0 0 0 chr2L 6176333 6176353 -16835191 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2 632 315 214 0 0 chr2L 6176505 6176575 -16834969 + (CTCA)n Simple_repeat Simple_repeat 2 71 0 2 632 22 35 0 0 chr2L 6177994 6178023 -16833521 + AT_rich Low_complexity Low_complexity 1 29 0 2 632 21 0 0 0 chr2L 6185755 6185776 -16825768 + AT_rich Low_complexity Low_complexity 1 21 0 2 632 318 26 0 0 chr2L 6186643 6186682 -16824862 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 632 195 129 0 0 chr2L 6188364 6188395 -16823149 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 2 632 211 224 0 0 chr2L 6197839 6197888 -16813656 + A-rich Low_complexity Low_complexity 1 49 0 2 632 180 0 0 0 chr2L 6199437 6199457 -16812087 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 2 632 237 33 0 0 chr2L 6199915 6199945 -16811599 + (GGA)n Simple_repeat Simple_repeat 3 32 0 2 632 225 0 0 0 chr2L 6204906 6204931 -16806613 + (GGATG)n Simple_repeat Simple_repeat 2 26 0 2 632 21 0 0 0 chr2L 6205467 6205488 -16806056 + AT_rich Low_complexity Low_complexity 1 21 0 2 632 255 275 12 12 chr2L 6208120 6208201 -16803343 + (CAG)n Simple_repeat Simple_repeat 3 83 0 2 632 302 45 0 22 chr2L 6209249 6209294 -16802250 + (CGAAT)n Simple_repeat Simple_repeat 1 44 0 2 632 200 222 0 0 chr2L 6212475 6212520 -16799024 + T-rich Low_complexity Low_complexity 2 46 0 2 632 207 0 0 0 chr2L 6221739 6221762 -16789782 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 632 21 36 0 0 chr2L 6222544 6222572 -16788972 + AT_rich Low_complexity Low_complexity 1 28 0 2 632 208 276 0 0 chr2L 6222593 6222651 -16788893 + (GGGTG)n Simple_repeat Simple_repeat 4 61 0 2 632 26 0 0 0 chr2L 6226794 6226820 -16784724 + AT_rich Low_complexity Low_complexity 1 26 0 2 632 195 69 0 0 chr2L 6227423 6227452 -16784092 + (T)n Simple_repeat Simple_repeat 1 29 0 2 632 195 69 0 0 chr2L 6232162 6232191 -16779353 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 2 632 21 0 0 0 chr2L 6234370 6234391 -16777153 + AT_rich Low_complexity Low_complexity 1 21 0 2 632 24 0 0 0 chr2L 6235923 6235947 -16775597 + AT_rich Low_complexity Low_complexity 1 24 0 2 632 475 245 37 19 chr2L 6237015 6237177 -16774367 - XDMR Unknown Unknown -196 165 1 2 632 1100 222 30 27 chr2L 6237038 6237339 -16774205 + SAR_DM Satellite Satellite 576 877 -595 2 632 183 100 0 0 chr2L 6239636 6239666 -16771878 + (ACTG)n Simple_repeat Simple_repeat 1 30 0 2 632 206 62 31 0 chr2L 6239784 6239816 -16771728 + (CAGCC)n Simple_repeat Simple_repeat 5 37 0 2 632 25 0 0 0 chr2L 6243926 6243951 -16767593 + AT_rich Low_complexity Low_complexity 1 25 0 2 632 30 27 0 0 chr2L 6244055 6244092 -16767452 + AT_rich Low_complexity Low_complexity 1 37 0 2 632 181 93 0 85 chr2L 6246744 6246791 -16764753 + (TCTCTG)n Simple_repeat Simple_repeat 2 44 0 2 632 222 214 18 0 chr2L 6249492 6249548 -16761996 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 632 25 31 0 0 chr2L 6254658 6254690 -16756854 + AT_rich Low_complexity Low_complexity 1 32 0 2 632 23 0 0 0 chr2L 6258816 6258839 -16752705 + AT_rich Low_complexity Low_complexity 1 23 0 2 632 226 218 0 18 chr2L 6264121 6264177 -16747367 + (TGG)n Simple_repeat Simple_repeat 2 56 0 2 632 32 43 0 0 chr2L 6273154 6273200 -16738344 + AT_rich Low_complexity Low_complexity 1 46 0 2 632 247 257 0 0 chr2L 6274475 6274549 -16736995 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 2 632 26 30 0 0 chr2L 6277518 6277551 -16733993 + AT_rich Low_complexity Low_complexity 1 33 0 2 632 208 250 0 40 chr2L 6278092 6278142 -16733402 + G-rich Low_complexity Low_complexity 5 52 0 2 632 180 0 0 0 chr2L 6278928 6278948 -16732596 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 632 228 128 0 93 chr2L 6279675 6279718 -16731826 + DNAREP1_DM LINE Penelope 416 454 -140 2 632 180 0 0 0 chr2L 6285277 6285297 -16726247 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 632 35 0 0 0 chr2L 6290959 6290994 -16720550 + AT_rich Low_complexity Low_complexity 1 35 0 2 633 217 244 0 0 chr2L 6294142 6294183 -16717361 + (CATA)n Simple_repeat Simple_repeat 3 43 0 2 633 33 43 0 0 chr2L 6297910 6297957 -16713587 + AT_rich Low_complexity Low_complexity 1 47 0 2 633 21 0 0 0 chr2L 6298938 6298959 -16712585 + AT_rich Low_complexity Low_complexity 1 21 0 2 633 21 0 0 0 chr2L 6299298 6299319 -16712225 + AT_rich Low_complexity Low_complexity 1 21 0 2 633 23 0 0 0 chr2L 6305073 6305096 -16706448 + AT_rich Low_complexity Low_complexity 1 23 0 2 633 198 0 0 0 chr2L 6306368 6306390 -16705154 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 633 246 127 15 60 chr2L 6306845 6306912 -16704632 + (CCAA)n Simple_repeat Simple_repeat 2 65 0 2 633 23 54 0 0 chr2L 6307363 6307400 -16704144 + AT_rich Low_complexity Low_complexity 1 37 0 2 633 195 69 0 0 chr2L 6310428 6310457 -16701087 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 633 24 0 0 0 chr2L 6311653 6311677 -16699867 + AT_rich Low_complexity Low_complexity 1 24 0 2 633 22 35 0 0 chr2L 6312356 6312385 -16699159 + AT_rich Low_complexity Low_complexity 1 29 0 2 633 213 132 0 0 chr2L 6318217 6318255 -16693289 + (CTG)n Simple_repeat Simple_repeat 1 38 0 2 633 30 59 0 0 chr2L 6323212 6323263 -16688281 + AT_rich Low_complexity Low_complexity 1 51 0 2 633 205 323 0 0 chr2L 6328977 6329042 -16682502 + (TGG)n Simple_repeat Simple_repeat 3 67 0 2 633 226 218 18 0 chr2L 6330153 6330208 -16681336 + (CAG)n Simple_repeat Simple_repeat 3 58 0 2 633 182 91 30 0 chr2L 6331915 6331948 -16679596 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 633 23 33 0 0 chr2L 6332378 6332408 -16679136 + AT_rich Low_complexity Low_complexity 1 30 0 2 633 22 35 0 0 chr2L 6332764 6332793 -16678751 + AT_rich Low_complexity Low_complexity 1 29 0 2 633 230 141 59 59 chr2L 6336222 6336290 -16675254 - ROO_I LTR Pao -7538 718 651 2 633 312 137 0 0 chr2L 6337967 6338018 -16673526 + (TTG)n Simple_repeat Simple_repeat 3 53 0 2 633 21 0 0 0 chr2L 6338566 6338587 -16672957 + AT_rich Low_complexity Low_complexity 1 21 0 2 633 180 0 0 0 chr2L 6339313 6339333 -16672211 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 633 23 0 0 0 chr2L 6340184 6340207 -16671337 + AT_rich Low_complexity Low_complexity 1 23 0 2 633 21 0 0 0 chr2L 6346509 6346530 -16665014 + AT_rich Low_complexity Low_complexity 1 21 0 2 633 24 32 0 0 chr2L 6352280 6352311 -16659233 + AT_rich Low_complexity Low_complexity 1 31 0 2 633 180 77 0 0 chr2L 6361582 6361608 -16649936 + (TCTCTG)n Simple_repeat Simple_repeat 1 26 0 2 633 219 239 0 0 chr2L 6362566 6362612 -16648932 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 633 2458 7 0 4 chr2L 6363204 6363480 -16648064 + BURDOCK_LTR LTR Gypsy 1 275 0 2 633 8881 6 0 0 chr2L 6363480 6364469 -16647075 + BURDOCK_I LTR Gypsy 1 989 -4871 2 633 12172 1 1 1 chr2L 6364459 6365792 -16645752 + BURDOCK_I LTR Gypsy 4528 5860 0 2 633 2458 7 0 4 chr2L 6365793 6366069 -16645475 + BURDOCK_LTR LTR Gypsy 1 275 0 2 633 23 0 0 0 chr2L 6366408 6366431 -16645113 + AT_rich Low_complexity Low_complexity 1 23 0 2 633 22 0 0 0 chr2L 6366531 6366553 -16644991 + AT_rich Low_complexity Low_complexity 1 22 0 2 633 21 57 0 0 chr2L 6366720 6366755 -16644789 + AT_rich Low_complexity Low_complexity 1 35 0 2 633 22 0 0 0 chr2L 6366812 6366834 -16644710 + AT_rich Low_complexity Low_complexity 1 22 0 2 633 264 100 0 0 chr2L 6371555 6371595 -16639949 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 2 633 180 158 0 0 chr2L 6377900 6377938 -16633606 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 633 21 0 0 0 chr2L 6388081 6388102 -16623442 + AT_rich Low_complexity Low_complexity 1 21 0 2 633 21 0 0 0 chr2L 6388770 6388791 -16622753 + AT_rich Low_complexity Low_complexity 1 21 0 2 633 233 226 16 0 chr2L 6390502 6390564 -16620980 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 633 278 254 0 0 chr2L 6392785 6392852 -16618692 + (CAGA)n Simple_repeat Simple_repeat 4 70 0 2 633 22 35 0 0 chr2L 6393747 6393776 -16617768 + AT_rich Low_complexity Low_complexity 1 29 0 2 633 23 0 0 0 chr2L 6393840 6393863 -16617681 + AT_rich Low_complexity Low_complexity 1 23 0 2 633 180 0 0 0 chr2L 6394520 6394540 -16617004 + (CGATG)n Simple_repeat Simple_repeat 1 20 0 2 633 33 73 0 0 chr2L 6394953 6395021 -16616523 + AT_rich Low_complexity Low_complexity 1 68 0 2 633 22 0 0 0 chr2L 6397339 6397361 -16614183 + AT_rich Low_complexity Low_complexity 1 22 0 2 633 201 171 0 0 chr2L 6398519 6398554 -16612990 + T-rich Low_complexity Low_complexity 1 35 0 2 633 282 194 0 0 chr2L 6402740 6402807 -16608737 + (CAAA)n Simple_repeat Simple_repeat 4 70 0 2 633 21 36 0 0 chr2L 6408600 6408628 -16602916 + AT_rich Low_complexity Low_complexity 1 28 0 2 633 30 0 0 0 chr2L 6410043 6410073 -16601471 + AT_rich Low_complexity Low_complexity 1 30 0 2 633 21 57 0 0 chr2L 6413124 6413159 -16598385 + AT_rich Low_complexity Low_complexity 1 35 0 2 634 23 0 0 0 chr2L 6426386 6426409 -16585135 + AT_rich Low_complexity Low_complexity 1 23 0 2 634 4017 0 0 0 chr2L 6426910 6427338 -16584206 + ROO_LTR LTR Pao 1 428 0 2 634 38303 1 3 1 chr2L 6427338 6431563 -16579981 + ROO_I LTR Pao 1 4232 -4024 2 634 4017 0 0 0 chr2L 6431563 6431991 -16579553 - ROO_LTR LTR Pao 0 428 1 2 634 36564 1 0 0 chr2L 6431991 6436013 -16575531 - ROO_I LTR Pao 0 8256 4234 2 634 4001 2 0 0 chr2L 6436013 6436441 -16575103 + ROO_LTR LTR Pao 1 428 0 2 634 74610 1 2 0 chr2L 6436441 6444684 -16566860 + ROO_I LTR Pao 1 8256 0 2 634 4005 0 0 0 chr2L 6444684 6445112 -16566432 + ROO_LTR LTR Pao 1 428 0 2 634 41 66 0 0 chr2L 6448409 6448485 -16563059 + AT_rich Low_complexity Low_complexity 1 76 0 2 634 23 0 0 0 chr2L 6450350 6450373 -16561171 + AT_rich Low_complexity Low_complexity 1 23 0 2 634 25 83 0 0 chr2L 6453423 6453483 -16558061 + AT_rich Low_complexity Low_complexity 1 60 0 2 634 237 163 19 115 chr2L 6463316 6463420 -16548124 - ROO_I LTR Pao -7522 734 641 2 634 203 184 0 0 chr2L 6464875 6464913 -16546631 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 634 198 118 0 0 chr2L 6465130 6465164 -16546380 + (CACG)n Simple_repeat Simple_repeat 2 35 0 2 634 195 129 0 0 chr2L 6465277 6465308 -16546236 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 634 180 0 0 0 chr2L 6473435 6473455 -16538089 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 634 31 96 0 0 chr2L 6474002 6474096 -16537448 + AT_rich Low_complexity Low_complexity 1 94 0 2 634 22 0 0 0 chr2L 6474309 6474331 -16537213 + AT_rich Low_complexity Low_complexity 1 22 0 2 634 240 286 11 0 chr2L 6475098 6475189 -16536355 + (CTG)n Simple_repeat Simple_repeat 3 94 0 2 634 27 49 0 0 chr2L 6479172 6479213 -16532331 + AT_rich Low_complexity Low_complexity 1 41 0 2 634 278 321 0 0 chr2L 6483211 6483320 -16528224 + (CAG)n Simple_repeat Simple_repeat 3 111 0 2 634 360 281 19 38 chr2L 6483557 6483716 -16527828 + (CAG)n Simple_repeat Simple_repeat 1 156 0 2 634 33 0 0 0 chr2L 6490918 6490951 -16520593 + AT_rich Low_complexity Low_complexity 1 33 0 2 634 187 175 35 0 chr2L 6495462 6495519 -16516025 + (CAG)n Simple_repeat Simple_repeat 3 61 0 2 634 29 78 0 0 chr2L 6496887 6496951 -16514593 + AT_rich Low_complexity Low_complexity 1 64 0 2 634 191 61 0 29 chr2L 6498891 6498925 -16512619 + (CAG)n Simple_repeat Simple_repeat 3 35 0 2 634 189 0 0 0 chr2L 6503161 6503182 -16508362 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 634 23 0 0 0 chr2L 6503632 6503655 -16507889 + AT_rich Low_complexity Low_complexity 1 23 0 2 634 25 0 0 0 chr2L 6505189 6505214 -16506330 + AT_rich Low_complexity Low_complexity 1 25 0 2 634 183 42 0 0 chr2L 6507142 6507166 -16504378 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 634 183 162 0 0 chr2L 6508592 6508629 -16502915 + A-rich Low_complexity Low_complexity 1 37 0 2 634 180 77 0 0 chr2L 6509752 6509778 -16501766 + (TCC)n Simple_repeat Simple_repeat 2 27 0 2 634 39 74 0 0 chr2L 6512744 6512825 -16498719 + AT_rich Low_complexity Low_complexity 1 81 0 2 634 237 65 0 0 chr2L 6517509 6517540 -16494004 + (CACCAT)n Simple_repeat Simple_repeat 2 32 0 2 634 700 289 116 35 chr2L 6517913 6519440 -16492104 - SAR_DM Satellite Satellite -610 1649 1 2 634 377 302 22 0 chr2L 6519358 6519497 -16492047 + XDMR Unknown Unknown 1 142 -219 2 634 23 0 0 0 chr2L 6521688 6521711 -16489833 + AT_rich Low_complexity Low_complexity 1 23 0 2 634 22 35 0 0 chr2L 6527501 6527530 -16484014 + AT_rich Low_complexity Low_complexity 1 29 0 2 634 22 0 0 0 chr2L 6527935 6527957 -16483587 + AT_rich Low_complexity Low_complexity 1 22 0 2 634 273 157 0 0 chr2L 6530244 6530314 -16481230 - ROO_I LTR Pao -7526 730 661 2 634 27 0 0 0 chr2L 6532870 6532897 -16478647 + AT_rich Low_complexity Low_complexity 1 27 0 2 634 192 97 0 0 chr2L 6533671 6533702 -16477842 + (A)n Simple_repeat Simple_repeat 1 31 0 2 634 22 35 0 0 chr2L 6542601 6542630 -16468914 + AT_rich Low_complexity Low_complexity 1 29 0 2 634 248 0 0 30 chr2L 6544416 6544449 -16467095 + (TATAA)n Simple_repeat Simple_repeat 3 34 0 2 634 210 91 0 0 chr2L 6545338 6545371 -16466173 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 634 26 0 0 0 chr2L 6548559 6548585 -16462959 + AT_rich Low_complexity Low_complexity 1 26 0 2 634 21 0 0 0 chr2L 6551767 6551788 -16459756 + AT_rich Low_complexity Low_complexity 1 21 0 2 634 359 178 10 0 chr2L 6552899 6553000 -16458544 + (TTG)n Simple_repeat Simple_repeat 3 104 0 2 634 22 35 0 0 chr2L 6553159 6553188 -16458356 + AT_rich Low_complexity Low_complexity 1 29 0 2 635 207 0 0 0 chr2L 6555719 6555742 -16455802 + (TA)n Simple_repeat Simple_repeat 2 24 0 2 635 21 71 0 0 chr2L 6566416 6566458 -16445086 + AT_rich Low_complexity Low_complexity 1 42 0 2 635 23 33 0 0 chr2L 6568520 6568550 -16442994 + AT_rich Low_complexity Low_complexity 1 30 0 2 635 353 22 22 0 chr2L 6569188 6569234 -16442310 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 635 22 56 0 0 chr2L 6569357 6569393 -16442151 + AT_rich Low_complexity Low_complexity 1 36 0 2 635 222 231 0 15 chr2L 6572038 6572104 -16439440 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 635 189 0 0 0 chr2L 6572219 6572240 -16439304 + (CTG)n Simple_repeat Simple_repeat 2 22 0 2 635 192 97 0 0 chr2L 6572725 6572756 -16438788 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 635 22 0 0 0 chr2L 6573367 6573389 -16438155 + AT_rich Low_complexity Low_complexity 1 22 0 2 635 21 0 0 0 chr2L 6573935 6573956 -16437588 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 23 0 0 0 chr2L 6575520 6575543 -16436001 + AT_rich Low_complexity Low_complexity 1 23 0 2 635 21 0 0 0 chr2L 6577884 6577905 -16433639 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 192 186 0 0 chr2L 6579422 6579481 -16432063 + (CAGA)n Simple_repeat Simple_repeat 4 62 0 2 635 25 65 0 0 chr2L 6582231 6582277 -16429267 + AT_rich Low_complexity Low_complexity 1 46 0 2 635 288 102 0 0 chr2L 6583065 6583114 -16428430 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 635 195 139 0 0 chr2L 6583418 6583454 -16428090 + (GA)n Simple_repeat Simple_repeat 2 37 0 2 635 244 206 30 40 chr2L 6587225 6587326 -16424218 + (TTG)n Simple_repeat Simple_repeat 3 102 0 2 635 21 36 0 0 chr2L 6587996 6588024 -16423520 + AT_rich Low_complexity Low_complexity 1 28 0 2 635 25 0 0 0 chr2L 6589984 6590009 -16421535 + AT_rich Low_complexity Low_complexity 1 25 0 2 635 200 217 0 21 chr2L 6590809 6590856 -16420688 + (TTTCG)n Simple_repeat Simple_repeat 3 48 0 2 635 281 131 0 16 chr2L 6594327 6594389 -16417155 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 635 27 62 0 0 chr2L 6595196 6595244 -16416300 + AT_rich Low_complexity Low_complexity 1 48 0 2 635 30 0 0 0 chr2L 6596895 6596925 -16414619 + AT_rich Low_complexity Low_complexity 1 30 0 2 635 200 97 32 0 chr2L 6598822 6598853 -16412691 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 635 21 0 0 0 chr2L 6599291 6599312 -16412232 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 234 91 0 0 chr2L 6600476 6600509 -16411035 + (TGAG)n Simple_repeat Simple_repeat 4 36 0 2 635 240 86 0 0 chr2L 6601850 6601885 -16409659 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 635 191 125 0 24 chr2L 6609424 6609465 -16402079 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 2 635 200 139 0 27 chr2L 6611305 6611342 -16400202 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 635 180 0 0 0 chr2L 6611622 6611642 -16399902 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 635 22 0 0 0 chr2L 6612080 6612102 -16399442 + AT_rich Low_complexity Low_complexity 1 22 0 2 635 25 31 0 0 chr2L 6612194 6612226 -16399318 + AT_rich Low_complexity Low_complexity 1 32 0 2 635 32 0 0 0 chr2L 6614040 6614072 -16397472 + AT_rich Low_complexity Low_complexity 1 32 0 2 635 22 56 0 0 chr2L 6619962 6619998 -16391546 + AT_rich Low_complexity Low_complexity 1 36 0 2 635 28 0 0 0 chr2L 6622620 6622648 -16388896 + AT_rich Low_complexity Low_complexity 1 28 0 2 635 31 0 0 0 chr2L 6625796 6625827 -16385717 + AT_rich Low_complexity Low_complexity 1 31 0 2 635 37 23 0 0 chr2L 6631881 6631925 -16379619 + AT_rich Low_complexity Low_complexity 1 44 0 2 635 206 200 0 0 chr2L 6633376 6633432 -16378112 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 635 23 0 0 0 chr2L 6634470 6634493 -16377051 + AT_rich Low_complexity Low_complexity 1 23 0 2 635 22 0 0 0 chr2L 6635428 6635450 -16376094 + AT_rich Low_complexity Low_complexity 1 22 0 2 635 247 284 0 0 chr2L 6639212 6639279 -16372265 + (TTG)n Simple_repeat Simple_repeat 2 68 0 2 635 23 0 0 0 chr2L 6641230 6641253 -16370291 + AT_rich Low_complexity Low_complexity 1 23 0 2 635 180 0 0 0 chr2L 6642409 6642429 -16369115 + (T)n Simple_repeat Simple_repeat 1 20 0 2 635 223 290 0 31 chr2L 6644659 6644755 -16366789 + A-rich Low_complexity Low_complexity 3 95 0 2 635 24 0 0 0 chr2L 6645930 6645954 -16365590 + AT_rich Low_complexity Low_complexity 1 24 0 2 635 234 206 0 0 chr2L 6646569 6646632 -16364912 + (TTG)n Simple_repeat Simple_repeat 3 65 0 2 635 200 59 0 29 chr2L 6646759 6646794 -16364750 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 635 222 200 0 0 chr2L 6654075 6654120 -16357424 + (CGA)n Simple_repeat Simple_repeat 2 46 0 2 635 34 0 0 0 chr2L 6654756 6654790 -16356754 + AT_rich Low_complexity Low_complexity 1 34 0 2 635 22 56 0 0 chr2L 6664646 6664682 -16346862 + AT_rich Low_complexity Low_complexity 1 36 0 2 635 239 88 0 136 chr2L 6669541 6669607 -16341937 + ROO_I LTR Pao 676 732 -7524 2 635 213 65 0 0 chr2L 6669864 6669895 -16341649 + (CAG)n Simple_repeat Simple_repeat 1 31 0 2 635 22 56 0 0 chr2L 6671072 6671108 -16340436 + AT_rich Low_complexity Low_complexity 1 36 0 2 635 29 47 0 0 chr2L 6677812 6677855 -16333689 + AT_rich Low_complexity Low_complexity 1 43 0 2 635 183 129 0 0 chr2L 6679416 6679447 -16332097 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 2 79 26 0 0 0 chr2L 6684655 6684681 -16326863 + AT_rich Low_complexity Low_complexity 1 26 0 2 636 210 194 0 0 chr2L 6691151 6691213 -16320331 + (GGATG)n Simple_repeat Simple_repeat 4 65 0 2 636 221 328 0 0 chr2L 6693647 6693711 -16317833 + (CCCCAA)n Simple_repeat Simple_repeat 1 64 0 2 636 23 0 0 0 chr2L 6698589 6698612 -16312932 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 21 36 0 0 chr2L 6702077 6702105 -16309439 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 21 36 0 0 chr2L 6707179 6707207 -16304337 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 21 0 0 0 chr2L 6709420 6709441 -16302103 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 25 65 0 0 chr2L 6709465 6709511 -16302033 + AT_rich Low_complexity Low_complexity 1 46 0 2 636 25 51 0 0 chr2L 6711318 6711357 -16300187 + AT_rich Low_complexity Low_complexity 1 39 0 2 636 22 35 0 0 chr2L 6715008 6715037 -16296507 + AT_rich Low_complexity Low_complexity 1 29 0 2 636 213 308 0 0 chr2L 6718188 6718279 -16293265 + (ATG)n Simple_repeat Simple_repeat 3 93 0 2 636 233 109 22 0 chr2L 6719395 6719441 -16292103 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2 636 34 24 0 0 chr2L 6719671 6719712 -16291832 + AT_rich Low_complexity Low_complexity 1 41 0 2 636 23 0 0 0 chr2L 6719888 6719911 -16291633 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 242 216 0 0 chr2L 6722937 6722988 -16288556 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 636 208 292 0 0 chr2L 6723006 6723054 -16288490 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 636 210 271 14 28 chr2L 6724328 6724400 -16287144 + (CGTG)n Simple_repeat Simple_repeat 1 71 0 2 636 21 36 0 0 chr2L 6731117 6731145 -16280399 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 37 23 0 0 chr2L 6732192 6732236 -16279308 + AT_rich Low_complexity Low_complexity 1 44 0 2 636 21 0 0 0 chr2L 6735521 6735542 -16276002 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 28 48 0 0 chr2L 6735905 6735947 -16275597 + AT_rich Low_complexity Low_complexity 1 42 0 2 636 22 0 0 0 chr2L 6742221 6742243 -16269301 + AT_rich Low_complexity Low_complexity 1 22 0 2 636 22 56 0 0 chr2L 6742289 6742325 -16269219 + AT_rich Low_complexity Low_complexity 1 36 0 2 636 197 33 33 0 chr2L 6745558 6745588 -16265956 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 636 26 30 0 0 chr2L 6745915 6745948 -16265596 + AT_rich Low_complexity Low_complexity 1 33 0 2 636 27 0 0 0 chr2L 6747439 6747466 -16264078 + AT_rich Low_complexity Low_complexity 1 27 0 2 636 23 0 0 0 chr2L 6748210 6748233 -16263311 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 21 0 0 0 chr2L 6750123 6750144 -16261400 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 258 105 0 0 chr2L 6751289 6751327 -16260217 + (TGGG)n Simple_repeat Simple_repeat 1 38 0 2 636 23 0 0 0 chr2L 6751506 6751529 -16260015 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 30 0 0 0 chr2L 6752547 6752577 -16258967 + AT_rich Low_complexity Low_complexity 1 30 0 2 636 189 74 0 0 chr2L 6753250 6753277 -16258267 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 2 636 204 97 0 0 chr2L 6753294 6753325 -16258219 + (CAGCC)n Simple_repeat Simple_repeat 1 31 0 2 636 237 246 0 0 chr2L 6753989 6754046 -16257498 + (CAA)n Simple_repeat Simple_repeat 2 58 0 2 636 189 74 0 0 chr2L 6755679 6755706 -16255838 + (A)n Simple_repeat Simple_repeat 1 27 0 2 636 213 121 0 0 chr2L 6756704 6756737 -16254807 + (ATTCG)n Simple_repeat Simple_repeat 4 36 0 2 636 229 200 22 0 chr2L 6769149 6769194 -16242350 + GA-rich Low_complexity Low_complexity 1 46 0 2 636 183 100 0 0 chr2L 6769202 6769232 -16242312 + (CGAGA)n Simple_repeat Simple_repeat 4 33 0 2 636 30 0 0 0 chr2L 6770735 6770765 -16240779 + AT_rich Low_complexity Low_complexity 1 30 0 2 636 453 50 0 0 chr2L 6772618 6772678 -16238866 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 636 221 250 0 14 chr2L 6777158 6777227 -16234317 + (CAG)n Simple_repeat Simple_repeat 2 69 0 2 636 31 0 0 0 chr2L 6778444 6778475 -16233069 + AT_rich Low_complexity Low_complexity 1 31 0 2 636 21 0 0 0 chr2L 6778643 6778664 -16232880 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 211 183 27 40 chr2L 6778956 6779030 -16232514 + (TAA)n Simple_repeat Simple_repeat 2 74 0 2 636 210 150 0 0 chr2L 6779211 6779251 -16232293 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 636 252 309 0 0 chr2L 6783248 6783316 -16228228 + C-rich Low_complexity Low_complexity 1 68 0 2 636 297 118 0 0 chr2L 6783420 6783471 -16228073 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 636 21 36 0 0 chr2L 6783996 6784024 -16227520 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 189 74 0 0 chr2L 6792204 6792231 -16219313 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 636 21 36 0 0 chr2L 6792484 6792512 -16219032 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 220 120 0 57 chr2L 6792596 6792649 -16218895 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 2 636 27 29 0 0 chr2L 6793454 6793488 -16218056 + AT_rich Low_complexity Low_complexity 1 34 0 2 636 456 86 0 0 chr2L 6794142 6794212 -16217332 + (CAA)n Simple_repeat Simple_repeat 2 71 0 2 636 239 205 39 0 chr2L 6796928 6797006 -16214538 + (ATGGTG)n Simple_repeat Simple_repeat 3 83 0 2 636 207 0 0 0 chr2L 6797162 6797185 -16214359 + (ATG)n Simple_repeat Simple_repeat 1 23 0 2 636 22 0 0 0 chr2L 6798840 6798862 -16212682 + AT_rich Low_complexity Low_complexity 1 22 0 2 636 21 0 0 0 chr2L 6799952 6799973 -16211571 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 24 32 0 0 chr2L 6801170 6801201 -16210343 + AT_rich Low_complexity Low_complexity 1 31 0 2 636 192 234 0 0 chr2L 6801977 6802024 -16209520 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 2 636 201 74 0 0 chr2L 6806373 6806400 -16205144 + (A)n Simple_repeat Simple_repeat 1 27 0 2 636 24 32 0 0 chr2L 6808293 6808324 -16203220 + AT_rich Low_complexity Low_complexity 1 31 0 2 636 21 36 0 0 chr2L 6809406 6809434 -16202110 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 259 150 16 16 chr2L 6812392 6812453 -16199091 + (ATGGTG)n Simple_repeat Simple_repeat 5 65 0 2 636 225 0 0 0 chr2L 6813596 6813621 -16197923 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 2 637 220 179 0 0 chr2L 6816480 6816519 -16195025 + (GCTG)n Simple_repeat Simple_repeat 2 40 0 2 637 342 134 0 0 chr2L 6822159 6822226 -16189318 + (CAG)n Simple_repeat Simple_repeat 3 69 0 2 637 226 50 24 24 chr2L 6822355 6822396 -16189148 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 637 26 30 0 0 chr2L 6823491 6823524 -16188020 + AT_rich Low_complexity Low_complexity 1 33 0 2 637 273 29 0 0 chr2L 6824059 6824093 -16187451 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 637 186 43 0 0 chr2L 6824241 6824264 -16187280 + (CAGTC)n Simple_repeat Simple_repeat 1 23 0 2 637 260 127 18 0 chr2L 6824786 6824841 -16186703 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 637 255 379 23 0 chr2L 6827680 6827812 -16183732 + (CCCGAA)n Simple_repeat Simple_repeat 6 140 0 2 637 183 80 0 0 chr2L 6829593 6829618 -16181926 + (CAG)n Simple_repeat Simple_repeat 3 27 0 2 637 21 36 0 0 chr2L 6831138 6831166 -16180378 + AT_rich Low_complexity Low_complexity 1 28 0 2 637 225 94 0 0 chr2L 6831921 6831953 -16179591 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 637 189 147 0 0 chr2L 6832234 6832268 -16179276 + (CGG)n Simple_repeat Simple_repeat 1 34 0 2 637 208 273 0 0 chr2L 6836400 6836455 -16175089 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 637 202 159 0 45 chr2L 6837970 6838036 -16173508 + (CGG)n Simple_repeat Simple_repeat 1 63 0 2 637 23 54 0 0 chr2L 6838789 6838826 -16172718 + AT_rich Low_complexity Low_complexity 1 37 0 2 637 198 0 0 0 chr2L 6838854 6838876 -16172668 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 637 29 0 0 0 chr2L 6839464 6839493 -16172051 + AT_rich Low_complexity Low_complexity 1 29 0 2 637 24 32 0 0 chr2L 6843089 6843120 -16168424 + AT_rich Low_complexity Low_complexity 1 31 0 2 637 21 36 0 0 chr2L 6845454 6845482 -16166062 + AT_rich Low_complexity Low_complexity 1 28 0 2 637 33 25 0 0 chr2L 6847251 6847291 -16164253 + AT_rich Low_complexity Low_complexity 1 40 0 2 637 21 0 0 0 chr2L 6848777 6848798 -16162746 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 323 0 86 17 chr2L 6851657 6851715 -16159829 + (TATAA)n Simple_repeat Simple_repeat 3 64 0 2 637 22 0 0 0 chr2L 6853987 6854009 -16157535 + AT_rich Low_complexity Low_complexity 1 22 0 2 637 32 43 0 0 chr2L 6855794 6855840 -16155704 + AT_rich Low_complexity Low_complexity 1 46 0 2 637 24 0 0 0 chr2L 6863383 6863407 -16148137 + AT_rich Low_complexity Low_complexity 1 24 0 2 637 183 186 0 0 chr2L 6864559 6864602 -16146942 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 637 36 62 0 0 chr2L 6865092 6865156 -16146388 + AT_rich Low_complexity Low_complexity 1 64 0 2 637 27 0 0 0 chr2L 6865734 6865761 -16145783 + GC_rich Low_complexity Low_complexity 1 27 0 2 637 183 42 0 0 chr2L 6866305 6866329 -16145215 + (T)n Simple_repeat Simple_repeat 1 24 0 2 637 279 157 0 0 chr2L 6870493 6870544 -16141000 + (CTCA)n Simple_repeat Simple_repeat 2 52 0 2 637 225 0 0 0 chr2L 6872089 6872114 -16139430 + (CATA)n Simple_repeat Simple_repeat 1 25 0 2 637 317 93 19 0 chr2L 6872232 6872286 -16139258 + (GCTG)n Simple_repeat Simple_repeat 4 58 0 2 637 24 32 0 0 chr2L 6872676 6872707 -16138837 + AT_rich Low_complexity Low_complexity 1 31 0 2 637 30 83 0 0 chr2L 6873728 6873800 -16137744 + AT_rich Low_complexity Low_complexity 1 72 0 2 637 24 32 0 0 chr2L 6874701 6874732 -16136812 + AT_rich Low_complexity Low_complexity 1 31 0 2 637 206 121 30 0 chr2L 6875174 6875207 -16136337 + (CACG)n Simple_repeat Simple_repeat 4 37 0 2 637 2053 5 0 0 chr2L 6876831 6877055 -16134489 + DIVER_LTR LTR Pao 1 224 0 2 637 52742 2 0 0 chr2L 6877076 6882719 -16128825 + DIVER_I LTR Pao 1 5643 0 2 637 2053 5 0 0 chr2L 6882719 6882943 -16128601 + DIVER_LTR LTR Pao 1 224 0 2 637 220 120 20 20 chr2L 6883540 6883591 -16127953 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 637 23 33 0 0 chr2L 6884837 6884867 -16126677 + AT_rich Low_complexity Low_complexity 1 30 0 2 637 215 237 17 0 chr2L 6885298 6885357 -16126187 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 637 224 304 25 0 chr2L 6887962 6888041 -16123503 + (GAATG)n Simple_repeat Simple_repeat 5 85 0 2 637 22 35 0 0 chr2L 6888860 6888889 -16122655 + AT_rich Low_complexity Low_complexity 1 29 0 2 637 21 0 0 0 chr2L 6888963 6888984 -16122560 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 213 65 0 0 chr2L 6889370 6889401 -16122143 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 637 243 157 0 0 chr2L 6896250 6896301 -16115243 + (CTGGGG)n Simple_repeat Simple_repeat 1 51 0 2 637 273 119 0 0 chr2L 6899434 6899476 -16112068 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 637 23 0 0 0 chr2L 6900834 6900857 -16110687 + AT_rich Low_complexity Low_complexity 1 23 0 2 637 231 114 0 0 chr2L 6905854 6905889 -16105655 + (CAG)n Simple_repeat Simple_repeat 1 35 0 2 637 224 352 0 0 chr2L 6916175 6916303 -16095241 + CT-rich Low_complexity Low_complexity 2 129 0 2 637 236 77 0 25 chr2L 6916988 6917028 -16094516 + (TTC)n Simple_repeat Simple_repeat 3 41 0 2 637 33 0 0 0 chr2L 6919030 6919063 -16092481 + AT_rich Low_complexity Low_complexity 1 33 0 2 637 229 211 34 34 chr2L 6919369 6919428 -16092116 + (CATG)n Simple_repeat Simple_repeat 4 62 0 2 637 240 122 0 0 chr2L 6919643 6919684 -16091860 + (CCA)n Simple_repeat Simple_repeat 2 42 0 2 637 22 56 0 0 chr2L 6920488 6920524 -16091020 + AT_rich Low_complexity Low_complexity 1 36 0 2 637 180 0 0 0 chr2L 6922157 6922177 -16089367 + (CAA)n Simple_repeat Simple_repeat 3 22 0 2 637 231 208 14 27 chr2L 6926723 6926797 -16084747 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 637 206 265 0 0 chr2L 6926796 6926845 -16084699 + A-rich Low_complexity Low_complexity 1 49 0 2 637 244 179 0 43 chr2L 6927173 6927243 -16084301 + GA-rich Low_complexity Low_complexity 3 69 0 2 637 237 33 0 0 chr2L 6928748 6928778 -16082766 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 637 280 288 0 0 chr2L 6930122 6930233 -16081311 + A-rich Low_complexity Low_complexity 1 111 0 2 637 23 0 0 0 chr2L 6931163 6931186 -16080358 + AT_rich Low_complexity Low_complexity 1 23 0 2 637 213 139 0 0 chr2L 6931447 6931490 -16080054 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 637 208 220 0 0 chr2L 6939952 6940002 -16071542 + GA-rich Low_complexity Low_complexity 1 50 0 2 637 26 64 0 0 chr2L 6941034 6941081 -16070463 + AT_rich Low_complexity Low_complexity 1 47 0 2 637 22 0 0 0 chr2L 6943183 6943205 -16068339 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 43 47 0 0 chr2L 6948964 6949028 -16062516 + AT_rich Low_complexity Low_complexity 1 64 0 2 638 31 68 0 0 chr2L 6949294 6949353 -16062191 + AT_rich Low_complexity Low_complexity 1 59 0 2 638 240 59 0 0 chr2L 6950259 6950293 -16061251 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 2 638 22 0 0 0 chr2L 6950305 6950327 -16061217 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 22 35 0 0 chr2L 6950466 6950495 -16061049 + AT_rich Low_complexity Low_complexity 1 29 0 2 638 209 171 0 0 chr2L 6954391 6954426 -16057118 + GA-rich Low_complexity Low_complexity 2 36 0 2 638 21 0 0 0 chr2L 6956268 6956289 -16055255 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 37 62 0 0 chr2L 6959059 6959124 -16052420 + AT_rich Low_complexity Low_complexity 1 65 0 2 638 21 0 0 0 chr2L 6960518 6960539 -16051005 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 25 0 0 0 chr2L 6964234 6964259 -16047285 + AT_rich Low_complexity Low_complexity 1 25 0 2 638 189 0 0 0 chr2L 6966163 6966184 -16045360 + (CATATA)n Simple_repeat Simple_repeat 6 26 0 2 638 222 186 34 0 chr2L 6966924 6966983 -16044561 + T-rich Low_complexity Low_complexity 3 63 0 2 638 346 98 0 0 chr2L 6967535 6967586 -16043958 - MDG1_I LTR Gypsy -6518 78 28 2 638 22 70 0 0 chr2L 6967844 6967887 -16043657 + AT_rich Low_complexity Low_complexity 1 43 0 2 638 23 101 0 0 chr2L 6972843 6972922 -16038622 + AT_rich Low_complexity Low_complexity 1 79 0 2 638 205 191 0 0 chr2L 6972999 6973041 -16038503 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 638 23 54 0 0 chr2L 6988407 6988444 -16023100 + AT_rich Low_complexity Low_complexity 1 37 0 2 638 188 35 35 0 chr2L 6991457 6991486 -16020058 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 638 2358 8 0 0 chr2L 6991486 6991752 -16019792 - DMLTR5 LTR Gypsy 0 266 1 2 638 49189 1 0 0 chr2L 6991752 6997313 -16014231 - HMSBEAGLE_I LTR Gypsy 0 6529 969 2 638 974 29 52 12 chr2L 6997313 6997485 -16014059 + (TAA)n Simple_repeat Simple_repeat 1 179 0 2 638 6671 2 0 5 chr2L 6997485 6998283 -16013261 - HMSBEAGLE_I LTR Gypsy -5733 796 1 2 638 2358 8 0 0 chr2L 6998282 6998548 -16012996 - DMLTR5 LTR Gypsy 0 266 1 2 638 26 50 0 0 chr2L 7000985 7001025 -16010519 + AT_rich Low_complexity Low_complexity 1 40 0 2 638 23 33 0 0 chr2L 7001360 7001390 -16010154 + AT_rich Low_complexity Low_complexity 1 30 0 2 638 21 36 0 0 chr2L 7002138 7002166 -16009378 + AT_rich Low_complexity Low_complexity 1 28 0 2 638 23 78 0 0 chr2L 7002290 7002341 -16009203 + AT_rich Low_complexity Low_complexity 1 51 0 2 638 195 42 0 0 chr2L 7010231 7010255 -16001289 + (CTCA)n Simple_repeat Simple_repeat 3 26 0 2 638 21 0 0 0 chr2L 7012903 7012924 -15998620 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 21 57 0 0 chr2L 7014885 7014920 -15996624 + AT_rich Low_complexity Low_complexity 1 35 0 2 638 26 0 0 0 chr2L 7025059 7025085 -15986459 + AT_rich Low_complexity Low_complexity 1 26 0 2 638 327 137 0 0 chr2L 7025267 7025340 -15986204 + (CTG)n Simple_repeat Simple_repeat 1 73 0 2 638 242 232 0 0 chr2L 7025512 7025581 -15985963 - ROO_I LTR Pao -7551 705 637 2 638 21 57 0 0 chr2L 7025922 7025957 -15985587 + AT_rich Low_complexity Low_complexity 1 35 0 2 638 198 0 0 0 chr2L 7033238 7033260 -15978284 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 638 222 62 0 0 chr2L 7034118 7034150 -15977394 + (A)n Simple_repeat Simple_repeat 1 32 0 2 638 180 0 0 0 chr2L 7035120 7035140 -15976404 + (A)n Simple_repeat Simple_repeat 1 20 0 2 638 211 346 0 27 chr2L 7035418 7035528 -15976016 + (CGG)n Simple_repeat Simple_repeat 2 108 0 2 638 27 73 0 0 chr2L 7037560 7037615 -15973929 + AT_rich Low_complexity Low_complexity 1 55 0 2 638 23 0 0 0 chr2L 7041920 7041943 -15969601 + AT_rich Low_complexity Low_complexity 1 23 0 2 638 21 0 0 0 chr2L 7045348 7045369 -15966175 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 210 37 0 0 chr2L 7046070 7046097 -15965447 + (ATGGTG)n Simple_repeat Simple_repeat 6 32 0 2 638 22 35 0 0 chr2L 7048478 7048507 -15963037 + AT_rich Low_complexity Low_complexity 1 29 0 2 638 228 256 49 0 chr2L 7049843 7049925 -15961619 - ROO_I LTR Pao -7557 699 614 2 638 196 143 18 18 chr2L 7053746 7053803 -15957741 + (CAG)n Simple_repeat Simple_repeat 1 57 0 2 638 21 36 0 0 chr2L 7055947 7055975 -15955569 + AT_rich Low_complexity Low_complexity 1 28 0 2 638 220 229 0 20 chr2L 7056727 7056776 -15954768 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 638 247 167 62 0 chr2L 7056809 7056857 -15954687 - Gypsy11_I LTR Gypsy -2965 559 509 2 638 23 0 0 0 chr2L 7060937 7060960 -15950584 + AT_rich Low_complexity Low_complexity 1 23 0 2 638 324 102 0 0 chr2L 7061125 7061174 -15950370 + (CAA)n Simple_repeat Simple_repeat 3 51 0 2 638 180 111 0 0 chr2L 7064100 7064127 -15947417 + (GGAGAA)n Simple_repeat Simple_repeat 5 31 0 2 638 1771 276 51 54 chr2L 7066083 7067682 -15943862 - SAR_DM Satellite Satellite -218 1593 1 2 638 21 0 0 0 chr2L 7069948 7069969 -15941575 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 24 67 0 0 chr2L 7074863 7074908 -15936636 + AT_rich Low_complexity Low_complexity 1 45 0 2 638 24 0 0 0 chr2L 7075825 7075849 -15935695 + AT_rich Low_complexity Low_complexity 1 24 0 2 638 29 0 0 0 chr2L 7076486 7076515 -15935029 + AT_rich Low_complexity Low_complexity 1 29 0 2 639 274 125 0 0 chr2L 7081395 7081435 -15930109 - DMRP1 Unknown Unknown -47 299 260 2 639 596 108 156 16 chr2L 7081416 7081538 -15930006 - DMRP1 Unknown Unknown -206 140 2 2 639 26 30 0 0 chr2L 7083920 7083953 -15927591 + AT_rich Low_complexity Low_complexity 1 33 0 2 639 303 122 0 0 chr2L 7087611 7087660 -15923884 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 639 21 0 0 0 chr2L 7088354 7088375 -15923169 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 748 146 246 0 chr2L 7088616 7088787 -15922757 - DNAREP1_DM LINE Penelope -2 592 380 2 639 346 265 19 10 chr2L 7088800 7088903 -15922641 - DNAREP1_DM LINE Penelope -490 104 1 2 639 34 24 0 0 chr2L 7091082 7091123 -15920421 + AT_rich Low_complexity Low_complexity 1 41 0 2 639 23 0 0 0 chr2L 7096074 7096097 -15915447 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 301 269 0 0 chr2L 7096485 7096563 -15914981 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 639 186 103 0 0 chr2L 7096640 7096669 -15914875 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 639 24 32 0 0 chr2L 7099333 7099364 -15912180 + AT_rich Low_complexity Low_complexity 1 31 0 2 639 34 24 0 0 chr2L 7104828 7104869 -15906675 + AT_rich Low_complexity Low_complexity 1 41 0 2 639 21 0 0 0 chr2L 7107064 7107085 -15904459 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 198 0 0 0 chr2L 7108368 7108390 -15903154 + (A)n Simple_repeat Simple_repeat 1 22 0 2 639 354 107 0 0 chr2L 7110907 7110963 -15900581 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 639 31 26 0 0 chr2L 7111872 7111910 -15899634 + AT_rich Low_complexity Low_complexity 1 38 0 2 639 28 0 0 0 chr2L 7117956 7117984 -15893560 + AT_rich Low_complexity Low_complexity 1 28 0 2 639 22 0 0 0 chr2L 7122815 7122837 -15888707 + AT_rich Low_complexity Low_complexity 1 22 0 2 639 25 51 0 0 chr2L 7123448 7123487 -15888057 + AT_rich Low_complexity Low_complexity 1 39 0 2 639 25 51 0 0 chr2L 7125820 7125859 -15885685 + AT_rich Low_complexity Low_complexity 1 39 0 2 639 215 227 0 0 chr2L 7126772 7126816 -15884728 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 2 639 22 56 0 0 chr2L 7127081 7127117 -15884427 + AT_rich Low_complexity Low_complexity 1 36 0 2 639 21 36 0 0 chr2L 7132399 7132427 -15879117 + AT_rich Low_complexity Low_complexity 1 28 0 2 639 280 305 0 12 chr2L 7132757 7132882 -15878662 + (TTG)n Simple_repeat Simple_repeat 1 123 0 2 639 195 190 0 0 chr2L 7133104 7133162 -15878382 + (CTG)n Simple_repeat Simple_repeat 3 60 0 2 639 28 29 0 0 chr2L 7134527 7134562 -15876982 + AT_rich Low_complexity Low_complexity 1 35 0 2 639 24 67 0 0 chr2L 7135848 7135893 -15875651 + AT_rich Low_complexity Low_complexity 1 45 0 2 639 32 0 0 0 chr2L 7140115 7140147 -15871397 + AT_rich Low_complexity Low_complexity 1 32 0 2 639 210 37 0 0 chr2L 7142133 7142160 -15869384 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 639 207 167 0 0 chr2L 7144626 7144668 -15866876 + (CTG)n Simple_repeat Simple_repeat 1 42 0 2 639 33 43 0 0 chr2L 7145116 7145163 -15866381 + AT_rich Low_complexity Low_complexity 1 47 0 2 639 21 0 0 0 chr2L 7145514 7145535 -15866009 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 23 0 0 0 chr2L 7146101 7146124 -15865420 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 49 32 0 0 chr2L 7150948 7151011 -15860533 + AT_rich Low_complexity Low_complexity 1 63 0 2 639 221 283 0 0 chr2L 7156051 7156111 -15855433 + (TCG)n Simple_repeat Simple_repeat 1 60 0 2 639 25 0 0 0 chr2L 7158053 7158078 -15853466 + AT_rich Low_complexity Low_complexity 1 25 0 2 639 59 38 0 0 chr2L 7159752 7159832 -15851712 + AT_rich Low_complexity Low_complexity 1 80 0 2 639 21 0 0 0 chr2L 7162560 7162581 -15848963 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 21 0 0 0 chr2L 7162819 7162840 -15848704 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 25 0 0 0 chr2L 7163500 7163525 -15848019 + AT_rich Low_complexity Low_complexity 1 25 0 2 639 26 50 0 0 chr2L 7164625 7164665 -15846879 + AT_rich Low_complexity Low_complexity 1 40 0 2 639 273 75 0 0 chr2L 7166780 7166820 -15844724 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 639 24 77 0 0 chr2L 7167263 7167315 -15844229 + AT_rich Low_complexity Low_complexity 1 52 0 2 639 32 57 0 0 chr2L 7171884 7171937 -15839607 + AT_rich Low_complexity Low_complexity 1 53 0 2 639 348 102 34 0 chr2L 7172703 7172762 -15838782 + DNAREP1_DM LINE Penelope 532 592 -2 2 639 21 82 0 0 chr2L 7175030 7175079 -15836465 + AT_rich Low_complexity Low_complexity 1 49 0 2 639 24 32 0 0 chr2L 7175149 7175180 -15836364 + AT_rich Low_complexity Low_complexity 1 31 0 2 639 577 106 236 0 chr2L 7175926 7176049 -15835495 - DMRP1 Unknown Unknown -193 153 2 2 639 30 0 0 0 chr2L 7180496 7180526 -15831018 + AT_rich Low_complexity Low_complexity 1 30 0 2 639 22 35 0 0 chr2L 7182117 7182146 -15829398 + AT_rich Low_complexity Low_complexity 1 29 0 2 639 36 0 0 0 chr2L 7185491 7185527 -15826017 + AT_rich Low_complexity Low_complexity 1 36 0 2 639 261 239 0 27 chr2L 7188407 7188480 -15823064 + (CAA)n Simple_repeat Simple_repeat 3 73 0 2 639 207 246 0 32 chr2L 7188995 7189058 -15822486 + T-rich Low_complexity Low_complexity 6 66 0 2 639 37 23 0 0 chr2L 7189355 7189399 -15822145 + AT_rich Low_complexity Low_complexity 1 44 0 2 639 204 67 0 0 chr2L 7189722 7189752 -15821792 + (T)n Simple_repeat Simple_repeat 1 30 0 2 639 23 0 0 0 chr2L 7190153 7190176 -15821368 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 23 0 0 0 chr2L 7190366 7190389 -15821155 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 22 0 0 0 chr2L 7193774 7193796 -15817748 + AT_rich Low_complexity Low_complexity 1 22 0 2 639 26 50 0 0 chr2L 7194825 7194865 -15816679 + AT_rich Low_complexity Low_complexity 1 40 0 2 639 240 111 0 0 chr2L 7196476 7196512 -15815032 + (TTA)n Simple_repeat Simple_repeat 2 37 0 2 639 276 200 0 0 chr2L 7196546 7196611 -15814933 + (TTA)n Simple_repeat Simple_repeat 2 66 0 2 639 26 0 0 0 chr2L 7197454 7197480 -15814064 + AT_rich Low_complexity Low_complexity 1 26 0 2 639 22 0 0 0 chr2L 7198024 7198046 -15813498 + AT_rich Low_complexity Low_complexity 1 22 0 2 639 24 0 0 0 chr2L 7199287 7199311 -15812233 + AT_rich Low_complexity Low_complexity 1 24 0 2 639 183 42 0 0 chr2L 7199997 7200021 -15811523 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 639 41 36 0 0 chr2L 7202643 7202698 -15808846 + AT_rich Low_complexity Low_complexity 1 55 0 2 639 215 143 0 39 chr2L 7202934 7202985 -15808559 + (TATG)n Simple_repeat Simple_repeat 4 52 0 2 639 180 0 0 0 chr2L 7207410 7207430 -15804114 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 639 280 224 0 56 chr2L 7207533 7207604 -15803940 + (ATGGTG)n Simple_repeat Simple_repeat 5 71 0 2 640 26 30 0 0 chr2L 7214921 7214954 -15796590 + AT_rich Low_complexity Low_complexity 1 33 0 2 640 21 57 0 0 chr2L 7217634 7217669 -15793875 + AT_rich Low_complexity Low_complexity 1 35 0 2 640 201 132 0 0 chr2L 7219429 7219467 -15792077 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 640 222 208 0 0 chr2L 7219792 7219845 -15791699 + (TTG)n Simple_repeat Simple_repeat 2 54 0 2 640 21 0 0 0 chr2L 7220272 7220293 -15791251 + AT_rich Low_complexity Low_complexity 1 21 0 2 640 21 36 0 0 chr2L 7223216 7223244 -15788300 + AT_rich Low_complexity Low_complexity 1 28 0 2 640 339 65 0 0 chr2L 7223466 7223512 -15788032 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 640 25 0 0 0 chr2L 7224212 7224237 -15787307 + AT_rich Low_complexity Low_complexity 1 25 0 2 640 208 186 17 17 chr2L 7226094 7226154 -15785390 + T-rich Low_complexity Low_complexity 1 60 0 2 640 21 36 0 0 chr2L 7226710 7226738 -15784806 + AT_rich Low_complexity Low_complexity 1 28 0 2 640 21 36 0 0 chr2L 7228218 7228246 -15783298 + AT_rich Low_complexity Low_complexity 1 28 0 2 640 186 71 0 0 chr2L 7230304 7230332 -15781212 + (TCC)n Simple_repeat Simple_repeat 3 30 0 2 640 1508 70 180 32 chr2L 7232850 7233100 -15778444 - DNAREP1_DM LINE Penelope -9 585 299 2 640 850 110 31 0 chr2L 7233100 7233227 -15778317 - DNAREP1_DM LINE Penelope -462 132 2 2 640 215 329 0 0 chr2L 7236181 7236260 -15775284 + C-rich Low_complexity Low_complexity 1 79 0 2 640 23 0 0 0 chr2L 7237807 7237830 -15773714 + AT_rich Low_complexity Low_complexity 1 23 0 2 640 26 30 0 0 chr2L 7239907 7239940 -15771604 + AT_rich Low_complexity Low_complexity 1 33 0 2 640 24 0 0 0 chr2L 7241980 7242004 -15769540 + AT_rich Low_complexity Low_complexity 1 24 0 2 640 21 57 0 0 chr2L 7246534 7246569 -15764975 + AT_rich Low_complexity Low_complexity 1 35 0 2 640 22 80 0 0 chr2L 7248476 7248526 -15763018 + AT_rich Low_complexity Low_complexity 1 50 0 2 640 21 36 0 0 chr2L 7250003 7250031 -15761513 + AT_rich Low_complexity Low_complexity 1 28 0 2 640 42 57 0 0 chr2L 7253166 7253236 -15758308 + AT_rich Low_complexity Low_complexity 1 70 0 2 640 21 57 0 0 chr2L 7254556 7254591 -15756953 + AT_rich Low_complexity Low_complexity 1 35 0 2 640 214 29 0 54 chr2L 7255492 7255529 -15756015 + (TTTTTG)n Simple_repeat Simple_repeat 5 39 0 2 640 258 167 0 0 chr2L 7255714 7255774 -15755770 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 640 436 153 0 0 chr2L 7257362 7257434 -15754110 + DNAREP1_DM LINE Penelope 1 72 -522 3 640 253 88 0 0 chr2L 7257443 7257477 -15754067 + DNAREP1_DM LINE Penelope 555 588 -6 3 640 200 80 19 74 chr2L 7258431 7258485 -15753059 + (TTAA)n Simple_repeat Simple_repeat 2 52 0 3 640 213 151 75 0 chr2L 7261178 7261231 -15750313 + (CTTG)n Simple_repeat Simple_repeat 2 58 0 3 640 215 194 0 0 chr2L 7262685 7262721 -15748823 + (CAG)n Simple_repeat Simple_repeat 3 38 0 3 640 231 88 0 0 chr2L 7263259 7263293 -15748251 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 640 217 234 0 38 chr2L 7265431 7265511 -15746033 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 3 640 261 119 0 0 chr2L 7266725 7266767 -15744777 + (ACTG)n Simple_repeat Simple_repeat 1 42 0 3 640 34 24 0 0 chr2L 7269518 7269559 -15741985 + AT_rich Low_complexity Low_complexity 1 41 0 3 640 22 0 0 0 chr2L 7270521 7270543 -15741001 + AT_rich Low_complexity Low_complexity 1 22 0 3 640 27 0 0 0 chr2L 7271880 7271907 -15739637 + AT_rich Low_complexity Low_complexity 1 27 0 3 640 204 120 19 74 chr2L 7273601 7273655 -15737889 + A-rich Low_complexity Low_complexity 3 53 0 3 640 23 54 0 0 chr2L 7273846 7273883 -15737661 + AT_rich Low_complexity Low_complexity 1 37 0 3 640 183 188 0 0 chr2L 7275820 7275868 -15735676 + (CTG)n Simple_repeat Simple_repeat 1 48 0 3 640 188 103 0 49 chr2L 7276700 7276741 -15734803 + (CTG)n Simple_repeat Simple_repeat 3 41 0 3 640 186 103 0 0 chr2L 7276974 7277003 -15734541 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 3 640 269 228 0 0 chr2L 7277201 7277293 -15734251 - ROO_I LTR Pao -7513 743 652 3 640 289 109 31 0 chr2L 7282592 7282656 -15728888 + (CAG)n Simple_repeat Simple_repeat 3 68 0 3 640 35 63 0 0 chr2L 7283562 7283625 -15727919 + AT_rich Low_complexity Low_complexity 1 63 0 3 640 43 35 0 0 chr2L 7285419 7285476 -15726068 + AT_rich Low_complexity Low_complexity 1 57 0 3 640 205 191 0 0 chr2L 7287234 7287276 -15724268 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 640 189 0 0 0 chr2L 7290078 7290099 -15721445 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3 640 22 0 0 0 chr2L 7290826 7290848 -15720696 + AT_rich Low_complexity Low_complexity 1 22 0 3 640 279 114 0 0 chr2L 7292368 7292412 -15719132 + (CATCC)n Simple_repeat Simple_repeat 2 45 0 3 640 215 172 33 33 chr2L 7292658 7292718 -15718826 + (GTTTG)n Simple_repeat Simple_repeat 4 63 0 3 640 216 143 0 0 chr2L 7294045 7294087 -15717457 + (CAATC)n Simple_repeat Simple_repeat 4 45 0 3 640 27 29 0 0 chr2L 7294715 7294749 -15716795 + AT_rich Low_complexity Low_complexity 1 34 0 3 640 212 174 0 21 chr2L 7314136 7314183 -15697361 + (CAGC)n Simple_repeat Simple_repeat 3 48 0 3 640 24 0 0 0 chr2L 7316102 7316126 -15695418 + AT_rich Low_complexity Low_complexity 1 24 0 3 640 201 232 9 75 chr2L 7316169 7316276 -15695268 + A-rich Low_complexity Low_complexity 3 102 0 3 640 232 167 0 0 chr2L 7320362 7320410 -15691134 + (CATCC)n Simple_repeat Simple_repeat 3 50 0 3 640 202 208 0 0 chr2L 7322537 7322585 -15688959 + GA-rich Low_complexity Low_complexity 1 48 0 3 640 288 127 0 0 chr2L 7323390 7323445 -15688099 + (GACTG)n Simple_repeat Simple_repeat 3 57 0 3 640 25 0 0 0 chr2L 7324798 7324823 -15686721 + AT_rich Low_complexity Low_complexity 1 25 0 3 640 216 0 0 0 chr2L 7326099 7326123 -15685421 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 640 214 132 0 36 chr2L 7327541 7327596 -15683948 + A-rich Low_complexity Low_complexity 5 57 0 3 640 22 0 0 0 chr2L 7329874 7329896 -15681648 + AT_rich Low_complexity Low_complexity 1 22 0 3 640 39 0 0 0 chr2L 7332068 7332107 -15679437 + AT_rich Low_complexity Low_complexity 1 39 0 3 640 292 292 0 11 chr2L 7333792 7333882 -15677662 + (TCCGG)n Simple_repeat Simple_repeat 2 90 0 3 640 219 103 0 0 chr2L 7334400 7334439 -15677105 + (A)n Simple_repeat Simple_repeat 1 39 0 3 640 207 100 0 0 chr2L 7334922 7334952 -15676592 + (CATATA)n Simple_repeat Simple_repeat 3 32 0 3 640 22 0 0 0 chr2L 7336491 7336513 -15675031 + AT_rich Low_complexity Low_complexity 1 22 0 3 641 207 96 135 0 chr2L 7340370 7340422 -15671122 + (GTATG)n Simple_repeat Simple_repeat 5 63 0 3 641 4017 0 0 0 chr2L 7343380 7343808 -15667736 + ROO_LTR LTR Pao 1 428 0 3 641 37297 1 0 4 chr2L 7343808 7347953 -15663591 + ROO_I LTR Pao 1 4130 -4126 3 641 11755 1 0 0 chr2L 7347953 7349248 -15662296 + ROO_I LTR Pao 4737 6031 -2225 3 641 6735 3 24 0 chr2L 7349244 7350010 -15661534 + ROO_I LTR Pao 7473 8256 0 3 641 4017 0 0 0 chr2L 7350010 7350438 -15661106 + ROO_LTR LTR Pao 1 428 0 3 641 189 154 0 0 chr2L 7353684 7353723 -15657821 + A-rich Low_complexity Low_complexity 1 39 0 3 641 23 0 0 0 chr2L 7354169 7354192 -15657352 + AT_rich Low_complexity Low_complexity 1 23 0 3 641 22 0 0 0 chr2L 7360253 7360275 -15651269 + AT_rich Low_complexity Low_complexity 1 22 0 3 641 22 35 0 0 chr2L 7360961 7360990 -15650554 + AT_rich Low_complexity Low_complexity 1 29 0 3 641 280 253 12 12 chr2L 7363230 7363310 -15648234 + (CGA)n Simple_repeat Simple_repeat 2 81 0 3 641 22 80 0 0 chr2L 7363663 7363713 -15647831 + AT_rich Low_complexity Low_complexity 1 50 0 3 641 24 32 0 0 chr2L 7364225 7364256 -15647288 + AT_rich Low_complexity Low_complexity 1 31 0 3 641 376 105 0 26 chr2L 7364853 7364931 -15646613 + (CAG)n Simple_repeat Simple_repeat 2 77 0 3 641 32 57 0 0 chr2L 7366908 7366961 -15644583 + AT_rich Low_complexity Low_complexity 1 53 0 3 641 24 0 0 0 chr2L 7367492 7367516 -15644028 + AT_rich Low_complexity Low_complexity 1 24 0 3 641 295 193 11 11 chr2L 7372621 7372710 -15638834 + (TCCG)n Simple_repeat Simple_repeat 2 90 0 3 641 213 65 0 0 chr2L 7373095 7373126 -15638418 + (CTG)n Simple_repeat Simple_repeat 2 32 0 3 641 186 43 0 0 chr2L 7374197 7374220 -15637324 + (TC)n Simple_repeat Simple_repeat 2 24 0 3 641 183 129 0 0 chr2L 7376207 7376238 -15635306 + (GATTG)n Simple_repeat Simple_repeat 3 33 0 3 641 21 57 0 0 chr2L 7376955 7376990 -15634554 + AT_rich Low_complexity Low_complexity 1 35 0 3 641 25 83 0 0 chr2L 7378706 7378766 -15632778 + AT_rich Low_complexity Low_complexity 1 60 0 3 641 185 0 40 0 chr2L 7382975 7383000 -15628544 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 641 22 0 0 0 chr2L 7385009 7385031 -15626513 + AT_rich Low_complexity Low_complexity 1 22 0 3 641 23 0 0 0 chr2L 7385832 7385855 -15625689 + AT_rich Low_complexity Low_complexity 1 23 0 3 641 27 0 0 0 chr2L 7388427 7388454 -15623090 + AT_rich Low_complexity Low_complexity 1 27 0 3 641 29 0 0 0 chr2L 7396030 7396059 -15615485 + AT_rich Low_complexity Low_complexity 1 29 0 3 641 25 31 0 0 chr2L 7398335 7398367 -15613177 + AT_rich Low_complexity Low_complexity 1 32 0 3 641 22 109 0 0 chr2L 7401001 7401093 -15610451 + AT_rich Low_complexity Low_complexity 1 92 0 3 641 23 68 0 0 chr2L 7401787 7401831 -15609713 + AT_rich Low_complexity Low_complexity 1 44 0 3 641 21 0 0 0 chr2L 7404193 7404214 -15607330 + AT_rich Low_complexity Low_complexity 1 21 0 3 641 21 36 0 0 chr2L 7407418 7407446 -15604098 + AT_rich Low_complexity Low_complexity 1 28 0 3 641 30 100 0 0 chr2L 7409866 7409966 -15601578 + AT_rich Low_complexity Low_complexity 1 100 0 3 641 412 224 140 13 chr2L 7410414 7410600 -15600944 - DNAREP1_DM LINE Penelope 0 594 341 3 641 26 64 0 0 chr2L 7410619 7410666 -15600878 + AT_rich Low_complexity Low_complexity 1 47 0 3 641 23 0 0 0 chr2L 7413343 7413366 -15598178 + AT_rich Low_complexity Low_complexity 1 23 0 3 641 25 31 0 0 chr2L 7414790 7414822 -15596722 + AT_rich Low_complexity Low_complexity 1 32 0 3 641 264 111 0 0 chr2L 7418665 7418710 -15592834 + (GGGAGA)n Simple_repeat Simple_repeat 3 47 0 3 641 31 44 0 0 chr2L 7418961 7419006 -15592538 + AT_rich Low_complexity Low_complexity 1 45 0 3 641 26 50 0 0 chr2L 7421633 7421673 -15589871 + AT_rich Low_complexity Low_complexity 1 40 0 3 641 221 163 0 23 chr2L 7424645 7424689 -15586855 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 641 225 65 0 0 chr2L 7424762 7424793 -15586751 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 641 316 283 0 0 chr2L 7428465 7428610 -15582934 + (CAG)n Simple_repeat Simple_repeat 3 147 0 3 641 22 35 0 0 chr2L 7430049 7430078 -15581466 + AT_rich Low_complexity Low_complexity 1 29 0 3 641 23 0 0 0 chr2L 7431674 7431697 -15579847 + AT_rich Low_complexity Low_complexity 1 23 0 3 641 23 54 0 0 chr2L 7432711 7432748 -15578796 + AT_rich Low_complexity Low_complexity 1 37 0 3 641 23 54 0 0 chr2L 7434832 7434869 -15576675 + AT_rich Low_complexity Low_complexity 1 37 0 3 641 21 62 0 44 chr2L 7437105 7437173 -15574371 + AT_rich Low_complexity Low_complexity 1 65 0 3 641 30 0 0 0 chr2L 7438545 7438575 -15572969 + AT_rich Low_complexity Low_complexity 1 30 0 3 641 192 143 0 0 chr2L 7442122 7442164 -15569380 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 3 641 24 0 0 0 chr2L 7443857 7443881 -15567663 + AT_rich Low_complexity Low_complexity 1 24 0 3 641 29 0 0 0 chr2L 7444012 7444041 -15567503 + AT_rich Low_complexity Low_complexity 1 29 0 3 641 252 86 0 0 chr2L 7448738 7448773 -15562771 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 641 25 0 0 0 chr2L 7450155 7450180 -15561364 + AT_rich Low_complexity Low_complexity 1 25 0 3 641 21 36 0 0 chr2L 7450433 7450461 -15561083 + AT_rich Low_complexity Low_complexity 1 28 0 3 641 29 84 0 0 chr2L 7451539 7451610 -15559934 + AT_rich Low_complexity Low_complexity 1 71 0 3 641 28 0 0 0 chr2L 7452677 7452705 -15558839 + AT_rich Low_complexity Low_complexity 1 28 0 3 641 189 0 0 0 chr2L 7462789 7462810 -15548734 + (GCTG)n Simple_repeat Simple_repeat 2 22 0 3 641 198 150 0 0 chr2L 7463663 7463703 -15547841 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 641 23 0 0 0 chr2L 7465037 7465060 -15546484 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 240 86 0 0 chr2L 7472271 7472306 -15539238 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 3 642 23 33 0 0 chr2L 7472449 7472479 -15539065 + AT_rich Low_complexity Low_complexity 1 30 0 3 642 25 0 0 0 chr2L 7472842 7472867 -15538677 + AT_rich Low_complexity Low_complexity 1 25 0 3 642 28 0 0 0 chr2L 7474563 7474591 -15536953 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 23 0 0 0 chr2L 7476739 7476762 -15534782 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 23 0 0 0 chr2L 7477136 7477159 -15534385 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 25 65 0 0 chr2L 7480904 7480950 -15530594 + AT_rich Low_complexity Low_complexity 1 46 0 3 642 205 179 0 0 chr2L 7487936 7487975 -15523569 + A-rich Low_complexity Low_complexity 3 41 0 3 642 29 28 0 0 chr2L 7492075 7492111 -15519433 + AT_rich Low_complexity Low_complexity 1 36 0 3 642 30 27 0 0 chr2L 7492744 7492781 -15518763 + AT_rich Low_complexity Low_complexity 1 37 0 3 642 192 152 0 0 chr2L 7495312 7495345 -15516199 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 642 221 57 0 28 chr2L 7509419 7509455 -15502089 + (TTA)n Simple_repeat Simple_repeat 2 36 0 3 642 23 50 0 48 chr2L 7510047 7510110 -15501434 + AT_rich Low_complexity Low_complexity 1 60 0 3 642 183 80 0 0 chr2L 7510769 7510794 -15500750 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 3 642 204 40 0 0 chr2L 7523321 7523346 -15488198 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 642 180 0 0 0 chr2L 7524734 7524754 -15486790 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 642 210 185 0 53 chr2L 7525555 7525612 -15485932 + T-rich Low_complexity Low_complexity 1 54 0 3 642 24 0 0 0 chr2L 7526623 7526647 -15484897 + AT_rich Low_complexity Low_complexity 1 24 0 3 642 203 88 29 0 chr2L 7526928 7526962 -15484582 + (CATATA)n Simple_repeat Simple_repeat 1 35 0 3 642 227 190 19 48 chr2L 7529231 7529336 -15482208 - ROO_I LTR Pao -7513 743 642 3 642 212 200 0 14 chr2L 7529454 7529525 -15482019 + (CTG)n Simple_repeat Simple_repeat 2 71 0 3 642 27 62 0 0 chr2L 7530776 7530824 -15480720 + AT_rich Low_complexity Low_complexity 1 48 0 3 642 22 0 0 0 chr2L 7531069 7531091 -15480453 + AT_rich Low_complexity Low_complexity 1 22 0 3 642 21 36 0 0 chr2L 7534116 7534144 -15477400 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 226 156 0 22 chr2L 7535484 7535530 -15476014 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 3 642 219 69 0 0 chr2L 7538993 7539022 -15472522 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 642 21 36 0 0 chr2L 7546366 7546394 -15465150 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 21 71 0 0 chr2L 7547243 7547285 -15464259 + AT_rich Low_complexity Low_complexity 1 42 0 3 642 2349 0 0 4 chr2L 7548135 7548411 -15463133 - BURDOCK_LTR LTR Gypsy 0 275 1 3 642 9421 0 1 3 chr2L 7548412 7549511 -15462033 - BURDOCK_I LTR Gypsy 0 5860 4764 3 642 6202 4 0 0 chr2L 7549504 7550238 -15461306 - BURDOCK_I LTR Gypsy -5126 734 1 3 642 2349 0 0 4 chr2L 7550238 7550514 -15461030 - BURDOCK_LTR LTR Gypsy 0 275 1 3 642 24 53 0 0 chr2L 7551512 7551550 -15459994 + AT_rich Low_complexity Low_complexity 1 38 0 3 642 23 0 0 0 chr2L 7552948 7552971 -15458573 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 37 23 0 0 chr2L 7554102 7554146 -15457398 + AT_rich Low_complexity Low_complexity 1 44 0 3 642 30 100 0 0 chr2L 7559264 7559364 -15452180 + AT_rich Low_complexity Low_complexity 1 100 0 3 642 225 200 0 0 chr2L 7562540 7562585 -15448959 + (ATGTG)n Simple_repeat Simple_repeat 3 47 0 3 642 51 70 0 0 chr2L 7563197 7563297 -15448247 + AT_rich Low_complexity Low_complexity 1 100 0 3 642 27 73 0 0 chr2L 7564271 7564326 -15447218 + AT_rich Low_complexity Low_complexity 1 55 0 3 642 21 0 0 0 chr2L 7565111 7565132 -15446412 + AT_rich Low_complexity Low_complexity 1 21 0 3 642 21 57 0 0 chr2L 7565866 7565901 -15445643 + AT_rich Low_complexity Low_complexity 1 35 0 3 642 25 0 0 0 chr2L 7567941 7567966 -15443578 + AT_rich Low_complexity Low_complexity 1 25 0 3 642 232 162 0 93 chr2L 7568843 7568918 -15442626 + T-rich Low_complexity Low_complexity 2 69 0 3 642 22 35 0 0 chr2L 7570428 7570457 -15441087 + AT_rich Low_complexity Low_complexity 1 29 0 3 642 26 30 0 0 chr2L 7572802 7572835 -15438709 + AT_rich Low_complexity Low_complexity 1 33 0 3 642 25 65 0 0 chr2L 7574354 7574400 -15437144 + AT_rich Low_complexity Low_complexity 1 46 0 3 642 246 32 0 0 chr2L 7574889 7574920 -15436624 + (CAA)n Simple_repeat Simple_repeat 2 32 0 3 642 21 0 0 0 chr2L 7575120 7575141 -15436403 + AT_rich Low_complexity Low_complexity 1 21 0 3 642 24 0 0 0 chr2L 7576210 7576234 -15435310 + AT_rich Low_complexity Low_complexity 1 24 0 3 642 29 0 0 0 chr2L 7578734 7578763 -15432781 + AT_rich Low_complexity Low_complexity 1 29 0 3 642 1000 8 0 0 chr2L 7579254 7579380 -15432164 - BS LINE Jockey 0 5126 5001 3 642 23 33 0 0 chr2L 7579435 7579465 -15432079 + AT_rich Low_complexity Low_complexity 1 30 0 3 642 23 33 0 0 chr2L 7581042 7581072 -15430472 + AT_rich Low_complexity Low_complexity 1 30 0 3 642 27 49 0 0 chr2L 7581554 7581595 -15429949 + AT_rich Low_complexity Low_complexity 1 41 0 3 642 32 0 0 0 chr2L 7581857 7581889 -15429655 + AT_rich Low_complexity Low_complexity 1 32 0 3 642 25 65 0 0 chr2L 7583278 7583324 -15428220 + AT_rich Low_complexity Low_complexity 1 46 0 3 642 27 0 0 0 chr2L 7584420 7584447 -15427097 + AT_rich Low_complexity Low_complexity 1 27 0 3 642 27 29 0 0 chr2L 7586787 7586821 -15424723 + AT_rich Low_complexity Low_complexity 1 34 0 3 642 28 79 0 0 chr2L 7588224 7588287 -15423257 + AT_rich Low_complexity Low_complexity 1 63 0 3 642 27 0 0 0 chr2L 7590491 7590518 -15421026 + AT_rich Low_complexity Low_complexity 1 27 0 3 642 33 43 0 0 chr2L 7595272 7595319 -15416225 + AT_rich Low_complexity Low_complexity 1 47 0 3 642 33 0 0 0 chr2L 7595373 7595406 -15416138 + AT_rich Low_complexity Low_complexity 1 33 0 3 642 23 33 0 0 chr2L 7595429 7595459 -15416085 + AT_rich Low_complexity Low_complexity 1 30 0 3 642 231 125 0 0 chr2L 7596051 7596091 -15415453 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 3 642 239 270 0 0 chr2L 7598114 7598177 -15413367 + (CTCCG)n Simple_repeat Simple_repeat 1 63 0 3 643 25 51 0 0 chr2L 7603862 7603901 -15407643 + AT_rich Low_complexity Low_complexity 1 39 0 3 643 24 0 0 0 chr2L 7605238 7605262 -15406282 + AT_rich Low_complexity Low_complexity 1 24 0 3 643 25 0 0 0 chr2L 7605324 7605349 -15406195 + AT_rich Low_complexity Low_complexity 1 25 0 3 643 24 0 0 0 chr2L 7606743 7606767 -15404777 + AT_rich Low_complexity Low_complexity 1 24 0 3 643 22 0 0 0 chr2L 7608925 7608947 -15402597 + AT_rich Low_complexity Low_complexity 1 22 0 3 643 24 0 0 0 chr2L 7609566 7609590 -15401954 + AT_rich Low_complexity Low_complexity 1 24 0 3 643 22 56 0 0 chr2L 7614790 7614826 -15396718 + AT_rich Low_complexity Low_complexity 1 36 0 3 643 243 203 0 0 chr2L 7615760 7615834 -15395710 + (CCA)n Simple_repeat Simple_repeat 3 76 0 3 643 22 0 0 0 chr2L 7621433 7621455 -15390089 + AT_rich Low_complexity Low_complexity 1 22 0 3 643 29 47 0 0 chr2L 7626987 7627030 -15384514 + AT_rich Low_complexity Low_complexity 1 43 0 3 643 24 0 0 0 chr2L 7631083 7631107 -15380437 + AT_rich Low_complexity Low_complexity 1 24 0 3 643 211 50 0 70 chr2L 7632600 7632643 -15378901 + (GGTTG)n Simple_repeat Simple_repeat 5 44 0 3 643 209 213 0 0 chr2L 7638053 7638100 -15373444 + T-rich Low_complexity Low_complexity 1 47 0 3 643 24 0 0 0 chr2L 7639080 7639104 -15372440 + AT_rich Low_complexity Low_complexity 1 24 0 3 643 23 0 0 0 chr2L 7640076 7640099 -15371445 + AT_rich Low_complexity Low_complexity 1 23 0 3 643 22 0 0 0 chr2L 7641678 7641700 -15369844 + AT_rich Low_complexity Low_complexity 1 22 0 3 643 22 0 0 0 chr2L 7642670 7642692 -15368852 + AT_rich Low_complexity Low_complexity 1 22 0 3 643 180 182 0 0 chr2L 7643712 7643756 -15367788 + (CTG)n Simple_repeat Simple_repeat 3 46 0 3 643 21 0 0 0 chr2L 7646812 7646833 -15364711 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 222 167 0 62 chr2L 7647167 7647231 -15364313 + (GTTTG)n Simple_repeat Simple_repeat 4 63 0 3 643 24 32 0 0 chr2L 7647667 7647698 -15363846 + AT_rich Low_complexity Low_complexity 1 31 0 3 643 227 263 0 13 chr2L 7654109 7654186 -15357358 + (CA)n Simple_repeat Simple_repeat 1 76 0 3 643 28 0 0 0 chr2L 7657565 7657593 -15353951 + AT_rich Low_complexity Low_complexity 1 28 0 3 643 21 36 0 0 chr2L 7659814 7659842 -15351702 + AT_rich Low_complexity Low_complexity 1 28 0 3 643 26 0 0 0 chr2L 7660859 7660885 -15350659 + AT_rich Low_complexity Low_complexity 1 26 0 3 643 24 32 0 0 chr2L 7661628 7661659 -15349885 + AT_rich Low_complexity Low_complexity 1 31 0 3 643 21 0 0 0 chr2L 7662742 7662763 -15348781 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 23 0 0 0 chr2L 7666998 7667021 -15344523 + AT_rich Low_complexity Low_complexity 1 23 0 3 643 23 0 0 0 chr2L 7669559 7669582 -15341962 + AT_rich Low_complexity Low_complexity 1 23 0 3 643 227 169 82 82 chr2L 7677541 7677638 -15333906 + ROOA_I LTR Pao 792 888 -5961 3 643 27 29 0 0 chr2L 7700906 7700940 -15310604 + AT_rich Low_complexity Low_complexity 1 34 0 3 643 24 53 0 0 chr2L 7702451 7702489 -15309055 + AT_rich Low_complexity Low_complexity 1 38 0 3 643 21 0 0 0 chr2L 7709293 7709314 -15302230 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 22 35 0 0 chr2L 7713994 7714023 -15297521 + AT_rich Low_complexity Low_complexity 1 29 0 3 643 21 0 0 0 chr2L 7714835 7714856 -15296688 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 28 29 0 0 chr2L 7716647 7716682 -15294862 + AT_rich Low_complexity Low_complexity 1 35 0 3 643 23 33 0 0 chr2L 7716974 7717004 -15294540 + AT_rich Low_complexity Low_complexity 1 30 0 3 643 235 183 254 0 chr2L 7719671 7719742 -15291802 - DNAREP1_DM LINE Penelope -39 555 467 3 643 22 0 0 0 chr2L 7722340 7722362 -15289182 + AT_rich Low_complexity Low_complexity 1 22 0 3 643 29 60 0 0 chr2L 7725058 7725108 -15286436 + AT_rich Low_complexity Low_complexity 1 50 0 3 643 27 29 0 0 chr2L 7730116 7730150 -15281394 + AT_rich Low_complexity Low_complexity 1 34 0 3 643 21 0 0 0 chr2L 7731012 7731033 -15280511 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 192 97 0 0 chr2L 7731452 7731483 -15280061 + (CGAAT)n Simple_repeat Simple_repeat 4 34 0 3 643 254 179 11 116 chr2L 7732725 7732820 -15278724 - ROO_I LTR Pao -7527 729 645 3 644 39 22 0 0 chr2L 7733562 7733608 -15277936 + AT_rich Low_complexity Low_complexity 1 46 0 3 644 27 29 0 0 chr2L 7736256 7736290 -15275254 + AT_rich Low_complexity Low_complexity 1 34 0 3 644 21 0 0 0 chr2L 7737152 7737173 -15274371 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 192 97 0 0 chr2L 7737592 7737623 -15273921 + (CGAAT)n Simple_repeat Simple_repeat 4 34 0 3 644 254 179 11 116 chr2L 7738865 7738960 -15272584 - ROO_I LTR Pao -7527 729 645 3 644 39 22 0 0 chr2L 7739702 7739748 -15271796 + AT_rich Low_complexity Low_complexity 1 46 0 3 644 180 0 0 0 chr2L 7745674 7745694 -15265850 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 644 24 0 0 0 chr2L 7747147 7747171 -15264373 + AT_rich Low_complexity Low_complexity 1 24 0 3 644 28 0 0 0 chr2L 7749226 7749254 -15262290 + AT_rich Low_complexity Low_complexity 1 28 0 3 644 24 53 0 0 chr2L 7751318 7751356 -15260188 + AT_rich Low_complexity Low_complexity 1 38 0 3 644 365 284 0 10 chr2L 7751359 7751462 -15260082 + DNAREP1_DM LINE Penelope 3 104 -490 3 644 24 0 0 0 chr2L 7751462 7751486 -15260058 + AT_rich Low_complexity Low_complexity 1 24 0 3 644 204 306 0 0 chr2L 7752545 7752607 -15258937 + (CGG)n Simple_repeat Simple_repeat 3 64 0 3 644 210 37 0 0 chr2L 7753301 7753328 -15258216 + (CCCCAA)n Simple_repeat Simple_repeat 2 28 0 3 644 34 79 0 0 chr2L 7753831 7753907 -15257637 + AT_rich Low_complexity Low_complexity 1 76 0 3 644 22 0 0 0 chr2L 7756993 7757015 -15254529 + AT_rich Low_complexity Low_complexity 1 22 0 3 644 23 33 0 0 chr2L 7765176 7765206 -15246338 + AT_rich Low_complexity Low_complexity 1 30 0 3 644 30 93 0 0 chr2L 7765935 7766021 -15245523 + AT_rich Low_complexity Low_complexity 1 86 0 3 644 180 125 0 0 chr2L 7766505 7766537 -15245007 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 644 26 30 0 0 chr2L 7766816 7766849 -15244695 + AT_rich Low_complexity Low_complexity 1 33 0 3 644 31 88 0 0 chr2L 7768269 7768349 -15243195 + AT_rich Low_complexity Low_complexity 1 80 0 3 644 39 50 0 0 chr2L 7770040 7770100 -15241444 + AT_rich Low_complexity Low_complexity 1 60 0 3 644 26 0 0 0 chr2L 7770745 7770771 -15240773 + AT_rich Low_complexity Low_complexity 1 26 0 3 644 27 0 0 0 chr2L 7773305 7773332 -15238212 + AT_rich Low_complexity Low_complexity 1 27 0 3 644 31 0 0 0 chr2L 7773397 7773428 -15238116 + AT_rich Low_complexity Low_complexity 1 31 0 3 644 225 268 7 96 chr2L 7777058 7777194 -15234350 - DOC3_DM LINE Jockey -4105 635 512 3 644 225 172 0 162 chr2L 7777121 7777232 -15234312 - ROO_I LTR Pao -7523 733 641 3 644 408 206 229 0 chr2L 7779276 7779407 -15232137 - DNAREP1_DM LINE Penelope 0 594 434 3 644 26 0 0 0 chr2L 7781521 7781547 -15229997 + AT_rich Low_complexity Low_complexity 1 26 0 3 644 34 65 0 0 chr2L 7782719 7782781 -15228763 + AT_rich Low_complexity Low_complexity 1 62 0 3 644 182 37 0 36 chr2L 7786805 7786833 -15224711 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 644 29 28 0 0 chr2L 7795674 7795710 -15215834 + AT_rich Low_complexity Low_complexity 1 36 0 3 644 38 22 0 0 chr2L 7796310 7796355 -15215189 + AT_rich Low_complexity Low_complexity 1 45 0 3 644 22 0 0 0 chr2L 7800426 7800448 -15211096 + AT_rich Low_complexity Low_complexity 1 22 0 3 644 183 129 0 0 chr2L 7802732 7802763 -15208781 + (CTG)n Simple_repeat Simple_repeat 1 31 0 3 644 211 226 0 19 chr2L 7802830 7802884 -15208660 + (CTG)n Simple_repeat Simple_repeat 1 53 0 3 644 207 167 0 0 chr2L 7803511 7803547 -15207997 + (CTG)n Simple_repeat Simple_repeat 2 37 0 3 644 213 94 0 0 chr2L 7804682 7804714 -15206830 + (TTG)n Simple_repeat Simple_repeat 1 32 0 3 644 264 120 0 0 chr2L 7807492 7807542 -15204002 + (CATA)n Simple_repeat Simple_repeat 3 52 0 3 644 23 33 0 0 chr2L 7810359 7810389 -15201155 + AT_rich Low_complexity Low_complexity 1 30 0 3 644 21 0 0 0 chr2L 7810954 7810975 -15200569 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 24 77 0 0 chr2L 7811022 7811074 -15200470 + AT_rich Low_complexity Low_complexity 1 52 0 3 644 186 43 0 0 chr2L 7811562 7811585 -15199959 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 644 35 41 0 0 chr2L 7812139 7812188 -15199356 + AT_rich Low_complexity Low_complexity 1 49 0 3 644 27 29 0 0 chr2L 7814042 7814076 -15197468 + AT_rich Low_complexity Low_complexity 1 34 0 3 644 22 35 0 0 chr2L 7821309 7821338 -15190206 + AT_rich Low_complexity Low_complexity 1 29 0 3 644 31 0 0 0 chr2L 7821655 7821686 -15189858 + AT_rich Low_complexity Low_complexity 1 31 0 3 644 24 32 0 0 chr2L 7822151 7822182 -15189362 + AT_rich Low_complexity Low_complexity 1 31 0 3 644 23 68 0 0 chr2L 7822253 7822297 -15189247 + AT_rich Low_complexity Low_complexity 1 44 0 3 644 29 28 0 0 chr2L 7822371 7822407 -15189137 + AT_rich Low_complexity Low_complexity 1 36 0 3 644 33 43 0 0 chr2L 7827365 7827412 -15184132 + AT_rich Low_complexity Low_complexity 1 47 0 3 644 22 35 0 0 chr2L 7829196 7829225 -15182319 + AT_rich Low_complexity Low_complexity 1 29 0 3 644 209 128 0 21 chr2L 7832475 7832523 -15179021 + (CAG)n Simple_repeat Simple_repeat 2 48 0 3 644 239 226 37 45 chr2L 7832651 7832785 -15178759 + A-rich Low_complexity Low_complexity 6 138 0 3 644 27 49 0 0 chr2L 7835628 7835669 -15175875 + AT_rich Low_complexity Low_complexity 1 41 0 3 644 225 139 0 0 chr2L 7838920 7838963 -15172581 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 644 21 0 0 0 chr2L 7842460 7842481 -15169063 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 23 78 0 0 chr2L 7843478 7843529 -15168015 + AT_rich Low_complexity Low_complexity 1 51 0 3 644 27 49 0 0 chr2L 7844252 7844293 -15167251 + AT_rich Low_complexity Low_complexity 1 41 0 3 644 22 0 0 0 chr2L 7844905 7844927 -15166617 + AT_rich Low_complexity Low_complexity 1 22 0 3 644 24 0 0 0 chr2L 7845519 7845543 -15166001 + AT_rich Low_complexity Low_complexity 1 24 0 3 644 218 158 69 17 chr2L 7845553 7845611 -15165933 + (TTTCG)n Simple_repeat Simple_repeat 5 65 0 3 644 180 200 14 28 chr2L 7845888 7845960 -15165584 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 3 644 26 30 0 0 chr2L 7847694 7847727 -15163817 + AT_rich Low_complexity Low_complexity 1 33 0 3 644 25 0 0 0 chr2L 7850110 7850135 -15161409 + AT_rich Low_complexity Low_complexity 1 25 0 3 644 25 0 0 0 chr2L 7854015 7854040 -15157504 + AT_rich Low_complexity Low_complexity 1 25 0 3 644 25 31 0 0 chr2L 7854165 7854197 -15157347 + AT_rich Low_complexity Low_complexity 1 32 0 3 644 27 62 0 0 chr2L 7855686 7855734 -15155810 + AT_rich Low_complexity Low_complexity 1 48 0 3 644 21 0 0 0 chr2L 7856787 7856808 -15154736 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 21 0 0 0 chr2L 7856935 7856956 -15154588 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 21 36 0 0 chr2L 7858929 7858957 -15152587 + AT_rich Low_complexity Low_complexity 1 28 0 3 644 22 35 0 0 chr2L 7861602 7861631 -15149913 + AT_rich Low_complexity Low_complexity 1 29 0 3 644 181 128 21 21 chr2L 7861751 7861799 -15149745 + (TA)n Simple_repeat Simple_repeat 1 48 0 3 644 198 71 0 0 chr2L 7861960 7861988 -15149556 + (GTATG)n Simple_repeat Simple_repeat 5 32 0 3 644 195 184 0 0 chr2L 7862151 7862189 -15149355 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3 644 21 0 0 0 chr2L 7863445 7863466 -15148078 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 25 0 0 0 chr2L 7863562 7863587 -15147957 + AT_rich Low_complexity Low_complexity 1 25 0 3 645 273 57 0 0 chr2L 7866087 7866122 -15145422 + (CTG)n Simple_repeat Simple_repeat 1 35 0 3 645 202 231 25 25 chr2L 7869564 7869644 -15141900 + A-rich Low_complexity Low_complexity 1 80 0 3 645 22 56 0 0 chr2L 7870124 7870160 -15141384 + AT_rich Low_complexity Low_complexity 1 36 0 3 645 30 69 0 0 chr2L 7874800 7874858 -15136686 + AT_rich Low_complexity Low_complexity 1 58 0 3 645 216 143 0 0 chr2L 7878235 7878277 -15133267 + (TCC)n Simple_repeat Simple_repeat 1 42 0 3 645 229 238 0 23 chr2L 7878466 7878552 -15132992 - ROO_I LTR Pao -7516 740 657 3 645 263 226 0 0 chr2L 7878775 7878837 -15132707 + (CTG)n Simple_repeat Simple_repeat 1 62 0 3 645 252 159 68 0 chr2L 7887743 7887787 -15123757 + DNAREP1_DM LINE Penelope 6 52 -542 3 645 22 0 0 0 chr2L 7890662 7890684 -15120860 + AT_rich Low_complexity Low_complexity 1 22 0 3 645 21 0 0 0 chr2L 7891515 7891536 -15120008 + AT_rich Low_complexity Low_complexity 1 21 0 3 645 22 56 0 0 chr2L 7891670 7891706 -15119838 + AT_rich Low_complexity Low_complexity 1 36 0 3 645 23 33 0 0 chr2L 7891730 7891760 -15119784 + AT_rich Low_complexity Low_complexity 1 30 0 3 645 29 0 0 0 chr2L 7892176 7892205 -15119339 + AT_rich Low_complexity Low_complexity 1 29 0 3 645 23 0 0 0 chr2L 7892908 7892931 -15118613 + AT_rich Low_complexity Low_complexity 1 23 0 3 645 24 32 0 0 chr2L 7893344 7893375 -15118169 + AT_rich Low_complexity Low_complexity 1 31 0 3 645 23 0 0 0 chr2L 7893702 7893725 -15117819 + AT_rich Low_complexity Low_complexity 1 23 0 3 645 231 191 0 0 chr2L 7894587 7894634 -15116910 + CT-rich Low_complexity Low_complexity 1 47 0 3 645 200 204 20 0 chr2L 7894955 7895004 -15116540 + CT-rich Low_complexity Low_complexity 2 51 0 3 645 234 81 0 0 chr2L 7898299 7898336 -15113208 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 3 645 198 0 0 0 chr2L 7899726 7899748 -15111796 + (CACAG)n Simple_repeat Simple_repeat 5 26 0 3 645 261 209 28 37 chr2L 7901457 7901566 -15109978 + (TTTAA)n Simple_repeat Simple_repeat 3 110 0 3 645 31 26 0 0 chr2L 7902270 7902308 -15109236 + AT_rich Low_complexity Low_complexity 1 38 0 3 645 237 119 0 0 chr2L 7902492 7902534 -15109010 + (CAG)n Simple_repeat Simple_repeat 1 42 0 3 645 189 175 0 0 chr2L 7902669 7902709 -15108835 + (CACTC)n Simple_repeat Simple_repeat 3 42 0 3 645 402 21 0 0 chr2L 7904436 7904483 -15107061 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 645 192 135 0 0 chr2L 7905418 7905455 -15106089 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 645 372 88 0 0 chr2L 7905808 7905865 -15105679 + (TCCA)n Simple_repeat Simple_repeat 2 58 0 3 645 204 40 0 0 chr2L 7905921 7905946 -15105598 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 645 22 0 0 0 chr2L 7909622 7909644 -15101900 + AT_rich Low_complexity Low_complexity 1 22 0 3 645 268 250 0 23 chr2L 7909689 7909775 -15101769 + (TGGA)n Simple_repeat Simple_repeat 2 85 0 3 645 21 0 0 0 chr2L 7910658 7910679 -15100865 + AT_rich Low_complexity Low_complexity 1 21 0 3 645 453 122 0 0 chr2L 7911074 7911148 -15100396 + (TA)n Simple_repeat Simple_repeat 1 74 0 3 645 243 103 0 0 chr2L 7915505 7915544 -15096000 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 3 645 189 74 0 0 chr2L 7916234 7916261 -15095283 + (A)n Simple_repeat Simple_repeat 1 27 0 3 645 205 161 0 0 chr2L 7920466 7920497 -15091047 + T-rich Low_complexity Low_complexity 5 35 0 3 645 23 92 0 0 chr2L 7921608 7921673 -15089871 + AT_rich Low_complexity Low_complexity 1 65 0 3 645 261 83 0 0 chr2L 7923517 7923553 -15087991 + (CGA)n Simple_repeat Simple_repeat 1 36 0 3 645 229 216 0 0 chr2L 7926021 7926072 -15085472 + T-rich Low_complexity Low_complexity 1 51 0 3 645 248 188 12 59 chr2L 7927116 7927201 -15084343 + T-rich Low_complexity Low_complexity 1 81 0 3 645 186 174 0 0 chr2L 7929148 7929194 -15082350 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 645 22 56 0 0 chr2L 7929375 7929411 -15082133 + AT_rich Low_complexity Low_complexity 1 36 0 3 645 216 261 0 0 chr2L 7932083 7932152 -15079392 + A-rich Low_complexity Low_complexity 1 69 0 3 645 359 41 20 0 chr2L 7932697 7932746 -15078798 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 645 220 265 14 14 chr2L 7932937 7933006 -15078538 + (TTCGGG)n Simple_repeat Simple_repeat 5 73 0 3 645 203 217 0 28 chr2L 7933130 7933201 -15078343 + (CATATA)n Simple_repeat Simple_repeat 1 69 0 3 645 306 250 15 38 chr2L 7933355 7933488 -15078056 + (TG)n Simple_repeat Simple_repeat 1 130 0 3 645 194 81 0 26 chr2L 7938366 7938404 -15073140 + (TTGG)n Simple_repeat Simple_repeat 4 40 0 3 645 237 108 0 0 chr2L 7939042 7939079 -15072465 + (CAG)n Simple_repeat Simple_repeat 1 37 0 3 645 24 53 0 0 chr2L 7940203 7940241 -15071303 + AT_rich Low_complexity Low_complexity 1 38 0 3 645 228 35 0 0 chr2L 7940564 7940593 -15070951 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 645 210 37 0 0 chr2L 7941047 7941074 -15070470 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 645 183 42 0 0 chr2L 7941416 7941440 -15070104 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 645 25 31 0 0 chr2L 7943999 7944031 -15067513 + AT_rich Low_complexity Low_complexity 1 32 0 3 645 225 65 0 0 chr2L 7944521 7944552 -15066992 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 645 23 0 0 0 chr2L 7946717 7946740 -15064804 + AT_rich Low_complexity Low_complexity 1 23 0 3 645 185 196 20 0 chr2L 7948110 7948161 -15063383 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 3 645 30 0 0 0 chr2L 7948428 7948458 -15063086 + AT_rich Low_complexity Low_complexity 1 30 0 3 645 22 35 0 0 chr2L 7950736 7950765 -15060779 + AT_rich Low_complexity Low_complexity 1 29 0 3 645 234 91 0 0 chr2L 7951716 7951749 -15059795 + (CAG)n Simple_repeat Simple_repeat 1 33 0 3 645 221 167 0 0 chr2L 7952370 7952412 -15059132 + A-rich Low_complexity Low_complexity 1 42 0 3 645 201 74 0 0 chr2L 7952550 7952577 -15058967 + (CTG)n Simple_repeat Simple_repeat 3 29 0 3 645 240 111 0 0 chr2L 7953479 7953515 -15058029 + (CAA)n Simple_repeat Simple_repeat 1 36 0 3 645 297 197 0 0 chr2L 7953588 7953649 -15057895 + (TTG)n Simple_repeat Simple_repeat 3 63 0 3 645 24 53 0 0 chr2L 7953797 7953835 -15057709 + AT_rich Low_complexity Low_complexity 1 38 0 3 645 32 0 0 0 chr2L 7954512 7954544 -15057000 + AT_rich Low_complexity Low_complexity 1 32 0 3 645 198 222 0 0 chr2L 7955834 7955888 -15055656 + (CGAAT)n Simple_repeat Simple_repeat 1 54 0 3 645 195 167 0 0 chr2L 7955982 7956024 -15055520 + (ACTG)n Simple_repeat Simple_repeat 2 43 0 3 645 8250 1 0 1 chr2L 7959094 7960043 -15051501 + POGO DNA Pogo 1 948 -1173 3 645 3437 0 0 0 chr2L 7960041 7960450 -15051094 + POGO DNA Pogo 1713 2121 0 3 645 235 217 29 14 chr2L 7961000 7961070 -15050474 + A-rich Low_complexity Low_complexity 2 72 0 3 645 192 77 0 0 chr2L 7961221 7961247 -15050297 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 645 207 125 0 0 chr2L 7961322 7961362 -15050182 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 645 21 0 0 0 chr2L 7963591 7963612 -15047932 + AT_rich Low_complexity Low_complexity 1 21 0 3 645 27 29 0 0 chr2L 7963811 7963845 -15047699 + AT_rich Low_complexity Low_complexity 1 34 0 3 645 237 265 0 93 chr2L 7965746 7965854 -15045690 + ROO_I LTR Pao 647 744 -7512 3 645 216 0 0 0 chr2L 7966837 7966861 -15044683 + (GA)n Simple_repeat Simple_repeat 1 24 0 3 645 221 262 0 16 chr2L 7967657 7967719 -15043825 + (TTG)n Simple_repeat Simple_repeat 1 61 0 3 645 180 111 0 0 chr2L 7967996 7968023 -15043521 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 645 324 253 0 21 chr2L 7968449 7968546 -15042998 + (CAA)n Simple_repeat Simple_repeat 1 95 0 3 645 201 171 0 0 chr2L 7969619 7969654 -15041890 + T-rich Low_complexity Low_complexity 1 35 0 3 645 23 0 0 0 chr2L 7970381 7970404 -15041140 + AT_rich Low_complexity Low_complexity 1 23 0 3 645 213 121 0 0 chr2L 7971269 7971302 -15040242 + (CAA)n Simple_repeat Simple_repeat 1 33 0 3 645 22 0 0 0 chr2L 7971605 7971627 -15039917 + AT_rich Low_complexity Low_complexity 1 22 0 3 645 24 32 0 0 chr2L 7972190 7972221 -15039323 + AT_rich Low_complexity Low_complexity 1 31 0 3 645 214 161 17 35 chr2L 7974336 7974394 -15037150 + A-rich Low_complexity Low_complexity 4 60 0 3 645 25 31 0 0 chr2L 7974571 7974603 -15036941 + AT_rich Low_complexity Low_complexity 1 32 0 3 645 24 32 0 0 chr2L 7974621 7974652 -15036892 + AT_rich Low_complexity Low_complexity 1 31 0 3 645 219 188 0 0 chr2L 7976808 7976856 -15034688 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 645 225 226 0 0 chr2L 7976969 7977022 -15034522 + (TTG)n Simple_repeat Simple_repeat 1 53 0 3 645 3330 5 10 7 chr2L 7977134 7977547 -15033997 + DM297_LTR LTR Gypsy 1 414 0 3 645 43337 38 5 3 chr2L 7977547 7983640 -15027904 + DM297_I LTR Gypsy 1 6420 0 3 645 3330 5 10 7 chr2L 7983638 7984051 -15027493 + DM297_LTR LTR Gypsy 1 414 0 3 645 21 0 0 0 chr2L 7987422 7987443 -15024101 + AT_rich Low_complexity Low_complexity 1 21 0 3 645 24 32 0 0 chr2L 7989552 7989583 -15021961 + AT_rich Low_complexity Low_complexity 1 31 0 3 645 270 56 0 0 chr2L 7993578 7993614 -15017930 + (TATG)n Simple_repeat Simple_repeat 1 36 0 3 645 226 233 0 0 chr2L 7994842 7994885 -15016659 + (TATG)n Simple_repeat Simple_repeat 3 45 0 3 646 203 0 37 0 chr2L 7996767 7996794 -15014750 + (TATG)n Simple_repeat Simple_repeat 1 28 0 3 646 21 0 0 0 chr2L 7997252 7997273 -15014271 + AT_rich Low_complexity Low_complexity 1 21 0 3 646 198 143 0 0 chr2L 7997444 7997479 -15014065 + (ATCTG)n Simple_repeat Simple_repeat 5 39 0 3 646 261 0 0 0 chr2L 7999167 7999196 -15012348 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 646 423 52 0 0 chr2L 8000756 8000814 -15010730 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 3 646 52 74 0 0 chr2L 8002549 8002657 -15008887 + AT_rich Low_complexity Low_complexity 1 108 0 3 646 22 0 0 0 chr2L 8002776 8002798 -15008746 + AT_rich Low_complexity Low_complexity 1 22 0 3 646 26 30 0 0 chr2L 8003467 8003500 -15008044 + AT_rich Low_complexity Low_complexity 1 33 0 3 646 243 0 0 0 chr2L 8007182 8007209 -15004335 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 646 201 121 0 0 chr2L 8007597 8007630 -15003914 + (TATG)n Simple_repeat Simple_repeat 2 34 0 3 646 21 0 0 0 chr2L 8008153 8008174 -15003370 + AT_rich Low_complexity Low_complexity 1 21 0 3 646 24 0 0 0 chr2L 8008391 8008415 -15003129 + AT_rich Low_complexity Low_complexity 1 24 0 3 646 22 56 0 0 chr2L 8008665 8008701 -15002843 + AT_rich Low_complexity Low_complexity 1 36 0 3 646 24 0 0 0 chr2L 8008762 8008786 -15002758 + AT_rich Low_complexity Low_complexity 1 24 0 3 646 22 35 0 0 chr2L 8010904 8010933 -15000611 + AT_rich Low_complexity Low_complexity 1 29 0 3 646 2442 0 0 0 chr2L 8013668 8013944 -14997600 + Copia_LTR LTR Copia 1 276 0 3 646 41843 0 0 0 chr2L 8013944 8018538 -14993006 + Copia_I LTR Copia 1 4593 0 3 646 2442 0 0 0 chr2L 8018538 8018814 -14992730 + Copia_LTR LTR Copia 1 276 0 3 646 43618 0 0 0 chr2L 8018859 8023579 -14987965 + DOC LINE Jockey 7 4725 0 3 646 21 0 0 0 chr2L 8026838 8026859 -14984685 + AT_rich Low_complexity Low_complexity 1 21 0 3 646 37 23 0 0 chr2L 8030609 8030653 -14980891 + AT_rich Low_complexity Low_complexity 1 44 0 3 646 180 77 0 0 chr2L 8031575 8031601 -14979943 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 646 202 204 0 0 chr2L 8031790 8031834 -14979710 + GA-rich Low_complexity Low_complexity 2 45 0 3 646 828 0 0 0 chr2L 8034615 8034707 -14976837 + (TCC)n Simple_repeat Simple_repeat 3 94 0 3 646 207 0 0 0 chr2L 8035553 8035576 -14975968 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 3 646 204 40 0 0 chr2L 8038203 8038228 -14973316 + (CGAGA)n Simple_repeat Simple_repeat 2 26 0 3 646 204 122 0 0 chr2L 8038498 8038539 -14973005 + (A)n Simple_repeat Simple_repeat 1 41 0 3 646 22 0 0 0 chr2L 8039665 8039687 -14971857 + AT_rich Low_complexity Low_complexity 1 22 0 3 646 306 73 0 0 chr2L 8039986 8040027 -14971517 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 646 21 36 0 0 chr2L 8043274 8043302 -14968242 + AT_rich Low_complexity Low_complexity 1 28 0 3 646 450 58 0 115 chr2L 8051724 8051802 -14959742 - DNAREP1_DM LINE Penelope 0 594 526 3 646 21 71 0 0 chr2L 8058254 8058296 -14953248 + AT_rich Low_complexity Low_complexity 1 42 0 3 646 23 68 0 0 chr2L 8061262 8061306 -14950238 + AT_rich Low_complexity Low_complexity 1 44 0 3 646 207 0 0 0 chr2L 8071765 8071788 -14939756 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 646 27 29 0 0 chr2L 8071875 8071909 -14939635 + AT_rich Low_complexity Low_complexity 1 34 0 3 646 38 51 0 0 chr2L 8073892 8073951 -14937593 + AT_rich Low_complexity Low_complexity 1 59 0 3 646 32 26 0 0 chr2L 8081500 8081539 -14930005 + AT_rich Low_complexity Low_complexity 1 39 0 3 646 45 55 0 0 chr2L 8082167 8082240 -14929304 + AT_rich Low_complexity Low_complexity 1 73 0 3 646 197 65 32 0 chr2L 8082691 8082722 -14928822 + (CAA)n Simple_repeat Simple_repeat 1 32 0 3 646 225 211 0 17 chr2L 8083817 8083875 -14927669 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 646 220 242 0 16 chr2L 8084766 8084829 -14926715 + GA-rich Low_complexity Low_complexity 4 65 0 3 646 223 240 0 0 chr2L 8088550 8088600 -14922944 + CT-rich Low_complexity Low_complexity 1 50 0 3 646 215 209 0 0 chr2L 8089405 8089448 -14922096 + A-rich Low_complexity Low_complexity 3 45 0 3 646 207 186 11 34 chr2L 8089559 8089648 -14921896 + (CAA)n Simple_repeat Simple_repeat 2 88 0 3 646 212 179 0 0 chr2L 8090008 8090047 -14921497 + A-rich Low_complexity Low_complexity 1 39 0 3 646 280 263 0 39 chr2L 8091249 8091352 -14920192 + (TCTA)n Simple_repeat Simple_repeat 2 100 0 3 646 202 211 0 53 chr2L 8093053 8093128 -14918416 + (GTTTG)n Simple_repeat Simple_repeat 5 75 0 3 646 186 43 0 0 chr2L 8093410 8093433 -14918111 + (TTTCC)n Simple_repeat Simple_repeat 2 24 0 3 646 23 0 0 0 chr2L 8094263 8094286 -14917258 + AT_rich Low_complexity Low_complexity 1 23 0 3 646 180 182 0 0 chr2L 8094456 8094500 -14917044 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 646 23 0 0 0 chr2L 8097649 8097672 -14913872 + AT_rich Low_complexity Low_complexity 1 23 0 3 646 207 100 0 0 chr2L 8100437 8100467 -14911077 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 646 210 91 0 0 chr2L 8100896 8100929 -14910615 + (TTCGG)n Simple_repeat Simple_repeat 4 36 0 3 646 184 154 0 37 chr2L 8103509 8103563 -14907981 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 646 219 170 21 21 chr2L 8104391 8104439 -14907105 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 646 229 155 0 78 chr2L 8104733 8104810 -14906734 + (ATTCG)n Simple_repeat Simple_repeat 3 73 0 3 646 21 36 0 0 chr2L 8107716 8107744 -14903800 + AT_rich Low_complexity Low_complexity 1 28 0 3 646 297 51 0 0 chr2L 8107907 8107946 -14903598 + (CCAA)n Simple_repeat Simple_repeat 3 41 0 3 646 182 37 37 0 chr2L 8108011 8108038 -14903506 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 646 198 160 0 0 chr2L 8109428 8109478 -14902066 + A-rich Low_complexity Low_complexity 1 50 0 3 646 266 304 0 18 chr2L 8110098 8110212 -14901332 + (CAA)n Simple_repeat Simple_repeat 1 112 0 3 646 216 183 16 32 chr2L 8111596 8111658 -14899886 + A-rich Low_complexity Low_complexity 4 64 0 3 646 241 131 16 16 chr2L 8112041 8112103 -14899441 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 646 216 111 0 0 chr2L 8112654 8112690 -14898854 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 646 35 24 0 0 chr2L 8113167 8113209 -14898335 + AT_rich Low_complexity Low_complexity 1 42 0 3 646 215 113 15 46 chr2L 8115257 8115322 -14896222 + (CATA)n Simple_repeat Simple_repeat 2 64 0 3 646 193 53 0 73 chr2L 8115427 8115468 -14896076 + (CTAAA)n Simple_repeat Simple_repeat 1 38 0 3 646 213 169 0 49 chr2L 8116052 8116133 -14895411 + A-rich Low_complexity Low_complexity 2 78 0 3 646 303 288 0 35 chr2L 8116346 8116519 -14895025 + A-rich Low_complexity Low_complexity 3 169 0 3 646 233 236 0 0 chr2L 8117296 8117351 -14894193 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 646 22 0 0 0 chr2L 8118859 8118881 -14892663 + AT_rich Low_complexity Low_complexity 1 22 0 3 646 23 0 0 0 chr2L 8119148 8119171 -14892373 + AT_rich Low_complexity Low_complexity 1 23 0 3 646 22 35 0 0 chr2L 8121906 8121935 -14889609 + AT_rich Low_complexity Low_complexity 1 29 0 3 646 23 0 0 0 chr2L 8122549 8122572 -14888972 + AT_rich Low_complexity Low_complexity 1 23 0 3 647 259 250 15 0 chr2L 8127415 8127483 -14884061 + (CAA)n Simple_repeat Simple_repeat 1 69 0 3 647 23 0 0 0 chr2L 8142048 8142071 -14869473 + AT_rich Low_complexity Low_complexity 1 23 0 3 647 274 98 39 0 chr2L 8148807 8148858 -14862686 + (CAAGC)n Simple_repeat Simple_repeat 3 55 0 3 647 200 209 0 0 chr2L 8148859 8148902 -14862642 + (GATTG)n Simple_repeat Simple_repeat 3 45 0 3 647 28 0 0 0 chr2L 8149384 8149412 -14862132 + AT_rich Low_complexity Low_complexity 1 28 0 3 647 254 219 0 15 chr2L 8151157 8151222 -14860322 + T-rich Low_complexity Low_complexity 4 67 0 3 647 24 0 0 0 chr2L 8151551 8151575 -14859969 + AT_rich Low_complexity Low_complexity 1 24 0 3 647 222 37 0 0 chr2L 8152493 8152520 -14859024 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 3 647 255 234 0 0 chr2L 8153442 8153506 -14858038 + (CAA)n Simple_repeat Simple_repeat 1 64 0 3 647 26 30 0 0 chr2L 8164265 8164298 -14847246 + AT_rich Low_complexity Low_complexity 1 33 0 3 647 207 114 0 0 chr2L 8175337 8175372 -14836172 + (CCA)n Simple_repeat Simple_repeat 3 37 0 3 647 264 305 0 0 chr2L 8175886 8175981 -14835563 + T-rich Low_complexity Low_complexity 5 99 0 3 647 28 48 0 0 chr2L 8181719 8181761 -14829783 + AT_rich Low_complexity Low_complexity 1 42 0 3 647 241 279 12 0 chr2L 8184209 8184295 -14827249 + (CCA)n Simple_repeat Simple_repeat 1 87 0 3 647 22 0 0 0 chr2L 8185549 8185571 -14825973 + AT_rich Low_complexity Low_complexity 1 22 0 3 647 25 0 0 0 chr2L 8187100 8187125 -14824419 + AT_rich Low_complexity Low_complexity 1 25 0 3 647 24 53 0 0 chr2L 8189581 8189619 -14821925 + AT_rich Low_complexity Low_complexity 1 38 0 3 647 22 70 0 0 chr2L 8190133 8190176 -14821368 + AT_rich Low_complexity Low_complexity 1 43 0 3 647 28 29 0 0 chr2L 8197069 8197104 -14814440 + AT_rich Low_complexity Low_complexity 1 35 0 3 647 21 0 0 0 chr2L 8204382 8204403 -14807141 + AT_rich Low_complexity Low_complexity 1 21 0 3 647 24 32 0 0 chr2L 8214572 8214603 -14796941 + AT_rich Low_complexity Low_complexity 1 31 0 3 647 269 185 17 69 chr2L 8215605 8215663 -14795881 + DNAREP1_DM LINE Penelope 403 457 -137 3 647 23 0 0 0 chr2L 8219316 8219339 -14792205 + AT_rich Low_complexity Low_complexity 1 23 0 3 647 186 43 0 0 chr2L 8233975 8233998 -14777546 + (CAT)n Simple_repeat Simple_repeat 3 25 0 3 647 237 65 0 0 chr2L 8237618 8237649 -14773895 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 3 647 225 94 0 0 chr2L 8238881 8238913 -14772631 + (TA)n Simple_repeat Simple_repeat 1 32 0 3 647 21 57 0 0 chr2L 8240244 8240279 -14771265 + AT_rich Low_complexity Low_complexity 1 35 0 3 647 31 44 0 0 chr2L 8240606 8240651 -14770893 + AT_rich Low_complexity Low_complexity 1 45 0 3 647 198 91 0 0 chr2L 8246120 8246153 -14765391 + (TGG)n Simple_repeat Simple_repeat 3 35 0 3 647 207 69 0 0 chr2L 8254045 8254074 -14757470 + (CGAAA)n Simple_repeat Simple_repeat 1 29 0 3 648 25 51 0 0 chr2L 8258325 8258364 -14753180 + AT_rich Low_complexity Low_complexity 1 39 0 3 648 22 35 0 0 chr2L 8258544 8258573 -14752971 + AT_rich Low_complexity Low_complexity 1 29 0 3 648 204 134 27 82 chr2L 8259247 8259320 -14752224 + (GTTTG)n Simple_repeat Simple_repeat 1 69 0 3 648 22 0 0 0 chr2L 8259771 8259793 -14751751 + AT_rich Low_complexity Low_complexity 1 22 0 3 648 25 0 0 0 chr2L 8262432 8262457 -14749087 + AT_rich Low_complexity Low_complexity 1 25 0 3 648 22 0 0 0 chr2L 8262799 8262821 -14748723 + AT_rich Low_complexity Low_complexity 1 22 0 3 648 28 48 0 0 chr2L 8264220 8264262 -14747282 + AT_rich Low_complexity Low_complexity 1 42 0 3 648 35 63 0 0 chr2L 8267060 8267123 -14744421 + AT_rich Low_complexity Low_complexity 1 63 0 3 648 206 156 0 22 chr2L 8267773 8267819 -14743725 + (CAA)n Simple_repeat Simple_repeat 1 45 0 3 648 180 0 0 0 chr2L 8269537 8269557 -14741987 + (CTTAA)n Simple_repeat Simple_repeat 5 24 0 3 648 183 204 0 0 chr2L 8269562 8269606 -14741938 + (AGTTG)n Simple_repeat Simple_repeat 5 48 0 3 648 23 0 0 0 chr2L 8273199 8273222 -14738322 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 23 0 0 0 chr2L 8277810 8277833 -14733711 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 29 47 0 0 chr2L 8277889 8277932 -14733612 + AT_rich Low_complexity Low_complexity 1 43 0 3 648 321 89 0 0 chr2L 8279536 8279581 -14731963 + (CAGAA)n Simple_repeat Simple_repeat 1 45 0 3 648 189 0 0 0 chr2L 8280354 8280375 -14731169 + (TTG)n Simple_repeat Simple_repeat 2 22 0 3 648 21 0 0 0 chr2L 8282471 8282492 -14729052 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 204 125 0 0 chr2L 8286598 8286630 -14724914 + (AACTG)n Simple_repeat Simple_repeat 4 35 0 3 648 23 0 0 0 chr2L 8288349 8288372 -14723172 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 182 62 0 30 chr2L 8289105 8289138 -14722406 + (CATAT)n Simple_repeat Simple_repeat 3 34 0 3 648 192 40 0 0 chr2L 8294422 8294447 -14717097 + (A)n Simple_repeat Simple_repeat 1 25 0 3 648 209 108 0 26 chr2L 8299815 8299853 -14711691 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 648 180 125 0 0 chr2L 8300554 8300586 -14710958 + (CAA)n Simple_repeat Simple_repeat 1 32 0 3 648 23 33 0 0 chr2L 8322950 8322980 -14688564 + AT_rich Low_complexity Low_complexity 1 30 0 3 648 189 171 0 0 chr2L 8323433 8323468 -14688076 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 648 23 0 0 0 chr2L 8324262 8324285 -14687259 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 216 0 0 0 chr2L 8325516 8325540 -14686004 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 648 23 0 0 0 chr2L 8325785 8325808 -14685736 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 200 163 0 23 chr2L 8326415 8326459 -14685085 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 648 21 36 0 0 chr2L 8326699 8326727 -14684817 + AT_rich Low_complexity Low_complexity 1 28 0 3 648 41 58 0 0 chr2L 8326739 8326808 -14684736 + AT_rich Low_complexity Low_complexity 1 69 0 3 648 21 0 0 0 chr2L 8329278 8329299 -14682245 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 22 0 0 0 chr2L 8329830 8329852 -14681692 + AT_rich Low_complexity Low_complexity 1 22 0 3 648 25 31 0 0 chr2L 8332863 8332895 -14678649 + AT_rich Low_complexity Low_complexity 1 32 0 3 648 207 69 0 0 chr2L 8338182 8338211 -14673333 + (TTTCG)n Simple_repeat Simple_repeat 1 29 0 3 648 29 47 0 0 chr2L 8340330 8340373 -14671171 + AT_rich Low_complexity Low_complexity 1 43 0 3 648 24 32 0 0 chr2L 8342216 8342247 -14669297 + AT_rich Low_complexity Low_complexity 1 31 0 3 648 23 33 0 0 chr2L 8342788 8342818 -14668726 + AT_rich Low_complexity Low_complexity 1 30 0 3 648 27 29 0 0 chr2L 8343333 8343367 -14668177 + AT_rich Low_complexity Low_complexity 1 34 0 3 648 189 154 0 0 chr2L 8343723 8343762 -14667782 + GA-rich Low_complexity Low_complexity 2 40 0 3 648 28 29 0 0 chr2L 8345500 8345535 -14666009 + AT_rich Low_complexity Low_complexity 1 35 0 3 648 23 0 0 0 chr2L 8345687 8345710 -14665834 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 23 0 0 0 chr2L 8348203 8348226 -14663318 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 25 51 0 0 chr2L 8352652 8352691 -14658853 + AT_rich Low_complexity Low_complexity 1 39 0 3 648 26 0 0 0 chr2L 8357893 8357919 -14653625 + AT_rich Low_complexity Low_complexity 1 26 0 3 648 224 204 0 0 chr2L 8361975 8362019 -14649525 + (TATG)n Simple_repeat Simple_repeat 4 47 0 3 648 224 224 0 0 chr2L 8366533 8366582 -14644962 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 648 222 37 0 0 chr2L 8370481 8370508 -14641036 + (TGG)n Simple_repeat Simple_repeat 1 27 0 3 648 24 0 0 0 chr2L 8371457 8371481 -14640063 + AT_rich Low_complexity Low_complexity 1 24 0 3 648 23 0 0 0 chr2L 8375515 8375538 -14636006 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 28 0 0 0 chr2L 8381806 8381834 -14629710 + AT_rich Low_complexity Low_complexity 1 28 0 3 648 21 0 0 0 chr2L 8384212 8384233 -14627311 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 23 0 0 0 chr2L 8384325 8384348 -14627196 + AT_rich Low_complexity Low_complexity 1 23 0 3 649 210 37 0 0 chr2L 8390922 8390949 -14620595 + (TCC)n Simple_repeat Simple_repeat 1 27 0 3 649 21 0 0 0 chr2L 8396524 8396545 -14614999 + AT_rich Low_complexity Low_complexity 1 21 0 3 649 180 0 0 0 chr2L 8398505 8398525 -14613019 + (T)n Simple_repeat Simple_repeat 1 20 0 3 649 26 50 0 0 chr2L 8398741 8398781 -14612763 + AT_rich Low_complexity Low_complexity 1 40 0 3 649 23 68 0 0 chr2L 8400224 8400268 -14611276 + AT_rich Low_complexity Low_complexity 1 44 0 3 649 21 0 0 0 chr2L 8401487 8401508 -14610036 + AT_rich Low_complexity Low_complexity 1 21 0 3 649 22 35 0 0 chr2L 8403360 8403389 -14608155 + AT_rich Low_complexity Low_complexity 1 29 0 3 649 225 276 26 0 chr2L 8408062 8408138 -14603406 + (CATA)n Simple_repeat Simple_repeat 3 80 0 3 649 22 70 0 0 chr2L 8411242 8411285 -14600259 + AT_rich Low_complexity Low_complexity 1 43 0 3 649 21 57 0 0 chr2L 8415395 8415430 -14596114 + AT_rich Low_complexity Low_complexity 1 35 0 3 649 26 0 0 0 chr2L 8415562 8415588 -14595956 + AT_rich Low_complexity Low_complexity 1 26 0 3 649 206 224 0 0 chr2L 8416477 8416554 -14594990 + (TCTCTG)n Simple_repeat Simple_repeat 1 77 0 3 649 21 0 0 0 chr2L 8418659 8418680 -14592864 + AT_rich Low_complexity Low_complexity 1 21 0 3 649 207 100 0 0 chr2L 8419388 8419418 -14592126 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 649 206 310 11 0 chr2L 8420335 8420422 -14591122 + GA-rich Low_complexity Low_complexity 1 88 0 3 649 236 111 0 22 chr2L 8423245 8423291 -14588253 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 3 649 240 257 0 14 chr2L 8424976 8425047 -14586497 + CT-rich Low_complexity Low_complexity 2 71 0 3 649 30 27 0 0 chr2L 8426462 8426499 -14585045 + AT_rich Low_complexity Low_complexity 1 37 0 3 649 260 167 35 23 chr2L 8428070 8428156 -14583388 + (CAA)n Simple_repeat Simple_repeat 2 88 0 3 649 186 103 0 0 chr2L 8430046 8430075 -14581469 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 649 22 0 0 0 chr2L 8430192 8430214 -14581330 + AT_rich Low_complexity Low_complexity 1 22 0 3 649 25 31 0 0 chr2L 8430375 8430407 -14581137 + AT_rich Low_complexity Low_complexity 1 32 0 3 649 311 211 0 55 chr2L 8430407 8430517 -14581027 + A-rich Low_complexity Low_complexity 2 105 0 3 649 27 0 0 0 chr2L 8430954 8430981 -14580563 + AT_rich Low_complexity Low_complexity 1 27 0 3 649 24 32 0 0 chr2L 8432657 8432688 -14578856 + AT_rich Low_complexity Low_complexity 1 31 0 3 649 21 0 0 0 chr2L 8444200 8444221 -14567323 + AT_rich Low_complexity Low_complexity 1 21 0 3 649 3987 0 0 2 chr2L 8452475 8452904 -14558640 + ROO_LTR LTR Pao 1 428 0 3 649 75050 0 0 0 chr2L 8452904 8461159 -14550385 + ROO_I LTR Pao 1 8256 0 3 649 3987 0 0 2 chr2L 8461159 8461588 -14549956 + ROO_LTR LTR Pao 1 428 0 3 649 200 345 0 11 chr2L 8463491 8463579 -14547965 + GA-rich Low_complexity Low_complexity 2 88 0 3 649 201 74 0 0 chr2L 8463675 8463702 -14547842 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 649 271 281 0 0 chr2L 8465109 8465198 -14546346 + (CGA)n Simple_repeat Simple_repeat 3 91 0 3 649 21 57 0 0 chr2L 8488663 8488698 -14522846 + AT_rich Low_complexity Low_complexity 1 35 0 3 649 21 0 0 0 chr2L 8499235 8499256 -14512288 + AT_rich Low_complexity Low_complexity 1 21 0 3 649 231 36 0 0 chr2L 8502387 8502415 -14509129 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 649 22 70 0 0 chr2L 8506578 8506621 -14504923 + AT_rich Low_complexity Low_complexity 1 43 0 3 649 25 0 0 0 chr2L 8508445 8508470 -14503074 + AT_rich Low_complexity Low_complexity 1 25 0 3 649 519 196 0 0 chr2L 8509381 8509514 -14502030 + (CAT)n Simple_repeat Simple_repeat 3 135 0 3 649 23 0 0 0 chr2L 8512072 8512095 -14499449 + AT_rich Low_complexity Low_complexity 1 23 0 3 649 21 0 0 0 chr2L 8514957 8514978 -14496566 + AT_rich Low_complexity Low_complexity 1 21 0 3 650 27 29 0 0 chr2L 8521761 8521795 -14489749 + AT_rich Low_complexity Low_complexity 1 34 0 3 650 215 154 0 25 chr2L 8531888 8531928 -14479616 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 3 650 28 71 0 0 chr2L 8535365 8535421 -14476123 + AT_rich Low_complexity Low_complexity 1 56 0 3 650 22 0 0 0 chr2L 8535588 8535610 -14475934 + AT_rich Low_complexity Low_complexity 1 22 0 3 650 29 28 0 0 chr2L 8536655 8536691 -14474853 + AT_rich Low_complexity Low_complexity 1 36 0 3 650 241 224 0 0 chr2L 8540588 8540646 -14470898 + GA-rich Low_complexity Low_complexity 2 59 0 3 650 206 0 128 64 chr2L 8541861 8541908 -14469636 + (TTTAA)n Simple_repeat Simple_repeat 1 50 0 3 650 27 0 0 0 chr2L 8542515 8542542 -14469002 + AT_rich Low_complexity Low_complexity 1 27 0 3 650 28 29 0 0 chr2L 8542995 8543030 -14468514 + AT_rich Low_complexity Low_complexity 1 35 0 3 650 230 277 0 15 chr2L 8544831 8544897 -14466647 + (TCG)n Simple_repeat Simple_repeat 2 66 0 3 650 25 65 0 0 chr2L 8546592 8546638 -14464906 + AT_rich Low_complexity Low_complexity 1 46 0 3 650 29 0 0 0 chr2L 8547166 8547195 -14464349 + AT_rich Low_complexity Low_complexity 1 29 0 3 650 21 0 0 0 chr2L 8547274 8547295 -14464249 + AT_rich Low_complexity Low_complexity 1 21 0 3 650 37 0 0 0 chr2L 8548862 8548899 -14462645 + AT_rich Low_complexity Low_complexity 1 37 0 3 650 27 0 0 0 chr2L 8549580 8549607 -14461937 + AT_rich Low_complexity Low_complexity 1 27 0 3 650 25 31 0 0 chr2L 8551615 8551647 -14459897 + AT_rich Low_complexity Low_complexity 1 32 0 3 650 24 0 0 0 chr2L 8557528 8557552 -14453992 + AT_rich Low_complexity Low_complexity 1 24 0 3 650 218 167 0 16 chr2L 8560496 8560557 -14450987 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 650 51 0 0 0 chr2L 8561325 8561376 -14450168 + AT_rich Low_complexity Low_complexity 1 51 0 3 650 208 163 23 0 chr2L 8561564 8561607 -14449937 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 650 186 43 0 0 chr2L 8563421 8563444 -14448100 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 650 25 65 0 0 chr2L 8563827 8563873 -14447671 + AT_rich Low_complexity Low_complexity 1 46 0 3 650 238 204 0 0 chr2L 8564071 8564120 -14447424 + (CAA)n Simple_repeat Simple_repeat 3 51 0 3 650 22 35 0 0 chr2L 8564456 8564485 -14447059 + AT_rich Low_complexity Low_complexity 1 29 0 3 650 258 95 0 0 chr2L 8565397 8565439 -14446105 + (T)n Simple_repeat Simple_repeat 1 42 0 3 650 237 33 0 0 chr2L 8566465 8566495 -14445049 + (TTC)n Simple_repeat Simple_repeat 1 30 0 3 650 180 158 0 0 chr2L 8569036 8569074 -14442470 + A-rich Low_complexity Low_complexity 1 38 0 3 650 24 53 0 0 chr2L 8569619 8569657 -14441887 + AT_rich Low_complexity Low_complexity 1 38 0 3 650 22 0 0 0 chr2L 8572195 8572217 -14439327 + AT_rich Low_complexity Low_complexity 1 22 0 3 650 23 33 0 0 chr2L 8574392 8574422 -14437122 + AT_rich Low_complexity Low_complexity 1 30 0 3 650 321 174 0 0 chr2L 8576734 8576803 -14434741 + (CTCA)n Simple_repeat Simple_repeat 1 69 0 3 650 231 188 0 0 chr2L 8578394 8578442 -14433102 + (TTA)n Simple_repeat Simple_repeat 2 49 0 3 650 185 163 0 20 chr2L 8579455 8579505 -14432039 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 650 180 125 0 0 chr2L 8579751 8579783 -14431761 + (CACTC)n Simple_repeat Simple_repeat 3 34 0 3 650 21 0 0 0 chr2L 8580089 8580110 -14431434 + AT_rich Low_complexity Low_complexity 1 21 0 3 650 216 154 19 19 chr2L 8581121 8581174 -14430370 + A-rich Low_complexity Low_complexity 2 54 0 3 650 21 36 0 0 chr2L 8583627 8583655 -14427889 + AT_rich Low_complexity Low_complexity 1 28 0 3 650 300 70 0 0 chr2L 8587338 8587381 -14424163 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 650 246 32 0 0 chr2L 8588609 8588640 -14422904 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 650 183 42 0 0 chr2L 8590223 8590247 -14421297 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 650 30 0 0 0 chr2L 8590327 8590357 -14421187 + AT_rich Low_complexity Low_complexity 1 30 0 3 650 27 49 0 0 chr2L 8590650 8590691 -14420853 + AT_rich Low_complexity Low_complexity 1 41 0 3 650 237 167 0 0 chr2L 8592761 8592815 -14418729 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 650 3355 7 7 7 chr2L 8594519 8594933 -14416611 - DM297_LTR LTR Gypsy 0 414 1 3 650 51152 6 0 0 chr2L 8594933 8601102 -14410442 - DM297_I LTR Gypsy 0 6167 1 3 650 3355 7 7 7 chr2L 8601102 8601516 -14410028 - DM297_LTR LTR Gypsy 0 414 1 3 650 186 150 0 0 chr2L 8603296 8603336 -14408208 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 650 251 228 0 0 chr2L 8603927 8603984 -14407560 + T-rich Low_complexity Low_complexity 1 57 0 3 650 192 40 0 0 chr2L 8609745 8609770 -14401774 + (CAAGT)n Simple_repeat Simple_repeat 3 27 0 3 650 218 296 12 0 chr2L 8610639 8610720 -14400824 + (CA)n Simple_repeat Simple_repeat 2 83 0 3 650 186 43 0 0 chr2L 8612128 8612151 -14399393 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 650 336 148 0 0 chr2L 8612220 8612281 -14399263 + (TGG)n Simple_repeat Simple_repeat 3 63 0 3 650 195 100 0 0 chr2L 8612645 8612675 -14398869 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 650 201 154 0 0 chr2L 8612891 8612930 -14398614 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 650 195 42 0 0 chr2L 8615380 8615404 -14396140 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 650 22 0 0 0 chr2L 8616579 8616601 -14394943 + AT_rich Low_complexity Low_complexity 1 22 0 3 650 26 30 0 0 chr2L 8617726 8617759 -14393785 + AT_rich Low_complexity Low_complexity 1 33 0 3 650 22 0 0 0 chr2L 8618235 8618257 -14393287 + AT_rich Low_complexity Low_complexity 1 22 0 3 650 26 0 0 0 chr2L 8620106 8620132 -14391412 + AT_rich Low_complexity Low_complexity 1 26 0 3 650 198 174 0 0 chr2L 8620656 8620702 -14390842 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 650 21 0 0 0 chr2L 8621829 8621850 -14389694 + AT_rich Low_complexity Low_complexity 1 21 0 3 650 26 0 0 0 chr2L 8621981 8622007 -14389537 + AT_rich Low_complexity Low_complexity 1 26 0 3 650 22 35 0 0 chr2L 8624254 8624283 -14387261 + AT_rich Low_complexity Low_complexity 1 29 0 3 650 21 0 0 0 chr2L 8629630 8629651 -14381893 + AT_rich Low_complexity Low_complexity 1 21 0 3 650 23 0 0 0 chr2L 8633224 8633247 -14378297 + AT_rich Low_complexity Low_complexity 1 23 0 3 650 301 226 12 12 chr2L 8633795 8633880 -14377664 + (CATTC)n Simple_repeat Simple_repeat 1 85 0 3 650 25 0 0 0 chr2L 8634220 8634245 -14377299 + AT_rich Low_complexity Low_complexity 1 25 0 3 650 204 67 0 0 chr2L 8636194 8636224 -14375320 + (CAG)n Simple_repeat Simple_repeat 1 30 0 3 650 239 54 0 26 chr2L 8638519 8638557 -14372987 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 650 23 0 0 0 chr2L 8638910 8638933 -14372611 + AT_rich Low_complexity Low_complexity 1 23 0 3 650 240 59 0 0 chr2L 8639854 8639888 -14371656 + (A)n Simple_repeat Simple_repeat 1 34 0 3 650 240 196 0 0 chr2L 8640030 8640081 -14371463 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 650 26 0 0 0 chr2L 8640399 8640425 -14371119 + AT_rich Low_complexity Low_complexity 1 26 0 3 650 29 28 0 0 chr2L 8641553 8641589 -14369955 + AT_rich Low_complexity Low_complexity 1 36 0 3 650 23 54 0 0 chr2L 8643687 8643724 -14367820 + AT_rich Low_complexity Low_complexity 1 37 0 3 650 23 0 0 0 chr2L 8645247 8645270 -14366274 + AT_rich Low_complexity Low_complexity 1 23 0 3 650 213 139 0 0 chr2L 8647720 8647763 -14363781 + (CAGTT)n Simple_repeat Simple_repeat 4 46 0 3 650 23 0 0 0 chr2L 8649217 8649240 -14362304 + AT_rich Low_complexity Low_complexity 1 23 0 3 651 29 0 0 0 chr2L 8655531 8655560 -14355984 + AT_rich Low_complexity Low_complexity 1 29 0 3 651 25 0 0 0 chr2L 8655666 8655691 -14355853 + AT_rich Low_complexity Low_complexity 1 25 0 3 651 29 47 0 0 chr2L 8660372 8660415 -14351129 + AT_rich Low_complexity Low_complexity 1 43 0 3 651 22 0 0 0 chr2L 8662077 8662099 -14349445 + AT_rich Low_complexity Low_complexity 1 22 0 3 651 207 100 0 0 chr2L 8664766 8664796 -14346748 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 651 205 171 0 0 chr2L 8665854 8665889 -14345655 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 651 201 94 0 0 chr2L 8666061 8666093 -14345451 + (CAG)n Simple_repeat Simple_repeat 1 32 0 3 651 235 246 0 0 chr2L 8667997 8668054 -14343490 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 651 22 35 0 0 chr2L 8669378 8669407 -14342137 + AT_rich Low_complexity Low_complexity 1 29 0 3 651 30 45 0 0 chr2L 8669810 8669854 -14341690 + AT_rich Low_complexity Low_complexity 1 44 0 3 651 195 69 0 0 chr2L 8670989 8671018 -14340526 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 651 200 289 0 0 chr2L 8671484 8671536 -14340008 + (CATATA)n Simple_repeat Simple_repeat 4 55 0 3 651 21 57 0 0 chr2L 8671788 8671823 -14339721 + AT_rich Low_complexity Low_complexity 1 35 0 3 651 23 0 0 0 chr2L 8674571 8674594 -14336950 + AT_rich Low_complexity Low_complexity 1 23 0 3 651 21 36 0 0 chr2L 8674684 8674712 -14336832 + AT_rich Low_complexity Low_complexity 1 28 0 3 651 223 180 0 20 chr2L 8675389 8675440 -14336104 + (CCA)n Simple_repeat Simple_repeat 1 50 0 3 651 219 356 0 0 chr2L 8675751 8675866 -14335678 + (CAA)n Simple_repeat Simple_repeat 1 115 0 3 651 24 53 0 0 chr2L 8679485 8679523 -14332021 + AT_rich Low_complexity Low_complexity 1 38 0 3 651 22 0 0 0 chr2L 8685115 8685137 -14326407 + AT_rich Low_complexity Low_complexity 1 22 0 3 651 23 33 0 0 chr2L 8687167 8687197 -14324347 + AT_rich Low_complexity Low_complexity 1 30 0 3 651 21 0 0 0 chr2L 8687326 8687347 -14324197 + AT_rich Low_complexity Low_complexity 1 21 0 3 651 228 179 59 82 chr2L 8689929 8690014 -14321530 - ROO_I LTR Pao -7521 735 653 3 651 23 54 0 0 chr2L 8691418 8691455 -14320089 + AT_rich Low_complexity Low_complexity 1 37 0 3 651 186 103 0 0 chr2L 8691823 8691852 -14319692 + (CAA)n Simple_repeat Simple_repeat 1 29 0 3 651 180 111 0 0 chr2L 8691858 8691885 -14319659 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 651 32 0 0 0 chr2L 8692109 8692141 -14319403 + AT_rich Low_complexity Low_complexity 1 32 0 3 651 22 0 0 0 chr2L 8693077 8693099 -14318445 + AT_rich Low_complexity Low_complexity 1 22 0 3 651 183 100 0 0 chr2L 8693271 8693301 -14318243 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 651 23 0 0 0 chr2L 8694786 8694809 -14316735 + AT_rich Low_complexity Low_complexity 1 23 0 3 651 218 307 10 10 chr2L 8699162 8699264 -14312280 + (TTG)n Simple_repeat Simple_repeat 2 103 0 3 651 218 81 27 0 chr2L 8699435 8699472 -14312072 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 651 264 91 0 0 chr2L 8699988 8700032 -14311512 + (TATCG)n Simple_repeat Simple_repeat 5 48 0 3 651 25 0 0 0 chr2L 8700491 8700516 -14311028 + AT_rich Low_complexity Low_complexity 1 25 0 3 651 180 152 0 0 chr2L 8703426 8703459 -14308085 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 651 28 61 0 0 chr2L 8704227 8704276 -14307268 + AT_rich Low_complexity Low_complexity 1 49 0 3 651 28 48 0 0 chr2L 8705631 8705673 -14305871 + AT_rich Low_complexity Low_complexity 1 42 0 3 651 25 31 0 0 chr2L 8708255 8708287 -14303257 + AT_rich Low_complexity Low_complexity 1 32 0 3 651 193 172 17 33 chr2L 8708570 8708630 -14302914 + (TTG)n Simple_repeat Simple_repeat 1 59 0 3 651 236 111 22 0 chr2L 8709077 8709122 -14302422 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 651 24 0 0 0 chr2L 8710004 8710028 -14301516 + AT_rich Low_complexity Low_complexity 1 24 0 3 651 261 0 0 0 chr2L 8713943 8713972 -14297572 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 651 25 65 0 0 chr2L 8714807 8714853 -14296691 + AT_rich Low_complexity Low_complexity 1 46 0 3 651 207 0 0 0 chr2L 8719912 8719935 -14291609 + (A)n Simple_repeat Simple_repeat 1 23 0 3 651 21 95 0 0 chr2L 8720298 8720361 -14291183 + AT_rich Low_complexity Low_complexity 1 63 0 3 651 34 42 0 0 chr2L 8720379 8720427 -14291117 + AT_rich Low_complexity Low_complexity 1 48 0 3 651 186 43 0 0 chr2L 8721029 8721052 -14290492 + (ATGGTG)n Simple_repeat Simple_repeat 4 26 0 3 651 297 128 0 0 chr2L 8721202 8721249 -14290295 + (CAGT)n Simple_repeat Simple_repeat 4 50 0 3 651 25 31 0 0 chr2L 8721792 8721824 -14289720 + AT_rich Low_complexity Low_complexity 1 32 0 3 651 3766 7 0 0 chr2L 8723169 8723586 -14287958 - TIRANT_LTR LTR Gypsy 0 417 1 3 651 67042 2 0 2 chr2L 8723586 8731072 -14280472 - TIRANT_I LTR Gypsy 0 7692 1 3 651 3766 7 0 0 chr2L 8731072 8731489 -14280055 - TIRANT_LTR LTR Gypsy 0 417 1 3 651 204 67 0 0 chr2L 8733656 8733686 -14277858 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 651 22 70 0 0 chr2L 8736153 8736196 -14275348 + AT_rich Low_complexity Low_complexity 1 43 0 3 651 21 36 0 0 chr2L 8739748 8739776 -14271768 + AT_rich Low_complexity Low_complexity 1 28 0 3 651 30 0 0 0 chr2L 8740782 8740812 -14270732 + AT_rich Low_complexity Low_complexity 1 30 0 3 651 42 20 0 0 chr2L 8742958 8743007 -14268537 + AT_rich Low_complexity Low_complexity 1 49 0 3 651 30 0 0 0 chr2L 8745278 8745308 -14266236 + AT_rich Low_complexity Low_complexity 1 30 0 3 651 216 67 0 0 chr2L 8746233 8746263 -14265281 + (CCCA)n Simple_repeat Simple_repeat 4 33 0 3 651 213 159 0 0 chr2L 8749890 8749934 -14261610 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 651 30 0 0 0 chr2L 8754992 8755022 -14256522 + AT_rich Low_complexity Low_complexity 1 30 0 3 651 22 0 0 0 chr2L 8755365 8755387 -14256157 + AT_rich Low_complexity Low_complexity 1 22 0 3 651 23 0 0 0 chr2L 8757458 8757481 -14254063 + AT_rich Low_complexity Low_complexity 1 23 0 3 651 384 59 0 0 chr2L 8764959 8765010 -14246534 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 651 28 29 0 0 chr2L 8772628 8772663 -14238881 + AT_rich Low_complexity Low_complexity 1 35 0 3 651 1168 62 0 88 chr2L 8776875 8777068 -14234476 + G4_DM LINE Jockey 3681 3856 0 3 651 24 0 0 0 chr2L 8777383 8777407 -14234137 + AT_rich Low_complexity Low_complexity 1 24 0 3 651 22 0 0 0 chr2L 8777675 8777697 -14233847 + AT_rich Low_complexity Low_complexity 1 22 0 3 652 225 196 0 0 chr2L 8783145 8783191 -14228353 + A-rich Low_complexity Low_complexity 1 46 0 3 652 189 107 0 0 chr2L 8787028 8787056 -14224488 + (CAT)n Simple_repeat Simple_repeat 1 28 0 3 652 213 175 0 0 chr2L 8792120 8792160 -14219384 + (ATG)n Simple_repeat Simple_repeat 1 40 0 3 652 215 213 0 0 chr2L 8793210 8793257 -14218287 + GA-rich Low_complexity Low_complexity 1 47 0 3 652 186 118 0 0 chr2L 8794538 8794572 -14216972 + (CAT)n Simple_repeat Simple_repeat 1 34 0 3 652 200 214 0 0 chr2L 8796329 8796371 -14215173 + (CAT)n Simple_repeat Simple_repeat 3 44 0 3 652 21 36 0 0 chr2L 8798586 8798614 -14212930 + AT_rich Low_complexity Low_complexity 1 28 0 3 652 28 48 0 0 chr2L 8798719 8798761 -14212783 + AT_rich Low_complexity Low_complexity 1 42 0 3 652 21 0 0 0 chr2L 8801322 8801343 -14210201 + AT_rich Low_complexity Low_complexity 1 21 0 3 652 35 24 0 0 chr2L 8803922 8803964 -14207580 + AT_rich Low_complexity Low_complexity 1 42 0 3 652 186 43 0 0 chr2L 8804419 8804442 -14207102 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 652 227 226 0 16 chr2L 8804999 8805116 -14206428 + (TTAAA)n Simple_repeat Simple_repeat 1 115 0 3 652 263 28 28 0 chr2L 8805651 8805687 -14205857 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 652 23 0 0 0 chr2L 8806117 8806140 -14205404 + AT_rich Low_complexity Low_complexity 1 23 0 3 652 21 0 0 0 chr2L 8806561 8806582 -14204962 + AT_rich Low_complexity Low_complexity 1 21 0 3 652 21 0 0 0 chr2L 8809501 8809522 -14202022 + AT_rich Low_complexity Low_complexity 1 21 0 3 652 23 33 0 0 chr2L 8814566 8814596 -14196948 + AT_rich Low_complexity Low_complexity 1 30 0 3 652 29 0 0 0 chr2L 8815956 8815985 -14195559 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 29 0 0 0 chr2L 8820264 8820293 -14191251 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 22 35 0 0 chr2L 8820526 8820555 -14190989 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 201 108 0 0 chr2L 8821601 8821638 -14189906 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 652 294 123 0 0 chr2L 8821964 8822021 -14189523 + (TGAA)n Simple_repeat Simple_repeat 2 58 0 3 652 192 77 0 0 chr2L 8822277 8822303 -14189241 + (CAT)n Simple_repeat Simple_repeat 3 28 0 3 652 21 0 0 0 chr2L 8822903 8822924 -14188620 + AT_rich Low_complexity Low_complexity 1 21 0 3 652 254 152 17 0 chr2L 8824946 8825005 -14186539 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 652 230 116 0 23 chr2L 8825775 8825819 -14185725 + (TATCG)n Simple_repeat Simple_repeat 1 43 0 3 652 258 32 0 0 chr2L 8826771 8826802 -14184742 + (CAG)n Simple_repeat Simple_repeat 3 33 0 3 652 216 182 0 0 chr2L 8826883 8826927 -14184617 + (CAG)n Simple_repeat Simple_repeat 1 44 0 3 652 212 143 24 0 chr2L 8827408 8827450 -14184094 + (CAG)n Simple_repeat Simple_repeat 3 45 0 3 652 210 37 0 0 chr2L 8827848 8827875 -14183669 + (CAA)n Simple_repeat Simple_repeat 1 27 0 3 652 279 79 0 0 chr2L 8827903 8827941 -14183603 + (CAG)n Simple_repeat Simple_repeat 3 40 0 3 652 228 209 7 29 chr2L 8828037 8828175 -14183369 + (CAG)n Simple_repeat Simple_repeat 3 137 0 3 652 249 108 0 0 chr2L 8828292 8828329 -14183215 + (CAG)n Simple_repeat Simple_repeat 3 39 0 3 652 255 140 0 0 chr2L 8828479 8828529 -14183015 + (CTG)n Simple_repeat Simple_repeat 3 52 0 3 652 328 191 0 0 chr2L 8828613 8828702 -14182842 + ROO_I LTR Pao 637 725 -7531 3 652 202 213 0 0 chr2L 8828809 8828856 -14182688 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 652 33 43 0 0 chr2L 8829346 8829393 -14182151 + AT_rich Low_complexity Low_complexity 1 47 0 3 652 22 0 0 0 chr2L 8829445 8829467 -14182077 + AT_rich Low_complexity Low_complexity 1 22 0 3 652 180 111 0 0 chr2L 8834388 8834415 -14177129 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 652 249 135 0 0 chr2L 8835251 8835303 -14176241 + (ACTG)n Simple_repeat Simple_repeat 1 52 0 3 652 23 0 0 0 chr2L 8835645 8835668 -14175876 + AT_rich Low_complexity Low_complexity 1 23 0 3 652 215 254 17 0 chr2L 8839201 8839260 -14172284 + (TTTG)n Simple_repeat Simple_repeat 3 62 0 3 652 28 0 0 0 chr2L 8841292 8841320 -14170224 + AT_rich Low_complexity Low_complexity 1 28 0 3 652 52 0 0 0 chr2L 8843257 8843309 -14168235 + AT_rich Low_complexity Low_complexity 1 52 0 3 652 210 37 0 0 chr2L 8849965 8849992 -14161552 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 652 22 70 0 0 chr2L 8854693 8854736 -14156808 + AT_rich Low_complexity Low_complexity 1 43 0 3 652 29 0 0 0 chr2L 8859167 8859196 -14152348 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 219 333 0 0 chr2L 8860680 8860761 -14150783 + (CCCCAG)n Simple_repeat Simple_repeat 2 82 0 3 652 183 162 0 0 chr2L 8861344 8861381 -14150163 + (CCCTG)n Simple_repeat Simple_repeat 4 40 0 3 652 208 226 0 54 chr2L 8868588 8868644 -14142900 + (ATGGTG)n Simple_repeat Simple_repeat 2 54 0 3 652 27 0 0 0 chr2L 8868733 8868760 -14142784 + AT_rich Low_complexity Low_complexity 1 27 0 3 652 23 0 0 0 chr2L 8869219 8869242 -14142302 + AT_rich Low_complexity Low_complexity 1 23 0 3 652 23 0 0 0 chr2L 8872803 8872826 -14138718 + AT_rich Low_complexity Low_complexity 1 23 0 3 652 210 171 0 0 chr2L 8873459 8873500 -14138044 + (AACTG)n Simple_repeat Simple_repeat 1 41 0 3 652 22 0 0 0 chr2L 8875474 8875496 -14136048 + AT_rich Low_complexity Low_complexity 1 22 0 3 652 23 0 0 0 chr2L 8877214 8877237 -14134307 + AT_rich Low_complexity Low_complexity 1 23 0 3 652 26 50 0 0 chr2L 8877343 8877383 -14134161 + AT_rich Low_complexity Low_complexity 1 40 0 3 652 180 0 0 0 chr2L 8878398 8878418 -14133126 + (CCGAA)n Simple_repeat Simple_repeat 4 23 0 3 652 30 0 0 0 chr2L 8879128 8879158 -14132386 + AT_rich Low_complexity Low_complexity 1 30 0 3 652 21 0 0 0 chr2L 8880665 8880686 -14130858 + AT_rich Low_complexity Low_complexity 1 21 0 3 652 200 222 0 0 chr2L 8881405 8881450 -14130094 + (ATG)n Simple_repeat Simple_repeat 1 45 0 3 652 204 40 0 0 chr2L 8881572 8881597 -14129947 + (TCCA)n Simple_repeat Simple_repeat 3 27 0 3 652 25 0 0 0 chr2L 8885934 8885959 -14125585 + AT_rich Low_complexity Low_complexity 1 25 0 3 652 27 49 0 0 chr2L 8886583 8886624 -14124920 + AT_rich Low_complexity Low_complexity 1 41 0 3 652 279 146 0 0 chr2L 8887474 8887529 -14124015 + (CAATC)n Simple_repeat Simple_repeat 5 59 0 3 652 25 75 0 0 chr2L 8888099 8888152 -14123392 + AT_rich Low_complexity Low_complexity 1 53 0 3 652 34 55 0 0 chr2L 8888587 8888642 -14122902 + AT_rich Low_complexity Low_complexity 1 55 0 3 652 24 0 0 0 chr2L 8891889 8891913 -14119631 + AT_rich Low_complexity Low_complexity 1 24 0 3 652 387 125 0 0 chr2L 8892492 8892564 -14118980 + (CAGT)n Simple_repeat Simple_repeat 1 72 0 3 652 209 125 25 0 chr2L 8894665 8894705 -14116839 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 3 652 30 27 0 0 chr2L 8898287 8898324 -14113220 + AT_rich Low_complexity Low_complexity 1 37 0 3 652 200 231 19 0 chr2L 8899490 8899542 -14112002 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 652 21 0 0 0 chr2L 8904040 8904061 -14107483 + AT_rich Low_complexity Low_complexity 1 21 0 3 652 38 68 0 0 chr2L 8904516 8904589 -14106955 + AT_rich Low_complexity Low_complexity 1 73 0 3 652 27 29 0 0 chr2L 8908011 8908045 -14103499 + AT_rich Low_complexity Low_complexity 1 34 0 3 652 225 0 0 0 chr2L 8909120 8909145 -14102399 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3 652 29 28 0 0 chr2L 8909959 8909995 -14101549 + AT_rich Low_complexity Low_complexity 1 36 0 3 652 27 0 0 0 chr2L 8912276 8912303 -14099241 + AT_rich Low_complexity Low_complexity 1 27 0 3 653 24 32 0 0 chr2L 8914579 8914610 -14096934 + AT_rich Low_complexity Low_complexity 1 31 0 3 653 198 0 0 0 chr2L 8915870 8915892 -14095652 + (CAT)n Simple_repeat Simple_repeat 1 22 0 3 653 28 61 0 0 chr2L 8918546 8918595 -14092949 + AT_rich Low_complexity Low_complexity 1 49 0 3 653 22 0 0 0 chr2L 8920484 8920506 -14091038 + AT_rich Low_complexity Low_complexity 1 22 0 3 653 180 0 0 0 chr2L 8920693 8920713 -14090831 + (TTCGG)n Simple_repeat Simple_repeat 1 20 0 3 653 234 91 0 0 chr2L 8921387 8921420 -14090124 + (AACTG)n Simple_repeat Simple_repeat 4 36 0 3 653 22 0 0 0 chr2L 8922733 8922755 -14088789 + AT_rich Low_complexity Low_complexity 1 22 0 3 653 23 33 0 0 chr2L 8924658 8924688 -14086856 + AT_rich Low_complexity Low_complexity 1 30 0 3 653 203 176 0 0 chr2L 8925328 8925362 -14086182 + (CAT)n Simple_repeat Simple_repeat 2 35 0 3 653 31 58 0 0 chr2L 8936069 8936121 -14075423 + AT_rich Low_complexity Low_complexity 1 52 0 3 653 21 71 0 0 chr2L 8936359 8936401 -14075143 + AT_rich Low_complexity Low_complexity 1 42 0 3 653 240 35 0 0 chr2L 8937449 8937478 -14074066 + (CTATA)n Simple_repeat Simple_repeat 2 30 0 3 653 26 0 0 0 chr2L 8940739 8940765 -14070779 + AT_rich Low_complexity Low_complexity 1 26 0 3 653 27 0 0 0 chr2L 8951386 8951413 -14060131 + AT_rich Low_complexity Low_complexity 1 27 0 3 653 288 224 37 68 chr2L 8951982 8952145 -14059399 - XDMR Unknown Unknown -30 331 174 3 653 283 136 0 0 chr2L 8952709 8952753 -14058791 + DNAREP1_DM LINE Penelope 12 55 -539 3 653 318 167 0 0 chr2L 8952814 8952874 -14058670 + DNAREP1_DM LINE Penelope 535 594 0 3 653 22 0 0 0 chr2L 8953047 8953069 -14058475 + AT_rich Low_complexity Low_complexity 1 22 0 3 653 21 0 0 0 chr2L 8953486 8953507 -14058037 + AT_rich Low_complexity Low_complexity 1 21 0 3 653 23 33 0 0 chr2L 8956240 8956270 -14055274 + AT_rich Low_complexity Low_complexity 1 30 0 3 653 40 101 0 0 chr2L 8958535 8958673 -14052871 + AT_rich Low_complexity Low_complexity 1 138 0 3 653 24 0 0 0 chr2L 8959261 8959285 -14052259 + AT_rich Low_complexity Low_complexity 1 24 0 3 653 182 91 30 0 chr2L 8967039 8967072 -14044472 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 653 29 60 0 0 chr2L 8968381 8968431 -14043113 + AT_rich Low_complexity Low_complexity 1 50 0 3 653 27 49 0 0 chr2L 8971201 8971242 -14040302 + AT_rich Low_complexity Low_complexity 1 41 0 3 653 34 24 0 0 chr2L 8973537 8973578 -14037966 + AT_rich Low_complexity Low_complexity 1 41 0 3 653 47 33 0 0 chr2L 8976122 8976183 -14035361 + AT_rich Low_complexity Low_complexity 1 61 0 3 653 21 57 0 0 chr2L 8985857 8985892 -14025652 + AT_rich Low_complexity Low_complexity 1 35 0 3 653 31 58 0 0 chr2L 8987316 8987368 -14024176 + AT_rich Low_complexity Low_complexity 1 52 0 3 653 21 0 0 0 chr2L 8987473 8987494 -14024050 + AT_rich Low_complexity Low_complexity 1 21 0 3 653 30 45 0 0 chr2L 8989053 8989097 -14022447 + AT_rich Low_complexity Low_complexity 1 44 0 3 653 186 43 0 0 chr2L 8991269 8991292 -14020252 + (CATA)n Simple_repeat Simple_repeat 2 24 0 3 653 24 0 0 0 chr2L 8992399 8992423 -14019121 + AT_rich Low_complexity Low_complexity 1 24 0 3 653 3766 0 0 0 chr2L 9000334 9000762 -14010782 - ROO_LTR LTR Pao 0 428 1 3 653 16774 0 1 0 chr2L 9000762 9002733 -14008811 - ROO_I LTR Pao 0 8256 6285 3 653 39540 1 2 0 chr2L 9002719 9007358 -14004186 - ROO_I LTR Pao -3608 4648 1 3 653 3766 0 0 0 chr2L 9007358 9007786 -14003758 - ROO_LTR LTR Pao 0 428 1 3 653 21 57 0 0 chr2L 9010074 9010109 -14001435 + AT_rich Low_complexity Low_complexity 1 35 0 3 653 22 35 0 0 chr2L 9011862 9011891 -13999653 + AT_rich Low_complexity Low_complexity 1 29 0 3 653 23 0 0 0 chr2L 9019918 9019941 -13991603 + AT_rich Low_complexity Low_complexity 1 23 0 3 653 204 97 0 0 chr2L 9021952 9021983 -13989561 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 3 653 228 173 19 0 chr2L 9021984 9022036 -13989508 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 653 25 0 0 0 chr2L 9022321 9022346 -13989198 + AT_rich Low_complexity Low_complexity 1 25 0 3 653 238 258 0 0 chr2L 9023022 9023084 -13988460 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 653 253 289 0 22 chr2L 9023936 9024028 -13987516 + (TTG)n Simple_repeat Simple_repeat 3 92 0 3 653 207 175 0 0 chr2L 9024081 9024121 -13987423 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 653 25 0 0 0 chr2L 9024449 9024474 -13987070 + AT_rich Low_complexity Low_complexity 1 25 0 3 653 211 232 36 0 chr2L 9030684 9030740 -13980804 + (TGGG)n Simple_repeat Simple_repeat 3 60 0 3 653 24 0 0 0 chr2L 9031371 9031395 -13980149 + AT_rich Low_complexity Low_complexity 1 24 0 3 653 216 135 0 0 chr2L 9033333 9033370 -13978174 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 653 189 0 0 0 chr2L 9035676 9035697 -13975847 + (T)n Simple_repeat Simple_repeat 1 21 0 3 653 34 0 0 0 chr2L 9036488 9036522 -13975022 + AT_rich Low_complexity Low_complexity 1 34 0 3 653 246 176 0 0 chr2L 9038812 9038863 -13972681 + (ATG)n Simple_repeat Simple_repeat 2 52 0 3 653 35 41 0 0 chr2L 9039161 9039210 -13972334 + AT_rich Low_complexity Low_complexity 1 49 0 3 654 192 40 0 0 chr2L 9045906 9045931 -13965613 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 654 260 53 26 0 chr2L 9052681 9052719 -13958825 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 654 207 208 21 0 chr2L 9056119 9056167 -13955377 + (CAT)n Simple_repeat Simple_repeat 2 50 0 3 654 21 36 0 0 chr2L 9063929 9063957 -13947587 + AT_rich Low_complexity Low_complexity 1 28 0 3 654 21 36 0 0 chr2L 9064525 9064553 -13946991 + AT_rich Low_complexity Low_complexity 1 28 0 3 654 28 0 0 0 chr2L 9065981 9066009 -13945535 + AT_rich Low_complexity Low_complexity 1 28 0 3 654 27 62 0 0 chr2L 9067707 9067755 -13943789 + AT_rich Low_complexity Low_complexity 1 48 0 3 654 24 0 0 0 chr2L 9067867 9067891 -13943653 + AT_rich Low_complexity Low_complexity 1 24 0 3 654 29 70 0 0 chr2L 9069512 9069569 -13941975 + AT_rich Low_complexity Low_complexity 1 57 0 3 654 29 47 0 0 chr2L 9069689 9069732 -13941812 + AT_rich Low_complexity Low_complexity 1 43 0 3 654 23 68 0 0 chr2L 9070475 9070519 -13941025 + AT_rich Low_complexity Low_complexity 1 44 0 3 654 21 89 0 0 chr2L 9070657 9070713 -13940831 + AT_rich Low_complexity Low_complexity 1 56 0 3 654 21 0 0 0 chr2L 9070958 9070979 -13940565 + AT_rich Low_complexity Low_complexity 1 21 0 3 654 21 0 0 0 chr2L 9075612 9075633 -13935911 + AT_rich Low_complexity Low_complexity 1 21 0 3 654 219 146 0 0 chr2L 9076770 9076811 -13934733 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 3 654 29 0 0 0 chr2L 9076832 9076861 -13934683 + AT_rich Low_complexity Low_complexity 1 29 0 3 654 26 0 0 0 chr2L 9078578 9078604 -13932940 + AT_rich Low_complexity Low_complexity 1 26 0 3 654 189 0 0 0 chr2L 9080188 9080209 -13931335 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 654 25 31 0 0 chr2L 9081995 9082027 -13929517 + AT_rich Low_complexity Low_complexity 1 32 0 3 654 25 0 0 0 chr2L 9082628 9082653 -13928891 + AT_rich Low_complexity Low_complexity 1 25 0 3 654 26 30 0 0 chr2L 9082756 9082789 -13928755 + AT_rich Low_complexity Low_complexity 1 33 0 3 654 186 133 0 0 chr2L 9085472 9085502 -13926042 + (TTCGGG)n Simple_repeat Simple_repeat 5 34 0 3 654 30 27 0 0 chr2L 9085966 9086003 -13925541 + AT_rich Low_complexity Low_complexity 1 37 0 3 654 206 103 86 0 chr2L 9089454 9089512 -13922032 + (TA)n Simple_repeat Simple_repeat 1 63 0 3 654 198 91 0 0 chr2L 9089835 9089868 -13921676 + (A)n Simple_repeat Simple_repeat 1 33 0 3 654 24 0 0 0 chr2L 9089910 9089934 -13921610 + AT_rich Low_complexity Low_complexity 1 24 0 3 654 31 26 0 0 chr2L 9097452 9097490 -13914054 + AT_rich Low_complexity Low_complexity 1 38 0 3 654 26 0 0 0 chr2L 9120087 9120113 -13891431 + AT_rich Low_complexity Low_complexity 1 26 0 3 654 21 36 0 0 chr2L 9121539 9121567 -13889977 + AT_rich Low_complexity Low_complexity 1 28 0 3 654 22 56 0 0 chr2L 9122160 9122196 -13889348 + AT_rich Low_complexity Low_complexity 1 36 0 3 654 38 51 0 0 chr2L 9124696 9124755 -13886789 + AT_rich Low_complexity Low_complexity 1 59 0 3 654 225 183 0 0 chr2L 9127141 9127201 -13884343 + ROO_I LTR Pao 667 726 -7530 3 654 180 125 0 0 chr2L 9127355 9127387 -13884157 + (CGG)n Simple_repeat Simple_repeat 2 33 0 3 654 24 32 0 0 chr2L 9127740 9127771 -13883773 + AT_rich Low_complexity Low_complexity 1 31 0 3 654 216 135 0 0 chr2L 9132814 9132851 -13878693 + (ATG)n Simple_repeat Simple_repeat 1 37 0 3 654 23 33 0 0 chr2L 9133449 9133479 -13878065 + AT_rich Low_complexity Low_complexity 1 30 0 3 654 201 39 0 0 chr2L 9133679 9133705 -13877839 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 654 205 246 0 0 chr2L 9135023 9135088 -13876456 + A-rich Low_complexity Low_complexity 1 65 0 3 654 200 225 0 0 chr2L 9135256 9135296 -13876248 + (CAA)n Simple_repeat Simple_repeat 1 40 0 3 654 22 56 0 0 chr2L 9139211 9139247 -13872297 + AT_rich Low_complexity Low_complexity 1 36 0 3 654 25 31 0 0 chr2L 9141297 9141329 -13870215 + AT_rich Low_complexity Low_complexity 1 32 0 3 654 23 33 0 0 chr2L 9149581 9149611 -13861933 + AT_rich Low_complexity Low_complexity 1 30 0 3 654 27 29 0 0 chr2L 9151902 9151936 -13859608 + AT_rich Low_complexity Low_complexity 1 34 0 3 654 22 35 0 0 chr2L 9152782 9152811 -13858733 + AT_rich Low_complexity Low_complexity 1 29 0 3 654 189 0 0 0 chr2L 9154456 9154477 -13857067 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 654 26 30 0 0 chr2L 9155636 9155669 -13855875 + AT_rich Low_complexity Low_complexity 1 33 0 3 654 40 79 0 0 chr2L 9157570 9157659 -13853885 + AT_rich Low_complexity Low_complexity 1 89 0 3 654 23 33 0 0 chr2L 9158047 9158077 -13853467 + AT_rich Low_complexity Low_complexity 1 30 0 3 654 236 206 0 64 chr2L 9162857 9162935 -13848609 + T-rich Low_complexity Low_complexity 1 73 0 3 654 240 130 0 0 chr2L 9164246 9164292 -13847252 + (CAG)n Simple_repeat Simple_repeat 3 48 0 3 654 26 30 0 0 chr2L 9166666 9166699 -13844845 + AT_rich Low_complexity Low_complexity 1 33 0 3 654 203 271 17 0 chr2L 9167028 9167087 -13844457 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 654 185 0 40 0 chr2L 9167296 9167321 -13844223 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 654 28 61 0 0 chr2L 9167670 9167719 -13843825 + AT_rich Low_complexity Low_complexity 1 49 0 3 654 24 0 0 0 chr2L 9168407 9168431 -13843113 + AT_rich Low_complexity Low_complexity 1 24 0 3 654 23 0 0 0 chr2L 9170948 9170971 -13840573 + AT_rich Low_complexity Low_complexity 1 23 0 3 654 25 0 0 0 chr2L 9171465 9171490 -13840054 + AT_rich Low_complexity Low_complexity 1 25 0 3 654 21 36 0 0 chr2L 9171640 9171668 -13839876 + AT_rich Low_complexity Low_complexity 1 28 0 3 654 192 40 0 0 chr2L 9172010 9172035 -13839509 + (TTA)n Simple_repeat Simple_repeat 2 26 0 3 654 21 0 0 0 chr2L 9172323 9172344 -13839200 + AT_rich Low_complexity Low_complexity 1 21 0 3 654 29 28 0 0 chr2L 9172931 9172967 -13838577 + AT_rich Low_complexity Low_complexity 1 36 0 3 654 23 54 0 0 chr2L 9173256 9173293 -13838251 + AT_rich Low_complexity Low_complexity 1 37 0 3 654 183 42 0 0 chr2L 9173950 9173974 -13837570 + (T)n Simple_repeat Simple_repeat 1 24 0 3 655 29 28 0 0 chr2L 9175648 9175684 -13835860 + AT_rich Low_complexity Low_complexity 1 36 0 3 655 214 162 0 0 chr2L 9176041 9176078 -13835466 + T-rich Low_complexity Low_complexity 3 39 0 3 655 201 196 0 0 chr2L 9176623 9176669 -13834875 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 655 211 220 0 0 chr2L 9177239 9177289 -13834255 + A-rich Low_complexity Low_complexity 1 50 0 3 655 21 0 0 0 chr2L 9179020 9179041 -13832503 + AT_rich Low_complexity Low_complexity 1 21 0 3 655 23 101 0 0 chr2L 9179786 9179865 -13831679 + AT_rich Low_complexity Low_complexity 1 79 0 3 655 212 211 25 62 chr2L 9180721 9180802 -13830742 + T-rich Low_complexity Low_complexity 1 78 0 3 655 190 56 56 0 chr2L 9181810 9181846 -13829698 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 655 216 0 0 0 chr2L 9182506 9182530 -13829014 + (CCTA)n Simple_repeat Simple_repeat 2 25 0 3 655 204 163 0 0 chr2L 9184683 9184726 -13826818 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 655 21 36 0 0 chr2L 9184960 9184988 -13826556 + AT_rich Low_complexity Low_complexity 1 28 0 3 655 206 233 21 43 chr2L 9187510 9187604 -13823940 + T-rich Low_complexity Low_complexity 4 95 0 3 655 21 0 0 0 chr2L 9188611 9188632 -13822912 + AT_rich Low_complexity Low_complexity 1 21 0 3 655 180 111 0 0 chr2L 9190454 9190481 -13821063 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 3 655 183 129 0 0 chr2L 9191706 9191737 -13819807 + (CAA)n Simple_repeat Simple_repeat 1 31 0 3 655 28 29 0 0 chr2L 9193187 9193222 -13818322 + AT_rich Low_complexity Low_complexity 1 35 0 3 655 283 151 40 27 chr2L 9193844 9193919 -13817625 + (CACTC)n Simple_repeat Simple_repeat 1 76 0 3 655 541 200 47 54 chr2L 9194185 9194333 -13817211 - DNAREP1_DM LINE Penelope -152 442 296 3 655 210 37 0 0 chr2L 9195411 9195438 -13816106 + (GA)n Simple_repeat Simple_repeat 1 27 0 3 655 22 0 0 0 chr2L 9196310 9196332 -13815212 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 21 0 0 0 chr2L 9196732 9196753 -13814791 + AT_rich Low_complexity Low_complexity 1 21 0 3 655 21 0 0 0 chr2L 9197881 9197902 -13813642 + AT_rich Low_complexity Low_complexity 1 21 0 3 655 192 77 0 0 chr2L 9201993 9202019 -13809525 + (CTG)n Simple_repeat Simple_repeat 1 26 0 3 655 198 0 0 0 chr2L 9202955 9202977 -13808567 + (GATTG)n Simple_repeat Simple_repeat 3 24 0 3 655 21 71 0 0 chr2L 9205978 9206020 -13805524 + AT_rich Low_complexity Low_complexity 1 42 0 3 655 26 30 0 0 chr2L 9206485 9206518 -13805026 + AT_rich Low_complexity Low_complexity 1 33 0 3 655 21 57 0 0 chr2L 9207290 9207325 -13804219 + AT_rich Low_complexity Low_complexity 1 35 0 3 655 251 171 0 79 chr2L 9207958 9208047 -13803497 + (TTG)n Simple_repeat Simple_repeat 1 82 0 3 655 201 167 0 0 chr2L 9208350 9208386 -13803158 + (TTG)n Simple_repeat Simple_repeat 3 38 0 3 655 219 271 0 14 chr2L 9208931 9209002 -13802542 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 655 25 31 0 0 chr2L 9211356 9211388 -13800156 + AT_rich Low_complexity Low_complexity 1 32 0 3 655 29 28 0 0 chr2L 9212213 9212249 -13799295 + AT_rich Low_complexity Low_complexity 1 36 0 3 655 22 0 0 0 chr2L 9215119 9215141 -13796403 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 204 111 0 0 chr2L 9215721 9215757 -13795787 + (T)n Simple_repeat Simple_repeat 1 36 0 3 655 213 119 0 0 chr2L 9216821 9216863 -13794681 + (ACCG)n Simple_repeat Simple_repeat 2 43 0 3 655 212 167 0 0 chr2L 9217689 9217731 -13793813 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 655 21 36 0 0 chr2L 9217928 9217956 -13793588 + AT_rich Low_complexity Low_complexity 1 28 0 3 655 42658 1 0 0 chr2L 9218028 9222748 -13788796 - DOC LINE Jockey 0 4725 7 3 655 192 77 0 0 chr2L 9223071 9223097 -13788447 + (TATG)n Simple_repeat Simple_repeat 3 28 0 3 655 191 36 36 0 chr2L 9224559 9224587 -13786957 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 655 22 35 0 0 chr2L 9225042 9225071 -13786473 + AT_rich Low_complexity Low_complexity 1 29 0 3 655 207 255 0 0 chr2L 9225447 9225498 -13786046 + G-rich Low_complexity Low_complexity 2 52 0 3 655 26 98 0 0 chr2L 9225881 9225963 -13785581 + AT_rich Low_complexity Low_complexity 1 82 0 3 655 255 61 0 0 chr2L 9226398 9226431 -13785113 + (CATAC)n Simple_repeat Simple_repeat 1 33 0 3 655 234 0 0 0 chr2L 9226745 9226771 -13784773 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 655 21 57 0 0 chr2L 9227745 9227780 -13783764 + AT_rich Low_complexity Low_complexity 1 35 0 3 655 219 69 0 0 chr2L 9228481 9228510 -13783034 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 655 203 194 0 0 chr2L 9228716 9228752 -13782792 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 655 29 0 0 0 chr2L 9229443 9229472 -13782072 + AT_rich Low_complexity Low_complexity 1 29 0 3 655 21 76 0 37 chr2L 9231420 9231502 -13780042 + AT_rich Low_complexity Low_complexity 1 79 0 3 655 192 125 0 0 chr2L 9231879 9231911 -13779633 + (A)n Simple_repeat Simple_repeat 1 32 0 3 655 26 0 0 0 chr2L 9232351 9232377 -13779167 + AT_rich Low_complexity Low_complexity 1 26 0 3 655 41 72 0 0 chr2L 9233468 9233551 -13777993 + AT_rich Low_complexity Low_complexity 1 83 0 3 655 283 206 0 0 chr2L 9234050 9234118 -13777426 + ROO_I LTR Pao 662 729 -7527 3 655 323 131 11 45 chr2L 9234343 9234431 -13777113 + ROO_I LTR Pao 639 723 -7533 3 655 246 150 0 77 chr2L 9234387 9234452 -13777092 + Gypsy11_I LTR Gypsy 520 579 -2945 3 655 24 32 0 0 chr2L 9234938 9234969 -13776575 + AT_rich Low_complexity Low_complexity 1 31 0 3 655 35 24 0 0 chr2L 9235916 9235958 -13775586 + AT_rich Low_complexity Low_complexity 1 42 0 3 655 180 0 0 0 chr2L 9237736 9237756 -13773788 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 655 23 0 0 0 chr2L 9238566 9238589 -13772955 + AT_rich Low_complexity Low_complexity 1 23 0 3 655 232 154 0 44 chr2L 9239011 9239079 -13772465 + (CAA)n Simple_repeat Simple_repeat 2 66 0 3 655 192 77 0 0 chr2L 9240584 9240610 -13770934 + (CAG)n Simple_repeat Simple_repeat 3 28 0 3 655 202 234 0 41 chr2L 9241026 9241075 -13770469 + (CAG)n Simple_repeat Simple_repeat 1 47 0 3 655 222 193 0 0 chr2L 9241128 9241185 -13770359 + (CAG)n Simple_repeat Simple_repeat 1 57 0 3 655 345 100 0 0 chr2L 9242086 9242136 -13769408 + (CAG)n Simple_repeat Simple_repeat 2 51 0 3 655 201 331 0 61 chr2L 9242154 9242318 -13769226 + (CAG)n Simple_repeat Simple_repeat 1 154 0 3 655 313 175 0 30 chr2L 9242511 9242611 -13768933 + (CAG)n Simple_repeat Simple_repeat 1 97 0 3 655 201 178 0 0 chr2L 9242639 9242684 -13768860 + (CAG)n Simple_repeat Simple_repeat 3 47 0 3 655 239 93 23 0 chr2L 9244159 9244202 -13767342 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 655 453 90 0 0 chr2L 9244330 9244397 -13767147 + (CAG)n Simple_repeat Simple_repeat 1 67 0 3 655 202 302 0 0 chr2L 9244450 9244513 -13767031 + (CGG)n Simple_repeat Simple_repeat 2 64 0 3 655 21 36 0 0 chr2L 9245049 9245077 -13766467 + AT_rich Low_complexity Low_complexity 1 28 0 3 655 23 68 0 0 chr2L 9245726 9245770 -13765774 + AT_rich Low_complexity Low_complexity 1 44 0 3 655 34 24 0 0 chr2L 9245955 9245996 -13765548 + AT_rich Low_complexity Low_complexity 1 41 0 3 655 29 47 0 0 chr2L 9247122 9247165 -13764379 + AT_rich Low_complexity Low_complexity 1 43 0 3 655 29 28 0 0 chr2L 9247185 9247221 -13764323 + AT_rich Low_complexity Low_complexity 1 36 0 3 655 29 28 0 0 chr2L 9247389 9247425 -13764119 + AT_rich Low_complexity Low_complexity 1 36 0 3 655 28 29 0 0 chr2L 9247616 9247651 -13763893 + AT_rich Low_complexity Low_complexity 1 35 0 3 655 25 0 0 0 chr2L 9247825 9247850 -13763694 + AT_rich Low_complexity Low_complexity 1 25 0 3 655 222 37 0 0 chr2L 9250061 9250088 -13761456 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 655 28 0 0 0 chr2L 9250089 9250117 -13761427 + AT_rich Low_complexity Low_complexity 1 28 0 3 655 255 133 0 0 chr2L 9255251 9255296 -13756248 + (TCCA)n Simple_repeat Simple_repeat 2 46 0 3 655 23 0 0 0 chr2L 9259142 9259165 -13752379 + AT_rich Low_complexity Low_complexity 1 23 0 3 655 21 0 0 0 chr2L 9259590 9259611 -13751933 + AT_rich Low_complexity Low_complexity 1 21 0 3 655 52 0 0 0 chr2L 9259836 9259888 -13751656 + AT_rich Low_complexity Low_complexity 1 52 0 3 655 253 234 16 0 chr2L 9261872 9261936 -13749608 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 655 22 0 0 0 chr2L 9262276 9262298 -13749246 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 21 0 0 0 chr2L 9273460 9273481 -13738063 + AT_rich Low_complexity Low_complexity 1 21 0 3 655 228 35 0 0 chr2L 9275482 9275511 -13736033 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 655 21 36 0 0 chr2L 9284386 9284414 -13727130 + AT_rich Low_complexity Low_complexity 1 28 0 4 655 308 53 0 0 chr2L 9284613 9284651 -13726893 - DNAREP1_DM LINE Penelope -5 589 552 4 655 195 42 0 0 chr2L 9288919 9288943 -13722601 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 655 180 77 0 0 chr2L 9291245 9291271 -13720273 + (CAA)n Simple_repeat Simple_repeat 3 28 0 4 655 212 154 0 0 chr2L 9291411 9291450 -13720094 + (CTA)n Simple_repeat Simple_repeat 2 40 0 4 655 22 56 0 0 chr2L 9292953 9292989 -13718555 + AT_rich Low_complexity Low_complexity 1 36 0 4 655 180 135 0 0 chr2L 9294082 9294119 -13717425 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 655 33 66 0 0 chr2L 9294605 9294666 -13716878 + AT_rich Low_complexity Low_complexity 1 61 0 4 655 206 232 0 18 chr2L 9300084 9300141 -13711403 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 655 22 70 0 0 chr2L 9302093 9302136 -13709408 + AT_rich Low_complexity Low_complexity 1 43 0 4 655 32 0 0 0 chr2L 9304276 9304308 -13707236 + AT_rich Low_complexity Low_complexity 1 32 0 4 655 27 0 0 0 chr2L 9304977 9305004 -13706540 + AT_rich Low_complexity Low_complexity 1 27 0 4 656 210 171 0 0 chr2L 9306278 9306313 -13705231 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 4 656 25 31 0 0 chr2L 9309229 9309261 -13702283 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 186 43 0 0 chr2L 9313439 9313462 -13698082 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 656 385 193 11 22 chr2L 9314645 9314735 -13696809 - DNAREP1_DM LINE Penelope 0 594 506 4 656 353 172 0 0 chr2L 9314828 9314886 -13696658 - DNAREP1_DM LINE Penelope -535 59 2 4 656 201 39 0 0 chr2L 9316255 9316281 -13695263 + (CAT)n Simple_repeat Simple_repeat 3 28 0 4 656 25 31 0 0 chr2L 9316372 9316404 -13695140 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 207 236 36 0 chr2L 9317634 9317689 -13693855 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 4 656 31 26 0 0 chr2L 9320430 9320468 -13691076 + AT_rich Low_complexity Low_complexity 1 38 0 4 656 21 0 0 0 chr2L 9320943 9320964 -13690580 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 21 0 0 0 chr2L 9322454 9322475 -13689069 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 201 74 0 0 chr2L 9323354 9323381 -13688163 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 656 22 0 0 0 chr2L 9325577 9325599 -13685945 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 223 259 0 0 chr2L 9327205 9327263 -13684281 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 656 25 31 0 0 chr2L 9330494 9330526 -13681018 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 210 91 0 0 chr2L 9331518 9331551 -13679993 + (CAT)n Simple_repeat Simple_repeat 1 33 0 4 656 32 75 0 0 chr2L 9334081 9334148 -13677396 + AT_rich Low_complexity Low_complexity 1 67 0 4 656 354 23 0 0 chr2L 9335180 9335223 -13676321 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 656 212 238 0 0 chr2L 9340845 9340887 -13670657 + (CGA)n Simple_repeat Simple_repeat 1 42 0 4 656 29 0 0 0 chr2L 9341202 9341231 -13670313 + AT_rich Low_complexity Low_complexity 1 29 0 4 656 31 26 0 0 chr2L 9341695 9341733 -13669811 + AT_rich Low_complexity Low_complexity 1 38 0 4 656 22 56 0 0 chr2L 9342231 9342267 -13669277 + AT_rich Low_complexity Low_complexity 1 36 0 4 656 21 0 0 0 chr2L 9352119 9352140 -13659404 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 22 0 0 0 chr2L 9352543 9352565 -13658979 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 26 0 0 0 chr2L 9355673 9355699 -13655845 + AT_rich Low_complexity Low_complexity 1 26 0 4 656 25 31 0 0 chr2L 9357536 9357568 -13653976 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 183 42 0 0 chr2L 9359562 9359586 -13651958 + (T)n Simple_repeat Simple_repeat 1 24 0 4 656 25 0 0 0 chr2L 9366007 9366032 -13645512 + AT_rich Low_complexity Low_complexity 1 25 0 4 656 206 81 27 0 chr2L 9369837 9369874 -13641670 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 656 23 33 0 0 chr2L 9370320 9370350 -13641194 + AT_rich Low_complexity Low_complexity 1 30 0 4 656 24 0 0 0 chr2L 9374177 9374201 -13637343 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 24 0 0 0 chr2L 9375531 9375555 -13635989 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 208 217 0 0 chr2L 9377857 9377903 -13633641 + (CGG)n Simple_repeat Simple_repeat 1 46 0 4 656 21 0 0 0 chr2L 9379183 9379204 -13632340 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 254 203 17 17 chr2L 9379260 9379320 -13632224 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 656 197 83 0 27 chr2L 9382373 9382410 -13629134 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 656 21 0 0 0 chr2L 9382742 9382763 -13628781 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 281 146 21 0 chr2L 9382907 9382955 -13628589 - DNAREP1_DM LINE Penelope -100 494 446 4 656 45 0 0 0 chr2L 9387424 9387469 -13624075 + AT_rich Low_complexity Low_complexity 1 45 0 4 656 21 0 0 0 chr2L 9387916 9387937 -13623607 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 22 35 0 0 chr2L 9388847 9388876 -13622668 + AT_rich Low_complexity Low_complexity 1 29 0 4 656 21 36 0 0 chr2L 9390183 9390211 -13621333 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 26963 4 0 0 chr2L 9393562 9396462 -13615082 - LINEJ1_DM LINE Jockey -4 5016 2118 4 656 21 0 0 0 chr2L 9397069 9397090 -13614454 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 25 31 0 0 chr2L 9400443 9400475 -13611069 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 180 182 0 0 chr2L 9401354 9401398 -13610146 + A-rich Low_complexity Low_complexity 1 44 0 4 656 219 69 0 0 chr2L 9401876 9401905 -13609639 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 656 25 0 0 0 chr2L 9404115 9404140 -13607404 + AT_rich Low_complexity Low_complexity 1 25 0 4 656 21 36 0 0 chr2L 9404448 9404476 -13607068 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 210 176 0 0 chr2L 9405121 9405172 -13606372 + (ATG)n Simple_repeat Simple_repeat 1 51 0 4 656 32 81 0 0 chr2L 9406767 9406841 -13604703 + AT_rich Low_complexity Low_complexity 1 74 0 4 656 246 128 0 0 chr2L 9407292 9407331 -13604213 + (ACTG)n Simple_repeat Simple_repeat 2 40 0 4 656 29 47 0 0 chr2L 9409295 9409338 -13602206 + AT_rich Low_complexity Low_complexity 1 43 0 4 656 24 0 0 0 chr2L 9410300 9410324 -13601220 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 22 0 0 0 chr2L 9415751 9415773 -13595771 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 50 0 0 0 chr2L 9418346 9418396 -13593148 + AT_rich Low_complexity Low_complexity 1 50 0 4 656 27 62 0 0 chr2L 9419286 9419334 -13592210 + AT_rich Low_complexity Low_complexity 1 48 0 4 656 267 114 0 0 chr2L 9419608 9419652 -13591892 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 656 39 22 0 0 chr2L 9420152 9420198 -13591346 + AT_rich Low_complexity Low_complexity 1 46 0 4 656 25 0 0 0 chr2L 9420913 9420938 -13590606 + AT_rich Low_complexity Low_complexity 1 25 0 4 656 22 56 0 0 chr2L 9421010 9421046 -13590498 + AT_rich Low_complexity Low_complexity 1 36 0 4 656 234 62 0 0 chr2L 9421437 9421469 -13590075 + (CAGG)n Simple_repeat Simple_repeat 3 34 0 4 656 192 40 0 0 chr2L 9421532 9421557 -13589987 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 656 39 68 0 0 chr2L 9422642 9422716 -13588828 + AT_rich Low_complexity Low_complexity 1 74 0 4 656 21 0 0 0 chr2L 9425650 9425671 -13585873 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 26 0 0 0 chr2L 9427801 9427827 -13583717 + AT_rich Low_complexity Low_complexity 1 26 0 4 656 28 0 0 0 chr2L 9427950 9427978 -13583566 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 21 0 0 0 chr2L 9431148 9431169 -13580375 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 41 108 0 0 chr2L 9431185 9431352 -13580192 + AT_rich Low_complexity Low_complexity 1 167 0 4 656 24 32 0 0 chr2L 9435274 9435305 -13576239 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 32 0 0 0 chr2L 9435791 9435823 -13575721 + AT_rich Low_complexity Low_complexity 1 32 0 4 657 216 200 0 0 chr2L 9437546 9437596 -13573948 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 657 202 118 0 29 chr2L 9437985 9438020 -13573524 + (CATA)n Simple_repeat Simple_repeat 4 37 0 4 657 203 259 0 0 chr2L 9439224 9439278 -13572266 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 4 657 21 82 0 0 chr2L 9439770 9439819 -13571725 + AT_rich Low_complexity Low_complexity 1 49 0 4 657 249 139 0 0 chr2L 9441788 9441831 -13569713 + (CACTC)n Simple_repeat Simple_repeat 4 46 0 4 657 206 32 32 0 chr2L 9444318 9444349 -13567195 + (CTATA)n Simple_repeat Simple_repeat 4 35 0 4 657 22 0 0 0 chr2L 9449506 9449528 -13562016 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 213 121 0 0 chr2L 9450913 9450946 -13560598 + (CATA)n Simple_repeat Simple_repeat 4 36 0 4 657 201 167 0 0 chr2L 9459561 9459597 -13551947 + A-rich Low_complexity Low_complexity 1 36 0 4 657 35 88 0 0 chr2L 9463019 9463110 -13548434 + AT_rich Low_complexity Low_complexity 1 91 0 4 657 215 114 23 0 chr2L 9463794 9463838 -13547706 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 657 201 147 0 0 chr2L 9466899 9466933 -13544611 + (CACTT)n Simple_repeat Simple_repeat 3 36 0 4 657 449 34 17 0 chr2L 9467587 9467646 -13543898 + (TTTCC)n Simple_repeat Simple_repeat 1 60 0 4 657 22 0 0 0 chr2L 9468208 9468230 -13543314 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 22 35 0 0 chr2L 9470180 9470209 -13541335 + AT_rich Low_complexity Low_complexity 1 29 0 4 657 186 133 0 0 chr2L 9470766 9470796 -13540748 + (ACTG)n Simple_repeat Simple_repeat 3 32 0 4 657 194 105 26 0 chr2L 9471536 9471574 -13539970 + (TAAAAA)n Simple_repeat Simple_repeat 5 43 0 4 657 26 0 0 0 chr2L 9471893 9471919 -13539625 + AT_rich Low_complexity Low_complexity 1 26 0 4 657 255 61 0 0 chr2L 9474165 9474198 -13537346 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 657 300 53 0 0 chr2L 9474410 9474448 -13537096 + (CAT)n Simple_repeat Simple_repeat 2 39 0 4 657 21 57 0 0 chr2L 9474757 9474792 -13536752 + AT_rich Low_complexity Low_complexity 1 35 0 4 657 27 0 0 0 chr2L 9474964 9474991 -13536553 + AT_rich Low_complexity Low_complexity 1 27 0 4 657 189 0 0 0 chr2L 9475130 9475151 -13536393 + (A)n Simple_repeat Simple_repeat 1 21 0 4 657 228 143 0 0 chr2L 9475577 9475619 -13535925 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 657 224 156 22 0 chr2L 9475853 9475898 -13535646 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 657 183 100 0 0 chr2L 9475944 9475974 -13535570 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 657 186 43 0 0 chr2L 9476214 9476237 -13535307 + (GGAA)n Simple_repeat Simple_repeat 4 26 0 4 657 189 0 0 0 chr2L 9476947 9476968 -13534576 + (GA)n Simple_repeat Simple_repeat 2 22 0 4 657 221 163 0 0 chr2L 9477774 9477817 -13533727 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 657 21 0 0 0 chr2L 9478021 9478042 -13533502 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 189 0 0 0 chr2L 9478505 9478526 -13533018 + (A)n Simple_repeat Simple_repeat 1 21 0 4 657 228 143 0 0 chr2L 9478952 9478994 -13532550 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 657 224 156 22 0 chr2L 9479228 9479273 -13532271 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 657 183 100 0 0 chr2L 9479319 9479349 -13532195 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 657 186 43 0 0 chr2L 9479589 9479612 -13531932 + (GGAA)n Simple_repeat Simple_repeat 4 26 0 4 657 189 0 0 0 chr2L 9480322 9480343 -13531201 + (GA)n Simple_repeat Simple_repeat 2 22 0 4 657 221 163 0 0 chr2L 9481149 9481192 -13530352 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 657 21 0 0 0 chr2L 9481396 9481417 -13530127 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 189 0 0 0 chr2L 9481880 9481901 -13529643 + (A)n Simple_repeat Simple_repeat 1 21 0 4 657 228 143 0 0 chr2L 9482327 9482369 -13529175 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 657 224 156 22 0 chr2L 9482603 9482648 -13528896 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 657 183 100 0 0 chr2L 9482694 9482724 -13528820 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 657 186 43 0 0 chr2L 9482964 9482987 -13528557 + (GGAA)n Simple_repeat Simple_repeat 4 26 0 4 657 189 0 0 0 chr2L 9483697 9483718 -13527826 + (GA)n Simple_repeat Simple_repeat 2 22 0 4 657 221 163 0 0 chr2L 9484524 9484567 -13526977 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 657 21 0 0 0 chr2L 9484771 9484792 -13526752 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 23 0 0 0 chr2L 9487687 9487710 -13523834 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 21 82 0 0 chr2L 9488838 9488887 -13522657 + AT_rich Low_complexity Low_complexity 1 49 0 4 657 22 35 0 0 chr2L 9488945 9488974 -13522570 + AT_rich Low_complexity Low_complexity 1 29 0 4 657 240 35 0 0 chr2L 9489550 9489579 -13521965 + (CAT)n Simple_repeat Simple_repeat 1 29 0 4 657 46 33 0 0 chr2L 9491141 9491201 -13520343 + AT_rich Low_complexity Low_complexity 1 60 0 4 657 225 97 46 46 chr2L 9491533 9491598 -13519946 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 657 216 262 38 0 chr2L 9491742 9491822 -13519722 + (TA)n Simple_repeat Simple_repeat 2 84 0 4 657 21 0 0 0 chr2L 9494650 9494671 -13516873 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 23 0 0 0 chr2L 9501163 9501186 -13510358 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 210 268 0 14 chr2L 9501448 9501520 -13510024 + T-rich Low_complexity Low_complexity 6 76 0 4 657 192 40 0 0 chr2L 9502830 9502855 -13508689 + (T)n Simple_repeat Simple_repeat 1 25 0 4 657 501 139 0 0 chr2L 9503145 9503224 -13508320 - DNAREP1_DM LINE Penelope -5 589 511 4 657 559 203 0 24 chr2L 9503224 9503350 -13508194 - DNAREP1_DM LINE Penelope -471 123 1 4 657 21 0 0 0 chr2L 9503350 9503371 -13508173 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 25 51 0 0 chr2L 9505878 9505917 -13505627 + AT_rich Low_complexity Low_complexity 1 39 0 4 657 21 0 0 0 chr2L 9508307 9508328 -13503216 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 21 0 0 0 chr2L 9509665 9509686 -13501858 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 21 36 0 0 chr2L 9514635 9514663 -13496881 + AT_rich Low_complexity Low_complexity 1 28 0 4 657 24 0 0 0 chr2L 9519366 9519390 -13492154 + AT_rich Low_complexity Low_complexity 1 24 0 4 657 213 94 0 0 chr2L 9521725 9521757 -13489787 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 657 21 0 0 0 chr2L 9522590 9522611 -13488933 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 195 42 0 0 chr2L 9523075 9523099 -13488445 + (GA)n Simple_repeat Simple_repeat 1 24 0 4 657 264 59 0 0 chr2L 9525063 9525097 -13486447 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 4 657 216 204 0 0 chr2L 9527789 9527833 -13483711 + (CAACT)n Simple_repeat Simple_repeat 2 45 0 4 657 203 167 0 0 chr2L 9533394 9533430 -13478114 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 657 31 44 0 0 chr2L 9540231 9540276 -13471268 + AT_rich Low_complexity Low_complexity 1 45 0 4 657 37 39 0 0 chr2L 9542444 9542495 -13469049 + AT_rich Low_complexity Low_complexity 1 51 0 4 657 607 65 81 61 chr2L 9547572 9547671 -13463873 + DNAREP1_DM LINE Penelope 398 498 -96 4 657 23 68 0 0 chr2L 9549714 9549758 -13461786 + AT_rich Low_complexity Low_complexity 1 44 0 4 657 207 0 0 0 chr2L 9550910 9550933 -13460611 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 657 220 250 0 0 chr2L 9552319 9552367 -13459177 + (CGG)n Simple_repeat Simple_repeat 2 49 0 4 657 413 229 0 25 chr2L 9552469 9552590 -13458954 - ROO_I LTR Pao -7514 742 625 4 657 189 74 0 0 chr2L 9552754 9552781 -13458763 + (CTG)n Simple_repeat Simple_repeat 1 27 0 4 657 186 43 0 0 chr2L 9552942 9552965 -13458579 + (CTG)n Simple_repeat Simple_repeat 3 25 0 4 657 25 0 0 0 chr2L 9554606 9554631 -13456913 + AT_rich Low_complexity Low_complexity 1 25 0 4 657 309 118 0 0 chr2L 9555861 9555912 -13455632 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 657 203 61 30 0 chr2L 9556165 9556198 -13455346 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 657 21 0 0 0 chr2L 9557075 9557096 -13454448 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 186 150 0 0 chr2L 9559303 9559343 -13452201 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 657 21 0 0 0 chr2L 9559560 9559581 -13451963 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 21 0 0 0 chr2L 9559796 9559817 -13451727 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 21 0 0 0 chr2L 9564620 9564641 -13446903 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 21 71 0 0 chr2L 9564683 9564725 -13446819 + AT_rich Low_complexity Low_complexity 1 42 0 4 658 226 242 0 31 chr2L 9569343 9569407 -13442137 + (TTG)n Simple_repeat Simple_repeat 1 62 0 4 658 200 215 0 44 chr2L 9569517 9569585 -13441959 + T-rich Low_complexity Low_complexity 2 66 0 4 658 273 189 44 11 chr2L 9570598 9570689 -13440855 - ROO_I LTR Pao -7512 744 651 4 658 243 262 0 0 chr2L 9570952 9571013 -13440531 + (CAA)n Simple_repeat Simple_repeat 3 63 0 4 658 222 116 0 0 chr2L 9571092 9571135 -13440409 + (CAGAA)n Simple_repeat Simple_repeat 3 45 0 4 658 30 27 0 0 chr2L 9578538 9578575 -13432969 + AT_rich Low_complexity Low_complexity 1 37 0 4 658 192 40 0 0 chr2L 9584519 9584544 -13427000 + (AGTTG)n Simple_repeat Simple_repeat 4 28 0 4 658 29 28 0 0 chr2L 9586157 9586193 -13425351 + AT_rich Low_complexity Low_complexity 1 36 0 4 658 22 70 0 0 chr2L 9586861 9586904 -13424640 + AT_rich Low_complexity Low_complexity 1 43 0 4 658 21 0 0 0 chr2L 9588208 9588229 -13423315 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 264 122 0 0 chr2L 9588435 9588476 -13423068 + (ATG)n Simple_repeat Simple_repeat 1 41 0 4 658 32 0 0 0 chr2L 9589622 9589654 -13421890 + AT_rich Low_complexity Low_complexity 1 32 0 4 658 27 73 0 0 chr2L 9594989 9595044 -13416500 + AT_rich Low_complexity Low_complexity 1 55 0 4 658 222 37 0 0 chr2L 9596267 9596294 -13415250 + (ACTG)n Simple_repeat Simple_repeat 3 29 0 4 658 22 0 0 0 chr2L 9596837 9596859 -13414685 + AT_rich Low_complexity Low_complexity 1 22 0 4 658 235 292 0 0 chr2L 9597120 9597192 -13414352 + (TTG)n Simple_repeat Simple_repeat 2 73 0 4 658 345 131 0 0 chr2L 9598197 9598258 -13413286 + (TGGA)n Simple_repeat Simple_repeat 1 61 0 4 658 29 0 0 0 chr2L 9601946 9601975 -13409569 + AT_rich Low_complexity Low_complexity 1 29 0 4 658 27 81 0 0 chr2L 9603355 9603417 -13408127 + AT_rich Low_complexity Low_complexity 1 62 0 4 658 27 81 0 0 chr2L 9603524 9603586 -13407958 + AT_rich Low_complexity Low_complexity 1 62 0 4 658 256 83 20 20 chr2L 9603690 9603739 -13407805 + (ACTG)n Simple_repeat Simple_repeat 1 49 0 4 658 25 0 0 0 chr2L 9605158 9605183 -13406361 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 21 0 0 0 chr2L 9606603 9606624 -13404920 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 213 121 0 0 chr2L 9607103 9607136 -13404408 + (CAG)n Simple_repeat Simple_repeat 2 34 0 4 658 272 200 0 30 chr2L 9612427 9612494 -13399050 + (CCA)n Simple_repeat Simple_repeat 2 66 0 4 658 26 0 0 0 chr2L 9616455 9616481 -13395063 + AT_rich Low_complexity Low_complexity 1 26 0 4 658 207 114 0 0 chr2L 9617248 9617283 -13394261 + (CCA)n Simple_repeat Simple_repeat 2 36 0 4 658 23 0 0 0 chr2L 9618416 9618439 -13393105 + AT_rich Low_complexity Low_complexity 1 23 0 4 658 46 19 0 0 chr2L 9623542 9623595 -13387949 + AT_rich Low_complexity Low_complexity 1 53 0 4 658 29 0 0 0 chr2L 9627717 9627746 -13383798 + AT_rich Low_complexity Low_complexity 1 29 0 4 658 23 33 0 0 chr2L 9628412 9628442 -13383102 + AT_rich Low_complexity Low_complexity 1 30 0 4 658 21 36 0 0 chr2L 9633940 9633968 -13377576 + AT_rich Low_complexity Low_complexity 1 28 0 4 658 202 229 0 0 chr2L 9641033 9641081 -13370463 + T-rich Low_complexity Low_complexity 1 48 0 4 658 231 36 0 0 chr2L 9645803 9645831 -13365713 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 4 658 27 29 0 0 chr2L 9653781 9653815 -13357729 + AT_rich Low_complexity Low_complexity 1 34 0 4 658 189 0 0 0 chr2L 9656159 9656180 -13355364 + (CAG)n Simple_repeat Simple_repeat 3 23 0 4 658 231 88 0 0 chr2L 9658005 9658039 -13353505 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 4 658 219 152 0 0 chr2L 9660394 9660440 -13351104 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 658 200 111 0 27 chr2L 9661961 9661998 -13349546 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 4 658 444 128 0 0 chr2L 9667738 9667816 -13343728 + (CAG)n Simple_repeat Simple_repeat 3 80 0 4 658 225 0 0 0 chr2L 9669797 9669822 -13341722 + (ATG)n Simple_repeat Simple_repeat 1 25 0 4 658 21 0 0 0 chr2L 9671494 9671515 -13340029 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 258 32 0 0 chr2L 9671523 9671554 -13339990 + (CAA)n Simple_repeat Simple_repeat 1 31 0 4 658 30 0 0 0 chr2L 9672095 9672125 -13339419 + AT_rich Low_complexity Low_complexity 1 30 0 4 658 26 30 0 0 chr2L 9672218 9672251 -13339293 + AT_rich Low_complexity Low_complexity 1 33 0 4 658 24 32 0 0 chr2L 9673995 9674026 -13337518 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 180 125 0 0 chr2L 9675658 9675690 -13335854 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 658 203 175 0 0 chr2L 9677360 9677400 -13334144 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 4 658 21 0 0 0 chr2L 9678448 9678469 -13333075 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 195 42 0 0 chr2L 9680015 9680039 -13331505 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 658 22 0 0 0 chr2L 9680206 9680228 -13331316 + AT_rich Low_complexity Low_complexity 1 22 0 4 658 217 83 41 20 chr2L 9682450 9682499 -13329045 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 4 658 240 100 0 0 chr2L 9682540 9682580 -13328964 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 658 24 0 0 0 chr2L 9683066 9683090 -13328454 + AT_rich Low_complexity Low_complexity 1 24 0 4 658 209 128 21 0 chr2L 9683144 9683191 -13328353 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 658 23 0 0 0 chr2L 9684720 9684743 -13326801 + AT_rich Low_complexity Low_complexity 1 23 0 4 658 22 0 0 0 chr2L 9686095 9686117 -13325427 + AT_rich Low_complexity Low_complexity 1 22 0 4 658 25 31 0 0 chr2L 9686882 9686914 -13324630 + AT_rich Low_complexity Low_complexity 1 32 0 4 658 204 40 0 0 chr2L 9689015 9689040 -13322504 + (CAGGG)n Simple_repeat Simple_repeat 3 27 0 4 658 21 0 0 0 chr2L 9689571 9689592 -13321952 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 183 80 0 0 chr2L 9691006 9691031 -13320513 + (ATG)n Simple_repeat Simple_repeat 1 25 0 4 658 24 0 0 0 chr2L 9691383 9691407 -13320137 + AT_rich Low_complexity Low_complexity 1 24 0 4 658 222 37 0 0 chr2L 9691900 9691927 -13319617 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 4 658 192 40 0 0 chr2L 9692852 9692877 -13318667 + (CAAAC)n Simple_repeat Simple_repeat 5 29 0 4 658 25 0 0 0 chr2L 9693912 9693937 -13317607 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 216 175 0 0 chr2L 9697650 9697690 -13313854 + CT-rich Low_complexity Low_complexity 3 42 0 4 658 206 235 14 29 chr2L 9697764 9697834 -13313710 + (CTG)n Simple_repeat Simple_repeat 2 70 0 4 658 221 196 18 18 chr2L 9698973 9699030 -13312514 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 659 35 0 0 0 chr2L 9699453 9699488 -13312056 + AT_rich Low_complexity Low_complexity 1 35 0 4 659 21 0 0 0 chr2L 9699546 9699567 -13311977 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 210 71 0 0 chr2L 9703113 9703141 -13308403 + (TCG)n Simple_repeat Simple_repeat 3 30 0 4 659 186 43 0 0 chr2L 9705438 9705461 -13306083 + (CAG)n Simple_repeat Simple_repeat 3 25 0 4 659 201 297 0 0 chr2L 9709354 9709428 -13302116 + (CAT)n Simple_repeat Simple_repeat 3 76 0 4 659 183 80 0 0 chr2L 9712119 9712144 -13299400 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 659 200 0 0 91 chr2L 9712544 9712577 -13298967 + (AACTG)n Simple_repeat Simple_repeat 5 34 0 4 659 279 0 0 0 chr2L 9713625 9713656 -13297888 + (CAGAT)n Simple_repeat Simple_repeat 1 31 0 4 659 219 36 0 0 chr2L 9714476 9714504 -13297040 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 659 25 0 0 0 chr2L 9714604 9714629 -13296915 + AT_rich Low_complexity Low_complexity 1 25 0 4 659 26 30 0 0 chr2L 9715360 9715393 -13296151 + AT_rich Low_complexity Low_complexity 1 33 0 4 659 200 130 22 0 chr2L 9715849 9715895 -13295649 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 659 258 105 0 0 chr2L 9716807 9716845 -13294699 + (TATCG)n Simple_repeat Simple_repeat 3 40 0 4 659 246 81 0 0 chr2L 9717249 9717286 -13294258 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 4 659 297 68 0 0 chr2L 9718616 9718660 -13292884 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 659 200 208 21 0 chr2L 9718922 9718970 -13292574 + (GTTTG)n Simple_repeat Simple_repeat 2 50 0 4 659 189 74 0 0 chr2L 9719829 9719856 -13291688 + (T)n Simple_repeat Simple_repeat 1 27 0 4 659 208 135 0 0 chr2L 9720019 9720056 -13291488 + (TAGA)n Simple_repeat Simple_repeat 2 38 0 4 659 195 42 0 0 chr2L 9720377 9720401 -13291143 + (TAGA)n Simple_repeat Simple_repeat 4 27 0 4 659 217 213 0 0 chr2L 9721159 9721206 -13290338 + (CTG)n Simple_repeat Simple_repeat 1 47 0 4 659 235 186 33 17 chr2L 9721778 9721838 -13289706 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 659 211 219 0 0 chr2L 9722183 9722224 -13289320 + (CAAT)n Simple_repeat Simple_repeat 4 44 0 4 659 209 111 0 62 chr2L 9723234 9723282 -13288262 + T-rich Low_complexity Low_complexity 2 46 0 4 659 205 200 0 0 chr2L 9723285 9723325 -13288219 + A-rich Low_complexity Low_complexity 1 40 0 4 659 249 119 0 0 chr2L 9723912 9723954 -13287590 + (CAATT)n Simple_repeat Simple_repeat 5 46 0 4 659 219 88 0 0 chr2L 9725056 9725090 -13286454 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 659 201 206 13 52 chr2L 9725132 9725209 -13286335 + T-rich Low_complexity Low_complexity 1 74 0 4 659 216 0 0 0 chr2L 9725701 9725725 -13285819 + (ATTCG)n Simple_repeat Simple_repeat 1 24 0 4 659 27 29 0 0 chr2L 9726768 9726802 -13284742 + AT_rich Low_complexity Low_complexity 1 34 0 4 659 210 180 0 0 chr2L 9727578 9727639 -13283905 + (TTG)n Simple_repeat Simple_repeat 2 62 0 4 659 180 77 0 0 chr2L 9728910 9728936 -13282608 + (CACCAT)n Simple_repeat Simple_repeat 6 31 0 4 659 198 0 0 0 chr2L 9729448 9729470 -13282074 + (A)n Simple_repeat Simple_repeat 1 22 0 4 659 22 0 0 0 chr2L 9731192 9731214 -13280330 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 239 186 17 0 chr2L 9731584 9731643 -13279901 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 659 318 53 35 17 chr2L 9732830 9732888 -13278656 + (ATTTG)n Simple_repeat Simple_repeat 1 59 0 4 659 222 105 0 0 chr2L 9734339 9734377 -13277167 + (ATG)n Simple_repeat Simple_repeat 1 38 0 4 659 25 75 0 0 chr2L 9734724 9734777 -13276767 + AT_rich Low_complexity Low_complexity 1 53 0 4 659 25 0 0 0 chr2L 9735890 9735915 -13275629 + AT_rich Low_complexity Low_complexity 1 25 0 4 659 25 0 0 0 chr2L 9738055 9738080 -13273464 + AT_rich Low_complexity Low_complexity 1 25 0 4 659 249 119 0 0 chr2L 9739863 9739905 -13271639 + (TTG)n Simple_repeat Simple_repeat 1 42 0 4 659 249 33 0 0 chr2L 9740370 9740400 -13271144 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 659 208 147 0 0 chr2L 9740571 9740605 -13270939 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 659 192 40 0 0 chr2L 9740696 9740721 -13270823 + (TATG)n Simple_repeat Simple_repeat 4 28 0 4 659 195 69 0 0 chr2L 9741530 9741559 -13269985 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 659 212 303 10 10 chr2L 9742777 9742877 -13268667 + (TTG)n Simple_repeat Simple_repeat 2 101 0 4 659 337 160 35 86 chr2L 9743045 9743161 -13268383 - ROO_I LTR Pao -7517 739 630 4 659 229 119 67 17 chr2L 9743215 9743275 -13268269 - ROO_I LTR Pao -7554 702 640 4 659 247 148 0 36 chr2L 9743305 9743361 -13268183 + (TTGG)n Simple_repeat Simple_repeat 3 56 0 4 659 320 64 21 0 chr2L 9743764 9743811 -13267733 + (CTG)n Simple_repeat Simple_repeat 2 49 0 4 659 23 33 0 0 chr2L 9744425 9744455 -13267089 + AT_rich Low_complexity Low_complexity 1 30 0 4 659 36 100 0 0 chr2L 9744536 9744656 -13266888 + AT_rich Low_complexity Low_complexity 1 120 0 4 659 356 72 0 18 chr2L 9745906 9745963 -13265581 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 659 180 0 0 0 chr2L 9746965 9746985 -13264559 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 659 214 158 0 0 chr2L 9747147 9747185 -13264359 + (CAACC)n Simple_repeat Simple_repeat 2 39 0 4 659 23 0 0 0 chr2L 9747819 9747842 -13263702 + AT_rich Low_complexity Low_complexity 1 23 0 4 659 28 0 0 0 chr2L 9748451 9748479 -13263065 + AT_rich Low_complexity Low_complexity 1 28 0 4 659 264 59 0 0 chr2L 9751181 9751215 -13260329 + (CTG)n Simple_repeat Simple_repeat 2 35 0 4 659 30 69 0 0 chr2L 9752107 9752165 -13259379 + AT_rich Low_complexity Low_complexity 1 58 0 4 659 201 39 0 0 chr2L 9752772 9752798 -13258746 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 659 23 33 0 0 chr2L 9753085 9753115 -13258429 + AT_rich Low_complexity Low_complexity 1 30 0 4 659 201 232 0 0 chr2L 9753523 9753592 -13257952 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 659 256 265 0 24 chr2L 9754703 9754788 -13256756 + (CA)n Simple_repeat Simple_repeat 2 84 0 4 659 21 71 0 0 chr2L 9755904 9755946 -13255598 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 277 316 0 0 chr2L 9756366 9756464 -13255080 + (TTG)n Simple_repeat Simple_repeat 1 98 0 4 659 25 31 0 0 chr2L 9757908 9757940 -13253604 + AT_rich Low_complexity Low_complexity 1 32 0 4 659 21 0 0 0 chr2L 9760084 9760105 -13251439 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 30 0 0 0 chr2L 9763355 9763385 -13248159 + AT_rich Low_complexity Low_complexity 1 30 0 4 659 25 0 0 0 chr2L 9764661 9764686 -13246858 + AT_rich Low_complexity Low_complexity 1 25 0 4 659 266 50 0 130 chr2L 9770822 9770868 -13240676 + PROTOP_B DNA P 506 545 -608 4 659 24 32 0 0 chr2L 9773496 9773527 -13238017 + AT_rich Low_complexity Low_complexity 1 31 0 4 659 278 61 0 0 chr2L 9778672 9778705 -13232839 + DNAREP1_DM LINE Penelope 20 52 -542 4 659 408 171 0 0 chr2L 9778754 9778830 -13232714 + DNAREP1_DM LINE Penelope 519 594 0 4 659 364 183 0 0 chr2L 9779159 9779230 -13232314 - DNAREP1_DM LINE Penelope 0 594 524 4 659 381 64 380 13 chr2L 9779277 9779356 -13232188 - DNAREP1_DM LINE Penelope -486 108 1 4 659 198 0 0 0 chr2L 9779667 9779689 -13231855 + (A)n Simple_repeat Simple_repeat 1 22 0 4 659 198 0 0 0 chr2L 9779863 9779885 -13231659 + (AGCTG)n Simple_repeat Simple_repeat 3 24 0 4 659 237 65 0 0 chr2L 9783013 9783044 -13228500 + (CAG)n Simple_repeat Simple_repeat 2 32 0 4 659 22 0 0 0 chr2L 9784624 9784646 -13226898 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 27 0 0 0 chr2L 9784720 9784747 -13226797 + AT_rich Low_complexity Low_complexity 1 27 0 4 659 27 49 0 0 chr2L 9793388 9793429 -13218115 + AT_rich Low_complexity Low_complexity 1 41 0 4 659 33 0 0 0 chr2L 9794579 9794612 -13216932 + AT_rich Low_complexity Low_complexity 1 33 0 4 659 288 154 0 0 chr2L 9795643 9795695 -13215849 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 659 205 127 36 18 chr2L 9796932 9796988 -13214556 + T-rich Low_complexity Low_complexity 4 60 0 4 659 214 125 20 20 chr2L 9797306 9797355 -13214189 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 659 192 77 0 0 chr2L 9800930 9800956 -13210588 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 4 659 210 128 0 0 chr2L 9801685 9801724 -13209820 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 659 216 97 0 0 chr2L 9801862 9801893 -13209651 + (GTTTG)n Simple_repeat Simple_repeat 3 33 0 4 659 225 196 0 0 chr2L 9802177 9802233 -13209311 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 659 262 129 32 0 chr2L 9803829 9803891 -13207653 + (TTGG)n Simple_repeat Simple_repeat 3 66 0 4 659 28 0 0 0 chr2L 9804101 9804129 -13207415 + AT_rich Low_complexity Low_complexity 1 28 0 4 659 25 0 0 0 chr2L 9804287 9804312 -13207232 + AT_rich Low_complexity Low_complexity 1 25 0 4 659 207 222 0 18 chr2L 9805381 9805436 -13206108 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 4 659 210 91 0 0 chr2L 9808236 9808269 -13203275 + (GA)n Simple_repeat Simple_repeat 1 33 0 4 659 202 152 0 33 chr2L 9812883 9812944 -13198600 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 659 21 0 0 0 chr2L 9813745 9813766 -13197778 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 183 100 0 0 chr2L 9813954 9813984 -13197560 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 659 201 167 0 0 chr2L 9814874 9814910 -13196634 + T-rich Low_complexity Low_complexity 1 36 0 4 659 219 36 0 0 chr2L 9815070 9815098 -13196446 + (T)n Simple_repeat Simple_repeat 1 28 0 4 659 216 158 0 0 chr2L 9816153 9816191 -13195353 + (CATATA)n Simple_repeat Simple_repeat 1 38 0 4 659 26 0 0 0 chr2L 9817579 9817605 -13193939 + AT_rich Low_complexity Low_complexity 1 26 0 4 659 23 0 0 0 chr2L 9818161 9818184 -13193360 + AT_rich Low_complexity Low_complexity 1 23 0 4 659 216 67 0 0 chr2L 9818406 9818436 -13193108 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 659 26 0 0 0 chr2L 9818695 9818721 -13192823 + AT_rich Low_complexity Low_complexity 1 26 0 4 659 183 42 0 0 chr2L 9819378 9819402 -13192142 + (A)n Simple_repeat Simple_repeat 1 24 0 4 659 247 204 0 0 chr2L 9820417 9820471 -13191073 + A-rich Low_complexity Low_complexity 1 54 0 4 659 252 0 0 0 chr2L 9821388 9821416 -13190128 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 659 279 114 0 0 chr2L 9822435 9822479 -13189065 + (CAT)n Simple_repeat Simple_repeat 1 44 0 4 659 267 114 0 0 chr2L 9823130 9823174 -13188370 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 659 237 118 14 42 chr2L 9823256 9823327 -13188217 + T-rich Low_complexity Low_complexity 3 71 0 4 659 189 107 0 0 chr2L 9823471 9823499 -13188045 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 659 318 156 0 0 chr2L 9824923 9824987 -13186557 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 659 239 54 0 26 chr2L 9825414 9825452 -13186092 + (CAATT)n Simple_repeat Simple_repeat 3 39 0 4 659 222 174 0 0 chr2L 9827657 9827703 -13183841 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 659 195 42 0 0 chr2L 9829940 9829964 -13181580 + (CAGC)n Simple_repeat Simple_repeat 2 25 0 4 660 204 182 0 0 chr2L 9833070 9833114 -13178430 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 660 29 0 0 0 chr2L 9833372 9833401 -13178143 + AT_rich Low_complexity Low_complexity 1 29 0 4 660 186 103 0 0 chr2L 9833709 9833738 -13177806 + (CAT)n Simple_repeat Simple_repeat 1 29 0 4 660 207 0 0 0 chr2L 9834696 9834719 -13176825 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 660 205 246 27 14 chr2L 9835416 9835490 -13176054 + (TATG)n Simple_repeat Simple_repeat 4 78 0 4 660 212 171 0 0 chr2L 9836081 9836122 -13175422 + (TTG)n Simple_repeat Simple_repeat 2 42 0 4 660 23 33 0 0 chr2L 9836943 9836973 -13174571 + GC_rich Low_complexity Low_complexity 1 30 0 4 660 25 51 0 0 chr2L 9837686 9837725 -13173819 + AT_rich Low_complexity Low_complexity 1 39 0 4 660 212 246 0 0 chr2L 9841335 9841396 -13170148 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 660 22 0 0 0 chr2L 9841486 9841508 -13170036 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 211 209 0 0 chr2L 9846566 9846609 -13164935 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 660 186 43 0 0 chr2L 9850429 9850452 -13161092 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 660 189 0 0 0 chr2L 9850603 9850624 -13160920 + (CCTG)n Simple_repeat Simple_repeat 1 21 0 4 660 239 224 0 0 chr2L 9854941 9854990 -13156554 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 660 30 83 0 0 chr2L 9855377 9855449 -13156095 + AT_rich Low_complexity Low_complexity 1 72 0 4 660 183 80 0 0 chr2L 9856928 9856953 -13154591 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 660 180 158 0 0 chr2L 9858657 9858695 -13152849 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 660 204 40 0 0 chr2L 9858934 9858959 -13152585 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 660 27 62 0 0 chr2L 9859165 9859213 -13152331 + AT_rich Low_complexity Low_complexity 1 48 0 4 660 24 32 0 0 chr2L 9859284 9859315 -13152229 + AT_rich Low_complexity Low_complexity 1 31 0 4 660 21 0 0 0 chr2L 9860782 9860803 -13150741 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 205 175 0 0 chr2L 9861268 9861308 -13150236 + GA-rich Low_complexity Low_complexity 2 41 0 4 660 293 0 0 26 chr2L 9862418 9862456 -13149088 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 660 228 167 0 0 chr2L 9863661 9863709 -13147835 + CT-rich Low_complexity Low_complexity 2 49 0 4 660 225 204 0 0 chr2L 9864837 9864881 -13146663 + T-rich Low_complexity Low_complexity 1 44 0 4 660 201 146 0 0 chr2L 9870350 9870398 -13141146 + (TTTTTG)n Simple_repeat Simple_repeat 5 52 0 4 660 21 82 0 0 chr2L 9871458 9871507 -13140037 + AT_rich Low_complexity Low_complexity 1 49 0 4 660 22 35 0 0 chr2L 9872902 9872931 -13138613 + AT_rich Low_complexity Low_complexity 1 29 0 4 660 234 0 0 0 chr2L 9873221 9873247 -13138297 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 4 660 231 239 28 14 chr2L 9873270 9873342 -13138202 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 660 249 297 8 30 chr2L 9874162 9874294 -13137250 + (ATG)n Simple_repeat Simple_repeat 2 130 0 4 660 180 0 0 0 chr2L 9874638 9874658 -13136886 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 4 660 195 69 0 0 chr2L 9874728 9874757 -13136787 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 660 22 0 0 0 chr2L 9875789 9875811 -13135733 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 282 165 31 52 chr2L 9877125 9877221 -13134323 - ROO_I LTR Pao -7523 733 640 4 660 201 243 28 14 chr2L 9877859 9877930 -13133614 + T-rich Low_complexity Low_complexity 4 75 0 4 660 215 157 20 0 chr2L 9878043 9878094 -13133450 + GA-rich Low_complexity Low_complexity 2 53 0 4 660 207 286 0 0 chr2L 9878843 9878906 -13132638 + A-rich Low_complexity Low_complexity 1 63 0 4 660 230 95 0 73 chr2L 9879518 9879586 -13131958 + (TTG)n Simple_repeat Simple_repeat 1 63 0 4 660 183 42 0 0 chr2L 9880827 9880851 -13130693 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 660 201 290 9 45 chr2L 9882325 9882437 -13129107 + GA-rich Low_complexity Low_complexity 5 112 0 4 660 198 143 0 0 chr2L 9882739 9882774 -13128770 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 660 35 41 0 0 chr2L 9885805 9885854 -13125690 + AT_rich Low_complexity Low_complexity 1 49 0 4 660 26 0 0 0 chr2L 9892471 9892497 -13119047 + AT_rich Low_complexity Low_complexity 1 26 0 4 660 24 32 0 0 chr2L 9893876 9893907 -13117637 + AT_rich Low_complexity Low_complexity 1 31 0 4 660 28 0 0 0 chr2L 9894021 9894049 -13117495 + AT_rich Low_complexity Low_complexity 1 28 0 4 660 22 35 0 0 chr2L 9895381 9895410 -13116134 + AT_rich Low_complexity Low_complexity 1 29 0 4 660 57 16 0 0 chr2L 9897840 9897904 -13113640 + AT_rich Low_complexity Low_complexity 1 64 0 4 660 233 238 50 0 chr2L 9908476 9908556 -13102988 + (TATG)n Simple_repeat Simple_repeat 3 86 0 4 660 28 48 0 0 chr2L 9910227 9910269 -13101275 + AT_rich Low_complexity Low_complexity 1 42 0 4 660 21 36 0 0 chr2L 9912675 9912703 -13098841 + AT_rich Low_complexity Low_complexity 1 28 0 4 660 24 0 0 0 chr2L 9918409 9918433 -13093111 + AT_rich Low_complexity Low_complexity 1 24 0 4 660 310 127 0 27 chr2L 9929252 9929325 -13082219 + CT-rich Low_complexity Low_complexity 2 72 0 4 660 21 0 0 0 chr2L 9929771 9929792 -13081752 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 3875 174 12 20 chr2L 9931234 9932079 -13079465 - SAR_DM Satellite Satellite -444 1028 191 4 660 189 107 0 0 chr2L 9934874 9934902 -13076642 + (T)n Simple_repeat Simple_repeat 1 28 0 4 660 22 0 0 0 chr2L 9935103 9935125 -13076419 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 23 0 0 0 chr2L 9944684 9944707 -13066837 + AT_rich Low_complexity Low_complexity 1 23 0 4 660 225 204 0 0 chr2L 9945420 9945464 -13066080 + (ATCTG)n Simple_repeat Simple_repeat 3 46 0 4 660 237 263 20 31 chr2L 9950766 9950864 -13060680 + (GCTG)n Simple_repeat Simple_repeat 4 100 0 4 660 204 125 0 0 chr2L 9950920 9950952 -13060592 + (TTG)n Simple_repeat Simple_repeat 3 34 0 4 660 26 30 0 0 chr2L 9951480 9951513 -13060031 + AT_rich Low_complexity Low_complexity 1 33 0 4 660 24 0 0 0 chr2L 9954348 9954372 -13057172 + AT_rich Low_complexity Low_complexity 1 24 0 4 660 21 57 0 0 chr2L 9957090 9957125 -13054419 + AT_rich Low_complexity Low_complexity 1 35 0 4 660 21 36 0 0 chr2L 9957147 9957175 -13054369 + AT_rich Low_complexity Low_complexity 1 28 0 4 661 29 60 0 0 chr2L 9963806 9963856 -13047688 + AT_rich Low_complexity Low_complexity 1 50 0 4 661 21 36 0 0 chr2L 9964158 9964186 -13047358 + AT_rich Low_complexity Low_complexity 1 28 0 4 661 211 208 0 0 chr2L 9969452 9969505 -13042039 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 4 661 25 31 0 0 chr2L 9970215 9970247 -13041297 + AT_rich Low_complexity Low_complexity 1 32 0 4 661 244 115 115 0 chr2L 9973425 9973477 -13038067 + T-rich Low_complexity Low_complexity 2 59 0 4 661 2474 8 0 0 chr2L 9973780 9974046 -13037498 + DMLTR5 LTR Gypsy 1 266 0 4 661 6978 2 0 7 chr2L 9974045 9974845 -13036699 + HMSBEAGLE_I LTR Gypsy 1 796 -5733 4 661 974 29 52 12 chr2L 9974845 9975017 -13036527 + (TTA)n Simple_repeat Simple_repeat 1 179 0 4 661 51722 0 0 0 chr2L 9975017 9980576 -13030968 + HMSBEAGLE_I LTR Gypsy 969 6529 0 4 661 2474 8 0 0 chr2L 9980576 9980842 -13030702 + DMLTR5 LTR Gypsy 1 266 0 4 661 270 116 0 0 chr2L 9982858 9982901 -13028643 + (ATG)n Simple_repeat Simple_repeat 1 43 0 4 661 228 111 0 0 chr2L 9983119 9983155 -13028389 + (CAT)n Simple_repeat Simple_repeat 1 36 0 4 661 318 138 0 0 chr2L 9983991 9984049 -13027495 + (CAT)n Simple_repeat Simple_repeat 1 58 0 4 661 1828 187 12 9 chr2L 9985205 9985626 -13025918 - SAR_DM Satellite Satellite -535 937 516 4 661 237 132 0 0 chr2L 9993881 9993919 -13017625 + (CAG)n Simple_repeat Simple_repeat 1 38 0 4 661 240 155 11 106 chr2L 9994028 9994122 -13017422 + ROO_I LTR Pao 641 725 -7531 4 661 393 117 0 0 chr2L 9994541 9994601 -13016943 + (CAG)n Simple_repeat Simple_repeat 1 60 0 4 661 425 167 12 23 chr2L 9995569 9995655 -13015889 + BARI1 DNA Tc1 11 95 -1655 4 661 23 33 0 0 chr2L 10003582 10003612 -13007932 + AT_rich Low_complexity Low_complexity 1 30 0 4 661 208 204 23 0 chr2L 10004744 10004788 -13006756 + (TTG)n Simple_repeat Simple_repeat 1 45 0 4 661 21 57 0 0 chr2L 10006803 10006838 -13004706 + AT_rich Low_complexity Low_complexity 1 35 0 4 661 41 36 0 0 chr2L 10008777 10008832 -13002712 + AT_rich Low_complexity Low_complexity 1 55 0 4 661 203 147 0 0 chr2L 10010096 10010130 -13001414 + (TTG)n Simple_repeat Simple_repeat 1 34 0 4 661 201 129 0 0 chr2L 10010507 10010538 -13001006 + (GGA)n Simple_repeat Simple_repeat 3 33 0 4 661 305 306 0 39 chr2L 10011045 10011198 -13000346 + GA-rich Low_complexity Low_complexity 2 148 0 4 661 21 36 0 0 chr2L 10012085 10012113 -12999431 + AT_rich Low_complexity Low_complexity 1 28 0 4 661 26 0 0 0 chr2L 10012507 10012533 -12999011 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 204 163 0 0 chr2L 10016744 10016787 -12994757 + (TGG)n Simple_repeat Simple_repeat 2 44 0 4 661 216 0 0 0 chr2L 10021583 10021607 -12989937 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 661 26 82 0 0 chr2L 10025055 10025116 -12986428 + AT_rich Low_complexity Low_complexity 1 61 0 4 661 198 0 0 0 chr2L 10029513 10029535 -12982009 + (CTG)n Simple_repeat Simple_repeat 1 22 0 4 661 204 213 0 0 chr2L 10031702 10031749 -12979795 + GA-rich Low_complexity Low_complexity 3 49 0 4 661 24 0 0 0 chr2L 10032848 10032872 -12978672 + AT_rich Low_complexity Low_complexity 1 24 0 4 661 198 143 0 0 chr2L 10033163 10033198 -12978346 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 4 661 226 132 0 26 chr2L 10033480 10033519 -12978025 - DNAREP1_DM LINE Penelope -7 587 550 4 661 270 174 0 0 chr2L 10033627 10033673 -12977871 - DNAREP1_DM LINE Penelope -548 46 1 4 661 211 309 0 0 chr2L 10034507 10034562 -12976982 + (CCCCAA)n Simple_repeat Simple_repeat 6 60 0 4 661 27 29 0 0 chr2L 10035218 10035252 -12976292 + AT_rich Low_complexity Low_complexity 1 34 0 4 661 189 0 0 0 chr2L 10035489 10035510 -12976034 + (CAG)n Simple_repeat Simple_repeat 3 23 0 4 661 185 108 0 26 chr2L 10035718 10035756 -12975788 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 661 200 34 0 33 chr2L 10037347 10037377 -12974167 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 661 189 0 0 0 chr2L 10037982 10038003 -12973541 + (CATA)n Simple_repeat Simple_repeat 4 24 0 4 661 237 33 0 0 chr2L 10038844 10038874 -12972670 + (GGA)n Simple_repeat Simple_repeat 3 32 0 4 661 180 0 0 0 chr2L 10040323 10040343 -12971201 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 661 30 0 0 0 chr2L 10041534 10041564 -12969980 + AT_rich Low_complexity Low_complexity 1 30 0 4 661 220 195 0 0 chr2L 10042159 10042200 -12969344 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 4 661 26 0 0 0 chr2L 10042986 10043012 -12968532 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 23 54 0 0 chr2L 10043114 10043151 -12968393 + AT_rich Low_complexity Low_complexity 1 37 0 4 661 32 26 0 0 chr2L 10044490 10044529 -12967015 + AT_rich Low_complexity Low_complexity 1 39 0 4 661 211 182 12 49 chr2L 10048324 10048405 -12963139 + T-rich Low_complexity Low_complexity 3 80 0 4 661 26 30 0 0 chr2L 10050918 10050951 -12960593 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 243 180 0 74 chr2L 10050977 10051031 -12960513 - DNAREP1_DM LINE Penelope -544 50 1 4 661 206 274 0 19 chr2L 10051572 10051624 -12959920 + (TTCGGG)n Simple_repeat Simple_repeat 5 55 0 4 661 21 0 0 0 chr2L 10052470 10052491 -12959053 + AT_rich Low_complexity Low_complexity 1 21 0 4 661 225 132 0 0 chr2L 10052830 10052868 -12958676 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 661 25 0 0 0 chr2L 10053587 10053612 -12957932 + AT_rich Low_complexity Low_complexity 1 25 0 4 661 240 122 0 0 chr2L 10054101 10054142 -12957402 + (T)n Simple_repeat Simple_repeat 1 41 0 4 661 228 35 0 0 chr2L 10055674 10055703 -12955841 + (CAG)n Simple_repeat Simple_repeat 1 29 0 4 661 29 28 0 0 chr2L 10056484 10056520 -12955024 + AT_rich Low_complexity Low_complexity 1 36 0 4 661 27 73 0 0 chr2L 10056742 10056797 -12954747 + AT_rich Low_complexity Low_complexity 1 55 0 4 661 22 0 0 0 chr2L 10058823 10058845 -12952699 + AT_rich Low_complexity Low_complexity 1 22 0 4 661 234 0 0 0 chr2L 10059979 10060005 -12951539 + (CAA)n Simple_repeat Simple_repeat 3 28 0 4 661 183 80 0 0 chr2L 10065405 10065430 -12946114 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 661 192 200 0 0 chr2L 10068091 10068136 -12943408 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 4 661 216 167 0 0 chr2L 10069365 10069401 -12942143 + (TGG)n Simple_repeat Simple_repeat 1 36 0 4 661 229 296 0 0 chr2L 10069461 10069515 -12942029 + C-rich Low_complexity Low_complexity 5 58 0 4 661 23 0 0 0 chr2L 10069747 10069770 -12941774 + AT_rich Low_complexity Low_complexity 1 23 0 4 661 22 56 0 0 chr2L 10070460 10070496 -12941048 + AT_rich Low_complexity Low_complexity 1 36 0 4 661 22 0 0 0 chr2L 10073140 10073162 -12938382 + AT_rich Low_complexity Low_complexity 1 22 0 4 661 21 0 0 0 chr2L 10073607 10073628 -12937916 + AT_rich Low_complexity Low_complexity 1 21 0 4 661 23 0 0 0 chr2L 10074542 10074565 -12936979 + AT_rich Low_complexity Low_complexity 1 23 0 4 661 201 171 0 0 chr2L 10080664 10080699 -12930845 + A-rich Low_complexity Low_complexity 1 35 0 4 661 25 0 0 0 chr2L 10089787 10089812 -12921732 + AT_rich Low_complexity Low_complexity 1 25 0 4 662 249 146 0 0 chr2L 10095359 10095407 -12916137 + (CCA)n Simple_repeat Simple_repeat 1 48 0 4 662 231 36 0 0 chr2L 10102842 10102870 -12908674 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 662 237 83 0 0 chr2L 10103063 10103099 -12908445 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 4 662 201 39 0 0 chr2L 10103275 10103301 -12908243 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 662 22 0 0 0 chr2L 10108524 10108546 -12902998 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 267 31 0 0 chr2L 10109285 10109317 -12902227 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 662 21 0 0 0 chr2L 10114652 10114673 -12896871 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 24 53 0 0 chr2L 10115045 10115083 -12896461 + AT_rich Low_complexity Low_complexity 1 38 0 4 662 209 200 0 0 chr2L 10115687 10115722 -12895822 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 4 662 21 0 0 0 chr2L 10115829 10115850 -12895694 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 186 103 0 0 chr2L 10116635 10116664 -12894880 + (CATAC)n Simple_repeat Simple_repeat 2 30 0 4 662 234 0 0 0 chr2L 10117836 10117862 -12893682 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 662 43 56 0 0 chr2L 10118279 10118350 -12893194 + AT_rich Low_complexity Low_complexity 1 71 0 4 662 739 134 8 16 chr2L 10118444 10118565 -12892979 - HOBO DNA hAT -2892 124 5 4 662 197 149 43 0 chr2L 10119440 10119487 -12892057 + (CATA)n Simple_repeat Simple_repeat 1 49 0 4 662 220 241 38 12 chr2L 10121300 10121380 -12890164 + A-rich Low_complexity Low_complexity 4 85 0 4 662 186 43 0 0 chr2L 10121505 10121528 -12890016 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 662 28 79 0 0 chr2L 10122163 10122226 -12889318 + AT_rich Low_complexity Low_complexity 1 63 0 4 662 246 62 0 0 chr2L 10124104 10124136 -12887408 + (CCA)n Simple_repeat Simple_repeat 3 34 0 4 662 447 167 0 0 chr2L 10124324 10124414 -12887130 + (TGGA)n Simple_repeat Simple_repeat 2 91 0 4 662 22 0 0 0 chr2L 10125639 10125661 -12885883 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 25 75 0 0 chr2L 10125676 10125729 -12885815 + AT_rich Low_complexity Low_complexity 1 53 0 4 662 25 0 0 0 chr2L 10127395 10127420 -12884124 + AT_rich Low_complexity Low_complexity 1 25 0 4 662 232 188 0 20 chr2L 10133483 10133532 -12878012 + A-rich Low_complexity Low_complexity 2 49 0 4 662 200 239 22 0 chr2L 10135768 10135814 -12875730 + (TATG)n Simple_repeat Simple_repeat 3 49 0 4 662 211 255 0 0 chr2L 10135991 10136038 -12875506 + (CCCGAA)n Simple_repeat Simple_repeat 2 48 0 4 662 47824 3 0 0 chr2L 10138218 10143401 -12868143 - DMRT1B LINE R1 0 5183 1 4 662 210 37 0 0 chr2L 10143407 10143434 -12868110 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 662 25 0 0 0 chr2L 10144153 10144178 -12867366 + AT_rich Low_complexity Low_complexity 1 25 0 4 662 26 30 0 0 chr2L 10144245 10144278 -12867266 + AT_rich Low_complexity Low_complexity 1 33 0 4 662 180 77 0 0 chr2L 10145439 10145465 -12866079 + (T)n Simple_repeat Simple_repeat 1 26 0 4 662 25 0 0 0 chr2L 10147374 10147399 -12864145 + AT_rich Low_complexity Low_complexity 1 25 0 4 662 207 146 0 0 chr2L 10148324 10148365 -12863179 + (GGA)n Simple_repeat Simple_repeat 3 43 0 4 662 27 29 0 0 chr2L 10149801 10149835 -12861709 + AT_rich Low_complexity Low_complexity 1 34 0 4 662 207 0 0 0 chr2L 10150589 10150612 -12860932 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 662 267 114 0 0 chr2L 10151581 10151625 -12859919 + (CAG)n Simple_repeat Simple_repeat 2 45 0 4 662 35 0 0 0 chr2L 10151993 10152028 -12859516 + AT_rich Low_complexity Low_complexity 1 35 0 4 662 195 42 0 0 chr2L 10152892 10152916 -12858628 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 4 662 3730 0 0 5 chr2L 10156376 10156777 -12854767 - BLOOD_LTR LTR Gypsy 0 399 1 4 662 60250 0 0 0 chr2L 10156777 10163388 -12848156 - BLOOD_I LTR Gypsy 0 6613 1 4 662 3730 0 0 5 chr2L 10163388 10163789 -12847755 - BLOOD_LTR LTR Gypsy 0 399 1 4 662 215 103 26 0 chr2L 10166491 10166530 -12845014 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 662 21 0 0 0 chr2L 10168511 10168532 -12843012 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 27 29 0 0 chr2L 10168596 10168630 -12842914 + AT_rich Low_complexity Low_complexity 1 34 0 4 662 25 0 0 0 chr2L 10169687 10169712 -12841832 + AT_rich Low_complexity Low_complexity 1 25 0 4 662 24 0 0 0 chr2L 10170285 10170309 -12841235 + AT_rich Low_complexity Low_complexity 1 24 0 4 662 21 36 0 0 chr2L 10170336 10170364 -12841180 + AT_rich Low_complexity Low_complexity 1 28 0 4 662 216 158 0 0 chr2L 10171729 10171767 -12839777 + (TATG)n Simple_repeat Simple_repeat 3 40 0 4 662 21 36 0 0 chr2L 10174053 10174081 -12837463 + AT_rich Low_complexity Low_complexity 1 28 0 4 662 31 0 0 0 chr2L 10176483 10176514 -12835030 + AT_rich Low_complexity Low_complexity 1 31 0 4 662 22 35 0 0 chr2L 10178260 10178289 -12833255 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 425 110 137 0 chr2L 10181563 10181636 -12829908 - DNAREP1_DM LINE Penelope -116 478 396 4 662 24 32 0 0 chr2L 10183993 10184024 -12827520 + AT_rich Low_complexity Low_complexity 1 31 0 4 662 24 32 0 0 chr2L 10186258 10186289 -12825255 + AT_rich Low_complexity Low_complexity 1 31 0 4 662 37 39 0 0 chr2L 10188280 10188331 -12823213 + AT_rich Low_complexity Low_complexity 1 51 0 4 662 33 43 0 0 chr2L 10189770 10189817 -12821727 + AT_rich Low_complexity Low_complexity 1 47 0 4 662 192 216 0 0 chr2L 10191963 10192014 -12819530 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 4 662 23 0 0 0 chr2L 10196647 10196670 -12814874 + AT_rich Low_complexity Low_complexity 1 23 0 4 662 201 147 0 0 chr2L 10198869 10198903 -12812641 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 662 21 0 0 0 chr2L 10202444 10202465 -12809079 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 24 53 0 0 chr2L 10204395 10204433 -12807111 + AT_rich Low_complexity Low_complexity 1 38 0 4 662 27 29 0 0 chr2L 10209572 10209606 -12801938 + AT_rich Low_complexity Low_complexity 1 34 0 4 662 193 53 0 73 chr2L 10210178 10210219 -12801325 + (TTATA)n Simple_repeat Simple_repeat 1 38 0 4 662 23 54 0 0 chr2L 10211082 10211119 -12800425 + AT_rich Low_complexity Low_complexity 1 37 0 4 662 180 0 0 0 chr2L 10217222 10217242 -12794302 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 4 662 25 0 0 0 chr2L 10219672 10219697 -12791847 + AT_rich Low_complexity Low_complexity 1 25 0 4 662 21 0 0 0 chr2L 10220397 10220418 -12791126 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 30 77 0 0 chr2L 10222545 10222610 -12788934 + AT_rich Low_complexity Low_complexity 1 65 0 4 663 232 269 15 0 chr2L 10226315 10226382 -12785162 + (CATA)n Simple_repeat Simple_repeat 3 70 0 4 663 23 0 0 0 chr2L 10226940 10226963 -12784581 + AT_rich Low_complexity Low_complexity 1 23 0 4 663 21 57 0 0 chr2L 10227752 10227787 -12783757 + AT_rich Low_complexity Low_complexity 1 35 0 4 663 297 214 0 143 chr2L 10230350 10230448 -12781096 - DNAREP1_DM LINE Penelope -114 480 397 4 663 206 154 0 25 chr2L 10231069 10231109 -12780435 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 663 24 32 0 0 chr2L 10238775 10238806 -12772738 + AT_rich Low_complexity Low_complexity 1 31 0 4 663 24 0 0 0 chr2L 10239018 10239042 -12772502 + AT_rich Low_complexity Low_complexity 1 24 0 4 663 22 0 0 0 chr2L 10239131 10239153 -12772391 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 31 0 0 0 chr2L 10239590 10239621 -12771923 + AT_rich Low_complexity Low_complexity 1 31 0 4 663 21 71 0 0 chr2L 10240265 10240307 -12771237 + AT_rich Low_complexity Low_complexity 1 42 0 4 663 31 26 0 0 chr2L 10240359 10240397 -12771147 + AT_rich Low_complexity Low_complexity 1 38 0 4 663 29 0 0 0 chr2L 10242508 10242537 -12769007 + AT_rich Low_complexity Low_complexity 1 29 0 4 663 24 0 0 0 chr2L 10244563 10244587 -12766957 + AT_rich Low_complexity Low_complexity 1 24 0 4 663 241 318 0 0 chr2L 10246609 10246672 -12764872 + (TATG)n Simple_repeat Simple_repeat 2 64 0 4 663 198 118 0 0 chr2L 10246693 10246727 -12764817 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 663 22 0 0 0 chr2L 10253108 10253130 -12758414 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 336 189 0 0 chr2L 10260142 10260216 -12751328 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 663 29 47 0 0 chr2L 10261581 10261624 -12749920 + AT_rich Low_complexity Low_complexity 1 43 0 4 663 30 0 0 0 chr2L 10263751 10263781 -12747763 + AT_rich Low_complexity Low_complexity 1 30 0 4 663 50 65 0 0 chr2L 10263872 10263964 -12747580 + AT_rich Low_complexity Low_complexity 1 92 0 4 663 22 0 0 0 chr2L 10264265 10264287 -12747257 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 23 33 0 0 chr2L 10264517 10264547 -12746997 + AT_rich Low_complexity Low_complexity 1 30 0 4 663 28 29 0 0 chr2L 10269560 10269595 -12741949 + AT_rich Low_complexity Low_complexity 1 35 0 4 663 29 28 0 0 chr2L 10272367 10272403 -12739141 + AT_rich Low_complexity Low_complexity 1 36 0 4 663 25 51 0 0 chr2L 10272420 10272459 -12739085 + AT_rich Low_complexity Low_complexity 1 39 0 4 663 200 128 0 25 chr2L 10276635 10276675 -12734869 + T-rich Low_complexity Low_complexity 5 43 0 4 663 212 236 0 27 chr2L 10276701 10276775 -12734769 + (CATA)n Simple_repeat Simple_repeat 3 74 0 4 663 31 0 0 0 chr2L 10278756 10278787 -12732757 + AT_rich Low_complexity Low_complexity 1 31 0 4 663 21 0 0 0 chr2L 10280329 10280350 -12731194 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 21 0 0 0 chr2L 10287948 10287969 -12723575 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 21 0 0 0 chr2L 10290876 10290897 -12720647 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 22 56 0 0 chr2L 10291321 10291357 -12720187 + AT_rich Low_complexity Low_complexity 1 36 0 4 663 29 47 0 0 chr2L 10294668 10294711 -12716833 + AT_rich Low_complexity Low_complexity 1 43 0 4 663 198 0 0 0 chr2L 10296863 10296885 -12714659 + (A)n Simple_repeat Simple_repeat 1 22 0 4 663 28 61 0 0 chr2L 10297946 10297995 -12713549 + AT_rich Low_complexity Low_complexity 1 49 0 4 663 362 264 0 11 chr2L 10298603 10298695 -12712849 + DNAREP1_DM LINE Penelope 396 486 -108 4 663 27 29 0 0 chr2L 10304040 10304074 -12707470 + AT_rich Low_complexity Low_complexity 1 34 0 4 663 27 29 0 0 chr2L 10306685 10306719 -12704825 + AT_rich Low_complexity Low_complexity 1 34 0 4 663 21 0 0 0 chr2L 10306795 10306816 -12704728 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 22 35 0 0 chr2L 10320139 10320168 -12691376 + AT_rich Low_complexity Low_complexity 1 29 0 4 663 25 83 0 0 chr2L 10328053 10328113 -12683431 + AT_rich Low_complexity Low_complexity 1 60 0 4 663 27 81 0 0 chr2L 10328163 10328225 -12683319 + AT_rich Low_complexity Low_complexity 1 62 0 4 663 25 31 0 0 chr2L 10329136 10329168 -12682376 + AT_rich Low_complexity Low_complexity 1 32 0 4 663 23 33 0 0 chr2L 10329272 10329302 -12682242 + AT_rich Low_complexity Low_complexity 1 30 0 4 663 24 0 0 0 chr2L 10329411 10329435 -12682109 + AT_rich Low_complexity Low_complexity 1 24 0 4 663 37 69 0 0 chr2L 10331190 10331262 -12680282 + AT_rich Low_complexity Low_complexity 1 72 0 4 663 204 244 0 0 chr2L 10335176 10335217 -12676327 + (TATG)n Simple_repeat Simple_repeat 4 44 0 4 663 24 49 0 47 chr2L 10335442 10335506 -12676038 + AT_rich Low_complexity Low_complexity 1 61 0 4 663 47 53 0 0 chr2L 10338712 10338787 -12672757 + AT_rich Low_complexity Low_complexity 1 75 0 4 663 34 42 0 0 chr2L 10340245 10340293 -12671251 + AT_rich Low_complexity Low_complexity 1 48 0 4 663 22 0 0 0 chr2L 10341186 10341208 -12670336 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 21 89 0 0 chr2L 10345400 10345456 -12666088 + AT_rich Low_complexity Low_complexity 1 56 0 4 663 21 36 0 0 chr2L 10348505 10348533 -12663011 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 29 28 0 0 chr2L 10349329 10349365 -12662179 + AT_rich Low_complexity Low_complexity 1 36 0 4 663 235 256 31 82 chr2L 10351228 10351326 -12660218 - PENELOPE LINE Penelope -150 4011 3919 4 663 22 35 0 0 chr2L 10352225 10352254 -12659290 + AT_rich Low_complexity Low_complexity 1 29 0 4 663 266 167 42 32 chr2L 10352683 10352754 -12658790 - DNAREP1_DM LINE Penelope -110 484 431 4 664 22 0 0 0 chr2L 10355877 10355899 -12655645 + AT_rich Low_complexity Low_complexity 1 22 0 4 664 23 78 0 0 chr2L 10356518 10356569 -12654975 + AT_rich Low_complexity Low_complexity 1 51 0 4 664 27 29 0 0 chr2L 10362868 10362902 -12648642 + AT_rich Low_complexity Low_complexity 1 34 0 4 664 24 0 0 0 chr2L 10366383 10366407 -12645137 + AT_rich Low_complexity Low_complexity 1 24 0 4 664 24 0 0 0 chr2L 10366571 10366595 -12644949 + AT_rich Low_complexity Low_complexity 1 24 0 4 664 21 57 0 0 chr2L 10368476 10368511 -12643033 + AT_rich Low_complexity Low_complexity 1 35 0 4 664 21 89 0 0 chr2L 10373151 10373207 -12638337 + AT_rich Low_complexity Low_complexity 1 56 0 4 664 24 67 0 0 chr2L 10375854 10375899 -12635645 + AT_rich Low_complexity Low_complexity 1 45 0 4 664 31 44 0 0 chr2L 10375959 10376004 -12635540 + AT_rich Low_complexity Low_complexity 1 45 0 4 664 327 113 0 0 chr2L 10376589 10376642 -12634902 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 664 213 205 0 0 chr2L 10376929 10376968 -12634576 + (TATG)n Simple_repeat Simple_repeat 2 40 0 4 664 23 0 0 0 chr2L 10377517 10377540 -12634004 + AT_rich Low_complexity Low_complexity 1 23 0 4 664 201 121 0 0 chr2L 10388836 10388869 -12622675 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 664 25 51 0 0 chr2L 10389469 10389508 -12622036 + AT_rich Low_complexity Low_complexity 1 39 0 4 664 21 36 0 0 chr2L 10389871 10389899 -12621645 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 190 98 73 0 chr2L 10392447 10392488 -12619056 + A-rich Low_complexity Low_complexity 3 46 0 4 664 28 0 0 0 chr2L 10395667 10395695 -12615849 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 217 206 32 0 chr2L 10396474 10396537 -12615007 + (TAAA)n Simple_repeat Simple_repeat 2 66 0 4 664 212 59 29 0 chr2L 10397979 10398013 -12613531 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 664 29 28 0 0 chr2L 10398998 10399034 -12612510 + AT_rich Low_complexity Low_complexity 1 36 0 4 664 264 100 0 0 chr2L 10401674 10401714 -12609830 + (CAG)n Simple_repeat Simple_repeat 3 42 0 4 664 976 118 168 6 chr2L 10404145 10404324 -12607220 + DNAREP1_DM LINE Penelope 1 208 -386 4 664 26 50 0 0 chr2L 10407785 10407825 -12603719 + AT_rich Low_complexity Low_complexity 1 40 0 4 664 31 26 0 0 chr2L 10413568 10413606 -12597938 + AT_rich Low_complexity Low_complexity 1 38 0 4 664 32 57 0 0 chr2L 10418646 10418699 -12592845 + AT_rich Low_complexity Low_complexity 1 53 0 4 664 22 0 0 0 chr2L 10419014 10419036 -12592508 + AT_rich Low_complexity Low_complexity 1 22 0 4 664 201 39 0 0 chr2L 10420684 10420710 -12590834 + (T)n Simple_repeat Simple_repeat 1 26 0 4 664 28 48 0 0 chr2L 10422907 10422949 -12588595 + AT_rich Low_complexity Low_complexity 1 42 0 4 664 22 0 0 0 chr2L 10426225 10426247 -12585297 + AT_rich Low_complexity Low_complexity 1 22 0 4 664 24 0 0 0 chr2L 10426718 10426742 -12584802 + AT_rich Low_complexity Low_complexity 1 24 0 4 664 21 0 0 0 chr2L 10428106 10428127 -12583417 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 23 68 0 0 chr2L 10431086 10431130 -12580414 + AT_rich Low_complexity Low_complexity 1 44 0 4 664 36 23 0 0 chr2L 10435902 10435945 -12575599 + AT_rich Low_complexity Low_complexity 1 43 0 4 664 290 190 69 0 chr2L 10437411 10437469 -12574075 - DNAREP1_DM LINE Penelope -532 62 1 4 664 21 36 0 0 chr2L 10442192 10442220 -12569324 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 28 0 0 0 chr2L 10442375 10442403 -12569141 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 216 0 0 0 chr2L 10442982 10443006 -12568538 + (TTTAA)n Simple_repeat Simple_repeat 5 28 0 4 664 21 36 0 0 chr2L 10445122 10445150 -12566394 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 225 0 0 0 chr2L 10446077 10446102 -12565442 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 664 28 29 0 0 chr2L 10446746 10446781 -12564763 + AT_rich Low_complexity Low_complexity 1 35 0 4 664 24 53 0 0 chr2L 10449531 10449569 -12561975 + AT_rich Low_complexity Low_complexity 1 38 0 4 664 27 0 0 0 chr2L 10450250 10450277 -12561267 + AT_rich Low_complexity Low_complexity 1 27 0 4 664 24 53 0 0 chr2L 10450434 10450472 -12561072 + AT_rich Low_complexity Low_complexity 1 38 0 4 664 23 54 0 0 chr2L 10452625 10452662 -12558882 + AT_rich Low_complexity Low_complexity 1 37 0 4 664 198 0 0 0 chr2L 10456852 10456874 -12554670 + (TA)n Simple_repeat Simple_repeat 1 22 0 4 664 39 0 0 0 chr2L 10460821 10460860 -12550684 + AT_rich Low_complexity Low_complexity 1 39 0 4 664 28 0 0 0 chr2L 10463616 10463644 -12547900 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 339 110 0 8 chr2L 10468575 10468654 -12542890 + DMRP1 Unknown Unknown 46 154 -192 4 664 190 125 20 20 chr2L 10468719 10468768 -12542776 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 664 198 0 0 0 chr2L 10472615 10472637 -12538907 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 664 189 107 0 0 chr2L 10473097 10473125 -12538419 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 664 26 0 0 0 chr2L 10473483 10473509 -12538035 + AT_rich Low_complexity Low_complexity 1 26 0 4 664 28 0 0 0 chr2L 10474108 10474136 -12537408 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 24 53 0 0 chr2L 10474529 10474567 -12536977 + AT_rich Low_complexity Low_complexity 1 38 0 4 664 26 50 0 0 chr2L 10474774 10474814 -12536730 + AT_rich Low_complexity Low_complexity 1 40 0 4 664 180 0 0 0 chr2L 10476037 10476057 -12535487 + (GAGTG)n Simple_repeat Simple_repeat 3 22 0 4 664 204 143 0 0 chr2L 10476207 10476249 -12535295 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 664 26 82 0 0 chr2L 10477713 10477774 -12533770 + AT_rich Low_complexity Low_complexity 1 61 0 4 664 182 118 29 0 chr2L 10478959 10478993 -12532551 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 665 39 0 0 0 chr2L 10492737 10492776 -12518768 + AT_rich Low_complexity Low_complexity 1 39 0 4 665 21 0 0 0 chr2L 10496060 10496081 -12515463 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 24 53 0 0 chr2L 10496164 10496202 -12515342 + AT_rich Low_complexity Low_complexity 1 38 0 4 665 27 0 0 0 chr2L 10496852 10496879 -12514665 + AT_rich Low_complexity Low_complexity 1 27 0 4 665 22 0 0 0 chr2L 10496913 10496935 -12514609 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 186 71 0 0 chr2L 10499811 10499839 -12511705 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 665 209 95 71 0 chr2L 10500298 10500340 -12511204 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 665 192 40 0 0 chr2L 10502872 10502897 -12508647 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 4 665 252 0 0 0 chr2L 10504021 10504049 -12507495 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 665 219 189 0 0 chr2L 10506249 10506302 -12505242 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 665 21 71 0 0 chr2L 10515649 10515691 -12495853 + AT_rich Low_complexity Low_complexity 1 42 0 4 665 21 0 0 0 chr2L 10522119 10522140 -12489404 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 23 0 0 0 chr2L 10522693 10522716 -12488828 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 211 208 0 20 chr2L 10524473 10524522 -12487022 + CT-rich Low_complexity Low_complexity 2 49 0 4 665 252 0 0 0 chr2L 10524631 10524659 -12486885 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 665 21 0 0 0 chr2L 10524747 10524768 -12486776 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 22 35 0 0 chr2L 10525677 10525706 -12485838 + AT_rich Low_complexity Low_complexity 1 29 0 4 665 24 0 0 0 chr2L 10528054 10528078 -12483466 + AT_rich Low_complexity Low_complexity 1 24 0 4 665 21 0 0 0 chr2L 10530833 10530854 -12480690 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 29 28 0 0 chr2L 10533755 10533791 -12477753 + AT_rich Low_complexity Low_complexity 1 36 0 4 665 243 0 0 0 chr2L 10534101 10534128 -12477416 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 665 23 0 0 0 chr2L 10534548 10534571 -12476973 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 24 32 0 0 chr2L 10535113 10535144 -12476400 + AT_rich Low_complexity Low_complexity 1 31 0 4 665 213 65 0 0 chr2L 10536988 10537019 -12474525 + (A)n Simple_repeat Simple_repeat 1 31 0 4 665 222 171 0 0 chr2L 10537186 10537227 -12474317 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 665 35 63 0 0 chr2L 10538907 10538970 -12472574 + AT_rich Low_complexity Low_complexity 1 63 0 4 665 180 0 0 0 chr2L 10539553 10539573 -12471971 + (C)n Simple_repeat Simple_repeat 1 20 0 4 665 183 42 0 0 chr2L 10539697 10539721 -12471823 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 665 36 0 0 0 chr2L 10544463 10544499 -12467045 + AT_rich Low_complexity Low_complexity 1 36 0 4 665 217 156 22 0 chr2L 10544656 10544701 -12466843 + A-rich Low_complexity Low_complexity 6 51 0 4 665 22 0 0 0 chr2L 10545008 10545030 -12466514 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 27 29 0 0 chr2L 10548644 10548678 -12462866 + AT_rich Low_complexity Low_complexity 1 34 0 4 665 21 0 0 0 chr2L 10552495 10552516 -12459028 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 23 33 0 0 chr2L 10552768 10552798 -12458746 + AT_rich Low_complexity Low_complexity 1 30 0 4 665 24 0 0 0 chr2L 10553427 10553451 -12458093 + AT_rich Low_complexity Low_complexity 1 24 0 4 665 22 0 0 0 chr2L 10553922 10553944 -12457600 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 24 53 0 0 chr2L 10554351 10554389 -12457155 + AT_rich Low_complexity Low_complexity 1 38 0 4 665 23 0 0 0 chr2L 10556424 10556447 -12455097 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 207 100 0 0 chr2L 10559570 10559600 -12451944 + (CGAAA)n Simple_repeat Simple_repeat 1 30 0 4 665 24 53 0 0 chr2L 10559947 10559985 -12451559 + AT_rich Low_complexity Low_complexity 1 38 0 4 665 230 185 19 0 chr2L 10560542 10560596 -12450948 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 665 319 302 21 0 chr2L 10561387 10561483 -12450061 + (CGGA)n Simple_repeat Simple_repeat 3 100 0 4 665 22 56 0 0 chr2L 10562067 10562103 -12449441 + AT_rich Low_complexity Low_complexity 1 36 0 4 665 219 36 0 0 chr2L 10573387 10573415 -12438129 + (ATG)n Simple_repeat Simple_repeat 3 30 0 4 665 348 119 0 0 chr2L 10574257 10574316 -12437228 + (CAGT)n Simple_repeat Simple_repeat 1 59 0 4 665 180 0 0 0 chr2L 10578569 10578589 -12432955 + (T)n Simple_repeat Simple_repeat 1 20 0 4 665 37 97 0 0 chr2L 10578902 10579016 -12432528 + AT_rich Low_complexity Low_complexity 1 114 0 4 665 189 74 0 0 chr2L 10579372 10579399 -12432145 + (TTA)n Simple_repeat Simple_repeat 2 28 0 4 665 222 91 0 0 chr2L 10579494 10579527 -12432017 + (CAGTT)n Simple_repeat Simple_repeat 4 36 0 4 665 22 0 0 0 chr2L 10581210 10581232 -12430312 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 231 204 0 0 chr2L 10585236 10585290 -12426254 + (CAG)n Simple_repeat Simple_repeat 2 55 0 4 665 207 114 0 0 chr2L 10585667 10585702 -12425842 + (GTATG)n Simple_repeat Simple_repeat 4 38 0 4 665 23 0 0 0 chr2L 10588937 10588960 -12422584 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 192 40 0 0 chr2L 10590814 10590839 -12420705 + (TGAG)n Simple_repeat Simple_repeat 4 28 0 4 665 30 27 0 0 chr2L 10592745 10592782 -12418762 + AT_rich Low_complexity Low_complexity 1 37 0 4 665 4816 2 0 0 chr2L 10592896 10593414 -12418130 - NOMAD_LTR LTR Gypsy 0 518 1 4 665 61552 0 1 0 chr2L 10593414 10599983 -12411561 - NOMAD_I LTR Gypsy 0 6572 1 4 665 4816 2 0 0 chr2L 10599983 10600501 -12411043 - NOMAD_LTR LTR Gypsy 0 518 1 4 665 198 103 0 0 chr2L 10601302 10601331 -12410213 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 4 665 204 40 0 0 chr2L 10603158 10603183 -12408361 + (A)n Simple_repeat Simple_repeat 1 25 0 4 665 201 121 0 0 chr2L 10610118 10610151 -12401393 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 665 227 263 0 0 chr2L 10611457 10611514 -12400030 + (TTG)n Simple_repeat Simple_repeat 1 57 0 4 665 214 158 0 0 chr2L 10613076 10613114 -12398430 + (GGTTG)n Simple_repeat Simple_repeat 2 39 0 4 666 25 51 0 0 chr2L 10620240 10620279 -12391265 + AT_rich Low_complexity Low_complexity 1 39 0 4 666 226 216 0 0 chr2L 10621624 10621675 -12389869 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 666 21 0 0 0 chr2L 10622853 10622874 -12388670 + AT_rich Low_complexity Low_complexity 1 21 0 4 666 21 57 0 0 chr2L 10628121 10628156 -12383388 + AT_rich Low_complexity Low_complexity 1 35 0 4 666 22 35 0 0 chr2L 10631369 10631398 -12380146 + AT_rich Low_complexity Low_complexity 1 29 0 4 666 22 0 0 0 chr2L 10634004 10634026 -12377518 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 180 179 0 0 chr2L 10637519 10637558 -12373986 + (CGGAG)n Simple_repeat Simple_repeat 2 40 0 4 666 23 33 0 0 chr2L 10637781 10637811 -12373733 + AT_rich Low_complexity Low_complexity 1 30 0 4 666 24 21 0 60 chr2L 10643462 10643512 -12368032 + AT_rich Low_complexity Low_complexity 1 47 0 4 666 215 29 88 0 chr2L 10646057 10646091 -12365453 + (TTATA)n Simple_repeat Simple_repeat 5 41 0 4 666 25 0 0 0 chr2L 10650140 10650165 -12361379 + AT_rich Low_complexity Low_complexity 1 25 0 4 666 28 71 0 0 chr2L 10658102 10658158 -12353386 + AT_rich Low_complexity Low_complexity 1 56 0 4 666 25 0 0 0 chr2L 10658324 10658349 -12353195 + AT_rich Low_complexity Low_complexity 1 25 0 4 666 23 33 0 0 chr2L 10666441 10666471 -12345073 + AT_rich Low_complexity Low_complexity 1 30 0 4 666 21 0 0 0 chr2L 10668538 10668559 -12342985 + AT_rich Low_complexity Low_complexity 1 21 0 4 666 180 77 0 0 chr2L 10673197 10673223 -12338321 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 4 666 24 32 0 0 chr2L 10675487 10675518 -12336026 + AT_rich Low_complexity Low_complexity 1 31 0 4 666 205 245 0 0 chr2L 10679193 10679246 -12332298 + (CCA)n Simple_repeat Simple_repeat 3 55 0 4 666 22 0 0 0 chr2L 10679662 10679684 -12331860 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 180 125 0 0 chr2L 10680092 10680124 -12331420 + (A)n Simple_repeat Simple_repeat 1 32 0 4 666 46 54 0 0 chr2L 10681497 10681571 -12329973 + AT_rich Low_complexity Low_complexity 1 74 0 4 666 213 180 0 0 chr2L 10682071 10682121 -12329423 + (TGG)n Simple_repeat Simple_repeat 2 51 0 4 666 33 0 0 0 chr2L 10682629 10682662 -12328882 + AT_rich Low_complexity Low_complexity 1 33 0 4 666 433 123 239 90 chr2L 10683114 10683248 -12328296 - DNAREP1_DM LINE Penelope -440 154 1 4 666 33 0 0 0 chr2L 10683774 10683807 -12327737 + AT_rich Low_complexity Low_complexity 1 33 0 4 666 22 0 0 0 chr2L 10684470 10684492 -12327052 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 27 73 0 0 chr2L 10685470 10685525 -12326019 + AT_rich Low_complexity Low_complexity 1 55 0 4 666 21 0 0 0 chr2L 10686379 10686400 -12325144 + AT_rich Low_complexity Low_complexity 1 21 0 4 666 22 35 0 0 chr2L 10687533 10687562 -12323982 + AT_rich Low_complexity Low_complexity 1 29 0 4 666 26 0 0 0 chr2L 10687657 10687683 -12323861 + AT_rich Low_complexity Low_complexity 1 26 0 4 666 21 57 0 0 chr2L 10688449 10688484 -12323060 + AT_rich Low_complexity Low_complexity 1 35 0 4 666 21 57 0 0 chr2L 10688689 10688724 -12322820 + AT_rich Low_complexity Low_complexity 1 35 0 4 666 224 391 0 0 chr2L 10688925 10689104 -12322440 + (CCG)n Simple_repeat Simple_repeat 1 179 0 4 666 23 86 0 0 chr2L 10689486 10689544 -12322000 + AT_rich Low_complexity Low_complexity 1 58 0 4 666 27 0 0 0 chr2L 10689700 10689727 -12321817 + AT_rich Low_complexity Low_complexity 1 27 0 4 666 192 97 0 0 chr2L 10691195 10691226 -12320318 + (T)n Simple_repeat Simple_repeat 1 31 0 4 666 22 0 0 0 chr2L 10691919 10691941 -12319603 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 273 75 0 0 chr2L 10693175 10693215 -12318329 + (CCG)n Simple_repeat Simple_repeat 1 40 0 4 666 268 356 0 0 chr2L 10693506 10693641 -12317903 + (CCG)n Simple_repeat Simple_repeat 1 135 0 4 666 25 0 0 0 chr2L 10699387 10699412 -12312132 + AT_rich Low_complexity Low_complexity 1 25 0 4 666 255 133 0 0 chr2L 10701231 10701276 -12310268 + (TCC)n Simple_repeat Simple_repeat 2 46 0 4 666 21 57 0 0 chr2L 10702235 10702270 -12309274 + AT_rich Low_complexity Low_complexity 1 35 0 4 666 35 83 0 0 chr2L 10703014 10703098 -12308446 + AT_rich Low_complexity Low_complexity 1 84 0 4 666 31 58 0 0 chr2L 10705914 10705966 -12305578 + AT_rich Low_complexity Low_complexity 1 52 0 4 666 22 0 0 0 chr2L 10706956 10706978 -12304566 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 22 0 0 0 chr2L 10707343 10707365 -12304179 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 216 98 0 68 chr2L 10711464 10711508 -12300036 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 4 666 216 135 0 0 chr2L 10712724 10712761 -12298783 + (T)n Simple_repeat Simple_repeat 1 37 0 4 666 200 200 0 0 chr2L 10720648 10720688 -12290856 + (CAGT)n Simple_repeat Simple_repeat 1 40 0 4 666 33 85 0 0 chr2L 10721566 10721648 -12289896 + AT_rich Low_complexity Low_complexity 1 82 0 4 666 50 65 0 0 chr2L 10721797 10721889 -12289655 + AT_rich Low_complexity Low_complexity 1 92 0 4 666 28 0 0 0 chr2L 10723660 10723688 -12287856 + AT_rich Low_complexity Low_complexity 1 28 0 4 666 238 237 71 20 chr2L 10725224 10725323 -12286221 + ROO_I LTR Pao 643 746 -7510 4 666 289 200 0 54 chr2L 10725397 10725471 -12286073 - ROO_I LTR Pao -7525 731 662 4 666 23 0 0 0 chr2L 10725864 10725887 -12285657 + AT_rich Low_complexity Low_complexity 1 23 0 4 666 27 0 0 0 chr2L 10737089 10737116 -12274428 + AT_rich Low_complexity Low_complexity 1 27 0 4 666 25 31 0 0 chr2L 10737203 10737235 -12274309 + AT_rich Low_complexity Low_complexity 1 32 0 4 666 228 67 0 0 chr2L 10738259 10738289 -12273255 + (CGA)n Simple_repeat Simple_repeat 2 31 0 4 666 349 221 0 0 chr2L 10739664 10739768 -12271776 + ROO_I LTR Pao 639 742 -7514 4 666 200 268 0 0 chr2L 10741409 10741465 -12270079 + (CTG)n Simple_repeat Simple_repeat 2 57 0 4 666 218 250 0 0 chr2L 10741955 10742011 -12269533 + CT-rich Low_complexity Low_complexity 3 58 0 4 666 227 31 0 30 chr2L 10746428 10746461 -12265083 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 666 183 80 0 0 chr2L 10747134 10747159 -12264385 + (T)n Simple_repeat Simple_repeat 1 25 0 4 667 22 56 0 0 chr2L 10749996 10750032 -12261512 + AT_rich Low_complexity Low_complexity 1 36 0 4 667 206 32 32 0 chr2L 10750413 10750444 -12261100 + (TAAAAA)n Simple_repeat Simple_repeat 2 33 0 4 667 29 0 0 0 chr2L 10754551 10754580 -12256964 + AT_rich Low_complexity Low_complexity 1 29 0 4 667 26 82 0 0 chr2L 10755841 10755902 -12255642 + AT_rich Low_complexity Low_complexity 1 61 0 4 667 225 65 0 0 chr2L 10756058 10756089 -12255455 + (CTG)n Simple_repeat Simple_repeat 3 33 0 4 667 282 132 0 0 chr2L 10762841 10762894 -12248650 + (CAG)n Simple_repeat Simple_repeat 1 53 0 4 667 249 146 0 0 chr2L 10763008 10763056 -12248488 + (CAG)n Simple_repeat Simple_repeat 3 50 0 4 667 30 0 0 0 chr2L 10763334 10763364 -12248180 + AT_rich Low_complexity Low_complexity 1 30 0 4 667 25 0 0 0 chr2L 10765008 10765033 -12246511 + AT_rich Low_complexity Low_complexity 1 25 0 4 667 22 0 0 0 chr2L 10766008 10766030 -12245514 + AT_rich Low_complexity Low_complexity 1 22 0 4 667 270 213 0 31 chr2L 10774294 10774391 -12237153 - ROO_I LTR Pao -7521 735 642 4 667 28 0 0 0 chr2L 10777390 10777418 -12234126 + AT_rich Low_complexity Low_complexity 1 28 0 4 667 204 40 0 0 chr2L 10781363 10781388 -12230156 + (CAAAC)n Simple_repeat Simple_repeat 5 29 0 4 667 216 67 0 0 chr2L 10784849 10784879 -12226665 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 4 667 247 260 0 14 chr2L 10786058 10786132 -12225412 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 667 21 0 0 0 chr2L 10786844 10786865 -12224679 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 25 31 0 0 chr2L 10787431 10787463 -12224081 + AT_rich Low_complexity Low_complexity 1 32 0 4 667 247 200 0 0 chr2L 10794179 10794234 -12217310 + A-rich Low_complexity Low_complexity 1 55 0 4 667 198 0 0 0 chr2L 10799846 10799868 -12211676 + (CCG)n Simple_repeat Simple_repeat 3 24 0 4 667 29 78 0 0 chr2L 10801384 10801448 -12210096 + AT_rich Low_complexity Low_complexity 1 64 0 4 667 22 56 0 0 chr2L 10809423 10809459 -12202085 + AT_rich Low_complexity Low_complexity 1 36 0 4 667 207 0 0 0 chr2L 10811344 10811367 -12200177 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 667 24 0 0 0 chr2L 10811797 10811821 -12199723 + AT_rich Low_complexity Low_complexity 1 24 0 4 667 21 0 0 0 chr2L 10815302 10815323 -12196221 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 183 42 0 0 chr2L 10815896 10815920 -12195624 + (CAT)n Simple_repeat Simple_repeat 2 25 0 4 667 222 37 0 0 chr2L 10816839 10816866 -12194678 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 4 667 23 33 0 0 chr2L 10817606 10817636 -12193908 + AT_rich Low_complexity Low_complexity 1 30 0 4 667 216 267 0 16 chr2L 10830255 10830316 -12181228 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 667 405 109 0 0 chr2L 10831795 10831859 -12179685 + (CTG)n Simple_repeat Simple_repeat 3 66 0 4 667 21 0 0 0 chr2L 10833255 10833276 -12178268 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 22 0 0 0 chr2L 10835249 10835271 -12176273 + AT_rich Low_complexity Low_complexity 1 22 0 4 667 21 0 0 0 chr2L 10837978 10837999 -12173545 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 208 250 0 0 chr2L 10841576 10841632 -12169912 + T-rich Low_complexity Low_complexity 6 61 0 4 667 306 132 0 0 chr2L 10841646 10841699 -12169845 + (TTG)n Simple_repeat Simple_repeat 1 53 0 4 667 233 226 0 0 chr2L 10841768 10841852 -12169692 - ROO_I LTR Pao -7523 733 650 4 667 214 286 0 0 chr2L 10841981 10842044 -12169500 + (CTG)n Simple_repeat Simple_repeat 1 63 0 4 667 21 0 0 0 chr2L 10843019 10843040 -12168504 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 219 69 0 0 chr2L 10847779 10847808 -12163736 + (TTG)n Simple_repeat Simple_repeat 1 29 0 4 667 32 75 0 0 chr2L 10849396 10849463 -12162081 + AT_rich Low_complexity Low_complexity 1 67 0 4 667 26 50 0 0 chr2L 10857989 10858029 -12153515 + AT_rich Low_complexity Low_complexity 1 40 0 4 667 36 53 0 0 chr2L 10858376 10858433 -12153111 + AT_rich Low_complexity Low_complexity 1 57 0 4 667 202 297 0 0 chr2L 10861059 10861133 -12150411 + (CAG)n Simple_repeat Simple_repeat 1 74 0 4 667 22 35 0 0 chr2L 10862190 10862219 -12149325 + AT_rich Low_complexity Low_complexity 1 29 0 4 667 14166 3 0 0 chr2L 10862908 10864437 -12147107 - DMRT1B LINE R1 0 5183 3655 4 667 234 62 0 0 chr2L 10865166 10865198 -12146346 + (T)n Simple_repeat Simple_repeat 1 32 0 4 667 229 311 19 0 chr2L 10866468 10866574 -12144970 + (CATATA)n Simple_repeat Simple_repeat 3 110 0 4 667 23 86 0 0 chr2L 10866659 10866717 -12144827 + AT_rich Low_complexity Low_complexity 1 58 0 4 667 208 111 56 0 chr2L 10868123 10868159 -12143385 + (CATATA)n Simple_repeat Simple_repeat 6 43 0 4 667 23 0 0 0 chr2L 10869879 10869902 -12141642 + AT_rich Low_complexity Low_complexity 1 23 0 4 667 28 29 0 0 chr2L 10870668 10870703 -12140841 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 34 72 0 0 chr2L 10871852 10871921 -12139623 + AT_rich Low_complexity Low_complexity 1 69 0 4 667 24 32 0 0 chr2L 10872380 10872411 -12139133 + AT_rich Low_complexity Low_complexity 1 31 0 4 667 3605 5 7 7 chr2L 10876597 10877011 -12134533 + DM297_LTR LTR Gypsy 1 414 0 4 83 54384 7 0 1 chr2L 10877011 10883182 -12128362 + DM297_I LTR Gypsy 1 6167 0 4 668 3597 5 7 7 chr2L 10883182 10883595 -12127949 + DM297_LTR LTR Gypsy 1 413 -1 4 668 240 86 0 0 chr2L 10883595 10883630 -12127914 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 668 33 43 0 0 chr2L 10889992 10890039 -12121505 + AT_rich Low_complexity Low_complexity 1 47 0 4 668 180 77 0 0 chr2L 10894826 10894852 -12116692 + (TATG)n Simple_repeat Simple_repeat 2 27 0 4 668 220 234 0 0 chr2L 10896207 10896254 -12115290 + A-rich Low_complexity Low_complexity 1 47 0 4 668 204 211 0 0 chr2L 10896584 10896622 -12114922 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 668 212 200 48 36 chr2L 10897888 10897971 -12113573 + (TATATG)n Simple_repeat Simple_repeat 4 87 0 4 668 334 183 197 0 chr2L 10901844 10901915 -12109629 + DNAREP1_DM LINE Penelope 406 490 -104 4 668 237 231 0 0 chr2L 10904012 10904101 -12107443 + GA-rich Low_complexity Low_complexity 1 89 0 4 668 21 36 0 0 chr2L 10904694 10904722 -12106822 + AT_rich Low_complexity Low_complexity 1 28 0 4 668 210 118 0 0 chr2L 10906795 10906829 -12104715 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 668 25 0 0 0 chr2L 10908755 10908780 -12102764 + AT_rich Low_complexity Low_complexity 1 25 0 4 668 22 0 0 0 chr2L 10908949 10908971 -12102573 + AT_rich Low_complexity Low_complexity 1 22 0 4 668 39 50 0 0 chr2L 10912394 10912454 -12099090 + AT_rich Low_complexity Low_complexity 1 60 0 4 668 256 241 0 17 chr2L 10912518 10912577 -12098967 + DNAREP1_DM LINE Penelope 5 62 -532 4 668 192 40 0 0 chr2L 10913276 10913301 -12098243 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 668 21 0 0 0 chr2L 10913802 10913823 -12097721 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 73 12 0 0 chr2L 10915135 10915215 -12096329 + AT_rich Low_complexity Low_complexity 1 80 0 4 668 243 133 0 0 chr2L 10916421 10916466 -12095078 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 668 22 0 0 0 chr2L 10917305 10917327 -12094217 + AT_rich Low_complexity Low_complexity 1 22 0 4 668 258 105 0 0 chr2L 10927443 10927481 -12084063 + (TTG)n Simple_repeat Simple_repeat 1 38 0 4 668 186 133 0 0 chr2L 10931887 10931917 -12079627 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 668 203 189 19 0 chr2L 10933365 10933418 -12078126 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 668 180 0 0 0 chr2L 10934136 10934156 -12077388 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 668 204 125 0 0 chr2L 10934457 10934489 -12077055 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 668 273 57 0 0 chr2L 10935460 10935495 -12076049 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 4 668 30 27 0 0 chr2L 10940194 10940231 -12071313 + AT_rich Low_complexity Low_complexity 1 37 0 4 668 25 31 0 0 chr2L 10940497 10940529 -12071015 + AT_rich Low_complexity Low_complexity 1 32 0 4 668 200 200 55 0 chr2L 10942320 10942375 -12069169 + (CATATA)n Simple_repeat Simple_repeat 1 58 0 4 668 24 0 0 0 chr2L 10943054 10943078 -12068466 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 21 0 0 0 chr2L 10943265 10943286 -12068258 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 258 32 0 0 chr2L 10945133 10945164 -12066380 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 668 251 246 0 0 chr2L 10946667 10946728 -12064816 + (GGATG)n Simple_repeat Simple_repeat 1 61 0 4 668 3766 0 0 0 chr2L 10946998 10947426 -12064118 + ROO_LTR LTR Pao 1 428 0 4 668 70218 0 0 6 chr2L 10947426 10955727 -12055817 + ROO_I LTR Pao 1 8256 0 4 668 3766 0 0 0 chr2L 10955727 10956155 -12055389 + ROO_LTR LTR Pao 1 428 0 4 668 26 0 0 0 chr2L 10958200 10958226 -12053318 + AT_rich Low_complexity Low_complexity 1 26 0 4 668 22 70 0 0 chr2L 10962997 10963040 -12048504 + AT_rich Low_complexity Low_complexity 1 43 0 4 668 22 35 0 0 chr2L 10964472 10964501 -12047043 + AT_rich Low_complexity Low_complexity 1 29 0 4 668 205 291 11 11 chr2L 10967401 10967488 -12044056 + GA-rich Low_complexity Low_complexity 3 89 0 4 668 192 77 0 0 chr2L 10972726 10972752 -12038792 + (CAG)n Simple_repeat Simple_repeat 2 27 0 4 668 222 216 0 0 chr2L 10972939 10972990 -12038554 + (CCA)n Simple_repeat Simple_repeat 1 51 0 4 668 28 29 0 0 chr2L 10975352 10975387 -12036157 + AT_rich Low_complexity Low_complexity 1 35 0 4 668 21 0 0 0 chr2L 10975413 10975434 -12036110 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 34 24 0 0 chr2L 10975493 10975534 -12036010 + AT_rich Low_complexity Low_complexity 1 41 0 4 668 24 32 0 0 chr2L 10975634 10975665 -12035879 + AT_rich Low_complexity Low_complexity 1 31 0 4 668 42 20 0 0 chr2L 10976541 10976590 -12034954 + AT_rich Low_complexity Low_complexity 1 49 0 4 668 34 55 0 0 chr2L 10976643 10976698 -12034846 + AT_rich Low_complexity Low_complexity 1 55 0 4 668 24 0 0 0 chr2L 10977824 10977848 -12033696 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 23 33 0 0 chr2L 10984344 10984374 -12027170 + AT_rich Low_complexity Low_complexity 1 30 0 4 668 1018 157 49 66 chr2L 10984382 10984668 -12026876 - DNAREP1_DM LINE Penelope -287 307 27 4 668 519 141 336 0 chr2L 10984714 10984863 -12026681 - DMCR1A LINE CR1 -476 3994 3796 4 668 23 0 0 0 chr2L 10986161 10986184 -12025360 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 26 30 0 0 chr2L 10986403 10986436 -12025108 + AT_rich Low_complexity Low_complexity 1 33 0 4 668 473 137 326 8 chr2L 10986682 10986814 -12024730 - DNAREP1_DM LINE Penelope -2 592 419 4 668 22 0 0 0 chr2L 10986904 10986926 -12024618 + AT_rich Low_complexity Low_complexity 1 22 0 4 668 21 71 0 0 chr2L 10987576 10987618 -12023926 + AT_rich Low_complexity Low_complexity 1 42 0 4 668 26 93 0 0 chr2L 10987639 10987714 -12023830 + AT_rich Low_complexity Low_complexity 1 75 0 4 668 29 60 0 0 chr2L 10994997 10995047 -12016497 + AT_rich Low_complexity Low_complexity 1 50 0 4 668 25 0 0 0 chr2L 10995397 10995422 -12016122 + AT_rich Low_complexity Low_complexity 1 25 0 4 668 192 40 0 0 chr2L 10995469 10995494 -12016050 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 4 668 23 33 0 0 chr2L 10995957 10995987 -12015557 + AT_rich Low_complexity Low_complexity 1 30 0 4 668 25 65 0 0 chr2L 10996434 10996480 -12015064 + AT_rich Low_complexity Low_complexity 1 46 0 4 668 23 0 0 0 chr2L 10996551 10996574 -12014970 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 27 29 0 0 chr2L 11001601 11001635 -12009909 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 24 0 0 0 chr2L 11004669 11004693 -12006851 + AT_rich Low_complexity Low_complexity 1 24 0 4 669 23 60 0 43 chr2L 11011145 11011215 -12000329 + AT_rich Low_complexity Low_complexity 1 67 0 4 669 22 0 0 0 chr2L 11013605 11013627 -11997917 + AT_rich Low_complexity Low_complexity 1 22 0 4 669 21 0 0 0 chr2L 11013673 11013694 -11997850 + AT_rich Low_complexity Low_complexity 1 21 0 4 669 219 139 0 0 chr2L 11014306 11014342 -11997202 + (CTG)n Simple_repeat Simple_repeat 3 38 0 4 669 302 292 0 10 chr2L 11014360 11014457 -11997087 + (CTG)n Simple_repeat Simple_repeat 3 98 0 4 669 294 50 0 0 chr2L 11015242 11015282 -11996262 + (CTG)n Simple_repeat Simple_repeat 3 42 0 4 669 207 69 0 0 chr2L 11015796 11015825 -11995719 + (TGG)n Simple_repeat Simple_repeat 1 29 0 4 669 613 0 26 0 chr2L 11016706 11016783 -11994761 + (TTA)n Simple_repeat Simple_repeat 3 81 0 4 669 363 141 0 0 chr2L 11021097 11021161 -11990383 + (CCAA)n Simple_repeat Simple_repeat 4 67 0 4 669 29 0 0 0 chr2L 11022637 11022666 -11988878 + AT_rich Low_complexity Low_complexity 1 29 0 4 669 183 184 0 0 chr2L 11023418 11023456 -11988088 + (CGA)n Simple_repeat Simple_repeat 2 39 0 4 669 222 62 0 0 chr2L 11023484 11023516 -11988028 + (CACTC)n Simple_repeat Simple_repeat 2 33 0 4 669 210 71 0 0 chr2L 11023850 11023878 -11987666 + (GTTTG)n Simple_repeat Simple_repeat 5 32 0 4 669 240 86 0 0 chr2L 11024560 11024595 -11986949 + (CTG)n Simple_repeat Simple_repeat 2 36 0 4 669 222 128 0 0 chr2L 11025508 11025547 -11985997 + (CACTC)n Simple_repeat Simple_repeat 4 42 0 4 669 208 143 0 0 chr2L 11025992 11026027 -11985517 + (T)n Simple_repeat Simple_repeat 1 35 0 4 669 258 95 0 0 chr2L 11026155 11026197 -11985347 + (CAAAC)n Simple_repeat Simple_repeat 2 43 0 4 669 201 39 0 0 chr2L 11027670 11027696 -11983848 + (CAG)n Simple_repeat Simple_repeat 3 28 0 4 669 213 94 0 0 chr2L 11028135 11028167 -11983377 + (AACTG)n Simple_repeat Simple_repeat 3 34 0 4 669 268 191 0 0 chr2L 11029439 11029502 -11982042 - ROO_I LTR Pao -7542 714 652 4 669 271 167 15 0 chr2L 11030770 11030836 -11980708 - ROO_I LTR Pao -7515 741 675 4 669 204 40 0 0 chr2L 11030940 11030965 -11980579 + (ATG)n Simple_repeat Simple_repeat 1 25 0 4 669 243 224 0 0 chr2L 11031010 11031059 -11980485 + (CTG)n Simple_repeat Simple_repeat 1 49 0 4 669 24 32 0 0 chr2L 11032315 11032346 -11979198 + AT_rich Low_complexity Low_complexity 1 31 0 4 669 214 261 0 0 chr2L 11032829 11032894 -11978650 + T-rich Low_complexity Low_complexity 1 65 0 4 669 24 53 0 0 chr2L 11033657 11033695 -11977849 + AT_rich Low_complexity Low_complexity 1 38 0 4 669 22 35 0 0 chr2L 11034670 11034699 -11976845 + AT_rich Low_complexity Low_complexity 1 29 0 4 669 25 0 0 0 chr2L 11035246 11035271 -11976273 + AT_rich Low_complexity Low_complexity 1 25 0 4 669 260 270 22 0 chr2L 11035610 11035699 -11975845 - ROO_I LTR Pao -7505 751 661 4 669 186 71 0 0 chr2L 11035912 11035940 -11975604 + (CCA)n Simple_repeat Simple_repeat 2 29 0 4 669 25 0 0 0 chr2L 11038785 11038810 -11972734 + AT_rich Low_complexity Low_complexity 1 25 0 4 669 201 74 0 0 chr2L 11039086 11039113 -11972431 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 669 213 39 0 0 chr2L 11042779 11042805 -11968739 + (GAGTG)n Simple_repeat Simple_repeat 5 30 0 4 669 31 0 0 0 chr2L 11043015 11043046 -11968498 + AT_rich Low_complexity Low_complexity 1 31 0 4 669 186 191 0 0 chr2L 11045101 11045143 -11966401 + (CAA)n Simple_repeat Simple_repeat 1 42 0 4 669 194 217 0 14 chr2L 11045279 11045349 -11966195 + CT-rich Low_complexity Low_complexity 1 69 0 4 669 219 233 0 48 chr2L 11045484 11045547 -11965997 + (CATA)n Simple_repeat Simple_repeat 1 60 0 4 669 201 213 0 0 chr2L 11046787 11046834 -11964710 + (ATG)n Simple_repeat Simple_repeat 2 48 0 4 669 242 228 0 17 chr2L 11046941 11046999 -11964545 + (ATG)n Simple_repeat Simple_repeat 2 58 0 4 669 207 0 0 0 chr2L 11049430 11049453 -11962091 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 669 22 35 0 0 chr2L 11050395 11050424 -11961120 + AT_rich Low_complexity Low_complexity 1 29 0 4 669 21 36 0 0 chr2L 11050767 11050795 -11960749 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 221 0 0 33 chr2L 11052924 11052954 -11958590 + (CAAAG)n Simple_repeat Simple_repeat 1 29 0 4 669 186 71 0 0 chr2L 11053018 11053046 -11958498 + (CGGAA)n Simple_repeat Simple_repeat 1 28 0 4 669 198 0 0 0 chr2L 11058219 11058241 -11953303 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 669 255 152 0 0 chr2L 11059619 11059665 -11951879 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 4 669 198 174 0 0 chr2L 11061047 11061093 -11950451 + (CAGT)n Simple_repeat Simple_repeat 1 46 0 4 669 225 125 83 0 chr2L 11061230 11061278 -11950266 + (ACCG)n Simple_repeat Simple_repeat 4 55 0 4 669 22 0 0 0 chr2L 11062859 11062881 -11948663 + AT_rich Low_complexity Low_complexity 1 22 0 4 669 200 213 0 0 chr2L 11063438 11063485 -11948059 + A-rich Low_complexity Low_complexity 1 47 0 4 669 210 37 0 0 chr2L 11063697 11063724 -11947820 + (TAA)n Simple_repeat Simple_repeat 2 28 0 4 669 189 94 0 0 chr2L 11063835 11063867 -11947677 + (T)n Simple_repeat Simple_repeat 1 32 0 4 669 221 154 0 37 chr2L 11064351 11064405 -11947139 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 4 669 26 30 0 0 chr2L 11065631 11065664 -11945880 + AT_rich Low_complexity Low_complexity 1 33 0 4 669 22 35 0 0 chr2L 11068604 11068633 -11942911 + AT_rich Low_complexity Low_complexity 1 29 0 4 669 203 88 0 29 chr2L 11068864 11068899 -11942645 + (TCC)n Simple_repeat Simple_repeat 1 34 0 4 669 288 53 0 0 chr2L 11070025 11070063 -11941481 + (ATG)n Simple_repeat Simple_repeat 1 38 0 4 669 234 116 0 0 chr2L 11070458 11070501 -11941043 + (GAGTG)n Simple_repeat Simple_repeat 3 45 0 4 669 24 0 0 0 chr2L 11070807 11070831 -11940713 + AT_rich Low_complexity Low_complexity 1 24 0 4 669 22 0 0 0 chr2L 11071454 11071476 -11940068 + AT_rich Low_complexity Low_complexity 1 22 0 4 669 31 44 0 0 chr2L 11073449 11073494 -11938050 + AT_rich Low_complexity Low_complexity 1 45 0 4 669 242 281 0 0 chr2L 11074765 11074822 -11936722 + (TTGGGG)n Simple_repeat Simple_repeat 2 58 0 4 669 43 14 0 65 chr2L 11075962 11076039 -11935505 + AT_rich Low_complexity Low_complexity 1 72 0 4 669 192 135 0 0 chr2L 11081463 11081500 -11930044 + (CAG)n Simple_repeat Simple_repeat 3 39 0 4 669 45 0 0 0 chr2L 11082551 11082596 -11928948 + AT_rich Low_complexity Low_complexity 1 45 0 4 669 28 61 0 0 chr2L 11083052 11083101 -11928443 + AT_rich Low_complexity Low_complexity 1 49 0 4 669 26 30 0 0 chr2L 11086397 11086430 -11925114 + AT_rich Low_complexity Low_complexity 1 33 0 4 669 23 0 0 0 chr2L 11091105 11091128 -11920416 + AT_rich Low_complexity Low_complexity 1 23 0 4 669 23 33 0 0 chr2L 11091319 11091349 -11920195 + AT_rich Low_complexity Low_complexity 1 30 0 4 669 23 0 0 0 chr2L 11092178 11092201 -11919343 + AT_rich Low_complexity Low_complexity 1 23 0 4 669 213 231 0 0 chr2L 11095097 11095149 -11916395 + T-rich Low_complexity Low_complexity 1 52 0 4 669 210 167 56 0 chr2L 11095315 11095369 -11916175 + A-rich Low_complexity Low_complexity 6 62 0 4 669 25 0 0 0 chr2L 11097357 11097382 -11914162 + AT_rich Low_complexity Low_complexity 1 25 0 4 669 218 229 15 62 chr2L 11097474 11097539 -11914005 + (CTG)n Simple_repeat Simple_repeat 3 64 0 4 669 37 0 0 0 chr2L 11098996 11099033 -11912511 + AT_rich Low_complexity Low_complexity 1 37 0 4 669 23 0 0 0 chr2L 11099786 11099809 -11911735 + AT_rich Low_complexity Low_complexity 1 23 0 4 669 216 143 0 0 chr2L 11101802 11101844 -11909700 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 4 669 37 0 0 0 chr2L 11109698 11109735 -11901809 + AT_rich Low_complexity Low_complexity 1 37 0 4 669 23 33 0 0 chr2L 11110264 11110294 -11901250 + AT_rich Low_complexity Low_complexity 1 30 0 4 669 200 143 35 35 chr2L 11110609 11110667 -11900877 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 669 23 0 0 0 chr2L 11120561 11120584 -11890960 + AT_rich Low_complexity Low_complexity 1 23 0 4 669 25 31 0 0 chr2L 11123487 11123519 -11888025 + AT_rich Low_complexity Low_complexity 1 32 0 4 669 24 32 0 0 chr2L 11130441 11130472 -11881072 + AT_rich Low_complexity Low_complexity 1 31 0 4 669 339 136 0 0 chr2L 11134387 11134446 -11877098 + (CAG)n Simple_repeat Simple_repeat 2 60 0 4 669 21 0 0 0 chr2L 11136039 11136060 -11875484 + AT_rich Low_complexity Low_complexity 1 21 0 4 669 21 57 0 0 chr2L 11137097 11137132 -11874412 + AT_rich Low_complexity Low_complexity 1 35 0 5 670 27 0 0 0 chr2L 11141575 11141602 -11869942 + AT_rich Low_complexity Low_complexity 1 27 0 5 670 35 0 0 0 chr2L 11146623 11146658 -11864886 + AT_rich Low_complexity Low_complexity 1 35 0 5 670 21 36 0 0 chr2L 11151485 11151513 -11860031 + AT_rich Low_complexity Low_complexity 1 28 0 5 670 555 188 0 18 chr2L 11154024 11154138 -11857406 + DNAREP1_DM LINE Penelope 2 113 -481 5 670 464 154 165 33 chr2L 11154163 11154284 -11857260 + DNAREP1_DM LINE Penelope 424 560 -34 5 670 22 0 0 0 chr2L 11156107 11156129 -11855415 + AT_rich Low_complexity Low_complexity 1 22 0 5 670 22 35 0 0 chr2L 11157092 11157121 -11854423 + AT_rich Low_complexity Low_complexity 1 29 0 5 670 228 163 0 20 chr2L 11158687 11158737 -11852807 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 670 180 163 0 0 chr2L 11159080 11159123 -11852421 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 670 25 83 0 0 chr2L 11160660 11160720 -11850824 + AT_rich Low_complexity Low_complexity 1 60 0 5 670 25 0 0 0 chr2L 11163165 11163190 -11848354 + AT_rich Low_complexity Low_complexity 1 25 0 5 670 210 218 0 35 chr2L 11166904 11166961 -11844583 + (ATGGTG)n Simple_repeat Simple_repeat 1 55 0 5 670 180 228 0 0 chr2L 11167342 11167399 -11844145 + GA-rich Low_complexity Low_complexity 1 57 0 5 670 219 88 0 0 chr2L 11170639 11170673 -11840871 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 670 240 35 0 0 chr2L 11173039 11173068 -11838476 + (CATA)n Simple_repeat Simple_repeat 4 32 0 5 670 231 114 0 0 chr2L 11173236 11173271 -11838273 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 670 24 32 0 0 chr2L 11174882 11174913 -11836631 + AT_rich Low_complexity Low_complexity 1 31 0 5 670 45 34 0 0 chr2L 11176884 11176943 -11834601 + AT_rich Low_complexity Low_complexity 1 59 0 5 670 243 88 0 0 chr2L 11178312 11178346 -11833198 + (CAGTC)n Simple_repeat Simple_repeat 3 36 0 5 670 22 35 0 0 chr2L 11181164 11181193 -11830351 + AT_rich Low_complexity Low_complexity 1 29 0 5 670 210 91 0 0 chr2L 11181768 11181801 -11829743 + (TAG)n Simple_repeat Simple_repeat 2 34 0 5 670 24 0 0 0 chr2L 11182336 11182360 -11829184 + AT_rich Low_complexity Low_complexity 1 24 0 5 670 23 54 0 0 chr2L 11187111 11187148 -11824396 + AT_rich Low_complexity Low_complexity 1 37 0 5 670 26 0 0 0 chr2L 11190636 11190662 -11820882 + AT_rich Low_complexity Low_complexity 1 26 0 5 670 23 0 0 0 chr2L 11193095 11193118 -11818426 + AT_rich Low_complexity Low_complexity 1 23 0 5 670 261 227 0 0 chr2L 11194223 11194298 -11817246 + (CATG)n Simple_repeat Simple_repeat 4 78 0 5 670 34 24 0 0 chr2L 11195258 11195299 -11816245 + AT_rich Low_complexity Low_complexity 1 41 0 5 670 21 0 0 0 chr2L 11199341 11199362 -11812182 + AT_rich Low_complexity Low_complexity 1 21 0 5 670 23 0 0 0 chr2L 11199531 11199554 -11811990 + AT_rich Low_complexity Low_complexity 1 23 0 5 670 203 147 0 0 chr2L 11200400 11200434 -11811110 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 670 28 0 0 0 chr2L 11201073 11201101 -11810443 + AT_rich Low_complexity Low_complexity 1 28 0 5 670 203 0 37 0 chr2L 11204382 11204409 -11807135 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 670 22 0 0 0 chr2L 11205517 11205539 -11806005 + AT_rich Low_complexity Low_complexity 1 22 0 5 670 24 0 0 0 chr2L 11207244 11207268 -11804276 + AT_rich Low_complexity Low_complexity 1 24 0 5 670 226 259 0 0 chr2L 11208460 11208514 -11803030 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 670 240 59 0 0 chr2L 11210453 11210487 -11801057 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 670 27 0 0 0 chr2L 11210864 11210891 -11800653 + AT_rich Low_complexity Low_complexity 1 27 0 5 670 213 108 0 0 chr2L 11211400 11211437 -11800107 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 670 211 246 0 30 chr2L 11211629 11211696 -11799848 + CT-rich Low_complexity Low_complexity 3 67 0 5 670 14768 2 0 0 chr2L 11215131 11216733 -11794811 - DOC LINE Jockey 0 4725 3124 5 670 18597 1 0 0 chr2L 11216727 11218743 -11792801 - DOC LINE Jockey -2706 2019 4 5 670 195 167 0 0 chr2L 11219472 11219514 -11792030 + (TTG)n Simple_repeat Simple_repeat 3 44 0 5 670 189 74 0 0 chr2L 11220280 11220307 -11791237 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 670 200 143 29 0 chr2L 11220642 11220677 -11790867 + (ATG)n Simple_repeat Simple_repeat 1 36 0 5 670 245 29 0 29 chr2L 11226785 11226820 -11784724 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 5 670 256 200 15 0 chr2L 11227655 11227720 -11783824 + (ATCG)n Simple_repeat Simple_repeat 3 68 0 5 670 220 191 0 0 chr2L 11228231 11228278 -11783266 + (ATGGTG)n Simple_repeat Simple_repeat 2 48 0 5 670 231 170 0 0 chr2L 11229284 11229331 -11782213 + A-rich Low_complexity Low_complexity 1 47 0 5 670 189 74 0 0 chr2L 11232041 11232068 -11779476 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 670 189 195 0 0 chr2L 11233332 11233373 -11778171 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 5 670 204 67 0 0 chr2L 11233802 11233832 -11777712 + (GTATG)n Simple_repeat Simple_repeat 5 34 0 5 670 223 312 8 31 chr2L 11235658 11235787 -11775757 + C-rich Low_complexity Low_complexity 2 127 0 5 670 287 248 0 79 chr2L 11236347 11236461 -11775083 + ROO_I LTR Pao 641 745 -7511 5 670 249 191 0 0 chr2L 11236490 11236558 -11774986 + ROO_I LTR Pao 667 734 -7522 5 670 293 206 0 11 chr2L 11236636 11236729 -11774815 + (CAG)n Simple_repeat Simple_repeat 3 94 0 5 670 37 0 0 0 chr2L 11237309 11237346 -11774198 + AT_rich Low_complexity Low_complexity 1 37 0 5 670 315 0 0 0 chr2L 11240291 11240326 -11771218 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 670 21 0 0 0 chr2L 11242227 11242248 -11769296 + AT_rich Low_complexity Low_complexity 1 21 0 5 670 225 108 0 0 chr2L 11242873 11242910 -11768634 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 670 234 0 0 0 chr2L 11243798 11243824 -11767720 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 670 192 125 0 0 chr2L 11245758 11245790 -11765754 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 670 261 239 15 0 chr2L 11246425 11246492 -11765052 + (TGGA)n Simple_repeat Simple_repeat 3 70 0 5 670 247 297 0 0 chr2L 11247359 11247433 -11764111 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 670 221 169 17 0 chr2L 11249772 11249831 -11761713 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 670 24 53 0 0 chr2L 11254962 11255000 -11756544 + AT_rich Low_complexity Low_complexity 1 38 0 5 670 207 217 0 0 chr2L 11255652 11255712 -11755832 + (CCA)n Simple_repeat Simple_repeat 1 60 0 5 670 221 146 0 20 chr2L 11255825 11255874 -11755670 + (CAG)n Simple_repeat Simple_repeat 3 50 0 5 670 289 160 40 0 chr2L 11255988 11256063 -11755481 + ROO_I LTR Pao 649 726 -7530 5 670 227 239 0 0 chr2L 11258551 11258597 -11752947 + (CGG)n Simple_repeat Simple_repeat 1 46 0 5 670 180 0 0 0 chr2L 11259637 11259657 -11751887 + (CTA)n Simple_repeat Simple_repeat 3 22 0 5 670 230 221 14 14 chr2L 11259659 11259728 -11751816 + (TA)n Simple_repeat Simple_repeat 1 69 0 5 670 21 0 0 0 chr2L 11260781 11260802 -11750742 + AT_rich Low_complexity Low_complexity 1 21 0 5 671 189 0 0 0 chr2L 11272290 11272311 -11739233 + (TGAG)n Simple_repeat Simple_repeat 3 23 0 5 671 23 0 0 0 chr2L 11279988 11280011 -11731533 + AT_rich Low_complexity Low_complexity 1 23 0 5 671 21 57 0 0 chr2L 11286223 11286258 -11725286 + AT_rich Low_complexity Low_complexity 1 35 0 5 671 189 213 0 0 chr2L 11287542 11287589 -11723955 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 671 23 33 0 0 chr2L 11288318 11288348 -11723196 + AT_rich Low_complexity Low_complexity 1 30 0 5 671 27 0 0 0 chr2L 11289236 11289263 -11722281 + AT_rich Low_complexity Low_complexity 1 27 0 5 671 22 0 0 0 chr2L 11289280 11289302 -11722242 + AT_rich Low_complexity Low_complexity 1 22 0 5 671 29 78 0 0 chr2L 11290423 11290487 -11721057 + AT_rich Low_complexity Low_complexity 1 64 0 5 671 21 36 0 0 chr2L 11292608 11292636 -11718908 + AT_rich Low_complexity Low_complexity 1 28 0 5 671 195 100 0 0 chr2L 11292962 11292992 -11718552 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 671 21 36 0 0 chr2L 11298083 11298111 -11713433 + AT_rich Low_complexity Low_complexity 1 28 0 5 671 271 77 26 0 chr2L 11300406 11300445 -11711099 - PROTOP_B DNA P -608 545 506 5 671 31 82 0 0 chr2L 11303268 11303341 -11708203 + AT_rich Low_complexity Low_complexity 1 73 0 5 671 30 27 0 0 chr2L 11307177 11307214 -11704330 + AT_rich Low_complexity Low_complexity 1 37 0 5 671 26 74 0 0 chr2L 11307313 11307367 -11704177 + AT_rich Low_complexity Low_complexity 1 54 0 5 671 34 24 0 0 chr2L 11307552 11307593 -11703951 + AT_rich Low_complexity Low_complexity 1 41 0 5 671 224 202 12 25 chr2L 11314707 11314788 -11696756 + T-rich Low_complexity Low_complexity 4 83 0 5 671 21599 6 0 1 chr2L 11315293 11317659 -11693885 + G2_DM LINE Jockey 740 3102 0 5 671 219 88 0 0 chr2L 11318862 11318896 -11692648 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 671 23 0 0 0 chr2L 11321009 11321032 -11690512 + AT_rich Low_complexity Low_complexity 1 23 0 5 671 285 75 0 0 chr2L 11321156 11321196 -11690348 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 5 671 234 118 0 0 chr2L 11321941 11321975 -11689569 - TRANSIB2 DNA Transib -279 2565 2532 5 671 31 58 0 0 chr2L 11322283 11322335 -11689209 + AT_rich Low_complexity Low_complexity 1 52 0 5 671 21 57 0 0 chr2L 11332626 11332661 -11678883 + AT_rich Low_complexity Low_complexity 1 35 0 5 671 227 196 0 0 chr2L 11333695 11333746 -11677798 + (CGAAT)n Simple_repeat Simple_repeat 5 55 0 5 671 26 64 0 0 chr2L 11341156 11341203 -11670341 + AT_rich Low_complexity Low_complexity 1 47 0 5 671 23 33 0 0 chr2L 11343170 11343200 -11668344 + AT_rich Low_complexity Low_complexity 1 30 0 5 671 24 91 0 0 chr2L 11346072 11346138 -11665406 + AT_rich Low_complexity Low_complexity 1 66 0 5 671 245 232 14 14 chr2L 11347315 11347385 -11664159 + T-rich Low_complexity Low_complexity 3 72 0 5 671 23 0 0 0 chr2L 11348781 11348804 -11662740 + AT_rich Low_complexity Low_complexity 1 23 0 5 671 25 0 0 0 chr2L 11350599 11350624 -11660920 + AT_rich Low_complexity Low_complexity 1 25 0 5 671 31 0 0 0 chr2L 11351394 11351425 -11660119 + AT_rich Low_complexity Low_complexity 1 31 0 5 671 33 0 0 0 chr2L 11351792 11351825 -11659719 + AT_rich Low_complexity Low_complexity 1 33 0 5 671 195 42 0 0 chr2L 11352309 11352333 -11659211 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 671 26 0 0 0 chr2L 11354564 11354590 -11656954 + AT_rich Low_complexity Low_complexity 1 26 0 5 671 239 175 0 17 chr2L 11357788 11357846 -11653698 + (CGAAT)n Simple_repeat Simple_repeat 3 59 0 5 671 23 33 0 0 chr2L 11358036 11358066 -11653478 + AT_rich Low_complexity Low_complexity 1 30 0 5 671 249 98 0 0 chr2L 11358977 11359018 -11652526 + (CAG)n Simple_repeat Simple_repeat 2 42 0 5 671 213 39 0 0 chr2L 11360858 11360884 -11650660 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 671 34 42 0 0 chr2L 11361460 11361508 -11650036 + AT_rich Low_complexity Low_complexity 1 48 0 5 671 222 128 0 0 chr2L 11362695 11362734 -11648810 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 671 258 81 0 0 chr2L 11363170 11363207 -11648337 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 671 24 32 0 0 chr2L 11366154 11366185 -11645359 + AT_rich Low_complexity Low_complexity 1 31 0 5 671 186 143 0 0 chr2L 11368662 11368697 -11642847 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 5 671 24 32 0 0 chr2L 11369014 11369045 -11642499 + AT_rich Low_complexity Low_complexity 1 31 0 5 671 21 0 0 0 chr2L 11375428 11375449 -11636095 + AT_rich Low_complexity Low_complexity 1 21 0 5 671 24 32 0 0 chr2L 11377658 11377689 -11633855 + AT_rich Low_complexity Low_complexity 1 31 0 5 671 302 45 23 0 chr2L 11379190 11379234 -11632310 + (CAG)n Simple_repeat Simple_repeat 3 47 0 5 671 222 218 18 0 chr2L 11379373 11379428 -11632116 + (CAG)n Simple_repeat Simple_repeat 1 56 0 5 671 21 0 0 0 chr2L 11380767 11380788 -11630756 + AT_rich Low_complexity Low_complexity 1 21 0 5 671 34 42 0 0 chr2L 11381820 11381868 -11629676 + AT_rich Low_complexity Low_complexity 1 48 0 5 671 24 32 0 0 chr2L 11381908 11381939 -11629605 + AT_rich Low_complexity Low_complexity 1 31 0 5 671 258 81 0 0 chr2L 11382650 11382687 -11628857 + (ACTCG)n Simple_repeat Simple_repeat 1 37 0 5 671 202 209 0 0 chr2L 11385450 11385493 -11626051 + (CCA)n Simple_repeat Simple_repeat 2 44 0 5 671 22 0 0 0 chr2L 11387888 11387910 -11623634 + AT_rich Low_complexity Low_complexity 1 22 0 5 671 230 227 0 0 chr2L 11388493 11388537 -11623007 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 671 189 74 0 0 chr2L 11391314 11391341 -11620203 + (GTTTG)n Simple_repeat Simple_repeat 1 27 0 5 671 28 71 0 0 chr2L 11392477 11392533 -11619011 + AT_rich Low_complexity Low_complexity 1 56 0 5 671 21 0 0 0 chr2L 11393463 11393484 -11618060 + AT_rich Low_complexity Low_complexity 1 21 0 5 671 180 228 0 0 chr2L 11397012 11397069 -11614475 + (TCTCTG)n Simple_repeat Simple_repeat 1 57 0 5 671 26 0 0 0 chr2L 11397311 11397337 -11614207 + AT_rich Low_complexity Low_complexity 1 26 0 5 671 27 49 0 0 chr2L 11397782 11397823 -11613721 + AT_rich Low_complexity Low_complexity 1 41 0 5 672 22 88 0 0 chr2L 11404802 11404859 -11606685 + AT_rich Low_complexity Low_complexity 1 57 0 5 672 189 0 0 0 chr2L 11405344 11405365 -11606179 + (CAA)n Simple_repeat Simple_repeat 1 21 0 5 672 332 119 0 17 chr2L 11405517 11405577 -11605967 + (CAG)n Simple_repeat Simple_repeat 1 59 0 5 672 23 0 0 0 chr2L 11406958 11406981 -11604563 + AT_rich Low_complexity Low_complexity 1 23 0 5 672 26 64 0 0 chr2L 11407821 11407868 -11603676 + AT_rich Low_complexity Low_complexity 1 47 0 5 672 216 122 0 0 chr2L 11408165 11408206 -11603338 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 672 21 0 0 0 chr2L 11409805 11409826 -11601718 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 21 82 0 0 chr2L 11416004 11416053 -11595491 + AT_rich Low_complexity Low_complexity 1 49 0 5 672 252 222 0 0 chr2L 11417909 11417981 -11593563 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 5 672 29 70 0 0 chr2L 11421028 11421085 -11590459 + AT_rich Low_complexity Low_complexity 1 57 0 5 672 261 83 0 0 chr2L 11422764 11422800 -11588744 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 672 210 91 0 0 chr2L 11423484 11423517 -11588027 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 672 30 45 0 0 chr2L 11424157 11424201 -11587343 + AT_rich Low_complexity Low_complexity 1 44 0 5 672 210 211 0 78 chr2L 11425779 11425856 -11585688 + A-rich Low_complexity Low_complexity 1 71 0 5 672 204 97 0 0 chr2L 11426950 11426981 -11584563 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 672 30 77 0 0 chr2L 11427770 11427835 -11583709 + AT_rich Low_complexity Low_complexity 1 65 0 5 672 180 111 0 0 chr2L 11428588 11428615 -11582929 + (CCAA)n Simple_repeat Simple_repeat 3 29 0 5 672 32 26 0 0 chr2L 11428939 11428978 -11582566 + AT_rich Low_complexity Low_complexity 1 39 0 5 672 24 53 0 0 chr2L 11430022 11430060 -11581484 + AT_rich Low_complexity Low_complexity 1 38 0 5 672 198 71 0 0 chr2L 11431901 11431929 -11579615 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 672 217 258 0 15 chr2L 11431932 11431999 -11579545 + (TTG)n Simple_repeat Simple_repeat 2 67 0 5 672 261 0 0 0 chr2L 11434585 11434614 -11576930 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 672 21 36 0 0 chr2L 11434812 11434840 -11576704 + AT_rich Low_complexity Low_complexity 1 28 0 5 672 22 35 0 0 chr2L 11435108 11435137 -11576407 + AT_rich Low_complexity Low_complexity 1 29 0 5 672 22 0 0 0 chr2L 11435166 11435188 -11576356 + AT_rich Low_complexity Low_complexity 1 22 0 5 672 471 230 11 33 chr2L 11436779 11436959 -11574585 + (CTG)n Simple_repeat Simple_repeat 3 178 0 5 672 189 0 0 0 chr2L 11439890 11439911 -11571633 + (TTCTCC)n Simple_repeat Simple_repeat 1 21 0 5 672 236 180 0 0 chr2L 11440094 11440144 -11571400 + (CTCTG)n Simple_repeat Simple_repeat 3 52 0 5 672 180 111 0 0 chr2L 11440736 11440763 -11570781 + (CTG)n Simple_repeat Simple_repeat 3 29 0 5 672 267 140 0 0 chr2L 11440885 11440935 -11570609 + (CTG)n Simple_repeat Simple_repeat 1 50 0 5 672 249 135 0 55 chr2L 11441074 11441129 -11570415 + ROO_I LTR Pao 653 704 -7552 5 672 22 35 0 0 chr2L 11441600 11441629 -11569915 + AT_rich Low_complexity Low_complexity 1 29 0 5 672 27 0 0 0 chr2L 11443470 11443497 -11568047 + AT_rich Low_complexity Low_complexity 1 27 0 5 672 21 0 0 0 chr2L 11443680 11443701 -11567843 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 29 28 0 0 chr2L 11448191 11448227 -11563317 + AT_rich Low_complexity Low_complexity 1 36 0 5 672 24 32 0 0 chr2L 11450088 11450119 -11561425 + AT_rich Low_complexity Low_complexity 1 31 0 5 672 25 0 0 0 chr2L 11450800 11450825 -11560719 + AT_rich Low_complexity Low_complexity 1 25 0 5 672 180 0 0 0 chr2L 11454740 11454760 -11556784 + (TGGA)n Simple_repeat Simple_repeat 3 22 0 5 672 30 0 0 0 chr2L 11455012 11455042 -11556502 + AT_rich Low_complexity Low_complexity 1 30 0 5 672 35 41 0 0 chr2L 11459238 11459287 -11552257 + AT_rich Low_complexity Low_complexity 1 49 0 5 672 24 0 0 0 chr2L 11462987 11463011 -11548533 + AT_rich Low_complexity Low_complexity 1 24 0 5 672 36 0 0 0 chr2L 11463088 11463124 -11548420 + AT_rich Low_complexity Low_complexity 1 36 0 5 672 23 0 0 0 chr2L 11463482 11463505 -11548039 + AT_rich Low_complexity Low_complexity 1 23 0 5 672 192 77 0 0 chr2L 11465518 11465544 -11546000 + (CATCG)n Simple_repeat Simple_repeat 1 26 0 5 672 27 62 0 0 chr2L 11466684 11466732 -11544812 + AT_rich Low_complexity Low_complexity 1 48 0 5 672 23 54 0 0 chr2L 11467850 11467887 -11543657 + AT_rich Low_complexity Low_complexity 1 37 0 5 672 28 48 0 0 chr2L 11470104 11470146 -11541398 + AT_rich Low_complexity Low_complexity 1 42 0 5 672 228 320 0 0 chr2L 11470417 11470520 -11541024 + T-rich Low_complexity Low_complexity 1 103 0 5 672 22 0 0 0 chr2L 11470689 11470711 -11540833 + AT_rich Low_complexity Low_complexity 1 22 0 5 672 183 80 0 0 chr2L 11474735 11474760 -11536784 + (CGAGT)n Simple_repeat Simple_repeat 2 26 0 5 672 26 30 0 0 chr2L 11475288 11475321 -11536223 + AT_rich Low_complexity Low_complexity 1 33 0 5 672 31 26 0 0 chr2L 11476911 11476949 -11534595 + AT_rich Low_complexity Low_complexity 1 38 0 5 672 21 57 0 0 chr2L 11479349 11479384 -11532160 + AT_rich Low_complexity Low_complexity 1 35 0 5 672 27 0 0 0 chr2L 11480414 11480441 -11531103 + AT_rich Low_complexity Low_complexity 1 27 0 5 672 35 0 0 0 chr2L 11482993 11483028 -11528516 + AT_rich Low_complexity Low_complexity 1 35 0 5 672 29 28 0 0 chr2L 11485875 11485911 -11525633 + AT_rich Low_complexity Low_complexity 1 36 0 5 672 21 36 0 0 chr2L 11486257 11486285 -11525259 + AT_rich Low_complexity Low_complexity 1 28 0 5 672 180 0 0 0 chr2L 11487474 11487494 -11524050 + (CTG)n Simple_repeat Simple_repeat 2 21 0 5 672 22 70 0 0 chr2L 11487877 11487920 -11523624 + AT_rich Low_complexity Low_complexity 1 43 0 5 672 276 30 0 0 chr2L 11489544 11489577 -11521967 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 672 22 0 0 0 chr2L 11490484 11490506 -11521038 + AT_rich Low_complexity Low_complexity 1 22 0 5 672 25 0 0 0 chr2L 11492349 11492374 -11519170 + AT_rich Low_complexity Low_complexity 1 25 0 5 672 24 0 0 0 chr2L 11493036 11493060 -11518484 + AT_rich Low_complexity Low_complexity 1 24 0 5 672 207 150 33 16 chr2L 11495374 11495435 -11516109 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 672 198 103 0 0 chr2L 11495589 11495618 -11515926 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 672 38 39 0 0 chr2L 11499237 11499289 -11512255 + AT_rich Low_complexity Low_complexity 1 52 0 5 672 204 183 11 68 chr2L 11500404 11500492 -11511052 + A-rich Low_complexity Low_complexity 5 87 0 5 672 23 0 0 0 chr2L 11500518 11500541 -11511003 + AT_rich Low_complexity Low_complexity 1 23 0 5 672 237 213 0 0 chr2L 11500643 11500690 -11510854 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 672 26 30 0 0 chr2L 11500881 11500914 -11510630 + AT_rich Low_complexity Low_complexity 1 33 0 5 672 212 179 0 0 chr2L 11500972 11501011 -11510533 + A-rich Low_complexity Low_complexity 1 39 0 5 672 21 0 0 0 chr2L 11501455 11501476 -11510068 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 183 170 0 0 chr2L 11501820 11501867 -11509677 + A-rich Low_complexity Low_complexity 1 47 0 5 672 24 32 0 0 chr2L 11502364 11502395 -11509149 + AT_rich Low_complexity Low_complexity 1 31 0 5 672 189 74 0 0 chr2L 11502906 11502933 -11508611 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 672 25 0 0 0 chr2L 11505483 11505508 -11506036 + AT_rich Low_complexity Low_complexity 1 25 0 5 672 27 73 0 0 chr2L 11515974 11516029 -11495515 + AT_rich Low_complexity Low_complexity 1 55 0 5 672 25 51 0 0 chr2L 11521604 11521643 -11489901 + AT_rich Low_complexity Low_complexity 1 39 0 5 672 21 0 0 0 chr2L 11522475 11522496 -11489048 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 27 29 0 0 chr2L 11523164 11523198 -11488346 + AT_rich Low_complexity Low_complexity 1 34 0 5 672 25 0 0 0 chr2L 11525862 11525887 -11485657 + AT_rich Low_complexity Low_complexity 1 25 0 5 672 36 0 0 0 chr2L 11527521 11527557 -11483987 + AT_rich Low_complexity Low_complexity 1 36 0 5 672 21 0 0 0 chr2L 11528098 11528119 -11483425 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 198 71 0 0 chr2L 11528429 11528457 -11483087 + (TTAA)n Simple_repeat Simple_repeat 2 29 0 5 673 180 111 0 0 chr2L 11534483 11534510 -11477034 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 673 231 88 0 0 chr2L 11536305 11536339 -11475205 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 673 213 274 0 0 chr2L 11537352 11537403 -11474141 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 673 210 71 0 0 chr2L 11537538 11537566 -11473978 + (CTG)n Simple_repeat Simple_repeat 3 30 0 5 673 23 68 0 0 chr2L 11537766 11537810 -11473734 + AT_rich Low_complexity Low_complexity 1 44 0 5 673 209 302 0 0 chr2L 11538164 11538217 -11473327 + C-rich Low_complexity Low_complexity 3 55 0 5 673 180 0 0 0 chr2L 11538262 11538282 -11473262 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 673 24 91 0 0 chr2L 11539371 11539437 -11472107 + AT_rich Low_complexity Low_complexity 1 66 0 5 673 4737 0 0 0 chr2L 11540637 11541143 -11470401 - TABOR_LTR LTR Gypsy 0 506 1 5 673 57266 0 0 0 chr2L 11541141 11547476 -11464068 - TABOR_I LTR Gypsy 0 6336 1 5 673 4737 0 0 0 chr2L 11547476 11547982 -11463562 - TABOR_LTR LTR Gypsy 0 506 1 5 673 261 57 0 0 chr2L 11548356 11548391 -11463153 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 673 25 0 0 0 chr2L 11552663 11552688 -11458856 + AT_rich Low_complexity Low_complexity 1 25 0 5 673 308 210 0 0 chr2L 11553451 11553513 -11458031 + DNAREP1_DM LINE Penelope 1 62 -532 5 673 216 103 17 33 chr2L 11553544 11553604 -11457940 + A-rich Low_complexity Low_complexity 2 60 0 5 673 23 0 0 0 chr2L 11553692 11553715 -11457829 + AT_rich Low_complexity Low_complexity 1 23 0 5 673 21 0 0 0 chr2L 11554926 11554947 -11456597 + AT_rich Low_complexity Low_complexity 1 21 0 5 673 24 96 0 0 chr2L 11555540 11555613 -11455931 + AT_rich Low_complexity Low_complexity 1 73 0 5 673 198 0 0 0 chr2L 11556193 11556215 -11455329 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 673 21 0 0 0 chr2L 11557270 11557291 -11454253 + AT_rich Low_complexity Low_complexity 1 21 0 5 673 32 43 0 0 chr2L 11561077 11561123 -11450421 + AT_rich Low_complexity Low_complexity 1 46 0 5 673 34 42 0 0 chr2L 11561144 11561192 -11450352 + AT_rich Low_complexity Low_complexity 1 48 0 5 673 261 212 138 0 chr2L 11562558 11562638 -11448906 + DNAREP1_DM LINE Penelope 1 91 -503 5 673 180 0 0 0 chr2L 11563393 11563413 -11448131 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 673 2297 0 0 0 chr2L 11563691 11563967 -11447577 - Copia_LTR LTR Copia 0 276 1 5 673 39288 0 0 0 chr2L 11563967 11568561 -11442983 - Copia_I LTR Copia 0 4593 1 5 673 2297 0 0 0 chr2L 11568561 11568837 -11442707 - Copia_LTR LTR Copia 0 276 1 5 673 200 184 0 0 chr2L 11569353 11569391 -11442153 + (CTCCG)n Simple_repeat Simple_repeat 4 41 0 5 673 21 0 0 0 chr2L 11574106 11574127 -11437417 + AT_rich Low_complexity Low_complexity 1 21 0 5 673 249 207 0 17 chr2L 11574269 11574328 -11437216 + GA-rich Low_complexity Low_complexity 3 60 0 5 673 189 0 0 0 chr2L 11575295 11575316 -11436228 + (TAA)n Simple_repeat Simple_repeat 1 21 0 5 673 27 29 0 0 chr2L 11576223 11576257 -11435287 + AT_rich Low_complexity Low_complexity 1 34 0 5 673 189 0 0 0 chr2L 11576914 11576935 -11434609 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 673 25 0 0 0 chr2L 11578417 11578442 -11433102 + AT_rich Low_complexity Low_complexity 1 25 0 5 673 22 0 0 0 chr2L 11579546 11579568 -11431976 + AT_rich Low_complexity Low_complexity 1 22 0 5 673 28 0 0 0 chr2L 11581477 11581505 -11430039 + AT_rich Low_complexity Low_complexity 1 28 0 5 673 33 80 0 0 chr2L 11584421 11584496 -11427048 + AT_rich Low_complexity Low_complexity 1 75 0 5 673 186 43 0 0 chr2L 11584838 11584861 -11426683 + (ATG)n Simple_repeat Simple_repeat 1 23 0 5 673 22 35 0 0 chr2L 11587937 11587966 -11423578 + AT_rich Low_complexity Low_complexity 1 29 0 5 673 21 36 0 0 chr2L 11590938 11590966 -11420578 + AT_rich Low_complexity Low_complexity 1 28 0 5 673 30 27 0 0 chr2L 11591070 11591107 -11420437 + AT_rich Low_complexity Low_complexity 1 37 0 5 673 194 128 26 0 chr2L 11595458 11595497 -11416047 + (CATA)n Simple_repeat Simple_repeat 4 43 0 5 673 23 0 0 0 chr2L 11601027 11601050 -11410494 + AT_rich Low_complexity Low_complexity 1 23 0 5 673 45 0 0 0 chr2L 11601858 11601903 -11409641 + AT_rich Low_complexity Low_complexity 1 45 0 5 673 287 312 0 0 chr2L 11602393 11602489 -11409055 + (TCTCTG)n Simple_repeat Simple_repeat 3 98 0 5 673 212 239 0 0 chr2L 11602575 11602621 -11408923 + (TGGG)n Simple_repeat Simple_repeat 2 47 0 5 673 208 143 0 0 chr2L 11604621 11604656 -11406888 + (ATTTG)n Simple_repeat Simple_repeat 1 35 0 5 673 29 94 0 0 chr2L 11605634 11605719 -11405825 + AT_rich Low_complexity Low_complexity 1 85 0 5 673 25 0 0 0 chr2L 11610634 11610659 -11400885 + AT_rich Low_complexity Low_complexity 1 25 0 5 673 13039 2 0 1 chr2L 11614107 11615544 -11396000 - M4DM DNA Transib 0 1435 1 5 673 22 56 0 0 chr2L 11616963 11616999 -11394545 + AT_rich Low_complexity Low_complexity 1 36 0 5 673 22 0 0 0 chr2L 11617196 11617218 -11394326 + AT_rich Low_complexity Low_complexity 1 22 0 5 673 21 0 0 0 chr2L 11618960 11618981 -11392563 + AT_rich Low_complexity Low_complexity 1 21 0 5 673 25 0 0 0 chr2L 11621069 11621094 -11390450 + AT_rich Low_complexity Low_complexity 1 25 0 5 673 229 182 0 0 chr2L 11623785 11623829 -11387715 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 673 317 176 0 42 chr2L 11624041 11624112 -11387432 + ROO_I LTR Pao 677 744 -7512 5 673 21 0 0 0 chr2L 11626480 11626501 -11385043 + AT_rich Low_complexity Low_complexity 1 21 0 5 673 201 176 0 0 chr2L 11631440 11631474 -11380070 + A-rich Low_complexity Low_complexity 1 34 0 5 673 192 163 0 0 chr2L 11632437 11632480 -11379064 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 673 31 76 0 0 chr2L 11633764 11633830 -11377714 + AT_rich Low_complexity Low_complexity 1 66 0 5 673 25 0 0 0 chr2L 11638394 11638419 -11373125 + AT_rich Low_complexity Low_complexity 1 25 0 5 673 26 0 0 0 chr2L 11640193 11640219 -11371325 + AT_rich Low_complexity Low_complexity 1 26 0 5 673 210 246 0 0 chr2L 11642557 11642618 -11368926 + (CAAA)n Simple_repeat Simple_repeat 1 61 0 5 673 26 30 0 0 chr2L 11644455 11644488 -11367056 + AT_rich Low_complexity Low_complexity 1 33 0 5 673 239 210 32 0 chr2L 11644845 11644907 -11366637 + (TTG)n Simple_repeat Simple_repeat 3 66 0 5 673 22 56 0 0 chr2L 11646459 11646495 -11365049 + AT_rich Low_complexity Low_complexity 1 36 0 5 673 23 0 0 0 chr2L 11650067 11650090 -11361454 + AT_rich Low_complexity Low_complexity 1 23 0 5 673 189 0 0 0 chr2L 11650294 11650315 -11361229 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 673 213 132 0 26 chr2L 11650368 11650407 -11361137 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 673 21 0 0 0 chr2L 11656550 11656571 -11354973 + AT_rich Low_complexity Low_complexity 1 21 0 5 673 299 244 0 0 chr2L 11658694 11658780 -11352764 - ROO_I LTR Pao -7524 732 647 5 673 29 60 0 0 chr2L 11659859 11659909 -11351635 + AT_rich Low_complexity Low_complexity 1 50 0 5 673 22 0 0 0 chr2L 11660401 11660423 -11351121 + AT_rich Low_complexity Low_complexity 1 22 0 5 674 26 30 0 0 chr2L 11668614 11668647 -11342897 + AT_rich Low_complexity Low_complexity 1 33 0 5 674 219 88 0 0 chr2L 11669487 11669521 -11342023 + (CAG)n Simple_repeat Simple_repeat 3 36 0 5 674 21 0 0 0 chr2L 11674811 11674832 -11336712 + AT_rich Low_complexity Low_complexity 1 21 0 5 674 27 49 0 0 chr2L 11674877 11674918 -11336626 + AT_rich Low_complexity Low_complexity 1 41 0 5 674 24 32 0 0 chr2L 11674961 11674992 -11336552 + AT_rich Low_complexity Low_complexity 1 31 0 5 674 241 157 56 14 chr2L 11676338 11676409 -11335135 + (TTTA)n Simple_repeat Simple_repeat 4 77 0 5 674 26 0 0 0 chr2L 11677645 11677671 -11333873 + AT_rich Low_complexity Low_complexity 1 26 0 5 674 198 0 0 0 chr2L 11678171 11678193 -11333351 + (TTTTTA)n Simple_repeat Simple_repeat 1 22 0 5 674 215 214 0 0 chr2L 11680132 11680174 -11331370 + (CTG)n Simple_repeat Simple_repeat 1 42 0 5 674 215 203 0 17 chr2L 11680356 11680416 -11331128 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 674 31 58 0 0 chr2L 11681776 11681828 -11329716 + AT_rich Low_complexity Low_complexity 1 52 0 5 674 27 49 0 0 chr2L 11681854 11681895 -11329649 + AT_rich Low_complexity Low_complexity 1 41 0 5 674 24 32 0 0 chr2L 11684115 11684146 -11327398 + AT_rich Low_complexity Low_complexity 1 31 0 5 674 210 150 0 0 chr2L 11685693 11685733 -11325811 + (T)n Simple_repeat Simple_repeat 1 40 0 5 674 22 0 0 0 chr2L 11687551 11687573 -11323971 + AT_rich Low_complexity Low_complexity 1 22 0 5 674 21 0 0 0 chr2L 11689142 11689163 -11322381 + AT_rich Low_complexity Low_complexity 1 21 0 5 674 21 0 0 0 chr2L 11697198 11697219 -11314325 + AT_rich Low_complexity Low_complexity 1 21 0 5 674 222 91 0 0 chr2L 11698322 11698355 -11313189 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 674 222 118 0 0 chr2L 11699009 11699043 -11312501 + (ATG)n Simple_repeat Simple_repeat 1 34 0 5 674 26 0 0 0 chr2L 11699979 11700005 -11311539 + AT_rich Low_complexity Low_complexity 1 26 0 5 674 22 56 0 0 chr2L 11702623 11702659 -11308885 + AT_rich Low_complexity Low_complexity 1 36 0 5 674 208 53 53 0 chr2L 11703995 11704033 -11307511 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 674 183 100 0 0 chr2L 11707962 11707992 -11303552 + (T)n Simple_repeat Simple_repeat 1 30 0 5 674 23 97 0 0 chr2L 11708380 11708452 -11303092 + AT_rich Low_complexity Low_complexity 1 72 0 5 674 27 49 0 0 chr2L 11708967 11709008 -11302536 + AT_rich Low_complexity Low_complexity 1 41 0 5 674 286 191 0 0 chr2L 11713011 11713058 -11298486 + (CCCGAA)n Simple_repeat Simple_repeat 3 49 0 5 674 3528 0 0 0 chr2L 11713561 11713960 -11297584 + BLOOD_LTR LTR Gypsy 1 399 0 5 674 56540 0 0 0 chr2L 11713960 11720573 -11290971 + BLOOD_I LTR Gypsy 1 6613 0 5 674 3528 0 0 0 chr2L 11720573 11720972 -11290572 + BLOOD_LTR LTR Gypsy 1 399 0 5 674 25 0 0 0 chr2L 11728555 11728580 -11282964 + AT_rich Low_complexity Low_complexity 1 25 0 5 674 189 0 0 0 chr2L 11733288 11733309 -11278235 + (T)n Simple_repeat Simple_repeat 1 21 0 5 674 21 36 0 0 chr2L 11734079 11734107 -11277437 + AT_rich Low_complexity Low_complexity 1 28 0 5 674 23 0 0 0 chr2L 11736655 11736678 -11274866 + AT_rich Low_complexity Low_complexity 1 23 0 5 674 22 0 0 0 chr2L 11736751 11736773 -11274771 + AT_rich Low_complexity Low_complexity 1 22 0 5 674 231 167 0 0 chr2L 11737153 11737195 -11274349 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 674 24 53 0 0 chr2L 11743780 11743818 -11267726 + AT_rich Low_complexity Low_complexity 1 38 0 5 674 22 0 0 0 chr2L 11745608 11745630 -11265914 + AT_rich Low_complexity Low_complexity 1 22 0 5 674 234 105 0 0 chr2L 11747066 11747104 -11264440 + (CCGAA)n Simple_repeat Simple_repeat 4 41 0 5 674 279 79 0 0 chr2L 11747437 11747475 -11264069 + (CAGTT)n Simple_repeat Simple_repeat 1 38 0 5 674 42 0 0 0 chr2L 11747727 11747769 -11263775 + AT_rich Low_complexity Low_complexity 1 42 0 5 674 225 197 0 0 chr2L 11749053 11749114 -11262430 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 674 22 0 0 0 chr2L 11754795 11754817 -11256727 + AT_rich Low_complexity Low_complexity 1 22 0 5 674 192 40 0 0 chr2L 11755282 11755307 -11256237 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 674 221 245 0 0 chr2L 11756074 11756123 -11255421 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 674 23 68 0 0 chr2L 11756622 11756666 -11254878 + AT_rich Low_complexity Low_complexity 1 44 0 5 674 202 281 0 0 chr2L 11756752 11756809 -11254735 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 674 183 80 0 0 chr2L 11758859 11758884 -11252660 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 674 225 0 0 0 chr2L 11759012 11759037 -11252507 + (TTA)n Simple_repeat Simple_repeat 1 25 0 5 674 31 26 0 0 chr2L 11760752 11760790 -11250754 + AT_rich Low_complexity Low_complexity 1 38 0 5 674 21 0 0 0 chr2L 11761777 11761798 -11249746 + AT_rich Low_complexity Low_complexity 1 21 0 5 674 24 0 0 0 chr2L 11763755 11763779 -11247765 + AT_rich Low_complexity Low_complexity 1 24 0 5 674 23 33 0 0 chr2L 11764406 11764436 -11247108 + AT_rich Low_complexity Low_complexity 1 30 0 5 674 205 171 0 0 chr2L 11766863 11766898 -11244646 + (TTTCG)n Simple_repeat Simple_repeat 4 38 0 5 674 255 244 0 0 chr2L 11767174 11767252 -11244292 + (CGGA)n Simple_repeat Simple_repeat 1 78 0 5 674 22 70 0 0 chr2L 11770073 11770116 -11241428 + AT_rich Low_complexity Low_complexity 1 43 0 5 674 202 317 0 0 chr2L 11771298 11771358 -11240186 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 674 273 75 0 0 chr2L 11771789 11771829 -11239715 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 674 40 59 0 0 chr2L 11772783 11772851 -11238693 + AT_rich Low_complexity Low_complexity 1 68 0 5 674 195 42 0 0 chr2L 11774649 11774673 -11236871 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 5 674 247 274 0 0 chr2L 11775123 11775196 -11236348 + T-rich Low_complexity Low_complexity 1 73 0 5 674 27 62 0 0 chr2L 11777710 11777758 -11233786 + AT_rich Low_complexity Low_complexity 1 48 0 5 674 189 147 0 0 chr2L 11778935 11778969 -11232575 + (GAAA)n Simple_repeat Simple_repeat 1 34 0 5 674 35 83 0 0 chr2L 11780599 11780683 -11230861 + AT_rich Low_complexity Low_complexity 1 84 0 5 674 21 0 0 0 chr2L 11781268 11781289 -11230255 + AT_rich Low_complexity Low_complexity 1 21 0 5 674 186 43 0 0 chr2L 11781521 11781544 -11230000 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 674 21 0 0 0 chr2L 11782509 11782530 -11229014 + AT_rich Low_complexity Low_complexity 1 21 0 5 674 218 299 0 13 chr2L 11784897 11784975 -11226569 + (CA)n Simple_repeat Simple_repeat 1 77 0 5 674 24 32 0 0 chr2L 11786461 11786492 -11225052 + AT_rich Low_complexity Low_complexity 1 31 0 5 674 222 231 0 0 chr2L 11787143 11787195 -11224349 + T-rich Low_complexity Low_complexity 1 52 0 5 674 34 72 0 0 chr2L 11787477 11787546 -11223998 + AT_rich Low_complexity Low_complexity 1 69 0 5 674 27 29 0 0 chr2L 11788316 11788350 -11223194 + AT_rich Low_complexity Low_complexity 1 34 0 5 674 35 24 0 0 chr2L 11791042 11791084 -11220460 + AT_rich Low_complexity Low_complexity 1 42 0 5 674 183 80 0 0 chr2L 11793025 11793050 -11218494 + (TCC)n Simple_repeat Simple_repeat 2 26 0 5 675 329 198 29 29 chr2L 11797269 11797373 -11214171 - ROO_I LTR Pao -7530 726 623 5 675 231 173 172 69 chr2L 11797371 11797458 -11214086 - TART_B1 LINE telomeric -10432 222 127 5 675 277 200 30 91 chr2L 11797387 11797486 -11214058 - ROO_I LTR Pao -7525 731 639 5 675 284 177 30 30 chr2L 11797499 11797598 -11213946 + (CTG)n Simple_repeat Simple_repeat 1 99 0 5 675 194 143 20 0 chr2L 11801143 11801192 -11210352 + (CTTTG)n Simple_repeat Simple_repeat 1 50 0 5 675 185 117 16 48 chr2L 11802046 11802109 -11209435 + (TTGG)n Simple_repeat Simple_repeat 3 63 0 5 675 266 348 0 0 chr2L 11803021 11803136 -11208408 + (CCG)n Simple_repeat Simple_repeat 3 117 0 5 675 281 209 34 17 chr2L 11803501 11803618 -11207926 + (TTG)n Simple_repeat Simple_repeat 1 119 0 5 675 265 103 26 0 chr2L 11805122 11805161 -11206383 + Stalker2_LTR LTR Gypsy 227 266 -158 5 675 270 56 0 0 chr2L 11807153 11807189 -11204355 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 675 227 254 0 0 chr2L 11807708 11807771 -11203773 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 675 26 0 0 0 chr2L 11809572 11809598 -11201946 + AT_rich Low_complexity Low_complexity 1 26 0 5 675 243 103 0 0 chr2L 11811996 11812035 -11199509 + (CCG)n Simple_repeat Simple_repeat 2 40 0 5 675 21 36 0 0 chr2L 11813895 11813923 -11197621 + AT_rich Low_complexity Low_complexity 1 28 0 5 675 21 0 0 0 chr2L 11814575 11814596 -11196948 + AT_rich Low_complexity Low_complexity 1 21 0 5 675 197 65 0 31 chr2L 11814995 11815027 -11196517 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 675 201 186 0 23 chr2L 11819421 11819465 -11192079 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 675 25 31 0 0 chr2L 11819832 11819864 -11191680 + AT_rich Low_complexity Low_complexity 1 32 0 5 675 180 0 0 0 chr2L 11820820 11820840 -11190704 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 675 26 30 0 0 chr2L 11825873 11825906 -11185638 + AT_rich Low_complexity Low_complexity 1 33 0 5 675 22 0 0 0 chr2L 11833456 11833478 -11178066 + AT_rich Low_complexity Low_complexity 1 22 0 5 675 26 0 0 67 chr2L 11833545 11833590 -11177954 + AT_rich Low_complexity Low_complexity 1 42 0 5 675 215 143 90 13 chr2L 11834403 11834481 -11177063 + (TAAA)n Simple_repeat Simple_repeat 3 86 0 5 675 28 29 0 0 chr2L 11835892 11835927 -11175617 + AT_rich Low_complexity Low_complexity 1 35 0 5 675 342 194 0 0 chr2L 11837037 11837104 -11174440 - DNAREP1_DM LINE Penelope -513 81 15 5 675 21 36 0 0 chr2L 11839215 11839243 -11172301 + AT_rich Low_complexity Low_complexity 1 28 0 5 675 22 0 0 0 chr2L 11840306 11840328 -11171216 + AT_rich Low_complexity Low_complexity 1 22 0 5 675 24 32 0 0 chr2L 11840978 11841009 -11170535 + AT_rich Low_complexity Low_complexity 1 31 0 5 675 24 0 0 0 chr2L 11844924 11844948 -11166596 + AT_rich Low_complexity Low_complexity 1 24 0 5 675 45 34 0 0 chr2L 11849792 11849851 -11161693 + AT_rich Low_complexity Low_complexity 1 59 0 5 675 24 0 0 0 chr2L 11851779 11851803 -11159741 + AT_rich Low_complexity Low_complexity 1 24 0 5 675 180 111 0 0 chr2L 11856882 11856909 -11154635 + (CATA)n Simple_repeat Simple_repeat 4 30 0 5 675 26 0 0 0 chr2L 11857411 11857437 -11154107 + AT_rich Low_complexity Low_complexity 1 26 0 5 675 24 0 0 0 chr2L 11859744 11859768 -11151776 + AT_rich Low_complexity Low_complexity 1 24 0 5 675 23 33 0 0 chr2L 11860346 11860376 -11151168 + AT_rich Low_complexity Low_complexity 1 30 0 5 675 186 103 0 0 chr2L 11863265 11863294 -11148250 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 675 32 75 0 0 chr2L 11864013 11864080 -11147464 + AT_rich Low_complexity Low_complexity 1 67 0 5 675 198 0 0 0 chr2L 11869220 11869242 -11142302 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 675 183 42 0 0 chr2L 11871051 11871075 -11140469 + (CATTT)n Simple_repeat Simple_repeat 2 25 0 5 675 21 57 0 0 chr2L 11872326 11872361 -11139183 + AT_rich Low_complexity Low_complexity 1 35 0 5 675 27 29 0 0 chr2L 11874221 11874255 -11137289 + AT_rich Low_complexity Low_complexity 1 34 0 5 675 25 75 0 0 chr2L 11874867 11874920 -11136624 + AT_rich Low_complexity Low_complexity 1 53 0 5 675 205 302 0 0 chr2L 11875239 11875302 -11136242 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 675 22 0 0 0 chr2L 11878190 11878212 -11133332 + AT_rich Low_complexity Low_complexity 1 22 0 5 675 25 0 0 0 chr2L 11878341 11878366 -11133178 + AT_rich Low_complexity Low_complexity 1 25 0 5 675 30 45 0 0 chr2L 11878922 11878966 -11132578 + AT_rich Low_complexity Low_complexity 1 44 0 5 675 180 125 0 0 chr2L 11879610 11879642 -11131902 + (TGG)n Simple_repeat Simple_repeat 1 32 0 5 675 202 231 0 0 chr2L 11881495 11881534 -11130010 + (CATTT)n Simple_repeat Simple_repeat 5 43 0 5 675 21 0 0 0 chr2L 11885298 11885319 -11126225 + AT_rich Low_complexity Low_complexity 1 21 0 5 675 21 0 0 0 chr2L 11887512 11887533 -11124011 + AT_rich Low_complexity Low_complexity 1 21 0 5 675 201 94 0 0 chr2L 11895022 11895054 -11116490 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 675 24863 1 0 0 chr2L 11897167 11900010 -11111534 + BS2 LINE Jockey 1879 4721 0 5 675 198 0 0 0 chr2L 11900016 11900038 -11111506 + (A)n Simple_repeat Simple_repeat 1 22 0 5 675 279 54 0 0 chr2L 11900636 11900673 -11110871 + (ATG)n Simple_repeat Simple_repeat 2 38 0 5 675 22 35 0 0 chr2L 11901779 11901808 -11109736 + AT_rich Low_complexity Low_complexity 1 29 0 5 675 201 159 0 0 chr2L 11901961 11902005 -11109539 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 675 27 29 0 0 chr2L 11903918 11903952 -11107592 + AT_rich Low_complexity Low_complexity 1 34 0 5 675 27 29 0 0 chr2L 11904033 11904067 -11107477 + AT_rich Low_complexity Low_complexity 1 34 0 5 675 209 208 0 0 chr2L 11904556 11904604 -11106940 + A-rich Low_complexity Low_complexity 1 48 0 5 675 22 0 0 0 chr2L 11905407 11905429 -11106115 + AT_rich Low_complexity Low_complexity 1 22 0 5 675 32 26 0 0 chr2L 11906885 11906924 -11104620 + AT_rich Low_complexity Low_complexity 1 39 0 5 675 21 0 0 0 chr2L 11911238 11911259 -11100285 + AT_rich Low_complexity Low_complexity 1 21 0 5 675 25 31 0 0 chr2L 11911379 11911411 -11100133 + AT_rich Low_complexity Low_complexity 1 32 0 5 675 33 56 0 0 chr2L 11912717 11912771 -11098773 + AT_rich Low_complexity Low_complexity 1 54 0 5 675 27 81 0 0 chr2L 11915163 11915225 -11096319 + AT_rich Low_complexity Low_complexity 1 62 0 5 675 228 86 0 0 chr2L 11915438 11915473 -11096071 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 675 189 107 0 0 chr2L 11916528 11916556 -11094988 + (CAG)n Simple_repeat Simple_repeat 2 29 0 5 675 201 132 0 0 chr2L 11918706 11918744 -11092800 + (A)n Simple_repeat Simple_repeat 1 38 0 5 675 21 36 0 0 chr2L 11921514 11921542 -11090002 + AT_rich Low_complexity Low_complexity 1 28 0 5 675 36 0 0 0 chr2L 11922462 11922498 -11089046 + AT_rich Low_complexity Low_complexity 1 36 0 5 675 195 162 0 0 chr2L 11925386 11925423 -11086121 + (GCTTG)n Simple_repeat Simple_repeat 2 38 0 5 676 23 68 0 0 chr2L 11928000 11928044 -11083500 + AT_rich Low_complexity Low_complexity 1 44 0 5 676 198 71 0 0 chr2L 11928422 11928450 -11083094 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 676 21 36 0 0 chr2L 11931674 11931702 -11079842 + AT_rich Low_complexity Low_complexity 1 28 0 5 676 40 59 0 0 chr2L 11933489 11933557 -11077987 + AT_rich Low_complexity Low_complexity 1 68 0 5 676 231 152 22 0 chr2L 11937819 11937865 -11073679 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 676 22 0 0 0 chr2L 11940342 11940364 -11071180 + AT_rich Low_complexity Low_complexity 1 22 0 5 676 29 47 0 0 chr2L 11940683 11940726 -11070818 + AT_rich Low_complexity Low_complexity 1 43 0 5 676 198 103 0 0 chr2L 11940962 11940991 -11070553 + (AAATG)n Simple_repeat Simple_repeat 2 30 0 5 676 256 136 34 90 chr2L 11943246 11943335 -11068209 + DNAREP1_DM LINE Penelope 218 301 -293 5 676 281 114 0 0 chr2L 11943312 11943356 -11068188 + DNAREP1_DM LINE Penelope 194 237 -357 5 676 282 351 0 0 chr2L 11945603 11945768 -11065776 + (CAG)n Simple_repeat Simple_repeat 1 165 0 5 676 35 24 0 0 chr2L 11949496 11949538 -11062006 + AT_rich Low_complexity Low_complexity 1 42 0 5 676 359 118 23 23 chr2L 11949838 11949925 -11061619 + (TTG)n Simple_repeat Simple_repeat 3 89 0 5 676 23 54 0 0 chr2L 11953033 11953070 -11058474 + AT_rich Low_complexity Low_complexity 1 37 0 5 676 24 0 0 0 chr2L 11954209 11954233 -11057311 + AT_rich Low_complexity Low_complexity 1 24 0 5 676 26 50 0 0 chr2L 11954276 11954316 -11057228 + AT_rich Low_complexity Low_complexity 1 40 0 5 676 216 0 0 0 chr2L 11961698 11961722 -11049822 + (TATG)n Simple_repeat Simple_repeat 1 24 0 5 676 22 0 0 0 chr2L 11962424 11962446 -11049098 + AT_rich Low_complexity Low_complexity 1 22 0 5 676 183 80 0 0 chr2L 11962797 11962822 -11048722 + (CAT)n Simple_repeat Simple_repeat 1 25 0 5 676 183 162 0 0 chr2L 11962917 11962954 -11048590 + T-rich Low_complexity Low_complexity 1 37 0 5 676 22 0 0 0 chr2L 11964972 11964994 -11046550 + AT_rich Low_complexity Low_complexity 1 22 0 5 676 189 0 0 0 chr2L 11965734 11965755 -11045789 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 676 213 156 0 22 chr2L 11967149 11967195 -11044349 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 5 676 240 111 0 0 chr2L 11968285 11968321 -11043223 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 676 218 191 0 0 chr2L 11970500 11970542 -11041002 + CT-rich Low_complexity Low_complexity 1 42 0 5 676 190 81 26 26 chr2L 11970925 11970963 -11040581 + (TTGG)n Simple_repeat Simple_repeat 3 40 0 5 676 25 31 0 0 chr2L 11973288 11973320 -11038224 + AT_rich Low_complexity Low_complexity 1 32 0 5 676 222 37 0 0 chr2L 11973876 11973903 -11037641 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 676 29 0 0 0 chr2L 11974857 11974886 -11036658 + AT_rich Low_complexity Low_complexity 1 29 0 5 676 225 94 0 0 chr2L 11976959 11976991 -11034553 + (GCTG)n Simple_repeat Simple_repeat 1 32 0 5 676 24 0 0 0 chr2L 11977211 11977235 -11034309 + AT_rich Low_complexity Low_complexity 1 24 0 5 676 255 103 0 0 chr2L 11977896 11977935 -11033609 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 676 21 57 0 0 chr2L 11978057 11978092 -11033452 + AT_rich Low_complexity Low_complexity 1 35 0 5 676 25 51 0 0 chr2L 11978243 11978282 -11033262 + AT_rich Low_complexity Low_complexity 1 39 0 5 676 267 283 18 25 chr2L 11979558 11979721 -11031823 + A-rich Low_complexity Low_complexity 1 162 0 5 676 243 217 16 16 chr2L 11979810 11979871 -11031673 + (TATG)n Simple_repeat Simple_repeat 4 64 0 5 676 22 0 0 0 chr2L 11980725 11980747 -11030797 + AT_rich Low_complexity Low_complexity 1 22 0 5 676 36 23 0 0 chr2L 11981781 11981824 -11029720 + AT_rich Low_complexity Low_complexity 1 43 0 5 676 340 320 0 17 chr2L 11987083 11987264 -11024280 + CT-rich Low_complexity Low_complexity 1 178 0 5 676 21 36 0 0 chr2L 11989879 11989907 -11021637 + AT_rich Low_complexity Low_complexity 1 28 0 5 676 209 179 0 0 chr2L 11994207 11994246 -11017298 + (CTG)n Simple_repeat Simple_repeat 3 41 0 5 676 287 161 0 88 chr2L 11994254 11994356 -11017188 - ROO_I LTR Pao -7523 733 641 5 676 189 0 0 0 chr2L 11998118 11998139 -11013405 + (CTG)n Simple_repeat Simple_repeat 3 23 0 5 676 300 194 0 61 chr2L 11998168 11998267 -11013277 - ROO_I LTR Pao -7523 733 641 5 676 22 70 0 0 chr2L 12002411 12002454 -11009090 + AT_rich Low_complexity Low_complexity 1 43 0 5 676 26 30 0 0 chr2L 12002852 12002885 -11008659 + AT_rich Low_complexity Low_complexity 1 33 0 5 676 204 67 0 0 chr2L 12003473 12003503 -11008041 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 676 186 43 0 0 chr2L 12003859 12003882 -11007662 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 676 198 118 0 0 chr2L 12004471 12004505 -11007039 + (GTATG)n Simple_repeat Simple_repeat 5 38 0 5 676 210 244 0 0 chr2L 12006233 12006274 -11005270 + (CATA)n Simple_repeat Simple_repeat 3 43 0 5 676 29 28 0 0 chr2L 12006855 12006891 -11004653 + AT_rich Low_complexity Low_complexity 1 36 0 5 676 32 75 0 0 chr2L 12007928 12007995 -11003549 + AT_rich Low_complexity Low_complexity 1 67 0 5 676 21 0 0 0 chr2L 12014499 12014520 -10997024 + AT_rich Low_complexity Low_complexity 1 21 0 5 676 231 88 0 0 chr2L 12022202 12022236 -10989308 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 676 213 234 0 0 chr2L 12024304 12024368 -10987176 + (TCCG)n Simple_repeat Simple_repeat 2 65 0 5 676 183 80 0 0 chr2L 12025557 12025582 -10985962 + (CTAA)n Simple_repeat Simple_repeat 1 25 0 5 676 36 23 0 0 chr2L 12027041 12027084 -10984460 + AT_rich Low_complexity Low_complexity 1 43 0 5 676 229 159 0 73 chr2L 12027278 12027346 -10984198 + A-rich Low_complexity Low_complexity 5 67 0 5 676 224 100 25 0 chr2L 12027878 12027918 -10983626 + (CAT)n Simple_repeat Simple_repeat 2 42 0 5 676 200 233 0 0 chr2L 12028060 12028103 -10983441 + A-rich Low_complexity Low_complexity 1 43 0 5 676 27 29 0 0 chr2L 12029922 12029956 -10981588 + AT_rich Low_complexity Low_complexity 1 34 0 5 676 23 0 0 0 chr2L 12036139 12036162 -10975382 + AT_rich Low_complexity Low_complexity 1 23 0 5 676 207 69 0 0 chr2L 12041766 12041795 -10969749 + (TCC)n Simple_repeat Simple_repeat 2 30 0 5 676 213 209 0 0 chr2L 12041817 12041860 -10969684 + (TCG)n Simple_repeat Simple_repeat 1 43 0 5 676 194 159 0 43 chr2L 12044034 12044080 -10967464 + (TATG)n Simple_repeat Simple_repeat 2 45 0 5 676 192 97 0 0 chr2L 12044123 12044154 -10967390 + (TATG)n Simple_repeat Simple_repeat 2 32 0 5 676 21 57 0 0 chr2L 12044407 12044442 -10967102 + AT_rich Low_complexity Low_complexity 1 35 0 5 676 197 33 33 0 chr2L 12044779 12044809 -10966735 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 676 204 150 0 24 chr2L 12045101 12045142 -10966402 + (CATA)n Simple_repeat Simple_repeat 4 43 0 5 676 30 45 0 0 chr2L 12049037 12049081 -10962463 + AT_rich Low_complexity Low_complexity 1 44 0 5 676 24 53 0 0 chr2L 12054586 12054624 -10956920 + AT_rich Low_complexity Low_complexity 1 38 0 5 676 180 77 0 0 chr2L 12056037 12056063 -10955481 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 676 38 39 0 0 chr2L 12058266 12058318 -10953226 + AT_rich Low_complexity Low_complexity 1 52 0 5 677 3605 5 7 7 chr2L 12067384 12067798 -10943746 + DM297_LTR LTR Gypsy 1 414 0 5 677 54402 7 0 0 chr2L 12067798 12073965 -10937579 + DM297_I LTR Gypsy 1 6167 0 5 677 3605 5 7 7 chr2L 12073965 12074379 -10937165 + DM297_LTR LTR Gypsy 1 414 0 5 677 201 39 0 0 chr2L 12078235 12078261 -10933283 + (TTGG)n Simple_repeat Simple_repeat 4 29 0 5 677 23 0 0 0 chr2L 12078514 12078537 -10933007 + AT_rich Low_complexity Low_complexity 1 23 0 5 677 22 35 0 0 chr2L 12080639 12080668 -10930876 + AT_rich Low_complexity Low_complexity 1 29 0 5 677 39 38 0 0 chr2L 12080716 12080769 -10930775 + AT_rich Low_complexity Low_complexity 1 53 0 5 677 210 176 0 0 chr2L 12081142 12081193 -10930351 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 5 677 26 0 0 0 chr2L 12081745 12081771 -10929773 + AT_rich Low_complexity Low_complexity 1 26 0 5 677 32 57 0 0 chr2L 12088092 12088145 -10923399 + AT_rich Low_complexity Low_complexity 1 53 0 5 677 29 90 0 0 chr2L 12091660 12091738 -10919806 + AT_rich Low_complexity Low_complexity 1 78 0 5 677 276 188 0 0 chr2L 12096153 12096222 -10915322 + (TCG)n Simple_repeat Simple_repeat 2 70 0 5 677 21 0 0 0 chr2L 12096566 12096587 -10914957 + AT_rich Low_complexity Low_complexity 1 21 0 5 677 23 33 0 0 chr2L 12103444 12103474 -10908070 + AT_rich Low_complexity Low_complexity 1 30 0 5 677 219 152 0 0 chr2L 12103994 12104040 -10907504 + (CAA)n Simple_repeat Simple_repeat 2 47 0 5 677 21 0 0 0 chr2L 12110811 12110832 -10900712 + AT_rich Low_complexity Low_complexity 1 21 0 5 677 26 0 0 0 chr2L 12114414 12114440 -10897104 + AT_rich Low_complexity Low_complexity 1 26 0 5 677 28 29 0 0 chr2L 12116032 12116067 -10895477 + AT_rich Low_complexity Low_complexity 1 35 0 5 677 39 0 0 0 chr2L 12125909 12125948 -10885596 + AT_rich Low_complexity Low_complexity 1 39 0 5 677 226 264 0 32 chr2L 12128886 12128980 -10882564 + ROO_I LTR Pao 644 734 -7522 5 677 196 130 0 53 chr2L 12129274 12129331 -10882213 + (CAG)n Simple_repeat Simple_repeat 3 56 0 5 677 21 0 0 0 chr2L 12130551 12130572 -10880972 + AT_rich Low_complexity Low_complexity 1 21 0 5 677 21 0 0 0 chr2L 12133883 12133904 -10877640 + AT_rich Low_complexity Low_complexity 1 21 0 5 677 21 0 0 0 chr2L 12136301 12136322 -10875222 + AT_rich Low_complexity Low_complexity 1 21 0 5 677 30 93 0 0 chr2L 12136454 12136540 -10875004 + AT_rich Low_complexity Low_complexity 1 86 0 5 677 23 86 0 0 chr2L 12139417 12139475 -10872069 + AT_rich Low_complexity Low_complexity 1 58 0 5 677 50 42 0 0 chr2L 12141290 12141361 -10870183 + AT_rich Low_complexity Low_complexity 1 71 0 5 677 28 0 0 0 chr2L 12142931 12142959 -10868585 + AT_rich Low_complexity Low_complexity 1 28 0 5 677 22 0 0 0 chr2L 12143031 12143053 -10868491 + AT_rich Low_complexity Low_complexity 1 22 0 5 677 213 94 0 0 chr2L 12143928 12143960 -10867584 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 677 233 262 0 0 chr2L 12147086 12147147 -10864397 + DNAREP1_DM LINE Penelope 2 62 -532 5 677 24 0 0 0 chr2L 12149269 12149293 -10862251 + AT_rich Low_complexity Low_complexity 1 24 0 5 677 198 0 0 0 chr2L 12150692 12150714 -10860830 + (A)n Simple_repeat Simple_repeat 1 22 0 5 677 252 111 0 0 chr2L 12151795 12151840 -10859704 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 677 22 35 0 0 chr2L 12152660 12152689 -10858855 + AT_rich Low_complexity Low_complexity 1 29 0 5 677 21 0 0 0 chr2L 12155111 12155132 -10856412 + AT_rich Low_complexity Low_complexity 1 21 0 5 677 41 21 0 0 chr2L 12155268 12155316 -10856228 + AT_rich Low_complexity Low_complexity 1 48 0 5 677 319 244 98 15 chr2L 12156965 12157098 -10854446 + DNAREP1_DM LINE Penelope 39 182 -412 5 677 24 67 0 0 chr2L 12159475 12159520 -10852024 + AT_rich Low_complexity Low_complexity 1 45 0 5 677 28 48 0 0 chr2L 12161072 12161114 -10850430 + AT_rich Low_complexity Low_complexity 1 42 0 5 677 228 35 0 0 chr2L 12161814 12161843 -10849701 + (T)n Simple_repeat Simple_repeat 1 29 0 5 677 23 54 0 0 chr2L 12166843 12166880 -10844664 + AT_rich Low_complexity Low_complexity 1 37 0 5 677 31 44 0 0 chr2L 12172627 12172672 -10838872 + AT_rich Low_complexity Low_complexity 1 45 0 5 677 188 35 35 0 chr2L 12174139 12174168 -10837376 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 677 183 42 0 0 chr2L 12177250 12177274 -10834270 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 5 677 251 242 0 0 chr2L 12183735 12183801 -10827743 - DNAREP1_DM LINE Penelope -188 406 341 5 677 218 226 38 0 chr2L 12186383 12186436 -10825108 + (CTCG)n Simple_repeat Simple_repeat 2 56 0 5 677 23 0 0 0 chr2L 12189414 12189437 -10822107 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 210 244 0 35 chr2L 12189804 12189906 -10821638 + A-rich Low_complexity Low_complexity 1 98 0 5 678 22 0 0 0 chr2L 12194737 12194759 -10816785 + AT_rich Low_complexity Low_complexity 1 22 0 5 678 26 50 0 0 chr2L 12194771 12194811 -10816733 + AT_rich Low_complexity Low_complexity 1 40 0 5 678 23 33 0 0 chr2L 12195247 12195277 -10816267 + AT_rich Low_complexity Low_complexity 1 30 0 5 678 248 169 200 0 chr2L 12197145 12197210 -10814334 - DNAREP1_DM LINE Penelope 0 594 517 5 678 214 148 18 18 chr2L 12198367 12198422 -10813122 + (TTATA)n Simple_repeat Simple_repeat 2 56 0 5 678 25 31 0 0 chr2L 12200226 12200258 -10811286 + AT_rich Low_complexity Low_complexity 1 32 0 5 678 203 258 0 0 chr2L 12201287 12201349 -10810195 + T-rich Low_complexity Low_complexity 5 66 0 5 678 23 0 0 0 chr2L 12201471 12201494 -10810050 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 222 204 0 0 chr2L 12201587 12201631 -10809913 + (CACGT)n Simple_repeat Simple_repeat 3 46 0 5 678 22 0 0 0 chr2L 12202230 12202252 -10809292 + AT_rich Low_complexity Low_complexity 1 22 0 5 678 27 0 0 0 chr2L 12203586 12203613 -10807931 + AT_rich Low_complexity Low_complexity 1 27 0 5 678 213 94 0 0 chr2L 12204333 12204365 -10807179 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 678 35 0 0 0 chr2L 12204695 12204730 -10806814 + AT_rich Low_complexity Low_complexity 1 35 0 5 678 28 61 0 0 chr2L 12204937 12204986 -10806558 + AT_rich Low_complexity Low_complexity 1 49 0 5 678 24 32 0 0 chr2L 12205704 12205735 -10805809 + AT_rich Low_complexity Low_complexity 1 31 0 5 678 29 0 0 0 chr2L 12210686 12210715 -10800829 + AT_rich Low_complexity Low_complexity 1 29 0 5 678 207 114 0 0 chr2L 12211429 12211464 -10800080 + (A)n Simple_repeat Simple_repeat 1 35 0 5 678 21 0 0 0 chr2L 12213706 12213727 -10797817 + AT_rich Low_complexity Low_complexity 1 21 0 5 678 21 36 0 0 chr2L 12214681 12214709 -10796835 + AT_rich Low_complexity Low_complexity 1 28 0 5 678 25 31 0 0 chr2L 12215769 12215801 -10795743 + AT_rich Low_complexity Low_complexity 1 32 0 5 678 22 0 0 0 chr2L 12216803 12216825 -10794719 + AT_rich Low_complexity Low_complexity 1 22 0 5 678 21 0 0 0 chr2L 12218019 12218040 -10793504 + AT_rich Low_complexity Low_complexity 1 21 0 5 678 25 31 0 0 chr2L 12220981 12221013 -10790531 + AT_rich Low_complexity Low_complexity 1 32 0 5 678 22 0 0 0 chr2L 12222015 12222037 -10789507 + AT_rich Low_complexity Low_complexity 1 22 0 5 678 21 0 0 0 chr2L 12223231 12223252 -10788292 + AT_rich Low_complexity Low_complexity 1 21 0 5 678 25 0 0 0 chr2L 12227016 12227041 -10784503 + AT_rich Low_complexity Low_complexity 1 25 0 5 678 22 70 0 0 chr2L 12228198 12228241 -10783303 + AT_rich Low_complexity Low_complexity 1 43 0 5 678 23 0 0 0 chr2L 12231113 12231136 -10780408 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 26 30 0 0 chr2L 12233345 12233378 -10778166 + AT_rich Low_complexity Low_complexity 1 33 0 5 678 270 0 0 0 chr2L 12240523 12240553 -10770991 + (GCTG)n Simple_repeat Simple_repeat 3 32 0 5 678 189 0 0 0 chr2L 12240600 12240621 -10770923 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 678 239 296 9 9 chr2L 12241379 12241488 -10770056 + (CCA)n Simple_repeat Simple_repeat 2 110 0 5 678 244 254 0 0 chr2L 12241644 12241711 -10769833 + GA-rich Low_complexity Low_complexity 4 70 0 5 678 279 93 0 0 chr2L 12244727 12244770 -10766774 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 678 29 47 0 0 chr2L 12245423 12245466 -10766078 + AT_rich Low_complexity Low_complexity 1 43 0 5 678 24 0 0 0 chr2L 12246063 12246087 -10765457 + AT_rich Low_complexity Low_complexity 1 24 0 5 678 361 121 24 0 chr2L 12246960 12247043 -10764501 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 678 25 0 0 0 chr2L 12251418 12251443 -10760101 + AT_rich Low_complexity Low_complexity 1 25 0 5 678 23 0 0 0 chr2L 12252686 12252709 -10758835 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 195 42 0 0 chr2L 12253225 12253249 -10758295 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 678 219 204 20 0 chr2L 12253294 12253343 -10758201 + (CAA)n Simple_repeat Simple_repeat 2 51 0 5 678 396 0 0 0 chr2L 12256319 12256363 -10755181 + (T)n Simple_repeat Simple_repeat 1 44 0 5 678 38 51 0 0 chr2L 12257110 12257169 -10754375 + AT_rich Low_complexity Low_complexity 1 59 0 5 678 388 162 15 0 chr2L 12262558 12262626 -10748918 + HOBO DNA hAT 2791 2859 -157 5 678 21 57 0 0 chr2L 12262866 12262901 -10748643 + AT_rich Low_complexity Low_complexity 1 35 0 5 678 201 238 0 31 chr2L 12263352 12263417 -10748127 + A-rich Low_complexity Low_complexity 1 63 0 5 678 189 154 0 0 chr2L 12264838 12264877 -10746667 + T-rich Low_complexity Low_complexity 1 39 0 5 678 189 74 0 0 chr2L 12265640 12265667 -10745877 + (T)n Simple_repeat Simple_repeat 1 27 0 5 678 33 25 0 0 chr2L 12266909 12266949 -10744595 + AT_rich Low_complexity Low_complexity 1 40 0 5 678 186 103 0 0 chr2L 12267948 12267977 -10743567 + (CAA)n Simple_repeat Simple_repeat 1 29 0 5 678 31 26 0 0 chr2L 12268230 12268268 -10743276 + AT_rich Low_complexity Low_complexity 1 38 0 5 678 25 0 0 0 chr2L 12268389 12268414 -10743130 + AT_rich Low_complexity Low_complexity 1 25 0 5 678 24 0 0 0 chr2L 12268965 12268989 -10742555 + AT_rich Low_complexity Low_complexity 1 24 0 5 678 183 42 0 0 chr2L 12269175 12269199 -10742345 + (T)n Simple_repeat Simple_repeat 1 24 0 5 678 24 77 0 0 chr2L 12271457 12271509 -10740035 + AT_rich Low_complexity Low_complexity 1 52 0 5 678 228 163 0 0 chr2L 12271681 12271724 -10739820 + (CAA)n Simple_repeat Simple_repeat 2 44 0 5 678 180 0 0 0 chr2L 12272679 12272699 -10738845 + (CATA)n Simple_repeat Simple_repeat 1 20 0 5 678 24 96 0 0 chr2L 12273976 12274049 -10737495 + AT_rich Low_complexity Low_complexity 1 73 0 5 678 297 51 0 0 chr2L 12276911 12276950 -10734594 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 678 300 27 0 0 chr2L 12277991 12278028 -10733516 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 678 27 0 0 0 chr2L 12278263 12278290 -10733254 + AT_rich Low_complexity Low_complexity 1 27 0 5 678 23 0 0 0 chr2L 12279614 12279637 -10731907 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 23 0 0 0 chr2L 12279886 12279909 -10731635 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 23 0 0 0 chr2L 12280827 12280850 -10730694 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 249 32 0 0 chr2L 12285972 12286003 -10725541 - DNAREP1_DM LINE Penelope -110 484 454 5 678 213 178 0 0 chr2L 12286340 12286385 -10725159 + A-rich Low_complexity Low_complexity 1 45 0 5 678 22 56 0 0 chr2L 12288508 12288544 -10723000 + AT_rich Low_complexity Low_complexity 1 36 0 5 678 216 111 0 0 chr2L 12288686 12288722 -10722822 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 678 248 161 0 16 chr2L 12288717 12288780 -10722764 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 678 180 77 0 0 chr2L 12289158 12289184 -10722360 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 678 207 69 0 0 chr2L 12289210 12289239 -10722305 + (CAG)n Simple_repeat Simple_repeat 2 30 0 5 678 22 35 0 0 chr2L 12289547 12289576 -10721968 + AT_rich Low_complexity Low_complexity 1 29 0 5 678 26 0 0 0 chr2L 12291450 12291476 -10720068 + AT_rich Low_complexity Low_complexity 1 26 0 5 678 228 167 0 0 chr2L 12292188 12292236 -10719308 + (ACTG)n Simple_repeat Simple_repeat 3 50 0 5 678 180 0 0 0 chr2L 12294727 12294747 -10716797 + (CAA)n Simple_repeat Simple_repeat 3 22 0 5 678 189 121 0 0 chr2L 12295140 12295173 -10716371 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 678 232 186 0 102 chr2L 12295598 12295706 -10715838 + (TTCGGG)n Simple_repeat Simple_repeat 6 102 0 5 678 195 42 0 0 chr2L 12296830 12296854 -10714690 + (ATG)n Simple_repeat Simple_repeat 1 24 0 5 678 237 33 0 0 chr2L 12296894 12296924 -10714620 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 678 40 0 0 0 chr2L 12297526 12297566 -10713978 + AT_rich Low_complexity Low_complexity 1 40 0 5 678 237 33 0 0 chr2L 12303258 12303288 -10708256 + (TTTTTG)n Simple_repeat Simple_repeat 5 34 0 5 678 186 118 0 0 chr2L 12306056 12306090 -10705454 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 678 24 85 0 0 chr2L 12306278 12306337 -10705207 + AT_rich Low_complexity Low_complexity 1 59 0 5 678 24 32 0 0 chr2L 12307501 12307532 -10704012 + AT_rich Low_complexity Low_complexity 1 31 0 5 678 255 203 0 33 chr2L 12310245 12310306 -10701238 + (ATG)n Simple_repeat Simple_repeat 1 59 0 5 678 186 103 0 0 chr2L 12311104 12311133 -10700411 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 678 23 33 0 0 chr2L 12312773 12312803 -10698741 + AT_rich Low_complexity Low_complexity 1 30 0 5 678 21 0 0 0 chr2L 12313429 12313450 -10698094 + AT_rich Low_complexity Low_complexity 1 21 0 5 678 23 54 0 0 chr2L 12317353 12317390 -10694154 + AT_rich Low_complexity Low_complexity 1 37 0 5 678 224 200 0 0 chr2L 12317988 12318028 -10693516 + (TTCGG)n Simple_repeat Simple_repeat 4 43 0 5 678 23 78 0 0 chr2L 12318312 12318363 -10693181 + AT_rich Low_complexity Low_complexity 1 51 0 5 679 26 30 0 0 chr2L 12321151 12321184 -10690360 + AT_rich Low_complexity Low_complexity 1 33 0 5 679 287 170 0 0 chr2L 12322002 12322055 -10689489 + DNAREP1_DM LINE Penelope 1 53 -541 5 679 219 196 20 0 chr2L 12325147 12325198 -10686346 + T-rich Low_complexity Low_complexity 2 53 0 5 679 34 24 0 0 chr2L 12328108 12328149 -10683395 + AT_rich Low_complexity Low_complexity 1 41 0 5 679 22 35 0 0 chr2L 12328965 12328994 -10682550 + AT_rich Low_complexity Low_complexity 1 29 0 5 679 23 0 0 0 chr2L 12329951 12329974 -10681570 + AT_rich Low_complexity Low_complexity 1 23 0 5 679 21 0 0 0 chr2L 12330036 12330057 -10681487 + AT_rich Low_complexity Low_complexity 1 21 0 5 679 23 54 0 0 chr2L 12333306 12333343 -10678201 + AT_rich Low_complexity Low_complexity 1 37 0 5 679 25 0 0 0 chr2L 12333355 12333380 -10678164 + AT_rich Low_complexity Low_complexity 1 25 0 5 679 23 0 0 0 chr2L 12334464 12334487 -10677057 + AT_rich Low_complexity Low_complexity 1 23 0 5 679 230 246 0 0 chr2L 12335561 12335618 -10675926 + (GAATG)n Simple_repeat Simple_repeat 3 59 0 5 679 23 33 0 0 chr2L 12341252 12341282 -10670262 + AT_rich Low_complexity Low_complexity 1 30 0 5 679 22 35 0 0 chr2L 12343690 12343719 -10667825 + AT_rich Low_complexity Low_complexity 1 29 0 5 679 23 0 0 0 chr2L 12343926 12343949 -10667595 + AT_rich Low_complexity Low_complexity 1 23 0 5 679 231 173 0 0 chr2L 12345513 12345565 -10665979 + (CGGT)n Simple_repeat Simple_repeat 3 54 0 5 679 189 0 0 0 chr2L 12347275 12347296 -10664248 + (ACCG)n Simple_repeat Simple_repeat 1 21 0 5 679 184 59 0 56 chr2L 12349287 12349323 -10662221 + (TTGGGG)n Simple_repeat Simple_repeat 1 34 0 5 679 21 0 0 0 chr2L 12351441 12351462 -10660082 + AT_rich Low_complexity Low_complexity 1 21 0 5 679 297 149 0 84 chr2L 12352033 12352128 -10659416 + ROO_I LTR Pao 650 736 -7520 5 679 283 208 0 86 chr2L 12352189 12352305 -10659239 + ROO_I LTR Pao 641 746 -7510 5 679 255 269 0 25 chr2L 12352432 12352512 -10659032 + ROO_I LTR Pao 662 739 -7517 5 679 274 225 8 75 chr2L 12352559 12352679 -10658865 + ROO_I LTR Pao 637 748 -7508 5 679 28 0 0 0 chr2L 12355483 12355511 -10656033 + AT_rich Low_complexity Low_complexity 1 28 0 5 679 23 33 0 0 chr2L 12357964 12357994 -10653550 + AT_rich Low_complexity Low_complexity 1 30 0 5 679 183 100 0 0 chr2L 12358537 12358567 -10652977 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 679 21 0 0 0 chr2L 12359468 12359489 -10652055 + AT_rich Low_complexity Low_complexity 1 21 0 5 679 228 290 0 0 chr2L 12359807 12359869 -10651675 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 679 209 176 0 0 chr2L 12361787 12361821 -10649723 + (TTCGG)n Simple_repeat Simple_repeat 2 35 0 5 679 22 70 0 0 chr2L 12364159 12364202 -10647342 + AT_rich Low_complexity Low_complexity 1 43 0 5 679 227 167 18 18 chr2L 12364259 12364314 -10647230 + (TTATA)n Simple_repeat Simple_repeat 5 59 0 5 679 22 56 0 0 chr2L 12365845 12365881 -10645663 + AT_rich Low_complexity Low_complexity 1 36 0 5 679 29 0 0 0 chr2L 12369047 12369076 -10642468 + AT_rich Low_complexity Low_complexity 1 29 0 5 679 204 170 0 41 chr2L 12371402 12371451 -10640093 + (CAA)n Simple_repeat Simple_repeat 2 48 0 5 679 189 0 0 0 chr2L 12371571 12371592 -10639952 + (TAA)n Simple_repeat Simple_repeat 3 23 0 5 679 200 315 18 0 chr2L 12374910 12375021 -10636523 + (TG)n Simple_repeat Simple_repeat 2 114 0 5 679 26 0 0 0 chr2L 12378588 12378614 -10632930 + AT_rich Low_complexity Low_complexity 1 26 0 5 679 189 74 0 0 chr2L 12379422 12379449 -10632095 + (CTG)n Simple_repeat Simple_repeat 3 29 0 5 679 313 117 33 0 chr2L 12380647 12380707 -10630837 + (CTG)n Simple_repeat Simple_repeat 3 64 0 5 679 180 0 0 0 chr2L 12382865 12382885 -10628659 + (CGAAA)n Simple_repeat Simple_repeat 1 20 0 5 679 21 36 0 0 chr2L 12383270 12383298 -10628246 + AT_rich Low_complexity Low_complexity 1 28 0 5 679 213 139 0 0 chr2L 12385241 12385284 -10626260 + (CAGT)n Simple_repeat Simple_repeat 4 46 0 5 679 198 0 0 0 chr2L 12386148 12386170 -10625374 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 679 26 50 0 0 chr2L 12388752 12388792 -10622752 + AT_rich Low_complexity Low_complexity 1 40 0 5 679 180 158 0 0 chr2L 12392473 12392511 -10619033 + CT-rich Low_complexity Low_complexity 2 39 0 5 679 235 257 20 54 chr2L 12392733 12392881 -10618663 + T-rich Low_complexity Low_complexity 3 145 0 5 679 252 259 28 43 chr2L 12392933 12393074 -10618470 + T-rich Low_complexity Low_complexity 6 144 0 5 679 35 54 0 0 chr2L 12393116 12393172 -10618372 + AT_rich Low_complexity Low_complexity 1 56 0 5 679 208 148 31 62 chr2L 12393280 12393345 -10618199 + (CCAA)n Simple_repeat Simple_repeat 2 64 0 5 679 201 175 0 0 chr2L 12393661 12393701 -10617843 + (CAG)n Simple_repeat Simple_repeat 1 40 0 5 679 22 56 0 0 chr2L 12394040 12394076 -10617468 + AT_rich Low_complexity Low_complexity 1 36 0 5 679 220 164 17 52 chr2L 12394810 12394868 -10616676 + A-rich Low_complexity Low_complexity 2 57 0 5 679 27 0 0 0 chr2L 12395495 12395522 -10616022 + AT_rich Low_complexity Low_complexity 1 27 0 5 679 189 154 0 0 chr2L 12395725 12395764 -10615780 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 679 21 0 0 0 chr2L 12397103 12397124 -10614420 + AT_rich Low_complexity Low_complexity 1 21 0 5 679 21 36 0 0 chr2L 12398058 12398086 -10613458 + AT_rich Low_complexity Low_complexity 1 28 0 5 679 256 162 43 14 chr2L 12401996 12402065 -10609479 + (TATAA)n Simple_repeat Simple_repeat 4 74 0 5 679 22 88 0 0 chr2L 12403347 12403404 -10608140 + AT_rich Low_complexity Low_complexity 1 57 0 5 679 26 0 0 0 chr2L 12406041 12406067 -10605477 + AT_rich Low_complexity Low_complexity 1 26 0 5 679 21 57 0 0 chr2L 12407740 12407775 -10603769 + AT_rich Low_complexity Low_complexity 1 35 0 5 679 22 56 0 0 chr2L 12409361 12409397 -10602147 + AT_rich Low_complexity Low_complexity 1 36 0 5 679 27 62 0 0 chr2L 12410315 12410363 -10601181 + AT_rich Low_complexity Low_complexity 1 48 0 5 679 198 0 0 0 chr2L 12411653 12411675 -10599869 + (GCTG)n Simple_repeat Simple_repeat 1 22 0 5 679 32 0 0 0 chr2L 12413168 12413200 -10598344 + AT_rich Low_complexity Low_complexity 1 32 0 5 679 21 0 0 0 chr2L 12414852 12414873 -10596671 + AT_rich Low_complexity Low_complexity 1 21 0 5 679 23 54 0 0 chr2L 12415529 12415566 -10595978 + AT_rich Low_complexity Low_complexity 1 37 0 5 679 21 36 0 0 chr2L 12415861 12415889 -10595655 + AT_rich Low_complexity Low_complexity 1 28 0 5 679 24 53 0 0 chr2L 12416827 12416865 -10594679 + AT_rich Low_complexity Low_complexity 1 38 0 5 679 22 35 0 0 chr2L 12420435 12420464 -10591080 + AT_rich Low_complexity Low_complexity 1 29 0 5 679 186 143 0 0 chr2L 12421902 12421937 -10589607 + (TGAG)n Simple_repeat Simple_repeat 1 35 0 5 679 40 37 0 0 chr2L 12422196 12422250 -10589294 + AT_rich Low_complexity Low_complexity 1 54 0 5 679 22 35 0 0 chr2L 12423598 12423627 -10587917 + AT_rich Low_complexity Low_complexity 1 29 0 5 679 29 47 0 0 chr2L 12424457 12424500 -10587044 + AT_rich Low_complexity Low_complexity 1 43 0 5 679 38 39 0 0 chr2L 12427779 12427831 -10583713 + AT_rich Low_complexity Low_complexity 1 52 0 5 679 195 42 0 0 chr2L 12431332 12431356 -10580188 + (CGAGA)n Simple_repeat Simple_repeat 2 25 0 5 679 304 216 0 58 chr2L 12431446 12431549 -10579995 + ROO_I LTR Pao 637 733 -7523 5 679 22 56 0 0 chr2L 12434140 12434176 -10577368 + AT_rich Low_complexity Low_complexity 1 36 0 5 679 32 75 0 0 chr2L 12434313 12434380 -10577164 + AT_rich Low_complexity Low_complexity 1 67 0 5 679 202 260 0 0 chr2L 12435106 12435156 -10576388 + (CGG)n Simple_repeat Simple_repeat 2 51 0 5 679 26 30 0 0 chr2L 12440947 12440980 -10570564 + AT_rich Low_complexity Low_complexity 1 33 0 5 679 32 0 0 0 chr2L 12441349 12441381 -10570163 + AT_rich Low_complexity Low_complexity 1 32 0 5 679 21 82 0 0 chr2L 12441395 12441444 -10570100 + AT_rich Low_complexity Low_complexity 1 49 0 5 680 243 173 24 12 chr2L 12457326 12457408 -10554136 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 680 293 301 18 9 chr2L 12457774 12457888 -10553656 + (CTG)n Simple_repeat Simple_repeat 1 115 0 5 680 216 0 0 0 chr2L 12458960 12458984 -10552560 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 5 680 25 0 0 0 chr2L 12459264 12459289 -10552255 + AT_rich Low_complexity Low_complexity 1 25 0 5 680 207 196 0 0 chr2L 12461682 12461728 -10549816 + T-rich Low_complexity Low_complexity 1 46 0 5 680 24 0 0 0 chr2L 12463523 12463547 -10547997 + AT_rich Low_complexity Low_complexity 1 24 0 5 680 34 24 0 0 chr2L 12463723 12463764 -10547780 + AT_rich Low_complexity Low_complexity 1 41 0 5 680 185 0 40 0 chr2L 12464484 12464509 -10547035 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5 680 180 0 0 0 chr2L 12465035 12465055 -10546489 + (TCCA)n Simple_repeat Simple_repeat 1 20 0 5 680 21 0 0 0 chr2L 12465779 12465800 -10545744 + AT_rich Low_complexity Low_complexity 1 21 0 5 680 214 65 62 42 chr2L 12466263 12466311 -10545233 + (TTAAA)n Simple_repeat Simple_repeat 5 53 0 5 680 28 0 0 0 chr2L 12469170 12469198 -10542346 + AT_rich Low_complexity Low_complexity 1 28 0 5 680 186 167 0 0 chr2L 12469283 12469319 -10542225 + (TATG)n Simple_repeat Simple_repeat 1 36 0 5 680 21 36 0 0 chr2L 12470135 12470163 -10541381 + AT_rich Low_complexity Low_complexity 1 28 0 5 680 25 0 0 0 chr2L 12470294 12470319 -10541225 + AT_rich Low_complexity Low_complexity 1 25 0 5 680 200 122 0 39 chr2L 12472098 12472149 -10539395 + A-rich Low_complexity Low_complexity 4 52 0 5 680 183 129 0 0 chr2L 12473572 12473603 -10537941 + (CATA)n Simple_repeat Simple_repeat 2 32 0 5 680 27 0 0 0 chr2L 12475534 12475561 -10535983 + AT_rich Low_complexity Low_complexity 1 27 0 5 680 27 73 0 0 chr2L 12478264 12478319 -10533225 + AT_rich Low_complexity Low_complexity 1 55 0 5 680 203 276 0 0 chr2L 12479444 12479502 -10532042 + A-rich Low_complexity Low_complexity 1 58 0 5 680 23 0 0 0 chr2L 12479525 12479548 -10531996 + AT_rich Low_complexity Low_complexity 1 23 0 5 680 192 125 0 0 chr2L 12480276 12480308 -10531236 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 680 35 41 0 0 chr2L 12486041 12486090 -10525454 + AT_rich Low_complexity Low_complexity 1 49 0 5 680 26 30 0 0 chr2L 12486821 12486854 -10524690 + AT_rich Low_complexity Low_complexity 1 33 0 5 680 279 79 0 0 chr2L 12489574 12489612 -10521932 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 680 366 134 0 0 chr2L 12490967 12491034 -10520510 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 680 22 0 0 0 chr2L 12491472 12491494 -10520050 + AT_rich Low_complexity Low_complexity 1 22 0 5 680 27 0 0 0 chr2L 12492275 12492302 -10519242 + AT_rich Low_complexity Low_complexity 1 27 0 5 680 192 77 0 0 chr2L 12493106 12493132 -10518412 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 5 680 27 49 0 0 chr2L 12493766 12493807 -10517737 + AT_rich Low_complexity Low_complexity 1 41 0 5 680 21 71 0 0 chr2L 12495551 12495593 -10515951 + AT_rich Low_complexity Low_complexity 1 42 0 5 680 198 0 0 0 chr2L 12496087 12496109 -10515435 + (A)n Simple_repeat Simple_repeat 1 22 0 5 680 27 0 0 0 chr2L 12498372 12498399 -10513145 + AT_rich Low_complexity Low_complexity 1 27 0 5 680 291 283 0 11 chr2L 12498632 12498725 -10512819 + (CTG)n Simple_repeat Simple_repeat 1 92 0 5 680 252 86 0 0 chr2L 12501812 12501847 -10509697 + (CAGTT)n Simple_repeat Simple_repeat 2 36 0 5 680 36 23 0 0 chr2L 12503819 12503862 -10507682 + AT_rich Low_complexity Low_complexity 1 43 0 5 680 21 0 0 0 chr2L 12504450 12504471 -10507073 + AT_rich Low_complexity Low_complexity 1 21 0 5 680 235 104 0 40 chr2L 12505113 12505163 -10506381 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 680 24 0 0 0 chr2L 12507264 12507288 -10504256 + AT_rich Low_complexity Low_complexity 1 24 0 5 680 230 125 21 0 chr2L 12507747 12507795 -10503749 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 680 213 238 0 0 chr2L 12507842 12507884 -10503660 + (CAA)n Simple_repeat Simple_repeat 2 43 0 5 680 22 0 0 0 chr2L 12509787 12509809 -10501735 + AT_rich Low_complexity Low_complexity 1 22 0 5 680 402 21 0 0 chr2L 12510162 12510209 -10501335 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 680 194 0 39 0 chr2L 12510865 12510891 -10500653 + (TTTTC)n Simple_repeat Simple_repeat 5 31 0 5 680 205 183 16 32 chr2L 12513427 12513489 -10498055 + (TAAA)n Simple_repeat Simple_repeat 3 63 0 5 680 252 319 0 41 chr2L 12513880 12514050 -10497494 + T-rich Low_complexity Low_complexity 1 163 0 5 680 26 0 0 0 chr2L 12514628 12514654 -10496890 + AT_rich Low_complexity Low_complexity 1 26 0 5 680 24 0 0 0 chr2L 12515221 12515245 -10496299 + AT_rich Low_complexity Low_complexity 1 24 0 5 680 186 43 0 0 chr2L 12515811 12515834 -10495710 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 5 680 21 0 0 0 chr2L 12516040 12516061 -10495483 + AT_rich Low_complexity Low_complexity 1 21 0 5 680 21 36 0 0 chr2L 12517768 12517796 -10493748 + AT_rich Low_complexity Low_complexity 1 28 0 5 680 186 43 0 0 chr2L 12519371 12519394 -10492150 + (AGGGGG)n Simple_repeat Simple_repeat 2 24 0 5 680 25 65 0 0 chr2L 12519844 12519890 -10491654 + AT_rich Low_complexity Low_complexity 1 46 0 5 680 34 42 0 0 chr2L 12522328 12522376 -10489168 + AT_rich Low_complexity Low_complexity 1 48 0 5 680 28 0 0 0 chr2L 12523244 12523272 -10488272 + AT_rich Low_complexity Low_complexity 1 28 0 5 680 405 0 0 0 chr2L 12523353 12523398 -10488146 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 680 21 0 0 0 chr2L 12523876 12523897 -10487647 + AT_rich Low_complexity Low_complexity 1 21 0 5 680 210 296 6 66 chr2L 12524405 12524586 -10486958 + A-rich Low_complexity Low_complexity 4 173 0 5 680 219 36 0 0 chr2L 12526333 12526361 -10485183 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 5 680 207 0 0 0 chr2L 12530554 12530577 -10480967 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 680 234 128 0 0 chr2L 12532519 12532558 -10478986 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 680 29 0 0 0 chr2L 12532953 12532982 -10478562 + AT_rich Low_complexity Low_complexity 1 29 0 5 680 303 28 0 0 chr2L 12533243 12533279 -10478265 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 680 26 0 0 0 chr2L 12533701 12533727 -10477817 + AT_rich Low_complexity Low_complexity 1 26 0 5 680 27 0 0 0 chr2L 12535354 12535381 -10476163 + AT_rich Low_complexity Low_complexity 1 27 0 5 680 228 67 0 0 chr2L 12535497 12535527 -10476017 + (A)n Simple_repeat Simple_repeat 1 30 0 5 680 200 170 19 0 chr2L 12536322 12536375 -10475169 + (CTG)n Simple_repeat Simple_repeat 3 56 0 5 680 257 162 0 0 chr2L 12536529 12536597 -10474947 - ROO_I LTR Pao -7512 744 677 5 680 201 39 0 0 chr2L 12536701 12536727 -10474817 + (CTG)n Simple_repeat Simple_repeat 2 27 0 5 680 294 270 24 24 chr2L 12536828 12536995 -10474549 + (CTG)n Simple_repeat Simple_repeat 2 168 0 5 680 195 42 0 0 chr2L 12537079 12537103 -10474441 + (CTG)n Simple_repeat Simple_repeat 2 25 0 5 680 204 40 0 0 chr2L 12537370 12537395 -10474149 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 680 276 100 0 0 chr2L 12537798 12537838 -10473706 + (CTG)n Simple_repeat Simple_repeat 2 41 0 5 680 297 140 0 0 chr2L 12538698 12538755 -10472789 + (ATG)n Simple_repeat Simple_repeat 3 59 0 5 680 242 220 11 42 chr2L 12538850 12538945 -10472599 - ROO_I LTR Pao -7525 731 640 5 680 250 184 9 55 chr2L 12539330 12539439 -10472105 - ROO_I LTR Pao -7513 743 640 5 680 229 274 19 0 chr2L 12539508 12539614 -10471930 - ROO_I LTR Pao -7510 746 639 5 680 267 104 0 0 chr2L 12540010 12540058 -10471486 + (CGATA)n Simple_repeat Simple_repeat 1 48 0 5 680 291 270 0 20 chr2L 12540437 12540539 -10471005 + (CA)n Simple_repeat Simple_repeat 2 101 0 5 680 24 53 0 0 chr2L 12542117 12542155 -10469389 + AT_rich Low_complexity Low_complexity 1 38 0 5 680 210 91 0 0 chr2L 12545443 12545476 -10466068 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 680 192 97 0 0 chr2L 12545860 12545891 -10465653 + (GA)n Simple_repeat Simple_repeat 1 31 0 5 680 257 287 0 34 chr2L 12546293 12546412 -10465132 + (CA)n Simple_repeat Simple_repeat 2 116 0 5 680 21 36 0 0 chr2L 12546609 12546637 -10464907 + AT_rich Low_complexity Low_complexity 1 28 0 5 680 44 63 0 0 chr2L 12547006 12547085 -10464459 + AT_rich Low_complexity Low_complexity 1 79 0 5 680 212 170 0 19 chr2L 12547875 12547929 -10463615 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 680 198 0 0 0 chr2L 12549354 12549376 -10462168 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 680 23 33 0 0 chr2L 12552364 12552394 -10459150 + AT_rich Low_complexity Low_complexity 1 30 0 5 680 21 0 0 0 chr2L 12557661 12557682 -10453862 + AT_rich Low_complexity Low_complexity 1 21 0 5 680 27 0 0 0 chr2L 12557986 12558013 -10453531 + AT_rich Low_complexity Low_complexity 1 27 0 5 680 2298 4 0 4 chr2L 12558374 12558641 -10452903 - DMLTR5 LTR Gypsy 0 266 1 5 680 48405 1 0 1 chr2L 12558641 12564207 -10447337 - HMSBEAGLE_I LTR Gypsy 0 6529 969 5 680 974 29 52 12 chr2L 12564207 12564379 -10447165 + (TAA)n Simple_repeat Simple_repeat 1 179 0 5 680 6542 0 0 0 chr2L 12564393 12565180 -10446364 - HMSBEAGLE_I LTR Gypsy -5742 787 1 5 680 2298 4 0 4 chr2L 12565179 12565446 -10446098 - DMLTR5 LTR Gypsy 0 266 1 5 680 22 35 0 0 chr2L 12566418 12566447 -10445097 + AT_rich Low_complexity Low_complexity 1 29 0 5 680 27 0 0 0 chr2L 12566478 12566505 -10445039 + AT_rich Low_complexity Low_complexity 1 27 0 5 680 231 88 0 0 chr2L 12566631 12566665 -10444879 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 680 234 0 0 0 chr2L 12568034 12568060 -10443484 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 680 22 70 0 0 chr2L 12569496 12569539 -10442005 + AT_rich Low_complexity Low_complexity 1 43 0 5 680 183 80 0 0 chr2L 12573124 12573149 -10438395 + (CATA)n Simple_repeat Simple_repeat 4 28 0 5 680 24 0 0 0 chr2L 12573359 12573383 -10438161 + AT_rich Low_complexity Low_complexity 1 24 0 5 680 24 67 0 0 chr2L 12573821 12573866 -10437678 + AT_rich Low_complexity Low_complexity 1 45 0 5 680 219 169 0 78 chr2L 12573938 12574002 -10437542 + A-rich Low_complexity Low_complexity 2 60 0 5 680 183 139 0 0 chr2L 12574109 12574145 -10437399 + (TTG)n Simple_repeat Simple_repeat 1 36 0 5 680 35 0 0 0 chr2L 12574841 12574876 -10436668 + AT_rich Low_complexity Low_complexity 1 35 0 5 680 48 88 0 0 chr2L 12575919 12576044 -10435500 + AT_rich Low_complexity Low_complexity 1 125 0 5 680 192 40 0 0 chr2L 12577077 12577102 -10434442 + (ATG)n Simple_repeat Simple_repeat 1 25 0 5 680 264 333 10 20 chr2L 12578776 12578874 -10432670 + G-rich Low_complexity Low_complexity 3 99 0 5 680 24 0 0 0 chr2L 12579053 12579077 -10432467 + AT_rich Low_complexity Low_complexity 1 24 0 5 680 198 0 0 0 chr2L 12580834 12580856 -10430688 + (T)n Simple_repeat Simple_repeat 1 22 0 5 681 26 30 0 0 chr2L 12583536 12583569 -10427975 + AT_rich Low_complexity Low_complexity 1 33 0 5 681 24 32 0 0 chr2L 12583705 12583736 -10427808 + AT_rich Low_complexity Low_complexity 1 31 0 5 681 24 32 0 0 chr2L 12584500 12584531 -10427013 + AT_rich Low_complexity Low_complexity 1 31 0 5 681 203 139 47 0 chr2L 12585679 12585722 -10425822 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5 681 21 36 0 0 chr2L 12585756 12585784 -10425760 + AT_rich Low_complexity Low_complexity 1 28 0 5 681 213 127 71 18 chr2L 12592714 12592770 -10418774 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 5 681 21 36 0 0 chr2L 12593489 12593517 -10418027 + AT_rich Low_complexity Low_complexity 1 28 0 5 681 239 194 28 0 chr2L 12593902 12593974 -10417570 + ROO_I LTR Pao 652 725 -7531 5 681 288 238 0 28 chr2L 12594106 12594214 -10417330 + ROO_I LTR Pao 639 743 -7513 5 681 188 67 0 32 chr2L 12594314 12594345 -10417199 + (CAG)n Simple_repeat Simple_repeat 3 32 0 5 681 352 353 0 0 chr2L 12594470 12594651 -10416893 + (CAG)n Simple_repeat Simple_repeat 1 181 0 5 681 22 0 0 0 chr2L 12597167 12597189 -10414355 + AT_rich Low_complexity Low_complexity 1 22 0 5 681 192 152 0 0 chr2L 12598629 12598662 -10412882 + (CTG)n Simple_repeat Simple_repeat 2 34 0 5 681 29 0 0 0 chr2L 12600195 12600224 -10411320 + AT_rich Low_complexity Low_complexity 1 29 0 5 681 25 0 0 0 chr2L 12600331 12600356 -10411188 + AT_rich Low_complexity Low_complexity 1 25 0 5 681 220 120 0 39 chr2L 12606051 12606103 -10405441 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 5 681 23 33 0 0 chr2L 12607843 12607873 -10403671 + AT_rich Low_complexity Low_complexity 1 30 0 5 681 231 36 0 0 chr2L 12608553 12608581 -10402963 + (CCGAA)n Simple_repeat Simple_repeat 1 28 0 5 681 195 114 0 0 chr2L 12609035 12609070 -10402474 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 5 681 180 0 0 0 chr2L 12611513 12611533 -10400011 + (A)n Simple_repeat Simple_repeat 1 20 0 5 681 228 149 0 0 chr2L 12618458 12618505 -10393039 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 681 23 33 0 0 chr2L 12621497 12621527 -10390017 + AT_rich Low_complexity Low_complexity 1 30 0 5 681 204 40 0 0 chr2L 12623887 12623912 -10387632 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 681 21 36 0 0 chr2L 12627327 12627355 -10384189 + AT_rich Low_complexity Low_complexity 1 28 0 5 681 25 0 0 0 chr2L 12632155 12632180 -10379364 + AT_rich Low_complexity Low_complexity 1 25 0 5 681 31 58 0 0 chr2L 12632301 12632353 -10379191 + AT_rich Low_complexity Low_complexity 1 52 0 5 681 309 109 0 0 chr2L 12635847 12635893 -10375651 + (AGTTG)n Simple_repeat Simple_repeat 4 49 0 5 681 22 70 0 0 chr2L 12636371 12636414 -10375130 + AT_rich Low_complexity Low_complexity 1 43 0 5 681 240 100 0 0 chr2L 12639744 12639784 -10371760 + (T)n Simple_repeat Simple_repeat 1 40 0 5 681 32 43 0 0 chr2L 12640760 12640806 -10370738 + AT_rich Low_complexity Low_complexity 1 46 0 5 681 35 24 0 0 chr2L 12640963 12641005 -10370539 + AT_rich Low_complexity Low_complexity 1 42 0 5 681 23 33 0 0 chr2L 12643075 12643105 -10368439 + AT_rich Low_complexity Low_complexity 1 30 0 5 681 35 54 0 0 chr2L 12643155 12643211 -10368333 + AT_rich Low_complexity Low_complexity 1 56 0 5 681 24 67 0 0 chr2L 12644405 12644450 -10367094 + AT_rich Low_complexity Low_complexity 1 45 0 5 681 24 67 0 0 chr2L 12646288 12646333 -10365211 + AT_rich Low_complexity Low_complexity 1 45 0 5 681 207 0 0 0 chr2L 12647041 12647064 -10364480 + (T)n Simple_repeat Simple_repeat 1 23 0 5 681 22 0 0 0 chr2L 12652734 12652756 -10358788 + AT_rich Low_complexity Low_complexity 1 22 0 5 681 21 36 0 0 chr2L 12653616 12653644 -10357900 + AT_rich Low_complexity Low_complexity 1 28 0 5 681 26 30 0 0 chr2L 12654169 12654202 -10357342 + AT_rich Low_complexity Low_complexity 1 33 0 5 681 25 31 0 0 chr2L 12656268 12656300 -10355244 + AT_rich Low_complexity Low_complexity 1 32 0 5 681 21 0 0 0 chr2L 12656431 12656452 -10355092 + AT_rich Low_complexity Low_complexity 1 21 0 5 681 28 48 0 0 chr2L 12656996 12657038 -10354506 + AT_rich Low_complexity Low_complexity 1 42 0 5 681 26 0 0 0 chr2L 12657149 12657175 -10354369 + AT_rich Low_complexity Low_complexity 1 26 0 5 681 246 234 0 13 chr2L 12657566 12657644 -10353900 + (CA)n Simple_repeat Simple_repeat 1 77 0 5 681 234 156 0 0 chr2L 12660417 12660462 -10351082 + (CAG)n Simple_repeat Simple_repeat 3 47 0 5 681 366 162 0 0 chr2L 12660523 12660597 -10350947 + (CAG)n Simple_repeat Simple_repeat 1 74 0 5 681 22 35 0 0 chr2L 12662458 12662487 -10349057 + AT_rich Low_complexity Low_complexity 1 29 0 5 681 21 36 0 0 chr2L 12664165 12664193 -10347351 + AT_rich Low_complexity Low_complexity 1 28 0 5 681 21 0 0 0 chr2L 12664688 12664709 -10346835 + AT_rich Low_complexity Low_complexity 1 21 0 5 681 32 26 0 0 chr2L 12664758 12664797 -10346747 + AT_rich Low_complexity Low_complexity 1 39 0 5 681 216 188 0 0 chr2L 12669688 12669736 -10341808 + T-rich Low_complexity Low_complexity 1 48 0 5 681 22 0 0 0 chr2L 12669829 12669851 -10341693 + AT_rich Low_complexity Low_complexity 1 22 0 5 681 22 35 0 0 chr2L 12674870 12674899 -10336645 + AT_rich Low_complexity Low_complexity 1 29 0 5 681 207 0 0 0 chr2L 12676724 12676747 -10334797 + (CAG)n Simple_repeat Simple_repeat 1 23 0 5 681 54 49 0 0 chr2L 12676962 12677044 -10334500 + AT_rich Low_complexity Low_complexity 1 82 0 5 681 23 54 0 0 chr2L 12678751 12678788 -10332756 + AT_rich Low_complexity Low_complexity 1 37 0 5 681 21 0 0 0 chr2L 12679106 12679127 -10332417 + AT_rich Low_complexity Low_complexity 1 21 0 5 681 21 0 0 0 chr2L 12684265 12684286 -10327258 + AT_rich Low_complexity Low_complexity 1 21 0 5 681 21 0 0 0 chr2L 12686292 12686313 -10325231 + AT_rich Low_complexity Low_complexity 1 21 0 5 681 33 25 0 0 chr2L 12686417 12686457 -10325087 + AT_rich Low_complexity Low_complexity 1 40 0 5 681 21 36 0 0 chr2L 12695714 12695742 -10315802 + AT_rich Low_complexity Low_complexity 1 28 0 5 681 21 36 0 0 chr2L 12695755 12695783 -10315761 + AT_rich Low_complexity Low_complexity 1 28 0 5 681 28 29 0 0 chr2L 12700859 12700894 -10310650 + AT_rich Low_complexity Low_complexity 1 35 0 5 681 22 88 0 0 chr2L 12704574 12704631 -10306913 + AT_rich Low_complexity Low_complexity 1 57 0 5 681 269 278 0 0 chr2L 12710990 12711062 -10300482 + (CCG)n Simple_repeat Simple_repeat 1 72 0 5 681 320 400 0 0 chr2L 12712009 12712184 -10299360 + (CCG)n Simple_repeat Simple_repeat 1 175 0 5 681 206 205 0 0 chr2L 12712202 12712241 -10299303 + (CCG)n Simple_repeat Simple_repeat 1 39 0 5 681 28 0 0 0 chr2L 12712581 12712609 -10298935 + AT_rich Low_complexity Low_complexity 1 28 0 5 682 27 62 0 0 chr2L 12728427 12728475 -10283069 + AT_rich Low_complexity Low_complexity 1 48 0 5 682 1711 0 0 0 chr2L 12728974 12729160 -10282384 - POGON1 DNA Pogo 0 186 1 5 682 43104 3 0 0 chr2L 12731127 12735818 -10275726 + FW_DM LINE Jockey 1 4691 -1 5 682 43577 1 0 0 chr2L 12739228 12743947 -10267597 - DOC LINE Jockey -4 4721 4 5 682 29 28 0 0 chr2L 12750187 12750223 -10261321 + AT_rich Low_complexity Low_complexity 1 36 0 5 682 24 0 0 0 chr2L 12751156 12751180 -10260364 + AT_rich Low_complexity Low_complexity 1 24 0 5 682 204 163 23 0 chr2L 12751730 12751773 -10259771 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 682 180 0 0 0 chr2L 12751862 12751882 -10259662 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 5 682 214 297 0 15 chr2L 12752484 12752549 -10258995 + G-rich Low_complexity Low_complexity 2 65 0 5 682 236 139 47 0 chr2L 12753458 12753501 -10258043 + DNAREP1_DM LINE Penelope 17 61 -533 5 682 477 201 167 61 chr2L 12753501 12753681 -10257863 + DNAREP1_DM LINE Penelope 386 584 -10 5 682 22 56 0 0 chr2L 12753770 12753806 -10257738 + AT_rich Low_complexity Low_complexity 1 36 0 5 682 219 240 0 20 chr2L 12754764 12754815 -10256729 + (TTCCG)n Simple_repeat Simple_repeat 4 53 0 5 682 210 71 0 0 chr2L 12754815 12754843 -10256701 + (CAGTT)n Simple_repeat Simple_repeat 4 31 0 5 682 32 57 0 0 chr2L 12757021 12757074 -10254470 + AT_rich Low_complexity Low_complexity 1 53 0 5 682 40 0 0 0 chr2L 12762859 12762899 -10248645 + AT_rich Low_complexity Low_complexity 1 40 0 5 682 234 0 0 0 chr2L 12763836 12763862 -10247682 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 682 1103 15 0 14 chr2L 12763894 12764032 -10247512 + BS LINE Jockey 4991 5126 0 5 682 210 105 0 0 chr2L 12765661 12765699 -10245845 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 682 24 0 0 0 chr2L 12767475 12767499 -10244045 + AT_rich Low_complexity Low_complexity 1 24 0 5 682 202 218 18 0 chr2L 12768258 12768313 -10243231 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 682 213 81 54 0 chr2L 12770049 12770086 -10241458 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 5 682 180 0 0 0 chr2L 12770584 12770604 -10240940 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 682 28 48 0 0 chr2L 12771966 12772008 -10239536 + AT_rich Low_complexity Low_complexity 1 42 0 5 682 23 33 0 0 chr2L 12772201 12772231 -10239313 + AT_rich Low_complexity Low_complexity 1 30 0 5 682 227 271 24 0 chr2L 12772636 12772721 -10238823 + (CACTT)n Simple_repeat Simple_repeat 4 90 0 5 682 32 43 0 0 chr2L 12773385 12773431 -10238113 + AT_rich Low_complexity Low_complexity 1 46 0 5 682 30 27 0 0 chr2L 12773946 12773983 -10237561 + AT_rich Low_complexity Low_complexity 1 37 0 5 682 21 0 0 0 chr2L 12775559 12775580 -10235964 + AT_rich Low_complexity Low_complexity 1 21 0 5 682 22 0 0 0 chr2L 12777419 12777441 -10234103 + AT_rich Low_complexity Low_complexity 1 22 0 5 682 180 0 0 0 chr2L 12779973 12779993 -10231551 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 682 256 212 0 15 chr2L 12780880 12780947 -10230597 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 682 5654 3 0 0 chr2L 12781858 12782516 -10229028 - QUASIMODO_LTR LTR Gypsy 0 658 1 5 682 50502 3 1 2 chr2L 12782516 12788586 -10222958 - QUASIMODO_I LTR Gypsy 0 6060 1 5 682 5654 3 0 0 chr2L 12788586 12789244 -10222300 - QUASIMODO_LTR LTR Gypsy 0 658 1 5 682 25 0 0 0 chr2L 12789551 12789576 -10221968 + AT_rich Low_complexity Low_complexity 1 25 0 5 682 28 0 0 0 chr2L 12790356 12790384 -10221160 + AT_rich Low_complexity Low_complexity 1 28 0 5 682 31179 1 0 0 chr2L 12791662 12795275 -10216269 - FW_DM LINE Jockey 0 4692 1080 5 682 231 36 0 0 chr2L 12795819 12795847 -10215697 + (TC)n Simple_repeat Simple_repeat 2 29 0 5 682 22 70 0 0 chr2L 12796097 12796140 -10215404 + AT_rich Low_complexity Low_complexity 1 43 0 5 682 189 94 0 0 chr2L 12796638 12796670 -10214874 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 682 226 262 0 0 chr2L 12798099 12798160 -10213384 + CT-rich Low_complexity Low_complexity 1 61 0 5 682 203 267 0 0 chr2L 12798623 12798683 -10212861 + A-rich Low_complexity Low_complexity 1 60 0 5 682 23 0 0 0 chr2L 12798938 12798961 -10212583 + AT_rich Low_complexity Low_complexity 1 23 0 5 682 194 81 0 26 chr2L 12799339 12799377 -10212167 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 682 330 80 0 0 chr2L 12801235 12801285 -10210259 + (CTG)n Simple_repeat Simple_repeat 3 52 0 5 682 25 31 0 0 chr2L 12802142 12802174 -10209370 + AT_rich Low_complexity Low_complexity 1 32 0 5 682 21 0 0 0 chr2L 12803118 12803139 -10208405 + AT_rich Low_complexity Low_complexity 1 21 0 5 682 21 0 0 0 chr2L 12803898 12803919 -10207625 + AT_rich Low_complexity Low_complexity 1 21 0 5 682 31 0 0 0 chr2L 12805692 12805723 -10205821 + AT_rich Low_complexity Low_complexity 1 31 0 5 682 27 0 0 0 chr2L 12807222 12807249 -10204295 + AT_rich Low_complexity Low_complexity 1 27 0 5 682 186 87 43 21 chr2L 12807619 12807666 -10203878 + T-rich Low_complexity Low_complexity 2 49 0 5 682 201 39 0 0 chr2L 12807826 12807852 -10203692 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 682 185 159 0 22 chr2L 12812201 12812246 -10199298 + (GAATG)n Simple_repeat Simple_repeat 2 45 0 5 682 22 35 0 0 chr2L 12814061 12814090 -10197454 + AT_rich Low_complexity Low_complexity 1 29 0 5 682 186 103 0 0 chr2L 12814340 12814369 -10197175 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 682 183 80 0 0 chr2L 12815074 12815099 -10196445 + (GCTTG)n Simple_repeat Simple_repeat 4 28 0 5 682 36 23 0 0 chr2L 12815365 12815408 -10196136 + AT_rich Low_complexity Low_complexity 1 43 0 5 682 24 53 0 0 chr2L 12815494 12815532 -10196012 + AT_rich Low_complexity Low_complexity 1 38 0 5 682 21 57 0 0 chr2L 12817009 12817044 -10194500 + AT_rich Low_complexity Low_complexity 1 35 0 5 682 209 98 24 0 chr2L 12817314 12817355 -10194189 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 682 237 65 0 0 chr2L 12817607 12817638 -10193906 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 682 180 254 0 0 chr2L 12818454 12818513 -10193031 + (CATATA)n Simple_repeat Simple_repeat 5 63 0 5 682 198 67 21 43 chr2L 12818650 12818697 -10192847 + (TTTAG)n Simple_repeat Simple_repeat 4 49 0 5 682 27 0 0 0 chr2L 12818912 12818939 -10192605 + AT_rich Low_complexity Low_complexity 1 27 0 5 682 213 235 0 0 chr2L 12822192 12822243 -10189301 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 682 41 48 0 0 chr2L 12823725 12823787 -10187757 + AT_rich Low_complexity Low_complexity 1 62 0 5 682 234 62 0 0 chr2L 12824690 12824722 -10186822 + (A)n Simple_repeat Simple_repeat 1 32 0 5 682 228 163 0 0 chr2L 12828928 12828971 -10182573 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 5 682 210 139 0 0 chr2L 12829020 12829056 -10182488 + (CCGAA)n Simple_repeat Simple_repeat 2 37 0 5 682 30 45 0 0 chr2L 12829264 12829308 -10182236 + AT_rich Low_complexity Low_complexity 1 44 0 5 682 228 204 37 0 chr2L 12831239 12831293 -10180251 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 5 682 224 319 11 0 chr2L 12833428 12833519 -10178025 + CT-rich Low_complexity Low_complexity 2 93 0 5 682 22 35 0 0 chr2L 12834539 12834568 -10176976 + AT_rich Low_complexity Low_complexity 1 29 0 5 682 36 23 0 0 chr2L 12835680 12835723 -10175821 + AT_rich Low_complexity Low_complexity 1 43 0 5 682 26 64 0 0 chr2L 12837463 12837510 -10174034 + AT_rich Low_complexity Low_complexity 1 47 0 5 682 21 36 0 0 chr2L 12838479 12838507 -10173037 + AT_rich Low_complexity Low_complexity 1 28 0 5 682 28 29 0 0 chr2L 12839251 12839286 -10172258 + AT_rich Low_complexity Low_complexity 1 35 0 5 682 231 172 0 79 chr2L 12843630 12843693 -10167851 - ROO_I LTR Pao -7520 736 679 5 682 41 0 0 0 chr2L 12843992 12844033 -10167511 + AT_rich Low_complexity Low_complexity 1 41 0 5 682 198 0 0 0 chr2L 12844891 12844913 -10166631 + (CGGA)n Simple_repeat Simple_repeat 3 24 0 5 683 213 154 0 0 chr2L 12845797 12845836 -10165708 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 683 180 125 0 0 chr2L 12847599 12847631 -10163913 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 683 24 0 0 0 chr2L 12849014 12849038 -10162506 + AT_rich Low_complexity Low_complexity 1 24 0 5 683 21 36 0 0 chr2L 12849624 12849652 -10161892 + AT_rich Low_complexity Low_complexity 1 28 0 5 683 189 0 0 0 chr2L 12849844 12849865 -10161679 + (C)n Simple_repeat Simple_repeat 1 21 0 5 683 23 0 0 0 chr2L 12850917 12850940 -10160604 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 44 0 0 0 chr2L 12851981 12852025 -10159519 + AT_rich Low_complexity Low_complexity 1 44 0 5 683 222 37 0 0 chr2L 12852626 12852653 -10158891 + (CAGC)n Simple_repeat Simple_repeat 2 28 0 5 683 216 170 0 0 chr2L 12854862 12854915 -10156629 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 683 24 32 0 0 chr2L 12854979 12855010 -10156534 + AT_rich Low_complexity Low_complexity 1 31 0 5 683 22 0 0 0 chr2L 12855167 12855189 -10156355 + AT_rich Low_complexity Low_complexity 1 22 0 5 683 23 0 0 0 chr2L 12855686 12855709 -10155835 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 28 48 0 0 chr2L 12857081 12857123 -10154421 + AT_rich Low_complexity Low_complexity 1 42 0 5 683 230 254 0 0 chr2L 12857971 12858034 -10153510 + T-rich Low_complexity Low_complexity 1 63 0 5 683 35 0 0 0 chr2L 12858257 12858292 -10153252 + AT_rich Low_complexity Low_complexity 1 35 0 5 683 8492 1 0 0 chr2L 12861752 12862656 -10148888 + HOBO DNA hAT 1 904 -2112 5 683 4649 2 2 10 chr2L 12862648 12863158 -10148386 + HOBO DNA hAT 2511 3016 0 5 683 21 36 0 0 chr2L 12863385 12863413 -10148131 + AT_rich Low_complexity Low_complexity 1 28 0 5 683 200 205 0 0 chr2L 12864520 12864559 -10146985 + (CTG)n Simple_repeat Simple_repeat 2 40 0 5 683 212 250 0 0 chr2L 12864747 12864799 -10146745 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 683 44 63 0 0 chr2L 12866801 12866880 -10144664 + AT_rich Low_complexity Low_complexity 1 79 0 5 683 264 59 0 0 chr2L 12867168 12867202 -10144342 + (GAGTG)n Simple_repeat Simple_repeat 3 36 0 5 683 25 83 0 0 chr2L 12867655 12867715 -10143829 + AT_rich Low_complexity Low_complexity 1 60 0 6 683 37 39 0 0 chr2L 12874438 12874489 -10137055 + AT_rich Low_complexity Low_complexity 1 51 0 6 683 247 250 0 0 chr2L 12875937 12875993 -10135551 + (CTG)n Simple_repeat Simple_repeat 2 57 0 6 683 205 245 0 0 chr2L 12876822 12876875 -10134669 + (CTG)n Simple_repeat Simple_repeat 1 53 0 6 683 219 36 0 0 chr2L 12878683 12878711 -10132833 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 683 22 56 0 0 chr2L 12878904 12878940 -10132604 + AT_rich Low_complexity Low_complexity 1 36 0 6 683 180 152 0 0 chr2L 12883416 12883449 -10128095 + (CAG)n Simple_repeat Simple_repeat 1 33 0 6 683 210 118 0 0 chr2L 12884150 12884184 -10127360 + (CTG)n Simple_repeat Simple_repeat 1 34 0 6 683 22 0 0 0 chr2L 12884525 12884547 -10126997 + AT_rich Low_complexity Low_complexity 1 22 0 6 683 28 29 0 0 chr2L 12884837 12884872 -10126672 + AT_rich Low_complexity Low_complexity 1 35 0 6 683 186 103 0 0 chr2L 12886263 12886292 -10125252 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 683 23 86 0 0 chr2L 12886799 12886857 -10124687 + AT_rich Low_complexity Low_complexity 1 58 0 6 683 22 0 0 0 chr2L 12887519 12887541 -10124003 + AT_rich Low_complexity Low_complexity 1 22 0 6 683 220 267 0 0 chr2L 12889245 12889305 -10122239 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 683 23 33 0 0 chr2L 12889749 12889779 -10121765 + AT_rich Low_complexity Low_complexity 1 30 0 6 683 303 104 0 0 chr2L 12891299 12891347 -10120197 + (CAG)n Simple_repeat Simple_repeat 2 49 0 6 683 183 42 0 0 chr2L 12893106 12893130 -10118414 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 683 225 0 0 0 chr2L 12893285 12893310 -10118234 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 683 8492 1 0 0 chr2L 12894075 12894979 -10116565 + HOBO DNA hAT 1 904 -2112 6 683 4649 2 2 10 chr2L 12894971 12895481 -10116063 + HOBO DNA hAT 2511 3016 0 6 683 186 150 0 0 chr2L 12897400 12897440 -10114104 + (T)n Simple_repeat Simple_repeat 1 40 0 6 683 180 152 0 0 chr2L 12898586 12898619 -10112925 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 6 683 372 125 0 0 chr2L 12899437 12899501 -10112043 + (CAG)n Simple_repeat Simple_repeat 1 64 0 6 683 22 56 0 0 chr2L 12900742 12900778 -10110766 + AT_rich Low_complexity Low_complexity 1 36 0 6 683 21 36 0 0 chr2L 12901274 12901302 -10110242 + AT_rich Low_complexity Low_complexity 1 28 0 6 683 21 0 0 0 chr2L 12902813 12902834 -10108710 + AT_rich Low_complexity Low_complexity 1 21 0 6 683 236 100 0 24 chr2L 12903683 12903724 -10107820 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 683 22 35 0 0 chr2L 12904098 12904127 -10107417 + AT_rich Low_complexity Low_complexity 1 29 0 6 683 216 167 0 0 chr2L 12904704 12904752 -10106792 + A-rich Low_complexity Low_complexity 1 48 0 6 683 226 208 0 0 chr2L 12907769 12907817 -10103727 + GA-rich Low_complexity Low_complexity 3 50 0 6 683 189 195 0 0 chr2L 12908040 12908081 -10103463 + A-rich Low_complexity Low_complexity 1 41 0 6 683 24 32 0 0 chr2L 12909735 12909766 -10101778 + AT_rich Low_complexity Low_complexity 1 31 0 6 683 31 68 0 0 chr2L 12910847 12910906 -10100638 + AT_rich Low_complexity Low_complexity 1 59 0 6 683 26 0 0 0 chr2L 12923727 12923753 -10087791 + AT_rich Low_complexity Low_complexity 1 26 0 6 683 327 49 0 0 chr2L 12931775 12931816 -10079728 + (CAAAC)n Simple_repeat Simple_repeat 3 43 0 6 683 243 0 0 0 chr2L 12932123 12932150 -10079394 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 683 305 117 0 16 chr2L 12933498 12933559 -10077985 + (CTG)n Simple_repeat Simple_repeat 3 62 0 6 683 3747 2 0 0 chr2L 12933904 12934303 -10077241 - BLOOD_LTR LTR Gypsy 0 399 1 6 683 60587 0 0 0 chr2L 12934303 12940915 -10070629 - BLOOD_I LTR Gypsy 0 6613 1 6 683 3747 2 0 0 chr2L 12940915 12941314 -10070230 - BLOOD_LTR LTR Gypsy 0 399 1 6 683 27 0 0 0 chr2L 12942780 12942807 -10068737 + AT_rich Low_complexity Low_complexity 1 27 0 6 683 25 31 0 0 chr2L 12944350 12944382 -10067162 + AT_rich Low_complexity Low_complexity 1 32 0 6 683 26 50 0 0 chr2L 12945026 12945066 -10066478 + AT_rich Low_complexity Low_complexity 1 40 0 6 683 25 65 0 0 chr2L 12946955 12947001 -10064543 + AT_rich Low_complexity Low_complexity 1 46 0 6 683 21 0 0 0 chr2L 12948337 12948358 -10063186 + AT_rich Low_complexity Low_complexity 1 21 0 6 683 35 78 0 0 chr2L 12950822 12950899 -10060645 + AT_rich Low_complexity Low_complexity 1 77 0 6 683 180 0 0 0 chr2L 12958328 12958348 -10053196 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 683 186 43 0 0 chr2L 12958398 12958421 -10053123 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 683 192 40 0 0 chr2L 12959114 12959139 -10052405 + (ATTTG)n Simple_repeat Simple_repeat 3 27 0 6 683 201 39 0 0 chr2L 12959756 12959782 -10051762 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 683 203 61 30 0 chr2L 12962243 12962276 -10049268 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 683 21 0 0 0 chr2L 12962921 12962942 -10048602 + AT_rich Low_complexity Low_complexity 1 21 0 6 683 189 0 0 0 chr2L 12965240 12965261 -10046283 + (A)n Simple_repeat Simple_repeat 1 21 0 6 683 189 74 0 0 chr2L 12968544 12968571 -10042973 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 683 21 0 0 0 chr2L 12971722 12971743 -10039801 + AT_rich Low_complexity Low_complexity 1 21 0 6 683 251 104 0 20 chr2L 12971769 12971818 -10039726 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 683 180 158 0 0 chr2L 12972779 12972817 -10038727 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 683 22 35 0 0 chr2L 12973281 12973310 -10038234 + AT_rich Low_complexity Low_complexity 1 29 0 6 683 21 0 0 0 chr2L 12975361 12975382 -10036162 + AT_rich Low_complexity Low_complexity 1 21 0 6 683 24 0 0 0 chr2L 12975932 12975956 -10035588 + AT_rich Low_complexity Low_complexity 1 24 0 6 683 23 0 0 0 chr2L 12976006 12976029 -10035515 + AT_rich Low_complexity Low_complexity 1 23 0 6 684 24 0 0 0 chr2L 12985265 12985289 -10026255 + AT_rich Low_complexity Low_complexity 1 24 0 6 684 180 77 0 0 chr2L 12985860 12985886 -10025658 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 684 24 53 0 0 chr2L 12986665 12986703 -10024841 + AT_rich Low_complexity Low_complexity 1 38 0 6 684 29 0 0 0 chr2L 12986827 12986856 -10024688 + AT_rich Low_complexity Low_complexity 1 29 0 6 684 375 136 15 0 chr2L 12986940 12987006 -10024538 - HOBO DNA hAT 0 3016 2950 6 684 666 97 8 137 chr2L 12987089 12987220 -10024324 - HOBO DNA hAT -2900 116 3 6 684 22 56 0 0 chr2L 12987644 12987680 -10023864 + AT_rich Low_complexity Low_complexity 1 36 0 6 684 24 53 0 0 chr2L 12988911 12988949 -10022595 + AT_rich Low_complexity Low_complexity 1 38 0 6 684 32 0 0 0 chr2L 12993388 12993420 -10018124 + AT_rich Low_complexity Low_complexity 1 32 0 6 684 205 184 0 0 chr2L 12996207 12996245 -10015299 + A-rich Low_complexity Low_complexity 2 39 0 6 684 201 74 0 0 chr2L 12998835 12998862 -10012682 + (CATTT)n Simple_repeat Simple_repeat 1 27 0 6 684 210 222 0 31 chr2L 13001046 13001111 -10010433 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 684 254 357 0 13 chr2L 13003342 13003498 -10008046 + GA-rich Low_complexity Low_complexity 1 154 0 6 684 29 28 0 0 chr2L 13004373 13004409 -10007135 + AT_rich Low_complexity Low_complexity 1 36 0 6 684 22 56 0 0 chr2L 13007087 13007123 -10004421 + AT_rich Low_complexity Low_complexity 1 36 0 6 684 23 0 0 0 chr2L 13013074 13013097 -9998447 + AT_rich Low_complexity Low_complexity 1 23 0 6 684 21 36 0 0 chr2L 13021505 13021533 -9990011 + AT_rich Low_complexity Low_complexity 1 28 0 6 684 185 108 0 26 chr2L 13022577 13022615 -9988929 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 684 218 57 0 54 chr2L 13023622 13023659 -9987885 + (CTG)n Simple_repeat Simple_repeat 3 37 0 6 684 273 265 24 0 chr2L 13025565 13025648 -9985896 + (TG)n Simple_repeat Simple_repeat 1 85 0 6 684 186 118 0 0 chr2L 13025753 13025787 -9985757 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 6 684 31 68 0 0 chr2L 13026223 13026282 -9985262 + AT_rich Low_complexity Low_complexity 1 59 0 6 684 203 133 0 0 chr2L 13026819 13026849 -9984695 + (CGA)n Simple_repeat Simple_repeat 1 30 0 6 684 218 175 0 0 chr2L 13027966 13028006 -9983538 + (CTG)n Simple_repeat Simple_repeat 3 42 0 6 684 30 0 0 0 chr2L 13028778 13028808 -9982736 + AT_rich Low_complexity Low_complexity 1 30 0 6 684 183 129 0 0 chr2L 13031036 13031067 -9980477 + (CTG)n Simple_repeat Simple_repeat 3 33 0 6 684 212 211 0 19 chr2L 13033509 13033562 -9977982 + (TTG)n Simple_repeat Simple_repeat 1 52 0 6 684 928 25 1 17 chr2L 13036296 13036480 -9975064 + BS2 LINE Jockey 4481 4721 0 6 684 211 217 0 0 chr2L 13037148 13037194 -9974350 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 684 383 62 0 59 chr2L 13042553 13042621 -9968923 + (CAG)n Simple_repeat Simple_repeat 2 65 0 6 684 21 0 0 0 chr2L 13043437 13043458 -9968086 + AT_rich Low_complexity Low_complexity 1 21 0 6 684 189 0 0 0 chr2L 13044233 13044254 -9967290 + (CAG)n Simple_repeat Simple_repeat 3 23 0 6 684 316 111 0 31 chr2L 13044283 13044348 -9967196 + (CAG)n Simple_repeat Simple_repeat 3 65 0 6 684 27 29 0 0 chr2L 13044637 13044671 -9966873 + AT_rich Low_complexity Low_complexity 1 34 0 6 684 26 82 0 0 chr2L 13044806 13044867 -9966677 + AT_rich Low_complexity Low_complexity 1 61 0 6 684 29 28 0 0 chr2L 13046540 13046576 -9964968 + AT_rich Low_complexity Low_complexity 1 36 0 6 684 192 158 0 0 chr2L 13050535 13050573 -9960971 + (ATTG)n Simple_repeat Simple_repeat 3 40 0 6 684 25 31 0 0 chr2L 13057278 13057310 -9954234 + AT_rich Low_complexity Low_complexity 1 32 0 6 684 27 81 0 0 chr2L 13058829 13058891 -9952653 + AT_rich Low_complexity Low_complexity 1 62 0 6 684 21 57 0 0 chr2L 13060892 13060927 -9950617 + AT_rich Low_complexity Low_complexity 1 35 0 6 684 25 0 0 0 chr2L 13062841 13062866 -9948678 + AT_rich Low_complexity Low_complexity 1 25 0 6 684 195 42 0 0 chr2L 13065141 13065165 -9946379 + (TCG)n Simple_repeat Simple_repeat 1 24 0 6 684 234 91 0 0 chr2L 13067062 13067095 -9944449 + (CTG)n Simple_repeat Simple_repeat 1 33 0 6 684 220 191 0 0 chr2L 13069623 13069670 -9941874 + (CAT)n Simple_repeat Simple_repeat 2 48 0 6 684 219 88 0 0 chr2L 13069670 13069704 -9941840 + (CAACT)n Simple_repeat Simple_repeat 4 37 0 6 684 229 204 20 0 chr2L 13069863 13069912 -9941632 + (CGAAA)n Simple_repeat Simple_repeat 4 53 0 6 684 21 57 0 0 chr2L 13070398 13070433 -9941111 + AT_rich Low_complexity Low_complexity 1 35 0 6 684 234 125 0 0 chr2L 13071066 13071114 -9940430 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 684 227 195 0 0 chr2L 13071766 13071807 -9939737 + (ATG)n Simple_repeat Simple_repeat 3 43 0 6 684 186 103 0 0 chr2L 13074176 13074205 -9937339 + (TTTTC)n Simple_repeat Simple_repeat 3 31 0 6 684 209 119 24 0 chr2L 13074301 13074343 -9937201 + (AGTTG)n Simple_repeat Simple_repeat 4 46 0 6 684 249 246 0 0 chr2L 13074930 13074995 -9936549 + (CTG)n Simple_repeat Simple_repeat 1 65 0 6 684 26 88 0 0 chr2L 13075166 13075234 -9936310 + AT_rich Low_complexity Low_complexity 1 68 0 6 684 22 0 0 0 chr2L 13077008 13077030 -9934514 + AT_rich Low_complexity Low_complexity 1 22 0 6 684 185 0 40 0 chr2L 13078617 13078642 -9932902 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 684 195 42 0 0 chr2L 13079561 13079585 -9931959 + (CTG)n Simple_repeat Simple_repeat 1 24 0 6 684 180 0 0 0 chr2L 13081652 13081672 -9929872 + (CTATA)n Simple_repeat Simple_repeat 1 20 0 6 684 189 0 0 0 chr2L 13083403 13083424 -9928120 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 6 684 183 186 0 0 chr2L 13086527 13086570 -9924974 + (ATG)n Simple_repeat Simple_repeat 2 44 0 6 684 22 0 0 0 chr2L 13089726 13089748 -9921796 + AT_rich Low_complexity Low_complexity 1 22 0 6 684 270 217 0 0 chr2L 13089934 13089994 -9921550 + (CAGAA)n Simple_repeat Simple_repeat 5 64 0 6 684 24 53 0 0 chr2L 13091218 13091256 -9920288 + AT_rich Low_complexity Low_complexity 1 38 0 6 684 21 0 0 0 chr2L 13092126 13092147 -9919397 + AT_rich Low_complexity Low_complexity 1 21 0 6 684 219 125 0 0 chr2L 13093128 13093168 -9918376 + (CTG)n Simple_repeat Simple_repeat 3 42 0 6 684 186 103 0 0 chr2L 13095978 13096007 -9915537 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 6 684 222 204 0 0 chr2L 13097193 13097237 -9914307 + (CCGAA)n Simple_repeat Simple_repeat 3 46 0 6 684 204 279 0 0 chr2L 13098147 13098208 -9913336 + (ATGGTG)n Simple_repeat Simple_repeat 6 66 0 6 684 21 0 0 0 chr2L 13098970 13098991 -9912553 + AT_rich Low_complexity Low_complexity 1 21 0 6 684 32 43 0 0 chr2L 13099092 13099138 -9912406 + AT_rich Low_complexity Low_complexity 1 46 0 6 684 22 35 0 0 chr2L 13102973 13103002 -9908542 + AT_rich Low_complexity Low_complexity 1 29 0 6 684 22 0 0 0 chr2L 13103472 13103494 -9908050 + AT_rich Low_complexity Low_complexity 1 22 0 6 684 21 0 0 0 chr2L 13103824 13103845 -9907699 + AT_rich Low_complexity Low_complexity 1 21 0 6 684 183 42 0 0 chr2L 13104889 13104913 -9906631 + (CAG)n Simple_repeat Simple_repeat 3 26 0 6 684 42 0 0 0 chr2L 13106639 13106681 -9904863 + AT_rich Low_complexity Low_complexity 1 42 0 6 684 22 0 0 0 chr2L 13106956 13106978 -9904566 + AT_rich Low_complexity Low_complexity 1 22 0 6 685 27 29 0 0 chr2L 13110176 13110210 -9901334 + AT_rich Low_complexity Low_complexity 1 34 0 6 685 235 211 0 0 chr2L 13110434 13110527 -9901017 + (CACCAT)n Simple_repeat Simple_repeat 1 93 0 6 685 209 100 50 0 chr2L 13114147 13114187 -9897357 + (CATA)n Simple_repeat Simple_repeat 1 42 0 6 685 24 0 0 0 chr2L 13120110 13120134 -9891410 + AT_rich Low_complexity Low_complexity 1 24 0 6 685 277 296 8 25 chr2L 13121754 13121872 -9889672 + (CAG)n Simple_repeat Simple_repeat 1 116 0 6 685 268 164 0 69 chr2L 13121882 13121954 -9889590 + ROO_I LTR Pao 660 726 -7530 6 685 30 0 0 0 chr2L 13123717 13123747 -9887797 + AT_rich Low_complexity Low_complexity 1 30 0 6 685 234 0 0 0 chr2L 13125938 13125964 -9885580 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 685 200 34 0 33 chr2L 13128649 13128679 -9882865 + (TTAAA)n Simple_repeat Simple_repeat 2 30 0 6 685 25 0 0 0 chr2L 13129501 13129526 -9882018 + AT_rich Low_complexity Low_complexity 1 25 0 6 685 24 67 0 0 chr2L 13129600 13129645 -9881899 + AT_rich Low_complexity Low_complexity 1 45 0 6 685 23 33 0 0 chr2L 13130047 13130077 -9881467 + AT_rich Low_complexity Low_complexity 1 30 0 6 685 210 118 0 0 chr2L 13137066 13137100 -9874444 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 6 685 200 122 24 0 chr2L 13137380 13137421 -9874123 + (GATTG)n Simple_repeat Simple_repeat 5 46 0 6 685 215 61 30 0 chr2L 13139018 13139051 -9872493 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 685 419 91 0 0 chr2L 13140366 13140421 -9871123 - DNAREP1_DM LINE Penelope -154 440 386 6 685 213 94 0 0 chr2L 13140832 13140864 -9870680 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 6 685 21 36 0 0 chr2L 13144664 13144692 -9866852 + AT_rich Low_complexity Low_complexity 1 28 0 6 685 38 75 0 0 chr2L 13146391 13146471 -9865073 + AT_rich Low_complexity Low_complexity 1 80 0 6 685 46 0 0 0 chr2L 13147221 13147267 -9864277 + AT_rich Low_complexity Low_complexity 1 46 0 6 685 192 125 0 0 chr2L 13148306 13148338 -9863206 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 685 251 115 39 0 chr2L 13148565 13148617 -9862927 + (ACTG)n Simple_repeat Simple_repeat 1 54 0 6 685 34 42 0 0 chr2L 13148926 13148974 -9862570 + AT_rich Low_complexity Low_complexity 1 48 0 6 685 21 82 0 0 chr2L 13149300 13149349 -9862195 + AT_rich Low_complexity Low_complexity 1 49 0 6 685 21 36 0 0 chr2L 13149725 13149753 -9861791 + AT_rich Low_complexity Low_complexity 1 28 0 6 685 221 305 0 0 chr2L 13150992 13151074 -9860470 + T-rich Low_complexity Low_complexity 1 82 0 6 685 203 193 53 0 chr2L 13154129 13154186 -9857358 + T-rich Low_complexity Low_complexity 2 61 0 6 685 26 50 0 0 chr2L 13155671 13155711 -9855833 + AT_rich Low_complexity Low_complexity 1 40 0 6 685 22 0 0 0 chr2L 13155825 13155847 -9855697 + AT_rich Low_complexity Low_complexity 1 22 0 6 685 290 228 12 12 chr2L 13156484 13156564 -9854980 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 685 32 43 0 0 chr2L 13160219 13160265 -9851279 + AT_rich Low_complexity Low_complexity 1 46 0 6 685 30 59 0 0 chr2L 13160358 13160409 -9851135 + AT_rich Low_complexity Low_complexity 1 51 0 6 685 25 0 0 0 chr2L 13160545 13160570 -9850974 + AT_rich Low_complexity Low_complexity 1 25 0 6 685 24 0 0 0 chr2L 13163147 13163171 -9848373 + AT_rich Low_complexity Low_complexity 1 24 0 6 685 22 0 0 0 chr2L 13164207 13164229 -9847315 + AT_rich Low_complexity Low_complexity 1 22 0 6 685 330 134 0 0 chr2L 13166299 13166366 -9845178 + (GGA)n Simple_repeat Simple_repeat 2 68 0 6 685 266 87 22 0 chr2L 13170318 13170364 -9841180 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 685 24 53 0 0 chr2L 13177037 13177075 -9834469 + AT_rich Low_complexity Low_complexity 1 38 0 6 685 22 0 0 0 chr2L 13187453 13187475 -9824069 + AT_rich Low_complexity Low_complexity 1 22 0 6 685 22 56 0 0 chr2L 13189641 13189677 -9821867 + AT_rich Low_complexity Low_complexity 1 36 0 6 685 210 118 0 0 chr2L 13191318 13191352 -9820192 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 685 25 0 0 0 chr2L 13192051 13192076 -9819468 + AT_rich Low_complexity Low_complexity 1 25 0 6 685 22 0 0 0 chr2L 13195545 13195567 -9815977 + AT_rich Low_complexity Low_complexity 1 22 0 6 685 22 0 0 0 chr2L 13204145 13204167 -9807377 + AT_rich Low_complexity Low_complexity 1 22 0 6 685 26 0 0 0 chr2L 13205027 13205053 -9806491 + AT_rich Low_complexity Low_complexity 1 26 0 6 685 216 0 0 0 chr2L 13207768 13207792 -9803752 + (T)n Simple_repeat Simple_repeat 1 24 0 6 685 21 36 0 0 chr2L 13211894 13211922 -9799622 + AT_rich Low_complexity Low_complexity 1 28 0 6 685 23 0 0 0 chr2L 13212413 13212436 -9799108 + AT_rich Low_complexity Low_complexity 1 23 0 6 685 21 36 0 0 chr2L 13212635 13212663 -9798881 + AT_rich Low_complexity Low_complexity 1 28 0 6 685 21 0 0 0 chr2L 13215302 13215323 -9796221 + AT_rich Low_complexity Low_complexity 1 21 0 6 685 21 82 0 0 chr2L 13217625 13217674 -9793870 + AT_rich Low_complexity Low_complexity 1 49 0 6 685 24 53 0 0 chr2L 13218622 13218660 -9792884 + AT_rich Low_complexity Low_complexity 1 38 0 6 685 195 129 0 0 chr2L 13219649 13219680 -9791864 + (TTG)n Simple_repeat Simple_repeat 3 33 0 6 685 22 56 0 0 chr2L 13226261 13226297 -9785247 + AT_rich Low_complexity Low_complexity 1 36 0 6 685 22 0 0 0 chr2L 13228941 13228963 -9782581 + AT_rich Low_complexity Low_complexity 1 22 0 6 685 46 0 0 0 chr2L 13233643 13233689 -9777855 + AT_rich Low_complexity Low_complexity 1 46 0 6 685 206 178 13 76 chr2L 13236381 13236460 -9775084 + T-rich Low_complexity Low_complexity 4 77 0 6 685 21 57 0 0 chr2L 13237327 13237362 -9774182 + AT_rich Low_complexity Low_complexity 1 35 0 6 685 38 0 0 0 chr2L 13237521 13237559 -9773985 + AT_rich Low_complexity Low_complexity 1 38 0 6 686 21 0 0 0 chr2L 13238765 13238786 -9772758 + AT_rich Low_complexity Low_complexity 1 21 0 6 686 25 31 0 0 chr2L 13240981 13241013 -9770531 + AT_rich Low_complexity Low_complexity 1 32 0 6 686 24 32 0 0 chr2L 13241733 13241764 -9769780 + AT_rich Low_complexity Low_complexity 1 31 0 6 686 21585 6 0 0 chr2L 13242014 13244341 -9767203 + BS LINE Jockey 2798 5124 -2 6 686 21 0 0 0 chr2L 13244346 13244367 -9767177 + AT_rich Low_complexity Low_complexity 1 21 0 6 686 215 241 0 0 chr2L 13246452 13246506 -9765038 + A-rich Low_complexity Low_complexity 1 54 0 6 686 21 0 0 0 chr2L 13253313 13253334 -9758210 + AT_rich Low_complexity Low_complexity 1 21 0 6 686 28 0 0 0 chr2L 13253799 13253827 -9757717 + AT_rich Low_complexity Low_complexity 1 28 0 6 686 50 95 0 0 chr2L 13255137 13255285 -9756259 + AT_rich Low_complexity Low_complexity 1 148 0 6 686 26 30 0 0 chr2L 13260478 13260511 -9751033 + AT_rich Low_complexity Low_complexity 1 33 0 6 686 21 36 0 0 chr2L 13261457 13261485 -9750059 + AT_rich Low_complexity Low_complexity 1 28 0 6 686 22 0 0 0 chr2L 13263101 13263123 -9748421 + AT_rich Low_complexity Low_complexity 1 22 0 6 686 22 35 0 0 chr2L 13263650 13263679 -9747865 + AT_rich Low_complexity Low_complexity 1 29 0 6 686 237 213 0 0 chr2L 13264013 13264060 -9747484 + (CCCCAA)n Simple_repeat Simple_repeat 3 49 0 6 686 21 36 0 0 chr2L 13267994 13268022 -9743522 + AT_rich Low_complexity Low_complexity 1 28 0 6 686 24 53 0 0 chr2L 13268378 13268416 -9743128 + AT_rich Low_complexity Low_complexity 1 38 0 6 686 23 54 0 0 chr2L 13271171 13271208 -9740336 + AT_rich Low_complexity Low_complexity 1 37 0 6 686 180 125 0 0 chr2L 13272360 13272392 -9739152 + (CAG)n Simple_repeat Simple_repeat 3 34 0 6 686 198 71 0 0 chr2L 13272488 13272516 -9739028 + (CAG)n Simple_repeat Simple_repeat 2 29 0 6 686 271 184 173 10 chr2L 13272577 13272681 -9738863 + TART_B1 LINE telomeric 75 195 -10459 6 686 508 167 0 0 chr2L 13272618 13272720 -9738824 + ROO_I LTR Pao 643 744 -7512 6 686 301 79 0 119 chr2L 13272735 13272836 -9738708 + ROO_I LTR Pao 640 728 -7528 6 686 21 36 0 0 chr2L 13273058 13273086 -9738458 + AT_rich Low_complexity Low_complexity 1 28 0 6 686 285 109 0 0 chr2L 13273891 13273937 -9737607 + (CAG)n Simple_repeat Simple_repeat 1 46 0 6 686 318 183 0 0 chr2L 13277105 13277176 -9734368 + (TAA)n Simple_repeat Simple_repeat 2 72 0 6 686 183 80 0 0 chr2L 13282091 13282116 -9729428 + (TTCG)n Simple_repeat Simple_repeat 3 27 0 6 686 22 0 0 0 chr2L 13283820 13283842 -9727702 + AT_rich Low_complexity Low_complexity 1 22 0 6 686 23 0 0 0 chr2L 13286586 13286609 -9724935 + AT_rich Low_complexity Low_complexity 1 23 0 6 686 38 81 0 0 chr2L 13286629 13286716 -9724828 + AT_rich Low_complexity Low_complexity 1 87 0 6 686 24 32 0 0 chr2L 13289137 13289168 -9722376 + AT_rich Low_complexity Low_complexity 1 31 0 6 686 33 43 0 0 chr2L 13294613 13294660 -9716884 + AT_rich Low_complexity Low_complexity 1 47 0 6 686 21 36 0 0 chr2L 13301479 13301507 -9710037 + AT_rich Low_complexity Low_complexity 1 28 0 6 686 32 43 0 0 chr2L 13301619 13301665 -9709879 + AT_rich Low_complexity Low_complexity 1 46 0 6 686 29 0 0 0 chr2L 13301828 13301857 -9709687 + AT_rich Low_complexity Low_complexity 1 29 0 6 686 22 35 0 0 chr2L 13303324 13303353 -9708191 + AT_rich Low_complexity Low_complexity 1 29 0 6 686 248 238 0 0 chr2L 13304950 13305013 -9706531 + (CCCGAA)n Simple_repeat Simple_repeat 2 64 0 6 686 345 170 0 33 chr2L 13308621 13308712 -9702832 - ROO_I LTR Pao -7513 743 656 6 686 409 216 10 0 chr2L 13309714 13309816 -9701728 - ROO_I LTR Pao -7514 742 640 6 686 258 181 0 113 chr2L 13309947 13310053 -9701491 - ROO_I LTR Pao -7523 733 640 6 686 21 0 0 0 chr2L 13315618 13315639 -9695905 + AT_rich Low_complexity Low_complexity 1 21 0 6 686 205 250 0 18 chr2L 13318984 13319041 -9692503 + (TCGGG)n Simple_repeat Simple_repeat 3 58 0 6 686 208 227 0 0 chr2L 13319079 13319123 -9692421 + (CATA)n Simple_repeat Simple_repeat 1 44 0 6 686 192 40 0 0 chr2L 13319616 13319641 -9691903 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 686 198 143 0 0 chr2L 13321015 13321050 -9690494 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 686 300 102 0 0 chr2L 13322146 13322195 -9689349 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 686 252 0 0 0 chr2L 13322625 13322653 -9688891 + (TCC)n Simple_repeat Simple_repeat 2 29 0 6 686 225 0 0 0 chr2L 13323541 13323566 -9687978 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 686 189 0 0 0 chr2L 13327872 13327893 -9683651 + (CGAT)n Simple_repeat Simple_repeat 1 21 0 6 686 21 82 0 0 chr2L 13329405 13329454 -9682090 + AT_rich Low_complexity Low_complexity 1 49 0 6 686 22 35 0 0 chr2L 13330147 13330176 -9681368 + AT_rich Low_complexity Low_complexity 1 29 0 6 686 25 0 0 0 chr2L 13331779 13331804 -9679740 + AT_rich Low_complexity Low_complexity 1 25 0 6 686 39 50 0 0 chr2L 13331821 13331881 -9679663 + AT_rich Low_complexity Low_complexity 1 60 0 6 686 22 35 0 0 chr2L 13332756 13332785 -9678759 + AT_rich Low_complexity Low_complexity 1 29 0 6 686 21 0 0 0 chr2L 13332813 13332834 -9678710 + AT_rich Low_complexity Low_complexity 1 21 0 6 686 21 0 0 0 chr2L 13333127 13333148 -9678396 + AT_rich Low_complexity Low_complexity 1 21 0 6 686 212 122 24 0 chr2L 13334110 13334151 -9677393 + (TA)n Simple_repeat Simple_repeat 1 42 0 6 686 22 0 0 0 chr2L 13334239 13334261 -9677283 + AT_rich Low_complexity Low_complexity 1 22 0 6 686 26 30 0 0 chr2L 13334601 13334634 -9676910 + AT_rich Low_complexity Low_complexity 1 33 0 6 686 567 233 100 22 chr2L 13334950 13335130 -9676414 - DNAREP1_DM LINE Penelope -29 565 372 6 686 209 233 11 55 chr2L 13336773 13336864 -9674680 + (CATCC)n Simple_repeat Simple_repeat 5 91 0 6 686 23 0 0 0 chr2L 13338296 13338319 -9673225 + AT_rich Low_complexity Low_complexity 1 23 0 6 686 262 237 0 50 chr2L 13338578 13338658 -9672886 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 6 686 183 42 0 0 chr2L 13340468 13340492 -9671052 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 6 686 219 235 0 0 chr2L 13340647 13340698 -9670846 + (CACCAT)n Simple_repeat Simple_repeat 5 55 0 6 686 23 0 0 0 chr2L 13342105 13342128 -9669416 + AT_rich Low_complexity Low_complexity 1 23 0 6 686 31 26 0 0 chr2L 13342159 13342197 -9669347 + AT_rich Low_complexity Low_complexity 1 38 0 6 686 21 36 0 0 chr2L 13344017 13344045 -9667499 + AT_rich Low_complexity Low_complexity 1 28 0 6 686 26 0 0 0 chr2L 13345483 13345509 -9666035 + AT_rich Low_complexity Low_complexity 1 26 0 6 686 26 0 0 0 chr2L 13346081 13346107 -9665437 + AT_rich Low_complexity Low_complexity 1 26 0 6 686 23 0 0 0 chr2L 13347532 13347555 -9663989 + AT_rich Low_complexity Low_complexity 1 23 0 6 686 291 130 0 0 chr2L 13354246 13354300 -9657244 + (CTG)n Simple_repeat Simple_repeat 3 56 0 6 686 27 62 0 0 chr2L 13355294 13355342 -9656202 + AT_rich Low_complexity Low_complexity 1 48 0 6 686 384 40 0 0 chr2L 13358288 13358338 -9653206 + (CAGAC)n Simple_repeat Simple_repeat 4 53 0 6 686 198 71 0 0 chr2L 13358951 13358979 -9652565 + (CAG)n Simple_repeat Simple_repeat 1 28 0 6 686 21 0 0 0 chr2L 13362209 13362230 -9649314 + AT_rich Low_complexity Low_complexity 1 21 0 6 686 279 125 21 0 chr2L 13363407 13363455 -9648089 + FB4_DM DNA Tc1 19 67 -4022 6 686 24 85 0 0 chr2L 13366264 13366323 -9645221 + AT_rich Low_complexity Low_complexity 1 59 0 6 687 21 0 0 0 chr2L 13369834 13369855 -9641689 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 24 32 0 0 chr2L 13371106 13371137 -9640407 + AT_rich Low_complexity Low_complexity 1 31 0 6 687 205 240 0 0 chr2L 13373570 13373620 -9637924 + CT-rich Low_complexity Low_complexity 1 50 0 6 687 39 0 0 0 chr2L 13376448 13376487 -9635057 + AT_rich Low_complexity Low_complexity 1 39 0 6 687 22 70 0 0 chr2L 13378643 13378686 -9632858 + AT_rich Low_complexity Low_complexity 1 43 0 6 687 30 0 0 0 chr2L 13380904 13380934 -9630610 + AT_rich Low_complexity Low_complexity 1 30 0 6 687 27 0 0 0 chr2L 13382738 13382765 -9628779 + AT_rich Low_complexity Low_complexity 1 27 0 6 687 29 78 0 0 chr2L 13384152 13384216 -9627328 + AT_rich Low_complexity Low_complexity 1 64 0 6 687 21 0 0 0 chr2L 13385389 13385410 -9626134 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 30 27 0 0 chr2L 13387397 13387434 -9624110 + AT_rich Low_complexity Low_complexity 1 37 0 6 687 22 0 0 0 chr2L 13388351 13388373 -9623171 + AT_rich Low_complexity Low_complexity 1 22 0 6 687 203 0 37 0 chr2L 13389126 13389153 -9622391 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 687 41 21 0 0 chr2L 13398431 13398479 -9613065 + AT_rich Low_complexity Low_complexity 1 48 0 6 687 21 0 0 0 chr2L 13398748 13398769 -9612775 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 26 30 0 0 chr2L 13398833 13398866 -9612678 + AT_rich Low_complexity Low_complexity 1 33 0 6 687 23 0 0 0 chr2L 13401924 13401947 -9609597 + AT_rich Low_complexity Low_complexity 1 23 0 6 687 182 37 0 36 chr2L 13402755 13402783 -9608761 + (TATAG)n Simple_repeat Simple_repeat 4 30 0 6 687 43601 1 0 1 chr2L 13405704 13410430 -9601114 + DOC LINE Jockey 3 4725 0 6 687 36 62 0 0 chr2L 13411951 13412015 -9599529 + AT_rich Low_complexity Low_complexity 1 64 0 6 687 24 32 0 0 chr2L 13412422 13412453 -9599091 + AT_rich Low_complexity Low_complexity 1 31 0 6 687 22 0 0 0 chr2L 13413746 13413768 -9597776 + AT_rich Low_complexity Low_complexity 1 22 0 6 687 21 36 0 0 chr2L 13413793 13413821 -9597723 + AT_rich Low_complexity Low_complexity 1 28 0 6 687 27 0 0 0 chr2L 13416315 13416342 -9595202 + AT_rich Low_complexity Low_complexity 1 27 0 6 687 257 89 22 0 chr2L 13416692 13416737 -9594807 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 687 185 86 57 0 chr2L 13416973 13417008 -9594536 + (TTTTTA)n Simple_repeat Simple_repeat 3 39 0 6 687 258 81 0 0 chr2L 13423068 13423105 -9588439 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 687 183 80 0 0 chr2L 13424756 13424781 -9586763 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 687 26 50 0 0 chr2L 13425504 13425544 -9586000 + AT_rich Low_complexity Low_complexity 1 40 0 6 687 40 59 0 0 chr2L 13433760 13433828 -9577716 + AT_rich Low_complexity Low_complexity 1 68 0 6 687 24 0 0 0 chr2L 13437559 13437583 -9573961 + AT_rich Low_complexity Low_complexity 1 24 0 6 687 31 58 0 0 chr2L 13439532 13439584 -9571960 + AT_rich Low_complexity Low_complexity 1 52 0 6 687 21 0 0 0 chr2L 13440208 13440229 -9571315 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 22 56 0 0 chr2L 13445937 13445973 -9565571 + AT_rich Low_complexity Low_complexity 1 36 0 6 687 6050 0 0 1 chr2L 13449517 13450176 -9561368 - QUASIMODO_LTR LTR Gypsy 0 658 1 6 687 54189 4 0 0 chr2L 13450176 13456236 -9555308 - QUASIMODO_I LTR Gypsy 0 6060 1 6 687 6050 0 0 1 chr2L 13456236 13456895 -9554649 - QUASIMODO_LTR LTR Gypsy 0 658 1 6 687 185 163 0 20 chr2L 13457279 13457329 -9554215 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 687 21 36 0 0 chr2L 13457570 13457598 -9553946 + AT_rich Low_complexity Low_complexity 1 28 0 6 687 180 0 0 0 chr2L 13460542 13460562 -9550982 + (ATG)n Simple_repeat Simple_repeat 2 21 0 6 687 22 70 0 0 chr2L 13462609 13462652 -9548892 + AT_rich Low_complexity Low_complexity 1 43 0 6 687 26 30 0 0 chr2L 13463847 13463880 -9547664 + AT_rich Low_complexity Low_complexity 1 33 0 6 687 211 240 0 20 chr2L 13466418 13466469 -9545075 + (TTG)n Simple_repeat Simple_repeat 3 52 0 6 687 21 0 0 0 chr2L 13466712 13466733 -9544811 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 297 0 0 0 chr2L 13468350 13468383 -9543161 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 687 192 97 0 0 chr2L 13468716 13468747 -9542797 + (AACTG)n Simple_repeat Simple_repeat 3 33 0 6 687 21 36 0 0 chr2L 13468989 13469017 -9542527 + AT_rich Low_complexity Low_complexity 1 28 0 6 687 29 0 0 0 chr2L 13471181 13471210 -9540334 + AT_rich Low_complexity Low_complexity 1 29 0 6 687 23 33 0 0 chr2L 13475034 13475064 -9536480 + AT_rich Low_complexity Low_complexity 1 30 0 6 687 238 188 0 20 chr2L 13475153 13475202 -9536342 + (CCCGAA)n Simple_repeat Simple_repeat 1 48 0 6 687 218 271 0 0 chr2L 13478356 13478404 -9533140 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 687 271 216 81 0 chr2L 13479434 13479508 -9532036 + DNAREP1_DM LINE Penelope 2 81 -513 6 687 34 0 0 0 chr2L 13479586 13479620 -9531924 + AT_rich Low_complexity Low_complexity 1 34 0 6 687 4849 6 0 7 chr2L 13481502 13482044 -9529500 - LINEJ1_DM LINE Jockey -2 5018 4481 6 687 21 0 0 0 chr2L 13482493 13482514 -9529030 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 180 0 0 0 chr2L 13484486 13484506 -9527038 + (CCAA)n Simple_repeat Simple_repeat 1 20 0 6 687 229 268 24 12 chr2L 13485532 13485615 -9525929 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 6 687 206 250 24 36 chr2L 13486015 13486098 -9525446 + (TCTCTG)n Simple_repeat Simple_repeat 3 84 0 6 687 189 132 0 0 chr2L 13486936 13486974 -9524570 + (CCG)n Simple_repeat Simple_repeat 1 38 0 6 687 27 0 0 0 chr2L 13487458 13487485 -9524059 + AT_rich Low_complexity Low_complexity 1 27 0 6 687 216 0 0 0 chr2L 13489664 13489688 -9521856 + (TC)n Simple_repeat Simple_repeat 2 25 0 6 687 206 286 0 0 chr2L 13489804 13489860 -9521684 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 687 222 91 0 0 chr2L 13490036 13490069 -9521475 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 687 228 67 0 0 chr2L 13491798 13491828 -9519716 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 687 219 139 0 0 chr2L 13495205 13495241 -9516303 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 687 180 125 0 0 chr2L 13496116 13496148 -9515396 + (A)n Simple_repeat Simple_repeat 1 32 0 6 687 264 30 0 0 chr2L 13498041 13498074 -9513470 + (CAG)n Simple_repeat Simple_repeat 1 33 0 6 687 255 157 0 0 chr2L 13498229 13498280 -9513264 + (CAG)n Simple_repeat Simple_repeat 3 53 0 6 688 22 0 0 0 chr2L 13501190 13501212 -9510332 + AT_rich Low_complexity Low_complexity 1 22 0 6 688 224 203 34 0 chr2L 13503265 13503324 -9508220 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 688 249 208 0 0 chr2L 13507664 13507717 -9503827 + (TGG)n Simple_repeat Simple_repeat 2 54 0 6 688 217 235 0 0 chr2L 13508792 13508843 -9502701 + (CCCGAA)n Simple_repeat Simple_repeat 6 56 0 6 688 30 45 0 0 chr2L 13509246 13509290 -9502254 + AT_rich Low_complexity Low_complexity 1 44 0 6 688 24 0 0 0 chr2L 13510080 13510104 -9501440 + AT_rich Low_complexity Low_complexity 1 24 0 6 688 201 74 0 0 chr2L 13511608 13511635 -9499909 + (CATA)n Simple_repeat Simple_repeat 2 28 0 6 688 253 169 17 17 chr2L 13512966 13513026 -9498518 + (CTG)n Simple_repeat Simple_repeat 3 62 0 6 688 210 171 0 0 chr2L 13513134 13513175 -9498369 + (CTG)n Simple_repeat Simple_repeat 1 41 0 6 688 201 74 0 0 chr2L 13513491 13513518 -9498026 + (GA)n Simple_repeat Simple_repeat 2 28 0 6 688 210 150 0 0 chr2L 13514285 13514325 -9497219 + (CTCG)n Simple_repeat Simple_repeat 2 41 0 6 688 228 214 0 0 chr2L 13515394 13515450 -9496094 + (TATG)n Simple_repeat Simple_repeat 3 58 0 6 688 21 0 0 0 chr2L 13515792 13515813 -9495731 + AT_rich Low_complexity Low_complexity 1 21 0 6 688 26 30 0 0 chr2L 13515954 13515987 -9495557 + AT_rich Low_complexity Low_complexity 1 33 0 6 688 22 35 0 0 chr2L 13516947 13516976 -9494568 + AT_rich Low_complexity Low_complexity 1 29 0 6 688 2879 3 0 0 chr2L 13522312 13522642 -9488902 - TRANSPAC_LTR LTR Gypsy 0 330 1 6 688 38772 2 0 0 chr2L 13522641 13527231 -9484313 - TRANSPAC_I LTR Gypsy 0 4590 1 6 688 2879 3 0 0 chr2L 13527231 13527561 -9483983 - TRANSPAC_LTR LTR Gypsy 0 330 1 6 688 30 45 0 0 chr2L 13528770 13528814 -9482730 + AT_rich Low_complexity Low_complexity 1 44 0 6 688 200 113 62 31 chr2L 13533589 13533653 -9477891 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 688 225 0 0 0 chr2L 13534577 13534602 -9476942 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 688 23 54 0 0 chr2L 13536082 13536119 -9475425 + AT_rich Low_complexity Low_complexity 1 37 0 6 688 201 121 0 0 chr2L 13538712 13538745 -9472799 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 688 21 36 0 0 chr2L 13540311 13540339 -9471205 + AT_rich Low_complexity Low_complexity 1 28 0 6 688 381 85 68 0 chr2L 13543728 13543787 -9467757 - DNAREP1_DM LINE Penelope -108 486 424 6 688 23 0 0 0 chr2L 13543999 13544022 -9467522 + AT_rich Low_complexity Low_complexity 1 23 0 6 688 207 100 0 0 chr2L 13545374 13545404 -9466140 + (A)n Simple_repeat Simple_repeat 1 30 0 6 688 207 100 0 0 chr2L 13545881 13545911 -9465633 + (CAA)n Simple_repeat Simple_repeat 1 30 0 6 688 21 36 0 0 chr2L 13546011 13546039 -9465505 + AT_rich Low_complexity Low_complexity 1 28 0 6 688 183 42 0 0 chr2L 13546232 13546256 -9465288 + (A)n Simple_repeat Simple_repeat 1 24 0 6 688 195 42 0 0 chr2L 13546989 13547013 -9464531 + (CTG)n Simple_repeat Simple_repeat 3 26 0 6 688 220 204 0 0 chr2L 13548018 13548062 -9463482 + CT-rich Low_complexity Low_complexity 3 46 0 6 688 183 42 0 0 chr2L 13548895 13548919 -9462625 + (TC)n Simple_repeat Simple_repeat 1 24 0 6 688 268 243 0 28 chr2L 13550228 13550300 -9461244 + (CGTG)n Simple_repeat Simple_repeat 3 72 0 6 688 40 48 0 35 chr2L 13551023 13551110 -9460434 + AT_rich Low_complexity Low_complexity 1 84 0 6 688 24 0 0 0 chr2L 13551505 13551529 -9460015 + AT_rich Low_complexity Low_complexity 1 24 0 6 688 33 0 0 0 chr2L 13551727 13551760 -9459784 + AT_rich Low_complexity Low_complexity 1 33 0 6 688 41 36 0 0 chr2L 13553058 13553113 -9458431 + AT_rich Low_complexity Low_complexity 1 55 0 6 688 200 81 81 0 chr2L 13553910 13553947 -9457597 + (AAATG)n Simple_repeat Simple_repeat 1 40 0 6 688 262 300 0 0 chr2L 13554680 13554750 -9456794 + T-rich Low_complexity Low_complexity 2 71 0 6 688 21 0 0 0 chr2L 13555172 13555193 -9456351 + AT_rich Low_complexity Low_complexity 1 21 0 6 688 28 0 0 0 chr2L 13556839 13556867 -9454677 + AT_rich Low_complexity Low_complexity 1 28 0 6 688 32 0 0 0 chr2L 13557226 13557258 -9454286 + AT_rich Low_complexity Low_complexity 1 32 0 6 688 263 114 23 0 chr2L 13558444 13558488 -9453056 + DNAREP1_DM LINE Penelope 1 45 -549 6 688 24 0 0 0 chr2L 13560258 13560282 -9451262 + AT_rich Low_complexity Low_complexity 1 24 0 6 688 189 0 0 0 chr2L 13560492 13560513 -9451031 + (A)n Simple_repeat Simple_repeat 1 21 0 6 688 40555 1 0 0 chr2L 13560516 13565208 -9446336 + FW_DM LINE Jockey 1 4692 0 6 688 29 0 0 0 chr2L 13565661 13565690 -9445854 + AT_rich Low_complexity Low_complexity 1 29 0 6 688 36 53 0 0 chr2L 13566811 13566868 -9444676 + AT_rich Low_complexity Low_complexity 1 57 0 6 688 273 119 0 0 chr2L 13569256 13569298 -9442246 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 688 192 125 0 0 chr2L 13569527 13569559 -9441985 + (CAGAA)n Simple_repeat Simple_repeat 4 35 0 6 688 25 31 0 0 chr2L 13571609 13571641 -9439903 + AT_rich Low_complexity Low_complexity 1 32 0 6 688 42 36 0 0 chr2L 13572216 13572272 -9439272 + AT_rich Low_complexity Low_complexity 1 56 0 6 688 209 183 17 0 chr2L 13572552 13572612 -9438932 + (ACTG)n Simple_repeat Simple_repeat 1 61 0 6 688 25 0 0 0 chr2L 13574191 13574216 -9437328 + AT_rich Low_complexity Low_complexity 1 25 0 6 688 32 67 0 0 chr2L 13576135 13576195 -9435349 + AT_rich Low_complexity Low_complexity 1 60 0 6 688 203 133 0 0 chr2L 13578333 13578363 -9433181 + (CATA)n Simple_repeat Simple_repeat 3 32 0 6 688 195 139 0 0 chr2L 13579649 13579685 -9431859 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 6 688 207 162 0 0 chr2L 13580360 13580397 -9431147 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 6 688 315 0 0 0 chr2L 13580808 13580843 -9430701 + (TAA)n Simple_repeat Simple_repeat 2 36 0 6 688 329 150 0 32 chr2L 13581902 13581964 -9429580 + DNAREP1_DM LINE Penelope 1 60 -534 6 688 183 42 0 0 chr2L 13582713 13582737 -9428807 + (CGAAT)n Simple_repeat Simple_repeat 1 24 0 6 688 30 0 0 0 chr2L 13584699 13584729 -9426815 + AT_rich Low_complexity Low_complexity 1 30 0 6 688 231 61 0 0 chr2L 13588476 13588509 -9423035 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 6 688 27 29 0 0 chr2L 13589971 13590005 -9421539 + AT_rich Low_complexity Low_complexity 1 34 0 6 688 186 143 0 0 chr2L 13590357 13590392 -9421152 + (TA)n Simple_repeat Simple_repeat 2 36 0 6 688 21 0 0 0 chr2L 13590814 13590835 -9420709 + AT_rich Low_complexity Low_complexity 1 21 0 6 688 23 0 0 0 chr2L 13594309 13594332 -9417212 + AT_rich Low_complexity Low_complexity 1 23 0 6 688 180 77 0 0 chr2L 13597548 13597574 -9413970 + (TCG)n Simple_repeat Simple_repeat 2 27 0 6 688 239 93 0 23 chr2L 13597949 13597993 -9413551 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 6 688 9639 8 0 0 chr2L 13599228 13600361 -9411183 - G2_DM LINE Jockey 0 3102 1970 6 688 247 283 11 21 chr2L 13600286 13600380 -9411164 - TART_B1 LINE telomeric -4608 6046 5954 6 688 180 0 0 0 chr2L 13602945 13602965 -9408579 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 688 21 0 0 0 chr2L 13604828 13604849 -9406695 + AT_rich Low_complexity Low_complexity 1 21 0 6 688 198 71 0 0 chr2L 13607528 13607556 -9403988 + (A)n Simple_repeat Simple_repeat 1 28 0 6 688 339 111 0 0 chr2L 13611260 13611314 -9400230 - DNAREP1_DM LINE Penelope -540 54 1 6 688 315 0 0 0 chr2L 13615387 13615422 -9396122 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 6 688 21 0 0 0 chr2L 13616756 13616777 -9394767 + AT_rich Low_complexity Low_complexity 1 21 0 6 688 26 30 0 0 chr2L 13617976 13618009 -9393535 + AT_rich Low_complexity Low_complexity 1 33 0 6 688 22 0 0 0 chr2L 13618827 13618849 -9392695 + AT_rich Low_complexity Low_complexity 1 22 0 6 688 210 139 0 0 chr2L 13619485 13619521 -9392023 + (GCTG)n Simple_repeat Simple_repeat 1 36 0 6 688 23 54 0 0 chr2L 13620018 13620055 -9391489 + AT_rich Low_complexity Low_complexity 1 37 0 6 688 210 250 0 0 chr2L 13620830 13620878 -9390666 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 6 688 264 200 0 0 chr2L 13623671 13623741 -9387803 + (CAT)n Simple_repeat Simple_repeat 3 72 0 6 688 25 65 0 0 chr2L 13625620 13625666 -9385878 + AT_rich Low_complexity Low_complexity 1 46 0 6 688 192 40 0 0 chr2L 13626164 13626189 -9385355 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 688 24 67 0 0 chr2L 13627307 13627352 -9384192 + AT_rich Low_complexity Low_complexity 1 45 0 6 688 24 67 0 0 chr2L 13627642 13627687 -9383857 + AT_rich Low_complexity Low_complexity 1 45 0 6 688 23 33 0 0 chr2L 13627789 13627819 -9383725 + AT_rich Low_complexity Low_complexity 1 30 0 6 689 240 149 0 0 chr2L 13633546 13633593 -9377951 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 689 229 245 0 0 chr2L 13635724 13635777 -9375767 + (CGG)n Simple_repeat Simple_repeat 3 55 0 6 689 231 260 14 14 chr2L 13636119 13636193 -9375351 + (CAG)n Simple_repeat Simple_repeat 1 74 0 6 689 363 137 0 0 chr2L 13637341 13637414 -9374130 + (CAG)n Simple_repeat Simple_repeat 2 74 0 6 689 29 70 0 0 chr2L 13639048 13639105 -9372439 + AT_rich Low_complexity Low_complexity 1 57 0 6 689 23 54 0 0 chr2L 13639140 13639177 -9372367 + AT_rich Low_complexity Low_complexity 1 37 0 6 689 206 185 30 30 chr2L 13639302 13639369 -9372175 + (TTAA)n Simple_repeat Simple_repeat 2 68 0 6 689 42 0 0 0 chr2L 13641544 13641586 -9369958 + AT_rich Low_complexity Low_complexity 1 42 0 6 689 54 68 0 0 chr2L 13641872 13641975 -9369569 + AT_rich Low_complexity Low_complexity 1 103 0 6 689 240 86 0 0 chr2L 13643841 13643876 -9367668 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 689 186 43 0 0 chr2L 13647557 13647580 -9363964 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 689 180 0 0 0 chr2L 13650069 13650089 -9361455 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 689 27 0 0 0 chr2L 13651999 13652026 -9359518 + AT_rich Low_complexity Low_complexity 1 27 0 6 689 23 0 0 0 chr2L 13652778 13652801 -9358743 + AT_rich Low_complexity Low_complexity 1 23 0 6 689 186 43 0 0 chr2L 13656606 13656629 -9354915 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 689 27 62 0 0 chr2L 13658148 13658196 -9353348 + AT_rich Low_complexity Low_complexity 1 48 0 6 689 180 0 0 0 chr2L 13659117 13659137 -9352407 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 689 27 0 0 0 chr2L 13661047 13661074 -9350470 + AT_rich Low_complexity Low_complexity 1 27 0 6 689 23 0 0 0 chr2L 13661826 13661849 -9349695 + AT_rich Low_complexity Low_complexity 1 23 0 6 689 22 99 0 0 chr2L 13664983 13665054 -9346490 + AT_rich Low_complexity Low_complexity 1 71 0 6 689 205 236 18 18 chr2L 13665963 13666019 -9345525 + (CAA)n Simple_repeat Simple_repeat 2 57 0 6 689 32 81 0 0 chr2L 13669934 13670008 -9341536 + AT_rich Low_complexity Low_complexity 1 74 0 6 689 22 0 0 0 chr2L 13671194 13671216 -9340328 + AT_rich Low_complexity Low_complexity 1 22 0 6 689 278 87 0 21 chr2L 13672588 13672635 -9338909 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 6 689 21 0 0 0 chr2L 13673209 13673230 -9338314 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 21 0 0 0 chr2L 13677124 13677145 -9334399 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 27 0 0 0 chr2L 13677214 13677241 -9334303 + AT_rich Low_complexity Low_complexity 1 27 0 6 689 28 29 0 0 chr2L 13677631 13677666 -9333878 + AT_rich Low_complexity Low_complexity 1 35 0 6 689 30 27 0 0 chr2L 13677987 13678024 -9333520 + AT_rich Low_complexity Low_complexity 1 37 0 6 689 22 56 0 0 chr2L 13681341 13681377 -9330167 + AT_rich Low_complexity Low_complexity 1 36 0 6 689 216 97 0 0 chr2L 13684963 13684994 -9326550 + (TTTCG)n Simple_repeat Simple_repeat 5 35 0 6 689 210 174 22 0 chr2L 13685159 13685205 -9326339 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 689 24 67 0 0 chr2L 13685752 13685797 -9325747 + AT_rich Low_complexity Low_complexity 1 45 0 6 689 28 0 0 0 chr2L 13700983 13701011 -9310533 + AT_rich Low_complexity Low_complexity 1 28 0 6 689 26 82 0 0 chr2L 13703739 13703800 -9307744 + AT_rich Low_complexity Low_complexity 1 61 0 6 689 258 32 0 0 chr2L 13706306 13706337 -9305207 + (CAA)n Simple_repeat Simple_repeat 3 33 0 6 689 28 29 0 0 chr2L 13707220 13707255 -9304289 + AT_rich Low_complexity Low_complexity 1 35 0 6 689 21 0 0 0 chr2L 13710844 13710865 -9300679 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 33 66 0 0 chr2L 13715962 13716023 -9295521 + AT_rich Low_complexity Low_complexity 1 61 0 6 689 21 57 0 0 chr2L 13716762 13716797 -9294747 + AT_rich Low_complexity Low_complexity 1 35 0 6 689 21 57 0 0 chr2L 13717582 13717617 -9293927 + AT_rich Low_complexity Low_complexity 1 35 0 6 689 25 0 0 0 chr2L 13720739 13720764 -9290780 + AT_rich Low_complexity Low_complexity 1 25 0 6 689 244 282 0 0 chr2L 13720880 13720951 -9290593 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 689 21 71 0 0 chr2L 13723676 13723718 -9287826 + AT_rich Low_complexity Low_complexity 1 42 0 6 689 26 0 0 0 chr2L 13726869 13726895 -9284649 + AT_rich Low_complexity Low_complexity 1 26 0 6 689 22 0 0 0 chr2L 13726915 13726937 -9284607 + AT_rich Low_complexity Low_complexity 1 22 0 6 689 28 0 0 0 chr2L 13730831 13730859 -9280685 + AT_rich Low_complexity Low_complexity 1 28 0 6 689 28 61 0 0 chr2L 13731281 13731330 -9280214 + AT_rich Low_complexity Low_complexity 1 49 0 6 689 21 0 0 0 chr2L 13733913 13733934 -9277610 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 21 0 0 0 chr2L 13740077 13740098 -9271446 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 21 0 0 0 chr2L 13745312 13745333 -9266211 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 186 103 0 0 chr2L 13754526 13754555 -9256989 + (ATG)n Simple_repeat Simple_repeat 1 29 0 6 689 26 50 0 0 chr2L 13754832 13754872 -9256672 + AT_rich Low_complexity Low_complexity 1 40 0 6 689 21 0 0 0 chr2L 13755191 13755212 -9256332 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 21 36 0 0 chr2L 13758741 13758769 -9252775 + AT_rich Low_complexity Low_complexity 1 28 0 6 689 21 0 0 0 chr2L 13759948 13759969 -9251575 + AT_rich Low_complexity Low_complexity 1 21 0 6 689 282 106 0 0 chr2L 13760516 13760563 -9250981 + (AGTTG)n Simple_repeat Simple_repeat 5 51 0 6 86 9538 2 1 3 chr2L 13761860 13762907 -9248637 - DOC LINE Jockey 0 4725 3681 6 690 23 0 0 0 chr2L 13763486 13763509 -9248035 + AT_rich Low_complexity Low_complexity 1 23 0 6 690 21 57 0 0 chr2L 13764756 13764791 -9246753 + AT_rich Low_complexity Low_complexity 1 35 0 6 690 23 33 0 0 chr2L 13767988 13768018 -9243526 + AT_rich Low_complexity Low_complexity 1 30 0 6 690 34 0 0 0 chr2L 13769638 13769672 -9241872 + AT_rich Low_complexity Low_complexity 1 34 0 6 690 21 100 0 0 chr2L 13770906 13770976 -9240568 + AT_rich Low_complexity Low_complexity 1 70 0 6 690 27 0 0 0 chr2L 13772588 13772615 -9238929 + AT_rich Low_complexity Low_complexity 1 27 0 6 690 218 176 0 38 chr2L 13776977 13777030 -9234514 + T-rich Low_complexity Low_complexity 6 56 0 6 690 255 93 0 0 chr2L 13777515 13777558 -9233986 + (CTG)n Simple_repeat Simple_repeat 3 45 0 6 690 192 200 0 0 chr2L 13778313 13778358 -9233186 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 690 246 136 0 0 chr2L 13779993 13780037 -9231507 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 690 21 107 0 0 chr2L 13780438 13780522 -9231022 + AT_rich Low_complexity Low_complexity 1 84 0 6 690 33 25 0 0 chr2L 13783597 13783637 -9227907 + AT_rich Low_complexity Low_complexity 1 40 0 6 690 1019 110 371 4 chr2L 13783720 13783957 -9227587 - S_DM DNA Tc1 -14 1722 1399 6 690 230 224 165 0 chr2L 13784619 13784704 -9226840 - DNAREP1_DM LINE Penelope -29 565 467 6 690 40 0 0 0 chr2L 13790513 13790553 -9220991 + AT_rich Low_complexity Low_complexity 1 40 0 6 690 335 130 0 0 chr2L 13790647 13790701 -9220843 - DNAREP1_DM LINE Penelope -540 54 1 6 690 22 0 0 0 chr2L 13793371 13793393 -9218151 + AT_rich Low_complexity Low_complexity 1 22 0 6 690 27 0 0 0 chr2L 13799299 13799326 -9212218 + AT_rich Low_complexity Low_complexity 1 27 0 6 690 381 117 0 0 chr2L 13799382 13799442 -9212102 + (TA)n Simple_repeat Simple_repeat 1 60 0 6 690 29 70 0 0 chr2L 13799609 13799666 -9211878 + AT_rich Low_complexity Low_complexity 1 57 0 6 690 21 36 0 0 chr2L 13803042 13803070 -9208474 + AT_rich Low_complexity Low_complexity 1 28 0 6 690 23 0 0 0 chr2L 13803735 13803758 -9207786 + AT_rich Low_complexity Low_complexity 1 23 0 6 690 32 0 0 0 chr2L 13806777 13806809 -9204735 + AT_rich Low_complexity Low_complexity 1 32 0 6 690 25 0 0 0 chr2L 13813594 13813619 -9197925 + AT_rich Low_complexity Low_complexity 1 25 0 6 690 21 0 0 0 chr2L 13813666 13813687 -9197857 + AT_rich Low_complexity Low_complexity 1 21 0 6 690 270 298 12 12 chr2L 13814273 13814358 -9197186 + (CGG)n Simple_repeat Simple_repeat 2 86 0 6 690 222 37 0 0 chr2L 13819491 13819518 -9192026 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 690 24 67 0 0 chr2L 13819720 13819765 -9191779 + AT_rich Low_complexity Low_complexity 1 45 0 6 690 192 77 0 0 chr2L 13821587 13821613 -9189931 + (TAA)n Simple_repeat Simple_repeat 2 27 0 6 690 28 48 0 0 chr2L 13827834 13827876 -9183668 + AT_rich Low_complexity Low_complexity 1 42 0 6 690 26 30 0 0 chr2L 13831482 13831515 -9180029 + AT_rich Low_complexity Low_complexity 1 33 0 6 690 21 0 0 0 chr2L 13835165 13835186 -9176358 + AT_rich Low_complexity Low_complexity 1 21 0 6 690 216 67 0 0 chr2L 13837512 13837542 -9174002 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 690 21 36 0 0 chr2L 13841392 13841420 -9170124 + AT_rich Low_complexity Low_complexity 1 28 0 6 690 25 0 0 0 chr2L 13841948 13841973 -9169571 + AT_rich Low_complexity Low_complexity 1 25 0 6 690 3726 5 0 0 chr2L 13853139 13853567 -9157977 - ROO_LTR LTR Pao 0 428 1 6 690 70080 1 3 0 chr2L 13853567 13861802 -9149742 - ROO_I LTR Pao 0 8256 1 6 690 3699 5 0 2 chr2L 13861802 13862231 -9149313 - ROO_LTR LTR Pao 0 428 1 6 690 21 0 0 0 chr2L 13872471 13872492 -9139052 + AT_rich Low_complexity Low_complexity 1 21 0 6 690 255 31 0 0 chr2L 13873443 13873475 -9138069 + (CAGTT)n Simple_repeat Simple_repeat 4 35 0 6 690 252 158 0 0 chr2L 13874358 13874415 -9137129 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 6 690 21 82 0 0 chr2L 13878605 13878654 -9132890 + AT_rich Low_complexity Low_complexity 1 49 0 6 691 183 129 0 0 chr2L 13893905 13893936 -9117608 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 691 201 74 0 0 chr2L 13894615 13894642 -9116902 + (GAGTG)n Simple_repeat Simple_repeat 4 30 0 6 691 185 94 31 0 chr2L 13898290 13898322 -9113222 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 691 25 31 0 0 chr2L 13905398 13905430 -9106114 + AT_rich Low_complexity Low_complexity 1 32 0 6 691 192 40 0 0 chr2L 13906521 13906546 -9104998 + (A)n Simple_repeat Simple_repeat 1 25 0 6 691 35 0 0 0 chr2L 13907309 13907344 -9104200 + AT_rich Low_complexity Low_complexity 1 35 0 6 691 21 57 0 0 chr2L 13907503 13907538 -9104006 + AT_rich Low_complexity Low_complexity 1 35 0 6 691 21 36 0 0 chr2L 13909227 13909255 -9102289 + AT_rich Low_complexity Low_complexity 1 28 0 6 691 21 36 0 0 chr2L 13911679 13911707 -9099837 + AT_rich Low_complexity Low_complexity 1 28 0 6 691 200 36 0 113 chr2L 13913629 13913691 -9097853 + (TAA)n Simple_repeat Simple_repeat 3 57 0 6 691 21 0 0 0 chr2L 13916320 13916341 -9095203 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 29 60 0 0 chr2L 13918093 13918143 -9093401 + AT_rich Low_complexity Low_complexity 1 50 0 6 691 26 50 0 0 chr2L 13920123 13920163 -9091381 + AT_rich Low_complexity Low_complexity 1 40 0 6 691 189 74 0 0 chr2L 13923754 13923781 -9087763 + (TTG)n Simple_repeat Simple_repeat 3 29 0 6 691 226 218 0 18 chr2L 13925424 13925480 -9086064 + (CACTC)n Simple_repeat Simple_repeat 2 56 0 6 691 21 36 0 0 chr2L 13925694 13925722 -9085822 + AT_rich Low_complexity Low_complexity 1 28 0 6 691 23 33 0 0 chr2L 13925802 13925832 -9085712 + AT_rich Low_complexity Low_complexity 1 30 0 6 691 28 61 0 0 chr2L 13931774 13931823 -9079721 + AT_rich Low_complexity Low_complexity 1 49 0 6 691 27 29 0 0 chr2L 13931902 13931936 -9079608 + AT_rich Low_complexity Low_complexity 1 34 0 6 691 24 0 0 0 chr2L 13932143 13932167 -9079377 + AT_rich Low_complexity Low_complexity 1 24 0 6 691 269 110 55 0 chr2L 13932254 13932327 -9079217 + (TA)n Simple_repeat Simple_repeat 1 77 0 6 691 22 70 0 0 chr2L 13932546 13932589 -9078955 + AT_rich Low_complexity Low_complexity 1 43 0 6 691 21 0 0 0 chr2L 13934479 13934500 -9077044 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 32 43 0 0 chr2L 13935607 13935653 -9075891 + AT_rich Low_complexity Low_complexity 1 46 0 6 691 24 32 0 0 chr2L 13935735 13935766 -9075778 + AT_rich Low_complexity Low_complexity 1 31 0 6 691 21 0 0 0 chr2L 13936942 13936963 -9074581 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 23 0 0 0 chr2L 13942910 13942933 -9068611 + AT_rich Low_complexity Low_complexity 1 23 0 6 691 22 35 0 0 chr2L 13944579 13944608 -9066936 + AT_rich Low_complexity Low_complexity 1 29 0 6 691 22 35 0 0 chr2L 13944749 13944778 -9066766 + AT_rich Low_complexity Low_complexity 1 29 0 6 691 28 0 0 0 chr2L 13946103 13946131 -9065413 + AT_rich Low_complexity Low_complexity 1 28 0 6 691 22 0 0 0 chr2L 13948135 13948157 -9063387 + AT_rich Low_complexity Low_complexity 1 22 0 6 691 22 0 0 0 chr2L 13950776 13950798 -9060746 + AT_rich Low_complexity Low_complexity 1 22 0 6 691 24 0 0 0 chr2L 13952223 13952247 -9059297 + AT_rich Low_complexity Low_complexity 1 24 0 6 691 27 0 0 0 chr2L 13954238 13954265 -9057279 + AT_rich Low_complexity Low_complexity 1 27 0 6 691 23 33 0 0 chr2L 13955728 13955758 -9055786 + AT_rich Low_complexity Low_complexity 1 30 0 6 691 22 0 0 0 chr2L 13962072 13962094 -9049450 + AT_rich Low_complexity Low_complexity 1 22 0 6 691 25 51 0 0 chr2L 13962866 13962905 -9048639 + AT_rich Low_complexity Low_complexity 1 39 0 6 691 33 90 0 0 chr2L 13963196 13963285 -9048259 + AT_rich Low_complexity Low_complexity 1 89 0 6 691 23 33 0 0 chr2L 13963806 13963836 -9047708 + AT_rich Low_complexity Low_complexity 1 30 0 6 691 21 0 0 0 chr2L 13968842 13968863 -9042681 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 185 0 0 39 chr2L 13970241 13970267 -9041277 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 6 691 21 57 0 0 chr2L 13970288 13970323 -9041221 + AT_rich Low_complexity Low_complexity 1 35 0 6 691 23 78 0 0 chr2L 13970902 13970953 -9040591 + AT_rich Low_complexity Low_complexity 1 51 0 6 691 40 21 0 0 chr2L 13972217 13972264 -9039280 + AT_rich Low_complexity Low_complexity 1 47 0 6 691 30 0 0 0 chr2L 13972644 13972674 -9038870 + AT_rich Low_complexity Low_complexity 1 30 0 6 691 22 35 0 0 chr2L 13973436 13973465 -9038079 + AT_rich Low_complexity Low_complexity 1 29 0 6 691 36 53 0 0 chr2L 13974110 13974167 -9037377 + AT_rich Low_complexity Low_complexity 1 57 0 6 691 22 0 0 0 chr2L 13975938 13975960 -9035584 + AT_rich Low_complexity Low_complexity 1 22 0 6 691 31 26 0 0 chr2L 13979168 13979206 -9032338 + AT_rich Low_complexity Low_complexity 1 38 0 6 691 29 0 0 0 chr2L 13979645 13979674 -9031870 + AT_rich Low_complexity Low_complexity 1 29 0 6 691 237 33 0 0 chr2L 13982853 13982883 -9028661 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 691 28 0 0 0 chr2L 13992128 13992156 -9019388 + AT_rich Low_complexity Low_complexity 1 28 0 6 691 27 49 0 0 chr2L 13992804 13992845 -9018699 + AT_rich Low_complexity Low_complexity 1 41 0 6 691 180 125 0 0 chr2L 13994273 13994305 -9017239 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 691 21 71 0 0 chr2L 13994930 13994972 -9016572 + AT_rich Low_complexity Low_complexity 1 42 0 6 691 223 216 40 26 chr2L 13995493 13995569 -9015975 + A-rich Low_complexity Low_complexity 4 80 0 6 691 25 75 0 0 chr2L 13996912 13996965 -9014579 + AT_rich Low_complexity Low_complexity 1 53 0 6 691 255 229 0 0 chr2L 14000823 14000884 -9010660 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 691 354 107 0 0 chr2L 14001277 14001333 -9010211 + (CAG)n Simple_repeat Simple_repeat 1 56 0 6 691 25 0 0 0 chr2L 14006199 14006224 -9005320 + AT_rich Low_complexity Low_complexity 1 25 0 6 691 29 47 0 0 chr2L 14008785 14008828 -9002716 + AT_rich Low_complexity Low_complexity 1 43 0 6 691 22 0 0 0 chr2L 14012906 14012928 -8998616 + AT_rich Low_complexity Low_complexity 1 22 0 6 691 25 31 0 0 chr2L 14013285 14013317 -8998227 + AT_rich Low_complexity Low_complexity 1 32 0 6 691 237 33 0 0 chr2L 14014146 14014176 -8997368 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 6 691 198 71 0 0 chr2L 14017491 14017519 -8994025 + (CTG)n Simple_repeat Simple_repeat 1 28 0 6 691 256 248 81 49 chr2L 14020896 14021019 -8990525 - DNAREP1_DM LINE Penelope -1 593 467 6 691 23 0 0 0 chr2L 14021230 14021253 -8990291 + AT_rich Low_complexity Low_complexity 1 23 0 6 691 24 67 0 0 chr2L 14021364 14021409 -8990135 + AT_rich Low_complexity Low_complexity 1 45 0 6 691 281 26 0 26 chr2L 14022074 14022113 -8989431 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 692 189 74 0 0 chr2L 14025285 14025312 -8986232 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 692 26 30 0 0 chr2L 14025653 14025686 -8985858 + AT_rich Low_complexity Low_complexity 1 33 0 6 692 266 260 74 22 chr2L 14026615 14026739 -8984805 + DNAREP1_DM LINE Penelope 410 473 -121 6 692 203 116 47 0 chr2L 14026795 14026838 -8984706 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 6 692 21 36 0 0 chr2L 14028234 14028262 -8983282 + AT_rich Low_complexity Low_complexity 1 28 0 6 692 21 57 0 0 chr2L 14030507 14030542 -8981002 + AT_rich Low_complexity Low_complexity 1 35 0 6 692 29 0 0 0 chr2L 14030654 14030683 -8980861 + AT_rich Low_complexity Low_complexity 1 29 0 6 692 225 180 0 0 chr2L 14035528 14035578 -8975966 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 692 28 0 0 0 chr2L 14036096 14036124 -8975420 + AT_rich Low_complexity Low_complexity 1 28 0 6 692 205 27 26 51 chr2L 14039534 14039573 -8971971 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 6 692 21 0 0 0 chr2L 14039634 14039655 -8971889 + AT_rich Low_complexity Low_complexity 1 21 0 6 692 213 281 12 0 chr2L 14040394 14040476 -8971068 + (TG)n Simple_repeat Simple_repeat 1 83 0 6 692 182 62 31 0 chr2L 14040500 14040532 -8971012 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 692 198 0 0 0 chr2L 14040801 14040823 -8970721 + (CAT)n Simple_repeat Simple_repeat 1 22 0 6 692 28 48 0 0 chr2L 14041979 14042021 -8969523 + AT_rich Low_complexity Low_complexity 1 42 0 6 692 21 36 0 0 chr2L 14042068 14042096 -8969448 + AT_rich Low_complexity Low_complexity 1 28 0 6 692 22 35 0 0 chr2L 14044844 14044873 -8966671 + AT_rich Low_complexity Low_complexity 1 29 0 6 692 219 69 0 0 chr2L 14045949 14045978 -8965566 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 692 21 0 0 0 chr2L 14049664 14049685 -8961859 + AT_rich Low_complexity Low_complexity 1 21 0 6 692 303 122 0 0 chr2L 14050166 14050215 -8961329 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 692 203 250 0 0 chr2L 14050269 14050313 -8961231 + (ACTCG)n Simple_repeat Simple_repeat 3 46 0 6 692 23 54 0 0 chr2L 14050778 14050815 -8960729 + AT_rich Low_complexity Low_complexity 1 37 0 6 692 207 100 0 0 chr2L 14051270 14051300 -8960244 + (CTG)n Simple_repeat Simple_repeat 3 32 0 6 692 180 0 0 0 chr2L 14052299 14052319 -8959225 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 6 692 189 74 0 0 chr2L 14052433 14052460 -8959084 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 692 213 39 0 0 chr2L 14054383 14054409 -8957135 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 692 24 0 0 0 chr2L 14057773 14057797 -8953747 + AT_rich Low_complexity Low_complexity 1 24 0 6 692 198 176 0 0 chr2L 14061683 14061734 -8949810 + (CAG)n Simple_repeat Simple_repeat 3 53 0 6 692 363 96 0 0 chr2L 14062497 14062549 -8948995 + (CAG)n Simple_repeat Simple_repeat 2 53 0 6 692 29 0 0 0 chr2L 14063915 14063944 -8947600 + AT_rich Low_complexity Low_complexity 1 29 0 6 692 206 274 0 0 chr2L 14064255 14064306 -8947238 + (CAG)n Simple_repeat Simple_repeat 3 53 0 6 692 22 35 0 0 chr2L 14066236 14066265 -8945279 + AT_rich Low_complexity Low_complexity 1 29 0 6 692 273 98 0 0 chr2L 14068289 14068330 -8943214 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 692 204 185 0 0 chr2L 14069632 14069686 -8941858 + (CGGT)n Simple_repeat Simple_repeat 1 54 0 6 692 22 0 0 0 chr2L 14073843 14073865 -8937679 + AT_rich Low_complexity Low_complexity 1 22 0 6 692 231 36 0 0 chr2L 14075209 14075237 -8936307 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 692 25 65 0 0 chr2L 14078460 14078506 -8933038 + AT_rich Low_complexity Low_complexity 1 46 0 6 692 185 108 27 0 chr2L 14083394 14083431 -8928113 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 692 253 159 28 28 chr2L 14083584 14083655 -8927889 + (CCAA)n Simple_repeat Simple_repeat 1 71 0 6 692 23 0 0 0 chr2L 14084144 14084167 -8927377 + AT_rich Low_complexity Low_complexity 1 23 0 6 692 207 227 0 22 chr2L 14086551 14086596 -8924948 + A-rich Low_complexity Low_complexity 2 45 0 6 692 212 204 19 0 chr2L 14087386 14087440 -8924104 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 6 692 26 50 0 0 chr2L 14089290 14089330 -8922214 + AT_rich Low_complexity Low_complexity 1 40 0 6 692 180 135 0 0 chr2L 14089427 14089464 -8922080 + (A)n Simple_repeat Simple_repeat 1 37 0 6 692 188 67 0 32 chr2L 14089710 14089741 -8921803 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 692 244 259 0 0 chr2L 14092654 14092708 -8918836 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 692 183 42 0 0 chr2L 14092732 14092756 -8918788 + (TA)n Simple_repeat Simple_repeat 1 24 0 6 692 30 0 0 0 chr2L 14093016 14093046 -8918498 + AT_rich Low_complexity Low_complexity 1 30 0 6 692 26 30 0 0 chr2L 14093303 14093336 -8918208 + AT_rich Low_complexity Low_complexity 1 33 0 6 692 219 188 0 0 chr2L 14095830 14095878 -8915666 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 692 233 222 81 27 chr2L 14095880 14095991 -8915553 - ROO_I LTR Pao -7518 738 622 6 692 294 106 0 0 chr2L 14097396 14097443 -8914101 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 692 29 28 0 0 chr2L 14099417 14099453 -8912091 + AT_rich Low_complexity Low_complexity 1 36 0 6 692 183 162 0 0 chr2L 14100008 14100045 -8911499 + (CTG)n Simple_repeat Simple_repeat 1 37 0 6 692 27 0 0 0 chr2L 14100415 14100442 -8911102 + AT_rich Low_complexity Low_complexity 1 27 0 6 692 219 36 0 0 chr2L 14100563 14100591 -8910953 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 692 195 239 0 0 chr2L 14100791 14100858 -8910686 + (CAA)n Simple_repeat Simple_repeat 3 69 0 6 692 22 0 0 0 chr2L 14107544 14107566 -8903978 + AT_rich Low_complexity Low_complexity 1 22 0 6 692 189 0 0 0 chr2L 14107924 14107945 -8903599 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 692 182 37 0 36 chr2L 14110786 14110814 -8900730 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 692 24 32 0 0 chr2L 14110948 14110979 -8900565 + AT_rich Low_complexity Low_complexity 1 31 0 6 692 231 36 0 0 chr2L 14113600 14113628 -8897916 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 692 222 231 0 0 chr2L 14114074 14114126 -8897418 + A-rich Low_complexity Low_complexity 1 52 0 6 692 189 74 0 0 chr2L 14115304 14115331 -8896213 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 692 180 200 0 0 chr2L 14115522 14115572 -8895972 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 692 281 164 14 0 chr2L 14115945 14116018 -8895526 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 692 180 152 0 0 chr2L 14116310 14116343 -8895201 + (CGA)n Simple_repeat Simple_repeat 1 33 0 6 692 206 121 0 0 chr2L 14116395 14116428 -8895116 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 692 235 204 0 0 chr2L 14117380 14117429 -8894115 + CT-rich Low_complexity Low_complexity 1 49 0 6 692 204 158 0 0 chr2L 14118022 14118060 -8893484 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 692 289 263 10 10 chr2L 14118158 14118254 -8893290 + (CA)n Simple_repeat Simple_repeat 1 96 0 6 692 201 139 0 0 chr2L 14119178 14119221 -8892323 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 692 25 99 0 0 chr2L 14120276 14120357 -8891187 + AT_rich Low_complexity Low_complexity 1 81 0 6 692 21 0 0 0 chr2L 14121325 14121346 -8890198 + AT_rich Low_complexity Low_complexity 1 21 0 6 692 209 232 18 0 chr2L 14123506 14123562 -8887982 + CT-rich Low_complexity Low_complexity 1 57 0 6 692 200 200 0 0 chr2L 14124629 14124674 -8886870 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 692 198 143 0 0 chr2L 14126239 14126274 -8885270 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 692 21 57 0 0 chr2L 14128006 14128041 -8883503 + AT_rich Low_complexity Low_complexity 1 35 0 6 692 213 39 0 0 chr2L 14128759 14128785 -8882759 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 692 213 39 0 0 chr2L 14129217 14129243 -8882301 + (CTG)n Simple_repeat Simple_repeat 1 26 0 6 692 192 77 0 0 chr2L 14130582 14130608 -8880936 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 692 35 0 0 0 chr2L 14131512 14131547 -8879997 + AT_rich Low_complexity Low_complexity 1 35 0 6 692 234 0 0 0 chr2L 14133265 14133291 -8878253 + (CAACC)n Simple_repeat Simple_repeat 5 30 0 6 692 209 135 37 37 chr2L 14133577 14133631 -8877913 + (CACCC)n Simple_repeat Simple_repeat 5 58 0 6 692 215 237 0 17 chr2L 14136544 14136604 -8874940 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 692 220 27 54 0 chr2L 14136908 14136945 -8874599 + (CATTA)n Simple_repeat Simple_repeat 2 40 0 6 692 210 143 0 0 chr2L 14139593 14139628 -8871916 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 692 279 93 0 0 chr2L 14139807 14139850 -8871694 + (CTG)n Simple_repeat Simple_repeat 2 44 0 6 692 248 91 23 0 chr2L 14153543 14153587 -8857957 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 692 225 163 0 0 chr2L 14154948 14154997 -8856547 + (CATCC)n Simple_repeat Simple_repeat 5 53 0 6 692 243 0 0 0 chr2L 14155294 14155321 -8856223 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 693 21 0 0 0 chr2L 14156689 14156710 -8854834 + AT_rich Low_complexity Low_complexity 1 21 0 6 693 207 200 0 68 chr2L 14158214 14158273 -8853271 + G-rich Low_complexity Low_complexity 3 57 0 6 693 354 114 0 41 chr2L 14158817 14158890 -8852654 + ROO_I LTR Pao 665 734 -7522 6 693 28 0 0 0 chr2L 14159106 14159134 -8852410 + AT_rich Low_complexity Low_complexity 1 28 0 6 693 23 54 0 0 chr2L 14159910 14159947 -8851597 + AT_rich Low_complexity Low_complexity 1 37 0 6 693 25 65 0 0 chr2L 14160326 14160372 -8851172 + AT_rich Low_complexity Low_complexity 1 46 0 6 693 21 36 0 0 chr2L 14160625 14160653 -8850891 + AT_rich Low_complexity Low_complexity 1 28 0 6 693 21 0 0 0 chr2L 14164739 14164760 -8846784 + AT_rich Low_complexity Low_complexity 1 21 0 6 693 228 35 0 0 chr2L 14165293 14165322 -8846222 + (TGG)n Simple_repeat Simple_repeat 3 31 0 6 693 207 175 0 0 chr2L 14165389 14165429 -8846115 + (TGG)n Simple_repeat Simple_repeat 3 42 0 6 693 207 175 0 0 chr2L 14166361 14166401 -8845143 + (TCG)n Simple_repeat Simple_repeat 1 40 0 6 693 237 176 84 42 chr2L 14166984 14167055 -8844489 - Gypsy11_I LTR Gypsy -2936 588 515 6 693 219 36 0 0 chr2L 14167371 14167399 -8844145 + (CTG)n Simple_repeat Simple_repeat 1 28 0 6 693 205 178 0 0 chr2L 14167418 14167463 -8844081 + (CTG)n Simple_repeat Simple_repeat 3 47 0 6 693 22 35 0 0 chr2L 14175366 14175395 -8836149 + AT_rich Low_complexity Low_complexity 1 29 0 6 693 310 74 0 36 chr2L 14175826 14175882 -8835662 + (CAG)n Simple_repeat Simple_repeat 3 56 0 6 693 22 35 0 0 chr2L 14179707 14179736 -8831808 + AT_rich Low_complexity Low_complexity 1 29 0 6 693 24 0 0 0 chr2L 14181645 14181669 -8829875 + AT_rich Low_complexity Low_complexity 1 24 0 6 693 24 0 0 0 chr2L 14182741 14182765 -8828779 + AT_rich Low_complexity Low_complexity 1 24 0 6 693 237 98 0 0 chr2L 14193358 14193399 -8818145 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 693 21 0 0 0 chr2L 14196545 14196566 -8814978 + AT_rich Low_complexity Low_complexity 1 21 0 6 693 180 219 0 0 chr2L 14197091 14197132 -8814412 + (TTG)n Simple_repeat Simple_repeat 1 41 0 6 693 198 0 0 0 chr2L 14197974 14197996 -8813548 + (TAA)n Simple_repeat Simple_repeat 3 24 0 6 693 268 243 0 0 chr2L 14200498 14200568 -8810976 + A-rich Low_complexity Low_complexity 1 70 0 6 693 233 232 0 0 chr2L 14201856 14201912 -8809632 + A-rich Low_complexity Low_complexity 1 56 0 6 693 195 42 0 0 chr2L 14207787 14207811 -8803733 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 693 264 77 0 0 chr2L 14210319 14210358 -8801186 + (CACTC)n Simple_repeat Simple_repeat 4 42 0 6 693 22 0 0 0 chr2L 14213640 14213662 -8797882 + AT_rich Low_complexity Low_complexity 1 22 0 6 693 252 0 0 0 chr2L 14216456 14216484 -8795060 + (TTA)n Simple_repeat Simple_repeat 2 29 0 6 693 24 0 0 0 chr2L 14217147 14217171 -8794373 + AT_rich Low_complexity Low_complexity 1 24 0 6 693 210 171 0 0 chr2L 14218081 14218122 -8793422 + (TCG)n Simple_repeat Simple_repeat 3 43 0 6 693 22 0 0 0 chr2L 14218219 14218241 -8793303 + AT_rich Low_complexity Low_complexity 1 22 0 6 693 194 0 39 0 chr2L 14219227 14219253 -8792291 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 693 24 53 0 0 chr2L 14221963 14222001 -8789543 + AT_rich Low_complexity Low_complexity 1 38 0 6 693 217 207 47 16 chr2L 14223684 14223758 -8787786 + A-rich Low_complexity Low_complexity 1 76 0 6 693 198 150 0 0 chr2L 14224147 14224187 -8787357 + (T)n Simple_repeat Simple_repeat 1 40 0 6 693 24 0 0 0 chr2L 14224866 14224890 -8786654 + AT_rich Low_complexity Low_complexity 1 24 0 6 693 288 120 0 0 chr2L 14226789 14226839 -8784705 + (T)n Simple_repeat Simple_repeat 1 50 0 6 693 21 36 0 0 chr2L 14233320 14233348 -8778196 + AT_rich Low_complexity Low_complexity 1 28 0 6 693 235 237 0 0 chr2L 14234385 14234444 -8777100 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 693 38 0 0 0 chr2L 14235161 14235199 -8776345 + AT_rich Low_complexity Low_complexity 1 38 0 6 693 24 32 0 0 chr2L 14237035 14237066 -8774478 + AT_rich Low_complexity Low_complexity 1 31 0 6 693 21 36 0 0 chr2L 14239750 14239778 -8771766 + AT_rich Low_complexity Low_complexity 1 28 0 6 693 233 57 29 0 chr2L 14241323 14241358 -8770186 + (TTATA)n Simple_repeat Simple_repeat 5 40 0 6 693 28 0 0 0 chr2L 14241748 14241776 -8769768 + AT_rich Low_complexity Low_complexity 1 28 0 6 693 27 49 0 0 chr2L 14244843 14244884 -8766660 + AT_rich Low_complexity Low_complexity 1 41 0 6 693 27 49 0 0 chr2L 14244989 14245030 -8766514 + AT_rich Low_complexity Low_complexity 1 41 0 6 693 327 259 0 26 chr2L 14245215 14245330 -8766214 + (CAA)n Simple_repeat Simple_repeat 3 114 0 6 693 23 0 0 0 chr2L 14249795 14249818 -8761726 + AT_rich Low_complexity Low_complexity 1 23 0 6 693 23 33 0 0 chr2L 14251492 14251522 -8760022 + AT_rich Low_complexity Low_complexity 1 30 0 6 693 29 0 0 0 chr2L 14255662 14255691 -8755853 + AT_rich Low_complexity Low_complexity 1 29 0 6 693 21 0 0 0 chr2L 14256864 14256885 -8754659 + AT_rich Low_complexity Low_complexity 1 21 0 6 693 21 0 0 0 chr2L 14260032 14260053 -8751491 + AT_rich Low_complexity Low_complexity 1 21 0 6 693 234 0 0 0 chr2L 14264336 14264362 -8747182 + (T)n Simple_repeat Simple_repeat 1 26 0 6 693 22 56 0 0 chr2L 14265749 14265785 -8745759 + AT_rich Low_complexity Low_complexity 1 36 0 6 693 217 254 0 43 chr2L 14266401 14266471 -8745073 + T-rich Low_complexity Low_complexity 3 69 0 6 693 24 32 0 0 chr2L 14271519 14271550 -8739994 + AT_rich Low_complexity Low_complexity 1 31 0 6 693 204 111 0 0 chr2L 14273912 14273948 -8737596 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 6 693 201 39 0 0 chr2L 14274050 14274076 -8737468 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 6 693 21 57 0 0 chr2L 14280222 14280257 -8731287 + AT_rich Low_complexity Low_complexity 1 35 0 6 693 242 171 14 0 chr2L 14280864 14280934 -8730610 + (CAGT)n Simple_repeat Simple_repeat 1 71 0 6 693 23 0 0 0 chr2L 14281239 14281262 -8730282 + AT_rich Low_complexity Low_complexity 1 23 0 6 693 21 0 0 0 chr2L 14283815 14283836 -8727708 + AT_rich Low_complexity Low_complexity 1 21 0 6 694 34 0 0 0 chr2L 14287924 14287958 -8723586 + AT_rich Low_complexity Low_complexity 1 34 0 6 694 192 97 0 0 chr2L 14290527 14290558 -8720986 + (CAAGC)n Simple_repeat Simple_repeat 5 35 0 6 694 21 0 0 0 chr2L 14297199 14297220 -8714324 + AT_rich Low_complexity Low_complexity 1 21 0 6 694 21 0 0 0 chr2L 14298314 14298335 -8713209 + AT_rich Low_complexity Low_complexity 1 21 0 6 694 207 123 34 34 chr2L 14300495 14300554 -8710990 + (TTATA)n Simple_repeat Simple_repeat 4 62 0 6 694 22 70 0 0 chr2L 14301831 14301874 -8709670 + AT_rich Low_complexity Low_complexity 1 43 0 6 694 219 36 0 0 chr2L 14302964 14302992 -8708552 + (CATCG)n Simple_repeat Simple_repeat 1 28 0 6 694 180 125 0 0 chr2L 14304876 14304908 -8706636 + (TTTTTA)n Simple_repeat Simple_repeat 2 33 0 6 694 231 188 0 0 chr2L 14308326 14308374 -8703170 + (CAG)n Simple_repeat Simple_repeat 3 50 0 6 694 186 43 0 0 chr2L 14308834 14308857 -8702687 + (CAG)n Simple_repeat Simple_repeat 1 23 0 6 694 192 77 0 0 chr2L 14308987 14309013 -8702531 + (CAG)n Simple_repeat Simple_repeat 1 26 0 6 694 192 77 0 0 chr2L 14314579 14314605 -8696939 + (GATTG)n Simple_repeat Simple_repeat 1 26 0 6 694 25 65 0 0 chr2L 14315531 14315577 -8695967 + AT_rich Low_complexity Low_complexity 1 46 0 6 694 201 175 0 0 chr2L 14316935 14316975 -8694569 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 6 694 32 0 0 0 chr2L 14328272 14328304 -8683240 + AT_rich Low_complexity Low_complexity 1 32 0 6 694 50 59 0 0 chr2L 14333943 14334028 -8677516 + AT_rich Low_complexity Low_complexity 1 85 0 6 694 309 100 0 0 chr2L 14335096 14335146 -8676398 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 694 198 0 0 0 chr2L 14336198 14336220 -8675324 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 6 694 22 56 0 0 chr2L 14340767 14340803 -8670741 + AT_rich Low_complexity Low_complexity 1 36 0 6 694 28 48 0 0 chr2L 14345675 14345717 -8665827 + AT_rich Low_complexity Low_complexity 1 42 0 6 694 314 200 0 58 chr2L 14345798 14345867 -8665677 + DNAREP1_DM LINE Penelope 17 81 -513 6 694 21 36 0 0 chr2L 14350201 14350229 -8661315 + AT_rich Low_complexity Low_complexity 1 28 0 6 694 21 0 0 0 chr2L 14355951 14355972 -8655572 + AT_rich Low_complexity Low_complexity 1 21 0 6 694 21 0 0 0 chr2L 14358786 14358807 -8652737 + AT_rich Low_complexity Low_complexity 1 21 0 6 694 23 33 0 0 chr2L 14358880 14358910 -8652634 + AT_rich Low_complexity Low_complexity 1 30 0 6 694 24 32 0 0 chr2L 14361922 14361953 -8649591 + AT_rich Low_complexity Low_complexity 1 31 0 6 694 234 184 0 0 chr2L 14364320 14364369 -8647175 + T-rich Low_complexity Low_complexity 1 49 0 6 694 38 81 0 0 chr2L 14366882 14366969 -8644575 + AT_rich Low_complexity Low_complexity 1 87 0 6 694 22 56 0 0 chr2L 14367438 14367474 -8644070 + AT_rich Low_complexity Low_complexity 1 36 0 6 694 183 80 0 0 chr2L 14370311 14370336 -8641208 + (TTCCG)n Simple_repeat Simple_repeat 4 28 0 6 694 217 219 0 0 chr2L 14370452 14370493 -8641051 + (CGTG)n Simple_repeat Simple_repeat 2 42 0 6 694 248 294 0 0 chr2L 14374461 14374546 -8636998 + T-rich Low_complexity Low_complexity 1 85 0 6 694 250 105 0 0 chr2L 14376856 14376894 -8634650 - DNAREP1_DM LINE Penelope 0 594 557 6 694 481 231 0 0 chr2L 14377132 14377240 -8634304 - DNAREP1_DM LINE Penelope -486 108 1 6 694 189 154 0 0 chr2L 14382254 14382293 -8629251 + T-rich Low_complexity Low_complexity 1 39 0 6 694 22 35 0 0 chr2L 14383443 14383472 -8628072 + AT_rich Low_complexity Low_complexity 1 29 0 6 694 22 35 0 0 chr2L 14384865 14384894 -8626650 + AT_rich Low_complexity Low_complexity 1 29 0 6 694 300 27 0 0 chr2L 14385374 14385411 -8626133 + (TC)n Simple_repeat Simple_repeat 1 37 0 6 694 216 111 0 0 chr2L 14389730 14389766 -8621778 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 694 201 74 0 0 chr2L 14390186 14390213 -8621331 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 694 24 53 0 0 chr2L 14393870 14393908 -8617636 + AT_rich Low_complexity Low_complexity 1 38 0 6 694 183 42 0 0 chr2L 14396579 14396603 -8614941 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 694 213 154 0 0 chr2L 14398411 14398450 -8613094 + (CTG)n Simple_repeat Simple_repeat 3 41 0 6 694 23 86 0 0 chr2L 14401343 14401401 -8610143 + AT_rich Low_complexity Low_complexity 1 58 0 6 694 243 0 0 0 chr2L 14406081 14406108 -8605436 + (CAAAC)n Simple_repeat Simple_repeat 5 31 0 6 694 204 111 0 0 chr2L 14406257 14406293 -8605251 + (ACTG)n Simple_repeat Simple_repeat 1 36 0 6 694 23 33 0 0 chr2L 14406622 14406652 -8604892 + AT_rich Low_complexity Low_complexity 1 30 0 6 694 192 135 0 0 chr2L 14407364 14407401 -8604143 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 694 21 36 0 0 chr2L 14409384 14409412 -8602132 + AT_rich Low_complexity Low_complexity 1 28 0 6 694 28 48 0 0 chr2L 14410074 14410116 -8601428 + AT_rich Low_complexity Low_complexity 1 42 0 6 694 24 32 0 0 chr2L 14413504 14413535 -8598009 + AT_rich Low_complexity Low_complexity 1 31 0 6 694 28 0 0 0 chr2L 14415503 14415531 -8596013 + AT_rich Low_complexity Low_complexity 1 28 0 6 695 23 0 0 0 chr2L 14418419 14418442 -8593102 + AT_rich Low_complexity Low_complexity 1 23 0 6 695 21 36 0 0 chr2L 14422615 14422643 -8588901 + AT_rich Low_complexity Low_complexity 1 28 0 6 695 23 33 0 0 chr2L 14425409 14425439 -8586105 + AT_rich Low_complexity Low_complexity 1 30 0 6 695 211 296 28 14 chr2L 14425767 14425839 -8585705 + (CCCCAA)n Simple_repeat Simple_repeat 1 73 0 6 695 201 121 0 0 chr2L 14426921 14426954 -8584590 + (CAG)n Simple_repeat Simple_repeat 1 33 0 6 695 216 97 0 0 chr2L 14432384 14432415 -8579129 + (CAG)n Simple_repeat Simple_repeat 1 31 0 6 695 204 167 0 0 chr2L 14433049 14433097 -8578447 + (CAGT)n Simple_repeat Simple_repeat 4 51 0 6 695 201 132 0 0 chr2L 14437431 14437469 -8574075 + (CGAAA)n Simple_repeat Simple_repeat 1 38 0 6 695 22 56 0 0 chr2L 14440200 14440236 -8571308 + AT_rich Low_complexity Low_complexity 1 36 0 6 695 21 0 0 0 chr2L 14440686 14440707 -8570837 + AT_rich Low_complexity Low_complexity 1 21 0 6 695 270 56 0 0 chr2L 14442413 14442449 -8569095 + (TATG)n Simple_repeat Simple_repeat 1 36 0 6 695 22 0 0 0 chr2L 14443134 14443156 -8568388 + AT_rich Low_complexity Low_complexity 1 22 0 6 695 26 64 0 0 chr2L 14444573 14444620 -8566924 + AT_rich Low_complexity Low_complexity 1 47 0 6 695 24 32 0 0 chr2L 14452591 14452622 -8558922 + AT_rich Low_complexity Low_complexity 1 31 0 6 695 32 26 0 0 chr2L 14454983 14455022 -8556522 + AT_rich Low_complexity Low_complexity 1 39 0 6 695 300 111 0 0 chr2L 14455340 14455385 -8556159 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 6 695 189 0 0 0 chr2L 14456938 14456959 -8554585 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 695 228 135 0 0 chr2L 14457904 14457941 -8553603 + (TTG)n Simple_repeat Simple_repeat 1 37 0 6 695 201 132 53 0 chr2L 14458698 14458736 -8552808 + (ACTG)n Simple_repeat Simple_repeat 3 42 0 6 695 24 0 0 0 chr2L 14458991 14459015 -8552529 + AT_rich Low_complexity Low_complexity 1 24 0 6 695 210 71 0 0 chr2L 14461595 14461623 -8549921 + (AGCTG)n Simple_repeat Simple_repeat 5 32 0 6 695 27 0 0 0 chr2L 14462204 14462231 -8549313 + AT_rich Low_complexity Low_complexity 1 27 0 6 695 3600 7 12 0 chr2L 14465639 14466053 -8545491 - DOC LINE Jockey 0 4725 4307 6 695 12677 18 0 0 chr2L 14466053 14467488 -8544056 + M4DM DNA Transib 1 1435 0 6 695 14352 4 0 0 chr2L 14467488 14469047 -8542497 - DOC LINE Jockey -414 4311 2753 6 695 28 71 0 0 chr2L 14469459 14469515 -8542029 + AT_rich Low_complexity Low_complexity 1 56 0 6 695 32 67 0 0 chr2L 14470032 14470092 -8541452 + AT_rich Low_complexity Low_complexity 1 60 0 6 695 23 33 0 0 chr2L 14471388 14471418 -8540126 + AT_rich Low_complexity Low_complexity 1 30 0 6 695 228 122 0 0 chr2L 14472443 14472484 -8539060 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 695 189 0 0 0 chr2L 14474350 14474371 -8537173 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 695 213 108 0 0 chr2L 14474812 14474849 -8536695 + (CGATA)n Simple_repeat Simple_repeat 5 41 0 6 695 21 71 0 0 chr2L 14476492 14476534 -8535010 + AT_rich Low_complexity Low_complexity 1 42 0 6 695 213 214 24 0 chr2L 14477711 14477753 -8533791 + (TGG)n Simple_repeat Simple_repeat 2 44 0 6 695 24 53 0 0 chr2L 14480432 14480470 -8531074 + AT_rich Low_complexity Low_complexity 1 38 0 6 695 186 71 0 0 chr2L 14483224 14483252 -8528292 + (CGATG)n Simple_repeat Simple_repeat 5 32 0 6 695 29 0 0 0 chr2L 14484646 14484675 -8526869 + AT_rich Low_complexity Low_complexity 1 29 0 6 695 217 132 0 0 chr2L 14487786 14487824 -8523720 + (A)n Simple_repeat Simple_repeat 1 38 0 6 695 213 108 0 0 chr2L 14488440 14488477 -8523067 + (TTG)n Simple_repeat Simple_repeat 3 39 0 6 695 23 33 0 0 chr2L 14488936 14488966 -8522578 + AT_rich Low_complexity Low_complexity 1 30 0 6 695 206 111 0 53 chr2L 14492240 14492278 -8519266 + (CAG)n Simple_repeat Simple_repeat 2 37 0 6 695 36 62 0 0 chr2L 14493775 14493839 -8517705 + AT_rich Low_complexity Low_complexity 1 64 0 6 695 26 82 0 0 chr2L 14494331 14494392 -8517152 + AT_rich Low_complexity Low_complexity 1 61 0 6 695 234 260 0 0 chr2L 14494754 14494804 -8516740 + (TATG)n Simple_repeat Simple_repeat 2 51 0 6 695 21 0 0 0 chr2L 14496943 14496964 -8514580 + AT_rich Low_complexity Low_complexity 1 21 0 6 695 214 284 34 0 chr2L 14499632 14499720 -8511824 + (CAG)n Simple_repeat Simple_repeat 1 91 0 6 695 256 0 0 0 chr2L 14500575 14500603 -8510941 + TC1_DM DNA Tc1 1 28 -1638 6 695 282 169 0 0 chr2L 14508809 14508874 -8502670 + (CAACT)n Simple_repeat Simple_repeat 5 69 0 6 695 216 67 0 0 chr2L 14509040 14509070 -8502474 + (GA)n Simple_repeat Simple_repeat 2 31 0 6 695 28 0 0 0 chr2L 14509403 14509431 -8502113 + AT_rich Low_complexity Low_complexity 1 28 0 6 695 287 152 0 0 chr2L 14510967 14511026 -8500518 + ROO_I LTR Pao 673 731 -7525 6 695 357 82 0 0 chr2L 14511159 14511208 -8500336 + (CAG)n Simple_repeat Simple_repeat 1 49 0 6 695 252 86 0 0 chr2L 14511468 14511503 -8500041 + (CAG)n Simple_repeat Simple_repeat 1 35 0 6 695 189 107 0 0 chr2L 14511669 14511697 -8499847 + (T)n Simple_repeat Simple_repeat 1 28 0 6 695 186 103 0 0 chr2L 14512116 14512145 -8499399 + (ACTG)n Simple_repeat Simple_repeat 4 32 0 6 695 25 0 0 0 chr2L 14515739 14515764 -8495780 + AT_rich Low_complexity Low_complexity 1 25 0 6 695 22 0 0 0 chr2L 14516123 14516145 -8495399 + AT_rich Low_complexity Low_complexity 1 22 0 6 695 21 71 0 0 chr2L 14517940 14517982 -8493562 + AT_rich Low_complexity Low_complexity 1 42 0 6 695 25 51 0 0 chr2L 14518268 14518307 -8493237 + AT_rich Low_complexity Low_complexity 1 39 0 6 695 21 0 0 0 chr2L 14522305 14522326 -8489218 + AT_rich Low_complexity Low_complexity 1 21 0 6 695 23 86 0 0 chr2L 14524789 14524847 -8486697 + AT_rich Low_complexity Low_complexity 1 58 0 6 695 22 0 0 0 chr2L 14526676 14526698 -8484846 + AT_rich Low_complexity Low_complexity 1 22 0 6 695 218 0 94 0 chr2L 14526959 14526991 -8484553 + (TATAA)n Simple_repeat Simple_repeat 2 36 0 6 695 23 0 0 0 chr2L 14527076 14527099 -8484445 + AT_rich Low_complexity Low_complexity 1 23 0 6 695 309 149 0 0 chr2L 14527563 14527630 -8483914 + (ACTG)n Simple_repeat Simple_repeat 4 70 0 6 695 201 196 0 0 chr2L 14528532 14528578 -8482966 + (ACTG)n Simple_repeat Simple_repeat 1 46 0 6 695 23 33 0 0 chr2L 14528766 14528796 -8482748 + AT_rich Low_complexity Low_complexity 1 30 0 6 695 207 100 0 0 chr2L 14533269 14533299 -8478245 + (ACTG)n Simple_repeat Simple_repeat 3 32 0 6 695 216 111 0 0 chr2L 14534092 14534128 -8477416 + (A)n Simple_repeat Simple_repeat 1 36 0 6 695 22 56 0 0 chr2L 14539040 14539076 -8472468 + AT_rich Low_complexity Low_complexity 1 36 0 6 695 205 161 0 0 chr2L 14540473 14540504 -8471040 + (CTG)n Simple_repeat Simple_repeat 1 31 0 6 696 24 67 0 0 chr2L 14559772 14559817 -8451727 + AT_rich Low_complexity Low_complexity 1 45 0 6 696 192 77 0 0 chr2L 14560662 14560688 -8450856 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 696 243 0 0 0 chr2L 14560946 14560973 -8450571 + (AACTG)n Simple_repeat Simple_repeat 5 31 0 6 696 21 0 0 0 chr2L 14564792 14564813 -8446731 + AT_rich Low_complexity Low_complexity 1 21 0 6 696 21 0 0 0 chr2L 14564838 14564859 -8446685 + AT_rich Low_complexity Low_complexity 1 21 0 6 696 22 35 0 0 chr2L 14565761 14565790 -8445754 + AT_rich Low_complexity Low_complexity 1 29 0 6 696 27 0 0 0 chr2L 14565880 14565907 -8445637 + AT_rich Low_complexity Low_complexity 1 27 0 6 696 32 0 0 0 chr2L 14566230 14566262 -8445282 + AT_rich Low_complexity Low_complexity 1 32 0 6 696 207 146 0 0 chr2L 14569030 14569071 -8442473 + (AGTTG)n Simple_repeat Simple_repeat 1 41 0 6 696 22 0 0 0 chr2L 14570742 14570764 -8440780 + AT_rich Low_complexity Low_complexity 1 22 0 6 696 243 88 0 0 chr2L 14571008 14571042 -8440502 + (CAAT)n Simple_repeat Simple_repeat 1 34 0 6 696 21 0 0 0 chr2L 14571364 14571385 -8440159 + AT_rich Low_complexity Low_complexity 1 21 0 6 696 195 69 0 0 chr2L 14571480 14571509 -8440035 + (TCCA)n Simple_repeat Simple_repeat 2 30 0 6 696 207 100 0 0 chr2L 14571827 14571857 -8439687 + (CAG)n Simple_repeat Simple_repeat 3 32 0 6 696 23 54 0 0 chr2L 14573324 14573361 -8438183 + AT_rich Low_complexity Low_complexity 1 37 0 6 696 28 29 0 0 chr2L 14574254 14574289 -8437255 + AT_rich Low_complexity Low_complexity 1 35 0 6 696 30 77 0 0 chr2L 14576365 14576430 -8435114 + AT_rich Low_complexity Low_complexity 1 65 0 6 696 246 81 0 0 chr2L 14576756 14576793 -8434751 + (CGAGT)n Simple_repeat Simple_repeat 3 39 0 6 696 203 236 0 0 chr2L 14579208 14579263 -8432281 + (TGGG)n Simple_repeat Simple_repeat 3 57 0 6 696 23 33 0 0 chr2L 14580665 14580695 -8430849 + AT_rich Low_complexity Low_complexity 1 30 0 6 696 21 57 0 0 chr2L 14580862 14580897 -8430647 + AT_rich Low_complexity Low_complexity 1 35 0 6 696 23 0 0 0 chr2L 14581281 14581304 -8430240 + AT_rich Low_complexity Low_complexity 1 23 0 6 696 35 0 0 0 chr2L 14582236 14582271 -8429273 + AT_rich Low_complexity Low_complexity 1 35 0 6 696 204 233 0 0 chr2L 14582471 14582514 -8429030 + (TTG)n Simple_repeat Simple_repeat 3 45 0 6 696 29 60 0 0 chr2L 14583831 14583881 -8427663 + AT_rich Low_complexity Low_complexity 1 50 0 6 696 270 0 0 0 chr2L 14585878 14585908 -8425636 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 6 696 32 26 0 0 chr2L 14586851 14586890 -8424654 + AT_rich Low_complexity Low_complexity 1 39 0 6 696 288 136 0 0 chr2L 14587826 14587870 -8423674 + DNAREP1_DM LINE Penelope 375 418 -176 6 696 226 220 0 20 chr2L 14592714 14592765 -8418779 + (CAG)n Simple_repeat Simple_repeat 3 52 0 6 696 22 0 0 0 chr2L 14595913 14595935 -8415609 + AT_rich Low_complexity Low_complexity 1 22 0 6 696 23 0 0 0 chr2L 14595942 14595965 -8415579 + AT_rich Low_complexity Low_complexity 1 23 0 6 696 200 35 35 0 chr2L 14596193 14596222 -8415322 + (CTG)n Simple_repeat Simple_repeat 3 32 0 6 696 264 294 0 21 chr2L 14596379 14596473 -8415071 + (CTG)n Simple_repeat Simple_repeat 3 94 0 6 696 39 22 0 0 chr2L 14600536 14600582 -8410962 + AT_rich Low_complexity Low_complexity 1 46 0 6 696 195 100 0 0 chr2L 14600772 14600802 -8410742 + (TTG)n Simple_repeat Simple_repeat 2 31 0 6 696 226 237 0 0 chr2L 14601397 14601456 -8410088 + (TTG)n Simple_repeat Simple_repeat 3 61 0 6 696 208 0 30 30 chr2L 14601492 14601525 -8410019 + (TTGTG)n Simple_repeat Simple_repeat 4 36 0 6 696 25 31 0 0 chr2L 14602505 14602537 -8409007 + AT_rich Low_complexity Low_complexity 1 32 0 6 696 22 0 0 0 chr2L 14605815 14605837 -8405707 + AT_rich Low_complexity Low_complexity 1 22 0 6 696 22 0 0 0 chr2L 14606753 14606775 -8404769 + AT_rich Low_complexity Low_complexity 1 22 0 6 696 29 70 0 0 chr2L 14611362 14611419 -8400125 + AT_rich Low_complexity Low_complexity 1 57 0 6 696 22 0 0 0 chr2L 14611936 14611958 -8399586 + AT_rich Low_complexity Low_complexity 1 22 0 6 696 26 50 0 0 chr2L 14614624 14614664 -8396880 + AT_rich Low_complexity Low_complexity 1 40 0 6 696 26 0 0 0 chr2L 14614708 14614734 -8396810 + AT_rich Low_complexity Low_complexity 1 26 0 6 696 234 0 0 0 chr2L 14618910 14618936 -8392608 + (T)n Simple_repeat Simple_repeat 1 26 0 6 696 2891 6 52 3 chr2L 14618936 14619298 -8392246 - LINEJ1_DM LINE Jockey 0 5020 4641 6 696 21 0 0 0 chr2L 14623166 14623187 -8388357 + AT_rich Low_complexity Low_complexity 1 21 0 6 696 267 195 34 11 chr2L 14623800 14623888 -8387656 + ROO_I LTR Pao 643 732 -7524 6 696 32 26 0 0 chr2L 14624483 14624522 -8387022 + AT_rich Low_complexity Low_complexity 1 39 0 6 696 21 0 0 0 chr2L 14624551 14624572 -8386972 + AT_rich Low_complexity Low_complexity 1 21 0 6 696 23 0 0 0 chr2L 14624737 14624760 -8386784 + AT_rich Low_complexity Low_complexity 1 23 0 6 696 23 33 0 0 chr2L 14626278 14626308 -8385236 + AT_rich Low_complexity Low_complexity 1 30 0 6 696 189 0 0 0 chr2L 14626520 14626541 -8385003 + (TGGA)n Simple_repeat Simple_repeat 4 24 0 6 696 291 54 0 0 chr2L 14627577 14627614 -8383930 + (CAGA)n Simple_repeat Simple_repeat 3 39 0 6 696 192 125 0 0 chr2L 14631339 14631371 -8380173 + (CAG)n Simple_repeat Simple_repeat 3 34 0 6 696 22 0 0 0 chr2L 14632603 14632625 -8378919 + AT_rich Low_complexity Low_complexity 1 22 0 6 696 21 0 0 0 chr2L 14634327 14634348 -8377196 + AT_rich Low_complexity Low_complexity 1 21 0 6 696 32 57 0 0 chr2L 14635157 14635210 -8376334 + AT_rich Low_complexity Low_complexity 1 53 0 6 696 22 35 0 0 chr2L 14636472 14636501 -8375043 + AT_rich Low_complexity Low_complexity 1 29 0 6 696 27 29 0 0 chr2L 14641164 14641198 -8370346 + AT_rich Low_complexity Low_complexity 1 34 0 6 696 31 92 0 0 chr2L 14642100 14642187 -8369357 + AT_rich Low_complexity Low_complexity 1 87 0 6 696 3766 0 0 0 chr2L 14642625 14643053 -8368491 - ROO_LTR LTR Pao 0 428 1 6 696 70384 0 1 0 chr2L 14643053 14651302 -8360242 - ROO_I LTR Pao 0 8256 1 6 696 3766 0 0 0 chr2L 14651302 14651730 -8359814 - ROO_LTR LTR Pao 0 428 1 6 696 213 39 0 0 chr2L 14653386 14653412 -8358132 + (TTTTTA)n Simple_repeat Simple_repeat 5 30 0 6 696 237 108 0 0 chr2L 14654332 14654369 -8357175 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 6 696 23 54 0 0 chr2L 14654795 14654832 -8356712 + AT_rich Low_complexity Low_complexity 1 37 0 6 696 28 29 0 0 chr2L 14658708 14658743 -8352801 + AT_rich Low_complexity Low_complexity 1 35 0 6 696 29 0 0 0 chr2L 14661214 14661243 -8350301 + AT_rich Low_complexity Low_complexity 1 29 0 6 696 21 36 0 0 chr2L 14664429 14664457 -8347087 + AT_rich Low_complexity Low_complexity 1 28 0 6 696 223 178 22 0 chr2L 14666074 14666119 -8345425 + (GAGTG)n Simple_repeat Simple_repeat 5 50 0 6 696 183 42 0 0 chr2L 14667204 14667228 -8344316 + (T)n Simple_repeat Simple_repeat 1 24 0 6 696 21 36 0 0 chr2L 14668094 14668122 -8343422 + AT_rich Low_complexity Low_complexity 1 28 0 6 696 29 28 0 0 chr2L 14668389 14668425 -8343119 + AT_rich Low_complexity Low_complexity 1 36 0 6 696 224 143 0 18 chr2L 14669065 14669122 -8342422 + (CAGT)n Simple_repeat Simple_repeat 4 59 0 6 696 31 44 0 0 chr2L 14672009 14672054 -8339490 + AT_rich Low_complexity Low_complexity 1 45 0 6 696 197 108 27 0 chr2L 14674616 14674653 -8336891 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 696 23 0 0 0 chr2L 14674854 14674877 -8336667 + AT_rich Low_complexity Low_complexity 1 23 0 6 696 23 33 0 0 chr2L 14674930 14674960 -8336584 + AT_rich Low_complexity Low_complexity 1 30 0 6 696 21 0 0 0 chr2L 14675419 14675440 -8336104 + AT_rich Low_complexity Low_complexity 1 21 0 6 696 25 0 0 0 chr2L 14676049 14676074 -8335470 + AT_rich Low_complexity Low_complexity 1 25 0 6 696 24 53 0 0 chr2L 14676532 14676570 -8334974 + AT_rich Low_complexity Low_complexity 1 38 0 6 696 435 63 0 0 chr2L 14678793 14678856 -8332688 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 696 204 159 22 22 chr2L 14679841 14679886 -8331658 + (ACTCG)n Simple_repeat Simple_repeat 4 48 0 6 697 21 0 0 0 chr2L 14682868 14682889 -8328655 + AT_rich Low_complexity Low_complexity 1 21 0 6 697 228 35 0 0 chr2L 14684794 14684823 -8326721 + (T)n Simple_repeat Simple_repeat 1 29 0 6 697 27 62 0 0 chr2L 14686837 14686885 -8324659 + AT_rich Low_complexity Low_complexity 1 48 0 6 697 205 312 12 0 chr2L 14689051 14689131 -8322413 + (CA)n Simple_repeat Simple_repeat 1 81 0 6 697 30 0 0 0 chr2L 14690082 14690112 -8321432 + AT_rich Low_complexity Low_complexity 1 30 0 6 697 22 80 0 0 chr2L 14691437 14691487 -8320057 + AT_rich Low_complexity Low_complexity 1 50 0 6 697 255 261 77 0 chr2L 14695341 14695406 -8316138 + DNAREP1_DM LINE Penelope 1 70 -524 6 697 36 40 0 0 chr2L 14695720 14695770 -8315774 + AT_rich Low_complexity Low_complexity 1 50 0 6 697 26 50 0 0 chr2L 14698624 14698664 -8312880 + AT_rich Low_complexity Low_complexity 1 40 0 6 697 29 0 0 0 chr2L 14699334 14699363 -8312181 + AT_rich Low_complexity Low_complexity 1 29 0 6 697 189 159 0 0 chr2L 14699980 14700024 -8311520 + T-rich Low_complexity Low_complexity 3 46 0 6 697 23 86 0 0 chr2L 14704486 14704544 -8307000 + AT_rich Low_complexity Low_complexity 1 58 0 6 697 21 0 0 0 chr2L 14709361 14709382 -8302162 + AT_rich Low_complexity Low_complexity 1 21 0 6 697 22 0 0 0 chr2L 14713075 14713097 -8298447 + AT_rich Low_complexity Low_complexity 1 22 0 6 697 25 0 0 0 chr2L 14713286 14713311 -8298233 + AT_rich Low_complexity Low_complexity 1 25 0 6 697 241 169 33 33 chr2L 14714026 14714087 -8297457 + ROO_I LTR Pao 652 712 -7544 6 697 241 167 0 53 chr2L 14714138 14714195 -8297349 + (CAG)n Simple_repeat Simple_repeat 1 54 0 6 697 21 0 0 0 chr2L 14714318 14714339 -8297205 + AT_rich Low_complexity Low_complexity 1 21 0 6 697 251 130 0 18 chr2L 14715113 14715168 -8296376 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 697 26 0 0 0 chr2L 14718017 14718043 -8293501 + AT_rich Low_complexity Low_complexity 1 26 0 6 697 208 147 0 0 chr2L 14720008 14720042 -8291502 + (TA)n Simple_repeat Simple_repeat 1 34 0 6 697 23 0 0 0 chr2L 14723165 14723188 -8288356 + AT_rich Low_complexity Low_complexity 1 23 0 6 697 29 0 0 0 chr2L 14724025 14724054 -8287490 + AT_rich Low_complexity Low_complexity 1 29 0 6 697 28 48 0 0 chr2L 14724586 14724628 -8286916 + AT_rich Low_complexity Low_complexity 1 42 0 6 697 27 29 0 0 chr2L 14726628 14726662 -8284882 + AT_rich Low_complexity Low_complexity 1 34 0 6 697 23 54 0 0 chr2L 14728707 14728744 -8282800 + AT_rich Low_complexity Low_complexity 1 37 0 6 697 26 50 0 0 chr2L 14731093 14731133 -8280411 + AT_rich Low_complexity Low_complexity 1 40 0 6 697 35 24 0 0 chr2L 14737233 14737275 -8274269 + AT_rich Low_complexity Low_complexity 1 42 0 6 697 276 233 0 0 chr2L 14738253 14738313 -8273231 + DNAREP1_DM LINE Penelope 2 61 -533 6 697 463 264 50 12 chr2L 14738451 14738612 -8272932 + DNAREP1_DM LINE Penelope 428 594 0 6 697 35 24 0 0 chr2L 14741304 14741346 -8270198 + AT_rich Low_complexity Low_complexity 1 42 0 6 697 276 233 0 0 chr2L 14742324 14742384 -8269160 + DNAREP1_DM LINE Penelope 2 61 -533 6 697 463 264 50 12 chr2L 14742522 14742683 -8268861 + DNAREP1_DM LINE Penelope 428 594 0 6 697 263 26 51 0 chr2L 14743830 14743869 -8267675 + (TTATA)n Simple_repeat Simple_repeat 2 42 0 6 697 645 183 76 25 chr2L 14743891 14744048 -8267496 + DNAREP1_DM LINE Penelope 293 457 -137 6 697 407 231 10 0 chr2L 14747220 14747324 -8264220 + DNAREP1_DM LINE Penelope 445 549 -45 6 697 201 39 0 0 chr2L 14748295 14748321 -8263223 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 697 182 37 0 36 chr2L 14748460 14748488 -8263056 + (CACTC)n Simple_repeat Simple_repeat 5 31 0 6 697 37 39 0 0 chr2L 14750990 14751041 -8260503 + AT_rich Low_complexity Low_complexity 1 51 0 6 697 21 0 0 0 chr2L 14752595 14752616 -8258928 + AT_rich Low_complexity Low_complexity 1 21 0 6 697 202 225 0 0 chr2L 14754075 14754115 -8257429 + (CTG)n Simple_repeat Simple_repeat 1 40 0 6 697 27 0 0 0 chr2L 14754481 14754508 -8257036 + AT_rich Low_complexity Low_complexity 1 27 0 6 697 24 0 0 0 chr2L 14756959 14756983 -8254561 + AT_rich Low_complexity Low_complexity 1 24 0 6 697 25 51 0 0 chr2L 14758594 14758633 -8252911 + AT_rich Low_complexity Low_complexity 1 39 0 6 697 21 89 0 0 chr2L 14759328 14759384 -8252160 + AT_rich Low_complexity Low_complexity 1 56 0 6 697 21 0 0 0 chr2L 14764239 14764260 -8247284 + AT_rich Low_complexity Low_complexity 1 21 0 6 697 27 0 0 0 chr2L 14767275 14767302 -8244242 + AT_rich Low_complexity Low_complexity 1 27 0 6 697 21 36 0 0 chr2L 14768049 14768077 -8243467 + AT_rich Low_complexity Low_complexity 1 28 0 6 697 21 36 0 0 chr2L 14776878 14776906 -8234638 + AT_rich Low_complexity Low_complexity 1 28 0 6 697 28 0 0 0 chr2L 14777164 14777192 -8234352 + AT_rich Low_complexity Low_complexity 1 28 0 6 697 27 29 0 0 chr2L 14778323 14778357 -8233187 + AT_rich Low_complexity Low_complexity 1 34 0 6 697 22 0 0 0 chr2L 14780683 14780705 -8230839 + AT_rich Low_complexity Low_complexity 1 22 0 6 697 242 224 118 0 chr2L 14784745 14784821 -8226723 - DNAREP1_DM LINE Penelope -79 515 431 6 697 23 0 0 0 chr2L 14788256 14788279 -8223265 + AT_rich Low_complexity Low_complexity 1 23 0 7 697 261 139 0 0 chr2L 14788643 14788686 -8222858 + (TA)n Simple_repeat Simple_repeat 2 44 0 7 697 26 64 0 0 chr2L 14789304 14789351 -8222193 + AT_rich Low_complexity Low_complexity 1 47 0 7 697 24 53 0 0 chr2L 14791652 14791690 -8219854 + AT_rich Low_complexity Low_complexity 1 38 0 7 697 26 64 0 0 chr2L 14792551 14792598 -8218946 + AT_rich Low_complexity Low_complexity 1 47 0 7 697 21 36 0 0 chr2L 14794396 14794424 -8217120 + AT_rich Low_complexity Low_complexity 1 28 0 7 697 36 53 0 0 chr2L 14798136 14798193 -8213351 + AT_rich Low_complexity Low_complexity 1 57 0 7 697 200 208 0 20 chr2L 14799829 14799878 -8211666 + (CTG)n Simple_repeat Simple_repeat 3 50 0 7 697 2297 0 0 0 chr2L 14803934 14804210 -8207334 - Copia_LTR LTR Copia 0 276 1 7 697 39288 1 0 0 chr2L 14804210 14808803 -8202741 - Copia_I LTR Copia 0 4593 1 7 697 2297 0 0 0 chr2L 14808803 14809079 -8202465 - Copia_LTR LTR Copia 0 276 1 7 698 23 33 0 0 chr2L 14814203 14814233 -8197311 + AT_rich Low_complexity Low_complexity 1 30 0 7 698 25 0 0 0 chr2L 14815688 14815713 -8195831 + AT_rich Low_complexity Low_complexity 1 25 0 7 698 186 150 0 0 chr2L 14815942 14815982 -8195562 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 698 201 192 39 0 chr2L 14819255 14819307 -8192237 + (TGGG)n Simple_repeat Simple_repeat 4 57 0 7 698 36 0 0 0 chr2L 14820166 14820202 -8191342 + AT_rich Low_complexity Low_complexity 1 36 0 7 698 21 0 0 0 chr2L 14822189 14822210 -8189334 + AT_rich Low_complexity Low_complexity 1 21 0 7 698 22 70 0 0 chr2L 14822795 14822838 -8188706 + AT_rich Low_complexity Low_complexity 1 43 0 7 698 23 0 0 0 chr2L 14823386 14823409 -8188135 + AT_rich Low_complexity Low_complexity 1 23 0 7 698 26 0 0 0 chr2L 14824674 14824700 -8186844 + AT_rich Low_complexity Low_complexity 1 26 0 7 698 21 0 0 0 chr2L 14827819 14827840 -8183704 + AT_rich Low_complexity Low_complexity 1 21 0 7 698 35 41 0 0 chr2L 14834821 14834870 -8176674 + AT_rich Low_complexity Low_complexity 1 49 0 7 698 214 200 0 0 chr2L 14835712 14835752 -8175792 + (CAA)n Simple_repeat Simple_repeat 3 42 0 7 698 30 59 0 0 chr2L 14835973 14836024 -8175520 + AT_rich Low_complexity Low_complexity 1 51 0 7 698 195 100 0 0 chr2L 14837999 14838029 -8173515 + (CAGC)n Simple_repeat Simple_repeat 2 31 0 7 698 21 36 0 0 chr2L 14840134 14840162 -8171382 + AT_rich Low_complexity Low_complexity 1 28 0 7 698 24 32 0 0 chr2L 14840283 14840314 -8171230 + AT_rich Low_complexity Low_complexity 1 31 0 7 698 23 0 0 0 chr2L 14843103 14843126 -8168418 + AT_rich Low_complexity Low_complexity 1 23 0 7 698 386 36 36 0 chr2L 14844506 14844561 -8166983 - BARI1 DNA Tc1 -1656 94 38 7 698 33 25 0 0 chr2L 14851106 14851146 -8160398 + AT_rich Low_complexity Low_complexity 1 40 0 7 698 21 71 0 0 chr2L 14857197 14857239 -8154305 + AT_rich Low_complexity Low_complexity 1 42 0 7 698 25 65 0 0 chr2L 14859334 14859380 -8152164 + AT_rich Low_complexity Low_complexity 1 46 0 7 698 25 51 0 0 chr2L 14863401 14863440 -8148104 + AT_rich Low_complexity Low_complexity 1 39 0 7 698 196 30 61 0 chr2L 14864399 14864432 -8147112 + (CTATA)n Simple_repeat Simple_repeat 4 38 0 7 698 204 125 0 0 chr2L 14864890 14864922 -8146622 + (CAA)n Simple_repeat Simple_repeat 3 34 0 7 698 186 43 0 0 chr2L 14867635 14867658 -8143886 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 7 698 60 15 0 0 chr2L 14868054 14868121 -8143423 + AT_rich Low_complexity Low_complexity 1 67 0 7 698 26 0 0 0 chr2L 14868397 14868423 -8143121 + AT_rich Low_complexity Low_complexity 1 26 0 7 698 23 68 0 0 chr2L 14870780 14870824 -8140720 + AT_rich Low_complexity Low_complexity 1 44 0 7 698 39 22 0 0 chr2L 14871501 14871547 -8139997 + AT_rich Low_complexity Low_complexity 1 46 0 7 698 21 0 0 0 chr2L 14872512 14872533 -8139011 + AT_rich Low_complexity Low_complexity 1 21 0 7 698 21 0 0 0 chr2L 14874186 14874207 -8137337 + AT_rich Low_complexity Low_complexity 1 21 0 7 698 249 139 0 0 chr2L 14875289 14875332 -8136212 + (CTG)n Simple_repeat Simple_repeat 2 44 0 7 698 21 0 0 0 chr2L 14876740 14876761 -8134783 + AT_rich Low_complexity Low_complexity 1 21 0 7 698 241 261 11 54 chr2L 14876844 14876937 -8134607 + (CAA)n Simple_repeat Simple_repeat 2 90 0 7 698 216 0 0 0 chr2L 14877918 14877942 -8133602 + (T)n Simple_repeat Simple_repeat 1 24 0 7 698 27 0 0 0 chr2L 14878050 14878077 -8133467 + AT_rich Low_complexity Low_complexity 1 27 0 7 698 180 184 0 0 chr2L 14880707 14880756 -8130788 + (CAG)n Simple_repeat Simple_repeat 3 51 0 7 698 576 111 622 24 chr2L 14884838 14885053 -8126491 + DNAREP1_DM LINE Penelope 187 529 -65 7 698 21 57 0 0 chr2L 14886663 14886698 -8124846 + AT_rich Low_complexity Low_complexity 1 35 0 7 698 25 0 0 0 chr2L 14886861 14886886 -8124658 + AT_rich Low_complexity Low_complexity 1 25 0 7 698 22 70 0 0 chr2L 14887722 14887765 -8123779 + AT_rich Low_complexity Low_complexity 1 43 0 7 698 29 84 0 0 chr2L 14888384 14888455 -8123089 + AT_rich Low_complexity Low_complexity 1 71 0 7 698 3152 3 0 3 chr2L 14890022 14890375 -8121169 - LINEJ1_DM LINE Jockey 0 5020 4669 7 698 225 0 0 0 chr2L 14893446 14893471 -8118073 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 698 26 30 0 0 chr2L 14894132 14894165 -8117379 + AT_rich Low_complexity Low_complexity 1 33 0 7 698 23 0 0 0 chr2L 14897979 14898002 -8113542 + AT_rich Low_complexity Low_complexity 1 23 0 7 698 227 89 0 62 chr2L 14898520 14898568 -8112976 + T-rich Low_complexity Low_complexity 1 45 0 7 698 21 36 0 0 chr2L 14900101 14900129 -8111415 + AT_rich Low_complexity Low_complexity 1 28 0 7 698 180 77 0 0 chr2L 14901591 14901617 -8109927 + (CATA)n Simple_repeat Simple_repeat 4 29 0 7 698 23 33 0 0 chr2L 14902332 14902362 -8109182 + AT_rich Low_complexity Low_complexity 1 30 0 7 698 204 40 0 0 chr2L 14902769 14902794 -8108750 + (TTTCG)n Simple_repeat Simple_repeat 1 25 0 7 698 21 0 0 0 chr2L 14906156 14906177 -8105367 + GC_rich Low_complexity Low_complexity 1 21 0 7 698 224 211 0 0 chr2L 14908691 14908748 -8102796 + (TGG)n Simple_repeat Simple_repeat 3 59 0 7 698 23 0 0 0 chr2L 14910031 14910054 -8101490 + AT_rich Low_complexity Low_complexity 1 23 0 7 698 259 221 29 0 chr2L 14912320 14912388 -8099156 + (GATTG)n Simple_repeat Simple_repeat 5 74 0 7 698 42 36 0 0 chr2L 14912695 14912751 -8098793 + AT_rich Low_complexity Low_complexity 1 56 0 7 698 225 65 0 0 chr2L 14914575 14914606 -8096938 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 698 231 36 0 0 chr2L 14916346 14916374 -8095170 + (CAG)n Simple_repeat Simple_repeat 2 29 0 7 698 180 77 0 0 chr2L 14916424 14916450 -8095094 + (T)n Simple_repeat Simple_repeat 1 26 0 7 698 22 0 0 0 chr2L 14917230 14917252 -8094292 + AT_rich Low_complexity Low_complexity 1 22 0 7 698 198 103 0 0 chr2L 14917311 14917340 -8094204 + (TA)n Simple_repeat Simple_repeat 1 29 0 7 698 267 122 0 0 chr2L 14921172 14921221 -8090323 + (CAT)n Simple_repeat Simple_repeat 2 50 0 7 698 235 246 0 0 chr2L 14921569 14921626 -8089918 + A-rich Low_complexity Low_complexity 1 57 0 7 698 27 0 0 0 chr2L 14930656 14930683 -8080861 + AT_rich Low_complexity Low_complexity 1 27 0 7 698 22 0 0 0 chr2L 14932059 14932081 -8079463 + AT_rich Low_complexity Low_complexity 1 22 0 7 698 201 74 0 0 chr2L 14933940 14933967 -8077577 + (ACTCG)n Simple_repeat Simple_repeat 5 31 0 7 698 22 0 0 0 chr2L 14934219 14934241 -8077303 + AT_rich Low_complexity Low_complexity 1 22 0 7 698 200 35 35 0 chr2L 14936102 14936131 -8075413 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 7 698 263 171 13 0 chr2L 14936377 14936453 -8075091 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 698 183 42 0 0 chr2L 14938160 14938184 -8073360 + (TATG)n Simple_repeat Simple_repeat 2 25 0 7 698 21 0 0 0 chr2L 14939621 14939642 -8071902 + AT_rich Low_complexity Low_complexity 1 21 0 7 698 207 69 0 0 chr2L 14939927 14939956 -8071588 + (TC)n Simple_repeat Simple_repeat 2 30 0 7 698 204 204 18 18 chr2L 14941222 14941277 -8070267 + A-rich Low_complexity Low_complexity 2 56 0 7 698 223 246 0 0 chr2L 14941306 14941363 -8070181 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 699 23 0 0 0 chr2L 14942588 14942611 -8068933 + AT_rich Low_complexity Low_complexity 1 23 0 7 699 200 216 20 0 chr2L 14942894 14942945 -8068599 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 699 21 0 0 0 chr2L 14943356 14943377 -8068167 + AT_rich Low_complexity Low_complexity 1 21 0 7 699 25 21 0 59 chr2L 14944333 14944384 -8067160 + AT_rich Low_complexity Low_complexity 1 48 0 7 699 24 32 0 0 chr2L 14945006 14945037 -8066507 + AT_rich Low_complexity Low_complexity 1 31 0 7 699 28 0 0 0 chr2L 14945897 14945925 -8065619 + AT_rich Low_complexity Low_complexity 1 28 0 7 699 31 76 0 0 chr2L 14950041 14950107 -8061437 + AT_rich Low_complexity Low_complexity 1 66 0 7 699 243 88 0 0 chr2L 14950335 14950369 -8061175 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 699 22 0 0 0 chr2L 14952669 14952691 -8058853 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 180 77 0 0 chr2L 14952884 14952910 -8058634 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 699 21 0 0 0 chr2L 14953334 14953355 -8058189 + AT_rich Low_complexity Low_complexity 1 21 0 7 699 25 31 0 0 chr2L 14954067 14954099 -8057445 + AT_rich Low_complexity Low_complexity 1 32 0 7 699 207 205 0 0 chr2L 14955916 14955955 -8055589 + (ATG)n Simple_repeat Simple_repeat 3 41 0 7 699 22 0 0 0 chr2L 14958392 14958414 -8053130 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 23 0 0 0 chr2L 14962763 14962786 -8048758 + AT_rich Low_complexity Low_complexity 1 23 0 7 699 21 36 0 0 chr2L 14963126 14963154 -8048390 + AT_rich Low_complexity Low_complexity 1 28 0 7 699 258 32 0 0 chr2L 14963495 14963526 -8048018 + (TA)n Simple_repeat Simple_repeat 2 32 0 7 699 31 44 0 0 chr2L 14970510 14970555 -8040989 + AT_rich Low_complexity Low_complexity 1 45 0 7 699 22 35 0 0 chr2L 14970676 14970705 -8040839 + AT_rich Low_complexity Low_complexity 1 29 0 7 699 25 51 0 0 chr2L 14971182 14971221 -8040323 + AT_rich Low_complexity Low_complexity 1 39 0 7 699 242 233 0 43 chr2L 14971590 14971684 -8039860 - ROO_I LTR Pao -7525 731 642 7 699 22 0 0 0 chr2L 14972704 14972726 -8038818 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 234 0 0 0 chr2L 14973808 14973834 -8037710 + (CAGTT)n Simple_repeat Simple_repeat 4 29 0 7 699 22 0 0 0 chr2L 14976055 14976077 -8035467 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 325 227 0 0 chr2L 14976628 14976716 -8034828 + (CTG)n Simple_repeat Simple_repeat 3 90 0 7 699 21 0 0 0 chr2L 14978962 14978983 -8032561 + AT_rich Low_complexity Low_complexity 1 21 0 7 699 23 68 0 0 chr2L 14979175 14979219 -8032325 + AT_rich Low_complexity Low_complexity 1 44 0 7 699 34 55 0 0 chr2L 14982183 14982238 -8029306 + AT_rich Low_complexity Low_complexity 1 55 0 7 699 191 152 0 21 chr2L 14982858 14982905 -8028639 + (CATA)n Simple_repeat Simple_repeat 3 48 0 7 699 22 0 0 0 chr2L 14983275 14983297 -8028247 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 21 0 0 0 chr2L 14983646 14983667 -8027877 + AT_rich Low_complexity Low_complexity 1 21 0 7 699 339 105 0 0 chr2L 14983883 14983940 -8027604 + (GATTG)n Simple_repeat Simple_repeat 5 61 0 7 699 234 0 0 0 chr2L 14984426 14984452 -8027092 + (TA)n Simple_repeat Simple_repeat 1 26 0 7 699 4493 4 0 0 chr2L 14984452 14984970 -8026574 + NOMAD_LTR LTR Gypsy 1 518 0 7 699 49845 0 14 1 chr2L 14984970 14991457 -8020087 + NOMAD_I LTR Gypsy 1 6572 0 7 699 4493 4 0 0 chr2L 14991457 14991975 -8019569 + NOMAD_LTR LTR Gypsy 1 518 0 7 699 21 0 0 0 chr2L 14995417 14995438 -8016106 + AT_rich Low_complexity Low_complexity 1 21 0 7 699 198 0 0 0 chr2L 14995675 14995697 -8015847 + (TC)n Simple_repeat Simple_repeat 1 22 0 7 699 22 0 0 0 chr2L 14996092 14996114 -8015430 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 22 0 0 0 chr2L 14996843 14996865 -8014679 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 30 27 0 0 chr2L 14997713 14997750 -8013794 + AT_rich Low_complexity Low_complexity 1 37 0 7 699 22 0 0 0 chr2L 14999452 14999474 -8012070 + AT_rich Low_complexity Low_complexity 1 22 0 7 699 186 103 0 0 chr2L 15001588 15001617 -8009927 + (CATAT)n Simple_repeat Simple_repeat 2 30 0 7 699 302 85 213 0 chr2L 15004843 15004890 -8006654 + DNAREP1_DM LINE Penelope 1 57 -537 7 699 703 100 318 7 chr2L 15004899 15005050 -8006494 + DNAREP1_DM LINE Penelope 382 579 -15 7 699 27 29 0 0 chr2L 15007515 15007549 -8003995 + AT_rich Low_complexity Low_complexity 1 34 0 7 699 180 111 0 0 chr2L 15008436 15008463 -8003081 + (CGA)n Simple_repeat Simple_repeat 2 28 0 7 699 27 29 0 0 chr2L 15011632 15011666 -7999878 + AT_rich Low_complexity Low_complexity 1 34 0 7 699 26 0 0 0 chr2L 15013316 15013342 -7998202 + AT_rich Low_complexity Low_complexity 1 26 0 7 699 267 164 0 0 chr2L 15013662 15013723 -7997821 + CT-rich Low_complexity Low_complexity 2 62 0 7 699 260 227 15 0 chr2L 15013749 15013815 -7997729 + (TG)n Simple_repeat Simple_repeat 2 68 0 7 699 26 93 0 0 chr2L 15014501 15014576 -7996968 + AT_rich Low_complexity Low_complexity 1 75 0 7 699 243 173 0 0 chr2L 15017069 15017121 -7994423 + (CAA)n Simple_repeat Simple_repeat 3 54 0 7 699 24 32 0 0 chr2L 15020617 15020648 -7990896 + AT_rich Low_complexity Low_complexity 1 31 0 7 699 228 140 0 57 chr2L 15020801 15020854 -7990690 + (GTTTG)n Simple_repeat Simple_repeat 5 54 0 7 699 186 150 0 0 chr2L 15020935 15020975 -7990569 + (TTTTTA)n Simple_repeat Simple_repeat 5 44 0 7 699 204 40 0 0 chr2L 15021891 15021916 -7989628 + (CTGGGG)n Simple_repeat Simple_repeat 2 26 0 7 699 225 65 0 0 chr2L 15023258 15023289 -7988255 + (GTCTG)n Simple_repeat Simple_repeat 4 34 0 7 699 180 0 0 0 chr2L 15023290 15023310 -7988234 + (CAGTT)n Simple_repeat Simple_repeat 2 21 0 7 699 210 128 0 0 chr2L 15024553 15024592 -7986952 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 7 699 26 30 0 0 chr2L 15030392 15030425 -7981119 + AT_rich Low_complexity Low_complexity 1 33 0 7 699 28 48 0 0 chr2L 15035059 15035101 -7976443 + AT_rich Low_complexity Low_complexity 1 42 0 7 699 21 0 0 0 chr2L 15035118 15035139 -7976405 + AT_rich Low_complexity Low_complexity 1 21 0 7 699 204 171 0 24 chr2L 15039787 15039829 -7971715 + (CAA)n Simple_repeat Simple_repeat 2 42 0 7 699 347 182 0 0 chr2L 15040106 15040194 -7971350 + ROO_I LTR Pao 646 733 -7523 7 699 26 30 0 0 chr2L 15040666 15040699 -7970845 + AT_rich Low_complexity Low_complexity 1 33 0 7 699 217 346 0 37 chr2L 15042453 15042561 -7968983 + (CAG)n Simple_repeat Simple_repeat 2 105 0 7 699 21 57 0 0 chr2L 15044621 15044656 -7966888 + AT_rich Low_complexity Low_complexity 1 35 0 7 699 22 35 0 0 chr2L 15044960 15044989 -7966555 + AT_rich Low_complexity Low_complexity 1 29 0 7 699 26 0 0 0 chr2L 15045368 15045394 -7966150 + AT_rich Low_complexity Low_complexity 1 26 0 7 699 192 111 0 0 chr2L 15057451 15057487 -7954057 + (TTTTC)n Simple_repeat Simple_repeat 2 37 0 7 699 24 32 0 0 chr2L 15058699 15058730 -7952814 + AT_rich Low_complexity Low_complexity 1 31 0 7 699 23 33 0 0 chr2L 15061388 15061418 -7950126 + AT_rich Low_complexity Low_complexity 1 30 0 7 699 32 67 0 0 chr2L 15072056 15072116 -7939428 + AT_rich Low_complexity Low_complexity 1 60 0 7 699 22 0 0 0 chr2L 15072475 15072497 -7939047 + AT_rich Low_complexity Low_complexity 1 22 0 7 700 387 85 17 0 chr2L 15081482 15081541 -7930003 - HOBO DNA hAT -2953 63 4 7 700 205 202 22 22 chr2L 15095030 15095121 -7916423 + GA-rich Low_complexity Low_complexity 3 93 0 7 700 27 29 0 0 chr2L 15095211 15095245 -7916299 + AT_rich Low_complexity Low_complexity 1 34 0 7 700 21 57 0 0 chr2L 15097067 15097102 -7914442 + AT_rich Low_complexity Low_complexity 1 35 0 7 700 200 34 0 33 chr2L 15097550 15097580 -7913964 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 7 700 317 77 0 37 chr2L 15098563 15098617 -7912927 + (ATG)n Simple_repeat Simple_repeat 1 52 0 7 700 21 0 0 0 chr2L 15101141 15101162 -7910382 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 25 51 0 0 chr2L 15102798 15102837 -7908707 + AT_rich Low_complexity Low_complexity 1 39 0 7 700 25 0 0 0 chr2L 15103196 15103221 -7908323 + AT_rich Low_complexity Low_complexity 1 25 0 7 700 219 167 0 0 chr2L 15104987 15105029 -7906515 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 700 201 147 0 0 chr2L 15105499 15105533 -7906011 + (CAA)n Simple_repeat Simple_repeat 1 34 0 7 700 217 276 0 44 chr2L 15106337 15106428 -7905116 + (CATA)n Simple_repeat Simple_repeat 2 88 0 7 700 22 35 0 0 chr2L 15110531 15110560 -7900984 + AT_rich Low_complexity Low_complexity 1 29 0 7 700 24 53 0 0 chr2L 15111043 15111081 -7900463 + AT_rich Low_complexity Low_complexity 1 38 0 7 700 21 0 0 0 chr2L 15111986 15112007 -7899537 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 342 159 0 0 chr2L 15114689 15114758 -7896786 + (CAGAGA)n Simple_repeat Simple_repeat 5 73 0 7 700 25 31 0 0 chr2L 15118300 15118332 -7893212 + AT_rich Low_complexity Low_complexity 1 32 0 7 700 207 0 0 0 chr2L 15120308 15120331 -7891213 + (CGA)n Simple_repeat Simple_repeat 3 25 0 7 700 23 0 0 0 chr2L 15120846 15120869 -7890675 + AT_rich Low_complexity Low_complexity 1 23 0 7 700 200 94 0 30 chr2L 15121900 15121933 -7889611 + (CAAGC)n Simple_repeat Simple_repeat 2 33 0 7 700 189 0 0 0 chr2L 15122630 15122651 -7888893 + (TATATG)n Simple_repeat Simple_repeat 4 24 0 7 700 32 0 0 0 chr2L 15123712 15123744 -7887800 + AT_rich Low_complexity Low_complexity 1 32 0 7 700 24 91 0 0 chr2L 15124412 15124478 -7887066 + AT_rich Low_complexity Low_complexity 1 66 0 7 700 245 29 29 0 chr2L 15124952 15124986 -7886558 + (TTCTG)n Simple_repeat Simple_repeat 4 38 0 7 700 21 0 0 0 chr2L 15125052 15125073 -7886471 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 21 36 0 0 chr2L 15125487 15125515 -7886029 + AT_rich Low_complexity Low_complexity 1 28 0 7 700 206 278 0 0 chr2L 15126949 15127003 -7884541 + GA-rich Low_complexity Low_complexity 5 58 0 7 700 21 36 0 0 chr2L 15130673 15130701 -7880843 + AT_rich Low_complexity Low_complexity 1 28 0 7 700 486 160 78 29 chr2L 15131371 15131474 -7880070 - DNAREP1_DM LINE Penelope 0 594 487 7 700 273 222 0 0 chr2L 15131683 15131737 -7879807 - DNAREP1_DM LINE Penelope -539 55 2 7 700 28 29 0 0 chr2L 15132508 15132543 -7879001 + AT_rich Low_complexity Low_complexity 1 35 0 7 700 22 35 0 0 chr2L 15133279 15133308 -7878236 + AT_rich Low_complexity Low_complexity 1 29 0 7 700 26 50 0 0 chr2L 15134346 15134386 -7877158 + AT_rich Low_complexity Low_complexity 1 40 0 7 700 207 207 35 0 chr2L 15135415 15135473 -7876071 + (GCTG)n Simple_repeat Simple_repeat 2 61 0 7 700 210 136 0 43 chr2L 15137900 15137946 -7873598 + A-rich Low_complexity Low_complexity 2 45 0 7 700 21 36 0 0 chr2L 15144438 15144466 -7867078 + AT_rich Low_complexity Low_complexity 1 28 0 7 700 183 80 0 0 chr2L 15147476 15147501 -7864043 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 7 700 204 267 0 0 chr2L 15147784 15147829 -7863715 + A-rich Low_complexity Low_complexity 1 45 0 7 700 212 158 0 0 chr2L 15149011 15149049 -7862495 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 700 207 184 0 0 chr2L 15154323 15154361 -7857183 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 700 21 0 0 0 chr2L 15156354 15156375 -7855169 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 35 88 0 0 chr2L 15157588 15157679 -7853865 + AT_rich Low_complexity Low_complexity 1 91 0 7 700 218 125 21 0 chr2L 15158523 15158571 -7852973 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 700 231 103 0 0 chr2L 15158758 15158797 -7852747 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 700 22 56 0 0 chr2L 15159423 15159459 -7852085 + AT_rich Low_complexity Low_complexity 1 36 0 7 700 21 36 0 0 chr2L 15161180 15161208 -7850336 + AT_rich Low_complexity Low_complexity 1 28 0 7 700 192 135 0 0 chr2L 15161766 15161803 -7849741 + (A)n Simple_repeat Simple_repeat 1 37 0 7 700 215 260 0 50 chr2L 15161890 15161991 -7849553 + T-rich Low_complexity Low_complexity 2 97 0 7 700 21 0 0 0 chr2L 15163438 15163459 -7848085 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 27 29 0 0 chr2L 15163861 15163895 -7847649 + AT_rich Low_complexity Low_complexity 1 34 0 7 700 24 0 0 0 chr2L 15168251 15168275 -7843269 + AT_rich Low_complexity Low_complexity 1 24 0 7 700 28 48 0 0 chr2L 15171727 15171769 -7839775 + AT_rich Low_complexity Low_complexity 1 42 0 7 700 195 69 0 0 chr2L 15172314 15172343 -7839201 + (A)n Simple_repeat Simple_repeat 1 29 0 7 700 21 0 0 0 chr2L 15175307 15175328 -7836216 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 21 0 0 0 chr2L 15176511 15176532 -7835012 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 202 300 0 0 chr2L 15177596 15177656 -7833888 + A-rich Low_complexity Low_complexity 1 60 0 7 700 21 57 0 0 chr2L 15178589 15178624 -7832920 + AT_rich Low_complexity Low_complexity 1 35 0 7 700 21 0 0 0 chr2L 15179240 15179261 -7832283 + AT_rich Low_complexity Low_complexity 1 21 0 7 700 205 268 36 0 chr2L 15182683 15182739 -7828805 + (CAGC)n Simple_repeat Simple_repeat 2 59 0 7 700 186 143 0 0 chr2L 15186491 15186526 -7825018 + (TA)n Simple_repeat Simple_repeat 2 36 0 7 700 189 147 0 0 chr2L 15188019 15188053 -7823491 + (GA)n Simple_repeat Simple_repeat 2 35 0 7 700 210 132 0 50 chr2L 15190487 15190527 -7821017 + T-rich Low_complexity Low_complexity 3 40 0 7 700 215 239 0 0 chr2L 15190537 15190583 -7820961 + (TTG)n Simple_repeat Simple_repeat 2 47 0 7 700 243 133 0 0 chr2L 15191928 15191973 -7819571 + (CGAAT)n Simple_repeat Simple_repeat 1 45 0 7 700 180 0 0 0 chr2L 15195624 15195644 -7815900 + (TG)n Simple_repeat Simple_repeat 2 21 0 7 700 235 243 124 102 chr2L 15197194 15197419 -7814125 + DNAREP1_DM LINE Penelope 20 249 -345 7 700 226 156 0 43 chr2L 15197425 15197472 -7814072 + DNAREP1_DM LINE Penelope 20 64 -530 7 700 422 174 12 0 chr2L 15197533 15197619 -7813925 + DNAREP1_DM LINE Penelope 508 594 0 7 700 209 195 0 0 chr2L 15201379 15201420 -7810124 + (TTTCG)n Simple_repeat Simple_repeat 3 43 0 7 700 26 50 0 0 chr2L 15201644 15201684 -7809860 + AT_rich Low_complexity Low_complexity 1 40 0 7 700 25 31 0 0 chr2L 15202329 15202361 -7809183 + AT_rich Low_complexity Low_complexity 1 32 0 7 700 220 267 0 0 chr2L 15203030 15203105 -7808439 + T-rich Low_complexity Low_complexity 1 75 0 7 700 23 0 0 0 chr2L 15203697 15203720 -7807824 + AT_rich Low_complexity Low_complexity 1 23 0 7 700 509 75 49 19 chr2L 15204067 15204156 -7807388 - G5A_DM LINE Jockey 0 2841 2762 7 700 209 33 33 0 chr2L 15204190 15204220 -7807324 + (TTATA)n Simple_repeat Simple_repeat 5 35 0 7 701 441 81 0 0 chr2L 15208352 15208414 -7803130 + (CCAA)n Simple_repeat Simple_repeat 3 64 0 7 701 31 0 0 0 chr2L 15208768 15208799 -7802745 + AT_rich Low_complexity Low_complexity 1 31 0 7 701 23 0 0 0 chr2L 15209190 15209213 -7802331 + AT_rich Low_complexity Low_complexity 1 23 0 7 701 234 91 0 0 chr2L 15210310 15210343 -7801201 + (CATTC)n Simple_repeat Simple_repeat 5 37 0 7 701 24 32 0 0 chr2L 15210838 15210869 -7800675 + AT_rich Low_complexity Low_complexity 1 31 0 7 701 31 67 0 33 chr2L 15211739 15211831 -7799713 + AT_rich Low_complexity Low_complexity 1 89 0 7 701 22 0 0 0 chr2L 15213811 15213833 -7797711 + AT_rich Low_complexity Low_complexity 1 22 0 7 701 243 61 0 0 chr2L 15214276 15214309 -7797235 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 701 25 51 0 0 chr2L 15217398 15217437 -7794107 + AT_rich Low_complexity Low_complexity 1 39 0 7 701 21 0 0 0 chr2L 15218870 15218891 -7792653 + AT_rich Low_complexity Low_complexity 1 21 0 7 701 206 62 31 0 chr2L 15219886 15219918 -7791626 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 7 701 29 47 0 0 chr2L 15220236 15220279 -7791265 + AT_rich Low_complexity Low_complexity 1 43 0 7 701 198 0 0 0 chr2L 15221047 15221069 -7790475 + (TATG)n Simple_repeat Simple_repeat 3 24 0 7 701 297 75 0 0 chr2L 15222222 15222262 -7789282 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 701 22 0 0 0 chr2L 15222393 15222415 -7789129 + AT_rich Low_complexity Low_complexity 1 22 0 7 701 23 0 0 0 chr2L 15223555 15223578 -7787966 + AT_rich Low_complexity Low_complexity 1 23 0 7 701 27 0 0 0 chr2L 15226556 15226583 -7784961 + AT_rich Low_complexity Low_complexity 1 27 0 7 701 25 0 0 0 chr2L 15228747 15228772 -7782772 + AT_rich Low_complexity Low_complexity 1 25 0 7 701 306 148 0 0 chr2L 15229431 15229485 -7782059 + (GTCTG)n Simple_repeat Simple_repeat 1 54 0 7 701 231 36 0 0 chr2L 15231684 15231712 -7779832 + (ACCG)n Simple_repeat Simple_repeat 3 30 0 7 701 22 0 0 0 chr2L 15234311 15234333 -7777211 + AT_rich Low_complexity Low_complexity 1 22 0 7 701 228 143 0 0 chr2L 15234711 15234753 -7776791 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 701 21 0 0 0 chr2L 15235800 15235821 -7775723 + AT_rich Low_complexity Low_complexity 1 21 0 7 701 226 259 0 0 chr2L 15238020 15238074 -7773470 + (TA)n Simple_repeat Simple_repeat 1 54 0 7 701 23 0 0 0 chr2L 15238152 15238175 -7773369 + GC_rich Low_complexity Low_complexity 1 23 0 7 701 283 78 0 38 chr2L 15238981 15239034 -7772510 + (CAG)n Simple_repeat Simple_repeat 3 53 0 7 701 21 57 0 0 chr2L 15240116 15240151 -7771393 + AT_rich Low_complexity Low_complexity 1 35 0 7 701 234 194 0 0 chr2L 15242255 15242317 -7769227 + T-rich Low_complexity Low_complexity 1 62 0 7 701 218 128 43 0 chr2L 15242382 15242429 -7769115 + (TTGG)n Simple_repeat Simple_repeat 3 51 0 7 701 226 263 0 10 chr2L 15243089 15243185 -7768359 + CT-rich Low_complexity Low_complexity 1 95 0 7 701 22 0 0 0 chr2L 15243584 15243606 -7767938 + GC_rich Low_complexity Low_complexity 1 22 0 7 701 37 23 0 0 chr2L 15244089 15244133 -7767411 + AT_rich Low_complexity Low_complexity 1 44 0 7 701 232 266 10 21 chr2L 15247049 15247145 -7764399 + (TG)n Simple_repeat Simple_repeat 1 95 0 7 701 198 208 0 0 chr2L 15247230 15247283 -7764261 + A-rich Low_complexity Low_complexity 1 53 0 7 701 27 81 0 0 chr2L 15247942 15248004 -7763540 + AT_rich Low_complexity Low_complexity 1 62 0 7 701 22 35 0 0 chr2L 15248052 15248081 -7763463 + AT_rich Low_complexity Low_complexity 1 29 0 7 701 350 252 29 0 chr2L 15249761 15249864 -7761680 - DNAREP1_DM LINE Penelope 0 594 489 7 701 40 49 0 0 chr2L 15250324 15250385 -7761159 + AT_rich Low_complexity Low_complexity 1 61 0 7 701 22 35 0 0 chr2L 15253012 15253041 -7758503 + AT_rich Low_complexity Low_complexity 1 29 0 7 701 230 75 0 48 chr2L 15253607 15253649 -7757895 + (GAAAA)n Simple_repeat Simple_repeat 1 40 0 7 701 201 145 0 80 chr2L 15254379 15254454 -7757090 + A-rich Low_complexity Low_complexity 2 70 0 7 701 186 71 0 0 chr2L 15254597 15254625 -7756919 + (CAAAAA)n Simple_repeat Simple_repeat 5 32 0 7 701 225 65 0 0 chr2L 15254663 15254694 -7756850 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 701 33 43 0 0 chr2L 15254854 15254901 -7756643 + AT_rich Low_complexity Low_complexity 1 47 0 7 701 33 25 0 0 chr2L 15256420 15256460 -7755084 + AT_rich Low_complexity Low_complexity 1 40 0 7 701 213 39 0 0 chr2L 15258716 15258742 -7752802 + (TA)n Simple_repeat Simple_repeat 1 26 0 7 701 201 39 0 0 chr2L 15259102 15259128 -7752416 + (CTG)n Simple_repeat Simple_repeat 2 27 0 7 701 216 67 0 0 chr2L 15261002 15261032 -7750512 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 701 30 59 0 0 chr2L 15272185 15272236 -7739308 + AT_rich Low_complexity Low_complexity 1 51 0 7 701 31 112 0 0 chr2L 15272312 15272455 -7739089 + AT_rich Low_complexity Low_complexity 1 143 0 7 701 212 229 0 0 chr2L 15273886 15273934 -7737610 + (CTG)n Simple_repeat Simple_repeat 3 50 0 7 701 32 43 0 0 chr2L 15287545 15287591 -7723953 + AT_rich Low_complexity Low_complexity 1 46 0 7 701 232 222 0 0 chr2L 15293551 15293596 -7717948 + (CCCCAG)n Simple_repeat Simple_repeat 1 45 0 7 701 186 71 0 0 chr2L 15294694 15294722 -7716822 + (CATCC)n Simple_repeat Simple_repeat 2 29 0 7 701 25 31 0 0 chr2L 15295010 15295042 -7716502 + AT_rich Low_complexity Low_complexity 1 32 0 7 701 21 0 0 0 chr2L 15297388 15297409 -7714135 + AT_rich Low_complexity Low_complexity 1 21 0 7 701 30 27 0 0 chr2L 15299333 15299370 -7712174 + AT_rich Low_complexity Low_complexity 1 37 0 7 701 183 42 0 0 chr2L 15300090 15300114 -7711430 + (TA)n Simple_repeat Simple_repeat 1 24 0 7 701 22 0 0 0 chr2L 15300402 15300424 -7711120 + AT_rich Low_complexity Low_complexity 1 22 0 7 701 183 80 0 0 chr2L 15302633 15302658 -7708886 + (GATTG)n Simple_repeat Simple_repeat 1 25 0 7 701 21 36 0 0 chr2L 15305839 15305867 -7705677 + AT_rich Low_complexity Low_complexity 1 28 0 7 701 186 43 0 0 chr2L 15306294 15306317 -7705227 + (TA)n Simple_repeat Simple_repeat 2 24 0 7 701 22 0 0 0 chr2L 15306915 15306937 -7704607 + AT_rich Low_complexity Low_complexity 1 22 0 7 701 36 40 0 0 chr2L 15307422 15307472 -7704072 + AT_rich Low_complexity Low_complexity 1 50 0 7 701 23 0 0 0 chr2L 15307557 15307580 -7703964 + AT_rich Low_complexity Low_complexity 1 23 0 7 701 27 0 0 0 chr2L 15308582 15308609 -7702935 + AT_rich Low_complexity Low_complexity 1 27 0 7 701 26 0 0 0 chr2L 15309496 15309522 -7702022 + AT_rich Low_complexity Low_complexity 1 26 0 7 701 192 125 0 0 chr2L 15310059 15310091 -7701453 + (TA)n Simple_repeat Simple_repeat 1 32 0 7 701 219 190 0 0 chr2L 15314827 15314885 -7696659 + (CAG)n Simple_repeat Simple_repeat 3 60 0 7 701 21 0 0 0 chr2L 15319039 15319060 -7692484 + AT_rich Low_complexity Low_complexity 1 21 0 7 701 231 36 0 0 chr2L 15319912 15319940 -7691604 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 701 21 0 0 0 chr2L 15320877 15320898 -7690646 + AT_rich Low_complexity Low_complexity 1 21 0 7 701 22 0 0 0 chr2L 15321618 15321640 -7689904 + AT_rich Low_complexity Low_complexity 1 22 0 7 701 30 0 0 0 chr2L 15322100 15322130 -7689414 + AT_rich Low_complexity Low_complexity 1 30 0 7 701 27 0 0 0 chr2L 15326873 15326900 -7684644 + AT_rich Low_complexity Low_complexity 1 27 0 7 701 33 73 0 0 chr2L 15327735 15327803 -7683741 + AT_rich Low_complexity Low_complexity 1 68 0 7 701 44 20 0 0 chr2L 15330498 15330549 -7680995 + AT_rich Low_complexity Low_complexity 1 51 0 7 701 48 93 0 0 chr2L 15331071 15331210 -7680334 + AT_rich Low_complexity Low_complexity 1 139 0 7 701 21 0 0 0 chr2L 15332129 15332150 -7679394 + AT_rich Low_complexity Low_complexity 1 21 0 7 701 21 0 0 0 chr2L 15333058 15333079 -7678465 + AT_rich Low_complexity Low_complexity 1 21 0 7 702 240 35 0 0 chr2L 15337060 15337089 -7674455 + (CGAAA)n Simple_repeat Simple_repeat 3 31 0 7 702 192 97 0 0 chr2L 15345196 15345227 -7666317 + (ACTG)n Simple_repeat Simple_repeat 4 34 0 7 702 183 188 0 0 chr2L 15347303 15347351 -7664193 + (CACTC)n Simple_repeat Simple_repeat 2 49 0 7 702 25 75 0 0 chr2L 15348525 15348578 -7662966 + AT_rich Low_complexity Low_complexity 1 53 0 7 702 228 35 0 0 chr2L 15351283 15351312 -7660232 + (TAG)n Simple_repeat Simple_repeat 3 31 0 7 702 33 25 0 0 chr2L 15354051 15354091 -7657453 + AT_rich Low_complexity Low_complexity 1 40 0 7 702 189 245 0 0 chr2L 15358382 15358431 -7653113 + (CAA)n Simple_repeat Simple_repeat 2 50 0 7 702 23 54 0 0 chr2L 15358781 15358818 -7652726 + AT_rich Low_complexity Low_complexity 1 37 0 7 702 237 108 0 0 chr2L 15359944 15359981 -7651563 + (CAGT)n Simple_repeat Simple_repeat 1 37 0 7 702 21 0 0 0 chr2L 15360193 15360214 -7651330 + AT_rich Low_complexity Low_complexity 1 21 0 7 702 23 0 0 0 chr2L 15360245 15360268 -7651276 + AT_rich Low_complexity Low_complexity 1 23 0 7 702 35 24 0 0 chr2L 15363027 15363069 -7648475 + AT_rich Low_complexity Low_complexity 1 42 0 7 702 22 0 0 0 chr2L 15363119 15363141 -7648403 + AT_rich Low_complexity Low_complexity 1 22 0 7 702 22 80 0 0 chr2L 15363185 15363235 -7648309 + AT_rich Low_complexity Low_complexity 1 50 0 7 702 50 31 0 0 chr2L 15364287 15364351 -7647193 + AT_rich Low_complexity Low_complexity 1 64 0 7 702 22 0 0 0 chr2L 15365972 15365994 -7645550 + AT_rich Low_complexity Low_complexity 1 22 0 7 702 33 66 0 0 chr2L 15368618 15368679 -7642865 + AT_rich Low_complexity Low_complexity 1 61 0 7 702 214 147 0 0 chr2L 15369013 15369047 -7642497 + (GGATG)n Simple_repeat Simple_repeat 4 37 0 7 702 22 35 0 0 chr2L 15370099 15370128 -7641416 + AT_rich Low_complexity Low_complexity 1 29 0 7 702 40 59 0 0 chr2L 15371110 15371178 -7640366 + AT_rich Low_complexity Low_complexity 1 68 0 7 702 23 0 0 0 chr2L 15371481 15371504 -7640040 + AT_rich Low_complexity Low_complexity 1 23 0 7 702 27 0 0 0 chr2L 15372538 15372565 -7638979 + AT_rich Low_complexity Low_complexity 1 27 0 7 702 26 0 0 0 chr2L 15374043 15374069 -7637475 + AT_rich Low_complexity Low_complexity 1 26 0 7 702 23 33 0 0 chr2L 15374926 15374956 -7636588 + AT_rich Low_complexity Low_complexity 1 30 0 7 702 25 0 0 0 chr2L 15375697 15375722 -7635822 + AT_rich Low_complexity Low_complexity 1 25 0 7 702 26 64 0 0 chr2L 15375898 15375945 -7635599 + AT_rich Low_complexity Low_complexity 1 47 0 7 702 24 32 0 0 chr2L 15378808 15378839 -7632705 + AT_rich Low_complexity Low_complexity 1 31 0 7 702 31 26 0 0 chr2L 15379385 15379423 -7632121 + AT_rich Low_complexity Low_complexity 1 38 0 7 702 195 129 0 0 chr2L 15380024 15380055 -7631489 + (CAT)n Simple_repeat Simple_repeat 1 31 0 7 702 27 62 0 0 chr2L 15380988 15381036 -7630508 + AT_rich Low_complexity Low_complexity 1 48 0 7 702 37 52 0 0 chr2L 15382274 15382332 -7629212 + AT_rich Low_complexity Low_complexity 1 58 0 7 702 243 88 0 0 chr2L 15382741 15382775 -7628769 + (CAT)n Simple_repeat Simple_repeat 1 34 0 7 702 307 286 11 11 chr2L 15391995 15392087 -7619457 + (CAG)n Simple_repeat Simple_repeat 2 93 0 7 702 200 50 150 0 chr2L 15393787 15393827 -7617717 + (TTTAA)n Simple_repeat Simple_repeat 2 47 0 7 702 231 125 0 0 chr2L 15395447 15395487 -7616057 + (TCG)n Simple_repeat Simple_repeat 2 41 0 7 702 23 0 0 0 chr2L 15396118 15396141 -7615403 + AT_rich Low_complexity Low_complexity 1 23 0 7 702 36 62 0 0 chr2L 15397043 15397107 -7614437 + AT_rich Low_complexity Low_complexity 1 64 0 7 702 23 0 0 0 chr2L 15404209 15404232 -7607312 + AT_rich Low_complexity Low_complexity 1 23 0 7 702 264 206 14 29 chr2L 15407891 15407961 -7603583 + T-rich Low_complexity Low_complexity 4 72 0 7 702 25 31 0 0 chr2L 15409029 15409061 -7602483 + AT_rich Low_complexity Low_complexity 1 32 0 7 702 38 0 0 0 chr2L 15411473 15411511 -7600033 + AT_rich Low_complexity Low_complexity 1 38 0 7 702 26 64 0 0 chr2L 15412095 15412142 -7599402 + AT_rich Low_complexity Low_complexity 1 47 0 7 702 30 27 0 0 chr2L 15414856 15414893 -7596651 + AT_rich Low_complexity Low_complexity 1 37 0 7 702 23 54 0 0 chr2L 15418531 15418568 -7592976 + AT_rich Low_complexity Low_complexity 1 37 0 7 702 24 0 0 0 chr2L 15421584 15421608 -7589936 + AT_rich Low_complexity Low_complexity 1 24 0 7 702 32 0 0 0 chr2L 15423317 15423349 -7588195 + AT_rich Low_complexity Low_complexity 1 32 0 7 702 21 36 0 0 chr2L 15423408 15423436 -7588108 + AT_rich Low_complexity Low_complexity 1 28 0 7 702 216 0 0 0 chr2L 15429619 15429643 -7581901 + (GGA)n Simple_repeat Simple_repeat 2 25 0 7 702 200 189 0 36 chr2L 15433397 15433452 -7578092 + A-rich Low_complexity Low_complexity 2 54 0 7 702 22 0 0 0 chr2L 15436432 15436454 -7575090 + AT_rich Low_complexity Low_complexity 1 22 0 7 702 22 0 0 0 chr2L 15437657 15437679 -7573865 + AT_rich Low_complexity Low_complexity 1 22 0 7 702 30 45 0 0 chr2L 15439257 15439301 -7572243 + AT_rich Low_complexity Low_complexity 1 44 0 7 702 25 0 0 0 chr2L 15439325 15439350 -7572194 + AT_rich Low_complexity Low_complexity 1 25 0 7 702 27 62 0 0 chr2L 15440378 15440426 -7571118 + AT_rich Low_complexity Low_complexity 1 48 0 7 702 28 91 0 0 chr2L 15442415 15442492 -7569052 + AT_rich Low_complexity Low_complexity 1 77 0 7 702 21 0 0 0 chr2L 15443963 15443984 -7567560 + AT_rich Low_complexity Low_complexity 1 21 0 7 702 3766 0 0 0 chr2L 15446105 15446504 -7565040 + BLOOD_LTR LTR Gypsy 1 399 0 7 702 60184 1 0 0 chr2L 15446504 15453118 -7558426 + BLOOD_I LTR Gypsy 1 6613 0 7 702 3766 0 0 0 chr2L 15453118 15453517 -7558027 + BLOOD_LTR LTR Gypsy 1 399 0 7 702 197 119 24 0 chr2L 15455048 15455090 -7556454 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 702 24 0 0 0 chr2L 15455585 15455609 -7555935 + AT_rich Low_complexity Low_complexity 1 24 0 7 702 28 29 0 0 chr2L 15456335 15456370 -7555174 + AT_rich Low_complexity Low_complexity 1 35 0 7 702 189 121 0 0 chr2L 15456524 15456557 -7554987 + (TTA)n Simple_repeat Simple_repeat 2 34 0 7 702 39 60 0 0 chr2L 15458119 15458186 -7553358 + AT_rich Low_complexity Low_complexity 1 67 0 7 702 192 111 56 0 chr2L 15458309 15458363 -7553181 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 702 217 209 0 0 chr2L 15459406 15459449 -7552095 + (CCCCAG)n Simple_repeat Simple_repeat 5 47 0 7 702 22 0 0 0 chr2L 15462156 15462178 -7549366 + AT_rich Low_complexity Low_complexity 1 22 0 7 702 23 86 0 0 chr2L 15463695 15463753 -7547791 + AT_rich Low_complexity Low_complexity 1 58 0 7 703 48 96 0 0 chr2L 15467475 15467621 -7543923 + AT_rich Low_complexity Low_complexity 1 146 0 7 703 234 146 18 18 chr2L 15467874 15467930 -7543614 + (GCCTAA)n Simple_repeat Simple_repeat 4 59 0 7 703 21 0 0 0 chr2L 15468471 15468492 -7543052 + AT_rich Low_complexity Low_complexity 1 21 0 7 703 203 292 0 0 chr2L 15468552 15468617 -7542927 + (TCCGG)n Simple_repeat Simple_repeat 4 68 0 7 703 222 191 0 0 chr2L 15468573 15468615 -7542929 + (CGGTG)n Simple_repeat Simple_repeat 3 44 0 7 703 30 27 0 0 chr2L 15471449 15471486 -7540058 + AT_rich Low_complexity Low_complexity 1 37 0 7 703 23 54 0 0 chr2L 15472063 15472100 -7539444 + AT_rich Low_complexity Low_complexity 1 37 0 7 703 26 50 0 0 chr2L 15473451 15473491 -7538053 + AT_rich Low_complexity Low_complexity 1 40 0 7 703 216 0 0 0 chr2L 15474276 15474300 -7537244 + (TCC)n Simple_repeat Simple_repeat 1 24 0 7 703 21 0 0 0 chr2L 15476448 15476469 -7535075 + AT_rich Low_complexity Low_complexity 1 21 0 7 703 25 0 0 0 chr2L 15476603 15476628 -7534916 + AT_rich Low_complexity Low_complexity 1 25 0 7 703 209 163 0 20 chr2L 15478443 15478493 -7533051 + CT-rich Low_complexity Low_complexity 1 49 0 7 703 21 0 0 0 chr2L 15481768 15481789 -7529755 + AT_rich Low_complexity Low_complexity 1 21 0 7 703 21 36 0 0 chr2L 15487585 15487613 -7523931 + AT_rich Low_complexity Low_complexity 1 28 0 7 703 41 58 0 0 chr2L 15490076 15490145 -7521399 + AT_rich Low_complexity Low_complexity 1 69 0 7 703 24 0 0 0 chr2L 15491762 15491786 -7519758 + AT_rich Low_complexity Low_complexity 1 24 0 7 703 228 220 0 0 chr2L 15492161 15492211 -7519333 + CT-rich Low_complexity Low_complexity 2 51 0 7 703 213 250 0 0 chr2L 15493522 15493570 -7517974 + (CAA)n Simple_repeat Simple_repeat 3 50 0 7 703 23 33 0 0 chr2L 15498761 15498791 -7512753 + AT_rich Low_complexity Low_complexity 1 30 0 7 703 22 0 0 0 chr2L 15504150 15504172 -7507372 + AT_rich Low_complexity Low_complexity 1 22 0 7 703 26 0 0 0 chr2L 15504635 15504661 -7506883 + AT_rich Low_complexity Low_complexity 1 26 0 7 703 22 0 0 0 chr2L 15508334 15508356 -7503188 + AT_rich Low_complexity Low_complexity 1 22 0 7 703 327 136 0 0 chr2L 15516706 15516765 -7494779 + (CA)n Simple_repeat Simple_repeat 1 59 0 7 703 24 0 0 0 chr2L 15522697 15522721 -7488823 + AT_rich Low_complexity Low_complexity 1 24 0 7 703 183 42 0 0 chr2L 15526877 15526901 -7484643 + (A)n Simple_repeat Simple_repeat 1 24 0 7 703 225 94 0 0 chr2L 15528260 15528292 -7483252 + DNAREP1_DM LINE Penelope 563 594 0 7 703 180 0 0 0 chr2L 15530713 15530733 -7480811 + (T)n Simple_repeat Simple_repeat 1 20 0 7 703 24 32 0 0 chr2L 15530977 15531008 -7480536 + AT_rich Low_complexity Low_complexity 1 31 0 7 703 544 131 126 36 chr2L 15534283 15534394 -7477150 - DNAREP1_DM LINE Penelope -71 523 403 7 703 497 218 63 24 chr2L 15534441 15534568 -7476976 - DNAREP1_DM LINE Penelope -462 132 1 7 703 29 47 0 0 chr2L 15535010 15535053 -7476491 + AT_rich Low_complexity Low_complexity 1 43 0 7 703 24 0 0 0 chr2L 15535182 15535206 -7476338 + AT_rich Low_complexity Low_complexity 1 24 0 7 703 204 214 0 0 chr2L 15536176 15536218 -7475326 + (TGGG)n Simple_repeat Simple_repeat 2 43 0 7 703 22 70 0 0 chr2L 15538745 15538788 -7472756 + AT_rich Low_complexity Low_complexity 1 43 0 7 703 225 94 0 0 chr2L 15539268 15539300 -7472244 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 703 26 30 0 0 chr2L 15540137 15540170 -7471374 + AT_rich Low_complexity Low_complexity 1 33 0 7 703 34 42 0 0 chr2L 15543158 15543206 -7468338 + AT_rich Low_complexity Low_complexity 1 48 0 7 703 22 35 0 0 chr2L 15549808 15549837 -7461707 + AT_rich Low_complexity Low_complexity 1 29 0 7 703 32 26 0 0 chr2L 15551043 15551082 -7460462 + AT_rich Low_complexity Low_complexity 1 39 0 7 703 197 33 33 0 chr2L 15552946 15552976 -7458568 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 7 703 28 0 0 0 chr2L 15554463 15554491 -7457053 + AT_rich Low_complexity Low_complexity 1 28 0 7 703 200 185 19 0 chr2L 15554732 15554786 -7456758 + (CAG)n Simple_repeat Simple_repeat 3 57 0 7 703 25 0 0 0 chr2L 15565507 15565532 -7446012 + AT_rich Low_complexity Low_complexity 1 25 0 7 703 28 0 0 0 chr2L 15567195 15567223 -7444321 + AT_rich Low_complexity Low_complexity 1 28 0 7 703 260 200 12 0 chr2L 15567895 15567975 -7443569 + (TG)n Simple_repeat Simple_repeat 2 82 0 7 703 25 0 0 0 chr2L 15568271 15568296 -7443248 + AT_rich Low_complexity Low_complexity 1 25 0 7 703 23 0 0 0 chr2L 15569388 15569411 -7442133 + AT_rich Low_complexity Low_complexity 1 23 0 7 703 180 125 0 0 chr2L 15574715 15574747 -7436797 + (TTATA)n Simple_repeat Simple_repeat 4 35 0 7 703 21 0 0 0 chr2L 15575650 15575671 -7435873 + AT_rich Low_complexity Low_complexity 1 21 0 7 703 26 50 0 0 chr2L 15575684 15575724 -7435820 + AT_rich Low_complexity Low_complexity 1 40 0 7 703 24 67 0 0 chr2L 15578065 15578110 -7433434 + AT_rich Low_complexity Low_complexity 1 45 0 7 703 22 70 0 0 chr2L 15578659 15578702 -7432842 + AT_rich Low_complexity Low_complexity 1 43 0 7 703 21 57 0 0 chr2L 15581651 15581686 -7429858 + AT_rich Low_complexity Low_complexity 1 35 0 7 703 25 31 0 0 chr2L 15581766 15581798 -7429746 + AT_rich Low_complexity Low_complexity 1 32 0 7 703 24 67 0 0 chr2L 15584692 15584737 -7426807 + AT_rich Low_complexity Low_complexity 1 45 0 7 703 3368 5 7 7 chr2L 15586464 15586878 -7424666 + DM297_LTR LTR Gypsy 1 414 0 7 703 51063 7 0 0 chr2L 15586878 15593045 -7418499 + DM297_I LTR Gypsy 1 6167 0 7 703 3368 5 7 7 chr2L 15593045 15593459 -7418085 + DM297_LTR LTR Gypsy 1 414 0 7 703 21 0 0 0 chr2L 15595438 15595459 -7416085 + AT_rich Low_complexity Low_complexity 1 21 0 7 704 180 77 0 0 chr2L 15599509 15599535 -7412009 + (CATTT)n Simple_repeat Simple_repeat 1 26 0 7 704 24 0 0 0 chr2L 15606092 15606116 -7405428 + AT_rich Low_complexity Low_complexity 1 24 0 7 704 198 0 0 0 chr2L 15608338 15608360 -7403184 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 704 22 35 0 0 chr2L 15616077 15616106 -7395438 + AT_rich Low_complexity Low_complexity 1 29 0 7 704 27 0 0 0 chr2L 15619487 15619514 -7392030 + AT_rich Low_complexity Low_complexity 1 27 0 7 704 22 35 0 0 chr2L 15621059 15621088 -7390456 + AT_rich Low_complexity Low_complexity 1 29 0 7 704 180 214 0 0 chr2L 15621895 15621951 -7389593 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 704 24 0 0 0 chr2L 15622010 15622034 -7389510 + AT_rich Low_complexity Low_complexity 1 24 0 7 704 22 0 0 0 chr2L 15622435 15622457 -7389087 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 35 24 0 0 chr2L 15627165 15627207 -7384337 + AT_rich Low_complexity Low_complexity 1 42 0 7 704 28 48 0 0 chr2L 15627277 15627319 -7384225 + AT_rich Low_complexity Low_complexity 1 42 0 7 704 23 0 0 0 chr2L 15633069 15633092 -7378452 + AT_rich Low_complexity Low_complexity 1 23 0 7 704 22 0 0 0 chr2L 15635038 15635060 -7376484 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 36 62 0 0 chr2L 15635882 15635946 -7375598 + AT_rich Low_complexity Low_complexity 1 64 0 7 704 21 36 0 0 chr2L 15637260 15637288 -7374256 + AT_rich Low_complexity Low_complexity 1 28 0 7 704 180 0 0 0 chr2L 15638583 15638603 -7372941 + (CAG)n Simple_repeat Simple_repeat 1 20 0 7 704 21 0 0 0 chr2L 15638791 15638812 -7372732 + AT_rich Low_complexity Low_complexity 1 21 0 7 704 24 32 0 0 chr2L 15639371 15639402 -7372142 + AT_rich Low_complexity Low_complexity 1 31 0 7 704 26 0 0 0 chr2L 15644399 15644425 -7367119 + AT_rich Low_complexity Low_complexity 1 26 0 7 704 25 0 0 0 chr2L 15644626 15644651 -7366893 + AT_rich Low_complexity Low_complexity 1 25 0 7 704 26 0 0 0 chr2L 15645612 15645638 -7365906 + AT_rich Low_complexity Low_complexity 1 26 0 7 704 23 33 0 0 chr2L 15646305 15646335 -7365209 + AT_rich Low_complexity Low_complexity 1 30 0 7 704 24 32 0 0 chr2L 15646892 15646923 -7364621 + AT_rich Low_complexity Low_complexity 1 31 0 7 704 22 0 0 0 chr2L 15652156 15652178 -7359366 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 39 60 0 0 chr2L 15652232 15652299 -7359245 + AT_rich Low_complexity Low_complexity 1 67 0 7 704 4353 0 0 10 chr2L 15653161 15653665 -7357879 - HOBO DNA hAT 0 3016 2518 7 704 7959 1 0 0 chr2L 15653663 15654567 -7356977 - HOBO DNA hAT -2112 904 1 7 704 378 137 68 0 chr2L 15657123 15657196 -7354348 + DNAREP1_DM LINE Penelope 434 511 -83 7 704 35 88 0 0 chr2L 15657811 15657902 -7353642 + AT_rich Low_complexity Low_complexity 1 91 0 7 704 231 114 0 0 chr2L 15658428 15658463 -7353081 + (CGATG)n Simple_repeat Simple_repeat 5 39 0 7 704 22 0 0 0 chr2L 15660485 15660507 -7351037 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 21 0 0 0 chr2L 15660811 15660832 -7350712 + AT_rich Low_complexity Low_complexity 1 21 0 7 704 22 0 0 0 chr2L 15660926 15660948 -7350596 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 388 185 25 0 chr2L 15661345 15661426 -7350118 - DNAREP1_DM LINE Penelope 0 594 512 7 704 198 0 0 0 chr2L 15666003 15666025 -7345519 + (CAG)n Simple_repeat Simple_repeat 1 22 0 7 704 22 0 0 0 chr2L 15666687 15666709 -7344835 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 227 79 0 26 chr2L 15667731 15667770 -7343774 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 704 26 0 0 0 chr2L 15668318 15668344 -7343200 + AT_rich Low_complexity Low_complexity 1 26 0 7 704 25 51 0 0 chr2L 15669122 15669161 -7342383 + AT_rich Low_complexity Low_complexity 1 39 0 7 704 186 103 0 0 chr2L 15669584 15669613 -7341931 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 704 23 0 0 0 chr2L 15670021 15670044 -7341500 + AT_rich Low_complexity Low_complexity 1 23 0 7 704 246 62 0 0 chr2L 15671699 15671731 -7339813 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 704 22 0 0 0 chr2L 15673779 15673801 -7337743 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 183 146 0 0 chr2L 15674026 15674067 -7337477 + (TC)n Simple_repeat Simple_repeat 1 41 0 7 704 213 65 0 0 chr2L 15679932 15679963 -7331581 + (TA)n Simple_repeat Simple_repeat 2 32 0 7 704 195 42 0 0 chr2L 15680547 15680571 -7330973 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 7 704 189 0 0 0 chr2L 15680622 15680643 -7330901 + (CCCCCT)n Simple_repeat Simple_repeat 4 24 0 7 704 201 138 0 0 chr2L 15682452 15682481 -7329063 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 704 212 146 0 111 chr2L 15682626 15682680 -7328864 + polypyrimidine Low_complexity Low_complexity 2 49 0 7 704 5661 3 0 0 chr2L 15683782 15684440 -7327104 + QUASIMODO_LTR LTR Gypsy 1 658 0 7 704 19652 4 0 0 chr2L 15684440 15686758 -7324786 + QUASIMODO_I LTR Gypsy 1 2318 -3742 7 704 4353 0 0 10 chr2L 15686758 15687262 -7324282 - HOBO DNA hAT 0 3016 2518 7 704 7959 1 0 0 chr2L 15687260 15688164 -7323380 - HOBO DNA hAT -2112 904 1 7 704 378 137 68 0 chr2L 15690720 15690793 -7320751 + DNAREP1_DM LINE Penelope 434 511 -83 7 704 35 88 0 0 chr2L 15691408 15691499 -7320045 + AT_rich Low_complexity Low_complexity 1 91 0 7 704 231 114 0 0 chr2L 15692025 15692060 -7319484 + (CGATG)n Simple_repeat Simple_repeat 5 39 0 7 704 35 88 0 0 chr2L 15692808 15692899 -7318645 + AT_rich Low_complexity Low_complexity 1 91 0 7 704 231 114 0 0 chr2L 15693425 15693460 -7318084 + (CGATG)n Simple_repeat Simple_repeat 5 39 0 7 704 22 0 0 0 chr2L 15695482 15695504 -7316040 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 21 0 0 0 chr2L 15695808 15695829 -7315715 + AT_rich Low_complexity Low_complexity 1 21 0 7 704 22 0 0 0 chr2L 15695923 15695945 -7315599 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 388 185 25 0 chr2L 15696342 15696423 -7315121 - DNAREP1_DM LINE Penelope 0 594 512 7 704 198 0 0 0 chr2L 15701000 15701022 -7310522 + (CAG)n Simple_repeat Simple_repeat 1 22 0 7 704 22 0 0 0 chr2L 15701684 15701706 -7309838 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 227 79 0 26 chr2L 15702728 15702767 -7308777 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 704 26 0 0 0 chr2L 15703315 15703341 -7308203 + AT_rich Low_complexity Low_complexity 1 26 0 7 704 25 51 0 0 chr2L 15704119 15704158 -7307386 + AT_rich Low_complexity Low_complexity 1 39 0 7 704 186 103 0 0 chr2L 15704581 15704610 -7306934 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 704 23 0 0 0 chr2L 15705018 15705041 -7306503 + AT_rich Low_complexity Low_complexity 1 23 0 7 704 246 62 0 0 chr2L 15706696 15706728 -7304816 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 704 22 0 0 0 chr2L 15708776 15708798 -7302746 + AT_rich Low_complexity Low_complexity 1 22 0 7 704 183 146 0 0 chr2L 15709023 15709064 -7302480 + (TC)n Simple_repeat Simple_repeat 1 41 0 7 704 213 65 0 0 chr2L 15714929 15714960 -7296584 + (TA)n Simple_repeat Simple_repeat 2 32 0 7 704 195 42 0 0 chr2L 15715544 15715568 -7295976 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 7 704 189 0 0 0 chr2L 15715619 15715640 -7295904 + (CCCCCT)n Simple_repeat Simple_repeat 4 24 0 7 704 201 138 0 0 chr2L 15717449 15717478 -7294066 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 704 212 146 0 111 chr2L 15717623 15717677 -7293867 + polypyrimidine Low_complexity Low_complexity 2 49 0 7 704 5661 3 0 0 chr2L 15718779 15719437 -7292107 + QUASIMODO_LTR LTR Gypsy 1 658 0 7 704 19652 4 0 0 chr2L 15719437 15721755 -7289789 + QUASIMODO_I LTR Gypsy 1 2318 -3742 7 704 4353 0 0 10 chr2L 15721755 15722259 -7289285 - HOBO DNA hAT 0 3016 2518 7 704 8492 1 0 0 chr2L 15722257 15723161 -7288383 - HOBO DNA hAT -2112 904 1 7 704 33227 3 0 0 chr2L 15723161 15726911 -7284633 + QUASIMODO_I LTR Gypsy 2311 6060 0 7 704 6047 3 0 0 chr2L 15726911 15727569 -7283975 + QUASIMODO_LTR LTR Gypsy 1 658 0 7 704 27 29 0 0 chr2L 15727669 15727703 -7283841 + AT_rich Low_complexity Low_complexity 1 34 0 7 704 236 192 0 0 chr2L 15727746 15727798 -7283746 + T-rich Low_complexity Low_complexity 1 52 0 7 704 21 0 0 0 chr2L 15727932 15727953 -7283591 + AT_rich Low_complexity Low_complexity 1 21 0 7 705 203 286 0 0 chr2L 15730424 15730494 -7281050 + (TCG)n Simple_repeat Simple_repeat 2 71 0 7 705 26 30 0 0 chr2L 15738001 15738034 -7273510 + AT_rich Low_complexity Low_complexity 1 33 0 7 705 237 33 0 0 chr2L 15739705 15739735 -7271809 + (ATG)n Simple_repeat Simple_repeat 3 32 0 7 705 24 0 0 0 chr2L 15740702 15740726 -7270818 + AT_rich Low_complexity Low_complexity 1 24 0 7 705 29 70 0 0 chr2L 15740906 15740963 -7270581 + AT_rich Low_complexity Low_complexity 1 57 0 7 705 203 235 39 0 chr2L 15741991 15742042 -7269502 + CT-rich Low_complexity Low_complexity 2 54 0 7 705 186 133 0 0 chr2L 15744055 15744085 -7267459 + (CGG)n Simple_repeat Simple_repeat 3 32 0 7 705 40 37 0 0 chr2L 15747074 15747128 -7264416 + AT_rich Low_complexity Low_complexity 1 54 0 7 705 26 0 0 0 chr2L 15747186 15747212 -7264332 + AT_rich Low_complexity Low_complexity 1 26 0 7 705 33 66 0 0 chr2L 15748997 15749058 -7262486 + AT_rich Low_complexity Low_complexity 1 61 0 7 705 28 48 0 0 chr2L 15749160 15749202 -7262342 + AT_rich Low_complexity Low_complexity 1 42 0 7 705 21 0 0 0 chr2L 15749883 15749904 -7261640 + AT_rich Low_complexity Low_complexity 1 21 0 7 705 412 167 14 0 chr2L 15751132 15751204 -7260340 - DNAREP1_DM LINE Penelope -2 592 520 7 705 26 64 0 0 chr2L 15751917 15751964 -7259580 + AT_rich Low_complexity Low_complexity 1 47 0 7 705 24 77 0 0 chr2L 15756472 15756524 -7255020 + AT_rich Low_complexity Low_complexity 1 52 0 7 705 210 118 0 0 chr2L 15761677 15761711 -7249833 + (CATA)n Simple_repeat Simple_repeat 3 36 0 7 705 200 229 0 20 chr2L 15761888 15761937 -7249607 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 705 23 0 0 0 chr2L 15762048 15762071 -7249473 + AT_rich Low_complexity Low_complexity 1 23 0 7 705 229 107 32 45 chr2L 15762908 15763064 -7248480 - HMSBEAGLE_I LTR Gypsy -5561 968 815 7 705 408 20 0 0 chr2L 15763579 15763628 -7247916 + (TGGA)n Simple_repeat Simple_repeat 3 51 0 7 705 369 58 0 0 chr2L 15763998 15764050 -7247494 + (TAA)n Simple_repeat Simple_repeat 1 52 0 7 705 26 30 0 0 chr2L 15768624 15768657 -7242887 + AT_rich Low_complexity Low_complexity 1 33 0 7 705 23 0 0 0 chr2L 15771769 15771792 -7239752 + AT_rich Low_complexity Low_complexity 1 23 0 7 705 31 58 0 0 chr2L 15772873 15772925 -7238619 + AT_rich Low_complexity Low_complexity 1 52 0 7 705 212 211 66 19 chr2L 15773228 15773334 -7238210 + (CATATA)n Simple_repeat Simple_repeat 1 111 0 7 705 26 0 0 0 chr2L 15773498 15773524 -7238020 + AT_rich Low_complexity Low_complexity 1 26 0 7 705 226 150 0 0 chr2L 15773608 15773648 -7237896 - DNAREP1_DM LINE Penelope -537 57 18 7 705 201 204 20 0 chr2L 15776445 15776494 -7235050 + (TA)n Simple_repeat Simple_repeat 2 51 0 7 705 29 47 0 0 chr2L 15778896 15778939 -7232605 + AT_rich Low_complexity Low_complexity 1 43 0 7 705 186 43 0 0 chr2L 15779351 15779374 -7232170 + (CAT)n Simple_repeat Simple_repeat 3 25 0 7 705 216 0 0 0 chr2L 15790967 15790991 -7220553 + (A)n Simple_repeat Simple_repeat 1 24 0 7 705 185 108 27 0 chr2L 15792157 15792194 -7219350 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 705 189 74 0 0 chr2L 15793308 15793335 -7218209 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 7 705 21 36 0 0 chr2L 15793659 15793687 -7217857 + AT_rich Low_complexity Low_complexity 1 28 0 7 705 24 0 0 0 chr2L 15793700 15793724 -7217820 + AT_rich Low_complexity Low_complexity 1 24 0 7 705 261 128 0 0 chr2L 15796325 15796372 -7215172 + (ATG)n Simple_repeat Simple_repeat 3 49 0 7 705 23 0 0 0 chr2L 15796904 15796927 -7214617 + AT_rich Low_complexity Low_complexity 1 23 0 7 705 25 0 0 0 chr2L 15797232 15797257 -7214287 + AT_rich Low_complexity Low_complexity 1 25 0 7 705 25 31 0 0 chr2L 15797343 15797375 -7214169 + AT_rich Low_complexity Low_complexity 1 32 0 7 705 23 0 0 0 chr2L 15798972 15798995 -7212549 + AT_rich Low_complexity Low_complexity 1 23 0 7 705 24 32 0 0 chr2L 15801223 15801254 -7210290 + AT_rich Low_complexity Low_complexity 1 31 0 7 705 279 232 14 0 chr2L 15803464 15803533 -7208011 + (CA)n Simple_repeat Simple_repeat 1 70 0 7 705 32 26 0 0 chr2L 15804296 15804335 -7207209 + AT_rich Low_complexity Low_complexity 1 39 0 7 705 51 51 0 0 chr2L 15805543 15805622 -7205922 + AT_rich Low_complexity Low_complexity 1 79 0 7 705 39 74 0 0 chr2L 15807044 15807125 -7204419 + AT_rich Low_complexity Low_complexity 1 81 0 7 705 25 31 0 0 chr2L 15807413 15807445 -7204099 + AT_rich Low_complexity Low_complexity 1 32 0 7 705 28 61 0 0 chr2L 15807521 15807570 -7203974 + AT_rich Low_complexity Low_complexity 1 49 0 7 705 21 57 0 0 chr2L 15807937 15807972 -7203572 + AT_rich Low_complexity Low_complexity 1 35 0 7 705 22 35 0 0 chr2L 15810374 15810403 -7201141 + AT_rich Low_complexity Low_complexity 1 29 0 7 705 24 32 0 0 chr2L 15812261 15812292 -7199252 + AT_rich Low_complexity Low_complexity 1 31 0 7 705 25 31 0 0 chr2L 15814138 15814170 -7197374 + AT_rich Low_complexity Low_complexity 1 32 0 7 705 21 71 0 0 chr2L 15814912 15814954 -7196590 + AT_rich Low_complexity Low_complexity 1 42 0 7 705 23 0 0 0 chr2L 15819598 15819621 -7191923 + AT_rich Low_complexity Low_complexity 1 23 0 7 705 381 109 0 0 chr2L 15820779 15820834 -7190710 - DNAREP1_DM LINE Penelope 0 594 540 7 705 210 279 0 0 chr2L 15821979 15822040 -7189504 + (CTG)n Simple_repeat Simple_repeat 3 63 0 7 705 23 33 0 0 chr2L 15822434 15822464 -7189080 + AT_rich Low_complexity Low_complexity 1 30 0 7 705 220 179 0 0 chr2L 15825488 15825527 -7186017 + (CAG)n Simple_repeat Simple_repeat 2 40 0 7 705 4571 0 0 0 chr2L 15826914 15827413 -7184131 + TABOR_LTR LTR Gypsy 8 506 0 7 705 15533 9 4 7 chr2L 15827413 15829287 -7182257 + TABOR_I LTR Gypsy 1 3027 -3309 7 705 28 0 0 0 chr2L 15832120 15832148 -7179396 + AT_rich Low_complexity Low_complexity 1 28 0 7 705 23 0 0 0 chr2L 15832343 15832366 -7179178 + AT_rich Low_complexity Low_complexity 1 23 0 7 705 4353 0 0 10 chr2L 15838500 15839004 -7172540 - HOBO DNA hAT 0 3016 2518 7 705 7959 1 0 0 chr2L 15839002 15839906 -7171638 - HOBO DNA hAT -2112 904 1 7 705 24 77 0 0 chr2L 15842289 15842341 -7169203 + AT_rich Low_complexity Low_complexity 1 52 0 7 705 21 36 0 0 chr2L 15845163 15845191 -7166353 + AT_rich Low_complexity Low_complexity 1 28 0 7 705 32 0 0 0 chr2L 15845726 15845758 -7165786 + AT_rich Low_complexity Low_complexity 1 32 0 7 705 27 29 0 0 chr2L 15850326 15850360 -7161184 + AT_rich Low_complexity Low_complexity 1 34 0 7 705 230 254 0 0 chr2L 15850977 15851040 -7160504 + T-rich Low_complexity Low_complexity 1 63 0 7 705 180 0 0 0 chr2L 15851061 15851081 -7160463 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 705 24 100 0 0 chr2L 15851428 15851508 -7160036 + AT_rich Low_complexity Low_complexity 1 80 0 7 705 207 0 0 0 chr2L 15851847 15851870 -7159674 + (CAG)n Simple_repeat Simple_repeat 2 24 0 7 705 31 44 0 0 chr2L 15852534 15852579 -7158965 + AT_rich Low_complexity Low_complexity 1 45 0 7 705 215 205 0 0 chr2L 15859450 15859489 -7152055 + (CGA)n Simple_repeat Simple_repeat 1 39 0 7 706 23 33 0 0 chr2L 15863384 15863414 -7148130 + AT_rich Low_complexity Low_complexity 1 30 0 7 706 34 79 0 0 chr2L 15863657 15863733 -7147811 + AT_rich Low_complexity Low_complexity 1 76 0 7 706 24 0 0 0 chr2L 15864981 15865005 -7146539 + AT_rich Low_complexity Low_complexity 1 24 0 7 706 212 184 0 0 chr2L 15866262 15866300 -7145244 + A-rich Low_complexity Low_complexity 2 39 0 7 706 40 49 0 0 chr2L 15866720 15866781 -7144763 + AT_rich Low_complexity Low_complexity 1 61 0 7 706 28 0 0 0 chr2L 15868526 15868554 -7142990 + AT_rich Low_complexity Low_complexity 1 28 0 7 706 207 0 0 0 chr2L 15870326 15870349 -7141195 + (A)n Simple_repeat Simple_repeat 1 23 0 7 706 24 53 0 0 chr2L 15871427 15871465 -7140079 + AT_rich Low_complexity Low_complexity 1 38 0 7 706 25 51 0 0 chr2L 15872794 15872833 -7138711 + AT_rich Low_complexity Low_complexity 1 39 0 7 706 205 186 0 0 chr2L 15873263 15873306 -7138238 + A-rich Low_complexity Low_complexity 1 43 0 7 706 29 0 0 0 chr2L 15876101 15876130 -7135414 + AT_rich Low_complexity Low_complexity 1 29 0 7 706 21 0 0 0 chr2L 15877800 15877821 -7133723 + AT_rich Low_complexity Low_complexity 1 21 0 7 706 25 0 0 0 chr2L 15880109 15880134 -7131410 + AT_rich Low_complexity Low_complexity 1 25 0 7 706 21 89 0 0 chr2L 15882689 15882745 -7128799 + AT_rich Low_complexity Low_complexity 1 56 0 7 706 418 134 0 0 chr2L 15883513 15883580 -7127964 - DNAREP1_DM LINE Penelope -6 588 522 7 706 32 43 0 0 chr2L 15888620 15888666 -7122878 + AT_rich Low_complexity Low_complexity 1 46 0 7 706 23 0 0 0 chr2L 15891255 15891278 -7120266 + AT_rich Low_complexity Low_complexity 1 23 0 7 706 31 0 0 0 chr2L 15893297 15893328 -7118216 + AT_rich Low_complexity Low_complexity 1 31 0 7 706 24 32 0 0 chr2L 15893398 15893429 -7118115 + AT_rich Low_complexity Low_complexity 1 31 0 7 706 21 71 0 0 chr2L 15893481 15893523 -7118021 + AT_rich Low_complexity Low_complexity 1 42 0 7 706 509 254 87 77 chr2L 15894086 15894282 -7117262 + DNAREP1_DM LINE Penelope 367 564 -30 7 706 41 48 0 0 chr2L 15896678 15896740 -7114804 + AT_rich Low_complexity Low_complexity 1 62 0 7 706 180 0 0 0 chr2L 15897476 15897496 -7114048 + (CATAC)n Simple_repeat Simple_repeat 2 21 0 7 706 27 81 0 0 chr2L 15902651 15902713 -7108831 + AT_rich Low_complexity Low_complexity 1 62 0 7 706 427 182 22 22 chr2L 15902748 15902838 -7108706 - DNAREP1_DM LINE Penelope -504 90 1 7 706 293 125 0 18 chr2L 15905340 15905397 -7106147 + (TA)n Simple_repeat Simple_repeat 2 57 0 7 706 261 173 23 58 chr2L 15907500 15907586 -7103958 + (CAG)n Simple_repeat Simple_repeat 1 83 0 7 706 66 70 0 0 chr2L 15907893 15908022 -7103522 + AT_rich Low_complexity Low_complexity 1 129 0 7 706 251 236 19 9 chr2L 15908680 15908787 -7102757 + T-rich Low_complexity Low_complexity 2 109 0 7 706 26 64 0 0 chr2L 15909542 15909589 -7101955 + AT_rich Low_complexity Low_complexity 1 47 0 7 706 228 163 0 0 chr2L 15913204 15913247 -7098297 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 706 26 0 0 0 chr2L 15916563 15916589 -7094955 + AT_rich Low_complexity Low_complexity 1 26 0 7 706 42 0 0 0 chr2L 15918525 15918567 -7092977 + AT_rich Low_complexity Low_complexity 1 42 0 7 706 25 65 0 0 chr2L 15919658 15919704 -7091840 + AT_rich Low_complexity Low_complexity 1 46 0 7 706 180 111 0 0 chr2L 15920006 15920033 -7091511 + (CAT)n Simple_repeat Simple_repeat 2 28 0 7 706 28 29 0 0 chr2L 15922722 15922757 -7088787 + AT_rich Low_complexity Low_complexity 1 35 0 7 706 390 138 0 0 chr2L 15922921 15922979 -7088565 + DNAREP1_DM LINE Penelope 1 58 -536 7 706 907 202 121 80 chr2L 15922987 15923326 -7088218 + DNAREP1_DM LINE Penelope 241 593 -1 7 706 26 30 0 0 chr2L 15929741 15929774 -7081770 + AT_rich Low_complexity Low_complexity 1 33 0 7 706 23 54 0 0 chr2L 15931385 15931422 -7080122 + AT_rich Low_complexity Low_complexity 1 37 0 7 706 27 29 0 0 chr2L 15934896 15934930 -7076614 + AT_rich Low_complexity Low_complexity 1 34 0 7 706 33 100 0 0 chr2L 15937590 15937700 -7073844 + AT_rich Low_complexity Low_complexity 1 110 0 7 706 31 26 0 0 chr2L 15940230 15940268 -7071276 + AT_rich Low_complexity Low_complexity 1 38 0 7 706 22 56 0 0 chr2L 15949189 15949225 -7062319 + AT_rich Low_complexity Low_complexity 1 36 0 7 706 22 0 0 0 chr2L 15949323 15949345 -7062199 + AT_rich Low_complexity Low_complexity 1 22 0 7 706 201 74 0 0 chr2L 15949989 15950016 -7061528 + (TTG)n Simple_repeat Simple_repeat 1 27 0 7 706 23 33 0 0 chr2L 15950532 15950562 -7060982 + AT_rich Low_complexity Low_complexity 1 30 0 7 706 198 0 0 0 chr2L 15950934 15950956 -7060588 + (TATAA)n Simple_repeat Simple_repeat 2 23 0 7 706 29 28 0 0 chr2L 15951043 15951079 -7060465 + AT_rich Low_complexity Low_complexity 1 36 0 7 706 196 40 100 0 chr2L 15955161 15955211 -7056333 + (TA)n Simple_repeat Simple_repeat 2 56 0 7 706 246 62 0 0 chr2L 15955278 15955310 -7056234 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 706 7959 1 0 0 chr2L 15956081 15956985 -7054559 + HOBO DNA hAT 1 904 -2112 7 706 4353 0 0 10 chr2L 15956983 15957487 -7054057 + HOBO DNA hAT 2518 3016 0 7 706 30 45 0 0 chr2L 15959575 15959619 -7051925 + AT_rich Low_complexity Low_complexity 1 44 0 7 706 32 75 0 0 chr2L 15959639 15959706 -7051838 + AT_rich Low_complexity Low_complexity 1 67 0 7 706 21 57 0 0 chr2L 15960494 15960529 -7051015 + AT_rich Low_complexity Low_complexity 1 35 0 7 706 22 35 0 0 chr2L 15961872 15961901 -7049643 + AT_rich Low_complexity Low_complexity 1 29 0 7 706 24 53 0 0 chr2L 15962614 15962652 -7048892 + AT_rich Low_complexity Low_complexity 1 38 0 7 706 21 0 0 0 chr2L 15964521 15964542 -7047002 + AT_rich Low_complexity Low_complexity 1 21 0 7 706 191 36 0 35 chr2L 15965070 15965099 -7046445 + (CAA)n Simple_repeat Simple_repeat 1 28 0 7 706 21 36 0 0 chr2L 15970214 15970242 -7041302 + AT_rich Low_complexity Low_complexity 1 28 0 7 706 21 0 0 0 chr2L 15971550 15971571 -7039973 + AT_rich Low_complexity Low_complexity 1 21 0 7 706 194 206 14 0 chr2L 15972291 15972364 -7039180 + (TGG)n Simple_repeat Simple_repeat 1 74 0 7 706 223 167 0 0 chr2L 15972526 15972568 -7038976 + (CAGC)n Simple_repeat Simple_repeat 4 45 0 7 706 32 91 0 0 chr2L 15974278 15974366 -7037178 + AT_rich Low_complexity Low_complexity 1 88 0 7 706 216 0 0 0 chr2L 15975794 15975818 -7035726 + (ACTG)n Simple_repeat Simple_repeat 1 24 0 7 706 21 0 0 0 chr2L 15978278 15978299 -7033245 + AT_rich Low_complexity Low_complexity 1 21 0 7 706 242 155 14 40 chr2L 15980546 15980620 -7030924 + (TTAA)n Simple_repeat Simple_repeat 4 75 0 7 706 21 0 0 0 chr2L 15985406 15985427 -7026117 + AT_rich Low_complexity Low_complexity 1 21 0 7 706 23 33 0 0 chr2L 15986109 15986139 -7025405 + AT_rich Low_complexity Low_complexity 1 30 0 7 706 26 0 0 0 chr2L 15988134 15988160 -7023384 + AT_rich Low_complexity Low_complexity 1 26 0 7 707 22 35 0 0 chr2L 15993196 15993225 -7018319 + AT_rich Low_complexity Low_complexity 1 29 0 7 707 225 0 0 0 chr2L 15995077 15995102 -7016442 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 707 23 33 0 0 chr2L 15995536 15995566 -7015978 + AT_rich Low_complexity Low_complexity 1 30 0 7 707 22 0 0 0 chr2L 16001433 16001455 -7010089 + AT_rich Low_complexity Low_complexity 1 22 0 7 707 36 0 0 0 chr2L 16005032 16005068 -7006476 + AT_rich Low_complexity Low_complexity 1 36 0 7 707 204 216 0 0 chr2L 16007826 16007863 -7003681 + T-rich Low_complexity Low_complexity 1 37 0 7 707 267 79 0 0 chr2L 16010533 16010571 -7000973 + (CAGC)n Simple_repeat Simple_repeat 3 40 0 7 707 29 0 0 0 chr2L 16013747 16013776 -6997768 + AT_rich Low_complexity Low_complexity 1 29 0 7 707 21 0 0 0 chr2L 16013883 16013904 -6997640 + AT_rich Low_complexity Low_complexity 1 21 0 7 707 31 0 0 0 chr2L 16017801 16017832 -6993712 + AT_rich Low_complexity Low_complexity 1 31 0 7 707 26 64 0 0 chr2L 16020418 16020465 -6991079 + AT_rich Low_complexity Low_complexity 1 47 0 7 707 21 0 0 0 chr2L 16026777 16026798 -6984746 + AT_rich Low_complexity Low_complexity 1 21 0 7 707 35 54 0 0 chr2L 16027534 16027590 -6983954 + AT_rich Low_complexity Low_complexity 1 56 0 7 707 183 205 0 0 chr2L 16028235 16028274 -6983270 + (CATATA)n Simple_repeat Simple_repeat 3 41 0 7 707 21 0 0 0 chr2L 16032984 16033005 -6978539 + AT_rich Low_complexity Low_complexity 1 21 0 7 707 28 29 0 0 chr2L 16033595 16033630 -6977914 + AT_rich Low_complexity Low_complexity 1 35 0 7 707 192 152 0 0 chr2L 16034345 16034378 -6977166 + (CATA)n Simple_repeat Simple_repeat 3 35 0 7 707 192 135 0 0 chr2L 16036846 16036883 -6974661 + (CAT)n Simple_repeat Simple_repeat 1 37 0 7 707 221 158 26 0 chr2L 16039103 16039141 -6972403 + (CAG)n Simple_repeat Simple_repeat 3 41 0 7 707 275 175 0 0 chr2L 16040568 16040625 -6970919 - DNAREP1_DM LINE Penelope -2 592 536 7 707 280 167 37 0 chr2L 16040640 16040694 -6970850 - DNAREP1_DM LINE Penelope -538 56 1 7 707 35 103 0 0 chr2L 16041065 16041191 -6970353 + AT_rich Low_complexity Low_complexity 1 126 0 7 707 23 33 0 0 chr2L 16042127 16042157 -6969387 + AT_rich Low_complexity Low_complexity 1 30 0 7 707 26 0 0 0 chr2L 16043681 16043707 -6967837 + AT_rich Low_complexity Low_complexity 1 26 0 7 707 24 0 0 0 chr2L 16045427 16045451 -6966093 + AT_rich Low_complexity Low_complexity 1 24 0 7 707 202 219 0 0 chr2L 16047191 16047232 -6964312 + (TGG)n Simple_repeat Simple_repeat 2 42 0 7 707 21 36 0 0 chr2L 16048496 16048524 -6963020 + AT_rich Low_complexity Low_complexity 1 28 0 7 707 25 0 0 0 chr2L 16049418 16049443 -6962101 + AT_rich Low_complexity Low_complexity 1 25 0 7 707 51 17 0 0 chr2L 16049594 16049652 -6961892 + AT_rich Low_complexity Low_complexity 1 58 0 7 707 288 137 0 0 chr2L 16051536 16051587 -6959957 + (GGA)n Simple_repeat Simple_repeat 1 51 0 7 707 21 0 0 0 chr2L 16054948 16054969 -6956575 + AT_rich Low_complexity Low_complexity 1 21 0 7 707 21 0 0 0 chr2L 16059294 16059315 -6952229 + AT_rich Low_complexity Low_complexity 1 21 0 7 707 186 191 0 0 chr2L 16061236 16061283 -6950261 + (TTG)n Simple_repeat Simple_repeat 1 47 0 7 707 207 0 0 0 chr2L 16063107 16063130 -6948414 + (T)n Simple_repeat Simple_repeat 1 23 0 7 707 297 89 0 0 chr2L 16063342 16063387 -6948157 + (AACTG)n Simple_repeat Simple_repeat 4 48 0 7 707 25 0 0 0 chr2L 16067696 16067721 -6943823 + AT_rich Low_complexity Low_complexity 1 25 0 7 707 23 0 0 0 chr2L 16067926 16067949 -6943595 + AT_rich Low_complexity Low_complexity 1 23 0 7 707 21 57 0 0 chr2L 16072674 16072709 -6938835 + AT_rich Low_complexity Low_complexity 1 35 0 7 707 23 33 0 0 chr2L 16074879 16074909 -6936635 + AT_rich Low_complexity Low_complexity 1 30 0 7 707 22 0 0 0 chr2L 16075028 16075050 -6936494 + AT_rich Low_complexity Low_complexity 1 22 0 7 707 21 0 0 0 chr2L 16077523 16077544 -6934000 + AT_rich Low_complexity Low_complexity 1 21 0 7 707 250 203 34 0 chr2L 16079109 16079168 -6932376 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 707 213 218 34 11 chr2L 16081367 16081455 -6930089 + (TA)n Simple_repeat Simple_repeat 1 90 0 7 707 22 0 0 0 chr2L 16082337 16082359 -6929185 + AT_rich Low_complexity Low_complexity 1 22 0 7 707 24 0 0 0 chr2L 16085460 16085484 -6926060 + AT_rich Low_complexity Low_complexity 1 24 0 7 707 189 74 0 0 chr2L 16087710 16087737 -6923807 + (T)n Simple_repeat Simple_repeat 1 27 0 7 707 24 0 0 0 chr2L 16088089 16088113 -6923431 + AT_rich Low_complexity Low_complexity 1 24 0 7 707 186 118 0 0 chr2L 16092305 16092339 -6919205 + (TTAG)n Simple_repeat Simple_repeat 1 34 0 7 707 189 0 0 0 chr2L 16093025 16093046 -6918498 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 7 707 22 56 0 0 chr2L 16096820 16096856 -6914688 + AT_rich Low_complexity Low_complexity 1 36 0 7 707 23 0 0 0 chr2L 16102763 16102786 -6908758 + AT_rich Low_complexity Low_complexity 1 23 0 7 707 22 0 0 0 chr2L 16104967 16104989 -6906555 + AT_rich Low_complexity Low_complexity 1 22 0 7 707 22 0 0 0 chr2L 16105508 16105530 -6906014 + AT_rich Low_complexity Low_complexity 1 22 0 7 707 22 35 0 0 chr2L 16106919 16106948 -6904596 + AT_rich Low_complexity Low_complexity 1 29 0 7 707 23 0 0 0 chr2L 16108702 16108725 -6902819 + AT_rich Low_complexity Low_complexity 1 23 0 7 707 24 0 0 0 chr2L 16112481 16112505 -6899039 + AT_rich Low_complexity Low_complexity 1 24 0 7 707 183 139 0 0 chr2L 16114857 16114893 -6896651 + (ACTTG)n Simple_repeat Simple_repeat 2 37 0 7 707 321 218 205 18 chr2L 16120108 16120220 -6891324 + DNAREP1_DM LINE Penelope 403 535 -59 7 707 43 47 0 0 chr2L 16120882 16120946 -6890598 + AT_rich Low_complexity Low_complexity 1 64 0 7 707 261 0 0 0 chr2L 16121154 16121183 -6890361 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 708 21 0 0 0 chr2L 16122833 16122854 -6888690 + AT_rich Low_complexity Low_complexity 1 21 0 7 708 23 68 0 0 chr2L 16124027 16124071 -6887473 + AT_rich Low_complexity Low_complexity 1 44 0 7 708 22 35 0 0 chr2L 16127556 16127585 -6883959 + AT_rich Low_complexity Low_complexity 1 29 0 7 708 25 31 0 0 chr2L 16127611 16127643 -6883901 + AT_rich Low_complexity Low_complexity 1 32 0 7 708 243 0 0 0 chr2L 16130511 16130538 -6881006 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 708 189 0 0 0 chr2L 16132465 16132486 -6879058 + (T)n Simple_repeat Simple_repeat 1 21 0 7 708 222 91 0 0 chr2L 16132989 16133022 -6878522 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 708 30 77 0 0 chr2L 16137052 16137117 -6874427 + AT_rich Low_complexity Low_complexity 1 65 0 7 708 27 49 0 0 chr2L 16139600 16139641 -6871903 + AT_rich Low_complexity Low_complexity 1 41 0 7 708 21 36 0 0 chr2L 16140780 16140808 -6870736 + AT_rich Low_complexity Low_complexity 1 28 0 7 708 2298 7 4 4 chr2L 16141217 16141493 -6870051 + Copia_LTR LTR Copia 1 276 0 7 708 40701 2 0 1 chr2L 16141493 16146090 -6865454 + Copia_I LTR Copia 1 4593 0 7 708 2298 7 4 4 chr2L 16146090 16146366 -6865178 + Copia_LTR LTR Copia 1 276 0 7 708 272 96 39 0 chr2L 16148617 16148669 -6862875 + (TTCCG)n Simple_repeat Simple_repeat 2 55 0 7 708 23 68 0 0 chr2L 16149064 16149108 -6862436 + AT_rich Low_complexity Low_complexity 1 44 0 7 708 209 210 12 58 chr2L 16151677 16151763 -6859781 + T-rich Low_complexity Low_complexity 2 83 0 7 708 3493 5 7 10 chr2L 16153790 16154205 -6857339 - DM297_LTR LTR Gypsy 0 414 1 7 708 53277 7 0 0 chr2L 16154205 16160372 -6851172 - DM297_I LTR Gypsy 0 6167 1 7 708 3493 5 7 10 chr2L 16160372 16160787 -6850757 - DM297_LTR LTR Gypsy 0 414 1 7 708 22 0 0 0 chr2L 16161839 16161861 -6849683 + AT_rich Low_complexity Low_complexity 1 22 0 7 708 635 80 0 0 chr2L 16163405 16163493 -6848051 + BS3_DM LINE Jockey 1703 1790 0 7 708 215 143 17 67 chr2L 16163966 16164026 -6847518 + A-rich Low_complexity Low_complexity 4 60 0 7 708 25 31 0 0 chr2L 16164901 16164933 -6846611 + AT_rich Low_complexity Low_complexity 1 32 0 7 708 24 67 0 0 chr2L 16165527 16165572 -6845972 + AT_rich Low_complexity Low_complexity 1 45 0 7 708 22 35 0 0 chr2L 16171637 16171666 -6839878 + AT_rich Low_complexity Low_complexity 1 29 0 7 708 205 430 6 0 chr2L 16172304 16172462 -6839082 + (CAG)n Simple_repeat Simple_repeat 3 161 0 7 708 21 0 0 0 chr2L 16178547 16178568 -6832976 + AT_rich Low_complexity Low_complexity 1 21 0 7 708 24 53 0 0 chr2L 16185123 16185161 -6826383 + AT_rich Low_complexity Low_complexity 1 38 0 7 708 206 238 0 56 chr2L 16187733 16187822 -6823722 + (CAA)n Simple_repeat Simple_repeat 3 86 0 7 708 34 42 0 0 chr2L 16187881 16187929 -6823615 + AT_rich Low_complexity Low_complexity 1 48 0 7 708 23 68 0 0 chr2L 16188968 16189012 -6822532 + AT_rich Low_complexity Low_complexity 1 44 0 7 708 237 119 0 0 chr2L 16191013 16191055 -6820489 + (CAG)n Simple_repeat Simple_repeat 1 42 0 7 708 330 277 43 19 chr2L 16191910 16192072 -6819472 - DNAREP1_DM LINE Penelope -419 175 10 7 708 21 0 0 0 chr2L 16193616 16193637 -6817907 + AT_rich Low_complexity Low_complexity 1 21 0 7 708 24 0 0 0 chr2L 16196691 16196715 -6814829 + AT_rich Low_complexity Low_complexity 1 24 0 7 708 33 25 0 0 chr2L 16198878 16198918 -6812626 + AT_rich Low_complexity Low_complexity 1 40 0 7 708 26 30 0 0 chr2L 16201230 16201263 -6810281 + AT_rich Low_complexity Low_complexity 1 33 0 7 708 36 53 0 0 chr2L 16201329 16201386 -6810158 + AT_rich Low_complexity Low_complexity 1 57 0 7 708 204 97 0 0 chr2L 16204020 16204051 -6807493 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 708 209 196 0 0 chr2L 16204221 16204267 -6807277 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 708 23 0 0 0 chr2L 16204548 16204571 -6806973 + AT_rich Low_complexity Low_complexity 1 23 0 7 708 28 0 0 0 chr2L 16205092 16205120 -6806424 + AT_rich Low_complexity Low_complexity 1 28 0 7 708 21 36 0 0 chr2L 16208845 16208873 -6802671 + AT_rich Low_complexity Low_complexity 1 28 0 7 708 29 28 0 0 chr2L 16210381 16210417 -6801127 + AT_rich Low_complexity Low_complexity 1 36 0 7 708 255 130 0 0 chr2L 16210868 16210922 -6800622 + (T)n Simple_repeat Simple_repeat 1 54 0 7 708 23 33 0 0 chr2L 16211419 16211449 -6800095 + AT_rich Low_complexity Low_complexity 1 30 0 7 708 201 39 0 0 chr2L 16213101 16213127 -6798417 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 7 708 22 35 0 0 chr2L 16213271 16213300 -6798244 + AT_rich Low_complexity Low_complexity 1 29 0 7 708 22 56 0 0 chr2L 16214449 16214485 -6797059 + AT_rich Low_complexity Low_complexity 1 36 0 7 708 192 125 0 0 chr2L 16214902 16214934 -6796610 + (ATGGTG)n Simple_repeat Simple_repeat 4 35 0 7 708 225 94 0 0 chr2L 16215747 16215779 -6795765 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 708 21 71 0 0 chr2L 16216133 16216175 -6795369 + AT_rich Low_complexity Low_complexity 1 42 0 7 708 207 69 0 0 chr2L 16217874 16217903 -6793641 + (TTTCG)n Simple_repeat Simple_repeat 1 29 0 7 708 23 86 0 0 chr2L 16219487 16219545 -6791999 + AT_rich Low_complexity Low_complexity 1 58 0 7 708 26 50 0 0 chr2L 16224244 16224284 -6787260 + AT_rich Low_complexity Low_complexity 1 40 0 7 708 258 81 0 0 chr2L 16225348 16225385 -6786159 + (ATG)n Simple_repeat Simple_repeat 1 37 0 7 708 35 88 0 0 chr2L 16228529 16228620 -6782924 + AT_rich Low_complexity Low_complexity 1 91 0 7 708 404 193 17 26 chr2L 16229774 16229891 -6781653 + Transib-N1_DM DNA Transib 1 116 -398 7 708 21 57 0 0 chr2L 16230336 16230371 -6781173 + AT_rich Low_complexity Low_complexity 1 35 0 7 708 180 97 0 0 chr2L 16232594 16232625 -6778919 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 7 708 43 56 0 0 chr2L 16235517 16235588 -6775956 + AT_rich Low_complexity Low_complexity 1 71 0 7 708 24 53 0 0 chr2L 16237087 16237125 -6774419 + AT_rich Low_complexity Low_complexity 1 38 0 7 708 198 143 0 0 chr2L 16239656 16239691 -6771853 + (TCCG)n Simple_repeat Simple_repeat 4 38 0 7 708 261 57 0 0 chr2L 16239994 16240029 -6771515 + (TA)n Simple_repeat Simple_repeat 2 36 0 7 708 27 0 0 0 chr2L 16245626 16245653 -6765891 + AT_rich Low_complexity Low_complexity 1 27 0 7 708 222 136 0 0 chr2L 16246172 16246216 -6765328 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 708 34 0 0 0 chr2L 16249153 16249187 -6762357 + AT_rich Low_complexity Low_complexity 1 34 0 7 708 32 26 0 0 chr2L 16250376 16250415 -6761129 + AT_rich Low_complexity Low_complexity 1 39 0 7 708 23 0 0 0 chr2L 16250700 16250723 -6760821 + AT_rich Low_complexity Low_complexity 1 23 0 7 708 205 176 0 0 chr2L 16252825 16252859 -6758685 + (CATA)n Simple_repeat Simple_repeat 3 36 0 7 709 255 89 59 15 chr2L 16253775 16253843 -6757701 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 7 709 23 0 0 0 chr2L 16254770 16254793 -6756751 + AT_rich Low_complexity Low_complexity 1 23 0 7 709 23 33 0 0 chr2L 16257794 16257824 -6753720 + AT_rich Low_complexity Low_complexity 1 30 0 7 709 22 35 0 0 chr2L 16263424 16263453 -6748091 + AT_rich Low_complexity Low_complexity 1 29 0 7 709 215 93 23 0 chr2L 16264258 16264301 -6747243 + (TA)n Simple_repeat Simple_repeat 1 44 0 7 709 240 42 104 0 chr2L 16264404 16264452 -6747092 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 7 709 216 175 15 60 chr2L 16264789 16264856 -6746688 + T-rich Low_complexity Low_complexity 3 66 0 7 709 221 364 0 0 chr2L 16265212 16265300 -6746244 + (CTG)n Simple_repeat Simple_repeat 3 90 0 7 709 24 0 0 0 chr2L 16267127 16267151 -6744393 + AT_rich Low_complexity Low_complexity 1 24 0 7 709 182 108 0 51 chr2L 16270685 16270724 -6740820 + (CATA)n Simple_repeat Simple_repeat 3 39 0 7 709 22 0 0 0 chr2L 16271938 16271960 -6739584 + AT_rich Low_complexity Low_complexity 1 22 0 7 709 23 0 0 0 chr2L 16273505 16273528 -6738016 + AT_rich Low_complexity Low_complexity 1 23 0 7 709 21 0 0 0 chr2L 16275911 16275932 -6735612 + AT_rich Low_complexity Low_complexity 1 21 0 7 709 495 33 0 0 chr2L 16276240 16276301 -6735243 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 709 25 51 0 0 chr2L 16276712 16276751 -6734793 + AT_rich Low_complexity Low_complexity 1 39 0 7 709 200 176 0 0 chr2L 16280199 16280233 -6731311 + (TTCGG)n Simple_repeat Simple_repeat 1 34 0 7 709 9897 14 0 0 chr2L 16280312 16281417 -6730127 - PROTOP_A DNA P 0 1105 1 7 709 27 0 0 0 chr2L 16283343 16283370 -6728174 + AT_rich Low_complexity Low_complexity 1 27 0 7 709 186 103 0 0 chr2L 16284984 16285013 -6726531 + (GA)n Simple_repeat Simple_repeat 1 29 0 7 709 231 114 0 0 chr2L 16288792 16288836 -6722708 + (GGA)n Simple_repeat Simple_repeat 3 46 0 7 709 360 196 48 19 chr2L 16293824 16293928 -6717616 - DNAREP1_DM LINE Penelope -487 107 1 7 709 200 227 53 0 chr2L 16296563 16296638 -6714906 + (TA)n Simple_repeat Simple_repeat 1 79 0 7 709 21 0 0 0 chr2L 16296774 16296795 -6714749 + AT_rich Low_complexity Low_complexity 1 21 0 7 709 22 35 0 0 chr2L 16298197 16298226 -6713318 + AT_rich Low_complexity Low_complexity 1 29 0 7 709 21 36 0 0 chr2L 16298328 16298356 -6713188 + AT_rich Low_complexity Low_complexity 1 28 0 7 709 216 111 0 0 chr2L 16299635 16299671 -6711873 + (TC)n Simple_repeat Simple_repeat 2 37 0 7 709 26 30 0 0 chr2L 16303483 16303516 -6708028 + AT_rich Low_complexity Low_complexity 1 33 0 7 709 37 52 0 0 chr2L 16307177 16307235 -6704309 + AT_rich Low_complexity Low_complexity 1 58 0 7 709 28 0 0 0 chr2L 16311036 16311064 -6700480 + AT_rich Low_complexity Low_complexity 1 28 0 7 709 285 246 0 14 chr2L 16313811 16313885 -6697659 + (CA)n Simple_repeat Simple_repeat 1 73 0 7 709 188 115 81 16 chr2L 16314176 16314238 -6697306 + T-rich Low_complexity Low_complexity 1 66 0 7 709 21 71 0 0 chr2L 16315654 16315696 -6695848 + AT_rich Low_complexity Low_complexity 1 42 0 7 709 26 0 0 0 chr2L 16315982 16316008 -6695536 + AT_rich Low_complexity Low_complexity 1 26 0 7 709 195 42 0 0 chr2L 16318268 16318292 -6693252 + (CGA)n Simple_repeat Simple_repeat 2 25 0 7 709 180 0 0 0 chr2L 16319545 16319565 -6691979 + (CTA)n Simple_repeat Simple_repeat 2 21 0 7 709 22 0 0 0 chr2L 16324098 16324120 -6687424 + AT_rich Low_complexity Low_complexity 1 22 0 7 709 222 191 0 0 chr2L 16324628 16324670 -6686874 + CT-rich Low_complexity Low_complexity 2 43 0 7 709 24 0 0 0 chr2L 16326468 16326492 -6685052 + AT_rich Low_complexity Low_complexity 1 24 0 7 709 23 33 0 0 chr2L 16326658 16326688 -6684856 + AT_rich Low_complexity Low_complexity 1 30 0 7 709 21 89 0 0 chr2L 16326772 16326828 -6684716 + AT_rich Low_complexity Low_complexity 1 56 0 7 709 23 78 0 0 chr2L 16330458 16330509 -6681035 + AT_rich Low_complexity Low_complexity 1 51 0 7 709 207 88 0 0 chr2L 16330566 16330600 -6680944 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 709 209 171 0 0 chr2L 16344930 16344965 -6666579 + CT-rich Low_complexity Low_complexity 2 36 0 7 709 26 30 0 0 chr2L 16350555 16350588 -6660956 + AT_rich Low_complexity Low_complexity 1 33 0 7 709 228 245 0 0 chr2L 16352094 16352147 -6659397 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 709 21 71 0 0 chr2L 16352771 16352813 -6658731 + AT_rich Low_complexity Low_complexity 1 42 0 7 709 203 197 42 14 chr2L 16358414 16358486 -6653058 + (TAAA)n Simple_repeat Simple_repeat 4 77 0 7 709 21 0 0 0 chr2L 16361363 16361384 -6650160 + AT_rich Low_complexity Low_complexity 1 21 0 7 709 22 0 0 0 chr2L 16361738 16361760 -6649784 + AT_rich Low_complexity Low_complexity 1 22 0 7 709 195 129 0 0 chr2L 16361814 16361845 -6649699 + (TA)n Simple_repeat Simple_repeat 1 31 0 7 709 21 0 0 0 chr2L 16362112 16362133 -6649411 + AT_rich Low_complexity Low_complexity 1 21 0 7 709 22 99 0 0 chr2L 16365347 16365418 -6646126 + AT_rich Low_complexity Low_complexity 1 71 0 7 709 29 47 0 0 chr2L 16365454 16365497 -6646047 + AT_rich Low_complexity Low_complexity 1 43 0 7 709 21 36 0 0 chr2L 16366866 16366894 -6644650 + AT_rich Low_complexity Low_complexity 1 28 0 7 709 217 139 0 27 chr2L 16367286 16367323 -6644221 + (CATA)n Simple_repeat Simple_repeat 1 36 0 7 709 180 176 0 0 chr2L 16369141 16369175 -6642369 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 709 26 30 0 0 chr2L 16370767 16370800 -6640744 + AT_rich Low_complexity Low_complexity 1 33 0 7 709 183 42 0 0 chr2L 16371569 16371593 -6639951 + (TC)n Simple_repeat Simple_repeat 1 24 0 7 709 23 0 0 0 chr2L 16372559 16372582 -6638962 + AT_rich Low_complexity Low_complexity 1 23 0 7 709 22 35 0 0 chr2L 16374178 16374207 -6637337 + AT_rich Low_complexity Low_complexity 1 29 0 7 709 21 0 0 0 chr2L 16375031 16375052 -6636492 + AT_rich Low_complexity Low_complexity 1 21 0 7 709 33 0 0 0 chr2L 16376665 16376698 -6634846 + AT_rich Low_complexity Low_complexity 1 33 0 7 709 24 0 0 0 chr2L 16377008 16377032 -6634512 + AT_rich Low_complexity Low_complexity 1 24 0 7 709 25 0 0 0 chr2L 16377303 16377328 -6634216 + AT_rich Low_complexity Low_complexity 1 25 0 7 709 23 0 0 0 chr2L 16379642 16379665 -6631879 + AT_rich Low_complexity Low_complexity 1 23 0 7 709 222 174 0 0 chr2L 16379886 16379932 -6631612 + (TGG)n Simple_repeat Simple_repeat 2 47 0 7 709 27 29 0 0 chr2L 16381934 16381968 -6629576 + AT_rich Low_complexity Low_complexity 1 34 0 7 709 31 26 0 0 chr2L 16383901 16383939 -6627605 + AT_rich Low_complexity Low_complexity 1 38 0 7 710 28 29 0 0 chr2L 16385018 16385053 -6626491 + AT_rich Low_complexity Low_complexity 1 35 0 7 710 198 174 0 0 chr2L 16385803 16385849 -6625695 + T-rich Low_complexity Low_complexity 1 46 0 7 710 39 22 0 0 chr2L 16386359 16386405 -6625139 + AT_rich Low_complexity Low_complexity 1 46 0 7 710 189 0 0 0 chr2L 16388022 16388043 -6623501 + (CAGC)n Simple_repeat Simple_repeat 1 21 0 7 710 22 35 0 0 chr2L 16389863 16389892 -6621652 + AT_rich Low_complexity Low_complexity 1 29 0 7 710 22 56 0 0 chr2L 16391767 16391803 -6619741 + AT_rich Low_complexity Low_complexity 1 36 0 7 710 212 200 60 0 chr2L 16393503 16393553 -6617991 + A-rich Low_complexity Low_complexity 5 57 0 7 710 25 65 0 0 chr2L 16398528 16398574 -6612970 + AT_rich Low_complexity Low_complexity 1 46 0 7 710 22 35 0 0 chr2L 16406669 16406698 -6604846 + AT_rich Low_complexity Low_complexity 1 29 0 7 710 234 0 0 0 chr2L 16407080 16407106 -6604438 + (GTATG)n Simple_repeat Simple_repeat 1 26 0 7 710 23 54 0 0 chr2L 16407577 16407614 -6603930 + AT_rich Low_complexity Low_complexity 1 37 0 7 710 22 0 0 0 chr2L 16409392 16409414 -6602130 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 26 64 0 0 chr2L 16413267 16413314 -6598230 + AT_rich Low_complexity Low_complexity 1 47 0 7 710 204 40 0 0 chr2L 16413668 16413693 -6597851 + (CAA)n Simple_repeat Simple_repeat 1 25 0 7 710 216 200 0 0 chr2L 16413740 16413785 -6597759 + (TTG)n Simple_repeat Simple_repeat 2 46 0 7 710 33 0 0 0 chr2L 16418156 16418189 -6593355 + AT_rich Low_complexity Low_complexity 1 33 0 7 710 22 0 0 0 chr2L 16419886 16419908 -6591636 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 37 102 0 0 chr2L 16421622 16421750 -6589794 + AT_rich Low_complexity Low_complexity 1 128 0 7 710 213 132 0 0 chr2L 16422825 16422863 -6588681 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 710 242 280 0 0 chr2L 16422992 16423067 -6588477 + T-rich Low_complexity Low_complexity 2 76 0 7 710 231 289 21 0 chr2L 16423191 16423288 -6588256 + CT-rich Low_complexity Low_complexity 5 103 0 7 710 25 51 0 0 chr2L 16423667 16423706 -6587838 + AT_rich Low_complexity Low_complexity 1 39 0 7 710 21 100 0 0 chr2L 16423813 16423883 -6587661 + AT_rich Low_complexity Low_complexity 1 70 0 7 710 24 67 0 0 chr2L 16423894 16423939 -6587605 + AT_rich Low_complexity Low_complexity 1 45 0 7 710 33 0 0 0 chr2L 16426081 16426114 -6585430 + AT_rich Low_complexity Low_complexity 1 33 0 7 710 35 0 0 0 chr2L 16427241 16427276 -6584268 + AT_rich Low_complexity Low_complexity 1 35 0 7 710 21 0 0 0 chr2L 16429649 16429670 -6581874 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 24 0 0 0 chr2L 16432542 16432566 -6578978 + AT_rich Low_complexity Low_complexity 1 24 0 7 710 216 0 0 0 chr2L 16434989 16435013 -6576531 + (TTAAG)n Simple_repeat Simple_repeat 3 26 0 7 710 23 0 0 0 chr2L 16437331 16437354 -6574190 + AT_rich Low_complexity Low_complexity 1 23 0 7 710 25 0 0 0 chr2L 16437415 16437440 -6574104 + AT_rich Low_complexity Low_complexity 1 25 0 7 710 249 33 0 0 chr2L 16438338 16438368 -6573176 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 710 223 191 0 0 chr2L 16439560 16439602 -6571942 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 710 30 0 0 0 chr2L 16441164 16441194 -6570350 + AT_rich Low_complexity Low_complexity 1 30 0 7 710 186 150 0 0 chr2L 16442762 16442802 -6568742 + (ACTG)n Simple_repeat Simple_repeat 2 41 0 7 710 25 31 0 0 chr2L 16444844 16444876 -6566668 + AT_rich Low_complexity Low_complexity 1 32 0 7 710 200 132 0 26 chr2L 16448602 16448641 -6562903 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 7 710 25 31 0 0 chr2L 16453247 16453279 -6558265 + AT_rich Low_complexity Low_complexity 1 32 0 7 710 21 0 0 0 chr2L 16453328 16453349 -6558195 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 22 0 0 0 chr2L 16453920 16453942 -6557602 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 189 214 0 0 chr2L 16456580 16456622 -6554922 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 710 22 35 0 0 chr2L 16461541 16461570 -6549974 + AT_rich Low_complexity Low_complexity 1 29 0 7 710 28 29 0 0 chr2L 16462448 16462483 -6549061 + AT_rich Low_complexity Low_complexity 1 35 0 7 710 308 64 0 21 chr2L 16463816 16463864 -6547680 + (CAA)n Simple_repeat Simple_repeat 3 49 0 7 710 22 0 0 0 chr2L 16464356 16464378 -6547166 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 216 0 0 0 chr2L 16465446 16465470 -6546074 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 710 27 29 0 0 chr2L 16465940 16465974 -6545570 + AT_rich Low_complexity Low_complexity 1 34 0 7 710 33 0 0 0 chr2L 16466519 16466552 -6544992 + AT_rich Low_complexity Low_complexity 1 33 0 7 710 31 58 0 0 chr2L 16466887 16466939 -6544605 + AT_rich Low_complexity Low_complexity 1 52 0 7 710 222 105 0 0 chr2L 16468129 16468167 -6543377 + (CTG)n Simple_repeat Simple_repeat 3 40 0 7 710 273 163 0 0 chr2L 16469024 16469073 -6542471 + (TTG)n Simple_repeat Simple_repeat 2 50 0 7 710 31 44 0 0 chr2L 16469859 16469904 -6541640 + AT_rich Low_complexity Low_complexity 1 45 0 7 710 205 200 55 0 chr2L 16470233 16470288 -6541256 + (CATTC)n Simple_repeat Simple_repeat 5 62 0 7 710 227 208 0 0 chr2L 16470628 16470676 -6540868 + T-rich Low_complexity Low_complexity 1 48 0 7 710 33 0 0 0 chr2L 16471817 16471850 -6539694 + AT_rich Low_complexity Low_complexity 1 33 0 7 710 216 135 0 0 chr2L 16473920 16473957 -6537587 + (TA)n Simple_repeat Simple_repeat 2 38 0 7 710 21 0 0 0 chr2L 16475805 16475826 -6535718 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 252 172 0 0 chr2L 16477981 16478039 -6533505 + (CGAAT)n Simple_repeat Simple_repeat 3 60 0 7 710 21 0 0 0 chr2L 16479492 16479513 -6532031 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 22 35 0 0 chr2L 16479652 16479681 -6531863 + AT_rich Low_complexity Low_complexity 1 29 0 7 710 297 125 0 0 chr2L 16479681 16479737 -6531807 + (T)n Simple_repeat Simple_repeat 1 56 0 7 710 26 50 0 0 chr2L 16480824 16480864 -6530680 + AT_rich Low_complexity Low_complexity 1 40 0 7 710 24 32 0 0 chr2L 16482250 16482281 -6529263 + AT_rich Low_complexity Low_complexity 1 31 0 7 710 348 138 0 0 chr2L 16484321 16484386 -6527158 + (CTG)n Simple_repeat Simple_repeat 3 67 0 7 710 355 65 0 46 chr2L 16484548 16484613 -6526931 + (CTG)n Simple_repeat Simple_repeat 1 62 0 7 710 21 0 0 0 chr2L 16490336 16490357 -6521187 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 22 35 0 0 chr2L 16498310 16498339 -6513205 + AT_rich Low_complexity Low_complexity 1 29 0 7 710 219 133 0 0 chr2L 16498619 16498664 -6512880 + (A)n Simple_repeat Simple_repeat 1 45 0 7 710 201 146 0 0 chr2L 16499820 16499868 -6511676 + (ATG)n Simple_repeat Simple_repeat 1 48 0 7 710 21 82 0 0 chr2L 16500000 16500049 -6511495 + AT_rich Low_complexity Low_complexity 1 49 0 7 710 21 36 0 0 chr2L 16500588 16500616 -6510928 + AT_rich Low_complexity Low_complexity 1 28 0 7 710 22 70 0 0 chr2L 16501157 16501200 -6510344 + AT_rich Low_complexity Low_complexity 1 43 0 7 710 23 33 0 0 chr2L 16501597 16501627 -6509917 + AT_rich Low_complexity Low_complexity 1 30 0 7 710 261 130 28 42 chr2L 16501736 16501808 -6509736 + ROO_I LTR Pao 662 732 -7524 7 710 29 28 0 0 chr2L 16502388 16502424 -6509120 + AT_rich Low_complexity Low_complexity 1 36 0 7 710 203 171 0 0 chr2L 16508308 16508349 -6503195 + T-rich Low_complexity Low_complexity 1 41 0 7 710 213 132 0 0 chr2L 16508480 16508518 -6503026 + (TA)n Simple_repeat Simple_repeat 1 38 0 7 710 225 250 24 12 chr2L 16508876 16508961 -6502583 + (TA)n Simple_repeat Simple_repeat 2 87 0 7 710 246 81 0 0 chr2L 16510678 16510715 -6500829 + (CCA)n Simple_repeat Simple_repeat 1 37 0 7 710 422 169 0 0 chr2L 16510782 16510871 -6500673 - ROO_I LTR Pao -7531 725 637 7 710 26 0 0 0 chr2L 16511707 16511733 -6499811 + AT_rich Low_complexity Low_complexity 1 26 0 7 710 2421 8 0 0 chr2L 16512017 16512283 -6499261 + DMLTR5 LTR Gypsy 1 266 0 7 710 6889 1 0 0 chr2L 16512282 16513078 -6498466 + HMSBEAGLE_I LTR Gypsy 1 796 -5733 7 710 974 29 52 12 chr2L 16513078 16513250 -6498294 + (TTA)n Simple_repeat Simple_repeat 1 179 0 7 88 50595 0 1 0 chr2L 16513250 16518808 -6492736 + HMSBEAGLE_I LTR Gypsy 969 6529 0 7 711 2421 8 0 0 chr2L 16518808 16519074 -6492470 + DMLTR5 LTR Gypsy 1 266 0 7 711 29 0 0 0 chr2L 16519735 16519764 -6491780 + AT_rich Low_complexity Low_complexity 1 29 0 7 711 195 42 0 0 chr2L 16520044 16520068 -6491476 + (TTA)n Simple_repeat Simple_repeat 2 25 0 7 711 195 69 0 0 chr2L 16520086 16520115 -6491429 + (T)n Simple_repeat Simple_repeat 1 29 0 7 711 188 143 0 23 chr2L 16521440 16521483 -6490061 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 711 215 173 77 0 chr2L 16521543 16521595 -6489949 + (CTCG)n Simple_repeat Simple_repeat 1 56 0 7 711 22 35 0 0 chr2L 16522112 16522141 -6489403 + AT_rich Low_complexity Low_complexity 1 29 0 7 711 254 143 20 0 chr2L 16523162 16523211 -6488333 + (CATA)n Simple_repeat Simple_repeat 3 52 0 7 711 21 0 0 0 chr2L 16523651 16523672 -6487872 + AT_rich Low_complexity Low_complexity 1 21 0 7 711 28 48 0 0 chr2L 16524700 16524742 -6486802 + AT_rich Low_complexity Low_complexity 1 42 0 7 711 210 147 0 0 chr2L 16525979 16526013 -6485531 + (CAA)n Simple_repeat Simple_repeat 2 35 0 7 711 246 105 0 0 chr2L 16528225 16528263 -6483281 + (TA)n Simple_repeat Simple_repeat 1 38 0 7 711 22 0 0 0 chr2L 16530629 16530651 -6480893 + AT_rich Low_complexity Low_complexity 1 22 0 7 711 203 185 42 42 chr2L 16530968 16531064 -6480480 + (TTTG)n Simple_repeat Simple_repeat 1 96 0 7 711 30 27 0 0 chr2L 16532221 16532258 -6479286 + AT_rich Low_complexity Low_complexity 1 37 0 7 711 23 0 0 0 chr2L 16532360 16532383 -6479161 + AT_rich Low_complexity Low_complexity 1 23 0 7 711 21 0 0 0 chr2L 16533864 16533885 -6477659 + AT_rich Low_complexity Low_complexity 1 21 0 7 711 30 45 0 0 chr2L 16533915 16533959 -6477585 + AT_rich Low_complexity Low_complexity 1 44 0 7 711 202 150 25 0 chr2L 16534272 16534312 -6477232 + CT-rich Low_complexity Low_complexity 1 41 0 7 711 48 18 0 0 chr2L 16534762 16534817 -6476727 + AT_rich Low_complexity Low_complexity 1 55 0 7 711 31 0 0 0 chr2L 16537616 16537647 -6473897 + AT_rich Low_complexity Low_complexity 1 31 0 7 711 202 235 14 14 chr2L 16538285 16538354 -6473190 + (TTG)n Simple_repeat Simple_repeat 2 70 0 7 711 29 78 0 0 chr2L 16540284 16540348 -6471196 + AT_rich Low_complexity Low_complexity 1 64 0 7 711 21 57 0 0 chr2L 16540374 16540409 -6471135 + AT_rich Low_complexity Low_complexity 1 35 0 7 711 22 35 0 0 chr2L 16540572 16540601 -6470943 + AT_rich Low_complexity Low_complexity 1 29 0 7 711 244 175 35 0 chr2L 16541703 16541760 -6469784 + T-rich Low_complexity Low_complexity 2 60 0 7 711 22 56 0 0 chr2L 16541835 16541871 -6469673 + AT_rich Low_complexity Low_complexity 1 36 0 7 711 23 0 0 0 chr2L 16541899 16541922 -6469622 + AT_rich Low_complexity Low_complexity 1 23 0 7 711 198 171 0 0 chr2L 16542179 16542220 -6469324 + T-rich Low_complexity Low_complexity 5 45 0 7 711 23 0 0 0 chr2L 16542829 16542852 -6468692 + AT_rich Low_complexity Low_complexity 1 23 0 7 711 21 0 0 0 chr2L 16544207 16544228 -6467316 + AT_rich Low_complexity Low_complexity 1 21 0 7 711 225 260 13 0 chr2L 16545354 16545431 -6466113 + A-rich Low_complexity Low_complexity 2 79 0 7 711 56 0 0 0 chr2L 16546374 16546430 -6465114 + AT_rich Low_complexity Low_complexity 1 56 0 7 711 25 0 0 0 chr2L 16547014 16547039 -6464505 + AT_rich Low_complexity Low_complexity 1 25 0 7 711 27 49 0 0 chr2L 16547174 16547215 -6464329 + AT_rich Low_complexity Low_complexity 1 41 0 7 711 247 292 0 0 chr2L 16548306 16548378 -6463166 + CT-rich Low_complexity Low_complexity 2 73 0 7 711 24 0 0 0 chr2L 16548497 16548521 -6463023 + AT_rich Low_complexity Low_complexity 1 24 0 7 711 28 29 0 0 chr2L 16548587 16548622 -6462922 + AT_rich Low_complexity Low_complexity 1 35 0 7 711 225 0 0 0 chr2L 16549297 16549322 -6462222 + (T)n Simple_repeat Simple_repeat 1 25 0 7 711 22 70 0 0 chr2L 16551085 16551128 -6460416 + AT_rich Low_complexity Low_complexity 1 43 0 7 711 36 53 0 0 chr2L 16552633 16552690 -6458854 + AT_rich Low_complexity Low_complexity 1 57 0 7 711 31 0 0 0 chr2L 16555082 16555113 -6456431 + AT_rich Low_complexity Low_complexity 1 31 0 7 711 22 0 0 0 chr2L 16555588 16555610 -6455934 + AT_rich Low_complexity Low_complexity 1 22 0 7 711 23 33 0 0 chr2L 16556048 16556078 -6455466 + AT_rich Low_complexity Low_complexity 1 30 0 7 711 22 35 0 0 chr2L 16556511 16556540 -6455004 + AT_rich Low_complexity Low_complexity 1 29 0 7 711 24 0 0 0 chr2L 16557698 16557722 -6453822 + AT_rich Low_complexity Low_complexity 1 24 0 7 711 236 106 29 43 chr2L 16558915 16558984 -6452560 + ROO_I LTR Pao 659 726 -7530 7 711 237 177 0 86 chr2L 16559167 16559272 -6452272 + ROO_I LTR Pao 651 746 -7510 7 711 330 195 0 0 chr2L 16559354 16559441 -6452103 + (CAG)n Simple_repeat Simple_repeat 2 88 0 7 711 318 50 0 0 chr2L 16559658 16559698 -6451846 + (CAG)n Simple_repeat Simple_repeat 1 40 0 7 711 366 129 0 0 chr2L 16559844 16559906 -6451638 + (CAG)n Simple_repeat Simple_repeat 1 62 0 7 711 23 0 0 0 chr2L 16560812 16560835 -6450709 + AT_rich Low_complexity Low_complexity 1 23 0 7 711 30 27 0 0 chr2L 16561837 16561874 -6449670 + AT_rich Low_complexity Low_complexity 1 37 0 7 711 22 56 0 0 chr2L 16561975 16562011 -6449533 + AT_rich Low_complexity Low_complexity 1 36 0 7 711 210 206 0 0 chr2L 16562498 16562561 -6448983 + T-rich Low_complexity Low_complexity 1 63 0 7 711 249 108 0 0 chr2L 16562919 16562956 -6448588 + (TTCGG)n Simple_repeat Simple_repeat 4 40 0 7 711 47 19 0 0 chr2L 16563398 16563452 -6448092 + AT_rich Low_complexity Low_complexity 1 54 0 7 711 211 149 0 60 chr2L 16567744 16567794 -6443750 + T-rich Low_complexity Low_complexity 1 47 0 7 711 29 84 0 0 chr2L 16569610 16569681 -6441863 + AT_rich Low_complexity Low_complexity 1 71 0 8 711 25 0 0 0 chr2L 16569756 16569781 -6441763 + AT_rich Low_complexity Low_complexity 1 25 0 8 711 216 163 0 0 chr2L 16569954 16569997 -6441547 + (CAG)n Simple_repeat Simple_repeat 2 44 0 8 711 267 182 0 0 chr2L 16570186 16570263 -6441281 + (TG)n Simple_repeat Simple_repeat 1 77 0 8 711 24 32 0 0 chr2L 16570652 16570683 -6440861 + AT_rich Low_complexity Low_complexity 1 31 0 8 711 23 0 0 0 chr2L 16570737 16570760 -6440784 + AT_rich Low_complexity Low_complexity 1 23 0 8 711 29 0 0 0 chr2L 16570772 16570801 -6440743 + AT_rich Low_complexity Low_complexity 1 29 0 8 711 46 19 0 0 chr2L 16571073 16571126 -6440418 + AT_rich Low_complexity Low_complexity 1 53 0 8 711 309 109 0 0 chr2L 16573278 16573324 -6438220 + (CAG)n Simple_repeat Simple_repeat 2 47 0 8 711 21 36 0 0 chr2L 16573945 16573973 -6437571 + AT_rich Low_complexity Low_complexity 1 28 0 8 711 28 91 0 0 chr2L 16574059 16574136 -6437408 + AT_rich Low_complexity Low_complexity 1 77 0 8 711 21 0 0 0 chr2L 16574866 16574887 -6436657 + AT_rich Low_complexity Low_complexity 1 21 0 8 711 416 123 0 0 chr2L 16576866 16576931 -6434613 - DNAREP1_DM LINE Penelope 0 594 530 8 711 202 234 0 0 chr2L 16577660 16577707 -6433837 + A-rich Low_complexity Low_complexity 1 47 0 8 711 22 113 0 0 chr2L 16578612 16578718 -6432826 + AT_rich Low_complexity Low_complexity 1 106 0 8 711 23 33 0 0 chr2L 16584130 16584160 -6427384 + AT_rich Low_complexity Low_complexity 1 30 0 8 711 37 69 0 0 chr2L 16584579 16584651 -6426893 + AT_rich Low_complexity Low_complexity 1 72 0 8 711 240 149 0 0 chr2L 16588081 16588128 -6423416 + (GA)n Simple_repeat Simple_repeat 2 48 0 8 711 206 241 19 0 chr2L 16588287 16588341 -6423203 + GA-rich Low_complexity Low_complexity 2 56 0 8 711 24 67 0 0 chr2L 16588452 16588497 -6423047 + AT_rich Low_complexity Low_complexity 1 45 0 8 711 187 54 26 26 chr2L 16588902 16588940 -6422604 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 8 711 27 87 0 0 chr2L 16589366 16589435 -6422109 + AT_rich Low_complexity Low_complexity 1 69 0 8 711 299 169 384 27 chr2L 16589512 16589658 -6421886 - DNAREP1_DM LINE Penelope -15 579 382 8 711 276 180 234 0 chr2L 16589670 16589781 -6421763 - DNAREP1_DM LINE Penelope -390 204 68 8 711 25 51 0 0 chr2L 16589869 16589908 -6421636 + AT_rich Low_complexity Low_complexity 1 39 0 8 711 24 32 0 0 chr2L 16590929 16590960 -6420584 + AT_rich Low_complexity Low_complexity 1 31 0 8 711 29 0 0 0 chr2L 16590973 16591002 -6420542 + AT_rich Low_complexity Low_complexity 1 29 0 8 711 33 73 0 0 chr2L 16591709 16591777 -6419767 + AT_rich Low_complexity Low_complexity 1 68 0 8 711 195 114 0 0 chr2L 16593919 16593954 -6417590 + (ATG)n Simple_repeat Simple_repeat 2 36 0 8 711 25 0 0 0 chr2L 16596219 16596244 -6415300 + AT_rich Low_complexity Low_complexity 1 25 0 8 711 45 0 0 0 chr2L 16596915 16596960 -6414584 + AT_rich Low_complexity Low_complexity 1 45 0 8 711 198 0 0 0 chr2L 16597676 16597698 -6413846 + (CA)n Simple_repeat Simple_repeat 1 22 0 8 711 180 176 0 0 chr2L 16597764 16597798 -6413746 + CT-rich Low_complexity Low_complexity 2 35 0 8 711 272 148 16 0 chr2L 16600287 16600348 -6411196 + (TATG)n Simple_repeat Simple_repeat 1 62 0 8 711 25 31 0 0 chr2L 16602175 16602207 -6409337 + AT_rich Low_complexity Low_complexity 1 32 0 8 711 246 231 25 13 chr2L 16611319 16611398 -6400146 + (TA)n Simple_repeat Simple_repeat 1 80 0 8 711 204 40 0 0 chr2L 16613131 16613156 -6398388 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 711 212 59 29 0 chr2L 16613308 16613342 -6398202 + (TTTTTA)n Simple_repeat Simple_repeat 4 38 0 8 711 22 35 0 0 chr2L 16613951 16613980 -6397564 + AT_rich Low_complexity Low_complexity 1 29 0 8 711 21 0 0 0 chr2L 16615420 16615441 -6396103 + AT_rich Low_complexity Low_complexity 1 21 0 8 711 216 97 0 0 chr2L 16615955 16615986 -6395558 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 711 25 31 0 0 chr2L 16616169 16616201 -6395343 + AT_rich Low_complexity Low_complexity 1 32 0 8 711 183 42 0 0 chr2L 16617252 16617276 -6394268 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 711 23 78 0 0 chr2L 16618944 16618995 -6392549 + AT_rich Low_complexity Low_complexity 1 51 0 8 711 243 196 18 0 chr2L 16619333 16619389 -6392155 + GA-rich Low_complexity Low_complexity 2 58 0 8 711 232 239 80 0 chr2L 16621955 16622043 -6389501 + ROO_I LTR Pao 641 735 -7521 8 711 320 120 0 115 chr2L 16622171 16622275 -6389269 + ROO_I LTR Pao 641 732 -7524 8 711 188 86 29 0 chr2L 16623260 16623295 -6388249 + (CATCC)n Simple_repeat Simple_repeat 4 39 0 8 711 24 53 0 0 chr2L 16623811 16623849 -6387695 + AT_rich Low_complexity Low_complexity 1 38 0 8 711 227 204 0 0 chr2L 16630881 16630947 -6380597 + (TA)n Simple_repeat Simple_repeat 1 66 0 8 711 25 0 0 0 chr2L 16632288 16632313 -6379231 + AT_rich Low_complexity Low_complexity 1 25 0 8 711 22 0 0 0 chr2L 16633157 16633179 -6378365 + AT_rich Low_complexity Low_complexity 1 22 0 8 711 21 0 0 0 chr2L 16633320 16633341 -6378203 + AT_rich Low_complexity Low_complexity 1 21 0 8 711 22 35 0 0 chr2L 16633870 16633899 -6377645 + AT_rich Low_complexity Low_complexity 1 29 0 8 711 28 0 0 0 chr2L 16634063 16634091 -6377453 + AT_rich Low_complexity Low_complexity 1 28 0 8 711 28 0 0 0 chr2L 16636194 16636222 -6375322 + AT_rich Low_complexity Low_complexity 1 28 0 8 711 233 47 0 104 chr2L 16640961 16641009 -6370535 + T-rich Low_complexity Low_complexity 1 43 0 8 711 23 0 0 0 chr2L 16641147 16641170 -6370374 + AT_rich Low_complexity Low_complexity 1 23 0 8 711 22 0 0 0 chr2L 16642560 16642582 -6368962 + AT_rich Low_complexity Low_complexity 1 22 0 8 711 210 191 0 0 chr2L 16642800 16642842 -6368702 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 711 214 184 0 0 chr2L 16643693 16643731 -6367813 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 8 712 25 51 0 0 chr2L 16648804 16648843 -6362701 + AT_rich Low_complexity Low_complexity 1 39 0 8 712 24 53 0 0 chr2L 16652235 16652273 -6359271 + AT_rich Low_complexity Low_complexity 1 38 0 8 712 335 300 0 0 chr2L 16657573 16657702 -6353842 + (CAG)n Simple_repeat Simple_repeat 1 129 0 8 712 212 292 0 0 chr2L 16657782 16657854 -6353690 + (CA)n Simple_repeat Simple_repeat 1 72 0 8 712 231 114 0 0 chr2L 16661400 16661435 -6350109 + (CACCAT)n Simple_repeat Simple_repeat 4 38 0 8 712 233 135 19 0 chr2L 16662662 16662714 -6348830 + (TA)n Simple_repeat Simple_repeat 1 53 0 8 712 186 43 0 0 chr2L 16662869 16662892 -6348652 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 8 712 27 29 0 0 chr2L 16662971 16663005 -6348539 + AT_rich Low_complexity Low_complexity 1 34 0 8 712 224 228 0 0 chr2L 16663067 16663124 -6348420 + A-rich Low_complexity Low_complexity 1 57 0 8 712 204 143 0 58 chr2L 16663174 16663226 -6348318 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 8 712 35 54 0 0 chr2L 16663256 16663312 -6348232 + AT_rich Low_complexity Low_complexity 1 56 0 8 712 21 0 0 0 chr2L 16663457 16663478 -6348066 + AT_rich Low_complexity Low_complexity 1 21 0 8 712 315 71 0 0 chr2L 16663761 16663803 -6347741 + (TA)n Simple_repeat Simple_repeat 1 42 0 8 712 217 0 0 57 chr2L 16663977 16664012 -6347532 + (CTTTG)n Simple_repeat Simple_repeat 2 34 0 8 712 426 183 0 0 chr2L 16665653 16665724 -6345820 + DNAREP1_DM LINE Penelope 1 71 -523 8 712 186 43 0 0 chr2L 16671252 16671275 -6340269 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 712 207 184 0 0 chr2L 16674000 16674038 -6337506 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 712 207 0 0 0 chr2L 16676175 16676198 -6335346 + (CA)n Simple_repeat Simple_repeat 1 23 0 8 712 21 0 0 0 chr2L 16677232 16677253 -6334291 + AT_rich Low_complexity Low_complexity 1 21 0 8 712 3473 96 55 9 chr2L 16679134 16679701 -6331843 + DNAREP1_DM LINE Penelope 1 593 -1 8 712 27 81 0 0 chr2L 16679768 16679830 -6331714 + AT_rich Low_complexity Low_complexity 1 62 0 8 712 23 33 0 0 chr2L 16681615 16681645 -6329899 + AT_rich Low_complexity Low_complexity 1 30 0 8 712 22 0 0 0 chr2L 16681690 16681712 -6329832 + AT_rich Low_complexity Low_complexity 1 22 0 8 712 183 100 0 0 chr2L 16683970 16684000 -6327544 + (CATA)n Simple_repeat Simple_repeat 3 32 0 8 712 32 81 0 0 chr2L 16688765 16688839 -6322705 + AT_rich Low_complexity Low_complexity 1 74 0 8 712 30 59 0 0 chr2L 16689397 16689448 -6322096 + AT_rich Low_complexity Low_complexity 1 51 0 8 712 215 146 24 0 chr2L 16690586 16690627 -6320917 + CT-rich Low_complexity Low_complexity 2 43 0 8 712 206 219 0 0 chr2L 16690809 16690850 -6320694 + (CATA)n Simple_repeat Simple_repeat 3 43 0 8 712 213 39 0 0 chr2L 16692919 16692945 -6318599 + (CGATG)n Simple_repeat Simple_repeat 3 28 0 8 712 28 71 0 0 chr2L 16697202 16697258 -6314286 + AT_rich Low_complexity Low_complexity 1 56 0 8 712 38 22 0 0 chr2L 16699931 16699976 -6311568 + AT_rich Low_complexity Low_complexity 1 45 0 8 712 21 57 0 0 chr2L 16700951 16700986 -6310558 + AT_rich Low_complexity Low_complexity 1 35 0 8 712 25 0 0 0 chr2L 16703391 16703416 -6308128 + AT_rich Low_complexity Low_complexity 1 25 0 8 712 27 29 0 0 chr2L 16707823 16707857 -6303687 + AT_rich Low_complexity Low_complexity 1 34 0 8 712 251 129 31 46 chr2L 16707876 16707941 -6303603 + A-rich Low_complexity Low_complexity 1 64 0 8 712 217 189 0 36 chr2L 16716559 16716614 -6294930 + CT-rich Low_complexity Low_complexity 1 53 0 8 712 226 202 144 31 chr2L 16717382 16717479 -6294065 + DNAREP1_DM LINE Penelope 1 108 -486 8 712 320 166 289 2 chr2L 16717550 16717672 -6293872 + DNAREP1_DM LINE Penelope 431 556 -38 8 712 23 0 0 0 chr2L 16718238 16718261 -6293283 + AT_rich Low_complexity Low_complexity 1 23 0 8 712 21 82 0 0 chr2L 16719017 16719066 -6292478 + AT_rich Low_complexity Low_complexity 1 49 0 8 712 26 50 0 0 chr2L 16721579 16721619 -6289925 + AT_rich Low_complexity Low_complexity 1 40 0 8 712 26 0 0 0 chr2L 16722547 16722573 -6288971 + AT_rich Low_complexity Low_complexity 1 26 0 8 712 232 222 0 0 chr2L 16722807 16722852 -6288692 - DNAREP1_DM LINE Penelope -544 50 6 8 712 23 54 0 0 chr2L 16727912 16727949 -6283595 + AT_rich Low_complexity Low_complexity 1 37 0 8 712 242 239 56 22 chr2L 16729696 16729786 -6281758 + MICROPIA_I LTR Gypsy 1881 1973 -2503 8 712 25 31 0 0 chr2L 16731073 16731105 -6280439 + AT_rich Low_complexity Low_complexity 1 32 0 8 712 21 0 0 0 chr2L 16731176 16731197 -6280347 + AT_rich Low_complexity Low_complexity 1 21 0 8 712 51 109 0 11 chr2L 16732195 16732482 -6279062 + AT_rich Low_complexity Low_complexity 1 284 0 8 712 62 68 0 0 chr2L 16732399 16732517 -6279027 + AT_rich Low_complexity Low_complexity 1 118 0 8 712 24 32 0 0 chr2L 16738539 16738570 -6272974 + AT_rich Low_complexity Low_complexity 1 31 0 8 712 208 139 0 0 chr2L 16739382 16739418 -6272126 + (A)n Simple_repeat Simple_repeat 1 36 0 8 712 21 0 0 0 chr2L 16742346 16742367 -6269177 + AT_rich Low_complexity Low_complexity 1 21 0 8 712 21 36 0 0 chr2L 16743329 16743357 -6268187 + AT_rich Low_complexity Low_complexity 1 28 0 8 712 24 0 0 0 chr2L 16745535 16745559 -6265985 + AT_rich Low_complexity Low_complexity 1 24 0 8 712 239 143 43 57 chr2L 16746358 16746499 -6265045 + (CAG)n Simple_repeat Simple_repeat 3 141 0 8 712 33 73 0 0 chr2L 16747006 16747074 -6264470 + AT_rich Low_complexity Low_complexity 1 68 0 8 712 245 98 24 0 chr2L 16747893 16747934 -6263610 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 8 712 189 74 0 0 chr2L 16748877 16748904 -6262640 + (A)n Simple_repeat Simple_repeat 1 27 0 8 712 37 81 0 0 chr2L 16751905 16751991 -6259553 + AT_rich Low_complexity Low_complexity 1 86 0 8 712 30 45 0 0 chr2L 16753160 16753204 -6258340 + AT_rich Low_complexity Low_complexity 1 44 0 8 712 24 53 0 0 chr2L 16753929 16753967 -6257577 + AT_rich Low_complexity Low_complexity 1 38 0 8 712 234 169 54 33 chr2L 16756768 16756860 -6254684 + (TATAA)n Simple_repeat Simple_repeat 4 97 0 8 712 22 0 0 0 chr2L 16760604 16760626 -6250918 + AT_rich Low_complexity Low_complexity 1 22 0 8 712 195 175 0 0 chr2L 16761323 16761380 -6250164 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 8 712 181 0 0 65 chr2L 16762676 16762707 -6248837 + (TTA)n Simple_repeat Simple_repeat 2 30 0 8 712 21 0 0 0 chr2L 16762860 16762881 -6248663 + AT_rich Low_complexity Low_complexity 1 21 0 8 712 47 53 0 0 chr2L 16762887 16762962 -6248582 + AT_rich Low_complexity Low_complexity 1 75 0 8 712 27 0 0 0 chr2L 16764250 16764277 -6247267 + AT_rich Low_complexity Low_complexity 1 27 0 8 712 27 29 0 0 chr2L 16764968 16765002 -6246542 + AT_rich Low_complexity Low_complexity 1 34 0 8 712 258 136 0 0 chr2L 16766807 16766851 -6244693 + (CAG)n Simple_repeat Simple_repeat 1 44 0 8 712 222 62 0 0 chr2L 16772793 16772825 -6238719 + (TC)n Simple_repeat Simple_repeat 2 33 0 8 712 203 85 41 41 chr2L 16773110 16773159 -6238385 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 712 249 57 0 0 chr2L 16773439 16773474 -6238070 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 713 209 83 0 27 chr2L 16781777 16781814 -6229730 + (CTCTG)n Simple_repeat Simple_repeat 3 38 0 8 713 183 129 0 0 chr2L 16784152 16784183 -6227361 + (TCTCTG)n Simple_repeat Simple_repeat 5 35 0 8 713 22 56 0 0 chr2L 16787191 16787227 -6224317 + AT_rich Low_complexity Low_complexity 1 36 0 8 713 43 85 0 0 chr2L 16788114 16788220 -6223324 + AT_rich Low_complexity Low_complexity 1 106 0 8 713 33 56 0 0 chr2L 16789911 16789965 -6221579 + AT_rich Low_complexity Low_complexity 1 54 0 8 713 26 0 0 0 chr2L 16793784 16793810 -6217734 + AT_rich Low_complexity Low_complexity 1 26 0 8 713 40 79 0 0 chr2L 16793892 16793981 -6217563 + AT_rich Low_complexity Low_complexity 1 89 0 8 713 23 92 0 0 chr2L 16796019 16796084 -6215460 + AT_rich Low_complexity Low_complexity 1 65 0 8 713 29 0 0 0 chr2L 16798351 16798380 -6213164 + AT_rich Low_complexity Low_complexity 1 29 0 8 713 21 0 0 0 chr2L 16798786 16798807 -6212737 + AT_rich Low_complexity Low_complexity 1 21 0 8 713 30 0 0 0 chr2L 16799401 16799431 -6212113 + AT_rich Low_complexity Low_complexity 1 30 0 8 713 25 75 0 0 chr2L 16801523 16801576 -6209968 + AT_rich Low_complexity Low_complexity 1 53 0 8 713 193 128 43 0 chr2L 16804242 16804289 -6207255 + (TTG)n Simple_repeat Simple_repeat 3 51 0 8 713 34 0 0 0 chr2L 16805362 16805396 -6206148 + AT_rich Low_complexity Low_complexity 1 34 0 8 713 21 0 0 0 chr2L 16806558 16806579 -6204965 + AT_rich Low_complexity Low_complexity 1 21 0 8 713 246 105 0 0 chr2L 16808783 16808821 -6202723 + (CTG)n Simple_repeat Simple_repeat 1 38 0 8 713 261 145 12 62 chr2L 16808927 16809008 -6202536 - ROO_I LTR Pao -7518 738 662 8 713 26 64 0 0 chr2L 16809576 16809623 -6201921 + AT_rich Low_complexity Low_complexity 1 47 0 8 713 204 196 0 38 chr2L 16810413 16810466 -6201078 + (CAA)n Simple_repeat Simple_repeat 1 51 0 8 713 180 77 0 0 chr2L 16812773 16812799 -6198745 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 8 713 255 114 0 0 chr2L 16813756 16813800 -6197744 + (CAG)n Simple_repeat Simple_repeat 1 44 0 8 713 192 40 0 0 chr2L 16815634 16815659 -6195885 + (GGA)n Simple_repeat Simple_repeat 2 26 0 8 713 192 40 0 0 chr2L 16817383 16817408 -6194136 + (A)n Simple_repeat Simple_repeat 1 25 0 8 713 21 0 0 0 chr2L 16819275 16819296 -6192248 + AT_rich Low_complexity Low_complexity 1 21 0 8 713 24 0 0 0 chr2L 16823589 16823613 -6187931 + AT_rich Low_complexity Low_complexity 1 24 0 8 713 21 0 0 0 chr2L 16825543 16825564 -6185980 + AT_rich Low_complexity Low_complexity 1 21 0 8 713 32 57 0 0 chr2L 16826942 16826995 -6184549 + AT_rich Low_complexity Low_complexity 1 53 0 8 713 22 80 0 0 chr2L 16827984 16828034 -6183510 + AT_rich Low_complexity Low_complexity 1 50 0 8 713 23 33 0 0 chr2L 16835219 16835249 -6176295 + AT_rich Low_complexity Low_complexity 1 30 0 8 713 21 0 0 0 chr2L 16838978 16838999 -6172545 + AT_rich Low_complexity Low_complexity 1 21 0 8 713 23 0 0 0 chr2L 16839185 16839208 -6172336 + AT_rich Low_complexity Low_complexity 1 23 0 8 713 24 32 0 0 chr2L 16839989 16840020 -6171524 + AT_rich Low_complexity Low_complexity 1 31 0 8 713 23 0 0 0 chr2L 16842196 16842219 -6169325 + AT_rich Low_complexity Low_complexity 1 23 0 8 713 331 229 218 46 chr2L 16842548 16842722 -6168822 + DNAREP1_DM LINE Penelope 1 204 -390 8 713 240 244 116 47 chr2L 16842740 16842826 -6168718 + DNAREP1_DM LINE Penelope 374 465 -129 8 713 293 93 0 0 chr2L 16842839 16842882 -6168662 + DNAREP1_DM LINE Penelope 551 593 -1 8 713 202 274 0 0 chr2L 16843137 16843210 -6168334 + T-rich Low_complexity Low_complexity 1 73 0 8 713 33 0 0 0 chr2L 16845013 16845046 -6166498 + AT_rich Low_complexity Low_complexity 1 33 0 8 713 31 0 0 0 chr2L 16845913 16845944 -6165600 + AT_rich Low_complexity Low_complexity 1 31 0 8 713 39 80 0 0 chr2L 16850281 16850369 -6161175 + AT_rich Low_complexity Low_complexity 1 88 0 8 713 31 44 0 0 chr2L 16850861 16850906 -6160638 + AT_rich Low_complexity Low_complexity 1 45 0 8 713 31 0 0 0 chr2L 16851306 16851337 -6160207 + AT_rich Low_complexity Low_complexity 1 31 0 8 713 24 32 0 0 chr2L 16851735 16851766 -6159778 + AT_rich Low_complexity Low_complexity 1 31 0 8 713 35 0 0 0 chr2L 16852569 16852604 -6158940 + AT_rich Low_complexity Low_complexity 1 35 0 8 713 33 0 0 0 chr2L 16852828 16852861 -6158683 + AT_rich Low_complexity Low_complexity 1 33 0 8 713 24 53 0 0 chr2L 16853010 16853048 -6158496 + AT_rich Low_complexity Low_complexity 1 38 0 8 713 425 295 81 21 chr2L 16854982 16855274 -6156270 + DOC LINE Jockey 2246 2521 -2171 8 713 463 325 32 26 chr2L 16855441 16855788 -6155756 + DOC4_DM LINE Jockey 2842 3190 -1550 8 713 4603 159 58 11 chr2L 16855807 16856954 -6154590 + DOC4_DM LINE Jockey 2081 2790 -1 8 713 345 105 0 50 chr2L 16857068 16857147 -6154397 + DOC4_DM LINE Jockey 4624 4690 -35 8 713 375 89 0 0 chr2L 16857940 16857996 -6153548 + (TTCTC)n Simple_repeat Simple_repeat 4 59 0 8 713 787 162 12 6 chr2L 16858765 16858926 -6152618 - HOBO DNA hAT 0 3016 2855 8 713 403 45 0 15 chr2L 16858928 16858996 -6152548 - HOBO DNA hAT -528 2488 2422 8 713 44 20 0 0 chr2L 16859011 16859062 -6152482 + AT_rich Low_complexity Low_complexity 1 51 0 8 713 26 30 0 0 chr2L 16859074 16859107 -6152437 + AT_rich Low_complexity Low_complexity 1 33 0 8 713 1300 192 49 42 chr2L 16859114 16859500 -6152044 - HOBO DNA hAT -2626 390 2 8 713 218 257 29 0 chr2L 16859586 16859656 -6151888 + (CTA)n Simple_repeat Simple_repeat 3 74 0 8 713 26 30 0 0 chr2L 16859888 16859921 -6151623 + AT_rich Low_complexity Low_complexity 1 33 0 8 713 185 47 93 0 chr2L 16867076 16867119 -6144425 + (TA)n Simple_repeat Simple_repeat 2 48 0 8 713 189 0 0 0 chr2L 16867575 16867596 -6143948 + (TTCC)n Simple_repeat Simple_repeat 3 23 0 8 713 312 83 0 0 chr2L 16869744 16869792 -6141752 + (GGA)n Simple_repeat Simple_repeat 1 48 0 8 713 207 0 0 0 chr2L 16872659 16872682 -6138862 + (CTG)n Simple_repeat Simple_repeat 2 24 0 8 713 21 57 0 0 chr2L 16874663 16874698 -6136846 + AT_rich Low_complexity Low_complexity 1 35 0 8 713 24 32 0 0 chr2L 16875877 16875908 -6135636 + AT_rich Low_complexity Low_complexity 1 31 0 8 713 24 0 0 0 chr2L 16875950 16875974 -6135570 + AT_rich Low_complexity Low_complexity 1 24 0 8 713 189 0 0 0 chr2L 16876870 16876891 -6134653 + (T)n Simple_repeat Simple_repeat 1 21 0 8 713 180 0 0 0 chr2L 16877709 16877729 -6133815 + (CA)n Simple_repeat Simple_repeat 1 20 0 8 713 22 70 0 0 chr2L 16886348 16886391 -6125153 + AT_rich Low_complexity Low_complexity 1 43 0 8 713 21 0 0 0 chr2L 16888779 16888800 -6122744 + AT_rich Low_complexity Low_complexity 1 21 0 8 713 210 219 0 0 chr2L 16888902 16888943 -6122601 + (CAG)n Simple_repeat Simple_repeat 2 42 0 8 713 29 28 0 0 chr2L 16895209 16895245 -6116299 + AT_rich Low_complexity Low_complexity 1 36 0 8 713 24 67 0 0 chr2L 16902342 16902387 -6109157 + AT_rich Low_complexity Low_complexity 1 45 0 8 713 34 65 0 0 chr2L 16902428 16902490 -6109054 + AT_rich Low_complexity Low_complexity 1 62 0 8 714 183 80 0 0 chr2L 16913967 16913992 -6097552 + (CAG)n Simple_repeat Simple_repeat 3 27 0 8 714 21 0 0 0 chr2L 16916958 16916979 -6094565 + AT_rich Low_complexity Low_complexity 1 21 0 8 714 207 204 0 0 chr2L 16917277 16917321 -6094223 + T-rich Low_complexity Low_complexity 1 44 0 8 714 23 33 0 0 chr2L 16919807 16919837 -6091707 + AT_rich Low_complexity Low_complexity 1 30 0 8 714 26 0 0 0 chr2L 16920700 16920726 -6090818 + AT_rich Low_complexity Low_complexity 1 26 0 8 714 186 133 0 0 chr2L 16924067 16924097 -6087447 + (TA)n Simple_repeat Simple_repeat 2 31 0 8 714 27 62 0 0 chr2L 16925380 16925428 -6086116 + AT_rich Low_complexity Low_complexity 1 48 0 8 714 28 0 0 0 chr2L 16926035 16926063 -6085481 + AT_rich Low_complexity Low_complexity 1 28 0 8 714 24 0 0 0 chr2L 16927189 16927213 -6084331 + AT_rich Low_complexity Low_complexity 1 24 0 8 714 235 304 0 0 chr2L 16929077 16929146 -6082398 + (CTG)n Simple_repeat Simple_repeat 2 70 0 8 714 224 139 23 0 chr2L 16929365 16929408 -6082136 + (CAG)n Simple_repeat Simple_repeat 2 45 0 8 714 27 49 0 0 chr2L 16930554 16930595 -6080949 + AT_rich Low_complexity Low_complexity 1 41 0 8 714 217 234 0 0 chr2L 16932332 16932379 -6079165 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 714 27 0 0 0 chr2L 16937122 16937149 -6074395 + AT_rich Low_complexity Low_complexity 1 27 0 8 714 297 0 0 0 chr2L 16940036 16940069 -6071475 + (CTCCG)n Simple_repeat Simple_repeat 2 34 0 8 714 21 0 0 0 chr2L 16942298 16942319 -6069225 + AT_rich Low_complexity Low_complexity 1 21 0 8 714 24 0 0 0 chr2L 16942566 16942590 -6068954 + AT_rich Low_complexity Low_complexity 1 24 0 8 714 21 36 0 0 chr2L 16944110 16944138 -6067406 + AT_rich Low_complexity Low_complexity 1 28 0 8 714 276 221 14 14 chr2L 16946224 16946293 -6065251 + (TG)n Simple_repeat Simple_repeat 1 69 0 8 714 21 0 0 0 chr2L 16946528 16946549 -6064995 + AT_rich Low_complexity Low_complexity 1 21 0 8 714 25 51 0 0 chr2L 16949094 16949133 -6062411 + AT_rich Low_complexity Low_complexity 1 39 0 8 714 203 175 0 0 chr2L 16950249 16950289 -6061255 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 714 249 33 0 0 chr2L 16954859 16954889 -6056655 + (TA)n Simple_repeat Simple_repeat 2 31 0 8 714 27 29 0 0 chr2L 16955349 16955383 -6056161 + AT_rich Low_complexity Low_complexity 1 34 0 8 714 235 213 0 0 chr2L 16956727 16956774 -6054770 + (CTG)n Simple_repeat Simple_repeat 1 47 0 8 714 40708 3 0 0 chr2L 16958165 16962888 -6048656 + DOC LINE Jockey 3 4725 0 8 714 29 28 0 0 chr2L 16966209 16966245 -6045299 + AT_rich Low_complexity Low_complexity 1 36 0 8 714 216 111 0 0 chr2L 16968975 16969011 -6042533 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 714 202 277 0 0 chr2L 16972236 16972301 -6039243 + CT-rich Low_complexity Low_complexity 3 67 0 8 714 28 0 0 0 chr2L 16974856 16974884 -6036660 + AT_rich Low_complexity Low_complexity 1 28 0 8 714 183 42 0 0 chr2L 16975051 16975075 -6036469 + (CAGT)n Simple_repeat Simple_repeat 1 24 0 8 714 31 0 0 0 chr2L 16977742 16977773 -6033771 + AT_rich Low_complexity Low_complexity 1 31 0 8 714 219 69 0 0 chr2L 16979455 16979484 -6032060 + (AGCTG)n Simple_repeat Simple_repeat 5 33 0 8 714 21 0 0 0 chr2L 16982501 16982522 -6029022 + AT_rich Low_complexity Low_complexity 1 21 0 8 714 180 226 0 0 chr2L 16985386 16985448 -6026096 + (ATG)n Simple_repeat Simple_repeat 3 64 0 8 714 26 30 0 0 chr2L 16985684 16985717 -6025827 + AT_rich Low_complexity Low_complexity 1 33 0 8 714 221 128 21 0 chr2L 16986713 16986760 -6024784 + (TC)n Simple_repeat Simple_repeat 1 48 0 8 714 210 163 23 0 chr2L 16987589 16987632 -6023912 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 8 714 26 50 0 0 chr2L 16988107 16988147 -6023397 + AT_rich Low_complexity Low_complexity 1 40 0 8 714 25 0 0 0 chr2L 16991145 16991170 -6020374 + AT_rich Low_complexity Low_complexity 1 25 0 8 714 240 250 112 0 chr2L 16991336 16991416 -6020128 - PENELOPE LINE Penelope -169 3992 3904 8 714 26 30 0 0 chr2L 16992275 16992308 -6019236 + AT_rich Low_complexity Low_complexity 1 33 0 8 714 222 136 0 0 chr2L 16992685 16992729 -6018815 + (CAG)n Simple_repeat Simple_repeat 3 46 0 8 714 309 276 0 0 chr2L 16992910 16992997 -6018547 + (CAG)n Simple_repeat Simple_repeat 2 88 0 8 714 22 35 0 0 chr2L 16993623 16993652 -6017892 + AT_rich Low_complexity Low_complexity 1 29 0 8 714 24 32 0 0 chr2L 16994156 16994187 -6017357 + AT_rich Low_complexity Low_complexity 1 31 0 8 714 218 200 16 32 chr2L 16995780 16995842 -6015702 + (CAGAGA)n Simple_repeat Simple_repeat 2 62 0 8 714 26 0 0 0 chr2L 16996116 16996142 -6015402 + AT_rich Low_complexity Low_complexity 1 26 0 8 714 213 228 18 0 chr2L 16996658 16996715 -6014829 + (ACTG)n Simple_repeat Simple_repeat 2 59 0 8 714 22 35 0 0 chr2L 16998199 16998228 -6013316 + AT_rich Low_complexity Low_complexity 1 29 0 8 714 24 53 0 0 chr2L 17000740 17000778 -6010766 + AT_rich Low_complexity Low_complexity 1 38 0 8 714 24 32 0 0 chr2L 17002195 17002226 -6009318 + AT_rich Low_complexity Low_complexity 1 31 0 8 714 22 0 0 0 chr2L 17002308 17002330 -6009214 + AT_rich Low_complexity Low_complexity 1 22 0 8 714 21 0 0 0 chr2L 17003734 17003755 -6007789 + AT_rich Low_complexity Low_complexity 1 21 0 8 714 27 29 0 0 chr2L 17004305 17004339 -6007205 + AT_rich Low_complexity Low_complexity 1 34 0 8 714 202 185 37 0 chr2L 17004767 17004821 -6006723 + (TA)n Simple_repeat Simple_repeat 2 57 0 8 714 38 39 0 0 chr2L 17006146 17006198 -6005346 + AT_rich Low_complexity Low_complexity 1 52 0 8 714 23 33 0 0 chr2L 17006886 17006916 -6004628 + AT_rich Low_complexity Low_complexity 1 30 0 8 714 210 128 0 0 chr2L 17008801 17008840 -6002704 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 714 210 37 0 0 chr2L 17010145 17010172 -6001372 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 714 223 192 0 37 chr2L 17013678 17013732 -5997812 + (CATCC)n Simple_repeat Simple_repeat 5 56 0 8 714 24 67 0 0 chr2L 17016792 17016837 -5994707 + AT_rich Low_complexity Low_complexity 1 45 0 8 714 230 214 0 0 chr2L 17017981 17018023 -5993521 + (TCG)n Simple_repeat Simple_repeat 3 44 0 8 714 276 30 0 0 chr2L 17020697 17020730 -5990814 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 714 189 74 0 0 chr2L 17020733 17020760 -5990784 + (CAG)n Simple_repeat Simple_repeat 3 29 0 8 714 205 186 0 0 chr2L 17022368 17022411 -5989133 + (TTG)n Simple_repeat Simple_repeat 1 43 0 8 714 34 0 0 0 chr2L 17023879 17023913 -5987631 + AT_rich Low_complexity Low_complexity 1 34 0 8 714 22 35 0 0 chr2L 17029641 17029670 -5981874 + AT_rich Low_complexity Low_complexity 1 29 0 8 714 23 92 0 0 chr2L 17034470 17034535 -5977009 + AT_rich Low_complexity Low_complexity 1 65 0 8 714 35 0 0 0 chr2L 17038430 17038465 -5973079 + AT_rich Low_complexity Low_complexity 1 35 0 8 714 23 33 0 0 chr2L 17039125 17039155 -5972389 + AT_rich Low_complexity Low_complexity 1 30 0 8 715 21 36 0 0 chr2L 17039920 17039948 -5971596 + AT_rich Low_complexity Low_complexity 1 28 0 8 715 203 114 0 22 chr2L 17041444 17041489 -5970055 + (CGAAA)n Simple_repeat Simple_repeat 2 45 0 8 715 186 43 0 0 chr2L 17041933 17041956 -5969588 + (TCCG)n Simple_repeat Simple_repeat 3 25 0 8 715 40 0 0 0 chr2L 17042440 17042480 -5969064 + AT_rich Low_complexity Low_complexity 1 40 0 8 715 184 185 0 36 chr2L 17044455 17044511 -5967033 + (CAA)n Simple_repeat Simple_repeat 1 54 0 8 715 21 36 0 0 chr2L 17044962 17044990 -5966554 + AT_rich Low_complexity Low_complexity 1 28 0 8 715 22 70 0 0 chr2L 17045472 17045515 -5966029 + AT_rich Low_complexity Low_complexity 1 43 0 8 715 213 94 0 0 chr2L 17049777 17049809 -5961735 + (TTATA)n Simple_repeat Simple_repeat 2 33 0 8 715 186 191 0 0 chr2L 17049966 17050008 -5961536 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 715 211 205 0 0 chr2L 17050231 17050270 -5961274 + (ACTG)n Simple_repeat Simple_repeat 3 41 0 8 715 24 0 0 0 chr2L 17051661 17051685 -5959859 + AT_rich Low_complexity Low_complexity 1 24 0 8 715 208 167 20 40 chr2L 17051803 17051853 -5959691 + (CAAA)n Simple_repeat Simple_repeat 1 49 0 8 715 29 0 0 0 chr2L 17052355 17052384 -5959160 + AT_rich Low_complexity Low_complexity 1 29 0 8 715 23 0 0 0 chr2L 17054119 17054142 -5957402 + AT_rich Low_complexity Low_complexity 1 23 0 8 715 22 0 0 0 chr2L 17056393 17056415 -5955129 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 33 25 0 0 chr2L 17056898 17056938 -5954606 + AT_rich Low_complexity Low_complexity 1 40 0 8 715 31 82 0 0 chr2L 17057426 17057499 -5954045 + AT_rich Low_complexity Low_complexity 1 73 0 8 715 192 40 0 0 chr2L 17060023 17060048 -5951496 + (A)n Simple_repeat Simple_repeat 1 25 0 8 715 23 0 0 0 chr2L 17060774 17060797 -5950747 + AT_rich Low_complexity Low_complexity 1 23 0 8 715 189 0 0 0 chr2L 17060990 17061011 -5950533 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 715 21 0 0 0 chr2L 17062720 17062741 -5948803 + AT_rich Low_complexity Low_complexity 1 21 0 8 715 43 64 0 0 chr2L 17063587 17063665 -5947879 + AT_rich Low_complexity Low_complexity 1 78 0 8 715 38 51 0 0 chr2L 17065482 17065541 -5946003 + AT_rich Low_complexity Low_complexity 1 59 0 8 715 22 0 0 0 chr2L 17066102 17066124 -5945420 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 30 27 0 0 chr2L 17069365 17069402 -5942142 + AT_rich Low_complexity Low_complexity 1 37 0 8 715 201 184 25 50 chr2L 17070210 17070290 -5941254 + (TTATA)n Simple_repeat Simple_repeat 2 79 0 8 715 23 33 0 0 chr2L 17071036 17071066 -5940478 + AT_rich Low_complexity Low_complexity 1 30 0 8 715 22 0 0 0 chr2L 17072974 17072996 -5938548 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 25 102 0 0 chr2L 17074863 17074951 -5936593 + AT_rich Low_complexity Low_complexity 1 88 0 8 715 22 35 0 0 chr2L 17077293 17077322 -5934222 + AT_rich Low_complexity Low_complexity 1 29 0 8 715 21 57 0 0 chr2L 17077848 17077883 -5933661 + AT_rich Low_complexity Low_complexity 1 35 0 8 715 46 0 0 0 chr2L 17078481 17078527 -5933017 + AT_rich Low_complexity Low_complexity 1 46 0 8 715 203 259 0 0 chr2L 17081301 17081355 -5930189 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 715 213 154 0 0 chr2L 17085881 17085920 -5925624 + (CGAAA)n Simple_repeat Simple_repeat 3 41 0 8 715 22 0 0 0 chr2L 17089174 17089196 -5922348 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 23 33 0 0 chr2L 17090966 17090996 -5920548 + AT_rich Low_complexity Low_complexity 1 30 0 8 715 183 42 0 0 chr2L 17091040 17091064 -5920480 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 8 715 23 0 0 0 chr2L 17092379 17092402 -5919142 + AT_rich Low_complexity Low_complexity 1 23 0 8 715 22 0 0 0 chr2L 17092492 17092514 -5919030 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 288 77 0 0 chr2L 17092616 17092655 -5918889 + (CTG)n Simple_repeat Simple_repeat 2 40 0 8 715 29 0 0 0 chr2L 17096197 17096226 -5915318 + AT_rich Low_complexity Low_complexity 1 29 0 8 715 23 0 0 0 chr2L 17097112 17097135 -5914409 + AT_rich Low_complexity Low_complexity 1 23 0 8 715 220 189 35 43 chr2L 17097165 17097281 -5914263 + (TTATA)n Simple_repeat Simple_repeat 5 119 0 8 715 207 0 0 0 chr2L 17097986 17098009 -5913535 + (A)n Simple_repeat Simple_repeat 1 23 0 8 715 35 24 0 0 chr2L 17101936 17101978 -5909566 + AT_rich Low_complexity Low_complexity 1 42 0 8 715 28 61 0 0 chr2L 17102154 17102203 -5909341 + AT_rich Low_complexity Low_complexity 1 49 0 8 715 33 0 0 0 chr2L 17102286 17102319 -5909225 + AT_rich Low_complexity Low_complexity 1 33 0 8 715 204 111 0 0 chr2L 17103276 17103312 -5908232 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 715 27 49 0 0 chr2L 17103952 17103993 -5907551 + AT_rich Low_complexity Low_complexity 1 41 0 8 715 27 0 0 0 chr2L 17107747 17107774 -5903770 + AT_rich Low_complexity Low_complexity 1 27 0 8 715 22 0 0 0 chr2L 17108369 17108391 -5903153 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 24 0 0 0 chr2L 17109279 17109303 -5902241 + AT_rich Low_complexity Low_complexity 1 24 0 8 715 22 0 0 0 chr2L 17111047 17111069 -5900475 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 33 25 0 0 chr2L 17115653 17115693 -5895851 + AT_rich Low_complexity Low_complexity 1 40 0 8 715 32 43 0 0 chr2L 17117116 17117162 -5894382 + AT_rich Low_complexity Low_complexity 1 46 0 8 715 251 222 16 0 chr2L 17119199 17119262 -5892282 + (TCCA)n Simple_repeat Simple_repeat 4 67 0 8 715 213 209 0 0 chr2L 17126256 17126299 -5885245 + (CTG)n Simple_repeat Simple_repeat 3 45 0 8 715 23 54 0 0 chr2L 17132014 17132051 -5879493 + AT_rich Low_complexity Low_complexity 1 37 0 8 715 198 118 0 0 chr2L 17135479 17135513 -5876031 + (T)n Simple_repeat Simple_repeat 1 34 0 8 715 204 206 0 0 chr2L 17137222 17137256 -5874288 + (TTCGG)n Simple_repeat Simple_repeat 2 35 0 8 715 34 55 0 0 chr2L 17137705 17137760 -5873784 + AT_rich Low_complexity Low_complexity 1 55 0 8 715 24 53 0 0 chr2L 17137822 17137860 -5873684 + AT_rich Low_complexity Low_complexity 1 38 0 8 715 28 29 0 0 chr2L 17138640 17138675 -5872869 + AT_rich Low_complexity Low_complexity 1 35 0 8 715 25 51 0 0 chr2L 17139455 17139494 -5872050 + AT_rich Low_complexity Low_complexity 1 39 0 8 715 25 0 0 0 chr2L 17140450 17140475 -5871069 + AT_rich Low_complexity Low_complexity 1 25 0 8 715 23 0 0 0 chr2L 17141625 17141648 -5869896 + AT_rich Low_complexity Low_complexity 1 23 0 8 715 22 0 0 0 chr2L 17141748 17141770 -5869774 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 4527 0 0 0 chr2L 17144384 17144902 -5866642 - NOMAD_LTR LTR Gypsy 0 518 1 8 715 57605 0 1 1 chr2L 17144902 17151477 -5860067 - NOMAD_I LTR Gypsy 0 6572 1 8 715 4527 0 0 0 chr2L 17151477 17151995 -5859549 - NOMAD_LTR LTR Gypsy 0 518 1 8 715 21 0 0 0 chr2L 17155790 17155811 -5855733 + AT_rich Low_complexity Low_complexity 1 21 0 8 715 21 57 0 0 chr2L 17155870 17155905 -5855639 + AT_rich Low_complexity Low_complexity 1 35 0 8 715 22 0 0 0 chr2L 17157108 17157130 -5854414 + AT_rich Low_complexity Low_complexity 1 22 0 8 715 26 0 0 0 chr2L 17157929 17157955 -5853589 + AT_rich Low_complexity Low_complexity 1 26 0 8 715 180 0 0 0 chr2L 17158909 17158929 -5852615 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 8 715 25 0 0 0 chr2L 17159146 17159171 -5852373 + AT_rich Low_complexity Low_complexity 1 25 0 8 715 26 0 0 0 chr2L 17162795 17162821 -5848723 + AT_rich Low_complexity Low_complexity 1 26 0 8 715 1606 0 0 0 chr2L 17167617 17167803 -5843741 + POGON1 DNA Pogo 1 186 0 8 716 21 0 0 0 chr2L 17175268 17175289 -5836255 + AT_rich Low_complexity Low_complexity 1 21 0 8 716 388 66 13 38 chr2L 17175292 17175371 -5836173 + DNAREP1_DM LINE Penelope 198 274 -320 8 716 33 43 0 0 chr2L 17175371 17175418 -5836126 + AT_rich Low_complexity Low_complexity 1 47 0 8 716 21 0 0 0 chr2L 17176417 17176438 -5835106 + AT_rich Low_complexity Low_complexity 1 21 0 8 716 30 45 0 0 chr2L 17177910 17177954 -5833590 + AT_rich Low_complexity Low_complexity 1 44 0 8 716 416 201 31 120 chr2L 17177974 17178166 -5833378 + DNAREP1_DM LINE Penelope 46 220 -374 8 716 332 214 154 10 chr2L 17178249 17178314 -5833230 + DNAREP1_DM LINE Penelope 366 444 -150 8 716 201 39 0 0 chr2L 17178314 17178340 -5833204 + (CGGA)n Simple_repeat Simple_repeat 4 29 0 8 716 332 214 154 10 chr2L 17178340 17178378 -5833166 + DNAREP1_DM LINE Penelope 445 484 -110 8 716 586 215 24 18 chr2L 17182621 17182787 -5828757 - DNAREP1_DM LINE Penelope 0 594 428 8 716 288 241 25 15 chr2L 17182782 17182896 -5828648 - DNAREP1_DM LINE Penelope -149 445 376 8 716 21 0 0 0 chr2L 17182942 17182963 -5828581 + AT_rich Low_complexity Low_complexity 1 21 0 8 716 21 36 0 0 chr2L 17185509 17185537 -5826007 + AT_rich Low_complexity Low_complexity 1 28 0 8 716 321 100 0 0 chr2L 17188538 17188588 -5822956 + (CATTT)n Simple_repeat Simple_repeat 1 50 0 8 716 22 35 0 0 chr2L 17188936 17188965 -5822579 + AT_rich Low_complexity Low_complexity 1 29 0 8 716 203 267 0 0 chr2L 17189786 17189846 -5821698 + T-rich Low_complexity Low_complexity 1 60 0 8 716 28 29 0 0 chr2L 17190651 17190686 -5820858 + AT_rich Low_complexity Low_complexity 1 35 0 8 716 25 51 0 0 chr2L 17192319 17192358 -5819186 + AT_rich Low_complexity Low_complexity 1 39 0 8 716 21 0 0 0 chr2L 17193040 17193061 -5818483 + AT_rich Low_complexity Low_complexity 1 21 0 8 716 29 28 0 0 chr2L 17193839 17193875 -5817669 + AT_rich Low_complexity Low_complexity 1 36 0 8 716 4353 0 0 10 chr2L 17199216 17199720 -5811824 - HOBO DNA hAT 0 3016 2518 8 716 7959 1 0 0 chr2L 17199718 17200622 -5810922 - HOBO DNA hAT -2112 904 1 8 716 27 29 0 0 chr2L 17200740 17200774 -5810770 + AT_rich Low_complexity Low_complexity 1 34 0 8 716 24 0 0 0 chr2L 17203451 17203475 -5808069 + AT_rich Low_complexity Low_complexity 1 24 0 8 716 180 182 0 0 chr2L 17205962 17206006 -5805538 + (ATG)n Simple_repeat Simple_repeat 1 44 0 8 716 21 71 0 0 chr2L 17209777 17209819 -5801725 + AT_rich Low_complexity Low_complexity 1 42 0 8 716 30 0 0 0 chr2L 17210937 17210967 -5800577 + AT_rich Low_complexity Low_complexity 1 30 0 8 716 22 0 0 0 chr2L 17211603 17211625 -5799919 + AT_rich Low_complexity Low_complexity 1 22 0 8 716 28 48 0 0 chr2L 17213000 17213042 -5798502 + AT_rich Low_complexity Low_complexity 1 42 0 8 716 285 29 0 0 chr2L 17215813 17215847 -5795697 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 716 180 125 0 0 chr2L 17217268 17217300 -5794244 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 716 36 0 0 0 chr2L 17226175 17226211 -5785333 + AT_rich Low_complexity Low_complexity 1 36 0 8 716 21 57 0 0 chr2L 17227546 17227581 -5783963 + AT_rich Low_complexity Low_complexity 1 35 0 8 716 212 175 0 0 chr2L 17229074 17229114 -5782430 + T-rich Low_complexity Low_complexity 1 40 0 8 716 225 65 0 0 chr2L 17229247 17229278 -5782266 + (GAAAA)n Simple_repeat Simple_repeat 1 31 0 8 716 21 0 0 0 chr2L 17230158 17230179 -5781365 + AT_rich Low_complexity Low_complexity 1 21 0 8 716 21 0 0 0 chr2L 17230331 17230352 -5781192 + AT_rich Low_complexity Low_complexity 1 21 0 8 716 22 0 0 0 chr2L 17241524 17241546 -5769998 + AT_rich Low_complexity Low_complexity 1 22 0 8 716 210 91 0 0 chr2L 17241757 17241790 -5769754 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 8 716 27 0 0 0 chr2L 17243612 17243639 -5767905 + AT_rich Low_complexity Low_complexity 1 27 0 8 716 234 0 0 0 chr2L 17244911 17244937 -5766607 + (T)n Simple_repeat Simple_repeat 1 26 0 8 716 221 181 11 98 chr2L 17245778 17245870 -5765674 + T-rich Low_complexity Low_complexity 1 84 0 8 716 255 79 0 0 chr2L 17249529 17249567 -5761977 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 716 26 50 0 0 chr2L 17250633 17250673 -5760871 + AT_rich Low_complexity Low_complexity 1 40 0 8 716 21 36 0 0 chr2L 17252680 17252708 -5758836 + AT_rich Low_complexity Low_complexity 1 28 0 8 716 221 128 43 0 chr2L 17254577 17254624 -5756920 + (TA)n Simple_repeat Simple_repeat 2 50 0 8 716 24 0 0 0 chr2L 17256083 17256107 -5755437 + AT_rich Low_complexity Low_complexity 1 24 0 8 716 22 35 0 0 chr2L 17261037 17261066 -5750478 + AT_rich Low_complexity Low_complexity 1 29 0 8 716 33 0 0 0 chr2L 17262040 17262073 -5749471 + AT_rich Low_complexity Low_complexity 1 33 0 8 716 201 154 0 0 chr2L 17266318 17266357 -5745187 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 716 35 41 0 0 chr2L 17267267 17267316 -5744228 + AT_rich Low_complexity Low_complexity 1 49 0 8 716 23 0 0 0 chr2L 17270157 17270180 -5741364 + AT_rich Low_complexity Low_complexity 1 23 0 8 716 24 77 0 0 chr2L 17270195 17270247 -5741297 + AT_rich Low_complexity Low_complexity 1 52 0 8 716 28 91 0 0 chr2L 17272874 17272951 -5738593 + AT_rich Low_complexity Low_complexity 1 77 0 8 716 40542 1 0 0 chr2L 17273264 17277956 -5733588 - FW_DM LINE Jockey 0 4692 1 8 716 23 54 0 0 chr2L 17279404 17279441 -5732103 + AT_rich Low_complexity Low_complexity 1 37 0 8 716 23 0 0 0 chr2L 17281692 17281715 -5729829 + AT_rich Low_complexity Low_complexity 1 23 0 8 716 21 0 0 0 chr2L 17281727 17281748 -5729796 + AT_rich Low_complexity Low_complexity 1 21 0 8 716 23 68 0 0 chr2L 17281805 17281849 -5729695 + AT_rich Low_complexity Low_complexity 1 44 0 8 716 306 50 0 0 chr2L 17282228 17282268 -5729276 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 716 420 210 189 26 chr2L 17282689 17282859 -5728685 - DNAREP1_DM LINE Penelope -1 593 429 8 716 252 188 0 0 chr2L 17285916 17285964 -5725580 + DNAREP1_DM LINE Penelope 440 487 -107 8 716 271 228 44 66 chr2L 17286727 17286910 -5724634 + (GAATG)n Simple_repeat Simple_repeat 1 179 0 8 716 407 340 10 7 chr2L 17286845 17287152 -5724392 + (GGATG)n Simple_repeat Simple_repeat 1 308 0 8 716 21 36 0 0 chr2L 17288512 17288540 -5723004 + AT_rich Low_complexity Low_complexity 1 28 0 8 716 29 0 0 0 chr2L 17292309 17292338 -5719206 + AT_rich Low_complexity Low_complexity 1 29 0 8 716 35 0 0 0 chr2L 17293406 17293441 -5718103 + AT_rich Low_complexity Low_complexity 1 35 0 8 716 27 0 0 0 chr2L 17294844 17294871 -5716673 + AT_rich Low_complexity Low_complexity 1 27 0 8 716 198 0 0 0 chr2L 17295090 17295112 -5716432 + (TA)n Simple_repeat Simple_repeat 2 23 0 8 716 215 154 0 55 chr2L 17296406 17296461 -5715083 + (CAAA)n Simple_repeat Simple_repeat 3 54 0 8 716 25 0 0 0 chr2L 17296914 17296939 -5714605 + AT_rich Low_complexity Low_complexity 1 25 0 8 716 21 36 0 0 chr2L 17300151 17300179 -5711365 + AT_rich Low_complexity Low_complexity 1 28 0 8 717 30 27 0 0 chr2L 17304266 17304303 -5707241 + AT_rich Low_complexity Low_complexity 1 37 0 8 717 26 0 0 0 chr2L 17306009 17306035 -5705509 + AT_rich Low_complexity Low_complexity 1 26 0 8 717 27 81 0 0 chr2L 17307725 17307787 -5703757 + AT_rich Low_complexity Low_complexity 1 62 0 8 717 21 0 0 0 chr2L 17309426 17309447 -5702097 + AT_rich Low_complexity Low_complexity 1 21 0 8 717 24 77 0 0 chr2L 17310600 17310652 -5700892 + AT_rich Low_complexity Low_complexity 1 52 0 8 717 225 119 0 0 chr2L 17310829 17310871 -5700673 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 717 28 71 0 0 chr2L 17318145 17318201 -5693343 + AT_rich Low_complexity Low_complexity 1 56 0 8 717 29 47 0 0 chr2L 17318879 17318922 -5692622 + AT_rich Low_complexity Low_complexity 1 43 0 8 717 333 280 0 20 chr2L 17320396 17320498 -5691046 + (TTG)n Simple_repeat Simple_repeat 1 100 0 8 717 210 71 0 0 chr2L 17327151 17327179 -5684365 + (CAA)n Simple_repeat Simple_repeat 3 30 0 8 717 24 0 0 0 chr2L 17328450 17328474 -5683070 + AT_rich Low_complexity Low_complexity 1 24 0 8 717 24 0 0 0 chr2L 17330459 17330483 -5681061 + AT_rich Low_complexity Low_complexity 1 24 0 8 717 24 0 0 0 chr2L 17331510 17331534 -5680010 + AT_rich Low_complexity Low_complexity 1 24 0 8 717 260 271 0 34 chr2L 17331823 17331911 -5679633 + (CTG)n Simple_repeat Simple_repeat 1 85 0 8 717 25 31 0 0 chr2L 17332154 17332186 -5679358 + AT_rich Low_complexity Low_complexity 1 32 0 8 717 26 64 0 0 chr2L 17332945 17332992 -5678552 + AT_rich Low_complexity Low_complexity 1 47 0 8 717 23 0 0 0 chr2L 17334610 17334633 -5676911 + AT_rich Low_complexity Low_complexity 1 23 0 8 717 9244 29 0 1 chr2L 17335602 17336708 -5674836 - PROTOP_A DNA P 0 1105 1 8 717 222 216 0 0 chr2L 17338097 17338148 -5673396 + (ATG)n Simple_repeat Simple_repeat 1 51 0 8 717 25 51 0 0 chr2L 17338455 17338494 -5673050 + AT_rich Low_complexity Low_complexity 1 39 0 8 717 23 33 0 0 chr2L 17338519 17338549 -5672995 + AT_rich Low_complexity Low_complexity 1 30 0 8 717 31 44 0 0 chr2L 17340197 17340242 -5671302 + AT_rich Low_complexity Low_complexity 1 45 0 8 717 220 279 16 0 chr2L 17340298 17340359 -5671185 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 717 21 0 0 0 chr2L 17342123 17342144 -5669400 + AT_rich Low_complexity Low_complexity 1 21 0 8 717 35 24 0 0 chr2L 17343300 17343342 -5668202 + AT_rich Low_complexity Low_complexity 1 42 0 8 717 21 57 0 0 chr2L 17343385 17343420 -5668124 + AT_rich Low_complexity Low_complexity 1 35 0 8 717 183 42 0 0 chr2L 17343636 17343660 -5667884 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 717 28 0 0 0 chr2L 17344095 17344123 -5667421 + AT_rich Low_complexity Low_complexity 1 28 0 8 717 22 0 0 0 chr2L 17344946 17344968 -5666576 + AT_rich Low_complexity Low_complexity 1 22 0 8 717 22 0 0 0 chr2L 17345950 17345972 -5665572 + AT_rich Low_complexity Low_complexity 1 22 0 8 717 240 111 0 0 chr2L 17346037 17346073 -5665471 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 8 717 23 0 0 0 chr2L 17347876 17347899 -5663645 + AT_rich Low_complexity Low_complexity 1 23 0 8 717 29 0 0 0 chr2L 17347965 17347994 -5663550 + AT_rich Low_complexity Low_complexity 1 29 0 8 717 23 33 0 0 chr2L 17350089 17350119 -5661425 + AT_rich Low_complexity Low_complexity 1 30 0 8 717 24 32 0 0 chr2L 17352026 17352057 -5659487 + AT_rich Low_complexity Low_complexity 1 31 0 8 717 22 0 0 0 chr2L 17352838 17352860 -5658684 + AT_rich Low_complexity Low_complexity 1 22 0 8 717 22 0 0 0 chr2L 17353585 17353607 -5657937 + AT_rich Low_complexity Low_complexity 1 22 0 8 717 26 0 0 0 chr2L 17355122 17355148 -5656396 + AT_rich Low_complexity Low_complexity 1 26 0 8 717 24 0 0 0 chr2L 17356671 17356695 -5654849 + AT_rich Low_complexity Low_complexity 1 24 0 8 717 44 0 0 0 chr2L 17356718 17356762 -5654782 + AT_rich Low_complexity Low_complexity 1 44 0 8 717 523 75 0 0 chr2L 17361745 17361812 -5649732 + DNAREP1_DM LINE Penelope 4 70 -524 8 717 340 100 0 32 chr2L 17361856 17361918 -5649626 + DNAREP1_DM LINE Penelope 165 224 -370 8 717 527 140 140 0 chr2L 17361906 17361950 -5649594 + DNAREP1_DM LINE Penelope 446 489 -105 8 717 705 84 25 0 chr2L 17361950 17362069 -5649475 + (TA)n Simple_repeat Simple_repeat 1 122 0 8 717 527 140 140 0 chr2L 17362069 17362124 -5649420 + DNAREP1_DM LINE Penelope 490 558 -36 8 717 192 77 0 0 chr2L 17363226 17363252 -5648292 + (CATATA)n Simple_repeat Simple_repeat 6 31 0 8 717 189 74 0 0 chr2L 17364982 17365009 -5646535 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 717 37 23 0 0 chr2L 17365194 17365238 -5646306 + AT_rich Low_complexity Low_complexity 1 44 0 8 717 23 0 0 0 chr2L 17367111 17367134 -5644410 + AT_rich Low_complexity Low_complexity 1 23 0 8 717 27 29 0 0 chr2L 17370232 17370266 -5641278 + AT_rich Low_complexity Low_complexity 1 34 0 8 717 220 246 0 44 chr2L 17371643 17371711 -5639833 + (CTG)n Simple_repeat Simple_repeat 3 67 0 8 717 180 135 0 0 chr2L 17371879 17371916 -5639628 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 717 26 30 0 0 chr2L 17372439 17372472 -5639072 + AT_rich Low_complexity Low_complexity 1 33 0 8 717 198 118 0 0 chr2L 17376145 17376179 -5635365 + (ACTG)n Simple_repeat Simple_repeat 1 34 0 8 717 223 279 0 0 chr2L 17379369 17379430 -5632114 + (TA)n Simple_repeat Simple_repeat 1 61 0 8 717 30 0 0 0 chr2L 17380389 17380419 -5631125 + AT_rich Low_complexity Low_complexity 1 30 0 8 717 269 162 53 13 chr2L 17380836 17380911 -5630633 - ROO_I LTR Pao -7531 725 648 8 717 25 31 0 0 chr2L 17388779 17388811 -5622733 + AT_rich Low_complexity Low_complexity 1 32 0 8 717 24 32 0 0 chr2L 17394315 17394346 -5617198 + AT_rich Low_complexity Low_complexity 1 31 0 8 717 21 57 0 0 chr2L 17394751 17394786 -5616758 + AT_rich Low_complexity Low_complexity 1 35 0 8 717 25 0 0 0 chr2L 17396209 17396234 -5615310 + AT_rich Low_complexity Low_complexity 1 25 0 8 717 248 91 23 0 chr2L 17398377 17398421 -5613123 + (TA)n Simple_repeat Simple_repeat 1 45 0 8 717 21 57 0 0 chr2L 17398976 17399011 -5612533 + AT_rich Low_complexity Low_complexity 1 35 0 8 717 448 116 0 21 chr2L 17402655 17402752 -5608792 + (CAG)n Simple_repeat Simple_repeat 2 96 0 8 717 22 56 0 0 chr2L 17405188 17405224 -5606320 + AT_rich Low_complexity Low_complexity 1 36 0 8 717 21 57 0 0 chr2L 17410465 17410500 -5601044 + AT_rich Low_complexity Low_complexity 1 35 0 8 717 207 244 0 0 chr2L 17413651 17413696 -5597848 + (CTG)n Simple_repeat Simple_repeat 2 46 0 8 717 37 0 0 0 chr2L 17414758 17414795 -5596749 + AT_rich Low_complexity Low_complexity 1 37 0 8 717 21 57 0 0 chr2L 17417946 17417981 -5593563 + AT_rich Low_complexity Low_complexity 1 35 0 8 717 24 53 0 0 chr2L 17419338 17419376 -5592168 + AT_rich Low_complexity Low_complexity 1 38 0 8 717 23 0 0 0 chr2L 17421480 17421503 -5590041 + AT_rich Low_complexity Low_complexity 1 23 0 8 717 22 80 0 0 chr2L 17421546 17421596 -5589948 + AT_rich Low_complexity Low_complexity 1 50 0 8 717 30 0 0 0 chr2L 17425860 17425890 -5585654 + AT_rich Low_complexity Low_complexity 1 30 0 8 717 24 67 0 0 chr2L 17427274 17427319 -5584225 + AT_rich Low_complexity Low_complexity 1 45 0 8 717 222 91 0 0 chr2L 17428098 17428131 -5583413 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 8 717 209 200 0 0 chr2L 17429888 17429928 -5581616 + GA-rich Low_complexity Low_complexity 1 40 0 8 717 25 0 0 0 chr2L 17430223 17430248 -5581296 + AT_rich Low_complexity Low_complexity 1 25 0 8 717 28 0 0 0 chr2L 17430290 17430318 -5581226 + AT_rich Low_complexity Low_complexity 1 28 0 8 717 414 0 0 0 chr2L 17432070 17432118 -5579426 + PROTOP_B DNA P 1106 1153 0 8 717 30 77 0 0 chr2L 17432227 17432292 -5579252 + AT_rich Low_complexity Low_complexity 1 65 0 8 718 215 145 50 50 chr2L 17435776 17435856 -5575688 + (TATAA)n Simple_repeat Simple_repeat 4 83 0 8 718 192 77 0 0 chr2L 17437202 17437228 -5574316 + (TTA)n Simple_repeat Simple_repeat 1 26 0 8 718 258 56 0 0 chr2L 17437266 17437302 -5574242 + (CTG)n Simple_repeat Simple_repeat 1 36 0 8 718 238 299 0 13 chr2L 17437516 17437594 -5573950 + (CTG)n Simple_repeat Simple_repeat 1 77 0 8 718 621 101 0 0 chr2L 17437658 17437757 -5573787 + (CTG)n Simple_repeat Simple_repeat 1 99 0 8 718 209 204 0 0 chr2L 17438604 17438653 -5572891 + T-rich Low_complexity Low_complexity 1 49 0 8 718 30 27 0 0 chr2L 17444689 17444726 -5566818 + AT_rich Low_complexity Low_complexity 1 37 0 8 718 29 0 0 0 chr2L 17448432 17448461 -5563083 + AT_rich Low_complexity Low_complexity 1 29 0 8 718 35 0 0 0 chr2L 17449555 17449590 -5561954 + AT_rich Low_complexity Low_complexity 1 35 0 8 718 219 146 0 0 chr2L 17449592 17449633 -5561911 + (TC)n Simple_repeat Simple_repeat 2 42 0 8 718 29 47 0 0 chr2L 17451680 17451723 -5559821 + AT_rich Low_complexity Low_complexity 1 43 0 8 718 206 256 0 0 chr2L 17456001 17456044 -5555500 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 8 718 296 253 0 69 chr2L 17456187 17456289 -5555255 + DNAREP1_DM LINE Penelope 493 587 -7 8 718 25 0 0 0 chr2L 17456317 17456342 -5555202 + AT_rich Low_complexity Low_complexity 1 25 0 8 718 30 77 0 0 chr2L 17456642 17456707 -5554837 + AT_rich Low_complexity Low_complexity 1 65 0 8 718 1191 95 202 21 chr2L 17458147 17458384 -5553160 - DNAREP1_DM LINE Penelope -313 281 2 8 718 33 0 0 0 chr2L 17459128 17459161 -5552383 + AT_rich Low_complexity Low_complexity 1 33 0 8 718 21 0 0 0 chr2L 17464764 17464785 -5546759 + AT_rich Low_complexity Low_complexity 1 21 0 8 718 32 75 0 0 chr2L 17464832 17464899 -5546645 + AT_rich Low_complexity Low_complexity 1 67 0 8 718 186 43 0 0 chr2L 17468405 17468428 -5543116 + (CAT)n Simple_repeat Simple_repeat 3 25 0 8 718 24 0 0 0 chr2L 17472540 17472564 -5538980 + AT_rich Low_complexity Low_complexity 1 24 0 8 718 42 0 0 0 chr2L 17473352 17473394 -5538150 + AT_rich Low_complexity Low_complexity 1 42 0 8 718 180 0 0 0 chr2L 17474694 17474714 -5536830 + (CATA)n Simple_repeat Simple_repeat 1 20 0 8 718 24 0 0 0 chr2L 17474784 17474808 -5536736 + AT_rich Low_complexity Low_complexity 1 24 0 8 718 201 121 0 0 chr2L 17475617 17475650 -5535894 + (CCG)n Simple_repeat Simple_repeat 2 34 0 8 718 28 29 0 0 chr2L 17481109 17481144 -5530400 + AT_rich Low_complexity Low_complexity 1 35 0 8 718 24 53 0 0 chr2L 17494726 17494764 -5516780 + AT_rich Low_complexity Low_complexity 1 38 0 8 718 22 0 0 0 chr2L 17495274 17495296 -5516248 + AT_rich Low_complexity Low_complexity 1 22 0 8 718 25 31 0 0 chr2L 17495529 17495561 -5515983 + AT_rich Low_complexity Low_complexity 1 32 0 8 718 197 196 18 0 chr2L 17497242 17497298 -5514246 + (CATA)n Simple_repeat Simple_repeat 3 59 0 8 718 24 0 0 0 chr2L 17502635 17502659 -5508885 + AT_rich Low_complexity Low_complexity 1 24 0 8 718 23 0 0 0 chr2L 17504197 17504220 -5507324 + AT_rich Low_complexity Low_complexity 1 23 0 8 718 23 33 0 0 chr2L 17513511 17513541 -5498003 + AT_rich Low_complexity Low_complexity 1 30 0 8 718 219 69 0 0 chr2L 17515955 17515984 -5495560 + (TATG)n Simple_repeat Simple_repeat 3 31 0 8 718 24 0 0 0 chr2L 17516141 17516165 -5495379 + AT_rich Low_complexity Low_complexity 1 24 0 8 718 246 62 0 0 chr2L 17517723 17517755 -5493789 + (ACTTG)n Simple_repeat Simple_repeat 3 34 0 8 718 336 141 268 0 chr2L 17520665 17520736 -5490808 - DNAREP1_DM LINE Penelope -486 108 19 8 718 244 265 0 0 chr2L 17521162 17521230 -5490314 + (TTCGGG)n Simple_repeat Simple_repeat 6 73 0 8 718 24 0 0 0 chr2L 17524525 17524549 -5486995 + AT_rich Low_complexity Low_complexity 1 24 0 8 718 22 35 0 0 chr2L 17525609 17525638 -5485906 + AT_rich Low_complexity Low_complexity 1 29 0 8 718 252 0 0 0 chr2L 17531662 17531690 -5479854 + (TA)n Simple_repeat Simple_repeat 1 28 0 8 718 22 0 0 0 chr2L 17532337 17532359 -5479185 + AT_rich Low_complexity Low_complexity 1 22 0 8 718 300 27 0 0 chr2L 17535912 17535949 -5475595 + (TTGG)n Simple_repeat Simple_repeat 4 40 0 8 718 387 41 0 0 chr2L 17536675 17536724 -5474820 + (TA)n Simple_repeat Simple_repeat 1 49 0 8 718 22 0 0 0 chr2L 17537539 17537561 -5473983 + AT_rich Low_complexity Low_complexity 1 22 0 8 718 252 86 0 0 chr2L 17539176 17539211 -5472333 + (TA)n Simple_repeat Simple_repeat 1 35 0 8 718 21 0 0 0 chr2L 17540177 17540198 -5471346 + AT_rich Low_complexity Low_complexity 1 21 0 8 718 260 83 0 0 chr2L 17542275 17542311 -5469233 + DNAREP1_DM LINE Penelope 545 580 -14 8 718 23 0 0 0 chr2L 17542426 17542449 -5469095 + AT_rich Low_complexity Low_complexity 1 23 0 8 718 194 192 0 19 chr2L 17543083 17543136 -5468408 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 718 206 225 0 0 chr2L 17543242 17543282 -5468262 + (CATTT)n Simple_repeat Simple_repeat 1 40 0 8 718 25 0 0 0 chr2L 17543365 17543390 -5468154 + AT_rich Low_complexity Low_complexity 1 25 0 8 718 30 59 0 0 chr2L 17544980 17545031 -5466513 + AT_rich Low_complexity Low_complexity 1 51 0 8 718 24 0 0 0 chr2L 17548750 17548774 -5462770 + AT_rich Low_complexity Low_complexity 1 24 0 8 718 180 97 0 0 chr2L 17549227 17549258 -5462286 + (CAGT)n Simple_repeat Simple_repeat 4 34 0 8 718 200 71 22 87 chr2L 17549557 17549603 -5461941 + (AAATG)n Simple_repeat Simple_repeat 4 46 0 8 718 2099 114 17 45 chr2L 17550715 17551072 -5460472 - Transib-N1_DM DNA Transib -32 482 136 8 718 24 32 0 0 chr2L 17551345 17551376 -5460168 + AT_rich Low_complexity Low_complexity 1 31 0 8 718 332 184 319 16 chr2L 17555858 17556046 -5455498 + DNAREP1_DM LINE Penelope 246 490 -104 8 718 321 140 0 0 chr2L 17556492 17556549 -5454995 + (ATG)n Simple_repeat Simple_repeat 1 57 0 8 718 22 0 0 0 chr2L 17557253 17557275 -5454269 + AT_rich Low_complexity Low_complexity 1 22 0 8 718 21 100 0 0 chr2L 17558183 17558253 -5453291 + AT_rich Low_complexity Low_complexity 1 70 0 8 718 219 167 0 0 chr2L 17558399 17558441 -5453103 + (CAG)n Simple_repeat Simple_repeat 3 44 0 8 718 230 206 96 0 chr2L 17558733 17558806 -5452738 + ROO_I LTR Pao 664 743 -7513 8 718 269 307 7 21 chr2L 17558982 17559125 -5452419 + (CAA)n Simple_repeat Simple_repeat 1 141 0 8 718 332 211 21 0 chr2L 17559249 17559344 -5452200 + ROO_I LTR Pao 655 751 -7505 8 718 223 202 24 0 chr2L 17559568 17559652 -5451892 + (CTG)n Simple_repeat Simple_repeat 1 86 0 8 718 228 35 0 0 chr2L 17562189 17562218 -5449326 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 718 21 57 0 0 chr2L 17562715 17562750 -5448794 + AT_rich Low_complexity Low_complexity 1 35 0 8 718 27 81 0 0 chr2L 17562783 17562845 -5448699 + AT_rich Low_complexity Low_complexity 1 62 0 8 719 27 0 0 0 chr2L 17564106 17564133 -5447411 + AT_rich Low_complexity Low_complexity 1 27 0 8 719 22 56 0 0 chr2L 17566632 17566668 -5444876 + AT_rich Low_complexity Low_complexity 1 36 0 8 719 287 197 0 0 chr2L 17567504 17567565 -5443979 + DNAREP1_DM LINE Penelope 2 62 -532 8 719 412 159 178 0 chr2L 17567765 17567872 -5443672 + DNAREP1_DM LINE Penelope 469 594 0 8 719 24 0 0 0 chr2L 17568313 17568337 -5443207 + AT_rich Low_complexity Low_complexity 1 24 0 8 719 22 0 0 0 chr2L 17571960 17571982 -5439562 + AT_rich Low_complexity Low_complexity 1 22 0 8 719 33 80 0 0 chr2L 17575026 17575101 -5436443 + AT_rich Low_complexity Low_complexity 1 75 0 8 719 195 69 0 0 chr2L 17575419 17575448 -5436096 + (ATAGG)n Simple_repeat Simple_repeat 4 32 0 8 719 26 30 0 0 chr2L 17576707 17576740 -5434804 + AT_rich Low_complexity Low_complexity 1 33 0 8 719 363 121 0 0 chr2L 17577376 17577434 -5434110 + (CTG)n Simple_repeat Simple_repeat 3 60 0 8 719 21 0 0 0 chr2L 17580873 17580894 -5430650 + AT_rich Low_complexity Low_complexity 1 21 0 8 719 204 143 0 0 chr2L 17582946 17582988 -5428556 + (A)n Simple_repeat Simple_repeat 1 42 0 8 719 246 32 0 0 chr2L 17584541 17584572 -5426972 + (TTATA)n Simple_repeat Simple_repeat 1 31 0 8 719 24 91 0 0 chr2L 17584617 17584683 -5426861 + AT_rich Low_complexity Low_complexity 1 66 0 8 719 25 0 0 0 chr2L 17587868 17587893 -5423651 + AT_rich Low_complexity Low_complexity 1 25 0 8 719 27 0 0 0 chr2L 17588087 17588114 -5423430 + AT_rich Low_complexity Low_complexity 1 27 0 8 719 22 80 0 0 chr2L 17588832 17588882 -5422662 + AT_rich Low_complexity Low_complexity 1 50 0 8 719 22 0 0 0 chr2L 17589692 17589714 -5421830 + AT_rich Low_complexity Low_complexity 1 22 0 8 719 230 95 24 0 chr2L 17592411 17592453 -5419091 + (TA)n Simple_repeat Simple_repeat 2 44 0 8 719 34 42 0 0 chr2L 17594024 17594072 -5417472 + AT_rich Low_complexity Low_complexity 1 48 0 8 719 23 33 0 0 chr2L 17597829 17597859 -5413685 + AT_rich Low_complexity Low_complexity 1 30 0 8 719 21 36 0 0 chr2L 17601878 17601906 -5409638 + AT_rich Low_complexity Low_complexity 1 28 0 8 719 227 210 24 24 chr2L 17602761 17602844 -5408700 + T-rich Low_complexity Low_complexity 1 83 0 8 719 27 100 0 0 chr2L 17603021 17603111 -5408433 + AT_rich Low_complexity Low_complexity 1 90 0 8 719 24 53 0 0 chr2L 17603996 17604034 -5407510 + AT_rich Low_complexity Low_complexity 1 38 0 8 719 21 36 0 0 chr2L 17604116 17604144 -5407400 + AT_rich Low_complexity Low_complexity 1 28 0 8 719 24 0 0 0 chr2L 17605037 17605061 -5406483 + AT_rich Low_complexity Low_complexity 1 24 0 8 719 21 36 0 0 chr2L 17605090 17605118 -5406426 + AT_rich Low_complexity Low_complexity 1 28 0 8 719 270 273 0 33 chr2L 17606924 17607015 -5404529 + CT-rich Low_complexity Low_complexity 3 90 0 8 719 219 204 0 0 chr2L 17610244 17610298 -5401246 + (CTG)n Simple_repeat Simple_repeat 3 56 0 8 719 26 0 0 0 chr2L 17610833 17610859 -5400685 + AT_rich Low_complexity Low_complexity 1 26 0 8 719 48 0 0 0 chr2L 17611649 17611697 -5399847 + AT_rich Low_complexity Low_complexity 1 48 0 8 719 21 0 0 0 chr2L 17613440 17613461 -5398083 + AT_rich Low_complexity Low_complexity 1 21 0 8 719 198 0 0 0 chr2L 17613551 17613573 -5397971 + (A)n Simple_repeat Simple_repeat 1 22 0 8 719 189 0 0 0 chr2L 17613699 17613720 -5397824 + (GTCTG)n Simple_repeat Simple_repeat 4 24 0 8 719 192 40 0 0 chr2L 17614080 17614105 -5397439 + (A)n Simple_repeat Simple_repeat 1 25 0 8 719 34 0 0 0 chr2L 17616072 17616106 -5395438 + AT_rich Low_complexity Low_complexity 1 34 0 8 719 234 0 0 0 chr2L 17616157 17616183 -5395361 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 719 30 0 0 0 chr2L 17617470 17617500 -5394044 + AT_rich Low_complexity Low_complexity 1 30 0 8 719 28 61 0 0 chr2L 17619914 17619963 -5391581 + AT_rich Low_complexity Low_complexity 1 49 0 8 719 27 87 0 0 chr2L 17622468 17622537 -5389007 + AT_rich Low_complexity Low_complexity 1 69 0 8 719 30 69 0 0 chr2L 17624803 17624861 -5386683 + AT_rich Low_complexity Low_complexity 1 58 0 8 719 205 196 0 21 chr2L 17624956 17625003 -5386541 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 719 33 25 0 0 chr2L 17628332 17628372 -5383172 + AT_rich Low_complexity Low_complexity 1 40 0 8 719 203 0 0 36 chr2L 17629083 17629111 -5382433 + (TA)n Simple_repeat Simple_repeat 1 27 0 8 719 21 57 0 0 chr2L 17629610 17629645 -5381899 + AT_rich Low_complexity Low_complexity 1 35 0 8 719 21 57 0 0 chr2L 17631174 17631209 -5380335 + AT_rich Low_complexity Low_complexity 1 35 0 8 719 237 33 0 0 chr2L 17632928 17632958 -5378586 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 719 30 0 0 0 chr2L 17637559 17637589 -5373955 + AT_rich Low_complexity Low_complexity 1 30 0 8 719 23 0 0 0 chr2L 17638764 17638787 -5372757 + AT_rich Low_complexity Low_complexity 1 23 0 8 719 400 207 155 14 chr2L 17638940 17639082 -5372462 - DNAREP1_DM LINE Penelope 0 594 433 8 719 201 108 0 0 chr2L 17639495 17639532 -5372012 + (CTG)n Simple_repeat Simple_repeat 3 39 0 8 719 21 0 0 0 chr2L 17641326 17641347 -5370197 + AT_rich Low_complexity Low_complexity 1 21 0 8 719 29 84 0 0 chr2L 17642174 17642245 -5369299 + AT_rich Low_complexity Low_complexity 1 71 0 8 719 31 0 0 0 chr2L 17644342 17644373 -5367171 + AT_rich Low_complexity Low_complexity 1 31 0 8 719 220 286 0 0 chr2L 17647073 17647143 -5364401 + T-rich Low_complexity Low_complexity 1 70 0 8 719 226 218 0 18 chr2L 17647183 17647239 -5364305 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 719 201 261 0 14 chr2L 17647546 17647616 -5363928 + T-rich Low_complexity Low_complexity 5 73 0 8 719 218 217 0 0 chr2L 17649308 17649354 -5362190 + T-rich Low_complexity Low_complexity 1 46 0 8 719 206 211 17 17 chr2L 17649534 17649592 -5361952 + (TA)n Simple_repeat Simple_repeat 1 58 0 8 719 23 0 0 0 chr2L 17650644 17650667 -5360877 + AT_rich Low_complexity Low_complexity 1 23 0 8 719 22 0 0 0 chr2L 17652493 17652515 -5359029 + AT_rich Low_complexity Low_complexity 1 22 0 8 719 21 36 0 0 chr2L 17653009 17653037 -5358507 + AT_rich Low_complexity Low_complexity 1 28 0 8 719 21 0 0 0 chr2L 17655936 17655957 -5355587 + AT_rich Low_complexity Low_complexity 1 21 0 8 719 23 33 0 0 chr2L 17656103 17656133 -5355411 + AT_rich Low_complexity Low_complexity 1 30 0 8 719 21 0 0 0 chr2L 17663026 17663047 -5348497 + AT_rich Low_complexity Low_complexity 1 21 0 8 719 22 0 0 0 chr2L 17663970 17663992 -5347552 + AT_rich Low_complexity Low_complexity 1 22 0 8 719 25 0 0 0 chr2L 17664613 17664638 -5346906 + AT_rich Low_complexity Low_complexity 1 25 0 8 719 189 154 0 0 chr2L 17667656 17667695 -5343849 + T-rich Low_complexity Low_complexity 1 39 0 8 719 207 0 0 0 chr2L 17667916 17667939 -5343605 + (T)n Simple_repeat Simple_repeat 1 23 0 8 719 24 0 0 0 chr2L 17669062 17669086 -5342458 + AT_rich Low_complexity Low_complexity 1 24 0 8 719 22 0 0 0 chr2L 17672795 17672817 -5338727 + AT_rich Low_complexity Low_complexity 1 22 0 8 719 34 0 0 0 chr2L 17676038 17676072 -5335472 + AT_rich Low_complexity Low_complexity 1 34 0 8 719 27 0 0 0 chr2L 17683468 17683495 -5328049 + AT_rich Low_complexity Low_complexity 1 27 0 8 719 21 89 0 0 chr2L 17685080 17685136 -5326408 + AT_rich Low_complexity Low_complexity 1 56 0 8 719 232 287 0 33 chr2L 17687153 17687243 -5324301 + (TTG)n Simple_repeat Simple_repeat 1 87 0 8 719 40516 1 0 0 chr2L 17687554 17692247 -5319297 + FW_DM LINE Jockey 1 4692 0 8 720 212 229 0 32 chr2L 17700016 17700079 -5311465 + (ATTG)n Simple_repeat Simple_repeat 4 64 0 8 720 30 0 0 0 chr2L 17702584 17702614 -5308930 + AT_rich Low_complexity Low_complexity 1 30 0 8 720 26 0 0 0 chr2L 17708538 17708564 -5302980 + AT_rich Low_complexity Low_complexity 1 26 0 8 720 21 0 0 0 chr2L 17709071 17709092 -5302452 + AT_rich Low_complexity Low_complexity 1 21 0 8 720 21 0 0 0 chr2L 17711982 17712003 -5299541 + AT_rich Low_complexity Low_complexity 1 21 0 8 720 36 53 0 0 chr2L 17713810 17713867 -5297677 + AT_rich Low_complexity Low_complexity 1 57 0 8 720 29 28 0 0 chr2L 17714875 17714911 -5296633 + AT_rich Low_complexity Low_complexity 1 36 0 8 720 24 32 0 0 chr2L 17717446 17717477 -5294067 + AT_rich Low_complexity Low_complexity 1 31 0 8 720 216 67 0 0 chr2L 17721762 17721792 -5289752 + (T)n Simple_repeat Simple_repeat 1 30 0 8 720 7959 1 0 0 chr2L 17727903 17728807 -5282737 + HOBO DNA hAT 1 904 -2112 8 720 4353 0 0 10 chr2L 17728805 17729309 -5282235 + HOBO DNA hAT 2518 3016 0 8 720 24 53 0 0 chr2L 17729845 17729883 -5281661 + AT_rich Low_complexity Low_complexity 1 38 0 8 720 47 44 0 0 chr2L 17729895 17729963 -5281581 + AT_rich Low_complexity Low_complexity 1 68 0 8 720 22 0 0 0 chr2L 17734452 17734474 -5277070 + AT_rich Low_complexity Low_complexity 1 22 0 8 720 33 56 0 0 chr2L 17740023 17740077 -5271467 + AT_rich Low_complexity Low_complexity 1 54 0 8 720 21 0 0 0 chr2L 17744225 17744246 -5267298 + AT_rich Low_complexity Low_complexity 1 21 0 8 720 21 36 0 0 chr2L 17746483 17746511 -5265033 + AT_rich Low_complexity Low_complexity 1 28 0 8 720 239 246 0 14 chr2L 17747464 17747534 -5264010 + (CA)n Simple_repeat Simple_repeat 1 69 0 8 720 30 27 0 0 chr2L 17750305 17750342 -5261202 + AT_rich Low_complexity Low_complexity 1 37 0 8 720 27 0 0 0 chr2L 17750401 17750428 -5261116 + AT_rich Low_complexity Low_complexity 1 27 0 8 720 26 0 0 0 chr2L 17755939 17755965 -5255579 + AT_rich Low_complexity Low_complexity 1 26 0 8 720 25 31 0 0 chr2L 17757041 17757073 -5254471 + AT_rich Low_complexity Low_complexity 1 32 0 8 720 24 32 0 0 chr2L 17757122 17757153 -5254391 + AT_rich Low_complexity Low_complexity 1 31 0 8 720 192 179 0 0 chr2L 17758575 17758614 -5252930 + (CCCGAA)n Simple_repeat Simple_repeat 1 39 0 8 720 262 220 110 0 chr2L 17759243 17759334 -5252210 - DNAREP1_DM LINE Penelope 0 594 494 8 720 21 57 0 0 chr2L 17759461 17759496 -5252048 + AT_rich Low_complexity Low_complexity 1 35 0 8 720 29 47 0 0 chr2L 17760181 17760224 -5251320 + AT_rich Low_complexity Low_complexity 1 43 0 8 720 24 0 0 0 chr2L 17761242 17761266 -5250278 + AT_rich Low_complexity Low_complexity 1 24 0 8 720 209 196 19 38 chr2L 17763213 17763266 -5248278 + (CAGT)n Simple_repeat Simple_repeat 1 52 0 8 720 239 246 0 0 chr2L 17763346 17763407 -5248137 + (TTCA)n Simple_repeat Simple_repeat 2 62 0 8 720 200 132 26 0 chr2L 17763913 17763951 -5247593 + T-rich Low_complexity Low_complexity 1 39 0 8 720 23 0 0 0 chr2L 17767209 17767232 -5244312 + AT_rich Low_complexity Low_complexity 1 23 0 8 720 21 71 0 0 chr2L 17767912 17767954 -5243590 + AT_rich Low_complexity Low_complexity 1 42 0 8 720 22 0 0 0 chr2L 17768524 17768546 -5242998 + AT_rich Low_complexity Low_complexity 1 22 0 8 720 24 0 0 0 chr2L 17769552 17769576 -5241968 + AT_rich Low_complexity Low_complexity 1 24 0 8 720 186 43 0 0 chr2L 17771386 17771409 -5240135 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 8 720 23 0 0 0 chr2L 17774201 17774224 -5237320 + AT_rich Low_complexity Low_complexity 1 23 0 8 720 26 30 0 0 chr2L 17776304 17776337 -5235207 + AT_rich Low_complexity Low_complexity 1 33 0 8 720 22 35 0 0 chr2L 17777714 17777743 -5233801 + AT_rich Low_complexity Low_complexity 1 29 0 8 720 38 22 0 0 chr2L 17778060 17778105 -5233439 + AT_rich Low_complexity Low_complexity 1 45 0 8 720 214 306 0 20 chr2L 17781573 17781673 -5229871 + (CAA)n Simple_repeat Simple_repeat 2 99 0 8 720 186 43 0 0 chr2L 17781988 17782011 -5229533 + (CAGT)n Simple_repeat Simple_repeat 1 23 0 8 720 21 36 0 0 chr2L 17782074 17782102 -5229442 + AT_rich Low_complexity Low_complexity 1 28 0 8 720 363 189 200 0 chr2L 17783619 17783714 -5227830 - DNAREP1_DM LINE Penelope -480 114 1 8 720 24 0 0 0 chr2L 17788903 17788927 -5222617 + AT_rich Low_complexity Low_complexity 1 24 0 8 720 21 0 0 0 chr2L 17790138 17790159 -5221385 + AT_rich Low_complexity Low_complexity 1 21 0 8 720 25 51 0 0 chr2L 17790224 17790263 -5221281 + AT_rich Low_complexity Low_complexity 1 39 0 8 720 22 56 0 0 chr2L 17790367 17790403 -5221141 + AT_rich Low_complexity Low_complexity 1 36 0 8 720 239 164 55 0 chr2L 17791050 17791105 -5220439 - DNAREP1_DM LINE Penelope -104 490 433 8 720 24 85 0 0 chr2L 17793773 17793832 -5217712 + AT_rich Low_complexity Low_complexity 1 59 0 8 720 29 28 0 0 chr2L 17794931 17794967 -5216577 + AT_rich Low_complexity Low_complexity 1 36 0 8 720 21 82 0 0 chr2L 17795033 17795082 -5216462 + AT_rich Low_complexity Low_complexity 1 49 0 8 720 22 0 0 0 chr2L 17800428 17800450 -5211094 + AT_rich Low_complexity Low_complexity 1 22 0 8 720 24 32 0 0 chr2L 17801091 17801122 -5210422 + AT_rich Low_complexity Low_complexity 1 31 0 8 720 21 0 0 0 chr2L 17808500 17808521 -5203023 + AT_rich Low_complexity Low_complexity 1 21 0 8 720 23 0 0 0 chr2L 17809423 17809446 -5202098 + AT_rich Low_complexity Low_complexity 1 23 0 8 720 22 0 0 0 chr2L 17810965 17810987 -5200557 + AT_rich Low_complexity Low_complexity 1 22 0 8 720 203 179 0 0 chr2L 17818994 17819033 -5192511 + T-rich Low_complexity Low_complexity 1 39 0 8 720 2260 0 4 0 chr2L 17819977 17820252 -5191292 - Copia_LTR LTR Copia 0 276 1 8 720 39225 1 0 0 chr2L 17820252 17824847 -5186697 - Copia_I LTR Copia 0 4593 1 8 720 2260 0 4 0 chr2L 17824847 17825122 -5186422 - Copia_LTR LTR Copia 0 276 1 8 721 22 35 0 0 chr2L 17827900 17827929 -5183615 + AT_rich Low_complexity Low_complexity 1 29 0 8 721 195 100 0 0 chr2L 17832640 17832670 -5178874 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 721 22 0 0 0 chr2L 17833541 17833563 -5177981 + AT_rich Low_complexity Low_complexity 1 22 0 8 721 26 50 0 0 chr2L 17834335 17834375 -5177169 + AT_rich Low_complexity Low_complexity 1 40 0 8 721 23 0 0 0 chr2L 17838561 17838584 -5172960 + AT_rich Low_complexity Low_complexity 1 23 0 8 721 23 0 0 0 chr2L 17840887 17840910 -5170634 + AT_rich Low_complexity Low_complexity 1 23 0 8 721 202 209 0 0 chr2L 17842172 17842215 -5169329 + (ATTG)n Simple_repeat Simple_repeat 1 43 0 8 721 22 0 0 0 chr2L 17846825 17846847 -5164697 + AT_rich Low_complexity Low_complexity 1 22 0 8 721 21 57 0 0 chr2L 17847355 17847390 -5164154 + AT_rich Low_complexity Low_complexity 1 35 0 8 721 22 56 0 0 chr2L 17851613 17851649 -5159895 + AT_rich Low_complexity Low_complexity 1 36 0 8 721 27 20 0 57 chr2L 17852564 17852617 -5158927 + AT_rich Low_complexity Low_complexity 1 50 0 8 721 216 200 0 0 chr2L 17854396 17854446 -5157098 + (TTG)n Simple_repeat Simple_repeat 1 50 0 8 721 23 54 0 0 chr2L 17855668 17855705 -5155839 + AT_rich Low_complexity Low_complexity 1 37 0 8 721 22 0 0 0 chr2L 17857662 17857684 -5153860 + AT_rich Low_complexity Low_complexity 1 22 0 8 721 26 30 0 0 chr2L 17861760 17861793 -5149751 + AT_rich Low_complexity Low_complexity 1 33 0 8 721 21 0 0 0 chr2L 17865250 17865271 -5146273 + AT_rich Low_complexity Low_complexity 1 21 0 8 721 222 37 0 0 chr2L 17866973 17867000 -5144544 + (TA)n Simple_repeat Simple_repeat 1 27 0 8 721 33 90 0 0 chr2L 17876140 17876229 -5135315 + AT_rich Low_complexity Low_complexity 1 89 0 8 721 29 90 0 0 chr2L 17879150 17879228 -5132316 + AT_rich Low_complexity Low_complexity 1 78 0 8 721 183 80 0 0 chr2L 17879942 17879967 -5131577 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 721 241 82 41 0 chr2L 17880425 17880474 -5131070 + (TA)n Simple_repeat Simple_repeat 2 52 0 8 721 22 35 0 0 chr2L 17893860 17893889 -5117655 + AT_rich Low_complexity Low_complexity 1 29 0 8 721 26 30 0 0 chr2L 17902777 17902810 -5108734 + AT_rich Low_complexity Low_complexity 1 33 0 8 721 23 33 0 0 chr2L 17908164 17908194 -5103350 + AT_rich Low_complexity Low_complexity 1 30 0 8 721 24 0 0 0 chr2L 17909189 17909213 -5102331 + AT_rich Low_complexity Low_complexity 1 24 0 8 721 21 0 0 0 chr2L 17910146 17910167 -5101377 + AT_rich Low_complexity Low_complexity 1 21 0 8 721 24 32 0 0 chr2L 17911319 17911350 -5100194 + AT_rich Low_complexity Low_complexity 1 31 0 8 721 18287 1 0 1 chr2L 17912011 17914134 -5097410 - POGO DNA Pogo 0 2121 1 8 721 27 49 0 0 chr2L 17915568 17915609 -5095935 + AT_rich Low_complexity Low_complexity 1 41 0 8 721 222 37 0 0 chr2L 17916104 17916131 -5095413 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 721 36 53 0 0 chr2L 17916631 17916688 -5094856 + AT_rich Low_complexity Low_complexity 1 57 0 8 721 183 104 41 20 chr2L 17920613 17920662 -5090882 + T-rich Low_complexity Low_complexity 3 52 0 8 721 32 0 0 0 chr2L 17922410 17922442 -5089102 + AT_rich Low_complexity Low_complexity 1 32 0 8 721 25 0 0 0 chr2L 17923312 17923337 -5088207 + AT_rich Low_complexity Low_complexity 1 25 0 8 721 229 192 19 0 chr2L 17924320 17924372 -5087172 + DNAREP1_DM LINE Penelope 1 53 -541 8 721 234 229 0 14 chr2L 17924540 17924611 -5086933 + DNAREP1_DM LINE Penelope 525 594 0 8 721 27 0 0 0 chr2L 17927579 17927606 -5083938 + AT_rich Low_complexity Low_complexity 1 27 0 8 721 27 49 0 0 chr2L 17927931 17927972 -5083572 + AT_rich Low_complexity Low_complexity 1 41 0 8 721 24 32 0 0 chr2L 17930169 17930200 -5081344 + AT_rich Low_complexity Low_complexity 1 31 0 8 721 21 57 0 0 chr2L 17930329 17930364 -5081180 + AT_rich Low_complexity Low_complexity 1 35 0 8 721 27 49 0 0 chr2L 17930837 17930878 -5080666 + AT_rich Low_complexity Low_complexity 1 41 0 8 721 24 67 0 0 chr2L 17931611 17931656 -5079888 + AT_rich Low_complexity Low_complexity 1 45 0 8 721 202 200 0 0 chr2L 17935294 17935334 -5076210 + (AAATG)n Simple_repeat Simple_repeat 1 40 0 8 721 327 49 0 0 chr2L 17937657 17937698 -5073846 + (TA)n Simple_repeat Simple_repeat 2 42 0 8 721 21 36 0 0 chr2L 17938043 17938071 -5073473 + AT_rich Low_complexity Low_complexity 1 28 0 8 721 25 51 0 0 chr2L 17938088 17938127 -5073417 + AT_rich Low_complexity Low_complexity 1 39 0 8 721 288 243 26 51 chr2L 17941321 17941438 -5070106 + DNAREP1_DM LINE Penelope 5 118 -476 8 721 28 86 0 0 chr2L 17942749 17942819 -5068725 + AT_rich Low_complexity Low_complexity 1 70 0 8 721 4650 2 2 10 chr2L 17952003 17952513 -5059031 - HOBO DNA hAT 0 3016 2511 8 721 8493 1 0 0 chr2L 17952505 17953409 -5058135 - HOBO DNA hAT -2112 904 1 8 721 24 53 0 0 chr2L 17954868 17954906 -5056638 + AT_rich Low_complexity Low_complexity 1 38 0 8 722 207 171 0 0 chr2L 17957498 17957533 -5054011 + (CGATG)n Simple_repeat Simple_repeat 1 35 0 8 722 210 71 0 0 chr2L 17959494 17959522 -5052022 + (TA)n Simple_repeat Simple_repeat 1 28 0 8 722 21 36 0 0 chr2L 17959634 17959662 -5051882 + AT_rich Low_complexity Low_complexity 1 28 0 8 722 268 213 11 11 chr2L 17972573 17972668 -5038876 + ROO_I LTR Pao 640 734 -7522 8 722 363 113 0 0 chr2L 17973153 17973215 -5038329 + (CAG)n Simple_repeat Simple_repeat 1 62 0 8 722 248 262 0 0 chr2L 17973268 17973329 -5038215 + (CCG)n Simple_repeat Simple_repeat 2 62 0 8 722 1640 109 68 60 chr2L 17973633 17974103 -5037441 - DNAREP1_DM LINE Penelope 0 594 1 8 722 23 0 0 0 chr2L 17976004 17976027 -5035517 + AT_rich Low_complexity Low_complexity 1 23 0 8 722 23 68 0 0 chr2L 17977250 17977294 -5034250 + AT_rich Low_complexity Low_complexity 1 44 0 8 722 267 244 0 37 chr2L 17982710 17982791 -5028753 - DNAREP1_DM LINE Penelope -87 507 430 8 722 21 0 0 0 chr2L 17987698 17987719 -5023825 + AT_rich Low_complexity Low_complexity 1 21 0 8 722 30 0 0 0 chr2L 17988770 17988800 -5022744 + AT_rich Low_complexity Low_complexity 1 30 0 8 722 27 0 0 0 chr2L 17994617 17994644 -5016900 + AT_rich Low_complexity Low_complexity 1 27 0 8 722 200 204 0 0 chr2L 17995624 17995668 -5015876 + (AAATG)n Simple_repeat Simple_repeat 2 45 0 8 722 26 30 0 0 chr2L 17996534 17996567 -5014977 + AT_rich Low_complexity Low_complexity 1 33 0 8 722 207 300 29 0 chr2L 17996704 17996774 -5014770 + (TCCG)n Simple_repeat Simple_repeat 1 72 0 8 722 210 255 0 0 chr2L 17996712 17996759 -5014785 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 8 722 30 45 0 0 chr2L 17997649 17997693 -5013851 + AT_rich Low_complexity Low_complexity 1 44 0 8 722 21 0 0 0 chr2L 17998220 17998241 -5013303 + AT_rich Low_complexity Low_complexity 1 21 0 8 722 27 0 0 0 chr2L 17998281 17998308 -5013236 + AT_rich Low_complexity Low_complexity 1 27 0 8 722 396 273 0 21 chr2L 17999736 17999878 -5011666 - DNAREP1_DM LINE Penelope -455 139 1 8 722 29 47 0 0 chr2L 18002754 18002797 -5008747 + AT_rich Low_complexity Low_complexity 1 43 0 8 722 34 0 0 0 chr2L 18003630 18003664 -5007880 + AT_rich Low_complexity Low_complexity 1 34 0 8 722 21 0 0 0 chr2L 18005569 18005590 -5005954 + AT_rich Low_complexity Low_complexity 1 21 0 8 722 223 169 15 30 chr2L 18007173 18007240 -5004304 + (TAA)n Simple_repeat Simple_repeat 1 66 0 8 722 928 116 266 31 chr2L 18011676 18012011 -4999533 - DNAREP1_DM LINE Penelope 0 594 182 8 722 698 128 0 0 chr2L 18012042 18012151 -4999393 - DNAREP1_DM LINE Penelope -485 109 1 8 722 23 0 0 0 chr2L 18013244 18013267 -4998277 + AT_rich Low_complexity Low_complexity 1 23 0 8 722 21 23 0 64 chr2L 18014549 18014596 -4996948 + AT_rich Low_complexity Low_complexity 1 44 0 8 722 21 0 0 0 chr2L 18015648 18015669 -4995875 + AT_rich Low_complexity Low_complexity 1 21 0 8 722 27 0 0 0 chr2L 18016169 18016196 -4995348 + AT_rich Low_complexity Low_complexity 1 27 0 8 722 201 39 0 0 chr2L 18020933 18020959 -4990585 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 722 21 57 0 0 chr2L 18022303 18022338 -4989206 + AT_rich Low_complexity Low_complexity 1 35 0 8 722 23 0 0 0 chr2L 18025295 18025318 -4986226 + AT_rich Low_complexity Low_complexity 1 23 0 8 722 23 0 0 0 chr2L 18025843 18025866 -4985678 + AT_rich Low_complexity Low_complexity 1 23 0 8 722 384 40 0 0 chr2L 18028106 18028156 -4983388 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 722 25 0 0 0 chr2L 18029291 18029316 -4982228 + AT_rich Low_complexity Low_complexity 1 25 0 8 722 22 0 0 0 chr2L 18033222 18033244 -4978300 + AT_rich Low_complexity Low_complexity 1 22 0 8 722 24 53 0 0 chr2L 18037896 18037934 -4973610 + AT_rich Low_complexity Low_complexity 1 38 0 8 722 21 0 0 0 chr2L 18038231 18038252 -4973292 + AT_rich Low_complexity Low_complexity 1 21 0 8 722 40 49 0 0 chr2L 18039826 18039887 -4971657 + AT_rich Low_complexity Low_complexity 1 61 0 8 722 25 95 0 0 chr2L 18042880 18042954 -4968590 + AT_rich Low_complexity Low_complexity 1 74 0 8 722 25 65 0 0 chr2L 18042992 18043038 -4968506 + AT_rich Low_complexity Low_complexity 1 46 0 8 722 195 42 0 0 chr2L 18043868 18043892 -4967652 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 722 22 0 0 0 chr2L 18044542 18044564 -4966980 + AT_rich Low_complexity Low_complexity 1 22 0 8 722 216 67 0 0 chr2L 18046155 18046185 -4965359 + (T)n Simple_repeat Simple_repeat 1 30 0 8 722 185 178 0 22 chr2L 18046931 18046977 -4964567 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 722 21 36 0 0 chr2L 18048447 18048475 -4963069 + AT_rich Low_complexity Low_complexity 1 28 0 8 722 23 33 0 0 chr2L 18050587 18050617 -4960927 + AT_rich Low_complexity Low_complexity 1 30 0 8 722 3766 0 0 0 chr2L 18051930 18052358 -4959186 + ROO_LTR LTR Pao 1 428 0 8 722 44962 0 1 0 chr2L 18052358 18060605 -4950939 + ROO_I LTR Pao 1 8256 0 8 722 3644 0 0 0 chr2L 18060605 18061019 -4950525 + ROO_LTR LTR Pao 1 414 -14 8 722 27 0 0 0 chr2L 18062184 18062211 -4949333 + AT_rich Low_complexity Low_complexity 1 27 0 8 722 32 0 0 0 chr2L 18066546 18066578 -4944966 + AT_rich Low_complexity Low_complexity 1 32 0 8 722 31 0 0 0 chr2L 18068625 18068656 -4942888 + AT_rich Low_complexity Low_complexity 1 31 0 8 722 22 35 0 0 chr2L 18072740 18072769 -4938775 + AT_rich Low_complexity Low_complexity 1 29 0 8 722 35 54 0 0 chr2L 18076227 18076283 -4935261 + AT_rich Low_complexity Low_complexity 1 56 0 8 722 24 0 0 0 chr2L 18083581 18083605 -4927939 + AT_rich Low_complexity Low_complexity 1 24 0 8 722 22 35 0 0 chr2L 18083757 18083786 -4927758 + AT_rich Low_complexity Low_complexity 1 29 0 8 722 24 53 0 0 chr2L 18083846 18083884 -4927660 + AT_rich Low_complexity Low_complexity 1 38 0 8 723 22 35 0 0 chr2L 18091285 18091314 -4920230 + AT_rich Low_complexity Low_complexity 1 29 0 8 723 35 71 0 0 chr2L 18092530 18092600 -4918944 + AT_rich Low_complexity Low_complexity 1 70 0 8 723 188 184 20 0 chr2L 18095123 18095172 -4916372 + (CAA)n Simple_repeat Simple_repeat 1 50 0 8 723 240 35 0 0 chr2L 18095613 18095642 -4915902 + (TA)n Simple_repeat Simple_repeat 2 30 0 8 723 27 0 0 0 chr2L 18100385 18100412 -4911132 + AT_rich Low_complexity Low_complexity 1 27 0 8 723 22 0 0 0 chr2L 18101519 18101541 -4910003 + AT_rich Low_complexity Low_complexity 1 22 0 8 723 27 62 0 0 chr2L 18104985 18105033 -4906511 + AT_rich Low_complexity Low_complexity 1 48 0 8 723 22 0 0 0 chr2L 18105179 18105201 -4906343 + AT_rich Low_complexity Low_complexity 1 22 0 8 723 23 0 0 0 chr2L 18106405 18106428 -4905116 + AT_rich Low_complexity Low_complexity 1 23 0 8 723 251 158 16 66 chr2L 18111376 18111437 -4900107 + DNAREP1_DM LINE Penelope 532 589 -5 8 723 4907 34 44 0 chr2L 18113588 18114199 -4897345 + TC1_DM DNA Tc1 1 638 -1028 8 723 243 133 0 0 chr2L 18120411 18120456 -4891088 + (CTG)n Simple_repeat Simple_repeat 1 45 0 8 723 306 125 0 0 chr2L 18120502 18120550 -4890994 + (CTA)n Simple_repeat Simple_repeat 3 50 0 8 723 23 33 0 0 chr2L 18122235 18122265 -4889279 + AT_rich Low_complexity Low_complexity 1 30 0 8 723 22 56 0 0 chr2L 18124052 18124088 -4887456 + AT_rich Low_complexity Low_complexity 1 36 0 8 723 236 173 77 0 chr2L 18125545 18125597 -4885947 + DNAREP1_DM LINE Penelope 1 56 -538 8 723 21 0 0 0 chr2L 18126271 18126292 -4885252 + AT_rich Low_complexity Low_complexity 1 21 0 8 723 27 0 0 0 chr2L 18128262 18128289 -4883255 + AT_rich Low_complexity Low_complexity 1 27 0 8 723 201 132 0 0 chr2L 18133109 18133147 -4878397 + (TTG)n Simple_repeat Simple_repeat 3 40 0 8 723 186 189 0 0 chr2L 18133281 18133318 -4878226 + (TTG)n Simple_repeat Simple_repeat 1 37 0 8 723 22 0 0 0 chr2L 18135214 18135236 -4876308 + AT_rich Low_complexity Low_complexity 1 22 0 8 723 213 167 18 18 chr2L 18137667 18137722 -4873822 + (CTG)n Simple_repeat Simple_repeat 3 57 0 8 723 224 122 0 24 chr2L 18137824 18137866 -4873678 + (TTG)n Simple_repeat Simple_repeat 1 41 0 8 723 24 0 0 0 chr2L 18138337 18138361 -4873183 + AT_rich Low_complexity Low_complexity 1 24 0 8 723 23 33 0 0 chr2L 18138473 18138503 -4873041 + AT_rich Low_complexity Low_complexity 1 30 0 8 723 248 167 0 14 chr2L 18141835 18141908 -4869636 + (CTG)n Simple_repeat Simple_repeat 3 74 0 8 723 21 36 0 0 chr2L 18146927 18146955 -4864589 + AT_rich Low_complexity Low_complexity 1 28 0 8 723 21 36 0 0 chr2L 18149148 18149176 -4862368 + AT_rich Low_complexity Low_complexity 1 28 0 8 723 40 67 0 0 chr2L 18149385 18149460 -4862084 + AT_rich Low_complexity Low_complexity 1 75 0 8 723 243 61 0 0 chr2L 18150379 18150412 -4861132 + (CATA)n Simple_repeat Simple_repeat 4 36 0 8 723 47 19 0 0 chr2L 18150848 18150902 -4860642 + AT_rich Low_complexity Low_complexity 1 54 0 8 723 237 33 0 0 chr2L 18151514 18151544 -4860000 + (CAA)n Simple_repeat Simple_repeat 2 31 0 8 723 192 77 0 0 chr2L 18151610 18151636 -4859908 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 723 26 30 0 0 chr2L 18152891 18152924 -4858620 + AT_rich Low_complexity Low_complexity 1 33 0 8 723 25 0 0 0 chr2L 18153176 18153201 -4858343 + AT_rich Low_complexity Low_complexity 1 25 0 8 723 2116 109 94 26 chr2L 18159140 18159723 -4851821 - DNAREP1_DM LINE Penelope -96 498 2 8 723 21 0 0 0 chr2L 18162130 18162151 -4849393 + AT_rich Low_complexity Low_complexity 1 21 0 8 723 180 0 0 0 chr2L 18163809 18163829 -4847715 + (TA)n Simple_repeat Simple_repeat 2 21 0 8 723 21 0 0 0 chr2L 18164722 18164743 -4846801 + AT_rich Low_complexity Low_complexity 1 21 0 8 723 24 53 0 0 chr2L 18167530 18167568 -4843976 + AT_rich Low_complexity Low_complexity 1 38 0 8 723 33 25 0 0 chr2L 18172146 18172186 -4839358 + AT_rich Low_complexity Low_complexity 1 40 0 8 723 24 0 0 0 chr2L 18176861 18176885 -4834659 + AT_rich Low_complexity Low_complexity 1 24 0 8 723 652 118 291 27 chr2L 18177125 18177273 -4834271 + DNAREP1_DM LINE Penelope 403 589 -5 8 723 24 67 0 0 chr2L 18177589 18177634 -4833910 + AT_rich Low_complexity Low_complexity 1 45 0 8 723 21 0 0 0 chr2L 18178485 18178506 -4833038 + AT_rich Low_complexity Low_complexity 1 21 0 8 723 207 125 0 0 chr2L 18179427 18179467 -4832077 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 723 296 181 12 0 chr2L 18181452 18181535 -4830009 + (TA)n Simple_repeat Simple_repeat 2 85 0 8 723 225 83 0 0 chr2L 18184119 18184155 -4827389 + (CTG)n Simple_repeat Simple_repeat 1 36 0 8 723 27 0 0 0 chr2L 18189616 18189643 -4821901 + AT_rich Low_complexity Low_complexity 1 27 0 8 723 238 233 0 48 chr2L 18190274 18190337 -4821207 - BARI1 DNA Tc1 -1651 99 40 8 723 23 0 0 0 chr2L 18191238 18191261 -4820283 + AT_rich Low_complexity Low_complexity 1 23 0 8 723 21 0 0 0 chr2L 18193098 18193119 -4818425 + AT_rich Low_complexity Low_complexity 1 21 0 8 723 25 0 0 0 chr2L 18193660 18193685 -4817859 + AT_rich Low_complexity Low_complexity 1 25 0 8 723 23 78 0 0 chr2L 18197355 18197406 -4814138 + AT_rich Low_complexity Low_complexity 1 51 0 8 723 180 111 0 0 chr2L 18201518 18201545 -4809999 + (CAT)n Simple_repeat Simple_repeat 1 27 0 8 723 250 183 14 14 chr2L 18204177 18204249 -4807295 + (CTG)n Simple_repeat Simple_repeat 3 74 0 8 723 245 29 29 0 chr2L 18204803 18204837 -4806707 + (CTG)n Simple_repeat Simple_repeat 3 37 0 8 723 189 74 0 0 chr2L 18205658 18205685 -4805859 + (CAT)n Simple_repeat Simple_repeat 2 28 0 8 723 23 0 0 0 chr2L 18207581 18207604 -4803940 + AT_rich Low_complexity Low_complexity 1 23 0 8 723 26 0 0 0 chr2L 18210364 18210390 -4801154 + AT_rich Low_complexity Low_complexity 1 26 0 8 723 207 139 0 0 chr2L 18212168 18212204 -4799340 + (TA)n Simple_repeat Simple_repeat 1 36 0 8 723 23 0 0 0 chr2L 18216096 18216119 -4795425 + AT_rich Low_complexity Low_complexity 1 23 0 8 723 21 0 0 0 chr2L 18216181 18216202 -4795342 + AT_rich Low_complexity Low_complexity 1 21 0 8 723 26 0 0 0 chr2L 18217822 18217848 -4793696 + AT_rich Low_complexity Low_complexity 1 26 0 8 724 36 23 0 0 chr2L 18222753 18222796 -4788748 + AT_rich Low_complexity Low_complexity 1 43 0 8 724 22 35 0 0 chr2L 18229762 18229791 -4781753 + AT_rich Low_complexity Low_complexity 1 29 0 8 724 232 246 0 30 chr2L 18231280 18231347 -4780197 + (ATG)n Simple_repeat Simple_repeat 3 67 0 8 724 265 255 29 10 chr2L 18234768 18234871 -4776673 + ROO_I LTR Pao 626 730 -7526 8 724 30 45 0 0 chr2L 18237251 18237295 -4774249 + AT_rich Low_complexity Low_complexity 1 44 0 8 724 22 0 0 0 chr2L 18241260 18241282 -4770262 + AT_rich Low_complexity Low_complexity 1 22 0 8 724 22 0 0 0 chr2L 18243436 18243458 -4768086 + AT_rich Low_complexity Low_complexity 1 22 0 8 724 22 0 0 0 chr2L 18245186 18245208 -4766336 + AT_rich Low_complexity Low_complexity 1 22 0 8 724 30 27 0 0 chr2L 18252681 18252718 -4758826 + AT_rich Low_complexity Low_complexity 1 37 0 8 724 185 65 32 0 chr2L 18252768 18252799 -4758745 + (TTTTTA)n Simple_repeat Simple_repeat 5 36 0 8 724 27 0 0 0 chr2L 18254768 18254795 -4756749 + AT_rich Low_complexity Low_complexity 1 27 0 8 724 489 82 543 25 chr2L 18255993 18256168 -4755376 - DMRP1 Unknown Unknown -61 285 20 8 724 21 0 0 0 chr2L 18265173 18265194 -4746350 + AT_rich Low_complexity Low_complexity 1 21 0 8 724 22 80 0 0 chr2L 18268557 18268607 -4742937 + AT_rich Low_complexity Low_complexity 1 50 0 8 724 24 0 0 0 chr2L 18273458 18273482 -4738062 + AT_rich Low_complexity Low_complexity 1 24 0 8 724 207 69 0 0 chr2L 18276634 18276663 -4734881 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 724 257 89 22 0 chr2L 18276993 18277038 -4734506 + (CACTC)n Simple_repeat Simple_repeat 3 48 0 8 724 31 0 0 0 chr2L 18278520 18278551 -4732993 + AT_rich Low_complexity Low_complexity 1 31 0 8 724 236 241 135 22 chr2L 18282947 18283036 -4728508 - DNAREP1_DM LINE Penelope -219 375 277 8 724 21 0 0 0 chr2L 18284123 18284144 -4727400 + AT_rich Low_complexity Low_complexity 1 21 0 8 724 42 57 0 0 chr2L 18286403 18286473 -4725071 + AT_rich Low_complexity Low_complexity 1 70 0 8 724 21 71 0 0 chr2L 18287904 18287946 -4723598 + AT_rich Low_complexity Low_complexity 1 42 0 8 724 25 0 0 0 chr2L 18292304 18292329 -4719215 + AT_rich Low_complexity Low_complexity 1 25 0 8 724 28 29 0 0 chr2L 18292714 18292749 -4718795 + AT_rich Low_complexity Low_complexity 1 35 0 8 724 27 29 0 0 chr2L 18293959 18293993 -4717551 + AT_rich Low_complexity Low_complexity 1 34 0 8 724 21 71 0 0 chr2L 18297312 18297354 -4714190 + AT_rich Low_complexity Low_complexity 1 42 0 8 724 38 61 0 0 chr2L 18297519 18297585 -4713959 + AT_rich Low_complexity Low_complexity 1 66 0 8 724 334 123 260 0 chr2L 18299383 18299456 -4712088 - DNAREP1_DM LINE Penelope 0 594 503 8 724 21 36 0 0 chr2L 18304084 18304112 -4707432 + AT_rich Low_complexity Low_complexity 1 28 0 8 724 30 83 0 0 chr2L 18305108 18305180 -4706364 + AT_rich Low_complexity Low_complexity 1 72 0 8 724 183 42 0 0 chr2L 18307627 18307651 -4703893 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 8 724 301 143 0 0 chr2L 18309901 18309957 -4701587 - DNAREP1_DM LINE Penelope 0 594 539 8 724 25 51 0 0 chr2L 18310604 18310643 -4700901 + AT_rich Low_complexity Low_complexity 1 39 0 8 724 46 19 0 0 chr2L 18311514 18311567 -4699977 + AT_rich Low_complexity Low_complexity 1 53 0 8 724 28 0 0 0 chr2L 18313299 18313327 -4698217 + AT_rich Low_complexity Low_complexity 1 28 0 8 724 30 93 0 0 chr2L 18315618 18315704 -4695840 + AT_rich Low_complexity Low_complexity 1 86 0 8 724 23 0 0 0 chr2L 18317005 18317028 -4694516 + AT_rich Low_complexity Low_complexity 1 23 0 8 724 26 30 0 0 chr2L 18318043 18318076 -4693468 + AT_rich Low_complexity Low_complexity 1 33 0 8 724 195 139 0 0 chr2L 18318974 18319010 -4692534 + (CAA)n Simple_repeat Simple_repeat 1 36 0 8 724 26 30 0 0 chr2L 18319731 18319764 -4691780 + AT_rich Low_complexity Low_complexity 1 33 0 8 724 21 0 0 0 chr2L 18322654 18322675 -4688869 + AT_rich Low_complexity Low_complexity 1 21 0 8 724 23 33 0 0 chr2L 18323742 18323772 -4687772 + AT_rich Low_complexity Low_complexity 1 30 0 8 724 215 312 0 31 chr2L 18327641 18327737 -4683807 + T-rich Low_complexity Low_complexity 3 95 0 8 724 26 0 0 0 chr2L 18329405 18329431 -4682113 + AT_rich Low_complexity Low_complexity 1 26 0 8 724 24 0 0 0 chr2L 18330288 18330312 -4681232 + AT_rich Low_complexity Low_complexity 1 24 0 8 724 281 328 6 28 chr2L 18331550 18331729 -4679815 + (CAG)n Simple_repeat Simple_repeat 2 176 0 8 724 22 35 0 0 chr2L 18334210 18334239 -4677305 + AT_rich Low_complexity Low_complexity 1 29 0 8 724 28 48 0 0 chr2L 18343041 18343083 -4668461 + AT_rich Low_complexity Low_complexity 1 42 0 8 724 214 192 68 14 chr2L 18343448 18343522 -4668022 + T-rich Low_complexity Low_complexity 1 78 0 8 724 222 196 0 0 chr2L 18344397 18344443 -4667101 + (CTG)n Simple_repeat Simple_repeat 3 48 0 8 725 24 0 0 0 chr2L 18352256 18352280 -4659264 + AT_rich Low_complexity Low_complexity 1 24 0 8 725 24 0 0 0 chr2L 18359233 18359257 -4652287 + AT_rich Low_complexity Low_complexity 1 24 0 8 725 213 275 0 28 chr2L 18359865 18359936 -4651608 + (CAG)n Simple_repeat Simple_repeat 2 70 0 8 725 226 200 0 0 chr2L 18361443 18361483 -4650061 + (CTG)n Simple_repeat Simple_repeat 3 42 0 8 725 24 32 0 0 chr2L 18362275 18362306 -4649238 + AT_rich Low_complexity Low_complexity 1 31 0 8 725 220 27 54 0 chr2L 18370045 18370082 -4641462 + (TTTAG)n Simple_repeat Simple_repeat 2 40 0 8 725 228 111 0 0 chr2L 18370620 18370656 -4640888 + (T)n Simple_repeat Simple_repeat 1 36 0 8 725 30 27 0 0 chr2L 18374723 18374760 -4636784 + AT_rich Low_complexity Low_complexity 1 37 0 8 725 22 35 0 0 chr2L 18380734 18380763 -4630781 + AT_rich Low_complexity Low_complexity 1 29 0 8 725 189 0 0 0 chr2L 18381701 18381722 -4629822 + (T)n Simple_repeat Simple_repeat 1 21 0 8 725 189 154 0 0 chr2L 18382143 18382182 -4629362 + (CAGT)n Simple_repeat Simple_repeat 4 42 0 8 725 22 35 0 0 chr2L 18385571 18385600 -4625944 + AT_rich Low_complexity Low_complexity 1 29 0 8 725 213 170 0 41 chr2L 18386062 18386111 -4625433 + CT-rich Low_complexity Low_complexity 2 48 0 8 725 216 194 48 0 chr2L 18388145 18388207 -4623337 + A-rich Low_complexity Low_complexity 6 70 0 8 725 31 0 0 0 chr2L 18389223 18389254 -4622290 + AT_rich Low_complexity Low_complexity 1 31 0 8 725 225 180 0 0 chr2L 18392298 18392348 -4619196 + (CAA)n Simple_repeat Simple_repeat 3 52 0 8 725 24 32 0 0 chr2L 18392853 18392884 -4618660 + AT_rich Low_complexity Low_complexity 1 31 0 8 725 180 0 0 0 chr2L 18393887 18393907 -4617637 + (CAGT)n Simple_repeat Simple_repeat 3 22 0 8 725 22 56 0 0 chr2L 18394343 18394379 -4617165 + AT_rich Low_complexity Low_complexity 1 36 0 8 725 22 0 0 0 chr2L 18400695 18400717 -4610827 + AT_rich Low_complexity Low_complexity 1 22 0 8 725 22 0 0 0 chr2L 18402029 18402051 -4609493 + AT_rich Low_complexity Low_complexity 1 22 0 8 725 24 32 0 0 chr2L 18402664 18402695 -4608849 + AT_rich Low_complexity Low_complexity 1 31 0 8 725 204 40 0 0 chr2L 18407073 18407098 -4604446 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 725 40867 1 0 0 chr2L 18408081 18412800 -4598744 + DOC LINE Jockey 7 4725 0 8 725 26 0 0 0 chr2L 18415626 18415652 -4595892 + AT_rich Low_complexity Low_complexity 1 26 0 8 725 216 67 0 0 chr2L 18416459 18416489 -4595055 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 725 41 21 0 0 chr2L 18417715 18417763 -4593781 + AT_rich Low_complexity Low_complexity 1 48 0 8 725 26 0 0 0 chr2L 18417964 18417990 -4593554 + AT_rich Low_complexity Low_complexity 1 26 0 8 725 25 0 0 0 chr2L 18419796 18419821 -4591723 + AT_rich Low_complexity Low_complexity 1 25 0 8 725 186 43 0 0 chr2L 18422128 18422151 -4589393 + (CAA)n Simple_repeat Simple_repeat 2 24 0 8 725 43 47 0 0 chr2L 18422669 18422733 -4588811 + AT_rich Low_complexity Low_complexity 1 64 0 8 725 27 49 0 0 chr2L 18425875 18425916 -4585628 + AT_rich Low_complexity Low_complexity 1 41 0 8 725 22 0 0 0 chr2L 18427289 18427311 -4584233 + AT_rich Low_complexity Low_complexity 1 22 0 8 725 28 0 0 0 chr2L 18427690 18427718 -4583826 + AT_rich Low_complexity Low_complexity 1 28 0 8 725 24 0 0 0 chr2L 18428470 18428494 -4583050 + AT_rich Low_complexity Low_complexity 1 24 0 8 725 180 152 0 0 chr2L 18429101 18429134 -4582410 + (TA)n Simple_repeat Simple_repeat 2 34 0 8 725 235 113 19 19 chr2L 18434314 18434368 -4577176 + (TTTAA)n Simple_repeat Simple_repeat 3 56 0 8 725 189 74 0 0 chr2L 18434889 18434916 -4576628 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 8 725 34 0 0 0 chr2L 18435413 18435447 -4576097 + AT_rich Low_complexity Low_complexity 1 34 0 8 725 21 0 0 0 chr2L 18436045 18436066 -4575478 + AT_rich Low_complexity Low_complexity 1 21 0 8 725 22 35 0 0 chr2L 18438713 18438742 -4572802 + AT_rich Low_complexity Low_complexity 1 29 0 8 725 186 103 0 0 chr2L 18440979 18441008 -4570536 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 725 29 78 0 0 chr2L 18443888 18443952 -4567592 + AT_rich Low_complexity Low_complexity 1 64 0 8 725 28 48 0 0 chr2L 18444002 18444044 -4567500 + AT_rich Low_complexity Low_complexity 1 42 0 8 725 372 206 0 52 chr2L 18444070 18444167 -4567377 - DNAREP1_DM LINE Penelope -140 454 363 8 725 297 253 138 23 chr2L 18444188 18444362 -4567182 - DNAREP1_DM LINE Penelope -282 312 119 8 725 295 246 8 8 chr2L 18445505 18445632 -4565912 + CT-rich Low_complexity Low_complexity 1 127 0 8 725 27 29 0 0 chr2L 18449087 18449121 -4562423 + AT_rich Low_complexity Low_complexity 1 34 0 8 725 25 31 0 0 chr2L 18453925 18453957 -4557587 + AT_rich Low_complexity Low_complexity 1 32 0 8 725 22 0 0 0 chr2L 18456004 18456026 -4555518 + AT_rich Low_complexity Low_complexity 1 22 0 8 725 225 0 0 0 chr2L 18456050 18456075 -4555469 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 725 192 158 0 0 chr2L 18456077 18456115 -4555429 + GA-rich Low_complexity Low_complexity 2 39 0 8 725 25 0 0 0 chr2L 18456447 18456472 -4555072 + AT_rich Low_complexity Low_complexity 1 25 0 8 725 213 236 0 18 chr2L 18457164 18457220 -4554324 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 725 29 0 0 0 chr2L 18457297 18457326 -4554218 + AT_rich Low_complexity Low_complexity 1 29 0 8 725 24 32 0 0 chr2L 18459470 18459501 -4552043 + AT_rich Low_complexity Low_complexity 1 31 0 8 725 26 30 0 0 chr2L 18465679 18465712 -4545832 + AT_rich Low_complexity Low_complexity 1 33 0 8 725 240 35 0 0 chr2L 18465843 18465872 -4545672 + (CTG)n Simple_repeat Simple_repeat 3 31 0 8 725 28 29 0 0 chr2L 18466544 18466579 -4544965 + AT_rich Low_complexity Low_complexity 1 35 0 8 725 40 94 0 0 chr2L 18468049 18468166 -4543378 + AT_rich Low_complexity Low_complexity 1 117 0 8 725 33 56 0 0 chr2L 18469283 18469337 -4542207 + AT_rich Low_complexity Low_complexity 1 54 0 8 725 23 92 0 0 chr2L 18470991 18471056 -4540488 + AT_rich Low_complexity Low_complexity 1 65 0 8 725 277 282 0 0 chr2L 18473631 18473702 -4537842 + DNAREP1_DM LINE Penelope 1 71 -523 8 725 701 212 69 73 chr2L 18473899 18474103 -4537441 + DNAREP1_DM LINE Penelope 391 593 -1 8 725 210 243 14 14 chr2L 18475888 18475959 -4535585 + (CTG)n Simple_repeat Simple_repeat 1 71 0 8 725 228 149 0 0 chr2L 18476104 18476151 -4535393 + (CTG)n Simple_repeat Simple_repeat 1 47 0 8 725 24 32 0 0 chr2L 18476736 18476767 -4534777 + AT_rich Low_complexity Low_complexity 1 31 0 8 725 23 54 0 0 chr2L 18477623 18477660 -4533884 + AT_rich Low_complexity Low_complexity 1 37 0 8 726 22 0 0 0 chr2L 18484692 18484714 -4526830 + AT_rich Low_complexity Low_complexity 1 22 0 8 726 25 0 0 0 chr2L 18484938 18484963 -4526581 + AT_rich Low_complexity Low_complexity 1 25 0 8 726 21 36 0 0 chr2L 18485523 18485551 -4525993 + AT_rich Low_complexity Low_complexity 1 28 0 8 726 22 56 0 0 chr2L 18493292 18493328 -4518216 + AT_rich Low_complexity Low_complexity 1 36 0 8 726 23 33 0 0 chr2L 18495481 18495511 -4516033 + AT_rich Low_complexity Low_complexity 1 30 0 8 726 31 0 0 0 chr2L 18496093 18496124 -4515420 + AT_rich Low_complexity Low_complexity 1 31 0 8 726 183 42 0 0 chr2L 18496559 18496583 -4514961 + (CAGT)n Simple_repeat Simple_repeat 3 26 0 8 726 25 0 0 0 chr2L 18499294 18499319 -4512225 + AT_rich Low_complexity Low_complexity 1 25 0 8 726 23 33 0 0 chr2L 18500254 18500284 -4511260 + AT_rich Low_complexity Low_complexity 1 30 0 8 726 282 56 0 0 chr2L 18501212 18501248 -4510296 + (ACTG)n Simple_repeat Simple_repeat 1 36 0 8 726 21 0 0 0 chr2L 18503223 18503244 -4508300 + AT_rich Low_complexity Low_complexity 1 21 0 9 726 26 50 0 0 chr2L 18503328 18503368 -4508176 + AT_rich Low_complexity Low_complexity 1 40 0 9 726 24 32 0 0 chr2L 18507840 18507871 -4503673 + AT_rich Low_complexity Low_complexity 1 31 0 9 726 27 29 0 0 chr2L 18508707 18508741 -4502803 + AT_rich Low_complexity Low_complexity 1 34 0 9 726 28 0 0 0 chr2L 18509855 18509883 -4501661 + AT_rich Low_complexity Low_complexity 1 28 0 9 726 22 35 0 0 chr2L 18510348 18510377 -4501167 + AT_rich Low_complexity Low_complexity 1 29 0 9 726 24 0 0 0 chr2L 18510754 18510778 -4500766 + AT_rich Low_complexity Low_complexity 1 24 0 9 726 38 39 0 0 chr2L 18513469 18513521 -4498023 + AT_rich Low_complexity Low_complexity 1 52 0 9 726 22 0 0 0 chr2L 18513567 18513589 -4497955 + AT_rich Low_complexity Low_complexity 1 22 0 9 726 23 68 0 0 chr2L 18513792 18513836 -4497708 + AT_rich Low_complexity Low_complexity 1 44 0 9 726 21 36 0 0 chr2L 18513962 18513990 -4497554 + AT_rich Low_complexity Low_complexity 1 28 0 9 726 22 35 0 0 chr2L 18514274 18514303 -4497241 + AT_rich Low_complexity Low_complexity 1 29 0 9 726 31 26 0 0 chr2L 18517694 18517732 -4493812 + AT_rich Low_complexity Low_complexity 1 38 0 9 726 22 56 0 0 chr2L 18517974 18518010 -4493534 + AT_rich Low_complexity Low_complexity 1 36 0 9 726 207 114 0 0 chr2L 18526159 18526194 -4485350 + (CAGT)n Simple_repeat Simple_repeat 4 38 0 9 726 22 0 0 0 chr2L 18528368 18528390 -4483154 + AT_rich Low_complexity Low_complexity 1 22 0 9 726 237 83 0 0 chr2L 18533399 18533435 -4478109 + (ATG)n Simple_repeat Simple_repeat 2 37 0 9 726 298 261 0 33 chr2L 18533620 18533711 -4477833 + (ATGGTG)n Simple_repeat Simple_repeat 2 89 0 9 726 35 24 0 0 chr2L 18535304 18535346 -4476198 + AT_rich Low_complexity Low_complexity 1 42 0 9 726 23 0 0 0 chr2L 18536241 18536264 -4475280 + AT_rich Low_complexity Low_complexity 1 23 0 9 726 30 27 0 0 chr2L 18542302 18542339 -4469205 + AT_rich Low_complexity Low_complexity 1 37 0 9 726 234 274 0 0 chr2L 18543362 18543435 -4468109 + (CTG)n Simple_repeat Simple_repeat 3 75 0 9 726 21 95 0 0 chr2L 18543910 18543973 -4467571 + AT_rich Low_complexity Low_complexity 1 63 0 9 726 207 0 0 0 chr2L 18544579 18544602 -4466942 + (TC)n Simple_repeat Simple_repeat 2 24 0 9 726 23 0 0 0 chr2L 18544865 18544888 -4466656 + AT_rich Low_complexity Low_complexity 1 23 0 9 726 275 140 34 23 chr2L 18546575 18546663 -4464881 - ROO_I LTR Pao -7523 733 645 9 726 21 0 0 0 chr2L 18548947 18548968 -4462576 + AT_rich Low_complexity Low_complexity 1 21 0 9 726 26 0 0 0 chr2L 18549585 18549611 -4461933 + AT_rich Low_complexity Low_complexity 1 26 0 9 726 21 0 0 0 chr2L 18550941 18550962 -4460582 + AT_rich Low_complexity Low_complexity 1 21 0 9 726 204 158 0 0 chr2L 18554063 18554101 -4457443 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 9 726 23 0 0 0 chr2L 18554954 18554977 -4456567 + AT_rich Low_complexity Low_complexity 1 23 0 9 726 208 186 0 23 chr2L 18557806 18557850 -4453694 + A-rich Low_complexity Low_complexity 2 44 0 9 726 210 198 21 75 chr2L 18559312 18559405 -4452139 + A-rich Low_complexity Low_complexity 2 89 0 9 726 23 33 0 0 chr2L 18563790 18563820 -4447724 + AT_rich Low_complexity Low_complexity 1 30 0 9 726 200 35 35 0 chr2L 18564234 18564263 -4447281 + (TAAAG)n Simple_repeat Simple_repeat 5 34 0 9 726 234 156 0 0 chr2L 18566550 18566595 -4444949 + (ATTTG)n Simple_repeat Simple_repeat 2 46 0 9 726 21 0 0 0 chr2L 18566849 18566870 -4444674 + AT_rich Low_complexity Low_complexity 1 21 0 9 726 204 226 0 0 chr2L 18567530 18567583 -4443961 + A-rich Low_complexity Low_complexity 1 53 0 9 726 234 0 0 0 chr2L 18575760 18575786 -4435758 + (CATTA)n Simple_repeat Simple_repeat 5 30 0 9 726 30 97 0 0 chr2L 18576524 18576617 -4434927 + AT_rich Low_complexity Low_complexity 1 93 0 9 726 25885 0 0 0 chr2L 18581420 18584216 -4427328 + DOC LINE Jockey 1930 4725 0 9 726 207 88 0 0 chr2L 18584643 18584677 -4426867 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 726 192 133 50 0 chr2L 18585874 18585934 -4425610 + (TA)n Simple_repeat Simple_repeat 1 63 0 9 726 256 235 0 0 chr2L 18593798 18593883 -4417661 + ROO_I LTR Pao 644 728 -7528 9 726 25 31 0 0 chr2L 18597646 18597678 -4413866 + AT_rich Low_complexity Low_complexity 1 32 0 9 726 22 35 0 0 chr2L 18601067 18601096 -4410448 + AT_rich Low_complexity Low_complexity 1 29 0 9 726 21 0 0 0 chr2L 18605445 18605466 -4406078 + AT_rich Low_complexity Low_complexity 1 21 0 9 726 21 36 0 0 chr2L 18605486 18605514 -4406030 + AT_rich Low_complexity Low_complexity 1 28 0 9 726 192 111 0 0 chr2L 18606649 18606685 -4404859 + (TTA)n Simple_repeat Simple_repeat 1 36 0 9 727 24 32 0 0 chr2L 18612485 18612516 -4399028 + AT_rich Low_complexity Low_complexity 1 31 0 9 727 1026 196 117 71 chr2L 18612637 18612945 -4398599 + DNAREP1_DM LINE Penelope 256 577 -17 9 727 200 211 0 19 chr2L 18613276 18613329 -4398215 + (CTG)n Simple_repeat Simple_repeat 1 52 0 9 727 23 54 0 0 chr2L 18614346 18614383 -4397161 + AT_rich Low_complexity Low_complexity 1 37 0 9 727 31 0 0 0 chr2L 18617040 18617071 -4394473 + AT_rich Low_complexity Low_complexity 1 31 0 9 727 29 0 0 0 chr2L 18623082 18623111 -4388433 + AT_rich Low_complexity Low_complexity 1 29 0 9 727 23 0 0 0 chr2L 18626448 18626471 -4385073 + AT_rich Low_complexity Low_complexity 1 23 0 9 727 22 35 0 0 chr2L 18628832 18628861 -4382683 + AT_rich Low_complexity Low_complexity 1 29 0 9 727 309 51 0 0 chr2L 18629284 18629323 -4382221 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 727 32 0 0 0 chr2L 18630237 18630269 -4381275 + AT_rich Low_complexity Low_complexity 1 32 0 9 727 23 33 0 0 chr2L 18630324 18630354 -4381190 + AT_rich Low_complexity Low_complexity 1 30 0 9 727 21 36 0 0 chr2L 18633622 18633650 -4377894 + AT_rich Low_complexity Low_complexity 1 28 0 9 727 43699 0 0 0 chr2L 18633667 18638390 -4373154 - DOC LINE Jockey 0 4725 3 9 727 186 43 0 0 chr2L 18642325 18642348 -4369196 + (CAAT)n Simple_repeat Simple_repeat 3 25 0 9 727 22 0 0 0 chr2L 18644578 18644600 -4366944 + AT_rich Low_complexity Low_complexity 1 22 0 9 727 219 288 0 15 chr2L 18648183 18648250 -4363294 + (TA)n Simple_repeat Simple_repeat 2 67 0 9 727 195 42 0 0 chr2L 18648689 18648713 -4362831 + (GA)n Simple_repeat Simple_repeat 2 25 0 9 727 180 111 0 0 chr2L 18651149 18651176 -4360368 + (CTTAG)n Simple_repeat Simple_repeat 4 30 0 9 727 219 233 0 0 chr2L 18653074 18653117 -4358427 + (ATG)n Simple_repeat Simple_repeat 1 43 0 9 727 243 157 0 0 chr2L 18654732 18654783 -4356761 + (CAG)n Simple_repeat Simple_repeat 3 53 0 9 727 23 0 0 0 chr2L 18658263 18658286 -4353258 + AT_rich Low_complexity Low_complexity 1 23 0 9 727 21 36 0 0 chr2L 18659693 18659721 -4351823 + AT_rich Low_complexity Low_complexity 1 28 0 9 727 21 36 0 0 chr2L 18661840 18661868 -4349676 + AT_rich Low_complexity Low_complexity 1 28 0 9 727 205 271 0 0 chr2L 18662267 18662315 -4349229 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 9 727 222 118 0 0 chr2L 18663932 18663966 -4347578 + (ATG)n Simple_repeat Simple_repeat 1 34 0 9 727 189 0 0 0 chr2L 18668138 18668159 -4343385 + (ATG)n Simple_repeat Simple_repeat 3 23 0 9 727 25 75 0 0 chr2L 18669805 18669858 -4341686 + AT_rich Low_complexity Low_complexity 1 53 0 9 727 267 93 0 0 chr2L 18675032 18675075 -4336469 + (T)n Simple_repeat Simple_repeat 1 43 0 9 727 23 0 0 0 chr2L 18684494 18684517 -4327027 + AT_rich Low_complexity Low_complexity 1 23 0 9 727 266 280 0 0 chr2L 18687249 18687324 -4324220 + (CAT)n Simple_repeat Simple_repeat 2 76 0 9 727 1543 67 36 11 chr2L 18688953 18689233 -4322311 + Gypsy6A_LTR LTR Gypsy 1 325 -95 9 727 25 51 0 0 chr2L 18696334 18696373 -4315171 + AT_rich Low_complexity Low_complexity 1 39 0 9 727 21 82 0 0 chr2L 18698571 18698620 -4312924 + AT_rich Low_complexity Low_complexity 1 49 0 9 727 22 0 0 0 chr2L 18703206 18703228 -4308316 + AT_rich Low_complexity Low_complexity 1 22 0 9 727 25 65 0 0 chr2L 18703277 18703323 -4308221 + AT_rich Low_complexity Low_complexity 1 46 0 9 727 22 56 0 0 chr2L 18705822 18705858 -4305686 + AT_rich Low_complexity Low_complexity 1 36 0 9 727 30 0 0 0 chr2L 18708665 18708695 -4302849 + AT_rich Low_complexity Low_complexity 1 30 0 9 727 21 0 0 0 chr2L 18713163 18713184 -4298360 + AT_rich Low_complexity Low_complexity 1 21 0 9 727 22 0 0 0 chr2L 18714583 18714605 -4296939 + AT_rich Low_complexity Low_complexity 1 22 0 9 727 333 131 0 0 chr2L 18715090 18715151 -4296393 + (CTG)n Simple_repeat Simple_repeat 3 63 0 9 727 207 0 0 0 chr2L 18715922 18715945 -4295599 + (TCC)n Simple_repeat Simple_repeat 1 23 0 9 727 262 148 56 0 chr2L 18718036 18718090 -4293454 + DOC3_DM LINE Jockey 517 573 -4167 9 727 244 241 0 0 chr2L 18718177 18718235 -4293309 + (TTG)n Simple_repeat Simple_repeat 1 58 0 9 727 228 67 0 0 chr2L 18718284 18718314 -4293230 + (GCTG)n Simple_repeat Simple_repeat 3 32 0 9 727 195 146 0 0 chr2L 18719202 18719243 -4292301 + (A)n Simple_repeat Simple_repeat 1 41 0 9 727 360 64 0 0 chr2L 18720485 18720532 -4291012 + (CAAA)n Simple_repeat Simple_repeat 4 50 0 9 727 203 176 0 0 chr2L 18721205 18721239 -4290305 + (ATG)n Simple_repeat Simple_repeat 1 34 0 9 727 438 94 0 0 chr2L 18721312 18721376 -4290168 + (CAG)n Simple_repeat Simple_repeat 3 66 0 9 727 234 269 0 0 chr2L 18721727 18721794 -4289750 + A-rich Low_complexity Low_complexity 2 68 0 9 727 183 218 0 0 chr2L 18722109 18722164 -4289380 + (CGGA)n Simple_repeat Simple_repeat 3 57 0 9 727 189 171 0 0 chr2L 18723383 18723418 -4288126 + (CATATA)n Simple_repeat Simple_repeat 3 37 0 9 727 205 238 0 0 chr2L 18724050 18724092 -4287452 + (TCCGG)n Simple_repeat Simple_repeat 3 44 0 9 727 255 250 16 39 chr2L 18724160 18724289 -4287255 + (CAA)n Simple_repeat Simple_repeat 3 128 0 9 727 198 118 0 0 chr2L 18726483 18726517 -4285027 + (TTG)n Simple_repeat Simple_repeat 1 34 0 9 727 23 0 0 0 chr2L 18726657 18726680 -4284864 + AT_rich Low_complexity Low_complexity 1 23 0 9 727 183 42 0 0 chr2L 18727366 18727390 -4284154 + (CCTA)n Simple_repeat Simple_repeat 4 27 0 9 727 237 132 0 0 chr2L 18728695 18728733 -4282811 + (CAT)n Simple_repeat Simple_repeat 3 40 0 9 727 198 0 0 0 chr2L 18729086 18729108 -4282436 + (CATTT)n Simple_repeat Simple_repeat 1 22 0 9 727 249 83 0 0 chr2L 18729790 18729826 -4281718 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 9 727 23 0 0 0 chr2L 18730317 18730340 -4281204 + AT_rich Low_complexity Low_complexity 1 23 0 9 727 189 0 0 0 chr2L 18733086 18733107 -4278437 + (CCCGAA)n Simple_repeat Simple_repeat 6 26 0 9 727 269 211 0 0 chr2L 18733737 18733794 -4277750 + ROO_I LTR Pao 675 731 -7525 9 727 190 194 0 29 chr2L 18733896 18733965 -4277579 + (CTG)n Simple_repeat Simple_repeat 1 67 0 9 727 26 0 0 0 chr2L 18736110 18736136 -4275408 + AT_rich Low_complexity Low_complexity 1 26 0 9 727 221 57 29 0 chr2L 18739239 18739274 -4272270 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 9 727 333 100 0 0 chr2L 18740860 18740910 -4270634 + (CTG)n Simple_repeat Simple_repeat 3 52 0 9 727 183 42 0 0 chr2L 18742329 18742353 -4269191 + (TATCG)n Simple_repeat Simple_repeat 2 25 0 9 727 209 176 19 19 chr2L 18742457 18742509 -4269035 + (TTG)n Simple_repeat Simple_repeat 2 53 0 9 728 211 177 16 16 chr2L 18743831 18743894 -4267650 + (CAA)n Simple_repeat Simple_repeat 3 65 0 9 728 258 32 0 0 chr2L 18744381 18744412 -4267132 + (CAGC)n Simple_repeat Simple_repeat 4 34 0 9 728 243 122 0 0 chr2L 18744467 18744516 -4267028 + (CAGT)n Simple_repeat Simple_repeat 2 50 0 9 728 252 130 0 0 chr2L 18747659 18747705 -4263839 + (TTG)n Simple_repeat Simple_repeat 1 46 0 9 728 210 118 0 0 chr2L 18749452 18749486 -4262058 + (TA)n Simple_repeat Simple_repeat 1 34 0 9 728 28 29 0 0 chr2L 18749878 18749913 -4261631 + AT_rich Low_complexity Low_complexity 1 35 0 9 728 216 135 0 0 chr2L 18750854 18750891 -4260653 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 9 728 31 0 0 0 chr2L 18751556 18751587 -4259957 + AT_rich Low_complexity Low_complexity 1 31 0 9 728 205 172 52 0 chr2L 18751886 18751944 -4259600 + (CA)n Simple_repeat Simple_repeat 1 61 0 9 728 294 260 0 13 chr2L 18756695 18756773 -4254771 + (CAA)n Simple_repeat Simple_repeat 1 77 0 9 728 192 125 0 0 chr2L 18762295 18762327 -4249217 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 9 728 189 0 0 0 chr2L 18762879 18762900 -4248644 + (TAA)n Simple_repeat Simple_repeat 3 23 0 9 728 289 250 11 32 chr2L 18763023 18763118 -4248426 + (TA)n Simple_repeat Simple_repeat 1 93 0 9 728 262 138 0 0 chr2L 18763523 18763581 -4247963 - ROO_I LTR Pao -7522 734 677 9 728 33 90 0 0 chr2L 18766528 18766617 -4244927 + AT_rich Low_complexity Low_complexity 1 89 0 9 728 22 0 0 0 chr2L 18767157 18767179 -4244365 + AT_rich Low_complexity Low_complexity 1 22 0 9 728 233 75 0 24 chr2L 18768509 18768550 -4242994 + (TGGA)n Simple_repeat Simple_repeat 3 42 0 9 728 225 94 0 0 chr2L 18769652 18769684 -4241860 + (TA)n Simple_repeat Simple_repeat 2 33 0 9 728 198 150 0 0 chr2L 18769867 18769907 -4241637 + (A)n Simple_repeat Simple_repeat 1 40 0 9 728 189 107 0 0 chr2L 18770632 18770660 -4240884 + (CAAGC)n Simple_repeat Simple_repeat 4 31 0 9 728 21 0 0 0 chr2L 18771050 18771071 -4240473 + AT_rich Low_complexity Low_complexity 1 21 0 9 728 234 0 0 0 chr2L 18771833 18771859 -4239685 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 728 31 44 0 0 chr2L 18773245 18773290 -4238254 + AT_rich Low_complexity Low_complexity 1 45 0 9 728 25 31 0 0 chr2L 18773897 18773929 -4237615 + AT_rich Low_complexity Low_complexity 1 32 0 9 728 23 0 0 0 chr2L 18776852 18776875 -4234669 + AT_rich Low_complexity Low_complexity 1 23 0 9 728 24 32 0 0 chr2L 18776899 18776930 -4234614 + AT_rich Low_complexity Low_complexity 1 31 0 9 728 264 172 0 0 chr2L 18777609 18777667 -4233877 + (TG)n Simple_repeat Simple_repeat 2 59 0 9 728 26 30 0 0 chr2L 18777770 18777803 -4233741 + AT_rich Low_complexity Low_complexity 1 33 0 9 728 180 0 0 0 chr2L 18779000 18779020 -4232524 + (ACTG)n Simple_repeat Simple_repeat 3 22 0 9 728 219 69 0 0 chr2L 18782952 18782981 -4228563 + (GA)n Simple_repeat Simple_repeat 1 29 0 9 728 180 0 0 0 chr2L 18783969 18783989 -4227555 + (TG)n Simple_repeat Simple_repeat 2 21 0 9 728 30 0 0 0 chr2L 18787229 18787259 -4224285 + AT_rich Low_complexity Low_complexity 1 30 0 9 728 22 0 0 0 chr2L 18787295 18787317 -4224227 + AT_rich Low_complexity Low_complexity 1 22 0 9 728 198 143 0 0 chr2L 18789030 18789065 -4222479 + (CGAAT)n Simple_repeat Simple_repeat 3 37 0 9 728 568 118 21 11 chr2L 18791369 18791463 -4220081 + DNAREP1_DM LINE Penelope 1 95 -499 9 728 991 155 456 29 chr2L 18791490 18791657 -4219887 + DNAREP1_DM LINE Penelope 193 430 -164 9 728 228 67 0 0 chr2L 18791657 18791687 -4219857 + (CGGA)n Simple_repeat Simple_repeat 4 33 0 9 728 991 139 107 15 chr2L 18791687 18791836 -4219708 + DNAREP1_DM LINE Penelope 431 594 0 9 728 316 219 65 19 chr2L 18795353 18795507 -4216037 + (TAAG)n Simple_repeat Simple_repeat 1 161 0 9 728 251 214 0 0 chr2L 18795936 18795992 -4215552 + (CA)n Simple_repeat Simple_repeat 2 57 0 9 728 253 117 67 0 chr2L 18796511 18796571 -4214973 - ROO_I LTR Pao -7512 744 681 9 728 203 292 0 15 chr2L 18797026 18797092 -4214452 + (CTG)n Simple_repeat Simple_repeat 3 67 0 9 728 195 139 0 0 chr2L 18801960 18801996 -4209548 + (AACTG)n Simple_repeat Simple_repeat 1 36 0 9 728 189 147 0 0 chr2L 18804239 18804273 -4207271 + (CCGAA)n Simple_repeat Simple_repeat 4 37 0 9 728 25 0 0 0 chr2L 18805411 18805436 -4206108 + AT_rich Low_complexity Low_complexity 1 25 0 9 728 34 24 0 0 chr2L 18806698 18806739 -4204805 + AT_rich Low_complexity Low_complexity 1 41 0 9 728 21 0 0 0 chr2L 18810727 18810748 -4200796 + AT_rich Low_complexity Low_complexity 1 21 0 9 728 26 74 0 0 chr2L 18818824 18818878 -4192666 + AT_rich Low_complexity Low_complexity 1 54 0 9 728 24 0 0 0 chr2L 18820199 18820223 -4191321 + AT_rich Low_complexity Low_complexity 1 24 0 9 728 26 0 0 0 chr2L 18823398 18823424 -4188120 + AT_rich Low_complexity Low_complexity 1 26 0 9 728 189 175 0 0 chr2L 18826695 18826735 -4184809 + (TATG)n Simple_repeat Simple_repeat 1 40 0 9 728 197 262 0 27 chr2L 18835545 18835655 -4175889 + CT-rich Low_complexity Low_complexity 2 108 0 9 728 216 279 0 0 chr2L 18838623 18838702 -4172842 + CT-rich Low_complexity Low_complexity 1 79 0 9 728 258 259 26 18 chr2L 18839077 18839191 -4172353 + (TTG)n Simple_repeat Simple_repeat 1 115 0 9 728 23 0 0 0 chr2L 18840874 18840897 -4170647 + AT_rich Low_complexity Low_complexity 1 23 0 9 728 282 106 0 0 chr2L 18845084 18845131 -4166413 + (TC)n Simple_repeat Simple_repeat 2 48 0 9 728 198 0 0 0 chr2L 18846262 18846284 -4165260 + (CA)n Simple_repeat Simple_repeat 1 22 0 9 728 205 186 0 0 chr2L 18848081 18848124 -4163420 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 728 21 57 0 0 chr2L 18850417 18850452 -4161092 + AT_rich Low_complexity Low_complexity 1 35 0 9 728 339 219 0 12 chr2L 18852433 18852516 -4159028 + DNAREP1_DM LINE Penelope 1 82 -512 9 728 584 175 175 93 chr2L 18852584 18852767 -4158777 + DNAREP1_DM LINE Penelope 397 594 0 9 728 245 135 19 0 chr2L 18852986 18853038 -4158506 + GA-rich Low_complexity Low_complexity 2 54 0 9 728 22 0 0 0 chr2L 18854771 18854793 -4156751 + AT_rich Low_complexity Low_complexity 1 22 0 9 728 237 65 0 0 chr2L 18858808 18858839 -4152705 + (CAA)n Simple_repeat Simple_repeat 1 31 0 9 728 27 29 0 0 chr2L 18859168 18859202 -4152342 + AT_rich Low_complexity Low_complexity 1 34 0 9 728 22 35 0 0 chr2L 18859594 18859623 -4151921 + AT_rich Low_complexity Low_complexity 1 29 0 9 728 23 0 0 0 chr2L 18859826 18859849 -4151695 + AT_rich Low_complexity Low_complexity 1 23 0 9 728 25 31 0 0 chr2L 18860054 18860086 -4151458 + AT_rich Low_complexity Low_complexity 1 32 0 9 728 249 263 0 0 chr2L 18864122 18864179 -4147365 + (TTG)n Simple_repeat Simple_repeat 2 58 0 9 728 21 36 0 0 chr2L 18864532 18864560 -4146984 + AT_rich Low_complexity Low_complexity 1 28 0 9 728 21 57 0 0 chr2L 18864626 18864661 -4146883 + AT_rich Low_complexity Low_complexity 1 35 0 9 728 342 61 0 0 chr2L 18866613 18866662 -4144882 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 728 41 0 0 0 chr2L 18867161 18867202 -4144342 + AT_rich Low_complexity Low_complexity 1 41 0 9 728 236 268 0 27 chr2L 18867437 18867510 -4144034 + (CGGA)n Simple_repeat Simple_repeat 1 71 0 9 728 221 240 0 0 chr2L 18867931 18867981 -4143563 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 728 21 0 0 0 chr2L 18868915 18868936 -4142608 + AT_rich Low_complexity Low_complexity 1 21 0 9 728 189 0 0 0 chr2L 18869224 18869245 -4142299 + (TC)n Simple_repeat Simple_repeat 2 22 0 9 728 348 125 0 0 chr2L 18871378 18871442 -4140102 + (CTG)n Simple_repeat Simple_repeat 2 65 0 9 728 232 234 0 0 chr2L 18871628 18871675 -4139869 + (CTG)n Simple_repeat Simple_repeat 1 47 0 9 728 25 0 0 0 chr2L 18873944 18873969 -4137575 + AT_rich Low_complexity Low_complexity 1 25 0 9 729 21 0 0 0 chr2L 18876512 18876533 -4135011 + AT_rich Low_complexity Low_complexity 1 21 0 9 729 210 139 0 0 chr2L 18881300 18881336 -4130208 + (CAGC)n Simple_repeat Simple_repeat 3 38 0 9 729 23 54 0 0 chr2L 18884436 18884473 -4127071 + AT_rich Low_complexity Low_complexity 1 37 0 9 729 22 35 0 0 chr2L 18884519 18884548 -4126996 + AT_rich Low_complexity Low_complexity 1 29 0 9 729 187 130 0 36 chr2L 18884808 18884864 -4126680 + (CGGAG)n Simple_repeat Simple_repeat 4 57 0 9 729 278 127 0 60 chr2L 18885065 18885132 -4126412 + (CAGT)n Simple_repeat Simple_repeat 1 63 0 9 729 218 271 0 0 chr2L 18885778 18885837 -4125707 + (TTG)n Simple_repeat Simple_repeat 2 60 0 9 729 207 0 0 0 chr2L 18885843 18885866 -4125678 + (CAG)n Simple_repeat Simple_repeat 3 25 0 9 729 186 43 0 0 chr2L 18885970 18885993 -4125551 + (TCTA)n Simple_repeat Simple_repeat 3 25 0 9 729 192 111 0 0 chr2L 18886136 18886172 -4125372 + (CCAA)n Simple_repeat Simple_repeat 4 39 0 9 729 203 171 0 0 chr2L 18886871 18886912 -4124632 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 729 219 88 0 0 chr2L 18887248 18887282 -4124262 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 729 22 35 0 0 chr2L 18887483 18887512 -4124032 + AT_rich Low_complexity Low_complexity 1 29 0 9 729 27 29 0 0 chr2L 18887603 18887637 -4123907 + AT_rich Low_complexity Low_complexity 1 34 0 9 729 239 314 0 14 chr2L 18887895 18887966 -4123578 + (CTG)n Simple_repeat Simple_repeat 1 70 0 9 729 21 0 0 0 chr2L 18889488 18889509 -4122035 + AT_rich Low_complexity Low_complexity 1 21 0 9 729 22 0 0 0 chr2L 18891086 18891108 -4120436 + AT_rich Low_complexity Low_complexity 1 22 0 9 729 27 0 0 0 chr2L 18897064 18897091 -4114453 + AT_rich Low_complexity Low_complexity 1 27 0 9 729 270 56 0 0 chr2L 18898217 18898253 -4113291 + (TCCA)n Simple_repeat Simple_repeat 2 37 0 9 729 219 146 0 0 chr2L 18899014 18899055 -4112489 + (T)n Simple_repeat Simple_repeat 1 41 0 9 729 368 67 0 0 chr2L 18902810 18902855 -4108689 - DNAREP1_DM LINE Penelope -532 62 18 9 729 252 0 0 0 chr2L 18903359 18903387 -4108157 + (CA)n Simple_repeat Simple_repeat 1 28 0 9 729 23 0 0 0 chr2L 18906820 18906843 -4104701 + AT_rich Low_complexity Low_complexity 1 23 0 9 729 183 42 0 0 chr2L 18908864 18908888 -4102656 + (GATTG)n Simple_repeat Simple_repeat 4 27 0 9 729 22 0 0 0 chr2L 18909774 18909796 -4101748 + AT_rich Low_complexity Low_complexity 1 22 0 9 729 25 0 0 0 chr2L 18910137 18910162 -4101382 + AT_rich Low_complexity Low_complexity 1 25 0 9 729 208 139 0 0 chr2L 18911339 18911375 -4100169 + (ACTG)n Simple_repeat Simple_repeat 2 37 0 9 729 31 44 0 0 chr2L 18913375 18913420 -4098124 + AT_rich Low_complexity Low_complexity 1 45 0 9 729 235 96 0 37 chr2L 18914950 18915004 -4096540 + (TGGA)n Simple_repeat Simple_repeat 4 55 0 9 729 180 77 0 0 chr2L 18916498 18916524 -4095020 + (T)n Simple_repeat Simple_repeat 1 26 0 9 729 198 0 0 0 chr2L 18917996 18918018 -4093526 + (GA)n Simple_repeat Simple_repeat 2 23 0 9 729 189 121 0 0 chr2L 18918215 18918248 -4093296 + (ATG)n Simple_repeat Simple_repeat 3 35 0 9 729 21 0 0 0 chr2L 18919583 18919604 -4091940 + AT_rich Low_complexity Low_complexity 1 21 0 9 729 200 222 0 0 chr2L 18920020 18920065 -4091479 + A-rich Low_complexity Low_complexity 1 45 0 9 729 210 37 0 0 chr2L 18921831 18921858 -4089686 + (CA)n Simple_repeat Simple_repeat 1 27 0 9 729 273 155 0 0 chr2L 18923070 18923128 -4088416 + (TG)n Simple_repeat Simple_repeat 2 59 0 9 729 185 94 31 0 chr2L 18925614 18925646 -4085898 + (CAT)n Simple_repeat Simple_repeat 1 33 0 9 729 21 0 0 0 chr2L 18928397 18928418 -4083126 + AT_rich Low_complexity Low_complexity 1 21 0 9 729 21 36 0 0 chr2L 18928911 18928939 -4082605 + AT_rich Low_complexity Low_complexity 1 28 0 9 729 273 240 98 30 chr2L 18931759 18931892 -4079652 + DNAREP1_DM LINE Penelope 368 509 -85 9 729 251 250 0 0 chr2L 18933832 18933892 -4077652 + (TTCGGG)n Simple_repeat Simple_repeat 4 63 0 9 729 204 305 19 9 chr2L 18935279 18935385 -4076159 + A-rich Low_complexity Low_complexity 6 112 0 9 729 30 27 0 0 chr2L 18936136 18936173 -4075371 + AT_rich Low_complexity Low_complexity 1 37 0 9 729 21 36 0 0 chr2L 18937235 18937263 -4074281 + AT_rich Low_complexity Low_complexity 1 28 0 9 729 34 104 0 0 chr2L 18937386 18937511 -4074033 + AT_rich Low_complexity Low_complexity 1 125 0 9 729 30 0 0 0 chr2L 18938041 18938071 -4073473 + AT_rich Low_complexity Low_complexity 1 30 0 9 729 215 186 0 23 chr2L 18944878 18944922 -4066622 + (TTTG)n Simple_repeat Simple_repeat 3 45 0 9 729 435 182 127 0 chr2L 18945493 18945603 -4065941 + DNAREP1_DM LINE Penelope 1 124 -470 9 729 48 53 0 0 chr2L 18947054 18947130 -4064414 + AT_rich Low_complexity Low_complexity 1 76 0 9 729 213 94 0 0 chr2L 18947298 18947330 -4064214 + (A)n Simple_repeat Simple_repeat 1 32 0 9 729 23 54 0 0 chr2L 18948710 18948747 -4062797 + AT_rich Low_complexity Low_complexity 1 37 0 9 729 31 0 0 0 chr2L 18954091 18954122 -4057422 + AT_rich Low_complexity Low_complexity 1 31 0 9 729 29 0 0 0 chr2L 18954499 18954528 -4057016 + AT_rich Low_complexity Low_complexity 1 29 0 9 729 246 32 0 0 chr2L 18955029 18955060 -4056484 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 9 729 26 0 0 0 chr2L 18957358 18957384 -4054160 + AT_rich Low_complexity Low_complexity 1 26 0 9 729 22 88 0 0 chr2L 18966308 18966365 -4045179 + AT_rich Low_complexity Low_complexity 1 57 0 9 729 202 286 13 13 chr2L 18966574 18966652 -4044892 + (CAA)n Simple_repeat Simple_repeat 1 78 0 9 729 29 47 0 0 chr2L 18967033 18967076 -4044468 + AT_rich Low_complexity Low_complexity 1 43 0 9 729 211 150 25 0 chr2L 18968457 18968497 -4043047 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 729 390 153 8 162 chr2L 18973582 18973699 -4037845 - DNAREP1_DM LINE Penelope -112 482 384 9 729 26 30 0 0 chr2L 18974412 18974445 -4037099 + AT_rich Low_complexity Low_complexity 1 33 0 9 729 25 51 0 0 chr2L 18977512 18977551 -4033993 + AT_rich Low_complexity Low_complexity 1 39 0 9 729 189 0 0 0 chr2L 18980884 18980905 -4030639 + (TTG)n Simple_repeat Simple_repeat 3 23 0 9 729 25 65 0 0 chr2L 18987518 18987564 -4023980 + AT_rich Low_complexity Low_complexity 1 46 0 9 729 23 54 0 0 chr2L 18987609 18987646 -4023898 + AT_rich Low_complexity Low_complexity 1 37 0 9 729 249 221 79 34 chr2L 18995139 18995228 -4016316 - DNAREP1_DM LINE Penelope -200 394 302 9 729 287 276 29 39 chr2L 18995236 18995338 -4016206 - DNAREP1_DM LINE Penelope -486 108 8 9 729 306 106 0 0 chr2L 18996048 18996095 -4015449 + (TA)n Simple_repeat Simple_repeat 1 47 0 9 729 238 200 235 12 chr2L 18996818 18996899 -4014645 + DNAREP1_DM LINE Penelope 496 594 0 9 729 25 0 0 0 chr2L 18997149 18997174 -4014370 + AT_rich Low_complexity Low_complexity 1 25 0 9 729 270 174 87 0 chr2L 18997599 18997645 -4013899 - DNAREP1_DM LINE Penelope -137 457 408 9 729 317 203 0 0 chr2L 18997785 18997844 -4013700 - DNAREP1_DM LINE Penelope -535 59 1 9 729 21 0 0 0 chr2L 19002869 19002890 -4008654 + AT_rich Low_complexity Low_complexity 1 21 0 9 729 31 92 0 0 chr2L 19003021 19003108 -4008436 + AT_rich Low_complexity Low_complexity 1 87 0 9 730 267 79 0 0 chr2L 19012256 19012294 -3999250 + (CGAGT)n Simple_repeat Simple_repeat 5 42 0 9 730 186 43 0 0 chr2L 19014006 19014029 -3997515 + (CGA)n Simple_repeat Simple_repeat 2 24 0 9 730 25 31 0 0 chr2L 19014846 19014878 -3996666 + AT_rich Low_complexity Low_complexity 1 32 0 9 730 183 80 0 0 chr2L 19015385 19015410 -3996134 + (CGAGG)n Simple_repeat Simple_repeat 1 25 0 9 730 183 80 0 0 chr2L 19019879 19019904 -3991640 + (T)n Simple_repeat Simple_repeat 1 25 0 9 730 227 140 0 50 chr2L 19021613 19021673 -3989871 + (CATGC)n Simple_repeat Simple_repeat 5 61 0 9 730 24 32 0 0 chr2L 19022014 19022045 -3989499 + AT_rich Low_complexity Low_complexity 1 31 0 9 730 331 272 56 75 chr2L 19022235 19022659 -3988885 - M4DM DNA Transib 0 1435 1020 9 730 1024 170 117 19 chr2L 19022659 19022989 -3988555 + DNAREP1_DM LINE Penelope 1 332 -262 9 730 24 32 0 0 chr2L 19023644 19023675 -3987869 + AT_rich Low_complexity Low_complexity 1 31 0 9 730 210 218 36 18 chr2L 19026657 19026713 -3984831 + (CCCA)n Simple_repeat Simple_repeat 3 59 0 9 730 207 0 0 0 chr2L 19027159 19027182 -3984362 + (TG)n Simple_repeat Simple_repeat 1 23 0 9 730 309 155 0 0 chr2L 19027533 19027591 -3983953 + (TTG)n Simple_repeat Simple_repeat 2 59 0 9 730 192 125 0 0 chr2L 19027660 19027692 -3983852 + (CAG)n Simple_repeat Simple_repeat 1 32 0 9 730 26 74 0 0 chr2L 19028397 19028451 -3983093 + AT_rich Low_complexity Low_complexity 1 54 0 9 730 36 53 0 0 chr2L 19033587 19033644 -3977900 + AT_rich Low_complexity Low_complexity 1 57 0 9 730 26 0 0 0 chr2L 19033709 19033735 -3977809 + AT_rich Low_complexity Low_complexity 1 26 0 9 730 21 36 0 0 chr2L 19041453 19041481 -3970063 + AT_rich Low_complexity Low_complexity 1 28 0 9 730 347 336 0 0 chr2L 19042134 19042283 -3969261 + (CACCAT)n Simple_repeat Simple_repeat 1 149 0 9 730 203 103 0 25 chr2L 19048390 19048430 -3963114 + (TA)n Simple_repeat Simple_repeat 1 39 0 9 730 25 75 0 0 chr2L 19048618 19048671 -3962873 + AT_rich Low_complexity Low_complexity 1 53 0 9 730 25 51 0 0 chr2L 19048856 19048895 -3962649 + AT_rich Low_complexity Low_complexity 1 39 0 9 730 224 200 30 30 chr2L 19051496 19051563 -3959981 + T-rich Low_complexity Low_complexity 5 71 0 9 730 201 174 0 21 chr2L 19058030 19058077 -3953467 + (CGTAA)n Simple_repeat Simple_repeat 1 46 0 9 730 259 85 43 0 chr2L 19058348 19058395 -3953149 + (TA)n Simple_repeat Simple_repeat 2 50 0 9 730 336 216 45 0 chr2L 19060185 19060273 -3951271 + DNAREP1_DM LINE Penelope 355 446 -148 9 730 225 217 100 0 chr2L 19060654 19060714 -3950830 - G2_DM LINE Jockey -2099 1003 938 9 730 28 48 0 0 chr2L 19064789 19064831 -3946713 + AT_rich Low_complexity Low_complexity 1 42 0 9 730 21 57 0 0 chr2L 19069235 19069270 -3942274 + AT_rich Low_complexity Low_complexity 1 35 0 9 730 44 75 0 0 chr2L 19069346 19069439 -3942105 + AT_rich Low_complexity Low_complexity 1 93 0 9 730 2284 112 136 59 chr2L 19076147 19076656 -3934888 - DNAREP1_DM LINE Penelope -97 497 2 9 730 380 167 367 6 chr2L 19076709 19076890 -3934654 + DNAREP1_DM LINE Penelope 2 246 -348 9 730 186 256 0 0 chr2L 19079988 19080066 -3931478 + (CTG)n Simple_repeat Simple_repeat 3 80 0 9 730 216 245 0 0 chr2L 19080084 19080137 -3931407 + (CTG)n Simple_repeat Simple_repeat 1 53 0 9 730 225 180 0 0 chr2L 19080274 19080324 -3931220 + (TTG)n Simple_repeat Simple_repeat 1 50 0 9 730 226 167 24 0 chr2L 19083680 19083722 -3927822 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 730 23 0 0 0 chr2L 19084576 19084599 -3926945 + AT_rich Low_complexity Low_complexity 1 23 0 9 730 192 184 0 0 chr2L 19089080 19089129 -3922415 + (CAGT)n Simple_repeat Simple_repeat 4 52 0 9 730 203 179 0 0 chr2L 19089188 19089227 -3922317 + (CCCA)n Simple_repeat Simple_repeat 2 40 0 9 730 32 75 0 0 chr2L 19089782 19089849 -3921695 + AT_rich Low_complexity Low_complexity 1 67 0 9 730 234 176 0 0 chr2L 19092944 19092995 -3918549 + T-rich Low_complexity Low_complexity 1 51 0 9 730 243 79 0 0 chr2L 19093849 19093887 -3917657 + (GTATG)n Simple_repeat Simple_repeat 5 42 0 9 730 216 67 0 0 chr2L 19100170 19100200 -3911344 + (TA)n Simple_repeat Simple_repeat 1 30 0 9 730 22 35 0 0 chr2L 19100558 19100587 -3910957 + AT_rich Low_complexity Low_complexity 1 29 0 9 730 228 67 0 0 chr2L 19103222 19103252 -3908292 + (GGAA)n Simple_repeat Simple_repeat 1 30 0 9 730 204 200 0 0 chr2L 19103574 19103614 -3907930 + C-rich Low_complexity Low_complexity 3 42 0 9 730 21 0 0 0 chr2L 19104181 19104202 -3907342 + AT_rich Low_complexity Low_complexity 1 21 0 9 730 267 93 0 0 chr2L 19104713 19104756 -3906788 + (ACTCG)n Simple_repeat Simple_repeat 2 44 0 9 730 186 43 0 0 chr2L 19105871 19105894 -3905650 + (CTG)n Simple_repeat Simple_repeat 1 23 0 9 730 326 245 0 0 chr2L 19105940 19106038 -3905506 + (CTG)n Simple_repeat Simple_repeat 1 98 0 9 730 215 226 19 0 chr2L 19106001 19106054 -3905490 + (TGG)n Simple_repeat Simple_repeat 2 55 0 9 730 21 36 0 0 chr2L 19106998 19107026 -3904518 + AT_rich Low_complexity Low_complexity 1 28 0 9 730 219 36 0 0 chr2L 19107891 19107919 -3903625 + (T)n Simple_repeat Simple_repeat 1 28 0 9 730 210 37 0 0 chr2L 19112337 19112364 -3899180 + (CTG)n Simple_repeat Simple_repeat 1 27 0 9 730 22 35 0 0 chr2L 19112665 19112694 -3898850 + AT_rich Low_complexity Low_complexity 1 29 0 9 730 27 29 0 0 chr2L 19120530 19120564 -3890980 + AT_rich Low_complexity Low_complexity 1 34 0 9 730 415 186 0 0 chr2L 19121239 19121309 -3890235 + DNAREP1_DM LINE Penelope 401 470 -124 9 730 216 115 47 47 chr2L 19127042 19127106 -3884438 + (TTATA)n Simple_repeat Simple_repeat 1 64 0 9 730 227 276 0 0 chr2L 19129190 19129248 -3882296 - MICROPIA_I LTR Gypsy -701 3775 3718 9 730 31 0 0 0 chr2L 19134787 19134818 -3876726 + AT_rich Low_complexity Low_complexity 1 31 0 9 730 183 129 0 0 chr2L 19135660 19135691 -3875853 + (CATA)n Simple_repeat Simple_repeat 2 32 0 9 731 233 184 20 20 chr2L 19137248 19137298 -3874246 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 9 731 207 0 0 0 chr2L 19137787 19137810 -3873734 + (TG)n Simple_repeat Simple_repeat 1 23 0 9 731 215 139 28 0 chr2L 19137906 19137942 -3873602 + (CATTT)n Simple_repeat Simple_repeat 3 39 0 9 731 253 233 0 27 chr2L 19138721 19138796 -3872748 + (CGTG)n Simple_repeat Simple_repeat 3 75 0 9 731 201 147 0 0 chr2L 19138928 19138962 -3872582 + (CAAAC)n Simple_repeat Simple_repeat 5 38 0 9 731 219 114 0 0 chr2L 19142289 19142324 -3869220 + (CAA)n Simple_repeat Simple_repeat 1 35 0 9 731 21 57 0 0 chr2L 19142600 19142635 -3868909 + AT_rich Low_complexity Low_complexity 1 35 0 9 731 215 200 50 0 chr2L 19144123 19144183 -3867361 + (CATA)n Simple_repeat Simple_repeat 1 63 0 9 731 28 0 0 0 chr2L 19144357 19144385 -3867159 + AT_rich Low_complexity Low_complexity 1 28 0 9 731 429 20 0 0 chr2L 19145218 19145268 -3866276 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 731 201 39 0 0 chr2L 19146223 19146249 -3865295 + (GA)n Simple_repeat Simple_repeat 1 26 0 9 731 3605 5 7 7 chr2L 19147424 19147838 -3863706 + DM297_LTR LTR Gypsy 1 414 0 9 731 54111 7 3 0 chr2L 19147838 19153988 -3857556 + DM297_I LTR Gypsy 1 6167 0 9 731 3605 5 7 7 chr2L 19153988 19154402 -3857142 + DM297_LTR LTR Gypsy 1 414 0 9 731 180 77 0 0 chr2L 19155357 19155383 -3856161 + (CGGT)n Simple_repeat Simple_repeat 2 27 0 9 731 189 74 0 0 chr2L 19157185 19157212 -3854332 + (TTTCC)n Simple_repeat Simple_repeat 1 27 0 9 731 21 57 0 0 chr2L 19157529 19157564 -3853980 + AT_rich Low_complexity Low_complexity 1 35 0 9 731 225 264 0 0 chr2L 19159684 19159737 -3851807 + (TTG)n Simple_repeat Simple_repeat 1 53 0 9 731 231 192 19 19 chr2L 19161534 19161587 -3849957 + A-rich Low_complexity Low_complexity 3 55 0 9 731 22 0 0 0 chr2L 19162846 19162868 -3848676 + AT_rich Low_complexity Low_complexity 1 22 0 9 731 24 67 0 0 chr2L 19164284 19164329 -3847215 + AT_rich Low_complexity Low_complexity 1 45 0 9 731 225 0 0 0 chr2L 19167292 19167317 -3844227 + (TCCTG)n Simple_repeat Simple_repeat 3 27 0 9 731 180 158 0 0 chr2L 19168409 19168447 -3843097 + (TCG)n Simple_repeat Simple_repeat 2 39 0 9 731 225 235 0 0 chr2L 19168915 19168966 -3842578 + (CAG)n Simple_repeat Simple_repeat 3 53 0 9 731 222 171 0 0 chr2L 19169080 19169121 -3842423 + (CAA)n Simple_repeat Simple_repeat 3 43 0 9 731 31 68 0 0 chr2L 19171512 19171571 -3839973 + AT_rich Low_complexity Low_complexity 1 59 0 9 731 25 31 0 0 chr2L 19172102 19172134 -3839410 + AT_rich Low_complexity Low_complexity 1 32 0 9 731 21 0 0 0 chr2L 19172425 19172446 -3839098 + AT_rich Low_complexity Low_complexity 1 21 0 9 731 22 0 0 0 chr2L 19173754 19173776 -3837768 + AT_rich Low_complexity Low_complexity 1 22 0 9 731 25 31 0 0 chr2L 19174519 19174551 -3836993 + AT_rich Low_complexity Low_complexity 1 32 0 9 731 303 113 0 0 chr2L 19174799 19174852 -3836692 + (TA)n Simple_repeat Simple_repeat 2 54 0 9 731 251 28 0 27 chr2L 19175183 19175220 -3836324 + (CGAAT)n Simple_repeat Simple_repeat 2 37 0 9 731 198 0 0 0 chr2L 19175961 19175983 -3835561 + (TA)n Simple_repeat Simple_repeat 2 23 0 9 731 223 191 0 0 chr2L 19176320 19176362 -3835182 + (TA)n Simple_repeat Simple_repeat 1 42 0 9 731 248 0 0 30 chr2L 19176377 19176410 -3835134 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 9 731 189 0 0 0 chr2L 19176639 19176660 -3834884 + (TATATG)n Simple_repeat Simple_repeat 4 24 0 9 731 182 37 0 36 chr2L 19177047 19177075 -3834469 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 9 731 21 0 0 0 chr2L 19177336 19177357 -3834187 + AT_rich Low_complexity Low_complexity 1 21 0 9 731 21 0 0 0 chr2L 19177699 19177720 -3833824 + AT_rich Low_complexity Low_complexity 1 21 0 9 731 29 0 0 0 chr2L 19177939 19177968 -3833576 + AT_rich Low_complexity Low_complexity 1 29 0 9 731 234 136 0 0 chr2L 19177968 19178012 -3833532 + (CAAAAA)n Simple_repeat Simple_repeat 4 47 0 9 731 213 264 0 14 chr2L 19178396 19178469 -3833075 + A-rich Low_complexity Low_complexity 4 75 0 9 731 205 250 0 0 chr2L 19178634 19178678 -3832866 + GA-rich Low_complexity Low_complexity 2 45 0 9 731 366 157 0 0 chr2L 19178845 19178928 -3832616 + (CTCA)n Simple_repeat Simple_repeat 3 85 0 9 731 35 41 0 0 chr2L 19179573 19179622 -3831922 + AT_rich Low_complexity Low_complexity 1 49 0 9 731 22 0 0 0 chr2L 19182547 19182569 -3828975 + AT_rich Low_complexity Low_complexity 1 22 0 9 731 354 123 0 34 chr2L 19182910 19182969 -3828575 + DMRP1 Unknown Unknown 93 149 -197 9 731 23 78 0 0 chr2L 19183959 19184010 -3827534 + AT_rich Low_complexity Low_complexity 1 51 0 9 731 21 71 0 0 chr2L 19191416 19191458 -3820086 + AT_rich Low_complexity Low_complexity 1 42 0 9 731 192 77 0 0 chr2L 19192643 19192669 -3818875 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 9 731 210 350 0 0 chr2L 19194068 19194148 -3817396 + (CAG)n Simple_repeat Simple_repeat 3 82 0 9 731 22 35 0 0 chr2L 19195243 19195272 -3816272 + AT_rich Low_complexity Low_complexity 1 29 0 9 731 219 36 0 0 chr2L 19196590 19196618 -3814926 + (TCC)n Simple_repeat Simple_repeat 3 30 0 9 731 28 29 0 0 chr2L 19197060 19197095 -3814449 + AT_rich Low_complexity Low_complexity 1 35 0 9 731 198 71 0 0 chr2L 19200719 19200747 -3810797 + (CACTT)n Simple_repeat Simple_repeat 2 29 0 9 731 261 119 0 0 chr2L 19204386 19204428 -3807116 + (CAACT)n Simple_repeat Simple_repeat 1 42 0 9 731 258 32 0 0 chr2L 19204718 19204749 -3806795 + (CAG)n Simple_repeat Simple_repeat 1 31 0 9 731 31 0 0 0 chr2L 19207153 19207184 -3804360 + AT_rich Low_complexity Low_complexity 1 31 0 9 731 22 0 0 0 chr2L 19208089 19208111 -3803433 + AT_rich Low_complexity Low_complexity 1 22 0 9 731 261 57 0 0 chr2L 19214628 19214663 -3796881 + (CCTG)n Simple_repeat Simple_repeat 1 35 0 9 731 21 89 0 0 chr2L 19214925 19214981 -3796563 + AT_rich Low_complexity Low_complexity 1 56 0 9 731 22 0 0 0 chr2L 19216063 19216085 -3795459 + AT_rich Low_complexity Low_complexity 1 22 0 9 731 261 75 0 0 chr2L 19219126 19219166 -3792378 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 9 731 243 0 0 0 chr2L 19226097 19226124 -3785420 + (CCGAA)n Simple_repeat Simple_repeat 4 30 0 9 731 189 94 0 0 chr2L 19226139 19226171 -3785373 + (CCTAT)n Simple_repeat Simple_repeat 1 32 0 9 731 306 73 0 0 chr2L 19236130 19236171 -3775373 + (CCGAA)n Simple_repeat Simple_repeat 4 44 0 9 731 232 200 22 0 chr2L 19239127 19239172 -3772372 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 9 731 270 0 0 0 chr2L 19240605 19240635 -3770909 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 731 222 217 17 0 chr2L 19243052 19243112 -3768432 + (CAGC)n Simple_repeat Simple_repeat 1 61 0 9 731 23 0 0 0 chr2L 19243708 19243731 -3767813 + AT_rich Low_complexity Low_complexity 1 23 0 9 731 183 129 0 0 chr2L 19245980 19246011 -3765533 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 731 21 57 0 0 chr2L 19247460 19247495 -3764049 + AT_rich Low_complexity Low_complexity 1 35 0 9 731 27 0 0 0 chr2L 19248263 19248290 -3763254 + AT_rich Low_complexity Low_complexity 1 27 0 9 731 21 0 0 0 chr2L 19249182 19249203 -3762341 + AT_rich Low_complexity Low_complexity 1 21 0 9 731 23 78 0 0 chr2L 19249297 19249348 -3762196 + AT_rich Low_complexity Low_complexity 1 51 0 9 731 28 29 0 0 chr2L 19249389 19249424 -3762120 + AT_rich Low_complexity Low_complexity 1 35 0 9 731 23 78 0 0 chr2L 19249791 19249842 -3761702 + AT_rich Low_complexity Low_complexity 1 51 0 9 731 213 196 0 0 chr2L 19250029 19250085 -3761459 + (CACCAT)n Simple_repeat Simple_repeat 1 56 0 9 731 223 163 0 0 chr2L 19254530 19254573 -3756971 + GA-rich Low_complexity Low_complexity 2 44 0 9 731 29 28 0 0 chr2L 19255120 19255156 -3756388 + AT_rich Low_complexity Low_complexity 1 36 0 9 731 336 164 0 0 chr2L 19258523 19258590 -3752954 + (TCCG)n Simple_repeat Simple_repeat 1 67 0 9 731 224 306 14 40 chr2L 19260159 19260376 -3751168 + T-rich Low_complexity Low_complexity 1 211 0 9 731 190 274 0 31 chr2L 19260398 19260496 -3751048 + CT-rich Low_complexity Low_complexity 3 97 0 9 731 219 204 0 0 chr2L 19260606 19260655 -3750889 + CT-rich Low_complexity Low_complexity 3 51 0 9 731 359 263 12 41 chr2L 19260679 19261022 -3750522 + T-rich Low_complexity Low_complexity 1 333 0 9 731 202 286 0 0 chr2L 19263734 19263797 -3747747 + (TG)n Simple_repeat Simple_repeat 1 63 0 9 731 237 65 0 0 chr2L 19264661 19264692 -3746852 + (CAGT)n Simple_repeat Simple_repeat 1 31 0 9 731 36 82 0 0 chr2L 19266544 19266629 -3744915 + AT_rich Low_complexity Low_complexity 1 85 0 9 732 203 376 0 0 chr2L 19267875 19267968 -3743576 + (TTGGGG)n Simple_repeat Simple_repeat 2 94 0 9 732 21 0 0 0 chr2L 19268486 19268507 -3743037 + AT_rich Low_complexity Low_complexity 1 21 0 9 732 733 85 28 0 chr2L 19272531 19272637 -3738907 + BS LINE Jockey 5014 5122 -4 9 732 255 122 0 0 chr2L 19272715 19272756 -3738788 + DNAREP1_DM LINE Penelope 450 490 -104 9 732 182 37 37 0 chr2L 19273742 19273769 -3737775 + (CAGGC)n Simple_repeat Simple_repeat 4 31 0 9 732 180 0 0 0 chr2L 19277963 19277983 -3733561 + (GAA)n Simple_repeat Simple_repeat 1 20 0 9 732 210 231 0 0 chr2L 19280579 19280618 -3730926 + (CGA)n Simple_repeat Simple_repeat 3 41 0 9 732 22 0 0 0 chr2L 19282832 19282854 -3728690 + AT_rich Low_complexity Low_complexity 1 22 0 9 732 189 147 0 0 chr2L 19287678 19287712 -3723832 + (TTCGGG)n Simple_repeat Simple_repeat 6 39 0 9 732 325 217 0 0 chr2L 19289936 19290005 -3721539 - DNAREP1_DM LINE Penelope 0 594 526 9 732 212 167 0 0 chr2L 19291913 19291949 -3719595 + (CATATA)n Simple_repeat Simple_repeat 2 37 0 9 732 204 163 0 0 chr2L 19294945 19294988 -3716556 + GA-rich Low_complexity Low_complexity 3 45 0 9 732 206 180 0 39 chr2L 19295854 19295906 -3715638 + (GTCTG)n Simple_repeat Simple_repeat 5 54 0 9 732 27 29 0 0 chr2L 19298588 19298622 -3712922 + AT_rich Low_complexity Low_complexity 1 34 0 9 732 24 53 0 0 chr2L 19298938 19298976 -3712568 + AT_rich Low_complexity Low_complexity 1 38 0 9 732 21 36 0 0 chr2L 19301567 19301595 -3709949 + AT_rich Low_complexity Low_complexity 1 28 0 9 732 234 0 0 0 chr2L 19301891 19301917 -3709627 + (A)n Simple_repeat Simple_repeat 1 26 0 9 732 213 217 0 0 chr2L 19304607 19304653 -3706891 + (CCCA)n Simple_repeat Simple_repeat 2 47 0 9 732 234 128 0 0 chr2L 19306223 19306262 -3705282 + (TGGA)n Simple_repeat Simple_repeat 2 40 0 9 732 26 0 0 0 chr2L 19310974 19311000 -3700544 + AT_rich Low_complexity Low_complexity 1 26 0 9 732 30 103 0 0 chr2L 19313129 19313236 -3698308 + AT_rich Low_complexity Low_complexity 1 107 0 9 732 201 147 0 0 chr2L 19319451 19319485 -3692059 + (GGATG)n Simple_repeat Simple_repeat 5 38 0 9 732 207 250 0 0 chr2L 19321269 19321309 -3690235 + G-rich Low_complexity Low_complexity 2 41 0 9 732 22 0 0 0 chr2L 19321789 19321811 -3689733 + AT_rich Low_complexity Low_complexity 1 22 0 9 732 222 91 0 0 chr2L 19324917 19324950 -3686594 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 732 210 91 0 0 chr2L 19328603 19328636 -3682908 + (ATG)n Simple_repeat Simple_repeat 3 35 0 9 732 192 200 0 0 chr2L 19328974 19329034 -3682510 + (CAG)n Simple_repeat Simple_repeat 3 62 0 9 732 22 0 0 0 chr2L 19333583 19333605 -3677939 + AT_rich Low_complexity Low_complexity 1 22 0 9 732 191 36 0 35 chr2L 19334739 19334768 -3676776 + (CAA)n Simple_repeat Simple_repeat 2 29 0 9 732 26 30 0 0 chr2L 19335253 19335286 -3676258 + AT_rich Low_complexity Low_complexity 1 33 0 9 732 206 238 0 0 chr2L 19338683 19338725 -3672819 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 9 732 183 100 0 0 chr2L 19342479 19342509 -3669035 + (CAGG)n Simple_repeat Simple_repeat 2 31 0 9 732 232 178 0 0 chr2L 19343382 19343427 -3668117 + A-rich Low_complexity Low_complexity 1 45 0 9 732 207 0 0 0 chr2L 19344696 19344719 -3666825 + (T)n Simple_repeat Simple_repeat 1 23 0 9 732 22849 0 0 0 chr2L 19345071 19347540 -3664004 + DOC LINE Jockey 5 2473 -2252 9 732 3730 0 0 5 chr2L 19347540 19347941 -3663603 + BLOOD_LTR LTR Gypsy 1 399 0 9 732 60046 2 0 1 chr2L 19347941 19354556 -3656988 + BLOOD_I LTR Gypsy 1 6613 0 9 732 3730 0 0 5 chr2L 19354556 19354957 -3656587 + BLOOD_LTR LTR Gypsy 1 399 0 9 732 20869 0 0 1 chr2L 19354957 19357215 -3654329 + DOC LINE Jockey 2470 4725 0 9 732 22 0 0 0 chr2L 19360689 19360711 -3650833 + AT_rich Low_complexity Low_complexity 1 22 0 9 732 25 0 0 0 chr2L 19361013 19361038 -3650506 + AT_rich Low_complexity Low_complexity 1 25 0 9 732 204 111 0 0 chr2L 19362391 19362427 -3649117 + (GA)n Simple_repeat Simple_repeat 2 37 0 9 732 22 56 0 0 chr2L 19363972 19364008 -3647536 + AT_rich Low_complexity Low_complexity 1 36 0 9 732 24 32 0 0 chr2L 19377231 19377262 -3634282 + AT_rich Low_complexity Low_complexity 1 31 0 9 732 21 36 0 0 chr2L 19383109 19383137 -3628407 + AT_rich Low_complexity Low_complexity 1 28 0 9 732 23 0 0 0 chr2L 19385965 19385988 -3625556 + AT_rich Low_complexity Low_complexity 1 23 0 9 732 22 0 0 0 chr2L 19387065 19387087 -3624457 + AT_rich Low_complexity Low_complexity 1 22 0 9 732 22 0 0 0 chr2L 19387437 19387459 -3624085 + AT_rich Low_complexity Low_complexity 1 22 0 9 732 246 62 0 0 chr2L 19398083 19398115 -3613429 + (GA)n Simple_repeat Simple_repeat 2 33 0 9 733 244 64 21 21 chr2L 19398740 19398788 -3612756 + (TTTTA)n Simple_repeat Simple_repeat 2 49 0 9 733 4096 55 9 17 chr2L 19399614 19400145 -3611399 - BS2 LINE Jockey -81 4640 4114 9 733 26 30 0 0 chr2L 19400172 19400205 -3611339 + AT_rich Low_complexity Low_complexity 1 33 0 9 733 444 234 306 62 chr2L 19400232 19400603 -3610941 - BS2 LINE Jockey -57 4664 4203 9 733 203 162 0 0 chr2L 19402897 19402934 -3608610 + (TTGG)n Simple_repeat Simple_repeat 2 38 0 9 733 21 0 0 0 chr2L 19403066 19403087 -3608457 + AT_rich Low_complexity Low_complexity 1 21 0 9 733 241 162 29 0 chr2L 19403350 19403418 -3608126 + (CTG)n Simple_repeat Simple_repeat 2 71 0 9 733 188 103 51 0 chr2L 19406535 19406574 -3604970 + (TGGG)n Simple_repeat Simple_repeat 1 41 0 9 733 593 195 207 0 chr2L 19408684 19408853 -3602691 - DNAREP1_DM LINE Penelope -23 571 368 9 733 21 0 0 0 chr2L 19409052 19409073 -3602471 + AT_rich Low_complexity Low_complexity 1 21 0 9 733 279 122 0 0 chr2L 19411910 19411959 -3599585 + (TA)n Simple_repeat Simple_repeat 2 50 0 9 733 200 226 0 19 chr2L 19414357 19414411 -3597133 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 733 33 94 0 0 chr2L 19414693 19414789 -3596755 + AT_rich Low_complexity Low_complexity 1 96 0 9 733 23 0 0 0 chr2L 19415663 19415686 -3595858 + AT_rich Low_complexity Low_complexity 1 23 0 9 733 192 97 0 0 chr2L 19421186 19421217 -3590327 + (A)n Simple_repeat Simple_repeat 1 31 0 9 733 26 0 0 0 chr2L 19423113 19423139 -3588405 + AT_rich Low_complexity Low_complexity 1 26 0 9 733 315 104 0 0 chr2L 19425564 19425612 -3585932 + (TATG)n Simple_repeat Simple_repeat 1 48 0 9 733 22 35 0 0 chr2L 19427015 19427044 -3584500 + AT_rich Low_complexity Low_complexity 1 29 0 9 733 29 28 0 0 chr2L 19434326 19434362 -3577182 + AT_rich Low_complexity Low_complexity 1 36 0 9 733 225 65 0 0 chr2L 19438805 19438836 -3572708 + (CACAA)n Simple_repeat Simple_repeat 1 31 0 9 733 24 0 0 0 chr2L 19440391 19440415 -3571129 + AT_rich Low_complexity Low_complexity 1 24 0 9 733 183 129 0 0 chr2L 19441110 19441141 -3570403 + (TA)n Simple_repeat Simple_repeat 2 32 0 9 733 21 36 0 0 chr2L 19442044 19442072 -3569472 + AT_rich Low_complexity Low_complexity 1 28 0 9 733 198 71 0 0 chr2L 19442767 19442795 -3568749 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 9 733 183 167 0 0 chr2L 19447755 19447797 -3563747 + (CAT)n Simple_repeat Simple_repeat 2 43 0 9 733 182 61 82 0 chr2L 19455672 19455721 -3555823 + (TA)n Simple_repeat Simple_repeat 2 54 0 9 733 25 0 0 0 chr2L 19457419 19457444 -3554100 + AT_rich Low_complexity Low_complexity 1 25 0 9 733 29 0 0 0 chr2L 19461035 19461064 -3550480 + AT_rich Low_complexity Low_complexity 1 29 0 9 733 25 0 0 0 chr2L 19462070 19462095 -3549449 + AT_rich Low_complexity Low_complexity 1 25 0 9 733 25 51 0 0 chr2L 19463385 19463424 -3548120 + AT_rich Low_complexity Low_complexity 1 39 0 9 733 183 139 0 0 chr2L 19465314 19465350 -3546194 + (CCG)n Simple_repeat Simple_repeat 1 36 0 9 733 226 329 0 0 chr2L 19465735 19465814 -3545730 + (CGG)n Simple_repeat Simple_repeat 1 79 0 9 733 205 206 0 31 chr2L 19466946 19467011 -3544533 + GA-rich Low_complexity Low_complexity 1 63 0 9 733 200 160 0 39 chr2L 19473509 19473561 -3537983 + A-rich Low_complexity Low_complexity 3 52 0 9 733 28 48 0 0 chr2L 19473685 19473727 -3537817 + AT_rich Low_complexity Low_complexity 1 42 0 9 733 186 150 0 0 chr2L 19474029 19474069 -3537475 + (TC)n Simple_repeat Simple_repeat 2 41 0 9 733 25 51 0 0 chr2L 19474892 19474931 -3536613 + AT_rich Low_complexity Low_complexity 1 39 0 9 733 266 263 0 0 chr2L 19475259 19475316 -3536228 + (CCCCAA)n Simple_repeat Simple_repeat 3 59 0 9 733 222 37 0 0 chr2L 19479844 19479871 -3531673 + (GA)n Simple_repeat Simple_repeat 1 27 0 9 733 26 30 0 0 chr2L 19486497 19486530 -3525014 + AT_rich Low_complexity Low_complexity 1 33 0 9 733 22 35 0 0 chr2L 19490213 19490242 -3521302 + AT_rich Low_complexity Low_complexity 1 29 0 9 733 205 77 24 49 chr2L 19493082 19493123 -3518421 + (TATAA)n Simple_repeat Simple_repeat 1 40 0 9 733 244 357 0 0 chr2L 19500749 19500906 -3510638 + (CGG)n Simple_repeat Simple_repeat 1 157 0 9 733 21 0 0 0 chr2L 19502593 19502614 -3508930 + AT_rich Low_complexity Low_complexity 1 21 0 9 733 21 0 0 0 chr2L 19502771 19502792 -3508752 + AT_rich Low_complexity Low_complexity 1 21 0 9 733 391 95 16 0 chr2L 19506667 19506730 -3504814 - DMCR1A LINE CR1 -308 4162 4099 9 733 2123 138 151 6 chr2L 19506736 19507273 -3504271 - DMCR1A LINE CR1 -861 3609 2995 9 733 218 206 16 0 chr2L 19508474 19508537 -3503007 + (CAA)n Simple_repeat Simple_repeat 1 64 0 9 733 225 83 0 0 chr2L 19509206 19509242 -3502302 + (TCC)n Simple_repeat Simple_repeat 1 36 0 9 733 183 42 0 0 chr2L 19514561 19514585 -3496959 + (CAA)n Simple_repeat Simple_repeat 1 24 0 9 733 21 36 0 0 chr2L 19517335 19517363 -3494181 + AT_rich Low_complexity Low_complexity 1 28 0 9 733 254 264 0 0 chr2L 19518291 19518363 -3493181 + (TA)n Simple_repeat Simple_repeat 2 73 0 9 734 23 0 0 0 chr2L 19541605 19541628 -3469916 + AT_rich Low_complexity Low_complexity 1 23 0 9 734 258 0 71 0 chr2L 19549506 19549548 -3461996 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 734 186 43 0 0 chr2L 19551268 19551291 -3460253 + (TA)n Simple_repeat Simple_repeat 2 24 0 9 734 21 0 0 0 chr2L 19565287 19565308 -3446236 + AT_rich Low_complexity Low_complexity 1 21 0 9 734 264 170 0 0 chr2L 19570447 19570500 -3441044 + (ATG)n Simple_repeat Simple_repeat 3 55 0 9 734 212 338 0 25 chr2L 19571189 19571268 -3440276 + (CATG)n Simple_repeat Simple_repeat 4 80 0 9 734 231 298 0 0 chr2L 19571210 19571267 -3440277 + (TATG)n Simple_repeat Simple_repeat 1 57 0 9 734 252 250 0 14 chr2L 19571463 19571532 -3440012 + (CAA)n Simple_repeat Simple_repeat 3 70 0 9 734 22 56 0 0 chr2L 19573657 19573693 -3437851 + AT_rich Low_complexity Low_complexity 1 36 0 9 734 195 129 0 0 chr2L 19574204 19574235 -3437309 + (ATG)n Simple_repeat Simple_repeat 1 31 0 9 734 34 102 0 0 chr2L 19582548 19582666 -3428878 + AT_rich Low_complexity Low_complexity 1 118 0 9 734 25 95 0 0 chr2L 19582832 19582906 -3428638 + AT_rich Low_complexity Low_complexity 1 74 0 9 734 204 40 0 0 chr2L 19584299 19584324 -3427220 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 9 734 225 119 0 0 chr2L 19587466 19587508 -3424036 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 734 212 225 0 0 chr2L 19592265 19592305 -3419239 + C-rich Low_complexity Low_complexity 1 40 0 9 734 216 0 0 0 chr2L 19592343 19592367 -3419177 + (CAG)n Simple_repeat Simple_repeat 1 24 0 9 734 248 91 23 0 chr2L 19594206 19594250 -3417294 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 734 195 189 0 0 chr2L 19594403 19594456 -3417088 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 734 180 0 0 0 chr2L 19598077 19598097 -3413447 + (A)n Simple_repeat Simple_repeat 1 20 0 9 734 23 0 0 0 chr2L 19598199 19598222 -3413322 + AT_rich Low_complexity Low_complexity 1 23 0 9 734 21 57 0 0 chr2L 19600055 19600090 -3411454 + AT_rich Low_complexity Low_complexity 1 35 0 9 734 26 0 0 0 chr2L 19600806 19600832 -3410712 + AT_rich Low_complexity Low_complexity 1 26 0 9 734 21 36 0 0 chr2L 19601080 19601108 -3410436 + AT_rich Low_complexity Low_complexity 1 28 0 9 734 21 71 0 0 chr2L 19601135 19601177 -3410367 + AT_rich Low_complexity Low_complexity 1 42 0 9 734 198 0 0 0 chr2L 19602430 19602452 -3409092 + (CA)n Simple_repeat Simple_repeat 1 22 0 9 734 224 156 22 0 chr2L 19602499 19602544 -3409000 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 734 23 54 0 0 chr2L 19603751 19603788 -3407756 + AT_rich Low_complexity Low_complexity 1 37 0 9 734 189 0 0 0 chr2L 19605110 19605131 -3406413 + (CA)n Simple_repeat Simple_repeat 2 22 0 9 734 25 31 0 0 chr2L 19606022 19606054 -3405490 + AT_rich Low_complexity Low_complexity 1 32 0 9 734 29 0 0 0 chr2L 19606069 19606098 -3405446 + AT_rich Low_complexity Low_complexity 1 29 0 9 734 22 80 0 0 chr2L 19606138 19606188 -3405356 + AT_rich Low_complexity Low_complexity 1 50 0 9 734 222 37 0 0 chr2L 19607384 19607411 -3404133 + (GTTTG)n Simple_repeat Simple_repeat 1 27 0 9 734 255 125 0 0 chr2L 19609505 19609545 -3401999 + (CATATA)n Simple_repeat Simple_repeat 4 43 0 9 734 31 0 0 0 chr2L 19611381 19611412 -3400132 + AT_rich Low_complexity Low_complexity 1 31 0 9 734 192 77 0 0 chr2L 19612920 19612946 -3398598 + (CAG)n Simple_repeat Simple_repeat 1 26 0 9 734 219 69 0 0 chr2L 19613340 19613369 -3398175 + (A)n Simple_repeat Simple_repeat 1 29 0 9 734 1394 110 154 21 chr2L 19614997 19615276 -3396268 - DMRP1 Unknown Unknown -28 318 3 9 734 213 132 0 0 chr2L 19617532 19617570 -3393974 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 9 734 30 27 0 0 chr2L 19618673 19618710 -3392834 + AT_rich Low_complexity Low_complexity 1 37 0 9 734 261 57 0 0 chr2L 19619649 19619684 -3391860 + (TA)n Simple_repeat Simple_repeat 1 35 0 9 734 256 194 16 0 chr2L 19619771 19619833 -3391711 + (TGGG)n Simple_repeat Simple_repeat 3 65 0 9 734 8350 4 0 8 chr2L 19620153 19621069 -3390475 + LINEJ1_DM LINE Jockey 4112 5020 0 9 734 189 0 0 0 chr2L 19624787 19624808 -3386736 + (CA)n Simple_repeat Simple_repeat 1 21 0 9 734 218 122 0 24 chr2L 19625152 19625194 -3386350 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 734 23 68 0 0 chr2L 19626018 19626062 -3385482 + AT_rich Low_complexity Low_complexity 1 44 0 9 734 27 73 0 0 chr2L 19626077 19626132 -3385412 + AT_rich Low_complexity Low_complexity 1 55 0 9 734 219 146 0 0 chr2L 19626643 19626684 -3384860 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 734 290 115 16 0 chr2L 19627345 19627406 -3384138 + (CA)n Simple_repeat Simple_repeat 1 62 0 9 734 239 93 23 0 chr2L 19627684 19627727 -3383817 + (GAATG)n Simple_repeat Simple_repeat 4 47 0 9 734 258 32 0 0 chr2L 19628060 19628091 -3383453 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 734 21 36 0 0 chr2L 19628152 19628180 -3383364 + AT_rich Low_complexity Low_complexity 1 28 0 9 734 192 97 0 0 chr2L 19630031 19630062 -3381482 + (CA)n Simple_repeat Simple_repeat 1 31 0 9 734 226 257 0 14 chr2L 19630462 19630533 -3381011 + T-rich Low_complexity Low_complexity 3 72 0 9 734 25 0 0 0 chr2L 19632480 19632505 -3379039 + AT_rich Low_complexity Low_complexity 1 25 0 9 734 201 74 0 0 chr2L 19635006 19635033 -3376511 + (TA)n Simple_repeat Simple_repeat 2 28 0 9 734 237 65 0 0 chr2L 19635071 19635102 -3376442 + (TTG)n Simple_repeat Simple_repeat 2 32 0 9 734 234 128 0 0 chr2L 19638203 19638242 -3373302 + (CAAAC)n Simple_repeat Simple_repeat 4 42 0 9 734 201 163 0 0 chr2L 19640009 19640058 -3371486 + GA-rich Low_complexity Low_complexity 1 49 0 9 734 183 235 0 0 chr2L 19640880 19640931 -3370613 + (CATATA)n Simple_repeat Simple_repeat 5 55 0 9 734 22 0 0 0 chr2L 19641319 19641341 -3370203 + AT_rich Low_complexity Low_complexity 1 22 0 9 734 25 0 0 0 chr2L 19642074 19642099 -3369445 + AT_rich Low_complexity Low_complexity 1 25 0 9 734 26 0 0 0 chr2L 19645729 19645755 -3365789 + AT_rich Low_complexity Low_complexity 1 26 0 9 734 487 176 0 136 chr2L 19645756 19645881 -3365663 + DMRP1 Unknown Unknown 228 335 -11 9 734 183 42 0 0 chr2L 19648050 19648074 -3363470 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 734 22 35 0 0 chr2L 19648398 19648427 -3363117 + AT_rich Low_complexity Low_complexity 1 29 0 9 734 186 133 0 0 chr2L 19650066 19650096 -3361448 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 9 734 23 0 0 0 chr2L 19650406 19650429 -3361115 + AT_rich Low_complexity Low_complexity 1 23 0 9 734 228 143 0 0 chr2L 19650597 19650639 -3360905 + (TA)n Simple_repeat Simple_repeat 2 43 0 9 734 231 36 0 0 chr2L 19651314 19651342 -3360202 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 9 734 180 0 0 0 chr2L 19651901 19651921 -3359623 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 9 734 189 74 0 0 chr2L 19652124 19652151 -3359393 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 9 734 27 29 0 0 chr2L 19652263 19652297 -3359247 + AT_rich Low_complexity Low_complexity 1 34 0 9 734 3999 2 0 0 chr2L 19652627 19653055 -3358489 + ROO_LTR LTR Pao 1 428 0 9 734 41559 1 21 2 chr2L 19653055 19657679 -3353865 + ROO_I LTR Pao 1 4713 -3543 9 734 4800 0 0 0 chr2L 19657679 19658197 -3353347 - NOMAD_LTR LTR Gypsy 0 518 1 9 91 61437 1 0 1 chr2L 19658197 19664770 -3346774 - NOMAD_I LTR Gypsy 0 6572 1 9 735 4800 0 0 0 chr2L 19664770 19665288 -3346256 - NOMAD_LTR LTR Gypsy 0 518 1 9 735 24733 3 0 0 chr2L 19665288 19668449 -3343095 + ROO_I LTR Pao 4710 7870 -386 9 735 43546 1 0 0 chr2L 19668467 19673190 -3338354 + DOC LINE Jockey 3 4725 0 9 735 3248 5 31 0 chr2L 19673186 19673575 -3337969 + ROO_I LTR Pao 7856 8256 0 9 735 3999 2 0 0 chr2L 19673575 19674003 -3337541 + ROO_LTR LTR Pao 1 428 0 9 735 194 105 0 26 chr2L 19675007 19675046 -3336498 + (TA)n Simple_repeat Simple_repeat 1 38 0 9 735 28 0 0 0 chr2L 19676142 19676170 -3335374 + AT_rich Low_complexity Low_complexity 1 28 0 9 735 222 91 0 0 chr2L 19678129 19678162 -3333382 + (TA)n Simple_repeat Simple_repeat 1 33 0 9 735 203 156 0 0 chr2L 19678445 19678477 -3333067 + (CATCT)n Simple_repeat Simple_repeat 5 36 0 9 735 24 32 0 0 chr2L 19679038 19679069 -3332475 + AT_rich Low_complexity Low_complexity 1 31 0 9 735 26 50 0 0 chr2L 19681749 19681789 -3329755 + AT_rich Low_complexity Low_complexity 1 40 0 9 735 234 105 0 0 chr2L 19683431 19683469 -3328075 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 735 31 26 0 0 chr2L 19683621 19683659 -3327885 + AT_rich Low_complexity Low_complexity 1 38 0 9 735 261 119 0 0 chr2L 19687585 19687627 -3323917 + (ATGGTG)n Simple_repeat Simple_repeat 1 42 0 9 735 265 150 0 0 chr2L 19687789 19687829 -3323715 - DNAREP1_DM LINE Penelope 0 594 555 9 735 283 254 123 0 chr2L 19687852 19687966 -3323578 - DNAREP1_DM LINE Penelope -104 490 363 9 735 391 125 0 0 chr2L 19688079 19688135 -3323409 - DNAREP1_DM LINE Penelope -538 56 1 9 735 207 0 0 0 chr2L 19688227 19688250 -3323294 + (T)n Simple_repeat Simple_repeat 1 23 0 9 735 210 136 0 0 chr2L 19690774 19690818 -3320726 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 735 26 0 0 0 chr2L 19694243 19694269 -3317275 + AT_rich Low_complexity Low_complexity 1 26 0 9 735 203 189 0 0 chr2L 19694527 19694564 -3316980 + T-rich Low_complexity Low_complexity 1 37 0 9 735 208 274 0 0 chr2L 19695792 19695843 -3315701 + (CCCCAG)n Simple_repeat Simple_repeat 3 53 0 9 735 216 0 0 0 chr2L 19696869 19696893 -3314651 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 735 183 42 0 0 chr2L 19698320 19698344 -3313200 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 735 213 154 0 0 chr2L 19702258 19702297 -3309247 + CT-rich Low_complexity Low_complexity 2 40 0 9 735 3982 5 0 0 chr2L 19703591 19704019 -3307525 - ROO_LTR LTR Pao 0 428 1 9 735 74779 1 4 0 chr2L 19704019 19712240 -3299304 - ROO_I LTR Pao 0 8256 2 9 735 3982 5 0 0 chr2L 19712241 19712669 -3298875 - ROO_LTR LTR Pao 0 428 1 9 735 257 261 0 0 chr2L 19714020 19714089 -3297455 + (CAG)n Simple_repeat Simple_repeat 1 69 0 9 735 212 211 19 0 chr2L 19717800 19717852 -3293692 + (TA)n Simple_repeat Simple_repeat 2 54 0 9 735 216 0 0 132 chr2L 19718543 19718611 -3292933 + (CACCAT)n Simple_repeat Simple_repeat 1 59 0 9 735 186 128 0 0 chr2L 19718831 19718870 -3292674 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 9 735 198 0 0 0 chr2L 19719622 19719644 -3291900 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 9 735 225 139 0 0 chr2L 19720311 19720354 -3291190 + (TA)n Simple_repeat Simple_repeat 2 44 0 9 735 21 0 0 0 chr2L 19720537 19720558 -3290986 + AT_rich Low_complexity Low_complexity 1 21 0 9 735 24 0 0 0 chr2L 19721273 19721297 -3290247 + AT_rich Low_complexity Low_complexity 1 24 0 9 735 25 0 0 0 chr2L 19721461 19721486 -3290058 + AT_rich Low_complexity Low_complexity 1 25 0 9 735 28 0 0 0 chr2L 19723824 19723852 -3287692 + AT_rich Low_complexity Low_complexity 1 28 0 9 735 21 36 0 0 chr2L 19725232 19725260 -3286284 + AT_rich Low_complexity Low_complexity 1 28 0 9 735 27 0 0 0 chr2L 19725424 19725451 -3286093 + AT_rich Low_complexity Low_complexity 1 27 0 9 735 29 60 0 0 chr2L 19736862 19736912 -3274632 + AT_rich Low_complexity Low_complexity 1 50 0 9 735 24 67 0 0 chr2L 19737048 19737093 -3274451 + AT_rich Low_complexity Low_complexity 1 45 0 9 735 5090 26 2 0 chr2L 19737410 19737996 -3273548 + PROTOP DNA P 1 587 -3893 9 735 23954 20 7 5 chr2L 19737987 19740819 -3270725 + PROTOP DNA P 1643 4480 0 9 735 232 200 286 0 chr2L 19742615 19742685 -3268859 - DNAREP1_DM LINE Penelope -37 557 468 9 735 231 257 0 0 chr2L 19744130 19744204 -3267340 + CT-rich Low_complexity Low_complexity 2 75 0 9 735 282 213 56 0 chr2L 19755994 19756102 -3255442 - ROO_I LTR Pao -7504 752 639 9 735 207 211 0 0 chr2L 19756249 19756287 -3255257 + (TTG)n Simple_repeat Simple_repeat 1 38 0 9 735 348 130 0 0 chr2L 19756371 19756440 -3255104 + (CTG)n Simple_repeat Simple_repeat 3 71 0 9 735 212 176 59 0 chr2L 19756457 19756508 -3255036 + G-rich Low_complexity Low_complexity 3 56 0 9 735 23 0 0 0 chr2L 19760962 19760985 -3250559 + AT_rich Low_complexity Low_complexity 1 23 0 9 735 258 115 49 0 chr2L 19761014 19761075 -3250469 + (TA)n Simple_repeat Simple_repeat 2 65 0 9 735 227 176 39 0 chr2L 19761104 19761155 -3250389 + (TA)n Simple_repeat Simple_repeat 2 54 0 9 735 1664 5 0 5 chr2L 19762861 19763048 -3248496 - POGON1 DNA Pogo 0 186 1 9 735 23 33 0 0 chr2L 19765147 19765177 -3246367 + AT_rich Low_complexity Low_complexity 1 30 0 9 735 229 227 30 20 chr2L 19768300 19768399 -3243145 + T-rich Low_complexity Low_complexity 2 101 0 9 735 21 71 0 0 chr2L 19770307 19770349 -3241195 + AT_rich Low_complexity Low_complexity 1 42 0 9 735 25 0 0 0 chr2L 19770389 19770414 -3241130 + AT_rich Low_complexity Low_complexity 1 25 0 9 735 208 95 0 45 chr2L 19770564 19770608 -3240936 + (TTA)n Simple_repeat Simple_repeat 1 42 0 9 735 22 0 0 0 chr2L 19771089 19771111 -3240433 + AT_rich Low_complexity Low_complexity 1 22 0 9 735 23 33 0 0 chr2L 19771871 19771901 -3239643 + AT_rich Low_complexity Low_complexity 1 30 0 9 735 308 163 0 0 chr2L 19774156 19774205 -3237339 + DNAREP1_DM LINE Penelope 14 62 -532 9 735 607 109 231 16 chr2L 19774527 19774648 -3236896 + DNAREP1_DM LINE Penelope 8 154 -440 9 735 22 35 0 0 chr2L 19783578 19783607 -3227937 + AT_rich Low_complexity Low_complexity 1 29 0 9 735 228 120 0 57 chr2L 19783677 19783730 -3227814 + (GGATG)n Simple_repeat Simple_repeat 1 50 0 9 735 233 264 0 0 chr2L 19785320 19785392 -3226152 + (CAGT)n Simple_repeat Simple_repeat 3 74 0 9 735 183 129 0 0 chr2L 19787052 19787083 -3224461 + (TA)n Simple_repeat Simple_repeat 2 32 0 9 735 201 156 0 0 chr2L 19788415 19788447 -3223097 + (CAA)n Simple_repeat Simple_repeat 2 33 0 9 735 202 246 16 16 chr2L 19789423 19789485 -3222059 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 9 735 228 35 0 0 chr2L 19791126 19791155 -3220389 + (CAGA)n Simple_repeat Simple_repeat 1 29 0 9 735 232 292 15 0 chr2L 19791652 19791717 -3219827 + (CACG)n Simple_repeat Simple_repeat 4 69 0 9 736 22 56 0 0 chr2L 19792790 19792826 -3218718 + AT_rich Low_complexity Low_complexity 1 36 0 9 736 180 77 0 0 chr2L 19792929 19792955 -3218589 + (CAT)n Simple_repeat Simple_repeat 3 28 0 9 736 263 194 0 16 chr2L 19794412 19794475 -3217069 + (CA)n Simple_repeat Simple_repeat 2 63 0 9 736 217 186 34 34 chr2L 19794679 19794768 -3216776 + (CTG)n Simple_repeat Simple_repeat 3 91 0 9 736 225 158 0 0 chr2L 19795597 19795635 -3215909 + C-rich Low_complexity Low_complexity 6 43 0 9 736 240 35 0 0 chr2L 19796626 19796655 -3214889 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 736 28 91 0 0 chr2L 19798378 19798455 -3213089 + AT_rich Low_complexity Low_complexity 1 77 0 9 736 28 0 0 0 chr2L 19799052 19799080 -3212464 + AT_rich Low_complexity Low_complexity 1 28 0 9 736 21 0 0 0 chr2L 19799218 19799239 -3212305 + AT_rich Low_complexity Low_complexity 1 21 0 9 736 288 77 0 0 chr2L 19799866 19799905 -3211639 + (CAGC)n Simple_repeat Simple_repeat 4 42 0 9 736 22 35 0 0 chr2L 19808207 19808236 -3203308 + AT_rich Low_complexity Low_complexity 1 29 0 9 736 21 0 0 0 chr2L 19809276 19809297 -3202247 + AT_rich Low_complexity Low_complexity 1 21 0 9 736 23 0 0 0 chr2L 19812838 19812861 -3198683 + AT_rich Low_complexity Low_complexity 1 23 0 9 736 1552 94 253 3 chr2L 19813215 19813515 -3198029 - DNAREP1_DM LINE Penelope 0 594 220 9 736 23 0 0 0 chr2L 19813725 19813748 -3197796 + AT_rich Low_complexity Low_complexity 1 23 0 9 736 23 0 0 0 chr2L 19815588 19815611 -3195933 + AT_rich Low_complexity Low_complexity 1 23 0 9 736 523 206 104 55 chr2L 19816084 19816248 -3195296 + DNAREP1_DM LINE Penelope 423 594 0 9 736 343 107 107 0 chr2L 19816763 19816819 -3194725 - DNAREP1_DM LINE Penelope -4 590 529 9 736 297 197 0 0 chr2L 19816864 19816925 -3194619 - DNAREP1_DM LINE Penelope -475 119 59 9 736 429 165 176 0 chr2L 19817001 19817172 -3194372 + DNAREP1_DM LINE Penelope 354 594 0 9 736 1605 58 0 5 chr2L 19817899 19818108 -3193436 - G4_DM LINE Jockey -221 3635 3428 9 736 1717 10 0 0 chr2L 19818106 19818298 -3193246 - G4_DM LINE Jockey -515 3341 3150 9 736 2467 75 0 3 chr2L 19818288 19818611 -3192933 - G4_DM LINE Jockey -974 2882 2561 9 736 22 35 0 0 chr2L 19819584 19819613 -3191931 + AT_rich Low_complexity Low_complexity 1 29 0 9 736 225 163 0 0 chr2L 19820781 19820830 -3190714 + CT-rich Low_complexity Low_complexity 1 49 0 9 736 23 33 0 0 chr2L 19828889 19828919 -3182625 + AT_rich Low_complexity Low_complexity 1 30 0 9 736 204 40 0 0 chr2L 19830917 19830942 -3180602 + (CAGTC)n Simple_repeat Simple_repeat 3 27 0 9 736 22 0 0 0 chr2L 19832454 19832476 -3179068 + AT_rich Low_complexity Low_complexity 1 22 0 9 736 207 213 0 47 chr2L 19833621 19833685 -3177859 + T-rich Low_complexity Low_complexity 2 62 0 9 736 195 69 0 0 chr2L 19835731 19835760 -3175784 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 736 312 70 0 0 chr2L 19838616 19838659 -3172885 + (GGATG)n Simple_repeat Simple_repeat 4 46 0 9 736 216 0 0 0 chr2L 19839891 19839915 -3171629 + (CAT)n Simple_repeat Simple_repeat 3 26 0 9 736 207 0 0 0 chr2L 19841878 19841901 -3169643 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 736 23 33 0 0 chr2L 19842462 19842492 -3169052 + AT_rich Low_complexity Low_complexity 1 30 0 9 736 291 130 0 0 chr2L 19843321 19843375 -3168169 + (TTGG)n Simple_repeat Simple_repeat 4 57 0 9 736 252 130 0 0 chr2L 19844764 19844810 -3166734 + (A)n Simple_repeat Simple_repeat 1 46 0 9 736 285 29 0 0 chr2L 19845983 19846017 -3165527 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 736 21 36 0 0 chr2L 19847491 19847519 -3164025 + AT_rich Low_complexity Low_complexity 1 28 0 9 736 26 30 0 0 chr2L 19852596 19852629 -3158915 + AT_rich Low_complexity Low_complexity 1 33 0 9 736 189 0 0 0 chr2L 19855581 19855602 -3155942 + (TTA)n Simple_repeat Simple_repeat 1 21 0 9 736 22 0 0 0 chr2L 19858546 19858568 -3152976 + AT_rich Low_complexity Low_complexity 1 22 0 9 736 22 56 0 0 chr2L 19863191 19863227 -3148317 + AT_rich Low_complexity Low_complexity 1 36 0 9 736 180 125 0 0 chr2L 19863379 19863411 -3148133 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 9 736 212 167 0 0 chr2L 19864646 19864688 -3146856 + A-rich Low_complexity Low_complexity 1 42 0 9 736 26 0 0 0 chr2L 19870643 19870669 -3140875 + AT_rich Low_complexity Low_complexity 1 26 0 9 736 288 53 0 0 chr2L 19871352 19871390 -3140154 + (ATG)n Simple_repeat Simple_repeat 2 39 0 9 736 226 234 16 0 chr2L 19873654 19873718 -3137826 + (CAACC)n Simple_repeat Simple_repeat 4 68 0 9 736 246 257 0 26 chr2L 19874941 19875017 -3136527 + (CATATA)n Simple_repeat Simple_repeat 5 78 0 9 736 230 281 12 0 chr2L 19875110 19875192 -3136352 + (CAGA)n Simple_repeat Simple_repeat 4 86 0 9 736 21 36 0 0 chr2L 19875670 19875698 -3135846 + AT_rich Low_complexity Low_complexity 1 28 0 9 736 183 129 0 0 chr2L 19878465 19878496 -3133048 + (A)n Simple_repeat Simple_repeat 1 31 0 9 736 198 103 0 0 chr2L 19880708 19880737 -3130807 + (GAGTG)n Simple_repeat Simple_repeat 5 33 0 9 736 24 32 0 0 chr2L 19883893 19883924 -3127620 + AT_rich Low_complexity Low_complexity 1 31 0 9 736 240 86 0 0 chr2L 19887231 19887266 -3124278 + (CAG)n Simple_repeat Simple_repeat 1 35 0 9 736 29 28 0 0 chr2L 19895882 19895918 -3115626 + AT_rich Low_complexity Low_complexity 1 36 0 9 736 202 150 0 24 chr2L 19901334 19901375 -3110169 + (GTTTG)n Simple_repeat Simple_repeat 1 40 0 9 736 207 69 0 0 chr2L 19905682 19905711 -3105833 + (TA)n Simple_repeat Simple_repeat 1 29 0 9 736 22 35 0 0 chr2L 19910658 19910687 -3100857 + AT_rich Low_complexity Low_complexity 1 29 0 9 736 21 57 0 0 chr2L 19912527 19912562 -3098982 + AT_rich Low_complexity Low_complexity 1 35 0 9 736 21 71 0 0 chr2L 19912898 19912940 -3098604 + AT_rich Low_complexity Low_complexity 1 42 0 9 736 53 17 0 0 chr2L 19915217 19915277 -3096267 + AT_rich Low_complexity Low_complexity 1 60 0 9 736 21 0 0 0 chr2L 19915923 19915944 -3095600 + AT_rich Low_complexity Low_complexity 1 21 0 9 737 201 74 0 0 chr2L 19925491 19925518 -3086026 + (CAA)n Simple_repeat Simple_repeat 2 28 0 9 737 25 31 0 0 chr2L 19929564 19929596 -3081948 + AT_rich Low_complexity Low_complexity 1 32 0 9 737 27 0 0 0 chr2L 19931421 19931448 -3080096 + AT_rich Low_complexity Low_complexity 1 27 0 9 737 223 195 0 0 chr2L 19935825 19935866 -3075678 + (TA)n Simple_repeat Simple_repeat 2 42 0 9 737 204 163 0 0 chr2L 19944092 19944135 -3067409 + A-rich Low_complexity Low_complexity 1 43 0 9 737 214 250 0 0 chr2L 19949037 19949085 -3062459 + (ACTG)n Simple_repeat Simple_repeat 1 48 0 9 737 240 185 0 0 chr2L 19951613 19951667 -3059877 + (TTG)n Simple_repeat Simple_repeat 3 56 0 9 737 225 186 34 0 chr2L 19952400 19952459 -3059085 + ROO_I LTR Pao 676 736 -7520 9 737 21 36 0 0 chr2L 19958549 19958577 -3052967 + AT_rich Low_complexity Low_complexity 1 28 0 9 737 23 0 0 0 chr2L 19958615 19958638 -3052906 + AT_rich Low_complexity Low_complexity 1 23 0 9 737 22 35 0 0 chr2L 19961749 19961778 -3049766 + AT_rich Low_complexity Low_complexity 1 29 0 9 737 275 324 0 0 chr2L 19963218 19963292 -3048252 + C-rich Low_complexity Low_complexity 4 77 0 9 737 21 0 0 0 chr2L 19964614 19964635 -3046909 + AT_rich Low_complexity Low_complexity 1 21 0 9 737 33 25 0 0 chr2L 19968679 19968719 -3042825 + AT_rich Low_complexity Low_complexity 1 40 0 9 737 231 157 0 0 chr2L 19971839 19971890 -3039654 + (GCTG)n Simple_repeat Simple_repeat 2 52 0 9 737 200 116 0 65 chr2L 19975579 19975625 -3035919 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 9 737 216 0 0 0 chr2L 19979907 19979931 -3031613 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 9 737 21 0 0 0 chr2L 19984764 19984785 -3026759 + AT_rich Low_complexity Low_complexity 1 21 0 9 737 216 0 0 0 chr2L 19985899 19985923 -3025621 + (TC)n Simple_repeat Simple_repeat 2 25 0 9 737 207 0 0 0 chr2L 19986061 19986084 -3025460 + (CTAG)n Simple_repeat Simple_repeat 1 23 0 9 737 27 49 0 0 chr2L 19988102 19988143 -3023401 + AT_rich Low_complexity Low_complexity 1 41 0 9 737 31 26 0 0 chr2L 19990284 19990322 -3021222 + AT_rich Low_complexity Low_complexity 1 38 0 9 737 23 33 0 0 chr2L 19991364 19991394 -3020150 + AT_rich Low_complexity Low_complexity 1 30 0 9 737 189 121 0 0 chr2L 19993944 19993977 -3017567 + (CAATC)n Simple_repeat Simple_repeat 2 34 0 9 737 318 247 10 0 chr2L 19995900 19995997 -3015547 + (ACTG)n Simple_repeat Simple_repeat 4 101 0 9 737 267 79 0 0 chr2L 19998706 19998744 -3012800 + (CAGT)n Simple_repeat Simple_repeat 4 41 0 9 737 26 0 0 0 chr2L 20001804 20001830 -3009714 + AT_rich Low_complexity Low_complexity 1 26 0 9 737 237 108 0 0 chr2L 20004551 20004588 -3006956 + (ACTG)n Simple_repeat Simple_repeat 1 37 0 9 737 2050 19 22 7 chr2L 20005926 20006197 -3005347 + BLASTOPIA_LTR LTR Gypsy 1 275 0 9 737 38912 2 1 0 chr2L 20006197 20010674 -3000870 + BLASTOPIA_I LTR Gypsy 1 4481 0 9 737 2050 19 22 7 chr2L 20010674 20010945 -3000599 + BLASTOPIA_LTR LTR Gypsy 1 275 0 9 737 46 19 0 0 chr2L 20011784 20011837 -2999707 + AT_rich Low_complexity Low_complexity 1 53 0 9 737 1226 83 11 0 chr2L 20018076 20018361 -2993183 + (TCTA)n Simple_repeat Simple_repeat 1 288 0 9 737 23 0 0 0 chr2L 20018764 20018787 -2992757 + AT_rich Low_complexity Low_complexity 1 23 0 9 737 231 36 0 0 chr2L 20019094 20019122 -2992422 + (TAG)n Simple_repeat Simple_repeat 1 28 0 9 737 217 179 25 13 chr2L 20020208 20020287 -2991257 + (TGGG)n Simple_repeat Simple_repeat 2 81 0 9 737 30 27 0 0 chr2L 20022158 20022195 -2989349 + AT_rich Low_complexity Low_complexity 1 37 0 9 737 26 30 0 0 chr2L 20023942 20023975 -2987569 + AT_rich Low_complexity Low_complexity 1 33 0 9 737 35 24 0 0 chr2L 20024303 20024345 -2987199 + AT_rich Low_complexity Low_complexity 1 42 0 9 737 708 175 62 67 chr2L 20024536 20024744 -2986800 - DNAREP1_DM LINE Penelope -10 584 378 9 737 36 23 0 0 chr2L 20024798 20024841 -2986703 + AT_rich Low_complexity Low_complexity 1 43 0 9 737 21 36 0 0 chr2L 20024931 20024959 -2986585 + AT_rich Low_complexity Low_complexity 1 28 0 9 737 24 0 0 0 chr2L 20025089 20025113 -2986431 + AT_rich Low_complexity Low_complexity 1 24 0 9 737 1380 149 139 46 chr2L 20025903 20026394 -2985150 + DNAREP1_DM LINE Penelope 2 590 -4 9 737 285 202 165 46 chr2L 20026563 20026672 -2984872 - DNAREP1_DM LINE Penelope -3 591 470 9 737 24 0 0 0 chr2L 20033284 20033308 -2978236 + AT_rich Low_complexity Low_complexity 1 24 0 9 737 248 269 0 0 chr2L 20033325 20033392 -2978152 - DNAREP1_DM LINE Penelope -526 68 2 9 737 284 130 0 0 chr2L 20034415 20034461 -2977083 + DNAREP1_DM LINE Penelope 1 46 -548 9 737 208 143 0 0 chr2L 20043947 20043982 -2967562 + (A)n Simple_repeat Simple_repeat 1 35 0 9 737 256 185 19 0 chr2L 20045068 20045122 -2966422 + DNAREP1_DM LINE Penelope 2 56 -538 9 737 378 218 149 7 chr2L 20045293 20045461 -2966083 + DNAREP1_DM LINE Penelope 433 593 -1 9 737 22 0 0 0 chr2L 20047784 20047806 -2963738 + AT_rich Low_complexity Low_complexity 1 22 0 9 737 288 233 0 14 chr2L 20051418 20051492 -2960052 + (TG)n Simple_repeat Simple_repeat 2 74 0 9 737 23 0 0 0 chr2L 20053344 20053367 -2958177 + AT_rich Low_complexity Low_complexity 1 23 0 9 737 21 0 0 0 chr2L 20053937 20053958 -2957586 + AT_rich Low_complexity Low_complexity 1 21 0 9 738 207 0 0 0 chr2L 20055993 20056016 -2955528 + (TA)n Simple_repeat Simple_repeat 2 24 0 9 738 243 0 0 0 chr2L 20057573 20057600 -2953944 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 738 180 0 0 0 chr2L 20065758 20065778 -2945766 + (T)n Simple_repeat Simple_repeat 1 20 0 9 738 458 168 303 11 chr2L 20068577 20068752 -2942792 - DNAREP1_DM LINE Penelope 0 594 369 9 738 21 0 0 0 chr2L 20078097 20078118 -2933426 + AT_rich Low_complexity Low_complexity 1 21 0 9 738 189 0 0 0 chr2L 20080680 20080701 -2930843 + (TATAG)n Simple_repeat Simple_repeat 4 24 0 9 738 22 80 0 0 chr2L 20081661 20081711 -2929833 + AT_rich Low_complexity Low_complexity 1 50 0 9 738 26 0 0 0 chr2L 20082277 20082303 -2929241 + AT_rich Low_complexity Low_complexity 1 26 0 9 738 213 39 0 0 chr2L 20084382 20084408 -2927136 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 738 24 0 0 0 chr2L 20085539 20085563 -2925981 + AT_rich Low_complexity Low_complexity 1 24 0 9 738 24 53 0 0 chr2L 20087350 20087388 -2924156 + AT_rich Low_complexity Low_complexity 1 38 0 9 738 25 75 0 0 chr2L 20089628 20089681 -2921863 + AT_rich Low_complexity Low_complexity 1 53 0 9 738 192 40 0 0 chr2L 20094359 20094384 -2917160 + (CA)n Simple_repeat Simple_repeat 1 25 0 9 738 24 32 0 0 chr2L 20097303 20097334 -2914210 + AT_rich Low_complexity Low_complexity 1 31 0 9 738 227 161 0 18 chr2L 20097895 20097952 -2913592 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 738 27 0 0 0 chr2L 20098782 20098809 -2912735 + AT_rich Low_complexity Low_complexity 1 27 0 9 738 413 226 21 0 chr2L 20099223 20099316 -2912228 - DNAREP1_DM LINE Penelope 0 594 500 9 738 274 200 100 0 chr2L 20099497 20099557 -2911987 - DNAREP1_DM LINE Penelope -520 74 9 9 738 28 0 0 0 chr2L 20101599 20101627 -2909917 + AT_rich Low_complexity Low_complexity 1 28 0 9 738 32 0 0 0 chr2L 20104187 20104219 -2907325 + AT_rich Low_complexity Low_complexity 1 32 0 9 738 2825 147 94 6 chr2L 20104935 20105422 -2906122 - G_DM LINE Jockey -940 3406 2877 9 738 1262 305 100 43 chr2L 20105436 20106582 -2904962 - G6_DM LINE Jockey -337 1705 508 9 738 24 0 0 0 chr2L 20107011 20107035 -2904509 + AT_rich Low_complexity Low_complexity 1 24 0 9 738 16090 46 48 1 chr2L 20107035 20107535 -2904009 - BS2 LINE Jockey 0 4721 4154 9 738 189 0 0 0 chr2L 20107535 20107556 -2903988 + (TAG)n Simple_repeat Simple_repeat 2 22 0 9 738 16090 46 48 1 chr2L 20107556 20109033 -2902511 - BS2 LINE Jockey -568 4153 2652 9 738 5261 123 16 1 chr2L 20109019 20109811 -2901733 - BS2 LINE Jockey -2378 2343 1540 9 738 8136 70 2 1 chr2L 20109915 20110920 -2900624 - BS LINE Jockey -578 4548 3543 9 738 4298 20 0 0 chr2L 20110940 20111428 -2900116 - G2_DM LINE Jockey -700 2402 1915 9 738 5959 34 0 0 chr2L 20111424 20112127 -2899417 + G2_DM LINE Jockey 2395 3097 -5 9 738 2018 48 0 32 chr2L 20112134 20112416 -2899128 - G5_DM LINE Jockey -12 4844 4572 9 738 556 285 73 15 chr2L 20112488 20112762 -2898782 + BS LINE Jockey 2034 2323 -2803 9 738 830 246 9 9 chr2L 20112769 20112982 -2898562 + BS LINE Jockey 2551 2763 -2363 9 738 404 237 38 15 chr2L 20112981 20113106 -2898438 + BS LINE Jockey 3187 3314 -1812 9 738 4270 32 2 26 chr2L 20113106 20113752 -2897792 - TC1-2_DM DNA Tc1 -1 1643 954 9 738 1394 253 67 100 chr2L 20113748 20114943 -2896601 - Transib5 DNA Transib -1787 1214 59 9 738 482 108 108 0 chr2L 20114969 20115052 -2896492 - DNAREP1_DM LINE Penelope -481 113 22 9 738 21 0 0 0 chr2L 20115505 20115526 -2896018 + AT_rich Low_complexity Low_complexity 1 21 0 9 738 1462 250 104 8 chr2L 20116172 20116644 -2894900 - BS2 LINE Jockey -445 4276 3760 9 738 304 281 0 11 chr2L 20116658 20116748 -2894796 - BS2 LINE Jockey -1070 3651 3563 9 738 1400 239 59 0 chr2L 20116752 20117108 -2894436 - BS2 LINE Jockey -1618 3103 2727 9 738 879 95 29 0 chr2L 20117101 20117238 -2894306 + PROTOP DNA P 128 268 -4212 9 738 378 194 187 36 chr2L 20117436 20117575 -2893969 + PROTOP DNA P 1 160 -4320 9 738 821 168 6 23 chr2L 20118047 20118218 -2893326 - HETRP_DM Satellite Satellite -187 1685 1518 9 738 26 0 0 0 chr2L 20118419 20118445 -2893099 + AT_rich Low_complexity Low_complexity 1 26 0 9 738 425 93 0 13 chr2L 20118737 20118813 -2892731 + PROTOP DNA P 3847 3921 -559 9 738 863 115 76 48 chr2L 20118852 20119062 -2892482 + PROTOP DNA P 3388 3603 -877 9 738 1439 66 24 0 chr2L 20119078 20119291 -2892253 + Jockey2 LINE Jockey 3184 3401 -27 9 738 375 319 16 16 chr2L 20119926 20120120 -2891424 + LINEJ1_DM LINE Jockey 2430 2623 -2397 9 738 21 0 0 0 chr2L 20127197 20127218 -2884326 + AT_rich Low_complexity Low_complexity 1 21 0 9 738 21 0 0 0 chr2L 20128964 20128985 -2882559 + AT_rich Low_complexity Low_complexity 1 21 0 9 738 218 146 0 40 chr2L 20129204 20129254 -2882290 + (CCCA)n Simple_repeat Simple_repeat 3 50 0 9 738 195 42 0 0 chr2L 20130906 20130930 -2880614 + (TGGA)n Simple_repeat Simple_repeat 4 27 0 9 738 255 149 0 0 chr2L 20136342 20136389 -2875155 - DNAREP1_DM LINE Penelope -2 592 546 9 738 22 35 0 0 chr2L 20148201 20148230 -2863314 + AT_rich Low_complexity Low_complexity 1 29 0 9 738 4336 30 5 12 chr2L 20148650 20149215 -2862329 - PROTOP DNA P -974 3506 2946 9 738 6964 21 73 0 chr2L 20149213 20150118 -2861426 - PROTOP DNA P -2424 2056 1086 9 738 9422 32 20 20 chr2L 20150148 20150213 -2861331 - G_DM LINE Jockey -8 4338 4275 9 738 180 0 0 0 chr2L 20150213 20150233 -2861311 + (G)n Simple_repeat Simple_repeat 1 20 0 9 738 9422 32 20 20 chr2L 20150233 20151411 -2860133 - G_DM LINE Jockey -72 4274 3095 9 738 545 88 12 0 chr2L 20151406 20151486 -2860058 - G2_DM LINE Jockey -1763 1339 1259 9 738 6294 122 20 5 chr2L 20151483 20152810 -2858734 - G2_DM LINE Jockey -2213 2133 4 9 738 228 295 11 0 chr2L 20152876 20152971 -2858573 + HOBO DNA hAT 1558 1653 -1363 9 738 18272 2 0 1 chr2L 20153108 20155231 -2856313 - POGO DNA Pogo 0 2121 1 9 738 499 115 31 0 chr2L 20155635 20155731 -2855813 + PROTOP DNA P 3521 3619 -861 9 738 2249 4 4 0 chr2L 20155808 20156083 -2855461 + Copia_LTR LTR Copia 1 276 0 9 738 433 0 0 0 chr2L 20156083 20156133 -2855411 + Copia_I LTR Copia 1 50 -4543 9 738 6093 3 0 1 chr2L 20156131 20156835 -2854709 - POGO DNA Pogo -1418 703 1 9 738 499 115 31 0 chr2L 20157239 20157335 -2854209 + PROTOP DNA P 3521 3619 -861 9 738 2249 4 4 0 chr2L 20157412 20157687 -2853857 + Copia_LTR LTR Copia 1 276 0 9 738 433 0 0 0 chr2L 20157687 20157737 -2853807 + Copia_I LTR Copia 1 50 -4543 9 738 6093 3 0 1 chr2L 20157735 20158439 -2853105 - POGO DNA Pogo -1418 703 1 9 738 499 115 31 0 chr2L 20158843 20158939 -2852605 + PROTOP DNA P 3521 3619 -861 9 738 2249 4 4 0 chr2L 20159016 20159291 -2852253 + Copia_LTR LTR Copia 1 276 0 9 738 21986 7 1 3 chr2L 20159291 20163993 -2847551 + Copia_I LTR Copia 1 4593 0 9 738 2249 4 4 0 chr2L 20163993 20164268 -2847276 + Copia_LTR LTR Copia 1 276 0 9 738 1825 40 219 0 chr2L 20164281 20164900 -2846644 + HELENA_RT LINE Jockey 1 755 -562 9 738 974 33 0 0 chr2L 20164899 20165020 -2846524 + HELENA_RT LINE Jockey 883 1003 -314 9 738 1402 138 13 26 chr2L 20165006 20165363 -2846181 + HELENA_RT LINE Jockey 1136 1317 0 9 738 1066 49 0 0 chr2L 20165375 20165518 -2846026 + PROTOP DNA P 3603 3745 -735 9 738 1650 94 3 108 chr2L 20165757 20166090 -2845454 - Invader3_LTR LTR Gypsy 0 298 1 9 738 9242 36 81 6 chr2L 20166131 20167373 -2844171 - PROTOP DNA P -201 4279 2946 9 738 5330 25 122 6 chr2L 20167371 20168473 -2843071 - PROTOP DNA P -2424 2056 827 9 738 1417 118 123 33 chr2L 20168531 20168908 -2842636 + M4DM DNA Transib 1 411 -1024 9 738 316 297 41 41 chr2L 20168908 20169080 -2842464 - TRANSIB1 DNA Transib -661 2353 2182 9 738 5121 100 38 24 chr2L 20169481 20170273 -2841271 + M4DM DNA Transib 615 1417 -18 9 738 547 0 311 0 chr2L 20170276 20170350 -2841194 - PROTOP DNA P -4383 97 1 9 738 3830 119 90 213 chr2L 20170363 20171587 -2839957 + Invader4_I LTR Gypsy 860 1932 -481 9 738 250 86 0 0 chr2L 20171587 20171622 -2839922 + Invader4_I LTR Gypsy 2150 2184 -229 9 738 949 83 0 50 chr2L 20171622 20171762 -2839782 - TRANSIB2 DNA Transib 0 2844 2712 9 738 1559 67 5 5 chr2L 20171761 20171971 -2839573 - TRANSIB2 DNA Transib -2633 211 2 9 738 1456 62 36 96 chr2L 20171971 20172221 -2839323 + Invader4_I LTR Gypsy 2179 2413 0 9 738 2315 128 9 3 chr2L 20172221 20172565 -2838979 + Invader4_LTR LTR Gypsy 1 346 0 9 738 4209 112 50 27 chr2L 20172567 20173301 -2838243 - S_DM DNA Tc1 0 1736 986 9 738 5330 109 47 13 chr2L 20173312 20174151 -2837393 - S_DM DNA Tc1 -869 867 1 9 738 1398 98 10 5 chr2L 20174151 20174348 -2837196 + IVK_DM LINE I 3765 3962 -1440 9 738 227 32 0 0 chr2L 20174354 20174385 -2837159 + G4_DM LINE Jockey 3656 3686 -170 9 738 722 89 224 0 chr2L 20174381 20174547 -2836997 - PROTOP DNA P -3904 576 345 9 738 1142 90 40 0 chr2L 20174505 20174706 -2836838 + S2_DM DNA Tc1 1527 1735 0 9 738 194 91 30 0 chr2L 20174724 20174757 -2836787 + (TA)n Simple_repeat Simple_repeat 1 34 0 9 738 31 26 0 0 chr2L 20174785 20174823 -2836721 + AT_rich Low_complexity Low_complexity 1 38 0 9 738 859 141 7 32 chr2L 20175014 20175168 -2836376 + HETRP_DM Satellite Satellite 1520 1669 -203 9 738 285 84 329 66 chr2L 20175700 20175776 -2835768 + M4DM DNA Transib 1 96 -1339 9 738 249 97 0 0 chr2L 20175776 20175807 -2835737 - Invader3_LTR LTR Gypsy 0 298 268 9 738 7251 12 17 0 chr2L 20175809 20176623 -2834921 - Invader3_I LTR Gypsy -4060 828 1 9 738 1287 57 0 0 chr2L 20176623 20176782 -2834762 - Invader3_LTR LTR Gypsy 0 298 140 9 738 4629 0 0 0 chr2L 20176782 20177277 -2834267 - GTWIN_LTR LTR Gypsy 0 495 1 9 738 60165 0 0 0 chr2L 20177277 20183698 -2827846 - GTWIN_I LTR Gypsy 0 6421 1 9 738 4629 0 0 0 chr2L 20183698 20184193 -2827351 - GTWIN_LTR LTR Gypsy 0 495 1 9 92 60207 0 0 0 chr2L 20184193 20190614 -2820930 - GTWIN_I LTR Gypsy 0 6421 1 9 739 4629 0 0 0 chr2L 20190614 20191109 -2820435 - GTWIN_LTR LTR Gypsy 0 495 1 9 739 60189 0 0 0 chr2L 20191109 20197530 -2814014 - GTWIN_I LTR Gypsy 0 6421 1 9 739 4629 0 0 0 chr2L 20197530 20198025 -2813519 - GTWIN_LTR LTR Gypsy 0 495 1 9 739 1077 23 92 0 chr2L 20198025 20198156 -2813388 - Invader3_LTR LTR Gypsy -155 143 1 9 739 9976 16 0 0 chr2L 20198156 20199265 -2812279 + Invader3_I LTR Gypsy 2555 3663 -1225 9 739 4649 2 2 10 chr2L 20199265 20199775 -2811769 - HOBO DNA hAT 0 3016 2511 9 739 8492 1 0 0 chr2L 20199767 20200671 -2810873 - HOBO DNA hAT -2112 904 1 9 739 3483 25 0 2 chr2L 20200671 20201069 -2810475 + Invader3_I LTR Gypsy 3656 4052 -836 9 739 556 54 0 39 chr2L 20201041 20201118 -2810426 + Invader3_I LTR Gypsy 4815 4888 0 9 739 1819 94 0 110 chr2L 20201118 20201453 -2810091 + Invader3_LTR LTR Gypsy 1 298 0 9 739 507 40 160 0 chr2L 20201468 20201543 -2810001 - Transib5 DNA Transib -164 2837 2751 9 739 4155 24 14 19 chr2L 20201539 20202049 -2809495 - Transib5 DNA Transib -517 2484 1978 9 739 2284 26 8 0 chr2L 20202049 20202313 -2809231 + Invader2_LTR LTR Gypsy 1 266 0 9 739 2940 23 20 0 chr2L 20202313 20202661 -2808883 - Transib5 DNA Transib -1020 1981 1627 9 739 1132 134 77 4 chr2L 20202638 20202871 -2808673 - HOBO DNA hAT -339 2677 2428 9 739 2484 123 21 35 chr2L 20202881 20203490 -2808054 - HOBO DNA hAT -556 2460 1640 9 739 1100 109 75 35 chr2L 20203484 20203684 -2807860 - HOBO DNA hAT -1526 1490 1283 9 739 7408 70 26 22 chr2L 20203677 20204705 -2806839 - HOBO DNA hAT -1655 1361 330 9 739 1749 98 228 25 chr2L 20204682 20205077 -2806467 - PROTOP_B DNA P -675 478 4 9 739 1009 131 4 198 chr2L 20205077 20205313 -2806231 - HOBO DNA hAT -2736 280 93 9 739 875 316 36 38 chr2L 20205523 20206126 -2805418 + HOBO DNA hAT 618 1219 -1797 9 739 2452 65 9 9 chr2L 20206182 20206509 -2805035 - G2_DM LINE Jockey -31 3071 2745 9 739 4622 66 30 2 chr2L 20206501 20207126 -2804418 - G2_DM LINE Jockey -469 2633 1991 9 739 2194 41 86 6 chr2L 20207126 20207637 -2803907 - G2_DM LINE Jockey -1292 1810 1259 9 739 6547 123 38 4 chr2L 20207634 20208940 -2802604 - G2_DM LINE Jockey -2213 2133 4 9 739 290 269 19 58 chr2L 20208950 20209104 -2802440 + HOBO DNA hAT 1506 1653 -1363 9 739 1825 75 4 42 chr2L 20209179 20209442 -2802102 + MDG3_LTR LTR Gypsy 15 267 0 9 739 8664 23 17 7 chr2L 20209442 20210487 -2801057 - PROTOP DNA P -479 4001 2946 9 739 5330 26 122 6 chr2L 20210485 20211587 -2799957 - PROTOP DNA P -2424 2056 827 9 739 1417 118 123 33 chr2L 20211645 20212022 -2799522 + M4DM DNA Transib 1 411 -1024 9 739 316 297 41 41 chr2L 20212022 20212194 -2799350 - TRANSIB1 DNA Transib -661 2353 2182 9 739 270 310 77 57 chr2L 20212347 20212593 -2798951 - TRANSIB2 DNA Transib -776 2068 1818 9 739 2070 102 193 9 chr2L 20212595 20213284 -2798260 + M4DM DNA Transib 615 1430 -5 9 739 29 0 0 0 chr2L 20213357 20213386 -2798158 + AT_rich Low_complexity Low_complexity 1 29 0 9 739 2392 102 140 41 chr2L 20213658 20214371 -2797173 - M4DM DNA Transib -37 1398 615 9 739 270 310 77 57 chr2L 20214373 20214619 -2796925 + TRANSIB2 DNA Transib 1818 2068 -776 9 739 316 297 41 41 chr2L 20214772 20214944 -2796600 + TRANSIB1 DNA Transib 2182 2353 -661 9 739 1232 97 0 33 chr2L 20214944 20215125 -2796419 - M4DM DNA Transib -1024 411 237 9 739 28555 0 0 0 chr2L 20215125 20218227 -2793317 - G2_DM LINE Jockey 0 3102 1 9 739 694 137 226 30 chr2L 20218227 20218435 -2793109 - M4DM DNA Transib -1187 248 1 9 739 8304 29 60 7 chr2L 20218493 20219534 -2792010 + PROTOP DNA P 827 1923 -2557 9 739 1425 85 0 0 chr2L 20219533 20219733 -2791811 + G2_DM LINE Jockey 2411 2610 -492 9 739 2357 77 12 9 chr2L 20219718 20220048 -2791496 + G2_DM LINE Jockey 2741 3071 -31 9 739 896 329 40 35 chr2L 20220094 20220778 -2790766 - HOBO DNA hAT -1797 1219 533 9 739 6506 24 91 1 chr2L 20220795 20222082 -2789462 + TRANSIB2 DNA Transib 1 1402 -1442 9 739 1029 58 0 7 chr2L 20222068 20222206 -2789338 + TRANSIB2 DNA Transib 2098 2234 -610 9 739 5058 49 9 9 chr2L 20222203 20222854 -2788690 + TRANSIB2 DNA Transib 1810 2844 0 9 739 310 85 0 33 chr2L 20223265 20223326 -2788218 + (ATATG)n Simple_repeat Simple_repeat 5 63 0 9 739 290 148 19 0 chr2L 20223326 20223380 -2788164 + DNAREP1_DM LINE Penelope 127 181 -413 9 739 354 285 13 77 chr2L 20223596 20223640 -2787904 + P_DG DNA P 2723 2756 -132 9 739 1249 140 163 0 chr2L 20223640 20223861 -2787683 - DNAREP1_DM LINE Penelope 0 594 338 9 739 587 236 272 4 chr2L 20223855 20224098 -2787446 + DNAREP1_DM LINE Penelope 287 594 0 9 739 25 0 0 0 chr2L 20224451 20224476 -2787068 + AT_rich Low_complexity Low_complexity 1 25 0 9 739 180 0 0 0 chr2L 20226036 20226056 -2785488 + (TG)n Simple_repeat Simple_repeat 2 21 0 9 739 224 167 36 36 chr2L 20227427 20227483 -2784061 + (CATA)n Simple_repeat Simple_repeat 4 59 0 9 739 223 208 19 0 chr2L 20228117 20228170 -2783374 + (CA)n Simple_repeat Simple_repeat 2 55 0 9 739 213 39 0 0 chr2L 20231116 20231142 -2780402 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 739 198 71 0 0 chr2L 20231188 20231216 -2780328 + (T)n Simple_repeat Simple_repeat 1 28 0 9 739 452 243 168 64 chr2L 20233116 20233318 -2778226 - DNAREP1_DM LINE Penelope -3 591 369 9 739 27 49 0 0 chr2L 20233382 20233423 -2778121 + AT_rich Low_complexity Low_complexity 1 41 0 9 739 23 33 0 0 chr2L 20233449 20233479 -2778065 + AT_rich Low_complexity Low_complexity 1 30 0 9 739 234 0 0 0 chr2L 20236190 20236216 -2775328 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 739 230 245 0 0 chr2L 20237244 20237297 -2774247 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 9 739 24 67 0 0 chr2L 20242234 20242279 -2769265 + AT_rich Low_complexity Low_complexity 1 45 0 9 739 21 100 0 0 chr2L 20242518 20242588 -2768956 + AT_rich Low_complexity Low_complexity 1 70 0 9 739 218 95 0 23 chr2L 20243762 20243805 -2767739 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 739 225 292 14 14 chr2L 20244916 20244989 -2766555 + (TATG)n Simple_repeat Simple_repeat 3 75 0 9 739 219 253 13 13 chr2L 20246381 20246457 -2765087 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 9 739 284 148 0 16 chr2L 20248237 20248299 -2763245 + (CAA)n Simple_repeat Simple_repeat 3 63 0 9 739 230 193 18 0 chr2L 20255161 20255218 -2756326 + (CA)n Simple_repeat Simple_repeat 1 58 0 9 739 21 0 0 0 chr2L 20258906 20258927 -2752617 + AT_rich Low_complexity Low_complexity 1 21 0 9 739 309 26 0 0 chr2L 20259373 20259411 -2752133 + (TTCTG)n Simple_repeat Simple_repeat 3 40 0 9 739 585 118 445 21 chr2L 20260959 20261146 -2750398 + DMRP1 Unknown Unknown 3 268 -78 9 739 183 42 0 0 chr2L 20261796 20261820 -2749724 + (CAGAA)n Simple_repeat Simple_repeat 1 24 0 9 739 252 0 0 0 chr2L 20263721 20263749 -2747795 + (CA)n Simple_repeat Simple_repeat 1 28 0 9 739 27 73 0 0 chr2L 20266273 20266328 -2745216 + AT_rich Low_complexity Low_complexity 1 55 0 9 739 30 0 0 0 chr2L 20266359 20266389 -2745155 + AT_rich Low_complexity Low_complexity 1 30 0 9 739 21 57 0 0 chr2L 20267400 20267435 -2744109 + AT_rich Low_complexity Low_complexity 1 35 0 9 739 183 250 0 0 chr2L 20271291 20271343 -2740201 + (TTGGGG)n Simple_repeat Simple_repeat 5 56 0 9 739 2452 4 0 0 chr2L 20272166 20272433 -2739111 - MDG3_LTR LTR Gypsy 0 267 1 9 739 3006 0 0 0 chr2L 20272433 20272781 -2738763 - MDG3_I LTR Gypsy 0 4986 4639 9 739 2468 0 0 0 chr2L 20272781 20273057 -2738487 + Copia_LTR LTR Copia 1 276 0 9 739 41971 1 0 0 chr2L 20273057 20277649 -2733895 + Copia_I LTR Copia 1 4593 0 9 739 2468 0 0 0 chr2L 20277649 20277925 -2733619 + Copia_LTR LTR Copia 1 276 0 9 739 42605 1 3 0 chr2L 20277925 20282554 -2728990 - MDG3_I LTR Gypsy -343 4643 1 9 739 2452 4 0 0 chr2L 20282553 20282820 -2728724 - MDG3_LTR LTR Gypsy 0 267 1 9 739 23 0 0 0 chr2L 20283845 20283868 -2727676 + AT_rich Low_complexity Low_complexity 1 23 0 9 739 201 289 0 0 chr2L 20290255 20290307 -2721237 + (TA)n Simple_repeat Simple_repeat 1 52 0 9 739 208 203 17 17 chr2L 20292480 20292540 -2719004 + (CA)n Simple_repeat Simple_repeat 1 60 0 9 739 32 0 0 0 chr2L 20296492 20296524 -2715020 + AT_rich Low_complexity Low_complexity 1 32 0 9 739 29 0 0 0 chr2L 20302861 20302890 -2708654 + AT_rich Low_complexity Low_complexity 1 29 0 9 739 3761 0 0 0 chr2L 20303215 20303614 -2707930 - BLOOD_LTR LTR Gypsy 0 399 1 9 739 60585 0 0 0 chr2L 20303614 20310227 -2701317 - BLOOD_I LTR Gypsy 0 6613 1 9 739 3761 0 0 0 chr2L 20310227 20310626 -2700918 - BLOOD_LTR LTR Gypsy 0 399 1 9 739 26 0 0 0 chr2L 20312553 20312579 -2698965 + AT_rich Low_complexity Low_complexity 1 26 0 9 740 183 156 0 0 chr2L 20317743 20317775 -2693769 + (ACTG)n Simple_repeat Simple_repeat 1 32 0 9 740 21 0 0 0 chr2L 20318895 20318916 -2692628 + AT_rich Low_complexity Low_complexity 1 21 0 9 740 180 111 0 0 chr2L 20324344 20324371 -2687173 + (CAT)n Simple_repeat Simple_repeat 1 27 0 9 740 233 266 0 0 chr2L 20324572 20324636 -2686908 + (ACTG)n Simple_repeat Simple_repeat 2 65 0 9 740 23 68 0 0 chr2L 20329692 20329736 -2681808 + AT_rich Low_complexity Low_complexity 1 44 0 9 740 210 71 0 0 chr2L 20330048 20330076 -2681468 + (TA)n Simple_repeat Simple_repeat 1 28 0 9 740 221 167 24 0 chr2L 20331357 20331399 -2680145 + (CTG)n Simple_repeat Simple_repeat 3 45 0 9 740 219 200 0 20 chr2L 20331485 20331536 -2680008 + (TA)n Simple_repeat Simple_repeat 1 50 0 9 740 258 116 0 0 chr2L 20333758 20333801 -2677743 + (TA)n Simple_repeat Simple_repeat 2 44 0 9 740 21 0 0 0 chr2L 20334038 20334059 -2677485 + AT_rich Low_complexity Low_complexity 1 21 0 9 740 23 0 0 0 chr2L 20334549 20334572 -2676972 + AT_rich Low_complexity Low_complexity 1 23 0 9 740 30 0 0 0 chr2L 20335071 20335101 -2676443 + AT_rich Low_complexity Low_complexity 1 30 0 9 740 206 191 0 93 chr2L 20338523 20338598 -2672946 + (CTG)n Simple_repeat Simple_repeat 3 70 0 9 740 191 114 29 0 chr2L 20339120 20339155 -2672389 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 9 740 26 30 0 0 chr2L 20344554 20344587 -2666957 + AT_rich Low_complexity Low_complexity 1 33 0 9 740 243 0 0 0 chr2L 20351259 20351286 -2660258 + (T)n Simple_repeat Simple_repeat 1 27 0 9 740 21 0 0 0 chr2L 20356051 20356072 -2655472 + AT_rich Low_complexity Low_complexity 1 21 0 9 740 204 188 0 0 chr2L 20360362 20360394 -2651150 + (CGG)n Simple_repeat Simple_repeat 2 33 0 9 740 217 200 0 0 chr2L 20360641 20360676 -2650868 + (CGG)n Simple_repeat Simple_repeat 3 37 0 9 740 230 229 0 35 chr2L 20362086 20362172 -2649372 + ROO_I LTR Pao 634 716 -7540 9 740 209 283 0 0 chr2L 20365561 20365607 -2645937 + (TGG)n Simple_repeat Simple_repeat 3 48 0 9 740 228 228 0 17 chr2L 20365700 20365758 -2645786 + (GCTG)n Simple_repeat Simple_repeat 4 60 0 9 740 194 33 67 0 chr2L 20368575 20368605 -2642939 + (CACTA)n Simple_repeat Simple_repeat 1 32 0 9 740 1711 0 0 0 chr2L 20372281 20372467 -2639077 + POGON1 DNA Pogo 1 186 0 9 740 315 133 0 0 chr2L 20375520 20375565 -2635979 + DNAREP1_DM LINE Penelope 18 62 -532 9 740 701 173 218 43 chr2L 20375578 20375789 -2635755 + DNAREP1_DM LINE Penelope 294 541 -53 9 740 194 219 0 27 chr2L 20381758 20381833 -2629711 + (CTG)n Simple_repeat Simple_repeat 2 74 0 9 740 182 37 0 36 chr2L 20384772 20384800 -2626744 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 9 740 23 54 0 0 chr2L 20389106 20389143 -2622401 + AT_rich Low_complexity Low_complexity 1 37 0 9 740 213 39 0 0 chr2L 20390213 20390239 -2621305 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 9 740 24 0 0 0 chr2L 20391059 20391083 -2620461 + AT_rich Low_complexity Low_complexity 1 24 0 9 740 180 200 0 0 chr2L 20392587 20392632 -2618912 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 9 740 189 0 0 0 chr2L 20392920 20392941 -2618603 + (TAA)n Simple_repeat Simple_repeat 1 21 0 9 740 210 206 0 0 chr2L 20395351 20395419 -2616125 + (ACTG)n Simple_repeat Simple_repeat 1 68 0 9 740 207 211 0 0 chr2L 20398457 20398495 -2613049 + A-rich Low_complexity Low_complexity 2 39 0 9 740 21 0 0 0 chr2L 20400109 20400130 -2611414 + AT_rich Low_complexity Low_complexity 1 21 0 9 740 23 0 0 0 chr2L 20402642 20402665 -2608879 + AT_rich Low_complexity Low_complexity 1 23 0 9 740 189 0 0 0 chr2L 20404633 20404654 -2606890 + (TAA)n Simple_repeat Simple_repeat 2 22 0 9 740 414 57 0 0 chr2L 20407815 20407868 -2603676 + (TA)n Simple_repeat Simple_repeat 1 53 0 9 740 2241 19 7 11 chr2L 20407868 20408140 -2603404 + BLASTOPIA_LTR LTR Gypsy 5 275 0 9 740 41573 1 1 0 chr2L 20408140 20412617 -2598927 + BLASTOPIA_I LTR Gypsy 1 4481 0 9 740 2279 18 7 11 chr2L 20412617 20412893 -2598651 + BLASTOPIA_LTR LTR Gypsy 1 275 0 9 740 1004 77 173 0 chr2L 20413580 20413736 -2597808 - DNAREP1_DM LINE Penelope -10 584 402 9 740 622 143 14 35 chr2L 20413779 20413980 -2597564 - DNAREP1_DM LINE Penelope -316 278 1 9 740 278 217 34 27 chr2L 20414150 20414285 -2597259 + DNAREP1_DM LINE Penelope 400 584 -10 9 740 25 31 0 0 chr2L 20416947 20416979 -2594565 + AT_rich Low_complexity Low_complexity 1 32 0 9 740 22 0 0 0 chr2L 20425635 20425657 -2585887 + AT_rich Low_complexity Low_complexity 1 22 0 9 740 201 229 0 0 chr2L 20426785 20426833 -2584711 + (CATATA)n Simple_repeat Simple_repeat 3 50 0 9 740 22 0 0 0 chr2L 20428265 20428287 -2583257 + AT_rich Low_complexity Low_complexity 1 22 0 9 740 201 94 0 0 chr2L 20430516 20430548 -2580996 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 740 210 143 0 0 chr2L 20432200 20432235 -2579309 + (CCG)n Simple_repeat Simple_repeat 3 37 0 9 740 228 200 0 0 chr2L 20432377 20432442 -2579102 + (CGG)n Simple_repeat Simple_repeat 2 66 0 9 740 672 199 37 12 chr2L 20434335 20434498 -2577046 + DNAREP1_DM LINE Penelope 387 553 -41 9 740 256 220 0 0 chr2L 20434510 20434560 -2576984 - DNAREP1_DM LINE Penelope -535 59 10 9 740 427 177 230 28 chr2L 20435202 20435355 -2576189 - DNAREP1_DM LINE Penelope -10 584 428 9 740 186 43 0 0 chr2L 20435980 20436003 -2575541 + (C)n Simple_repeat Simple_repeat 1 23 0 9 740 183 184 0 0 chr2L 20438542 20438580 -2572964 + (AGTTG)n Simple_repeat Simple_repeat 3 40 0 9 740 198 0 0 0 chr2L 20438631 20438653 -2572891 + (TG)n Simple_repeat Simple_repeat 1 22 0 9 740 22 0 0 0 chr2L 20440667 20440689 -2570855 + AT_rich Low_complexity Low_complexity 1 22 0 9 740 311 226 0 154 chr2L 20441313 20441423 -2570121 - DNAREP1_DM LINE Penelope -107 487 395 9 740 261 151 0 0 chr2L 20442433 20442486 -2569058 + (CAG)n Simple_repeat Simple_repeat 1 53 0 9 740 28 29 0 0 chr2L 20445170 20445205 -2566339 + AT_rich Low_complexity Low_complexity 1 35 0 9 740 249 300 25 0 chr2L 20445374 20445454 -2566090 + GA-rich Low_complexity Low_complexity 2 83 0 9 740 212 149 21 0 chr2L 20446112 20446159 -2565385 + (TATG)n Simple_repeat Simple_repeat 2 49 0 9 740 220 189 0 36 chr2L 20446428 20446483 -2565061 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 9 740 237 65 0 0 chr2L 20446516 20446547 -2564997 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 740 243 103 0 0 chr2L 20447113 20447152 -2564392 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 741 261 151 0 0 chr2L 20451551 20451604 -2559940 + (CAG)n Simple_repeat Simple_repeat 1 53 0 9 741 28 29 0 0 chr2L 20454294 20454329 -2557215 + AT_rich Low_complexity Low_complexity 1 35 0 9 741 254 291 25 0 chr2L 20454497 20454576 -2556968 + GA-rich Low_complexity Low_complexity 3 83 0 9 741 212 149 21 0 chr2L 20455234 20455281 -2556263 + (TATG)n Simple_repeat Simple_repeat 2 49 0 9 741 220 189 0 36 chr2L 20455550 20455605 -2555939 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 9 741 237 65 0 0 chr2L 20455638 20455669 -2555875 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 741 207 114 0 0 chr2L 20456234 20456269 -2555275 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 741 30 45 0 0 chr2L 20463881 20463925 -2547619 + AT_rich Low_complexity Low_complexity 1 44 0 1 741 31 26 0 0 chr2L 20464417 20464455 -2547089 + AT_rich Low_complexity Low_complexity 1 38 0 1 741 768 179 142 44 chr2L 20468133 20468337 -2543207 - DNAREP1_DM LINE Penelope -2 592 369 1 741 349 169 0 0 chr2L 20468422 20468481 -2543063 - DNAREP1_DM LINE Penelope -535 59 1 1 741 291 56 56 0 chr2L 20469106 20469160 -2542384 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 741 212 158 0 0 chr2L 20471099 20471137 -2540407 + (CCCA)n Simple_repeat Simple_repeat 2 39 0 1 741 27 0 0 0 chr2L 20471273 20471300 -2540244 + AT_rich Low_complexity Low_complexity 1 27 0 1 741 24 0 0 0 chr2L 20472794 20472818 -2538726 + AT_rich Low_complexity Low_complexity 1 24 0 1 741 237 180 66 0 chr2L 20473634 20473695 -2537849 + (CGAAA)n Simple_repeat Simple_repeat 2 66 0 1 741 24 0 0 0 chr2L 20474101 20474125 -2537419 + AT_rich Low_complexity Low_complexity 1 24 0 1 741 43 0 0 0 chr2L 20477586 20477629 -2533915 + AT_rich Low_complexity Low_complexity 1 43 0 1 741 22 56 0 0 chr2L 20479039 20479075 -2532469 + AT_rich Low_complexity Low_complexity 1 36 0 1 741 210 250 0 0 chr2L 20479702 20479754 -2531790 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 741 268 174 0 0 chr2L 20481654 20481700 -2529844 + DNAREP1_DM LINE Penelope 24 69 -525 1 741 27 0 0 0 chr2L 20482395 20482422 -2529122 + AT_rich Low_complexity Low_complexity 1 27 0 1 741 357 116 0 0 chr2L 20484234 20484303 -2527241 + (CATCC)n Simple_repeat Simple_repeat 2 70 0 1 741 197 180 20 0 chr2L 20484359 20484409 -2527135 + A-rich Low_complexity Low_complexity 4 54 0 1 741 218 204 0 0 chr2L 20486881 20486930 -2524614 + A-rich Low_complexity Low_complexity 1 49 0 1 741 210 71 0 0 chr2L 20487313 20487341 -2524203 + (CAT)n Simple_repeat Simple_repeat 1 28 0 1 741 23 0 0 0 chr2L 20487625 20487648 -2523896 + AT_rich Low_complexity Low_complexity 1 23 0 1 741 30 27 0 0 chr2L 20488929 20488966 -2522578 + AT_rich Low_complexity Low_complexity 1 37 0 1 741 25 31 0 0 chr2L 20489092 20489124 -2522420 + AT_rich Low_complexity Low_complexity 1 32 0 1 741 23 0 0 0 chr2L 20490279 20490302 -2521242 + AT_rich Low_complexity Low_complexity 1 23 0 1 741 31 26 0 0 chr2L 20490381 20490419 -2521125 + AT_rich Low_complexity Low_complexity 1 38 0 1 741 24 0 0 0 chr2L 20490744 20490768 -2520776 + AT_rich Low_complexity Low_complexity 1 24 0 1 741 578 167 22 73 chr2L 20491492 20491628 -2519916 - DNAREP1_DM LINE Penelope -101 493 365 1 741 40 87 0 0 chr2L 20494788 20494891 -2516653 + AT_rich Low_complexity Low_complexity 1 103 0 1 741 24 77 0 0 chr2L 20495497 20495549 -2515995 + AT_rich Low_complexity Low_complexity 1 52 0 1 741 570 193 156 0 chr2L 20497221 20497356 -2514188 - DNAREP1_DM LINE Penelope -6 588 433 1 741 208 245 0 0 chr2L 20497526 20497579 -2513965 + T-rich Low_complexity Low_complexity 6 58 0 1 741 222 61 61 0 chr2L 20498737 20498786 -2512758 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1 741 201 74 0 0 chr2L 20499470 20499497 -2512047 + (CCAA)n Simple_repeat Simple_repeat 4 30 0 1 741 200 118 29 0 chr2L 20500105 20500139 -2511405 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 741 228 86 0 0 chr2L 20502088 20502123 -2509421 + (TCG)n Simple_repeat Simple_repeat 2 36 0 1 741 192 125 0 0 chr2L 20504193 20504225 -2507319 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 1 741 22 0 0 0 chr2L 20508529 20508551 -2502993 + AT_rich Low_complexity Low_complexity 1 22 0 1 741 248 231 0 0 chr2L 20509920 20509985 -2501559 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 741 219 36 0 0 chr2L 20509990 20510018 -2501526 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 1 741 234 116 0 0 chr2L 20510711 20510754 -2500790 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 741 32 57 0 0 chr2L 20512843 20512896 -2498648 + AT_rich Low_complexity Low_complexity 1 53 0 1 741 237 65 0 0 chr2L 20514242 20514273 -2497271 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 1 741 24 32 0 0 chr2L 20514682 20514713 -2496831 + AT_rich Low_complexity Low_complexity 1 31 0 1 741 319 148 56 0 chr2L 20514742 20514796 -2496748 + DNAREP1_DM LINE Penelope 387 443 -151 1 741 27 0 0 0 chr2L 20521036 20521063 -2490481 + AT_rich Low_complexity Low_complexity 1 27 0 1 741 22 0 0 0 chr2L 20524241 20524263 -2487281 + AT_rich Low_complexity Low_complexity 1 22 0 1 741 252 132 0 0 chr2L 20525219 20525257 -2486287 + DNAREP1_DM LINE Penelope 435 472 -122 1 741 222 206 0 0 chr2L 20525857 20525920 -2485624 + (CATA)n Simple_repeat Simple_repeat 1 63 0 1 741 200 121 0 29 chr2L 20529204 20529238 -2482306 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 741 28 48 0 0 chr2L 20529360 20529402 -2482142 + AT_rich Low_complexity Low_complexity 1 42 0 1 741 24 32 0 0 chr2L 20529448 20529479 -2482065 + AT_rich Low_complexity Low_complexity 1 31 0 1 741 210 219 0 0 chr2L 20529933 20529997 -2481547 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 741 242 73 0 24 chr2L 20535017 20535059 -2476485 + (TTCCG)n Simple_repeat Simple_repeat 2 42 0 1 741 203 152 0 0 chr2L 20535062 20535095 -2476449 + (TCGGG)n Simple_repeat Simple_repeat 3 35 0 1 741 213 159 0 0 chr2L 20536845 20536889 -2474655 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 741 22 0 0 0 chr2L 20546004 20546026 -2465518 + AT_rich Low_complexity Low_complexity 1 22 0 1 741 228 250 12 12 chr2L 20546343 20546428 -2465116 + (TG)n Simple_repeat Simple_repeat 2 86 0 1 741 198 0 0 0 chr2L 20549477 20549499 -2462045 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 741 180 77 0 0 chr2L 20550639 20550665 -2460879 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 741 201 39 0 0 chr2L 20551406 20551432 -2460112 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 741 295 160 0 0 chr2L 20551490 20551540 -2460004 + (CAT)n Simple_repeat Simple_repeat 3 52 0 1 741 204 135 0 0 chr2L 20554597 20554634 -2456910 + (CCCCCG)n Simple_repeat Simple_repeat 3 39 0 1 741 25 51 0 0 chr2L 20555520 20555559 -2455985 + AT_rich Low_complexity Low_complexity 1 39 0 1 741 57 25 0 12 chr2L 20556837 20556851 -2454693 + AT_rich Low_complexity Low_complexity 1 14 0 1 741 297 89 0 0 chr2L 20556851 20556896 -2454648 + (TAA)n Simple_repeat Simple_repeat 2 46 0 1 741 57 25 0 12 chr2L 20556896 20556963 -2454581 + AT_rich Low_complexity Low_complexity 1 67 0 1 741 260 127 18 0 chr2L 20559095 20559150 -2452394 + (CCCA)n Simple_repeat Simple_repeat 3 58 0 1 741 261 75 0 0 chr2L 20561364 20561404 -2450140 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 741 325 189 31 21 chr2L 20562151 20562248 -2449296 - ROO_I LTR Pao -7507 749 652 1 741 231 125 0 0 chr2L 20562369 20562409 -2449135 + (CTG)n Simple_repeat Simple_repeat 3 42 0 1 741 21 0 0 0 chr2L 20563220 20563241 -2448303 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 183 80 0 0 chr2L 20566881 20566906 -2444638 + (ACTG)n Simple_repeat Simple_repeat 3 27 0 1 741 342 0 0 0 chr2L 20568708 20568746 -2442798 + (T)n Simple_repeat Simple_repeat 1 38 0 1 741 2760 3 0 0 chr2L 20568747 20569043 -2442501 - BS2 LINE Jockey 0 4721 4426 1 741 288 77 0 0 chr2L 20570822 20570861 -2440683 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 741 305 221 43 29 chr2L 20576028 20576098 -2435446 + DNAREP1_DM LINE Penelope 1 71 -523 1 741 3766 0 0 0 chr2L 20576273 20576672 -2434872 + BLOOD_LTR LTR Gypsy 1 399 0 1 92 60283 1 0 0 chr2L 20576672 20583285 -2428259 + BLOOD_I LTR Gypsy 1 6613 0 1 742 3766 0 0 0 chr2L 20583285 20583684 -2427860 + BLOOD_LTR LTR Gypsy 1 399 0 1 742 231 36 0 0 chr2L 20587475 20587503 -2424041 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 742 206 220 0 0 chr2L 20591831 20591881 -2419663 + CT-rich Low_complexity Low_complexity 3 52 0 1 742 23 0 0 0 chr2L 20596075 20596098 -2415446 + AT_rich Low_complexity Low_complexity 1 23 0 1 742 25 0 0 0 chr2L 20596234 20596259 -2415285 + AT_rich Low_complexity Low_complexity 1 25 0 1 742 186 150 0 0 chr2L 20596806 20596846 -2414698 + (A)n Simple_repeat Simple_repeat 1 40 0 1 742 201 74 0 0 chr2L 20597951 20597978 -2413566 + (TAAAG)n Simple_repeat Simple_repeat 2 28 0 1 742 22 0 0 0 chr2L 20602803 20602825 -2408719 + AT_rich Low_complexity Low_complexity 1 22 0 1 742 23 33 0 0 chr2L 20603510 20603540 -2408004 + AT_rich Low_complexity Low_complexity 1 30 0 1 742 246 136 0 0 chr2L 20604984 20605028 -2406516 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 1 742 28 29 0 0 chr2L 20611435 20611470 -2400074 + AT_rich Low_complexity Low_complexity 1 35 0 1 742 228 111 0 0 chr2L 20611970 20612006 -2399538 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 742 225 246 0 0 chr2L 20618016 20618081 -2393463 + (AACTG)n Simple_repeat Simple_repeat 4 68 0 1 742 22 35 0 0 chr2L 20618654 20618683 -2392861 + AT_rich Low_complexity Low_complexity 1 29 0 1 742 229 180 0 47 chr2L 20622022 20622086 -2389458 + (CATCC)n Simple_repeat Simple_repeat 5 65 0 1 742 21 36 0 0 chr2L 20625164 20625192 -2386352 + AT_rich Low_complexity Low_complexity 1 28 0 1 742 21 57 0 0 chr2L 20626909 20626944 -2384600 + AT_rich Low_complexity Low_complexity 1 35 0 1 742 27 0 0 0 chr2L 20630349 20630376 -2381168 + AT_rich Low_complexity Low_complexity 1 27 0 1 742 209 194 0 0 chr2L 20633605 20633641 -2377903 + (ATG)n Simple_repeat Simple_repeat 1 36 0 1 742 378 241 106 85 chr2L 20633863 20634099 -2377445 - DNAREP1_DM LINE Penelope 0 594 354 1 742 287 200 123 12 chr2L 20635180 20635261 -2376283 - DNAREP1_DM LINE Penelope -486 108 19 1 742 2746 40 86 0 chr2L 20635279 20635628 -2375916 + STALKER4_LTR LTR Gypsy 1 379 -23 1 742 1176 165 113 8 chr2L 20635784 20636023 -2375521 + DMCR1A LINE CR1 949 1212 -3258 1 742 3508 101 77 7 chr2L 20636014 20636563 -2374981 + DNAREP1_DM LINE Penelope 8 594 0 1 742 256 119 0 0 chr2L 20636561 20636603 -2374941 + DMCR1A LINE CR1 1394 1435 -3035 1 742 1127 144 85 0 chr2L 20636608 20636796 -2374748 + DMRT1C LINE R1 2395 2598 -2845 1 742 3199 167 100 22 chr2L 20637534 20638225 -2373319 + DMRT1C LINE R1 3352 4096 -1347 1 742 304 294 0 19 chr2L 20638225 20638329 -2373215 + MAX_I LTR Pao 6011 6112 -1802 1 742 249 57 0 0 chr2L 20638458 20638493 -2373051 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 742 236 214 50 20 chr2L 20638749 20638849 -2372695 + (TTTA)n Simple_repeat Simple_repeat 4 106 0 1 742 25 0 0 0 chr2L 20638967 20638992 -2372552 + AT_rich Low_complexity Low_complexity 1 25 0 1 742 331 243 8 86 chr2L 20639591 20639708 -2371836 - DNAREP1_DM LINE Penelope -486 108 1 1 742 24 67 0 0 chr2L 20640074 20640119 -2371425 + AT_rich Low_complexity Low_complexity 1 45 0 1 742 21 36 0 0 chr2L 20648816 20648844 -2362700 + AT_rich Low_complexity Low_complexity 1 28 0 1 742 21 0 0 0 chr2L 20648868 20648889 -2362655 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 21 36 0 0 chr2L 20661243 20661271 -2350273 + AT_rich Low_complexity Low_complexity 1 28 0 1 742 189 0 0 0 chr2L 20669739 20669760 -2341784 + (CTG)n Simple_repeat Simple_repeat 3 23 0 1 742 270 56 0 0 chr2L 20672612 20672648 -2338896 + (TCTG)n Simple_repeat Simple_repeat 3 38 0 1 742 33 56 0 0 chr2L 20682260 20682314 -2329230 + AT_rich Low_complexity Low_complexity 1 54 0 1 742 228 111 0 0 chr2L 20684226 20684262 -2327282 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1 742 224 154 19 0 chr2L 20685519 20685571 -2325973 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 742 199 0 65 0 chr2L 20685781 20685812 -2325732 + (TTATA)n Simple_repeat Simple_repeat 3 35 0 1 742 23 0 0 0 chr2L 20686246 20686269 -2325275 + AT_rich Low_complexity Low_complexity 1 23 0 1 742 183 220 0 0 chr2L 20688619 20688669 -2322875 + (TTG)n Simple_repeat Simple_repeat 1 50 0 1 742 453 103 0 0 chr2L 20688960 20689028 -2322516 + (CTG)n Simple_repeat Simple_repeat 1 68 0 1 742 351 209 0 28 chr2L 20689383 20689491 -2322053 - ROO_I LTR Pao -7518 738 634 1 742 183 42 0 0 chr2L 20690038 20690062 -2321482 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1 742 298 208 19 29 chr2L 20690191 20690295 -2321249 - ROO_I LTR Pao -7508 748 646 1 742 248 182 18 18 chr2L 20690309 20690365 -2321179 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 742 180 0 0 0 chr2L 20692155 20692175 -2319369 + (A)n Simple_repeat Simple_repeat 1 20 0 1 742 207 0 0 0 chr2L 20693477 20693500 -2318044 + (TCC)n Simple_repeat Simple_repeat 3 25 0 1 742 186 71 0 0 chr2L 20698102 20698130 -2313414 + (GTGTG)n Simple_repeat Simple_repeat 5 32 0 1 742 213 108 0 0 chr2L 20698498 20698535 -2313009 + (T)n Simple_repeat Simple_repeat 1 37 0 1 742 29 47 0 0 chr2L 20700701 20700744 -2310800 + AT_rich Low_complexity Low_complexity 1 43 0 1 742 212 171 0 0 chr2L 20702019 20702060 -2309484 + (GTTTG)n Simple_repeat Simple_repeat 3 43 0 1 742 198 0 0 0 chr2L 20705140 20705162 -2306382 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 742 264 100 0 0 chr2L 20706065 20706105 -2305439 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 742 24 0 0 0 chr2L 20707604 20707628 -2303916 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 302 129 0 16 chr2L 20708507 20708570 -2302974 + (TGG)n Simple_repeat Simple_repeat 1 62 0 1 743 186 133 0 0 chr2L 20709835 20709865 -2301679 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1 743 180 125 0 0 chr2L 20711105 20711137 -2300407 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 743 23 0 0 0 chr2L 20715612 20715635 -2295909 + AT_rich Low_complexity Low_complexity 1 23 0 1 743 201 210 0 0 chr2L 20717130 20717192 -2294352 + (TGG)n Simple_repeat Simple_repeat 1 62 0 1 743 180 0 0 0 chr2L 20717394 20717414 -2294130 + (CAAGC)n Simple_repeat Simple_repeat 4 23 0 1 743 201 74 0 0 chr2L 20717924 20717951 -2293593 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 1 743 33 43 0 0 chr2L 20719040 20719087 -2292457 + AT_rich Low_complexity Low_complexity 1 47 0 1 743 23 0 0 0 chr2L 20719733 20719756 -2291788 + AT_rich Low_complexity Low_complexity 1 23 0 1 743 23 33 0 0 chr2L 20720650 20720680 -2290864 + AT_rich Low_complexity Low_complexity 1 30 0 1 743 222 116 0 0 chr2L 20721872 20721915 -2289629 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 743 195 42 0 0 chr2L 20722048 20722072 -2289472 + (CAGAA)n Simple_repeat Simple_repeat 1 24 0 1 743 37 81 0 0 chr2L 20722436 20722522 -2289022 + AT_rich Low_complexity Low_complexity 1 86 0 1 743 213 132 0 0 chr2L 20723493 20723531 -2288013 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 743 21 0 0 0 chr2L 20726990 20727011 -2284533 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 25 0 0 0 chr2L 20727260 20727285 -2284259 + AT_rich Low_complexity Low_complexity 1 25 0 1 743 25 31 0 0 chr2L 20734420 20734452 -2277092 + AT_rich Low_complexity Low_complexity 1 32 0 1 743 238 220 17 60 chr2L 20740162 20740278 -2271266 + (CGAAA)n Simple_repeat Simple_repeat 3 113 0 1 743 3799 5 0 0 chr2L 20740302 20740719 -2270825 - TIRANT_LTR LTR Gypsy 0 417 1 1 743 38537 0 0 0 chr2L 20740719 20744901 -2266643 - TIRANT_I LTR Gypsy 0 7692 3511 1 743 26070 1 1 0 chr2L 20744892 20747702 -2263842 - TIRANT_I LTR Gypsy -4880 2812 1 1 743 3799 5 0 0 chr2L 20747702 20748119 -2263425 - TIRANT_LTR LTR Gypsy 0 417 1 1 743 25 0 0 0 chr2L 20748220 20748245 -2263299 + AT_rich Low_complexity Low_complexity 1 25 0 1 743 28 29 0 0 chr2L 20757924 20757959 -2253585 + AT_rich Low_complexity Low_complexity 1 35 0 1 743 180 0 0 0 chr2L 20759064 20759084 -2252460 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 743 23 33 0 0 chr2L 20762164 20762194 -2249350 + AT_rich Low_complexity Low_complexity 1 30 0 1 743 29 28 0 0 chr2L 20769600 20769636 -2241908 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 316 106 0 43 chr2L 20771748 20771817 -2239727 + (CAA)n Simple_repeat Simple_repeat 1 66 0 1 743 25 75 0 0 chr2L 20773261 20773314 -2238230 + AT_rich Low_complexity Low_complexity 1 53 0 1 743 210 71 0 0 chr2L 20774393 20774421 -2237123 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 743 201 39 0 0 chr2L 20776191 20776217 -2235327 + (G)n Simple_repeat Simple_repeat 1 26 0 1 743 186 43 0 0 chr2L 20777087 20777110 -2234434 + (CTCG)n Simple_repeat Simple_repeat 2 24 0 1 743 306 0 0 0 chr2L 20777407 20777441 -2234103 + (GGA)n Simple_repeat Simple_repeat 2 35 0 1 743 205 182 0 0 chr2L 20782362 20782406 -2229138 + GA-rich Low_complexity Low_complexity 2 45 0 1 743 201 74 0 0 chr2L 20784545 20784572 -2226972 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 743 22 35 0 0 chr2L 20785172 20785201 -2226343 + AT_rich Low_complexity Low_complexity 1 29 0 1 743 186 167 0 0 chr2L 20788273 20788309 -2223235 + (CATA)n Simple_repeat Simple_repeat 2 37 0 1 743 21 36 0 0 chr2L 20793548 20793576 -2217968 + AT_rich Low_complexity Low_complexity 1 28 0 1 743 36 23 0 0 chr2L 20795267 20795310 -2216234 + AT_rich Low_complexity Low_complexity 1 43 0 1 743 21 57 0 0 chr2L 20797255 20797290 -2214254 + AT_rich Low_complexity Low_complexity 1 35 0 1 743 331 216 20 20 chr2L 20798175 20798274 -2213270 + (CAA)n Simple_repeat Simple_repeat 1 99 0 1 743 23 0 0 0 chr2L 20801623 20801646 -2209898 + AT_rich Low_complexity Low_complexity 1 23 0 1 743 204 40 0 0 chr2L 20802605 20802630 -2208914 + (CAA)n Simple_repeat Simple_repeat 1 25 0 1 743 23 54 0 0 chr2L 20804315 20804352 -2207192 + AT_rich Low_complexity Low_complexity 1 37 0 1 743 21 0 0 0 chr2L 20805220 20805241 -2206303 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 189 74 0 0 chr2L 20806791 20806818 -2204726 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 1 743 27 49 0 0 chr2L 20808409 20808450 -2203094 + AT_rich Low_complexity Low_complexity 1 41 0 1 743 320 94 19 0 chr2L 20809932 20809985 -2201559 + (CAG)n Simple_repeat Simple_repeat 3 56 0 1 743 206 233 0 0 chr2L 20810405 20810448 -2201096 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1 743 189 74 0 0 chr2L 20812699 20812726 -2198818 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 743 21 36 0 0 chr2L 20819828 20819856 -2191688 + AT_rich Low_complexity Low_complexity 1 28 0 1 743 316 196 0 0 chr2L 20819990 20820046 -2191498 - DNAREP1_DM LINE Penelope -538 56 1 1 743 22 0 0 0 chr2L 20824639 20824661 -2186883 + AT_rich Low_complexity Low_complexity 1 22 0 1 743 231 88 0 0 chr2L 20825360 20825394 -2186150 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1 743 316 204 67 11 chr2L 20828577 20828666 -2182878 - DNAREP1_DM LINE Penelope -1 593 500 1 743 324 174 100 44 chr2L 20828740 20828830 -2182714 + DNAREP1_DM LINE Penelope 320 414 -180 1 743 23 86 0 0 chr2L 20829365 20829423 -2182121 + AT_rich Low_complexity Low_complexity 1 58 0 1 743 23 0 0 0 chr2L 20830254 20830277 -2181267 + AT_rich Low_complexity Low_complexity 1 23 0 1 743 23 0 0 0 chr2L 20834621 20834644 -2176900 + AT_rich Low_complexity Low_complexity 1 23 0 1 743 6037 1 0 1 chr2L 20835863 20836522 -2175022 - QUASIMODO_LTR LTR Gypsy 0 658 1 1 743 564 184 218 26 chr2L 20838311 20838467 -2173077 - DNAREP1_DM LINE Penelope 0 594 409 1 744 234 191 0 0 chr2L 20843779 20843821 -2167723 + TRANSIB2 DNA Transib 2528 2569 -275 1 744 21 36 0 0 chr2L 20844620 20844648 -2166896 + AT_rich Low_complexity Low_complexity 1 28 0 1 744 29 0 0 0 chr2L 20847638 20847667 -2163877 + AT_rich Low_complexity Low_complexity 1 29 0 1 744 21 0 0 0 chr2L 20850282 20850303 -2161241 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 22 35 0 0 chr2L 20858869 20858898 -2152646 + AT_rich Low_complexity Low_complexity 1 29 0 1 744 213 139 28 0 chr2L 20861040 20861076 -2150468 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1 744 342 164 0 0 chr2L 20864804 20864859 -2146685 + DNAREP1_DM LINE Penelope 2 56 -538 1 744 467 195 0 0 chr2L 20864997 20865079 -2146465 + DNAREP1_DM LINE Penelope 512 593 -1 1 744 22 0 0 0 chr2L 20866624 20866646 -2144898 + AT_rich Low_complexity Low_complexity 1 22 0 1 744 198 103 0 0 chr2L 20869736 20869765 -2141779 + (CAGGG)n Simple_repeat Simple_repeat 4 32 0 1 744 27 0 0 0 chr2L 20871323 20871350 -2140194 + AT_rich Low_complexity Low_complexity 1 27 0 1 744 30 69 0 0 chr2L 20871399 20871457 -2140087 + AT_rich Low_complexity Low_complexity 1 58 0 1 744 23 54 0 0 chr2L 20871521 20871558 -2139986 + AT_rich Low_complexity Low_complexity 1 37 0 1 744 216 0 0 0 chr2L 20875590 20875614 -2135930 + (GAGTG)n Simple_repeat Simple_repeat 4 27 0 1 744 204 267 0 0 chr2L 20878088 20878133 -2133411 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 744 208 188 0 20 chr2L 20881767 20881816 -2129728 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 744 36 53 0 0 chr2L 20888439 20888496 -2123048 + AT_rich Low_complexity Low_complexity 1 57 0 1 744 183 80 0 0 chr2L 20888788 20888813 -2122731 + (CGAT)n Simple_repeat Simple_repeat 2 26 0 1 744 26 50 0 0 chr2L 20891144 20891184 -2120360 + AT_rich Low_complexity Low_complexity 1 40 0 1 744 43733 4 0 1 chr2L 20891617 20896634 -2114910 - LINEJ1_DM LINE Jockey 0 5020 7 1 744 33 56 0 0 chr2L 20897816 20897870 -2113674 + AT_rich Low_complexity Low_complexity 1 54 0 1 744 26 0 0 0 chr2L 20897983 20898009 -2113535 + AT_rich Low_complexity Low_complexity 1 26 0 1 744 208 122 0 58 chr2L 20898474 20898526 -2113018 + A-rich Low_complexity Low_complexity 1 49 0 1 744 29 0 0 0 chr2L 20899099 20899128 -2112416 + AT_rich Low_complexity Low_complexity 1 29 0 1 744 242 167 104 15 chr2L 20900014 20900081 -2111463 - DNAREP1_DM LINE Penelope -262 332 260 1 744 1142 75 108 41 chr2L 20900716 20900911 -2110633 - DNAREP1_DM LINE Penelope -3 591 384 1 744 726 88 23 2 chr2L 20901000 20901129 -2110415 - DNAREP1_DM LINE Penelope -199 395 280 1 744 8905 19 4 3 chr2L 20901512 20902616 -2108928 - PROTOP_A DNA P 0 1105 1 1 744 22 56 0 0 chr2L 20903380 20903416 -2108128 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 34 79 0 0 chr2L 20904010 20904086 -2107458 + AT_rich Low_complexity Low_complexity 1 76 0 1 744 27 0 0 0 chr2L 20908244 20908271 -2103273 + AT_rich Low_complexity Low_complexity 1 27 0 1 744 180 0 0 0 chr2L 20909431 20909451 -2102093 + (A)n Simple_repeat Simple_repeat 1 20 0 1 744 204 217 0 21 chr2L 20912792 20912839 -2098705 + (TTCGG)n Simple_repeat Simple_repeat 4 49 0 1 744 460 180 9 26 chr2L 20914765 20914879 -2096665 - DNAREP1_DM LINE Penelope -482 112 1 1 744 23 54 0 0 chr2L 20916368 20916405 -2095139 + AT_rich Low_complexity Low_complexity 1 37 0 1 744 235 275 7 66 chr2L 20916918 20917070 -2094474 + T-rich Low_complexity Low_complexity 4 146 0 1 744 32 26 0 0 chr2L 20917354 20917393 -2094151 + AT_rich Low_complexity Low_complexity 1 39 0 1 744 2692 117 78 21 chr2L 20923098 20923612 -2087932 - DNAREP1_DM LINE Penelope -51 543 1 1 744 27 29 0 0 chr2L 20924768 20924802 -2086742 + AT_rich Low_complexity Low_complexity 1 34 0 1 744 26 30 0 0 chr2L 20925190 20925223 -2086321 + AT_rich Low_complexity Low_complexity 1 33 0 1 744 22 0 0 0 chr2L 20926889 20926911 -2084633 + AT_rich Low_complexity Low_complexity 1 22 0 1 744 2017 133 215 12 chr2L 20928119 20928613 -2082931 - DNAREP1_DM LINE Penelope 0 594 1 1 744 21 0 0 0 chr2L 20928753 20928774 -2082770 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 291 0 0 0 chr2L 20929425 20929459 -2082085 - DNAREP1_DM LINE Penelope -560 34 1 1 744 25 0 0 0 chr2L 20933189 20933214 -2078330 + AT_rich Low_complexity Low_complexity 1 25 0 1 744 26 30 0 0 chr2L 20933687 20933720 -2077824 + AT_rich Low_complexity Low_complexity 1 33 0 1 744 353 167 0 0 chr2L 20935141 20935201 -2076343 + DNAREP1_DM LINE Penelope 1 60 -534 1 744 22 0 0 0 chr2L 20939236 20939258 -2072286 + AT_rich Low_complexity Low_complexity 1 22 0 1 744 200 227 29 43 chr2L 20939515 20939584 -2071960 + (TTTCG)n Simple_repeat Simple_repeat 1 68 0 1 744 24 0 0 0 chr2L 20939780 20939804 -2071740 + AT_rich Low_complexity Low_complexity 1 24 0 1 744 21 0 0 0 chr2L 20940182 20940203 -2071341 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 204 288 0 14 chr2L 20940476 20940550 -2070994 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 744 22 56 0 0 chr2L 20940859 20940895 -2070649 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 219 88 0 0 chr2L 20941329 20941363 -2070181 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 744 28 61 0 0 chr2L 20941659 20941708 -2069836 + AT_rich Low_complexity Low_complexity 1 49 0 1 744 249 33 0 0 chr2L 20942419 20942449 -2069095 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 744 27 0 0 0 chr2L 20944604 20944631 -2066913 + AT_rich Low_complexity Low_complexity 1 27 0 1 744 192 163 0 0 chr2L 20945091 20945134 -2066410 + CT-rich Low_complexity Low_complexity 2 44 0 1 744 264 130 0 0 chr2L 20947310 20947356 -2064188 + (ATG)n Simple_repeat Simple_repeat 1 46 0 1 744 192 77 0 0 chr2L 20950594 20950620 -2060924 + (TCTCG)n Simple_repeat Simple_repeat 2 27 0 1 744 241 218 25 25 chr2L 20952481 20952561 -2058983 + (CTG)n Simple_repeat Simple_repeat 3 82 0 1 744 216 97 0 0 chr2L 20953253 20953284 -2058260 + (TTG)n Simple_repeat Simple_repeat 1 31 0 1 744 34 0 0 0 chr2L 20954693 20954727 -2056817 + AT_rich Low_complexity Low_complexity 1 34 0 1 744 23 33 0 0 chr2L 20955712 20955742 -2055802 + AT_rich Low_complexity Low_complexity 1 30 0 1 744 217 246 35 0 chr2L 20957311 20957368 -2054176 + (CAG)n Simple_repeat Simple_repeat 3 61 0 1 744 24 53 0 0 chr2L 20959511 20959549 -2051995 + AT_rich Low_complexity Low_complexity 1 38 0 1 744 206 241 0 0 chr2L 20959775 20959829 -2051715 + (CAGT)n Simple_repeat Simple_repeat 2 55 0 1 744 210 118 0 0 chr2L 20960470 20960504 -2051040 + (AGTTG)n Simple_repeat Simple_repeat 1 34 0 1 744 180 0 0 0 chr2L 20961698 20961718 -2049826 + (ACTCG)n Simple_repeat Simple_repeat 2 21 0 1 744 25 65 0 0 chr2L 20962937 20962983 -2048561 + AT_rich Low_complexity Low_complexity 1 46 0 1 744 22 35 0 0 chr2L 20965518 20965547 -2045997 + AT_rich Low_complexity Low_complexity 1 29 0 1 744 225 0 0 0 chr2L 20966756 20966781 -2044763 + (A)n Simple_repeat Simple_repeat 1 25 0 1 744 21 36 0 0 chr2L 20969952 20969980 -2041564 + AT_rich Low_complexity Low_complexity 1 28 0 1 744 365 70 18 0 chr2L 20970941 20970998 -2040546 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 745 189 0 0 0 chr2L 20971941 20971962 -2039582 + (T)n Simple_repeat Simple_repeat 1 21 0 1 745 23 33 0 0 chr2L 20975686 20975716 -2035828 + AT_rich Low_complexity Low_complexity 1 30 0 1 745 43842 3 0 0 chr2L 20976716 20981424 -2030120 + BS2 LINE Jockey 14 4721 0 1 745 198 0 0 0 chr2L 20981430 20981452 -2030092 + (A)n Simple_repeat Simple_repeat 1 22 0 1 745 269 140 35 0 chr2L 20982036 20982093 -2029451 + ROO_I LTR Pao 680 738 -7518 1 745 204 40 0 0 chr2L 20982622 20982647 -2028897 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 745 202 139 70 0 chr2L 20983538 20983581 -2027963 + A-rich Low_complexity Low_complexity 2 47 0 1 745 307 113 16 16 chr2L 20986356 20986419 -2025125 + (TGGA)n Simple_repeat Simple_repeat 4 66 0 1 745 210 219 0 0 chr2L 20987977 20988018 -2023526 + (CGA)n Simple_repeat Simple_repeat 2 42 0 1 745 25 0 0 0 chr2L 20990416 20990441 -2021103 + AT_rich Low_complexity Low_complexity 1 25 0 1 745 216 0 0 0 chr2L 20991209 20991233 -2020311 + (CATTC)n Simple_repeat Simple_repeat 3 26 0 1 745 28 48 0 0 chr2L 20991695 20991737 -2019807 + AT_rich Low_complexity Low_complexity 1 42 0 1 745 218 106 20 41 chr2L 20994871 20994920 -2016624 + (CAA)n Simple_repeat Simple_repeat 3 50 0 1 745 25 31 0 0 chr2L 20997525 20997557 -2013987 + AT_rich Low_complexity Low_complexity 1 32 0 1 745 204 67 0 0 chr2L 20998077 20998107 -2013437 + (TTTCG)n Simple_repeat Simple_repeat 3 32 0 1 745 306 197 341 74 chr2L 20998552 20998687 -2012857 - DNAREP1_DM LINE Penelope -2 592 422 1 745 207 310 0 27 chr2L 21000681 21000754 -2010790 + (TTGGGG)n Simple_repeat Simple_repeat 1 71 0 1 745 24 0 0 0 chr2L 21003070 21003094 -2008450 + AT_rich Low_complexity Low_complexity 1 24 0 1 745 28 95 0 0 chr2L 21005566 21005650 -2005894 + AT_rich Low_complexity Low_complexity 1 84 0 1 745 327 65 0 0 chr2L 21007016 21007062 -2004482 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 745 183 139 0 0 chr2L 21007265 21007301 -2004243 + (CATAC)n Simple_repeat Simple_repeat 2 37 0 1 745 210 71 0 0 chr2L 21009982 21010010 -2001534 + (CGGTG)n Simple_repeat Simple_repeat 4 31 0 1 745 28 0 0 0 chr2L 21010898 21010926 -2000618 + AT_rich Low_complexity Low_complexity 1 28 0 1 745 216 67 0 0 chr2L 21011829 21011859 -1999685 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 745 21 71 0 0 chr2L 21013430 21013472 -1998072 + AT_rich Low_complexity Low_complexity 1 42 0 1 745 21 82 0 0 chr2L 21014237 21014286 -1997258 + AT_rich Low_complexity Low_complexity 1 49 0 1 745 24 53 0 0 chr2L 21015010 21015048 -1996496 + AT_rich Low_complexity Low_complexity 1 38 0 1 745 192 77 0 0 chr2L 21015659 21015685 -1995859 + (CAGGG)n Simple_repeat Simple_repeat 3 28 0 1 745 221 242 0 15 chr2L 21016664 21016731 -1994813 + (CAG)n Simple_repeat Simple_repeat 1 66 0 1 745 211 259 0 0 chr2L 21019687 21019745 -1991799 + (CAG)n Simple_repeat Simple_repeat 3 60 0 1 745 215 260 26 0 chr2L 21019886 21019963 -1991581 + (CAA)n Simple_repeat Simple_repeat 2 80 0 1 745 31 0 0 0 chr2L 21020164 21020195 -1991349 + AT_rich Low_complexity Low_complexity 1 31 0 1 745 12924 132 178 34 chr2L 21020332 21022239 -1989305 + FB4_DM DNA Tc1 1 2330 -1759 1 745 305 24 24 0 chr2L 21022239 21022281 -1989263 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 745 12924 132 178 34 chr2L 21022281 21023947 -1987597 + FB4_DM DNA Tc1 2331 4089 0 1 745 21 0 0 0 chr2L 21028697 21028718 -1982826 + AT_rich Low_complexity Low_complexity 1 21 0 1 745 25 65 0 0 chr2L 21028739 21028785 -1982759 + AT_rich Low_complexity Low_complexity 1 46 0 1 745 204 40 0 0 chr2L 21029218 21029243 -1982301 + (T)n Simple_repeat Simple_repeat 1 25 0 1 745 21 71 0 0 chr2L 21031329 21031371 -1980173 + AT_rich Low_complexity Low_complexity 1 42 0 1 745 348 24 0 0 chr2L 21032001 21032042 -1979502 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 745 241 102 0 58 chr2L 21036291 21036343 -1975201 + CT-rich Low_complexity Low_complexity 5 53 0 1 745 3198 15 48 0 chr2L 21041189 21041587 -1969957 + TIRANT_LTR LTR Gypsy 1 417 0 1 745 61634 3 0 4 chr2L 21041587 21048995 -1962549 + TIRANT_I LTR Gypsy 1 7692 0 1 745 3198 15 48 0 chr2L 21048995 21049393 -1962151 + TIRANT_LTR LTR Gypsy 1 417 0 1 745 21 57 0 0 chr2L 21049688 21049723 -1961821 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 273 151 0 0 chr2L 21050233 21050286 -1961258 + (TCCCG)n Simple_repeat Simple_repeat 4 56 0 1 745 223 246 0 0 chr2L 21051240 21051297 -1960247 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 745 217 252 38 28 chr2L 21051437 21051543 -1960001 + A-rich Low_complexity Low_complexity 6 112 0 1 745 228 185 0 0 chr2L 21051604 21051658 -1959886 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 745 24 32 0 0 chr2L 21052277 21052308 -1959236 + AT_rich Low_complexity Low_complexity 1 31 0 1 745 21 0 0 0 chr2L 21052427 21052448 -1959096 + AT_rich Low_complexity Low_complexity 1 21 0 1 745 29 0 0 0 chr2L 21054710 21054739 -1956805 + AT_rich Low_complexity Low_complexity 1 29 0 1 745 710 162 58 13 chr2L 21057273 21057429 -1954115 - DNAREP1_DM LINE Penelope -1 593 431 1 745 488 179 81 0 chr2L 21057443 21057566 -1953978 - DNAREP1_DM LINE Penelope -461 133 1 1 745 24 67 0 0 chr2L 21057711 21057756 -1953788 + AT_rich Low_complexity Low_complexity 1 45 0 1 745 207 69 0 0 chr2L 21063463 21063492 -1948052 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 745 22 0 0 0 chr2L 21065575 21065597 -1945947 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 1139 113 58 9 chr2L 21071728 21071952 -1939592 + DNAREP1_DM LINE Penelope 50 284 -310 1 745 27 62 0 0 chr2L 21073092 21073140 -1938404 + AT_rich Low_complexity Low_complexity 1 48 0 1 745 33 43 0 0 chr2L 21076700 21076747 -1934797 + AT_rich Low_complexity Low_complexity 1 47 0 1 745 24 0 0 0 chr2L 21077941 21077965 -1933579 + AT_rich Low_complexity Low_complexity 1 24 0 1 745 24 77 0 0 chr2L 21085969 21086021 -1925523 + AT_rich Low_complexity Low_complexity 1 52 0 1 745 180 77 0 0 chr2L 21089269 21089295 -1922249 + (TTAG)n Simple_repeat Simple_repeat 3 28 0 1 745 420 20 0 0 chr2L 21090904 21090953 -1920591 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 745 21 0 0 0 chr2L 21096780 21096801 -1914743 + AT_rich Low_complexity Low_complexity 1 21 0 1 745 30 0 0 0 chr2L 21100894 21100924 -1910620 + AT_rich Low_complexity Low_complexity 1 30 0 1 746 208 188 21 0 chr2L 21105568 21105616 -1905928 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 746 240 35 0 0 chr2L 21106560 21106589 -1904955 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 746 1265 95 108 27 chr2L 21108740 21108999 -1902545 - Transib-N1_DM DNA Transib -1 513 234 1 746 759 81 0 0 chr2L 21109085 21109196 -1902348 - Transib-N1_DM DNA Transib -403 111 1 1 746 314 185 12 0 chr2L 21109671 21109752 -1901792 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 746 23 68 0 0 chr2L 21110730 21110774 -1900770 + AT_rich Low_complexity Low_complexity 1 44 0 1 746 691 173 159 16 chr2L 21112117 21112299 -1899245 - DNAREP1_DM LINE Penelope -24 570 363 1 746 586 127 255 21 chr2L 21112353 21112498 -1899046 - DNAREP1_DM LINE Penelope -196 398 220 1 746 24 0 0 0 chr2L 21112601 21112625 -1898919 + AT_rich Low_complexity Low_complexity 1 24 0 1 746 24 0 0 0 chr2L 21113325 21113349 -1898195 + AT_rich Low_complexity Low_complexity 1 24 0 1 746 255 31 0 0 chr2L 21122172 21122204 -1889340 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 746 30 27 0 0 chr2L 21123190 21123227 -1888317 + AT_rich Low_complexity Low_complexity 1 37 0 1 746 290 154 0 13 chr2L 21130117 21130196 -1881348 + (CAA)n Simple_repeat Simple_repeat 1 78 0 1 746 34 0 0 0 chr2L 21131779 21131813 -1879731 + AT_rich Low_complexity Low_complexity 1 34 0 1 746 33 43 0 0 chr2L 21134566 21134613 -1876931 + AT_rich Low_complexity Low_complexity 1 47 0 1 746 22 35 0 0 chr2L 21135299 21135328 -1876216 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 22 35 0 0 chr2L 21141090 21141119 -1870425 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 24 0 0 0 chr2L 21143516 21143540 -1868004 + AT_rich Low_complexity Low_complexity 1 24 0 1 746 7404 91 84 38 chr2L 21149248 21150572 -1860972 - FB4_DM DNA Tc1 -1319 2770 1386 1 746 3501 50 165 6 chr2L 21150878 21151404 -1860140 - PROTOP_B DNA P -543 610 1 1 746 25 65 0 0 chr2L 21158755 21158801 -1852743 + AT_rich Low_complexity Low_complexity 1 46 0 1 746 215 93 23 0 chr2L 21163234 21163277 -1848267 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 746 213 282 12 12 chr2L 21163981 21164067 -1847477 + (ATG)n Simple_repeat Simple_repeat 3 88 0 1 746 24 53 0 0 chr2L 21172861 21172899 -1838645 + AT_rich Low_complexity Low_complexity 1 38 0 1 746 29 45 0 43 chr2L 21174392 21174461 -1837083 + AT_rich Low_complexity Low_complexity 1 66 0 1 746 30 45 0 0 chr2L 21178285 21178329 -1833215 + AT_rich Low_complexity Low_complexity 1 44 0 1 746 24 0 0 0 chr2L 21179754 21179778 -1831766 + AT_rich Low_complexity Low_complexity 1 24 0 1 746 26 30 0 0 chr2L 21179842 21179875 -1831669 + AT_rich Low_complexity Low_complexity 1 33 0 1 746 35 41 0 0 chr2L 21182453 21182502 -1829042 + AT_rich Low_complexity Low_complexity 1 49 0 1 746 23 33 0 0 chr2L 21192508 21192538 -1819006 + AT_rich Low_complexity Low_complexity 1 30 0 1 746 21 0 0 0 chr2L 21196003 21196024 -1815520 + AT_rich Low_complexity Low_complexity 1 21 0 1 746 255 61 0 0 chr2L 21196820 21196853 -1814691 + (ACTG)n Simple_repeat Simple_repeat 1 33 0 1 746 219 114 0 0 chr2L 21198214 21198249 -1813295 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 746 21 0 0 0 chr2L 21198276 21198297 -1813247 + AT_rich Low_complexity Low_complexity 1 21 0 1 746 1203 114 218 7 chr2L 21200382 21200759 -1810785 - DNAREP1_DM LINE Penelope -24 570 126 1 746 1310 144 96 9 chr2L 21200759 21201178 -1810366 - DNAREP1_DM LINE Penelope -263 331 2 1 746 24 53 0 0 chr2L 21201333 21201371 -1810173 + AT_rich Low_complexity Low_complexity 1 38 0 1 746 245 141 282 0 chr2L 21203337 21203408 -1808136 + DNAREP1_DM LINE Penelope 203 293 -301 1 746 2324 100 92 3 chr2L 21203396 21203766 -1807778 + DNAREP1_DM LINE Penelope 192 594 0 1 746 313 230 0 54 chr2L 21204807 21204899 -1806645 - DNAREP1_DM LINE Penelope -116 478 392 1 746 249 170 0 0 chr2L 21204897 21204944 -1806600 - DNAREP1_DM LINE Penelope -547 47 1 1 746 1277 146 85 15 chr2L 21204940 21205354 -1806190 - DNAREP1_DM LINE Penelope -28 566 1 1 746 1377 157 122 30 chr2L 21208252 21208587 -1802957 - DNAREP1_DM LINE Penelope -6 588 223 1 746 526 69 42 0 chr2L 21208595 21208667 -1802877 + Rehavkus-1_DY DNA Tc1 75 149 -5466 1 746 629 98 0 73 chr2L 21208663 21208773 -1802771 + Rehavkus-1_DY DNA Tc1 5647 5747 0 1 746 485 131 0 56 chr2L 21208798 21208887 -1802657 - DNAREP1_DM LINE Penelope -510 84 1 1 746 404 179 188 0 chr2L 21209402 21209514 -1802030 - DNAREP1_DM LINE Penelope -98 496 364 1 746 291 114 0 0 chr2L 21211567 21211611 -1799933 + (CAT)n Simple_repeat Simple_repeat 1 44 0 1 746 501 211 0 55 chr2L 21212047 21212177 -1799367 + DNAREP1_DM LINE Penelope 368 478 -116 1 746 33 0 0 0 chr2L 21212507 21212540 -1799004 + AT_rich Low_complexity Low_complexity 1 33 0 1 746 25 31 0 0 chr2L 21212582 21212614 -1798930 + AT_rich Low_complexity Low_complexity 1 32 0 1 746 26 30 0 0 chr2L 21213790 21213823 -1797721 + AT_rich Low_complexity Low_complexity 1 33 0 1 746 472 135 52 2 chr2L 21215517 21215613 -1795931 - DNAREP1_DM LINE Penelope -9 585 501 1 746 24 0 0 0 chr2L 21216060 21216084 -1795460 + AT_rich Low_complexity Low_complexity 1 24 0 1 746 247 336 0 0 chr2L 21223383 21223511 -1788033 + GA-rich Low_complexity Low_complexity 2 129 0 1 746 21 36 0 0 chr2L 21230466 21230494 -1781050 + AT_rich Low_complexity Low_complexity 1 28 0 1 746 22 0 0 0 chr2L 21230536 21230558 -1780986 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 280 222 0 79 chr2L 21232696 21232823 -1778721 + (CGGAG)n Simple_repeat Simple_repeat 2 118 0 1 746 249 291 0 105 chr2L 21233006 21233206 -1778338 + (CTGGGG)n Simple_repeat Simple_repeat 2 180 0 1 747 21 0 0 0 chr2L 21234152 21234173 -1777371 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 1314 57 83 5 chr2L 21236272 21236465 -1775079 + DNAREP1_DM LINE Penelope 387 594 0 1 747 23 33 0 0 chr2L 21241526 21241556 -1769988 + AT_rich Low_complexity Low_complexity 1 30 0 1 747 1181 129 107 45 chr2L 21241620 21242162 -1769382 + DNAREP1_DM LINE Penelope 2 508 -86 1 747 30 0 0 0 chr2L 21242318 21242348 -1769196 + AT_rich Low_complexity Low_complexity 1 30 0 1 747 22 35 0 0 chr2L 21243021 21243050 -1768494 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 253 170 0 0 chr2L 21243409 21243456 -1768088 - DNAREP1_DM LINE Penelope -35 559 513 1 747 240 59 0 0 chr2L 21244801 21244835 -1766709 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 747 208 143 0 0 chr2L 21248298 21248333 -1763211 + (A)n Simple_repeat Simple_repeat 1 35 0 1 747 192 152 0 0 chr2L 21248827 21248860 -1762684 + (CATA)n Simple_repeat Simple_repeat 3 35 0 1 747 444 288 41 41 chr2L 21249308 21249576 -1761968 - TC1-2_DM DNA Tc1 -264 1380 1113 1 747 408 250 23 29 chr2L 21249582 21249755 -1761789 - TC1-2_DM DNA Tc1 -685 959 788 1 747 21 0 0 0 chr2L 21252267 21252288 -1759256 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 186 98 39 19 chr2L 21252333 21252385 -1759159 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 1 747 22 0 0 0 chr2L 21252439 21252461 -1759083 + AT_rich Low_complexity Low_complexity 1 22 0 1 747 1070 145 301 4 chr2L 21252477 21252917 -1758627 + FB4_DM DNA Tc1 1644 2214 -1875 1 747 1124 113 35 28 chr2L 21252943 21253197 -1758347 + FB4_DM DNA Tc1 2500 2755 -1334 1 747 34 18 0 50 chr2L 21253411 21253471 -1758073 + AT_rich Low_complexity Low_complexity 1 57 0 1 747 182 167 0 36 chr2L 21255099 21255155 -1756389 + (CAG)n Simple_repeat Simple_repeat 2 55 0 1 747 24 32 0 0 chr2L 21255342 21255373 -1756171 + AT_rich Low_complexity Low_complexity 1 31 0 1 747 528 173 21 76 chr2L 21256605 21256749 -1754795 + DNAREP1_DM LINE Penelope 1 136 -458 1 747 916 87 101 0 chr2L 21256755 21256904 -1754640 + DNAREP1_DM LINE Penelope 431 594 0 1 747 216 196 0 0 chr2L 21258660 21258706 -1752838 + (TTA)n Simple_repeat Simple_repeat 3 48 0 1 747 250 143 163 0 chr2L 21259705 21259754 -1751790 - DNAREP1_DM LINE Penelope -24 570 514 1 747 1137 91 102 0 chr2L 21259809 21259985 -1751559 - DNAREP1_DM LINE Penelope -12 582 389 1 747 284 75 0 0 chr2L 21259983 21260023 -1751521 - DNAREP1_DM LINE Penelope -554 40 1 1 747 693 119 8 8 chr2L 21260065 21260192 -1751352 + DNAREP1_DM LINE Penelope 158 284 -310 1 747 192 77 0 0 chr2L 21260361 21260387 -1751157 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 747 252 197 208 25 chr2L 21260761 21260881 -1750663 - DNAREP1_DM LINE Penelope -243 351 210 1 747 502 162 10 0 chr2L 21265067 21265166 -1746378 - DNAREP1_DM LINE Penelope -154 440 341 1 747 594 156 28 56 chr2L 21265164 21265307 -1746237 - DNAREP1_DM LINE Penelope -454 140 2 1 747 271 237 21 71 chr2L 21265305 21265446 -1746098 + P_DG DNA P 2755 2888 0 1 747 1070 86 227 7 chr2L 21265446 21265653 -1745891 - DNAREP1_DM LINE Penelope -131 463 193 1 747 38 0 0 20 chr2L 21265674 21265710 -1745834 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 1090 18 41 12 chr2L 21265710 21265880 -1745664 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 1 747 38 0 0 20 chr2L 21265880 21265892 -1745652 + AT_rich Low_complexity Low_complexity 1 12 0 1 747 227 250 53 18 chr2L 21265902 21265914 -1745630 + P_DG DNA P 2742 2757 -131 1 747 496 162 94 0 chr2L 21265914 21266031 -1745513 - DNAREP1_DM LINE Penelope 0 594 467 1 747 504 249 302 11 chr2L 21266166 21266547 -1744997 - DNAREP1_DM LINE Penelope -102 492 1 1 747 27 0 0 0 chr2L 21267129 21267156 -1744388 + AT_rich Low_complexity Low_complexity 1 27 0 1 747 25 31 0 0 chr2L 21267183 21267215 -1744329 + AT_rich Low_complexity Low_complexity 1 32 0 1 747 977 44 103 0 chr2L 21267567 21267703 -1743841 - DNAREP1_DM LINE Penelope 0 594 445 1 747 1562 114 117 3 chr2L 21267702 21268000 -1743544 - DNAREP1_DM LINE Penelope -262 332 1 1 747 21 0 0 0 chr2L 21268312 21268333 -1743211 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 16424 39 15 6 chr2L 21268694 21270814 -1740730 - Baggins1 LINE LOA 0 5453 3315 1 747 3432 124 191 0 chr2L 21270838 21271575 -1739969 + DMCR1A LINE CR1 2384 3307 -1163 1 747 2744 120 66 19 chr2L 21271574 21272092 -1739452 + DMCR1A LINE CR1 3752 4293 -177 1 747 24 0 0 0 chr2L 21272115 21272139 -1739405 + AT_rich Low_complexity Low_complexity 1 24 0 1 747 337 73 109 0 chr2L 21272603 21272658 -1738886 + DNAREP1_DM LINE Penelope 1 61 -533 1 747 660 179 421 15 chr2L 21272692 21272976 -1738568 + DNAREP1_DM LINE Penelope 193 591 -3 1 747 533 196 77 40 chr2L 21274846 21275148 -1736396 - DNAREP1_DM LINE Penelope -148 446 4 1 747 29 0 0 0 chr2L 21279495 21279524 -1732020 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 25 51 0 0 chr2L 21281016 21281055 -1730489 + AT_rich Low_complexity Low_complexity 1 39 0 1 747 2547 107 117 2 chr2L 21284618 21285101 -1726443 + DNAREP1_DM LINE Penelope 1 594 0 1 747 322 245 129 7 chr2L 21284987 21285127 -1726417 - P_DG DNA P -3 2885 2729 1 747 436 158 158 0 chr2L 21285205 21285287 -1726257 + DNAREP1_DM LINE Penelope 431 525 -69 1 747 269 242 0 57 chr2L 21288397 21288502 -1723042 + (CTG)n Simple_repeat Simple_repeat 1 99 0 1 747 2907 87 170 10 chr2L 21289886 21290398 -1721146 + DNAREP1_DM LINE Penelope 1 594 0 1 747 22 0 0 0 chr2L 21293720 21293742 -1717802 + AT_rich Low_complexity Low_complexity 1 22 0 1 747 272 197 0 123 chr2L 21293866 21293947 -1717597 - DNAREP1_DM LINE Penelope -141 453 383 1 747 989 171 103 48 chr2L 21295529 21295781 -1715763 - DNAREP1_DM LINE Penelope -8 586 321 1 747 477 173 240 16 chr2L 21295945 21296074 -1715470 + DNAREP1_DM LINE Penelope 399 556 -38 1 747 25 0 0 0 chr2L 21298517 21298542 -1713002 + AT_rich Low_complexity Low_complexity 1 25 0 1 747 24 0 0 0 chr2L 21298767 21298791 -1712753 + AT_rich Low_complexity Low_complexity 1 24 0 1 747 491 200 55 53 chr2L 21298891 21299043 -1712501 - DNAREP1_DM LINE Penelope -103 491 368 1 747 452 194 139 0 chr2L 21299063 21299171 -1712373 - DNAREP1_DM LINE Penelope -32 562 440 1 747 320 221 0 0 chr2L 21299383 21299460 -1712084 - DNAREP1_DM LINE Penelope -516 78 2 1 747 1048 119 0 12 chr2L 21300034 21300195 -1711349 - DNAREP1_DM LINE Penelope -432 162 4 1 747 533 176 0 21 chr2L 21300446 21300539 -1711005 - DNAREP1_DM LINE Penelope -113 481 391 1 747 296 264 211 14 chr2L 21300615 21300757 -1710787 + DNAREP1_DM LINE Penelope 425 594 0 1 747 329 261 8 90 chr2L 21300982 21301104 -1710440 - DNAREP1_DM LINE Penelope -104 490 379 1 747 3278 79 66 75 chr2L 21302034 21302595 -1708949 + DNAREP1_DM LINE Penelope 2 557 -37 1 747 2103 92 131 22 chr2L 21302668 21303168 -1708376 - DNAREP1_DM LINE Penelope 0 594 1 1 747 22 35 0 0 chr2L 21304738 21304767 -1706777 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 29 0 0 0 chr2L 21304982 21305011 -1706533 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 23 0 0 0 chr2L 21305287 21305310 -1706234 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 28 61 0 0 chr2L 21305700 21305749 -1705795 + AT_rich Low_complexity Low_complexity 1 49 0 1 747 955 185 94 45 chr2L 21306034 21306553 -1704991 - DNAREP1_DM LINE Penelope -102 492 56 1 747 1687 108 164 8 chr2L 21306703 21307402 -1704142 + DNAREP1_DM LINE Penelope 1 564 -30 1 747 24 0 0 0 chr2L 21307546 21307570 -1703974 + AT_rich Low_complexity Low_complexity 1 24 0 1 747 180 0 0 0 chr2L 21309288 21309308 -1702236 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 747 438 196 295 0 chr2L 21312484 21312651 -1698893 - DNAREP1_DM LINE Penelope 0 594 379 1 747 27 49 0 0 chr2L 21314581 21314622 -1696922 + AT_rich Low_complexity Low_complexity 1 41 0 1 747 23 0 0 0 chr2L 21315432 21315455 -1696089 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 27 73 0 0 chr2L 21316179 21316234 -1695310 + AT_rich Low_complexity Low_complexity 1 55 0 1 747 203 83 83 0 chr2L 21316387 21316423 -1695121 + (TATAA)n Simple_repeat Simple_repeat 2 40 0 1 747 21 36 0 0 chr2L 21316449 21316477 -1695067 + AT_rich Low_complexity Low_complexity 1 28 0 1 747 28 86 0 0 chr2L 21316509 21316579 -1694965 + AT_rich Low_complexity Low_complexity 1 70 0 1 747 24 67 0 0 chr2L 21317331 21317376 -1694168 + AT_rich Low_complexity Low_complexity 1 45 0 1 747 1384 120 67 77 chr2L 21317490 21317789 -1693755 - DNAREP1_DM LINE Penelope -298 296 1 1 747 23 54 0 0 chr2L 21317930 21317967 -1693577 + AT_rich Low_complexity Low_complexity 1 37 0 1 747 29 0 0 0 chr2L 21318085 21318114 -1693430 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 21 36 0 0 chr2L 21320888 21320916 -1690628 + AT_rich Low_complexity Low_complexity 1 28 0 1 747 325 211 21 0 chr2L 21322619 21322714 -1688830 + DNAREP1_DM LINE Penelope 182 278 -316 1 747 212 0 36 0 chr2L 21323463 21323491 -1688053 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 747 249 88 0 0 chr2L 21325156 21325190 -1686354 - Invader4_LTR LTR Gypsy 0 346 313 1 747 251 35 0 0 chr2L 21325187 21325216 -1686328 - Invader4_LTR LTR Gypsy -317 29 1 1 747 826 102 308 35 chr2L 21325237 21325486 -1686058 + DNAREP1_DM LINE Penelope 1 317 -277 1 747 23 68 0 0 chr2L 21326594 21326638 -1684906 + AT_rich Low_complexity Low_complexity 1 44 0 1 747 297 129 53 11 chr2L 21328177 21328271 -1683273 + (TA)n Simple_repeat Simple_repeat 2 99 0 1 747 835 166 85 61 chr2L 21329745 21329957 -1681587 - Transib-N1_DM DNA Transib 0 514 298 1 747 407 189 45 9 chr2L 21329974 21330086 -1681458 - Transib-N1_DM DNA Transib -276 238 123 1 747 2261 102 118 77 chr2L 21330200 21330665 -1680879 - DNAREP1_DM LINE Penelope 0 594 111 1 747 361 47 0 0 chr2L 21330682 21330725 -1680819 - DNAREP1_DM LINE Penelope -551 43 1 1 747 569 143 0 9 chr2L 21330823 21330929 -1680615 - Transib-N1_DM DNA Transib -408 106 2 1 747 1103 136 304 10 chr2L 21334173 21334486 -1677058 - FB4_DM DNA Tc1 -3684 405 1 1 747 1187 169 89 36 chr2L 21334486 21334776 -1676768 - DNAREP1_DM LINE Penelope -188 406 2 1 747 1296 68 79 46 chr2L 21335412 21335628 -1675916 + DNAREP1_DM LINE Penelope 1 223 -371 1 747 25 0 0 0 chr2L 21335729 21335754 -1675790 + AT_rich Low_complexity Low_complexity 1 25 0 1 747 249 67 0 0 chr2L 21336254 21336284 -1675260 - G5A_DM LINE Jockey -2035 806 777 1 747 2300 70 291 5 chr2L 21336290 21336893 -1674651 + G5A_DM LINE Jockey 748 1597 -1244 1 747 2084 35 58 8 chr2L 21336897 21337335 -1674209 + G5A_DM LINE Jockey 1899 2425 -416 1 747 971 116 116 0 chr2L 21337326 21337490 -1674054 + DNAREP1_DM LINE Penelope 377 559 -35 1 747 237 206 9 76 chr2L 21337526 21337631 -1673913 + (TTTA)n Simple_repeat Simple_repeat 4 101 0 1 747 513 80 40 0 chr2L 21337836 21337911 -1673633 + DNAREP1_DM LINE Penelope 500 577 -17 1 747 3544 15 0 0 chr2L 21337908 21338309 -1673235 - BS LINE Jockey -2 5124 4724 1 747 940 127 0 25 chr2L 21338664 21338825 -1672719 + DNAREP1_DM LINE Penelope 4 160 -434 1 747 24 0 0 0 chr2L 21339022 21339046 -1672498 + AT_rich Low_complexity Low_complexity 1 24 0 1 747 25 31 0 0 chr2L 21340544 21340576 -1670968 + AT_rich Low_complexity Low_complexity 1 32 0 1 747 1430 175 34 2 chr2L 21342991 21343401 -1668143 - DNAREP1_DM LINE Penelope -262 332 1 1 747 359 137 41 31 chr2L 21343476 21343574 -1667970 - FB4_DM DNA Tc1 -1385 2704 2606 1 747 956 79 101 0 chr2L 21343574 21343713 -1667831 - DNAREP1_DM LINE Penelope -3 591 439 1 747 29 0 0 0 chr2L 21345610 21345639 -1665905 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 314 218 126 0 chr2L 21345691 21345778 -1665766 - DNAREP1_DM LINE Penelope -7 587 490 1 747 202 206 0 0 chr2L 21346073 21346107 -1665437 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 747 805 134 180 6 chr2L 21346125 21346297 -1665247 - DNAREP1_DM LINE Penelope -137 457 256 1 747 919 94 0 104 chr2L 21346328 21346482 -1665062 - DNAREP1_DM LINE Penelope -116 478 341 1 747 2731 78 208 12 chr2L 21346537 21347033 -1664511 - DNAREP1_DM LINE Penelope 0 594 2 1 747 858 178 72 63 chr2L 21347028 21347250 -1664294 - DNAREP1_DM LINE Penelope -348 246 23 1 747 3686 0 0 0 chr2L 21347604 21348003 -1663541 + BLOOD_LTR LTR Gypsy 1 399 0 1 747 58975 0 0 1 chr2L 21348003 21354620 -1656924 + BLOOD_I LTR Gypsy 1 6613 0 1 747 3686 0 0 0 chr2L 21354620 21355019 -1656525 + BLOOD_LTR LTR Gypsy 1 399 0 1 747 26 98 0 0 chr2L 21355066 21355148 -1656396 + AT_rich Low_complexity Low_complexity 1 82 0 1 747 40 83 0 0 chr2L 21355968 21356064 -1655480 + AT_rich Low_complexity Low_complexity 1 96 0 1 747 34 0 0 0 chr2L 21356942 21356976 -1654568 + AT_rich Low_complexity Low_complexity 1 34 0 1 747 23 0 0 0 chr2L 21357108 21357131 -1654413 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 25 65 0 0 chr2L 21358250 21358296 -1653248 + AT_rich Low_complexity Low_complexity 1 46 0 1 747 1679 151 136 3 chr2L 21358335 21358688 -1652856 - DNAREP1_DM LINE Penelope -31 563 164 1 747 1337 113 20 0 chr2L 21358799 21358994 -1652550 + Mariner2_DM DNA Tc1 40 238 -674 1 747 2929 258 114 13 chr2L 21359026 21360012 -1651532 - BS2 LINE Jockey -1158 3563 2479 1 747 578 270 13 0 chr2L 21360033 21360192 -1651352 - BS2 LINE Jockey -2332 2389 2229 1 747 24 0 0 0 chr2L 21361325 21361349 -1650195 + AT_rich Low_complexity Low_complexity 1 24 0 1 747 368 189 14 0 chr2L 21362294 21362368 -1649176 - DNAREP1_DM LINE Penelope -5 589 515 1 747 273 164 66 0 chr2L 21362419 21362480 -1649064 + DNAREP1_DM LINE Penelope 149 213 -381 1 747 35 0 0 0 chr2L 21362550 21362585 -1648959 + AT_rich Low_complexity Low_complexity 1 35 0 1 747 605 82 12 12 chr2L 21362962 21363048 -1648496 + DNAREP1_DM LINE Penelope 3 88 -506 1 747 367 62 0 0 chr2L 21363146 21363194 -1648350 + DNAREP1_DM LINE Penelope 137 184 -410 1 747 503 97 339 0 chr2L 21363193 21363322 -1648222 + DNAREP1_DM LINE Penelope 422 594 0 1 748 23 0 0 0 chr2L 21367245 21367268 -1644276 + AT_rich Low_complexity Low_complexity 1 23 0 1 748 21 0 0 0 chr2L 21367632 21367653 -1643891 + AT_rich Low_complexity Low_complexity 1 21 0 1 748 1055 82 446 2 chr2L 21370283 21370690 -1640854 + DNAREP1_DM LINE Penelope 8 594 0 1 748 338 191 23 45 chr2L 21370612 21370700 -1640844 - P_DG DNA P -54 2834 2749 1 748 410 215 11 0 chr2L 21370812 21370905 -1640639 + DNAREP1_DM LINE Penelope 500 593 -1 1 748 267 173 39 0 chr2L 21371036 21371088 -1640456 - DNAREP1_DM LINE Penelope -106 488 435 1 748 832 168 54 15 chr2L 21371546 21371769 -1639775 + DNAREP1_DM LINE Penelope 2 258 -336 1 748 625 120 148 0 chr2L 21371774 21371882 -1639662 + DNAREP1_DM LINE Penelope 437 560 -34 1 748 230 170 0 21 chr2L 21373091 21373139 -1638405 + BARI_DM DNA Tc1 1176 1222 -506 1 748 298 116 0 0 chr2L 21373799 21373842 -1637702 + DNAREP1_DM LINE Penelope 2 44 -550 1 748 21 36 0 0 chr2L 21376380 21376408 -1635136 + AT_rich Low_complexity Low_complexity 1 28 0 1 748 653 91 115 98 chr2L 21377620 21377742 -1633802 - DNAREP1_DM LINE Penelope -64 530 407 1 748 802 144 11 70 chr2L 21377795 21377982 -1633562 - DNAREP1_DM LINE Penelope -333 261 86 1 748 391 144 61 82 chr2L 21378353 21378451 -1633093 - DNAREP1_DM LINE Penelope 0 594 499 1 748 577 171 74 15 chr2L 21378910 21379074 -1632470 - DNAREP1_DM LINE Penelope -262 332 88 1 748 269 26 26 0 chr2L 21379084 21379122 -1632422 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 748 264 62 0 0 chr2L 21379140 21379172 -1632372 + DNAREP1_DM LINE Penelope 409 440 -154 1 748 702 82 0 0 chr2L 21379187 21379284 -1632260 + DNAREP1_DM LINE Penelope 496 592 -2 1 748 32 26 0 0 chr2L 21381978 21382017 -1629527 + AT_rich Low_complexity Low_complexity 1 39 0 1 748 25 0 0 0 chr2L 21382067 21382092 -1629452 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 21 0 0 0 chr2L 21382581 21382602 -1628942 + AT_rich Low_complexity Low_complexity 1 21 0 1 748 674 80 0 0 chr2L 21383342 21383430 -1628114 + DNAREP1_DM LINE Penelope 27 114 -480 1 748 228 37 0 0 chr2L 21383483 21383510 -1628034 - DNAREP1_DM LINE Penelope 0 594 568 1 748 235 98 0 68 chr2L 21383500 21383544 -1628000 - PROTOP_A DNA P -556 549 509 1 748 2353 97 107 161 chr2L 21383544 21384122 -1627422 - DNAREP1_DM LINE Penelope -20 574 28 1 748 291 200 17 0 chr2L 21384320 21384380 -1627164 - DNAREP1_DM LINE Penelope -532 62 2 1 748 34 79 0 0 chr2L 21384678 21384754 -1626790 + AT_rich Low_complexity Low_complexity 1 76 0 1 748 201 85 85 0 chr2L 21385579 21385626 -1625918 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 748 404 238 402 16 chr2L 21385795 21386086 -1625458 + M4DM DNA Transib 1 404 -1031 1 748 233 324 43 35 chr2L 21386137 21386278 -1625266 - TRANSIB1 DNA Transib -691 2323 2182 1 748 232 215 104 30 chr2L 21386559 21386626 -1624918 - TRANSIB2 DNA Transib -927 1917 1846 1 748 27 29 0 0 chr2L 21387783 21387817 -1623727 + AT_rich Low_complexity Low_complexity 1 34 0 1 748 34 0 0 0 chr2L 21388856 21388890 -1622654 + AT_rich Low_complexity Low_complexity 1 34 0 1 748 236 30 30 0 chr2L 21390330 21390363 -1621181 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 748 22 0 0 0 chr2L 21391192 21391214 -1620330 + AT_rich Low_complexity Low_complexity 1 22 0 1 748 22 80 0 0 chr2L 21391587 21391637 -1619907 + AT_rich Low_complexity Low_complexity 1 50 0 1 748 25 0 0 0 chr2L 21392155 21392180 -1619364 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 25 0 0 0 chr2L 21392193 21392218 -1619326 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 26 64 0 0 chr2L 21393130 21393177 -1618367 + AT_rich Low_complexity Low_complexity 1 47 0 1 748 745 76 75 17 chr2L 21393497 21393617 -1617927 + FB4_DM DNA Tc1 1 127 -3962 1 748 502 0 64 0 chr2L 21393892 21393970 -1617574 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 748 1316 50 206 3 chr2L 21394627 21395005 -1616539 - PROTOP_B DNA P 0 1153 699 1 748 1055 101 0 6 chr2L 21395008 21395164 -1616380 - I_DM LINE I -4073 2158 2004 1 748 1719 86 39 12 chr2L 21395164 21395423 -1616121 + Invader2_LTR LTR Gypsy 1 266 0 1 748 2210 55 3 0 chr2L 21395423 21395730 -1615814 - I_DM LINE I -4224 2007 1700 1 748 5363 57 117 18 chr2L 21395768 21396586 -1614958 - S2_DM DNA Tc1 -836 899 1 1 748 4993 68 27 5 chr2L 21397181 21397842 -1613702 + G5_DM LINE Jockey 54 729 -4127 1 748 4004 33 21 0 chr2L 21397821 21398306 -1613238 + G5_DM LINE Jockey 886 1380 -3476 1 748 7568 32 70 0 chr2L 21398303 21399434 -1612110 + G5_DM LINE Jockey 1805 3014 -1842 1 748 3648 26 112 0 chr2L 21399427 21399884 -1611660 + G5_DM LINE Jockey 4349 4856 0 1 748 260 98 98 0 chr2L 21401220 21401271 -1610273 + PROTOP_A DNA P 508 563 -542 1 748 728 172 0 0 chr2L 21401412 21401540 -1610004 + FW_DM LINE Jockey 600 727 -3965 1 748 6120 43 41 28 chr2L 21401542 21402398 -1609146 + PROTOP_A DNA P 3 869 -236 1 748 2347 99 31 8 chr2L 21402396 21402754 -1608790 + FW_DM LINE Jockey 1799 2164 -2528 1 748 1937 39 151 0 chr2L 21402746 21403071 -1608473 - G5_DM LINE Jockey -93 4763 4390 1 748 3889 0 0 7 chr2L 21403090 21403521 -1608023 + ROO_LTR LTR Pao 1 428 0 1 748 186 71 0 0 chr2L 21403743 21403771 -1607773 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 1 748 27 29 0 0 chr2L 21403845 21403879 -1607665 + AT_rich Low_complexity Low_complexity 1 34 0 1 748 455 92 0 0 chr2L 21405608 21405673 -1605871 - DNAREP1_DM LINE Penelope -2 592 528 1 748 360 77 0 0 chr2L 21406164 21406216 -1605328 - ALUII_DM Unknown Unknown -1 239 188 1 748 4899 17 3 18 chr2L 21406235 21406838 -1604706 - IDEFIX_LTR LTR Gypsy 0 594 1 1 748 15177 35 34 2 chr2L 21406838 21408814 -1602730 - IDEFIX_I LTR Gypsy 0 5628 3590 1 748 26756 20 28 1 chr2L 21408809 21413149 -1598395 - BS LINE Jockey -1 5125 669 1 748 1457 72 5 0 chr2L 21413143 21413350 -1598194 + I_DM LINE I 1800 2007 -4224 1 748 1668 90 39 12 chr2L 21413350 21413609 -1597935 - Invader2_LTR LTR Gypsy 0 266 1 1 748 5674 62 10 1 chr2L 21413609 21414381 -1597163 + I_DM LINE I 2004 2782 -3449 1 748 11969 66 1 4 chr2L 21414380 21415993 -1595551 + I_DM LINE I 3286 4892 -1339 1 748 1325 46 10 25 chr2L 21415985 21416185 -1595359 + I_DM LINE I 5265 5461 -770 1 748 28 71 0 0 chr2L 21416185 21416241 -1595303 + AT_rich Low_complexity Low_complexity 1 56 0 1 748 22 35 0 0 chr2L 21416379 21416408 -1595136 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21416509 21416560 -1594984 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 27 49 0 0 chr2L 21416915 21416956 -1594588 + AT_rich Low_complexity Low_complexity 1 41 0 1 748 213 39 0 0 chr2L 21420054 21420080 -1591464 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 748 1826 25 4 59 chr2L 21420794 21421048 -1590496 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21421048 21421083 -1590461 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21421280 21421309 -1590235 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21421410 21421461 -1590083 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21421816 21421858 -1589686 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 231 36 0 0 chr2L 21425116 21425144 -1586400 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 748 1898 12 4 59 chr2L 21425855 21426109 -1585435 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21426109 21426144 -1585400 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21426341 21426370 -1585174 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21426471 21426522 -1585022 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21426877 21426919 -1584625 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 231 36 0 0 chr2L 21430178 21430206 -1581338 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 748 2071 0 4 0 chr2L 21430917 21431156 -1580388 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21431156 21431191 -1580353 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21431388 21431417 -1580127 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21431518 21431569 -1579975 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21431924 21431966 -1579578 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 201 121 0 0 chr2L 21435217 21435250 -1576294 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 748 2084 4 0 0 chr2L 21435964 21436204 -1575340 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21436204 21436239 -1575305 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21436436 21436465 -1575079 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21436566 21436617 -1574927 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21436972 21437014 -1574530 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 213 39 0 0 chr2L 21440112 21440138 -1571406 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 748 1735 26 4 61 chr2L 21440852 21441095 -1570449 - ALUII_DM Unknown Unknown 0 240 12 1 748 3931 0 0 0 chr2L 21441095 21441523 -1570021 + ROO_LTR LTR Pao 1 428 0 1 748 61010 0 0 3 chr2L 21441523 21449802 -1561742 + ROO_I LTR Pao 1 8256 0 1 748 3766 0 0 0 chr2L 21449802 21450230 -1561314 + ROO_LTR LTR Pao 1 428 0 1 748 22 56 0 0 chr2L 21450244 21450280 -1561264 + AT_rich Low_complexity Low_complexity 1 36 0 1 748 22 35 0 0 chr2L 21450477 21450506 -1561038 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21450607 21450658 -1560886 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21451013 21451055 -1560489 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 213 39 0 0 chr2L 21454313 21454339 -1557205 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 748 1745 25 4 59 chr2L 21455053 21455307 -1556237 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21455307 21455342 -1556202 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21455539 21455568 -1555976 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21455669 21455720 -1555824 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21456074 21456116 -1555428 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 183 129 0 0 chr2L 21459367 21459398 -1552146 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 748 1853 12 0 59 chr2L 21460112 21460367 -1551177 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21460367 21460402 -1551142 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21460599 21460628 -1550916 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21460729 21460780 -1550764 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21461134 21461176 -1550368 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 183 129 0 0 chr2L 21464427 21464458 -1547086 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 748 1985 8 0 0 chr2L 21465168 21465408 -1546136 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21465408 21465443 -1546101 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21465640 21465669 -1545875 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21465770 21465821 -1545723 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 33 80 0 0 chr2L 21466142 21466217 -1545327 + AT_rich Low_complexity Low_complexity 1 75 0 1 748 183 129 0 0 chr2L 21469470 21469501 -1542043 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 748 1985 8 0 0 chr2L 21470211 21470451 -1541093 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21470451 21470486 -1541058 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21470683 21470712 -1540832 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21470813 21470864 -1540680 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 33 80 0 0 chr2L 21471185 21471260 -1540284 + AT_rich Low_complexity Low_complexity 1 75 0 1 748 183 129 0 0 chr2L 21474513 21474544 -1537000 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 748 1985 8 0 0 chr2L 21475254 21475494 -1536050 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21475494 21475529 -1536015 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21475726 21475755 -1535789 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21475856 21475907 -1535637 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 33 80 0 0 chr2L 21476228 21476303 -1535241 + AT_rich Low_complexity Low_complexity 1 75 0 1 748 183 129 0 0 chr2L 21479556 21479587 -1531957 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 748 1985 8 0 0 chr2L 21480297 21480537 -1531007 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21480537 21480572 -1530972 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21480769 21480798 -1530746 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21480899 21480950 -1530594 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 33 80 0 0 chr2L 21481271 21481346 -1530198 + AT_rich Low_complexity Low_complexity 1 75 0 1 748 201 121 0 0 chr2L 21484599 21484632 -1526912 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 748 1623 5 0 0 chr2L 21485343 21485538 -1526006 - ALUII_DM Unknown Unknown 0 240 46 1 748 426 0 0 0 chr2L 21485638 21485689 -1525855 - ALUII_DM Unknown Unknown -189 51 1 1 748 21 57 0 0 chr2L 21485689 21485724 -1525820 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21485921 21485950 -1525594 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21486051 21486102 -1525442 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chr2L 21486457 21486499 -1525045 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 222 91 0 0 chr2L 21489748 21489781 -1521763 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 748 1985 8 0 0 chr2L 21490493 21490733 -1520811 - ALUII_DM Unknown Unknown 0 240 1 1 748 21 57 0 0 chr2L 21490733 21490768 -1520776 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 22 35 0 0 chr2L 21490965 21490994 -1520550 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chr2L 21491095 21491146 -1520398 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 29 47 0 0 chr2L 21491501 21491544 -1520000 + AT_rich Low_complexity Low_complexity 1 43 0 1 748 222 91 0 0 chr2L 21494793 21494826 -1516718 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 748 1985 8 0 0 chr2L 21495538 21495778 -1515766 - ALUII_DM Unknown Unknown 0 240 1 1 93 21 57 0 0 chr2L 21495778 21495813 -1515731 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 22 35 0 0 chr2L 21496010 21496039 -1515505 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21496140 21496191 -1515353 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21496546 21496589 -1514955 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 201 121 0 0 chr2L 21499838 21499871 -1511673 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 749 2130 8 0 0 chr2L 21500585 21500825 -1510719 - ALUII_DM Unknown Unknown 0 240 1 1 749 21 57 0 0 chr2L 21500825 21500860 -1510684 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 22 35 0 0 chr2L 21501057 21501086 -1510458 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21501187 21501238 -1510306 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21501593 21501636 -1509908 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 222 91 0 0 chr2L 21504891 21504924 -1506620 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 749 2130 8 0 0 chr2L 21505636 21505876 -1505668 - ALUII_DM Unknown Unknown 0 240 1 1 749 21 57 0 0 chr2L 21505876 21505911 -1505633 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 22 35 0 0 chr2L 21506108 21506137 -1505407 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21506238 21506289 -1505255 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21506644 21506687 -1504857 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 222 91 0 0 chr2L 21509936 21509969 -1501575 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 749 2130 8 0 0 chr2L 21510681 21510921 -1500623 - ALUII_DM Unknown Unknown 0 240 1 1 749 21 57 0 0 chr2L 21510921 21510956 -1500588 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 22 35 0 0 chr2L 21511153 21511182 -1500362 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21511283 21511334 -1500210 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 28 48 0 0 chr2L 21511689 21511731 -1499813 + AT_rich Low_complexity Low_complexity 1 42 0 1 749 222 91 0 0 chr2L 21514980 21515013 -1496531 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 749 2130 8 0 0 chr2L 21515725 21515965 -1495579 - ALUII_DM Unknown Unknown 0 240 1 1 749 21 57 0 0 chr2L 21515965 21516000 -1495544 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 22 35 0 0 chr2L 21516197 21516226 -1495318 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21516327 21516378 -1495166 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21516733 21516776 -1494768 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 240 86 0 0 chr2L 21520025 21520060 -1491484 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 749 254 192 41 0 chr2L 21520770 21520843 -1490701 + (TATAA)n Simple_repeat Simple_repeat 5 80 0 1 749 22 35 0 0 chr2L 21521040 21521069 -1490475 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21521170 21521221 -1490323 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21521576 21521619 -1489925 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 240 86 0 0 chr2L 21524868 21524903 -1486641 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 749 254 192 41 0 chr2L 21525613 21525686 -1485858 + (TATAA)n Simple_repeat Simple_repeat 5 80 0 1 749 22 35 0 0 chr2L 21525883 21525912 -1485632 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21526013 21526064 -1485480 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21526419 21526462 -1485082 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 240 86 0 0 chr2L 21529711 21529746 -1481798 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 749 254 192 41 0 chr2L 21530456 21530529 -1481015 + (TATAA)n Simple_repeat Simple_repeat 5 80 0 1 749 22 35 0 0 chr2L 21530726 21530755 -1480789 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21530856 21530907 -1480637 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21531262 21531305 -1480239 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 222 91 0 0 chr2L 21534554 21534587 -1476957 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 749 2103 12 0 0 chr2L 21535299 21535539 -1476005 - ALUII_DM Unknown Unknown 0 240 1 1 749 21 57 0 0 chr2L 21535539 21535574 -1475970 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 22 35 0 0 chr2L 21535771 21535800 -1475744 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21535901 21535952 -1475592 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 28 48 0 0 chr2L 21536307 21536349 -1475195 + AT_rich Low_complexity Low_complexity 1 42 0 1 749 6227 0 0 1 chr2L 21539459 21540147 -1471397 - POGO DNA Pogo 0 2121 1435 1 749 7258 1 0 1 chr2L 21540149 21540930 -1470614 - POGO DNA Pogo -1341 780 1 1 749 201 121 0 0 chr2L 21541071 21541104 -1470440 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 749 2103 12 0 0 chr2L 21541816 21542056 -1469488 - ALUII_DM Unknown Unknown 0 240 1 1 749 21 57 0 0 chr2L 21542056 21542091 -1469453 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 22 35 0 0 chr2L 21542288 21542317 -1469227 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 37 39 0 0 chr2L 21542418 21542469 -1469075 + AT_rich Low_complexity Low_complexity 1 51 0 1 749 29 47 0 0 chr2L 21542824 21542867 -1468677 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 1953 118 82 55 chr2L 21543690 21544181 -1467363 - BATUMI_I LTR Pao -7194 769 266 1 749 2204 75 102 32 chr2L 21544153 21544524 -1467020 - BATUMI_I LTR Pao -7566 397 1 1 749 2263 24 0 43 chr2L 21544524 21544825 -1466719 - BATUMI_I LTR Pao -679 7284 6997 1 749 697 298 158 8 chr2L 21544904 21545296 -1466248 + Gypsy4_I LTR Gypsy 4045 4477 -1811 1 749 276 246 263 22 chr2L 21545621 21545758 -1465786 + GTWIN_I LTR Gypsy 4756 4925 -1496 1 749 583 324 34 21 chr2L 21545799 21546171 -1465373 + Gypsy4_I LTR Gypsy 4921 5235 -1053 1 749 1861 114 74 0 chr2L 21546180 21546479 -1465065 - MAX_LTR LTR Pao 0 321 1 1 749 12323 33 0 25 chr2L 21546482 21548017 -1463527 - MAX_I LTR Pao 0 7914 6418 1 749 20861 60 37 71 chr2L 21548015 21551134 -1460410 - MAX_I LTR Pao -4354 3560 547 1 749 12581 91 3 1 chr2L 21551186 21552919 -1458625 - S_DM DNA Tc1 0 1736 1 1 749 552 174 85 64 chr2L 21553064 21553344 -1458200 - MAX_I LTR Pao -7349 565 280 1 749 3349 34 18 0 chr2L 21553344 21553730 -1457814 - Invader6_LTR LTR Gypsy 0 393 1 1 749 3190 9 0 0 chr2L 21553738 21554084 -1457460 + Invader4_LTR LTR Gypsy 1 346 0 1 749 8756 33 25 5 chr2L 21554084 21555410 -1456134 + Invader4_I LTR Gypsy 1 1353 -1060 1 749 390 0 0 0 chr2L 21555401 21555443 -1456101 + Invader4_LTR LTR Gypsy 305 346 0 1 749 2278 42 3 62 chr2L 21555443 21555750 -1455794 - MAX_I LTR Pao -7625 289 1 1 749 1938 107 70 0 chr2L 21555750 21556050 -1455494 - MAX_LTR LTR Pao 0 321 1 1 749 457 353 94 36 chr2L 21556137 21556798 -1454746 + Gypsy4_I LTR Gypsy 5521 6096 -192 1 749 22 0 0 0 chr2L 21557296 21557318 -1454226 + AT_rich Low_complexity Low_complexity 1 22 0 1 749 3638 102 54 2 chr2L 21557318 21557878 -1453666 + DNAREP1_DM LINE Penelope 2 590 -4 1 749 836 308 75 10 chr2L 21557890 21558290 -1453254 - G_DM LINE Jockey -1987 2359 1934 1 749 280 115 43 26 chr2L 21560102 21560218 -1451326 + (TATAA)n Simple_repeat Simple_repeat 5 122 0 1 749 730 134 146 63 chr2L 21560246 21560485 -1451059 - Gypsy12A_LTR LTR Gypsy -470 1810 1552 1 749 267 279 27 55 chr2L 21560482 21560589 -1450955 - Gypsy12A_LTR LTR Gypsy -866 1414 1311 1 749 1731 10 0 0 chr2L 21560589 21560787 -1450757 - Copia2_LTR_DM LTR Copia 0 198 1 1 749 3917 2 0 0 chr2L 21560792 21561220 -1450324 - ROO_LTR LTR Pao 0 428 1 1 749 728 0 12 0 chr2L 21561220 21561305 -1450239 - ROO_I LTR Pao 0 8256 8171 1 749 12230 91 4 1 chr2L 21561305 21563036 -1448508 + S_DM DNA Tc1 1 1736 0 1 749 10188 1 0 0 chr2L 21563036 21564179 -1447365 - ROO_I LTR Pao -84 8172 7030 1 749 49143 1 27 0 chr2L 21564167 21569795 -1441749 - ROO_I LTR Pao -2475 5781 1 1 749 3917 2 0 0 chr2L 21569795 21570223 -1441321 - ROO_LTR LTR Pao 0 428 1 1 749 474 93 0 13 chr2L 21570325 21570401 -1441143 - Gypsy12A_LTR LTR Gypsy -1096 1184 1110 1 749 1035 205 38 38 chr2L 21570410 21570724 -1440820 - Gypsy12A_LTR LTR Gypsy -1437 843 530 1 749 1374 7 0 0 chr2L 21570724 21570875 -1440669 + PROTOP DNA P 1 151 -4329 1 749 997 185 23 37 chr2L 21570900 21571277 -1440267 - Gypsy12A_LTR LTR Gypsy -1743 537 227 1 749 548 160 40 0 chr2L 21571281 21571381 -1440163 - Gypsy12A_LTR LTR Gypsy -2176 104 1 1 749 5222 20 45 73 chr2L 21571787 21572526 -1439018 + PROTOP_A DNA P 1 718 -387 1 749 3932 34 65 0 chr2L 21572532 21573028 -1438516 - PROTOP_A DNA P -577 528 1 1 749 271 100 25 0 chr2L 21574194 21574234 -1437310 + DNAREP1_DM LINE Penelope 2 42 -552 1 749 23 54 0 0 chr2L 21574310 21574347 -1437197 + AT_rich Low_complexity Low_complexity 1 37 0 1 749 24 0 0 0 chr2L 21574402 21574426 -1437118 + AT_rich Low_complexity Low_complexity 1 24 0 1 749 211 192 39 0 chr2L 21575270 21575322 -1436222 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 749 356 120 0 0 chr2L 21575398 21575448 -1436096 - DNAREP1_DM LINE Penelope -225 369 320 1 749 698 54 11 0 chr2L 21575456 21575549 -1435995 - DNAREP1_DM LINE Penelope -461 133 40 1 749 464 116 0 0 chr2L 21575750 21575819 -1435725 + FB4_DM DNA Tc1 1 69 -4020 1 749 26 30 0 0 chr2L 21576875 21576908 -1434636 + AT_rich Low_complexity Low_complexity 1 33 0 1 749 36 40 0 0 chr2L 21577152 21577202 -1434342 + AT_rich Low_complexity Low_complexity 1 50 0 1 749 305 105 0 66 chr2L 21577648 21577709 -1433835 - DNAREP1_DM LINE Penelope -16 578 522 1 749 270 280 39 20 chr2L 21577811 21577913 -1433631 - Gypsy3_LTR LTR Gypsy -20 378 275 1 749 407 209 142 14 chr2L 21577948 21578089 -1433455 - Gypsy3_LTR LTR Gypsy -239 159 1 1 749 414 211 81 40 chr2L 21578089 21578188 -1433356 - DNAREP1_DM LINE Penelope -106 488 386 1 749 249 218 0 0 chr2L 21579904 21579959 -1431585 - DNAREP1_DM LINE Penelope -5 589 535 1 749 302 212 23 34 chr2L 21579965 21580053 -1431491 - DNAREP1_DM LINE Penelope -230 364 278 1 749 23 33 0 0 chr2L 21580136 21580166 -1431378 + AT_rich Low_complexity Low_complexity 1 30 0 1 749 1250 78 156 5 chr2L 21580274 21580479 -1431065 - DNAREP1_DM LINE Penelope -3 591 356 1 749 514 86 0 0 chr2L 21580487 21580557 -1430987 + DNAREP1_DM LINE Penelope 525 594 0 1 749 591 206 185 31 chr2L 21580913 21581108 -1430436 + DNAREP1_DM LINE Penelope 370 594 0 1 749 354 189 9 16 chr2L 21581374 21581486 -1430058 + DNAREP1_DM LINE Penelope 275 423 -171 1 749 324 210 0 0 chr2L 21581533 21581595 -1429949 - DNAREP1_DM LINE Penelope -532 62 1 1 749 465 108 0 170 chr2L 21581903 21582003 -1429541 - DNAREP1_DM LINE Penelope 0 594 512 1 749 9240 14 1 35 chr2L 21582300 21583444 -1428100 + PROTOP_A DNA P 1 1105 0 1 749 1993 92 126 40 chr2L 21583444 21583793 -1427751 - DNAREP1_DM LINE Penelope -20 574 196 1 749 560 172 109 22 chr2L 21583783 21583920 -1427624 + DNAREP1_DM LINE Penelope 231 379 -215 1 749 296 292 47 0 chr2L 21583924 21583937 -1427607 - P_DG DNA P -24 2864 2755 1 749 611 98 33 0 chr2L 21583937 21584029 -1427515 + DNAREP1_DM LINE Penelope 500 594 0 1 749 999 97 18 129 chr2L 21586032 21586257 -1425287 + DNAREP1_DM LINE Penelope 142 341 -253 1 749 522 17 0 0 chr2L 21586261 21586321 -1425223 + DNAREP1_DM LINE Penelope 535 594 0 1 749 421 55 0 14 chr2L 21587658 21587732 -1423812 - BARI1 DNA Tc1 -306 1444 1372 1 749 6110 105 55 16 chr2L 21587739 21588826 -1422718 - BARI1 DNA Tc1 -546 1182 40 1 749 681 25 0 0 chr2L 21589668 21589747 -1421797 + DNAREP1_DM LINE Penelope 514 592 -2 1 749 1016 132 188 5 chr2L 21591031 21591244 -1420300 + DNAREP1_DM LINE Penelope 343 594 0 1 749 29 28 0 0 chr2L 21591295 21591331 -1420213 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 3096 34 83 0 chr2L 21591340 21591724 -1419820 - BS3_DM LINE Jockey -43 1747 1332 1 749 6491 53 44 6 chr2L 21591757 21592591 -1418953 - BS3_DM LINE Jockey -603 1187 322 1 749 823 264 45 88 chr2L 21593076 21593542 -1418002 - CIRCE LINE Composite -1979 4377 3932 1 749 6502 118 11 0 chr2L 21593543 21594502 -1417042 + DMRT1B LINE R1 2012 2981 -2202 1 749 4851 110 119 1 chr2L 21594502 21595316 -1416228 + DMRT1B LINE R1 4274 5183 0 1 749 419 224 0 48 chr2L 21595320 21595423 -1416121 - CIRCE LINE Composite -2415 3941 3844 1 749 329 174 172 10 chr2L 21595507 21595606 -1415938 - Gypsy12A_LTR LTR Gypsy -2165 115 1 1 749 29 28 0 0 chr2L 21596044 21596080 -1415464 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 24 77 0 0 chr2L 21596290 21596342 -1415202 + AT_rich Low_complexity Low_complexity 1 52 0 1 749 28 29 0 0 chr2L 21596433 21596468 -1415076 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 25 51 0 0 chr2L 21596874 21596913 -1414631 + AT_rich Low_complexity Low_complexity 1 39 0 1 749 3893 5 0 0 chr2L 21597084 21597512 -1414032 + ROO_LTR LTR Pao 1 428 0 1 749 49146 1 27 0 chr2L 21597512 21603139 -1408405 + ROO_I LTR Pao 1 5781 -2475 1 749 10709 2 10 0 chr2L 21603127 21604342 -1407202 + ROO_I LTR Pao 7030 8256 0 1 749 3907 2 0 0 chr2L 21604342 21604770 -1406774 + ROO_LTR LTR Pao 1 428 0 1 749 290 98 0 56 chr2L 21604955 21605009 -1406535 + PROTOP_A DNA P 502 552 -553 1 749 24 53 0 0 chr2L 21605364 21605402 -1406142 + AT_rich Low_complexity Low_complexity 1 38 0 1 749 40 21 0 0 chr2L 21605946 21605993 -1405551 + AT_rich Low_complexity Low_complexity 1 47 0 1 749 242 275 0 0 chr2L 21606500 21606569 -1404975 + Gypsy4_I LTR Gypsy 895 963 -5325 1 749 246 330 20 20 chr2L 21606539 21606638 -1404906 + Gypsy6_I LTR Gypsy 1478 1576 -5436 1 749 21 36 0 0 chr2L 21606843 21606871 -1404673 + AT_rich Low_complexity Low_complexity 1 28 0 1 749 23 0 0 0 chr2L 21607031 21607054 -1404490 + AT_rich Low_complexity Low_complexity 1 23 0 1 749 285 125 0 40 chr2L 21608310 21608360 -1403184 + DNAREP1_DM LINE Penelope 547 594 0 1 749 6682 58 101 36 chr2L 21608413 21609944 -1401600 + IVK_DM LINE I 598 2229 -3173 1 749 6130 66 31 1 chr2L 21609942 21610921 -1400623 + IVK_DM LINE I 2432 3491 -1911 1 749 1683 57 0 0 chr2L 21610911 21611122 -1400422 + IVK_DM LINE I 3911 4121 -1281 1 749 1957 60 53 0 chr2L 21611119 21611385 -1400159 + IVK_DM LINE I 5113 5392 -10 1 749 353 353 4 22 chr2L 21611441 21611667 -1399877 - NINJA_I LTR Pao -3142 2869 2648 1 749 501 291 80 42 chr2L 21611807 21612094 -1399450 - NINJA_I LTR Pao -3558 2453 2156 1 749 22 35 0 0 chr2L 21613140 21613169 -1398375 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 2023 127 86 114 chr2L 21613336 21613413 -1398131 - DNAREP1_DM LINE Penelope 0 594 513 1 749 254 95 0 23 chr2L 21613413 21613456 -1398088 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 749 2023 135 106 76 chr2L 21613456 21614145 -1397399 - DNAREP1_DM LINE Penelope -82 512 8 1 749 24 32 0 0 chr2L 21614773 21614804 -1396740 + AT_rich Low_complexity Low_complexity 1 31 0 1 749 28 48 0 0 chr2L 21615731 21615773 -1395771 + AT_rich Low_complexity Low_complexity 1 42 0 1 749 1210 105 99 30 chr2L 21615773 21616024 -1395520 + DNAREP1_DM LINE Penelope 1 395 -199 1 749 22 70 0 0 chr2L 21616589 21616632 -1394912 + AT_rich Low_complexity Low_complexity 1 43 0 1 749 1106 167 128 19 chr2L 21616775 21617032 -1394512 - DNAREP1_DM LINE Penelope -6 588 304 1 749 326 119 48 0 chr2L 21618390 21618474 -1393070 + (TA)n Simple_repeat Simple_repeat 2 89 0 1 749 21 0 0 0 chr2L 21618672 21618693 -1392851 + AT_rich Low_complexity Low_complexity 1 21 0 1 749 537 89 0 12 chr2L 21619169 21619249 -1392295 - DNAREP1_DM LINE Penelope 0 594 516 1 749 1284 120 6 20 chr2L 21619247 21619479 -1392065 - DNAREP1_DM LINE Penelope -237 357 2 1 749 254 128 0 0 chr2L 21619640 21619687 -1391857 + FB4_DM DNA Tc1 1 47 -4042 1 749 732 215 8 116 chr2L 21620456 21620695 -1390849 + DNAREP1_DM LINE Penelope 266 478 -116 1 749 1550 117 77 43 chr2L 21620695 21621088 -1390456 + DNAREP1_DM LINE Penelope 1 293 -301 1 749 1803 104 33 7 chr2L 21621146 21621417 -1390127 + DNAREP1_DM LINE Penelope 296 573 -21 1 749 1923 97 54 16 chr2L 21622232 21622767 -1388777 + DNAREP1_DM LINE Penelope 1 594 0 1 749 215 212 15 29 chr2L 21623141 21623209 -1388335 + (CATA)n Simple_repeat Simple_repeat 3 69 0 1 749 23 0 0 0 chr2L 21623992 21624015 -1387529 + AT_rich Low_complexity Low_complexity 1 23 0 1 749 24 77 0 0 chr2L 21624228 21624280 -1387264 + AT_rich Low_complexity Low_complexity 1 52 0 1 749 21 57 0 0 chr2L 21624658 21624693 -1386851 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 698 45 34 0 chr2L 21625100 21625189 -1386355 + DNAREP1_DM LINE Penelope 343 434 -160 1 749 243 239 70 0 chr2L 21625298 21625369 -1386175 - DNAREP1_DM LINE Penelope -279 315 240 1 750 48 60 0 0 chr2L 21628327 21628410 -1383134 + AT_rich Low_complexity Low_complexity 1 83 0 1 750 23 33 0 0 chr2L 21630087 21630117 -1381427 + AT_rich Low_complexity Low_complexity 1 30 0 1 750 922 237 88 49 chr2L 21630824 21631152 -1380392 - IDEFIX_LTR LTR Gypsy -101 493 153 1 750 515 242 107 19 chr2L 21631981 21632242 -1379302 - Transib-N1_DM DNA Transib -230 284 1 1 750 385 206 0 0 chr2L 21634286 21634354 -1377190 - DNAREP1_DM LINE Penelope -150 444 377 1 750 387 227 197 0 chr2L 21635943 21636075 -1375469 + DNAREP1_DM LINE Penelope 426 583 -11 1 750 23 54 0 0 chr2L 21636503 21636540 -1375004 + AT_rich Low_complexity Low_complexity 1 37 0 1 750 380 78 0 0 chr2L 21636551 21636602 -1374942 + DNAREP1_DM LINE Penelope 1 51 -543 1 750 21 0 0 0 chr2L 21636605 21636626 -1374918 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 28 0 0 0 chr2L 21636668 21636696 -1374848 + AT_rich Low_complexity Low_complexity 1 28 0 1 750 1454 124 108 92 chr2L 21636709 21637152 -1374392 + DNAREP1_DM LINE Penelope 118 594 0 1 750 21 36 0 0 chr2L 21637243 21637271 -1374273 + AT_rich Low_complexity Low_complexity 1 28 0 1 750 24 0 0 0 chr2L 21640428 21640452 -1371092 + AT_rich Low_complexity Low_complexity 1 24 0 1 750 28 0 0 0 chr2L 21640587 21640615 -1370929 + AT_rich Low_complexity Low_complexity 1 28 0 1 750 4608 122 113 10 chr2L 21641741 21642760 -1368784 - DMCR1A LINE CR1 0 4470 3347 1 750 1699 153 108 6 chr2L 21644363 21644679 -1366865 - DNAREP1_DM LINE Penelope -2 592 245 1 750 1624 117 77 10 chr2L 21644677 21644987 -1366557 - DNAREP1_DM LINE Penelope -262 332 2 1 750 306 114 310 14 chr2L 21644982 21645053 -1366491 - FB4_DM DNA Tc1 -32 4057 3966 1 750 532 189 6 56 chr2L 21645085 21645247 -1366297 - Gypsy8_I LTR Gypsy -4128 219 66 1 750 24 32 0 0 chr2L 21646108 21646139 -1365405 + AT_rich Low_complexity Low_complexity 1 31 0 1 750 246 167 0 0 chr2L 21646496 21646538 -1365006 - DNAREP1_DM LINE Penelope -552 42 1 1 750 26 64 0 0 chr2L 21647868 21647915 -1363629 + AT_rich Low_complexity Low_complexity 1 47 0 1 750 189 26 79 0 chr2L 21648061 21648099 -1363445 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 750 269 167 13 40 chr2L 21648104 21648179 -1363365 - DMCR1A LINE CR1 -256 4214 4142 1 750 571 219 300 0 chr2L 21648294 21648648 -1362896 - DMCR1A LINE CR1 -639 3831 3374 1 750 350 230 46 0 chr2L 21648687 21648774 -1362770 - DMCR1A LINE CR1 -1611 2859 2769 1 750 774 132 0 0 chr2L 21648813 21648927 -1362617 - DOC LINE Jockey -1003 3722 3609 1 750 3447 102 126 65 chr2L 21648929 21649633 -1361911 - Gypsy12A_LTR LTR Gypsy -2 2278 1532 1 750 2068 164 179 46 chr2L 21649631 21650598 -1360946 - Gypsy12A_LTR LTR Gypsy -1184 1096 1 1 750 2388 21 48 0 chr2L 21650607 21650896 -1360648 + G5A_DM LINE Jockey 2387 2689 -152 1 750 2242 106 66 14 chr2L 21650897 21651260 -1360284 - DOC LINE Jockey -3588 1137 756 1 750 1785 90 121 20 chr2L 21651259 21651565 -1359979 - DOC LINE Jockey -4365 360 24 1 750 2946 241 44 23 chr2L 21651589 21652367 -1359177 - BS2 LINE Jockey -198 4523 3730 1 750 520 146 0 0 chr2L 21652650 21652732 -1358812 + DNAREP1_DM LINE Penelope 292 373 -221 1 750 3167 3 0 0 chr2L 21653246 21653592 -1357952 + Invader4_LTR LTR Gypsy 1 346 0 1 750 11675 66 37 42 chr2L 21653592 21656147 -1355397 + Invader4_I LTR Gypsy 1 2413 0 1 750 3154 6 0 0 chr2L 21656147 21656493 -1355051 + Invader4_LTR LTR Gypsy 1 346 0 1 750 1746 144 149 5 chr2L 21656660 21657030 -1354514 - Invader1_LTR LTR Gypsy 0 423 1 1 750 26 0 0 0 chr2L 21657304 21657330 -1354214 + AT_rich Low_complexity Low_complexity 1 26 0 1 750 22 0 0 0 chr2L 21657777 21657799 -1353745 + AT_rich Low_complexity Low_complexity 1 22 0 1 750 24 32 0 0 chr2L 21661802 21661833 -1349711 + AT_rich Low_complexity Low_complexity 1 31 0 1 750 28 95 0 0 chr2L 21663842 21663926 -1347618 + AT_rich Low_complexity Low_complexity 1 84 0 1 750 627 16 93 0 chr2L 21664763 21664892 -1346652 + (TA)n Simple_repeat Simple_repeat 2 142 0 1 750 21 0 0 0 chr2L 21665146 21665167 -1346377 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 22 70 0 0 chr2L 21665737 21665780 -1345764 + AT_rich Low_complexity Low_complexity 1 43 0 1 750 1236 158 182 34 chr2L 21666785 21667158 -1344386 + DNAREP1_DM LINE Penelope 167 594 0 1 750 27 29 0 0 chr2L 21667283 21667317 -1344227 + AT_rich Low_complexity Low_complexity 1 34 0 1 750 278 211 0 0 chr2L 21669984 21670041 -1341503 + DNAREP1_DM LINE Penelope 4 60 -534 1 750 21 36 0 0 chr2L 21671438 21671466 -1340078 + AT_rich Low_complexity Low_complexity 1 28 0 1 750 238 159 0 0 chr2L 21671685 21671729 -1339815 + DNAREP1_DM LINE Penelope 1 44 -550 1 750 23 0 0 0 chr2L 21671741 21671764 -1339780 + AT_rich Low_complexity Low_complexity 1 23 0 1 750 1127 148 128 30 chr2L 21671784 21672049 -1339495 + DNAREP1_DM LINE Penelope 283 573 -21 1 750 25 0 0 0 chr2L 21672052 21672077 -1339467 + AT_rich Low_complexity Low_complexity 1 25 0 1 750 11883 60 15 4 chr2L 21673475 21675114 -1336430 - FB4_DM DNA Tc1 -1329 2760 1105 1 750 21 0 0 0 chr2L 21675138 21675159 -1336385 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 5418 122 62 4 chr2L 21675254 21676213 -1335331 - FB4_DM DNA Tc1 -1412 2677 1664 1 750 1428 97 46 0 chr2L 21676220 21676457 -1335087 - FB4_DM DNA Tc1 -2715 1374 1127 1 750 30 0 0 0 chr2L 21680273 21680303 -1331241 + AT_rich Low_complexity Low_complexity 1 30 0 1 750 24 67 0 0 chr2L 21682385 21682430 -1329114 + AT_rich Low_complexity Low_complexity 1 45 0 1 750 317 210 0 0 chr2L 21682591 21682653 -1328891 + DNAREP1_DM LINE Penelope 4 65 -529 1 750 995 106 160 43 chr2L 21682910 21683098 -1328446 - DNAREP1_DM LINE Penelope 0 594 385 1 750 584 154 99 129 chr2L 21683096 21683297 -1328247 - DNAREP1_DM LINE Penelope -395 199 5 1 750 24 32 0 0 chr2L 21684468 21684499 -1327045 + AT_rich Low_complexity Low_complexity 1 31 0 1 750 2316 125 76 0 chr2L 21685966 21686374 -1325170 + DNAREP1_DM LINE Penelope 1 439 -155 1 750 1798 119 178 61 chr2L 21686533 21687017 -1324527 + Mariner2_DM DNA Tc1 1 541 -371 1 750 471 97 0 0 chr2L 21687016 21687088 -1324456 + Mariner2_DM DNA Tc1 841 912 0 1 750 578 204 120 6 chr2L 21688043 21688201 -1323343 - DNAREP1_DM LINE Penelope 0 594 419 1 750 26 88 0 0 chr2L 21688827 21688895 -1322649 + AT_rich Low_complexity Low_complexity 1 68 0 1 750 21 0 0 0 chr2L 21689002 21689023 -1322521 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 3157 84 84 38 chr2L 21689290 21689848 -1321696 - DNAREP1_DM LINE Penelope -3 591 8 1 750 1299 112 136 51 chr2L 21690719 21690992 -1320552 + DNAREP1_DM LINE Penelope 195 490 -104 1 750 306 117 167 0 chr2L 21691137 21691197 -1320347 + DNAREP1_DM LINE Penelope 1 70 -524 1 750 188 86 29 0 chr2L 21691715 21691750 -1319794 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 750 2310 7 0 4 chr2L 21691881 21692157 -1319387 - BURDOCK_LTR LTR Gypsy 0 275 1 1 750 50846 2 0 0 chr2L 21692158 21698018 -1313526 - BURDOCK_I LTR Gypsy 0 5860 1 1 750 2310 7 0 4 chr2L 21698018 21698294 -1313250 - BURDOCK_LTR LTR Gypsy 0 275 1 1 750 308 194 0 0 chr2L 21698651 21698713 -1312831 - DNAREP1_DM LINE Penelope -8 586 525 1 750 990 194 99 2 chr2L 21698734 21699145 -1312399 - DNAREP1_DM LINE Penelope -254 340 16 1 750 847 171 25 20 chr2L 21699145 21699342 -1312202 - DNAREP1_DM LINE Penelope -348 246 49 1 750 385 197 15 59 chr2L 21699346 21699481 -1312063 - DNAREP1_DM LINE Penelope -437 157 29 1 750 33 56 0 0 chr2L 21701503 21701557 -1309987 + AT_rich Low_complexity Low_complexity 1 54 0 1 750 496 137 0 31 chr2L 21702189 21702287 -1309257 + Transib-N1_DM DNA Transib 21 115 -399 1 750 960 127 328 33 chr2L 21703828 21704139 -1307405 - DNAREP1_DM LINE Penelope -1 593 192 1 750 21 36 0 0 chr2L 21704664 21704692 -1306852 + AT_rich Low_complexity Low_complexity 1 28 0 1 750 339 109 0 0 chr2L 21705309 21705364 -1306180 + FB4_DM DNA Tc1 1110 1164 -2925 1 750 8916 143 192 25 chr2L 21705364 21707775 -1303769 + FB4_DM DNA Tc1 1276 4089 0 1 750 377 91 90 13 chr2L 21707889 21707967 -1303577 - DNAREP1_DM LINE Penelope -21 573 490 1 750 1446 145 224 50 chr2L 21708379 21708816 -1302728 - DNAREP1_DM LINE Penelope -81 513 1 1 750 613 138 7 78 chr2L 21708835 21708976 -1302568 - DNAREP1_DM LINE Penelope -462 132 2 1 750 26 30 0 0 chr2L 21709342 21709375 -1302169 + AT_rich Low_complexity Low_complexity 1 33 0 1 750 325 197 0 0 chr2L 21709698 21709769 -1301775 + DNAREP1_DM LINE Penelope 48 118 -476 1 750 1303 141 300 18 chr2L 21709771 21710207 -1301337 + DNAREP1_DM LINE Penelope 36 594 0 1 750 23 33 0 0 chr2L 21710332 21710362 -1301182 + AT_rich Low_complexity Low_complexity 1 30 0 1 750 21 0 0 0 chr2L 21710454 21710475 -1301069 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 691 104 199 7 chr2L 21710831 21710967 -1300577 - DNAREP1_DM LINE Penelope 0 594 433 1 750 1367 47 88 0 chr2L 21711631 21711824 -1299720 - DNAREP1_DM LINE Penelope 0 594 385 1 750 23 54 0 0 chr2L 21714108 21714145 -1297399 + AT_rich Low_complexity Low_complexity 1 37 0 1 750 359 256 0 0 chr2L 21714751 21714837 -1296707 + DNAREP1_DM LINE Penelope 6 91 -503 1 750 449 211 98 98 chr2L 21715000 21715194 -1296350 - DNAREP1_DM LINE Penelope -66 528 335 1 750 634 82 10 0 chr2L 21715191 21715289 -1296255 + Gypsy12A_LTR LTR Gypsy 2182 2280 0 1 750 364 157 12 35 chr2L 21715289 21715375 -1296169 - DM297_I LTR Gypsy -5702 465 382 1 750 24 77 0 0 chr2L 21715457 21715509 -1296035 + AT_rich Low_complexity Low_complexity 1 52 0 1 750 473 152 143 99 chr2L 21715555 21715716 -1295828 - DM176_LTR LTR Gypsy -202 305 138 1 750 1038 61 95 0 chr2L 21715788 21715936 -1295608 - DNAREP1_DM LINE Penelope 0 594 433 1 750 705 130 96 8 chr2L 21715936 21716121 -1295423 - DNAREP1_DM LINE Penelope -267 327 86 1 750 21 57 0 0 chr2L 21716284 21716319 -1295225 + AT_rich Low_complexity Low_complexity 1 35 0 1 750 445 186 346 0 chr2L 21717723 21717893 -1293651 - DNAREP1_DM LINE Penelope 0 594 366 1 750 291 193 53 0 chr2L 21717912 21717969 -1293575 - DNAREP1_DM LINE Penelope -513 81 22 1 750 1058 150 131 16 chr2L 21718059 21718382 -1293162 + DNAREP1_DM LINE Penelope 53 316 -278 1 750 234 173 96 0 chr2L 21718410 21718462 -1293082 + DNAREP1_DM LINE Penelope 537 593 -1 1 750 30 0 0 0 chr2L 21719238 21719268 -1292276 + AT_rich Low_complexity Low_complexity 1 30 0 1 750 23 54 0 0 chr2L 21721423 21721460 -1290084 + AT_rich Low_complexity Low_complexity 1 37 0 1 750 28 48 0 0 chr2L 21721950 21721992 -1289552 + AT_rich Low_complexity Low_complexity 1 42 0 1 750 23 54 0 0 chr2L 21723348 21723385 -1288159 + AT_rich Low_complexity Low_complexity 1 37 0 1 750 31 44 0 0 chr2L 21724049 21724094 -1287450 + AT_rich Low_complexity Low_complexity 1 45 0 1 750 1160 94 0 37 chr2L 21725504 21725692 -1285852 - PROTOP_B DNA P -5 1148 968 1 750 1594 74 107 9 chr2L 21725691 21725924 -1285620 - PROTOP_B DNA P -899 254 1 1 750 2485 115 194 22 chr2L 21726073 21726579 -1284965 + DNAREP1_DM LINE Penelope 2 594 0 1 750 27 0 0 0 chr2L 21726663 21726690 -1284854 + AT_rich Low_complexity Low_complexity 1 27 0 1 750 855 148 42 0 chr2L 21727627 21727769 -1283775 - DNAREP1_DM LINE Penelope -16 578 431 1 750 917 131 346 0 chr2L 21729134 21729362 -1282182 + DNAREP1_DM LINE Penelope 1 307 -287 1 750 372 151 353 6 chr2L 21729400 21729567 -1281977 - DNAREP1_DM LINE Penelope -299 295 71 1 750 2147 98 104 3 chr2L 21729562 21729908 -1281636 + DNAREP1_DM LINE Penelope 184 564 -30 1 750 966 227 95 54 chr2L 21729908 21730299 -1281245 + DM297_LTR LTR Gypsy 1 407 -7 1 750 451 182 58 121 chr2L 21730298 21730764 -1280780 + DM297_I LTR Gypsy 20 465 -5702 1 750 3892 97 28 76 chr2L 21730764 21731477 -1280067 - Gypsy12A_LTR LTR Gypsy 0 2280 1602 1 750 211 113 38 0 chr2L 21732181 21732234 -1279310 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 750 4172 128 229 47 chr2L 21732317 21733387 -1278157 - Gypsy12A_LTR LTR Gypsy -996 1284 20 1 750 2886 141 78 11 chr2L 21733398 21734105 -1277439 + DM297_I LTR Gypsy 462 1258 -4909 1 750 261 180 0 16 chr2L 21735090 21735152 -1276392 - Transib-N1_DM DNA Transib -433 81 21 1 750 6058 130 68 35 chr2L 21735183 21736394 -1275150 + DM297_I LTR Gypsy 2708 3958 -2209 1 750 5482 116 78 22 chr2L 21736400 21737599 -1273945 + DM297_I LTR Gypsy 4907 6247 -173 1 750 449 242 110 87 chr2L 21738036 21738400 -1273144 + GTWIN_LTR LTR Gypsy 14 405 -90 1 750 299 206 15 0 chr2L 21738523 21738591 -1272953 + DNAREP1_DM LINE Penelope 503 571 -23 1 750 327 148 81 16 chr2L 21739182 21739244 -1272300 - DNAREP1_DM LINE Penelope -121 473 408 1 750 740 223 67 4 chr2L 21739522 21739747 -1271797 + DNAREP1_DM LINE Penelope 2 240 -354 1 750 592 90 209 101 chr2L 21739780 21739928 -1271616 + DNAREP1_DM LINE Penelope 431 594 0 1 750 47 61 0 0 chr2L 21740027 21740109 -1271435 + AT_rich Low_complexity Low_complexity 1 82 0 1 750 29 0 0 0 chr2L 21740784 21740813 -1270731 + AT_rich Low_complexity Low_complexity 1 29 0 1 750 26 50 0 0 chr2L 21740962 21741002 -1270542 + AT_rich Low_complexity Low_complexity 1 40 0 1 750 21 0 0 0 chr2L 21741265 21741286 -1270258 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 256 131 27 164 chr2L 21743136 21743209 -1268335 - DNAREP1_DM LINE Penelope -15 579 517 1 750 1456 114 73 0 chr2L 21743198 21743492 -1268052 + DNAREP1_DM LINE Penelope 203 556 -38 1 750 21 57 0 0 chr2L 21743777 21743812 -1267732 + AT_rich Low_complexity Low_complexity 1 35 0 1 750 30 45 0 0 chr2L 21743974 21744018 -1267526 + AT_rich Low_complexity Low_complexity 1 44 0 1 750 558 112 560 22 chr2L 21744132 21744314 -1267230 + DNAREP1_DM LINE Penelope 5 284 -310 1 750 594 105 162 0 chr2L 21744312 21744417 -1267127 + DNAREP1_DM LINE Penelope 473 594 0 1 750 344 221 59 42 chr2L 21744314 21744432 -1267112 - P_DG DNA P -26 2862 2743 1 750 24 0 0 0 chr2L 21745462 21745486 -1266058 + AT_rich Low_complexity Low_complexity 1 24 0 1 750 29 0 0 0 chr2L 21745530 21745559 -1265985 + AT_rich Low_complexity Low_complexity 1 29 0 1 750 1080 132 238 80 chr2L 21745653 21746039 -1265505 - PROTOP DNA P -4033 447 1 1 750 180 0 0 0 chr2L 21750366 21750386 -1261158 + (CAGT)n Simple_repeat Simple_repeat 2 21 0 1 750 25 31 0 0 chr2L 21750492 21750524 -1261020 + AT_rich Low_complexity Low_complexity 1 32 0 1 750 2084 109 76 36 chr2L 21751186 21751621 -1259923 - DNAREP1_DM LINE Penelope -32 562 70 1 750 23 0 0 0 chr2L 21752446 21752469 -1259075 + AT_rich Low_complexity Low_complexity 1 23 0 1 750 626 225 0 28 chr2L 21752625 21752767 -1258777 - DNAREP1_DM LINE Penelope -96 498 361 1 750 275 234 52 70 chr2L 21752779 21752894 -1258650 - DNAREP1_DM LINE Penelope -287 307 195 1 750 240 86 0 0 chr2L 21753097 21753132 -1258412 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 750 21 0 0 0 chr2L 21753447 21753468 -1258076 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 245 170 0 0 chr2L 21753948 21753995 -1257549 - DNAREP1_DM LINE Penelope -172 422 376 1 750 186 43 0 0 chr2L 21754152 21754175 -1257369 + (TATG)n Simple_repeat Simple_repeat 4 26 0 1 750 21 71 0 0 chr2L 21754449 21754491 -1257053 + AT_rich Low_complexity Low_complexity 1 42 0 1 750 25 0 0 0 chr2L 21755207 21755232 -1256312 + AT_rich Low_complexity Low_complexity 1 25 0 1 750 24 0 0 0 chr2L 21756291 21756315 -1255229 + AT_rich Low_complexity Low_complexity 1 24 0 1 751 27 0 0 0 chr2L 21759393 21759420 -1252124 + AT_rich Low_complexity Low_complexity 1 27 0 1 751 487 225 176 0 chr2L 21759866 21760008 -1251536 - DNAREP1_DM LINE Penelope -10 584 418 1 751 23 0 0 0 chr2L 21760183 21760206 -1251338 + AT_rich Low_complexity Low_complexity 1 23 0 1 751 251 132 0 0 chr2L 21760251 21760289 -1251255 - DNAREP1_DM LINE Penelope -556 38 1 1 751 32 75 0 0 chr2L 21760902 21760969 -1250575 + AT_rich Low_complexity Low_complexity 1 67 0 1 751 235 220 0 63 chr2L 21761131 21761194 -1250350 - DNAREP1_DM LINE Penelope -115 479 421 1 751 275 204 0 0 chr2L 21761227 21761276 -1250268 - DNAREP1_DM LINE Penelope -107 487 439 1 751 241 158 0 0 chr2L 21761302 21761340 -1250204 + DNAREP1_DM LINE Penelope 403 440 -154 1 751 514 200 38 8 chr2L 21761379 21761510 -1250034 - DNAREP1_DM LINE Penelope 0 594 460 1 751 266 260 20 20 chr2L 21761704 21761806 -1249738 - DNAREP1_DM LINE Penelope -492 102 1 1 751 333 109 18 0 chr2L 21761804 21761859 -1249685 - DNAREP1_DM LINE Penelope 0 594 539 1 751 834 39 20 0 chr2L 21761927 21762029 -1249515 - DNAREP1_DM LINE Penelope -490 104 1 1 751 32 26 0 0 chr2L 21762095 21762134 -1249410 + AT_rich Low_complexity Low_complexity 1 39 0 1 751 27 0 0 0 chr2L 21762344 21762371 -1249173 + AT_rich Low_complexity Low_complexity 1 27 0 1 751 21 36 0 0 chr2L 21762524 21762552 -1248992 + AT_rich Low_complexity Low_complexity 1 28 0 1 751 192 77 0 0 chr2L 21764857 21764883 -1246661 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 751 241 146 0 0 chr2L 21764919 21764960 -1246584 + DNAREP1_DM LINE Penelope 535 575 -19 1 751 2278 91 138 181 chr2L 21769322 21769939 -1241605 + DNAREP1_DM LINE Penelope 1 590 -4 1 751 227 81 54 0 chr2L 21772171 21772208 -1239336 + PROTOP_A DNA P 509 547 -558 1 751 1049 115 0 24 chr2L 21775497 21775666 -1235878 + DNAREP1_DM LINE Penelope 1 165 -429 1 751 964 108 151 0 chr2L 21775676 21775842 -1235702 + DNAREP1_DM LINE Penelope 400 590 -4 1 751 198 0 0 0 chr2L 21776236 21776258 -1235286 + (TC)n Simple_repeat Simple_repeat 1 22 0 1 751 1322 105 317 18 chr2L 21779782 21780074 -1231470 - DNAREP1_DM LINE Penelope 0 594 216 1 751 369 103 29 110 chr2L 21781357 21781500 -1230044 + DNAREP1_DM LINE Penelope 18 193 -401 1 751 401 110 14 0 chr2L 21781564 21781637 -1229907 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 751 243 236 29 80 chr2L 21784092 21784230 -1227314 - DNAREP1_DM LINE Penelope -430 164 34 1 751 21 0 0 0 chr2L 21784874 21784895 -1226649 + AT_rich Low_complexity Low_complexity 1 21 0 1 751 1163 146 88 35 chr2L 21785560 21785938 -1225606 + DNAREP1_DM LINE Penelope 2 335 -259 1 751 257 150 222 12 chr2L 21786033 21786114 -1225430 - DNAREP1_DM LINE Penelope -74 520 423 1 751 864 219 22 82 chr2L 21786135 21786453 -1225091 - DNAREP1_DM LINE Penelope -292 302 4 1 751 55 40 0 0 chr2L 21787774 21787850 -1223694 + AT_rich Low_complexity Low_complexity 1 76 0 1 751 771 74 116 0 chr2L 21788012 21788133 -1223411 + DNAREP1_DM LINE Penelope 3 137 -457 1 751 271 252 20 0 chr2L 21788177 21788190 -1223354 - P_DG DNA P -24 2864 2764 1 751 607 70 0 0 chr2L 21788190 21788276 -1223268 + DNAREP1_DM LINE Penelope 500 585 -9 1 751 1055 118 27 0 chr2L 21788276 21788462 -1223082 - DNAREP1_DM LINE Penelope -403 191 1 1 751 212 250 0 0 chr2L 21789281 21789325 -1222219 + (CATA)n Simple_repeat Simple_repeat 4 47 0 1 751 23 0 0 0 chr2L 21789898 21789921 -1221623 + AT_rich Low_complexity Low_complexity 1 23 0 1 751 332 67 0 0 chr2L 21791071 21791116 -1220428 - DNAREP1_DM LINE Penelope -2 592 548 1 751 313 203 27 0 chr2L 21791365 21791439 -1220105 - DNAREP1_DM LINE Penelope -515 79 4 1 751 189 0 0 0 chr2L 21792818 21792839 -1218705 + (TTTTTA)n Simple_repeat Simple_repeat 5 25 0 1 751 405 199 137 116 chr2L 21793690 21794040 -1217504 + DNAREP1_DM LINE Penelope 2 498 -96 1 751 262 183 28 14 chr2L 21794221 21794293 -1217251 + DNAREP1_DM LINE Penelope 263 335 -259 1 751 1789 102 97 24 chr2L 21795822 21796192 -1215352 + FB4_DM DNA Tc1 1106 1502 -2587 1 751 2530 109 143 21 chr2L 21797350 21797867 -1213677 - DNAREP1_DM LINE Penelope -12 582 3 1 751 36 23 0 0 chr2L 21798080 21798123 -1213421 + AT_rich Low_complexity Low_complexity 1 43 0 1 751 31 26 0 0 chr2L 21800839 21800877 -1210667 + AT_rich Low_complexity Low_complexity 1 38 0 1 751 668 156 171 24 chr2L 21802490 21802654 -1208890 - DNAREP1_DM LINE Penelope -16 578 391 1 751 659 134 488 14 chr2L 21802657 21802876 -1208668 + DNAREP1_DM LINE Penelope 172 494 -100 1 751 225 65 0 0 chr2L 21802907 21802938 -1208606 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 751 36 0 0 0 chr2L 21803721 21803757 -1207787 + AT_rich Low_complexity Low_complexity 1 36 0 1 751 218 32 32 0 chr2L 21803759 21803790 -1207754 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 751 25 31 0 0 chr2L 21803855 21803887 -1207657 + AT_rich Low_complexity Low_complexity 1 32 0 1 751 193 29 59 0 chr2L 21803888 21803922 -1207622 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1 751 24 0 0 0 chr2L 21805303 21805327 -1206217 + AT_rich Low_complexity Low_complexity 1 24 0 1 751 21 36 0 0 chr2L 21807771 21807799 -1203745 + AT_rich Low_complexity Low_complexity 1 28 0 1 751 1361 95 84 32 chr2L 21813798 21814049 -1197495 + DNAREP1_DM LINE Penelope 228 491 -103 1 751 393 48 226 0 chr2L 21814019 21814081 -1197463 - DNAREP1_DM LINE Penelope -69 525 450 1 751 362 168 78 26 chr2L 21814122 21814238 -1197306 - DNAREP1_DM LINE Penelope -241 353 232 1 751 246 178 0 0 chr2L 21820487 21820532 -1191012 + DNAREP1_DM LINE Penelope 17 61 -533 1 751 318 178 41 0 chr2L 21820703 21820776 -1190768 + DNAREP1_DM LINE Penelope 457 532 -62 1 751 22 0 0 0 chr2L 21822319 21822341 -1189203 + AT_rich Low_complexity Low_complexity 1 22 0 1 751 21 0 0 0 chr2L 21822463 21822484 -1189060 + AT_rich Low_complexity Low_complexity 1 21 0 1 751 26 30 0 0 chr2L 21825067 21825100 -1186444 + AT_rich Low_complexity Low_complexity 1 33 0 1 751 246 202 55 22 chr2L 21825419 21825510 -1186034 + DNAREP1_DM LINE Penelope 237 330 -264 1 751 5836 112 43 6 chr2L 21826520 21827505 -1184039 - FB4_DM DNA Tc1 -1330 2759 1739 1 751 217 146 24 0 chr2L 21827561 21827602 -1183942 + (TAATG)n Simple_repeat Simple_repeat 4 45 0 1 751 200 111 28 0 chr2L 21828515 21828551 -1182993 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 751 22 0 0 0 chr2L 21829496 21829518 -1182026 + AT_rich Low_complexity Low_complexity 1 22 0 1 751 27 0 0 0 chr2L 21838663 21838690 -1172854 + AT_rich Low_complexity Low_complexity 1 27 0 1 751 194 0 0 37 chr2L 21844340 21844367 -1167177 + (TATAA)n Simple_repeat Simple_repeat 4 29 0 1 751 237 204 18 18 chr2L 21844414 21844469 -1167075 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 1 751 222 326 21 0 chr2L 21846682 21846777 -1164767 + (CAA)n Simple_repeat Simple_repeat 3 99 0 1 751 192 135 0 0 chr2L 21846874 21846911 -1164633 + (TTC)n Simple_repeat Simple_repeat 2 38 0 1 751 596 147 0 0 chr2L 21850377 21850472 -1161072 - DNAREP1_DM LINE Penelope -499 95 1 1 751 258 209 44 0 chr2L 21852481 21852572 -1158972 + (TA)n Simple_repeat Simple_repeat 2 96 0 1 751 26 50 0 0 chr2L 21852831 21852871 -1158673 + AT_rich Low_complexity Low_complexity 1 40 0 1 751 41 58 0 0 chr2L 21854376 21854445 -1157099 + AT_rich Low_complexity Low_complexity 1 69 0 1 751 231 250 49 49 chr2L 21854740 21854862 -1156682 - DNAREP1_DM LINE Penelope -262 332 211 1 751 183 80 0 0 chr2L 21856827 21856852 -1154692 + (A)n Simple_repeat Simple_repeat 1 25 0 1 751 982 133 75 6 chr2L 21856858 21857032 -1154512 + DNAREP1_DM LINE Penelope 6 191 -403 1 751 1698 97 183 3 chr2L 21857044 21857333 -1154211 + DNAREP1_DM LINE Penelope 254 594 0 1 751 230 174 19 140 chr2L 21858311 21858418 -1153126 - PROTOP_B DNA P -563 590 497 1 751 30 27 0 0 chr2L 21858557 21858594 -1152950 + AT_rich Low_complexity Low_complexity 1 37 0 1 751 22 0 0 0 chr2L 21858680 21858702 -1152842 + AT_rich Low_complexity Low_complexity 1 22 0 1 751 246 156 0 0 chr2L 21860810 21860855 -1150689 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 751 424 192 117 39 chr2L 21862427 21862530 -1149014 + DNAREP1_DM LINE Penelope 376 486 -108 1 751 195 125 0 0 chr2L 21863678 21863718 -1147826 + (ATAGG)n Simple_repeat Simple_repeat 3 42 0 1 751 21 57 0 0 chr2L 21866895 21866930 -1144614 + AT_rich Low_complexity Low_complexity 1 35 0 1 751 204 226 0 0 chr2L 21869124 21869177 -1142367 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 1 751 182 37 37 0 chr2L 21869919 21869946 -1141598 + (CTAAT)n Simple_repeat Simple_repeat 4 31 0 1 751 22 35 0 0 chr2L 21870428 21870457 -1141087 + AT_rich Low_complexity Low_complexity 1 29 0 1 751 23 0 0 0 chr2L 21870913 21870936 -1140608 + AT_rich Low_complexity Low_complexity 1 23 0 1 751 277 235 140 20 chr2L 21872776 21872876 -1138668 - DNAREP1_DM LINE Penelope -104 490 379 1 751 250 218 0 0 chr2L 21873020 21873075 -1138469 - DNAREP1_DM LINE Penelope -532 62 8 1 751 36 40 0 0 chr2L 21874488 21874538 -1137006 + AT_rich Low_complexity Low_complexity 1 50 0 1 751 735 139 26 53 chr2L 21874607 21874759 -1136785 - DNAREP1_DM LINE Penelope -46 548 401 1 751 765 205 150 5 chr2L 21874855 21875075 -1136469 + DNAREP1_DM LINE Penelope 323 574 -20 1 751 337 85 0 21 chr2L 21875172 21875220 -1136324 + DNAREP1_DM LINE Penelope 399 445 -149 1 751 3107 105 98 10 chr2L 21877590 21878099 -1133445 - DNAREP1_DM LINE Penelope -13 581 28 1 751 265 75 24 24 chr2L 21880575 21880616 -1130928 + DNAREP1_DM LINE Penelope 32 72 -522 1 751 697 211 6 47 chr2L 21881531 21881700 -1129844 - DNAREP1_DM LINE Penelope -1 593 432 1 751 309 200 0 0 chr2L 21881742 21881802 -1129742 - DNAREP1_DM LINE Penelope -534 60 1 1 751 25 0 0 0 chr2L 21882655 21882680 -1128864 + AT_rich Low_complexity Low_complexity 1 25 0 1 751 252 0 0 0 chr2L 21886045 21886073 -1125471 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1 751 216 67 0 0 chr2L 21887934 21887964 -1123580 + (CCCGAA)n Simple_repeat Simple_repeat 1 30 0 1 751 221 241 0 33 chr2L 21888216 21888276 -1123268 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 1 752 1005 64 7 0 chr2L 21889365 21889505 -1122039 + DNAREP1_DM LINE Penelope 1 141 -453 1 752 768 151 96 0 chr2L 21889504 21889650 -1121894 + DNAREP1_DM LINE Penelope 435 594 0 1 752 225 277 0 0 chr2L 21890238 21890303 -1121241 + T-rich Low_complexity Low_complexity 1 65 0 1 752 46 0 0 0 chr2L 21892232 21892278 -1119266 + AT_rich Low_complexity Low_complexity 1 46 0 1 752 195 184 0 0 chr2L 21895856 21895894 -1115650 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 752 231 114 0 0 chr2L 21899473 21899508 -1112036 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 752 1029 127 111 21 chr2L 21900273 21900686 -1110858 + DNAREP1_DM LINE Penelope 1 492 -102 1 752 327 171 33 132 chr2L 21900834 21900955 -1110589 - DNAREP1_DM LINE Penelope -119 475 367 1 752 25 0 0 0 chr2L 21900989 21901014 -1110530 + AT_rich Low_complexity Low_complexity 1 25 0 1 752 22 70 0 0 chr2L 21901261 21901304 -1110240 + AT_rich Low_complexity Low_complexity 1 43 0 1 752 183 80 0 0 chr2L 21901800 21901825 -1109719 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 752 284 191 79 0 chr2L 21902527 21902590 -1108954 - DNAREP1_DM LINE Penelope -107 487 420 1 752 423 117 99 17 chr2L 21902629 21902733 -1108811 - DNAREP1_DM LINE Penelope -261 333 232 1 752 25 75 0 0 chr2L 21904203 21904256 -1107288 + AT_rich Low_complexity Low_complexity 1 53 0 1 752 25 31 0 0 chr2L 21905884 21905916 -1105628 + AT_rich Low_complexity Low_complexity 1 32 0 1 752 413 213 0 0 chr2L 21908397 21908491 -1103053 + DNAREP1_DM LINE Penelope 1 94 -500 1 752 27 0 0 0 chr2L 21908918 21908945 -1102599 + AT_rich Low_complexity Low_complexity 1 27 0 1 752 314 104 0 0 chr2L 21911766 21911814 -1099730 - DNAREP1_DM LINE Penelope -47 547 500 1 752 2383 83 0 8 chr2L 21911809 21912173 -1099371 - FB4_DM DNA Tc1 -1329 2760 2400 1 752 4037 98 91 11 chr2L 21912171 21913275 -1098269 - FB4_DM DNA Tc1 -1794 2295 1104 1 752 1532 127 4 4 chr2L 21913265 21913518 -1098026 - DNAREP1_DM LINE Penelope -104 490 238 1 752 770 103 0 31 chr2L 21913557 21913687 -1097857 - DNAREP1_DM LINE Penelope -468 126 1 1 752 23 0 0 0 chr2L 21915594 21915617 -1095927 + AT_rich Low_complexity Low_complexity 1 23 0 1 752 21 0 0 0 chr2L 21915932 21915953 -1095591 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 39 38 0 0 chr2L 21919274 21919327 -1092217 + AT_rich Low_complexity Low_complexity 1 53 0 1 752 25 51 0 0 chr2L 21919485 21919524 -1092020 + AT_rich Low_complexity Low_complexity 1 39 0 1 752 267 146 0 0 chr2L 21919714 21919769 -1091775 + (CAAG)n Simple_repeat Simple_repeat 3 57 0 1 752 2195 123 134 62 chr2L 21922920 21923472 -1088072 - DNAREP1_DM LINE Penelope 0 594 3 1 752 26 0 0 0 chr2L 21924168 21924194 -1087350 + AT_rich Low_complexity Low_complexity 1 26 0 1 752 26 0 0 0 chr2L 21924354 21924380 -1087164 + AT_rich Low_complexity Low_complexity 1 26 0 1 752 21 0 0 0 chr2L 21924616 21924637 -1086907 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 934 134 135 24 chr2L 21924998 21925205 -1086339 + DNAREP1_DM LINE Penelope 270 499 -95 1 752 23 0 0 0 chr2L 21926218 21926241 -1085303 + AT_rich Low_complexity Low_complexity 1 23 0 1 752 4475 50 131 9 chr2L 21927471 21928526 -1083018 + G4_DM LINE Jockey 2632 3816 -40 1 752 23 92 0 0 chr2L 21928618 21928683 -1082861 + AT_rich Low_complexity Low_complexity 1 65 0 1 752 380 123 14 0 chr2L 21929110 21929183 -1082361 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 752 230 238 39 39 chr2L 21929610 21929737 -1081807 + DNAREP1_DM LINE Penelope 191 317 -277 1 752 285 140 113 41 chr2L 21929778 21929875 -1081669 + DNAREP1_DM LINE Penelope 182 285 -309 1 752 21 0 0 0 chr2L 21931734 21931755 -1079789 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 22 0 0 0 chr2L 21932732 21932754 -1078790 + AT_rich Low_complexity Low_complexity 1 22 0 1 752 2022 96 288 9 chr2L 21936115 21936559 -1074985 - DNAREP1_DM LINE Penelope -26 568 1 1 752 816 187 128 25 chr2L 21936626 21936900 -1074644 + DNAREP1_DM LINE Penelope 4 305 -289 1 752 377 190 317 3 chr2L 21937572 21937713 -1073831 - DNAREP1_DM LINE Penelope -1 593 422 1 752 470 68 176 0 chr2L 21938499 21938573 -1072971 - DNAREP1_DM LINE Penelope 0 594 508 1 752 413 141 0 0 chr2L 21938572 21938643 -1072901 - DNAREP1_DM LINE Penelope -483 111 41 1 752 24 0 0 0 chr2L 21938714 21938738 -1072806 + AT_rich Low_complexity Low_complexity 1 24 0 1 752 374 127 0 0 chr2L 21940046 21940109 -1071435 - DNAREP1_DM LINE Penelope 0 594 532 1 752 518 123 325 15 chr2L 21940248 21940439 -1071105 - DNAREP1_DM LINE Penelope -149 445 196 1 752 363 111 0 0 chr2L 21940439 21940493 -1071051 - DNAREP1_DM LINE Penelope -537 57 4 1 752 41 48 0 0 chr2L 21941335 21941397 -1070147 + AT_rich Low_complexity Low_complexity 1 62 0 1 752 286 246 0 0 chr2L 21941975 21942036 -1069508 - DNAREP1_DM LINE Penelope -165 429 369 1 752 22 56 0 0 chr2L 21942036 21942072 -1069472 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 810 68 203 0 chr2L 21942110 21942243 -1069301 - DNAREP1_DM LINE Penelope -133 461 302 1 752 679 85 0 0 chr2L 21942269 21942363 -1069181 - DNAREP1_DM LINE Penelope -500 94 1 1 752 347 141 233 12 chr2L 21942469 21942555 -1068989 + DNAREP1_DM LINE Penelope 439 543 -51 1 752 232 48 48 0 chr2L 21943973 21944015 -1067529 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 752 591 208 75 52 chr2L 21944040 21944253 -1067291 + DNAREP1_DM LINE Penelope 4 221 -373 1 752 258 167 0 0 chr2L 21946650 21946698 -1064846 - DNAREP1_DM LINE Penelope -149 445 398 1 752 319 167 0 0 chr2L 21947553 21947613 -1063931 - DNAREP1_DM LINE Penelope -533 61 2 1 752 183 220 0 0 chr2L 21949255 21949305 -1062239 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 1 752 327 48 0 0 chr2L 21949784 21949826 -1061718 + DNAREP1_DM LINE Penelope 1 42 -552 1 752 335 211 120 37 chr2L 21950581 21950689 -1060855 - DNAREP1_DM LINE Penelope -102 492 376 1 752 23 0 0 0 chr2L 21950750 21950773 -1060771 + AT_rich Low_complexity Low_complexity 1 23 0 1 752 382 103 0 0 chr2L 21954136 21954194 -1057350 - DNAREP1_DM LINE Penelope -536 58 1 1 752 345 226 0 0 chr2L 21955043 21955149 -1056395 + ROO_I LTR Pao 640 745 -7511 1 752 465 189 0 0 chr2L 21957169 21957275 -1054269 + DNAREP1_DM LINE Penelope 485 590 -4 1 752 22 35 0 0 chr2L 21961001 21961030 -1050514 + AT_rich Low_complexity Low_complexity 1 29 0 1 752 195 69 0 0 chr2L 21962181 21962210 -1049334 + (A)n Simple_repeat Simple_repeat 1 29 0 1 752 271 89 36 0 chr2L 21963505 21963561 -1047983 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 752 22 35 0 0 chr2L 21968434 21968463 -1043081 + AT_rich Low_complexity Low_complexity 1 29 0 1 752 1107 150 237 11 chr2L 21968693 21968963 -1042581 + DNAREP1_DM LINE Penelope 211 541 -53 1 752 231 36 0 0 chr2L 21968955 21968983 -1042561 + DNAREP1_DM LINE Penelope 567 594 0 1 752 387 244 295 20 chr2L 21968981 21969325 -1042219 + DNAREP1_DM LINE Penelope 128 565 -29 1 752 275 139 0 0 chr2L 21971433 21971476 -1040068 - DNAREP1_DM LINE Penelope 0 594 552 1 752 635 220 67 32 chr2L 21971510 21971780 -1039764 - DNAREP1_DM LINE Penelope -186 408 2 1 752 591 92 11 0 chr2L 21972048 21972135 -1039409 + DNAREP1_DM LINE Penelope 1 88 -506 1 752 1211 67 160 0 chr2L 21972122 21972316 -1039228 + DNAREP1_DM LINE Penelope 370 594 0 1 752 1008 139 271 24 chr2L 21972829 21973130 -1038414 + DNAREP1_DM LINE Penelope 16 390 -204 1 752 183 80 0 0 chr2L 21973532 21973557 -1037987 + (ATG)n Simple_repeat Simple_repeat 2 26 0 1 752 22 0 0 0 chr2L 21976759 21976781 -1034763 + AT_rich Low_complexity Low_complexity 1 22 0 1 752 31 26 0 0 chr2L 21977804 21977842 -1033702 + AT_rich Low_complexity Low_complexity 1 38 0 1 752 489 157 230 36 chr2L 21978489 21978720 -1032824 + DNAREP1_DM LINE Penelope 72 332 -262 1 752 307 179 60 60 chr2L 21978759 21978842 -1032702 + DNAREP1_DM LINE Penelope 512 594 0 1 752 22 56 0 0 chr2L 21979097 21979133 -1032411 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 32 43 0 0 chr2L 21979607 21979653 -1031891 + AT_rich Low_complexity Low_complexity 1 46 0 1 752 33 43 0 0 chr2L 21979739 21979786 -1031758 + AT_rich Low_complexity Low_complexity 1 47 0 1 752 21 71 0 0 chr2L 21980736 21980778 -1030766 + AT_rich Low_complexity Low_complexity 1 42 0 1 752 1529 91 311 7 chr2L 21981015 21981315 -1030229 - DNAREP1_DM LINE Penelope 0 594 204 1 752 318 71 0 0 chr2L 21981405 21981447 -1030097 - DNAREP1_DM LINE Penelope -552 42 1 1 752 3766 0 0 0 chr2L 21981737 21982165 -1029379 - ROO_LTR LTR Pao 0 428 1 1 752 70377 1 1 0 chr2L 21982165 21990415 -1021129 - ROO_I LTR Pao 0 8256 1 1 752 3766 0 0 0 chr2L 21990415 21990843 -1020701 - ROO_LTR LTR Pao 0 428 1 1 752 747 141 263 5 chr2L 21994214 21994400 -1017144 + DNAREP1_DM LINE Penelope 190 423 -171 1 752 355 109 0 0 chr2L 21994406 21994461 -1017083 + DNAREP1_DM LINE Penelope 540 594 0 1 752 537 115 11 0 chr2L 21997856 21997943 -1013601 + DNAREP1_DM LINE Penelope 9 96 -498 1 752 976 148 74 0 chr2L 21997953 21998155 -1013389 + DNAREP1_DM LINE Penelope 356 572 -22 1 752 1300 137 341 24 chr2L 21998845 21999255 -1012289 - DNAREP1_DM LINE Penelope -1 593 54 1 752 1391 173 52 31 chr2L 21999318 21999648 -1011896 + DNAREP1_DM LINE Penelope 130 594 0 1 752 2171 150 96 57 chr2L 22002828 22003388 -1008156 - DNAREP1_DM LINE Penelope -1 593 12 1 752 51 0 0 0 chr2L 22003982 22004033 -1007511 + AT_rich Low_complexity Low_complexity 1 51 0 1 752 263 244 114 30 chr2L 22004267 22004398 -1007146 - DNAREP1_DM LINE Penelope -452 142 1 1 752 5431 81 73 35 chr2L 22004568 22005447 -1006097 - Mariner2_DM DNA Tc1 0 912 1 1 752 492 186 122 54 chr2L 22006142 22006290 -1005254 + DNAREP1_DM LINE Penelope 89 246 -348 1 752 667 163 50 0 chr2L 22006297 22006438 -1005106 + DNAREP1_DM LINE Penelope 1 148 -446 1 752 1040 129 204 25 chr2L 22006485 22006769 -1004775 + DNAREP1_DM LINE Penelope 126 594 0 1 752 618 203 229 14 chr2L 22006922 22007132 -1004412 + DNAREP1_DM LINE Penelope 276 530 -64 1 752 185 108 27 0 chr2L 22007972 22008009 -1003535 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 752 2045 169 52 5 chr2L 22009274 22009721 -1001823 + DNAREP1_DM LINE Penelope 102 569 -25 1 752 22 35 0 0 chr2L 22013742 22013771 -997773 + AT_rich Low_complexity Low_complexity 1 29 0 1 752 808 162 175 48 chr2L 22014646 22015076 -996468 + DMCR1A LINE CR1 3353 3893 -577 1 752 277 192 0 0 chr2L 22015074 22015126 -996418 - DMCR1A LINE CR1 -32 4438 4387 1 752 29 47 0 0 chr2L 22017705 22017748 -993796 + AT_rich Low_complexity Low_complexity 1 43 0 1 752 928 150 211 11 chr2L 22017995 22018364 -993180 - DNAREP1_DM LINE Penelope -151 443 1 1 752 25 0 0 0 chr2L 22018404 22018429 -993115 + AT_rich Low_complexity Low_complexity 1 25 0 1 752 192 77 0 0 chr2L 22018813 22018839 -992705 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 753 35 71 0 0 chr2L 22023262 22023332 -988212 + AT_rich Low_complexity Low_complexity 1 70 0 1 753 1241 66 9 0 chr2L 22026777 22026992 -984552 + (TTAAA)n Simple_repeat Simple_repeat 1 217 0 1 753 27 29 0 0 chr2L 22029500 22029534 -982010 + AT_rich Low_complexity Low_complexity 1 34 0 1 753 188 170 19 0 chr2L 22030007 22030060 -981484 + (CAG)n Simple_repeat Simple_repeat 1 54 0 1 753 614 155 0 0 chr2L 22030467 22030570 -980974 + DNAREP1_DM LINE Penelope 2 104 -490 1 753 826 79 164 0 chr2L 22030587 22030727 -980817 + DNAREP1_DM LINE Penelope 432 594 0 1 753 208 147 0 0 chr2L 22031296 22031330 -980214 + (ATG)n Simple_repeat Simple_repeat 1 34 0 1 753 329 197 15 0 chr2L 22031606 22031672 -979872 + DNAREP1_DM LINE Penelope 4 70 -524 1 753 308 117 167 0 chr2L 22034923 22034983 -976561 + DNAREP1_DM LINE Penelope 33 102 -492 1 753 258 54 0 0 chr2L 22036311 22036348 -975196 + DNAREP1_DM LINE Penelope 209 245 -349 1 753 265 109 43 0 chr2L 22036356 22036402 -975142 + DNAREP1_DM LINE Penelope 494 541 -53 1 753 196 0 0 105 chr2L 22036512 22036550 -974994 + (TAA)n Simple_repeat Simple_repeat 3 36 0 1 753 280 204 0 0 chr2L 22036584 22036638 -974906 + DNAREP1_DM LINE Penelope 433 486 -108 1 753 528 111 11 43 chr2L 22037525 22037619 -973925 - DNAREP1_DM LINE Penelope -107 487 397 1 753 24 53 0 0 chr2L 22038977 22039015 -972529 + AT_rich Low_complexity Low_complexity 1 38 0 1 753 209 151 36 36 chr2L 22044420 22044475 -967069 + (CTTTA)n Simple_repeat Simple_repeat 2 56 0 1 753 180 77 0 0 chr2L 22044509 22044535 -967009 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 753 1504 92 83 28 chr2L 22045510 22045831 -965713 - DNAREP1_DM LINE Penelope -1 593 217 1 753 434 104 232 95 chr2L 22046463 22046589 -964955 - DNAREP1_DM LINE Penelope -55 539 418 1 753 290 239 0 0 chr2L 22046685 22046756 -964788 - DNAREP1_DM LINE Penelope -523 71 1 1 753 303 158 30 40 chr2L 22047278 22047377 -964167 + (TTAAA)n Simple_repeat Simple_repeat 3 100 0 1 753 249 253 24 24 chr2L 22047752 22047837 -963707 + DMCR1A LINE CR1 3005 3089 -1381 1 753 44 20 0 0 chr2L 22047941 22047992 -963552 + AT_rich Low_complexity Low_complexity 1 51 0 1 753 1432 119 125 42 chr2L 22048303 22048592 -962952 - DNAREP1_DM LINE Penelope 0 594 282 1 753 766 284 25 21 chr2L 22048593 22048877 -962667 + LINEJ1_DM LINE Jockey 3590 3874 -1146 1 753 380 292 153 31 chr2L 22048859 22049219 -962325 + Jockey2 LINE Jockey 2814 3217 -211 1 753 825 141 15 66 chr2L 22049366 22049563 -961981 - DNAREP1_DM LINE Penelope -407 187 1 1 753 372 163 103 11 chr2L 22051706 22051793 -959751 - DNAREP1_DM LINE Penelope 0 594 500 1 753 1503 113 189 31 chr2L 22051942 22052455 -959089 + DNAREP1_DM LINE Penelope 1 594 0 1 753 22 0 0 0 chr2L 22052646 22052668 -958876 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 485 146 0 0 chr2L 22052942 22053038 -958506 + BS LINE Jockey 5016 5111 -15 1 753 1096 134 104 19 chr2L 22053116 22053528 -958016 - DNAREP1_DM LINE Penelope 0 594 1 1 753 297 305 45 13 chr2L 22053542 22053698 -957846 - DNAREP1_DM LINE Penelope -138 456 296 1 753 35 78 0 0 chr2L 22053846 22053923 -957621 + AT_rich Low_complexity Low_complexity 1 77 0 1 753 22 56 0 0 chr2L 22055305 22055341 -956203 + AT_rich Low_complexity Low_complexity 1 36 0 1 753 23 78 0 0 chr2L 22058719 22058770 -952774 + AT_rich Low_complexity Low_complexity 1 51 0 1 753 259 146 55 0 chr2L 22058971 22059026 -952518 - DNAREP1_DM LINE Penelope 0 594 537 1 753 322 176 20 133 chr2L 22059041 22059139 -952405 - DNAREP1_DM LINE Penelope -135 459 373 1 753 415 131 0 0 chr2L 22059199 22059260 -952284 - DNAREP1_DM LINE Penelope -533 61 1 1 753 306 221 54 65 chr2L 22059365 22059457 -952087 - DNAREP1_DM LINE Penelope -486 108 18 1 753 31 0 0 0 chr2L 22059536 22059567 -951977 + AT_rich Low_complexity Low_complexity 1 31 0 1 753 1674 115 66 17 chr2L 22059756 22060057 -951487 - DNAREP1_DM LINE Penelope 0 594 279 1 753 538 104 0 0 chr2L 22060044 22060121 -951423 - DNAREP1_DM LINE Penelope -517 77 1 1 753 1266 104 75 9 chr2L 22062593 22062806 -948738 + DNAREP1_DM LINE Penelope 368 594 0 1 753 554 138 110 28 chr2L 22063245 22063434 -948110 - DNAREP1_DM LINE Penelope 0 594 339 1 753 647 121 9 0 chr2L 22063466 22063582 -947962 - DNAREP1_DM LINE Penelope -444 150 34 1 753 761 167 134 56 chr2L 22063660 22063876 -947668 - DNAREP1_DM LINE Penelope 0 594 362 1 753 1628 104 11 4 chr2L 22067380 22067650 -943894 + DNAREP1_DM LINE Penelope 1 272 -322 1 753 650 148 34 27 chr2L 22067642 22067788 -943756 + DNAREP1_DM LINE Penelope 163 309 -285 1 753 28 0 0 0 chr2L 22067788 22067816 -943728 + AT_rich Low_complexity Low_complexity 1 28 0 1 753 1910 62 90 30 chr2L 22067829 22068130 -943414 + DNAREP1_DM LINE Penelope 276 594 0 1 753 437 146 0 24 chr2L 22068174 22068258 -943286 - DNAREP1_DM LINE Penelope -512 82 1 1 753 2276 132 76 142 chr2L 22070457 22071092 -940452 + DNAREP1_DM LINE Penelope 1 593 -1 1 753 225 159 0 0 chr2L 22072458 22072502 -939042 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 1 753 266 219 110 0 chr2L 22072941 22073014 -938530 + DNAREP1_DM LINE Penelope 501 581 -13 1 753 478 159 0 0 chr2L 22073046 22073134 -938410 + DNAREP1_DM LINE Penelope 506 593 -1 1 753 242 232 0 0 chr2L 22073165 22073221 -938323 + DNAREP1_DM LINE Penelope 438 493 -101 1 753 288 0 0 0 chr2L 22076238 22076273 -935271 - DNAREP1_DM LINE Penelope -24 570 536 1 753 1006 194 51 90 chr2L 22076271 22076605 -934939 - DNAREP1_DM LINE Penelope -272 322 2 1 753 1486 72 127 0 chr2L 22076792 22077028 -934516 + Invader2_LTR LTR Gypsy 1 266 0 1 753 373 163 98 14 chr2L 22077028 22077132 -934412 + DM297_LTR LTR Gypsy 300 470 -4 1 753 24 77 0 0 chr2L 22077515 22077567 -933977 + AT_rich Low_complexity Low_complexity 1 52 0 1 753 228 35 0 0 chr2L 22078652 22078681 -932863 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 753 359 208 119 0 chr2L 22079277 22079378 -932166 - DNAREP1_DM LINE Penelope -141 453 341 1 753 38 39 0 0 chr2L 22079419 22079471 -932073 + AT_rich Low_complexity Low_complexity 1 52 0 1 753 21 0 0 0 chr2L 22079572 22079593 -931951 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 1368 89 86 35 chr2L 22080956 22081188 -930356 - DNAREP1_DM LINE Penelope 0 594 351 1 753 403 234 84 0 chr2L 22082234 22082341 -929203 - DNAREP1_DM LINE Penelope -111 483 368 1 753 343 58 19 0 chr2L 22082458 22082510 -929034 + DNAREP1_DM LINE Penelope 542 594 0 1 753 229 222 0 0 chr2L 22082696 22082741 -928803 + DNAREP1_DM LINE Penelope 27 71 -523 1 753 26 0 0 0 chr2L 22082783 22082809 -928735 + AT_rich Low_complexity Low_complexity 1 26 0 1 753 449 213 213 0 chr2L 22082971 22083107 -928437 + DNAREP1_DM LINE Penelope 430 594 0 1 753 771 186 142 52 chr2L 22083842 22084075 -927469 - DNAREP1_DM LINE Penelope 0 594 341 1 753 22 35 0 0 chr2L 22085502 22085531 -926013 + AT_rich Low_complexity Low_complexity 1 29 0 1 753 699 95 495 21 chr2L 22085595 22085829 -925715 + DNAREP1_DM LINE Penelope 232 576 -18 1 753 895 161 0 0 chr2L 22086817 22086997 -924547 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 753 394 0 0 162 chr2L 22086929 22087139 -924405 + (TATAG)n Simple_repeat Simple_repeat 3 178 0 1 753 7873 100 73 4 chr2L 22087143 22088443 -923101 + FB4_DM DNA Tc1 1367 2756 -1333 1 753 2317 79 32 24 chr2L 22088482 22088859 -922685 - TRANSIB2 DNA Transib 0 2844 2465 1 753 7537 48 98 20 chr2L 22088834 22089931 -921613 - TRANSIB2 DNA Transib -525 2319 1137 1 753 1711 47 0 45 chr2L 22089961 22090207 -921337 - G5A_DM LINE Jockey -3 2838 2604 1 753 1466 35 259 4 chr2L 22090212 22090440 -921104 - TRANSIB2 DNA Transib -1700 1144 859 1 753 528 148 19 0 chr2L 22090792 22090900 -920644 - DMCR1A LINE CR1 -19 4451 4342 1 753 1519 54 117 4 chr2L 22090955 22091195 -920349 - G4_DM LINE Jockey 0 3856 3590 1 753 1245 49 0 6 chr2L 22091217 22091380 -920164 - G4_DM LINE Jockey -382 3474 3313 1 753 1094 141 83 24 chr2L 22091372 22091626 -919918 - DNAREP1_DM LINE Penelope -325 269 1 1 753 833 318 149 10 chr2L 22091733 22092429 -919115 - G5_DM LINE Jockey -183 4673 3881 1 753 37 0 0 0 chr2L 22092528 22092565 -918979 + AT_rich Low_complexity Low_complexity 1 37 0 1 753 237 55 0 53 chr2L 22093027 22093065 -918479 - DNAREP1_DM LINE Penelope 0 594 559 1 753 672 107 29 0 chr2L 22093062 22093165 -918379 - DNAREP1_DM LINE Penelope -487 107 2 1 753 580 157 249 6 chr2L 22094128 22094301 -917243 - PROTOP DNA P -1911 2569 2355 1 753 213 213 0 0 chr2L 22094395 22094442 -917102 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1 753 741 246 93 15 chr2L 22094538 22094806 -916738 - PROTOP DNA P -2823 1657 1369 1 753 2200 95 191 64 chr2L 22094831 22095350 -916194 - DNAREP1_DM LINE Penelope -9 585 1 1 753 23 33 0 0 chr2L 22097648 22097678 -913866 + AT_rich Low_complexity Low_complexity 1 30 0 1 753 712 179 147 15 chr2L 22097842 22098040 -913504 + DNAREP1_DM LINE Penelope 370 593 -1 1 753 23 0 0 0 chr2L 22100682 22100705 -910839 + AT_rich Low_complexity Low_complexity 1 23 0 1 753 337 143 0 0 chr2L 22101358 22101414 -910130 + DNAREP1_DM LINE Penelope 539 594 0 1 753 273 173 13 26 chr2L 22102256 22102333 -909211 - DNAREP1_DM LINE Penelope -336 258 183 1 753 192 158 0 0 chr2L 22103027 22103065 -908479 + (TCTCTG)n Simple_repeat Simple_repeat 3 40 0 1 753 24 0 0 0 chr2L 22104420 22104444 -907100 + AT_rich Low_complexity Low_complexity 1 24 0 1 753 602 102 234 0 chr2L 22104444 22104572 -906972 - DNAREP1_DM LINE Penelope -29 565 408 1 753 200 219 16 0 chr2L 22104744 22104808 -906736 + A-rich Low_complexity Low_complexity 4 68 0 1 753 24 0 0 0 chr2L 22104891 22104915 -906629 + AT_rich Low_complexity Low_complexity 1 24 0 1 753 25 51 0 0 chr2L 22105438 22105477 -906067 + AT_rich Low_complexity Low_complexity 1 39 0 1 753 36 23 0 0 chr2L 22105590 22105633 -905911 + AT_rich Low_complexity Low_complexity 1 43 0 1 753 532 155 103 0 chr2L 22105683 22105799 -905745 - DNAREP1_DM LINE Penelope -98 496 369 1 753 27 29 0 0 chr2L 22107382 22107416 -904128 + AT_rich Low_complexity Low_complexity 1 34 0 1 753 507 106 35 0 chr2L 22107547 22107632 -903912 + Transib-N1_DM DNA Transib 1 88 -426 1 753 325 189 67 0 chr2L 22107636 22107726 -903818 + Transib-N1_DM DNA Transib 20 115 -399 1 753 591 97 142 0 chr2L 22110652 22110765 -900779 - DNAREP1_DM LINE Penelope 0 594 466 1 753 243 150 0 0 chr2L 22110777 22110817 -900727 + DNAREP1_DM LINE Penelope 275 314 -280 1 753 4823 158 85 53 chr2L 22110988 22112064 -899480 - DM297_I LTR Gypsy -4658 1509 447 1 753 22 35 0 0 chr2L 22112064 22112093 -899451 + AT_rich Low_complexity Low_complexity 1 29 0 1 753 4823 158 85 53 chr2L 22112093 22112543 -899001 - DM297_I LTR Gypsy -4658 446 1 1 753 1221 198 52 74 chr2L 22112572 22112992 -898552 - DM297_LTR LTR Gypsy -3 411 1 1 753 497 34 0 0 chr2L 22113045 22113104 -898440 - PROTOP DNA P -1 4479 4420 1 753 3912 48 48 2 chr2L 22113101 22114264 -897280 - PROTOP DNA P -375 4105 3114 1 753 22 56 0 0 chr2L 22114264 22114300 -897244 + AT_rich Low_complexity Low_complexity 1 36 0 1 753 1712 84 192 0 chr2L 22114300 22114644 -896900 - PROTOP DNA P -3748 732 321 1 753 937 87 53 0 chr2L 22114645 22114795 -896749 + PROTOP_B DNA P 321 478 -675 1 753 1015 154 88 27 chr2L 22115064 22115684 -895860 + DNAREP1_DM LINE Penelope 11 488 -106 1 753 2025 77 3 3 chr2L 22115680 22115980 -895564 - FB4_DM DNA Tc1 -1333 2756 2457 1 753 5003 81 60 2 chr2L 22115978 22117150 -894394 - FB4_DM DNA Tc1 -1736 2353 1114 1 753 3585 110 67 17 chr2L 22117152 22117737 -893807 + IVK_DM LINE I 381 994 -4408 1 753 2243 80 32 3 chr2L 22117750 22118089 -893455 + IVK_DM LINE I 1146 1494 -3908 1 753 5357 94 44 4 chr2L 22118088 22118876 -892668 + IVK_DM LINE I 3786 4605 -797 1 753 4975 29 151 1 chr2L 22118876 22119572 -891972 + FB4_DM DNA Tc1 1 800 -3289 1 753 5882 39 203 18 chr2L 22119811 22120750 -890794 - FB4_DM DNA Tc1 -2976 1113 1 1 753 1362 102 10 0 chr2L 22120751 22120948 -890596 + IVK_DM LINE I 4598 4796 -606 1 753 189 0 0 0 chr2L 22121466 22121487 -890057 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1 753 612 110 85 0 chr2L 22121487 22121605 -889939 - I_DM LINE I -772 5459 5332 1 753 710 138 0 0 chr2L 22124323 22124432 -887112 + DNAREP1_DM LINE Penelope 3 111 -483 1 753 271 232 0 0 chr2L 22124626 22124682 -886862 + DNAREP1_DM LINE Penelope 7 62 -532 1 753 225 219 0 0 chr2L 22125284 22125325 -886219 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 753 482 177 42 0 chr2L 22125326 22125422 -886122 - DNAREP1_DM LINE Penelope 0 594 495 1 753 31 0 0 0 chr2L 22125694 22125725 -885819 + AT_rich Low_complexity Low_complexity 1 31 0 1 753 275 122 41 0 chr2L 22126147 22126196 -885348 + DNAREP1_DM LINE Penelope 543 593 -1 1 753 25 0 0 0 chr2L 22126978 22127003 -884541 + AT_rich Low_complexity Low_complexity 1 25 0 1 753 22 70 0 0 chr2L 22127172 22127215 -884329 + AT_rich Low_complexity Low_complexity 1 43 0 1 753 21 0 0 0 chr2L 22127454 22127475 -884069 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 1419 125 216 64 chr2L 22127740 22128171 -883373 - DNAREP1_DM LINE Penelope 0 594 112 1 753 333 113 226 0 chr2L 22130433 22130495 -881049 - DNAREP1_DM LINE Penelope -74 520 445 1 753 1212 132 88 0 chr2L 22130493 22130721 -880823 - DNAREP1_DM LINE Penelope -342 252 5 1 753 25 0 0 0 chr2L 22131125 22131150 -880394 + AT_rich Low_complexity Low_complexity 1 25 0 1 753 23 0 0 0 chr2L 22131833 22131856 -879688 + AT_rich Low_complexity Low_complexity 1 23 0 1 753 343 175 0 0 chr2L 22132146 22132203 -879341 + DNAREP1_DM LINE Penelope 1 57 -537 1 753 41 21 0 0 chr2L 22132393 22132441 -879103 + AT_rich Low_complexity Low_complexity 1 48 0 1 753 1131 122 96 10 chr2L 22132523 22132721 -878823 + DNAREP1_DM LINE Penelope 367 581 -13 1 753 436 152 287 35 chr2L 22132861 22133004 -878540 - DNAREP1_DM LINE Penelope -98 496 318 1 753 25 0 0 0 chr2L 22133387 22133412 -878132 + AT_rich Low_complexity Low_complexity 1 25 0 1 753 1829 90 7 0 chr2L 22133545 22133845 -877699 + S_DM DNA Tc1 1435 1736 0 1 753 30 45 0 0 chr2L 22135118 22135162 -876382 + AT_rich Low_complexity Low_complexity 1 44 0 1 753 221 115 77 0 chr2L 22135358 22135410 -876134 + (TTATA)n Simple_repeat Simple_repeat 5 60 0 1 753 229 164 0 82 chr2L 22136193 22136266 -875278 + A-rich Low_complexity Low_complexity 3 69 0 1 753 368 191 28 84 chr2L 22138081 22138224 -873320 - DNAREP1_DM LINE Penelope -417 177 43 1 753 22 0 0 0 chr2L 22138293 22138315 -873229 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 198 0 0 0 chr2L 22139690 22139712 -871832 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1 753 24 0 0 0 chr2L 22139749 22139773 -871771 + AT_rich Low_complexity Low_complexity 1 24 0 1 753 21 57 0 0 chr2L 22139898 22139933 -871611 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 274 344 6 18 chr2L 22144280 22144443 -867101 + (TATATG)n Simple_repeat Simple_repeat 3 163 0 1 753 640 119 108 35 chr2L 22145034 22145240 -866304 + DNAREP1_DM LINE Penelope 35 391 -203 1 753 681 123 228 21 chr2L 22145279 22145512 -866032 - DNAREP1_DM LINE Penelope -309 285 5 1 753 201 212 15 15 chr2L 22147153 22147220 -864324 + (TAA)n Simple_repeat Simple_repeat 3 69 0 1 753 373 187 0 51 chr2L 22148061 22148140 -863404 + DNAREP1_DM LINE Penelope 5 79 -515 1 753 403 140 0 0 chr2L 22148175 22148232 -863312 + DNAREP1_DM LINE Penelope 5 61 -533 1 753 344 152 76 0 chr2L 22148268 22148334 -863210 + DNAREP1_DM LINE Penelope 524 594 0 1 753 205 283 0 0 chr2L 22148983 22149029 -862515 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1 753 195 204 0 0 chr2L 22149317 22149366 -862178 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 1 753 4721 98 15 3 chr2L 22149903 22150616 -860928 - S_DM DNA Tc1 -1014 722 1 1 754 24 32 0 0 chr2L 22151180 22151211 -860333 + AT_rich Low_complexity Low_complexity 1 31 0 1 754 21 36 0 0 chr2L 22153079 22153107 -858437 + AT_rich Low_complexity Low_complexity 1 28 0 1 754 195 129 0 0 chr2L 22153141 22153172 -858372 + (CATATA)n Simple_repeat Simple_repeat 1 31 0 1 754 1566 112 97 23 chr2L 22154110 22154493 -857051 - DNAREP1_DM LINE Penelope -39 555 19 1 754 360 64 0 0 chr2L 22154716 22154763 -856781 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 754 280 247 101 0 chr2L 22156162 22156251 -855293 - DNAREP1_DM LINE Penelope -130 464 367 1 754 450 194 28 28 chr2L 22156362 22156468 -855076 - DNAREP1_DM LINE Penelope -481 113 8 1 754 612 260 122 42 chr2L 22157175 22157512 -854032 - DNAREP1_DM LINE Penelope -70 524 161 1 754 21 0 0 0 chr2L 22158902 22158923 -852621 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 24 0 0 0 chr2L 22158951 22158975 -852569 + AT_rich Low_complexity Low_complexity 1 24 0 1 754 344 89 0 0 chr2L 22159422 22159467 -852077 - DNAREP1_DM LINE Penelope -535 59 15 1 754 21 36 0 0 chr2L 22159742 22159770 -851774 + AT_rich Low_complexity Low_complexity 1 28 0 1 754 268 224 15 15 chr2L 22159817 22159885 -851659 - DNAREP1_DM LINE Penelope -148 446 379 1 754 246 119 24 0 chr2L 22159967 22160009 -851535 - DNAREP1_DM LINE Penelope -540 54 12 1 754 30 0 0 0 chr2L 22161323 22161353 -850191 + AT_rich Low_complexity Low_complexity 1 30 0 1 754 24 0 0 0 chr2L 22161652 22161676 -849868 + AT_rich Low_complexity Low_complexity 1 24 0 1 754 3603 101 43 16 chr2L 22163228 22163804 -847740 - DNAREP1_DM LINE Penelope -2 592 1 1 754 23 33 0 0 chr2L 22165532 22165562 -845982 + AT_rich Low_complexity Low_complexity 1 30 0 1 754 29 98 0 0 chr2L 22165956 22166048 -845496 + AT_rich Low_complexity Low_complexity 1 92 0 1 754 238 54 27 0 chr2L 22169503 22169540 -842004 - PROTOP_A DNA P -559 546 509 1 754 254 29 29 0 chr2L 22169508 22169543 -842001 + PROTOP_A DNA P 507 542 -563 1 754 38 39 0 0 chr2L 22170187 22170239 -841305 + AT_rich Low_complexity Low_complexity 1 52 0 1 754 646 26 0 0 chr2L 22171260 22171338 -840206 + DMCR1A LINE CR1 3564 3641 -829 1 754 8037 33 3 0 chr2L 22171336 22172337 -839207 + DMCR1A LINE CR1 2361 3364 -1106 1 754 3848 25 15 0 chr2L 22172350 22172831 -838713 + DMCR1A LINE CR1 3983 4470 0 1 754 1206 134 102 44 chr2L 22172943 22173259 -838285 - Invader1_LTR LTR Gypsy -17 406 1 1 754 816 139 52 17 chr2L 22173388 22173628 -837916 + DNAREP1_DM LINE Penelope 120 315 -279 1 754 48 18 0 0 chr2L 22173672 22173727 -837817 + AT_rich Low_complexity Low_complexity 1 55 0 1 754 558 230 67 7 chr2L 22174053 22174202 -837342 + Gypsy_I LTR Gypsy 1223 1380 -5127 1 754 784 192 62 49 chr2L 22174346 22174571 -836973 + Gypsy8_I LTR Gypsy 1250 1477 -2870 1 754 905 222 5 5 chr2L 22174604 22174817 -836727 + Gypsy8_I LTR Gypsy 1598 1810 -2537 1 754 342 221 160 0 chr2L 22175995 22176126 -835418 + DNAREP1_DM LINE Penelope 25 176 -418 1 754 791 151 329 16 chr2L 22176177 22176497 -835047 + DNAREP1_DM LINE Penelope 175 594 0 1 754 428 191 70 0 chr2L 22176504 22176619 -834925 + DMCR1A LINE CR1 550 672 -3798 1 754 1547 73 0 0 chr2L 22176728 22176962 -834582 + Jockey2 LINE Jockey 3183 3416 -12 1 754 328 284 0 10 chr2L 22176987 22177090 -834454 + DMCR1A LINE CR1 1809 1910 -2560 1 754 229 122 318 35 chr2L 22177134 22177219 -834325 + DNAREP1_DM LINE Penelope 225 333 -261 1 754 395 254 117 12 chr2L 22177247 22177418 -834126 + DNAREP1_DM LINE Penelope 401 589 -5 1 754 454 242 73 13 chr2L 22177491 22177642 -833902 + DMCR1A LINE CR1 3001 3160 -1310 1 754 1066 89 77 16 chr2L 22177642 22177824 -833720 - DNAREP1_DM LINE Penelope -401 193 1 1 754 650 180 45 62 chr2L 22177847 22178025 -833519 - NINJA_LTR LTR Pao -19 298 124 1 754 1130 135 66 41 chr2L 22178752 22179023 -832521 - DNAREP1_DM LINE Penelope -230 364 87 1 754 629 131 0 0 chr2L 22179046 22179153 -832391 - DNAREP1_DM LINE Penelope -486 108 2 1 754 496 140 43 0 chr2L 22179183 22179276 -832268 - DNAREP1_DM LINE Penelope 0 594 498 1 754 56 16 0 0 chr2L 22180284 22180347 -831197 + AT_rich Low_complexity Low_complexity 1 63 0 1 754 1394 73 294 9 chr2L 22180592 22181017 -830527 + R1_DM LINE R1 4807 5352 -4 1 754 1235 113 5 0 chr2L 22182156 22182360 -829184 + IDEFIX_LTR LTR Gypsy 1 205 -389 1 754 1634 92 36 18 chr2L 22182370 22182648 -828896 + IDEFIX_LTR LTR Gypsy 312 594 0 1 754 1114 318 14 29 chr2L 22184144 22184769 -826775 + BLASTOPIA_I LTR Gypsy 2588 3203 -1278 1 754 582 345 44 38 chr2L 22185112 22185952 -825592 + BLASTOPIA_I LTR Gypsy 3629 4473 -8 1 754 38 51 0 0 chr2L 22186050 22186109 -825435 + AT_rich Low_complexity Low_complexity 1 59 0 1 754 4203 231 41 6 chr2L 22186109 22187291 -824253 - Transib5 DNA Transib -444 2557 1335 1 754 673 247 76 72 chr2L 22187309 22187470 -824074 - Transib5 DNA Transib -2418 583 422 1 754 501 104 0 0 chr2L 22187470 22187547 -823997 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 754 673 247 76 72 chr2L 22187547 22187966 -823578 - Transib5 DNA Transib -2580 421 1 1 754 462 60 119 0 chr2L 22187966 22188033 -823511 - BS3_DM LINE Jockey -883 907 833 1 754 1262 104 45 0 chr2L 22188040 22188241 -823303 - BS3_DM LINE Jockey -1495 295 86 1 754 2332 263 92 12 chr2L 22188257 22189068 -822476 - BS2 LINE Jockey -1950 2771 1896 1 754 1237 116 18 9 chr2L 22190949 22191166 -820378 - DNAREP1_DM LINE Penelope -181 413 195 1 754 891 109 258 27 chr2L 22191534 22191798 -819746 - DNAREP1_DM LINE Penelope -269 325 1 1 754 1191 163 42 0 chr2L 22192902 22193141 -818403 + DNAREP1_DM LINE Penelope 1 249 -345 1 754 942 108 132 0 chr2L 22193146 22193313 -818231 + DNAREP1_DM LINE Penelope 406 594 0 1 754 31 58 0 0 chr2L 22193618 22193670 -817874 + AT_rich Low_complexity Low_complexity 1 52 0 1 754 254 261 57 65 chr2L 22193766 22193889 -817655 - DIVER2_I LTR Pao -785 3362 3241 1 754 1164 165 163 5 chr2L 22194119 22194499 -817045 + PROTOP DNA P 1411 1682 -2798 1 754 259 180 0 0 chr2L 22194564 22194614 -816930 + PROTOP DNA P 4429 4479 -1 1 754 2236 105 35 35 chr2L 22195659 22196064 -815480 + DNAREP1_DM LINE Penelope 161 565 -29 1 754 201 143 70 18 chr2L 22196922 22196979 -814565 + (CTATT)n Simple_repeat Simple_repeat 4 63 0 1 754 24 77 0 0 chr2L 22197754 22197806 -813738 + AT_rich Low_complexity Low_complexity 1 52 0 1 754 26 0 0 0 chr2L 22198245 22198271 -813273 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 3840 60 156 0 chr2L 22199988 22200623 -810921 - FB4_DM DNA Tc1 -3355 734 1 1 754 822 91 16 8 chr2L 22200857 22200979 -810565 - DMCR1A LINE CR1 0 4470 4348 1 754 1454 150 54 34 chr2L 22201104 22201400 -810144 - DMCR1A LINE CR1 -3522 948 647 1 754 2297 0 0 0 chr2L 22201407 22201683 -809861 - Copia_LTR LTR Copia 0 276 1 1 754 39252 1 0 0 chr2L 22201683 22206275 -805269 - Copia_I LTR Copia 0 4593 1 1 754 2297 0 0 0 chr2L 22206275 22206551 -804993 - Copia_LTR LTR Copia 0 276 1 1 754 1920 173 82 6 chr2L 22206594 22207093 -804451 - DMCR1A LINE CR1 -3895 575 39 1 754 2602 150 45 8 chr2L 22207161 22207666 -803878 - DMCR1A LINE CR1 -298 4172 3649 1 754 461 146 0 0 chr2L 22207683 22207765 -803779 - DMCR1A LINE CR1 -1383 3087 3006 1 754 333 85 0 0 chr2L 22207764 22207811 -803733 - DMCR1A LINE CR1 -1572 2898 2852 1 754 21 0 0 0 chr2L 22208488 22208509 -803035 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 517 121 90 10 chr2L 22209135 22209235 -802309 - DMCR1A LINE CR1 -1620 2850 2743 1 754 352 164 0 16 chr2L 22209224 22209286 -802258 - DMCR1A LINE CR1 -2779 1691 1631 1 754 397 141 77 0 chr2L 22209426 22209504 -802040 - DMCR1A LINE CR1 -1709 2761 2678 1 754 2336 136 47 7 chr2L 22209496 22209919 -801625 + DNAREP1_DM LINE Penelope 124 563 -31 1 754 39 38 0 0 chr2L 22211945 22211998 -799546 + AT_rich Low_complexity Low_complexity 1 53 0 1 754 25 31 0 0 chr2L 22212096 22212128 -799416 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 423 193 23 0 chr2L 22212449 22212537 -799007 - DNAREP1_DM LINE Penelope -3 591 502 1 754 451 147 76 128 chr2L 22214711 22214883 -796661 + DM176_LTR LTR Gypsy 134 296 -211 1 754 490 345 15 21 chr2L 22215427 22215753 -795791 + Invader1_I LTR Gypsy 1818 2141 -1045 1 754 3143 29 0 5 chr2L 22216160 22216547 -794997 - DIVER2_LTR LTR Pao 0 385 1 1 754 26 30 0 0 chr2L 22216631 22216664 -794880 + AT_rich Low_complexity Low_complexity 1 33 0 1 754 27 29 0 0 chr2L 22217709 22217743 -793801 + AT_rich Low_complexity Low_complexity 1 34 0 1 754 265 30 0 0 chr2L 22218276 22218309 -793235 + G3_DM LINE Jockey 1 33 -4572 1 754 990 64 6 71 chr2L 22218309 22218478 -793066 + DMRT1C LINE R1 662 819 -4624 1 754 3143 59 23 4 chr2L 22218473 22219232 -792312 - PROTOP DNA P -371 4109 3667 1 754 2898 20 0 0 chr2L 22219232 22219578 -791966 - Invader4_LTR LTR Gypsy 0 346 1 1 754 381 81 0 31 chr2L 22219578 22219641 -791903 - PROTOP DNA P -810 3670 3610 1 754 4901 76 101 13 chr2L 22219640 22220919 -790625 - PROTOP DNA P -3089 1391 1 1 754 9561 72 49 3 chr2L 22220919 22222351 -789193 + DMRT1C LINE R1 808 2304 -3139 1 754 8670 61 42 8 chr2L 22222353 22224478 -787066 + DMRT1C LINE R1 3179 5443 0 1 754 2350 31 86 15 chr2L 22224743 22225070 -786474 + G5_DM LINE Jockey 4507 4856 0 1 754 241 217 16 16 chr2L 22225581 22225642 -785902 + TRAM_I LTR Pao 1108 1168 -1540 1 754 1300 93 73 9 chr2L 22225918 22226136 -785408 + G3_DM LINE Jockey 103 334 -4271 1 754 1220 111 45 82 chr2L 22226764 22227009 -784535 + G3_DM LINE Jockey 344 579 -4026 1 754 411 347 35 63 chr2L 22226804 22227311 -784233 + DIVER2_I LTR Pao 1330 1822 -2325 1 754 600 353 3 0 chr2L 22228710 22229056 -782488 + DIVER2_I LTR Pao 3325 3671 -476 1 754 2799 79 54 9 chr2L 22229058 22229505 -782039 - TRANSIB4 DNA Transib 0 2610 2144 1 754 262 358 0 0 chr2L 22230218 22230429 -781115 - Invader3_I LTR Gypsy -695 4193 4059 1 754 230 281 11 11 chr2L 22231455 22231545 -779999 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 1 754 1466 78 25 21 chr2L 22234290 22234526 -777018 - TRANSIB4 DNA Transib -452 2158 1922 1 754 1425 76 25 113 chr2L 22234511 22234794 -776750 - TRANSIB4 DNA Transib -1048 1562 1305 1 754 320 321 7 7 chr2L 22236285 22236426 -775118 + Invader2_I LTR Gypsy 2624 2749 -1843 1 754 251 338 32 0 chr2L 22236716 22236870 -774674 + Invader2_I LTR Gypsy 3317 3475 -1413 1 754 314 328 16 10 chr2L 22237206 22237400 -774144 + BLASTOPIA_I LTR Gypsy 3541 3735 -746 1 754 26 0 0 0 chr2L 22237883 22237909 -773635 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 2684 68 160 0 chr2L 22237997 22238440 -773104 - TRANSIB4 DNA Transib -1585 1025 512 1 754 609 56 0 0 chr2L 22238440 22238529 -773015 - TRANSIB4 DNA Transib -2520 90 2 1 754 503 336 88 12 chr2L 22238538 22238881 -772663 + DIVER2_I LTR Pao 3675 4043 -104 1 754 869 282 97 32 chr2L 22241219 22241757 -769787 + LINEJ1_DM LINE Jockey 1037 1609 -3411 1 754 779 88 129 134 chr2L 22241891 22242144 -769400 - DNAREP1_DM LINE Penelope -219 375 1 1 754 234 232 67 57 chr2L 22245275 22245380 -766164 - Gypsy_I LTR Gypsy -4521 1986 1881 1 754 51 17 0 0 chr2L 22245514 22245572 -765972 + AT_rich Low_complexity Low_complexity 1 58 0 1 754 586 311 23 0 chr2L 22245572 22245836 -765708 + Invader1_I LTR Gypsy 1044 1313 -1873 1 754 353 143 130 11 chr2L 22246055 22246147 -765397 - R1_DM LINE R1 -338 5018 4916 1 754 411 83 0 0 chr2L 22246145 22246205 -765339 + DNAREP1_DM LINE Penelope 534 593 -1 1 754 21 0 0 0 chr2L 22246259 22246280 -765264 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 26 74 0 0 chr2L 22247987 22248041 -763503 + AT_rich Low_complexity Low_complexity 1 54 0 1 754 25 0 0 0 chr2L 22248709 22248734 -762810 + AT_rich Low_complexity Low_complexity 1 25 0 1 754 29 0 0 0 chr2L 22248899 22248928 -762616 + AT_rich Low_complexity Low_complexity 1 29 0 1 754 46 92 0 0 chr2L 22249175 22249305 -762239 + AT_rich Low_complexity Low_complexity 1 130 0 1 754 21 0 0 0 chr2L 22250866 22250887 -760657 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 1898 77 42 10 chr2L 22250952 22251241 -760303 + FB4_DM DNA Tc1 1 298 -3791 1 754 6925 46 60 22 chr2L 22251244 22252270 -759274 + PROTOP_A DNA P 41 1105 0 1 754 1345 104 141 25 chr2L 22252270 22252544 -759000 + FB4_DM DNA Tc1 3771 4076 -13 1 754 22 0 0 0 chr2L 22254104 22254126 -757418 + AT_rich Low_complexity Low_complexity 1 22 0 1 754 191 140 20 0 chr2L 22254459 22254509 -757035 + (TATAA)n Simple_repeat Simple_repeat 5 55 0 1 754 272 274 74 14 chr2L 22254584 22254732 -756812 - I_DM LINE I -3974 2257 2101 1 754 2699 112 139 30 chr2L 22255486 22256121 -755423 + PROTOP DNA P 1 707 -3773 1 754 403 123 0 0 chr2L 22256122 22256195 -755349 + PROTOP DNA P 1009 1081 -3399 1 754 506 125 138 35 chr2L 22256188 22256304 -755240 + PROTOP DNA P 3918 4045 -435 1 754 428 20 0 0 chr2L 22256301 22256352 -755192 + PROTOP DNA P 4414 4465 -15 1 754 1241 128 64 5 chr2L 22256382 22256601 -754943 + DNAREP1_DM LINE Penelope 362 593 -1 1 754 586 95 0 40 chr2L 22257284 22257383 -754161 - PROTOP DNA P -9 4471 4377 1 754 198 0 0 0 chr2L 22258669 22258691 -752853 + (T)n Simple_repeat Simple_repeat 1 22 0 1 754 17282 6 0 0 chr2L 22258691 22260733 -750811 - G6_DM LINE Jockey 0 2042 1 1 754 246 146 0 0 chr2L 22261073 22261121 -750423 - Gypsy8_I LTR Gypsy -212 4135 4088 1 754 806 129 0 64 chr2L 22261142 22261299 -750245 - Gypsy8_I LTR Gypsy -249 4098 3952 1 754 376 227 14 77 chr2L 22261340 22261483 -750061 - Gypsy8_I LTR Gypsy -805 3542 3409 1 754 385 189 21 43 chr2L 22261598 22261692 -749852 - Gypsy8_I LTR Gypsy -934 3413 3322 1 754 238 330 0 0 chr2L 22261699 22261796 -749748 + (CGG)n Simple_repeat Simple_repeat 1 97 0 1 754 1415 154 56 89 chr2L 22261800 22262192 -749352 - Gypsy8_I LTR Gypsy -1014 3333 2955 1 754 2056 111 99 8 chr2L 22262183 22262565 -748979 - Gypsy8_I LTR Gypsy -2095 2252 1836 1 754 276 292 0 0 chr2L 22262624 22262713 -748831 - OSVALDO_I LTR Gypsy -2974 3679 3591 1 754 2153 76 3 0 chr2L 22262836 22263133 -748411 - DMRT1B LINE R1 -120 5063 4766 1 754 8440 29 16 3 chr2L 22263133 22264223 -747321 - PROTOP_A DNA P 0 1105 1 1 754 3058 109 105 8 chr2L 22264223 22265071 -746473 - DMRT1B LINE R1 -411 4772 3843 1 754 1368 138 8 9 chr2L 22265062 22265369 -746175 - DMRT1B LINE R1 -3119 2064 1701 1 754 470 155 72 0 chr2L 22265363 22265460 -746084 - DMRT1B LINE R1 -3615 1568 1465 1 754 42 0 0 0 chr2L 22265476 22265518 -746026 + AT_rich Low_complexity Low_complexity 1 42 0 1 754 26 0 0 0 chr2L 22267311 22267337 -744207 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 237 159 73 73 chr2L 22267703 22267771 -743773 - Gypsy4_I LTR Gypsy -1897 4391 4324 1 754 24 53 0 0 chr2L 22268106 22268144 -743400 + AT_rich Low_complexity Low_complexity 1 38 0 1 754 634 301 32 63 chr2L 22268616 22269220 -742324 - GTWIN_I LTR Gypsy -2883 3538 3119 1 754 649 46 153 8 chr2L 22269178 22269255 -742289 - TLD2 Unknown Unknown -68 150 65 1 754 208 0 62 0 chr2L 22269255 22269287 -742257 + (TTA)n Simple_repeat Simple_repeat 1 34 0 1 754 649 46 153 8 chr2L 22269287 22269340 -742204 - TLD2 Unknown Unknown -154 64 1 1 754 440 251 161 17 chr2L 22269289 22269463 -742081 - GTWIN_I LTR Gypsy -3619 2669 2471 1 754 1354 40 0 56 chr2L 22269459 22269672 -741872 + Invader2_I LTR Gypsy 4392 4592 0 1 754 228 114 0 0 chr2L 22270061 22270096 -741448 - Invader1_I LTR Gypsy 0 3186 3152 1 754 1643 305 2 1 chr2L 22270259 22270878 -740666 - Invader6_I LTR Gypsy -922 2264 1663 1 754 2443 306 29 19 chr2L 22270893 22272124 -739420 - Invader6_I LTR Gypsy -1388 2711 1468 1 754 1054 303 9 0 chr2L 22272121 22272468 -739076 - Invader4_I LTR Gypsy -2063 350 1 1 754 1939 40 12 0 chr2L 22272802 22273050 -738494 + Invader2_LTR LTR Gypsy 16 266 0 1 754 406 330 19 27 chr2L 22274523 22274915 -736629 - Gypsy3_I LTR Gypsy -5228 1784 1218 1 754 21 0 0 0 chr2L 22275469 22275490 -736054 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 29 28 0 0 chr2L 22275820 22275856 -735688 + AT_rich Low_complexity Low_complexity 1 36 0 1 754 2173 115 0 0 chr2L 22276284 22276631 -734913 - DMRT1B LINE R1 -3719 1464 1118 1 754 3650 181 203 12 chr2L 22277139 22278015 -733529 - LINEJ1_DM LINE Jockey -226 4794 3752 1 754 935 163 199 0 chr2L 22278132 22278328 -733216 + LINEJ1_DM LINE Jockey 4139 4373 -647 1 754 370 80 0 0 chr2L 22278334 22278384 -733160 - PROTOP_A DNA P -1055 50 1 1 754 707 156 7 7 chr2L 22278508 22278650 -732894 - DNAREP1_DM LINE Penelope -271 323 182 1 94 6502 199 71 71 chr2L 22280498 22282765 -728779 - Gypsy12_LTR LTR Gypsy 0 2280 1 1 755 2553 17 0 0 chr2L 22283450 22283737 -727807 - Gypsy4_LTR LTR Gypsy 0 287 1 1 755 47483 4 0 2 chr2L 22283737 22289009 -722535 - Gypsy4_I LTR Gypsy 0 6288 1026 1 755 6875 6 20 0 chr2L 22289008 22289813 -721731 - Gypsy4_I LTR Gypsy -5467 821 1 1 755 2553 17 0 0 chr2L 22289813 22290100 -721444 - Gypsy4_LTR LTR Gypsy 0 287 1 1 755 623 330 75 11 chr2L 22290151 22290525 -721019 - G5A_DM LINE Jockey -479 2362 1965 1 755 319 247 13 0 chr2L 22290553 22290630 -720914 - G5_DM LINE Jockey -1063 3793 3716 1 755 1318 289 64 2 chr2L 22290631 22291130 -720414 - G5_DM LINE Jockey -1321 3535 3006 1 755 276 346 36 21 chr2L 22291159 22291351 -720193 - G5_DM LINE Jockey -1913 2943 2749 1 755 710 181 182 55 chr2L 22291581 22291762 -719782 - Gypsy12_I LTR Gypsy -504 5042 4839 1 755 4964 152 18 15 chr2L 22291757 22292574 -718970 - Gypsy12_I LTR Gypsy -1243 4303 3484 1 755 1068 144 256 29 chr2L 22292578 22292989 -718555 - Gypsy12A_LTR LTR Gypsy -1181 1099 596 1 755 34 55 0 0 chr2L 22294435 22294490 -717054 + AT_rich Low_complexity Low_complexity 1 55 0 1 755 26 0 0 0 chr2L 22295083 22295109 -716435 + AT_rich Low_complexity Low_complexity 1 26 0 1 755 509 170 70 0 chr2L 22295276 22295376 -716168 + DNAREP1_DM LINE Penelope 1 107 -487 1 755 612 146 0 0 chr2L 22295411 22295507 -716037 - MDG1_I LTR Gypsy -2938 3658 3563 1 755 1060 185 85 16 chr2L 22295526 22295932 -715612 - MDG1_I LTR Gypsy -3146 3450 2972 1 755 36 23 0 0 chr2L 22295932 22295975 -715569 + AT_rich Low_complexity Low_complexity 1 43 0 1 755 22 0 0 0 chr2L 22296193 22296215 -715329 + AT_rich Low_complexity Low_complexity 1 22 0 1 755 29 0 0 0 chr2L 22296942 22296971 -714573 + AT_rich Low_complexity Low_complexity 1 29 0 1 755 189 94 0 0 chr2L 22296974 22297006 -714538 + (TATAA)n Simple_repeat Simple_repeat 3 34 0 1 755 21 0 0 0 chr2L 22297006 22297027 -714517 + AT_rich Low_complexity Low_complexity 1 21 0 1 755 239 312 20 46 chr2L 22297127 22297278 -714266 + BURDOCK_I LTR Gypsy 851 997 -4863 1 755 220 179 18 18 chr2L 22297543 22297600 -713944 + (TAA)n Simple_repeat Simple_repeat 2 58 0 1 755 387 216 122 35 chr2L 22297774 22297889 -713655 - MDG1_I LTR Gypsy -4776 1820 1696 1 755 435 231 121 6 chr2L 22297884 22298041 -713503 - MDG1_I LTR Gypsy -5160 1436 1262 1 755 235 220 0 20 chr2L 22298049 22298100 -713444 - DNAREP1_DM LINE Penelope -104 490 441 1 755 369 95 467 0 chr2L 22298069 22298174 -713370 - DNAREP1_DM LINE Penelope -369 225 72 1 755 32 0 0 0 chr2L 22298339 22298371 -713173 + AT_rich Low_complexity Low_complexity 1 32 0 1 755 205 195 0 0 chr2L 22298388 22298429 -713115 + A-rich Low_complexity Low_complexity 1 41 0 1 755 3395 32 2 22 chr2L 22298506 22298920 -712624 - Baggins1 LINE LOA 0 5453 5048 1 755 284 185 110 12 chr2L 22299319 22299330 -712214 + P_DG DNA P 2738 2756 -132 1 755 634 37 49 0 chr2L 22299330 22299412 -712132 - DNAREP1_DM LINE Penelope 0 594 509 1 755 397 74 19 0 chr2L 22299426 22299480 -712064 - DNAREP1_DM LINE Penelope -150 444 390 1 755 580 115 177 0 chr2L 22299479 22299575 -711969 - HMSBEAGLE_I LTR Gypsy -5037 1492 1380 1 755 2786 60 3 0 chr2L 22299590 22299941 -711603 - Baggins1 LINE LOA -5095 358 7 1 755 773 81 48 8 chr2L 22300175 22300299 -711245 - G5_DM LINE Jockey 0 4856 4728 1 755 2005 61 11 0 chr2L 22300299 22300562 -710982 + Invader2_LTR LTR Gypsy 1 266 0 1 755 29912 35 23 2 chr2L 22300563 22304395 -707149 + Invader2_I LTR Gypsy 2 4218 -670 1 755 266 100 0 0 chr2L 22304404 22304444 -707100 + Invader2_LTR LTR Gypsy 227 266 0 1 755 1053 82 301 5 chr2L 22304444 22304643 -706901 - G5_DM LINE Jockey -125 4731 4473 1 755 25 75 0 0 chr2L 22304677 22304730 -706814 + AT_rich Low_complexity Low_complexity 1 53 0 1 755 717 105 102 25 chr2L 22304787 22304944 -706600 + TLD2 Unknown Unknown 44 212 -6 1 755 333 313 80 17 chr2L 22304993 22305331 -706213 + Gypsy7_I LTR Gypsy 2987 3095 -1889 1 755 21 57 0 0 chr2L 22305728 22305763 -705781 + AT_rich Low_complexity Low_complexity 1 35 0 1 755 29 70 0 0 chr2L 22306551 22306608 -704936 + AT_rich Low_complexity Low_complexity 1 57 0 1 755 43 20 0 0 chr2L 22307138 22307188 -704356 + AT_rich Low_complexity Low_complexity 1 50 0 1 755 587 150 44 9 chr2L 22307391 22307505 -704039 - DM297_LTR LTR Gypsy -23 391 274 1 755 708 288 25 28 chr2L 22307552 22307870 -703674 - DM297_I LTR Gypsy -470 5642 5326 1 755 8087 157 137 21 chr2L 22307869 22309819 -701725 - DM297_I LTR Gypsy -1160 4952 2827 1 755 4589 170 112 38 chr2L 22309836 22311147 -700397 - DM297_I LTR Gypsy -3879 2288 869 1 755 1769 108 152 6 chr2L 22311153 22311664 -699880 - DNAREP1_DM LINE Penelope -8 586 2 1 755 31 68 0 0 chr2L 22311779 22311838 -699706 + AT_rich Low_complexity Low_complexity 1 59 0 1 755 394 236 93 60 chr2L 22312975 22313191 -698353 - DNAREP1_DM LINE Penelope -369 225 3 1 755 654 285 105 59 chr2L 22314204 22314808 -696736 + Gypsy4_I LTR Gypsy 2268 2768 -3520 1 755 1279 90 176 40 chr2L 22314967 22315279 -696265 - DNAREP1_DM LINE Penelope -262 332 1 1 755 1744 25 0 0 chr2L 22315672 22315875 -695669 - FROGGER_LTR LTR Copia 0 203 1 1 755 18931 0 0 0 chr2L 22315875 22317952 -693592 - FROGGER_I LTR Copia 0 2077 1 1 755 1842 0 0 0 chr2L 22317952 22318155 -693389 - FROGGER_LTR LTR Copia 0 203 1 1 755 2480 103 75 35 chr2L 22318305 22318813 -692731 + DNAREP1_DM LINE Penelope 1 594 0 1 755 21 0 0 0 chr2L 22318968 22318989 -692555 + AT_rich Low_complexity Low_complexity 1 21 0 1 755 507 190 50 0 chr2L 22321109 22321230 -690314 - I_DM LINE I -2299 3932 3806 1 755 2457 190 68 5 chr2L 22321247 22321803 -689741 - I_DM LINE I -2486 3745 3155 1 755 921 174 73 42 chr2L 22321885 22322278 -689266 - DNAREP1_DM LINE Penelope -272 322 86 1 755 2542 75 32 20 chr2L 22322856 22323272 -688272 + Gypsy6A_LTR LTR Gypsy 1 420 0 1 755 2687 136 44 18 chr2L 22323882 22324377 -687167 - DMCR1A LINE CR1 -669 3801 3294 1 755 597 121 0 0 chr2L 22324405 22324496 -687048 - DNAREP1_DM LINE Penelope -4 590 500 1 755 1091 70 70 0 chr2L 22324497 22324654 -686890 - Mariner2_DM DNA Tc1 0 912 745 1 755 2260 55 265 0 chr2L 22324655 22325031 -686513 - TRANSIB2 DNA Transib -2233 611 136 1 755 728 52 31 0 chr2L 22325035 22325131 -686413 - Mariner2_DM DNA Tc1 -777 135 37 1 755 2194 129 213 13 chr2L 22325984 22326440 -685104 - DNAREP1_DM LINE Penelope 0 594 48 1 755 526 157 8 77 chr2L 22326996 22327113 -684431 - DMCR1A LINE CR1 -190 4280 4172 1 755 460 136 0 93 chr2L 22327584 22327681 -683863 + DMCR1A LINE CR1 4178 4265 -205 1 755 1768 110 100 3 chr2L 22327685 22327986 -683558 - DMCR1A LINE CR1 -292 4178 3849 1 755 283 206 0 0 chr2L 22328043 22328106 -683438 - DMCR1A LINE CR1 -766 3704 3642 1 755 1330 119 198 42 chr2L 22328110 22328464 -683080 - Invader1_LTR LTR Gypsy -6 417 9 1 755 276 304 129 12 chr2L 22329128 22329288 -682256 + Invader5_I LTR Gypsy 1406 1584 -2892 1 755 2296 15 0 22 chr2L 22329288 22329560 -681984 - Invader2_LTR LTR Gypsy 0 266 1 1 755 36677 12 26 7 chr2L 22329560 22334068 -677476 - Invader2_I LTR Gypsy 0 4592 2 1 755 2263 30 8 0 chr2L 22334069 22334333 -677211 - Invader2_LTR LTR Gypsy 0 266 1 1 755 4916 127 49 10 chr2L 22334334 22335159 -676385 + Invader5_I LTR Gypsy 941 2438 -2038 1 755 2352 189 147 43 chr2L 22335165 22335977 -675567 + Invader5_I LTR Gypsy 1417 2235 -951 1 755 266 122 398 48 chr2L 22335990 22336093 -675451 + Invader5_I LTR Gypsy 2801 2939 -395 1 755 365 161 0 0 chr2L 22336100 22336162 -675382 + Invader5_I LTR Gypsy 3273 3334 0 1 755 1422 60 0 37 chr2L 22336161 22336352 -675192 + Invader5_LTR LTR Gypsy 1 184 -168 1 755 2888 61 115 0 chr2L 22336352 22336794 -674750 - TRANSIB3 DNA Transib 0 2883 2391 1 755 4671 52 92 16 chr2L 22336792 22337730 -673814 - TRANSIB3 DNA Transib -1874 1009 1 1 755 982 101 63 0 chr2L 22337730 22337888 -673656 + Invader5_LTR LTR Gypsy 180 347 -5 1 755 630 213 58 11 chr2L 22338005 22338195 -673349 + DNAREP1_DM LINE Penelope 51 249 -345 1 755 873 122 0 58 chr2L 22338201 22338357 -673187 + DNAREP1_DM LINE Penelope 19 165 -429 1 755 381 121 121 0 chr2L 22338324 22338390 -673154 + DNAREP1_DM LINE Penelope 291 364 -230 1 755 9787 18 0 1 chr2L 22338410 22339516 -672028 - PROTOP_A DNA P 0 1105 1 1 755 549 155 133 33 chr2L 22339516 22339622 -671922 + DNAREP1_DM LINE Penelope 408 525 -69 1 755 282 189 0 0 chr2L 22339732 22339785 -671759 - G2_DM LINE Jockey -659 2443 2391 1 755 251 308 0 0 chr2L 22341321 22341386 -670158 + DIVER2_I LTR Pao 4063 4127 -20 1 755 294 319 21 0 chr2L 22341391 22341485 -670059 - G_DM LINE Jockey -2473 1873 1778 1 755 357 235 0 0 chr2L 22341505 22341590 -669954 - G_DM LINE Jockey -2718 1628 1544 1 755 995 242 35 10 chr2L 22341844 22342159 -669385 - G_DM LINE Jockey -860 1182 840 1 755 1736 24 0 0 chr2L 22342754 22342967 -668577 + G4_DM LINE Jockey 3496 3708 -148 1 755 1223 35 44 61 chr2L 22342973 22343153 -668391 + DOC3_DM LINE Jockey 1 177 -4563 1 755 233 286 116 22 chr2L 22344548 22344773 -666771 - M4DM DNA Transib -294 1141 896 1 755 22 56 0 0 chr2L 22345603 22345639 -665905 + AT_rich Low_complexity Low_complexity 1 36 0 1 755 817 192 16 32 chr2L 22345774 22345962 -665582 + DNAREP1_DM LINE Penelope 3 187 -407 1 755 230 136 0 33 chr2L 22345981 22346042 -665502 - DMCR1A LINE CR1 -106 4364 4306 1 755 365 111 0 0 chr2L 22346052 22346106 -665438 - DMCR1A LINE CR1 -315 4155 4102 1 755 24 0 0 0 chr2L 22346111 22346135 -665409 + AT_rich Low_complexity Low_complexity 1 24 0 1 755 2032 112 145 0 chr2L 22346135 22346681 -664863 - DMCR1A LINE CR1 -699 3771 3146 1 755 11636 66 40 0 chr2L 22346692 22348185 -663359 + BS2 LINE Jockey 3169 4721 0 1 755 273 89 0 0 chr2L 22348186 22348231 -663313 + (A)n Simple_repeat Simple_repeat 1 45 0 1 755 5220 112 79 63 chr2L 22348957 22350044 -661500 - PROTOP_A DNA P 0 1105 1 1 755 1541 251 56 59 chr2L 22351107 22351663 -659881 - Gypsy8_I LTR Gypsy -2064 2283 1730 1 755 26 0 0 0 chr2L 22351852 22351878 -659666 + AT_rich Low_complexity Low_complexity 1 26 0 1 755 329 281 55 30 chr2L 22352017 22352182 -659362 - FW3_DM LINE Jockey -653 2479 2311 1 755 1041 181 40 33 chr2L 22352199 22352564 -658980 - DNAREP1_DM LINE Penelope -234 360 87 1 755 228 250 56 56 chr2L 22352633 22352722 -658822 - TART_B1 LINE telomeric -7227 3427 3339 1 755 289 259 115 49 chr2L 22352971 22353093 -658451 - FW2_DM LINE Jockey -3077 884 755 1 755 703 184 61 41 chr2L 22353280 22353427 -658117 + DMCR1A LINE CR1 790 939 -3531 1 755 767 174 58 6 chr2L 22353424 22353580 -657964 + DMCR1A LINE CR1 3023 3186 -1284 1 755 802 191 32 0 chr2L 22353586 22353743 -657801 + DMCR1A LINE CR1 3607 3768 -702 1 755 605 121 20 0 chr2L 22353753 22353852 -657692 + DMCR1A LINE CR1 4332 4432 -38 1 755 525 58 14 0 chr2L 22355184 22355253 -656291 + BARI1 DNA Tc1 38 107 -1643 1 755 523 81 0 26 chr2L 22355185 22355261 -656283 - BARI1 DNA Tc1 -65 1685 1612 1 755 3970 89 88 13 chr2L 22355273 22355909 -655635 - BARI1 DNA Tc1 -1064 686 3 1 755 1372 207 137 49 chr2L 22355882 22356416 -655128 + IDEFIX_LTR LTR Gypsy 4 584 -10 1 755 22 0 0 0 chr2L 22356567 22356589 -654955 + AT_rich Low_complexity Low_complexity 1 22 0 1 755 21 0 0 0 chr2L 22356657 22356678 -654866 + AT_rich Low_complexity Low_complexity 1 21 0 1 755 3043 63 28 38 chr2L 22357802 22358229 -653315 - DMCR1A LINE CR1 -200 4270 3848 1 755 3756 44 87 28 chr2L 22358222 22358897 -652647 - DMCR1A LINE CR1 -1484 2986 2233 1 755 1231 50 44 0 chr2L 22358878 22359037 -652507 - DMCR1A LINE CR1 -2709 1761 1596 1 755 2461 55 0 25 chr2L 22359042 22359358 -652186 - DMCR1A LINE CR1 -3011 1459 1152 1 755 4340 27 42 4 chr2L 22359336 22359855 -651689 - DMCR1A LINE CR1 -3427 1043 505 1 755 529 194 0 0 chr2L 22359846 22359939 -651605 - FW2_DM LINE Jockey -2252 1709 1617 1 755 234 100 0 194 chr2L 22360014 22360076 -651468 - G3_DM LINE Jockey -2723 1882 1833 1 755 517 296 46 26 chr2L 22360045 22360239 -651305 - FW2_DM LINE Jockey -2663 1298 1101 1 755 378 222 372 42 chr2L 22360438 22360653 -650891 - FW_DM LINE Jockey -3657 1035 973 1 755 599 93 248 9 chr2L 22360653 22360762 -650782 - PROTOP_B DNA P 0 1153 1019 1 755 3206 118 86 21 chr2L 22360743 22361351 -650193 - PROTOP_B DNA P -506 647 1 1 755 22 0 0 0 chr2L 22362040 22362062 -649482 + AT_rich Low_complexity Low_complexity 1 22 0 1 755 564 133 373 0 chr2L 22362463 22362621 -648923 - DMCR1A LINE CR1 -1699 2771 2555 1 755 1241 205 27 20 chr2L 22362642 22362940 -648604 - DMCR1A LINE CR1 -1985 2485 2186 1 755 410 174 105 0 chr2L 22362939 22363025 -648519 - DMCR1A LINE CR1 -2240 2230 2136 1 755 734 204 0 14 chr2L 22363038 22363182 -648362 - DMCR1A LINE CR1 -2531 1939 1798 1 755 21 57 0 0 chr2L 22363374 22363409 -648135 + AT_rich Low_complexity Low_complexity 1 35 0 1 755 208 197 28 14 chr2L 22364794 22364822 -646722 + (TTATA)n Simple_repeat Simple_repeat 5 31 0 1 755 680 3 118 0 chr2L 22364822 22365110 -646434 + (TTA)n Simple_repeat Simple_repeat 1 322 0 1 755 208 197 28 14 chr2L 22365110 22365152 -646392 + (TTATA)n Simple_repeat Simple_repeat 1 44 0 1 755 32 0 0 0 chr2L 22368196 22368228 -643316 + AT_rich Low_complexity Low_complexity 1 32 0 1 755 26 74 0 0 chr2L 22368591 22368645 -642899 + AT_rich Low_complexity Low_complexity 1 54 0 1 755 21 36 0 0 chr2L 22368818 22368846 -642698 + AT_rich Low_complexity Low_complexity 1 28 0 1 755 28 61 0 0 chr2L 22369086 22369135 -642409 + AT_rich Low_complexity Low_complexity 1 49 0 1 755 234 0 0 0 chr2L 22369191 22369217 -642327 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 755 2653 100 64 18 chr2L 22369375 22370026 -641518 - DNAREP1_DM LINE Penelope -37 557 1 1 755 621 153 0 143 chr2L 22370225 22370400 -641144 - HMSBEAGLE_I LTR Gypsy -161 6368 6219 1 755 1568 123 174 90 chr2L 22370431 22370798 -640746 - HMSBEAGLE_I LTR Gypsy -467 6062 5665 1 755 5480 50 72 0 chr2L 22370797 22371502 -640042 - DMRT1B LINE R1 0 5183 4428 1 755 7596 30 5 0 chr2L 22371500 22372388 -639156 - DMRT1B LINE R1 -2494 2689 1798 1 755 11583 43 58 12 chr2L 22372387 22373854 -637690 - DMRT1B LINE R1 -3504 1679 143 1 755 180 0 0 0 chr2L 22373854 22373874 -637670 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 755 11583 55 53 11 chr2L 22373874 22373919 -637625 - DMRT1B LINE R1 -5041 142 102 1 755 4529 86 7 5 chr2L 22374151 22374767 -636777 - HMSBEAGLE_I LTR Gypsy -849 5680 5064 1 755 6184 100 81 29 chr2L 22374792 22376365 -635179 - HMSBEAGLE_I LTR Gypsy -2757 3772 2118 1 755 1404 105 28 19 chr2L 22376390 22376604 -634940 - HMSBEAGLE_I LTR Gypsy -4555 1974 1759 1 755 1186 83 94 6 chr2L 22376850 22377031 -634513 - DIVER2_I LTR Pao -3708 439 243 1 755 16836 14 8 0 chr2L 22377037 22378928 -632616 + FW_DM LINE Jockey 1 1907 -2785 1 755 21467 14 2 0 chr2L 22378924 22381331 -630213 + FW_DM LINE Jockey 2282 4692 0 1 755 1639 28 171 0 chr2L 22381334 22381551 -629993 - DIVER2_I LTR Pao -3893 254 1 1 755 1908 28 0 9 chr2L 22381551 22381771 -629773 - DIVER2_LTR LTR Pao 0 385 168 1 755 3542 35 23 2 chr2L 22381768 22382199 -629345 - DIVER2_I LTR Pao -15 4132 3693 1 755 5032 30 74 0 chr2L 22382198 22382803 -628741 - DIVER2_I LTR Pao -656 3491 2842 1 755 5534 27 3 0 chr2L 22382799 22383431 -628113 - DIVER2_I LTR Pao -3080 1067 434 1 755 2839 47 140 3 chr2L 22383669 22384055 -627489 - DIVER2_I LTR Pao -3708 439 1 1 755 586 15 0 0 chr2L 22384055 22384123 -627421 - DIVER2_LTR LTR Pao 0 385 318 1 755 21071 15 2 0 chr2L 22384129 22386501 -625043 + FW_DM LINE Jockey 2318 4692 0 1 755 1639 28 171 0 chr2L 22386504 22386721 -624823 - DIVER2_I LTR Pao -3893 254 1 1 755 1908 28 0 9 chr2L 22386721 22386941 -624603 - DIVER2_LTR LTR Pao 0 385 168 1 755 3542 35 23 2 chr2L 22386938 22387369 -624175 - DIVER2_I LTR Pao -15 4132 3693 1 755 5032 26 76 0 chr2L 22387368 22387972 -623572 - DIVER2_I LTR Pao -656 3491 2842 1 755 5534 27 3 0 chr2L 22387968 22388600 -622944 - DIVER2_I LTR Pao -3080 1067 434 1 755 3064 47 94 2 chr2L 22388838 22389240 -622304 - DIVER2_I LTR Pao -3708 439 1 1 755 3471 16 0 5 chr2L 22389240 22389627 -621917 - DIVER2_LTR LTR Pao 0 385 1 1 755 9066 42 54 1 chr2L 22389627 22390750 -620794 - DMCR1A LINE CR1 -1777 2693 1511 1 755 2480 50 65 0 chr2L 22390750 22391072 -620472 - Baggins1 LINE LOA -5109 344 2 1 755 1094 52 0 0 chr2L 22391995 22392131 -619413 - Baggins1 LINE LOA -5078 375 240 1 755 1021 176 101 14 chr2L 22392339 22392547 -618997 + DMLTR5 LTR Gypsy 41 266 0 1 755 497 112 98 6 chr2L 22392546 22392702 -618842 + HMSBEAGLE_I LTR Gypsy 1 214 -6315 1 755 23 0 0 0 chr2L 22392961 22392984 -618560 + AT_rich Low_complexity Low_complexity 1 23 0 1 755 10342 69 59 4 chr2L 22393431 22394820 -616724 - DMRT1B LINE R1 0 5183 3719 1 755 839 180 141 16 chr2L 22394817 22395009 -616535 + DMLTR5 LTR Gypsy 51 266 0 1 755 529 118 57 25 chr2L 22395008 22395181 -616363 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 1 755 920 106 32 52 chr2L 22395341 22395535 -616009 + Gypsy8_LTR LTR Gypsy 1 304 0 1 755 702 80 0 0 chr2L 22395536 22395636 -615908 + Gypsy8_I LTR Gypsy 31 130 -4217 1 755 42996 78 30 7 chr2L 22396359 22402229 -609315 - STALKER4_I LTR Gypsy -506 6024 17 1 755 1714 139 95 53 chr2L 22402282 22402640 -608904 - STALKER4_LTR LTR Gypsy -29 373 1 1 755 4116 127 14 36 chr2L 22402640 22403430 -608114 + Gypsy8_I LTR Gypsy 1208 1831 -2516 1 755 8678 75 12 34 chr2L 22403418 22404710 -606834 + Gypsy8_I LTR Gypsy 2075 3338 -1009 1 755 222 219 0 0 chr2L 22404739 22404803 -606741 + (CCG)n Simple_repeat Simple_repeat 1 64 0 1 755 2796 80 14 30 chr2L 22405135 22405571 -605973 + Gypsy8_I LTR Gypsy 3428 3856 -491 1 755 5603 32 60 0 chr2L 22405571 22406421 -605123 + PROTOP DNA P 1 766 -339 1 755 2019 86 0 35 chr2L 22406434 22406749 -604795 + Gypsy8_LTR LTR Gypsy 1 304 0 1 755 1353 62 106 32 chr2L 22406751 22406969 -604575 + Gypsy8_I LTR Gypsy 3 236 -4111 1 755 460 237 114 96 chr2L 22408088 22408368 -603176 - Invader1_LTR LTR Gypsy -55 368 84 1 755 1032 163 102 15 chr2L 22408580 22408785 -602759 + DMLTR5 LTR Gypsy 44 266 0 1 755 384 92 0 15 chr2L 22408784 22408850 -602694 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 755 418 246 118 100 chr2L 22409493 22409773 -601771 - Invader1_LTR LTR Gypsy -55 368 84 1 755 1048 158 102 15 chr2L 22409985 22410190 -601354 + DMLTR5 LTR Gypsy 44 266 0 1 755 361 66 65 16 chr2L 22410189 22410251 -601293 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 755 285 106 0 21 chr2L 22410273 22410321 -601223 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 755 418 246 118 100 chr2L 22410896 22411176 -600368 - Invader1_LTR LTR Gypsy -55 368 84 1 755 958 183 102 15 chr2L 22411385 22411590 -599954 + DMLTR5 LTR Gypsy 44 266 0 1 755 376 49 65 16 chr2L 22411589 22411651 -599893 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 755 285 106 0 21 chr2L 22411673 22411721 -599823 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 755 351 283 111 93 chr2L 22412293 22412573 -598971 - Invader1_LTR LTR Gypsy -55 368 84 1 755 1048 158 102 15 chr2L 22412785 22412990 -598554 + DMLTR5 LTR Gypsy 44 266 0 1 755 361 66 65 16 chr2L 22412989 22413051 -598493 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 755 285 106 0 21 chr2L 22413073 22413121 -598423 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 756 436 249 114 96 chr2L 22413693 22413973 -597571 - Invader1_LTR LTR Gypsy -55 368 84 1 756 990 173 102 15 chr2L 22414182 22414387 -597157 + DMLTR5 LTR Gypsy 44 266 0 1 756 376 49 65 16 chr2L 22414386 22414448 -597096 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 756 285 106 0 21 chr2L 22414470 22414518 -597026 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 756 402 257 114 96 chr2L 22415072 22415352 -596192 - Invader1_LTR LTR Gypsy -55 368 84 1 756 990 173 102 15 chr2L 22415561 22415766 -595778 + DMLTR5 LTR Gypsy 44 266 0 1 756 376 49 65 16 chr2L 22415765 22415827 -595717 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 756 40187 1 3 1 chr2L 22415855 22420241 -591303 - DOC LINE Jockey -2 4723 326 1 756 4347 323 59 45 chr2L 22420424 22424090 -587454 - Gypsy5_I LTR Gypsy -2310 4199 482 1 756 26 64 0 0 chr2L 22424376 22424423 -587121 + AT_rich Low_complexity Low_complexity 1 47 0 1 756 37 23 0 0 chr2L 22424665 22424709 -586835 + AT_rich Low_complexity Low_complexity 1 44 0 1 756 207 0 0 0 chr2L 22424859 22424882 -586662 + (T)n Simple_repeat Simple_repeat 1 23 0 1 756 944 211 178 13 chr2L 22425752 22426050 -585494 - DMCR1A LINE CR1 -2890 1580 1234 1 756 1645 138 225 23 chr2L 22426037 22426379 -585165 - DMCR1A LINE CR1 -3370 1100 690 1 756 820 191 167 0 chr2L 22426371 22426653 -584891 - DMCR1A LINE CR1 -4068 402 74 1 756 1278 137 195 7 chr2L 22426835 22427107 -584437 + DNAREP1_DM LINE Penelope 55 377 -217 1 756 411 123 15 0 chr2L 22429872 22429937 -581607 - DNAREP1_DM LINE Penelope -29 565 500 1 756 1237 118 72 30 chr2L 22433665 22433901 -577643 - DNAREP1_DM LINE Penelope -348 246 1 1 756 30 0 0 0 chr2L 22433974 22434004 -577540 + AT_rich Low_complexity Low_complexity 1 30 0 1 756 515 91 0 49 chr2L 22434324 22434405 -577139 + PROTOP_B DNA P 1077 1153 0 1 756 560 179 134 0 chr2L 22434510 22434622 -576922 + LINEJ1_DM LINE Jockey 3744 3870 -1150 1 756 6358 103 72 46 chr2L 22434718 22435849 -575695 + TRANSIB4 DNA Transib 772 1931 -679 1 756 2799 36 125 16 chr2L 22435845 22436280 -575264 + TRANSIB4 DNA Transib 2128 2610 0 1 756 21 0 0 0 chr2L 22436555 22436576 -574968 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 335 173 35 58 chr2L 22436912 22436998 -574546 + LINEJ1_DM LINE Jockey 4717 4800 -220 1 756 24 32 0 0 chr2L 22437238 22437269 -574275 + AT_rich Low_complexity Low_complexity 1 31 0 1 756 21 0 0 0 chr2L 22438508 22438529 -573015 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 639 166 138 52 chr2L 22439948 22440158 -571386 + DNAREP1_DM LINE Penelope 87 314 -280 1 756 280 71 0 106 chr2L 22440156 22440203 -571341 + DNAREP1_DM LINE Penelope 553 594 0 1 756 21 0 0 0 chr2L 22441138 22441159 -570385 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 6066 65 16 39 chr2L 22441698 22442863 -568681 - PROTOP_A DNA P 0 1153 1 1 756 21 0 0 0 chr2L 22444355 22444376 -567168 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 2468 77 172 5 chr2L 22444542 22444972 -566572 + PROTOP DNA P 1 502 -3978 1 756 2917 42 0 11 chr2L 22444975 22445355 -566189 + PROTOP DNA P 3008 3383 -1097 1 756 683 59 0 0 chr2L 22445351 22445453 -566091 + PROTOP DNA P 3530 3631 -849 1 756 432 125 25 74 chr2L 22445451 22445572 -565972 + PROTOP_A DNA P 740 854 -251 1 756 607 105 358 5 chr2L 22445583 22445776 -565768 - DNAREP1_DM LINE Penelope -301 293 33 1 756 263 94 44 59 chr2L 22445766 22445834 -565710 - DNAREP1_DM LINE Penelope -329 265 199 1 756 701 139 21 14 chr2L 22445834 22446041 -565503 - DNAREP1_DM LINE Penelope -262 332 128 1 756 29509 16 17 2 chr2L 22446793 22450388 -561156 + DOC2_DM LINE Jockey 1145 4793 0 1 756 686 121 26 33 chr2L 22451562 22451783 -559761 - DNAREP1_DM LINE Penelope -262 332 118 1 756 239 77 0 0 chr2L 22451783 22451822 -559722 - DMCR1A LINE CR1 -3 4467 4429 1 756 1897 185 99 141 chr2L 22451824 22452694 -558850 - DMCR1A LINE CR1 -178 4292 3460 1 756 2017 174 168 0 chr2L 22452717 22453182 -558362 - DMCR1A LINE CR1 -2289 2181 1639 1 756 285 143 0 18 chr2L 22453188 22453245 -558299 + Gypsy8_LTR LTR Gypsy 1 56 -248 1 756 734 188 203 13 chr2L 22453516 22453748 -557796 - DMCR1A LINE CR1 -2950 1520 1245 1 756 1074 114 263 27 chr2L 22453745 22454007 -557537 - DMCR1A LINE CR1 -3370 1100 777 1 756 726 147 8 0 chr2L 22454008 22454137 -557407 + DMRT1C LINE R1 4518 4647 -796 1 756 1901 145 131 13 chr2L 22454153 22454704 -556840 + DMRT1C LINE R1 4758 5373 -70 1 756 740 202 165 4 chr2L 22455184 22455434 -556110 - DM297_I LTR Gypsy -5278 889 600 1 756 1913 150 66 102 chr2L 22455857 22456384 -555160 + DNAREP1_DM LINE Penelope 87 594 0 1 756 705 142 0 8 chr2L 22456958 22457086 -554458 - Gypsy12A_LTR LTR Gypsy -1 2279 2153 1 756 1145 120 0 5 chr2L 22457081 22457273 -554271 - Gypsy12A_LTR LTR Gypsy -83 2197 2007 1 756 5362 55 39 14 chr2L 22457280 22458267 -553277 - PROTOP_B DNA P -186 967 1 1 756 328 231 68 59 chr2L 22458267 22458617 -552927 - Gypsy12A_LTR LTR Gypsy -300 2036 1618 1 756 1255 108 55 21 chr2L 22458941 22459303 -552241 - DNAREP1_DM LINE Penelope -47 547 5 1 756 23 0 0 0 chr2L 22459305 22459328 -552216 + AT_rich Low_complexity Low_complexity 1 23 0 1 756 3691 175 110 80 chr2L 22459423 22460878 -550666 - DOC5_DM LINE Jockey -18 4664 3167 1 756 1567 65 0 17 chr2L 22460877 22461110 -550434 - DOC5_DM LINE Jockey -1641 3041 2813 1 756 21 36 0 0 chr2L 22461381 22461409 -550135 + AT_rich Low_complexity Low_complexity 1 28 0 1 756 786 105 263 0 chr2L 22462077 22462229 -549315 - DNAREP1_DM LINE Penelope -2 592 401 1 756 895 112 59 0 chr2L 22462420 22462572 -548972 + DNAREP1_DM LINE Penelope 1 161 -433 1 756 1967 74 97 3 chr2L 22462680 22462979 -548565 - Mariner2_DM DNA Tc1 -585 327 1 1 756 21 0 0 0 chr2L 22463273 22463294 -548250 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 1996 144 118 25 chr2L 22464534 22464998 -546546 - DNAREP1_DM LINE Penelope 0 594 117 1 756 3493 179 86 11 chr2L 22465544 22466869 -544675 + DM297_I LTR Gypsy 3159 4674 -1493 1 756 327 297 8 17 chr2L 22467716 22467836 -543708 - DIVER2_I LTR Pao -3150 997 879 1 756 976 121 383 0 chr2L 22468014 22468231 -543313 + DNAREP1_DM LINE Penelope 10 309 -285 1 756 573 69 255 0 chr2L 22468234 22468336 -543208 + DNAREP1_DM LINE Penelope 446 573 -21 1 756 23 0 0 0 chr2L 22468392 22468415 -543129 + AT_rich Low_complexity Low_complexity 1 23 0 1 756 283 167 61 0 chr2L 22469727 22469793 -541751 + NINJA_LTR LTR Pao 229 298 -19 1 756 1936 108 114 55 chr2L 22470148 22470587 -540957 - DNAREP1_DM LINE Penelope 0 594 130 1 756 22 80 0 0 chr2L 22471621 22471671 -539873 + AT_rich Low_complexity Low_complexity 1 50 0 1 756 288 111 0 0 chr2L 22472312 22472357 -539187 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1 756 11616 92 3 2 chr2L 22474755 22476489 -535055 + S_DM DNA Tc1 1 1736 0 1 756 24 77 0 0 chr2L 22476782 22476834 -534710 + AT_rich Low_complexity Low_complexity 1 52 0 1 756 6776 86 34 45 chr2L 22479389 22480555 -530989 + PROTOP_B DNA P 1 1153 0 1 756 1485 112 8 12 chr2L 22480555 22480793 -530751 + Gypsy12A_LTR LTR Gypsy 1961 2197 -83 1 756 705 142 0 8 chr2L 22480788 22480916 -530628 + Gypsy12A_LTR LTR Gypsy 2153 2279 -1 1 756 2415 141 82 30 chr2L 22481490 22482085 -529459 - DNAREP1_DM LINE Penelope 0 594 87 1 756 742 202 165 4 chr2L 22482484 22482734 -528810 + DM297_I LTR Gypsy 600 889 -5278 1 756 3197 117 186 13 chr2L 22483210 22484535 -527009 - DMRT1C LINE R1 -66 5377 3822 1 756 276 309 18 18 chr2L 22485231 22485399 -526145 - DIVER_I LTR Pao -78 5565 5398 1 756 379 311 0 0 chr2L 22485806 22485954 -525590 - DIVER_I LTR Pao -807 4836 4689 1 756 2675 54 73 0 chr2L 22486419 22486788 -524756 - Baggins1 LINE LOA -16 5437 5042 1 756 4160 39 71 0 chr2L 22486781 22487841 -523703 - Baggins1 LINE LOA -938 4515 3381 1 756 2976 50 0 0 chr2L 22487847 22488229 -523315 - Baggins1 LINE LOA -3237 2216 1835 1 756 379 311 0 0 chr2L 22488422 22488570 -522974 - DIVER_I LTR Pao -807 4836 4689 1 756 10585 42 68 1 chr2L 22489035 22490961 -520583 - Baggins1 LINE LOA -16 5437 3381 1 756 6647 56 5 0 chr2L 22490967 22491837 -519707 - Baggins1 LINE LOA -3237 2216 1343 1 756 6740 51 149 1 chr2L 22491834 22492836 -518708 - Baggins1 LINE LOA -4303 1150 1 1 756 289 333 87 13 chr2L 22493576 22493807 -517737 - DIVER_I LTR Pao -2844 2799 2552 1 756 22 35 0 0 chr2L 22494261 22494290 -517254 + AT_rich Low_complexity Low_complexity 1 29 0 1 756 277 233 139 16 chr2L 22494365 22494487 -517057 + Gypsy8_LTR LTR Gypsy 1 137 -167 1 756 1766 65 94 30 chr2L 22494487 22494786 -516758 - M4DM DNA Transib 0 1435 1118 1 756 611 123 16 151 chr2L 22494796 22494988 -516556 + Gypsy8_LTR LTR Gypsy 134 299 -5 1 756 240 231 13 0 chr2L 22494991 22495069 -516475 + Gypsy8_I LTR Gypsy 1 79 -4268 1 756 26 0 0 0 chr2L 22496310 22496336 -515208 + AT_rich Low_complexity Low_complexity 1 26 0 1 756 392 303 127 42 chr2L 22496848 22497392 -514152 - G5_DM LINE Jockey -837 4019 3430 1 756 3729 5 0 0 chr2L 22498397 22498825 -512719 - ROO_LTR LTR Pao 0 428 1 1 756 9860 3 14 0 chr2L 22498825 22500000 -511544 - ROO_I LTR Pao 0 8256 7066 1 756 64009 1 1 0 chr2L 22500000 22507055 -504489 - ROO_I LTR Pao -1191 7065 1 1 756 3994 2 0 0 chr2L 22507055 22507483 -504061 - ROO_LTR LTR Pao 0 428 1 1 756 1218 126 6 0 chr2L 22507848 22508030 -503514 + DMRT1C LINE R1 475 657 -4786 1 756 19809 33 24 1 chr2L 22508028 22508106 -503438 + DMRT1B LINE R1 65 141 -5042 1 756 180 0 0 0 chr2L 22508106 22508126 -503418 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 756 19809 35 48 1 chr2L 22508126 22511085 -500459 + DMRT1B LINE R1 142 3242 -1941 1 756 22 35 0 0 chr2L 22511582 22511611 -499933 + AT_rich Low_complexity Low_complexity 1 29 0 1 756 332 217 139 16 chr2L 22511686 22511808 -499736 + Gypsy8_LTR LTR Gypsy 1 137 -167 1 756 1882 62 97 30 chr2L 22511808 22512106 -499438 - M4DM DNA Transib 0 1435 1118 1 756 705 117 16 151 chr2L 22512116 22512308 -499236 + Gypsy8_LTR LTR Gypsy 134 299 -5 1 756 275 231 13 0 chr2L 22512311 22512389 -499155 + Gypsy8_I LTR Gypsy 1 79 -4268 1 756 26 0 0 0 chr2L 22513630 22513656 -497888 + AT_rich Low_complexity Low_complexity 1 26 0 1 756 588 291 126 67 chr2L 22514168 22514843 -496701 - G5_DM LINE Jockey -837 4019 3305 1 756 1218 126 6 0 chr2L 22516078 22516260 -495284 + DMRT1C LINE R1 475 657 -4786 1 756 17045 29 21 1 chr2L 22516258 22516336 -495208 + DMRT1B LINE R1 65 141 -5042 1 756 180 0 0 0 chr2L 22516336 22516356 -495188 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 756 17045 29 21 1 chr2L 22516356 22518295 -493249 + DMRT1B LINE R1 142 2121 -3062 1 756 8008 84 55 1 chr2L 22518297 22519460 -492084 + DMRT1B LINE R1 2310 3566 -1617 1 756 12080 35 4 1 chr2L 22519451 22520857 -490687 + DMRT1B LINE R1 3774 5183 0 1 756 1625 111 76 7 chr2L 22520856 22521246 -490298 + DMRT1C LINE R1 2396 2911 -2532 1 756 872 59 51 0 chr2L 22521274 22521392 -490152 + DOC4_DM LINE Jockey 273 396 -2395 1 756 3499 63 69 8 chr2L 22521391 22521869 -489675 + DOC4_DM LINE Jockey 799 1305 -1486 1 756 530 282 14 14 chr2L 22521868 22522080 -489464 + DOC3_DM LINE Jockey 3472 3683 -1057 1 756 8989 33 2 21 chr2L 22522557 22523684 -487860 - PROTOP_A DNA P 0 1105 1 1 756 1494 113 160 49 chr2L 22524225 22524658 -486886 + DNAREP1_DM LINE Penelope 1 481 -113 1 756 192 97 0 0 chr2L 22524678 22524709 -486835 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 756 23 54 0 0 chr2L 22524978 22525015 -486529 + AT_rich Low_complexity Low_complexity 1 37 0 1 756 24 0 0 0 chr2L 22525042 22525066 -486478 + AT_rich Low_complexity Low_complexity 1 24 0 1 756 1165 101 13 0 chr2L 22525620 22525779 -485765 + PROTOP_B DNA P 1 161 -992 1 756 1454 204 74 0 chr2L 22525896 22526195 -485349 - DMRT1A LINE R1 -2051 3132 2812 1 756 4517 210 67 6 chr2L 22526170 22527151 -484393 - DMRT1A LINE R1 -2660 2523 1483 1 756 769 260 26 44 chr2L 22527205 22527475 -484069 - DMRT1A LINE R1 -3845 1338 1074 1 756 344 324 29 0 chr2L 22527532 22527637 -483907 - DMRT1A LINE R1 -4322 861 754 1 756 962 246 114 73 chr2L 22527660 22528260 -483284 - DMRT1A LINE R1 -4518 665 3 1 756 227 210 0 46 chr2L 22528702 22528767 -482777 + ROO_I LTR Pao 6582 6643 -1613 1 756 569 128 227 0 chr2L 22528736 22528877 -482667 + ROO_I LTR Pao 6812 6984 -1272 1 756 227 180 0 91 chr2L 22528952 22529007 -482537 + ROO_I LTR Pao 7243 7292 -964 1 756 643 168 188 0 chr2L 22528992 22529141 -482403 - ROO_I LTR Pao -964 7292 7116 1 756 800 188 18 24 chr2L 22529268 22529432 -482112 - ROO_I LTR Pao -1953 6303 6141 1 756 506 202 232 11 chr2L 22529422 22529612 -481932 - ROO_I LTR Pao -2655 5601 5370 1 756 1003 168 46 0 chr2L 22529656 22529852 -481692 - ROO_I LTR Pao -3557 4699 4495 1 756 397 169 0 25 chr2L 22529894 22529973 -481571 + Gypsy12A_LTR LTR Gypsy 68 144 -2136 1 756 352 206 0 0 chr2L 22530044 22530057 -481487 - HETRP_DM Satellite Satellite -1034 838 781 1 756 374 44 0 0 chr2L 22530057 22530102 -481442 + Invader4_LTR LTR Gypsy 1 45 -301 1 756 11672 72 39 42 chr2L 22530102 22532477 -479067 + Invader4_I LTR Gypsy 179 2413 0 1 756 3032 29 0 0 chr2L 22532477 22532823 -478721 + Invader4_LTR LTR Gypsy 1 346 0 1 756 973 303 88 62 chr2L 22533038 22534048 -477496 + DM1731_I LTR Copia 105 1140 -2836 1 756 788 340 45 11 chr2L 22534085 22534531 -477013 + DM1731_I LTR Copia 2757 3217 -759 1 756 297 250 164 88 chr2L 22535043 22535214 -476330 + Gypsy6_LTR LTR Gypsy 1 184 -223 1 756 21 0 0 0 chr2L 22535455 22535476 -476068 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 286 246 226 0 chr2L 22535516 22535715 -475829 + DNAREP1_DM LINE Penelope 17 260 -334 1 756 21 0 0 0 chr2L 22537537 22537558 -473986 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 377 235 61 10 chr2L 22537667 22537766 -473778 - DNAREP1_DM LINE Penelope -150 444 341 1 756 1616 109 28 65 chr2L 22538381 22538705 -472839 + DM297_LTR LTR Gypsy 39 350 -64 1 756 1306 103 52 35 chr2L 22539166 22539398 -472146 - Gypsy8_I LTR Gypsy -4111 236 1 1 756 1069 148 108 31 chr2L 22539398 22539595 -471949 - Gypsy8_LTR LTR Gypsy -90 214 1 1 756 2125 60 26 40 chr2L 22539596 22539942 -471602 + DM297_I LTR Gypsy 5671 6011 -156 1 756 481 71 0 103 chr2L 22539942 22540020 -471524 + Gypsy6A_LTR LTR Gypsy 1 70 -350 1 94 15107 268 20 31 chr2L 22540111 22545932 -465612 + Gypsy2_I LTR Gypsy 862 7011 -1 1 757 1931 78 25 67 chr2L 22545935 22546250 -465294 + Gypsy6A_LTR LTR Gypsy 1 302 -118 1 757 182 91 0 29 chr2L 22546323 22546357 -465187 + (CCA)n Simple_repeat Simple_repeat 2 34 0 1 757 34 24 0 0 chr2L 22546497 22546538 -465006 + AT_rich Low_complexity Low_complexity 1 41 0 1 757 10511 258 39 15 chr2L 22546784 22550670 -460874 + Gypsy6_I LTR Gypsy 862 5095 -1917 1 757 5090 285 29 13 chr2L 22550725 22552306 -459238 + Gypsy6_I LTR Gypsy 5406 7012 0 1 757 2037 68 25 64 chr2L 22552308 22552622 -458922 + Gypsy6A_LTR LTR Gypsy 1 302 -118 1 757 940 63 98 0 chr2L 22552676 22552819 -458725 + DM297_I LTR Gypsy 6011 6167 0 1 757 553 107 0 0 chr2L 22552819 22552894 -458650 + DM297_LTR LTR Gypsy 1 75 -339 1 757 639 262 50 29 chr2L 22553026 22553305 -458239 + Gypsy12A_LTR LTR Gypsy 593 877 -1403 1 757 490 175 43 17 chr2L 22553328 22553444 -458100 + Gypsy12A_LTR LTR Gypsy 1082 1200 -1080 1 757 742 174 110 35 chr2L 22553441 22553614 -457930 + Gypsy12A_LTR LTR Gypsy 1924 2109 -171 1 757 6690 60 86 8 chr2L 22553596 22555173 -456371 - DMRT1C LINE R1 -2 5441 3741 1 757 3080 85 174 10 chr2L 22555157 22555645 -455899 - DMRT1C LINE R1 -2130 3313 2746 1 757 1165 80 167 20 chr2L 22555673 22555919 -455625 - DMRT1C LINE R1 -2810 2633 2352 1 757 249 62 0 0 chr2L 22555897 22555929 -455615 - DMRT1C LINE R1 -3276 2167 2136 1 757 22 0 0 0 chr2L 22556188 22556210 -455334 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 6822 59 2 0 chr2L 22556236 22557087 -454457 - DMCR1A LINE CR1 -115 4355 3503 1 757 1147 74 0 6 chr2L 22557082 22557246 -454298 - DMCR1A LINE CR1 -1629 2841 2679 1 757 2800 56 88 0 chr2L 22557242 22557730 -453814 - DMCR1A LINE CR1 -1900 2570 2040 1 757 1215 51 0 0 chr2L 22557738 22557894 -453650 - DMCR1A LINE CR1 -2547 1923 1768 1 757 6075 76 129 7 chr2L 22557889 22558879 -452665 - DMCR1A LINE CR1 -2910 1560 412 1 757 1730 65 114 0 chr2L 22558879 22559372 -452172 + TRANSIB3 DNA Transib 1 613 -2270 1 757 252 108 0 0 chr2L 22559371 22559408 -452136 + TRANSIB3 DNA Transib 855 891 -1992 1 757 3320 50 70 44 chr2L 22559408 22559936 -451608 + TRANSIB3 DNA Transib 2314 2855 -28 1 757 1367 99 244 19 chr2L 22559941 22560211 -451333 - DMCR1A LINE CR1 -4105 365 35 1 757 497 322 37 16 chr2L 22560685 22560928 -450616 - DIVER2_I LTR Pao -2604 1543 1296 1 757 488 265 78 48 chr2L 22560966 22561172 -450372 - DIVER2_I LTR Pao -3153 994 783 1 757 356 159 16 0 chr2L 22561928 22561991 -449553 - DIVER2_I LTR Pao -2 4145 4082 1 757 1001 142 99 38 chr2L 22562022 22562234 -449310 + DNAREP1_DM LINE Penelope 295 519 -75 1 757 189 0 0 0 chr2L 22562473 22562494 -449050 + (TAATG)n Simple_repeat Simple_repeat 1 21 0 1 757 37 23 0 0 chr2L 22562918 22562962 -448582 + AT_rich Low_complexity Low_complexity 1 44 0 1 757 4020 102 16 17 chr2L 22562972 22563662 -447882 - TC1-2_DM DNA Tc1 -3 1641 953 1 757 1385 142 222 37 chr2L 22563662 22564232 -447312 + Gypsy12A_LTR LTR Gypsy 1 675 -1605 1 757 420 68 0 0 chr2L 22564234 22564293 -447251 - BARI1 DNA Tc1 -1655 95 37 1 757 227 273 0 0 chr2L 22565164 22565230 -446314 - BS3_DM LINE Jockey -917 873 808 1 757 692 263 36 32 chr2L 22566019 22566408 -445136 + IDEFIX_I LTR Gypsy 3504 4102 -1861 1 757 360 210 55 50 chr2L 22566929 22567123 -444421 + IDEFIX_I LTR Gypsy 5104 5244 -719 1 757 21 57 0 0 chr2L 22567213 22567248 -444296 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 30 27 0 0 chr2L 22567835 22567872 -443672 + AT_rich Low_complexity Low_complexity 1 37 0 1 757 320 89 0 0 chr2L 22567892 22567937 -443607 - DNAREP1_DM LINE Penelope -106 488 444 1 757 927 190 36 66 chr2L 22567942 22568386 -443158 - DNAREP1_DM LINE Penelope -259 335 18 1 757 41 36 0 0 chr2L 22568423 22568478 -443066 + AT_rich Low_complexity Low_complexity 1 55 0 1 757 384 248 8 0 chr2L 22569230 22569347 -442197 + LOOPER1_DM DNA PiggyBac 1508 1625 -256 1 757 509 260 78 48 chr2L 22570287 22570493 -441051 + DIVER2_I LTR Pao 783 994 -3153 1 757 497 322 37 16 chr2L 22570531 22570774 -440770 + DIVER2_I LTR Pao 1296 1543 -2604 1 757 1367 99 244 19 chr2L 22571248 22571518 -440026 + DMCR1A LINE CR1 35 365 -4105 1 757 3294 51 70 44 chr2L 22571523 22572051 -439493 - TRANSIB3 DNA Transib -28 2855 2314 1 757 252 108 0 0 chr2L 22572051 22572088 -439456 - TRANSIB3 DNA Transib -1992 891 855 1 757 1744 67 120 0 chr2L 22572087 22572531 -439013 - TRANSIB3 DNA Transib -2270 613 50 1 757 40319 4 0 0 chr2L 22572593 22577286 -434258 + FW_DM LINE Jockey 1 4692 0 1 757 229 86 0 0 chr2L 22577608 22577643 -433901 + DM297_LTR LTR Gypsy 340 374 -40 1 757 269 257 17 92 chr2L 22577734 22577854 -433690 + Gypsy7_LTR LTR Gypsy 45 155 -96 1 757 1467 147 104 45 chr2L 22578932 22579289 -432255 + DNAREP1_DM LINE Penelope 217 594 0 1 757 4136 61 148 9 chr2L 22579693 22580350 -431194 - DMCR1A LINE CR1 -3310 1160 412 1 757 1429 94 5 0 chr2L 22580350 22580573 -430971 + TRANSIB3 DNA Transib 1 224 -2659 1 757 51 42 0 0 chr2L 22581472 22581544 -430000 + AT_rich Low_complexity Low_complexity 1 72 0 1 757 1929 118 77 51 chr2L 22583410 22583802 -427742 - DNAREP1_DM LINE Penelope 0 594 193 1 757 517 145 152 86 chr2L 22583824 22583975 -427569 + DNAREP1_DM LINE Penelope 367 527 -67 1 757 490 109 431 34 chr2L 22583975 22584121 -427423 + DNAREP1_DM LINE Penelope 391 594 0 1 757 897 246 78 8 chr2L 22584448 22584706 -426838 - BEL_I LTR Pao -19 5385 5110 1 757 1009 250 89 38 chr2L 22584700 22585091 -426453 - BEL_I LTR Pao -1472 3932 3522 1 757 390 298 144 45 chr2L 22585497 22585810 -425734 - BEL_I LTR Pao -2772 2632 2289 1 757 251 268 0 24 chr2L 22585851 22585935 -425609 - BEL_I LTR Pao -3780 1624 1543 1 757 381 207 11 0 chr2L 22589396 22589483 -422061 - BEL_I LTR Pao -4645 759 672 1 757 1106 176 124 36 chr2L 22589884 22590258 -421286 - DNAREP1_DM LINE Penelope -275 319 33 1 757 985 231 106 7 chr2L 22590383 22590666 -420878 + BEL_I LTR Pao 63 373 -5031 1 757 363 118 15 0 chr2L 22590668 22590736 -420808 - DNAREP1_DM LINE Penelope -266 328 260 1 757 265 287 12 25 chr2L 22590882 22591043 -420501 + Gypsy8_I LTR Gypsy 68 226 -4121 1 757 812 72 0 0 chr2L 22592195 22592306 -419238 + DNAREP1_DM LINE Penelope 1 111 -483 1 757 735 92 92 0 chr2L 22592341 22592460 -419084 + DNAREP1_DM LINE Penelope 362 491 -103 1 757 512 111 0 53 chr2L 22592499 22592594 -418950 + Invader5_LTR LTR Gypsy 143 232 -120 1 757 4842 50 93 0 chr2L 22592582 22593247 -418297 + Invader5_I LTR Gypsy 47 773 -2561 1 757 656 291 75 19 chr2L 22593630 22593991 -417553 + OSVALDO_I LTR Gypsy 1893 2273 -4380 1 757 468 198 0 19 chr2L 22594034 22594142 -417402 + DMLTR5 LTR Gypsy 161 266 0 1 757 2008 184 86 50 chr2L 22594165 22594839 -416705 + HMSBEAGLE_I LTR Gypsy 20 717 -5812 1 757 4719 128 141 22 chr2L 22594852 22595775 -415769 + HMSBEAGLE_I LTR Gypsy 985 2017 -4512 1 757 1411 136 117 97 chr2L 22595778 22596119 -415425 + HMSBEAGLE_I LTR Gypsy 2155 2502 -4027 1 757 317 197 0 0 chr2L 22596132 22596198 -415346 + HMSBEAGLE_I LTR Gypsy 2437 2502 -4027 1 757 8234 90 33 7 chr2L 22596193 22597765 -413779 + HMSBEAGLE_I LTR Gypsy 2766 4416 -2113 1 757 5899 105 46 56 chr2L 22597768 22598829 -412715 + HMSBEAGLE_I LTR Gypsy 5055 6105 -424 1 757 1058 119 123 5 chr2L 22599057 22599268 -412276 + DNAREP1_DM LINE Penelope 236 471 -123 1 757 233 234 111 49 chr2L 22599279 22599423 -412121 - MICROPIA_LTR LTR Gypsy -90 386 234 1 757 465 163 0 7 chr2L 22599715 22599853 -411691 + ROO_I LTR Pao 2811 2995 -5261 1 757 3667 136 238 0 chr2L 22600086 22600875 -410669 - DMCR1A LINE CR1 -213 4257 3281 1 757 440 207 51 17 chr2L 22600871 22600989 -410555 - DMCR1A LINE CR1 -1316 3154 3033 1 757 13739 45 85 1 chr2L 22601614 22603470 -408074 - Baggins1 LINE LOA -61 5392 3381 1 757 4851 37 5 0 chr2L 22603471 22604071 -407473 - Baggins1 LINE LOA -2752 2701 2099 1 757 380 211 46 0 chr2L 22604248 22604357 -407187 - DNAREP1_DM LINE Penelope -299 295 182 1 757 361 323 12 46 chr2L 22605210 22605450 -406094 - Gypsy10_I LTR Gypsy -381 4897 4666 1 757 678 314 26 21 chr2L 22605537 22605924 -405620 - Gypsy4_I LTR Gypsy -882 5406 5018 1 757 21 0 0 0 chr2L 22606008 22606029 -405515 + AT_rich Low_complexity Low_complexity 1 21 0 1 757 670 354 13 3 chr2L 22606198 22606580 -404964 - Gypsy10_I LTR Gypsy -1394 3884 3499 1 757 927 273 77 5 chr2L 22606588 22606963 -404581 - Gypsy4_I LTR Gypsy -2366 3922 3521 1 757 338 237 0 0 chr2L 22607012 22607103 -404441 - Gypsy4_I LTR Gypsy -2358 3502 3334 1 757 234 0 0 0 chr2L 22607283 22607309 -404235 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 757 1283 279 69 2 chr2L 22607310 22607773 -403771 - Gypsy4_I LTR Gypsy -3565 2723 2230 1 757 1962 144 83 116 chr2L 22609387 22610001 -401543 + DNAREP1_DM LINE Penelope 1 594 0 1 757 21 71 0 0 chr2L 22610022 22610064 -401480 + AT_rich Low_complexity Low_complexity 1 42 0 1 757 183 80 0 0 chr2L 22610240 22610265 -401279 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 757 23 33 0 0 chr2L 22610538 22610568 -400976 + AT_rich Low_complexity Low_complexity 1 30 0 1 757 24 67 0 0 chr2L 22611049 22611094 -400450 + AT_rich Low_complexity Low_complexity 1 45 0 1 757 618 115 119 32 chr2L 22611876 22612002 -399542 - DNAREP1_DM LINE Penelope 0 594 458 1 757 244 120 40 0 chr2L 22612415 22612465 -399079 + DOC2_DM LINE Jockey 728 779 -4014 1 757 644 142 30 7 chr2L 22612641 22612776 -398768 + FW3_DM LINE Jockey 10 147 -2985 1 757 1567 171 43 43 chr2L 22612825 22613241 -398303 + Gypsy12A_LTR LTR Gypsy 320 735 -1545 1 757 320 143 65 0 chr2L 22613239 22613316 -398228 + Gypsy12A_LTR LTR Gypsy 905 986 -1294 1 757 459 110 0 47 chr2L 22613350 22613436 -398108 + Gypsy12A_LTR LTR Gypsy 1201 1282 -998 1 757 9546 183 72 33 chr2L 22613719 22615830 -395714 + Gypsy2_I LTR Gypsy 2609 4803 -1332 1 757 332 152 0 0 chr2L 22615820 22615879 -395665 + Gypsy2_I LTR Gypsy 5097 5155 -980 1 757 1754 279 44 60 chr2L 22615883 22616563 -394981 + Gypsy2_I LTR Gypsy 5456 6124 -11 1 757 539 214 83 31 chr2L 22616566 22616759 -394785 + Gypsy2_LTR LTR Gypsy 1 203 -150 1 757 597 50 283 0 chr2L 22616902 22617001 -394543 - DNAREP1_DM LINE Penelope -162 432 306 1 757 822 185 11 16 chr2L 22617072 22617259 -394285 - DNAREP1_DM LINE Penelope -408 186 1 1 757 583 152 76 122 chr2L 22620553 22620725 -390819 + FW3_DM LINE Jockey 2540 2703 -429 1 757 380 250 0 0 chr2L 22620749 22620849 -390695 + FW_DM LINE Jockey 4286 4385 -307 1 757 24 32 0 0 chr2L 22620967 22620998 -390546 + AT_rich Low_complexity Low_complexity 1 31 0 1 757 1997 141 55 46 chr2L 22621003 22621514 -390030 + DNAREP1_DM LINE Penelope 88 562 -32 1 757 3271 68 40 0 chr2L 22621509 22621964 -389580 + R1-2_DM LINE R1 2028 2500 -716 1 757 275 94 0 36 chr2L 22622031 22622086 -389458 + R1_DM LINE R1 4962 5014 -342 1 757 341 209 87 11 chr2L 22622210 22622302 -389242 + R1_DM LINE R1 5246 5344 -12 1 757 3074 66 5 0 chr2L 22622481 22622907 -388637 - DMCR1A LINE CR1 -53 4417 3990 1 757 3088 95 133 22 chr2L 22622909 22623458 -388086 - DMCR1A LINE CR1 -1056 3414 2805 1 757 510 326 94 3 chr2L 22623652 22624015 -387529 + DIVER2_I LTR Pao 479 874 -3273 1 757 27 49 0 0 chr2L 22624022 22624063 -387481 + AT_rich Low_complexity Low_complexity 1 41 0 1 757 197 33 33 0 chr2L 22625104 22625134 -386410 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 757 14716 53 114 3 chr2L 22625292 22627971 -383573 + DMCR1A LINE CR1 1 2977 -1493 1 757 7564 75 105 3 chr2L 22627964 22629171 -382373 + DMCR1A LINE CR1 3141 4470 0 1 757 2965 19 49 5 chr2L 22631881 22632250 -379294 + DIVER2_LTR LTR Pao 1 385 0 1 757 10316 150 63 89 chr2L 22632250 22632401 -379143 + DIVER2_I LTR Pao 1 151 -3996 1 757 204 40 0 0 chr2L 22632401 22632426 -379118 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1 757 10316 150 63 89 chr2L 22632426 22635123 -376421 + DIVER2_I LTR Pao 152 2775 -1372 1 757 3317 37 0 2 chr2L 22635111 22635522 -376022 + DIVER2_I LTR Pao 3249 3658 -489 1 757 2119 44 0 0 chr2L 22635516 22635788 -375756 + DIVER2_I LTR Pao 3860 4131 -16 1 757 1136 21 43 0 chr2L 22635791 22635931 -375613 + DIVER2_LTR LTR Pao 1 146 -239 1 757 22 0 0 0 chr2L 22637711 22637733 -373811 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 2371 80 32 20 chr2L 22638118 22638534 -373010 + Gypsy6A_LTR LTR Gypsy 1 420 0 1 757 708 96 0 0 chr2L 22638698 22638802 -372742 + DNAREP1_DM LINE Penelope 3 106 -488 1 757 299 205 13 0 chr2L 22639140 22639218 -372326 - HMSBEAGLE_I LTR Gypsy -4096 2433 2355 1 757 677 311 19 35 chr2L 22639346 22639722 -371822 - HMSBEAGLE_I LTR Gypsy -4437 2092 1723 1 757 420 192 20 10 chr2L 22640554 22640654 -370890 + PROTOP DNA P 4380 4480 0 1 757 693 104 128 0 chr2L 22640654 22640777 -370767 + DNAREP1_DM LINE Penelope 448 586 -8 1 757 312 180 0 0 chr2L 22640929 22640990 -370554 + DNAREP1_DM LINE Penelope 534 594 0 1 757 46 83 0 0 chr2L 22641880 22641989 -369555 + AT_rich Low_complexity Low_complexity 1 109 0 1 757 450 197 89 70 chr2L 22644360 22644518 -367026 + DNAREP1_DM LINE Penelope 285 445 -149 1 757 22 0 0 0 chr2L 22645011 22645033 -366511 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 2057 115 71 30 chr2L 22645310 22645704 -365840 - DNAREP1_DM LINE Penelope 0 594 185 1 757 1113 156 43 115 chr2L 22645704 22646131 -365413 - DNAREP1_DM LINE Penelope -259 335 1 1 757 23 0 0 0 chr2L 22646272 22646295 -365249 + AT_rich Low_complexity Low_complexity 1 23 0 1 757 543 167 32 81 chr2L 22647084 22647208 -364336 + DNAREP1_DM LINE Penelope 342 459 -135 1 757 230 150 0 0 chr2L 22647245 22647285 -364259 + DNAREP1_DM LINE Penelope 554 593 -1 1 757 26 74 0 0 chr2L 22647323 22647377 -364167 + AT_rich Low_complexity Low_complexity 1 54 0 1 757 21 36 0 0 chr2L 22647488 22647516 -364028 + AT_rich Low_complexity Low_complexity 1 28 0 1 757 27 0 0 0 chr2L 22647706 22647733 -363811 + AT_rich Low_complexity Low_complexity 1 27 0 1 757 35 0 0 0 chr2L 22647914 22647949 -363595 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 35 24 0 0 chr2L 22648013 22648055 -363489 + AT_rich Low_complexity Low_complexity 1 42 0 1 757 418 197 22 59 chr2L 22650286 22650421 -361123 + DNAREP1_DM LINE Penelope 43 172 -422 1 757 1607 144 86 52 chr2L 22650496 22650878 -360666 + DNAREP1_DM LINE Penelope 157 551 -43 1 757 318 175 118 7 chr2L 22651263 22651403 -360141 - DNAREP1_DM LINE Penelope -258 336 166 1 757 23 0 0 0 chr2L 22651621 22651644 -359900 + AT_rich Low_complexity Low_complexity 1 23 0 1 757 1783 108 41 11 chr2L 22651652 22652189 -359355 - DNAREP1_DM LINE Penelope -3 591 1 1 757 236 53 26 0 chr2L 22652234 22652272 -359272 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 757 236 206 123 37 chr2L 22652480 22652634 -358910 + DNAREP1_DM LINE Penelope 3 297 -297 1 757 24 96 0 0 chr2L 22653872 22653945 -357599 + AT_rich Low_complexity Low_complexity 1 73 0 1 757 282 218 48 38 chr2L 22654566 22654671 -356873 + DMCR1A LINE CR1 5 110 -4360 1 757 2060 132 30 3 chr2L 22654689 22655055 -356489 - Invader1_LTR LTR Gypsy 0 423 48 1 757 2161 128 124 2 chr2L 22655100 22655537 -356007 + DMCR1A LINE CR1 212 701 -3769 1 757 5388 209 90 76 chr2L 22655538 22657788 -353756 + DMCR1A LINE CR1 954 3234 -1236 1 757 655 99 0 0 chr2L 22657785 22657876 -353668 + DMCR1A LINE CR1 3869 3959 -511 1 757 2685 16 3 0 chr2L 22657880 22658200 -353344 + MAX_LTR LTR Pao 1 321 0 1 757 68300 3 4 6 chr2L 22658200 22666133 -345411 + MAX_I LTR Pao 1 7914 0 1 757 2685 16 3 0 chr2L 22666133 22666453 -345091 + MAX_LTR LTR Pao 1 321 0 1 757 2122 154 95 5 chr2L 22666456 22666900 -344644 + DMCR1A LINE CR1 3962 4445 -25 1 757 246 0 0 0 chr2L 22667699 22667727 -343817 - DNAREP1_DM LINE Penelope -2 592 565 1 757 912 169 88 68 chr2L 22667921 22668252 -343292 - DNAREP1_DM LINE Penelope -113 481 44 1 757 418 292 83 0 chr2L 22668289 22668505 -343039 - Copia_I LTR Copia -2564 2029 1796 1 757 1974 64 45 0 chr2L 22668541 22668808 -342736 - Baggins1 LINE LOA -1629 3824 3546 1 757 481 283 37 8 chr2L 22668809 22669055 -342489 - Copia_I LTR Copia -2785 1808 1556 1 757 11616 92 3 2 chr2L 22669205 22670939 -340605 + S_DM DNA Tc1 1 1736 0 1 757 40 59 0 0 chr2L 22671912 22671980 -339564 + AT_rich Low_complexity Low_complexity 1 68 0 1 757 233 355 18 44 chr2L 22672859 22673086 -338458 + Gypsy6_I LTR Gypsy 1476 1696 -5316 1 757 21 57 0 0 chr2L 22673476 22673511 -338033 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 28 0 0 0 chr2L 22673941 22673969 -337575 + AT_rich Low_complexity Low_complexity 1 28 0 1 757 508 299 47 33 chr2L 22674160 22674461 -337083 + Gypsy4_I LTR Gypsy 2480 2784 -3504 1 757 753 134 53 0 chr2L 22674300 22674471 -337073 + TLD2 Unknown Unknown 1 180 -38 1 94 1063 330 42 56 chr2L 22674590 22675739 -335805 + MICROPIA_I LTR Gypsy 1 1133 -3343 1 758 1744 320 16 18 chr2L 22675736 22676592 -334952 + Invader6_I LTR Gypsy 1708 2562 -1537 1 758 2673 316 39 14 chr2L 22676624 22677869 -333675 + MICROPIA_I LTR Gypsy 2575 3850 -626 1 758 21 82 0 0 chr2L 22678212 22678261 -333283 + AT_rich Low_complexity Low_complexity 1 49 0 1 758 392 286 28 34 chr2L 22678760 22678937 -332607 + Gypsy4_I LTR Gypsy 3232 3407 -2881 1 758 222 127 14 27 chr2L 22678952 22679025 -332519 + (TAA)n Simple_repeat Simple_repeat 2 73 0 1 758 26 64 0 0 chr2L 22680803 22680850 -330694 + AT_rich Low_complexity Low_complexity 1 47 0 1 758 35 41 0 0 chr2L 22681362 22681411 -330133 + AT_rich Low_complexity Low_complexity 1 49 0 1 758 589 225 61 102 chr2L 22681616 22681977 -329567 - Gypsy3_I LTR Gypsy -5802 375 30 1 758 1104 188 16 49 chr2L 22682107 22682414 -329130 - Gypsy3_LTR LTR Gypsy -101 297 1 1 758 395 298 0 0 chr2L 22682531 22682655 -328889 - DIVER2_I LTR Pao -446 3701 3578 1 758 298 158 0 0 chr2L 22682657 22682714 -328830 + Gypsy8_LTR LTR Gypsy 2 58 -246 1 758 183 129 0 0 chr2L 22684311 22684342 -327202 + (C)n Simple_repeat Simple_repeat 1 31 0 1 758 887 220 201 13 chr2L 22684350 22684669 -326875 - Gypsy8_I LTR Gypsy -1313 3034 2656 1 758 1172 165 80 3 chr2L 22685785 22686074 -325470 + DMRT1B LINE R1 4122 4475 -708 1 758 2983 107 4 35 chr2L 22686072 22686558 -324986 + DMRT1B LINE R1 4710 5180 -3 1 758 1803 79 70 27 chr2L 22686608 22686906 -324638 - DNAREP1_DM LINE Penelope -110 484 174 1 758 1427 119 150 3 chr2L 22688238 22688532 -323012 - DNAREP1_DM LINE Penelope -66 528 192 1 758 5560 32 45 0 chr2L 22688574 22689826 -321718 - DMCR1A LINE CR1 0 4470 3162 1 758 452 212 318 6 chr2L 22689825 22690007 -321537 - DNAREP1_DM LINE Penelope -351 243 5 1 758 3835 82 63 2 chr2L 22691441 22692030 -319514 - DMCR1A LINE CR1 -197 4273 3649 1 758 541 45 0 0 chr2L 22692035 22692102 -319442 - DMCR1A LINE CR1 -1346 3124 3058 1 758 21 0 0 0 chr2L 22692600 22692621 -318923 + AT_rich Low_complexity Low_complexity 1 21 0 1 758 3611 5 0 19 chr2L 22693951 22694382 -317162 + Invader1_LTR LTR Gypsy 1 423 0 1 758 11139 5 14 0 chr2L 22694382 22696613 -314931 + Invader1_I LTR Gypsy 1 2263 -923 1 758 524 248 99 43 chr2L 22697686 22697989 -313555 + DNAREP1_DM LINE Penelope 3 322 -272 1 758 2466 71 69 117 chr2L 22698502 22698996 -312548 + TRANSIB2 DNA Transib 1869 2338 -506 1 758 929 40 16 0 chr2L 22698996 22699122 -312422 + TRANSIB3 DNA Transib 1 128 -2755 1 758 13720 61 40 6 chr2L 22699123 22701176 -310368 + I_DM LINE I 98 2220 -4011 1 758 721 269 50 0 chr2L 22701162 22701363 -310181 - Gypsy2_I LTR Gypsy -4075 2060 1850 1 758 2400 299 77 36 chr2L 22701378 22702908 -308636 - Gypsy2_I LTR Gypsy -3991 2186 788 1 758 726 159 141 59 chr2L 22703013 22703233 -308311 - Gypsy2_I LTR Gypsy -5566 569 332 1 758 22 0 0 0 chr2L 22703233 22703255 -308289 + AT_rich Low_complexity Low_complexity 1 22 0 1 758 1152 113 56 15 chr2L 22703406 22703603 -307941 - DMCR1A LINE CR1 -690 3780 3576 1 758 3751 137 72 0 chr2L 22703622 22704270 -307274 - DMCR1A LINE CR1 -948 3522 2828 1 758 28 61 0 0 chr2L 22704807 22704856 -306688 + AT_rich Low_complexity Low_complexity 1 49 0 1 758 422 354 17 10 chr2L 22705884 22706172 -305372 - Ulysses_I LTR Gypsy -935 5446 5157 1 758 347 236 11 11 chr2L 22707086 22707180 -304364 - BEL_I LTR Pao -19 5385 5292 1 758 359 240 0 0 chr2L 22707185 22707260 -304284 - BEL_I LTR Pao -221 5183 5109 1 758 255 287 11 11 chr2L 22707257 22707415 -304129 - BEL_I LTR Pao -1738 3666 3457 1 758 238 368 0 0 chr2L 22707414 22707558 -303986 - BEL_I LTR Pao -2054 3350 3207 1 758 985 62 304 0 chr2L 22710182 22710376 -301168 + DNAREP1_DM LINE Penelope 341 593 -1 1 758 803 116 0 8 chr2L 22710403 22710533 -301011 - PROTOP_B DNA P 0 1153 1025 1 758 242 127 73 0 chr2L 22710572 22710627 -300917 - PROTOP_B DNA P -217 936 878 1 758 1190 162 200 93 chr2L 22710704 22711229 -300315 - PROTOP_B DNA P -463 690 110 1 758 1039 190 42 17 chr2L 22711252 22711493 -300051 + Gypsy10_I LTR Gypsy 4789 5035 -243 1 758 1894 201 60 24 chr2L 22711589 22712135 -299409 - CIRCE LINE Composite -2552 3804 3239 1 758 1136 179 283 2 chr2L 22712155 22712536 -299008 - CIRCE LINE Composite -3499 2857 2370 1 758 590 184 0 0 chr2L 22712612 22712721 -298823 - CIRCE LINE Composite -5085 1271 1163 1 758 517 192 298 5 chr2L 22712717 22712898 -298646 + ROO_I LTR Pao 5941 6174 -2082 1 758 897 144 141 22 chr2L 22712935 22713120 -298424 + ROO_I LTR Pao 7407 7613 -643 1 758 486 232 87 74 chr2L 22713140 22713452 -298092 + NINJA_LTR LTR Pao 1 316 -1 1 758 456 110 0 14 chr2L 22713454 22713528 -298016 + NINJA_I LTR Pao 3 75 -5936 1 758 1113 188 78 35 chr2L 22713537 22713856 -297688 + NINJA_I LTR Pao 232 564 -5447 1 758 1902 101 139 0 chr2L 22713855 22714171 -297373 + NINJA_I LTR Pao 948 1307 -4704 1 758 9763 105 124 6 chr2L 22714176 22716800 -294744 + NINJA_I LTR Pao 2146 5080 -931 1 758 3083 104 131 2 chr2L 22716799 22717327 -294217 + NINJA_I LTR Pao 5338 5933 -78 1 758 2701 57 114 0 chr2L 22717971 22718375 -293169 + PROTOP DNA P 50 499 -3981 1 758 2735 47 292 21 chr2L 22718399 22718967 -292577 + PROTOP DNA P 2910 3631 -849 1 758 1823 112 64 3 chr2L 22718983 22719313 -292231 + PROTOP DNA P 4131 4480 0 1 758 369 85 0 0 chr2L 22719313 22719369 -292175 - I_DM LINE I -1031 5200 5145 1 758 8648 26 2 0 chr2L 22719370 22720423 -291121 - DMCR1A LINE CR1 0 4470 3416 1 758 5186 20 69 0 chr2L 22720411 22721060 -290484 - DMCR1A LINE CR1 -2486 1984 1291 1 758 896 77 42 0 chr2L 22721058 22721201 -290343 - I_DM LINE I -1087 5144 4996 1 758 990 161 17 13 chr2L 22721199 22721438 -290106 - I_DM LINE I -1820 4411 4172 1 758 821 112 60 42 chr2L 22721509 22721676 -289868 + Gypsy12A_LTR LTR Gypsy 416 585 -1695 1 758 376 70 18 0 chr2L 22721677 22721734 -289810 - BARI1 DNA Tc1 -1656 94 37 1 758 352 340 20 20 chr2L 22722453 22722708 -288836 - Jockey2 LINE Jockey -782 2646 2392 1 758 525 182 116 7 chr2L 22723566 22723704 -287840 + DNAREP1_DM LINE Penelope 1 153 -441 1 758 1591 131 255 25 chr2L 22724008 22724416 -287128 + DNAREP1_DM LINE Penelope 1 502 -92 1 758 2938 57 114 0 chr2L 22725084 22725488 -286056 + PROTOP DNA P 50 499 -3981 1 758 1086 48 246 10 chr2L 22725512 22725727 -285817 + PROTOP DNA P 2910 3175 -1305 1 758 11451 20 24 4 chr2L 22725734 22727065 -284479 - DOC2_DM LINE Jockey 0 4793 3436 1 758 16971 19 8 17 chr2L 22727063 22729076 -282468 - DOC2_DM LINE Jockey -2285 2508 514 1 758 1331 34 113 38 chr2L 22729071 22729257 -282287 - DOC2_DM LINE Jockey -4584 209 10 1 758 2553 48 68 27 chr2L 22729286 22729651 -281893 + PROTOP DNA P 3252 3631 -849 1 758 779 247 57 70 chr2L 22729649 22729727 -281817 + PROTOP_A DNA P 740 899 -206 1 758 1590 56 10 0 chr2L 22729727 22729922 -281622 - DIVER2_LTR LTR Pao 0 385 189 1 758 779 247 57 70 chr2L 22729922 22730019 -281525 + PROTOP_A DNA P 900 1104 -1 1 758 283 93 93 0 chr2L 22730019 22730071 -281473 - I_DM LINE I -1030 5201 5145 1 758 9265 25 1 1 chr2L 22730072 22731127 -280417 - DMCR1A LINE CR1 0 4470 3416 1 758 3577 25 69 0 chr2L 22731113 22731764 -279780 - DMCR1A LINE CR1 -2484 1986 1291 1 758 966 137 52 20 chr2L 22731762 22732133 -279411 - I_DM LINE I -1087 5144 4996 1 758 236 209 0 0 chr2L 22732254 22732297 -279247 + NOMAD_I LTR Gypsy 6530 6572 0 1 758 640 196 104 31 chr2L 22732508 22732837 -278707 - FB4_DM DNA Tc1 -3292 797 150 1 758 2047 42 35 14 chr2L 22733124 22733413 -278131 - S2_DM DNA Tc1 0 1735 1441 1 758 432 0 19 0 chr2L 22733411 22733464 -278080 - S2_DM DNA Tc1 -434 1301 1248 1 758 2731 55 103 0 chr2L 22733463 22733842 -277702 - S2_DM DNA Tc1 -169 1566 1149 1 758 1470 97 60 0 chr2L 22733841 22734055 -277489 - S2_DM DNA Tc1 -1076 659 433 1 758 9285 28 10 0 chr2L 22734055 22735149 -276395 - PROTOP_A DNA P 0 1105 1 1 758 2235 101 68 3 chr2L 22735149 22735516 -276028 - S2_DM DNA Tc1 -1296 439 49 1 758 283 206 15 0 chr2L 22736066 22736134 -275410 - Gypsy8_I LTR Gypsy -4268 79 11 1 758 351 109 18 0 chr2L 22738162 22738217 -273327 - FB4_DM DNA Tc1 0 4089 4034 1 758 1244 122 165 36 chr2L 22738236 22738727 -272817 + DNAREP1_DM LINE Penelope 1 594 0 1 758 22 56 0 0 chr2L 22739068 22739104 -272440 + AT_rich Low_complexity Low_complexity 1 36 0 1 758 1156 256 17 37 chr2L 22739214 22739623 -271921 - TOM_I LTR Gypsy -529 5583 5183 1 758 327 310 56 19 chr2L 22739608 22739769 -271775 - TOM_I LTR Gypsy -1071 5041 4875 1 758 4348 47 57 5 chr2L 22739773 22740349 -271195 + FB4_DM DNA Tc1 1 606 -3483 1 758 34 24 0 0 chr2L 22742742 22742783 -268761 + AT_rich Low_complexity Low_complexity 1 41 0 1 758 21 36 0 0 chr2L 22743026 22743054 -268490 + AT_rich Low_complexity Low_complexity 1 28 0 1 758 25 0 0 0 chr2L 22743263 22743288 -268256 + AT_rich Low_complexity Low_complexity 1 25 0 1 758 666 242 114 20 chr2L 22743292 22743494 -268050 - IDEFIX_LTR LTR Gypsy -135 459 239 1 758 310 53 0 0 chr2L 22743619 22743657 -267887 - IDEFIX_LTR LTR Gypsy -556 38 1 1 758 286 79 0 0 chr2L 22743625 22743663 -267881 + BARI1 DNA Tc1 3 40 -1710 1 758 264 68 250 0 chr2L 22744266 22744310 -267234 + DNAREP1_DM LINE Penelope 68 122 -472 1 758 648 138 121 0 chr2L 22744323 22744439 -267105 + DNAREP1_DM LINE Penelope 465 594 0 1 758 346 114 48 48 chr2L 22744934 22745017 -266527 + PROTOP DNA P 624 707 -3773 1 758 443 95 0 0 chr2L 22745018 22745081 -266463 + PROTOP DNA P 1009 1071 -3409 1 758 1119 86 0 7 chr2L 22745079 22745232 -266312 + PROTOP DNA P 3957 4108 -372 1 758 1057 79 163 18 chr2L 22745589 22745871 -265673 + S2_DM DNA Tc1 49 371 -1364 1 758 2881 49 134 31 chr2L 22746005 22746549 -264995 - S2_DM DNA Tc1 -60 1675 1076 1 758 625 122 78 0 chr2L 22746550 22746665 -264879 + I_DM LINE I 5059 5182 -1049 1 758 22 0 0 0 chr2L 22747314 22747336 -264208 + AT_rich Low_complexity Low_complexity 1 22 0 1 758 1568 132 270 13 chr2L 22747339 22747731 -263813 - DNAREP1_DM LINE Penelope -101 493 1 1 758 352 340 20 20 chr2L 22748677 22748932 -262612 + Jockey2 LINE Jockey 2392 2646 -782 1 758 2597 59 245 10 chr2L 22749578 22750154 -261390 + PROTOP DNA P 2920 3631 -849 1 758 372 130 0 13 chr2L 22750152 22750230 -261314 + PROTOP_A DNA P 740 816 -289 1 758 3290 34 3 5 chr2L 22750230 22750616 -260928 - DIVER2_LTR LTR Pao 0 385 1 1 758 9571 28 0 0 chr2L 22750616 22751709 -259835 - DIVER2_I LTR Pao 0 4147 3055 1 758 2494 45 151 2 chr2L 22751706 22752162 -259382 - DIVER2_I LTR Pao -1206 2941 2417 1 758 9975 136 97 101 chr2L 22753183 22755483 -256061 - DIVER2_I LTR Pao -1705 2442 173 1 758 204 40 0 0 chr2L 22755483 22755508 -256036 + (TATG)n Simple_repeat Simple_repeat 3 27 0 1 758 9975 136 97 101 chr2L 22755508 22755659 -255885 - DIVER2_I LTR Pao -3975 172 3 1 758 1565 62 10 0 chr2L 22755659 22755854 -255690 - DIVER2_LTR LTR Pao 0 385 189 1 758 750 101 0 9 chr2L 22755842 22755952 -255592 + PROTOP DNA P 4371 4479 -1 1 758 292 74 93 0 chr2L 22755952 22756003 -255541 - I_DM LINE I -1031 5200 5145 1 758 9341 23 1 0 chr2L 22756006 22757060 -254484 - DMCR1A LINE CR1 0 4470 3416 1 758 3608 23 69 0 chr2L 22757046 22757697 -253847 - DMCR1A LINE CR1 -2484 1986 1291 1 758 1054 135 36 24 chr2L 22757695 22758075 -253469 - I_DM LINE I -1781 4450 4172 1 758 888 112 60 42 chr2L 22758146 22758313 -253231 + Gypsy12A_LTR LTR Gypsy 416 585 -1695 1 758 408 70 18 0 chr2L 22758314 22758371 -253173 - BARI1 DNA Tc1 -1656 94 37 1 758 2245 326 55 30 chr2L 22759477 22760797 -250747 + NINJA_I LTR Pao 985 2337 -3674 1 758 2688 293 54 16 chr2L 22760801 22761814 -249730 + NINJA_I LTR Pao 2473 3524 -2487 1 758 430 320 44 11 chr2L 22762001 22762273 -249271 - NINJA_I LTR Pao 0 6011 5731 1 758 766 244 11 6 chr2L 22762321 22762498 -249046 + NINJA_I LTR Pao 4027 4204 -1807 1 758 345 321 40 13 chr2L 22762505 22762729 -248815 - NINJA_I LTR Pao -51 5960 5731 1 758 1404 302 9 2 chr2L 22762777 22763222 -248322 + NINJA_I LTR Pao 4027 4474 -1537 1 758 2152 302 66 21 chr2L 22763394 22764421 -247123 + NINJA_I LTR Pao 4939 6011 0 1 758 1812 286 2 2 chr2L 22764608 22765116 -246428 - NINJA_I LTR Pao -2487 3524 3017 1 758 1093 300 41 29 chr2L 22765133 22765621 -245923 - NINJA_I LTR Pao -3045 2966 2473 1 758 2255 327 55 30 chr2L 22765625 22766944 -244600 - NINJA_I LTR Pao -3674 2337 985 1 758 408 70 18 0 chr2L 22768043 22768100 -243444 + BARI1 DNA Tc1 37 94 -1656 1 758 837 119 60 48 chr2L 22768101 22768269 -243275 - Gypsy12A_LTR LTR Gypsy -1695 585 416 1 758 1061 136 36 25 chr2L 22768340 22768718 -242826 + I_DM LINE I 4172 4450 -1781 1 758 3599 21 69 0 chr2L 22768719 22769369 -242175 + DMCR1A LINE CR1 1292 1986 -2484 1 758 8904 27 25 0 chr2L 22769355 22770384 -241160 + DMCR1A LINE CR1 3416 4470 0 1 758 413 103 0 14 chr2L 22770385 22770441 -241103 + I_DM LINE I 5145 5199 -1032 1 758 1988 113 71 3 chr2L 22770441 22770779 -240765 - PROTOP DNA P 0 4480 4120 1 758 2700 52 265 10 chr2L 22770787 22771362 -240182 - PROTOP DNA P -849 3631 2910 1 758 2938 57 114 0 chr2L 22771386 22771790 -239754 - PROTOP DNA P -3981 499 50 1 758 22 0 0 0 chr2L 22772432 22772454 -239090 + AT_rich Low_complexity Low_complexity 1 22 0 1 758 1625 131 264 13 chr2L 22772457 22772851 -238693 - DNAREP1_DM LINE Penelope -101 493 1 1 758 584 178 47 14 chr2L 22773181 22773329 -238215 - DNAREP1_DM LINE Penelope -441 153 1 1 758 352 340 20 20 chr2L 22774187 22774442 -237102 + Jockey2 LINE Jockey 2392 2646 -782 1 758 408 70 18 0 chr2L 22775161 22775218 -236326 + BARI1 DNA Tc1 37 94 -1656 1 758 837 119 60 48 chr2L 22775219 22775387 -236157 - Gypsy12A_LTR LTR Gypsy -1695 585 416 1 758 1061 136 36 25 chr2L 22775458 22775836 -235708 + I_DM LINE I 4172 4450 -1781 1 758 3599 21 69 0 chr2L 22775837 22776487 -235057 + DMCR1A LINE CR1 1292 1986 -2484 1 758 8904 27 25 0 chr2L 22776473 22777502 -234042 + DMCR1A LINE CR1 3416 4470 0 1 758 413 103 0 14 chr2L 22777503 22777559 -233985 + I_DM LINE I 5145 5199 -1032 1 758 1988 113 71 3 chr2L 22777559 22777897 -233647 - PROTOP DNA P 0 4480 4120 1 758 3453 48 266 10 chr2L 22777905 22778480 -233064 - PROTOP DNA P -849 3631 2910 1 758 2845 57 114 0 chr2L 22778504 22778908 -232636 - PROTOP DNA P -3981 499 50 1 758 22 0 0 0 chr2L 22779550 22779572 -231972 + AT_rich Low_complexity Low_complexity 1 22 0 1 758 1561 129 260 13 chr2L 22779592 22779969 -231575 - DNAREP1_DM LINE Penelope -124 470 1 1 758 556 178 47 14 chr2L 22780299 22780447 -231097 - DNAREP1_DM LINE Penelope -441 153 1 1 758 1456 88 3 27 chr2L 22780626 22780857 -230687 - STALKER4_LTR LTR Gypsy -3 399 209 1 758 47 0 0 0 chr2L 22781367 22781414 -230130 + AT_rich Low_complexity Low_complexity 1 47 0 1 758 446 330 39 46 chr2L 22782034 22782439 -229105 + Gypsy4_I LTR Gypsy 1437 1784 -5228 1 758 821 317 39 24 chr2L 22783757 22784212 -227332 + Gypsy4_I LTR Gypsy 2255 3414 -2132 1 758 1462 34 48 0 chr2L 22784212 22784420 -227124 + TLD2 Unknown Unknown 1 218 0 1 758 821 317 39 24 chr2L 22784420 22784525 -227019 + Gypsy4_I LTR Gypsy 3415 3687 -1859 1 758 23 0 0 0 chr2L 22784655 22784678 -226866 + AT_rich Low_complexity Low_complexity 1 23 0 1 758 47 0 0 0 chr2L 22786542 22786589 -224955 + AT_rich Low_complexity Low_complexity 1 47 0 1 758 1854 14 0 0 chr2L 22786605 22786817 -224727 - STALKER4_LTR LTR Gypsy -190 212 1 1 758 11166 11 17 1 chr2L 22786817 22788162 -223382 - STALKER4_I LTR Gypsy 0 6530 5164 1 758 18191 146 8 17 chr2L 22788156 22791974 -219570 + BATUMI_I LTR Pao 4081 7843 -71 1 758 2296 25 0 27 chr2L 22792025 22792319 -219225 + BATUMI_I LTR Pao 6999 7284 -679 1 758 29500 152 86 78 chr2L 22792319 22800213 -211331 + BATUMI_I LTR Pao 1 7963 0 1 758 2320 21 0 27 chr2L 22800213 22800504 -211040 + BATUMI_I LTR Pao 7002 7284 -679 1 758 17354 11 0 1 chr2L 22800504 22802506 -209038 - STALKER4_I LTR Gypsy -2856 3674 1673 1 758 266 0 29 0 chr2L 22802506 22802540 -209004 + (TTA)n Simple_repeat Simple_repeat 3 37 0 1 758 4649 100 114 30 chr2L 22802540 22803613 -207931 - STALKER4_I LTR Gypsy -5026 1504 291 1 758 25 0 0 0 chr2L 22803637 22803662 -207882 + AT_rich Low_complexity Low_complexity 1 25 0 1 758 2343 74 2 19 chr2L 22803750 22804089 -207455 - STALKER4_LTR LTR Gypsy -3 399 85 1 758 717 12 12 0 chr2L 22804416 22804502 -207042 + ROO_LTR LTR Pao 1 87 -341 1 758 1077 15 0 8 chr2L 22804491 22804624 -206920 + ROO_I LTR Pao 148 279 -7977 1 94 51341 19 7 2 chr2L 22804617 22810722 -200822 + ROO_I LTR Pao 772 6902 -1354 1 759 5975 27 4 63 chr2L 22810733 22811567 -199977 + ROO_I LTR Pao 7473 8256 0 1 759 3746 19 2 0 chr2L 22811567 22811994 -199550 + ROO_LTR LTR Pao 1 428 0 1 759 440 82 0 0 chr2L 22812447 22812508 -199036 + BARI1 DNA Tc1 37 97 -1653 1 759 1870 140 172 34 chr2L 22812508 22813101 -198443 - Gypsy12A_LTR LTR Gypsy -1605 675 1 1 759 2267 99 128 15 chr2L 22813101 22813720 -197824 + TC1-2_DM DNA Tc1 953 1641 -3 1 759 37 23 0 0 chr2L 22813730 22813774 -197770 + AT_rich Low_complexity Low_complexity 1 44 0 1 759 1067 152 102 5 chr2L 22814731 22814936 -196608 - DNAREP1_DM LINE Penelope -75 519 295 1 759 387 159 16 0 chr2L 22814967 22815030 -196514 + DIVER2_I LTR Pao 4082 4145 -2 1 759 1040 311 65 65 chr2L 22815500 22816158 -195386 + DIVER2_I LTR Pao 599 1256 -2891 1 759 239 333 0 0 chr2L 22816258 22816348 -195196 + DIVER2_I LTR Pao 1441 1530 -2617 1 759 266 274 0 0 chr2L 22816796 22816869 -194675 + DIVER2_I LTR Pao 1324 1396 -2751 1 759 28 79 0 0 chr2L 22817115 22817178 -194366 + AT_rich Low_complexity Low_complexity 1 63 0 1 759 555 128 34 17 chr2L 22817234 22817353 -194191 + DNAREP1_DM LINE Penelope 189 309 -285 1 759 633 119 17 8 chr2L 22817349 22817468 -194076 - S_DM DNA Tc1 -1616 120 1 1 759 278 57 0 0 chr2L 22818694 22818729 -192815 + PROTOP DNA P 1 35 -4445 1 759 2103 147 141 28 chr2L 22818754 22819286 -192258 + PROTOP DNA P 98 689 -3791 1 759 228 257 158 0 chr2L 22819286 22819387 -192157 + PROTOP DNA P 1468 1584 -2896 1 759 1249 155 86 37 chr2L 22819386 22819654 -191890 + PROTOP DNA P 4192 4479 -1 1 759 240 150 100 14 chr2L 22819763 22819846 -191698 + DNAREP1_DM LINE Penelope 302 335 -259 1 759 1290 151 101 19 chr2L 22819843 22820100 -191444 + DNAREP1_DM LINE Penelope 317 594 0 1 759 867 171 144 19 chr2L 22820906 22821163 -190381 - DNAREP1_DM LINE Penelope -301 293 5 1 759 613 102 0 48 chr2L 22821229 22821332 -190212 - DNAREP1_DM LINE Penelope -120 474 377 1 759 28 48 0 0 chr2L 22821351 22821393 -190151 + AT_rich Low_complexity Low_complexity 1 42 0 1 759 333 108 185 0 chr2L 22821855 22821920 -189624 - DNAREP1_DM LINE Penelope -230 364 288 1 759 23 92 0 0 chr2L 22821961 22822026 -189518 + AT_rich Low_complexity Low_complexity 1 65 0 1 759 1371 128 154 50 chr2L 22822045 22822489 -189055 - PROTOP_B DNA P -665 488 1 1 759 24 32 0 0 chr2L 22822761 22822792 -188752 + AT_rich Low_complexity Low_complexity 1 31 0 1 759 837 156 121 6 chr2L 22822855 22823029 -188515 + DNAREP1_DM LINE Penelope 401 594 0 1 759 1499 132 235 2 chr2L 22823461 22823915 -187629 - DMCR1A LINE CR1 -343 4127 3568 1 759 399 195 8 144 chr2L 22823951 22824083 -187461 - DMCR1A LINE CR1 -3447 1023 910 1 759 2326 187 92 13 chr2L 22824096 22824648 -186896 - DMCR1A LINE CR1 -3718 752 157 1 759 742 139 310 9 chr2L 22825062 22825299 -186245 + DNAREP1_DM LINE Penelope 3 310 -284 1 759 929 124 10 40 chr2L 22825670 22825902 -185642 + DNAREP1_DM LINE Penelope 1 264 -330 1 759 1118 133 10 35 chr2L 22826158 22826361 -185183 - MAX_I LTR Pao -594 7320 7123 1 759 1301 142 211 9 chr2L 22826422 22826971 -184573 + DOC LINE Jockey 24 684 -4041 1 759 8643 98 61 18 chr2L 22826971 22828329 -183215 + DOC LINE Jockey 941 2356 -2369 1 759 877 96 173 0 chr2L 22828340 22828496 -183048 + DOC LINE Jockey 2435 2617 -2108 1 759 1451 141 204 3 chr2L 22828493 22828869 -182675 + DOC LINE Jockey 2806 3257 -1468 1 759 1904 92 0 4 chr2L 22828856 22829119 -182425 + DOC LINE Jockey 3410 3671 -1054 1 759 2924 94 111 6 chr2L 22829121 22829591 -181953 - PROTOP DNA P -2 4478 3960 1 759 421 108 0 0 chr2L 22829587 22829652 -181892 - PROTOP DNA P -3407 1073 1009 1 759 1065 78 187 3 chr2L 22829653 22829939 -181605 - PROTOP DNA P -3773 707 367 1 759 384 94 0 0 chr2L 22829946 22829999 -181545 - PROTOP_B DNA P -1100 53 1 1 759 4250 100 180 0 chr2L 22829999 22830734 -180810 + DOC LINE Jockey 3665 4532 -193 1 759 267 30 0 0 chr2L 22830733 22830766 -180778 + DOC LINE Jockey 4655 4687 -38 1 759 2918 181 15 6 chr2L 22830762 22831291 -180253 - MAX_I LTR Pao -806 7108 6575 1 759 312 157 0 0 chr2L 22831281 22831332 -180212 - MAX_I LTR Pao -1795 6119 6069 1 759 22 35 0 0 chr2L 22832286 22832315 -179229 + AT_rich Low_complexity Low_complexity 1 29 0 1 759 23 0 0 0 chr2L 22832592 22832615 -178929 + AT_rich Low_complexity Low_complexity 1 23 0 1 759 357 236 112 9 chr2L 22835636 22835743 -175801 - DNAREP1_DM LINE Penelope -127 467 350 1 759 46 0 0 0 chr2L 22836156 22836202 -175342 + AT_rich Low_complexity Low_complexity 1 46 0 1 759 1984 43 8 45 chr2L 22836346 22836614 -174930 + BLOOD_LTR LTR Gypsy 1 258 -141 1 759 433 321 47 44 chr2L 22837023 22837614 -173930 + Gypsy4_I LTR Gypsy 650 1784 -5228 1 759 821 317 39 24 chr2L 22838935 22839390 -172154 + Gypsy4_I LTR Gypsy 2255 3414 -2132 1 759 1462 34 48 0 chr2L 22839390 22839598 -171946 + TLD2 Unknown Unknown 1 218 0 1 759 821 317 39 24 chr2L 22839598 22839703 -171841 + Gypsy4_I LTR Gypsy 3415 3687 -1859 1 759 23 0 0 0 chr2L 22839833 22839856 -171688 + AT_rich Low_complexity Low_complexity 1 23 0 1 759 46 0 0 0 chr2L 22841719 22841765 -169779 + AT_rich Low_complexity Low_complexity 1 46 0 1 759 23 0 0 0 chr2L 22842592 22842615 -168929 + AT_rich Low_complexity Low_complexity 1 23 0 1 759 356 249 117 35 chr2L 22843353 22843524 -168020 + DNAREP1_DM LINE Penelope 320 504 -90 1 759 26 30 0 0 chr2L 22843870 22843903 -167641 + AT_rich Low_complexity Low_complexity 1 33 0 1 759 250 108 0 0 chr2L 22844021 22844058 -167486 - DNAREP1_DM LINE Penelope -11 583 547 1 759 282 170 0 0 chr2L 22844064 22844111 -167433 - DNAREP1_DM LINE Penelope -207 387 341 1 759 21 0 0 0 chr2L 22844361 22844382 -167162 + AT_rich Low_complexity Low_complexity 1 21 0 1 759 455 71 0 14 chr2L 22844529 22844600 -166944 - DMCR1A LINE CR1 -3209 1261 1192 1 759 2441 40 0 0 chr2L 22844595 22844894 -166650 + ROOA_LTR LTR Pao 88 386 0 1 759 530 203 8 93 chr2L 22844894 22845111 -166433 - DMCR1A LINE CR1 -3285 1185 910 1 759 2314 189 92 13 chr2L 22845124 22845676 -165868 - DMCR1A LINE CR1 -3718 752 157 1 759 248 91 0 22 chr2L 22845701 22845746 -165798 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 759 1256 174 72 10 chr2L 22846108 22846398 -165146 + DNAREP1_DM LINE Penelope 3 310 -284 1 759 929 124 10 40 chr2L 22846797 22847029 -164515 + DNAREP1_DM LINE Penelope 1 264 -330 1 759 1127 133 10 35 chr2L 22847285 22847488 -164056 - MAX_I LTR Pao -594 7320 7123 1 759 1301 142 211 9 chr2L 22847549 22848098 -163446 + DOC LINE Jockey 24 684 -4041 1 759 8473 99 130 17 chr2L 22848098 22849604 -161940 + DOC LINE Jockey 941 2617 -2108 1 759 1451 137 152 2 chr2L 22849601 22849994 -161550 + DOC LINE Jockey 2806 3257 -1468 1 759 1904 92 0 4 chr2L 22849981 22850244 -161300 + DOC LINE Jockey 3410 3671 -1054 1 759 2924 94 111 6 chr2L 22850246 22850716 -160828 - PROTOP DNA P -2 4478 3960 1 759 421 108 0 0 chr2L 22850712 22850777 -160767 - PROTOP DNA P -3407 1073 1009 1 759 1065 78 187 3 chr2L 22850778 22851064 -160480 - PROTOP DNA P -3773 707 367 1 759 384 94 0 0 chr2L 22851071 22851124 -160420 - PROTOP DNA P -4427 53 1 1 759 4228 104 176 0 chr2L 22851124 22851861 -159683 + DOC LINE Jockey 3665 4532 -193 1 759 267 30 0 0 chr2L 22851860 22851893 -159651 + DOC LINE Jockey 4655 4687 -38 1 759 3559 178 35 6 chr2L 22851889 22852538 -159006 - MAX_I LTR Pao -806 7108 6441 1 759 523 79 153 20 chr2L 22852566 22852713 -158831 + DNAREP1_DM LINE Penelope 198 405 -189 1 759 12000 46 35 1 chr2L 22852925 22854929 -156615 - Baggins1 LINE LOA 0 5453 3381 1 759 3608 40 100 0 chr2L 22854930 22855478 -156066 - Baggins1 LINE LOA -2752 2701 2099 1 759 451 178 65 0 chr2L 22855655 22855762 -155782 - DNAREP1_DM LINE Penelope -299 295 182 1 759 321 291 0 0 chr2L 22855791 22855877 -155667 + DMRT1C LINE R1 4175 4260 -1183 1 759 235 311 0 0 chr2L 22856333 22856407 -155137 - Gypsy9_I LTR Gypsy -186 4491 4418 1 759 1213 296 106 26 chr2L 22856466 22857318 -154226 - Gypsy4_I LTR Gypsy -423 5865 5018 1 759 1797 60 4 4 chr2L 22857328 22857562 -153982 - Baggins1 LINE LOA -1383 4070 3837 1 759 13831 29 18 0 chr2L 22857555 22859212 -152332 + FW_DM LINE Jockey 2395 4080 -612 1 759 791 69 0 0 chr2L 22859239 22859340 -152204 - Baggins1 LINE LOA -1611 3842 3742 1 759 8376 32 30 22 chr2L 22859756 22860845 -150699 + PROTOP_A DNA P 8 1105 0 1 759 258 258 0 0 chr2L 22861435 22861501 -150043 + HMSBEAGLE_I LTR Gypsy 1500 1565 -4964 1 759 493 285 65 35 chr2L 22861545 22861774 -149770 + LINEJ1_DM LINE Jockey 1940 2175 -2845 1 759 2029 34 3 67 chr2L 22861788 22862073 -149471 - MDG3_LTR LTR Gypsy 0 267 1 1 759 1265 349 34 34 chr2L 22862172 22863285 -148259 + LINEJ1_DM LINE Jockey 2989 4101 -919 1 759 462 307 75 56 chr2L 22863287 22863804 -147740 + Jockey2 LINE Jockey 2604 3130 -298 1 759 42 20 0 0 chr2L 22864024 22864073 -147471 + AT_rich Low_complexity Low_complexity 1 49 0 1 759 3929 299 33 20 chr2L 22864077 22865790 -145754 + HMSBEAGLE_I LTR Gypsy 3246 4980 -1549 1 759 1249 296 34 15 chr2L 22865820 22866349 -145195 + HMSBEAGLE_I LTR Gypsy 5234 5772 -757 1 759 239 231 0 0 chr2L 22867818 22867870 -143674 + HMSBEAGLE_I LTR Gypsy 6476 6527 -2 1 759 571 188 28 21 chr2L 22868902 22869043 -142501 - DNAREP1_DM LINE Penelope -269 325 184 1 759 1344 120 256 28 chr2L 22869059 22869372 -142172 - IVK_DM LINE I -2 5400 5016 1 759 817 211 38 92 chr2L 22869372 22869612 -141932 - DMLTR5 LTR Gypsy 0 266 40 1 759 232 159 0 0 chr2L 22869654 22869698 -141846 - DMLTR5 LTR Gypsy -220 46 3 1 759 939 102 376 19 chr2L 22869708 22869969 -141575 - HMSBEAGLE_I LTR Gypsy -766 5763 5410 1 759 8276 94 50 0 chr2L 22869991 22871179 -140365 - HMSBEAGLE_I LTR Gypsy -1311 5218 3971 1 759 6843 26 22 7 chr2L 22871177 22872057 -139487 + PROTOP DNA P 518 1410 -3070 1 759 3783 29 0 15 chr2L 22872054 22872517 -139027 + PROTOP_A DNA P 650 1105 0 1 759 1285 130 41 57 chr2L 22872539 22872784 -138760 - IVK_DM LINE I -383 5019 4779 1 759 3675 148 183 49 chr2L 22872783 22873727 -137817 - IVK_DM LINE I -857 4545 3475 1 759 23 0 0 0 chr2L 22873947 22873970 -137574 + AT_rich Low_complexity Low_complexity 1 23 0 1 759 21 36 0 0 chr2L 22874121 22874149 -137395 + AT_rich Low_complexity Low_complexity 1 28 0 1 759 29 0 0 0 chr2L 22874333 22874362 -137182 + AT_rich Low_complexity Low_complexity 1 29 0 1 759 225 94 0 0 chr2L 22875584 22875616 -135928 + (CATA)n Simple_repeat Simple_repeat 3 34 0 1 759 33 0 0 0 chr2L 22875956 22875989 -135555 + AT_rich Low_complexity Low_complexity 1 33 0 1 759 1222 150 200 0 chr2L 22879046 22879346 -132198 + FB4_DM DNA Tc1 8 367 -3722 1 759 30 45 0 0 chr2L 22879399 22879443 -132101 + AT_rich Low_complexity Low_complexity 1 44 0 1 759 6802 133 157 9 chr2L 22879601 22880955 -130589 + FB4_DM DNA Tc1 1107 2660 -1429 1 759 268 325 84 28 chr2L 22881046 22881261 -130283 - ACCORD2_I LTR Gypsy -6460 752 526 1 759 1888 124 156 5 chr2L 22881312 22881685 -129859 + DNAREP1_DM LINE Penelope 149 577 -17 1 759 657 59 147 0 chr2L 22881689 22881791 -129753 - FB4_DM DNA Tc1 -3972 117 1 1 759 283 149 44 33 chr2L 22882153 22882243 -129301 + (TTATA)n Simple_repeat Simple_repeat 1 91 0 1 759 26 30 0 0 chr2L 22882796 22882829 -128715 + AT_rich Low_complexity Low_complexity 1 33 0 1 759 370 242 117 35 chr2L 22883169 22883340 -128204 - DNAREP1_DM LINE Penelope -90 504 320 1 759 23 0 0 0 chr2L 22884078 22884101 -127443 + AT_rich Low_complexity Low_complexity 1 23 0 1 759 28 48 0 0 chr2L 22885429 22885471 -126073 + AT_rich Low_complexity Low_complexity 1 42 0 1 759 360 103 35 0 chr2L 22885880 22885938 -125606 - DNAREP1_DM LINE Penelope 0 594 535 1 759 1040 116 0 6 chr2L 22885966 22886131 -125413 + DNAREP1_DM LINE Penelope 1 164 -430 1 759 3728 66 149 3 chr2L 22886377 22887383 -124161 + PROTOP_B DNA P 1 1150 -3 1 759 1866 99 0 4 chr2L 22887384 22887647 -123897 - DOC LINE Jockey -1054 3671 3410 1 759 408 141 0 34 chr2L 22887634 22887722 -123822 - DOC LINE Jockey -1468 3257 3173 1 759 1665 122 105 2 chr2L 22887854 22888241 -123303 + DNAREP1_DM LINE Penelope 128 594 0 1 759 267 267 9 0 chr2L 22888990 22889095 -122449 - Gypsy5_I LTR Gypsy -731 5778 5673 1 759 233 295 30 30 chr2L 22889437 22889570 -121974 - Gypsy5_I LTR Gypsy -874 5635 5503 1 759 23 0 0 0 chr2L 22889788 22889811 -121733 + AT_rich Low_complexity Low_complexity 1 23 0 1 759 240 271 64 18 chr2L 22890266 22890375 -121169 + P_DG DNA P 2772 2885 -3 1 759 988 101 474 4 chr2L 22890375 22890513 -121031 - DNAREP1_DM LINE Penelope -128 466 218 1 759 800 174 66 26 chr2L 22890575 22890812 -120732 + DNAREP1_DM LINE Penelope 100 332 -262 1 759 28 61 0 0 chr2L 22891484 22891533 -120011 + AT_rich Low_complexity Low_complexity 1 49 0 1 759 1767 47 158 6 chr2L 22891579 22891939 -119605 + DMCR1A LINE CR1 3867 4281 -189 1 759 21 0 0 0 chr2L 22892053 22892074 -119470 + AT_rich Low_complexity Low_complexity 1 21 0 1 759 46 19 0 0 chr2L 22892285 22892338 -119206 + AT_rich Low_complexity Low_complexity 1 53 0 1 759 271 229 14 0 chr2L 22893817 22893887 -117657 - MINOS DNA Tc1 -40 1735 1665 1 759 478 243 20 34 chr2L 22893864 22894013 -117531 + P_DG DNA P 2739 2885 -3 1 759 2531 112 53 2 chr2L 22893885 22894279 -117265 - DNAREP1_DM LINE Penelope 0 594 181 1 759 31 82 0 0 chr2L 22894455 22894528 -117016 + AT_rich Low_complexity Low_complexity 1 73 0 1 759 21 0 0 0 chr2L 22894585 22894606 -116938 + AT_rich Low_complexity Low_complexity 1 21 0 1 759 24 0 0 0 chr2L 22894852 22894876 -116668 + AT_rich Low_complexity Low_complexity 1 24 0 1 759 36 23 0 0 chr2L 22895305 22895348 -116196 + AT_rich Low_complexity Low_complexity 1 43 0 1 759 752 282 67 31 chr2L 22895499 22895845 -115699 + G5_DM LINE Jockey 3447 3948 -908 1 759 289 255 132 66 chr2L 22895895 22896168 -115376 + DNAREP1_DM LINE Penelope 25 315 -279 1 759 395 273 113 28 chr2L 22896215 22896392 -115152 + DNAREP1_DM LINE Penelope 272 463 -131 1 759 349 321 37 0 chr2L 22899583 22899717 -111827 + OSVALDO_I LTR Gypsy 2572 2710 -3943 1 759 259 235 0 0 chr2L 22899775 22899826 -111718 + OSVALDO_I LTR Gypsy 3029 3079 -3574 1 759 7744 70 16 15 chr2L 22901302 22902397 -109147 + TRANSIB2 DNA Transib 39 1134 -1710 1 759 1541 121 310 2 chr2L 22902517 22903049 -108495 - DNAREP1_DM LINE Penelope 0 594 1 1 759 24 100 0 0 chr2L 22904372 22904452 -107092 + AT_rich Low_complexity Low_complexity 1 80 0 1 759 32 0 0 0 chr2L 22908888 22908920 -102624 + AT_rich Low_complexity Low_complexity 1 32 0 1 759 313 154 8 148 chr2L 22908920 22909042 -102502 + DNAREP1_DM LINE Penelope 98 202 -392 1 759 629 130 56 0 chr2L 22909025 22909133 -102411 + DNAREP1_DM LINE Penelope 314 427 -167 1 759 531 96 11 46 chr2L 22909146 22909233 -102311 + DNAREP1_DM LINE Penelope 388 471 -123 1 759 477 118 189 22 chr2L 22909261 22909405 -102139 - DNAREP1_DM LINE Penelope -290 304 117 1 759 390 200 0 22 chr2L 22909455 22909547 -101997 + DMLTR5 LTR Gypsy 172 261 -5 1 759 27 0 0 0 chr2L 22909547 22909574 -101970 + AT_rich Low_complexity Low_complexity 1 27 0 1 759 22 0 0 0 chr2L 22910572 22910594 -100950 + AT_rich Low_complexity Low_complexity 1 22 0 1 759 737 306 48 53 chr2L 22910965 22911047 -100497 + GTWIN_I LTR Gypsy 2780 2876 -3545 1 759 952 94 113 20 chr2L 22911047 22911242 -100302 + TLD2 Unknown Unknown 6 218 0 1 759 737 306 48 53 chr2L 22911242 22911859 -99685 + GTWIN_I LTR Gypsy 2877 3609 -2812 1 759 231 260 13 13 chr2L 22912418 22912496 -99048 + Gypsy6_I LTR Gypsy 4629 4706 -2306 1 759 250 197 32 32 chr2L 22912673 22912736 -98808 + BURDOCK_I LTR Gypsy 4419 4481 -1379 1 759 21 57 0 0 chr2L 22913086 22913121 -98423 + AT_rich Low_complexity Low_complexity 1 35 0 1 759 226 150 0 0 chr2L 22913447 22913487 -98057 + NOMAD_I LTR Gypsy 5958 5997 -575 1 759 33 0 0 0 chr2L 22914018 22914051 -97493 + AT_rich Low_complexity Low_complexity 1 33 0 1 759 499 115 52 0 chr2L 22914529 22914625 -96919 + PROTOP_B DNA P 252 352 -801 1 759 2575 111 48 37 chr2L 22914790 22915252 -96292 + QUASIMODO_LTR LTR Gypsy 29 658 0 1 759 802 150 332 42 chr2L 22915440 22915705 -95839 + FB4_DM DNA Tc1 1 342 -3747 1 759 1297 175 43 27 chr2L 22916456 22916785 -94759 + I_DM LINE I 1585 1918 -4313 1 759 2762 128 124 6 chr2L 22916787 22917318 -94226 + DNAREP1_DM LINE Penelope 1 594 0 1 759 408 172 62 47 chr2L 22917512 22917640 -93904 - DNAREP1_DM LINE Penelope -284 310 181 1 759 21 0 0 0 chr2L 22918118 22918139 -93405 + AT_rich Low_complexity Low_complexity 1 21 0 1 759 249 175 23 70 chr2L 22919048 22919134 -92410 - DNAREP1_DM LINE Penelope -342 252 171 1 759 916 167 204 30 chr2L 22919290 22919750 -91794 - DNAREP1_DM LINE Penelope -13 581 42 1 759 347 172 16 0 chr2L 22919797 22919861 -91683 + DM297_I LTR Gypsy 4270 4334 -1833 1 759 1059 314 60 20 chr2L 22919872 22920408 -91136 + TOM_I LTR Gypsy 4485 5041 -1071 1 759 958 275 8 44 chr2L 22920407 22920791 -90753 + TOM_I LTR Gypsy 5183 5552 -560 1 759 23 68 0 0 chr2L 22920881 22920925 -90619 + AT_rich Low_complexity Low_complexity 1 44 0 1 759 871 169 100 32 chr2L 22921471 22921691 -89853 + DNAREP1_DM LINE Penelope 3 237 -357 1 759 727 88 198 8 chr2L 22921691 22921817 -89727 - PROTOP DNA P -107 4373 4224 1 759 2099 70 309 6 chr2L 22921832 22922166 -89378 + Mariner2_DM DNA Tc1 126 561 -351 1 759 479 32 0 0 chr2L 22922168 22922230 -89314 + Mariner2_DM DNA Tc1 837 898 -14 1 759 3599 89 58 30 chr2L 22922416 22923041 -88503 - PROTOP DNA P -414 4066 3425 1 759 2234 99 101 8 chr2L 22923027 22923412 -88132 - PROTOP DNA P -1945 2535 2115 1 759 38 39 0 0 chr2L 22923559 22923611 -87933 + AT_rich Low_complexity Low_complexity 1 52 0 1 759 37 39 0 0 chr2L 22923682 22923733 -87811 + AT_rich Low_complexity Low_complexity 1 51 0 1 759 496 269 57 11 chr2L 22924283 22924460 -87084 - BS2 LINE Jockey -654 4067 3883 1 759 1333 215 191 0 chr2L 22924640 22924985 -86559 - BS2 LINE Jockey -1072 3649 3239 1 759 326 222 0 0 chr2L 22924991 22925054 -86490 - BS2 LINE Jockey -1688 3033 2971 1 759 864 110 214 0 chr2L 22925060 22925233 -86311 + DNAREP1_DM LINE Penelope 38 247 -347 1 759 260 122 0 0 chr2L 22925227 22925268 -86276 + DNAREP1_DM LINE Penelope 551 591 -3 1 759 801 348 14 10 chr2L 22925446 22925928 -85616 + Gypsy12_I LTR Gypsy 2897 3380 -2166 1 759 420 85 0 0 chr2L 22926449 22926508 -85036 + PROTOP_B DNA P 1 59 -1094 1 759 467 107 0 0 chr2L 22926502 22926577 -84967 + PROTOP_B DNA P 263 337 -816 1 759 302 173 11 138 chr2L 22926596 22926683 -84861 + PROTOP_B DNA P 422 497 -656 1 759 28 0 0 0 chr2L 22926722 22926750 -84794 + AT_rich Low_complexity Low_complexity 1 28 0 1 759 678 173 221 20 chr2L 22926935 22927227 -84317 - DNAREP1_DM LINE Penelope -54 540 70 1 759 818 76 280 26 chr2L 22927229 22927454 -84090 - Invader5_LTR LTR Gypsy -70 282 1 1 759 636 123 167 27 chr2L 22927453 22927603 -83941 - Invader5_I LTR Gypsy 0 3334 3164 1 759 757 134 56 7 chr2L 22927630 22927773 -83771 - Invader5_I LTR Gypsy -464 2870 2721 1 759 3863 190 63 43 chr2L 22927777 22929385 -82159 - Invader5_I LTR Gypsy -826 3273 284 1 759 313 67 22 0 chr2L 22929383 22929428 -82116 - Invader5_I LTR Gypsy -3265 69 24 1 759 2634 53 24 0 chr2L 22929428 22929766 -81778 - Invader5_LTR LTR Gypsy 0 352 7 1 759 5258 32 65 0 chr2L 22929755 22930449 -81095 + DOC5_DM LINE Jockey 1207 1945 -2737 1 759 2928 46 6 0 chr2L 22930458 22930824 -80720 + DOC5_DM LINE Jockey 2249 2616 -2066 1 759 846 131 70 139 chr2L 22930824 22931054 -80490 - ACCORD2_LTR LTR Gypsy 0 215 2 1 759 748 131 0 8 chr2L 22931054 22931176 -80368 - ACCORD2_I LTR Gypsy -9 7203 7083 1 759 2330 138 135 39 chr2L 22931160 22931997 -79547 - ACCORD2_I LTR Gypsy -6868 344 1 1 759 369 21 21 0 chr2L 22932026 22932073 -79471 - ACCORD2_LTR LTR Gypsy -167 48 1 1 759 557 61 48 48 chr2L 22932150 22932253 -79291 + DOC5_DM LINE Jockey 2995 3097 -1585 1 759 1183 32 0 0 chr2L 22932294 22932448 -79096 + DOC5_DM LINE Jockey 3103 3256 -1426 1 759 1441 50 159 0 chr2L 22932429 22932684 -78860 + DOC5_DM LINE Jockey 3450 3745 -937 1 759 5131 36 8 0 chr2L 22932682 22933345 -78199 + DOC5_DM LINE Jockey 4015 4682 0 1 759 252 135 26 39 chr2L 22933377 22933454 -78090 + PROTOP DNA P 621 697 -3783 1 759 288 218 168 0 chr2L 22933446 22933547 -77997 + PROTOP DNA P 1467 1584 -2896 1 759 1348 109 181 0 chr2L 22933546 22933784 -77760 + PROTOP DNA P 4192 4479 -1 1 759 928 119 62 0 chr2L 22933986 22934146 -77398 + DNAREP1_DM LINE Penelope 1 170 -424 1 759 1563 105 45 35 chr2L 22934151 22934437 -77107 + DM297_LTR LTR Gypsy 110 398 -16 1 759 1165 116 29 0 chr2L 22934482 22934654 -76890 - FW_DM LINE Jockey -777 3915 3739 1 759 2298 150 27 10 chr2L 22934653 22935057 -76487 - FW_DM LINE Jockey -1935 2757 2347 1 759 9295 14 2 0 chr2L 22935084 22936140 -75404 - DOC2_DM LINE Jockey 0 4793 3736 1 94 25277 20 30 9 chr2L 22936144 22939398 -72146 - DOC2_DM LINE Jockey -1428 3365 3 1 760 903 121 19 6 chr2L 22939407 22939565 -71979 + DM176_I LTR Gypsy 148 307 -6113 1 760 498 170 50 0 chr2L 22939560 22939660 -71884 + DM176_I LTR Gypsy 553 657 -5763 1 760 1181 135 219 35 chr2L 22939648 22939996 -71548 - FW_DM LINE Jockey -268 4424 4013 1 760 1178 145 0 0 chr2L 22940010 22940196 -71348 + DM176_I LTR Gypsy 605 790 -5630 1 760 4142 60 113 2 chr2L 22940182 22940766 -70778 + Baggins1 LINE LOA 4475 5123 -330 1 760 32 0 0 0 chr2L 22941284 22941316 -70228 + AT_rich Low_complexity Low_complexity 1 32 0 1 760 21 0 0 0 chr2L 22941345 22941366 -70178 + AT_rich Low_complexity Low_complexity 1 21 0 1 760 25 31 0 0 chr2L 22941853 22941885 -69659 + AT_rich Low_complexity Low_complexity 1 32 0 1 760 255 215 11 151 chr2L 22941942 22942035 -69509 + DM176_LTR LTR Gypsy 190 269 -238 1 760 273 191 59 0 chr2L 22942143 22942211 -69333 + DM176_LTR LTR Gypsy 295 366 -141 1 760 608 148 40 16 chr2L 22942228 22942352 -69192 + DMTOM1_LTR LTR Gypsy 284 410 0 1 760 409 100 14 28 chr2L 22942352 22942415 -69129 + DMTOM1_LTR LTR Gypsy 349 410 0 1 760 26 30 0 0 chr2L 22942829 22942862 -68682 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 34 55 0 0 chr2L 22942901 22942956 -68588 + AT_rich Low_complexity Low_complexity 1 55 0 1 760 539 275 176 7 chr2L 22943124 22943414 -68130 + Gypsy5_I LTR Gypsy 2145 2483 -4026 1 760 2661 291 38 20 chr2L 22943415 22944787 -66757 + ZAM_I LTR Gypsy 3197 4569 -1719 1 760 1075 261 17 17 chr2L 22944813 22945168 -66376 + ZAM_I LTR Gypsy 5187 5541 -1949 1 760 280 28 0 0 chr2L 22945894 22945930 -65614 + Baggins1 LINE LOA 5418 5453 0 1 760 587 87 24 12 chr2L 22945902 22946015 -65529 + PROTOP_A DNA P 712 796 -309 1 760 948 132 59 0 chr2L 22946043 22946195 -65349 + DM176_I LTR Gypsy 1579 1739 -4681 1 760 2777 47 9 0 chr2L 22946198 22946538 -65006 + DIVER2_LTR LTR Pao 43 385 0 1 760 8993 126 135 107 chr2L 22946538 22948915 -62629 + DIVER2_I LTR Pao 1 2442 -1705 1 760 3353 42 130 0 chr2L 22949773 22950228 -61316 + DIVER2_I LTR Pao 2428 2941 -1206 1 760 3417 44 0 0 chr2L 22950225 22950634 -60910 + DIVER2_I LTR Pao 3055 3463 -684 1 760 2510 3 42 0 chr2L 22950634 22950920 -60624 - Invader3_LTR LTR Gypsy 0 298 1 1 760 43639 2 9 0 chr2L 22950920 22951031 -60513 - Invader3_I LTR Gypsy 0 4888 4778 1 760 218 32 32 0 chr2L 22951031 22951062 -60482 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 760 43639 2 9 0 chr2L 22951062 22955795 -55749 - Invader3_I LTR Gypsy -111 4777 2 1 760 2533 0 42 0 chr2L 22955795 22956081 -55463 - Invader3_LTR LTR Gypsy 0 298 1 1 760 6060 17 0 0 chr2L 22956081 22956769 -54775 + DIVER2_I LTR Pao 3460 4147 0 1 760 3202 34 3 5 chr2L 22956769 22957155 -54389 + DIVER2_LTR LTR Pao 1 385 0 1 760 3778 80 35 9 chr2L 22957157 22957723 -53821 + DM176_I LTR Gypsy 2041 2621 -3799 1 760 1657 183 67 21 chr2L 22957717 22958249 -53295 + DM176_I LTR Gypsy 2380 3153 -3267 1 760 237 62 0 0 chr2L 22958246 22958278 -53266 + DM176_I LTR Gypsy 3346 3377 -3043 1 760 390 145 29 0 chr2L 22958299 22958368 -53176 + DM176_I LTR Gypsy 3450 3520 -2900 1 760 1365 147 226 40 chr2L 22958366 22958693 -52851 + DM176_I LTR Gypsy 4641 5028 -1392 1 760 418 87 0 0 chr2L 22958691 22958760 -52784 + DM297_I LTR Gypsy 5422 5490 -677 1 760 1304 103 79 0 chr2L 22959205 22959419 -52125 - PROTOP_B DNA P -793 360 130 1 760 490 48 0 0 chr2L 22959431 22959493 -52051 - PROTOP_B DNA P -1091 62 1 1 760 33 0 0 0 chr2L 22961256 22961289 -50255 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 366 156 798 18 chr2L 22962137 22962246 -49298 - PROTOP DNA P -66 4414 4220 1 760 26 30 0 0 chr2L 22962325 22962358 -49186 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 230 158 0 0 chr2L 22962363 22962401 -49143 - PROTOP DNA P -2882 1598 1561 1 760 48 85 0 0 chr2L 22962484 22962602 -48942 + AT_rich Low_complexity Low_complexity 1 118 0 1 760 393 198 204 115 chr2L 22962664 22962943 -48601 + Gypsy8_LTR LTR Gypsy 1 304 0 1 760 621 290 21 0 chr2L 22964010 22964196 -47348 - G5_DM LINE Jockey -3412 1444 1255 1 760 24 0 0 0 chr2L 22964509 22964533 -47011 + AT_rich Low_complexity Low_complexity 1 24 0 1 760 806 216 10 5 chr2L 22964705 22964900 -46644 + BS2 LINE Jockey 52 247 -4474 1 760 231 125 25 0 chr2L 22964963 22965003 -46541 + BS2 LINE Jockey 52 92 -4629 1 760 3492 256 48 15 chr2L 22965565 22966448 -45096 + G5A_DM LINE Jockey 1485 2396 -2460 1 760 1070 139 11 6 chr2L 22966415 22966589 -44955 + G5A_DM LINE Jockey 447 621 -2220 1 760 4773 108 50 10 chr2L 22966599 22967412 -44132 + G5A_DM LINE Jockey 1151 1864 -977 1 760 2939 52 37 3 chr2L 22967409 22967791 -43753 + G5A_DM LINE Jockey 2076 2470 -371 1 760 393 200 10 10 chr2L 22968087 22968188 -43356 + DNAREP1_DM LINE Penelope 210 310 -284 1 760 974 9 0 0 chr2L 22968449 22968556 -42988 - Invader4_LTR LTR Gypsy -239 107 1 1 760 2251 115 155 12 chr2L 22968591 22969018 -42526 + DNAREP1_DM LINE Penelope 117 594 0 1 760 26 0 0 0 chr2L 22969255 22969281 -42263 + AT_rich Low_complexity Low_complexity 1 26 0 1 760 1681 270 156 18 chr2L 22969394 22970059 -41485 + G5_DM LINE Jockey 3031 3787 -1069 1 760 826 325 71 13 chr2L 22970061 22970513 -41031 + G5A_DM LINE Jockey 1922 2399 -442 1 760 28 29 0 0 chr2L 22970790 22970825 -40719 + AT_rich Low_complexity Low_complexity 1 35 0 1 760 6495 73 128 4 chr2L 22970825 22972789 -38755 + Baggins1 LINE LOA 1 2209 -3244 1 760 1590 64 0 0 chr2L 22972786 22972990 -38554 + Baggins1 LINE LOA 4061 4264 -1189 1 760 2819 47 0 0 chr2L 22972979 22973320 -38224 + Baggins1 LINE LOA 4390 4730 -723 1 760 2663 52 0 6 chr2L 22973319 22973646 -37898 + Baggins1 LINE LOA 5017 5341 -112 1 760 895 127 71 12 chr2L 22973656 22973824 -37720 - DNAREP1_DM LINE Penelope -380 214 37 1 760 2426 177 81 14 chr2L 22973997 22974517 -37027 - FW_DM LINE Jockey -633 4059 3541 1 760 753 123 75 7 chr2L 22974596 22974743 -36801 - FW_DM LINE Jockey -1368 3324 3168 1 760 344 133 531 0 chr2L 22974739 22974852 -36692 - FW_DM LINE Jockey -1727 2965 2793 1 760 1459 133 151 43 chr2L 22974879 22975319 -36225 - DNAREP1_DM LINE Penelope -71 523 141 1 760 404 209 55 0 chr2L 22975901 22976011 -35533 + MDG1_I LTR Gypsy 1963 2078 -4518 1 760 225 164 182 0 chr2L 22976177 22976232 -35312 - FW_DM LINE Jockey -3652 1040 976 1 760 902 230 193 0 chr2L 22976358 22976632 -34912 + GTWIN_I LTR Gypsy 2280 2606 -3815 1 760 614 209 12 47 chr2L 22976633 22976804 -34740 + GTWIN_I LTR Gypsy 2764 2928 -3493 1 760 225 260 192 0 chr2L 22976856 22976960 -34584 + GTWIN_I LTR Gypsy 3179 3302 -3119 1 760 2924 261 61 4 chr2L 22977330 22978126 -33418 - Gypsy6_I LTR Gypsy -1694 5318 4477 1 760 229 152 22 0 chr2L 22978126 22978172 -33372 + ROOA_LTR LTR Pao 1 47 -339 1 760 3124 41 13 0 chr2L 22978158 22978552 -32992 + ROOA_I LTR Pao 255 653 -6196 1 760 6879 47 119 32 chr2L 22978550 22980081 -31463 + ROOA_I LTR Pao 964 2627 -4222 1 760 6033 53 32 1 chr2L 22980079 22980853 -30691 + ROOA_I LTR Pao 2982 3779 -3070 1 760 19225 91 32 31 chr2L 22980853 22983924 -27620 + ROOA_I LTR Pao 3673 6747 -102 1 760 8920 54 88 25 chr2L 22983924 22985181 -26363 - R1_DM LINE R1 0 5356 4021 1 760 3931 0 0 0 chr2L 22985271 22985699 -25845 - ROO_LTR LTR Pao 0 428 1 1 760 1682 204 35 29 chr2L 22985700 22986815 -24729 + SAR_DM Satellite Satellite 1 1121 -1045 1 760 1070 189 22 14 chr2L 22986826 22987593 -23951 + SAR_DM Satellite Satellite 1 772 -680 1 760 1199 173 30 20 chr2L 22987604 22989149 -22395 + SAR_DM Satellite Satellite 1 1560 -683 1 760 1164 177 26 9 chr2L 22989160 22990946 -20598 + SAR_DM Satellite Satellite 1 1816 -680 1 760 1127 177 30 8 chr2L 22990957 22991458 -20086 + SAR_DM Satellite Satellite 1 511 -680 1 760 1162 184 21 9 chr2L 22991469 22993263 -18281 + SAR_DM Satellite Satellite 1 1816 -680 1 760 1152 179 20 8 chr2L 22993274 22993780 -17764 + SAR_DM Satellite Satellite 1 511 -680 1 760 1172 161 32 16 chr2L 22993791 22994038 -17506 + SAR_DM Satellite Satellite 539 789 -683 1 760 1191 183 21 10 chr2L 22994049 22995846 -15698 + SAR_DM Satellite Satellite 1 1817 -680 1 760 1189 171 27 14 chr2L 22995857 22996362 -15182 + SAR_DM Satellite Satellite 1 511 -680 1 760 1164 181 25 8 chr2L 22996373 22997646 -13898 + SAR_DM Satellite Satellite 1 1294 -680 1 760 1164 179 24 10 chr2L 22997657 22998934 -12610 + SAR_DM Satellite Satellite 1 1294 -680 1 760 1198 168 20 10 chr2L 22998945 22999452 -12092 + SAR_DM Satellite Satellite 1 512 -680 1 760 1196 171 24 6 chr2L 22999463 22999969 -11575 + SAR_DM Satellite Satellite 1 514 -680 1 760 1232 183 17 9 chr2L 23000003 23000743 -10801 + SAR_DM Satellite Satellite 1 745 -680 1 760 582 181 0 0 chr2L 23000744 23000860 -10684 - ARS406_DM Unknown Unknown -237 116 1 1 760 1255 189 14 6 chr2L 23000757 23003077 -8467 + SAR_DM Satellite Satellite 1 2336 -680 1 760 1165 188 21 8 chr2L 23003088 23004367 -7177 + SAR_DM Satellite Satellite 1 1294 -680 1 760 841 175 0 0 chr2L 23004378 23004538 -7006 + SAR_DM Satellite Satellite 539 698 -774 1 760 2309 7 4 4 chr2L 23004545 23004821 -6723 - Copia_LTR LTR Copia 0 276 1 1 760 40842 2 0 1 chr2L 23004821 23009417 -2127 - Copia_I LTR Copia 0 4593 1 1 760 2279 7 4 7 chr2L 23009417 23009694 -1850 - Copia_LTR LTR Copia 0 276 1 1 760 1096 189 23 13 chr2L 23009699 23011074 -470 + SAR_DM Satellite Satellite 1 1388 -1040 1 760 1058 185 18 18 chr2L 23011085 23011525 -19 + SAR_DM Satellite Satellite 1 440 -680 1 585 1104 89 0 0 chr2RHet 14 194 -3288567 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 2 585 259 294 11 0 chr2RHet 214 306 -3288455 - Gypsy2_I LTR Gypsy -5352 783 691 2 585 1340 36 160 0 chr2RHet 379 598 -3288163 - DOC5_DM LINE Jockey -58 4624 4371 2 585 2976 71 79 68 chr2RHet 593 1140 -3287621 - DOC5_DM LINE Jockey -1153 3529 2977 2 585 5470 56 61 1 chr2RHet 1143 1947 -3286814 - DOC5_DM LINE Jockey -2008 2674 1823 2 585 39108 11 7 1 chr2RHet 1964 6628 -3282133 + FW_DM LINE Jockey 1 4689 -3 2 585 971 27 191 0 chr2RHet 6627 6841 -3281920 - DOC5_DM LINE Jockey -2775 1907 1653 2 585 23 68 0 0 chr2RHet 7145 7189 -3281572 + AT_rich Low_complexity Low_complexity 1 44 0 2 585 34 65 0 0 chr2RHet 7235 7297 -3281464 + AT_rich Low_complexity Low_complexity 1 62 0 2 585 2188 133 78 15 chr2RHet 7407 7818 -3280943 - Gypsy2_I LTR Gypsy -240 5895 5459 2 585 449 35 0 0 chr2RHet 7828 7886 -3280875 - Gypsy2_I LTR Gypsy -2151 3984 3927 2 585 253 139 0 0 chr2RHet 7882 7918 -3280843 - Gypsy2_I LTR Gypsy -2803 3332 3297 2 585 1745 209 60 2 chr2RHet 7943 8449 -3280312 - Gypsy2_I LTR Gypsy -2971 3164 2797 2 585 327 200 13 26 chr2RHet 8518 8595 -3280166 - Gypsy2_I LTR Gypsy -3714 2421 2346 2 585 1257 249 46 18 chr2RHet 8579 9007 -3279754 - Gypsy2_I LTR Gypsy -3983 2152 1814 2 585 468 309 23 5 chr2RHet 9009 9227 -3279534 - Gypsy6_I LTR Gypsy -4518 2494 2273 2 585 949 284 14 19 chr2RHet 9240 9725 -3279036 + QUASIMODO_I LTR Gypsy 5100 5582 -478 2 585 25 83 0 0 chr2RHet 9809 9869 -3278892 + AT_rich Low_complexity Low_complexity 1 60 0 2 585 1572 72 4 31 chr2RHet 10160 10419 -3278342 + I_DM LINE I 5213 5464 -767 2 585 655 266 60 13 chr2RHet 10434 10750 -3278011 - QUASIMODO_I LTR Gypsy -2600 3460 3130 2 585 3840 256 11 7 chr2RHet 10748 11914 -3276847 - IDEFIX_I LTR Gypsy -3013 2615 1445 2 585 311 221 26 26 chr2RHet 12147 12300 -3276461 - QUASIMODO_I LTR Gypsy -4336 1724 1529 2 585 36601 61 18 3 chr2RHet 12359 17644 -3271117 - I_DM LINE I -767 5464 99 2 585 563 285 24 21 chr2RHet 17678 17965 -3270796 - QUASIMODO_I LTR Gypsy -4569 1491 1204 2 585 795 326 29 18 chr2RHet 18132 18679 -3270082 - TV1I LTR Gypsy -4994 969 417 2 585 207 0 0 0 chr2RHet 18712 18735 -3270026 + (TTTTTA)n Simple_repeat Simple_repeat 1 23 0 2 585 1109 8 0 0 chr2RHet 19263 19392 -3269369 + Gypsy2_LTR LTR Gypsy 225 353 0 2 585 13574 101 23 15 chr2RHet 19392 23456 -3265305 + Gypsy2_I LTR Gypsy 1 4106 -2906 2 585 15930 62 11 21 chr2RHet 23483 25880 -3262881 + Gypsy2_I LTR Gypsy 4097 6889 -123 2 585 1030 16 0 0 chr2RHet 25877 25999 -3262762 + Gypsy2_LTR LTR Gypsy 232 353 0 2 585 469 63 0 0 chr2RHet 26001 26064 -3262697 - PROTOP DNA P -1187 3293 3231 2 585 6926 57 46 17 chr2RHet 26117 27136 -3261625 - PROTOP DNA P -1390 3090 2042 2 585 3318 83 112 2 chr2RHet 27155 27742 -3261019 - PROTOP DNA P -2646 1834 1183 2 585 5560 64 134 21 chr2RHet 27744 28696 -3260065 - PROTOP DNA P -3420 1060 1 2 585 376 278 94 6 chr2RHet 28724 28905 -3259856 + IDEFIX_I LTR Gypsy 853 1049 -4579 2 585 553 248 133 8 chr2RHet 28902 29158 -3259603 + IDEFIX_I LTR Gypsy 736 1023 -4605 2 585 1879 244 133 28 chr2RHet 29172 30164 -3258597 + IDEFIX_I LTR Gypsy 1074 2383 -3580 2 585 21 0 0 0 chr2RHet 30218 30239 -3258522 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 263 357 21 7 chr2RHet 30527 30671 -3258090 - MAX_I LTR Pao -3638 4276 4131 2 585 2349 0 0 4 chr2RHet 30696 30972 -3257789 + BURDOCK_LTR LTR Gypsy 1 275 0 2 585 50762 3 0 1 chr2RHet 30972 36834 -3251927 + BURDOCK_I LTR Gypsy 1 5860 0 2 585 2349 0 0 4 chr2RHet 36835 37111 -3251650 + BURDOCK_LTR LTR Gypsy 1 275 0 2 585 228 279 19 19 chr2RHet 37846 37952 -3250809 + Copia2_I LTR Copia 591 696 -3466 2 585 551 283 103 65 chr2RHet 38231 38756 -3250005 + Copia2_I LTR Copia 1037 1581 -2581 2 585 1240 313 8 10 chr2RHet 39097 39617 -3249144 + Copia2_I LTR Copia 2599 3117 -1045 2 585 1216 300 37 6 chr2RHet 39690 40200 -3248561 + Copia2_I LTR Copia 3254 3779 -383 2 585 463 335 34 12 chr2RHet 41698 42018 -3246743 - MAX_I LTR Pao -1178 6736 6410 2 585 274 277 19 39 chr2RHet 42046 42200 -3246561 - MAX_I LTR Pao -2824 5090 4940 2 585 962 157 122 30 chr2RHet 42410 42640 -3246121 + Gypsy12A_LTR LTR Gypsy 1 251 -2029 2 585 250 125 0 0 chr2RHet 42624 42664 -3246097 + Gypsy12_LTR LTR Gypsy 1957 1996 -340 2 585 1294 129 9 9 chr2RHet 42666 42877 -3245884 + Gypsy12_I LTR Gypsy 5096 5306 -240 2 585 701 144 0 8 chr2RHet 42869 42995 -3245766 + Gypsy12A_LTR LTR Gypsy 118 242 -2094 2 585 709 176 0 15 chr2RHet 42980 43113 -3245648 + Gypsy12A_LTR LTR Gypsy 1886 2016 -264 2 585 456 78 165 11 chr2RHet 43387 43478 -3245283 + DMRP1 Unknown Unknown 26 130 -216 2 585 33 0 0 0 chr2RHet 43663 43696 -3245065 + AT_rich Low_complexity Low_complexity 1 33 0 2 585 789 114 30 0 chr2RHet 43869 44000 -3244761 + DNAREP1_DM LINE Penelope 9 143 -451 2 585 545 173 117 25 chr2RHet 44046 44236 -3244525 + DNAREP1_DM LINE Penelope 117 331 -263 2 585 277 244 0 0 chr2RHet 44486 44568 -3244193 + DNAREP1_DM LINE Penelope 126 207 -387 2 585 3501 7 15 64 chr2RHet 44819 45285 -3243476 + MICROPIA_LTR LTR Gypsy 1 443 -33 2 585 839 205 149 51 chr2RHet 45312 45707 -3243054 + Gypsy_LTR LTR Gypsy 29 462 -20 2 585 358 226 74 74 chr2RHet 45798 46013 -3242748 + Gypsy_I LTR Gypsy 63 277 -6230 2 585 1967 76 86 0 chr2RHet 46038 46342 -3242419 - BS2 LINE Jockey 0 4721 4392 2 585 19133 172 114 10 chr2RHet 46387 50391 -3238370 + Gypsy_I LTR Gypsy 452 4872 -1635 2 585 310 203 0 0 chr2RHet 50396 50465 -3238296 + Gypsy_I LTR Gypsy 5462 5530 -977 2 585 745 231 0 0 chr2RHet 50464 50637 -3238124 + Gypsy_I LTR Gypsy 6332 6504 -3 2 585 1140 232 48 48 chr2RHet 50670 51104 -3237657 + Gypsy_LTR LTR Gypsy 29 462 -20 2 585 222 135 19 37 chr2RHet 51187 51241 -3237520 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 2 585 2968 98 73 6 chr2RHet 52522 53056 -3235705 - DNAREP1_DM LINE Penelope -24 570 1 2 585 35 54 0 0 chr2RHet 53628 53684 -3235077 + AT_rich Low_complexity Low_complexity 1 56 0 2 585 27 62 0 0 chr2RHet 54332 54380 -3234381 + AT_rich Low_complexity Low_complexity 1 48 0 2 585 556 233 131 11 chr2RHet 54440 54631 -3234130 - DNAREP1_DM LINE Penelope -65 529 316 2 585 24 0 0 0 chr2RHet 54746 54770 -3233991 + AT_rich Low_complexity Low_complexity 1 24 0 2 585 1520 147 113 50 chr2RHet 54825 55268 -3233493 + DNAREP1_DM LINE Penelope 1 471 -123 2 585 1404 164 137 44 chr2RHet 55269 55657 -3233104 + DNAREP1_DM LINE Penelope 137 560 -34 2 585 21 36 0 0 chr2RHet 57014 57042 -3231719 + AT_rich Low_complexity Low_complexity 1 28 0 2 585 344 200 62 10 chr2RHet 57043 57139 -3231622 + DNAREP1_DM LINE Penelope 79 179 -415 2 585 394 109 0 0 chr2RHet 57595 57650 -3231111 - DNAREP1_DM LINE Penelope -539 55 1 2 585 766 219 21 5 chr2RHet 57792 57985 -3230776 + DNAREP1_DM LINE Penelope 117 312 -282 2 585 409 362 20 5 chr2RHet 58891 59091 -3229670 + HMSBEAGLE_I LTR Gypsy 1685 1887 -4642 2 585 238 286 0 0 chr2RHet 59154 59224 -3229537 + HMSBEAGLE_I LTR Gypsy 2006 2075 -4454 2 585 249 278 0 14 chr2RHet 59458 59531 -3229230 + HMSBEAGLE_I LTR Gypsy 2372 2443 -4086 2 585 264 306 40 40 chr2RHet 60790 60940 -3227821 - NOMAD_I LTR Gypsy -3247 3325 3176 2 585 22 56 0 0 chr2RHet 63000 63036 -3225725 + AT_rich Low_complexity Low_complexity 1 36 0 2 585 29 28 0 0 chr2RHet 63160 63196 -3225565 + AT_rich Low_complexity Low_complexity 1 36 0 2 585 269 261 69 48 chr2RHet 63936 64081 -3224680 + HMSBEAGLE_I LTR Gypsy 2646 2793 -3736 2 585 264 306 40 40 chr2RHet 64281 64431 -3224330 - NOMAD_I LTR Gypsy -3247 3325 3176 2 585 23 54 0 0 chr2RHet 66491 66528 -3222233 + AT_rich Low_complexity Low_complexity 1 37 0 2 585 29 28 0 0 chr2RHet 66652 66688 -3222073 + AT_rich Low_complexity Low_complexity 1 36 0 2 585 269 261 69 48 chr2RHet 67428 67573 -3221188 + HMSBEAGLE_I LTR Gypsy 2646 2793 -3736 2 585 24 0 0 0 chr2RHet 67769 67793 -3220968 + AT_rich Low_complexity Low_complexity 1 24 0 2 585 272 232 21 21 chr2RHet 67978 68075 -3220686 + NOMAD_I LTR Gypsy 2954 3050 -3522 2 585 1995 356 30 28 chr2RHet 68102 70339 -3218422 + HMSBEAGLE_I LTR Gypsy 2530 5743 -786 2 585 2943 124 150 0 chr2RHet 70801 71315 -3217446 + DMCR1A LINE CR1 629 1219 -3251 2 585 628 151 0 28 chr2RHet 71311 71420 -3217341 + DMCR1A LINE CR1 1572 1677 -2793 2 585 2751 162 50 22 chr2RHet 71466 72002 -3216759 + DMCR1A LINE CR1 1762 2312 -2158 2 585 1049 160 112 3 chr2RHet 72013 72359 -3216402 + DMCR1A LINE CR1 2389 2772 -1698 2 585 1104 109 219 0 chr2RHet 72378 72697 -3216064 + DMCR1A LINE CR1 2914 3302 -1168 2 585 2162 156 93 9 chr2RHet 72720 73141 -3215620 + DMCR1A LINE CR1 3359 3814 -656 2 585 867 149 25 0 chr2RHet 73190 73351 -3215410 + DMCR1A LINE CR1 4138 4302 -168 2 585 330 200 0 0 chr2RHet 73640 73700 -3215061 + DMCR1A LINE CR1 4409 4468 -2 2 585 3652 53 141 13 chr2RHet 73797 74349 -3214412 + PROTOP DNA P 1 623 -3857 2 585 5517 76 64 26 chr2RHet 74354 75202 -3213559 + PROTOP DNA P 840 1719 -2761 2 585 3638 65 33 0 chr2RHet 75210 75730 -3213031 + PROTOP DNA P 3332 3868 -612 2 585 275 0 29 0 chr2RHet 75730 75765 -3212996 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2 585 2218 78 85 6 chr2RHet 75765 76250 -3212511 + PROTOP_A DNA P 683 1105 0 2 585 525 196 131 25 chr2RHet 77119 77329 -3211432 - DNAREP1_DM LINE Penelope -241 353 5 2 585 180 111 0 0 chr2RHet 77334 77361 -3211400 + (TATG)n Simple_repeat Simple_repeat 2 28 0 2 585 204 135 0 0 chr2RHet 77730 77767 -3210994 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 585 23 54 0 0 chr2RHet 78117 78154 -3210607 + AT_rich Low_complexity Low_complexity 1 37 0 2 585 21 82 0 0 chr2RHet 78174 78223 -3210538 + AT_rich Low_complexity Low_complexity 1 49 0 2 585 23 0 0 0 chr2RHet 78341 78364 -3210397 + AT_rich Low_complexity Low_complexity 1 23 0 2 585 22 35 0 0 chr2RHet 78517 78546 -3210215 + AT_rich Low_complexity Low_complexity 1 29 0 2 585 27 73 0 0 chr2RHet 78813 78868 -3209893 + AT_rich Low_complexity Low_complexity 1 55 0 2 585 197 41 19 93 chr2RHet 79493 79547 -3209214 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2 585 1590 185 18 12 chr2RHet 79681 80010 -3208751 + Gypsy2_LTR LTR Gypsy 1 331 -22 2 585 28 0 0 0 chr2RHet 80576 80604 -3208157 + AT_rich Low_complexity Low_complexity 1 28 0 2 585 203 312 0 0 chr2RHet 81102 81211 -3207550 + A-rich Low_complexity Low_complexity 1 109 0 2 585 339 105 0 0 chr2RHet 81505 81562 -3207199 + (TAA)n Simple_repeat Simple_repeat 3 59 0 2 585 1974 88 77 3 chr2RHet 81564 81862 -3206899 + MDG1_LTR LTR Gypsy 94 413 -29 2 585 17927 48 20 33 chr2RHet 81914 84373 -3204388 + MDG1_I LTR Gypsy 73 2499 -4097 2 585 16868 27 2 1 chr2RHet 84367 86416 -3202345 + MDG1_I LTR Gypsy 4245 6296 -300 2 585 736 89 8 0 chr2RHet 86414 86538 -3202223 + MDG1_I LTR Gypsy 6472 6596 0 2 585 372 88 0 0 chr2RHet 86554 86611 -3202150 + (TAA)n Simple_repeat Simple_repeat 3 59 0 2 585 32 0 0 0 chr2RHet 86637 86669 -3202092 + AT_rich Low_complexity Low_complexity 1 32 0 2 585 68 34 0 0 chr2RHet 86705 86794 -3201967 + AT_rich Low_complexity Low_complexity 1 89 0 2 585 460 349 47 22 chr2RHet 87069 87602 -3201159 + Gypsy5_I LTR Gypsy 495 1040 -5469 2 585 517 266 126 73 chr2RHet 87878 88709 -3200052 + Gypsy5_I LTR Gypsy 4746 5620 -889 2 585 313 196 71 71 chr2RHet 89483 89582 -3199179 + Gypsy5_I LTR Gypsy 6411 6509 0 2 585 1235 213 130 78 chr2RHet 90206 90691 -3198070 + Gypsy2_I LTR Gypsy 203 712 -5423 2 585 3297 314 75 44 chr2RHet 93104 95688 -3193073 + Gypsy5_I LTR Gypsy 2223 4886 -1623 2 585 25 0 0 0 chr2RHet 96002 96027 -3192734 + AT_rich Low_complexity Low_complexity 1 25 0 2 585 18391 35 73 2 chr2RHet 96264 98579 -3190182 - DMCR1A LINE CR1 -1 4469 1989 2 585 15705 33 5 2 chr2RHet 98578 100447 -3188314 - DMCR1A LINE CR1 -2586 1884 11 2 585 2815 179 33 0 chr2RHet 100837 101356 -3187405 + Gypsy2_I LTR Gypsy 725 1260 -4875 2 585 3990 98 85 2 chr2RHet 101364 101964 -3186797 + Gypsy2_I LTR Gypsy 3464 4113 -2022 2 585 1713 118 64 4 chr2RHet 101983 102263 -3186498 + Gypsy2_I LTR Gypsy 5603 5899 -236 2 585 1243 181 29 18 chr2RHet 102281 102557 -3186204 + Gypsy2_LTR LTR Gypsy 59 337 -16 2 585 21 0 0 0 chr2RHet 104088 104109 -3184652 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 27 62 0 0 chr2RHet 104558 104606 -3184155 + AT_rich Low_complexity Low_complexity 1 48 0 2 585 24 111 0 0 chr2RHet 105130 105238 -3183523 + AT_rich Low_complexity Low_complexity 1 108 0 2 585 4080 34 12 0 chr2RHet 105263 105765 -3182996 + PROTOP_A DNA P 598 1105 0 2 585 2038 46 0 0 chr2RHet 105765 106022 -3182739 - DOC5_DM LINE Jockey -4222 460 204 2 585 423 254 0 33 chr2RHet 106015 106137 -3182624 + Gypsy8_I LTR Gypsy 3194 3311 -1036 2 585 1377 191 134 56 chr2RHet 106917 107327 -3181434 + DNAREP1_DM LINE Penelope 141 582 -12 2 585 568 184 0 9 chr2RHet 107327 107442 -3181319 + FW_DM LINE Jockey 232 345 -4347 2 585 281 231 92 0 chr2RHet 107448 107513 -3181248 + FW_DM LINE Jockey 989 1059 -3633 2 585 3880 51 172 8 chr2RHet 107528 108190 -3180571 - DOC5_DM LINE Jockey 0 4682 3912 2 585 203 247 0 64 chr2RHet 109241 109319 -3179442 + A-rich Low_complexity Low_complexity 1 73 0 2 585 31359 4 0 2 chr2RHet 109402 114104 -3174657 - DOC LINE Jockey -5 4720 32 2 585 36 53 0 0 chr2RHet 114147 114204 -3174557 + AT_rich Low_complexity Low_complexity 1 57 0 2 585 21283 58 14 7 chr2RHet 114243 117124 -3171637 + I_DM LINE I 83 2983 -3248 2 585 5847 64 12 1 chr2RHet 117794 118604 -3170157 + I_DM LINE I 4689 5507 -724 2 585 326 285 47 27 chr2RHet 118817 119015 -3169746 + ACCORD2_I LTR Gypsy 2429 2537 -4675 2 585 2062 293 90 34 chr2RHet 119291 120483 -3168278 + ZAM_I LTR Gypsy 2377 4561 -2929 2 585 634 218 112 58 chr2RHet 120798 121076 -3167685 + ZAM_I LTR Gypsy 5108 5400 -2090 2 585 310 157 0 0 chr2RHet 121421 121472 -3167289 - Gypsy2_I LTR Gypsy -119 6016 5966 2 585 5070 129 43 8 chr2RHet 121503 122301 -3166460 - Gypsy2_I LTR Gypsy -240 5895 5070 2 585 1127 110 200 0 chr2RHet 122295 122592 -3166169 - Gypsy2_I LTR Gypsy -1375 4760 4404 2 585 8120 168 96 32 chr2RHet 122593 124196 -3164565 - Gypsy2_I LTR Gypsy -1836 4299 2595 2 585 2044 216 17 15 chr2RHet 124246 124753 -3164008 - Gypsy2_I LTR Gypsy -3714 2421 1839 2 585 475 302 12 0 chr2RHet 124749 124918 -3163843 - Gypsy6_I LTR Gypsy -4593 2419 2249 2 585 329 291 51 29 chr2RHet 124929 125067 -3163694 - Gypsy2_I LTR Gypsy -4913 1222 1082 2 585 386 267 9 0 chr2RHet 125216 125321 -3163440 - Gypsy2_I LTR Gypsy -5327 808 703 2 585 4157 62 87 0 chr2RHet 125460 126091 -3162670 - DOC5_DM LINE Jockey 0 4682 3997 2 585 208 0 62 0 chr2RHet 126093 126125 -3162636 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2 585 1942 228 45 101 chr2RHet 126244 126977 -3161784 + TIRANT_I LTR Gypsy 437 1336 -6356 2 585 243 287 8 17 chr2RHet 127075 127192 -3161569 + (CATA)n Simple_repeat Simple_repeat 2 117 0 2 73 8379 274 63 59 chr2RHet 127202 131941 -3156820 - TABOR_I LTR Gypsy -1538 4992 235 2 586 314 96 0 37 chr2RHet 132114 132168 -3156593 - Stalker2_I LTR Gypsy -7350 52 1 2 586 1858 103 62 103 chr2RHet 132168 132556 -3156205 - Stalker3_LTR LTR Gypsy 0 372 1 2 586 351 0 0 0 chr2RHet 132556 132597 -3156164 - G4_DM LINE Jockey -303 3553 3513 2 586 353 200 47 0 chr2RHet 132598 132683 -3156078 + DMCR1A LINE CR1 3246 3334 -1136 2 586 1719 146 233 11 chr2RHet 132723 133375 -3155386 + DMCR1A LINE CR1 3589 4385 -85 2 586 180 0 0 0 chr2RHet 133375 133395 -3155366 + (GGTTG)n Simple_repeat Simple_repeat 5 24 0 2 586 285 117 0 172 chr2RHet 134017 134110 -3154651 + NOMAD_I LTR Gypsy 1 77 -6495 2 586 534 131 179 55 chr2RHet 134215 134360 -3154401 + NOMAD_I LTR Gypsy 91 253 -6319 2 586 35 54 0 0 chr2RHet 135118 135174 -3153587 + AT_rich Low_complexity Low_complexity 1 56 0 2 586 2195 153 122 2 chr2RHet 135563 135981 -3152780 + NOMAD_I LTR Gypsy 1711 2178 -4394 2 586 349 174 265 0 chr2RHet 135996 136094 -3152667 - Gypsy8_I LTR Gypsy -4222 125 2 2 586 1367 125 4 106 chr2RHet 136094 136359 -3152402 - Gypsy8_LTR LTR Gypsy -82 222 8 2 586 778 166 5 69 chr2RHet 136359 136547 -3152214 - Gypsy8_I LTR Gypsy -2 4345 4170 2 586 1759 173 41 64 chr2RHet 136618 137105 -3151656 - Gypsy8_I LTR Gypsy -164 4183 3708 2 586 328 298 15 15 chr2RHet 137215 137348 -3151413 + (CGG)n Simple_repeat Simple_repeat 2 134 0 2 586 12555 45 6 5 chr2RHet 137349 138879 -3149882 + FW2_DM LINE Jockey 493 2024 -1937 2 586 7218 58 49 11 chr2RHet 138941 139906 -3148855 + DOC3_DM LINE Jockey 1 1001 -3739 2 586 573 28 238 42 chr2RHet 139906 140034 -3148727 + DOC3_DM LINE Jockey 1184 1339 -3401 2 586 314 85 0 21 chr2RHet 140034 140082 -3148679 - ACCORD2_LTR LTR Gypsy 0 215 169 2 586 242 161 0 221 chr2RHet 140099 140203 -3148558 - ACCORD2_LTR LTR Gypsy -134 81 1 2 586 1979 68 0 4 chr2RHet 140207 140473 -3148288 - ACCORD2_I LTR Gypsy -23 7189 6925 2 586 512 98 54 11 chr2RHet 140510 140603 -3148158 - ACCORD2_I LTR Gypsy -584 6628 6532 2 586 15753 69 18 4 chr2RHet 140570 142643 -3146118 - ACCORD2_I LTR Gypsy -865 6347 4245 2 586 7429 65 49 8 chr2RHet 142640 144326 -3144435 - ACCORD2_I LTR Gypsy -3095 4117 2317 2 586 3152 37 21 0 chr2RHet 144324 144698 -3144063 - DMRT1B LINE R1 -1 5182 4801 2 586 26454 40 30 3 chr2RHet 144697 147796 -3140965 - DMRT1B LINE R1 -1855 3328 163 2 586 180 0 0 0 chr2RHet 147796 147816 -3140945 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2 586 26454 185 35 32 chr2RHet 147816 148128 -3140633 - DMRT1B LINE R1 -4847 336 2 2 586 3177 82 15 15 chr2RHet 148220 148690 -3140071 - ACCORD2_I LTR Gypsy -4882 2330 1861 2 586 2572 101 13 73 chr2RHet 148697 149218 -3139543 - ACCORD2_I LTR Gypsy -5184 2028 1539 2 586 1242 98 0 6 chr2RHet 149296 149471 -3139290 - ACCORD2_I LTR Gypsy -5845 1367 1194 2 586 1349 72 242 42 chr2RHet 149478 150072 -3138689 - ACCORD2_I LTR Gypsy -6387 825 28 2 586 444 112 84 63 chr2RHet 150074 150169 -3138592 - ACCORD2_LTR LTR Gypsy 0 215 119 2 586 3800 71 98 0 chr2RHet 150204 150736 -3138025 + DOC3_DM LINE Jockey 1327 1910 -2830 2 586 1073 58 0 14 chr2RHet 150743 150882 -3137879 + DOC3_DM LINE Jockey 2033 2169 -2571 2 586 3249 26 31 3 chr2RHet 150862 151243 -3137518 + DOC3_DM LINE Jockey 2343 2734 -2006 2 586 9516 90 33 10 chr2RHet 151239 153410 -3135351 + DOC3_DM LINE Jockey 2479 4740 0 2 586 2512 163 23 12 chr2RHet 153438 153989 -3134772 - Gypsy8_I LTR Gypsy -3311 1036 694 2 586 1788 90 76 53 chr2RHet 153987 154291 -3134470 - Gypsy8_I LTR Gypsy -3771 576 266 2 586 814 324 29 31 chr2RHet 154359 154837 -3133924 - OSVALDO_I LTR Gypsy -5727 926 450 2 586 375 222 154 56 chr2RHet 155728 155871 -3132890 - Gypsy8_I LTR Gypsy -4118 229 73 2 586 233 83 28 0 chr2RHet 155878 155914 -3132847 + NOMAD_I LTR Gypsy 3082 3118 -3454 2 586 7447 114 4 10 chr2RHet 155910 156948 -3131813 + NOMAD_I LTR Gypsy 3438 4469 -2103 2 586 9201 38 11 0 chr2RHet 156945 158022 -3130739 - Baggins1 LINE LOA -1 5452 4364 2 586 3562 39 0 0 chr2RHet 158024 158437 -3130324 - Baggins1 LINE LOA -987 4466 4054 2 586 7143 48 8 6 chr2RHet 158435 159303 -3129458 - Baggins1 LINE LOA -1684 3769 2900 2 586 8391 33 65 0 chr2RHet 159304 161104 -3127657 - Baggins1 LINE LOA -2746 2707 791 2 586 2976 121 7 0 chr2RHet 161097 161517 -3127244 + NOMAD_I LTR Gypsy 4454 4876 -1696 2 586 1258 270 63 12 chr2RHet 161511 161949 -3126812 - BS LINE Jockey -1320 3806 3370 2 586 3371 233 4 6 chr2RHet 161947 162736 -3126025 - TOM_I LTR Gypsy -3382 2730 1944 2 586 209 57 29 0 chr2RHet 162774 162809 -3125952 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 2 586 3205 68 14 2 chr2RHet 162816 163231 -3125530 - Gypsy6A_LTR LTR Gypsy 0 420 1 2 586 1371 293 38 20 chr2RHet 163233 163683 -3125078 - Gypsy6_I LTR Gypsy 0 7012 6555 2 586 512 222 25 56 chr2RHet 163775 163937 -3124824 - Gypsy8_I LTR Gypsy -4118 229 73 2 586 233 83 28 0 chr2RHet 163944 163980 -3124781 + NOMAD_I LTR Gypsy 3082 3118 -3454 2 586 7410 111 6 14 chr2RHet 163976 165016 -3123745 + NOMAD_I LTR Gypsy 3438 4469 -2103 2 586 13890 39 11 0 chr2RHet 165013 166643 -3122118 - Baggins1 LINE LOA -1 5452 3805 2 586 2246 55 0 0 chr2RHet 166643 166915 -3121846 - PROTOP DNA P 0 4480 4209 2 586 2950 37 13 8 chr2RHet 166915 167299 -3121462 - PROTOP DNA P -506 3974 3589 2 586 12480 36 16 10 chr2RHet 167279 168871 -3119890 - PROTOP DNA P -2878 1602 1 2 586 6985 54 25 6 chr2RHet 168871 169766 -3118995 - Baggins1 LINE LOA -1642 3811 2900 2 586 15120 38 42 0 chr2RHet 169767 171606 -3117155 - Baggins1 LINE LOA -2746 2707 791 2 586 2897 118 14 0 chr2RHet 171599 172016 -3116745 + NOMAD_I LTR Gypsy 4454 4876 -1696 2 586 1459 280 13 11 chr2RHet 172010 172469 -3116292 - BS LINE Jockey -1297 3829 3370 2 586 3236 234 21 1 chr2RHet 172467 173239 -3115522 - TOM_I LTR Gypsy -3382 2730 1944 2 586 46 0 0 0 chr2RHet 173275 173321 -3115440 + AT_rich Low_complexity Low_complexity 1 46 0 2 586 3113 68 14 2 chr2RHet 173321 173736 -3115025 - Gypsy6A_LTR LTR Gypsy 0 420 1 2 586 850 321 74 3 chr2RHet 173738 174047 -3114714 - Gypsy6_I LTR Gypsy 0 7012 6682 2 586 6561 109 35 9 chr2RHet 174049 174998 -3113763 + NOMAD_I LTR Gypsy 3497 4469 -2103 2 586 12544 39 47 0 chr2RHet 174995 176543 -3112218 - Baggins1 LINE LOA -1 5452 3832 2 586 2985 310 30 46 chr2RHet 176568 178104 -3110657 + MICROPIA_I LTR Gypsy 997 2507 -1969 2 586 1880 302 46 25 chr2RHet 178141 179039 -3109722 + MICROPIA_I LTR Gypsy 3064 3980 -496 2 586 2670 104 65 14 chr2RHet 179396 179842 -3108919 + Invader1_I LTR Gypsy 2718 3186 0 2 586 1327 135 67 41 chr2RHet 179842 180112 -3108649 + Invader1_LTR LTR Gypsy 1 277 -146 2 586 3588 331 44 40 chr2RHet 180295 182993 -3105768 + Copia2_I LTR Copia 1329 4035 -127 2 586 263 312 25 25 chr2RHet 183268 183426 -3105335 + Invader6_I LTR Gypsy 1052 1209 -2890 2 586 2457 292 25 54 chr2RHet 183466 184557 -3104204 + Invader6_I LTR Gypsy 1492 2550 -1549 2 586 1901 301 46 25 chr2RHet 184594 185492 -3103269 + MICROPIA_I LTR Gypsy 3064 3980 -496 2 586 2670 104 65 14 chr2RHet 185849 186295 -3102466 + Invader1_I LTR Gypsy 2718 3186 0 2 586 1299 134 68 42 chr2RHet 186295 186560 -3102201 + Invader1_LTR LTR Gypsy 1 272 -151 2 586 3596 332 44 40 chr2RHet 186756 189457 -3099304 + Copia2_I LTR Copia 1329 4038 -124 2 586 2721 313 24 60 chr2RHet 189728 191251 -3097510 + MICROPIA_I LTR Gypsy 1039 2507 -1969 2 586 1899 303 45 24 chr2RHet 191276 192186 -3096575 + MICROPIA_I LTR Gypsy 3052 3980 -496 2 586 815 55 28 0 chr2RHet 192543 192652 -3096109 + Invader1_I LTR Gypsy 2718 2829 -357 2 586 9619 14 0 0 chr2RHet 192652 193757 -3095004 - PROTOP_A DNA P 0 1105 1 2 586 2022 122 64 3 chr2RHet 193757 194100 -3094661 + Invader1_I LTR Gypsy 2823 3186 0 2 586 2382 140 21 26 chr2RHet 194100 194525 -3094236 + Invader1_LTR LTR Gypsy 1 423 0 2 586 10093 65 23 0 chr2RHet 194525 195833 -3092928 - Baggins1 LINE LOA -3449 2004 667 2 586 1320 63 35 0 chr2RHet 195831 196005 -3092756 - Baggins1 LINE LOA -5269 184 5 2 586 718 116 495 34 chr2RHet 196156 196360 -3092401 + DNAREP1_DM LINE Penelope 269 566 -28 2 586 255 323 11 0 chr2RHet 196382 196475 -3092286 - Gypsy12_I LTR Gypsy -1067 4479 4386 2 586 382 294 9 0 chr2RHet 196580 196689 -3092072 - Gypsy12_I LTR Gypsy -1335 4211 4102 2 586 246 238 0 0 chr2RHet 196996 197059 -3091702 - TC1-2_DM DNA Tc1 -794 850 788 2 586 26 0 0 0 chr2RHet 198165 198191 -3090570 + AT_rich Low_complexity Low_complexity 1 26 0 2 586 33 0 0 0 chr2RHet 198563 198596 -3090165 + AT_rich Low_complexity Low_complexity 1 33 0 2 586 271 83 264 0 chr2RHet 199840 199912 -3088849 + DNAREP1_DM LINE Penelope 245 335 -259 2 586 35 63 0 0 chr2RHet 199924 199987 -3088774 + AT_rich Low_complexity Low_complexity 1 63 0 2 586 21 57 0 0 chr2RHet 199999 200034 -3088727 + AT_rich Low_complexity Low_complexity 1 35 0 2 586 511 32 0 0 chr2RHet 200561 200623 -3088138 + PROTOP_B DNA P 1092 1153 0 2 586 1257 136 119 4 chr2RHet 200625 200861 -3087900 + DMCR1A LINE CR1 3665 3927 -543 2 586 263 229 0 0 chr2RHet 201052 201113 -3087648 - ROO_I LTR Pao -4598 3658 3598 2 586 563 70 163 0 chr2RHet 201123 201209 -3087552 - DNAREP1_DM LINE Penelope -31 563 464 2 586 203 173 19 37 chr2RHet 201218 201272 -3087489 + T-rich Low_complexity Low_complexity 1 53 0 2 586 27 29 0 0 chr2RHet 201431 201465 -3087296 + AT_rich Low_complexity Low_complexity 1 34 0 2 586 6088 19 121 1 chr2RHet 201929 202738 -3086023 + FB4_DM DNA Tc1 1 906 -3183 2 586 3310 14 56 2 chr2RHet 202747 203161 -3085600 - FB4_DM DNA Tc1 -3653 436 1 2 586 9548 38 78 1 chr2RHet 203691 204901 -3083860 - TC1_DM DNA Tc1 0 1666 363 2 586 8211 28 40 48 chr2RHet 204901 206016 -3082745 - PROTOP_A DNA P 0 1105 1 2 586 2822 33 16 8 chr2RHet 206016 206381 -3082380 - TC1_DM DNA Tc1 -1298 368 1 2 586 26 64 0 0 chr2RHet 206590 206637 -3082124 + AT_rich Low_complexity Low_complexity 1 47 0 2 586 222 196 36 0 chr2RHet 208068 208124 -3080637 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 586 295 258 30 30 chr2RHet 208237 208337 -3080424 + DIVER2_I LTR Pao 294 393 -3754 2 586 434 250 0 0 chr2RHet 208632 208720 -3080041 + DIVER2_I LTR Pao 443 530 -3617 2 586 738 299 64 20 chr2RHet 208733 209078 -3079683 + DIVER2_I LTR Pao 598 957 -3190 2 586 42649 1 0 0 chr2RHet 209120 213839 -3074922 + DOC LINE Jockey 8 4725 0 2 586 393 320 0 0 chr2RHet 213912 214037 -3074724 + DIVER2_I LTR Pao 1420 1544 -2603 2 586 412 248 10 0 chr2RHet 214102 214203 -3074558 + DIVER2_I LTR Pao 2979 3080 -1067 2 586 825 260 121 0 chr2RHet 214237 214468 -3074293 + DIVER2_I LTR Pao 3187 3445 -702 2 586 897 300 25 22 chr2RHet 214646 214966 -3073795 + DIVER2_I LTR Pao 3704 4024 -123 2 586 7285 44 92 7 chr2RHet 214974 215996 -3072765 - PROTOP_B DNA P 0 1153 45 2 586 373 293 0 0 chr2RHet 215999 216098 -3072663 + DIVER2_I LTR Pao 4047 4145 -2 2 586 410 233 8 49 chr2RHet 216330 216452 -3072309 + M4DM DNA Transib 278 394 -1041 2 586 24 53 0 0 chr2RHet 217124 217162 -3071599 + AT_rich Low_complexity Low_complexity 1 38 0 2 586 1468 142 36 34 chr2RHet 218206 218675 -3070086 - DNAREP1_DM LINE Penelope 0 594 117 2 586 249 336 67 13 chr2RHet 219427 219665 -3069096 - HOBO DNA hAT -683 2333 2083 2 586 1438 29 12 0 chr2RHet 219781 219952 -3068809 - PROTOP DNA P 0 4480 4308 2 586 1438 336 30 40 chr2RHet 220040 221325 -3067436 + HOBO DNA hAT 533 1803 -1213 2 586 8884 28 18 1 chr2RHet 221429 222516 -3066245 + PROTOP_A DNA P 1 1105 0 2 586 337 93 19 0 chr2RHet 222516 222569 -3066192 - DMCR1A LINE CR1 -1337 3133 3080 2 586 1949 148 141 17 chr2RHet 222553 223021 -3065740 - DMCR1A LINE CR1 -1642 2828 2303 2 586 27 29 0 0 chr2RHet 223021 223055 -3065706 + AT_rich Low_complexity Low_complexity 1 34 0 2 586 538 142 165 8 chr2RHet 223163 223284 -3065477 + DNAREP1_DM LINE Penelope 1 140 -454 2 586 656 54 11 0 chr2RHet 223330 223422 -3065339 + DOC4_DM LINE Jockey 829 921 -1870 2 586 2180 54 3 10 chr2RHet 223624 223925 -3064836 + DOC4_DM LINE Jockey 916 1214 -1577 2 586 366 23 0 0 chr2RHet 223960 224003 -3064758 + DOC4_DM LINE Jockey 1309 1351 -1440 2 586 1096 120 102 8 chr2RHet 224003 224238 -3064523 + FB4_DM DNA Tc1 1 257 -3832 2 586 15161 23 33 1 chr2RHet 224251 226198 -3062563 + FW_DM LINE Jockey 2 2010 -2682 2 586 17377 18 53 2 chr2RHet 226208 228577 -3060184 + FW_DM LINE Jockey 2201 4691 -1 2 586 985 98 29 6 chr2RHet 228575 228749 -3060012 + FB4_DM DNA Tc1 281 458 -3631 2 586 2439 278 74 13 chr2RHet 228760 230106 -3058655 - Copia2_I LTR Copia -2250 1912 485 2 586 405 145 0 13 chr2RHet 230154 230231 -3058530 + ACCORD2_LTR LTR Gypsy 140 215 0 2 586 3167 88 182 5 chr2RHet 230437 231357 -3057404 + DOC4_DM LINE Jockey 914 1904 -887 2 586 295 259 42 33 chr2RHet 231381 231501 -3057260 + DOC LINE Jockey 2461 2581 -2159 2 586 794 249 13 13 chr2RHet 231825 232053 -3056708 + DOC LINE Jockey 3220 3447 -1278 2 586 24 32 0 0 chr2RHet 232490 232521 -3056240 + AT_rich Low_complexity Low_complexity 1 31 0 2 586 253 94 0 117 chr2RHet 232860 232920 -3055841 + PROTOP_A DNA P 1 53 -1052 2 586 7410 26 4 1 chr2RHet 232893 233831 -3054930 + PROTOP_A DNA P 162 1102 -3 2 586 1073 50 53 47 chr2RHet 233832 234001 -3054760 - DMCR1A LINE CR1 -271 4199 4030 2 586 1377 18 0 0 chr2RHet 234000 234163 -3054598 - DMCR1A LINE CR1 -565 3905 3743 2 586 17225 32 29 1 chr2RHet 234161 236827 -3051934 - DMCR1A LINE CR1 -847 3623 884 2 586 2145 193 49 13 chr2RHet 236824 237640 -3051121 - DM176_I LTR Gypsy -5440 980 96 2 586 1318 191 10 108 chr2RHet 237747 238163 -3050598 - DM176_LTR LTR Gypsy -2 505 131 2 586 239 260 42 0 chr2RHet 238139 238235 -3050526 - DM297_LTR LTR Gypsy -314 100 1 2 586 970 176 79 0 chr2RHet 238252 238479 -3050282 - DMCR1A LINE CR1 -8 4462 4218 2 586 1791 134 73 15 chr2RHet 238476 238816 -3049945 - DMCR1A LINE CR1 -813 3657 3298 2 586 797 192 63 89 chr2RHet 238977 239280 -3049481 + DNAREP1_DM LINE Penelope 53 347 -247 2 586 225 57 0 0 chr2RHet 239289 239324 -3049437 + DNAREP1_DM LINE Penelope 538 572 -22 2 586 1370 123 352 23 chr2RHet 240709 241007 -3047754 + DMCR1A LINE CR1 1984 2379 -2091 2 586 408 233 0 32 chr2RHet 240997 241121 -3047640 - Copia_I LTR Copia -358 4235 4116 2 586 403 151 0 0 chr2RHet 241127 241200 -3047561 + DMCR1A LINE CR1 591 663 -3807 2 586 312 129 0 75 chr2RHet 241247 241314 -3047447 + DMCR1A LINE CR1 800 861 -3609 2 586 446 88 15 0 chr2RHet 241317 241385 -3047376 + DMCR1A LINE CR1 1109 1177 -3293 2 586 259 257 9 9 chr2RHet 241397 241503 -3047258 + DNAREP1_DM LINE Penelope 150 255 -339 2 586 2957 155 184 9 chr2RHet 241658 242313 -3046448 + DMCR1A LINE CR1 1349 2118 -2352 2 586 330 298 50 8 chr2RHet 242357 242597 -3046164 + Copia_I LTR Copia 3537 3786 -807 2 586 275 312 74 0 chr2RHet 242643 242819 -3045942 + Copia_I LTR Copia 3899 4087 -506 2 586 256 56 0 0 chr2RHet 244285 244321 -3044440 + DNAREP1_DM LINE Penelope 66 101 -493 2 586 2126 199 45 5 chr2RHet 244431 244949 -3043812 + DMRT1B LINE R1 460 989 -4194 2 586 936 182 284 8 chr2RHet 244953 245313 -3043448 + DMRT1B LINE R1 1559 2018 -3165 2 586 2248 154 61 5 chr2RHet 245345 245783 -3042978 + DMRT1B LINE R1 4302 4764 -419 2 586 550 99 0 90 chr2RHet 245783 245883 -3042878 + Gypsy8_LTR LTR Gypsy 1 91 -213 2 586 1352 142 184 33 chr2RHet 246700 247005 -3041756 + DMRT1B LINE R1 4815 5165 -18 2 586 21 0 0 0 chr2RHet 247694 247715 -3041046 + AT_rich Low_complexity Low_complexity 1 21 0 2 586 30 0 0 0 chr2RHet 248412 248442 -3040319 + AT_rich Low_complexity Low_complexity 1 30 0 2 586 1648 83 104 11 chr2RHet 248698 248977 -3039784 - DNAREP1_DM LINE Penelope 0 594 290 2 586 584 116 164 14 chr2RHet 248980 249120 -3039641 - DNAREP1_DM LINE Penelope -208 386 226 2 586 1389 58 16 0 chr2RHet 249859 250048 -3038713 - PROTOP_B DNA P 0 1153 962 2 586 895 138 76 76 chr2RHet 250091 250381 -3038380 - Gypsy_LTR LTR Gypsy -46 436 147 2 586 1428 136 186 20 chr2RHet 251042 251343 -3037418 + DMRT1B LINE R1 4815 5165 -18 2 586 21 0 0 0 chr2RHet 252037 252058 -3036703 + AT_rich Low_complexity Low_complexity 1 21 0 2 587 14354 1 0 0 chr2RHet 292452 294140 -2994621 + ACCORD_I LTR Gypsy 4601 6288 0 2 587 3647 2 146 0 chr2RHet 294140 294627 -2994134 + ACCORD_LTR LTR Gypsy 1 558 0 2 587 4644 13 9 3 chr2RHet 294627 295629 -2993132 + ACCORD_I LTR Gypsy 1 764 -5524 2 587 27774 2 0 0 chr2RHet 295619 298873 -2989888 + ACCORD_I LTR Gypsy 3035 6288 0 2 587 3647 2 146 0 chr2RHet 298873 299360 -2989401 + ACCORD_LTR LTR Gypsy 1 558 0 2 587 4638 13 10 4 chr2RHet 299360 300362 -2988399 + ACCORD_I LTR Gypsy 1 764 -5524 2 587 27803 1 0 0 chr2RHet 300352 303606 -2985155 + ACCORD_I LTR Gypsy 3035 6288 0 2 587 3209 3 74 0 chr2RHet 303606 303790 -2984971 + ACCORD_LTR LTR Gypsy 1 184 -374 2 587 210 118 0 0 chr2RHet 303790 303824 -2984937 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 587 3209 6 324 0 chr2RHet 303824 304097 -2984664 + ACCORD_LTR LTR Gypsy 185 558 0 2 587 513 195 26 0 chr2RHet 304097 304210 -2984551 - Gypsy_I LTR Gypsy -530 5977 5862 2 587 832 85 17 0 chr2RHet 304212 304330 -2984431 - Gypsy_I LTR Gypsy -1247 5260 5141 2 587 3450 113 77 9 chr2RHet 304323 304893 -2983868 - Gypsy_I LTR Gypsy -1764 4743 4135 2 587 3674 139 53 0 chr2RHet 304861 305488 -2983273 - Gypsy_I LTR Gypsy -2539 3968 3309 2 587 4578 146 1 0 chr2RHet 305497 306250 -2982511 - Gypsy_I LTR Gypsy -3373 3134 2381 2 587 2852 189 169 30 chr2RHet 306259 307014 -2981747 - Gypsy_I LTR Gypsy -4539 1968 1109 2 587 2065 27 0 11 chr2RHet 307008 307268 -2981493 + DMCR1A LINE CR1 3914 4170 -300 2 587 1125 29 0 0 chr2RHet 307270 307407 -2981354 + DMCR1A LINE CR1 4334 4470 0 2 587 1686 201 190 5 chr2RHet 307407 307965 -2980796 - Gypsy_I LTR Gypsy -5393 1114 454 2 587 31 0 0 0 chr2RHet 307985 308016 -2980745 + AT_rich Low_complexity Low_complexity 1 31 0 2 587 2184 69 13 3 chr2RHet 308016 308323 -2980438 - BS2 LINE Jockey 0 4721 4412 2 587 537 31 0 0 chr2RHet 308325 308390 -2980371 - PROTOP_B DNA P -1078 75 11 2 587 264 289 17 42 chr2RHet 308458 308577 -2980184 - Copia2_I LTR Copia -2860 1302 1187 2 587 581 306 0 0 chr2RHet 308585 308791 -2979970 - Copia2_I LTR Copia -3529 633 428 2 587 436 132 0 13 chr2RHet 308795 308872 -2979889 + ACCORD2_LTR LTR Gypsy 140 215 0 2 587 2842 67 212 4 chr2RHet 309078 309854 -2978907 + DOC4_DM LINE Jockey 914 1851 -940 2 587 2810 3 0 0 chr2RHet 309860 310183 -2978578 + DOC LINE Jockey 3471 3793 -932 2 587 5909 6 0 3 chr2RHet 310185 310890 -2977871 + DOC LINE Jockey 4018 4720 -5 2 587 544 215 0 7 chr2RHet 310890 311044 -2977717 + FW2_DM LINE Jockey 1346 1493 -2468 2 587 355 317 72 45 chr2RHet 311217 311689 -2977072 + FW_DM LINE Jockey 2584 3068 -1624 2 587 1143 187 0 0 chr2RHet 311817 312015 -2976746 - Gypsy_I LTR Gypsy -5201 1306 1109 2 587 4465 27 7 0 chr2RHet 312009 312562 -2976199 + DMCR1A LINE CR1 3914 4470 0 2 587 1658 220 217 4 chr2RHet 312562 313022 -2975739 - Gypsy_I LTR Gypsy -5393 1114 557 2 587 10867 4 0 4 chr2RHet 313032 314285 -2974476 + BS LINE Jockey 3879 5126 0 2 587 536 72 24 0 chr2RHet 314301 314384 -2974377 - Gypsy_I LTR Gypsy -5969 538 454 2 587 29 28 0 0 chr2RHet 314396 314432 -2974329 + AT_rich Low_complexity Low_complexity 1 36 0 2 587 2215 69 13 0 chr2RHet 314432 314738 -2974023 - BS2 LINE Jockey 0 4721 4412 2 587 537 31 0 0 chr2RHet 314740 314805 -2973956 - PROTOP_B DNA P -1078 75 11 2 587 1834 288 36 16 chr2RHet 314873 315675 -2973086 - Copia2_I LTR Copia -2860 1302 485 2 587 405 145 0 13 chr2RHet 315723 315800 -2972961 + ACCORD2_LTR LTR Gypsy 140 215 0 2 587 2857 68 211 4 chr2RHet 316006 316783 -2971978 + DOC4_DM LINE Jockey 914 1851 -940 2 587 2787 6 0 0 chr2RHet 316789 317112 -2971649 + DOC LINE Jockey 3471 3793 -932 2 587 5926 6 0 1 chr2RHet 317114 317816 -2970945 + DOC LINE Jockey 4018 4718 -7 2 587 544 215 0 7 chr2RHet 317816 317970 -2970791 + FW2_DM LINE Jockey 1346 1493 -2468 2 587 315 181 14 0 chr2RHet 317981 318050 -2970711 + FW2_DM LINE Jockey 1768 1830 -2131 2 587 1432 305 85 20 chr2RHet 318168 319191 -2969570 + FW_DM LINE Jockey 2758 3847 -845 2 587 3038 54 2 15 chr2RHet 319191 319615 -2969146 - STALKER4_LTR LTR Gypsy -3 399 15 2 587 875 0 0 0 chr2RHet 319614 319726 -2969035 - STALKER4_I LTR Gypsy -86 6444 6333 2 587 12006 3 1 6 chr2RHet 319787 321198 -2967563 + DOC LINE Jockey 32 1434 -3291 2 587 995 0 0 20 chr2RHet 321212 321361 -2967400 + DOC LINE Jockey 4580 4725 0 2 587 23930 6 1 3 chr2RHet 321362 324230 -2964531 - STALKER4_I LTR Gypsy -195 6335 3472 2 587 230 281 11 11 chr2RHet 326585 326675 -2962086 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 2 587 262 358 0 0 chr2RHet 327698 327909 -2960852 + Invader3_I LTR Gypsy 4059 4193 -695 2 587 12112 44 45 9 chr2RHet 328659 331593 -2957168 - STALKER4_I LTR Gypsy -3152 3378 291 2 587 28 48 0 0 chr2RHet 331600 331642 -2957119 + AT_rich Low_complexity Low_complexity 1 42 0 2 587 3159 53 1 14 chr2RHet 331730 332169 -2956592 - STALKER4_LTR LTR Gypsy -3 399 1 2 587 4149 38 70 2 chr2RHet 332169 332728 -2956033 + DOC4_DM LINE Jockey 2195 2791 0 2 587 302 147 0 42 chr2RHet 332803 332874 -2955887 + DOC LINE Jockey 4625 4692 -33 2 587 234 196 0 0 chr2RHet 333101 333147 -2955614 + TIRANT_I LTR Gypsy 3794 3839 -3853 2 587 736 164 104 0 chr2RHet 333170 333353 -2955408 - DMCR1A LINE CR1 -51 4419 4218 2 587 1727 144 77 12 chr2RHet 333350 333688 -2955073 - DMCR1A LINE CR1 -813 3657 3298 2 587 662 141 62 128 chr2RHet 333839 334034 -2954727 + DNAREP1_DM LINE Penelope 53 234 -360 2 587 227 156 200 15 chr2RHet 334311 334376 -2954385 + DNAREP1_DM LINE Penelope 410 486 -108 2 587 4322 106 29 1 chr2RHet 335185 336052 -2952709 + DOC3_DM LINE Jockey 3795 4740 0 2 587 1384 109 394 24 chr2RHet 336228 336517 -2952244 + DMCR1A LINE CR1 1984 2379 -2091 2 587 421 225 0 32 chr2RHet 336507 336631 -2952130 - Copia_I LTR Copia -358 4235 4116 2 587 403 151 0 0 chr2RHet 336637 336710 -2952051 + DMCR1A LINE CR1 591 663 -3807 2 587 339 113 0 75 chr2RHet 336757 336824 -2951937 + DMCR1A LINE CR1 800 861 -3609 2 587 1659 54 8 29 chr2RHet 336873 337119 -2951642 + BATUMI_LTR LTR Pao 32 272 0 2 587 6401 45 115 45 chr2RHet 337119 338228 -2950533 + BATUMI_I LTR Pao 1 1187 -6776 2 587 448 135 22 11 chr2RHet 338241 338331 -2950430 + DNAREP1_DM LINE Penelope 144 234 -360 2 587 227 156 200 15 chr2RHet 338608 338673 -2950088 + DNAREP1_DM LINE Penelope 410 486 -108 2 587 180 0 0 0 chr2RHet 339403 339423 -2949338 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 587 4322 31 57 0 chr2RHet 339456 340321 -2948440 + DOC3_DM LINE Jockey 3827 4740 0 2 587 1384 109 394 24 chr2RHet 340499 340788 -2947973 + DMCR1A LINE CR1 1984 2379 -2091 2 587 421 225 0 32 chr2RHet 340778 340902 -2947859 - Copia_I LTR Copia -358 4235 4116 2 587 403 151 0 0 chr2RHet 340908 340981 -2947780 + DMCR1A LINE CR1 591 663 -3807 2 587 346 164 0 64 chr2RHet 341017 341095 -2947666 + DMCR1A LINE CR1 789 861 -3609 2 587 1659 54 8 29 chr2RHet 341144 341390 -2947371 + BATUMI_LTR LTR Pao 32 272 0 2 587 18512 36 35 38 chr2RHet 341390 344059 -2944702 + BATUMI_I LTR Pao 1 2663 -5300 2 587 2132 40 72 10 chr2RHet 344077 344382 -2944379 - BATUMI_I LTR Pao -1213 6750 6427 2 587 4698 65 1 5 chr2RHet 344405 345068 -2943693 + BATUMI_I LTR Pao 7303 7963 0 2 587 1623 75 4 24 chr2RHet 345090 345336 -2943425 + BATUMI_LTR LTR Pao 32 272 0 2 587 421 108 0 0 chr2RHet 345336 345401 -2943360 + DMCR1A LINE CR1 1128 1192 -3278 2 587 423 74 37 0 chr2RHet 345401 345482 -2943279 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 587 343 278 0 7 chr2RHet 345482 345627 -2943134 + DNAREP1_DM LINE Penelope 112 255 -339 2 587 1446 163 94 0 chr2RHet 345711 346155 -2942606 + DMCR1A LINE CR1 1633 2118 -2352 2 587 323 298 197 4 chr2RHet 346199 346661 -2942100 + Copia_I LTR Copia 3537 4087 -506 2 587 1629 130 95 53 chr2RHet 347009 347367 -2941394 - STALKER4_LTR LTR Gypsy -29 373 1 2 587 26443 74 19 8 chr2RHet 347367 351239 -2937522 + STALKER4_I LTR Gypsy 2616 6530 0 2 587 1775 101 0 86 chr2RHet 351270 351596 -2937165 - Invader3_LTR LTR Gypsy 0 298 1 2 587 1631 117 73 58 chr2RHet 351600 351927 -2936834 + STALKER4_LTR LTR Gypsy 42 373 -29 2 587 10509 118 18 2 chr2RHet 351989 353697 -2935064 - STALKER4_I LTR Gypsy -3910 2620 886 2 587 4298 88 10 3 chr2RHet 354168 354792 -2933969 - STALKER4_I LTR Gypsy -5641 889 262 2 587 8728 25 11 0 chr2RHet 354792 355885 -2932876 - PROTOP_A DNA P 0 1105 1 2 587 1561 44 4 77 chr2RHet 355885 356157 -2932604 - STALKER4_I LTR Gypsy -6262 268 17 2 587 1644 127 95 53 chr2RHet 356210 356568 -2932193 - STALKER4_LTR LTR Gypsy -29 373 1 2 587 536 119 0 90 chr2RHet 357761 357872 -2930889 + DNAREP1_DM LINE Penelope 1 101 -493 2 587 1238 166 265 0 chr2RHet 357982 358435 -2930326 + DMRT1B LINE R1 417 989 -4194 2 587 936 182 281 8 chr2RHet 358435 358802 -2929959 + DMRT1B LINE R1 1552 2018 -3165 2 587 2299 154 56 5 chr2RHet 358834 359274 -2929487 + DMRT1B LINE R1 4302 4764 -419 2 587 553 103 0 93 chr2RHet 359274 359381 -2929380 + Gypsy8_LTR LTR Gypsy 1 97 -207 2 587 395 69 0 0 chr2RHet 359400 359458 -2929303 + Gypsy8_LTR LTR Gypsy 247 304 0 2 587 268 143 24 83 chr2RHet 359458 359542 -2929219 + Gypsy8_I LTR Gypsy 1 79 -4268 2 587 1073 65 0 45 chr2RHet 359638 359815 -2928946 + Gypsy8_I LTR Gypsy 68 236 -4111 2 587 751 112 8 0 chr2RHet 360045 360170 -2928591 + ARS406_DM Unknown Unknown 60 185 -168 2 587 3346 206 55 35 chr2RHet 360078 361314 -2927447 - SAR_DM Satellite Satellite -208 1259 1 2 587 1398 181 7 23 chr2RHet 361361 361666 -2927095 + Gypsy_LTR LTR Gypsy 25 324 -158 2 587 3498 5 0 0 chr2RHet 361666 362065 -2926696 - BLOOD_LTR LTR Gypsy 0 399 1 2 587 56625 0 0 0 chr2RHet 362065 368677 -2920084 - BLOOD_I LTR Gypsy 0 6613 1 2 587 3498 5 0 0 chr2RHet 368677 369076 -2919685 - BLOOD_LTR LTR Gypsy 0 399 1 2 587 495 193 0 32 chr2RHet 369081 369204 -2919557 + Gypsy_LTR LTR Gypsy 327 445 -37 2 587 1584 66 31 0 chr2RHet 369214 369441 -2919320 + Invader2_LTR LTR Gypsy 23 256 -10 2 587 1420 193 48 27 chr2RHet 369456 369829 -2918932 + Gypsy_LTR LTR Gypsy 25 405 -77 2 587 10985 113 45 41 chr2RHet 369907 371850 -2916911 + Gypsy_I LTR Gypsy 1 1951 -4556 2 587 857 115 122 0 chr2RHet 371964 372112 -2916649 - MAX_I LTR Pao -1913 6001 5836 2 587 705 181 158 33 chr2RHet 372111 372294 -2916467 - MAX_I LTR Pao -3603 4311 4106 2 587 472 171 0 0 chr2RHet 372293 372381 -2916380 - MAX_I LTR Pao -3958 3956 3869 2 587 309 143 0 0 chr2RHet 372382 372431 -2916330 - MAX_I LTR Pao -4166 3748 3700 2 587 2570 191 55 7 chr2RHet 372431 372994 -2915767 - MAX_I LTR Pao -4868 3046 2457 2 587 2335 50 0 0 chr2RHet 373466 373765 -2914996 + Baggins1 LINE LOA 5155 5453 0 2 587 444 246 9 0 chr2RHet 374079 374189 -2914572 + DIVER2_I LTR Pao 4035 4145 -2 2 587 1366 121 127 34 chr2RHet 374511 374802 -2913959 + DNAREP1_DM LINE Penelope 236 553 -41 2 587 2032 16 4 0 chr2RHet 374959 375201 -2913560 + Gypsy4_LTR LTR Gypsy 45 287 0 2 587 35171 11 32 2 chr2RHet 375201 379454 -2909307 + Gypsy4_I LTR Gypsy 1 4381 -1907 2 587 1587 209 46 119 chr2RHet 379520 380123 -2908638 - HMSBEAGLE_I LTR Gypsy -161 6368 5810 2 587 5256 120 49 2 chr2RHet 380501 381345 -2907416 - HMSBEAGLE_I LTR Gypsy -711 5818 4936 2 587 13063 1 0 0 chr2RHet 381342 382852 -2905909 + FW_DM LINE Jockey 3183 4692 0 2 587 21715 145 4 11 chr2RHet 382856 386473 -2902288 - HMSBEAGLE_I LTR Gypsy -1582 4947 1353 2 587 1758 9 0 36 chr2RHet 386473 386696 -2902065 - ACCORD2_LTR LTR Gypsy 0 215 1 2 587 1022 47 0 0 chr2RHet 386694 386823 -2901938 - ACCORD2_I LTR Gypsy -1 7211 7083 2 587 486 182 11 102 chr2RHet 386807 386984 -2901777 - ACCORD2_I LTR Gypsy -5521 1691 1531 2 587 1381 22 43 11 chr2RHet 387063 387247 -2901514 - ACCORD2_I LTR Gypsy -5845 1367 1178 2 587 228 86 0 0 chr2RHet 387247 387282 -2901479 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2 587 1064 63 74 6 chr2RHet 387282 387412 -2901349 - ACCORD2_I LTR Gypsy -6069 1143 1014 2 587 3224 5 0 35 chr2RHet 387409 387810 -2900951 - ACCORD2_I LTR Gypsy -6825 387 1 2 587 1701 14 0 36 chr2RHet 387810 388033 -2900728 - ACCORD2_LTR LTR Gypsy 0 215 1 2 587 722 200 0 0 chr2RHet 388038 388173 -2900588 - HMSBEAGLE_I LTR Gypsy -5183 1346 1212 2 587 38 22 0 0 chr2RHet 388322 388367 -2900394 + AT_rich Low_complexity Low_complexity 1 45 0 2 587 1004 98 471 16 chr2RHet 388381 388625 -2900136 - HMSBEAGLE_I LTR Gypsy -6174 355 1 2 587 946 146 33 102 chr2RHet 388624 388868 -2899893 - DMLTR5 LTR Gypsy 0 266 40 2 587 9471 39 17 0 chr2RHet 388956 390190 -2898571 - M4DM DNA Transib -180 1255 1 2 587 1277 26 0 0 chr2RHet 390190 390343 -2898418 + Gypsy4_I LTR Gypsy 6136 6288 0 2 587 1981 48 40 4 chr2RHet 390330 390604 -2898157 + Gypsy4_LTR LTR Gypsy 4 287 0 2 587 23 33 0 0 chr2RHet 390991 391021 -2897740 + AT_rich Low_complexity Low_complexity 1 30 0 2 587 43 20 0 0 chr2RHet 392698 392748 -2896013 + AT_rich Low_complexity Low_complexity 1 50 0 2 587 21 0 0 0 chr2RHet 392945 392966 -2895795 + AT_rich Low_complexity Low_complexity 1 21 0 2 587 259 146 200 0 chr2RHet 393163 393214 -2895547 + DNAREP1_DM LINE Penelope 1 62 -532 2 73 3526 42 0 7 chr2RHet 393214 393673 -2895088 - PROTOP_A DNA P 0 1105 650 2 588 10876 27 10 10 chr2RHet 393672 395083 -2893678 - PROTOP DNA P -3069 1411 1 2 588 752 125 0 0 chr2RHet 395083 395211 -2893550 + DNAREP1_DM LINE Penelope 56 183 -411 2 588 775 131 192 34 chr2RHet 395236 395545 -2893216 + DNAREP1_DM LINE Penelope 137 419 -175 2 588 239 98 48 16 chr2RHet 395551 395613 -2893148 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 588 309 145 0 0 chr2RHet 395713 395796 -2892965 - PROTOP_B DNA P -465 688 606 2 588 5815 54 66 0 chr2RHet 395820 396640 -2892121 - G4_DM LINE Jockey -1 3855 2982 2 588 847 56 8 8 chr2RHet 396645 396771 -2891990 - DOC3_DM LINE Jockey -4608 132 7 2 588 943 26 0 0 chr2RHet 396812 396927 -2891834 - BS4_DM LINE Jockey -66 688 574 2 588 361 325 0 0 chr2RHet 396895 397012 -2891749 - HELENA LINE Jockey -143 518 402 2 588 1193 217 56 51 chr2RHet 397043 397475 -2891286 + Gypsy_LTR LTR Gypsy 29 462 -20 2 588 3023 80 27 0 chr2RHet 397632 398080 -2890681 - BS2 LINE Jockey 0 4721 4262 2 588 444 42 208 0 chr2RHet 398061 398133 -2890628 - BS2 LINE Jockey -598 4123 4037 2 588 489 18 0 0 chr2RHet 398162 398219 -2890542 + BS2 LINE Jockey 4284 4340 -381 2 588 783 101 1 6 chr2RHet 398219 398349 -2890412 + BS2 LINE Jockey 4607 4721 0 2 588 30 27 0 0 chr2RHet 398349 398386 -2890375 + AT_rich Low_complexity Low_complexity 1 37 0 2 588 12079 170 49 4 chr2RHet 398401 400920 -2887841 + Gypsy_I LTR Gypsy 1715 4378 -3144 2 588 3117 118 0 33 chr2RHet 400888 401403 -2887358 + Gypsy_I LTR Gypsy 4135 4632 -1875 2 588 2018 131 6 0 chr2RHet 401409 401722 -2887039 + Gypsy_I LTR Gypsy 4836 5150 -1357 2 588 4418 212 62 1 chr2RHet 401730 402752 -2886009 + Gypsy_I LTR Gypsy 5423 6506 -1 2 588 720 196 76 55 chr2RHet 402880 403155 -2885606 + Gypsy_LTR LTR Gypsy 182 462 -20 2 588 922 254 0 49 chr2RHet 403219 403505 -2885256 - HELENA LINE Jockey -264 397 126 2 588 811 107 0 0 chr2RHet 403514 403636 -2885125 - Gypsy6A_LTR LTR Gypsy -141 279 158 2 588 780 207 6 6 chr2RHet 404229 404399 -2884362 - MARINA DNA Mariner -863 404 235 2 588 588 154 0 9 chr2RHet 404424 404529 -2884232 - DMCR1A LINE CR1 -1287 3183 3080 2 588 835 138 189 0 chr2RHet 404533 404770 -2883991 - DMCR1A LINE CR1 -1664 2806 2525 2 588 23996 18 5 0 chr2RHet 405614 408487 -2880274 - DMRT1A LINE R1 -16 5167 2283 2 588 350 44 0 0 chr2RHet 408524 408569 -2880192 + DNAREP1_DM LINE Penelope 22 66 -528 2 588 496 326 26 17 chr2RHet 409062 409408 -2879353 + G6_DM LINE Jockey 857 1205 -837 2 588 268 274 41 35 chr2RHet 409996 410193 -2878568 + G_DM LINE Jockey 1937 2118 -2228 2 588 252 314 39 35 chr2RHet 410338 410686 -2878075 + FW_DM LINE Jockey 4198 4300 -392 2 588 1415 45 88 15 chr2RHet 411026 411230 -2877531 - DOC3_DM LINE Jockey -2853 1887 1669 2 588 811 10 19 0 chr2RHet 411227 411330 -2877431 - DOC3_DM LINE Jockey -3746 994 890 2 588 3833 56 56 2 chr2RHet 411331 411884 -2876877 - TC1_DM DNA Tc1 -1 1665 1083 2 588 1334 75 35 0 chr2RHet 411862 412062 -2876699 - TC1_DM DNA Tc1 -1459 207 1 2 588 4900 51 129 32 chr2RHet 412536 413738 -2875023 + DMCR1A LINE CR1 259 1577 -2893 2 588 1390 74 0 51 chr2RHet 413745 413959 -2874802 - BURDOCK_LTR LTR Gypsy -72 203 1 2 588 33397 25 32 5 chr2RHet 413960 418163 -2870598 - BURDOCK_I LTR Gypsy 0 5860 1544 2 588 9798 29 7 2 chr2RHet 418152 419381 -2869380 - BURDOCK_I LTR Gypsy -4625 1235 1 2 588 1360 87 134 47 chr2RHet 419381 419634 -2869127 - BURDOCK_LTR LTR Gypsy 0 275 1 2 588 488 62 0 0 chr2RHet 419649 419714 -2869047 + DMCR1A LINE CR1 1674 1738 -2732 2 588 338 297 20 20 chr2RHet 420041 420192 -2868569 - BLASTOPIA_I LTR Gypsy 0 4481 4331 2 588 1523 314 34 30 chr2RHet 420219 421285 -2867476 - BLASTOPIA_I LTR Gypsy -431 4050 2981 2 588 1210 42 47 18 chr2RHet 421309 421479 -2867282 - DOC3_DM LINE Jockey -2897 1843 1669 2 588 855 19 9 0 chr2RHet 421476 421580 -2867181 - DOC3_DM LINE Jockey -3746 994 890 2 588 3846 60 54 0 chr2RHet 421580 422134 -2866627 - TC1_DM DNA Tc1 0 1666 1083 2 588 1412 54 25 10 chr2RHet 422112 422316 -2866445 - TC1_DM DNA Tc1 -1459 207 1 2 588 4900 51 129 32 chr2RHet 422795 423997 -2864764 + DMCR1A LINE CR1 259 1577 -2893 2 588 1390 74 0 51 chr2RHet 424004 424218 -2864543 - BURDOCK_LTR LTR Gypsy -72 203 1 2 588 33397 25 32 5 chr2RHet 424219 428422 -2860339 - BURDOCK_I LTR Gypsy 0 5860 1544 2 588 9798 29 7 2 chr2RHet 428411 429640 -2859121 - BURDOCK_I LTR Gypsy -4625 1235 1 2 588 1360 87 134 47 chr2RHet 429640 429893 -2858868 - BURDOCK_LTR LTR Gypsy 0 275 1 2 588 488 62 0 0 chr2RHet 429908 429973 -2858788 + DMCR1A LINE CR1 1674 1738 -2732 2 588 338 297 20 20 chr2RHet 430300 430451 -2858310 - BLASTOPIA_I LTR Gypsy 0 4481 4331 2 588 1496 315 34 30 chr2RHet 430478 431544 -2857217 - BLASTOPIA_I LTR Gypsy -431 4050 2981 2 588 1210 42 47 18 chr2RHet 431568 431738 -2857023 - DOC3_DM LINE Jockey -2897 1843 1669 2 588 855 19 9 0 chr2RHet 431735 431839 -2856922 - DOC3_DM LINE Jockey -3746 994 890 2 588 3819 62 56 0 chr2RHet 431839 432392 -2856369 - TC1_DM DNA Tc1 0 1666 1083 2 588 1350 70 35 0 chr2RHet 432370 432570 -2856191 - TC1_DM DNA Tc1 -1459 207 1 2 588 2003 42 73 91 chr2RHet 433044 433384 -2855377 + DMCR1A LINE CR1 259 592 -3878 2 588 1971 72 95 0 chr2RHet 433383 433687 -2855074 - TC1_DM DNA Tc1 -251 1415 1083 2 588 1334 75 35 0 chr2RHet 433665 433865 -2854896 - TC1_DM DNA Tc1 -1459 207 1 2 588 1971 48 73 91 chr2RHet 434337 434678 -2854083 + DMCR1A LINE CR1 258 592 -3878 2 588 1985 69 95 0 chr2RHet 434678 434982 -2853779 - TC1_DM DNA Tc1 -251 1415 1083 2 588 1309 80 35 0 chr2RHet 434960 435160 -2853601 - TC1_DM DNA Tc1 -1459 207 1 2 588 1980 45 73 91 chr2RHet 435634 435974 -2852787 + DMCR1A LINE CR1 259 592 -3878 2 588 1986 69 95 0 chr2RHet 435973 436277 -2852484 - TC1_DM DNA Tc1 -251 1415 1083 2 588 1363 65 35 0 chr2RHet 436255 436455 -2852306 - TC1_DM DNA Tc1 -1459 207 1 2 588 5877 42 45 45 chr2RHet 436929 437777 -2850984 + DMCR1A LINE CR1 259 1106 -3364 2 588 16364 66 135 6 chr2RHet 437785 440299 -2848462 + DMCR1A LINE CR1 1562 4398 -72 2 588 290 262 55 24 chr2RHet 440300 440464 -2848297 + MDG1_I LTR Gypsy 1219 1387 -5209 2 588 230 190 114 0 chr2RHet 440459 440538 -2848223 + MDG1_I LTR Gypsy 1734 1821 -4775 2 588 815 186 34 39 chr2RHet 440512 440719 -2848042 + MDG1_I LTR Gypsy 3784 3989 -2607 2 588 1972 183 180 15 chr2RHet 440721 441567 -2847194 + MDG1_I LTR Gypsy 5061 6045 -551 2 588 2226 118 140 8 chr2RHet 441569 442193 -2846568 - DNAREP1_DM LINE Penelope 0 594 13 2 588 606 356 21 5 chr2RHet 442261 442645 -2846116 + NINJA_I LTR Pao 4846 5235 -776 2 588 307 327 58 0 chr2RHet 442666 442822 -2845939 + NINJA_I LTR Pao 5429 5593 -418 2 588 283 207 25 49 chr2RHet 446830 446952 -2841809 + A-rich Low_complexity Low_complexity 3 121 0 2 588 2858 20 56 0 chr2RHet 447364 447705 -2841056 - DIVER2_LTR LTR Pao -25 360 1 2 588 769 78 0 10 chr2RHet 447705 447809 -2840952 - DIVER2_I LTR Pao 0 4147 4045 2 588 4133 40 6 6 chr2RHet 447778 448282 -2840479 - DIVER2_I LTR Pao -3210 937 434 2 588 3174 62 48 0 chr2RHet 448483 448750 -2840011 - DIVER2_I LTR Pao -3708 439 173 2 588 183 80 0 0 chr2RHet 448750 448775 -2839986 + (TATG)n Simple_repeat Simple_repeat 3 27 0 2 588 3174 62 48 0 chr2RHet 448775 448926 -2839835 - DIVER2_I LTR Pao -3975 172 2 2 588 3432 16 0 0 chr2RHet 448926 449311 -2839450 - DIVER2_LTR LTR Pao 0 385 1 2 588 30 27 0 0 chr2RHet 449322 449359 -2839402 + AT_rich Low_complexity Low_complexity 1 37 0 2 588 1553 315 84 17 chr2RHet 451101 452342 -2836419 + Gypsy5_I LTR Gypsy 2347 3005 -3504 2 588 1697 293 79 35 chr2RHet 454803 455791 -2832970 + TOM_I LTR Gypsy 4677 5707 -405 2 588 1077 343 20 31 chr2RHet 455796 456335 -2832426 + BS LINE Jockey 2629 3161 -1965 2 588 586 144 90 8 chr2RHet 456442 456575 -2832186 + DM297_LTR LTR Gypsy 266 409 -5 2 588 832 192 33 17 chr2RHet 456628 456808 -2831953 + MDG1_I LTR Gypsy 929 1111 -5485 2 588 401 287 13 13 chr2RHet 457065 457217 -2831544 + MDG1_I LTR Gypsy 1236 1387 -5209 2 588 531 167 132 0 chr2RHet 457212 457326 -2831435 + MDG1_I LTR Gypsy 1734 1862 -4734 2 588 842 202 186 16 chr2RHet 457319 457566 -2831195 + MDG1_I LTR Gypsy 3770 4058 -2538 2 588 8762 79 125 7 chr2RHet 457558 459565 -2829196 - DMCR1A LINE CR1 -137 4333 2088 2 588 3957 57 37 14 chr2RHet 459565 460082 -2828679 - DMCR1A LINE CR1 -3625 845 317 2 588 22 0 0 0 chr2RHet 460129 460151 -2828610 + AT_rich Low_complexity Low_complexity 1 22 0 2 588 34 24 0 0 chr2RHet 460171 460212 -2828549 + AT_rich Low_complexity Low_complexity 1 41 0 2 588 344 322 80 60 chr2RHet 460407 461008 -2827753 + HMSBEAGLE_I LTR Gypsy 2301 2913 -3616 2 588 394 284 111 13 chr2RHet 461077 461302 -2827459 + HMSBEAGLE_I LTR Gypsy 3109 3355 -3174 2 588 699 342 53 52 chr2RHet 461319 462409 -2826352 + HMSBEAGLE_I LTR Gypsy 4049 5139 -1390 2 588 925 34 0 63 chr2RHet 462464 462591 -2826170 - DOC5_DM LINE Jockey -1010 3672 3554 2 588 2460 91 5 7 chr2RHet 462589 463022 -2825739 - Baggins1 LINE LOA -4853 600 87 2 588 7488 44 36 25 chr2RHet 463042 464069 -2824692 + PROTOP_A DNA P 1 1038 -67 2 588 257 299 50 78 chr2RHet 465287 465505 -2823256 - Invader3_I LTR Gypsy -2324 2564 2353 2 588 21 57 0 0 chr2RHet 465891 465926 -2822835 + AT_rich Low_complexity Low_complexity 1 35 0 2 588 48 81 0 0 chr2RHet 466126 466237 -2822524 + AT_rich Low_complexity Low_complexity 1 111 0 2 588 1558 203 163 2 chr2RHet 468191 468751 -2820010 + MDG1_I LTR Gypsy 5395 6045 -551 2 588 2296 146 139 26 chr2RHet 468753 469287 -2819474 - DNAREP1_DM LINE Penelope 0 594 1 2 588 1061 117 184 5 chr2RHet 469602 469825 -2818936 - FB4_DM DNA Tc1 0 4089 3827 2 588 463 132 169 57 chr2RHet 469834 470011 -2818750 - FB4_DM DNA Tc1 -3321 768 572 2 588 23 68 0 0 chr2RHet 471900 471944 -2816817 + AT_rich Low_complexity Low_complexity 1 44 0 2 588 1698 123 199 4 chr2RHet 472124 472587 -2816174 + I_DM LINE I 4911 5464 -767 2 588 619 287 97 4 chr2RHet 473113 473372 -2815389 - Gypsy6_I LTR Gypsy -2186 4826 4544 2 588 636 298 84 76 chr2RHet 474161 474687 -2814074 + DM1731_I LTR Copia 1524 2053 -1923 2 588 468 62 436 0 chr2RHet 475284 475461 -2813300 - DNAREP1_DM LINE Penelope 0 594 341 2 588 1079 108 165 15 chr2RHet 475547 475753 -2813008 - Gypsy12A_LTR LTR Gypsy -998 1282 1046 2 588 1832 120 70 0 chr2RHet 475753 476053 -2812708 + MAX_LTR LTR Pao 1 321 0 2 588 12718 77 37 188 chr2RHet 476053 478989 -2809772 + MAX_I LTR Pao 1 2493 -5421 2 588 1992 122 169 58 chr2RHet 478986 479535 -2809226 - Gypsy12A_LTR LTR Gypsy -1235 1045 436 2 588 2466 69 0 0 chr2RHet 479536 479854 -2808907 - DMCR1A LINE CR1 -2413 2057 1740 2 588 2349 56 0 19 chr2RHet 480155 480465 -2808296 - DMCR1A LINE CR1 -3353 1117 814 2 588 735 182 0 0 chr2RHet 480468 480589 -2808172 - Gypsy12_I LTR Gypsy -960 4586 4466 2 588 3471 150 2 18 chr2RHet 480594 481143 -2807618 - Gypsy12_I LTR Gypsy -2029 3517 2978 2 588 3019 185 5 7 chr2RHet 481140 481707 -2807054 - Gypsy12_I LTR Gypsy -2824 2722 2157 2 588 881 156 138 35 chr2RHet 481733 481965 -2806796 + DM297_LTR LTR Gypsy 159 414 0 2 588 3997 91 187 34 chr2RHet 481965 482780 -2805981 + DM297_I LTR Gypsy 1 940 -5227 2 588 13949 73 83 5 chr2RHet 482752 485202 -2803559 + DM297_I LTR Gypsy 1058 3699 -2468 2 588 2839 40 6 0 chr2RHet 485202 485554 -2803207 + ROOA_LTR LTR Pao 1 354 -32 2 588 581 27 14 0 chr2RHet 485551 485624 -2803137 + ROOA_I LTR Pao 74 147 -6702 2 588 1179 58 135 26 chr2RHet 485631 485824 -2802937 + ROOA_I LTR Pao 6 219 -6630 2 588 5163 35 41 52 chr2RHet 485823 486551 -2802210 + ROOA_I LTR Pao 468 1187 -5662 2 588 6843 48 15 17 chr2RHet 486540 487433 -2801328 + ROOA_I LTR Pao 1533 2423 -4426 2 588 4144 38 0 0 chr2RHet 487419 487916 -2800845 + ROOA_I LTR Pao 4069 4565 -2284 2 588 4764 87 54 4 chr2RHet 487912 488615 -2800146 + ROOA_I LTR Pao 4704 6090 -2166 2 588 327 45 0 43 chr2RHet 488652 488698 -2800063 + ROOA_I LTR Pao 6799 6842 -7 2 588 3219 26 13 0 chr2RHet 488713 489094 -2799667 + ROOA_LTR LTR Pao 1 386 0 2 588 8716 62 49 1 chr2RHet 489094 490307 -2798454 + DM297_I LTR Gypsy 3695 4966 -1201 2 588 7239 64 50 0 chr2RHet 490308 491351 -2797410 + DM297_I LTR Gypsy 5072 6166 -1 2 588 1601 123 116 35 chr2RHet 491353 491725 -2797036 + DM297_LTR LTR Gypsy 3 404 -10 2 588 1891 107 86 127 chr2RHet 493270 493687 -2795074 - DNAREP1_DM LINE Penelope -41 553 154 2 588 1363 148 26 11 chr2RHet 493675 493942 -2794819 - DNAREP1_DM LINE Penelope -263 331 61 2 588 23 54 0 0 chr2RHet 493978 494015 -2794746 + AT_rich Low_complexity Low_complexity 1 37 0 2 588 202 204 0 0 chr2RHet 495240 495284 -2793477 + (TATG)n Simple_repeat Simple_repeat 4 47 0 2 588 419 213 363 43 chr2RHet 495304 495517 -2793244 - DNAREP1_DM LINE Penelope -20 574 294 2 588 31 26 0 0 chr2RHet 495535 495573 -2793188 + AT_rich Low_complexity Low_complexity 1 38 0 2 588 574 345 8 49 chr2RHet 496954 497544 -2791217 - MICROPIA_I LTR Gypsy -902 3574 3163 2 588 744 300 92 24 chr2RHet 497541 498120 -2790641 - MICROPIA_I LTR Gypsy -1014 3085 2404 2 588 291 266 54 54 chr2RHet 498211 498358 -2790403 - MICROPIA_I LTR Gypsy -1828 2271 2125 2 588 690 308 70 22 chr2RHet 498515 498881 -2789880 - Invader4_I LTR Gypsy -1995 418 33 2 588 527 288 10 5 chr2RHet 499053 499245 -2789516 - TABOR_I LTR Gypsy -4315 2021 1829 2 588 1120 276 19 19 chr2RHet 500194 500655 -2788106 - Copia_I LTR Copia -383 4210 3750 2 588 408 299 18 22 chr2RHet 500659 500885 -2787876 - Copia_I LTR Copia -955 3638 3414 2 588 3597 7 2 2 chr2RHet 500893 501316 -2787445 + Invader1_LTR LTR Gypsy 1 423 0 2 588 848 202 93 95 chr2RHet 501349 501716 -2787045 - ROVER-LTR_DM LTR Gypsy 0 367 2 2 588 216 0 0 0 chr2RHet 501716 501740 -2787021 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 588 430 308 51 27 chr2RHet 501901 502352 -2786409 - Copia_I LTR Copia -1412 3181 2720 2 588 300 237 17 17 chr2RHet 502597 502717 -2786044 - Copia_I LTR Copia -2322 2271 2152 2 588 1106 271 27 21 chr2RHet 502756 503242 -2785519 - Copia_I LTR Copia -2705 1888 1400 2 588 869 319 29 24 chr2RHet 504000 504546 -2784215 - Copia_I LTR Copia -3857 736 188 2 588 208 20 102 0 chr2RHet 505437 505486 -2783275 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 588 1794 72 32 55 chr2RHet 505486 505795 -2782966 + Gypsy6A_LTR LTR Gypsy 1 302 -118 2 588 182 91 0 29 chr2RHet 505868 505902 -2782859 + (CCA)n Simple_repeat Simple_repeat 2 34 0 2 588 9841 274 22 13 chr2RHet 506161 511758 -2777003 + Gypsy6_I LTR Gypsy 862 7012 0 2 588 1816 88 22 60 chr2RHet 511760 512074 -2776687 + Gypsy6A_LTR LTR Gypsy 1 302 -118 2 588 182 91 0 29 chr2RHet 512147 512181 -2776580 + (CCA)n Simple_repeat Simple_repeat 2 34 0 2 588 26 30 0 0 chr2RHet 512321 512354 -2776407 + AT_rich Low_complexity Low_complexity 1 33 0 2 588 400 312 7 7 chr2RHet 512361 512500 -2776261 + Gypsy6_I LTR Gypsy 1195 1333 -5679 2 588 13605 260 16 17 chr2RHet 512501 517240 -2771521 + Gypsy6_I LTR Gypsy 1537 5512 -623 2 588 4797 295 38 29 chr2RHet 517228 519436 -2769325 + Gypsy2_I LTR Gypsy 3950 7012 0 2 588 1843 85 22 60 chr2RHet 519438 519752 -2769009 + Gypsy6A_LTR LTR Gypsy 1 302 -118 2 588 337 260 78 11 chr2RHet 520175 520354 -2768407 - Stalker2_I LTR Gypsy -5472 1930 1740 2 588 1559 160 42 19 chr2RHet 522506 522819 -2765942 + GTWIN_LTR LTR Gypsy 60 379 -116 2 588 414 263 17 11 chr2RHet 522933 523110 -2765651 - QUASIMODO_I LTR Gypsy -306 5754 5577 2 588 7923 34 51 0 chr2RHet 523110 524161 -2764600 + PROTOP_A DNA P 1 1105 0 2 73 1854 292 38 32 chr2RHet 524162 525308 -2763453 - QUASIMODO_I LTR Gypsy -478 5582 4431 2 589 645 218 106 31 chr2RHet 525439 525666 -2763095 - TV1I LTR Gypsy -1870 4093 3850 2 589 1526 261 96 36 chr2RHet 525659 526438 -2762323 - QUASIMODO_I LTR Gypsy -2258 3802 2977 2 589 2627 64 0 0 chr2RHet 526436 526778 -2761983 - Baggins1 LINE LOA 0 5453 5112 2 589 20918 44 71 8 chr2RHet 526776 529844 -2758917 - Baggins1 LINE LOA -457 4996 1736 2 589 3915 83 58 15 chr2RHet 529843 530442 -2758319 - IVK_DM LINE I -307 5095 4471 2 589 1210 227 76 3 chr2RHet 530440 530807 -2757954 - TV1I LTR Gypsy -3149 2814 2421 2 589 1579 229 67 12 chr2RHet 530811 531306 -2757455 - QUASIMODO_I LTR Gypsy -3622 2438 1917 2 589 299 286 93 37 chr2RHet 531601 531870 -2756891 - QUASIMODO_I LTR Gypsy -4331 1729 1446 2 589 12450 35 66 4 chr2RHet 532001 534799 -2753962 - PROTOP DNA P 0 4480 1510 2 589 2148 26 8 0 chr2RHet 534799 535063 -2753698 + Invader2_LTR LTR Gypsy 1 266 0 2 589 8897 35 45 18 chr2RHet 535063 536316 -2752445 - PROTOP DNA P -2967 1513 227 2 589 8603 32 3 6 chr2RHet 536318 537427 -2751334 - PROTOP_A DNA P 0 1105 1 2 589 461 292 87 36 chr2RHet 537739 538186 -2750575 - QUASIMODO_I LTR Gypsy -5232 828 370 2 589 3077 67 85 6 chr2RHet 538755 539250 -2749511 + DOC5_DM LINE Jockey 243 776 -3906 2 589 4005 51 11 2 chr2RHet 539257 540042 -2748719 + DOC5_DM LINE Jockey 1231 2076 -2606 2 589 3556 64 15 19 chr2RHet 540047 540569 -2748192 + DOC5_DM LINE Jockey 2241 2760 -1922 2 589 25834 38 3 3 chr2RHet 540568 543968 -2744793 - G2_DM LINE Jockey -4 3098 4 2 589 4203 182 83 104 chr2RHet 543981 545781 -2742980 + DOC5_DM LINE Jockey 2765 4527 -155 2 589 189 0 0 0 chr2RHet 545781 545802 -2742959 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2 589 4760 59 3 10 chr2RHet 545802 546509 -2742252 - I_DM LINE I -772 5459 4758 2 589 8600 72 3 1 chr2RHet 546513 547744 -2741017 - I_DM LINE I -1675 4556 3323 2 589 1584 53 143 0 chr2RHet 547738 547983 -2740778 - I_DM LINE I -3715 2516 2237 2 589 3813 66 2 12 chr2RHet 547994 548596 -2740165 - I_DM LINE I -4655 1576 981 2 589 2352 63 3 0 chr2RHet 548592 548923 -2739838 - I_DM LINE I -5768 463 132 2 589 1047 57 57 0 chr2RHet 548924 549082 -2739679 + DOC5_DM LINE Jockey 4516 4682 0 2 589 437 203 22 136 chr2RHet 549185 549413 -2739348 - DNAREP1_DM LINE Penelope -157 437 236 2 589 1308 171 4 43 chr2RHet 549516 549797 -2738964 - Gypsy12A_LTR LTR Gypsy -722 1558 1289 2 589 1366 124 14 42 chr2RHet 549827 550112 -2738649 - Gypsy12A_LTR LTR Gypsy -989 1291 1015 2 589 380 35 17 0 chr2RHet 550117 550174 -2738587 - DMCR1A LINE CR1 -1 4469 4412 2 589 8738 27 3 5 chr2RHet 550174 551282 -2737479 + PROTOP_A DNA P 1 1105 0 2 589 2748 48 8 8 chr2RHet 551282 551658 -2737103 - DMCR1A LINE CR1 -52 4418 4043 2 589 486 46 0 15 chr2RHet 551655 551721 -2737040 - DMCR1A LINE CR1 -755 3715 3651 2 589 2427 158 30 30 chr2RHet 551702 552499 -2736262 - Gypsy12A_LTR LTR Gypsy -1544 736 1 2 589 2213 158 104 5 chr2RHet 552509 553069 -2735692 - Gypsy12_I LTR Gypsy -29 5517 4903 2 589 5596 177 82 8 chr2RHet 553068 554527 -2734234 - Gypsy12_I LTR Gypsy -2924 2622 1057 2 589 1693 189 188 46 chr2RHet 554566 555372 -2733389 - Gypsy12_I LTR Gypsy -4625 921 1 2 589 2930 105 101 13 chr2RHet 555372 556064 -2732697 - Gypsy12A_LTR LTR Gypsy 0 2336 1468 2 589 201 39 0 0 chr2RHet 556064 556090 -2732671 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2 589 2579 94 79 35 chr2RHet 556090 556370 -2732391 - Gypsy12A_LTR LTR Gypsy -813 1467 1202 2 589 7963 67 18 0 chr2RHet 556373 557418 -2731343 - Gypsy12A_LTR LTR Gypsy -1216 1064 1 2 589 319 158 14 28 chr2RHet 557422 557502 -2731259 - DNAREP1_DM LINE Penelope -122 472 422 2 589 9744 78 73 5 chr2RHet 557481 558878 -2729883 + R1_DM LINE R1 3056 4547 -809 2 589 707 104 0 0 chr2RHet 558891 558987 -2729774 + R1_DM LINE R1 5261 5356 0 2 589 1106 101 71 57 chr2RHet 558987 559198 -2729563 - DNAREP1_DM LINE Penelope -157 437 224 2 589 304 354 77 47 chr2RHet 559486 560399 -2728362 - BLASTOPIA_I LTR Gypsy -1 4480 3541 2 589 510 332 58 71 chr2RHet 560735 561904 -2726857 - BLASTOPIA_I LTR Gypsy -1413 3475 2178 2 589 1189 98 68 31 chr2RHet 563879 564101 -2724660 - DNAREP1_DM LINE Penelope -333 261 32 2 589 22 80 0 0 chr2RHet 564415 564465 -2724296 + AT_rich Low_complexity Low_complexity 1 50 0 2 589 225 151 189 0 chr2RHet 565059 565112 -2723649 - DNAREP1_DM LINE Penelope -9 585 523 2 589 530 105 23 0 chr2RHet 565441 565527 -2723234 - DNAREP1_DM LINE Penelope -462 132 45 2 589 492 167 184 0 chr2RHet 565914 566028 -2722733 + PROTOP_B DNA P 1 135 -1018 2 589 1727 276 93 3 chr2RHet 566491 567058 -2721703 + G_DM LINE Jockey 886 1503 -2843 2 589 1006 176 10 21 chr2RHet 567064 567256 -2721505 + G2_DM LINE Jockey 297 486 -2616 2 589 822 163 65 12 chr2RHet 568257 568425 -2720336 - PROTOP_B DNA P -26 1127 951 2 589 421 85 0 17 chr2RHet 568536 568596 -2720165 + DNAREP1_DM LINE Penelope 512 570 -24 2 589 843 184 87 5 chr2RHet 568587 568805 -2719956 + DNAREP1_DM LINE Penelope 97 332 -262 2 589 311 125 491 18 chr2RHet 568805 568919 -2719842 + DNAREP1_DM LINE Penelope 220 387 -207 2 589 21 0 0 0 chr2RHet 570579 570600 -2718161 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 516 137 0 0 chr2RHet 571206 571301 -2717460 + DMCR1A LINE CR1 4239 4333 -137 2 589 558 214 94 27 chr2RHet 571293 571442 -2717319 - MDG1_I LTR Gypsy -2538 4058 3900 2 589 1338 292 90 39 chr2RHet 571459 572282 -2716479 - TOM_I LTR Gypsy -571 5541 4677 2 589 3143 316 8 7 chr2RHet 575108 576303 -2712458 - Gypsy5_I LTR Gypsy -2967 3542 2347 2 589 261 98 0 0 chr2RHet 578374 578415 -2710346 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 2 589 3343 35 0 2 chr2RHet 579053 579453 -2709308 + STALKER4_LTR LTR Gypsy 1 399 -3 2 589 28 48 0 0 chr2RHet 579576 579618 -2709143 + AT_rich Low_complexity Low_complexity 1 42 0 2 589 35438 37 19 4 chr2RHet 579625 585667 -2703094 + STALKER4_I LTR Gypsy 291 6530 0 2 589 3303 53 1 14 chr2RHet 585667 586106 -2702655 + STALKER4_LTR LTR Gypsy 1 399 -3 2 589 372 333 147 10 chr2RHet 586679 586876 -2701885 + DOC2_DM LINE Jockey 2270 2493 -2300 2 589 23 33 0 0 chr2RHet 586910 586940 -2701821 + AT_rich Low_complexity Low_complexity 1 30 0 2 589 265 181 98 36 chr2RHet 586940 587021 -2701740 + DOC2_DM LINE Jockey 2620 2755 -2038 2 589 574 111 629 0 chr2RHet 587022 587184 -2701577 + DNAREP1_DM LINE Penelope 225 488 -106 2 589 297 242 15 0 chr2RHet 587305 587371 -2701390 - Gypsy6A_LTR LTR Gypsy -116 304 238 2 589 237 125 0 0 chr2RHet 587458 587498 -2701263 - TRANSIB2 DNA Transib -630 2214 2175 2 589 1952 61 0 0 chr2RHet 587498 587745 -2701016 - TRANSIB2 DNA Transib -1713 1131 885 2 589 435 31 47 0 chr2RHet 587743 587807 -2700954 - TRANSIB2 DNA Transib -2456 388 322 2 589 635 114 156 30 chr2RHet 587822 587957 -2700804 - TRANSIB2 DNA Transib -2692 152 1 2 589 231 299 0 0 chr2RHet 589165 589232 -2699529 - DMRT1C LINE R1 -1256 4187 4121 2 589 5447 63 40 6 chr2RHet 589890 590671 -2698090 + M4DM DNA Transib 629 1435 0 2 589 1510 149 27 0 chr2RHet 590816 591078 -2697683 - DMCR1A LINE CR1 -276 4194 3926 2 589 1258 169 46 4 chr2RHet 591095 591333 -2697428 - DMCR1A LINE CR1 -630 3840 3593 2 589 394 0 0 162 chr2RHet 591339 591963 -2696798 + (TATAG)n Simple_repeat Simple_repeat 1 522 0 2 589 431 331 0 0 chr2RHet 591830 592002 -2696759 + (TTAGGG)n Simple_repeat Simple_repeat 3 174 0 2 589 1269 103 0 108 chr2RHet 592026 592277 -2696484 - DIVER_LTR LTR Pao 0 224 1 2 589 25538 147 55 55 chr2RHet 592277 597921 -2690840 - DIVER_I LTR Pao 0 5643 1 2 589 1287 103 0 97 chr2RHet 597942 598190 -2690571 - DIVER_LTR LTR Pao 0 224 1 2 589 224 0 0 162 chr2RHet 598207 598417 -2690344 + (TATAG)n Simple_repeat Simple_repeat 3 178 0 2 589 394 0 0 162 chr2RHet 598489 598909 -2689852 + (TATAG)n Simple_repeat Simple_repeat 1 352 0 2 589 3747 294 6 6 chr2RHet 599083 600199 -2688562 + Gypsy6_I LTR Gypsy 5896 7011 -1 2 589 1875 78 25 67 chr2RHet 600202 600517 -2688244 + Gypsy6A_LTR LTR Gypsy 1 302 -118 2 589 4058 42 142 0 chr2RHet 600578 601481 -2687280 + DMCR1A LINE CR1 3440 4470 0 2 589 2107 41 0 0 chr2RHet 601558 601804 -2686957 + Baggins1 LINE LOA 13 258 -5195 2 589 3163 27 35 0 chr2RHet 601956 602328 -2686433 - DIVER2_LTR LTR Pao 0 385 1 2 589 283 305 30 30 chr2RHet 602642 602811 -2685950 + Gypsy6_I LTR Gypsy 4538 4706 -2306 2 589 22 70 0 0 chr2RHet 603395 603438 -2685323 + AT_rich Low_complexity Low_complexity 1 43 0 2 589 1001 161 6 6 chr2RHet 603822 604003 -2684758 - DNAREP1_DM LINE Penelope -413 181 1 2 589 382 127 28 0 chr2RHet 604000 604071 -2684690 + DMCR1A LINE CR1 4327 4399 -71 2 589 385 235 29 0 chr2RHet 604161 604263 -2684498 - DMCR1A LINE CR1 -3899 571 467 2 589 918 101 106 5 chr2RHet 604277 604455 -2684306 - DNAREP1_DM LINE Penelope -6 588 345 2 589 36 40 0 0 chr2RHet 605878 605928 -2682833 + AT_rich Low_complexity Low_complexity 1 50 0 2 589 425 212 50 25 chr2RHet 606125 606246 -2682515 + DNAREP1_DM LINE Penelope 170 293 -301 2 589 423 173 37 0 chr2RHet 606321 606402 -2682359 - DMRT1B LINE R1 -1751 3432 3349 2 589 1551 0 11 22 chr2RHet 606403 606586 -2682175 - ACCORD2_LTR LTR Gypsy -24 191 11 2 589 761 39 96 0 chr2RHet 606590 606694 -2682067 - ACCORD2_I LTR Gypsy -16 7196 7083 2 589 7897 57 48 37 chr2RHet 606680 608114 -2680647 - ACCORD2_I LTR Gypsy -5523 1689 5 2 589 373 188 165 0 chr2RHet 608105 608190 -2680571 + DNAREP1_DM LINE Penelope 434 532 -62 2 589 242 36 0 0 chr2RHet 608191 608219 -2680542 + DNAREP1_DM LINE Penelope 564 591 -3 2 589 2018 131 185 8 chr2RHet 608373 608915 -2679846 - DNAREP1_DM LINE Penelope -50 544 23 2 589 653 145 378 5 chr2RHet 610179 610438 -2678323 + DNAREP1_DM LINE Penelope 106 585 -9 2 589 31 68 0 0 chr2RHet 610474 610533 -2678228 + AT_rich Low_complexity Low_complexity 1 59 0 2 589 347 252 25 25 chr2RHet 610696 610855 -2677906 + TV1I LTR Gypsy 4670 4828 -1135 2 589 448 117 51 25 chr2RHet 611161 611240 -2677521 + DNAREP1_DM LINE Penelope 6 86 -508 2 589 934 70 203 0 chr2RHet 611231 611374 -2677387 + DNAREP1_DM LINE Penelope 423 594 0 2 589 3571 53 20 5 chr2RHet 612073 612687 -2676074 - DMCR1A LINE CR1 0 4470 3815 2 589 2910 31 6 0 chr2RHet 612687 613037 -2675724 + G5_DM LINE Jockey 4505 4856 0 2 589 969 41 0 0 chr2RHet 613038 613159 -2675602 - DMCR1A LINE CR1 -642 3828 3708 2 589 4917 61 8 25 chr2RHet 613155 613826 -2674935 - DMCR1A LINE CR1 -989 3481 2823 2 589 1819 50 222 0 chr2RHet 613826 614226 -2674535 - DMCR1A LINE CR1 -1870 2600 2112 2 589 13974 59 59 17 chr2RHet 614223 616150 -2672611 - DMCR1A LINE CR1 -2461 2009 2 2 589 266 237 118 0 chr2RHet 616171 616247 -2672514 + Gypsy_DS LTR Gypsy 3248 3332 -4190 2 589 413 133 102 0 chr2RHet 616192 616290 -2672471 + TLD2 Unknown Unknown 7 114 -104 2 589 55 16 0 0 chr2RHet 616290 616352 -2672409 + AT_rich Low_complexity Low_complexity 1 62 0 2 589 660 81 18 0 chr2RHet 616352 616463 -2672298 + TLD2 Unknown Unknown 106 218 0 2 589 24 32 0 0 chr2RHet 616549 616580 -2672181 + AT_rich Low_complexity Low_complexity 1 31 0 2 589 6966 70 38 4 chr2RHet 616580 617533 -2671228 + DMCR1A LINE CR1 3274 4258 -212 2 589 1113 64 14 0 chr2RHet 617546 617687 -2671074 + DMCR1A LINE CR1 4328 4470 0 2 589 264 261 14 0 chr2RHet 618357 618426 -2670335 - DMCR1A LINE CR1 -1 4469 4400 2 589 238 306 0 0 chr2RHet 618662 618724 -2670037 + DOC4_DM LINE Jockey 1274 1335 -1456 2 589 637 230 125 27 chr2RHet 618980 619321 -2669440 - GTWIN_I LTR Gypsy -4695 1726 1291 2 589 696 11 0 22 chr2RHet 619321 619410 -2669351 + TRANSIB2 DNA Transib 1 87 -2757 2 589 11124 22 0 1 chr2RHet 619432 620737 -2668024 + TRANSIB2 DNA Transib 366 1669 -1175 2 589 2172 30 37 0 chr2RHet 620736 621006 -2667755 + TRANSIB2 DNA Transib 2565 2844 0 2 589 2279 217 132 13 chr2RHet 621007 621775 -2666986 - GTWIN_I LTR Gypsy -5127 1294 435 2 589 41 36 0 0 chr2RHet 621940 621995 -2666766 + AT_rich Low_complexity Low_complexity 1 55 0 2 589 244 86 0 0 chr2RHet 622071 622106 -2666655 - Gypsy_I LTR Gypsy -6411 96 62 2 589 584 236 49 71 chr2RHet 622216 622440 -2666321 - GTWIN_LTR LTR Gypsy -120 375 157 2 589 277 83 0 0 chr2RHet 622530 622566 -2666195 - DMCR1A LINE CR1 -2859 1611 1576 2 589 893 80 22 7 chr2RHet 622741 622880 -2665881 + DNAREP1_DM LINE Penelope 190 330 -264 2 589 4006 35 16 6 chr2RHet 622886 623376 -2665385 + PROTOP DNA P 2 496 -3984 2 589 825 56 9 0 chr2RHet 623373 623480 -2665281 + PROTOP DNA P 4370 4479 -1 2 589 1623 128 100 67 chr2RHet 624502 624863 -2663898 - STALKER4_LTR LTR Gypsy -29 373 1 2 589 540 142 23 58 chr2RHet 624863 625035 -2663726 - STALKER4_I LTR Gypsy 0 6530 6365 2 589 28 29 0 0 chr2RHet 625068 625103 -2663658 + AT_rich Low_complexity Low_complexity 1 35 0 2 589 3892 77 0 0 chr2RHet 625114 625645 -2663116 - STALKER4_I LTR Gypsy -3137 3393 2863 2 589 10268 118 22 0 chr2RHet 625638 627386 -2661375 - STALKER4_I LTR Gypsy -4360 3042 886 2 589 3468 85 3 25 chr2RHet 627857 628622 -2660139 - STALKER4_I LTR Gypsy -5641 889 22 2 589 1638 130 97 66 chr2RHet 628673 629035 -2659726 - STALKER4_LTR LTR Gypsy -29 373 1 2 589 3503 171 76 8 chr2RHet 629189 629837 -2658924 + GTWIN_I LTR Gypsy 3339 4030 -2391 2 589 17463 47 61 15 chr2RHet 629836 632317 -2656444 + DMCR1A LINE CR1 7 2600 -1870 2 589 4085 107 51 9 chr2RHet 632317 632959 -2655802 + DMCR1A LINE CR1 2823 3491 -979 2 589 1626 77 14 0 chr2RHet 632973 633193 -2655568 + DMCR1A LINE CR1 3575 3797 -673 2 589 706 224 112 56 chr2RHet 633192 633461 -2655300 + TIRANT_LTR LTR Gypsy 51 334 -83 2 589 904 90 392 5 chr2RHet 633638 633828 -2654933 + DNAREP1_DM LINE Penelope 190 454 -140 2 589 852 76 0 199 chr2RHet 633828 634009 -2654752 - PROTOP DNA P 0 4480 4336 2 589 1112 22 60 0 chr2RHet 634006 634140 -2654621 - PROTOP DNA P -4338 142 1 2 589 246 262 0 0 chr2RHet 634336 634397 -2654364 - DM1731_I LTR Copia -1301 2675 2615 2 589 664 155 76 21 chr2RHet 634524 634724 -2654037 - DNAREP1_DM LINE Penelope -259 335 89 2 589 1657 100 42 18 chr2RHet 634708 634992 -2653769 - DNAREP1_DM LINE Penelope -301 293 3 2 589 767 276 40 30 chr2RHet 635283 635582 -2653179 - DM1731_I LTR Copia -935 3041 2740 2 589 51 0 0 0 chr2RHet 635982 636033 -2652728 + AT_rich Low_complexity Low_complexity 1 51 0 2 589 22 0 0 0 chr2RHet 637250 637272 -2651489 + AT_rich Low_complexity Low_complexity 1 22 0 2 589 1078 333 51 55 chr2RHet 637523 637963 -2650798 + Gypsy4_I LTR Gypsy 2320 2815 -3606 2 589 1383 61 19 0 chr2RHet 637963 638177 -2650584 + TLD2 Unknown Unknown 1 218 0 2 589 1078 333 51 55 chr2RHet 638177 638815 -2649946 + Gypsy4_I LTR Gypsy 2816 3538 -2883 2 589 271 284 35 35 chr2RHet 639077 639190 -2649571 + Gypsy6_I LTR Gypsy 4602 4714 -2298 2 589 227 191 73 73 chr2RHet 639359 639427 -2649334 + Gypsy4_I LTR Gypsy 4324 4391 -1897 2 589 25 0 0 0 chr2RHet 639772 639797 -2648964 + AT_rich Low_complexity Low_complexity 1 25 0 2 589 2426 27 51 0 chr2RHet 640228 640524 -2648237 + IVK_DM LINE I 1 311 -5091 2 589 3747 58 6 0 chr2RHet 640521 641017 -2647744 + IVK_DM LINE I 777 1275 -4127 2 589 4981 57 22 5 chr2RHet 641040 641711 -2647050 + IVK_DM LINE I 1538 2220 -3182 2 589 23389 45 9 3 chr2RHet 641717 644621 -2644140 + IVK_DM LINE I 2482 5402 0 2 589 31 82 0 0 chr2RHet 645093 645166 -2643595 + AT_rich Low_complexity Low_complexity 1 73 0 2 589 322 246 0 0 chr2RHet 646172 646237 -2642524 + DIVER2_I LTR Pao 4082 4146 -1 2 589 760 258 211 15 chr2RHet 646582 647043 -2641718 + BEL_I LTR Pao 1726 2276 -3128 2 589 1142 239 107 0 chr2RHet 647072 647390 -2641371 + BEL_I LTR Pao 2328 2679 -2725 2 589 300 226 7 62 chr2RHet 647654 647800 -2640961 + A-rich Low_complexity Low_complexity 4 141 0 2 589 25 0 0 0 chr2RHet 649217 649242 -2639519 + AT_rich Low_complexity Low_complexity 1 25 0 2 589 268 281 73 73 chr2RHet 649824 650001 -2638760 - Gypsy6_I LTR Gypsy -2298 4714 4538 2 589 41561 8 3 0 chr2RHet 650344 655023 -2633738 + FW_DM LINE Jockey 1 4691 -1 2 73 681 304 26 68 chr2RHet 655291 655927 -2632834 - GTWIN_I LTR Gypsy -2798 3709 3026 2 590 588 14 0 0 chr2RHet 655927 656000 -2632761 - TLD2 Unknown Unknown 0 218 146 2 590 24792 10 26 1 chr2RHet 655998 658853 -2629908 + DOC2_DM LINE Jockey 1869 4793 0 2 590 1108 13 33 0 chr2RHet 658857 659010 -2629751 - TLD2 Unknown Unknown -60 158 1 2 590 679 337 23 16 chr2RHet 658933 659422 -2629339 - GTWIN_I LTR Gypsy -3769 3243 2296 2 590 23 0 0 0 chr2RHet 659702 659725 -2629036 + AT_rich Low_complexity Low_complexity 1 23 0 2 590 412 338 37 42 chr2RHet 660622 661171 -2627590 - GTWIN_I LTR Gypsy -5228 1784 919 2 590 32 43 0 0 chr2RHet 662052 662098 -2626663 + AT_rich Low_complexity Low_complexity 1 46 0 2 590 24 0 0 0 chr2RHet 662793 662817 -2625944 + AT_rich Low_complexity Low_complexity 1 24 0 2 590 29 0 0 0 chr2RHet 662996 663025 -2625736 + AT_rich Low_complexity Low_complexity 1 29 0 2 590 539 166 447 0 chr2RHet 663793 663925 -2624836 + DMCR1A LINE CR1 1951 2141 -2329 2 590 535 249 76 41 chr2RHet 664102 664274 -2624487 + BS2 LINE Jockey 2572 2749 -1972 2 590 255 261 10 83 chr2RHet 664325 664421 -2624340 + BS2 LINE Jockey 3009 3097 -1624 2 590 1410 126 101 12 chr2RHet 664607 664865 -2623896 - PROTOP_B DNA P 0 1153 873 2 590 1070 135 228 4 chr2RHet 664932 665178 -2623583 - PROTOP_B DNA P -853 300 1 2 590 948 126 65 12 chr2RHet 666125 666294 -2622467 - Gypsy12A_LTR LTR Gypsy -148 2132 1955 2 590 1482 130 37 37 chr2RHet 666291 666619 -2622142 - Gypsy12A_LTR LTR Gypsy -1071 1209 882 2 590 321 152 0 0 chr2RHet 670018 670077 -2618684 + DNAREP1_DM LINE Penelope 1 59 -535 2 590 23 54 0 0 chr2RHet 670114 670151 -2618610 + AT_rich Low_complexity Low_complexity 1 37 0 2 590 3176 144 51 7 chr2RHet 671570 672158 -2616603 + DMCR1A LINE CR1 1775 2388 -2082 2 590 5939 145 166 2 chr2RHet 672192 673503 -2615258 + DMCR1A LINE CR1 2500 4026 -444 2 590 799 99 0 24 chr2RHet 673549 673673 -2615088 + DMCR1A LINE CR1 1094 1214 -3256 2 590 24 32 0 0 chr2RHet 673692 673723 -2615038 + AT_rich Low_complexity Low_complexity 1 31 0 2 590 2959 56 138 0 chr2RHet 674025 674473 -2614288 + DMCR1A LINE CR1 3938 4447 -23 2 590 291 245 70 70 chr2RHet 674589 674747 -2614014 - TIRANT_I LTR Gypsy -3957 3735 3578 2 590 236 324 0 0 chr2RHet 676016 676087 -2612674 - Gypsy3_I LTR Gypsy -4888 1289 1219 2 590 21 0 0 0 chr2RHet 676087 676108 -2612653 + AT_rich Low_complexity Low_complexity 1 21 0 2 590 13015 43 55 14 chr2RHet 676347 678172 -2610589 + DOC3_DM LINE Jockey 647 2547 -2193 2 590 545 79 0 13 chr2RHet 678174 678251 -2610510 + DOC3_DM LINE Jockey 2667 2742 -1998 2 590 3026 66 0 19 chr2RHet 678249 678664 -2610097 + DMCR1A LINE CR1 1603 2009 -2461 2 590 1742 50 222 0 chr2RHet 678661 679061 -2609700 + DMCR1A LINE CR1 2112 2600 -1870 2 590 4727 61 8 16 chr2RHet 679061 679728 -2609033 + DMCR1A LINE CR1 2823 3483 -987 2 590 817 68 0 0 chr2RHet 679721 679838 -2608923 + DMCR1A LINE CR1 3708 3824 -646 2 590 2771 34 6 0 chr2RHet 679840 680190 -2608571 - G5_DM LINE Jockey 0 4856 4505 2 590 4207 48 71 2 chr2RHet 680190 680778 -2607983 + DMCR1A LINE CR1 3815 4443 -27 2 590 2879 3 0 0 chr2RHet 680778 681108 -2607653 + TRANSPAC_LTR LTR Gypsy 1 330 0 2 590 35925 2 0 1 chr2RHet 681108 685356 -2603405 + TRANSPAC_I LTR Gypsy 1 4245 -345 2 590 3166 0 0 0 chr2RHet 685356 685717 -2603044 + BEL_LTR LTR Pao 1 361 0 2 590 47630 0 0 0 chr2RHet 685717 691122 -2597639 + BEL_I LTR Pao 1 5404 0 2 590 3166 0 0 0 chr2RHet 691122 691483 -2597278 + BEL_LTR LTR Pao 1 361 0 2 590 2814 6 0 0 chr2RHet 691483 691833 -2596928 + TRANSPAC_I LTR Gypsy 4241 4590 0 2 590 2879 3 0 0 chr2RHet 691832 692162 -2596599 + TRANSPAC_LTR LTR Gypsy 1 330 0 2 590 229 62 0 0 chr2RHet 692162 692194 -2596567 + DMCR1A LINE CR1 4439 4470 0 2 590 434 62 0 44 chr2RHet 692458 692526 -2596235 - DNAREP1_DM LINE Penelope -96 498 434 2 590 594 93 27 27 chr2RHet 692551 692661 -2596100 - DNAREP1_DM LINE Penelope -303 291 182 2 590 22 0 0 0 chr2RHet 692661 692683 -2596078 + AT_rich Low_complexity Low_complexity 1 22 0 2 590 610 120 0 9 chr2RHet 692683 692792 -2595969 - DNAREP1_DM LINE Penelope -333 261 154 2 590 1098 72 24 6 chr2RHet 693034 693202 -2595559 - DM297_LTR LTR Gypsy 0 414 244 2 590 1453 178 147 23 chr2RHet 693222 693794 -2594967 + Gypsy10_I LTR Gypsy 1958 2600 -2678 2 590 315 151 0 0 chr2RHet 694013 694066 -2594695 + Gypsy10_I LTR Gypsy 2667 2719 -2559 2 590 249 109 0 0 chr2RHet 694099 694145 -2594616 + (A)n Simple_repeat Simple_repeat 1 46 0 2 590 6283 169 39 13 chr2RHet 694146 695609 -2593152 + FW_DM LINE Jockey 266 2193 -2499 2 590 2123 138 263 2 chr2RHet 695606 696058 -2592703 + FW_DM LINE Jockey 2358 2927 -1765 2 590 1356 169 61 8 chr2RHet 696045 696375 -2592386 + FW_DM LINE Jockey 4312 4713 -12 2 590 280 211 0 0 chr2RHet 696383 696440 -2592321 + Gypsy4_I LTR Gypsy 2526 2582 -3706 2 590 810 201 128 4 chr2RHet 696478 696713 -2592048 + Gypsy10_I LTR Gypsy 2918 3181 -2097 2 590 338 214 0 0 chr2RHet 696712 696782 -2591979 + Gypsy10_I LTR Gypsy 3283 3352 -1926 2 590 352 315 89 10 chr2RHet 696871 697073 -2591688 + Gypsy4_I LTR Gypsy 3358 3575 -2713 2 590 254 143 179 0 chr2RHet 697428 697484 -2591277 - DNAREP1_DM LINE Penelope -509 85 20 2 590 296 321 58 16 chr2RHet 697917 698107 -2590654 - ROO_I LTR Pao -776 7480 7283 2 590 615 299 40 15 chr2RHet 698124 698528 -2590233 - ROO_I LTR Pao -1294 6962 6549 2 590 1058 166 9 39 chr2RHet 698614 698846 -2589915 - Invader2_LTR LTR Gypsy 0 266 42 2 590 589 197 30 71 chr2RHet 699031 699200 -2589561 - Gypsy2_LTR LTR Gypsy -191 162 1 2 590 401 283 8 0 chr2RHet 699201 699321 -2589440 - Gypsy2_I LTR Gypsy -9 6126 6006 2 590 283 280 38 12 chr2RHet 699446 699599 -2589162 - G6_DM LINE Jockey -183 1859 1768 2 590 268 293 0 0 chr2RHet 700013 700088 -2588673 - Gypsy6_I LTR Gypsy -172 6840 6766 2 590 856 192 0 12 chr2RHet 700201 700370 -2588391 - Gypsy2_I LTR Gypsy -743 5392 5226 2 590 2075 89 0 7 chr2RHet 700385 700690 -2588071 + DMRT1C LINE R1 561 863 -4580 2 590 662 140 18 0 chr2RHet 700680 700794 -2587967 + DMRT1C LINE R1 1253 1368 -4075 2 590 10756 81 134 9 chr2RHet 700794 702731 -2586030 + DMRT1C LINE R1 1751 3930 -1513 2 590 2764 57 146 1 chr2RHet 702716 703573 -2585188 + DOC3_DM LINE Jockey 1150 2226 -2514 2 590 7077 50 131 2 chr2RHet 703560 705427 -2583334 + DOC3_DM LINE Jockey 2632 4740 0 2 590 5749 83 31 12 chr2RHet 705427 706290 -2582471 + DMRT1C LINE R1 3921 4800 -643 2 590 554 110 168 8 chr2RHet 706283 706402 -2582359 + DMRT1C LINE R1 5306 5443 0 2 590 2124 269 38 17 chr2RHet 706403 707106 -2581655 - Gypsy2_I LTR Gypsy -922 5213 4496 2 590 553 237 111 0 chr2RHet 707119 707254 -2581507 - Gypsy2_I LTR Gypsy -1732 4403 4254 2 590 480 298 6 6 chr2RHet 707265 707424 -2581337 - Gypsy3_I LTR Gypsy -1981 4196 4038 2 590 968 186 6 0 chr2RHet 707425 707597 -2581164 - Gypsy2_I LTR Gypsy -2689 3446 3274 2 590 1199 210 174 2 chr2RHet 707599 708025 -2580736 - Gypsy2_I LTR Gypsy -2982 3153 2815 2 590 545 175 254 24 chr2RHet 708027 708208 -2580553 - Gypsy2_I LTR Gypsy -3807 2328 2106 2 590 28 0 0 0 chr2RHet 708209 708237 -2580524 + AT_rich Low_complexity Low_complexity 1 28 0 2 590 798 162 116 19 chr2RHet 708307 708514 -2580247 + DNAREP1_DM LINE Penelope 14 240 -354 2 590 6748 153 63 68 chr2RHet 708540 710171 -2578590 + DMCR1A LINE CR1 7 1629 -2841 2 590 421 239 55 75 chr2RHet 710188 710387 -2578374 + GTWIN_LTR LTR Gypsy 181 375 -120 2 590 208 241 0 0 chr2RHet 710595 710653 -2578108 + A-rich Low_complexity Low_complexity 1 58 0 2 590 3626 2 0 0 chr2RHet 710763 711187 -2577574 - Stalker2_LTR LTR Gypsy 0 424 1 2 590 51484 14 5 2 chr2RHet 711187 717988 -2570773 - Stalker2_I LTR Gypsy 0 6530 1 2 590 3626 2 0 0 chr2RHet 717988 718412 -2570349 - Stalker2_LTR LTR Gypsy 0 424 1 2 590 3993 206 117 17 chr2RHet 718464 719683 -2569078 + GTWIN_I LTR Gypsy 435 1875 -4546 2 590 4274 168 159 5 chr2RHet 719719 721018 -2567743 + GTWIN_I LTR Gypsy 2532 4030 -2391 2 590 1509 51 5 9 chr2RHet 721017 721235 -2567526 + DMCR1A LINE CR1 7 223 -4247 2 590 10604 47 55 11 chr2RHet 721232 722678 -2566083 + DMCR1A LINE CR1 337 1845 -2625 2 590 5006 52 2 2 chr2RHet 722676 723309 -2565452 + DMCR1A LINE CR1 1968 2600 -1870 2 590 11337 57 63 20 chr2RHet 723309 724889 -2563872 + DMCR1A LINE CR1 2823 4470 0 2 590 260 136 0 0 chr2RHet 724898 724957 -2563804 - PROTOP_B DNA P -429 724 666 2 590 344 156 0 53 chr2RHet 724978 725073 -2563688 - PROTOP_B DNA P -772 381 292 2 590 21 36 0 0 chr2RHet 725073 725101 -2563660 + AT_rich Low_complexity Low_complexity 1 28 0 2 590 271 238 48 36 chr2RHet 725309 725392 -2563369 - IVK_DM LINE I -2026 3376 3293 2 590 207 0 0 0 chr2RHet 725396 725419 -2563342 + (T)n Simple_repeat Simple_repeat 1 23 0 2 590 274 119 0 0 chr2RHet 725584 725626 -2563135 + DNAREP1_DM LINE Penelope 542 583 -11 2 590 55 0 0 0 chr2RHet 727589 727644 -2561117 + AT_rich Low_complexity Low_complexity 1 55 0 2 590 416 31 354 0 chr2RHet 728724 728789 -2559972 - DNAREP1_DM LINE Penelope -3 591 504 2 590 1363 93 37 70 chr2RHet 728847 729089 -2559672 - DNAREP1_DM LINE Penelope 0 594 361 2 590 270 100 0 0 chr2RHet 730048 730088 -2558673 - BARI1 DNA Tc1 -1708 42 3 2 590 4872 5 35 0 chr2RHet 730056 730630 -2558131 + IDEFIX_LTR LTR Gypsy 1 594 0 2 590 25 0 0 0 chr2RHet 730820 730845 -2557916 + AT_rich Low_complexity Low_complexity 1 25 0 2 590 48120 10 2 1 chr2RHet 731303 736925 -2551836 + IDEFIX_I LTR Gypsy 1 5628 0 2 590 4970 22 2 2 chr2RHet 736925 737519 -2551242 + IDEFIX_LTR LTR Gypsy 1 594 0 2 590 27 87 0 0 chr2RHet 737629 737698 -2551063 + AT_rich Low_complexity Low_complexity 1 69 0 2 590 28 61 0 0 chr2RHet 738081 738130 -2550631 + AT_rich Low_complexity Low_complexity 1 49 0 2 590 30 59 0 0 chr2RHet 738432 738483 -2550278 + AT_rich Low_complexity Low_complexity 1 51 0 2 590 1359 96 166 15 chr2RHet 739503 739768 -2548993 + DNAREP1_DM LINE Penelope 3 307 -287 2 590 8187 42 46 0 chr2RHet 739782 740856 -2547905 - DOC5_DM LINE Jockey -90 4592 3470 2 590 981 48 0 176 chr2RHet 740866 741070 -2547691 - DOC5_DM LINE Jockey -1523 3159 2992 2 590 246 118 0 38 chr2RHet 741099 741152 -2547609 + Invader5_LTR LTR Gypsy 2 52 -300 2 590 636 278 0 0 chr2RHet 741151 741313 -2547448 + Invader5_I LTR Gypsy 903 1064 -2122 2 590 5023 163 83 76 chr2RHet 741758 743322 -2545439 + Invader5_I LTR Gypsy 1456 3334 0 2 590 1747 100 8 0 chr2RHet 743347 743597 -2545164 - DMCR1A LINE CR1 0 4470 4219 2 590 412 333 61 78 chr2RHet 746448 747630 -2541131 + BLASTOPIA_I LTR Gypsy 2178 3475 -1413 2 590 341 348 80 50 chr2RHet 747966 748879 -2539882 + BLASTOPIA_I LTR Gypsy 3541 4480 -1 2 590 2183 61 13 13 chr2RHet 749189 749486 -2539275 - DMCR1A LINE CR1 -251 4219 3923 2 590 4934 20 64 3 chr2RHet 749486 750527 -2538234 + PROTOP_A DNA P 1 1105 0 2 590 9031 64 63 2 chr2RHet 750551 751779 -2536982 - DMCR1A LINE CR1 -605 3865 2562 2 590 2351 74 34 6 chr2RHet 751777 752104 -2536657 + Invader5_LTR LTR Gypsy 17 352 0 2 590 5652 53 26 0 chr2RHet 752524 753291 -2535470 + I_DM LINE I 116 902 -5329 2 590 267 114 13 67 chr2RHet 753287 753362 -2535399 + I_DM LINE I 1185 1255 -4976 2 590 3481 60 38 19 chr2RHet 753338 753867 -2534894 + I_DM LINE I 1373 1911 -4320 2 590 11247 55 6 7 chr2RHet 754107 755639 -2533122 + I_DM LINE I 1907 3436 -2795 2 590 3481 144 143 8 chr2RHet 755670 756758 -2532003 - DMCR1A LINE CR1 -1586 2884 1652 2 590 810 228 177 82 chr2RHet 756869 757204 -2531557 - GTWIN_LTR LTR Gypsy -90 405 29 2 590 1382 173 287 0 chr2RHet 757223 757717 -2531044 - DMCR1A LINE CR1 -3650 820 185 2 590 716 180 18 228 chr2RHet 758897 759178 -2529583 + Gypsy8_LTR LTR Gypsy 1 304 0 2 590 366 176 77 0 chr2RHet 759166 759257 -2529504 + Gypsy8_I LTR Gypsy 1 98 -4249 2 590 544 228 18 124 chr2RHet 759307 759532 -2529229 + TIRANT_LTR LTR Gypsy 109 309 -108 2 590 180 0 0 0 chr2RHet 759690 759710 -2529051 + (GGAA)n Simple_repeat Simple_repeat 2 21 0 2 590 1247 47 0 0 chr2RHet 760304 760454 -2528307 - ROOA_LTR LTR Pao 0 386 237 2 590 395 324 8 8 chr2RHet 760948 761172 -2527589 + BURDOCK_I LTR Gypsy 850 992 -4868 2 590 479 327 25 30 chr2RHet 762694 763101 -2525660 + Gypsy6_I LTR Gypsy 2920 3575 -2954 2 590 4219 307 28 39 chr2RHet 763338 765989 -2522772 - FROGGER_I LTR Copia -130 4032 407 2 590 367 292 0 0 chr2RHet 766752 766858 -2521903 - FROGGER_I LTR Copia -3490 672 567 2 590 4239 308 28 39 chr2RHet 767658 770309 -2518452 - FROGGER_I LTR Copia -130 4032 407 2 590 367 292 0 0 chr2RHet 771072 771178 -2517583 - FROGGER_I LTR Copia -3490 672 567 2 590 4150 307 35 39 chr2RHet 771978 774593 -2514168 - FROGGER_I LTR Copia -130 4032 407 2 590 367 292 0 0 chr2RHet 775356 775462 -2513299 - FROGGER_I LTR Copia -3490 672 567 2 590 892 335 53 48 chr2RHet 776230 776273 -2512488 + Gypsy4_I LTR Gypsy 2576 2631 -3657 2 590 1609 9 24 0 chr2RHet 776273 776486 -2512275 + TLD2 Unknown Unknown 1 218 0 2 590 892 335 53 48 chr2RHet 776486 777124 -2511637 + Gypsy4_I LTR Gypsy 2632 3473 -2815 2 590 256 312 40 40 chr2RHet 777631 777808 -2510953 + Gypsy6_I LTR Gypsy 4538 4714 -2298 2 590 24 0 0 0 chr2RHet 778404 778428 -2510333 + AT_rich Low_complexity Low_complexity 1 24 0 2 590 39341 47 27 6 chr2RHet 778811 784101 -2504660 + IVK_DM LINE I 1 5402 0 2 590 31 82 0 0 chr2RHet 784586 784659 -2504102 + AT_rich Low_complexity Low_complexity 1 73 0 2 590 302 246 0 0 chr2RHet 785665 785730 -2503031 + DIVER2_I LTR Pao 4082 4146 -1 2 73 764 256 201 15 chr2RHet 786075 786540 -2502221 + BEL_I LTR Pao 1726 2276 -3128 2 591 1039 239 107 0 chr2RHet 786569 786887 -2501874 + BEL_I LTR Pao 2328 2679 -2725 2 591 300 226 7 62 chr2RHet 787151 787297 -2501464 + A-rich Low_complexity Low_complexity 4 141 0 2 591 246 81 0 0 chr2RHet 787668 787705 -2501056 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2 591 765 302 29 18 chr2RHet 789821 790206 -2498555 + Gypsy5_I LTR Gypsy 2206 2594 -3915 2 591 364 308 0 0 chr2RHet 790285 790418 -2498343 + Gypsy5_I LTR Gypsy 2888 3020 -3489 2 591 261 325 18 18 chr2RHet 790440 790606 -2498155 + ZAM_I LTR Gypsy 5491 5656 -1834 2 591 491 299 140 19 chr2RHet 792149 792463 -2496298 + BEL_I LTR Pao 2891 3242 -2162 2 591 1043 108 305 6 chr2RHet 792556 792871 -2495890 + DNAREP1_DM LINE Penelope 183 591 -3 2 591 934 68 27 7 chr2RHet 793634 793782 -2494979 - M4DM DNA Transib 0 1435 1285 2 591 268 261 42 35 chr2RHet 793799 793942 -2494819 - M4DM DNA Transib -502 933 790 2 591 5407 160 88 6 chr2RHet 794193 795352 -2493409 + DMCR1A LINE CR1 1850 3103 -1367 2 591 257 219 47 0 chr2RHet 795368 795432 -2493329 + DMCR1A LINE CR1 3361 3427 -1043 2 591 289 167 67 0 chr2RHet 795572 795632 -2493129 + DMCR1A LINE CR1 3777 3840 -630 2 591 27 62 0 0 chr2RHet 797321 797369 -2491392 + AT_rich Low_complexity Low_complexity 1 48 0 2 591 1474 145 16 0 chr2RHet 797754 798072 -2490689 + S2_DM DNA Tc1 1410 1732 -3 2 591 24 32 0 0 chr2RHet 798072 798103 -2490658 + AT_rich Low_complexity Low_complexity 1 31 0 2 591 935 161 89 31 chr2RHet 798448 798705 -2490056 + DMCR1A LINE CR1 9 280 -4190 2 591 1325 171 64 0 chr2RHet 798705 798986 -2489775 + DMCR1A LINE CR1 528 826 -3644 2 591 237 180 0 0 chr2RHet 798973 799023 -2489738 + DMCR1A LINE CR1 577 626 -3844 2 591 244 284 86 8 chr2RHet 799983 800100 -2488661 + MDG1_LTR LTR Gypsy 154 279 -163 2 591 258 111 22 0 chr2RHet 800207 800252 -2488509 + Gypsy6_LTR LTR Gypsy 251 296 -111 2 591 1275 157 123 20 chr2RHet 800295 800694 -2488067 + DM412B_LTR LTR Gypsy 1 440 -131 2 591 1704 294 28 24 chr2RHet 801284 802024 -2486737 + GTWIN_I LTR Gypsy 641 1944 -5578 2 591 295 222 24 24 chr2RHet 802369 802452 -2486309 + Gypsy_I LTR Gypsy 1918 2000 -4507 2 591 5569 300 49 7 chr2RHet 802620 804913 -2483848 + GTWIN_I LTR Gypsy 2521 4909 -1512 2 591 2216 7 88 0 chr2RHet 804991 805265 -2483496 - Invader3_LTR LTR Gypsy 0 298 1 2 591 40959 6 15 0 chr2RHet 805265 810082 -2478679 - Invader3_I LTR Gypsy 0 4888 1 2 591 2216 7 88 0 chr2RHet 810082 810356 -2478405 - Invader3_LTR LTR Gypsy 0 298 1 2 591 41874 6 1 0 chr2RHet 810356 815238 -2473523 - Invader3_I LTR Gypsy 0 4888 1 2 591 2203 11 88 0 chr2RHet 815238 815512 -2473249 - Invader3_LTR LTR Gypsy 0 298 1 2 591 757 325 4 1 chr2RHet 815537 815872 -2472889 + GTWIN_I LTR Gypsy 5499 5791 -1731 2 591 1091 333 48 30 chr2RHet 815880 816709 -2472052 + Gypsy_I LTR Gypsy 5660 6503 -4 2 591 244 284 86 8 chr2RHet 816762 816879 -2471882 + MDG1_LTR LTR Gypsy 154 279 -163 2 591 896 59 0 0 chr2RHet 818223 818341 -2470420 - BS3_DM LINE Jockey -1 1789 1672 2 591 1221 51 147 0 chr2RHet 818346 818523 -2470238 - BS3_DM LINE Jockey -247 1543 1341 2 591 3585 58 89 26 chr2RHet 818526 819055 -2469706 - BS3_DM LINE Jockey -1062 728 167 2 591 857 284 28 6 chr2RHet 819071 819394 -2469367 - BS2 LINE Jockey -1910 2811 2482 2 591 1874 194 42 12 chr2RHet 819398 819799 -2468962 - BS2 LINE Jockey -2600 2121 1709 2 591 318 225 76 29 chr2RHet 819839 819944 -2468817 - G5_DM LINE Jockey -4340 516 407 2 591 1451 123 108 4 chr2RHet 819993 820271 -2468490 - BS2 LINE Jockey -4404 317 11 2 591 26 30 0 0 chr2RHet 820423 820456 -2468305 + AT_rich Low_complexity Low_complexity 1 33 0 2 591 24 32 0 0 chr2RHet 821501 821532 -2467229 + AT_rich Low_complexity Low_complexity 1 31 0 2 591 7687 49 39 11 chr2RHet 821532 822577 -2466184 + DOC3_DM LINE Jockey 3190 4264 -476 2 591 4991 74 9 0 chr2RHet 822588 823266 -2465495 + G5_DM LINE Jockey 6 689 -4167 2 591 15310 45 5 5 chr2RHet 823265 825242 -2463519 + G5_DM LINE Jockey 2341 4317 -539 2 591 2027 63 105 0 chr2RHet 825243 825557 -2463204 + G5_DM LINE Jockey 4499 4845 -11 2 591 23 0 0 0 chr2RHet 825580 825603 -2463158 + AT_rich Low_complexity Low_complexity 1 23 0 2 591 5433 35 12 0 chr2RHet 825603 826294 -2462467 - DOC3_DM LINE Jockey -2972 1768 1070 2 591 21676 67 14 1 chr2RHet 826511 829607 -2459154 - I_DM LINE I -767 5464 2327 2 591 721 22 0 0 chr2RHet 829625 829713 -2459048 - DOC3_DM LINE Jockey -3768 972 885 2 591 1753 106 77 29 chr2RHet 829713 830063 -2458698 + ROVER-LTR_DM LTR Gypsy 1 367 0 2 591 1263 217 121 112 chr2RHet 830064 831212 -2457549 + ROVER-I_DM LTR Gypsy 2 1160 -5424 2 591 12519 182 2 2 chr2RHet 831207 833630 -2455131 + ROVER-I_DM LTR Gypsy 2887 5308 -1276 2 591 2735 157 40 9 chr2RHet 833665 834242 -2454519 + ROVER-I_DM LTR Gypsy 5990 6584 0 2 591 238 111 0 0 chr2RHet 834242 834278 -2454483 + ROVER-LTR_DM LTR Gypsy 1 36 -331 2 591 3150 17 0 0 chr2RHet 834289 834642 -2454119 - Gypsy2_LTR LTR Gypsy 0 353 1 2 591 1251 32 0 0 chr2RHet 834642 834796 -2453965 + ROVER-LTR_DM LTR Gypsy 50 203 -164 2 591 2941 83 11 4 chr2RHet 834793 835251 -2453510 - S_DM DNA Tc1 -1275 461 1 2 591 2407 18 3 0 chr2RHet 835265 835548 -2453213 - DOC3_DM LINE Jockey -3898 842 559 2 591 1700 40 0 9 chr2RHet 835550 835776 -2452985 - DOC3_DM LINE Jockey -4516 224 1 2 591 207 209 0 0 chr2RHet 836303 836346 -2452415 + T-rich Low_complexity Low_complexity 6 48 0 2 591 262 341 0 14 chr2RHet 836615 836755 -2452006 - ACCORD2_I LTR Gypsy -1275 5937 5800 2 591 478 81 0 98 chr2RHet 837533 837615 -2451146 - DNAREP1_DM LINE Penelope -164 430 357 2 591 253 214 0 0 chr2RHet 837652 837708 -2451053 - DNAREP1_DM LINE Penelope -534 60 5 2 591 262 194 0 75 chr2RHet 838527 838594 -2450167 - GTWIN_I LTR Gypsy -2013 4408 4347 2 591 521 188 131 59 chr2RHet 838638 838874 -2449887 - QUASIMODO_LTR LTR Gypsy -15 643 391 2 591 3070 42 5 3 chr2RHet 838874 839252 -2449509 + STALKER4_LTR LTR Gypsy 1 379 -23 2 591 28 48 0 0 chr2RHet 839390 839432 -2449329 + AT_rich Low_complexity Low_complexity 1 42 0 2 591 5869 99 59 25 chr2RHet 839439 840622 -2448139 + STALKER4_I LTR Gypsy 291 1560 -4970 2 591 41959 5 0 0 chr2RHet 840622 845316 -2443445 - DOC LINE Jockey 0 4725 32 2 591 39500 34 15 5 chr2RHet 845369 850300 -2438461 + STALKER4_I LTR Gypsy 1549 6530 0 2 591 3087 40 5 3 chr2RHet 850300 850678 -2438083 + STALKER4_LTR LTR Gypsy 1 379 -23 2 591 2398 60 6 0 chr2RHet 850728 851060 -2437701 - QUASIMODO_LTR LTR Gypsy -298 360 27 2 591 342 340 19 19 chr2RHet 851087 851294 -2437467 - Gypsy2_I LTR Gypsy -2137 3998 3847 2 591 2400 53 269 0 chr2RHet 851345 851687 -2437074 + Mariner2_DM DNA Tc1 1 435 -477 2 591 3859 31 0 2 chr2RHet 851739 852194 -2436567 + Mariner2_DM DNA Tc1 458 911 -1 2 591 1343 120 60 36 chr2RHet 852196 852447 -2436314 + DMCR1A LINE CR1 2165 2421 -2049 2 591 1229 182 56 7 chr2RHet 852460 852747 -2436014 + DNAREP1_DM LINE Penelope 2 302 -292 2 591 231 203 0 119 chr2RHet 852741 852825 -2435936 + Gypsy8_LTR LTR Gypsy 109 182 -122 2 591 180 125 0 0 chr2RHet 853583 853615 -2435146 + (TTTC)n Simple_repeat Simple_repeat 4 35 0 2 591 4478 6 0 0 chr2RHet 853624 854131 -2434630 + DM176_LTR LTR Gypsy 1 507 0 2 591 56020 1 1 5 chr2RHet 854131 854671 -2434090 + DM176_I LTR Gypsy 1 536 -5884 2 591 208 28 26 53 chr2RHet 854671 854709 -2434052 + (TAA)n Simple_repeat Simple_repeat 3 39 0 2 591 56020 1 1 5 chr2RHet 854709 860612 -2428149 + DM176_I LTR Gypsy 537 6420 0 2 591 4503 4 0 0 chr2RHet 860612 861119 -2427642 + DM176_LTR LTR Gypsy 1 507 0 2 591 236 333 25 41 chr2RHet 861354 861476 -2427285 - Gypsy5_I LTR Gypsy -3004 3505 3386 2 591 22 0 0 0 chr2RHet 862331 862353 -2426408 + AT_rich Low_complexity Low_complexity 1 22 0 2 591 570 152 107 0 chr2RHet 862398 862510 -2426251 + DNAREP1_DM LINE Penelope 1 124 -470 2 591 2475 49 81 6 chr2RHet 862567 862914 -2425847 - TRANSIB2 DNA Transib 0 2844 2472 2 591 9989 37 82 2 chr2RHet 862926 864325 -2424436 - TRANSIB2 DNA Transib -1334 1510 1 2 591 473 210 15 65 chr2RHet 865489 865651 -2423110 + Gypsy8_LTR LTR Gypsy 70 303 -1 2 591 1266 186 19 17 chr2RHet 865755 866071 -2422690 - PROTOP DNA P -17 4463 4150 2 591 390 235 52 9 chr2RHet 866069 866185 -2422576 - PROTOP DNA P -2798 1682 1562 2 591 562 263 184 43 chr2RHet 866187 866601 -2422160 - PROTOP DNA P -3155 1325 854 2 591 1096 88 218 0 chr2RHet 866619 866812 -2421949 + DNAREP1_DM LINE Penelope 359 593 -1 2 591 632 151 119 0 chr2RHet 867444 867570 -2421191 + DNAREP1_DM LINE Penelope 1 141 -453 2 591 724 175 50 121 chr2RHet 867812 868052 -2420709 + MAX_I LTR Pao 1 223 -7691 2 591 533 106 28 37 chr2RHet 868221 868329 -2420432 + DM297_LTR LTR Gypsy 297 403 -11 2 591 797 178 27 16 chr2RHet 868336 868519 -2420242 + DM297_I LTR Gypsy 1 185 -5982 2 591 1681 178 45 18 chr2RHet 868673 869130 -2419631 + DM297_I LTR Gypsy 2378 2946 -3221 2 591 40 0 0 0 chr2RHet 869130 869170 -2419591 + AT_rich Low_complexity Low_complexity 1 40 0 2 591 1124 147 10 15 chr2RHet 869170 869371 -2419390 + DM297_I LTR Gypsy 3165 3364 -2803 2 591 3924 142 93 0 chr2RHet 869369 870157 -2418604 + DM297_I LTR Gypsy 3508 4368 -1799 2 591 24 0 0 0 chr2RHet 870179 870203 -2418558 + AT_rich Low_complexity Low_complexity 1 24 0 2 591 28 0 0 0 chr2RHet 870263 870291 -2418470 + AT_rich Low_complexity Low_complexity 1 28 0 2 591 270 304 0 38 chr2RHet 870526 870632 -2418129 + TOM_I LTR Gypsy 5197 5298 -814 2 591 385 266 95 9 chr2RHet 870630 870850 -2417911 + TOM_I LTR Gypsy 5417 5710 -457 2 591 622 238 16 11 chr2RHet 870858 871038 -2417723 - Gypsy6_I LTR Gypsy -2519 4493 4338 2 591 2610 263 18 2 chr2RHet 871047 871661 -2417100 - Gypsy6_I LTR Gypsy -2582 4430 3807 2 591 10968 21 37 1 chr2RHet 871663 872969 -2415792 + FW_DM LINE Jockey 1 1353 -3339 2 591 12831 17 0 3 chr2RHet 872963 874448 -2414313 + FW_DM LINE Jockey 1599 3078 -1614 2 591 42597 1 0 0 chr2RHet 874448 879165 -2409596 + DOC LINE Jockey 11 4725 0 2 591 14387 11 0 1 chr2RHet 879185 880811 -2407950 + FW_DM LINE Jockey 3068 4692 0 2 591 3159 241 0 3 chr2RHet 880815 881509 -2407252 - Gypsy6_I LTR Gypsy -3207 3805 3114 2 591 8802 20 8 24 chr2RHet 881502 882607 -2406154 + DOC2_DM LINE Jockey 360 1447 -3346 2 591 21184 17 28 0 chr2RHet 882591 885058 -2403703 + DOC2_DM LINE Jockey 1556 4092 -701 2 591 2387 7 0 0 chr2RHet 885074 885350 -2403411 + DOC2_DM LINE Jockey 4518 4793 0 2 591 1899 318 22 15 chr2RHet 885351 886031 -2402730 - Gypsy6_I LTR Gypsy -5418 1594 910 2 591 30 45 0 0 chr2RHet 886278 886322 -2402439 + AT_rich Low_complexity Low_complexity 1 44 0 2 591 2031 75 23 42 chr2RHet 886569 886877 -2401884 - Gypsy6A_LTR LTR Gypsy -118 302 1 2 591 394 220 140 0 chr2RHet 886886 886986 -2401775 + MAX_I LTR Pao 2234 2347 -5567 2 591 230 281 11 11 chr2RHet 887780 887870 -2400891 + TV1I LTR Gypsy 798 887 -5076 2 591 10723 32 16 0 chr2RHet 888083 889342 -2399419 - DOC3_DM LINE Jockey 0 4740 3462 2 591 5184 41 26 26 chr2RHet 889676 890376 -2398385 + I_DM LINE I 431 1130 -5101 2 591 2194 66 14 32 chr2RHet 890375 890720 -2398041 + I_DM LINE I 1447 1785 -4446 2 591 2997 34 3 0 chr2RHet 890730 891079 -2397682 + DMRT1A LINE R1 1 350 -4833 2 591 225 321 74 45 chr2RHet 893074 893276 -2395485 + ROVER-I_DM LTR Gypsy 3068 3275 -3309 2 591 1634 60 4 36 chr2RHet 895521 895746 -2393015 + DMRT1A LINE R1 334 551 -4632 2 591 23233 13 8 1 chr2RHet 895722 899755 -2389006 + DMRT1A LINE R1 1078 5183 0 2 591 15431 63 28 2 chr2RHet 899753 901823 -2386938 + I_DM LINE I 1772 3895 -2336 2 591 35370 1 0 0 chr2RHet 901825 905661 -2383100 - FW_DM LINE Jockey 0 4692 857 2 591 4737 0 0 0 chr2RHet 905661 906167 -2382594 + TABOR_LTR LTR Gypsy 1 506 0 2 591 56827 2 0 1 chr2RHet 906167 912510 -2376251 + TABOR_I LTR Gypsy 1 6336 0 2 591 4737 0 0 0 chr2RHet 912508 913014 -2375747 + TABOR_LTR LTR Gypsy 1 506 0 2 591 7933 2 0 0 chr2RHet 913014 913874 -2374887 - FW_DM LINE Jockey -3832 860 1 2 591 10642 64 56 3 chr2RHet 913879 915374 -2373387 + I_DM LINE I 3886 5459 -772 2 591 198 0 0 0 chr2RHet 915374 915396 -2373365 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 2 591 996 281 47 25 chr2RHet 915404 915809 -2372952 + IDEFIX_I LTR Gypsy 1416 1829 -3799 2 73 4561 259 52 30 chr2RHet 915797 917569 -2371192 + TV1I LTR Gypsy 2671 4481 -1482 2 592 2280 284 73 14 chr2RHet 917682 918908 -2369853 + QUASIMODO_I LTR Gypsy 4763 6060 0 2 592 1697 305 86 38 chr2RHet 919877 921125 -2367636 + Invader6_I LTR Gypsy 907 2210 -1889 2 592 1282 103 0 111 chr2RHet 921403 921655 -2367106 + DIVER_LTR LTR Pao 1 224 0 2 592 45739 28 18 0 chr2RHet 921676 926912 -2361849 + DIVER_I LTR Pao 1 5329 -314 2 592 522 308 35 22 chr2RHet 926946 927172 -2361589 + Invader6_I LTR Gypsy 3310 3538 -561 2 592 856 90 0 16 chr2RHet 927772 927896 -2360865 - Gypsy6A_LTR LTR Gypsy -169 251 130 2 592 3936 289 75 46 chr2RHet 927902 930793 -2357968 - Gypsy6_I LTR Gypsy -195 6817 3834 2 592 490 183 0 0 chr2RHet 930799 930892 -2357869 - GTWIN_I LTR Gypsy -3100 3321 3229 2 592 3542 264 103 60 chr2RHet 930885 932132 -2356629 - Gypsy6_I LTR Gypsy -3576 3436 2136 2 592 661 233 121 11 chr2RHet 932423 932597 -2356164 - Gypsy6_I LTR Gypsy -5530 1482 1290 2 592 34 79 0 0 chr2RHet 932653 932729 -2356032 + AT_rich Low_complexity Low_complexity 1 76 0 2 592 715 32 0 104 chr2RHet 932957 933063 -2355698 - Gypsy6A_LTR LTR Gypsy 0 420 326 2 592 1232 60 0 0 chr2RHet 933064 933214 -2355547 - Gypsy6A_LTR LTR Gypsy -270 150 1 2 592 1934 181 33 0 chr2RHet 933575 933935 -2354826 + MAX_I LTR Pao 2457 2828 -5086 2 592 812 156 65 138 chr2RHet 933935 934166 -2354595 + ACCORD2_LTR LTR Gypsy 1 214 -1 2 592 1193 121 13 73 chr2RHet 934167 934396 -2354365 + ACCORD2_I LTR Gypsy 1 215 -6997 2 592 1083 215 38 57 chr2RHet 934396 934766 -2353995 + Gypsy_LTR LTR Gypsy 1 363 -119 2 592 4002 142 9 4 chr2RHet 934777 935518 -2353243 + BS4_DM LINE Jockey 89 573 -181 2 592 7399 162 31 1 chr2RHet 935517 936727 -2352034 - Gypsy_I LTR Gypsy -3249 3258 2012 2 592 1137 141 0 6 chr2RHet 936739 936916 -2351845 + ACCORD2_I LTR Gypsy 500 675 -6537 2 592 1331 93 118 0 chr2RHet 936916 937116 -2351645 + Gypsy11_LTR LTR Gypsy 1 264 -188 2 592 12500 84 9 2 chr2RHet 937116 938839 -2349922 + S_DM DNA Tc1 1 1736 0 2 592 1062 103 6 13 chr2RHet 938839 938996 -2349765 + Gypsy11_LTR LTR Gypsy 275 430 -22 2 592 434 53 0 17 chr2RHet 939000 939058 -2349703 + ACCORD2_I LTR Gypsy 1224 1280 -5932 2 592 3311 30 0 57 chr2RHet 939059 939481 -2349280 - Gypsy3_LTR LTR Gypsy 0 398 1 2 592 17679 148 29 37 chr2RHet 939481 944432 -2344329 - Gypsy3_I LTR Gypsy 0 6177 1991 2 592 6121 25 61 8 chr2RHet 944437 945258 -2343503 + PROTOP_A DNA P 1 864 -241 2 592 226 0 0 0 chr2RHet 945256 945285 -2343476 + PROTOP_A DNA P 1076 1104 -1 2 592 13426 30 12 29 chr2RHet 945285 947041 -2341720 - Gypsy3_I LTR Gypsy -4450 1727 1 2 592 3021 35 0 57 chr2RHet 947041 947463 -2341298 - Gypsy3_LTR LTR Gypsy 0 398 1 2 592 246 119 0 0 chr2RHet 947463 947505 -2341256 + ACCORD2_I LTR Gypsy 1326 1367 -5845 2 592 17982 105 69 17 chr2RHet 947584 950807 -2337954 + ACCORD2_I LTR Gypsy 1522 4637 -2575 2 592 6632 72 69 8 chr2RHet 950800 951816 -2336945 + ACCORD2_I LTR Gypsy 5159 6236 -976 2 592 2458 83 103 7 chr2RHet 951846 952792 -2335969 + ACCORD2_I LTR Gypsy 3851 4950 -2262 2 592 12355 81 59 9 chr2RHet 952786 954739 -2334022 + ACCORD2_I LTR Gypsy 5159 7209 -3 2 592 556 102 27 123 chr2RHet 954746 954892 -2333869 + ACCORD2_LTR LTR Gypsy 1 132 -83 2 592 2237 46 3 29 chr2RHet 954895 955209 -2333552 + NINJA_LTR LTR Pao 1 306 -11 2 592 475 107 0 13 chr2RHet 955215 955291 -2333470 + ACCORD2_LTR LTR Gypsy 141 215 0 2 592 1965 204 88 32 chr2RHet 955291 955788 -2332973 + MAX_I LTR Pao 2825 3349 -4565 2 592 1263 148 68 4 chr2RHet 955795 956032 -2332729 + MAX_I LTR Pao 4712 4963 -2951 2 592 1849 199 49 10 chr2RHet 956028 956439 -2332322 + MAX_I LTR Pao 5209 5635 -2279 2 592 597 173 269 0 chr2RHet 957090 957250 -2331511 - Gypsy_I LTR Gypsy -399 6108 5906 2 592 278 136 0 0 chr2RHet 957252 957296 -2331465 - GTWIN_I LTR Gypsy -745 5676 5633 2 592 885 194 134 0 chr2RHet 957311 957527 -2331234 - Gypsy_I LTR Gypsy -883 5624 5380 2 592 998 193 147 64 chr2RHet 957634 958071 -2330690 - DNAREP1_DM LINE Penelope -3 591 119 2 592 1127 126 175 0 chr2RHet 958081 958556 -2330205 + DMCR1A LINE CR1 187 774 -3696 2 592 535 158 150 0 chr2RHet 958579 958699 -2330062 + DMCR1A LINE CR1 1491 1628 -2842 2 592 498 236 116 49 chr2RHet 958699 958966 -2329795 + Gypsy3_LTR LTR Gypsy 1 285 -113 2 592 6021 34 61 7 chr2RHet 959049 960235 -2328526 - DOC3_DM LINE Jockey -1098 3642 2393 2 592 7711 48 21 0 chr2RHet 960433 961498 -2327263 + I_DM LINE I 100 1186 -5045 2 592 575 158 350 46 chr2RHet 961494 961734 -2327027 + ROVER-LTR_DM LTR Gypsy 55 367 0 2 592 363 33 180 0 chr2RHet 962006 962067 -2326694 + I_DM LINE I 5396 5467 -764 2 592 704 104 244 23 chr2RHet 962075 962282 -2326479 - PROTOP_B DNA P -484 669 417 2 592 1884 48 196 0 chr2RHet 962287 962783 -2325978 - DOC3_DM LINE Jockey 0 4740 4148 2 592 5731 29 4 0 chr2RHet 962775 963477 -2325284 - DOC3_DM LINE Jockey -738 4002 3298 2 592 1518 35 211 4 chr2RHet 963471 963699 -2325062 - DOC3_DM LINE Jockey -1799 2941 2667 2 592 6879 42 19 1 chr2RHet 963701 964586 -2324175 - DOC3_DM LINE Jockey -2193 2547 1647 2 592 1998 24 4 0 chr2RHet 964591 964840 -2323921 - DOC3_DM LINE Jockey -3475 1265 1016 2 592 5999 57 1 4 chr2RHet 964837 965647 -2323114 - DOC3_DM LINE Jockey -3889 851 44 2 592 236 239 62 27 chr2RHet 965704 965816 -2322945 + TV1I LTR Gypsy 1170 1285 -4678 2 592 7324 50 45 0 chr2RHet 966184 967224 -2321537 + I_DM LINE I 100 1186 -5045 2 592 575 158 350 46 chr2RHet 967220 967460 -2321301 + ROVER-LTR_DM LTR Gypsy 55 367 0 2 592 363 33 180 0 chr2RHet 967732 967793 -2320968 + I_DM LINE I 5396 5467 -764 2 592 704 104 244 23 chr2RHet 967801 968008 -2320753 - PROTOP_B DNA P -484 669 417 2 592 3247 48 196 0 chr2RHet 968013 968509 -2320252 - DOC3_DM LINE Jockey 0 4740 4148 2 592 5755 27 4 0 chr2RHet 968501 969203 -2319558 - DOC3_DM LINE Jockey -738 4002 3298 2 592 1958 35 66 4 chr2RHet 969197 969456 -2319305 - DOC3_DM LINE Jockey -1799 2941 2667 2 592 6106 62 14 4 chr2RHet 969458 970316 -2318445 - DOC3_DM LINE Jockey -2324 2416 933 2 592 1942 36 4 0 chr2RHet 970321 970570 -2318191 - DOC3_DM LINE Jockey -3475 1265 1016 2 592 6326 52 1 4 chr2RHet 970567 971410 -2317351 - DOC3_DM LINE Jockey -3889 851 11 2 592 253 237 66 25 chr2RHet 971451 971572 -2317189 + TV1I LTR Gypsy 1160 1285 -4678 2 592 265 255 42 42 chr2RHet 971563 971716 -2317045 + TV1I LTR Gypsy 1528 1724 -4336 2 592 7781 45 21 0 chr2RHet 971963 973028 -2315733 + I_DM LINE I 100 1186 -5045 2 592 575 158 350 46 chr2RHet 973024 973264 -2315497 + ROVER-LTR_DM LTR Gypsy 55 367 0 2 592 363 33 180 0 chr2RHet 973536 973597 -2315164 + I_DM LINE I 5396 5467 -764 2 592 704 99 244 23 chr2RHet 973605 973812 -2314949 - PROTOP_B DNA P -484 669 417 2 592 3261 44 196 0 chr2RHet 973816 974312 -2314449 - DOC3_DM LINE Jockey 0 4740 4148 2 592 5755 27 4 0 chr2RHet 974304 975006 -2313755 - DOC3_DM LINE Jockey -738 4002 3298 2 592 1958 35 66 4 chr2RHet 975000 975259 -2313502 - DOC3_DM LINE Jockey -1799 2941 2667 2 592 6106 62 14 4 chr2RHet 975261 976119 -2312642 - DOC3_DM LINE Jockey -2324 2416 933 2 592 1942 36 4 0 chr2RHet 976124 976373 -2312388 - DOC3_DM LINE Jockey -3475 1265 1016 2 592 6342 51 1 4 chr2RHet 976370 977213 -2311548 - DOC3_DM LINE Jockey -3889 851 11 2 592 253 237 66 25 chr2RHet 977254 977375 -2311386 + TV1I LTR Gypsy 1160 1285 -4678 2 592 265 255 42 42 chr2RHet 977366 977519 -2311242 + TV1I LTR Gypsy 1528 1724 -4336 2 592 7744 44 24 0 chr2RHet 977766 978828 -2309933 + I_DM LINE I 100 1186 -5045 2 592 575 158 350 46 chr2RHet 978824 979064 -2309697 + ROVER-LTR_DM LTR Gypsy 55 367 0 2 592 363 33 180 0 chr2RHet 979336 979397 -2309364 + I_DM LINE I 5396 5467 -764 2 592 704 104 244 23 chr2RHet 979405 979612 -2309149 - PROTOP_B DNA P -484 669 417 2 592 1884 48 196 0 chr2RHet 979617 980113 -2308648 - DOC3_DM LINE Jockey 0 4740 4148 2 592 5731 29 4 0 chr2RHet 980105 980807 -2307954 - DOC3_DM LINE Jockey -738 4002 3298 2 592 1128 42 206 4 chr2RHet 980801 981029 -2307732 - DOC3_DM LINE Jockey -1799 2941 2667 2 592 6845 41 20 1 chr2RHet 981031 981915 -2306846 - DOC3_DM LINE Jockey -2193 2547 1647 2 592 2952 21 185 2 chr2RHet 981920 982433 -2306328 - DOC3_DM LINE Jockey -3475 1265 659 2 592 1491 188 6 3 chr2RHet 982437 982806 -2305955 + Gypsy3_I LTR Gypsy 3752 4123 -2054 2 592 3247 120 45 0 chr2RHet 982811 983327 -2305434 + Gypsy3_I LTR Gypsy 3956 4494 -1683 2 592 22 56 0 0 chr2RHet 983364 983400 -2305361 + AT_rich Low_complexity Low_complexity 1 36 0 2 592 360 360 44 12 chr2RHet 983416 983824 -2304937 + DIVER2_I LTR Pao 1969 2389 -1758 2 592 310 364 23 20 chr2RHet 984166 984516 -2304245 + DIVER2_I LTR Pao 2895 3245 -902 2 592 236 228 50 12 chr2RHet 984530 984610 -2304151 + TRAM_I LTR Pao 2622 2704 -4 2 592 1756 88 0 0 chr2RHet 984837 985098 -2303663 - PROTOP_B DNA P -759 394 135 2 592 1354 82 178 16 chr2RHet 985106 985353 -2303408 + DMCR1A LINE CR1 2307 2593 -1877 2 592 1180 151 47 0 chr2RHet 985380 985592 -2303169 + DMCR1A LINE CR1 3335 3556 -914 2 592 257 146 0 0 chr2RHet 985588 985636 -2303125 + DMCR1A LINE CR1 3755 3802 -668 2 592 1375 90 84 13 chr2RHet 985654 985891 -2302870 + DMCR1A LINE CR1 3922 4175 -295 2 592 3534 112 35 52 chr2RHet 986063 986740 -2302021 - LOOPER1_DM DNA PiggyBac -1110 771 106 2 592 210 116 0 44 chr2RHet 989299 989344 -2299417 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 2 592 3036 103 74 53 chr2RHet 989677 990259 -2298502 - DNAREP1_DM LINE Penelope 0 594 1 2 592 22 0 0 0 chr2RHet 990350 990372 -2298389 + AT_rich Low_complexity Low_complexity 1 22 0 2 592 330 241 0 0 chr2RHet 990481 990560 -2298201 + DIVER2_I LTR Pao 4035 4113 -34 2 592 1444 79 65 0 chr2RHet 990645 990859 -2297902 + DNAREP1_DM LINE Penelope 364 591 -3 2 592 920 151 32 0 chr2RHet 990856 991041 -2297720 - I_DM LINE I -3914 2317 2127 2 592 1051 184 13 4 chr2RHet 991060 991289 -2297472 - Stalker2_I LTR Gypsy -3179 4223 3993 2 592 30 69 0 0 chr2RHet 991425 991483 -2297278 + AT_rich Low_complexity Low_complexity 1 58 0 2 592 541 165 161 23 chr2RHet 991532 991662 -2297099 + PROTOP_B DNA P 940 1087 -66 2 592 35 24 0 0 chr2RHet 992119 992161 -2296600 + AT_rich Low_complexity Low_complexity 1 42 0 2 592 22 56 0 0 chr2RHet 992825 992861 -2295900 + AT_rich Low_complexity Low_complexity 1 36 0 2 592 339 328 24 25 chr2RHet 993213 993604 -2295157 + Gypsy3_I LTR Gypsy 1218 1784 -5228 2 592 924 336 45 39 chr2RHet 994939 995361 -2293400 + Gypsy4_I LTR Gypsy 2289 2780 -3641 2 592 1513 23 19 0 chr2RHet 995361 995575 -2293186 + TLD2 Unknown Unknown 1 218 0 2 592 924 336 45 39 chr2RHet 995575 996222 -2292539 + Gypsy4_I LTR Gypsy 2781 3538 -2883 2 592 25 0 0 0 chr2RHet 997505 997530 -2291231 + AT_rich Low_complexity Low_complexity 1 25 0 2 592 21 57 0 0 chr2RHet 998757 998792 -2289969 + AT_rich Low_complexity Low_complexity 1 35 0 2 592 36 23 0 0 chr2RHet 999417 999460 -2289301 + AT_rich Low_complexity Low_complexity 1 43 0 2 592 367 202 12 0 chr2RHet 999916 1000000 -2288761 + Gypsy12A_LTR LTR Gypsy 2 86 -2194 2 592 659 12 146 0 chr2RHet 1000010 1000092 -2288669 + PROTOP_B DNA P 1 94 -1059 2 592 6410 44 23 11 chr2RHet 1000088 1000970 -2287791 + PROTOP_B DNA P 224 1115 -38 2 592 3396 199 59 103 chr2RHet 1000970 1002619 -2286142 + Gypsy12A_LTR LTR Gypsy 148 1648 -632 2 592 8387 25 33 48 chr2RHet 1002637 1003759 -2285002 - PROTOP_A DNA P 0 1105 1 2 592 2569 127 83 53 chr2RHet 1003845 1004377 -2284384 + Gypsy12A_LTR LTR Gypsy 1789 2336 0 2 592 24 0 0 0 chr2RHet 1004536 1004560 -2284201 + AT_rich Low_complexity Low_complexity 1 24 0 2 592 30 27 0 0 chr2RHet 1005237 1005274 -2283487 + AT_rich Low_complexity Low_complexity 1 37 0 2 592 26 0 0 0 chr2RHet 1005741 1005767 -2282994 + AT_rich Low_complexity Low_complexity 1 26 0 2 592 25 0 0 0 chr2RHet 1005810 1005835 -2282926 + AT_rich Low_complexity Low_complexity 1 25 0 2 592 2611 107 136 115 chr2RHet 1006173 1006755 -2282006 + DNAREP1_DM LINE Penelope 1 594 0 2 592 359 184 0 0 chr2RHet 1006997 1007084 -2281677 - MINOS DNA Tc1 -153 1622 1536 2 592 22 35 0 0 chr2RHet 1007221 1007250 -2281511 + AT_rich Low_complexity Low_complexity 1 29 0 2 592 467 60 0 43 chr2RHet 1007309 1007379 -2281382 + DOC3_DM LINE Jockey 3576 3642 -1098 2 592 234 158 0 73 chr2RHet 1007391 1007432 -2281329 - Gypsy3_LTR LTR Gypsy -6 392 355 2 592 598 229 126 48 chr2RHet 1007459 1007729 -2281032 - Gypsy3_LTR LTR Gypsy -107 291 1 2 592 575 158 150 0 chr2RHet 1007729 1007849 -2280912 - DMCR1A LINE CR1 -2842 1628 1491 2 592 2276 122 238 0 chr2RHet 1007872 1008347 -2280414 - DMCR1A LINE CR1 -3696 774 187 2 592 1210 192 129 57 chr2RHet 1008357 1008798 -2279963 + DNAREP1_DM LINE Penelope 119 591 -3 2 592 647 211 0 0 chr2RHet 1008904 1009027 -2279734 + Gypsy_I LTR Gypsy 5380 5502 -1005 2 592 1795 87 0 108 chr2RHet 1009027 1009361 -2279400 + Invader3_LTR LTR Gypsy 1 298 0 2 592 13753 26 19 0 chr2RHet 1009361 1010963 -2277798 + Invader3_I LTR Gypsy 1 1632 -3256 2 592 4573 38 5 0 chr2RHet 1010958 1011518 -2277243 + Invader3_I LTR Gypsy 2276 2838 -2050 2 592 22049 8 0 5 chr2RHet 1011544 1014541 -2274220 + DOC LINE Jockey 32 3093 -1632 2 592 3305 197 61 98 chr2RHet 1038592 1040241 -2248520 - Gypsy12A_LTR LTR Gypsy -632 1648 148 2 592 4437 87 73 31 chr2RHet 1040241 1041232 -2247529 - PROTOP_B DNA P -38 1115 1 2 592 1585 155 70 25 chr2RHet 1041279 1041637 -2247124 - IDEFIX_LTR LTR Gypsy 0 594 221 2 592 10948 150 59 5 chr2RHet 1041645 1043623 -2245138 - IDEFIX_I LTR Gypsy -1103 4525 2442 2 592 3989 164 151 35 chr2RHet 1043657 1044793 -2243968 - IDEFIX_I LTR Gypsy -4127 1501 234 2 592 351 194 0 0 chr2RHet 1044807 1044874 -2243887 - IDEFIX_I LTR Gypsy -5561 67 1 2 592 21 0 0 0 chr2RHet 1045069 1045090 -2243671 + AT_rich Low_complexity Low_complexity 1 21 0 2 593 1200 339 50 39 chr2RHet 1070315 1070759 -2218002 + Gypsy4_I LTR Gypsy 2320 2852 -3569 2 593 1577 23 19 0 chr2RHet 1070759 1070973 -2217788 + TLD2 Unknown Unknown 1 218 0 2 593 1200 339 50 39 chr2RHet 1070973 1071601 -2217160 + Gypsy4_I LTR Gypsy 2853 3609 -2812 2 593 275 279 49 49 chr2RHet 1072114 1072276 -2216485 + Gypsy4_I LTR Gypsy 4123 4284 -2137 2 593 245 175 73 73 chr2RHet 1072454 1072522 -2216239 + Gypsy4_I LTR Gypsy 4324 4391 -1897 2 593 23 0 0 0 chr2RHet 1072888 1072911 -2215850 + AT_rich Low_complexity Low_complexity 1 23 0 2 593 48 0 0 0 chr2RHet 1074903 1074951 -2213810 + AT_rich Low_complexity Low_complexity 1 48 0 2 593 1580 32 0 0 chr2RHet 1074967 1075153 -2213608 - PROTOP_B DNA P -967 186 1 2 593 15029 17 5 0 chr2RHet 1075153 1076900 -2211861 + Invader3_I LTR Gypsy 3133 4888 0 2 593 833 56 0 154 chr2RHet 1076900 1077069 -2211692 + Invader3_LTR LTR Gypsy 1 143 -155 2 593 431 125 0 83 chr2RHet 1077682 1077802 -2210959 + Invader3_LTR LTR Gypsy 140 298 0 2 593 378 167 0 0 chr2RHet 1077833 1077899 -2210862 + Gypsy_I LTR Gypsy 5559 5624 -883 2 593 227 147 0 0 chr2RHet 1077912 1077946 -2210815 + Gypsy_I LTR Gypsy 5729 5762 -745 2 593 645 169 371 0 chr2RHet 1077948 1078126 -2210635 + Gypsy_I LTR Gypsy 5906 6149 -358 2 593 3359 53 2 29 chr2RHet 1078777 1079225 -2209536 - G5_DM LINE Jockey 0 4856 4421 2 593 1039 122 44 93 chr2RHet 1079332 1079558 -2209203 - ACCORD2_LTR LTR Gypsy 0 215 1 2 593 1955 105 88 18 chr2RHet 1079558 1079887 -2208874 - ACCORD2_I LTR Gypsy 0 7212 6861 2 593 2516 64 77 5 chr2RHet 1079887 1080262 -2208499 - ACCORD2_I LTR Gypsy -496 6716 6315 2 593 26 0 0 0 chr2RHet 1080675 1080701 -2208060 + AT_rich Low_complexity Low_complexity 1 26 0 2 593 2952 50 26 0 chr2RHet 1081015 1081397 -2207364 - PROTOP_B DNA P -10 1143 752 2 593 238 192 34 119 chr2RHet 1081397 1081515 -2207246 + BLOOD_LTR LTR Gypsy 1 108 -291 2 593 260 200 14 28 chr2RHet 1081527 1081599 -2207162 + DM412 LTR Gypsy 71 141 -6756 2 593 4426 72 87 9 chr2RHet 1081655 1082311 -2206450 - PROTOP_B DNA P -446 707 1 2 593 12576 5 3 1 chr2RHet 1082559 1083992 -2204769 + M4DM DNA Transib 1 1435 0 2 593 260 262 29 19 chr2RHet 1084546 1084651 -2204110 - Gypsy3_LTR LTR Gypsy -17 381 276 2 593 253 122 0 0 chr2RHet 1084781 1084822 -2203939 - Gypsy3_LTR LTR Gypsy -357 41 1 2 593 593 283 0 0 chr2RHet 1084823 1085003 -2203758 - Invader1_I LTR Gypsy -675 2511 2332 2 593 302 318 118 15 chr2RHet 1085124 1085319 -2203442 - MICROPIA_I LTR Gypsy -1726 2750 2536 2 593 1052 338 61 7 chr2RHet 1085397 1086007 -2202754 - Invader6_I LTR Gypsy -2017 2082 1440 2 593 226 237 41 73 chr2RHet 1086372 1086495 -2202266 - Invader6_I LTR Gypsy -3093 1006 888 2 593 266 333 25 19 chr2RHet 1086517 1086679 -2202082 - Invader4_I LTR Gypsy -2250 163 1 2 593 759 142 0 0 chr2RHet 1087030 1087150 -2201611 - ACCORD2_I LTR Gypsy -6128 1084 965 2 593 1332 159 46 36 chr2RHet 1087160 1087441 -2201320 - ACCORD2_I LTR Gypsy -6517 695 412 2 593 308 303 139 19 chr2RHet 1088399 1088557 -2200204 + DIVER2_I LTR Pao 2913 3089 -1058 2 593 358 219 189 82 chr2RHet 1088675 1088919 -2199842 - Gypsy8_LTR LTR Gypsy -34 270 1 2 593 420 250 43 0 chr2RHet 1088924 1089040 -2199721 + DIVER2_I LTR Pao 3323 3443 -704 2 593 415 250 42 33 chr2RHet 1089117 1089237 -2199524 + DIVER2_I LTR Pao 3875 3995 -152 2 593 973 300 150 17 chr2RHet 1089540 1090068 -2198693 + NOMAD_I LTR Gypsy 2804 3330 -4192 2 593 1109 154 159 58 chr2RHet 1090093 1090438 -2198323 - DNAREP1_DM LINE Penelope -4 590 211 2 593 632 330 70 12 chr2RHet 1090452 1090783 -2197978 + NOMAD_I LTR Gypsy 3732 4081 -2491 2 593 1522 116 108 4 chr2RHet 1091370 1091630 -2197131 - MAX_LTR LTR Pao -34 287 1 2 593 11941 36 9 22 chr2RHet 1091633 1093150 -2195611 - MAX_I LTR Pao -1 7913 6418 2 593 20702 57 17 95 chr2RHet 1093148 1096404 -2192357 - MAX_I LTR Pao -4354 3560 557 2 593 5793 3 8 0 chr2RHet 1096470 1097123 -2191638 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 593 52192 5 3 0 chr2RHet 1097123 1102831 -2185930 - QUASIMODO_I LTR Gypsy 0 6060 352 2 593 195 0 86 0 chr2RHet 1102831 1102866 -2185895 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 2 593 52192 5 3 0 chr2RHet 1102866 1103200 -2185561 - QUASIMODO_I LTR Gypsy -5709 351 2 2 593 5793 3 8 0 chr2RHet 1103200 1103853 -2184908 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 593 52313 5 3 0 chr2RHet 1103853 1109562 -2179199 - QUASIMODO_I LTR Gypsy 0 6060 352 2 593 195 0 86 0 chr2RHet 1109562 1109597 -2179164 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 2 593 52313 5 3 0 chr2RHet 1109597 1109931 -2178830 - QUASIMODO_I LTR Gypsy -5709 351 2 2 593 5771 5 8 0 chr2RHet 1109931 1110584 -2178177 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 593 2859 86 130 64 chr2RHet 1110778 1111310 -2177451 - MAX_I LTR Pao -7347 567 1 2 593 1091 99 82 6 chr2RHet 1111363 1111545 -2177216 - MAX_LTR LTR Pao -74 247 52 2 593 256 100 0 0 chr2RHet 1111694 1111734 -2177027 - BARI1 DNA Tc1 -1708 42 3 2 593 2456 142 50 92 chr2RHet 1111702 1112322 -2176439 + IDEFIX_LTR LTR Gypsy 1 594 0 2 593 304 215 0 0 chr2RHet 1112800 1112865 -2175896 + IDEFIX_I LTR Gypsy 3 67 -5561 2 593 1552 185 213 1 chr2RHet 1112879 1113585 -2175176 + IDEFIX_I LTR Gypsy 234 1089 -4539 2 593 14990 2 0 0 chr2RHet 1113577 1115290 -2173471 + BS2 LINE Jockey 3009 4721 0 2 593 252 0 0 0 chr2RHet 1115299 1115327 -2173434 + (A)n Simple_repeat Simple_repeat 1 28 0 2 593 442 84 42 0 chr2RHet 1115327 1115398 -2173363 + IDEFIX_I LTR Gypsy 1428 1501 -4127 2 593 17202 64 39 4 chr2RHet 1115432 1117939 -2170822 + IDEFIX_I LTR Gypsy 2442 5036 -592 2 593 2735 58 0 0 chr2RHet 1117939 1118300 -2170461 + BEL_LTR LTR Pao 1 361 0 2 593 45858 16 1 1 chr2RHet 1118300 1123699 -2165062 + BEL_I LTR Pao 1 5404 0 2 593 2735 58 0 0 chr2RHet 1123699 1124060 -2164701 + BEL_LTR LTR Pao 1 361 0 2 593 33124 16 2 1 chr2RHet 1124060 1127971 -2160790 + BEL_I LTR Pao 1 3916 -1488 2 593 8764 16 0 0 chr2RHet 1127969 1128999 -2159762 + BEL_I LTR Pao 4375 5404 0 2 593 2725 53 0 3 chr2RHet 1129002 1129362 -2159399 + BEL_LTR LTR Pao 3 361 0 2 593 982 22 7 7 chr2RHet 1129396 1129534 -2159227 + IDEFIX_LTR LTR Gypsy 457 594 0 2 593 1452 124 129 59 chr2RHet 1129548 1129935 -2158826 + DM297_LTR LTR Gypsy 1 414 0 2 593 420 170 69 10 chr2RHet 1129959 1130060 -2158701 + Gypsy2_LTR LTR Gypsy 100 206 -147 2 593 594 158 9 144 chr2RHet 1130207 1130422 -2158339 + Gypsy2_I LTR Gypsy 493 678 -5457 2 593 2451 152 32 11 chr2RHet 1130891 1131562 -2157199 + Gypsy2_I LTR Gypsy 712 1452 -4683 2 593 1516 230 81 30 chr2RHet 1131572 1132296 -2156465 + Gypsy2_I LTR Gypsy 1511 2335 -4677 2 593 322 91 0 0 chr2RHet 1132301 1132345 -2156416 + Gypsy2_I LTR Gypsy 1431 1474 -4661 2 593 21 0 0 0 chr2RHet 1132455 1132476 -2156285 + AT_rich Low_complexity Low_complexity 1 21 0 2 593 331 194 0 0 chr2RHet 1132671 1132738 -2156023 + IDEFIX_I LTR Gypsy 1 67 -5561 2 593 1305 175 133 0 chr2RHet 1132752 1133067 -2155694 + IDEFIX_I LTR Gypsy 234 590 -5038 2 593 261 157 20 0 chr2RHet 1133153 1133204 -2155557 + Gypsy6_LTR LTR Gypsy 245 296 -111 2 593 1703 292 28 23 chr2RHet 1133807 1134546 -2154215 + Gypsy_DS LTR Gypsy 641 1944 -5578 2 593 295 222 24 24 chr2RHet 1134891 1134974 -2153787 + Gypsy_I LTR Gypsy 1918 2000 -4507 2 593 2796 271 88 5 chr2RHet 1135142 1136085 -2152676 + Gypsy_I LTR Gypsy 2614 3634 -2873 2 593 249 226 0 0 chr2RHet 1136083 1136136 -2152625 + Gypsy9_I LTR Gypsy 2759 2811 -1866 2 593 356 315 18 18 chr2RHet 1136136 1136301 -2152460 + Gypsy_I LTR Gypsy 3794 3958 -2549 2 593 2968 300 29 35 chr2RHet 1136326 1137654 -2151107 + GTWIN_I LTR Gypsy 3995 5313 -1108 2 593 1201 328 48 30 chr2RHet 1137662 1138495 -2150266 + Gypsy_I LTR Gypsy 5660 6507 0 2 593 289 259 86 8 chr2RHet 1138547 1138664 -2150097 + MDG1_LTR LTR Gypsy 154 279 -163 2 593 447 150 88 22 chr2RHet 1138711 1138847 -2149914 + Gypsy6_LTR LTR Gypsy 155 299 -108 2 593 15285 105 11 22 chr2RHet 1139045 1141497 -2147264 + IDEFIX_I LTR Gypsy 1046 3470 -2158 2 593 3505 80 48 0 chr2RHet 1141505 1142043 -2146718 + IDEFIX_I LTR Gypsy 3822 4385 -1243 2 593 8317 70 11 2 chr2RHet 1142585 1143814 -2144947 + IDEFIX_I LTR Gypsy 4389 5628 0 2 593 1703 43 4 17 chr2RHet 1143814 1144050 -2144711 + IDEFIX_LTR LTR Gypsy 1 233 -361 2 593 24325 5 9 0 chr2RHet 1144050 1146957 -2141804 + DM176_I LTR Gypsy 746 3679 -2741 2 593 14430 4 6 0 chr2RHet 1146955 1148701 -2140060 + DM176_I LTR Gypsy 4297 6052 -368 2 593 1436 0 0 0 chr2RHet 1148693 1148863 -2139898 + DM176_I LTR Gypsy 6251 6420 0 2 593 2849 47 57 74 chr2RHet 1148863 1149365 -2139396 + DM176_LTR LTR Gypsy 1 480 -27 2 593 29905 7 8 11 chr2RHet 1149365 1153055 -2135706 + DM176_I LTR Gypsy 1 3679 -2741 2 593 17609 4 0 0 chr2RHet 1153053 1155177 -2133584 + DM176_I LTR Gypsy 4297 6420 0 2 593 2826 49 57 74 chr2RHet 1155177 1155679 -2133082 + DM176_LTR LTR Gypsy 1 480 -27 2 593 557 74 0 0 chr2RHet 1155679 1155760 -2133001 + DM176_I LTR Gypsy 1 81 -6339 2 593 2005 4 0 15 chr2RHet 1155743 1156002 -2132759 - DOC LINE Jockey -5 4720 4466 2 593 10542 9 42 0 chr2RHet 1155999 1157795 -2130966 - DOC LINE Jockey -933 3792 1921 2 593 8334 12 4 8 chr2RHet 1157794 1158274 -2130487 + DM176_I LTR Gypsy 53 527 -5893 2 593 181 30 29 57 chr2RHet 1158274 1158309 -2130452 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2 593 8334 12 4 8 chr2RHet 1158309 1158887 -2129874 + DM176_I LTR Gypsy 528 1105 -5315 2 594 5929 62 50 9 chr2RHet 1254887 1255690 -2033071 + M4DM DNA Transib 264 1099 -336 2 594 296 114 0 0 chr2RHet 1255695 1255739 -2033022 - DNAREP1_DM LINE Penelope -550 44 1 2 594 315 269 43 0 chr2RHet 1255945 1256038 -2032723 + DIVER2_I LTR Pao 4022 4118 -29 2 594 1476 81 67 0 chr2RHet 1256120 1256330 -2032431 + DNAREP1_DM LINE Penelope 364 587 -7 2 594 967 160 32 0 chr2RHet 1256329 1256516 -2032245 - I_DM LINE I -3912 2319 2127 2 594 232 149 43 0 chr2RHet 1256536 1256583 -2032178 - TABOR_I LTR Gypsy -2684 3652 3604 2 594 575 205 0 39 chr2RHet 1256574 1256701 -2032060 - STALKER4_I LTR Gypsy -2717 3813 3692 2 594 227 158 0 0 chr2RHet 1256845 1256902 -2031859 + PROTOP DNA P 4009 4065 -415 2 594 480 184 354 0 chr2RHet 1256960 1257118 -2031643 + PROTOP DNA P 4261 4479 -1 2 594 245 132 0 0 chr2RHet 1257118 1257156 -2031605 + PROTOP DNA P 4441 4479 -1 2 594 478 209 9 0 chr2RHet 1257518 1257612 -2031149 + Gypsy12A_LTR LTR Gypsy 2 96 -2184 2 594 618 24 146 0 chr2RHet 1257612 1257694 -2031067 + PROTOP_B DNA P 1 94 -1059 2 594 6693 44 51 5 chr2RHet 1257690 1258579 -2030182 + PROTOP_B DNA P 224 1153 0 2 594 331 263 0 0 chr2RHet 1259051 1259150 -2029611 + Copia2_I LTR Copia 574 672 -3490 2 594 32 57 0 0 chr2RHet 1259856 1259909 -2028852 + AT_rich Low_complexity Low_complexity 1 53 0 2 594 277 280 129 0 chr2RHet 1260270 1260363 -2028398 + FROGGER_I LTR Copia 174 278 -1799 2 594 1589 293 29 40 chr2RHet 1260517 1261136 -2027625 + FROGGER_I LTR Copia 604 1215 -862 2 594 1173 302 90 32 chr2RHet 1261239 1261886 -2026875 + FROGGER_I LTR Copia 1352 2035 -42 2 594 21 57 0 0 chr2RHet 1261944 1261979 -2026782 + AT_rich Low_complexity Low_complexity 1 35 0 2 594 8712 49 35 6 chr2RHet 1262366 1263500 -2025261 + M4DM DNA Transib 1 1167 -268 2 594 382 216 0 0 chr2RHet 1263506 1263594 -2025167 - IDEFIX_I LTR Gypsy -830 4798 4711 2 594 326 141 27 27 chr2RHet 1263659 1263732 -2025029 - FB4_DM DNA Tc1 -2826 1263 1191 2 594 342 251 79 50 chr2RHet 1263754 1264031 -2024730 - TV1I LTR Gypsy -1476 4487 4203 2 594 1633 85 91 3 chr2RHet 1264032 1264328 -2024433 - S_DM DNA Tc1 -1414 322 1 2 594 230 297 36 7 chr2RHet 1264393 1264532 -2024229 - IDEFIX_I LTR Gypsy -1878 3750 3608 2 594 24 53 0 0 chr2RHet 1265687 1265725 -2023036 + AT_rich Low_complexity Low_complexity 1 38 0 2 594 272 242 16 0 chr2RHet 1266215 1266277 -2022484 + DNAREP1_DM LINE Penelope 431 493 -101 2 594 2005 135 23 115 chr2RHet 1266332 1266768 -2021993 + HOBO DNA hAT 1 396 -2620 2 594 36 23 0 0 chr2RHet 1266821 1266864 -2021897 + AT_rich Low_complexity Low_complexity 1 43 0 2 594 2181 169 94 42 chr2RHet 1266867 1267416 -2021345 + HOBO DNA hAT 2422 2999 -17 2 594 8533 28 39 1 chr2RHet 1267416 1268483 -2020278 - PROTOP DNA P 0 4480 3373 2 594 4389 38 14 14 chr2RHet 1268472 1269029 -2019732 - PROTOP DNA P -3923 557 1 2 594 3871 5 0 0 chr2RHet 1269702 1270130 -2018631 + ROO_LTR LTR Pao 1 428 0 2 594 73038 1 3 0 chr2RHet 1270130 1278363 -2010398 + ROO_I LTR Pao 1 8256 0 2 594 3974 5 0 0 chr2RHet 1278363 1278791 -2009970 + ROO_LTR LTR Pao 1 428 0 2 594 232 284 0 0 chr2RHet 1279178 1279245 -2009516 - DIVER2_I LTR Pao -5 4142 4076 2 594 644 346 135 6 chr2RHet 1279265 1280080 -2008681 - DIVER2_I LTR Pao -158 3989 3070 2 594 22 0 0 0 chr2RHet 1280626 1280648 -2008113 + AT_rich Low_complexity Low_complexity 1 22 0 2 594 34687 15 7 7 chr2RHet 1280958 1284924 -2003837 + DOC2_DM LINE Jockey 522 4490 -303 2 594 695 0 0 40 chr2RHet 1284924 1285023 -2003738 + DOC2_DM LINE Jockey 4698 4792 -1 2 594 269 178 0 0 chr2RHet 1285117 1285162 -2003599 + BS2 LINE Jockey 4238 4282 -439 2 594 1550 219 105 20 chr2RHet 1285171 1285580 -2003181 + Invader3_I LTR Gypsy 363 806 -4082 2 594 1151 155 72 0 chr2RHet 1285579 1285772 -2002989 + Invader3_I LTR Gypsy 970 1176 -3712 2 594 1148 190 322 0 chr2RHet 1285759 1286128 -2002633 + Invader3_I LTR Gypsy 1628 2115 -2773 2 594 368 130 0 0 chr2RHet 1286119 1286173 -2002588 + Invader3_I LTR Gypsy 4835 4888 0 2 594 285 221 199 35 chr2RHet 1286173 1286314 -2002447 + Invader3_LTR LTR Gypsy 1 164 -134 2 594 409 153 12 12 chr2RHet 1287592 1287678 -2001083 + DNAREP1_DM LINE Penelope 188 273 -321 2 594 1801 212 116 16 chr2RHet 1287683 1288133 -2000628 + FW3_DM LINE Jockey 1631 2125 -1007 2 594 9006 41 22 4 chr2RHet 1288254 1289367 -1999394 + TRANSIB3 DNA Transib 3 1135 -1748 2 594 2831 47 51 0 chr2RHet 1289368 1290039 -1998722 + TRANSIB3 DNA Transib 2179 2883 0 2 594 311 130 0 0 chr2RHet 1290110 1290156 -1998605 + DMCR1A LINE CR1 2457 2502 -1968 2 594 180 129 48 38 chr2RHet 1290301 1290406 -1998355 + (TTATA)n Simple_repeat Simple_repeat 1 106 0 2 594 659 177 8 8 chr2RHet 1290575 1290700 -1998061 + DMCR1A LINE CR1 2489 2613 -1857 2 594 991 145 161 0 chr2RHet 1290728 1290914 -1997847 + DMCR1A LINE CR1 2846 3061 -1409 2 594 2312 144 174 2 chr2RHet 1291209 1291796 -1996965 + DMCR1A LINE CR1 3102 3789 -681 2 594 23 33 0 0 chr2RHet 1291844 1291874 -1996887 + AT_rich Low_complexity Low_complexity 1 30 0 2 594 1983 245 113 2 chr2RHet 1294013 1294888 -1993873 - BEL_I LTR Pao -148 5256 4285 2 594 697 274 42 8 chr2RHet 1294883 1295122 -1993639 - BEL_I LTR Pao -1254 4150 3904 2 594 535 214 0 0 chr2RHet 1295126 1295238 -1993523 - BEL_I LTR Pao -3690 1714 1603 2 594 738 192 76 38 chr2RHet 1295233 1295417 -1993344 - BEL_I LTR Pao -4314 1090 900 2 594 1054 221 13 8 chr2RHet 1295460 1295697 -1993064 - BEL_I LTR Pao -5060 344 107 2 594 26 0 0 0 chr2RHet 1296093 1296119 -1992642 + AT_rich Low_complexity Low_complexity 1 26 0 2 594 654 121 99 53 chr2RHet 1296750 1296881 -1991880 - DNAREP1_DM LINE Penelope -321 273 137 2 594 384 204 182 107 chr2RHet 1296853 1297078 -1991683 - DNAREP1_DM LINE Penelope -262 332 91 2 594 3157 35 0 29 chr2RHet 1297244 1297629 -1991132 - ROO_LTR LTR Pao 0 428 55 2 594 1141 325 52 4 chr2RHet 1299258 1299719 -1989042 + DIVER2_I LTR Pao 434 916 -3231 2 594 264 217 0 55 chr2RHet 1300441 1300514 -1988247 + Gypsy8_I LTR Gypsy 3785 3853 -494 2 594 561 233 8 176 chr2RHet 1300512 1300767 -1987994 + Gypsy8_I LTR Gypsy 3957 4168 -179 2 594 234 214 38 166 chr2RHet 1300817 1300974 -1987787 + Gypsy8_I LTR Gypsy 4147 4283 -64 2 594 239 233 38 192 chr2RHet 1300952 1301165 -1987596 + Gypsy8_I LTR Gypsy 4168 4347 0 2 594 587 231 0 123 chr2RHet 1301165 1301377 -1987384 + Gypsy8_LTR LTR Gypsy 119 304 0 2 594 248 221 26 13 chr2RHet 1301376 1301454 -1987307 + Gypsy8_I LTR Gypsy 1 79 -4268 2 594 849 207 39 58 chr2RHet 1301926 1302183 -1986578 - Gypsy2_LTR LTR Gypsy -64 289 38 2 594 4752 139 84 64 chr2RHet 1302200 1303124 -1985637 - Gypsy2_I LTR Gypsy -10 6125 5183 2 594 1813 164 148 3 chr2RHet 1303122 1303627 -1985134 - Gypsy2_I LTR Gypsy -1453 4682 4090 2 594 2140 108 32 24 chr2RHet 1303632 1303973 -1984788 - Gypsy2_I LTR Gypsy -2297 3838 3495 2 594 1055 222 34 0 chr2RHet 1303961 1304200 -1984561 - Gypsy2_I LTR Gypsy -3751 2384 2138 2 594 27 0 0 0 chr2RHet 1304220 1304247 -1984514 + AT_rich Low_complexity Low_complexity 1 27 0 2 594 238 303 0 0 chr2RHet 1304247 1304323 -1984438 + TOM_I LTR Gypsy 2380 2455 -3657 2 594 898 183 56 35 chr2RHet 1304328 1304560 -1984201 + DNAREP1_DM LINE Penelope 14 250 -344 2 594 2861 183 69 9 chr2RHet 1304589 1305255 -1983506 + DMCR1A LINE CR1 7 712 -3758 2 594 415 114 57 0 chr2RHet 1305276 1305346 -1983415 + DMCR1A LINE CR1 639 712 -3758 2 594 1079 136 130 5 chr2RHet 1305393 1305600 -1983161 + DMCR1A LINE CR1 975 1207 -3263 2 594 391 109 0 0 chr2RHet 1305599 1305654 -1983107 + DMRT1C LINE R1 2138 2192 -3251 2 594 779 65 168 8 chr2RHet 1305662 1305787 -1982974 + DMRT1C LINE R1 3581 3725 -1718 2 594 3462 71 37 4 chr2RHet 1305786 1306267 -1982494 + DMRT1C LINE R1 3634 4130 -1313 2 594 668 71 0 0 chr2RHet 1306263 1306347 -1982414 + DMRT1C LINE R1 4457 4540 -903 2 594 770 267 0 0 chr2RHet 1306423 1306603 -1982158 - Gypsy2_I LTR Gypsy -925 5210 5031 2 594 1274 244 59 17 chr2RHet 1306686 1307041 -1981720 - Gypsy2_I LTR Gypsy -1289 4846 4477 2 594 685 232 92 0 chr2RHet 1307041 1307205 -1981556 - Gypsy2_I LTR Gypsy -1829 4306 4128 2 594 2390 255 45 11 chr2RHet 1307371 1308138 -1980623 - Gypsy2_I LTR Gypsy -2616 4396 3246 2 594 5686 189 84 22 chr2RHet 1308133 1310632 -1978129 - Gypsy2_I LTR Gypsy -2961 3216 764 2 74 891 149 254 101 chr2RHet 1310651 1310927 -1977834 - Gypsy2_I LTR Gypsy -5817 318 1 2 595 963 183 100 36 chr2RHet 1311011 1311261 -1977500 - Gypsy2_LTR LTR Gypsy -84 269 4 2 595 2414 19 0 0 chr2RHet 1311612 1311878 -1976883 - Invader2_LTR LTR Gypsy 0 266 1 2 595 40204 9 3 2 chr2RHet 1311878 1316444 -1972317 - Invader2_I LTR Gypsy 0 4592 20 2 595 3888 299 59 16 chr2RHet 1316677 1318143 -1970618 + NINJA_I LTR Pao 2898 4426 -1585 2 595 2584 297 34 15 chr2RHet 1318217 1319218 -1969543 + NINJA_I LTR Pao 4992 6011 0 2 595 4166 294 62 14 chr2RHet 1319499 1321009 -1967752 + NINJA_I LTR Pao 2898 4480 -1531 2 595 2584 297 34 15 chr2RHet 1321062 1322063 -1966698 + NINJA_I LTR Pao 4992 6011 0 2 595 22 0 0 0 chr2RHet 1323252 1323274 -1965487 + AT_rich Low_complexity Low_complexity 1 22 0 2 595 212 134 14 56 chr2RHet 1323315 1323386 -1965375 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 595 625 96 21 0 chr2RHet 1323391 1323485 -1965276 + DNAREP1_DM LINE Penelope 497 592 -2 2 595 835 157 344 0 chr2RHet 1323566 1323778 -1964983 + DMCR1A LINE CR1 1865 2149 -2321 2 595 1434 104 200 0 chr2RHet 1323794 1324054 -1964707 + DNAREP1_DM LINE Penelope 165 476 -118 2 595 598 205 104 60 chr2RHet 1324226 1324408 -1964353 - DNAREP1_DM LINE Penelope -404 190 1 2 595 32 57 0 0 chr2RHet 1324546 1324599 -1964162 + AT_rich Low_complexity Low_complexity 1 53 0 2 595 742 119 108 42 chr2RHet 1324854 1325020 -1963741 - DNAREP1_DM LINE Penelope -417 177 1 2 595 537 84 0 0 chr2RHet 1325140 1325211 -1963550 - DNAREP1_DM LINE Penelope -2 592 522 2 595 392 119 17 0 chr2RHet 1325354 1325413 -1963348 + DMRT1C LINE R1 3839 3898 -1545 2 595 2700 110 122 0 chr2RHet 1325410 1325908 -1962853 + DMRT1C LINE R1 4046 4604 -839 2 595 250 105 0 0 chr2RHet 1326018 1326056 -1962705 + DMRT1C LINE R1 4567 4604 -839 2 595 268 244 39 0 chr2RHet 1326179 1326257 -1962504 + DOC LINE Jockey 4356 4436 -289 2 595 639 269 202 9 chr2RHet 1326588 1326925 -1961836 - TRANSPAC_I LTR Gypsy -3586 1004 603 2 595 1199 99 118 21 chr2RHet 1327144 1327382 -1961379 - FB4_DM DNA Tc1 -1329 2760 2500 2 595 1772 134 26 23 chr2RHet 1327379 1327685 -1961076 - FB4_DM DNA Tc1 -2287 1802 1496 2 595 807 108 127 1 chr2RHet 1327674 1327820 -1960941 + DNAREP1_DM LINE Penelope 83 289 -305 2 595 21 57 0 0 chr2RHet 1328329 1328364 -1960397 + AT_rich Low_complexity Low_complexity 1 35 0 2 595 22 35 0 0 chr2RHet 1328552 1328581 -1960180 + AT_rich Low_complexity Low_complexity 1 29 0 2 595 189 230 0 0 chr2RHet 1328720 1328794 -1959967 + (TTAA)n Simple_repeat Simple_repeat 1 74 0 2 595 738 0 112 0 chr2RHet 1328842 1329093 -1959668 + (TAA)n Simple_repeat Simple_repeat 1 279 0 2 595 32 26 0 0 chr2RHet 1329093 1329132 -1959629 + AT_rich Low_complexity Low_complexity 1 39 0 2 595 1748 64 8 12 chr2RHet 1329134 1329386 -1959375 + DMCR1A LINE CR1 2 252 -4218 2 595 514 33 0 0 chr2RHet 1329375 1329436 -1959325 + DMCR1A LINE CR1 361 421 -4049 2 595 9051 47 35 15 chr2RHet 1329436 1330569 -1958192 + DMCR1A LINE CR1 577 1732 -2738 2 595 10436 52 51 5 chr2RHet 1330565 1332913 -1955848 + DMCR1A LINE CR1 1978 4433 -37 2 595 304 75 48 36 chr2RHet 1332916 1332999 -1955762 + (TATAA)n Simple_repeat Simple_repeat 2 85 0 2 595 323 297 40 26 chr2RHet 1333255 1333407 -1955354 + NINJA_I LTR Pao 5710 5863 -148 2 595 898 170 94 66 chr2RHet 1333716 1334075 -1954686 + DNAREP1_DM LINE Penelope 98 594 0 2 595 1527 92 83 8 chr2RHet 1334074 1334326 -1954435 + DNAREP1_DM LINE Penelope 1 271 -323 2 595 1277 200 210 26 chr2RHet 1334364 1334935 -1953826 - PROTOP DNA P -3804 676 1 2 595 234 205 90 67 chr2RHet 1336428 1336517 -1952244 + DNAREP1_DM LINE Penelope 45 135 -459 2 595 445 172 92 0 chr2RHet 1336816 1336903 -1951858 + DMCR1A LINE CR1 3589 3683 -787 2 595 209 57 29 0 chr2RHet 1336903 1336938 -1951823 + (TTA)n Simple_repeat Simple_repeat 1 36 0 2 595 1037 92 247 0 chr2RHet 1336938 1337181 -1951580 + DMCR1A LINE CR1 3810 4112 -358 2 595 592 271 29 0 chr2RHet 1337709 1337943 -1950818 + Gypsy8_I LTR Gypsy 1836 1935 -2412 2 595 11531 55 46 13 chr2RHet 1337960 1339636 -1949125 + DMCR1A LINE CR1 1 1732 -2738 2 595 8037 54 40 7 chr2RHet 1339636 1341706 -1947055 + DMCR1A LINE CR1 1983 4119 -351 2 595 3439 20 49 0 chr2RHet 1341706 1342114 -1946647 - ROO_LTR LTR Pao 0 428 1 2 595 2254 22 0 0 chr2RHet 1342114 1342390 -1946371 - ROO_I LTR Pao 0 8256 7981 2 595 2442 78 32 20 chr2RHet 1342391 1342807 -1945954 - Gypsy6A_LTR LTR Gypsy 0 420 1 2 595 47101 10 0 4 chr2RHet 1342809 1348073 -1940688 - Gypsy6_I LTR Gypsy 0 7012 1767 2 595 8237 45 14 40 chr2RHet 1348075 1349596 -1939165 - Gypsy6_I LTR Gypsy -5398 1614 1 2 595 2442 79 33 20 chr2RHet 1349596 1350005 -1938756 - Gypsy6A_LTR LTR Gypsy 0 420 8 2 595 57936 16 4 0 chr2RHet 1350003 1356749 -1932012 - ROO_I LTR Pao -271 7985 1213 2 595 9454 20 0 1 chr2RHet 1356749 1357855 -1930906 + PROTOP_A DNA P 1 1105 0 2 595 6006 24 48 14 chr2RHet 1357855 1358943 -1929818 - ROO_I LTR Pao -7036 1220 1 2 595 3643 30 2 0 chr2RHet 1358943 1359370 -1929391 - ROO_LTR LTR Pao 0 428 1 2 595 272 78 196 0 chr2RHet 1359370 1359419 -1929342 + DMCR1A LINE CR1 4115 4173 -297 2 595 225 330 51 0 chr2RHet 1359445 1359563 -1929198 + Ulysses_I LTR Gypsy 2316 2439 -3942 2 595 301 256 65 43 chr2RHet 1360155 1360294 -1928467 - Copia_I LTR Copia -417 4176 4035 2 595 395 152 12 12 chr2RHet 1360310 1360390 -1928371 - Copia_I LTR Copia -616 3977 3898 2 595 517 253 78 0 chr2RHet 1360401 1360567 -1928194 - Copia_I LTR Copia -950 3643 3465 2 595 382 75 62 0 chr2RHet 1360569 1360649 -1928112 + (TA)n Simple_repeat Simple_repeat 2 86 0 2 595 771 319 22 29 chr2RHet 1360739 1361152 -1927609 - Copia_I LTR Copia -3885 708 299 2 595 24 0 0 0 chr2RHet 1361369 1361393 -1927368 + AT_rich Low_complexity Low_complexity 1 24 0 2 595 225 330 51 0 chr2RHet 1362299 1362417 -1926344 - Ulysses_I LTR Gypsy -3942 2439 2316 2 595 291 39 196 0 chr2RHet 1362443 1362492 -1926269 - DMCR1A LINE CR1 -297 4173 4115 2 595 3729 21 2 0 chr2RHet 1362492 1362919 -1925842 + ROO_LTR LTR Pao 1 428 0 2 595 2165 81 39 6 chr2RHet 1362919 1363230 -1925531 - DMCR1A LINE CR1 -351 4119 3799 2 595 10242 22 4 2 chr2RHet 1363222 1364446 -1924315 + ROO_I LTR Pao 7031 8256 0 2 595 3726 21 2 0 chr2RHet 1364446 1364873 -1923888 + ROO_LTR LTR Pao 1 428 0 2 595 4007 64 25 18 chr2RHet 1364919 1365476 -1923285 - FW3_DM LINE Jockey -1763 1369 809 2 595 3208 78 96 52 chr2RHet 1365488 1366028 -1922733 - FW3_DM LINE Jockey -2474 658 95 2 595 475 145 248 8 chr2RHet 1366389 1366514 -1922247 - DMCR1A LINE CR1 -51 4419 4265 2 595 23 68 0 0 chr2RHet 1366913 1366957 -1921804 + AT_rich Low_complexity Low_complexity 1 44 0 2 595 259 207 6 91 chr2RHet 1367192 1367357 -1921404 + A-rich Low_complexity Low_complexity 1 151 0 2 595 2141 182 101 3 chr2RHet 1367435 1367936 -1920825 + DM297_I LTR Gypsy 344 876 -5236 2 595 30 0 0 0 chr2RHet 1367936 1367966 -1920795 + AT_rich Low_complexity Low_complexity 1 30 0 2 595 2362 217 90 26 chr2RHet 1368001 1369134 -1919627 + DM297_I LTR Gypsy 1315 2551 -3561 2 595 1485 127 243 51 chr2RHet 1369275 1369588 -1919173 - STALKER4_LTR LTR Gypsy -29 373 1 2 595 4428 145 86 13 chr2RHet 1369588 1370460 -1918301 + DM297_I LTR Gypsy 3302 4237 -1930 2 595 2705 129 109 15 chr2RHet 1370469 1371018 -1917743 + DM297_I LTR Gypsy 4431 5031 -1136 2 595 193 0 94 0 chr2RHet 1371208 1371240 -1917521 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 2 595 826 167 20 146 chr2RHet 1371617 1371870 -1916891 - Gypsy12A_LTR LTR Gypsy -880 1400 1180 2 595 630 349 15 8 chr2RHet 1371862 1372128 -1916633 - NOMAD_I LTR Gypsy -143 6429 6162 2 595 1976 96 142 27 chr2RHet 1372128 1372493 -1916268 - FW3_DM LINE Jockey -2631 501 95 2 595 475 145 248 8 chr2RHet 1372854 1372979 -1915782 - DMCR1A LINE CR1 -51 4419 4265 2 595 23 68 0 0 chr2RHet 1373378 1373422 -1915339 + AT_rich Low_complexity Low_complexity 1 44 0 2 595 2050 189 97 52 chr2RHet 1373773 1374392 -1914369 + DM297_I LTR Gypsy 228 874 -5293 2 595 30 0 0 0 chr2RHet 1374392 1374422 -1914339 + AT_rich Low_complexity Low_complexity 1 30 0 2 595 2349 217 90 26 chr2RHet 1374457 1375590 -1913171 + DM297_I LTR Gypsy 1315 2551 -3561 2 595 1485 127 243 51 chr2RHet 1375731 1376044 -1912717 - STALKER4_LTR LTR Gypsy -29 373 1 2 595 4447 144 86 13 chr2RHet 1376044 1376916 -1911845 + DM297_I LTR Gypsy 3302 4237 -1930 2 595 2684 130 113 15 chr2RHet 1376925 1377472 -1911289 + DM297_I LTR Gypsy 4431 5031 -1136 2 595 193 0 94 0 chr2RHet 1377662 1377694 -1911067 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 2 595 826 167 20 146 chr2RHet 1378071 1378324 -1910437 - Gypsy12A_LTR LTR Gypsy -880 1400 1180 2 595 969 330 14 6 chr2RHet 1378316 1378664 -1910097 - NOMAD_I LTR Gypsy -143 6429 6079 2 595 367 41 0 0 chr2RHet 1378751 1378800 -1909961 + DM297_I LTR Gypsy 4714 4762 -1405 2 595 695 113 26 9 chr2RHet 1378823 1378939 -1909822 - Gypsy12A_LTR LTR Gypsy -156 2124 2007 2 595 623 134 442 0 chr2RHet 1379021 1379222 -1909539 - Gypsy12A_LTR LTR Gypsy -1180 1100 811 2 595 4091 30 16 16 chr2RHet 1379233 1379743 -1909018 + PROTOP DNA P 48 557 -3923 2 595 8501 25 46 0 chr2RHet 1379732 1380791 -1907970 + PROTOP DNA P 3373 4480 0 2 595 1479 246 97 85 chr2RHet 1380791 1381595 -1907166 - Gypsy12A_LTR LTR Gypsy -1464 816 3 2 595 6533 112 22 55 chr2RHet 1381605 1382677 -1906084 - Gypsy12_I LTR Gypsy -3 5543 4507 2 595 5155 134 9 1 chr2RHet 1382679 1383448 -1905313 - Gypsy12_I LTR Gypsy -1284 4262 3488 2 595 1863 101 76 10 chr2RHet 1383804 1384105 -1904656 - MAX_LTR LTR Pao 0 321 1 2 595 2042 47 66 0 chr2RHet 1384108 1384382 -1904379 - MAX_I LTR Pao -1 7913 7622 2 595 17642 67 36 146 chr2RHet 1384381 1387780 -1900981 - MAX_I LTR Pao -4889 3025 2 2 595 1896 91 76 10 chr2RHet 1387795 1388096 -1900665 - MAX_LTR LTR Pao 0 321 1 2 595 10485 132 26 9 chr2RHet 1388205 1389942 -1898819 - Gypsy12_I LTR Gypsy -2049 3497 1732 2 595 4532 134 19 28 chr2RHet 1389940 1391253 -1897508 - Gypsy12_I LTR Gypsy -4189 1357 1 2 595 3939 146 48 83 chr2RHet 1391256 1392232 -1896529 - Gypsy12A_LTR LTR Gypsy -3 2277 1336 2 595 908 129 200 16 chr2RHet 1392232 1392477 -1896284 - Gypsy12A_LTR LTR Gypsy -1180 1100 811 2 595 3925 28 16 16 chr2RHet 1392488 1392998 -1895763 + PROTOP DNA P 48 557 -3923 2 595 8071 25 45 3 chr2RHet 1392987 1394050 -1894711 + PROTOP DNA P 3373 4480 0 2 595 781 224 50 49 chr2RHet 1394050 1394519 -1894242 - Gypsy12A_LTR LTR Gypsy -1486 850 418 2 595 6162 112 22 55 chr2RHet 1394578 1395650 -1893111 - Gypsy12_I LTR Gypsy -3 5543 4507 2 595 4794 140 9 1 chr2RHet 1395652 1396417 -1892344 - Gypsy12_I LTR Gypsy -1284 4262 3492 2 595 10485 132 26 9 chr2RHet 1396761 1398498 -1890263 - Gypsy12_I LTR Gypsy -2049 3497 1732 2 595 4532 134 19 28 chr2RHet 1398496 1399809 -1888952 - Gypsy12_I LTR Gypsy -4189 1357 1 2 595 3939 146 48 83 chr2RHet 1399812 1400788 -1887973 - Gypsy12A_LTR LTR Gypsy -3 2277 1336 2 595 908 129 200 16 chr2RHet 1400788 1401033 -1887728 - Gypsy12A_LTR LTR Gypsy -1180 1100 811 2 595 3925 28 16 16 chr2RHet 1401044 1401554 -1887207 + PROTOP DNA P 48 557 -3923 2 595 8071 25 45 3 chr2RHet 1401543 1402606 -1886155 + PROTOP DNA P 3373 4480 0 2 595 781 224 50 49 chr2RHet 1402606 1403075 -1885686 - Gypsy12A_LTR LTR Gypsy -1486 850 418 2 595 6162 112 22 55 chr2RHet 1403134 1404206 -1884555 - Gypsy12_I LTR Gypsy -3 5543 4507 2 595 4777 141 9 1 chr2RHet 1404208 1404973 -1883788 - Gypsy12_I LTR Gypsy -1284 4262 3492 2 595 10485 132 26 9 chr2RHet 1405317 1407054 -1881707 - Gypsy12_I LTR Gypsy -2049 3497 1732 2 595 4508 134 19 26 chr2RHet 1407052 1408363 -1880398 - Gypsy12_I LTR Gypsy -4189 1357 1 2 595 3651 189 116 91 chr2RHet 1408366 1409963 -1878798 - Gypsy12A_LTR LTR Gypsy -3 2277 642 2 595 234 61 0 0 chr2RHet 1409993 1410026 -1878735 - Gypsy12A_LTR LTR Gypsy -1832 448 416 2 595 835 143 7 0 chr2RHet 1410155 1410302 -1878459 - Gypsy12A_LTR LTR Gypsy -2107 173 26 2 595 5524 110 18 3 chr2RHet 1410304 1411382 -1877379 + DM297_I LTR Gypsy 5067 6249 -171 2 595 1138 158 48 37 chr2RHet 1411384 1411666 -1877095 + DM297_LTR LTR Gypsy 125 474 0 2 595 2932 101 133 6 chr2RHet 1412709 1413236 -1875525 - DNAREP1_DM LINE Penelope 0 594 1 2 595 6522 68 41 3 chr2RHet 1413418 1414369 -1874392 + DMCR1A LINE CR1 3187 4173 -297 2 595 1619 54 9 0 chr2RHet 1414962 1415183 -1873578 + DMCR1A LINE CR1 3243 3465 -1005 2 595 650 242 35 52 chr2RHet 1415256 1415487 -1873274 + DMLTR5 LTR Gypsy 40 266 0 2 595 255 65 22 0 chr2RHet 1415486 1415532 -1873229 + HMSBEAGLE_I LTR Gypsy 1 47 -6482 2 595 39 22 0 0 chr2RHet 1415569 1415615 -1873146 + AT_rich Low_complexity Low_complexity 1 46 0 2 595 870 209 44 0 chr2RHet 1415766 1415948 -1872813 + HMSBEAGLE_I LTR Gypsy 1212 1401 -5128 2 595 870 44 0 0 chr2RHet 1415959 1416072 -1872689 + BS2 LINE Jockey 11 123 -4598 2 595 2343 126 35 5 chr2RHet 1416193 1416593 -1872168 + BS2 LINE Jockey 345 756 -3965 2 595 1568 116 208 4 chr2RHet 1416604 1417103 -1871658 + BS2 LINE Jockey 826 1426 -3295 2 595 3862 69 143 0 chr2RHet 1417106 1417685 -1871076 + BS2 LINE Jockey 1826 2487 -2234 2 595 5038 54 107 0 chr2RHet 1417679 1418881 -1869880 + BS2 LINE Jockey 2908 4238 -483 2 595 720 51 0 0 chr2RHet 1418880 1418978 -1869783 + BS2 LINE Jockey 4543 4640 -81 2 595 6764 156 73 13 chr2RHet 1418987 1420279 -1868482 + HMSBEAGLE_I LTR Gypsy 1659 3028 -3501 2 595 488 90 0 0 chr2RHet 1420576 1420643 -1868118 - HMSBEAGLE_I LTR Gypsy -4804 1725 1659 2 595 720 51 0 0 chr2RHet 1420652 1420750 -1868011 - BS2 LINE Jockey -81 4640 4543 2 595 369 22 0 0 chr2RHet 1420749 1420795 -1867966 - BS2 LINE Jockey -483 4238 4193 2 595 7059 47 22 2 chr2RHet 1421564 1422686 -1866075 - MDG1_I LTR Gypsy -101 6796 5321 2 595 15010 0 0 0 chr2RHet 1422686 1424414 -1864347 + BARI_DM DNA Tc1 1 1728 0 2 595 17968 46 4 5 chr2RHet 1424414 1426793 -1861968 - MDG1_I LTR Gypsy -1276 5320 2944 2 595 2349 0 0 4 chr2RHet 1426812 1427088 -1861673 + BURDOCK_LTR LTR Gypsy 1 275 0 2 595 6879 4 0 0 chr2RHet 1427088 1427900 -1860861 + BURDOCK_I LTR Gypsy 1 812 -5048 2 595 10432 0 1 1 chr2RHet 1427899 1429109 -1859652 + BURDOCK_I LTR Gypsy 4651 5860 0 2 595 2349 0 0 4 chr2RHet 1429110 1429386 -1859375 + BURDOCK_LTR LTR Gypsy 1 275 0 2 595 3658 57 83 2 chr2RHet 1429397 1429925 -1858836 - MDG1_I LTR Gypsy -3657 2939 2369 2 595 4053 66 43 5 chr2RHet 1429939 1430521 -1858240 - MDG1_I LTR Gypsy -4352 2244 1641 2 595 522 76 0 0 chr2RHet 1430516 1430595 -1858166 - MDG1_I LTR Gypsy -5057 1539 1461 2 595 45091 11 6 2 chr2RHet 1430600 1435981 -1852780 - IVK_DM LINE I 0 5402 1 2 595 1639 86 0 12 chr2RHet 1435981 1436240 -1852521 - MDG1_I LTR Gypsy -5124 1472 1217 2 595 482 93 83 0 chr2RHet 1436423 1436531 -1852230 - MDG1_I LTR Gypsy -5354 1242 1126 2 595 576 169 78 12 chr2RHet 1436542 1436693 -1852068 - MDG1_I LTR Gypsy -5480 1116 839 2 595 983 107 114 45 chr2RHet 1436691 1436936 -1851825 - MDG1_I LTR Gypsy -5678 918 657 2 595 2742 122 55 6 chr2RHet 1437080 1437567 -1851194 - MDG1_I LTR Gypsy -6012 584 74 2 595 250 173 38 51 chr2RHet 1437795 1437874 -1850887 - DM412B_LTR LTR Gypsy -262 309 232 2 595 3078 221 19 4 chr2RHet 1438011 1438730 -1850031 + HMSBEAGLE_I LTR Gypsy 3025 3754 -2775 2 595 3731 141 51 0 chr2RHet 1438728 1439374 -1849387 + HMSBEAGLE_I LTR Gypsy 5105 5783 -746 2 595 936 242 35 111 chr2RHet 1439715 1440120 -1848641 + HMSBEAGLE_I LTR Gypsy 5813 6186 -343 2 595 747 237 36 14 chr2RHet 1440195 1440417 -1848344 + DMLTR5 LTR Gypsy 40 266 0 2 595 7503 52 14 0 chr2RHet 1440417 1441412 -1847349 + DMCR1A LINE CR1 3462 4470 0 2 74 2818 179 146 74 chr2RHet 1441435 1442988 -1845773 - Gypsy12A_LTR LTR Gypsy -538 1742 78 2 596 1527 268 69 12 chr2RHet 1442997 1443507 -1845254 + DMRT1A LINE R1 1431 1969 -3214 2 596 937 161 49 0 chr2RHet 1443572 1443734 -1845027 + DMRT1A LINE R1 2477 2646 -2537 2 596 949 224 14 0 chr2RHet 1443743 1443957 -1844804 + DMRT1A LINE R1 2773 2989 -2194 2 596 952 200 44 20 chr2RHet 1445033 1445237 -1843524 + DMRT1A LINE R1 3250 3458 -1725 2 596 599 48 0 0 chr2RHet 1445358 1445463 -1843298 + Mariner2_DM DNA Tc1 774 912 0 2 596 411 282 57 46 chr2RHet 1445463 1445738 -1843023 + TOM_I LTR Gypsy 5808 6085 -27 2 596 383 318 17 17 chr2RHet 1445813 1445989 -1842772 + Invader6_I LTR Gypsy 2458 2633 -1466 2 596 21 57 0 0 chr2RHet 1446241 1446276 -1842485 + AT_rich Low_complexity Low_complexity 1 35 0 2 596 1397 323 22 6 chr2RHet 1446425 1446967 -1841794 + NOMAD_I LTR Gypsy 1321 1871 -4701 2 596 634 301 8 8 chr2RHet 1447402 1447643 -1841118 + NOMAD_I LTR Gypsy 2355 2595 -3977 2 596 362 294 460 9 chr2RHet 1447757 1448064 -1840697 + NOMAD_I LTR Gypsy 2805 3250 -3322 2 596 1766 313 8 13 chr2RHet 1448117 1448739 -1840022 + NOMAD_I LTR Gypsy 3607 4225 -2347 2 596 1463 85 0 0 chr2RHet 1448973 1449162 -1839599 - Mariner2_DM DNA Tc1 -714 198 10 2 596 25 0 0 0 chr2RHet 1449195 1449220 -1839541 + AT_rich Low_complexity Low_complexity 1 25 0 2 596 400 156 78 0 chr2RHet 1449297 1449374 -1839387 - DMRT1C LINE R1 -596 4847 4765 2 596 665 200 217 10 chr2RHet 1449502 1449696 -1839065 + DMRT1A LINE R1 3489 3722 -1461 2 596 1420 220 42 0 chr2RHet 1449736 1450045 -1838716 + DMRT1A LINE R1 4400 4721 -462 2 596 394 247 336 10 chr2RHet 1450506 1450703 -1838058 + DMRT1A LINE R1 4729 4989 -194 2 596 629 133 35 9 chr2RHet 1450708 1450822 -1837939 + DMRT1A LINE R1 5040 5156 -27 2 596 23 0 0 0 chr2RHet 1450915 1450938 -1837823 + AT_rich Low_complexity Low_complexity 1 23 0 2 596 252 275 181 0 chr2RHet 1451379 1451517 -1837244 + BS2 LINE Jockey 57 219 -4502 2 596 1307 307 34 5 chr2RHet 1451650 1452092 -1836669 + BS2 LINE Jockey 680 1134 -3587 2 596 1057 285 3 7 chr2RHet 1452114 1452421 -1836340 + BS2 LINE Jockey 1064 1369 -3352 2 596 545 262 0 0 chr2RHet 1452431 1452557 -1836204 + BS2 LINE Jockey 1746 1871 -2850 2 596 642 281 70 0 chr2RHet 1452556 1452755 -1836006 + BS2 LINE Jockey 2346 2558 -2163 2 596 1011 187 69 0 chr2RHet 1452873 1453076 -1835685 + BS2 LINE Jockey 3194 3410 -1311 2 596 1489 292 95 2 chr2RHet 1453074 1453589 -1835172 + BS2 LINE Jockey 3594 4156 -565 2 596 3006 136 0 0 chr2RHet 1453648 1454096 -1834665 - IVK_DM LINE I -433 4969 4522 2 596 626 112 206 0 chr2RHet 1454123 1454230 -1834531 - STALKER4_LTR LTR Gypsy -29 373 245 2 596 1415 105 61 9 chr2RHet 1454230 1454442 -1834319 - DMLTR5 LTR Gypsy 0 266 44 2 596 234 224 0 0 chr2RHet 1454486 1454535 -1834226 - DMLTR5 LTR Gypsy -217 49 1 2 596 1230 113 0 30 chr2RHet 1454536 1454736 -1834025 - HMSBEAGLE_I LTR Gypsy -1 6528 6335 2 596 3680 70 31 31 chr2RHet 1454893 1455437 -1833324 - HMSBEAGLE_I LTR Gypsy -163 6366 5823 2 596 4905 41 3 2 chr2RHet 1455436 1456020 -1832741 - HMSBEAGLE_I LTR Gypsy -2207 4322 3738 2 596 1074 65 436 8 chr2RHet 1456018 1456261 -1832500 - HMSBEAGLE_I LTR Gypsy -2946 3583 3237 2 596 13091 69 121 9 chr2RHet 1456265 1458123 -1830638 - HMSBEAGLE_I LTR Gypsy -3573 2956 891 2 596 773 47 0 54 chr2RHet 1458123 1458235 -1830526 + DMCR1A LINE CR1 1 106 -4364 2 596 6495 37 0 4 chr2RHet 1458240 1458997 -1829764 + DMCR1A LINE CR1 258 1011 -3459 2 596 731 142 17 0 chr2RHet 1458982 1459102 -1829659 + DMCR1A LINE CR1 3650 3771 -699 2 596 831 298 138 9 chr2RHet 1459111 1459545 -1829216 + HMSBEAGLE_I LTR Gypsy 3468 3957 -2572 2 596 32 26 0 0 chr2RHet 1459547 1459586 -1829175 + AT_rich Low_complexity Low_complexity 1 39 0 2 596 2459 28 0 0 chr2RHet 1459758 1460040 -1828721 + ROOA_LTR LTR Pao 105 386 0 2 596 7082 45 96 28 chr2RHet 1460040 1461027 -1827734 + ROOA_I LTR Pao 1 1054 -5795 2 596 10997 44 60 5 chr2RHet 1461026 1463323 -1825438 + ROOA_I LTR Pao 2925 5346 -1503 2 596 254 65 0 0 chr2RHet 1463465 1463496 -1825265 + ROOA_I LTR Pao 6805 6835 -14 2 596 3093 32 40 3 chr2RHet 1463507 1463879 -1824882 + ROOA_LTR LTR Pao 1 386 0 2 596 788 61 252 0 chr2RHet 1463881 1463996 -1824765 - DMLTR5 LTR Gypsy -83 183 40 2 596 1577 84 28 0 chr2RHet 1464083 1464296 -1824465 - STALKER4_LTR LTR Gypsy -154 248 30 2 596 22 35 0 0 chr2RHet 1464298 1464327 -1824434 + AT_rich Low_complexity Low_complexity 1 29 0 2 596 4320 8 8 45 chr2RHet 1464327 1464854 -1823907 - DM176_LTR LTR Gypsy 0 507 1 2 596 55558 8 14 3 chr2RHet 1464854 1470697 -1818064 - DM176_I LTR Gypsy 0 6420 502 2 596 181 30 29 57 chr2RHet 1470697 1470732 -1818029 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2 596 55558 8 14 3 chr2RHet 1470732 1471236 -1817525 - DM176_I LTR Gypsy -5919 501 1 2 596 4258 14 8 45 chr2RHet 1471236 1471763 -1816998 - DM176_LTR LTR Gypsy 0 507 1 2 596 264 30 0 0 chr2RHet 1471764 1471797 -1816964 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 596 349 182 20 150 chr2RHet 1471805 1472047 -1816714 - STALKER4_I LTR Gypsy -16 6514 6305 2 596 3131 49 1 25 chr2RHet 1472047 1472529 -1816232 - QUASIMODO_LTR LTR Gypsy 0 658 54 2 596 225 0 0 0 chr2RHet 1472529 1472554 -1816207 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 596 328 148 0 0 chr2RHet 1472585 1472646 -1816115 - STALKER4_I LTR Gypsy -293 6237 6177 2 596 4508 56 3 7 chr2RHet 1472720 1473298 -1815463 - Stalker2_I LTR Gypsy -1580 4950 4375 2 596 11878 119 55 12 chr2RHet 1473321 1475987 -1812774 - Stalker2_I LTR Gypsy -3203 4199 1085 2 596 2831 180 11 48 chr2RHet 1476023 1476630 -1812131 - Stalker2_I LTR Gypsy -5711 819 235 2 596 687 91 0 39 chr2RHet 1476758 1476861 -1811900 - STALKER4_LTR LTR Gypsy -29 373 275 2 596 2486 81 37 35 chr2RHet 1476859 1477255 -1811506 + Gypsy6A_LTR LTR Gypsy 12 420 0 2 596 7094 48 24 43 chr2RHet 1477255 1478204 -1810557 + Gypsy3_I LTR Gypsy 1 931 -5246 2 596 1416 90 0 0 chr2RHet 1478199 1478387 -1810374 - IVK_DM LINE I -1243 4159 3972 2 596 827 40 0 0 chr2RHet 1478381 1478480 -1810281 - IVK_DM LINE I -1554 3848 3750 2 596 12503 97 116 7 chr2RHet 1478479 1481046 -1807715 - IVK_DM LINE I -2555 2847 1 2 596 25 90 0 0 chr2RHet 1481679 1481746 -1807015 + AT_rich Low_complexity Low_complexity 1 67 0 2 596 33 66 0 0 chr2RHet 1482249 1482310 -1806451 + AT_rich Low_complexity Low_complexity 1 61 0 2 596 2294 117 37 6 chr2RHet 1482433 1483072 -1805689 + Gypsy3_I LTR Gypsy 5654 6177 0 2 596 2486 81 37 37 chr2RHet 1483072 1483479 -1805282 + Gypsy6A_LTR LTR Gypsy 1 420 0 2 596 24743 106 33 44 chr2RHet 1483479 1490078 -1798683 + Gypsy3_I LTR Gypsy 1 7012 0 2 596 2486 81 37 37 chr2RHet 1490080 1490487 -1798274 + Gypsy6A_LTR LTR Gypsy 1 420 0 2 596 7094 48 24 43 chr2RHet 1490487 1491436 -1797325 + Gypsy3_I LTR Gypsy 1 931 -5246 2 596 1416 90 0 0 chr2RHet 1491431 1491619 -1797142 - IVK_DM LINE I -1243 4159 3972 2 596 827 40 0 0 chr2RHet 1491613 1491712 -1797049 - IVK_DM LINE I -1554 3848 3750 2 596 12503 97 116 7 chr2RHet 1491711 1494278 -1794483 - IVK_DM LINE I -2555 2847 1 2 596 25 90 0 0 chr2RHet 1494911 1494978 -1793783 + AT_rich Low_complexity Low_complexity 1 67 0 2 596 33 66 0 0 chr2RHet 1495481 1495542 -1793219 + AT_rich Low_complexity Low_complexity 1 61 0 2 596 2294 126 46 6 chr2RHet 1495665 1496304 -1792457 + Gypsy3_I LTR Gypsy 5654 6177 0 2 596 2486 81 37 37 chr2RHet 1496304 1496711 -1792050 + Gypsy6A_LTR LTR Gypsy 1 420 0 2 596 7094 48 24 43 chr2RHet 1496711 1497660 -1791101 + Gypsy3_I LTR Gypsy 1 931 -5246 2 596 1416 90 0 0 chr2RHet 1497655 1497843 -1790918 - IVK_DM LINE I -1243 4159 3972 2 596 827 40 0 0 chr2RHet 1497837 1497936 -1790825 - IVK_DM LINE I -1554 3848 3750 2 596 9738 64 9 0 chr2RHet 1497935 1499170 -1789591 - IVK_DM LINE I -2555 2847 1602 2 596 1016 8 8 0 chr2RHet 1534607 1534734 -1754027 - Invader2_I LTR Gypsy -4464 128 1 2 596 2361 15 0 0 chr2RHet 1534734 1535000 -1753761 - Invader2_LTR LTR Gypsy 0 266 1 2 596 38977 9 8 1 chr2RHet 1535000 1539562 -1749199 - Invader2_I LTR Gypsy 0 4592 1 2 596 2361 15 0 0 chr2RHet 1539562 1539828 -1748933 - Invader2_LTR LTR Gypsy 0 266 1 2 596 38955 8 9 2 chr2RHet 1539828 1544388 -1744373 - Invader2_I LTR Gypsy 0 4592 1 2 596 433 59 15 0 chr2RHet 1544408 1544476 -1744285 + DMCR1A LINE CR1 211 279 -4191 2 596 31 58 0 0 chr2RHet 1545803 1545855 -1742906 + AT_rich Low_complexity Low_complexity 1 52 0 2 596 756 54 0 0 chr2RHet 1545874 1545967 -1742794 - DNAREP1_DM LINE Penelope 0 594 502 2 596 1187 98 82 27 chr2RHet 1545967 1546187 -1742574 - Gypsy11_LTR LTR Gypsy 0 452 221 2 596 198 0 0 0 chr2RHet 1546187 1546209 -1742552 + (TATG)n Simple_repeat Simple_repeat 3 24 0 2 596 478 151 0 0 chr2RHet 1546211 1546284 -1742477 - Gypsy11_LTR LTR Gypsy -293 159 87 2 596 5984 144 24 26 chr2RHet 1546265 1547830 -1740931 - STALKER4_I LTR Gypsy -304 6593 5139 2 596 5815 60 71 52 chr2RHet 1547828 1548747 -1740014 - Gypsy11_I LTR Gypsy -1112 2412 1477 2 596 2432 139 44 12 chr2RHet 1548804 1549305 -1739456 - Gypsy11_I LTR Gypsy -2234 1290 774 2 596 2601 44 3 3 chr2RHet 1549333 1549677 -1739084 - FB4_DM DNA Tc1 -1329 2760 2417 2 596 4979 59 2 0 chr2RHet 1549676 1550321 -1738440 - FB4_DM DNA Tc1 -2336 1753 1108 2 596 2747 24 83 0 chr2RHet 1550321 1550657 -1738104 + Gypsy10_LTR LTR Gypsy 1 364 0 2 596 377 163 57 191 chr2RHet 1550689 1550886 -1737875 - Gypsy11_I LTR Gypsy -5790 806 595 2 596 1449 156 13 114 chr2RHet 1550885 1551270 -1737491 - Gypsy11_I LTR Gypsy -3176 348 3 2 596 1954 129 80 44 chr2RHet 1551272 1551685 -1737076 - Gypsy11_LTR LTR Gypsy 0 452 25 2 596 1010 102 190 11 chr2RHet 1551673 1551852 -1736909 - DNAREP1_DM LINE Penelope -104 490 280 2 596 212 0 36 0 chr2RHet 1551920 1551948 -1736813 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 596 201 100 19 39 chr2RHet 1552007 1552059 -1736702 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 596 493 178 242 15 chr2RHet 1552149 1552398 -1736363 - DNAREP1_DM LINE Penelope -281 313 8 2 596 21 0 0 0 chr2RHet 1552398 1552419 -1736342 + AT_rich Low_complexity Low_complexity 1 21 0 2 596 15170 121 96 16 chr2RHet 1552615 1555711 -1733050 + G5A_DM LINE Jockey 182 4635 -221 2 596 9729 49 40 3 chr2RHet 1555714 1557169 -1731592 + TRANSIB2 DNA Transib 16 1578 -1266 2 596 4141 44 45 22 chr2RHet 1557166 1557746 -1731015 + TRANSIB2 DNA Transib 2252 2844 0 2 596 758 109 0 32 chr2RHet 1557746 1557869 -1730892 + G5A_DM LINE Jockey 2677 2795 -46 2 596 262 263 0 34 chr2RHet 1557887 1557946 -1730815 - DNAREP1_DM LINE Penelope -262 332 276 2 596 2377 109 234 0 chr2RHet 1557997 1558438 -1730323 + DOC LINE Jockey 796 1339 -3386 2 596 1662 111 40 0 chr2RHet 1558437 1558689 -1730072 + DOC LINE Jockey 1488 1749 -2976 2 596 710 98 24 24 chr2RHet 1558693 1558803 -1729958 + DOC LINE Jockey 1991 2100 -2625 2 596 2389 44 24 0 chr2RHet 1558803 1559098 -1729663 + PROTOP DNA P 1 302 -4178 2 596 830 25 0 0 chr2RHet 1559095 1559214 -1729547 + PROTOP DNA P 627 746 -3734 2 596 705 46 0 0 chr2RHet 1559222 1559309 -1729452 + PROTOP DNA P 4317 4406 -74 2 596 657 76 103 19 chr2RHet 1559312 1559419 -1729342 + DOC LINE Jockey 2893 3008 -1717 2 596 453 67 0 0 chr2RHet 1559428 1559488 -1729273 + PROTOP DNA P 4345 4406 -74 2 596 4406 114 190 7 chr2RHet 1559491 1560950 -1727811 + DOC LINE Jockey 2893 4618 -107 2 596 16312 1 0 0 chr2RHet 1560959 1562762 -1725999 - FW_DM LINE Jockey 0 4692 2890 2 596 591 96 17 25 chr2RHet 1562760 1562878 -1725883 + DOC LINE Jockey 4607 4723 -2 2 596 867 168 65 56 chr2RHet 1562946 1563223 -1725538 + DM176_LTR LTR Gypsy 1 334 -173 2 596 32 57 0 0 chr2RHet 1563245 1563298 -1725463 + AT_rich Low_complexity Low_complexity 1 53 0 2 596 293 223 51 41 chr2RHet 1564429 1564527 -1724234 - BS3_DM LINE Jockey -304 1486 1388 2 596 284 219 57 0 chr2RHet 1564710 1564815 -1723946 + DNAREP1_DM LINE Penelope 118 228 -366 2 596 883 143 79 24 chr2RHet 1564965 1565338 -1723423 + DNAREP1_DM LINE Penelope 94 332 -262 2 596 803 230 90 90 chr2RHet 1565575 1565996 -1722765 + DM297_I LTR Gypsy 66 486 -5681 2 596 1779 188 0 0 chr2RHet 1566007 1566336 -1722425 + DM297_I LTR Gypsy 2334 2662 -3505 2 596 4153 180 135 2 chr2RHet 1566335 1567526 -1721235 + DM297_I LTR Gypsy 3040 4356 -1756 2 596 27 49 0 0 chr2RHet 1567527 1567568 -1721193 + AT_rich Low_complexity Low_complexity 1 41 0 2 596 962 278 121 26 chr2RHet 1567670 1568239 -1720522 + DM297_I LTR Gypsy 4783 5405 -707 2 596 431 239 123 0 chr2RHet 1568312 1568475 -1720286 + DM297_I LTR Gypsy 5628 5810 -302 2 596 696 107 45 0 chr2RHet 1568475 1568587 -1720174 - Mariner2_DM DNA Tc1 0 912 796 2 596 278 196 65 47 chr2RHet 1568578 1568685 -1720076 + DM297_I LTR Gypsy 5977 6085 -27 2 596 541 302 0 11 chr2RHet 1568751 1568932 -1719829 + Invader6_I LTR Gypsy 2457 2635 -1464 2 596 876 328 77 60 chr2RHet 1569231 1569950 -1718811 + NOMAD_I LTR Gypsy 1457 2187 -4385 2 596 633 325 117 16 chr2RHet 1569991 1570506 -1718255 + NOMAD_I LTR Gypsy 4701 5267 -1305 2 596 396 310 0 0 chr2RHet 1570729 1570842 -1717919 + NOMAD_I LTR Gypsy 5928 6040 -532 2 596 2000 69 18 0 chr2RHet 1571370 1571647 -1717114 + IDEFIX_LTR LTR Gypsy 313 594 0 2 596 253 289 8 30 chr2RHet 1571882 1572014 -1716747 + A-rich Low_complexity Low_complexity 4 132 0 2 596 2109 127 15 22 chr2RHet 1572084 1572469 -1716292 + IDEFIX_I LTR Gypsy 1 267 -5361 2 74 7027 51 44 7 chr2RHet 1572440 1573367 -1715394 + IDEFIX_I LTR Gypsy 601 1562 -4066 2 597 3509 33 7 7 chr2RHet 1573367 1573795 -1714966 + ROO_LTR LTR Pao 1 428 0 2 597 20084 119 45 57 chr2RHet 1573795 1577916 -1710845 + IDEFIX_I LTR Gypsy 1558 5628 0 2 597 3951 59 20 25 chr2RHet 1577916 1578469 -1710292 + IDEFIX_LTR LTR Gypsy 1 550 -44 2 597 207 141 47 0 chr2RHet 1578491 1578555 -1710206 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 597 2588 50 57 2 chr2RHet 1578555 1579063 -1709698 + QUASIMODO_LTR LTR Gypsy 1 658 0 2 597 2489 14 28 0 chr2RHet 1579063 1579351 -1709410 + QUASIMODO_I LTR Gypsy 1 296 -5764 2 597 7973 19 46 0 chr2RHet 1579348 1580322 -1708439 + QUASIMODO_I LTR Gypsy 554 1572 -4488 2 597 6206 110 45 48 chr2RHet 1580322 1581478 -1707283 + PROTOP_B DNA P 1 1153 0 2 597 1139 8 0 0 chr2RHet 1581479 1581612 -1707149 + QUASIMODO_I LTR Gypsy 1567 1699 -4361 2 597 2550 17 0 0 chr2RHet 1583826 1584113 -1704648 + Gypsy4_LTR LTR Gypsy 1 287 0 2 597 36418 8 24 0 chr2RHet 1584113 1590257 -1698504 + Gypsy4_I LTR Gypsy 1 6288 0 2 597 2514 24 0 0 chr2RHet 1590257 1590544 -1698217 + Gypsy4_LTR LTR Gypsy 1 287 0 2 597 12789 21 8 4 chr2RHet 1591654 1593271 -1695490 + QUASIMODO_I LTR Gypsy 1705 3417 -2643 2 597 19492 7 0 5 chr2RHet 1593292 1595645 -1693116 + QUASIMODO_I LTR Gypsy 3719 6060 0 2 597 1930 0 0 0 chr2RHet 1595645 1595867 -1692894 + QUASIMODO_LTR LTR Gypsy 1 222 -436 2 597 2536 261 95 29 chr2RHet 1595875 1597304 -1691457 - QUASIMODO_I LTR Gypsy -364 5696 4174 2 597 1181 244 128 27 chr2RHet 1597303 1597931 -1690830 - QUASIMODO_I LTR Gypsy -1999 4061 3330 2 597 307 176 40 0 chr2RHet 1597948 1598022 -1690739 - IDEFIX_I LTR Gypsy -2792 2836 2760 2 597 1954 265 5 3 chr2RHet 1598025 1598623 -1690138 - QUASIMODO_I LTR Gypsy -3083 2977 2379 2 597 2181 282 69 39 chr2RHet 1598635 1600221 -1688540 - QUASIMODO_I LTR Gypsy -3808 2252 620 2 597 41890 2 5 0 chr2RHet 1600229 1604894 -1683867 + FW_DM LINE Jockey 1 4689 -3 2 597 324 274 43 47 chr2RHet 1604903 1605114 -1683647 - QUASIMODO_I LTR Gypsy -5452 608 399 2 597 794 105 41 0 chr2RHet 1605469 1605641 -1683120 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 597 8529 33 1 52 chr2RHet 1606088 1607253 -1681508 - PROTOP_A DNA P 0 1105 1 2 597 1177 8 0 0 chr2RHet 1607963 1608093 -1680668 + PROTOP DNA P 1 130 -4350 2 597 440 0 0 0 chr2RHet 1608099 1608148 -1680613 - PROTOP_A DNA P -1056 49 1 2 597 31283 8 31 0 chr2RHet 1608945 1614384 -1674377 - Gypsy4_I LTR Gypsy -649 5639 1 2 597 2439 17 0 0 chr2RHet 1614384 1614671 -1674090 - Gypsy4_LTR LTR Gypsy 0 287 1 2 597 1094 8 0 0 chr2RHet 1616851 1616984 -1671777 - QUASIMODO_I LTR Gypsy -4361 1699 1567 2 597 6606 60 49 63 chr2RHet 1616985 1618106 -1670655 - PROTOP_A DNA P 0 1105 1 2 597 1731 127 22 29 chr2RHet 1618631 1619026 -1669735 + DNAREP1_DM LINE Penelope 8 321 -273 2 597 1560 107 4 4 chr2RHet 1619047 1619292 -1669469 + DNAREP1_DM LINE Penelope 211 455 -139 2 597 643 13 0 0 chr2RHet 1619296 1619374 -1669387 + DNAREP1_DM LINE Penelope 502 579 -15 2 597 26 30 0 0 chr2RHet 1619399 1619432 -1669329 + AT_rich Low_complexity Low_complexity 1 33 0 2 597 2933 54 106 5 chr2RHet 1619846 1620515 -1668246 - TC1-2_DM DNA Tc1 0 1644 908 2 597 2877 51 122 3 chr2RHet 1620528 1621295 -1667466 - TC1-2_DM DNA Tc1 -785 859 1 2 597 570 126 0 0 chr2RHet 1621296 1621391 -1667370 + DNAREP1_DM LINE Penelope 500 594 0 2 597 22 0 0 0 chr2RHet 1621432 1621454 -1667307 + AT_rich Low_complexity Low_complexity 1 22 0 2 597 27 62 0 0 chr2RHet 1622254 1622302 -1666459 + AT_rich Low_complexity Low_complexity 1 48 0 2 597 2686 165 89 67 chr2RHet 1622305 1623071 -1665690 + DM297_I LTR Gypsy 358 1140 -5027 2 597 703 202 80 0 chr2RHet 1623113 1623301 -1665460 + DM297_I LTR Gypsy 1331 1533 -4634 2 597 2682 77 58 26 chr2RHet 1623307 1623986 -1664775 + PROTOP_B DNA P 213 947 -206 2 597 2228 99 348 0 chr2RHet 1623993 1624492 -1664269 + DMRT1B LINE R1 1175 1848 -3335 2 597 1703 44 117 4 chr2RHet 1624485 1624734 -1664027 + PROTOP_B DNA P 876 1152 -1 2 597 697 125 0 0 chr2RHet 1624734 1624846 -1663915 + DMRT1B LINE R1 881 992 -4191 2 597 2286 157 72 0 chr2RHet 1624848 1625280 -1663481 + DMRT1B LINE R1 1677 2139 -3044 2 597 35 0 0 0 chr2RHet 1625296 1625331 -1663430 + AT_rich Low_complexity Low_complexity 1 35 0 2 597 4333 109 110 3 chr2RHet 1625735 1626471 -1662290 + DMRT1B LINE R1 2650 3464 -1719 2 597 5029 121 121 5 chr2RHet 1626466 1627703 -1661058 + DMRT1B LINE R1 3803 5183 0 2 597 1205 138 96 70 chr2RHet 1627726 1628038 -1660723 + DNAREP1_DM LINE Penelope 1 320 -274 2 597 475 121 231 0 chr2RHet 1628014 1628179 -1660582 + DNAREP1_DM LINE Penelope 136 320 -274 2 597 4338 108 112 3 chr2RHet 1628390 1629125 -1659636 + DMRT1B LINE R1 2650 3464 -1719 2 597 6798 120 121 5 chr2RHet 1629120 1630357 -1658404 + DMRT1B LINE R1 3803 5183 0 2 597 1285 132 61 71 chr2RHet 1630382 1630692 -1658069 + DNAREP1_DM LINE Penelope 1 307 -287 2 597 502 121 215 0 chr2RHet 1630723 1630896 -1657865 + DNAREP1_DM LINE Penelope 136 320 -274 2 597 300 125 109 0 chr2RHet 1631677 1631741 -1657020 + DNAREP1_DM LINE Penelope 261 331 -263 2 597 534 153 0 0 chr2RHet 1631746 1631844 -1656917 + DM297_I LTR Gypsy 4472 4569 -1598 2 597 346 125 161 12 chr2RHet 1632035 1632112 -1656649 + DM297_I LTR Gypsy 4565 4653 -1514 2 597 2714 9 0 3 chr2RHet 1632112 1632434 -1656327 + MAX_LTR LTR Pao 1 321 0 2 597 30205 4 8 15 chr2RHet 1632434 1636033 -1652728 + MAX_I LTR Pao 1 3572 -4342 2 597 12647 6 0 1 chr2RHet 1636027 1637520 -1651241 + MAX_I LTR Pao 6423 7914 0 2 597 2714 9 0 3 chr2RHet 1637520 1637842 -1650919 + MAX_LTR LTR Pao 1 321 0 2 597 771 150 318 51 chr2RHet 1637842 1638144 -1650617 + DM297_I LTR Gypsy 4649 5031 -1136 2 597 27 62 0 0 chr2RHet 1638318 1638366 -1650395 + AT_rich Low_complexity Low_complexity 1 48 0 2 597 566 329 144 9 chr2RHet 1638585 1638925 -1649836 - NOMAD_I LTR Gypsy -108 6464 6079 2 597 2174 149 48 18 chr2RHet 1640220 1640678 -1648083 + ZAM_LTR LTR Gypsy 1 472 0 2 597 247 230 79 10 chr2RHet 1640678 1640750 -1648011 + ZAM_LTR LTR Gypsy 394 472 0 2 597 1466 326 26 4 chr2RHet 1641702 1642515 -1646246 + Invader2_I LTR Gypsy 1854 2684 -1908 2 597 975 294 59 44 chr2RHet 1642690 1643505 -1645256 + Invader2_I LTR Gypsy 3674 4503 -483 2 597 342 162 19 9 chr2RHet 1643556 1643662 -1645099 + DM297_I LTR Gypsy 4500 4606 -1561 2 597 3656 191 21 3 chr2RHet 1643657 1644553 -1644208 - Gypsy10_I LTR Gypsy -1804 4484 3383 2 597 12719 99 16 25 chr2RHet 1644565 1646762 -1641999 - Gypsy10_I LTR Gypsy -2801 3487 1500 2 597 1928 54 114 0 chr2RHet 1646753 1647033 -1641728 - Gypsy10_LTR LTR Gypsy -52 312 1 2 597 40 21 0 0 chr2RHet 1647057 1647104 -1641657 + AT_rich Low_complexity Low_complexity 1 47 0 2 597 3916 60 26 0 chr2RHet 1649102 1649673 -1639088 + DM297_I LTR Gypsy 4396 4981 -1186 2 597 646 332 72 38 chr2RHet 1650579 1651863 -1636898 - HMSBEAGLE_I LTR Gypsy -1144 5385 3156 2 597 1785 292 19 11 chr2RHet 1651911 1652382 -1636379 - HMSBEAGLE_I LTR Gypsy -2622 3907 3436 2 597 261 0 0 0 chr2RHet 1652382 1652411 -1636350 + (CATTA)n Simple_repeat Simple_repeat 2 30 0 2 597 1785 292 19 11 chr2RHet 1652411 1652723 -1636038 - HMSBEAGLE_I LTR Gypsy -3094 3435 3120 2 597 384 332 22 48 chr2RHet 1652843 1653159 -1635602 - HMSBEAGLE_I LTR Gypsy -3576 2953 2646 2 597 1091 324 12 6 chr2RHet 1653321 1653824 -1634937 - HMSBEAGLE_I LTR Gypsy -4500 2029 1524 2 597 25 31 0 0 chr2RHet 1654037 1654069 -1634692 + AT_rich Low_complexity Low_complexity 1 32 0 2 597 30 77 0 0 chr2RHet 1654219 1654284 -1634477 + AT_rich Low_complexity Low_complexity 1 65 0 2 597 1276 37 21 0 chr2RHet 1654695 1654884 -1633877 + TLD2 Unknown Unknown 5 197 -21 2 597 409 286 22 103 chr2RHet 1654944 1655314 -1633447 + GTWIN_I LTR Gypsy 3167 3494 -2926 2 597 239 294 29 29 chr2RHet 1655903 1656078 -1632683 + GTWIN_I LTR Gypsy 4123 4297 -2124 2 597 24 32 0 0 chr2RHet 1656756 1656787 -1631974 + AT_rich Low_complexity Low_complexity 1 31 0 2 597 314 111 19 0 chr2RHet 1656891 1656945 -1631816 + DM297_I LTR Gypsy 3680 3734 -2433 2 597 389 133 386 29 chr2RHet 1656942 1657082 -1631679 + DM297_I LTR Gypsy 3950 4139 -2028 2 597 5519 105 87 0 chr2RHet 1657191 1659234 -1629527 + IVK_DM LINE I 3178 5398 -4 2 597 240 297 63 25 chr2RHet 1659483 1659642 -1629119 - ROO_I LTR Pao -693 7563 7399 2 597 651 271 101 4 chr2RHet 1659775 1660042 -1628719 - ROO_I LTR Pao -2159 6097 5805 2 597 226 183 16 16 chr2RHet 1660055 1660116 -1628645 - ROO_I LTR Pao -2537 5719 5659 2 597 372 325 0 0 chr2RHet 1660186 1660346 -1628415 - ROO_I LTR Pao -2780 5476 5317 2 597 436 68 0 0 chr2RHet 1660621 1660679 -1628082 - DMCR1A LINE CR1 -1 4469 4412 2 597 2911 52 37 9 chr2RHet 1660679 1661569 -1627192 - PROTOP_B DNA P 0 1153 301 2 597 6368 39 35 0 chr2RHet 1661568 1662386 -1626375 - DMCR1A LINE CR1 -709 3761 2915 2 597 9035 27 20 3 chr2RHet 1662406 1663532 -1625229 - DMCR1A LINE CR1 -3067 1403 258 2 597 727 57 0 9 chr2RHet 1663537 1663644 -1625117 - DMCR1A LINE CR1 -4364 106 1 2 597 25 31 0 0 chr2RHet 1663922 1663954 -1624807 + AT_rich Low_complexity Low_complexity 1 32 0 2 597 21 57 0 0 chr2RHet 1664237 1664272 -1624489 + AT_rich Low_complexity Low_complexity 1 35 0 2 597 13017 157 11 6 chr2RHet 1664478 1666830 -1621931 + Gypsy5_I LTR Gypsy 1913 4275 -2234 2 597 2522 157 86 4 chr2RHet 1666841 1667377 -1621384 + Gypsy5_I LTR Gypsy 4691 5270 -1239 2 597 35 0 0 0 chr2RHet 1667395 1667430 -1621331 + AT_rich Low_complexity Low_complexity 1 35 0 2 597 24 0 0 0 chr2RHet 1669244 1669268 -1619493 + AT_rich Low_complexity Low_complexity 1 24 0 2 597 776 335 45 45 chr2RHet 1670591 1671159 -1617602 - Gypsy4_I LTR Gypsy -2883 3538 2828 2 597 1525 19 19 0 chr2RHet 1671159 1671373 -1617388 - TLD2 Unknown Unknown 0 218 1 2 597 776 335 45 45 chr2RHet 1671373 1671829 -1616932 - Gypsy4_I LTR Gypsy -2883 2827 2255 2 597 367 320 36 40 chr2RHet 1673083 1673488 -1615273 - Gypsy4_I LTR Gypsy -5228 1784 1218 2 597 22 56 0 0 chr2RHet 1673831 1673867 -1614894 + AT_rich Low_complexity Low_complexity 1 36 0 2 597 40 21 0 0 chr2RHet 1674493 1674540 -1614221 + AT_rich Low_complexity Low_complexity 1 47 0 2 597 2618 150 60 52 chr2RHet 1674679 1675261 -1613500 + Gypsy5_I LTR Gypsy 5424 6010 -499 2 597 838 150 178 19 chr2RHet 1675323 1675649 -1613112 + QUASIMODO_LTR LTR Gypsy 212 589 -69 2 597 436 219 98 38 chr2RHet 1675817 1675950 -1612811 + NOMAD_I LTR Gypsy 1478 1618 -4954 2 597 733 316 26 19 chr2RHet 1676142 1676519 -1612242 + NOMAD_I LTR Gypsy 3396 3775 -2797 2 597 1023 65 184 23 chr2RHet 1677065 1677239 -1611522 - DMCR1A LINE CR1 0 4470 4269 2 597 3520 18 0 53 chr2RHet 1677238 1677707 -1611054 - DMCR1A LINE CR1 -353 4117 3674 2 597 1523 34 106 0 chr2RHet 1677705 1677913 -1610848 - DMCR1A LINE CR1 -916 3554 3325 2 597 1450 27 33 0 chr2RHet 1677915 1678098 -1610663 - DMCR1A LINE CR1 -1414 3056 2868 2 597 272 331 28 7 chr2RHet 1678890 1679033 -1609728 - OSVALDO_I LTR Gypsy -5984 669 524 2 597 766 177 13 0 chr2RHet 1679020 1679178 -1609583 - Invader3_I LTR Gypsy -3093 1795 1636 2 597 868 150 102 0 chr2RHet 1679173 1679340 -1609421 - Invader3_I LTR Gypsy -3712 1176 993 2 597 793 227 34 34 chr2RHet 1679332 1679565 -1609196 - Invader3_I LTR Gypsy -4637 251 19 2 597 5896 35 29 6 chr2RHet 1679570 1680375 -1608386 + PROTOP_B DNA P 1 819 -334 2 597 5554 19 0 0 chr2RHet 1680370 1681049 -1607712 + PROTOP DNA P 3802 4480 0 2 597 231 236 0 14 chr2RHet 1681109 1681182 -1607579 - Invader3_LTR LTR Gypsy -57 241 170 2 597 2640 73 28 15 chr2RHet 1681190 1681580 -1607181 + Gypsy6A_LTR LTR Gypsy 1 395 -25 2 597 2762 84 70 2 chr2RHet 1681684 1682114 -1606647 - ACCORD2_I LTR Gypsy -977 6235 5777 2 597 410 133 61 20 chr2RHet 1682124 1682334 -1606427 + PROTOP DNA P 541 803 -3677 2 597 1436 65 93 47 chr2RHet 1682335 1682592 -1606169 + PROTOP DNA P 3791 4059 -421 2 597 34 0 0 0 chr2RHet 1682622 1682656 -1606105 + AT_rich Low_complexity Low_complexity 1 34 0 2 597 9659 73 9 8 chr2RHet 1682656 1684101 -1604660 - I_DM LINE I -775 5456 4010 2 597 43045 11 11 0 chr2RHet 1684100 1689220 -1599541 - DMRT1A LINE R1 -6 5177 1 2 597 16198 63 18 7 chr2RHet 1689249 1691614 -1597147 - I_DM LINE I -2343 3888 1497 2 597 980 188 67 5 chr2RHet 1691618 1691842 -1596919 + S_DM DNA Tc1 367 604 -1132 2 597 29 0 0 0 chr2RHet 1691896 1691925 -1596836 + AT_rich Low_complexity Low_complexity 1 29 0 2 597 415 144 53 7 chr2RHet 1692017 1692154 -1596607 - Invader1_LTR LTR Gypsy 0 423 239 2 597 5130 46 133 9 chr2RHet 1692176 1693385 -1595376 + M4DM DNA Transib 2 1435 0 2 597 1037 131 31 53 chr2RHet 1693386 1693612 -1595149 - Invader1_LTR LTR Gypsy -202 221 1 2 597 250 261 0 0 chr2RHet 1693640 1693702 -1595059 + ROO_I LTR Pao 1722 1783 -6473 2 597 330 111 19 0 chr2RHet 1693702 1693756 -1595005 + DNAREP1_DM LINE Penelope 1 55 -539 2 597 292 56 52 18 chr2RHet 1693758 1693819 -1594942 + PROTOP_B DNA P 862 915 -238 2 597 1934 113 187 16 chr2RHet 1693803 1694237 -1594524 + FB4_DM DNA Tc1 1104 1611 -2478 2 597 1044 132 32 20 chr2RHet 1694237 1694532 -1594229 + FB4_DM DNA Tc1 2400 2759 -1330 2 597 1568 76 41 16 chr2RHet 1694525 1694767 -1593994 + PROTOP_B DNA P 905 1152 -1 2 597 1588 107 125 99 chr2RHet 1694776 1695151 -1593610 + DNAREP1_DM LINE Penelope 89 473 -121 2 597 371 239 42 42 chr2RHet 1695301 1695419 -1593342 + HMSBEAGLE_I LTR Gypsy 3116 3233 -3296 2 597 302 64 0 60 chr2RHet 1695443 1695493 -1593268 + Mariner2_DM DNA Tc1 2 48 -864 2 597 28 29 0 0 chr2RHet 1695679 1695714 -1593047 + AT_rich Low_complexity Low_complexity 1 35 0 2 597 45 62 0 0 chr2RHet 1695855 1695935 -1592826 + AT_rich Low_complexity Low_complexity 1 80 0 2 597 21 0 0 0 chr2RHet 1697130 1697151 -1591610 + AT_rich Low_complexity Low_complexity 1 21 0 2 597 2739 80 53 0 chr2RHet 1698789 1699188 -1589573 + Gypsy6A_LTR LTR Gypsy 1 420 0 2 597 26 82 0 0 chr2RHet 1699400 1699461 -1589300 + AT_rich Low_complexity Low_complexity 1 61 0 2 597 34 0 0 0 chr2RHet 1699484 1699518 -1589243 + AT_rich Low_complexity Low_complexity 1 34 0 2 597 795 279 272 0 chr2RHet 1700036 1700381 -1588380 + Gypsy3_I LTR Gypsy 1146 1584 -4593 2 597 1365 296 35 19 chr2RHet 1700486 1701052 -1587709 + Gypsy6_I LTR Gypsy 2218 2792 -4220 2 597 2247 253 40 25 chr2RHet 1701042 1701736 -1587025 + Gypsy3_I LTR Gypsy 2379 3083 -3094 2 597 795 279 272 0 chr2RHet 1702302 1702647 -1586114 + Gypsy6_I LTR Gypsy 1146 1584 -4593 2 74 5099 272 19 32 chr2RHet 1702731 1704878 -1583883 + Gypsy6_I LTR Gypsy 1928 4468 -2544 2 598 2835 305 92 17 chr2RHet 1704866 1706749 -1582012 + Gypsy6_I LTR Gypsy 4133 7010 -2 2 598 3038 77 7 0 chr2RHet 1706753 1707170 -1581591 + Gypsy6A_LTR LTR Gypsy 1 420 0 2 598 338 210 0 12 chr2RHet 1707177 1707259 -1581502 - Invader3_LTR LTR Gypsy -143 155 75 2 598 21 0 0 0 chr2RHet 1708278 1708299 -1580462 + AT_rich Low_complexity Low_complexity 1 21 0 2 598 267 61 0 0 chr2RHet 1708708 1708741 -1580020 + DMRT1B LINE R1 589 621 -4562 2 598 260 59 0 0 chr2RHet 1708741 1708775 -1579986 + DMRT1B LINE R1 734 767 -4416 2 598 782 60 15 0 chr2RHet 1708771 1708904 -1579857 + PROTOP_B DNA P 524 657 -496 2 598 1664 67 179 21 chr2RHet 1708884 1709175 -1579586 + PROTOP_B DNA P 816 1152 -1 2 598 697 125 0 0 chr2RHet 1709175 1709287 -1579474 + DMRT1B LINE R1 881 992 -4191 2 598 9912 131 67 1 chr2RHet 1709289 1710967 -1577794 + DMRT1B LINE R1 1677 3464 -1719 2 598 5146 120 122 3 chr2RHet 1710962 1712197 -1576564 + DMRT1B LINE R1 3803 5183 0 2 598 1679 121 35 68 chr2RHet 1712220 1712614 -1576147 + DNAREP1_DM LINE Penelope 1 316 -278 2 598 21 71 0 0 chr2RHet 1712828 1712870 -1575891 + AT_rich Low_complexity Low_complexity 1 42 0 2 598 1205 140 136 0 chr2RHet 1713367 1713624 -1575137 + DNAREP1_DM LINE Penelope 303 594 0 2 598 378 252 92 26 chr2RHet 1713870 1714104 -1574657 - BEL_I LTR Pao -89 5315 5035 2 598 1180 259 88 5 chr2RHet 1714132 1714531 -1574230 - BEL_I LTR Pao -769 4635 4204 2 598 399 255 18 18 chr2RHet 1714548 1714660 -1574101 - BEL_I LTR Pao -1314 4090 3979 2 598 1840 311 41 10 chr2RHet 1714714 1715587 -1573174 - BEL_I LTR Pao -2037 3367 2468 2 598 244 306 0 0 chr2RHet 1715604 1715676 -1573085 - BEL_I LTR Pao -3126 2278 2207 2 598 1047 211 0 0 chr2RHet 1715709 1715932 -1572829 - BEL_I LTR Pao -3673 1731 1509 2 598 246 318 0 0 chr2RHet 1716127 1716215 -1572546 - BEL_I LTR Pao -4515 889 802 2 598 2082 259 50 9 chr2RHet 1716260 1716942 -1571819 - BEL_I LTR Pao -4688 716 7 2 598 25 65 0 0 chr2RHet 1718014 1718060 -1570701 + AT_rich Low_complexity Low_complexity 1 46 0 2 598 4544 29 3 13 chr2RHet 1720301 1720896 -1567865 - PROTOP_A DNA P 0 1105 517 2 598 821 20 0 0 chr2RHet 1720889 1720987 -1567774 - PROTOP_A DNA P -1007 98 1 2 598 2002 190 116 4 chr2RHet 1721657 1722181 -1566580 + DNAREP1_DM LINE Penelope 12 594 0 2 598 2270 80 20 3 chr2RHet 1723252 1723555 -1565206 + Mariner2_DM DNA Tc1 1 308 -604 2 598 685 78 134 37 chr2RHet 1723554 1723688 -1565073 + Mariner2_DM DNA Tc1 766 912 0 2 598 31 0 0 0 chr2RHet 1724339 1724370 -1564391 + AT_rich Low_complexity Low_complexity 1 31 0 2 598 8192 35 27 0 chr2RHet 1724383 1725372 -1563389 - G5A_DM LINE Jockey 0 2841 1826 2 598 3253 70 55 17 chr2RHet 1726890 1727417 -1561344 - PROTOP_B DNA P -41 1112 566 2 598 266 320 56 44 chr2RHet 1727697 1727877 -1560884 + IDEFIX_I LTR Gypsy 1599 1780 -3848 2 598 330 219 78 46 chr2RHet 1728075 1728228 -1560533 + DM297_I LTR Gypsy 4306 4463 -1704 2 598 2748 151 65 17 chr2RHet 1729227 1729753 -1559008 - DNAREP1_DM LINE Penelope -2 592 42 2 598 28 29 0 0 chr2RHet 1730050 1730085 -1558676 + AT_rich Low_complexity Low_complexity 1 35 0 2 598 1719 5 0 5 chr2RHet 1730121 1730320 -1558441 + Copia2_LTR_DM LTR Copia 1 198 0 2 598 2764 13 0 0 chr2RHet 1730320 1730637 -1558124 + Copia2_I LTR Copia 1 317 -3845 2 598 4758 7 41 5 chr2RHet 1730648 1731213 -1557548 + Copia2_I LTR Copia 435 1019 -3143 2 598 9013 11 0 0 chr2RHet 1731195 1732195 -1556566 + Copia2_I LTR Copia 2661 3660 -502 2 598 1029 8 0 0 chr2RHet 1732192 1732317 -1556444 + Copia2_I LTR Copia 4038 4162 0 2 598 1770 0 0 0 chr2RHet 1732317 1732515 -1556246 + Copia2_LTR_DM LTR Copia 1 198 0 2 598 21 0 0 0 chr2RHet 1732520 1732541 -1556220 + AT_rich Low_complexity Low_complexity 1 21 0 2 598 278 146 0 0 chr2RHet 1732623 1732671 -1556090 - DNAREP1_DM LINE Penelope -189 405 358 2 598 813 216 42 2 chr2RHet 1733095 1733317 -1555444 + TV1I LTR Gypsy 2125 2553 -3559 2 598 549 97 57 28 chr2RHet 1733314 1733420 -1555341 + DNAREP1_DM LINE Penelope 223 331 -263 2 598 527 150 14 70 chr2RHet 1733405 1733548 -1555213 + DNAREP1_DM LINE Penelope 151 285 -309 2 598 256 0 0 0 chr2RHet 1733566 1733594 -1555167 + DNAREP1_DM LINE Penelope 409 436 -158 2 598 258 303 10 0 chr2RHet 1733599 1733698 -1555063 + QUASIMODO_I LTR Gypsy 2540 2639 -3421 2 598 312 247 0 0 chr2RHet 1733877 1733966 -1554795 + IDEFIX_I LTR Gypsy 2721 2809 -2819 2 598 956 173 33 36 chr2RHet 1734146 1734398 -1554363 - DNAREP1_DM LINE Penelope -266 328 86 2 598 27 29 0 0 chr2RHet 1734884 1734918 -1553843 + AT_rich Low_complexity Low_complexity 1 34 0 2 598 569 181 215 0 chr2RHet 1735051 1735195 -1553566 - DNAREP1_DM LINE Penelope -102 492 318 2 598 499 211 18 0 chr2RHet 1735218 1735327 -1553434 - DNAREP1_DM LINE Penelope -482 112 2 2 598 26 50 0 0 chr2RHet 1735327 1735367 -1553394 + AT_rich Low_complexity Low_complexity 1 40 0 2 598 3517 32 41 0 chr2RHet 1735709 1736144 -1552617 + S2_DM DNA Tc1 868 1320 -415 2 598 2241 34 7 0 chr2RHet 1736143 1736440 -1552321 + S2_DM DNA Tc1 1437 1735 0 2 598 450 151 6 15 chr2RHet 1737793 1737905 -1550856 + DNAREP1_DM LINE Penelope 244 406 -188 2 598 395 200 28 57 chr2RHet 1738182 1738288 -1550473 - DNAREP1_DM LINE Penelope -488 106 4 2 598 26 0 0 0 chr2RHet 1738870 1738896 -1549865 + AT_rich Low_complexity Low_complexity 1 26 0 2 598 417 222 120 0 chr2RHet 1738963 1739080 -1549681 + DNAREP1_DM LINE Penelope 463 593 -1 2 598 24 0 0 0 chr2RHet 1739172 1739196 -1549565 + AT_rich Low_complexity Low_complexity 1 24 0 2 598 25 75 0 0 chr2RHet 1739385 1739438 -1549323 + AT_rich Low_complexity Low_complexity 1 53 0 2 598 40 37 0 0 chr2RHet 1740150 1740204 -1548557 + AT_rich Low_complexity Low_complexity 1 54 0 2 598 1320 80 415 0 chr2RHet 1740482 1740754 -1548007 + DNAREP1_DM LINE Penelope 185 569 -25 2 598 267 186 0 0 chr2RHet 1740761 1740820 -1547941 - PROTOP DNA P -274 4206 4148 2 598 552 143 26 18 chr2RHet 1740838 1740952 -1547809 - PROTOP DNA P -3457 1023 909 2 598 817 95 5 9 chr2RHet 1740927 1741109 -1547652 - PROTOP DNA P -3767 713 530 2 598 1511 145 221 42 chr2RHet 1741092 1741518 -1547243 - PROTOP_B DNA P -654 499 1 2 598 30 45 0 0 chr2RHet 1741858 1741902 -1546859 + AT_rich Low_complexity Low_complexity 1 44 0 2 598 22 0 0 0 chr2RHet 1742202 1742224 -1546537 + AT_rich Low_complexity Low_complexity 1 22 0 2 598 186 43 0 0 chr2RHet 1742879 1742902 -1545859 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 2 598 31 68 0 0 chr2RHet 1742992 1743051 -1545710 + AT_rich Low_complexity Low_complexity 1 59 0 2 598 1737 150 39 75 chr2RHet 1743114 1743594 -1545167 + DNAREP1_DM LINE Penelope 1 592 -2 2 598 25 51 0 0 chr2RHet 1744357 1744396 -1544365 + AT_rich Low_complexity Low_complexity 1 39 0 2 598 384 335 57 0 chr2RHet 1744993 1745241 -1543520 - HMSBEAGLE_I LTR Gypsy -916 5613 5352 2 598 789 312 36 38 chr2RHet 1745334 1745781 -1542980 - HMSBEAGLE_I LTR Gypsy -1801 4728 4283 2 598 949 333 90 4 chr2RHet 1746195 1746671 -1542090 - HMSBEAGLE_I LTR Gypsy -2293 4236 3720 2 598 404 173 86 0 chr2RHet 1747339 1747420 -1541341 - Gypsy6A_LTR LTR Gypsy -214 206 119 2 598 2954 293 130 15 chr2RHet 1747406 1748946 -1539815 - Gypsy6_I LTR Gypsy -37 6975 4463 2 598 4593 269 25 86 chr2RHet 1748947 1750770 -1537991 - Gypsy3_I LTR Gypsy -2539 3638 1928 2 598 883 282 272 0 chr2RHet 1750854 1751199 -1537562 - Gypsy3_I LTR Gypsy -4593 1584 1146 2 598 26 0 0 0 chr2RHet 1751392 1751418 -1537343 + AT_rich Low_complexity Low_complexity 1 26 0 2 598 26 74 0 0 chr2RHet 1751515 1751569 -1537192 + AT_rich Low_complexity Low_complexity 1 54 0 2 598 3060 80 8 0 chr2RHet 1751780 1752180 -1536581 - Gypsy6A_LTR LTR Gypsy 0 420 18 2 598 2770 34 0 0 chr2RHet 1752551 1752879 -1535882 - DM1731_LTR LTR Copia 0 336 9 2 598 21 0 0 0 chr2RHet 1753465 1753486 -1535275 + AT_rich Low_complexity Low_complexity 1 21 0 2 598 9150 20 15 0 chr2RHet 1754134 1755223 -1533538 + PROTOP_A DNA P 1 1105 0 2 598 21 0 0 0 chr2RHet 1755289 1755310 -1533451 + AT_rich Low_complexity Low_complexity 1 21 0 2 598 37 52 0 0 chr2RHet 1755649 1755707 -1533054 + AT_rich Low_complexity Low_complexity 1 58 0 2 598 942 131 173 27 chr2RHet 1755811 1756031 -1532730 + DMRT1C LINE R1 4720 4971 -472 2 598 9926 62 30 16 chr2RHet 1756049 1757426 -1531335 + DMCR1A LINE CR1 7 1403 -3067 2 598 7763 38 21 30 chr2RHet 1757446 1758449 -1530312 + DMCR1A LINE CR1 2915 3908 -562 2 598 3343 48 1 14 chr2RHet 1758449 1758888 -1529873 + STALKER4_LTR LTR Gypsy 1 399 -3 2 598 28 48 0 0 chr2RHet 1758976 1759018 -1529743 + AT_rich Low_complexity Low_complexity 1 42 0 2 598 30980 34 21 6 chr2RHet 1759025 1763079 -1525682 + STALKER4_I LTR Gypsy 291 4473 -2057 2 598 14041 163 45 6 chr2RHet 1763081 1765784 -1522977 - Gypsy5_I LTR Gypsy -1788 4721 1913 2 598 41 21 0 0 chr2RHet 1765990 1766038 -1522723 + AT_rich Low_complexity Low_complexity 1 48 0 2 598 25 31 0 0 chr2RHet 1766321 1766353 -1522408 + AT_rich Low_complexity Low_complexity 1 32 0 2 598 835 28 0 9 chr2RHet 1766631 1766738 -1522023 + DMCR1A LINE CR1 1 106 -4364 2 598 9366 32 20 3 chr2RHet 1766743 1767869 -1520892 + DMCR1A LINE CR1 258 1403 -3067 2 598 6697 47 20 0 chr2RHet 1767889 1768719 -1520042 + DMCR1A LINE CR1 2915 3761 -709 2 598 2937 41 0 0 chr2RHet 1768716 1769109 -1519652 + PROTOP DNA P 301 693 -3787 2 598 1148 14 0 0 chr2RHet 1769114 1769254 -1519507 + PROTOP_A DNA P 662 801 -304 2 598 1849 38 4 28 chr2RHet 1769324 1769571 -1519190 + BATUMI_LTR LTR Pao 32 272 0 2 598 4526 58 41 15 chr2RHet 1769571 1770240 -1518521 + BATUMI_I LTR Pao 1 687 -7276 2 598 4801 10 35 2 chr2RHet 1770240 1770815 -1517946 + IDEFIX_LTR LTR Gypsy 1 594 0 2 598 25 0 0 0 chr2RHet 1771005 1771030 -1517731 + AT_rich Low_complexity Low_complexity 1 25 0 2 598 48304 10 0 1 chr2RHet 1771447 1777082 -1511679 + IDEFIX_I LTR Gypsy 1 5628 0 2 598 4783 10 35 2 chr2RHet 1777082 1777657 -1511104 + IDEFIX_LTR LTR Gypsy 1 594 0 2 598 12307 49 31 40 chr2RHet 1777666 1779435 -1509326 + BATUMI_I LTR Pao 538 2290 -5673 2 598 2282 264 25 16 chr2RHet 1779497 1780231 -1508530 - FROGGER_I LTR Copia -86 1991 1252 2 598 1140 322 36 37 chr2RHet 1789446 1790184 -1498577 - Copia2_I LTR Copia -1948 2214 1386 2 598 363 346 37 58 chr2RHet 1790924 1791444 -1497317 - Copia2_I LTR Copia -3482 680 146 2 598 579 15 0 0 chr2RHet 1791821 1791889 -1496872 + (TTA)n Simple_repeat Simple_repeat 3 70 0 2 598 218 196 0 0 chr2RHet 1791889 1791991 -1496770 + (TA)n Simple_repeat Simple_repeat 1 102 0 2 598 255 258 0 0 chr2RHet 1792094 1792156 -1496605 - Transib5 DNA Transib -1646 1355 1294 2 598 473 323 30 43 chr2RHet 1792919 1793242 -1495519 + Gypsy5_I LTR Gypsy 2359 2635 -3874 2 598 1172 184 35 42 chr2RHet 1793757 1794053 -1494708 - Gypsy5_LTR LTR Gypsy -141 289 10 2 598 12546 168 53 8 chr2RHet 1794060 1798454 -1490307 - Gypsy5_I LTR Gypsy -4 6505 1913 2 598 41 21 0 0 chr2RHet 1798660 1798708 -1490053 + AT_rich Low_complexity Low_complexity 1 48 0 2 598 829 28 0 19 chr2RHet 1799300 1799408 -1489353 + DMCR1A LINE CR1 1 106 -4364 2 598 9225 36 23 3 chr2RHet 1799413 1800536 -1488225 + DMCR1A LINE CR1 258 1403 -3067 2 598 9739 30 17 20 chr2RHet 1800556 1801762 -1486999 + DMCR1A LINE CR1 2915 4117 -353 2 598 1067 71 184 23 chr2RHet 1801761 1801935 -1486826 + DMCR1A LINE CR1 4269 4470 0 2 598 722 305 57 11 chr2RHet 1802473 1802841 -1485920 - NOMAD_I LTR Gypsy -2792 3780 3396 2 598 566 268 94 30 chr2RHet 1802940 1803175 -1485586 - NOMAD_I LTR Gypsy -4853 1719 1470 2 598 1433 167 141 29 chr2RHet 1803606 1803982 -1484779 - QUASIMODO_LTR LTR Gypsy -29 629 212 2 598 21 0 0 0 chr2RHet 1804140 1804161 -1484600 + AT_rich Low_complexity Low_complexity 1 21 0 2 598 335 307 40 38 chr2RHet 1804500 1805041 -1483720 + MICROPIA_I LTR Gypsy 144 734 -1679 2 598 1469 329 40 24 chr2RHet 1805183 1806169 -1482592 + MICROPIA_I LTR Gypsy 943 1943 -2156 2 598 42949 3 0 0 chr2RHet 1806173 1810884 -1477877 + BS2 LINE Jockey 11 4721 0 2 598 207 0 0 0 chr2RHet 1810890 1810913 -1477848 + (A)n Simple_repeat Simple_repeat 1 23 0 2 598 2535 331 35 18 chr2RHet 1810920 1812885 -1475876 + MICROPIA_I LTR Gypsy 1934 3874 -602 2 598 1125 84 0 0 chr2RHet 1813435 1813613 -1475148 + S_DM DNA Tc1 1559 1736 0 2 598 22 0 0 0 chr2RHet 1814624 1814646 -1474115 + AT_rich Low_complexity Low_complexity 1 22 0 2 598 1180 129 9 50 chr2RHet 1815374 1815594 -1473167 - QUASIMODO_LTR LTR Gypsy -447 211 1 2 598 11598 16 0 1 chr2RHet 1816197 1817528 -1471233 - FW_DM LINE Jockey 0 4692 3363 2 598 1433 12 0 0 chr2RHet 1817529 1817694 -1471067 - FW_DM LINE Jockey -1507 3185 3021 2 598 17763 21 21 0 chr2RHet 1817710 1819802 -1468959 - FW_DM LINE Jockey -2538 2154 18 2 598 234 139 49 37 chr2RHet 1819856 1819938 -1468823 + (TTAA)n Simple_repeat Simple_repeat 1 83 0 2 598 224 30 30 0 chr2RHet 1820407 1820440 -1468321 + (TTAA)n Simple_repeat Simple_repeat 4 37 0 2 598 1191 55 0 139 chr2RHet 1820779 1820988 -1467773 - QUASIMODO_LTR LTR Gypsy 0 658 479 2 598 660 23 35 0 chr2RHet 1820975 1821061 -1467700 - QUASIMODO_I LTR Gypsy -1079 4981 4893 2 598 16618 68 0 4 chr2RHet 1821049 1823315 -1465446 - I_DM LINE I -751 5480 3225 2 598 13157 59 10 9 chr2RHet 1823314 1825160 -1463601 - I_DM LINE I -4295 1936 88 2 598 8566 46 16 28 chr2RHet 1825147 1826351 -1462410 - QUASIMODO_I LTR Gypsy -1153 4907 3719 2 598 29711 8 1 5 chr2RHet 1826372 1829804 -1458957 - QUASIMODO_I LTR Gypsy -2643 3417 1 2 598 5878 3 1 0 chr2RHet 1829804 1830461 -1458300 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 598 29889 9 28 0 chr2RHet 1830461 1834695 -1454066 - QUASIMODO_I LTR Gypsy 0 6060 1705 2 74 362 345 95 7 chr2RHet 1834945 1835240 -1453521 - BLASTOPIA_I LTR Gypsy -1 4480 4160 2 599 230 278 44 44 chr2RHet 1835910 1836023 -1452738 - BLASTOPIA_I LTR Gypsy -2057 2424 2312 2 599 2565 24 0 0 chr2RHet 1836143 1836430 -1452331 - Gypsy4_LTR LTR Gypsy 0 287 1 2 599 37097 8 23 0 chr2RHet 1836430 1842577 -1446184 - Gypsy4_I LTR Gypsy 0 6288 1 2 599 2600 17 0 0 chr2RHet 1842577 1842864 -1445897 - Gypsy4_LTR LTR Gypsy 0 287 1 2 599 1174 8 0 0 chr2RHet 1845043 1845176 -1443585 - QUASIMODO_I LTR Gypsy -4361 1699 1567 2 599 6546 101 48 52 chr2RHet 1845177 1846334 -1442427 - PROTOP_B DNA P 0 1153 1 2 599 13660 24 1 1 chr2RHet 1846334 1847905 -1440856 - QUASIMODO_I LTR Gypsy -4488 1572 1 2 599 2551 102 26 52 chr2RHet 1847905 1848360 -1440401 - QUASIMODO_LTR LTR Gypsy 0 658 63 2 599 1119 208 4 36 chr2RHet 1848705 1848980 -1439781 + DNAREP1_DM LINE Penelope 18 283 -311 2 599 26 30 0 0 chr2RHet 1849112 1849145 -1439616 + AT_rich Low_complexity Low_complexity 1 33 0 2 599 251 56 74 0 chr2RHet 1849397 1849451 -1439310 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 599 22 56 0 0 chr2RHet 1849499 1849535 -1439226 + AT_rich Low_complexity Low_complexity 1 36 0 2 599 1391 101 72 0 chr2RHet 1850326 1850533 -1438228 - DNAREP1_DM LINE Penelope 0 594 373 2 599 1542 128 75 14 chr2RHet 1850549 1850841 -1437920 - DNAREP1_DM LINE Penelope -278 316 7 2 599 558 209 58 46 chr2RHet 1850809 1851133 -1437628 + DNAREP1_DM LINE Penelope 18 293 -301 2 599 21 0 0 0 chr2RHet 1851133 1851154 -1437607 + AT_rich Low_complexity Low_complexity 1 21 0 2 599 255 81 0 0 chr2RHet 1851831 1851868 -1436893 - Gypsy8_I LTR Gypsy -4310 37 1 2 599 774 194 6 102 chr2RHet 1851846 1852108 -1436653 - Gypsy8_LTR LTR Gypsy 0 304 1 2 599 680 98 0 0 chr2RHet 1852196 1852288 -1436473 + DNAREP1_DM LINE Penelope 1 92 -502 2 599 2579 88 219 0 chr2RHet 1852298 1852748 -1436013 - R1_DM LINE R1 -3069 2287 1740 2 599 394 113 42 0 chr2RHet 1852748 1852819 -1435942 - R1_DM LINE R1 -4719 637 564 2 599 291 239 75 11 chr2RHet 1852836 1852929 -1435832 - R1_DM LINE R1 -12 5344 5246 2 599 242 125 250 0 chr2RHet 1853055 1853103 -1435658 + DNAREP1_DM LINE Penelope 154 213 -381 2 599 688 46 23 0 chr2RHet 1853163 1853250 -1435511 + DNAREP1_DM LINE Penelope 1 89 -505 2 599 420 132 220 0 chr2RHet 1853260 1853351 -1435410 + DNAREP1_DM LINE Penelope 297 407 -187 2 599 289 57 0 0 chr2RHet 1853351 1853386 -1435375 + Mariner2_DM DNA Tc1 1 35 -877 2 599 3436 58 41 2 chr2RHet 1853398 1853833 -1434928 - Mariner2_DM DNA Tc1 -303 609 158 2 599 548 179 0 0 chr2RHet 1853892 1853987 -1434774 - STALKER4_LTR LTR Gypsy -32 370 276 2 599 645 119 9 0 chr2RHet 1853993 1854102 -1434659 + S_DM DNA Tc1 1621 1730 -6 2 599 229 159 68 0 chr2RHet 1854102 1854146 -1434615 - Stalker2_LTR LTR Gypsy -160 264 218 2 599 890 86 0 30 chr2RHet 1854151 1854283 -1434478 - Mariner2_DM DNA Tc1 -784 128 1 2 599 460 81 784 26 chr2RHet 1854284 1854401 -1434360 - Invader5_I LTR Gypsy -3127 207 1 2 599 2789 53 0 3 chr2RHet 1854401 1854742 -1434019 - Invader5_LTR LTR Gypsy 0 352 13 2 599 647 241 28 11 chr2RHet 1854774 1854950 -1433811 - DMCR1A LINE CR1 -3183 1287 1109 2 599 647 242 74 6 chr2RHet 1855081 1855243 -1433518 - DMCR1A LINE CR1 -3648 822 650 2 599 479 293 45 58 chr2RHet 1855214 1855457 -1433304 - DMCR1A LINE CR1 -3926 544 305 2 599 1407 162 26 4 chr2RHet 1855510 1855782 -1432979 + DNAREP1_DM LINE Penelope 1 278 -316 2 599 829 152 89 25 chr2RHet 1855782 1855988 -1432773 + DNAREP1_DM LINE Penelope 117 332 -262 2 599 2454 148 56 26 chr2RHet 1855993 1856458 -1432303 + DNAREP1_DM LINE Penelope 88 566 -28 2 599 21 0 0 0 chr2RHet 1856461 1856482 -1432279 + AT_rich Low_complexity Low_complexity 1 21 0 2 599 7122 18 64 0 chr2RHet 1856573 1857611 -1431150 + PROTOP_A DNA P 1 1105 0 2 599 16364 30 2 1 chr2RHet 1857611 1859482 -1429279 + G5_DM LINE Jockey 210 2081 -2775 2 599 9991 34 66 1 chr2RHet 1859493 1861462 -1427299 + G5_DM LINE Jockey 2761 4856 0 2 599 368 207 35 35 chr2RHet 1861699 1861784 -1426977 - DNAREP1_DM LINE Penelope -208 386 302 2 599 280 259 93 26 chr2RHet 1861771 1861922 -1426839 - DNAREP1_DM LINE Penelope -419 175 15 2 599 2250 159 11 0 chr2RHet 1862197 1862561 -1426200 - NOMAD_I LTR Gypsy -1136 5436 5069 2 599 2126 26 11 7 chr2RHet 1862559 1862830 -1425931 - BATUMI_I LTR Pao -1265 6698 6427 2 599 5701 15 0 5 chr2RHet 1862853 1863517 -1425244 + BATUMI_I LTR Pao 7303 7963 0 2 599 2321 24 0 30 chr2RHet 1863517 1863809 -1424952 + BATUMI_I LTR Pao 7002 7284 -679 2 599 3494 104 100 38 chr2RHet 1863808 1864526 -1424235 - BATUMI_I LTR Pao -7200 763 1 2 599 2344 121 212 6 chr2RHet 1864527 1865167 -1423594 - NOMAD_I LTR Gypsy -1865 4707 3936 2 599 4067 108 12 17 chr2RHet 1865167 1865752 -1423009 - NOMAD_I LTR Gypsy -2830 3742 3161 2 599 5690 154 41 29 chr2RHet 1865751 1866784 -1421977 - NOMAD_I LTR Gypsy -4117 2455 1411 2 599 10829 42 43 2 chr2RHet 1866781 1868106 -1420655 + DMCR1A LINE CR1 1420 2798 -1672 2 599 2337 50 3 51 chr2RHet 1868105 1868421 -1420340 + DMCR1A LINE CR1 3702 4002 -468 2 599 1723 95 256 9 chr2RHet 1868417 1868745 -1420016 - NOMAD_I LTR Gypsy -5821 751 343 2 599 30775 7 0 1 chr2RHet 1868754 1872142 -1416619 - DOC LINE Jockey 0 4725 1340 2 599 355 168 44 125 chr2RHet 1872131 1872267 -1416494 - NOMAD_I LTR Gypsy -6444 128 4 2 599 26 30 0 0 chr2RHet 1872807 1872840 -1415921 + AT_rich Low_complexity Low_complexity 1 33 0 2 599 26 50 0 0 chr2RHet 1874366 1874406 -1414355 + AT_rich Low_complexity Low_complexity 1 40 0 2 599 257 292 0 0 chr2RHet 1875264 1875370 -1413391 - TOM_I LTR Gypsy -363 5749 5644 2 599 890 285 35 4 chr2RHet 1875370 1875627 -1413134 + G_DM LINE Jockey 914 1178 -3168 2 599 388 122 0 0 chr2RHet 1875634 1875706 -1413055 + G2_DM LINE Jockey 185 237 -2865 2 599 1580 241 81 5 chr2RHet 1875713 1876202 -1412559 + G_DM LINE Jockey 1658 2112 -2234 2 599 803 266 39 16 chr2RHet 1876255 1876511 -1412250 + G_DM LINE Jockey 1317 1578 -1524 2 599 490 220 50 25 chr2RHet 1876549 1876670 -1412091 + LINEJ1_DM LINE Jockey 2661 2784 -2236 2 599 2080 94 45 3 chr2RHet 1876670 1876978 -1411783 - MAX_LTR LTR Pao 0 321 1 2 599 2425 179 59 8 chr2RHet 1876978 1877440 -1411321 + LINEJ1_DM LINE Jockey 2775 3260 -1760 2 599 759 240 119 13 chr2RHet 1877453 1877689 -1411072 + LINEJ1_DM LINE Jockey 3330 3590 -1430 2 599 1444 184 93 0 chr2RHet 1877727 1878005 -1410756 + LINEJ1_DM LINE Jockey 3683 3986 -1034 2 599 872 189 104 16 chr2RHet 1878002 1878195 -1410566 + LINEJ1_DM LINE Jockey 4220 4429 -591 2 599 8475 53 23 5 chr2RHet 1878202 1879286 -1409475 - FW2_DM LINE Jockey 0 3961 2625 2 599 1514 69 59 0 chr2RHet 1879284 1879487 -1409274 - FW2_DM LINE Jockey -1212 2749 2535 2 599 1526 229 155 10 chr2RHet 1879539 1880021 -1408740 + LINEJ1_DM LINE Jockey 4434 4985 -35 2 599 762 117 283 0 chr2RHet 1880024 1880169 -1408592 + DNAREP1_DM LINE Penelope 393 578 -16 2 599 495 51 0 0 chr2RHet 1880179 1880238 -1408523 + DNAREP1_DM LINE Penelope 536 594 0 2 599 1808 88 28 4 chr2RHet 1881060 1881311 -1407450 + Gypsy6A_LTR LTR Gypsy 164 420 0 2 599 182 91 0 29 chr2RHet 1881331 1881365 -1407396 + (CCA)n Simple_repeat Simple_repeat 2 34 0 2 599 25 31 0 0 chr2RHet 1881521 1881553 -1407208 + AT_rich Low_complexity Low_complexity 1 32 0 2 599 13426 25 14 0 chr2RHet 1881585 1883142 -1405619 + G2_DM LINE Jockey 1523 3100 -2 2 599 43 103 0 0 chr2RHet 1883144 1883299 -1405462 + AT_rich Low_complexity Low_complexity 1 155 0 2 599 722 318 70 19 chr2RHet 1883542 1883901 -1404860 + Gypsy6_I LTR Gypsy 1005 1381 -5631 2 599 354 83 0 0 chr2RHet 1883928 1883976 -1404785 - BS2 LINE Jockey 0 4721 4674 2 599 765 128 0 0 chr2RHet 1883982 1884091 -1404670 - BS2 LINE Jockey -248 4473 4365 2 599 1081 269 11 5 chr2RHet 1884096 1884416 -1404345 + Gypsy6_I LTR Gypsy 1715 1985 -4150 2 599 3286 267 22 16 chr2RHet 1884427 1885377 -1403384 + Gypsy6_I LTR Gypsy 2437 3880 -3132 2 599 1884 104 16 60 chr2RHet 1885422 1885738 -1403023 - Gypsy6A_LTR LTR Gypsy -118 302 1 2 599 1957 267 41 0 chr2RHet 1885758 1886249 -1402512 + Gypsy6_I LTR Gypsy 3918 4428 -2584 2 599 462 209 0 0 chr2RHet 1886264 1886355 -1402406 + Gypsy6_I LTR Gypsy 4338 4428 -2584 2 599 432 189 0 0 chr2RHet 1886368 1886442 -1402319 + Gypsy6_I LTR Gypsy 4336 4409 -2603 2 599 409 176 0 0 chr2RHet 1886446 1886514 -1402247 + Gypsy6_I LTR Gypsy 5246 5313 -1699 2 599 587 331 49 0 chr2RHet 1886533 1886778 -1401983 + Gypsy6_I LTR Gypsy 5804 6060 -952 2 599 951 286 57 20 chr2RHet 1886797 1887097 -1401664 + Gypsy6_I LTR Gypsy 6702 7012 0 2 599 3257 50 0 24 chr2RHet 1887099 1887509 -1401252 + Gypsy6A_LTR LTR Gypsy 1 400 -20 2 599 2203 100 94 14 chr2RHet 1888262 1888911 -1399850 + DNAREP1_DM LINE Penelope 8 594 0 2 599 681 93 188 30 chr2RHet 1889467 1889600 -1399161 + DNAREP1_DM LINE Penelope 441 594 0 2 599 620 114 35 0 chr2RHet 1891703 1891817 -1396944 - DNAREP1_DM LINE Penelope 0 594 502 2 599 788 139 82 6 chr2RHet 1891845 1892004 -1396757 - DNAREP1_DM LINE Penelope -258 336 166 2 599 7404 108 80 2 chr2RHet 1891994 1893212 -1395549 - NINJA_I LTR Pao -834 5177 3865 2 599 4399 102 0 0 chr2RHet 1893201 1893845 -1394916 - NINJA_I LTR Pao -2721 3290 2647 2 599 508 181 11 0 chr2RHet 1893865 1893959 -1394802 - NINJA_I LTR Pao -3606 2405 2311 2 599 1568 112 0 0 chr2RHet 1893982 1894224 -1394537 - NINJA_I LTR Pao -5048 963 722 2 599 1469 122 149 30 chr2RHet 1894426 1894796 -1393965 - DM297_LTR LTR Gypsy 0 414 1 2 599 1700 44 23 39 chr2RHet 1894796 1895056 -1393705 - DM297_I LTR Gypsy 0 6167 5912 2 599 884 122 19 0 chr2RHet 1895151 1895307 -1393454 - DM297_I LTR Gypsy -652 5515 5357 2 599 6919 95 52 6 chr2RHet 1895307 1896738 -1392023 - DM297_I LTR Gypsy -2477 3690 2113 2 599 4907 81 5 7 chr2RHet 1896725 1897480 -1391281 - DM297_I LTR Gypsy -4178 1989 1236 2 599 3818 78 27 0 chr2RHet 1897477 1898039 -1390722 - DM297_I LTR Gypsy -5133 1034 458 2 599 1668 60 22 18 chr2RHet 1898037 1898310 -1390451 - DM297_I LTR Gypsy -5893 274 1 2 599 1793 105 77 87 chr2RHet 1898310 1898726 -1390035 - DM297_LTR LTR Gypsy 0 414 3 2 599 675 235 12 62 chr2RHet 1899142 1899401 -1389360 - IDEFIX_LTR LTR Gypsy -101 493 248 2 599 331 65 0 0 chr2RHet 1899548 1899594 -1389167 - IDEFIX_LTR LTR Gypsy -548 46 1 2 599 231 61 0 0 chr2RHet 1899927 1899960 -1388801 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 2 599 1229 101 6 0 chr2RHet 1899990 1900168 -1388593 + Jockey2 LINE Jockey 66 244 -3184 2 599 285 186 11 34 chr2RHet 1900164 1900253 -1388508 + Jockey2 LINE Jockey 1325 1411 -2017 2 599 417 116 0 0 chr2RHet 1900356 1900425 -1388336 + Jockey2 LINE Jockey 249 317 -3111 2 599 3106 82 189 3 chr2RHet 1900485 1901092 -1387669 + Jockey2 LINE Jockey 308 1027 -2401 2 599 1240 83 31 18 chr2RHet 1901092 1901314 -1387447 + Jockey2 LINE Jockey 3185 3409 -19 2 599 452 111 0 14 chr2RHet 1902345 1902418 -1386343 - DNAREP1_DM LINE Penelope -498 96 25 2 599 365 149 14 0 chr2RHet 1902413 1902487 -1386274 - DNAREP1_DM LINE Penelope -372 222 148 2 599 957 154 9 69 chr2RHet 1902469 1902685 -1386076 - DNAREP1_DM LINE Penelope -391 203 1 2 599 1525 16 43 0 chr2RHet 1903177 1903363 -1385398 - PROTOP DNA P 0 4480 4287 2 599 27 0 0 0 chr2RHet 1903512 1903539 -1385222 + AT_rich Low_complexity Low_complexity 1 27 0 2 599 25 0 0 0 chr2RHet 1903929 1903954 -1384807 + AT_rich Low_complexity Low_complexity 1 25 0 2 599 1077 169 68 0 chr2RHet 1903956 1904193 -1384568 - FW_DM LINE Jockey -8 4684 4432 2 599 1546 109 294 4 chr2RHet 1904192 1904471 -1384290 - FW_DM LINE Jockey -2501 2191 1832 2 599 1262 143 339 20 chr2RHet 1904469 1905003 -1383758 - FW_DM LINE Jockey -3360 1332 628 2 599 27 0 0 0 chr2RHet 1905021 1905048 -1383713 + AT_rich Low_complexity Low_complexity 1 27 0 2 599 1859 139 194 52 chr2RHet 1905313 1905817 -1382944 + DNAREP1_DM LINE Penelope 19 594 0 2 599 25 0 0 0 chr2RHet 1906175 1906200 -1382561 + AT_rich Low_complexity Low_complexity 1 25 0 2 599 45 19 0 0 chr2RHet 1906630 1906682 -1382079 + AT_rich Low_complexity Low_complexity 1 52 0 2 599 676 93 59 8 chr2RHet 1906890 1907009 -1381752 - DM297_LTR LTR Gypsy -11 403 279 2 599 381 145 14 0 chr2RHet 1907475 1907544 -1381217 - S_DM DNA Tc1 -398 1338 1269 2 599 1647 16 345 0 chr2RHet 1907543 1907792 -1380969 - Baggins1 LINE LOA 0 5453 5119 2 599 8288 42 58 1 chr2RHet 1907789 1908889 -1379872 - Baggins1 LINE LOA -487 4966 3804 2 599 11184 45 48 1 chr2RHet 1908891 1910921 -1377840 - Baggins1 LINE LOA -2216 3237 1113 2 599 2002 64 34 11 chr2RHet 1910921 1911430 -1377331 - Baggins1 LINE LOA -4582 871 297 2 599 2287 131 34 6 chr2RHet 1911431 1911899 -1376862 - S_DM DNA Tc1 -1255 481 1 2 599 227 185 18 18 chr2RHet 1912066 1912121 -1376640 - BATUMI_I LTR Pao -2081 5882 5828 2 599 239 238 36 0 chr2RHet 1912160 1912244 -1376517 + Invader2_I LTR Gypsy 4310 4396 -196 2 599 393 291 47 42 chr2RHet 1912489 1912937 -1375824 - G7_DM LINE Jockey -318 874 702 2 599 317 77 0 0 chr2RHet 1913527 1913575 -1375186 - STALKER4_LTR LTR Gypsy -100 302 255 2 599 9908 40 0 1 chr2RHet 1913575 1914819 -1373942 - TC1_DM DNA Tc1 0 1666 424 2 599 256 103 0 0 chr2RHet 1914825 1914864 -1373897 - Stalker2_LTR LTR Gypsy -165 259 221 2 599 714 123 8 0 chr2RHet 1914857 1914987 -1373774 - STALKER4_LTR LTR Gypsy -271 131 1 2 599 376 135 70 96 chr2RHet 1914987 1915143 -1373618 - STALKER4_I LTR Gypsy 0 6530 6379 2 599 791 319 52 36 chr2RHet 1915162 1915722 -1373039 + Gypsy_I LTR Gypsy 5109 5895 -612 2 599 364 290 8 8 chr2RHet 1915728 1915860 -1372901 + DM1731_I LTR Copia 517 648 -3328 2 599 571 308 9 9 chr2RHet 1915976 1916199 -1372562 + DM1731_I LTR Copia 1583 1805 -2171 2 599 545 273 0 0 chr2RHet 1916217 1916389 -1372372 + DM1731_I LTR Copia 1967 2138 -1838 2 599 1481 57 0 0 chr2RHet 1916513 1916705 -1372056 + ROOA_I LTR Pao 4441 4632 -2217 2 599 242 108 0 0 chr2RHet 1916719 1916756 -1372005 + ROOA_I LTR Pao 5567 5603 -1246 2 599 226 118 0 0 chr2RHet 1916935 1916969 -1371792 + ROOA_I LTR Pao 5349 5382 -1467 2 599 7576 50 102 0 chr2RHet 1916988 1918088 -1370673 + ROOA_I LTR Pao 5372 6583 -266 2 599 309 45 0 0 chr2RHet 1918083 1918127 -1370634 + ROOA_LTR LTR Pao 14 57 -329 2 599 2452 317 61 25 chr2RHet 1918161 1919809 -1368952 + DM1731_I LTR Copia 2269 3975 -1 2 599 2075 83 27 24 chr2RHet 1919886 1920257 -1368504 + STALKER4_I LTR Gypsy 3124 3495 -3035 2 599 2755 39 47 0 chr2RHet 1920264 1920624 -1368137 + R1-2_DM LINE R1 1189 1565 -1651 2 599 4837 0 0 0 chr2RHet 1920625 1921183 -1367578 + ACCORD_LTR LTR Gypsy 1 558 0 2 599 2930 94 29 5 chr2RHet 1921183 1921631 -1367130 + R1-2_DM LINE R1 1700 2158 -1058 2 599 384 198 23 11 chr2RHet 1921663 1921750 -1367011 + R1_DM LINE R1 5257 5344 -12 2 599 579 78 67 0 chr2RHet 1921769 1921859 -1366902 + DNAREP1_DM LINE Penelope 1 96 -498 2 599 2055 126 143 13 chr2RHet 1922391 1922776 -1365985 + NINJA_I LTR Pao 5272 5706 -305 2 599 2073 183 62 0 chr2RHet 1922768 1923200 -1365561 - DMRT1B LINE R1 -2963 2220 1762 2 599 239 138 82 49 chr2RHet 1923190 1923251 -1365510 - DMRT1B LINE R1 -3789 1394 1332 2 599 986 194 0 0 chr2RHet 1923246 1923457 -1365304 - DMRT1B LINE R1 -4029 1154 944 2 599 2035 42 0 7 chr2RHet 1923455 1923740 -1365021 - TRANSIB1 DNA Transib -8 3006 2724 2 599 4409 22 2 0 chr2RHet 1923738 1924293 -1364468 - TRANSIB1 DNA Transib -2247 767 212 2 599 380 0 0 0 chr2RHet 1924292 1924338 -1364423 - TRANSIB1 DNA Transib -2968 46 1 2 599 308 213 0 0 chr2RHet 1924340 1924401 -1364360 - FW_DM LINE Jockey -3164 1528 1468 2 599 370 101 29 0 chr2RHet 1925142 1925211 -1363550 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 599 446 194 86 7 chr2RHet 1925233 1925373 -1363388 + DNAREP1_DM LINE Penelope 187 337 -257 2 599 251 294 0 0 chr2RHet 1925381 1925473 -1363288 + Stalker2_I LTR Gypsy 5949 6040 -1362 2 599 2455 124 12 28 chr2RHet 1925827 1926257 -1362504 - Invader1_LTR LTR Gypsy 0 423 1 2 599 292 167 0 0 chr2RHet 1926262 1926310 -1362451 + DNAREP1_DM LINE Penelope 2 49 -545 2 599 933 167 80 18 chr2RHet 1926347 1926572 -1362189 + DNAREP1_DM LINE Penelope 356 594 0 2 599 251 193 0 34 chr2RHet 1926794 1926853 -1361908 + DNAREP1_DM LINE Penelope 192 248 -346 2 599 872 144 207 0 chr2RHet 1926892 1927100 -1361661 + DNAREP1_DM LINE Penelope 132 382 -212 2 599 331 171 92 0 chr2RHet 1929129 1929205 -1359556 + DNAREP1_DM LINE Penelope 1 83 -511 2 599 579 97 57 114 chr2RHet 1929575 1929715 -1359046 - ROVER-LTR_DM LTR Gypsy -235 132 1 2 599 2270 153 7 13 chr2RHet 1930371 1930862 -1357899 + Gypsy10_I LTR Gypsy 775 1409 -3869 2 599 7282 181 43 18 chr2RHet 1930862 1933437 -1355324 + Gypsy10_I LTR Gypsy 2128 5371 -1641 2 599 8113 48 19 50 chr2RHet 1933640 1934807 -1353954 + Gypsy10_I LTR Gypsy 4148 5278 0 2 599 2631 49 49 0 chr2RHet 1934807 1935154 -1353607 + Gypsy10_LTR LTR Gypsy 1 364 0 2 599 967 87 296 0 chr2RHet 1935192 1935388 -1353373 + STALKER4_I LTR Gypsy 2702 2955 -3575 2 599 317 288 53 45 chr2RHet 1935581 1935828 -1352933 + DM1731_I LTR Copia 254 502 -3474 2 599 3281 22 51 0 chr2RHet 1935827 1936237 -1352524 + ROOA_I LTR Pao 3148 3578 -3271 2 599 2265 42 62 0 chr2RHet 1936238 1936546 -1352215 + ROOA_I LTR Pao 4078 4404 -2445 2 599 3557 34 27 0 chr2RHet 1936541 1936987 -1351774 + DIVER2_I LTR Pao 2995 3452 -695 2 599 1274 79 4 9 chr2RHet 1937003 1937232 -1351529 - Gypsy11_I LTR Gypsy -176 3348 3121 2 599 8072 72 21 3 chr2RHet 1937251 1938427 -1350334 - STALKER4_I LTR Gypsy -668 5862 4665 2 599 3158 80 113 0 chr2RHet 1938436 1938923 -1349838 - STALKER4_I LTR Gypsy -2008 4522 3981 2 599 584 49 0 0 chr2RHet 1938923 1939004 -1349757 - Stalker2_I LTR Gypsy -3433 3969 3889 2 599 1008 89 429 0 chr2RHet 1939056 1939292 -1349469 - R1_DM LINE R1 -1112 4244 3908 2 599 206 130 90 13 chr2RHet 1939327 1939405 -1349356 + (TATAA)n Simple_repeat Simple_repeat 5 88 0 2 599 621 168 88 0 chr2RHet 1939460 1939585 -1349176 - DMCR1A LINE CR1 -869 3601 3466 2 599 390 177 0 0 chr2RHet 1939621 1939700 -1349061 - DMCR1A LINE CR1 -1404 3066 2988 2 599 227 311 0 13 chr2RHet 1940000 1940075 -1348686 + NINJA_I LTR Pao 1742 1815 -4196 2 599 351 182 0 13 chr2RHet 1940068 1940146 -1348615 + NINJA_I LTR Pao 2942 3018 -2993 2 599 472 180 11 0 chr2RHet 1940149 1940238 -1348523 + NINJA_I LTR Pao 5020 5109 -902 2 599 375 214 57 68 chr2RHet 1940313 1940489 -1348272 + Gypsy3_LTR LTR Gypsy 112 285 -113 2 599 235 65 21 21 chr2RHet 1941150 1941197 -1347564 + (TAA)n Simple_repeat Simple_repeat 2 48 0 2 599 385 226 125 5 chr2RHet 1941628 1941828 -1346933 - DNAREP1_DM LINE Penelope -274 320 97 2 599 228 320 0 0 chr2RHet 1942427 1942505 -1346256 + OSVALDO_I LTR Gypsy 2237 2314 -4339 2 599 2165 64 22 0 chr2RHet 1942565 1942877 -1345884 - Gypsy10_I LTR Gypsy -4331 947 629 2 599 2083 57 15 51 chr2RHet 1942871 1943202 -1345559 - Gypsy10_I LTR Gypsy -4959 319 1 2 599 2973 28 0 3 chr2RHet 1943202 1943567 -1345194 - Gypsy10_LTR LTR Gypsy 0 364 1 2 599 444 309 63 36 chr2RHet 1943733 1943985 -1344776 + LINEJ1_DM LINE Jockey 995 1253 -3767 2 599 1022 319 49 20 chr2RHet 1944029 1944576 -1344185 + Jockey2 LINE Jockey 600 1162 -2266 2 599 462 314 0 0 chr2RHet 1944633 1944792 -1343969 + LINEJ1_DM LINE Jockey 2564 2722 -2298 2 599 210 173 52 26 chr2RHet 1944871 1944948 -1343813 + (TTAA)n Simple_repeat Simple_repeat 4 82 0 2 599 590 27 0 0 chr2RHet 1945272 1945345 -1343416 - DIVER2_I LTR Pao -1179 2968 2896 2 599 384 21 0 0 chr2RHet 1945345 1945392 -1343369 - DIVER2_I LTR Pao -4100 47 1 2 599 3248 21 0 0 chr2RHet 1945392 1945777 -1342984 - DIVER2_LTR LTR Pao 0 385 1 2 599 3341 90 31 2 chr2RHet 1945800 1946321 -1342440 + I_DM LINE I 4929 5464 -767 2 599 7681 211 149 5 chr2RHet 1946456 1948474 -1340287 + Invader3_I LTR Gypsy 1 2309 -2579 2 599 5260 146 39 12 chr2RHet 1948487 1949506 -1339255 + Invader3_I LTR Gypsy 2941 4039 -849 2 599 935 152 41 20 chr2RHet 1949500 1949695 -1339066 + Invader3_I LTR Gypsy 4562 4760 -128 2 599 14358 8 0 0 chr2RHet 1949728 1951409 -1337352 - DOC2_DM LINE Jockey -437 4356 2676 2 599 1359 193 56 7 chr2RHet 1951433 1951735 -1337026 + MDG1_I LTR Gypsy 3676 3992 -2604 2 599 1096 190 17 4 chr2RHet 1951924 1952157 -1336604 + MDG1_I LTR Gypsy 4024 4259 -2337 2 599 2979 39 122 3 chr2RHet 1952166 1952781 -1335980 - TC1-2_DM DNA Tc1 -956 688 1 2 599 220 228 37 52 chr2RHet 1952819 1952953 -1335808 + T-rich Low_complexity Low_complexity 2 133 0 2 599 8745 23 13 0 chr2RHet 1954202 1955293 -1333468 + PROTOP_A DNA P 1 1105 0 2 599 241 236 0 0 chr2RHet 1955995 1956050 -1332711 - BATUMI_I LTR Pao -2372 5591 5537 2 599 270 355 79 34 chr2RHet 1956787 1957257 -1331504 - MAX_I LTR Pao -3218 4696 4206 2 599 28 61 0 0 chr2RHet 1958387 1958436 -1330325 + AT_rich Low_complexity Low_complexity 1 49 0 2 599 25 51 0 0 chr2RHet 1958521 1958560 -1330201 + AT_rich Low_complexity Low_complexity 1 39 0 2 599 2893 123 5 101 chr2RHet 1959147 1959804 -1328957 + IDEFIX_LTR LTR Gypsy 1 594 0 2 599 22 70 0 0 chr2RHet 1959886 1959929 -1328832 + AT_rich Low_complexity Low_complexity 1 43 0 2 599 1401 36 20 35 chr2RHet 1959929 1960128 -1328633 - G5A_DM LINE Jockey -3 2838 2643 2 599 23 0 0 0 chr2RHet 1960253 1960276 -1328485 + AT_rich Low_complexity Low_complexity 1 23 0 2 599 10245 155 59 6 chr2RHet 1960517 1964209 -1324552 + IDEFIX_I LTR Gypsy 1 3886 -1742 2 599 610 298 78 31 chr2RHet 1965049 1965343 -1323418 + Gypsy12_I LTR Gypsy 3148 3455 -2091 2 74 567 191 36 62 chr2RHet 1965999 1966194 -1322567 - Gypsy8_I LTR Gypsy -4134 213 24 2 600 280 133 0 0 chr2RHet 1966204 1966249 -1322512 - Gypsy8_LTR LTR Gypsy -259 45 1 2 600 1649 151 305 12 chr2RHet 1966261 1966819 -1321942 - Gypsy8_I LTR Gypsy -1379 2968 2248 2 600 1894 178 72 43 chr2RHet 1966910 1967437 -1321324 - Gypsy8_I LTR Gypsy -2870 1477 1035 2 600 250 241 0 0 chr2RHet 1967454 1967512 -1321249 - Gypsy8_I LTR Gypsy -4220 2433 2376 2 600 2921 210 53 54 chr2RHet 1967529 1968554 -1320207 - Gypsy8_I LTR Gypsy -4338 2315 409 2 600 658 244 34 14 chr2RHet 1968761 1968969 -1319792 - OSVALDO_I LTR Gypsy -6029 624 413 2 600 1483 167 32 10 chr2RHet 1969446 1969939 -1318822 - DNAREP1_DM LINE Penelope -262 332 1 2 600 23 0 0 0 chr2RHet 1970098 1970121 -1318640 + AT_rich Low_complexity Low_complexity 1 23 0 2 600 4484 162 122 4 chr2RHet 1970283 1971219 -1317542 + DMCR1A LINE CR1 656 1701 -2769 2 600 1229 142 207 0 chr2RHet 1971214 1971475 -1317286 + DMCR1A LINE CR1 2704 3018 -1452 2 600 705 168 7 7 chr2RHet 1971852 1971990 -1316771 - FW3_DM LINE Jockey -434 2698 2561 2 600 536 195 136 7 chr2RHet 1972051 1972206 -1316555 - FW3_DM LINE Jockey -1888 1244 1070 2 600 365 60 0 0 chr2RHet 1973160 1973210 -1315551 - DNAREP1_DM LINE Penelope -481 113 64 2 600 424 162 0 0 chr2RHet 1973328 1973402 -1315359 + DNAREP1_DM LINE Penelope 11 84 -510 2 600 888 106 166 0 chr2RHet 1973381 1973532 -1315229 + DNAREP1_DM LINE Penelope 370 545 -49 2 600 28 29 0 0 chr2RHet 1974053 1974088 -1314673 + AT_rich Low_complexity Low_complexity 1 35 0 2 600 24 32 0 0 chr2RHet 1974514 1974545 -1314216 + AT_rich Low_complexity Low_complexity 1 31 0 2 600 21 71 0 0 chr2RHet 1974604 1974646 -1314115 + AT_rich Low_complexity Low_complexity 1 42 0 2 600 369 290 7 7 chr2RHet 1974957 1975103 -1313658 - Invader6_I LTR Gypsy -554 3545 3400 2 600 2484 301 82 36 chr2RHet 1975106 1976821 -1311940 - MICROPIA_I LTR Gypsy -922 3554 1801 2 600 271 246 58 40 chr2RHet 1976824 1976870 -1311891 + TABOR_LTR LTR Gypsy 1 144 -308 2 600 283 288 88 29 chr2RHet 1976870 1977006 -1311755 + T412LTR LTR LTR 42 185 -296 2 600 271 246 58 40 chr2RHet 1977006 1977031 -1311730 + TABOR_LTR LTR Gypsy 145 230 -222 2 600 370 222 89 80 chr2RHet 1977290 1977555 -1311206 + BLOOD_I LTR Gypsy 113 307 -6306 2 600 23 0 0 0 chr2RHet 1977653 1977676 -1311085 + AT_rich Low_complexity Low_complexity 1 23 0 2 600 28 48 0 0 chr2RHet 1977751 1977793 -1310968 + AT_rich Low_complexity Low_complexity 1 42 0 2 600 14304 208 18 9 chr2RHet 1977871 1981911 -1306850 + DM412 LTR Gypsy 2101 6246 -651 2 600 1586 15 20 10 chr2RHet 1981914 1982115 -1306646 - FROGGER_LTR LTR Copia 0 203 1 2 600 7619 22 37 11 chr2RHet 1982115 1983081 -1305680 - FROGGER_I LTR Copia 0 2077 1087 2 600 2387 24 0 26 chr2RHet 1983085 1983391 -1305370 - FROGGER_I LTR Copia -1224 853 556 2 600 241 295 81 44 chr2RHet 1983412 1983685 -1305076 - Copia2_I LTR Copia -2523 1639 1357 2 600 36 23 0 0 chr2RHet 1984914 1984957 -1303804 + AT_rich Low_complexity Low_complexity 1 43 0 2 600 907 18 0 0 chr2RHet 1984957 1985069 -1303692 - FROGGER_I LTR Copia -1965 112 1 2 600 1702 15 0 0 chr2RHet 1985069 1985272 -1303489 - FROGGER_LTR LTR Copia 0 203 1 2 600 906 236 23 0 chr2RHet 1985274 1985583 -1303178 + Gypsy11_I LTR Gypsy 3069 3384 -140 2 600 246 32 0 0 chr2RHet 1985622 1985653 -1303108 + (TAA)n Simple_repeat Simple_repeat 3 33 0 2 600 292 146 0 0 chr2RHet 1985759 1985805 -1302956 + DM412 LTR Gypsy 6742 6787 -110 2 600 271 246 58 40 chr2RHet 1985805 1985851 -1302910 + TABOR_LTR LTR Gypsy 1 144 -308 2 600 283 288 88 29 chr2RHet 1985851 1985987 -1302774 + T412LTR LTR LTR 42 185 -296 2 600 271 246 58 40 chr2RHet 1985987 1986012 -1302749 + TABOR_LTR LTR Gypsy 145 230 -222 2 600 395 256 14 36 chr2RHet 1986301 1986439 -1302322 - MICROPIA_I LTR Gypsy -2699 1777 1643 2 600 682 334 24 13 chr2RHet 1987027 1987442 -1301319 - MICROPIA_I LTR Gypsy -3851 625 206 2 600 23 68 0 0 chr2RHet 1987514 1987558 -1301203 + AT_rich Low_complexity Low_complexity 1 44 0 2 600 26 50 0 0 chr2RHet 1987739 1987779 -1300982 + AT_rich Low_complexity Low_complexity 1 40 0 2 600 32 67 0 0 chr2RHet 1988091 1988151 -1300610 + AT_rich Low_complexity Low_complexity 1 60 0 2 600 4609 81 73 1 chr2RHet 1989500 1990196 -1298565 - BS3_DM LINE Jockey -15 1775 1030 2 600 2960 196 90 7 chr2RHet 1990194 1991419 -1297342 - BS3_DM LINE Jockey -886 904 308 2 600 3286 140 114 2 chr2RHet 1991418 1992557 -1296204 - BS3_DM LINE Jockey -3110 1611 345 2 600 226 244 25 37 chr2RHet 1992644 1992725 -1296036 - G5_DM LINE Jockey -4370 486 407 2 600 345 100 0 0 chr2RHet 1992758 1992808 -1295953 - BS3_DM LINE Jockey -4404 317 268 2 600 2065 55 7 0 chr2RHet 1992832 1993105 -1295656 + G5_DM LINE Jockey 3972 4246 -610 2 600 5612 25 1 0 chr2RHet 1993104 1993798 -1294963 - NINJA_I LTR Pao -1318 4693 3999 2 600 22378 28 2 11 chr2RHet 1993775 1996647 -1292114 - NINJA_I LTR Pao -3164 2847 1 2 600 2367 41 3 28 chr2RHet 1996647 1996972 -1291789 - NINJA_LTR LTR Pao 0 317 1 2 600 748 56 9 0 chr2RHet 1996972 1997079 -1291682 + G5_DM LINE Jockey 4737 4844 -12 2 600 69 13 0 0 chr2RHet 1997670 1997746 -1291015 + AT_rich Low_complexity Low_complexity 1 76 0 2 600 21 0 0 0 chr2RHet 1998099 1998120 -1290641 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 2715 56 53 0 chr2RHet 1998151 1998527 -1290234 + G5_DM LINE Jockey 3972 4367 -489 2 600 1812 45 4 0 chr2RHet 1998524 1998766 -1289995 + G5_DM LINE Jockey 4602 4844 -12 2 600 69 13 0 0 chr2RHet 1999356 1999432 -1289329 + AT_rich Low_complexity Low_complexity 1 76 0 2 600 21 0 0 0 chr2RHet 1999785 1999806 -1288955 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 1195 61 6 0 chr2RHet 1999837 2000000 -1288761 + G5_DM LINE Jockey 3972 4135 -721 2 600 1594 52 89 0 chr2RHet 2000000 2000213 -1288548 + G5_DM LINE Jockey 4136 4367 -489 2 600 1918 40 12 8 chr2RHet 2000210 2000464 -1288297 + G5_DM LINE Jockey 4602 4856 0 2 600 1603 107 4 4 chr2RHet 2000463 2000707 -1288054 - BS2 LINE Jockey -4464 257 14 2 600 32 26 0 0 chr2RHet 2000961 2001000 -1287761 + AT_rich Low_complexity Low_complexity 1 39 0 2 600 47 67 0 0 chr2RHet 2001120 2001209 -1287552 + AT_rich Low_complexity Low_complexity 1 89 0 2 600 21 0 0 0 chr2RHet 2001586 2001607 -1287154 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 42 57 0 0 chr2RHet 2001781 2001851 -1286910 + AT_rich Low_complexity Low_complexity 1 70 0 2 600 334 172 203 79 chr2RHet 2001969 2002146 -1286615 + DNAREP1_DM LINE Penelope 16 214 -380 2 600 870 171 67 11 chr2RHet 2002130 2002344 -1286417 - DNAREP1_DM LINE Penelope -262 332 117 2 600 1067 114 24 0 chr2RHet 2002384 2002550 -1286211 - DNAREP1_DM LINE Penelope -419 175 6 2 600 231 139 0 0 chr2RHet 2002557 2002600 -1286161 - DM176_I LTR Gypsy -1654 4766 4724 2 600 69 13 0 0 chr2RHet 2003183 2003259 -1285502 + AT_rich Low_complexity Low_complexity 1 76 0 2 600 3780 73 16 4 chr2RHet 2035531 2036238 -1252523 + G5_DM LINE Jockey 3972 4856 0 2 600 1530 98 43 4 chr2RHet 2036237 2036472 -1252289 - BS2 LINE Jockey -4464 257 14 2 600 31 58 0 0 chr2RHet 2036677 2036729 -1252032 + AT_rich Low_complexity Low_complexity 1 52 0 2 600 192 40 0 0 chr2RHet 2036846 2036871 -1251890 + (TAA)n Simple_repeat Simple_repeat 1 25 0 2 600 21 0 0 0 chr2RHet 2037306 2037327 -1251434 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 180 0 0 0 chr2RHet 2037779 2037799 -1250962 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 600 39 68 0 0 chr2RHet 2037800 2037874 -1250887 + AT_rich Low_complexity Low_complexity 1 74 0 2 600 21 0 0 0 chr2RHet 2038208 2038229 -1250532 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 6634 36 5 0 chr2RHet 2038260 2039054 -1249707 + G5_DM LINE Jockey 3972 4769 -87 2 600 248 136 23 0 chr2RHet 2039042 2039086 -1249675 - BS2 LINE Jockey -4596 125 81 2 600 42 57 0 0 chr2RHet 2039400 2039470 -1249291 + AT_rich Low_complexity Low_complexity 1 70 0 2 600 259 98 18 73 chr2RHet 2039588 2039643 -1249118 + DNAREP1_DM LINE Penelope 16 67 -527 2 600 21 0 0 0 chr2RHet 2039667 2039688 -1249073 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 3213 48 5 0 chr2RHet 2039719 2040113 -1248648 + G5_DM LINE Jockey 3972 4367 -489 2 600 1879 44 12 8 chr2RHet 2040110 2040364 -1248397 + G5_DM LINE Jockey 4602 4856 0 2 600 1597 111 4 4 chr2RHet 2040363 2040607 -1248154 - BS2 LINE Jockey -4464 257 14 2 600 36 0 0 0 chr2RHet 2040859 2040895 -1247866 + AT_rich Low_complexity Low_complexity 1 36 0 2 600 192 40 0 0 chr2RHet 2041013 2041038 -1247723 + (TAA)n Simple_repeat Simple_repeat 1 25 0 2 600 21 0 0 0 chr2RHet 2041474 2041495 -1247266 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 42 57 0 0 chr2RHet 2041634 2041704 -1247057 + AT_rich Low_complexity Low_complexity 1 70 0 2 600 382 159 203 79 chr2RHet 2041822 2041999 -1246762 + DNAREP1_DM LINE Penelope 16 214 -380 2 600 833 180 24 24 chr2RHet 2041983 2042200 -1246561 - DNAREP1_DM LINE Penelope -262 332 117 2 600 1019 115 19 0 chr2RHet 2042255 2042412 -1246349 - DNAREP1_DM LINE Penelope -429 165 6 2 600 231 139 0 0 chr2RHet 2042419 2042462 -1246299 - DM176_I LTR Gypsy -1654 4766 4724 2 600 63 51 0 0 chr2RHet 2043045 2043143 -1245618 + AT_rich Low_complexity Low_complexity 1 98 0 2 600 21 0 0 0 chr2RHet 2043478 2043499 -1245262 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 3256 50 0 0 chr2RHet 2043530 2043926 -1244835 + G5_DM LINE Jockey 3972 4367 -489 2 600 1868 48 12 8 chr2RHet 2043923 2044177 -1244584 + G5_DM LINE Jockey 4602 4856 0 2 600 1572 112 8 4 chr2RHet 2044176 2044419 -1244342 - BS2 LINE Jockey -4464 257 14 2 600 30 27 0 0 chr2RHet 2044671 2044708 -1244053 + AT_rich Low_complexity Low_complexity 1 37 0 2 600 210 37 0 0 chr2RHet 2044825 2044852 -1243909 + (TAA)n Simple_repeat Simple_repeat 1 27 0 2 600 41 58 0 0 chr2RHet 2045481 2045550 -1243211 + AT_rich Low_complexity Low_complexity 1 69 0 2 600 420 163 188 73 chr2RHet 2045641 2045833 -1242928 + DNAREP1_DM LINE Penelope 1 214 -380 2 600 665 143 115 13 chr2RHet 2045833 2045989 -1242772 - DNAREP1_DM LINE Penelope -303 291 120 2 600 1047 108 19 0 chr2RHet 2046045 2046202 -1242559 - DNAREP1_DM LINE Penelope -429 165 6 2 600 231 139 0 0 chr2RHet 2046209 2046252 -1242509 - DM176_I LTR Gypsy -1654 4766 4724 2 600 283 178 439 8 chr2RHet 2046280 2046410 -1242351 + PROTOP DNA P 1 186 -4294 2 600 55 40 0 0 chr2RHet 2046835 2046911 -1241850 + AT_rich Low_complexity Low_complexity 1 76 0 2 600 2677 73 13 2 chr2RHet 2047320 2047880 -1240881 + G5_DM LINE Jockey 3972 4710 -146 2 600 41974 4 0 2 chr2RHet 2047906 2052611 -1236150 + DOC LINE Jockey 32 4725 0 2 600 1070 52 13 13 chr2RHet 2052609 2052766 -1235995 + G5_DM LINE Jockey 4700 4856 0 2 600 1584 115 4 4 chr2RHet 2052765 2053009 -1235752 - BS2 LINE Jockey -4464 257 14 2 600 30 27 0 0 chr2RHet 2053261 2053298 -1235463 + AT_rich Low_complexity Low_complexity 1 37 0 2 600 192 40 0 0 chr2RHet 2053415 2053440 -1235321 + (TAA)n Simple_repeat Simple_repeat 1 25 0 2 600 48 43 0 0 chr2RHet 2053978 2054047 -1234714 + AT_rich Low_complexity Low_complexity 1 69 0 2 600 420 163 188 73 chr2RHet 2054131 2054323 -1234438 + DNAREP1_DM LINE Penelope 1 214 -380 2 600 655 149 115 13 chr2RHet 2054323 2054479 -1234282 - DNAREP1_DM LINE Penelope -303 291 120 2 600 1000 121 19 0 chr2RHet 2054535 2054692 -1234069 - DNAREP1_DM LINE Penelope -429 165 6 2 600 231 139 0 0 chr2RHet 2054699 2054742 -1234019 - DM176_I LTR Gypsy -1654 4766 4724 2 600 302 171 439 8 chr2RHet 2054770 2054900 -1233861 + PROTOP_B DNA P 1 186 -967 2 600 62 26 0 0 chr2RHet 2055045 2055121 -1233640 + AT_rich Low_complexity Low_complexity 1 76 0 2 600 3806 72 16 4 chr2RHet 2055526 2056233 -1232528 + G5_DM LINE Jockey 3972 4856 0 2 600 1635 103 4 4 chr2RHet 2056232 2056476 -1232285 - BS2 LINE Jockey -4464 257 14 2 600 925 139 24 0 chr2RHet 2057929 2058095 -1230666 - DNAREP1_DM LINE Penelope -419 175 6 2 600 212 0 36 0 chr2RHet 2058738 2058766 -1229995 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 600 3581 74 16 4 chr2RHet 2059203 2059910 -1228851 + G5_DM LINE Jockey 3972 4856 0 2 600 1525 107 4 4 chr2RHet 2059909 2060153 -1228608 - BS2 LINE Jockey -4464 257 14 2 600 234 220 19 48 chr2RHet 2060527 2060632 -1228129 + A-rich Low_complexity Low_complexity 2 103 0 2 600 24 32 0 0 chr2RHet 2061042 2061073 -1227688 + AT_rich Low_complexity Low_complexity 1 31 0 2 600 19957 1 0 0 chr2RHet 2061814 2064120 -1224641 + DOC LINE Jockey 2420 4725 0 2 600 945 132 24 0 chr2RHet 2064189 2064355 -1224406 - DNAREP1_DM LINE Penelope -419 175 6 2 600 43 64 0 0 chr2RHet 2064981 2065059 -1223702 + AT_rich Low_complexity Low_complexity 1 78 0 2 600 534 109 0 11 chr2RHet 2065508 2065601 -1223160 - DNAREP1_DM LINE Penelope 0 594 503 2 600 312 106 0 108 chr2RHet 2065595 2065669 -1223092 + Invader5_LTR LTR Gypsy 25 90 -262 2 600 2826 65 127 6 chr2RHet 2065663 2066358 -1222403 - DMCR1A LINE CR1 0 4470 3692 2 600 2094 20 0 0 chr2RHet 2066351 2066603 -1222158 - DMCR1A LINE CR1 -960 3510 3259 2 600 15182 36 41 11 chr2RHet 2066601 2068597 -1220164 - DMCR1A LINE CR1 -1799 2671 615 2 600 2623 27 0 3 chr2RHet 2068598 2068934 -1219827 - DMCR1A LINE CR1 -4135 335 1 2 600 1612 43 129 0 chr2RHet 2068949 2069181 -1219580 + Invader5_LTR LTR Gypsy 91 352 0 2 600 1434 80 0 0 chr2RHet 2069182 2069381 -1219380 + Invader5_I LTR Gypsy 2 200 -3134 2 600 931 80 53 0 chr2RHet 2069382 2069533 -1219228 + Mariner2_DM DNA Tc1 1 159 -753 2 600 885 302 6 1 chr2RHet 2070379 2070746 -1218015 - MICROPIA_I LTR Gypsy -1292 3184 2863 2 600 239 125 0 0 chr2RHet 2071114 2071154 -1217607 - BARI1 DNA Tc1 -1708 42 3 2 600 4412 30 28 2 chr2RHet 2071122 2071701 -1217060 + IDEFIX_LTR LTR Gypsy 1 594 0 2 600 25 51 0 0 chr2RHet 2072177 2072216 -1216545 + AT_rich Low_complexity Low_complexity 1 39 0 2 600 1027 53 0 0 chr2RHet 2072220 2072351 -1216410 + PROTOP_B DNA P 1023 1153 0 2 600 505 329 46 3 chr2RHet 2075157 2075441 -1213320 - MICROPIA_I LTR Gypsy -1696 2780 2485 2 600 637 288 35 76 chr2RHet 2075433 2075839 -1212922 - Invader6_I LTR Gypsy -1616 2483 2095 2 600 15681 207 11 6 chr2RHet 2076126 2079855 -1208906 + DM412 LTR Gypsy 2337 6575 -322 2 600 446 305 11 11 chr2RHet 2080153 2080342 -1208419 - MICROPIA_I LTR Gypsy -2515 1961 1773 2 600 3476 84 65 27 chr2RHet 2080534 2081122 -1207639 - CIRCE LINE Composite -1376 4980 4371 2 600 254 190 17 0 chr2RHet 2081266 2081324 -1207437 + DM176_LTR LTR Gypsy 308 366 -141 2 600 543 156 40 16 chr2RHet 2081341 2081465 -1207296 + DMTOM1_LTR LTR Gypsy 284 410 0 2 600 388 100 14 28 chr2RHet 2081465 2081528 -1207233 + DMTOM1_LTR LTR Gypsy 349 410 0 2 600 5468 84 8 79 chr2RHet 2081528 2082456 -1206305 - CIRCE LINE Composite -1979 4377 3516 2 600 793 283 7 21 chr2RHet 2082479 2082764 -1205997 - MICROPIA_I LTR Gypsy -2699 1777 1497 2 600 15427 49 69 3 chr2RHet 2082815 2085852 -1202909 + Baggins1 LINE LOA 2163 5401 -52 2 600 1949 153 141 2 chr2RHet 2085845 2086342 -1202419 + FB4_DM DNA Tc1 1851 2419 -1670 2 600 2730 30 0 0 chr2RHet 2086342 2086678 -1202083 - DM1731_LTR LTR Copia 0 336 1 2 600 4975 2 5 8 chr2RHet 2086678 2087267 -1201494 - DM1731_I LTR Copia 0 3976 3390 2 600 9591 5 0 0 chr2RHet 2087265 2088375 -1200386 - DM1731_I LTR Copia -510 3466 2357 2 600 18899 9 1 0 chr2RHet 2088373 2090586 -1198175 - DM1731_I LTR Copia -1761 2215 1 2 600 2717 33 0 0 chr2RHet 2090586 2090922 -1197839 - DM1731_LTR LTR Copia 0 336 1 2 600 4975 2 5 8 chr2RHet 2090922 2091511 -1197250 - DM1731_I LTR Copia 0 3976 3390 2 600 23001 8 0 0 chr2RHet 2091509 2094187 -1194574 - DM1731_I LTR Copia -510 3466 788 2 601 5922 5 0 18 chr2RHet 2126187 2126850 -1161911 - QUASIMODO_I LTR Gypsy -5409 651 1 2 601 6008 3 1 0 chr2RHet 2126850 2127507 -1161254 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 601 263 278 0 0 chr2RHet 2128272 2128344 -1160417 + DIVER2_I LTR Pao 4034 4105 -42 2 601 28 29 0 0 chr2RHet 2129705 2129740 -1159021 + AT_rich Low_complexity Low_complexity 1 35 0 2 601 1696 119 8 4 chr2RHet 2129780 2130033 -1158728 - PROTOP_B DNA P 0 1153 900 2 601 366 109 0 0 chr2RHet 2130036 2130100 -1158661 - PROTOP_B DNA P -435 718 655 2 601 798 168 5 136 chr2RHet 2130102 2130315 -1158446 - G7_DM LINE Jockey -156 1036 852 2 601 1015 61 264 11 chr2RHet 2130630 2130812 -1157949 - PROTOP_B DNA P -557 596 369 2 601 1757 132 31 9 chr2RHet 2130814 2131136 -1157625 + FB4_DM DNA Tc1 1087 1415 -2674 2 601 2262 150 3 0 chr2RHet 2131138 2131504 -1157257 + FB4_DM DNA Tc1 2057 2423 -1666 2 601 1790 81 93 0 chr2RHet 2131521 2131780 -1156981 - PROTOP_B DNA P -872 281 1 2 601 24 0 0 0 chr2RHet 2132104 2132128 -1156633 + AT_rich Low_complexity Low_complexity 1 24 0 2 601 782 103 0 0 chr2RHet 2132828 2132945 -1155816 - DNAREP1_DM LINE Penelope -445 149 33 2 601 8091 52 12 0 chr2RHet 2134264 2135248 -1153513 + Baggins1 LINE LOA 4067 5062 -391 2 601 902 49 148 0 chr2RHet 2135248 2135370 -1153391 + Baggins1 LINE LOA 5313 5452 -1 2 601 993 78 0 0 chr2RHet 2135381 2135510 -1153251 + DNAREP1_DM LINE Penelope 355 483 -111 2 601 21788 30 19 1 chr2RHet 2135552 2138089 -1150672 + DMCR1A LINE CR1 90 2671 -1799 2 601 4268 58 81 3 chr2RHet 2138087 2139181 -1149580 + DMCR1A LINE CR1 3259 4470 0 2 601 975 46 15 8 chr2RHet 2139180 2139312 -1149449 - FW3_DM LINE Jockey -2916 216 84 2 601 17790 161 62 67 chr2RHet 2139835 2143844 -1144917 - Gypsy2_I LTR Gypsy -1973 4162 171 2 601 1219 138 10 10 chr2RHet 2143895 2144100 -1144661 - Gypsy2_LTR LTR Gypsy -148 205 1 2 601 341 164 0 71 chr2RHet 2144113 2144198 -1144563 + TV1I LTR Gypsy 3026 3104 -2859 2 601 423 328 7 17 chr2RHet 2144339 2144640 -1144121 + IDEFIX_I LTR Gypsy 3123 3420 -2208 2 601 283 267 92 96 chr2RHet 2144689 2144938 -1143823 + IDEFIX_I LTR Gypsy 3611 3858 -1770 2 601 537 16 0 0 chr2RHet 2145343 2145404 -1143357 - Baggins1 LINE LOA -1 5452 5392 2 601 9993 44 52 0 chr2RHet 2145408 2146649 -1142112 - Baggins1 LINE LOA -314 5139 3835 2 601 42860 5 0 2 chr2RHet 2146655 2151357 -1137404 - DOC LINE Jockey -2 4723 32 2 601 13632 48 15 1 chr2RHet 2151389 2153032 -1135729 - Baggins1 LINE LOA -1625 3828 2163 2 601 872 296 7 16 chr2RHet 2153067 2153392 -1135369 + MICROPIA_I LTR Gypsy 1492 1817 -2282 2 601 5526 102 20 47 chr2RHet 2153390 2154275 -1134486 + CIRCE LINE Composite 3516 4376 -1980 2 601 4151 11 0 61 chr2RHet 2154275 2154782 -1133979 - MICROPIA_LTR LTR Gypsy 0 476 1 2 601 3799 80 65 27 chr2RHet 2154782 2155370 -1133391 + CIRCE LINE Composite 4371 4980 -1376 2 601 510 302 11 11 chr2RHet 2155567 2155751 -1133010 + MICROPIA_I LTR Gypsy 1778 1961 -2515 2 601 2713 195 34 10 chr2RHet 2156049 2156665 -1132096 - DM412 LTR Gypsy -322 6575 5945 2 601 2234 102 255 5 chr2RHet 2156778 2157202 -1131559 - DNAREP1_DM LINE Penelope -64 530 1 2 601 16325 53 32 2 chr2RHet 2158444 2160533 -1128228 - IVK_DM LINE I -2112 3290 1141 2 601 4390 62 87 2 chr2RHet 2160531 2161131 -1127630 - IVK_DM LINE I -4717 685 35 2 601 306 83 0 77 chr2RHet 2161851 2161903 -1126858 + PROTOP_B DNA P 12 59 -1094 2 601 21 0 0 0 chr2RHet 2161905 2161926 -1126835 + AT_rich Low_complexity Low_complexity 1 21 0 2 601 2185 133 199 2 chr2RHet 2161927 2162453 -1126308 - FB4_DM DNA Tc1 -1661 2428 1799 2 601 5274 46 0 0 chr2RHet 2162456 2163081 -1125680 - Baggins1 LINE LOA 0 5453 4829 2 601 11286 47 36 6 chr2RHet 2163080 2164484 -1124277 - Baggins1 LINE LOA -795 4658 3213 2 601 20566 49 83 11 chr2RHet 2164487 2167161 -1121600 - Baggins1 LINE LOA -2444 3009 143 2 601 702 38 123 143 chr2RHet 2167573 2167727 -1121034 + PROTOP_B DNA P 328 478 -675 2 601 368 139 97 0 chr2RHet 2167711 2167783 -1120978 + HOBO DNA hAT 330 408 -2608 2 601 2549 146 61 114 chr2RHet 2167773 2168447 -1120314 + HOBO DNA hAT 2337 2974 -42 2 601 26 0 0 0 chr2RHet 2168492 2168518 -1120243 + AT_rich Low_complexity Low_complexity 1 26 0 2 601 1211 97 44 17 chr2RHet 2168580 2168830 -1119931 + DNAREP1_DM LINE Penelope 1 299 -295 2 601 371 129 67 56 chr2RHet 2168812 2168902 -1119859 + DNAREP1_DM LINE Penelope 192 282 -312 2 601 677 143 0 50 chr2RHet 2168900 2169040 -1119721 + DNAREP1_DM LINE Penelope 199 331 -263 2 601 434 69 0 0 chr2RHet 2169040 2169098 -1119663 + DNAREP1_DM LINE Penelope 528 585 -9 2 601 15197 46 33 4 chr2RHet 2169944 2171816 -1116945 - Baggins1 LINE LOA -315 5138 3213 2 601 20678 48 77 12 chr2RHet 2171819 2174512 -1114249 - Baggins1 LINE LOA -2444 3009 143 2 601 702 38 123 143 chr2RHet 2174924 2175078 -1113683 + PROTOP_B DNA P 328 478 -675 2 601 368 139 97 0 chr2RHet 2175062 2175134 -1113627 + HOBO DNA hAT 330 408 -2608 2 601 366 88 40 90 chr2RHet 2175124 2175224 -1113537 + HOBO DNA hAT 2337 2431 -585 2 601 2560 165 63 53 chr2RHet 2175257 2175840 -1112921 + HOBO DNA hAT 2428 3016 0 2 601 26 0 0 0 chr2RHet 2175864 2175890 -1112871 + AT_rich Low_complexity Low_complexity 1 26 0 2 601 1236 110 56 23 chr2RHet 2175952 2176297 -1112464 + DNAREP1_DM LINE Penelope 1 322 -272 2 601 677 143 0 50 chr2RHet 2176295 2176435 -1112326 + DNAREP1_DM LINE Penelope 199 331 -263 2 601 434 69 0 0 chr2RHet 2176435 2176493 -1112268 + DNAREP1_DM LINE Penelope 528 585 -9 2 601 24 0 0 0 chr2RHet 2178157 2178181 -1110580 + AT_rich Low_complexity Low_complexity 1 24 0 2 601 9056 52 25 0 chr2RHet 2178218 2179328 -1109433 - Baggins1 LINE LOA 0 5453 4316 2 601 13531 39 33 19 chr2RHet 2179323 2181018 -1107743 - Baggins1 LINE LOA -3592 1861 143 2 601 702 38 123 143 chr2RHet 2181411 2181565 -1107196 + PROTOP_B DNA P 328 478 -675 2 601 368 139 97 0 chr2RHet 2181549 2181621 -1107140 + HOBO DNA hAT 330 408 -2608 2 601 2708 150 86 99 chr2RHet 2181611 2182300 -1106461 + HOBO DNA hAT 2337 3016 0 2 601 26 0 0 0 chr2RHet 2182324 2182350 -1106411 + AT_rich Low_complexity Low_complexity 1 26 0 2 601 1236 119 54 22 chr2RHet 2182412 2182757 -1106004 + DNAREP1_DM LINE Penelope 1 322 -272 2 601 655 114 14 64 chr2RHet 2182755 2182895 -1105866 + DNAREP1_DM LINE Penelope 199 331 -263 2 601 434 69 0 0 chr2RHet 2182895 2182953 -1105808 + DNAREP1_DM LINE Penelope 528 585 -9 2 601 4183 44 43 50 chr2RHet 2183719 2184299 -1104462 - Baggins1 LINE LOA -4735 718 143 2 601 702 38 123 143 chr2RHet 2184711 2184865 -1103896 + PROTOP_B DNA P 328 478 -675 2 601 368 139 97 0 chr2RHet 2184849 2184921 -1103840 + HOBO DNA hAT 330 408 -2608 2 601 366 88 40 90 chr2RHet 2184911 2185011 -1103750 + HOBO DNA hAT 2337 2431 -585 2 601 2602 161 63 53 chr2RHet 2185044 2185627 -1103134 + HOBO DNA hAT 2428 3016 0 2 601 26 0 0 0 chr2RHet 2185651 2185677 -1103084 + AT_rich Low_complexity Low_complexity 1 26 0 2 601 1236 110 56 23 chr2RHet 2185739 2186084 -1102677 + DNAREP1_DM LINE Penelope 1 322 -272 2 601 677 143 0 50 chr2RHet 2186082 2186222 -1102539 + DNAREP1_DM LINE Penelope 199 331 -263 2 601 434 69 0 0 chr2RHet 2186222 2186280 -1102481 + DNAREP1_DM LINE Penelope 528 585 -9 2 601 254 151 65 52 chr2RHet 2187912 2187989 -1100772 + HOBO DNA hAT 2503 2580 -436 2 601 9033 53 25 0 chr2RHet 2187991 2189101 -1099660 - Baggins1 LINE LOA 0 5453 4316 2 601 13531 39 33 19 chr2RHet 2189096 2190791 -1097970 - Baggins1 LINE LOA -3592 1861 143 2 601 702 38 123 143 chr2RHet 2191184 2191338 -1097423 + PROTOP_B DNA P 328 478 -675 2 601 368 139 97 0 chr2RHet 2191322 2191394 -1097367 + HOBO DNA hAT 330 408 -2608 2 601 2902 147 59 98 chr2RHet 2191384 2192091 -1096670 + HOBO DNA hAT 2337 3016 0 2 601 26 0 0 0 chr2RHet 2192115 2192141 -1096620 + AT_rich Low_complexity Low_complexity 1 26 0 2 601 1205 114 0 23 chr2RHet 2192203 2192448 -1096313 + DNAREP1_DM LINE Penelope 1 282 -312 2 601 537 122 16 73 chr2RHet 2192446 2192570 -1096191 + DNAREP1_DM LINE Penelope 199 315 -279 2 601 434 69 0 0 chr2RHet 2192574 2192632 -1096129 + DNAREP1_DM LINE Penelope 528 585 -9 2 601 254 151 65 52 chr2RHet 2194255 2194332 -1094429 + HOBO DNA hAT 2503 2580 -436 2 601 9049 52 25 0 chr2RHet 2194334 2195444 -1093317 - Baggins1 LINE LOA 0 5453 4316 2 601 14346 44 37 18 chr2RHet 2195439 2197264 -1091497 - Baggins1 LINE LOA -3592 1861 1 2 601 421 243 103 0 chr2RHet 2197289 2197425 -1091336 + HOBO DNA hAT 2621 2770 -246 2 601 25 51 0 0 chr2RHet 2199294 2199333 -1089428 + AT_rich Low_complexity Low_complexity 1 39 0 2 601 719 109 26 92 chr2RHet 2199774 2199926 -1088835 + DNAREP1_DM LINE Penelope 137 278 -316 2 601 1058 158 67 9 chr2RHet 2199912 2200135 -1088626 + DNAREP1_DM LINE Penelope 204 439 -155 2 601 285 269 92 9 chr2RHet 2200138 2200247 -1088514 + GTWIN_LTR LTR Gypsy 288 405 -90 2 601 2641 134 67 2 chr2RHet 2200566 2201530 -1087231 + DMRT1B LINE R1 1730 2823 -2360 2 601 2225 206 21 44 chr2RHet 2201529 2202051 -1086710 + GTWIN_I LTR Gypsy 4140 4649 -1772 2 601 3702 228 132 9 chr2RHet 2202040 2202976 -1085785 + GTWIN_I LTR Gypsy 5030 6168 -339 2 601 336 257 0 0 chr2RHet 2202991 2203061 -1085700 + GTWIN_LTR LTR Gypsy 171 240 -255 2 601 464 108 0 0 chr2RHet 2204490 2204555 -1084206 + DNAREP1_DM LINE Penelope 530 594 0 2 601 765 166 178 0 chr2RHet 2204553 2204719 -1084042 + DMCR1A LINE CR1 1368 1563 -2907 2 601 4817 2 0 0 chr2RHet 2204719 2205237 -1083524 + NOMAD_LTR LTR Gypsy 1 518 0 2 601 61464 1 0 1 chr2RHet 2205237 2211812 -1076949 + NOMAD_I LTR Gypsy 1 6572 0 2 601 4817 2 0 0 chr2RHet 2211812 2212330 -1076431 + NOMAD_LTR LTR Gypsy 1 518 0 2 601 673 231 111 21 chr2RHet 2212335 2212525 -1076236 + DMCR1A LINE CR1 1565 1771 -2699 2 601 1570 116 57 15 chr2RHet 2212536 2212799 -1075962 + DMCR1A LINE CR1 1814 2087 -2383 2 601 2308 147 67 12 chr2RHet 2212798 2213480 -1075281 + DMCR1A LINE CR1 2529 3341 -1129 2 601 2113 127 98 46 chr2RHet 2213775 2214213 -1074548 - DNAREP1_DM LINE Penelope -117 477 17 2 601 595 127 255 21 chr2RHet 2216261 2216406 -1072355 - DNAREP1_DM LINE Penelope -96 498 320 2 601 610 164 70 114 chr2RHet 2216757 2216984 -1071777 + DNAREP1_DM LINE Penelope 55 271 -323 2 601 524 98 11 11 chr2RHet 2216973 2217066 -1071695 + DNAREP1_DM LINE Penelope 223 315 -279 2 601 1061 62 0 0 chr2RHet 2217084 2217214 -1071547 + Baggins1 LINE LOA 67 196 -5257 2 601 6283 48 29 2 chr2RHet 2217214 2218565 -1070196 + Baggins1 LINE LOA 421 1861 -3592 2 601 8474 60 52 0 chr2RHet 2218560 2219642 -1069119 + Baggins1 LINE LOA 4316 5453 0 2 601 254 151 65 52 chr2RHet 2219644 2219721 -1069040 - HOBO DNA hAT -436 2580 2503 2 601 434 69 0 0 chr2RHet 2221344 2221402 -1067359 - DNAREP1_DM LINE Penelope -9 585 528 2 601 537 122 16 73 chr2RHet 2221406 2221530 -1067231 - DNAREP1_DM LINE Penelope -279 315 199 2 601 671 145 109 13 chr2RHet 2221528 2221723 -1067038 - DNAREP1_DM LINE Penelope -272 322 90 2 601 1236 92 0 28 chr2RHet 2221694 2221873 -1066888 - DNAREP1_DM LINE Penelope -420 174 1 2 601 26 0 0 0 chr2RHet 2221935 2221961 -1066800 + AT_rich Low_complexity Low_complexity 1 26 0 2 601 2708 150 86 99 chr2RHet 2221985 2222674 -1066087 - HOBO DNA hAT 0 3016 2337 2 601 368 139 97 0 chr2RHet 2222664 2222736 -1066025 - HOBO DNA hAT -2608 408 330 2 601 702 38 123 143 chr2RHet 2222720 2222874 -1065887 - PROTOP_B DNA P -675 478 328 2 601 13362 39 39 19 chr2RHet 2223286 2224971 -1063790 + Baggins1 LINE LOA 143 1861 -3592 2 601 8474 60 52 0 chr2RHet 2224966 2226048 -1062713 + Baggins1 LINE LOA 4316 5453 0 2 601 254 151 65 52 chr2RHet 2226050 2226127 -1062634 - HOBO DNA hAT -436 2580 2503 2 601 434 69 0 0 chr2RHet 2227750 2227808 -1060953 - DNAREP1_DM LINE Penelope -9 585 528 2 601 537 122 16 73 chr2RHet 2227812 2227936 -1060825 - DNAREP1_DM LINE Penelope -279 315 199 2 601 671 145 109 13 chr2RHet 2227934 2228129 -1060632 - DNAREP1_DM LINE Penelope -272 322 90 2 75 1236 92 0 28 chr2RHet 2228100 2228279 -1060482 - DNAREP1_DM LINE Penelope -420 174 1 2 602 26 0 0 0 chr2RHet 2228341 2228367 -1060394 + AT_rich Low_complexity Low_complexity 1 26 0 2 602 2708 150 86 99 chr2RHet 2228391 2229080 -1059681 - HOBO DNA hAT 0 3016 2337 2 602 368 139 97 0 chr2RHet 2229070 2229142 -1059619 - HOBO DNA hAT -2608 408 330 2 602 702 38 123 143 chr2RHet 2229126 2229280 -1059481 - PROTOP_B DNA P -675 478 328 2 602 13565 38 32 19 chr2RHet 2229692 2231388 -1057373 + Baggins1 LINE LOA 143 1861 -3592 2 602 8474 60 52 0 chr2RHet 2231383 2232465 -1056296 + Baggins1 LINE LOA 4316 5453 0 2 602 254 151 65 52 chr2RHet 2232467 2232544 -1056217 - HOBO DNA hAT -436 2580 2503 2 602 434 69 0 0 chr2RHet 2234167 2234225 -1054536 - DNAREP1_DM LINE Penelope -9 585 528 2 602 537 122 16 73 chr2RHet 2234229 2234353 -1054408 - DNAREP1_DM LINE Penelope -279 315 199 2 602 671 145 109 13 chr2RHet 2234351 2234546 -1054215 - DNAREP1_DM LINE Penelope -272 322 90 2 602 1236 92 0 28 chr2RHet 2234517 2234696 -1054065 - DNAREP1_DM LINE Penelope -420 174 1 2 602 26 0 0 0 chr2RHet 2234758 2234784 -1053977 + AT_rich Low_complexity Low_complexity 1 26 0 2 602 2708 150 86 99 chr2RHet 2234808 2235497 -1053264 - HOBO DNA hAT 0 3016 2337 2 602 368 139 97 0 chr2RHet 2235487 2235559 -1053202 - HOBO DNA hAT -2608 408 330 2 602 702 38 123 143 chr2RHet 2235543 2235697 -1053064 - PROTOP_B DNA P -675 478 328 2 602 253 250 0 0 chr2RHet 2236121 2236177 -1052584 - Gypsy5_I LTR Gypsy 0 6509 6454 2 602 7924 80 70 7 chr2RHet 2236625 2237755 -1051006 - BS3_DM LINE Jockey 0 1790 590 2 602 7000 207 65 10 chr2RHet 2237741 2239728 -1049033 - BS2 LINE Jockey -1477 3244 1148 2 602 269 217 103 17 chr2RHet 2239790 2239907 -1048854 - Gypsy5_I LTR Gypsy -4956 1553 1495 2 602 25 90 0 0 chr2RHet 2240269 2240336 -1048425 + AT_rich Low_complexity Low_complexity 1 67 0 2 602 2559 58 75 0 chr2RHet 2240612 2240958 -1047803 - Baggins1 LINE LOA -362 5091 4720 2 602 12931 52 73 1 chr2RHet 2240956 2243051 -1045710 - Baggins1 LINE LOA -852 4601 2354 2 602 3806 42 49 0 chr2RHet 2243049 2243521 -1045240 - Baggins1 LINE LOA -3523 1930 1436 2 602 8318 48 139 4 chr2RHet 2243574 2244702 -1044059 - Baggins1 LINE LOA -4163 1290 10 2 602 285 0 0 53 chr2RHet 2244711 2244749 -1044012 + Baggins1 LINE LOA 70 105 -5348 2 602 25 65 0 0 chr2RHet 2245403 2245449 -1043312 + AT_rich Low_complexity Low_complexity 1 46 0 2 602 603 334 83 31 chr2RHet 2245554 2246513 -1042248 - Gypsy5_I LTR Gypsy -1884 5808 4102 2 602 191 125 25 0 chr2RHet 2246770 2246810 -1041951 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 602 22 0 0 0 chr2RHet 2247393 2247415 -1041346 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 395 42 0 0 chr2RHet 2248178 2248226 -1040535 + DNAREP1_DM LINE Penelope 22 69 -525 2 602 2776 71 31 3 chr2RHet 2248431 2248813 -1039948 + BATUMI_I LTR Pao 7490 7882 -81 2 602 1729 67 4 32 chr2RHet 2248844 2249092 -1039669 + BATUMI_LTR LTR Pao 32 272 0 2 602 3023 48 42 0 chr2RHet 2249092 2249471 -1039290 - IVK_DM LINE I -5007 395 1 2 602 24 0 0 0 chr2RHet 2250131 2250155 -1038606 + AT_rich Low_complexity Low_complexity 1 24 0 2 602 1864 73 93 0 chr2RHet 2250479 2250738 -1038023 + PROTOP DNA P 1 283 -4197 2 602 2138 162 11 8 chr2RHet 2250755 2251134 -1037627 - FB4_DM DNA Tc1 -1666 2423 2044 2 602 986 144 22 11 chr2RHet 2251124 2251307 -1037454 - FB4_DM DNA Tc1 -2818 1271 1087 2 602 985 89 267 5 chr2RHet 2251299 2251501 -1037260 + PROTOP DNA P 355 609 -3871 2 602 256 260 0 0 chr2RHet 2251806 2251882 -1036879 + FW2_DM LINE Jockey 3545 3610 -351 2 602 1503 116 127 32 chr2RHet 2251891 2252175 -1036586 + G7_DM LINE Jockey 878 1188 -4 2 602 698 103 0 14 chr2RHet 2252169 2252316 -1036445 + PROTOP DNA P 576 721 -3759 2 602 1026 88 0 0 chr2RHet 2252362 2252498 -1036263 + PROTOP DNA P 4341 4479 -1 2 602 28 29 0 0 chr2RHet 2252538 2252573 -1036188 + AT_rich Low_complexity Low_complexity 1 35 0 2 602 263 278 0 0 chr2RHet 2253957 2254029 -1034732 - DIVER2_I LTR Pao -42 4105 4034 2 602 1085 150 146 18 chr2RHet 2254763 2255130 -1033631 - DNAREP1_DM LINE Penelope -64 530 90 2 602 1136 116 60 5 chr2RHet 2255134 2255334 -1033427 - DNAREP1_DM LINE Penelope -262 332 122 2 602 4261 244 71 27 chr2RHet 2255333 2256515 -1032246 - Gypsy6_I LTR Gypsy -2332 4680 3447 2 602 2328 23 8 0 chr2RHet 2256519 2256783 -1031978 - Invader2_LTR LTR Gypsy 0 266 1 2 602 25745 12 18 1 chr2RHet 2256783 2261301 -1027460 - Invader2_I LTR Gypsy 0 4592 1 2 602 2292 26 8 0 chr2RHet 2261301 2261565 -1027196 - Invader2_LTR LTR Gypsy 0 266 1 2 602 1306 260 3 12 chr2RHet 2261567 2261886 -1026875 - Gypsy6_I LTR Gypsy -3568 3444 3129 2 602 405 225 0 24 chr2RHet 2261934 2262016 -1026745 - Gypsy2_I LTR Gypsy -4257 1878 1799 2 602 719 304 201 50 chr2RHet 2262029 2262687 -1026074 - Gypsy3_I LTR Gypsy -3989 2188 1432 2 602 31 102 0 0 chr2RHet 2262886 2262994 -1025767 + AT_rich Low_complexity Low_complexity 1 108 0 2 602 3106 48 21 0 chr2RHet 2263252 2263628 -1025133 - Gypsy6A_LTR LTR Gypsy 0 420 37 2 602 1458 166 212 40 chr2RHet 2263799 2264207 -1024554 + G3_DM LINE Jockey 102 579 -4026 2 602 256 289 0 0 chr2RHet 2264598 2264674 -1024087 + DIVER2_I LTR Pao 2423 2498 -1649 2 602 669 354 32 17 chr2RHet 2265040 2265514 -1023247 + DIVER2_I LTR Pao 2867 3347 -800 2 602 526 266 0 0 chr2RHet 2265597 2265725 -1023036 + DIVER2_I LTR Pao 3526 3653 -494 2 602 209 108 0 26 chr2RHet 2266061 2266099 -1022662 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 2 602 655 170 76 46 chr2RHet 2266183 2266380 -1022381 + DMCR1A LINE CR1 4227 4429 -41 2 602 7921 24 2 51 chr2RHet 2266387 2267371 -1021390 - Gypsy12_LTR LTR Gypsy -1400 936 1 2 602 2538 46 3 5 chr2RHet 2267371 2267696 -1021065 - Gypsy6A_LTR LTR Gypsy -12 408 1 2 602 826 164 47 37 chr2RHet 2267696 2267905 -1020856 + DNAREP1_DM LINE Penelope 59 269 -325 2 602 246 265 100 47 chr2RHet 2268936 2269018 -1019743 + DIVER2_I LTR Pao 999 1177 -2970 2 602 543 126 0 11 chr2RHet 2269018 2269106 -1019655 + G3_DM LINE Jockey 103 189 -4416 2 602 390 185 75 101 chr2RHet 2269097 2269266 -1019495 + G3_DM LINE Jockey 364 579 -4026 2 602 405 327 40 26 chr2RHet 2269342 2269568 -1019193 + DIVER2_I LTR Pao 1594 1822 -2325 2 602 679 165 76 46 chr2RHet 2271199 2271396 -1017365 + DMCR1A LINE CR1 4227 4429 -41 2 602 1869 123 26 19 chr2RHet 2271853 2272308 -1016453 + DNAREP1_DM LINE Penelope 1 332 -262 2 602 618 101 25 8 chr2RHet 2272325 2272445 -1016316 - PROTOP DNA P -566 3914 3793 2 602 189 0 0 0 chr2RHet 2272445 2272466 -1016295 + (TTA)n Simple_repeat Simple_repeat 1 21 0 2 602 1891 69 156 0 chr2RHet 2272480 2272769 -1015992 - PROTOP DNA P -1014 3466 3133 2 602 2610 275 113 13 chr2RHet 2272771 2273864 -1014897 - Gypsy6_I LTR Gypsy -3753 3259 1784 2 602 1808 318 34 24 chr2RHet 2273931 2274613 -1014148 - Gypsy6_I LTR Gypsy -5379 1633 945 2 602 25 31 0 0 chr2RHet 2274765 2274797 -1013964 + AT_rich Low_complexity Low_complexity 1 32 0 2 602 41 82 0 0 chr2RHet 2274815 2274912 -1013849 + AT_rich Low_complexity Low_complexity 1 97 0 2 602 204 173 19 19 chr2RHet 2275082 2275135 -1013626 + (TGG)n Simple_repeat Simple_repeat 3 55 0 2 602 1501 66 95 20 chr2RHet 2275156 2275483 -1013278 - Gypsy6A_LTR LTR Gypsy 0 420 1 2 602 1794 139 22 57 chr2RHet 2275504 2275962 -1012799 - DNAREP1_DM LINE Penelope -270 324 2 2 602 28 0 0 0 chr2RHet 2276022 2276050 -1012711 + AT_rich Low_complexity Low_complexity 1 28 0 2 602 331 281 9 9 chr2RHet 2276339 2276454 -1012307 - TV1I LTR Gypsy -1836 4127 4013 2 602 2894 28 0 0 chr2RHet 2276528 2276855 -1011906 + PROTOP_A DNA P 1 327 -778 2 602 5740 11 0 18 chr2RHet 2276863 2277534 -1011227 + PROTOP_A DNA P 447 1105 0 2 602 37 0 0 0 chr2RHet 2277592 2277629 -1011132 + AT_rich Low_complexity Low_complexity 1 37 0 2 602 1895 38 4 28 chr2RHet 2277629 2277876 -1010885 - BATUMI_LTR LTR Pao 0 272 32 2 602 43895 80 45 50 chr2RHet 2277959 2285644 -1003117 - BATUMI_I LTR Pao -78 7836 1 2 602 1771 53 37 26 chr2RHet 2285644 2285913 -1002848 - BATUMI_LTR LTR Pao 0 272 1 2 602 1663 135 106 24 chr2RHet 2286278 2286657 -1002104 - DNAREP1_DM LINE Penelope -168 426 17 2 602 23 54 0 0 chr2RHet 2288084 2288121 -1000640 + AT_rich Low_complexity Low_complexity 1 37 0 2 602 2362 98 16 45 chr2RHet 2288364 2288790 -999971 - DM297_LTR LTR Gypsy 0 414 1 2 602 4120 73 72 17 chr2RHet 2288790 2289698 -999063 - DM297_I LTR Gypsy 0 6167 5210 2 602 4423 2 0 0 chr2RHet 2289752 2290258 -998503 + TABOR_LTR LTR Gypsy 1 506 0 2 602 19507 1 0 0 chr2RHet 2290258 2292562 -996199 + TABOR_I LTR Gypsy 1 2305 -4031 2 602 23 54 0 0 chr2RHet 2293270 2293307 -995454 + AT_rich Low_complexity Low_complexity 1 37 0 2 602 2362 98 16 45 chr2RHet 2293550 2293976 -994785 - DM297_LTR LTR Gypsy 0 414 1 2 602 4120 73 72 17 chr2RHet 2293976 2294884 -993877 - DM297_I LTR Gypsy 0 6167 5210 2 602 4423 2 0 0 chr2RHet 2294938 2295444 -993317 + TABOR_LTR LTR Gypsy 1 506 0 2 602 27410 1 0 0 chr2RHet 2295444 2298679 -990082 + TABOR_I LTR Gypsy 1 3236 -3100 2 602 933 167 80 18 chr2RHet 2298848 2299073 -989688 - DNAREP1_DM LINE Penelope 0 594 356 2 602 292 167 0 0 chr2RHet 2299110 2299158 -989603 - DNAREP1_DM LINE Penelope -545 49 2 2 602 2431 127 12 28 chr2RHet 2299163 2299593 -989168 + Invader1_LTR LTR Gypsy 1 423 0 2 602 241 281 10 0 chr2RHet 2299946 2300042 -988719 - TABOR_I LTR Gypsy -858 5478 5382 2 602 464 187 86 7 chr2RHet 2300046 2300186 -988575 - DNAREP1_DM LINE Penelope -257 337 187 2 602 501 144 25 0 chr2RHet 2300208 2300326 -988435 + (TA)n Simple_repeat Simple_repeat 2 122 0 2 602 23 78 0 0 chr2RHet 2300326 2300377 -988384 + AT_rich Low_complexity Low_complexity 1 51 0 2 602 452 81 0 0 chr2RHet 2300378 2300440 -988321 - DNAREP1_DM LINE Penelope -529 65 4 2 602 350 115 0 0 chr2RHet 2300441 2300493 -988268 + DMCR1A LINE CR1 2237 2288 -2182 2 602 1808 164 60 11 chr2RHet 2300489 2300870 -987891 + DMCR1A LINE CR1 2732 3131 -1339 2 602 27 0 0 0 chr2RHet 2300944 2300971 -987790 + AT_rich Low_complexity Low_complexity 1 27 0 2 602 32 95 0 0 chr2RHet 2301289 2301384 -987377 + AT_rich Low_complexity Low_complexity 1 95 0 2 602 1534 100 216 28 chr2RHet 2301742 2302215 -986546 + DNAREP1_DM LINE Penelope 30 591 -3 2 602 1271 204 143 11 chr2RHet 2302216 2302573 -986188 + DMCR1A LINE CR1 1368 1771 -2699 2 602 1447 109 58 15 chr2RHet 2302584 2302844 -985917 + DMCR1A LINE CR1 1814 2084 -2386 2 602 2070 151 67 12 chr2RHet 2302846 2303528 -985233 + DMCR1A LINE CR1 2529 3341 -1129 2 602 1907 135 91 39 chr2RHet 2303823 2304261 -984500 - DNAREP1_DM LINE Penelope -117 477 17 2 602 23 54 0 0 chr2RHet 2305330 2305367 -983394 + AT_rich Low_complexity Low_complexity 1 37 0 2 602 2362 98 16 45 chr2RHet 2305610 2306036 -982725 - DM297_LTR LTR Gypsy 0 414 1 2 602 4871 83 23 3 chr2RHet 2306036 2306811 -981950 - DM297_I LTR Gypsy 0 6167 5377 2 602 394 144 178 0 chr2RHet 2307677 2307767 -980994 + DMCR1A LINE CR1 7 112 -4358 2 602 11295 52 26 25 chr2RHet 2307774 2309434 -979327 - DOC5_DM LINE Jockey -230 4452 2790 2 602 350 21 21 0 chr2RHet 2309445 2309492 -979269 + ACCORD2_LTR LTR Gypsy 1 48 -167 2 602 240 62 0 0 chr2RHet 2309489 2309521 -979240 + ACCORD2_LTR LTR Gypsy 184 215 0 2 602 853 64 13 96 chr2RHet 2309521 2309677 -979084 + ACCORD2_I LTR Gypsy 1 143 -7069 2 602 5475 68 43 33 chr2RHet 2309676 2310536 -978225 - DOC5_DM LINE Jockey -1782 2900 2032 2 602 15038 37 20 3 chr2RHet 2310538 2312482 -976279 + DMCR1A LINE CR1 107 2083 -2387 2 602 3715 73 24 2 chr2RHet 2312479 2313011 -975750 + DMCR1A LINE CR1 2310 2853 -1617 2 602 6284 47 11 26 chr2RHet 2313014 2313883 -974878 + DMCR1A LINE CR1 3313 4168 -302 2 602 697 139 41 55 chr2RHet 2313889 2314034 -974727 + DMCR1A LINE CR1 4328 4470 0 2 602 29 70 0 0 chr2RHet 2315281 2315338 -973423 + AT_rich Low_complexity Low_complexity 1 57 0 2 602 48 43 0 0 chr2RHet 2315800 2315869 -972892 + AT_rich Low_complexity Low_complexity 1 69 0 2 602 1806 28 12 8 chr2RHet 2318289 2318537 -970224 - DMCR1A LINE CR1 -4221 249 1 2 602 22902 2 0 0 chr2RHet 2318841 2321493 -967268 + FW_DM LINE Jockey 3 2654 -2038 2 602 917 8 0 0 chr2RHet 2321593 2321710 -967051 + TABOR_LTR LTR Gypsy 390 506 0 2 602 280 140 0 0 chr2RHet 2322242 2322292 -966469 - DM297_LTR LTR Gypsy -364 50 1 2 602 4439 86 63 3 chr2RHet 2322292 2323038 -965723 - DM297_I LTR Gypsy 0 6167 5377 2 602 394 144 178 0 chr2RHet 2323905 2323995 -964766 + DMCR1A LINE CR1 7 112 -4358 2 602 11295 52 26 25 chr2RHet 2324002 2325662 -963099 - DOC5_DM LINE Jockey -230 4452 2790 2 602 350 21 21 0 chr2RHet 2325673 2325720 -963041 + ACCORD2_LTR LTR Gypsy 1 48 -167 2 602 240 62 0 0 chr2RHet 2325717 2325749 -963012 + ACCORD2_LTR LTR Gypsy 184 215 0 2 602 853 64 13 96 chr2RHet 2325749 2325905 -962856 + ACCORD2_I LTR Gypsy 1 143 -7069 2 602 5445 68 43 34 chr2RHet 2325904 2326765 -961996 - DOC5_DM LINE Jockey -1782 2900 2032 2 602 15320 34 18 4 chr2RHet 2326767 2328716 -960045 + DMCR1A LINE CR1 107 2083 -2387 2 602 3715 73 24 2 chr2RHet 2328713 2329245 -959516 + DMCR1A LINE CR1 2310 2853 -1617 2 602 4950 46 16 33 chr2RHet 2329248 2329946 -958815 + DMCR1A LINE CR1 3313 3998 -472 2 602 210 225 21 53 chr2RHet 2330092 2330186 -958575 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 2 602 22 0 0 0 chr2RHet 2330338 2330360 -958401 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 29225 1 0 0 chr2RHet 2330430 2333809 -954952 - DOC LINE Jockey 0 4725 1347 2 602 23 0 0 0 chr2RHet 2333814 2333837 -954924 + AT_rich Low_complexity Low_complexity 1 23 0 2 602 533 175 78 23 chr2RHet 2333912 2334041 -954720 - Invader2_LTR LTR Gypsy 0 266 131 2 602 308 83 42 0 chr2RHet 2334038 2334086 -954675 + BARI1 DNA Tc1 39 88 -1662 2 602 435 34 16 33 chr2RHet 2334114 2334175 -954586 - BARI1 DNA Tc1 -1651 99 40 2 602 668 174 30 8 chr2RHet 2334166 2334299 -954462 - Invader2_LTR LTR Gypsy -129 137 2 2 602 427 100 43 0 chr2RHet 2334300 2334370 -954391 - Invader2_I LTR Gypsy 0 4592 4520 2 602 8699 38 39 21 chr2RHet 2334370 2335469 -953292 - DMCR1A LINE CR1 0 4470 3352 2 602 42710 6 0 0 chr2RHet 2335475 2340167 -948594 - FW_DM LINE Jockey 0 4692 1 2 602 346 149 45 0 chr2RHet 2340161 2340228 -948533 - DMCR1A LINE CR1 -1097 3373 3304 2 602 22895 33 40 4 chr2RHet 2340225 2342981 -945780 - DMCR1A LINE CR1 -1617 2853 1 2 602 1206 117 46 0 chr2RHet 2342987 2343183 -945578 - Invader2_I LTR Gypsy -101 4491 4287 2 602 48 18 0 0 chr2RHet 2343597 2343652 -945109 + AT_rich Low_complexity Low_complexity 1 55 0 2 602 6932 82 89 9 chr2RHet 2343652 2345288 -943473 - Invader2_I LTR Gypsy -300 4292 2526 2 602 9906 127 108 54 chr2RHet 2345285 2347285 -941476 - Invader2_I LTR Gypsy -2269 2323 155 2 602 3239 0 0 0 chr2RHet 2347308 2347654 -941107 + Invader4_LTR LTR Gypsy 1 346 0 2 602 241 263 0 0 chr2RHet 2348276 2348333 -940428 + Gypsy_DS LTR Gypsy 3092 3148 -4374 2 602 21 0 0 0 chr2RHet 2348426 2348447 -940314 + AT_rich Low_complexity Low_complexity 1 21 0 2 602 373 202 130 9 chr2RHet 2349337 2349452 -939309 - DNAREP1_DM LINE Penelope -463 131 3 2 602 1422 143 190 166 chr2RHet 2349508 2350087 -938674 - DNAREP1_DM LINE Penelope 0 594 2 2 602 23 78 0 0 chr2RHet 2350140 2350191 -938570 + AT_rich Low_complexity Low_complexity 1 51 0 2 602 2531 21 3 0 chr2RHet 2350227 2350513 -938248 - Gypsy4_LTR LTR Gypsy 0 287 1 2 602 1463 212 81 17 chr2RHet 2350513 2350858 -937903 - DMCR1A LINE CR1 -3271 1199 833 2 602 757 314 48 45 chr2RHet 2350825 2351225 -937536 - Gypsy8_I LTR Gypsy -2877 1470 1070 2 602 619 363 11 11 chr2RHet 2351379 2351758 -937003 - OSVALDO_I LTR Gypsy -4115 2538 2160 2 602 1203 243 6 32 chr2RHet 2352444 2352759 -936002 + Gypsy_LTR LTR Gypsy 4 310 -172 2 602 744 98 181 0 chr2RHet 2352964 2353097 -935664 + DNAREP1_DM LINE Penelope 24 180 -414 2 602 602 283 11 11 chr2RHet 2353425 2353607 -935154 - Gypsy12_I LTR Gypsy -1882 3664 3483 2 602 320 325 62 0 chr2RHet 2353625 2353785 -934976 - Gypsy12_I LTR Gypsy -4006 1540 1371 2 602 612 350 41 43 chr2RHet 2354550 2355010 -933751 - DIVER_I LTR Pao -4100 1543 1085 2 602 383 333 22 26 chr2RHet 2355433 2355661 -933100 - Gypsy5_I LTR Gypsy -1919 4590 4364 2 602 303 297 31 31 chr2RHet 2355675 2355838 -932923 - ZAM_I LTR Gypsy -2196 5294 5132 2 602 310 275 0 0 chr2RHet 2355926 2356006 -932755 - ACCORD2_I LTR Gypsy -1334 5878 5799 2 602 26 0 0 0 chr2RHet 2357187 2357213 -931548 + AT_rich Low_complexity Low_complexity 1 26 0 2 602 402 302 0 0 chr2RHet 2357288 2357414 -931347 - Gypsy12_I LTR Gypsy -4006 1540 1415 2 602 302 140 0 0 chr2RHet 2358077 2358127 -930634 - DM297_LTR LTR Gypsy -364 50 1 2 75 8349 132 68 35 chr2RHet 2358127 2359843 -928918 - DM297_I LTR Gypsy 0 6167 4396 2 603 3825 25 32 70 chr2RHet 2360066 2360593 -928168 - DM176_LTR LTR Gypsy 0 507 1 2 603 359 217 0 0 chr2RHet 2362231 2362300 -926461 + NOMAD_I LTR Gypsy 5934 6002 -570 2 603 681 52 103 0 chr2RHet 2362644 2362741 -926020 + Gypsy2_LTR LTR Gypsy 1 107 -246 2 603 16068 101 10 9 chr2RHet 2362751 2366928 -921833 + Gypsy2_I LTR Gypsy 1 4218 -2794 2 603 26153 38 26 29 chr2RHet 2366922 2370202 -918559 + Gypsy2_I LTR Gypsy 2858 6126 -9 2 603 3242 11 0 0 chr2RHet 2370203 2370556 -918205 + Gypsy2_LTR LTR Gypsy 1 353 0 2 603 762 324 50 65 chr2RHet 2370653 2371178 -917583 + NOMAD_I LTR Gypsy 6053 6569 -3 2 603 944 334 135 23 chr2RHet 2371453 2372152 -916609 + NINJA_I LTR Pao 1069 1845 -4166 2 603 1879 304 53 23 chr2RHet 2372342 2373159 -915602 + NINJA_I LTR Pao 2066 2906 -3105 2 603 5994 308 24 15 chr2RHet 2373179 2375543 -913218 + NINJA_I LTR Pao 3626 6011 0 2 603 323 172 31 0 chr2RHet 2376004 2376068 -912693 + DMCR1A LINE CR1 361 426 -4044 2 603 390 326 96 58 chr2RHet 2376068 2376570 -912191 + DIVER2_I LTR Pao 2453 2973 -1174 2 603 332 244 0 9 chr2RHet 2376886 2377002 -911759 + DMCR1A LINE CR1 86 200 -4270 2 603 915 163 45 20 chr2RHet 2377007 2377326 -911435 + DNAREP1_DM LINE Penelope 89 363 -231 2 603 2320 164 47 5 chr2RHet 2377371 2377795 -910966 + DMCR1A LINE CR1 941 1382 -3088 2 603 1873 178 118 6 chr2RHet 2377820 2378355 -910406 + DMCR1A LINE CR1 1695 2391 -2079 2 603 23 33 0 0 chr2RHet 2378394 2378424 -910337 + AT_rich Low_complexity Low_complexity 1 30 0 2 603 284 325 16 24 chr2RHet 2378437 2378563 -910198 + Gypsy_I LTR Gypsy 3150 3274 -3233 2 603 25 31 0 0 chr2RHet 2379310 2379342 -909419 + AT_rich Low_complexity Low_complexity 1 32 0 2 603 288 241 56 35 chr2RHet 2379384 2379526 -909235 + P_DG DNA P 2741 2885 -3 2 603 1679 110 59 0 chr2RHet 2379399 2379654 -909107 - DNAREP1_DM LINE Penelope 0 594 325 2 603 182 118 29 0 chr2RHet 2379664 2379698 -909063 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2 603 37 39 0 0 chr2RHet 2381027 2381078 -907683 + AT_rich Low_complexity Low_complexity 1 51 0 2 603 47 0 0 0 chr2RHet 2381745 2381792 -906969 + AT_rich Low_complexity Low_complexity 1 47 0 2 603 987 239 64 11 chr2RHet 2385166 2385449 -903312 - FW_DM LINE Jockey -2177 2515 2218 2 603 457 276 105 85 chr2RHet 2385539 2385891 -902870 - DOC2_DM LINE Jockey -4187 606 248 2 603 794 273 175 48 chr2RHet 2386065 2386920 -901841 - STALKER4_I LTR Gypsy -3520 3010 2047 2 603 1906 122 13 31 chr2RHet 2386929 2387351 -901410 - DNAREP1_DM LINE Penelope -124 470 1 2 603 21 0 0 0 chr2RHet 2388329 2388350 -900411 + AT_rich Low_complexity Low_complexity 1 21 0 2 603 24 53 0 0 chr2RHet 2388500 2388538 -900223 + AT_rich Low_complexity Low_complexity 1 38 0 2 603 3719 20 50 9 chr2RHet 2388687 2389151 -899610 + FB4_DM DNA Tc1 3607 4089 0 2 603 453 281 55 0 chr2RHet 2389309 2389455 -899306 - STALKER4_I LTR Gypsy -4564 1966 1813 2 603 1750 52 118 0 chr2RHet 2390253 2390589 -898172 - DMTOM1_LTR LTR Gypsy 0 410 1 2 603 1525 121 214 15 chr2RHet 2390708 2391095 -897666 - DNAREP1_DM LINE Penelope -127 467 4 2 603 2162 117 49 5 chr2RHet 2391454 2391824 -896937 - PROTOP_A DNA P -34 1071 686 2 603 523 89 154 11 chr2RHet 2391832 2391923 -896838 - PROTOP_A DNA P -1001 104 1 2 603 621 346 76 55 chr2RHet 2395054 2397458 -891303 + Invader3_I LTR Gypsy 2039 4480 -1 2 603 1412 83 12 13 chr2RHet 2398183 2398390 -890371 + G3_DM LINE Jockey 4418 4583 -22 2 603 216 86 0 0 chr2RHet 2398420 2398455 -890306 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 603 625 346 76 55 chr2RHet 2401638 2404042 -884719 + Invader3_I LTR Gypsy 2039 4480 -1 2 603 1412 83 12 13 chr2RHet 2404767 2404974 -883787 + G3_DM LINE Jockey 4418 4583 -22 2 603 297 68 0 0 chr2RHet 2405004 2405048 -883713 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2 603 7574 43 78 10 chr2RHet 2408042 2409361 -879400 + FW_DM LINE Jockey 5 1498 -3194 2 603 1962 0 0 18 chr2RHet 2409361 2409580 -879181 - ACCORD2_LTR LTR Gypsy 0 215 1 2 603 31662 56 28 3 chr2RHet 2409589 2413892 -874869 - ACCORD2_I LTR Gypsy 0 7212 1582 2 603 16895 33 64 22 chr2RHet 2413942 2416160 -872601 - ACCORD2_I LTR Gypsy -4901 2311 1 2 603 1921 9 0 18 chr2RHet 2416160 2416379 -872382 - ACCORD2_LTR LTR Gypsy 0 215 1 2 603 6206 10 6 0 chr2RHet 2416379 2417076 -871685 + FW_DM LINE Jockey 1495 2195 -2497 2 603 2142 4 0 0 chr2RHet 2417076 2417316 -871445 + FW_DM LINE Jockey 2612 2851 -1841 2 603 10178 1 12 0 chr2RHet 2417315 2418435 -870326 - G2_DM LINE Jockey -1 3101 1969 2 603 16449 17 1 0 chr2RHet 2418434 2420286 -868475 + FW_DM LINE Jockey 2840 4692 0 2 603 7142 36 18 40 chr2RHet 2420285 2421230 -867531 + DOC2_DM LINE Jockey 529 1452 -3341 2 603 3997 5 0 0 chr2RHet 2421248 2421678 -867083 + DMRT1A LINE R1 1 430 -4753 2 603 11386 17 1 0 chr2RHet 2421778 2423058 -865703 + FW_DM LINE Jockey 3411 4691 -1 2 603 7151 35 18 40 chr2RHet 2423057 2424002 -864759 + DOC2_DM LINE Jockey 529 1452 -3341 2 603 4046 5 0 0 chr2RHet 2424020 2424455 -864306 + DMRT1A LINE R1 1 435 -4748 2 603 9915 11 40 0 chr2RHet 2432458 2433593 -855168 + DOC2_DM LINE Jockey 1559 2739 -2054 2 603 11185 15 2 0 chr2RHet 2433581 2434830 -853931 + DOC2_DM LINE Jockey 3543 4793 0 2 603 212 59 29 0 chr2RHet 2434985 2435019 -853742 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 603 2560 38 3 28 chr2RHet 2435196 2435520 -853241 - NINJA_LTR LTR Pao -1 316 1 2 603 17162 26 1 1 chr2RHet 2435520 2437533 -851228 - NINJA_I LTR Pao 0 6011 3999 2 603 23281 29 1 19 chr2RHet 2437510 2440371 -848390 - NINJA_I LTR Pao -3164 2847 36 2 603 2586 35 3 28 chr2RHet 2440377 2440702 -848059 - NINJA_LTR LTR Pao 0 317 1 2 603 481 308 70 72 chr2RHet 2440702 2441377 -847384 + Invader3_I LTR Gypsy 2225 3029 -1859 2 603 9077 23 27 11 chr2RHet 2441509 2442597 -846164 + PROTOP_A DNA P 1 1105 0 2 603 396 296 19 19 chr2RHet 2442616 2442778 -845983 + MDG3_I LTR Gypsy 3263 3424 -1562 2 603 374 336 72 56 chr2RHet 2443084 2444030 -844731 + MDG3_I LTR Gypsy 3541 4480 -1 2 603 376 287 150 49 chr2RHet 2444583 2445254 -843507 + DOC LINE Jockey 648 1382 -3358 2 603 567 313 21 11 chr2RHet 2445520 2445807 -842954 + FW2_DM LINE Jockey 1107 1371 -2590 2 603 845 261 35 22 chr2RHet 2445815 2446109 -842652 + FW2_DM LINE Jockey 1230 1752 -2209 2 603 31 26 0 0 chr2RHet 2446284 2446322 -842439 + AT_rich Low_complexity Low_complexity 1 38 0 2 603 538 340 28 4 chr2RHet 2446538 2446789 -841972 + Invader4_I LTR Gypsy 145 401 -2012 2 603 1894 118 187 20 chr2RHet 2448034 2448541 -840220 - DNAREP1_DM LINE Penelope 0 594 90 2 603 3190 89 16 2 chr2RHet 2448525 2448544 -840217 - I_DM LINE I -751 5480 5461 2 603 198 0 0 0 chr2RHet 2448544 2448566 -840195 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2 603 3190 89 16 2 chr2RHet 2448566 2449044 -839717 - I_DM LINE I -771 5460 4977 2 603 1149 70 19 0 chr2RHet 2449049 2449206 -839555 - I_DM LINE I -1502 4729 4570 2 603 3008 89 18 0 chr2RHet 2449550 2450001 -838760 - I_DM LINE I -1653 4578 4120 2 603 9423 141 72 53 chr2RHet 2450000 2453509 -835252 - I_DM LINE I -2496 3735 100 2 603 237 115 0 55 chr2RHet 2453509 2453564 -835197 - DNAREP1_DM LINE Penelope -340 254 203 2 603 35 54 0 0 chr2RHet 2453578 2453634 -835127 + AT_rich Low_complexity Low_complexity 1 56 0 2 603 364 281 12 35 chr2RHet 2453683 2453853 -834908 - MDG1_I LTR Gypsy -931 5665 5500 2 603 664 253 291 10 chr2RHet 2453847 2454238 -834523 - MDG1_I LTR Gypsy -971 5625 5125 2 603 36 70 0 0 chr2RHet 2454778 2454849 -833912 + AT_rich Low_complexity Low_complexity 1 71 0 2 603 22 22 0 62 chr2RHet 2455274 2455322 -833439 + AT_rich Low_complexity Low_complexity 1 45 0 2 603 3290 52 1 14 chr2RHet 2456505 2456944 -831817 + STALKER4_LTR LTR Gypsy 1 399 -3 2 603 28 48 0 0 chr2RHet 2457032 2457074 -831687 + AT_rich Low_complexity Low_complexity 1 42 0 2 603 2657 144 84 36 chr2RHet 2457081 2457865 -830896 + STALKER4_I LTR Gypsy 291 1163 -5367 2 603 6574 5 0 3 chr2RHet 2457863 2458624 -830137 + STALKER4_I LTR Gypsy 1271 2029 -4501 2 603 533 16 0 0 chr2RHet 2458622 2458684 -830077 + STALKER4_I LTR Gypsy 2332 2393 -4137 2 604 25461 13 6 0 chr2RHet 2558684 2561649 -727112 + Invader2_I LTR Gypsy 290 3271 -1321 2 604 18089 34 31 8 chr2RHet 2566649 2568876 -719885 - DMCR1A LINE CR1 -2190 2280 1 2 604 3186 79 17 2 chr2RHet 2568923 2569405 -719356 - I_DM LINE I -767 5464 4976 2 604 1149 70 19 0 chr2RHet 2569410 2569567 -719194 - I_DM LINE I -1502 4729 4570 2 604 253 304 86 25 chr2RHet 2574531 2574693 -714068 + I_DM LINE I 3087 3258 -2973 2 604 198 0 0 0 chr2RHet 2575009 2575031 -713730 + (CTAAA)n Simple_repeat Simple_repeat 2 23 0 2 604 4285 12 0 0 chr2RHet 2576016 2576497 -712264 - T412LTR LTR LTR 0 481 1 2 604 60339 1 2 10 chr2RHet 2576387 2583339 -705422 - DM412 LTR Gypsy 0 6897 1 2 604 4285 12 0 0 chr2RHet 2583025 2583506 -705255 - T412LTR LTR LTR 0 481 1 2 604 59 0 0 0 chr2RHet 2586678 2586737 -702024 + AT_rich Low_complexity Low_complexity 1 59 0 2 604 956 192 0 0 chr2RHet 2587535 2587721 -701040 - MDG1_I LTR Gypsy -4119 2477 2292 2 604 1317 126 25 127 chr2RHet 2587721 2588048 -700713 + DM176_LTR LTR Gypsy 1 367 -140 2 604 1667 30 0 0 chr2RHet 2588399 2588601 -700160 + ROOA_I LTR Pao 354 555 -6294 2 604 1473 34 0 0 chr2RHet 2588614 2588790 -699971 + ROOA_LTR LTR Pao 211 386 0 2 604 555 117 42 21 chr2RHet 2588790 2588885 -699876 + DM176_I LTR Gypsy 2539 2635 -3785 2 604 2058 50 43 0 chr2RHet 2589689 2589968 -698793 - DMCR1A LINE CR1 0 4470 4180 2 604 17324 44 68 11 chr2RHet 2589971 2592409 -696352 - DMCR1A LINE CR1 -698 3772 1196 2 604 2503 24 0 0 chr2RHet 2592409 2592696 -696065 - Gypsy4_LTR LTR Gypsy 0 287 1 2 604 52038 14 21 4 chr2RHet 2592696 2598738 -690023 - Gypsy4_I LTR Gypsy 0 6288 145 2 604 1502 34 0 0 chr2RHet 2598731 2598910 -689851 - DMCR1A LINE CR1 -3492 978 800 2 604 2750 28 29 115 chr2RHet 2598908 2599353 -689408 - DMCR1A LINE CR1 -4063 407 1 2 604 1727 97 0 4 chr2RHet 2599354 2599602 -689159 - MDG1_LTR LTR Gypsy -30 412 166 2 604 25611 31 0 0 chr2RHet 2600202 2603260 -685501 - MDG1_I LTR Gypsy -1495 5101 2044 2 604 5288 8 0 0 chr2RHet 2608260 2608882 -679879 + Invader2_I LTR Gypsy 3752 4373 -219 2 604 1353 7 0 0 chr2RHet 2608883 2609034 -679727 + Invader2_LTR LTR Gypsy 116 266 0 2 604 3127 68 15 7 chr2RHet 2609099 2609558 -679203 - MDG1_I LTR Gypsy -5462 1134 672 2 604 2265 95 34 11 chr2RHet 2609555 2609908 -678853 - MDG1_I LTR Gypsy -6235 361 1 2 604 1924 101 14 3 chr2RHet 2609908 2610195 -678566 - MDG1_LTR LTR Gypsy -30 412 123 2 604 383 68 17 0 chr2RHet 2610207 2610266 -678495 + (TTA)n Simple_repeat Simple_repeat 3 62 0 2 604 2948 41 324 29 chr2RHet 2610282 2610841 -677920 - MDG1_I LTR Gypsy 0 6596 5873 2 604 209 184 0 0 chr2RHet 2610941 2610979 -677782 + (AATAG)n Simple_repeat Simple_repeat 2 39 0 2 604 914 0 0 0 chr2RHet 2610989 2611093 -677668 - ROO_LTR LTR Pao -324 104 1 2 604 7400 24 28 5 chr2RHet 2611093 2612017 -676744 - ROO_I LTR Pao 0 8256 7312 2 604 53029 17 25 6 chr2RHet 2611996 2618382 -670379 - ROO_I LTR Pao -1751 6505 1 2 604 3530 17 39 0 chr2RHet 2618382 2618794 -669967 - ROO_LTR LTR Pao 0 428 1 2 604 7457 45 12 0 chr2RHet 2618794 2619713 -669048 - DMCR1A LINE CR1 -217 4253 3324 2 604 1616 137 101 59 chr2RHet 2619776 2620134 -668627 - STALKER4_LTR LTR Gypsy -29 373 1 2 75 46026 77 18 7 chr2RHet 2620134 2626569 -662192 - STALKER4_I LTR Gypsy 0 6530 22 2 605 1681 131 101 59 chr2RHet 2626626 2626984 -661777 - STALKER4_LTR LTR Gypsy -29 373 1 2 605 1879 30 0 13 chr2RHet 2626984 2627217 -661544 - DMCR1A LINE CR1 -1143 3327 3098 2 605 405 321 31 31 chr2RHet 2627265 2627426 -661335 + Gypsy6_I LTR Gypsy 6852 7012 0 2 605 2983 61 71 0 chr2RHet 2627428 2627820 -660941 + Gypsy6A_LTR LTR Gypsy 1 420 0 2 605 32 67 0 0 chr2RHet 2627843 2627903 -660858 + AT_rich Low_complexity Low_complexity 1 60 0 2 605 276 188 0 0 chr2RHet 2627997 2628061 -660700 + MDG1_I LTR Gypsy 6171 6234 -362 2 605 244 185 75 21 chr2RHet 2628096 2628190 -660571 + DM412 LTR Gypsy 6696 6794 -103 2 605 1656 153 56 85 chr2RHet 2628705 2629083 -659678 - MICROPIA_LTR LTR Gypsy 0 476 110 2 605 669 215 161 50 chr2RHet 2629150 2629473 -659288 + Gypsy_LTR LTR Gypsy 104 462 -20 2 605 20960 171 102 13 chr2RHet 2629749 2633778 -654983 + Gypsy_I LTR Gypsy 265 4650 -1857 2 605 8894 192 43 0 chr2RHet 2633779 2635446 -653315 + Gypsy_I LTR Gypsy 4769 6506 -1 2 605 409 295 16 8 chr2RHet 2635480 2635603 -653158 + Gypsy_LTR LTR Gypsy 29 152 -330 2 605 334 153 56 0 chr2RHet 2635613 2635685 -653076 + PROTOP DNA P 809 884 -3596 2 605 2487 7 42 0 chr2RHet 2635875 2636161 -652600 - Invader3_LTR LTR Gypsy 0 298 1 2 605 43072 7 9 0 chr2RHet 2636161 2641003 -647758 - Invader3_I LTR Gypsy 0 4888 1 2 605 2290 25 57 0 chr2RHet 2641005 2641285 -647476 - Invader3_LTR LTR Gypsy -2 296 1 2 605 2794 44 13 47 chr2RHet 2641383 2641768 -646993 + Stalker3_LTR LTR Gypsy 1 372 0 2 605 306 105 0 50 chr2RHet 2641768 2641828 -646933 + Stalker2_I LTR Gypsy 1 57 -7345 2 605 946 151 43 0 chr2RHet 2642023 2642209 -646552 + Stalker2_I LTR Gypsy 242 435 -6967 2 605 1248 136 31 27 chr2RHet 2642221 2642479 -646282 + Stalker2_I LTR Gypsy 624 882 -6520 2 605 1645 318 49 44 chr2RHet 2642987 2644875 -643886 + MDG1_I LTR Gypsy 1456 3347 -3266 2 605 1053 219 109 3 chr2RHet 2644932 2645200 -643561 + Gypsy_I LTR Gypsy 6246 6504 -3 2 605 361 260 21 10 chr2RHet 2645200 2645296 -643465 + Gypsy_LTR LTR Gypsy 30 126 -356 2 605 355 139 56 0 chr2RHet 2645312 2645384 -643377 + PROTOP DNA P 809 884 -3596 2 605 2794 44 13 47 chr2RHet 2645668 2646053 -642708 + Stalker3_LTR LTR Gypsy 1 372 0 2 605 306 105 0 50 chr2RHet 2646053 2646113 -642648 + Stalker2_I LTR Gypsy 1 57 -7345 2 605 946 151 43 0 chr2RHet 2646308 2646494 -642267 + Stalker2_I LTR Gypsy 242 435 -6967 2 605 1248 136 31 27 chr2RHet 2646506 2646764 -641997 + Stalker2_I LTR Gypsy 624 882 -6520 2 605 1748 318 43 43 chr2RHet 2647271 2649146 -639615 + MDG1_I LTR Gypsy 1456 3327 -3286 2 605 5901 3 0 0 chr2RHet 2649148 2649806 -638955 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 605 18153 6 6 0 chr2RHet 2649806 2651982 -636779 - QUASIMODO_I LTR Gypsy 0 6060 3872 2 606 4237 301 64 32 chr2RHet 2762183 2764490 -524271 - MICROPIA_I LTR Gypsy -682 3794 1414 2 606 876 71 79 0 chr2RHet 2764488 2764614 -524147 + Gypsy7_I LTR Gypsy 3199 3334 -1650 2 606 2328 35 10 0 chr2RHet 2764615 2764905 -523856 + Gypsy7_I LTR Gypsy 3615 3907 -1077 2 606 1494 154 14 21 chr2RHet 2765023 2765308 -523453 + PROTOP_B DNA P 867 1149 -4 2 606 252 119 24 0 chr2RHet 2765839 2765881 -522880 + PROTOP DNA P 873 915 -3565 2 606 532 178 339 0 chr2RHet 2765880 2766121 -522640 + PROTOP DNA P 3959 4280 -200 2 606 358 299 101 9 chr2RHet 2766230 2766443 -522318 - MICROPIA_I LTR Gypsy -626 3850 3434 2 606 408 307 0 0 chr2RHet 2766529 2766656 -522105 - MICROPIA_I LTR Gypsy -682 3794 3668 2 606 4205 304 37 32 chr2RHet 2766703 2768597 -520164 - MICROPIA_I LTR Gypsy -1159 3317 1414 2 606 876 71 79 0 chr2RHet 2768595 2768721 -520040 + Gypsy7_I LTR Gypsy 3199 3334 -1650 2 606 2328 35 10 0 chr2RHet 2768722 2769012 -519749 + Gypsy7_I LTR Gypsy 3615 3907 -1077 2 606 1470 158 14 21 chr2RHet 2769130 2769415 -519346 + PROTOP_B DNA P 867 1149 -4 2 606 252 119 24 0 chr2RHet 2769946 2769988 -518773 + PROTOP DNA P 873 915 -3565 2 606 507 183 345 0 chr2RHet 2769987 2770227 -518534 + PROTOP DNA P 3959 4280 -200 2 606 371 299 118 9 chr2RHet 2770336 2770549 -518212 - MICROPIA_I LTR Gypsy -626 3850 3668 2 606 4836 308 105 33 chr2RHet 2770635 2773775 -514986 - MICROPIA_I LTR Gypsy -682 3794 431 2 606 231 294 57 40 chr2RHet 2773769 2773893 -514868 - MICROPIA_I LTR Gypsy -4350 126 1 2 606 2283 143 24 28 chr2RHet 2773893 2774318 -514443 - Invader1_LTR LTR Gypsy 0 423 1 2 606 586 189 183 0 chr2RHet 2774380 2774544 -514217 + PROTOP DNA P 722 915 -3565 2 606 1047 178 92 14 chr2RHet 2774543 2774912 -513849 + PROTOP_A DNA P 694 1013 -92 2 606 33 56 0 0 chr2RHet 2775439 2775493 -513268 + AT_rich Low_complexity Low_complexity 1 54 0 2 606 1430 66 25 0 chr2RHet 2776980 2777177 -511584 - Jockey2 LINE Jockey -44 3384 3183 2 606 26 30 0 0 chr2RHet 2777231 2777264 -511497 + AT_rich Low_complexity Low_complexity 1 33 0 2 606 1847 179 86 107 chr2RHet 2777264 2777870 -510891 - DNAREP1_DM LINE Penelope -1 593 1 2 606 21 0 0 0 chr2RHet 2777953 2777974 -510787 + AT_rich Low_complexity Low_complexity 1 21 0 2 606 3766 50 4 0 chr2RHet 2778045 2778545 -510216 - Jockey2 LINE Jockey -18 3410 2909 2 606 4623 58 32 0 chr2RHet 2778534 2779151 -509610 - Jockey2 LINE Jockey -635 2793 2157 2 606 4801 28 139 0 chr2RHet 2779150 2779834 -508927 - FB4_DM DNA Tc1 -3310 779 1 2 606 880 213 28 7 chr2RHet 2779859 2780209 -508552 - Jockey2 LINE Jockey -2112 1316 1187 2 606 1098 198 101 73 chr2RHet 2780366 2780803 -507958 - DNAREP1_DM LINE Penelope -18 576 128 2 606 25 0 0 0 chr2RHet 2781965 2781990 -506771 + AT_rich Low_complexity Low_complexity 1 25 0 2 606 656 103 446 0 chr2RHet 2782042 2782208 -506553 - DNAREP1_DM LINE Penelope -10 584 345 2 606 1158 185 17 17 chr2RHet 2782222 2782513 -506248 - DNAREP1_DM LINE Penelope -303 291 1 2 606 459 115 11 0 chr2RHet 2782551 2782638 -506123 - DM176_I LTR Gypsy -1557 4863 4776 2 606 724 175 53 94 chr2RHet 2783625 2783895 -504866 + FW3_DM LINE Jockey 2 232 -2900 2 606 6039 73 47 6 chr2RHet 2783894 2784801 -503960 - TRANSIB2 DNA Transib -1761 1083 139 2 606 2815 128 48 85 chr2RHet 2784788 2785503 -503258 + PROTOP DNA P 17 707 -3773 2 606 287 115 197 0 chr2RHet 2785504 2785565 -503196 + PROTOP DNA P 1009 1081 -3399 2 606 988 109 67 44 chr2RHet 2785558 2785803 -502958 + PROTOP DNA P 3918 4117 -363 2 606 1141 79 82 18 chr2RHet 2785812 2786029 -502732 - PROTOP_A DNA P -211 894 690 2 606 445 47 31 0 chr2RHet 2786029 2786093 -502668 + TC1_DM DNA Tc1 1 66 -1600 2 606 9252 29 18 2 chr2RHet 2786099 2787267 -501494 - DOC LINE Jockey 0 4740 3554 2 606 20027 38 22 3 chr2RHet 2787277 2790231 -498530 - DOC LINE Jockey 0 4725 165 2 606 36243 3 1 3 chr2RHet 2790240 2794474 -494287 - DOC LINE Jockey -470 4255 32 2 606 1304 58 5 10 chr2RHet 2794496 2794689 -494072 - DOC3_DM LINE Jockey -4526 214 23 2 606 1922 37 0 24 chr2RHet 2794760 2795011 -493750 - DMCR1A LINE CR1 -2284 2186 1942 2 606 445 286 145 23 chr2RHet 2795013 2795400 -493361 - MDG1_I LTR Gypsy -4859 1737 1304 2 606 4381 113 18 7 chr2RHet 2795775 2796487 -492274 - IVK_DM LINE I -4 5398 4679 2 606 1642 142 57 0 chr2RHet 2796499 2796795 -491966 - IVK_DM LINE I -778 4624 4312 2 606 306 87 0 0 chr2RHet 2796793 2796839 -491922 - IVK_DM LINE I -1244 4158 4113 2 606 2416 108 129 12 chr2RHet 2796837 2797394 -491367 - IVK_DM LINE I -1530 3872 3251 2 606 2641 74 116 12 chr2RHet 2797372 2797796 -490965 + PROTOP DNA P 35 502 -3978 2 606 1309 142 89 15 chr2RHet 2797816 2798087 -490674 + IVK_DM LINE I 2549 2839 -2563 2 606 391 108 15 0 chr2RHet 2798126 2798190 -490571 + IVK_DM LINE I 2925 2989 -2413 2 606 2972 50 20 24 chr2RHet 2798190 2798712 -490049 - PROTOP_A DNA P 0 1153 622 2 606 3532 19 2 0 chr2RHet 2798718 2799147 -489614 - PROTOP_A DNA P -675 430 1 2 606 496 169 0 0 chr2RHet 2799151 2799240 -489521 - DNAREP1_DM LINE Penelope -505 89 1 2 606 203 175 0 73 chr2RHet 2799241 2799309 -489452 + T-rich Low_complexity Low_complexity 2 64 0 2 606 492 151 11 0 chr2RHet 2799570 2799663 -489098 - DM176_LTR LTR Gypsy -283 224 131 2 606 988 197 221 43 chr2RHet 2800850 2801385 -487376 - FB4_DM DNA Tc1 0 4089 3460 2 606 3466 149 133 68 chr2RHet 2801436 2802519 -486242 - PROTOP_B DNA P 0 1153 1 2 606 272 131 43 14 chr2RHet 2802609 2802679 -486082 - DNAREP1_DM LINE Penelope -306 288 217 2 606 661 200 0 0 chr2RHet 2802696 2802846 -485915 - DNAREP1_DM LINE Penelope -287 307 158 2 606 40841 2 0 0 chr2RHet 2802971 2807695 -481066 - DOC LINE Jockey 0 4725 2 2 606 463 83 389 0 chr2RHet 2809258 2809382 -479379 - FW3_DM LINE Jockey -8 3124 2953 2 606 2243 197 110 19 chr2RHet 2809379 2809963 -478798 - FW3_DM LINE Jockey -577 2555 1919 2 606 502 138 492 18 chr2RHet 2810001 2810281 -478480 - DMRT1B LINE R1 -19 5164 4714 2 606 5586 137 92 9 chr2RHet 2810274 2811312 -477449 - DMRT1B LINE R1 -1085 4098 2974 2 606 2054 134 23 6 chr2RHet 2811317 2811663 -477098 - DMRT1B LINE R1 -2492 2691 2340 2 606 1048 171 384 0 chr2RHet 2811659 2812087 -476674 - DMRT1B LINE R1 -4002 1181 590 2 606 1027 183 120 26 chr2RHet 2812094 2812403 -476358 - FW3_DM LINE Jockey -1907 1225 888 2 606 244 114 23 0 chr2RHet 2813249 2813293 -475468 - Gypsy8_I LTR Gypsy -4302 45 1 2 606 265 246 90 74 chr2RHet 2813316 2813505 -475256 - Gypsy8_LTR LTR Gypsy -112 192 1 2 606 844 123 166 11 chr2RHet 2813908 2814089 -474672 + DNAREP1_DM LINE Penelope 2 210 -384 2 606 22 103 0 0 chr2RHet 2821181 2821259 -467502 + AT_rich Low_complexity Low_complexity 1 78 0 2 606 1426 145 141 3 chr2RHet 2821363 2821667 -467094 - DMCR1A LINE CR1 -1044 3426 3081 2 606 974 168 102 15 chr2RHet 2821754 2821959 -466802 + DMLTR5 LTR Gypsy 40 262 -4 2 606 1823 124 161 81 chr2RHet 2821960 2822494 -466267 + HMSBEAGLE_I LTR Gypsy 2 578 -5951 2 606 2241 114 72 20 chr2RHet 2822566 2822967 -465794 - Invader1_LTR LTR Gypsy 0 423 2 2 606 7215 97 67 48 chr2RHet 2822968 2824232 -464529 - Invader1_I LTR Gypsy 0 3186 1898 2 606 4819 47 103 28 chr2RHet 2824232 2825086 -463675 + PROTOP_B DNA P 1 936 -217 2 606 286 50 0 0 chr2RHet 2825079 2825139 -463622 + PROTOP_B DNA P 572 631 -522 2 606 2261 61 13 0 chr2RHet 2825144 2825457 -463304 + PROTOP_B DNA P 794 1110 -43 2 606 982 140 190 0 chr2RHet 2825454 2825675 -463086 - DMCR1A LINE CR1 -1125 3345 3083 2 606 997 163 102 15 chr2RHet 2825766 2825971 -462790 + DMLTR5 LTR Gypsy 40 262 -4 2 606 1028 109 43 21 chr2RHet 2825972 2826159 -462602 + HMSBEAGLE_I LTR Gypsy 2 192 -6337 2 606 255 203 108 0 chr2RHet 2826207 2826281 -462480 + HMSBEAGLE_I LTR Gypsy 497 578 -5951 2 606 2332 119 44 19 chr2RHet 2826353 2826765 -461996 - Invader1_LTR LTR Gypsy 0 423 2 2 606 7464 94 57 47 chr2RHet 2826766 2828042 -460719 - Invader1_I LTR Gypsy 0 3186 1898 2 606 5599 57 68 34 chr2RHet 2828042 2828947 -459814 + PROTOP_B DNA P 1 936 -217 2 606 286 50 0 0 chr2RHet 2828940 2829000 -459761 + PROTOP_B DNA P 572 631 -522 2 606 2207 61 12 19 chr2RHet 2829005 2829324 -459437 + PROTOP_B DNA P 794 1110 -43 2 606 982 140 190 0 chr2RHet 2829321 2829542 -459219 - DMCR1A LINE CR1 -1125 3345 3083 2 606 997 163 102 15 chr2RHet 2829633 2829838 -458923 + DMLTR5 LTR Gypsy 40 262 -4 2 606 2304 120 90 76 chr2RHet 2829839 2830408 -458353 + HMSBEAGLE_I LTR Gypsy 2 578 -5951 2 606 2232 112 72 20 chr2RHet 2830480 2830881 -457880 - Invader1_LTR LTR Gypsy 0 423 2 2 606 4174 88 68 78 chr2RHet 2830882 2831648 -457113 - Invader1_I LTR Gypsy 0 3186 2429 2 606 1097 44 170 0 chr2RHet 2831656 2831815 -456946 + PROTOP_B DNA P 1 186 -967 2 606 3028 11 0 0 chr2RHet 2831815 2832168 -456593 - Gypsy2_LTR LTR Gypsy 0 353 1 2 606 37268 62 19 20 chr2RHet 2832171 2838300 -450461 - Gypsy2_I LTR Gypsy -4 6131 686 2 606 7324 4 0 24 chr2RHet 2838300 2839155 -449606 - BS2 LINE Jockey 0 4721 3905 2 606 5006 22 66 21 chr2RHet 2839156 2839819 -448942 - Gypsy2_I LTR Gypsy -5442 693 1 2 606 3192 8 0 0 chr2RHet 2839819 2840172 -448589 - Gypsy2_LTR LTR Gypsy 0 353 1 2 606 4710 62 48 23 chr2RHet 2840172 2840908 -447853 + PROTOP_B DNA P 183 936 -217 2 606 293 50 0 0 chr2RHet 2840901 2840961 -447800 + PROTOP_B DNA P 572 631 -522 2 606 2722 54 17 0 chr2RHet 2840966 2841320 -447441 + PROTOP_B DNA P 794 1153 0 2 606 4339 148 36 13 chr2RHet 2841320 2842155 -446606 - Invader1_I LTR Gypsy -1106 2228 1301 2 606 929 34 8 0 chr2RHet 2842150 2842268 -446493 - DOC5_DM LINE Jockey -2419 2263 2145 2 606 3750 40 172 2 chr2RHet 2842265 2842811 -445950 - DOC5_DM LINE Jockey -2651 2031 1393 2 606 8545 51 35 3 chr2RHet 2842808 2843976 -444785 - DOC5_DM LINE Jockey -3474 1208 4 2 606 928 170 37 89 chr2RHet 2843987 2844233 -444528 + G_DM LINE Jockey 3653 3885 -461 2 606 3952 169 154 11 chr2RHet 2844268 2845217 -443544 + GTWIN_I LTR Gypsy 327 1411 -5010 2 606 1708 198 50 18 chr2RHet 2845209 2845590 -443171 + GTWIN_I LTR Gypsy 5535 5927 -494 2 606 1327 209 103 15 chr2RHet 2845617 2845956 -442805 + GTWIN_LTR LTR Gypsy 29 404 -91 2 606 320 100 0 20 chr2RHet 2846070 2846121 -442640 + HMSBEAGLE_I LTR Gypsy 1164 1213 -5316 2 606 1351 109 10 19 chr2RHet 2846136 2846489 -442272 + HMSBEAGLE_I LTR Gypsy 1551 2133 -4396 2 606 684 167 115 50 chr2RHet 2846489 2846854 -441907 + DNAREP1_DM LINE Penelope 88 592 -2 2 606 290 219 0 0 chr2RHet 2846868 2846932 -441829 + R1_DM LINE R1 1 64 -5292 2 606 4366 95 84 19 chr2RHet 2847245 2847943 -440818 + R1-2_DM LINE R1 250 993 -2223 2 606 3745 85 64 2 chr2RHet 2847942 2848486 -440275 + R1-2_DM LINE R1 1482 2059 -1157 2 606 2118 17 0 0 chr2RHet 2848479 2848717 -440044 - Gypsy4_I LTR Gypsy -3496 2792 2555 2 606 15182 20 27 10 chr2RHet 2848719 2850553 -438208 - Gypsy4_I LTR Gypsy -4423 1865 1 2 606 2412 31 3 0 chr2RHet 2850553 2850839 -437922 - Gypsy4_LTR LTR Gypsy 0 287 1 2 606 8793 48 28 1 chr2RHet 2850839 2851951 -436810 + DMCR1A LINE CR1 1196 2337 -2133 2 606 1760 31 190 3 chr2RHet 2851951 2852276 -436485 - ROOA_LTR LTR Pao 0 386 1 2 606 334 45 0 43 chr2RHet 2852291 2852337 -436424 - ROOA_I LTR Pao -7 6842 6799 2 606 6382 80 41 2 chr2RHet 2852364 2853281 -435480 - ROOA_I LTR Pao -2148 6108 4505 2 606 47 0 0 0 chr2RHet 2853294 2853341 -435420 + AT_rich Low_complexity Low_complexity 1 47 0 2 606 24 96 0 0 chr2RHet 2853901 2853974 -434787 + AT_rich Low_complexity Low_complexity 1 73 0 2 606 1950 13 22 0 chr2RHet 2855085 2855315 -433446 - STALKER4_LTR LTR Gypsy -167 235 1 2 606 3678 123 37 19 chr2RHet 2855315 2856087 -432674 - STALKER4_I LTR Gypsy -275 6255 5721 2 606 4504 22 0 0 chr2RHet 2856083 2856619 -432142 - STALKER4_I LTR Gypsy -1330 5200 4665 2 606 1946 18 0 0 chr2RHet 2856619 2856844 -431917 + ROOA_LTR LTR Pao 1 225 -161 2 606 653 88 246 0 chr2RHet 2856850 2856964 -431797 - STALKER4_I LTR Gypsy -2632 3898 3757 2 606 11738 146 98 10 chr2RHet 2856996 2859266 -429495 - STALKER4_I LTR Gypsy -3826 2704 235 2 606 25 0 0 0 chr2RHet 2859294 2859319 -429442 + AT_rich Low_complexity Low_complexity 1 25 0 2 606 3036 35 19 0 chr2RHet 2859457 2859829 -428932 - STALKER4_LTR LTR Gypsy -23 379 1 2 606 701 31 21 0 chr2RHet 2859829 2859925 -428836 - TLD2 Unknown Unknown -120 98 1 2 606 727 299 24 37 chr2RHet 2859854 2860236 -428525 - Gypsy4_I LTR Gypsy -3599 2689 2472 2 606 21 89 0 0 chr2RHet 2860481 2860537 -428224 + AT_rich Low_complexity Low_complexity 1 56 0 2 606 374 300 21 21 chr2RHet 2861708 2861901 -426860 - BURDOCK_I LTR Gypsy -4868 992 865 2 606 6638 33 30 33 chr2RHet 2862096 2862976 -425785 - ROOA_I LTR Pao -5972 877 1 2 606 3087 32 24 3 chr2RHet 2862976 2863354 -425407 - ROOA_LTR LTR Pao 0 386 1 2 606 2866 52 82 16 chr2RHet 2863354 2864028 -424733 + DMCR1A LINE CR1 2334 3052 -1418 2 606 7638 25 30 5 chr2RHet 2864012 2864972 -423789 - ROO_I LTR Pao -4570 3686 2703 2 606 337 347 25 62 chr2RHet 2866258 2866578 -422183 - Gypsy6_I LTR Gypsy -5228 1784 1477 2 606 22 56 0 0 chr2RHet 2867011 2867047 -421714 + AT_rich Low_complexity Low_complexity 1 36 0 2 606 44 0 0 0 chr2RHet 2867416 2867460 -421301 + AT_rich Low_complexity Low_complexity 1 44 0 2 606 8939 25 21 5 chr2RHet 2867970 2869073 -419688 + ROO_I LTR Pao 2567 3686 -4570 2 606 2980 51 82 12 chr2RHet 2869057 2869728 -419033 - DMCR1A LINE CR1 -1418 3052 2334 2 606 3102 35 24 0 chr2RHet 2869728 2870105 -418656 + ROOA_LTR LTR Pao 1 386 0 2 606 6612 34 30 33 chr2RHet 2870105 2870985 -417776 + ROOA_I LTR Pao 1 877 -5972 2 606 353 343 25 62 chr2RHet 2871224 2871544 -417217 + Gypsy6_I LTR Gypsy 1477 1784 -5228 2 606 7638 25 30 5 chr2RHet 2872830 2873790 -414971 + ROO_I LTR Pao 2703 3686 -4570 2 606 2980 51 82 12 chr2RHet 2873774 2874445 -414316 - DMCR1A LINE CR1 -1418 3052 2334 2 606 3117 32 24 0 chr2RHet 2874445 2874822 -413939 + ROOA_LTR LTR Pao 1 386 0 2 606 6612 34 30 33 chr2RHet 2874822 2875702 -413059 + ROOA_I LTR Pao 1 877 -5972 2 606 362 319 17 55 chr2RHet 2875941 2876261 -412500 + BURDOCK_I LTR Gypsy 851 992 -4868 2 606 21 89 0 0 chr2RHet 2876761 2876817 -411944 + AT_rich Low_complexity Low_complexity 1 56 0 2 606 967 343 42 41 chr2RHet 2876876 2877347 -411414 + Gypsy4_I LTR Gypsy 2255 2815 -3045 2 606 1536 28 19 5 chr2RHet 2877347 2877562 -411199 + TLD2 Unknown Unknown 1 218 0 2 606 967 343 42 41 chr2RHet 2877562 2878140 -410621 + Gypsy4_I LTR Gypsy 2816 3507 -2353 2 606 24 53 0 0 chr2RHet 2878661 2878699 -410062 + AT_rich Low_complexity Low_complexity 1 38 0 2 606 27 0 0 0 chr2RHet 2879468 2879495 -409266 + AT_rich Low_complexity Low_complexity 1 27 0 2 606 44 0 0 0 chr2RHet 2881451 2881495 -407266 + AT_rich Low_complexity Low_complexity 1 44 0 2 606 14951 32 1 20 chr2RHet 2881511 2883394 -405367 - ROO_I LTR Pao -5682 2574 727 2 606 366 107 0 0 chr2RHet 2883394 2883450 -405311 + (CTG)n Simple_repeat Simple_repeat 1 56 0 2 606 603 0 0 68 chr2RHet 2883450 2883538 -405223 - ROO_I LTR Pao -7616 640 559 2 75 1763 42 128 57 chr2RHet 2883533 2883814 -404947 - ROO_I LTR Pao -7955 301 1 2 607 3348 24 35 46 chr2RHet 2883814 2884247 -404514 - ROO_LTR LTR Pao 0 428 1 2 607 5169 52 85 0 chr2RHet 2884247 2884979 -403782 + DMCR1A LINE CR1 3609 4402 -68 2 607 773 153 76 0 chr2RHet 2885081 2885225 -403536 + DNAREP1_DM LINE Penelope 5 159 -435 2 607 30 59 0 0 chr2RHet 2885243 2885294 -403467 + AT_rich Low_complexity Low_complexity 1 51 0 2 607 48 93 0 0 chr2RHet 2885716 2885855 -402906 + AT_rich Low_complexity Low_complexity 1 139 0 2 607 1829 43 130 0 chr2RHet 2885911 2886165 -402596 - Gypsy4_LTR LTR Gypsy 0 287 1 2 607 4284 13 0 0 chr2RHet 2886165 2886643 -402118 - Gypsy4_I LTR Gypsy 0 6288 5811 2 607 27861 12 11 3 chr2RHet 2886641 2890520 -398241 - Gypsy4_I LTR Gypsy -681 5607 1702 2 607 8762 27 24 8 chr2RHet 2890520 2891608 -397153 - PROTOP_A DNA P 0 1105 1 2 607 13682 26 31 11 chr2RHet 2891608 2893282 -395479 - Gypsy4_I LTR Gypsy -4580 1708 1 2 607 2412 31 3 0 chr2RHet 2893282 2893568 -395193 - Gypsy4_LTR LTR Gypsy 0 287 1 2 607 21 104 0 0 chr2RHet 2895368 2895445 -393316 + AT_rich Low_complexity Low_complexity 1 77 0 2 607 398 71 0 0 chr2RHet 2895541 2895597 -393164 - TLD2 Unknown Unknown 0 218 163 2 607 2514 113 128 27 chr2RHet 2895646 2896121 -392640 - QUASIMODO_LTR LTR Gypsy -135 523 1 2 607 494 346 0 8 chr2RHet 2896848 2897090 -391671 + CIRCE LINE Composite 1931 2170 -4186 2 607 233 261 0 0 chr2RHet 2897277 2897346 -391415 + CIRCE LINE Composite 2781 2849 -3507 2 607 371 268 26 26 chr2RHet 2897984 2898099 -390662 + Gypsy2_I LTR Gypsy 1775 1889 -4246 2 607 1048 245 20 40 chr2RHet 2898164 2898466 -390295 + Gypsy3_I LTR Gypsy 2296 2591 -3586 2 607 250 254 0 0 chr2RHet 2898494 2898553 -390208 + Gypsy3_I LTR Gypsy 2716 2774 -3403 2 607 336 200 0 0 chr2RHet 2898549 2898609 -390152 + Gypsy3_I LTR Gypsy 2510 2569 -3608 2 607 2187 151 77 36 chr2RHet 2898647 2899087 -389674 + DNAREP1_DM LINE Penelope 137 594 0 2 607 21 36 0 0 chr2RHet 2899098 2899126 -389635 + AT_rich Low_complexity Low_complexity 1 28 0 2 607 2872 141 48 40 chr2RHet 2899340 2899918 -388843 + DNAREP1_DM LINE Penelope 2 584 -10 2 607 261 40 39 39 chr2RHet 2900164 2900216 -388545 + (TTAA)n Simple_repeat Simple_repeat 4 55 0 2 607 891 149 139 41 chr2RHet 2900222 2900546 -388215 + DNAREP1_DM LINE Penelope 1 488 -106 2 607 21 57 0 0 chr2RHet 2900669 2900704 -388057 + AT_rich Low_complexity Low_complexity 1 35 0 2 607 361 98 0 0 chr2RHet 2900822 2900873 -387888 + DNAREP1_DM LINE Penelope 543 593 -1 2 607 24 85 0 0 chr2RHet 2901331 2901390 -387371 + AT_rich Low_complexity Low_complexity 1 59 0 2 607 30 59 0 0 chr2RHet 2901843 2901894 -386867 + AT_rich Low_complexity Low_complexity 1 51 0 2 607 24 0 0 0 chr2RHet 2902066 2902090 -386671 + AT_rich Low_complexity Low_complexity 1 24 0 2 607 29 70 0 0 chr2RHet 2903590 2903647 -385114 + AT_rich Low_complexity Low_complexity 1 57 0 2 607 1922 49 54 36 chr2RHet 2903777 2904054 -384707 - Mariner2_DM DNA Tc1 -8 904 623 2 607 3567 48 2 0 chr2RHet 2904144 2904578 -384183 - Mariner2_DM DNA Tc1 -477 435 1 2 607 21 0 0 0 chr2RHet 2905374 2905395 -383366 + AT_rich Low_complexity Low_complexity 1 21 0 2 607 23 33 0 0 chr2RHet 2905625 2905655 -383106 + AT_rich Low_complexity Low_complexity 1 30 0 2 607 225 322 94 6 chr2RHet 2906401 2906582 -382179 - Invader6_I LTR Gypsy -570 3529 3333 2 607 377 330 36 10 chr2RHet 2906720 2906916 -381845 - MICROPIA_I LTR Gypsy -1208 3268 3068 2 607 1076 131 149 0 chr2RHet 2906916 2907127 -381634 - DMCR1A LINE CR1 -1791 2679 2437 2 607 2826 100 78 13 chr2RHet 2907127 2907602 -381159 - DNAREP1_DM LINE Penelope 0 594 89 2 607 468 171 168 17 chr2RHet 2907618 2907791 -380970 - DNAREP1_DM LINE Penelope -306 288 90 2 607 2317 180 245 5 chr2RHet 2907787 2908461 -380300 - DM297_I LTR Gypsy -3428 2739 1904 2 607 771 188 0 0 chr2RHet 2908518 2908662 -380099 - DM297_I LTR Gypsy -4696 1471 1328 2 607 1028 218 134 64 chr2RHet 2908649 2909149 -379612 - DM297_I LTR Gypsy -5537 630 96 2 607 644 50 0 0 chr2RHet 2909178 2909258 -379503 + FB4_DM DNA Tc1 1274 1353 -2736 2 607 204 40 0 0 chr2RHet 2909258 2909283 -379478 + (CATTT)n Simple_repeat Simple_repeat 1 25 0 2 607 325 239 9 9 chr2RHet 2909314 2909424 -379337 + (CTG)n Simple_repeat Simple_repeat 1 110 0 2 607 227 282 0 0 chr2RHet 2910687 2910758 -378003 + G-rich Low_complexity Low_complexity 1 71 0 2 607 2931 84 177 14 chr2RHet 2910923 2911816 -376945 + FB4_DM DNA Tc1 1392 2429 -1660 2 607 902 117 27 16 chr2RHet 2911821 2912004 -376757 + FB4_DM DNA Tc1 2569 2753 -1336 2 607 200 300 0 22 chr2RHet 2912291 2912383 -376378 + (TA)n Simple_repeat Simple_repeat 1 90 0 2 607 291 140 20 0 chr2RHet 2912386 2912436 -376325 + DNAREP1_DM LINE Penelope 543 593 -1 2 607 410 268 168 23 chr2RHet 2913403 2913617 -375144 - PROTOP DNA P 0 4480 4236 2 607 516 178 0 10 chr2RHet 2913635 2913737 -375024 + PROTOP_A DNA P 1 101 -1004 2 607 822 126 0 82 chr2RHet 2913737 2913919 -374842 + PROTOP_A DNA P 282 448 -657 2 607 1415 138 80 8 chr2RHet 2914092 2914354 -374407 + PROTOP_A DNA P 818 1104 -1 2 607 584 169 262 5 chr2RHet 2914444 2914665 -374096 + DNAREP1_DM LINE Penelope 40 317 -277 2 607 1542 120 242 53 chr2RHet 2914660 2915081 -373680 - DNAREP1_DM LINE Penelope -7 587 123 2 607 1508 123 28 12 chr2RHet 2915092 2915347 -373414 - DNAREP1_DM LINE Penelope -335 259 1 2 607 522 106 0 56 chr2RHet 2915601 2915691 -373070 - PROTOP_B DNA P 0 1153 1069 2 607 1464 145 119 58 chr2RHet 2915810 2916220 -372541 - PROTOP DNA P -3824 656 220 2 607 3279 110 64 4 chr2RHet 2916260 2916790 -371971 - DNAREP1_DM LINE Penelope -32 562 1 2 607 28 29 0 0 chr2RHet 2917318 2917353 -371408 + AT_rich Low_complexity Low_complexity 1 35 0 2 607 3008 96 33 0 chr2RHet 2917429 2917919 -370842 - Invader2_I LTR Gypsy -68 4524 4019 2 607 522 186 11 19 chr2RHet 2918244 2918378 -370383 - Gypsy8_LTR LTR Gypsy 0 304 113 2 607 4788 38 21 5 chr2RHet 2918578 2919187 -369574 - CIRCE LINE Composite -1376 4980 4362 2 607 4836 321 45 37 chr2RHet 2919511 2923367 -365394 + MICROPIA_I LTR Gypsy 1 3876 -600 2 607 22577 32 67 52 chr2RHet 2924414 2927762 -360999 - CIRCE LINE Composite -1983 4373 973 2 607 8371 16 0 27 chr2RHet 2927895 2928892 -359869 - CIRCE LINE Composite -5386 970 1 2 607 8148 39 16 32 chr2RHet 2928892 2930065 -358696 - CIRCE LINE Composite 0 6356 5256 2 607 1733 167 19 92 chr2RHet 2930065 2930488 -358273 + Gypsy3_LTR LTR Gypsy 1 392 -6 2 607 17969 215 28 27 chr2RHet 2930574 2935915 -352846 + Gypsy6_I LTR Gypsy 27 5657 -1355 2 607 3901 0 0 2 chr2RHet 2935915 2936344 -352417 - ROO_LTR LTR Pao 0 428 1 2 607 20913 0 0 0 chr2RHet 2936344 2938696 -350065 - ROO_I LTR Pao 0 8256 5904 2 607 7443 254 35 16 chr2RHet 2979490 2982517 -306244 + QUASIMODO_I LTR Gypsy 2881 6060 0 2 607 242 79 0 116 chr2RHet 2982517 2982560 -306201 + QUASIMODO_LTR LTR Gypsy 1 38 -620 2 607 204 40 0 0 chr2RHet 2982560 2982585 -306176 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 607 10545 38 15 1 chr2RHet 2982594 2983875 -304886 + DMRT1B LINE R1 3885 5183 0 2 607 3097 115 49 9 chr2RHet 2983866 2984392 -304369 + QUASIMODO_LTR LTR Gypsy 43 589 -69 2 607 30 0 0 0 chr2RHet 2984805 2984835 -303926 + AT_rich Low_complexity Low_complexity 1 30 0 2 607 1005 307 24 24 chr2RHet 2984882 2985373 -303388 + QUASIMODO_I LTR Gypsy 429 919 -5044 2 607 11461 255 41 19 chr2RHet 2985400 2990034 -298727 + QUASIMODO_I LTR Gypsy 1294 6060 0 2 607 529 72 0 57 chr2RHet 2990034 2990122 -298639 + QUASIMODO_LTR LTR Gypsy 1 83 -575 2 607 7038 34 5 0 chr2RHet 2990121 2990963 -297798 + DMRT1A LINE R1 2662 3507 -1676 2 607 1358 70 0 0 chr2RHet 2990969 2991140 -297621 + DMRT1A LINE R1 3620 3790 -1393 2 607 9100 43 19 3 chr2RHet 2991139 2992267 -296494 + DMRT1A LINE R1 3932 5078 -105 2 607 4721 36 7 3 chr2RHet 2992263 2992848 -295913 + QUASIMODO_LTR LTR Gypsy 72 658 0 2 607 22 0 0 0 chr2RHet 2992848 2992870 -295891 + AT_rich Low_complexity Low_complexity 1 22 0 2 607 3188 3 0 24 chr2RHet 2992919 2993295 -295466 + ROVER-LTR_DM LTR Gypsy 1 367 0 2 607 11666 2 90 61 chr2RHet 2993295 2994898 -293863 + ROVER-I_DM LTR Gypsy 1 1649 -4935 2 607 9576 16 0 0 chr2RHet 2994898 2996003 -292758 - PROTOP_A DNA P 0 1105 1 2 607 34574 4 1 3 chr2RHet 2996003 3000000 -288761 + ROVER-I_DM LTR Gypsy 1643 5633 -951 2 607 8191 5 2 0 chr2RHet 3000000 3000949 -287812 + ROVER-I_DM LTR Gypsy 5634 6584 0 2 607 3269 3 0 24 chr2RHet 3000949 3001324 -287437 + ROVER-LTR_DM LTR Gypsy 1 366 -1 2 607 340 21 82 31 chr2RHet 3001324 3001421 -287340 + (TA)n Simple_repeat Simple_repeat 1 102 0 2 607 2137 100 2 30 chr2RHet 3001421 3001954 -286807 - Invader2_I LTR Gypsy -2178 2414 1833 2 607 8924 82 1 8 chr2RHet 3001952 3003457 -285304 - I_DM LINE I -754 5477 3930 2 607 3777 62 0 0 chr2RHet 3003450 3003921 -284840 - I_DM LINE I -2424 3807 3337 2 607 995 117 174 0 chr2RHet 3003920 3004116 -284645 - Invader2_I LTR Gypsy -2915 1677 1448 2 607 8619 21 2 22 chr2RHet 3004762 3005804 -282957 + G_DM LINE Jockey 3326 4346 0 2 607 2949 55 0 0 chr2RHet 3006064 3006425 -282336 - BEL_LTR LTR Pao 0 361 1 2 607 34829 21 17 2 chr2RHet 3006425 3011750 -277011 - BEL_I LTR Pao 0 5404 2 2 607 2943 55 0 0 chr2RHet 3011754 3012115 -276646 - BEL_LTR LTR Pao 0 361 1 2 607 37 62 0 0 chr2RHet 3012156 3012221 -276540 + AT_rich Low_complexity Low_complexity 1 65 0 2 607 730 344 88 8 chr2RHet 3012531 3013006 -275755 + HMSBEAGLE_I LTR Gypsy 1505 2017 -4512 2 607 249 273 35 35 chr2RHet 3013584 3013698 -275063 + HMSBEAGLE_I LTR Gypsy 2650 2763 -3766 2 75 1659 324 60 44 chr2RHet 3014259 3015394 -273367 + HMSBEAGLE_I LTR Gypsy 3434 4586 -1943 2 608 323 324 35 39 chr2RHet 3015635 3015986 -272775 + HMSBEAGLE_I LTR Gypsy 4220 4379 -2128 2 608 21 0 0 0 chr2RHet 3016254 3016275 -272486 + AT_rich Low_complexity Low_complexity 1 21 0 2 608 218 156 22 0 chr2RHet 3017693 3017738 -271023 + (TTA)n Simple_repeat Simple_repeat 3 48 0 2 608 32 0 0 0 chr2RHet 3018171 3018203 -270558 + AT_rich Low_complexity Low_complexity 1 32 0 2 608 24 32 0 0 chr2RHet 3018223 3018254 -270507 + AT_rich Low_complexity Low_complexity 1 31 0 2 608 552 87 0 69 chr2RHet 3018772 3018859 -269902 - PROTOP DNA P -2 4478 4396 2 608 924 147 172 18 chr2RHet 3018858 3019103 -269658 - PROTOP DNA P -362 4118 3918 2 608 503 117 42 11 chr2RHet 3019096 3019191 -269570 - PROTOP DNA P -3399 1081 984 2 608 1241 92 286 0 chr2RHet 3019170 3019565 -269196 - PROTOP DNA P -3773 707 199 2 608 2072 241 69 18 chr2RHet 3019640 3020442 -268319 - GTWIN_I LTR Gypsy -355 7167 6015 2 608 6126 203 57 14 chr2RHet 3020420 3021675 -267086 - GTWIN_I LTR Gypsy -667 5754 4445 2 608 10689 42 20 0 chr2RHet 3021673 3022946 -265815 - Baggins1 LINE LOA 0 5453 4156 2 608 1750 82 129 0 chr2RHet 3022942 3023198 -265563 - BS2 LINE Jockey -3979 742 454 2 608 262 59 0 0 chr2RHet 3023198 3023231 -265530 + G5A_DM LINE Jockey 2388 2420 -421 2 608 2364 149 25 18 chr2RHet 3023231 3023668 -265093 + DM412B_LTR LTR Gypsy 1 440 -131 2 608 3470 40 0 19 chr2RHet 3023708 3024139 -264622 + G5A_DM LINE Jockey 2419 2841 0 2 608 1493 108 0 9 chr2RHet 3024171 3024385 -264376 - BS2 LINE Jockey -4260 461 250 2 608 403 257 19 19 chr2RHet 3024391 3024498 -264263 - GTWIN_I LTR Gypsy -4769 1652 1546 2 608 2832 190 177 18 chr2RHet 3024587 3025310 -263451 - GTWIN_I LTR Gypsy -5149 1272 435 2 608 22 0 0 0 chr2RHet 3025419 3025441 -263320 + AT_rich Low_complexity Low_complexity 1 22 0 2 608 27 87 0 0 chr2RHet 3025483 3025552 -263209 + AT_rich Low_complexity Low_complexity 1 69 0 2 608 237 205 229 0 chr2RHet 3025637 3025720 -263041 - Gypsy_I LTR Gypsy -6405 102 1 2 608 2072 242 69 18 chr2RHet 3025830 3026632 -262129 - GTWIN_I LTR Gypsy -355 7167 6015 2 608 6083 204 57 14 chr2RHet 3026610 3027865 -260896 - GTWIN_I LTR Gypsy -667 5754 4445 2 608 11281 38 49 0 chr2RHet 3027863 3029221 -259540 - Baggins1 LINE LOA 0 5453 4030 2 608 1750 191 129 0 chr2RHet 3029222 3029579 -259182 - GTWIN_I LTR Gypsy -1969 4452 4050 2 608 665 69 0 0 chr2RHet 3029578 3029665 -259096 - BS3_DM LINE Jockey 0 1790 1704 2 608 2887 61 3 0 chr2RHet 3029664 3030024 -258737 - BS3_DM LINE Jockey -633 1157 797 2 608 1735 52 24 0 chr2RHet 3030023 3030235 -258526 - BS3_DM LINE Jockey -1184 606 390 2 608 1014 262 96 23 chr2RHet 3030236 3030580 -258181 - BS2 LINE Jockey -1711 3010 2642 2 608 4106 108 56 0 chr2RHet 3030562 3031166 -257595 - BS2 LINE Jockey -3630 1091 454 2 608 262 59 0 0 chr2RHet 3031166 3031199 -257562 + G5A_DM LINE Jockey 2388 2420 -421 2 608 2364 149 25 18 chr2RHet 3031199 3031636 -257125 + DM412B_LTR LTR Gypsy 1 440 -131 2 608 3445 43 0 19 chr2RHet 3031676 3032107 -256654 + G5A_DM LINE Jockey 2419 2841 0 2 608 1508 108 0 9 chr2RHet 3032139 3032354 -256407 - BS2 LINE Jockey -4259 462 250 2 608 395 267 19 19 chr2RHet 3032360 3032467 -256294 - GTWIN_I LTR Gypsy -4769 1652 1546 2 608 2814 191 177 18 chr2RHet 3032556 3033279 -255482 - GTWIN_I LTR Gypsy -5149 1272 435 2 608 23 0 0 0 chr2RHet 3033388 3033411 -255350 + AT_rich Low_complexity Low_complexity 1 23 0 2 608 26 88 0 0 chr2RHet 3033453 3033521 -255240 + AT_rich Low_complexity Low_complexity 1 68 0 2 608 237 205 229 0 chr2RHet 3033606 3033689 -255072 - Gypsy_I LTR Gypsy -6405 102 1 2 608 2034 244 70 18 chr2RHet 3033799 3034601 -254160 - GTWIN_I LTR Gypsy -346 7176 6015 2 608 6134 202 57 14 chr2RHet 3034579 3035834 -252927 - GTWIN_I LTR Gypsy -667 5754 4445 2 608 11257 38 49 0 chr2RHet 3035832 3037190 -251571 - Baggins1 LINE LOA 0 5453 4030 2 608 1870 185 113 0 chr2RHet 3037191 3037553 -251208 - GTWIN_I LTR Gypsy -1969 4452 4050 2 608 665 69 0 0 chr2RHet 3037553 3037640 -251121 - BS3_DM LINE Jockey 0 1790 1704 2 608 2887 61 3 0 chr2RHet 3037639 3037999 -250762 - BS3_DM LINE Jockey -633 1157 797 2 608 1735 52 24 0 chr2RHet 3037998 3038210 -250551 - BS3_DM LINE Jockey -1184 606 390 2 608 1045 265 96 20 chr2RHet 3038211 3038554 -250207 - BS2 LINE Jockey -1711 3010 2642 2 608 4097 108 56 0 chr2RHet 3038536 3039140 -249621 - BS2 LINE Jockey -3630 1091 454 2 608 262 59 0 0 chr2RHet 3039140 3039173 -249588 + G5A_DM LINE Jockey 2388 2420 -421 2 608 2337 152 25 18 chr2RHet 3039173 3039610 -249151 + DM412B_LTR LTR Gypsy 1 440 -131 2 608 3445 43 0 19 chr2RHet 3039650 3040081 -248680 + G5A_DM LINE Jockey 2419 2841 0 2 608 1508 108 0 9 chr2RHet 3040113 3040328 -248433 - BS2 LINE Jockey -4259 462 250 2 608 395 267 19 19 chr2RHet 3040334 3040441 -248320 - GTWIN_I LTR Gypsy -4769 1652 1546 2 608 2814 191 177 18 chr2RHet 3040530 3041253 -247508 - GTWIN_I LTR Gypsy -5149 1272 435 2 608 23 0 0 0 chr2RHet 3041362 3041385 -247376 + AT_rich Low_complexity Low_complexity 1 23 0 2 608 26 88 0 0 chr2RHet 3041427 3041495 -247266 + AT_rich Low_complexity Low_complexity 1 68 0 2 608 237 205 229 0 chr2RHet 3041580 3041663 -247098 - Gypsy_I LTR Gypsy -6405 102 1 2 608 2034 244 70 18 chr2RHet 3041773 3042575 -246186 - GTWIN_I LTR Gypsy -346 7176 6015 2 608 6134 202 57 14 chr2RHet 3042553 3043808 -244953 - GTWIN_I LTR Gypsy -667 5754 4445 2 608 11257 38 49 0 chr2RHet 3043806 3045164 -243597 - Baggins1 LINE LOA 0 5453 4030 2 608 1502 214 48 0 chr2RHet 3045165 3045522 -243239 - GTWIN_I LTR Gypsy -1962 4545 4143 2 608 665 69 0 0 chr2RHet 3045521 3045608 -243153 - BS3_DM LINE Jockey 0 1790 1704 2 608 2887 61 3 0 chr2RHet 3045607 3045967 -242794 - BS3_DM LINE Jockey -633 1157 797 2 608 1735 52 24 0 chr2RHet 3045966 3046178 -242583 - BS3_DM LINE Jockey -1184 606 390 2 608 1041 265 96 20 chr2RHet 3046179 3046522 -242239 - BS2 LINE Jockey -1711 3010 2642 2 608 4128 104 56 0 chr2RHet 3046504 3047108 -241653 - BS2 LINE Jockey -3630 1091 454 2 608 262 59 0 0 chr2RHet 3047108 3047141 -241620 + G5A_DM LINE Jockey 2388 2420 -421 2 608 2380 157 18 11 chr2RHet 3047141 3047578 -241183 + DM412B_LTR LTR Gypsy 1 440 -131 2 608 3469 40 0 19 chr2RHet 3047618 3048049 -240712 + G5A_DM LINE Jockey 2419 2841 0 2 608 1437 123 0 9 chr2RHet 3048082 3048296 -240465 - BS2 LINE Jockey -4260 461 250 2 608 403 257 19 19 chr2RHet 3048302 3048409 -240352 - GTWIN_I LTR Gypsy -4769 1652 1546 2 608 1833 174 22 0 chr2RHet 3048498 3048819 -239942 - GTWIN_I LTR Gypsy -5149 1272 945 2 608 360 210 151 12 chr2RHet 3048845 3048982 -239779 - GTWIN_I LTR Gypsy -5902 605 435 2 608 183 80 0 0 chr2RHet 3049080 3049105 -239656 + (T)n Simple_repeat Simple_repeat 1 25 0 2 608 26 88 0 0 chr2RHet 3049155 3049223 -239538 + AT_rich Low_complexity Low_complexity 1 68 0 2 608 237 205 229 0 chr2RHet 3049308 3049391 -239370 - Gypsy_I LTR Gypsy -6405 102 1 2 608 653 231 136 80 chr2RHet 3049506 3050023 -238738 - GTWIN_I LTR Gypsy -417 7105 6359 2 608 2042 129 51 19 chr2RHet 3050025 3050470 -238291 - DNAREP1_DM LINE Penelope -262 332 1 2 608 4292 183 109 134 chr2RHet 3051521 3053127 -235634 + Gypsy12A_LTR LTR Gypsy 1 1566 -714 2 608 3471 42 18 0 chr2RHet 3053158 3053605 -235156 - DOC5_DM LINE Jockey 0 4682 4228 2 608 233 128 128 0 chr2RHet 3053638 3053685 -235076 + DNAREP1_DM LINE Penelope 320 372 -222 2 608 1364 233 107 69 chr2RHet 3053750 3054412 -234349 + GTWIN_I LTR Gypsy 6128 6421 0 2 608 24 0 0 0 chr2RHet 3054695 3054719 -234042 + AT_rich Low_complexity Low_complexity 1 24 0 2 608 10086 44 31 4 chr2RHet 3054724 3056967 -231794 + IDEFIX_I LTR Gypsy 535 2836 -2792 2 608 18795 43 24 8 chr2RHet 3056961 3059542 -229219 - ZAM_I LTR Gypsy -3287 4203 1556 2 608 3171 62 120 25 chr2RHet 3059526 3059910 -228851 - ZAM_I LTR Gypsy -6271 1219 840 2 608 423 0 0 0 chr2RHet 3059910 3059957 -228804 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 608 3171 71 57 23 chr2RHet 3059957 3060233 -228528 - ZAM_I LTR Gypsy -6651 839 662 2 608 2473 131 65 50 chr2RHet 3060233 3060698 -228063 - ZAM_LTR LTR Gypsy 0 472 1 2 608 37 39 0 0 chr2RHet 3060800 3060851 -227910 + AT_rich Low_complexity Low_complexity 1 51 0 2 608 360 149 29 43 chr2RHet 3060854 3060924 -227837 - DNAREP1_DM LINE Penelope -105 489 421 2 608 30 27 0 0 chr2RHet 3060954 3060991 -227770 + AT_rich Low_complexity Low_complexity 1 37 0 2 608 1574 126 138 11 chr2RHet 3061334 3061789 -226972 - DNAREP1_DM LINE Penelope -82 512 1 2 608 12305 90 33 3 chr2RHet 3061863 3063721 -225040 - I_DM LINE I -742 5489 3354 2 608 15070 87 18 9 chr2RHet 3063734 3065963 -222798 - I_DM LINE I -2972 3259 1010 2 608 2088 66 7 0 chr2RHet 3066286 3066558 -222203 - IVK_DM LINE I -4 5398 5125 2 608 3225 94 83 6 chr2RHet 3066573 3067054 -221707 - IVK_DM LINE I -573 4829 4312 2 608 9096 78 85 2 chr2RHet 3067052 3068325 -220436 - IVK_DM LINE I -1244 4158 2780 2 608 11303 71 63 15 chr2RHet 3068323 3070043 -218718 - IVK_DM LINE I -2810 2592 790 2 608 1971 80 0 0 chr2RHet 3070037 3070287 -218474 - IVK_DM LINE I -4810 592 343 2 608 237 203 29 0 chr2RHet 3070346 3070415 -218346 + T-rich Low_complexity Low_complexity 2 72 0 2 608 867 328 80 2 chr2RHet 3071396 3071797 -216964 + Gypsy12_I LTR Gypsy 2898 3329 -2217 2 608 348 274 92 63 chr2RHet 3074263 3074501 -214260 + Invader2_I LTR Gypsy 2095 2339 -2253 2 608 930 91 314 8 chr2RHet 3074838 3075083 -213678 + DMCR1A LINE CR1 86 405 -4065 2 608 1447 135 0 101 chr2RHet 3075285 3075445 -213316 + DMRT1B LINE R1 1 147 -5036 2 608 198 0 0 0 chr2RHet 3075445 3075467 -213294 + (TAA)n Simple_repeat Simple_repeat 3 24 0 2 608 1447 135 0 101 chr2RHet 3075467 3075594 -213167 + DMRT1B LINE R1 148 259 -4924 2 608 2421 129 236 0 chr2RHet 3076040 3076557 -212204 + DMRT1B LINE R1 312 950 -4233 2 608 1582 155 287 3 chr2RHet 3076575 3076927 -211834 + DMRT1B LINE R1 1305 1756 -3427 2 608 451 117 0 83 chr2RHet 3076923 3077007 -211754 + DMRT1B LINE R1 1898 1974 -3209 2 608 1585 134 114 0 chr2RHet 3076986 3077391 -211370 + DMRT1B LINE R1 2104 2554 -2629 2 608 243 188 63 105 chr2RHet 3077391 3077486 -211275 + TABOR_LTR LTR Gypsy 1 91 -415 2 608 428 115 0 143 chr2RHet 3077737 3077828 -210933 + MDG1_I LTR Gypsy 1 78 -6518 2 608 3294 125 2 8 chr2RHet 3077879 3078395 -210366 + MDG1_I LTR Gypsy 72 584 -6012 2 608 930 127 238 125 chr2RHet 3078521 3079049 -209712 + MDG1_I LTR Gypsy 654 1241 -5355 2 608 343 277 101 51 chr2RHet 3079233 3079450 -209311 - Invader2_I LTR Gypsy -2253 2339 2112 2 608 1520 56 98 12 chr2RHet 3079864 3080110 -208651 + DOC2_DM LINE Jockey 10 309 -4484 2 608 36807 18 16 7 chr2RHet 3080107 3084377 -204384 + DOC2_DM LINE Jockey 482 4793 0 2 608 548 285 67 0 chr2RHet 3086491 3086656 -202105 - Gypsy12_I LTR Gypsy -2217 3329 3154 2 608 5463 111 0 0 chr2RHet 3086687 3087450 -201311 + DMRT1B LINE R1 3134 3896 -1287 2 608 1439 76 41 0 chr2RHet 3087451 3087648 -201113 - TRANSIB2 DNA Transib 0 2844 2640 2 608 43197 1 0 0 chr2RHet 3087631 3092323 -196438 - FW_DM LINE Jockey 0 4692 1 2 608 2785 88 79 7 chr2RHet 3092333 3092777 -195984 - TRANSIB2 DNA Transib -174 2670 1810 2 608 15495 51 68 16 chr2RHet 3093136 3095237 -193524 - TRANSIB2 DNA Transib -624 2220 10 2 608 2348 131 195 0 chr2RHet 3095240 3095972 -192789 + DMRT1B LINE R1 3968 4843 -340 2 608 600 341 79 60 chr2RHet 3096847 3099259 -189502 - Invader3_I LTR Gypsy -1 4480 2037 2 608 539 334 72 67 chr2RHet 3102104 3104553 -184208 - BLASTOPIA_I LTR Gypsy -1 4480 2037 2 608 27 62 0 0 chr2RHet 3107275 3107323 -181438 + AT_rich Low_complexity Low_complexity 1 48 0 2 608 14889 63 80 44 chr2RHet 3107485 3109675 -179086 + MAX_I LTR Pao 557 2824 -5090 2 608 3586 24 0 0 chr2RHet 3109667 3110076 -178685 + MAX_I LTR Pao 3152 3560 -4354 2 608 12007 33 9 28 chr2RHet 3110074 3111600 -177161 + MAX_I LTR Pao 6418 7914 0 2 608 1953 103 70 0 chr2RHet 3111600 3111900 -176861 + MAX_LTR LTR Pao 1 321 0 2 608 3693 304 16 14 chr2RHet 3111900 3113303 -175458 + Gypsy5_I LTR Gypsy 2148 3552 -2957 2 608 8850 28 38 3 chr2RHet 3113987 3115055 -173706 + PROTOP_A DNA P 1 1105 0 2 608 24 32 0 0 chr2RHet 3115152 3115183 -173578 + AT_rich Low_complexity Low_complexity 1 31 0 2 608 4063 45 97 0 chr2RHet 3115239 3115777 -172984 + DOC3_DM LINE Jockey 316 905 -3835 2 608 2841 34 0 0 chr2RHet 3115773 3116129 -172632 + DOC3_DM LINE Jockey 1197 1552 -3188 2 608 3704 42 8 0 chr2RHet 3116134 3116614 -172147 + DOC3_DM LINE Jockey 3159 3642 -1098 2 608 9105 52 6 2 chr2RHet 3116695 3117882 -170879 + DMCR1A LINE CR1 926 2117 -2353 2 608 4715 63 36 8 chr2RHet 3117882 3118594 -170167 + DMCR1A LINE CR1 206 986 -3484 2 608 3837 30 63 10 chr2RHet 3118595 3119101 -169660 + DMCR1A LINE CR1 1161 1693 -2777 2 608 4745 38 13 0 chr2RHet 3119124 3119728 -169033 + DMCR1A LINE CR1 1882 2493 -1977 2 608 1865 39 0 0 chr2RHet 3119719 3119953 -168808 + DMCR1A LINE CR1 2913 3146 -1324 2 608 4385 6 0 0 chr2RHet 3119953 3120459 -168302 + TABOR_LTR LTR Gypsy 1 506 0 2 608 52027 2 1 0 chr2RHet 3120459 3126671 -162090 + TABOR_I LTR Gypsy 1 6336 0 2 608 4385 6 0 0 chr2RHet 3126669 3127175 -161586 + TABOR_LTR LTR Gypsy 1 506 0 2 608 6788 32 12 1 chr2RHet 3127175 3128026 -160735 + DMCR1A LINE CR1 3143 4002 -468 2 608 2612 15 36 9 chr2RHet 3128028 3128360 -160401 + DMCR1A LINE CR1 4130 4470 0 2 608 419 170 90 0 chr2RHet 3128370 3128470 -160291 - Gypsy2_I LTR Gypsy -3407 2728 2620 2 608 2773 213 72 8 chr2RHet 3128469 3129108 -159653 - Gypsy2_I LTR Gypsy -3642 2493 1814 2 608 2030 263 65 23 chr2RHet 3129106 3130032 -158729 - Gypsy2_I LTR Gypsy -4213 1964 992 2 608 2594 27 15 3 chr2RHet 3130071 3130401 -158360 + DMCR1A LINE CR1 2160 2493 -1977 2 608 8633 33 9 1 chr2RHet 3130392 3131473 -157288 + DMCR1A LINE CR1 2913 4002 -468 2 608 2612 15 36 9 chr2RHet 3131475 3131807 -156954 + DMCR1A LINE CR1 4130 4470 0 2 608 419 170 90 0 chr2RHet 3131817 3131917 -156844 - Gypsy2_I LTR Gypsy -3407 2728 2620 2 608 2773 213 72 8 chr2RHet 3131916 3132555 -156206 - Gypsy2_I LTR Gypsy -3642 2493 1814 2 608 3114 279 87 31 chr2RHet 3132553 3134275 -154486 - Gypsy2_I LTR Gypsy -4213 1964 336 2 608 3764 44 0 0 chr2RHet 3134893 3135374 -153387 - PROTOP DNA P -3999 481 1 2 608 39 0 0 0 chr2RHet 3136186 3136225 -152536 + AT_rich Low_complexity Low_complexity 1 39 0 2 608 22 35 0 0 chr2RHet 3136326 3136355 -152406 + AT_rich Low_complexity Low_complexity 1 29 0 2 608 465 135 0 0 chr2RHet 3136641 3136730 -152031 + (TA)n Simple_repeat Simple_repeat 1 89 0 2 608 30 0 0 0 chr2RHet 3137908 3137938 -150823 + AT_rich Low_complexity Low_complexity 1 30 0 2 608 278 83 62 0 chr2RHet 3137938 3137986 -150775 - DNAREP1_DM LINE Penelope -1 593 543 2 608 1502 52 9 13 chr2RHet 3137985 3138218 -150543 + S2_DM DNA Tc1 56 287 -1448 2 608 4622 39 14 29 chr2RHet 3138218 3138872 -149889 + PROTOP_A DNA P 1 644 -461 2 608 2241 33 0 0 chr2RHet 3138867 3139139 -149622 + PROTOP_A DNA P 834 1105 0 2 608 7570 53 63 20 chr2RHet 3139158 3140279 -148482 + S2_DM DNA Tc1 567 1735 0 2 608 264 111 67 0 chr2RHet 3140279 3140323 -148438 - DNAREP1_DM LINE Penelope -50 544 498 2 608 343 323 13 0 chr2RHet 3140877 3141032 -147729 - Invader6_I LTR Gypsy -560 3539 3383 2 608 293 259 20 19 chr2RHet 3141107 3141285 -147476 - Invader4_I LTR Gypsy -3394 1082 907 2 608 311 345 0 0 chr2RHet 3141548 3141693 -147068 - Invader6_I LTR Gypsy -3476 623 479 2 608 441 330 30 14 chr2RHet 3141731 3142084 -146677 - Invader4_I LTR Gypsy -4114 362 1 2 608 349 242 0 116 chr2RHet 3142477 3142650 -146111 + Gypsy8_LTR LTR Gypsy 1 153 -151 2 608 436 67 26 13 chr2RHet 3142782 3142858 -145903 - DM297_I LTR Gypsy -519 5648 5572 2 608 2228 146 90 19 chr2RHet 3142858 3143442 -145319 - DM297_I LTR Gypsy -1430 4990 4278 2 608 2282 110 140 17 chr2RHet 3143946 3144417 -144344 - DM297_I LTR Gypsy -2099 4068 3540 2 608 2854 168 48 2 chr2RHet 3144422 3145061 -143700 - DM297_I LTR Gypsy -4573 1594 926 2 608 2074 24 181 0 chr2RHet 3145061 3145387 -143374 + DIVER2_LTR LTR Pao 1 385 0 2 9 24505 9 43 0 chr2RHet 3145387 3149362 -139399 + DIVER2_I LTR Pao 1 4147 0 2 609 3062 47 0 0 chr2RHet 3149362 3149747 -139014 + DIVER2_LTR LTR Pao 1 385 0 2 609 900 151 0 0 chr2RHet 3149747 3149902 -138859 - DM297_I LTR Gypsy -5237 930 776 2 609 21 0 0 0 chr2RHet 3149942 3149963 -138798 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 249 105 5 15 chr2RHet 3150285 3150350 -138411 - DM297_I LTR Gypsy -6046 66 1 2 609 697 114 29 29 chr2RHet 3150350 3150486 -138275 - DM297_LTR LTR Gypsy 0 414 279 2 609 8689 39 68 32 chr2RHet 3151690 3153574 -135187 - G4_DM LINE Jockey -1 3855 1789 2 609 2245 131 84 21 chr2RHet 3153570 3154200 -134561 - DNAREP1_DM LINE Penelope -34 560 1 2 609 246 93 36 18 chr2RHet 3154197 3154252 -134509 - DNAREP1_DM LINE Penelope -461 133 78 2 609 25 31 0 0 chr2RHet 3155519 3155551 -133210 + AT_rich Low_complexity Low_complexity 1 32 0 2 609 353 202 0 67 chr2RHet 3155556 3155646 -133115 + DNAREP1_DM LINE Penelope 25 108 -486 2 609 423 204 35 101 chr2RHet 3155651 3155820 -132941 + DNAREP1_DM LINE Penelope 214 371 -223 2 609 3380 44 58 10 chr2RHet 3155862 3156341 -132420 - PROTOP DNA P -3978 502 1 2 609 387 41 0 0 chr2RHet 3156341 3156390 -132371 + PROTOP_B DNA P 1105 1153 0 2 609 1219 100 53 0 chr2RHet 3156478 3156668 -132093 - R1_DM LINE R1 0 5356 5157 2 609 805 29 194 56 chr2RHet 3157814 3157958 -130803 + G5A_DM LINE Jockey 2678 2841 0 2 609 4492 132 40 25 chr2RHet 3158050 3159367 -129394 + Gypsy10_I LTR Gypsy 300 1543 -3735 2 609 2026 60 73 3 chr2RHet 3159368 3159669 -129092 + Gypsy10_I LTR Gypsy 1781 2102 -3176 2 609 2491 57 54 3 chr2RHet 3159671 3160022 -128739 + Gypsy10_I LTR Gypsy 2382 2750 -2528 2 609 3378 156 78 5 chr2RHet 3160024 3160799 -127962 + Gypsy10_I LTR Gypsy 3383 4640 -1648 2 609 922 126 5 14 chr2RHet 3160799 3160989 -127772 + Gypsy10_I LTR Gypsy 4150 4288 -990 2 609 247 30 0 0 chr2RHet 3160987 3161020 -127741 + Gypsy10_I LTR Gypsy 4634 4666 -612 2 609 710 129 32 6 chr2RHet 3161021 3161178 -127583 + Gypsy10_I LTR Gypsy 4665 4772 -506 2 609 1192 91 16 0 chr2RHet 3161175 3161361 -127400 + Gypsy10_I LTR Gypsy 4992 5180 -98 2 609 471 96 0 98 chr2RHet 3161482 3161574 -127187 + Gypsy10_I LTR Gypsy 5196 5278 0 2 609 2794 49 0 3 chr2RHet 3161574 3161939 -126822 + Gypsy10_LTR LTR Gypsy 1 364 0 2 609 344 22 22 0 chr2RHet 3161939 3161984 -126777 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 609 21 95 0 0 chr2RHet 3164410 3164473 -124288 + AT_rich Low_complexity Low_complexity 1 63 0 2 609 205 226 16 16 chr2RHet 3164531 3164594 -124167 + (CATA)n Simple_repeat Simple_repeat 4 66 0 2 609 535 271 298 19 chr2RHet 3165412 3165788 -122973 + IDEFIX_I LTR Gypsy 19 499 -5129 2 609 4488 205 75 53 chr2RHet 3165905 3167180 -121581 + IDEFIX_I LTR Gypsy 1379 2680 -2948 2 609 1638 243 7 35 chr2RHet 3167177 3167715 -121046 + IDEFIX_I LTR Gypsy 3164 3686 -1942 2 609 2390 57 25 0 chr2RHet 3168110 3168426 -120335 + Mariner2_DM DNA Tc1 1 324 -588 2 609 527 176 179 63 chr2RHet 3168755 3169103 -119658 - DNAREP1_DM LINE Penelope -82 512 5 2 609 25 31 0 0 chr2RHet 3169390 3169422 -119339 + AT_rich Low_complexity Low_complexity 1 32 0 2 609 272 241 62 9 chr2RHet 3170306 3170419 -118342 - DNAREP1_DM LINE Penelope -293 301 183 2 609 3319 107 23 33 chr2RHet 3170483 3171082 -117679 + DMCR1A LINE CR1 7 599 -3871 2 609 8300 51 26 12 chr2RHet 3171079 3172200 -116561 + DMCR1A LINE CR1 778 1914 -2556 2 609 40 0 0 0 chr2RHet 3172202 3172242 -116519 + AT_rich Low_complexity Low_complexity 1 40 0 2 609 3104 88 88 18 chr2RHet 3172242 3172753 -116008 + DMCR1A LINE CR1 2423 2969 -1501 2 609 314 267 22 7 chr2RHet 3172826 3172962 -115799 + DNAREP1_DM LINE Penelope 112 249 -345 2 609 481 125 104 0 chr2RHet 3173096 3173192 -115569 - DNAREP1_DM LINE Penelope -348 246 141 2 609 291 133 0 0 chr2RHet 3173635 3173680 -115081 + DNAREP1_DM LINE Penelope 9 53 -541 2 609 2665 29 80 0 chr2RHet 3173707 3174057 -114704 + ROOA_LTR LTR Pao 9 386 0 2 609 535 138 43 0 chr2RHet 3174057 3174172 -114589 + DNAREP1_DM LINE Penelope 52 171 -423 2 609 1308 127 51 54 chr2RHet 3174252 3174528 -114233 + DNAREP1_DM LINE Penelope 320 594 0 2 609 23 33 0 0 chr2RHet 3174588 3174618 -114143 + AT_rich Low_complexity Low_complexity 1 30 0 2 609 428 125 0 0 chr2RHet 3175409 3175484 -113277 - DNAREP1_DM LINE Penelope -25 569 501 2 609 929 112 172 26 chr2RHet 3175489 3175797 -112964 - DNAREP1_DM LINE Penelope -218 376 24 2 609 517 114 443 11 chr2RHet 3175912 3176088 -112673 - DNAREP1_DM LINE Penelope -159 435 184 2 609 545 163 248 0 chr2RHet 3176107 3176248 -112513 - MARINA DNA Mariner -599 668 493 2 609 3957 145 58 41 chr2RHet 3176271 3177255 -111506 + PROTOP_A DNA P 1 1001 -104 2 609 4493 41 66 48 chr2RHet 3177270 3178014 -110747 + PROTOP_A DNA P 349 1105 0 2 609 379 119 0 0 chr2RHet 3178437 3178496 -110265 + DNAREP1_DM LINE Penelope 1 59 -535 2 609 28 0 0 0 chr2RHet 3179932 3179960 -108801 + AT_rich Low_complexity Low_complexity 1 28 0 2 609 1441 128 57 3 chr2RHet 3180642 3180924 -107837 - DNAREP1_DM LINE Penelope -297 297 1 2 609 22 56 0 0 chr2RHet 3181511 3181547 -107214 + AT_rich Low_complexity Low_complexity 1 36 0 2 609 856 134 5 5 chr2RHet 3181661 3181849 -106912 + S_DM DNA Tc1 1549 1736 0 2 609 392 103 0 0 chr2RHet 3181876 3181934 -106827 - FB4_DM DNA Tc1 -3014 1075 1018 2 609 418 88 44 0 chr2RHet 3182225 3182293 -106468 - DNAREP1_DM LINE Penelope -2 592 522 2 609 406 149 0 0 chr2RHet 3182290 3182357 -106404 - Gypsy_LTR LTR Gypsy -415 67 1 2 609 6677 118 19 1 chr2RHet 3182357 3183384 -105377 - Gypsy_I LTR Gypsy 0 6507 5463 2 609 231 139 0 0 chr2RHet 3183385 3183428 -105333 + G6_DM LINE Jockey 1 43 -1999 2 609 341 232 35 35 chr2RHet 3184608 3184751 -104010 + G2_DM LINE Jockey 279 421 -2681 2 609 234 127 146 0 chr2RHet 3184936 3184991 -103770 + G2_DM LINE Jockey 669 731 -2371 2 609 884 323 19 19 chr2RHet 3185923 3186456 -102305 + G2_DM LINE Jockey 1701 2233 -869 2 609 4339 187 54 2 chr2RHet 3186708 3187755 -101006 - Gypsy_I LTR Gypsy -2636 3871 2633 2 609 694 118 5 0 chr2RHet 3187747 3187856 -100905 - Gypsy_I LTR Gypsy -3958 2549 2456 2 609 558 129 0 0 chr2RHet 3187860 3187953 -100808 - Gypsy_I LTR Gypsy -4636 1871 1779 2 609 1345 83 43 30 chr2RHet 3187945 3188244 -100517 - DMSAT6 Satellite Satellite -61 409 107 2 609 1718 138 60 20 chr2RHet 3188240 3188588 -100173 - Gypsy_I LTR Gypsy -4725 1782 1421 2 609 2184 68 0 22 chr2RHet 3188575 3188890 -99871 - BS2 LINE Jockey -316 4405 4098 2 609 1362 41 0 0 chr2RHet 3188864 3189034 -99727 - PROTOP_B DNA P -983 170 1 2 609 1061 199 104 7 chr2RHet 3189600 3189898 -98863 - DNAREP1_DM LINE Penelope -266 328 2 2 609 1258 161 159 14 chr2RHet 3189915 3190286 -98475 - DMCR1A LINE CR1 -3148 1322 898 2 609 34 24 0 0 chr2RHet 3190397 3190438 -98323 + AT_rich Low_complexity Low_complexity 1 41 0 2 609 233 188 0 0 chr2RHet 3190733 3190781 -97980 - G2_DM LINE Jockey -1034 2068 2021 2 609 388 308 57 28 chr2RHet 3190774 3191021 -97740 - LINEJ1_DM LINE Jockey -1254 3766 3513 2 609 5699 78 55 9 chr2RHet 3191152 3192178 -96583 + DMCR1A LINE CR1 38 1183 -3287 2 609 8942 60 163 5 chr2RHet 3192176 3193769 -94992 + BS LINE Jockey 3275 5118 -8 2 609 466 232 26 35 chr2RHet 3193768 3193884 -94877 + HELENA LINE Jockey 418 532 -129 2 609 995 130 0 74 chr2RHet 3193880 3194096 -94665 - DNAREP1_DM LINE Penelope -381 213 14 2 609 5728 33 6 0 chr2RHet 3194484 3195207 -93554 + HELENA_RT LINE Jockey 252 978 -339 2 609 7393 63 37 23 chr2RHet 3195243 3196353 -92408 + TRANSIB2 DNA Transib 87 1211 -1633 2 609 1509 54 5 0 chr2RHet 3196350 3196554 -92207 + TRANSIB2 DNA Transib 1392 1596 -1248 2 609 3136 67 92 37 chr2RHet 3196543 3197052 -91709 + TRANSIB2 DNA Transib 1698 2234 -610 2 609 1178 54 0 12 chr2RHet 3197101 3197270 -91491 + TRANSIB2 DNA Transib 2333 2499 -345 2 609 24 32 0 0 chr2RHet 3197735 3197766 -90995 + AT_rich Low_complexity Low_complexity 1 31 0 2 609 1978 120 121 51 chr2RHet 3198018 3198672 -90089 + DNAREP1_DM LINE Penelope 24 594 0 2 609 203 0 37 0 chr2RHet 3198908 3198935 -89826 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 2 609 227 250 143 0 chr2RHet 3201046 3201158 -87603 - PROTOP DNA P -2884 1596 1469 2 609 245 128 39 0 chr2RHet 3201162 3201240 -87521 - PROTOP DNA P -3790 690 609 2 609 1178 118 79 28 chr2RHet 3201257 3201510 -87251 + DNAREP1_DM LINE Penelope 1 266 -328 2 609 906 88 269 21 chr2RHet 3201526 3201712 -87049 + DNAREP1_DM LINE Penelope 363 594 0 2 609 5919 42 13 9 chr2RHet 3201731 3202576 -86185 + PROTOP DNA P 1 782 -3698 2 609 1254 122 10 0 chr2RHet 3202597 3202794 -85967 - DMCR1A LINE CR1 -1459 3011 2813 2 609 383 89 0 0 chr2RHet 3202806 3202862 -85899 - DMCR1A LINE CR1 -3303 1167 1112 2 609 776 186 232 4 chr2RHet 3202876 3203135 -85626 - DMCR1A LINE CR1 -3883 587 270 2 609 216 0 0 0 chr2RHet 3203576 3203600 -85161 + (A)n Simple_repeat Simple_repeat 1 24 0 2 609 41 58 0 0 chr2RHet 3203639 3203708 -85053 + AT_rich Low_complexity Low_complexity 1 69 0 2 609 262 143 104 0 chr2RHet 3203736 3203813 -84948 - DMCR1A LINE CR1 -4239 231 147 2 609 32137 56 17 6 chr2RHet 3203818 3208492 -80269 - DOC2_DM LINE Jockey -32 4693 1 2 609 1421 117 168 15 chr2RHet 3209591 3210075 -78686 - PROTOP_A DNA P -87 1018 680 2 609 542 126 25 78 chr2RHet 3210076 3210317 -78444 - PROTOP_A DNA P -3677 803 439 2 609 27 49 0 0 chr2RHet 3210515 3210556 -78205 + AT_rich Low_complexity Low_complexity 1 41 0 2 609 620 176 296 3 chr2RHet 3210618 3210940 -77821 + DNAREP1_DM LINE Penelope 115 530 -64 2 609 1505 119 233 12 chr2RHet 3213988 3214617 -74144 + DNAREP1_DM LINE Penelope 88 594 0 2 609 27 49 0 0 chr2RHet 3215224 3215265 -73496 + AT_rich Low_complexity Low_complexity 1 41 0 2 609 645 169 245 27 chr2RHet 3215769 3216102 -72659 - DMCR1A LINE CR1 -1107 3363 2958 2 609 1054 121 44 0 chr2RHet 3216108 3216290 -72471 - DMCR1A LINE CR1 -2103 2367 2178 2 609 1182 227 92 11 chr2RHet 3216310 3216657 -72104 - DMCR1A LINE CR1 -2404 2066 1692 2 609 249 49 0 0 chr2RHet 3216675 3216716 -72045 - DMCR1A LINE CR1 -3226 1244 1204 2 609 601 145 8 53 chr2RHet 3216866 3216997 -71764 - Gypsy2_LTR LTR Gypsy -147 206 82 2 609 620 111 64 9 chr2RHet 3217029 3217138 -71623 - DMCR1A LINE CR1 -3271 1199 1085 2 609 4394 31 38 0 chr2RHet 3217192 3217766 -70995 - ROOA_I LTR Pao -882 5967 5372 2 609 237 135 0 0 chr2RHet 3217999 3218036 -70725 - ROOA_I LTR Pao -1246 5603 5567 2 609 7176 42 5 1 chr2RHet 3218264 3219187 -69574 - ROOA_I LTR Pao -1503 5346 4420 2 609 4705 40 27 11 chr2RHet 3219177 3219803 -68958 - ROOA_I LTR Pao -2581 4268 3633 2 609 40537 1 0 0 chr2RHet 3219804 3224498 -64263 - FW_DM LINE Jockey 0 4692 1 2 609 22720 44 89 56 chr2RHet 3224510 3228037 -60724 - ROOA_I LTR Pao -3206 3643 1 2 609 877 52 0 0 chr2RHet 3228037 3228153 -60608 - ROOA_LTR LTR Pao 0 386 271 2 609 271 197 16 0 chr2RHet 3230836 3230897 -57864 - DMCR1A LINE CR1 -1882 2588 2527 2 609 2262 184 118 9 chr2RHet 3230899 3231432 -57329 - DMCR1A LINE CR1 -2302 2168 1578 2 609 4389 46 72 34 chr2RHet 3231421 3232074 -56687 + PROTOP DNA P 2954 3631 -849 2 609 412 85 0 0 chr2RHet 3232070 3232129 -56632 + PROTOP_A DNA P 738 796 -309 2 609 1692 82 21 4 chr2RHet 3232146 3232379 -56382 + PROTOP DNA P 4237 4479 -1 2 609 320 314 22 0 chr2RHet 3232988 3233125 -55636 + NOMAD_I LTR Gypsy 5419 5558 -1014 2 609 211 232 30 20 chr2RHet 3233185 3233286 -55475 + A-rich Low_complexity Low_complexity 2 103 0 2 609 22 0 0 0 chr2RHet 3233492 3233514 -55247 + AT_rich Low_complexity Low_complexity 1 22 0 2 609 250 272 97 11 chr2RHet 3233654 3233747 -55014 - Gypsy6_LTR LTR Gypsy -143 264 164 2 609 1411 149 44 24 chr2RHet 3234697 3234993 -53768 + DNAREP1_DM LINE Penelope 1 302 -292 2 609 348 141 25 13 chr2RHet 3234969 3235048 -53713 + DNAREP1_DM LINE Penelope 192 271 -323 2 609 849 113 49 0 chr2RHet 3235173 3235315 -53446 - DOC LINE Jockey -3009 1716 1568 2 609 2718 112 88 12 chr2RHet 3235311 3235798 -52963 - DOC LINE Jockey -3631 1094 571 2 609 2701 51 0 0 chr2RHet 3235790 3236123 -52638 + G5_DM LINE Jockey 4445 4777 -79 2 609 1235 112 20 0 chr2RHet 3236122 3236318 -52443 - DOC LINE Jockey -3968 757 558 2 609 332 154 0 0 chr2RHet 3236921 3236973 -51788 + DMCR1A LINE CR1 619 670 -3800 2 609 263 206 15 60 chr2RHet 3237023 3237090 -51671 + DMCR1A LINE CR1 1029 1092 -3378 2 609 682 134 0 0 chr2RHet 3237102 3237214 -51547 + DMCR1A LINE CR1 1191 1302 -3168 2 609 1333 214 33 13 chr2RHet 3237268 3237571 -51190 + DMCR1A LINE CR1 1639 1947 -2523 2 609 4050 61 19 0 chr2RHet 3237577 3238098 -50663 + G5_DM LINE Jockey 2873 3403 -1453 2 609 9461 58 18 1 chr2RHet 3238104 3239385 -49376 + G5_DM LINE Jockey 3515 4856 0 2 609 460 169 667 17 chr2RHet 3239393 3239622 -49139 + DMCR1A LINE CR1 2001 2380 -2090 2 609 27 0 0 0 chr2RHet 3239671 3239698 -49063 + AT_rich Low_complexity Low_complexity 1 27 0 2 609 311 266 2 0 chr2RHet 3239712 3239807 -48954 + Gypsy2_I LTR Gypsy 2758 2834 -3301 2 609 241 312 0 0 chr2RHet 3239897 3239974 -48787 - DIVER2_I LTR Pao -1385 2762 2686 2 609 3493 5 7 10 chr2RHet 3239999 3240414 -48347 - DM297_LTR LTR Gypsy 0 414 1 2 609 2917 11 0 3 chr2RHet 3240414 3240766 -47995 - DM297_I LTR Gypsy 0 6167 5817 2 609 13317 5 1 1 chr2RHet 3240765 3242314 -46447 - DM297_I LTR Gypsy -4618 1549 1 2 609 3493 5 7 10 chr2RHet 3242314 3242729 -46032 - DM297_LTR LTR Gypsy 0 414 1 2 609 933 105 106 37 chr2RHet 3243339 3243538 -45223 + Gypsy8_LTR LTR Gypsy 1 304 0 2 609 1245 148 0 37 chr2RHet 3243538 3243783 -44978 + Gypsy8_I LTR Gypsy 1 236 -4111 2 609 412 183 17 17 chr2RHet 3244519 3244636 -44125 - DMCR1A LINE CR1 -4279 191 75 2 609 485 35 0 0 chr2RHet 3244679 3244737 -44024 - ROOA_LTR LTR Pao 0 386 329 2 609 841 11 0 0 chr2RHet 3244743 3244837 -43924 - ROOA_I LTR Pao -7 6842 6749 2 609 9510 191 103 113 chr2RHet 3244836 3249105 -39656 - ROOA_I LTR Pao -309 6540 2316 2 609 934 127 35 14 chr2RHet 3251820 3252019 -36742 + Gypsy8_LTR LTR Gypsy 1 304 0 2 609 1268 144 0 37 chr2RHet 3252019 3252264 -36497 + Gypsy8_I LTR Gypsy 1 236 -4111 2 609 412 183 17 17 chr2RHet 3253000 3253117 -35644 - DMCR1A LINE CR1 -4279 191 75 2 609 485 35 0 0 chr2RHet 3253160 3253218 -35543 - ROOA_LTR LTR Pao 0 386 329 2 609 27969 134 88 80 chr2RHet 3253224 3260017 -28744 - ROOA_I LTR Pao -7 6842 1 2 609 888 60 0 0 chr2RHet 3260017 3260133 -28628 - ROOA_LTR LTR Pao 0 386 271 2 609 271 197 16 0 chr2RHet 3263081 3263142 -25619 - DMCR1A LINE CR1 -1882 2588 2527 2 609 779 135 229 5 chr2RHet 3263144 3263332 -25429 - DMCR1A LINE CR1 -2302 2168 1939 2 609 404 318 29 33 chr2RHet 3263702 3263943 -24818 + NOMAD_I LTR Gypsy 3319 3558 -3014 2 609 319 239 59 83 chr2RHet 3264087 3264256 -24505 - HELENA LINE Jockey -1 660 496 2 609 4497 54 33 0 chr2RHet 3264253 3264831 -23930 - HELENA_RT LINE Jockey -23 1294 698 2 609 2186 30 67 0 chr2RHet 3264831 3265100 -23661 + Gypsy4_LTR LTR Gypsy 1 287 0 2 609 5919 129 23 4 chr2RHet 3265100 3266151 -22610 - HELENA_RT LINE Jockey -616 701 1 2 609 2203 300 66 11 chr2RHet 3266135 3267009 -21752 - HELENA_RT LINE Jockey -2186 2940 2019 2 609 2068 262 30 16 chr2RHet 3267223 3267916 -20845 - HELENA_RT LINE Jockey -3434 1692 990 2 609 418 265 32 106 chr2RHet 3268273 3268556 -20205 - HELENA_RT LINE Jockey -4856 270 9 2 609 6508 48 110 0 chr2RHet 3268562 3269468 -19293 - QUASIMODO_I LTR Gypsy -2585 3475 2470 2 609 2993 6 0 0 chr2RHet 3269468 3269798 -18963 - TRANSPAC_LTR LTR Gypsy 0 330 1 2 609 40329 2 0 0 chr2RHet 3269797 3274388 -14373 - TRANSPAC_I LTR Gypsy 0 4590 1 2 609 2993 6 0 0 chr2RHet 3274388 3274718 -14043 - TRANSPAC_LTR LTR Gypsy 0 330 1 2 609 3336 50 0 0 chr2RHet 3274718 3275136 -13625 - QUASIMODO_I LTR Gypsy -3587 2473 2056 2 609 9686 63 35 1 chr2RHet 3275132 3276436 -12325 - QUASIMODO_I LTR Gypsy -4713 1347 1 2 76 5004 45 26 9 chr2RHet 3276436 3277038 -11723 - QUASIMODO_LTR LTR Gypsy 0 658 40 2 610 213 39 0 0 chr2RHet 3277038 3277064 -11697 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 610 5004 45 26 9 chr2RHet 3277064 3277108 -11653 - QUASIMODO_LTR LTR Gypsy -619 39 1 2 610 2557 286 42 19 chr2RHet 3277823 3279072 -9689 - QUASIMODO_I LTR Gypsy -117 5943 4666 2 610 1045 238 100 12 chr2RHet 3279106 3279555 -9206 - QUASIMODO_I LTR Gypsy -1469 4591 3998 2 610 3931 0 0 0 chr2RHet 3279579 3280007 -8754 + ROO_LTR LTR Pao 1 428 0 2 610 73116 1 1 2 chr2RHet 3280007 3288265 -496 + ROO_I LTR Pao 1 8256 0 2 610 3931 0 0 0 chr2RHet 3288265 3288693 -68 + ROO_LTR LTR Pao 1 428 0 2 610 326 194 0 0 chr2RHet 3288693 3288755 -6 - QUASIMODO_I LTR Gypsy -1985 3978 3917 2 585 16508 0 1 0 chr2R 0 1938 -21144770 + ROO_I LTR Pao 6318 8256 0 1 585 3766 0 0 0 chr2R 1938 2366 -21144342 + ROO_LTR LTR Pao 1 428 0 1 585 516 200 0 9 chr2R 2366 2482 -21144226 - TV1I LTR Gypsy -1985 3978 3864 1 585 722 309 50 37 chr2R 2481 3075 -21143633 - QUASIMODO_I LTR Gypsy -5069 991 390 1 585 22 0 0 0 chr2R 3367 3389 -21143319 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 1334 313 30 31 chr2R 3425 4368 -21142340 + HMSBEAGLE_I LTR Gypsy 4838 5779 -750 1 585 2297 0 0 0 chr2R 4529 4805 -21141903 + Copia_LTR LTR Copia 1 276 0 1 585 39271 1 0 0 chr2R 4805 9399 -21137309 + Copia_I LTR Copia 1 4593 0 1 585 2297 0 0 0 chr2R 9399 9675 -21137033 + Copia_LTR LTR Copia 1 276 0 1 585 21 0 0 0 chr2R 9699 9720 -21136988 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 185 0 40 0 chr2R 10042 10067 -21136641 + (CATAT)n Simple_repeat Simple_repeat 5 30 0 1 585 560 186 32 63 chr2R 10115 10304 -21136404 + ROVER-LTR_DM LTR Gypsy 185 367 0 1 585 1157 54 0 0 chr2R 10429 10577 -21136131 + PROTOP DNA P 4333 4480 0 1 585 7742 192 38 4 chr2R 10577 12279 -21134429 + ROVER-I_DM LTR Gypsy 2668 5000 -1584 1 585 1469 62 4 0 chr2R 12279 12505 -21134203 - S_DM DNA Tc1 0 1736 1510 1 585 679 24 0 0 chr2R 12508 12591 -21134117 - Gypsy2_I LTR Gypsy -1504 4631 4549 1 585 20630 96 20 17 chr2R 12588 16234 -21130474 - Gypsy2_I LTR Gypsy -1912 5100 1399 1 585 8545 34 36 5 chr2R 16231 17341 -21129367 - Gypsy2_I LTR Gypsy -4991 1144 1 1 585 2808 48 0 0 chr2R 17341 17694 -21129014 - Gypsy2_LTR LTR Gypsy 0 353 1 1 585 2169 89 34 53 chr2R 17711 18124 -21128584 - DM297_LTR LTR Gypsy -9 405 1 1 585 882 182 11 0 chr2R 18124 18316 -21128392 + DNAREP1_DM LINE Penelope 28 348 -246 1 585 28 29 0 0 chr2R 18523 18558 -21128150 + AT_rich Low_complexity Low_complexity 1 35 0 1 585 25 0 0 0 chr2R 20228 20253 -21126455 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 277 98 0 0 chr2R 20689 20730 -21125978 + PROTOP DNA P 4438 4479 -1 1 585 882 144 42 53 chr2R 20758 20948 -21125760 + Gypsy2_LTR LTR Gypsy 1 188 -165 1 585 1537 99 129 41 chr2R 21299 21593 -21125115 + DNAREP1_DM LINE Penelope 275 594 0 1 585 236 103 0 0 chr2R 21706 21745 -21124963 + FB4_DM DNA Tc1 327 365 -3724 1 585 2418 113 93 10 chr2R 21753 22237 -21124471 - FB4_DM DNA Tc1 -3550 539 16 1 585 1046 274 138 39 chr2R 23652 24354 -21122354 + IDEFIX_I LTR Gypsy 1591 2349 -3279 1 585 501 305 35 35 chr2R 24366 24736 -21121972 + TV1I LTR Gypsy 2953 3322 -2641 1 585 538 292 10 10 chr2R 25598 25792 -21120916 - BEL_I LTR Pao -330 5074 4881 1 585 482 114 0 0 chr2R 26798 26868 -21119840 + BEL_I LTR Pao 128 197 -5207 1 585 1103 283 100 8 chr2R 26884 27365 -21119343 + BEL_I LTR Pao 325 849 -4555 1 585 2292 293 77 14 chr2R 27374 28857 -21117851 + BEL_I LTR Pao 2229 3879 -1525 1 585 1685 5 0 0 chr2R 29493 29691 -21117017 - Copia2_LTR_DM LTR Copia 0 198 1 1 585 13528 15 12 0 chr2R 29691 31311 -21115397 - Copia2_I LTR Copia 0 4162 2524 1 585 11903 9 37 0 chr2R 31304 33557 -21113151 - Copia2_I LTR Copia -1825 2337 1 1 585 1690 0 0 0 chr2R 33560 33757 -21112951 - Copia2_LTR_DM LTR Copia -1 197 1 1 585 13528 15 12 0 chr2R 33757 35377 -21111331 - Copia2_I LTR Copia 0 4162 2524 1 585 11903 9 37 0 chr2R 35370 37623 -21109085 - Copia2_I LTR Copia -1825 2337 1 1 585 1460 0 0 0 chr2R 37626 37795 -21108913 - Copia2_LTR_DM LTR Copia -1 197 29 1 585 2985 9 0 0 chr2R 37795 38141 -21108567 + Invader4_LTR LTR Gypsy 1 346 0 1 585 2176 312 63 40 chr2R 39040 40677 -21106031 + Gypsy4_I LTR Gypsy 677 2351 -3937 1 585 2387 284 27 20 chr2R 40669 41607 -21105101 + Gypsy4_I LTR Gypsy 2554 3497 -2791 1 585 508 288 8 14 chr2R 41694 41973 -21104735 + Gypsy4_I LTR Gypsy 3868 4299 -1989 1 585 554 237 13 0 chr2R 42009 42161 -21104547 + Gypsy4_I LTR Gypsy 4592 4745 -1543 1 585 465 316 49 22 chr2R 42265 42673 -21104035 + Gypsy4_I LTR Gypsy 4903 5321 -967 1 585 388 351 58 18 chr2R 42690 43142 -21103566 + Gypsy4_I LTR Gypsy 5363 5832 -456 1 585 445 311 0 0 chr2R 43882 44046 -21102662 + BEL_I LTR Pao 4077 4240 -1164 1 585 262 130 0 0 chr2R 44056 44102 -21102606 + G6_DM LINE Jockey 1997 2042 0 1 585 701 183 77 11 chr2R 44162 44344 -21102364 + BS2 LINE Jockey 54 247 -4474 1 585 25 0 0 0 chr2R 44404 44429 -21102279 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 781 228 155 28 chr2R 44544 44869 -21101839 + G6_DM LINE Jockey 302 667 -1375 1 585 2324 153 61 0 chr2R 44869 45295 -21101413 + G_DM LINE Jockey 1152 1603 -2743 1 585 1269 132 5 9 chr2R 45304 45526 -21101182 + G_DM LINE Jockey 1938 2158 -2188 1 585 1066 155 65 0 chr2R 45526 45726 -21100982 + G_DM LINE Jockey 1577 1789 -2557 1 585 608 181 172 18 chr2R 45715 45878 -21100830 + G_DM LINE Jockey 2571 2758 -1588 1 585 2969 140 72 0 chr2R 45889 46418 -21100290 + G_DM LINE Jockey 2830 3396 -950 1 585 183 114 0 0 chr2R 47163 47198 -21099510 + (T)n Simple_repeat Simple_repeat 1 35 0 1 585 332 215 13 0 chr2R 47541 47620 -21099088 + BEL_I LTR Pao 2660 2739 -2665 1 585 1288 166 135 29 chr2R 48051 48399 -21098309 + Gypsy_LTR LTR Gypsy 4 388 -94 1 585 584 300 103 26 chr2R 49472 50163 -21096545 + MICROPIA_I LTR Gypsy 955 1698 -2778 1 585 1224 301 88 17 chr2R 50181 51007 -21095701 + MICROPIA_I LTR Gypsy 1773 2657 -1819 1 585 2266 295 20 18 chr2R 51026 52057 -21094651 + MICROPIA_I LTR Gypsy 2722 3754 -722 1 585 25 31 0 0 chr2R 52503 52535 -21094173 + AT_rich Low_complexity Low_complexity 1 32 0 1 585 2499 109 70 7 chr2R 52561 53002 -21093706 + Invader1_I LTR Gypsy 2718 3186 0 1 585 1986 142 53 31 chr2R 53002 53416 -21093292 + Invader1_LTR LTR Gypsy 1 423 0 1 585 195 65 43 21 chr2R 53434 53481 -21093227 + (TATAA)n Simple_repeat Simple_repeat 2 49 0 1 585 1397 41 127 5 chr2R 53481 53701 -21093007 - TC1_DM DNA Tc1 0 1666 1420 1 585 943 99 33 0 chr2R 53699 53850 -21092858 - TC1_DM DNA Tc1 -1059 607 452 1 585 526 326 47 40 chr2R 54051 54603 -21092105 + DM1731_I LTR Copia 105 660 -3316 1 585 5779 28 25 0 chr2R 54982 55732 -21090976 + PROTOP DNA P 1 769 -3711 1 585 189 26 0 73 chr2R 55732 55773 -21090935 + (TTA)n Simple_repeat Simple_repeat 3 40 0 1 585 310 0 0 0 chr2R 55796 55840 -21090868 + PROTOP DNA P 2397 2440 -2040 1 585 6057 99 35 88 chr2R 55857 56958 -21089750 + MICROPIA_I LTR Gypsy 3391 4432 -44 1 585 1375 35 0 45 chr2R 56958 57137 -21089571 + PROTOP_A DNA P 1 171 -934 1 585 3961 50 132 1 chr2R 57134 57729 -21088979 + PROTOP_A DNA P 543 1105 0 1 585 1062 332 11 8 chr2R 57814 58282 -21088426 + DM1731_I LTR Copia 1203 1671 -2305 1 585 2112 69 210 0 chr2R 58284 58641 -21088067 + DMRT1B LINE R1 2253 2684 -2499 1 585 2642 58 17 0 chr2R 58637 58983 -21087725 + DMRT1B LINE R1 2943 3294 -1889 1 585 4846 71 53 9 chr2R 58967 60182 -21086526 + DMRT1B LINE R1 3427 5181 -2 1 585 583 314 18 0 chr2R 60178 60404 -21086304 + DM1731_I LTR Copia 1909 2138 -1838 1 585 2642 336 54 13 chr2R 60594 61963 -21084745 + DM1731_I LTR Copia 2547 3971 -5 1 585 1602 71 14 0 chr2R 62041 62252 -21084456 - Gypsy6A_LTR LTR Gypsy 0 420 207 1 585 3616 0 0 2 chr2R 62282 62685 -21084023 - STALKER4_LTR LTR Gypsy 0 402 1 1 585 36741 3 0 1 chr2R 62685 66864 -21079844 - STALKER4_I LTR Gypsy 0 6530 2355 1 585 3420 105 2 25 chr2R 66840 67389 -21079319 - STALKER4_I LTR Gypsy -5994 536 1 1 585 3616 0 0 2 chr2R 67389 67792 -21078916 - STALKER4_LTR LTR Gypsy 0 402 1 1 585 909 57 350 0 chr2R 67795 67946 -21078762 - Gypsy6A_LTR LTR Gypsy -216 204 1 1 585 785 315 161 10 chr2R 67948 68438 -21078270 - Gypsy6_I LTR Gypsy 0 7012 6449 1 585 781 314 29 4 chr2R 68449 68721 -21077987 - Gypsy6_I LTR Gypsy -1000 6012 5734 1 585 225 319 0 0 chr2R 68714 68783 -21077925 - GTWIN_I LTR Gypsy -1326 5095 5027 1 585 2069 281 88 19 chr2R 68948 69931 -21076777 - Gypsy6_I LTR Gypsy -2544 4468 2851 1 585 2096 270 29 0 chr2R 70045 70607 -21076101 - Gypsy6_I LTR Gypsy -4137 2875 2300 1 585 248 292 10 40 chr2R 70701 70801 -21075907 - Gypsy6_I LTR Gypsy -4364 1813 1717 1 585 1987 38 3 83 chr2R 70885 71175 -21075533 + MDG3_LTR LTR Gypsy 1 267 0 1 585 3402 8 119 0 chr2R 71174 71670 -21075038 + MDG3_I LTR Gypsy 1 555 -4431 1 585 695 347 30 33 chr2R 71670 72066 -21074642 - Gypsy6_I LTR Gypsy -5631 1381 987 1 585 254 62 0 0 chr2R 72565 72597 -21074111 - Gypsy6A_LTR LTR Gypsy 0 420 389 1 585 21 0 0 0 chr2R 72867 72888 -21073820 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 603 90 56 0 chr2R 73247 73336 -21073372 - PROTOP DNA P -469 4011 3918 1 585 2661 70 190 7 chr2R 73329 73902 -21072806 - PROTOP DNA P -3782 698 90 1 585 678 291 20 12 chr2R 73938 74192 -21072516 + TC1-2_DM DNA Tc1 965 1220 -424 1 585 27 0 0 0 chr2R 74535 74562 -21072146 + AT_rich Low_complexity Low_complexity 1 27 0 1 585 292 85 0 78 chr2R 75785 75836 -21070872 + Gypsy4_LTR LTR Gypsy 118 164 -123 1 585 1425 56 6 0 chr2R 75814 75992 -21070716 + Gypsy4_LTR LTR Gypsy 109 287 0 1 585 457 73 73 0 chr2R 76001 76110 -21070598 + (TA)n Simple_repeat Simple_repeat 1 117 0 1 585 220 133 22 0 chr2R 76122 76167 -21070541 + (TTA)n Simple_repeat Simple_repeat 3 48 0 1 585 29 28 0 0 chr2R 76531 76567 -21070141 + AT_rich Low_complexity Low_complexity 1 36 0 1 585 273 330 67 22 chr2R 77158 77381 -21069327 + QUASIMODO_I LTR Gypsy 379 611 -5449 1 585 2986 41 64 81 chr2R 77483 77939 -21068769 + PROTOP_B DNA P 1 445 -708 1 585 2137 71 24 46 chr2R 77940 78374 -21068334 + PROTOP_B DNA P 647 1050 -103 1 585 610 168 79 112 chr2R 78409 78623 -21068085 - DNAREP1_DM LINE Penelope -370 224 18 1 585 41 48 0 0 chr2R 78630 78692 -21068016 + AT_rich Low_complexity Low_complexity 1 62 0 1 585 1872 27 0 18 chr2R 80873 81098 -21065610 + PROTOP_B DNA P 1 221 -932 1 585 543 73 7 206 chr2R 81087 81123 -21065585 + PROTOP_B DNA P 323 353 -800 1 585 207 0 0 0 chr2R 81123 81146 -21065562 + (TTATA)n Simple_repeat Simple_repeat 2 24 0 1 585 543 73 7 206 chr2R 81146 81264 -21065444 + PROTOP_B DNA P 354 445 -708 1 585 3391 47 72 2 chr2R 81265 81735 -21064973 + PROTOP_B DNA P 651 1153 0 1 585 1752 42 45 24 chr2R 81953 82199 -21064509 - Gypsy7_LTR LTR Gypsy 0 251 1 1 585 890 47 0 0 chr2R 82199 82305 -21064403 - Gypsy7_I LTR Gypsy 0 4984 4879 1 585 24154 31 17 16 chr2R 82404 85412 -21061296 - Gypsy7_I LTR Gypsy -105 4879 1870 1 585 4579 51 47 19 chr2R 85417 86041 -21060667 - Gypsy7_I LTR Gypsy -3277 1707 1067 1 585 6235 26 0 7 chr2R 86039 86788 -21059920 - Gypsy7_I LTR Gypsy -4101 883 140 1 585 1589 65 0 27 chr2R 86797 87020 -21059688 - Gypsy7_LTR LTR Gypsy -34 217 1 1 585 2948 97 117 27 chr2R 87020 87616 -21059092 + PROTOP DNA P 183 832 -3648 1 585 1332 43 31 0 chr2R 87607 87768 -21058940 + PROTOP_B DNA P 988 1153 0 1 585 1215 162 127 8 chr2R 87768 88035 -21058673 - DNAREP1_DM LINE Penelope -20 574 276 1 585 777 32 11 0 chr2R 88115 88210 -21058498 + FB4_DM DNA Tc1 1095 1190 -2899 1 585 3131 93 41 2 chr2R 88206 88671 -21058037 + FB4_DM DNA Tc1 2278 2760 -1329 1 585 316 171 56 28 chr2R 88696 88768 -21057940 + Gypsy3_LTR LTR Gypsy 218 291 -107 1 585 1597 233 61 101 chr2R 88806 89478 -21057230 + Gypsy3_I LTR Gypsy 27 671 -5506 1 585 388 121 0 0 chr2R 90014 90072 -21056636 - Gypsy8_LTR LTR Gypsy -246 58 1 1 585 376 323 0 0 chr2R 90073 90197 -21056511 + DIVER2_I LTR Pao 3578 3701 -446 1 585 990 199 76 18 chr2R 90316 90593 -21056115 + Gypsy3_LTR LTR Gypsy 1 293 -105 1 585 380 220 68 97 chr2R 90723 90960 -21055748 + Gypsy3_I LTR Gypsy 1 230 -5947 1 585 1790 281 69 11 chr2R 91043 91605 -21055103 + Gypsy6_I LTR Gypsy 2155 2749 -4263 1 585 811 109 481 3 chr2R 91606 91804 -21054904 + Gypsy3_I LTR Gypsy 3403 3684 -2493 1 585 1153 150 0 0 chr2R 92329 92509 -21054199 + Gypsy3_I LTR Gypsy 3681 3860 -2317 1 585 5415 201 107 83 chr2R 92533 94008 -21052700 + Gypsy3_I LTR Gypsy 4490 5985 -192 1 585 254 248 9 90 chr2R 94017 94128 -21052580 + Gypsy3_LTR LTR Gypsy 281 382 -16 1 585 6883 308 67 44 chr2R 96280 100517 -21046191 - HMSBEAGLE_I LTR Gypsy -757 5772 1440 1 585 9331 21 2 2 chr2R 100642 101747 -21044961 - PROTOP_A DNA P 0 1105 1 1 585 398 309 70 71 chr2R 101879 102554 -21044154 - Invader3_I LTR Gypsy -1859 3029 2225 1 585 2525 35 3 28 chr2R 102554 102879 -21043829 + NINJA_LTR LTR Pao 1 317 0 1 585 23327 26 1 18 chr2R 102885 105745 -21040963 + NINJA_I LTR Pao 36 2847 -3164 1 585 9415 18 91 1 chr2R 105722 106885 -21039823 + NINJA_I LTR Pao 3999 5266 -745 1 585 38029 11 2 1 chr2R 106884 111389 -21035319 + QUASIMODO_I LTR Gypsy 1551 6060 0 1 585 5286 14 63 0 chr2R 111389 112008 -21034700 + QUASIMODO_LTR LTR Gypsy 1 658 0 1 585 10400 40 47 45 chr2R 112025 112272 -21034436 + BATUMI_I LTR Pao 603 867 -7096 1 585 293 0 27 0 chr2R 112272 112309 -21034399 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 1 585 10400 40 47 45 chr2R 112309 113537 -21033171 + BATUMI_I LTR Pao 868 2080 -5883 1 585 17931 180 11 21 chr2R 113543 118237 -21028471 + BATUMI_I LTR Pao 3197 7836 -78 1 585 1573 52 41 45 chr2R 118320 118562 -21028146 + BATUMI_LTR LTR Pao 32 272 0 1 585 1275 115 0 0 chr2R 118562 118745 -21027963 - Gypsy8_I LTR Gypsy -3585 762 580 1 585 2235 100 6 44 chr2R 118777 119142 -21027566 - Gypsy8_I LTR Gypsy -3758 589 239 1 585 913 164 57 40 chr2R 119634 119862 -21026846 - Gypsy8_I LTR Gypsy -4115 232 1 1 585 653 102 120 0 chr2R 119898 120006 -21026702 - DMRT1C LINE R1 -662 4781 4661 1 585 1801 108 10 14 chr2R 119991 120282 -21026426 - DMRT1C LINE R1 -4032 1411 1122 1 585 6228 56 62 21 chr2R 120272 121125 -21025583 + FW3_DM LINE Jockey 197 1084 -2048 1 585 1113 118 25 51 chr2R 121123 121344 -21025364 + FW3_DM LINE Jockey 1436 1602 -1530 1 585 10980 33 0 0 chr2R 121350 122614 -21024094 + FW3_DM LINE Jockey 1869 3132 0 1 585 959 269 54 19 chr2R 122605 122973 -21023735 + FW_DM LINE Jockey 4146 4586 -139 1 585 246 196 54 0 chr2R 125397 125453 -21021255 + DNAREP1_DM LINE Penelope 267 325 -269 1 585 264 259 72 29 chr2R 126761 126900 -21019808 + G4_DM LINE Jockey 354 498 -3358 1 585 23 78 0 0 chr2R 126972 127023 -21019685 + AT_rich Low_complexity Low_complexity 1 51 0 1 585 890 0 0 51 chr2R 127408 127545 -21019163 + (TA)n Simple_repeat Simple_repeat 1 130 0 1 73 1075 182 116 56 chr2R 130975 131643 -21015065 + DNAREP1_DM LINE Penelope 1 449 -145 1 586 1258 40 0 7 chr2R 131643 131795 -21014913 - PROTOP_B DNA P 0 1153 1003 1 586 838 72 49 28 chr2R 131792 131935 -21014773 - PROTOP_B DNA P -274 879 734 1 586 658 188 60 0 chr2R 131938 132087 -21014621 + MICROPIA_LTR LTR Gypsy 268 425 -51 1 586 5251 83 91 1 chr2R 132064 132934 -21013774 + MICROPIA_I LTR Gypsy 91 1038 -3438 1 586 7748 89 14 0 chr2R 132935 133971 -21012737 + MICROPIA_I LTR Gypsy 1774 2803 -1673 1 586 2030 94 14 10 chr2R 133967 134244 -21012464 + MICROPIA_I LTR Gypsy 3356 3633 -843 1 586 1904 121 46 0 chr2R 134244 134551 -21012157 + MAX_LTR LTR Pao 1 321 0 1 586 2406 56 75 95 chr2R 134551 134865 -21011843 + MAX_I LTR Pao 1 277 -7637 1 586 201 74 0 0 chr2R 134865 134892 -21011816 + (CATATA)n Simple_repeat Simple_repeat 1 27 0 1 586 2406 56 75 95 chr2R 134892 134989 -21011719 + MAX_I LTR Pao 278 404 -7510 1 586 868 105 108 70 chr2R 134991 135176 -21011532 + MAX_I LTR Pao 244 435 -7479 1 586 21 57 0 0 chr2R 135665 135700 -21011008 + AT_rich Low_complexity Low_complexity 1 35 0 1 586 8372 68 102 130 chr2R 135877 137490 -21009218 + MAX_I LTR Pao 557 2125 -5789 1 586 4247 32 24 0 chr2R 137490 137988 -21008720 + MAX_I LTR Pao 2436 2945 -4969 1 586 12408 34 85 22 chr2R 137984 139596 -21007112 + MAX_I LTR Pao 6199 7912 -2 1 586 1957 108 46 0 chr2R 139603 139910 -21006798 + MAX_LTR LTR Pao 1 321 0 1 586 733 12 0 0 chr2R 139910 139992 -21006716 - MAX_LTR LTR Pao -239 82 1 1 586 2227 73 40 0 chr2R 139992 140287 -21006421 + MICROPIA_I LTR Gypsy 2664 2970 -1506 1 586 3759 97 0 8 chr2R 140297 140804 -21005904 + MICROPIA_I LTR Gypsy 3124 3626 -850 1 586 3098 104 26 0 chr2R 140832 141247 -21005461 + MICROPIA_I LTR Gypsy 1935 2360 -2116 1 586 2473 4 0 0 chr2R 141247 141513 -21005195 + Invader2_LTR LTR Gypsy 1 266 0 1 586 39777 8 6 6 chr2R 141513 146082 -21000626 + Invader2_I LTR Gypsy 1 4568 -24 1 586 2227 24 20 0 chr2R 146081 146336 -21000372 + Invader2_LTR LTR Gypsy 7 266 0 1 586 3501 72 5 0 chr2R 146336 146781 -20999927 + MICROPIA_I LTR Gypsy 2357 2803 -1673 1 586 7438 102 12 36 chr2R 146777 147925 -20998783 + MICROPIA_I LTR Gypsy 3356 4476 0 1 586 3157 42 0 0 chr2R 148022 148399 -20998309 + PROTOP_A DNA P 729 1105 0 1 586 474 0 0 18 chr2R 148399 148451 -20998257 + MICROPIA_I LTR Gypsy 4426 4476 0 1 586 813 164 0 14 chr2R 148454 148596 -20998112 + MICROPIA_LTR LTR Gypsy 93 232 -244 1 586 568 197 8 8 chr2R 148615 148733 -20997975 + MICROPIA_LTR LTR Gypsy 359 476 0 1 586 1187 73 169 0 chr2R 148733 148908 -20997800 - PROTOP DNA P -2985 1495 1291 1 586 406 68 0 0 chr2R 149077 149136 -20997572 - ZAM_LTR LTR Gypsy -413 59 1 1 586 228 189 36 36 chr2R 149427 149482 -20997226 + DM1731_I LTR Copia 105 159 -3817 1 586 374 323 37 8 chr2R 149597 149731 -20996977 + DM1731_I LTR Copia 523 660 -3316 1 586 6216 29 25 0 chr2R 150110 150860 -20995848 + PROTOP DNA P 1 769 -3711 1 586 189 26 0 73 chr2R 150860 150901 -20995807 + (TTA)n Simple_repeat Simple_repeat 3 40 0 1 586 335 0 0 0 chr2R 150924 150968 -20995740 + PROTOP DNA P 2397 2440 -2040 1 586 6272 97 35 88 chr2R 150985 152086 -20994622 + MICROPIA_I LTR Gypsy 3391 4432 -44 1 586 1433 30 12 0 chr2R 152086 152255 -20994453 + PROTOP_A DNA P 1 171 -934 1 586 495 60 153 10 chr2R 152252 152404 -20994304 + PROTOP DNA P 544 744 -3736 1 586 2021 26 0 0 chr2R 152402 152628 -20994080 + PROTOP DNA P 4255 4480 0 1 586 863 333 54 10 chr2R 152687 153370 -20993338 + DM1731_I LTR Copia 1180 1892 -2084 1 586 3344 77 106 3 chr2R 153384 154094 -20992614 + DMRT1B LINE R1 1902 2684 -2499 1 586 2431 63 57 0 chr2R 154090 154423 -20992285 + DMRT1B LINE R1 2943 3294 -1889 1 586 1134 69 0 0 chr2R 154407 154551 -20992157 + DMRT1B LINE R1 3427 3570 -1613 1 586 260 239 56 0 chr2R 154559 154630 -20992078 + DM1731_I LTR Copia 2064 2138 -1838 1 586 2191 327 25 15 chr2R 154862 156493 -20990215 + DM1731_I LTR Copia 2293 3975 -1 1 586 2895 79 122 40 chr2R 156655 157198 -20989510 - PROTOP_B DNA P -278 875 289 1 586 21 0 0 0 chr2R 157585 157606 -20989102 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 5166 56 118 5 chr2R 157969 158786 -20987922 + DOC5_DM LINE Jockey 4 913 -3769 1 586 3195 47 30 21 chr2R 158761 159194 -20987514 + DOC5_DM LINE Jockey 1421 1857 -2825 1 586 300 215 35 71 chr2R 159553 159638 -20987070 - Copia_I LTR Copia -72 4521 4440 1 586 24 0 0 0 chr2R 159654 159678 -20987030 + AT_rich Low_complexity Low_complexity 1 24 0 1 586 649 253 0 0 chr2R 159857 160027 -20986681 - Copia_I LTR Copia -263 4330 4161 1 586 5844 201 69 74 chr2R 160027 161651 -20985057 + Gypsy12_LTR LTR Gypsy 1 1626 -710 1 586 207 0 0 0 chr2R 161651 161674 -20985034 + (TAA)n Simple_repeat Simple_repeat 3 25 0 1 586 5844 201 69 74 chr2R 161674 161748 -20984960 + Gypsy12_LTR LTR Gypsy 1627 1691 -645 1 586 9604 49 85 2 chr2R 161753 163124 -20983584 - IVK_DM LINE I -2 5400 3917 1 586 3472 143 27 29 chr2R 163128 163760 -20982948 + Gypsy12_LTR LTR Gypsy 1706 2336 0 1 586 19818 110 53 56 chr2R 163760 167389 -20979319 + Gypsy12_I LTR Gypsy 1 3657 -1889 1 586 8641 101 49 11 chr2R 167385 168702 -20978006 + Gypsy12_I LTR Gypsy 4024 5390 -156 1 586 3476 218 85 81 chr2R 168699 170115 -20976593 + Gypsy12_LTR LTR Gypsy 271 1691 -645 1 586 8935 48 85 2 chr2R 170126 171491 -20975217 - IVK_DM LINE I -8 5394 3917 1 586 3223 123 5 37 chr2R 171547 172121 -20974587 + Gypsy12_LTR LTR Gypsy 1781 2336 0 1 586 303 114 0 0 chr2R 172226 172270 -20974438 + Invader1_I LTR Gypsy 3137 3180 -6 1 586 2218 129 26 28 chr2R 172277 172701 -20974007 + Invader1_LTR LTR Gypsy 1 423 0 1 586 434 302 29 29 chr2R 172817 173124 -20973584 - Copia_I LTR Copia -1488 3105 2799 1 586 1470 303 40 26 chr2R 173399 174281 -20972427 - Copia_I LTR Copia -2292 2301 1408 1 586 756 308 53 30 chr2R 174504 175109 -20971599 - Copia_I LTR Copia -3639 954 336 1 586 286 136 73 29 chr2R 175495 175563 -20971145 + DM176_LTR LTR Gypsy 224 294 -213 1 586 558 149 49 8 chr2R 175769 175891 -20970817 + DMTOM1_LTR LTR Gypsy 284 410 0 1 586 248 157 41 144 chr2R 175891 175988 -20970720 + ROVER-I_DM LTR Gypsy 1 87 -6497 1 586 25 0 0 0 chr2R 176183 176208 -20970500 + AT_rich Low_complexity Low_complexity 1 25 0 1 586 236 177 50 50 chr2R 176438 176539 -20970169 + A-rich Low_complexity Low_complexity 5 105 0 1 586 715 240 0 15 chr2R 176619 176814 -20969894 + ROVER-I_DM LTR Gypsy 908 1099 -5485 1 586 454 264 0 0 chr2R 177059 177207 -20969501 + DM176_I LTR Gypsy 1831 1978 -4442 1 586 1073 215 19 6 chr2R 177269 177592 -20969116 + DM176_I LTR Gypsy 4655 4981 -1439 1 586 1463 163 0 0 chr2R 177595 177889 -20968819 + DM297_I LTR Gypsy 5490 5783 -384 1 586 1275 36 6 6 chr2R 177986 178154 -20968554 - TLD3 Unknown Unknown -3 169 2 1 586 3170 268 53 12 chr2R 178132 179433 -20967275 + ROVER-I_DM LTR Gypsy 2102 3739 -2845 1 586 406 272 48 48 chr2R 179440 179710 -20966998 + DM176_I LTR Gypsy 3738 4007 -2413 1 586 1688 225 24 18 chr2R 179735 180288 -20966420 + DM297_I LTR Gypsy 4179 4734 -1433 1 586 8996 97 76 16 chr2R 180285 182065 -20964643 + DM297_I LTR Gypsy 234 1991 -4176 1 586 1136 60 21 42 chr2R 182415 182607 -20964101 - Gypsy8_I LTR Gypsy -4136 211 24 1 586 1288 56 4 123 chr2R 182616 182859 -20963849 - Gypsy8_I LTR Gypsy -97 4250 4037 1 586 272 296 0 0 chr2R 183146 183227 -20963481 + (CGG)n Simple_repeat Simple_repeat 2 82 0 1 586 2820 45 27 56 chr2R 183234 183684 -20963024 - Gypsy8_I LTR Gypsy -1055 3292 2856 1 586 694 307 53 0 chr2R 183689 183972 -20962736 - OSVALDO_I LTR Gypsy -5921 732 435 1 586 1187 136 0 33 chr2R 185053 185297 -20961411 - Gypsy8_I LTR Gypsy -4111 236 1 1 586 207 253 0 0 chr2R 185651 185730 -20960978 + (CGG)n Simple_repeat Simple_repeat 1 79 0 1 586 2687 117 181 16 chr2R 185744 186313 -20960395 - Gypsy8_I LTR Gypsy -1009 3338 2676 1 586 2369 71 0 9 chr2R 186320 186663 -20960045 - Gypsy8_I LTR Gypsy -2103 2244 1905 1 586 791 115 0 8 chr2R 186662 186793 -20959915 - Gypsy8_I LTR Gypsy -2703 1644 1515 1 586 1128 228 182 11 chr2R 186808 187654 -20959054 - Gypsy8_I LTR Gypsy -3145 1202 699 1 586 241 191 0 0 chr2R 187651 187698 -20959010 + Gypsy5_I LTR Gypsy 4474 4520 -1989 1 586 2885 22 3 0 chr2R 187699 188054 -20958654 - MDG1_LTR LTR Gypsy 0 442 87 1 586 423 100 0 0 chr2R 188054 188124 -20958584 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 586 53270 7 19 3 chr2R 188128 194629 -20952079 - MDG1_I LTR Gypsy -98 6799 1 1 586 2907 20 3 0 chr2R 194629 194984 -20951724 - MDG1_LTR LTR Gypsy 0 442 87 1 586 423 100 0 0 chr2R 194984 195054 -20951654 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 586 3974 236 68 9 chr2R 195071 196917 -20949791 + Gypsy5_I LTR Gypsy 4519 6474 -35 1 586 403 219 0 130 chr2R 196924 197055 -20949653 + Gypsy5_LTR LTR Gypsy 111 224 -206 1 586 2018 123 112 9 chr2R 197807 198450 -20948258 + DNAREP1_DM LINE Penelope 2 579 -15 1 586 269 261 11 11 chr2R 198509 198598 -20948110 + ACCORD2_I LTR Gypsy 4101 4189 -3023 1 586 380 298 40 34 chr2R 198861 199275 -20947433 + Gypsy5_I LTR Gypsy 4371 4539 -1970 1 586 444 108 0 0 chr2R 199877 199942 -20946766 - Gypsy8_I LTR Gypsy -4282 65 1 1 586 1384 125 47 97 chr2R 199942 200262 -20946446 - Gypsy8_LTR LTR Gypsy 0 304 1 1 586 579 214 93 5 chr2R 201011 201204 -20945504 + DMCR1A LINE CR1 4093 4302 -168 1 586 406 63 200 12 chr2R 201206 201286 -20945422 - DNAREP1_DM LINE Penelope 0 594 500 1 586 1315 129 65 117 chr2R 201288 201673 -20945035 - ROVER-LTR_DM LTR Gypsy 0 367 3 1 586 477 68 0 39 chr2R 201673 201747 -20944961 - ROVER-LTR_DM LTR Gypsy -296 71 1 1 586 48818 6 5 28 chr2R 201747 208175 -20938533 - ROVER-I_DM LTR Gypsy 0 6584 1 1 586 1297 132 65 117 chr2R 208175 208560 -20938148 - ROVER-LTR_DM LTR Gypsy 0 367 3 1 586 477 68 0 39 chr2R 208560 208634 -20938074 - ROVER-LTR_DM LTR Gypsy -296 71 1 1 586 1657 112 277 37 chr2R 208810 209253 -20937455 + DNAREP1_DM LINE Penelope 1 549 -45 1 586 21 0 0 0 chr2R 210023 210044 -20936664 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 22 35 0 0 chr2R 210651 210680 -20936028 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 3358 77 89 45 chr2R 210726 211683 -20935025 + PROTOP_B DNA P 1 1105 0 1 586 1037 154 13 38 chr2R 211971 212207 -20934501 + PROTOP_A DNA P 268 497 -608 1 586 314 179 20 60 chr2R 212213 212362 -20934346 + PROTOP_B DNA P 547 689 -464 1 586 288 297 33 39 chr2R 213023 213205 -20933503 - TABOR_I LTR Gypsy -4799 1537 1357 1 586 1825 103 165 6 chr2R 213289 213629 -20933079 - DNAREP1_DM LINE Penelope 0 594 201 1 586 257 248 43 34 chr2R 214552 214669 -20932039 + DNAREP1_DM LINE Penelope 218 335 -259 1 586 1628 127 39 168 chr2R 214893 215376 -20931332 - DNAREP1_DM LINE Penelope -115 479 59 1 586 721 118 181 0 chr2R 215382 215526 -20931182 - DNAREP1_DM LINE Penelope -155 439 270 1 586 850 81 81 0 chr2R 215610 215746 -20930962 + DNAREP1_DM LINE Penelope 7 153 -441 1 586 413 95 32 0 chr2R 215744 215807 -20930901 + DNAREP1_DM LINE Penelope 425 489 -105 1 586 1188 149 244 0 chr2R 215805 216059 -20930649 + DMCR1A LINE CR1 571 886 -3584 1 586 707 104 0 0 chr2R 216312 216418 -20930290 + DMCR1A LINE CR1 977 1082 -3388 1 586 254 57 0 0 chr2R 216421 216456 -20930252 + DMCR1A LINE CR1 2419 2453 -2017 1 586 287 28 0 0 chr2R 217188 217224 -20929484 + DNAREP1_DM LINE Penelope 1 36 -558 1 586 302 140 18 0 chr2R 217225 217282 -20929426 + DMCR1A LINE CR1 4055 4112 -358 1 586 639 127 141 7 chr2R 217325 217460 -20929248 + DMCR1A LINE CR1 4307 4459 -11 1 586 312 111 0 16 chr2R 217894 217958 -20928750 - DNAREP1_DM LINE Penelope -322 272 210 1 586 40568 1 0 0 chr2R 218311 223001 -20923707 + FW_DM LINE Jockey 1 4690 -2 1 586 5436 42 7 0 chr2R 223000 223690 -20923018 + Baggins1 LINE LOA 4759 5453 0 1 586 2347 237 72 11 chr2R 224451 225090 -20921618 + G5_DM LINE Jockey 1587 2264 -2592 1 586 10339 49 19 7 chr2R 225093 226451 -20920257 + G5A_DM LINE Jockey 648 2021 -820 1 586 3217 47 163 14 chr2R 226456 226983 -20919725 + G5A_DM LINE Jockey 2208 2813 -28 1 586 1192 74 235 0 chr2R 227282 227525 -20919183 + PROTOP DNA P 393 692 -3788 1 586 323 109 141 0 chr2R 227537 227601 -20919107 + PROTOP DNA P 1009 1081 -3399 1 586 349 143 16 0 chr2R 227594 227657 -20919051 + PROTOP DNA P 3918 3981 -499 1 586 3283 292 20 23 chr2R 227657 229033 -20917675 + Gypsy4_I LTR Gypsy 3373 4744 -1544 1 586 613 347 42 28 chr2R 229578 230221 -20916487 + Gypsy4_I LTR Gypsy 5173 5824 -464 1 586 1464 120 31 67 chr2R 231070 231533 -20915175 + DNAREP1_DM LINE Penelope 1 573 -21 1 586 1329 114 263 3 chr2R 231532 231840 -20914868 + DNAREP1_DM LINE Penelope 207 594 0 1 586 910 136 0 0 chr2R 231843 231997 -20914711 + Invader3_I LTR Gypsy 2207 2360 -2528 1 586 1877 130 45 11 chr2R 232278 232635 -20914073 + STALKER4_LTR LTR Gypsy 1 369 -33 1 586 693 264 9 0 chr2R 232807 233023 -20913685 + STALKER4_I LTR Gypsy 235 452 -6078 1 586 3689 98 4 2 chr2R 233040 233638 -20913070 + STALKER4_I LTR Gypsy 1657 2336 -4194 1 586 7469 92 95 7 chr2R 233629 234870 -20911838 + Stalker2_I LTR Gypsy 2819 4168 -3234 1 586 4479 120 27 1 chr2R 234874 235617 -20911091 + STALKER4_I LTR Gypsy 5420 6181 -349 1 586 1961 80 132 14 chr2R 235627 235982 -20910726 + DMCR1A LINE CR1 1 397 -4073 1 586 1839 39 0 4 chr2R 235981 236215 -20910493 + DMCR1A LINE CR1 772 1004 -3466 1 586 5018 42 27 0 chr2R 236211 236871 -20909837 + DMCR1A LINE CR1 2858 3535 -935 1 586 3313 72 15 0 chr2R 236872 237332 -20909376 + DMCR1A LINE CR1 4004 4470 0 1 586 564 178 0 0 chr2R 237489 237590 -20909118 - DMCR1A LINE CR1 -3504 966 866 1 586 862 213 102 8 chr2R 237587 237843 -20908865 - DMCR1A LINE CR1 -3992 478 199 1 586 394 117 0 115 chr2R 238794 238881 -20907827 + DNAREP1_DM LINE Penelope 1 77 -517 1 586 376 143 241 0 chr2R 239571 239683 -20907025 + DNAREP1_DM LINE Penelope 210 348 -246 1 586 283 289 13 13 chr2R 239823 239974 -20906734 + TV1I LTR Gypsy 1439 1589 -4374 1 586 3214 242 13 28 chr2R 240297 241272 -20905436 + IDEFIX_I LTR Gypsy 1407 2367 -3261 1 586 3026 268 96 20 chr2R 241273 243428 -20903280 + TV1I LTR Gypsy 3601 6042 -18 1 586 605 116 0 0 chr2R 244027 244122 -20902586 + DNAREP1_DM LINE Penelope 500 594 0 1 586 4896 177 34 9 chr2R 244390 245610 -20901098 - DOC4_DM LINE Jockey -281 4459 2081 1 586 2142 270 110 18 chr2R 245644 247513 -20899195 + QUASIMODO_I LTR Gypsy 3904 6042 -18 1 586 605 116 0 0 chr2R 248112 248207 -20898501 + DNAREP1_DM LINE Penelope 500 594 0 1 586 2956 72 34 0 chr2R 248475 248891 -20897817 - DOC4_DM LINE Jockey -8 2783 2354 1 586 338 47 0 0 chr2R 248889 248932 -20897776 - DOC4_DM LINE Jockey -386 2405 2363 1 586 2073 224 50 19 chr2R 248939 249823 -20896885 - DOC4_DM LINE Jockey -386 2405 2081 1 586 1015 52 473 0 chr2R 250678 250843 -20895865 - Gypsy12A_LTR LTR Gypsy -9 2271 2029 1 586 998 274 30 11 chr2R 251087 251452 -20895256 - DOC LINE Jockey -1134 3591 3220 1 586 14842 20 3 0 chr2R 251557 253362 -20893346 + DMRT1A LINE R1 2576 4386 -797 1 586 5082 25 23 12 chr2R 253357 254003 -20892705 + DMRT1A LINE R1 4527 5179 -4 1 586 8069 121 42 15 chr2R 254257 255777 -20890931 - DOC4_DM LINE Jockey -914 1877 308 1 586 1405 57 284 1 chr2R 255763 256120 -20890588 - DOC4_DM LINE Jockey -2345 446 1 1 586 723 290 56 25 chr2R 256224 256670 -20890038 + ROO_I LTR Pao 3366 3825 -4431 1 586 231 327 6 29 chr2R 256748 256918 -20889790 + ROO_I LTR Pao 4420 4585 -3671 1 586 30 27 0 0 chr2R 256965 257002 -20889706 + AT_rich Low_complexity Low_complexity 1 37 0 1 586 3006 47 0 5 chr2R 257121 257508 -20889200 - DIVER2_LTR LTR Pao 0 385 1 1 586 24216 17 26 1 chr2R 257508 261410 -20885298 - DIVER2_I LTR Pao 0 4147 173 1 586 237 65 0 0 chr2R 261410 261441 -20885267 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 586 24216 14 14 1 chr2R 261441 261583 -20885125 - DIVER2_I LTR Pao -3975 172 2 1 586 3027 44 0 5 chr2R 261583 261970 -20884738 - DIVER2_LTR LTR Pao 0 385 1 1 587 231 232 0 0 chr2R 262176 262232 -20884476 + ROO_I LTR Pao 5265 5320 -2936 1 587 321 248 176 20 chr2R 262551 262699 -20884009 + ROO_I LTR Pao 5316 5486 -2770 1 587 292 306 12 12 chr2R 263168 263340 -20883368 + ROO_I LTR Pao 6369 6540 -1716 1 587 1357 123 140 17 chr2R 264194 264832 -20881876 - DNAREP1_DM LINE Penelope 0 594 1 1 587 534 165 90 64 chr2R 265195 265433 -20881275 - DNAREP1_DM LINE Penelope -203 391 22 1 587 368 215 161 0 chr2R 265625 265755 -20880953 - DNAREP1_DM LINE Penelope -151 443 293 1 587 22 56 0 0 chr2R 265832 265868 -20880840 + AT_rich Low_complexity Low_complexity 1 36 0 1 587 1257 121 9 22 chr2R 266748 266977 -20879731 + DNAREP1_DM LINE Penelope 2 227 -367 1 587 3295 21 45 0 chr2R 266977 267400 -20879308 + MDG1_LTR LTR Gypsy 1 442 0 1 587 54019 7 9 3 chr2R 267400 273955 -20872753 + MDG1_I LTR Gypsy 1 6596 0 1 587 3295 21 45 0 chr2R 273955 274378 -20872330 + MDG1_LTR LTR Gypsy 1 442 0 1 587 2008 116 188 10 chr2R 274378 274799 -20871909 + DNAREP1_DM LINE Penelope 119 594 0 1 587 271 239 43 34 chr2R 274887 275004 -20871704 + DNAREP1_DM LINE Penelope 218 335 -259 1 587 1104 88 134 31 chr2R 275228 275451 -20871257 - DNAREP1_DM LINE Penelope -115 479 234 1 587 1704 147 21 23 chr2R 275445 276089 -20870619 - DNAREP1_DM LINE Penelope -154 440 2 1 587 530 179 310 129 chr2R 276692 276944 -20869764 - DMCR1A LINE CR1 -228 4242 3945 1 587 3896 139 76 4 chr2R 276945 277705 -20869003 - DMCR1A LINE CR1 -1115 3355 2541 1 587 787 187 24 12 chr2R 277703 277871 -20868837 - DMCR1A LINE CR1 -2324 2146 1977 1 587 3050 66 75 2 chr2R 277868 278309 -20868399 + Gypsy10_I LTR Gypsy 1125 1597 -3681 1 587 8701 76 58 23 chr2R 278312 279664 -20867044 + Gypsy10_I LTR Gypsy 1935 3333 -1945 1 587 459 48 16 0 chr2R 279663 279725 -20866983 + Gypsy10_I LTR Gypsy 3717 3779 -1499 1 587 849 197 129 27 chr2R 279742 279998 -20866710 - DMCR1A LINE CR1 -3618 852 571 1 587 413 95 32 0 chr2R 279996 280059 -20866649 - DNAREP1_DM LINE Penelope -105 489 425 1 587 850 81 81 0 chr2R 280057 280193 -20866515 - DNAREP1_DM LINE Penelope -441 153 7 1 587 721 118 181 0 chr2R 280277 280421 -20866287 + DNAREP1_DM LINE Penelope 270 439 -155 1 587 1628 127 39 168 chr2R 280427 280910 -20865798 + DNAREP1_DM LINE Penelope 59 479 -115 1 587 257 248 43 34 chr2R 281134 281251 -20865457 - DNAREP1_DM LINE Penelope -259 335 218 1 587 250 292 11 11 chr2R 281714 281804 -20864904 - DIVER2_I LTR Pao -2701 1446 1357 1 587 1783 103 162 3 chr2R 282174 282514 -20864194 + DNAREP1_DM LINE Penelope 201 594 0 1 587 303 309 5 37 chr2R 282654 282842 -20863866 + TABOR_I LTR Gypsy 1356 1537 -4799 1 587 1005 155 135 48 chr2R 283554 283941 -20862767 - PROTOP_B DNA P -464 689 269 1 587 2412 105 102 16 chr2R 284792 285245 -20861463 + PROTOP DNA P 12 505 -3975 1 587 7185 46 25 70 chr2R 285583 286661 -20860047 + Baggins1 LINE LOA 949 1977 -3476 1 587 8038 37 22 11 chr2R 286667 287715 -20858993 + Baggins1 LINE LOA 2371 3430 -2023 1 587 5244 44 7 6 chr2R 287713 288395 -20858313 + Baggins1 LINE LOA 4058 4740 -713 1 587 708 60 0 39 chr2R 288394 288498 -20858210 + Baggins1 LINE LOA 5224 5323 -130 1 587 713 108 0 43 chr2R 288493 288609 -20858099 + DMRT1C LINE R1 5269 5379 -64 1 587 4900 144 35 1 chr2R 288628 289489 -20857219 + DMRT1B LINE R1 3518 4407 -776 1 587 834 90 103 7 chr2R 289508 289654 -20857054 - Gypsy8_I LTR Gypsy -4184 163 4 1 587 1593 109 6 79 chr2R 289654 289982 -20856726 - Gypsy8_LTR LTR Gypsy 0 304 1 1 587 641 93 258 0 chr2R 289983 290177 -20856531 + PROTOP DNA P 559 803 -3677 1 587 3919 66 43 4 chr2R 290248 291158 -20855550 + DMCR1A LINE CR1 348 1292 -3178 1 587 4169 53 0 13 chr2R 291160 291711 -20854997 + DMCR1A LINE CR1 1640 2183 -2287 1 587 494 68 40 0 chr2R 291709 291783 -20854925 + DMCR1A LINE CR1 2862 2938 -1532 1 587 5935 59 62 5 chr2R 291833 292671 -20854037 + DMCR1A LINE CR1 3345 4230 -240 1 587 868 46 107 0 chr2R 292677 292808 -20853900 + PROTOP DNA P 3912 4056 -424 1 587 395 96 0 0 chr2R 292814 292887 -20853821 + PROTOP_A DNA P 755 827 -278 1 587 2143 153 108 18 chr2R 292974 293467 -20853241 + Gypsy12A_LTR LTR Gypsy 162 698 -1582 1 587 1609 111 29 43 chr2R 293467 293815 -20852893 + Gypsy12A_LTR LTR Gypsy 943 1285 -995 1 587 1097 141 150 5 chr2R 294918 295311 -20851397 - DNAREP1_DM LINE Penelope -8 586 137 1 587 26 50 0 0 chr2R 295554 295594 -20851114 + AT_rich Low_complexity Low_complexity 1 40 0 1 587 342 261 110 27 chr2R 296234 296503 -20850205 + FW_DM LINE Jockey 3350 3687 -1038 1 587 1632 150 156 0 chr2R 296550 296903 -20849805 + DMCR1A LINE CR1 4059 4466 -4 1 587 2707 129 87 20 chr2R 297287 297825 -20848883 + DNAREP1_DM LINE Penelope 21 594 0 1 587 233 135 0 0 chr2R 297823 297860 -20848848 - Invader3_I LTR Gypsy -1146 3742 3706 1 587 435 125 286 0 chr2R 297889 298001 -20848707 - Invader3_I LTR Gypsy -1318 3570 3427 1 587 25 0 0 0 chr2R 298360 298385 -20848323 + AT_rich Low_complexity Low_complexity 1 25 0 1 587 1388 145 25 68 chr2R 298483 298808 -20847900 + DM297_LTR LTR Gypsy 1 311 -103 1 587 795 146 47 62 chr2R 298888 299176 -20847532 + DM297_I LTR Gypsy 92 510 -5657 1 587 3791 129 64 9 chr2R 299170 299915 -20846793 + DM297_I LTR Gypsy 751 1536 -4631 1 587 32 0 0 0 chr2R 299931 299963 -20846745 + AT_rich Low_complexity Low_complexity 1 32 0 1 587 380 116 0 0 chr2R 299963 300032 -20846676 + DM297_I LTR Gypsy 1846 1914 -4253 1 587 2284 38 136 17 chr2R 300034 300379 -20846329 - ROOA_LTR LTR Pao 0 386 1 1 587 329 23 0 43 chr2R 300394 300440 -20846268 - ROOA_I LTR Pao -7 6842 6799 1 587 2931 103 13 11 chr2R 300477 300947 -20845761 - ROOA_I LTR Pao -1503 5346 4966 1 587 4616 31 9 0 chr2R 300949 301526 -20845182 - ROOA_I LTR Pao -2239 4610 4029 1 587 698 200 9 89 chr2R 301541 301766 -20844942 + DM297_LTR LTR Gypsy 190 396 -18 1 587 203 0 37 0 chr2R 301768 301795 -20844913 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1 587 31814 18 15 16 chr2R 302004 305953 -20840755 + Gypsy2_I LTR Gypsy 1864 5807 -328 1 587 778 50 0 0 chr2R 305970 306070 -20840638 + Gypsy2_LTR LTR Gypsy 171 270 -83 1 587 2185 25 0 28 chr2R 306070 306361 -20840347 + BATUMI_I LTR Pao 7002 7284 -679 1 587 1652 95 105 25 chr2R 306361 306675 -20840033 + BATUMI_I LTR Pao 1 339 -7624 1 587 17221 126 102 75 chr2R 306669 310895 -20835813 + BATUMI_I LTR Pao 446 4782 -3181 1 587 616 62 0 0 chr2R 310890 310970 -20835738 + BATUMI_I LTR Pao 5281 5360 -2603 1 587 3317 27 22 13 chr2R 310954 311403 -20835305 - BATUMI_I LTR Pao -1084 6879 6427 1 587 5347 14 0 5 chr2R 311419 312079 -20834629 + BATUMI_I LTR Pao 7307 7963 0 1 587 2022 22 62 22 chr2R 312079 312351 -20834357 + BATUMI_I LTR Pao 7002 7284 -679 1 587 766 0 0 0 chr2R 312350 312439 -20834269 + Gypsy2_LTR LTR Gypsy 265 353 0 1 587 1983 20 31 0 chr2R 312441 312696 -20834012 + Mariner2_DM DNA Tc1 629 891 -21 1 587 319 216 52 35 chr2R 312770 312885 -20833823 - Invader1_LTR LTR Gypsy -238 185 69 1 587 31 0 0 0 chr2R 313310 313341 -20833367 + AT_rich Low_complexity Low_complexity 1 31 0 1 587 27 81 0 0 chr2R 313510 313572 -20833136 + AT_rich Low_complexity Low_complexity 1 62 0 1 587 3155 43 76 19 chr2R 314418 314893 -20831815 - PROTOP_B DNA P 0 1153 652 1 587 3085 43 67 0 chr2R 314894 315313 -20831395 - PROTOP_B DNA P -708 445 1 1 587 27 49 0 0 chr2R 315596 315637 -20831071 + AT_rich Low_complexity Low_complexity 1 41 0 1 587 1321 169 126 50 chr2R 315663 316159 -20830549 + DNAREP1_DM LINE Penelope 88 494 -100 1 587 338 127 0 0 chr2R 316544 316599 -20830109 + DNAREP1_DM LINE Penelope 540 594 0 1 587 379 319 22 0 chr2R 316645 316827 -20829881 - BS2 LINE Jockey -2098 2623 2438 1 587 1282 274 65 14 chr2R 316830 317453 -20829255 - BS2 LINE Jockey -2445 2276 1591 1 587 506 284 34 5 chr2R 317563 317768 -20828940 - BS2 LINE Jockey -3337 1384 1174 1 587 376 239 54 0 chr2R 319052 319182 -20827526 + BS2 LINE Jockey 4484 4620 -101 1 587 663 342 47 42 chr2R 319230 319780 -20826928 + TV1I LTR Gypsy 417 969 -4994 1 587 1295 262 89 10 chr2R 319787 320370 -20826338 + QUASIMODO_I LTR Gypsy 3963 4591 -1469 1 587 2211 287 46 19 chr2R 320404 321649 -20825059 + QUASIMODO_I LTR Gypsy 4666 5943 -117 1 587 4671 49 30 9 chr2R 322351 322395 -20824313 + QUASIMODO_LTR LTR Gypsy 1 39 -619 1 587 195 42 0 0 chr2R 322395 322419 -20824289 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 587 4671 49 30 9 chr2R 322419 323019 -20823689 + QUASIMODO_LTR LTR Gypsy 40 658 0 1 587 500 62 0 0 chr2R 323019 323083 -20823625 + QUASIMODO_I LTR Gypsy 1 64 -5996 1 587 4932 40 15 1 chr2R 323104 323758 -20822950 - PROTOP DNA P -3817 663 1 1 587 6105 99 32 2 chr2R 323758 324718 -20821990 - S_DM DNA Tc1 -747 989 1 1 587 26 30 0 0 chr2R 324749 324782 -20821926 + AT_rich Low_complexity Low_complexity 1 33 0 1 587 1329 319 26 28 chr2R 324950 325893 -20820815 - HMSBEAGLE_I LTR Gypsy -750 5779 4838 1 587 22 0 0 0 chr2R 325929 325951 -20820757 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 753 306 101 42 chr2R 326239 327369 -20819339 + QUASIMODO_I LTR Gypsy 383 1568 -4395 1 587 3223 242 14 27 chr2R 327693 328679 -20818029 + IDEFIX_I LTR Gypsy 1407 2379 -3249 1 587 3023 267 96 21 chr2R 328669 330826 -20815882 + TV1I LTR Gypsy 3599 6042 -18 1 587 605 116 0 0 chr2R 331425 331520 -20815188 + DNAREP1_DM LINE Penelope 500 594 0 1 587 4896 177 34 9 chr2R 331788 333008 -20813700 - DOC4_DM LINE Jockey -281 4459 2081 1 587 1060 256 104 15 chr2R 333057 333588 -20813120 + QUASIMODO_I LTR Gypsy 4014 4591 -1469 1 587 2210 287 46 21 chr2R 333622 334869 -20811839 + QUASIMODO_I LTR Gypsy 4666 5943 -117 1 587 2805 39 70 3 chr2R 335552 335935 -20810773 + DMTOM1_LTR LTR Gypsy 1 409 -1 1 587 221 57 0 28 chr2R 335935 335971 -20810737 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 587 1449 159 156 55 chr2R 335976 336514 -20810194 - DNAREP1_DM LINE Penelope -105 489 2 1 587 338 242 98 91 chr2R 336512 336766 -20809942 - DNAREP1_DM LINE Penelope -338 256 1 1 587 22 0 0 0 chr2R 336907 336929 -20809779 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 344 236 83 24 chr2R 337009 337178 -20809530 + BS2 LINE Jockey 4536 4714 -7 1 587 23708 139 81 79 chr2R 337408 343749 -20802959 - ROOA_I LTR Pao -482 6367 14 1 587 704 52 10 0 chr2R 343751 343847 -20802861 - ROOA_I LTR Pao -6752 97 1 1 587 1434 17 0 0 chr2R 343847 344019 -20802689 - ROOA_LTR LTR Pao 0 386 215 1 587 230 245 40 60 chr2R 344680 344780 -20801928 + I_DM LINE I 4578 4675 -1556 1 587 370 156 0 0 chr2R 345031 345095 -20801613 - Invader3_LTR LTR Gypsy -141 157 94 1 587 451 62 148 12 chr2R 345098 345179 -20801529 - DNAREP1_DM LINE Penelope -502 92 1 1 587 417 233 127 40 chr2R 345181 345409 -20801299 - DNAREP1_DM LINE Penelope -346 248 1 1 587 21 0 0 0 chr2R 346328 346349 -20800359 + AT_rich Low_complexity Low_complexity 1 21 0 1 587 2458 45 0 16 chr2R 346818 347138 -20799570 - G4_DM LINE Jockey -632 3224 2910 1 587 368 129 300 57 chr2R 347135 347275 -20799433 - Gypsy12_I LTR Gypsy -5372 174 1 1 587 357 94 0 0 chr2R 347275 347328 -20799380 - Gypsy12A_LTR LTR Gypsy -7 2273 2221 1 587 1012 91 6 11 chr2R 347328 347505 -20799203 - FB4_DM DNA Tc1 -1329 2760 2585 1 587 6646 116 91 25 chr2R 347506 348767 -20797941 - FB4_DM DNA Tc1 -1639 2450 1107 1 587 559 115 0 40 chr2R 348762 348862 -20797846 + DNAREP1_DM LINE Penelope 499 594 0 1 587 327 197 0 0 chr2R 348886 348957 -20797751 - DNAREP1_DM LINE Penelope -346 248 178 1 587 968 160 19 14 chr2R 348952 349167 -20797541 - DNAREP1_DM LINE Penelope -378 216 1 1 587 6090 95 3 4 chr2R 349409 350341 -20796367 + S_DM DNA Tc1 59 989 -747 1 587 4932 40 15 1 chr2R 350341 350995 -20795713 + PROTOP DNA P 1 663 -3817 1 587 500 62 0 0 chr2R 351016 351080 -20795628 - QUASIMODO_I LTR Gypsy -5996 64 1 1 587 4671 49 30 9 chr2R 351080 351680 -20795028 - QUASIMODO_LTR LTR Gypsy 0 658 40 1 587 213 39 0 0 chr2R 351680 351706 -20795002 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 587 4671 49 30 9 chr2R 351706 351750 -20794958 - QUASIMODO_LTR LTR Gypsy -619 39 1 1 587 3346 283 78 16 chr2R 352452 354318 -20792390 - QUASIMODO_I LTR Gypsy -117 5943 3963 1 587 686 334 36 36 chr2R 354325 354878 -20791830 - TV1I LTR Gypsy -4994 969 417 1 587 22 0 0 0 chr2R 355209 355231 -20791477 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 1329 319 26 28 chr2R 355267 356210 -20790498 + HMSBEAGLE_I LTR Gypsy 4838 5779 -750 1 587 26 30 0 0 chr2R 356378 356411 -20790297 + AT_rich Low_complexity Low_complexity 1 33 0 1 587 10433 101 40 2 chr2R 356442 358110 -20788598 + S_DM DNA Tc1 1 1732 -4 1 587 4925 336 34 25 chr2R 360599 364702 -20782006 - GTWIN_I LTR Gypsy -1694 5318 1202 1 587 287 294 0 0 chr2R 365994 366086 -20780622 - Invader2_I LTR Gypsy -630 3962 3871 1 587 21 36 0 0 chr2R 366394 366422 -20780286 + AT_rich Low_complexity Low_complexity 1 28 0 1 587 1231 149 23 7 chr2R 366664 366902 -20779806 - DMRT1B LINE R1 -90 5093 4810 1 587 580 253 1 1 chr2R 367121 367274 -20779434 - BS2 LINE Jockey -262 4459 4329 1 587 3204 221 69 9 chr2R 367315 368115 -20778593 - BS2 LINE Jockey -944 3777 2930 1 587 499 176 187 49 chr2R 368369 368572 -20778136 + DNAREP1_DM LINE Penelope 72 302 -292 1 587 277 279 58 0 chr2R 369304 369408 -20777300 - NINJA_I LTR Pao -1451 4560 4451 1 587 487 332 76 3 chr2R 369534 369848 -20776860 - NINJA_I LTR Pao -2487 3524 3188 1 587 40745 1 0 1 chr2R 370804 375520 -20771188 + DOC LINE Jockey 11 4723 -2 1 587 2116 109 0 0 chr2R 375816 376129 -20770579 - DMRT1B LINE R1 -2 5181 4869 1 587 1048 228 0 0 chr2R 376368 376587 -20770121 - BS2 LINE Jockey -262 4459 4241 1 587 1656 210 156 10 chr2R 376586 377326 -20769382 - BS2 LINE Jockey -944 3777 2930 1 587 516 266 191 0 chr2R 377586 377821 -20768887 - BS2 LINE Jockey -1844 2877 2598 1 587 514 162 188 38 chr2R 377859 378045 -20768663 + DNAREP1_DM LINE Penelope 89 302 -292 1 587 284 280 56 0 chr2R 378760 378867 -20767841 - NINJA_I LTR Pao -1451 4560 4448 1 587 510 315 83 10 chr2R 378990 379304 -20767404 - NINJA_I LTR Pao -2487 3524 3188 1 587 343 264 0 0 chr2R 379807 379898 -20766810 - Invader2_I LTR Gypsy -630 3962 3872 1 587 21 36 0 0 chr2R 380193 380221 -20766487 + AT_rich Low_complexity Low_complexity 1 28 0 1 587 2150 105 0 0 chr2R 380511 380824 -20765884 - DMRT1B LINE R1 -2 5181 4869 1 587 1003 237 0 0 chr2R 381063 381282 -20765426 - BS2 LINE Jockey -262 4459 4241 1 587 1656 222 110 8 chr2R 381281 382017 -20764691 - BS2 LINE Jockey -1374 3347 2930 1 587 516 266 191 0 chr2R 382277 382512 -20764196 - BS2 LINE Jockey -1844 2877 2598 1 587 514 162 188 38 chr2R 382550 382736 -20763972 + DNAREP1_DM LINE Penelope 89 302 -292 1 587 260 264 65 9 chr2R 383451 383558 -20763150 - NINJA_I LTR Pao -1451 4560 4448 1 587 510 315 83 10 chr2R 383681 383995 -20762713 - NINJA_I LTR Pao -2487 3524 3188 1 587 327 275 0 0 chr2R 384498 384589 -20762119 - Invader2_I LTR Gypsy -630 3962 3872 1 587 21 36 0 0 chr2R 384884 384912 -20761796 + AT_rich Low_complexity Low_complexity 1 28 0 1 587 2116 109 0 0 chr2R 385202 385515 -20761193 - DMRT1B LINE R1 -2 5181 4869 1 587 1017 237 0 0 chr2R 385754 385973 -20760735 - BS2 LINE Jockey -262 4459 4241 1 587 1656 222 110 8 chr2R 385972 386708 -20760000 - BS2 LINE Jockey -1374 3347 2930 1 587 516 266 191 0 chr2R 386968 387203 -20759505 - BS2 LINE Jockey -1844 2877 2598 1 587 514 162 188 38 chr2R 387241 387427 -20759281 + DNAREP1_DM LINE Penelope 89 302 -292 1 587 238 299 56 0 chr2R 388138 388245 -20758463 - NINJA_I LTR Pao -1451 4560 4448 1 587 703 313 50 22 chr2R 388514 388873 -20757835 - NINJA_I LTR Pao -2653 3358 2990 1 587 562 311 50 7 chr2R 390583 390884 -20755824 - NINJA_I LTR Pao -1460 4551 4238 1 587 232 300 29 39 chr2R 390886 390990 -20755718 - NINJA_I LTR Pao -2253 3758 3656 1 587 255 164 0 47 chr2R 391355 391419 -20755289 + A-rich Low_complexity Low_complexity 1 61 0 1 73 18308 38 46 4 chr2R 391419 393655 -20753053 + DOC3_DM LINE Jockey 1998 4327 -413 1 588 582 26 0 3 chr2R 393650 393731 -20752977 + DOC3_DM LINE Jockey 4642 4740 0 1 588 3033 148 127 3 chr2R 393785 394407 -20752301 + DM297_I LTR Gypsy 307 1005 -5162 1 588 3023 148 41 21 chr2R 394435 394994 -20751714 + DM297_I LTR Gypsy 2376 2945 -3222 1 588 1417 90 37 9 chr2R 394993 395207 -20751501 - PROTOP_B DNA P -70 1083 864 1 588 1066 167 153 7 chr2R 395211 395512 -20751196 - PROTOP DNA P -3447 1033 689 1 588 2241 68 4 0 chr2R 396120 396400 -20750308 - PROTOP_B DNA P 0 1153 873 1 588 2420 80 159 7 chr2R 396398 396975 -20749733 - PROTOP_B DNA P -325 828 163 1 588 1192 35 14 0 chr2R 396975 397120 -20749588 - TRANSIB1 DNA Transib 0 3014 2868 1 588 195 96 38 19 chr2R 397127 397180 -20749528 + (TTATA)n Simple_repeat Simple_repeat 2 55 0 1 588 11475 31 49 1 chr2R 397184 398606 -20748102 - TRANSIB1 DNA Transib -1339 1675 186 1 588 508 39 0 49 chr2R 398585 398666 -20748042 - TRANSIB1 DNA Transib -2937 77 1 1 588 900 82 133 0 chr2R 398666 398784 -20747924 - PROTOP_B DNA P -1017 136 1 1 588 10306 63 81 25 chr2R 399570 402207 -20744501 + TRANSIB2 DNA Transib 61 2843 -1 1 588 485 96 340 6 chr2R 402727 402890 -20743818 - DNAREP1_DM LINE Penelope -150 444 227 1 588 324 227 131 15 chr2R 405822 405837 -20740871 + P_DG DNA P 2731 2760 -128 1 588 1448 46 14 67 chr2R 405837 406047 -20740661 - DNAREP1_DM LINE Penelope 0 594 396 1 588 477 157 27 36 chr2R 406050 406162 -20740546 - DNAREP1_DM LINE Penelope -264 330 220 1 588 374 194 28 37 chr2R 408028 408135 -20738573 - Gypsy8_I LTR Gypsy -4241 106 1 1 588 872 164 0 22 chr2R 408209 408390 -20738318 - PROTOP_A DNA P -756 349 173 1 588 907 64 0 0 chr2R 409316 409425 -20737283 + PROTOP DNA P 4326 4434 -46 1 588 211 182 36 0 chr2R 409913 409968 -20736740 + (TTAAA)n Simple_repeat Simple_repeat 3 59 0 1 588 37 23 0 0 chr2R 409979 410023 -20736685 + AT_rich Low_complexity Low_complexity 1 44 0 1 588 1693 56 12 72 chr2R 410023 410272 -20736436 - DMCR1A LINE CR1 0 4470 4237 1 588 4124 54 27 2 chr2R 410252 410768 -20735940 - DMCR1A LINE CR1 -533 3937 3409 1 588 233 57 0 0 chr2R 410768 410803 -20735905 - DMCR1A LINE CR1 -1027 3443 3409 1 588 2866 38 3 0 chr2R 410797 411143 -20735565 - DMCR1A LINE CR1 -1021 3449 3103 1 588 6638 44 70 0 chr2R 411144 411981 -20734727 - DMCR1A LINE CR1 -1864 2606 1711 1 588 7480 45 58 2 chr2R 411978 413206 -20733502 - DMCR1A LINE CR1 -3109 1361 65 1 588 276 339 98 0 chr2R 413382 413494 -20733214 - OSVALDO_I LTR Gypsy -3592 3061 2939 1 588 936 164 53 30 chr2R 413516 413810 -20732898 + DNAREP1_DM LINE Penelope 87 334 -260 1 588 3547 53 63 7 chr2R 413821 414278 -20732430 - Baggins1 LINE LOA -2 5451 4969 1 588 4735 53 133 0 chr2R 414276 415169 -20731539 - Baggins1 LINE LOA -1360 4093 3082 1 588 25897 93 45 6 chr2R 415174 419326 -20727382 - DMRT1B LINE R1 -110 5073 744 1 588 1855 61 81 0 chr2R 419324 419495 -20727213 - DMRT1B LINE R1 -4850 333 163 1 588 180 0 0 0 chr2R 419495 419515 -20727193 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 588 1855 61 81 0 chr2R 419515 419589 -20727119 - DMRT1B LINE R1 -5021 162 69 1 588 2962 38 0 0 chr2R 419587 419928 -20726780 - Baggins1 LINE LOA -3473 1980 1640 1 588 6136 46 30 0 chr2R 419925 421261 -20725447 - Baggins1 LINE LOA -4048 1405 3 1 588 1301 130 234 7 chr2R 421268 421554 -20725154 + DNAREP1_DM LINE Penelope 243 593 -1 1 588 1398 292 116 40 chr2R 421571 422389 -20724319 + Gypsy3_I LTR Gypsy 1278 2157 -4020 1 588 469 300 74 43 chr2R 422376 422606 -20724102 + Gypsy2_I LTR Gypsy 1714 1950 -4185 1 588 664 253 185 8 chr2R 422621 422968 -20723740 + Gypsy3_I LTR Gypsy 2438 2876 -3545 1 588 879 282 114 27 chr2R 422971 423303 -20723405 + Gypsy6_I LTR Gypsy 4133 4493 -2519 1 588 2034 117 90 16 chr2R 423308 423673 -20723035 + DNAREP1_DM LINE Penelope 189 580 -14 1 588 735 297 124 41 chr2R 423775 424193 -20722515 - DIVER2_I LTR Pao -2168 1979 1527 1 588 1232 308 113 31 chr2R 424278 424931 -20721777 - DIVER2_I LTR Pao -2988 1159 453 1 588 24 32 0 0 chr2R 425222 425253 -20721455 + AT_rich Low_complexity Low_complexity 1 31 0 1 588 681 284 13 27 chr2R 425404 425628 -20721080 - BLASTOPIA_I LTR Gypsy 0 4481 4261 1 588 355 277 93 14 chr2R 425621 425760 -20720948 + BLASTOPIA_I LTR Gypsy 3414 3563 -918 1 588 1268 191 0 24 chr2R 426102 426349 -20720359 - Gypsy8_I LTR Gypsy -3421 926 686 1 588 1137 116 100 61 chr2R 426396 426625 -20720083 - Gypsy8_I LTR Gypsy -3767 580 343 1 588 684 233 0 0 chr2R 426682 426832 -20719876 - BS2 LINE Jockey -1909 2812 2663 1 588 7332 99 64 2 chr2R 426830 427887 -20718821 - BS2 LINE Jockey -2811 1910 788 1 588 2529 80 29 47 chr2R 427917 428297 -20718411 - STALKER4_LTR LTR Gypsy -29 373 1 1 588 1319 68 182 0 chr2R 428297 428489 -20718219 - BS2 LINE Jockey -3930 791 565 1 588 1952 21 33 0 chr2R 428493 428733 -20717975 + TRANSIB4 DNA Transib 961 1208 -1402 1 588 4576 39 11 2 chr2R 428735 429297 -20717411 + TRANSIB4 DNA Transib 2044 2610 0 1 588 4116 101 152 55 chr2R 429299 430104 -20716604 - DMRT1C LINE R1 -3450 1993 1111 1 588 3527 81 22 2 chr2R 430104 430601 -20716107 - DMRT1C LINE R1 -4475 968 462 1 588 262 159 40 80 chr2R 430701 430776 -20715932 - QUASIMODO_LTR LTR Gypsy -586 72 1 1 588 6032 5 0 0 chr2R 430784 431442 -20715266 + QUASIMODO_LTR LTR Gypsy 1 658 0 1 588 247 28 0 100 chr2R 431455 431495 -20715213 - DNAREP1_DM LINE Penelope -135 459 424 1 588 546 191 0 0 chr2R 431561 431671 -20715037 - Transib-N1_DM DNA Transib -1 513 404 1 588 787 312 38 17 chr2R 432021 432442 -20714266 + OSVALDO_I LTR Gypsy 1843 2272 -4381 1 588 23 33 0 0 chr2R 434048 434078 -20712630 + AT_rich Low_complexity Low_complexity 1 30 0 1 588 5954 50 26 5 chr2R 435338 436101 -20710607 - TRANSIB4 DNA Transib 0 2610 1832 1 588 6513 54 24 6 chr2R 436089 437164 -20709544 - TRANSIB4 DNA Transib -1404 1206 1 1 588 637 98 11 0 chr2R 437218 437310 -20709398 + HOBO DNA hAT 1 93 -2923 1 588 1010 180 41 0 chr2R 437350 437544 -20709164 + HOBO DNA hAT 195 396 -2620 1 588 1591 114 141 146 chr2R 437542 438023 -20708685 + HOBO DNA hAT 2358 2836 -180 1 588 3799 23 0 2 chr2R 438508 438937 -20707771 - ROO_LTR LTR Pao 0 428 1 1 588 22 56 0 0 chr2R 439612 439648 -20707060 + AT_rich Low_complexity Low_complexity 1 36 0 1 588 1105 98 79 6 chr2R 439648 439813 -20706895 - DNAREP1_DM LINE Penelope -148 446 270 1 588 674 147 105 11 chr2R 439798 440035 -20706673 + DNAREP1_DM LINE Penelope 135 331 -263 1 588 39205 17 17 4 chr2R 440100 444815 -20701893 + DOC2_DM LINE Jockey 1 4793 0 1 588 387 322 0 0 chr2R 445443 445586 -20701122 + DIVER2_I LTR Pao 1403 1545 -2602 1 588 337 285 64 32 chr2R 445730 445886 -20700822 + DIVER2_I LTR Pao 1790 1950 -2197 1 588 1175 257 85 31 chr2R 445971 446429 -20700279 + BS2 LINE Jockey 4233 4715 -6 1 588 954 165 254 36 chr2R 447152 447592 -20699116 - DNAREP1_DM LINE Penelope -2 592 57 1 588 838 129 35 30 chr2R 447589 447789 -20698919 - DM297_I LTR Gypsy -303 5864 5664 1 588 247 209 116 62 chr2R 448305 448417 -20698291 + DNAREP1_DM LINE Penelope 197 314 -280 1 588 1417 98 163 169 chr2R 449456 449934 -20696774 - DNAREP1_DM LINE Penelope 0 594 120 1 588 557 51 101 0 chr2R 449960 450039 -20696669 - PROTOP_A DNA P 0 1105 1019 1 588 1507 32 151 14 chr2R 450036 450254 -20696454 - PROTOP_A DNA P -857 248 1 1 588 34 24 0 0 chr2R 450744 450785 -20695923 + AT_rich Low_complexity Low_complexity 1 41 0 1 588 729 55 27 18 chr2R 450785 450896 -20695812 - DMCR1A LINE CR1 -392 4078 3967 1 588 224 29 86 0 chr2R 450896 450931 -20695777 + (AATAG)n Simple_repeat Simple_repeat 3 40 0 1 588 1091 132 57 13 chr2R 451150 451416 -20695292 + DNAREP1_DM LINE Penelope 70 315 -279 1 588 186 71 0 0 chr2R 451430 451458 -20695250 + (TATAA)n Simple_repeat Simple_repeat 2 29 0 1 588 1109 128 88 25 chr2R 451472 451712 -20694996 - DNAREP1_DM LINE Penelope -339 255 1 1 588 233 175 0 0 chr2R 451709 451766 -20694942 - DNAREP1_DM LINE Penelope -338 256 200 1 588 514 143 10 10 chr2R 451765 451864 -20694844 + DNAREP1_DM LINE Penelope 222 320 -274 1 588 46 54 0 0 chr2R 452786 452860 -20693848 + AT_rich Low_complexity Low_complexity 1 74 0 1 588 715 97 40 0 chr2R 452924 453048 -20693660 - DNAREP1_DM LINE Penelope -279 315 187 1 588 25 31 0 0 chr2R 453071 453103 -20693605 + AT_rich Low_complexity Low_complexity 1 32 0 1 588 3644 165 244 32 chr2R 453311 454378 -20692330 + FW_DM LINE Jockey 76 1368 -3324 1 588 5042 146 55 0 chr2R 454381 455315 -20691393 + FW_DM LINE Jockey 2239 3223 -1469 1 588 1908 121 0 0 chr2R 455326 455632 -20691076 + DMRT1B LINE R1 560 865 -4318 1 588 1904 46 103 0 chr2R 455632 455895 -20690813 - PROTOP DNA P -4190 290 1 1 588 742 226 0 0 chr2R 455895 456048 -20690660 + DMRT1B LINE R1 1494 1646 -3537 1 588 17982 42 53 1 chr2R 456066 458470 -20688238 + DMCR1A LINE CR1 1 2528 -1942 1 588 379 298 22 11 chr2R 458553 458733 -20687975 - FW3_DM LINE Jockey -669 2463 2282 1 588 292 157 0 0 chr2R 458808 458859 -20687849 - FW_DM LINE Jockey -1642 3050 3000 1 588 423 53 66 0 chr2R 459140 459216 -20687492 - PROTOP_B DNA P -408 745 665 1 588 482 171 205 0 chr2R 459224 459341 -20687367 - DNAREP1_DM LINE Penelope -134 460 320 1 588 13831 27 62 0 chr2R 459350 463275 -20683433 + DMRT1B LINE R1 919 5085 -98 1 588 27 0 0 0 chr2R 463285 463312 -20683396 + AT_rich Low_complexity Low_complexity 1 27 0 1 588 1402 131 41 7 chr2R 463312 463581 -20683127 - DNAREP1_DM LINE Penelope -273 321 44 1 588 235 277 56 56 chr2R 469125 469320 -20677388 + I_DM LINE I 3698 3892 -2339 1 588 249 57 0 0 chr2R 469385 469420 -20677288 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 1 588 21 36 0 0 chr2R 469436 469464 -20677244 + AT_rich Low_complexity Low_complexity 1 28 0 1 588 412 107 119 0 chr2R 469580 469664 -20677044 + DMCR1A LINE CR1 4179 4272 -198 1 588 667 50 139 0 chr2R 469969 470070 -20676638 + PROTOP DNA P 148 262 -4218 1 588 349 54 0 0 chr2R 470085 470141 -20676567 + PROTOP DNA P 651 707 -3773 1 588 1773 56 4 0 chr2R 470175 470406 -20676302 + PROTOP DNA P 4242 4479 -1 1 588 269 137 145 40 chr2R 470417 470493 -20676215 + NINJA_LTR LTR Pao 205 288 -29 1 588 1255 130 0 0 chr2R 470505 470697 -20676011 + NINJA_I LTR Pao 1217 1408 -4603 1 588 424 136 37 0 chr2R 470692 470773 -20675935 + NINJA_I LTR Pao 1556 1639 -4372 1 588 534 229 86 0 chr2R 470817 470957 -20675751 + NINJA_I LTR Pao 1787 1938 -4073 1 588 1900 121 212 2 chr2R 470967 471480 -20675228 + NINJA_I LTR Pao 3170 3790 -2221 1 588 2403 142 14 35 chr2R 471475 471907 -20674801 + NINJA_I LTR Pao 4332 4754 -1257 1 588 346 303 46 0 chr2R 472275 472427 -20674281 + DIVER2_I LTR Pao 1335 1493 -2654 1 588 321 231 0 0 chr2R 472880 472945 -20673763 + DIVER2_I LTR Pao 4081 4145 -2 1 588 1626 216 60 14 chr2R 473206 473638 -20673070 - Copia2_I LTR Copia -126 4036 3585 1 588 2039 238 89 2 chr2R 473639 474202 -20672506 - Copia2_I LTR Copia -896 3266 2655 1 588 810 119 6 45 chr2R 474235 474411 -20672297 + Gypsy8_I LTR Gypsy 68 236 -4111 1 588 6151 30 7 28 chr2R 474720 475545 -20671163 + G_DM LINE Jockey 3539 4346 0 1 588 1502 160 117 3 chr2R 475577 475946 -20670762 + DMCR1A LINE CR1 3944 4354 -116 1 588 374 294 214 7 chr2R 476010 476304 -20670404 + OSVALDO_I LTR Gypsy 2011 2365 -4288 1 588 1366 102 26 4 chr2R 476536 476763 -20669945 + DNAREP1_DM LINE Penelope 32 263 -331 1 588 522 214 54 16 chr2R 476758 476943 -20669765 + HOBO DNA hAT 2214 2405 -611 1 588 23 33 0 0 chr2R 476965 476995 -20669713 + AT_rich Low_complexity Low_complexity 1 30 0 1 588 206 32 0 31 chr2R 477058 477090 -20669618 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 588 451 188 33 33 chr2R 477389 477510 -20669198 + HOBO DNA hAT 2845 2965 -51 1 588 710 63 0 0 chr2R 477534 477629 -20669079 + DNAREP1_DM LINE Penelope 500 594 0 1 588 531 77 11 21 chr2R 477647 477740 -20668968 - TRANSIB3 DNA Transib -2791 92 1 1 588 7977 39 50 8 chr2R 477740 478809 -20667899 + DOC3_DM LINE Jockey 2578 3692 -1048 1 588 3870 39 51 0 chr2R 478805 479313 -20667395 + DOC3_DM LINE Jockey 4202 4735 -5 1 588 6713 32 52 6 chr2R 479465 480459 -20666249 - PROTOP_A DNA P 0 1105 49 1 588 720 51 0 0 chr2R 480458 480556 -20666152 - DOC3_DM LINE Jockey -29 4711 4614 1 588 2282 274 50 36 chr2R 480591 481569 -20665139 - Copia2_I LTR Copia -3055 1107 116 1 588 777 216 157 13 chr2R 481664 482045 -20664663 + PROTOP_A DNA P 693 1105 0 1 588 31 44 0 0 chr2R 482052 482097 -20664611 + AT_rich Low_complexity Low_complexity 1 45 0 1 588 21 57 0 0 chr2R 482160 482195 -20664513 + AT_rich Low_complexity Low_complexity 1 35 0 1 588 56 0 0 0 chr2R 482321 482377 -20664331 + AT_rich Low_complexity Low_complexity 1 56 0 1 588 248 154 0 30 chr2R 483060 483127 -20663581 + (TTAAA)n Simple_repeat Simple_repeat 5 69 0 1 588 268 188 24 24 chr2R 483804 483886 -20662822 + (TTATA)n Simple_repeat Simple_repeat 5 86 0 1 588 522 167 37 9 chr2R 484008 484116 -20662592 - PROTOP_B DNA P -656 497 387 1 588 1036 40 205 16 chr2R 484116 484368 -20662340 - DNAREP1_DM LINE Penelope -3 591 292 1 588 1887 116 94 16 chr2R 484578 485126 -20661582 - DNAREP1_DM LINE Penelope -123 471 1 1 588 465 127 271 19 chr2R 485118 485281 -20661427 - PROTOP_B DNA P -775 378 175 1 588 353 132 14 14 chr2R 485601 485670 -20661038 + DNAREP1_DM LINE Penelope 364 432 -162 1 588 241 122 0 0 chr2R 485670 485711 -20660997 - PROTOP_B DNA P 0 1153 1113 1 588 27 0 0 0 chr2R 485786 485813 -20660895 + AT_rich Low_complexity Low_complexity 1 27 0 1 588 185 83 28 0 chr2R 486147 486183 -20660525 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 588 1311 196 107 25 chr2R 486247 486645 -20660063 - PROTOP_B DNA P -679 474 45 1 588 24 32 0 0 chr2R 487766 487797 -20658911 + AT_rich Low_complexity Low_complexity 1 31 0 1 588 918 144 0 0 chr2R 487901 488181 -20658527 + (TA)n Simple_repeat Simple_repeat 1 280 0 1 588 801 168 0 0 chr2R 488197 488421 -20658287 + (TA)n Simple_repeat Simple_repeat 1 224 0 1 588 26 0 0 0 chr2R 489212 489238 -20657470 + AT_rich Low_complexity Low_complexity 1 26 0 1 588 322 278 15 8 chr2R 489262 489396 -20657312 - DMCR1A LINE CR1 -372 4098 3964 1 588 932 119 34 0 chr2R 489501 489678 -20657030 - DOC LINE Jockey -4 4721 4539 1 588 1423 91 92 35 chr2R 489695 489979 -20656729 - DNAREP1_DM LINE Penelope -294 300 1 1 588 951 259 50 17 chr2R 491166 491464 -20655244 - BEL_I LTR Pao -3527 1877 1570 1 588 239 200 67 0 chr2R 491865 491925 -20654783 - BEL_I LTR Pao -4373 1031 968 1 588 255 246 14 14 chr2R 493218 493292 -20653416 + DIVER2_I LTR Pao 613 686 -3461 1 588 24 53 0 0 chr2R 494826 494864 -20651844 + AT_rich Low_complexity Low_complexity 1 38 0 1 588 568 159 0 83 chr2R 494928 495072 -20651636 + DNAREP1_DM LINE Penelope 1 132 -462 1 588 318 127 49 37 chr2R 495109 495191 -20651517 + DNAREP1_DM LINE Penelope 209 291 -303 1 588 1167 138 106 1 chr2R 495233 495693 -20651015 + DNAREP1_DM LINE Penelope 168 594 0 1 588 33 85 0 0 chr2R 495769 495851 -20650857 + AT_rich Low_complexity Low_complexity 1 82 0 1 588 27 87 0 0 chr2R 496807 496876 -20649832 + AT_rich Low_complexity Low_complexity 1 69 0 1 588 22 70 0 0 chr2R 496958 497001 -20649707 + AT_rich Low_complexity Low_complexity 1 43 0 1 588 26 30 0 0 chr2R 497170 497203 -20649505 + AT_rich Low_complexity Low_complexity 1 33 0 1 588 2439 65 107 0 chr2R 497829 498212 -20648496 + PROTOP_B DNA P 1 424 -729 1 588 3901 50 19 0 chr2R 498222 498759 -20647949 + PROTOP_B DNA P 607 1153 0 1 588 430 70 0 0 chr2R 498760 498817 -20647891 + Gypsy12A_LTR LTR Gypsy 1934 1990 -290 1 588 520 277 50 27 chr2R 499148 499367 -20647341 - DIVER2_I LTR Pao -2148 1999 1776 1 588 241 333 10 50 chr2R 499518 499720 -20646988 - DIVER2_I LTR Pao -2712 1435 1242 1 588 269 352 40 6 chr2R 501803 501980 -20644728 + BLASTOPIA_I LTR Gypsy 4192 4374 -107 1 588 953 206 57 73 chr2R 502357 502672 -20644036 + DNAREP1_DM LINE Penelope 264 573 -21 1 588 1762 175 138 46 chr2R 503011 503641 -20643067 + PROTOP_B DNA P 138 839 -314 1 588 457 24 48 24 chr2R 503641 503725 -20642983 + (TATAA)n Simple_repeat Simple_repeat 2 87 0 1 588 1640 215 145 72 chr2R 503725 504040 -20642668 + PROTOP_B DNA P 840 1153 0 1 588 235 36 0 0 chr2R 504040 504068 -20642640 + PROTOP_B DNA P 1105 1132 -21 1 588 4006 56 19 0 chr2R 504295 504832 -20641876 - PROTOP_B DNA P 0 1153 607 1 588 275 60 40 0 chr2R 504842 504892 -20641816 - PROTOP_B DNA P -729 424 373 1 588 1504 29 333 0 chr2R 504905 505142 -20641566 - PROTOP_B DNA P -838 315 1 1 588 62 68 0 0 chr2R 505200 505318 -20641390 + AT_rich Low_complexity Low_complexity 1 118 0 1 588 1207 154 154 17 chr2R 506035 506391 -20640317 - DNAREP1_DM LINE Penelope -262 332 2 1 588 23 0 0 0 chr2R 508655 508678 -20638030 + AT_rich Low_complexity Low_complexity 1 23 0 1 588 1664 122 107 59 chr2R 509950 510306 -20636402 - STALKER4_LTR LTR Gypsy -29 373 1 1 588 9307 22 6 0 chr2R 510514 511613 -20635095 - PROTOP_A DNA P 0 1105 1 1 588 626 99 430 30 chr2R 515945 516105 -20630603 + QUASIMODO_LTR LTR Gypsy 1 224 -434 1 588 5222 24 47 3 chr2R 516106 516791 -20629917 + QUASIMODO_I LTR Gypsy 4394 5108 -952 1 588 4559 45 28 29 chr2R 516788 517504 -20629204 + QUASIMODO_I LTR Gypsy 5346 6060 0 1 588 272 26 0 116 chr2R 517504 517547 -20629161 + QUASIMODO_LTR LTR Gypsy 1 38 -620 1 588 204 40 0 0 chr2R 517547 517572 -20629136 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 588 2080 39 12 0 chr2R 517600 517854 -20628854 + DMRT1A LINE R1 1910 2166 -3017 1 588 5141 32 82 1 chr2R 517845 518845 -20627863 + DMRT1A LINE R1 2649 3729 -1454 1 588 8579 36 11 2 chr2R 518844 519881 -20626827 + DMRT1A LINE R1 3844 4889 -294 1 588 695 35 24 0 chr2R 519891 519976 -20626732 + DMRT1A LINE R1 5055 5141 -42 1 588 2851 35 3 0 chr2R 519972 520312 -20626396 + QUASIMODO_LTR LTR Gypsy 318 658 0 1 588 21 0 0 0 chr2R 520319 520340 -20626368 + AT_rich Low_complexity Low_complexity 1 21 0 1 588 877 115 313 3 chr2R 520361 520692 -20626016 - DNAREP1_DM LINE Penelope -53 541 123 1 588 1876 98 58 109 chr2R 520844 521220 -20625488 - DNAREP1_DM LINE Penelope -217 377 21 1 588 245 241 0 0 chr2R 521599 521657 -20625051 - ACCORD_I LTR Gypsy -4120 2168 2111 1 588 1153 169 430 0 chr2R 522762 523134 -20623574 - DMRT1B LINE R1 -444 4739 4208 1 588 1059 175 323 6 chr2R 523119 523471 -20623237 - DMRT1B LINE R1 -1262 3921 3458 1 73 7595 54 51 7 chr2R 523469 524465 -20622243 + DMCR1A LINE CR1 233 1272 -3198 1 589 7613 55 28 16 chr2R 524468 525476 -20621232 + DMCR1A LINE CR1 2495 3514 -956 1 589 1501 16 10 80 chr2R 525477 525678 -20621030 + DMCR1A LINE CR1 4284 4470 0 1 589 39 22 0 0 chr2R 525678 525724 -20620984 + AT_rich Low_complexity Low_complexity 1 46 0 1 589 202 182 36 0 chr2R 525735 525790 -20620918 + (TTTAA)n Simple_repeat Simple_repeat 3 59 0 1 589 6862 50 124 36 chr2R 526372 527432 -20619276 - PROTOP_B DNA P 0 1153 1 1 589 349 104 885 0 chr2R 527659 527755 -20618953 - DNAREP1_DM LINE Penelope -413 181 1 1 589 2489 89 122 158 chr2R 527789 528402 -20618306 - DNAREP1_DM LINE Penelope 0 594 4 1 589 740 326 80 8 chr2R 528490 528864 -20617844 + NINJA_I LTR Pao 4846 5246 -765 1 589 592 328 51 17 chr2R 528874 529169 -20617539 + NINJA_I LTR Pao 5429 5733 -278 1 589 1015 71 174 3 chr2R 529212 529499 -20617209 + DM297_I LTR Gypsy 3421 3756 -2411 1 589 252 125 0 0 chr2R 529497 529537 -20617171 - BARI1 DNA Tc1 -1708 42 3 1 589 4821 7 37 0 chr2R 529505 530078 -20616630 + IDEFIX_LTR LTR Gypsy 1 594 0 1 589 25 0 0 0 chr2R 530267 530292 -20616416 + AT_rich Low_complexity Low_complexity 1 25 0 1 589 47980 10 3 1 chr2R 530712 536328 -20610380 + IDEFIX_I LTR Gypsy 1 5628 0 1 589 4526 7 76 0 chr2R 536328 536880 -20609828 + IDEFIX_LTR LTR Gypsy 1 594 0 1 589 2632 95 137 8 chr2R 536887 537544 -20609164 + DM297_I LTR Gypsy 3795 4535 -1632 1 589 30 0 0 0 chr2R 537822 537852 -20608856 + AT_rich Low_complexity Low_complexity 1 30 0 1 589 8236 32 36 1 chr2R 537898 538935 -20607773 + PROTOP DNA P 3408 4480 0 1 589 4298 40 19 0 chr2R 539087 539611 -20607097 - DOC3_DM LINE Jockey -5 4735 4202 1 589 8424 36 50 8 chr2R 539607 540676 -20606032 - DOC3_DM LINE Jockey -1048 3692 2578 1 589 507 80 11 43 chr2R 540679 540771 -20605937 + TRANSIB3 DNA Transib 4 92 -2791 1 589 743 63 0 0 chr2R 540789 540884 -20605824 - DNAREP1_DM LINE Penelope 0 594 500 1 589 496 181 218 20 chr2R 540886 541033 -20605675 - HOBO DNA hAT 0 3016 2841 1 589 61 80 0 0 chr2R 541316 541454 -20605254 + AT_rich Low_complexity Low_complexity 1 138 0 1 589 549 220 54 16 chr2R 541476 541661 -20605047 - HOBO DNA hAT -611 2405 2214 1 589 1435 95 27 5 chr2R 541663 541885 -20604823 - DNAREP1_DM LINE Penelope -336 258 32 1 589 388 314 122 9 chr2R 542189 542411 -20604297 - OSVALDO_I LTR Gypsy -4396 2257 2011 1 589 1754 165 79 0 chr2R 542475 542856 -20603852 - DMCR1A LINE CR1 -116 4354 3944 1 589 1026 101 0 45 chr2R 543183 543360 -20603348 - Gypsy8_I LTR Gypsy -4111 236 68 1 589 319 218 13 0 chr2R 543455 543533 -20603175 - Gypsy8_I LTR Gypsy -4268 79 1 1 589 1149 161 60 107 chr2R 543533 543852 -20602856 - Gypsy8_LTR LTR Gypsy 0 304 1 1 589 1176 148 211 0 chr2R 543859 544115 -20602593 + DNAREP1_DM LINE Penelope 272 581 -13 1 589 230 95 0 23 chr2R 545277 545320 -20601388 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1 589 287 304 9 9 chr2R 545939 546055 -20600653 + Ulysses_I LTR Gypsy 2166 2281 -4100 1 589 24 0 0 0 chr2R 546604 546628 -20600080 + AT_rich Low_complexity Low_complexity 1 24 0 1 589 1398 71 0 0 chr2R 546631 546842 -20599866 - S_DM DNA Tc1 0 1736 1526 1 589 23340 38 56 13 chr2R 546906 550623 -20596085 - ROOA_I LTR Pao -3058 3791 1 1 589 1499 17 0 0 chr2R 550623 550795 -20595913 - ROOA_LTR LTR Pao 0 386 215 1 589 259 245 40 60 chr2R 551456 551556 -20595152 + I_DM LINE I 4578 4675 -1556 1 589 391 156 0 0 chr2R 551807 551871 -20594837 - Invader3_LTR LTR Gypsy -141 157 94 1 589 478 62 148 12 chr2R 551874 551955 -20594753 - DNAREP1_DM LINE Penelope -502 92 1 1 589 480 233 127 40 chr2R 551957 552185 -20594523 - DNAREP1_DM LINE Penelope -346 248 1 1 589 2576 45 0 16 chr2R 553593 553913 -20592795 - G4_DM LINE Jockey -632 3224 2910 1 589 418 149 286 43 chr2R 553910 554050 -20592658 - Gypsy12_I LTR Gypsy -5372 174 1 1 589 376 94 0 0 chr2R 554050 554103 -20592605 - Gypsy12A_LTR LTR Gypsy -7 2273 2221 1 589 1061 91 6 11 chr2R 554103 554280 -20592428 - FB4_DM DNA Tc1 -1329 2760 2585 1 589 7066 116 91 25 chr2R 554281 555542 -20591166 - FB4_DM DNA Tc1 -1639 2450 1107 1 589 590 115 0 40 chr2R 555537 555637 -20591071 + DNAREP1_DM LINE Penelope 499 594 0 1 589 349 197 0 0 chr2R 555661 555732 -20590976 - DNAREP1_DM LINE Penelope -346 248 178 1 589 1036 160 19 14 chr2R 555727 555942 -20590766 - DNAREP1_DM LINE Penelope -378 216 1 1 589 7811 92 24 2 chr2R 556184 557827 -20588881 + S_DM DNA Tc1 59 1736 0 1 589 1629 142 124 21 chr2R 558202 558541 -20588167 + DNAREP1_DM LINE Penelope 219 592 -2 1 589 21 57 0 0 chr2R 560579 560614 -20586094 + AT_rich Low_complexity Low_complexity 1 35 0 1 589 770 215 96 9 chr2R 561193 561423 -20585285 + DNAREP1_DM LINE Penelope 48 297 -297 1 589 858 320 34 6 chr2R 563145 563466 -20583242 + DIVER2_I LTR Pao 3274 3603 -544 1 589 306 220 0 0 chr2R 563647 563706 -20583002 + DIVER2_I LTR Pao 3871 3929 -218 1 589 196 53 26 26 chr2R 563779 563818 -20582890 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 589 1022 92 6 26 chr2R 564254 564410 -20582298 + PROTOP DNA P 131 283 -4197 1 589 1056 55 176 0 chr2R 564409 564654 -20582054 + PROTOP DNA P 418 707 -3773 1 589 452 101 0 0 chr2R 564651 564720 -20581988 + PROTOP DNA P 1013 1081 -3399 1 589 817 126 35 0 chr2R 564713 564856 -20581852 + PROTOP DNA P 3918 4065 -415 1 589 2116 169 50 10 chr2R 565153 565570 -20581138 + DMRT1A LINE R1 38 471 -4712 1 589 2808 86 131 0 chr2R 565565 565984 -20580724 - DMRT1A LINE R1 -1757 3426 2953 1 589 411 202 0 0 chr2R 565980 566064 -20580644 + DMRT1A LINE R1 4391 4474 -709 1 589 269 242 15 15 chr2R 566059 566126 -20580582 - DOC LINE Jockey -1136 3604 3538 1 589 416 236 32 9 chr2R 566195 566319 -20580389 - DOC LINE Jockey -1406 3334 3201 1 589 47 0 0 0 chr2R 567445 567492 -20579216 + AT_rich Low_complexity Low_complexity 1 47 0 1 589 22 56 0 0 chr2R 568127 568163 -20578545 + AT_rich Low_complexity Low_complexity 1 36 0 1 589 433 328 39 46 chr2R 568506 568908 -20577800 + Gypsy6_I LTR Gypsy 1437 1781 -5231 1 589 929 344 60 45 chr2R 570177 570621 -20576087 + GTWIN_I LTR Gypsy 2320 2818 -3603 1 589 1199 56 107 0 chr2R 570621 570818 -20575890 + TLD2 Unknown Unknown 1 218 0 1 589 929 344 60 45 chr2R 570818 571456 -20575252 + GTWIN_I LTR Gypsy 2819 3538 -2883 1 589 262 286 49 49 chr2R 571975 572137 -20574571 + GTWIN_I LTR Gypsy 4123 4284 -2137 1 589 245 175 73 73 chr2R 572315 572383 -20574325 + Gypsy4_I LTR Gypsy 4324 4391 -1897 1 589 28 0 0 0 chr2R 572684 572712 -20573996 + AT_rich Low_complexity Low_complexity 1 28 0 1 589 47 0 0 0 chr2R 574593 574640 -20572068 + AT_rich Low_complexity Low_complexity 1 47 0 1 589 973 42 488 0 chr2R 574995 575155 -20571553 - Gypsy12A_LTR LTR Gypsy 0 2280 2043 1 589 341 114 114 0 chr2R 575173 575243 -20571465 - DNAREP1_DM LINE Penelope -25 569 492 1 589 614 201 71 22 chr2R 575418 575601 -20571107 - Gypsy12A_LTR LTR Gypsy -32 2248 2057 1 589 6759 67 81 0 chr2R 575972 576912 -20569796 - DMCR1A LINE CR1 -315 4155 3140 1 589 1356 203 30 0 chr2R 576908 577174 -20569534 + DMRT1B LINE R1 1835 2108 -3075 1 589 1482 174 318 1 chr2R 577171 577794 -20568914 + DMRT1B LINE R1 2383 3202 -1981 1 589 243 95 0 23 chr2R 577818 577861 -20568847 + DMRT1B LINE R1 4803 4844 -339 1 589 275 296 0 0 chr2R 578320 578391 -20568317 - DIVER2_I LTR Pao -901 3246 3176 1 589 256 211 0 66 chr2R 578469 578530 -20568178 - DIVER2_I LTR Pao -1188 2959 2903 1 589 231 86 33 49 chr2R 578604 578665 -20568043 + (TTA)n Simple_repeat Simple_repeat 3 62 0 1 589 29 28 0 0 chr2R 578814 578850 -20567858 + AT_rich Low_complexity Low_complexity 1 36 0 1 589 24 53 0 0 chr2R 578910 578948 -20567760 + AT_rich Low_complexity Low_complexity 1 38 0 1 589 2360 99 121 8 chr2R 581152 581540 -20565168 + DNAREP1_DM LINE Penelope 163 594 0 1 589 225 0 0 0 chr2R 581713 581738 -20564970 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 589 470 252 0 0 chr2R 582312 582423 -20564285 + DNAREP1_DM LINE Penelope 349 459 -135 1 589 374 141 118 0 chr2R 582435 582520 -20564188 + DNAREP1_DM LINE Penelope 500 594 0 1 589 21 0 0 0 chr2R 582590 582611 -20564097 + AT_rich Low_complexity Low_complexity 1 21 0 1 589 23 22 0 61 chr2R 582912 582961 -20563747 + AT_rich Low_complexity Low_complexity 1 46 0 1 589 23 0 0 0 chr2R 583140 583163 -20563545 + AT_rich Low_complexity Low_complexity 1 23 0 1 589 23 33 0 0 chr2R 583430 583460 -20563248 + AT_rich Low_complexity Low_complexity 1 30 0 1 589 2948 143 39 28 chr2R 583467 584035 -20562673 + DNAREP1_DM LINE Penelope 1 574 -20 1 589 8695 24 41 1 chr2R 584035 585097 -20561611 + PROTOP_A DNA P 1 1105 0 1 589 312 226 122 21 chr2R 585148 585292 -20561416 + DNAREP1_DM LINE Penelope 141 327 -267 1 589 29 28 0 0 chr2R 585358 585394 -20561314 + AT_rich Low_complexity Low_complexity 1 36 0 1 589 27 0 0 0 chr2R 585952 585979 -20560729 + AT_rich Low_complexity Low_complexity 1 27 0 1 589 21 0 0 0 chr2R 586910 586931 -20559777 + AT_rich Low_complexity Low_complexity 1 21 0 1 589 1635 106 141 35 chr2R 586931 587540 -20559168 + DNAREP1_DM LINE Penelope 34 583 -11 1 589 796 199 180 22 chr2R 587570 587842 -20558866 + DNAREP1_DM LINE Penelope 218 532 -62 1 589 27 29 0 0 chr2R 587848 587882 -20558826 + AT_rich Low_complexity Low_complexity 1 34 0 1 589 22 35 0 0 chr2R 588089 588118 -20558590 + AT_rich Low_complexity Low_complexity 1 29 0 1 589 180 0 0 0 chr2R 588119 588139 -20558569 + (T)n Simple_repeat Simple_repeat 1 20 0 1 589 24 32 0 0 chr2R 588767 588798 -20557910 + AT_rich Low_complexity Low_complexity 1 31 0 1 589 1315 142 29 36 chr2R 588817 589095 -20557613 + DNAREP1_DM LINE Penelope 2 277 -317 1 589 309 160 0 0 chr2R 589096 589146 -20557562 + DNAREP1_DM LINE Penelope 179 228 -366 1 589 1119 128 146 8 chr2R 589161 589371 -20557337 + DNAREP1_DM LINE Penelope 284 492 -102 1 589 207 88 0 0 chr2R 590483 590517 -20556191 + (T)n Simple_repeat Simple_repeat 1 34 0 1 589 501 122 12 0 chr2R 590787 590869 -20555839 + DNAREP1_DM LINE Penelope 512 594 0 1 589 350 193 0 83 chr2R 591003 591099 -20555609 + DNAREP1_DM LINE Penelope 91 178 -416 1 589 594 74 231 0 chr2R 591104 591212 -20555496 + DNAREP1_DM LINE Penelope 356 488 -106 1 589 278 196 294 0 chr2R 591219 591311 -20555397 - DNAREP1_DM LINE Penelope -27 567 449 1 589 724 114 516 4 chr2R 592888 593150 -20553558 + DNAREP1_DM LINE Penelope 1 396 -198 1 589 1645 166 98 2 chr2R 593175 593589 -20553119 + DNAREP1_DM LINE Penelope 13 582 -12 1 589 244 271 40 30 chr2R 593755 593854 -20552854 - DOC2_DM LINE Jockey -1007 3786 3687 1 589 1225 307 39 9 chr2R 593835 594421 -20552287 - FW2_DM LINE Jockey -831 3130 2308 1 589 434 15 86 71 chr2R 594588 594614 -20552094 - DNAREP1_DM LINE Penelope 0 594 564 1 589 198 0 0 0 chr2R 594614 594636 -20552072 + (TAGGG)n Simple_repeat Simple_repeat 1 22 0 1 589 1786 73 319 18 chr2R 594636 594990 -20551718 - DNAREP1_DM LINE Penelope -31 563 115 1 589 899 107 181 185 chr2R 595198 595474 -20551234 + HOBO DNA hAT 3 277 -2739 1 589 1627 98 216 17 chr2R 595496 595844 -20550864 + PROTOP_B DNA P 34 450 -703 1 589 1416 143 112 0 chr2R 595843 596094 -20550614 + HOBO DNA hAT 2630 2908 -108 1 589 961 101 0 48 chr2R 596169 596336 -20550372 - Gypsy8_I LTR Gypsy -4121 226 68 1 589 379 156 26 0 chr2R 596410 596487 -20550221 - Gypsy8_I LTR Gypsy -4268 79 1 1 589 600 163 0 11 chr2R 596475 596610 -20550098 - Gypsy8_LTR LTR Gypsy 0 304 94 1 589 1493 68 5 0 chr2R 596607 596798 -20549910 - PROTOP_B DNA P -946 207 16 1 589 25 0 0 0 chr2R 596881 596906 -20549802 + AT_rich Low_complexity Low_complexity 1 25 0 1 589 415 21 0 0 chr2R 597120 597168 -20549540 + DNAREP1_DM LINE Penelope 443 490 -104 1 589 1171 43 0 0 chr2R 597160 597298 -20549410 - ACCORD2_I LTR Gypsy -5713 1499 1362 1 589 1194 87 11 7 chr2R 597476 597680 -20549028 + TC1-2_DM DNA Tc1 96 398 -1246 1 589 3892 49 76 13 chr2R 597677 598218 -20548490 - TC1-2_DM DNA Tc1 -236 1408 834 1 589 1274 84 0 0 chr2R 598215 598381 -20548327 + TC1-2_DM DNA Tc1 632 797 -847 1 589 1547 124 49 20 chr2R 598386 598742 -20547966 + DNAREP1_DM LINE Penelope 190 594 0 1 589 25 51 0 0 chr2R 600283 600322 -20546386 + AT_rich Low_complexity Low_complexity 1 39 0 1 589 879 109 276 0 chr2R 600338 600537 -20546171 - DMCR1A LINE CR1 -48 4422 4169 1 589 6493 64 101 6 chr2R 600544 601584 -20545124 + TRANSIB2 DNA Transib 3 1141 -1703 1 589 1532 51 0 0 chr2R 601585 601780 -20544928 + TRANSIB2 DNA Transib 1848 2042 -802 1 589 389 79 48 0 chr2R 601781 601844 -20544864 - TRANSIB2 DNA Transib -222 2622 2557 1 589 213 39 0 0 chr2R 601851 601877 -20544831 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1 589 1109 88 99 0 chr2R 601897 602079 -20544629 + TRANSIB2 DNA Transib 2645 2844 0 1 589 1910 162 45 6 chr2R 602085 602438 -20544270 - DMCR1A LINE CR1 -310 4160 3794 1 589 665 154 0 0 chr2R 602438 602542 -20544166 - DNAREP1_DM LINE Penelope -171 423 320 1 589 855 198 73 6 chr2R 602544 602722 -20543986 - Invader6_I LTR Gypsy -945 3154 2965 1 589 765 124 72 46 chr2R 602723 602875 -20543833 + PROTOP_B DNA P 7 162 -991 1 589 1033 263 70 15 chr2R 603388 603731 -20542977 - Invader6_I LTR Gypsy -2069 2030 1669 1 589 593 174 0 47 chr2R 604288 604410 -20542298 + PROTOP_B DNA P 269 384 -769 1 589 454 35 18 0 chr2R 604410 604467 -20542241 + DNAREP1_DM LINE Penelope 2 59 -535 1 589 10458 32 50 0 chr2R 604469 606056 -20540652 + TC1_DM DNA Tc1 1 1666 0 1 589 1576 114 272 40 chr2R 606056 606485 -20540223 + DNAREP1_DM LINE Penelope 63 594 0 1 589 24 67 0 0 chr2R 606508 606553 -20540155 + AT_rich Low_complexity Low_complexity 1 45 0 1 589 1058 182 4 47 chr2R 606594 606830 -20539878 + PROTOP_B DNA P 928 1153 0 1 589 596 129 20 0 chr2R 606935 607036 -20539672 + DNAREP1_DM LINE Penelope 492 594 0 1 589 251 274 0 0 chr2R 607104 607166 -20539542 + DNAREP1_DM LINE Penelope 9 70 -524 1 589 180 97 0 0 chr2R 607733 607764 -20538944 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1 589 363 59 0 56 chr2R 607859 607913 -20538795 + DNAREP1_DM LINE Penelope 36 86 -508 1 589 433 196 41 0 chr2R 607910 608007 -20538701 + DNAREP1_DM LINE Penelope 494 594 0 1 589 274 337 0 0 chr2R 608068 608157 -20538551 + DIVER2_I LTR Pao 907 995 -3152 1 589 1059 132 62 10 chr2R 609081 609273 -20537435 - DNAREP1_DM LINE Penelope -392 202 1 1 589 24 67 0 0 chr2R 609293 609338 -20537370 + AT_rich Low_complexity Low_complexity 1 45 0 1 589 339 44 0 0 chr2R 609915 609960 -20536748 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 589 234 81 0 0 chr2R 609964 610001 -20536707 + (TAA)n Simple_repeat Simple_repeat 1 37 0 1 589 456 174 70 55 chr2R 610225 610353 -20536355 + BURDOCK_I LTR Gypsy 1 130 -5730 1 589 847 142 108 25 chr2R 610369 610585 -20536123 + DNAREP1_DM LINE Penelope 1 344 -250 1 589 203 114 23 0 chr2R 610860 610904 -20535804 + (TAAAAA)n Simple_repeat Simple_repeat 2 46 0 1 589 382 75 0 0 chr2R 611310 611363 -20535345 + DNAREP1_DM LINE Penelope 537 589 -5 1 589 925 130 183 5 chr2R 611366 611552 -20535156 + BURDOCK_I LTR Gypsy 2483 2701 -3159 1 589 509 90 0 0 chr2R 611579 611646 -20535062 + BURDOCK_I LTR Gypsy 3328 3394 -2466 1 589 6945 147 91 19 chr2R 611717 611827 -20534881 + BURDOCK_I LTR Gypsy 3757 3868 -1992 1 589 214 29 0 54 chr2R 611827 611864 -20534844 + (CTTTA)n Simple_repeat Simple_repeat 4 38 0 1 589 6945 147 91 19 chr2R 611864 613274 -20533434 + BURDOCK_I LTR Gypsy 3869 5386 -474 1 589 524 222 176 16 chr2R 613281 613469 -20533239 + BURDOCK_I LTR Gypsy 5642 5859 -1 1 589 708 149 19 0 chr2R 613570 613724 -20532984 - DNAREP1_DM LINE Penelope -336 258 102 1 589 1391 134 42 0 chr2R 613788 614027 -20532681 + DNAREP1_DM LINE Penelope 343 591 -3 1 589 21 0 0 0 chr2R 614817 614838 -20531870 + AT_rich Low_complexity Low_complexity 1 21 0 1 589 22 56 0 0 chr2R 619670 619706 -20527002 + AT_rich Low_complexity Low_complexity 1 36 0 1 589 509 228 32 0 chr2R 619975 620133 -20526575 + DNAREP1_DM LINE Penelope 194 356 -238 1 589 293 234 170 73 chr2R 620130 620419 -20526289 - QUASIMODO_I LTR Gypsy -1246 4814 4666 1 589 25439 8 16 0 chr2R 620417 623439 -20523269 + DOC2_DM LINE Jockey 1725 4793 0 1 589 231 204 0 0 chr2R 623456 623510 -20523198 - TV1I LTR Gypsy -1585 4378 4325 1 589 1581 38 163 0 chr2R 623518 623782 -20522926 + ROOA_LTR LTR Pao 80 386 0 1 589 56 0 0 0 chr2R 624642 624698 -20522010 + AT_rich Low_complexity Low_complexity 1 56 0 1 589 8336 18 1 1 chr2R 624762 625754 -20520954 + MAX_I LTR Pao 6271 7262 -652 1 589 1477 73 0 0 chr2R 625753 625957 -20520751 - MAX_LTR LTR Pao -117 204 1 1 589 888 127 307 44 chr2R 627127 627396 -20519312 + DMCR1A LINE CR1 3123 3462 -1008 1 589 5079 50 105 1 chr2R 627405 628139 -20518569 - DMCR1A LINE CR1 0 4470 3661 1 589 8968 52 12 2 chr2R 628153 629340 -20517368 - DMCR1A LINE CR1 -1391 3079 1882 1 589 3811 36 63 8 chr2R 629363 629868 -20516840 - DMCR1A LINE CR1 -2777 1693 1161 1 589 4770 50 78 4 chr2R 629869 630787 -20515921 - DMCR1A LINE CR1 -3484 986 1 1 589 23 33 0 0 chr2R 630844 630874 -20515834 + AT_rich Low_complexity Low_complexity 1 30 0 1 589 241 170 0 0 chr2R 631256 631303 -20515405 - DNAREP1_DM LINE Penelope -154 440 394 1 589 35 0 0 0 chr2R 631349 631384 -20515324 + AT_rich Low_complexity Low_complexity 1 35 0 1 589 33 0 0 0 chr2R 631669 631702 -20515006 + AT_rich Low_complexity Low_complexity 1 33 0 1 589 22 0 0 0 chr2R 632224 632246 -20514462 + AT_rich Low_complexity Low_complexity 1 22 0 1 589 239 273 29 36 chr2R 632358 632495 -20514213 - PROTOP DNA P -135 4345 4210 1 589 215 178 22 0 chr2R 633304 633349 -20513359 + A-rich Low_complexity Low_complexity 1 46 0 1 589 570 252 15 76 chr2R 635012 635274 -20511434 + DNAREP1_DM LINE Penelope 1 246 -348 1 589 388 132 92 0 chr2R 636005 636081 -20510627 - DNAREP1_DM LINE Penelope -150 444 362 1 589 229 308 0 0 chr2R 636550 636628 -20510080 - DNAREP1_DM LINE Penelope -516 78 1 1 589 32 26 0 0 chr2R 636628 636667 -20510041 + AT_rich Low_complexity Low_complexity 1 39 0 1 589 28 0 0 0 chr2R 637029 637057 -20509651 + AT_rich Low_complexity Low_complexity 1 28 0 1 589 543 144 0 9 chr2R 637330 637435 -20509273 - Gypsy8_LTR LTR Gypsy -134 170 67 1 589 379 218 74 40 chr2R 637404 637552 -20509156 - Gypsy8_LTR LTR Gypsy -150 154 2 1 589 23 33 0 0 chr2R 637557 637587 -20509121 + AT_rich Low_complexity Low_complexity 1 30 0 1 589 22 56 0 0 chr2R 637833 637869 -20508839 + AT_rich Low_complexity Low_complexity 1 36 0 1 589 8700 26 10 3 chr2R 637903 639000 -20507708 + PROTOP_A DNA P 1 1105 0 1 589 571 146 169 0 chr2R 639087 639217 -20507491 - DNAREP1_DM LINE Penelope -283 311 160 1 589 1253 105 112 109 chr2R 639416 639738 -20506970 + DNAREP1_DM LINE Penelope 1 323 -271 1 589 954 184 100 11 chr2R 639910 640316 -20506392 + DMRT1C LINE R1 520 997 -4446 1 589 945 246 157 39 chr2R 640357 640789 -20505919 + DMRT1C LINE R1 1299 1781 -3662 1 589 555 219 73 73 chr2R 640794 640986 -20505722 + DMRT1C LINE R1 1977 2168 -3275 1 589 31 58 0 0 chr2R 641579 641631 -20505077 + AT_rich Low_complexity Low_complexity 1 52 0 1 589 21 0 0 0 chr2R 641976 641997 -20504711 + AT_rich Low_complexity Low_complexity 1 21 0 1 589 2464 134 47 14 chr2R 642437 642858 -20503850 + DMCR1A LINE CR1 772 1206 -3264 1 589 2235 99 179 11 chr2R 642858 643328 -20503380 + DNAREP1_DM LINE Penelope 1 550 -44 1 589 22 56 0 0 chr2R 644671 644707 -20502001 + AT_rich Low_complexity Low_complexity 1 36 0 1 589 28 29 0 0 chr2R 645010 645045 -20501663 + AT_rich Low_complexity Low_complexity 1 35 0 1 589 241 26 26 26 chr2R 645736 645775 -20500933 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 589 1897 41 7 4 chr2R 645775 646044 -20500664 - FB4_DM DNA Tc1 -1335 2754 2485 1 589 7297 69 4 4 chr2R 646039 647045 -20499663 - FB4_DM DNA Tc1 -1759 2330 1325 1 589 971 91 78 0 chr2R 647041 647290 -20499418 + Gypsy2_I LTR Gypsy 3485 3839 -2296 1 589 3824 134 42 1 chr2R 647287 647952 -20498756 + Gypsy2_I LTR Gypsy 4097 5317 -1695 1 589 2359 108 21 8 chr2R 647959 648334 -20498374 + Gypsy2_I LTR Gypsy 5115 5494 -641 1 589 508 79 0 13 chr2R 648336 648413 -20498295 + Gypsy2_I LTR Gypsy 5692 5767 -368 1 589 828 149 7 7 chr2R 648457 648606 -20498102 + Gypsy2_LTR LTR Gypsy 58 206 -147 1 589 1284 171 50 75 chr2R 648844 649260 -20497448 + Gypsy12A_LTR LTR Gypsy 1009 1414 -866 1 589 213 65 0 0 chr2R 649275 649306 -20497402 + (TTATA)n Simple_repeat Simple_repeat 3 33 0 1 589 447 128 18 89 chr2R 649306 649418 -20497290 + Gypsy12A_LTR LTR Gypsy 1510 1613 -667 1 589 26 30 0 0 chr2R 649418 649451 -20497257 + AT_rich Low_complexity Low_complexity 1 33 0 1 589 327 24 0 0 chr2R 649463 649504 -20497204 + Invader2_LTR LTR Gypsy 1 41 -225 1 589 4987 0 0 0 chr2R 649504 650090 -20496618 - POGO DNA Pogo 0 2121 1536 1 589 7881 1 0 1 chr2R 650088 650995 -20495713 - POGO DNA Pogo -1215 906 1 1 589 1908 22 0 0 chr2R 650995 651222 -20495486 + Invader2_LTR LTR Gypsy 40 266 0 1 589 484 0 0 0 chr2R 651222 651283 -20495425 + Invader2_I LTR Gypsy 1 61 -4531 1 589 662 164 0 0 chr2R 651481 651597 -20495111 + DMRT1A LINE R1 3762 3877 -1306 1 589 764 206 318 26 chr2R 651619 652096 -20494612 + DMRT1A LINE R1 3954 4569 -614 1 589 274 198 53 32 chr2R 652108 652202 -20494506 + DMCR1A LINE CR1 376 471 -3999 1 589 410 264 171 0 chr2R 652238 652378 -20494330 + DOC3_DM LINE Jockey 1364 1527 -3213 1 589 1527 87 17 0 chr2R 652626 652857 -20493851 + Invader2_LTR LTR Gypsy 32 266 0 1 73 25427 11 19 9 chr2R 652858 656031 -20490677 + Invader2_I LTR Gypsy 2 3206 -1386 1 590 4672 21 0 8 chr2R 656020 656643 -20490065 + Invader2_I LTR Gypsy 3975 4592 0 1 590 2232 23 0 0 chr2R 656643 656909 -20489799 + Invader2_LTR LTR Gypsy 1 266 0 1 590 368 156 41 20 chr2R 656915 657013 -20489695 + Gypsy12A_LTR LTR Gypsy 1634 1733 -547 1 590 16801 37 13 6 chr2R 657013 659170 -20487538 + Baggins1 LINE LOA 1 2173 -3280 1 590 18654 39 52 5 chr2R 659182 662196 -20484512 + Baggins1 LINE LOA 2284 5439 -14 1 590 237 79 132 0 chr2R 662197 662235 -20484473 - Baggins1 LINE LOA -6 5447 5405 1 590 29 70 0 0 chr2R 662267 662324 -20484384 + AT_rich Low_complexity Low_complexity 1 57 0 1 590 1524 180 266 31 chr2R 662353 662912 -20483796 + Gypsy12_I LTR Gypsy 2482 3171 -2375 1 590 4600 160 97 78 chr2R 663005 664466 -20482242 + G4_DM LINE Jockey 1 1488 -2368 1 590 2589 24 12 12 chr2R 664472 664806 -20481902 - G5_DM LINE Jockey 0 4856 4523 1 590 9419 41 18 48 chr2R 664794 666164 -20480544 + G4_DM LINE Jockey 1472 2800 -1056 1 590 2458 52 176 0 chr2R 666157 666521 -20480187 + G4_DM LINE Jockey 3085 3512 -344 1 590 2858 44 1 27 chr2R 666533 667068 -20479640 + QUASIMODO_LTR LTR Gypsy 1 658 0 1 590 248 133 22 0 chr2R 667185 667230 -20479478 + DM176_LTR LTR Gypsy 224 269 -238 1 590 254 190 17 0 chr2R 667349 667407 -20479301 + DM176_LTR LTR Gypsy 308 366 -141 1 590 473 157 59 25 chr2R 667424 667542 -20479166 + DMTOM1_LTR LTR Gypsy 284 405 -5 1 590 388 123 0 0 chr2R 667546 667611 -20479097 + DMTOM1_LTR LTR Gypsy 346 410 0 1 590 818 72 144 0 chr2R 667619 667772 -20478936 + G4_DM LINE Jockey 3501 3675 -181 1 590 271 181 56 0 chr2R 668426 668498 -20478210 + (CAGTT)n Simple_repeat Simple_repeat 2 77 0 1 590 26 88 0 0 chr2R 670164 670232 -20476476 + AT_rich Low_complexity Low_complexity 1 68 0 1 590 21 36 0 0 chr2R 670260 670288 -20476420 + AT_rich Low_complexity Low_complexity 1 28 0 1 590 283 261 0 0 chr2R 671485 671554 -20475154 + DIVER2_I LTR Pao 2891 2959 -1188 1 590 237 210 16 0 chr2R 671749 671811 -20474897 + DNAREP1_DM LINE Penelope 532 594 0 1 590 270 209 72 122 chr2R 671889 672069 -20474639 + DNAREP1_DM LINE Penelope 120 290 -304 1 590 252 213 163 41 chr2R 672102 672200 -20474508 + PENELOPE LINE Penelope 3934 4043 -118 1 590 2172 59 191 15 chr2R 672972 673692 -20473016 - PROTOP_B DNA P -308 845 1 1 590 22 0 0 0 chr2R 676189 676211 -20470497 + AT_rich Low_complexity Low_complexity 1 22 0 1 590 345 98 48 16 chr2R 676380 676442 -20470266 - DM297_LTR LTR Gypsy 0 414 351 1 590 705 268 206 21 chr2R 676854 677228 -20469480 - TOM_I LTR Gypsy -335 5777 5335 1 590 574 262 95 23 chr2R 677351 677699 -20469009 - DM297_I LTR Gypsy -1237 4930 4558 1 590 1750 153 65 41 chr2R 677686 678104 -20468604 - DM297_I LTR Gypsy -1720 4447 3921 1 590 723 135 41 7 chr2R 678131 678276 -20468432 - DM297_I LTR Gypsy -2641 3526 3339 1 590 4105 186 86 31 chr2R 678302 679722 -20466986 - DM297_I LTR Gypsy -2863 3304 1723 1 590 14730 44 57 12 chr2R 679728 682011 -20464697 - Baggins1 LINE LOA 0 5453 3069 1 590 10087 122 66 17 chr2R 682425 684150 -20462558 - DMRT1A LINE R1 -40 5143 3334 1 590 678 185 89 99 chr2R 684190 684462 -20462246 - DMRT1A LINE R1 -4858 325 57 1 590 362 200 0 0 chr2R 684480 684555 -20462153 - NINJA_I LTR Pao -2504 3507 3433 1 590 782 134 16 0 chr2R 684553 684680 -20462028 - NINJA_I LTR Pao -2840 3171 3043 1 590 365 111 0 0 chr2R 684678 684732 -20461976 - NINJA_I LTR Pao -4216 1795 1742 1 590 1296 200 71 7 chr2R 684738 685035 -20461673 - NINJA_I LTR Pao -4374 1637 1322 1 590 500 219 58 26 chr2R 685034 685189 -20461519 + G_DM LINE Jockey 3887 4046 -300 1 590 3898 177 34 6 chr2R 685223 686026 -20460682 + FW_DM LINE Jockey 2288 3112 -1580 1 590 522 174 66 0 chr2R 686071 686192 -20460516 + FW_DM LINE Jockey 3290 3418 -1274 1 590 1296 107 117 52 chr2R 686207 686716 -20459992 - DNAREP1_DM LINE Penelope -13 581 1 1 590 1120 176 203 0 chr2R 686735 687030 -20459678 - DMCR1A LINE CR1 -26 4444 4090 1 590 3721 129 159 1 chr2R 687038 687731 -20458977 - DMCR1A LINE CR1 -564 3906 3105 1 590 408 155 0 0 chr2R 687721 687792 -20458916 - DMRT1C LINE R1 -4094 1349 1279 1 590 6884 104 28 10 chr2R 687793 688887 -20457821 - DMRT1C LINE R1 -4329 1114 1 1 590 1348 103 0 8 chr2R 688918 689154 -20457554 - S_DM DNA Tc1 0 1736 1503 1 590 383 114 0 12 chr2R 689205 689285 -20457423 + FB4_DM DNA Tc1 3439 3517 -572 1 590 946 127 168 0 chr2R 689298 689518 -20457190 - DNAREP1_DM LINE Penelope -336 258 2 1 590 276 176 0 0 chr2R 689513 689564 -20457144 - Gypsy10_I LTR Gypsy -2352 2926 2876 1 590 1384 181 50 38 chr2R 689573 690049 -20456659 - FB4_DM DNA Tc1 -3222 867 336 1 590 688 73 261 22 chr2R 690049 690229 -20456479 + Mariner2_DM DNA Tc1 2 224 -688 1 590 1007 68 0 0 chr2R 690252 690384 -20456324 + Mariner2_DM DNA Tc1 304 435 -477 1 590 8907 81 27 75 chr2R 691120 692694 -20454014 + BARI1 DNA Tc1 186 1684 -66 1 590 14316 44 59 7 chr2R 692708 695201 -20451507 - Baggins1 LINE LOA -548 4905 2284 1 590 16725 40 13 6 chr2R 695213 697370 -20449338 - Baggins1 LINE LOA -3280 2173 1 1 590 368 156 41 20 chr2R 697370 697468 -20449240 - Gypsy12A_LTR LTR Gypsy -547 1733 1634 1 590 2232 23 0 0 chr2R 697474 697740 -20448968 - Invader2_LTR LTR Gypsy 0 266 1 1 590 4672 21 0 8 chr2R 697740 698363 -20448345 - Invader2_I LTR Gypsy 0 4592 3975 1 590 25731 7 19 8 chr2R 698352 701526 -20445182 - Invader2_I LTR Gypsy -1386 3206 1 1 590 2223 23 0 0 chr2R 701526 701792 -20444916 - Invader2_LTR LTR Gypsy 0 266 1 1 590 29 47 0 0 chr2R 701796 701839 -20444869 + AT_rich Low_complexity Low_complexity 1 43 0 1 590 447 128 18 89 chr2R 701839 701951 -20444757 - Gypsy12A_LTR LTR Gypsy -667 1613 1510 1 590 213 65 0 0 chr2R 701951 701982 -20444726 + (TATAA)n Simple_repeat Simple_repeat 3 33 0 1 590 1219 182 50 77 chr2R 701997 702414 -20444294 - Gypsy12A_LTR LTR Gypsy -866 1414 1009 1 590 1096 176 5 5 chr2R 702652 702858 -20443850 - Gypsy2_LTR LTR Gypsy -147 206 1 1 590 224 164 26 52 chr2R 704335 704412 -20442296 + (TTATA)n Simple_repeat Simple_repeat 2 76 0 1 590 678 139 0 0 chr2R 707522 707630 -20439078 + DNAREP1_DM LINE Penelope 7 114 -480 1 590 987 262 62 26 chr2R 707633 708154 -20438554 + ZAM_I LTR Gypsy 4258 4975 -2717 1 590 2697 59 45 10 chr2R 709206 709602 -20437106 + DMTOM1_LTR LTR Gypsy 1 410 0 1 590 553 131 122 8 chr2R 709908 710031 -20436677 + DNAREP1_DM LINE Penelope 143 279 -315 1 590 1251 158 17 14 chr2R 710062 710351 -20436357 - FB4_DM DNA Tc1 -328 3761 3472 1 590 1030 124 119 0 chr2R 710352 710548 -20436160 + DNAREP1_DM LINE Penelope 35 255 -339 1 590 274 100 0 0 chr2R 710548 710588 -20436120 + DNAREP1_DM LINE Penelope 1 40 -554 1 590 335 280 290 26 chr2R 710705 710963 -20435745 + Gypsy10_LTR LTR Gypsy 39 364 0 1 590 48 0 0 0 chr2R 712017 712065 -20434643 + AT_rich Low_complexity Low_complexity 1 48 0 1 590 43 0 0 0 chr2R 712967 713010 -20433698 + AT_rich Low_complexity Low_complexity 1 43 0 1 590 1250 164 160 63 chr2R 713671 714206 -20432502 - DNAREP1_DM LINE Penelope -127 467 6 1 590 1797 191 111 9 chr2R 714281 714854 -20431854 - DMCR1A LINE CR1 -890 3580 2949 1 590 1503 214 140 92 chr2R 714856 715613 -20431095 - DMCR1A LINE CR1 -1651 2819 2027 1 590 1964 147 93 42 chr2R 715671 716283 -20430425 + DNAREP1_DM LINE Penelope 120 594 0 1 590 24 32 0 0 chr2R 716499 716530 -20430178 + AT_rich Low_complexity Low_complexity 1 31 0 1 590 401 234 59 37 chr2R 717648 717803 -20428905 + Gypsy8_I LTR Gypsy 1821 1951 -2396 1 590 3991 29 60 9 chr2R 717865 718394 -20428314 + PROTOP DNA P 2 557 -3923 1 590 5621 36 1 2 chr2R 718383 719454 -20427254 + PROTOP DNA P 3373 4106 -374 1 590 4711 171 99 15 chr2R 719454 720443 -20426265 + GTWIN_I LTR Gypsy 3889 4960 -1461 1 590 865 226 5 10 chr2R 720463 720660 -20426048 + GTWIN_I LTR Gypsy 5271 5466 -955 1 590 25 31 0 0 chr2R 720686 720718 -20425990 + AT_rich Low_complexity Low_complexity 1 32 0 1 590 247 220 17 0 chr2R 720723 720782 -20425926 + Gypsy_LTR LTR Gypsy 31 90 -392 1 590 16739 36 17 6 chr2R 721075 723224 -20423484 + Baggins1 LINE LOA 1 2173 -3280 1 590 4623 34 0 0 chr2R 723236 723760 -20422948 + Baggins1 LINE LOA 2284 2807 -2646 1 590 3889 37 37 0 chr2R 723761 724224 -20422484 + Baggins1 LINE LOA 3004 3483 -1970 1 590 420 278 30 0 chr2R 724216 724349 -20422359 - DMRT1B LINE R1 -4319 864 728 1 590 909 233 72 28 chr2R 724349 724717 -20421991 - DMRT1B LINE R1 -4842 341 1 1 590 401 168 44 125 chr2R 724736 724872 -20421836 + Gypsy_LTR LTR Gypsy 141 265 -217 1 590 1529 206 256 2 chr2R 724990 725598 -20421110 - DMRT1B LINE R1 -4421 762 1 1 590 518 314 127 23 chr2R 725763 726331 -20420377 + BLASTOPIA_I LTR Gypsy 3345 3971 -510 1 590 5270 21 0 2 chr2R 726432 727043 -20419665 - TRANSIB2 DNA Transib 0 2844 2235 1 590 7041 36 0 3 chr2R 727033 727897 -20418811 - TRANSIB2 DNA Transib -1983 861 1 1 590 228 306 65 36 chr2R 728030 728169 -20418539 + BLASTOPIA_I LTR Gypsy 4339 4481 0 1 590 1300 196 42 80 chr2R 728574 728974 -20417734 + DNAREP1_DM LINE Penelope 104 488 -106 1 590 1063 146 33 102 chr2R 729062 729306 -20417402 + DMLTR5 LTR Gypsy 40 266 0 1 590 2188 97 52 14 chr2R 729305 729651 -20417057 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 1 590 31 44 0 0 chr2R 729666 729711 -20416997 + AT_rich Low_complexity Low_complexity 1 45 0 1 590 27559 139 49 9 chr2R 729873 734334 -20412374 + HMSBEAGLE_I LTR Gypsy 1212 5850 -679 1 590 1318 214 129 124 chr2R 734683 735239 -20411469 + HMSBEAGLE_I LTR Gypsy 5810 6368 -161 1 590 356 143 27 67 chr2R 735473 735548 -20411160 + HMSBEAGLE_I LTR Gypsy 6334 6405 -124 1 590 889 127 0 0 chr2R 735647 735773 -20410935 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 1 590 1058 188 0 145 chr2R 735773 736084 -20410624 + DMLTR5 LTR Gypsy 1 266 0 1 590 22 35 0 0 chr2R 736084 736113 -20410595 + AT_rich Low_complexity Low_complexity 1 29 0 1 590 230 297 51 51 chr2R 738447 738603 -20408105 - MDG1_I LTR Gypsy -2720 3876 3721 1 590 285 286 0 0 chr2R 740419 740524 -20406184 + T-rich Low_complexity Low_complexity 1 105 0 1 590 208 161 0 31 chr2R 742386 742450 -20404258 + (CATA)n Simple_repeat Simple_repeat 1 62 0 1 590 729 78 10 0 chr2R 742531 742634 -20404074 + DNAREP1_DM LINE Penelope 491 594 0 1 590 10458 44 40 36 chr2R 743320 744723 -20401985 + ROOA_I LTR Pao 445 1853 -4996 1 590 5109 45 55 2 chr2R 744727 745369 -20401339 + ROOA_I LTR Pao 2062 2737 -4112 1 590 9905 33 15 3 chr2R 745361 746538 -20400170 + ROOA_I LTR Pao 3078 4268 -2581 1 590 7727 35 14 0 chr2R 746535 747442 -20399266 + ROOA_I LTR Pao 4427 5346 -1503 1 590 419 89 0 0 chr2R 747693 747749 -20398959 + ROOA_I LTR Pao 5372 5427 -1422 1 590 17289 18 15 12 chr2R 747759 749795 -20396913 - G6_DM LINE Jockey 0 2042 1 1 590 5792 27 37 2 chr2R 749794 751047 -20395661 + ROOA_I LTR Pao 5417 6747 -102 1 590 48698 8 2 2 chr2R 751047 756402 -20390306 - R1_DM LINE R1 0 5356 1 1 590 229 0 0 0 chr2R 756402 756427 -20390281 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2608 1 590 984 19 0 0 chr2R 756430 756538 -20390170 + ROOA_I LTR Pao 6735 6842 -7 1 590 448 81 0 0 chr2R 756554 756616 -20390092 + ROOA_LTR LTR Pao 1 62 -324 1 590 1393 35 0 34 chr2R 756606 756781 -20389927 + ROOA_LTR LTR Pao 218 386 0 1 590 285 234 0 15 chr2R 756813 756878 -20389830 + Gypsy3_I LTR Gypsy 1101 1164 -5013 1 590 451 293 31 31 chr2R 756866 757028 -20389680 + Gypsy3_I LTR Gypsy 3914 4075 -2102 1 590 500 265 93 11 chr2R 757397 757654 -20389054 + Gypsy9_I LTR Gypsy 3833 4081 -596 1 590 4432 8 0 2 chr2R 758269 758758 -20387950 - R1_DM LINE R1 -2422 2934 2447 1 590 2783 0 0 0 chr2R 759215 759519 -20387189 + Gypsy8_LTR LTR Gypsy 1 304 0 1 590 39691 0 0 0 chr2R 759519 763866 -20382842 + Gypsy8_I LTR Gypsy 1 4347 0 1 590 1941 58 99 21 chr2R 763867 764149 -20382559 + Gypsy8_LTR LTR Gypsy 1 304 0 1 590 231 273 0 0 chr2R 764932 764998 -20381710 + QUASIMODO_I LTR Gypsy 2346 2411 -3649 1 590 189 0 0 0 chr2R 766493 766514 -20380194 + (TTATG)n Simple_repeat Simple_repeat 3 23 0 1 590 913 93 147 65 chr2R 766694 766878 -20379830 - DNAREP1_DM LINE Penelope -52 542 344 1 590 1916 94 0 4 chr2R 767609 767887 -20378821 + DMCR1A LINE CR1 4028 4304 -166 1 590 2098 145 121 56 chr2R 767887 768387 -20378321 - DNAREP1_DM LINE Penelope 0 594 91 1 590 459 97 0 0 chr2R 768591 768653 -20378055 - DNAREP1_DM LINE Penelope -1 593 532 1 590 347 118 0 0 chr2R 768643 768694 -20378014 - DNAREP1_DM LINE Penelope -542 52 2 1 590 380 97 0 0 chr2R 768688 768750 -20377958 - DNAREP1_DM LINE Penelope -452 142 81 1 590 44100 3 0 0 chr2R 768757 773468 -20373240 + BS2 LINE Jockey 11 4721 0 1 590 213 39 0 0 chr2R 773474 773500 -20373208 + (A)n Simple_repeat Simple_repeat 1 26 0 1 590 458 79 360 0 chr2R 773741 773830 -20372878 + DNAREP1_DM LINE Penelope 446 566 -28 1 590 654 78 653 5 chr2R 773829 774023 -20372685 + DNAREP1_DM LINE Penelope 275 593 -1 1 590 2210 67 104 9 chr2R 775401 775746 -20370962 + Jockey2 LINE Jockey 3016 3393 -35 1 590 189 0 0 0 chr2R 775746 775767 -20370941 + (TTTAA)n Simple_repeat Simple_repeat 3 23 0 1 590 1056 176 128 81 chr2R 776232 776590 -20370118 - Gypsy3_LTR LTR Gypsy -22 376 2 1 590 954 110 159 0 chr2R 776601 776783 -20369925 - S_DM DNA Tc1 0 1736 1526 1 590 3097 128 21 0 chr2R 776784 777252 -20369456 - S_DM DNA Tc1 -741 995 518 1 590 1399 96 151 0 chr2R 777252 777470 -20369238 - Gypsy7_LTR LTR Gypsy 0 251 1 1 590 43199 1 0 0 chr2R 777470 782454 -20364254 - Gypsy7_I LTR Gypsy 0 4984 1 1 590 2168 0 0 0 chr2R 782454 782705 -20364003 - Gypsy7_LTR LTR Gypsy 0 251 1 1 590 2306 146 74 2 chr2R 782705 783191 -20363517 - S_DM DNA Tc1 -1215 521 1 1 590 555 198 75 24 chr2R 783635 783847 -20362861 - Gypsy11_I LTR Gypsy -221 3303 3081 1 590 219 132 44 0 chr2R 783902 783970 -20362738 + (TTA)n Simple_repeat Simple_repeat 1 71 0 1 590 854 223 50 0 chr2R 784041 784279 -20362429 + MDG1_I LTR Gypsy 2281 2530 -4066 1 590 379 218 0 0 chr2R 784360 784447 -20362261 + MDG1_I LTR Gypsy 2816 2902 -3694 1 590 480 203 138 26 chr2R 784465 784617 -20362091 + MDG1_I LTR Gypsy 3101 3269 -3327 1 590 789 172 0 26 chr2R 784611 784766 -20361942 + MDG1_I LTR Gypsy 4402 4552 -2044 1 590 260 231 75 101 chr2R 784773 784932 -20361776 + Gypsy8_LTR LTR Gypsy 1 155 -149 1 590 754 206 202 0 chr2R 784965 785203 -20361505 + TABOR_I LTR Gypsy 4583 4868 -1468 1 590 656 220 33 17 chr2R 785488 785668 -20361040 + DIVER2_I LTR Pao 2242 2424 -1723 1 591 21 36 0 0 chr2R 786638 786666 -20360042 + AT_rich Low_complexity Low_complexity 1 28 0 1 591 231 306 10 30 chr2R 787439 787540 -20359168 + Gypsy12_I LTR Gypsy 4624 4722 -824 1 591 251 306 0 0 chr2R 787650 787722 -20358986 + Gypsy12_I LTR Gypsy 4981 5052 -494 1 591 22 70 0 0 chr2R 788458 788501 -20358207 + AT_rich Low_complexity Low_complexity 1 43 0 1 591 559 192 8 0 chr2R 788544 788669 -20358039 - DNAREP1_DM LINE Penelope -468 126 1 1 591 415 220 59 0 chr2R 788814 788932 -20357776 - Gypsy11_I LTR Gypsy -532 2992 2868 1 591 497 136 126 0 chr2R 788948 789051 -20357657 - Stalker2_I LTR Gypsy -1575 5827 5712 1 591 23 0 0 0 chr2R 789491 789514 -20357194 + AT_rich Low_complexity Low_complexity 1 23 0 1 591 22 0 0 0 chr2R 789839 789861 -20356847 + AT_rich Low_complexity Low_complexity 1 22 0 1 591 1204 101 92 0 chr2R 789886 790093 -20356615 - Gypsy12A_LTR LTR Gypsy -84 2196 1971 1 591 921 114 9 60 chr2R 790143 790358 -20356350 - Gypsy12A_LTR LTR Gypsy -446 1834 1631 1 591 366 111 14 14 chr2R 790348 790421 -20356287 - Gypsy12A_LTR LTR Gypsy -919 1361 1289 1 591 1518 104 16 12 chr2R 790451 790705 -20356003 - Gypsy12A_LTR LTR Gypsy -989 1291 1037 1 591 5597 43 83 1 chr2R 790706 791944 -20354764 + G4_DM LINE Jockey 2517 3856 0 1 591 2193 160 39 41 chr2R 791963 792446 -20354262 - Gypsy12A_LTR LTR Gypsy -1640 640 159 1 591 300 222 14 0 chr2R 792665 792737 -20353971 - MDG3_I LTR Gypsy -1116 3870 3798 1 591 379 328 46 11 chr2R 792810 793072 -20353636 - MDG3_I LTR Gypsy -1520 3466 3196 1 591 734 115 162 8 chr2R 793104 793344 -20353364 + DNAREP1_DM LINE Penelope 226 594 0 1 591 292 284 61 18 chr2R 793385 793550 -20353158 - Invader3_I LTR Gypsy -1728 3160 2989 1 591 29 28 0 0 chr2R 793894 793930 -20352778 + AT_rich Low_complexity Low_complexity 1 36 0 1 591 1598 120 164 123 chr2R 793987 794443 -20352265 - DNAREP1_DM LINE Penelope -119 475 1 1 591 862 174 123 159 chr2R 795322 795705 -20351003 - DNAREP1_DM LINE Penelope -2 592 224 1 591 807 125 13 7 chr2R 795821 795974 -20350734 - DNAREP1_DM LINE Penelope -439 155 2 1 591 285 61 245 0 chr2R 796226 796275 -20350433 + DNAREP1_DM LINE Penelope 534 594 0 1 591 662 164 0 0 chr2R 797134 797250 -20349458 + DMRT1A LINE R1 3762 3877 -1306 1 591 764 206 318 26 chr2R 797272 797749 -20348959 + DMRT1A LINE R1 3954 4569 -614 1 591 274 198 53 32 chr2R 797761 797855 -20348853 + DMCR1A LINE CR1 376 471 -3999 1 591 410 264 171 0 chr2R 797891 798031 -20348677 + DOC2_DM LINE Jockey 1364 1527 -3213 1 591 1566 86 13 0 chr2R 798279 798511 -20348197 + Invader2_LTR LTR Gypsy 32 266 0 1 591 2459 40 3 6 chr2R 798512 798860 -20347848 + Invader2_I LTR Gypsy 2 348 -4244 1 591 9773 25 2 9 chr2R 798831 800095 -20346613 + Invader2_I LTR Gypsy 3337 4592 0 1 591 2003 46 19 0 chr2R 800095 800356 -20346352 + Invader2_LTR LTR Gypsy 1 266 0 1 591 343 256 14 3 chr2R 800418 800533 -20346175 + DOC2_DM LINE Jockey 2599 2758 -2035 1 591 463 291 152 21 chr2R 800587 800917 -20345791 + DOC2_DM LINE Jockey 3342 3714 -1079 1 591 463 242 5 19 chr2R 800990 801138 -20345570 + DOC2_DM LINE Jockey 4313 4422 -371 1 591 799 165 128 0 chr2R 801313 801477 -20345231 + DMCR1A LINE CR1 564 748 -3722 1 591 292 271 0 0 chr2R 801491 801576 -20345132 + DMCR1A LINE CR1 825 909 -3561 1 591 202 159 30 60 chr2R 801616 801683 -20345025 + (TAAA)n Simple_repeat Simple_repeat 2 66 0 1 591 26 30 0 0 chr2R 801713 801746 -20344962 + AT_rich Low_complexity Low_complexity 1 33 0 1 591 2085 191 193 35 chr2R 801746 802398 -20344310 - GTWIN_I LTR Gypsy -2185 4236 3482 1 591 278 255 11 11 chr2R 803996 804091 -20342617 - DNAREP1_DM LINE Penelope -220 374 280 1 591 1190 103 59 0 chr2R 804105 804309 -20342399 + DNAREP1_DM LINE Penelope 18 233 -361 1 591 232 80 0 107 chr2R 805698 805754 -20340954 + (CTATA)n Simple_repeat Simple_repeat 2 51 0 1 591 2331 81 18 3 chr2R 805754 806135 -20340573 - S_DM DNA Tc1 -1244 492 106 1 591 2410 38 0 22 chr2R 806135 806459 -20340249 - NINJA_LTR LTR Pao 0 317 1 1 591 21714 22 59 2 chr2R 806459 809236 -20337472 - NINJA_I LTR Pao -24 5987 3051 1 591 12251 21 79 2 chr2R 809236 810834 -20335874 - NINJA_I LTR Pao -3252 2759 1039 1 591 1801 39 0 16 chr2R 810835 811093 -20335615 - NINJA_I LTR Pao -5703 308 55 1 591 313 135 0 0 chr2R 811111 811163 -20335545 - DNAREP1_DM LINE Penelope -3 591 540 1 591 252 354 55 42 chr2R 811362 811742 -20334966 + POGO DNA Pogo 362 746 -1375 1 591 614 182 40 74 chr2R 812140 812337 -20334371 - DNAREP1_DM LINE Penelope -262 332 82 1 591 532 75 105 11 chr2R 812334 812429 -20334279 - DNAREP1_DM LINE Penelope -442 152 49 1 591 8387 13 0 16 chr2R 812467 813498 -20333210 + DOC LINE Jockey 32 1046 -3679 1 591 27836 5 0 2 chr2R 813500 816768 -20329940 + DOC LINE Jockey 1463 4724 -1 1 591 296 70 0 0 chr2R 816774 816817 -20329891 - DNAREP1_DM LINE Penelope -551 43 1 1 591 657 174 0 20 chr2R 817655 817802 -20328906 + Gypsy8_I LTR Gypsy 1988 2131 -2216 1 591 943 158 64 44 chr2R 817885 818136 -20328572 - Transib-N1_DM DNA Transib -7 507 252 1 591 356 133 0 96 chr2R 818179 818262 -20328446 + G7_DM LINE Jockey 664 738 -454 1 591 10487 0 0 0 chr2R 818277 819469 -20327239 + G7_DM LINE Jockey 1 1192 0 1 591 251 298 57 0 chr2R 820387 820511 -20326197 - DMRT1C LINE R1 -2047 3396 3266 1 591 311 273 57 8 chr2R 820734 820856 -20325852 - DMRT1C LINE R1 -4411 1032 905 1 591 227 211 98 71 chr2R 821938 822050 -20324658 - TABOR_LTR LTR Gypsy -391 115 1 1 591 358 91 0 0 chr2R 822050 822096 -20324612 - DM412 LTR Gypsy -110 6787 6742 1 591 30 45 0 0 chr2R 822176 822220 -20324488 + AT_rich Low_complexity Low_complexity 1 44 0 1 591 1266 217 5 11 chr2R 822259 822636 -20324072 - Gypsy11_I LTR Gypsy -140 3384 3010 1 591 2215 167 2 7 chr2R 822635 823094 -20323614 - DM412 LTR Gypsy -1110 5787 5331 1 591 7674 188 21 7 chr2R 823097 825041 -20321667 - DM412 LTR Gypsy -1727 5170 3445 1 591 267 183 98 71 chr2R 825259 825371 -20321337 - TABOR_LTR LTR Gypsy -391 115 1 1 591 758 120 17 0 chr2R 825386 825503 -20321205 - DMCR1A LINE CR1 -15 4455 4337 1 591 229 286 0 0 chr2R 828870 828926 -20317782 - HMSBEAGLE_I LTR Gypsy -3079 3450 3395 1 591 589 85 0 69 chr2R 828989 829090 -20317618 + DNAREP1_DM LINE Penelope 301 394 -200 1 591 880 209 95 12 chr2R 829119 829371 -20317337 + PROTOP_B DNA P 859 1131 -22 1 591 342 161 0 0 chr2R 829453 829515 -20317193 + DNAREP1_DM LINE Penelope 139 200 -394 1 591 22 0 0 0 chr2R 832025 832047 -20314661 + AT_rich Low_complexity Low_complexity 1 22 0 1 591 3031 306 89 58 chr2R 832273 834883 -20311825 - Gypsy5_I LTR Gypsy -1635 4874 2183 1 591 249 211 33 158 chr2R 835732 835884 -20310824 - Gypsy8_I LTR Gypsy -45 4302 4170 1 591 262 194 0 127 chr2R 836059 836130 -20310578 - Gypsy8_I LTR Gypsy -250 4097 4036 1 591 1739 193 155 51 chr2R 836130 836600 -20310108 - Gypsy8_I LTR Gypsy -2593 1754 1236 1 591 1206 21 55 0 chr2R 836618 836763 -20309945 - DOC5_DM LINE Jockey -68 4614 4462 1 591 23 0 0 0 chr2R 837141 837164 -20309544 + AT_rich Low_complexity Low_complexity 1 23 0 1 591 276 348 22 38 chr2R 837829 838014 -20308694 + DNAREP1_DM LINE Penelope 285 466 -128 1 591 21 0 0 0 chr2R 838062 838083 -20308625 + AT_rich Low_complexity Low_complexity 1 21 0 1 591 8544 58 71 2 chr2R 838097 839248 -20307460 - DMCR1A LINE CR1 -58 4412 3182 1 591 10425 49 69 1 chr2R 839241 840780 -20305928 - DMCR1A LINE CR1 -1487 2983 1341 1 591 969 53 15 8 chr2R 840762 840894 -20305814 - DMCR1A LINE CR1 -3484 986 854 1 591 549 44 0 0 chr2R 840891 840959 -20305749 - DMCR1A LINE CR1 -3062 1408 1341 1 591 2071 71 87 3 chr2R 840941 841239 -20305469 - DMCR1A LINE CR1 -3484 986 664 1 591 3239 87 41 70 chr2R 841231 842009 -20304699 - G7_DM LINE Jockey -542 650 1 1 591 14467 44 55 0 chr2R 844733 846516 -20300192 - Copia2_I LTR Copia -289 3873 1992 1 591 2806 30 12 3 chr2R 846514 846845 -20299863 - Copia2_I LTR Copia -2434 1728 1395 1 591 1842 51 51 8 chr2R 846846 847083 -20299625 - S2_DM DNA Tc1 -831 904 658 1 591 2369 56 0 3 chr2R 847070 847376 -20299332 + DMCR1A LINE CR1 4120 4424 -46 1 591 3546 61 95 4 chr2R 847365 847872 -20298836 - S2_DM DNA Tc1 -1182 553 1 1 591 1610 119 28 0 chr2R 847886 848138 -20298570 - Gypsy9_LTR LTR Gypsy 0 336 78 1 591 3567 78 40 18 chr2R 848166 848664 -20298044 - Gypsy9_I LTR Gypsy 0 4677 4169 1 591 12693 22 5 0 chr2R 848664 850091 -20296617 - DMRT1A LINE R1 -11 5172 3739 1 591 10487 18 2 2 chr2R 850090 851271 -20295437 - DMRT1A LINE R1 -1639 3544 2363 1 591 6005 155 85 10 chr2R 851246 852560 -20294148 - Gypsy9_I LTR Gypsy -550 5738 3245 1 591 938 193 4 8 chr2R 852560 852834 -20293874 - Gypsy9_I LTR Gypsy -1434 3243 3125 1 591 285 136 69 83 chr2R 853012 853084 -20293624 - TABOR_LTR LTR Gypsy -435 71 1 1 591 2665 198 47 37 chr2R 853084 854731 -20291977 - Gypsy9_I LTR Gypsy -2605 3683 1810 1 591 455 52 0 0 chr2R 854751 854809 -20291899 - Gypsy9_I LTR Gypsy -3377 1300 1243 1 591 1837 177 68 20 chr2R 854836 855340 -20291368 - Gypsy9_I LTR Gypsy -4906 1382 845 1 591 3217 139 49 59 chr2R 855339 856014 -20290694 - Gypsy9_I LTR Gypsy -3772 905 238 1 591 655 171 123 37 chr2R 856240 856521 -20290187 - Gypsy9_I LTR Gypsy -4393 284 1 1 591 1841 132 21 0 chr2R 856521 856809 -20289899 - Gypsy9_LTR LTR Gypsy 0 336 43 1 591 496 176 14 94 chr2R 856936 857074 -20289634 + Gypsy5_LTR LTR Gypsy 1 127 -303 1 591 618 171 0 18 chr2R 858374 858487 -20288221 - DNAREP1_DM LINE Penelope -330 264 154 1 591 341 192 77 0 chr2R 858503 858581 -20288127 - Gypsy8_LTR LTR Gypsy -148 156 73 1 591 291 182 0 18 chr2R 858646 858702 -20288006 - Gypsy8_LTR LTR Gypsy -248 56 2 1 591 4949 152 46 1 chr2R 859228 860056 -20286652 + MAX_I LTR Pao 5618 6482 -1432 1 591 528 305 61 43 chr2R 860809 861138 -20285570 + HMSBEAGLE_I LTR Gypsy 5225 5559 -970 1 591 265 167 0 0 chr2R 861166 861214 -20285494 - DNAREP1_DM LINE Penelope -386 208 161 1 591 1266 145 158 32 chr2R 862737 863122 -20283586 - DNAREP1_DM LINE Penelope -240 354 1 1 591 26 64 0 0 chr2R 863566 863613 -20283095 + AT_rich Low_complexity Low_complexity 1 47 0 1 591 740 57 0 0 chr2R 863762 863850 -20282858 - HELENA_RT LINE Jockey 0 1317 1230 1 591 3830 94 127 5 chr2R 863851 864593 -20282115 - HELENA_RT LINE Jockey -444 873 42 1 591 746 280 209 29 chr2R 864639 865157 -20281551 - BS LINE Jockey -2467 2659 2049 1 591 1554 289 68 18 chr2R 865206 865880 -20280828 - BS LINE Jockey -3433 1693 986 1 591 1702 152 120 102 chr2R 866340 866822 -20279886 + Gypsy12A_LTR LTR Gypsy 3 493 -1787 1 591 873 151 37 5 chr2R 866827 867014 -20279694 + Gypsy12A_LTR LTR Gypsy 661 853 -1427 1 591 6269 122 36 93 chr2R 867013 868293 -20278415 + Gypsy12A_LTR LTR Gypsy 1072 2278 -2 1 591 725 143 55 16 chr2R 868564 868692 -20278016 + DMRT1B LINE R1 2 134 -5049 1 591 527 85 11 89 chr2R 868694 868784 -20277924 + DOC3_DM LINE Jockey 1060 1142 -3598 1 591 10279 32 31 4 chr2R 868754 869983 -20276725 + DOC3_DM LINE Jockey 2032 3293 -1447 1 591 1606 138 41 0 chr2R 869975 870244 -20276464 + DMRT1B LINE R1 367 646 -4537 1 591 1388 116 224 7 chr2R 870242 870648 -20276060 + DMRT1B LINE R1 1215 1708 -3475 1 591 2136 115 206 0 chr2R 870651 871016 -20275692 + DMRT1B LINE R1 3413 3852 -1331 1 591 2000 123 221 10 chr2R 871011 871612 -20275096 + DMRT1B LINE R1 1661 2390 -2793 1 591 6868 131 36 4 chr2R 871672 872750 -20273958 + DMRT1B LINE R1 4064 5176 -7 1 591 2062 80 140 64 chr2R 872751 873380 -20273328 + DMRT1C LINE R1 599 1275 -4168 1 591 815 64 0 0 chr2R 873375 873484 -20273224 + DMRT1C LINE R1 1396 1504 -3939 1 591 2429 50 0 0 chr2R 873520 873820 -20272888 + DMRT1C LINE R1 2084 2383 -3060 1 591 640 126 72 24 chr2R 873815 874024 -20272684 + DNAREP1_DM LINE Penelope 72 384 -210 1 591 442 188 192 39 chr2R 874027 874233 -20272475 + PROTOP_A DNA P 759 987 -118 1 591 12128 102 31 18 chr2R 874918 878016 -20268692 - FW_DM LINE Jockey -481 4211 989 1 591 27732 7 2 4 chr2R 878016 881070 -20265638 - DMRT1B LINE R1 0 5183 2136 1 591 12597 29 0 0 chr2R 881072 882518 -20264190 - FW_DM LINE Jockey -3244 1448 3 1 591 22 0 0 0 chr2R 882529 882551 -20264157 + AT_rich Low_complexity Low_complexity 1 22 0 1 591 905 233 92 6 chr2R 882664 883234 -20263474 + DM176_I LTR Gypsy 1210 1910 -4510 1 591 253 83 28 0 chr2R 883234 883270 -20263438 + DNAREP1_DM LINE Penelope 1 37 -557 1 591 1348 158 204 3 chr2R 883277 883601 -20263107 + DNAREP1_DM LINE Penelope 206 594 0 1 591 746 110 230 93 chr2R 883675 883836 -20262872 + DNAREP1_DM LINE Penelope 402 584 -10 1 591 313 324 7 20 chr2R 884015 884166 -20262542 + HMSBEAGLE_I LTR Gypsy 1746 1894 -4635 1 591 232 167 18 36 chr2R 884705 884761 -20261947 + Gypsy8_LTR LTR Gypsy 1 55 -249 1 591 316 292 74 8 chr2R 885014 885135 -20261573 + OSVALDO_I LTR Gypsy 660 788 -5865 1 591 225 246 0 0 chr2R 885336 885405 -20261303 + Gypsy8_I LTR Gypsy 230 298 -4049 1 591 278 272 37 37 chr2R 885578 885685 -20261023 + OSVALDO_I LTR Gypsy 2703 2809 -3844 1 591 318 266 25 12 chr2R 885671 885751 -20260957 + Gypsy8_I LTR Gypsy 1035 1115 -3232 1 591 982 195 361 41 chr2R 885812 886252 -20260456 + Gypsy8_I LTR Gypsy 1837 2417 -1930 1 591 1166 141 18 59 chr2R 886245 886464 -20260244 - DMCR1A LINE CR1 -1549 2921 2712 1 591 756 160 7 20 chr2R 886790 886937 -20259771 - DMCR1A LINE CR1 -2008 2462 2318 1 591 225 154 0 0 chr2R 886924 886957 -20259751 - DMCR1A LINE CR1 -2264 2206 2174 1 591 405 231 208 19 chr2R 886957 887116 -20259592 + MAX_LTR LTR Pao 2 190 -131 1 591 1229 119 172 35 chr2R 887259 887486 -20259222 + DNAREP1_DM LINE Penelope 290 547 -47 1 591 655 106 62 0 chr2R 887476 887589 -20259119 - DM297_I LTR Gypsy -2602 3565 3446 1 591 3589 170 77 20 chr2R 887610 888415 -20258293 - DM297_I LTR Gypsy -3171 2996 2146 1 591 604 150 129 0 chr2R 888426 888566 -20258142 - DM297_I LTR Gypsy -4355 1812 1655 1 591 987 169 72 0 chr2R 888638 888833 -20257875 - DM297_I LTR Gypsy -5537 630 422 1 591 280 130 49 77 chr2R 888871 889101 -20257607 - DM297_I LTR Gypsy -5870 297 1 1 591 597 80 63 22 chr2R 889105 889220 -20257488 - DM297_LTR LTR Gypsy -4 470 289 1 591 538 288 0 0 chr2R 889479 889625 -20257083 + DIVER2_I LTR Pao 435 580 -3567 1 591 351 315 23 27 chr2R 889696 889954 -20256754 + DIVER_I LTR Pao 5063 5319 -324 1 591 8251 116 100 4 chr2R 890737 892188 -20254520 + DMCR1A LINE CR1 1977 3566 -904 1 591 1093 128 376 8 chr2R 892195 892673 -20254035 + DMCR1A LINE CR1 3686 4339 -131 1 591 1232 107 63 40 chr2R 892675 892898 -20253810 - DNAREP1_DM LINE Penelope -3 591 364 1 591 688 154 0 23 chr2R 892905 893038 -20253670 + DMCR1A LINE CR1 2333 2462 -2008 1 591 1077 120 0 22 chr2R 893404 893583 -20253125 + DMCR1A LINE CR1 2747 2921 -1549 1 591 884 195 357 40 chr2R 893576 894016 -20252692 - Gypsy8_I LTR Gypsy -1930 2417 1837 1 591 290 266 25 12 chr2R 894077 894157 -20252551 - Gypsy8_I LTR Gypsy -3232 1115 1035 1 591 235 267 14 14 chr2R 894143 894250 -20252458 - OSVALDO_I LTR Gypsy -2460 3828 3761 1 591 689 323 10 7 chr2R 894297 894602 -20252106 - OSVALDO_I LTR Gypsy -4241 2412 2107 1 591 1173 224 43 34 chr2R 894756 895107 -20251601 - Gypsy8_I LTR Gypsy -3358 989 636 1 591 2721 178 198 6 chr2R 895144 896145 -20250563 + MAX_I LTR Pao 1692 2883 -5031 1 591 315 91 0 0 chr2R 896147 896191 -20250517 + MAX_I LTR Pao 3397 3440 -4474 1 591 11297 43 14 25 chr2R 897690 899283 -20247425 - DOC5_DM LINE Jockey -143 4539 2964 1 591 4869 46 86 2 chr2R 899283 900439 -20246269 - DOC5_DM LINE Jockey -2015 2667 1415 1 591 3351 49 8 2 chr2R 900437 900907 -20245801 - DOC5_DM LINE Jockey -3473 1209 737 1 591 3348 75 31 19 chr2R 901008 901523 -20245185 - Transib5 DNA Transib 0 3001 2481 1 591 797 92 463 0 chr2R 901514 901741 -20244967 - Transib5 DNA Transib -710 2291 1960 1 591 3249 19 10 10 chr2R 901728 902142 -20244566 - Transib5 DNA Transib -1731 1270 857 1 591 897 55 87 0 chr2R 902167 902290 -20244418 + PROTOP_B DNA P 1 134 -1019 1 591 9133 15 1 1 chr2R 902290 903395 -20243313 - PROTOP_A DNA P 0 1105 1 1 591 797 21 0 0 chr2R 903395 903491 -20243217 + PROTOP_B DNA P 128 223 -930 1 591 2454 50 0 3 chr2R 903485 903804 -20242904 + PROTOP_B DNA P 836 1153 0 1 591 4336 60 117 18 chr2R 903830 904571 -20242137 - Transib5 DNA Transib -2186 815 1 1 591 431 205 177 65 chr2R 904697 904974 -20241734 - G_DM LINE Jockey -146 4200 3893 1 591 358 269 110 0 chr2R 904961 905106 -20241602 - G_DM LINE Jockey -1304 3042 2882 1 591 316 205 13 0 chr2R 905216 905294 -20241414 - Gypsy8_I LTR Gypsy -4268 79 1 1 591 398 221 0 105 chr2R 905302 905454 -20241254 - Gypsy8_LTR LTR Gypsy -8 296 161 1 591 687 289 138 23 chr2R 905592 905939 -20240769 - G2_DM LINE Jockey -2567 535 149 1 591 2892 45 5 0 chr2R 906343 906722 -20239986 + ROOA_LTR LTR Pao 6 386 0 1 591 921 192 113 91 chr2R 907342 907715 -20238993 - Gypsy3_LTR LTR Gypsy -17 381 1 1 591 2060 115 18 6 chr2R 909891 910232 -20236476 + Gypsy12A_LTR LTR Gypsy 51 395 -1885 1 591 329 108 149 0 chr2R 910679 910753 -20235955 + Gypsy12A_LTR LTR Gypsy 1474 1558 -722 1 591 42 20 0 0 chr2R 910782 910831 -20235877 + AT_rich Low_complexity Low_complexity 1 49 0 1 591 22 56 0 0 chr2R 910875 910911 -20235797 + AT_rich Low_complexity Low_complexity 1 36 0 1 591 2513 118 70 2 chr2R 910913 911354 -20235354 + Gypsy12A_LTR LTR Gypsy 1810 2280 0 1 591 210 203 14 14 chr2R 912122 912192 -20234516 + (TTATA)n Simple_repeat Simple_repeat 3 72 0 1 591 5812 152 128 17 chr2R 912226 913434 -20233274 + MAX_I LTR Pao 3500 4840 -3074 1 591 1532 186 116 0 chr2R 913441 913785 -20232923 + MAX_I LTR Pao 5488 5871 -2043 1 591 2111 108 11 0 chr2R 913919 914271 -20232437 + DMCR1A LINE CR1 3973 4328 -142 1 591 2398 45 110 0 chr2R 914296 914632 -20232076 + PROTOP_B DNA P 1 373 -780 1 591 1757 80 38 9 chr2R 914658 914973 -20231735 + PROTOP_B DNA P 539 862 -291 1 591 554 43 0 0 chr2R 914970 915039 -20231669 + PROTOP_B DNA P 1085 1153 0 1 591 849 145 38 242 chr2R 915048 915420 -20231288 - DNAREP1_DM LINE Penelope -96 498 123 1 591 738 304 0 0 chr2R 915746 915993 -20230715 - NOMAD_I LTR Gypsy -1781 4791 4545 1 591 402 179 225 29 chr2R 916308 916446 -20230262 + PROTOP_B DNA P 47 211 -942 1 592 24 0 0 0 chr2R 920798 920822 -20225886 + AT_rich Low_complexity Low_complexity 1 24 0 1 592 320 331 69 41 chr2R 921036 921787 -20224921 - Gypsy5_I LTR Gypsy -1635 4874 4103 1 592 835 102 16 0 chr2R 921873 922001 -20224707 + DOC3_DM LINE Jockey 2445 2574 -2166 1 592 9163 30 50 1 chr2R 922004 923187 -20223521 + DOC3_DM LINE Jockey 3379 4619 -121 1 592 1103 317 123 15 chr2R 923230 924175 -20222533 - ZAM_I LTR Gypsy -3142 4348 3302 1 592 580 0 0 0 chr2R 924294 924363 -20222345 - Invader2_LTR LTR Gypsy -197 69 1 1 592 293 241 7 50 chr2R 926528 926668 -20220040 + T-rich Low_complexity Low_complexity 2 135 0 1 592 2163 40 110 0 chr2R 927227 927526 -20219182 - Gypsy11_LTR LTR Gypsy 0 452 121 1 592 382 20 0 0 chr2R 927545 927594 -20219114 - Gypsy11_LTR LTR Gypsy -403 49 1 1 592 3883 55 8 30 chr2R 927594 928237 -20218471 - Gypsy11_I LTR Gypsy 0 3524 2896 1 592 235 306 93 0 chr2R 929389 929497 -20217211 - MAX_I LTR Pao -3491 4423 4306 1 592 241 274 0 0 chr2R 930260 930322 -20216386 - MAX_I LTR Pao -5795 2119 2058 1 592 279 192 327 0 chr2R 930995 931099 -20215609 + Invader3_LTR LTR Gypsy 75 212 -86 1 592 27 0 0 0 chr2R 931516 931543 -20215165 + AT_rich Low_complexity Low_complexity 1 27 0 1 592 3593 7 5 0 chr2R 931586 932007 -20214701 + Invader1_LTR LTR Gypsy 1 423 0 1 592 400 257 0 19 chr2R 932040 932147 -20214561 - GTWIN_LTR LTR Gypsy -324 171 67 1 592 1714 203 33 0 chr2R 932210 932569 -20214139 - LINEJ1_DM LINE Jockey -928 4092 3722 1 592 1482 150 113 72 chr2R 932666 933098 -20213610 - DNAREP1_DM LINE Penelope -142 452 3 1 592 778 150 58 23 chr2R 933335 933506 -20213202 - ACCORD2_LTR LTR Gypsy 0 215 39 1 592 14721 61 5 1 chr2R 933603 935764 -20210944 - ACCORD2_I LTR Gypsy -928 6284 3306 1 592 2736 69 55 2 chr2R 935761 936180 -20210528 - ACCORD2_I LTR Gypsy -2725 4487 4047 1 592 3011 40 16 0 chr2R 936181 936560 -20210148 + DIVER2_LTR LTR Pao 1 385 0 1 592 1218 61 0 0 chr2R 936560 936721 -20209987 + DIVER2_I LTR Pao 1 161 -3986 1 592 4141 6 2 2 chr2R 936721 937203 -20209505 - Gypsy_LTR LTR Gypsy 0 482 1 1 592 57105 1 1 0 chr2R 937203 943707 -20203001 - Gypsy_I LTR Gypsy 0 6507 1 1 592 4445 4 2 2 chr2R 943705 944187 -20202521 - Gypsy_LTR LTR Gypsy 0 482 1 1 592 16582 59 36 20 chr2R 944187 946435 -20200273 + DIVER2_I LTR Pao 158 2442 -1705 1 592 5691 23 3 16 chr2R 947446 948111 -20198597 + DIVER2_I LTR Pao 2417 3072 -1075 1 592 3849 81 2 0 chr2R 948105 948622 -20198086 - ACCORD2_I LTR Gypsy -3218 3994 3477 1 592 1608 106 11 56 chr2R 948624 948893 -20197815 - ACCORD2_I LTR Gypsy -6955 257 1 1 592 663 182 58 110 chr2R 948898 949089 -20197619 - ACCORD2_LTR LTR Gypsy -33 182 2 1 592 569 135 11 0 chr2R 949529 949618 -20197090 + DMCR1A LINE CR1 3011 3100 -1370 1 592 232 292 0 27 chr2R 949610 949684 -20197024 + OSVALDO_I LTR Gypsy 2288 2359 -4294 1 592 240 279 13 0 chr2R 949712 949791 -20196917 + STALKER4_I LTR Gypsy 4017 4096 -2434 1 592 1049 273 71 32 chr2R 949864 950242 -20196466 + OSVALDO_I LTR Gypsy 2744 3136 -3517 1 592 280 365 145 4 chr2R 950443 950685 -20196023 + OSVALDO_I LTR Gypsy 3717 3992 -2661 1 592 548 290 106 58 chr2R 950713 950988 -20195720 + Gypsy8_I LTR Gypsy 2153 2440 -1907 1 592 293 232 0 14 chr2R 951466 951536 -20195172 - NOMAD_I LTR Gypsy -4990 1582 1514 1 592 230 375 0 0 chr2R 951563 951659 -20195049 - NOMAD_I LTR Gypsy -5184 1388 1293 1 592 207 0 0 0 chr2R 952337 952360 -20194348 + (CTTAT)n Simple_repeat Simple_repeat 3 25 0 1 592 225 136 50 17 chr2R 952390 952450 -20194258 + T-rich Low_complexity Low_complexity 2 63 0 1 592 22 80 0 0 chr2R 952757 952807 -20193901 + AT_rich Low_complexity Low_complexity 1 50 0 1 592 228 250 0 0 chr2R 953147 953195 -20193513 - DIVER2_I LTR Pao -1839 2308 2261 1 592 189 94 0 0 chr2R 953673 953705 -20193003 + (CTAAA)n Simple_repeat Simple_repeat 2 33 0 1 592 23 0 0 0 chr2R 953838 953861 -20192847 + AT_rich Low_complexity Low_complexity 1 23 0 1 592 29 28 0 0 chr2R 955131 955167 -20191541 + AT_rich Low_complexity Low_complexity 1 36 0 1 592 626 204 198 0 chr2R 955278 955445 -20191263 + DMCR1A LINE CR1 1212 1411 -3059 1 592 709 192 135 0 chr2R 955443 955599 -20191109 + DMCR1A LINE CR1 2713 2889 -1581 1 592 440 119 143 0 chr2R 955610 955694 -20191014 + DMCR1A LINE CR1 2931 3026 -1444 1 592 235 93 23 23 chr2R 955793 955837 -20190871 + DNAREP1_DM LINE Penelope 170 213 -381 1 592 1455 145 155 90 chr2R 955843 956244 -20190464 - DNAREP1_DM LINE Penelope -4 590 164 1 592 357 284 42 61 chr2R 956437 956602 -20190106 - DNAREP1_DM LINE Penelope -60 534 373 1 592 1491 72 219 5 chr2R 956646 957018 -20189690 - DNAREP1_DM LINE Penelope 0 594 2 1 592 285 187 103 39 chr2R 957037 957115 -20189593 + DNAREP1_DM LINE Penelope 437 519 -75 1 592 333 175 175 0 chr2R 958248 958328 -20188380 - DNAREP1_DM LINE Penelope -31 563 470 1 592 2563 135 43 2 chr2R 958671 959088 -20187620 - DMCR1A LINE CR1 -523 3947 3514 1 592 22 0 0 0 chr2R 959291 959313 -20187395 + AT_rich Low_complexity Low_complexity 1 22 0 1 592 270 222 78 118 chr2R 961205 961358 -20185350 + Gypsy8_LTR LTR Gypsy 9 155 -149 1 592 459 170 57 0 chr2R 961369 961475 -20185233 + Gypsy8_I LTR Gypsy 5 116 -4231 1 592 893 99 158 21 chr2R 961906 962073 -20184635 + DNAREP1_DM LINE Penelope 431 594 0 1 592 443 149 356 17 chr2R 962358 962535 -20184173 + Transib-N1_DM DNA Transib 278 514 0 1 592 231 246 0 0 chr2R 962940 963001 -20183707 + G5_DM LINE Jockey 4612 4672 -184 1 592 255 246 49 0 chr2R 963991 964052 -20182656 - BEL_I LTR Pao -1630 3774 3711 1 592 1032 295 49 16 chr2R 964033 964378 -20182330 - BEL_I LTR Pao -2944 2460 2109 1 592 332 193 169 0 chr2R 964472 964555 -20182153 - BEL_I LTR Pao -3494 1910 1814 1 592 7076 41 25 1 chr2R 964566 965428 -20181280 + TC1_DM DNA Tc1 1 883 -783 1 592 1257 26 0 0 chr2R 965437 965590 -20181118 + TC1_DM DNA Tc1 1514 1666 0 1 592 251 316 0 0 chr2R 965786 965865 -20180843 - BEL_I LTR Pao -4456 948 870 1 592 520 273 14 7 chr2R 965984 966128 -20180580 - BEL_I LTR Pao -5044 360 216 1 592 336 146 0 0 chr2R 966655 966710 -20179998 - DM412 LTR Gypsy -98 6799 6745 1 592 25 75 0 0 chr2R 966761 966814 -20179894 + AT_rich Low_complexity Low_complexity 1 53 0 1 592 311 344 17 58 chr2R 966883 967124 -20179584 + NOMAD_I LTR Gypsy 3668 3898 -2674 1 592 444 335 5 5 chr2R 967139 967343 -20179365 + NOMAD_I LTR Gypsy 3982 4185 -2387 1 592 825 276 39 18 chr2R 967713 967993 -20178715 - DIVER2_I LTR Pao -3327 820 535 1 592 1841 106 80 0 chr2R 968703 969004 -20177704 - DNAREP1_DM LINE Penelope 0 594 270 1 592 2151 103 116 6 chr2R 969009 969370 -20177338 + DNAREP1_DM LINE Penelope 178 578 -16 1 592 382 123 0 0 chr2R 970567 970624 -20176084 - DNAREP1_DM LINE Penelope -537 57 1 1 592 56 16 0 0 chr2R 971020 971083 -20175625 + AT_rich Low_complexity Low_complexity 1 63 0 1 592 1022 250 78 66 chr2R 972358 972782 -20173926 - MDG1_I LTR Gypsy -1792 4804 4376 1 592 238 118 0 0 chr2R 972787 972821 -20173887 - BLOOD_I LTR Gypsy -2244 4369 4336 1 592 885 178 22 0 chr2R 973022 973207 -20173501 - CIRCE LINE Composite -1397 4959 4771 1 592 659 299 96 27 chr2R 975012 975304 -20171404 + DM1731_I LTR Copia 2600 2911 -1065 1 592 277 333 25 25 chr2R 975652 975809 -20170899 + DM1731_I LTR Copia 3309 3465 -511 1 592 1295 82 10 49 chr2R 975809 976014 -20170694 + DNAREP1_DM LINE Penelope 1 197 -397 1 592 1824 166 77 45 chr2R 976018 976459 -20170249 + DNAREP1_DM LINE Penelope 117 571 -23 1 592 189 0 0 0 chr2R 977082 977103 -20169605 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 592 394 240 10 10 chr2R 977509 977606 -20169102 + DIVER2_I LTR Pao 895 991 -3156 1 592 227 244 38 13 chr2R 977751 977830 -20168878 + Gypsy7_LTR LTR Gypsy 27 107 -144 1 592 719 158 34 14 chr2R 978434 978582 -20168126 - DNAREP1_DM LINE Penelope -239 355 205 1 592 25 31 0 0 chr2R 982571 982603 -20164105 + AT_rich Low_complexity Low_complexity 1 32 0 1 592 597 289 90 124 chr2R 983286 983954 -20162754 - NOMAD_I LTR Gypsy 0 6572 5928 1 592 322 241 35 0 chr2R 984877 984964 -20161744 - Gypsy8_I LTR Gypsy -4257 90 1 1 592 515 214 36 104 chr2R 984967 985160 -20161548 - Gypsy8_LTR LTR Gypsy -4 300 121 1 592 313 179 0 18 chr2R 985178 985235 -20161473 - Gypsy8_LTR LTR Gypsy -248 56 1 1 592 241 262 16 144 chr2R 985301 985488 -20161220 - NOMAD_I LTR Gypsy -959 5613 5451 1 592 1624 46 101 28 chr2R 985569 985816 -20160892 + BS3_DM LINE Jockey 1526 1790 0 1 592 629 311 226 13 chr2R 985820 986352 -20160356 - NOMAD_I LTR Gypsy -1444 5128 4484 1 592 10314 46 49 1 chr2R 986500 987793 -20158915 - FW2_DM LINE Jockey -489 3472 2118 1 592 14851 48 23 8 chr2R 988082 989923 -20156785 - Baggins1 LINE LOA 0 5453 3585 1 592 2583 299 11 20 chr2R 990770 991655 -20155053 + NINJA_I LTR Pao 2648 3524 -2487 1 592 3972 309 92 14 chr2R 991695 993700 -20153008 + NINJA_I LTR Pao 3733 5894 -117 1 592 889 134 19 3 chr2R 994064 994342 -20152366 - FW2_DM LINE Jockey -1839 2122 1923 1 592 363 216 113 0 chr2R 994332 994429 -20152279 - FW_DM LINE Jockey -4454 238 131 1 592 9621 39 25 0 chr2R 994508 995662 -20151046 - DOC3_DM LINE Jockey 0 4740 3558 1 592 482 286 94 18 chr2R 995751 995975 -20150733 - NOMAD_I LTR Gypsy -3450 3122 2882 1 592 292 175 18 0 chr2R 996151 996208 -20150500 - NOMAD_I LTR Gypsy -4363 2209 2152 1 592 942 343 51 7 chr2R 996249 996660 -20150048 - NOMAD_I LTR Gypsy -4683 1889 1461 1 592 21 57 0 0 chr2R 997831 997866 -20148842 + AT_rich Low_complexity Low_complexity 1 35 0 1 592 23 33 0 0 chr2R 997975 998005 -20148703 + AT_rich Low_complexity Low_complexity 1 30 0 1 592 663 342 14 8 chr2R 999240 999591 -20147117 - NOMAD_I LTR Gypsy -2950 3622 3270 1 592 1556 129 8 0 chr2R 1000060 1000316 -20146392 - DNAREP1_DM LINE Penelope -336 258 1 1 592 282 194 0 100 chr2R 1000331 1000411 -20146297 - DNAREP1_DM LINE Penelope -386 208 137 1 592 305 106 0 0 chr2R 1000414 1000461 -20146247 - DNAREP1_DM LINE Penelope -21 573 527 1 592 1466 167 154 26 chr2R 1000494 1000845 -20145863 - DNAREP1_DM LINE Penelope -155 439 44 1 592 677 138 0 0 chr2R 1000847 1000956 -20145752 - DNAREP1_DM LINE Penelope -363 231 123 1 592 1009 62 62 0 chr2R 1000968 1001114 -20145594 - DNAREP1_DM LINE Penelope -432 162 8 1 592 291 296 0 8 chr2R 1001109 1001235 -20145473 - IDEFIX_I LTR Gypsy -1793 3835 3711 1 592 1613 277 53 9 chr2R 1001297 1001865 -20144843 - IDEFIX_I LTR Gypsy -2100 3528 2936 1 592 754 273 38 19 chr2R 1002428 1002693 -20144015 + LINEJ1_DM LINE Jockey 1440 1709 -3311 1 592 589 289 159 7 chr2R 1002785 1003081 -20143627 + Jockey2 LINE Jockey 729 1069 -2359 1 592 325 295 150 26 chr2R 1003341 1003544 -20143164 + Jockey2 LINE Jockey 1639 1869 -1559 1 592 2696 126 107 50 chr2R 1003544 1004104 -20142604 + DNAREP1_DM LINE Penelope 1 592 -2 1 592 27 29 0 0 chr2R 1005336 1005370 -20141338 + AT_rich Low_complexity Low_complexity 1 34 0 1 592 791 167 77 0 chr2R 1005445 1005601 -20141107 + DNAREP1_DM LINE Penelope 8 175 -419 1 592 641 178 6 50 chr2R 1005607 1005767 -20140941 + DNAREP1_DM LINE Penelope 97 249 -345 1 592 298 203 0 15 chr2R 1005783 1005848 -20140860 + DNAREP1_DM LINE Penelope 325 388 -206 1 592 676 262 138 37 chr2R 1006003 1006328 -20140380 + Gypsy10_LTR LTR Gypsy 7 364 0 1 592 895 86 0 35 chr2R 1006803 1006948 -20139760 + DNAREP1_DM LINE Penelope 1 140 -454 1 592 447 81 0 0 chr2R 1006997 1007059 -20139649 + DNAREP1_DM LINE Penelope 348 409 -185 1 592 337 87 0 0 chr2R 1007076 1007122 -20139586 + DNAREP1_DM LINE Penelope 549 594 0 1 592 237 143 107 0 chr2R 1007081 1007137 -20139571 - P_DG DNA P -92 2796 2735 1 592 343 94 19 0 chr2R 1007437 1007490 -20139218 - DNAREP1_DM LINE Penelope -352 242 189 1 592 826 141 107 16 chr2R 1007476 1007663 -20139045 - DNAREP1_DM LINE Penelope -302 292 89 1 592 481 182 14 0 chr2R 1007813 1007961 -20138747 + (TA)n Simple_repeat Simple_repeat 1 150 0 1 592 307 226 434 42 chr2R 1008094 1008237 -20138471 + DNAREP1_DM LINE Penelope 371 569 -25 1 592 228 235 0 0 chr2R 1009229 1009297 -20137411 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 1 592 706 200 34 35 chr2R 1010866 1011171 -20135537 - DNAREP1_DM LINE Penelope -236 358 120 1 592 36 23 0 0 chr2R 1011390 1011433 -20135275 + AT_rich Low_complexity Low_complexity 1 43 0 1 592 25 31 0 0 chr2R 1011504 1011536 -20135172 + AT_rich Low_complexity Low_complexity 1 32 0 1 592 1976 112 87 0 chr2R 1011536 1011964 -20134744 - DNAREP1_DM LINE Penelope -2 592 4 1 592 27 29 0 0 chr2R 1012180 1012214 -20134494 + AT_rich Low_complexity Low_complexity 1 34 0 1 592 1100 175 37 19 chr2R 1012380 1012648 -20134060 + DNAREP1_DM LINE Penelope 1 273 -321 1 592 252 0 0 0 chr2R 1012956 1012984 -20133724 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 592 1343 176 24 103 chr2R 1013254 1013634 -20133074 - PROTOP_A DNA P 0 1105 756 1 592 36 53 0 0 chr2R 1013735 1013792 -20132916 + AT_rich Low_complexity Low_complexity 1 57 0 1 592 744 90 282 0 chr2R 1013827 1014004 -20132704 + S_DM DNA Tc1 1510 1736 0 1 592 360 173 0 10 chr2R 1014052 1014130 -20132578 - PROTOP_A DNA P -608 497 422 1 592 515 194 0 0 chr2R 1014127 1014225 -20132483 - PROTOP_A DNA P -956 149 52 1 592 2354 142 65 32 chr2R 1014253 1014988 -20131720 + DNAREP1_DM LINE Penelope 69 594 0 1 592 464 175 16 73 chr2R 1015300 1015423 -20131285 + DNAREP1_DM LINE Penelope 444 559 -35 1 592 21 0 0 0 chr2R 1015930 1015951 -20130757 + AT_rich Low_complexity Low_complexity 1 21 0 1 592 28 0 0 0 chr2R 1016326 1016354 -20130354 + AT_rich Low_complexity Low_complexity 1 28 0 1 592 238 224 45 0 chr2R 1016436 1016503 -20130205 - PROTOP DNA P -10 4470 4401 1 592 901 289 94 0 chr2R 1017107 1017415 -20129293 + DIVER2_I LTR Pao 659 995 -3152 1 592 25 0 0 0 chr2R 1017802 1017827 -20128881 + AT_rich Low_complexity Low_complexity 1 25 0 1 592 346 125 188 0 chr2R 1017883 1017947 -20128761 + DNAREP1_DM LINE Penelope 362 437 -157 1 592 2164 144 75 44 chr2R 1018009 1018745 -20127963 - DNAREP1_DM LINE Penelope 0 594 84 1 592 1740 108 84 7 chr2R 1018745 1019053 -20127655 - DNAREP1_DM LINE Penelope -262 332 1 1 592 294 305 150 26 chr2R 1019030 1019256 -20127452 - Jockey2 LINE Jockey -1536 1892 1639 1 592 583 292 159 7 chr2R 1019527 1019823 -20126885 - Jockey2 LINE Jockey -2359 1069 729 1 592 447 53 0 0 chr2R 1019920 1019977 -20126731 + PROTOP_B DNA P 1097 1153 0 1 592 485 113 0 0 chr2R 1019978 1020049 -20126659 + DMRT1A LINE R1 2991 3061 -2122 1 592 2703 125 24 5 chr2R 1020051 1020468 -20126240 + DMRT1A LINE R1 3456 3880 -1303 1 592 2554 134 5 15 chr2R 1020470 1020872 -20125836 + DMRT1A LINE R1 3982 4379 -804 1 592 1259 159 9 1 chr2R 1020900 1021113 -20125595 + DMRT1A LINE R1 4725 4942 -241 1 592 2211 82 0 7 chr2R 1021813 1022108 -20124600 + DMCR1A LINE CR1 3447 3739 -731 1 592 901 139 144 41 chr2R 1022108 1022303 -20124405 + DNAREP1_DM LINE Penelope 380 594 0 1 592 4473 77 161 1 chr2R 1022332 1022698 -20124010 + DMCR1A LINE CR1 3652 4032 -438 1 592 213 39 0 0 chr2R 1022698 1022724 -20123984 + (GAATG)n Simple_repeat Simple_repeat 2 27 0 1 592 4473 77 161 1 chr2R 1022724 1023063 -20123645 + DMCR1A LINE CR1 4033 4469 -1 1 592 1129 149 0 25 chr2R 1023094 1023294 -20123414 - DNAREP1_DM LINE Penelope -394 200 6 1 592 279 346 6 24 chr2R 1023301 1023467 -20123241 - NOMAD_I LTR Gypsy -1324 5248 5086 1 592 409 117 0 0 chr2R 1023611 1023667 -20123041 + DNAREP1_DM LINE Penelope 433 488 -106 1 592 2247 26 8 0 chr2R 1023667 1023931 -20122777 - Invader2_LTR LTR Gypsy 0 266 1 1 592 503 144 0 43 chr2R 1023931 1024021 -20122687 + DNAREP1_DM LINE Penelope 501 586 -8 1 592 633 157 0 23 chr2R 1024026 1024156 -20122552 + I_DM LINE I 2553 2679 -3552 1 592 587 162 427 0 chr2R 1024168 1024402 -20122306 + I_DM LINE I 2826 3159 -3072 1 592 1281 206 176 50 chr2R 1024402 1024863 -20121845 + I_DM LINE I 3362 3880 -2351 1 592 2269 216 107 30 chr2R 1024865 1025881 -20120827 + I_DM LINE I 3988 5132 -1099 1 592 29 0 0 0 chr2R 1025981 1026010 -20120698 + AT_rich Low_complexity Low_complexity 1 29 0 1 592 326 339 175 7 chr2R 1027049 1027352 -20119356 - Ulysses_I LTR Gypsy -826 5555 5202 1 592 23 0 0 0 chr2R 1028542 1028565 -20118143 + AT_rich Low_complexity Low_complexity 1 23 0 1 592 652 231 85 43 chr2R 1028838 1029145 -20117563 + DNAREP1_DM LINE Penelope 174 490 -104 1 592 2148 12 0 0 chr2R 1029164 1029404 -20117304 + PROTOP_A DNA P 1 240 -865 1 592 3609 55 59 6 chr2R 1029403 1029892 -20116816 - DOC3_DM LINE Jockey -1603 3137 2623 1 592 9364 10 18 0 chr2R 1029892 1030978 -20115730 + PROTOP_A DNA P 1 1105 0 1 592 1989 58 4 7 chr2R 1031028 1031307 -20115401 + TRANSIB4 DNA Transib 1 278 -2332 1 592 739 33 0 0 chr2R 1031307 1031399 -20115309 + TRANSIB4 DNA Transib 584 675 -1935 1 592 2084 90 22 0 chr2R 1031389 1031700 -20115008 + TRANSIB4 DNA Transib 879 1196 -1414 1 592 1821 63 5 6 chr2R 1031711 1032021 -20114687 + TRANSIB4 DNA Transib 2237 2610 0 1 592 25 51 0 0 chr2R 1032629 1032668 -20114040 + AT_rich Low_complexity Low_complexity 1 39 0 1 592 34 42 0 0 chr2R 1033027 1033075 -20113633 + AT_rich Low_complexity Low_complexity 1 48 0 1 592 22 35 0 0 chr2R 1033215 1033244 -20113464 + AT_rich Low_complexity Low_complexity 1 29 0 1 592 2749 117 138 0 chr2R 1033295 1033757 -20112951 - BS3_DM LINE Jockey -118 1672 1147 1 592 11104 56 12 0 chr2R 1033777 1035162 -20111546 - BS2 LINE Jockey 0 4721 3320 1 592 2195 122 3 3 chr2R 1035155 1035477 -20111231 - BS3_DM LINE Jockey -723 1067 746 1 592 356 135 0 0 chr2R 1035580 1035632 -20111076 - DNAREP1_DM LINE Penelope -535 59 8 1 592 23 33 0 0 chr2R 1035642 1035672 -20111036 + AT_rich Low_complexity Low_complexity 1 30 0 1 592 1618 73 59 21 chr2R 1037512 1037749 -20108959 - DNAREP1_DM LINE Penelope 0 594 349 1 592 233 254 0 0 chr2R 1038923 1038978 -20107730 + DNAREP1_DM LINE Penelope 431 485 -109 1 592 371 155 84 0 chr2R 1039022 1039093 -20107615 - DNAREP1_DM LINE Penelope -515 79 3 1 592 1787 49 0 0 chr2R 1039187 1039411 -20107297 - R1-2_DM LINE R1 0 3216 2993 1 592 387 43 0 0 chr2R 1039408 1039455 -20107253 - R1-2_DM LINE R1 -579 2637 2591 1 592 258 32 0 0 chr2R 1039454 1039485 -20107223 - DNAREP1_DM LINE Penelope -14 580 550 1 592 1490 134 4 0 chr2R 1039484 1039723 -20106985 + DMCR1A LINE CR1 2973 3212 -1258 1 592 695 167 201 0 chr2R 1039749 1039893 -20106815 + DMCR1A LINE CR1 3278 3450 -1020 1 592 441 143 140 21 chr2R 1039889 1039982 -20106726 + DMCR1A LINE CR1 3617 3720 -750 1 592 40 0 0 51 chr2R 1040145 1040204 -20106504 + AT_rich Low_complexity Low_complexity 1 56 0 1 592 1934 67 55 0 chr2R 1041621 1041876 -20104832 - DNAREP1_DM LINE Penelope 0 594 326 1 592 990 126 6 28 chr2R 1041871 1042050 -20104658 - DNAREP1_DM LINE Penelope -417 177 3 1 592 782 98 305 11 chr2R 1042829 1043013 -20103695 - DNAREP1_DM LINE Penelope -30 564 327 1 592 878 213 30 25 chr2R 1043010 1043246 -20103462 + MDG1_I LTR Gypsy 2964 3200 -3396 1 592 386 190 13 0 chr2R 1043264 1043343 -20103365 + MDG1_I LTR Gypsy 3696 3775 -2821 1 592 1995 217 105 16 chr2R 1043335 1043850 -20102858 + MDG1_I LTR Gypsy 4052 4612 -1984 1 592 767 221 96 11 chr2R 1043859 1044120 -20102588 + DM412 LTR Gypsy 5494 5776 -1121 1 592 21 0 0 0 chr2R 1044131 1044152 -20102556 + AT_rich Low_complexity Low_complexity 1 21 0 1 592 537 47 0 0 chr2R 1044182 1044246 -20102462 - G3_DM LINE Jockey -20 4585 4522 1 592 2880 48 22 0 chr2R 1044246 1044601 -20102107 + Gypsy10_LTR LTR Gypsy 1 363 -1 1 9 42029 5 25 0 chr2R 1044618 1049407 -20097301 + Gypsy10_I LTR Gypsy 40 4949 -329 1 593 462 108 0 98 chr2R 1049479 1049571 -20097137 + Gypsy10_I LTR Gypsy 5196 5278 0 1 593 1340 59 0 0 chr2R 1049571 1049739 -20096969 + Gypsy10_LTR LTR Gypsy 1 168 -196 1 593 1903 5 0 18 chr2R 1049739 1049958 -20096750 - ACCORD2_LTR LTR Gypsy 0 215 1 1 593 64672 0 0 0 chr2R 1049958 1057170 -20089538 - ACCORD2_I LTR Gypsy 0 7212 1 1 593 1862 5 0 0 chr2R 1057170 1057385 -20089323 - ACCORD2_LTR LTR Gypsy 0 215 1 1 593 1464 48 5 11 chr2R 1057385 1057559 -20089149 + Gypsy10_LTR LTR Gypsy 166 338 -26 1 593 1465 66 70 0 chr2R 1057587 1057814 -20088894 + G3_DM LINE Jockey 598 840 -3765 1 593 1543 91 182 0 chr2R 1057832 1058182 -20088526 + G3_DM LINE Jockey 934 1346 -3259 1 593 4110 39 99 1 chr2R 1058209 1058905 -20087803 + G3_DM LINE Jockey 1999 2762 -1843 1 593 792 50 175 0 chr2R 1058902 1059022 -20087686 + G3_DM LINE Jockey 3759 3899 -706 1 593 531 213 9 2 chr2R 1059026 1059188 -20087520 + Gypsy11_I LTR Gypsy 3224 3358 -166 1 593 209 80 65 26 chr2R 1059323 1059400 -20087308 + (TAA)n Simple_repeat Simple_repeat 1 80 0 1 593 43 20 0 0 chr2R 1059556 1059606 -20087102 + AT_rich Low_complexity Low_complexity 1 50 0 1 593 264 233 11 11 chr2R 1060079 1060166 -20086542 - Gypsy8_I LTR Gypsy -4257 90 4 1 593 557 240 172 32 chr2R 1060203 1060551 -20086157 - Gypsy8_I LTR Gypsy -379 3968 3572 1 593 34 0 0 0 chr2R 1060631 1060665 -20086043 + AT_rich Low_complexity Low_complexity 1 34 0 1 593 1118 192 87 56 chr2R 1061101 1061492 -20085216 + Gypsy12A_LTR LTR Gypsy 1759 2161 -119 1 593 941 156 62 0 chr2R 1061537 1061716 -20084992 - R1_DM LINE R1 -2522 2834 2645 1 593 1823 124 184 0 chr2R 1061718 1062072 -20084636 - R1_DM LINE R1 -3297 2059 1641 1 593 1143 143 60 13 chr2R 1062082 1062316 -20084392 - R1_DM LINE R1 -4254 1102 858 1 593 3723 131 96 8 chr2R 1062397 1063301 -20083407 + DMRT1B LINE R1 3196 4179 -1004 1 593 353 138 136 12 chr2R 1063293 1063374 -20083334 - MARINA DNA Mariner -964 303 213 1 593 2615 172 55 6 chr2R 1063562 1064087 -20082621 + MAX_I LTR Pao 4505 5055 -2859 1 593 457 125 150 0 chr2R 1064106 1064186 -20082522 + MAX_I LTR Pao 5953 6044 -1870 1 593 777 226 4 4 chr2R 1064209 1064432 -20082276 + MAX_I LTR Pao 6189 6442 -1472 1 593 677 149 16 0 chr2R 1064432 1064553 -20082155 + MAX_I LTR Pao 6619 6741 -1173 1 593 1498 168 126 13 chr2R 1064626 1065006 -20081702 + MAX_I LTR Pao 7134 7556 -358 1 593 341 108 138 0 chr2R 1065027 1065092 -20081616 - DNAREP1_DM LINE Penelope -3 591 518 1 593 660 255 5 23 chr2R 1065094 1065311 -20081397 - DNAREP1_DM LINE Penelope -345 249 37 1 593 463 186 100 8 chr2R 1066576 1066706 -20080002 - DMCR1A LINE CR1 -3942 528 387 1 593 558 166 141 11 chr2R 1066711 1066888 -20079820 - DMCR1A LINE CR1 -4000 470 271 1 593 282 51 0 0 chr2R 1067700 1067739 -20078969 + FB4_DM DNA Tc1 82 120 -3969 1 593 24 0 0 0 chr2R 1068017 1068041 -20078667 + AT_rich Low_complexity Low_complexity 1 24 0 1 593 21 36 0 0 chr2R 1069273 1069301 -20077407 + AT_rich Low_complexity Low_complexity 1 28 0 1 593 303 123 0 17 chr2R 1069488 1069546 -20077162 - DNAREP1_DM LINE Penelope 0 594 538 1 593 377 59 15 0 chr2R 1069537 1069605 -20077103 - Mariner2_DM DNA Tc1 -53 859 791 1 593 3953 98 47 52 chr2R 1069624 1070321 -20076387 - Mariner2_DM DNA Tc1 -217 695 2 1 593 827 128 0 0 chr2R 1070322 1070455 -20076253 - DNAREP1_DM LINE Penelope -108 486 354 1 593 21 36 0 0 chr2R 1070846 1070874 -20075834 + AT_rich Low_complexity Low_complexity 1 28 0 1 593 228 255 0 0 chr2R 1071158 1071240 -20075468 + (CATATA)n Simple_repeat Simple_repeat 1 82 0 1 593 217 51 51 0 chr2R 1072206 1072245 -20074463 + (TTA)n Simple_repeat Simple_repeat 3 43 0 1 593 1012 87 0 0 chr2R 1072496 1072646 -20074062 + DNAREP1_DM LINE Penelope 2 151 -443 1 593 1524 61 166 0 chr2R 1072732 1072961 -20073747 + DNAREP1_DM LINE Penelope 328 594 0 1 593 21 36 0 0 chr2R 1075129 1075157 -20071551 + AT_rich Low_complexity Low_complexity 1 28 0 1 593 469 179 0 10 chr2R 1075939 1076035 -20070673 + DNAREP1_DM LINE Penelope 1 95 -499 1 593 232 174 0 0 chr2R 1076550 1076596 -20070112 - Gypsy8_I LTR Gypsy -4299 48 3 1 593 338 194 176 128 chr2R 1076602 1076891 -20069817 - Gypsy8_LTR LTR Gypsy 0 304 2 1 593 1091 143 160 12 chr2R 1077675 1078122 -20068586 + DNAREP1_DM LINE Penelope 1 392 -202 1 593 1467 127 130 21 chr2R 1078219 1078586 -20068122 + DNAREP1_DM LINE Penelope 61 591 -3 1 593 758 233 100 0 chr2R 1078653 1078863 -20067845 + G2_DM LINE Jockey 1233 1463 -1639 1 593 243 221 147 0 chr2R 1078891 1078986 -20067722 + G_DM LINE Jockey 2808 2916 -1430 1 593 1015 221 29 4 chr2R 1079029 1079270 -20067438 + G_DM LINE Jockey 3129 3375 -971 1 593 453 240 32 0 chr2R 1079262 1079387 -20067321 + G_DM LINE Jockey 3506 3634 -712 1 593 1079 250 95 6 chr2R 1079398 1079736 -20066972 + G_DM LINE Jockey 3847 4214 -132 1 593 205 109 17 52 chr2R 1079764 1079822 -20066886 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1 593 33 43 0 0 chr2R 1080505 1080552 -20066156 + AT_rich Low_complexity Low_complexity 1 47 0 1 593 24 53 0 0 chr2R 1080670 1080708 -20066000 + AT_rich Low_complexity Low_complexity 1 38 0 1 593 27 29 0 0 chr2R 1081213 1081247 -20065461 + AT_rich Low_complexity Low_complexity 1 34 0 1 593 2176 134 63 31 chr2R 1081474 1081996 -20064712 - DNAREP1_DM LINE Penelope 0 594 86 1 593 574 133 10 0 chr2R 1082019 1082117 -20064591 - DNAREP1_DM LINE Penelope -486 108 10 1 593 923 171 184 26 chr2R 1082117 1082388 -20064320 + DNAREP1_DM LINE Penelope 281 594 0 1 593 21 36 0 0 chr2R 1083789 1083817 -20062891 + AT_rich Low_complexity Low_complexity 1 28 0 1 593 21 36 0 0 chr2R 1084345 1084373 -20062335 + AT_rich Low_complexity Low_complexity 1 28 0 1 593 1220 158 259 28 chr2R 1084424 1084826 -20061882 + DNAREP1_DM LINE Penelope 1 494 -100 1 593 26 0 0 0 chr2R 1085405 1085431 -20061277 + AT_rich Low_complexity Low_complexity 1 26 0 1 593 378 93 0 0 chr2R 1085714 1085768 -20060940 + DNAREP1_DM LINE Penelope 3 56 -538 1 593 861 108 64 7 chr2R 1085774 1085914 -20060794 + DNAREP1_DM LINE Penelope 398 545 -49 1 593 452 143 0 13 chr2R 1087469 1087547 -20059161 + DNAREP1_DM LINE Penelope 1 77 -517 1 593 748 188 59 55 chr2R 1087579 1087798 -20058910 + DMCR1A LINE CR1 4251 4470 0 1 593 435 170 243 7 chr2R 1088592 1088728 -20057980 - DNAREP1_DM LINE Penelope -235 359 192 1 593 264 227 145 13 chr2R 1088751 1088827 -20057881 - DNAREP1_DM LINE Penelope -508 86 1 1 593 373 69 52 0 chr2R 1089775 1089833 -20056875 + DNAREP1_DM LINE Penelope 2 62 -532 1 593 815 257 121 12 chr2R 1089916 1090247 -20056461 + FW_DM LINE Jockey 1103 1469 -3223 1 593 671 120 172 7 chr2R 1090296 1090447 -20056261 + DNAREP1_DM LINE Penelope 230 405 -189 1 593 815 257 121 12 chr2R 1090479 1090810 -20055898 + FW_DM LINE Jockey 1103 1469 -3223 1 593 1481 94 228 3 chr2R 1090859 1091157 -20055551 + DNAREP1_DM LINE Penelope 230 594 0 1 593 633 167 125 84 chr2R 1091915 1092235 -20054473 + DNAREP1_DM LINE Penelope 4 464 -130 1 593 412 185 287 0 chr2R 1093560 1093762 -20052946 + MARINA DNA Mariner 214 473 -794 1 593 580 247 7 0 chr2R 1093776 1093930 -20052778 + MARINA DNA Mariner 544 698 -569 1 593 380 203 40 0 chr2R 1093958 1094032 -20052676 + R1_DM LINE R1 794 870 -4486 1 593 2226 101 14 17 chr2R 1094032 1094384 -20052324 - DMRT1B LINE R1 0 5183 4833 1 593 1728 56 53 1 chr2R 1094451 1094706 -20052002 + DOC4_DM LINE Jockey 2 307 -4418 1 593 5505 51 165 12 chr2R 1094707 1095955 -20050753 + DOC4_DM LINE Jockey 438 1876 -915 1 593 1029 158 104 52 chr2R 1095967 1096280 -20050428 + Gypsy8_LTR LTR Gypsy 1 304 0 1 593 378 156 13 0 chr2R 1096254 1096331 -20050377 + Gypsy8_I LTR Gypsy 1 78 -4269 1 593 411 216 43 56 chr2R 1096428 1096590 -20050118 + Gypsy8_I LTR Gypsy 61 220 -4127 1 593 356 143 78 48 chr2R 1097664 1097767 -20048941 - DNAREP1_DM LINE Penelope -285 309 204 1 593 2344 103 100 2 chr2R 1098604 1099003 -20047705 + DNAREP1_DM LINE Penelope 156 593 -1 1 593 293 144 242 103 chr2R 1099217 1099411 -20047297 + PROTOP DNA P 402 622 -3858 1 593 401 153 405 0 chr2R 1099413 1099571 -20047137 - DNAREP1_DM LINE Penelope -22 572 351 1 593 641 124 116 0 chr2R 1099661 1099790 -20046918 - DNAREP1_DM LINE Penelope -450 144 1 1 593 22 56 0 0 chr2R 1099996 1100032 -20046676 + AT_rich Low_complexity Low_complexity 1 36 0 1 593 333 193 11 11 chr2R 1100397 1100486 -20046222 + DNAREP1_DM LINE Penelope 170 258 -336 1 593 1475 171 109 140 chr2R 1100570 1101183 -20045525 + DNAREP1_DM LINE Penelope 1 594 0 1 593 276 200 29 0 chr2R 1101181 1101251 -20045457 + DNAREP1_DM LINE Penelope 256 327 -267 1 593 27 29 0 0 chr2R 1101365 1101399 -20045309 + AT_rich Low_complexity Low_complexity 1 34 0 1 593 2078 42 100 0 chr2R 1102541 1102871 -20043837 + Baggins1 LINE LOA 1 363 -5090 1 593 1197 61 24 0 chr2R 1102871 1103035 -20043673 + Baggins1 LINE LOA 1703 1870 -3583 1 593 4851 46 86 2 chr2R 1103044 1104163 -20042545 + Baggins1 LINE LOA 4241 5453 0 1 593 764 122 118 26 chr2R 1104652 1104804 -20041904 + DNAREP1_DM LINE Penelope 429 594 0 1 593 23 68 0 0 chr2R 1104804 1104848 -20041860 + AT_rich Low_complexity Low_complexity 1 44 0 1 593 30 27 0 0 chr2R 1105059 1105096 -20041612 + AT_rich Low_complexity Low_complexity 1 37 0 1 593 2297 0 0 0 chr2R 1105257 1105533 -20041175 + Copia_LTR LTR Copia 1 276 0 1 593 39214 2 0 0 chr2R 1105533 1110126 -20036582 + Copia_I LTR Copia 1 4593 0 1 593 2297 0 0 0 chr2R 1110126 1110402 -20036306 + Copia_LTR LTR Copia 1 276 0 1 593 1316 176 157 29 chr2R 1110402 1110870 -20035838 + DNAREP1_DM LINE Penelope 7 534 -60 1 593 687 139 168 0 chr2R 1110951 1110974 -20035734 + DNAREP1_DM LINE Penelope 415 437 -157 1 593 180 111 0 0 chr2R 1110974 1111001 -20035707 + (CAGA)n Simple_repeat Simple_repeat 3 29 0 1 593 687 139 168 0 chr2R 1111001 1111114 -20035594 + DNAREP1_DM LINE Penelope 438 573 -21 1 593 284 328 0 15 chr2R 1111506 1111642 -20035066 - Invader3_I LTR Gypsy -2274 2614 2481 1 593 3571 70 122 1 chr2R 1111756 1112617 -20034091 + DMRT1A LINE R1 3274 4238 -945 1 593 919 112 112 130 chr2R 1112627 1112842 -20033866 + DMRT1A LINE R1 4833 5043 -140 1 593 345 299 8 8 chr2R 1112862 1112990 -20033718 - MDG3_I LTR Gypsy -2681 2305 2178 1 593 27 29 0 0 chr2R 1113838 1113872 -20032836 + AT_rich Low_complexity Low_complexity 1 34 0 1 593 243 314 12 19 chr2R 1113993 1114155 -20032553 - Invader2_I LTR Gypsy -153 4439 4301 1 593 1763 18 4 26 chr2R 1114162 1114388 -20032320 + ROOA_LTR LTR Pao 166 386 0 1 593 5462 47 28 27 chr2R 1114388 1115266 -20031442 + ROOA_I LTR Pao 1 794 -6055 1 593 2189 19 0 0 chr2R 1115287 1115547 -20031161 - Invader2_LTR LTR Gypsy 0 266 7 1 593 36891 12 7 3 chr2R 1115546 1120096 -20026612 - Invader2_I LTR Gypsy -24 4568 1 1 593 2205 26 0 0 chr2R 1120096 1120362 -20026346 - Invader2_LTR LTR Gypsy 0 266 1 1 593 361 59 39 0 chr2R 1120362 1120409 -20026299 + ROOA_I LTR Pao 801 849 -6000 1 593 12632 23 47 9 chr2R 1120408 1122038 -20024670 + ROOA_I LTR Pao 1026 2717 -4132 1 593 7470 39 48 3 chr2R 1122050 1123189 -20023519 + ROOA_I LTR Pao 3078 4268 -2581 1 593 7439 30 0 8 chr2R 1123186 1124113 -20022595 + ROOA_I LTR Pao 4427 5346 -1503 1 593 255 28 0 53 chr2R 1124207 1124245 -20022463 + ROOA_I LTR Pao 6799 6834 -15 1 593 2392 44 129 0 chr2R 1124251 1124591 -20022117 + ROOA_LTR LTR Pao 1 384 -2 1 593 23 0 0 0 chr2R 1124649 1124672 -20022036 + AT_rich Low_complexity Low_complexity 1 23 0 1 593 247 250 0 0 chr2R 1124822 1124890 -20021818 - Invader2_I LTR Gypsy -633 3959 3892 1 593 240 235 98 12 chr2R 1125024 1125106 -20021602 - MDG3_I LTR Gypsy -1271 3715 3627 1 593 4028 163 81 112 chr2R 1126181 1127655 -20019053 + M4DM DNA Transib 1 1429 -6 1 593 508 156 85 8 chr2R 1128095 1128224 -20018484 - DOC2_DM LINE Jockey -5 4788 4650 1 593 439 178 10 19 chr2R 1128215 1128318 -20018390 - DOC2_DM LINE Jockey -4686 107 6 1 593 379 187 226 8 chr2R 1129225 1129349 -20017359 + DNAREP1_DM LINE Penelope 434 584 -10 1 593 472 191 87 0 chr2R 1129628 1129743 -20016965 + DNAREP1_DM LINE Penelope 1 125 -469 1 593 593 86 0 61 chr2R 1129743 1129842 -20016866 - DNAREP1_DM LINE Penelope -501 93 1 1 593 318 254 26 26 chr2R 1130823 1130936 -20015772 - DIVER2_I LTR Pao -632 3515 3403 1 593 495 286 13 0 chr2R 1130948 1131102 -20015606 - DIVER2_I LTR Pao -832 3315 3160 1 593 227 191 0 0 chr2R 1131123 1131170 -20015538 - DIVER2_I LTR Pao -1067 3080 3034 1 593 1446 72 164 64 chr2R 1131200 1131498 -20015210 + DNAREP1_DM LINE Penelope 258 585 -9 1 593 614 215 26 19 chr2R 1131502 1131716 -20014992 - PROTOP DNA P -124 4356 4136 1 593 2373 165 216 11 chr2R 1132497 1133050 -20013658 - FW_DM LINE Jockey -1175 3517 2851 1 593 834 112 126 0 chr2R 1133050 1133193 -20013515 - DNAREP1_DM LINE Penelope 0 594 434 1 593 34 24 0 0 chr2R 1133754 1133795 -20012913 + AT_rich Low_complexity Low_complexity 1 41 0 1 593 348 181 12 0 chr2R 1134062 1134145 -20012563 + DNAREP1_DM LINE Penelope 122 205 -389 1 593 235 146 0 0 chr2R 1134202 1134243 -20012465 - DNAREP1_DM LINE Penelope -550 44 4 1 593 1661 123 92 0 chr2R 1134244 1134674 -20012034 - DNAREP1_DM LINE Penelope -1 593 1 1 593 1113 166 117 14 chr2R 1134673 1134954 -20011754 + DMCR1A LINE CR1 227 536 -3934 1 593 932 156 6 0 chr2R 1134952 1135119 -20011589 + DMCR1A LINE CR1 2050 2217 -2253 1 593 521 313 42 0 chr2R 1135374 1135588 -20011120 - DIVER2_I LTR Pao -2608 1539 1317 1 593 232 291 92 11 chr2R 1135821 1135908 -20010800 - DIVER2_I LTR Pao -3268 879 786 1 593 561 269 60 34 chr2R 1136078 1136313 -20010395 - BLASTOPIA_I LTR Gypsy -493 3988 3748 1 593 1533 293 85 8 chr2R 1136316 1137025 -20009683 - BLASTOPIA_I LTR Gypsy -1215 3266 2504 1 593 311 224 50 10 chr2R 1137621 1137720 -20008988 - DNAREP1_DM LINE Penelope -280 314 212 1 593 29 28 0 0 chr2R 1138017 1138053 -20008655 + AT_rich Low_complexity Low_complexity 1 36 0 1 593 21 0 0 0 chr2R 1138410 1138431 -20008277 + AT_rich Low_complexity Low_complexity 1 21 0 1 593 204 211 35 0 chr2R 1139667 1139724 -20006984 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 1 593 24 0 0 0 chr2R 1139781 1139805 -20006903 + AT_rich Low_complexity Low_complexity 1 24 0 1 593 272 267 0 0 chr2R 1143375 1143450 -20003258 - BATUMI_I LTR Pao -2352 5611 5537 1 593 612 103 103 0 chr2R 1145519 1145616 -20001092 + DNAREP1_DM LINE Penelope 368 474 -120 1 593 344 188 12 12 chr2R 1145722 1145803 -20000905 - Gypsy8_LTR LTR Gypsy -14 290 210 1 593 900 117 207 0 chr2R 1145800 1145988 -20000720 - DMCR1A LINE CR1 -2321 2149 1923 1 593 355 251 94 11 chr2R 1146104 1146472 -20000236 - TV1I LTR Gypsy -2805 3158 2595 1 593 839 180 63 55 chr2R 1146572 1146911 -19999797 - DNAREP1_DM LINE Penelope -105 489 45 1 593 241 214 0 18 chr2R 1147041 1147098 -19999610 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 593 23 0 0 0 chr2R 1147536 1147559 -19999149 + AT_rich Low_complexity Low_complexity 1 23 0 1 593 23 0 0 0 chr2R 1147583 1147606 -19999102 + AT_rich Low_complexity Low_complexity 1 23 0 1 593 1603 137 27 24 chr2R 1147673 1148046 -19998662 - S_DM DNA Tc1 -1298 438 65 1 593 235 32 0 0 chr2R 1148368 1148399 -19998309 - PROTOP_A DNA P -2 1103 1073 1 593 952 98 131 5 chr2R 1148400 1148606 -19998102 + TC1-2_DM DNA Tc1 1413 1644 0 1 593 8895 20 2 4 chr2R 1148635 1149742 -19996966 - PROTOP_A DNA P 0 1105 1 1 593 251 324 0 0 chr2R 1150284 1150389 -19996319 + DIVER2_I LTR Pao 2241 2345 -1802 1 593 780 108 8 0 chr2R 1150440 1150560 -19996148 + Gypsy12A_LTR LTR Gypsy 110 230 -2050 1 593 241 319 17 46 chr2R 1150576 1150750 -19995958 + Gypsy12A_LTR LTR Gypsy 325 493 -1843 1 593 4355 174 142 97 chr2R 1150722 1152439 -19994269 + Gypsy12A_LTR LTR Gypsy 413 2207 -73 1 593 524 88 25 0 chr2R 1152482 1152562 -19994146 + PROTOP_B DNA P 1014 1095 -58 1 593 242 301 0 0 chr2R 1152890 1152973 -19993735 + OSVALDO_I LTR Gypsy 3954 4036 -2617 1 593 221 102 102 0 chr2R 1153132 1153191 -19993517 + A-rich Low_complexity Low_complexity 5 69 0 1 593 1385 125 4 4 chr2R 1153191 1153432 -19993276 - DNAREP1_DM LINE Penelope -184 410 170 1 593 34 42 0 0 chr2R 1153452 1153500 -19993208 + AT_rich Low_complexity Low_complexity 1 48 0 1 593 26 30 0 0 chr2R 1154883 1154916 -19991792 + AT_rich Low_complexity Low_complexity 1 33 0 1 593 223 102 50 17 chr2R 1155566 1155626 -19991082 + (TTATA)n Simple_repeat Simple_repeat 1 62 0 1 593 22 0 0 0 chr2R 1155627 1155649 -19991059 + AT_rich Low_complexity Low_complexity 1 22 0 1 593 1686 34 0 0 chr2R 1155673 1155880 -19990828 - Gypsy6A_LTR LTR Gypsy -213 207 1 1 593 30 27 0 0 chr2R 1156012 1156049 -19990659 + AT_rich Low_complexity Low_complexity 1 37 0 1 593 22 0 0 0 chr2R 1157018 1157040 -19989668 + AT_rich Low_complexity Low_complexity 1 22 0 1 593 8746 41 52 1 chr2R 1157043 1158227 -19988481 - DMCR1A LINE CR1 -44 4426 3182 1 593 3765 48 122 2 chr2R 1158220 1158761 -19987947 - DMCR1A LINE CR1 -1487 2983 2378 1 593 250 280 68 8 chr2R 1161536 1161669 -19985039 - MINOS DNA Tc1 -45 1730 1590 1 593 1796 167 199 14 chr2R 1161684 1162477 -19984231 - MINOS DNA Tc1 -310 1465 527 1 593 21 0 0 0 chr2R 1162676 1162697 -19984011 + AT_rich Low_complexity Low_complexity 1 21 0 1 593 245 213 0 0 chr2R 1162775 1162836 -19983872 - MINOS DNA Tc1 -1290 485 425 1 593 764 158 162 20 chr2R 1162855 1163109 -19983599 + MINOS DNA Tc1 1340 1629 -146 1 593 293 158 179 26 chr2R 1163125 1163203 -19983505 - DNAREP1_DM LINE Penelope -53 541 452 1 593 378 133 13 13 chr2R 1163208 1163284 -19983424 - DNAREP1_DM LINE Penelope -278 316 241 1 593 5247 88 188 0 chr2R 1163285 1164622 -19982086 - R1-2_DM LINE R1 -1318 1898 311 1 593 2578 46 0 0 chr2R 1164699 1165026 -19981682 + G4_DM LINE Jockey 2851 3177 -679 1 593 29125 19 22 3 chr2R 1165024 1169801 -19976907 + G5_DM LINE Jockey 1 4856 0 1 593 1619 65 259 4 chr2R 1169825 1170103 -19976605 + G4_DM LINE Jockey 3222 3570 -286 1 593 3723 33 0 0 chr2R 1171189 1171649 -19975059 + DMCR1A LINE CR1 4011 4470 0 1 593 2859 29 85 30 chr2R 1172192 1172590 -19974118 - DOC4_DM LINE Jockey 0 2791 2372 1 593 1354 56 45 0 chr2R 1172587 1172765 -19973943 - DOC4_DM LINE Jockey -533 2258 2073 1 593 609 206 189 7 chr2R 1172769 1172991 -19973717 - DOC LINE Jockey -1278 3447 3220 1 593 307 0 0 0 chr2R 1173304 1173340 -19973368 - DOC4_DM LINE Jockey -1003 1788 1753 1 593 317 26 0 0 chr2R 1173361 1173399 -19973309 - DOC4_DM LINE Jockey -1415 1376 1339 1 593 2112 99 124 8 chr2R 1173425 1173811 -19972897 - DOC4_DM LINE Jockey -1519 1272 842 1 593 3152 44 32 30 chr2R 1178153 1178626 -19968082 - DOC4_DM LINE Jockey -1880 911 438 1 593 1757 50 52 1 chr2R 1178627 1178882 -19967826 - DOC4_DM LINE Jockey -4418 307 1 1 593 297 52 69 0 chr2R 1178889 1178947 -19967761 + G4_DM LINE Jockey 3795 3856 0 1 593 1285 136 275 49 chr2R 1178958 1179329 -19967379 - DNAREP1_DM LINE Penelope -86 508 54 1 594 40 21 0 0 chr2R 1180036 1180083 -19966625 + AT_rich Low_complexity Low_complexity 1 47 0 1 594 1107 145 227 6 chr2R 1180496 1180809 -19965899 + DNAREP1_DM LINE Penelope 209 590 -4 1 594 22 56 0 0 chr2R 1181344 1181380 -19965328 + AT_rich Low_complexity Low_complexity 1 36 0 1 594 23 0 0 0 chr2R 1183612 1183635 -19963073 + AT_rich Low_complexity Low_complexity 1 23 0 1 594 30 0 0 0 chr2R 1183677 1183707 -19963001 + AT_rich Low_complexity Low_complexity 1 30 0 1 594 567 125 94 28 chr2R 1183772 1183906 -19962802 - DNAREP1_DM LINE Penelope -32 562 452 1 594 1609 96 101 14 chr2R 1184352 1184638 -19962070 - DNAREP1_DM LINE Penelope -75 519 209 1 594 1496 78 37 4 chr2R 1184660 1184906 -19961802 - DNAREP1_DM LINE Penelope -310 284 31 1 594 7035 46 49 5 chr2R 1185106 1186381 -19960327 - G3_DM LINE Jockey 0 4605 3274 1 594 391 40 0 0 chr2R 1186964 1187014 -19959694 + DNAREP1_DM LINE Penelope 2 51 -543 1 594 901 175 79 0 chr2R 1187094 1187283 -19959425 + DNAREP1_DM LINE Penelope 390 593 -1 1 594 362 191 15 122 chr2R 1187900 1188031 -19958677 + DNAREP1_DM LINE Penelope 16 132 -462 1 594 573 177 273 10 chr2R 1188311 1188505 -19958203 + DNAREP1_DM LINE Penelope 245 489 -105 1 594 363 294 45 7 chr2R 1188827 1188981 -19957727 + Gypsy12_I LTR Gypsy 3152 3311 -2235 1 594 2211 21 18 0 chr2R 1189812 1190093 -19956615 + FB4_DM DNA Tc1 1 286 -3803 1 594 3796 38 50 0 chr2R 1190087 1190612 -19956096 - FB4_DM DNA Tc1 -3538 551 1 1 594 34 0 0 0 chr2R 1190723 1190757 -19955951 + AT_rich Low_complexity Low_complexity 1 34 0 1 594 1007 143 123 154 chr2R 1192038 1192727 -19953981 + DNAREP1_DM LINE Penelope 21 557 -37 1 594 1867 25 4 0 chr2R 1193737 1193977 -19952731 + TC1_DM DNA Tc1 1426 1666 0 1 594 1440 70 0 4 chr2R 1193983 1194211 -19952497 + S_DM DNA Tc1 1510 1736 0 1 594 1016 143 11 5 chr2R 1194223 1194413 -19952295 - DNAREP1_DM LINE Penelope -220 374 184 1 594 649 180 79 32 chr2R 1194474 1194663 -19952045 - DNAREP1_DM LINE Penelope -392 202 5 1 594 252 191 0 0 chr2R 1195604 1195651 -19951057 - DNAREP1_DM LINE Penelope -542 52 6 1 594 28 29 0 0 chr2R 1195660 1195695 -19951013 + AT_rich Low_complexity Low_complexity 1 35 0 1 594 254 102 82 0 chr2R 1196618 1196667 -19950041 - PROTOP_B DNA P 0 1153 1101 1 594 11303 28 1 10 chr2R 1196670 1198118 -19948590 - M4DM DNA Transib 0 1435 1 1 594 2352 37 71 128 chr2R 1198118 1198557 -19948151 + PROTOP_B DNA P 72 485 -668 1 594 3255 51 11 0 chr2R 1198552 1199002 -19947706 + PROTOP_B DNA P 634 1088 -65 1 594 873 170 133 7 chr2R 1199109 1199387 -19947321 + FB4_DM DNA Tc1 331 643 -3446 1 594 26 64 0 0 chr2R 1199792 1199839 -19946869 + AT_rich Low_complexity Low_complexity 1 47 0 1 594 3235 154 64 8 chr2R 1200647 1201276 -19945432 + DMRT1B LINE R1 487 1150 -4033 1 594 1762 140 14 0 chr2R 1201312 1201605 -19945103 + DMRT1B LINE R1 1955 2251 -2932 1 594 2272 148 64 2 chr2R 1201601 1202021 -19944687 + DMRT1B LINE R1 2460 2905 -2278 1 594 3552 157 22 2 chr2R 1202008 1202634 -19944074 + DMRT1B LINE R1 3101 3739 -1444 1 594 744 159 48 0 chr2R 1202634 1202779 -19943929 + DMRT1B LINE R1 5022 5173 -10 1 594 645 125 172 0 chr2R 1202778 1202906 -19943802 + DNAREP1_DM LINE Penelope 445 594 0 1 594 828 201 119 58 chr2R 1202928 1203223 -19943485 + I_DM LINE I 2559 2871 -3360 1 594 1402 143 139 7 chr2R 1203241 1203551 -19943157 + DNAREP1_DM LINE Penelope 1 351 -243 1 594 480 83 380 90 chr2R 1203566 1203703 -19943005 + DNAREP1_DM LINE Penelope 418 594 0 1 594 21 0 0 0 chr2R 1203751 1203772 -19942936 + AT_rich Low_complexity Low_complexity 1 21 0 1 594 1172 93 82 0 chr2R 1204357 1204540 -19942168 + DNAREP1_DM LINE Penelope 309 506 -88 1 594 433 218 176 28 chr2R 1204608 1204858 -19941850 - Gypsy3_LTR LTR Gypsy -111 287 1 1 594 681 271 36 0 chr2R 1204858 1205050 -19941658 - Gypsy3_I LTR Gypsy 0 6177 5979 1 594 3492 274 60 2 chr2R 1205153 1206296 -19940412 - Gypsy6_I LTR Gypsy -1921 5091 3882 1 594 525 193 70 0 chr2R 1206307 1206421 -19940287 - Gypsy3_I LTR Gypsy -3273 2904 2783 1 594 613 92 0 0 chr2R 1206437 1206524 -19940184 - Gypsy3_I LTR Gypsy -3532 2645 2559 1 594 508 127 0 0 chr2R 1206527 1206606 -19940102 - Gypsy3_I LTR Gypsy -5494 683 605 1 594 435 141 0 0 chr2R 1207374 1207459 -19939249 + DNAREP1_DM LINE Penelope 55 139 -455 1 594 468 147 147 0 chr2R 1208320 1208415 -19938293 - DNAREP1_DM LINE Penelope -31 563 455 1 594 1267 76 100 30 chr2R 1208415 1208645 -19938063 - DNAREP1_DM LINE Penelope -348 246 1 1 594 613 119 294 0 chr2R 1210125 1210268 -19936440 - DNAREP1_DM LINE Penelope -76 518 334 1 594 526 227 126 0 chr2R 1210280 1210478 -19936230 - DNAREP1_DM LINE Penelope -354 240 18 1 594 270 179 0 0 chr2R 1210967 1211023 -19935685 + NINJA_I LTR Pao 3055 3110 -2901 1 594 490 213 47 8 chr2R 1211132 1211260 -19935448 - Gypsy12A_LTR LTR Gypsy -211 2069 1937 1 594 389 118 226 0 chr2R 1211413 1211506 -19935202 - DNAREP1_DM LINE Penelope 0 594 481 1 594 375 115 62 25 chr2R 1211487 1211567 -19935141 - DNAREP1_DM LINE Penelope -336 258 176 1 594 1472 89 32 24 chr2R 1211581 1211833 -19934875 - DNAREP1_DM LINE Penelope -340 254 1 1 594 270 154 0 58 chr2R 1211830 1211899 -19934809 - DNAREP1_DM LINE Penelope -336 258 194 1 594 1432 64 69 0 chr2R 1211897 1212101 -19934607 + DNAREP1_DM LINE Penelope 373 590 -4 1 594 818 100 198 2 chr2R 1212148 1212318 -19934390 + DNAREP1_DM LINE Penelope 364 550 -44 1 594 232 250 0 0 chr2R 1212441 1212501 -19934207 + DNAREP1_DM LINE Penelope 363 422 -172 1 594 37 39 0 0 chr2R 1212617 1212668 -19934040 + AT_rich Low_complexity Low_complexity 1 51 0 1 594 25 51 0 0 chr2R 1215297 1215336 -19931372 + AT_rich Low_complexity Low_complexity 1 39 0 1 594 1100 179 167 35 chr2R 1215599 1215940 -19930768 - DNAREP1_DM LINE Penelope -2 592 207 1 594 1455 157 73 10 chr2R 1217144 1217447 -19929261 + Invader1_LTR LTR Gypsy 69 390 -33 1 594 1093 136 41 14 chr2R 1217448 1217782 -19928926 - DNAREP1_DM LINE Penelope -101 493 118 1 594 248 210 0 61 chr2R 1217800 1217866 -19928842 + DOC2_DM LINE Jockey 1559 1620 -3173 1 594 2649 39 69 0 chr2R 1217913 1218274 -19928434 - ROOA_LTR LTR Pao 0 386 1 1 594 2667 156 119 2 chr2R 1218659 1219181 -19927527 + DMRT1B LINE R1 1796 2378 -2805 1 594 4869 179 40 5 chr2R 1219234 1220183 -19926525 + DMRT1B LINE R1 2471 3452 -1731 1 594 11519 43 78 2 chr2R 1220221 1223064 -19923644 + DOC3_DM LINE Jockey 1060 4118 -622 1 594 1842 53 0 0 chr2R 1223077 1223305 -19923403 + DOC3_DM LINE Jockey 4513 4740 0 1 594 756 109 8 8 chr2R 1223307 1223427 -19923281 + DMRT1B LINE R1 152 271 -4912 1 594 3844 66 0 0 chr2R 1223425 1223909 -19922799 + DOC3_DM LINE Jockey 3635 4118 -622 1 594 1842 53 0 0 chr2R 1223922 1224150 -19922558 + DOC3_DM LINE Jockey 4513 4740 0 1 594 5124 146 24 7 chr2R 1224152 1225046 -19921662 + DMRT1B LINE R1 152 1060 -4123 1 594 1014 110 7 0 chr2R 1225051 1225206 -19921502 + DMRT1B LINE R1 1188 1343 -3840 1 594 747 103 28 0 chr2R 1225206 1225313 -19921395 + DMRT1B LINE R1 1611 1720 -3463 1 594 771 180 303 0 chr2R 1225340 1225551 -19921157 + DMRT1B LINE R1 4827 5101 -82 1 594 1659 116 313 19 chr2R 1225558 1226033 -19920675 + NINJA_I LTR Pao 5390 6002 -9 1 594 788 215 29 100 chr2R 1226041 1226351 -19920357 + NINJA_LTR LTR Pao 1 288 -29 1 594 21 0 0 0 chr2R 1228767 1228788 -19917920 + AT_rich Low_complexity Low_complexity 1 21 0 1 594 22 56 0 0 chr2R 1229232 1229268 -19917440 + AT_rich Low_complexity Low_complexity 1 36 0 1 594 21 57 0 0 chr2R 1229788 1229823 -19916885 + AT_rich Low_complexity Low_complexity 1 35 0 1 594 206 228 0 0 chr2R 1230535 1230592 -19916116 + (TAA)n Simple_repeat Simple_repeat 2 58 0 1 594 2403 164 24 34 chr2R 1230908 1231375 -19915333 - Gypsy8_I LTR Gypsy -1999 2348 1887 1 594 497 193 18 0 chr2R 1231373 1231482 -19915226 - Gypsy8_I LTR Gypsy -3194 1153 1043 1 594 865 326 25 14 chr2R 1231493 1231934 -19914774 - OSVALDO_I LTR Gypsy -3931 2722 2277 1 594 497 286 27 3 chr2R 1231959 1232226 -19914482 - OSVALDO_I LTR Gypsy -4564 2089 1879 1 594 27530 12 11 0 chr2R 1232695 1235777 -19910931 - DOC2_DM LINE Jockey 0 4793 1679 1 594 352 36 0 0 chr2R 1235785 1235841 -19910867 - DOC2_DM LINE Jockey -4550 243 188 1 594 481 36 0 0 chr2R 1235849 1235905 -19910803 - DOC2_DM LINE Jockey -4728 65 10 1 594 704 76 263 0 chr2R 1235988 1236106 -19910602 - DMCR1A LINE CR1 0 4470 4322 1 594 2824 60 21 8 chr2R 1236094 1236480 -19910228 + I_DM LINE I 92 482 -5749 1 594 9972 46 15 1 chr2R 1236479 1237689 -19909019 + S_DM DNA Tc1 508 1734 -2 1 594 216 98 58 19 chr2R 1237689 1237741 -19908967 + (TATAG)n Simple_repeat Simple_repeat 4 57 0 1 594 261 109 0 0 chr2R 1238068 1238114 -19908594 + (TTA)n Simple_repeat Simple_repeat 3 48 0 1 594 1961 167 99 83 chr2R 1239817 1240373 -19906335 - DNAREP1_DM LINE Penelope -4 590 26 1 594 1824 176 91 0 chr2R 1240408 1240772 -19905936 - MAX_I LTR Pao -2282 5632 5236 1 594 25 0 0 0 chr2R 1240884 1240909 -19905799 + AT_rich Low_complexity Low_complexity 1 25 0 1 594 1282 168 181 0 chr2R 1240950 1241254 -19905454 + FB4_DM DNA Tc1 3731 4089 0 1 594 1371 147 125 28 chr2R 1244280 1244708 -19902000 - DNAREP1_DM LINE Penelope -183 411 72 1 594 370 327 45 29 chr2R 1245052 1245361 -19901347 + Gypsy12_I LTR Gypsy 1373 1686 -3860 1 594 304 263 113 35 chr2R 1245542 1245684 -19901024 + Gypsy12_I LTR Gypsy 2006 2158 -3388 1 594 1756 136 92 36 chr2R 1246449 1247035 -19899673 + DNAREP1_DM LINE Penelope 89 497 -97 1 594 23 68 0 0 chr2R 1247130 1247174 -19899534 + AT_rich Low_complexity Low_complexity 1 44 0 1 594 294 155 0 17 chr2R 1247315 1247374 -19899334 - DNAREP1_DM LINE Penelope -345 249 192 1 594 23 0 0 0 chr2R 1247791 1247814 -19898894 + AT_rich Low_complexity Low_complexity 1 23 0 1 594 21 57 0 0 chr2R 1247892 1247927 -19898781 + AT_rich Low_complexity Low_complexity 1 35 0 1 594 33 0 0 0 chr2R 1250410 1250443 -19896265 + AT_rich Low_complexity Low_complexity 1 33 0 1 594 249 238 175 0 chr2R 1251207 1251287 -19895421 - FW2_DM LINE Jockey -2656 1305 1212 1 594 239 71 0 0 chr2R 1251368 1251410 -19895298 + DNAREP1_DM LINE Penelope 220 261 -333 1 594 1203 78 123 0 chr2R 1251418 1251597 -19895111 + DNAREP1_DM LINE Penelope 394 594 0 1 594 358 335 55 26 chr2R 1252650 1252996 -19893712 - Ulysses_I LTR Gypsy -2992 3389 3034 1 594 291 313 23 108 chr2R 1253628 1253886 -19892822 + ACCORD2_I LTR Gypsy 526 761 -6451 1 594 1216 78 517 27 chr2R 1254552 1254815 -19891893 - DNAREP1_DM LINE Penelope -38 556 165 1 594 628 141 0 0 chr2R 1254838 1254937 -19891771 + DNAREP1_DM LINE Penelope 1 99 -495 1 594 1813 50 8 29 chr2R 1254992 1255238 -19891470 - BATUMI_LTR LTR Pao 0 272 32 1 594 4976 65 0 5 chr2R 1255260 1255924 -19890784 - BATUMI_I LTR Pao 0 7963 7303 1 594 2051 42 123 10 chr2R 1255947 1256239 -19890469 + BATUMI_I LTR Pao 6427 6751 -1212 1 594 26247 38 11 60 chr2R 1256232 1259886 -19886822 - BATUMI_I LTR Pao -4489 3474 1 1 594 1768 68 14 42 chr2R 1259889 1260174 -19886534 - BATUMI_I LTR Pao 0 272 32 1 594 396 167 13 0 chr2R 1260356 1260434 -19886274 - Gypsy8_I LTR Gypsy -4268 79 1 1 594 694 140 10 44 chr2R 1260408 1260570 -19886138 - Gypsy8_LTR LTR Gypsy 0 304 85 1 594 302 234 26 51 chr2R 1261693 1261810 -19884898 - Gypsy8_LTR LTR Gypsy -190 114 1 1 594 312 172 0 9 chr2R 1261903 1262019 -19884689 + (AATAG)n Simple_repeat Simple_repeat 1 114 0 1 594 4813 134 135 7 chr2R 1262311 1263967 -19882741 - FW_DM LINE Jockey -1 4691 2782 1 594 1803 124 292 0 chr2R 1263939 1264306 -19882402 - FW_DM LINE Jockey -2117 2575 2102 1 594 2283 152 94 1 chr2R 1264300 1264971 -19881737 - FW_DM LINE Jockey -2703 1989 1257 1 594 1924 194 89 42 chr2R 1264971 1265489 -19881219 + Gypsy12_LTR LTR Gypsy 1 542 -1794 1 594 285 210 48 179 chr2R 1265518 1265686 -19881022 + Gypsy12_LTR LTR Gypsy 639 895 -1441 1 594 2443 188 148 75 chr2R 1265702 1265967 -19880741 + Gypsy12_LTR LTR Gypsy 1332 1627 -709 1 594 201 39 0 0 chr2R 1265967 1265993 -19880715 + (TAA)n Simple_repeat Simple_repeat 3 28 0 1 594 2443 188 148 75 chr2R 1265993 1266503 -19880205 + Gypsy12_LTR LTR Gypsy 1628 2164 -172 1 594 3882 2 0 0 chr2R 1266503 1266927 -19879781 - Stalker2_LTR LTR Gypsy 0 424 1 1 594 4675 18 0 27 chr2R 1266927 1267561 -19879147 - Stalker2_I LTR Gypsy 0 7402 6786 1 594 4777 2 0 0 chr2R 1267561 1268079 -19878629 + NOMAD_LTR LTR Gypsy 1 518 0 1 594 61438 0 1 1 chr2R 1268079 1274651 -19872057 + NOMAD_I LTR Gypsy 1 6572 0 1 594 4777 2 0 0 chr2R 1274651 1275169 -19871539 + NOMAD_LTR LTR Gypsy 1 518 0 1 594 41090 3 4 1 chr2R 1275171 1281362 -19865346 - Stalker2_I LTR Gypsy -1279 6123 1 1 594 3757 5 0 0 chr2R 1281362 1281786 -19864922 - Stalker2_LTR LTR Gypsy 0 424 1 1 594 1030 142 0 33 chr2R 1281786 1281968 -19864740 + Gypsy12_LTR LTR Gypsy 2161 2336 0 1 594 2617 154 134 0 chr2R 1281968 1282454 -19864254 - FW_DM LINE Jockey -3432 1260 710 1 594 43 47 0 0 chr2R 1282722 1282786 -19863922 + AT_rich Low_complexity Low_complexity 1 64 0 1 594 49 0 0 0 chr2R 1284596 1284645 -19862063 + AT_rich Low_complexity Low_complexity 1 49 0 1 594 25 51 0 0 chr2R 1284804 1284843 -19861865 + AT_rich Low_complexity Low_complexity 1 39 0 1 594 22 56 0 0 chr2R 1284928 1284964 -19861744 + AT_rich Low_complexity Low_complexity 1 36 0 1 594 348 290 8 8 chr2R 1285073 1285205 -19861503 + BURDOCK_I LTR Gypsy 866 997 -4863 1 594 47 19 0 0 chr2R 1287583 1287637 -19859071 + AT_rich Low_complexity Low_complexity 1 54 0 1 594 235 250 0 88 chr2R 1288885 1288999 -19857709 - Gypsy5_I LTR Gypsy -874 5635 5532 1 594 7052 74 40 78 chr2R 1289226 1290425 -19856283 + PROTOP_B DNA P 1 1153 0 1 594 310 272 38 50 chr2R 1290505 1290664 -19856044 - TIRANT_I LTR Gypsy -5458 1051 895 1 594 337 278 59 19 chr2R 1290654 1290808 -19855900 - TIRANT_I LTR Gypsy -5830 1862 1767 1 594 297 155 0 0 chr2R 1291253 1291311 -19855397 + (AATAG)n Simple_repeat Simple_repeat 4 61 0 1 594 321 206 0 0 chr2R 1291360 1291457 -19855251 + (AATAG)n Simple_repeat Simple_repeat 4 100 0 1 594 763 71 133 0 chr2R 1291594 1291707 -19855001 - DNAREP1_DM LINE Penelope -466 128 1 1 594 568 168 161 0 chr2R 1291732 1291887 -19854821 - DM297_I LTR Gypsy -4318 1849 1670 1 594 914 190 44 5 chr2R 1292018 1292224 -19854484 - DM297_I LTR Gypsy -4675 1492 1279 1 594 20588 37 102 2 chr2R 1292221 1295573 -19851135 + Baggins1 LINE LOA 364 4086 -1367 1 594 7674 32 36 0 chr2R 1295567 1296504 -19850204 + Baggins1 LINE LOA 4483 5453 0 1 594 361 6 230 0 chr2R 1297008 1297633 -19849075 + (ATATG)n Simple_repeat Simple_repeat 1 769 0 1 594 13771 35 7 0 chr2R 1298580 1300234 -19846474 - TC1_DM DNA Tc1 0 1666 1 1 594 26 50 0 0 chr2R 1302273 1302313 -19844395 + AT_rich Low_complexity Low_complexity 1 40 0 1 594 25 0 0 0 chr2R 1303556 1303581 -19843127 + AT_rich Low_complexity Low_complexity 1 25 0 1 594 211 259 0 17 chr2R 1304425 1304484 -19842224 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 594 246 79 0 73 chr2R 1304710 1304751 -19841957 + PROTOP_A DNA P 509 546 -559 1 594 34 24 0 0 chr2R 1305024 1305065 -19841643 + AT_rich Low_complexity Low_complexity 1 41 0 1 594 2451 0 0 4 chr2R 1305553 1305829 -19840879 - BURDOCK_LTR LTR Gypsy 0 275 1 1 594 10852 0 1 2 chr2R 1305830 1307041 -19839667 - BURDOCK_I LTR Gypsy 0 5860 4651 1 594 7066 12 0 0 chr2R 1307040 1307852 -19838856 - BURDOCK_I LTR Gypsy -5048 812 1 1 594 2451 0 0 4 chr2R 1307852 1308128 -19838580 - BURDOCK_LTR LTR Gypsy 0 275 1 1 594 1866 98 18 9 chr2R 1308635 1308963 -19837745 + S_DM DNA Tc1 1 331 -1405 1 595 1450 116 167 21 chr2R 1310774 1311195 -19835513 + DNAREP1_DM LINE Penelope 1 594 0 1 595 25 31 0 0 chr2R 1311218 1311250 -19835458 + AT_rich Low_complexity Low_complexity 1 32 0 1 595 3155 109 51 26 chr2R 1311826 1312354 -19834354 - DNAREP1_DM LINE Penelope -34 560 20 1 595 339 98 0 0 chr2R 1312451 1312502 -19834206 + FW_DM LINE Jockey 4097 4147 -545 1 595 247 200 27 41 chr2R 1312685 1312758 -19833950 + Transib-N1_DM DNA Transib 1 72 -442 1 595 6139 101 57 23 chr2R 1312915 1313984 -19832724 - PROTOP_A DNA P 0 1105 1 1 595 260 98 0 0 chr2R 1314421 1314462 -19832246 - PROTOP_A DNA P -842 263 223 1 595 482 345 21 4 chr2R 1314510 1314743 -19831965 - DIVER2_I LTR Pao -2005 2142 1906 1 595 1836 44 0 4 chr2R 1315375 1315603 -19831105 - DMCR1A LINE CR1 0 4470 4244 1 595 7602 29 138 4 chr2R 1315598 1316567 -19830141 - DMCR1A LINE CR1 -459 4011 2913 1 595 17614 30 44 5 chr2R 1316558 1318957 -19827751 - DMCR1A LINE CR1 -1977 2493 1 1 595 942 272 68 13 chr2R 1319172 1319481 -19827227 - DIVER2_I LTR Pao -3178 969 644 1 595 3486 171 96 38 chr2R 1319831 1320626 -19826082 - FW_DM LINE Jockey -811 3881 3041 1 595 1189 182 63 8 chr2R 1320677 1320922 -19825786 - FW_DM LINE Jockey -1831 2861 2603 1 595 1702 175 180 59 chr2R 1320922 1321451 -19825257 - DNAREP1_DM LINE Penelope 0 594 2 1 595 379 233 182 23 chr2R 1322227 1322447 -19824261 + FB4_DM DNA Tc1 107 361 -3728 1 595 27 49 0 0 chr2R 1322475 1322516 -19824192 + AT_rich Low_complexity Low_complexity 1 41 0 1 595 1322 129 269 24 chr2R 1322553 1322879 -19823829 - DNAREP1_DM LINE Penelope 0 594 189 1 595 493 251 43 5 chr2R 1322859 1323043 -19823665 - DNAREP1_DM LINE Penelope -296 298 108 1 595 28 29 0 0 chr2R 1323082 1323117 -19823591 + AT_rich Low_complexity Low_complexity 1 35 0 1 595 22 0 0 0 chr2R 1323127 1323149 -19823559 + AT_rich Low_complexity Low_complexity 1 22 0 1 595 946 218 106 129 chr2R 1324666 1325109 -19821599 + DNAREP1_DM LINE Penelope 2 434 -160 1 595 331 253 28 28 chr2R 1325864 1325977 -19820731 + FW2_DM LINE Jockey 3105 3203 -758 1 595 2364 119 123 108 chr2R 1326140 1326724 -19819984 - DNAREP1_DM LINE Penelope 0 594 2 1 595 301 191 0 233 chr2R 1328992 1329108 -19817600 + DNAREP1_DM LINE Penelope 381 469 -125 1 595 631 220 55 27 chr2R 1329084 1329304 -19817404 + DNAREP1_DM LINE Penelope 94 319 -275 1 595 791 160 204 41 chr2R 1329888 1330109 -19816599 - PROTOP DNA P -4055 425 169 1 595 3396 150 73 2 chr2R 1330107 1330726 -19815982 + DMRT1B LINE R1 488 1150 -4033 1 595 1863 153 15 12 chr2R 1330731 1331055 -19815653 + DMRT1B LINE R1 1927 2251 -2932 1 595 2452 146 64 2 chr2R 1331051 1331471 -19815237 + DMRT1B LINE R1 2460 2905 -2278 1 595 2905 156 8 7 chr2R 1331458 1332042 -19814666 + DMRT1B LINE R1 3101 3739 -1444 1 595 728 108 57 16 chr2R 1332042 1332164 -19814544 + DMRT1B LINE R1 5022 5148 -35 1 595 505 86 0 0 chr2R 1332203 1332273 -19814435 + DNAREP1_DM LINE Penelope 525 594 0 1 595 944 200 114 57 chr2R 1332310 1332591 -19814117 + I_DM LINE I 2574 2870 -3361 1 595 1786 75 240 20 chr2R 1332614 1333101 -19813607 + DNAREP1_DM LINE Penelope 1 594 0 1 595 591 158 41 7 chr2R 1333107 1333254 -19813454 + I_DM LINE I 2938 3089 -3142 1 595 1310 209 118 48 chr2R 1333281 1333723 -19812985 + I_DM LINE I 3226 3698 -2533 1 595 270 200 0 62 chr2R 1333726 1333790 -19812918 + I_DM LINE I 3943 4002 -2229 1 595 189 0 0 0 chr2R 1334598 1334619 -19812089 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 595 21 0 0 0 chr2R 1334639 1334660 -19812048 + AT_rich Low_complexity Low_complexity 1 21 0 1 595 33 90 0 0 chr2R 1335084 1335173 -19811535 + AT_rich Low_complexity Low_complexity 1 89 0 1 595 21 82 0 0 chr2R 1335438 1335487 -19811221 + AT_rich Low_complexity Low_complexity 1 49 0 1 595 21 57 0 0 chr2R 1335807 1335842 -19810866 + AT_rich Low_complexity Low_complexity 1 35 0 1 595 1396 252 58 0 chr2R 1335882 1336311 -19810397 - FW_DM LINE Jockey -117 4575 4122 1 595 1730 289 41 7 chr2R 1336292 1336972 -19809736 - FW_DM LINE Jockey -700 3992 3290 1 595 6169 43 54 15 chr2R 1337642 1338493 -19808215 - Baggins1 LINE LOA 0 5453 4570 1 595 30 59 0 0 chr2R 1338928 1338979 -19807729 + AT_rich Low_complexity Low_complexity 1 51 0 1 595 407 179 0 0 chr2R 1339060 1339138 -19807570 - DMCR1A LINE CR1 -2516 1954 1877 1 595 969 207 74 19 chr2R 1339131 1339402 -19807306 - DMCR1A LINE CR1 -2746 1724 1439 1 595 24 0 0 0 chr2R 1340541 1340565 -19806143 + AT_rich Low_complexity Low_complexity 1 24 0 1 595 462 51 0 0 chr2R 1340575 1340634 -19806074 - DNAREP1_DM LINE Penelope -534 60 2 1 595 26 64 0 0 chr2R 1341669 1341716 -19804992 + AT_rich Low_complexity Low_complexity 1 47 0 1 595 31 26 0 0 chr2R 1341886 1341924 -19804784 + AT_rich Low_complexity Low_complexity 1 38 0 1 595 617 154 7 26 chr2R 1343681 1343864 -19802844 + DNAREP1_DM LINE Penelope 89 328 -266 1 595 810 145 90 12 chr2R 1343915 1344082 -19802626 + DNAREP1_DM LINE Penelope 380 559 -35 1 595 458 201 136 7 chr2R 1344190 1344345 -19802363 + LINEJ1_DM LINE Jockey 1368 1542 -3478 1 595 337 169 0 0 chr2R 1344383 1344442 -19802266 + LINEJ1_DM LINE Jockey 1604 1662 -3358 1 595 682 214 28 28 chr2R 1344446 1344624 -19802084 + LINEJ1_DM LINE Jockey 2302 2479 -2541 1 595 24 0 0 0 chr2R 1344641 1344665 -19802043 + AT_rich Low_complexity Low_complexity 1 24 0 1 595 233 70 47 0 chr2R 1344665 1344708 -19802000 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 1 595 619 164 43 0 chr2R 1345016 1345132 -19801576 + LINEJ1_DM LINE Jockey 2472 2592 -2428 1 595 1483 195 107 19 chr2R 1345148 1345675 -19801033 + LINEJ1_DM LINE Jockey 2806 3488 -1532 1 595 276 253 53 0 chr2R 1345674 1345769 -19800939 + LINEJ1_DM LINE Jockey 3639 3738 -1282 1 595 32 0 0 0 chr2R 1345978 1346010 -19800698 + AT_rich Low_complexity Low_complexity 1 32 0 1 595 1181 286 8 0 chr2R 1346282 1346652 -19800056 - BEL_I LTR Pao -632 4772 4400 1 595 899 229 155 0 chr2R 1346786 1347083 -19799625 - BEL_I LTR Pao -1405 3999 3657 1 595 1013 235 24 4 chr2R 1347102 1347354 -19799354 - BEL_I LTR Pao -2739 2665 2409 1 595 257 241 0 0 chr2R 1347430 1347488 -19799220 - BEL_I LTR Pao -3682 1722 1665 1 595 767 258 43 0 chr2R 1347550 1347759 -19798949 - BEL_I LTR Pao -4094 1310 1093 1 595 499 239 8 0 chr2R 1347771 1347888 -19798820 - BEL_I LTR Pao -4358 1046 929 1 595 3397 79 207 3 chr2R 1348952 1349558 -19797150 - TRANSIB4 DNA Transib 0 2610 1881 1 595 1519 69 175 4 chr2R 1349620 1349894 -19796814 - TRANSIB4 DNA Transib -954 1656 1336 1 595 3094 53 27 0 chr2R 1349892 1350343 -19796365 - TRANSIB4 DNA Transib -2107 503 41 1 595 409 354 36 11 chr2R 1351180 1351460 -19795248 + Gypsy12_I LTR Gypsy 1660 1946 -3600 1 595 400 306 38 0 chr2R 1351545 1351702 -19795006 + Gypsy12_I LTR Gypsy 3440 3602 -1944 1 595 335 244 252 5 chr2R 1351737 1351939 -19794769 - MAX_I LTR Pao -313 7601 7350 1 595 2048 173 146 18 chr2R 1351982 1352476 -19794232 - MAX_I LTR Pao -959 6955 6399 1 595 936 239 101 0 chr2R 1352487 1352763 -19793945 - MAX_I LTR Pao -2171 5743 5440 1 595 2922 141 91 0 chr2R 1352788 1353306 -19793402 - MAX_I LTR Pao -3266 4648 4084 1 595 277 268 0 12 chr2R 1353344 1353427 -19793281 - DMRT1C LINE R1 -393 5050 4969 1 595 328 358 0 0 chr2R 1353577 1353728 -19792980 - DMRT1C LINE R1 -1397 4046 3896 1 595 635 72 41 0 chr2R 1354206 1354303 -19792405 - DNAREP1_DM LINE Penelope -189 405 305 1 595 27 0 0 0 chr2R 1355963 1355990 -19790718 + AT_rich Low_complexity Low_complexity 1 27 0 1 595 339 133 17 0 chr2R 1356383 1356443 -19790265 - DNAREP1_DM LINE Penelope 0 594 534 1 595 471 123 0 0 chr2R 1356498 1356579 -19790129 - DNAREP1_DM LINE Penelope -345 249 169 1 595 5017 33 158 2 chr2R 1356642 1357758 -19788950 + TRANSIB3 DNA Transib 1 1291 -1592 1 595 2845 58 23 41 chr2R 1357767 1358202 -19788506 + TRANSIB3 DNA Transib 2455 2881 -2 1 595 307 214 8 57 chr2R 1358305 1358429 -19788279 + R1_DM LINE R1 542 734 -4622 1 595 1472 230 0 0 chr2R 1358794 1359142 -19787566 + R1_DM LINE R1 2243 2590 -2766 1 595 368 320 7 7 chr2R 1359153 1359307 -19787401 + R1_DM LINE R1 2677 2830 -2526 1 595 330 323 48 6 chr2R 1360207 1360375 -19786333 + NOMAD_I LTR Gypsy 3934 4108 -2464 1 595 361 222 0 14 chr2R 1360713 1360786 -19785922 + DIVER2_I LTR Pao 4072 4143 -4 1 595 2448 70 61 3 chr2R 1361316 1361691 -19785017 + DNAREP1_DM LINE Penelope 198 594 0 1 595 475 253 94 6 chr2R 1361767 1361926 -19784782 - DMCR1A LINE CR1 -1344 3126 2954 1 595 277 250 80 40 chr2R 1361936 1362061 -19784647 - DMCR1A LINE CR1 -1748 2722 2593 1 595 21 36 0 0 chr2R 1362837 1362865 -19783843 + AT_rich Low_complexity Low_complexity 1 28 0 1 595 297 362 14 10 chr2R 1363372 1363581 -19783127 - Jockey2 LINE Jockey -303 3125 2916 1 595 1646 78 113 46 chr2R 1366144 1366426 -19780282 - DNAREP1_DM LINE Penelope 0 594 294 1 595 560 305 306 4 chr2R 1366434 1367096 -19779612 - FW_DM LINE Jockey -570 4122 3348 1 595 322 297 0 9 chr2R 1367177 1367319 -19779389 - FW_DM LINE Jockey -1630 3062 2964 1 595 231 287 56 0 chr2R 1367568 1367676 -19779032 - FW3_DM LINE Jockey -2052 1080 967 1 595 763 242 169 6 chr2R 1367664 1367984 -19778724 - FW_DM LINE Jockey -3255 1437 1066 1 595 4612 39 82 33 chr2R 1368148 1368810 -19777898 - G5A_DM LINE Jockey -415 2426 1733 1 595 364 152 131 75 chr2R 1368812 1368919 -19777789 - DMRT1C LINE R1 0 5443 5331 1 595 2102 20 0 0 chr2R 1368917 1369169 -19777539 - G5A_DM LINE Jockey -1094 1747 1496 1 595 7673 62 12 11 chr2R 1369167 1370213 -19776495 - G5A_DM LINE Jockey -1592 1249 202 1 595 2450 244 5 3 chr2R 1370216 1370830 -19775878 - G5_DM LINE Jockey -3463 1393 779 1 595 305 283 9 0 chr2R 1370823 1370929 -19775779 - G5_DM LINE Jockey -4228 628 522 1 595 21 0 0 0 chr2R 1371040 1371061 -19775647 + AT_rich Low_complexity Low_complexity 1 21 0 1 595 271 228 0 0 chr2R 1371177 1371234 -19775474 - DNAREP1_DM LINE Penelope -534 60 4 1 595 25 51 0 0 chr2R 1371556 1371595 -19775113 + AT_rich Low_complexity Low_complexity 1 39 0 1 595 26 30 0 0 chr2R 1372159 1372192 -19774516 + AT_rich Low_complexity Low_complexity 1 33 0 1 595 22 56 0 0 chr2R 1372326 1372362 -19774346 + AT_rich Low_complexity Low_complexity 1 36 0 1 595 417 127 38 38 chr2R 1373157 1373263 -19773445 - DNAREP1_DM LINE Penelope -296 298 193 1 595 259 102 20 0 chr2R 1373257 1373306 -19773402 - DNAREP1_DM LINE Penelope -291 303 254 1 595 21 0 0 0 chr2R 1373479 1373500 -19773208 + AT_rich Low_complexity Low_complexity 1 21 0 1 595 7140 64 83 6 chr2R 1373704 1374802 -19771906 + TRANSIB2 DNA Transib 1 1182 -1662 1 595 2919 131 142 3 chr2R 1375562 1376220 -19770488 + DMRT1A LINE R1 1887 2676 -2507 1 595 779 147 7 0 chr2R 1376221 1376357 -19770351 + DMRT1A LINE R1 2932 3068 -2115 1 595 2549 141 223 9 chr2R 1376353 1377478 -19769230 + DMRT1A LINE R1 3685 5050 -133 1 595 2071 114 134 85 chr2R 1377815 1378321 -19768387 - DNAREP1_DM LINE Penelope -63 531 1 1 595 463 161 0 0 chr2R 1378720 1378801 -19767907 + DNAREP1_DM LINE Penelope 514 594 0 1 595 258 54 27 0 chr2R 1379762 1379799 -19766909 + DNAREP1_DM LINE Penelope 553 590 -4 1 595 285 245 138 21 chr2R 1379813 1380001 -19766707 + DNAREP1_DM LINE Penelope 32 241 -353 1 595 1630 148 47 82 chr2R 1380001 1380405 -19766303 + DNAREP1_DM LINE Penelope 205 594 0 1 595 38 68 0 0 chr2R 1383599 1383672 -19763036 + AT_rich Low_complexity Low_complexity 1 73 0 1 595 245 300 82 37 chr2R 1384479 1384614 -19762094 - PENELOPE LINE Penelope -82 4079 3939 1 595 21 0 0 0 chr2R 1384739 1384760 -19761948 + AT_rich Low_complexity Low_complexity 1 21 0 1 595 517 45 0 0 chr2R 1385314 1385381 -19761327 - DNAREP1_DM LINE Penelope 0 594 528 1 595 1902 155 35 0 chr2R 1385400 1385767 -19760941 - DNAREP1_DM LINE Penelope -125 469 90 1 595 1098 83 12 0 chr2R 1385779 1385947 -19760761 - DNAREP1_DM LINE Penelope -423 171 2 1 595 212 143 0 23 chr2R 1386080 1386123 -19760585 + (CATA)n Simple_repeat Simple_repeat 3 44 0 1 595 22 70 0 0 chr2R 1386937 1386980 -19759728 + AT_rich Low_complexity Low_complexity 1 43 0 1 595 2219 178 86 11 chr2R 1387763 1388627 -19758081 - MICROPIA_I LTR Gypsy -1631 2845 1917 1 595 525 148 0 0 chr2R 1388666 1388747 -19757961 - MICROPIA_I LTR Gypsy -2892 1584 1504 1 595 671 194 29 0 chr2R 1388754 1388893 -19757815 - MICROPIA_I LTR Gypsy -4093 383 241 1 595 7926 33 72 1 chr2R 1388915 1389297 -19757411 + TC1-2_DM DNA Tc1 1 398 -1246 1 595 207 0 0 0 chr2R 1389297 1389320 -19757388 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 1 595 7926 41 49 4 chr2R 1389320 1390411 -19756297 + TC1-2_DM DNA Tc1 399 1644 0 1 595 537 191 9 9 chr2R 1390411 1390527 -19756181 - MICROPIA_I LTR Gypsy -4343 133 18 1 595 260 300 94 53 chr2R 1390633 1390932 -19755776 - MICROPIA_LTR LTR Gypsy -80 396 86 1 595 27 0 0 0 chr2R 1391175 1391202 -19755506 + AT_rich Low_complexity Low_complexity 1 27 0 1 595 966 178 25 25 chr2R 1391238 1391475 -19755233 + DNAREP1_DM LINE Penelope 3 239 -355 1 595 850 187 143 0 chr2R 1391460 1391669 -19755039 + DNAREP1_DM LINE Penelope 137 375 -219 1 595 53 17 0 0 chr2R 1391694 1391754 -19754954 + AT_rich Low_complexity Low_complexity 1 60 0 1 595 365 82 0 0 chr2R 1391908 1391957 -19754751 - DNAREP1_DM LINE Penelope -536 58 10 1 595 331 278 0 0 chr2R 1392013 1392103 -19754605 + DNAREP1_DM LINE Penelope 19 108 -486 1 595 499 175 71 0 chr2R 1393149 1393275 -19753433 - DNAREP1_DM LINE Penelope -331 263 129 1 595 23 33 0 0 chr2R 1393534 1393564 -19753144 + AT_rich Low_complexity Low_complexity 1 30 0 1 595 844 117 73 0 chr2R 1394605 1394742 -19751966 + DNAREP1_DM LINE Penelope 445 591 -3 1 595 28 0 0 0 chr2R 1395077 1395105 -19751603 + AT_rich Low_complexity Low_complexity 1 28 0 1 595 22 35 0 0 chr2R 1395247 1395276 -19751432 + AT_rich Low_complexity Low_complexity 1 29 0 1 595 33 56 0 0 chr2R 1395600 1395654 -19751054 + AT_rich Low_complexity Low_complexity 1 54 0 1 595 21 0 0 0 chr2R 1395980 1396001 -19750707 + AT_rich Low_complexity Low_complexity 1 21 0 1 595 1058 84 419 0 chr2R 1396099 1396326 -19750382 - DNAREP1_DM LINE Penelope 0 594 273 1 595 310 293 138 57 chr2R 1396576 1396735 -19749973 - R1_DM LINE R1 -16 5340 5169 1 595 372 188 175 0 chr2R 1396928 1397008 -19749700 - DNAREP1_DM LINE Penelope -70 524 431 1 595 1489 143 162 30 chr2R 1397908 1398497 -19748211 + DNAREP1_DM LINE Penelope 3 439 -155 1 595 3107 132 114 13 chr2R 1398497 1399118 -19747590 + FB4_DM DNA Tc1 1143 1826 -2263 1 595 1767 306 132 16 chr2R 1399177 1400319 -19746389 - IVK_DM LINE I -1060 4342 3068 1 595 393 338 53 9 chr2R 1400493 1400720 -19745988 - IVK_DM LINE I -3157 2245 2009 1 595 252 348 0 0 chr2R 1400928 1401046 -19745662 - IVK_DM LINE I -3647 1755 1638 1 595 227 226 216 0 chr2R 1401230 1401332 -19745376 - IVK_DM LINE I -4345 1057 934 1 595 299 136 0 0 chr2R 1401448 1401492 -19745216 - IVK_DM LINE I -5358 44 1 1 595 2411 138 100 10 chr2R 1401487 1402293 -19744415 + FB4_DM DNA Tc1 1882 2760 -1329 1 595 317 89 0 0 chr2R 1402289 1402334 -19744374 + DNAREP1_DM LINE Penelope 501 545 -49 1 595 32 0 0 0 chr2R 1403371 1403403 -19743305 + AT_rich Low_complexity Low_complexity 1 32 0 1 595 416 193 80 0 chr2R 1403938 1404026 -19742682 + DMRT1C LINE R1 4650 4744 -699 1 595 229 255 0 0 chr2R 1404019 1404066 -19742642 + DMRT1C LINE R1 4909 4955 -488 1 595 752 144 15 29 chr2R 1404069 1404205 -19742503 + PROTOP_B DNA P 2 135 -1018 1 595 332 167 0 0 chr2R 1404236 1404296 -19742412 + PROTOP_B DNA P 222 281 -872 1 595 282 161 338 44 chr2R 1404311 1404445 -19742263 + PROTOP_B DNA P 458 631 -522 1 595 913 80 240 0 chr2R 1404445 1404595 -19742113 - DNAREP1_DM LINE Penelope 0 594 409 1 595 27 73 0 0 chr2R 1405270 1405325 -19741383 + AT_rich Low_complexity Low_complexity 1 55 0 1 595 638 120 0 0 chr2R 1405558 1405650 -19741058 + DNAREP1_DM LINE Penelope 503 594 0 1 595 472 201 52 54 chr2R 1405953 1406138 -19740570 - DNAREP1_DM LINE Penelope -244 350 44 1 595 318 206 0 0 chr2R 1406160 1406223 -19740485 - DNAREP1_DM LINE Penelope -529 65 3 1 595 27 0 0 0 chr2R 1406226 1406253 -19740455 + AT_rich Low_complexity Low_complexity 1 27 0 1 595 833 199 118 35 chr2R 1407555 1407784 -19738924 - DNAREP1_DM LINE Penelope -142 452 205 1 595 26 0 0 0 chr2R 1407787 1407813 -19738895 + AT_rich Low_complexity Low_complexity 1 26 0 1 595 333 203 27 0 chr2R 1407813 1407887 -19738821 - DNAREP1_DM LINE Penelope -502 92 17 1 595 1017 105 79 11 chr2R 1407884 1408131 -19738577 + DNAREP1_DM LINE Penelope 86 311 -283 1 595 233 178 22 0 chr2R 1408630 1408675 -19738033 - DNAREP1_DM LINE Penelope -46 548 503 1 595 2132 66 3 0 chr2R 1408667 1408953 -19737755 + FB4_DM DNA Tc1 1102 1388 -2701 1 595 1147 71 0 0 chr2R 1408951 1409119 -19737589 + FB4_DM DNA Tc1 2593 2760 -1329 1 595 328 188 72 152 chr2R 1409111 1409249 -19737459 - DNAREP1_DM LINE Penelope -104 490 364 1 595 1063 156 218 14 chr2R 1409322 1409826 -19736882 - DMCR1A LINE CR1 -116 4354 3748 1 595 3475 134 142 3 chr2R 1409824 1411188 -19735520 - DMCR1A LINE CR1 -1156 3314 1760 1 595 26 50 0 0 chr2R 1411236 1411276 -19735432 + AT_rich Low_complexity Low_complexity 1 40 0 1 595 1541 152 127 11 chr2R 1411724 1412079 -19734629 + DNAREP1_DM LINE Penelope 199 594 0 1 595 725 150 0 0 chr2R 1412734 1412854 -19733854 + DNAREP1_DM LINE Penelope 1 120 -474 1 595 434 146 133 11 chr2R 1412851 1412941 -19733767 - DNAREP1_DM LINE Penelope -342 252 152 1 595 747 173 239 20 chr2R 1412977 1413178 -19733530 + DNAREP1_DM LINE Penelope 331 575 -19 1 595 24 53 0 0 chr2R 1413214 1413252 -19733456 + AT_rich Low_complexity Low_complexity 1 38 0 1 595 556 207 341 21 chr2R 1413316 1413596 -19733112 - DNAREP1_DM LINE Penelope -36 558 189 1 595 21 89 0 0 chr2R 1413600 1413656 -19733052 + AT_rich Low_complexity Low_complexity 1 56 0 1 595 205 128 51 0 chr2R 1415337 1415376 -19731332 + (TATATG)n Simple_repeat Simple_repeat 1 41 0 1 595 312 221 10 10 chr2R 1415449 1415545 -19731163 + DNAREP1_DM LINE Penelope 220 315 -279 1 595 2317 134 85 114 chr2R 1415557 1416154 -19730554 + DNAREP1_DM LINE Penelope 1 580 -14 1 595 247 35 0 0 chr2R 1416827 1416856 -19729852 - DNAREP1_DM LINE Penelope -562 32 4 1 595 306 221 9 19 chr2R 1417001 1417107 -19729601 - DMCR1A LINE CR1 -4321 149 45 1 595 1764 110 107 22 chr2R 1417101 1417464 -19729244 + TC1-2_DM DNA Tc1 1251 1644 0 1 595 4526 147 70 66 chr2R 1417537 1418668 -19728040 - PROTOP_B DNA P -18 1135 1 1 595 345 148 33 0 chr2R 1418947 1419008 -19727700 - DMCR1A LINE CR1 -775 3695 3633 1 595 5603 65 110 15 chr2R 1419897 1420985 -19725723 + DOC4_DM LINE Jockey 1 1272 -1519 1 595 3198 48 222 2 chr2R 1421011 1421452 -19725256 + DOC4_DM LINE Jockey 1339 1876 -915 1 595 1422 152 19 80 chr2R 1421464 1421815 -19724893 + Gypsy8_LTR LTR Gypsy 1 302 -2 1 595 235 73 98 0 chr2R 1421790 1421831 -19724877 + Gypsy8_I LTR Gypsy 1 45 -4302 1 595 524 207 0 60 chr2R 1421935 1422084 -19724624 + Gypsy8_I LTR Gypsy 90 229 -4118 1 595 749 204 195 8 chr2R 1422734 1422982 -19723726 + DOC LINE Jockey 3220 3513 -1227 1 595 1425 56 45 0 chr2R 1422991 1423169 -19723539 + DOC4_DM LINE Jockey 2073 2258 -533 1 595 2955 114 93 30 chr2R 1423166 1423750 -19722958 + DOC4_DM LINE Jockey 2372 2791 0 1 595 5460 50 24 1 chr2R 1425204 1425923 -19720785 - G4_DM LINE Jockey 0 3856 3122 1 595 43 35 0 0 chr2R 1426005 1426062 -19720646 + AT_rich Low_complexity Low_complexity 1 57 0 1 595 23 33 0 0 chr2R 1426599 1426629 -19720079 + AT_rich Low_complexity Low_complexity 1 30 0 1 595 227 256 89 13 chr2R 1427287 1427366 -19719342 - DIVER2_I LTR Pao -799 3348 3264 1 595 619 63 0 0 chr2R 1428332 1428411 -19718297 - DNAREP1_DM LINE Penelope -1 593 515 1 595 701 105 9 0 chr2R 1428405 1428510 -19718198 - DNAREP1_DM LINE Penelope -488 106 1 1 595 21 36 0 0 chr2R 1429766 1429794 -19716914 + AT_rich Low_complexity Low_complexity 1 28 0 1 595 253 272 36 24 chr2R 1430618 1430701 -19716007 - Gypsy6_LTR LTR Gypsy -268 139 56 1 595 3800 7 2 0 chr2R 1430749 1431171 -19715537 + Invader1_LTR LTR Gypsy 1 423 0 1 595 28696 8 1 0 chr2R 1431171 1434355 -19712353 + Invader1_I LTR Gypsy 1 3186 0 1 595 3773 7 5 0 chr2R 1434355 1434776 -19711932 + Invader1_LTR LTR Gypsy 1 423 0 1 595 25 31 0 0 chr2R 1437591 1437623 -19709085 + AT_rich Low_complexity Low_complexity 1 32 0 1 595 180 0 0 0 chr2R 1437638 1437658 -19709050 + (T)n Simple_repeat Simple_repeat 1 20 0 1 595 11624 46 46 3 chr2R 1438467 1439955 -19706753 + Copia2_I LTR Copia 2611 4162 0 1 595 1119 108 0 0 chr2R 1439968 1440126 -19706582 + Copia2_LTR_DM LTR Copia 41 198 0 1 74 13481 94 63 44 chr2R 1440126 1442420 -19704288 - DMCR1A LINE CR1 -1256 3214 876 1 596 2131 60 68 43 chr2R 1442420 1442771 -19703937 - DMCR1A LINE CR1 -4105 365 6 1 596 784 189 38 43 chr2R 1443736 1443946 -19702762 - DNAREP1_DM LINE Penelope -362 232 24 1 596 1367 168 129 28 chr2R 1444325 1444742 -19701966 - Gypsy12A_LTR LTR Gypsy -1 2335 1786 1 596 6627 52 126 0 chr2R 1444833 1445740 -19700968 - BS3_DM LINE Jockey 0 1790 770 1 596 833 209 30 80 chr2R 1445770 1446072 -19700636 - Gypsy12A_LTR LTR Gypsy -1169 1111 825 1 596 12213 42 103 11 chr2R 1446084 1447680 -19699028 - Baggins1 LINE LOA -5 5448 3705 1 596 1201 33 118 0 chr2R 1447692 1447844 -19698864 - Baggins1 LINE LOA -1802 3651 3482 1 596 411 200 11 0 chr2R 1447831 1447921 -19698787 - DNAREP1_DM LINE Penelope -480 114 24 1 596 1367 168 129 28 chr2R 1448300 1448717 -19697991 - Gypsy12A_LTR LTR Gypsy -1 2335 1786 1 596 6627 52 126 0 chr2R 1448808 1449715 -19696993 - BS3_DM LINE Jockey 0 1790 770 1 596 833 209 30 80 chr2R 1449745 1450047 -19696661 - Gypsy12A_LTR LTR Gypsy -1169 1111 825 1 596 12213 42 103 11 chr2R 1450059 1451655 -19695053 - Baggins1 LINE LOA -5 5448 3705 1 596 1201 33 118 0 chr2R 1451667 1451819 -19694889 - Baggins1 LINE LOA -1802 3651 3482 1 596 411 200 11 0 chr2R 1451806 1451896 -19694812 - DNAREP1_DM LINE Penelope -480 114 24 1 596 1367 168 129 28 chr2R 1452275 1452692 -19694016 - Gypsy12A_LTR LTR Gypsy -1 2335 1786 1 596 6627 52 126 0 chr2R 1452783 1453690 -19693018 - BS3_DM LINE Jockey 0 1790 770 1 596 833 209 30 80 chr2R 1453720 1454022 -19692686 - Gypsy12A_LTR LTR Gypsy -1169 1111 825 1 596 10350 42 98 10 chr2R 1454034 1456529 -19690179 - Baggins1 LINE LOA -5 5448 2733 1 596 7885 30 36 0 chr2R 1456913 1457850 -19688858 - Baggins1 LINE LOA 0 5453 4483 1 596 7894 34 124 6 chr2R 1457844 1459055 -19687653 - Baggins1 LINE LOA -1367 4086 2733 1 596 9487 44 89 5 chr2R 1459439 1461949 -19684759 - Baggins1 LINE LOA 0 5453 2733 1 596 7885 30 36 0 chr2R 1462333 1463270 -19683438 - Baggins1 LINE LOA 0 5453 4483 1 596 12638 33 100 1 chr2R 1463264 1465323 -19681385 - Baggins1 LINE LOA -1367 4086 1823 1 596 795 87 0 0 chr2R 1465323 1465427 -19681281 - Baggins1 LINE LOA -4258 1195 1092 1 596 2433 48 0 0 chr2R 1465426 1465716 -19680992 - Baggins1 LINE LOA -4889 564 275 1 596 592 42 0 0 chr2R 1465714 1465786 -19680922 - Baggins1 LINE LOA -5380 73 2 1 596 2381 174 74 95 chr2R 1465789 1466476 -19680232 - Gypsy12A_LTR LTR Gypsy -1447 833 161 1 596 784 189 38 43 chr2R 1467368 1467578 -19679130 - DNAREP1_DM LINE Penelope -362 232 24 1 596 260 0 0 0 chr2R 1467957 1467988 -19678720 - Gypsy12A_LTR LTR Gypsy -1 2279 2249 1 596 225 152 65 0 chr2R 1468054 1468100 -19678608 - Gypsy12A_LTR LTR Gypsy -199 2081 2033 1 596 23 0 0 0 chr2R 1468924 1468947 -19677761 + AT_rich Low_complexity Low_complexity 1 23 0 1 596 7146 47 86 2 chr2R 1469710 1470864 -19675844 + DMCR1A LINE CR1 2 1253 -3217 1 596 1604 41 0 25 chr2R 1470865 1471066 -19675642 + DMCR1A LINE CR1 1431 1626 -2844 1 596 3738 0 0 0 chr2R 1471066 1471464 -19675244 + Gypsy3_LTR LTR Gypsy 1 398 0 1 596 57811 2 1 1 chr2R 1471464 1477644 -19669064 + Gypsy3_I LTR Gypsy 1 6177 0 1 596 2839 19 102 60 chr2R 1477644 1478026 -19668682 + Gypsy3_LTR LTR Gypsy 1 398 0 1 596 58109 1 0 0 chr2R 1478026 1484203 -19662505 + Gypsy3_I LTR Gypsy 1 6177 0 1 596 2713 28 105 63 chr2R 1484203 1484585 -19662123 + Gypsy3_LTR LTR Gypsy 1 398 0 1 596 805 73 9 0 chr2R 1484585 1484695 -19662013 + DMCR1A LINE CR1 1623 1733 -2737 1 596 368 80 0 0 chr2R 1484707 1484757 -19661951 - DMCR1A LINE CR1 0 4470 4421 1 596 7789 30 16 0 chr2R 1484751 1485653 -19661055 - DMCR1A LINE CR1 -707 3763 2848 1 596 963 66 0 0 chr2R 1485657 1485779 -19660929 - ACCORD2_I LTR Gypsy -4659 2553 2432 1 596 1662 106 32 56 chr2R 1485777 1486117 -19660591 - ACCORD2_I LTR Gypsy -5045 2167 1836 1 596 1974 94 132 60 chr2R 1486087 1486551 -19660157 - ACCORD2_I LTR Gypsy -5184 2028 1532 1 596 4983 92 68 36 chr2R 1486617 1487647 -19659061 - ACCORD2_I LTR Gypsy -6057 1155 1 1 596 730 184 63 99 chr2R 1487647 1487870 -19658838 - ACCORD2_LTR LTR Gypsy 0 215 1 1 596 239 163 0 0 chr2R 1488030 1488073 -19658635 - DNAREP1_DM LINE Penelope -155 4006 3964 1 596 432 196 10 10 chr2R 1488065 1488163 -19658545 - DNAREP1_DM LINE Penelope -329 265 168 1 596 882 189 35 39 chr2R 1488159 1488390 -19658318 - DNAREP1_DM LINE Penelope -341 253 24 1 596 1433 132 243 3 chr2R 1488758 1489110 -19657598 - Gypsy12A_LTR LTR Gypsy -1 2335 1813 1 596 921 147 360 0 chr2R 1489167 1489380 -19657328 - DNAREP1_DM LINE Penelope 0 594 305 1 596 23 54 0 0 chr2R 1490073 1490110 -19656598 + AT_rich Low_complexity Low_complexity 1 37 0 1 596 23 33 0 0 chr2R 1491315 1491345 -19655363 + AT_rich Low_complexity Low_complexity 1 30 0 1 596 24 0 0 0 chr2R 1491920 1491944 -19654764 + AT_rich Low_complexity Low_complexity 1 24 0 1 596 21 57 0 0 chr2R 1492556 1492591 -19654117 + AT_rich Low_complexity Low_complexity 1 35 0 1 596 298 180 0 0 chr2R 1492764 1492825 -19653883 + DNAREP1_DM LINE Penelope 534 594 0 1 596 260 79 26 0 chr2R 1494711 1494749 -19651959 - DNAREP1_DM LINE Penelope 0 594 556 1 596 21 71 0 0 chr2R 1494993 1495035 -19651673 + AT_rich Low_complexity Low_complexity 1 42 0 1 596 33 0 0 0 chr2R 1495968 1496001 -19650707 + AT_rich Low_complexity Low_complexity 1 33 0 1 596 231 267 33 0 chr2R 1497029 1497146 -19649562 + (TA)n Simple_repeat Simple_repeat 1 120 0 1 596 301 258 256 6 chr2R 1497301 1497469 -19649239 + DNAREP1_DM LINE Penelope 384 593 -1 1 596 958 88 15 0 chr2R 1497930 1498067 -19648641 + DNAREP1_DM LINE Penelope 1 139 -455 1 596 852 71 18 0 chr2R 1498073 1498186 -19648522 + DNAREP1_DM LINE Penelope 480 594 0 1 596 622 224 43 12 chr2R 1500042 1500205 -19646503 - DMCR1A LINE CR1 -911 3559 3392 1 596 2574 152 206 19 chr2R 1500239 1501126 -19645582 - DMCR1A LINE CR1 -1236 3234 2181 1 596 1665 164 134 123 chr2R 1501142 1501711 -19644997 - DMCR1A LINE CR1 -2422 2048 1474 1 596 600 132 130 15 chr2R 1501714 1501845 -19644863 - DMCR1A LINE CR1 -3424 1046 901 1 596 518 194 0 0 chr2R 1501848 1501956 -19644752 - DMCR1A LINE CR1 -2889 1581 1474 1 596 1087 146 52 0 chr2R 1501959 1502171 -19644537 - DMCR1A LINE CR1 -3424 1046 824 1 596 3668 166 85 52 chr2R 1502299 1503192 -19643516 + BS2 LINE Jockey 14 936 -3785 1 596 281 226 10 41 chr2R 1503201 1503298 -19643410 + BS2 LINE Jockey 2595 2688 -2033 1 596 907 59 0 0 chr2R 1503279 1503398 -19643310 + BS3_DM LINE Jockey 591 709 -1081 1 596 3943 58 22 0 chr2R 1503416 1503949 -19642759 + BS3_DM LINE Jockey 1246 1790 0 1 596 25 31 0 0 chr2R 1504141 1504173 -19642535 + AT_rich Low_complexity Low_complexity 1 32 0 1 596 2313 80 37 37 chr2R 1505058 1505465 -19641243 - Gypsy6A_LTR LTR Gypsy 0 420 1 1 596 1957 113 113 28 chr2R 1505475 1505865 -19640843 - Invader1_LTR LTR Gypsy 0 423 1 1 596 2053 126 110 9 chr2R 1505865 1506291 -19640417 - Invader1_I LTR Gypsy 0 3186 2718 1 596 21 71 0 0 chr2R 1506461 1506503 -19640205 + AT_rich Low_complexity Low_complexity 1 42 0 1 596 678 312 28 36 chr2R 1506648 1507146 -19639562 - MICROPIA_I LTR Gypsy -496 3980 3487 1 596 1699 305 22 66 chr2R 1507141 1508212 -19638496 - MICROPIA_I LTR Gypsy -2167 2309 1286 1 596 213 122 61 0 chr2R 1508318 1508367 -19638341 + (TAA)n Simple_repeat Simple_repeat 2 53 0 1 596 248 306 55 55 chr2R 1508887 1509015 -19637693 - DIVER2_I LTR Pao -491 3656 3529 1 596 28 0 0 0 chr2R 1509597 1509625 -19637083 + AT_rich Low_complexity Low_complexity 1 28 0 1 596 2564 3 0 3 chr2R 1509625 1509924 -19636784 - Invader3_LTR LTR Gypsy 0 298 1 1 596 41885 1 9 0 chr2R 1509924 1510035 -19636673 - Invader3_I LTR Gypsy 0 4888 4778 1 596 218 32 32 0 chr2R 1510035 1510066 -19636642 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 596 41885 1 9 0 chr2R 1510066 1514800 -19631908 - Invader3_I LTR Gypsy -111 4777 2 1 596 2564 3 0 3 chr2R 1514800 1515099 -19631609 - Invader3_LTR LTR Gypsy 0 298 1 1 596 2015 56 15 0 chr2R 1515249 1515517 -19631191 + DMRT1A LINE R1 2793 3064 -2119 1 596 8705 57 17 27 chr2R 1515518 1516748 -19629960 + DMRT1A LINE R1 3959 5176 -7 1 596 5619 38 7 8 chr2R 1516741 1517456 -19629252 + DMCR1A LINE CR1 427 1140 -3330 1 596 3191 23 0 0 chr2R 1517456 1517840 -19628868 + DIVER2_LTR LTR Pao 1 384 -1 1 596 12113 100 48 35 chr2R 1517842 1520014 -19626694 + DMCR1A LINE CR1 1276 3477 -993 1 596 3266 61 18 0 chr2R 1520012 1520469 -19626239 + DMCR1A LINE CR1 4006 4470 0 1 596 1075 81 0 12 chr2R 1520562 1520724 -19625984 + DNAREP1_DM LINE Penelope 1 160 -434 1 596 466 93 11 11 chr2R 1520735 1520822 -19625886 + DNAREP1_DM LINE Penelope 214 300 -294 1 596 425 186 204 98 chr2R 1520950 1521225 -19625483 + Gypsy8_LTR LTR Gypsy 1 304 0 1 596 825 177 196 33 chr2R 1521689 1521934 -19624774 + Gypsy12_I LTR Gypsy 1177 1461 -4085 1 596 1292 192 75 0 chr2R 1521931 1522196 -19624512 + Gypsy12_I LTR Gypsy 1570 1854 -3692 1 596 6740 193 138 9 chr2R 1522198 1523813 -19622895 + Gypsy12_I LTR Gypsy 2136 3957 -1589 1 596 4922 80 93 25 chr2R 1524053 1525141 -19621567 + PROTOP DNA P 1 1105 0 1 596 333 288 125 28 chr2R 1525525 1526068 -19620640 - G2_DM LINE Jockey -1037 2065 1798 1 596 2331 127 75 5 chr2R 1526121 1526549 -19620159 - Gypsy12A_LTR LTR Gypsy -30 2250 1793 1 596 552 138 232 26 chr2R 1526649 1526843 -19619865 - Gypsy12A_LTR LTR Gypsy -665 1615 1382 1 596 1711 107 0 36 chr2R 1526827 1527108 -19619600 - Gypsy12A_LTR LTR Gypsy -2009 271 1 1 596 289 65 22 0 chr2R 1531785 1531831 -19614877 + DNAREP1_DM LINE Penelope 191 237 -357 1 596 255 165 165 0 chr2R 1531857 1531936 -19614772 + DNAREP1_DM LINE Penelope 193 284 -310 1 596 274 122 0 0 chr2R 1532005 1532046 -19614662 + DNAREP1_DM LINE Penelope 450 490 -104 1 596 274 26 0 0 chr2R 1532476 1532514 -19614194 + DNAREP1_DM LINE Penelope 86 123 -471 1 596 1180 140 68 76 chr2R 1532504 1532767 -19613941 + DNAREP1_DM LINE Penelope 310 570 -24 1 596 1767 214 88 6 chr2R 1532918 1533444 -19613264 + DMCR1A LINE CR1 1083 1651 -2819 1 596 293 188 58 0 chr2R 1533467 1533536 -19613172 + DMCR1A LINE CR1 3060 3132 -1338 1 596 997 167 68 30 chr2R 1533647 1533881 -19612827 + DNAREP1_DM LINE Penelope 341 583 -11 1 596 37 23 0 0 chr2R 1534231 1534275 -19612433 + AT_rich Low_complexity Low_complexity 1 44 0 1 596 21 0 0 0 chr2R 1534290 1534311 -19612397 + AT_rich Low_complexity Low_complexity 1 21 0 1 596 327 204 163 0 chr2R 1535405 1535503 -19611205 - DNAREP1_DM LINE Penelope -103 491 378 1 596 698 223 173 49 chr2R 1535663 1536073 -19610635 - DNAREP1_DM LINE Penelope -4 590 130 1 596 44 0 0 0 chr2R 1536134 1536178 -19610530 + AT_rich Low_complexity Low_complexity 1 44 0 1 596 40 37 0 0 chr2R 1536707 1536761 -19609947 + AT_rich Low_complexity Low_complexity 1 54 0 1 596 393 164 0 14 chr2R 1536944 1537018 -19609690 + FB4_DM DNA Tc1 2296 2368 -1721 1 596 257 185 37 0 chr2R 1537062 1537116 -19609592 + DNAREP1_DM LINE Penelope 421 476 -118 1 596 398 198 0 0 chr2R 1537138 1537224 -19609484 + DNAREP1_DM LINE Penelope 142 227 -367 1 596 348 138 0 0 chr2R 1537223 1537281 -19609427 + DNAREP1_DM LINE Penelope 537 594 0 1 596 499 171 23 8 chr2R 1537616 1537746 -19608962 - FB4_DM DNA Tc1 -1346 2743 2612 1 596 436 184 87 0 chr2R 1537764 1537867 -19608841 - FB4_DM DNA Tc1 -1852 2237 2126 1 596 298 115 0 19 chr2R 1537896 1537949 -19608759 - FB4_DM DNA Tc1 -2044 2045 1994 1 596 760 113 14 70 chr2R 1537950 1538093 -19608615 + DNAREP1_DM LINE Penelope 448 582 -12 1 596 378 69 0 0 chr2R 1538098 1538156 -19608552 + FB4_DM DNA Tc1 1157 1214 -2875 1 596 3277 113 32 6 chr2R 1538146 1538681 -19608027 + FB4_DM DNA Tc1 1449 1997 -2092 1 596 1324 151 88 19 chr2R 1538863 1539269 -19607439 - DNAREP1_DM LINE Penelope -29 565 2 1 596 419 84 233 78 chr2R 1540660 1540763 -19605945 + DNAREP1_DM LINE Penelope 334 452 -142 1 596 321 167 95 27 chr2R 1543549 1543623 -19603085 - DNAREP1_DM LINE Penelope -515 79 1 1 596 21 0 0 0 chr2R 1543889 1543910 -19602798 + AT_rich Low_complexity Low_complexity 1 21 0 1 596 1322 141 193 0 chr2R 1546023 1546292 -19600416 + DMRT1B LINE R1 2990 3310 -1873 1 596 2704 141 119 11 chr2R 1546290 1546835 -19599873 + DMRT1B LINE R1 3536 4139 -1044 1 596 1633 154 22 13 chr2R 1546823 1547139 -19599569 + DMRT1B LINE R1 4614 4932 -251 1 596 216 97 30 61 chr2R 1550879 1550945 -19595763 + (TTATA)n Simple_repeat Simple_repeat 2 65 0 1 596 22 0 0 0 chr2R 1551560 1551582 -19595126 + AT_rich Low_complexity Low_complexity 1 22 0 1 596 365 247 0 0 chr2R 1552696 1552785 -19593923 + DIVER2_I LTR Pao 490 578 -3569 1 596 854 302 35 6 chr2R 1552814 1553131 -19593577 + DIVER2_I LTR Pao 650 975 -3172 1 596 515 61 0 0 chr2R 1553415 1553481 -19593227 - DNAREP1_DM LINE Penelope -504 90 25 1 596 23 0 0 0 chr2R 1553481 1553504 -19593204 + AT_rich Low_complexity Low_complexity 1 23 0 1 596 243 114 0 0 chr2R 1553530 1553574 -19593134 + (TTTTTA)n Simple_repeat Simple_repeat 2 45 0 1 596 1126 109 198 9 chr2R 1553715 1553947 -19592761 + PROTOP_B DNA P 878 1153 0 1 596 28 0 0 0 chr2R 1554427 1554455 -19592253 + AT_rich Low_complexity Low_complexity 1 28 0 1 596 971 83 49 31 chr2R 1554607 1554769 -19591939 + DNAREP1_DM LINE Penelope 6 170 -424 1 596 397 264 0 0 chr2R 1555033 1555154 -19591554 - G4_DM LINE Jockey -295 3561 3441 1 596 24 32 0 0 chr2R 1555707 1555738 -19590970 + AT_rich Low_complexity Low_complexity 1 31 0 1 596 24 67 0 0 chr2R 1557445 1557490 -19589218 + AT_rich Low_complexity Low_complexity 1 45 0 1 596 225 102 0 48 chr2R 1557705 1557767 -19588941 + (TATAA)n Simple_repeat Simple_repeat 1 59 0 1 596 296 208 82 30 chr2R 1557856 1557990 -19588718 - DNAREP1_DM LINE Penelope -279 315 175 1 596 362 130 16 0 chr2R 1558054 1558134 -19588574 - DNAREP1_DM LINE Penelope -263 331 273 1 596 23 54 0 0 chr2R 1560174 1560211 -19586497 + AT_rich Low_complexity Low_complexity 1 37 0 1 596 25 65 0 0 chr2R 1561319 1561365 -19585343 + AT_rich Low_complexity Low_complexity 1 46 0 1 596 414 222 143 0 chr2R 1562496 1562622 -19584086 + DNAREP1_DM LINE Penelope 361 504 -90 1 596 22 56 0 0 chr2R 1563892 1563928 -19582780 + AT_rich Low_complexity Low_complexity 1 36 0 1 596 389 141 24 71 chr2R 1564040 1564124 -19582584 + DNAREP1_DM LINE Penelope 514 593 -1 1 596 23 0 0 0 chr2R 1564273 1564296 -19582412 + AT_rich Low_complexity Low_complexity 1 23 0 1 596 459 18 0 0 chr2R 1565650 1565707 -19581001 - Baggins1 LINE LOA 0 5453 5397 1 596 302 98 0 0 chr2R 1566100 1566141 -19580567 + DNAREP1_DM LINE Penelope 1 41 -553 1 596 1512 86 87 34 chr2R 1566304 1566568 -19580140 + DNAREP1_DM LINE Penelope 317 594 0 1 596 27 0 0 0 chr2R 1566598 1566625 -19580083 + AT_rich Low_complexity Low_complexity 1 27 0 1 596 25 31 0 0 chr2R 1569329 1569361 -19577347 + AT_rich Low_complexity Low_complexity 1 32 0 1 596 234 91 0 0 chr2R 1569744 1569777 -19576931 + (CAGC)n Simple_repeat Simple_repeat 3 35 0 1 596 225 0 0 0 chr2R 1571153 1571178 -19575530 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 597 35 0 0 0 chr2R 1574410 1574445 -19572263 + AT_rich Low_complexity Low_complexity 1 35 0 1 597 433 71 114 0 chr2R 1577469 1577539 -19569169 - DNAREP1_DM LINE Penelope -1 593 516 1 597 25 31 0 0 chr2R 1578168 1578200 -19568508 + AT_rich Low_complexity Low_complexity 1 32 0 1 597 267 79 0 0 chr2R 1578748 1578786 -19567922 + (CGGA)n Simple_repeat Simple_repeat 3 40 0 1 597 21 0 0 0 chr2R 1579899 1579920 -19566788 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 897 143 125 68 chr2R 1580161 1580409 -19566299 + DNAREP1_DM LINE Penelope 1 262 -332 1 597 1115 63 63 0 chr2R 1580416 1580574 -19566134 + DNAREP1_DM LINE Penelope 427 594 0 1 597 784 164 105 42 chr2R 1582202 1582393 -19564315 - DNAREP1_DM LINE Penelope 0 594 392 1 597 660 197 0 0 chr2R 1583709 1583851 -19562857 + DNAREP1_DM LINE Penelope 117 258 -336 1 597 337 292 54 7 chr2R 1583854 1584002 -19562706 + DNAREP1_DM LINE Penelope 24 178 -416 1 597 1071 145 108 39 chr2R 1584060 1584319 -19562389 + DNAREP1_DM LINE Penelope 179 455 -139 1 597 34 0 0 0 chr2R 1584886 1584920 -19561788 + AT_rich Low_complexity Low_complexity 1 34 0 1 597 24 0 0 0 chr2R 1584936 1584960 -19561748 + AT_rich Low_complexity Low_complexity 1 24 0 1 597 27 0 0 0 chr2R 1587927 1587954 -19558754 + AT_rich Low_complexity Low_complexity 1 27 0 1 597 1035 220 38 68 chr2R 1588004 1588399 -19558309 - DNAREP1_DM LINE Penelope -9 585 203 1 597 333 167 133 16 chr2R 1588390 1588518 -19558190 - DNAREP1_DM LINE Penelope -322 272 130 1 597 329 88 0 17 chr2R 1588505 1588563 -19558145 - DNAREP1_DM LINE Penelope -346 248 192 1 597 964 148 58 22 chr2R 1588550 1588953 -19557755 - DNAREP1_DM LINE Penelope -262 332 90 1 597 22 35 0 0 chr2R 1589030 1589059 -19557649 + AT_rich Low_complexity Low_complexity 1 29 0 1 597 689 119 42 0 chr2R 1593147 1593265 -19553443 - DNAREP1_DM LINE Penelope -29 565 443 1 597 496 226 140 91 chr2R 1593274 1593517 -19553191 - DNAREP1_DM LINE Penelope -36 558 304 1 597 25 31 0 0 chr2R 1593553 1593585 -19553123 + AT_rich Low_complexity Low_complexity 1 32 0 1 597 26 0 0 0 chr2R 1594036 1594062 -19552646 + AT_rich Low_complexity Low_complexity 1 26 0 1 597 31 44 0 0 chr2R 1597997 1598042 -19548666 + AT_rich Low_complexity Low_complexity 1 45 0 1 597 21 36 0 0 chr2R 1600114 1600142 -19546566 + AT_rich Low_complexity Low_complexity 1 28 0 1 597 189 107 0 0 chr2R 1601104 1601132 -19545576 + (CATA)n Simple_repeat Simple_repeat 1 28 0 1 597 26 0 0 0 chr2R 1602158 1602184 -19544524 + AT_rich Low_complexity Low_complexity 1 26 0 1 597 22 35 0 0 chr2R 1602453 1602482 -19544226 + AT_rich Low_complexity Low_complexity 1 29 0 1 597 275 107 53 0 chr2R 1604326 1604401 -19542307 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 597 323 171 0 41 chr2R 1605454 1605527 -19541181 + DNAREP1_DM LINE Penelope 1 70 -524 1 597 29 28 0 0 chr2R 1607024 1607060 -19539648 + AT_rich Low_complexity Low_complexity 1 36 0 1 597 1055 96 82 23 chr2R 1607266 1607437 -19539271 - DNAREP1_DM LINE Penelope -30 564 384 1 597 511 164 88 14 chr2R 1607452 1607611 -19539097 - DNAREP1_DM LINE Penelope -271 323 141 1 597 488 244 111 0 chr2R 1607620 1607800 -19538908 - DNAREP1_DM LINE Penelope -394 200 1 1 597 538 217 13 0 chr2R 1607785 1607937 -19538771 - DNAREP1_DM LINE Penelope -324 270 117 1 597 779 141 95 0 chr2R 1608127 1608326 -19538382 - DNAREP1_DM LINE Penelope -205 389 41 1 597 1113 216 85 108 chr2R 1608399 1608964 -19537744 - DNAREP1_DM LINE Penelope -23 571 20 1 597 206 172 15 45 chr2R 1609297 1609364 -19537344 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 1 597 348 146 0 0 chr2R 1609753 1609808 -19536900 + DNAREP1_DM LINE Penelope 1 55 -539 1 597 1096 79 129 0 chr2R 1609840 1610018 -19536690 + DNAREP1_DM LINE Penelope 394 594 0 1 597 338 233 90 0 chr2R 1609899 1610032 -19536676 - P_DG DNA P -3 2885 2741 1 597 243 0 0 0 chr2R 1610292 1610319 -19536389 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 597 200 95 23 45 chr2R 1611064 1611108 -19535600 + (TAA)n Simple_repeat Simple_repeat 3 45 0 1 597 471 199 236 8 chr2R 1611439 1611741 -19534967 + DNAREP1_DM LINE Penelope 27 320 -274 1 597 767 117 0 0 chr2R 1611759 1611879 -19534829 - DNAREP1_DM LINE Penelope -455 139 20 1 597 30 89 0 0 chr2R 1611879 1611958 -19534750 + AT_rich Low_complexity Low_complexity 1 79 0 1 597 631 158 121 9 chr2R 1612168 1612322 -19534386 + DNAREP1_DM LINE Penelope 431 577 -17 1 597 231 171 0 0 chr2R 1616279 1616320 -19530388 - DNAREP1_DM LINE Penelope -537 57 17 1 597 27 62 0 0 chr2R 1616320 1616368 -19530340 + AT_rich Low_complexity Low_complexity 1 48 0 1 597 21 0 0 0 chr2R 1616742 1616763 -19529945 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 370 162 0 0 chr2R 1617012 1617086 -19529622 + DNAREP1_DM LINE Penelope 50 123 -471 1 597 326 203 14 0 chr2R 1617083 1617157 -19529551 + DNAREP1_DM LINE Penelope 520 594 0 1 597 29 0 0 0 chr2R 1617245 1617274 -19529434 + AT_rich Low_complexity Low_complexity 1 29 0 1 597 1708 172 136 24 chr2R 1617274 1617739 -19528969 + DNAREP1_DM LINE Penelope 78 594 0 1 597 22 35 0 0 chr2R 1617902 1617931 -19528777 + AT_rich Low_complexity Low_complexity 1 29 0 1 597 453 179 0 0 chr2R 1618131 1618215 -19528493 + DNAREP1_DM LINE Penelope 1 84 -510 1 597 1045 160 23 32 chr2R 1618231 1618451 -19528257 + DNAREP1_DM LINE Penelope 276 493 -101 1 597 23 33 0 0 chr2R 1618822 1618852 -19527856 + AT_rich Low_complexity Low_complexity 1 30 0 1 597 213 154 0 0 chr2R 1619256 1619295 -19527413 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 597 258 211 0 0 chr2R 1620380 1620432 -19526276 + DNAREP1_DM LINE Penelope 20 71 -523 1 597 222 118 0 0 chr2R 1620432 1620466 -19526242 + (CGGA)n Simple_repeat Simple_repeat 4 37 0 1 597 654 118 126 0 chr2R 1620576 1620695 -19526013 - DNAREP1_DM LINE Penelope -14 580 447 1 597 408 160 21 11 chr2R 1620729 1620824 -19525884 - DNAREP1_DM LINE Penelope -285 309 214 1 597 336 176 27 0 chr2R 1620815 1620889 -19525819 - DNAREP1_DM LINE Penelope -139 455 380 1 597 1425 106 375 0 chr2R 1620955 1621387 -19525321 - DNAREP1_DM LINE Penelope 0 594 1 1 597 326 200 330 0 chr2R 1621541 1621656 -19525052 + DNAREP1_DM LINE Penelope 442 594 0 1 597 361 242 0 21 chr2R 1625241 1625338 -19521370 - DNAREP1_DM LINE Penelope -129 465 371 1 597 523 139 189 0 chr2R 1625680 1625802 -19520906 + DNAREP1_DM LINE Penelope 171 315 -279 1 597 1032 157 4 43 chr2R 1625791 1626044 -19520664 + DNAREP1_DM LINE Penelope 90 332 -262 1 597 1539 161 30 38 chr2R 1626052 1626420 -19520288 + PROTOP DNA P 4115 4479 -1 1 597 1536 102 174 5 chr2R 1626598 1627167 -19519541 + FB4_DM DNA Tc1 1106 1770 -2319 1 597 498 168 0 0 chr2R 1627181 1627276 -19519432 + FB4_DM DNA Tc1 2098 2192 -1897 1 597 926 140 161 9 chr2R 1627275 1627505 -19519203 + FB4_DM DNA Tc1 2489 2753 -1336 1 597 732 232 152 59 chr2R 1627672 1628112 -19518596 - DNAREP1_DM LINE Penelope 0 594 114 1 597 1369 149 56 52 chr2R 1628135 1628683 -19518025 - DNAREP1_DM LINE Penelope -264 330 1 1 597 705 121 93 0 chr2R 1630746 1630886 -19515822 + DNAREP1_DM LINE Penelope 1 153 -441 1 597 688 181 47 11 chr2R 1630887 1631077 -19515631 - DNAREP1_DM LINE Penelope -267 327 131 1 597 273 282 0 34 chr2R 1631169 1631257 -19515451 - PENELOPE LINE Penelope -120 4041 3957 1 597 1837 113 111 15 chr2R 1631811 1632215 -19514493 - DNAREP1_DM LINE Penelope -103 491 126 1 597 1471 161 173 28 chr2R 1634278 1634359 -19512349 - DNAREP1_DM LINE Penelope -9 585 505 1 597 302 61 0 57 chr2R 1634359 1634429 -19512279 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 597 1471 153 211 23 chr2R 1634429 1634843 -19511865 - DNAREP1_DM LINE Penelope -90 504 2 1 597 188 67 33 0 chr2R 1637457 1637487 -19509221 + (TATG)n Simple_repeat Simple_repeat 1 31 0 1 597 22 56 0 0 chr2R 1637681 1637717 -19508991 + AT_rich Low_complexity Low_complexity 1 36 0 1 597 183 68 0 92 chr2R 1637980 1638045 -19508663 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 597 21 0 0 0 chr2R 1641691 1641712 -19504996 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 21 0 0 0 chr2R 1643900 1643921 -19502787 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 23 0 0 0 chr2R 1644947 1644970 -19501738 + AT_rich Low_complexity Low_complexity 1 23 0 1 597 28 29 0 0 chr2R 1648170 1648205 -19498503 + AT_rich Low_complexity Low_complexity 1 35 0 1 597 289 201 31 35 chr2R 1649778 1649929 -19496779 + FB4_DM DNA Tc1 574 648 -3441 1 597 21 71 0 0 chr2R 1649929 1649971 -19496737 + AT_rich Low_complexity Low_complexity 1 42 0 1 597 287 163 0 0 chr2R 1652846 1652895 -19493813 + DNAREP1_DM LINE Penelope 511 559 -35 1 597 376 125 0 0 chr2R 1654585 1654641 -19492067 + DNAREP1_DM LINE Penelope 1 56 -538 1 597 1344 103 143 7 chr2R 1655998 1656408 -19490300 + DNAREP1_DM LINE Penelope 1 594 0 1 597 226 232 18 0 chr2R 1656557 1656613 -19490095 - DNAREP1_DM LINE Penelope -164 430 374 1 597 21 0 0 0 chr2R 1657509 1657530 -19489178 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 22 0 0 0 chr2R 1657603 1657625 -19489083 + AT_rich Low_complexity Low_complexity 1 22 0 1 597 246 188 233 19 chr2R 1657721 1657824 -19488884 + DNAREP1_DM LINE Penelope 450 574 -20 1 597 32 0 0 0 chr2R 1658197 1658229 -19488479 + AT_rich Low_complexity Low_complexity 1 32 0 1 597 1848 145 50 11 chr2R 1658594 1658957 -19487751 + DNAREP1_DM LINE Penelope 170 546 -48 1 597 21 71 0 0 chr2R 1659524 1659566 -19487142 + AT_rich Low_complexity Low_complexity 1 42 0 1 597 23 0 0 0 chr2R 1660584 1660607 -19486101 + AT_rich Low_complexity Low_complexity 1 23 0 1 597 246 81 0 0 chr2R 1660681 1660718 -19485990 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 597 1519 111 194 0 chr2R 1661115 1661430 -19485278 - DNAREP1_DM LINE Penelope 0 594 219 1 597 448 269 44 0 chr2R 1661433 1661615 -19485093 - DNAREP1_DM LINE Penelope -266 328 139 1 597 24 53 0 0 chr2R 1662266 1662304 -19484404 + AT_rich Low_complexity Low_complexity 1 38 0 1 597 28 29 0 0 chr2R 1664105 1664140 -19482568 + AT_rich Low_complexity Low_complexity 1 35 0 1 597 402 225 19 62 chr2R 1664160 1664321 -19482387 + DNAREP1_DM LINE Penelope 5 158 -436 1 597 275 161 18 0 chr2R 1664351 1664407 -19482301 + DNAREP1_DM LINE Penelope 538 594 0 1 597 22 56 0 0 chr2R 1666219 1666255 -19480453 + AT_rich Low_complexity Low_complexity 1 36 0 1 597 992 133 61 0 chr2R 1666307 1666472 -19480236 + DNAREP1_DM LINE Penelope 272 446 -148 1 597 249 200 83 0 chr2R 1666471 1666531 -19480177 + DNAREP1_DM LINE Penelope 272 336 -258 1 597 474 0 0 0 chr2R 1667302 1667353 -19479355 - DNAREP1_DM LINE Penelope -543 51 1 1 597 1095 88 146 68 chr2R 1667702 1667908 -19478800 - DNAREP1_DM LINE Penelope 0 594 373 1 597 639 123 91 15 chr2R 1667951 1668083 -19478625 - DNAREP1_DM LINE Penelope -451 143 2 1 597 291 114 0 0 chr2R 1668688 1668732 -19477976 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 597 839 110 307 49 chr2R 1668749 1668925 -19477783 + DNAREP1_DM LINE Penelope 359 579 -15 1 597 578 53 13 26 chr2R 1668922 1669000 -19477708 + MINOS DNA Tc1 812 888 -887 1 597 2099 157 164 11 chr2R 1669008 1669472 -19477236 + MINOS DNA Tc1 1233 1767 -8 1 597 957 125 162 81 chr2R 1669276 1669511 -19477197 - MINOS DNA Tc1 -1511 264 11 1 597 200 98 73 0 chr2R 1669567 1669608 -19477100 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 597 1040 122 176 35 chr2R 1670590 1670844 -19475864 - DNAREP1_DM LINE Penelope -162 432 1 1 597 2836 235 95 62 chr2R 1672054 1673361 -19473347 + Gypsy12A_LTR LTR Gypsy 54 1403 -877 1 597 2549 96 136 154 chr2R 1673437 1674042 -19472666 + DNAREP1_DM LINE Penelope 1 594 0 1 597 22 35 0 0 chr2R 1674715 1674744 -19471964 + AT_rich Low_complexity Low_complexity 1 29 0 1 597 494 35 0 0 chr2R 1675646 1675703 -19471005 + DNAREP1_DM LINE Penelope 430 486 -108 1 597 295 145 45 61 chr2R 1676462 1676528 -19470180 - DNAREP1_DM LINE Penelope -243 351 287 1 597 746 168 8 0 chr2R 1676606 1676737 -19469971 - DNAREP1_DM LINE Penelope -105 489 358 1 597 417 143 0 0 chr2R 1676871 1676934 -19469774 - DNAREP1_DM LINE Penelope -531 63 1 1 597 1310 100 304 14 chr2R 1678188 1678618 -19468090 - DNAREP1_DM LINE Penelope 0 594 1 1 597 21 0 0 0 chr2R 1678753 1678774 -19467934 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 225 227 0 0 chr2R 1679554 1679598 -19467110 - DNAREP1_DM LINE Penelope -104 490 447 1 597 39 22 0 0 chr2R 1680895 1680941 -19465767 + AT_rich Low_complexity Low_complexity 1 46 0 1 597 1540 158 69 123 chr2R 1681012 1681460 -19465248 + DNAREP1_DM LINE Penelope 1 424 -170 1 597 511 224 13 65 chr2R 1681461 1681614 -19465094 - DNAREP1_DM LINE Penelope -109 485 341 1 597 455 149 11 11 chr2R 1682124 1682219 -19464489 - DNAREP1_DM LINE Penelope -314 280 186 1 597 986 75 89 0 chr2R 1682301 1682447 -19464261 - DNAREP1_DM LINE Penelope -435 159 1 1 597 322 64 43 0 chr2R 1682452 1682499 -19464209 + BARI1 DNA Tc1 40 88 -1662 1 597 430 36 18 0 chr2R 1682511 1682567 -19464141 - BARI1 DNA Tc1 -1657 93 37 1 597 852 191 124 53 chr2R 1684083 1684503 -19462205 + DNAREP1_DM LINE Penelope 2 594 0 1 597 231 233 0 0 chr2R 1689032 1689075 -19457633 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 1 597 22 70 0 0 chr2R 1689995 1690038 -19456670 + AT_rich Low_complexity Low_complexity 1 43 0 1 597 37 0 0 0 chr2R 1690461 1690498 -19456210 + AT_rich Low_complexity Low_complexity 1 37 0 1 597 42 57 0 0 chr2R 1690600 1690670 -19456038 + AT_rich Low_complexity Low_complexity 1 70 0 1 597 180 0 0 0 chr2R 1694361 1694381 -19452327 + (ATTTG)n Simple_repeat Simple_repeat 2 21 0 1 597 21 0 0 0 chr2R 1695048 1695069 -19451639 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 1600 105 114 88 chr2R 1697573 1697981 -19448727 + DNAREP1_DM LINE Penelope 22 577 -17 1 597 534 55 55 0 chr2R 1697990 1698063 -19448645 + DNAREP1_DM LINE Penelope 518 594 0 1 597 29 0 0 0 chr2R 1698113 1698142 -19448566 + AT_rich Low_complexity Low_complexity 1 29 0 1 597 189 74 0 0 chr2R 1703016 1703043 -19443665 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 598 288 0 0 0 chr2R 1714011 1714043 -19432665 + (GGATG)n Simple_repeat Simple_repeat 1 32 0 1 598 21 0 0 0 chr2R 1719187 1719208 -19427500 + AT_rich Low_complexity Low_complexity 1 21 0 1 598 22 0 0 0 chr2R 1726987 1727009 -19419699 + AT_rich Low_complexity Low_complexity 1 22 0 1 598 209 33 33 0 chr2R 1732500 1732530 -19414178 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 598 203 103 0 49 chr2R 1732588 1732663 -19414045 + (CAGAG)n Simple_repeat Simple_repeat 1 71 0 1 598 31 0 0 0 chr2R 1734033 1734064 -19412644 + AT_rich Low_complexity Low_complexity 1 31 0 1 598 21 0 0 0 chr2R 1735944 1735965 -19410743 + GC_rich Low_complexity Low_complexity 1 21 0 1 598 285 258 0 0 chr2R 1737121 1737187 -19409521 + (CAA)n Simple_repeat Simple_repeat 2 67 0 1 598 23 0 0 0 chr2R 1737264 1737287 -19409421 + AT_rich Low_complexity Low_complexity 1 23 0 1 598 21 0 0 0 chr2R 1738506 1738527 -19408181 + AT_rich Low_complexity Low_complexity 1 21 0 1 598 365 67 33 0 chr2R 1740053 1740113 -19406595 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 1 598 246 81 0 0 chr2R 1741371 1741408 -19405300 + (TTCTG)n Simple_repeat Simple_repeat 3 39 0 1 598 332 106 0 29 chr2R 1747672 1747740 -19398968 + (CAAA)n Simple_repeat Simple_repeat 4 69 0 1 598 26 30 0 0 chr2R 1749601 1749634 -19397074 + AT_rich Low_complexity Low_complexity 1 33 0 1 598 1546 184 49 3 chr2R 1750249 1750554 -19396154 - DNAREP1_DM LINE Penelope -155 439 121 1 598 571 159 363 7 chr2R 1750565 1750711 -19395997 - DNAREP1_DM LINE Penelope -388 206 9 1 598 799 222 225 40 chr2R 1751231 1751550 -19395158 - DNAREP1_DM LINE Penelope -25 569 192 1 598 400 119 0 0 chr2R 1753173 1753232 -19393476 - DNAREP1_DM LINE Penelope -163 431 373 1 598 340 250 0 0 chr2R 1753255 1753331 -19393377 - DNAREP1_DM LINE Penelope -390 204 129 1 598 288 268 0 0 chr2R 1756171 1756242 -19390466 + DNAREP1_DM LINE Penelope 1 71 -523 1 598 281 221 217 21 chr2R 1756363 1756506 -19390202 - DNAREP1_DM LINE Penelope -271 323 153 1 598 2205 11 26 11 chr2R 1756835 1757106 -19389602 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 598 41605 1 1 0 chr2R 1757106 1761583 -19385125 + BLASTOPIA_I LTR Gypsy 1 4481 0 1 598 2205 11 26 11 chr2R 1761583 1761854 -19384854 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 598 450 167 0 0 chr2R 1766009 1766081 -19380627 + DNAREP1_DM LINE Penelope 8 79 -515 1 598 1368 90 0 75 chr2R 1766132 1766372 -19380336 - DNAREP1_DM LINE Penelope -9 585 364 1 598 26 30 0 0 chr2R 1770812 1770845 -19375863 + AT_rich Low_complexity Low_complexity 1 33 0 1 598 975 141 193 0 chr2R 1771129 1771321 -19375387 + DNAREP1_DM LINE Penelope 366 594 0 1 598 180 0 0 0 chr2R 1774355 1774375 -19372333 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 1 598 294 183 0 32 chr2R 1776623 1776685 -19370023 + DNAREP1_DM LINE Penelope 32 91 -503 1 598 2330 116 109 0 chr2R 1776688 1777084 -19369624 + DNAREP1_DM LINE Penelope 8 446 -148 1 598 463 94 0 0 chr2R 1777128 1777192 -19369516 - DNAREP1_DM LINE Penelope -530 64 1 1 598 183 205 0 0 chr2R 1777608 1777647 -19369061 + (CAG)n Simple_repeat Simple_repeat 3 41 0 1 598 192 152 0 0 chr2R 1782201 1782234 -19364474 + (CGAAT)n Simple_repeat Simple_repeat 4 36 0 1 598 245 29 0 29 chr2R 1782839 1782874 -19363834 + (CATCC)n Simple_repeat Simple_repeat 3 36 0 1 598 22 0 0 0 chr2R 1784163 1784185 -19362523 + AT_rich Low_complexity Low_complexity 1 22 0 1 598 236 91 23 0 chr2R 1785883 1785927 -19360781 + (CGGA)n Simple_repeat Simple_repeat 3 47 0 1 598 4579 6 0 0 chr2R 1789720 1790227 -19356481 - DM176_LTR LTR Gypsy 0 507 1 1 598 57298 1 1 5 chr2R 1790227 1796130 -19350578 - DM176_I LTR Gypsy 0 6420 537 1 598 208 28 26 53 chr2R 1796130 1796168 -19350540 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1 598 57298 1 1 5 chr2R 1796168 1796710 -19349998 - DM176_I LTR Gypsy -5884 536 1 1 598 4579 6 0 0 chr2R 1796710 1797217 -19349491 - DM176_LTR LTR Gypsy 0 507 1 1 598 24 77 0 0 chr2R 1797264 1797316 -19349392 + AT_rich Low_complexity Low_complexity 1 52 0 1 598 230 167 17 0 chr2R 1799095 1799155 -19347553 + (CCCGAA)n Simple_repeat Simple_repeat 3 63 0 1 598 231 36 0 0 chr2R 1799242 1799270 -19347438 + (CAGC)n Simple_repeat Simple_repeat 4 31 0 1 598 221 155 17 0 chr2R 1799410 1799468 -19347240 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 598 200 125 25 0 chr2R 1803366 1803406 -19343302 + (TGAA)n Simple_repeat Simple_repeat 2 42 0 1 598 1608 208 172 0 chr2R 1810676 1811071 -19335637 - LINEJ1_DM LINE Jockey -1952 3068 2606 1 598 3238 202 75 17 chr2R 1811050 1811806 -19334902 + LINEJ1_DM LINE Jockey 3018 3817 -1203 1 598 329 140 0 0 chr2R 1811837 1811887 -19334821 + LINEJ1_DM LINE Jockey 3901 3950 -1070 1 598 376 210 46 53 chr2R 1812013 1812144 -19334564 + LINEJ1_DM LINE Jockey 4891 5020 0 1 598 2328 114 200 6 chr2R 1819142 1819618 -19327090 - DNAREP1_DM LINE Penelope -16 578 11 1 598 363 138 169 36 chr2R 1819608 1819691 -19327017 + DNAREP1_DM LINE Penelope 404 497 -97 1 598 203 339 0 0 chr2R 1822725 1822790 -19323918 + (CTG)n Simple_repeat Simple_repeat 1 65 0 1 598 225 254 17 0 chr2R 1824278 1824337 -19322371 + DNAREP1_DM LINE Penelope 33 92 -502 1 598 271 232 407 0 chr2R 1826773 1826923 -19319785 - DNAREP1_DM LINE Penelope -2 592 383 1 598 250 29 0 56 chr2R 1827556 1827592 -19319116 + PROTOP_B DNA P 506 539 -614 1 598 1336 145 113 33 chr2R 1827682 1827983 -19318725 + DNAREP1_DM LINE Penelope 202 497 -97 1 598 782 306 22 19 chr2R 1828026 1828343 -19318365 + G5_DM LINE Jockey 3267 3584 -1272 1 598 231 216 19 19 chr2R 1828322 1828374 -19318334 + G4_DM LINE Jockey 2965 3016 -840 1 598 264 150 0 0 chr2R 1829230 1829270 -19317438 + (CCCGAA)n Simple_repeat Simple_repeat 2 41 0 1 598 234 202 300 9 chr2R 1830156 1830266 -19316442 + DNAREP1_DM LINE Penelope 403 544 -50 1 598 302 276 10 10 chr2R 1830274 1830373 -19316335 - DNAREP1_DM LINE Penelope -495 99 1 1 598 24 0 0 0 chr2R 1831031 1831055 -19315653 + AT_rich Low_complexity Low_complexity 1 24 0 1 598 561 254 65 9 chr2R 1831208 1831423 -19315285 + DNAREP1_DM LINE Penelope 184 410 -184 1 598 2246 205 40 35 chr2R 1832300 1832870 -19313838 + DNAREP1_DM LINE Penelope 22 594 0 1 599 207 69 0 0 chr2R 1835011 1835040 -19311668 + (T)n Simple_repeat Simple_repeat 1 29 0 1 599 707 223 149 0 chr2R 1835644 1835832 -19310876 + DNAREP1_DM LINE Penelope 378 593 -1 1 599 747 90 0 0 chr2R 1836784 1836884 -19309824 - DNAREP1_DM LINE Penelope 0 594 495 1 599 837 126 86 74 chr2R 1837139 1837376 -19309332 - DNAREP1_DM LINE Penelope -244 350 1 1 599 298 229 0 0 chr2R 1838414 1838475 -19308233 - DNAREP1_DM LINE Penelope -103 491 431 1 599 696 125 184 62 chr2R 1838489 1838668 -19308040 + DNAREP1_DM LINE Penelope 93 293 -301 1 599 396 219 229 26 chr2R 1838818 1839010 -19307698 - DMCR1A LINE CR1 -3662 808 578 1 599 3404 58 96 0 chr2R 1839033 1839532 -19307176 - I_DM LINE I -761 5470 4924 1 599 1152 219 117 3 chr2R 1839544 1839878 -19306830 - DMCR1A LINE CR1 -3903 567 196 1 599 42 0 0 0 chr2R 1840624 1840666 -19306042 + AT_rich Low_complexity Low_complexity 1 42 0 1 599 21 0 0 0 chr2R 1841581 1841602 -19305106 + AT_rich Low_complexity Low_complexity 1 21 0 1 599 1026 78 99 0 chr2R 1842234 1842375 -19304333 - DNAREP1_DM LINE Penelope -1 593 439 1 599 31 0 0 0 chr2R 1842375 1842406 -19304302 + AT_rich Low_complexity Low_complexity 1 31 0 1 599 321 253 143 26 chr2R 1843663 1843817 -19302891 + DNAREP1_DM LINE Penelope 1 172 -422 1 599 581 183 21 74 chr2R 1843803 1843992 -19302716 + DNAREP1_DM LINE Penelope 83 261 -333 1 599 24 0 0 0 chr2R 1844128 1844152 -19302556 + AT_rich Low_complexity Low_complexity 1 24 0 1 599 301 306 44 7 chr2R 1844169 1844304 -19302404 - DNAREP1_DM LINE Penelope -454 140 1 1 599 320 212 0 0 chr2R 1844381 1844447 -19302261 - DNAREP1_DM LINE Penelope -107 487 422 1 599 21 57 0 0 chr2R 1844608 1844643 -19302065 + AT_rich Low_complexity Low_complexity 1 35 0 1 599 338 207 0 12 chr2R 1847439 1847510 -19299198 + DNAREP1_DM LINE Penelope 431 489 -105 1 599 25 0 0 0 chr2R 1849288 1849313 -19297395 + AT_rich Low_complexity Low_complexity 1 25 0 1 599 261 167 21 0 chr2R 1852146 1852194 -19294514 - DNAREP1_DM LINE Penelope -6 588 540 1 599 209 139 23 0 chr2R 1852484 1852527 -19294181 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 599 320 59 20 0 chr2R 1852855 1852906 -19293802 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 599 2284 116 134 6 chr2R 1853401 1853898 -19292810 - DNAREP1_DM LINE Penelope 0 594 3 1 599 643 65 146 18 chr2R 1855481 1855591 -19291117 + DNAREP1_DM LINE Penelope 379 502 -92 1 599 1236 111 19 5 chr2R 1855568 1855776 -19290932 - I_DM LINE I -755 5476 5266 1 599 459 121 0 0 chr2R 1855781 1855847 -19290861 + DNAREP1_DM LINE Penelope 500 565 -29 1 599 22 56 0 0 chr2R 1855867 1855903 -19290805 + AT_rich Low_complexity Low_complexity 1 36 0 1 599 530 192 128 0 chr2R 1856401 1856526 -19290182 - DNAREP1_DM LINE Penelope -13 581 441 1 599 21 0 0 0 chr2R 1856616 1856637 -19290071 + AT_rich Low_complexity Low_complexity 1 21 0 1 599 257 185 15 0 chr2R 1865325 1865390 -19281318 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 599 29 28 0 0 chr2R 1868470 1868506 -19278202 + AT_rich Low_complexity Low_complexity 1 36 0 1 599 40 21 0 0 chr2R 1871081 1871128 -19275580 + AT_rich Low_complexity Low_complexity 1 47 0 1 599 290 235 144 80 chr2R 1871362 1871487 -19275221 - DNAREP1_DM LINE Penelope -2 592 460 1 599 24 0 0 0 chr2R 1872087 1872111 -19274597 + AT_rich Low_complexity Low_complexity 1 24 0 1 599 302 230 135 39 chr2R 1872592 1872696 -19274012 + DNAREP1_DM LINE Penelope 410 523 -71 1 599 449 180 0 130 chr2R 1873629 1873744 -19272964 + DNAREP1_DM LINE Penelope 379 478 -116 1 599 22 35 0 0 chr2R 1873894 1873923 -19272785 + AT_rich Low_complexity Low_complexity 1 29 0 1 599 21 36 0 0 chr2R 1874326 1874354 -19272354 + AT_rich Low_complexity Low_complexity 1 28 0 1 599 21 36 0 0 chr2R 1874380 1874408 -19272300 + AT_rich Low_complexity Low_complexity 1 28 0 1 599 26 0 0 0 chr2R 1874722 1874748 -19271960 + AT_rich Low_complexity Low_complexity 1 26 0 1 599 1639 126 100 20 chr2R 1874777 1875175 -19271533 + DNAREP1_DM LINE Penelope 1 548 -46 1 599 240 170 21 0 chr2R 1875415 1875462 -19271246 - DNAREP1_DM LINE Penelope -543 51 4 1 599 54 0 0 0 chr2R 1876724 1876778 -19269930 + AT_rich Low_complexity Low_complexity 1 54 0 1 599 350 185 0 15 chr2R 1876963 1877029 -19269679 + DNAREP1_DM LINE Penelope 8 72 -522 1 599 1244 205 22 7 chr2R 1877024 1877294 -19269414 + DNAREP1_DM LINE Penelope 216 489 -105 1 599 239 0 32 0 chr2R 1877297 1877328 -19269380 + (TTATA)n Simple_repeat Simple_repeat 4 35 0 1 599 22 0 0 0 chr2R 1877377 1877399 -19269309 + AT_rich Low_complexity Low_complexity 1 22 0 1 599 31 0 0 0 chr2R 1877417 1877448 -19269260 + AT_rich Low_complexity Low_complexity 1 31 0 1 599 277 185 19 0 chr2R 1881982 1882036 -19264672 - DNAREP1_DM LINE Penelope -539 55 1 1 599 22 35 0 0 chr2R 1882106 1882135 -19264573 + AT_rich Low_complexity Low_complexity 1 29 0 1 599 24 32 0 0 chr2R 1883268 1883299 -19263409 + AT_rich Low_complexity Low_complexity 1 31 0 1 599 22 56 0 0 chr2R 1883913 1883949 -19262759 + AT_rich Low_complexity Low_complexity 1 36 0 1 599 329 198 136 19 chr2R 1890337 1890440 -19256268 - DNAREP1_DM LINE Penelope -2 592 478 1 599 278 122 2 0 chr2R 1890535 1890582 -19256126 - DNAREP1_DM LINE Penelope -419 175 134 1 599 202 209 45 0 chr2R 1891457 1891524 -19255184 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 599 27 0 0 0 chr2R 1892896 1892923 -19253785 + AT_rich Low_complexity Low_complexity 1 27 0 1 599 406 226 81 52 chr2R 1892948 1893121 -19253587 - DNAREP1_DM LINE Penelope -63 531 354 1 599 41 36 0 0 chr2R 1893186 1893241 -19253467 + AT_rich Low_complexity Low_complexity 1 55 0 1 599 241 221 0 42 chr2R 1899472 1899574 -19247134 + (CATATA)n Simple_repeat Simple_repeat 1 97 0 1 599 33 43 0 0 chr2R 1899967 1900014 -19246694 + AT_rich Low_complexity Low_complexity 1 47 0 1 599 21 36 0 0 chr2R 1903738 1903766 -19242942 + AT_rich Low_complexity Low_complexity 1 28 0 1 599 683 266 49 15 chr2R 1903885 1904124 -19242584 - DNAREP1_DM LINE Penelope -113 481 108 1 599 35 54 0 0 chr2R 1904786 1904842 -19241866 + AT_rich Low_complexity Low_complexity 1 56 0 1 599 27 49 0 0 chr2R 1907591 1907632 -19239076 + AT_rich Low_complexity Low_complexity 1 41 0 1 599 295 137 0 56 chr2R 1907939 1907993 -19238715 + DNAREP1_DM LINE Penelope 447 497 -97 1 599 183 80 0 0 chr2R 1910950 1910975 -19235733 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 599 25 31 0 0 chr2R 1910987 1911019 -19235689 + AT_rich Low_complexity Low_complexity 1 32 0 1 599 693 217 50 78 chr2R 1911194 1911503 -19235205 - DNAREP1_DM LINE Penelope -168 426 1 1 599 1924 109 211 92 chr2R 1911581 1912112 -19234596 - DNAREP1_DM LINE Penelope 0 594 1 1 599 225 149 0 41 chr2R 1913065 1913114 -19233594 + TIRANT_I LTR Gypsy 6016 6062 -1630 1 599 28 48 0 0 chr2R 1913748 1913790 -19232918 + AT_rich Low_complexity Low_complexity 1 42 0 1 599 1598 184 62 133 chr2R 1917750 1918358 -19228350 + DNAREP1_DM LINE Penelope 1 565 -29 1 599 744 156 104 0 chr2R 1918846 1918981 -19227727 - DNAREP1_DM LINE Penelope 0 594 446 1 599 843 170 71 48 chr2R 1919012 1919215 -19227493 - DNAREP1_DM LINE Penelope -243 351 18 1 599 1145 156 99 0 chr2R 1921624 1921867 -19224841 - DNAREP1_DM LINE Penelope -279 315 49 1 599 644 219 190 15 chr2R 1921897 1922171 -19224537 + FB4_DM DNA Tc1 77 398 -3691 1 599 838 133 409 8 chr2R 1922225 1922482 -19224226 - FB4_DM DNA Tc1 -3729 360 1 1 599 217 51 0 49 chr2R 1922605 1922646 -19224062 + (TATAA)n Simple_repeat Simple_repeat 1 39 0 1 599 252 170 0 0 chr2R 1922643 1922696 -19224012 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 599 546 250 146 33 chr2R 1926444 1926684 -19220024 + DNAREP1_DM LINE Penelope 210 476 -118 1 599 638 170 199 11 chr2R 1928535 1928830 -19217878 - DNAREP1_DM LINE Penelope -108 486 1 1 599 320 136 51 0 chr2R 1928839 1928898 -19217810 - PROTOP_B DNA P -22 1131 1070 1 599 24 53 0 0 chr2R 1929268 1929306 -19217402 + AT_rich Low_complexity Low_complexity 1 38 0 1 599 462 223 74 8 chr2R 1933225 1933347 -19213361 + DNAREP1_DM LINE Penelope 1 130 -464 1 599 371 295 8 8 chr2R 1933550 1933673 -19213035 + DMRP1 Unknown Unknown 148 270 -76 1 599 673 221 270 10 chr2R 1933739 1933939 -19212769 - DNAREP1_DM LINE Penelope -4 590 339 1 599 30 45 0 0 chr2R 1934060 1934104 -19212604 + AT_rich Low_complexity Low_complexity 1 44 0 1 599 23 0 0 0 chr2R 1935580 1935603 -19211105 + AT_rich Low_complexity Low_complexity 1 23 0 1 599 422 86 0 35 chr2R 1936437 1936505 -19210203 + DNAREP1_DM LINE Penelope 433 490 -104 1 599 21 36 0 0 chr2R 1937400 1937428 -19209280 + AT_rich Low_complexity Low_complexity 1 28 0 1 599 21 0 0 0 chr2R 1938095 1938116 -19208592 + AT_rich Low_complexity Low_complexity 1 21 0 1 599 186 43 0 0 chr2R 1938260 1938283 -19208425 + (CAT)n Simple_repeat Simple_repeat 1 23 0 1 599 21 0 0 0 chr2R 1941134 1941155 -19205553 + AT_rich Low_complexity Low_complexity 1 21 0 1 599 452 147 0 0 chr2R 1948792 1948860 -19197848 + DNAREP1_DM LINE Penelope 1 68 -526 1 599 276 206 14 56 chr2R 1948869 1948941 -19197767 + DNAREP1_DM LINE Penelope 380 448 -146 1 599 219 167 24 0 chr2R 1950035 1950077 -19196631 + CT-rich Low_complexity Low_complexity 1 43 0 1 600 26 64 0 0 chr2R 1966140 1966187 -19180521 + AT_rich Low_complexity Low_complexity 1 47 0 1 600 752 93 9 0 chr2R 1973574 1973681 -19173027 + DMRP1 Unknown Unknown 3 110 -236 1 600 360 0 0 0 chr2R 1973765 1973805 -19172903 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1 600 21 36 0 0 chr2R 1974505 1974533 -19172175 + AT_rich Low_complexity Low_complexity 1 28 0 1 600 244 196 59 0 chr2R 1975032 1975083 -19171625 + DNAREP1_DM LINE Penelope 390 443 -151 1 600 22 35 0 0 chr2R 1975146 1975175 -19171533 + AT_rich Low_complexity Low_complexity 1 29 0 1 600 243 0 0 0 chr2R 1975340 1975367 -19171341 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 600 205 152 0 42 chr2R 1977918 1977966 -19168742 + T-rich Low_complexity Low_complexity 4 49 0 1 600 23 0 0 0 chr2R 1978604 1978627 -19168081 + AT_rich Low_complexity Low_complexity 1 23 0 1 600 21 0 0 0 chr2R 1978928 1978949 -19167759 + AT_rich Low_complexity Low_complexity 1 21 0 1 600 21 0 0 0 chr2R 1979336 1979357 -19167351 + AT_rich Low_complexity Low_complexity 1 21 0 1 600 33 0 0 0 chr2R 1979545 1979578 -19167130 + AT_rich Low_complexity Low_complexity 1 33 0 1 600 403 310 0 0 chr2R 1980427 1980556 -19166152 + (CTGGGG)n Simple_repeat Simple_repeat 2 130 0 1 600 225 132 0 0 chr2R 1980578 1980616 -19166092 + (CTGGGG)n Simple_repeat Simple_repeat 2 39 0 1 600 47751 1 0 1 chr2R 1984278 1989408 -19157300 + BS LINE Jockey 1 5126 0 1 600 218 116 23 0 chr2R 1991403 1991446 -19155262 + (TTCGGG)n Simple_repeat Simple_repeat 1 44 0 1 600 212 162 0 0 chr2R 1991656 1991693 -19155015 + CT-rich Low_complexity Low_complexity 2 38 0 1 600 21 57 0 0 chr2R 1994820 1994855 -19151853 + AT_rich Low_complexity Low_complexity 1 35 0 1 600 216 0 0 0 chr2R 1995477 1995501 -19151207 + (CAT)n Simple_repeat Simple_repeat 1 24 0 1 600 243 61 0 0 chr2R 1996236 1996269 -19150439 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 600 215 218 36 0 chr2R 1997424 1997479 -19149229 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 600 25 31 0 0 chr2R 2000446 2000478 -19146230 + AT_rich Low_complexity Low_complexity 1 32 0 1 600 205 27 0 75 chr2R 2000519 2000559 -19146149 + (TTTTTG)n Simple_repeat Simple_repeat 5 41 0 1 600 186 71 0 0 chr2R 2002219 2002247 -19144461 + (A)n Simple_repeat Simple_repeat 1 28 0 1 600 25 0 0 0 chr2R 2002327 2002352 -19144356 + AT_rich Low_complexity Low_complexity 1 25 0 1 600 24 32 0 0 chr2R 2005834 2005865 -19140843 + AT_rich Low_complexity Low_complexity 1 31 0 1 600 207 176 0 0 chr2R 2006142 2006176 -19140532 + (TATG)n Simple_repeat Simple_repeat 1 34 0 1 600 22 35 0 0 chr2R 2007108 2007137 -19139571 + AT_rich Low_complexity Low_complexity 1 29 0 1 600 222 184 0 0 chr2R 2008187 2008225 -19138483 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 600 220 104 62 0 chr2R 2009246 2009294 -19137414 + (TTA)n Simple_repeat Simple_repeat 2 52 0 1 600 21 0 0 0 chr2R 2010553 2010574 -19136134 + GC_rich Low_complexity Low_complexity 1 21 0 1 600 192 158 0 0 chr2R 2012859 2012897 -19133811 + A-rich Low_complexity Low_complexity 5 42 0 1 600 200 170 42 21 chr2R 2013138 2013186 -19133522 + (CATA)n Simple_repeat Simple_repeat 4 52 0 1 600 23 0 0 0 chr2R 2014756 2014779 -19131929 + AT_rich Low_complexity Low_complexity 1 23 0 1 600 228 67 0 0 chr2R 2021952 2021982 -19124726 + (CTG)n Simple_repeat Simple_repeat 3 32 0 1 600 29 47 0 0 chr2R 2027350 2027393 -19119315 + AT_rich Low_complexity Low_complexity 1 43 0 1 600 250 183 33 16 chr2R 2028107 2028168 -19118540 + A-rich Low_complexity Low_complexity 5 66 0 1 600 24 0 0 0 chr2R 2029744 2029768 -19116940 + AT_rich Low_complexity Low_complexity 1 24 0 1 600 240 143 0 0 chr2R 2033180 2033222 -19113486 + (TATG)n Simple_repeat Simple_repeat 3 44 0 1 600 213 245 20 0 chr2R 2034590 2034639 -19112069 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1 600 180 200 0 0 chr2R 2035467 2035507 -19111201 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 600 34 55 0 0 chr2R 2038358 2038413 -19108295 + AT_rich Low_complexity Low_complexity 1 55 0 1 600 31 0 0 0 chr2R 2038457 2038488 -19108220 + AT_rich Low_complexity Low_complexity 1 31 0 1 600 25 0 0 0 chr2R 2039093 2039118 -19107590 + AT_rich Low_complexity Low_complexity 1 25 0 1 600 40 21 0 0 chr2R 2040811 2040858 -19105850 + AT_rich Low_complexity Low_complexity 1 47 0 1 600 22 35 0 0 chr2R 2041256 2041285 -19105423 + AT_rich Low_complexity Low_complexity 1 29 0 1 600 712 121 124 103 chr2R 2042214 2042399 -19104309 - DNAREP1_DM LINE Penelope 0 594 406 1 600 850 99 232 56 chr2R 2042643 2042893 -19103815 + DMRP1 Unknown Unknown 42 335 -11 1 600 337 184 62 27 chr2R 2042986 2043098 -19103610 - DNAREP1_DM LINE Penelope -297 297 182 1 600 259 178 0 0 chr2R 2043153 2043198 -19103510 - DNAREP1_DM LINE Penelope -548 46 2 1 600 235 273 0 25 chr2R 2043877 2043956 -19102752 + GA-rich Low_complexity Low_complexity 2 78 0 1 600 403 149 111 33 chr2R 2046825 2046915 -19099793 + DNAREP1_DM LINE Penelope 440 536 -58 1 600 477 215 52 0 chr2R 2048142 2048277 -19098431 + DNAREP1_DM LINE Penelope 10 151 -443 1 600 1165 132 108 35 chr2R 2048493 2048752 -19097956 - DNAREP1_DM LINE Penelope 0 594 317 1 600 239 188 0 0 chr2R 2048738 2048786 -19097922 - DNAREP1_DM LINE Penelope -430 164 117 1 600 739 76 42 84 chr2R 2049124 2049267 -19097441 - DNAREP1_DM LINE Penelope 0 594 458 1 600 426 241 154 44 chr2R 2049311 2049493 -19097215 - DNAREP1_DM LINE Penelope -392 202 1 1 600 28 95 0 0 chr2R 2049605 2049689 -19097019 + AT_rich Low_complexity Low_complexity 1 84 0 1 600 1853 82 13 17 chr2R 2050272 2050571 -19096137 - DNAREP1_DM LINE Penelope -296 298 1 1 600 3095 38 151 5 chr2R 2050727 2052101 -19094607 - TC1-2_DM DNA Tc1 0 1644 1 1 600 263 57 0 0 chr2R 2052304 2052348 -19094360 - PROTOP_B DNA P -614 539 496 1 600 31 0 0 0 chr2R 2052348 2052379 -19094329 + AT_rich Low_complexity Low_complexity 1 31 0 1 600 467 183 11 0 chr2R 2052472 2052565 -19094143 - DNAREP1_DM LINE Penelope -376 218 125 1 600 259 126 20 31 chr2R 2052797 2052895 -19093813 + (TTA)n Simple_repeat Simple_repeat 2 98 0 1 600 243 204 73 31 chr2R 2053017 2053113 -19093595 + DNAREP1_DM LINE Penelope 224 323 -271 1 600 378 161 37 0 chr2R 2053129 2053210 -19093498 - DNAREP1_DM LINE Penelope -510 84 1 1 600 26 30 0 0 chr2R 2054018 2054051 -19092657 + AT_rich Low_complexity Low_complexity 1 33 0 1 600 234 108 0 0 chr2R 2057379 2057416 -19089292 + PROTOP_A DNA P 503 539 -566 1 600 243 47 116 0 chr2R 2057385 2057428 -19089280 - PROTOP_B DNA P -614 539 492 1 600 243 267 13 0 chr2R 2058181 2058256 -19088452 - DNAREP1_DM LINE Penelope -5 589 514 1 600 21 36 0 0 chr2R 2059478 2059506 -19087202 + AT_rich Low_complexity Low_complexity 1 28 0 1 600 21 0 0 0 chr2R 2059540 2059561 -19087147 + AT_rich Low_complexity Low_complexity 1 21 0 1 600 267 31 0 0 chr2R 2059758 2059790 -19086918 + (CATA)n Simple_repeat Simple_repeat 1 32 0 1 600 1154 126 28 0 chr2R 2059881 2060095 -19086613 + DNAREP1_DM LINE Penelope 1 220 -374 1 600 254 188 23 23 chr2R 2060106 2060193 -19086515 - DNAREP1_DM LINE Penelope -329 265 179 1 600 78 0 0 0 chr2R 2064546 2064624 -19082084 + AT_rich Low_complexity Low_complexity 1 78 0 1 600 201 108 0 0 chr2R 2064637 2064674 -19082034 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 600 312 238 136 54 chr2R 2064690 2064916 -19081792 - DNAREP1_DM LINE Penelope -206 388 27 1 600 24 0 0 0 chr2R 2069257 2069281 -19077427 + AT_rich Low_complexity Low_complexity 1 24 0 1 600 21 0 0 0 chr2R 2074589 2074610 -19072098 + AT_rich Low_complexity Low_complexity 1 21 0 1 600 33 25 0 0 chr2R 2074638 2074678 -19072030 + AT_rich Low_complexity Low_complexity 1 40 0 1 600 22 35 0 0 chr2R 2075211 2075240 -19071468 + AT_rich Low_complexity Low_complexity 1 29 0 1 600 33 25 0 0 chr2R 2080048 2080088 -19066620 + AT_rich Low_complexity Low_complexity 1 40 0 1 600 423 83 0 0 chr2R 2082212 2082272 -19064436 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 600 31 0 0 0 chr2R 2084614 2084645 -19062063 + AT_rich Low_complexity Low_complexity 1 31 0 1 600 438 33 50 0 chr2R 2085786 2085846 -19060862 - DNAREP1_DM LINE Penelope 0 594 532 1 600 1642 80 59 0 chr2R 2085916 2086154 -19060554 + DNAREP1_DM LINE Penelope 343 594 0 1 600 474 169 0 0 chr2R 2086152 2086241 -19060467 - DNAREP1_DM LINE Penelope -505 89 1 1 600 21 36 0 0 chr2R 2086358 2086386 -19060322 + AT_rich Low_complexity Low_complexity 1 28 0 1 600 34 24 0 0 chr2R 2086686 2086727 -19059981 + AT_rich Low_complexity Low_complexity 1 41 0 1 600 261 234 90 13 chr2R 2087264 2087342 -19059366 + DNAREP1_DM LINE Penelope 362 445 -149 1 600 322 228 0 42 chr2R 2087361 2087457 -19059251 + DNAREP1_DM LINE Penelope 503 594 0 1 600 43 0 0 0 chr2R 2087768 2087811 -19058897 + AT_rich Low_complexity Low_complexity 1 43 0 1 600 291 85 0 0 chr2R 2091155 2091202 -19055506 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 600 24 0 0 0 chr2R 2092459 2092483 -19054225 + AT_rich Low_complexity Low_complexity 1 24 0 1 600 23 68 0 0 chr2R 2092658 2092702 -19054006 + AT_rich Low_complexity Low_complexity 1 44 0 1 600 21 57 0 0 chr2R 2094683 2094718 -19051990 + AT_rich Low_complexity Low_complexity 1 35 0 1 600 24 0 0 0 chr2R 2096115 2096139 -19050569 + AT_rich Low_complexity Low_complexity 1 24 0 1 600 258 200 18 0 chr2R 2096194 2096249 -19050459 + DNAREP1_DM LINE Penelope 389 444 -150 1 601 21 36 0 0 chr2R 2103363 2103391 -19043317 + AT_rich Low_complexity Low_complexity 1 28 0 1 601 384 212 0 0 chr2R 2105039 2105119 -19041589 + DNAREP1_DM LINE Penelope 1 80 -514 1 601 608 185 202 6 chr2R 2105117 2105280 -19041428 + DNAREP1_DM LINE Penelope 251 445 -149 1 601 296 89 22 0 chr2R 2105756 2105801 -19040907 + MARINA DNA Mariner 947 992 -275 1 601 392 205 17 25 chr2R 2105842 2105962 -19040746 + MARINA DNA Mariner 1149 1267 0 1 601 21 36 0 0 chr2R 2106431 2106459 -19040249 + AT_rich Low_complexity Low_complexity 1 28 0 1 601 253 228 0 0 chr2R 2110839 2110896 -19035812 + DNAREP1_DM LINE Penelope 6 62 -532 1 601 23 33 0 0 chr2R 2114819 2114849 -19031859 + AT_rich Low_complexity Low_complexity 1 30 0 1 601 269 217 0 0 chr2R 2114943 2115012 -19031696 + DNAREP1_DM LINE Penelope 525 593 -1 1 601 180 0 0 0 chr2R 2117342 2117362 -19029346 + (A)n Simple_repeat Simple_repeat 1 20 0 1 601 25 0 0 0 chr2R 2119664 2119689 -19027019 + AT_rich Low_complexity Low_complexity 1 25 0 1 601 274 159 14 68 chr2R 2121987 2122061 -19024647 - DNAREP1_DM LINE Penelope -89 505 436 1 601 282 256 0 0 chr2R 2123625 2123703 -19023005 + GA-rich Low_complexity Low_complexity 1 78 0 1 601 195 42 0 0 chr2R 2125754 2125778 -19020930 + (CAT)n Simple_repeat Simple_repeat 1 24 0 1 601 23 0 0 0 chr2R 2126418 2126441 -19020267 + AT_rich Low_complexity Low_complexity 1 23 0 1 601 200 200 0 0 chr2R 2126937 2126972 -19019736 + (TGG)n Simple_repeat Simple_repeat 2 36 0 1 601 203 270 0 13 chr2R 2127421 2127496 -19019212 + (TA)n Simple_repeat Simple_repeat 1 74 0 1 601 1211 171 99 36 chr2R 2128539 2128968 -19017740 - DNAREP1_DM LINE Penelope -21 573 4 1 601 276 115 173 0 chr2R 2129164 2129216 -19017492 + DNAREP1_DM LINE Penelope 534 594 0 1 601 21 57 0 0 chr2R 2130262 2130297 -19016411 + AT_rich Low_complexity Low_complexity 1 35 0 1 601 751 246 127 4 chr2R 2130762 2131007 -19015701 - DNAREP1_DM LINE Penelope -19 575 301 1 601 1428 115 211 40 chr2R 2131223 2131522 -19015186 + DNAREP1_DM LINE Penelope 245 594 0 1 601 311 185 15 44 chr2R 2131518 2131586 -19015122 + DNAREP1_DM LINE Penelope 3 68 -526 1 601 684 145 21 35 chr2R 2131626 2131769 -19014939 + DNAREP1_DM LINE Penelope 193 333 -261 1 601 25 31 0 0 chr2R 2131826 2131858 -19014850 + AT_rich Low_complexity Low_complexity 1 32 0 1 601 24 0 0 0 chr2R 2133564 2133588 -19013120 + AT_rich Low_complexity Low_complexity 1 24 0 1 601 334 217 0 0 chr2R 2137602 2137662 -19009046 - DNAREP1_DM LINE Penelope -104 490 431 1 601 243 246 0 0 chr2R 2137691 2137752 -19008956 - DNAREP1_DM LINE Penelope -236 358 298 1 601 1030 123 6 0 chr2R 2142001 2142163 -19004545 + DNAREP1_DM LINE Penelope 1 163 -431 1 601 369 80 0 0 chr2R 2142170 2142220 -19004488 + DNAREP1_DM LINE Penelope 500 549 -45 1 601 25 51 0 0 chr2R 2142309 2142348 -19004360 + AT_rich Low_complexity Low_complexity 1 39 0 1 601 971 255 34 0 chr2R 2142936 2143171 -19003537 - BS2 LINE Jockey -364 4357 4115 1 601 280 77 250 0 chr2R 2143171 2143223 -19003485 + DNAREP1_DM LINE Penelope 528 592 -2 1 601 415 41 0 0 chr2R 2143348 2143397 -19003311 - DNAREP1_DM LINE Penelope 0 594 546 1 601 551 105 133 0 chr2R 2143396 2143501 -19003207 - DNAREP1_DM LINE Penelope -439 155 37 1 601 751 176 24 24 chr2R 2143504 2143673 -19003035 + DNAREP1_DM LINE Penelope 88 256 -338 1 601 242 62 0 0 chr2R 2143677 2143709 -19002999 + DMRT1B LINE R1 190 221 -4962 1 601 1477 41 0 0 chr2R 2143722 2143892 -19002816 + BS3_DM LINE Jockey 472 641 -1149 1 601 343 67 0 0 chr2R 2143892 2143937 -19002771 + BS3_DM LINE Jockey 1181 1225 -565 1 601 8593 46 70 7 chr2R 2143942 2146213 -19000495 + DMCR1A LINE CR1 4 2416 -2054 1 601 690 13 0 0 chr2R 2146414 2146491 -19000217 + DMCR1A LINE CR1 2412 2488 -1982 1 601 8836 27 28 20 chr2R 2146491 2147587 -18999121 + PROTOP_A DNA P 1 1105 0 1 601 2274 76 127 0 chr2R 2147610 2147940 -18998768 - DMRT1B LINE R1 -3736 1447 1076 1 601 3439 123 16 4 chr2R 2147952 2148468 -18998240 - DMRT1B LINE R1 -4322 861 340 1 601 458 187 88 0 chr2R 2148468 2148559 -18998149 - DMRT1B LINE R1 -5084 99 1 1 601 3561 93 166 40 chr2R 2148773 2149491 -18997217 + I_DM LINE I 988 1795 -4436 1 601 28 0 0 0 chr2R 2149491 2149519 -18997189 + AT_rich Low_complexity Low_complexity 1 28 0 1 601 9255 0 0 0 chr2R 2149519 2150505 -18996203 - BS2 LINE Jockey 0 4721 3736 1 601 31931 5 0 0 chr2R 2150505 2153954 -18992754 - BS2 LINE Jockey -1266 3455 7 1 601 586 103 11 0 chr2R 2153960 2154047 -18992661 + I_DM LINE I 1780 1867 -4364 1 601 2174 112 0 12 chr2R 2154035 2154360 -18992348 + I_DM LINE I 3060 3380 -2851 1 601 1860 141 69 33 chr2R 2154365 2154784 -18991924 + I_DM LINE I 4127 4560 -1671 1 601 247 94 0 0 chr2R 2154777 2154809 -18991899 + I_DM LINE I 4726 4757 -1474 1 601 3408 208 35 53 chr2R 2154809 2155712 -18990996 + Gypsy12_LTR LTR Gypsy 3 889 -1447 1 601 3007 109 35 25 chr2R 2155726 2156243 -18990465 + I_DM LINE I 4787 5308 -923 1 601 1046 151 33 102 chr2R 2156251 2156495 -18990213 - DMLTR5 LTR Gypsy 0 266 40 1 601 806 157 57 28 chr2R 2156582 2156759 -18989949 + I_DM LINE I 5313 5494 -737 1 601 1554 207 52 34 chr2R 2156809 2157317 -18989391 - HOBO DNA hAT -943 2073 1436 1 601 451 36 0 0 chr2R 2157317 2157373 -18989335 - HOBO DNA hAT -1780 1236 1181 1 601 1601 93 10 76 chr2R 2157374 2157665 -18989043 + BATUMI_LTR LTR Pao 1 272 0 1 601 3925 48 18 8 chr2R 2157668 2158178 -18988530 + BATUMI_I LTR Pao 1 515 -7448 1 601 1984 114 42 0 chr2R 2158178 2158486 -18988222 + MAX_LTR LTR Pao 1 321 0 1 601 2656 77 74 43 chr2R 2158486 2158776 -18987932 + MAX_I LTR Pao 1 277 -7637 1 601 189 74 0 0 chr2R 2158776 2158803 -18987905 + (CATATA)n Simple_repeat Simple_repeat 1 27 0 1 601 2656 77 74 43 chr2R 2158803 2158918 -18987790 + MAX_I LTR Pao 278 419 -7495 1 601 514 68 0 39 chr2R 2158918 2158995 -18987713 + ROVER-LTR_DM LTR Gypsy 1 74 -293 1 601 1386 58 5 50 chr2R 2159126 2159326 -18987382 + ROVER-LTR_DM LTR Gypsy 177 367 0 1 601 262 173 8 126 chr2R 2159326 2159445 -18987263 + MAX_I LTR Pao 463 567 -7347 1 601 21 57 0 0 chr2R 2159486 2159521 -18987187 + AT_rich Low_complexity Low_complexity 1 35 0 1 601 57555 40 22 46 chr2R 2159697 2167239 -18979469 + MAX_I LTR Pao 557 7912 -2 1 601 2027 107 42 0 chr2R 2167247 2167555 -18979153 + MAX_LTR LTR Pao 1 321 0 1 601 1344 87 41 88 chr2R 2167555 2167874 -18978834 + BATUMI_I LTR Pao 499 801 -7162 1 601 2043 66 4 0 chr2R 2167868 2168126 -18978582 + BATUMI_I LTR Pao 3724 3982 -3981 1 601 12362 38 16 34 chr2R 2168125 2169726 -18976982 - BATUMI_I LTR Pao -5152 2811 1240 1 601 197 33 33 0 chr2R 2169726 2169756 -18976952 + (TATAA)n Simple_repeat Simple_repeat 5 35 0 1 601 1157 47 29 23 chr2R 2169773 2169946 -18976762 - BATUMI_I LTR Pao -7010 953 780 1 601 32322 77 73 43 chr2R 2169918 2174953 -18971755 + BATUMI_I LTR Pao 2776 7963 0 1 601 928 68 7 29 chr2R 2174959 2175096 -18971612 + BATUMI_I LTR Pao 7007 7140 -823 1 601 345 162 100 0 chr2R 2175096 2175176 -18971532 + DMRT1C LINE R1 4160 4247 -1196 1 601 790 167 144 0 chr2R 2175270 2175444 -18971264 - HOBO DNA hAT -1382 1634 1436 1 601 2589 118 53 22 chr2R 2175444 2175857 -18970851 - HOBO DNA hAT -1780 1236 811 1 601 380 91 18 0 chr2R 2175857 2175912 -18970796 - Rehavkus-1_DY DNA Tc1 0 5701 5647 1 601 2577 82 270 2 chr2R 2175906 2176358 -18970350 - NOF_FB DNA MuDR? -501 3846 3274 1 601 5335 126 170 27 chr2R 2176359 2178041 -18968667 - Rehavkus-1_DY DNA MuDR? -1397 4218 2286 1 601 2627 39 0 0 chr2R 2178057 2178363 -18968345 - DMRT1B LINE R1 -2859 2324 2019 1 601 475 0 0 0 chr2R 2178362 2178414 -18968294 - DMRT1B LINE R1 -3198 1985 1934 1 601 5322 54 18 0 chr2R 2178412 2179084 -18967624 - DMRT1B LINE R1 -3309 1874 1191 1 601 5754 137 38 0 chr2R 2179083 2179989 -18966719 + DMRT1B LINE R1 1662 2601 -2582 1 601 3334 112 68 18 chr2R 2180037 2180582 -18966126 + NOF_FB DNA MuDR? 1313 1884 -2463 1 601 4793 47 5 0 chr2R 2180579 2181669 -18965039 + DMRT1B LINE R1 2544 3738 -1445 1 601 372 0 0 0 chr2R 2181669 2181712 -18964996 + ROO_LTR LTR Pao 1 43 -385 1 601 18643 37 9 40 chr2R 2181714 2184173 -18962535 + ROO_I LTR Pao 33 2416 -5840 1 601 21850 0 0 0 chr2R 2184173 2186509 -18960199 - Gypsy12_LTR LTR Gypsy 0 2336 1 1 601 52286 0 0 0 chr2R 2186509 2192055 -18954653 - Gypsy12_I LTR Gypsy 0 5546 1 1 601 18966 4 0 18 chr2R 2192055 2194174 -18952534 - Gypsy12_LTR LTR Gypsy 0 2336 255 1 601 3746 27 75 0 chr2R 2194168 2194645 -18952063 + ROO_I LTR Pao 2826 3338 -4918 1 601 33532 22 18 3 chr2R 2194643 2199677 -18947031 - BS LINE Jockey -10 5116 5 1 601 2498 49 6 3 chr2R 2199670 2199995 -18946713 + ROO_I LTR Pao 3319 3644 -4612 1 601 43267 2 0 0 chr2R 2199990 2204682 -18942026 + FW_DM LINE Jockey 1 4692 0 1 601 2790 329 89 54 chr2R 2204689 2208130 -18938578 - Copia2_I LTR Copia -462 3700 140 1 601 2121 17 4 0 chr2R 2208197 2208433 -18938275 + ROO_LTR LTR Pao 192 428 0 1 601 5637 43 78 12 chr2R 2208434 2209698 -18937010 + DMRT1B LINE R1 3814 5160 -23 1 601 1253 73 170 0 chr2R 2209692 2210003 -18936705 + DMRT1C LINE R1 2189 2552 -2891 1 601 5124 72 139 10 chr2R 2209983 2210795 -18935913 + DMRT1C LINE R1 3331 4247 -1196 1 601 1038 198 14 11 chr2R 2210795 2211107 -18935601 - HOBO DNA hAT -1205 1811 1436 1 601 2473 120 63 22 chr2R 2211107 2211516 -18935192 - HOBO DNA hAT -1780 1236 811 1 601 380 91 18 0 chr2R 2211516 2211571 -18935137 - Rehavkus-1_DY DNA Tc1 0 5701 5647 1 601 873 62 53 0 chr2R 2211565 2211678 -18935030 - Rehavkus-1_DY DNA MuDR? -832 4783 4665 1 601 1539 118 289 6 chr2R 2211663 2212005 -18934703 - NOF_FB DNA MuDR? -635 3712 3274 1 601 687 172 89 117 chr2R 2212006 2212256 -18934452 - Rehavkus-1_DY DNA MuDR? -1397 4218 3975 1 601 4764 185 113 47 chr2R 2212256 2214394 -18932314 - Gypsy12_LTR LTR Gypsy 0 2280 1 1 601 578 89 133 0 chr2R 2214394 2214484 -18932224 - Rehavkus-1_DY DNA MuDR? -1637 3978 3877 1 601 502 88 0 0 chr2R 2214513 2214581 -18932127 - ROOA_LTR LTR Pao -83 303 236 1 601 5856 32 61 0 chr2R 2214587 2215307 -18931401 - ROOA_I LTR Pao -7 6842 6079 1 601 956 208 127 55 chr2R 2215336 2215769 -18930939 - ROOA_I LTR Pao -1164 5685 5222 1 601 14717 26 19 1 chr2R 2215765 2217468 -18929240 - ROOA_I LTR Pao -2247 4602 2869 1 601 2670 26 161 0 chr2R 2217480 2217829 -18928879 - ROOA_I LTR Pao -4052 2797 2393 1 601 3696 0 0 2 chr2R 2217848 2218251 -18928457 - STALKER4_LTR LTR Gypsy 0 402 1 1 601 45777 6 0 1 chr2R 2218251 2224794 -18921914 - STALKER4_I LTR Gypsy 0 6530 1 1 601 3616 0 0 2 chr2R 2224794 2225197 -18921511 - STALKER4_LTR LTR Gypsy 0 402 1 1 601 5921 29 61 1 chr2R 2225197 2225947 -18920761 - ROOA_I LTR Pao -4457 2392 1598 1 601 9913 30 29 16 chr2R 2225941 2227189 -18919519 - ROOA_I LTR Pao -5585 1264 1 1 601 1103 57 0 7 chr2R 2227189 2227331 -18919377 - ROOA_LTR LTR Pao 0 386 246 1 601 1335 126 5 0 chr2R 2227330 2227536 -18919172 - NOF_FB DNA MuDR? -2297 2050 1844 1 601 1420 100 56 0 chr2R 2227555 2227786 -18918922 - NOF_FB DNA MuDR? -2763 1584 1341 1 601 1225 131 38 14 chr2R 2227810 2228019 -18918689 - NOF_FB DNA MuDR? -3401 946 733 1 601 23 33 0 0 chr2R 2228032 2228062 -18918646 + AT_rich Low_complexity Low_complexity 1 30 0 1 602 473 329 15 15 chr2R 2228495 2228754 -18917954 - DM1731_I LTR Copia -3350 626 368 1 602 1304 106 82 0 chr2R 2228857 2229064 -18917644 - PROTOP DNA P -1665 2815 2592 1 602 1212 111 101 5 chr2R 2229059 2229276 -18917432 - PROTOP DNA P -3158 1322 1085 1 602 2659 94 131 14 chr2R 2229282 2229771 -18916937 + PROTOP_B DNA P 68 613 -540 1 602 224 185 31 0 chr2R 2230194 2230259 -18916449 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2230546 2230575 -18916133 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 208 200 31 0 chr2R 2230769 2230834 -18915874 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 224 185 31 0 chr2R 2231308 2231373 -18915335 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2231660 2231689 -18915019 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 208 200 31 0 chr2R 2231882 2231947 -18914761 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 21 36 0 0 chr2R 2232270 2232298 -18914410 + AT_rich Low_complexity Low_complexity 1 28 0 1 602 53 17 0 0 chr2R 2232473 2232533 -18914175 + AT_rich Low_complexity Low_complexity 1 60 0 1 602 224 185 31 0 chr2R 2232754 2232819 -18913889 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2233106 2233135 -18913573 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2233310 2233375 -18913333 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2233877 2233942 -18912766 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2234229 2234258 -18912450 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 2788 39 0 0 chr2R 2234453 2234789 -18911919 - DM1731_LTR LTR Copia 0 336 1 1 602 35674 6 1 1 chr2R 2234789 2238765 -18907943 - DM1731_I LTR Copia 0 3976 1 1 602 2788 39 0 0 chr2R 2238765 2239101 -18907607 - DM1731_LTR LTR Copia 0 336 1 1 602 208 200 31 0 chr2R 2239105 2239170 -18907538 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 224 185 31 0 chr2R 2239644 2239709 -18906999 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 208 200 31 0 chr2R 2240218 2240283 -18906425 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 21 36 0 0 chr2R 2240606 2240634 -18906074 + AT_rich Low_complexity Low_complexity 1 28 0 1 602 58 15 0 0 chr2R 2240808 2240873 -18905835 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 21 36 0 0 chr2R 2241215 2241243 -18905465 + AT_rich Low_complexity Low_complexity 1 28 0 1 602 53 17 0 0 chr2R 2241418 2241478 -18905230 + AT_rich Low_complexity Low_complexity 1 60 0 1 602 224 185 31 0 chr2R 2241961 2242026 -18904682 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2242313 2242342 -18904366 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 50 18 0 0 chr2R 2242517 2242574 -18904134 + AT_rich Low_complexity Low_complexity 1 57 0 1 602 224 185 31 0 chr2R 2243048 2243113 -18903595 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2243354 2243383 -18903325 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 208 200 31 0 chr2R 2243577 2243642 -18903066 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 208 200 31 0 chr2R 2244168 2244233 -18902475 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 220 141 46 15 chr2R 2244709 2244774 -18901934 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2245060 2245089 -18901619 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2245264 2245329 -18901379 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2245824 2245889 -18900819 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2246130 2246159 -18900549 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 208 200 31 0 chr2R 2246353 2246418 -18900290 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 0 0 0 chr2R 2246925 2246947 -18899761 + AT_rich Low_complexity Low_complexity 1 22 0 1 602 1364 304 63 36 chr2R 2247648 2249194 -18897514 + Copia2_I LTR Copia 521 2174 -1988 1 602 529 277 0 0 chr2R 2249243 2249398 -18897310 + Copia2_I LTR Copia 3911 4065 -97 1 602 208 200 31 0 chr2R 2249663 2249728 -18896980 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 220 141 46 15 chr2R 2250191 2250256 -18896452 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2250542 2250571 -18896137 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2250746 2250811 -18895897 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 22 35 0 0 chr2R 2251139 2251168 -18895540 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 208 200 31 0 chr2R 2251362 2251427 -18895281 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 224 185 31 0 chr2R 2251887 2251952 -18894756 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2252239 2252268 -18894440 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2252443 2252508 -18894200 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 62 26 0 0 chr2R 2252993 2253069 -18893639 + AT_rich Low_complexity Low_complexity 1 76 0 1 602 22 35 0 0 chr2R 2253362 2253391 -18893317 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 245 125 46 15 chr2R 2253585 2253650 -18893058 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 245 125 46 15 chr2R 2254181 2254246 -18892462 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 26 0 0 0 chr2R 2254560 2254586 -18892122 + AT_rich Low_complexity Low_complexity 1 26 0 1 602 35 24 0 0 chr2R 2254704 2254746 -18891962 + AT_rich Low_complexity Low_complexity 1 42 0 1 602 1597 5 21 0 chr2R 2254748 2254934 -18891774 - Copia2_LTR_DM LTR Copia 0 198 9 1 602 9352 10 0 0 chr2R 2254970 2256016 -18890692 - Copia2_I LTR Copia 0 4162 3117 1 602 22 35 0 0 chr2R 2256050 2256079 -18890629 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 58 15 0 0 chr2R 2256254 2256319 -18890389 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 220 141 46 15 chr2R 2256801 2256866 -18889842 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2257153 2257182 -18889526 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 58 15 0 0 chr2R 2257357 2257422 -18889286 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 22 35 0 0 chr2R 2257750 2257779 -18888929 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 22 35 0 0 chr2R 2258157 2258186 -18888522 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 229 141 46 15 chr2R 2258380 2258445 -18888263 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 224 185 31 0 chr2R 2258905 2258970 -18887738 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 51 31 0 0 chr2R 2259461 2259526 -18887182 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 62 26 0 0 chr2R 2260011 2260087 -18886621 + AT_rich Low_complexity Low_complexity 1 76 0 1 602 22 35 0 0 chr2R 2260380 2260409 -18886299 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 245 125 46 15 chr2R 2260603 2260668 -18886040 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 245 125 46 15 chr2R 2261199 2261264 -18885444 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 26 0 0 0 chr2R 2261578 2261604 -18885104 + AT_rich Low_complexity Low_complexity 1 26 0 1 602 35 24 0 0 chr2R 2261722 2261764 -18884944 + AT_rich Low_complexity Low_complexity 1 42 0 1 602 1597 5 21 0 chr2R 2261766 2261952 -18884756 - Copia2_LTR_DM LTR Copia 0 198 9 1 602 9352 10 0 0 chr2R 2261988 2263034 -18883674 - Copia2_I LTR Copia 0 4162 3117 1 602 22 35 0 0 chr2R 2263068 2263097 -18883611 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 58 15 0 0 chr2R 2263272 2263337 -18883371 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 220 141 46 15 chr2R 2263819 2263884 -18882824 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2264171 2264200 -18882508 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 58 15 0 0 chr2R 2264375 2264440 -18882268 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 22 35 0 0 chr2R 2264768 2264797 -18881911 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 58 15 0 0 chr2R 2264972 2265037 -18881671 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2265516 2265581 -18881127 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2265868 2265897 -18880811 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 220 141 46 15 chr2R 2266090 2266155 -18880553 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 224 185 31 0 chr2R 2266615 2266680 -18880028 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 58 15 0 0 chr2R 2267171 2267236 -18879472 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 58 15 0 0 chr2R 2267717 2267782 -18878926 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 220 141 46 15 chr2R 2268346 2268411 -18878297 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 208 200 31 0 chr2R 2268957 2269022 -18877686 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2269331 2269360 -18877348 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 208 200 31 0 chr2R 2269553 2269618 -18877090 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 8151 11 1 0 chr2R 2269831 2270741 -18875967 - Copia2_I LTR Copia -135 4027 3117 1 602 22 35 0 0 chr2R 2270775 2270804 -18875904 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2270979 2271044 -18875664 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 218 212 15 0 chr2R 2271523 2271589 -18875119 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 3769 7 5 0 chr2R 2271660 2272081 -18874627 + Invader1_LTR LTR Gypsy 1 423 0 1 602 19848 9 0 0 chr2R 2272081 2274274 -18872434 + Invader1_I LTR Gypsy 1 2193 -993 1 602 39406 4 0 0 chr2R 2274273 2278963 -18867745 - FW_DM LINE Jockey -2 4690 1 1 602 8335 11 5 2 chr2R 2278969 2279968 -18866740 + Invader1_I LTR Gypsy 2185 3186 0 1 602 3628 2 5 0 chr2R 2279968 2280389 -18866319 + Invader1_LTR LTR Gypsy 1 423 0 1 602 51 31 0 0 chr2R 2280813 2280878 -18865830 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 220 141 46 15 chr2R 2281372 2281437 -18865271 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2281724 2281753 -18864955 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2281928 2281993 -18864715 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2282487 2282552 -18864156 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2282778 2282807 -18863901 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2282983 2283048 -18863660 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2283542 2283607 -18863101 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2283833 2283862 -18862846 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2284038 2284103 -18862605 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2284597 2284662 -18862046 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2284888 2284917 -18861791 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2285093 2285158 -18861550 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 339 292 0 0 chr2R 2286370 2286476 -18860232 + FROGGER_I LTR Copia 567 672 -3490 1 602 3825 305 28 35 chr2R 2287245 2289835 -18856873 + FROGGER_I LTR Copia 420 4032 -130 1 602 220 141 46 15 chr2R 2290187 2290252 -18856456 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2290539 2290568 -18856140 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 58 15 0 0 chr2R 2290743 2290808 -18855900 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 47 33 0 0 chr2R 2291285 2291346 -18855362 + AT_rich Low_complexity Low_complexity 1 61 0 1 602 22 35 0 0 chr2R 2291638 2291667 -18855041 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2291843 2291908 -18854800 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2292402 2292467 -18854241 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2292753 2292782 -18853926 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2292958 2293023 -18853685 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2293517 2293582 -18853126 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2293808 2293837 -18852871 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2294013 2294078 -18852630 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2294572 2294637 -18852071 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2294923 2294952 -18851756 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2295128 2295193 -18851515 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 224 185 31 0 chr2R 2295687 2295752 -18850956 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2295978 2296007 -18850701 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2296183 2296248 -18850460 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 220 141 46 15 chr2R 2296742 2296807 -18849901 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2297094 2297123 -18849585 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 208 200 31 0 chr2R 2297318 2297383 -18849325 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 224 185 31 0 chr2R 2297858 2297923 -18848785 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 602 22 35 0 0 chr2R 2298209 2298238 -18848470 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 51 31 0 0 chr2R 2298414 2298479 -18848229 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 180 0 0 0 chr2R 2298593 2298613 -18848095 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 1 602 36190 0 0 0 chr2R 2298613 2302830 -18843878 - DOC6_DM LINE Jockey -4 4218 2 1 602 202 148 48 16 chr2R 2303221 2303283 -18843425 + (TTA)n Simple_repeat Simple_repeat 2 65 0 1 602 22 35 0 0 chr2R 2303572 2303601 -18843107 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 206 194 32 0 chr2R 2303795 2303857 -18842851 + (TTA)n Simple_repeat Simple_repeat 2 65 0 1 602 22 35 0 0 chr2R 2304936 2304965 -18841743 + AT_rich Low_complexity Low_complexity 1 29 0 1 602 58 15 0 0 chr2R 2305140 2305205 -18841503 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 35 24 0 0 chr2R 2305667 2305709 -18840999 + AT_rich Low_complexity Low_complexity 1 42 0 1 602 21 36 0 0 chr2R 2306037 2306065 -18840643 + AT_rich Low_complexity Low_complexity 1 28 0 1 602 58 15 0 0 chr2R 2306240 2306305 -18840403 + AT_rich Low_complexity Low_complexity 1 65 0 1 602 6347 18 64 15 chr2R 2306509 2307324 -18839384 + CIRCE LINE Composite 3517 4371 -1985 1 602 3455 0 0 0 chr2R 2310276 2310669 -18836039 + Invader6_LTR LTR Gypsy 1 393 0 1 602 36050 0 0 0 chr2R 2310669 2314768 -18831940 + Invader6_I LTR Gypsy 1 4099 0 1 602 2998 11 71 0 chr2R 2314768 2315135 -18831573 + Invader6_LTR LTR Gypsy 1 393 0 1 602 289 309 42 32 chr2R 2315137 2315354 -18831354 + BLASTOPIA_I LTR Gypsy 2206 2424 -2057 1 602 1149 29 0 0 chr2R 2315455 2315595 -18831113 + CIRCE LINE Composite 5430 5569 -787 1 602 6140 13 70 33 chr2R 2315589 2316400 -18830308 + CIRCE LINE Composite 130 970 -5386 1 602 30216 28 15 52 chr2R 2316535 2320695 -18826013 + CIRCE LINE Composite 973 4980 -1376 1 602 2216 318 40 40 chr2R 2320883 2323241 -18823467 - Invader4_I LTR Gypsy -1744 2355 1 1 602 294 302 32 23 chr2R 2323603 2323820 -18822888 - BLASTOPIA_I LTR Gypsy -1140 3341 3123 1 602 346 322 19 19 chr2R 2323826 2324032 -18822676 - BLASTOPIA_I LTR Gypsy -1649 2832 2627 1 602 259 220 0 0 chr2R 2326467 2326526 -18820182 - FROGGER_I LTR Copia -1847 230 172 1 602 2225 21 0 27 chr2R 2326734 2327027 -18819681 + BATUMI_I LTR Pao 7000 7284 -679 1 602 3621 94 73 105 chr2R 2327027 2327945 -18818763 + BATUMI_I LTR Pao 1 889 -7074 1 602 40 37 0 0 chr2R 2327945 2327999 -18818709 + AT_rich Low_complexity Low_complexity 1 54 0 1 602 1137 65 0 7 chr2R 2328016 2328170 -18818538 + BATUMI_I LTR Pao 1165 1317 -6646 1 602 33902 65 34 35 chr2R 2328220 2334301 -18812407 + BATUMI_I LTR Pao 1650 7963 0 1 602 2395 18 0 27 chr2R 2334301 2334592 -18812116 + BATUMI_I LTR Pao 7002 7284 -679 1 602 1634 83 4 40 chr2R 2336510 2336760 -18809948 - BATUMI_LTR LTR Pao 0 272 32 1 602 1594 286 53 40 chr2R 2336801 2337642 -18809066 + Copia_I LTR Copia 2810 3661 -932 1 602 1414 263 66 16 chr2R 2337690 2338177 -18808531 + Copia_I LTR Copia 3760 4270 -323 1 602 247 262 80 86 chr2R 2338224 2338399 -18808309 - Invader1_LTR LTR Gypsy -56 367 194 1 602 46309 2 2 0 chr2R 2338418 2343463 -18803245 + DMRT1A LINE R1 1 5054 -129 1 602 1648 46 0 0 chr2R 2343596 2343814 -18802894 - S_DM DNA Tc1 0 1736 1519 1 602 5107 30 129 0 chr2R 2343809 2344438 -18802270 - DMRT1B LINE R1 -671 4512 3803 1 602 24894 29 36 0 chr2R 2344438 2347295 -18799413 - DMRT1B LINE R1 -2078 3105 143 1 602 180 0 0 0 chr2R 2347295 2347315 -18799393 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 602 24894 139 71 31 chr2R 2347315 2347559 -18799149 - DMRT1B LINE R1 -4847 336 7 1 602 925 190 6 0 chr2R 2347657 2347819 -18798889 - Invader1_I LTR Gypsy -2992 194 32 1 602 324 186 65 65 chr2R 2347819 2347911 -18798797 + TABOR_LTR LTR Gypsy 1 92 -414 1 602 284 296 88 29 chr2R 2347865 2348001 -18798707 + T412LTR LTR LTR 42 185 -296 1 602 237 324 28 21 chr2R 2347896 2348041 -18798667 + Gypsy11_LTR LTR Gypsy 100 245 -207 1 602 312 216 13 13 chr2R 2348080 2348155 -18798553 + DM412B_LTR LTR Gypsy 235 309 -262 1 602 13329 63 15 2 chr2R 2348422 2350135 -18796573 - S_DM DNA Tc1 0 1736 1 1 602 390 187 115 36 chr2R 2350317 2350456 -18796252 + Copia_I LTR Copia 4347 4496 -97 1 602 5172 47 33 17 chr2R 2350576 2351274 -18795434 - PROTOP_B DNA P 0 1153 445 1 602 9043 35 18 2 chr2R 2351362 2352460 -18794248 + G4_DM LINE Jockey 1 1116 -2740 1 602 810 59 21 93 chr2R 2352461 2352600 -18794108 + G4_DM LINE Jockey 1523 1628 -2228 1 602 16359 15 15 0 chr2R 2352600 2354454 -18792254 + LOOPER1_DM DNA PiggyBac 1 1881 0 1 602 10487 30 55 2 chr2R 2354454 2356567 -18790141 + G4_DM LINE Jockey 1633 3856 0 1 602 1484 30 60 0 chr2R 2356578 2356778 -18789930 - PROTOP_B DNA P -743 410 199 1 602 2375 31 105 4 chr2R 2356780 2357244 -18789464 + TRANSIB1 DNA Transib 886 1397 -1617 1 602 2032 41 3 80 chr2R 2357244 2357533 -18789175 + MDG3_LTR LTR Gypsy 1 267 0 1 602 3743 17 0 0 chr2R 2357532 2357951 -18788757 + MDG3_I LTR Gypsy 1 419 -4567 1 602 917 71 95 0 chr2R 2357945 2358071 -18788637 + MDG3_I LTR Gypsy 527 664 -4322 1 602 2187 12 94 0 chr2R 2358069 2358323 -18788385 + MDG3_I LTR Gypsy 999 1276 -3710 1 602 2752 3 0 0 chr2R 2358323 2358621 -18788087 + Invader3_LTR LTR Gypsy 1 298 0 1 75 44550 2 9 1 chr2R 2358621 2363360 -18783348 + Invader3_I LTR Gypsy 1 4746 -142 1 603 218 32 32 0 chr2R 2363360 2363391 -18783317 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 603 44550 2 9 1 chr2R 2363391 2363502 -18783206 + Invader3_I LTR Gypsy 4747 4886 -2 1 603 2767 3 0 0 chr2R 2363502 2363800 -18782908 + Invader3_LTR LTR Gypsy 1 298 0 1 603 31414 18 14 1 chr2R 2363800 2367465 -18779243 + MDG3_I LTR Gypsy 1273 4986 0 1 603 2086 45 4 50 chr2R 2367465 2367745 -18778963 + MDG3_LTR LTR Gypsy 1 267 0 1 603 12758 34 31 2 chr2R 2367745 2369321 -18777387 + TRANSIB1 DNA Transib 1394 3014 0 1 603 550 309 50 45 chr2R 2369346 2369725 -18776983 + Invader1_I LTR Gypsy 1273 1653 -1533 1 603 482 319 30 22 chr2R 2369725 2369956 -18776752 + Invader1_I LTR Gypsy 1822 2054 -1132 1 603 3004 87 106 27 chr2R 2370811 2371294 -18775414 + CIRCE LINE Composite 3514 4034 -2322 1 603 5029 78 6 23 chr2R 2371302 2372008 -18774700 + CIRCE LINE Composite 4192 4885 -1471 1 603 795 41 0 0 chr2R 2372008 2372105 -18774603 + TRANSIB2 DNA Transib 1 97 -2747 1 603 12652 33 3 3 chr2R 2372102 2374181 -18772527 + TRANSIB2 DNA Transib 799 2844 0 1 603 22 0 0 0 chr2R 2374861 2374883 -18771825 + AT_rich Low_complexity Low_complexity 1 22 0 1 603 859 30 0 0 chr2R 2376138 2376238 -18770470 + PROTOP DNA P 2682 2781 -1699 1 603 18406 3 1 0 chr2R 2376353 2378391 -18768317 + G6_DM LINE Jockey 4 2042 0 1 603 180 0 0 0 chr2R 2378391 2378411 -18768297 + (A)n Simple_repeat Simple_repeat 1 20 0 1 603 4508 33 49 0 chr2R 2378785 2379337 -18767371 + PROTOP DNA P 2314 2892 -1588 1 603 3855 92 110 8 chr2R 2379337 2379965 -18766743 + PROTOP DNA P 3000 3691 -789 1 603 180 176 0 0 chr2R 2380103 2380137 -18766571 + (TATATG)n Simple_repeat Simple_repeat 5 38 0 1 603 22 56 0 0 chr2R 2381255 2381291 -18765417 + AT_rich Low_complexity Low_complexity 1 36 0 1 603 609 78 72 0 chr2R 2381487 2381653 -18765055 + (TA)n Simple_repeat Simple_repeat 2 179 0 1 603 43015 3 0 0 chr2R 2382091 2386783 -18759925 - FW_DM LINE Jockey 0 4692 1 1 603 24 0 0 0 chr2R 2386868 2386892 -18759816 + AT_rich Low_complexity Low_complexity 1 24 0 1 603 290 179 0 59 chr2R 2386911 2387103 -18759605 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 603 22 0 0 0 chr2R 2387149 2387171 -18759537 + AT_rich Low_complexity Low_complexity 1 22 0 1 603 43 0 0 0 chr2R 2388045 2388088 -18758620 + AT_rich Low_complexity Low_complexity 1 43 0 1 603 256 256 0 0 chr2R 2392566 2392644 -18754064 + T-rich Low_complexity Low_complexity 6 83 0 1 603 217 283 17 0 chr2R 2393412 2393472 -18753236 + (CAG)n Simple_repeat Simple_repeat 2 62 0 1 603 22 35 0 0 chr2R 2395442 2395471 -18751237 + AT_rich Low_complexity Low_complexity 1 29 0 1 603 26 30 0 0 chr2R 2395723 2395756 -18750952 + AT_rich Low_complexity Low_complexity 1 33 0 1 603 23 0 0 0 chr2R 2397784 2397807 -18748901 + AT_rich Low_complexity Low_complexity 1 23 0 1 603 23 0 0 0 chr2R 2397949 2397972 -18748736 + AT_rich Low_complexity Low_complexity 1 23 0 1 603 22 0 0 0 chr2R 2399576 2399598 -18747110 + AT_rich Low_complexity Low_complexity 1 22 0 1 603 207 0 0 0 chr2R 2405416 2405439 -18741269 + (TAAAAA)n Simple_repeat Simple_repeat 4 26 0 1 603 228 111 0 0 chr2R 2407682 2407718 -18738990 + (CAACT)n Simple_repeat Simple_repeat 3 38 0 1 603 243 61 0 0 chr2R 2412031 2412064 -18734644 + (ATG)n Simple_repeat Simple_repeat 1 33 0 1 603 1374 53 64 38 chr2R 2413811 2414046 -18732662 + Jockey2 LINE Jockey 3186 3426 -2 1 603 273 218 0 0 chr2R 2414051 2414106 -18732602 + DNAREP1_DM LINE Penelope 519 573 -21 1 603 189 0 0 0 chr2R 2418156 2418177 -18728531 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 1 603 25 0 0 0 chr2R 2422172 2422197 -18724511 + AT_rich Low_complexity Low_complexity 1 25 0 1 603 186 43 0 0 chr2R 2423094 2423117 -18723591 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 603 236 258 32 0 chr2R 2425535 2425597 -18721111 + (CAG)n Simple_repeat Simple_repeat 2 65 0 1 603 393 239 25 33 chr2R 2426494 2426615 -18720093 - DNAREP1_DM LINE Penelope -72 522 403 1 603 212 167 0 0 chr2R 2431637 2431679 -18715029 + GA-rich Low_complexity Low_complexity 3 44 0 1 603 227 300 0 0 chr2R 2434458 2434528 -18712180 + (CAGT)n Simple_repeat Simple_repeat 1 70 0 1 603 219 114 0 0 chr2R 2436470 2436505 -18710203 + (CAT)n Simple_repeat Simple_repeat 1 35 0 1 603 201 94 0 0 chr2R 2436600 2436632 -18710076 + (CCGAA)n Simple_repeat Simple_repeat 4 35 0 1 603 249 33 0 0 chr2R 2436767 2436797 -18709911 + (TCCA)n Simple_repeat Simple_repeat 2 31 0 1 603 274 234 155 8 chr2R 2437736 2437865 -18708843 + DNAREP1_DM LINE Penelope 1 148 -446 1 603 30 0 0 0 chr2R 2440174 2440204 -18706504 + AT_rich Low_complexity Low_complexity 1 30 0 1 603 270 81 0 0 chr2R 2440521 2440558 -18706150 + (CAT)n Simple_repeat Simple_repeat 3 39 0 1 603 258 206 0 0 chr2R 2440709 2440782 -18705926 + (CTCA)n Simple_repeat Simple_repeat 3 75 0 1 603 243 0 0 0 chr2R 2454080 2454107 -18692601 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 603 189 0 0 0 chr2R 2454857 2454878 -18691830 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 603 22 0 0 0 chr2R 2455633 2455655 -18691053 + AT_rich Low_complexity Low_complexity 1 22 0 1 603 198 167 0 0 chr2R 2456465 2456501 -18690207 + (TTTCG)n Simple_repeat Simple_repeat 2 37 0 1 603 674 216 131 92 chr2R 2457824 2458130 -18688578 - DNAREP1_DM LINE Penelope -41 553 236 1 603 22 0 0 0 chr2R 2458148 2458170 -18688538 + AT_rich Low_complexity Low_complexity 1 22 0 1 603 224 231 0 0 chr2R 2458653 2458705 -18688003 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 603 204 40 0 0 chr2R 2459689 2459714 -18686994 + (TTAAA)n Simple_repeat Simple_repeat 5 29 0 1 603 210 171 0 0 chr2R 2464368 2464409 -18682299 + (CCCGA)n Simple_repeat Simple_repeat 1 41 0 1 603 237 191 21 0 chr2R 2466973 2467020 -18679688 + DNAREP1_DM LINE Penelope 9 56 -538 1 603 265 89 22 22 chr2R 2467191 2467237 -18679471 - DNAREP1_DM LINE Penelope -547 47 2 1 603 2275 18 7 11 chr2R 2467332 2467608 -18679100 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 603 41499 1 1 0 chr2R 2467608 2472085 -18674623 + BLASTOPIA_I LTR Gypsy 1 4481 0 1 603 2275 18 7 11 chr2R 2472085 2472361 -18674347 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 603 215 213 0 0 chr2R 2473617 2473664 -18673044 + (CCA)n Simple_repeat Simple_repeat 3 49 0 1 603 202 323 0 0 chr2R 2480667 2480729 -18665979 + (TTCGGG)n Simple_repeat Simple_repeat 2 63 0 1 603 32 0 0 0 chr2R 2482843 2482875 -18663833 + AT_rich Low_complexity Low_complexity 1 32 0 1 603 204 97 0 0 chr2R 2483376 2483407 -18663301 + (TGAG)n Simple_repeat Simple_repeat 2 32 0 1 603 217 132 57 0 chr2R 2483747 2483800 -18662908 + (TTG)n Simple_repeat Simple_repeat 1 56 0 1 603 247 250 13 26 chr2R 2489879 2489957 -18656751 + (CAA)n Simple_repeat Simple_repeat 3 79 0 1 604 22 35 0 0 chr2R 2491327 2491356 -18655352 + AT_rich Low_complexity Low_complexity 1 29 0 1 604 234 91 0 0 chr2R 2493854 2493887 -18652821 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 604 265 190 95 60 chr2R 2494127 2494211 -18652497 - DNAREP1_DM LINE Penelope -83 511 425 1 604 24 0 0 0 chr2R 2494239 2494263 -18652445 + AT_rich Low_complexity Low_complexity 1 24 0 1 604 24 53 0 0 chr2R 2494508 2494546 -18652162 + AT_rich Low_complexity Low_complexity 1 38 0 1 604 22 0 0 0 chr2R 2496481 2496503 -18650205 + AT_rich Low_complexity Low_complexity 1 22 0 1 604 3215 121 70 28 chr2R 2496550 2497041 -18649667 + DNAREP1_DM LINE Penelope 1 481 -113 1 604 200 86 0 28 chr2R 2497041 2497077 -18649631 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 604 3215 121 70 28 chr2R 2497077 2497155 -18649553 + DNAREP1_DM LINE Penelope 482 593 -1 1 604 28 0 0 0 chr2R 2497807 2497835 -18648873 + AT_rich Low_complexity Low_complexity 1 28 0 1 604 3619 12 29 10 chr2R 2509704 2510119 -18636589 + Invader1_LTR LTR Gypsy 1 423 0 1 604 668 192 35 99 chr2R 2512241 2512443 -18634265 - DNAREP1_DM LINE Penelope 0 594 406 1 604 36 23 0 0 chr2R 2513647 2513690 -18633018 + AT_rich Low_complexity Low_complexity 1 43 0 1 604 206 81 54 0 chr2R 2513858 2513895 -18632813 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 604 48 60 0 0 chr2R 2513935 2514018 -18632690 + AT_rich Low_complexity Low_complexity 1 83 0 1 604 227 93 23 0 chr2R 2514038 2514081 -18632627 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 604 186 43 0 0 chr2R 2517477 2517500 -18629208 + (ATAAG)n Simple_repeat Simple_repeat 1 23 0 1 604 243 0 0 0 chr2R 2518422 2518449 -18628259 + (T)n Simple_repeat Simple_repeat 1 27 0 1 604 25 0 0 0 chr2R 2520788 2520813 -18625895 + AT_rich Low_complexity Low_complexity 1 25 0 1 604 21 0 0 0 chr2R 2524095 2524116 -18622592 + AT_rich Low_complexity Low_complexity 1 21 0 1 604 23 54 0 0 chr2R 2528513 2528550 -18618158 + AT_rich Low_complexity Low_complexity 1 37 0 1 604 23 0 0 0 chr2R 2528765 2528788 -18617920 + AT_rich Low_complexity Low_complexity 1 23 0 1 604 378 184 0 13 chr2R 2533937 2534014 -18612694 - DNAREP1_DM LINE Penelope -9 585 510 1 604 315 136 0 15 chr2R 2534055 2534122 -18612586 - DNAREP1_DM LINE Penelope -331 263 198 1 604 332 80 20 0 chr2R 2534157 2534207 -18612501 - DNAREP1_DM LINE Penelope -543 51 1 1 604 253 227 13 51 chr2R 2534961 2535040 -18611668 - DNAREP1_DM LINE Penelope -83 511 436 1 604 265 270 0 0 chr2R 2536563 2536652 -18610056 + (CTCCG)n Simple_repeat Simple_repeat 1 89 0 1 604 22 0 0 0 chr2R 2537922 2537944 -18608764 + AT_rich Low_complexity Low_complexity 1 22 0 1 604 30 27 0 0 chr2R 2544107 2544144 -18602564 + AT_rich Low_complexity Low_complexity 1 37 0 1 604 25 0 0 0 chr2R 2544473 2544498 -18602210 + AT_rich Low_complexity Low_complexity 1 25 0 1 604 221 240 0 0 chr2R 2546999 2547049 -18599659 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 604 12545 83 4 3 chr2R 2551738 2553473 -18593235 + S_DM DNA Tc1 1 1736 0 1 604 21 0 0 0 chr2R 2553932 2553953 -18592755 + AT_rich Low_complexity Low_complexity 1 21 0 1 604 21 57 0 0 chr2R 2556357 2556392 -18590316 + AT_rich Low_complexity Low_complexity 1 35 0 1 604 22 35 0 0 chr2R 2563193 2563222 -18583486 + AT_rich Low_complexity Low_complexity 1 29 0 1 604 22 35 0 0 chr2R 2564405 2564434 -18582274 + AT_rich Low_complexity Low_complexity 1 29 0 1 604 24 32 0 0 chr2R 2572238 2572269 -18574439 + AT_rich Low_complexity Low_complexity 1 31 0 1 604 21 36 0 0 chr2R 2576233 2576261 -18570447 + AT_rich Low_complexity Low_complexity 1 28 0 1 604 21 0 0 0 chr2R 2581385 2581406 -18565302 + AT_rich Low_complexity Low_complexity 1 21 0 1 604 33 80 0 0 chr2R 2585221 2585296 -18561412 + AT_rich Low_complexity Low_complexity 1 75 0 1 604 30 89 0 0 chr2R 2585374 2585453 -18561255 + AT_rich Low_complexity Low_complexity 1 79 0 1 604 27 62 0 0 chr2R 2586976 2587024 -18559684 + AT_rich Low_complexity Low_complexity 1 48 0 1 604 23 68 0 0 chr2R 2587423 2587467 -18559241 + AT_rich Low_complexity Low_complexity 1 44 0 1 604 23 0 0 0 chr2R 2588630 2588653 -18558055 + AT_rich Low_complexity Low_complexity 1 23 0 1 604 24 0 0 0 chr2R 2589276 2589300 -18557408 + AT_rich Low_complexity Low_complexity 1 24 0 1 604 240 288 0 0 chr2R 2593234 2593307 -18553401 + (CTG)n Simple_repeat Simple_repeat 1 73 0 1 604 24 53 0 0 chr2R 2594020 2594058 -18552650 + AT_rich Low_complexity Low_complexity 1 38 0 1 604 31 26 0 0 chr2R 2594460 2594498 -18552210 + AT_rich Low_complexity Low_complexity 1 38 0 1 604 864 159 160 25 chr2R 2597192 2597392 -18549316 - DNAREP1_DM LINE Penelope 0 594 368 1 604 420 250 0 0 chr2R 2597418 2597526 -18549182 - DNAREP1_DM LINE Penelope -486 108 1 1 604 21 0 0 0 chr2R 2601082 2601103 -18545605 + AT_rich Low_complexity Low_complexity 1 21 0 1 604 213 94 0 0 chr2R 2601387 2601419 -18545289 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 604 23 0 0 0 chr2R 2603796 2603819 -18542889 + AT_rich Low_complexity Low_complexity 1 23 0 1 604 27 73 0 0 chr2R 2605667 2605722 -18540986 + AT_rich Low_complexity Low_complexity 1 55 0 1 604 861 164 122 28 chr2R 2608180 2608394 -18538314 + DNAREP1_DM LINE Penelope 1 234 -360 1 604 330 70 0 0 chr2R 2608385 2608428 -18538280 + DNAREP1_DM LINE Penelope 129 171 -423 1 604 253 132 0 0 chr2R 2608428 2608466 -18538242 + DNAREP1_DM LINE Penelope 557 594 0 1 604 226 98 30 76 chr2R 2615616 2615682 -18531026 + (GTTTG)n Simple_repeat Simple_repeat 4 66 0 1 604 288 285 0 0 chr2R 2617969 2618148 -18528560 + (TCG)n Simple_repeat Simple_repeat 2 180 0 1 604 312 270 0 0 chr2R 2618197 2618334 -18528374 + (TCG)n Simple_repeat Simple_repeat 2 138 0 1 604 492 251 0 0 chr2R 2618336 2618573 -18528135 + (CAT)n Simple_repeat Simple_repeat 1 237 0 1 605 222 220 34 0 chr2R 2623727 2623786 -18522922 + (CATG)n Simple_repeat Simple_repeat 2 62 0 1 605 218 156 22 0 chr2R 2624083 2624128 -18522580 + (TATG)n Simple_repeat Simple_repeat 1 46 0 1 605 198 0 0 0 chr2R 2626976 2626998 -18519710 + (T)n Simple_repeat Simple_repeat 1 22 0 1 605 437 221 118 0 chr2R 2628612 2628739 -18517969 + DNAREP1_DM LINE Penelope 390 531 -63 1 605 391 192 57 66 chr2R 2634542 2634648 -18512060 - DNAREP1_DM LINE Penelope -85 509 405 1 605 21 36 0 0 chr2R 2634703 2634731 -18511977 + AT_rich Low_complexity Low_complexity 1 28 0 1 605 21 0 0 0 chr2R 2655150 2655171 -18491537 + AT_rich Low_complexity Low_complexity 1 21 0 1 605 21 36 0 0 chr2R 2655216 2655244 -18491464 + AT_rich Low_complexity Low_complexity 1 28 0 1 605 318 50 0 0 chr2R 2659944 2659984 -18486724 + (CAGTT)n Simple_repeat Simple_repeat 3 42 0 1 605 21 57 0 0 chr2R 2660925 2660960 -18485748 + AT_rich Low_complexity Low_complexity 1 35 0 1 605 186 171 0 0 chr2R 2664532 2664573 -18482135 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 605 208 276 0 0 chr2R 2665188 2665246 -18481462 + (CTG)n Simple_repeat Simple_repeat 1 58 0 1 605 257 121 31 94 chr2R 2666489 2666553 -18480155 - PENELOPE LINE Penelope -183 3978 3919 1 605 370 161 0 16 chr2R 2666578 2666641 -18480067 - DNAREP1_DM LINE Penelope -149 445 384 1 605 219 69 0 0 chr2R 2676446 2676475 -18470233 + (CCGAA)n Simple_repeat Simple_repeat 4 32 0 1 605 26 0 0 0 chr2R 2681368 2681394 -18465314 + AT_rich Low_complexity Low_complexity 1 26 0 1 605 25 51 0 0 chr2R 2683643 2683682 -18463026 + AT_rich Low_complexity Low_complexity 1 39 0 1 605 21 0 0 0 chr2R 2686831 2686852 -18459856 + AT_rich Low_complexity Low_complexity 1 21 0 1 605 30 27 0 0 chr2R 2686900 2686937 -18459771 + AT_rich Low_complexity Low_complexity 1 37 0 1 605 1050 16 0 0 chr2R 2687098 2687224 -18459484 + BS LINE Jockey 5001 5126 0 1 605 288 53 0 0 chr2R 2689148 2689186 -18457522 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 605 214 158 51 34 chr2R 2693223 2693282 -18453426 + (CATAC)n Simple_repeat Simple_repeat 2 61 0 1 605 225 0 0 0 chr2R 2693716 2693741 -18452967 + (TCTCG)n Simple_repeat Simple_repeat 1 25 0 1 605 401 73 18 0 chr2R 2694514 2694569 -18452139 + DNAREP1_DM LINE Penelope 1 56 -538 1 605 259 125 104 0 chr2R 2694699 2694747 -18451961 + DNAREP1_DM LINE Penelope 517 569 -25 1 605 25 31 0 0 chr2R 2694966 2694998 -18451710 + AT_rich Low_complexity Low_complexity 1 32 0 1 605 24 53 0 0 chr2R 2697505 2697543 -18449165 + AT_rich Low_complexity Low_complexity 1 38 0 1 605 26 30 0 0 chr2R 2698076 2698109 -18448599 + AT_rich Low_complexity Low_complexity 1 33 0 1 605 225 94 0 0 chr2R 2699311 2699343 -18447365 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 605 295 204 0 0 chr2R 2711696 2711750 -18434958 - DNAREP1_DM LINE Penelope -537 57 4 1 605 24 0 0 0 chr2R 2712528 2712552 -18434156 + AT_rich Low_complexity Low_complexity 1 24 0 1 605 21 0 0 0 chr2R 2714057 2714078 -18432630 + AT_rich Low_complexity Low_complexity 1 21 0 1 605 204 220 0 0 chr2R 2714769 2714819 -18431889 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 605 249 57 0 0 chr2R 2715759 2715794 -18430914 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 605 218 266 31 0 chr2R 2716291 2716355 -18430353 + (TTGGGG)n Simple_repeat Simple_repeat 4 69 0 1 605 207 294 0 0 chr2R 2721314 2721365 -18425343 + (ATGGTG)n Simple_repeat Simple_repeat 6 56 0 1 605 293 305 11 43 chr2R 2721511 2721696 -18425012 + (CAG)n Simple_repeat Simple_repeat 2 180 0 1 605 291 54 0 0 chr2R 2721965 2722002 -18424706 + (CAG)n Simple_repeat Simple_repeat 3 39 0 1 605 267 232 0 0 chr2R 2722276 2722358 -18424350 + (CGA)n Simple_repeat Simple_repeat 1 82 0 1 605 233 255 50 30 chr2R 2723383 2723484 -18423224 + ROO_I LTR Pao 641 743 -7513 1 605 213 65 0 0 chr2R 2724384 2724415 -18422293 + (CGAAT)n Simple_repeat Simple_repeat 1 31 0 1 605 186 43 0 0 chr2R 2726638 2726661 -18420047 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 605 222 128 0 0 chr2R 2727726 2727765 -18418943 + (GATTG)n Simple_repeat Simple_repeat 3 41 0 1 605 25 31 0 0 chr2R 2728692 2728724 -18417984 + AT_rich Low_complexity Low_complexity 1 32 0 1 605 215 83 0 104 chr2R 2730899 2730966 -18415742 + (TCCA)n Simple_repeat Simple_repeat 4 63 0 1 605 237 33 0 0 chr2R 2733859 2733889 -18412819 + (TAA)n Simple_repeat Simple_repeat 3 32 0 1 605 251 192 0 0 chr2R 2738202 2738254 -18408454 + C-rich Low_complexity Low_complexity 35 86 0 1 605 28 0 0 0 chr2R 2750368 2750396 -18396312 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 204 67 0 0 chr2R 2755665 2755695 -18391013 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 606 204 135 0 0 chr2R 2757600 2757637 -18389071 + (ATG)n Simple_repeat Simple_repeat 1 37 0 1 606 218 193 17 50 chr2R 2759711 2759771 -18386937 + (CACG)n Simple_repeat Simple_repeat 4 61 0 1 606 222 0 0 73 chr2R 2766676 2766717 -18379991 + (TAA)n Simple_repeat Simple_repeat 3 40 0 1 606 28 0 0 0 chr2R 2768962 2768990 -18377718 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 28 29 0 0 chr2R 2769220 2769255 -18377453 + AT_rich Low_complexity Low_complexity 1 35 0 1 606 31 26 0 0 chr2R 2772351 2772389 -18374319 + AT_rich Low_complexity Low_complexity 1 38 0 1 606 30 0 0 0 chr2R 2772631 2772661 -18374047 + AT_rich Low_complexity Low_complexity 1 30 0 1 606 222 118 0 0 chr2R 2781289 2781323 -18365385 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 606 208 279 0 0 chr2R 2786512 2786573 -18360135 + (CTG)n Simple_repeat Simple_repeat 3 63 0 1 606 36 23 0 0 chr2R 2789921 2789964 -18356744 + AT_rich Low_complexity Low_complexity 1 43 0 1 606 26 50 0 0 chr2R 2797036 2797076 -18349632 + AT_rich Low_complexity Low_complexity 1 40 0 1 606 21 0 0 0 chr2R 2801327 2801348 -18345360 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 203 196 17 35 chr2R 2801953 2802011 -18344697 + (GTTTG)n Simple_repeat Simple_repeat 2 58 0 1 606 21 57 0 0 chr2R 2802241 2802276 -18344432 + GC_rich Low_complexity Low_complexity 1 35 0 1 606 324 200 0 0 chr2R 2802682 2802737 -18343971 + DNAREP1_DM LINE Penelope 17 71 -523 1 606 897 188 176 19 chr2R 2802744 2803005 -18343703 + DNAREP1_DM LINE Penelope 293 594 0 1 606 22 35 0 0 chr2R 2808425 2808454 -18338254 + AT_rich Low_complexity Low_complexity 1 29 0 1 606 225 163 0 0 chr2R 2814829 2814878 -18331830 + (CAAAT)n Simple_repeat Simple_repeat 3 51 0 1 606 249 193 17 60 chr2R 2815200 2815316 -18331392 - ROO_I LTR Pao -7513 743 633 1 606 213 159 0 0 chr2R 2815371 2815415 -18331293 + (CTG)n Simple_repeat Simple_repeat 3 46 0 1 606 180 77 0 0 chr2R 2816117 2816143 -18330565 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 606 345 117 0 0 chr2R 2817340 2817400 -18329308 + (CTG)n Simple_repeat Simple_repeat 3 62 0 1 606 216 208 0 19 chr2R 2818512 2818566 -18328142 + A-rich Low_complexity Low_complexity 2 54 0 1 606 262 289 22 22 chr2R 2818724 2818816 -18327892 + (ATGGTG)n Simple_repeat Simple_repeat 1 92 0 1 606 277 242 0 0 chr2R 2819008 2819107 -18327601 - ROO_I LTR Pao -7513 743 645 1 606 257 160 0 107 chr2R 2820020 2820104 -18326604 - ROO_I LTR Pao -7519 737 663 1 606 200 196 0 0 chr2R 2820225 2820271 -18326437 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1 606 192 97 0 0 chr2R 2821378 2821409 -18325299 + (CTG)n Simple_repeat Simple_repeat 1 31 0 1 606 21 36 0 0 chr2R 2822096 2822124 -18324584 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 32 43 0 0 chr2R 2822249 2822295 -18324413 + AT_rich Low_complexity Low_complexity 1 46 0 1 606 25 0 0 0 chr2R 2828249 2828274 -18318434 + AT_rich Low_complexity Low_complexity 1 25 0 1 606 504 226 82 7 chr2R 2831842 2831989 -18314719 + DNAREP1_DM LINE Penelope 280 437 -157 1 606 29 0 0 0 chr2R 2832078 2832107 -18314601 + AT_rich Low_complexity Low_complexity 1 29 0 1 606 806 129 0 8 chr2R 2834624 2834757 -18311951 + DNAREP1_DM LINE Penelope 1 132 -462 1 606 424 73 0 0 chr2R 2834766 2834821 -18311887 + DNAREP1_DM LINE Penelope 511 565 -29 1 606 26 64 0 0 chr2R 2835192 2835239 -18311469 + AT_rich Low_complexity Low_complexity 1 47 0 1 606 28 91 0 0 chr2R 2835577 2835654 -18311054 + AT_rich Low_complexity Low_complexity 1 77 0 1 606 2199 128 84 21 chr2R 2835957 2836478 -18310230 + DNAREP1_DM LINE Penelope 1 594 0 1 606 200 182 0 35 chr2R 2838563 2838620 -18308088 + (TAAA)n Simple_repeat Simple_repeat 1 55 0 1 606 4806 6 0 0 chr2R 2839711 2840243 -18306465 + NOMAD_LTR LTR Gypsy 1 518 0 1 606 53220 0 14 1 chr2R 2840243 2846730 -18299978 + NOMAD_I LTR Gypsy 1 6572 0 1 606 4806 4 0 0 chr2R 2846730 2847248 -18299460 + NOMAD_LTR LTR Gypsy 1 518 0 1 606 333 167 0 0 chr2R 2852177 2852255 -18294453 + (TTG)n Simple_repeat Simple_repeat 1 78 0 1 606 204 40 0 0 chr2R 2852618 2852643 -18294065 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1 606 31 0 0 0 chr2R 2855427 2855458 -18291250 + AT_rich Low_complexity Low_complexity 1 31 0 1 606 21 57 0 0 chr2R 2856980 2857015 -18289693 + AT_rich Low_complexity Low_complexity 1 35 0 1 606 236 100 25 0 chr2R 2858736 2858776 -18287932 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 606 205 171 0 0 chr2R 2858788 2858823 -18287885 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 606 26 30 0 0 chr2R 2862651 2862684 -18284024 + AT_rich Low_complexity Low_complexity 1 33 0 1 606 27 0 0 0 chr2R 2863404 2863431 -18283277 + AT_rich Low_complexity Low_complexity 1 27 0 1 606 291 113 0 0 chr2R 2868258 2868311 -18278397 + (TCCA)n Simple_repeat Simple_repeat 4 56 0 1 606 11995 82 17 4 chr2R 2876619 2878278 -18268430 + FB4_DM DNA Tc1 1093 2772 -1317 1 607 190 0 67 0 chr2R 2896580 2896610 -18250098 + (TTA)n Simple_repeat Simple_repeat 1 32 0 1 607 23 33 0 0 chr2R 2896972 2897002 -18249706 + AT_rich Low_complexity Low_complexity 1 30 0 1 607 256 286 12 0 chr2R 2901255 2901339 -18245369 + (TA)n Simple_repeat Simple_repeat 1 85 0 1 607 195 69 0 0 chr2R 2902831 2902860 -18243848 + (CTATA)n Simple_repeat Simple_repeat 1 29 0 1 607 557 204 295 20 chr2R 2907195 2907494 -18239214 + DNAREP1_DM LINE Penelope 182 563 -31 1 607 26 0 0 0 chr2R 2908514 2908540 -18238168 + AT_rich Low_complexity Low_complexity 1 26 0 1 607 52 41 0 0 chr2R 2908637 2908710 -18237998 + AT_rich Low_complexity Low_complexity 1 73 0 1 607 246 105 132 0 chr2R 2908807 2908845 -18237863 - DNAREP1_DM LINE Penelope -541 53 11 1 607 208 122 0 47 chr2R 2909044 2909087 -18237621 + T-rich Low_complexity Low_complexity 3 43 0 1 607 23 0 0 0 chr2R 2910004 2910027 -18236681 + AT_rich Low_complexity Low_complexity 1 23 0 1 607 1326 137 202 30 chr2R 2910219 2910626 -18236082 - DNAREP1_DM LINE Penelope -115 479 3 1 607 284 98 0 0 chr2R 2910638 2910679 -18236029 + Gypsy12A_LTR LTR Gypsy 284 324 -1956 1 607 633 219 10 35 chr2R 2910667 2910866 -18235842 + Gypsy12A_LTR LTR Gypsy 771 964 -1316 1 607 22 35 0 0 chr2R 2912187 2912216 -18234492 + AT_rich Low_complexity Low_complexity 1 29 0 1 607 198 0 0 0 chr2R 2914163 2914185 -18232523 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 607 21 0 0 0 chr2R 2915761 2915782 -18230926 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 236 105 79 0 chr2R 2916140 2916178 -18230530 - P_DG DNA P -96 2792 2752 1 607 396 206 0 11 chr2R 2919484 2919577 -18227131 + DNAREP1_DM LINE Penelope 493 584 -10 1 607 22 0 0 0 chr2R 2919792 2919814 -18226894 + AT_rich Low_complexity Low_complexity 1 22 0 1 607 207 176 0 0 chr2R 2920930 2920964 -18225744 + (CCGGA)n Simple_repeat Simple_repeat 2 35 0 1 607 23 0 0 0 chr2R 2923205 2923228 -18223480 + AT_rich Low_complexity Low_complexity 1 23 0 1 607 21 0 0 0 chr2R 2928386 2928407 -18218301 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 298 222 0 0 chr2R 2934091 2934154 -18212554 - DNAREP1_DM LINE Penelope -104 490 428 1 607 1202 106 71 9 chr2R 2934308 2934611 -18212097 - DNAREP1_DM LINE Penelope -136 458 20 1 607 192 125 0 0 chr2R 2948995 2949027 -18197681 + (CAATC)n Simple_repeat Simple_repeat 5 36 0 1 607 27 49 0 0 chr2R 2952528 2952569 -18194139 + AT_rich Low_complexity Low_complexity 1 41 0 1 607 21 36 0 0 chr2R 2953595 2953623 -18193085 + AT_rich Low_complexity Low_complexity 1 28 0 1 607 198 0 0 0 chr2R 2957964 2957986 -18188722 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1 607 258 160 0 0 chr2R 2968122 2968172 -18178536 + (GAGTG)n Simple_repeat Simple_repeat 3 52 0 1 607 24 0 0 0 chr2R 2968669 2968693 -18178015 + AT_rich Low_complexity Low_complexity 1 24 0 1 607 195 167 0 0 chr2R 2974958 2975000 -18171708 + (CATAC)n Simple_repeat Simple_repeat 5 46 0 1 607 26 0 0 0 chr2R 2987059 2987085 -18159623 + AT_rich Low_complexity Low_complexity 1 26 0 1 607 300 191 357 0 chr2R 2989557 2989641 -18157067 - DNAREP1_DM LINE Penelope -50 544 431 1 607 180 77 0 0 chr2R 3000940 3000966 -18145742 + (T)n Simple_repeat Simple_repeat 1 26 0 1 607 207 167 0 0 chr2R 3004541 3004577 -18142131 + (ATCTG)n Simple_repeat Simple_repeat 1 36 0 1 607 21 0 0 0 chr2R 3007604 3007625 -18139083 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 298 196 0 0 chr2R 3015445 3015501 -18131207 - DNAREP1_DM LINE Penelope -532 62 7 1 608 207 0 0 0 chr2R 3021101 3021124 -18125584 + (CATA)n Simple_repeat Simple_repeat 1 23 0 1 608 225 0 0 0 chr2R 3025668 3025693 -18121015 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 608 12788 7 1 0 chr2R 3027482 3028916 -18117792 + M4DM DNA Transib 1 1435 0 1 608 225 0 0 0 chr2R 3029130 3029155 -18117553 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 608 201 261 14 28 chr2R 3029285 3029356 -18117352 + (CTG)n Simple_repeat Simple_repeat 1 70 0 1 608 212 167 0 0 chr2R 3029868 3029904 -18116804 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1 608 22 0 0 0 chr2R 3030378 3030400 -18116308 + AT_rich Low_complexity Low_complexity 1 22 0 1 608 267 161 0 0 chr2R 3030978 3031034 -18115674 + (TTG)n Simple_repeat Simple_repeat 1 56 0 1 608 32 43 0 0 chr2R 3034907 3034953 -18111755 + AT_rich Low_complexity Low_complexity 1 46 0 1 608 226 178 0 61 chr2R 3038259 3038325 -18108383 + (CGGAA)n Simple_repeat Simple_repeat 3 64 0 1 608 300 165 76 0 chr2R 3045422 3045501 -18101207 - ROO_I LTR Pao -7521 735 651 1 608 198 160 0 0 chr2R 3048459 3048509 -18098199 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 608 500 249 41 6 chr2R 3051353 3051526 -18095182 + DNAREP1_DM LINE Penelope 1 124 -470 1 608 209 329 0 12 chr2R 3053511 3053597 -18093111 + (CAG)n Simple_repeat Simple_repeat 2 86 0 1 608 207 0 0 0 chr2R 3055102 3055125 -18091583 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 608 218 293 0 0 chr2R 3060184 3060242 -18086466 + (CAA)n Simple_repeat Simple_repeat 1 58 0 1 608 345 187 0 0 chr2R 3061798 3061873 -18084835 + (TCCG)n Simple_repeat Simple_repeat 2 76 0 1 608 183 139 0 0 chr2R 3062272 3062308 -18084400 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 608 205 288 0 0 chr2R 3068309 3068368 -18078340 + (TCCG)n Simple_repeat Simple_repeat 4 62 0 1 608 211 216 0 0 chr2R 3070525 3070576 -18076132 + A-rich Low_complexity Low_complexity 1 51 0 1 608 192 40 0 0 chr2R 3075877 3075902 -18070806 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 608 195 42 0 0 chr2R 3076354 3076378 -18070330 + (CTAA)n Simple_repeat Simple_repeat 3 26 0 1 608 205 244 0 0 chr2R 3079321 3079366 -18067342 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 1 608 27 29 0 0 chr2R 3082195 3082229 -18064479 + AT_rich Low_complexity Low_complexity 1 34 0 1 608 27 0 0 0 chr2R 3082338 3082365 -18064343 + AT_rich Low_complexity Low_complexity 1 27 0 1 608 43121 3 0 0 chr2R 3084133 3088827 -18057881 - FW_DM LINE Jockey 0 4692 1 1 608 21 0 0 0 chr2R 3090873 3090894 -18055814 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 29 0 0 0 chr2R 3095745 3095774 -18050934 + AT_rich Low_complexity Low_complexity 1 29 0 1 608 200 143 24 0 chr2R 3095967 3096009 -18050699 + (CAA)n Simple_repeat Simple_repeat 3 45 0 1 608 406 175 426 14 chr2R 3097200 3097348 -18049360 - DNAREP1_DM LINE Penelope -8 586 378 1 608 3928 5 0 2 chr2R 3097400 3097829 -18048879 - ROO_LTR LTR Pao 0 428 1 1 608 10862 2 10 0 chr2R 3097829 3099044 -18047664 - ROO_I LTR Pao 0 8256 7030 1 608 49889 1 27 0 chr2R 3099032 3104661 -18042047 - ROO_I LTR Pao -2475 5781 1 1 608 3938 5 0 2 chr2R 3104661 3105090 -18041618 - ROO_LTR LTR Pao 0 428 1 1 608 260 289 0 0 chr2R 3106693 3106769 -18039939 + (CCCCAA)n Simple_repeat Simple_repeat 1 76 0 1 608 186 71 0 0 chr2R 3112626 3112654 -18034054 + (CACCAT)n Simple_repeat Simple_repeat 3 30 0 1 608 315 0 0 0 chr2R 3112843 3112878 -18033830 + (GAGTG)n Simple_repeat Simple_repeat 3 37 0 1 608 249 83 0 0 chr2R 3119987 3120023 -18026685 + (CAG)n Simple_repeat Simple_repeat 1 36 0 1 608 46533 7 0 0 chr2R 3123379 3128393 -18018315 + LINEJ1_DM LINE Jockey 7 5020 0 1 608 22 56 0 0 chr2R 3133476 3133512 -18013196 + AT_rich Low_complexity Low_complexity 1 36 0 1 608 200 216 0 0 chr2R 3135319 3135356 -18011352 + (CATATA)n Simple_repeat Simple_repeat 5 41 0 1 608 205 176 0 0 chr2R 3135622 3135656 -18011052 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 608 207 100 0 0 chr2R 3141916 3141946 -18004762 + (CATA)n Simple_repeat Simple_repeat 2 31 0 1 608 22 0 0 0 chr2R 3142704 3142726 -18003982 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 3591 5 7 7 chr2R 3149746 3150160 -17996548 - DM297_LTR LTR Gypsy 0 414 1 1 609 53994 7 0 0 chr2R 3150160 3156328 -17990380 - DM297_I LTR Gypsy 0 6167 1 1 609 3583 5 7 7 chr2R 3156328 3156741 -17989967 - DM297_LTR LTR Gypsy 0 414 2 1 609 198 0 0 0 chr2R 3156741 3156763 -17989945 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 609 354 23 0 0 chr2R 3159994 3160037 -17986671 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1 609 186 43 0 0 chr2R 3170398 3170421 -17976287 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 609 198 206 0 0 chr2R 3184869 3184932 -17961776 + (CCA)n Simple_repeat Simple_repeat 2 64 0 1 609 186 43 0 0 chr2R 3185482 3185505 -17961203 + (TGG)n Simple_repeat Simple_repeat 3 25 0 1 609 413 207 0 44 chr2R 3188750 3188841 -17957867 - DNAREP1_DM LINE Penelope -113 481 395 1 609 22 0 0 0 chr2R 3189250 3189272 -17957436 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 28 0 0 0 chr2R 3189664 3189692 -17957016 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 1416 239 38 66 chr2R 3193499 3194014 -17952694 + DNAREP1_DM LINE Penelope 77 567 -27 1 609 281 68 23 0 chr2R 3197143 3197187 -17949521 + (TTA)n Simple_repeat Simple_repeat 3 47 0 1 609 216 86 0 94 chr2R 3198601 3198665 -17948043 + (CTTTG)n Simple_repeat Simple_repeat 2 59 0 1 609 319 309 0 0 chr2R 3200137 3200260 -17946448 + GA-rich Low_complexity Low_complexity 2 124 0 1 609 249 139 0 0 chr2R 3201325 3201368 -17945340 + (ATG)n Simple_repeat Simple_repeat 1 43 0 1 609 208 135 0 0 chr2R 3202576 3202613 -17944095 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 1 609 268 132 0 0 chr2R 3203590 3203628 -17943080 + DNAREP1_DM LINE Penelope 21 58 -536 1 609 403 39 0 0 chr2R 3205332 3205383 -17941325 + G5_DM LINE Jockey 4799 4849 -7 1 609 194 105 26 0 chr2R 3206284 3206322 -17940386 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 1 609 201 167 0 0 chr2R 3206612 3206648 -17940060 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 609 189 0 0 0 chr2R 3212800 3212821 -17933887 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 609 228 35 0 0 chr2R 3214390 3214419 -17932289 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 609 21 36 0 0 chr2R 3233299 3233327 -17913381 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 38 68 0 0 chr2R 3248476 3248549 -17898159 + AT_rich Low_complexity Low_complexity 1 73 0 1 609 212 250 0 14 chr2R 3250297 3250366 -17896342 + GA-rich Low_complexity Low_complexity 2 69 0 1 609 52 41 0 0 chr2R 3255722 3255795 -17890913 + AT_rich Low_complexity Low_complexity 1 73 0 1 609 35 24 0 0 chr2R 3257178 3257220 -17889488 + AT_rich Low_complexity Low_complexity 1 42 0 1 609 31 0 0 0 chr2R 3257581 3257612 -17889096 + AT_rich Low_complexity Low_complexity 1 31 0 1 609 232 191 0 0 chr2R 3264767 3264809 -17881899 - DNAREP1_DM LINE Penelope -539 55 14 1 609 280 156 0 0 chr2R 3264850 3264895 -17881813 - DNAREP1_DM LINE Penelope -535 59 15 1 609 21 71 0 0 chr2R 3267761 3267803 -17878905 + AT_rich Low_complexity Low_complexity 1 42 0 1 609 202 217 0 0 chr2R 3268382 3268428 -17878280 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 609 203 156 0 0 chr2R 3269456 3269488 -17877220 + CT-rich Low_complexity Low_complexity 2 33 0 1 610 3560 57 0 2 chr2R 3281652 3282088 -17864620 + Mariner2_DM DNA Tc1 1 435 -477 1 610 999 86 7 28 chr2R 3282292 3282436 -17864272 + Mariner2_DM DNA Tc1 450 590 -322 1 610 1475 47 0 21 chr2R 3282441 3282635 -17864073 + Mariner2_DM DNA Tc1 723 912 0 1 610 2270 109 129 22 chr2R 3283794 3284198 -17862510 - DNAREP1_DM LINE Penelope 0 594 148 1 610 23 0 0 0 chr2R 3284429 3284452 -17862256 + AT_rich Low_complexity Low_complexity 1 23 0 1 610 26 64 0 0 chr2R 3285043 3285090 -17861618 + AT_rich Low_complexity Low_complexity 1 47 0 1 610 24 0 0 0 chr2R 3285698 3285722 -17860986 + AT_rich Low_complexity Low_complexity 1 24 0 1 610 221 234 0 15 chr2R 3285996 3286061 -17860647 + (CTG)n Simple_repeat Simple_repeat 3 66 0 1 610 225 119 0 0 chr2R 3286158 3286200 -17860508 + (CTG)n Simple_repeat Simple_repeat 1 42 0 1 610 267 140 0 0 chr2R 3290708 3290758 -17855950 + (CCA)n Simple_repeat Simple_repeat 3 52 0 1 610 203 158 0 0 chr2R 3290787 3290825 -17855883 + (CAA)n Simple_repeat Simple_repeat 3 40 0 1 610 228 67 0 0 chr2R 3294626 3294656 -17852052 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 610 25 31 0 0 chr2R 3295532 3295564 -17851144 + AT_rich Low_complexity Low_complexity 1 32 0 1 610 21 0 0 0 chr2R 3295847 3295868 -17850840 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 391 143 144 62 chr2R 3295940 3296037 -17850671 - DNAREP1_DM LINE Penelope -69 525 421 1 610 28 0 0 0 chr2R 3296085 3296113 -17850595 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 26 30 0 0 chr2R 3297011 3297044 -17849664 + AT_rich Low_complexity Low_complexity 1 33 0 1 610 21 0 0 0 chr2R 3304106 3304127 -17842581 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 228 43 65 0 chr2R 3305447 3305493 -17841215 + (CATTA)n Simple_repeat Simple_repeat 3 51 0 1 610 252 0 0 0 chr2R 3306146 3306174 -17840534 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 610 216 0 0 0 chr2R 3306332 3306356 -17840352 + (CTTAA)n Simple_repeat Simple_repeat 1 24 0 1 610 200 86 0 28 chr2R 3306458 3306494 -17840214 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 1 610 25 0 0 0 chr2R 3309963 3309988 -17836720 + AT_rich Low_complexity Low_complexity 1 25 0 1 610 273 146 0 0 chr2R 3311956 3312004 -17834704 + (CAA)n Simple_repeat Simple_repeat 3 50 0 1 610 241 323 0 0 chr2R 3312026 3312119 -17834589 + (CGG)n Simple_repeat Simple_repeat 1 93 0 1 610 23 33 0 0 chr2R 3314232 3314262 -17832446 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 222 268 0 0 chr2R 3315096 3315152 -17831556 + CT-rich Low_complexity Low_complexity 5 60 0 1 610 282 304 0 0 chr2R 3316771 3316863 -17829845 + (CCCCAG)n Simple_repeat Simple_repeat 2 93 0 1 610 180 77 0 0 chr2R 3319484 3319510 -17827198 + (CGGAA)n Simple_repeat Simple_repeat 2 27 0 1 610 261 57 0 0 chr2R 3319607 3319642 -17827066 + (TCC)n Simple_repeat Simple_repeat 1 35 0 1 610 250 207 22 22 chr2R 3321304 3321393 -17825315 + ROO_I LTR Pao 641 729 -7527 1 610 190 200 0 51 chr2R 3321693 3321772 -17824936 + (CAG)n Simple_repeat Simple_repeat 1 75 0 1 610 22 56 0 0 chr2R 3322334 3322370 -17824338 + AT_rich Low_complexity Low_complexity 1 36 0 1 610 38527 1 0 0 chr2R 3322465 3326687 -17820021 - DOC6_DM LINE Jockey 0 4222 1 1 610 23 0 0 0 chr2R 3326694 3326717 -17819991 + AT_rich Low_complexity Low_complexity 1 23 0 1 610 24 0 0 0 chr2R 3327930 3327954 -17818754 + AT_rich Low_complexity Low_complexity 1 24 0 1 610 31 0 0 0 chr2R 3333326 3333357 -17813351 + AT_rich Low_complexity Low_complexity 1 31 0 1 610 21 0 0 0 chr2R 3334770 3334791 -17811917 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 245 51 26 0 chr2R 3334806 3334845 -17811863 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 1 610 22 99 0 0 chr2R 3336168 3336239 -17810469 + AT_rich Low_complexity Low_complexity 1 71 0 1 610 827 211 67 31 chr2R 3340983 3341208 -17805500 + DNAREP1_DM LINE Penelope 233 465 -129 1 610 32 26 0 0 chr2R 3341227 3341266 -17805442 + AT_rich Low_complexity Low_complexity 1 39 0 1 610 478 149 334 27 chr2R 3341333 3341470 -17805238 + DNAREP1_DM LINE Penelope 416 594 0 1 610 615 180 23 30 chr2R 3346945 3347077 -17799631 - DNAREP1_DM LINE Penelope -97 497 367 1 610 615 230 19 0 chr2R 3347076 3347237 -17799471 - DNAREP1_DM LINE Penelope -430 164 1 1 610 22 0 0 0 chr2R 3349878 3349900 -17796808 + AT_rich Low_complexity Low_complexity 1 22 0 1 610 351 44 0 0 chr2R 3358439 3358484 -17788224 + (ATG)n Simple_repeat Simple_repeat 1 45 0 1 610 27 0 0 0 chr2R 3360491 3360518 -17786190 + AT_rich Low_complexity Low_complexity 1 27 0 1 610 25 31 0 0 chr2R 3366399 3366431 -17780277 + AT_rich Low_complexity Low_complexity 1 32 0 1 610 234 207 0 0 chr2R 3366492 3366550 -17780158 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 610 201 39 0 0 chr2R 3367352 3367378 -17779330 + (TATG)n Simple_repeat Simple_repeat 1 26 0 1 610 273 29 0 0 chr2R 3367589 3367623 -17779085 + (T)n Simple_repeat Simple_repeat 1 34 0 1 610 204 111 0 0 chr2R 3368384 3368420 -17778288 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1 610 180 77 0 0 chr2R 3369373 3369399 -17777309 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1 610 207 0 0 0 chr2R 3369738 3369761 -17776947 + (TGGA)n Simple_repeat Simple_repeat 1 23 0 1 610 185 108 0 26 chr2R 3370545 3370583 -17776125 + (TTTTTG)n Simple_repeat Simple_repeat 5 41 0 1 610 205 269 0 0 chr2R 3370615 3370667 -17776041 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 1 610 218 243 0 67 chr2R 3375419 3375494 -17771214 + GA-rich Low_complexity Low_complexity 5 74 0 1 610 192 97 0 0 chr2R 3375600 3375631 -17771077 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 610 240 59 0 0 chr2R 3376244 3376278 -17770430 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 610 22 80 0 0 chr2R 3377527 3377577 -17769131 + AT_rich Low_complexity Low_complexity 1 50 0 1 610 22 0 0 0 chr2R 3377651 3377673 -17769035 + AT_rich Low_complexity Low_complexity 1 22 0 1 610 217 304 0 0 chr2R 3379595 3379664 -17767044 + (CGG)n Simple_repeat Simple_repeat 2 70 0 1 610 270 95 0 0 chr2R 3380021 3380063 -17766645 + (GAA)n Simple_repeat Simple_repeat 2 43 0 1 610 202 189 0 0 chr2R 3381832 3381869 -17764839 + (ATGGTG)n Simple_repeat Simple_repeat 4 40 0 1 610 21 71 0 0 chr2R 3384082 3384124 -17762584 + AT_rich Low_complexity Low_complexity 1 42 0 1 610 27 0 0 0 chr2R 3384426 3384453 -17762255 + AT_rich Low_complexity Low_complexity 1 27 0 1 610 243 0 0 0 chr2R 3388135 3388162 -17758546 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 610 21 0 0 0 chr2R 3390909 3390930 -17755778 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 30 27 0 0 chr2R 3400433 3400470 -17746238 + AT_rich Low_complexity Low_complexity 1 37 0 1 610 287 211 0 0 chr2R 3400546 3400598 -17746110 + DNAREP1_DM LINE Penelope 20 71 -523 1 610 782 112 101 36 chr2R 3400601 3400740 -17745968 + DNAREP1_DM LINE Penelope 425 572 -22 1 610 1239 217 27 60 chr2R 3400743 3401366 -17745342 - PROTOP_A DNA P -1 1152 579 1 610 522 190 198 0 chr2R 3401398 3401519 -17745189 - PROTOP_B DNA P -1005 148 4 1 610 24 32 0 0 chr2R 3403917 3403948 -17742760 + AT_rich Low_complexity Low_complexity 1 31 0 1 610 426 189 135 45 chr2R 3404138 3404271 -17742437 + DNAREP1_DM LINE Penelope 76 315 -279 1 610 30 83 0 0 chr2R 3406493 3406565 -17740143 + AT_rich Low_complexity Low_complexity 1 72 0 1 610 23 0 0 0 chr2R 3406667 3406690 -17740018 + AT_rich Low_complexity Low_complexity 1 23 0 1 611 21 71 0 0 chr2R 3416262 3416304 -17730404 + AT_rich Low_complexity Low_complexity 1 42 0 1 611 180 125 0 0 chr2R 3416612 3416644 -17730064 + (T)n Simple_repeat Simple_repeat 1 32 0 1 611 207 232 0 0 chr2R 3418714 3418770 -17727938 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 611 23 0 0 0 chr2R 3420879 3420902 -17725806 + AT_rich Low_complexity Low_complexity 1 23 0 1 611 198 0 0 0 chr2R 3428162 3428184 -17718524 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 611 28 0 0 0 chr2R 3429383 3429411 -17717297 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 295 160 0 39 chr2R 3430346 3430398 -17716310 + DNAREP1_DM LINE Penelope 2 51 -543 1 611 29 28 0 0 chr2R 3432295 3432331 -17714377 + AT_rich Low_complexity Low_complexity 1 36 0 1 611 253 218 0 0 chr2R 3433348 3433403 -17713305 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 611 236 257 0 9 chr2R 3433611 3433725 -17712983 + (CAA)n Simple_repeat Simple_repeat 3 115 0 1 611 208 235 0 0 chr2R 3434700 3434751 -17711957 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 611 236 236 0 0 chr2R 3437749 3437804 -17708904 + (ACTG)n Simple_repeat Simple_repeat 1 55 0 1 611 469 190 405 20 chr2R 3438203 3438401 -17708307 - DMRP1 Unknown Unknown -69 277 3 1 611 24 0 0 0 chr2R 3444134 3444158 -17702550 + AT_rich Low_complexity Low_complexity 1 24 0 1 611 393 22 0 0 chr2R 3450297 3450343 -17696365 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 611 23 54 0 0 chr2R 3451895 3451932 -17694776 + AT_rich Low_complexity Low_complexity 1 37 0 1 611 24 0 0 0 chr2R 3455699 3455723 -17690985 + AT_rich Low_complexity Low_complexity 1 24 0 1 611 22 0 0 0 chr2R 3456771 3456793 -17689915 + AT_rich Low_complexity Low_complexity 1 22 0 1 611 22 70 0 0 chr2R 3462825 3462868 -17683840 + AT_rich Low_complexity Low_complexity 1 43 0 1 611 22 35 0 0 chr2R 3464516 3464545 -17682163 + AT_rich Low_complexity Low_complexity 1 29 0 1 611 201 94 0 0 chr2R 3465857 3465889 -17680819 + (A)n Simple_repeat Simple_repeat 1 32 0 1 611 282 73 0 0 chr2R 3472105 3472146 -17674562 + (TCC)n Simple_repeat Simple_repeat 1 41 0 1 611 246 32 0 0 chr2R 3472337 3472368 -17674340 + (A)n Simple_repeat Simple_repeat 1 31 0 1 611 192 40 0 0 chr2R 3473817 3473842 -17672866 + (TAGA)n Simple_repeat Simple_repeat 3 27 0 1 611 25 65 0 0 chr2R 3476676 3476722 -17669986 + AT_rich Low_complexity Low_complexity 1 46 0 1 611 207 196 0 21 chr2R 3483214 3483261 -17663447 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 1 611 240 111 0 0 chr2R 3483615 3483660 -17663048 + (TCTTG)n Simple_repeat Simple_repeat 3 47 0 1 611 21 36 0 0 chr2R 3485539 3485567 -17661141 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 216 224 17 0 chr2R 3488319 3488377 -17658331 + (CAT)n Simple_repeat Simple_repeat 1 59 0 1 611 429 185 23 82 chr2R 3490267 3490432 -17656276 - DNAREP1_DM LINE Penelope -109 485 370 1 611 22 0 0 0 chr2R 3492226 3492248 -17654460 + AT_rich Low_complexity Low_complexity 1 22 0 1 611 204 125 0 0 chr2R 3493979 3494011 -17652697 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 611 23 0 0 0 chr2R 3494579 3494602 -17652106 + AT_rich Low_complexity Low_complexity 1 23 0 1 611 36 0 0 0 chr2R 3495514 3495550 -17651158 + AT_rich Low_complexity Low_complexity 1 36 0 1 611 198 0 0 0 chr2R 3495967 3495989 -17650719 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1 611 35162 1 0 0 chr2R 3495989 3500000 -17646708 - I_DM LINE I -774 5457 1447 1 611 9642 1 0 0 chr2R 3500000 3501109 -17645599 - I_DM LINE I -4785 1446 338 1 611 235 235 20 0 chr2R 3501306 3501357 -17645351 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1 611 213 39 0 0 chr2R 3501695 3501721 -17644987 + (ATG)n Simple_repeat Simple_repeat 3 28 0 1 611 21 0 0 0 chr2R 3502372 3502393 -17644315 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 23 54 0 0 chr2R 3504992 3505029 -17641679 + AT_rich Low_complexity Low_complexity 1 37 0 1 611 24 0 0 0 chr2R 3505388 3505412 -17641296 + AT_rich Low_complexity Low_complexity 1 24 0 1 611 21 0 0 0 chr2R 3508673 3508694 -17638014 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 209 219 0 0 chr2R 3509113 3509154 -17637554 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 1 611 30 0 0 0 chr2R 3510285 3510315 -17636393 + AT_rich Low_complexity Low_complexity 1 30 0 1 611 183 42 0 0 chr2R 3511947 3511971 -17634737 + (A)n Simple_repeat Simple_repeat 1 24 0 1 611 186 133 0 0 chr2R 3512322 3512352 -17634356 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 611 201 175 0 0 chr2R 3513390 3513430 -17633278 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 1 611 217 263 0 38 chr2R 3514407 3514486 -17632222 + (CAG)n Simple_repeat Simple_repeat 1 76 0 1 611 212 191 0 21 chr2R 3515011 3515059 -17631649 + (CAGT)n Simple_repeat Simple_repeat 1 47 0 1 611 25 0 0 0 chr2R 3515945 3515970 -17630738 + AT_rich Low_complexity Low_complexity 1 25 0 1 611 243 0 0 0 chr2R 3516137 3516164 -17630544 + (CGGT)n Simple_repeat Simple_repeat 1 27 0 1 611 225 132 0 0 chr2R 3520866 3520904 -17625804 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 611 213 0 0 75 chr2R 3522971 3523011 -17623697 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 611 186 43 0 0 chr2R 3525187 3525210 -17621498 + (TCCG)n Simple_repeat Simple_repeat 2 24 0 1 611 201 176 0 0 chr2R 3526126 3526160 -17620548 + (TAA)n Simple_repeat Simple_repeat 3 36 0 1 612 28 0 0 0 chr2R 3541835 3541863 -17604845 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 23 68 0 0 chr2R 3550996 3551040 -17595668 + AT_rich Low_complexity Low_complexity 1 44 0 1 612 338 161 0 0 chr2R 3552918 3552974 -17593734 - DNAREP1_DM LINE Penelope 0 594 539 1 612 518 172 235 27 chr2R 3552993 3553142 -17593566 + DNAREP1_DM LINE Penelope 406 585 -9 1 612 24 32 0 0 chr2R 3559719 3559750 -17586958 + AT_rich Low_complexity Low_complexity 1 31 0 1 612 21 36 0 0 chr2R 3562000 3562028 -17584680 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 22 56 0 0 chr2R 3564588 3564624 -17582084 + AT_rich Low_complexity Low_complexity 1 36 0 1 612 21 36 0 0 chr2R 3564787 3564815 -17581893 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 339 25 0 0 chr2R 3568209 3568249 -17578459 + (TATG)n Simple_repeat Simple_repeat 4 43 0 1 612 22 0 0 0 chr2R 3569695 3569717 -17576991 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 279 0 0 0 chr2R 3576608 3576639 -17570069 + (GGA)n Simple_repeat Simple_repeat 2 32 0 1 612 192 40 0 0 chr2R 3580337 3580362 -17566346 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 612 279 93 0 0 chr2R 3580553 3580596 -17566112 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 612 185 86 57 0 chr2R 3581688 3581723 -17564985 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 612 231 88 0 0 chr2R 3581911 3581945 -17564763 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1 612 25 0 0 0 chr2R 3583442 3583467 -17563241 + AT_rich Low_complexity Low_complexity 1 25 0 1 612 42 0 0 0 chr2R 3585174 3585216 -17561492 + AT_rich Low_complexity Low_complexity 1 42 0 1 612 207 162 0 0 chr2R 3585762 3585799 -17560909 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 612 210 37 0 0 chr2R 3595192 3595219 -17551489 + (TTA)n Simple_repeat Simple_repeat 3 29 0 1 612 534 122 369 0 chr2R 3602675 3602857 -17543851 - DMRP1 Unknown Unknown -96 250 2 1 612 202 219 15 30 chr2R 3605298 3605364 -17541344 + T-rich Low_complexity Low_complexity 2 66 0 1 612 204 125 0 0 chr2R 3606022 3606054 -17540654 + (TATG)n Simple_repeat Simple_repeat 2 33 0 1 612 234 128 0 0 chr2R 3608227 3608266 -17538442 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 612 27 29 0 0 chr2R 3613099 3613133 -17533575 + AT_rich Low_complexity Low_complexity 1 34 0 1 612 27 29 0 0 chr2R 3614357 3614391 -17532317 + AT_rich Low_complexity Low_complexity 1 34 0 1 612 27 73 0 0 chr2R 3614532 3614587 -17532121 + AT_rich Low_complexity Low_complexity 1 55 0 1 612 243 61 0 0 chr2R 3618127 3618160 -17528548 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 612 262 269 0 0 chr2R 3622575 3622642 -17524066 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 612 246 280 0 0 chr2R 3622778 3622853 -17523855 + (TG)n Simple_repeat Simple_repeat 1 75 0 1 612 218 125 0 24 chr2R 3622991 3623032 -17523676 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 612 29 60 0 0 chr2R 3623406 3623456 -17523252 + AT_rich Low_complexity Low_complexity 1 50 0 1 612 183 80 0 0 chr2R 3624267 3624292 -17522416 + (TCCCG)n Simple_repeat Simple_repeat 4 28 0 1 612 201 253 12 12 chr2R 3624520 3624600 -17522108 + T-rich Low_complexity Low_complexity 5 84 0 1 612 28 71 0 0 chr2R 3624676 3624732 -17521976 + AT_rich Low_complexity Low_complexity 1 56 0 1 612 401 100 44 0 chr2R 3624732 3624822 -17521886 + (TG)n Simple_repeat Simple_repeat 1 94 0 1 612 357 86 0 0 chr2R 3625057 3625115 -17521593 + (TATTG)n Simple_repeat Simple_repeat 3 60 0 1 612 236 218 25 37 chr2R 3625414 3625495 -17521213 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 1 612 213 240 0 0 chr2R 3625721 3625771 -17520937 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 612 189 0 0 0 chr2R 3626133 3626154 -17520554 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 612 239 279 14 41 chr2R 3627349 3627495 -17519213 + (CTG)n Simple_repeat Simple_repeat 2 143 0 1 612 292 269 0 0 chr2R 3627581 3627659 -17519049 + (TGG)n Simple_repeat Simple_repeat 2 79 0 1 612 262 250 0 0 chr2R 3627709 3627777 -17518931 + (CTG)n Simple_repeat Simple_repeat 2 69 0 1 612 234 164 0 0 chr2R 3628027 3628082 -17518626 + (CTG)n Simple_repeat Simple_repeat 3 57 0 1 612 382 218 0 26 chr2R 3628101 3628214 -17518494 - ROO_I LTR Pao -7513 743 634 1 612 225 65 0 0 chr2R 3630029 3630060 -17516648 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 612 240 111 0 0 chr2R 3630440 3630476 -17516232 + (TATG)n Simple_repeat Simple_repeat 3 38 0 1 612 207 100 0 0 chr2R 3630533 3630563 -17516145 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 612 21 36 0 0 chr2R 3632190 3632218 -17514490 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 249 33 0 0 chr2R 3632983 3633013 -17513695 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 612 201 158 0 0 chr2R 3633172 3633210 -17513498 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 612 180 0 0 0 chr2R 3634590 3634610 -17512098 + (ATTCG)n Simple_repeat Simple_repeat 4 23 0 1 612 186 43 0 0 chr2R 3635197 3635220 -17511488 + (A)n Simple_repeat Simple_repeat 1 23 0 1 612 192 125 0 0 chr2R 3637463 3637495 -17509213 + (TTTTC)n Simple_repeat Simple_repeat 1 32 0 1 612 29 78 0 0 chr2R 3638675 3638739 -17507969 + AT_rich Low_complexity Low_complexity 1 64 0 1 612 265 189 0 39 chr2R 3639444 3639521 -17507187 + (TATATG)n Simple_repeat Simple_repeat 1 74 0 1 612 258 32 0 0 chr2R 3640189 3640220 -17506488 + (CCA)n Simple_repeat Simple_repeat 2 32 0 1 612 204 163 0 0 chr2R 3641481 3641524 -17505184 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 612 204 40 0 0 chr2R 3642036 3642061 -17504647 + (CAGTT)n Simple_repeat Simple_repeat 5 29 0 1 612 189 132 0 0 chr2R 3642137 3642175 -17504533 + (CAA)n Simple_repeat Simple_repeat 1 38 0 1 612 233 313 0 50 chr2R 3642270 3642391 -17504317 + ROO_I LTR Pao 641 755 -7501 1 612 330 129 0 0 chr2R 3643255 3643317 -17503391 + (GA)n Simple_repeat Simple_repeat 2 63 0 1 612 207 69 0 0 chr2R 3643984 3644013 -17502695 + (CAATT)n Simple_repeat Simple_repeat 5 33 0 1 612 241 266 0 0 chr2R 3645724 3645788 -17500920 + T-rich Low_complexity Low_complexity 1 64 0 1 612 186 43 0 0 chr2R 3645868 3645891 -17500817 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 612 261 98 0 0 chr2R 3646680 3646721 -17499987 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 612 23 0 0 0 chr2R 3646812 3646835 -17499873 + AT_rich Low_complexity Low_complexity 1 23 0 1 612 224 77 0 25 chr2R 3647885 3647925 -17498783 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 1 612 252 86 0 0 chr2R 3648343 3648378 -17498330 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 612 180 0 0 0 chr2R 3648439 3648459 -17498249 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 612 225 0 0 0 chr2R 3649535 3649560 -17497148 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 612 298 273 0 108 chr2R 3651307 3651403 -17495305 + DNAREP1_DM LINE Penelope 389 472 -122 1 612 207 0 0 0 chr2R 3651403 3651426 -17495282 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 612 298 273 0 108 chr2R 3651426 3651440 -17495268 + DNAREP1_DM LINE Penelope 473 486 -108 1 612 258 284 0 0 chr2R 3651861 3651935 -17494773 + A-rich Low_complexity Low_complexity 1 74 0 1 612 24 0 0 0 chr2R 3652084 3652108 -17494600 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 244 226 11 45 chr2R 3656470 3656558 -17490150 + (AACTG)n Simple_repeat Simple_repeat 1 85 0 1 612 183 139 0 0 chr2R 3656604 3656640 -17490068 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 612 198 0 0 0 chr2R 3656814 3656836 -17489872 + (CAA)n Simple_repeat Simple_repeat 1 22 0 1 612 31 26 0 0 chr2R 3657164 3657202 -17489506 + AT_rich Low_complexity Low_complexity 1 38 0 1 612 219 103 0 0 chr2R 3659023 3659062 -17487646 + (T)n Simple_repeat Simple_repeat 1 39 0 1 612 180 135 0 0 chr2R 3661523 3661560 -17485148 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 612 21 36 0 0 chr2R 3662114 3662142 -17484566 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 189 0 0 0 chr2R 3664230 3664251 -17482457 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 612 186 43 0 0 chr2R 3664864 3664887 -17481821 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 612 338 210 0 57 chr2R 3666570 3666676 -17480032 - ROO_I LTR Pao -7516 740 641 1 612 215 31 31 0 chr2R 3666833 3666865 -17479843 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 612 231 259 52 78 chr2R 3666865 3667039 -17479669 - HMSBEAGLE_I LTR Gypsy -5941 588 420 1 612 228 250 0 0 chr2R 3667811 3667859 -17478849 + (CATATA)n Simple_repeat Simple_repeat 2 49 0 1 613 483 215 188 42 chr2R 3672810 3672975 -17473733 - DNAREP1_DM LINE Penelope -157 437 249 1 613 237 254 0 0 chr2R 3674141 3674196 -17472512 + (TATG)n Simple_repeat Simple_repeat 3 57 0 1 613 321 89 0 0 chr2R 3675426 3675471 -17471237 + (CAGT)n Simple_repeat Simple_repeat 4 48 0 1 613 216 236 28 0 chr2R 3675560 3675632 -17471076 + (TA)n Simple_repeat Simple_repeat 1 74 0 1 613 210 105 0 0 chr2R 3675797 3675835 -17470873 + (A)n Simple_repeat Simple_repeat 1 38 0 1 613 21 0 0 0 chr2R 3681048 3681069 -17465639 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 23 0 0 0 chr2R 3688822 3688845 -17457863 + AT_rich Low_complexity Low_complexity 1 23 0 1 613 28 0 0 0 chr2R 3690720 3690748 -17455960 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 22 0 0 0 chr2R 3690895 3690917 -17455791 + AT_rich Low_complexity Low_complexity 1 22 0 1 613 25 51 0 0 chr2R 3694951 3694990 -17451718 + AT_rich Low_complexity Low_complexity 1 39 0 1 613 2473 4 0 4 chr2R 3703231 3703507 -17443201 + BURDOCK_LTR LTR Gypsy 1 275 0 1 613 53957 2 0 0 chr2R 3703507 3709366 -17437342 + BURDOCK_I LTR Gypsy 1 5860 0 1 613 2473 4 0 4 chr2R 3709367 3709643 -17437065 + BURDOCK_LTR LTR Gypsy 1 275 0 1 613 22 88 0 0 chr2R 3712858 3712915 -17433793 + AT_rich Low_complexity Low_complexity 1 57 0 1 613 330 26 0 0 chr2R 3724102 3724141 -17422567 + (CATAT)n Simple_repeat Simple_repeat 1 39 0 1 613 204 40 0 0 chr2R 3727539 3727564 -17419144 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 613 189 178 0 0 chr2R 3730905 3730950 -17415758 + (CTG)n Simple_repeat Simple_repeat 3 47 0 1 613 180 125 0 0 chr2R 3731082 3731114 -17415594 + (CTG)n Simple_repeat Simple_repeat 2 33 0 1 613 180 0 0 0 chr2R 3735997 3736017 -17410691 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 613 267 31 0 0 chr2R 3739061 3739093 -17407615 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 613 207 0 0 0 chr2R 3739354 3739377 -17407331 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 613 203 200 0 20 chr2R 3740039 3740090 -17406618 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 613 21 0 0 0 chr2R 3740528 3740549 -17406159 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 26 0 0 0 chr2R 3741267 3741293 -17405415 + AT_rich Low_complexity Low_complexity 1 26 0 1 613 26 30 0 0 chr2R 3741395 3741428 -17405280 + AT_rich Low_complexity Low_complexity 1 33 0 1 613 271 221 13 13 chr2R 3744330 3744408 -17402300 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 613 30 0 0 0 chr2R 3744658 3744688 -17402020 + AT_rich Low_complexity Low_complexity 1 30 0 1 613 195 42 0 0 chr2R 3746935 3746959 -17399749 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 613 300 211 0 0 chr2R 3749538 3749614 -17397094 + (CAT)n Simple_repeat Simple_repeat 1 76 0 1 613 2279 18 7 11 chr2R 3749820 3750096 -17396612 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 613 41573 1 1 0 chr2R 3750096 3754573 -17392135 + BLASTOPIA_I LTR Gypsy 1 4481 0 1 613 2279 18 7 11 chr2R 3754573 3754849 -17391859 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 613 43512 2 0 0 chr2R 3756748 3761469 -17385239 - DOC LINE Jockey -5 4720 1 1 613 22 0 0 0 chr2R 3764115 3764137 -17382571 + AT_rich Low_complexity Low_complexity 1 22 0 1 613 22 35 0 0 chr2R 3765077 3765106 -17381602 + AT_rich Low_complexity Low_complexity 1 29 0 1 613 31 0 0 0 chr2R 3766515 3766546 -17380162 + AT_rich Low_complexity Low_complexity 1 31 0 1 613 255 103 0 0 chr2R 3767013 3767052 -17379656 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 613 204 143 0 0 chr2R 3768056 3768098 -17378610 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 613 210 191 0 0 chr2R 3768494 3768541 -17378167 + T-rich Low_complexity Low_complexity 3 49 0 1 613 186 103 0 0 chr2R 3768630 3768659 -17378049 + (CGATG)n Simple_repeat Simple_repeat 1 29 0 1 613 36 23 0 0 chr2R 3770025 3770068 -17376640 + AT_rich Low_complexity Low_complexity 1 43 0 1 613 23 78 0 0 chr2R 3772359 3772410 -17374298 + AT_rich Low_complexity Low_complexity 1 51 0 1 613 202 217 28 28 chr2R 3773311 3773382 -17373326 + T-rich Low_complexity Low_complexity 2 72 0 1 613 203 179 26 0 chr2R 3773907 3773946 -17372762 + (TTG)n Simple_repeat Simple_repeat 3 42 0 1 613 228 143 0 0 chr2R 3774703 3774745 -17371963 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 613 234 62 0 0 chr2R 3775683 3775715 -17370993 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 613 232 231 19 0 chr2R 3776432 3776484 -17370224 + DNAREP1_DM LINE Penelope 432 484 -110 1 613 210 238 0 0 chr2R 3778066 3778129 -17368579 + A-rich Low_complexity Low_complexity 1 63 0 1 613 201 152 0 0 chr2R 3779179 3779212 -17367496 + (CCAA)n Simple_repeat Simple_repeat 4 36 0 1 613 21 57 0 0 chr2R 3780667 3780702 -17366006 + AT_rich Low_complexity Low_complexity 1 35 0 1 613 219 36 0 0 chr2R 3781404 3781432 -17365276 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 613 291 122 0 0 chr2R 3781711 3781760 -17364948 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 613 289 272 0 0 chr2R 3788638 3788730 -17357978 + (CAG)n Simple_repeat Simple_repeat 3 94 0 1 613 428 128 0 13 chr2R 3789684 3789763 -17356945 + (CAG)n Simple_repeat Simple_repeat 3 80 0 1 613 312 250 0 30 chr2R 3793146 3793245 -17353463 + ROO_I LTR Pao 637 732 -7524 1 613 207 69 0 0 chr2R 3793819 3793848 -17352860 + (CAG)n Simple_repeat Simple_repeat 2 30 0 1 613 191 61 0 93 chr2R 3797148 3797202 -17349506 + (CGAAA)n Simple_repeat Simple_repeat 3 51 0 1 613 33 25 0 0 chr2R 3799293 3799333 -17347375 + AT_rich Low_complexity Low_complexity 1 40 0 1 614 24 53 0 0 chr2R 3801652 3801690 -17345018 + AT_rich Low_complexity Low_complexity 1 38 0 1 614 25 0 0 0 chr2R 3804524 3804549 -17342159 + AT_rich Low_complexity Low_complexity 1 25 0 1 614 180 111 0 0 chr2R 3805075 3805102 -17341606 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 614 42 77 0 0 chr2R 3812636 3812727 -17333981 + AT_rich Low_complexity Low_complexity 1 91 0 1 614 1335 89 88 15 chr2R 3812952 3813156 -17333552 + DNAREP1_DM LINE Penelope 1 219 -375 1 614 29 47 0 0 chr2R 3814480 3814523 -17332185 + AT_rich Low_complexity Low_complexity 1 43 0 1 614 183 80 0 0 chr2R 3824013 3824038 -17322670 + (CAG)n Simple_repeat Simple_repeat 3 27 0 1 614 29 0 0 0 chr2R 3827951 3827980 -17318728 + AT_rich Low_complexity Low_complexity 1 29 0 1 614 23 33 0 0 chr2R 3829606 3829636 -17317072 + AT_rich Low_complexity Low_complexity 1 30 0 1 614 180 0 0 0 chr2R 3835072 3835092 -17311616 + (CCA)n Simple_repeat Simple_repeat 2 21 0 1 614 358 147 48 0 chr2R 3836800 3836882 -17309826 - DNAREP1_DM LINE Penelope -149 445 398 1 614 186 43 0 0 chr2R 3837970 3837993 -17308715 + (A)n Simple_repeat Simple_repeat 1 23 0 1 614 24 0 0 0 chr2R 3843497 3843521 -17303187 + AT_rich Low_complexity Low_complexity 1 24 0 1 614 23 33 0 0 chr2R 3847638 3847668 -17299040 + AT_rich Low_complexity Low_complexity 1 30 0 1 614 22 56 0 0 chr2R 3847695 3847731 -17298977 + AT_rich Low_complexity Low_complexity 1 36 0 1 614 207 204 0 22 chr2R 3852983 3853028 -17293680 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 614 26 0 0 0 chr2R 3854005 3854031 -17292677 + AT_rich Low_complexity Low_complexity 1 26 0 1 614 24 67 0 0 chr2R 3859791 3859836 -17286872 + AT_rich Low_complexity Low_complexity 1 45 0 1 614 23 0 0 0 chr2R 3859927 3859950 -17286758 + AT_rich Low_complexity Low_complexity 1 23 0 1 614 24 32 0 0 chr2R 3861507 3861538 -17285170 + AT_rich Low_complexity Low_complexity 1 31 0 1 614 228 211 0 0 chr2R 3872640 3872711 -17273997 + (TTG)n Simple_repeat Simple_repeat 2 72 0 1 614 191 36 36 0 chr2R 3874961 3874989 -17271719 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 614 29 0 0 0 chr2R 3878402 3878431 -17268277 + AT_rich Low_complexity Low_complexity 1 29 0 1 614 642 115 0 50 chr2R 3882777 3882896 -17263812 - DNAREP1_DM LINE Penelope -90 504 392 1 614 542 93 0 11 chr2R 3883442 3883529 -17263179 + (CTG)n Simple_repeat Simple_repeat 1 86 0 1 614 448 210 116 29 chr2R 3886793 3886965 -17259743 - DNAREP1_DM LINE Penelope -162 432 246 1 614 180 0 0 0 chr2R 3888814 3888834 -17257874 + (CTG)n Simple_repeat Simple_repeat 2 21 0 1 614 219 150 0 0 chr2R 3889168 3889208 -17257500 + (TCC)n Simple_repeat Simple_repeat 1 40 0 1 614 24 0 0 0 chr2R 3890425 3890449 -17256259 + AT_rich Low_complexity Low_complexity 1 24 0 1 614 207 258 0 0 chr2R 3897709 3897775 -17248933 + T-rich Low_complexity Low_complexity 3 68 0 1 614 180 176 0 0 chr2R 3900516 3900550 -17246158 + (CTG)n Simple_repeat Simple_repeat 2 35 0 1 614 342 67 0 0 chr2R 3900951 3900996 -17245712 + (CGAAT)n Simple_repeat Simple_repeat 5 49 0 1 614 38 39 0 0 chr2R 3902111 3902163 -17244545 + AT_rich Low_complexity Low_complexity 1 52 0 1 614 44 35 0 0 chr2R 3902184 3902242 -17244466 + AT_rich Low_complexity Low_complexity 1 58 0 1 614 6460 28 109 2 chr2R 3903210 3904072 -17242636 + FB4_DM DNA Tc1 1 954 -3135 1 614 6577 16 111 1 chr2R 3904332 3905171 -17241537 - FB4_DM DNA Tc1 -3158 931 1 1 614 212 217 33 0 chr2R 3906300 3906360 -17240348 + (CTG)n Simple_repeat Simple_repeat 3 64 0 1 614 538 179 120 0 chr2R 3907435 3907552 -17239156 + DNAREP1_DM LINE Penelope 457 587 -7 1 614 22 0 0 0 chr2R 3907629 3907651 -17239057 + AT_rich Low_complexity Low_complexity 1 22 0 1 614 342 225 0 0 chr2R 3908182 3908293 -17238415 + (AGATG)n Simple_repeat Simple_repeat 1 111 0 1 614 183 42 0 0 chr2R 3909587 3909611 -17237097 + (GGGAA)n Simple_repeat Simple_repeat 4 27 0 1 614 24 32 0 0 chr2R 3910045 3910076 -17236632 + AT_rich Low_complexity Low_complexity 1 31 0 1 614 201 39 0 0 chr2R 3910107 3910133 -17236575 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 614 240 130 0 0 chr2R 3913884 3913930 -17232778 + (CAGAA)n Simple_repeat Simple_repeat 3 48 0 1 614 25 51 0 0 chr2R 3914435 3914474 -17232234 + AT_rich Low_complexity Low_complexity 1 39 0 1 614 238 288 0 0 chr2R 3914664 3914723 -17231985 + (CTGGGG)n Simple_repeat Simple_repeat 6 64 0 1 614 25 0 0 0 chr2R 3914931 3914956 -17231752 + AT_rich Low_complexity Low_complexity 1 25 0 1 614 210 37 0 0 chr2R 3915903 3915930 -17230778 + (CTCA)n Simple_repeat Simple_repeat 4 30 0 1 614 223 178 0 43 chr2R 3917061 3917132 -17229576 + (TATATG)n Simple_repeat Simple_repeat 1 67 0 1 614 213 121 0 0 chr2R 3918820 3918853 -17227855 + (CTG)n Simple_repeat Simple_repeat 3 35 0 1 614 180 0 0 0 chr2R 3919326 3919346 -17227362 + (A)n Simple_repeat Simple_repeat 1 20 0 1 614 25 0 0 0 chr2R 3921747 3921772 -17224936 + AT_rich Low_complexity Low_complexity 1 25 0 1 614 234 0 0 0 chr2R 3925016 3925042 -17221666 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 1 614 192 135 0 0 chr2R 3925350 3925387 -17221321 + (CCCCAA)n Simple_repeat Simple_repeat 2 38 0 1 614 207 170 0 0 chr2R 3925944 3925991 -17220717 + (GCTG)n Simple_repeat Simple_repeat 4 50 0 1 614 234 105 0 0 chr2R 3926517 3926555 -17220153 + (CGAAT)n Simple_repeat Simple_repeat 5 42 0 1 614 25 31 0 0 chr2R 3927114 3927146 -17219562 + AT_rich Low_complexity Low_complexity 1 32 0 1 614 204 97 0 0 chr2R 3927727 3927758 -17218950 + (TGG)n Simple_repeat Simple_repeat 2 32 0 1 614 27 29 0 0 chr2R 3928633 3928667 -17218041 + AT_rich Low_complexity Low_complexity 1 34 0 1 614 336 161 0 0 chr2R 3932083 3932145 -17214563 + (ACTG)n Simple_repeat Simple_repeat 1 62 0 1 615 281 109 0 18 chr2R 3933154 3933210 -17213498 + (TGGA)n Simple_repeat Simple_repeat 1 55 0 1 615 347 218 129 0 chr2R 3936162 3936263 -17210445 - DNAREP1_DM LINE Penelope -117 477 364 1 615 25 51 0 0 chr2R 3937198 3937237 -17209471 + AT_rich Low_complexity Low_complexity 1 39 0 1 615 26 30 0 0 chr2R 3938399 3938432 -17208276 + AT_rich Low_complexity Low_complexity 1 33 0 1 615 26 50 0 0 chr2R 3939223 3939263 -17207445 + AT_rich Low_complexity Low_complexity 1 40 0 1 615 216 287 0 22 chr2R 3940889 3940978 -17205730 + (TATATG)n Simple_repeat Simple_repeat 4 90 0 1 615 222 105 0 0 chr2R 3941167 3941205 -17205503 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 615 180 0 0 0 chr2R 3941755 3941775 -17204933 + (CTCCG)n Simple_repeat Simple_repeat 1 20 0 1 615 204 125 0 0 chr2R 3942429 3942461 -17204247 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 615 24 0 0 0 chr2R 3942668 3942692 -17204016 + AT_rich Low_complexity Low_complexity 1 24 0 1 615 25 31 0 0 chr2R 3942707 3942739 -17203969 + AT_rich Low_complexity Low_complexity 1 32 0 1 615 228 67 0 0 chr2R 3943281 3943311 -17203397 + (ATGGTG)n Simple_repeat Simple_repeat 4 33 0 1 615 234 176 0 0 chr2R 3943513 3943564 -17203144 + (TTG)n Simple_repeat Simple_repeat 1 51 0 1 615 228 67 0 0 chr2R 3944471 3944501 -17202207 + (CCG)n Simple_repeat Simple_repeat 2 31 0 1 615 198 167 0 0 chr2R 3946570 3946606 -17200102 + (CACCAT)n Simple_repeat Simple_repeat 3 38 0 1 615 186 71 0 0 chr2R 3947925 3947953 -17198755 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 1 615 234 200 18 18 chr2R 3948042 3948098 -17198610 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 615 264 154 0 0 chr2R 3948098 3948150 -17198558 + (CAA)n Simple_repeat Simple_repeat 1 52 0 1 615 21 0 0 0 chr2R 3948557 3948578 -17198130 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 183 204 0 0 chr2R 3948761 3948805 -17197903 + (TTG)n Simple_repeat Simple_repeat 1 44 0 1 615 216 191 0 0 chr2R 3949022 3949069 -17197639 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 615 205 254 0 0 chr2R 3950299 3950362 -17196346 + GA-rich Low_complexity Low_complexity 2 64 0 1 615 186 143 0 0 chr2R 3952535 3952570 -17194138 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 615 300 53 0 0 chr2R 3952947 3952985 -17193723 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1 615 180 111 0 0 chr2R 3953236 3953263 -17193445 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 615 24 21 0 60 chr2R 3953656 3953706 -17193002 + AT_rich Low_complexity Low_complexity 1 47 0 1 615 200 338 15 7 chr2R 3958442 3958579 -17188129 + (CGG)n Simple_repeat Simple_repeat 2 139 0 1 615 230 345 20 20 chr2R 3961725 3961885 -17184823 + (CGG)n Simple_repeat Simple_repeat 1 160 0 1 615 22 0 0 0 chr2R 3962641 3962663 -17184045 + AT_rich Low_complexity Low_complexity 1 22 0 1 615 207 216 20 0 chr2R 3965399 3965450 -17181258 + (CAA)n Simple_repeat Simple_repeat 1 52 0 1 615 220 220 0 0 chr2R 3965659 3965709 -17180999 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 615 25 51 0 0 chr2R 3978960 3978999 -17167709 + AT_rich Low_complexity Low_complexity 1 39 0 1 615 3605 5 7 7 chr2R 3994549 3994963 -17151745 + DM297_LTR LTR Gypsy 1 414 0 1 615 34660 6 0 1 chr2R 3994963 3998866 -17147842 + DM297_I LTR Gypsy 1 3900 -2267 1 615 3034 22 0 0 chr2R 3998859 3999221 -17147487 + DM297_I LTR Gypsy 4198 4559 -1608 1 615 7042 4 0 0 chr2R 3999218 4000000 -17146708 + DM297_I LTR Gypsy 4728 5509 -658 1 615 5420 11 0 0 chr2R 4000000 4000658 -17146050 + DM297_I LTR Gypsy 5510 6167 0 1 615 3591 5 7 7 chr2R 4000658 4001072 -17145636 + DM297_LTR LTR Gypsy 1 414 0 1 615 557 252 0 0 chr2R 4001080 4001195 -17145513 - TC1_DM DNA Tc1 -315 1351 1237 1 615 399 342 25 0 chr2R 4001324 4001485 -17145223 - TC1_DM DNA Tc1 -604 1062 898 1 615 192 97 0 0 chr2R 4009942 4009973 -17136735 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 615 27 62 0 0 chr2R 4019012 4019060 -17127648 + AT_rich Low_complexity Low_complexity 1 48 0 1 615 250 348 0 0 chr2R 4021393 4021571 -17125137 + A-rich Low_complexity Low_complexity 1 178 0 1 615 30 0 0 0 chr2R 4021625 4021655 -17125053 + AT_rich Low_complexity Low_complexity 1 30 0 1 615 304 247 118 0 chr2R 4023479 4023564 -17123144 + DNAREP1_DM LINE Penelope 433 527 -67 1 615 24 32 0 0 chr2R 4023593 4023624 -17123084 + AT_rich Low_complexity Low_complexity 1 31 0 1 615 180 0 0 0 chr2R 4033109 4033129 -17113579 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 1 615 25 0 0 0 chr2R 4033756 4033781 -17112927 + AT_rich Low_complexity Low_complexity 1 25 0 1 615 23 0 0 0 chr2R 4034425 4034448 -17112260 + AT_rich Low_complexity Low_complexity 1 23 0 1 615 23 0 0 0 chr2R 4034576 4034599 -17112109 + AT_rich Low_complexity Low_complexity 1 23 0 1 615 261 0 0 0 chr2R 4037599 4037628 -17109080 + (A)n Simple_repeat Simple_repeat 1 29 0 1 615 27 49 0 0 chr2R 4040114 4040155 -17106553 + AT_rich Low_complexity Low_complexity 1 41 0 1 615 26 0 0 0 chr2R 4046422 4046448 -17100260 + AT_rich Low_complexity Low_complexity 1 26 0 1 615 25 51 0 0 chr2R 4046518 4046557 -17100151 + AT_rich Low_complexity Low_complexity 1 39 0 1 615 236 102 61 0 chr2R 4048479 4048528 -17098180 - PROTOP_B DNA P -612 541 490 1 615 202 343 0 0 chr2R 4052877 4052947 -17093761 + GA-rich Low_complexity Low_complexity 1 70 0 1 615 22 35 0 0 chr2R 4060426 4060455 -17086253 + AT_rich Low_complexity Low_complexity 1 29 0 1 615 193 70 22 44 chr2R 4060590 4060635 -17086073 + (TAAAG)n Simple_repeat Simple_repeat 5 48 0 1 615 192 200 0 0 chr2R 4062222 4062272 -17084436 + (CAG)n Simple_repeat Simple_repeat 3 52 0 1 615 208 235 0 0 chr2R 4062502 4062553 -17084155 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 1 615 21 0 0 0 chr2R 4063117 4063138 -17083570 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 201 39 0 0 chr2R 4063389 4063415 -17083293 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 1 616 213 39 0 0 chr2R 4065221 4065247 -17081461 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 616 28 0 0 0 chr2R 4065840 4065868 -17080840 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 180 0 0 0 chr2R 4068034 4068054 -17078654 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 616 330 87 0 0 chr2R 4068875 4068921 -17077787 + (CTG)n Simple_repeat Simple_repeat 3 48 0 1 616 46 45 0 0 chr2R 4074080 4074147 -17072561 + AT_rich Low_complexity Low_complexity 1 67 0 1 616 279 0 0 0 chr2R 4075773 4075804 -17070904 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 616 26 0 0 0 chr2R 4077483 4077509 -17069199 + AT_rich Low_complexity Low_complexity 1 26 0 1 616 180 125 0 0 chr2R 4082431 4082463 -17064245 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 616 25 0 0 0 chr2R 4084027 4084052 -17062656 + AT_rich Low_complexity Low_complexity 1 25 0 1 616 272 27 27 0 chr2R 4085076 4085113 -17061595 + (TCTA)n Simple_repeat Simple_repeat 4 41 0 1 616 192 111 0 0 chr2R 4086539 4086575 -17060133 + (TTCC)n Simple_repeat Simple_repeat 4 39 0 1 616 350 235 0 0 chr2R 4088849 4088930 -17057778 + DNAREP1_DM LINE Penelope 1 81 -513 1 616 230 245 143 41 chr2R 4089060 4089158 -17057550 - DNAREP1_DM LINE Penelope -484 110 3 1 616 212 288 0 0 chr2R 4092910 4092969 -17053739 + CT-rich Low_complexity Low_complexity 2 60 0 1 616 22 0 0 0 chr2R 4100933 4100955 -17045753 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 31 58 0 0 chr2R 4115271 4115323 -17031385 + AT_rich Low_complexity Low_complexity 1 52 0 1 616 25 51 0 0 chr2R 4116122 4116161 -17030547 + AT_rich Low_complexity Low_complexity 1 39 0 1 616 204 220 0 0 chr2R 4124181 4124231 -17022477 + GA-rich Low_complexity Low_complexity 3 52 0 1 616 202 296 0 30 chr2R 4126846 4126947 -17019761 + GA-rich Low_complexity Low_complexity 3 100 0 1 616 195 42 0 0 chr2R 4128099 4128123 -17018585 + (TATG)n Simple_repeat Simple_repeat 1 24 0 1 616 32 67 0 0 chr2R 4128993 4129053 -17017655 + AT_rich Low_complexity Low_complexity 1 60 0 1 616 189 74 0 0 chr2R 4129261 4129288 -17017420 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 616 232 222 0 0 chr2R 4133739 4133784 -17012924 + GA-rich Low_complexity Low_complexity 1 45 0 1 616 21 0 0 0 chr2R 4139049 4139070 -17007638 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 241 121 51 17 chr2R 4139460 4139519 -17007189 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 1 616 260 37 0 69 chr2R 4139901 4139959 -17006749 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 1 616 201 39 0 0 chr2R 4141253 4141279 -17005429 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 1 616 28 48 0 0 chr2R 4142220 4142262 -17004446 + AT_rich Low_complexity Low_complexity 1 42 0 1 616 204 143 0 0 chr2R 4142655 4142697 -17004011 + (GGA)n Simple_repeat Simple_repeat 2 43 0 1 616 22 35 0 0 chr2R 4143529 4143558 -17003150 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 28 48 0 0 chr2R 4147954 4147996 -16998712 + AT_rich Low_complexity Low_complexity 1 42 0 1 616 22 0 0 0 chr2R 4151886 4151908 -16994800 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 23 0 0 0 chr2R 4152490 4152513 -16994195 + AT_rich Low_complexity Low_complexity 1 23 0 1 616 25 0 0 0 chr2R 4160818 4160843 -16985865 + AT_rich Low_complexity Low_complexity 1 25 0 1 616 48 18 0 0 chr2R 4160969 4161024 -16985684 + AT_rich Low_complexity Low_complexity 1 55 0 1 616 312 172 0 79 chr2R 4161386 4161449 -16985259 - DNAREP1_DM LINE Penelope -108 486 431 1 616 22 0 0 0 chr2R 4162087 4162109 -16984599 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 25 31 0 0 chr2R 4166545 4166577 -16980131 + AT_rich Low_complexity Low_complexity 1 32 0 1 616 189 175 0 0 chr2R 4167930 4167970 -16978738 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 616 22 35 0 0 chr2R 4169461 4169490 -16977218 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 204 200 0 0 chr2R 4173357 4173397 -16973311 + (TATG)n Simple_repeat Simple_repeat 3 42 0 1 616 220 229 0 0 chr2R 4173572 4173620 -16973088 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 616 27 0 0 0 chr2R 4174192 4174219 -16972489 + AT_rich Low_complexity Low_complexity 1 27 0 1 616 21 36 0 0 chr2R 4174478 4174506 -16972202 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 318 266 0 31 chr2R 4174706 4174803 -16971905 + (CCCCAA)n Simple_repeat Simple_repeat 3 96 0 1 616 217 89 0 43 chr2R 4174890 4174937 -16971771 + (TTG)n Simple_repeat Simple_repeat 2 46 0 1 616 235 182 18 35 chr2R 4175572 4175629 -16971079 + (TCG)n Simple_repeat Simple_repeat 2 57 0 1 616 186 208 0 0 chr2R 4176649 4176702 -16970006 + (CGA)n Simple_repeat Simple_repeat 1 53 0 1 616 30 27 0 0 chr2R 4178534 4178571 -16968137 + AT_rich Low_complexity Low_complexity 1 37 0 1 616 22 0 0 0 chr2R 4180548 4180570 -16966138 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 234 136 0 0 chr2R 4185741 4185785 -16960923 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 616 228 100 0 0 chr2R 4186924 4186964 -16959744 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 616 30 0 0 0 chr2R 4187344 4187374 -16959334 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 204 118 0 29 chr2R 4187841 4187876 -16958832 + (CAG)n Simple_repeat Simple_repeat 1 34 0 1 616 327 179 0 0 chr2R 4188132 4188199 -16958509 + (ATG)n Simple_repeat Simple_repeat 3 69 0 1 616 205 311 9 0 chr2R 4188679 4188785 -16957923 + CT-rich Low_complexity Low_complexity 1 107 0 1 616 242 231 0 0 chr2R 4188731 4188783 -16957925 + (TCTCTG)n Simple_repeat Simple_repeat 4 55 0 1 616 224 208 0 0 chr2R 4189175 4189223 -16957485 + (TGGG)n Simple_repeat Simple_repeat 1 48 0 1 616 276 91 0 0 chr2R 4189310 4189354 -16957354 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 616 207 0 0 0 chr2R 4190573 4190596 -16956112 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 616 40 0 0 0 chr2R 4191449 4191489 -16955219 + AT_rich Low_complexity Low_complexity 1 40 0 1 616 222 204 0 0 chr2R 4191712 4191756 -16954952 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 616 27 106 0 0 chr2R 4192751 4192855 -16953853 + AT_rich Low_complexity Low_complexity 1 104 0 1 616 25 31 0 0 chr2R 4194259 4194291 -16952417 + AT_rich Low_complexity Low_complexity 1 32 0 1 617 209 261 0 0 chr2R 4194721 4194786 -16951922 + (ATG)n Simple_repeat Simple_repeat 1 65 0 1 617 216 67 0 0 chr2R 4195106 4195136 -16951572 + (A)n Simple_repeat Simple_repeat 1 30 0 1 617 29 0 0 0 chr2R 4195554 4195583 -16951125 + AT_rich Low_complexity Low_complexity 1 29 0 1 617 24 0 0 0 chr2R 4197343 4197367 -16949341 + AT_rich Low_complexity Low_complexity 1 24 0 1 617 32 0 0 0 chr2R 4197965 4197997 -16948711 + AT_rich Low_complexity Low_complexity 1 32 0 1 617 310 85 34 0 chr2R 4198307 4198366 -16948342 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 617 275 190 12 81 chr2R 4199900 4199986 -16946722 + PENELOPE LINE Penelope 3926 4005 -156 1 617 200 132 26 0 chr2R 4202703 4202741 -16943967 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 617 25 0 0 0 chr2R 4206901 4206926 -16939782 + AT_rich Low_complexity Low_complexity 1 25 0 1 617 180 0 0 0 chr2R 4207448 4207468 -16939240 + (ATG)n Simple_repeat Simple_repeat 1 20 0 1 617 189 226 0 0 chr2R 4208233 4208286 -16938422 + (CAA)n Simple_repeat Simple_repeat 1 53 0 1 617 34 0 0 0 chr2R 4209671 4209705 -16937003 + AT_rich Low_complexity Low_complexity 1 34 0 1 617 26 30 0 0 chr2R 4209893 4209926 -16936782 + AT_rich Low_complexity Low_complexity 1 33 0 1 617 240 122 0 0 chr2R 4210149 4210190 -16936518 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 617 25 65 0 0 chr2R 4210468 4210514 -16936194 + AT_rich Low_complexity Low_complexity 1 46 0 1 617 189 74 0 0 chr2R 4212337 4212364 -16934344 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 617 47 67 0 0 chr2R 4213424 4213513 -16933195 + AT_rich Low_complexity Low_complexity 1 89 0 1 617 28 48 0 0 chr2R 4214171 4214213 -16932495 + AT_rich Low_complexity Low_complexity 1 42 0 1 617 201 183 0 0 chr2R 4214741 4214801 -16931907 + GA-rich Low_complexity Low_complexity 1 60 0 1 617 299 176 13 13 chr2R 4214881 4214956 -16931752 - ROO_I LTR Pao -7529 727 653 1 617 29 84 0 0 chr2R 4215706 4215777 -16930931 + AT_rich Low_complexity Low_complexity 1 71 0 1 617 21 0 0 0 chr2R 4217754 4217775 -16928933 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 4017 0 0 0 chr2R 4218422 4218850 -16927858 + ROO_LTR LTR Pao 1 428 0 1 617 221 163 0 20 chr2R 4218958 4219008 -16927700 + (TTA)n Simple_repeat Simple_repeat 2 50 0 1 617 21 0 0 0 chr2R 4220994 4221015 -16925693 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 211 189 0 0 chr2R 4223546 4223583 -16923125 + C-rich Low_complexity Low_complexity 6 42 0 1 617 183 162 0 0 chr2R 4224505 4224542 -16922166 + CT-rich Low_complexity Low_complexity 1 37 0 1 617 34 0 0 0 chr2R 4228062 4228096 -16918612 + AT_rich Low_complexity Low_complexity 1 34 0 1 617 24 0 0 0 chr2R 4230475 4230499 -16916209 + AT_rich Low_complexity Low_complexity 1 24 0 1 617 279 93 0 0 chr2R 4231891 4231934 -16914774 + (CAG)n Simple_repeat Simple_repeat 2 44 0 1 617 228 135 0 0 chr2R 4232182 4232219 -16914489 + (CTG)n Simple_repeat Simple_repeat 2 38 0 1 617 267 175 0 0 chr2R 4233244 4233301 -16913407 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 617 268 244 0 0 chr2R 4235171 4235249 -16911459 + ROO_I LTR Pao 662 739 -7517 1 617 318 148 0 0 chr2R 4235327 4235381 -16911327 + (CAA)n Simple_repeat Simple_repeat 1 54 0 1 617 211 184 0 0 chr2R 4235404 4235442 -16911266 + (CAG)n Simple_repeat Simple_repeat 3 40 0 1 617 220 200 0 0 chr2R 4235441 4235496 -16911212 + CT-rich Low_complexity Low_complexity 1 55 0 1 617 203 234 0 30 chr2R 4236336 4236402 -16910306 + A-rich Low_complexity Low_complexity 1 64 0 1 617 21 0 0 0 chr2R 4237976 4237997 -16908711 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 25 83 0 0 chr2R 4239741 4239801 -16906907 + AT_rich Low_complexity Low_complexity 1 60 0 1 617 21 0 0 0 chr2R 4240187 4240208 -16906500 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 216 0 0 0 chr2R 4240381 4240405 -16906303 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 617 21 57 0 0 chr2R 4240973 4241008 -16905700 + AT_rich Low_complexity Low_complexity 1 35 0 1 617 26 0 0 0 chr2R 4241114 4241140 -16905568 + AT_rich Low_complexity Low_complexity 1 26 0 1 617 21 57 0 0 chr2R 4244458 4244493 -16902215 + AT_rich Low_complexity Low_complexity 1 35 0 1 617 309 151 0 0 chr2R 4244752 4244805 -16901903 + (ATGGTG)n Simple_repeat Simple_repeat 3 55 0 1 617 248 284 0 0 chr2R 4246894 4246968 -16899740 + GA-rich Low_complexity Low_complexity 2 75 0 1 617 27 49 0 0 chr2R 4250768 4250809 -16895899 + AT_rich Low_complexity Low_complexity 1 41 0 1 617 231 163 41 0 chr2R 4254104 4254153 -16892555 - DNAREP1_DM LINE Penelope -66 528 478 1 617 1231 164 3 89 chr2R 4254211 4254526 -16892182 - DNAREP1_DM LINE Penelope -300 294 7 1 617 352 171 105 0 chr2R 4257794 4257870 -16888838 - DNAREP1_DM LINE Penelope -3 591 508 1 617 200 93 0 44 chr2R 4258034 4258079 -16888629 + (TTTTA)n Simple_repeat Simple_repeat 4 46 0 1 617 1470 88 96 9 chr2R 4258079 4258309 -16888399 - DNAREP1_DM LINE Penelope -16 578 329 1 617 21 0 0 0 chr2R 4259631 4259652 -16887056 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 208 278 0 0 chr2R 4260616 4260670 -16886038 + (CGGA)n Simple_repeat Simple_repeat 1 54 0 1 617 25 31 0 0 chr2R 4261101 4261133 -16885575 + AT_rich Low_complexity Low_complexity 1 32 0 1 617 234 188 31 15 chr2R 4261926 4261991 -16884717 + (TTGGGG)n Simple_repeat Simple_repeat 5 70 0 1 617 204 67 0 0 chr2R 4263544 4263574 -16883134 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 617 192 77 0 0 chr2R 4266732 4266758 -16879950 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 617 189 0 0 0 chr2R 4267985 4268006 -16878702 + (TC)n Simple_repeat Simple_repeat 1 21 0 1 617 204 150 25 0 chr2R 4270095 4270135 -16876573 + (CCA)n Simple_repeat Simple_repeat 2 42 0 1 617 180 125 0 0 chr2R 4270948 4270980 -16875728 + (CTG)n Simple_repeat Simple_repeat 1 32 0 1 617 235 152 67 17 chr2R 4271086 4271146 -16875562 + T-rich Low_complexity Low_complexity 3 65 0 1 617 29 47 0 0 chr2R 4271681 4271724 -16874984 + AT_rich Low_complexity Low_complexity 1 43 0 1 617 23 33 0 0 chr2R 4271757 4271787 -16874921 + AT_rich Low_complexity Low_complexity 1 30 0 1 617 206 220 0 0 chr2R 4272254 4272304 -16874404 + (TGG)n Simple_repeat Simple_repeat 3 52 0 1 617 186 167 0 0 chr2R 4273804 4273840 -16872868 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 617 249 83 0 0 chr2R 4275329 4275365 -16871343 + (CCA)n Simple_repeat Simple_repeat 3 38 0 1 617 206 281 0 0 chr2R 4275596 4275660 -16871048 + GA-rich Low_complexity Low_complexity 2 65 0 1 617 240 35 0 0 chr2R 4276500 4276529 -16870179 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 617 216 97 0 0 chr2R 4277782 4277813 -16868895 + (CAG)n Simple_repeat Simple_repeat 1 31 0 1 617 283 86 16 49 chr2R 4277962 4278023 -16868685 + (CAG)n Simple_repeat Simple_repeat 3 61 0 1 617 269 237 0 0 chr2R 4278023 4278082 -16868626 + GA-rich Low_complexity Low_complexity 1 59 0 1 617 29 28 0 0 chr2R 4281879 4281915 -16864793 + AT_rich Low_complexity Low_complexity 1 36 0 1 617 197 65 0 31 chr2R 4282146 4282178 -16864530 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 617 26 64 0 0 chr2R 4283858 4283905 -16862803 + AT_rich Low_complexity Low_complexity 1 47 0 1 617 24 32 0 0 chr2R 4284961 4284992 -16861716 + AT_rich Low_complexity Low_complexity 1 31 0 1 617 43552 1 0 0 chr2R 4285770 4290490 -16856218 + DOC LINE Jockey 1 4719 -6 1 617 3768 72 17 0 chr2R 4303986 4304550 -16842158 + I_DM LINE I 4866 5470 -761 1 617 21 36 0 0 chr2R 4304682 4304710 -16841998 + AT_rich Low_complexity Low_complexity 1 28 0 1 617 185 0 0 39 chr2R 4311139 4311165 -16835543 + (TAA)n Simple_repeat Simple_repeat 3 27 0 1 617 23 68 0 0 chr2R 4319291 4319335 -16827373 + AT_rich Low_complexity Low_complexity 1 44 0 1 617 666 183 325 6 chr2R 4319852 4320170 -16826538 + DNAREP1_DM LINE Penelope 50 592 -2 1 617 309 228 99 106 chr2R 4323902 4324044 -16822664 - DNAREP1_DM LINE Penelope 0 594 454 1 617 1217 99 68 32 chr2R 4324404 4324624 -16822084 - Jockey2 LINE Jockey -18 3410 3183 1 618 22 0 0 0 chr2R 4326432 4326454 -16820254 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 21 0 0 0 chr2R 4326736 4326757 -16819951 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 22 0 0 0 chr2R 4330769 4330791 -16815917 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 26 0 0 0 chr2R 4330854 4330880 -16815828 + AT_rich Low_complexity Low_complexity 1 26 0 1 618 25 51 0 0 chr2R 4331133 4331172 -16815536 + AT_rich Low_complexity Low_complexity 1 39 0 1 618 35 63 0 0 chr2R 4340775 4340838 -16805870 + AT_rich Low_complexity Low_complexity 1 63 0 1 618 5317 97 57 25 chr2R 4348546 4349359 -16797349 - S_DM DNA Tc1 -322 1414 576 1 618 1386 121 66 16 chr2R 4349364 4349607 -16797101 - DM412B_LTR LTR Gypsy -316 255 1 1 618 21 0 0 0 chr2R 4353848 4353869 -16792839 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 24 32 0 0 chr2R 4361337 4361368 -16785340 + AT_rich Low_complexity Low_complexity 1 31 0 1 618 26 30 0 0 chr2R 4361539 4361572 -16785136 + AT_rich Low_complexity Low_complexity 1 33 0 1 618 27 0 0 0 chr2R 4362247 4362274 -16784434 + AT_rich Low_complexity Low_complexity 1 27 0 1 618 233 262 12 12 chr2R 4362830 4362911 -16783797 + (CTG)n Simple_repeat Simple_repeat 3 83 0 1 618 278 260 41 0 chr2R 4363216 4363289 -16783419 - ROO_I LTR Pao -7519 737 662 1 618 257 65 0 0 chr2R 4364614 4364645 -16782063 + DNAREP1_DM LINE Penelope 8 38 -556 1 618 929 159 213 0 chr2R 4364678 4364885 -16781823 + DNAREP1_DM LINE Penelope 344 594 0 1 618 22 0 0 0 chr2R 4372878 4372900 -16773808 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 37 23 0 0 chr2R 4375335 4375379 -16771329 + AT_rich Low_complexity Low_complexity 1 44 0 1 618 259 226 0 0 chr2R 4376200 4376253 -16770455 - DNAREP1_DM LINE Penelope -541 53 1 1 618 15470 2 0 0 chr2R 4378127 4379783 -16766925 - DMRT1B LINE R1 0 5183 3528 1 618 201 26 79 0 chr2R 4379786 4379824 -16766884 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 618 28 48 0 0 chr2R 4380004 4380046 -16766662 + AT_rich Low_complexity Low_complexity 1 42 0 1 618 256 282 0 0 chr2R 4382647 4382725 -16763983 + (TGGG)n Simple_repeat Simple_repeat 2 79 0 1 618 378 224 56 34 chr2R 4391645 4391734 -16754974 - DNAREP1_DM LINE Penelope -93 501 424 1 618 34 42 0 0 chr2R 4392056 4392104 -16754604 + AT_rich Low_complexity Low_complexity 1 48 0 1 618 213 39 0 0 chr2R 4394510 4394536 -16752172 + (TTTTTA)n Simple_repeat Simple_repeat 1 26 0 1 618 369 0 0 0 chr2R 4397315 4397356 -16749352 + (GAGTG)n Simple_repeat Simple_repeat 1 41 0 1 618 210 286 0 0 chr2R 4399143 4399199 -16747509 + (CGA)n Simple_repeat Simple_repeat 2 57 0 1 618 27 62 0 0 chr2R 4406184 4406232 -16740476 + AT_rich Low_complexity Low_complexity 1 48 0 1 618 21 36 0 0 chr2R 4408389 4408417 -16738291 + AT_rich Low_complexity Low_complexity 1 28 0 1 618 364 196 0 32 chr2R 4409381 4409476 -16737232 - ROO_I LTR Pao -7521 735 644 1 618 267 81 0 0 chr2R 4412551 4412588 -16734120 + DNAREP1_DM LINE Penelope 545 581 -13 1 618 22 35 0 0 chr2R 4416049 4416078 -16730630 + AT_rich Low_complexity Low_complexity 1 29 0 1 618 336 138 17 17 chr2R 4417073 4417132 -16729576 + DNAREP1_DM LINE Penelope 1 59 -535 1 618 33 56 0 0 chr2R 4419587 4419641 -16727067 + AT_rich Low_complexity Low_complexity 1 54 0 1 618 22 0 0 0 chr2R 4422351 4422373 -16724335 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 23 0 0 0 chr2R 4422436 4422459 -16724249 + AT_rich Low_complexity Low_complexity 1 23 0 1 618 413 197 53 38 chr2R 4431540 4431672 -16715036 + DNAREP1_DM LINE Penelope 182 315 -279 1 618 248 163 0 0 chr2R 4435941 4435984 -16710724 + DNAREP1_DM LINE Penelope 20 62 -532 1 618 22 0 0 0 chr2R 4439387 4439409 -16707299 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 28 61 0 0 chr2R 4440037 4440086 -16706622 + AT_rich Low_complexity Low_complexity 1 49 0 1 618 234 180 0 0 chr2R 4441664 4441714 -16704994 + (CCCCAA)n Simple_repeat Simple_repeat 5 54 0 1 618 24 0 0 0 chr2R 4444117 4444141 -16702567 + AT_rich Low_complexity Low_complexity 1 24 0 1 618 25 0 0 0 chr2R 4447502 4447527 -16699181 + AT_rich Low_complexity Low_complexity 1 25 0 1 618 271 207 17 0 chr2R 4447687 4447745 -16698963 + DNAREP1_DM LINE Penelope 536 594 0 1 618 23 33 0 0 chr2R 4448041 4448071 -16698637 + AT_rich Low_complexity Low_complexity 1 30 0 1 618 180 0 0 0 chr2R 4449449 4449469 -16697239 + (CGATG)n Simple_repeat Simple_repeat 5 24 0 1 618 231 36 0 0 chr2R 4451108 4451136 -16695572 + (CCTTG)n Simple_repeat Simple_repeat 1 28 0 1 618 6770 22 0 1 chr2R 4453593 4454381 -16692327 + PROTOP_A DNA P 1 787 -318 1 618 1007 0 0 0 chr2R 4454378 4454485 -16692223 + PROTOP_A DNA P 999 1105 0 1 619 24 0 0 0 chr2R 4459898 4459922 -16686786 + AT_rich Low_complexity Low_complexity 1 24 0 1 619 34 0 0 0 chr2R 4462915 4462949 -16683759 + AT_rich Low_complexity Low_complexity 1 34 0 1 619 270 0 0 0 chr2R 4472170 4472200 -16674508 + (TTTTA)n Simple_repeat Simple_repeat 4 33 0 1 619 420 225 165 30 chr2R 4474297 4474430 -16672278 + DNAREP1_DM LINE Penelope 389 539 -55 1 619 189 147 0 0 chr2R 4476359 4476393 -16670315 + (CCGAA)n Simple_repeat Simple_repeat 1 34 0 1 619 321 89 0 0 chr2R 4477856 4477901 -16668807 + (CTG)n Simple_repeat Simple_repeat 3 47 0 1 619 189 107 0 0 chr2R 4480982 4481010 -16665698 + (TCCGG)n Simple_repeat Simple_repeat 2 29 0 1 619 211 281 31 0 chr2R 4481882 4481978 -16664730 + (CTGGGG)n Simple_repeat Simple_repeat 1 99 0 1 619 212 309 24 0 chr2R 4482613 4482697 -16664011 + (CTG)n Simple_repeat Simple_repeat 1 86 0 1 619 29 0 0 0 chr2R 4488926 4488955 -16657753 + AT_rich Low_complexity Low_complexity 1 29 0 1 619 27 49 0 0 chr2R 4496135 4496176 -16650532 + AT_rich Low_complexity Low_complexity 1 41 0 1 619 27 0 0 0 chr2R 4496524 4496551 -16650157 + AT_rich Low_complexity Low_complexity 1 27 0 1 619 23 0 0 0 chr2R 4503352 4503375 -16643333 + AT_rich Low_complexity Low_complexity 1 23 0 1 619 208 231 0 19 chr2R 4506740 4506793 -16639915 + (CAG)n Simple_repeat Simple_repeat 1 52 0 1 619 220 0 0 79 chr2R 4506985 4507023 -16639685 + (CAG)n Simple_repeat Simple_repeat 3 37 0 1 619 271 224 0 0 chr2R 4509727 4509794 -16636914 + ROO_I LTR Pao 662 728 -7528 1 619 180 200 0 0 chr2R 4512210 4512250 -16634458 + (ATTCG)n Simple_repeat Simple_repeat 4 43 0 1 619 21 0 0 0 chr2R 4515296 4515317 -16631391 + AT_rich Low_complexity Low_complexity 1 21 0 1 619 323 259 57 49 chr2R 4519789 4519911 -16626797 + DNAREP1_DM LINE Penelope 368 490 -104 1 619 36 23 0 0 chr2R 4521302 4521345 -16625363 + AT_rich Low_complexity Low_complexity 1 43 0 1 619 231 218 0 0 chr2R 4521761 4521816 -16624892 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 619 224 232 0 0 chr2R 4521927 4521983 -16624725 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 1 619 182 130 65 0 chr2R 4522945 4522991 -16623717 + A-rich Low_complexity Low_complexity 2 50 0 1 619 180 182 0 0 chr2R 4523098 4523142 -16623566 + T-rich Low_complexity Low_complexity 1 44 0 1 619 201 226 0 36 chr2R 4525717 4525739 -16620969 + (ATGGTG)n Simple_repeat Simple_repeat 2 23 0 1 619 230 0 0 32 chr2R 4525739 4525770 -16620938 + (GGATG)n Simple_repeat Simple_repeat 5 34 0 1 619 201 226 0 36 chr2R 4525770 4525802 -16620906 + (ATGGTG)n Simple_repeat Simple_repeat 1 31 0 1 619 276 118 549 0 chr2R 4526244 4526346 -16620362 - DNAREP1_DM LINE Penelope -12 582 425 1 619 180 152 0 0 chr2R 4528444 4528477 -16618231 + (GGATG)n Simple_repeat Simple_repeat 3 35 0 1 619 252 86 0 0 chr2R 4528751 4528786 -16617922 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 619 216 0 0 0 chr2R 4529058 4529082 -16617626 + (CAT)n Simple_repeat Simple_repeat 1 24 0 1 619 224 156 0 43 chr2R 4531974 4532021 -16614687 + (CGAGT)n Simple_repeat Simple_repeat 3 47 0 1 619 205 231 0 55 chr2R 4533686 4533741 -16612967 + (TCCGG)n Simple_repeat Simple_repeat 3 54 0 1 619 24 0 0 0 chr2R 4534581 4534605 -16612103 + AT_rich Low_complexity Low_complexity 1 24 0 1 619 34 24 0 0 chr2R 4535895 4535936 -16610772 + AT_rich Low_complexity Low_complexity 1 41 0 1 619 25 31 0 0 chr2R 4537672 4537704 -16609004 + AT_rich Low_complexity Low_complexity 1 32 0 1 619 214 103 25 25 chr2R 4538471 4538511 -16608197 + (TTTCG)n Simple_repeat Simple_repeat 4 43 0 1 619 246 32 0 0 chr2R 4540229 4540260 -16606448 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 619 189 107 0 0 chr2R 4540397 4540425 -16606283 + (TCG)n Simple_repeat Simple_repeat 1 28 0 1 619 226 295 0 0 chr2R 4542944 4543022 -16603686 + A-rich Low_complexity Low_complexity 1 78 0 1 619 294 106 0 0 chr2R 4543278 4543325 -16603383 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 619 195 42 0 0 chr2R 4543578 4543602 -16603106 + (CGATA)n Simple_repeat Simple_repeat 1 24 0 1 619 186 43 0 0 chr2R 4544932 4544955 -16601753 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 619 267 31 0 0 chr2R 4550286 4550318 -16596390 + (TTAAA)n Simple_repeat Simple_repeat 5 36 0 1 619 27 0 0 0 chr2R 4552685 4552712 -16593996 + AT_rich Low_complexity Low_complexity 1 27 0 1 619 306 50 0 0 chr2R 4556364 4556404 -16590304 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 619 27 29 0 0 chr2R 4557363 4557397 -16589311 + AT_rich Low_complexity Low_complexity 1 34 0 1 619 180 111 0 0 chr2R 4557956 4557983 -16588725 + (CATA)n Simple_repeat Simple_repeat 3 29 0 1 619 23 33 0 0 chr2R 4562836 4562866 -16583842 + AT_rich Low_complexity Low_complexity 1 30 0 1 619 27 29 0 0 chr2R 4563092 4563126 -16583582 + AT_rich Low_complexity Low_complexity 1 34 0 1 619 266 106 0 21 chr2R 4565588 4565636 -16581072 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 619 30 45 0 0 chr2R 4570807 4570851 -16575857 + AT_rich Low_complexity Low_complexity 1 44 0 1 619 23 68 0 0 chr2R 4571578 4571622 -16575086 + AT_rich Low_complexity Low_complexity 1 44 0 1 619 24 0 0 0 chr2R 4572058 4572082 -16574626 + AT_rich Low_complexity Low_complexity 1 24 0 1 619 23 54 0 0 chr2R 4572100 4572137 -16574571 + AT_rich Low_complexity Low_complexity 1 37 0 1 619 46 54 0 0 chr2R 4573892 4573966 -16572742 + AT_rich Low_complexity Low_complexity 1 74 0 1 619 207 125 0 0 chr2R 4574419 4574459 -16572249 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 619 225 200 0 0 chr2R 4581159 4581199 -16565509 + DNAREP1_DM LINE Penelope 17 56 -538 1 620 33 43 0 0 chr2R 4588076 4588123 -16558585 + AT_rich Low_complexity Low_complexity 1 47 0 1 620 189 0 0 0 chr2R 4592001 4592022 -16554686 + (TAATG)n Simple_repeat Simple_repeat 5 25 0 1 620 222 189 0 0 chr2R 4593541 4593578 -16553130 + (CGGA)n Simple_repeat Simple_repeat 3 39 0 1 620 29 0 0 0 chr2R 4598829 4598858 -16547850 + AT_rich Low_complexity Low_complexity 1 29 0 1 620 23 0 0 0 chr2R 4600638 4600661 -16546047 + AT_rich Low_complexity Low_complexity 1 23 0 1 620 337 152 0 29 chr2R 4602511 4602579 -16544129 + DNAREP1_DM LINE Penelope 509 574 -20 1 620 21 0 0 0 chr2R 4602881 4602902 -16543806 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 305 198 68 43 chr2R 4603781 4603898 -16542810 - DNAREP1_DM LINE Penelope -129 465 304 1 620 1711 0 0 0 chr2R 4610321 4610507 -16536201 + POGON1 DNA Pogo 1 186 0 1 620 192 163 0 0 chr2R 4611047 4611090 -16535618 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 620 22 0 0 0 chr2R 4611575 4611597 -16535111 + AT_rich Low_complexity Low_complexity 1 22 0 1 620 30 0 0 0 chr2R 4621230 4621260 -16525448 + AT_rich Low_complexity Low_complexity 1 30 0 1 620 26 64 0 0 chr2R 4622113 4622160 -16524548 + AT_rich Low_complexity Low_complexity 1 47 0 1 620 258 219 0 0 chr2R 4626889 4626953 -16519755 + (CAAAT)n Simple_repeat Simple_repeat 3 66 0 1 620 240 35 0 0 chr2R 4627781 4627810 -16518898 + (CCGAA)n Simple_repeat Simple_repeat 3 31 0 1 620 219 88 0 0 chr2R 4628097 4628131 -16518577 + (CAGC)n Simple_repeat Simple_repeat 1 34 0 1 620 195 42 0 0 chr2R 4628768 4628792 -16517916 + (CGAT)n Simple_repeat Simple_repeat 2 25 0 1 620 219 88 0 0 chr2R 4629779 4629813 -16516895 + (CACTC)n Simple_repeat Simple_repeat 4 37 0 1 620 27 29 0 0 chr2R 4630583 4630617 -16516091 + AT_rich Low_complexity Low_complexity 1 34 0 1 620 205 118 19 19 chr2R 4631434 4631486 -16515222 + (CATCC)n Simple_repeat Simple_repeat 5 56 0 1 620 21 0 0 0 chr2R 4636055 4636076 -16510632 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 22 0 0 0 chr2R 4637722 4637744 -16508964 + GC_rich Low_complexity Low_complexity 1 22 0 1 620 186 43 0 0 chr2R 4639671 4639694 -16507014 + (GCCTG)n Simple_repeat Simple_repeat 5 27 0 1 620 22 0 0 0 chr2R 4641819 4641841 -16504867 + AT_rich Low_complexity Low_complexity 1 22 0 1 620 201 281 0 0 chr2R 4642315 4642379 -16504329 + GA-rich Low_complexity Low_complexity 3 66 0 1 620 223 241 0 0 chr2R 4643349 4643407 -16503301 + (CAGT)n Simple_repeat Simple_repeat 3 60 0 1 620 224 233 0 32 chr2R 4643588 4643650 -16503058 + (CTG)n Simple_repeat Simple_repeat 3 62 0 1 620 33 0 0 0 chr2R 4647049 4647082 -16499626 + AT_rich Low_complexity Low_complexity 1 33 0 1 620 24 0 0 0 chr2R 4647167 4647191 -16499517 + AT_rich Low_complexity Low_complexity 1 24 0 1 620 21 0 0 0 chr2R 4648890 4648911 -16497797 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 222 62 0 0 chr2R 4655157 4655189 -16491519 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 620 210 71 0 0 chr2R 4657410 4657438 -16489270 + (CAGTT)n Simple_repeat Simple_repeat 3 30 0 1 620 24 32 0 0 chr2R 4658981 4659012 -16487696 + AT_rich Low_complexity Low_complexity 1 31 0 1 620 200 261 0 0 chr2R 4662728 4662774 -16483934 + (TCCG)n Simple_repeat Simple_repeat 4 49 0 1 620 300 102 0 0 chr2R 4664444 4664493 -16482215 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 620 2055 0 0 0 chr2R 4665492 4665716 -16480992 - DIVER_LTR LTR Pao 0 224 1 1 620 47824 1 0 0 chr2R 4665716 4671359 -16475349 - DIVER_I LTR Pao 0 5643 1 1 620 1963 0 0 0 chr2R 4671380 4671604 -16475104 - DIVER_LTR LTR Pao 0 224 1 1 620 25 0 0 0 chr2R 4672736 4672761 -16473947 + AT_rich Low_complexity Low_complexity 1 25 0 1 620 269 244 0 25 chr2R 4676146 4676226 -16470482 + (CAA)n Simple_repeat Simple_repeat 1 78 0 1 620 205 100 65 32 chr2R 4678217 4678279 -16468429 + (TTGG)n Simple_repeat Simple_repeat 3 66 0 1 620 25 51 0 0 chr2R 4679653 4679692 -16467016 + AT_rich Low_complexity Low_complexity 1 39 0 1 620 29 0 0 0 chr2R 4682346 4682375 -16464333 + AT_rich Low_complexity Low_complexity 1 29 0 1 620 234 204 19 0 chr2R 4683512 4683566 -16463142 + GA-rich Low_complexity Low_complexity 1 55 0 1 620 21 0 0 0 chr2R 4684199 4684220 -16462488 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 21 89 0 0 chr2R 4685441 4685497 -16461211 + AT_rich Low_complexity Low_complexity 1 56 0 1 620 207 176 39 0 chr2R 4685629 4685680 -16461028 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 1 620 438 120 0 0 chr2R 4686577 4686652 -16460056 + (CAG)n Simple_repeat Simple_repeat 3 77 0 1 620 210 71 0 0 chr2R 4689984 4690012 -16456696 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 620 198 0 0 0 chr2R 4690119 4690141 -16456567 + (CGG)n Simple_repeat Simple_repeat 3 24 0 1 620 185 65 32 0 chr2R 4696153 4696184 -16450524 + (GAGTG)n Simple_repeat Simple_repeat 2 33 0 1 620 279 0 0 0 chr2R 4701378 4701409 -16445299 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 620 202 292 0 0 chr2R 4702026 4702091 -16444617 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 620 213 39 0 0 chr2R 4702360 4702386 -16444322 + (TAAAA)n Simple_repeat Simple_repeat 5 30 0 1 620 342 0 0 0 chr2R 4703109 4703147 -16443561 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 620 25 0 0 0 chr2R 4716174 4716199 -16430509 + AT_rich Low_complexity Low_complexity 1 25 0 1 620 183 204 0 0 chr2R 4716630 4716684 -16430024 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 621 203 133 0 0 chr2R 4720542 4720572 -16426136 + (TGG)n Simple_repeat Simple_repeat 3 32 0 1 621 275 49 0 24 chr2R 4722607 4722649 -16424059 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1 621 212 59 0 29 chr2R 4729890 4729925 -16416783 + (CAGAC)n Simple_repeat Simple_repeat 5 38 0 1 621 205 300 14 0 chr2R 4732238 4732308 -16414400 + GA-rich Low_complexity Low_complexity 1 71 0 1 621 429 66 0 0 chr2R 4739822 4739883 -16406825 + (CAG)n Simple_repeat Simple_repeat 1 61 0 1 621 180 125 0 0 chr2R 4740133 4740165 -16406543 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 621 29 28 0 0 chr2R 4740992 4741028 -16405680 + AT_rich Low_complexity Low_complexity 1 36 0 1 621 244 287 35 91 chr2R 4752835 4753034 -16393674 - DNAREP1_DM LINE Penelope -10 584 397 1 621 30 0 0 0 chr2R 4759946 4759976 -16386732 + AT_rich Low_complexity Low_complexity 1 30 0 1 621 209 259 0 0 chr2R 4769042 4769096 -16377612 + GA-rich Low_complexity Low_complexity 5 58 0 1 621 195 220 0 0 chr2R 4776332 4776382 -16370326 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 621 22 0 0 0 chr2R 4780885 4780907 -16365801 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 30 59 0 0 chr2R 4794830 4794881 -16351827 + AT_rich Low_complexity Low_complexity 1 51 0 1 621 24 0 0 0 chr2R 4801917 4801941 -16344767 + AT_rich Low_complexity Low_complexity 1 24 0 1 621 21 0 0 0 chr2R 4805226 4805247 -16341461 + AT_rich Low_complexity Low_complexity 1 21 0 1 621 31 0 0 0 chr2R 4809044 4809075 -16337633 + AT_rich Low_complexity Low_complexity 1 31 0 1 621 216 143 0 0 chr2R 4811985 4812027 -16334681 + (CAG)n Simple_repeat Simple_repeat 3 44 0 1 621 191 36 36 0 chr2R 4828801 4828829 -16317879 + (CTATA)n Simple_repeat Simple_repeat 1 29 0 1 621 28 29 0 0 chr2R 4830043 4830078 -16316630 + AT_rich Low_complexity Low_complexity 1 35 0 1 621 25 0 0 0 chr2R 4835203 4835228 -16311480 + AT_rich Low_complexity Low_complexity 1 25 0 1 621 21 0 0 0 chr2R 4835473 4835494 -16311214 + AT_rich Low_complexity Low_complexity 1 21 0 1 621 214 282 0 0 chr2R 4842975 4843046 -16303662 + (CAG)n Simple_repeat Simple_repeat 3 73 0 1 621 226 234 31 15 chr2R 4843635 4843700 -16303008 + T-rich Low_complexity Low_complexity 1 66 0 1 621 25 51 0 0 chr2R 4845026 4845065 -16301643 + AT_rich Low_complexity Low_complexity 1 39 0 1 621 231 196 0 0 chr2R 4845551 4845597 -16301111 + GA-rich Low_complexity Low_complexity 1 46 0 1 621 24 32 0 0 chr2R 4848379 4848410 -16298298 + AT_rich Low_complexity Low_complexity 1 31 0 1 621 203 136 22 22 chr2R 4849047 4849092 -16297616 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 622 27 0 0 0 chr2R 4849933 4849960 -16296748 + AT_rich Low_complexity Low_complexity 1 27 0 1 622 25 51 0 0 chr2R 4850548 4850587 -16296121 + AT_rich Low_complexity Low_complexity 1 39 0 1 622 277 281 11 11 chr2R 4851588 4851678 -16295030 + P_DG DNA P 2792 2881 -7 1 622 270 200 86 12 chr2R 4854803 4854884 -16291824 - DNAREP1_DM LINE Penelope -137 457 371 1 622 273 75 0 0 chr2R 4865943 4865983 -16280725 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 622 2322 133 0 0 chr2R 4866636 4866982 -16279726 - DMRP1 Unknown Unknown 0 346 1 1 622 29 28 0 0 chr2R 4868315 4868351 -16278357 + AT_rich Low_complexity Low_complexity 1 36 0 1 622 22 0 0 0 chr2R 4868411 4868433 -16278275 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 213 167 0 0 chr2R 4870707 4870761 -16275947 + (GTTTG)n Simple_repeat Simple_repeat 3 56 0 1 622 288 231 0 0 chr2R 4872530 4872608 -16274100 + (TTG)n Simple_repeat Simple_repeat 1 78 0 1 622 230 231 0 19 chr2R 4873272 4873325 -16273383 - ROO_I LTR Pao -7576 680 629 1 622 231 211 10 135 chr2R 4873452 4873556 -16273152 - ROO_I LTR Pao -7507 749 659 1 622 29 47 0 0 chr2R 4873734 4873777 -16272931 + AT_rich Low_complexity Low_complexity 1 43 0 1 622 21 0 0 0 chr2R 4879226 4879247 -16267461 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 23 54 0 0 chr2R 4879686 4879723 -16266985 + AT_rich Low_complexity Low_complexity 1 37 0 1 622 180 0 0 0 chr2R 4880795 4880815 -16265893 + (CTAGG)n Simple_repeat Simple_repeat 2 21 0 1 622 200 125 0 24 chr2R 4883175 4883216 -16263492 + (CTG)n Simple_repeat Simple_repeat 3 42 0 1 622 236 260 0 0 chr2R 4883849 4883922 -16262786 + (TTG)n Simple_repeat Simple_repeat 3 75 0 1 622 210 37 0 0 chr2R 4883952 4883979 -16262729 + (TTG)n Simple_repeat Simple_repeat 3 29 0 1 622 250 252 16 16 chr2R 4884484 4884609 -16262099 + (TGG)n Simple_repeat Simple_repeat 3 127 0 1 622 221 170 0 21 chr2R 4889938 4889986 -16256722 + (TTCTG)n Simple_repeat Simple_repeat 4 50 0 1 622 23 0 0 0 chr2R 4891004 4891027 -16255681 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 232 264 0 14 chr2R 4892746 4892819 -16253889 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 622 21 0 0 0 chr2R 4898186 4898207 -16248501 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 24 77 0 0 chr2R 4902261 4902313 -16244395 + AT_rich Low_complexity Low_complexity 1 52 0 1 622 183 42 0 0 chr2R 4904843 4904867 -16241841 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 622 201 39 0 0 chr2R 4908132 4908158 -16238550 + (CGAGT)n Simple_repeat Simple_repeat 2 27 0 1 622 213 242 32 0 chr2R 4911328 4911390 -16235318 + (ATGGTG)n Simple_repeat Simple_repeat 1 64 0 1 622 23 33 0 0 chr2R 4911942 4911972 -16234736 + AT_rich Low_complexity Low_complexity 1 30 0 1 622 225 83 0 0 chr2R 4913604 4913640 -16233068 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 622 21 0 0 0 chr2R 4914251 4914272 -16232436 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 219 114 0 0 chr2R 4914747 4914782 -16231926 + (CCA)n Simple_repeat Simple_repeat 2 36 0 1 622 237 65 0 0 chr2R 4915143 4915174 -16231534 + (CAG)n Simple_repeat Simple_repeat 3 33 0 1 622 183 42 0 0 chr2R 4916781 4916805 -16229903 + (T)n Simple_repeat Simple_repeat 1 24 0 1 622 238 266 13 0 chr2R 4918060 4918139 -16228569 + ROO_I LTR Pao 676 755 -7501 1 622 211 229 0 0 chr2R 4919383 4919431 -16227277 + A-rich Low_complexity Low_complexity 1 48 0 1 622 30 77 0 0 chr2R 4920435 4920500 -16226208 + AT_rich Low_complexity Low_complexity 1 65 0 1 622 184 114 68 0 chr2R 4921087 4921131 -16225577 + (CACAC)n Simple_repeat Simple_repeat 5 51 0 1 622 240 35 0 0 chr2R 4924409 4924438 -16222270 + (TGGA)n Simple_repeat Simple_repeat 2 30 0 1 622 249 83 0 0 chr2R 4935867 4935903 -16210805 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 1 622 29 0 0 0 chr2R 4937823 4937852 -16208856 + AT_rich Low_complexity Low_complexity 1 29 0 1 622 277 242 0 0 chr2R 4938527 4938626 -16208082 - ROO_I LTR Pao -7514 742 644 1 622 440 198 21 0 chr2R 4939088 4939184 -16207524 + DNAREP1_DM LINE Penelope 497 594 0 1 622 219 103 0 0 chr2R 4941815 4941854 -16204854 + (GGTTG)n Simple_repeat Simple_repeat 4 42 0 1 622 24 77 0 0 chr2R 4941960 4942012 -16204696 + AT_rich Low_complexity Low_complexity 1 52 0 1 622 213 39 0 0 chr2R 4943911 4943937 -16202771 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 622 260 158 0 17 chr2R 4944331 4944389 -16202319 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 622 216 153 13 77 chr2R 4946918 4946996 -16199712 + (TTTAG)n Simple_repeat Simple_repeat 1 73 0 1 622 23 0 0 0 chr2R 4952702 4952725 -16193983 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 450 94 0 0 chr2R 4953186 4953250 -16193458 + (CAGC)n Simple_repeat Simple_repeat 1 64 0 1 622 216 0 0 0 chr2R 4954963 4954987 -16191721 + (CACAC)n Simple_repeat Simple_repeat 5 28 0 1 622 22 0 0 0 chr2R 4956312 4956334 -16190374 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 192 40 0 0 chr2R 4957158 4957183 -16189525 + (A)n Simple_repeat Simple_repeat 1 25 0 1 622 267 172 0 86 chr2R 4958978 4959048 -16187660 - ROO_I LTR Pao -7534 722 659 1 622 22 0 0 0 chr2R 4959405 4959427 -16187281 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 197 200 0 32 chr2R 4959598 4959660 -16187048 + (CAGAGA)n Simple_repeat Simple_repeat 4 63 0 1 622 304 247 0 12 chr2R 4959810 4959892 -16186816 + (CAGC)n Simple_repeat Simple_repeat 3 83 0 1 622 23 0 0 0 chr2R 4961537 4961560 -16185148 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 202 216 0 0 chr2R 4962437 4962488 -16184220 + (CAG)n Simple_repeat Simple_repeat 2 52 0 1 622 27 29 0 0 chr2R 4963778 4963812 -16182896 + AT_rich Low_complexity Low_complexity 1 34 0 1 622 200 172 17 0 chr2R 4964208 4964266 -16182442 + (CACCAT)n Simple_repeat Simple_repeat 1 59 0 1 622 30 59 0 0 chr2R 4965626 4965677 -16181031 + AT_rich Low_complexity Low_complexity 1 51 0 1 622 47 19 0 0 chr2R 4965738 4965792 -16180916 + AT_rich Low_complexity Low_complexity 1 54 0 1 622 23 0 0 0 chr2R 4965877 4965900 -16180808 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 229 250 0 0 chr2R 4967558 4967610 -16179098 - DNAREP1_DM LINE Penelope -542 52 1 1 622 24 32 0 0 chr2R 4975159 4975190 -16171518 + AT_rich Low_complexity Low_complexity 1 31 0 1 622 28 29 0 0 chr2R 4975233 4975268 -16171440 + AT_rich Low_complexity Low_complexity 1 35 0 1 622 25 0 0 0 chr2R 4976769 4976794 -16169914 + AT_rich Low_complexity Low_complexity 1 25 0 1 623 285 79 958 0 chr2R 4982216 4982288 -16164420 - DNAREP1_DM LINE Penelope 0 594 454 1 623 502 213 173 0 chr2R 4982293 4982443 -16164265 - DNAREP1_DM LINE Penelope -389 205 30 1 623 23 54 0 0 chr2R 4982466 4982503 -16164205 + AT_rich Low_complexity Low_complexity 1 37 0 1 623 23 0 0 0 chr2R 4982821 4982844 -16163864 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 31 26 0 0 chr2R 4983150 4983188 -16163520 + AT_rich Low_complexity Low_complexity 1 38 0 1 623 22 35 0 0 chr2R 4983961 4983990 -16162718 + AT_rich Low_complexity Low_complexity 1 29 0 1 623 21 0 0 0 chr2R 4986075 4986096 -16160612 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 41 36 0 0 chr2R 4986769 4986824 -16159884 + AT_rich Low_complexity Low_complexity 1 55 0 1 623 219 273 0 0 chr2R 4991148 4991203 -16155505 + (CGG)n Simple_repeat Simple_repeat 1 55 0 1 623 24 32 0 0 chr2R 4997264 4997295 -16149413 + AT_rich Low_complexity Low_complexity 1 31 0 1 623 21 0 0 0 chr2R 4997721 4997742 -16148966 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 386 289 0 0 chr2R 4999664 4999785 -16146923 + (CAT)n Simple_repeat Simple_repeat 2 122 0 1 623 44 63 0 0 chr2R 5001505 5001584 -16145124 + AT_rich Low_complexity Low_complexity 1 79 0 1 623 201 244 22 0 chr2R 5007710 5007755 -16138953 + CT-rich Low_complexity Low_complexity 1 46 0 1 623 221 178 0 22 chr2R 5007858 5007904 -16138804 + (CAG)n Simple_repeat Simple_repeat 2 46 0 1 623 23 0 0 0 chr2R 5015399 5015422 -16131286 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 26 0 0 0 chr2R 5019596 5019622 -16127086 + AT_rich Low_complexity Low_complexity 1 26 0 1 623 24 77 0 0 chr2R 5019743 5019795 -16126913 + AT_rich Low_complexity Low_complexity 1 52 0 1 623 252 0 0 0 chr2R 5022562 5022590 -16124118 + (CGGT)n Simple_repeat Simple_repeat 2 29 0 1 623 22 35 0 0 chr2R 5032622 5032651 -16114057 + AT_rich Low_complexity Low_complexity 1 29 0 1 623 2489 0 0 4 chr2R 5038861 5039137 -16107571 + BURDOCK_LTR LTR Gypsy 1 275 0 1 623 53997 2 0 0 chr2R 5039137 5044997 -16101711 + BURDOCK_I LTR Gypsy 1 5860 0 1 623 2489 0 0 4 chr2R 5044998 5045274 -16101434 + BURDOCK_LTR LTR Gypsy 1 275 0 1 623 25 31 0 0 chr2R 5045393 5045425 -16101283 + AT_rich Low_complexity Low_complexity 1 32 0 1 623 256 147 221 0 chr2R 5045480 5045548 -16101160 + DNAREP1_DM LINE Penelope 5 87 -507 1 623 491 120 0 83 chr2R 5045710 5045819 -16100889 + DNAREP1_DM LINE Penelope 495 594 0 1 623 21 36 0 0 chr2R 5052645 5052673 -16094035 + AT_rich Low_complexity Low_complexity 1 28 0 1 623 180 0 0 0 chr2R 5069558 5069578 -16077130 + (TATG)n Simple_repeat Simple_repeat 1 20 0 1 623 21 36 0 0 chr2R 5069758 5069786 -16076922 + AT_rich Low_complexity Low_complexity 1 28 0 1 623 22 35 0 0 chr2R 5074112 5074141 -16072567 + AT_rich Low_complexity Low_complexity 1 29 0 1 623 207 218 0 0 chr2R 5079153 5079208 -16067500 + (CTG)n Simple_repeat Simple_repeat 2 56 0 1 623 38 0 0 0 chr2R 5079770 5079808 -16066900 + AT_rich Low_complexity Low_complexity 1 38 0 1 623 23 33 0 0 chr2R 5084214 5084244 -16062464 + AT_rich Low_complexity Low_complexity 1 30 0 1 623 528 266 54 84 chr2R 5085716 5086012 -16060696 - M4DM DNA Transib -262 1173 887 1 623 22 35 0 0 chr2R 5089777 5089806 -16056902 + AT_rich Low_complexity Low_complexity 1 29 0 1 623 24 0 0 0 chr2R 5090485 5090509 -16056199 + AT_rich Low_complexity Low_complexity 1 24 0 1 623 207 200 0 0 chr2R 5096952 5096992 -16049716 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 623 4005 0 0 0 chr2R 5100253 5100681 -16046027 + ROO_LTR LTR Pao 1 428 0 1 623 291 54 0 0 chr2R 5103525 5103562 -16043146 + (CTG)n Simple_repeat Simple_repeat 2 38 0 1 623 22 0 0 0 chr2R 5104879 5104901 -16041807 + AT_rich Low_complexity Low_complexity 1 22 0 1 623 209 231 0 0 chr2R 5107400 5107439 -16039269 + (CAATC)n Simple_repeat Simple_repeat 1 39 0 1 623 215 211 0 37 chr2R 5109650 5109704 -16037004 + (CATATA)n Simple_repeat Simple_repeat 6 57 0 1 623 437 117 0 0 chr2R 5110130 5110190 -16036518 + DNAREP1_DM LINE Penelope 1 60 -534 1 623 237 254 0 14 chr2R 5110235 5110307 -16036401 + DNAREP1_DM LINE Penelope 521 591 -3 1 623 23 0 0 0 chr2R 5110436 5110459 -16036249 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 213 261 0 0 chr2R 5110698 5110744 -16035964 + (TCCG)n Simple_repeat Simple_repeat 1 46 0 1 624 284 306 0 0 chr2R 5115027 5115125 -16031583 + (CTG)n Simple_repeat Simple_repeat 3 100 0 1 624 195 129 0 0 chr2R 5118254 5118285 -16028423 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 624 210 37 0 0 chr2R 5118912 5118939 -16027769 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 624 324 83 0 0 chr2R 5119152 5119200 -16027508 + (TGG)n Simple_repeat Simple_repeat 3 50 0 1 624 192 40 0 0 chr2R 5120153 5120178 -16026530 + (TCC)n Simple_repeat Simple_repeat 2 26 0 1 624 29 0 0 0 chr2R 5121579 5121608 -16025100 + AT_rich Low_complexity Low_complexity 1 29 0 1 624 312 195 126 0 chr2R 5124548 5124635 -16022073 + DNAREP1_DM LINE Penelope 17 114 -480 1 624 21 0 0 0 chr2R 5129643 5129664 -16017044 + AT_rich Low_complexity Low_complexity 1 21 0 1 624 21 104 0 0 chr2R 5133470 5133547 -16013161 + AT_rich Low_complexity Low_complexity 1 77 0 1 624 201 138 0 0 chr2R 5134620 5134649 -16012059 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 624 24 32 0 0 chr2R 5139385 5139416 -16007292 + AT_rich Low_complexity Low_complexity 1 31 0 1 624 242 289 0 0 chr2R 5145349 5145446 -16001262 + (CTG)n Simple_repeat Simple_repeat 3 99 0 1 624 210 229 0 32 chr2R 5150453 5150516 -15996192 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 624 206 62 31 0 chr2R 5151289 5151321 -15995387 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1 624 25 0 0 0 chr2R 5153728 5153753 -15992955 + AT_rich Low_complexity Low_complexity 1 25 0 1 624 212 162 0 0 chr2R 5157867 5157904 -15988804 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 624 192 217 0 0 chr2R 5159827 5159873 -15986835 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 624 22 35 0 0 chr2R 5161473 5161502 -15985206 + AT_rich Low_complexity Low_complexity 1 29 0 1 624 21 0 0 0 chr2R 5161746 5161767 -15984941 + AT_rich Low_complexity Low_complexity 1 21 0 1 624 29 0 0 0 chr2R 5166716 5166745 -15979963 + AT_rich Low_complexity Low_complexity 1 29 0 1 624 215 234 0 0 chr2R 5171285 5171332 -15975376 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 624 28 48 0 0 chr2R 5174221 5174263 -15972445 + AT_rich Low_complexity Low_complexity 1 42 0 1 624 201 226 0 36 chr2R 5179983 5180038 -15966670 + GA-rich Low_complexity Low_complexity 1 53 0 1 624 27 0 0 0 chr2R 5180741 5180768 -15965940 + AT_rich Low_complexity Low_complexity 1 27 0 1 624 198 0 0 0 chr2R 5184251 5184273 -15962435 + (GCTG)n Simple_repeat Simple_repeat 4 25 0 1 624 180 135 0 0 chr2R 5185912 5185949 -15960759 + (CGG)n Simple_repeat Simple_repeat 3 39 0 1 624 234 180 0 0 chr2R 5186866 5186927 -15959781 + GA-rich Low_complexity Low_complexity 3 63 0 1 624 188 189 0 36 chr2R 5187093 5187148 -15959560 + (CATA)n Simple_repeat Simple_repeat 4 56 0 1 624 204 214 0 0 chr2R 5189431 5189473 -15957235 + CT-rich Low_complexity Low_complexity 2 43 0 1 624 269 89 22 0 chr2R 5189932 5189977 -15956731 + (CAAAA)n Simple_repeat Simple_repeat 4 49 0 1 624 207 191 0 0 chr2R 5190136 5190183 -15956525 + A-rich Low_complexity Low_complexity 1 47 0 1 624 24 32 0 0 chr2R 5193406 5193437 -15953271 + AT_rich Low_complexity Low_complexity 1 31 0 1 624 21 71 0 0 chr2R 5193715 5193757 -15952951 + AT_rich Low_complexity Low_complexity 1 42 0 1 624 275 286 0 0 chr2R 5195182 5195259 -15951449 + G-rich Low_complexity Low_complexity 6 82 0 1 624 28 0 0 0 chr2R 5199431 5199459 -15947249 + AT_rich Low_complexity Low_complexity 1 28 0 1 624 237 146 0 0 chr2R 5201306 5201354 -15945354 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 624 212 259 0 0 chr2R 5203386 5203440 -15943268 + (TTG)n Simple_repeat Simple_repeat 1 54 0 1 624 201 154 0 0 chr2R 5203713 5203752 -15942956 + (CCTG)n Simple_repeat Simple_repeat 3 41 0 1 624 438 88 0 0 chr2R 5206996 5207064 -15939644 + (TTG)n Simple_repeat Simple_repeat 1 68 0 1 624 299 161 9 35 chr2R 5207533 5207649 -15939059 + (CTG)n Simple_repeat Simple_repeat 1 113 0 1 624 195 42 0 0 chr2R 5208485 5208509 -15938199 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 624 245 219 0 50 chr2R 5208564 5208665 -15938043 + T-rich Low_complexity Low_complexity 5 100 0 1 624 213 39 0 0 chr2R 5212775 5212801 -15933907 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 624 22 0 0 0 chr2R 5213010 5213032 -15933676 + AT_rich Low_complexity Low_complexity 1 22 0 1 624 220 296 14 0 chr2R 5215691 5215762 -15930946 + (CACCC)n Simple_repeat Simple_repeat 3 74 0 1 624 198 143 0 0 chr2R 5220339 5220374 -15926334 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 624 208 121 0 0 chr2R 5223329 5223362 -15923346 + (TCC)n Simple_repeat Simple_repeat 2 34 0 1 624 22 0 0 0 chr2R 5223527 5223549 -15923159 + AT_rich Low_complexity Low_complexity 1 22 0 1 624 225 0 0 0 chr2R 5228852 5228877 -15917831 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 624 249 258 0 0 chr2R 5230092 5230154 -15916554 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 624 212 224 20 0 chr2R 5232598 5232647 -15914061 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 1 624 23 54 0 0 chr2R 5236197 5236234 -15910474 + AT_rich Low_complexity Low_complexity 1 37 0 1 624 31 0 0 0 chr2R 5237192 5237223 -15909485 + AT_rich Low_complexity Low_complexity 1 31 0 1 624 3964 2 0 2 chr2R 5239784 5240213 -15906495 - ROO_LTR LTR Pao 0 428 1 1 9 74775 0 3 0 chr2R 5240213 5248446 -15898262 - ROO_I LTR Pao 0 8256 1 1 625 3964 2 0 2 chr2R 5248446 5248875 -15897833 - ROO_LTR LTR Pao 0 428 1 1 625 206 128 0 25 chr2R 5249235 5249275 -15897433 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 625 25 0 0 0 chr2R 5251792 5251817 -15894891 + AT_rich Low_complexity Low_complexity 1 25 0 1 625 21 0 0 0 chr2R 5254919 5254940 -15891768 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 21 0 0 0 chr2R 5258110 5258131 -15888577 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 208 217 0 0 chr2R 5260483 5260529 -15886179 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 625 273 29 0 0 chr2R 5264302 5264336 -15882372 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 625 28 48 0 0 chr2R 5264972 5265014 -15881694 + AT_rich Low_complexity Low_complexity 1 42 0 1 625 23 33 0 0 chr2R 5266323 5266353 -15880355 + AT_rich Low_complexity Low_complexity 1 30 0 1 625 216 175 0 0 chr2R 5268777 5268817 -15877891 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 625 218 200 22 0 chr2R 5268906 5268951 -15877757 + (TGGA)n Simple_repeat Simple_repeat 2 47 0 1 625 22 88 0 0 chr2R 5269315 5269372 -15877336 + AT_rich Low_complexity Low_complexity 1 57 0 1 625 200 35 35 0 chr2R 5270176 5270205 -15876503 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 625 224 231 15 0 chr2R 5270478 5270543 -15876165 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 625 207 0 0 0 chr2R 5270708 5270731 -15875977 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 625 25 31 0 0 chr2R 5270966 5270998 -15875710 + AT_rich Low_complexity Low_complexity 1 32 0 1 625 21 0 0 0 chr2R 5271012 5271033 -15875675 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 232 178 0 22 chr2R 5273206 5273252 -15873456 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 625 26 30 0 0 chr2R 5274715 5274748 -15871960 + AT_rich Low_complexity Low_complexity 1 33 0 1 625 23 0 0 0 chr2R 5275534 5275557 -15871151 + AT_rich Low_complexity Low_complexity 1 23 0 1 625 278 203 14 0 chr2R 5277501 5277570 -15869138 + CT-rich Low_complexity Low_complexity 1 70 0 1 625 30 0 0 0 chr2R 5286473 5286503 -15860205 + AT_rich Low_complexity Low_complexity 1 30 0 1 625 394 185 216 46 chr2R 5288866 5289019 -15857689 + DNAREP1_DM LINE Penelope 396 574 -20 1 625 217 217 0 0 chr2R 5294338 5294384 -15852324 + (TCTCTG)n Simple_repeat Simple_repeat 1 46 0 1 625 25 0 0 0 chr2R 5297710 5297735 -15848973 + AT_rich Low_complexity Low_complexity 1 25 0 1 625 26 0 0 0 chr2R 5301278 5301304 -15845404 + AT_rich Low_complexity Low_complexity 1 26 0 1 625 204 40 0 0 chr2R 5306317 5306342 -15840366 + (T)n Simple_repeat Simple_repeat 1 25 0 1 625 391 174 0 0 chr2R 5308382 5308451 -15838257 + DNAREP1_DM LINE Penelope 2 70 -524 1 625 32 98 0 0 chr2R 5311236 5311338 -15835370 + AT_rich Low_complexity Low_complexity 1 102 0 1 625 48 53 0 0 chr2R 5313669 5313745 -15832963 + AT_rich Low_complexity Low_complexity 1 76 0 1 625 234 193 24 24 chr2R 5318862 5318947 -15827761 + A-rich Low_complexity Low_complexity 5 89 0 1 625 24 0 0 0 chr2R 5320805 5320829 -15825879 + AT_rich Low_complexity Low_complexity 1 24 0 1 625 183 139 0 0 chr2R 5321224 5321260 -15825448 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 625 23 33 0 0 chr2R 5322528 5322558 -15824150 + AT_rich Low_complexity Low_complexity 1 30 0 1 625 226 323 20 10 chr2R 5325015 5325115 -15821593 + (CTG)n Simple_repeat Simple_repeat 2 102 0 1 625 26 30 0 0 chr2R 5327211 5327244 -15819464 + AT_rich Low_complexity Low_complexity 1 33 0 1 625 314 123 0 17 chr2R 5328926 5328984 -15817724 + (CAA)n Simple_repeat Simple_repeat 3 59 0 1 625 28 48 0 0 chr2R 5329410 5329452 -15817256 + AT_rich Low_complexity Low_complexity 1 42 0 1 625 202 234 0 21 chr2R 5332228 5332276 -15814432 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 625 290 116 0 0 chr2R 5333056 5333099 -15813609 - DNAREP1_DM LINE Penelope -13 581 539 1 625 208 128 0 49 chr2R 5334162 5334203 -15812505 + T-rich Low_complexity Low_complexity 2 40 0 1 625 24 0 0 0 chr2R 5334612 5334636 -15812072 + AT_rich Low_complexity Low_complexity 1 24 0 1 625 21 0 0 0 chr2R 5335111 5335132 -15811576 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 192 135 0 0 chr2R 5336732 5336769 -15809939 + (CAG)n Simple_repeat Simple_repeat 3 39 0 1 625 207 0 0 0 chr2R 5336989 5337012 -15809696 + (CAG)n Simple_repeat Simple_repeat 3 25 0 1 625 183 80 0 0 chr2R 5337716 5337741 -15808967 + (CAG)n Simple_repeat Simple_repeat 2 26 0 1 625 21 0 0 0 chr2R 5339198 5339219 -15807489 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 467 208 458 36 chr2R 5340314 5340576 -15806132 + DNAREP1_DM LINE Penelope 94 589 -5 1 625 36 53 0 0 chr2R 5340776 5340833 -15805875 + AT_rich Low_complexity Low_complexity 1 57 0 1 625 23 33 0 0 chr2R 5341667 5341697 -15805011 + AT_rich Low_complexity Low_complexity 1 30 0 1 625 24 53 0 0 chr2R 5343380 5343418 -15803290 + AT_rich Low_complexity Low_complexity 1 38 0 1 625 180 0 0 0 chr2R 5344656 5344676 -15802032 + (TATATG)n Simple_repeat Simple_repeat 2 21 0 1 625 226 209 0 85 chr2R 5345812 5345906 -15800802 + ROO_I LTR Pao 641 726 -7530 1 625 210 160 0 0 chr2R 5345919 5345969 -15800739 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 625 288 133 0 0 chr2R 5346056 5346116 -15800592 + (CAG)n Simple_repeat Simple_repeat 3 62 0 1 625 198 103 0 0 chr2R 5346117 5346146 -15800562 + (CACCAT)n Simple_repeat Simple_repeat 1 29 0 1 625 246 62 0 0 chr2R 5348800 5348832 -15797876 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 625 297 0 0 0 chr2R 5350939 5350972 -15795736 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 625 180 77 0 0 chr2R 5358149 5358175 -15788533 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 1 625 543 135 0 0 chr2R 5359769 5359865 -15786843 + (CAG)n Simple_repeat Simple_repeat 3 98 0 1 625 222 37 0 0 chr2R 5359988 5360015 -15786693 + (CAG)n Simple_repeat Simple_repeat 2 28 0 1 625 305 100 0 20 chr2R 5360243 5360294 -15786414 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 625 218 262 36 0 chr2R 5365561 5365645 -15781063 + (TA)n Simple_repeat Simple_repeat 2 88 0 1 625 3991 2 0 0 chr2R 5367636 5368064 -15778644 - ROO_LTR LTR Pao 0 428 1 1 625 10528 9 1 5 chr2R 5368064 5369261 -15777447 - ROO_I LTR Pao 0 8256 7065 1 625 8493 1 0 0 chr2R 5369261 5370165 -15776543 + HOBO DNA hAT 1 904 -2112 1 625 4650 2 2 10 chr2R 5370157 5370667 -15776041 + HOBO DNA hAT 2511 3016 0 1 78 63415 0 8 0 chr2R 5370667 5377681 -15769027 - ROO_I LTR Pao -1184 7072 1 1 626 3965 5 0 0 chr2R 5377681 5378109 -15768599 - ROO_LTR LTR Pao 0 428 1 1 626 222 37 0 0 chr2R 5378229 5378256 -15768452 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 626 41 36 0 0 chr2R 5379553 5379608 -15767100 + AT_rich Low_complexity Low_complexity 1 55 0 1 626 288 120 0 0 chr2R 5384312 5384362 -15762346 + (GGATG)n Simple_repeat Simple_repeat 5 54 0 1 626 186 103 0 0 chr2R 5385663 5385692 -15761016 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 626 321 159 0 0 chr2R 5386804 5386867 -15759841 + (ACTG)n Simple_repeat Simple_repeat 4 66 0 1 626 25 0 0 0 chr2R 5388226 5388251 -15758457 + AT_rich Low_complexity Low_complexity 1 25 0 1 626 189 0 0 0 chr2R 5388762 5388783 -15757925 + (ATCG)n Simple_repeat Simple_repeat 1 21 0 1 626 180 0 0 0 chr2R 5388796 5388816 -15757892 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1 626 21 0 0 0 chr2R 5389771 5389792 -15756916 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 249 262 0 0 chr2R 5391357 5391418 -15755290 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 626 212 162 0 0 chr2R 5391563 5391600 -15755108 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 626 21 0 0 0 chr2R 5391898 5391919 -15754789 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 234 206 0 0 chr2R 5391951 5392019 -15754689 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 626 225 0 0 0 chr2R 5392313 5392338 -15754370 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 626 233 284 0 0 chr2R 5392809 5392897 -15753811 + GA-rich Low_complexity Low_complexity 1 88 0 1 626 261 83 0 0 chr2R 5395377 5395413 -15751295 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 626 180 150 16 48 chr2R 5396226 5396289 -15750419 + (CATTT)n Simple_repeat Simple_repeat 2 62 0 1 626 186 150 0 0 chr2R 5397129 5397169 -15749539 + (CCTAA)n Simple_repeat Simple_repeat 2 41 0 1 626 228 35 0 0 chr2R 5401578 5401607 -15745101 + (CAA)n Simple_repeat Simple_repeat 3 31 0 1 626 205 118 39 0 chr2R 5404446 5404497 -15742211 + (CAG)n Simple_repeat Simple_repeat 1 53 0 1 626 291 175 0 0 chr2R 5406680 5406737 -15739971 + CT-rich Low_complexity Low_complexity 2 58 0 1 626 255 271 0 0 chr2R 5407006 5407076 -15739632 + CT-rich Low_complexity Low_complexity 1 70 0 1 626 210 128 0 0 chr2R 5407247 5407286 -15739422 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 626 198 118 0 0 chr2R 5407448 5407482 -15739226 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 626 294 171 0 0 chr2R 5408338 5408408 -15738300 + CT-rich Low_complexity Low_complexity 2 71 0 1 626 283 287 0 0 chr2R 5408986 5409101 -15737607 + CT-rich Low_complexity Low_complexity 2 116 0 1 626 212 349 0 0 chr2R 5409417 5409526 -15737182 + (CA)n Simple_repeat Simple_repeat 2 110 0 1 626 209 217 17 0 chr2R 5409624 5409684 -15737024 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 626 243 286 11 11 chr2R 5416267 5416359 -15730349 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 626 234 216 0 19 chr2R 5417891 5417943 -15728765 + (TATATG)n Simple_repeat Simple_repeat 6 56 0 1 626 261 232 0 28 chr2R 5418644 5418715 -15727993 + (CATATA)n Simple_repeat Simple_repeat 1 69 0 1 626 224 77 0 25 chr2R 5419662 5419702 -15727006 + (CAGT)n Simple_repeat Simple_repeat 4 42 0 1 626 207 0 0 0 chr2R 5420106 5420129 -15726579 + (CCAA)n Simple_repeat Simple_repeat 4 26 0 1 626 261 186 22 34 chr2R 5423383 5423472 -15723236 + (CAG)n Simple_repeat Simple_repeat 3 90 0 1 626 233 182 0 120 chr2R 5423663 5423763 -15722945 + ROO_I LTR Pao 639 726 -7530 1 626 22 35 0 0 chr2R 5425632 5425661 -15721047 + AT_rich Low_complexity Low_complexity 1 29 0 1 626 23 0 0 0 chr2R 5426120 5426143 -15720565 + AT_rich Low_complexity Low_complexity 1 23 0 1 626 435 19 0 0 chr2R 5427842 5427894 -15718814 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 626 25 31 0 0 chr2R 5428257 5428289 -15718419 + AT_rich Low_complexity Low_complexity 1 32 0 1 626 266 106 21 0 chr2R 5428291 5428338 -15718370 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 626 21 36 0 0 chr2R 5428623 5428651 -15718057 + AT_rich Low_complexity Low_complexity 1 28 0 1 626 239 114 23 0 chr2R 5428670 5428714 -15717994 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 626 214 112 48 48 chr2R 5428744 5428828 -15717880 + A-rich Low_complexity Low_complexity 2 85 0 1 626 32 26 0 0 chr2R 5428874 5428913 -15717795 + AT_rich Low_complexity Low_complexity 1 39 0 1 626 39 22 0 0 chr2R 5429464 5429510 -15717198 + AT_rich Low_complexity Low_complexity 1 46 0 1 626 180 77 0 0 chr2R 5430139 5430165 -15716543 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 626 182 118 29 0 chr2R 5430241 5430275 -15716433 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 626 185 224 0 17 chr2R 5434166 5434225 -15712483 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1 626 30 27 0 0 chr2R 5435005 5435042 -15711666 + AT_rich Low_complexity Low_complexity 1 37 0 1 626 231 245 0 0 chr2R 5435269 5435318 -15711390 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 626 285 151 0 0 chr2R 5435756 5435809 -15710899 + CT-rich Low_complexity Low_complexity 2 54 0 1 626 189 175 0 0 chr2R 5439829 5439869 -15706839 + (CATA)n Simple_repeat Simple_repeat 2 41 0 1 626 22 0 0 0 chr2R 5446616 5446638 -15700070 + AT_rich Low_complexity Low_complexity 1 22 0 1 626 206 118 0 0 chr2R 5453544 5453578 -15693130 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 626 27 73 0 0 chr2R 5453652 5453707 -15693001 + AT_rich Low_complexity Low_complexity 1 55 0 1 626 27 49 0 0 chr2R 5454275 5454316 -15692392 + AT_rich Low_complexity Low_complexity 1 41 0 1 626 288 0 0 0 chr2R 5454357 5454389 -15692319 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 626 244 288 0 0 chr2R 5454980 5455060 -15691648 + T-rich Low_complexity Low_complexity 1 80 0 1 626 22 35 0 0 chr2R 5464688 5464717 -15681991 + AT_rich Low_complexity Low_complexity 1 29 0 1 626 21 36 0 0 chr2R 5466744 5466772 -15679936 + AT_rich Low_complexity Low_complexity 1 28 0 1 626 24 67 0 0 chr2R 5466857 5466902 -15679806 + AT_rich Low_complexity Low_complexity 1 45 0 1 626 180 0 0 0 chr2R 5474296 5474316 -15672392 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 626 22 35 0 0 chr2R 5474427 5474456 -15672252 + AT_rich Low_complexity Low_complexity 1 29 0 1 626 21 0 0 0 chr2R 5474521 5474542 -15672166 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 32 43 0 0 chr2R 5478196 5478242 -15668466 + AT_rich Low_complexity Low_complexity 1 46 0 1 626 22 0 0 0 chr2R 5490959 5490981 -15655727 + AT_rich Low_complexity Low_complexity 1 22 0 1 626 31 44 0 0 chr2R 5498804 5498849 -15647859 + AT_rich Low_complexity Low_complexity 1 45 0 1 626 25 31 0 0 chr2R 5503131 5503163 -15643545 + AT_rich Low_complexity Low_complexity 1 32 0 1 78 204 40 0 0 chr2R 5505019 5505044 -15641664 + (TGGG)n Simple_repeat Simple_repeat 2 26 0 1 627 27 29 0 0 chr2R 5505628 5505662 -15641046 + AT_rich Low_complexity Low_complexity 1 34 0 1 627 33 25 0 0 chr2R 5506347 5506387 -15640321 + AT_rich Low_complexity Low_complexity 1 40 0 1 627 213 39 0 0 chr2R 5507635 5507661 -15639047 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 627 24 32 0 0 chr2R 5508534 5508565 -15638143 + AT_rich Low_complexity Low_complexity 1 31 0 1 627 213 39 0 0 chr2R 5512584 5512610 -15634098 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 1 627 216 0 0 0 chr2R 5513333 5513357 -15633351 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 627 180 179 0 0 chr2R 5514079 5514118 -15632590 + (TTG)n Simple_repeat Simple_repeat 2 40 0 1 627 192 143 0 0 chr2R 5514335 5514377 -15632331 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 627 211 195 0 0 chr2R 5520010 5520051 -15626657 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 627 25 31 0 0 chr2R 5522211 5522243 -15624465 + AT_rich Low_complexity Low_complexity 1 32 0 1 627 201 240 0 0 chr2R 5524923 5524973 -15621735 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 627 21 0 0 0 chr2R 5528271 5528292 -15618416 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 21 57 0 0 chr2R 5528463 5528498 -15618210 + AT_rich Low_complexity Low_complexity 1 35 0 1 627 260 236 0 27 chr2R 5532421 5532495 -15614213 + (CAGAGA)n Simple_repeat Simple_repeat 1 72 0 1 627 21 36 0 0 chr2R 5532715 5532743 -15613965 + AT_rich Low_complexity Low_complexity 1 28 0 1 627 344 135 0 13 chr2R 5535532 5535607 -15611101 + (CAACC)n Simple_repeat Simple_repeat 2 75 0 1 627 203 158 0 0 chr2R 5536918 5536956 -15609752 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1 627 240 86 0 0 chr2R 5542828 5542863 -15603845 + (CAGGA)n Simple_repeat Simple_repeat 3 37 0 1 627 213 39 0 0 chr2R 5542958 5542984 -15603724 + (A)n Simple_repeat Simple_repeat 1 26 0 1 627 195 42 0 0 chr2R 5543234 5543258 -15603450 + (A)n Simple_repeat Simple_repeat 1 24 0 1 627 216 111 0 0 chr2R 5545030 5545066 -15601642 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 1 627 204 278 27 14 chr2R 5545882 5545955 -15600753 + (CTCGG)n Simple_repeat Simple_repeat 3 76 0 1 627 21 0 0 0 chr2R 5549443 5549464 -15597244 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 260 82 66 0 chr2R 5550116 5550177 -15596531 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 627 249 108 0 0 chr2R 5553727 5553764 -15592944 + (CCGAA)n Simple_repeat Simple_repeat 5 41 0 1 627 21 0 0 0 chr2R 5556970 5556991 -15589717 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 28 48 0 0 chr2R 5567804 5567846 -15578862 + AT_rich Low_complexity Low_complexity 1 42 0 1 627 201 175 0 24 chr2R 5568251 5568292 -15578416 + (CAACT)n Simple_repeat Simple_repeat 2 41 0 1 627 36 0 0 0 chr2R 5568544 5568580 -15578128 + AT_rich Low_complexity Low_complexity 1 36 0 1 627 302 128 0 0 chr2R 5570233 5570280 -15576428 - FB4_DM DNA Tc1 0 4089 4043 1 627 24 0 0 0 chr2R 5571566 5571590 -15575118 + AT_rich Low_complexity Low_complexity 1 24 0 1 627 203 0 37 0 chr2R 5571817 5571844 -15574864 + (TTTAA)n Simple_repeat Simple_repeat 1 28 0 1 627 23 78 0 0 chr2R 5571925 5571976 -15574732 + AT_rich Low_complexity Low_complexity 1 51 0 1 627 228 35 0 0 chr2R 5574555 5574584 -15572124 + (A)n Simple_repeat Simple_repeat 1 29 0 1 627 261 258 0 15 chr2R 5580013 5580080 -15566628 + (TTG)n Simple_repeat Simple_repeat 2 67 0 1 627 28 48 0 0 chr2R 5581642 5581684 -15565024 + AT_rich Low_complexity Low_complexity 1 42 0 1 627 21 0 0 0 chr2R 5582984 5583005 -15563703 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 192 40 0 0 chr2R 5583963 5583988 -15562720 + (TAG)n Simple_repeat Simple_repeat 2 26 0 1 627 48 0 0 0 chr2R 5590837 5590885 -15555823 + AT_rich Low_complexity Low_complexity 1 48 0 1 627 204 204 0 0 chr2R 5591081 5591125 -15555583 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 627 953 162 69 73 chr2R 5593383 5593616 -15553092 + DNAREP1_DM LINE Penelope 363 594 0 1 627 21 0 0 0 chr2R 5597962 5597983 -15548725 + GC_rich Low_complexity Low_complexity 1 21 0 1 627 189 0 0 0 chr2R 5598903 5598924 -15547784 + (CATA)n Simple_repeat Simple_repeat 3 23 0 1 627 303 71 0 0 chr2R 5599414 5599456 -15547252 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1 627 26 30 0 0 chr2R 5603769 5603802 -15542906 + AT_rich Low_complexity Low_complexity 1 33 0 1 627 246 95 0 0 chr2R 5604907 5604949 -15541759 + (CAG)n Simple_repeat Simple_repeat 1 42 0 1 627 30 27 0 0 chr2R 5608292 5608329 -15538379 + AT_rich Low_complexity Low_complexity 1 37 0 1 627 4548 10 0 0 chr2R 5614175 5614682 -15532026 + DM176_LTR LTR Gypsy 1 507 0 1 627 57018 2 0 8 chr2R 5614682 5621157 -15525551 + DM176_I LTR Gypsy 1 6420 0 1 627 4548 10 0 0 chr2R 5621157 5621664 -15525044 + DM176_LTR LTR Gypsy 1 507 0 1 627 234 0 0 0 chr2R 5623669 5623695 -15523013 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 627 209 240 13 13 chr2R 5625922 5625998 -15520710 + (TTTA)n Simple_repeat Simple_repeat 3 78 0 1 627 198 71 0 0 chr2R 5626517 5626545 -15520163 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 627 194 180 16 0 chr2R 5627635 5627696 -15519012 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 627 213 135 27 0 chr2R 5628153 5628190 -15518518 + (TATAG)n Simple_repeat Simple_repeat 2 39 0 1 627 276 234 0 0 chr2R 5629318 5629395 -15517313 + (CCTG)n Simple_repeat Simple_repeat 3 79 0 1 627 26 30 0 0 chr2R 5636036 5636069 -15510639 + AT_rich Low_complexity Low_complexity 1 33 0 1 628 23 54 0 0 chr2R 5639621 5639658 -15507050 + AT_rich Low_complexity Low_complexity 1 37 0 1 628 180 135 0 0 chr2R 5641022 5641059 -15505649 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 628 204 111 0 0 chr2R 5642918 5642954 -15503754 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 628 21 0 0 0 chr2R 5646076 5646097 -15500611 + AT_rich Low_complexity Low_complexity 1 21 0 1 628 30 0 0 0 chr2R 5647014 5647044 -15499664 + AT_rich Low_complexity Low_complexity 1 30 0 1 628 21 36 0 0 chr2R 5648589 5648617 -15498091 + AT_rich Low_complexity Low_complexity 1 28 0 1 628 25 75 0 0 chr2R 5649902 5649955 -15496753 + AT_rich Low_complexity Low_complexity 1 53 0 1 628 231 36 0 0 chr2R 5655763 5655791 -15490917 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 628 256 283 43 11 chr2R 5656327 5656420 -15490288 + DNAREP1_DM LINE Penelope 369 464 -130 1 628 28 0 0 0 chr2R 5657003 5657031 -15489677 + AT_rich Low_complexity Low_complexity 1 28 0 1 628 24 0 0 0 chr2R 5657853 5657877 -15488831 + AT_rich Low_complexity Low_complexity 1 24 0 1 628 189 0 0 0 chr2R 5658734 5658755 -15487953 + (ATG)n Simple_repeat Simple_repeat 3 23 0 1 628 232 228 0 89 chr2R 5659703 5659804 -15486904 - ROO_I LTR Pao -7514 742 651 1 628 219 36 0 0 chr2R 5659861 5659889 -15486819 + (CTG)n Simple_repeat Simple_repeat 1 28 0 1 628 267 238 0 16 chr2R 5661267 5661331 -15485377 + (CTGGGG)n Simple_repeat Simple_repeat 5 67 0 1 628 216 200 20 0 chr2R 5667473 5667523 -15479185 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 1 628 275 221 0 23 chr2R 5667553 5667641 -15479067 - ROO_I LTR Pao -7518 738 653 1 628 21 0 0 0 chr2R 5668084 5668105 -15478603 + AT_rich Low_complexity Low_complexity 1 21 0 1 628 26 0 0 0 chr2R 5669548 5669574 -15477134 + AT_rich Low_complexity Low_complexity 1 26 0 1 628 30 0 0 0 chr2R 5670301 5670331 -15476377 + AT_rich Low_complexity Low_complexity 1 30 0 1 628 25 0 0 0 chr2R 5671693 5671718 -15474990 + AT_rich Low_complexity Low_complexity 1 25 0 1 628 21 0 0 0 chr2R 5674625 5674646 -15472062 + AT_rich Low_complexity Low_complexity 1 21 0 1 628 268 263 0 89 chr2R 5679965 5680082 -15466626 - DNAREP1_DM LINE Penelope -104 490 407 1 628 226 214 0 0 chr2R 5682734 5682776 -15463932 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 1 628 26 0 0 0 chr2R 5687862 5687888 -15458820 + AT_rich Low_complexity Low_complexity 1 26 0 1 628 198 71 0 0 chr2R 5698811 5698839 -15447869 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 628 196 164 15 15 chr2R 5701680 5701748 -15444960 + T-rich Low_complexity Low_complexity 6 73 0 1 628 30 27 0 0 chr2R 5706152 5706189 -15440519 + AT_rich Low_complexity Low_complexity 1 37 0 1 628 200 225 0 0 chr2R 5706938 5706978 -15439730 + (CAT)n Simple_repeat Simple_repeat 2 41 0 1 628 260 243 14 14 chr2R 5707211 5707282 -15439426 + (CATATA)n Simple_repeat Simple_repeat 6 76 0 1 628 24 0 0 0 chr2R 5707879 5707903 -15438805 + AT_rich Low_complexity Low_complexity 1 24 0 1 628 182 176 0 19 chr2R 5714948 5715000 -15431708 + (CACTC)n Simple_repeat Simple_repeat 5 55 0 1 628 29 0 0 0 chr2R 5715609 5715638 -15431070 + AT_rich Low_complexity Low_complexity 1 29 0 1 628 201 129 0 0 chr2R 5716641 5716672 -15430036 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 628 24 0 0 0 chr2R 5721831 5721855 -15424853 + AT_rich Low_complexity Low_complexity 1 24 0 1 628 218 204 0 20 chr2R 5722702 5722752 -15423956 + (CCGAA)n Simple_repeat Simple_repeat 1 49 0 1 628 285 96 0 0 chr2R 5723950 5724002 -15422706 - ROO_I LTR Pao -7562 694 643 1 628 195 152 0 0 chr2R 5724035 5724081 -15422627 + (TATCG)n Simple_repeat Simple_repeat 1 46 0 1 628 629 84 147 0 chr2R 5730722 5730817 -15415891 + DNAREP1_DM LINE Penelope 466 574 -20 1 628 290 169 108 0 chr2R 5730856 5730921 -15415787 + PROTOP DNA P 70 141 -4339 1 628 21 0 0 0 chr2R 5746767 5746788 -15399920 + AT_rich Low_complexity Low_complexity 1 21 0 1 628 279 175 0 0 chr2R 5747618 5747675 -15399033 + (GTATG)n Simple_repeat Simple_repeat 5 61 0 1 628 186 118 0 0 chr2R 5748114 5748148 -15398560 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 1 628 30 0 0 0 chr2R 5748570 5748600 -15398108 + AT_rich Low_complexity Low_complexity 1 30 0 1 628 210 71 0 0 chr2R 5749443 5749471 -15397237 + (GGAGA)n Simple_repeat Simple_repeat 2 29 0 1 628 38 75 0 0 chr2R 5750843 5750923 -15395785 + AT_rich Low_complexity Low_complexity 1 80 0 1 628 180 111 0 0 chr2R 5755105 5755132 -15391576 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 628 3099 38 24 3 chr2R 5755404 5755777 -15390931 + ROO_LTR LTR Pao 48 428 0 1 628 571 250 148 42 chr2R 5755777 5756039 -15390669 - DNAREP1_DM LINE Penelope -49 545 256 1 628 23 0 0 0 chr2R 5756326 5756349 -15390359 + AT_rich Low_complexity Low_complexity 1 23 0 1 628 30 27 0 0 chr2R 5756621 5756658 -15390050 + AT_rich Low_complexity Low_complexity 1 37 0 1 628 1147 37 0 0 chr2R 5756667 5756803 -15389905 + ROO_LTR LTR Pao 293 428 0 1 628 1362 72 0 5 chr2R 5757606 5757812 -15388896 - S_DM DNA Tc1 -10 1726 1522 1 628 1775 40 91 0 chr2R 5757812 5758163 -15388545 - ROOA_LTR LTR Pao -3 383 1 1 628 4017 0 0 0 chr2R 5758600 5759028 -15387680 + ROO_LTR LTR Pao 1 428 0 1 628 45 55 0 0 chr2R 5761590 5761663 -15385045 + AT_rich Low_complexity Low_complexity 1 73 0 1 628 507 66 0 0 chr2R 5761931 5761992 -15384716 + DNAREP1_DM LINE Penelope 1 61 -533 1 628 625 164 392 6 chr2R 5761999 5762170 -15384538 + DNAREP1_DM LINE Penelope 246 482 -112 1 628 293 250 12 0 chr2R 5762316 5762396 -15384312 + (TA)n Simple_repeat Simple_repeat 2 82 0 1 628 21 0 0 0 chr2R 5764365 5764386 -15382322 + AT_rich Low_complexity Low_complexity 1 21 0 1 629 26 82 0 0 chr2R 5781390 5781451 -15365257 + AT_rich Low_complexity Low_complexity 1 61 0 1 629 24 67 0 0 chr2R 5785796 5785841 -15360867 + AT_rich Low_complexity Low_complexity 1 45 0 1 629 273 200 95 48 chr2R 5786147 5786231 -15360477 - DNAREP1_DM LINE Penelope -19 575 488 1 629 341 184 79 0 chr2R 5786326 5786402 -15360306 - DNAREP1_DM LINE Penelope -481 113 32 1 629 212 204 0 39 chr2R 5796337 5796388 -15350320 + (TGGG)n Simple_repeat Simple_repeat 1 49 0 1 629 201 170 37 19 chr2R 5802246 5802300 -15344408 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 629 23 0 0 0 chr2R 5803012 5803035 -15343673 + AT_rich Low_complexity Low_complexity 1 23 0 1 629 202 135 27 0 chr2R 5803035 5803072 -15343636 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 629 229 221 70 47 chr2R 5804104 5804232 -15342476 - ROO_I LTR Pao -7497 759 629 1 629 195 139 0 0 chr2R 5804314 5804350 -15342358 + (CTG)n Simple_repeat Simple_repeat 3 38 0 1 629 237 65 0 0 chr2R 5804891 5804922 -15341786 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 629 213 159 0 22 chr2R 5808448 5808493 -15338215 + T-rich Low_complexity Low_complexity 2 45 0 1 629 278 98 0 19 chr2R 5810626 5810678 -15336030 + (TTTCC)n Simple_repeat Simple_repeat 1 51 0 1 629 231 103 0 0 chr2R 5812697 5812736 -15333972 + (GGAA)n Simple_repeat Simple_repeat 1 39 0 1 629 31 26 0 0 chr2R 5813942 5813980 -15332728 + AT_rich Low_complexity Low_complexity 1 38 0 1 629 41 21 0 0 chr2R 5814410 5814458 -15332250 + AT_rich Low_complexity Low_complexity 1 48 0 1 629 202 231 15 0 chr2R 5814972 5815037 -15331671 + (TAAA)n Simple_repeat Simple_repeat 2 67 0 1 629 28 48 0 0 chr2R 5815065 5815107 -15331601 + AT_rich Low_complexity Low_complexity 1 42 0 1 629 279 227 0 0 chr2R 5815546 5815612 -15331096 + (CAGT)n Simple_repeat Simple_repeat 1 66 0 1 629 24 32 0 0 chr2R 5816147 5816178 -15330530 + AT_rich Low_complexity Low_complexity 1 31 0 1 629 183 100 0 0 chr2R 5817574 5817604 -15329104 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 629 210 182 0 22 chr2R 5819402 5819447 -15327261 + (CAG)n Simple_repeat Simple_repeat 3 46 0 1 629 216 67 0 0 chr2R 5821495 5821525 -15325183 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 629 225 247 0 27 chr2R 5825869 5825944 -15320764 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 1 629 226 268 82 35 chr2R 5827272 5827357 -15319351 - OSVALDO_LTR LTR Gypsy -1090 106 18 1 629 27 81 0 0 chr2R 5829797 5829859 -15316849 + AT_rich Low_complexity Low_complexity 1 62 0 1 629 287 221 13 13 chr2R 5830976 5831054 -15315654 + (TTCTG)n Simple_repeat Simple_repeat 3 80 0 1 629 300 216 0 54 chr2R 5831565 5831658 -15315050 - DNAREP1_DM LINE Penelope -11 583 496 1 629 207 0 0 0 chr2R 5832196 5832219 -15314489 + (TTCTG)n Simple_repeat Simple_repeat 3 25 0 1 629 249 83 0 0 chr2R 5832420 5832456 -15314252 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 629 1087 8 0 0 chr2R 5833000 5833129 -15313579 + BS LINE Jockey 4998 5126 0 1 629 213 196 0 0 chr2R 5837658 5837704 -15309004 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 629 23 0 0 0 chr2R 5839193 5839216 -15307492 + AT_rich Low_complexity Low_complexity 1 23 0 1 629 249 83 0 0 chr2R 5841134 5841170 -15305538 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 1 629 198 0 0 0 chr2R 5843183 5843205 -15303503 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 629 26 30 0 0 chr2R 5846464 5846497 -15300211 + AT_rich Low_complexity Low_complexity 1 33 0 1 629 267 214 0 0 chr2R 5852718 5852774 -15293934 - DNAREP1_DM LINE Penelope 0 594 539 1 629 346 233 90 39 chr2R 5852854 5853010 -15293698 - DNAREP1_DM LINE Penelope -301 293 130 1 629 465 209 71 60 chr2R 5853048 5853216 -15293492 - DNAREP1_DM LINE Penelope -419 175 6 1 629 261 237 17 0 chr2R 5854162 5854221 -15292487 + DNAREP1_DM LINE Penelope 392 451 -143 1 629 261 139 0 0 chr2R 5856813 5856856 -15289852 + (TTG)n Simple_repeat Simple_repeat 1 43 0 1 629 24 32 0 0 chr2R 5858169 5858200 -15288508 + AT_rich Low_complexity Low_complexity 1 31 0 1 629 22 0 0 0 chr2R 5858553 5858575 -15288133 + AT_rich Low_complexity Low_complexity 1 22 0 1 629 213 132 0 0 chr2R 5864848 5864886 -15281822 + (CAATC)n Simple_repeat Simple_repeat 5 42 0 1 629 231 146 0 0 chr2R 5867481 5867522 -15279186 + (CCG)n Simple_repeat Simple_repeat 1 41 0 1 629 21 0 0 0 chr2R 5867661 5867682 -15279026 + GC_rich Low_complexity Low_complexity 1 21 0 1 629 207 69 0 0 chr2R 5868933 5868962 -15277746 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 629 183 186 0 0 chr2R 5877078 5877121 -15269587 + (TTG)n Simple_repeat Simple_repeat 1 43 0 1 629 186 71 0 0 chr2R 5877748 5877776 -15268932 + (A)n Simple_repeat Simple_repeat 1 28 0 1 629 207 137 58 19 chr2R 5881817 5881869 -15264839 + T-rich Low_complexity Low_complexity 5 58 0 1 629 207 149 75 0 chr2R 5882081 5882148 -15264560 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 629 189 0 0 0 chr2R 5882490 5882511 -15264197 + (TTTAA)n Simple_repeat Simple_repeat 5 25 0 1 629 204 97 0 0 chr2R 5883286 5883317 -15263391 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 629 214 191 21 0 chr2R 5883652 5883699 -15263009 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1 629 279 104 0 0 chr2R 5883937 5883985 -15262723 + (TTGG)n Simple_repeat Simple_repeat 1 48 0 1 629 34 24 0 0 chr2R 5884742 5884783 -15261925 + AT_rich Low_complexity Low_complexity 1 41 0 1 629 24 32 0 0 chr2R 5885591 5885622 -15261086 + AT_rich Low_complexity Low_complexity 1 31 0 1 629 270 81 0 0 chr2R 5889830 5889867 -15256841 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 1 629 330 45 0 0 chr2R 5890163 5890207 -15256501 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 629 252 0 0 0 chr2R 5890988 5891016 -15255692 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 629 9875 14 0 0 chr2R 5893410 5894515 -15252193 + PROTOP_A DNA P 1 1105 0 1 629 23 0 0 0 chr2R 5896026 5896049 -15250659 + AT_rich Low_complexity Low_complexity 1 23 0 1 629 231 204 0 0 chr2R 5896789 5896833 -15249875 + (CAT)n Simple_repeat Simple_repeat 1 44 0 1 630 210 182 0 22 chr2R 5899200 5899245 -15247463 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1 630 268 239 125 27 chr2R 5899686 5899798 -15246910 + DNAREP1_DM LINE Penelope 4 126 -468 1 630 21 0 0 0 chr2R 5901706 5901727 -15244981 + AT_rich Low_complexity Low_complexity 1 21 0 1 630 224 30 30 0 chr2R 5904119 5904152 -15242556 + (CAATT)n Simple_repeat Simple_repeat 2 35 0 1 630 197 221 15 0 chr2R 5904550 5904618 -15242090 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 630 23 54 0 0 chr2R 5905399 5905436 -15241272 + AT_rich Low_complexity Low_complexity 1 37 0 1 630 21 57 0 0 chr2R 5907031 5907066 -15239642 + AT_rich Low_complexity Low_complexity 1 35 0 1 630 691 123 208 0 chr2R 5910082 5910212 -15236496 + FB4_DM DNA Tc1 1 157 -3932 1 630 452 138 81 57 chr2R 5910220 5910343 -15236365 - FB4_DM DNA Tc1 -3418 671 546 1 630 888 132 98 106 chr2R 5910249 5910494 -15236214 + FB4_DM DNA Tc1 3847 4089 0 1 630 264 30 0 0 chr2R 5911493 5911526 -15235182 + (GAATG)n Simple_repeat Simple_repeat 4 36 0 1 630 25 0 0 0 chr2R 5913244 5913269 -15233439 + GC_rich Low_complexity Low_complexity 1 25 0 1 630 21 36 0 0 chr2R 5913714 5913742 -15232966 + AT_rich Low_complexity Low_complexity 1 28 0 1 630 28 29 0 0 chr2R 5913844 5913879 -15232829 + AT_rich Low_complexity Low_complexity 1 35 0 1 630 21 0 0 0 chr2R 5925314 5925335 -15221373 + AT_rich Low_complexity Low_complexity 1 21 0 1 630 21 57 0 0 chr2R 5927429 5927464 -15219244 + AT_rich Low_complexity Low_complexity 1 35 0 1 630 575 176 0 17 chr2R 5929112 5929291 -15217417 + (TTG)n Simple_repeat Simple_repeat 3 178 0 1 630 372 207 0 0 chr2R 5929474 5929585 -15217123 + (TTG)n Simple_repeat Simple_repeat 3 113 0 1 630 428 220 0 17 chr2R 5929816 5929996 -15216712 + (TTG)n Simple_repeat Simple_repeat 3 179 0 1 630 208 217 0 0 chr2R 5929996 5930042 -15216666 + (TCG)n Simple_repeat Simple_repeat 2 47 0 1 630 584 191 0 18 chr2R 5930323 5930661 -15216047 + (TTG)n Simple_repeat Simple_repeat 1 331 0 1 630 34 0 0 0 chr2R 5932679 5932713 -15213995 + AT_rich Low_complexity Low_complexity 1 34 0 1 630 201 226 0 0 chr2R 5933504 5933557 -15213151 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 630 21 0 0 0 chr2R 5933895 5933916 -15212792 + AT_rich Low_complexity Low_complexity 1 21 0 1 630 61 15 0 0 chr2R 5935342 5935410 -15211298 + AT_rich Low_complexity Low_complexity 1 68 0 1 630 35 78 0 0 chr2R 5936318 5936395 -15210313 + AT_rich Low_complexity Low_complexity 1 77 0 1 630 24 0 0 0 chr2R 5936419 5936443 -15210265 + AT_rich Low_complexity Low_complexity 1 24 0 1 630 26 0 0 0 chr2R 5936770 5936796 -15209912 + AT_rich Low_complexity Low_complexity 1 26 0 1 630 28 61 0 0 chr2R 5936857 5936906 -15209802 + AT_rich Low_complexity Low_complexity 1 49 0 1 630 26 30 0 0 chr2R 5940566 5940599 -15206109 + AT_rich Low_complexity Low_complexity 1 33 0 1 630 183 235 0 0 chr2R 5945392 5945443 -15201265 + CT-rich Low_complexity Low_complexity 2 52 0 1 630 21 36 0 0 chr2R 5946295 5946323 -15200385 + AT_rich Low_complexity Low_complexity 1 28 0 1 630 214 246 0 47 chr2R 5946502 5946566 -15200142 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1 630 21 57 0 0 chr2R 5949568 5949603 -15197105 + AT_rich Low_complexity Low_complexity 1 35 0 1 630 23 0 0 0 chr2R 5961059 5961082 -15185626 + AT_rich Low_complexity Low_complexity 1 23 0 1 630 195 162 0 0 chr2R 5964439 5964476 -15182232 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 1 630 22 0 0 0 chr2R 5965606 5965628 -15181080 + AT_rich Low_complexity Low_complexity 1 22 0 1 630 210 176 0 0 chr2R 5966423 5966474 -15180234 + (CAT)n Simple_repeat Simple_repeat 2 52 0 1 630 24 53 0 0 chr2R 5974718 5974756 -15171952 + AT_rich Low_complexity Low_complexity 1 38 0 1 630 21 0 0 0 chr2R 5974809 5974830 -15171878 + AT_rich Low_complexity Low_complexity 1 21 0 1 630 23 33 0 0 chr2R 5975388 5975418 -15171290 + AT_rich Low_complexity Low_complexity 1 30 0 1 630 21 36 0 0 chr2R 5976338 5976366 -15170342 + AT_rich Low_complexity Low_complexity 1 28 0 1 630 221 276 0 0 chr2R 5977564 5977640 -15169068 + (CA)n Simple_repeat Simple_repeat 2 77 0 1 630 28 29 0 0 chr2R 5978744 5978779 -15167929 + AT_rich Low_complexity Low_complexity 1 35 0 1 630 21 36 0 0 chr2R 5979597 5979625 -15167083 + AT_rich Low_complexity Low_complexity 1 28 0 1 630 195 42 0 0 chr2R 5983825 5983849 -15162859 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 630 210 219 0 0 chr2R 5986099 5986140 -15160568 + (TCG)n Simple_repeat Simple_repeat 2 42 0 1 630 204 97 0 0 chr2R 5988857 5988888 -15157820 + (GAAAA)n Simple_repeat Simple_repeat 3 33 0 1 630 217 213 0 0 chr2R 5989288 5989335 -15157373 + (CCA)n Simple_repeat Simple_repeat 2 48 0 1 630 222 37 0 0 chr2R 5992723 5992750 -15153958 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 630 221 247 13 25 chr2R 5995850 5995929 -15150779 + A-rich Low_complexity Low_complexity 5 82 0 1 630 245 180 0 0 chr2R 5996045 5996095 -15150613 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 630 24 0 0 0 chr2R 5996911 5996935 -15149773 + AT_rich Low_complexity Low_complexity 1 24 0 1 630 24 32 0 0 chr2R 5997153 5997184 -15149524 + AT_rich Low_complexity Low_complexity 1 31 0 1 630 189 0 0 0 chr2R 6005937 6005958 -15140750 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1 630 203 0 0 36 chr2R 6008726 6008754 -15137954 + (TTA)n Simple_repeat Simple_repeat 3 29 0 1 630 283 186 43 0 chr2R 6012326 6012396 -15134312 + ROO_I LTR Pao 666 738 -7518 1 630 313 274 0 0 chr2R 6014782 6014906 -15131802 + (CAA)n Simple_repeat Simple_repeat 1 124 0 1 630 236 288 0 0 chr2R 6014992 6015058 -15131650 + (CAA)n Simple_repeat Simple_repeat 2 67 0 1 631 25 0 0 0 chr2R 6032595 6032620 -15114088 + AT_rich Low_complexity Low_complexity 1 25 0 1 631 223 71 48 0 chr2R 6037043 6037085 -15109623 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 631 23 0 0 0 chr2R 6038068 6038091 -15108617 + AT_rich Low_complexity Low_complexity 1 23 0 1 631 41 58 0 0 chr2R 6043370 6043439 -15103269 + AT_rich Low_complexity Low_complexity 1 69 0 1 631 206 32 0 31 chr2R 6043864 6043896 -15102812 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 1 631 22 0 0 0 chr2R 6046920 6046942 -15099766 + AT_rich Low_complexity Low_complexity 1 22 0 1 631 39 22 0 0 chr2R 6048833 6048879 -15097829 + AT_rich Low_complexity Low_complexity 1 46 0 1 631 213 39 0 0 chr2R 6053178 6053204 -15093504 + (ATG)n Simple_repeat Simple_repeat 1 26 0 1 631 237 65 0 0 chr2R 6055353 6055384 -15091324 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 631 246 95 0 0 chr2R 6055891 6055933 -15090775 + (A)n Simple_repeat Simple_repeat 1 42 0 1 631 217 163 23 0 chr2R 6056104 6056147 -15090561 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 631 300 102 0 0 chr2R 6056158 6056207 -15090501 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 631 21 0 0 0 chr2R 6058642 6058663 -15088045 + AT_rich Low_complexity Low_complexity 1 21 0 1 631 207 0 0 0 chr2R 6059764 6059787 -15086921 + (CAG)n Simple_repeat Simple_repeat 3 25 0 1 631 3766 0 0 0 chr2R 6064439 6064867 -15081841 - ROO_LTR LTR Pao 0 428 1 1 631 70403 1 0 0 chr2R 6064867 6073120 -15073588 - ROO_I LTR Pao 0 8256 1 1 631 3742 2 0 0 chr2R 6073120 6073548 -15073160 - ROO_LTR LTR Pao 0 428 1 1 631 207 69 0 0 chr2R 6074413 6074442 -15072266 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 631 21 36 0 0 chr2R 6078446 6078474 -15068234 + AT_rich Low_complexity Low_complexity 1 28 0 1 631 204 135 0 0 chr2R 6079825 6079862 -15066846 + (CGGAG)n Simple_repeat Simple_repeat 1 37 0 1 631 212 154 0 0 chr2R 6080160 6080199 -15066509 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 1 631 251 207 36 24 chr2R 6084336 6084420 -15062288 + ROO_I LTR Pao 641 725 -7531 1 631 208 240 0 0 chr2R 6085417 6085467 -15061241 + (TGG)n Simple_repeat Simple_repeat 1 50 0 1 631 30 0 0 0 chr2R 6087111 6087141 -15059567 + AT_rich Low_complexity Low_complexity 1 30 0 1 631 260 155 56 0 chr2R 6091555 6091626 -15055082 + T-rich Low_complexity Low_complexity 3 77 0 1 631 201 240 0 0 chr2R 6091857 6091932 -15054776 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 631 22 0 0 0 chr2R 6092857 6092879 -15053829 + AT_rich Low_complexity Low_complexity 1 22 0 1 631 279 133 0 0 chr2R 6094002 6094047 -15052661 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 631 225 65 0 0 chr2R 6094407 6094438 -15052270 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 631 183 129 0 0 chr2R 6095042 6095073 -15051635 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 631 25 51 0 0 chr2R 6097644 6097683 -15049025 + AT_rich Low_complexity Low_complexity 1 39 0 1 631 237 98 0 0 chr2R 6098628 6098669 -15048039 + (CAG)n Simple_repeat Simple_repeat 3 43 0 1 631 21 89 0 0 chr2R 6099532 6099588 -15047120 + AT_rich Low_complexity Low_complexity 1 56 0 1 631 186 43 0 0 chr2R 6100761 6100784 -15045924 + (CATA)n Simple_repeat Simple_repeat 4 26 0 1 631 212 233 0 14 chr2R 6101445 6101519 -15045189 + (CTG)n Simple_repeat Simple_repeat 3 75 0 1 631 212 204 19 0 chr2R 6102883 6102937 -15043771 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 631 222 213 0 0 chr2R 6104604 6104651 -15042057 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 631 23 54 0 0 chr2R 6107588 6107625 -15039083 + AT_rich Low_complexity Low_complexity 1 37 0 1 631 225 94 0 0 chr2R 6109518 6109550 -15037158 + (ACTG)n Simple_repeat Simple_repeat 2 33 0 1 631 246 32 0 0 chr2R 6110404 6110435 -15036273 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 631 257 190 17 0 chr2R 6110660 6110718 -15035990 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 631 213 216 10 30 chr2R 6110983 6111083 -15035625 + (TTG)n Simple_repeat Simple_repeat 2 99 0 1 631 230 212 8 34 chr2R 6111090 6111207 -15035501 - ROO_I LTR Pao -7504 752 639 1 631 25 0 0 0 chr2R 6111648 6111673 -15035035 + AT_rich Low_complexity Low_complexity 1 25 0 1 631 213 132 0 0 chr2R 6112645 6112683 -15034025 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 631 238 264 28 0 chr2R 6112968 6113040 -15033668 + (CTG)n Simple_repeat Simple_repeat 3 76 0 1 631 206 128 0 25 chr2R 6115286 6115326 -15031382 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 631 28 0 0 0 chr2R 6116572 6116600 -15030108 + AT_rich Low_complexity Low_complexity 1 28 0 1 631 239 122 20 0 chr2R 6118856 6118905 -15027803 + (CTG)n Simple_repeat Simple_repeat 3 52 0 1 631 240 179 18 0 chr2R 6119002 6119058 -15027650 - ROO_I LTR Pao -7547 709 653 1 631 241 194 0 40 chr2R 6119592 6119667 -15027041 - ROO_I LTR Pao -7533 723 652 1 631 228 67 0 0 chr2R 6119862 6119892 -15026816 + (CTG)n Simple_repeat Simple_repeat 1 30 0 1 631 585 94 0 0 chr2R 6121480 6121565 -15025143 + (CTG)n Simple_repeat Simple_repeat 3 87 0 1 631 30 83 0 0 chr2R 6122552 6122624 -15024084 + AT_rich Low_complexity Low_complexity 1 72 0 1 631 24 32 0 0 chr2R 6124283 6124314 -15022394 + AT_rich Low_complexity Low_complexity 1 31 0 1 631 210 250 0 30 chr2R 6125886 6125952 -15020756 + GA-rich Low_complexity Low_complexity 2 65 0 1 631 21 57 0 0 chr2R 6126982 6127017 -15019691 + AT_rich Low_complexity Low_complexity 1 35 0 1 631 57 39 0 0 chr2R 6127039 6127117 -15019591 + AT_rich Low_complexity Low_complexity 1 78 0 1 631 21 57 0 0 chr2R 6127424 6127459 -15019249 + AT_rich Low_complexity Low_complexity 1 35 0 1 631 38 22 0 0 chr2R 6127510 6127555 -15019153 + AT_rich Low_complexity Low_complexity 1 45 0 1 631 39 38 0 0 chr2R 6129066 6129119 -15017589 + AT_rich Low_complexity Low_complexity 1 53 0 1 631 209 128 26 0 chr2R 6132251 6132290 -15014418 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 631 27 0 0 0 chr2R 6143357 6143384 -15003324 + AT_rich Low_complexity Low_complexity 1 27 0 1 631 203 114 23 0 chr2R 6143495 6143539 -15003169 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 631 25 31 0 0 chr2R 6146319 6146351 -15000357 + AT_rich Low_complexity Low_complexity 1 32 0 1 631 280 198 31 10 chr2R 6147237 6147334 -14999374 + (CAA)n Simple_repeat Simple_repeat 3 101 0 1 631 252 253 0 0 chr2R 6147806 6147889 -14998819 + ROO_I LTR Pao 642 724 -7532 1 631 24 53 0 0 chr2R 6148056 6148094 -14998614 + AT_rich Low_complexity Low_complexity 1 38 0 1 631 32 57 0 0 chr2R 6149182 6149235 -14997473 + AT_rich Low_complexity Low_complexity 1 53 0 1 631 247 171 21 74 chr2R 6149322 6149417 -14997291 + A-rich Low_complexity Low_complexity 3 92 0 1 631 46 33 0 0 chr2R 6149498 6149558 -14997150 + AT_rich Low_complexity Low_complexity 1 60 0 1 631 23 33 0 0 chr2R 6149586 6149616 -14997092 + AT_rich Low_complexity Low_complexity 1 30 0 1 631 238 224 7 69 chr2R 6149620 6149764 -14996944 + A-rich Low_complexity Low_complexity 4 138 0 1 631 279 245 12 61 chr2R 6149817 6150032 -14996676 + A-rich Low_complexity Low_complexity 1 204 0 1 631 213 257 20 34 chr2R 6149951 6150100 -14996608 + (TAAA)n Simple_repeat Simple_repeat 2 148 0 1 632 24 0 0 0 chr2R 6161176 6161200 -14985508 + AT_rich Low_complexity Low_complexity 1 24 0 1 632 182 128 26 0 chr2R 6163859 6163898 -14982810 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 632 21 36 0 0 chr2R 6166542 6166570 -14980138 + AT_rich Low_complexity Low_complexity 1 28 0 1 632 211 277 0 38 chr2R 6169419 6169524 -14977184 + C-rich Low_complexity Low_complexity 2 102 0 1 632 183 80 0 0 chr2R 6178060 6178085 -14968623 + (CAAGC)n Simple_repeat Simple_repeat 4 28 0 1 632 21 0 0 0 chr2R 6179537 6179558 -14967150 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 26 0 0 0 chr2R 6180448 6180474 -14966234 + AT_rich Low_complexity Low_complexity 1 26 0 1 632 207 196 0 0 chr2R 6184041 6184087 -14962621 + (CCA)n Simple_repeat Simple_repeat 2 47 0 1 632 256 237 0 38 chr2R 6189421 6189500 -14957208 + ROO_I LTR Pao 667 742 -7514 1 632 45 0 0 0 chr2R 6192690 6192735 -14953973 + AT_rich Low_complexity Low_complexity 1 45 0 1 632 198 91 0 0 chr2R 6200045 6200078 -14946630 + (TCC)n Simple_repeat Simple_repeat 2 34 0 1 632 237 228 12 25 chr2R 6212152 6212233 -14934475 + (TTG)n Simple_repeat Simple_repeat 2 81 0 1 632 198 209 0 0 chr2R 6215063 6215106 -14931602 + T-rich Low_complexity Low_complexity 4 46 0 1 632 205 167 0 0 chr2R 6215658 6215694 -14931014 + GA-rich Low_complexity Low_complexity 2 37 0 1 632 330 173 0 0 chr2R 6218592 6218667 -14928041 + (CAG)n Simple_repeat Simple_repeat 3 77 0 1 632 262 203 6 54 chr2R 6221325 6221490 -14925218 + (TTG)n Simple_repeat Simple_repeat 1 157 0 1 632 228 35 0 0 chr2R 6222343 6222372 -14924336 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 632 245 155 0 17 chr2R 6227387 6227446 -14919262 + (TCTG)n Simple_repeat Simple_repeat 4 61 0 1 632 21 0 0 0 chr2R 6228681 6228702 -14918006 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 189 0 0 0 chr2R 6236438 6236459 -14910249 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 632 546 185 0 53 chr2R 6241230 6241401 -14905307 + GA-rich Low_complexity Low_complexity 5 166 0 1 632 234 156 0 0 chr2R 6244021 6244066 -14902642 + CT-rich Low_complexity Low_complexity 1 45 0 1 632 195 42 0 0 chr2R 6251318 6251342 -14895366 + (ATG)n Simple_repeat Simple_repeat 3 26 0 1 632 26 0 0 0 chr2R 6251576 6251602 -14895106 + AT_rich Low_complexity Low_complexity 1 26 0 1 632 255 31 0 0 chr2R 6253956 6253988 -14892720 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 632 21 71 0 0 chr2R 6258116 6258158 -14888550 + AT_rich Low_complexity Low_complexity 1 42 0 1 632 218 148 19 0 chr2R 6261273 6261327 -14885381 + (TTTG)n Simple_repeat Simple_repeat 3 57 0 1 632 24 32 0 0 chr2R 6263613 6263644 -14883064 + AT_rich Low_complexity Low_complexity 1 31 0 1 632 25 31 0 0 chr2R 6265414 6265446 -14881262 + AT_rich Low_complexity Low_complexity 1 32 0 1 632 33 0 0 0 chr2R 6273231 6273264 -14873444 + AT_rich Low_complexity Low_complexity 1 33 0 1 632 23 54 0 0 chr2R 6274773 6274810 -14871898 + AT_rich Low_complexity Low_complexity 1 37 0 1 632 198 0 0 0 chr2R 6280583 6280605 -14866103 + (T)n Simple_repeat Simple_repeat 1 22 0 1 632 22 0 0 0 chr2R 6285952 6285974 -14860734 + AT_rich Low_complexity Low_complexity 1 22 0 1 632 225 0 0 0 chr2R 6286005 6286030 -14860678 + (C)n Simple_repeat Simple_repeat 1 25 0 1 632 29 0 0 0 chr2R 6289389 6289418 -14857290 + AT_rich Low_complexity Low_complexity 1 29 0 1 632 25 0 0 0 chr2R 6289433 6289458 -14857250 + AT_rich Low_complexity Low_complexity 1 25 0 1 632 189 0 0 0 chr2R 6290140 6290161 -14856547 + (CTCA)n Simple_repeat Simple_repeat 4 24 0 1 632 188 130 22 0 chr2R 6290427 6290473 -14856235 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 633 24 32 0 0 chr2R 6298898 6298929 -14847779 + AT_rich Low_complexity Low_complexity 1 31 0 1 633 275 202 0 0 chr2R 6299819 6299908 -14846800 - ROO_I LTR Pao -7527 729 641 1 633 351 96 0 0 chr2R 6300796 6300848 -14845860 + (CAAA)n Simple_repeat Simple_repeat 3 54 0 1 633 28 48 0 0 chr2R 6302525 6302567 -14844141 + AT_rich Low_complexity Low_complexity 1 42 0 1 633 200 262 12 23 chr2R 6302720 6302806 -14843902 + (TTG)n Simple_repeat Simple_repeat 1 85 0 1 633 34 72 0 0 chr2R 6303531 6303600 -14843108 + AT_rich Low_complexity Low_complexity 1 69 0 1 633 207 68 43 64 chr2R 6304516 6304563 -14842145 + (CAAAG)n Simple_repeat Simple_repeat 2 47 0 1 633 24 53 0 0 chr2R 6305084 6305122 -14841586 + AT_rich Low_complexity Low_complexity 1 38 0 1 633 27 29 0 0 chr2R 6307239 6307273 -14839435 + AT_rich Low_complexity Low_complexity 1 34 0 1 633 553 213 115 6 chr2R 6307581 6307737 -14838971 - DNAREP1_DM LINE Penelope 0 594 422 1 633 473 167 0 0 chr2R 6307769 6307853 -14838855 - DNAREP1_DM LINE Penelope -510 84 1 1 633 24 91 0 0 chr2R 6312946 6313012 -14833696 + AT_rich Low_complexity Low_complexity 1 66 0 1 633 286 122 13 26 chr2R 6313494 6313570 -14833138 - DNAREP1_DM LINE Penelope -310 284 210 1 633 288 250 70 31 chr2R 6313677 6313805 -14832903 + HOBO DNA hAT 2868 3000 -16 1 633 1246 127 105 33 chr2R 6313807 6314083 -14832625 - DNAREP1_DM LINE Penelope -292 302 7 1 633 404 187 126 36 chr2R 6314129 6314240 -14832468 - DNAREP1_DM LINE Penelope -50 544 424 1 633 21 57 0 0 chr2R 6314273 6314308 -14832400 + AT_rich Low_complexity Low_complexity 1 35 0 1 633 31 76 0 0 chr2R 6314348 6314414 -14832294 + AT_rich Low_complexity Low_complexity 1 66 0 1 633 204 139 0 27 chr2R 6315515 6315552 -14831156 + (TATG)n Simple_repeat Simple_repeat 4 39 0 1 633 219 283 18 28 chr2R 6317421 6317530 -14829178 + (CGTG)n Simple_repeat Simple_repeat 3 110 0 1 633 192 179 0 0 chr2R 6318129 6318168 -14828540 + (CAG)n Simple_repeat Simple_repeat 2 40 0 1 633 206 213 0 0 chr2R 6318900 6318947 -14827761 + GA-rich Low_complexity Low_complexity 2 48 0 1 633 309 185 0 0 chr2R 6319052 6319117 -14827591 + (CAA)n Simple_repeat Simple_repeat 1 65 0 1 633 278 234 0 0 chr2R 6323070 6323158 -14823550 + (CGG)n Simple_repeat Simple_repeat 1 88 0 1 633 24 67 0 0 chr2R 6325010 6325055 -14821653 + AT_rich Low_complexity Low_complexity 1 45 0 1 633 29 47 0 0 chr2R 6325093 6325136 -14821572 + AT_rich Low_complexity Low_complexity 1 43 0 1 633 29 47 0 0 chr2R 6325301 6325344 -14821364 + AT_rich Low_complexity Low_complexity 1 43 0 1 633 23 33 0 0 chr2R 6325351 6325381 -14821327 + AT_rich Low_complexity Low_complexity 1 30 0 1 633 233 222 14 27 chr2R 6325882 6325956 -14820752 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 633 205 178 0 0 chr2R 6326154 6326199 -14820509 + A-rich Low_complexity Low_complexity 1 45 0 1 633 24 0 0 0 chr2R 6327909 6327933 -14818775 + AT_rich Low_complexity Low_complexity 1 24 0 1 633 22 0 0 0 chr2R 6330485 6330507 -14816201 + AT_rich Low_complexity Low_complexity 1 22 0 1 633 28 61 0 0 chr2R 6331944 6331993 -14814715 + AT_rich Low_complexity Low_complexity 1 49 0 1 633 324 158 0 0 chr2R 6340462 6340519 -14806189 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 633 233 278 14 0 chr2R 6341279 6341351 -14805357 + (CAGT)n Simple_repeat Simple_repeat 4 76 0 1 633 194 105 26 0 chr2R 6345081 6345119 -14801589 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 633 21 36 0 0 chr2R 6346761 6346789 -14799919 + AT_rich Low_complexity Low_complexity 1 28 0 1 633 264 120 0 0 chr2R 6348102 6348152 -14798556 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 633 341 123 15 0 chr2R 6349922 6349987 -14796721 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 633 197 149 0 41 chr2R 6350171 6350220 -14796488 + A-rich Low_complexity Low_complexity 2 48 0 1 633 24 0 0 0 chr2R 6350769 6350793 -14795915 + AT_rich Low_complexity Low_complexity 1 24 0 1 633 27 0 0 0 chr2R 6351924 6351951 -14794757 + AT_rich Low_complexity Low_complexity 1 27 0 1 633 37 39 0 0 chr2R 6352812 6352863 -14793845 + AT_rich Low_complexity Low_complexity 1 51 0 1 633 23 0 0 0 chr2R 6352922 6352945 -14793763 + AT_rich Low_complexity Low_complexity 1 23 0 1 633 24 0 0 0 chr2R 6358829 6358853 -14787855 + AT_rich Low_complexity Low_complexity 1 24 0 1 633 21 0 0 0 chr2R 6361392 6361413 -14785295 + AT_rich Low_complexity Low_complexity 1 21 0 1 633 225 200 0 0 chr2R 6361796 6361841 -14784867 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 633 301 118 0 42 chr2R 6363087 6363158 -14783550 + (GTATG)n Simple_repeat Simple_repeat 5 72 0 1 633 27 87 0 0 chr2R 6365030 6365099 -14781609 + AT_rich Low_complexity Low_complexity 1 69 0 1 633 26 0 0 0 chr2R 6372505 6372531 -14774177 + AT_rich Low_complexity Low_complexity 1 26 0 1 633 35 0 0 0 chr2R 6372615 6372650 -14774058 + AT_rich Low_complexity Low_complexity 1 35 0 1 633 217 234 0 15 chr2R 6372838 6372903 -14773805 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 633 241 109 18 18 chr2R 6374687 6374743 -14771965 + (TAAAAA)n Simple_repeat Simple_repeat 3 58 0 1 633 332 200 0 0 chr2R 6378202 6378287 -14768421 - ROO_I LTR Pao -7522 734 650 1 633 21 57 0 0 chr2R 6380200 6380235 -14766473 + AT_rich Low_complexity Low_complexity 1 35 0 1 633 31 44 0 0 chr2R 6380867 6380912 -14765796 + AT_rich Low_complexity Low_complexity 1 45 0 1 633 26 64 0 0 chr2R 6381487 6381534 -14765174 + AT_rich Low_complexity Low_complexity 1 47 0 1 633 21 0 0 0 chr2R 6383293 6383314 -14763394 + AT_rich Low_complexity Low_complexity 1 21 0 1 633 279 179 0 0 chr2R 6383732 6383799 -14762909 + T-rich Low_complexity Low_complexity 1 67 0 1 633 224 137 20 0 chr2R 6384387 6384438 -14762270 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 633 257 279 0 0 chr2R 6384855 6384934 -14761774 + (CCA)n Simple_repeat Simple_repeat 3 81 0 1 633 312 120 0 0 chr2R 6384966 6385016 -14761692 + (CTG)n Simple_repeat Simple_repeat 3 52 0 1 633 27 29 0 0 chr2R 6385607 6385641 -14761067 + AT_rich Low_complexity Low_complexity 1 34 0 1 633 209 151 0 19 chr2R 6385856 6385910 -14760798 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 633 33 0 0 0 chr2R 6385934 6385967 -14760741 + AT_rich Low_complexity Low_complexity 1 33 0 1 633 354 61 0 0 chr2R 6386457 6386506 -14760202 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1 633 194 116 23 0 chr2R 6386810 6386853 -14759855 + (CAT)n Simple_repeat Simple_repeat 1 44 0 1 633 22 35 0 0 chr2R 6387474 6387503 -14759205 + AT_rich Low_complexity Low_complexity 1 29 0 1 633 31 26 0 0 chr2R 6387664 6387702 -14759006 + AT_rich Low_complexity Low_complexity 1 38 0 1 633 183 80 0 0 chr2R 6387807 6387832 -14758876 + (T)n Simple_repeat Simple_repeat 1 25 0 1 633 186 240 0 0 chr2R 6388175 6388225 -14758483 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 633 213 259 0 0 chr2R 6388784 6388842 -14757866 + (CTG)n Simple_repeat Simple_repeat 1 58 0 1 633 272 192 50 25 chr2R 6389365 6389445 -14757263 - ROO_I LTR Pao -7532 724 643 1 633 31 0 0 0 chr2R 6390384 6390415 -14756293 + AT_rich Low_complexity Low_complexity 1 31 0 1 633 21 0 0 0 chr2R 6390464 6390485 -14756223 + AT_rich Low_complexity Low_complexity 1 21 0 1 633 21 95 0 0 chr2R 6391002 6391065 -14755643 + AT_rich Low_complexity Low_complexity 1 63 0 1 633 246 62 0 0 chr2R 6391605 6391637 -14755071 + (ACTG)n Simple_repeat Simple_repeat 1 32 0 1 633 411 92 0 0 chr2R 6391940 6392005 -14754703 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 633 226 250 0 0 chr2R 6393697 6393753 -14752955 + A-rich Low_complexity Low_complexity 1 56 0 1 633 29 0 0 0 chr2R 6394168 6394197 -14752511 + AT_rich Low_complexity Low_complexity 1 29 0 1 633 186 133 0 0 chr2R 6394314 6394344 -14752364 + (TTCGGG)n Simple_repeat Simple_repeat 4 33 0 1 633 22 35 0 0 chr2R 6395324 6395353 -14751355 + AT_rich Low_complexity Low_complexity 1 29 0 1 633 208 170 0 21 chr2R 6396257 6396305 -14750403 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 633 194 111 0 62 chr2R 6398790 6398838 -14747870 + T-rich Low_complexity Low_complexity 1 45 0 1 633 28 0 0 0 chr2R 6399352 6399380 -14747328 + AT_rich Low_complexity Low_complexity 1 28 0 1 633 263 152 0 33 chr2R 6399791 6399852 -14746856 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 1 633 21 0 0 0 chr2R 6400157 6400178 -14746530 + AT_rich Low_complexity Low_complexity 1 21 0 1 633 186 43 0 0 chr2R 6401027 6401050 -14745658 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 633 33 43 0 0 chr2R 6401054 6401101 -14745607 + AT_rich Low_complexity Low_complexity 1 47 0 1 633 252 130 0 0 chr2R 6401475 6401521 -14745187 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 633 245 241 12 25 chr2R 6401658 6401739 -14744969 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 1 633 33 43 0 0 chr2R 6402112 6402159 -14744549 + AT_rich Low_complexity Low_complexity 1 47 0 1 633 191 88 0 29 chr2R 6402205 6402240 -14744468 + (TTCTG)n Simple_repeat Simple_repeat 2 35 0 1 633 23 33 0 0 chr2R 6402323 6402353 -14744355 + AT_rich Low_complexity Low_complexity 1 30 0 1 633 281 306 0 0 chr2R 6402409 6402530 -14744178 + T-rich Low_complexity Low_complexity 1 121 0 1 633 210 91 0 0 chr2R 6402879 6402912 -14743796 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 633 210 91 0 0 chr2R 6403197 6403230 -14743478 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 633 21 0 0 0 chr2R 6403645 6403666 -14743042 + AT_rich Low_complexity Low_complexity 1 21 0 1 633 39 22 0 0 chr2R 6405955 6406001 -14740707 + AT_rich Low_complexity Low_complexity 1 46 0 1 633 204 203 15 30 chr2R 6406790 6406856 -14739852 + (TAG)n Simple_repeat Simple_repeat 1 65 0 1 633 213 135 27 0 chr2R 6408825 6408862 -14737846 + (ATGTG)n Simple_repeat Simple_repeat 1 38 0 1 633 25 90 0 0 chr2R 6409296 6409363 -14737345 + AT_rich Low_complexity Low_complexity 1 67 0 1 633 25 108 0 0 chr2R 6409441 6409543 -14737165 + AT_rich Low_complexity Low_complexity 1 102 0 1 633 24 32 0 0 chr2R 6409616 6409647 -14737061 + AT_rich Low_complexity Low_complexity 1 31 0 1 633 192 250 0 0 chr2R 6409971 6410035 -14736673 + (CTG)n Simple_repeat Simple_repeat 1 64 0 1 633 205 175 25 0 chr2R 6410295 6410335 -14736373 + (CTG)n Simple_repeat Simple_repeat 3 43 0 1 633 35 54 0 0 chr2R 6411047 6411103 -14735605 + AT_rich Low_complexity Low_complexity 1 56 0 1 633 225 65 0 0 chr2R 6417066 6417097 -14729611 + (T)n Simple_repeat Simple_repeat 1 31 0 1 633 226 167 0 20 chr2R 6418166 6418215 -14728493 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 634 23 33 0 0 chr2R 6424198 6424228 -14722480 + AT_rich Low_complexity Low_complexity 1 30 0 1 634 219 159 23 0 chr2R 6425531 6425575 -14721133 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 634 243 88 0 0 chr2R 6425793 6425827 -14720881 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 634 243 0 0 0 chr2R 6426776 6426803 -14719905 + (A)n Simple_repeat Simple_repeat 1 27 0 1 634 355 284 9 0 chr2R 6431455 6431571 -14715137 + (TA)n Simple_repeat Simple_repeat 1 117 0 1 634 183 80 0 0 chr2R 6433623 6433648 -14713060 + (CAT)n Simple_repeat Simple_repeat 1 25 0 1 634 186 43 0 0 chr2R 6434711 6434734 -14711974 + (CCG)n Simple_repeat Simple_repeat 3 25 0 1 634 186 103 0 0 chr2R 6434969 6434998 -14711710 + (AACTG)n Simple_repeat Simple_repeat 3 31 0 1 634 31 26 0 0 chr2R 6435321 6435359 -14711349 + AT_rich Low_complexity Low_complexity 1 38 0 1 634 183 80 0 0 chr2R 6436030 6436055 -14710653 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 634 203 152 0 0 chr2R 6437126 6437159 -14709549 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 634 28 29 0 0 chr2R 6437573 6437608 -14709100 + AT_rich Low_complexity Low_complexity 1 35 0 1 634 264 137 0 0 chr2R 6439490 6439541 -14707167 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 634 23 68 0 0 chr2R 6439802 6439846 -14706862 + AT_rich Low_complexity Low_complexity 1 44 0 1 634 448 119 0 0 chr2R 6440243 6440310 -14706398 - DNAREP1_DM LINE Penelope -527 67 1 1 634 366 176 0 0 chr2R 6440471 6440556 -14706152 + (CATA)n Simple_repeat Simple_repeat 3 87 0 1 634 252 111 0 0 chr2R 6441589 6441634 -14705074 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 634 217 234 0 0 chr2R 6441883 6441930 -14704778 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 634 21 0 0 0 chr2R 6442230 6442251 -14704457 + AT_rich Low_complexity Low_complexity 1 21 0 1 634 24 32 0 0 chr2R 6442303 6442334 -14704374 + AT_rich Low_complexity Low_complexity 1 31 0 1 634 216 163 0 0 chr2R 6442870 6442913 -14703795 + CT-rich Low_complexity Low_complexity 1 43 0 1 634 189 0 0 0 chr2R 6443015 6443036 -14703672 + (TTG)n Simple_repeat Simple_repeat 3 23 0 1 634 24 0 0 0 chr2R 6444922 6444946 -14701762 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 24 0 0 0 chr2R 6445429 6445453 -14701255 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 191 167 24 0 chr2R 6445673 6445715 -14700993 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 634 207 301 16 24 chr2R 6445748 6445874 -14700834 + A-rich Low_complexity Low_complexity 2 126 0 1 634 203 280 40 0 chr2R 6446409 6446484 -14700224 + CT-rich Low_complexity Low_complexity 1 78 0 1 634 22 56 0 0 chr2R 6446839 6446875 -14699833 + AT_rich Low_complexity Low_complexity 1 36 0 1 634 25 31 0 0 chr2R 6450660 6450692 -14696016 + AT_rich Low_complexity Low_complexity 1 32 0 1 634 23 92 0 0 chr2R 6451404 6451469 -14695239 + AT_rich Low_complexity Low_complexity 1 65 0 1 634 218 173 56 90 chr2R 6452368 6452457 -14694251 + T-rich Low_complexity Low_complexity 6 91 0 1 634 203 152 0 0 chr2R 6452476 6452509 -14694199 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 634 30 69 0 0 chr2R 6453845 6453903 -14692805 + AT_rich Low_complexity Low_complexity 1 58 0 1 634 219 241 0 0 chr2R 6454145 6454199 -14692509 + CT-rich Low_complexity Low_complexity 2 55 0 1 634 189 107 0 0 chr2R 6454660 6454688 -14692020 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 634 24 0 0 0 chr2R 6454928 6454952 -14691756 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 186 133 0 0 chr2R 6456259 6456289 -14690419 + (CCG)n Simple_repeat Simple_repeat 2 31 0 1 634 242 161 0 35 chr2R 6456332 6456390 -14690318 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 634 25 0 0 0 chr2R 6461691 6461716 -14684992 + AT_rich Low_complexity Low_complexity 1 25 0 1 634 180 0 0 0 chr2R 6461910 6461930 -14684778 + (T)n Simple_repeat Simple_repeat 1 20 0 1 634 195 69 0 0 chr2R 6462822 6462851 -14683857 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 634 217 254 0 0 chr2R 6464579 6464634 -14682074 + T-rich Low_complexity Low_complexity 1 55 0 1 634 195 69 0 0 chr2R 6465412 6465441 -14681267 + (TAG)n Simple_repeat Simple_repeat 3 31 0 1 634 198 0 0 0 chr2R 6467502 6467524 -14679184 + (CAGTT)n Simple_repeat Simple_repeat 4 25 0 1 634 22 0 0 0 chr2R 6468882 6468904 -14677804 + AT_rich Low_complexity Low_complexity 1 22 0 1 634 225 146 0 40 chr2R 6469367 6469417 -14677291 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 634 217 224 0 43 chr2R 6470172 6470242 -14676466 + (CAA)n Simple_repeat Simple_repeat 2 68 0 1 634 279 343 0 38 chr2R 6470408 6470593 -14676115 + (CAG)n Simple_repeat Simple_repeat 2 179 0 1 634 201 154 0 0 chr2R 6470625 6470664 -14676044 + (CAA)n Simple_repeat Simple_repeat 2 40 0 1 634 180 0 0 0 chr2R 6470774 6470794 -14675914 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 634 181 210 0 31 chr2R 6471081 6471145 -14675563 + (CAG)n Simple_repeat Simple_repeat 2 63 0 1 634 189 74 0 0 chr2R 6471966 6471993 -14674715 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 634 252 86 0 0 chr2R 6472676 6472711 -14673997 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 634 186 133 0 0 chr2R 6473051 6473081 -14673627 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 634 3790 5 0 0 chr2R 6473117 6473534 -14673174 - TIRANT_LTR LTR Gypsy 0 417 1 1 634 71254 0 0 0 chr2R 6473534 6481226 -14665482 - TIRANT_I LTR Gypsy 0 7692 1 1 634 3790 5 0 0 chr2R 6481226 6481643 -14665065 - TIRANT_LTR LTR Gypsy 0 417 1 1 634 25 51 0 0 chr2R 6482810 6482849 -14663859 + AT_rich Low_complexity Low_complexity 1 39 0 1 634 231 191 0 0 chr2R 6483901 6483964 -14662744 + GA-rich Low_complexity Low_complexity 2 64 0 1 634 192 40 0 0 chr2R 6484885 6484910 -14661798 + (TTC)n Simple_repeat Simple_repeat 2 26 0 1 634 234 0 0 0 chr2R 6485540 6485566 -14661142 + (GCTG)n Simple_repeat Simple_repeat 1 26 0 1 634 24 0 0 0 chr2R 6485962 6485986 -14660722 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 423 68 0 0 chr2R 6487212 6487271 -14659437 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 634 21 0 0 0 chr2R 6488019 6488040 -14658668 + AT_rich Low_complexity Low_complexity 1 21 0 1 634 330 26 0 0 chr2R 6488207 6488246 -14658462 + (A)n Simple_repeat Simple_repeat 1 39 0 1 634 260 104 42 0 chr2R 6488375 6488423 -14658285 + (CATA)n Simple_repeat Simple_repeat 1 50 0 1 634 218 194 0 16 chr2R 6488584 6488647 -14658061 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 634 37 0 0 0 chr2R 6488971 6489008 -14657700 + AT_rich Low_complexity Low_complexity 1 37 0 1 634 180 0 0 0 chr2R 6489069 6489089 -14657619 + (A)n Simple_repeat Simple_repeat 1 20 0 1 634 27 49 0 0 chr2R 6489102 6489143 -14657565 + AT_rich Low_complexity Low_complexity 1 41 0 1 634 384 158 0 0 chr2R 6489363 6489439 -14657269 + (TCG)n Simple_repeat Simple_repeat 2 77 0 1 634 192 97 0 0 chr2R 6489800 6489831 -14656877 + (CATCC)n Simple_repeat Simple_repeat 2 32 0 1 634 22 0 0 0 chr2R 6491349 6491371 -14655337 + AT_rich Low_complexity Low_complexity 1 22 0 1 634 206 235 0 0 chr2R 6491792 6491843 -14654865 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 634 208 147 0 0 chr2R 6492723 6492757 -14653951 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 634 192 40 0 0 chr2R 6495956 6495981 -14650727 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 634 418 133 0 30 chr2R 6498237 6498338 -14648370 + (CAG)n Simple_repeat Simple_repeat 1 98 0 1 634 246 160 0 0 chr2R 6499640 6499690 -14647018 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 634 265 182 0 11 chr2R 6499721 6499810 -14646898 + ROO_I LTR Pao 641 728 -7528 1 634 237 65 0 0 chr2R 6502180 6502211 -14644497 + (CAG)n Simple_repeat Simple_repeat 3 33 0 1 634 28 29 0 0 chr2R 6504492 6504527 -14642181 + AT_rich Low_complexity Low_complexity 1 35 0 1 634 198 71 0 0 chr2R 6506080 6506108 -14640600 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 634 423 100 0 0 chr2R 6509927 6509997 -14636711 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 634 2970 17 0 0 chr2R 6509997 6510353 -14636355 + MDG1_LTR LTR Gypsy 87 442 0 1 634 36549 5 3 1 chr2R 6510353 6514702 -14632006 + MDG1_I LTR Gypsy 1 4357 -2239 1 634 2984 14 0 0 chr2R 6514702 6515058 -14631650 - MDG1_LTR LTR Gypsy 0 442 87 1 634 423 100 0 0 chr2R 6515058 6515128 -14631580 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 634 16832 10 53 1 chr2R 6515132 6517276 -14629432 - MDG1_I LTR Gypsy -98 6799 4354 1 634 423 100 0 0 chr2R 6517292 6517362 -14629346 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 634 2984 14 0 0 chr2R 6517362 6517718 -14628990 + MDG1_LTR LTR Gypsy 87 442 0 1 634 53254 7 22 1 chr2R 6517718 6524189 -14622519 + MDG1_I LTR Gypsy 1 6799 -98 1 634 423 100 0 0 chr2R 6524193 6524263 -14622445 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 634 2957 20 0 0 chr2R 6524263 6524619 -14622089 + MDG1_LTR LTR Gypsy 87 442 0 1 634 32 0 0 0 chr2R 6524697 6524729 -14621979 + AT_rich Low_complexity Low_complexity 1 32 0 1 634 192 111 0 0 chr2R 6525059 6525095 -14621613 + (GGA)n Simple_repeat Simple_repeat 1 36 0 1 634 23 92 0 0 chr2R 6539231 6539296 -14607412 + AT_rich Low_complexity Low_complexity 1 65 0 1 634 183 80 0 0 chr2R 6540946 6540971 -14605737 + (A)n Simple_repeat Simple_repeat 1 25 0 1 634 34 42 0 0 chr2R 6542748 6542796 -14603912 + AT_rich Low_complexity Low_complexity 1 48 0 1 634 22 35 0 0 chr2R 6544734 6544763 -14601945 + AT_rich Low_complexity Low_complexity 1 29 0 1 634 194 128 26 0 chr2R 6545746 6545785 -14600923 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 634 286 256 96 81 chr2R 6546601 6546737 -14599971 + DNAREP1_DM LINE Penelope 394 531 -63 1 634 423 100 0 0 chr2R 6546772 6546842 -14599866 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 634 2970 17 0 0 chr2R 6546842 6547198 -14599510 + MDG1_LTR LTR Gypsy 87 442 0 1 79 53787 7 14 3 chr2R 6547198 6553729 -14592979 + MDG1_I LTR Gypsy 1 6799 -98 1 635 423 100 0 0 chr2R 6553733 6553803 -14592905 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 635 2970 17 0 0 chr2R 6553803 6554159 -14592549 + MDG1_LTR LTR Gypsy 87 442 0 1 635 201 74 0 0 chr2R 6554716 6554743 -14591965 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1 635 221 163 0 0 chr2R 6555595 6555656 -14591052 + (CCCTAG)n Simple_repeat Simple_repeat 1 61 0 1 635 219 69 0 0 chr2R 6556742 6556771 -14589937 + (CACGC)n Simple_repeat Simple_repeat 3 31 0 1 635 21 0 0 0 chr2R 6560290 6560311 -14586397 + AT_rich Low_complexity Low_complexity 1 21 0 1 635 28 79 0 0 chr2R 6560449 6560512 -14586196 + AT_rich Low_complexity Low_complexity 1 63 0 1 635 229 200 0 0 chr2R 6562687 6562732 -14583976 + CT-rich Low_complexity Low_complexity 1 45 0 1 635 27 29 0 0 chr2R 6564291 6564325 -14582383 + AT_rich Low_complexity Low_complexity 1 34 0 1 635 21 36 0 0 chr2R 6567450 6567478 -14579230 + AT_rich Low_complexity Low_complexity 1 28 0 1 635 23 0 0 0 chr2R 6568853 6568876 -14577832 + AT_rich Low_complexity Low_complexity 1 23 0 1 635 321 26 0 0 chr2R 6570315 6570353 -14576355 + (CAT)n Simple_repeat Simple_repeat 3 40 0 1 635 206 233 0 11 chr2R 6570406 6570493 -14576215 + (TTG)n Simple_repeat Simple_repeat 2 87 0 1 635 270 164 0 0 chr2R 6570598 6570653 -14576055 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 635 207 114 0 0 chr2R 6570890 6570925 -14575783 + (CAGC)n Simple_repeat Simple_repeat 3 37 0 1 635 270 0 0 0 chr2R 6572365 6572395 -14574313 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 635 183 100 0 0 chr2R 6576916 6576946 -14569762 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1 635 26 30 0 0 chr2R 6577228 6577261 -14569447 + AT_rich Low_complexity Low_complexity 1 33 0 1 635 198 0 0 0 chr2R 6578238 6578260 -14568448 + (C)n Simple_repeat Simple_repeat 1 22 0 1 635 22 0 0 0 chr2R 6582350 6582372 -14564336 + AT_rich Low_complexity Low_complexity 1 22 0 1 635 25 0 0 0 chr2R 6586498 6586523 -14560185 + AT_rich Low_complexity Low_complexity 1 25 0 1 635 205 259 0 0 chr2R 6587483 6587537 -14559171 + (CACCAT)n Simple_repeat Simple_repeat 4 57 0 1 635 26 30 0 0 chr2R 6593675 6593708 -14553000 + AT_rich Low_complexity Low_complexity 1 33 0 1 635 287 65 0 21 chr2R 6593896 6593943 -14552765 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 635 25 31 0 0 chr2R 6595571 6595603 -14551105 + AT_rich Low_complexity Low_complexity 1 32 0 1 635 192 77 0 0 chr2R 6604577 6604603 -14542105 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 635 205 288 15 0 chr2R 6605395 6605461 -14541247 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 1 635 205 175 0 24 chr2R 6605538 6605579 -14541129 + CT-rich Low_complexity Low_complexity 2 41 0 1 635 207 0 0 0 chr2R 6605782 6605805 -14540903 + (CTA)n Simple_repeat Simple_repeat 3 25 0 1 635 282 106 0 0 chr2R 6605939 6605986 -14540722 + (ATTCG)n Simple_repeat Simple_repeat 5 51 0 1 635 329 161 11 44 chr2R 6607368 6607459 -14539249 + ROO_I LTR Pao 641 728 -7528 1 635 225 200 20 0 chr2R 6608903 6608953 -14537755 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1 635 212 213 26 39 chr2R 6609290 6609368 -14537340 + (TTTAG)n Simple_repeat Simple_repeat 4 80 0 1 635 24 32 0 0 chr2R 6610395 6610426 -14536282 + AT_rich Low_complexity Low_complexity 1 31 0 1 635 301 241 0 24 chr2R 6610510 6610595 -14536113 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 635 195 129 0 0 chr2R 6615280 6615311 -14531397 + (CCCGAA)n Simple_repeat Simple_repeat 1 31 0 1 635 228 163 0 0 chr2R 6616632 6616675 -14530033 + (ACTG)n Simple_repeat Simple_repeat 1 43 0 1 635 24 53 0 0 chr2R 6622634 6622672 -14524036 + AT_rich Low_complexity Low_complexity 1 38 0 1 635 207 0 0 0 chr2R 6624930 6624953 -14521755 + (A)n Simple_repeat Simple_repeat 1 23 0 1 635 29 0 0 0 chr2R 6633536 6633565 -14513143 + AT_rich Low_complexity Low_complexity 1 29 0 1 635 22 0 0 0 chr2R 6634298 6634320 -14512388 + AT_rich Low_complexity Low_complexity 1 22 0 1 635 180 77 0 0 chr2R 6634736 6634762 -14511946 + (T)n Simple_repeat Simple_repeat 1 26 0 1 635 183 188 0 0 chr2R 6636680 6636728 -14509980 + A-rich Low_complexity Low_complexity 3 50 0 1 635 246 105 0 0 chr2R 6641016 6641054 -14505654 + (CAGC)n Simple_repeat Simple_repeat 2 39 0 1 635 205 171 0 0 chr2R 6641839 6641874 -14504834 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 635 192 97 0 0 chr2R 6648042 6648073 -14498635 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 635 261 128 0 0 chr2R 6652531 6652578 -14494130 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 635 183 162 0 0 chr2R 6652732 6652769 -14493939 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 635 22 0 0 0 chr2R 6656087 6656109 -14490599 + AT_rich Low_complexity Low_complexity 1 22 0 1 635 31 44 0 0 chr2R 6658004 6658049 -14488659 + AT_rich Low_complexity Low_complexity 1 45 0 1 635 273 186 0 0 chr2R 6658991 6659061 -14487647 + (TTCA)n Simple_repeat Simple_repeat 1 70 0 1 635 207 69 0 0 chr2R 6659329 6659358 -14487350 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 635 207 69 0 0 chr2R 6659725 6659754 -14486954 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 635 233 196 0 35 chr2R 6665787 6665845 -14480863 + (CAACT)n Simple_repeat Simple_repeat 3 58 0 1 635 204 125 0 0 chr2R 6668149 6668181 -14478527 + (TTTTTA)n Simple_repeat Simple_repeat 3 34 0 1 635 29 84 0 0 chr2R 6669049 6669120 -14477588 + AT_rich Low_complexity Low_complexity 1 71 0 1 635 21 82 0 0 chr2R 6669145 6669194 -14477514 + AT_rich Low_complexity Low_complexity 1 49 0 1 635 45 45 0 0 chr2R 6670704 6670770 -14475938 + AT_rich Low_complexity Low_complexity 1 66 0 1 635 36 0 0 0 chr2R 6671018 6671054 -14475654 + AT_rich Low_complexity Low_complexity 1 36 0 1 635 27 0 0 0 chr2R 6671674 6671701 -14475007 + AT_rich Low_complexity Low_complexity 1 27 0 1 635 198 71 0 0 chr2R 6672132 6672160 -14474548 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1 635 26 74 0 0 chr2R 6673164 6673218 -14473490 + AT_rich Low_complexity Low_complexity 1 54 0 1 635 329 152 17 0 chr2R 6675975 6676034 -14470674 - DNAREP1_DM LINE Penelope 0 594 535 1 635 338 182 0 0 chr2R 6676231 6676286 -14470422 - DNAREP1_DM LINE Penelope -535 59 5 1 635 227 222 0 0 chr2R 6676662 6676707 -14470001 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 635 30 0 0 0 chr2R 6678196 6678226 -14468482 + AT_rich Low_complexity Low_complexity 1 30 0 1 635 26 0 0 0 chr2R 6678888 6678914 -14467794 + AT_rich Low_complexity Low_complexity 1 26 0 1 635 22 0 0 0 chr2R 6680752 6680774 -14465934 + AT_rich Low_complexity Low_complexity 1 22 0 1 635 21 0 0 0 chr2R 6681057 6681078 -14465630 + AT_rich Low_complexity Low_complexity 1 21 0 1 635 237 98 0 0 chr2R 6682022 6682063 -14464645 + (ATG)n Simple_repeat Simple_repeat 1 41 0 1 635 21 57 0 0 chr2R 6682316 6682351 -14464357 + AT_rich Low_complexity Low_complexity 1 35 0 1 635 420 130 188 135 chr2R 6682816 6682949 -14463759 + FB4_DM DNA Tc1 1 140 -3949 1 635 25 65 0 0 chr2R 6684558 6684604 -14462104 + AT_rich Low_complexity Low_complexity 1 46 0 1 636 26 50 0 0 chr2R 6685201 6685241 -14461467 + AT_rich Low_complexity Low_complexity 1 40 0 1 636 31 58 0 0 chr2R 6686019 6686071 -14460637 + AT_rich Low_complexity Low_complexity 1 52 0 1 636 236 208 51 25 chr2R 6689227 6689306 -14457402 + DNAREP1_DM LINE Penelope 413 493 -101 1 636 23 0 0 0 chr2R 6689435 6689458 -14457250 + AT_rich Low_complexity Low_complexity 1 23 0 1 636 616 160 240 26 chr2R 6689466 6689620 -14457088 + DNAREP1_DM LINE Penelope 399 585 -9 1 636 238 185 0 0 chr2R 6689762 6689843 -14456865 - ROO_I LTR Pao -7524 732 652 1 636 217 234 0 0 chr2R 6692685 6692732 -14453976 + CT-rich Low_complexity Low_complexity 3 49 0 1 636 23 0 0 0 chr2R 6693315 6693338 -14453370 + AT_rich Low_complexity Low_complexity 1 23 0 1 636 207 273 13 0 chr2R 6693636 6693713 -14452995 + T-rich Low_complexity Low_complexity 1 78 0 1 636 23 54 0 0 chr2R 6696185 6696222 -14450486 + AT_rich Low_complexity Low_complexity 1 37 0 1 636 234 0 0 0 chr2R 6696698 6696724 -14449984 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1 636 222 350 16 8 chr2R 6701287 6701408 -14445300 + (TA)n Simple_repeat Simple_repeat 1 122 0 1 636 216 186 16 33 chr2R 6702811 6702872 -14443836 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1 636 21 71 0 0 chr2R 6703308 6703350 -14443358 + AT_rich Low_complexity Low_complexity 1 42 0 1 636 27 0 0 0 chr2R 6706714 6706741 -14439967 + AT_rich Low_complexity Low_complexity 1 27 0 1 636 186 103 0 0 chr2R 6715202 6715231 -14431477 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 636 232 217 60 12 chr2R 6718764 6718848 -14427860 + (CATA)n Simple_repeat Simple_repeat 3 90 0 1 636 207 88 0 0 chr2R 6720924 6720958 -14425750 + (ATTCG)n Simple_repeat Simple_repeat 2 35 0 1 636 229 146 49 0 chr2R 6721096 6721137 -14425571 + (CCGAA)n Simple_repeat Simple_repeat 2 44 0 1 636 180 0 0 0 chr2R 6721650 6721670 -14425038 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 636 233 217 0 0 chr2R 6723199 6723245 -14423463 + (AACTG)n Simple_repeat Simple_repeat 1 46 0 1 636 276 234 0 0 chr2R 6727510 6727574 -14419134 + (CTG)n Simple_repeat Simple_repeat 1 64 0 1 636 225 176 39 0 chr2R 6733172 6733223 -14413485 + (CACAT)n Simple_repeat Simple_repeat 5 57 0 1 636 24 32 0 0 chr2R 6734990 6735021 -14411687 + AT_rich Low_complexity Low_complexity 1 31 0 1 636 28 48 0 0 chr2R 6735076 6735118 -14411590 + AT_rich Low_complexity Low_complexity 1 42 0 1 636 198 71 0 0 chr2R 6736726 6736754 -14409954 + (CTG)n Simple_repeat Simple_repeat 1 28 0 1 636 25 0 0 0 chr2R 6736800 6736825 -14409883 + AT_rich Low_complexity Low_complexity 1 25 0 1 636 32 57 0 0 chr2R 6736917 6736970 -14409738 + AT_rich Low_complexity Low_complexity 1 53 0 1 636 312 127 0 0 chr2R 6739667 6739722 -14406986 + (TAAAA)n Simple_repeat Simple_repeat 1 55 0 1 636 219 308 13 0 chr2R 6745647 6745725 -14400983 + (ATG)n Simple_repeat Simple_repeat 2 80 0 1 636 24 0 0 0 chr2R 6746114 6746138 -14400570 + AT_rich Low_complexity Low_complexity 1 24 0 1 636 202 243 0 54 chr2R 6746723 6746797 -14399911 + A-rich Low_complexity Low_complexity 3 72 0 1 636 22 70 0 0 chr2R 6747145 6747188 -14399520 + AT_rich Low_complexity Low_complexity 1 43 0 1 636 28 0 0 0 chr2R 6752437 6752465 -14394243 + AT_rich Low_complexity Low_complexity 1 28 0 1 636 34 65 0 0 chr2R 6755970 6756032 -14390676 + AT_rich Low_complexity Low_complexity 1 62 0 1 636 22 0 0 0 chr2R 6757919 6757941 -14388767 + AT_rich Low_complexity Low_complexity 1 22 0 1 636 210 37 0 0 chr2R 6758855 6758882 -14387826 + (CCCGG)n Simple_repeat Simple_repeat 5 31 0 1 636 23 0 0 0 chr2R 6760712 6760735 -14385973 + AT_rich Low_complexity Low_complexity 1 23 0 1 636 22 35 0 0 chr2R 6760951 6760980 -14385728 + AT_rich Low_complexity Low_complexity 1 29 0 1 636 29 28 0 0 chr2R 6761130 6761166 -14385542 + AT_rich Low_complexity Low_complexity 1 36 0 1 636 250 49 0 146 chr2R 6763180 6763228 -14383480 - PROTOP_A DNA P -556 549 509 1 636 268 26 0 152 chr2R 6763188 6763234 -14383474 + PROTOP_A DNA P 507 545 -560 1 636 23 0 0 0 chr2R 6764812 6764835 -14381873 + AT_rich Low_complexity Low_complexity 1 23 0 1 636 22 56 0 0 chr2R 6767275 6767311 -14379397 + AT_rich Low_complexity Low_complexity 1 36 0 1 636 251 140 20 0 chr2R 6772374 6772424 -14374284 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 1 636 24 32 0 0 chr2R 6776459 6776490 -14370218 + AT_rich Low_complexity Low_complexity 1 31 0 1 636 298 273 0 0 chr2R 6778981 6779058 -14367650 + ROO_I LTR Pao 662 738 -7518 1 636 24 32 0 0 chr2R 6780507 6780538 -14366170 + AT_rich Low_complexity Low_complexity 1 31 0 1 636 190 56 56 0 chr2R 6781835 6781871 -14364837 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 636 180 111 0 0 chr2R 6790149 6790176 -14356532 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 636 213 65 0 0 chr2R 6793602 6793633 -14353075 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 636 205 195 0 0 chr2R 6793815 6793856 -14352852 + A-rich Low_complexity Low_complexity 1 41 0 1 636 234 204 0 0 chr2R 6794782 6794826 -14351882 - DNAREP1_DM LINE Penelope -149 445 402 1 636 234 128 0 0 chr2R 6795573 6795612 -14351096 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 1 636 33 43 0 0 chr2R 6796170 6796217 -14350491 + AT_rich Low_complexity Low_complexity 1 47 0 1 636 192 97 0 0 chr2R 6796328 6796359 -14350349 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1 636 192 40 0 0 chr2R 6796768 6796793 -14349915 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 636 198 143 0 0 chr2R 6798622 6798657 -14348051 + (ACTCG)n Simple_repeat Simple_repeat 5 39 0 1 636 24 0 0 0 chr2R 6800071 6800095 -14346613 + AT_rich Low_complexity Low_complexity 1 24 0 1 636 210 240 0 0 chr2R 6803207 6803257 -14343451 + (CTG)n Simple_repeat Simple_repeat 2 51 0 1 636 234 0 0 0 chr2R 6804455 6804481 -14342227 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1 636 232 292 0 0 chr2R 6804607 6804679 -14342029 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 636 234 0 0 0 chr2R 6806453 6806479 -14340229 + (TCC)n Simple_repeat Simple_repeat 2 27 0 1 636 215 212 30 15 chr2R 6806921 6806988 -14339720 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 636 200 200 0 0 chr2R 6807125 6807170 -14339538 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 636 21 0 0 0 chr2R 6808584 6808605 -14338103 + AT_rich Low_complexity Low_complexity 1 21 0 1 636 205 167 0 45 chr2R 6810810 6810854 -14335854 + (CATA)n Simple_repeat Simple_repeat 4 45 0 1 636 243 0 0 0 chr2R 6812995 6813022 -14333686 + (CATATA)n Simple_repeat Simple_repeat 6 32 0 1 636 180 77 0 0 chr2R 6814519 6814545 -14332163 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 637 189 0 0 0 chr2R 6816533 6816554 -14330154 + (CCTAT)n Simple_repeat Simple_repeat 5 25 0 1 637 26 82 0 0 chr2R 6821343 6821404 -14325304 + AT_rich Low_complexity Low_complexity 1 61 0 1 637 212 283 0 0 chr2R 6821977 6822030 -14324678 + C-rich Low_complexity Low_complexity 5 57 0 1 637 216 111 0 0 chr2R 6824368 6824404 -14322304 + (GAGTG)n Simple_repeat Simple_repeat 3 38 0 1 637 189 74 0 0 chr2R 6825934 6825961 -14320747 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 637 793 170 77 97 chr2R 6827303 6827498 -14319210 - DNAREP1_DM LINE Penelope 0 594 404 1 637 500 126 33 33 chr2R 6827618 6827708 -14319000 - DNAREP1_DM LINE Penelope -503 91 2 1 637 21 0 0 0 chr2R 6829385 6829406 -14317302 + AT_rich Low_complexity Low_complexity 1 21 0 1 637 243 243 0 13 chr2R 6830230 6830305 -14316403 + (TG)n Simple_repeat Simple_repeat 1 74 0 1 637 180 0 0 0 chr2R 6831115 6831135 -14315573 + (CAG)n Simple_repeat Simple_repeat 2 21 0 1 637 21 0 0 0 chr2R 6833435 6833456 -14313252 + AT_rich Low_complexity Low_complexity 1 21 0 1 637 23 0 0 0 chr2R 6834646 6834669 -14312039 + AT_rich Low_complexity Low_complexity 1 23 0 1 637 4605 4 0 0 chr2R 6835589 6836096 -14310612 + DM176_LTR LTR Gypsy 1 507 0 1 637 56999 1 2 10 chr2R 6836096 6842571 -14304137 + DM176_I LTR Gypsy 1 6420 0 1 637 4605 4 0 0 chr2R 6842571 6843078 -14303630 + DM176_LTR LTR Gypsy 1 507 0 1 637 357 117 0 0 chr2R 6847457 6847517 -14299191 + (CAG)n Simple_repeat Simple_repeat 3 62 0 1 637 205 171 0 0 chr2R 6849395 6849436 -14297272 + (CAGC)n Simple_repeat Simple_repeat 2 42 0 1 637 225 65 0 0 chr2R 6849607 6849638 -14297070 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 637 269 68 0 22 chr2R 6851103 6851148 -14295560 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 637 184 114 0 64 chr2R 6852955 6853002 -14293706 + (CATTC)n Simple_repeat Simple_repeat 3 46 0 1 637 260 200 0 14 chr2R 6853276 6853347 -14293361 + (AACTG)n Simple_repeat Simple_repeat 4 73 0 1 637 275 71 24 0 chr2R 6855721 6855763 -14290945 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 637 210 71 0 0 chr2R 6864231 6864259 -14282449 + (CAG)n Simple_repeat Simple_repeat 2 29 0 1 637 198 150 0 0 chr2R 6864531 6864571 -14282137 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 637 183 42 0 0 chr2R 6864601 6864625 -14282083 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 637 25 0 0 0 chr2R 6865122 6865147 -14281561 + AT_rich Low_complexity Low_complexity 1 25 0 1 637 188 169 0 44 chr2R 6865400 6865468 -14281240 + T-rich Low_complexity Low_complexity 1 65 0 1 637 261 0 0 0 chr2R 6865861 6865890 -14280818 + (TAA)n Simple_repeat Simple_repeat 3 31 0 1 637 3567 5 10 7 chr2R 6867213 6867626 -14279082 + DM297_LTR LTR Gypsy 1 414 0 1 637 183 156 0 0 chr2R 6868320 6868352 -14278356 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 1 637 213 39 0 0 chr2R 6868491 6868517 -14278191 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 637 233 135 19 0 chr2R 6869076 6869128 -14277580 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 637 26 0 0 0 chr2R 6869472 6869498 -14277210 + AT_rich Low_complexity Low_complexity 1 26 0 1 637 26 50 0 0 chr2R 6869998 6870038 -14276670 + AT_rich Low_complexity Low_complexity 1 40 0 1 637 228 242 0 0 chr2R 6870180 6870242 -14276466 + T-rich Low_complexity Low_complexity 1 62 0 1 637 189 35 32 95 chr2R 6871084 6871147 -14275561 + (TTATA)n Simple_repeat Simple_repeat 5 63 0 1 637 256 279 0 0 chr2R 6871756 6871824 -14274884 + (CAGAGA)n Simple_repeat Simple_repeat 1 68 0 1 637 249 33 0 0 chr2R 6872209 6872239 -14274469 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 637 37 23 0 0 chr2R 6872641 6872685 -14274023 + AT_rich Low_complexity Low_complexity 1 44 0 1 637 226 154 0 71 chr2R 6873274 6873330 -14273378 + (CGAAA)n Simple_repeat Simple_repeat 1 52 0 1 637 219 69 0 0 chr2R 6876560 6876589 -14270119 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 637 322 134 37 0 chr2R 6877387 6877469 -14269239 - ROO_I LTR Pao -7521 735 651 1 637 495 123 0 0 chr2R 6877618 6877699 -14269009 + (CTG)n Simple_repeat Simple_repeat 2 82 0 1 637 180 0 0 0 chr2R 6877770 6877790 -14268918 + (CTG)n Simple_repeat Simple_repeat 3 22 0 1 637 432 55 0 0 chr2R 6877872 6877927 -14268781 + (CTG)n Simple_repeat Simple_repeat 1 55 0 1 637 311 230 0 0 chr2R 6878178 6878265 -14268443 - ROO_I LTR Pao -7533 723 637 1 637 269 89 22 0 chr2R 6882231 6882276 -14264432 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 637 180 77 0 0 chr2R 6883707 6883733 -14262975 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 637 270 56 0 0 chr2R 6883827 6883863 -14262845 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 637 216 0 0 0 chr2R 6884221 6884245 -14262463 + (CCCTG)n Simple_repeat Simple_repeat 5 28 0 1 637 210 71 0 0 chr2R 6885341 6885369 -14261339 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 637 198 0 0 0 chr2R 6886280 6886302 -14260406 + (TTCTCC)n Simple_repeat Simple_repeat 1 22 0 1 637 217 185 15 44 chr2R 6888828 6888896 -14257812 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 637 273 128 0 0 chr2R 6889048 6889095 -14257613 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 637 243 0 0 0 chr2R 6890485 6890512 -14256196 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 637 231 36 0 0 chr2R 6893061 6893089 -14253619 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 637 198 103 0 0 chr2R 6893231 6893260 -14253448 + (CAGA)n Simple_repeat Simple_repeat 3 31 0 1 637 282 29 0 0 chr2R 6893335 6893370 -14253338 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 637 318 106 0 0 chr2R 6895662 6895709 -14250999 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 637 29 47 0 0 chr2R 6895792 6895835 -14250873 + AT_rich Low_complexity Low_complexity 1 43 0 1 637 3976 5 0 0 chr2R 6897374 6897802 -14248906 - ROO_LTR LTR Pao 0 428 1 1 637 74923 1 0 1 chr2R 6897802 6906062 -14240646 - ROO_I LTR Pao 0 8256 1 1 637 3976 5 0 0 chr2R 6906062 6906490 -14240218 - ROO_LTR LTR Pao 0 428 1 1 637 46248 6 0 0 chr2R 6907458 6912443 -14234265 - LINEJ1_DM LINE Jockey 0 5020 36 1 637 224 200 15 0 chr2R 6912869 6912934 -14233774 + (CACCAT)n Simple_repeat Simple_repeat 3 68 0 1 637 258 32 0 0 chr2R 6914729 6914760 -14231948 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 637 266 73 0 24 chr2R 6917927 6917969 -14228739 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 637 26 0 0 0 chr2R 6917986 6918012 -14228696 + AT_rich Low_complexity Low_complexity 1 26 0 1 637 228 35 0 0 chr2R 6918762 6918791 -14227917 + (CCTG)n Simple_repeat Simple_repeat 3 31 0 1 637 23 54 0 0 chr2R 6919620 6919657 -14227051 + AT_rich Low_complexity Low_complexity 1 37 0 1 637 278 211 10 21 chr2R 6921510 6921607 -14225101 + ROO_I LTR Pao 639 734 -7522 1 637 204 67 0 0 chr2R 6921711 6921741 -14224967 + (CGATG)n Simple_repeat Simple_repeat 1 30 0 1 637 245 29 29 0 chr2R 6921929 6921963 -14224745 + (ACTG)n Simple_repeat Simple_repeat 4 38 0 1 637 22 80 0 0 chr2R 6923100 6923150 -14223558 + AT_rich Low_complexity Low_complexity 1 50 0 1 637 211 206 0 73 chr2R 6923312 6923380 -14223328 + A-rich Low_complexity Low_complexity 4 66 0 1 637 201 74 0 0 chr2R 6926305 6926332 -14220376 + (T)n Simple_repeat Simple_repeat 1 27 0 1 637 243 61 0 0 chr2R 6927676 6927709 -14218999 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 637 219 152 0 0 chr2R 6927897 6927943 -14218765 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 637 236 246 16 0 chr2R 6928092 6928153 -14218555 + (CAG)n Simple_repeat Simple_repeat 2 63 0 1 637 210 37 0 0 chr2R 6929504 6929531 -14217177 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 637 28 0 0 0 chr2R 6931081 6931109 -14215599 + AT_rich Low_complexity Low_complexity 1 28 0 1 637 194 0 39 0 chr2R 6931693 6931719 -14214989 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 637 246 62 0 0 chr2R 6934907 6934939 -14211769 + (CAGT)n Simple_repeat Simple_repeat 1 32 0 1 637 324 120 0 0 chr2R 6935250 6935300 -14211408 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 637 216 97 0 0 chr2R 6937675 6937706 -14209002 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1 637 222 37 0 0 chr2R 6940747 6940774 -14205934 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 637 198 150 0 0 chr2R 6941140 6941180 -14205528 + (CGAAA)n Simple_repeat Simple_repeat 3 42 0 1 637 25 75 0 0 chr2R 6941955 6942008 -14204700 + AT_rich Low_complexity Low_complexity 1 53 0 1 637 26 30 0 0 chr2R 6944201 6944234 -14202474 + AT_rich Low_complexity Low_complexity 1 33 0 1 637 212 155 17 33 chr2R 6944297 6944357 -14202351 + (TGGG)n Simple_repeat Simple_repeat 3 61 0 1 637 231 330 11 0 chr2R 6945822 6945916 -14200792 + (CA)n Simple_repeat Simple_repeat 2 96 0 1 637 207 0 0 0 chr2R 6946767 6946790 -14199918 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 1 638 216 196 0 0 chr2R 6950196 6950242 -14196466 + A-rich Low_complexity Low_complexity 1 46 0 1 638 214 237 31 31 chr2R 6953192 6953288 -14193420 + A-rich Low_complexity Low_complexity 6 101 0 1 638 204 231 0 0 chr2R 6953435 6953474 -14193234 + (TTG)n Simple_repeat Simple_repeat 2 40 0 1 638 288 137 0 0 chr2R 6954648 6954699 -14192009 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 638 207 114 0 0 chr2R 6955107 6955142 -14191566 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1 638 252 0 0 0 chr2R 6957968 6957996 -14188712 + (CTG)n Simple_repeat Simple_repeat 1 28 0 1 638 324 191 71 0 chr2R 6958037 6958121 -14188587 + ROO_I LTR Pao 643 732 -7524 1 638 279 79 0 0 chr2R 6958240 6958278 -14188430 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1 638 215 215 15 0 chr2R 6958440 6958505 -14188203 + (CTG)n Simple_repeat Simple_repeat 3 68 0 1 638 258 32 0 0 chr2R 6959493 6959524 -14187184 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 638 297 68 0 0 chr2R 6960496 6960540 -14186168 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 638 195 69 0 0 chr2R 6960671 6960700 -14186008 + (CAG)n Simple_repeat Simple_repeat 3 31 0 1 638 198 118 0 0 chr2R 6961004 6961038 -14185670 + (T)n Simple_repeat Simple_repeat 1 34 0 1 638 249 139 0 0 chr2R 6961942 6961985 -14184723 + (CAG)n Simple_repeat Simple_repeat 2 44 0 1 638 375 89 0 0 chr2R 6964118 6964174 -14182534 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 1 638 378 115 0 0 chr2R 6964473 6964534 -14182174 + (CTG)n Simple_repeat Simple_repeat 3 63 0 1 638 23 0 0 0 chr2R 6967745 6967768 -14178940 + AT_rich Low_complexity Low_complexity 1 23 0 1 638 341 102 0 17 chr2R 6968159 6968219 -14178489 + (CAGC)n Simple_repeat Simple_repeat 3 61 0 1 638 456 51 0 0 chr2R 6968606 6968665 -14178043 + (CAG)n Simple_repeat Simple_repeat 3 61 0 1 638 215 281 24 12 chr2R 6969745 6969828 -14176880 + A-rich Low_complexity Low_complexity 6 89 0 1 638 217 257 0 68 chr2R 6969921 6970038 -14176670 + A-rich Low_complexity Low_complexity 2 110 0 1 638 225 94 0 0 chr2R 6971796 6971828 -14174880 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 638 201 39 0 0 chr2R 6971907 6971933 -14174775 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 638 198 71 0 0 chr2R 6972185 6972213 -14174495 + (CAT)n Simple_repeat Simple_repeat 1 28 0 1 638 180 0 0 0 chr2R 6978175 6978195 -14168513 + (TAG)n Simple_repeat Simple_repeat 1 20 0 1 638 204 122 0 0 chr2R 6979273 6979314 -14167394 + (A)n Simple_repeat Simple_repeat 1 41 0 1 638 320 0 25 0 chr2R 6980146 6980186 -14166522 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 638 183 129 0 0 chr2R 6983277 6983308 -14163400 + (CATA)n Simple_repeat Simple_repeat 4 34 0 1 638 205 184 0 0 chr2R 6984029 6984067 -14162641 + (ACTG)n Simple_repeat Simple_repeat 4 41 0 1 638 194 62 0 30 chr2R 6984076 6984109 -14162599 + (CATAA)n Simple_repeat Simple_repeat 1 32 0 1 638 24 32 0 0 chr2R 6985703 6985734 -14160974 + AT_rich Low_complexity Low_complexity 1 31 0 1 638 204 125 0 0 chr2R 6986226 6986258 -14160450 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 1 638 195 114 0 0 chr2R 6987000 6987035 -14159673 + (CAATT)n Simple_repeat Simple_repeat 3 37 0 1 638 214 280 0 0 chr2R 6987955 6988005 -14158703 + (CATATA)n Simple_repeat Simple_repeat 6 55 0 1 638 280 111 0 31 chr2R 6988991 6989056 -14157652 + (TTCTG)n Simple_repeat Simple_repeat 3 65 0 1 638 237 65 0 0 chr2R 6989772 6989803 -14156905 + (CAG)n Simple_repeat Simple_repeat 2 32 0 1 638 200 143 0 28 chr2R 6990148 6990184 -14156524 + (TTG)n Simple_repeat Simple_repeat 1 35 0 1 638 205 75 0 48 chr2R 6990787 6990829 -14155879 + (CATAG)n Simple_repeat Simple_repeat 2 41 0 1 638 21 71 0 0 chr2R 6992848 6992890 -14153818 + AT_rich Low_complexity Low_complexity 1 42 0 1 638 30 27 0 0 chr2R 6992957 6992994 -14153714 + AT_rich Low_complexity Low_complexity 1 37 0 1 638 318 106 0 0 chr2R 6993421 6993468 -14153240 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 638 224 59 0 29 chr2R 6993701 6993736 -14152972 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1 638 25 0 0 0 chr2R 6995201 6995226 -14151482 + AT_rich Low_complexity Low_complexity 1 25 0 1 638 38 39 0 0 chr2R 6995732 6995784 -14150924 + AT_rich Low_complexity Low_complexity 1 52 0 1 638 30 45 0 0 chr2R 6996012 6996056 -14150652 + AT_rich Low_complexity Low_complexity 1 44 0 1 638 25 0 0 0 chr2R 6997920 6997945 -14148763 + AT_rich Low_complexity Low_complexity 1 25 0 1 638 198 0 0 0 chr2R 6998708 6998730 -14147978 + (C)n Simple_repeat Simple_repeat 1 22 0 1 638 30 27 0 0 chr2R 7000272 7000309 -14146399 + AT_rich Low_complexity Low_complexity 1 37 0 1 638 24 0 0 0 chr2R 7000781 7000805 -14145903 + AT_rich Low_complexity Low_complexity 1 24 0 1 638 210 259 0 18 chr2R 7002099 7002154 -14144554 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 638 375 23 0 0 chr2R 7002814 7002858 -14143850 + (CAGC)n Simple_repeat Simple_repeat 3 46 0 1 638 258 136 0 0 chr2R 7003774 7003818 -14142890 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 638 195 167 0 0 chr2R 7006049 7006091 -14140617 + (CAACC)n Simple_repeat Simple_repeat 1 42 0 1 638 203 179 0 0 chr2R 7006314 7006353 -14140355 + A-rich Low_complexity Low_complexity 1 39 0 1 638 210 250 27 14 chr2R 7007099 7007172 -14139536 + (CTG)n Simple_repeat Simple_repeat 2 75 0 1 638 35 24 0 0 chr2R 7009721 7009763 -14136945 + AT_rich Low_complexity Low_complexity 1 42 0 1 638 32 0 0 0 chr2R 7009862 7009894 -14136814 + AT_rich Low_complexity Low_complexity 1 32 0 1 638 35 24 0 0 chr2R 7013487 7013529 -14133179 + AT_rich Low_complexity Low_complexity 1 42 0 1 638 32 0 0 0 chr2R 7013628 7013660 -14133048 + AT_rich Low_complexity Low_complexity 1 32 0 1 638 242 116 23 0 chr2R 7016279 7016322 -14130386 + (TATG)n Simple_repeat Simple_repeat 1 44 0 1 638 207 0 0 0 chr2R 7017966 7017989 -14128719 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1 638 198 0 0 0 chr2R 7019168 7019190 -14127518 + (TGG)n Simple_repeat Simple_repeat 1 22 0 1 638 218 140 68 34 chr2R 7021528 7021587 -14125121 + (CAATA)n Simple_repeat Simple_repeat 3 63 0 1 638 22 70 0 0 chr2R 7021626 7021669 -14125039 + AT_rich Low_complexity Low_complexity 1 43 0 1 638 1606 0 0 0 chr2R 7021669 7021855 -14124853 + POGON1 DNA Pogo 1 186 0 1 638 33 25 0 0 chr2R 7022168 7022208 -14124500 + AT_rich Low_complexity Low_complexity 1 40 0 1 638 27 0 0 0 chr2R 7022329 7022356 -14124352 + AT_rich Low_complexity Low_complexity 1 27 0 1 638 330 185 0 16 chr2R 7025486 7025561 -14121147 + DNAREP1_DM LINE Penelope 434 495 -99 1 638 21 36 0 0 chr2R 7028860 7028888 -14117820 + AT_rich Low_complexity Low_complexity 1 28 0 1 638 268 250 0 14 chr2R 7028920 7028993 -14117715 + DNAREP1_DM LINE Penelope 8 79 -515 1 638 25 65 0 0 chr2R 7030528 7030574 -14116134 + AT_rich Low_complexity Low_complexity 1 46 0 1 638 25 31 0 0 chr2R 7031050 7031082 -14115626 + AT_rich Low_complexity Low_complexity 1 32 0 1 638 237 180 0 76 chr2R 7031089 7031155 -14115553 - DNAREP1_DM LINE Penelope -146 448 388 1 638 213 94 0 0 chr2R 7032659 7032691 -14114017 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 638 210 255 0 0 chr2R 7033552 7033599 -14113109 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1 638 227 351 6 6 chr2R 7036600 7036772 -14109936 + (TCG)n Simple_repeat Simple_repeat 3 174 0 1 638 206 174 22 0 chr2R 7037017 7037063 -14109645 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 638 182 118 29 0 chr2R 7039048 7039082 -14107626 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 638 21 57 0 0 chr2R 7040545 7040580 -14106128 + AT_rich Low_complexity Low_complexity 1 35 0 1 638 22 35 0 0 chr2R 7041252 7041281 -14105427 + AT_rich Low_complexity Low_complexity 1 29 0 1 638 49 43 0 0 chr2R 7041773 7041843 -14104865 + AT_rich Low_complexity Low_complexity 1 70 0 1 638 364 308 0 0 chr2R 7043569 7043699 -14103009 - DNAREP1_DM LINE Penelope -464 130 1 1 638 29 0 0 0 chr2R 7044537 7044566 -14102142 + AT_rich Low_complexity Low_complexity 1 29 0 1 638 25 0 0 0 chr2R 7045311 7045336 -14101372 + AT_rich Low_complexity Low_complexity 1 25 0 1 638 453 226 156 17 chr2R 7045378 7045558 -14101150 + DNAREP1_DM LINE Penelope 229 433 -161 1 638 21 0 0 0 chr2R 7046253 7046274 -14100434 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 306 0 0 0 chr2R 7049989 7050023 -14096685 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1 638 189 0 0 0 chr2R 7052219 7052240 -14094468 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 638 225 0 0 0 chr2R 7052431 7052456 -14094252 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 638 231 128 0 25 chr2R 7053404 7053444 -14093264 + DNAREP1_DM LINE Penelope 19 57 -537 1 638 207 0 0 0 chr2R 7056014 7056037 -14090671 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 638 243 61 0 0 chr2R 7058494 7058527 -14088181 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 638 21 0 0 0 chr2R 7060745 7060766 -14085942 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 264 137 0 0 chr2R 7061952 7062003 -14084705 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 638 203 152 0 21 chr2R 7062851 7062898 -14083810 + GA-rich Low_complexity Low_complexity 2 47 0 1 638 186 103 0 0 chr2R 7063064 7063093 -14083615 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 1 638 203 290 10 51 chr2R 7063145 7063243 -14083465 + GA-rich Low_complexity Low_complexity 2 95 0 1 638 26 64 0 0 chr2R 7063858 7063905 -14082803 + AT_rich Low_complexity Low_complexity 1 47 0 1 638 216 67 0 0 chr2R 7065655 7065685 -14081023 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 638 261 284 8 25 chr2R 7068280 7068399 -14078309 + A-rich Low_complexity Low_complexity 1 117 0 1 638 204 40 0 0 chr2R 7068477 7068502 -14078206 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1 638 183 152 0 0 chr2R 7069342 7069388 -14077320 + (TGG)n Simple_repeat Simple_repeat 2 47 0 1 638 204 194 0 0 chr2R 7071540 7071576 -14075132 + G-rich Low_complexity Low_complexity 1 36 0 1 638 183 80 0 0 chr2R 7071791 7071816 -14074892 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 638 24 0 0 0 chr2R 7072095 7072119 -14074589 + AT_rich Low_complexity Low_complexity 1 24 0 1 638 337 53 18 18 chr2R 7072214 7072271 -14074437 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 638 261 153 0 40 chr2R 7073134 7073209 -14073499 + (CAA)n Simple_repeat Simple_repeat 2 73 0 1 638 204 135 0 0 chr2R 7074000 7074037 -14072671 + (CATATA)n Simple_repeat Simple_repeat 5 41 0 1 638 235 240 0 0 chr2R 7074858 7074908 -14071800 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 1 638 210 255 0 18 chr2R 7075310 7075366 -14071342 + (TATG)n Simple_repeat Simple_repeat 4 58 0 1 638 183 100 0 0 chr2R 7075834 7075864 -14070844 + (CATCG)n Simple_repeat Simple_repeat 2 31 0 1 638 183 156 0 0 chr2R 7076005 7076037 -14070671 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 639 255 61 0 0 chr2R 7080561 7080594 -14066114 + (CCA)n Simple_repeat Simple_repeat 1 33 0 1 639 25 65 0 0 chr2R 7080908 7080954 -14065754 + AT_rich Low_complexity Low_complexity 1 46 0 1 639 192 77 0 0 chr2R 7082063 7082089 -14064619 + (CGA)n Simple_repeat Simple_repeat 1 26 0 1 639 251 301 10 10 chr2R 7082325 7082429 -14064279 + (TATG)n Simple_repeat Simple_repeat 4 107 0 1 639 180 0 0 0 chr2R 7083666 7083686 -14063022 + (TATG)n Simple_repeat Simple_repeat 1 20 0 1 639 217 290 0 16 chr2R 7086717 7086780 -14059928 + (CAG)n Simple_repeat Simple_repeat 1 62 0 1 639 291 71 0 0 chr2R 7087482 7087524 -14059184 + (CGAAT)n Simple_repeat Simple_repeat 5 46 0 1 639 212 122 24 0 chr2R 7087689 7087730 -14058978 + (GAAAA)n Simple_repeat Simple_repeat 3 44 0 1 639 24 0 0 0 chr2R 7089393 7089417 -14057291 + AT_rich Low_complexity Low_complexity 1 24 0 1 639 218 157 19 19 chr2R 7090123 7090175 -14056533 + GA-rich Low_complexity Low_complexity 2 53 0 1 639 195 139 0 0 chr2R 7091254 7091290 -14055418 + (TTTCG)n Simple_repeat Simple_repeat 5 40 0 1 639 204 158 26 0 chr2R 7092057 7092095 -14054613 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 639 221 241 0 0 chr2R 7092582 7092640 -14054068 + (ACTG)n Simple_repeat Simple_repeat 4 61 0 1 639 198 128 0 0 chr2R 7094286 7094325 -14052383 + (T)n Simple_repeat Simple_repeat 1 39 0 1 639 1055 23 0 0 chr2R 7095381 7095509 -14051199 - BS LINE Jockey 0 5126 4999 1 639 351 136 0 0 chr2R 7095887 7095946 -14050762 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 639 287 174 0 115 chr2R 7096049 7096061 -14050647 + ROO_I LTR Pao 641 732 -7524 1 639 290 228 65 0 chr2R 7096061 7096153 -14050555 + BS LINE Jockey 2017 2114 -3012 1 639 270 216 0 0 chr2R 7096241 7096315 -14050393 + (CAA)n Simple_repeat Simple_repeat 3 76 0 1 639 204 40 0 0 chr2R 7096767 7096792 -14049916 + (CAG)n Simple_repeat Simple_repeat 3 27 0 1 639 215 239 0 0 chr2R 7096932 7096978 -14049730 + (CAA)n Simple_repeat Simple_repeat 1 46 0 1 639 248 205 0 49 chr2R 7097687 7097769 -14048939 + ROO_I LTR Pao 642 719 -7537 1 639 198 103 0 0 chr2R 7098044 7098073 -14048635 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 639 251 208 13 13 chr2R 7098635 7098713 -14047995 + ROO_I LTR Pao 647 724 -7532 1 639 213 240 0 0 chr2R 7104733 7104783 -14041925 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 639 220 191 44 0 chr2R 7104836 7104904 -14041804 + A-rich Low_complexity Low_complexity 2 72 0 1 639 30 27 0 0 chr2R 7106040 7106077 -14040631 + AT_rich Low_complexity Low_complexity 1 37 0 1 639 245 207 17 0 chr2R 7116222 7116280 -14030428 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 639 23 0 0 0 chr2R 7127053 7127076 -14019632 + AT_rich Low_complexity Low_complexity 1 23 0 1 639 22 0 0 0 chr2R 7128214 7128236 -14018472 + AT_rich Low_complexity Low_complexity 1 22 0 1 639 260 351 0 0 chr2R 7129387 7129518 -14017190 + (CCG)n Simple_repeat Simple_repeat 2 132 0 1 639 22 0 0 0 chr2R 7129921 7129943 -14016765 + AT_rich Low_complexity Low_complexity 1 22 0 1 639 24 91 0 0 chr2R 7132634 7132700 -14014008 + AT_rich Low_complexity Low_complexity 1 66 0 1 639 23 54 0 0 chr2R 7134207 7134244 -14012464 + AT_rich Low_complexity Low_complexity 1 37 0 1 639 451 170 129 35 chr2R 7134698 7134814 -14011894 - DNAREP1_DM LINE Penelope 0 594 468 1 639 302 197 0 0 chr2R 7134895 7134956 -14011752 - DNAREP1_DM LINE Penelope -533 61 1 1 639 308 301 0 0 chr2R 7135858 7135991 -14010717 + G-rich Low_complexity Low_complexity 3 135 0 1 639 207 0 0 0 chr2R 7139497 7139520 -14007188 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 639 21 0 0 0 chr2R 7139956 7139977 -14006731 + AT_rich Low_complexity Low_complexity 1 21 0 1 639 228 35 0 0 chr2R 7147896 7147925 -13998783 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1 639 31 44 0 42 chr2R 7148462 7148533 -13998175 + AT_rich Low_complexity Low_complexity 1 68 0 1 639 21 36 0 0 chr2R 7148604 7148632 -13998076 + AT_rich Low_complexity Low_complexity 1 28 0 1 639 28 48 0 0 chr2R 7151414 7151456 -13995252 + AT_rich Low_complexity Low_complexity 1 42 0 1 639 225 125 103 59 chr2R 7153878 7153946 -13992762 + ROO_I LTR Pao 655 725 -7531 1 639 438 136 0 0 chr2R 7154092 7154173 -13992535 + (CAG)n Simple_repeat Simple_repeat 1 81 0 1 639 33 25 0 0 chr2R 7155369 7155409 -13991299 + AT_rich Low_complexity Low_complexity 1 40 0 1 639 248 297 0 0 chr2R 7155962 7156036 -13990672 + (CCG)n Simple_repeat Simple_repeat 2 75 0 1 639 277 288 0 0 chr2R 7156324 7156404 -13990304 + (CCG)n Simple_repeat Simple_repeat 2 81 0 1 639 232 288 0 0 chr2R 7156874 7156992 -13989716 + CT-rich Low_complexity Low_complexity 3 120 0 1 639 263 314 0 22 chr2R 7157518 7157655 -13989053 + (CCG)n Simple_repeat Simple_repeat 2 135 0 1 639 28 29 0 0 chr2R 7161651 7161686 -13985022 + AT_rich Low_complexity Low_complexity 1 35 0 1 639 192 125 0 0 chr2R 7163077 7163109 -13983599 + (CCA)n Simple_repeat Simple_repeat 1 32 0 1 639 22 0 0 0 chr2R 7163947 7163969 -13982739 + AT_rich Low_complexity Low_complexity 1 22 0 1 639 22 0 0 0 chr2R 7173684 7173706 -13973002 + AT_rich Low_complexity Low_complexity 1 22 0 1 639 21 0 0 0 chr2R 7174832 7174853 -13971855 + AT_rich Low_complexity Low_complexity 1 21 0 1 639 24 0 0 0 chr2R 7181003 7181027 -13965681 + AT_rich Low_complexity Low_complexity 1 24 0 1 639 21 82 0 0 chr2R 7181068 7181117 -13965591 + AT_rich Low_complexity Low_complexity 1 49 0 1 639 2316 11 7 11 chr2R 7185177 7185453 -13961255 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 639 22290 1 1 0 chr2R 7185453 7187849 -13958859 - BLASTOPIA_I LTR Gypsy 0 4481 2083 1 639 12075 3 1 0 chr2R 7187834 7189165 -13957543 - BLASTOPIA_I LTR Gypsy -3149 1332 1 1 639 2316 11 7 11 chr2R 7189165 7189441 -13957267 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 639 228 213 0 0 chr2R 7189894 7189941 -13956767 + (CTG)n Simple_repeat Simple_repeat 3 49 0 1 639 248 122 105 26 chr2R 7196304 7196380 -13950328 + ROO_I LTR Pao 641 722 -7534 1 639 251 253 0 75 chr2R 7196692 7196786 -13949922 + ROO_I LTR Pao 643 729 -7527 1 639 30 0 0 0 chr2R 7206648 7206678 -13940030 + AT_rich Low_complexity Low_complexity 1 30 0 1 640 239 195 0 24 chr2R 7209856 7209940 -13936768 + (CATCC)n Simple_repeat Simple_repeat 5 86 0 1 640 27 73 0 0 chr2R 7212499 7212554 -13934154 + AT_rich Low_complexity Low_complexity 1 55 0 1 640 22 0 0 0 chr2R 7214168 7214190 -13932518 + AT_rich Low_complexity Low_complexity 1 22 0 1 640 198 0 0 0 chr2R 7216076 7216098 -13930610 + (A)n Simple_repeat Simple_repeat 1 22 0 1 640 207 69 0 0 chr2R 7216279 7216308 -13930400 + (CAG)n Simple_repeat Simple_repeat 3 31 0 1 640 203 231 0 0 chr2R 7217479 7217518 -13929190 + (CCCGG)n Simple_repeat Simple_repeat 4 42 0 1 640 201 352 0 0 chr2R 7218380 7218434 -13928274 + (TTGGGG)n Simple_repeat Simple_repeat 3 56 0 1 640 27 0 0 0 chr2R 7223927 7223954 -13922754 + AT_rich Low_complexity Low_complexity 1 27 0 1 640 1022 119 193 0 chr2R 7235094 7235296 -13911412 - DNAREP1_DM LINE Penelope 0 594 354 1 640 635 136 16 8 chr2R 7235325 7235451 -13911257 - DNAREP1_DM LINE Penelope -303 291 165 1 640 823 17 0 87 chr2R 7235456 7235651 -13911057 + (TTCA)n Simple_repeat Simple_repeat 3 180 0 1 640 788 3 102 0 chr2R 7235656 7235980 -13910728 + (CATTT)n Simple_repeat Simple_repeat 1 356 0 1 640 839 6 0 96 chr2R 7235992 7236191 -13910517 + (TTCA)n Simple_repeat Simple_repeat 1 180 0 1 640 619 133 19 19 chr2R 7236207 7236314 -13910394 - DNAREP1_DM LINE Penelope -486 108 2 1 640 1001 188 164 159 chr2R 7239377 7239500 -13907208 + DNAREP1_DM LINE Penelope 2 115 -479 1 640 839 6 0 96 chr2R 7239500 7239699 -13907009 + (TGAA)n Simple_repeat Simple_repeat 1 180 0 1 640 1001 188 164 159 chr2R 7239699 7239810 -13906898 + DNAREP1_DM LINE Penelope 116 250 -344 1 640 794 5 96 0 chr2R 7239810 7240009 -13906699 + (AAATG)n Simple_repeat Simple_repeat 1 218 0 1 640 1001 188 164 159 chr2R 7240009 7240024 -13906684 + DNAREP1_DM LINE Penelope 251 263 -331 1 640 863 13 0 86 chr2R 7240024 7240280 -13906428 + (TGAA)n Simple_repeat Simple_repeat 1 233 0 1 640 1001 188 164 159 chr2R 7240280 7240616 -13906092 + DNAREP1_DM LINE Penelope 264 591 -3 1 640 21 0 0 0 chr2R 7242117 7242138 -13904570 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 180 184 0 0 chr2R 7247452 7247501 -13899207 + (CTG)n Simple_repeat Simple_repeat 3 51 0 1 640 235 157 96 19 chr2R 7250962 7251014 -13895694 + DOC2_DM LINE Jockey 2756 2811 -1982 1 640 186 43 0 0 chr2R 7251372 7251395 -13895313 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 640 327 299 15 23 chr2R 7251696 7251826 -13894882 + (TATATG)n Simple_repeat Simple_repeat 5 133 0 1 640 206 214 0 35 chr2R 7251877 7251935 -13894773 + (CAA)n Simple_repeat Simple_repeat 1 56 0 1 640 180 217 0 0 chr2R 7252300 7252346 -13894362 + (CTG)n Simple_repeat Simple_repeat 2 47 0 1 640 267 133 0 0 chr2R 7252372 7252417 -13894291 + (ATG)n Simple_repeat Simple_repeat 3 47 0 1 640 227 306 0 0 chr2R 7252621 7252683 -13894025 + GA-rich Low_complexity Low_complexity 5 66 0 1 640 213 213 43 0 chr2R 7253693 7253740 -13892968 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 1 640 218 176 0 19 chr2R 7253979 7254031 -13892677 + (TTG)n Simple_repeat Simple_repeat 1 51 0 1 640 214 269 0 0 chr2R 7254039 7254091 -13892617 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 640 207 254 0 33 chr2R 7254101 7254162 -13892546 + (CGGGG)n Simple_repeat Simple_repeat 1 59 0 1 640 214 200 22 0 chr2R 7254734 7254779 -13891929 + (TATATG)n Simple_repeat Simple_repeat 5 50 0 1 640 213 190 35 0 chr2R 7255157 7255215 -13891493 + (TTA)n Simple_repeat Simple_repeat 2 61 0 1 640 214 182 30 15 chr2R 7259160 7259227 -13887481 + (TTAAA)n Simple_repeat Simple_repeat 1 68 0 1 640 297 0 0 0 chr2R 7268633 7268666 -13878042 + (ACCG)n Simple_repeat Simple_repeat 3 35 0 1 640 185 0 40 0 chr2R 7269125 7269150 -13877558 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1 640 22 0 0 0 chr2R 7269894 7269916 -13876792 + AT_rich Low_complexity Low_complexity 1 22 0 1 640 198 0 0 0 chr2R 7272662 7272684 -13874024 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1 640 255 61 0 0 chr2R 7273552 7273585 -13873123 + (CTG)n Simple_repeat Simple_repeat 3 35 0 1 640 29 0 0 0 chr2R 7276865 7276894 -13869814 + AT_rich Low_complexity Low_complexity 1 29 0 1 640 22 0 0 0 chr2R 7277508 7277530 -13869178 + AT_rich Low_complexity Low_complexity 1 22 0 1 640 26 30 0 0 chr2R 7288881 7288914 -13857794 + AT_rich Low_complexity Low_complexity 1 33 0 1 640 358 254 0 55 chr2R 7289587 7289733 -13856975 + DNAREP1_DM LINE Penelope 18 155 -439 1 640 21 36 0 0 chr2R 7292293 7292321 -13854387 + AT_rich Low_complexity Low_complexity 1 28 0 1 640 22 0 0 0 chr2R 7293534 7293556 -13853152 + AT_rich Low_complexity Low_complexity 1 22 0 1 640 24 0 0 0 chr2R 7294561 7294585 -13852123 + AT_rich Low_complexity Low_complexity 1 24 0 1 640 21 0 0 0 chr2R 7295537 7295558 -13851150 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 307 329 0 0 chr2R 7296533 7296694 -13850014 + (TTG)n Simple_repeat Simple_repeat 1 161 0 1 640 277 291 0 0 chr2R 7297700 7297817 -13848891 + (TTG)n Simple_repeat Simple_repeat 3 119 0 1 640 22 0 0 0 chr2R 7298573 7298595 -13848113 + AT_rich Low_complexity Low_complexity 1 22 0 1 640 23 78 0 0 chr2R 7298648 7298699 -13848009 + AT_rich Low_complexity Low_complexity 1 51 0 1 640 237 119 0 0 chr2R 7300934 7300976 -13845732 + (CATCG)n Simple_repeat Simple_repeat 2 43 0 1 640 180 0 0 0 chr2R 7300976 7300996 -13845712 + (GATTG)n Simple_repeat Simple_repeat 3 22 0 1 640 29 28 0 0 chr2R 7301804 7301840 -13844868 + AT_rich Low_complexity Low_complexity 1 36 0 1 640 4506 2 0 0 chr2R 7303077 7303595 -13843113 + NOMAD_LTR LTR Gypsy 1 518 0 1 640 9379 1 3 1 chr2R 7303595 7304686 -13842022 + NOMAD_I LTR Gypsy 1 1093 -5479 1 640 9181 3 0 8 chr2R 7304682 7305764 -13840944 + NOMAD_I LTR Gypsy 5500 6572 0 1 640 3475 7 0 0 chr2R 7305764 7306169 -13840539 + NOMAD_LTR LTR Gypsy 114 518 0 1 640 225 94 0 0 chr2R 7315105 7315137 -13831571 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 640 200 271 0 0 chr2R 7320485 7320544 -13826164 + (CACCAT)n Simple_repeat Simple_repeat 3 61 0 1 640 194 0 0 37 chr2R 7322684 7322711 -13823997 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 1 640 25 31 0 0 chr2R 7322712 7322744 -13823964 + AT_rich Low_complexity Low_complexity 1 32 0 1 640 29 47 0 0 chr2R 7323595 7323638 -13823070 + AT_rich Low_complexity Low_complexity 1 43 0 1 640 30 27 0 0 chr2R 7328085 7328122 -13818586 + AT_rich Low_complexity Low_complexity 1 37 0 1 640 23 0 0 0 chr2R 7328537 7328560 -13818148 + AT_rich Low_complexity Low_complexity 1 23 0 1 640 296 77 0 19 chr2R 7329065 7329118 -13817590 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 640 24 32 0 0 chr2R 7329751 7329782 -13816926 + AT_rich Low_complexity Low_complexity 1 31 0 1 640 205 122 0 47 chr2R 7335610 7335653 -13811055 + (CGAAT)n Simple_repeat Simple_repeat 1 41 0 1 640 202 281 11 11 chr2R 7337359 7337449 -13809259 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 1 640 218 200 18 0 chr2R 7337384 7337439 -13809269 + CT-rich Low_complexity Low_complexity 2 57 0 1 641 21 0 0 0 chr2R 7340694 7340715 -13805993 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 222 222 12 36 chr2R 7341231 7341315 -13805393 + GA-rich Low_complexity Low_complexity 3 84 0 1 641 23 0 0 0 chr2R 7343745 7343768 -13802940 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 228 149 0 0 chr2R 7343958 7344005 -13802703 + (CAG)n Simple_repeat Simple_repeat 2 48 0 1 641 233 128 0 0 chr2R 7348276 7348323 -13798385 + ROO_I LTR Pao 679 725 -7531 1 641 200 176 0 0 chr2R 7348742 7348776 -13797932 + (CAG)n Simple_repeat Simple_repeat 1 34 0 1 641 28 48 0 0 chr2R 7349863 7349905 -13796803 + AT_rich Low_complexity Low_complexity 1 42 0 1 641 23 78 0 0 chr2R 7351692 7351743 -13794965 + AT_rich Low_complexity Low_complexity 1 51 0 1 641 27 0 0 0 chr2R 7352753 7352780 -13793928 + AT_rich Low_complexity Low_complexity 1 27 0 1 641 26 30 0 0 chr2R 7357618 7357651 -13789057 + AT_rich Low_complexity Low_complexity 1 33 0 1 641 180 152 0 0 chr2R 7358084 7358117 -13788591 + (ATGGTG)n Simple_repeat Simple_repeat 5 37 0 1 641 23 33 0 0 chr2R 7359123 7359153 -13787555 + AT_rich Low_complexity Low_complexity 1 30 0 1 641 5145 2 0 2 chr2R 7360206 7360766 -13785942 + POGO DNA Pogo 1 559 -1562 1 641 5219 0 0 3 chr2R 7360764 7361348 -13785360 + POGO DNA Pogo 1540 2121 0 1 641 246 260 0 0 chr2R 7363659 7363732 -13782976 + GA-rich Low_complexity Low_complexity 1 73 0 1 641 275 155 11 35 chr2R 7369326 7369413 -13777295 + (CAA)n Simple_repeat Simple_repeat 1 85 0 1 641 21 0 0 0 chr2R 7369559 7369580 -13777128 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 25 31 0 0 chr2R 7370038 7370070 -13776638 + AT_rich Low_complexity Low_complexity 1 32 0 1 641 205 296 0 0 chr2R 7372613 7372667 -13774041 + (CTGGGG)n Simple_repeat Simple_repeat 6 59 0 1 641 246 81 0 0 chr2R 7372798 7372835 -13773873 + (GGATG)n Simple_repeat Simple_repeat 3 39 0 1 641 200 282 0 14 chr2R 7376780 7376852 -13769856 + (TTG)n Simple_repeat Simple_repeat 3 73 0 1 641 195 69 0 0 chr2R 7377268 7377297 -13769411 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 641 265 82 0 39 chr2R 7379165 7379216 -13767492 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 1 641 192 135 0 0 chr2R 7381045 7381082 -13765626 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 641 22 80 0 0 chr2R 7381885 7381935 -13764773 + AT_rich Low_complexity Low_complexity 1 50 0 1 641 255 212 0 0 chr2R 7387225 7387310 -13759398 + (ATG)n Simple_repeat Simple_repeat 1 85 0 1 641 22 35 0 0 chr2R 7394657 7394686 -13752022 + AT_rich Low_complexity Low_complexity 1 29 0 1 641 231 216 0 0 chr2R 7395149 7395200 -13751508 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 641 22 35 0 0 chr2R 7395771 7395800 -13750908 + AT_rich Low_complexity Low_complexity 1 29 0 1 641 195 114 0 0 chr2R 7396097 7396132 -13750576 + (TATCG)n Simple_repeat Simple_repeat 2 36 0 1 641 216 178 0 0 chr2R 7400822 7400867 -13745841 + (CTG)n Simple_repeat Simple_repeat 1 45 0 1 641 219 114 0 0 chr2R 7406007 7406042 -13740666 + (A)n Simple_repeat Simple_repeat 1 35 0 1 641 258 194 0 0 chr2R 7407039 7407101 -13739607 + (CAGT)n Simple_repeat Simple_repeat 1 62 0 1 641 28 29 0 0 chr2R 7407442 7407477 -13739231 + AT_rich Low_complexity Low_complexity 1 35 0 1 641 213 188 42 0 chr2R 7410662 7410710 -13735998 + (CAGA)n Simple_repeat Simple_repeat 3 52 0 1 641 220 220 0 0 chr2R 7411954 7412004 -13734704 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 641 195 139 0 0 chr2R 7414939 7414975 -13731733 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 641 286 214 34 0 chr2R 7415015 7415104 -13731604 - ROO_I LTR Pao -7528 728 637 1 641 208 139 0 0 chr2R 7415696 7415732 -13730976 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 641 23 0 0 0 chr2R 7416914 7416937 -13729771 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 258 236 0 0 chr2R 7417445 7417500 -13729208 + (CTG)n Simple_repeat Simple_repeat 2 56 0 1 641 46 83 0 0 chr2R 7422293 7422402 -13724306 + AT_rich Low_complexity Low_complexity 1 109 0 1 641 224 322 23 11 chr2R 7426562 7426650 -13720058 + (CCCGAA)n Simple_repeat Simple_repeat 1 89 0 1 641 21 0 0 0 chr2R 7430737 7430758 -13715950 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 27 49 0 0 chr2R 7435576 7435617 -13711091 + AT_rich Low_complexity Low_complexity 1 41 0 1 641 268 298 14 47 chr2R 7435776 7435924 -13710784 + (TTG)n Simple_repeat Simple_repeat 2 144 0 1 641 207 182 0 0 chr2R 7438210 7438254 -13708454 + CT-rich Low_complexity Low_complexity 1 44 0 1 641 228 86 0 0 chr2R 7438415 7438450 -13708258 + (TTCGG)n Simple_repeat Simple_repeat 5 39 0 1 641 21 57 0 0 chr2R 7439043 7439078 -13707630 + AT_rich Low_complexity Low_complexity 1 35 0 1 641 25 65 0 0 chr2R 7440034 7440080 -13706628 + AT_rich Low_complexity Low_complexity 1 46 0 1 641 23 0 0 0 chr2R 7441596 7441619 -13705089 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 26 0 0 0 chr2R 7443188 7443214 -13703494 + AT_rich Low_complexity Low_complexity 1 26 0 1 641 26 0 0 0 chr2R 7445023 7445049 -13701659 + AT_rich Low_complexity Low_complexity 1 26 0 1 641 285 51 0 0 chr2R 7449501 7449540 -13697168 + (CGAAA)n Simple_repeat Simple_repeat 2 40 0 1 641 23 0 0 0 chr2R 7450967 7450990 -13695718 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 22 0 0 0 chr2R 7453707 7453729 -13692979 + AT_rich Low_complexity Low_complexity 1 22 0 1 641 21 0 0 0 chr2R 7457443 7457464 -13689244 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 21 0 0 0 chr2R 7458687 7458708 -13688000 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 294 121 45 0 chr2R 7459392 7459458 -13687250 + (TTAG)n Simple_repeat Simple_repeat 3 71 0 1 641 215 173 19 0 chr2R 7460340 7460392 -13686316 + (CCGAA)n Simple_repeat Simple_repeat 4 56 0 1 641 28 29 0 0 chr2R 7461052 7461087 -13685621 + AT_rich Low_complexity Low_complexity 1 35 0 1 641 225 132 0 0 chr2R 7462046 7462084 -13684624 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 641 228 67 0 0 chr2R 7462261 7462291 -13684417 + (GGAGAA)n Simple_repeat Simple_repeat 2 31 0 1 641 27 73 0 0 chr2R 7463570 7463625 -13683083 + AT_rich Low_complexity Low_complexity 1 55 0 1 641 201 39 0 0 chr2R 7465214 7465240 -13681468 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 641 25 31 0 0 chr2R 7466390 7466422 -13680286 + AT_rich Low_complexity Low_complexity 1 32 0 1 641 227 54 0 26 chr2R 7467005 7467043 -13679665 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 641 260 115 0 55 chr2R 7470867 7470922 -13675786 + (CTG)n Simple_repeat Simple_repeat 3 54 0 1 642 228 111 0 0 chr2R 7472344 7472380 -13674328 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1 642 235 204 0 0 chr2R 7477062 7477111 -13669597 + (CTG)n Simple_repeat Simple_repeat 1 49 0 1 642 224 164 15 0 chr2R 7477231 7477298 -13669410 + (TTG)n Simple_repeat Simple_repeat 2 69 0 1 642 192 125 0 0 chr2R 7478321 7478353 -13668355 + (CTG)n Simple_repeat Simple_repeat 3 34 0 1 642 229 326 0 0 chr2R 7478459 7478557 -13668151 + (CCA)n Simple_repeat Simple_repeat 2 99 0 1 642 29 0 0 0 chr2R 7482303 7482332 -13664376 + AT_rich Low_complexity Low_complexity 1 29 0 1 642 27 0 0 0 chr2R 7483043 7483070 -13663638 + AT_rich Low_complexity Low_complexity 1 27 0 1 642 201 154 0 0 chr2R 7484544 7484583 -13662125 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1 642 249 167 0 0 chr2R 7484658 7484712 -13661996 + (CAA)n Simple_repeat Simple_repeat 1 54 0 1 642 25 31 0 0 chr2R 7484810 7484842 -13661866 + AT_rich Low_complexity Low_complexity 1 32 0 1 642 234 241 0 17 chr2R 7485623 7485682 -13661026 + CT-rich Low_complexity Low_complexity 2 59 0 1 642 243 114 0 0 chr2R 7486196 7486240 -13660468 + (CAATC)n Simple_repeat Simple_repeat 1 44 0 1 642 30 27 0 0 chr2R 7487374 7487411 -13659297 + AT_rich Low_complexity Low_complexity 1 37 0 1 642 22 0 0 0 chr2R 7489521 7489543 -13657165 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 290 224 0 0 chr2R 7490988 7491064 -13655644 + CT-rich Low_complexity Low_complexity 3 78 0 1 642 212 0 0 35 chr2R 7492037 7492066 -13654642 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 642 183 167 0 0 chr2R 7492098 7492140 -13654568 + GA-rich Low_complexity Low_complexity 1 42 0 1 642 237 296 17 0 chr2R 7494645 7494760 -13651948 + GA-rich Low_complexity Low_complexity 3 119 0 1 642 207 196 0 0 chr2R 7496821 7496867 -13649841 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 1 642 22 0 0 0 chr2R 7500147 7500169 -13646539 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 201 190 0 23 chr2R 7501770 7501813 -13644895 + (CAA)n Simple_repeat Simple_repeat 1 42 0 1 642 226 206 16 16 chr2R 7501902 7501966 -13644742 + A-rich Low_complexity Low_complexity 4 67 0 1 642 25 0 0 0 chr2R 7502160 7502185 -13644523 + AT_rich Low_complexity Low_complexity 1 25 0 1 642 37 23 0 0 chr2R 7502318 7502362 -13644346 + AT_rich Low_complexity Low_complexity 1 44 0 1 642 192 200 0 0 chr2R 7502718 7502778 -13643930 + (CAA)n Simple_repeat Simple_repeat 3 62 0 1 642 25 0 0 0 chr2R 7505356 7505381 -13641327 + AT_rich Low_complexity Low_complexity 1 25 0 1 642 192 135 0 0 chr2R 7507696 7507733 -13638975 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 642 201 39 0 0 chr2R 7514031 7514057 -13632651 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 642 216 200 0 0 chr2R 7514081 7514121 -13632587 + T-rich Low_complexity Low_complexity 1 40 0 1 642 22 0 0 0 chr2R 7515496 7515518 -13631190 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 214 194 13 89 chr2R 7517161 7517240 -13629468 + A-rich Low_complexity Low_complexity 4 76 0 1 642 22 0 0 0 chr2R 7518510 7518532 -13628176 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 204 111 0 0 chr2R 7518694 7518730 -13627978 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 642 189 0 0 0 chr2R 7520707 7520728 -13625980 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 642 214 245 0 0 chr2R 7521106 7521159 -13625549 + CT-rich Low_complexity Low_complexity 1 53 0 1 642 21 36 0 0 chr2R 7521440 7521468 -13625240 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 195 125 0 0 chr2R 7521866 7521906 -13624802 + (CACTC)n Simple_repeat Simple_repeat 1 40 0 1 642 204 163 0 0 chr2R 7522546 7522589 -13624119 + T-rich Low_complexity Low_complexity 1 43 0 1 642 238 217 67 67 chr2R 7523281 7523370 -13623338 + ROO_I LTR Pao 228 316 -7940 1 642 26 0 0 0 chr2R 7524514 7524540 -13622168 + AT_rich Low_complexity Low_complexity 1 26 0 1 642 255 103 0 0 chr2R 7524864 7524903 -13621805 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 642 32 67 0 0 chr2R 7525472 7525532 -13621176 + AT_rich Low_complexity Low_complexity 1 60 0 1 642 266 256 0 35 chr2R 7526325 7526410 -13620298 + (TATG)n Simple_repeat Simple_repeat 3 84 0 1 642 285 314 16 0 chr2R 7526532 7526653 -13620055 + (TA)n Simple_repeat Simple_repeat 1 123 0 1 642 28 0 0 0 chr2R 7529113 7529141 -13617567 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 258 81 0 0 chr2R 7530463 7530500 -13616208 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 642 270 150 9 115 chr2R 7533147 7533260 -13613448 - ROO_I LTR Pao -7515 741 641 1 642 349 260 0 17 chr2R 7533376 7533552 -13613156 + (CTG)n Simple_repeat Simple_repeat 3 175 0 1 642 53 81 0 0 chr2R 7536459 7536582 -13610126 + AT_rich Low_complexity Low_complexity 1 123 0 1 642 250 250 16 39 chr2R 7538628 7538757 -13607951 + (TTG)n Simple_repeat Simple_repeat 1 126 0 1 642 21 0 0 0 chr2R 7540708 7540729 -13605979 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 27 29 0 0 chr2R 7540738 7540772 -13605936 + AT_rich Low_complexity Low_complexity 1 34 0 1 642 41 0 0 0 chr2R 7542472 7542513 -13604195 + AT_rich Low_complexity Low_complexity 1 41 0 1 642 26 30 0 0 chr2R 7544277 7544310 -13602398 + AT_rich Low_complexity Low_complexity 1 33 0 1 642 227 31 31 0 chr2R 7545019 7545051 -13601657 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 642 28 0 0 0 chr2R 7545292 7545320 -13601388 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 204 135 0 0 chr2R 7545374 7545411 -13601297 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 642 30 45 0 0 chr2R 7545763 7545807 -13600901 + AT_rich Low_complexity Low_complexity 1 44 0 1 642 21 82 0 0 chr2R 7547264 7547313 -13599395 + AT_rich Low_complexity Low_complexity 1 49 0 1 642 345 47 0 0 chr2R 7550455 7550498 -13596210 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 642 21 36 0 0 chr2R 7556449 7556477 -13590231 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 685 186 75 11 chr2R 7559823 7559997 -13586711 + DNAREP1_DM LINE Penelope 2 186 -408 1 642 484 110 409 0 chr2R 7560021 7560165 -13586543 + DNAREP1_DM LINE Penelope 384 586 -8 1 642 26 64 0 0 chr2R 7565996 7566043 -13580665 + AT_rich Low_complexity Low_complexity 1 47 0 1 642 209 114 0 64 chr2R 7566048 7566095 -13580613 + T-rich Low_complexity Low_complexity 4 47 0 1 642 275 151 19 19 chr2R 7566432 7566486 -13580222 - DNAREP1_DM LINE Penelope -540 54 1 1 642 208 191 31 31 chr2R 7567974 7568039 -13578669 + (TTTG)n Simple_repeat Simple_repeat 4 68 0 1 642 21 36 0 0 chr2R 7569106 7569134 -13577574 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 261 57 0 0 chr2R 7569400 7569435 -13577273 + (AAATG)n Simple_repeat Simple_repeat 1 35 0 1 642 24 53 0 0 chr2R 7569812 7569850 -13576858 + AT_rich Low_complexity Low_complexity 1 38 0 1 642 204 40 0 0 chr2R 7570463 7570488 -13576220 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 642 24 53 0 0 chr2R 7578516 7578554 -13568154 + AT_rich Low_complexity Low_complexity 1 38 0 1 642 27 73 0 0 chr2R 7578612 7578667 -13568041 + AT_rich Low_complexity Low_complexity 1 55 0 1 642 26 30 0 0 chr2R 7579804 7579837 -13566871 + AT_rich Low_complexity Low_complexity 1 33 0 1 642 213 121 0 0 chr2R 7580387 7580420 -13566288 + (CAGT)n Simple_repeat Simple_repeat 4 36 0 1 642 24 0 0 0 chr2R 7581152 7581176 -13565532 + AT_rich Low_complexity Low_complexity 1 24 0 1 642 21 36 0 0 chr2R 7585014 7585042 -13561666 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 230 143 0 20 chr2R 7585251 7585301 -13561407 + (ATTCG)n Simple_repeat Simple_repeat 5 53 0 1 642 29 28 0 0 chr2R 7587923 7587959 -13558749 + AT_rich Low_complexity Low_complexity 1 36 0 1 642 227 54 27 0 chr2R 7592802 7592839 -13553869 + (CAGAA)n Simple_repeat Simple_repeat 1 38 0 1 642 26 30 0 0 chr2R 7595190 7595223 -13551485 + AT_rich Low_complexity Low_complexity 1 33 0 1 642 22 35 0 0 chr2R 7596345 7596374 -13550334 + AT_rich Low_complexity Low_complexity 1 29 0 1 642 41 58 0 0 chr2R 7596407 7596476 -13550232 + AT_rich Low_complexity Low_complexity 1 69 0 1 643 186 103 0 0 chr2R 7603112 7603141 -13543567 + (A)n Simple_repeat Simple_repeat 1 29 0 1 643 28 0 0 0 chr2R 7604619 7604647 -13542061 + AT_rich Low_complexity Low_complexity 1 28 0 1 643 221 171 0 0 chr2R 7605832 7605873 -13540835 + (CAT)n Simple_repeat Simple_repeat 2 42 0 1 643 210 71 0 0 chr2R 7606129 7606157 -13540551 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 1 643 183 114 0 0 chr2R 7608310 7608345 -13538363 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1 643 26 0 0 0 chr2R 7608983 7609009 -13537699 + AT_rich Low_complexity Low_complexity 1 26 0 1 643 24 85 0 0 chr2R 7610469 7610528 -13536180 + AT_rich Low_complexity Low_complexity 1 59 0 1 643 339 155 0 0 chr2R 7612047 7612131 -13534577 + (CAA)n Simple_repeat Simple_repeat 3 86 0 1 643 333 118 0 0 chr2R 7612274 7612325 -13534383 + (CAA)n Simple_repeat Simple_repeat 1 51 0 1 643 201 300 0 0 chr2R 7612394 7612454 -13534254 + (CAG)n Simple_repeat Simple_repeat 3 62 0 1 643 180 97 0 0 chr2R 7612663 7612694 -13534014 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 643 242 160 0 0 chr2R 7613450 7613500 -13533208 + ROO_I LTR Pao 688 737 -7519 1 643 22 56 0 0 chr2R 7614657 7614693 -13532015 + AT_rich Low_complexity Low_complexity 1 36 0 1 643 205 200 0 0 chr2R 7616546 7616586 -13530122 + (ATTCG)n Simple_repeat Simple_repeat 1 40 0 1 643 25 51 0 0 chr2R 7617712 7617751 -13528957 + AT_rich Low_complexity Low_complexity 1 39 0 1 643 216 86 0 0 chr2R 7618232 7618267 -13528441 + (T)n Simple_repeat Simple_repeat 1 35 0 1 643 21 57 0 0 chr2R 7621660 7621695 -13525013 + AT_rich Low_complexity Low_complexity 1 35 0 1 643 25 31 0 0 chr2R 7622618 7622650 -13524058 + AT_rich Low_complexity Low_complexity 1 32 0 1 643 201 121 0 0 chr2R 7622873 7622906 -13523802 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 643 24 96 0 0 chr2R 7623677 7623750 -13522958 + AT_rich Low_complexity Low_complexity 1 73 0 1 643 22 0 0 0 chr2R 7625468 7625490 -13521218 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 192 200 0 0 chr2R 7626541 7626586 -13520122 + (CTG)n Simple_repeat Simple_repeat 3 47 0 1 643 189 0 0 0 chr2R 7629876 7629897 -13516811 + (TCC)n Simple_repeat Simple_repeat 1 21 0 1 643 43 0 0 0 chr2R 7636143 7636186 -13510522 + AT_rich Low_complexity Low_complexity 1 43 0 1 643 183 42 0 0 chr2R 7636498 7636522 -13510186 + (T)n Simple_repeat Simple_repeat 1 24 0 1 643 24 0 0 0 chr2R 7637064 7637088 -13509620 + AT_rich Low_complexity Low_complexity 1 24 0 1 643 180 0 0 0 chr2R 7637806 7637826 -13508882 + (CCAA)n Simple_repeat Simple_repeat 2 21 0 1 643 206 211 0 0 chr2R 7637932 7637970 -13508738 + (CGGA)n Simple_repeat Simple_repeat 3 40 0 1 643 30 0 0 0 chr2R 7638224 7638254 -13508454 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 23 33 0 0 chr2R 7638911 7638941 -13507767 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 30 0 0 0 chr2R 7642847 7642877 -13503831 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 24 32 0 0 chr2R 7643565 7643596 -13503112 + AT_rich Low_complexity Low_complexity 1 31 0 1 643 21 0 0 0 chr2R 7643627 7643648 -13503060 + AT_rich Low_complexity Low_complexity 1 21 0 1 643 192 77 0 0 chr2R 7644122 7644148 -13502560 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1 643 23 68 0 0 chr2R 7644413 7644457 -13502251 + AT_rich Low_complexity Low_complexity 1 44 0 1 643 28 0 0 0 chr2R 7644972 7645000 -13501708 + AT_rich Low_complexity Low_complexity 1 28 0 1 643 23 33 0 0 chr2R 7655522 7655552 -13491156 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 239 246 31 0 chr2R 7656058 7656123 -13490585 + (ACTG)n Simple_repeat Simple_repeat 2 68 0 1 643 200 121 0 29 chr2R 7661220 7661254 -13485454 + (ATATG)n Simple_repeat Simple_repeat 4 36 0 1 643 22 56 0 0 chr2R 7662031 7662067 -13484641 + AT_rich Low_complexity Low_complexity 1 36 0 1 643 24 32 0 0 chr2R 7662301 7662332 -13484376 + AT_rich Low_complexity Low_complexity 1 31 0 1 643 23 33 0 0 chr2R 7663214 7663244 -13483464 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 24 77 0 0 chr2R 7664493 7664545 -13482163 + AT_rich Low_complexity Low_complexity 1 52 0 1 643 22 0 0 0 chr2R 7675037 7675059 -13471649 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 21 36 0 0 chr2R 7677136 7677164 -13469544 + AT_rich Low_complexity Low_complexity 1 28 0 1 643 28 0 0 0 chr2R 7677232 7677260 -13469448 + AT_rich Low_complexity Low_complexity 1 28 0 1 643 44 46 0 0 chr2R 7677297 7677362 -13469346 + AT_rich Low_complexity Low_complexity 1 65 0 1 643 342 243 29 0 chr2R 7677717 7677820 -13468888 - ROO_I LTR Pao -7512 744 639 1 643 213 39 0 0 chr2R 7682509 7682535 -13464173 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 643 264 122 0 0 chr2R 7686215 7686256 -13460452 + (ATGGTG)n Simple_repeat Simple_repeat 3 43 0 1 643 224 279 0 0 chr2R 7689262 7689341 -13457367 + T-rich Low_complexity Low_complexity 1 79 0 1 643 180 152 0 0 chr2R 7689806 7689839 -13456869 + A-rich Low_complexity Low_complexity 1 33 0 1 643 24 32 0 0 chr2R 7692176 7692207 -13454501 + AT_rich Low_complexity Low_complexity 1 31 0 1 643 202 224 0 0 chr2R 7692688 7692737 -13453971 + T-rich Low_complexity Low_complexity 5 53 0 1 643 249 119 0 0 chr2R 7693437 7693479 -13453229 + (CGAAA)n Simple_repeat Simple_repeat 3 44 0 1 643 262 310 10 10 chr2R 7697599 7697700 -13449008 + ROO_I LTR Pao 638 738 -7518 1 643 183 167 0 0 chr2R 7697760 7697802 -13448906 + (TAA)n Simple_repeat Simple_repeat 3 44 0 1 643 354 307 0 43 chr2R 7697915 7698102 -13448606 + (CAG)n Simple_repeat Simple_repeat 1 179 0 1 643 195 42 0 0 chr2R 7698216 7698240 -13448468 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 643 186 43 0 0 chr2R 7698269 7698292 -13448416 + (CAG)n Simple_repeat Simple_repeat 2 24 0 1 643 187 175 17 17 chr2R 7698338 7698396 -13448312 + (CAG)n Simple_repeat Simple_repeat 2 59 0 1 643 240 317 13 53 chr2R 7698550 7698700 -13448008 + (CAG)n Simple_repeat Simple_repeat 2 145 0 1 643 303 104 0 0 chr2R 7700842 7700890 -13445818 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 643 30 0 0 0 chr2R 7700937 7700967 -13445741 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 25 0 0 0 chr2R 7701948 7701973 -13444735 + AT_rich Low_complexity Low_complexity 1 25 0 1 643 23 33 0 0 chr2R 7702977 7703007 -13443701 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 201 121 0 0 chr2R 7705651 7705684 -13441024 + (CAGTT)n Simple_repeat Simple_repeat 4 36 0 1 643 200 59 0 29 chr2R 7705820 7705855 -13440853 + (TGG)n Simple_repeat Simple_repeat 1 34 0 1 643 186 143 0 0 chr2R 7707288 7707323 -13439385 + (ACTG)n Simple_repeat Simple_repeat 1 35 0 1 643 203 173 0 19 chr2R 7707487 7707540 -13439168 + (CAG)n Simple_repeat Simple_repeat 1 52 0 1 643 21 36 0 0 chr2R 7707977 7708005 -13438703 + AT_rich Low_complexity Low_complexity 1 28 0 1 643 211 227 0 0 chr2R 7709900 7709944 -13436764 + (ATTCG)n Simple_repeat Simple_repeat 4 47 0 1 643 186 71 0 0 chr2R 7711323 7711351 -13435357 + (GGTTG)n Simple_repeat Simple_repeat 5 32 0 1 643 233 229 0 0 chr2R 7711383 7711431 -13435277 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 643 218 222 0 0 chr2R 7713192 7713237 -13433471 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 643 26 50 0 0 chr2R 7714560 7714600 -13432108 + AT_rich Low_complexity Low_complexity 1 40 0 1 643 25 0 0 0 chr2R 7716686 7716711 -13429997 + AT_rich Low_complexity Low_complexity 1 25 0 1 643 324 143 0 0 chr2R 7717647 7717703 -13429005 + (TTG)n Simple_repeat Simple_repeat 3 58 0 1 643 27 49 0 0 chr2R 7718121 7718162 -13428546 + AT_rich Low_complexity Low_complexity 1 41 0 1 643 225 0 0 0 chr2R 7718459 7718484 -13428224 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 643 303 28 0 0 chr2R 7718805 7718841 -13427867 + (T)n Simple_repeat Simple_repeat 1 36 0 1 643 214 261 0 30 chr2R 7719782 7719849 -13426859 + (GGGTG)n Simple_repeat Simple_repeat 5 69 0 1 643 216 250 0 0 chr2R 7721392 7721436 -13425272 + (CCCGAA)n Simple_repeat Simple_repeat 2 45 0 1 643 192 91 44 22 chr2R 7721879 7721924 -13424784 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 643 22 0 0 0 chr2R 7722004 7722026 -13424682 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 222 200 0 0 chr2R 7722351 7722391 -13424317 + (CCCA)n Simple_repeat Simple_repeat 2 41 0 1 643 213 209 0 0 chr2R 7723321 7723364 -13423344 + (CATA)n Simple_repeat Simple_repeat 2 44 0 1 643 216 143 0 0 chr2R 7724781 7724823 -13421885 + (AACTG)n Simple_repeat Simple_repeat 4 45 0 1 643 229 218 0 18 chr2R 7725852 7725908 -13420800 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 643 249 148 37 0 chr2R 7727079 7727133 -13419575 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 643 35 41 0 0 chr2R 7728949 7728998 -13417710 + AT_rich Low_complexity Low_complexity 1 49 0 1 644 201 259 0 0 chr2R 7733495 7733553 -13413155 + (CAA)n Simple_repeat Simple_repeat 3 60 0 1 644 198 0 0 0 chr2R 7751594 7751616 -13395092 + (T)n Simple_repeat Simple_repeat 1 22 0 1 644 26 0 0 0 chr2R 7752458 7752484 -13394224 + AT_rich Low_complexity Low_complexity 1 26 0 1 644 21 57 0 0 chr2R 7752803 7752838 -13393870 + AT_rich Low_complexity Low_complexity 1 35 0 1 644 22 35 0 0 chr2R 7756734 7756763 -13389945 + AT_rich Low_complexity Low_complexity 1 29 0 1 644 21 36 0 0 chr2R 7757462 7757490 -13389218 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 27 29 0 0 chr2R 7771481 7771515 -13375193 + AT_rich Low_complexity Low_complexity 1 34 0 1 644 241 150 60 48 chr2R 7773331 7773415 -13373293 + (TTTA)n Simple_repeat Simple_repeat 4 88 0 1 644 21 36 0 0 chr2R 7778795 7778823 -13367885 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 270 280 0 46 chr2R 7782487 7782618 -13364090 + (CAA)n Simple_repeat Simple_repeat 1 125 0 1 644 21 0 0 0 chr2R 7783343 7783364 -13363344 + AT_rich Low_complexity Low_complexity 1 21 0 1 644 22 0 0 0 chr2R 7790432 7790454 -13356254 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 279 0 0 0 chr2R 7796420 7796451 -13350257 + (CTG)n Simple_repeat Simple_repeat 1 31 0 1 644 186 103 0 0 chr2R 7796495 7796524 -13350184 + (AACTG)n Simple_repeat Simple_repeat 4 32 0 1 644 239 226 0 0 chr2R 7797926 7797979 -13348729 + (CAG)n Simple_repeat Simple_repeat 3 55 0 1 644 22 56 0 0 chr2R 7804222 7804258 -13342450 + AT_rich Low_complexity Low_complexity 1 36 0 1 644 22 0 0 0 chr2R 7804341 7804363 -13342345 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 29 28 0 0 chr2R 7808448 7808484 -13338224 + AT_rich Low_complexity Low_complexity 1 36 0 1 644 249 98 0 0 chr2R 7809464 7809505 -13337203 + (CAGAA)n Simple_repeat Simple_repeat 1 41 0 1 644 225 186 0 67 chr2R 7809597 7809672 -13337036 + (CTG)n Simple_repeat Simple_repeat 2 71 0 1 644 21 36 0 0 chr2R 7810337 7810365 -13336343 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 24 0 0 0 chr2R 7810400 7810424 -13336284 + AT_rich Low_complexity Low_complexity 1 24 0 1 644 21 36 0 0 chr2R 7813120 7813148 -13333560 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 22 0 0 0 chr2R 7820223 7820245 -13326463 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 30 27 0 0 chr2R 7824532 7824569 -13322139 + AT_rich Low_complexity Low_complexity 1 37 0 1 644 240 111 0 0 chr2R 7827661 7827697 -13319011 + (CAA)n Simple_repeat Simple_repeat 3 38 0 1 644 23 0 0 0 chr2R 7828332 7828355 -13318353 + AT_rich Low_complexity Low_complexity 1 23 0 1 644 249 33 0 0 chr2R 7829177 7829207 -13317501 + (GAA)n Simple_repeat Simple_repeat 2 31 0 1 644 22 35 0 0 chr2R 7830621 7830650 -13316058 + AT_rich Low_complexity Low_complexity 1 29 0 1 644 220 189 57 0 chr2R 7831953 7832006 -13314702 + (TCCA)n Simple_repeat Simple_repeat 1 56 0 1 644 192 111 0 0 chr2R 7835221 7835257 -13311451 + (CACTC)n Simple_repeat Simple_repeat 4 39 0 1 644 21 36 0 0 chr2R 7835569 7835597 -13311111 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 180 0 0 0 chr2R 7835935 7835955 -13310753 + (CATATA)n Simple_repeat Simple_repeat 4 23 0 1 644 25 0 0 0 chr2R 7836727 7836752 -13309956 + AT_rich Low_complexity Low_complexity 1 25 0 1 644 30 27 0 0 chr2R 7838993 7839030 -13307678 + AT_rich Low_complexity Low_complexity 1 37 0 1 644 186 43 0 0 chr2R 7841331 7841354 -13305354 + (TCCG)n Simple_repeat Simple_repeat 4 26 0 1 644 180 0 0 0 chr2R 7842124 7842144 -13304564 + (CAG)n Simple_repeat Simple_repeat 3 22 0 1 644 234 187 52 26 chr2R 7847904 7847981 -13298727 + (CTG)n Simple_repeat Simple_repeat 1 79 0 1 644 24 0 0 0 chr2R 7851680 7851704 -13295004 + AT_rich Low_complexity Low_complexity 1 24 0 1 644 207 309 0 11 chr2R 7852131 7852226 -13294482 + (CAA)n Simple_repeat Simple_repeat 1 94 0 1 644 200 302 0 0 chr2R 7853170 7853223 -13293485 + (CAA)n Simple_repeat Simple_repeat 3 55 0 1 644 291 212 0 29 chr2R 7853312 7853414 -13293294 + ROO_I LTR Pao 642 740 -7516 1 644 24 0 0 0 chr2R 7856278 7856302 -13290406 + AT_rich Low_complexity Low_complexity 1 24 0 1 644 21 0 0 0 chr2R 7856778 7856799 -13289909 + AT_rich Low_complexity Low_complexity 1 21 0 1 644 32 0 0 0 chr2R 7857008 7857040 -13289668 + AT_rich Low_complexity Low_complexity 1 32 0 1 644 28 48 0 0 chr2R 7857277 7857319 -13289389 + AT_rich Low_complexity Low_complexity 1 42 0 1 644 23 0 0 0 chr2R 7857918 7857941 -13288767 + AT_rich Low_complexity Low_complexity 1 23 0 1 644 33 0 0 0 chr2R 7860622 7860655 -13286053 + AT_rich Low_complexity Low_complexity 1 33 0 1 644 34 0 0 0 chr2R 7862057 7862091 -13284617 + AT_rich Low_complexity Low_complexity 1 34 0 1 645 21 71 0 0 chr2R 7870545 7870587 -13276121 + AT_rich Low_complexity Low_complexity 1 42 0 1 645 27 73 0 0 chr2R 7873127 7873182 -13273526 + AT_rich Low_complexity Low_complexity 1 55 0 1 645 21 36 0 0 chr2R 7879624 7879652 -13267056 + AT_rich Low_complexity Low_complexity 1 28 0 1 645 205 167 0 0 chr2R 7880159 7880195 -13266513 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 645 339 229 47 39 chr2R 7882087 7882109 -13264599 + P_DG DNA P 2737 2759 -129 1 645 741 106 65 8 chr2R 7882109 7882233 -13264475 - DNAREP1_DM LINE Penelope 0 594 464 1 645 26 50 0 0 chr2R 7882602 7882642 -13264066 + AT_rich Low_complexity Low_complexity 1 40 0 1 645 219 173 19 0 chr2R 7882681 7882733 -13263975 + GA-rich Low_complexity Low_complexity 1 53 0 1 645 23 33 0 0 chr2R 7889236 7889266 -13257442 + AT_rich Low_complexity Low_complexity 1 30 0 1 645 22 35 0 0 chr2R 7893766 7893795 -13252913 + AT_rich Low_complexity Low_complexity 1 29 0 1 645 228 111 0 0 chr2R 7895445 7895481 -13251227 + (CCGAA)n Simple_repeat Simple_repeat 4 39 0 1 645 22 35 0 0 chr2R 7897877 7897906 -13248802 + AT_rich Low_complexity Low_complexity 1 29 0 1 645 204 97 0 0 chr2R 7903096 7903127 -13243581 + (CGAGT)n Simple_repeat Simple_repeat 3 33 0 1 645 210 91 0 0 chr2R 7905107 7905140 -13241568 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 645 252 86 0 0 chr2R 7906661 7906696 -13240012 + (CGA)n Simple_repeat Simple_repeat 3 37 0 1 645 45 0 0 0 chr2R 7907597 7907642 -13239066 + AT_rich Low_complexity Low_complexity 1 45 0 1 645 327 49 0 0 chr2R 7909824 7909865 -13236843 + (CATAC)n Simple_repeat Simple_repeat 2 42 0 1 645 260 247 12 12 chr2R 7910718 7910804 -13235904 + (TA)n Simple_repeat Simple_repeat 2 87 0 1 645 208 0 62 0 chr2R 7913101 7913133 -13233575 + (TTAAA)n Simple_repeat Simple_repeat 4 37 0 1 645 22 35 0 0 chr2R 7926400 7926429 -13220279 + AT_rich Low_complexity Low_complexity 1 29 0 1 645 21 36 0 0 chr2R 7930109 7930137 -13216571 + AT_rich Low_complexity Low_complexity 1 28 0 1 645 35 0 0 0 chr2R 7931897 7931932 -13214776 + AT_rich Low_complexity Low_complexity 1 35 0 1 645 36 23 0 0 chr2R 7933760 7933803 -13212905 + AT_rich Low_complexity Low_complexity 1 43 0 1 645 192 77 0 0 chr2R 7940243 7940269 -13206439 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1 645 198 0 0 0 chr2R 7940560 7940582 -13206126 + (CAG)n Simple_repeat Simple_repeat 3 24 0 1 645 23 0 0 0 chr2R 7940978 7941001 -13205707 + AT_rich Low_complexity Low_complexity 1 23 0 1 645 216 111 0 0 chr2R 7942387 7942423 -13204285 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 645 33 43 0 0 chr2R 7943039 7943086 -13203622 + AT_rich Low_complexity Low_complexity 1 47 0 1 645 200 200 0 0 chr2R 7943579 7943619 -13203089 + GA-rich Low_complexity Low_complexity 2 41 0 1 645 27 0 0 0 chr2R 7949963 7949990 -13196718 + AT_rich Low_complexity Low_complexity 1 27 0 1 645 218 204 0 0 chr2R 7950284 7950333 -13196375 + A-rich Low_complexity Low_complexity 1 49 0 1 645 180 152 0 0 chr2R 7958409 7958442 -13188266 + A-rich Low_complexity Low_complexity 2 34 0 1 645 198 71 0 0 chr2R 7959070 7959098 -13187610 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 645 37 62 0 0 chr2R 7959642 7959707 -13187001 + AT_rich Low_complexity Low_complexity 1 65 0 1 645 212 255 0 0 chr2R 7960291 7960342 -13186366 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 645 207 170 0 0 chr2R 7960600 7960647 -13186061 + (CAT)n Simple_repeat Simple_repeat 1 47 0 1 645 24 0 0 0 chr2R 7967270 7967294 -13179414 + AT_rich Low_complexity Low_complexity 1 24 0 1 645 189 100 39 20 chr2R 7971635 7971686 -13175022 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 645 256 352 0 7 chr2R 7972951 7973097 -13173611 + (TA)n Simple_repeat Simple_repeat 1 145 0 1 645 208 250 11 22 chr2R 7973384 7973474 -13173234 + (TTCTG)n Simple_repeat Simple_repeat 4 92 0 1 645 252 170 0 0 chr2R 7973831 7973884 -13172824 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 645 201 74 0 0 chr2R 7974740 7974767 -13171941 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 645 202 258 65 0 chr2R 7976283 7976376 -13170332 + T-rich Low_complexity Low_complexity 3 101 0 1 645 25 0 0 0 chr2R 7976389 7976414 -13170294 + AT_rich Low_complexity Low_complexity 1 25 0 1 645 219 119 48 0 chr2R 7976491 7976533 -13170175 + (CAGAGA)n Simple_repeat Simple_repeat 5 48 0 1 645 186 171 0 0 chr2R 7976854 7976895 -13169813 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 645 234 0 0 0 chr2R 7977468 7977494 -13169214 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 645 276 53 0 0 chr2R 7978754 7978792 -13167916 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 645 33 25 0 0 chr2R 7979509 7979549 -13167159 + AT_rich Low_complexity Low_complexity 1 40 0 1 645 22 0 0 0 chr2R 7979704 7979726 -13166982 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 222 37 0 0 chr2R 7980067 7980094 -13166614 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 645 271 169 0 27 chr2R 7983598 7983671 -13163037 + (CAA)n Simple_repeat Simple_repeat 1 71 0 1 645 186 103 0 0 chr2R 7984128 7984157 -13162551 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 645 216 0 0 0 chr2R 7985197 7985221 -13161487 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 645 210 143 0 0 chr2R 7986599 7986634 -13160074 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 645 183 42 0 0 chr2R 7986844 7986868 -13159840 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 645 246 32 0 0 chr2R 7987114 7987145 -13159563 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 645 252 0 0 0 chr2R 7987245 7987273 -13159435 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 645 186 128 0 0 chr2R 7987915 7987954 -13158754 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 645 186 118 0 0 chr2R 7988156 7988190 -13158518 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 645 327 65 0 0 chr2R 7988734 7988780 -13157928 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 645 263 72 0 23 chr2R 7989865 7989908 -13156800 + (TAAAAA)n Simple_repeat Simple_repeat 3 44 0 1 645 251 224 0 0 chr2R 7990562 7990620 -13156088 + T-rich Low_complexity Low_complexity 1 58 0 1 645 204 40 0 0 chr2R 7991404 7991429 -13155279 + (CAG)n Simple_repeat Simple_repeat 2 26 0 1 645 279 54 0 0 chr2R 7991984 7992021 -13154687 + (CATA)n Simple_repeat Simple_repeat 4 40 0 1 645 198 128 0 0 chr2R 7992221 7992260 -13154448 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 1 645 208 229 0 0 chr2R 7993621 7993669 -13153039 + (GCATG)n Simple_repeat Simple_repeat 3 50 0 1 645 210 143 0 0 chr2R 7994862 7994911 -13151797 + (CATTC)n Simple_repeat Simple_repeat 3 51 0 1 645 270 0 0 0 chr2R 7994989 7995019 -13151689 + (CAGC)n Simple_repeat Simple_repeat 2 31 0 1 646 195 69 0 0 chr2R 7998208 7998237 -13148471 + (CTTAA)n Simple_repeat Simple_repeat 3 31 0 1 646 214 235 0 0 chr2R 7998824 7998875 -13147833 + CT-rich Low_complexity Low_complexity 2 52 0 1 646 218 143 0 20 chr2R 7999141 7999191 -13147517 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 646 186 143 0 0 chr2R 8001014 8001049 -13145659 + (CAGA)n Simple_repeat Simple_repeat 3 37 0 1 646 218 217 0 0 chr2R 8001290 8001336 -13145372 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 646 202 182 0 0 chr2R 8003546 8003579 -13143129 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 646 22 56 0 0 chr2R 8006270 8006306 -13140402 + AT_rich Low_complexity Low_complexity 1 36 0 1 646 223 314 0 0 chr2R 8006420 8006490 -13140218 + (CCG)n Simple_repeat Simple_repeat 3 72 0 1 646 216 111 0 0 chr2R 8006732 8006768 -13139940 + (CTG)n Simple_repeat Simple_repeat 1 36 0 1 646 30 69 0 0 chr2R 8009601 8009659 -13137049 + AT_rich Low_complexity Low_complexity 1 58 0 1 646 399 88 235 0 chr2R 8012811 8012879 -13133829 + DMRP1 Unknown Unknown 190 273 -73 1 646 291 93 0 0 chr2R 8013520 8013563 -13133145 + (ATG)n Simple_repeat Simple_repeat 3 45 0 1 646 41 0 0 0 chr2R 8015234 8015275 -13131433 + AT_rich Low_complexity Low_complexity 1 41 0 1 646 448 98 0 0 chr2R 8015766 8015827 -13130881 + DNAREP1_DM LINE Penelope 1 61 -533 1 646 292 131 445 0 chr2R 8015840 8015950 -13130758 + DNAREP1_DM LINE Penelope 428 586 -8 1 646 198 0 0 0 chr2R 8016596 8016618 -13130090 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 646 236 321 0 0 chr2R 8019217 8019301 -13127407 + (TG)n Simple_repeat Simple_repeat 1 84 0 1 646 24 32 0 0 chr2R 8019973 8020004 -13126704 + AT_rich Low_complexity Low_complexity 1 31 0 1 646 204 40 0 0 chr2R 8020025 8020050 -13126658 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 1 646 214 261 0 0 chr2R 8021082 8021128 -13125580 + (CATCT)n Simple_repeat Simple_repeat 4 49 0 1 646 207 265 14 29 chr2R 8021405 8021475 -13125233 + (CATATA)n Simple_repeat Simple_repeat 6 74 0 1 646 294 180 0 0 chr2R 8023946 8024007 -13122701 + (CAAA)n Simple_repeat Simple_repeat 2 62 0 1 646 1194 99 114 5 chr2R 8025985 8026187 -13120521 + DNAREP1_DM LINE Penelope 371 594 0 1 646 212 179 0 0 chr2R 8027441 8027480 -13119228 + T-rich Low_complexity Low_complexity 5 43 0 1 646 39 38 0 0 chr2R 8027867 8027920 -13118788 + AT_rich Low_complexity Low_complexity 1 53 0 1 646 241 118 51 38 chr2R 8030594 8030673 -13116035 + (CACAC)n Simple_repeat Simple_repeat 1 80 0 1 646 213 94 0 0 chr2R 8034108 8034140 -13112568 + (TTCTG)n Simple_repeat Simple_repeat 4 35 0 1 646 236 307 0 0 chr2R 8034859 8034947 -13111761 + CT-rich Low_complexity Low_complexity 2 89 0 1 646 218 177 62 12 chr2R 8054509 8054589 -13092119 + T-rich Low_complexity Low_complexity 5 88 0 1 646 216 154 0 49 chr2R 8059431 8059472 -13087236 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1 646 21 0 0 0 chr2R 8060941 8060962 -13085746 + AT_rich Low_complexity Low_complexity 1 21 0 1 646 236 200 0 0 chr2R 8069205 8069255 -13077453 + (CCA)n Simple_repeat Simple_repeat 1 50 0 1 646 23 0 0 0 chr2R 8071871 8071894 -13074814 + AT_rich Low_complexity Low_complexity 1 23 0 1 646 36 23 0 0 chr2R 8088509 8088552 -13058156 + AT_rich Low_complexity Low_complexity 1 43 0 1 646 348 94 0 0 chr2R 8089285 8089338 -13057370 + (CTG)n Simple_repeat Simple_repeat 1 53 0 1 646 24 0 0 0 chr2R 8090845 8090869 -13055839 + AT_rich Low_complexity Low_complexity 1 24 0 1 646 21 36 0 0 chr2R 8092443 8092471 -13054237 + AT_rich Low_complexity Low_complexity 1 28 0 1 646 302 146 122 0 chr2R 8094694 8094776 -13051932 + (ATATG)n Simple_repeat Simple_repeat 2 93 0 1 646 279 0 0 0 chr2R 8096901 8096932 -13049776 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 646 25 51 0 0 chr2R 8098906 8098945 -13047763 + AT_rich Low_complexity Low_complexity 1 39 0 1 646 225 196 0 21 chr2R 8100171 8100218 -13046490 + GA-rich Low_complexity Low_complexity 2 47 0 1 646 26 0 0 0 chr2R 8100501 8100527 -13046181 + AT_rich Low_complexity Low_complexity 1 26 0 1 646 30 0 0 0 chr2R 8106401 8106431 -13040277 + AT_rich Low_complexity Low_complexity 1 30 0 1 646 25 0 0 0 chr2R 8109947 8109972 -13036736 + AT_rich Low_complexity Low_complexity 1 25 0 1 646 36 23 0 0 chr2R 8111036 8111079 -13035629 + AT_rich Low_complexity Low_complexity 1 43 0 1 646 183 100 0 0 chr2R 8112055 8112085 -13034623 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 646 198 103 0 0 chr2R 8113588 8113617 -13033091 + (CACCAT)n Simple_repeat Simple_repeat 6 34 0 1 646 26 0 0 0 chr2R 8114742 8114768 -13031940 + AT_rich Low_complexity Low_complexity 1 26 0 1 646 22 80 0 0 chr2R 8115855 8115905 -13030803 + AT_rich Low_complexity Low_complexity 1 50 0 1 646 24 0 0 0 chr2R 8117933 8117957 -13028751 + AT_rich Low_complexity Low_complexity 1 24 0 1 646 195 100 0 0 chr2R 8119119 8119149 -13027559 + (T)n Simple_repeat Simple_repeat 1 30 0 1 646 189 74 0 0 chr2R 8121768 8121795 -13024913 + (CAT)n Simple_repeat Simple_repeat 3 29 0 1 646 21 36 0 0 chr2R 8122847 8122875 -13023833 + AT_rich Low_complexity Low_complexity 1 28 0 1 646 24 0 0 0 chr2R 8123304 8123328 -13023380 + AT_rich Low_complexity Low_complexity 1 24 0 1 646 24 32 0 0 chr2R 8124406 8124437 -13022271 + AT_rich Low_complexity Low_complexity 1 31 0 1 647 30 45 0 0 chr2R 8127291 8127335 -13019373 + AT_rich Low_complexity Low_complexity 1 44 0 1 647 23 0 0 0 chr2R 8128315 8128338 -13018370 + AT_rich Low_complexity Low_complexity 1 23 0 1 647 233 212 0 101 chr2R 8132388 8132477 -13014231 - DNAREP1_DM LINE Penelope -89 505 426 1 647 24 32 0 0 chr2R 8133859 8133890 -13012818 + AT_rich Low_complexity Low_complexity 1 31 0 1 647 1331 112 36 0 chr2R 8135201 8135424 -13011284 + DNAREP1_DM LINE Penelope 1 231 -363 1 647 393 41 0 0 chr2R 8135492 8135541 -13011167 + DNAREP1_DM LINE Penelope 546 594 0 1 647 23 0 0 0 chr2R 8136642 8136665 -13010043 + AT_rich Low_complexity Low_complexity 1 23 0 1 647 225 94 0 0 chr2R 8137155 8137187 -13009521 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 647 24 0 0 0 chr2R 8138631 8138655 -13008053 + AT_rich Low_complexity Low_complexity 1 24 0 1 647 24 0 0 0 chr2R 8140852 8140876 -13005832 + AT_rich Low_complexity Low_complexity 1 24 0 1 647 255 61 0 0 chr2R 8143647 8143680 -13003028 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 647 203 211 19 0 chr2R 8151859 8151911 -12994797 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 647 189 107 0 0 chr2R 8153570 8153598 -12993110 + (CTG)n Simple_repeat Simple_repeat 3 30 0 1 647 192 77 0 0 chr2R 8153715 8153741 -12992967 + (T)n Simple_repeat Simple_repeat 1 26 0 1 647 230 136 23 0 chr2R 8154798 8154842 -12991866 + (CAT)n Simple_repeat Simple_repeat 1 45 0 1 647 189 0 0 0 chr2R 8156261 8156282 -12990426 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 647 210 154 0 0 chr2R 8157785 8157824 -12988884 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 647 264 167 0 0 chr2R 8158720 8158768 -12987940 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 1 647 237 98 0 0 chr2R 8159157 8159198 -12987510 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 647 22 0 0 0 chr2R 8160568 8160590 -12986118 + AT_rich Low_complexity Low_complexity 1 22 0 1 647 244 183 0 58 chr2R 8161415 8161502 -12985206 + A-rich Low_complexity Low_complexity 3 84 0 1 647 237 77 0 71 chr2R 8162096 8162152 -12984556 + (TAAAAA)n Simple_repeat Simple_repeat 2 53 0 1 647 200 172 17 0 chr2R 8162222 8162280 -12984428 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 647 31 44 0 0 chr2R 8162294 8162339 -12984369 + AT_rich Low_complexity Low_complexity 1 45 0 1 647 22 0 0 0 chr2R 8162366 8162388 -12984320 + AT_rich Low_complexity Low_complexity 1 22 0 1 647 224 217 0 0 chr2R 8162388 8162448 -12984260 + A-rich Low_complexity Low_complexity 1 60 0 1 647 219 125 0 0 chr2R 8162638 8162678 -12984030 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 647 37 23 0 0 chr2R 8162881 8162925 -12983783 + AT_rich Low_complexity Low_complexity 1 44 0 1 647 200 154 19 0 chr2R 8163123 8163175 -12983533 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 647 244 173 0 19 chr2R 8163443 8163496 -12983212 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1 647 250 262 12 0 chr2R 8164498 8164578 -12982130 + (TA)n Simple_repeat Simple_repeat 2 82 0 1 647 21 36 0 0 chr2R 8166228 8166256 -12980452 + AT_rich Low_complexity Low_complexity 1 28 0 1 647 203 255 20 0 chr2R 8167127 8167178 -12979530 + (CTG)n Simple_repeat Simple_repeat 1 52 0 1 647 198 0 0 0 chr2R 8167370 8167392 -12979316 + (CTG)n Simple_repeat Simple_repeat 3 24 0 1 647 24 32 0 0 chr2R 8171063 8171094 -12975614 + AT_rich Low_complexity Low_complexity 1 31 0 1 647 204 97 0 0 chr2R 8174790 8174821 -12971887 + (TCC)n Simple_repeat Simple_repeat 3 33 0 1 647 186 43 0 0 chr2R 8176296 8176319 -12970389 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 647 28 0 0 0 chr2R 8180458 8180486 -12966222 + AT_rich Low_complexity Low_complexity 1 28 0 1 647 362 153 0 93 chr2R 8182990 8183098 -12963610 + ROO_I LTR Pao 641 738 -7518 1 647 197 0 0 67 chr2R 8194978 8195008 -12951700 + (TTAAA)n Simple_repeat Simple_repeat 5 32 0 1 647 31 44 0 0 chr2R 8204955 8205000 -12941708 + AT_rich Low_complexity Low_complexity 1 45 0 1 647 12026 29 75 16 chr2R 8205403 8206954 -12939754 + TC1-2_DM DNA Tc1 1 1644 0 1 647 203 57 0 79 chr2R 8208451 8208489 -12938219 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 1 647 21 0 0 0 chr2R 8210020 8210041 -12936667 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 36 0 0 0 chr2R 8210388 8210424 -12936284 + AT_rich Low_complexity Low_complexity 1 36 0 1 647 229 238 0 0 chr2R 8220553 8220616 -12926092 + ROO_I LTR Pao 667 729 -7527 1 647 216 143 0 0 chr2R 8220842 8220884 -12925824 + (CAG)n Simple_repeat Simple_repeat 1 42 0 1 647 29 0 0 0 chr2R 8221230 8221259 -12925449 + AT_rich Low_complexity Low_complexity 1 29 0 1 647 202 194 0 0 chr2R 8223713 8223749 -12922959 + (CATA)n Simple_repeat Simple_repeat 1 36 0 1 647 31 88 0 0 chr2R 8225167 8225247 -12921461 + AT_rich Low_complexity Low_complexity 1 80 0 1 647 22 0 0 0 chr2R 8229704 8229726 -12916982 + AT_rich Low_complexity Low_complexity 1 22 0 1 647 23 0 0 0 chr2R 8232237 8232260 -12914448 + AT_rich Low_complexity Low_complexity 1 23 0 1 647 25 0 0 0 chr2R 8252020 8252045 -12894663 + AT_rich Low_complexity Low_complexity 1 25 0 1 648 200 325 0 0 chr2R 8262931 8263051 -12883657 + (CCA)n Simple_repeat Simple_repeat 1 120 0 1 648 213 121 0 0 chr2R 8263919 8263952 -12882756 + (TTCGG)n Simple_repeat Simple_repeat 3 35 0 1 648 288 91 0 0 chr2R 8266293 8266337 -12880371 + (TGG)n Simple_repeat Simple_repeat 2 45 0 1 648 189 74 0 0 chr2R 8270364 8270391 -12876317 + (A)n Simple_repeat Simple_repeat 1 27 0 1 648 180 0 0 0 chr2R 8276478 8276498 -12870210 + (CCA)n Simple_repeat Simple_repeat 3 22 0 1 648 322 197 15 0 chr2R 8278201 8278267 -12868441 + DNAREP1_DM LINE Penelope 1 67 -527 1 648 23 54 0 0 chr2R 8278443 8278480 -12868228 + AT_rich Low_complexity Low_complexity 1 37 0 1 648 587 161 188 97 chr2R 8279304 8279469 -12867239 + DNAREP1_DM LINE Penelope 415 594 0 1 648 201 258 32 0 chr2R 8289474 8289536 -12857172 + (CCCA)n Simple_repeat Simple_repeat 2 65 0 1 648 198 0 0 0 chr2R 8296320 8296342 -12850366 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 648 180 0 0 0 chr2R 8300412 8300432 -12846276 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 648 25 90 0 0 chr2R 8300667 8300734 -12845974 + AT_rich Low_complexity Low_complexity 1 67 0 1 648 21 0 0 0 chr2R 8302567 8302588 -12844120 + AT_rich Low_complexity Low_complexity 1 21 0 1 648 29 0 0 0 chr2R 8306990 8307019 -12839689 + AT_rich Low_complexity Low_complexity 1 29 0 1 648 381 179 0 0 chr2R 8307158 8307225 -12839483 - DNAREP1_DM LINE Penelope -527 67 1 1 648 34 0 0 0 chr2R 8319416 8319450 -12827258 + AT_rich Low_complexity Low_complexity 1 34 0 1 648 212 147 0 0 chr2R 8327875 8327909 -12818799 + (TCTCC)n Simple_repeat Simple_repeat 1 34 0 1 648 267 239 0 0 chr2R 8328406 8328477 -12818231 + CT-rich Low_complexity Low_complexity 1 71 0 1 648 204 40 0 0 chr2R 8329192 8329217 -12817491 + (TCG)n Simple_repeat Simple_repeat 3 27 0 1 648 203 61 30 0 chr2R 8341653 8341686 -12805022 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 648 213 289 0 0 chr2R 8347140 8347192 -12799516 + (TTGGGG)n Simple_repeat Simple_repeat 5 56 0 1 648 29 0 0 0 chr2R 8352853 8352882 -12793826 + AT_rich Low_complexity Low_complexity 1 29 0 1 648 238 253 0 0 chr2R 8353095 8353174 -12793534 + A-rich Low_complexity Low_complexity 1 79 0 1 648 23 33 0 0 chr2R 8355706 8355736 -12790972 + AT_rich Low_complexity Low_complexity 1 30 0 1 648 33 43 0 0 chr2R 8356020 8356067 -12790641 + AT_rich Low_complexity Low_complexity 1 47 0 1 648 243 79 0 0 chr2R 8356751 8356789 -12789919 + (GGA)n Simple_repeat Simple_repeat 2 39 0 1 648 291 130 0 0 chr2R 8356972 8357026 -12789682 + (ATG)n Simple_repeat Simple_repeat 3 56 0 1 648 202 219 0 0 chr2R 8363392 8363433 -12783275 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 648 22 0 0 0 chr2R 8364046 8364068 -12782640 + AT_rich Low_complexity Low_complexity 1 22 0 1 648 222 37 0 0 chr2R 8365033 8365060 -12781648 + (TCCA)n Simple_repeat Simple_repeat 4 30 0 1 648 285 155 0 0 chr2R 8365129 8365187 -12781521 + (ATTCG)n Simple_repeat Simple_repeat 2 59 0 1 648 203 147 0 0 chr2R 8366307 8366341 -12780367 + (CAT)n Simple_repeat Simple_repeat 3 36 0 1 648 213 132 0 0 chr2R 8367003 8367041 -12779667 + (AGATG)n Simple_repeat Simple_repeat 4 41 0 1 648 3948 2 0 2 chr2R 8368696 8369125 -12777583 - ROO_LTR LTR Pao 0 428 1 1 648 7806 10 0 0 chr2R 8369125 8370013 -12776695 - ROO_I LTR Pao 0 8256 7369 1 648 3948 2 0 2 chr2R 8370013 8370442 -12776266 - ROO_LTR LTR Pao 0 428 1 1 648 224 131 0 21 chr2R 8373690 8373737 -12772971 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1 648 192 77 0 0 chr2R 8382101 8382127 -12764581 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 648 219 36 0 0 chr2R 8385277 8385305 -12761403 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 648 189 159 0 0 chr2R 8386937 8386981 -12759727 + (CCAA)n Simple_repeat Simple_repeat 3 46 0 1 648 322 213 0 0 chr2R 8387571 8387646 -12759062 + ROO_I LTR Pao 651 725 -7531 1 649 19248 2 0 0 chr2R 8389255 8391329 -12755379 + DMRT1B LINE R1 3110 5183 0 1 649 207 0 0 0 chr2R 8391329 8391352 -12755356 + (A)n Simple_repeat Simple_repeat 1 23 0 1 649 243 125 0 0 chr2R 8392276 8392316 -12754392 + (CTG)n Simple_repeat Simple_repeat 1 40 0 1 649 183 100 0 0 chr2R 8392586 8392616 -12754092 + (C)n Simple_repeat Simple_repeat 1 30 0 1 649 240 273 65 0 chr2R 8393399 8393476 -12753232 - UHU DNA Tc1 -438 1217 1136 1 649 474 49 0 0 chr2R 8395655 8395716 -12750992 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 649 36 23 0 0 chr2R 8395901 8395944 -12750764 + AT_rich Low_complexity Low_complexity 1 43 0 1 649 28 0 0 0 chr2R 8398272 8398300 -12748408 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 1076 168 59 43 chr2R 8398540 8399002 -12747706 - DNAREP1_DM LINE Penelope 0 594 2 1 649 23 33 0 0 chr2R 8399087 8399117 -12747591 + AT_rich Low_complexity Low_complexity 1 30 0 1 649 216 111 0 0 chr2R 8399482 8399518 -12747190 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 649 23 33 0 0 chr2R 8399704 8399734 -12746974 + AT_rich Low_complexity Low_complexity 1 30 0 1 649 21 36 0 0 chr2R 8402108 8402136 -12744572 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 516 217 0 106 chr2R 8410375 8410545 -12736163 + DNAREP1_DM LINE Penelope 24 175 -419 1 649 482 141 417 7 chr2R 8410582 8410715 -12735993 + DNAREP1_DM LINE Penelope 406 594 0 1 649 32 67 0 0 chr2R 8413905 8413965 -12732743 + AT_rich Low_complexity Low_complexity 1 60 0 1 649 287 282 0 0 chr2R 8414294 8414365 -12732343 - DNAREP1_DM LINE Penelope -523 71 1 1 649 25 0 0 0 chr2R 8416102 8416127 -12730581 + AT_rich Low_complexity Low_complexity 1 25 0 1 649 21 36 0 0 chr2R 8417531 8417559 -12729149 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 201 39 0 0 chr2R 8420558 8420584 -12726124 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 649 186 71 0 0 chr2R 8422392 8422420 -12724288 + (TTCGG)n Simple_repeat Simple_repeat 4 31 0 1 649 21 71 0 0 chr2R 8423984 8424026 -12722682 + AT_rich Low_complexity Low_complexity 1 42 0 1 649 200 189 0 0 chr2R 8424287 8424324 -12722384 + GA-rich Low_complexity Low_complexity 2 38 0 1 649 21 0 0 0 chr2R 8424653 8424674 -12722034 + AT_rich Low_complexity Low_complexity 1 21 0 1 649 207 100 0 0 chr2R 8428023 8428053 -12718655 + (TCCA)n Simple_repeat Simple_repeat 2 31 0 1 649 207 88 0 0 chr2R 8429919 8429953 -12716755 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1 649 240 59 0 0 chr2R 8431029 8431063 -12715645 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 649 213 200 0 0 chr2R 8431118 8431158 -12715550 + (GGATG)n Simple_repeat Simple_repeat 2 41 0 1 649 29 0 0 0 chr2R 8432538 8432567 -12714141 + AT_rich Low_complexity Low_complexity 1 29 0 1 649 180 0 0 0 chr2R 8435435 8435455 -12711253 + (TCG)n Simple_repeat Simple_repeat 1 20 0 1 649 219 69 0 0 chr2R 8436249 8436278 -12710430 + (CAT)n Simple_repeat Simple_repeat 2 30 0 1 649 192 182 0 0 chr2R 8436550 8436594 -12710114 + (ATG)n Simple_repeat Simple_repeat 2 45 0 1 649 203 147 0 0 chr2R 8446216 8446250 -12700458 + (CGA)n Simple_repeat Simple_repeat 3 36 0 1 649 22 0 0 0 chr2R 8457585 8457607 -12689101 + AT_rich Low_complexity Low_complexity 1 22 0 1 649 209 111 43 43 chr2R 8463524 8463571 -12683137 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 649 234 91 0 0 chr2R 8464247 8464280 -12682428 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1 649 317 176 0 13 chr2R 8465828 8465903 -12680805 + (TGG)n Simple_repeat Simple_repeat 2 75 0 1 649 189 74 0 0 chr2R 8466359 8466386 -12680322 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 649 21 36 0 0 chr2R 8468492 8468520 -12678188 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 216 179 0 0 chr2R 8476009 8476048 -12670660 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 649 201 108 0 0 chr2R 8479751 8479788 -12666920 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 649 27 0 0 0 chr2R 8485631 8485658 -12661050 + AT_rich Low_complexity Low_complexity 1 27 0 1 649 21 57 0 0 chr2R 8490390 8490425 -12656283 + AT_rich Low_complexity Low_complexity 1 35 0 1 649 32 0 0 0 chr2R 8499472 8499504 -12647204 + AT_rich Low_complexity Low_complexity 1 32 0 1 649 229 164 0 35 chr2R 8501275 8501332 -12645376 + (CAA)n Simple_repeat Simple_repeat 2 56 0 1 649 22 0 0 0 chr2R 8507270 8507292 -12639416 + AT_rich Low_complexity Low_complexity 1 22 0 1 649 22 35 0 0 chr2R 8508266 8508295 -12638413 + AT_rich Low_complexity Low_complexity 1 29 0 1 649 21 0 0 0 chr2R 8513415 8513436 -12633272 + AT_rich Low_complexity Low_complexity 1 21 0 1 649 22 35 0 0 chr2R 8513781 8513810 -12632898 + AT_rich Low_complexity Low_complexity 1 29 0 1 649 22 35 0 0 chr2R 8515050 8515079 -12631629 + AT_rich Low_complexity Low_complexity 1 29 0 1 650 233 151 0 99 chr2R 8534220 8534301 -12612407 + T-rich Low_complexity Low_complexity 3 75 0 1 650 24 32 0 0 chr2R 8544001 8544032 -12602676 + AT_rich Low_complexity Low_complexity 1 31 0 1 650 240 111 0 0 chr2R 8546830 8546866 -12599842 + (ATATG)n Simple_repeat Simple_repeat 1 36 0 1 650 21 57 0 0 chr2R 8550249 8550284 -12596424 + AT_rich Low_complexity Low_complexity 1 35 0 1 650 22 0 0 0 chr2R 8551502 8551524 -12595184 + AT_rich Low_complexity Low_complexity 1 22 0 1 650 180 111 0 0 chr2R 8552228 8552255 -12594453 + (CATA)n Simple_repeat Simple_repeat 1 27 0 1 650 22 0 0 0 chr2R 8556708 8556730 -12589978 + AT_rich Low_complexity Low_complexity 1 22 0 1 650 234 110 0 145 chr2R 8558946 8559063 -12587645 + (ACTTG)n Simple_repeat Simple_repeat 2 101 0 1 650 192 40 0 0 chr2R 8562257 8562282 -12584426 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 650 23 0 0 0 chr2R 8565678 8565701 -12581007 + AT_rich Low_complexity Low_complexity 1 23 0 1 650 21 0 0 0 chr2R 8567425 8567446 -12579262 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 21 36 0 0 chr2R 8570990 8571018 -12575690 + AT_rich Low_complexity Low_complexity 1 28 0 1 650 209 222 0 60 chr2R 8574684 8574751 -12571957 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1 650 228 67 0 0 chr2R 8580862 8580892 -12565816 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 650 21 0 0 0 chr2R 8584184 8584205 -12562503 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 24 53 0 0 chr2R 8587245 8587283 -12559425 + AT_rich Low_complexity Low_complexity 1 38 0 1 650 21 0 0 0 chr2R 8590214 8590235 -12556473 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 186 103 0 0 chr2R 8590557 8590586 -12556122 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 650 204 67 0 0 chr2R 8591670 8591700 -12555008 + (ACTCG)n Simple_repeat Simple_repeat 3 32 0 1 650 3986 5 0 0 chr2R 8595075 8595503 -12551205 + ROO_LTR LTR Pao 1 428 0 1 650 53554 1 2 2 chr2R 8595503 8601438 -12545270 + ROO_I LTR Pao 1 5936 -2320 1 650 13710 1 1 0 chr2R 8601438 8602955 -12543753 + ROO_I LTR Pao 6738 8256 0 1 650 3986 5 0 0 chr2R 8602955 8603383 -12543325 + ROO_LTR LTR Pao 1 428 0 1 650 21 57 0 0 chr2R 8603504 8603539 -12543169 + AT_rich Low_complexity Low_complexity 1 35 0 1 650 201 39 0 0 chr2R 8603782 8603808 -12542900 + (TTGGGG)n Simple_repeat Simple_repeat 3 28 0 1 650 23 0 0 0 chr2R 8607329 8607352 -12539356 + AT_rich Low_complexity Low_complexity 1 23 0 1 650 203 138 0 0 chr2R 8611193 8611222 -12535486 + (CGAG)n Simple_repeat Simple_repeat 1 29 0 1 650 31 0 0 0 chr2R 8615247 8615278 -12531430 + AT_rich Low_complexity Low_complexity 1 31 0 1 650 210 229 0 0 chr2R 8615502 8615550 -12531158 + (TGGG)n Simple_repeat Simple_repeat 1 48 0 1 650 23 54 0 0 chr2R 8617786 8617823 -12528885 + AT_rich Low_complexity Low_complexity 1 37 0 1 650 227 281 0 0 chr2R 8618328 8618392 -12528316 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 1 650 280 238 12 0 chr2R 8623804 8623884 -12522824 - ROO_I LTR Pao -7503 753 673 1 650 23 54 0 0 chr2R 8625528 8625565 -12521143 + AT_rich Low_complexity Low_complexity 1 37 0 1 650 201 196 0 0 chr2R 8625760 8625806 -12520902 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 650 201 39 0 0 chr2R 8626031 8626057 -12520651 + (TCCA)n Simple_repeat Simple_repeat 4 29 0 1 650 216 135 0 0 chr2R 8627810 8627847 -12518861 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 650 43 64 0 0 chr2R 8627972 8628050 -12518658 + AT_rich Low_complexity Low_complexity 1 78 0 1 650 267 54 0 0 chr2R 8629560 8629597 -12517111 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1 650 240 208 0 0 chr2R 8637929 8637982 -12508726 + CT-rich Low_complexity Low_complexity 2 54 0 1 650 189 107 0 0 chr2R 8638022 8638050 -12508658 + (CAG)n Simple_repeat Simple_repeat 1 28 0 1 650 272 102 0 20 chr2R 8638696 8638746 -12507962 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 650 23 0 0 0 chr2R 8640700 8640723 -12505985 + AT_rich Low_complexity Low_complexity 1 23 0 1 650 21 0 0 0 chr2R 8648532 8648553 -12498155 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 21 36 0 0 chr2R 8649394 8649422 -12497286 + AT_rich Low_complexity Low_complexity 1 28 0 1 651 24 32 0 0 chr2R 8651211 8651242 -12495466 + AT_rich Low_complexity Low_complexity 1 31 0 1 651 276 189 0 0 chr2R 8653748 8653822 -12492886 + (CTCA)n Simple_repeat Simple_repeat 2 75 0 1 651 229 131 0 21 chr2R 8655671 8655718 -12490990 + (CTG)n Simple_repeat Simple_repeat 2 47 0 1 651 28 48 0 0 chr2R 8657046 8657088 -12489620 + AT_rich Low_complexity Low_complexity 1 42 0 1 651 23 33 0 0 chr2R 8659229 8659259 -12487449 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 534 122 0 0 chr2R 8659283 8659381 -12487327 + (TGGA)n Simple_repeat Simple_repeat 3 100 0 1 651 188 67 0 32 chr2R 8662298 8662329 -12484379 + (GTTTG)n Simple_repeat Simple_repeat 5 34 0 1 651 201 94 0 0 chr2R 8662453 8662485 -12484223 + (T)n Simple_repeat Simple_repeat 1 32 0 1 651 303 85 0 0 chr2R 8662582 8662629 -12484079 + (T)n Simple_repeat Simple_repeat 1 47 0 1 651 213 237 13 13 chr2R 8664497 8664574 -12482134 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 651 198 103 0 0 chr2R 8664713 8664742 -12481966 + (CAG)n Simple_repeat Simple_repeat 2 30 0 1 651 251 38 75 0 chr2R 8665353 8665406 -12481302 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 651 23 0 0 0 chr2R 8665412 8665435 -12481273 + AT_rich Low_complexity Low_complexity 1 23 0 1 651 216 0 0 0 chr2R 8670515 8670539 -12476169 + (T)n Simple_repeat Simple_repeat 1 24 0 1 651 201 39 0 0 chr2R 8674790 8674816 -12471892 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 651 4022 0 0 0 chr2R 8676854 8677282 -12469426 - ROO_LTR LTR Pao 0 428 1 1 651 13812 0 1 0 chr2R 8677282 8678799 -12467909 - ROO_I LTR Pao 0 8256 6738 1 651 54141 0 1 0 chr2R 8678799 8684731 -12461977 - ROO_I LTR Pao -2320 5936 1 1 651 4022 0 0 0 chr2R 8684731 8685159 -12461549 - ROO_LTR LTR Pao 0 428 1 1 651 198 171 0 0 chr2R 8686224 8686265 -12460443 + (TTGGGG)n Simple_repeat Simple_repeat 1 41 0 1 651 219 69 0 0 chr2R 8688340 8688369 -12458339 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1 651 23 54 0 0 chr2R 8690956 8690993 -12455715 + AT_rich Low_complexity Low_complexity 1 37 0 1 651 38 51 0 0 chr2R 8697173 8697232 -12449476 + AT_rich Low_complexity Low_complexity 1 59 0 1 651 259 233 11 22 chr2R 8697908 8698000 -12448708 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 1 651 33 0 0 0 chr2R 8701077 8701110 -12445598 + AT_rich Low_complexity Low_complexity 1 33 0 1 651 204 40 0 0 chr2R 8704670 8704695 -12442013 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 1 651 22 56 0 0 chr2R 8704793 8704829 -12441879 + AT_rich Low_complexity Low_complexity 1 36 0 1 651 27 0 0 0 chr2R 8706381 8706408 -12440300 + AT_rich Low_complexity Low_complexity 1 27 0 1 651 46519 5 0 0 chr2R 8707005 8712017 -12434691 + LINEJ1_DM LINE Jockey 7 5018 -2 1 651 198 0 0 0 chr2R 8712244 8712266 -12434442 + (TTG)n Simple_repeat Simple_repeat 1 22 0 1 651 180 0 0 0 chr2R 8714626 8714646 -12432062 + (TATATG)n Simple_repeat Simple_repeat 6 25 0 1 651 26 0 0 0 chr2R 8715844 8715870 -12430838 + AT_rich Low_complexity Low_complexity 1 26 0 1 651 25 99 0 0 chr2R 8715935 8716016 -12430692 + AT_rich Low_complexity Low_complexity 1 81 0 1 651 21 36 0 0 chr2R 8719072 8719100 -12427608 + AT_rich Low_complexity Low_complexity 1 28 0 1 651 21 0 0 0 chr2R 8720527 8720548 -12426160 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 29 0 0 0 chr2R 8723556 8723585 -12423123 + AT_rich Low_complexity Low_complexity 1 29 0 1 651 218 95 24 0 chr2R 8726991 8727033 -12419675 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 651 24 53 0 0 chr2R 8737885 8737923 -12408785 + AT_rich Low_complexity Low_complexity 1 38 0 1 651 30 0 0 0 chr2R 8738107 8738137 -12408571 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 29 28 0 0 chr2R 8740384 8740420 -12406288 + AT_rich Low_complexity Low_complexity 1 36 0 1 651 24 0 0 0 chr2R 8742082 8742106 -12404602 + AT_rich Low_complexity Low_complexity 1 24 0 1 651 22 35 0 0 chr2R 8743441 8743470 -12403238 + AT_rich Low_complexity Low_complexity 1 29 0 1 651 33 0 0 0 chr2R 8743637 8743670 -12403038 + AT_rich Low_complexity Low_complexity 1 33 0 1 651 22 35 0 0 chr2R 8744766 8744795 -12401913 + AT_rich Low_complexity Low_complexity 1 29 0 1 651 29 28 0 0 chr2R 8747045 8747081 -12399627 + AT_rich Low_complexity Low_complexity 1 36 0 1 651 24 0 0 0 chr2R 8748751 8748775 -12397933 + AT_rich Low_complexity Low_complexity 1 24 0 1 651 26 30 0 0 chr2R 8749689 8749722 -12396986 + AT_rich Low_complexity Low_complexity 1 33 0 1 651 26 50 0 0 chr2R 8749789 8749829 -12396879 + AT_rich Low_complexity Low_complexity 1 40 0 1 651 3870 4 146 0 chr2R 8749834 8750321 -12396387 + ACCORD_LTR LTR Gypsy 1 558 0 1 651 4966 14 11 10 chr2R 8750321 8751340 -12395368 + ACCORD_I LTR Gypsy 1 778 -5510 1 651 29676 2 0 0 chr2R 8751317 8754572 -12392136 + ACCORD_I LTR Gypsy 3035 6288 0 1 651 3870 4 146 0 chr2R 8754572 8755059 -12391649 + ACCORD_LTR LTR Gypsy 1 558 0 1 651 36 0 0 0 chr2R 8755119 8755155 -12391553 + AT_rich Low_complexity Low_complexity 1 36 0 1 651 22 80 0 0 chr2R 8757401 8757451 -12389257 + AT_rich Low_complexity Low_complexity 1 50 0 1 651 23 68 0 0 chr2R 8757596 8757640 -12389068 + AT_rich Low_complexity Low_complexity 1 44 0 1 651 202 216 0 0 chr2R 8759616 8759653 -12387055 + (TATATG)n Simple_repeat Simple_repeat 1 37 0 1 651 27 0 0 0 chr2R 8760083 8760110 -12386598 + AT_rich Low_complexity Low_complexity 1 27 0 1 651 225 0 0 0 chr2R 8760200 8760225 -12386483 + (TATG)n Simple_repeat Simple_repeat 3 27 0 1 651 29 0 0 0 chr2R 8764838 8764867 -12381841 + AT_rich Low_complexity Low_complexity 1 29 0 1 651 201 39 0 0 chr2R 8774763 8774789 -12371919 + (ATTCG)n Simple_repeat Simple_repeat 3 28 0 1 651 189 0 0 0 chr2R 8776913 8776934 -12369774 + (CAGC)n Simple_repeat Simple_repeat 3 23 0 1 651 183 204 0 0 chr2R 8779361 8779405 -12367303 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 651 228 182 0 0 chr2R 8781698 8781742 -12364966 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 652 207 138 16 49 chr2R 8782899 8782960 -12363748 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 1 652 288 91 0 0 chr2R 8783148 8783192 -12363516 + (CCGAA)n Simple_repeat Simple_repeat 2 45 0 1 652 24 53 0 0 chr2R 8783599 8783637 -12363071 + AT_rich Low_complexity Low_complexity 1 38 0 1 652 192 185 0 0 chr2R 8784150 8784204 -12362504 + (CAT)n Simple_repeat Simple_repeat 1 54 0 1 652 191 125 0 24 chr2R 8786609 8786650 -12360058 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 652 217 241 0 0 chr2R 8786814 8786872 -12359836 + A-rich Low_complexity Low_complexity 1 58 0 1 652 222 91 0 0 chr2R 8787145 8787178 -12359530 + (CGAAA)n Simple_repeat Simple_repeat 3 35 0 1 652 192 97 0 0 chr2R 8787571 8787602 -12359106 + (T)n Simple_repeat Simple_repeat 1 31 0 1 652 239 234 141 0 chr2R 8789753 8789817 -12356891 + DOC4_DM LINE Jockey 1505 1577 -1214 1 652 224 208 0 0 chr2R 8791419 8791467 -12355241 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 652 23 54 0 0 chr2R 8794930 8794967 -12351741 + AT_rich Low_complexity Low_complexity 1 37 0 1 652 278 26 26 0 chr2R 8800662 8800701 -12346007 + (TTAAA)n Simple_repeat Simple_repeat 3 42 0 1 652 270 0 0 0 chr2R 8801195 8801225 -12345483 + (CGGT)n Simple_repeat Simple_repeat 2 31 0 1 652 300 53 0 0 chr2R 8802178 8802216 -12344492 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 652 186 143 0 0 chr2R 8802593 8802628 -12344080 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 652 21 57 0 0 chr2R 8803118 8803153 -12343555 + AT_rich Low_complexity Low_complexity 1 35 0 1 652 214 234 0 0 chr2R 8806155 8806202 -12340506 + (CGG)n Simple_repeat Simple_repeat 3 49 0 1 652 267 79 0 0 chr2R 8813795 8813833 -12332875 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1 652 192 77 0 0 chr2R 8815989 8816015 -12330693 + (GCTG)n Simple_repeat Simple_repeat 2 27 0 1 652 210 105 0 0 chr2R 8816592 8816630 -12330078 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 652 21 36 0 0 chr2R 8824224 8824252 -12322456 + AT_rich Low_complexity Low_complexity 1 28 0 1 652 21 0 0 0 chr2R 8831991 8832012 -12314696 + AT_rich Low_complexity Low_complexity 1 21 0 1 652 204 97 0 0 chr2R 8833746 8833777 -12312931 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 652 180 77 0 0 chr2R 8836861 8836887 -12309821 + (TGG)n Simple_repeat Simple_repeat 2 27 0 1 652 22 35 0 0 chr2R 8839024 8839053 -12307655 + AT_rich Low_complexity Low_complexity 1 29 0 1 652 34 0 0 0 chr2R 8844040 8844074 -12302634 + AT_rich Low_complexity Low_complexity 1 34 0 1 652 247 262 0 15 chr2R 8846248 8846314 -12300394 + GA-rich Low_complexity Low_complexity 2 66 0 1 652 21 71 0 0 chr2R 8846792 8846834 -12299874 + AT_rich Low_complexity Low_complexity 1 42 0 1 652 39 38 0 0 chr2R 8846874 8846927 -12299781 + AT_rich Low_complexity Low_complexity 1 53 0 1 652 243 61 0 0 chr2R 8847666 8847699 -12299009 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 652 306 115 0 0 chr2R 8848789 8848841 -12297867 + (CACAC)n Simple_repeat Simple_repeat 3 54 0 1 652 189 0 0 0 chr2R 8852867 8852888 -12293820 + (CTA)n Simple_repeat Simple_repeat 1 21 0 1 652 200 222 18 18 chr2R 8858397 8858452 -12288256 + (TGG)n Simple_repeat Simple_repeat 1 55 0 1 652 189 175 0 0 chr2R 8859230 8859270 -12287438 + A-rich Low_complexity Low_complexity 1 40 0 1 652 234 0 0 0 chr2R 8862294 8862320 -12284388 + (A)n Simple_repeat Simple_repeat 1 26 0 1 652 219 69 0 0 chr2R 8863209 8863238 -12283470 + (GTTTG)n Simple_repeat Simple_repeat 1 29 0 1 652 204 154 0 0 chr2R 8865075 8865127 -12281581 + GA-rich Low_complexity Low_complexity 2 53 0 1 652 192 125 0 0 chr2R 8865218 8865250 -12281458 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 652 318 194 0 0 chr2R 8865363 8865435 -12281273 + (TTG)n Simple_repeat Simple_repeat 2 73 0 1 652 252 315 0 26 chr2R 8865520 8865634 -12281074 + (TTG)n Simple_repeat Simple_repeat 1 111 0 1 652 209 182 18 0 chr2R 8867069 8867124 -12279584 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 652 201 243 42 28 chr2R 8867695 8867767 -12278941 + (CACTT)n Simple_repeat Simple_repeat 3 75 0 1 652 23 0 0 0 chr2R 8867978 8868001 -12278707 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 24 67 0 0 chr2R 8869420 8869465 -12277243 + AT_rich Low_complexity Low_complexity 1 45 0 1 652 28 0 0 0 chr2R 8869594 8869622 -12277086 + AT_rich Low_complexity Low_complexity 1 28 0 1 652 192 40 0 0 chr2R 8870156 8870181 -12276527 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1 652 23 33 0 0 chr2R 8870527 8870557 -12276151 + AT_rich Low_complexity Low_complexity 1 30 0 1 652 35 0 0 0 chr2R 8872687 8872722 -12273986 + AT_rich Low_complexity Low_complexity 1 35 0 1 652 237 200 0 35 chr2R 8873121 8873178 -12273530 + (CATA)n Simple_repeat Simple_repeat 4 58 0 1 652 24 53 0 0 chr2R 8874211 8874249 -12272459 + AT_rich Low_complexity Low_complexity 1 38 0 1 652 33 0 0 0 chr2R 8879113 8879146 -12267562 + AT_rich Low_complexity Low_complexity 1 33 0 1 652 267 161 0 0 chr2R 8879344 8879400 -12267308 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 652 24 67 0 0 chr2R 8881032 8881077 -12265631 + AT_rich Low_complexity Low_complexity 1 45 0 1 652 21 0 0 0 chr2R 8881932 8881953 -12264755 + AT_rich Low_complexity Low_complexity 1 21 0 1 652 413 179 200 0 chr2R 8882341 8882436 -12264272 - DNAREP1_DM LINE Penelope -42 552 439 1 652 180 111 0 0 chr2R 8886523 8886550 -12260158 + (ATG)n Simple_repeat Simple_repeat 1 27 0 1 652 299 153 12 0 chr2R 8889575 8889660 -12257048 + ROO_I LTR Pao 647 732 -7524 1 652 227 297 53 26 chr2R 8890807 8890921 -12255787 + ROO_I LTR Pao 631 747 -7509 1 652 498 125 0 0 chr2R 8891004 8891084 -12255624 + (CAA)n Simple_repeat Simple_repeat 1 80 0 1 652 189 0 0 0 chr2R 8891503 8891524 -12255184 + (CAG)n Simple_repeat Simple_repeat 2 22 0 1 652 192 125 0 0 chr2R 8892580 8892612 -12254096 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 652 216 213 49 0 chr2R 8893090 8893151 -12253557 + T-rich Low_complexity Low_complexity 3 66 0 1 652 228 211 0 0 chr2R 8894361 8894432 -12252276 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 652 204 111 0 0 chr2R 8895318 8895354 -12251354 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 652 240 235 0 19 chr2R 8896249 8896301 -12250407 + (TATG)n Simple_repeat Simple_repeat 1 51 0 1 652 23 54 0 0 chr2R 8899594 8899631 -12247077 + AT_rich Low_complexity Low_complexity 1 37 0 1 652 22 0 0 0 chr2R 8902794 8902816 -12243892 + AT_rich Low_complexity Low_complexity 1 22 0 1 652 24 0 0 0 chr2R 8904130 8904154 -12242554 + AT_rich Low_complexity Low_complexity 1 24 0 1 652 23 0 0 0 chr2R 8905267 8905290 -12241418 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 180 111 0 0 chr2R 8906563 8906590 -12240118 + (CATA)n Simple_repeat Simple_repeat 4 30 0 1 652 239 54 27 0 chr2R 8906757 8906794 -12239914 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1 652 186 171 0 0 chr2R 8906870 8906911 -12239797 + (GAGTG)n Simple_repeat Simple_repeat 5 45 0 1 652 201 29 0 81 chr2R 8911443 8911480 -12235228 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1 652 26 30 0 0 chr2R 8912163 8912196 -12234512 + AT_rich Low_complexity Low_complexity 1 33 0 1 652 216 210 36 24 chr2R 8912770 8912853 -12233855 + T-rich Low_complexity Low_complexity 1 84 0 1 653 25 51 0 0 chr2R 8915225 8915264 -12231444 + AT_rich Low_complexity Low_complexity 1 39 0 1 653 402 147 0 0 chr2R 8915815 8915883 -12230825 + (TCCA)n Simple_repeat Simple_repeat 2 69 0 1 653 234 0 0 0 chr2R 8917044 8917070 -12229638 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 653 230 148 19 0 chr2R 8917294 8917348 -12229360 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 653 210 282 0 0 chr2R 8917450 8917528 -12229180 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 653 222 105 0 0 chr2R 8918692 8918730 -12227978 + (CATCC)n Simple_repeat Simple_repeat 1 38 0 1 653 297 155 0 0 chr2R 8919846 8919904 -12226804 + (TTG)n Simple_repeat Simple_repeat 3 60 0 1 653 258 116 0 0 chr2R 8920108 8920151 -12226557 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1 653 321 129 100 56 chr2R 8924888 8924978 -12221730 + DNAREP1_DM LINE Penelope 222 315 -279 1 653 25 0 0 0 chr2R 8926853 8926878 -12219830 + AT_rich Low_complexity Low_complexity 1 25 0 1 653 21 0 0 0 chr2R 8927709 8927730 -12218978 + AT_rich Low_complexity Low_complexity 1 21 0 1 653 412 123 0 15 chr2R 8928496 8928562 -12218146 + DMRP1 Unknown Unknown 37 101 -245 1 653 652 165 201 4 chr2R 8928615 8928876 -12217832 + DNAREP1_DM LINE Penelope 15 327 -267 1 653 192 40 0 0 chr2R 8928973 8928998 -12217710 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 653 23 0 0 0 chr2R 8929046 8929069 -12217639 + AT_rich Low_complexity Low_complexity 1 23 0 1 653 27 49 0 0 chr2R 8931151 8931192 -12215516 + AT_rich Low_complexity Low_complexity 1 41 0 1 653 198 67 43 22 chr2R 8931520 8931566 -12215142 + (CCA)n Simple_repeat Simple_repeat 2 48 0 1 653 27 49 0 0 chr2R 8932044 8932085 -12214623 + AT_rich Low_complexity Low_complexity 1 41 0 1 653 225 0 0 0 chr2R 8932704 8932729 -12213979 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 653 22 0 0 0 chr2R 8936628 8936650 -12210058 + AT_rich Low_complexity Low_complexity 1 22 0 1 653 26 30 0 0 chr2R 8938169 8938202 -12208506 + AT_rich Low_complexity Low_complexity 1 33 0 1 653 254 188 59 0 chr2R 8939382 8939467 -12207241 - ROO_I LTR Pao -7523 733 644 1 653 231 175 0 0 chr2R 8943286 8943343 -12203365 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 653 52 17 0 0 chr2R 8946133 8946192 -12200516 + AT_rich Low_complexity Low_complexity 1 59 0 1 653 227 204 0 0 chr2R 8947960 8948009 -12198699 + A-rich Low_complexity Low_complexity 1 49 0 1 653 202 216 0 0 chr2R 8948127 8948178 -12198530 + (CAG)n Simple_repeat Simple_repeat 1 51 0 1 653 210 150 0 0 chr2R 8948495 8948535 -12198173 + (CTG)n Simple_repeat Simple_repeat 2 41 0 1 653 21 36 0 0 chr2R 8954334 8954362 -12192346 + AT_rich Low_complexity Low_complexity 1 28 0 1 653 258 136 0 0 chr2R 8967262 8967306 -12179402 + (TTG)n Simple_repeat Simple_repeat 1 44 0 1 653 27 29 0 0 chr2R 8967475 8967509 -12179199 + AT_rich Low_complexity Low_complexity 1 34 0 1 653 227 182 0 0 chr2R 8968852 8968896 -12177812 + (CGAAA)n Simple_repeat Simple_repeat 1 44 0 1 653 209 270 16 0 chr2R 8969632 8969695 -12177013 + (CGAAA)n Simple_repeat Simple_repeat 2 65 0 1 653 297 109 0 0 chr2R 8973742 8973788 -12172920 + (TGGA)n Simple_repeat Simple_repeat 2 47 0 1 653 29 0 0 0 chr2R 8976323 8976352 -12170356 + AT_rich Low_complexity Low_complexity 1 29 0 1 653 209 322 0 0 chr2R 8979182 8979269 -12167439 + A-rich Low_complexity Low_complexity 1 87 0 1 653 208 185 18 36 chr2R 8979391 8979447 -12167261 + G-rich Low_complexity Low_complexity 5 59 0 1 653 204 97 0 0 chr2R 8980376 8980407 -12166301 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 653 27 0 0 0 chr2R 8982605 8982632 -12164076 + AT_rich Low_complexity Low_complexity 1 27 0 1 653 273 151 0 0 chr2R 8983707 8983760 -12162948 + (GCTG)n Simple_repeat Simple_repeat 4 56 0 1 653 29 60 0 0 chr2R 8984355 8984405 -12162303 + AT_rich Low_complexity Low_complexity 1 50 0 1 653 297 109 0 0 chr2R 8988410 8988456 -12158252 + (TCCA)n Simple_repeat Simple_repeat 2 47 0 1 653 21 36 0 0 chr2R 9004278 9004306 -12142402 + AT_rich Low_complexity Low_complexity 1 28 0 1 653 22 0 0 0 chr2R 9010363 9010385 -12136323 + AT_rich Low_complexity Low_complexity 1 22 0 1 653 21 57 0 0 chr2R 9013247 9013282 -12133426 + AT_rich Low_complexity Low_complexity 1 35 0 1 653 43484 2 0 0 chr2R 9024401 9029127 -12117581 - DOC LINE Jockey 0 4725 2 1 653 185 163 0 20 chr2R 9032970 9033020 -12113688 + T-rich Low_complexity Low_complexity 4 52 0 1 653 352 113 0 0 chr2R 9043487 9043540 -12103168 + DNAREP1_DM LINE Penelope 40 92 -502 1 654 276 324 0 0 chr2R 9047315 9047417 -12099291 + GA-rich Low_complexity Low_complexity 1 102 0 1 654 231 278 0 0 chr2R 9051245 9051342 -12095366 + CT-rich Low_complexity Low_complexity 2 98 0 1 654 234 105 0 0 chr2R 9054404 9054442 -12092266 + (AAGTG)n Simple_repeat Simple_repeat 4 41 0 1 654 24 0 0 0 chr2R 9055723 9055747 -12090961 + AT_rich Low_complexity Low_complexity 1 24 0 1 654 31 82 0 0 chr2R 9059702 9059775 -12086933 + AT_rich Low_complexity Low_complexity 1 73 0 1 654 35 41 0 0 chr2R 9063603 9063652 -12083056 + AT_rich Low_complexity Low_complexity 1 49 0 1 654 182 62 31 0 chr2R 9064024 9064056 -12082652 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 654 381 93 0 0 chr2R 9064968 9065022 -12081686 + (CTG)n Simple_repeat Simple_repeat 1 54 0 1 654 297 75 0 0 chr2R 9066015 9066055 -12080653 + (CTG)n Simple_repeat Simple_repeat 1 40 0 1 654 273 257 0 0 chr2R 9066187 9066257 -12080451 + (CTG)n Simple_repeat Simple_repeat 3 72 0 1 654 221 279 0 14 chr2R 9066374 9066443 -12080265 + (TTCGGG)n Simple_repeat Simple_repeat 4 71 0 1 654 240 111 0 0 chr2R 9066519 9066564 -12080144 + (TTG)n Simple_repeat Simple_repeat 3 47 0 1 654 26 30 0 0 chr2R 9067108 9067141 -12079567 + AT_rich Low_complexity Low_complexity 1 33 0 1 654 297 118 0 0 chr2R 9067668 9067719 -12078989 + (ATTG)n Simple_repeat Simple_repeat 1 51 0 1 654 224 256 0 37 chr2R 9068309 9068390 -12078318 + (CAGAGA)n Simple_repeat Simple_repeat 6 83 0 1 654 240 224 0 0 chr2R 9068681 9068766 -12077942 - ROO_I LTR Pao -7528 728 644 1 654 237 65 0 0 chr2R 9068941 9068972 -12077736 + (CTG)n Simple_repeat Simple_repeat 2 32 0 1 654 236 115 0 0 chr2R 9070603 9070655 -12076053 - ROO_I LTR Pao -7515 741 690 1 654 264 59 0 0 chr2R 9072303 9072337 -12074371 + (CTG)n Simple_repeat Simple_repeat 3 36 0 1 654 21 36 0 0 chr2R 9076099 9076127 -12070581 + AT_rich Low_complexity Low_complexity 1 28 0 1 654 227 255 0 0 chr2R 9076991 9077042 -12069666 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 654 235 206 16 16 chr2R 9077650 9077714 -12068994 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 654 201 243 0 0 chr2R 9079083 9079153 -12067555 + GA-rich Low_complexity Low_complexity 2 71 0 1 654 255 125 0 0 chr2R 9079290 9079330 -12067378 + (CAA)n Simple_repeat Simple_repeat 1 40 0 1 654 237 146 0 0 chr2R 9079629 9079677 -12067031 + (TTG)n Simple_repeat Simple_repeat 2 49 0 1 654 597 14 0 0 chr2R 9082380 9082450 -12064258 + (GCTG)n Simple_repeat Simple_repeat 3 72 0 1 654 229 274 0 0 chr2R 9084170 9084232 -12062476 - DNAREP1_DM LINE Penelope -102 492 431 1 654 23 33 0 0 chr2R 9086054 9086084 -12060624 + AT_rich Low_complexity Low_complexity 1 30 0 1 654 22 109 0 0 chr2R 9086197 9086289 -12060419 + AT_rich Low_complexity Low_complexity 1 92 0 1 654 22 0 0 0 chr2R 9094142 9094164 -12052544 + AT_rich Low_complexity Low_complexity 1 22 0 1 654 23 54 0 0 chr2R 9094301 9094338 -12052370 + AT_rich Low_complexity Low_complexity 1 37 0 1 654 21 0 0 0 chr2R 9098831 9098852 -12047856 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 21 0 0 0 chr2R 9099842 9099863 -12046845 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 24 0 0 0 chr2R 9099953 9099977 -12046731 + AT_rich Low_complexity Low_complexity 1 24 0 1 654 410 122 219 0 chr2R 9120246 9120328 -12026380 + DNAREP1_DM LINE Penelope 1 100 -494 1 654 21 57 0 0 chr2R 9122785 9122820 -12023888 + AT_rich Low_complexity Low_complexity 1 35 0 1 654 28 71 0 0 chr2R 9123143 9123199 -12023509 + AT_rich Low_complexity Low_complexity 1 56 0 1 654 22 35 0 0 chr2R 9123296 9123325 -12023383 + AT_rich Low_complexity Low_complexity 1 29 0 1 654 23 33 0 0 chr2R 9129558 9129588 -12017120 + AT_rich Low_complexity Low_complexity 1 30 0 1 654 186 43 0 0 chr2R 9129911 9129934 -12016774 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 654 25 31 0 0 chr2R 9133319 9133351 -12013357 + AT_rich Low_complexity Low_complexity 1 32 0 1 654 231 88 0 0 chr2R 9133884 9133918 -12012790 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 654 213 39 0 0 chr2R 9136251 9136277 -12010431 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 654 202 189 0 70 chr2R 9139116 9139173 -12007535 + T-rich Low_complexity Low_complexity 2 54 0 1 654 223 192 12 37 chr2R 9141754 9141835 -12004873 + T-rich Low_complexity Low_complexity 5 83 0 1 654 34 0 0 0 chr2R 9141928 9141962 -12004746 + AT_rich Low_complexity Low_complexity 1 34 0 1 654 28 29 0 0 chr2R 9143365 9143400 -12003308 + AT_rich Low_complexity Low_complexity 1 35 0 1 654 27 0 0 0 chr2R 9143519 9143546 -12003162 + AT_rich Low_complexity Low_complexity 1 27 0 1 654 21 36 0 0 chr2R 9146246 9146274 -12000434 + AT_rich Low_complexity Low_complexity 1 28 0 1 654 242 213 0 0 chr2R 9146348 9146395 -12000313 - DNAREP1_DM LINE Penelope -547 47 1 1 654 646 197 105 37 chr2R 9146987 9147177 -11999531 - DNAREP1_DM LINE Penelope -8 586 384 1 654 21 0 0 0 chr2R 9147192 9147213 -11999495 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 31 26 0 0 chr2R 9153744 9153782 -11992926 + AT_rich Low_complexity Low_complexity 1 38 0 1 654 198 71 0 0 chr2R 9156174 9156202 -11990506 + (CTG)n Simple_repeat Simple_repeat 3 30 0 1 654 22 35 0 0 chr2R 9157605 9157634 -11989074 + AT_rich Low_complexity Low_complexity 1 29 0 1 654 186 143 0 0 chr2R 9160082 9160117 -11986591 + (A)n Simple_repeat Simple_repeat 1 35 0 1 654 189 94 0 0 chr2R 9164078 9164110 -11982598 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 654 187 152 21 21 chr2R 9164805 9164852 -11981856 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 654 22 88 0 0 chr2R 9165326 9165383 -11981325 + AT_rich Low_complexity Low_complexity 1 57 0 1 654 22 0 0 0 chr2R 9166336 9166358 -11980350 + AT_rich Low_complexity Low_complexity 1 22 0 1 654 22 35 0 0 chr2R 9166377 9166406 -11980302 + AT_rich Low_complexity Low_complexity 1 29 0 1 654 201 147 0 0 chr2R 9167972 9168006 -11978702 + (GCTTG)n Simple_repeat Simple_repeat 2 35 0 1 654 30 0 0 0 chr2R 9169479 9169509 -11977199 + AT_rich Low_complexity Low_complexity 1 30 0 1 654 24 0 0 0 chr2R 9170728 9170752 -11975956 + AT_rich Low_complexity Low_complexity 1 24 0 1 654 216 0 0 0 chr2R 9172164 9172188 -11974520 + (A)n Simple_repeat Simple_repeat 1 24 0 1 654 189 0 0 0 chr2R 9172848 9172869 -11973839 + (CTG)n Simple_repeat Simple_repeat 3 23 0 1 655 22 0 0 0 chr2R 9177696 9177718 -11968990 + AT_rich Low_complexity Low_complexity 1 22 0 1 655 24 0 0 0 chr2R 9181495 9181519 -11965189 + AT_rich Low_complexity Low_complexity 1 24 0 1 655 198 0 0 0 chr2R 9182151 9182173 -11964535 + (T)n Simple_repeat Simple_repeat 1 22 0 1 655 34 24 0 0 chr2R 9184846 9184887 -11961821 + AT_rich Low_complexity Low_complexity 1 41 0 1 655 264 59 0 0 chr2R 9186687 9186721 -11959987 + (CAT)n Simple_repeat Simple_repeat 1 34 0 1 655 24 32 0 0 chr2R 9188514 9188545 -11958163 + AT_rich Low_complexity Low_complexity 1 31 0 1 655 225 94 0 0 chr2R 9189553 9189585 -11957123 + (CAGC)n Simple_repeat Simple_repeat 4 35 0 1 655 225 65 0 0 chr2R 9191670 9191701 -11955007 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 655 192 77 0 0 chr2R 9191796 9191822 -11954886 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 655 198 0 0 0 chr2R 9192008 9192030 -11954678 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 655 248 197 49 0 chr2R 9193024 9193085 -11953623 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 655 408 135 0 0 chr2R 9193395 9193469 -11953239 + (ATG)n Simple_repeat Simple_repeat 3 76 0 1 655 192 125 0 0 chr2R 9193993 9194025 -11952683 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 655 25 0 0 0 chr2R 9195162 9195187 -11951521 + AT_rich Low_complexity Low_complexity 1 25 0 1 655 22 0 0 0 chr2R 9196057 9196079 -11950629 + AT_rich Low_complexity Low_complexity 1 22 0 1 655 219 36 0 0 chr2R 9196247 9196275 -11950433 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1 655 201 121 0 0 chr2R 9197532 9197565 -11949143 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 655 213 132 0 0 chr2R 9199986 9200024 -11946684 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 655 225 83 0 0 chr2R 9200647 9200683 -11946025 + (CTG)n Simple_repeat Simple_repeat 3 38 0 1 655 258 116 0 0 chr2R 9200757 9200800 -11945908 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 655 249 83 0 0 chr2R 9201324 9201360 -11945348 + (GTTTG)n Simple_repeat Simple_repeat 4 39 0 1 655 21 0 0 0 chr2R 9202341 9202362 -11944346 + AT_rich Low_complexity Low_complexity 1 21 0 1 655 305 82 20 0 chr2R 9203056 9203105 -11943603 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 655 231 125 0 0 chr2R 9203885 9203925 -11942783 + (TCCG)n Simple_repeat Simple_repeat 1 40 0 1 655 204 97 0 0 chr2R 9204152 9204183 -11942525 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 655 192 77 0 0 chr2R 9204310 9204336 -11942372 + (CCTG)n Simple_repeat Simple_repeat 4 29 0 1 655 236 180 0 0 chr2R 9207397 9207447 -11939261 + (CAG)n Simple_repeat Simple_repeat 2 51 0 1 655 225 0 0 0 chr2R 9209147 9209172 -11937536 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 655 23 0 0 0 chr2R 9209714 9209737 -11936971 + AT_rich Low_complexity Low_complexity 1 23 0 1 655 299 295 0 0 chr2R 9209984 9210062 -11936646 + (CCA)n Simple_repeat Simple_repeat 3 80 0 1 655 240 149 0 0 chr2R 9210167 9210214 -11936494 + (TTG)n Simple_repeat Simple_repeat 1 47 0 1 655 240 111 0 0 chr2R 9210786 9210822 -11935886 + (TGAG)n Simple_repeat Simple_repeat 1 36 0 1 655 226 323 10 10 chr2R 9212120 9212220 -11934488 + (CAGA)n Simple_repeat Simple_repeat 4 103 0 1 655 189 74 0 0 chr2R 9213474 9213501 -11933207 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 655 183 80 0 0 chr2R 9215029 9215054 -11931654 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 655 24 0 0 0 chr2R 9216204 9216228 -11930480 + AT_rich Low_complexity Low_complexity 1 24 0 1 655 183 42 0 0 chr2R 9217090 9217114 -11929594 + (CAAT)n Simple_repeat Simple_repeat 3 26 0 1 655 291 164 0 0 chr2R 9217887 9217948 -11928760 + (CTCTG)n Simple_repeat Simple_repeat 5 65 0 1 655 207 0 0 0 chr2R 9218414 9218437 -11928271 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 655 205 162 0 0 chr2R 9218624 9218661 -11928047 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 655 204 135 0 0 chr2R 9218857 9218894 -11927814 + (CTG)n Simple_repeat Simple_repeat 3 39 0 1 655 210 174 0 0 chr2R 9221341 9221387 -11925321 + (CCGAA)n Simple_repeat Simple_repeat 4 49 0 1 655 198 71 0 0 chr2R 9222348 9222376 -11924332 + (AGTTG)n Simple_repeat Simple_repeat 1 28 0 1 655 237 182 0 0 chr2R 9222659 9222714 -11923994 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 655 180 77 0 0 chr2R 9224185 9224211 -11922497 + (TTCTCC)n Simple_repeat Simple_repeat 6 31 0 1 655 212 234 0 0 chr2R 9224777 9224824 -11921884 + (CTCCG)n Simple_repeat Simple_repeat 4 50 0 1 655 201 154 0 0 chr2R 9227676 9227715 -11918993 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 655 29 28 0 0 chr2R 9228085 9228121 -11918587 + AT_rich Low_complexity Low_complexity 1 36 0 1 655 225 94 0 0 chr2R 9228421 9228453 -11918255 + (CGA)n Simple_repeat Simple_repeat 1 32 0 1 655 198 0 0 0 chr2R 9231402 9231424 -11915284 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 655 216 0 0 0 chr2R 9232232 9232256 -11914452 + (CAGC)n Simple_repeat Simple_repeat 3 26 0 1 655 198 71 0 0 chr2R 9232655 9232683 -11914025 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 655 180 0 0 0 chr2R 9235433 9235453 -11911255 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 655 231 61 0 0 chr2R 9235749 9235782 -11910926 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 655 252 143 0 0 chr2R 9242219 9242275 -11904433 + (GGATG)n Simple_repeat Simple_repeat 1 56 0 1 655 211 184 0 0 chr2R 9244311 9244349 -11902359 + (CCA)n Simple_repeat Simple_repeat 2 39 0 1 655 246 81 0 0 chr2R 9245935 9245972 -11900736 + (CGA)n Simple_repeat Simple_repeat 2 38 0 1 655 26 0 0 0 chr2R 9248891 9248917 -11897791 + AT_rich Low_complexity Low_complexity 1 26 0 1 655 216 0 0 0 chr2R 9249761 9249785 -11896923 + (T)n Simple_repeat Simple_repeat 1 24 0 1 655 189 0 0 0 chr2R 9250217 9250238 -11896470 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1 655 201 74 0 0 chr2R 9253094 9253121 -11893587 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 655 276 77 0 0 chr2R 9255010 9255049 -11891659 + (CAG)n Simple_repeat Simple_repeat 3 41 0 1 655 297 0 0 0 chr2R 9255658 9255691 -11891017 + (CCA)n Simple_repeat Simple_repeat 3 35 0 1 655 249 186 0 0 chr2R 9255829 9255899 -11890809 + (AACTG)n Simple_repeat Simple_repeat 2 71 0 1 655 192 40 0 0 chr2R 9256683 9256708 -11890000 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1 655 192 77 0 0 chr2R 9256891 9256917 -11889791 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 655 180 0 0 0 chr2R 9259418 9259438 -11887270 + (CAA)n Simple_repeat Simple_repeat 1 20 0 1 655 246 128 0 0 chr2R 9261497 9261536 -11885172 + (CGAGT)n Simple_repeat Simple_repeat 5 43 0 1 655 23 0 0 0 chr2R 9263166 9263189 -11883519 + AT_rich Low_complexity Low_complexity 1 23 0 1 655 210 143 0 0 chr2R 9267973 9268008 -11878700 + (TCCG)n Simple_repeat Simple_repeat 1 35 0 1 655 26 74 0 0 chr2R 9268380 9268434 -11878274 + AT_rich Low_complexity Low_complexity 1 54 0 1 655 26 50 0 0 chr2R 9268507 9268547 -11878161 + AT_rich Low_complexity Low_complexity 1 40 0 1 655 236 231 39 0 chr2R 9269597 9269675 -11877033 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 655 198 71 0 0 chr2R 9269832 9269860 -11876848 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 655 220 208 0 0 chr2R 9271123 9271176 -11875532 + (CATTC)n Simple_repeat Simple_repeat 5 57 0 1 655 215 231 0 15 chr2R 9271784 9271850 -11874858 + (CCCTAA)n Simple_repeat Simple_repeat 5 69 0 1 655 257 200 0 0 chr2R 9271785 9271830 -11874878 + C-rich Low_complexity Low_complexity 5 49 0 1 655 246 229 0 79 chr2R 9273037 9273113 -11873595 + DNAREP1_DM LINE Penelope 389 458 -136 1 655 180 0 0 0 chr2R 9277116 9277136 -11869572 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 655 43 71 0 0 chr2R 9280879 9280964 -11865744 + AT_rich Low_complexity Low_complexity 1 85 0 1 655 202 229 0 0 chr2R 9283020 9283068 -11863640 + A-rich Low_complexity Low_complexity 1 48 0 1 655 364 139 0 82 chr2R 9284100 9284210 -11862498 - ROO_I LTR Pao -7515 741 641 1 655 180 125 0 0 chr2R 9285744 9285776 -11860932 + (CTG)n Simple_repeat Simple_repeat 1 32 0 1 655 204 111 0 0 chr2R 9287542 9287578 -11859130 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 655 29 70 0 0 chr2R 9291747 9291804 -11854904 + AT_rich Low_complexity Low_complexity 1 57 0 1 655 29 0 0 0 chr2R 9293739 9293768 -11852940 + AT_rich Low_complexity Low_complexity 1 29 0 1 655 29 0 0 0 chr2R 9298466 9298495 -11848213 + AT_rich Low_complexity Low_complexity 1 29 0 1 655 30 0 0 0 chr2R 9305642 9305672 -11841036 + AT_rich Low_complexity Low_complexity 1 30 0 1 656 22 0 0 0 chr2R 9307776 9307798 -11838910 + AT_rich Low_complexity Low_complexity 1 22 0 1 656 26 0 0 0 chr2R 9313996 9314022 -11832686 + AT_rich Low_complexity Low_complexity 1 26 0 1 656 21 36 0 0 chr2R 9316851 9316879 -11829829 + AT_rich Low_complexity Low_complexity 1 28 0 1 656 23 33 0 0 chr2R 9316899 9316929 -11829779 + AT_rich Low_complexity Low_complexity 1 30 0 1 656 23 0 0 0 chr2R 9318058 9318081 -11828627 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 23 33 0 0 chr2R 9318113 9318143 -11828565 + AT_rich Low_complexity Low_complexity 1 30 0 1 656 25 31 0 0 chr2R 9318906 9318938 -11827770 + AT_rich Low_complexity Low_complexity 1 32 0 1 656 22 35 0 0 chr2R 9320348 9320377 -11826331 + AT_rich Low_complexity Low_complexity 1 29 0 1 656 21 0 0 0 chr2R 9320466 9320487 -11826221 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 613 109 257 6 chr2R 9325847 9326026 -11820682 + PROTOP_B DNA P 89 312 -841 1 656 29 47 0 0 chr2R 9326665 9326708 -11820000 + AT_rich Low_complexity Low_complexity 1 43 0 1 656 189 0 0 0 chr2R 9327295 9327316 -11819392 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 656 202 182 0 0 chr2R 9334887 9334920 -11811788 + (CTG)n Simple_repeat Simple_repeat 2 34 0 1 656 180 152 0 0 chr2R 9336423 9336456 -11810252 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 656 194 182 0 35 chr2R 9336760 9336817 -11809891 + (TATG)n Simple_repeat Simple_repeat 1 55 0 1 656 22 35 0 0 chr2R 9337342 9337371 -11809337 + AT_rich Low_complexity Low_complexity 1 29 0 1 656 21 0 0 0 chr2R 9341151 9341172 -11805536 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 192 111 0 0 chr2R 9348569 9348605 -11798103 + (A)n Simple_repeat Simple_repeat 1 36 0 1 656 282 29 0 0 chr2R 9349604 9349639 -11797069 + (GGA)n Simple_repeat Simple_repeat 1 35 0 1 656 264 77 0 0 chr2R 9350665 9350704 -11796004 + (CAGAC)n Simple_repeat Simple_repeat 2 40 0 1 656 21 0 0 0 chr2R 9351144 9351165 -11795543 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 231 36 0 0 chr2R 9351720 9351748 -11794960 + (CAAGC)n Simple_repeat Simple_repeat 3 30 0 1 656 201 321 0 0 chr2R 9353167 9353220 -11793488 + (CGAA)n Simple_repeat Simple_repeat 1 53 0 1 656 42 36 0 0 chr2R 9353506 9353562 -11793146 + AT_rich Low_complexity Low_complexity 1 56 0 1 656 180 0 0 0 chr2R 9354277 9354297 -11792411 + (A)n Simple_repeat Simple_repeat 1 20 0 1 656 318 67 0 0 chr2R 9356187 9356232 -11790476 + (TTCTG)n Simple_repeat Simple_repeat 1 45 0 1 656 273 178 0 0 chr2R 9356398 9356471 -11790237 + ROO_I LTR Pao 648 720 -7536 1 656 27 62 0 0 chr2R 9357244 9357292 -11789416 + AT_rich Low_complexity Low_complexity 1 48 0 1 656 204 40 0 0 chr2R 9359426 9359451 -11787257 + (TCCA)n Simple_repeat Simple_repeat 2 26 0 1 656 207 88 0 0 chr2R 9360737 9360771 -11785937 + (AGTTG)n Simple_repeat Simple_repeat 5 38 0 1 656 207 88 0 0 chr2R 9361199 9361233 -11785475 + (CCA)n Simple_repeat Simple_repeat 3 36 0 1 656 30 27 0 0 chr2R 9363695 9363732 -11782976 + AT_rich Low_complexity Low_complexity 1 37 0 1 656 22 0 0 0 chr2R 9365583 9365605 -11781103 + AT_rich Low_complexity Low_complexity 1 22 0 1 656 225 159 0 0 chr2R 9370327 9370371 -11776337 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 656 189 74 0 0 chr2R 9375955 9375982 -11770726 + (TGGG)n Simple_repeat Simple_repeat 2 28 0 1 656 194 62 0 30 chr2R 9378174 9378207 -11768501 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 656 25 31 0 0 chr2R 9383112 9383144 -11763564 + AT_rich Low_complexity Low_complexity 1 32 0 1 656 21 36 0 0 chr2R 9383674 9383702 -11763006 + AT_rich Low_complexity Low_complexity 1 28 0 1 656 192 77 0 0 chr2R 9388138 9388164 -11758544 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 656 186 118 0 0 chr2R 9388370 9388404 -11758304 + (CAGC)n Simple_repeat Simple_repeat 1 34 0 1 656 210 162 0 0 chr2R 9389499 9389536 -11757172 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 656 180 0 0 0 chr2R 9390092 9390112 -11756596 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 656 21 0 0 0 chr2R 9393726 9393747 -11752961 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 40 59 0 0 chr2R 9394939 9395007 -11751701 + AT_rich Low_complexity Low_complexity 1 68 0 1 656 180 0 0 0 chr2R 9401112 9401132 -11745576 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 656 206 245 0 0 chr2R 9405476 9405529 -11741179 + T-rich Low_complexity Low_complexity 1 53 0 1 656 25 0 0 0 chr2R 9405822 9405847 -11740861 + AT_rich Low_complexity Low_complexity 1 25 0 1 656 24 0 0 0 chr2R 9410859 9410883 -11735825 + AT_rich Low_complexity Low_complexity 1 24 0 1 656 21 0 0 0 chr2R 9416146 9416167 -11730541 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 22 35 0 0 chr2R 9417535 9417564 -11729144 + AT_rich Low_complexity Low_complexity 1 29 0 1 656 27 0 0 0 chr2R 9420106 9420133 -11726575 + AT_rich Low_complexity Low_complexity 1 27 0 1 656 30 45 0 0 chr2R 9423499 9423543 -11723165 + AT_rich Low_complexity Low_complexity 1 44 0 1 656 23 0 0 0 chr2R 9423782 9423805 -11722903 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 22 35 0 0 chr2R 9427623 9427652 -11719056 + AT_rich Low_complexity Low_complexity 1 29 0 1 656 21 0 0 0 chr2R 9429170 9429191 -11717517 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 186 43 0 0 chr2R 9435450 9435473 -11711235 + (CAATC)n Simple_repeat Simple_repeat 2 24 0 1 657 21 0 0 0 chr2R 9441367 9441388 -11705320 + AT_rich Low_complexity Low_complexity 1 21 0 1 657 213 175 0 0 chr2R 9445373 9445413 -11701295 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 657 454 100 143 0 chr2R 9452764 9452834 -11693874 + DNAREP1_DM LINE Penelope 438 517 -77 1 657 26 74 0 0 chr2R 9452885 9452939 -11693769 + AT_rich Low_complexity Low_complexity 1 54 0 1 657 21 36 0 0 chr2R 9463175 9463203 -11683505 + AT_rich Low_complexity Low_complexity 1 28 0 1 657 248 195 0 35 chr2R 9463650 9463735 -11682973 + ROO_I LTR Pao 648 729 -7527 1 657 267 103 0 0 chr2R 9463995 9464034 -11682674 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 657 23 33 0 0 chr2R 9464848 9464878 -11681830 + AT_rich Low_complexity Low_complexity 1 30 0 1 657 189 74 0 0 chr2R 9465477 9465504 -11681204 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 657 203 0 37 0 chr2R 9466370 9466397 -11680311 + (GGTTG)n Simple_repeat Simple_repeat 5 32 0 1 657 23 0 0 0 chr2R 9466975 9466998 -11679710 + AT_rich Low_complexity Low_complexity 1 23 0 1 657 189 0 0 0 chr2R 9468061 9468082 -11678626 + (T)n Simple_repeat Simple_repeat 1 21 0 1 657 2171 4 0 15 chr2R 9468082 9468347 -11678361 - LINEJ1_DM LINE Jockey 0 5020 4760 1 657 183 42 0 0 chr2R 9469764 9469788 -11676920 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 657 22 0 0 0 chr2R 9471360 9471382 -11675326 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 231 266 0 0 chr2R 9471711 9471775 -11674933 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 657 183 80 0 0 chr2R 9472332 9472357 -11674351 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 657 21 36 0 0 chr2R 9477926 9477954 -11668754 + AT_rich Low_complexity Low_complexity 1 28 0 1 657 249 146 0 0 chr2R 9478256 9478304 -11668404 + (CTG)n Simple_repeat Simple_repeat 1 48 0 1 657 505 115 10 10 chr2R 9478595 9478692 -11668016 + (CTG)n Simple_repeat Simple_repeat 3 99 0 1 657 224 231 0 0 chr2R 9480303 9480355 -11666353 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 657 189 0 0 0 chr2R 9480597 9480618 -11666090 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 657 224 218 18 0 chr2R 9483802 9483857 -11662851 + (CGA)n Simple_repeat Simple_repeat 2 57 0 1 657 230 277 0 15 chr2R 9487531 9487597 -11659111 + (CAG)n Simple_repeat Simple_repeat 1 65 0 1 657 218 304 0 0 chr2R 9487698 9487754 -11658954 + (TTCGGG)n Simple_repeat Simple_repeat 2 57 0 1 657 183 42 0 0 chr2R 9489069 9489093 -11657615 + (G)n Simple_repeat Simple_repeat 1 24 0 1 657 23 0 0 0 chr2R 9491192 9491215 -11655493 + AT_rich Low_complexity Low_complexity 1 23 0 1 657 183 80 0 0 chr2R 9493656 9493681 -11653027 + (TAG)n Simple_repeat Simple_repeat 2 26 0 1 657 25 0 0 0 chr2R 9493826 9493851 -11652857 + AT_rich Low_complexity Low_complexity 1 25 0 1 657 241 196 0 19 chr2R 9497173 9497225 -11649483 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1 657 216 179 0 0 chr2R 9497484 9497523 -11649185 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 657 204 97 0 0 chr2R 9497798 9497829 -11648879 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 657 22 35 0 0 chr2R 9500164 9500193 -11646515 + AT_rich Low_complexity Low_complexity 1 29 0 1 657 22 0 0 0 chr2R 9501676 9501698 -11645010 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 200 109 0 80 chr2R 9504885 9504935 -11641773 + A-rich Low_complexity Low_complexity 1 46 0 1 657 251 203 119 0 chr2R 9505448 9505507 -11641201 - DNAREP1_DM LINE Penelope -98 496 431 1 657 25 0 0 0 chr2R 9505684 9505709 -11640999 + AT_rich Low_complexity Low_complexity 1 25 0 1 657 21 0 0 0 chr2R 9506324 9506345 -11640363 + AT_rich Low_complexity Low_complexity 1 21 0 1 657 226 262 0 86 chr2R 9507153 9507270 -11639438 + (CAGAGA)n Simple_repeat Simple_repeat 1 107 0 1 657 238 258 0 0 chr2R 9507166 9507228 -11639480 + GA-rich Low_complexity Low_complexity 2 63 0 1 657 216 122 0 0 chr2R 9507706 9507747 -11638961 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 657 264 30 0 0 chr2R 9508811 9508844 -11637864 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1 657 204 125 0 0 chr2R 9508927 9508959 -11637749 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 657 186 143 0 0 chr2R 9509420 9509455 -11637253 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 657 183 42 0 0 chr2R 9509456 9509480 -11637228 + (A)n Simple_repeat Simple_repeat 1 24 0 1 657 459 92 0 0 chr2R 9509716 9509781 -11636927 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 657 180 163 0 0 chr2R 9511571 9511614 -11635094 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 657 198 71 0 0 chr2R 9512163 9512191 -11634517 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 657 186 167 0 0 chr2R 9512938 9512974 -11633734 + T-rich Low_complexity Low_complexity 1 36 0 1 657 293 0 27 0 chr2R 9514442 9514479 -11632229 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 657 225 119 0 0 chr2R 9515839 9515881 -11630827 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 657 189 121 0 0 chr2R 9516002 9516035 -11630673 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 657 21 0 0 0 chr2R 9516743 9516764 -11629944 + AT_rich Low_complexity Low_complexity 1 21 0 1 657 279 93 0 0 chr2R 9517283 9517326 -11629382 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 657 251 221 0 42 chr2R 9517730 9517801 -11628907 + T-rich Low_complexity Low_complexity 1 68 0 1 657 180 0 0 0 chr2R 9521525 9521545 -11625163 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 657 255 140 0 0 chr2R 9522205 9522255 -11624453 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 657 234 263 0 0 chr2R 9522371 9522428 -11624280 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 657 21 36 0 0 chr2R 9523898 9523926 -11622782 + AT_rich Low_complexity Low_complexity 1 28 0 1 657 26 0 0 0 chr2R 9524246 9524272 -11622436 + AT_rich Low_complexity Low_complexity 1 26 0 1 657 260 215 15 0 chr2R 9525607 9525672 -11621036 + CT-rich Low_complexity Low_complexity 2 67 0 1 657 25 0 0 0 chr2R 9527457 9527482 -11619226 + AT_rich Low_complexity Low_complexity 1 25 0 1 657 23 0 0 0 chr2R 9527748 9527771 -11618937 + AT_rich Low_complexity Low_complexity 1 23 0 1 657 204 135 0 0 chr2R 9529218 9529255 -11617453 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 657 21 0 0 0 chr2R 9531162 9531183 -11615525 + AT_rich Low_complexity Low_complexity 1 21 0 1 657 327 174 0 0 chr2R 9533219 9533305 -11613403 + (TG)n Simple_repeat Simple_repeat 1 86 0 1 657 213 39 0 0 chr2R 9534340 9534366 -11612342 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 657 180 0 0 0 chr2R 9542039 9542059 -11604649 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 657 22 0 0 0 chr2R 9545227 9545249 -11601459 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 209 255 0 0 chr2R 9548473 9548520 -11598188 + (CAG)n Simple_repeat Simple_repeat 1 47 0 1 657 243 314 14 28 chr2R 9554336 9554480 -11592228 + GA-rich Low_complexity Low_complexity 4 145 0 1 657 23 0 0 0 chr2R 9560002 9560025 -11586683 + AT_rich Low_complexity Low_complexity 1 23 0 1 657 213 132 0 0 chr2R 9562371 9562409 -11584299 + (TCCG)n Simple_repeat Simple_repeat 2 39 0 1 657 243 160 20 0 chr2R 9563864 9563914 -11582794 - HOBO DNA hAT -16 3000 2950 1 657 315 172 17 0 chr2R 9563951 9564009 -11582699 - HOBO DNA hAT -2896 120 62 1 657 279 0 0 0 chr2R 9564617 9564648 -11582060 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 657 182 37 0 36 chr2R 9565255 9565283 -11581425 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 657 285 29 0 0 chr2R 9565323 9565357 -11581351 + (CAGT)n Simple_repeat Simple_repeat 3 36 0 1 657 209 156 44 0 chr2R 9567586 9567631 -11579077 + (CGAAT)n Simple_repeat Simple_repeat 2 48 0 1 657 25 51 0 0 chr2R 9568118 9568157 -11578551 + AT_rich Low_complexity Low_complexity 1 39 0 1 658 23 33 0 0 chr2R 9568750 9568780 -11577928 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 189 0 0 0 chr2R 9572200 9572221 -11574487 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 658 26 30 0 0 chr2R 9573216 9573249 -11573459 + AT_rich Low_complexity Low_complexity 1 33 0 1 658 180 0 0 0 chr2R 9573903 9573923 -11572785 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 658 232 279 0 0 chr2R 9577590 9577651 -11569057 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 658 726 12 0 0 chr2R 9579264 9579347 -11567361 + (TG)n Simple_repeat Simple_repeat 2 84 0 1 658 27 0 0 0 chr2R 9580826 9580853 -11565855 + AT_rich Low_complexity Low_complexity 1 27 0 1 658 26 0 0 0 chr2R 9581207 9581233 -11565475 + AT_rich Low_complexity Low_complexity 1 26 0 1 658 213 200 0 0 chr2R 9581533 9581578 -11565130 + (CAGC)n Simple_repeat Simple_repeat 1 45 0 1 658 23 33 0 0 chr2R 9583035 9583065 -11563643 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 22 35 0 0 chr2R 9585707 9585736 -11560972 + AT_rich Low_complexity Low_complexity 1 29 0 1 658 31 44 0 0 chr2R 9586227 9586272 -11560436 + AT_rich Low_complexity Low_complexity 1 45 0 1 658 189 132 0 0 chr2R 9587080 9587118 -11559590 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1 658 246 32 0 0 chr2R 9587400 9587431 -11559277 + (A)n Simple_repeat Simple_repeat 1 31 0 1 658 213 225 0 0 chr2R 9590458 9590498 -11556210 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 658 180 0 0 0 chr2R 9591460 9591480 -11555228 + (T)n Simple_repeat Simple_repeat 1 20 0 1 658 205 179 0 0 chr2R 9592149 9592188 -11554520 + (TGAG)n Simple_repeat Simple_repeat 4 42 0 1 658 234 136 0 0 chr2R 9594877 9594921 -11551787 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 1 658 180 125 0 0 chr2R 9594927 9594959 -11551749 + (GCTG)n Simple_repeat Simple_repeat 2 33 0 1 658 198 91 0 0 chr2R 9595255 9595288 -11551420 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 1 658 204 238 0 45 chr2R 9595940 9596006 -11550702 + (CTG)n Simple_repeat Simple_repeat 3 65 0 1 658 241 274 0 0 chr2R 9597114 9597187 -11549521 + GA-rich Low_complexity Low_complexity 2 74 0 1 658 321 26 0 0 chr2R 9597773 9597811 -11548897 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 658 348 119 0 0 chr2R 9600174 9600233 -11546475 + (CAGA)n Simple_repeat Simple_repeat 1 59 0 1 658 258 125 0 0 chr2R 9603982 9604030 -11542678 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 658 207 275 14 0 chr2R 9604061 9604130 -11542578 + (CAA)n Simple_repeat Simple_repeat 1 70 0 1 658 22 56 0 0 chr2R 9607672 9607708 -11539000 + AT_rich Low_complexity Low_complexity 1 36 0 1 658 257 220 0 0 chr2R 9610736 9610795 -11535913 + (TCCA)n Simple_repeat Simple_repeat 1 59 0 1 658 180 0 0 0 chr2R 9615422 9615442 -11531266 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 658 4729 6 2 0 chr2R 9615693 9616210 -11530498 + NOMAD_LTR LTR Gypsy 1 518 0 1 658 61400 1 1 0 chr2R 9616210 9622776 -11523932 + NOMAD_I LTR Gypsy 1 6572 0 1 658 4729 6 2 0 chr2R 9622776 9623293 -11523415 + NOMAD_LTR LTR Gypsy 1 518 0 1 658 210 156 0 0 chr2R 9626046 9626091 -11520617 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 658 180 111 0 0 chr2R 9628601 9628628 -11518080 + (AGGGGG)n Simple_repeat Simple_repeat 1 27 0 1 658 210 128 0 0 chr2R 9628892 9628931 -11517777 + (CCCCAA)n Simple_repeat Simple_repeat 3 41 0 1 658 219 255 0 0 chr2R 9633220 9633267 -11513441 + (ATGGTG)n Simple_repeat Simple_repeat 1 47 0 1 658 357 62 0 0 chr2R 9635568 9635616 -11511092 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 658 185 65 0 31 chr2R 9636024 9636056 -11510652 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 1 658 302 227 91 0 chr2R 9638967 9639033 -11507675 - DNAREP1_DM LINE Penelope -123 471 400 1 658 295 187 0 39 chr2R 9641303 9641381 -11505327 + ROO_I LTR Pao 651 725 -7531 1 658 204 167 24 0 chr2R 9641529 9641571 -11505137 + A-rich Low_complexity Low_complexity 2 44 0 1 658 189 94 0 0 chr2R 9642597 9642629 -11504079 + (GAGTG)n Simple_repeat Simple_repeat 5 36 0 1 658 234 0 0 0 chr2R 9642737 9642763 -11503945 + (CCA)n Simple_repeat Simple_repeat 1 26 0 1 658 21 82 0 0 chr2R 9646396 9646445 -11500263 + AT_rich Low_complexity Low_complexity 1 49 0 1 658 24 32 0 0 chr2R 9647415 9647446 -11499262 + AT_rich Low_complexity Low_complexity 1 31 0 1 658 228 35 0 0 chr2R 9651549 9651578 -11495130 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 658 35 0 0 0 chr2R 9652147 9652182 -11494526 + AT_rich Low_complexity Low_complexity 1 35 0 1 658 204 219 0 0 chr2R 9653666 9653707 -11493001 + (CAA)n Simple_repeat Simple_repeat 1 41 0 1 658 183 80 0 0 chr2R 9655180 9655205 -11491503 + (TTCGG)n Simple_repeat Simple_repeat 5 29 0 1 658 180 77 0 0 chr2R 9656364 9656390 -11490318 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 1 658 192 152 0 0 chr2R 9657480 9657513 -11489195 + (CGAAA)n Simple_repeat Simple_repeat 3 35 0 1 658 21 0 0 0 chr2R 9657655 9657676 -11489032 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 23 33 0 0 chr2R 9657728 9657758 -11488950 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 23 0 0 0 chr2R 9659715 9659738 -11486970 + AT_rich Low_complexity Low_complexity 1 23 0 1 658 210 150 0 0 chr2R 9660212 9660252 -11486456 + (TAG)n Simple_repeat Simple_repeat 1 40 0 1 658 21 36 0 0 chr2R 9664066 9664094 -11482614 + AT_rich Low_complexity Low_complexity 1 28 0 1 658 182 91 0 29 chr2R 9668542 9668576 -11478132 + (TTGG)n Simple_repeat Simple_repeat 1 33 0 1 658 202 200 0 24 chr2R 9671049 9671090 -11475618 + (CTGGGG)n Simple_repeat Simple_repeat 4 43 0 1 658 180 111 0 0 chr2R 9672406 9672433 -11474275 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 1 658 204 97 0 0 chr2R 9672695 9672726 -11473982 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1 658 21 0 0 0 chr2R 9675676 9675697 -11471011 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 222 245 0 67 chr2R 9676480 9676585 -11470123 + T-rich Low_complexity Low_complexity 2 99 0 1 658 201 154 0 0 chr2R 9679681 9679720 -11466988 + (CAG)n Simple_repeat Simple_repeat 3 41 0 1 658 216 97 0 0 chr2R 9679855 9679886 -11466822 + (CAG)n Simple_repeat Simple_repeat 2 32 0 1 658 28 29 0 0 chr2R 9680980 9681015 -11465693 + AT_rich Low_complexity Low_complexity 1 35 0 1 658 201 132 0 0 chr2R 9681625 9681663 -11465045 + (A)n Simple_repeat Simple_repeat 1 38 0 1 658 234 192 0 0 chr2R 9682183 9682235 -11464473 + (CCG)n Simple_repeat Simple_repeat 2 53 0 1 658 183 80 0 0 chr2R 9682575 9682600 -11464108 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 1 658 201 175 0 0 chr2R 9682853 9682893 -11463815 + (TATG)n Simple_repeat Simple_repeat 1 40 0 1 658 201 74 0 0 chr2R 9683337 9683364 -11463344 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 658 207 0 0 0 chr2R 9685247 9685270 -11461438 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 658 201 39 0 0 chr2R 9686136 9686162 -11460546 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 658 23 54 0 0 chr2R 9689893 9689930 -11456778 + AT_rich Low_complexity Low_complexity 1 37 0 1 658 22 35 0 0 chr2R 9690056 9690085 -11456623 + AT_rich Low_complexity Low_complexity 1 29 0 1 658 261 0 0 0 chr2R 9690354 9690383 -11456325 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 658 201 161 0 0 chr2R 9690437 9690468 -11456240 + (TATG)n Simple_repeat Simple_repeat 3 33 0 1 658 206 167 24 0 chr2R 9693941 9693983 -11452725 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 658 219 286 0 0 chr2R 9695714 9695777 -11450931 + CT-rich Low_complexity Low_complexity 2 64 0 1 658 24 0 0 0 chr2R 9695976 9696000 -11450708 + AT_rich Low_complexity Low_complexity 1 24 0 1 658 252 0 0 0 chr2R 9698595 9698623 -11448085 + (CTA)n Simple_repeat Simple_repeat 2 29 0 1 658 192 40 0 0 chr2R 9698932 9698957 -11447751 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 659 22 0 0 0 chr2R 9699644 9699666 -11447042 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 21 0 0 0 chr2R 9705266 9705287 -11441421 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 473 99 12 0 chr2R 9705952 9706033 -11440675 + (TG)n Simple_repeat Simple_repeat 1 82 0 1 659 22 0 0 0 chr2R 9709931 9709953 -11436755 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 27 0 0 0 chr2R 9710264 9710291 -11436417 + AT_rich Low_complexity Low_complexity 1 27 0 1 659 22 0 0 0 chr2R 9710637 9710659 -11436049 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 446 114 0 12 chr2R 9711346 9711426 -11435282 + (CTG)n Simple_repeat Simple_repeat 1 79 0 1 659 183 167 0 0 chr2R 9711426 9711468 -11435240 + (ATGGTG)n Simple_repeat Simple_repeat 1 42 0 1 659 201 121 0 0 chr2R 9711657 9711690 -11435018 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 659 195 100 0 0 chr2R 9711747 9711777 -11434931 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 659 21 0 0 0 chr2R 9713618 9713639 -11433069 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 24 32 0 0 chr2R 9713666 9713697 -11433011 + AT_rich Low_complexity Low_complexity 1 31 0 1 659 243 79 0 0 chr2R 9714182 9714220 -11432488 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 659 288 268 0 0 chr2R 9717424 9717495 -11429213 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 659 30 59 0 0 chr2R 9719915 9719966 -11426742 + AT_rich Low_complexity Low_complexity 1 51 0 1 659 24 0 0 0 chr2R 9720024 9720048 -11426660 + AT_rich Low_complexity Low_complexity 1 24 0 1 659 249 164 0 32 chr2R 9720419 9720482 -11426226 + A-rich Low_complexity Low_complexity 3 63 0 1 659 279 122 0 0 chr2R 9723093 9723142 -11423566 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 1 659 189 74 0 0 chr2R 9725130 9725157 -11421551 + (GGATG)n Simple_repeat Simple_repeat 5 31 0 1 659 256 232 0 0 chr2R 9727108 9727164 -11419544 + DNAREP1_DM LINE Penelope 1 56 -538 1 659 26 30 0 0 chr2R 9729268 9729301 -11417407 + AT_rich Low_complexity Low_complexity 1 33 0 1 659 26 50 0 0 chr2R 9729578 9729618 -11417090 + AT_rich Low_complexity Low_complexity 1 40 0 1 659 302 45 23 0 chr2R 9730368 9730412 -11416296 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 659 186 103 0 0 chr2R 9730495 9730524 -11416184 + (CATCC)n Simple_repeat Simple_repeat 5 33 0 1 659 21 0 0 0 chr2R 9731855 9731876 -11414832 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 22 35 0 0 chr2R 9744853 9744882 -11401826 + AT_rich Low_complexity Low_complexity 1 29 0 1 659 43 76 0 0 chr2R 9746303 9746395 -11400313 + AT_rich Low_complexity Low_complexity 1 92 0 1 659 186 43 0 0 chr2R 9751444 9751467 -11395241 + (GGA)n Simple_repeat Simple_repeat 3 25 0 1 659 202 267 0 0 chr2R 9752261 9752336 -11394372 + T-rich Low_complexity Low_complexity 1 75 0 1 659 205 133 0 43 chr2R 9752464 9752511 -11394197 + (TAG)n Simple_repeat Simple_repeat 1 45 0 1 659 24 0 0 0 chr2R 9753837 9753861 -11392847 + AT_rich Low_complexity Low_complexity 1 24 0 1 659 23 0 0 0 chr2R 9757038 9757061 -11389647 + AT_rich Low_complexity Low_complexity 1 23 0 1 659 25 31 0 0 chr2R 9759387 9759419 -11387289 + AT_rich Low_complexity Low_complexity 1 32 0 1 659 24 0 0 0 chr2R 9762328 9762352 -11384356 + AT_rich Low_complexity Low_complexity 1 24 0 1 659 201 158 0 0 chr2R 9770471 9770509 -11376199 + T-rich Low_complexity Low_complexity 4 41 0 1 659 21 36 0 0 chr2R 9770575 9770603 -11376105 + AT_rich Low_complexity Low_complexity 1 28 0 1 659 202 204 0 0 chr2R 9777345 9777389 -11369319 + (TTG)n Simple_repeat Simple_repeat 3 46 0 1 659 23 33 0 0 chr2R 9782305 9782335 -11364373 + AT_rich Low_complexity Low_complexity 1 30 0 1 659 205 191 0 0 chr2R 9783217 9783259 -11363449 + A-rich Low_complexity Low_complexity 1 42 0 1 659 23 0 0 0 chr2R 9784163 9784186 -11362522 + AT_rich Low_complexity Low_complexity 1 23 0 1 659 186 133 0 0 chr2R 9784581 9784611 -11362097 + (T)n Simple_repeat Simple_repeat 1 30 0 1 659 195 42 0 0 chr2R 9785424 9785448 -11361260 + (GGGAA)n Simple_repeat Simple_repeat 1 24 0 1 659 29 47 0 0 chr2R 9785831 9785874 -11360834 + AT_rich Low_complexity Low_complexity 1 43 0 1 659 27 29 0 0 chr2R 9786470 9786504 -11360204 + AT_rich Low_complexity Low_complexity 1 34 0 1 659 286 232 0 12 chr2R 9787384 9787467 -11359241 + (TTTG)n Simple_repeat Simple_repeat 2 83 0 1 659 21 36 0 0 chr2R 9788614 9788642 -11358066 + AT_rich Low_complexity Low_complexity 1 28 0 1 659 21 0 0 0 chr2R 9791112 9791133 -11355575 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 17588 2 1 0 chr2R 9793164 9795071 -11351637 + DMRT1A LINE R1 3276 5183 0 1 659 210 37 0 0 chr2R 9797010 9797037 -11349671 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 1 659 21 0 0 0 chr2R 9797737 9797758 -11348950 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 217 280 0 21 chr2R 9799459 9799554 -11347154 + GA-rich Low_complexity Low_complexity 2 94 0 1 659 24 32 0 0 chr2R 9801836 9801867 -11344841 + AT_rich Low_complexity Low_complexity 1 31 0 1 659 312 70 0 0 chr2R 9804135 9804178 -11342530 + (CAGT)n Simple_repeat Simple_repeat 4 46 0 1 659 23 0 0 0 chr2R 9804530 9804553 -11342155 + AT_rich Low_complexity Low_complexity 1 23 0 1 659 21 0 0 0 chr2R 9805425 9805446 -11341262 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 192 125 0 0 chr2R 9809189 9809221 -11337487 + (ATG)n Simple_repeat Simple_repeat 3 34 0 1 659 25 0 0 0 chr2R 9810131 9810156 -11336552 + AT_rich Low_complexity Low_complexity 1 25 0 1 659 22 0 0 0 chr2R 9811190 9811212 -11335496 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 276 288 0 0 chr2R 9811598 9811671 -11335037 + CT-rich Low_complexity Low_complexity 1 73 0 1 659 260 148 16 0 chr2R 9812384 9812445 -11334263 + (CAA)n Simple_repeat Simple_repeat 3 64 0 1 659 215 246 17 17 chr2R 9812879 9812937 -11333771 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 659 698 19 57 0 chr2R 9813419 9813525 -11333183 + (TTAA)n Simple_repeat Simple_repeat 4 115 0 1 659 24 0 0 0 chr2R 9816156 9816180 -11330528 + AT_rich Low_complexity Low_complexity 1 24 0 1 659 204 40 0 0 chr2R 9817724 9817749 -11328959 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 659 22 0 0 0 chr2R 9818015 9818037 -11328671 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 257 197 0 62 chr2R 9821331 9821396 -11325312 + (ATGGTG)n Simple_repeat Simple_repeat 1 61 0 1 659 209 280 0 0 chr2R 9827603 9827653 -11319055 + (TATG)n Simple_repeat Simple_repeat 4 53 0 1 659 21 0 0 0 chr2R 9827980 9828001 -11318707 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 202 234 0 0 chr2R 9829167 9829214 -11317494 + (TTG)n Simple_repeat Simple_repeat 1 47 0 1 660 211 54 54 0 chr2R 9831463 9831500 -11315208 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 1 660 199 133 44 0 chr2R 9832173 9832218 -11314490 + T-rich Low_complexity Low_complexity 2 48 0 1 660 181 91 44 22 chr2R 9832894 9832939 -11313769 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 1 660 23 0 0 0 chr2R 9833107 9833130 -11313578 + AT_rich Low_complexity Low_complexity 1 23 0 1 660 29 0 0 0 chr2R 9834053 9834082 -11312626 + AT_rich Low_complexity Low_complexity 1 29 0 1 660 180 0 0 0 chr2R 9834508 9834528 -11312180 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 660 206 156 22 0 chr2R 9839469 9839514 -11307194 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 660 214 188 11 23 chr2R 9840674 9840761 -11305947 + T-rich Low_complexity Low_complexity 3 88 0 1 660 208 161 16 16 chr2R 9840945 9841008 -11305700 + (TTA)n Simple_repeat Simple_repeat 2 64 0 1 660 239 274 14 0 chr2R 9841056 9841129 -11305579 + (TA)n Simple_repeat Simple_repeat 1 74 0 1 660 219 167 0 20 chr2R 9843312 9843361 -11303347 + (CTG)n Simple_repeat Simple_repeat 1 48 0 1 660 22 35 0 0 chr2R 9844558 9844587 -11302121 + AT_rich Low_complexity Low_complexity 1 29 0 1 660 25 0 0 0 chr2R 9845975 9846000 -11300708 + AT_rich Low_complexity Low_complexity 1 25 0 1 660 24 32 0 0 chr2R 9849216 9849247 -11297461 + AT_rich Low_complexity Low_complexity 1 31 0 1 660 30 45 0 0 chr2R 9849305 9849349 -11297359 + AT_rich Low_complexity Low_complexity 1 44 0 1 660 231 36 0 0 chr2R 9852095 9852123 -11294585 + (CCA)n Simple_repeat Simple_repeat 1 28 0 1 660 34 0 0 0 chr2R 9855459 9855493 -11291215 + AT_rich Low_complexity Low_complexity 1 34 0 1 660 25 0 0 0 chr2R 9858483 9858508 -11288200 + AT_rich Low_complexity Low_complexity 1 25 0 1 660 25 65 0 0 chr2R 9860496 9860542 -11286166 + AT_rich Low_complexity Low_complexity 1 46 0 1 660 189 74 0 0 chr2R 9866132 9866159 -11280549 + (CATA)n Simple_repeat Simple_repeat 4 30 0 1 660 232 272 0 28 chr2R 9866807 9866913 -11279795 + T-rich Low_complexity Low_complexity 6 108 0 1 660 31 0 0 0 chr2R 9867464 9867495 -11279213 + AT_rich Low_complexity Low_complexity 1 31 0 1 660 30 45 0 0 chr2R 9867787 9867831 -11278877 + AT_rich Low_complexity Low_complexity 1 44 0 1 660 34 65 0 0 chr2R 9867845 9867907 -11278801 + AT_rich Low_complexity Low_complexity 1 62 0 1 660 22 0 0 0 chr2R 9868000 9868022 -11278686 + AT_rich Low_complexity Low_complexity 1 22 0 1 660 25 0 0 0 chr2R 9870910 9870935 -11275773 + AT_rich Low_complexity Low_complexity 1 25 0 1 660 195 42 0 0 chr2R 9875029 9875053 -11271655 + (T)n Simple_repeat Simple_repeat 1 24 0 1 660 204 121 0 29 chr2R 9875678 9875712 -11270996 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1 660 22 35 0 0 chr2R 9875943 9875972 -11270736 + AT_rich Low_complexity Low_complexity 1 29 0 1 660 203 125 25 0 chr2R 9877935 9877975 -11268733 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 660 25 65 0 0 chr2R 9878386 9878432 -11268276 + AT_rich Low_complexity Low_complexity 1 46 0 1 660 333 0 0 0 chr2R 9879070 9879107 -11267601 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 660 23 0 0 0 chr2R 9880492 9880515 -11266193 + AT_rich Low_complexity Low_complexity 1 23 0 1 660 227 146 11 128 chr2R 9882412 9882506 -11264202 - ROO_I LTR Pao -7533 723 641 1 660 21 0 0 0 chr2R 9882714 9882735 -11263973 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 267 157 0 0 chr2R 9883248 9883299 -11263409 + (CAG)n Simple_repeat Simple_repeat 3 53 0 1 660 32 0 0 0 chr2R 9884401 9884433 -11262275 + AT_rich Low_complexity Low_complexity 1 32 0 1 660 22 0 0 0 chr2R 9887084 9887106 -11259602 + AT_rich Low_complexity Low_complexity 1 22 0 1 660 24 32 0 0 chr2R 9888003 9888034 -11258674 + AT_rich Low_complexity Low_complexity 1 31 0 1 660 213 94 0 0 chr2R 9888221 9888253 -11258455 + (CTG)n Simple_repeat Simple_repeat 3 34 0 1 660 287 218 9 35 chr2R 9888390 9888504 -11258204 + ROO_I LTR Pao 629 739 -7517 1 660 209 268 14 0 chr2R 9889520 9889591 -11257117 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 660 22 35 0 0 chr2R 9890121 9890150 -11256558 + AT_rich Low_complexity Low_complexity 1 29 0 1 660 24 32 0 0 chr2R 9890585 9890616 -11256092 + AT_rich Low_complexity Low_complexity 1 31 0 1 660 210 37 0 0 chr2R 9892015 9892042 -11254666 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 1 660 386 114 14 0 chr2R 9892376 9892446 -11254262 + (CTG)n Simple_repeat Simple_repeat 1 71 0 1 660 22 35 0 0 chr2R 9892781 9892810 -11253898 + AT_rich Low_complexity Low_complexity 1 29 0 1 660 24 32 0 0 chr2R 9896332 9896363 -11250345 + AT_rich Low_complexity Low_complexity 1 31 0 1 660 24 0 0 0 chr2R 9896417 9896441 -11250267 + AT_rich Low_complexity Low_complexity 1 24 0 1 660 237 65 0 0 chr2R 9896792 9896823 -11249885 + (TTCTG)n Simple_repeat Simple_repeat 2 32 0 1 660 252 0 0 0 chr2R 9897783 9897811 -11248897 + (CAG)n Simple_repeat Simple_repeat 1 28 0 1 660 279 79 0 0 chr2R 9898047 9898085 -11248623 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 660 294 130 0 140 chr2R 9898137 9898244 -11248464 + ROO_I LTR Pao 641 732 -7524 1 660 396 104 0 0 chr2R 9898574 9898641 -11248067 + (CAG)n Simple_repeat Simple_repeat 3 69 0 1 660 201 152 0 0 chr2R 9899254 9899287 -11247421 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1 660 228 149 0 0 chr2R 9901024 9901071 -11245637 + (TTG)n Simple_repeat Simple_repeat 1 47 0 1 660 24 32 0 0 chr2R 9902447 9902478 -11244230 + AT_rich Low_complexity Low_complexity 1 31 0 1 660 321 26 0 0 chr2R 9902743 9902781 -11243927 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 660 252 111 0 0 chr2R 9903150 9903195 -11243513 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 660 198 0 0 0 chr2R 9906222 9906244 -11240464 + (CCG)n Simple_repeat Simple_repeat 1 22 0 1 660 37 0 0 0 chr2R 9910655 9910692 -11236016 + AT_rich Low_complexity Low_complexity 1 37 0 1 660 22 35 0 0 chr2R 9911364 9911393 -11235315 + AT_rich Low_complexity Low_complexity 1 29 0 1 660 28 29 0 0 chr2R 9912090 9912125 -11234583 + AT_rich Low_complexity Low_complexity 1 35 0 1 660 241 200 16 16 chr2R 9912284 9912345 -11234363 + (TGAG)n Simple_repeat Simple_repeat 2 62 0 1 660 210 71 0 0 chr2R 9912959 9912987 -11233721 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1 660 234 170 0 70 chr2R 9913959 9914016 -11232692 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1 660 324 0 0 0 chr2R 9914044 9914080 -11232628 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 660 189 107 0 0 chr2R 9914562 9914590 -11232118 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1 660 231 114 0 0 chr2R 9914812 9914847 -11231861 + (CAA)n Simple_repeat Simple_repeat 1 35 0 1 660 211 304 14 0 chr2R 9915632 9915701 -11231007 + G-rich Low_complexity Low_complexity 1 70 0 1 660 207 100 0 0 chr2R 9916830 9916860 -11229848 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 660 250 193 24 0 chr2R 9917765 9917848 -11228860 + ROO_I LTR Pao 641 725 -7531 1 660 198 118 0 0 chr2R 9918858 9918892 -11227816 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 660 295 211 38 19 chr2R 9919201 9919307 -11227401 + ROO_I LTR Pao 639 746 -7510 1 660 238 253 40 0 chr2R 9919355 9919430 -11227278 + (CAA)n Simple_repeat Simple_repeat 1 78 0 1 660 294 290 0 0 chr2R 9926292 9926430 -11220278 + (CAA)n Simple_repeat Simple_repeat 2 139 0 1 660 293 312 0 0 chr2R 9926580 9926660 -11220048 + (CGG)n Simple_repeat Simple_repeat 2 81 0 1 660 192 125 0 0 chr2R 9926691 9926723 -11219985 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 660 290 111 0 53 chr2R 9927455 9927512 -11219196 + (CAG)n Simple_repeat Simple_repeat 3 56 0 1 660 264 111 0 0 chr2R 9927602 9927647 -11219061 + (CAG)n Simple_repeat Simple_repeat 3 47 0 1 660 260 125 0 86 chr2R 9927777 9927847 -11218861 + ROO_I LTR Pao 662 725 -7531 1 660 362 191 0 0 chr2R 9927871 9927965 -11218743 + ROO_I LTR Pao 636 729 -7527 1 660 210 128 0 0 chr2R 9928713 9928752 -11217956 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 660 316 40 0 39 chr2R 9929853 9929905 -11216803 + (CAA)n Simple_repeat Simple_repeat 1 50 0 1 660 259 194 16 16 chr2R 9930002 9930065 -11216643 + GA-rich Low_complexity Low_complexity 2 64 0 1 660 180 0 0 0 chr2R 9931807 9931827 -11214881 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 660 195 152 0 0 chr2R 9931827 9931873 -11214835 + GA-rich Low_complexity Low_complexity 1 46 0 1 660 201 39 0 0 chr2R 9933849 9933875 -11212833 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 660 204 40 0 0 chr2R 9934436 9934461 -11212247 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 660 294 29 0 0 chr2R 9934604 9934639 -11212069 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 660 279 191 0 0 chr2R 9936415 9936483 -11210225 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 660 285 98 0 0 chr2R 9936975 9937016 -11209692 + (TTG)n Simple_repeat Simple_repeat 1 41 0 1 660 252 100 0 0 chr2R 9937312 9937352 -11209356 + (GATTG)n Simple_repeat Simple_repeat 5 44 0 1 660 22 0 0 0 chr2R 9937485 9937507 -11209201 + AT_rich Low_complexity Low_complexity 1 22 0 1 660 21 0 0 0 chr2R 9938553 9938574 -11208134 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 222 167 0 0 chr2R 9939584 9939644 -11207064 + (GATTG)n Simple_repeat Simple_repeat 5 64 0 1 660 243 103 0 0 chr2R 9940700 9940739 -11205969 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 660 180 77 0 0 chr2R 9942508 9942534 -11204174 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 660 204 135 0 0 chr2R 9943351 9943388 -11203320 + (CAG)n Simple_repeat Simple_repeat 1 37 0 1 660 326 207 24 32 chr2R 9943671 9943796 -11202912 + (CAG)n Simple_repeat Simple_repeat 1 124 0 1 660 204 208 0 0 chr2R 9943838 9943886 -11202822 + G-rich Low_complexity Low_complexity 5 52 0 1 660 215 261 0 0 chr2R 9944264 9944329 -11202379 + G-rich Low_complexity Low_complexity 4 68 0 1 660 273 57 0 0 chr2R 9944897 9944932 -11201776 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 660 203 178 27 27 chr2R 9945056 9945131 -11201577 + (CAG)n Simple_repeat Simple_repeat 1 75 0 1 660 208 279 25 25 chr2R 9945149 9945230 -11201478 + (CGG)n Simple_repeat Simple_repeat 2 82 0 1 660 236 137 0 38 chr2R 9945442 9945495 -11201213 + (CCA)n Simple_repeat Simple_repeat 3 53 0 1 660 283 60 20 20 chr2R 9945717 9945768 -11200940 + (TATTG)n Simple_repeat Simple_repeat 2 52 0 1 660 26 30 0 0 chr2R 9946138 9946171 -11200537 + AT_rich Low_complexity Low_complexity 1 33 0 1 660 233 136 31 78 chr2R 9946171 9946235 -11200473 + A-rich Low_complexity Low_complexity 6 66 0 1 660 30 45 0 0 chr2R 9946427 9946471 -11200237 + AT_rich Low_complexity Low_complexity 1 44 0 1 660 25 0 0 0 chr2R 9947138 9947163 -11199545 + AT_rich Low_complexity Low_complexity 1 25 0 1 660 258 32 0 0 chr2R 9947368 9947399 -11199309 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 660 456 128 0 0 chr2R 9949947 9950025 -11196683 + (CTG)n Simple_repeat Simple_repeat 1 78 0 1 660 306 152 0 0 chr2R 9950260 9950319 -11196389 + (CTG)n Simple_repeat Simple_repeat 1 59 0 1 660 270 219 0 30 chr2R 9954902 9955001 -11191707 + (CTG)n Simple_repeat Simple_repeat 1 96 0 1 660 257 51 26 0 chr2R 9955994 9956033 -11190675 + (ATTG)n Simple_repeat Simple_repeat 3 42 0 1 660 208 0 30 30 chr2R 9957006 9957039 -11189669 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 660 180 163 0 0 chr2R 9959304 9959347 -11187361 + (CCCCAA)n Simple_repeat Simple_repeat 1 43 0 1 660 239 292 0 0 chr2R 9961063 9961135 -11185573 - ROO_I LTR Pao -7525 731 660 1 661 24 53 0 0 chr2R 9963791 9963829 -11182879 + AT_rich Low_complexity Low_complexity 1 38 0 1 661 180 0 0 0 chr2R 9965185 9965205 -11181503 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 661 27 0 0 0 chr2R 9965674 9965701 -11181007 + AT_rich Low_complexity Low_complexity 1 27 0 1 661 186 43 0 0 chr2R 9967491 9967514 -11179194 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 661 22 70 0 0 chr2R 9973161 9973204 -11173504 + AT_rich Low_complexity Low_complexity 1 43 0 1 661 21 0 0 0 chr2R 9973251 9973272 -11173436 + AT_rich Low_complexity Low_complexity 1 21 0 1 661 243 157 0 0 chr2R 9976007 9976058 -11170650 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 1 661 258 143 0 0 chr2R 9976935 9976984 -11169724 + (CAGTT)n Simple_repeat Simple_repeat 3 51 0 1 661 22 35 0 0 chr2R 9980034 9980063 -11166645 + AT_rich Low_complexity Low_complexity 1 29 0 1 661 4017 0 0 0 chr2R 9980994 9981422 -11165286 - ROO_LTR LTR Pao 0 428 1 1 661 71468 0 2 0 chr2R 9981422 9989294 -11157414 - ROO_I LTR Pao 0 8256 369 1 661 2474 8 0 0 chr2R 9989294 9989560 -11157148 - DMLTR5 LTR Gypsy 0 266 1 1 661 51650 0 0 0 chr2R 9989560 9995115 -11151593 - HMSBEAGLE_I LTR Gypsy 0 6529 976 1 661 633 51 42 17 chr2R 9995115 9995235 -11151473 + (TAA)n Simple_repeat Simple_repeat 3 125 0 1 661 6819 1 15 4 chr2R 9995235 9996022 -11150686 - HMSBEAGLE_I LTR Gypsy -5733 796 1 1 661 2474 8 0 0 chr2R 9996021 9996287 -11150421 - DMLTR5 LTR Gypsy 0 266 1 1 661 3433 8 0 0 chr2R 9996287 9996659 -11150049 - ROO_I LTR Pao -7884 372 1 1 661 4017 0 0 0 chr2R 9996659 9997087 -11149621 - ROO_LTR LTR Pao 0 428 1 1 661 41 0 0 0 chr2R 9997145 9997186 -11149522 + AT_rich Low_complexity Low_complexity 1 41 0 1 661 21 0 0 0 chr2R 9998697 9998718 -11147990 + AT_rich Low_complexity Low_complexity 1 21 0 1 661 183 42 0 0 chr2R 10004786 10004810 -11141898 + (TAAAAA)n Simple_repeat Simple_repeat 1 24 0 1 661 21 36 0 0 chr2R 10006883 10006911 -11139797 + AT_rich Low_complexity Low_complexity 1 28 0 1 661 22 56 0 0 chr2R 10006951 10006987 -11139721 + AT_rich Low_complexity Low_complexity 1 36 0 1 661 205 175 0 0 chr2R 10007138 10007178 -11139530 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 661 204 97 0 0 chr2R 10008620 10008651 -11138057 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 661 30 45 0 0 chr2R 10013770 10013814 -11132894 + AT_rich Low_complexity Low_complexity 1 44 0 1 661 208 250 0 0 chr2R 10013996 10014036 -11132672 + (CTTTG)n Simple_repeat Simple_repeat 5 44 0 1 661 230 228 0 0 chr2R 10014048 10014105 -11132603 + (CAG)n Simple_repeat Simple_repeat 3 59 0 1 661 25 51 0 0 chr2R 10018540 10018579 -11128129 + AT_rich Low_complexity Low_complexity 1 39 0 1 661 33 56 0 0 chr2R 10019381 10019435 -11127273 + AT_rich Low_complexity Low_complexity 1 54 0 1 661 204 200 0 0 chr2R 10026137 10026187 -11120521 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 661 216 231 15 15 chr2R 10026354 10026420 -11120288 + (CAA)n Simple_repeat Simple_repeat 2 67 0 1 661 235 217 0 0 chr2R 10027474 10027520 -11119188 + CT-rich Low_complexity Low_complexity 2 47 0 1 661 198 171 0 0 chr2R 10027876 10027917 -11118791 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 661 24 67 0 0 chr2R 10030385 10030430 -11116278 + AT_rich Low_complexity Low_complexity 1 45 0 1 661 31 26 0 0 chr2R 10030825 10030863 -11115845 + AT_rich Low_complexity Low_complexity 1 38 0 1 661 27 49 0 0 chr2R 10031907 10031948 -11114760 + AT_rich Low_complexity Low_complexity 1 41 0 1 661 25 65 0 0 chr2R 10035051 10035097 -11111611 + AT_rich Low_complexity Low_complexity 1 46 0 1 661 195 69 0 0 chr2R 10035313 10035342 -11111366 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 661 22 0 0 0 chr2R 10039921 10039943 -11106765 + AT_rich Low_complexity Low_complexity 1 22 0 1 661 22 35 0 0 chr2R 10044927 10044956 -11101752 + AT_rich Low_complexity Low_complexity 1 29 0 1 661 23 0 0 0 chr2R 10045145 10045168 -11101540 + AT_rich Low_complexity Low_complexity 1 23 0 1 661 31 68 0 0 chr2R 10048799 10048858 -11097850 + AT_rich Low_complexity Low_complexity 1 59 0 1 661 24 32 0 0 chr2R 10055889 10055920 -11090788 + AT_rich Low_complexity Low_complexity 1 31 0 1 661 31 0 0 0 chr2R 10057693 10057724 -11088984 + AT_rich Low_complexity Low_complexity 1 31 0 1 661 26 30 0 0 chr2R 10063660 10063693 -11083015 + AT_rich Low_complexity Low_complexity 1 33 0 1 661 36 0 0 0 chr2R 10064332 10064368 -11082340 + AT_rich Low_complexity Low_complexity 1 36 0 1 661 297 118 0 81 chr2R 10067130 10067204 -11079504 + ROO_I LTR Pao 662 729 -7527 1 661 222 279 0 0 chr2R 10068152 10068213 -11078495 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 661 317 195 22 44 chr2R 10068918 10069009 -11077699 + ROO_I LTR Pao 655 743 -7513 1 661 22 35 0 0 chr2R 10070839 10070868 -11075840 + AT_rich Low_complexity Low_complexity 1 29 0 1 661 22 0 0 0 chr2R 10073012 10073034 -11073674 + AT_rich Low_complexity Low_complexity 1 22 0 1 661 249 200 0 0 chr2R 10074060 10074135 -11072573 + ROO_I LTR Pao 653 727 -7529 1 661 201 211 0 0 chr2R 10088272 10088324 -11058384 + (TGG)n Simple_repeat Simple_repeat 1 52 0 1 661 270 95 0 0 chr2R 10092432 10092474 -11054234 + (GCTG)n Simple_repeat Simple_repeat 4 45 0 1 662 181 136 60 15 chr2R 10093213 10093280 -11053428 + (TCCG)n Simple_repeat Simple_repeat 2 71 0 1 662 303 161 0 0 chr2R 10094021 10094077 -11052631 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 662 204 40 0 0 chr2R 10095435 10095460 -11051248 + (CGGT)n Simple_repeat Simple_repeat 3 27 0 1 662 267 211 0 0 chr2R 10096054 10096111 -11050597 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 1 662 224 130 22 0 chr2R 10098599 10098645 -11048063 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 662 320 209 0 17 chr2R 10098889 10099006 -11047702 + (TTG)n Simple_repeat Simple_repeat 1 115 0 1 662 267 93 0 0 chr2R 10099672 10099715 -11046993 + (CTAA)n Simple_repeat Simple_repeat 4 46 0 1 662 24 0 0 0 chr2R 10100951 10100975 -11045733 + AT_rich Low_complexity Low_complexity 1 24 0 1 662 21 71 0 0 chr2R 10102501 10102543 -11044165 + AT_rich Low_complexity Low_complexity 1 42 0 1 662 27 29 0 0 chr2R 10104443 10104477 -11042231 + AT_rich Low_complexity Low_complexity 1 34 0 1 662 896 68 0 0 chr2R 10105485 10105603 -11041105 - TC1_DM DNA Tc1 0 1666 1549 1 662 1082 18 322 0 chr2R 10105601 10105828 -11040880 - TC1_DM DNA Tc1 -580 1086 787 1 662 1026 17 0 0 chr2R 10105831 10105947 -11040761 - TC1_DM DNA Tc1 -1090 576 461 1 662 260 114 54 54 chr2R 10105964 10106038 -11040670 + TC1_DM DNA Tc1 1398 1471 -195 1 662 1714 84 28 0 chr2R 10105977 10106227 -11040481 - TC1_DM DNA Tc1 -1409 257 1 1 662 235 154 15 15 chr2R 10107303 10107369 -11039339 - ROO_I LTR Pao -7548 708 643 1 662 189 0 0 0 chr2R 10107495 10107516 -11039192 + (ATTCG)n Simple_repeat Simple_repeat 5 25 0 1 662 285 164 0 0 chr2R 10107576 10107649 -11039059 + (CGAAA)n Simple_repeat Simple_repeat 3 75 0 1 662 210 224 0 0 chr2R 10107742 10107791 -11038917 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 662 180 0 0 0 chr2R 10108396 10108416 -11038292 + (CAG)n Simple_repeat Simple_repeat 3 22 0 1 662 214 288 0 29 chr2R 10111683 10111751 -11034957 + G-rich Low_complexity Low_complexity 1 66 0 1 662 23 33 0 0 chr2R 10117896 10117926 -11028782 + AT_rich Low_complexity Low_complexity 1 30 0 1 662 23 86 0 0 chr2R 10123013 10123071 -11023637 + AT_rich Low_complexity Low_complexity 1 58 0 1 662 25 51 0 0 chr2R 10123351 10123390 -11023318 + AT_rich Low_complexity Low_complexity 1 39 0 1 662 24 32 0 0 chr2R 10127267 10127298 -11019410 + AT_rich Low_complexity Low_complexity 1 31 0 1 662 21 0 0 0 chr2R 10127486 10127507 -11019201 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 23 0 0 0 chr2R 10130443 10130466 -11016242 + AT_rich Low_complexity Low_complexity 1 23 0 1 662 23 54 0 0 chr2R 10134096 10134133 -11012575 + AT_rich Low_complexity Low_complexity 1 37 0 1 662 192 40 0 0 chr2R 10134513 10134538 -11012170 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 662 321 100 0 0 chr2R 10163661 10163711 -10982997 + (CAG)n Simple_repeat Simple_repeat 3 52 0 1 662 21 0 0 0 chr2R 10163858 10163879 -10982829 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 189 121 0 0 chr2R 10164263 10164296 -10982412 + (CCA)n Simple_repeat Simple_repeat 1 33 0 1 662 183 186 0 0 chr2R 10164484 10164527 -10982181 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 662 239 274 42 25 chr2R 10164795 10164915 -10981793 + A-rich Low_complexity Low_complexity 5 126 0 1 662 219 189 38 0 chr2R 10165427 10165480 -10981228 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1 662 21 0 0 0 chr2R 10167465 10167486 -10979222 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 225 224 0 0 chr2R 10167831 10167889 -10978819 + (TTG)n Simple_repeat Simple_repeat 2 59 0 1 662 183 204 0 0 chr2R 10168639 10168688 -10978020 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 1 662 235 211 0 0 chr2R 10169094 10169146 -10977562 + CT-rich Low_complexity Low_complexity 2 53 0 1 662 211 200 0 0 chr2R 10169240 10169285 -10977423 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 662 283 220 9 35 chr2R 10173370 10173483 -10973225 + ROO_I LTR Pao 639 748 -7508 1 662 203 156 0 0 chr2R 10176330 10176362 -10970346 + (TACTG)n Simple_repeat Simple_repeat 4 35 0 1 662 225 65 0 0 chr2R 10176905 10176936 -10969772 + (CGATA)n Simple_repeat Simple_repeat 3 33 0 1 662 225 65 0 0 chr2R 10179442 10179473 -10967235 + (CTAA)n Simple_repeat Simple_repeat 3 33 0 1 662 198 118 0 0 chr2R 10181877 10181911 -10964797 + (TTCG)n Simple_repeat Simple_repeat 3 36 0 1 662 187 79 26 26 chr2R 10183461 10183500 -10963208 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 662 186 43 0 0 chr2R 10183680 10183703 -10963005 + (CTTAT)n Simple_repeat Simple_repeat 4 26 0 1 662 237 167 0 0 chr2R 10184093 10184147 -10962561 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 662 212 167 0 0 chr2R 10186378 10186420 -10960288 + A-rich Low_complexity Low_complexity 1 42 0 1 662 25 51 0 0 chr2R 10187154 10187193 -10959515 + AT_rich Low_complexity Low_complexity 1 39 0 1 662 21 0 0 0 chr2R 10190000 10190021 -10956687 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 324 120 0 0 chr2R 10191307 10191357 -10955351 + (ACTG)n Simple_repeat Simple_repeat 3 52 0 1 662 23 33 0 0 chr2R 10192254 10192284 -10954424 + AT_rich Low_complexity Low_complexity 1 30 0 1 662 23 0 0 0 chr2R 10192784 10192807 -10953901 + AT_rich Low_complexity Low_complexity 1 23 0 1 662 26 30 0 0 chr2R 10194026 10194059 -10952649 + AT_rich Low_complexity Low_complexity 1 33 0 1 662 216 254 0 0 chr2R 10196148 10196203 -10950505 + CT-rich Low_complexity Low_complexity 3 57 0 1 662 21 36 0 0 chr2R 10199774 10199802 -10946906 + AT_rich Low_complexity Low_complexity 1 28 0 1 662 227 125 54 0 chr2R 10201837 10201893 -10944815 + (TCTCG)n Simple_repeat Simple_repeat 5 63 0 1 662 27 29 0 0 chr2R 10203049 10203083 -10943625 + AT_rich Low_complexity Low_complexity 1 34 0 1 662 198 0 0 0 chr2R 10203295 10203317 -10943391 + (AAATG)n Simple_repeat Simple_repeat 4 25 0 1 662 21 36 0 0 chr2R 10203919 10203947 -10942761 + AT_rich Low_complexity Low_complexity 1 28 0 1 662 27 0 0 0 chr2R 10203958 10203985 -10942723 + AT_rich Low_complexity Low_complexity 1 27 0 1 662 28 0 0 0 chr2R 10205134 10205162 -10941546 + AT_rich Low_complexity Low_complexity 1 28 0 1 662 261 294 0 0 chr2R 10205696 10205788 -10940920 + T-rich Low_complexity Low_complexity 1 92 0 1 662 207 100 0 0 chr2R 10206399 10206429 -10940279 + (CAGCT)n Simple_repeat Simple_repeat 2 31 0 1 662 435 141 0 0 chr2R 10206543 10206621 -10940087 + (CAG)n Simple_repeat Simple_repeat 3 80 0 1 662 246 105 0 0 chr2R 10207940 10207978 -10938730 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 662 180 0 0 0 chr2R 10208422 10208442 -10938266 + (CGATA)n Simple_repeat Simple_repeat 2 21 0 1 662 189 147 0 0 chr2R 10208459 10208493 -10938215 + (CAGGC)n Simple_repeat Simple_repeat 5 38 0 1 662 209 213 16 32 chr2R 10210034 10210097 -10936611 + (TCTCTG)n Simple_repeat Simple_repeat 3 64 0 1 662 225 151 0 0 chr2R 10211477 10211530 -10935178 + (ACTG)n Simple_repeat Simple_repeat 2 54 0 1 662 234 256 0 55 chr2R 10213974 10214065 -10932643 + (TCTCTG)n Simple_repeat Simple_repeat 1 86 0 1 662 237 180 0 0 chr2R 10214522 10214572 -10932136 + (CAA)n Simple_repeat Simple_repeat 1 50 0 1 662 216 0 0 0 chr2R 10215478 10215502 -10931206 + (CAG)n Simple_repeat Simple_repeat 1 24 0 1 662 219 139 0 0 chr2R 10221501 10221537 -10925171 + (CATA)n Simple_repeat Simple_repeat 1 36 0 1 663 32 26 0 0 chr2R 10225124 10225163 -10921545 + AT_rich Low_complexity Low_complexity 1 39 0 1 663 224 77 0 25 chr2R 10225297 10225337 -10921371 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 663 260 127 0 18 chr2R 10228816 10228872 -10917836 + (CATCC)n Simple_repeat Simple_repeat 1 55 0 1 663 29 28 0 0 chr2R 10229762 10229798 -10916910 + AT_rich Low_complexity Low_complexity 1 36 0 1 663 183 80 0 0 chr2R 10230493 10230518 -10916190 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 663 21 36 0 0 chr2R 10230578 10230606 -10916102 + AT_rich Low_complexity Low_complexity 1 28 0 1 663 276 77 0 0 chr2R 10230683 10230722 -10915986 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1 663 24 0 0 0 chr2R 10230869 10230893 -10915815 + AT_rich Low_complexity Low_complexity 1 24 0 1 663 180 0 0 0 chr2R 10231324 10231344 -10915364 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 1 663 213 39 0 0 chr2R 10231958 10231984 -10914724 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 663 228 175 0 0 chr2R 10232436 10232499 -10914209 + T-rich Low_complexity Low_complexity 4 66 0 1 663 201 147 0 0 chr2R 10233624 10233658 -10913050 + (CTG)n Simple_repeat Simple_repeat 3 36 0 1 663 276 128 136 37 chr2R 10233794 10233875 -10912833 + ROO_I LTR Pao 671 759 -7497 1 663 186 43 0 0 chr2R 10234120 10234143 -10912565 + (CTG)n Simple_repeat Simple_repeat 3 25 0 1 663 255 61 0 0 chr2R 10234494 10234527 -10912181 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1 663 209 83 28 0 chr2R 10234903 10234939 -10911769 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 663 205 161 0 0 chr2R 10235965 10235996 -10910712 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1 663 192 40 0 0 chr2R 10237835 10237860 -10908848 + (GGA)n Simple_repeat Simple_repeat 1 25 0 1 663 22 0 0 0 chr2R 10242001 10242023 -10904685 + AT_rich Low_complexity Low_complexity 1 22 0 1 663 23 0 0 0 chr2R 10254962 10254985 -10891723 + AT_rich Low_complexity Low_complexity 1 23 0 1 663 207 0 0 0 chr2R 10267626 10267649 -10879059 + (T)n Simple_repeat Simple_repeat 1 23 0 1 663 24 0 0 0 chr2R 10273786 10273810 -10872898 + AT_rich Low_complexity Low_complexity 1 24 0 1 663 25 0 0 0 chr2R 10274004 10274029 -10872679 + AT_rich Low_complexity Low_complexity 1 25 0 1 663 180 0 0 0 chr2R 10276215 10276235 -10870473 + (TTAGGG)n Simple_repeat Simple_repeat 1 20 0 1 663 180 0 0 0 chr2R 10276833 10276853 -10869855 + (A)n Simple_repeat Simple_repeat 1 20 0 1 663 25 0 0 0 chr2R 10278060 10278085 -10868623 + AT_rich Low_complexity Low_complexity 1 25 0 1 663 251 150 0 0 chr2R 10279812 10279852 -10866856 - DNAREP1_DM LINE Penelope -549 45 6 1 663 26 0 0 0 chr2R 10280064 10280090 -10866618 + AT_rich Low_complexity Low_complexity 1 26 0 1 663 23 0 0 0 chr2R 10280389 10280412 -10866296 + AT_rich Low_complexity Low_complexity 1 23 0 1 663 43601 1 0 1 chr2R 10281791 10286514 -10860194 - DOC LINE Jockey -5 4720 1 1 663 23 0 0 0 chr2R 10292452 10292475 -10854233 + AT_rich Low_complexity Low_complexity 1 23 0 1 663 29 28 0 0 chr2R 10294787 10294823 -10851885 + AT_rich Low_complexity Low_complexity 1 36 0 1 663 228 210 60 36 chr2R 10295632 10295716 -10850992 + ROO_I LTR Pao 652 737 -7519 1 663 26 0 0 0 chr2R 10296579 10296605 -10850103 + AT_rich Low_complexity Low_complexity 1 26 0 1 663 205 109 43 0 chr2R 10303592 10303638 -10843070 + A-rich Low_complexity Low_complexity 2 49 0 1 663 233 200 0 20 chr2R 10303930 10303981 -10842727 - DNAREP1_DM LINE Penelope -540 54 5 1 663 268 191 103 19 chr2R 10307034 10307141 -10839567 - ROO_I LTR Pao -7503 753 638 1 663 297 335 0 7 chr2R 10307144 10307351 -10839357 + (TTG)n Simple_repeat Simple_repeat 1 205 0 1 663 424 312 0 12 chr2R 10307377 10307549 -10839159 + (TTG)n Simple_repeat Simple_repeat 1 170 0 1 663 194 207 0 17 chr2R 10307676 10307735 -10838973 + (CCG)n Simple_repeat Simple_repeat 2 59 0 1 663 207 162 0 0 chr2R 10308365 10308402 -10838306 + GA-rich Low_complexity Low_complexity 1 37 0 1 663 22 0 0 0 chr2R 10311664 10311686 -10835022 + AT_rich Low_complexity Low_complexity 1 22 0 1 663 209 200 0 0 chr2R 10312683 10312733 -10833975 + T-rich Low_complexity Low_complexity 1 50 0 1 663 23 33 0 0 chr2R 10313605 10313635 -10833073 + AT_rich Low_complexity Low_complexity 1 30 0 1 663 288 0 0 0 chr2R 10314091 10314123 -10832585 + (CAGC)n Simple_repeat Simple_repeat 3 34 0 1 663 237 108 0 0 chr2R 10317331 10317368 -10829340 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 663 180 0 0 0 chr2R 10318445 10318465 -10828243 + (CAG)n Simple_repeat Simple_repeat 2 21 0 1 663 47 67 0 0 chr2R 10320004 10320093 -10826615 + AT_rich Low_complexity Low_complexity 1 89 0 1 663 23 0 0 0 chr2R 10320398 10320421 -10826287 + AT_rich Low_complexity Low_complexity 1 23 0 1 663 255 125 0 0 chr2R 10323531 10323571 -10823137 + (CAAAT)n Simple_repeat Simple_repeat 5 44 0 1 663 247 206 15 0 chr2R 10324830 10324898 -10821810 + ROO_I LTR Pao 678 746 -7510 1 663 228 86 0 0 chr2R 10325072 10325107 -10821601 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 663 222 91 0 0 chr2R 10326174 10326207 -10820501 + (CAG)n Simple_repeat Simple_repeat 2 34 0 1 663 222 91 0 0 chr2R 10327402 10327435 -10819273 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 663 41 54 0 32 chr2R 10327889 10327984 -10818724 + AT_rich Low_complexity Low_complexity 1 92 0 1 663 180 179 0 0 chr2R 10328157 10328196 -10818512 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 663 21 36 0 0 chr2R 10328748 10328776 -10817932 + AT_rich Low_complexity Low_complexity 1 28 0 1 663 201 147 0 0 chr2R 10329991 10330025 -10816683 + (GAA)n Simple_repeat Simple_repeat 3 36 0 1 663 235 250 18 0 chr2R 10330144 10330200 -10816508 + (TATG)n Simple_repeat Simple_repeat 3 59 0 1 663 45 0 0 0 chr2R 10330641 10330686 -10816022 + AT_rich Low_complexity Low_complexity 1 45 0 1 663 202 204 0 0 chr2R 10331064 10331108 -10815600 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 663 206 206 0 0 chr2R 10332684 10332718 -10813990 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 663 183 42 0 0 chr2R 10333761 10333785 -10812923 + (AGCTG)n Simple_repeat Simple_repeat 3 26 0 1 663 180 0 0 0 chr2R 10334642 10334662 -10812046 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 663 228 67 0 0 chr2R 10334749 10334779 -10811929 + (ATG)n Simple_repeat Simple_repeat 3 32 0 1 663 198 0 0 0 chr2R 10337064 10337086 -10809622 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 663 246 148 0 0 chr2R 10337502 10337556 -10809152 + (TCCA)n Simple_repeat Simple_repeat 2 55 0 1 663 234 0 0 0 chr2R 10340215 10340241 -10806467 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 663 23 68 0 0 chr2R 10343348 10343392 -10803316 + AT_rich Low_complexity Low_complexity 1 44 0 1 663 180 0 0 0 chr2R 10343787 10343807 -10802901 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1 663 344 240 214 39 chr2R 10344859 10345041 -10801667 - DNAREP1_DM LINE Penelope -11 583 370 1 663 24 32 0 0 chr2R 10345127 10345158 -10801550 + AT_rich Low_complexity Low_complexity 1 31 0 1 663 219 114 0 0 chr2R 10345905 10345940 -10800768 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 663 225 94 0 0 chr2R 10347736 10347768 -10798940 + (CAT)n Simple_repeat Simple_repeat 1 32 0 1 663 202 195 0 0 chr2R 10349055 10349096 -10797612 + (CCCCAG)n Simple_repeat Simple_repeat 5 45 0 1 663 183 129 0 0 chr2R 10349286 10349317 -10797391 + (TCG)n Simple_repeat Simple_repeat 1 31 0 1 663 227 208 0 20 chr2R 10351194 10351243 -10795465 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1 663 204 219 0 0 chr2R 10354373 10354414 -10792294 + (ATG)n Simple_repeat Simple_repeat 1 41 0 1 664 4022 0 0 0 chr2R 10354853 10355281 -10791427 + ROO_LTR LTR Pao 1 428 0 1 664 75049 0 3 1 chr2R 10355281 10363519 -10783189 + ROO_I LTR Pao 1 8256 0 1 664 4022 0 0 0 chr2R 10363519 10363947 -10782761 + ROO_LTR LTR Pao 1 428 0 1 664 23 0 0 0 chr2R 10365474 10365497 -10781211 + AT_rich Low_complexity Low_complexity 1 23 0 1 664 21 36 0 0 chr2R 10365589 10365617 -10781091 + AT_rich Low_complexity Low_complexity 1 28 0 1 664 25 0 0 0 chr2R 10366453 10366478 -10780230 + AT_rich Low_complexity Low_complexity 1 25 0 1 664 200 122 82 0 chr2R 10366947 10366996 -10779712 + (ATG)n Simple_repeat Simple_repeat 3 55 0 1 664 25 31 0 0 chr2R 10367101 10367133 -10779575 + AT_rich Low_complexity Low_complexity 1 32 0 1 664 235 147 0 93 chr2R 10367935 10368010 -10778698 + A-rich Low_complexity Low_complexity 1 68 0 1 664 23 0 0 0 chr2R 10370556 10370579 -10776129 + AT_rich Low_complexity Low_complexity 1 23 0 1 664 207 186 0 0 chr2R 10370652 10370695 -10776013 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 664 27 0 0 0 chr2R 10371139 10371166 -10775542 + AT_rich Low_complexity Low_complexity 1 27 0 1 664 212 139 47 0 chr2R 10372018 10372061 -10774647 + A-rich Low_complexity Low_complexity 5 49 0 1 664 189 94 0 0 chr2R 10372664 10372696 -10774012 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 664 215 191 24 0 chr2R 10373231 10373273 -10773435 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 664 198 0 0 0 chr2R 10375578 10375600 -10771108 + (TAAAAA)n Simple_repeat Simple_repeat 1 22 0 1 664 188 122 24 0 chr2R 10375724 10375765 -10770943 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 1 664 23 54 0 0 chr2R 10376855 10376892 -10769816 + AT_rich Low_complexity Low_complexity 1 37 0 1 664 45 0 0 0 chr2R 10377086 10377131 -10769577 + AT_rich Low_complexity Low_complexity 1 45 0 1 664 21 36 0 0 chr2R 10378050 10378078 -10768630 + AT_rich Low_complexity Low_complexity 1 28 0 1 664 267 191 0 0 chr2R 10378258 10378321 -10768387 + A-rich Low_complexity Low_complexity 1 63 0 1 664 213 94 0 0 chr2R 10380340 10380372 -10766336 + (CGA)n Simple_repeat Simple_repeat 2 33 0 1 664 251 243 0 0 chr2R 10383392 10383466 -10763242 + ROO_I LTR Pao 651 724 -7532 1 664 9675 22 0 1 chr2R 10384948 10386054 -10760654 - PROTOP_A DNA P 0 1105 1 1 664 195 186 0 0 chr2R 10391941 10391984 -10754724 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 664 21 0 0 0 chr2R 10392631 10392652 -10754056 + AT_rich Low_complexity Low_complexity 1 21 0 1 664 373 139 12 25 chr2R 10393182 10393263 -10753445 + (CAG)n Simple_repeat Simple_repeat 1 80 0 1 664 225 163 0 0 chr2R 10395692 10395741 -10750967 + ROO_I LTR Pao 681 729 -7527 1 664 209 300 0 0 chr2R 10395964 10396024 -10750684 + (CAG)n Simple_repeat Simple_repeat 1 60 0 1 664 214 195 0 0 chr2R 10396151 10396192 -10750516 + (CAA)n Simple_repeat Simple_repeat 1 41 0 1 664 371 132 15 0 chr2R 10396205 10396273 -10750435 + (CAG)n Simple_repeat Simple_repeat 3 71 0 1 664 246 149 0 118 chr2R 10396361 10396437 -10750271 + ROO_I LTR Pao 677 743 -7513 1 664 201 94 0 0 chr2R 10397882 10397914 -10748794 + (CAG)n Simple_repeat Simple_repeat 3 34 0 1 664 357 0 0 54 chr2R 10402026 10402082 -10744626 + (CTA)n Simple_repeat Simple_repeat 1 53 0 1 664 22 0 0 0 chr2R 10402268 10402290 -10744418 + AT_rich Low_complexity Low_complexity 1 22 0 1 664 180 97 0 0 chr2R 10402824 10402855 -10743853 + (T)n Simple_repeat Simple_repeat 1 31 0 1 664 186 167 0 0 chr2R 10405580 10405616 -10741092 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 664 201 225 0 0 chr2R 10407747 10407787 -10738921 + G-rich Low_complexity Low_complexity 3 42 0 1 664 183 80 0 0 chr2R 10409532 10409557 -10737151 + (G)n Simple_repeat Simple_repeat 1 25 0 1 664 180 77 0 0 chr2R 10411636 10411662 -10735046 + (CAG)n Simple_repeat Simple_repeat 2 27 0 1 664 32 0 0 0 chr2R 10411759 10411791 -10734917 + AT_rich Low_complexity Low_complexity 1 32 0 1 664 214 169 15 15 chr2R 10414539 10414605 -10732103 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 664 30 45 0 0 chr2R 10414615 10414659 -10732049 + AT_rich Low_complexity Low_complexity 1 44 0 1 664 23 54 0 0 chr2R 10415743 10415780 -10730928 + AT_rich Low_complexity Low_complexity 1 37 0 1 664 35 83 0 0 chr2R 10417904 10417988 -10728720 + AT_rich Low_complexity Low_complexity 1 84 0 1 664 215 140 16 66 chr2R 10418143 10418204 -10728504 + C-rich Low_complexity Low_complexity 6 63 0 1 664 208 200 0 22 chr2R 10419496 10419542 -10727166 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 664 285 89 0 0 chr2R 10421947 10421992 -10724716 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 664 32 26 0 0 chr2R 10422163 10422202 -10724506 + AT_rich Low_complexity Low_complexity 1 39 0 1 664 26 82 0 0 chr2R 10424014 10424075 -10722633 + AT_rich Low_complexity Low_complexity 1 61 0 1 664 238 215 0 110 chr2R 10424348 10424421 -10722287 - DNAREP1_DM LINE Penelope 0 594 530 1 664 386 175 0 0 chr2R 10424648 10424711 -10721997 - DNAREP1_DM LINE Penelope -531 63 1 1 664 228 143 0 0 chr2R 10427716 10427758 -10718950 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 664 28 29 0 0 chr2R 10429092 10429127 -10717581 + AT_rich Low_complexity Low_complexity 1 35 0 1 664 27 0 0 0 chr2R 10434987 10435014 -10711694 + AT_rich Low_complexity Low_complexity 1 27 0 1 664 29 47 0 0 chr2R 10435932 10435975 -10710733 + AT_rich Low_complexity Low_complexity 1 43 0 1 664 219 254 0 0 chr2R 10436807 10436866 -10709842 + T-rich Low_complexity Low_complexity 1 59 0 1 664 181 77 50 25 chr2R 10439123 10439163 -10707545 + (GTTTG)n Simple_repeat Simple_repeat 5 45 0 1 664 200 200 0 0 chr2R 10439267 10439307 -10707401 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 664 221 171 0 0 chr2R 10440788 10440829 -10705879 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 664 183 80 0 0 chr2R 10442573 10442598 -10704110 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 664 21 71 0 0 chr2R 10442970 10443012 -10703696 + AT_rich Low_complexity Low_complexity 1 42 0 1 664 183 80 0 0 chr2R 10443522 10443547 -10703161 + (ATG)n Simple_repeat Simple_repeat 1 25 0 1 664 25 31 0 0 chr2R 10444382 10444414 -10702294 + AT_rich Low_complexity Low_complexity 1 32 0 1 664 219 188 0 0 chr2R 10445211 10445259 -10701449 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 1 664 189 0 0 0 chr2R 10446057 10446078 -10700630 + (TTA)n Simple_repeat Simple_repeat 3 23 0 1 664 25 0 0 0 chr2R 10446078 10446103 -10700605 + AT_rich Low_complexity Low_complexity 1 25 0 1 664 26 50 0 0 chr2R 10446312 10446352 -10700356 + AT_rich Low_complexity Low_complexity 1 40 0 1 664 180 77 0 0 chr2R 10446786 10446812 -10699896 + (T)n Simple_repeat Simple_repeat 1 26 0 1 664 205 171 0 0 chr2R 10447172 10447207 -10699501 + (CAGT)n Simple_repeat Simple_repeat 3 37 0 1 664 206 211 0 0 chr2R 10448437 10448475 -10698233 + (CCGAA)n Simple_repeat Simple_repeat 1 38 0 1 664 292 270 0 0 chr2R 10450902 10450976 -10695732 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 664 180 0 0 0 chr2R 10453508 10453528 -10693180 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 664 192 152 0 0 chr2R 10455867 10455900 -10690808 + (TTCGGG)n Simple_repeat Simple_repeat 6 38 0 1 664 25 75 0 0 chr2R 10460374 10460427 -10686281 + AT_rich Low_complexity Low_complexity 1 53 0 1 664 23 0 0 0 chr2R 10461445 10461468 -10685240 + AT_rich Low_complexity Low_complexity 1 23 0 1 664 206 224 26 26 chr2R 10464871 10464949 -10681759 + T-rich Low_complexity Low_complexity 2 79 0 1 664 21 0 0 0 chr2R 10465554 10465575 -10681133 + AT_rich Low_complexity Low_complexity 1 21 0 1 664 249 108 0 0 chr2R 10473346 10473383 -10673325 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 1 664 252 59 0 0 chr2R 10473548 10473582 -10673126 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 664 235 85 21 21 chr2R 10473879 10473927 -10672781 + (CAAAA)n Simple_repeat Simple_repeat 1 48 0 1 664 22 0 0 0 chr2R 10474048 10474070 -10672638 + AT_rich Low_complexity Low_complexity 1 22 0 1 664 270 56 0 0 chr2R 10475340 10475376 -10671332 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 664 25 0 0 0 chr2R 10476811 10476836 -10669872 + AT_rich Low_complexity Low_complexity 1 25 0 1 664 26 64 0 0 chr2R 10483131 10483178 -10663530 + AT_rich Low_complexity Low_complexity 1 47 0 1 664 243 299 0 0 chr2R 10483815 10483892 -10662816 + (CAT)n Simple_repeat Simple_repeat 3 79 0 1 665 246 32 0 0 chr2R 10491246 10491277 -10655431 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 1 665 22 70 0 0 chr2R 10494632 10494675 -10652033 + AT_rich Low_complexity Low_complexity 1 43 0 1 665 23 68 0 0 chr2R 10494734 10494778 -10651930 + AT_rich Low_complexity Low_complexity 1 44 0 1 665 24 77 0 0 chr2R 10505922 10505974 -10640734 + AT_rich Low_complexity Low_complexity 1 52 0 1 665 33 0 0 0 chr2R 10508934 10508967 -10637741 + AT_rich Low_complexity Low_complexity 1 33 0 1 665 26 0 0 0 chr2R 10518952 10518978 -10627730 + AT_rich Low_complexity Low_complexity 1 26 0 1 665 216 111 0 0 chr2R 10520473 10520509 -10626199 + (ATTCG)n Simple_repeat Simple_repeat 2 37 0 1 665 182 105 0 26 chr2R 10525121 10525160 -10621548 + (TGGG)n Simple_repeat Simple_repeat 4 41 0 1 665 207 0 0 0 chr2R 10527621 10527644 -10619064 + (CAT)n Simple_repeat Simple_repeat 1 23 0 1 665 36 70 0 0 chr2R 10532517 10532588 -10614120 + AT_rich Low_complexity Low_complexity 1 71 0 1 665 25 75 0 0 chr2R 10533713 10533766 -10612942 + AT_rich Low_complexity Low_complexity 1 53 0 1 665 198 0 0 0 chr2R 10536382 10536404 -10610304 + (A)n Simple_repeat Simple_repeat 1 22 0 1 665 181 128 43 0 chr2R 10536490 10536537 -10610171 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 665 21 36 0 0 chr2R 10539101 10539129 -10607579 + AT_rich Low_complexity Low_complexity 1 28 0 1 665 183 80 0 0 chr2R 10539583 10539608 -10607100 + (CGGA)n Simple_repeat Simple_repeat 1 25 0 1 665 244 277 0 0 chr2R 10540488 10540553 -10606155 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 665 21 57 0 0 chr2R 10541789 10541824 -10604884 + AT_rich Low_complexity Low_complexity 1 35 0 1 665 23 0 0 0 chr2R 10543160 10543183 -10603525 + AT_rich Low_complexity Low_complexity 1 23 0 1 665 189 0 0 0 chr2R 10546487 10546508 -10600200 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 665 204 40 0 0 chr2R 10546859 10546884 -10599824 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1 665 216 0 0 0 chr2R 10547823 10547847 -10598861 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 665 25 0 0 0 chr2R 10548791 10548816 -10597892 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 21 0 0 0 chr2R 10550796 10550817 -10595891 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 22 0 0 0 chr2R 10552954 10552976 -10593732 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 245 121 0 0 chr2R 10552978 10553011 -10593697 + DNAREP1_DM LINE Penelope 21 53 -541 1 665 25 0 0 0 chr2R 10556644 10556669 -10590039 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 23 0 0 0 chr2R 10559821 10559844 -10586864 + AT_rich Low_complexity Low_complexity 1 23 0 1 665 201 39 0 0 chr2R 10561230 10561256 -10585452 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 1 665 186 191 0 0 chr2R 10565428 10565470 -10581238 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1 665 55 48 0 0 chr2R 10567087 10567170 -10579538 + AT_rich Low_complexity Low_complexity 1 83 0 1 665 209 301 0 0 chr2R 10568347 10568440 -10578268 + A-rich Low_complexity Low_complexity 1 93 0 1 665 256 246 0 0 chr2R 10570679 10570748 -10575960 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 665 228 139 0 0 chr2R 10571837 10571880 -10574828 + R1_DM LINE R1 679 721 -4635 1 665 25 0 0 0 chr2R 10579346 10579371 -10567337 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 223 175 0 0 chr2R 10579375 10579415 -10567293 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 665 276 240 31 10 chr2R 10579540 10579637 -10567071 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 665 220 200 0 0 chr2R 10579738 10579788 -10566920 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 665 25 31 0 0 chr2R 10580124 10580156 -10566552 + AT_rich Low_complexity Low_complexity 1 32 0 1 665 21 36 0 0 chr2R 10580321 10580349 -10566359 + AT_rich Low_complexity Low_complexity 1 28 0 1 665 216 0 0 0 chr2R 10580768 10580792 -10565916 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 665 22 0 0 0 chr2R 10581959 10581981 -10564727 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 22 0 0 0 chr2R 10582622 10582644 -10564064 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 219 69 0 0 chr2R 10583368 10583397 -10563311 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 665 470 127 0 0 chr2R 10584072 10584143 -10562565 - DNAREP1_DM LINE Penelope 0 594 524 1 665 22 0 0 0 chr2R 10585440 10585462 -10561246 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 22 0 0 0 chr2R 10586471 10586493 -10560215 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 208 220 0 0 chr2R 10586744 10586794 -10559914 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 665 315 179 0 0 chr2R 10588037 10588104 -10558604 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 665 249 182 0 0 chr2R 10588128 10588183 -10558525 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 665 22 56 0 0 chr2R 10590428 10590464 -10556244 + AT_rich Low_complexity Low_complexity 1 36 0 1 665 195 186 0 0 chr2R 10591385 10591428 -10555280 + (CAG)n Simple_repeat Simple_repeat 1 43 0 1 665 216 111 0 0 chr2R 10593910 10593946 -10552762 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 665 21 36 0 0 chr2R 10595323 10595351 -10551357 + AT_rich Low_complexity Low_complexity 1 28 0 1 665 219 154 0 0 chr2R 10599507 10599546 -10547162 + (TGAG)n Simple_repeat Simple_repeat 4 42 0 1 665 312 120 0 0 chr2R 10601923 10601973 -10544735 + (TTG)n Simple_repeat Simple_repeat 1 50 0 1 665 25 65 0 0 chr2R 10602579 10602625 -10544083 + AT_rich Low_complexity Low_complexity 1 46 0 1 665 22 0 0 0 chr2R 10603311 10603333 -10543375 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 288 53 0 0 chr2R 10603429 10603467 -10543241 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 665 22 35 0 0 chr2R 10604608 10604637 -10542071 + AT_rich Low_complexity Low_complexity 1 29 0 1 665 22 80 0 0 chr2R 10607612 10607662 -10539046 + AT_rich Low_complexity Low_complexity 1 50 0 1 665 39 38 0 0 chr2R 10608280 10608333 -10538375 + AT_rich Low_complexity Low_complexity 1 53 0 1 665 25 51 0 0 chr2R 10609596 10609635 -10537073 + AT_rich Low_complexity Low_complexity 1 39 0 1 665 297 222 33 11 chr2R 10609828 10609919 -10536789 + (TTG)n Simple_repeat Simple_repeat 1 93 0 1 665 215 31 0 30 chr2R 10611269 10611302 -10535406 + (GGGAGA)n Simple_repeat Simple_repeat 4 35 0 1 665 198 0 0 0 chr2R 10611839 10611861 -10534847 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1 665 204 135 0 0 chr2R 10612888 10612925 -10533783 + (GGAGA)n Simple_repeat Simple_repeat 4 40 0 1 665 23 0 0 0 chr2R 10616293 10616316 -10530392 + AT_rich Low_complexity Low_complexity 1 23 0 1 666 204 40 0 0 chr2R 10617747 10617772 -10528936 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 666 219 69 0 0 chr2R 10618680 10618709 -10527999 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 666 29 70 0 0 chr2R 10619842 10619899 -10526809 + AT_rich Low_complexity Low_complexity 1 57 0 1 666 205 241 0 36 chr2R 10620598 10620674 -10526034 + A-rich Low_complexity Low_complexity 1 73 0 1 666 189 107 0 0 chr2R 10621617 10621645 -10525063 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 666 189 74 0 0 chr2R 10624453 10624480 -10522228 + (T)n Simple_repeat Simple_repeat 1 27 0 1 666 235 136 34 0 chr2R 10624962 10625021 -10521687 + A-rich Low_complexity Low_complexity 4 64 0 1 666 204 40 0 0 chr2R 10627064 10627089 -10519619 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 666 208 259 0 0 chr2R 10628315 10628369 -10518339 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 666 27 29 0 0 chr2R 10633168 10633202 -10513506 + AT_rich Low_complexity Low_complexity 1 34 0 1 666 25 0 0 0 chr2R 10633278 10633303 -10513405 + AT_rich Low_complexity Low_complexity 1 25 0 1 666 25 0 0 0 chr2R 10635701 10635726 -10510982 + AT_rich Low_complexity Low_complexity 1 25 0 1 666 21 36 0 0 chr2R 10636304 10636332 -10510376 + AT_rich Low_complexity Low_complexity 1 28 0 1 666 23 33 0 0 chr2R 10637507 10637537 -10509171 + AT_rich Low_complexity Low_complexity 1 30 0 1 666 262 203 0 0 chr2R 10641535 10641594 -10505114 + (CTG)n Simple_repeat Simple_repeat 1 59 0 1 666 27 29 0 0 chr2R 10645400 10645434 -10501274 + AT_rich Low_complexity Low_complexity 1 34 0 1 666 28 0 0 0 chr2R 10645466 10645494 -10501214 + AT_rich Low_complexity Low_complexity 1 28 0 1 666 42 48 0 0 chr2R 10647878 10647941 -10498767 + AT_rich Low_complexity Low_complexity 1 63 0 1 666 192 40 0 0 chr2R 10651225 10651250 -10495458 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 666 204 167 0 0 chr2R 10653382 10653430 -10493278 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 666 24 53 0 0 chr2R 10653838 10653876 -10492832 + AT_rich Low_complexity Low_complexity 1 38 0 1 666 32 81 0 0 chr2R 10655009 10655083 -10491625 + AT_rich Low_complexity Low_complexity 1 74 0 1 666 29 0 0 0 chr2R 10655350 10655379 -10491329 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 186 143 0 0 chr2R 10656674 10656709 -10489999 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 666 29 0 0 0 chr2R 10660165 10660194 -10486514 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 22 0 0 0 chr2R 10660839 10660861 -10485847 + AT_rich Low_complexity Low_complexity 1 22 0 1 666 181 83 56 0 chr2R 10661203 10661239 -10485469 + (TTAAA)n Simple_repeat Simple_repeat 3 40 0 1 666 24 0 0 0 chr2R 10661622 10661646 -10485062 + AT_rich Low_complexity Low_complexity 1 24 0 1 666 22 0 0 0 chr2R 10664769 10664791 -10481917 + AT_rich Low_complexity Low_complexity 1 22 0 1 666 186 43 0 0 chr2R 10667733 10667756 -10478952 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 666 201 74 0 0 chr2R 10671167 10671194 -10475514 + (TCC)n Simple_repeat Simple_repeat 3 29 0 1 666 195 42 0 0 chr2R 10674183 10674207 -10472501 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 666 202 109 43 21 chr2R 10677401 10677448 -10469260 + A-rich Low_complexity Low_complexity 6 53 0 1 666 22 80 0 0 chr2R 10677838 10677888 -10468820 + AT_rich Low_complexity Low_complexity 1 50 0 1 666 216 67 0 0 chr2R 10678462 10678492 -10468216 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 666 353 267 33 0 chr2R 10686477 10686597 -10460111 + (CAG)n Simple_repeat Simple_repeat 3 126 0 1 666 42 36 0 0 chr2R 10687309 10687365 -10459343 + AT_rich Low_complexity Low_complexity 1 56 0 1 666 25 31 0 0 chr2R 10688641 10688673 -10458035 + AT_rich Low_complexity Low_complexity 1 32 0 1 666 189 74 0 0 chr2R 10691272 10691299 -10455409 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 666 21 57 0 0 chr2R 10695150 10695185 -10451523 + AT_rich Low_complexity Low_complexity 1 35 0 1 666 23 0 0 0 chr2R 10698550 10698573 -10448135 + AT_rich Low_complexity Low_complexity 1 23 0 1 666 22 35 0 0 chr2R 10700414 10700443 -10446265 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 183 80 0 0 chr2R 10701217 10701242 -10445466 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 666 27 49 0 0 chr2R 10702061 10702102 -10444606 + AT_rich Low_complexity Low_complexity 1 41 0 1 666 31 26 0 0 chr2R 10714036 10714074 -10432634 + AT_rich Low_complexity Low_complexity 1 38 0 1 666 203 184 0 0 chr2R 10715038 10715076 -10431632 + T-rich Low_complexity Low_complexity 1 38 0 1 666 204 111 0 0 chr2R 10716310 10716346 -10430362 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 666 28 86 0 0 chr2R 10717539 10717609 -10429099 + AT_rich Low_complexity Low_complexity 1 70 0 1 666 26 50 0 0 chr2R 10725409 10725449 -10421259 + AT_rich Low_complexity Low_complexity 1 40 0 1 666 21 0 0 0 chr2R 10727891 10727912 -10418796 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 22 35 0 0 chr2R 10730382 10730411 -10416297 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 243 232 0 0 chr2R 10733989 10734045 -10412663 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 666 21 0 0 0 chr2R 10742614 10742635 -10404073 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 31 68 0 0 chr2R 10742672 10742731 -10403977 + AT_rich Low_complexity Low_complexity 1 59 0 1 667 24 0 0 0 chr2R 10748364 10748388 -10398320 + AT_rich Low_complexity Low_complexity 1 24 0 1 667 200 167 0 0 chr2R 10752043 10752073 -10394635 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 667 29 28 0 0 chr2R 10753884 10753920 -10392788 + AT_rich Low_complexity Low_complexity 1 36 0 1 667 26 50 0 0 chr2R 10754441 10754481 -10392227 + AT_rich Low_complexity Low_complexity 1 40 0 1 667 23 33 0 0 chr2R 10757123 10757153 -10389555 + AT_rich Low_complexity Low_complexity 1 30 0 1 667 270 136 0 102 chr2R 10758891 10758940 -10387768 - DNAREP1_DM LINE Penelope -534 60 17 1 667 25 51 0 0 chr2R 10769200 10769239 -10377469 + AT_rich Low_complexity Low_complexity 1 39 0 1 667 2932 12 0 0 chr2R 10776768 10777089 -10369619 - MAX_LTR LTR Pao 0 321 1 1 667 73689 2 2 1 chr2R 10777089 10784997 -10361711 - MAX_I LTR Pao 0 7914 1 1 667 2910 12 0 0 chr2R 10784997 10785318 -10361390 - MAX_LTR LTR Pao 0 321 1 1 667 204 67 0 0 chr2R 10786900 10786930 -10359778 + (A)n Simple_repeat Simple_repeat 1 30 0 1 667 23 0 0 0 chr2R 10788701 10788724 -10357984 + AT_rich Low_complexity Low_complexity 1 23 0 1 667 24 0 0 0 chr2R 10790539 10790563 -10356145 + AT_rich Low_complexity Low_complexity 1 24 0 1 667 22 0 0 0 chr2R 10795089 10795111 -10351597 + AT_rich Low_complexity Low_complexity 1 22 0 1 667 237 197 0 0 chr2R 10795820 10795881 -10350827 + GA-rich Low_complexity Low_complexity 2 62 0 1 667 22 56 0 0 chr2R 10796322 10796358 -10350350 + AT_rich Low_complexity Low_complexity 1 36 0 1 667 306 20 0 56 chr2R 10799255 10799309 -10347399 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 667 21 0 0 0 chr2R 10799408 10799429 -10347279 + AT_rich Low_complexity Low_complexity 1 21 0 1 667 24 53 0 0 chr2R 10802695 10802733 -10343975 + AT_rich Low_complexity Low_complexity 1 38 0 1 667 186 103 0 0 chr2R 10807079 10807108 -10339600 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 667 208 147 0 0 chr2R 10807863 10807897 -10338811 + (A)n Simple_repeat Simple_repeat 1 34 0 1 667 22 56 0 0 chr2R 10809093 10809129 -10337579 + AT_rich Low_complexity Low_complexity 1 36 0 1 667 217 132 0 0 chr2R 10810111 10810149 -10336559 + (A)n Simple_repeat Simple_repeat 1 38 0 1 667 31 68 0 0 chr2R 10810481 10810540 -10336168 + AT_rich Low_complexity Low_complexity 1 59 0 1 667 22 0 0 0 chr2R 10810667 10810689 -10336019 + AT_rich Low_complexity Low_complexity 1 22 0 1 667 186 118 0 0 chr2R 10811165 10811199 -10335509 + (T)n Simple_repeat Simple_repeat 1 34 0 1 667 202 143 24 0 chr2R 10811596 10811638 -10335070 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1 667 213 200 0 0 chr2R 10813943 10813983 -10332725 + (CTG)n Simple_repeat Simple_repeat 3 42 0 1 667 214 269 28 28 chr2R 10814070 10814177 -10332531 + (TTG)n Simple_repeat Simple_repeat 2 108 0 1 667 22 0 0 0 chr2R 10814947 10814969 -10331739 + AT_rich Low_complexity Low_complexity 1 22 0 1 667 25 31 0 0 chr2R 10816131 10816163 -10330545 + AT_rich Low_complexity Low_complexity 1 32 0 1 667 25 65 0 0 chr2R 10816343 10816389 -10330319 + AT_rich Low_complexity Low_complexity 1 46 0 1 667 26 74 0 0 chr2R 10818297 10818351 -10328357 + AT_rich Low_complexity Low_complexity 1 54 0 1 667 28 0 0 0 chr2R 10819996 10820024 -10326684 + AT_rich Low_complexity Low_complexity 1 28 0 1 667 22 0 0 0 chr2R 10820101 10820123 -10326585 + AT_rich Low_complexity Low_complexity 1 22 0 1 667 21 0 0 0 chr2R 10821106 10821127 -10325581 + AT_rich Low_complexity Low_complexity 1 21 0 1 667 32 95 0 0 chr2R 10828266 10828361 -10318347 + AT_rich Low_complexity Low_complexity 1 95 0 1 667 195 42 0 0 chr2R 10829978 10830002 -10316706 + (CAGAA)n Simple_repeat Simple_repeat 1 24 0 1 667 24 32 0 0 chr2R 10830666 10830697 -10316011 + AT_rich Low_complexity Low_complexity 1 31 0 1 667 21 0 0 0 chr2R 10830927 10830948 -10315760 + AT_rich Low_complexity Low_complexity 1 21 0 1 667 203 61 30 0 chr2R 10831589 10831622 -10315086 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 667 21 57 0 0 chr2R 10832511 10832546 -10314162 + AT_rich Low_complexity Low_complexity 1 35 0 1 667 22 35 0 0 chr2R 10832600 10832629 -10314079 + AT_rich Low_complexity Low_complexity 1 29 0 1 667 377 173 0 0 chr2R 10833668 10833749 -10312959 - ROO_I LTR Pao -7518 738 658 1 667 226 270 0 16 chr2R 10833765 10833829 -10312879 + (CTG)n Simple_repeat Simple_repeat 2 64 0 1 667 21 0 0 0 chr2R 10836836 10836857 -10309851 + AT_rich Low_complexity Low_complexity 1 21 0 1 667 208 258 15 0 chr2R 10838489 10838555 -10308153 + A-rich Low_complexity Low_complexity 3 69 0 1 667 189 154 0 0 chr2R 10840853 10840892 -10305816 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 667 195 69 0 0 chr2R 10841911 10841940 -10304768 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 667 23 0 0 0 chr2R 10844102 10844125 -10302583 + AT_rich Low_complexity Low_complexity 1 23 0 1 667 235 213 13 13 chr2R 10844637 10844713 -10301995 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 667 189 74 0 0 chr2R 10844854 10844881 -10301827 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 667 200 200 0 0 chr2R 10844898 10844938 -10301770 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 667 25 83 0 0 chr2R 10845292 10845352 -10301356 + AT_rich Low_complexity Low_complexity 1 60 0 1 667 246 136 0 0 chr2R 10845825 10845869 -10300839 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 667 36 0 0 0 chr2R 10846158 10846194 -10300514 + AT_rich Low_complexity Low_complexity 1 36 0 1 667 24 32 0 0 chr2R 10846248 10846279 -10300429 + AT_rich Low_complexity Low_complexity 1 31 0 1 667 183 42 0 0 chr2R 10846622 10846646 -10300062 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 667 28 0 0 0 chr2R 10849461 10849489 -10297219 + AT_rich Low_complexity Low_complexity 1 28 0 1 667 22 0 0 0 chr2R 10850957 10850979 -10295729 + AT_rich Low_complexity Low_complexity 1 22 0 1 667 249 33 0 0 chr2R 10852382 10852412 -10294296 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 667 231 152 0 0 chr2R 10853310 10853356 -10293352 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 667 198 171 0 0 chr2R 10854422 10854463 -10292245 + (TCCG)n Simple_repeat Simple_repeat 4 44 0 1 667 195 69 0 0 chr2R 10856107 10856136 -10290572 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 667 180 0 0 0 chr2R 10858187 10858207 -10288501 + (CTTA)n Simple_repeat Simple_repeat 2 21 0 1 667 21 36 0 0 chr2R 10858746 10858774 -10287934 + AT_rich Low_complexity Low_complexity 1 28 0 1 667 226 270 0 0 chr2R 10859373 10859447 -10287261 + (CACCAT)n Simple_repeat Simple_repeat 4 77 0 1 667 24 53 0 0 chr2R 10861055 10861093 -10285615 + AT_rich Low_complexity Low_complexity 1 38 0 1 667 28 0 0 0 chr2R 10861526 10861554 -10285154 + AT_rich Low_complexity Low_complexity 1 28 0 1 667 276 91 0 0 chr2R 10864538 10864582 -10282126 + (ATTCG)n Simple_repeat Simple_repeat 2 45 0 1 667 24 32 0 0 chr2R 10865592 10865623 -10281085 + AT_rich Low_complexity Low_complexity 1 31 0 1 667 215 222 0 22 chr2R 10865855 10865947 -10280761 + (CAG)n Simple_repeat Simple_repeat 1 90 0 1 667 26 50 0 0 chr2R 10867557 10867597 -10279111 + AT_rich Low_complexity Low_complexity 1 40 0 1 667 200 143 0 23 chr2R 10872143 10872186 -10274522 + (CAT)n Simple_repeat Simple_repeat 1 42 0 1 667 225 0 0 0 chr2R 10874462 10874487 -10272221 + (A)n Simple_repeat Simple_repeat 1 25 0 1 667 22 0 0 0 chr2R 10875166 10875188 -10271520 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 36 23 0 0 chr2R 10881554 10881597 -10265111 + AT_rich Low_complexity Low_complexity 1 43 0 1 668 24 0 0 0 chr2R 10882096 10882120 -10264588 + AT_rich Low_complexity Low_complexity 1 24 0 1 668 186 133 0 0 chr2R 10882636 10882666 -10264042 + (CTA)n Simple_repeat Simple_repeat 1 30 0 1 668 204 111 0 0 chr2R 10883233 10883269 -10263439 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 668 221 200 40 0 chr2R 10883333 10883383 -10263325 + (CCCA)n Simple_repeat Simple_repeat 2 53 0 1 668 296 78 0 38 chr2R 10883538 10883591 -10263117 + (TTG)n Simple_repeat Simple_repeat 3 53 0 1 668 27 49 0 0 chr2R 10884217 10884258 -10262450 + AT_rich Low_complexity Low_complexity 1 41 0 1 668 24 53 0 0 chr2R 10885183 10885221 -10261487 + AT_rich Low_complexity Low_complexity 1 38 0 1 668 205 156 22 22 chr2R 10887633 10887679 -10259029 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 668 252 100 0 0 chr2R 10887775 10887815 -10258893 + (AGTTG)n Simple_repeat Simple_repeat 4 43 0 1 668 334 307 18 0 chr2R 10888538 10888652 -10258056 + (TCTG)n Simple_repeat Simple_repeat 4 119 0 1 668 23 54 0 0 chr2R 10889083 10889120 -10257588 + AT_rich Low_complexity Low_complexity 1 37 0 1 668 512 128 382 2 chr2R 10891129 10891264 -10255444 + DNAREP1_DM LINE Penelope 431 594 0 1 668 21 0 0 0 chr2R 10891337 10891358 -10255350 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 2037 8 0 20 chr2R 10892305 10892556 -10254152 - LINEJ1_DM LINE Jockey 0 5020 4775 1 668 309 89 0 0 chr2R 10893745 10893790 -10252918 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 1 668 21 0 0 0 chr2R 10894202 10894223 -10252485 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 213 94 0 0 chr2R 10894685 10894717 -10251991 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 668 216 189 0 0 chr2R 10896197 10896234 -10250474 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 668 183 100 0 0 chr2R 10896384 10896414 -10250294 + (CAGAA)n Simple_repeat Simple_repeat 5 34 0 1 668 309 182 0 0 chr2R 10896555 10896632 -10250076 + ROO_I LTR Pao 644 720 -7536 1 668 252 0 0 0 chr2R 10899021 10899049 -10247659 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 1 668 210 71 0 0 chr2R 10899222 10899250 -10247458 + (TGAG)n Simple_repeat Simple_repeat 3 30 0 1 668 183 184 0 0 chr2R 10899863 10899901 -10246807 + (CTAG)n Simple_repeat Simple_repeat 2 39 0 1 668 24 0 0 0 chr2R 10900868 10900892 -10245816 + AT_rich Low_complexity Low_complexity 1 24 0 1 668 224 232 0 0 chr2R 10901897 10901953 -10244755 + A-rich Low_complexity Low_complexity 1 56 0 1 668 3131 20 0 3 chr2R 10903016 10903373 -10243335 - MDG1_LTR LTR Gypsy 0 442 87 1 668 423 100 0 0 chr2R 10903373 10903443 -10243265 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 668 57216 6 21 3 chr2R 10903459 10909940 -10236768 - MDG1_I LTR Gypsy 0 6596 1 1 668 3131 20 0 3 chr2R 10909940 10910297 -10236411 - MDG1_LTR LTR Gypsy 0 442 87 1 668 423 100 0 0 chr2R 10910297 10910367 -10236341 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 668 204 67 0 0 chr2R 10910955 10910985 -10235723 + (GAGTG)n Simple_repeat Simple_repeat 5 34 0 1 668 229 179 89 0 chr2R 10913347 10913403 -10233305 + Stalker2_LTR LTR Gypsy 225 285 -139 1 668 25 0 0 0 chr2R 10916958 10916983 -10229725 + AT_rich Low_complexity Low_complexity 1 25 0 1 668 23 0 0 0 chr2R 10920060 10920083 -10226625 + AT_rich Low_complexity Low_complexity 1 23 0 1 668 231 88 0 0 chr2R 10920209 10920243 -10226465 + (CAA)n Simple_repeat Simple_repeat 1 34 0 1 668 195 129 0 0 chr2R 10921220 10921251 -10225457 + (CAT)n Simple_repeat Simple_repeat 1 31 0 1 668 207 114 0 0 chr2R 10921395 10921430 -10225278 + (GCTG)n Simple_repeat Simple_repeat 4 38 0 1 668 225 139 0 0 chr2R 10923035 10923078 -10223630 + (CGAAT)n Simple_repeat Simple_repeat 2 44 0 1 668 28 0 0 0 chr2R 10925240 10925268 -10221440 + AT_rich Low_complexity Low_complexity 1 28 0 1 668 222 62 0 0 chr2R 10928878 10928910 -10217798 + (A)n Simple_repeat Simple_repeat 1 32 0 1 668 23 0 0 0 chr2R 10929240 10929263 -10217445 + AT_rich Low_complexity Low_complexity 1 23 0 1 668 22 0 0 0 chr2R 10930283 10930305 -10216403 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 279 0 0 0 chr2R 10930716 10930747 -10215961 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1 668 228 271 0 17 chr2R 10931122 10931182 -10215526 + G-rich Low_complexity Low_complexity 1 59 0 1 668 287 206 65 11 chr2R 10931333 10931426 -10215282 - ROO_I LTR Pao -7527 729 632 1 668 213 154 0 0 chr2R 10931530 10931569 -10215139 + (CTG)n Simple_repeat Simple_repeat 1 39 0 1 668 189 121 0 0 chr2R 10931790 10931823 -10214885 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 668 180 111 0 0 chr2R 10934927 10934954 -10211754 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 668 32 0 0 0 chr2R 10935963 10935995 -10210713 + AT_rich Low_complexity Low_complexity 1 32 0 1 668 239 274 0 0 chr2R 10936314 10936376 -10210332 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 668 222 118 0 0 chr2R 10937484 10937518 -10209190 + (CATTT)n Simple_repeat Simple_repeat 3 36 0 1 668 204 40 0 0 chr2R 10939819 10939844 -10206864 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 668 204 158 0 0 chr2R 10940021 10940059 -10206649 + (CAACT)n Simple_repeat Simple_repeat 1 38 0 1 668 213 39 0 0 chr2R 10940070 10940096 -10206612 + (TTCGG)n Simple_repeat Simple_repeat 4 29 0 1 668 235 211 0 0 chr2R 10944841 10944898 -10201810 + GA-rich Low_complexity Low_complexity 1 57 0 1 668 206 227 0 0 chr2R 10946355 10946399 -10200309 + (CCAA)n Simple_repeat Simple_repeat 1 44 0 1 668 27 0 0 0 chr2R 10948451 10948478 -10198230 + AT_rich Low_complexity Low_complexity 1 27 0 1 668 21 0 0 0 chr2R 10948821 10948842 -10197866 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 203 143 0 45 chr2R 10950574 10950618 -10196090 + T-rich Low_complexity Low_complexity 1 42 0 1 668 21 36 0 0 chr2R 10951906 10951934 -10194774 + AT_rich Low_complexity Low_complexity 1 28 0 1 668 21 0 0 0 chr2R 10956399 10956420 -10190288 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 231 36 0 0 chr2R 10956641 10956669 -10190039 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 668 180 97 0 0 chr2R 10957145 10957176 -10189532 + (TTGGGG)n Simple_repeat Simple_repeat 5 35 0 1 668 36 23 0 0 chr2R 10957739 10957782 -10188926 + AT_rich Low_complexity Low_complexity 1 43 0 1 668 186 71 0 0 chr2R 10960311 10960339 -10186369 + (GCTG)n Simple_repeat Simple_repeat 4 31 0 1 668 23 0 0 0 chr2R 10961755 10961778 -10184930 + AT_rich Low_complexity Low_complexity 1 23 0 1 668 205 184 0 0 chr2R 10962385 10962423 -10184285 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 668 230 301 0 0 chr2R 10962882 10962965 -10183743 + T-rich Low_complexity Low_complexity 1 83 0 1 668 222 37 0 0 chr2R 10967894 10967921 -10178787 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 668 206 229 0 20 chr2R 10969042 10969091 -10177617 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 668 204 40 0 0 chr2R 10971281 10971306 -10175402 + (CAGC)n Simple_repeat Simple_repeat 2 26 0 1 668 22 0 0 0 chr2R 10971577 10971599 -10175109 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 3368 5 7 7 chr2R 10972538 10972952 -10173756 + DM297_LTR LTR Gypsy 1 414 0 1 668 51078 7 1 0 chr2R 10972952 10979116 -10167592 + DM297_I LTR Gypsy 1 6167 0 1 668 3368 5 7 7 chr2R 10979116 10979530 -10167178 + DM297_LTR LTR Gypsy 1 414 0 1 668 23 68 0 0 chr2R 10979643 10979687 -10167021 + AT_rich Low_complexity Low_complexity 1 44 0 1 668 231 196 18 18 chr2R 10980588 10980645 -10166063 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 668 24 67 0 0 chr2R 10981570 10981615 -10165093 + AT_rich Low_complexity Low_complexity 1 45 0 1 668 213 132 0 0 chr2R 10982694 10982732 -10163976 + (CATCC)n Simple_repeat Simple_repeat 3 40 0 1 668 28 0 0 0 chr2R 10983013 10983041 -10163667 + AT_rich Low_complexity Low_complexity 1 28 0 1 668 25 31 0 0 chr2R 10984941 10984973 -10161735 + AT_rich Low_complexity Low_complexity 1 32 0 1 668 21 0 0 0 chr2R 10985152 10985173 -10161535 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 31 0 0 0 chr2R 10986662 10986693 -10160015 + AT_rich Low_complexity Low_complexity 1 31 0 1 668 25 31 0 0 chr2R 10990777 10990809 -10155899 + AT_rich Low_complexity Low_complexity 1 32 0 1 668 21 0 0 0 chr2R 10992013 10992034 -10154674 + GC_rich Low_complexity Low_complexity 1 21 0 1 668 210 128 0 0 chr2R 10992516 10992555 -10154153 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 668 215 220 20 0 chr2R 10992626 10992676 -10154032 + GA-rich Low_complexity Low_complexity 3 53 0 1 668 212 246 15 0 chr2R 10992898 10992963 -10153745 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 668 242 228 28 73 chr2R 10993758 10993867 -10152841 - ROO_I LTR Pao -7515 741 638 1 668 25 65 0 0 chr2R 10997748 10997794 -10148914 + AT_rich Low_complexity Low_complexity 1 46 0 1 668 25 0 0 0 chr2R 10997898 10997923 -10148785 + AT_rich Low_complexity Low_complexity 1 25 0 1 668 230 148 0 47 chr2R 11000430 11000494 -10146214 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 668 198 128 0 0 chr2R 11001254 11001293 -10145415 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 668 21 0 0 0 chr2R 11002343 11002364 -10144344 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 35 0 0 0 chr2R 11002467 11002502 -10144206 + AT_rich Low_complexity Low_complexity 1 35 0 1 668 205 239 30 0 chr2R 11004228 11004295 -10142413 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 668 200 128 0 25 chr2R 11005003 11005043 -10141665 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 668 207 167 0 0 chr2R 11005829 11005871 -10140837 + (CAT)n Simple_repeat Simple_repeat 2 43 0 1 668 3799 5 0 0 chr2R 11006877 11007294 -10139414 + TIRANT_LTR LTR Gypsy 1 417 0 1 83 68092 2 0 1 chr2R 11007294 11014884 -10131824 + TIRANT_I LTR Gypsy 1 7692 0 1 669 3799 5 0 0 chr2R 11014884 11015301 -10131407 + TIRANT_LTR LTR Gypsy 1 417 0 1 669 206 217 0 0 chr2R 11017073 11017119 -10129589 + CT-rich Low_complexity Low_complexity 1 46 0 1 669 207 69 0 0 chr2R 11018919 11018948 -10127760 + (CCA)n Simple_repeat Simple_repeat 1 29 0 1 669 27 29 0 0 chr2R 11021766 11021800 -10124908 + AT_rich Low_complexity Low_complexity 1 34 0 1 669 34 42 0 0 chr2R 11022390 11022438 -10124270 + AT_rich Low_complexity Low_complexity 1 48 0 1 669 186 143 0 0 chr2R 11023922 11023957 -10122751 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 669 201 147 0 0 chr2R 11024083 11024117 -10122591 + (GATTG)n Simple_repeat Simple_repeat 4 37 0 1 669 227 200 0 0 chr2R 11024149 11024199 -10122509 + (TTG)n Simple_repeat Simple_repeat 1 50 0 1 669 206 135 27 0 chr2R 11026436 11026473 -10120235 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 669 195 295 0 0 chr2R 11027998 11028076 -10118632 + (CAG)n Simple_repeat Simple_repeat 3 80 0 1 669 218 187 5 71 chr2R 11028220 11028333 -10118375 + A-rich Low_complexity Low_complexity 1 105 0 1 669 210 278 0 0 chr2R 11028562 11028616 -10118092 + (CGG)n Simple_repeat Simple_repeat 1 54 0 1 669 193 118 19 19 chr2R 11029873 11029925 -10116783 + (CAG)n Simple_repeat Simple_repeat 1 52 0 1 669 261 83 0 0 chr2R 11029963 11029999 -10116709 + (CAA)n Simple_repeat Simple_repeat 2 37 0 1 669 27 49 0 0 chr2R 11031047 11031088 -10115620 + AT_rich Low_complexity Low_complexity 1 41 0 1 669 24 32 0 0 chr2R 11032260 11032291 -10114417 + AT_rich Low_complexity Low_complexity 1 31 0 1 669 22 0 0 0 chr2R 11033241 11033263 -10113445 + AT_rich Low_complexity Low_complexity 1 22 0 1 669 32 81 0 0 chr2R 11033320 11033394 -10113314 + AT_rich Low_complexity Low_complexity 1 74 0 1 669 21 57 0 0 chr2R 11038113 11038148 -10108560 + AT_rich Low_complexity Low_complexity 1 35 0 1 669 22 0 0 0 chr2R 11038883 11038905 -10107803 + AT_rich Low_complexity Low_complexity 1 22 0 1 669 218 233 27 0 chr2R 11039096 11039169 -10107539 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 669 200 111 22 0 chr2R 11040364 11040409 -10106299 + (TAAAAA)n Simple_repeat Simple_repeat 2 47 0 1 669 192 77 0 0 chr2R 11042118 11042144 -10104564 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 669 24 0 0 0 chr2R 11042682 11042706 -10104002 + AT_rich Low_complexity Low_complexity 1 24 0 1 669 210 167 0 0 chr2R 11044157 11044193 -10102515 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 669 218 125 21 0 chr2R 11050080 11050128 -10096580 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 669 23 33 0 0 chr2R 11052145 11052175 -10094533 + AT_rich Low_complexity Low_complexity 1 30 0 1 669 22 0 0 0 chr2R 11065497 11065519 -10081189 + AT_rich Low_complexity Low_complexity 1 22 0 1 669 40 0 0 0 chr2R 11068380 11068420 -10078288 + AT_rich Low_complexity Low_complexity 1 40 0 1 669 219 234 0 0 chr2R 11070953 11071000 -10075708 + A-rich Low_complexity Low_complexity 4 50 0 1 669 32 0 0 0 chr2R 11074991 11075023 -10071685 + AT_rich Low_complexity Low_complexity 1 32 0 1 669 207 195 0 0 chr2R 11077400 11077441 -10069267 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 1 669 21 0 0 0 chr2R 11080826 11080847 -10065861 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 23 0 0 0 chr2R 11084151 11084174 -10062534 + AT_rich Low_complexity Low_complexity 1 23 0 1 669 34 24 0 0 chr2R 11088897 11088938 -10057770 + AT_rich Low_complexity Low_complexity 1 41 0 1 669 25 65 0 0 chr2R 11101201 11101247 -10045461 + AT_rich Low_complexity Low_complexity 1 46 0 1 669 23 54 0 0 chr2R 11103747 11103784 -10042924 + AT_rich Low_complexity Low_complexity 1 37 0 1 669 213 208 0 0 chr2R 11103825 11103897 -10042811 + (CAGAGA)n Simple_repeat Simple_repeat 5 76 0 1 669 191 215 15 0 chr2R 11111105 11111170 -10035538 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 669 222 37 0 0 chr2R 11113354 11113381 -10033327 + (GTCTG)n Simple_repeat Simple_repeat 1 27 0 1 669 204 182 0 0 chr2R 11119368 11119412 -10027296 + (CAGAC)n Simple_repeat Simple_repeat 1 44 0 1 669 258 95 0 0 chr2R 11119547 11119589 -10027119 + (ATTCG)n Simple_repeat Simple_repeat 1 42 0 1 669 216 158 0 0 chr2R 11119696 11119734 -10026974 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 669 198 0 0 0 chr2R 11120079 11120101 -10026607 + (GAAA)n Simple_repeat Simple_repeat 3 24 0 1 669 214 183 0 66 chr2R 11120636 11120712 -10025996 + (CTG)n Simple_repeat Simple_repeat 3 73 0 1 669 189 94 0 0 chr2R 11121602 11121634 -10025074 + (CTG)n Simple_repeat Simple_repeat 2 33 0 1 669 22 35 0 0 chr2R 11122599 11122628 -10024080 + AT_rich Low_complexity Low_complexity 1 29 0 1 669 288 256 0 0 chr2R 11123445 11123523 -10023185 + (CTG)n Simple_repeat Simple_repeat 2 79 0 1 669 318 169 0 0 chr2R 11124642 11124707 -10022001 + (TTTG)n Simple_repeat Simple_repeat 4 68 0 1 669 223 186 0 0 chr2R 11125272 11125315 -10021393 + A-rich Low_complexity Low_complexity 1 43 0 1 669 185 65 32 0 chr2R 11126331 11126362 -10020346 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1 669 192 40 0 0 chr2R 11127578 11127603 -10019105 + (CAG)n Simple_repeat Simple_repeat 1 25 0 1 669 56 71 0 0 chr2R 11129779 11129891 -10016817 + AT_rich Low_complexity Low_complexity 1 112 0 1 669 21 36 0 0 chr2R 11130261 11130289 -10016419 + AT_rich Low_complexity Low_complexity 1 28 0 1 669 241 237 17 0 chr2R 11134554 11134613 -10012095 + (CTG)n Simple_repeat Simple_repeat 1 60 0 1 669 215 231 0 0 chr2R 11135834 11135886 -10010822 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 669 21 0 0 0 chr2R 11136557 11136578 -10010130 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 22 70 0 0 chr2R 11138797 11138840 -10007868 + AT_rich Low_complexity Low_complexity 1 43 0 1 670 33 43 0 0 chr2R 11141433 11141480 -10005228 + AT_rich Low_complexity Low_complexity 1 47 0 1 670 21 36 0 0 chr2R 11143633 11143661 -10003047 + AT_rich Low_complexity Low_complexity 1 28 0 1 670 244 187 279 36 chr2R 11145521 11145632 -10001076 - DNAREP1_DM LINE Penelope 0 594 457 1 670 292 193 18 0 chr2R 11145750 11145807 -10000901 - DNAREP1_DM LINE Penelope -535 59 2 1 670 25 0 0 0 chr2R 11146202 11146227 -10000481 + AT_rich Low_complexity Low_complexity 1 25 0 1 670 23 68 0 0 chr2R 11150307 11150351 -9996357 + AT_rich Low_complexity Low_complexity 1 44 0 1 670 220 329 0 0 chr2R 11152093 11152163 -9994545 + (CCG)n Simple_repeat Simple_repeat 2 71 0 1 670 210 37 0 0 chr2R 11156929 11156956 -9989752 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 670 27 29 0 0 chr2R 11158788 11158822 -9987886 + AT_rich Low_complexity Low_complexity 1 34 0 1 670 185 108 27 0 chr2R 11161579 11161616 -9985092 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 1 670 21 0 0 0 chr2R 11164132 11164153 -9982555 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 22 35 0 0 chr2R 11167700 11167729 -9978979 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 30 59 0 0 chr2R 11170714 11170765 -9975943 + AT_rich Low_complexity Low_complexity 1 51 0 1 670 22 0 0 0 chr2R 11175122 11175144 -9971564 + AT_rich Low_complexity Low_complexity 1 22 0 1 670 218 329 14 0 chr2R 11176678 11176751 -9969957 + (TATG)n Simple_repeat Simple_repeat 4 77 0 1 670 22 56 0 0 chr2R 11179557 11179593 -9967115 + AT_rich Low_complexity Low_complexity 1 36 0 1 670 195 42 0 0 chr2R 11183302 11183326 -9963382 + (CAGC)n Simple_repeat Simple_repeat 1 24 0 1 670 21 0 0 0 chr2R 11184206 11184227 -9962481 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 201 39 0 0 chr2R 11186396 11186422 -9960286 + (CAG)n Simple_repeat Simple_repeat 2 27 0 1 670 23 0 0 0 chr2R 11189859 11189882 -9956826 + AT_rich Low_complexity Low_complexity 1 23 0 1 670 183 80 0 0 chr2R 11192706 11192731 -9953977 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 670 26 0 0 0 chr2R 11196434 11196460 -9950248 + AT_rich Low_complexity Low_complexity 1 26 0 1 670 674 233 24 10 chr2R 11197094 11197302 -9949406 - M4DM DNA Transib -263 1172 962 1 670 23 0 0 0 chr2R 11197308 11197331 -9949377 + AT_rich Low_complexity Low_complexity 1 23 0 1 670 27 0 0 0 chr2R 11197439 11197466 -9949242 + AT_rich Low_complexity Low_complexity 1 27 0 1 670 204 168 9 122 chr2R 11198801 11198916 -9947792 + A-rich Low_complexity Low_complexity 2 103 0 1 670 24 0 0 0 chr2R 11200615 11200639 -9946069 + AT_rich Low_complexity Low_complexity 1 24 0 1 670 24 53 0 0 chr2R 11205404 11205442 -9941266 + AT_rich Low_complexity Low_complexity 1 38 0 1 670 21 36 0 0 chr2R 11205670 11205698 -9941010 + AT_rich Low_complexity Low_complexity 1 28 0 1 670 28 0 0 0 chr2R 11209742 11209770 -9936938 + AT_rich Low_complexity Low_complexity 1 28 0 1 670 206 227 0 0 chr2R 11210530 11210574 -9936134 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 670 21 0 0 0 chr2R 11212908 11212929 -9933779 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 34 24 0 0 chr2R 11212981 11213022 -9933686 + AT_rich Low_complexity Low_complexity 1 41 0 1 670 374 181 12 24 chr2R 11213177 11213262 -9933446 - DNAREP1_DM LINE Penelope -60 534 451 1 670 25 0 0 0 chr2R 11214348 11214373 -9932335 + AT_rich Low_complexity Low_complexity 1 25 0 1 670 22 56 0 0 chr2R 11214440 11214476 -9932232 + AT_rich Low_complexity Low_complexity 1 36 0 1 670 27 0 0 0 chr2R 11215001 11215028 -9931680 + AT_rich Low_complexity Low_complexity 1 27 0 1 670 31 26 0 0 chr2R 11216464 11216502 -9930206 + AT_rich Low_complexity Low_complexity 1 38 0 1 670 25 65 0 0 chr2R 11217636 11217682 -9929026 + AT_rich Low_complexity Low_complexity 1 46 0 1 670 39 68 0 0 chr2R 11217757 11217831 -9928877 + AT_rich Low_complexity Low_complexity 1 74 0 1 670 201 158 0 26 chr2R 11220245 11220284 -9926424 + (CCCGAA)n Simple_repeat Simple_repeat 5 42 0 1 670 23 54 0 0 chr2R 11220874 11220911 -9925797 + AT_rich Low_complexity Low_complexity 1 37 0 1 670 25 0 0 0 chr2R 11224220 11224245 -9922463 + AT_rich Low_complexity Low_complexity 1 25 0 1 670 23 33 0 0 chr2R 11225720 11225750 -9920958 + AT_rich Low_complexity Low_complexity 1 30 0 1 670 23 54 0 0 chr2R 11225834 11225871 -9920837 + AT_rich Low_complexity Low_complexity 1 37 0 1 670 3799 5 0 0 chr2R 11228251 11228668 -9918040 + TIRANT_LTR LTR Gypsy 1 417 0 1 670 71156 0 0 0 chr2R 11228668 11236360 -9910348 + TIRANT_I LTR Gypsy 1 7692 0 1 670 3799 5 0 0 chr2R 11236360 11236777 -9909931 + TIRANT_LTR LTR Gypsy 1 417 0 1 670 216 158 0 0 chr2R 11236929 11236967 -9909741 + (CAA)n Simple_repeat Simple_repeat 1 38 0 1 670 207 100 0 0 chr2R 11237009 11237039 -9909669 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 1 670 21 57 0 0 chr2R 11237313 11237348 -9909360 + AT_rich Low_complexity Low_complexity 1 35 0 1 670 183 42 0 0 chr2R 11238607 11238631 -9908077 + (TTTTTA)n Simple_repeat Simple_repeat 3 26 0 1 670 255 133 0 0 chr2R 11239458 11239503 -9907205 + (ACTG)n Simple_repeat Simple_repeat 3 47 0 1 670 24 32 0 0 chr2R 11241856 11241887 -9904821 + AT_rich Low_complexity Low_complexity 1 31 0 1 670 27 0 0 0 chr2R 11246802 11246829 -9899879 + AT_rich Low_complexity Low_complexity 1 27 0 1 670 222 37 0 0 chr2R 11247454 11247481 -9899227 + (TATTG)n Simple_repeat Simple_repeat 4 30 0 1 670 216 0 0 0 chr2R 11250782 11250806 -9895902 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 670 216 291 0 0 chr2R 11251192 11251247 -9895461 + G-rich Low_complexity Low_complexity 4 58 0 1 670 246 128 0 0 chr2R 11251481 11251520 -9895188 + (CAGTT)n Simple_repeat Simple_repeat 2 40 0 1 670 198 0 0 0 chr2R 11255578 11255600 -9891108 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 670 21 36 0 0 chr2R 11259547 11259575 -9887133 + AT_rich Low_complexity Low_complexity 1 28 0 1 670 355 89 0 0 chr2R 11260046 11260091 -9886617 - PROTOP DNA P -49 4431 4387 1 670 3598 42 135 1 chr2R 11260090 11260742 -9885966 - PROTOP DNA P -3717 763 23 1 670 25 0 0 0 chr2R 11268624 11268649 -9878059 + AT_rich Low_complexity Low_complexity 1 25 0 1 671 204 162 27 0 chr2R 11285922 11285959 -9860749 + (TAGA)n Simple_repeat Simple_repeat 3 40 0 1 671 216 135 0 0 chr2R 11288776 11288813 -9857895 + (CGGT)n Simple_repeat Simple_repeat 4 40 0 1 671 289 207 11 33 chr2R 11297430 11297520 -9849188 + ROO_I LTR Pao 644 731 -7525 1 671 201 240 0 0 chr2R 11297680 11297730 -9848978 + (TTG)n Simple_repeat Simple_repeat 3 52 0 1 671 24 0 0 0 chr2R 11301527 11301551 -9845157 + AT_rich Low_complexity Low_complexity 1 24 0 1 671 22 56 0 0 chr2R 11308668 11308704 -9838004 + AT_rich Low_complexity Low_complexity 1 36 0 1 671 21 0 0 0 chr2R 11311712 11311733 -9834975 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 330 80 0 0 chr2R 11312589 11312639 -9834069 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 671 26 30 0 0 chr2R 11312990 11313023 -9833685 + AT_rich Low_complexity Low_complexity 1 33 0 1 671 24 32 0 0 chr2R 11313983 11314014 -9832694 + AT_rich Low_complexity Low_complexity 1 31 0 1 671 246 62 0 0 chr2R 11316471 11316503 -9830205 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 671 24 53 0 0 chr2R 11317742 11317780 -9828928 + AT_rich Low_complexity Low_complexity 1 38 0 1 671 189 74 0 0 chr2R 11322786 11322813 -9823895 + (GTATG)n Simple_repeat Simple_repeat 3 29 0 1 671 210 246 18 0 chr2R 11324427 11324484 -9822224 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 671 261 197 0 0 chr2R 11325774 11325845 -9820863 + (ACTG)n Simple_repeat Simple_repeat 2 72 0 1 671 23 0 0 0 chr2R 11326645 11326668 -9820040 + AT_rich Low_complexity Low_complexity 1 23 0 1 671 225 0 0 0 chr2R 11326963 11326988 -9819720 + (A)n Simple_repeat Simple_repeat 1 25 0 1 671 183 188 0 0 chr2R 11327293 11327341 -9819367 + CT-rich Low_complexity Low_complexity 5 52 0 1 671 23 0 0 0 chr2R 11330294 11330317 -9816391 + AT_rich Low_complexity Low_complexity 1 23 0 1 671 185 130 0 42 chr2R 11338870 11338918 -9807790 + (CCCA)n Simple_repeat Simple_repeat 1 46 0 1 671 25 0 0 0 chr2R 11339388 11339413 -9807295 + AT_rich Low_complexity Low_complexity 1 25 0 1 671 23 0 0 0 chr2R 11339426 11339449 -9807259 + AT_rich Low_complexity Low_complexity 1 23 0 1 671 198 150 0 0 chr2R 11339815 11339855 -9806853 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 671 202 211 0 0 chr2R 11340531 11340569 -9806139 + (CACTC)n Simple_repeat Simple_repeat 5 42 0 1 671 216 97 0 0 chr2R 11344996 11345027 -9801681 + (ATG)n Simple_repeat Simple_repeat 2 32 0 1 671 212 152 0 42 chr2R 11345201 11345249 -9801459 + A-rich Low_complexity Low_complexity 1 46 0 1 671 207 100 39 39 chr2R 11345652 11345704 -9801004 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 671 180 0 0 0 chr2R 11346290 11346310 -9800398 + (A)n Simple_repeat Simple_repeat 1 20 0 1 671 375 89 0 0 chr2R 11346551 11346607 -9800101 + (CAG)n Simple_repeat Simple_repeat 3 58 0 1 671 260 234 0 30 chr2R 11348544 11348610 -9798098 + (CAG)n Simple_repeat Simple_repeat 1 64 0 1 671 189 0 0 0 chr2R 11348871 11348892 -9797816 + (CAA)n Simple_repeat Simple_repeat 3 23 0 1 671 201 157 0 56 chr2R 11351920 11351974 -9794734 + A-rich Low_complexity Low_complexity 6 56 0 1 671 180 77 0 0 chr2R 11357052 11357078 -9789630 + (TCG)n Simple_repeat Simple_repeat 2 27 0 1 671 22 80 0 0 chr2R 11359596 11359646 -9787062 + AT_rich Low_complexity Low_complexity 1 50 0 1 671 287 157 14 0 chr2R 11360163 11360233 -9786475 + (CTG)n Simple_repeat Simple_repeat 1 71 0 1 671 209 246 29 14 chr2R 11362003 11362073 -9784635 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 1 671 219 204 0 20 chr2R 11362010 11362060 -9784648 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 671 180 97 0 0 chr2R 11362442 11362473 -9784235 + (CAGT)n Simple_repeat Simple_repeat 3 33 0 1 671 295 115 0 0 chr2R 11362532 11362584 -9784124 - ROO_I LTR Pao -7556 700 649 1 671 263 247 14 0 chr2R 11366825 11366898 -9779810 + (TCTCTG)n Simple_repeat Simple_repeat 1 74 0 1 671 189 107 0 0 chr2R 11367054 11367082 -9779626 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 671 290 98 0 19 chr2R 11367205 11367257 -9779451 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 671 186 103 0 0 chr2R 11369863 11369892 -9776816 + (TTG)n Simple_repeat Simple_repeat 1 29 0 1 671 36 40 0 0 chr2R 11370548 11370598 -9776110 + AT_rich Low_complexity Low_complexity 1 50 0 1 671 224 218 18 0 chr2R 11371058 11371113 -9775595 + GA-rich Low_complexity Low_complexity 1 56 0 1 671 229 196 0 0 chr2R 11375322 11375373 -9771335 - ROO_I LTR Pao -7565 691 641 1 671 271 242 0 0 chr2R 11375611 11375673 -9771035 + (CTG)n Simple_repeat Simple_repeat 1 62 0 1 671 380 208 0 28 chr2R 11375897 11376006 -9770702 - ROO_I LTR Pao -7513 743 638 1 671 192 77 0 0 chr2R 11376577 11376603 -9770105 + (TCC)n Simple_repeat Simple_repeat 2 27 0 1 671 195 42 0 0 chr2R 11376693 11376717 -9769991 + (TTC)n Simple_repeat Simple_repeat 2 25 0 1 671 21 0 0 0 chr2R 11397289 11397310 -9749398 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 25 0 0 0 chr2R 11398614 11398639 -9748069 + AT_rich Low_complexity Low_complexity 1 25 0 1 671 32 43 0 0 chr2R 11399058 11399104 -9747604 + AT_rich Low_complexity Low_complexity 1 46 0 1 671 197 33 0 32 chr2R 11400677 11400708 -9746000 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 1 672 29 0 0 0 chr2R 11405217 11405246 -9741462 + AT_rich Low_complexity Low_complexity 1 29 0 1 672 243 177 16 31 chr2R 11405818 11405882 -9740826 + (TTTAG)n Simple_repeat Simple_repeat 4 66 0 1 672 21 57 0 0 chr2R 11409465 11409500 -9737208 + AT_rich Low_complexity Low_complexity 1 35 0 1 672 239 204 18 18 chr2R 11410276 11410331 -9736377 + (CAG)n Simple_repeat Simple_repeat 1 55 0 1 672 202 118 0 29 chr2R 11417932 11417967 -9728741 + (CATCC)n Simple_repeat Simple_repeat 5 38 0 1 672 23 0 0 0 chr2R 11418959 11418982 -9727726 + AT_rich Low_complexity Low_complexity 1 23 0 1 672 36 0 0 0 chr2R 11420045 11420081 -9726627 + AT_rich Low_complexity Low_complexity 1 36 0 1 672 21 0 0 0 chr2R 11420894 11420915 -9725793 + AT_rich Low_complexity Low_complexity 1 21 0 1 672 23 33 0 0 chr2R 11423051 11423081 -9723627 + AT_rich Low_complexity Low_complexity 1 30 0 1 672 401 261 0 21 chr2R 11432424 11432565 -9714143 + (CTG)n Simple_repeat Simple_repeat 1 138 0 1 672 202 194 0 0 chr2R 11433019 11433055 -9713653 + CT-rich Low_complexity Low_complexity 2 37 0 1 672 330 98 0 0 chr2R 11438278 11438329 -9708379 + (CATCT)n Simple_repeat Simple_repeat 4 54 0 1 672 234 136 0 0 chr2R 11438696 11438740 -9707968 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 672 219 88 0 0 chr2R 11442328 11442362 -9704346 + (T)n Simple_repeat Simple_repeat 1 34 0 1 672 38 39 0 0 chr2R 11453531 11453583 -9693125 + AT_rich Low_complexity Low_complexity 1 52 0 1 672 24 32 0 0 chr2R 11453923 11453954 -9692754 + AT_rich Low_complexity Low_complexity 1 31 0 1 672 40 59 0 0 chr2R 11456085 11456153 -9690555 + AT_rich Low_complexity Low_complexity 1 68 0 1 672 195 42 0 0 chr2R 11464717 11464741 -9681967 + (GGA)n Simple_repeat Simple_repeat 3 26 0 1 672 23 0 0 0 chr2R 11465861 11465884 -9680824 + AT_rich Low_complexity Low_complexity 1 23 0 1 672 240 35 0 0 chr2R 11468946 11468975 -9677733 + (GACTG)n Simple_repeat Simple_repeat 5 33 0 1 672 240 86 0 0 chr2R 11470024 11470059 -9676649 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 672 243 61 0 0 chr2R 11470144 11470177 -9676531 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 672 180 0 0 0 chr2R 11475905 11475925 -9670783 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 672 29 47 0 0 chr2R 11476657 11476700 -9670008 + AT_rich Low_complexity Low_complexity 1 43 0 1 672 248 200 0 0 chr2R 11477608 11477653 -9669055 - R1_DM LINE R1 -4632 724 680 1 672 188 86 0 28 chr2R 11477747 11477783 -9668925 + (GGA)n Simple_repeat Simple_repeat 1 35 0 1 672 21 36 0 0 chr2R 11478312 11478340 -9668368 + AT_rich Low_complexity Low_complexity 1 28 0 1 672 183 100 0 0 chr2R 11478934 11478964 -9667744 + (TTTCG)n Simple_repeat Simple_repeat 5 34 0 1 672 186 43 0 0 chr2R 11479706 11479729 -9666979 + (CTG)n Simple_repeat Simple_repeat 2 24 0 1 672 21 0 0 0 chr2R 11481497 11481518 -9665190 + AT_rich Low_complexity Low_complexity 1 21 0 1 672 336 64 0 0 chr2R 11485529 11485576 -9661132 + (CAT)n Simple_repeat Simple_repeat 1 47 0 1 672 290 123 0 17 chr2R 11486490 11486548 -9660160 + (CAA)n Simple_repeat Simple_repeat 1 57 0 1 672 24 32 0 0 chr2R 11487405 11487436 -9659272 + AT_rich Low_complexity Low_complexity 1 31 0 1 672 25 31 0 0 chr2R 11487464 11487496 -9659212 + AT_rich Low_complexity Low_complexity 1 32 0 1 672 23 0 0 0 chr2R 11487550 11487573 -9659135 + AT_rich Low_complexity Low_complexity 1 23 0 1 672 224 250 24 12 chr2R 11489515 11489600 -9657108 + (TTTG)n Simple_repeat Simple_repeat 4 89 0 1 672 220 125 0 24 chr2R 11493817 11493858 -9652850 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 1 672 24 32 0 0 chr2R 11495534 11495565 -9651143 + AT_rich Low_complexity Low_complexity 1 31 0 1 672 25 31 0 0 chr2R 11495828 11495860 -9650848 + AT_rich Low_complexity Low_complexity 1 32 0 1 672 198 0 0 0 chr2R 11496146 11496168 -9650540 + (A)n Simple_repeat Simple_repeat 1 22 0 1 672 211 276 40 0 chr2R 11496847 11496923 -9649785 + (TATATG)n Simple_repeat Simple_repeat 4 82 0 1 672 23 0 0 0 chr2R 11498009 11498032 -9648676 + AT_rich Low_complexity Low_complexity 1 23 0 1 672 240 149 0 0 chr2R 11498527 11498574 -9648134 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 672 189 74 0 0 chr2R 11506986 11507013 -9639695 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 672 300 53 0 0 chr2R 11507752 11507790 -9638918 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1 672 22 35 0 0 chr2R 11508196 11508225 -9638483 + AT_rich Low_complexity Low_complexity 1 29 0 1 672 261 128 0 0 chr2R 11509396 11509443 -9637265 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 672 189 74 0 0 chr2R 11510361 11510388 -9636320 + (ACCG)n Simple_repeat Simple_repeat 1 27 0 1 672 273 119 0 0 chr2R 11511546 11511588 -9635120 + (CATCG)n Simple_repeat Simple_repeat 3 44 0 1 672 198 0 0 0 chr2R 11512890 11512912 -9633796 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 672 210 91 0 0 chr2R 11513847 11513880 -9632828 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 672 219 146 0 0 chr2R 11513932 11513973 -9632735 + (CAGC)n Simple_repeat Simple_repeat 3 43 0 1 672 264 100 0 0 chr2R 11515120 11515160 -9631548 + (CAGAC)n Simple_repeat Simple_repeat 4 43 0 1 672 207 0 0 0 chr2R 11516384 11516407 -9630301 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 672 207 167 0 0 chr2R 11518690 11518732 -9627976 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 672 186 43 0 0 chr2R 11522231 11522254 -9624454 + (CAGCT)n Simple_repeat Simple_repeat 2 24 0 1 672 21 0 0 0 chr2R 11524379 11524400 -9622308 + AT_rich Low_complexity Low_complexity 1 21 0 1 672 204 211 0 0 chr2R 11525864 11525902 -9620806 + (CTCTG)n Simple_repeat Simple_repeat 5 42 0 1 672 229 182 36 0 chr2R 11525924 11525979 -9620729 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 672 186 71 0 0 chr2R 11527317 11527345 -9619363 + (CGAAT)n Simple_repeat Simple_repeat 3 30 0 1 672 27 0 0 0 chr2R 11527871 11527898 -9618810 + AT_rich Low_complexity Low_complexity 1 27 0 1 672 215 146 73 0 chr2R 11528779 11528820 -9617888 + (GAGTG)n Simple_repeat Simple_repeat 3 46 0 1 672 216 86 0 0 chr2R 11528889 11528924 -9617784 + (CGATA)n Simple_repeat Simple_repeat 2 36 0 1 672 348 119 0 0 chr2R 11529042 11529101 -9617607 + (TGGA)n Simple_repeat Simple_repeat 1 59 0 1 672 216 253 11 11 chr2R 11529942 11530030 -9616678 + (CTG)n Simple_repeat Simple_repeat 3 90 0 1 672 243 0 0 0 chr2R 11531506 11531533 -9615175 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 673 291 93 0 0 chr2R 11536359 11536402 -9610306 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 673 28 29 0 0 chr2R 11537372 11537407 -9609301 + AT_rich Low_complexity Low_complexity 1 35 0 1 673 411 119 0 0 chr2R 11540104 11540171 -9606537 + (CAG)n Simple_repeat Simple_repeat 1 67 0 1 673 198 143 0 0 chr2R 11541265 11541300 -9605408 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 673 221 291 11 11 chr2R 11542554 11542641 -9604067 + (CA)n Simple_repeat Simple_repeat 2 88 0 1 673 26 30 0 0 chr2R 11544827 11544860 -9601848 + AT_rich Low_complexity Low_complexity 1 33 0 1 673 21 0 0 0 chr2R 11546026 11546047 -9600661 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 206 81 27 0 chr2R 11546914 11546951 -9599757 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 1 673 192 40 0 0 chr2R 11547483 11547508 -9599200 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 673 210 150 0 0 chr2R 11549190 11549230 -9597478 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 673 216 240 0 0 chr2R 11549861 11549911 -9596797 + (CTG)n Simple_repeat Simple_repeat 3 52 0 1 673 216 97 0 0 chr2R 11549927 11549958 -9596750 + (CTG)n Simple_repeat Simple_repeat 1 31 0 1 673 24 0 0 0 chr2R 11557364 11557388 -9589320 + AT_rich Low_complexity Low_complexity 1 24 0 1 673 249 109 0 0 chr2R 11557828 11557874 -9588834 + (CAGG)n Simple_repeat Simple_repeat 3 48 0 1 673 240 86 0 0 chr2R 11560131 11560166 -9586542 + (TCCG)n Simple_repeat Simple_repeat 3 37 0 1 673 21 0 0 0 chr2R 11560541 11560562 -9586146 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 21 71 0 0 chr2R 11560719 11560761 -9585947 + AT_rich Low_complexity Low_complexity 1 42 0 1 673 206 219 0 0 chr2R 11563785 11563826 -9582882 + CT-rich Low_complexity Low_complexity 1 41 0 1 673 33 25 0 0 chr2R 11568359 11568399 -9578309 + AT_rich Low_complexity Low_complexity 1 40 0 1 673 27 62 0 0 chr2R 11570135 11570183 -9576525 + AT_rich Low_complexity Low_complexity 1 48 0 1 673 270 195 0 144 chr2R 11576996 11577086 -9569622 + DNAREP1_DM LINE Penelope 518 594 0 1 673 29 60 0 0 chr2R 11578485 11578535 -9568173 + AT_rich Low_complexity Low_complexity 1 50 0 1 673 497 153 331 74 chr2R 11580540 11580700 -9566008 - DNAREP1_DM LINE Penelope -2 592 392 1 673 271 255 157 19 chr2R 11580735 11580843 -9565865 - DNAREP1_DM LINE Penelope -471 123 1 1 673 23 0 0 0 chr2R 11581927 11581950 -9564758 + AT_rich Low_complexity Low_complexity 1 23 0 1 673 26 64 0 0 chr2R 11583118 11583165 -9563543 + AT_rich Low_complexity Low_complexity 1 47 0 1 673 26 50 0 0 chr2R 11584071 11584111 -9562597 + AT_rich Low_complexity Low_complexity 1 40 0 1 673 21 0 0 0 chr2R 11585456 11585477 -9561231 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 33 85 0 0 chr2R 11585811 11585893 -9560815 + AT_rich Low_complexity Low_complexity 1 82 0 1 673 28 0 0 0 chr2R 11587704 11587732 -9558976 + AT_rich Low_complexity Low_complexity 1 28 0 1 673 218 85 42 21 chr2R 11588473 11588521 -9558187 + (TTA)n Simple_repeat Simple_repeat 3 51 0 1 673 36 53 0 0 chr2R 11590500 11590557 -9556151 + AT_rich Low_complexity Low_complexity 1 57 0 1 673 23 33 0 0 chr2R 11591708 11591738 -9554970 + AT_rich Low_complexity Low_complexity 1 30 0 1 673 226 234 0 0 chr2R 11593267 11593314 -9553394 + (CATA)n Simple_repeat Simple_repeat 3 49 0 1 673 240 200 0 0 chr2R 11594503 11594563 -9552145 + (CCCGAA)n Simple_repeat Simple_repeat 2 61 0 1 673 192 77 0 0 chr2R 11595946 11595972 -9550736 + (TAA)n Simple_repeat Simple_repeat 3 28 0 1 673 183 114 0 0 chr2R 11596870 11596905 -9549803 + (T)n Simple_repeat Simple_repeat 1 35 0 1 673 249 83 0 0 chr2R 11600770 11600806 -9545902 + (AGGGGG)n Simple_repeat Simple_repeat 4 39 0 1 673 243 61 0 0 chr2R 11605658 11605691 -9541017 + (ATTCG)n Simple_repeat Simple_repeat 1 33 0 1 673 189 107 0 0 chr2R 11606733 11606761 -9539947 + (CATA)n Simple_repeat Simple_repeat 4 31 0 1 673 215 262 33 0 chr2R 11607545 11607606 -9539102 + (TGGG)n Simple_repeat Simple_repeat 2 64 0 1 673 21 89 0 0 chr2R 11608330 11608386 -9538322 + AT_rich Low_complexity Low_complexity 1 56 0 1 673 264 161 0 0 chr2R 11609658 11609720 -9536988 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 673 375 156 62 62 chr2R 11610531 11610627 -9536081 - Transib-N1_DM DNA Transib -418 96 1 1 673 207 146 0 0 chr2R 11612528 11612569 -9534139 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 673 23 0 0 0 chr2R 11613326 11613349 -9533359 + AT_rich Low_complexity Low_complexity 1 23 0 1 673 244 218 0 0 chr2R 11616871 11616926 -9529782 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 673 208 139 0 0 chr2R 11617885 11617921 -9528787 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 673 21 0 0 0 chr2R 11619394 11619415 -9527293 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 22 0 0 0 chr2R 11619549 11619571 -9527137 + AT_rich Low_complexity Low_complexity 1 22 0 1 673 203 171 0 0 chr2R 11622212 11622253 -9524455 + (TTAGGG)n Simple_repeat Simple_repeat 1 41 0 1 673 198 143 0 0 chr2R 11622540 11622575 -9524133 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 673 264 154 0 0 chr2R 11622760 11622812 -9523896 + (CAG)n Simple_repeat Simple_repeat 3 54 0 1 673 198 118 0 0 chr2R 11622925 11622959 -9523749 + (CAG)n Simple_repeat Simple_repeat 2 35 0 1 673 186 43 0 0 chr2R 11623065 11623088 -9523620 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1 673 318 106 0 0 chr2R 11623318 11623365 -9523343 + (CAG)n Simple_repeat Simple_repeat 2 48 0 1 673 297 75 0 0 chr2R 11623537 11623577 -9523131 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1 673 419 151 32 0 chr2R 11623676 11623769 -9522939 + ROO_I LTR Pao 640 735 -7521 1 673 237 108 0 0 chr2R 11624052 11624089 -9522619 + (CAG)n Simple_repeat Simple_repeat 3 39 0 1 673 201 250 0 0 chr2R 11624114 11624158 -9522550 + (CAG)n Simple_repeat Simple_repeat 2 45 0 1 673 286 262 12 0 chr2R 11624184 11624268 -9522440 + C-rich Low_complexity Low_complexity 4 88 0 1 673 244 214 0 0 chr2R 11628624 11628680 -9518028 + (CAG)n Simple_repeat Simple_repeat 3 58 0 1 673 21 0 0 0 chr2R 11629554 11629575 -9517133 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 327 49 0 0 chr2R 11631343 11631384 -9515324 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 673 225 65 0 0 chr2R 11631701 11631732 -9514976 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 673 243 0 0 0 chr2R 11632274 11632301 -9514407 + (CCAA)n Simple_repeat Simple_repeat 3 29 0 1 673 296 83 0 20 chr2R 11632514 11632563 -9514145 + (GTATG)n Simple_repeat Simple_repeat 3 50 0 1 673 189 0 0 0 chr2R 11637325 11637346 -9509362 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 673 22 0 0 0 chr2R 11637864 11637886 -9508822 + AT_rich Low_complexity Low_complexity 1 22 0 1 673 203 245 20 0 chr2R 11638184 11638233 -9508475 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 673 251 213 0 32 chr2R 11638366 11638429 -9508279 + (CAG)n Simple_repeat Simple_repeat 3 63 0 1 673 226 254 0 0 chr2R 11639924 11639979 -9506729 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 673 261 0 0 0 chr2R 11640864 11640893 -9505815 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 673 189 0 0 0 chr2R 11644164 11644185 -9502523 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 673 192 158 0 0 chr2R 11644792 11644830 -9501878 + (CAT)n Simple_repeat Simple_repeat 1 38 0 1 673 23 33 0 0 chr2R 11647932 11647962 -9498746 + AT_rich Low_complexity Low_complexity 1 30 0 1 673 31 44 0 0 chr2R 11648039 11648084 -9498624 + AT_rich Low_complexity Low_complexity 1 45 0 1 673 212 114 45 0 chr2R 11649411 11649455 -9497253 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 673 180 0 0 0 chr2R 11649884 11649904 -9496804 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 673 34 0 0 0 chr2R 11650784 11650818 -9495890 + AT_rich Low_complexity Low_complexity 1 34 0 1 673 195 42 0 0 chr2R 11653224 11653248 -9493460 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 673 271 242 16 62 chr2R 11654877 11655005 -9491703 + (TTG)n Simple_repeat Simple_repeat 1 122 0 1 673 216 97 0 0 chr2R 11657759 11657790 -9488918 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 673 248 169 28 0 chr2R 11659908 11659979 -9486729 + (GTTTG)n Simple_repeat Simple_repeat 2 74 0 1 673 246 217 0 0 chr2R 11660556 11660625 -9486083 + (TTG)n Simple_repeat Simple_repeat 1 69 0 1 673 247 192 19 19 chr2R 11660688 11660741 -9485967 + (CTG)n Simple_repeat Simple_repeat 1 53 0 1 673 294 210 0 36 chr2R 11662164 11662248 -9484460 - ROO_I LTR Pao -7522 734 654 1 673 202 262 0 0 chr2R 11662766 11662808 -9483900 + (CCG)n Simple_repeat Simple_repeat 2 43 0 1 674 208 200 13 13 chr2R 11667672 11667748 -9478960 + (TTG)n Simple_repeat Simple_repeat 3 78 0 1 674 26 0 0 0 chr2R 11668141 11668167 -9478541 + AT_rich Low_complexity Low_complexity 1 26 0 1 674 216 214 0 0 chr2R 11671196 11671238 -9475470 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 674 210 143 0 0 chr2R 11672351 11672386 -9474322 + (CGAAT)n Simple_repeat Simple_repeat 3 37 0 1 674 312 27 0 0 chr2R 11674066 11674103 -9472605 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 674 203 61 30 0 chr2R 11677273 11677306 -9469402 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 674 219 36 0 0 chr2R 11678902 11678930 -9467778 + (CAT)n Simple_repeat Simple_repeat 2 29 0 1 674 351 121 0 0 chr2R 11680214 11680272 -9466436 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 1 674 208 317 0 0 chr2R 11680993 11681053 -9465655 + (CTGGGG)n Simple_repeat Simple_repeat 1 60 0 1 674 276 130 0 0 chr2R 11683675 11683721 -9462987 + (TTCGG)n Simple_repeat Simple_repeat 5 50 0 1 674 207 200 0 0 chr2R 11685881 11685926 -9460782 + CT-rich Low_complexity Low_complexity 6 50 0 1 674 23 0 0 0 chr2R 11692517 11692540 -9454168 + AT_rich Low_complexity Low_complexity 1 23 0 1 674 200 194 0 0 chr2R 11692545 11692581 -9454127 + (GAGTG)n Simple_repeat Simple_repeat 3 38 0 1 674 363 89 0 0 chr2R 11694850 11694906 -9451802 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 674 21 0 0 0 chr2R 11695658 11695679 -9451029 + AT_rich Low_complexity Low_complexity 1 21 0 1 674 31 0 0 0 chr2R 11698938 11698969 -9447739 + AT_rich Low_complexity Low_complexity 1 31 0 1 674 207 69 0 0 chr2R 11700257 11700286 -9446422 + (T)n Simple_repeat Simple_repeat 1 29 0 1 674 227 114 0 22 chr2R 11702265 11702310 -9444398 + (ATTCG)n Simple_repeat Simple_repeat 3 46 0 1 674 204 219 0 0 chr2R 11703487 11703528 -9443180 + (CGAAA)n Simple_repeat Simple_repeat 4 44 0 1 674 22 35 0 0 chr2R 11703591 11703620 -9443088 + AT_rich Low_complexity Low_complexity 1 29 0 1 674 25 31 0 0 chr2R 11705278 11705310 -9441398 + AT_rich Low_complexity Low_complexity 1 32 0 1 674 28 0 0 0 chr2R 11706499 11706527 -9440181 + AT_rich Low_complexity Low_complexity 1 28 0 1 674 200 195 33 33 chr2R 11706650 11706740 -9439968 + (TTTA)n Simple_repeat Simple_repeat 4 93 0 1 674 281 250 12 0 chr2R 11708740 11708824 -9437884 + DNAREP1_DM LINE Penelope 109 193 -401 1 674 39 92 0 0 chr2R 11709198 11709307 -9437401 + AT_rich Low_complexity Low_complexity 1 109 0 1 674 209 197 0 47 chr2R 11709435 11709499 -9437209 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1 674 27 49 0 0 chr2R 11710607 11710648 -9436060 + AT_rich Low_complexity Low_complexity 1 41 0 1 674 209 171 0 0 chr2R 11712165 11712200 -9434508 + (CACCAT)n Simple_repeat Simple_repeat 3 37 0 1 674 258 132 0 0 chr2R 11713345 11713398 -9433310 + (GAGTG)n Simple_repeat Simple_repeat 5 57 0 1 674 24 0 0 0 chr2R 11714221 11714245 -9432463 + AT_rich Low_complexity Low_complexity 1 24 0 1 674 26 0 0 0 chr2R 11715846 11715872 -9430836 + AT_rich Low_complexity Low_complexity 1 26 0 1 674 219 146 0 0 chr2R 11718565 11718606 -9428102 + (CAATC)n Simple_repeat Simple_repeat 1 41 0 1 674 192 40 0 0 chr2R 11718736 11718761 -9427947 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1 674 22 0 0 0 chr2R 11719429 11719451 -9427257 + AT_rich Low_complexity Low_complexity 1 22 0 1 674 28 0 0 0 chr2R 11720802 11720830 -9425878 + AT_rich Low_complexity Low_complexity 1 28 0 1 674 234 116 0 0 chr2R 11723767 11723810 -9422898 + (GGA)n Simple_repeat Simple_repeat 2 44 0 1 674 39 38 0 0 chr2R 11724798 11724851 -9421857 + AT_rich Low_complexity Low_complexity 1 53 0 1 674 197 108 0 26 chr2R 11727906 11727944 -9418764 + (GCTG)n Simple_repeat Simple_repeat 3 39 0 1 674 24 0 0 0 chr2R 11735784 11735808 -9410900 + AT_rich Low_complexity Low_complexity 1 24 0 1 674 39 50 0 0 chr2R 11735843 11735903 -9410805 + AT_rich Low_complexity Low_complexity 1 60 0 1 674 192 40 0 0 chr2R 11736543 11736568 -9410140 + (CGAAA)n Simple_repeat Simple_repeat 1 25 0 1 674 241 246 0 0 chr2R 11736604 11736661 -9410047 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 674 212 204 36 18 chr2R 11737241 11737296 -9409412 + A-rich Low_complexity Low_complexity 1 56 0 1 674 28 29 0 0 chr2R 11737590 11737625 -9409083 + AT_rich Low_complexity Low_complexity 1 35 0 1 674 204 208 42 0 chr2R 11740864 11740912 -9405796 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 1 674 225 0 0 0 chr2R 11741576 11741601 -9405107 + (TATTG)n Simple_repeat Simple_repeat 3 27 0 1 674 369 0 0 0 chr2R 11742446 11742487 -9404221 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 674 295 106 43 0 chr2R 11743263 11743310 -9403398 + DNAREP1_DM LINE Penelope 512 560 -34 1 674 390 176 85 38 chr2R 11743311 11743417 -9403291 + DNAREP1_DM LINE Penelope 256 366 -228 1 674 23 0 0 0 chr2R 11745519 11745542 -9401166 + AT_rich Low_complexity Low_complexity 1 23 0 1 674 215 237 51 0 chr2R 11749071 11749130 -9397578 + (ATTCG)n Simple_repeat Simple_repeat 1 62 0 1 674 30 0 0 0 chr2R 11751808 11751838 -9394870 + AT_rich Low_complexity Low_complexity 1 30 0 1 674 24 0 0 0 chr2R 11756742 11756766 -9389942 + AT_rich Low_complexity Low_complexity 1 24 0 1 674 21 0 0 0 chr2R 11757253 11757274 -9389434 + AT_rich Low_complexity Low_complexity 1 21 0 1 674 21 71 0 0 chr2R 11757328 11757370 -9389338 + AT_rich Low_complexity Low_complexity 1 42 0 1 674 247 261 8 57 chr2R 11757398 11757520 -9389188 + (CATATA)n Simple_repeat Simple_repeat 3 118 0 1 674 206 121 0 0 chr2R 11758630 11758663 -9388045 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 674 205 270 0 0 chr2R 11760556 11760619 -9386089 + (CAT)n Simple_repeat Simple_repeat 2 64 0 1 674 24 32 0 0 chr2R 11770833 11770864 -9375844 + AT_rich Low_complexity Low_complexity 1 31 0 1 674 215 61 0 29 chr2R 11773216 11773250 -9373458 + (ATTTG)n Simple_repeat Simple_repeat 2 34 0 1 674 195 42 0 0 chr2R 11775486 11775510 -9371198 + (CATA)n Simple_repeat Simple_repeat 3 26 0 1 674 203 61 0 29 chr2R 11776426 11776460 -9370248 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 1 674 25 0 0 0 chr2R 11782785 11782810 -9363898 + AT_rich Low_complexity Low_complexity 1 25 0 1 674 234 184 0 0 chr2R 11784214 11784263 -9362445 + T-rich Low_complexity Low_complexity 1 49 0 1 674 270 182 0 0 chr2R 11785480 11785546 -9361162 + (CATTC)n Simple_repeat Simple_repeat 2 67 0 1 674 21 82 0 0 chr2R 11786422 11786471 -9360237 + AT_rich Low_complexity Low_complexity 1 49 0 1 674 225 94 0 0 chr2R 11786836 11786868 -9359840 + (TCCG)n Simple_repeat Simple_repeat 3 34 0 1 674 32 43 0 0 chr2R 11788190 11788236 -9358472 + AT_rich Low_complexity Low_complexity 1 46 0 1 674 255 61 0 0 chr2R 11789102 11789135 -9357573 + (CGGTG)n Simple_repeat Simple_repeat 2 34 0 1 674 180 152 0 0 chr2R 11789286 11789319 -9357389 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1 674 183 184 0 0 chr2R 11789373 11789411 -9357297 + (TTTCG)n Simple_repeat Simple_repeat 4 41 0 1 674 27 73 0 0 chr2R 11789998 11790053 -9356655 + AT_rich Low_complexity Low_complexity 1 55 0 1 674 252 86 0 0 chr2R 11791014 11791049 -9355659 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 674 183 80 0 0 chr2R 11792897 11792922 -9353786 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 674 189 147 0 0 chr2R 11793644 11793678 -9353030 + (A)n Simple_repeat Simple_repeat 1 34 0 1 674 248 185 0 0 chr2R 11795785 11795839 -9350869 + DOC3_DM LINE Jockey 514 567 -4173 1 675 208 174 0 21 chr2R 11798100 11798147 -9348561 + (TGG)n Simple_repeat Simple_repeat 2 47 0 1 675 285 118 0 0 chr2R 11799580 11799631 -9347077 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 675 225 0 0 0 chr2R 11801307 11801332 -9345376 + (CCA)n Simple_repeat Simple_repeat 1 25 0 1 675 235 260 0 0 chr2R 11804500 11804550 -9342158 + (TCCG)n Simple_repeat Simple_repeat 1 50 0 1 675 267 150 0 0 chr2R 11808095 11808155 -9338553 + (GTATG)n Simple_repeat Simple_repeat 1 60 0 1 675 180 200 0 0 chr2R 11808924 11808969 -9337739 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 675 22 35 0 0 chr2R 11809838 11809867 -9336841 + AT_rich Low_complexity Low_complexity 1 29 0 1 675 24 67 0 0 chr2R 11815458 11815503 -9331205 + AT_rich Low_complexity Low_complexity 1 45 0 1 675 183 80 0 0 chr2R 11817190 11817215 -9329493 + (GTGTG)n Simple_repeat Simple_repeat 3 27 0 1 675 200 283 0 0 chr2R 11817300 11817353 -9329355 + (CATA)n Simple_repeat Simple_repeat 4 56 0 1 675 222 191 0 0 chr2R 11817685 11817732 -9328976 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 675 23 33 0 0 chr2R 11819621 11819651 -9327057 + AT_rich Low_complexity Low_complexity 1 30 0 1 675 21 36 0 0 chr2R 11827658 11827686 -9319022 + AT_rich Low_complexity Low_complexity 1 28 0 1 675 24 0 0 0 chr2R 11827963 11827987 -9318721 + AT_rich Low_complexity Low_complexity 1 24 0 1 675 32 43 0 0 chr2R 11830720 11830766 -9315942 + AT_rich Low_complexity Low_complexity 1 46 0 1 675 204 122 0 0 chr2R 11836228 11836269 -9310439 + (CAG)n Simple_repeat Simple_repeat 2 42 0 1 675 21 82 0 0 chr2R 11839227 11839276 -9307432 + AT_rich Low_complexity Low_complexity 1 49 0 1 675 230 178 22 0 chr2R 11840132 11840177 -9306531 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1 675 189 0 0 0 chr2R 11844587 11844608 -9302100 + (CCTG)n Simple_repeat Simple_repeat 4 24 0 1 675 22 56 0 0 chr2R 11846980 11847016 -9299692 + AT_rich Low_complexity Low_complexity 1 36 0 1 675 225 305 0 0 chr2R 11854736 11854831 -9291877 + CT-rich Low_complexity Low_complexity 2 96 0 1 675 200 34 0 33 chr2R 11856437 11856467 -9290241 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 675 26 0 0 0 chr2R 11875025 11875051 -9271657 + AT_rich Low_complexity Low_complexity 1 26 0 1 675 21 0 0 0 chr2R 11875706 11875727 -9270981 + AT_rich Low_complexity Low_complexity 1 21 0 1 675 37 0 0 0 chr2R 11876572 11876609 -9270099 + AT_rich Low_complexity Low_complexity 1 37 0 1 675 32 26 0 0 chr2R 11878199 11878238 -9268470 + AT_rich Low_complexity Low_complexity 1 39 0 1 675 203 189 0 0 chr2R 11881668 11881705 -9265003 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 675 351 78 0 0 chr2R 11888519 11888570 -9258138 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 675 57 16 0 0 chr2R 11888967 11889031 -9257677 + AT_rich Low_complexity Low_complexity 1 64 0 1 675 21 36 0 0 chr2R 11898861 11898889 -9247819 + AT_rich Low_complexity Low_complexity 1 28 0 1 675 182 132 0 50 chr2R 11909225 11909265 -9237443 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 1 675 29 0 0 0 chr2R 11912092 11912121 -9234587 + AT_rich Low_complexity Low_complexity 1 29 0 1 675 26 50 0 0 chr2R 11915610 11915650 -9231058 + AT_rich Low_complexity Low_complexity 1 40 0 1 675 258 81 0 0 chr2R 11919953 11919990 -9226718 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 675 208 283 0 0 chr2R 11920073 11920133 -9226575 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 675 232 256 0 49 chr2R 11921967 11922049 -9224659 + T-rich Low_complexity Low_complexity 3 80 0 1 675 201 74 0 0 chr2R 11923357 11923384 -9223324 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 675 21 57 0 0 chr2R 11923455 11923490 -9223218 + AT_rich Low_complexity Low_complexity 1 35 0 1 675 264 122 0 0 chr2R 11924348 11924389 -9222319 + (CAGAA)n Simple_repeat Simple_repeat 3 43 0 1 675 189 107 0 0 chr2R 11924553 11924581 -9222127 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 675 183 42 0 0 chr2R 11927294 11927318 -9219390 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 675 241 143 41 0 chr2R 11927384 11927433 -9219275 + (AACTG)n Simple_repeat Simple_repeat 4 54 0 1 676 224 100 0 24 chr2R 11927776 11927817 -9218891 + (TTGGGG)n Simple_repeat Simple_repeat 2 41 0 1 676 222 208 0 0 chr2R 11931427 11931480 -9215228 + (CCA)n Simple_repeat Simple_repeat 3 55 0 1 676 211 196 0 0 chr2R 11931567 11931613 -9215095 + (CAG)n Simple_repeat Simple_repeat 3 48 0 1 676 214 250 31 0 chr2R 11933327 11933391 -9213317 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 676 205 143 20 20 chr2R 11933706 11933756 -9212952 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 676 233 75 0 24 chr2R 11934249 11934290 -9212418 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 1 676 288 137 0 0 chr2R 11940503 11940554 -9206154 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 676 267 93 0 0 chr2R 11941015 11941058 -9205650 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 676 408 20 0 0 chr2R 11942488 11942537 -9204171 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 676 225 0 0 0 chr2R 11942732 11942757 -9203951 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 676 183 100 0 0 chr2R 11944516 11944546 -9202162 + (CAG)n Simple_repeat Simple_repeat 2 31 0 1 676 243 0 0 0 chr2R 11946411 11946438 -9200270 + (CAG)n Simple_repeat Simple_repeat 1 27 0 1 676 237 257 46 0 chr2R 11946727 11946836 -9199872 + ROO_I LTR Pao 644 757 -7499 1 676 200 261 0 0 chr2R 11946867 11946913 -9199795 + (CCCGAA)n Simple_repeat Simple_repeat 5 50 0 1 676 274 153 42 0 chr2R 11947073 11947145 -9199563 + (TGGA)n Simple_repeat Simple_repeat 1 75 0 1 676 213 94 0 0 chr2R 11947262 11947294 -9199414 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 676 186 43 0 0 chr2R 11947357 11947380 -9199328 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 676 2505 0 0 4 chr2R 11949287 11949563 -9197145 - BURDOCK_LTR LTR Gypsy 0 275 1 1 676 11059 1 1 2 chr2R 11949564 11950776 -9195932 - BURDOCK_I LTR Gypsy 0 5860 4651 1 676 7311 5 0 0 chr2R 11950775 11951587 -9195121 - BURDOCK_I LTR Gypsy -5048 812 1 1 676 2505 0 0 4 chr2R 11951587 11951863 -9194845 - BURDOCK_LTR LTR Gypsy 0 275 1 1 676 239 129 44 66 chr2R 11953957 11954048 -9192660 - ROO_I LTR Pao -7527 729 641 1 676 306 50 0 0 chr2R 11955670 11955710 -9190998 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 676 183 186 0 0 chr2R 11956161 11956204 -9190504 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 676 189 121 0 0 chr2R 11957038 11957071 -9189637 + (GCTG)n Simple_repeat Simple_repeat 3 35 0 1 676 225 139 0 0 chr2R 11957344 11957387 -9189321 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 676 218 345 0 0 chr2R 11958316 11958400 -9188308 + (CTG)n Simple_repeat Simple_repeat 1 84 0 1 676 213 65 0 0 chr2R 11959396 11959427 -9187281 + (A)n Simple_repeat Simple_repeat 1 31 0 1 676 186 43 0 0 chr2R 11960872 11960895 -9185813 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 676 225 0 0 0 chr2R 11968315 11968340 -9178368 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 676 222 118 0 0 chr2R 11968746 11968780 -9177928 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 676 21 57 0 0 chr2R 11968944 11968979 -9177729 + AT_rich Low_complexity Low_complexity 1 35 0 1 676 267 103 0 0 chr2R 11969211 11969250 -9177458 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1 676 208 169 70 0 chr2R 11969746 11969817 -9176891 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 676 24 0 0 0 chr2R 11971396 11971420 -9175288 + AT_rich Low_complexity Low_complexity 1 24 0 1 676 318 87 0 0 chr2R 11973634 11973680 -9173028 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 676 438 139 0 0 chr2R 11974453 11974539 -9172169 + (TTG)n Simple_repeat Simple_repeat 1 86 0 1 676 180 77 0 0 chr2R 11974537 11974563 -9172145 + (ATG)n Simple_repeat Simple_repeat 1 26 0 1 676 225 108 0 0 chr2R 11978627 11978664 -9168044 + (GGA)n Simple_repeat Simple_repeat 1 37 0 1 676 23 54 0 0 chr2R 11981006 11981043 -9165665 + AT_rich Low_complexity Low_complexity 1 37 0 1 676 272 27 27 0 chr2R 11982430 11982467 -9164241 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1 676 256 210 16 0 chr2R 11984098 11984160 -9162548 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 676 21 0 0 0 chr2R 11984381 11984402 -9162306 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 215 200 0 0 chr2R 11985756 11985796 -9160912 + (CACG)n Simple_repeat Simple_repeat 1 40 0 1 676 207 69 0 0 chr2R 11990532 11990561 -9156147 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 676 333 47 0 0 chr2R 11991499 11991542 -9155166 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 676 192 111 18 36 chr2R 11993587 11993643 -9153065 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 676 216 203 17 0 chr2R 11993648 11993707 -9153001 + (CAA)n Simple_repeat Simple_repeat 3 62 0 1 676 189 0 0 0 chr2R 11994305 11994326 -9152382 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1 676 22 35 0 0 chr2R 11994896 11994925 -9151783 + AT_rich Low_complexity Low_complexity 1 29 0 1 676 27 49 0 0 chr2R 11997556 11997597 -9149111 + AT_rich Low_complexity Low_complexity 1 41 0 1 676 30 59 0 0 chr2R 11997783 11997834 -9148874 + AT_rich Low_complexity Low_complexity 1 51 0 1 676 22 56 0 0 chr2R 11999651 11999687 -9147021 + AT_rich Low_complexity Low_complexity 1 36 0 1 676 222 337 0 0 chr2R 11999717 11999815 -9146893 + GA-rich Low_complexity Low_complexity 2 99 0 1 676 201 94 0 0 chr2R 11999840 11999872 -9146836 + (GGA)n Simple_repeat Simple_repeat 2 33 0 1 676 23 33 0 0 chr2R 12012314 12012344 -9134364 + AT_rich Low_complexity Low_complexity 1 30 0 1 676 209 205 0 0 chr2R 12017853 12017892 -9128816 + CT-rich Low_complexity Low_complexity 1 39 0 1 676 219 105 35 17 chr2R 12021345 12021403 -9125305 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 676 21 0 0 0 chr2R 12022557 12022578 -9124130 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 22 0 0 0 chr2R 12030554 12030576 -9116132 + AT_rich Low_complexity Low_complexity 1 22 0 1 676 198 167 0 0 chr2R 12038092 12038128 -9108580 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 676 22 35 0 0 chr2R 12038676 12038705 -9108003 + AT_rich Low_complexity Low_complexity 1 29 0 1 676 1259 80 215 0 chr2R 12039736 12040045 -9106663 - DNAREP1_DM LINE Penelope -1 593 218 1 676 493 18 0 0 chr2R 12040045 12040100 -9106608 - DNAREP1_DM LINE Penelope -539 55 1 1 676 198 71 0 0 chr2R 12040358 12040386 -9106322 + (GGA)n Simple_repeat Simple_repeat 1 28 0 1 676 198 0 0 0 chr2R 12041564 12041586 -9105122 + (TCG)n Simple_repeat Simple_repeat 2 23 0 1 676 217 241 0 0 chr2R 12041610 12041668 -9105040 + A-rich Low_complexity Low_complexity 1 58 0 1 676 21 0 0 0 chr2R 12042095 12042116 -9104592 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 210 171 0 0 chr2R 12043172 12043213 -9103495 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 676 204 40 0 0 chr2R 12043284 12043309 -9103399 + (TTG)n Simple_repeat Simple_repeat 1 25 0 1 676 26 50 0 0 chr2R 12044855 12044895 -9101813 + AT_rich Low_complexity Low_complexity 1 40 0 1 676 28 48 0 0 chr2R 12046977 12047019 -9099689 + AT_rich Low_complexity Low_complexity 1 42 0 1 676 240 167 0 0 chr2R 12047510 12047558 -9099150 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 676 48 18 0 0 chr2R 12048126 12048181 -9098527 + AT_rich Low_complexity Low_complexity 1 55 0 1 676 25 0 0 0 chr2R 12048723 12048748 -9097960 + AT_rich Low_complexity Low_complexity 1 25 0 1 676 240 59 0 0 chr2R 12049486 12049520 -9097188 + (A)n Simple_repeat Simple_repeat 1 34 0 1 676 195 139 0 0 chr2R 12050478 12050514 -9096194 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 676 23 0 0 0 chr2R 12051387 12051410 -9095298 + AT_rich Low_complexity Low_complexity 1 23 0 1 676 294 95 0 0 chr2R 12051877 12051919 -9094789 + (CAA)n Simple_repeat Simple_repeat 1 42 0 1 677 207 209 0 0 chr2R 12066973 12067016 -9079692 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 677 23 33 0 0 chr2R 12072122 12072152 -9074556 + AT_rich Low_complexity Low_complexity 1 30 0 1 677 21 0 0 0 chr2R 12073738 12073759 -9072949 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 218 182 0 0 chr2R 12074672 12074716 -9071992 + (CCCA)n Simple_repeat Simple_repeat 3 46 0 1 677 221 253 13 13 chr2R 12075268 12075344 -9071364 + CT-rich Low_complexity Low_complexity 1 76 0 1 677 23 0 0 0 chr2R 12077221 12077244 -9069464 + AT_rich Low_complexity Low_complexity 1 23 0 1 677 224 214 0 0 chr2R 12078225 12078267 -9068441 + GA-rich Low_complexity Low_complexity 2 43 0 1 677 288 176 474 32 chr2R 12081105 12081257 -9065451 - DNAREP1_DM LINE Penelope 0 594 376 1 677 413 254 17 8 chr2R 12081347 12081466 -9065242 - DNAREP1_DM LINE Penelope -474 120 1 1 677 21 0 0 0 chr2R 12083738 12083759 -9062949 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 264 59 0 0 chr2R 12085140 12085174 -9061534 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1 677 30 59 0 0 chr2R 12090690 12090741 -9055967 + AT_rich Low_complexity Low_complexity 1 51 0 1 677 21 0 0 0 chr2R 12091050 12091071 -9055637 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 23 0 0 0 chr2R 12091758 12091781 -9054927 + AT_rich Low_complexity Low_complexity 1 23 0 1 677 201 133 0 0 chr2R 12093005 12093035 -9053673 + (CTG)n Simple_repeat Simple_repeat 2 31 0 1 677 183 80 0 0 chr2R 12094541 12094566 -9052142 + (CCGAA)n Simple_repeat Simple_repeat 2 26 0 1 677 189 107 0 0 chr2R 12095532 12095560 -9051148 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 677 291 114 0 0 chr2R 12095816 12095860 -9050848 + (GCTG)n Simple_repeat Simple_repeat 3 46 0 1 677 217 51 0 49 chr2R 12097438 12097479 -9049229 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 1 677 21 0 0 0 chr2R 12098415 12098436 -9048272 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 21 0 0 0 chr2R 12101475 12101496 -9045212 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 21 36 0 0 chr2R 12107046 12107074 -9039634 + AT_rich Low_complexity Low_complexity 1 28 0 1 677 403 40 0 0 chr2R 12107302 12107352 -9039356 + BARI1 DNA Tc1 39 88 -1662 1 677 460 67 0 0 chr2R 12107369 12107429 -9039279 - BARI1 DNA Tc1 -1655 95 36 1 677 22 0 0 0 chr2R 12109613 12109635 -9037073 + AT_rich Low_complexity Low_complexity 1 22 0 1 677 198 103 0 0 chr2R 12122576 12122605 -9024103 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 677 21 0 0 0 chr2R 12128453 12128474 -9018234 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 28 99 0 0 chr2R 12130091 12130182 -9016526 + AT_rich Low_complexity Low_complexity 1 91 0 1 677 255 79 0 0 chr2R 12135025 12135063 -9011645 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 677 34 55 0 0 chr2R 12135434 12135489 -9011219 + AT_rich Low_complexity Low_complexity 1 55 0 1 677 23 0 0 0 chr2R 12135993 12136016 -9010692 + AT_rich Low_complexity Low_complexity 1 23 0 1 677 26 30 0 0 chr2R 12138092 12138125 -9008583 + AT_rich Low_complexity Low_complexity 1 33 0 1 677 28 0 0 0 chr2R 12139579 12139607 -9007101 + AT_rich Low_complexity Low_complexity 1 28 0 1 677 21 36 0 0 chr2R 12141051 12141079 -9005629 + AT_rich Low_complexity Low_complexity 1 28 0 1 677 24 32 0 0 chr2R 12141772 12141803 -9004905 + AT_rich Low_complexity Low_complexity 1 31 0 1 677 195 170 0 0 chr2R 12142062 12142109 -9004599 + (TCG)n Simple_repeat Simple_repeat 2 48 0 1 677 243 61 0 0 chr2R 12143193 12143226 -9003482 + (GGA)n Simple_repeat Simple_repeat 2 34 0 1 677 231 36 0 0 chr2R 12145993 12146021 -9000687 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 677 22 56 0 0 chr2R 12154600 12154636 -8992072 + AT_rich Low_complexity Low_complexity 1 36 0 1 677 208 222 0 0 chr2R 12158010 12158064 -8988644 + GA-rich Low_complexity Low_complexity 2 55 0 1 677 203 176 0 0 chr2R 12166208 12166242 -8980466 + CT-rich Low_complexity Low_complexity 1 34 0 1 677 424 103 0 0 chr2R 12170519 12170577 -8976131 - DNAREP1_DM LINE Penelope -536 58 1 1 677 21 0 0 0 chr2R 12173741 12173762 -8972946 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 334 191 29 0 chr2R 12174998 12175066 -8971642 - DNAREP1_DM LINE Penelope -509 85 16 1 677 21 57 0 0 chr2R 12175761 12175796 -8970912 + AT_rich Low_complexity Low_complexity 1 35 0 1 677 21 0 0 0 chr2R 12177205 12177226 -8969482 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 26 30 0 0 chr2R 12181746 12181779 -8964929 + AT_rich Low_complexity Low_complexity 1 33 0 1 677 185 65 0 31 chr2R 12184677 12184709 -8961999 + (CTAAA)n Simple_repeat Simple_repeat 1 31 0 1 677 1521 34 0 0 chr2R 12185720 12186046 -8960662 + (TAGA)n Simple_repeat Simple_repeat 1 326 0 1 678 234 105 0 0 chr2R 12190227 12190265 -8956443 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 678 228 67 0 0 chr2R 12190507 12190537 -8956171 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 1 678 200 135 27 0 chr2R 12192675 12192712 -8953996 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 678 366 123 0 0 chr2R 12194630 12194687 -8952021 + (TCTCTG)n Simple_repeat Simple_repeat 6 62 0 1 678 198 143 0 0 chr2R 12214974 12215009 -8931699 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 678 189 74 0 0 chr2R 12216834 12216861 -8929847 + (T)n Simple_repeat Simple_repeat 1 27 0 1 678 201 121 0 0 chr2R 12217761 12217794 -8928914 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1 678 210 179 0 0 chr2R 12218737 12218793 -8927915 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 678 200 186 0 17 chr2R 12218928 12218988 -8927720 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 678 22 35 0 0 chr2R 12219163 12219192 -8927516 + AT_rich Low_complexity Low_complexity 1 29 0 1 678 22 35 0 0 chr2R 12219456 12219485 -8927223 + AT_rich Low_complexity Low_complexity 1 29 0 1 678 333 140 0 0 chr2R 12220448 12220505 -8926203 + (CTAAA)n Simple_repeat Simple_repeat 3 59 0 1 678 231 103 0 0 chr2R 12224692 12224731 -8921977 + (TCC)n Simple_repeat Simple_repeat 3 41 0 1 678 22 35 0 0 chr2R 12225314 12225343 -8921365 + AT_rich Low_complexity Low_complexity 1 29 0 1 678 231 36 0 0 chr2R 12226512 12226540 -8920168 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 678 51 31 0 0 chr2R 12235092 12235157 -8911551 + AT_rich Low_complexity Low_complexity 1 65 0 1 678 29 0 0 0 chr2R 12236480 12236509 -8910199 + AT_rich Low_complexity Low_complexity 1 29 0 1 678 210 229 21 0 chr2R 12236856 12236904 -8909804 + (CCCA)n Simple_repeat Simple_repeat 1 49 0 1 678 189 0 0 0 chr2R 12239107 12239128 -8907580 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 678 252 59 0 0 chr2R 12239945 12239979 -8906729 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 678 240 167 0 0 chr2R 12243205 12243253 -8903455 + (CTG)n Simple_repeat Simple_repeat 3 50 0 1 678 182 208 19 0 chr2R 12243518 12243571 -8903137 + (CTG)n Simple_repeat Simple_repeat 3 56 0 1 678 301 165 0 32 chr2R 12249941 12250035 -8896673 + (CAG)n Simple_repeat Simple_repeat 1 91 0 1 678 24 53 0 0 chr2R 12251004 12251042 -8895666 + AT_rich Low_complexity Low_complexity 1 38 0 1 678 222 128 0 0 chr2R 12252308 12252347 -8894361 + (CATGC)n Simple_repeat Simple_repeat 5 43 0 1 678 315 49 0 0 chr2R 12253633 12253674 -8893034 + (AAATG)n Simple_repeat Simple_repeat 5 45 0 1 678 273 57 0 0 chr2R 12254077 12254112 -8892596 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 678 210 105 0 0 chr2R 12255148 12255186 -8891522 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 678 189 107 0 0 chr2R 12260437 12260465 -8886243 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 1 678 22 56 0 0 chr2R 12260936 12260972 -8885736 + AT_rich Low_complexity Low_complexity 1 36 0 1 678 209 189 0 36 chr2R 12261325 12261380 -8885328 + T-rich Low_complexity Low_complexity 3 55 0 1 678 27 0 0 0 chr2R 12261664 12261691 -8885017 + AT_rich Low_complexity Low_complexity 1 27 0 1 678 24 32 0 0 chr2R 12262090 12262121 -8884587 + AT_rich Low_complexity Low_complexity 1 31 0 1 678 237 65 0 0 chr2R 12264592 12264623 -8882085 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 678 195 42 0 0 chr2R 12265661 12265685 -8881023 + (T)n Simple_repeat Simple_repeat 1 24 0 1 678 21 36 0 0 chr2R 12267126 12267154 -8879554 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 24 0 0 0 chr2R 12267703 12267727 -8878981 + AT_rich Low_complexity Low_complexity 1 24 0 1 678 41 0 0 0 chr2R 12267846 12267887 -8878821 + AT_rich Low_complexity Low_complexity 1 41 0 1 678 210 71 0 0 chr2R 12269074 12269102 -8877606 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 678 28 79 0 0 chr2R 12269403 12269466 -8877242 + AT_rich Low_complexity Low_complexity 1 63 0 1 678 27 29 0 0 chr2R 12269496 12269530 -8877178 + AT_rich Low_complexity Low_complexity 1 34 0 1 678 28 48 0 0 chr2R 12270595 12270637 -8876071 + AT_rich Low_complexity Low_complexity 1 42 0 1 678 479 173 135 0 chr2R 12270707 12270811 -8875897 - DNAREP1_DM LINE Penelope -31 563 446 1 678 25 51 0 0 chr2R 12273596 12273635 -8873073 + AT_rich Low_complexity Low_complexity 1 39 0 1 678 28 0 0 0 chr2R 12275142 12275170 -8871538 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 180 0 0 0 chr2R 12276360 12276380 -8870328 + (CAG)n Simple_repeat Simple_repeat 1 20 0 1 678 219 152 0 0 chr2R 12277450 12277496 -8869212 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 678 215 290 0 0 chr2R 12277571 12277640 -8869068 + (TTG)n Simple_repeat Simple_repeat 1 69 0 1 678 291 122 0 0 chr2R 12278424 12278473 -8868235 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 678 209 194 0 0 chr2R 12278640 12278676 -8868032 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 678 198 118 0 0 chr2R 12279044 12279078 -8867630 + (CACTC)n Simple_repeat Simple_repeat 3 36 0 1 678 183 80 0 0 chr2R 12281295 12281320 -8865388 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 678 180 0 0 0 chr2R 12282615 12282635 -8864073 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 678 216 0 0 0 chr2R 12282738 12282762 -8863946 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 678 237 65 0 0 chr2R 12283404 12283435 -8863273 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 1 678 21 0 0 0 chr2R 12288714 12288735 -8857973 + AT_rich Low_complexity Low_complexity 1 21 0 1 678 264 137 0 0 chr2R 12289961 12290012 -8856696 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 678 291 250 0 0 chr2R 12290541 12290613 -8856095 + (CTG)n Simple_repeat Simple_repeat 3 74 0 1 678 237 33 0 0 chr2R 12292353 12292383 -8854325 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 678 280 254 0 0 chr2R 12293948 12294015 -8852693 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 678 24 67 0 0 chr2R 12294237 12294282 -8852426 + AT_rich Low_complexity Low_complexity 1 45 0 1 678 195 100 0 0 chr2R 12298958 12298988 -8847720 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 678 238 196 0 0 chr2R 12300109 12300155 -8846553 + (AAGTG)n Simple_repeat Simple_repeat 3 48 0 1 678 204 158 0 0 chr2R 12300527 12300565 -8846143 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 678 219 114 0 0 chr2R 12307411 12307446 -8839262 + (T)n Simple_repeat Simple_repeat 1 35 0 1 678 192 125 0 0 chr2R 12309947 12309979 -8836729 + (A)n Simple_repeat Simple_repeat 1 32 0 1 678 258 105 0 0 chr2R 12311322 12311360 -8835348 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 678 204 67 0 0 chr2R 12312183 12312213 -8834495 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 678 25 51 0 0 chr2R 12313611 12313650 -8833058 + AT_rich Low_complexity Low_complexity 1 39 0 1 678 213 167 0 40 chr2R 12315208 12315258 -8831450 + (TCTCTG)n Simple_repeat Simple_repeat 1 48 0 1 678 27 73 0 0 chr2R 12316557 12316612 -8830096 + AT_rich Low_complexity Low_complexity 1 55 0 1 678 212 301 0 0 chr2R 12318805 12318888 -8827820 + A-rich Low_complexity Low_complexity 1 83 0 1 678 21 36 0 0 chr2R 12319581 12319609 -8827099 + AT_rich Low_complexity Low_complexity 1 28 0 1 679 27 0 0 0 chr2R 12325858 12325885 -8820823 + AT_rich Low_complexity Low_complexity 1 27 0 1 679 219 88 0 0 chr2R 12326602 12326636 -8820072 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 679 219 36 0 0 chr2R 12326843 12326871 -8819837 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 1 679 270 0 0 0 chr2R 12327510 12327540 -8819168 + (GGATG)n Simple_repeat Simple_repeat 4 33 0 1 679 309 174 0 0 chr2R 12330078 12330147 -8816561 + (ACTG)n Simple_repeat Simple_repeat 3 71 0 1 679 26 30 0 0 chr2R 12330498 12330531 -8816177 + AT_rich Low_complexity Low_complexity 1 33 0 1 679 200 97 32 0 chr2R 12335577 12335608 -8811100 + (TTTTC)n Simple_repeat Simple_repeat 5 36 0 1 679 22 0 0 0 chr2R 12336327 12336349 -8810359 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 288 0 0 0 chr2R 12336671 12336703 -8810005 + (ATG)n Simple_repeat Simple_repeat 1 32 0 1 679 183 129 0 0 chr2R 12337030 12337061 -8809647 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 1 679 201 175 25 0 chr2R 12337620 12337660 -8809048 + (ATTCG)n Simple_repeat Simple_repeat 4 44 0 1 679 210 91 0 0 chr2R 12337755 12337788 -8808920 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 679 315 85 0 0 chr2R 12339757 12339804 -8806904 + (CAGTT)n Simple_repeat Simple_repeat 5 51 0 1 679 210 91 0 0 chr2R 12340133 12340166 -8806542 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 679 21 36 0 0 chr2R 12341118 12341146 -8805562 + AT_rich Low_complexity Low_complexity 1 28 0 1 679 24 32 0 0 chr2R 12342555 12342586 -8804122 + AT_rich Low_complexity Low_complexity 1 31 0 1 679 30 0 0 0 chr2R 12342703 12342733 -8803975 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 482 73 15 0 chr2R 12343579 12343647 -8803061 - DNAREP1_DM LINE Penelope 0 594 526 1 679 343 200 0 0 chr2R 12343826 12343886 -8802822 - DNAREP1_DM LINE Penelope -534 60 1 1 679 21 0 0 0 chr2R 12344289 12344310 -8802398 + AT_rich Low_complexity Low_complexity 1 21 0 1 679 282 116 0 0 chr2R 12344443 12344486 -8802222 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 679 206 136 0 22 chr2R 12348303 12348348 -8798360 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 679 216 143 0 0 chr2R 12348615 12348657 -8798051 + (CAG)n Simple_repeat Simple_repeat 3 44 0 1 679 348 164 0 0 chr2R 12350097 12350164 -8796544 + (AGTTG)n Simple_repeat Simple_repeat 2 68 0 1 679 33 25 0 0 chr2R 12350846 12350886 -8795822 + AT_rich Low_complexity Low_complexity 1 40 0 1 679 22 35 0 0 chr2R 12353955 12353984 -8792724 + AT_rich Low_complexity Low_complexity 1 29 0 1 679 21 0 0 0 chr2R 12355053 12355074 -8791634 + AT_rich Low_complexity Low_complexity 1 21 0 1 679 24 0 0 0 chr2R 12355615 12355639 -8791069 + AT_rich Low_complexity Low_complexity 1 24 0 1 679 249 139 0 0 chr2R 12357814 12357857 -8788851 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 679 224 200 14 0 chr2R 12360210 12360280 -8786428 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 679 183 80 0 0 chr2R 12360667 12360692 -8786016 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 1 679 195 129 0 0 chr2R 12361680 12361711 -8784997 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 679 25 65 0 0 chr2R 12362031 12362077 -8784631 + AT_rich Low_complexity Low_complexity 1 46 0 1 679 25 31 0 0 chr2R 12363778 12363810 -8782898 + AT_rich Low_complexity Low_complexity 1 32 0 1 679 303 93 0 0 chr2R 12365259 12365302 -8781406 + (CAG)n Simple_repeat Simple_repeat 3 45 0 1 679 192 77 0 0 chr2R 12365887 12365913 -8780795 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 679 207 0 0 0 chr2R 12368763 12368786 -8777922 + (CGGA)n Simple_repeat Simple_repeat 3 25 0 1 679 255 114 0 0 chr2R 12371121 12371165 -8775543 + (CAG)n Simple_repeat Simple_repeat 3 46 0 1 679 231 229 0 35 chr2R 12371264 12371350 -8775358 + (CAG)n Simple_repeat Simple_repeat 2 84 0 1 679 180 0 0 0 chr2R 12371452 12371472 -8775236 + (GCTTG)n Simple_repeat Simple_repeat 2 21 0 1 679 186 43 0 0 chr2R 12371486 12371509 -8775199 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 679 21 0 0 0 chr2R 12372267 12372288 -8774420 + AT_rich Low_complexity Low_complexity 1 21 0 1 679 22 35 0 0 chr2R 12373362 12373391 -8773317 + AT_rich Low_complexity Low_complexity 1 29 0 1 679 23 33 0 0 chr2R 12375283 12375313 -8771395 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 26 0 0 0 chr2R 12375787 12375813 -8770895 + AT_rich Low_complexity Low_complexity 1 26 0 1 679 24 0 0 0 chr2R 12378530 12378554 -8768154 + AT_rich Low_complexity Low_complexity 1 24 0 1 679 21 36 0 0 chr2R 12382178 12382206 -8764502 + AT_rich Low_complexity Low_complexity 1 28 0 1 679 231 103 0 0 chr2R 12383796 12383835 -8762873 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 679 22 0 0 0 chr2R 12386525 12386547 -8760161 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 231 88 0 0 chr2R 12387413 12387447 -8759261 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 679 21 71 0 0 chr2R 12388314 12388356 -8758352 + AT_rich Low_complexity Low_complexity 1 42 0 1 679 204 40 0 0 chr2R 12388904 12388929 -8757779 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 679 210 178 22 0 chr2R 12389389 12389434 -8757274 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 679 336 83 0 0 chr2R 12393515 12393563 -8753145 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 679 180 0 0 0 chr2R 12395088 12395108 -8751600 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 679 264 30 0 0 chr2R 12400045 12400078 -8746630 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 1 679 21 82 0 0 chr2R 12400426 12400475 -8746233 + AT_rich Low_complexity Low_complexity 1 49 0 1 679 201 74 0 0 chr2R 12400975 12401002 -8745706 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 679 192 135 0 0 chr2R 12401725 12401762 -8744946 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 679 22 0 0 0 chr2R 12403380 12403402 -8743306 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 28 0 0 0 chr2R 12403510 12403538 -8743170 + AT_rich Low_complexity Low_complexity 1 28 0 1 679 242 216 0 0 chr2R 12403915 12403966 -8742742 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 679 186 43 0 0 chr2R 12405969 12405992 -8740716 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 679 228 111 0 0 chr2R 12407711 12407747 -8738961 + (CAGTG)n Simple_repeat Simple_repeat 5 40 0 1 679 26 0 0 0 chr2R 12410068 12410094 -8736614 + AT_rich Low_complexity Low_complexity 1 26 0 1 679 206 277 0 0 chr2R 12410521 12410568 -8736140 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 679 26 0 0 0 chr2R 12411186 12411212 -8735496 + AT_rich Low_complexity Low_complexity 1 26 0 1 679 210 136 0 0 chr2R 12414159 12414203 -8732505 + (CATAC)n Simple_repeat Simple_repeat 5 48 0 1 679 189 121 0 0 chr2R 12415630 12415663 -8731045 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1 679 237 139 0 0 chr2R 12417454 12417497 -8729211 + (CAGTT)n Simple_repeat Simple_repeat 4 46 0 1 679 23 33 0 0 chr2R 12420933 12420963 -8725745 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 218 56 28 0 chr2R 12421532 12421568 -8725140 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 679 237 33 0 0 chr2R 12425148 12425178 -8721530 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 679 198 71 0 0 chr2R 12425269 12425297 -8721411 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 679 22 0 0 0 chr2R 12425596 12425618 -8721090 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 23 33 0 0 chr2R 12427144 12427174 -8719534 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 2297 0 0 0 chr2R 12427197 12427473 -8719235 + Copia_LTR LTR Copia 1 276 0 1 679 39207 0 0 1 chr2R 12427473 12432072 -8714636 + Copia_I LTR Copia 1 4593 0 1 679 2297 0 0 0 chr2R 12432072 12432348 -8714360 + Copia_LTR LTR Copia 1 276 0 1 679 30 59 0 0 chr2R 12435577 12435628 -8711080 + AT_rich Low_complexity Low_complexity 1 51 0 1 679 24 0 0 0 chr2R 12436380 12436404 -8710304 + AT_rich Low_complexity Low_complexity 1 24 0 1 679 234 0 0 0 chr2R 12436615 12436641 -8710067 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 679 29 0 0 0 chr2R 12439368 12439397 -8707311 + AT_rich Low_complexity Low_complexity 1 29 0 1 679 189 195 0 0 chr2R 12440045 12440086 -8706622 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 1 679 29 0 0 0 chr2R 12440833 12440862 -8705846 + AT_rich Low_complexity Low_complexity 1 29 0 1 679 34 42 0 0 chr2R 12440928 12440976 -8705732 + AT_rich Low_complexity Low_complexity 1 48 0 1 679 22 0 0 0 chr2R 12441714 12441736 -8704972 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 33 43 0 0 chr2R 12442215 12442262 -8704446 + AT_rich Low_complexity Low_complexity 1 47 0 1 679 29 47 0 0 chr2R 12444949 12444992 -8701716 + AT_rich Low_complexity Low_complexity 1 43 0 1 679 180 0 0 0 chr2R 12445747 12445767 -8700941 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 680 180 0 0 0 chr2R 12452843 12452863 -8693845 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 680 37 39 0 0 chr2R 12453202 12453253 -8693455 + AT_rich Low_complexity Low_complexity 1 51 0 1 680 23 54 0 0 chr2R 12455563 12455600 -8691108 + AT_rich Low_complexity Low_complexity 1 37 0 1 680 201 74 0 0 chr2R 12459907 12459934 -8686774 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 680 32 57 0 0 chr2R 12460346 12460399 -8686309 + AT_rich Low_complexity Low_complexity 1 53 0 1 680 35 24 0 0 chr2R 12461730 12461772 -8684936 + AT_rich Low_complexity Low_complexity 1 42 0 1 680 34 0 0 0 chr2R 12462210 12462244 -8684464 + AT_rich Low_complexity Low_complexity 1 34 0 1 680 201 108 0 0 chr2R 12464219 12464256 -8682452 + (A)n Simple_repeat Simple_repeat 1 37 0 1 680 246 136 0 0 chr2R 12464375 12464419 -8682289 + (CAAAT)n Simple_repeat Simple_repeat 4 47 0 1 680 43 71 0 0 chr2R 12466626 12466711 -8679997 + AT_rich Low_complexity Low_complexity 1 85 0 1 680 216 111 0 0 chr2R 12467240 12467276 -8679432 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 680 401 112 292 0 chr2R 12469208 12469297 -8677411 + Transib-N1_DM DNA Transib 2 116 -398 1 680 298 192 192 0 chr2R 12469375 12469448 -8677260 + Transib-N1_DM DNA Transib 428 514 0 1 680 210 191 0 0 chr2R 12469777 12469819 -8676889 + (TCCG)n Simple_repeat Simple_repeat 4 45 0 1 680 207 0 0 0 chr2R 12471056 12471079 -8675629 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 680 204 200 0 0 chr2R 12473940 12473980 -8672728 + (CCG)n Simple_repeat Simple_repeat 1 40 0 1 680 22 0 0 0 chr2R 12481472 12481494 -8665214 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 195 42 0 0 chr2R 12481866 12481890 -8664818 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 680 23 33 0 0 chr2R 12482440 12482470 -8664238 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 21 0 0 0 chr2R 12484895 12484916 -8661792 + AT_rich Low_complexity Low_complexity 1 21 0 1 680 203 152 0 0 chr2R 12485189 12485222 -8661486 + A-rich Low_complexity Low_complexity 4 36 0 1 680 21 36 0 0 chr2R 12489756 12489784 -8656924 + AT_rich Low_complexity Low_complexity 1 28 0 1 680 208 188 0 20 chr2R 12489909 12489958 -8656750 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 680 30 27 0 0 chr2R 12491493 12491530 -8655178 + AT_rich Low_complexity Low_complexity 1 37 0 1 680 26 0 0 0 chr2R 12493424 12493450 -8653258 + AT_rich Low_complexity Low_complexity 1 26 0 1 680 31 68 0 0 chr2R 12494302 12494361 -8652347 + AT_rich Low_complexity Low_complexity 1 59 0 1 680 22 0 0 0 chr2R 12497267 12497289 -8649419 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 23 33 0 0 chr2R 12498101 12498131 -8648577 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 24 32 0 0 chr2R 12498602 12498633 -8648075 + AT_rich Low_complexity Low_complexity 1 31 0 1 680 239 157 0 19 chr2R 12499434 12499486 -8647222 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 680 284 45 0 43 chr2R 12500331 12500378 -8646330 + (CTATT)n Simple_repeat Simple_repeat 3 47 0 1 680 24 32 0 0 chr2R 12501758 12501789 -8644919 + AT_rich Low_complexity Low_complexity 1 31 0 1 680 214 175 0 0 chr2R 12503697 12503737 -8642971 + (ATG)n Simple_repeat Simple_repeat 1 40 0 1 680 189 0 0 0 chr2R 12504057 12504078 -8642630 + (GGA)n Simple_repeat Simple_repeat 3 23 0 1 680 201 159 0 0 chr2R 12505446 12505490 -8641218 + (CAGCT)n Simple_repeat Simple_repeat 4 47 0 1 680 209 255 0 0 chr2R 12505925 12505976 -8640732 + (TGGA)n Simple_repeat Simple_repeat 3 53 0 1 680 23 33 0 0 chr2R 12507969 12507999 -8638709 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 23 0 0 0 chr2R 12508334 12508357 -8638351 + AT_rich Low_complexity Low_complexity 1 23 0 1 680 21 82 0 0 chr2R 12509539 12509588 -8637120 + AT_rich Low_complexity Low_complexity 1 49 0 1 680 32 0 0 0 chr2R 12511585 12511617 -8635091 + AT_rich Low_complexity Low_complexity 1 32 0 1 680 213 159 0 0 chr2R 12513562 12513606 -8633102 + T-rich Low_complexity Low_complexity 1 44 0 1 680 243 0 0 0 chr2R 12514086 12514113 -8632595 + (CAAT)n Simple_repeat Simple_repeat 1 27 0 1 680 27 29 0 0 chr2R 12515273 12515307 -8631401 + AT_rich Low_complexity Low_complexity 1 34 0 1 680 22 56 0 0 chr2R 12516437 12516473 -8630235 + AT_rich Low_complexity Low_complexity 1 36 0 1 680 180 77 0 0 chr2R 12524711 12524737 -8621971 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1 680 204 150 25 0 chr2R 12524974 12525014 -8621694 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 680 21 0 0 0 chr2R 12525890 12525911 -8620797 + GC_rich Low_complexity Low_complexity 1 21 0 1 680 21 0 0 0 chr2R 12526275 12526296 -8620412 + AT_rich Low_complexity Low_complexity 1 21 0 1 680 21 36 0 0 chr2R 12527048 12527076 -8619632 + AT_rich Low_complexity Low_complexity 1 28 0 1 680 205 156 0 0 chr2R 12527846 12527878 -8618830 + (CTG)n Simple_repeat Simple_repeat 2 33 0 1 680 233 98 0 24 chr2R 12529052 12529094 -8617614 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 680 224 111 22 0 chr2R 12531241 12531286 -8615422 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 680 198 225 0 43 chr2R 12533032 12533125 -8613583 + (TCCA)n Simple_repeat Simple_repeat 2 90 0 1 680 189 107 0 0 chr2R 12534183 12534211 -8612497 + (GGAGAA)n Simple_repeat Simple_repeat 1 28 0 1 680 23 0 0 0 chr2R 12548158 12548181 -8598527 + AT_rich Low_complexity Low_complexity 1 23 0 1 680 22 0 0 0 chr2R 12550717 12550739 -8595969 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 22 0 0 0 chr2R 12550773 12550795 -8595913 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 27 0 0 0 chr2R 12556697 12556724 -8589984 + AT_rich Low_complexity Low_complexity 1 27 0 1 680 27 87 0 0 chr2R 12556896 12556965 -8589743 + AT_rich Low_complexity Low_complexity 1 69 0 1 680 25 0 0 0 chr2R 12561959 12561984 -8584724 + AT_rich Low_complexity Low_complexity 1 25 0 1 680 189 0 0 0 chr2R 12562001 12562022 -8584686 + (CTG)n Simple_repeat Simple_repeat 3 23 0 1 680 215 271 0 23 chr2R 12562908 12562995 -8583713 + (TG)n Simple_repeat Simple_repeat 2 86 0 1 680 203 259 17 0 chr2R 12564894 12564952 -8581756 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 680 32 0 0 0 chr2R 12565452 12565484 -8581224 + AT_rich Low_complexity Low_complexity 1 32 0 1 680 198 91 0 0 chr2R 12568126 12568159 -8578549 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 680 24 0 0 0 chr2R 12568921 12568945 -8577763 + AT_rich Low_complexity Low_complexity 1 24 0 1 680 26 0 0 0 chr2R 12569273 12569299 -8577409 + AT_rich Low_complexity Low_complexity 1 26 0 1 680 201 121 0 0 chr2R 12570549 12570582 -8576126 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 680 195 139 0 0 chr2R 12572459 12572495 -8574213 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 680 222 91 0 0 chr2R 12572916 12572949 -8573759 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 680 239 143 0 0 chr2R 12575815 12575850 -8570858 - DNAREP1_DM LINE Penelope 0 594 560 1 680 289 214 0 0 chr2R 12575992 12576048 -8570660 - DNAREP1_DM LINE Penelope -538 56 1 1 680 222 136 0 0 chr2R 12582618 12582662 -8564046 + (CTG)n Simple_repeat Simple_repeat 2 45 0 1 10 186 71 0 0 chr2R 12582907 12582935 -8563773 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 681 229 254 32 0 chr2R 12583361 12583424 -8563284 + (CTG)n Simple_repeat Simple_repeat 1 65 0 1 681 195 100 0 0 chr2R 12583775 12583805 -8562903 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 681 267 54 0 0 chr2R 12589895 12589932 -8556776 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 681 183 129 0 0 chr2R 12595483 12595514 -8551194 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 1 681 210 191 0 0 chr2R 12598097 12598144 -8548564 + (CAGA)n Simple_repeat Simple_repeat 1 47 0 1 681 201 39 0 0 chr2R 12598182 12598208 -8548500 + (CAGC)n Simple_repeat Simple_repeat 1 26 0 1 681 22 0 0 0 chr2R 12598491 12598513 -8548195 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 228 67 0 0 chr2R 12604986 12605016 -8541692 + (CAT)n Simple_repeat Simple_repeat 2 31 0 1 681 22 35 0 0 chr2R 12607030 12607059 -8539649 + AT_rich Low_complexity Low_complexity 1 29 0 1 681 29 0 0 0 chr2R 12608932 12608961 -8537747 + AT_rich Low_complexity Low_complexity 1 29 0 1 681 199 122 0 39 chr2R 12611113 12611164 -8535544 + T-rich Low_complexity Low_complexity 2 50 0 1 681 21 0 0 0 chr2R 12611640 12611661 -8535047 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 201 164 36 18 chr2R 12612090 12612146 -8534562 + A-rich Low_complexity Low_complexity 3 59 0 1 681 21 0 0 0 chr2R 12617027 12617048 -8529660 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 22 35 0 0 chr2R 12617880 12617909 -8528799 + AT_rich Low_complexity Low_complexity 1 29 0 1 681 213 196 0 0 chr2R 12618069 12618115 -8528593 + A-rich Low_complexity Low_complexity 3 48 0 1 681 201 162 0 0 chr2R 12618720 12618757 -8527951 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 681 236 111 47 16 chr2R 12619478 12619542 -8527166 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 681 23 78 0 0 chr2R 12619830 12619881 -8526827 + AT_rich Low_complexity Low_complexity 1 51 0 1 681 288 194 0 0 chr2R 12620829 12620901 -8525807 + ROO_I LTR Pao 652 723 -7533 1 681 232 271 0 0 chr2R 12620861 12620920 -8525788 + DOC3_DM LINE Jockey 529 587 -4153 1 681 195 42 0 0 chr2R 12626169 12626193 -8520515 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1 681 256 191 14 29 chr2R 12628298 12628368 -8518340 + (TTG)n Simple_repeat Simple_repeat 1 69 0 1 681 24 0 0 0 chr2R 12629586 12629610 -8517098 + AT_rich Low_complexity Low_complexity 1 24 0 1 681 21 57 0 0 chr2R 12634207 12634242 -8512466 + AT_rich Low_complexity Low_complexity 1 35 0 1 681 21 36 0 0 chr2R 12634268 12634296 -8512412 + AT_rich Low_complexity Low_complexity 1 28 0 1 681 25 0 0 0 chr2R 12649344 12649369 -8497339 + AT_rich Low_complexity Low_complexity 1 25 0 1 681 21 89 0 0 chr2R 12649955 12650011 -8496697 + AT_rich Low_complexity Low_complexity 1 56 0 1 681 189 74 0 0 chr2R 12651380 12651407 -8495301 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 681 23 0 0 0 chr2R 12653629 12653652 -8493056 + AT_rich Low_complexity Low_complexity 1 23 0 1 681 228 35 0 0 chr2R 12655229 12655258 -8491450 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 681 186 43 0 0 chr2R 12657664 12657687 -8489021 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 1 681 27 49 0 0 chr2R 12657883 12657924 -8488784 + AT_rich Low_complexity Low_complexity 1 41 0 1 681 33 0 0 0 chr2R 12660226 12660259 -8486449 + AT_rich Low_complexity Low_complexity 1 33 0 1 681 21 36 0 0 chr2R 12660265 12660293 -8486415 + AT_rich Low_complexity Low_complexity 1 28 0 1 681 25 51 0 0 chr2R 12666048 12666087 -8480621 + AT_rich Low_complexity Low_complexity 1 39 0 1 681 219 88 0 0 chr2R 12667777 12667811 -8478897 + (CAG)n Simple_repeat Simple_repeat 1 34 0 1 681 23 33 0 0 chr2R 12670650 12670680 -8476028 + AT_rich Low_complexity Low_complexity 1 30 0 1 681 26 30 0 0 chr2R 12670969 12671002 -8475706 + AT_rich Low_complexity Low_complexity 1 33 0 1 681 189 0 0 0 chr2R 12679166 12679187 -8467521 + (CAA)n Simple_repeat Simple_repeat 3 23 0 1 681 22 35 0 0 chr2R 12681855 12681884 -8464824 + AT_rich Low_complexity Low_complexity 1 29 0 1 681 25 51 0 0 chr2R 12686679 12686718 -8459990 + AT_rich Low_complexity Low_complexity 1 39 0 1 681 237 185 18 36 chr2R 12686920 12686976 -8459732 + Gypsy2_I LTR Gypsy 361 415 -5720 1 681 27 0 0 0 chr2R 12689835 12689862 -8456846 + AT_rich Low_complexity Low_complexity 1 27 0 1 681 21 36 0 0 chr2R 12694887 12694915 -8451793 + AT_rich Low_complexity Low_complexity 1 28 0 1 681 26 0 0 0 chr2R 12695739 12695765 -8450943 + AT_rich Low_complexity Low_complexity 1 26 0 1 681 249 83 0 0 chr2R 12696316 12696352 -8450356 + (CAATT)n Simple_repeat Simple_repeat 5 40 0 1 681 279 0 0 0 chr2R 12697634 12697665 -8449043 + (GTATG)n Simple_repeat Simple_repeat 4 34 0 1 681 24 32 0 0 chr2R 12699764 12699795 -8446913 + AT_rich Low_complexity Low_complexity 1 31 0 2 681 21 0 0 0 chr2R 12700865 12700886 -8445822 + AT_rich Low_complexity Low_complexity 1 21 0 2 681 258 56 0 0 chr2R 12701812 12701848 -8444860 + (T)n Simple_repeat Simple_repeat 1 36 0 2 681 228 67 0 0 chr2R 12702909 12702939 -8443769 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 681 209 184 0 0 chr2R 12708099 12708137 -8438571 + (TCG)n Simple_repeat Simple_repeat 2 39 0 2 681 208 211 14 27 chr2R 12708841 12708914 -8437794 + A-rich Low_complexity Low_complexity 6 77 0 2 681 26 64 0 0 chr2R 12710447 12710494 -8436214 + AT_rich Low_complexity Low_complexity 1 47 0 2 681 28 0 0 0 chr2R 12711914 12711942 -8434766 + AT_rich Low_complexity Low_complexity 1 28 0 2 681 235 286 36 0 chr2R 12712252 12712336 -8434372 + (TCCG)n Simple_repeat Simple_repeat 1 87 0 2 682 21 0 0 0 chr2R 12714068 12714089 -8432619 + AT_rich Low_complexity Low_complexity 1 21 0 2 682 21 36 0 0 chr2R 12714724 12714752 -8431956 + AT_rich Low_complexity Low_complexity 1 28 0 2 682 198 0 0 0 chr2R 12715710 12715732 -8430976 + (AAATG)n Simple_repeat Simple_repeat 4 25 0 2 682 204 292 0 0 chr2R 12716645 12716717 -8429991 + A-rich Low_complexity Low_complexity 1 72 0 2 682 207 0 0 0 chr2R 12716828 12716851 -8429857 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 682 234 191 0 0 chr2R 12718563 12718610 -8428098 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 682 207 125 0 0 chr2R 12719627 12719667 -8427041 + (TTTCG)n Simple_repeat Simple_repeat 2 41 0 2 682 405 0 0 0 chr2R 12721372 12721417 -8425291 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 682 233 132 0 0 chr2R 12727956 12727994 -8418714 + DNAREP1_DM LINE Penelope 25 62 -532 2 682 234 236 135 24 chr2R 12729293 12729419 -8417289 + DNAREP1_DM LINE Penelope 439 578 -16 2 682 186 43 0 0 chr2R 12730109 12730132 -8416576 + (TCCCC)n Simple_repeat Simple_repeat 2 24 0 2 682 22 35 0 0 chr2R 12730625 12730654 -8416054 + AT_rich Low_complexity Low_complexity 1 29 0 2 682 192 167 0 0 chr2R 12733250 12733298 -8413410 + A-rich Low_complexity Low_complexity 1 48 0 2 682 21 36 0 0 chr2R 12742870 12742898 -8403810 + AT_rich Low_complexity Low_complexity 1 28 0 2 682 22 0 0 0 chr2R 12743340 12743362 -8403346 + AT_rich Low_complexity Low_complexity 1 22 0 2 682 22 35 0 0 chr2R 12745107 12745136 -8401572 + AT_rich Low_complexity Low_complexity 1 29 0 2 682 288 308 0 0 chr2R 12745427 12745534 -8401174 + (CGA)n Simple_repeat Simple_repeat 2 108 0 2 682 250 227 0 0 chr2R 12745927 12745993 -8400715 + GA-rich Low_complexity Low_complexity 1 66 0 2 682 24 0 0 0 chr2R 12748964 12748988 -8397720 + AT_rich Low_complexity Low_complexity 1 24 0 2 682 262 85 128 0 chr2R 12749965 12750012 -8396696 + DNAREP1_DM LINE Penelope 1 53 -541 2 682 22 35 0 0 chr2R 12750661 12750690 -8396018 + AT_rich Low_complexity Low_complexity 1 29 0 2 682 234 105 0 0 chr2R 12751127 12751165 -8395543 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 682 180 158 0 0 chr2R 12752422 12752460 -8394248 + (CCG)n Simple_repeat Simple_repeat 3 40 0 2 682 208 214 0 0 chr2R 12752710 12752752 -8393956 + (CTG)n Simple_repeat Simple_repeat 1 42 0 2 682 220 250 0 0 chr2R 12754531 12754579 -8392129 + (CCG)n Simple_repeat Simple_repeat 3 50 0 2 682 23 54 0 0 chr2R 12758316 12758353 -8388355 + AT_rich Low_complexity Low_complexity 1 37 0 2 682 22 0 0 0 chr2R 12758703 12758725 -8387983 + AT_rich Low_complexity Low_complexity 1 22 0 2 682 36 40 0 0 chr2R 12759262 12759312 -8387396 + AT_rich Low_complexity Low_complexity 1 50 0 2 682 34 55 0 0 chr2R 12760350 12760405 -8386303 + AT_rich Low_complexity Low_complexity 1 55 0 2 682 22 0 0 0 chr2R 12762408 12762430 -8384278 + AT_rich Low_complexity Low_complexity 1 22 0 2 682 214 263 0 0 chr2R 12770134 12770191 -8376517 + T-rich Low_complexity Low_complexity 4 60 0 2 682 21 36 0 0 chr2R 12775686 12775714 -8370994 + AT_rich Low_complexity Low_complexity 1 28 0 2 682 183 129 0 0 chr2R 12778741 12778772 -8367936 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 2 682 207 160 20 20 chr2R 12779393 12779444 -8367264 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 682 195 42 0 0 chr2R 12784980 12785004 -8361704 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 682 192 40 0 0 chr2R 12791790 12791815 -8354893 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 682 186 189 0 0 chr2R 12793587 12793624 -8353084 + A-rich Low_complexity Low_complexity 5 41 0 2 682 204 40 0 0 chr2R 12793856 12793881 -8352827 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 682 23 0 0 0 chr2R 12798708 12798731 -8347977 + AT_rich Low_complexity Low_complexity 1 23 0 2 682 33 73 0 0 chr2R 12802871 12802939 -8343769 + AT_rich Low_complexity Low_complexity 1 68 0 2 682 36 53 0 0 chr2R 12807116 12807173 -8339535 + AT_rich Low_complexity Low_complexity 1 57 0 2 682 25 31 0 0 chr2R 12809503 12809535 -8337173 + AT_rich Low_complexity Low_complexity 1 32 0 2 682 24 0 0 0 chr2R 12809581 12809605 -8337103 + AT_rich Low_complexity Low_complexity 1 24 0 2 682 29 0 0 0 chr2R 12809978 12810007 -8336701 + AT_rich Low_complexity Low_complexity 1 29 0 2 682 22 0 0 0 chr2R 12811339 12811361 -8335347 + AT_rich Low_complexity Low_complexity 1 22 0 2 682 180 77 0 0 chr2R 12813932 12813958 -8332750 + (CAA)n Simple_repeat Simple_repeat 1 26 0 2 682 273 227 0 0 chr2R 12814034 12814100 -8332608 + A-rich Low_complexity Low_complexity 1 66 0 2 682 219 214 0 0 chr2R 12816189 12816259 -8330449 + A-rich Low_complexity Low_complexity 1 70 0 2 682 28 71 0 0 chr2R 12817394 12817450 -8329258 + AT_rich Low_complexity Low_complexity 1 56 0 2 682 27 0 0 0 chr2R 12818218 12818245 -8328463 + AT_rich Low_complexity Low_complexity 1 27 0 2 682 228 67 0 0 chr2R 12819908 12819938 -8326770 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 682 243 0 0 0 chr2R 12820220 12820247 -8326461 + (A)n Simple_repeat Simple_repeat 1 27 0 2 682 201 132 0 0 chr2R 12820279 12820317 -8326391 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 682 27 49 0 0 chr2R 12820757 12820798 -8325910 + AT_rich Low_complexity Low_complexity 1 41 0 2 682 213 94 0 0 chr2R 12822169 12822201 -8324507 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 682 219 152 0 0 chr2R 12824265 12824311 -8322397 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 682 25 51 0 0 chr2R 12825855 12825894 -8320814 + AT_rich Low_complexity Low_complexity 1 39 0 2 682 21 57 0 0 chr2R 12826515 12826550 -8320158 + AT_rich Low_complexity Low_complexity 1 35 0 2 682 228 67 0 0 chr2R 12827419 12827449 -8319259 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 682 180 77 0 0 chr2R 12828009 12828035 -8318673 + (TTTCG)n Simple_repeat Simple_repeat 2 27 0 2 682 24 53 0 0 chr2R 12831019 12831057 -8315651 + AT_rich Low_complexity Low_complexity 1 38 0 2 682 21 36 0 0 chr2R 12831646 12831674 -8315034 + AT_rich Low_complexity Low_complexity 1 28 0 2 682 25 65 0 0 chr2R 12831992 12832038 -8314670 + AT_rich Low_complexity Low_complexity 1 46 0 2 682 180 0 0 0 chr2R 12833046 12833066 -8313642 + (CAGT)n Simple_repeat Simple_repeat 1 20 0 2 682 25 31 0 0 chr2R 12835803 12835835 -8310873 + AT_rich Low_complexity Low_complexity 1 32 0 2 682 23 0 0 0 chr2R 12842835 12842858 -8303850 + AT_rich Low_complexity Low_complexity 1 23 0 2 682 21 57 0 0 chr2R 12842911 12842946 -8303762 + AT_rich Low_complexity Low_complexity 1 35 0 2 682 23 0 0 0 chr2R 12843031 12843054 -8303654 + AT_rich Low_complexity Low_complexity 1 23 0 2 683 25 75 0 0 chr2R 12846398 12846451 -8300257 + AT_rich Low_complexity Low_complexity 1 53 0 2 683 21 36 0 0 chr2R 12850743 12850771 -8295937 + AT_rich Low_complexity Low_complexity 1 28 0 2 683 192 40 0 0 chr2R 12852117 12852142 -8294566 + (ATG)n Simple_repeat Simple_repeat 3 27 0 2 683 224 200 0 0 chr2R 12853569 12853609 -8293099 + (TGAG)n Simple_repeat Simple_repeat 1 40 0 2 683 26 0 0 0 chr2R 12857045 12857071 -8289637 + AT_rich Low_complexity Low_complexity 1 26 0 2 683 33 73 0 0 chr2R 12859036 12859104 -8287604 + AT_rich Low_complexity Low_complexity 1 68 0 2 683 23 0 0 0 chr2R 12861937 12861960 -8284748 + AT_rich Low_complexity Low_complexity 1 23 0 2 683 29 70 0 0 chr2R 12862658 12862715 -8283993 + AT_rich Low_complexity Low_complexity 1 57 0 2 683 23 33 0 0 chr2R 12862741 12862771 -8283937 + AT_rich Low_complexity Low_complexity 1 30 0 2 683 230 0 0 32 chr2R 12864362 12864393 -8282315 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2 683 23 33 0 0 chr2R 12867595 12867625 -8279083 + AT_rich Low_complexity Low_complexity 1 30 0 2 683 23 54 0 0 chr2R 12869573 12869610 -8277098 + AT_rich Low_complexity Low_complexity 1 37 0 2 683 26 0 0 0 chr2R 12871184 12871210 -8275498 + AT_rich Low_complexity Low_complexity 1 26 0 2 683 21 0 0 0 chr2R 12875049 12875070 -8271638 + AT_rich Low_complexity Low_complexity 1 21 0 2 683 222 37 0 0 chr2R 12879110 12879137 -8267571 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 683 23 0 0 0 chr2R 12879371 12879394 -8267314 + AT_rich Low_complexity Low_complexity 1 23 0 2 683 23 0 0 0 chr2R 12903751 12903774 -8242934 + AT_rich Low_complexity Low_complexity 1 23 0 2 683 202 200 0 0 chr2R 12904556 12904596 -8242112 + (CACCAT)n Simple_repeat Simple_repeat 1 40 0 2 683 28 61 0 0 chr2R 12905416 12905465 -8241243 + AT_rich Low_complexity Low_complexity 1 49 0 2 683 180 167 0 0 chr2R 12905708 12905756 -8240952 + (CTG)n Simple_repeat Simple_repeat 1 48 0 2 683 216 254 0 0 chr2R 12905991 12906050 -8240658 + (ATGGTG)n Simple_repeat Simple_repeat 4 62 0 2 683 58 60 0 0 chr2R 12907232 12907332 -8239376 + AT_rich Low_complexity Low_complexity 1 100 0 2 683 1208 151 99 22 chr2R 12908504 12908797 -8237911 - DNAREP1_DM LINE Penelope -137 457 3 2 683 31 26 0 0 chr2R 12918552 12918590 -8228118 + AT_rich Low_complexity Low_complexity 1 38 0 2 683 186 143 0 0 chr2R 12923849 12923884 -8222824 + (CAG)n Simple_repeat Simple_repeat 1 35 0 2 683 24 32 0 0 chr2R 12927741 12927772 -8218936 + AT_rich Low_complexity Low_complexity 1 31 0 2 683 32 26 0 0 chr2R 12929017 12929056 -8217652 + AT_rich Low_complexity Low_complexity 1 39 0 2 683 189 196 0 0 chr2R 12939943 12939994 -8206714 + GA-rich Low_complexity Low_complexity 2 52 0 2 683 232 235 0 0 chr2R 12940069 12940120 -8206588 + GA-rich Low_complexity Low_complexity 5 55 0 2 683 22 70 0 0 chr2R 12942010 12942053 -8204655 + AT_rich Low_complexity Low_complexity 1 43 0 2 683 189 74 0 0 chr2R 12943810 12943837 -8202871 + (TAA)n Simple_repeat Simple_repeat 3 29 0 2 683 23 33 0 0 chr2R 12953726 12953756 -8192952 + AT_rich Low_complexity Low_complexity 1 30 0 2 683 248 222 29 80 chr2R 12954560 12954697 -8192011 - ROO_I LTR Pao -7524 732 603 2 683 303 210 0 0 chr2R 12963080 12963142 -8183566 - ROO_I LTR Pao -7510 746 685 2 683 244 209 0 15 chr2R 12963230 12963298 -8183410 - ROO_I LTR Pao -7528 728 662 2 683 195 146 0 0 chr2R 12966022 12966063 -8180645 + (T)n Simple_repeat Simple_repeat 1 41 0 2 683 28 48 0 0 chr2R 12966564 12966606 -8180102 + AT_rich Low_complexity Low_complexity 1 42 0 2 683 26 74 0 0 chr2R 12967899 12967953 -8178755 + AT_rich Low_complexity Low_complexity 1 54 0 2 683 25 0 0 0 chr2R 12968378 12968403 -8178305 + AT_rich Low_complexity Low_complexity 1 25 0 2 683 26 0 0 0 chr2R 12971106 12971132 -8175576 + AT_rich Low_complexity Low_complexity 1 26 0 2 683 21 0 0 0 chr2R 12975016 12975037 -8171671 + AT_rich Low_complexity Low_complexity 1 21 0 2 683 22 35 0 0 chr2R 12975938 12975967 -8170741 + AT_rich Low_complexity Low_complexity 1 29 0 2 684 26 30 0 0 chr2R 12980632 12980665 -8166043 + AT_rich Low_complexity Low_complexity 1 33 0 2 684 378 0 0 0 chr2R 12985074 12985116 -8161592 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 684 21 36 0 0 chr2R 12985955 12985983 -8160725 + AT_rich Low_complexity Low_complexity 1 28 0 2 684 189 132 0 0 chr2R 12989373 12989411 -8157297 + (T)n Simple_repeat Simple_repeat 1 38 0 2 684 21 0 0 0 chr2R 12989613 12989634 -8157074 + AT_rich Low_complexity Low_complexity 1 21 0 2 684 37 23 0 0 chr2R 12993216 12993260 -8153448 + AT_rich Low_complexity Low_complexity 1 44 0 2 684 22 0 0 0 chr2R 12998280 12998302 -8148406 + AT_rich Low_complexity Low_complexity 1 22 0 2 684 22 35 0 0 chr2R 12998380 12998409 -8148299 + AT_rich Low_complexity Low_complexity 1 29 0 2 684 186 43 0 0 chr2R 13018020 13018043 -8128665 + (CAGAG)n Simple_repeat Simple_repeat 4 26 0 2 684 373 171 0 54 chr2R 13020139 13020213 -8126495 - DNAREP1_DM LINE Penelope -124 470 401 2 684 257 73 195 0 chr2R 13020716 13020757 -8125951 + DNAREP1_DM LINE Penelope 536 584 -10 2 684 37 39 0 0 chr2R 13022339 13022390 -8124318 + AT_rich Low_complexity Low_complexity 1 51 0 2 684 280 139 62 100 chr2R 13022689 13022769 -8123939 - Copia_I LTR Copia -76 4517 4441 2 684 25 0 0 0 chr2R 13023051 13023076 -8123632 + AT_rich Low_complexity Low_complexity 1 25 0 2 684 23 68 0 0 chr2R 13024923 13024967 -8121741 + AT_rich Low_complexity Low_complexity 1 44 0 2 684 246 286 88 48 chr2R 13033371 13033518 -8113190 + G5_DM LINE Jockey 1490 1642 -3214 2 684 699 109 130 87 chr2R 13033519 13033680 -8113028 + G5A_DM LINE Jockey 2666 2833 -8 2 684 45943 4 11 0 chr2R 13034809 13039768 -8106940 - LINEJ1_DM LINE Jockey 0 5020 7 2 684 25 0 0 0 chr2R 13041500 13041525 -8105183 + AT_rich Low_complexity Low_complexity 1 25 0 2 684 201 39 0 0 chr2R 13046157 13046183 -8100525 + (TGG)n Simple_repeat Simple_repeat 2 27 0 2 684 22 35 0 0 chr2R 13047361 13047390 -8099318 + AT_rich Low_complexity Low_complexity 1 29 0 2 684 27 0 0 0 chr2R 13047599 13047626 -8099082 + AT_rich Low_complexity Low_complexity 1 27 0 2 684 270 342 0 54 chr2R 13047746 13047913 -8098795 + G-rich Low_complexity Low_complexity 3 160 0 2 684 201 350 0 29 chr2R 13047956 13048059 -8098649 + G-rich Low_complexity Low_complexity 3 102 0 2 684 21 0 0 0 chr2R 13049958 13049979 -8096729 + AT_rich Low_complexity Low_complexity 1 21 0 2 684 24 53 0 0 chr2R 13052481 13052519 -8094189 + AT_rich Low_complexity Low_complexity 1 38 0 2 684 270 0 0 0 chr2R 13052539 13052569 -8094139 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 684 337 299 22 54 chr2R 13053278 13053462 -8093246 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 2 684 220 286 48 48 chr2R 13053477 13053602 -8093106 + (CTGGGG)n Simple_repeat Simple_repeat 2 126 0 2 684 354 319 35 35 chr2R 13053638 13053810 -8092898 + (CTGGGG)n Simple_repeat Simple_repeat 1 172 0 2 684 276 77 0 0 chr2R 13054229 13054268 -8092440 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 2 684 23 0 0 0 chr2R 13055703 13055726 -8090982 + AT_rich Low_complexity Low_complexity 1 23 0 2 684 180 0 0 0 chr2R 13063248 13063268 -8083440 + (T)n Simple_repeat Simple_repeat 1 20 0 2 684 2009 13 0 0 chr2R 13063935 13064159 -8082549 - DIVER_LTR LTR Pao 0 224 1 2 684 52452 3 0 0 chr2R 13064159 13069801 -8076907 - DIVER_I LTR Pao 0 5643 1 2 684 2050 5 0 0 chr2R 13069822 13070046 -8076662 - DIVER_LTR LTR Pao 0 224 1 2 684 25 31 0 0 chr2R 13073211 13073243 -8073465 + AT_rich Low_complexity Low_complexity 1 32 0 2 684 180 0 0 0 chr2R 13073303 13073323 -8073385 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 2 684 225 146 0 0 chr2R 13073714 13073762 -8072946 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 684 255 61 0 0 chr2R 13077352 13077385 -8069323 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 684 21 36 0 0 chr2R 13079250 13079278 -8067430 + AT_rich Low_complexity Low_complexity 1 28 0 2 684 23 0 0 0 chr2R 13082634 13082657 -8064051 + AT_rich Low_complexity Low_complexity 1 23 0 2 684 28 48 0 0 chr2R 13084631 13084673 -8062035 + AT_rich Low_complexity Low_complexity 1 42 0 2 684 230 0 0 32 chr2R 13085389 13085420 -8061288 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 684 21 0 0 0 chr2R 13087013 13087034 -8059674 + AT_rich Low_complexity Low_complexity 1 21 0 2 684 21 36 0 0 chr2R 13088674 13088702 -8058006 + AT_rich Low_complexity Low_complexity 1 28 0 2 684 31 0 0 0 chr2R 13090503 13090534 -8056174 + AT_rich Low_complexity Low_complexity 1 31 0 2 684 22 56 0 0 chr2R 13095016 13095052 -8051656 + AT_rich Low_complexity Low_complexity 1 36 0 2 684 32 26 0 0 chr2R 13095459 13095498 -8051210 + AT_rich Low_complexity Low_complexity 1 39 0 2 684 206 239 0 0 chr2R 13097196 13097242 -8049466 + CT-rich Low_complexity Low_complexity 2 47 0 2 684 23 0 0 0 chr2R 13098051 13098074 -8048634 + AT_rich Low_complexity Low_complexity 1 23 0 2 684 23 0 0 0 chr2R 13103036 13103059 -8043649 + AT_rich Low_complexity Low_complexity 1 23 0 2 684 32 81 0 0 chr2R 13103142 13103216 -8043492 + AT_rich Low_complexity Low_complexity 1 74 0 2 684 215 241 0 0 chr2R 13105096 13105150 -8041558 + (CAT)n Simple_repeat Simple_repeat 1 54 0 2 684 22 0 0 0 chr2R 13106752 13106774 -8039934 + AT_rich Low_complexity Low_complexity 1 22 0 2 685 225 94 0 0 chr2R 13108912 13108944 -8037764 + (TAAAA)n Simple_repeat Simple_repeat 5 36 0 2 685 25 65 0 0 chr2R 13109137 13109183 -8037525 + AT_rich Low_complexity Low_complexity 1 46 0 2 685 258 116 0 0 chr2R 13112833 13112876 -8033832 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 685 258 156 0 0 chr2R 13112987 13113032 -8033676 + (CTG)n Simple_repeat Simple_repeat 3 47 0 2 685 21 0 0 0 chr2R 13123083 13123104 -8023604 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 21 0 0 0 chr2R 13123221 13123242 -8023466 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 2297 0 0 0 chr2R 13124068 13124344 -8022364 + Copia_LTR LTR Copia 1 276 0 2 685 39242 1 0 0 chr2R 13124344 13128938 -8017770 + Copia_I LTR Copia 1 4593 0 2 685 2297 0 0 0 chr2R 13128938 13129214 -8017494 + Copia_LTR LTR Copia 1 276 0 2 685 22 0 0 0 chr2R 13130424 13130446 -8016262 + AT_rich Low_complexity Low_complexity 1 22 0 2 685 23 0 0 0 chr2R 13131316 13131339 -8015369 + AT_rich Low_complexity Low_complexity 1 23 0 2 685 245 246 0 17 chr2R 13131562 13131620 -8015088 + (CAG)n Simple_repeat Simple_repeat 3 59 0 2 685 23 68 0 0 chr2R 13135014 13135058 -8011650 + AT_rich Low_complexity Low_complexity 1 44 0 2 685 230 297 0 0 chr2R 13135523 13135587 -8011121 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 685 22 35 0 0 chr2R 13136507 13136536 -8010172 + AT_rich Low_complexity Low_complexity 1 29 0 2 685 333 47 0 0 chr2R 13139267 13139310 -8007398 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 2 685 201 74 0 0 chr2R 13139421 13139448 -8007260 + (ATG)n Simple_repeat Simple_repeat 2 28 0 2 685 203 179 0 0 chr2R 13139815 13139854 -8006854 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 685 195 42 0 0 chr2R 13141741 13141765 -8004943 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 2 685 183 80 0 0 chr2R 13142200 13142225 -8004483 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 685 28 29 0 0 chr2R 13143855 13143890 -8002818 + AT_rich Low_complexity Low_complexity 1 35 0 2 685 21 0 0 0 chr2R 13144111 13144132 -8002576 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 228 35 0 0 chr2R 13147255 13147284 -7999424 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 685 189 74 0 0 chr2R 13147595 13147622 -7999086 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 685 25 0 0 0 chr2R 13152008 13152033 -7994675 + AT_rich Low_complexity Low_complexity 1 25 0 2 685 28 0 0 0 chr2R 13152210 13152238 -7994470 + AT_rich Low_complexity Low_complexity 1 28 0 2 685 222 216 0 0 chr2R 13153646 13153697 -7993011 + (CAA)n Simple_repeat Simple_repeat 1 51 0 2 685 201 39 0 0 chr2R 13157101 13157127 -7989581 + (TTTTTG)n Simple_repeat Simple_repeat 1 26 0 2 685 26 0 0 0 chr2R 13157426 13157452 -7989256 + AT_rich Low_complexity Low_complexity 1 26 0 2 685 24 0 0 0 chr2R 13159952 13159976 -7986732 + AT_rich Low_complexity Low_complexity 1 24 0 2 685 225 0 0 0 chr2R 13161032 13161057 -7985651 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 685 21 0 0 0 chr2R 13162118 13162139 -7984569 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 183 42 0 0 chr2R 13162783 13162807 -7983901 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 685 2811 20 0 3 chr2R 13164770 13165120 -7981588 + LINEJ1_DM LINE Jockey 4659 5007 -13 2 685 180 0 0 0 chr2R 13166068 13166088 -7980620 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 685 246 156 0 0 chr2R 13166365 13166410 -7980298 + (TATG)n Simple_repeat Simple_repeat 4 48 0 2 685 225 94 0 0 chr2R 13166502 13166534 -7980174 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 685 23 0 0 0 chr2R 13168044 13168067 -7978641 + AT_rich Low_complexity Low_complexity 1 23 0 2 685 23 0 0 0 chr2R 13172010 13172033 -7974675 + AT_rich Low_complexity Low_complexity 1 23 0 2 685 29 0 0 0 chr2R 13173268 13173297 -7973411 + AT_rich Low_complexity Low_complexity 1 29 0 2 685 195 42 0 0 chr2R 13176120 13176144 -7970564 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2 685 27 62 0 0 chr2R 13177495 13177543 -7969165 + AT_rich Low_complexity Low_complexity 1 48 0 2 685 192 135 0 0 chr2R 13180850 13180887 -7965821 + (GGAAA)n Simple_repeat Simple_repeat 3 39 0 2 685 22 0 0 0 chr2R 13183198 13183220 -7963488 + AT_rich Low_complexity Low_complexity 1 22 0 2 685 21 0 0 0 chr2R 13185382 13185403 -7961305 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 23 0 0 0 chr2R 13186066 13186089 -7960619 + AT_rich Low_complexity Low_complexity 1 23 0 2 685 24 32 0 0 chr2R 13187038 13187069 -7959639 + AT_rich Low_complexity Low_complexity 1 31 0 2 685 24 0 0 0 chr2R 13187642 13187666 -7959042 + AT_rich Low_complexity Low_complexity 1 24 0 2 685 198 143 0 0 chr2R 13188251 13188286 -7958422 + (CTG)n Simple_repeat Simple_repeat 3 37 0 2 685 195 125 0 0 chr2R 13190197 13190237 -7956471 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 685 207 100 0 0 chr2R 13191450 13191480 -7955228 + (CGTG)n Simple_repeat Simple_repeat 1 30 0 2 685 238 254 0 0 chr2R 13191582 13191645 -7955063 + GA-rich Low_complexity Low_complexity 1 63 0 2 685 216 158 0 0 chr2R 13191729 13191767 -7954941 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 685 210 71 0 0 chr2R 13196887 13196915 -7949793 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 2 685 180 0 0 0 chr2R 13199782 13199802 -7946906 + (T)n Simple_repeat Simple_repeat 1 20 0 2 685 23 0 0 0 chr2R 13200469 13200492 -7946216 + GC_rich Low_complexity Low_complexity 1 23 0 2 685 212 250 0 0 chr2R 13200836 13200884 -7945824 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 685 26 50 0 0 chr2R 13202145 13202185 -7944523 + AT_rich Low_complexity Low_complexity 1 40 0 2 685 192 125 0 0 chr2R 13203174 13203206 -7943502 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 685 288 111 0 0 chr2R 13203909 13203954 -7942754 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 685 291 140 0 0 chr2R 13205097 13205147 -7941561 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 685 285 109 0 0 chr2R 13205223 13205269 -7941439 + (TTG)n Simple_repeat Simple_repeat 2 47 0 2 685 351 89 0 0 chr2R 13208059 13208115 -7938593 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 685 230 174 31 113 chr2R 13211067 13211164 -7935544 + T-rich Low_complexity Low_complexity 5 93 0 2 685 22 0 0 0 chr2R 13211694 13211716 -7934992 + AT_rich Low_complexity Low_complexity 1 22 0 2 685 180 0 0 0 chr2R 13211790 13211810 -7934898 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 685 26 0 0 0 chr2R 13215499 13215525 -7931183 + AT_rich Low_complexity Low_complexity 1 26 0 2 685 189 0 0 0 chr2R 13217433 13217454 -7929254 + (CTGTG)n Simple_repeat Simple_repeat 5 25 0 2 685 21 0 0 0 chr2R 13217539 13217560 -7929148 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 223 282 0 34 chr2R 13218259 13218347 -7928361 + (TATG)n Simple_repeat Simple_repeat 3 87 0 2 685 23 0 0 0 chr2R 13222560 13222583 -7924125 + AT_rich Low_complexity Low_complexity 1 23 0 2 685 186 43 0 0 chr2R 13225470 13225493 -7921215 + (TTCGG)n Simple_repeat Simple_repeat 2 24 0 2 685 202 205 0 0 chr2R 13231056 13231095 -7915613 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 685 201 138 0 0 chr2R 13231317 13231346 -7915362 + (CAAGT)n Simple_repeat Simple_repeat 1 29 0 2 685 211 233 0 0 chr2R 13232490 13232533 -7914175 + (ATG)n Simple_repeat Simple_repeat 1 43 0 2 685 187 93 47 0 chr2R 13232625 13232668 -7914040 + (TTTTTA)n Simple_repeat Simple_repeat 3 47 0 2 685 237 119 0 0 chr2R 13233579 13233621 -7913087 + (A)n Simple_repeat Simple_repeat 1 42 0 2 685 210 71 0 0 chr2R 13233858 13233886 -7912822 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 686 186 174 0 0 chr2R 13238494 13238540 -7908168 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 686 216 67 0 0 chr2R 13238867 13238897 -7907811 + (CCA)n Simple_repeat Simple_repeat 1 30 0 2 686 222 37 0 0 chr2R 13241239 13241266 -7905442 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 686 204 156 0 22 chr2R 13242318 13242364 -7904344 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 686 21 0 0 0 chr2R 13242950 13242971 -7903737 + AT_rich Low_complexity Low_complexity 1 21 0 2 686 22 0 0 0 chr2R 13243137 13243159 -7903549 + AT_rich Low_complexity Low_complexity 1 22 0 2 686 210 71 0 0 chr2R 13243637 13243665 -7903043 + (GA)n Simple_repeat Simple_repeat 2 29 0 2 686 218 204 0 0 chr2R 13246768 13246812 -7899896 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 686 239 152 0 33 chr2R 13246837 13246898 -7899810 + (CAA)n Simple_repeat Simple_repeat 1 59 0 2 686 321 89 0 0 chr2R 13246947 13246992 -7899716 + (CCG)n Simple_repeat Simple_repeat 3 47 0 2 686 180 231 0 0 chr2R 13247782 13247860 -7898848 + (CA)n Simple_repeat Simple_repeat 2 79 0 2 686 26 30 0 0 chr2R 13249004 13249037 -7897671 + AT_rich Low_complexity Low_complexity 1 33 0 2 686 395 99 0 36 chr2R 13249613 13249697 -7897011 + (CAA)n Simple_repeat Simple_repeat 1 81 0 2 686 245 364 6 6 chr2R 13249709 13249886 -7896822 + (CAA)n Simple_repeat Simple_repeat 3 179 0 2 686 195 42 0 0 chr2R 13250174 13250198 -7896510 + (CAG)n Simple_repeat Simple_repeat 3 26 0 2 686 243 176 20 0 chr2R 13250384 13250435 -7896273 + (CAG)n Simple_repeat Simple_repeat 2 53 0 2 686 234 305 0 0 chr2R 13250543 13250625 -7896083 + (CCCCAG)n Simple_repeat Simple_repeat 4 85 0 2 686 29 47 0 0 chr2R 13253652 13253695 -7893013 + AT_rich Low_complexity Low_complexity 1 43 0 2 686 215 103 0 25 chr2R 13254265 13254305 -7892403 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 2 686 24 0 0 0 chr2R 13255281 13255305 -7891403 + AT_rich Low_complexity Low_complexity 1 24 0 2 686 23 54 0 0 chr2R 13255501 13255538 -7891170 + AT_rich Low_complexity Low_complexity 1 37 0 2 686 240 100 0 0 chr2R 13256770 13256810 -7889898 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 686 203 171 0 0 chr2R 13257618 13257653 -7889055 + (CAAAC)n Simple_repeat Simple_repeat 2 36 0 2 686 203 158 0 0 chr2R 13258460 13258498 -7888210 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 686 207 139 0 0 chr2R 13258928 13258964 -7887744 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 2 686 186 118 0 0 chr2R 13259109 13259143 -7887565 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 686 214 171 0 0 chr2R 13260354 13260389 -7886319 + T-rich Low_complexity Low_complexity 1 35 0 2 686 22 0 0 0 chr2R 13260406 13260428 -7886280 + AT_rich Low_complexity Low_complexity 1 22 0 2 686 276 187 7 56 chr2R 13261516 13261658 -7885050 + (CAG)n Simple_repeat Simple_repeat 3 137 0 2 686 336 158 47 47 chr2R 13261703 13261809 -7884899 + ROO_I LTR Pao 640 745 -7511 2 686 204 179 0 0 chr2R 13263446 13263485 -7883223 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2 686 276 221 9 17 chr2R 13264196 13264311 -7882397 + (TA)n Simple_repeat Simple_repeat 2 115 0 2 686 22 35 0 0 chr2R 13265654 13265683 -7881025 + AT_rich Low_complexity Low_complexity 1 29 0 2 686 205 29 0 56 chr2R 13265747 13265783 -7880925 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 686 26 64 0 0 chr2R 13266228 13266275 -7880433 + AT_rich Low_complexity Low_complexity 1 47 0 2 686 35 24 0 0 chr2R 13266485 13266527 -7880181 + AT_rich Low_complexity Low_complexity 1 42 0 2 686 200 132 0 26 chr2R 13266530 13266569 -7880139 + (TTA)n Simple_repeat Simple_repeat 3 40 0 2 686 204 229 0 77 chr2R 13266785 13266889 -7879819 + A-rich Low_complexity Low_complexity 4 99 0 2 686 192 40 0 0 chr2R 13268501 13268526 -7878182 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 686 221 250 0 0 chr2R 13272465 13272513 -7874195 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 686 27 73 0 0 chr2R 13273124 13273179 -7873529 + AT_rich Low_complexity Low_complexity 1 55 0 2 686 273 151 0 0 chr2R 13273949 13274002 -7872706 + (CAGA)n Simple_repeat Simple_repeat 3 55 0 2 686 214 186 0 23 chr2R 13277048 13277092 -7869616 + (CAGTG)n Simple_repeat Simple_repeat 3 45 0 2 686 28 29 0 0 chr2R 13277953 13277988 -7868720 + AT_rich Low_complexity Low_complexity 1 35 0 2 686 180 0 0 0 chr2R 13285043 13285063 -7861645 + (CAG)n Simple_repeat Simple_repeat 1 20 0 2 686 183 42 0 0 chr2R 13289487 13289511 -7857197 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2 686 227 250 16 0 chr2R 13295934 13295998 -7850710 + CT-rich Low_complexity Low_complexity 3 67 0 2 686 26 30 0 0 chr2R 13300107 13300140 -7846568 + AT_rich Low_complexity Low_complexity 1 33 0 2 686 209 163 20 0 chr2R 13301976 13302025 -7844683 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 686 294 132 0 0 chr2R 13302109 13302162 -7844546 + (TTG)n Simple_repeat Simple_repeat 1 53 0 2 686 200 170 19 0 chr2R 13303114 13303167 -7843541 + (CTG)n Simple_repeat Simple_repeat 3 56 0 2 686 192 125 0 0 chr2R 13303179 13303211 -7843497 + (ATGGTG)n Simple_repeat Simple_repeat 4 35 0 2 686 265 164 68 0 chr2R 13309342 13309415 -7837293 + ROO_I LTR Pao 675 752 -7504 2 686 22 35 0 0 chr2R 13310992 13311021 -7835687 + AT_rich Low_complexity Low_complexity 1 29 0 2 686 24 85 0 0 chr2R 13315293 13315352 -7831356 + AT_rich Low_complexity Low_complexity 1 59 0 2 686 209 250 0 0 chr2R 13322041 13322093 -7824615 + (CTG)n Simple_repeat Simple_repeat 1 52 0 2 686 28 0 0 0 chr2R 13323766 13323794 -7822914 + AT_rich Low_complexity Low_complexity 1 28 0 2 686 21 71 0 0 chr2R 13327315 13327357 -7819351 + AT_rich Low_complexity Low_complexity 1 42 0 2 686 25 31 0 0 chr2R 13328399 13328431 -7818277 + AT_rich Low_complexity Low_complexity 1 32 0 2 686 207 167 0 0 chr2R 13330609 13330651 -7816057 + (TATG)n Simple_repeat Simple_repeat 4 45 0 2 686 21 57 0 0 chr2R 13331232 13331267 -7815441 + AT_rich Low_complexity Low_complexity 1 35 0 2 686 407 211 143 60 chr2R 13335672 13335854 -7810854 - DNAREP1_DM LINE Penelope -390 204 8 2 686 23 68 0 0 chr2R 13335928 13335972 -7810736 + AT_rich Low_complexity Low_complexity 1 44 0 2 686 684 202 64 48 chr2R 13339018 13339205 -7807503 - DNAREP1_DM LINE Penelope 0 594 405 2 686 669 110 15 30 chr2R 13339398 13339529 -7807179 - DNAREP1_DM LINE Penelope -274 320 192 2 686 28 48 0 0 chr2R 13340213 13340255 -7806453 + AT_rich Low_complexity Low_complexity 1 42 0 2 686 483 229 8 56 chr2R 13340527 13340652 -7806056 - DNAREP1_DM LINE Penelope -2 592 474 2 686 21 36 0 0 chr2R 13341368 13341396 -7805312 + AT_rich Low_complexity Low_complexity 1 28 0 2 686 31 0 0 0 chr2R 13344815 13344846 -7801862 + AT_rich Low_complexity Low_complexity 1 31 0 2 686 228 67 0 0 chr2R 13346254 13346284 -7800424 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 686 233 236 0 0 chr2R 13347188 13347243 -7799465 + T-rich Low_complexity Low_complexity 1 55 0 2 686 237 83 0 0 chr2R 13348207 13348243 -7798465 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 686 342 61 0 0 chr2R 13349670 13349719 -7796989 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 686 253 177 0 0 chr2R 13350514 13350576 -7796132 + ROO_I LTR Pao 665 726 -7530 2 686 216 243 0 0 chr2R 13350966 13351036 -7795672 + CT-rich Low_complexity Low_complexity 1 70 0 2 686 24 53 0 0 chr2R 13353220 13353258 -7793450 + AT_rich Low_complexity Low_complexity 1 38 0 2 686 21 0 0 0 chr2R 13353461 13353482 -7793226 + AT_rich Low_complexity Low_complexity 1 21 0 2 686 23 0 0 0 chr2R 13353650 13353673 -7793035 + AT_rich Low_complexity Low_complexity 1 23 0 2 686 222 37 0 0 chr2R 13353862 13353889 -7792819 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 686 267 140 0 0 chr2R 13357625 13357675 -7789033 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 686 27 87 0 0 chr2R 13362559 13362628 -7784080 + AT_rich Low_complexity Low_complexity 1 69 0 2 686 231 254 0 0 chr2R 13363365 13363432 -7783276 + (CTG)n Simple_repeat Simple_repeat 1 67 0 2 686 414 69 0 0 chr2R 13363833 13363891 -7782817 + (TC)n Simple_repeat Simple_repeat 2 59 0 2 686 24 0 0 0 chr2R 13367154 13367178 -7779530 + AT_rich Low_complexity Low_complexity 1 24 0 2 687 24 0 0 0 chr2R 13371275 13371299 -7775409 + AT_rich Low_complexity Low_complexity 1 24 0 2 687 252 0 0 0 chr2R 13371910 13371938 -7774770 + (A)n Simple_repeat Simple_repeat 1 28 0 2 687 213 132 0 26 chr2R 13372236 13372275 -7774433 + (CGTAA)n Simple_repeat Simple_repeat 4 41 0 2 687 22 35 0 0 chr2R 13372415 13372444 -7774264 + AT_rich Low_complexity Low_complexity 1 29 0 2 687 43295 1 0 0 chr2R 13373484 13378176 -7768532 + FW_DM LINE Jockey 1 4692 0 2 687 25 0 0 0 chr2R 13383559 13383584 -7763124 + AT_rich Low_complexity Low_complexity 1 25 0 2 687 25 31 0 0 chr2R 13385290 13385322 -7761386 + AT_rich Low_complexity Low_complexity 1 32 0 2 687 224 208 9 0 chr2R 13386299 13386405 -7760303 + (GGATG)n Simple_repeat Simple_repeat 4 110 0 2 687 201 74 0 0 chr2R 13387051 13387078 -7759630 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 687 207 339 0 17 chr2R 13387244 13387364 -7759344 + GA-rich Low_complexity Low_complexity 2 119 0 2 687 22 0 0 0 chr2R 13388351 13388373 -7758335 + AT_rich Low_complexity Low_complexity 1 22 0 2 687 189 121 0 0 chr2R 13389676 13389709 -7756999 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 687 207 69 0 0 chr2R 13392211 13392240 -7754468 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 687 210 128 0 0 chr2R 13394147 13394186 -7752522 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 687 208 186 23 0 chr2R 13394765 13394808 -7751900 + (TTG)n Simple_repeat Simple_repeat 3 46 0 2 687 213 39 0 0 chr2R 13396991 13397017 -7749691 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 687 23 0 0 0 chr2R 13397803 13397826 -7748882 + AT_rich Low_complexity Low_complexity 1 23 0 2 687 21 57 0 0 chr2R 13405762 13405797 -7740911 + AT_rich Low_complexity Low_complexity 1 35 0 2 687 186 191 0 0 chr2R 13412911 13412958 -7733750 + (CTG)n Simple_repeat Simple_repeat 1 47 0 2 687 286 224 0 0 chr2R 13416233 13416309 -7730399 - ROO_I LTR Pao -7542 714 639 2 687 26 50 0 0 chr2R 13416550 13416590 -7730118 + AT_rich Low_complexity Low_complexity 1 40 0 2 687 213 39 0 0 chr2R 13417321 13417347 -7729361 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 2 687 186 118 0 0 chr2R 13421872 13421906 -7724802 + (T)n Simple_repeat Simple_repeat 1 34 0 2 687 21 0 0 0 chr2R 13423788 13423809 -7722899 + AT_rich Low_complexity Low_complexity 1 21 0 2 687 205 200 0 0 chr2R 13431807 13431847 -7714861 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 687 224 222 0 0 chr2R 13435876 13435921 -7710787 + CT-rich Low_complexity Low_complexity 2 46 0 2 687 257 270 16 0 chr2R 13445549 13445612 -7701096 + (CGGA)n Simple_repeat Simple_repeat 3 66 0 2 687 242 56 0 27 chr2R 13468157 13468194 -7678514 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 2 687 243 138 72 36 chr2R 13468621 13468704 -7678004 + (TA)n Simple_repeat Simple_repeat 2 87 0 2 687 22 0 0 0 chr2R 13476330 13476352 -7670356 + AT_rich Low_complexity Low_complexity 1 22 0 2 687 186 133 0 0 chr2R 13477915 13477945 -7668763 + (CAA)n Simple_repeat Simple_repeat 2 31 0 2 687 200 325 0 0 chr2R 13481040 13481117 -7665591 + (CAA)n Simple_repeat Simple_repeat 3 79 0 2 687 232 243 0 39 chr2R 13481153 13481230 -7665478 + CT-rich Low_complexity Low_complexity 1 74 0 2 687 210 150 0 0 chr2R 13490971 13491011 -7655697 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 687 41 66 0 0 chr2R 13491436 13491512 -7655196 + AT_rich Low_complexity Low_complexity 1 76 0 2 687 21 0 0 0 chr2R 13492347 13492368 -7654340 + AT_rich Low_complexity Low_complexity 1 21 0 2 687 203 284 0 0 chr2R 13496555 13496629 -7650079 + CT-rich Low_complexity Low_complexity 2 75 0 2 688 29 0 0 0 chr2R 13502790 13502819 -7643889 + AT_rich Low_complexity Low_complexity 1 29 0 2 688 25 0 0 0 chr2R 13504015 13504040 -7642668 + AT_rich Low_complexity Low_complexity 1 25 0 2 688 180 135 0 0 chr2R 13514902 13514939 -7631769 + (TAAAAA)n Simple_repeat Simple_repeat 6 42 0 2 688 208 174 22 0 chr2R 13516246 13516292 -7630416 + A-rich Low_complexity Low_complexity 6 52 0 2 688 248 267 0 0 chr2R 13523335 13523395 -7623313 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 688 23 0 0 0 chr2R 13524099 13524122 -7622586 + AT_rich Low_complexity Low_complexity 1 23 0 2 688 33 0 0 0 chr2R 13527031 13527064 -7619644 + AT_rich Low_complexity Low_complexity 1 33 0 2 688 32 43 0 0 chr2R 13527309 13527355 -7619353 + AT_rich Low_complexity Low_complexity 1 46 0 2 688 201 161 0 0 chr2R 13531618 13531649 -7615059 + (TATG)n Simple_repeat Simple_repeat 4 34 0 2 688 204 40 0 0 chr2R 13533172 13533197 -7613511 + (A)n Simple_repeat Simple_repeat 1 25 0 2 688 21 0 0 0 chr2R 13537572 13537593 -7609115 + AT_rich Low_complexity Low_complexity 1 21 0 2 688 21 0 0 0 chr2R 13539093 13539114 -7607594 + AT_rich Low_complexity Low_complexity 1 21 0 2 688 22 0 0 0 chr2R 13540364 13540386 -7606322 + AT_rich Low_complexity Low_complexity 1 22 0 2 688 225 137 19 19 chr2R 13542901 13542953 -7603755 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 688 180 163 0 0 chr2R 13545445 13545488 -7601220 + A-rich Low_complexity Low_complexity 1 43 0 2 688 256 171 0 0 chr2R 13546100 13546141 -7600567 - DNAREP1_DM LINE Penelope -535 59 19 2 688 42 20 0 0 chr2R 13546912 13546961 -7599747 + AT_rich Low_complexity Low_complexity 1 49 0 2 688 207 170 0 0 chr2R 13547249 13547296 -7599412 + T-rich Low_complexity Low_complexity 1 47 0 2 688 21 0 0 0 chr2R 13550885 13550906 -7595802 + AT_rich Low_complexity Low_complexity 1 21 0 2 688 24 0 0 0 chr2R 13551485 13551509 -7595199 + AT_rich Low_complexity Low_complexity 1 24 0 2 688 22 0 0 0 chr2R 13560647 13560669 -7586039 + AT_rich Low_complexity Low_complexity 1 22 0 2 688 180 0 0 0 chr2R 13565497 13565517 -7581191 + (T)n Simple_repeat Simple_repeat 1 20 0 2 688 228 86 0 0 chr2R 13566004 13566039 -7580669 + (GCTG)n Simple_repeat Simple_repeat 3 37 0 2 688 243 0 0 0 chr2R 13566134 13566161 -7580547 + (CTG)n Simple_repeat Simple_repeat 2 28 0 2 688 203 120 0 107 chr2R 13566644 13566700 -7580008 + T-rich Low_complexity Low_complexity 2 51 0 2 688 41 87 0 0 chr2R 13567304 13567408 -7579300 + AT_rich Low_complexity Low_complexity 1 104 0 2 688 192 77 0 0 chr2R 13570477 13570503 -7576205 + (ACTCG)n Simple_repeat Simple_repeat 3 28 0 2 688 205 273 13 13 chr2R 13571280 13571358 -7575350 + (TG)n Simple_repeat Simple_repeat 2 79 0 2 688 24 32 0 0 chr2R 13571564 13571595 -7575113 + AT_rich Low_complexity Low_complexity 1 31 0 2 688 29 70 0 0 chr2R 13571728 13571785 -7574923 + AT_rich Low_complexity Low_complexity 1 57 0 2 688 23 0 0 0 chr2R 13577354 13577377 -7569331 + AT_rich Low_complexity Low_complexity 1 23 0 2 688 244 200 31 0 chr2R 13578416 13578481 -7568227 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 688 186 71 0 0 chr2R 13580660 13580688 -7566020 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 688 21 0 0 0 chr2R 13582602 13582623 -7564085 + AT_rich Low_complexity Low_complexity 1 21 0 2 688 192 125 0 0 chr2R 13583585 13583617 -7563091 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 688 26 50 0 0 chr2R 13585991 13586031 -7560677 + AT_rich Low_complexity Low_complexity 1 40 0 2 688 26 0 0 0 chr2R 13586306 13586332 -7560376 + AT_rich Low_complexity Low_complexity 1 26 0 2 688 22 35 0 0 chr2R 13587544 13587573 -7559135 + AT_rich Low_complexity Low_complexity 1 29 0 2 688 21 0 0 0 chr2R 13587861 13587882 -7558826 + AT_rich Low_complexity Low_complexity 1 21 0 2 688 21 0 0 0 chr2R 13588712 13588733 -7557975 + AT_rich Low_complexity Low_complexity 1 21 0 2 688 23 0 0 0 chr2R 13592746 13592769 -7553939 + AT_rich Low_complexity Low_complexity 1 23 0 2 688 35 24 0 0 chr2R 13597673 13597715 -7548993 + AT_rich Low_complexity Low_complexity 1 42 0 2 688 217 238 16 16 chr2R 13604815 13604879 -7541829 + CT-rich Low_complexity Low_complexity 2 65 0 2 688 25 51 0 0 chr2R 13606528 13606567 -7540141 + AT_rich Low_complexity Low_complexity 1 39 0 2 688 183 156 0 0 chr2R 13608113 13608145 -7538563 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 688 25 0 0 0 chr2R 13611202 13611227 -7535481 + AT_rich Low_complexity Low_complexity 1 25 0 2 688 372 94 0 0 chr2R 13616733 13616786 -7529922 + (CAGC)n Simple_repeat Simple_repeat 3 55 0 2 688 21 57 0 0 chr2R 13620667 13620702 -7526006 + AT_rich Low_complexity Low_complexity 1 35 0 2 688 183 100 0 0 chr2R 13623186 13623216 -7523492 + (TTCTCC)n Simple_repeat Simple_repeat 5 34 0 2 688 36 77 0 0 chr2R 13624816 13624894 -7521814 + AT_rich Low_complexity Low_complexity 1 78 0 2 688 26 50 0 0 chr2R 13625051 13625091 -7521617 + AT_rich Low_complexity Low_complexity 1 40 0 2 689 204 86 57 0 chr2R 13633640 13633675 -7513033 + (TTATA)n Simple_repeat Simple_repeat 4 40 0 2 689 26 0 0 0 chr2R 13636329 13636355 -7510353 + AT_rich Low_complexity Low_complexity 1 26 0 2 689 22 0 0 0 chr2R 13639223 13639245 -7507463 + AT_rich Low_complexity Low_complexity 1 22 0 2 689 26 30 0 0 chr2R 13645371 13645404 -7501304 + AT_rich Low_complexity Low_complexity 1 33 0 2 689 30 0 0 0 chr2R 13657767 13657797 -7488911 + AT_rich Low_complexity Low_complexity 1 30 0 2 689 258 56 0 0 chr2R 13662709 13662745 -7483963 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 689 4977 4 0 4 chr2R 13669920 13670469 -7476239 + POGO DNA Pogo 1 547 -1574 2 689 5434 2 2 2 chr2R 13670460 13671068 -7475640 + POGO DNA Pogo 1514 2121 0 2 689 22 35 0 0 chr2R 13671068 13671097 -7475611 + AT_rich Low_complexity Low_complexity 1 29 0 2 689 1685 5 0 0 chr2R 13671583 13671769 -7474939 - POGON1 DNA Pogo 0 186 1 2 689 276 30 0 0 chr2R 13672646 13672679 -7474029 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 689 206 306 12 12 chr2R 13677573 13677659 -7469049 + GA-rich Low_complexity Low_complexity 2 87 0 2 689 26 0 0 0 chr2R 13679926 13679952 -7466756 + AT_rich Low_complexity Low_complexity 1 26 0 2 689 203 133 0 0 chr2R 13681249 13681279 -7465429 + (CACG)n Simple_repeat Simple_repeat 1 30 0 2 689 215 146 18 0 chr2R 13681732 13681787 -7464921 + GA-rich Low_complexity Low_complexity 2 57 0 2 689 201 75 93 19 chr2R 13682317 13682371 -7464337 + (TATAA)n Simple_repeat Simple_repeat 4 61 0 2 689 210 105 0 0 chr2R 13682895 13682933 -7463775 + (CTG)n Simple_repeat Simple_repeat 1 38 0 2 689 210 200 57 0 chr2R 13683294 13683364 -7463344 + (TTTA)n Simple_repeat Simple_repeat 2 75 0 2 689 192 163 0 0 chr2R 13685633 13685676 -7461032 + A-rich Low_complexity Low_complexity 1 43 0 2 689 225 0 0 0 chr2R 13685941 13685966 -7460742 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 689 3597 5 7 7 chr2R 13685966 13686379 -7460329 - DM297_LTR LTR Gypsy -1 413 1 2 689 21 82 0 0 chr2R 13686860 13686909 -7459799 + AT_rich Low_complexity Low_complexity 1 49 0 2 689 25 31 0 0 chr2R 13688227 13688259 -7458449 + AT_rich Low_complexity Low_complexity 1 32 0 2 689 21 0 0 0 chr2R 13688812 13688833 -7457875 + AT_rich Low_complexity Low_complexity 1 21 0 2 689 209 176 0 0 chr2R 13689286 13689320 -7457388 + CT-rich Low_complexity Low_complexity 2 35 0 2 689 212 186 17 0 chr2R 13690043 13690102 -7456606 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 689 183 100 0 0 chr2R 13690599 13690629 -7456079 + (CAA)n Simple_repeat Simple_repeat 3 32 0 2 689 210 71 0 0 chr2R 13690681 13690709 -7455999 + (CAG)n Simple_repeat Simple_repeat 1 28 0 2 689 329 109 18 0 chr2R 13691569 13691624 -7455084 + (TTG)n Simple_repeat Simple_repeat 1 56 0 2 689 210 128 0 0 chr2R 13691985 13692024 -7454684 + (T)n Simple_repeat Simple_repeat 1 39 0 2 689 189 0 0 0 chr2R 13694143 13694164 -7452544 + (G)n Simple_repeat Simple_repeat 1 21 0 2 689 404 104 0 15 chr2R 13694424 13694492 -7452216 + (CAGTT)n Simple_repeat Simple_repeat 4 70 0 2 689 227 261 54 9 chr2R 13694873 13694985 -7451723 + (TTTG)n Simple_repeat Simple_repeat 1 117 0 2 689 21 71 0 0 chr2R 13695307 13695349 -7451359 + AT_rich Low_complexity Low_complexity 1 42 0 2 689 201 74 0 0 chr2R 13696389 13696416 -7450292 + (CAG)n Simple_repeat Simple_repeat 1 27 0 2 689 247 241 12 0 chr2R 13698784 13698867 -7447841 + ROO_I LTR Pao 643 726 -7530 2 689 21 0 0 0 chr2R 13700045 13700066 -7446642 + AT_rich Low_complexity Low_complexity 1 21 0 2 689 22 0 0 0 chr2R 13700253 13700275 -7446433 + AT_rich Low_complexity Low_complexity 1 22 0 2 689 24 0 0 0 chr2R 13701420 13701444 -7445264 + AT_rich Low_complexity Low_complexity 1 24 0 2 689 234 151 41 0 chr2R 13701691 13701764 -7444944 + (TTG)n Simple_repeat Simple_repeat 2 77 0 2 689 306 132 0 0 chr2R 13701892 13701945 -7444763 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 689 212 158 0 0 chr2R 13706557 13706595 -7440113 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 689 201 139 0 0 chr2R 13707427 13707470 -7439238 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2 689 189 147 0 0 chr2R 13707913 13707947 -7438761 + (T)n Simple_repeat Simple_repeat 1 34 0 2 689 282 56 0 0 chr2R 13708445 13708481 -7438227 + (TC)n Simple_repeat Simple_repeat 2 37 0 2 689 501 84 0 0 chr2R 13708652 13708723 -7437985 + (CAG)n Simple_repeat Simple_repeat 1 71 0 2 689 258 253 0 25 chr2R 13709685 13709766 -7436942 + (TTG)n Simple_repeat Simple_repeat 3 81 0 2 689 185 132 26 0 chr2R 13709846 13709884 -7436824 + (TCG)n Simple_repeat Simple_repeat 3 41 0 2 689 297 208 0 0 chr2R 13709905 13709977 -7436731 + (CAA)n Simple_repeat Simple_repeat 2 73 0 2 689 251 171 57 0 chr2R 13711401 13711489 -7435219 + ROO_I LTR Pao 641 733 -7523 2 689 180 0 0 0 chr2R 13714086 13714106 -7432602 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 689 186 43 0 0 chr2R 13714424 13714447 -7432261 + (CTGTG)n Simple_repeat Simple_repeat 3 25 0 2 689 23 68 0 0 chr2R 13714926 13714970 -7431738 + GC_rich Low_complexity Low_complexity 1 44 0 2 689 441 122 0 0 chr2R 13715289 13715363 -7431345 + (CAG)n Simple_repeat Simple_repeat 1 74 0 2 689 202 286 0 0 chr2R 13721563 13721619 -7425089 + (CATATA)n Simple_repeat Simple_repeat 6 61 0 2 689 209 246 0 19 chr2R 13721809 13721874 -7424834 + T-rich Low_complexity Low_complexity 1 63 0 2 689 28 29 0 0 chr2R 13722189 13722224 -7424484 + AT_rich Low_complexity Low_complexity 1 35 0 2 689 41 36 0 0 chr2R 13722823 13722878 -7423830 + AT_rich Low_complexity Low_complexity 1 55 0 2 689 222 91 0 0 chr2R 13723809 13723842 -7422866 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 689 183 100 0 0 chr2R 13725464 13725494 -7421214 + (CAG)n Simple_repeat Simple_repeat 1 30 0 2 689 207 100 0 0 chr2R 13725656 13725686 -7421022 + (CAG)n Simple_repeat Simple_repeat 3 32 0 2 689 219 36 0 0 chr2R 13725781 13725809 -7420899 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 689 189 74 0 0 chr2R 13725958 13725985 -7420723 + (T)n Simple_repeat Simple_repeat 1 27 0 2 689 246 62 0 0 chr2R 13727324 13727356 -7419352 + (CCAA)n Simple_repeat Simple_repeat 4 35 0 2 689 243 0 0 0 chr2R 13728747 13728774 -7417934 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 689 204 148 0 69 chr2R 13729915 13729973 -7416735 + (AGATG)n Simple_repeat Simple_repeat 5 58 0 2 689 207 114 0 0 chr2R 13734510 13734545 -7412163 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 689 198 0 0 0 chr2R 13736859 13736881 -7409827 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2 689 22 0 0 0 chr2R 13737711 13737733 -7408975 + AT_rich Low_complexity Low_complexity 1 22 0 2 689 202 243 34 51 chr2R 13738794 13738911 -7407797 + (CAG)n Simple_repeat Simple_repeat 1 115 0 2 689 22 35 0 0 chr2R 13740526 13740555 -7406153 + AT_rich Low_complexity Low_complexity 1 29 0 2 689 25 31 0 0 chr2R 13742428 13742460 -7404248 + AT_rich Low_complexity Low_complexity 1 32 0 2 689 22 0 0 0 chr2R 13743035 13743057 -7403651 + AT_rich Low_complexity Low_complexity 1 22 0 2 689 200 314 0 0 chr2R 13744991 13745061 -7401647 + (CAG)n Simple_repeat Simple_repeat 1 70 0 2 689 306 50 0 0 chr2R 13745970 13746010 -7400698 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 689 22 0 0 0 chr2R 13749029 13749051 -7397657 + AT_rich Low_complexity Low_complexity 1 22 0 2 689 22 88 0 0 chr2R 13757298 13757355 -7389353 + AT_rich Low_complexity Low_complexity 1 57 0 2 689 183 104 0 59 chr2R 13758057 13758108 -7388600 + (TATG)n Simple_repeat Simple_repeat 4 51 0 2 689 201 196 0 0 chr2R 13758311 13758362 -7388346 + (CAA)n Simple_repeat Simple_repeat 1 51 0 2 689 212 262 0 0 chr2R 13759027 13759088 -7387620 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 689 195 139 0 0 chr2R 13761553 13761589 -7385119 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 689 23 54 0 0 chr2R 13762232 13762269 -7384439 + AT_rich Low_complexity Low_complexity 1 37 0 2 690 252 0 0 0 chr2R 13770201 13770229 -7376479 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 690 37 23 0 0 chr2R 13770865 13770909 -7375799 + AT_rich Low_complexity Low_complexity 1 44 0 2 690 23 78 0 0 chr2R 13771543 13771594 -7375114 + AT_rich Low_complexity Low_complexity 1 51 0 2 690 23 0 0 0 chr2R 13775537 13775560 -7371148 + AT_rich Low_complexity Low_complexity 1 23 0 2 690 21 71 0 0 chr2R 13776993 13777035 -7369673 + AT_rich Low_complexity Low_complexity 1 42 0 2 690 29 0 0 0 chr2R 13777523 13777552 -7369156 + AT_rich Low_complexity Low_complexity 1 29 0 2 690 25 31 0 0 chr2R 13783139 13783171 -7363537 + AT_rich Low_complexity Low_complexity 1 32 0 2 690 204 40 0 0 chr2R 13783329 13783354 -7363354 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 690 218 184 0 0 chr2R 13784243 13784281 -7362427 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 690 40 0 0 0 chr2R 13786172 13786212 -7360496 + AT_rich Low_complexity Low_complexity 1 40 0 2 690 27 0 0 0 chr2R 13788886 13788913 -7357795 + AT_rich Low_complexity Low_complexity 1 27 0 2 690 21 0 0 0 chr2R 13790445 13790466 -7356242 + AT_rich Low_complexity Low_complexity 1 21 0 2 690 22 0 0 0 chr2R 13795610 13795632 -7351076 + AT_rich Low_complexity Low_complexity 1 22 0 2 690 36 40 0 0 chr2R 13799029 13799079 -7347629 + AT_rich Low_complexity Low_complexity 1 50 0 2 690 21 57 0 0 chr2R 13805132 13805167 -7341541 + AT_rich Low_complexity Low_complexity 1 35 0 2 690 27 0 0 0 chr2R 13808839 13808866 -7337842 + AT_rich Low_complexity Low_complexity 1 27 0 2 690 213 159 0 0 chr2R 13816661 13816705 -7330003 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 690 50 65 0 0 chr2R 13816873 13816965 -7329743 + AT_rich Low_complexity Low_complexity 1 92 0 2 690 37 39 0 0 chr2R 13816983 13817034 -7329674 + AT_rich Low_complexity Low_complexity 1 51 0 2 690 22 0 0 0 chr2R 13818015 13818037 -7328671 + AT_rich Low_complexity Low_complexity 1 22 0 2 690 189 0 0 0 chr2R 13819239 13819260 -7327448 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 690 26 0 0 0 chr2R 13819925 13819951 -7326757 + AT_rich Low_complexity Low_complexity 1 26 0 2 690 21 0 0 0 chr2R 13822209 13822230 -7324478 + AT_rich Low_complexity Low_complexity 1 21 0 2 690 33 66 0 0 chr2R 13823627 13823688 -7323020 + AT_rich Low_complexity Low_complexity 1 61 0 2 690 233 244 25 13 chr2R 13824257 13824336 -7322372 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 690 201 74 0 0 chr2R 13826259 13826286 -7320422 + (CTAGG)n Simple_repeat Simple_repeat 5 31 0 2 690 24 0 0 0 chr2R 13827696 13827720 -7318988 + AT_rich Low_complexity Low_complexity 1 24 0 2 690 25 0 0 0 chr2R 13829676 13829701 -7317007 + AT_rich Low_complexity Low_complexity 1 25 0 2 690 345 174 0 0 chr2R 13830666 13830735 -7315973 + (CAA)n Simple_repeat Simple_repeat 1 69 0 2 690 198 171 0 0 chr2R 13831379 13831420 -7315288 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 690 23 78 0 0 chr2R 13831851 13831902 -7314806 + AT_rich Low_complexity Low_complexity 1 51 0 2 690 200 139 28 0 chr2R 13832673 13832709 -7313999 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 690 24 0 0 0 chr2R 13832844 13832868 -7313840 + AT_rich Low_complexity Low_complexity 1 24 0 2 690 24 0 0 0 chr2R 13832900 13832924 -7313784 + GC_rich Low_complexity Low_complexity 1 24 0 2 690 22 0 0 0 chr2R 13833021 13833043 -7313665 + AT_rich Low_complexity Low_complexity 1 22 0 2 690 183 42 0 0 chr2R 13833730 13833754 -7312954 + (GGA)n Simple_repeat Simple_repeat 1 24 0 2 690 23 54 0 0 chr2R 13835100 13835137 -7311571 + AT_rich Low_complexity Low_complexity 1 37 0 2 690 21 0 0 0 chr2R 13839477 13839498 -7307210 + AT_rich Low_complexity Low_complexity 1 21 0 2 690 185 0 40 0 chr2R 13842623 13842648 -7304060 + (CAGTC)n Simple_repeat Simple_repeat 1 26 0 2 690 267 191 0 0 chr2R 13844327 13844390 -7302318 + (CAT)n Simple_repeat Simple_repeat 3 65 0 2 690 32 0 0 0 chr2R 13844842 13844874 -7301834 + AT_rich Low_complexity Low_complexity 1 32 0 2 690 26 30 0 0 chr2R 13845382 13845415 -7301293 + AT_rich Low_complexity Low_complexity 1 33 0 2 690 222 164 0 0 chr2R 13847139 13847194 -7299514 + (CAG)n Simple_repeat Simple_repeat 1 55 0 2 690 22 0 0 0 chr2R 13847680 13847702 -7299006 + AT_rich Low_complexity Low_complexity 1 22 0 2 690 27 0 0 0 chr2R 13849008 13849035 -7297673 + AT_rich Low_complexity Low_complexity 1 27 0 2 690 243 0 0 0 chr2R 13850213 13850240 -7296468 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 690 22 0 0 0 chr2R 13851787 13851809 -7294899 + AT_rich Low_complexity Low_complexity 1 22 0 2 690 200 86 29 0 chr2R 13852264 13852299 -7294409 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 690 26 0 0 0 chr2R 13855359 13855385 -7291323 + AT_rich Low_complexity Low_complexity 1 26 0 2 690 186 71 0 0 chr2R 13855949 13855977 -7290731 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 690 261 119 0 0 chr2R 13856012 13856054 -7290654 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 690 248 111 0 0 chr2R 13857408 13857444 -7289264 + DOC3_DM LINE Jockey 527 562 -4178 2 690 33 43 0 0 chr2R 13864866 13864913 -7281795 + AT_rich Low_complexity Low_complexity 1 47 0 2 690 180 97 0 0 chr2R 13868256 13868287 -7278421 + (CAG)n Simple_repeat Simple_repeat 3 33 0 2 690 252 0 0 0 chr2R 13868660 13868688 -7278020 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 690 26 30 0 0 chr2R 13872477 13872510 -7274198 + AT_rich Low_complexity Low_complexity 1 33 0 2 690 25 0 0 0 chr2R 13876961 13876986 -7269722 + AT_rich Low_complexity Low_complexity 1 25 0 2 690 555 102 0 0 chr2R 13879271 13879359 -7267349 + (CTG)n Simple_repeat Simple_repeat 2 89 0 2 690 28 61 0 0 chr2R 13882816 13882865 -7263843 + AT_rich Low_complexity Low_complexity 1 49 0 2 690 23 33 0 0 chr2R 13884303 13884333 -7262375 + AT_rich Low_complexity Low_complexity 1 30 0 2 690 246 32 0 0 chr2R 13889122 13889153 -7257555 + (AGTTG)n Simple_repeat Simple_repeat 1 31 0 2 690 248 172 17 0 chr2R 13890523 13890581 -7256127 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 690 258 106 0 0 chr2R 13890756 13890803 -7255905 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 690 321 100 0 0 chr2R 13891944 13891994 -7254714 + (AACTG)n Simple_repeat Simple_repeat 4 53 0 2 690 26 0 0 0 chr2R 13892633 13892659 -7254049 + AT_rich Low_complexity Low_complexity 1 26 0 2 690 206 215 0 44 chr2R 13892968 13893036 -7253672 + T-rich Low_complexity Low_complexity 6 70 0 2 86 38 89 0 0 chr2R 13893570 13893671 -7253037 + AT_rich Low_complexity Low_complexity 1 101 0 2 691 207 0 0 0 chr2R 13893973 13893996 -7252712 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 691 228 232 0 14 chr2R 13895421 13895491 -7251217 + ROO_I LTR Pao 645 713 -7543 2 691 21 0 0 0 chr2R 13896709 13896730 -7249978 + AT_rich Low_complexity Low_complexity 1 21 0 2 691 228 143 0 0 chr2R 13897486 13897528 -7249180 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 691 24 0 0 0 chr2R 13897729 13897753 -7248955 + AT_rich Low_complexity Low_complexity 1 24 0 2 691 203 130 0 42 chr2R 13897871 13897919 -7248789 + (TTTAA)n Simple_repeat Simple_repeat 3 48 0 2 691 231 149 0 21 chr2R 13898659 13898707 -7248001 + (TTTCG)n Simple_repeat Simple_repeat 3 49 0 2 691 205 162 0 0 chr2R 13911684 13911721 -7234987 + (CAG)n Simple_repeat Simple_repeat 1 37 0 2 691 21 0 0 0 chr2R 13912642 13912663 -7234045 + AT_rich Low_complexity Low_complexity 1 21 0 2 691 38 51 0 0 chr2R 13916037 13916096 -7230612 + AT_rich Low_complexity Low_complexity 1 59 0 2 691 213 65 0 0 chr2R 13916412 13916443 -7230265 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 691 23 33 0 0 chr2R 13919416 13919446 -7227262 + AT_rich Low_complexity Low_complexity 1 30 0 2 691 649 143 50 16 chr2R 13919851 13919972 -7226736 + HOBO DNA hAT 1 125 -2891 2 691 49 80 0 0 chr2R 13920007 13920119 -7226589 + AT_rich Low_complexity Low_complexity 1 112 0 2 691 234 0 0 0 chr2R 13920298 13920324 -7226384 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 691 22 35 0 0 chr2R 13920450 13920479 -7226229 + AT_rich Low_complexity Low_complexity 1 29 0 2 691 225 65 0 0 chr2R 13925670 13925701 -7221007 + (CAGC)n Simple_repeat Simple_repeat 3 33 0 2 691 230 231 0 0 chr2R 13928481 13928533 -7218175 + (CAG)n Simple_repeat Simple_repeat 2 53 0 2 691 28 29 0 0 chr2R 13930419 13930454 -7216254 + AT_rich Low_complexity Low_complexity 1 35 0 2 691 2153 0 0 40 chr2R 13933232 13933504 -7213204 + LINEJ1_DM LINE Jockey 4760 5020 0 2 691 21 0 0 0 chr2R 13933504 13933525 -7213183 + AT_rich Low_complexity Low_complexity 1 21 0 2 691 21 82 0 0 chr2R 13933756 13933805 -7212903 + AT_rich Low_complexity Low_complexity 1 49 0 2 691 195 224 0 0 chr2R 13943782 13943858 -7202850 + (TGG)n Simple_repeat Simple_repeat 2 77 0 2 691 45 62 0 0 chr2R 13945135 13945215 -7201493 + AT_rich Low_complexity Low_complexity 1 80 0 2 691 408 82 0 0 chr2R 13949563 13949624 -7197084 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 691 27 49 0 0 chr2R 13953515 13953556 -7193152 + AT_rich Low_complexity Low_complexity 1 41 0 2 691 21 36 0 0 chr2R 13954286 13954314 -7192394 + AT_rich Low_complexity Low_complexity 1 28 0 2 691 25 31 0 0 chr2R 13954341 13954373 -7192335 + AT_rich Low_complexity Low_complexity 1 32 0 2 691 22 56 0 0 chr2R 13954396 13954432 -7192276 + AT_rich Low_complexity Low_complexity 1 36 0 2 691 198 150 0 0 chr2R 13954815 13954855 -7191853 + (GTTTG)n Simple_repeat Simple_repeat 5 44 0 2 691 228 185 0 0 chr2R 13955640 13955694 -7191014 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 691 183 42 0 0 chr2R 13955792 13955816 -7190892 + (A)n Simple_repeat Simple_repeat 1 24 0 2 691 192 111 0 0 chr2R 13957206 13957242 -7189466 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 691 35 0 0 0 chr2R 13957681 13957716 -7188992 + AT_rich Low_complexity Low_complexity 1 35 0 2 691 28 29 0 0 chr2R 13960347 13960382 -7186326 + AT_rich Low_complexity Low_complexity 1 35 0 2 691 24 0 0 0 chr2R 13960506 13960530 -7186178 + AT_rich Low_complexity Low_complexity 1 24 0 2 691 22 35 0 0 chr2R 13962803 13962832 -7183876 + AT_rich Low_complexity Low_complexity 1 29 0 2 691 213 39 0 0 chr2R 13966233 13966259 -7180449 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 691 1158 143 62 0 chr2R 13966898 13967107 -7179601 + STALKER4_LTR LTR Gypsy 152 373 -29 2 691 1269 300 29 29 chr2R 13967161 13967686 -7179022 - GTWIN_I LTR Gypsy -5412 1009 485 2 691 22 35 0 0 chr2R 13968082 13968111 -7178597 + AT_rich Low_complexity Low_complexity 1 29 0 2 691 620 168 39 16 chr2R 13968446 13968573 -7178135 + HOBO DNA hAT 1 130 -2886 2 691 2138 102 170 2 chr2R 13968574 13968993 -7177715 + HOBO DNA hAT 636 1124 -1892 2 691 1778 157 63 8 chr2R 13969016 13969396 -7177312 + HOBO DNA hAT 1979 2379 -637 2 691 33 25 0 0 chr2R 13969422 13969462 -7177246 + AT_rich Low_complexity Low_complexity 1 40 0 2 691 47 44 0 0 chr2R 13970504 13970572 -7176136 + AT_rich Low_complexity Low_complexity 1 68 0 2 691 27 62 0 0 chr2R 13971438 13971486 -7175222 + AT_rich Low_complexity Low_complexity 1 48 0 2 691 249 175 17 17 chr2R 13974015 13974073 -7172635 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 691 231 61 0 0 chr2R 13976253 13976286 -7170422 + (ATAGG)n Simple_repeat Simple_repeat 3 35 0 2 691 229 296 25 0 chr2R 13977671 13977752 -7168956 + (CAA)n Simple_repeat Simple_repeat 3 85 0 2 691 246 88 0 130 chr2R 13977784 13977876 -7168832 + ROO_I LTR Pao 650 729 -7527 2 691 226 187 92 13 chr2R 13977808 13977884 -7168824 + TART_B1 LINE telomeric 122 203 -10451 2 691 240 245 43 0 chr2R 13978003 13978097 -7168611 + ROO_I LTR Pao 647 744 -7512 2 691 26 74 0 0 chr2R 13979785 13979839 -7166869 + AT_rich Low_complexity Low_complexity 1 54 0 2 691 245 206 0 61 chr2R 13989153 13989251 -7157457 - ROO_I LTR Pao -7534 722 631 2 691 337 303 11 11 chr2R 13989251 13989428 -7157280 + (CTG)n Simple_repeat Simple_repeat 3 179 0 2 691 212 231 0 71 chr2R 13989741 13989839 -7156869 + (CTG)n Simple_repeat Simple_repeat 3 93 0 2 691 221 139 47 0 chr2R 13995692 13995735 -7150973 + T-rich Low_complexity Low_complexity 3 47 0 2 691 203 186 0 23 chr2R 13995943 13995987 -7150721 + (CAG)n Simple_repeat Simple_repeat 1 43 0 2 691 203 167 0 0 chr2R 13996088 13996130 -7150578 + (ATG)n Simple_repeat Simple_repeat 1 42 0 2 691 23 33 0 0 chr2R 13996398 13996428 -7150280 + AT_rich Low_complexity Low_complexity 1 30 0 2 691 27 0 0 0 chr2R 13998082 13998109 -7148599 + AT_rich Low_complexity Low_complexity 1 27 0 2 691 21 0 0 0 chr2R 13998731 13998752 -7147956 + AT_rich Low_complexity Low_complexity 1 21 0 2 691 6968 1 0 0 chr2R 13999242 14000000 -7146708 + FW_DM LINE Jockey 890 1647 -3045 2 691 28040 1 0 0 chr2R 14000000 14003045 -7143663 + FW_DM LINE Jockey 1648 4692 0 2 691 22 0 0 0 chr2R 14005131 14005153 -7141555 + AT_rich Low_complexity Low_complexity 1 22 0 2 691 229 255 0 0 chr2R 14009928 14009975 -7136733 + (CTG)n Simple_repeat Simple_repeat 3 49 0 2 691 278 300 11 23 chr2R 14010168 14010342 -7136366 + (CTG)n Simple_repeat Simple_repeat 1 172 0 2 691 285 210 0 0 chr2R 14012605 14012667 -7134041 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 691 201 129 0 0 chr2R 14012960 14012991 -7133717 + (TTCCG)n Simple_repeat Simple_repeat 5 35 0 2 691 28 48 0 0 chr2R 14013593 14013635 -7133073 + AT_rich Low_complexity Low_complexity 1 42 0 2 691 214 245 0 0 chr2R 14021691 14021744 -7124964 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 691 25 65 0 0 chr2R 14022564 14022610 -7124098 + AT_rich Low_complexity Low_complexity 1 46 0 2 691 23 33 0 0 chr2R 14022774 14022804 -7123904 + AT_rich Low_complexity Low_complexity 1 30 0 2 691 225 196 0 0 chr2R 14024395 14024451 -7122257 + (CCA)n Simple_repeat Simple_repeat 1 56 0 2 692 233 268 0 0 chr2R 14028360 14028442 -7118266 + A-rich Low_complexity Low_complexity 1 82 0 2 692 279 266 18 35 chr2R 14033478 14033591 -7113117 + A-rich Low_complexity Low_complexity 5 115 0 2 692 23 0 0 0 chr2R 14033740 14033763 -7112945 + AT_rich Low_complexity Low_complexity 1 23 0 2 692 21 0 0 0 chr2R 14036125 14036146 -7110562 + AT_rich Low_complexity Low_complexity 1 21 0 2 692 203 188 21 0 chr2R 14041606 14041654 -7105054 + T-rich Low_complexity Low_complexity 4 52 0 2 692 25 31 0 0 chr2R 14042098 14042130 -7104578 + AT_rich Low_complexity Low_complexity 1 32 0 2 692 255 103 0 0 chr2R 14042163 14042202 -7104506 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 692 189 147 0 0 chr2R 14044819 14044853 -7101855 + (TGAG)n Simple_repeat Simple_repeat 2 35 0 2 692 198 0 0 0 chr2R 14044868 14044890 -7101818 + (CAA)n Simple_repeat Simple_repeat 1 22 0 2 692 25 0 0 0 chr2R 14045817 14045842 -7100866 + AT_rich Low_complexity Low_complexity 1 25 0 2 692 28 86 0 0 chr2R 14047666 14047736 -7098972 + AT_rich Low_complexity Low_complexity 1 70 0 2 692 26 50 0 0 chr2R 14047809 14047849 -7098859 + AT_rich Low_complexity Low_complexity 1 40 0 2 692 210 163 23 0 chr2R 14050560 14050603 -7096105 + (CCA)n Simple_repeat Simple_repeat 3 46 0 2 692 184 159 0 73 chr2R 14050603 14050671 -7096037 + (CAG)n Simple_repeat Simple_repeat 1 63 0 2 692 201 200 27 54 chr2R 14051682 14051756 -7094952 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 692 22 0 0 0 chr2R 14060135 14060157 -7086551 + AT_rich Low_complexity Low_complexity 1 22 0 2 692 234 229 0 0 chr2R 14064091 14064176 -7082532 + (CTG)n Simple_repeat Simple_repeat 1 85 0 2 692 21 36 0 0 chr2R 14064706 14064734 -7081974 + AT_rich Low_complexity Low_complexity 1 28 0 2 692 23 68 0 0 chr2R 14064920 14064964 -7081744 + AT_rich Low_complexity Low_complexity 1 44 0 2 692 278 292 0 0 chr2R 14067242 14067314 -7079394 + (CTG)n Simple_repeat Simple_repeat 1 72 0 2 692 221 175 0 0 chr2R 14071581 14071621 -7075087 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 692 246 143 0 0 chr2R 14077450 14077499 -7069209 + (TTCTCC)n Simple_repeat Simple_repeat 1 49 0 2 692 22 0 0 0 chr2R 14078240 14078262 -7068446 + AT_rich Low_complexity Low_complexity 1 22 0 2 692 22 35 0 0 chr2R 14080006 14080035 -7066673 + AT_rich Low_complexity Low_complexity 1 29 0 2 692 23 78 0 0 chr2R 14080638 14080689 -7066019 + AT_rich Low_complexity Low_complexity 1 51 0 2 692 39 38 0 0 chr2R 14083874 14083927 -7062781 + AT_rich Low_complexity Low_complexity 1 53 0 2 692 21 36 0 0 chr2R 14085438 14085466 -7061242 + AT_rich Low_complexity Low_complexity 1 28 0 2 692 22 35 0 0 chr2R 14085893 14085922 -7060786 + AT_rich Low_complexity Low_complexity 1 29 0 2 692 213 94 0 0 chr2R 14086278 14086310 -7060398 + (GCTG)n Simple_repeat Simple_repeat 1 32 0 2 692 21 0 0 0 chr2R 14086513 14086534 -7060174 + AT_rich Low_complexity Low_complexity 1 21 0 2 692 234 81 0 0 chr2R 14086809 14086846 -7059862 + (A)n Simple_repeat Simple_repeat 1 37 0 2 692 228 35 0 0 chr2R 14093137 14093166 -7053542 + (CGG)n Simple_repeat Simple_repeat 1 29 0 2 692 252 59 0 0 chr2R 14094520 14094554 -7052154 + (GTATG)n Simple_repeat Simple_repeat 2 35 0 2 692 26 50 0 0 chr2R 14095157 14095197 -7051511 + AT_rich Low_complexity Low_complexity 1 40 0 2 692 189 74 0 0 chr2R 14095444 14095471 -7051237 + (CAG)n Simple_repeat Simple_repeat 2 28 0 2 692 22 0 0 0 chr2R 14098012 14098034 -7048674 + AT_rich Low_complexity Low_complexity 1 22 0 2 692 180 77 0 0 chr2R 14100110 14100136 -7046572 + (GAGTG)n Simple_repeat Simple_repeat 2 27 0 2 692 21 36 0 0 chr2R 14102479 14102507 -7044201 + AT_rich Low_complexity Low_complexity 1 28 0 2 692 255 103 0 0 chr2R 14103422 14103461 -7043247 + (TCC)n Simple_repeat Simple_repeat 1 39 0 2 692 24 0 0 0 chr2R 14106779 14106803 -7039905 + AT_rich Low_complexity Low_complexity 1 24 0 2 692 21 0 0 0 chr2R 14108333 14108354 -7038354 + AT_rich Low_complexity Low_complexity 1 21 0 2 692 213 121 0 0 chr2R 14110813 14110846 -7035862 + (CAA)n Simple_repeat Simple_repeat 3 35 0 2 692 180 125 0 0 chr2R 14113066 14113098 -7033610 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 2 692 31 26 0 0 chr2R 14113891 14113929 -7032779 + AT_rich Low_complexity Low_complexity 1 38 0 2 692 26 0 0 0 chr2R 14116136 14116162 -7030546 + AT_rich Low_complexity Low_complexity 1 26 0 2 692 258 116 0 0 chr2R 14117348 14117391 -7029317 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 692 287 109 55 0 chr2R 14125940 14125995 -7020713 + (GTATG)n Simple_repeat Simple_repeat 2 59 0 2 692 252 59 0 0 chr2R 14127261 14127295 -7019413 + (CCTG)n Simple_repeat Simple_repeat 2 35 0 2 692 25 0 0 0 chr2R 14127726 14127751 -7018957 + AT_rich Low_complexity Low_complexity 1 25 0 2 692 209 119 0 23 chr2R 14131329 14131372 -7015336 + (CAG)n Simple_repeat Simple_repeat 3 44 0 2 692 24 0 0 0 chr2R 14131568 14131592 -7015116 + AT_rich Low_complexity Low_complexity 1 24 0 2 692 261 0 0 0 chr2R 14132205 14132234 -7014474 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 692 27 29 0 0 chr2R 14133068 14133102 -7013606 + AT_rich Low_complexity Low_complexity 1 34 0 2 692 277 191 0 0 chr2R 14134093 14134161 -7012547 - ROO_I LTR Pao -7522 734 667 2 692 271 95 0 60 chr2R 14134814 14134881 -7011827 + (TCCA)n Simple_repeat Simple_repeat 2 64 0 2 692 23 0 0 0 chr2R 14136865 14136888 -7009820 + AT_rich Low_complexity Low_complexity 1 23 0 2 692 218 143 0 67 chr2R 14140139 14140199 -7006509 + (TTG)n Simple_repeat Simple_repeat 2 57 0 2 692 219 235 0 0 chr2R 14141108 14141159 -7005549 + (CTG)n Simple_repeat Simple_repeat 1 51 0 2 692 21 0 0 0 chr2R 14144577 14144598 -7002110 + AT_rich Low_complexity Low_complexity 1 21 0 2 692 180 0 0 0 chr2R 14145170 14145190 -7001518 + (CAT)n Simple_repeat Simple_repeat 1 20 0 2 692 22 35 0 0 chr2R 14147513 14147542 -6999166 + AT_rich Low_complexity Low_complexity 1 29 0 2 692 246 136 0 0 chr2R 14149876 14149920 -6996788 + (TGGA)n Simple_repeat Simple_repeat 4 47 0 2 692 198 0 0 0 chr2R 14150023 14150045 -6996663 + (TTCTG)n Simple_repeat Simple_repeat 3 24 0 2 692 21 36 0 0 chr2R 14150248 14150276 -6996432 + AT_rich Low_complexity Low_complexity 1 28 0 2 692 231 152 0 0 chr2R 14151621 14151667 -6995041 + A-rich Low_complexity Low_complexity 1 46 0 2 692 23 78 0 0 chr2R 14152555 14152606 -6994102 + AT_rich Low_complexity Low_complexity 1 51 0 2 692 201 139 0 0 chr2R 14152977 14153020 -6993688 + (ATGGTG)n Simple_repeat Simple_repeat 6 48 0 2 692 207 171 0 0 chr2R 14155150 14155185 -6991523 + (CTG)n Simple_repeat Simple_repeat 1 35 0 2 692 219 88 0 0 chr2R 14155491 14155525 -6991183 + (CTG)n Simple_repeat Simple_repeat 3 36 0 2 692 231 187 0 51 chr2R 14155636 14155715 -6990993 - ROO_I LTR Pao -7541 715 641 2 693 237 225 12 36 chr2R 14159121 14159204 -6987504 - ROO_I LTR Pao -7522 734 654 2 693 230 123 66 40 chr2R 14161624 14161700 -6985008 + ROO_I LTR Pao 652 729 -7527 2 693 230 224 0 0 chr2R 14162121 14162179 -6984529 + (CTG)n Simple_repeat Simple_repeat 2 59 0 2 693 23 0 0 0 chr2R 14166792 14166815 -6979893 + AT_rich Low_complexity Low_complexity 1 23 0 2 693 219 295 0 10 chr2R 14167151 14167247 -6979461 + (TA)n Simple_repeat Simple_repeat 1 95 0 2 693 370 184 17 26 chr2R 14168678 14168795 -6977913 - ROO_I LTR Pao -7500 756 641 2 693 227 167 11 114 chr2R 14168795 14168883 -6977825 - ROO_I LTR Pao -7535 721 643 2 693 209 256 12 12 chr2R 14169241 14169324 -6977384 + (CTG)n Simple_repeat Simple_repeat 1 83 0 2 693 207 0 0 0 chr2R 14170969 14170992 -6975716 + (CTG)n Simple_repeat Simple_repeat 1 23 0 2 693 22 0 0 0 chr2R 14172593 14172615 -6974093 + AT_rich Low_complexity Low_complexity 1 22 0 2 693 219 250 0 0 chr2R 14174321 14174389 -6972319 + (CTG)n Simple_repeat Simple_repeat 3 70 0 2 693 39 74 0 0 chr2R 14175374 14175455 -6971253 + AT_rich Low_complexity Low_complexity 1 81 0 2 693 204 200 0 0 chr2R 14175755 14175800 -6970908 + (TTG)n Simple_repeat Simple_repeat 3 47 0 2 693 180 111 0 0 chr2R 14178913 14178940 -6967768 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2 693 208 147 0 0 chr2R 14179161 14179195 -6967513 + (ACTG)n Simple_repeat Simple_repeat 3 36 0 2 693 24 53 0 0 chr2R 14179501 14179539 -6967169 + AT_rich Low_complexity Low_complexity 1 38 0 2 693 22 0 0 0 chr2R 14180542 14180564 -6966144 + AT_rich Low_complexity Low_complexity 1 22 0 2 693 285 75 0 0 chr2R 14180590 14180630 -6966078 + (CAACT)n Simple_repeat Simple_repeat 4 43 0 2 693 21 0 0 0 chr2R 14183555 14183576 -6963132 + AT_rich Low_complexity Low_complexity 1 21 0 2 693 21 0 0 0 chr2R 14186378 14186399 -6960309 + AT_rich Low_complexity Low_complexity 1 21 0 2 693 47 33 0 0 chr2R 14186465 14186526 -6960182 + AT_rich Low_complexity Low_complexity 1 61 0 2 693 22 35 0 0 chr2R 14186935 14186964 -6959744 + AT_rich Low_complexity Low_complexity 1 29 0 2 693 219 192 0 40 chr2R 14188883 14188959 -6957749 + (TTG)n Simple_repeat Simple_repeat 1 73 0 2 693 186 133 0 0 chr2R 14190204 14190234 -6956474 + (CTG)n Simple_repeat Simple_repeat 3 32 0 2 693 222 37 0 0 chr2R 14194561 14194588 -6952120 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 693 210 283 0 70 chr2R 14194695 14194809 -6951899 + (TTG)n Simple_repeat Simple_repeat 3 108 0 2 693 207 200 0 0 chr2R 14195548 14195593 -6951115 + A-rich Low_complexity Low_complexity 1 45 0 2 693 27 29 0 0 chr2R 14196510 14196544 -6950164 + AT_rich Low_complexity Low_complexity 1 34 0 2 693 189 121 0 0 chr2R 14196842 14196875 -6949833 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 693 180 158 0 0 chr2R 14197302 14197340 -6949368 + (CTCG)n Simple_repeat Simple_repeat 2 39 0 2 693 258 32 0 0 chr2R 14198502 14198533 -6948175 + (CAT)n Simple_repeat Simple_repeat 3 33 0 2 693 242 217 0 32 chr2R 14198710 14198772 -6947936 + (CTG)n Simple_repeat Simple_repeat 3 62 0 2 693 294 29 0 0 chr2R 14199076 14199111 -6947597 + (CAG)n Simple_repeat Simple_repeat 3 37 0 2 693 201 74 0 0 chr2R 14199338 14199365 -6947343 + (CAG)n Simple_repeat Simple_repeat 3 29 0 2 693 435 92 0 0 chr2R 14199396 14199461 -6947247 + (CAG)n Simple_repeat Simple_repeat 2 66 0 2 693 300 70 0 0 chr2R 14199758 14199801 -6946907 + (CAG)n Simple_repeat Simple_repeat 1 43 0 2 693 223 254 0 0 chr2R 14199919 14199982 -6946726 + A-rich Low_complexity Low_complexity 2 64 0 2 693 217 253 25 0 chr2R 14200703 14200782 -6945926 + A-rich Low_complexity Low_complexity 2 82 0 2 693 240 100 0 0 chr2R 14204003 14204043 -6942665 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 693 224 236 0 0 chr2R 14207124 14207179 -6939529 + T-rich Low_complexity Low_complexity 1 55 0 2 693 27 49 0 0 chr2R 14207637 14207678 -6939030 + AT_rich Low_complexity Low_complexity 1 41 0 2 693 223 319 0 0 chr2R 14208673 14208742 -6937966 + (CAT)n Simple_repeat Simple_repeat 1 69 0 2 693 189 107 0 0 chr2R 14210983 14211011 -6935697 + (CATA)n Simple_repeat Simple_repeat 2 29 0 2 693 228 67 0 0 chr2R 14211135 14211165 -6935543 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 693 192 167 0 0 chr2R 14211648 14211696 -6935012 + (GTGTG)n Simple_repeat Simple_repeat 4 51 0 2 693 29 28 0 0 chr2R 14213620 14213656 -6933052 + AT_rich Low_complexity Low_complexity 1 36 0 2 693 23 0 0 0 chr2R 14213678 14213701 -6933007 + AT_rich Low_complexity Low_complexity 1 23 0 2 693 28 0 0 0 chr2R 14213792 14213820 -6932888 + AT_rich Low_complexity Low_complexity 1 28 0 2 693 208 53 53 0 chr2R 14213850 14213888 -6932820 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 693 26 0 0 0 chr2R 14214651 14214677 -6932031 + AT_rich Low_complexity Low_complexity 1 26 0 2 693 180 0 0 0 chr2R 14215352 14215372 -6931336 + (TTTTTA)n Simple_repeat Simple_repeat 4 23 0 2 693 207 0 0 0 chr2R 14217251 14217274 -6929434 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 2 693 231 103 0 0 chr2R 14217514 14217553 -6929155 + (CACTC)n Simple_repeat Simple_repeat 1 39 0 2 693 237 132 0 0 chr2R 14217710 14217748 -6928960 + (CGAGT)n Simple_repeat Simple_repeat 3 40 0 2 693 200 231 0 0 chr2R 14218681 14218720 -6927988 + (TTG)n Simple_repeat Simple_repeat 2 40 0 2 693 186 193 0 0 chr2R 14218840 14218897 -6927811 + A-rich Low_complexity Low_complexity 1 57 0 2 693 21 0 0 0 chr2R 14219629 14219650 -6927058 + AT_rich Low_complexity Low_complexity 1 21 0 2 693 27 29 0 0 chr2R 14220906 14220940 -6925768 + AT_rich Low_complexity Low_complexity 1 34 0 2 693 254 87 22 0 chr2R 14221126 14221172 -6925536 + (TTTCG)n Simple_repeat Simple_repeat 2 48 0 2 693 258 286 12 0 chr2R 14221309 14221393 -6925315 + (TG)n Simple_repeat Simple_repeat 1 85 0 2 693 22 70 0 0 chr2R 14223858 14223901 -6922807 + AT_rich Low_complexity Low_complexity 1 43 0 2 693 23 0 0 0 chr2R 14224018 14224041 -6922667 + AT_rich Low_complexity Low_complexity 1 23 0 2 693 189 121 0 0 chr2R 14224510 14224543 -6922165 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 2 693 21 0 0 0 chr2R 14225546 14225567 -6921141 + AT_rich Low_complexity Low_complexity 1 21 0 2 693 26 0 0 0 chr2R 14225909 14225935 -6920773 + AT_rich Low_complexity Low_complexity 1 26 0 2 693 189 121 0 0 chr2R 14226554 14226587 -6920121 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 2 693 207 114 0 0 chr2R 14226805 14226840 -6919868 + (CAA)n Simple_repeat Simple_repeat 1 35 0 2 693 30 27 0 0 chr2R 14230128 14230165 -6916543 + AT_rich Low_complexity Low_complexity 1 37 0 2 693 432 37 0 0 chr2R 14230991 14231045 -6915663 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 693 21 0 0 0 chr2R 14232920 14232941 -6913767 + AT_rich Low_complexity Low_complexity 1 21 0 2 693 210 128 0 0 chr2R 14233620 14233659 -6913049 + (CACTC)n Simple_repeat Simple_repeat 3 41 0 2 693 274 267 0 0 chr2R 14234305 14234380 -6912328 + A-rich Low_complexity Low_complexity 1 75 0 2 693 230 234 0 0 chr2R 14235061 14235125 -6911583 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 2 693 185 0 40 0 chr2R 14235308 14235333 -6911375 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 2 693 25 0 0 0 chr2R 14235742 14235767 -6910941 + AT_rich Low_complexity Low_complexity 1 25 0 2 693 204 235 23 23 chr2R 14236949 14237036 -6909672 + A-rich Low_complexity Low_complexity 2 88 0 2 693 210 231 0 30 chr2R 14237110 14237177 -6909531 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 2 693 210 179 0 0 chr2R 14237769 14237825 -6908883 + A-rich Low_complexity Low_complexity 1 56 0 2 693 21 0 0 0 chr2R 14238702 14238723 -6907985 + AT_rich Low_complexity Low_complexity 1 21 0 2 693 30 0 0 0 chr2R 14240245 14240275 -6906433 + AT_rich Low_complexity Low_complexity 1 30 0 2 693 236 30 0 29 chr2R 14240400 14240434 -6906274 + (AACTG)n Simple_repeat Simple_repeat 4 36 0 2 693 243 263 0 0 chr2R 14240474 14240531 -6906177 + (CAGA)n Simple_repeat Simple_repeat 3 59 0 2 693 21 36 0 0 chr2R 14242064 14242092 -6904616 + AT_rich Low_complexity Low_complexity 1 28 0 2 693 203 152 0 0 chr2R 14242250 14242283 -6904425 + C-rich Low_complexity Low_complexity 3 35 0 2 693 209 204 0 0 chr2R 14242553 14242602 -6904106 + A-rich Low_complexity Low_complexity 1 49 0 2 693 204 288 0 0 chr2R 14244175 14244234 -6902474 + T-rich Low_complexity Low_complexity 2 60 0 2 693 183 184 0 0 chr2R 14245725 14245763 -6900945 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 693 32163 2 0 1 chr2R 14245968 14249642 -6897066 - LINEJ1_DM LINE Jockey 0 5020 1350 2 693 3766 0 0 0 chr2R 14249642 14250070 -6896638 - ROO_LTR LTR Pao 0 428 1 2 693 70462 0 0 0 chr2R 14250070 14258326 -6888382 - ROO_I LTR Pao 0 8256 1 2 693 3766 0 0 0 chr2R 14258326 14258754 -6887954 - ROO_LTR LTR Pao 0 428 1 2 693 11647 8 1 0 chr2R 14258754 14260095 -6886613 - LINEJ1_DM LINE Jockey -3666 1354 13 2 693 205 182 0 0 chr2R 14261187 14261220 -6885488 + (TATG)n Simple_repeat Simple_repeat 4 36 0 2 693 200 280 0 20 chr2R 14261867 14261918 -6884790 + CT-rich Low_complexity Low_complexity 2 51 0 2 693 23 33 0 0 chr2R 14262101 14262131 -6884577 + AT_rich Low_complexity Low_complexity 1 30 0 2 693 268 171 0 50 chr2R 14262539 14262619 -6884089 + (CCCA)n Simple_repeat Simple_repeat 1 76 0 2 693 219 36 0 0 chr2R 14262799 14262827 -6883881 + (TCC)n Simple_repeat Simple_repeat 1 28 0 2 693 363 78 0 0 chr2R 14265037 14265088 -6881620 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 693 32 26 0 0 chr2R 14265836 14265875 -6880833 + AT_rich Low_complexity Low_complexity 1 39 0 2 693 22 35 0 0 chr2R 14270051 14270080 -6876628 + AT_rich Low_complexity Low_complexity 1 29 0 2 693 28 0 0 0 chr2R 14271157 14271185 -6875523 + AT_rich Low_complexity Low_complexity 1 28 0 2 693 49 18 0 0 chr2R 14271244 14271300 -6875408 + AT_rich Low_complexity Low_complexity 1 56 0 2 693 24 0 0 0 chr2R 14271626 14271650 -6875058 + AT_rich Low_complexity Low_complexity 1 24 0 2 693 22 56 0 0 chr2R 14275767 14275803 -6870905 + AT_rich Low_complexity Low_complexity 1 36 0 2 693 26 30 0 0 chr2R 14276485 14276518 -6870190 + AT_rich Low_complexity Low_complexity 1 33 0 2 693 29 47 0 0 chr2R 14276669 14276712 -6869996 + AT_rich Low_complexity Low_complexity 1 43 0 2 693 204 40 0 0 chr2R 14279075 14279100 -6867608 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2 693 21 36 0 0 chr2R 14279584 14279612 -6867096 + AT_rich Low_complexity Low_complexity 1 28 0 2 693 21 0 0 0 chr2R 14279781 14279802 -6866906 + AT_rich Low_complexity Low_complexity 1 21 0 2 693 24 0 0 0 chr2R 14282896 14282920 -6863788 + AT_rich Low_complexity Low_complexity 1 24 0 2 693 26 50 0 0 chr2R 14285352 14285392 -6861316 + AT_rich Low_complexity Low_complexity 1 40 0 2 693 210 100 19 57 chr2R 14286727 14286780 -6859928 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 2 694 249 179 0 51 chr2R 14287404 14287463 -6859245 + Gypsy_DS LTR Gypsy 6816 6871 -651 2 694 28 0 0 0 chr2R 14290586 14290614 -6856094 + AT_rich Low_complexity Low_complexity 1 28 0 2 694 24 91 0 0 chr2R 14296029 14296095 -6850613 + AT_rich Low_complexity Low_complexity 1 66 0 2 694 25 0 0 0 chr2R 14298037 14298062 -6848646 + AT_rich Low_complexity Low_complexity 1 25 0 2 694 30 69 0 0 chr2R 14299336 14299394 -6847314 + AT_rich Low_complexity Low_complexity 1 58 0 2 694 220 213 0 0 chr2R 14300191 14300238 -6846470 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 694 205 250 0 0 chr2R 14307226 14307282 -6839426 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 694 207 0 0 0 chr2R 14309681 14309704 -6837004 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 694 21 0 0 0 chr2R 14310189 14310210 -6836498 + AT_rich Low_complexity Low_complexity 1 21 0 2 694 221 83 28 0 chr2R 14312653 14312689 -6834019 + (CTAA)n Simple_repeat Simple_repeat 1 37 0 2 694 228 86 0 0 chr2R 14321565 14321600 -6825108 + (A)n Simple_repeat Simple_repeat 1 35 0 2 694 192 40 0 0 chr2R 14322581 14322606 -6824102 + (CTA)n Simple_repeat Simple_repeat 3 27 0 2 694 22 0 0 0 chr2R 14322730 14322752 -6823956 + AT_rich Low_complexity Low_complexity 1 22 0 2 694 210 37 0 0 chr2R 14326770 14326797 -6819911 + (T)n Simple_repeat Simple_repeat 1 27 0 2 694 210 262 0 45 chr2R 14327357 14327445 -6819263 + (CTG)n Simple_repeat Simple_repeat 1 84 0 2 694 203 318 0 0 chr2R 14328733 14328799 -6817909 + (CAA)n Simple_repeat Simple_repeat 2 67 0 2 694 198 0 0 0 chr2R 14332752 14332774 -6813934 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 2 694 22 56 0 0 chr2R 14333636 14333672 -6813036 + AT_rich Low_complexity Low_complexity 1 36 0 2 694 21 0 0 0 chr2R 14335394 14335415 -6811293 + AT_rich Low_complexity Low_complexity 1 21 0 2 694 207 167 41 20 chr2R 14343705 14343754 -6802954 + (CCAA)n Simple_repeat Simple_repeat 4 53 0 2 694 29 0 0 0 chr2R 14344437 14344466 -6802242 + AT_rich Low_complexity Low_complexity 1 29 0 2 694 217 89 0 43 chr2R 14345967 14346014 -6800694 + (TGG)n Simple_repeat Simple_repeat 2 46 0 2 694 186 143 0 0 chr2R 14346180 14346215 -6800493 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 694 189 74 0 0 chr2R 14347461 14347488 -6799220 + (TGG)n Simple_repeat Simple_repeat 1 27 0 2 694 220 114 44 22 chr2R 14348246 14348291 -6798417 + (CGAAA)n Simple_repeat Simple_repeat 5 50 0 2 694 231 269 0 0 chr2R 14351732 14351784 -6794924 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 694 23 0 0 0 chr2R 14360643 14360666 -6786042 + AT_rich Low_complexity Low_complexity 1 23 0 2 694 25 31 0 0 chr2R 14362370 14362402 -6784306 + AT_rich Low_complexity Low_complexity 1 32 0 2 694 23 0 0 0 chr2R 14367033 14367056 -6779652 + AT_rich Low_complexity Low_complexity 1 23 0 2 694 201 152 0 0 chr2R 14367821 14367854 -6778854 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 694 236 143 18 0 chr2R 14369631 14369687 -6777021 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 694 21 0 0 0 chr2R 14372073 14372094 -6774614 + AT_rich Low_complexity Low_complexity 1 21 0 2 694 23 0 0 0 chr2R 14373987 14374010 -6772698 + AT_rich Low_complexity Low_complexity 1 23 0 2 694 189 74 0 0 chr2R 14374269 14374296 -6772412 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 694 515 45 0 15 chr2R 14374725 14374793 -6771915 - DNAREP1_DM LINE Penelope 0 594 528 2 694 3730 0 0 5 chr2R 14375380 14375781 -6770927 + BLOOD_LTR LTR Gypsy 1 399 0 2 694 60243 0 0 0 chr2R 14375781 14382392 -6764316 + BLOOD_I LTR Gypsy 1 6613 0 2 694 3730 0 0 5 chr2R 14382392 14382793 -6763915 + BLOOD_LTR LTR Gypsy 1 399 0 2 694 254 246 15 0 chr2R 14383915 14383980 -6762728 + GA-rich Low_complexity Low_complexity 3 68 0 2 694 233 164 18 18 chr2R 14388404 14388460 -6758248 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 694 290 267 0 0 chr2R 14390773 14390848 -6755860 + DNAREP1_DM LINE Penelope 50 124 -470 2 694 22 56 0 0 chr2R 14401710 14401746 -6744962 + AT_rich Low_complexity Low_complexity 1 36 0 2 694 186 71 0 0 chr2R 14402444 14402472 -6744236 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 694 32 43 0 0 chr2R 14402914 14402960 -6743748 + AT_rich Low_complexity Low_complexity 1 46 0 2 694 31 88 0 0 chr2R 14403679 14403759 -6742949 + AT_rich Low_complexity Low_complexity 1 80 0 2 694 195 100 0 0 chr2R 14411253 14411283 -6735425 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 694 21 71 0 0 chr2R 14412158 14412200 -6734508 + AT_rich Low_complexity Low_complexity 1 42 0 2 694 210 167 0 0 chr2R 14414800 14414836 -6731872 + (CGAAT)n Simple_repeat Simple_repeat 2 37 0 2 695 35 24 0 0 chr2R 14423097 14423139 -6723569 + AT_rich Low_complexity Low_complexity 1 42 0 2 695 21 0 0 0 chr2R 14426881 14426902 -6719806 + AT_rich Low_complexity Low_complexity 1 21 0 2 695 221 193 53 0 chr2R 14435297 14435354 -6711354 + A-rich Low_complexity Low_complexity 3 62 0 2 695 181 151 38 0 chr2R 14435421 14435474 -6711234 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 695 243 203 0 0 chr2R 14436117 14436186 -6710522 + (TA)n Simple_repeat Simple_repeat 2 70 0 2 695 198 150 0 0 chr2R 14437709 14437749 -6708959 + (A)n Simple_repeat Simple_repeat 1 40 0 2 695 243 0 0 0 chr2R 14437769 14437796 -6708912 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 2 695 33 0 0 0 chr2R 14441124 14441157 -6705551 + AT_rich Low_complexity Low_complexity 1 33 0 2 695 183 129 0 0 chr2R 14448496 14448527 -6698181 + (CTG)n Simple_repeat Simple_repeat 2 32 0 2 695 23 0 0 0 chr2R 14449692 14449715 -6696993 + AT_rich Low_complexity Low_complexity 1 23 0 2 695 182 130 65 0 chr2R 14453816 14453862 -6692846 + (GAGTG)n Simple_repeat Simple_repeat 3 51 0 2 695 22 80 0 0 chr2R 14456789 14456839 -6689869 + AT_rich Low_complexity Low_complexity 1 50 0 2 695 207 69 0 0 chr2R 14459496 14459525 -6687183 + (CTG)n Simple_repeat Simple_repeat 2 30 0 2 695 234 229 0 0 chr2R 14462051 14462099 -6684609 + (CAG)n Simple_repeat Simple_repeat 3 50 0 2 695 3355 3 0 0 chr2R 14463357 14463718 -6682990 + BEL_LTR LTR Pao 1 361 0 2 695 50845 0 0 1 chr2R 14463718 14469126 -6677582 + BEL_I LTR Pao 1 5404 0 2 695 3355 3 0 0 chr2R 14469126 14469487 -6677221 + BEL_LTR LTR Pao 1 361 0 2 695 200 194 0 0 chr2R 14470878 14470914 -6675794 + GA-rich Low_complexity Low_complexity 1 36 0 2 695 29 28 0 0 chr2R 14471585 14471621 -6675087 + AT_rich Low_complexity Low_complexity 1 36 0 2 695 198 0 0 0 chr2R 14473543 14473565 -6673143 + (ATG)n Simple_repeat Simple_repeat 3 24 0 2 695 31 44 0 0 chr2R 14475335 14475380 -6671328 + AT_rich Low_complexity Low_complexity 1 45 0 2 695 3970 2 0 2 chr2R 14478427 14478856 -6667852 + ROO_LTR LTR Pao 1 428 0 2 695 74619 1 3 0 chr2R 14478856 14487092 -6659616 + ROO_I LTR Pao 1 8256 0 2 695 3970 2 0 2 chr2R 14487092 14487521 -6659187 + ROO_LTR LTR Pao 1 428 0 2 695 180 77 0 0 chr2R 14487728 14487754 -6658954 + (ACTG)n Simple_repeat Simple_repeat 2 27 0 2 695 345 146 0 0 chr2R 14492270 14492325 -6654383 - DNAREP1_DM LINE Penelope -539 55 1 2 695 21 36 0 0 chr2R 14492876 14492904 -6653804 + AT_rich Low_complexity Low_complexity 1 28 0 2 695 229 245 0 0 chr2R 14497772 14497825 -6648883 + (CCCCAG)n Simple_repeat Simple_repeat 6 58 0 2 695 24 0 0 0 chr2R 14499594 14499618 -6647090 + AT_rich Low_complexity Low_complexity 1 24 0 2 695 24 0 0 0 chr2R 14508469 14508493 -6638215 + AT_rich Low_complexity Low_complexity 1 24 0 2 695 21 36 0 0 chr2R 14519606 14519634 -6627074 + AT_rich Low_complexity Low_complexity 1 28 0 2 695 321 89 0 0 chr2R 14521266 14521311 -6625397 + (CCA)n Simple_repeat Simple_repeat 2 46 0 2 695 220 417 0 17 chr2R 14521348 14521526 -6625182 + (CCG)n Simple_repeat Simple_repeat 3 177 0 2 695 212 79 53 0 chr2R 14522459 14522497 -6624211 + (TTGG)n Simple_repeat Simple_repeat 1 40 0 2 695 21 36 0 0 chr2R 14527581 14527609 -6619099 + AT_rich Low_complexity Low_complexity 1 28 0 2 695 26 0 0 0 chr2R 14527791 14527817 -6618891 + AT_rich Low_complexity Low_complexity 1 26 0 2 695 226 277 0 15 chr2R 14532377 14532443 -6614265 + (CAG)n Simple_repeat Simple_repeat 3 67 0 2 695 270 164 0 0 chr2R 14532870 14532925 -6613783 - ROO_I LTR Pao -7523 733 679 2 695 189 0 0 0 chr2R 14533233 14533254 -6613454 + (AGCTG)n Simple_repeat Simple_repeat 1 21 0 2 695 276 222 0 0 chr2R 14534754 14534808 -6611900 - DNAREP1_DM LINE Penelope -540 54 1 2 695 23 33 0 0 chr2R 14535162 14535192 -6611516 + AT_rich Low_complexity Low_complexity 1 30 0 2 695 22 0 0 0 chr2R 14535700 14535722 -6610986 + AT_rich Low_complexity Low_complexity 1 22 0 2 695 207 139 0 0 chr2R 14535843 14535879 -6610829 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2 695 198 0 0 0 chr2R 14537300 14537322 -6609386 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 695 205 171 0 0 chr2R 14538077 14538112 -6608596 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 695 258 32 0 0 chr2R 14541724 14541755 -6604953 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 695 213 217 0 0 chr2R 14542790 14542836 -6603872 + (ATGGTG)n Simple_repeat Simple_repeat 4 49 0 2 695 227 200 28 37 chr2R 14542992 14543101 -6603607 + (TTA)n Simple_repeat Simple_repeat 3 110 0 2 695 30 27 0 0 chr2R 14545833 14545870 -6600838 + AT_rich Low_complexity Low_complexity 1 37 0 2 696 26 30 0 0 chr2R 14550294 14550327 -6596381 + AT_rich Low_complexity Low_complexity 1 33 0 2 696 22 35 0 0 chr2R 14556724 14556753 -6589955 + AT_rich Low_complexity Low_complexity 1 29 0 2 696 252 59 0 0 chr2R 14558970 14559004 -6587704 + (TTG)n Simple_repeat Simple_repeat 3 36 0 2 696 25 31 0 0 chr2R 14559248 14559280 -6587428 + AT_rich Low_complexity Low_complexity 1 32 0 2 696 180 163 0 0 chr2R 14560833 14560876 -6585832 + T-rich Low_complexity Low_complexity 1 43 0 2 696 27 0 0 0 chr2R 14561208 14561235 -6585473 + AT_rich Low_complexity Low_complexity 1 27 0 2 696 22 56 0 0 chr2R 14561304 14561340 -6585368 + AT_rich Low_complexity Low_complexity 1 36 0 2 696 23 33 0 0 chr2R 14565397 14565427 -6581281 + AT_rich Low_complexity Low_complexity 1 30 0 2 696 25 31 0 0 chr2R 14565466 14565498 -6581210 + AT_rich Low_complexity Low_complexity 1 32 0 2 696 227 169 0 84 chr2R 14573532 14573603 -6573105 - ROO_I LTR Pao -7522 734 670 2 696 27 29 0 0 chr2R 14574389 14574423 -6572285 + AT_rich Low_complexity Low_complexity 1 34 0 2 696 28 48 0 0 chr2R 14577132 14577174 -6569534 + AT_rich Low_complexity Low_complexity 1 42 0 2 696 200 315 30 15 chr2R 14577632 14577764 -6568944 + T-rich Low_complexity Low_complexity 2 135 0 2 696 33 25 0 0 chr2R 14578081 14578121 -6568587 + AT_rich Low_complexity Low_complexity 1 40 0 2 696 22 35 0 0 chr2R 14579219 14579248 -6567460 + AT_rich Low_complexity Low_complexity 1 29 0 2 696 24 0 0 0 chr2R 14582485 14582509 -6564199 + AT_rich Low_complexity Low_complexity 1 24 0 2 696 228 35 0 0 chr2R 14589333 14589362 -6557346 + (CAA)n Simple_repeat Simple_repeat 3 31 0 2 696 46 45 0 0 chr2R 14598500 14598567 -6548141 + AT_rich Low_complexity Low_complexity 1 67 0 2 696 22 0 0 0 chr2R 14598618 14598640 -6548068 + AT_rich Low_complexity Low_complexity 1 22 0 2 696 228 133 44 0 chr2R 14598680 14598725 -6547983 + T-rich Low_complexity Low_complexity 1 47 0 2 696 22 0 0 0 chr2R 14601660 14601682 -6545026 + AT_rich Low_complexity Low_complexity 1 22 0 2 696 201 132 0 0 chr2R 14603499 14603537 -6543171 + (ATG)n Simple_repeat Simple_repeat 1 38 0 2 696 26 93 0 0 chr2R 14604300 14604375 -6542333 + AT_rich Low_complexity Low_complexity 1 75 0 2 696 211 195 0 0 chr2R 14604578 14604619 -6542089 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 696 245 116 28 28 chr2R 14606361 14606432 -6540276 + GA-rich Low_complexity Low_complexity 3 73 0 2 696 26 30 0 0 chr2R 14607086 14607119 -6539589 + AT_rich Low_complexity Low_complexity 1 33 0 2 696 212 171 0 0 chr2R 14608011 14608052 -6538656 + (CATATA)n Simple_repeat Simple_repeat 6 46 0 2 696 21 36 0 0 chr2R 14610787 14610815 -6535893 + AT_rich Low_complexity Low_complexity 1 28 0 2 696 21 0 0 0 chr2R 14618203 14618224 -6528484 + AT_rich Low_complexity Low_complexity 1 21 0 2 696 27 0 0 0 chr2R 14619823 14619850 -6526858 + AT_rich Low_complexity Low_complexity 1 27 0 2 696 201 211 0 0 chr2R 14620965 14621017 -6525691 + (CAGTT)n Simple_repeat Simple_repeat 4 55 0 2 696 233 232 0 0 chr2R 14621219 14621302 -6525406 + A-rich Low_complexity Low_complexity 1 83 0 2 696 318 26 0 0 chr2R 14622884 14622923 -6523785 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 696 25 31 0 0 chr2R 14623419 14623451 -6523257 + AT_rich Low_complexity Low_complexity 1 32 0 2 696 21 0 0 0 chr2R 14623978 14623999 -6522709 + AT_rich Low_complexity Low_complexity 1 21 0 2 696 233 103 59 0 chr2R 14624341 14624409 -6522299 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 696 183 186 0 0 chr2R 14624763 14624806 -6521902 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 696 225 0 0 0 chr2R 14628843 14628868 -6517840 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 696 23 0 0 0 chr2R 14632508 14632531 -6514177 + AT_rich Low_complexity Low_complexity 1 23 0 2 696 198 0 0 0 chr2R 14632947 14632969 -6513739 + (ATG)n Simple_repeat Simple_repeat 1 22 0 2 696 352 213 0 11 chr2R 14633456 14633551 -6513157 + ROO_I LTR Pao 641 734 -7522 2 696 274 238 19 29 chr2R 14633600 14633704 -6513004 + ROO_I LTR Pao 637 739 -7517 2 696 23 54 0 0 chr2R 14634512 14634549 -6512159 + AT_rich Low_complexity Low_complexity 1 37 0 2 696 237 33 0 0 chr2R 14635520 14635550 -6511158 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 696 204 208 0 0 chr2R 14635793 14635841 -6510867 + CT-rich Low_complexity Low_complexity 1 48 0 2 696 201 39 0 0 chr2R 14638484 14638510 -6508198 + (TGG)n Simple_repeat Simple_repeat 2 27 0 2 696 27 0 0 0 chr2R 14639412 14639439 -6507269 + AT_rich Low_complexity Low_complexity 1 27 0 2 696 21 36 0 0 chr2R 14640063 14640091 -6506617 + AT_rich Low_complexity Low_complexity 1 28 0 2 696 278 50 0 24 chr2R 14640156 14640197 -6506511 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 696 201 152 0 0 chr2R 14640552 14640585 -6506123 + (TATAG)n Simple_repeat Simple_repeat 2 34 0 2 696 201 208 21 0 chr2R 14640750 14640798 -6505910 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 696 198 103 0 0 chr2R 14641083 14641112 -6505596 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 696 180 0 0 0 chr2R 14646233 14646253 -6500455 + (TCC)n Simple_repeat Simple_repeat 2 21 0 2 696 21 36 0 0 chr2R 14648002 14648030 -6498678 + AT_rich Low_complexity Low_complexity 1 28 0 2 696 216 86 0 0 chr2R 14650641 14650676 -6496032 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 696 192 135 0 0 chr2R 14652397 14652434 -6494274 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 696 22 0 0 0 chr2R 14656542 14656564 -6490144 + AT_rich Low_complexity Low_complexity 1 22 0 2 696 269 118 20 0 chr2R 14656797 14656848 -6489860 + (CACCAT)n Simple_repeat Simple_repeat 3 54 0 2 696 23 0 0 0 chr2R 14661140 14661163 -6485545 + AT_rich Low_complexity Low_complexity 1 23 0 2 696 31 0 0 0 chr2R 14661570 14661601 -6485107 + AT_rich Low_complexity Low_complexity 1 31 0 2 696 36 40 0 0 chr2R 14662307 14662357 -6484351 + AT_rich Low_complexity Low_complexity 1 50 0 2 696 24 53 0 0 chr2R 14664548 14664586 -6482122 + AT_rich Low_complexity Low_complexity 1 38 0 2 696 25 31 0 0 chr2R 14664609 14664641 -6482067 + AT_rich Low_complexity Low_complexity 1 32 0 2 696 29 47 0 0 chr2R 14664669 14664712 -6481996 + AT_rich Low_complexity Low_complexity 1 43 0 2 696 215 21 83 21 chr2R 14664716 14664764 -6481944 + (TATAA)n Simple_repeat Simple_repeat 4 54 0 2 696 21 0 0 0 chr2R 14666536 14666557 -6480151 + AT_rich Low_complexity Low_complexity 1 21 0 2 696 204 125 0 0 chr2R 14667759 14667791 -6478917 + (CAATT)n Simple_repeat Simple_repeat 1 32 0 2 696 25 31 0 0 chr2R 14669860 14669892 -6476816 + AT_rich Low_complexity Low_complexity 1 32 0 2 696 21 36 0 0 chr2R 14671027 14671055 -6475653 + AT_rich Low_complexity Low_complexity 1 28 0 2 696 210 105 0 0 chr2R 14671193 14671231 -6475477 + (T)n Simple_repeat Simple_repeat 1 38 0 2 696 180 125 0 0 chr2R 14673105 14673137 -6473571 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 697 203 235 28 42 chr2R 14682130 14682201 -6464507 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2 697 21 36 0 0 chr2R 14684307 14684335 -6462373 + AT_rich Low_complexity Low_complexity 1 28 0 2 697 186 43 0 0 chr2R 14684745 14684768 -6461940 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2 697 213 159 0 0 chr2R 14688030 14688074 -6458634 + CT-rich Low_complexity Low_complexity 1 44 0 2 697 192 77 0 0 chr2R 14690075 14690101 -6456607 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 697 267 246 0 0 chr2R 14693632 14693701 -6453007 + GA-rich Low_complexity Low_complexity 2 70 0 2 697 212 167 0 0 chr2R 14693757 14693793 -6452915 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 697 28 0 0 0 chr2R 14694375 14694403 -6452305 + AT_rich Low_complexity Low_complexity 1 28 0 2 697 21 36 0 0 chr2R 14694735 14694763 -6451945 + AT_rich Low_complexity Low_complexity 1 28 0 2 697 234 184 0 0 chr2R 14695835 14695884 -6450824 + T-rich Low_complexity Low_complexity 1 49 0 2 697 22 56 0 0 chr2R 14698600 14698636 -6448072 + AT_rich Low_complexity Low_complexity 1 36 0 2 697 218 195 0 0 chr2R 14699969 14700010 -6446698 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 2 697 23 0 0 0 chr2R 14701337 14701360 -6445348 + AT_rich Low_complexity Low_complexity 1 23 0 2 697 23 0 0 0 chr2R 14701533 14701556 -6445152 + AT_rich Low_complexity Low_complexity 1 23 0 2 697 29 28 0 0 chr2R 14706523 14706559 -6440149 + AT_rich Low_complexity Low_complexity 1 36 0 2 697 22 0 0 0 chr2R 14706868 14706890 -6439818 + AT_rich Low_complexity Low_complexity 1 22 0 2 697 21 0 0 0 chr2R 14707093 14707114 -6439594 + AT_rich Low_complexity Low_complexity 1 21 0 2 697 22 0 0 0 chr2R 14714124 14714146 -6432562 + AT_rich Low_complexity Low_complexity 1 22 0 2 697 21 82 0 0 chr2R 14717420 14717469 -6429239 + AT_rich Low_complexity Low_complexity 1 49 0 2 697 34 0 0 0 chr2R 14720873 14720907 -6425801 + AT_rich Low_complexity Low_complexity 1 34 0 2 697 31 44 0 0 chr2R 14722379 14722424 -6424284 + AT_rich Low_complexity Low_complexity 1 45 0 2 697 23 0 0 0 chr2R 14734204 14734227 -6412481 + AT_rich Low_complexity Low_complexity 1 23 0 2 697 191 36 0 35 chr2R 14742865 14742894 -6403814 + (TATG)n Simple_repeat Simple_repeat 2 29 0 2 697 37 52 0 0 chr2R 14744930 14744988 -6401720 + AT_rich Low_complexity Low_complexity 1 58 0 2 697 15886 2 0 1 chr2R 14745795 14747523 -6399185 - BARI_DM DNA Tc1 0 1728 2 2 697 234 105 0 0 chr2R 14747523 14747561 -6399147 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 697 180 0 0 0 chr2R 14748705 14748725 -6397983 + (TAA)n Simple_repeat Simple_repeat 3 22 0 2 697 31 0 0 0 chr2R 14752577 14752608 -6394100 + AT_rich Low_complexity Low_complexity 1 31 0 2 697 24 32 0 0 chr2R 14752781 14752812 -6393896 + AT_rich Low_complexity Low_complexity 1 31 0 2 697 31 0 0 0 chr2R 14755362 14755393 -6391315 + AT_rich Low_complexity Low_complexity 1 31 0 2 697 204 143 0 0 chr2R 14756100 14756142 -6390566 + (A)n Simple_repeat Simple_repeat 1 42 0 2 697 228 232 0 28 chr2R 14758288 14758359 -6388349 - ROO_I LTR Pao -7522 734 666 2 697 327 196 11 0 chr2R 14758464 14758556 -6388152 + ROO_I LTR Pao 651 743 -7513 2 697 221 170 21 0 chr2R 14759054 14759101 -6387607 + (CAG)n Simple_repeat Simple_repeat 3 50 0 2 697 203 152 0 0 chr2R 14761714 14761747 -6384961 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 697 24 0 0 0 chr2R 14762349 14762373 -6384335 + AT_rich Low_complexity Low_complexity 1 24 0 2 697 263 220 0 17 chr2R 14762706 14762766 -6383942 + DNAREP1_DM LINE Penelope 1 59 -535 2 697 298 247 0 13 chr2R 14762828 14762906 -6383802 + DNAREP1_DM LINE Penelope 518 594 0 2 697 261 119 0 0 chr2R 14763737 14763779 -6382929 + (CAG)n Simple_repeat Simple_repeat 3 44 0 2 697 22 0 0 0 chr2R 14763998 14764020 -6382688 + AT_rich Low_complexity Low_complexity 1 22 0 2 697 21 0 0 0 chr2R 14764611 14764632 -6382076 + AT_rich Low_complexity Low_complexity 1 21 0 2 697 25 31 0 0 chr2R 14764982 14765014 -6381694 + AT_rich Low_complexity Low_complexity 1 32 0 2 697 183 80 0 0 chr2R 14765296 14765321 -6381387 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2 697 195 42 0 0 chr2R 14765404 14765428 -6381280 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 697 340 133 0 98 chr2R 14766017 14766109 -6380599 + ROO_I LTR Pao 648 730 -7526 2 697 256 226 0 89 chr2R 14766366 14766478 -6380230 + ROO_I LTR Pao 632 733 -7523 2 697 195 42 0 0 chr2R 14766896 14766920 -6379788 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 697 22 35 0 0 chr2R 14767201 14767230 -6379478 + AT_rich Low_complexity Low_complexity 1 29 0 2 697 21 57 0 0 chr2R 14767247 14767282 -6379426 + AT_rich Low_complexity Low_complexity 1 35 0 2 697 238 187 0 39 chr2R 14770946 14771024 -6375684 + (TTG)n Simple_repeat Simple_repeat 1 75 0 2 697 258 105 0 0 chr2R 14771962 14772000 -6374708 + (CAT)n Simple_repeat Simple_repeat 3 40 0 2 697 220 27 0 51 chr2R 14772097 14772136 -6374572 + (CAGC)n Simple_repeat Simple_repeat 3 39 0 2 697 25 31 0 0 chr2R 14772640 14772672 -6374036 + AT_rich Low_complexity Low_complexity 1 32 0 2 697 228 122 0 0 chr2R 14774037 14774078 -6372630 + (A)n Simple_repeat Simple_repeat 1 41 0 2 697 189 121 0 0 chr2R 14775300 14775333 -6371375 + (CAGT)n Simple_repeat Simple_repeat 3 35 0 2 697 183 186 0 0 chr2R 14778014 14778057 -6368651 + GA-rich Low_complexity Low_complexity 2 44 0 2 697 228 35 0 0 chr2R 14778817 14778846 -6367862 + (ATTCG)n Simple_repeat Simple_repeat 1 29 0 2 697 28 79 0 0 chr2R 14781258 14781321 -6365387 + AT_rich Low_complexity Low_complexity 1 63 0 2 697 213 39 0 0 chr2R 14782265 14782291 -6364417 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 697 27 29 0 0 chr2R 14782392 14782426 -6364282 + AT_rich Low_complexity Low_complexity 1 34 0 2 697 245 29 29 0 chr2R 14783984 14784018 -6362690 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 697 26 82 0 0 chr2R 14784854 14784915 -6361793 + AT_rich Low_complexity Low_complexity 1 61 0 2 697 21 71 0 0 chr2R 14791656 14791698 -6355010 + AT_rich Low_complexity Low_complexity 1 42 0 2 697 263 87 0 42 chr2R 14791880 14791928 -6354780 + (CTG)n Simple_repeat Simple_repeat 2 47 0 2 697 227 358 0 0 chr2R 14792039 14792120 -6354588 + (CTG)n Simple_repeat Simple_repeat 3 83 0 2 697 213 197 70 0 chr2R 14792438 14792509 -6354199 + A-rich Low_complexity Low_complexity 1 76 0 2 697 256 169 0 44 chr2R 14794350 14794418 -6352290 + ROO_I LTR Pao 641 705 -7551 2 697 21 36 0 0 chr2R 14795559 14795587 -6351121 + AT_rich Low_complexity Low_complexity 1 28 0 2 697 250 203 0 15 chr2R 14796038 14796103 -6350605 + ROO_I LTR Pao 661 724 -7532 2 697 210 91 0 0 chr2R 14801056 14801089 -6345619 + (CAATC)n Simple_repeat Simple_repeat 5 37 0 2 697 22 35 0 0 chr2R 14804385 14804414 -6342294 + AT_rich Low_complexity Low_complexity 1 29 0 2 697 21 0 0 0 chr2R 14805236 14805257 -6341451 + AT_rich Low_complexity Low_complexity 1 21 0 2 697 248 53 26 0 chr2R 14806370 14806408 -6340300 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 697 205 214 36 0 chr2R 14806554 14806610 -6340098 + (CAG)n Simple_repeat Simple_repeat 1 58 0 2 697 21 36 0 0 chr2R 14808391 14808419 -6338289 + AT_rich Low_complexity Low_complexity 1 28 0 2 697 249 33 0 0 chr2R 14808553 14808583 -6338125 + (AGTTG)n Simple_repeat Simple_repeat 1 30 0 2 697 183 80 0 0 chr2R 14808697 14808722 -6337986 + (TCG)n Simple_repeat Simple_repeat 2 26 0 2 697 25 0 0 0 chr2R 14809189 14809214 -6337494 + AT_rich Low_complexity Low_complexity 1 25 0 2 698 255 297 0 0 chr2R 14812665 14812729 -6333979 + (CTGGGG)n Simple_repeat Simple_repeat 1 64 0 2 698 26 30 0 0 chr2R 14813034 14813067 -6333641 + AT_rich Low_complexity Low_complexity 1 33 0 2 698 21 36 0 0 chr2R 14814172 14814200 -6332508 + AT_rich Low_complexity Low_complexity 1 28 0 2 698 240 184 0 0 chr2R 14814585 14814634 -6332074 + (CAA)n Simple_repeat Simple_repeat 3 51 0 2 698 186 43 0 0 chr2R 14816250 14816273 -6330435 + (TTG)n Simple_repeat Simple_repeat 1 23 0 2 698 23 68 0 0 chr2R 14817109 14817153 -6329555 + AT_rich Low_complexity Low_complexity 1 44 0 2 698 278 136 29 29 chr2R 14822223 14822291 -6324417 + ROO_I LTR Pao 661 728 -7528 2 698 27 0 0 0 chr2R 14822926 14822953 -6323755 + AT_rich Low_complexity Low_complexity 1 27 0 2 698 24 32 0 0 chr2R 14824474 14824505 -6322203 + AT_rich Low_complexity Low_complexity 1 31 0 2 698 243 61 0 0 chr2R 14829783 14829816 -6316892 + (CGAGT)n Simple_repeat Simple_repeat 2 34 0 2 698 378 100 0 0 chr2R 14829957 14830017 -6316691 + (CAG)n Simple_repeat Simple_repeat 3 62 0 2 698 21 36 0 0 chr2R 14835597 14835625 -6311083 + AT_rich Low_complexity Low_complexity 1 28 0 2 698 27 29 0 0 chr2R 14837644 14837678 -6309030 + AT_rich Low_complexity Low_complexity 1 34 0 2 698 213 186 0 0 chr2R 14837946 14838016 -6308692 + A-rich Low_complexity Low_complexity 1 70 0 2 698 201 39 0 0 chr2R 14839269 14839295 -6307413 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 698 183 42 0 0 chr2R 14840098 14840122 -6306586 + (T)n Simple_repeat Simple_repeat 1 24 0 2 698 230 211 0 0 chr2R 14840429 14840467 -6306241 + (CCCCAG)n Simple_repeat Simple_repeat 1 38 0 2 698 189 0 0 0 chr2R 14845764 14845785 -6300923 + (ATG)n Simple_repeat Simple_repeat 2 22 0 2 698 228 163 0 0 chr2R 14845826 14845869 -6300839 + A-rich Low_complexity Low_complexity 6 48 0 2 698 220 156 44 11 chr2R 14846253 14846344 -6300364 + (CA)n Simple_repeat Simple_repeat 1 94 0 2 698 25 31 0 0 chr2R 14846363 14846395 -6300313 + AT_rich Low_complexity Low_complexity 1 32 0 2 698 186 133 0 0 chr2R 14846906 14846936 -6299772 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 698 24 32 0 0 chr2R 14847282 14847313 -6299395 + AT_rich Low_complexity Low_complexity 1 31 0 2 698 30 0 0 0 chr2R 14848022 14848052 -6298656 + AT_rich Low_complexity Low_complexity 1 30 0 2 698 240 210 0 16 chr2R 14850338 14850401 -6296307 + (CAG)n Simple_repeat Simple_repeat 3 64 0 2 698 26 50 0 0 chr2R 14850827 14850867 -6295841 + AT_rich Low_complexity Low_complexity 1 40 0 2 698 21 57 0 0 chr2R 14851439 14851474 -6295234 + AT_rich Low_complexity Low_complexity 1 35 0 2 698 258 191 16 0 chr2R 14852004 14852067 -6294641 + ROO_I LTR Pao 650 713 -7543 2 698 311 186 11 34 chr2R 14852902 14852991 -6293717 + ROO_I LTR Pao 646 732 -7524 2 698 208 217 0 0 chr2R 14853414 14853460 -6293248 + (CAG)n Simple_repeat Simple_repeat 1 46 0 2 698 251 167 67 0 chr2R 14853904 14853964 -6292744 - ROO_I LTR Pao -7549 707 644 2 698 222 128 0 0 chr2R 14854149 14854188 -6292520 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 698 33 25 0 0 chr2R 14855247 14855287 -6291421 + AT_rich Low_complexity Low_complexity 1 40 0 2 698 183 114 0 0 chr2R 14859450 14859485 -6287223 + (TCC)n Simple_repeat Simple_repeat 1 35 0 2 698 214 259 0 0 chr2R 14860691 14860749 -6285959 + GA-rich Low_complexity Low_complexity 2 59 0 2 698 201 367 0 0 chr2R 14862900 14862998 -6283710 + (CAG)n Simple_repeat Simple_repeat 3 100 0 2 698 213 244 0 0 chr2R 14864095 14864181 -6282527 + GA-rich Low_complexity Low_complexity 2 87 0 2 698 468 273 0 0 chr2R 14866095 14866245 -6280463 + (CCCCAG)n Simple_repeat Simple_repeat 2 151 0 2 698 200 143 23 23 chr2R 14869024 14869067 -6277641 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 698 27 0 0 0 chr2R 14869590 14869617 -6277091 + AT_rich Low_complexity Low_complexity 1 27 0 2 698 35 88 0 0 chr2R 14870557 14870648 -6276060 + AT_rich Low_complexity Low_complexity 1 91 0 2 698 207 69 0 0 chr2R 14870914 14870943 -6275765 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 698 21 36 0 0 chr2R 14874384 14874412 -6272296 + AT_rich Low_complexity Low_complexity 1 28 0 2 698 243 0 0 0 chr2R 14875544 14875571 -6271137 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 698 22 0 0 0 chr2R 14875918 14875940 -6270768 + AT_rich Low_complexity Low_complexity 1 22 0 2 698 210 164 0 0 chr2R 14877027 14877082 -6269626 + (CAATC)n Simple_repeat Simple_repeat 5 59 0 2 698 21 36 0 0 chr2R 14877249 14877277 -6269431 + AT_rich Low_complexity Low_complexity 1 28 0 2 698 211 244 0 0 chr2R 14879356 14879401 -6267307 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 698 234 0 0 0 chr2R 14879579 14879605 -6267103 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 698 26 0 0 0 chr2R 14881729 14881755 -6264953 + AT_rich Low_complexity Low_complexity 1 26 0 2 698 202 118 0 29 chr2R 14885441 14885476 -6261232 + (CAG)n Simple_repeat Simple_repeat 1 34 0 2 698 269 174 0 34 chr2R 14885988 14886077 -6260631 + GA-rich Low_complexity Low_complexity 1 86 0 2 698 247 279 0 0 chr2R 14886372 14886440 -6260268 + GA-rich Low_complexity Low_complexity 2 69 0 2 698 21 0 0 0 chr2R 14887161 14887182 -6259526 + AT_rich Low_complexity Low_complexity 1 21 0 2 698 205 163 41 0 chr2R 14887313 14887362 -6259346 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 2 698 204 282 0 14 chr2R 14888693 14888765 -6257943 + (CAG)n Simple_repeat Simple_repeat 1 71 0 2 698 180 64 125 21 chr2R 14892050 14892098 -6254610 + (CAAAC)n Simple_repeat Simple_repeat 1 53 0 2 698 36 0 0 0 chr2R 14893067 14893103 -6253605 + AT_rich Low_complexity Low_complexity 1 36 0 2 698 32 43 0 0 chr2R 14897961 14898007 -6248701 + AT_rich Low_complexity Low_complexity 1 46 0 2 698 186 43 0 0 chr2R 14900266 14900289 -6246419 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 698 29 0 0 0 chr2R 14900505 14900534 -6246174 + AT_rich Low_complexity Low_complexity 1 29 0 2 698 207 88 0 0 chr2R 14902556 14902590 -6244118 + (T)n Simple_repeat Simple_repeat 1 34 0 2 698 222 136 0 0 chr2R 14902781 14902825 -6243883 + (GTCTG)n Simple_repeat Simple_repeat 5 48 0 2 698 22 0 0 0 chr2R 14906256 14906278 -6240430 + AT_rich Low_complexity Low_complexity 1 22 0 2 698 28 29 0 0 chr2R 14906436 14906471 -6240237 + AT_rich Low_complexity Low_complexity 1 35 0 2 698 22 35 0 0 chr2R 14907940 14907969 -6238739 + AT_rich Low_complexity Low_complexity 1 29 0 2 698 270 125 0 0 chr2R 14908241 14908289 -6238419 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 698 311 242 10 31 chr2R 14909878 14909976 -6236732 + (CATATA)n Simple_repeat Simple_repeat 5 100 0 2 698 228 67 0 0 chr2R 14910184 14910214 -6236494 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 698 23 33 0 0 chr2R 14911201 14911231 -6235477 + AT_rich Low_complexity Low_complexity 1 30 0 2 698 43 35 0 0 chr2R 14913596 14913653 -6233055 + AT_rich Low_complexity Low_complexity 1 57 0 2 698 386 118 13 38 chr2R 14915367 14915446 -6231262 - DMSAT6 Satellite Satellite -116 354 278 2 698 423 255 5 74 chr2R 14916450 14916653 -6230055 - ROO_I LTR Pao -7427 829 641 2 698 38 68 0 0 chr2R 14917185 14917258 -6229450 + AT_rich Low_complexity Low_complexity 1 73 0 2 698 219 36 0 0 chr2R 14918362 14918390 -6228318 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 698 186 118 0 0 chr2R 14918529 14918563 -6228145 + (T)n Simple_repeat Simple_repeat 1 34 0 2 698 216 67 0 0 chr2R 14918801 14918831 -6227877 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 698 22 0 0 0 chr2R 14920352 14920374 -6226334 + AT_rich Low_complexity Low_complexity 1 22 0 2 698 21 36 0 0 chr2R 14921808 14921836 -6224872 + AT_rich Low_complexity Low_complexity 1 28 0 2 698 195 162 0 0 chr2R 14924498 14924535 -6222173 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 698 219 88 0 0 chr2R 14924804 14924838 -6221870 + (CAGTT)n Simple_repeat Simple_repeat 2 35 0 2 698 245 109 0 21 chr2R 14924942 14924989 -6221719 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 698 21 0 0 0 chr2R 14927167 14927188 -6219520 + AT_rich Low_complexity Low_complexity 1 21 0 2 698 21 36 0 0 chr2R 14929471 14929499 -6217209 + AT_rich Low_complexity Low_complexity 1 28 0 2 698 208 121 0 0 chr2R 14929831 14929864 -6216844 + (CAG)n Simple_repeat Simple_repeat 1 33 0 2 698 510 17 0 0 chr2R 14930224 14930283 -6216425 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 698 194 62 31 0 chr2R 14933831 14933863 -6212845 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 698 201 158 0 0 chr2R 14936201 14936239 -6210469 + (ATTCG)n Simple_repeat Simple_repeat 2 39 0 2 698 28 0 0 0 chr2R 14937852 14937880 -6208828 + AT_rich Low_complexity Low_complexity 1 28 0 2 698 249 98 0 0 chr2R 14938529 14938570 -6208138 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 698 211 228 18 0 chr2R 14940043 14940100 -6206608 + (TTG)n Simple_repeat Simple_repeat 1 58 0 2 698 189 0 0 0 chr2R 14940251 14940272 -6206436 + (T)n Simple_repeat Simple_repeat 1 21 0 2 698 336 48 0 0 chr2R 14941201 14941243 -6205465 + (CGA)n Simple_repeat Simple_repeat 1 42 0 2 699 210 118 0 0 chr2R 14943724 14943758 -6202950 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 699 216 0 0 0 chr2R 14943890 14943914 -6202794 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 699 180 0 0 0 chr2R 14945994 14946014 -6200694 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 699 228 216 0 0 chr2R 14947706 14947757 -6198951 + (CCCCAA)n Simple_repeat Simple_repeat 2 52 0 2 699 27 0 0 0 chr2R 14949442 14949469 -6197239 + AT_rich Low_complexity Low_complexity 1 27 0 2 699 30 0 0 0 chr2R 14949917 14949947 -6196761 + AT_rich Low_complexity Low_complexity 1 30 0 2 699 227 143 0 0 chr2R 14952065 14952100 -6194608 + DNAREP1_DM LINE Penelope 2 36 -558 2 699 281 0 0 0 chr2R 14952147 14952177 -6194531 + DNAREP1_DM LINE Penelope 565 594 0 2 699 227 194 0 42 chr2R 14953574 14953642 -6193066 + T-rich Low_complexity Low_complexity 1 65 0 2 699 27 81 0 0 chr2R 14955413 14955475 -6191233 + AT_rich Low_complexity Low_complexity 1 62 0 2 699 183 129 0 0 chr2R 14956540 14956571 -6190137 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 699 29 47 0 0 chr2R 14956774 14956817 -6189891 + AT_rich Low_complexity Low_complexity 1 43 0 2 699 242 303 0 0 chr2R 14960728 14960804 -6185904 + T-rich Low_complexity Low_complexity 2 77 0 2 699 225 119 0 0 chr2R 14962229 14962271 -6184437 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 699 21 0 0 0 chr2R 14964379 14964400 -6182308 + AT_rich Low_complexity Low_complexity 1 21 0 2 699 183 42 0 0 chr2R 14965471 14965495 -6181213 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 699 180 0 0 0 chr2R 14967830 14967850 -6178858 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 699 198 0 0 0 chr2R 14969848 14969870 -6176838 + (GA)n Simple_repeat Simple_repeat 2 23 0 2 699 23 0 0 0 chr2R 14970891 14970914 -6175794 + AT_rich Low_complexity Low_complexity 1 23 0 2 699 27 49 0 0 chr2R 14973092 14973133 -6173575 + AT_rich Low_complexity Low_complexity 1 41 0 2 699 267 31 0 0 chr2R 14973762 14973794 -6172914 + (AACTG)n Simple_repeat Simple_repeat 4 35 0 2 699 29 0 0 0 chr2R 14974541 14974570 -6172138 + AT_rich Low_complexity Low_complexity 1 29 0 2 699 21 36 0 0 chr2R 14975330 14975358 -6171350 + AT_rich Low_complexity Low_complexity 1 28 0 2 699 22 56 0 0 chr2R 14976483 14976519 -6170189 + AT_rich Low_complexity Low_complexity 1 36 0 2 699 23 33 0 0 chr2R 14978143 14978173 -6168535 + AT_rich Low_complexity Low_complexity 1 30 0 2 699 22 0 0 0 chr2R 14979086 14979108 -6167600 + AT_rich Low_complexity Low_complexity 1 22 0 2 699 222 105 0 0 chr2R 14979429 14979467 -6167241 + (CAG)n Simple_repeat Simple_repeat 2 39 0 2 699 264 59 0 0 chr2R 14979851 14979885 -6166823 + (CATTT)n Simple_repeat Simple_repeat 2 35 0 2 699 26 0 0 0 chr2R 14984448 14984474 -6162234 + AT_rich Low_complexity Low_complexity 1 26 0 2 699 23 0 0 0 chr2R 14986754 14986777 -6159931 + AT_rich Low_complexity Low_complexity 1 23 0 2 699 219 236 0 0 chr2R 14989156 14989211 -6157497 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 699 231 88 0 0 chr2R 14989694 14989728 -6156980 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 699 27 29 0 0 chr2R 14992619 14992653 -6154055 + AT_rich Low_complexity Low_complexity 1 34 0 2 699 237 163 0 0 chr2R 14996001 14996050 -6150658 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 699 29 28 0 0 chr2R 14996216 14996252 -6150456 + AT_rich Low_complexity Low_complexity 1 36 0 2 699 42 0 0 0 chr2R 14999316 14999358 -6147350 + AT_rich Low_complexity Low_complexity 1 42 0 2 699 26 30 0 0 chr2R 15000821 15000854 -6145854 + AT_rich Low_complexity Low_complexity 1 33 0 2 699 28 0 0 0 chr2R 15003715 15003743 -6142965 + AT_rich Low_complexity Low_complexity 1 28 0 2 699 21 0 0 0 chr2R 15005412 15005433 -6141275 + AT_rich Low_complexity Low_complexity 1 21 0 2 699 294 98 0 0 chr2R 15006210 15006261 -6140447 + (CAG)n Simple_repeat Simple_repeat 3 53 0 2 699 22 0 0 0 chr2R 15009532 15009554 -6137154 + AT_rich Low_complexity Low_complexity 1 22 0 2 699 21 0 0 0 chr2R 15010127 15010148 -6136560 + AT_rich Low_complexity Low_complexity 1 21 0 2 699 36 77 0 0 chr2R 15012874 15012952 -6133756 + AT_rich Low_complexity Low_complexity 1 78 0 2 699 200 220 0 20 chr2R 15013294 15013345 -6133363 + (CGAAA)n Simple_repeat Simple_repeat 1 50 0 2 699 214 206 27 0 chr2R 15013555 15013628 -6133080 + T-rich Low_complexity Low_complexity 2 76 0 2 699 22 0 0 0 chr2R 15025801 15025823 -6120885 + AT_rich Low_complexity Low_complexity 1 22 0 2 699 212 128 62 21 chr2R 15026549 15026597 -6120111 + A-rich Low_complexity Low_complexity 4 53 0 2 699 192 97 0 0 chr2R 15029553 15029584 -6117124 + (TC)n Simple_repeat Simple_repeat 1 31 0 2 699 22 70 0 0 chr2R 15030297 15030340 -6116368 + AT_rich Low_complexity Low_complexity 1 43 0 2 699 207 139 0 0 chr2R 15031615 15031651 -6115057 + (GA)n Simple_repeat Simple_repeat 2 37 0 2 699 25 0 0 0 chr2R 15037423 15037448 -6109260 + AT_rich Low_complexity Low_complexity 1 25 0 2 699 24 0 0 0 chr2R 15038415 15038439 -6108269 + AT_rich Low_complexity Low_complexity 1 24 0 2 699 204 143 0 0 chr2R 15041363 15041405 -6105303 + (A)n Simple_repeat Simple_repeat 1 42 0 2 699 243 273 22 11 chr2R 15041860 15041949 -6104759 + (ACTG)n Simple_repeat Simple_repeat 3 92 0 2 699 259 202 0 50 chr2R 15043649 15043748 -6102960 + ROO_I LTR Pao 641 734 -7522 2 699 218 227 0 0 chr2R 15045232 15045276 -6101432 + A-rich Low_complexity Low_complexity 1 44 0 2 699 201 94 0 0 chr2R 15047321 15047353 -6099355 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 699 231 176 0 68 chr2R 15047437 15047510 -6099198 + ROO_I LTR Pao 636 703 -7553 2 699 192 40 0 0 chr2R 15049476 15049501 -6097207 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 699 198 0 0 0 chr2R 15049852 15049874 -6096834 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 699 22 56 0 0 chr2R 15050274 15050310 -6096398 + AT_rich Low_complexity Low_complexity 1 36 0 2 699 23 68 0 0 chr2R 15050649 15050693 -6096015 + AT_rich Low_complexity Low_complexity 1 44 0 2 699 22 35 0 0 chr2R 15050933 15050962 -6095746 + AT_rich Low_complexity Low_complexity 1 29 0 2 699 24 0 0 0 chr2R 15051280 15051304 -6095404 + AT_rich Low_complexity Low_complexity 1 24 0 2 699 27 29 0 0 chr2R 15053909 15053943 -6092765 + AT_rich Low_complexity Low_complexity 1 34 0 2 699 22 0 0 0 chr2R 15054143 15054165 -6092543 + AT_rich Low_complexity Low_complexity 1 22 0 2 699 219 114 0 0 chr2R 15055707 15055742 -6090966 + (GATTG)n Simple_repeat Simple_repeat 2 36 0 2 699 28 29 0 0 chr2R 15056845 15056880 -6089828 + AT_rich Low_complexity Low_complexity 1 35 0 2 699 212 131 0 21 chr2R 15057721 15057768 -6088940 + (CAGTT)n Simple_repeat Simple_repeat 1 46 0 2 699 21 0 0 0 chr2R 15058671 15058692 -6088016 + AT_rich Low_complexity Low_complexity 1 21 0 2 699 205 136 45 0 chr2R 15064376 15064420 -6082288 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 699 28 0 0 0 chr2R 15066413 15066441 -6080267 + AT_rich Low_complexity Low_complexity 1 28 0 2 699 180 0 0 0 chr2R 15068986 15069006 -6077702 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 2 699 200 193 16 66 chr2R 15070434 15070495 -6076213 + (TTG)n Simple_repeat Simple_repeat 3 60 0 2 699 207 0 0 0 chr2R 15070735 15070758 -6075950 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 700 216 0 0 0 chr2R 15074037 15074061 -6072647 + (CAG)n Simple_repeat Simple_repeat 2 25 0 2 700 231 342 0 0 chr2R 15074289 15074365 -6072343 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 2 700 23 0 0 0 chr2R 15074884 15074907 -6071801 + AT_rich Low_complexity Low_complexity 1 23 0 2 700 180 77 0 0 chr2R 15079932 15079958 -6066750 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 700 180 0 0 0 chr2R 15081296 15081316 -6065392 + (A)n Simple_repeat Simple_repeat 1 20 0 2 700 22 0 0 0 chr2R 15081419 15081441 -6065267 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 195 139 0 0 chr2R 15083028 15083064 -6063644 + (A)n Simple_repeat Simple_repeat 1 36 0 2 700 221 122 49 0 chr2R 15084819 15084860 -6061848 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 2 700 22 0 0 0 chr2R 15086660 15086682 -6060026 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 204 40 0 0 chr2R 15092283 15092308 -6054400 + (ATG)n Simple_repeat Simple_repeat 1 25 0 2 700 213 240 0 0 chr2R 15094779 15094829 -6051879 + A-rich Low_complexity Low_complexity 1 50 0 2 700 21 0 0 0 chr2R 15096181 15096202 -6050506 + AT_rich Low_complexity Low_complexity 1 21 0 2 700 24 0 0 0 chr2R 15096400 15096424 -6050284 + AT_rich Low_complexity Low_complexity 1 24 0 2 700 21 36 0 0 chr2R 15098579 15098607 -6048101 + AT_rich Low_complexity Low_complexity 1 28 0 2 700 207 0 0 0 chr2R 15103491 15103514 -6043194 + (CTG)n Simple_repeat Simple_repeat 1 23 0 2 700 26 30 0 0 chr2R 15103891 15103924 -6042784 + AT_rich Low_complexity Low_complexity 1 33 0 2 700 206 83 56 0 chr2R 15107633 15107669 -6039039 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 700 229 217 0 16 chr2R 15108185 15108246 -6038462 + T-rich Low_complexity Low_complexity 6 65 0 2 700 22 0 0 0 chr2R 15109421 15109443 -6037265 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 241 290 7 37 chr2R 15109953 15110089 -6036619 + T-rich Low_complexity Low_complexity 6 137 0 2 700 222 116 0 0 chr2R 15110826 15110869 -6035839 + (GGA)n Simple_repeat Simple_repeat 1 43 0 2 700 414 261 11 17 chr2R 15110877 15111056 -6035652 + (CAG)n Simple_repeat Simple_repeat 2 179 0 2 700 22 0 0 0 chr2R 15116295 15116317 -6030391 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 194 0 39 0 chr2R 15117304 15117330 -6029378 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 700 25 0 0 0 chr2R 15119567 15119592 -6027116 + AT_rich Low_complexity Low_complexity 1 25 0 2 700 210 71 0 0 chr2R 15120999 15121027 -6025681 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 700 23 0 0 0 chr2R 15121641 15121664 -6025044 + AT_rich Low_complexity Low_complexity 1 23 0 2 700 192 125 0 0 chr2R 15122271 15122303 -6024405 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 700 207 0 0 0 chr2R 15122866 15122889 -6023819 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 700 208 139 0 0 chr2R 15124971 15125007 -6021701 + (A)n Simple_repeat Simple_repeat 1 36 0 2 700 204 253 0 0 chr2R 15125684 15125759 -6020949 + GA-rich Low_complexity Low_complexity 6 80 0 2 700 238 200 0 0 chr2R 15127119 15127174 -6019534 + (CAG)n Simple_repeat Simple_repeat 1 55 0 2 700 26 30 0 0 chr2R 15130950 15130983 -6015725 + AT_rich Low_complexity Low_complexity 1 33 0 2 700 26 0 0 0 chr2R 15132035 15132061 -6014647 + AT_rich Low_complexity Low_complexity 1 26 0 2 700 22 35 0 0 chr2R 15134999 15135028 -6011680 + AT_rich Low_complexity Low_complexity 1 29 0 2 700 22 0 0 0 chr2R 15144352 15144374 -6002334 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 22 0 0 0 chr2R 15144460 15144482 -6002226 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 225 159 0 0 chr2R 15151385 15151429 -5995279 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 700 201 147 0 0 chr2R 15151666 15151700 -5995008 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 2 700 190 95 23 23 chr2R 15152764 15152807 -5993901 + (CAAAAA)n Simple_repeat Simple_repeat 1 43 0 2 700 201 138 0 0 chr2R 15157186 15157215 -5989493 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 700 22 0 0 0 chr2R 15157459 15157481 -5989227 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 205 167 0 0 chr2R 15158758 15158794 -5987914 + (CATATA)n Simple_repeat Simple_repeat 6 41 0 2 700 23 0 0 0 chr2R 15159017 15159040 -5987668 + AT_rich Low_complexity Low_complexity 1 23 0 2 700 201 94 0 0 chr2R 15161836 15161868 -5984840 + (A)n Simple_repeat Simple_repeat 1 32 0 2 700 31 58 0 0 chr2R 15162128 15162180 -5984528 + AT_rich Low_complexity Low_complexity 1 52 0 2 700 189 0 0 0 chr2R 15168462 15168483 -5978225 + (TAAAA)n Simple_repeat Simple_repeat 1 21 0 2 700 195 42 0 0 chr2R 15168600 15168624 -5978084 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 700 21 0 0 0 chr2R 15168935 15168956 -5977752 + AT_rich Low_complexity Low_complexity 1 21 0 2 700 240 257 13 13 chr2R 15170019 15170094 -5976614 + CT-rich Low_complexity Low_complexity 1 75 0 2 700 34 0 0 0 chr2R 15174463 15174497 -5972211 + AT_rich Low_complexity Low_complexity 1 34 0 2 700 33 0 0 0 chr2R 15176153 15176186 -5970522 + AT_rich Low_complexity Low_complexity 1 33 0 2 700 21 71 0 0 chr2R 15177333 15177375 -5969333 + AT_rich Low_complexity Low_complexity 1 42 0 2 700 21 36 0 0 chr2R 15180116 15180144 -5966564 + AT_rich Low_complexity Low_complexity 1 28 0 2 700 243 133 0 0 chr2R 15180707 15180752 -5965956 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 700 25 31 0 0 chr2R 15181684 15181716 -5964992 + AT_rich Low_complexity Low_complexity 1 32 0 2 700 198 0 0 0 chr2R 15182831 15182853 -5963855 + (T)n Simple_repeat Simple_repeat 1 22 0 2 700 23 0 0 0 chr2R 15184624 15184647 -5962061 + AT_rich Low_complexity Low_complexity 1 23 0 2 700 23 0 0 0 chr2R 15185961 15185984 -5960724 + AT_rich Low_complexity Low_complexity 1 23 0 2 700 26 0 0 0 chr2R 15189151 15189177 -5957531 + AT_rich Low_complexity Low_complexity 1 26 0 2 700 308 245 0 0 chr2R 15190787 15190881 -5955827 + ROO_I LTR Pao 641 734 -7522 2 701 195 114 0 0 chr2R 15206674 15206709 -5939999 + (T)n Simple_repeat Simple_repeat 1 35 0 2 701 246 105 0 0 chr2R 15206973 15207011 -5939697 + (CTG)n Simple_repeat Simple_repeat 1 38 0 2 701 211 256 0 0 chr2R 15216407 15216450 -5930258 + (CTGGGG)n Simple_repeat Simple_repeat 2 44 0 2 701 186 43 0 0 chr2R 15218873 15218896 -5927812 + (TTCGG)n Simple_repeat Simple_repeat 3 25 0 2 701 216 143 0 0 chr2R 15222001 15222043 -5924665 + (T)n Simple_repeat Simple_repeat 1 42 0 2 701 191 36 36 0 chr2R 15223567 15223595 -5923113 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 701 30 69 0 0 chr2R 15223915 15223973 -5922735 + AT_rich Low_complexity Low_complexity 1 58 0 2 701 22 0 0 0 chr2R 15224674 15224696 -5922012 + AT_rich Low_complexity Low_complexity 1 22 0 2 701 23 54 0 0 chr2R 15225888 15225925 -5920783 + AT_rich Low_complexity Low_complexity 1 37 0 2 701 21 0 0 0 chr2R 15226220 15226241 -5920467 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 21 36 0 0 chr2R 15226742 15226770 -5919938 + AT_rich Low_complexity Low_complexity 1 28 0 2 701 351 44 0 0 chr2R 15227010 15227055 -5919653 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 701 230 224 0 0 chr2R 15227198 15227247 -5919461 + (CATCC)n Simple_repeat Simple_repeat 3 51 0 2 701 22 0 0 0 chr2R 15228072 15228094 -5918614 + AT_rich Low_complexity Low_complexity 1 22 0 2 701 201 255 0 0 chr2R 15230169 15230220 -5916488 + (CAG)n Simple_repeat Simple_repeat 3 53 0 2 701 261 119 0 0 chr2R 15232869 15232911 -5913797 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 701 21 0 0 0 chr2R 15237433 15237454 -5909254 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 23 68 0 0 chr2R 15239245 15239289 -5907419 + AT_rich Low_complexity Low_complexity 1 44 0 2 701 222 62 0 0 chr2R 15242087 15242119 -5904589 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 701 36 0 0 0 chr2R 15243785 15243821 -5902887 + AT_rich Low_complexity Low_complexity 1 36 0 2 701 237 139 0 0 chr2R 15244073 15244116 -5902592 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 701 29 28 0 0 chr2R 15254755 15254791 -5891917 + AT_rich Low_complexity Low_complexity 1 36 0 2 701 24 0 0 0 chr2R 15255187 15255211 -5891497 + AT_rich Low_complexity Low_complexity 1 24 0 2 701 211 28 56 0 chr2R 15256160 15256196 -5890512 + (TTAA)n Simple_repeat Simple_repeat 2 39 0 2 701 22 0 0 0 chr2R 15258658 15258680 -5888028 + AT_rich Low_complexity Low_complexity 1 22 0 2 701 189 0 0 0 chr2R 15261685 15261706 -5885002 + (A)n Simple_repeat Simple_repeat 1 21 0 2 701 21 0 0 0 chr2R 15263866 15263887 -5882821 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 29 0 0 0 chr2R 15268214 15268243 -5878465 + AT_rich Low_complexity Low_complexity 1 29 0 2 701 33 0 0 0 chr2R 15269962 15269995 -5876713 + AT_rich Low_complexity Low_complexity 1 33 0 2 701 24 32 0 0 chr2R 15270294 15270325 -5876383 + AT_rich Low_complexity Low_complexity 1 31 0 2 701 28 0 0 0 chr2R 15271422 15271450 -5875258 + AT_rich Low_complexity Low_complexity 1 28 0 2 701 21 36 0 0 chr2R 15276749 15276777 -5869931 + AT_rich Low_complexity Low_complexity 1 28 0 2 701 215 275 0 0 chr2R 15277184 15277264 -5869444 + (TTAAA)n Simple_repeat Simple_repeat 1 80 0 2 701 21 0 0 0 chr2R 15284574 15284595 -5862113 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 268 243 0 0 chr2R 15285287 15285357 -5861351 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 701 25 31 0 0 chr2R 15285915 15285947 -5860761 + AT_rich Low_complexity Low_complexity 1 32 0 2 701 183 80 0 0 chr2R 15286208 15286233 -5860475 + (TTC)n Simple_repeat Simple_repeat 1 25 0 2 701 31 0 0 0 chr2R 15287031 15287062 -5859646 + AT_rich Low_complexity Low_complexity 1 31 0 2 701 29 0 0 0 chr2R 15294057 15294086 -5852622 + AT_rich Low_complexity Low_complexity 1 29 0 2 701 199 122 20 20 chr2R 15294203 15294253 -5852455 + (TAG)n Simple_repeat Simple_repeat 2 51 0 2 701 23 0 0 0 chr2R 15295088 15295111 -5851597 + AT_rich Low_complexity Low_complexity 1 23 0 2 701 213 250 12 12 chr2R 15295119 15295200 -5851508 + A-rich Low_complexity Low_complexity 1 81 0 2 701 22 35 0 0 chr2R 15295278 15295307 -5851401 + AT_rich Low_complexity Low_complexity 1 29 0 2 701 210 37 0 0 chr2R 15300586 15300613 -5846095 + (A)n Simple_repeat Simple_repeat 1 27 0 2 701 21 0 0 0 chr2R 15302281 15302302 -5844406 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 233 135 0 19 chr2R 15305082 15305135 -5841573 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 701 180 0 0 0 chr2R 15306587 15306607 -5840101 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 701 21 0 0 0 chr2R 15306656 15306677 -5840031 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 189 132 0 0 chr2R 15307079 15307117 -5839591 + (T)n Simple_repeat Simple_repeat 1 38 0 2 701 21 57 0 0 chr2R 15308172 15308207 -5838501 + AT_rich Low_complexity Low_complexity 1 35 0 2 701 22 0 0 0 chr2R 15309670 15309692 -5837016 + AT_rich Low_complexity Low_complexity 1 22 0 2 701 21 0 0 0 chr2R 15310076 15310097 -5836611 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 25 0 0 0 chr2R 15314644 15314669 -5832039 + AT_rich Low_complexity Low_complexity 1 25 0 2 701 22 0 0 0 chr2R 15319994 15320016 -5826692 + AT_rich Low_complexity Low_complexity 1 22 0 2 701 21 89 0 0 chr2R 15321150 15321206 -5825502 + AT_rich Low_complexity Low_complexity 1 56 0 2 701 26 0 0 0 chr2R 15322025 15322051 -5824657 + AT_rich Low_complexity Low_complexity 1 26 0 2 701 28 29 0 0 chr2R 15324882 15324917 -5821791 + AT_rich Low_complexity Low_complexity 1 35 0 2 701 33 73 0 0 chr2R 15333852 15333920 -5812788 + AT_rich Low_complexity Low_complexity 1 68 0 2 701 21 0 0 0 chr2R 15334006 15334027 -5812681 + AT_rich Low_complexity Low_complexity 1 21 0 2 701 180 0 0 0 chr2R 15334295 15334315 -5812393 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 702 29 28 0 0 chr2R 15339416 15339452 -5807256 + AT_rich Low_complexity Low_complexity 1 36 0 2 702 22 0 0 0 chr2R 15339554 15339576 -5807132 + AT_rich Low_complexity Low_complexity 1 22 0 2 702 348 68 38 75 chr2R 15339653 15339812 -5806896 + (TATAA)n Simple_repeat Simple_repeat 1 153 0 2 702 200 167 18 18 chr2R 15339838 15339893 -5806815 + A-rich Low_complexity Low_complexity 3 57 0 2 702 21 0 0 0 chr2R 15341019 15341040 -5805668 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 205 283 0 0 chr2R 15344700 15344760 -5801948 + A-rich Low_complexity Low_complexity 1 60 0 2 702 24 0 0 0 chr2R 15345416 15345440 -5801268 + AT_rich Low_complexity Low_complexity 1 24 0 2 702 23 68 0 0 chr2R 15346790 15346834 -5799874 + AT_rich Low_complexity Low_complexity 1 44 0 2 702 240 35 0 0 chr2R 15347647 15347676 -5799032 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2 702 231 61 0 0 chr2R 15350603 15350636 -5796072 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 702 233 229 0 0 chr2R 15356604 15356652 -5790056 + (CAA)n Simple_repeat Simple_repeat 2 49 0 2 702 265 19 93 0 chr2R 15361627 15361681 -5785027 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 702 21 0 0 0 chr2R 15362248 15362269 -5784439 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 25 51 0 0 chr2R 15365226 15365265 -5781443 + AT_rich Low_complexity Low_complexity 1 39 0 2 702 200 284 9 35 chr2R 15366482 15366595 -5780113 + T-rich Low_complexity Low_complexity 4 113 0 2 702 209 184 41 0 chr2R 15367469 15367518 -5779190 + T-rich Low_complexity Low_complexity 4 54 0 2 702 31 82 0 0 chr2R 15368991 15369064 -5777644 + AT_rich Low_complexity Low_complexity 1 73 0 2 702 233 222 0 0 chr2R 15369593 15369647 -5777061 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 2 702 267 114 0 0 chr2R 15369692 15369736 -5776972 + (CCAA)n Simple_repeat Simple_repeat 1 44 0 2 702 21 0 0 0 chr2R 15370291 15370312 -5776396 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 22 0 0 0 chr2R 15373158 15373180 -5773528 + AT_rich Low_complexity Low_complexity 1 22 0 2 702 21 0 0 0 chr2R 15377550 15377571 -5769137 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 24 32 0 0 chr2R 15381501 15381532 -5765176 + AT_rich Low_complexity Low_complexity 1 31 0 2 702 183 42 0 0 chr2R 15382562 15382586 -5764122 + (CTG)n Simple_repeat Simple_repeat 3 26 0 2 702 264 122 0 0 chr2R 15382688 15382729 -5763979 + (TTG)n Simple_repeat Simple_repeat 1 41 0 2 702 21 0 0 0 chr2R 15384703 15384724 -5761984 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 195 100 0 0 chr2R 15392274 15392304 -5754404 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 702 28 0 0 0 chr2R 15404823 15404851 -5741857 + AT_rich Low_complexity Low_complexity 1 28 0 2 702 36 0 0 0 chr2R 15405377 15405413 -5741295 + AT_rich Low_complexity Low_complexity 1 36 0 2 702 25 0 0 0 chr2R 15405960 15405985 -5740723 + AT_rich Low_complexity Low_complexity 1 25 0 2 702 21 36 0 0 chr2R 15409074 15409102 -5737606 + AT_rich Low_complexity Low_complexity 1 28 0 2 702 208 190 0 23 chr2R 15410674 15410760 -5735948 + (TTG)n Simple_repeat Simple_repeat 1 84 0 2 702 201 39 0 0 chr2R 15411509 15411535 -5735173 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 702 186 143 0 0 chr2R 15411653 15411688 -5735020 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 702 181 191 20 41 chr2R 15411829 15411927 -5734781 + (TATG)n Simple_repeat Simple_repeat 1 96 0 2 702 214 51 24 49 chr2R 15412341 15412382 -5734326 + (CTAAA)n Simple_repeat Simple_repeat 1 40 0 2 702 273 185 0 0 chr2R 15413621 15413686 -5733022 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 702 22 0 0 0 chr2R 15414716 15414738 -5731970 + AT_rich Low_complexity Low_complexity 1 22 0 2 702 35 58 0 34 chr2R 15415446 15415535 -5731173 + AT_rich Low_complexity Low_complexity 1 86 0 2 702 23 0 0 0 chr2R 15415585 15415608 -5731100 + AT_rich Low_complexity Low_complexity 1 23 0 2 702 22 56 0 0 chr2R 15415750 15415786 -5730922 + AT_rich Low_complexity Low_complexity 1 36 0 2 702 21 36 0 0 chr2R 15415852 15415880 -5730828 + AT_rich Low_complexity Low_complexity 1 28 0 2 702 31 82 0 0 chr2R 15416778 15416851 -5729857 + AT_rich Low_complexity Low_complexity 1 73 0 2 702 21 0 0 0 chr2R 15417077 15417098 -5729610 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 23 33 0 0 chr2R 15421579 15421609 -5725099 + AT_rich Low_complexity Low_complexity 1 30 0 2 702 315 152 0 0 chr2R 15425758 15425837 -5720871 + (TTG)n Simple_repeat Simple_repeat 1 79 0 2 702 21 0 0 0 chr2R 15434502 15434523 -5712185 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 22 0 0 0 chr2R 15438836 15438858 -5707850 + AT_rich Low_complexity Low_complexity 1 22 0 2 702 21 0 0 0 chr2R 15440140 15440161 -5706547 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 204 97 0 0 chr2R 15441323 15441354 -5705354 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 702 26 0 0 0 chr2R 15448156 15448182 -5698526 + AT_rich Low_complexity Low_complexity 1 26 0 2 702 21 0 0 0 chr2R 15448459 15448480 -5698228 + AT_rich Low_complexity Low_complexity 1 21 0 2 702 23 0 0 0 chr2R 15449634 15449657 -5697051 + AT_rich Low_complexity Low_complexity 1 23 0 2 702 192 125 0 0 chr2R 15451773 15451805 -5694903 + (T)n Simple_repeat Simple_repeat 1 32 0 2 702 216 164 0 0 chr2R 15452126 15452161 -5694547 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2 702 315 49 0 0 chr2R 15452161 15452202 -5694506 + (TTGG)n Simple_repeat Simple_repeat 4 44 0 2 702 216 164 0 0 chr2R 15452202 15452221 -5694487 + (TTG)n Simple_repeat Simple_repeat 1 19 0 2 702 25 0 0 0 chr2R 15453148 15453173 -5693535 + AT_rich Low_complexity Low_complexity 1 25 0 2 702 24 67 0 0 chr2R 15454833 15454878 -5691830 + AT_rich Low_complexity Low_complexity 1 45 0 2 702 194 143 0 20 chr2R 15455049 15455099 -5691609 + (TTG)n Simple_repeat Simple_repeat 2 50 0 2 702 231 242 10 29 chr2R 15455907 15456009 -5690699 + (TTG)n Simple_repeat Simple_repeat 1 100 0 2 702 255 137 13 27 chr2R 15456143 15456218 -5690490 + (TTG)n Simple_repeat Simple_repeat 1 74 0 2 702 201 178 22 0 chr2R 15457262 15457307 -5689401 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 702 198 143 0 0 chr2R 15458970 15459005 -5687703 + (CAGC)n Simple_repeat Simple_repeat 4 38 0 2 702 256 241 0 0 chr2R 15460459 15460517 -5686191 + (CTG)n Simple_repeat Simple_repeat 3 60 0 2 702 267 260 31 0 chr2R 15461342 15461438 -5685270 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 702 27 0 0 0 chr2R 15464418 15464445 -5682263 + AT_rich Low_complexity Low_complexity 1 27 0 2 702 21 0 0 0 chr2R 15465179 15465200 -5681508 + AT_rich Low_complexity Low_complexity 1 21 0 2 703 189 0 0 0 chr2R 15470059 15470080 -5676628 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 703 183 42 0 0 chr2R 15476641 15476665 -5670043 + (TTCC)n Simple_repeat Simple_repeat 3 26 0 2 703 201 132 0 0 chr2R 15477235 15477273 -5669435 + (CATGC)n Simple_repeat Simple_repeat 5 42 0 2 703 30 0 0 0 chr2R 15477608 15477638 -5669070 + AT_rich Low_complexity Low_complexity 1 30 0 2 703 23 0 0 0 chr2R 15479926 15479949 -5666759 + AT_rich Low_complexity Low_complexity 1 23 0 2 703 183 42 0 0 chr2R 15480171 15480195 -5666513 + (T)n Simple_repeat Simple_repeat 1 24 0 2 703 192 111 0 0 chr2R 15485129 15485165 -5661543 + (GTTTG)n Simple_repeat Simple_repeat 2 37 0 2 703 186 43 0 0 chr2R 15486990 15487013 -5659695 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 703 30 45 0 0 chr2R 15488186 15488230 -5658478 + AT_rich Low_complexity Low_complexity 1 44 0 2 703 612 102 0 0 chr2R 15490442 15490540 -5656168 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 2 703 213 39 0 0 chr2R 15492580 15492606 -5654102 + (CAT)n Simple_repeat Simple_repeat 3 28 0 2 703 279 93 0 0 chr2R 15492767 15492810 -5653898 + (CAGTT)n Simple_repeat Simple_repeat 4 46 0 2 703 249 167 0 0 chr2R 15493735 15493789 -5652919 + (TGGA)n Simple_repeat Simple_repeat 2 55 0 2 703 21 71 0 0 chr2R 15494952 15494994 -5651714 + AT_rich Low_complexity Low_complexity 1 42 0 2 703 270 180 0 0 chr2R 15496331 15496392 -5650316 + (TCTG)n Simple_repeat Simple_repeat 1 61 0 2 703 21 71 0 0 chr2R 15499487 15499529 -5647179 + AT_rich Low_complexity Low_complexity 1 42 0 2 703 270 180 0 0 chr2R 15500866 15500927 -5645781 + (TCTG)n Simple_repeat Simple_repeat 1 61 0 2 703 26 30 0 0 chr2R 15503462 15503495 -5643213 + AT_rich Low_complexity Low_complexity 1 33 0 2 703 251 220 0 0 chr2R 15503841 15503900 -5642808 + A-rich Low_complexity Low_complexity 1 59 0 2 703 31 44 0 0 chr2R 15504389 15504434 -5642274 + AT_rich Low_complexity Low_complexity 1 45 0 2 703 195 186 0 0 chr2R 15504603 15504646 -5642062 + (TTG)n Simple_repeat Simple_repeat 3 45 0 2 703 21 0 0 0 chr2R 15505465 15505486 -5641222 + AT_rich Low_complexity Low_complexity 1 21 0 2 703 192 158 0 0 chr2R 15505667 15505705 -5641003 + T-rich Low_complexity Low_complexity 1 38 0 2 703 212 184 0 0 chr2R 15506455 15506493 -5640215 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 703 207 170 0 0 chr2R 15508893 15508940 -5637768 + A-rich Low_complexity Low_complexity 1 47 0 2 703 222 37 0 0 chr2R 15508973 15509000 -5637708 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 2 703 31 26 0 0 chr2R 15511291 15511329 -5635379 + AT_rich Low_complexity Low_complexity 1 38 0 2 703 201 154 0 0 chr2R 15512698 15512737 -5633971 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 2 703 192 125 0 0 chr2R 15513816 15513848 -5632860 + (GGATG)n Simple_repeat Simple_repeat 5 36 0 2 703 370 79 16 16 chr2R 15514122 15514186 -5632522 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 703 258 32 0 0 chr2R 15514544 15514575 -5632133 + (CAGC)n Simple_repeat Simple_repeat 4 34 0 2 703 221 98 24 0 chr2R 15514632 15514673 -5632035 + (CTG)n Simple_repeat Simple_repeat 3 44 0 2 703 21 57 0 0 chr2R 15515734 15515769 -5630939 + AT_rich Low_complexity Low_complexity 1 35 0 2 703 189 132 0 0 chr2R 15517485 15517523 -5629185 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 703 29 28 0 0 chr2R 15518925 15518961 -5627747 + AT_rich Low_complexity Low_complexity 1 36 0 2 703 29 60 0 0 chr2R 15519131 15519181 -5627527 + AT_rich Low_complexity Low_complexity 1 50 0 2 703 22 0 0 0 chr2R 15519275 15519297 -5627411 + AT_rich Low_complexity Low_complexity 1 22 0 2 703 21 36 0 0 chr2R 15520468 15520496 -5626212 + AT_rich Low_complexity Low_complexity 1 28 0 2 703 189 107 0 0 chr2R 15521912 15521940 -5624768 + (T)n Simple_repeat Simple_repeat 1 28 0 2 703 235 222 0 0 chr2R 15528510 15528564 -5618144 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 703 37 69 0 0 chr2R 15528964 15529036 -5617672 + AT_rich Low_complexity Low_complexity 1 72 0 2 703 25 0 0 0 chr2R 15530479 15530504 -5616204 + AT_rich Low_complexity Low_complexity 1 25 0 2 703 22 35 0 0 chr2R 15538749 15538778 -5607930 + AT_rich Low_complexity Low_complexity 1 29 0 2 703 21 57 0 0 chr2R 15541472 15541507 -5605201 + AT_rich Low_complexity Low_complexity 1 35 0 2 703 255 31 0 0 chr2R 15542417 15542449 -5604259 + (CCCTG)n Simple_repeat Simple_repeat 4 35 0 2 703 238 191 0 21 chr2R 15542942 15542990 -5603718 + (CAG)n Simple_repeat Simple_repeat 1 47 0 2 703 210 118 0 0 chr2R 15543377 15543411 -5603297 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 703 24 0 0 0 chr2R 15543717 15543741 -5602967 + AT_rich Low_complexity Low_complexity 1 24 0 2 703 27 49 0 0 chr2R 15547104 15547145 -5599563 + AT_rich Low_complexity Low_complexity 1 41 0 2 703 23 0 0 0 chr2R 15548472 15548495 -5598213 + AT_rich Low_complexity Low_complexity 1 23 0 2 703 23 33 0 0 chr2R 15551220 15551250 -5595458 + AT_rich Low_complexity Low_complexity 1 30 0 2 703 214 330 5 48 chr2R 15553117 15553305 -5593403 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2 703 23 33 0 0 chr2R 15554995 15555025 -5591683 + AT_rich Low_complexity Low_complexity 1 30 0 2 703 233 241 17 0 chr2R 15556658 15556716 -5589992 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 703 213 218 25 37 chr2R 15556822 15556903 -5589805 + (TG)n Simple_repeat Simple_repeat 2 81 0 2 703 549 125 0 0 chr2R 15560580 15560668 -5586040 + (TA)n Simple_repeat Simple_repeat 1 88 0 2 703 23 0 0 0 chr2R 15562079 15562102 -5584606 + AT_rich Low_complexity Low_complexity 1 23 0 2 703 30 45 0 0 chr2R 15569179 15569223 -5577485 + AT_rich Low_complexity Low_complexity 1 44 0 2 703 206 323 0 0 chr2R 15570236 15570298 -5576410 + (CAG)n Simple_repeat Simple_repeat 3 64 0 2 703 21 0 0 0 chr2R 15570893 15570914 -5575794 + AT_rich Low_complexity Low_complexity 1 21 0 2 703 24 0 0 0 chr2R 15571324 15571348 -5575360 + AT_rich Low_complexity Low_complexity 1 24 0 2 703 207 100 0 0 chr2R 15571456 15571486 -5575222 + (TTGG)n Simple_repeat Simple_repeat 4 33 0 2 703 180 0 0 0 chr2R 15572633 15572653 -5574055 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 703 25 0 0 0 chr2R 15573110 15573135 -5573573 + AT_rich Low_complexity Low_complexity 1 25 0 2 703 25 0 0 0 chr2R 15574833 15574858 -5571850 + AT_rich Low_complexity Low_complexity 1 25 0 2 703 21 36 0 0 chr2R 15575055 15575083 -5571625 + AT_rich Low_complexity Low_complexity 1 28 0 2 703 201 74 0 0 chr2R 15578774 15578801 -5567907 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 703 22 0 0 0 chr2R 15580068 15580090 -5566618 + AT_rich Low_complexity Low_complexity 1 22 0 2 703 26 64 0 0 chr2R 15580903 15580950 -5565758 + AT_rich Low_complexity Low_complexity 1 47 0 2 703 32 43 0 0 chr2R 15586925 15586971 -5559737 + AT_rich Low_complexity Low_complexity 1 46 0 2 703 21 0 0 0 chr2R 15587457 15587478 -5559230 + AT_rich Low_complexity Low_complexity 1 21 0 2 703 23 0 0 0 chr2R 15592127 15592150 -5554558 + AT_rich Low_complexity Low_complexity 1 23 0 2 703 23 0 0 0 chr2R 15593073 15593096 -5553612 + AT_rich Low_complexity Low_complexity 1 23 0 2 703 219 69 0 0 chr2R 15593222 15593251 -5553457 + (CAACT)n Simple_repeat Simple_repeat 4 32 0 2 703 21 0 0 0 chr2R 15596173 15596194 -5550514 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 198 103 0 0 chr2R 15603383 15603412 -5543296 + (CGAGT)n Simple_repeat Simple_repeat 2 30 0 2 704 3528 0 0 0 chr2R 15603414 15603813 -5542895 + BLOOD_LTR LTR Gypsy 1 399 0 2 704 56550 0 0 0 chr2R 15603813 15610427 -5536281 + BLOOD_I LTR Gypsy 1 6613 0 2 704 3528 0 0 0 chr2R 15610427 15610826 -5535882 + BLOOD_LTR LTR Gypsy 1 399 0 2 704 21 36 0 0 chr2R 15613869 15613897 -5532811 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 21 0 0 0 chr2R 15614567 15614588 -5532120 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 30 0 0 0 chr2R 15615238 15615268 -5531440 + AT_rich Low_complexity Low_complexity 1 30 0 2 704 221 161 48 0 chr2R 15615268 15615371 -5531337 + (TA)n Simple_repeat Simple_repeat 1 107 0 2 704 31 82 0 0 chr2R 15615388 15615461 -5531247 + AT_rich Low_complexity Low_complexity 1 73 0 2 704 193 0 94 0 chr2R 15615853 15615885 -5530823 + (TTATA)n Simple_repeat Simple_repeat 2 36 0 2 704 1470 76 40 5 chr2R 15615894 15616118 -5530590 - S2_DM DNA Tc1 -1502 233 2 2 704 25 0 0 0 chr2R 15616565 15616590 -5530118 + AT_rich Low_complexity Low_complexity 1 25 0 2 704 1237 15 0 0 chr2R 15617066 15617201 -5529507 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15617425 15617560 -5529148 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15617808 15617943 -5528765 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15618174 15618309 -5528399 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15618547 15618682 -5528026 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15618913 15619048 -5527660 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15619272 15619407 -5527301 - 5S_DM RNA RNA 0 135 1 2 704 200 48 111 0 chr2R 15619610 15619673 -5527035 + (CAGG)n Simple_repeat Simple_repeat 2 71 0 2 704 1258 0 0 0 chr2R 15619674 15619809 -5526899 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15620054 15620189 -5526519 - 5S_DM RNA RNA 0 135 1 2 704 1236 7 0 0 chr2R 15620430 15620565 -5526143 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15620792 15620927 -5525781 - 5S_DM RNA RNA 0 135 1 2 704 1236 7 0 0 chr2R 15621175 15621310 -5525398 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15621541 15621676 -5525032 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15621900 15622035 -5524673 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15622276 15622411 -5524297 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15622645 15622780 -5523928 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15623014 15623149 -5523559 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15623383 15623518 -5523190 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15623752 15623887 -5522821 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15624121 15624256 -5522452 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15624490 15624625 -5522083 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15624859 15624994 -5521714 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15625228 15625363 -5521345 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15625590 15625725 -5520983 - 5S_DM RNA RNA 0 135 1 2 704 1223 15 0 0 chr2R 15625956 15626091 -5520617 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15626322 15626457 -5520251 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15626698 15626833 -5519875 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15627074 15627209 -5519499 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15627440 15627575 -5519133 - 5S_DM RNA RNA 0 135 1 2 704 1236 7 0 0 chr2R 15627809 15627944 -5518764 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15628168 15628303 -5518405 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15628544 15628679 -5518029 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15628910 15629045 -5517663 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15629272 15629407 -5517301 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15629641 15629776 -5516932 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15630007 15630142 -5516566 - 5S_DM RNA RNA 0 135 1 2 704 1186 0 0 56 chr2R 15630380 15630523 -5516185 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15630757 15630892 -5515816 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15631133 15631268 -5515440 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15631499 15631634 -5515074 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15631865 15632000 -5514708 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15632224 15632359 -5514349 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15632600 15632735 -5513973 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15632966 15633101 -5513607 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15633332 15633467 -5513241 - 5S_DM RNA RNA 0 135 1 2 704 1236 7 0 0 chr2R 15633705 15633840 -5512868 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15634078 15634213 -5512495 - 5S_DM RNA RNA 0 135 1 2 704 1193 8 8 0 chr2R 15634447 15634581 -5512127 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15634822 15634957 -5511751 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15635181 15635316 -5511392 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15635547 15635682 -5511026 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15635909 15636044 -5510664 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15636278 15636413 -5510295 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15636647 15636782 -5509926 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15637016 15637151 -5509557 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15637382 15637517 -5509191 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15637755 15637890 -5508818 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15638124 15638259 -5508449 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15638493 15638628 -5508080 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15638862 15638997 -5507711 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15639231 15639366 -5507342 - 5S_DM RNA RNA 0 135 1 2 704 1193 8 8 0 chr2R 15639600 15639734 -5506974 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15639961 15640096 -5506612 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15640320 15640455 -5506253 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15640693 15640828 -5505880 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15641062 15641197 -5505511 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15641431 15641566 -5505142 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15641800 15641935 -5504773 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15642169 15642304 -5504404 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15642538 15642673 -5504035 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15642907 15643042 -5503666 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15643276 15643411 -5503297 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15643645 15643780 -5502928 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15644014 15644149 -5502559 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15644383 15644518 -5502190 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15644759 15644894 -5501814 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15645128 15645263 -5501445 - 5S_DM RNA RNA 0 135 1 2 704 1231 7 0 0 chr2R 15645497 15645632 -5501076 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15645866 15646001 -5500707 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15646239 15646374 -5500334 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15646605 15646740 -5499968 - 5S_DM RNA RNA 0 135 1 2 704 701 193 0 15 chr2R 15646978 15647115 -5499593 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15647346 15647481 -5499227 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15647719 15647854 -5498854 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15648095 15648230 -5498478 - 5S_DM RNA RNA 0 135 1 2 704 1225 15 0 0 chr2R 15648471 15648606 -5498102 - 5S_DM RNA RNA 0 135 1 2 704 1215 15 0 0 chr2R 15648847 15648982 -5497726 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15649206 15649341 -5497367 - 5S_DM RNA RNA 0 135 1 2 704 1237 15 0 0 chr2R 15649572 15649707 -5497001 - 5S_DM RNA RNA 0 135 1 2 704 1148 15 0 62 chr2R 15649931 15650075 -5496633 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15650306 15650441 -5496267 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15650679 15650814 -5495894 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15651048 15651183 -5495525 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15651417 15651552 -5495156 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15651793 15651928 -5494780 - 5S_DM RNA RNA 0 135 1 2 704 1258 0 0 0 chr2R 15652152 15652287 -5494421 - 5S_DM RNA RNA 0 135 1 2 704 1022 74 0 56 chr2R 15652525 15652668 -5494040 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15652913 15653048 -5493660 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15653279 15653414 -5493294 - 5S_DM RNA RNA 0 135 1 2 704 1248 7 0 0 chr2R 15653648 15653783 -5492925 - 5S_DM RNA RNA 0 135 1 2 704 21 36 0 0 chr2R 15655818 15655846 -5490862 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 22 0 0 0 chr2R 15657839 15657861 -5488847 + AT_rich Low_complexity Low_complexity 1 22 0 2 704 22 56 0 0 chr2R 15658396 15658432 -5488276 + AT_rich Low_complexity Low_complexity 1 36 0 2 704 238 220 34 0 chr2R 15660905 15660964 -5485744 + (CATA)n Simple_repeat Simple_repeat 3 63 0 2 704 28 48 0 0 chr2R 15661056 15661098 -5485610 + AT_rich Low_complexity Low_complexity 1 42 0 2 704 204 150 0 24 chr2R 15661146 15661187 -5485521 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 704 26 0 0 0 chr2R 15661685 15661711 -5484997 + AT_rich Low_complexity Low_complexity 1 26 0 2 704 180 0 0 0 chr2R 15663154 15663174 -5483534 + (GCTG)n Simple_repeat Simple_repeat 4 23 0 2 704 30331 2 0 1 chr2R 15664156 15667400 -5479308 + LINEJ1_DM LINE Jockey 1781 5020 0 2 704 21 36 0 0 chr2R 15672443 15672471 -5474237 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 342 129 0 0 chr2R 15675676 15675738 -5470970 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 704 21 0 0 0 chr2R 15681212 15681233 -5465475 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 22 70 0 0 chr2R 15685375 15685418 -5461290 + AT_rich Low_complexity Low_complexity 1 43 0 2 704 30 27 0 0 chr2R 15686529 15686566 -5460142 + AT_rich Low_complexity Low_complexity 1 37 0 2 704 28 0 0 0 chr2R 15688821 15688849 -5457859 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 38 39 0 0 chr2R 15690275 15690327 -5456381 + AT_rich Low_complexity Low_complexity 1 52 0 2 704 207 125 0 0 chr2R 15691999 15692039 -5454669 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 2 704 23 54 0 0 chr2R 15692376 15692413 -5454295 + AT_rich Low_complexity Low_complexity 1 37 0 2 704 21 0 0 0 chr2R 15695277 15695298 -5451410 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 180 163 0 0 chr2R 15695853 15695896 -5450812 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 704 216 0 0 0 chr2R 15697835 15697859 -5448849 + (GAA)n Simple_repeat Simple_repeat 2 25 0 2 704 285 89 0 0 chr2R 15707580 15707625 -5439083 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 704 309 169 0 0 chr2R 15710206 15710265 -5436443 + (TTGG)n Simple_repeat Simple_repeat 4 62 0 2 704 180 135 0 0 chr2R 15711106 15711143 -5435565 + (A)n Simple_repeat Simple_repeat 1 37 0 2 704 23 33 0 0 chr2R 15711995 15712025 -5434683 + AT_rich Low_complexity Low_complexity 1 30 0 2 704 27 29 0 0 chr2R 15713431 15713465 -5433243 + AT_rich Low_complexity Low_complexity 1 34 0 2 704 24 0 0 0 chr2R 15713697 15713721 -5432987 + AT_rich Low_complexity Low_complexity 1 24 0 2 704 300 53 0 0 chr2R 15718648 15718686 -5428022 + (CAG)n Simple_repeat Simple_repeat 1 38 0 2 704 225 200 0 20 chr2R 15722080 15722131 -5424577 + (TATATG)n Simple_repeat Simple_repeat 6 55 0 2 705 219 154 0 0 chr2R 15729345 15729384 -5417324 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 705 25 0 0 0 chr2R 15729386 15729411 -5417297 + AT_rich Low_complexity Low_complexity 1 25 0 2 705 32 26 0 0 chr2R 15731944 15731983 -5414725 + AT_rich Low_complexity Low_complexity 1 39 0 2 705 29 0 0 0 chr2R 15739243 15739272 -5407436 + AT_rich Low_complexity Low_complexity 1 29 0 2 705 217 264 0 19 chr2R 15741383 15741437 -5405271 + (CAA)n Simple_repeat Simple_repeat 3 55 0 2 705 182 128 26 0 chr2R 15743216 15743255 -5403453 + (CATAC)n Simple_repeat Simple_repeat 2 41 0 2 705 27 49 0 0 chr2R 15744122 15744163 -5402545 + AT_rich Low_complexity Low_complexity 1 41 0 2 705 21 0 0 0 chr2R 15745260 15745281 -5401427 + AT_rich Low_complexity Low_complexity 1 21 0 2 705 216 200 0 0 chr2R 15747563 15747608 -5399100 + T-rich Low_complexity Low_complexity 1 45 0 2 705 24 0 0 0 chr2R 15750132 15750156 -5396552 + AT_rich Low_complexity Low_complexity 1 24 0 2 705 32 26 0 0 chr2R 15753093 15753132 -5393576 + AT_rich Low_complexity Low_complexity 1 39 0 2 705 216 0 0 0 chr2R 15755077 15755101 -5391607 + (ACTG)n Simple_repeat Simple_repeat 1 24 0 2 705 213 39 0 0 chr2R 15756555 15756581 -5390127 + (CAAAC)n Simple_repeat Simple_repeat 3 28 0 2 705 23 0 0 0 chr2R 15757015 15757038 -5389670 + AT_rich Low_complexity Low_complexity 1 23 0 2 705 285 128 0 0 chr2R 15758467 15758514 -5388194 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 2 705 21 0 0 0 chr2R 15761441 15761462 -5385246 + AT_rich Low_complexity Low_complexity 1 21 0 2 705 32 0 0 0 chr2R 15769070 15769102 -5377606 + AT_rich Low_complexity Low_complexity 1 32 0 2 705 205 156 0 43 chr2R 15769314 15769361 -5377347 + A-rich Low_complexity Low_complexity 1 45 0 2 705 21 0 0 0 chr2R 15770940 15770961 -5375747 + AT_rich Low_complexity Low_complexity 1 21 0 2 705 28 61 0 0 chr2R 15771311 15771360 -5375348 + AT_rich Low_complexity Low_complexity 1 49 0 2 705 188 184 0 20 chr2R 15773410 15773460 -5373248 + (CAA)n Simple_repeat Simple_repeat 1 49 0 2 705 23 0 0 0 chr2R 15774565 15774588 -5372120 + AT_rich Low_complexity Low_complexity 1 23 0 2 705 21 0 0 0 chr2R 15775233 15775254 -5371454 + AT_rich Low_complexity Low_complexity 1 21 0 2 705 29 0 0 0 chr2R 15780545 15780574 -5366134 + AT_rich Low_complexity Low_complexity 1 29 0 2 705 239 157 39 0 chr2R 15784429 15784480 -5362228 + ROO_I LTR Pao 677 729 -7527 2 705 28 29 0 0 chr2R 15790720 15790755 -5355953 + AT_rich Low_complexity Low_complexity 1 35 0 2 705 3142 22 0 0 chr2R 15802404 15802760 -5343948 - MDG1_LTR LTR Gypsy 0 442 87 2 705 423 100 0 0 chr2R 15802760 15802830 -5343878 + (TTA)n Simple_repeat Simple_repeat 3 72 0 2 705 57166 6 21 2 chr2R 15802846 15809317 -5337391 - MDG1_I LTR Gypsy 0 6596 1 2 705 3142 22 0 0 chr2R 15809317 15809673 -5337035 - MDG1_LTR LTR Gypsy 0 442 87 2 705 423 100 0 0 chr2R 15809673 15809743 -5336965 + (TTA)n Simple_repeat Simple_repeat 3 72 0 2 705 28 0 0 0 chr2R 15811542 15811570 -5335138 + AT_rich Low_complexity Low_complexity 1 28 0 2 705 189 180 0 0 chr2R 15816758 15816808 -5329900 + (ACTG)n Simple_repeat Simple_repeat 1 50 0 2 705 294 115 0 0 chr2R 15822955 15823007 -5323701 + (CAGT)n Simple_repeat Simple_repeat 1 52 0 2 705 23 78 0 0 chr2R 15823984 15824035 -5322673 + AT_rich Low_complexity Low_complexity 1 51 0 2 705 22 0 0 0 chr2R 15824835 15824857 -5321851 + AT_rich Low_complexity Low_complexity 1 22 0 2 705 195 100 0 0 chr2R 15825147 15825177 -5321531 + (CAG)n Simple_repeat Simple_repeat 3 32 0 2 705 21 71 0 0 chr2R 15826244 15826286 -5320422 + AT_rich Low_complexity Low_complexity 1 42 0 2 705 21 0 0 0 chr2R 15827392 15827413 -5319295 + AT_rich Low_complexity Low_complexity 1 21 0 2 705 22 0 0 0 chr2R 15829697 15829719 -5316989 + AT_rich Low_complexity Low_complexity 1 22 0 2 705 29 0 0 0 chr2R 15830092 15830121 -5316587 + AT_rich Low_complexity Low_complexity 1 29 0 2 705 22 0 0 0 chr2R 15830841 15830863 -5315845 + AT_rich Low_complexity Low_complexity 1 22 0 2 705 180 87 20 80 chr2R 15831064 15831114 -5315594 + (CTG)n Simple_repeat Simple_repeat 1 47 0 2 705 33 25 0 0 chr2R 15832677 15832717 -5313991 + AT_rich Low_complexity Low_complexity 1 40 0 2 705 865 208 24 48 chr2R 15834389 15834641 -5312067 - DNAREP1_DM LINE Penelope -261 333 88 2 705 24 53 0 0 chr2R 15835473 15835511 -5311197 + AT_rich Low_complexity Low_complexity 1 38 0 2 705 21 0 0 0 chr2R 15835817 15835838 -5310870 + AT_rich Low_complexity Low_complexity 1 21 0 2 705 24 32 0 0 chr2R 15836532 15836563 -5310145 + AT_rich Low_complexity Low_complexity 1 31 0 2 705 250 98 0 38 chr2R 15838313 15838366 -5308342 + (GCTTG)n Simple_repeat Simple_repeat 3 53 0 2 705 221 246 0 34 chr2R 15839971 15840030 -5306678 + (TTGGGG)n Simple_repeat Simple_repeat 1 57 0 2 705 243 61 0 0 chr2R 15840655 15840688 -5306020 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 2 705 2442 0 0 0 chr2R 15844990 15845266 -5301442 - Copia_LTR LTR Copia 0 276 1 2 705 41767 1 0 0 chr2R 15845266 15849858 -5296850 - Copia_I LTR Copia 0 4593 1 2 705 2442 0 0 0 chr2R 15849858 15850134 -5296574 - Copia_LTR LTR Copia 0 276 1 2 705 201 152 0 0 chr2R 15854550 15854583 -5292125 + (CAGT)n Simple_repeat Simple_repeat 1 33 0 2 705 23 33 0 0 chr2R 15856407 15856437 -5290271 + AT_rich Low_complexity Low_complexity 1 30 0 2 706 29 70 0 0 chr2R 15860642 15860699 -5286009 + AT_rich Low_complexity Low_complexity 1 57 0 2 706 24 32 0 0 chr2R 15863536 15863567 -5283141 + AT_rich Low_complexity Low_complexity 1 31 0 2 706 25 0 0 0 chr2R 15865878 15865903 -5280805 + AT_rich Low_complexity Low_complexity 1 25 0 2 706 32 0 0 0 chr2R 15867788 15867820 -5278888 + AT_rich Low_complexity Low_complexity 1 32 0 2 706 21 36 0 0 chr2R 15872666 15872694 -5274014 + AT_rich Low_complexity Low_complexity 1 28 0 2 706 227 186 0 0 chr2R 15879493 15879536 -5267172 + (TTCGGG)n Simple_repeat Simple_repeat 3 45 0 2 706 21 57 0 0 chr2R 15879898 15879933 -5266775 + AT_rich Low_complexity Low_complexity 1 35 0 2 706 29 0 0 0 chr2R 15880517 15880546 -5266162 + AT_rich Low_complexity Low_complexity 1 29 0 2 706 25 51 0 0 chr2R 15886481 15886520 -5260188 + AT_rich Low_complexity Low_complexity 1 39 0 2 706 213 65 0 0 chr2R 15887338 15887369 -5259339 + (ACTTG)n Simple_repeat Simple_repeat 1 31 0 2 706 22 0 0 0 chr2R 15895076 15895098 -5251610 + AT_rich Low_complexity Low_complexity 1 22 0 2 706 21 0 0 0 chr2R 15898601 15898622 -5248086 + AT_rich Low_complexity Low_complexity 1 21 0 2 706 23 0 0 0 chr2R 15900879 15900902 -5245806 + AT_rich Low_complexity Low_complexity 1 23 0 2 706 198 0 0 0 chr2R 15901906 15901928 -5244780 + (ACTCG)n Simple_repeat Simple_repeat 2 23 0 2 706 378 0 0 0 chr2R 15904403 15904445 -5242263 + (CGGT)n Simple_repeat Simple_repeat 3 44 0 2 706 23 33 0 0 chr2R 15912013 15912043 -5234665 + AT_rich Low_complexity Low_complexity 1 30 0 2 706 21 36 0 0 chr2R 15925696 15925724 -5220984 + AT_rich Low_complexity Low_complexity 1 28 0 2 706 43 35 0 0 chr2R 15929843 15929900 -5216808 + AT_rich Low_complexity Low_complexity 1 57 0 2 706 22 0 0 0 chr2R 15934852 15934874 -5211834 + AT_rich Low_complexity Low_complexity 1 22 0 2 706 26 50 0 0 chr2R 15935150 15935190 -5211518 + AT_rich Low_complexity Low_complexity 1 40 0 2 706 213 39 0 0 chr2R 15935995 15936021 -5210687 + (CGAAA)n Simple_repeat Simple_repeat 3 28 0 2 706 21 0 0 0 chr2R 15938747 15938768 -5207940 + AT_rich Low_complexity Low_complexity 1 21 0 2 706 310 301 21 29 chr2R 15938799 15938939 -5207769 + XDMR Unknown Unknown 2 140 -221 2 706 26 0 0 0 chr2R 15947558 15947584 -5199124 + AT_rich Low_complexity Low_complexity 1 26 0 2 706 39 0 0 0 chr2R 15955856 15955895 -5190813 + AT_rich Low_complexity Low_complexity 1 39 0 2 706 3420 27 16 3 chr2R 15956803 15957284 -5189424 - NOMAD_LTR LTR Gypsy 0 518 1 2 706 7203 3 0 0 chr2R 15957284 15958055 -5188653 - NOMAD_I LTR Gypsy 0 6572 5802 2 706 7826 2 3 0 chr2R 15958041 15958895 -5187813 - NOMAD_I LTR Gypsy -5715 857 1 2 706 3420 27 16 3 chr2R 15958895 15959376 -5187332 - NOMAD_LTR LTR Gypsy 0 518 1 2 706 208 206 0 0 chr2R 15962371 15962405 -5184303 + (TTCGGG)n Simple_repeat Simple_repeat 2 35 0 2 706 21 57 0 0 chr2R 15962952 15962987 -5183721 + AT_rich Low_complexity Low_complexity 1 35 0 2 706 22 35 0 0 chr2R 15970844 15970873 -5175835 + AT_rich Low_complexity Low_complexity 1 29 0 2 706 26 0 0 0 chr2R 15972135 15972161 -5174547 + AT_rich Low_complexity Low_complexity 1 26 0 2 706 202 132 0 26 chr2R 15972626 15972665 -5174043 + (AATTG)n Simple_repeat Simple_repeat 2 39 0 2 706 236 91 0 0 chr2R 15975573 15975606 -5171102 - PROTOP_B DNA P -617 536 504 2 706 23 0 0 0 chr2R 15977123 15977146 -5169562 + AT_rich Low_complexity Low_complexity 1 23 0 2 706 197 65 0 31 chr2R 15977348 15977380 -5169328 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 2 706 210 208 0 20 chr2R 15977693 15977742 -5168966 + (CAA)n Simple_repeat Simple_repeat 1 48 0 2 706 21 89 0 0 chr2R 15982031 15982087 -5164621 + AT_rich Low_complexity Low_complexity 1 56 0 2 706 243 61 0 0 chr2R 15985905 15985938 -5160770 + (GCTG)n Simple_repeat Simple_repeat 3 35 0 2 706 22 0 0 0 chr2R 15987702 15987724 -5158984 + AT_rich Low_complexity Low_complexity 1 22 0 2 706 189 178 0 0 chr2R 15987932 15987977 -5158731 + (CAA)n Simple_repeat Simple_repeat 3 47 0 2 707 192 40 0 0 chr2R 15991631 15991656 -5155052 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 707 183 100 0 0 chr2R 15992448 15992478 -5154230 + (A)n Simple_repeat Simple_repeat 1 30 0 2 707 29 0 0 0 chr2R 15994946 15994975 -5151733 + AT_rich Low_complexity Low_complexity 1 29 0 2 707 21 0 0 0 chr2R 15995490 15995511 -5151197 + AT_rich Low_complexity Low_complexity 1 21 0 2 707 189 74 0 0 chr2R 15997034 15997061 -5149647 + (CAG)n Simple_repeat Simple_repeat 1 27 0 2 707 233 259 0 0 chr2R 15997147 15997201 -5149507 + (CAG)n Simple_repeat Simple_repeat 3 56 0 2 707 278 174 43 0 chr2R 15998018 15998087 -5148621 + ROO_I LTR Pao 654 725 -7531 2 707 22 0 0 0 chr2R 15999114 15999136 -5147572 + AT_rich Low_complexity Low_complexity 1 22 0 2 707 234 194 0 0 chr2R 16003255 16003317 -5143391 + (CAG)n Simple_repeat Simple_repeat 3 64 0 2 707 254 95 24 0 chr2R 16003454 16003496 -5143212 + (CAG)n Simple_repeat Simple_repeat 3 45 0 2 707 189 0 0 0 chr2R 16004065 16004086 -5142622 + (CTAAA)n Simple_repeat Simple_repeat 3 23 0 2 707 29 70 0 0 chr2R 16004303 16004360 -5142348 + AT_rich Low_complexity Low_complexity 1 57 0 2 707 242 0 61 0 chr2R 16007348 16007381 -5139327 + (TAGG)n Simple_repeat Simple_repeat 3 37 0 2 707 214 222 19 0 chr2R 16008383 16008437 -5138271 + (TTG)n Simple_repeat Simple_repeat 2 56 0 2 707 201 39 0 0 chr2R 16008614 16008640 -5138068 + (CTG)n Simple_repeat Simple_repeat 1 26 0 2 707 21 0 0 0 chr2R 16010550 16010571 -5136137 + AT_rich Low_complexity Low_complexity 1 21 0 2 707 22 35 0 0 chr2R 16011239 16011268 -5135440 + AT_rich Low_complexity Low_complexity 1 29 0 2 707 180 152 0 0 chr2R 16011811 16011844 -5134864 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 2 707 21 0 0 0 chr2R 16015429 16015450 -5131258 + AT_rich Low_complexity Low_complexity 1 21 0 2 707 201 39 0 0 chr2R 16020656 16020682 -5126026 + (CTG)n Simple_repeat Simple_repeat 3 28 0 2 707 23 0 0 0 chr2R 16023769 16023792 -5122916 + AT_rich Low_complexity Low_complexity 1 23 0 2 707 32 0 0 0 chr2R 16026364 16026396 -5120312 + AT_rich Low_complexity Low_complexity 1 32 0 2 707 210 37 0 0 chr2R 16032422 16032449 -5114259 + (GTATG)n Simple_repeat Simple_repeat 4 30 0 2 707 207 196 0 56 chr2R 16032945 16032999 -5113709 + (CATATA)n Simple_repeat Simple_repeat 1 51 0 2 707 21 0 0 0 chr2R 16034850 16034871 -5111837 + AT_rich Low_complexity Low_complexity 1 21 0 2 707 306 87 0 0 chr2R 16036966 16037012 -5109696 + (CAT)n Simple_repeat Simple_repeat 1 46 0 2 707 200 227 45 0 chr2R 16037112 16037178 -5109530 + (CTG)n Simple_repeat Simple_repeat 3 71 0 2 707 208 283 0 0 chr2R 16037262 16037315 -5109393 + (CAG)n Simple_repeat Simple_repeat 3 55 0 2 707 22 0 0 0 chr2R 16038418 16038440 -5108268 + AT_rich Low_complexity Low_complexity 1 22 0 2 707 212 212 0 15 chr2R 16039664 16039731 -5106977 + (TTG)n Simple_repeat Simple_repeat 3 68 0 2 707 201 160 38 57 chr2R 16039845 16039898 -5106810 + (TTCCG)n Simple_repeat Simple_repeat 2 53 0 2 707 204 67 0 0 chr2R 16044772 16044802 -5101906 + (CCTG)n Simple_repeat Simple_repeat 2 31 0 2 707 227 224 0 17 chr2R 16045064 16045123 -5101585 + (CAT)n Simple_repeat Simple_repeat 1 58 0 2 707 252 86 0 0 chr2R 16046429 16046464 -5100244 + (CAAAG)n Simple_repeat Simple_repeat 2 36 0 2 707 264 100 0 0 chr2R 16048174 16048214 -5098494 + (CGATG)n Simple_repeat Simple_repeat 3 42 0 2 707 211 194 0 0 chr2R 16049988 16050024 -5096684 + (TCCGG)n Simple_repeat Simple_repeat 2 37 0 2 707 244 208 0 0 chr2R 16054211 16054264 -5092444 + ROO_I LTR Pao 691 743 -7513 2 707 471 73 0 0 chr2R 16055234 16055302 -5091406 + (CAG)n Simple_repeat Simple_repeat 1 68 0 2 707 22 70 0 0 chr2R 16055618 16055661 -5091047 + AT_rich Low_complexity Low_complexity 1 43 0 2 707 243 346 0 0 chr2R 16056007 16056114 -5090594 + (GCTG)n Simple_repeat Simple_repeat 2 108 0 2 707 237 180 0 0 chr2R 16056786 16056836 -5089872 + (ACTG)n Simple_repeat Simple_repeat 1 50 0 2 707 21 0 0 0 chr2R 16058470 16058491 -5088217 + AT_rich Low_complexity Low_complexity 1 21 0 2 707 21 0 0 0 chr2R 16060661 16060682 -5086026 + AT_rich Low_complexity Low_complexity 1 21 0 2 707 183 42 0 0 chr2R 16061202 16061226 -5085482 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 2 707 26 0 0 0 chr2R 16062219 16062245 -5084463 + AT_rich Low_complexity Low_complexity 1 26 0 2 707 22 56 0 0 chr2R 16062531 16062567 -5084141 + AT_rich Low_complexity Low_complexity 1 36 0 2 707 243 146 0 0 chr2R 16063557 16063598 -5083110 + (GCTG)n Simple_repeat Simple_repeat 3 43 0 2 707 222 118 0 0 chr2R 16064374 16064408 -5082300 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 707 27 0 0 0 chr2R 16067833 16067860 -5078848 + AT_rich Low_complexity Low_complexity 1 27 0 2 707 23 0 0 0 chr2R 16067876 16067899 -5078809 + AT_rich Low_complexity Low_complexity 1 23 0 2 707 183 146 0 0 chr2R 16069296 16069337 -5077371 + (ACTG)n Simple_repeat Simple_repeat 2 42 0 2 707 22 70 0 0 chr2R 16071433 16071476 -5075232 + AT_rich Low_complexity Low_complexity 1 43 0 2 707 180 0 0 0 chr2R 16072111 16072131 -5074577 + (CAG)n Simple_repeat Simple_repeat 2 21 0 2 707 35 0 0 0 chr2R 16072147 16072182 -5074526 + AT_rich Low_complexity Low_complexity 1 35 0 2 707 243 230 0 0 chr2R 16077448 16077535 -5069173 + (CAG)n Simple_repeat Simple_repeat 1 87 0 2 707 270 0 0 0 chr2R 16077593 16077623 -5069085 + (CACTC)n Simple_repeat Simple_repeat 5 34 0 2 707 291 122 0 0 chr2R 16079017 16079066 -5067642 + (CTG)n Simple_repeat Simple_repeat 1 49 0 2 707 288 77 0 0 chr2R 16079130 16079169 -5067539 + (GCTTG)n Simple_repeat Simple_repeat 5 43 0 2 707 204 158 0 0 chr2R 16083156 16083194 -5063514 + (CAGT)n Simple_repeat Simple_repeat 1 38 0 2 707 26 50 0 0 chr2R 16085498 16085538 -5061170 + AT_rich Low_complexity Low_complexity 1 40 0 2 707 309 131 0 0 chr2R 16087081 16087142 -5059566 + (GGATG)n Simple_repeat Simple_repeat 5 65 0 2 707 202 229 0 0 chr2R 16088066 16088114 -5058594 + A-rich Low_complexity Low_complexity 1 48 0 2 707 186 133 0 0 chr2R 16090159 16090189 -5056519 + (CGGA)n Simple_repeat Simple_repeat 4 33 0 2 707 202 234 0 0 chr2R 16093635 16093682 -5053026 + A-rich Low_complexity Low_complexity 1 47 0 2 707 258 105 0 0 chr2R 16094710 16094748 -5051960 + (CTG)n Simple_repeat Simple_repeat 1 38 0 2 707 288 77 0 0 chr2R 16095223 16095262 -5051446 + (ATG)n Simple_repeat Simple_repeat 2 40 0 2 707 240 175 16 0 chr2R 16095341 16095404 -5051304 + ROO_I LTR Pao 679 742 -7514 2 707 33 56 0 0 chr2R 16099082 16099136 -5047572 + AT_rich Low_complexity Low_complexity 1 54 0 2 707 192 135 0 0 chr2R 16102206 16102243 -5044465 + (A)n Simple_repeat Simple_repeat 1 37 0 2 707 207 314 0 0 chr2R 16103104 16103155 -5043553 + (CAG)n Simple_repeat Simple_repeat 3 53 0 2 707 212 179 0 0 chr2R 16103255 16103294 -5043414 + T-rich Low_complexity Low_complexity 1 39 0 2 707 31 0 0 0 chr2R 16104026 16104057 -5042651 + AT_rich Low_complexity Low_complexity 1 31 0 2 707 22 35 0 0 chr2R 16105649 16105678 -5041030 + AT_rich Low_complexity Low_complexity 1 29 0 2 707 252 77 0 0 chr2R 16107084 16107123 -5039585 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 707 180 125 0 0 chr2R 16108404 16108436 -5038272 + (T)n Simple_repeat Simple_repeat 1 32 0 2 707 25 31 0 0 chr2R 16109953 16109985 -5036723 + AT_rich Low_complexity Low_complexity 1 32 0 2 707 318 50 0 0 chr2R 16112480 16112520 -5034188 + (TGGA)n Simple_repeat Simple_repeat 1 40 0 2 707 22 35 0 0 chr2R 16114542 16114571 -5032137 + AT_rich Low_complexity Low_complexity 1 29 0 2 707 24 32 0 0 chr2R 16117109 16117140 -5029568 + AT_rich Low_complexity Low_complexity 1 31 0 2 707 25 31 0 0 chr2R 16117920 16117952 -5028756 + AT_rich Low_complexity Low_complexity 1 32 0 2 708 224 323 0 0 chr2R 16122682 16122778 -5023930 + (CACCAT)n Simple_repeat Simple_repeat 3 98 0 2 708 27 73 0 0 chr2R 16123376 16123431 -5023277 + AT_rich Low_complexity Low_complexity 1 55 0 2 708 34 24 0 0 chr2R 16125954 16125995 -5020713 + AT_rich Low_complexity Low_complexity 1 41 0 2 708 200 125 0 24 chr2R 16140365 16140406 -5006302 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2 708 24 0 0 0 chr2R 16142472 16142496 -5004212 + AT_rich Low_complexity Low_complexity 1 24 0 2 708 26 0 0 0 chr2R 16144135 16144161 -5002547 + AT_rich Low_complexity Low_complexity 1 26 0 2 708 28 29 0 0 chr2R 16145032 16145067 -5001641 + AT_rich Low_complexity Low_complexity 1 35 0 2 708 23 0 0 0 chr2R 16148094 16148117 -4998591 + AT_rich Low_complexity Low_complexity 1 23 0 2 708 23 54 0 0 chr2R 16150478 16150515 -4996193 + AT_rich Low_complexity Low_complexity 1 37 0 2 708 25 75 0 0 chr2R 16151234 16151287 -4995421 + AT_rich Low_complexity Low_complexity 1 53 0 2 708 27 0 0 0 chr2R 16158071 16158098 -4988610 + AT_rich Low_complexity Low_complexity 1 27 0 2 708 22 0 0 0 chr2R 16168186 16168208 -4978500 + AT_rich Low_complexity Low_complexity 1 22 0 2 708 218 95 0 23 chr2R 16169359 16169402 -4977306 + (CAATA)n Simple_repeat Simple_repeat 1 42 0 2 708 21 0 0 0 chr2R 16175908 16175929 -4970779 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 28 102 0 0 chr2R 16180500 16180598 -4966110 + AT_rich Low_complexity Low_complexity 1 98 0 2 708 303 71 0 0 chr2R 16186836 16186878 -4959830 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 2 708 23 0 0 0 chr2R 16189346 16189369 -4957339 + AT_rich Low_complexity Low_complexity 1 23 0 2 708 225 0 0 0 chr2R 16189933 16189958 -4956750 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2 708 231 196 59 0 chr2R 16190322 16190373 -4956335 + ROO_I LTR Pao 670 723 -7533 2 708 30 0 0 0 chr2R 16191167 16191197 -4955511 + AT_rich Low_complexity Low_complexity 1 30 0 2 708 32 43 0 0 chr2R 16193247 16193293 -4953415 + AT_rich Low_complexity Low_complexity 1 46 0 2 708 186 43 0 0 chr2R 16198503 16198526 -4948182 + (TCC)n Simple_repeat Simple_repeat 2 24 0 2 708 24 32 0 0 chr2R 16200219 16200250 -4946458 + AT_rich Low_complexity Low_complexity 1 31 0 2 708 22 35 0 0 chr2R 16204729 16204758 -4941950 + AT_rich Low_complexity Low_complexity 1 29 0 2 708 21 0 0 0 chr2R 16206525 16206546 -4940162 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 25 0 0 0 chr2R 16214676 16214701 -4932007 + AT_rich Low_complexity Low_complexity 1 25 0 2 708 23 0 0 0 chr2R 16221926 16221949 -4924759 + AT_rich Low_complexity Low_complexity 1 23 0 2 708 315 71 0 0 chr2R 16222403 16222445 -4924263 + (ACTCG)n Simple_repeat Simple_repeat 3 44 0 2 708 21 0 0 0 chr2R 16226094 16226115 -4920593 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 25 31 0 0 chr2R 16226432 16226464 -4920244 + AT_rich Low_complexity Low_complexity 1 32 0 2 708 22 0 0 0 chr2R 16226517 16226539 -4920169 + AT_rich Low_complexity Low_complexity 1 22 0 2 708 30 69 0 0 chr2R 16226563 16226621 -4920087 + AT_rich Low_complexity Low_complexity 1 58 0 2 708 286 212 140 10 chr2R 16226903 16227003 -4919705 - ROO_I LTR Pao -7452 804 692 2 708 254 132 38 0 chr2R 16227205 16227258 -4919450 - ROO_I LTR Pao -7562 694 640 2 708 203 229 21 0 chr2R 16228414 16228462 -4918246 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 708 218 196 0 0 chr2R 16237128 16237174 -4909534 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 708 22 70 0 0 chr2R 16237437 16237480 -4909228 + AT_rich Low_complexity Low_complexity 1 43 0 2 708 27 0 0 0 chr2R 16238187 16238214 -4908494 + AT_rich Low_complexity Low_complexity 1 27 0 2 708 21 0 0 0 chr2R 16240616 16240637 -4906071 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 32 43 0 0 chr2R 16241623 16241669 -4905039 + AT_rich Low_complexity Low_complexity 1 46 0 2 708 26 82 0 0 chr2R 16242823 16242884 -4903824 + AT_rich Low_complexity Low_complexity 1 61 0 2 708 339 106 45 0 chr2R 16244983 16245049 -4901659 + ROO_I LTR Pao 671 739 -7517 2 708 266 87 0 21 chr2R 16246463 16246510 -4900198 + (CGAAT)n Simple_repeat Simple_repeat 2 47 0 2 708 439 116 43 0 chr2R 16248643 16248712 -4897996 - DNAREP1_DM LINE Penelope 0 594 523 2 708 1105 128 30 6 chr2R 16248698 16248929 -4897779 - DNAREP1_DM LINE Penelope -226 368 1 2 708 233 133 0 51 chr2R 16250648 16250727 -4895981 + (ACTG)n Simple_repeat Simple_repeat 4 78 0 2 708 208 246 0 0 chr2R 16251411 16251468 -4895240 + A-rich Low_complexity Low_complexity 1 57 0 2 709 4006 2 0 0 chr2R 16256071 16256499 -4890209 + ROO_LTR LTR Pao 1 428 0 2 709 75028 1 2 2 chr2R 16256499 16264748 -4881960 + ROO_I LTR Pao 1 8256 0 2 709 4006 2 0 0 chr2R 16264748 16265176 -4881532 + ROO_LTR LTR Pao 1 428 0 2 709 22 56 0 0 chr2R 16266724 16266760 -4879948 + AT_rich Low_complexity Low_complexity 1 36 0 2 709 330 80 0 0 chr2R 16268073 16268123 -4878585 + (ATGGTG)n Simple_repeat Simple_repeat 6 55 0 2 709 237 33 0 0 chr2R 16269599 16269629 -4877079 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 709 216 0 0 0 chr2R 16269885 16269909 -4876799 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 709 23 0 0 0 chr2R 16272009 16272032 -4874676 + AT_rich Low_complexity Low_complexity 1 23 0 2 709 225 0 0 0 chr2R 16273340 16273365 -4873343 + (T)n Simple_repeat Simple_repeat 1 25 0 2 709 27 0 0 0 chr2R 16274403 16274430 -4872278 + AT_rich Low_complexity Low_complexity 1 27 0 2 709 252 0 0 0 chr2R 16277179 16277207 -4869501 + (CATA)n Simple_repeat Simple_repeat 2 29 0 2 709 198 71 0 0 chr2R 16278816 16278844 -4867864 + (CACCG)n Simple_repeat Simple_repeat 5 32 0 2 709 22 0 0 0 chr2R 16279697 16279719 -4866989 + AT_rich Low_complexity Low_complexity 1 22 0 2 709 183 42 0 0 chr2R 16280024 16280048 -4866660 + (TAAAAA)n Simple_repeat Simple_repeat 1 24 0 2 709 186 118 0 0 chr2R 16283240 16283274 -4863434 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 2 709 264 30 0 0 chr2R 16284092 16284125 -4862583 + (CAG)n Simple_repeat Simple_repeat 1 33 0 2 709 269 109 22 0 chr2R 16284274 16284320 -4862388 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 709 198 0 0 0 chr2R 16285125 16285147 -4861561 + (CAT)n Simple_repeat Simple_repeat 1 22 0 2 709 228 35 0 0 chr2R 16285453 16285482 -4861226 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 709 24 0 0 0 chr2R 16289900 16289924 -4856784 + AT_rich Low_complexity Low_complexity 1 24 0 2 709 207 0 0 0 chr2R 16290572 16290595 -4856113 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 709 22 35 0 0 chr2R 16296412 16296441 -4850267 + AT_rich Low_complexity Low_complexity 1 29 0 2 709 227 208 0 0 chr2R 16299988 16300036 -4846672 + T-rich Low_complexity Low_complexity 1 48 0 2 709 238 187 13 26 chr2R 16307259 16307336 -4839372 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 2 709 22 0 0 0 chr2R 16308330 16308352 -4838356 + AT_rich Low_complexity Low_complexity 1 22 0 2 709 27 0 0 0 chr2R 16310201 16310228 -4836480 + AT_rich Low_complexity Low_complexity 1 27 0 2 709 21 57 0 0 chr2R 16311171 16311206 -4835502 + AT_rich Low_complexity Low_complexity 1 35 0 2 709 189 154 0 0 chr2R 16312439 16312478 -4834230 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 709 276 200 0 41 chr2R 16314439 16314512 -4832196 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 709 236 229 33 0 chr2R 16316736 16316797 -4829911 + T-rich Low_complexity Low_complexity 3 65 0 2 709 219 242 0 15 chr2R 16316837 16316904 -4829804 + CT-rich Low_complexity Low_complexity 2 67 0 2 709 21 0 0 0 chr2R 16317444 16317465 -4829243 + AT_rich Low_complexity Low_complexity 1 21 0 2 709 240 229 0 32 chr2R 16317803 16317866 -4828842 + (CGTG)n Simple_repeat Simple_repeat 1 61 0 2 709 315 122 0 0 chr2R 16318640 16318689 -4828019 + (CAGC)n Simple_repeat Simple_repeat 3 51 0 2 709 216 143 17 51 chr2R 16319281 16319340 -4827368 + T-rich Low_complexity Low_complexity 3 59 0 2 709 345 100 0 0 chr2R 16319888 16319938 -4826770 + (CAGTT)n Simple_repeat Simple_repeat 1 50 0 2 709 23 0 0 0 chr2R 16322126 16322149 -4824559 + AT_rich Low_complexity Low_complexity 1 23 0 2 709 198 103 0 0 chr2R 16324259 16324288 -4822420 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 709 23 54 0 0 chr2R 16325524 16325561 -4821147 + AT_rich Low_complexity Low_complexity 1 37 0 2 709 23 0 0 0 chr2R 16328238 16328261 -4818447 + AT_rich Low_complexity Low_complexity 1 23 0 2 709 198 0 0 0 chr2R 16330263 16330285 -4816423 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 709 195 42 0 0 chr2R 16335174 16335198 -4811510 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 709 180 0 0 0 chr2R 16336798 16336818 -4809890 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 709 183 139 0 0 chr2R 16339008 16339044 -4807664 + (CAACC)n Simple_repeat Simple_repeat 4 39 0 2 709 222 156 0 0 chr2R 16339827 16339872 -4806836 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 709 23 0 0 0 chr2R 16340760 16340783 -4805925 + AT_rich Low_complexity Low_complexity 1 23 0 2 709 234 0 0 0 chr2R 16341776 16341802 -4804906 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 709 22 0 0 0 chr2R 16342102 16342124 -4804584 + AT_rich Low_complexity Low_complexity 1 22 0 2 709 22 0 0 0 chr2R 16342317 16342339 -4804369 + AT_rich Low_complexity Low_complexity 1 22 0 2 709 22 35 0 0 chr2R 16342924 16342953 -4803755 + AT_rich Low_complexity Low_complexity 1 29 0 2 709 21 0 0 0 chr2R 16345805 16345826 -4800882 + AT_rich Low_complexity Low_complexity 1 21 0 2 709 186 43 0 0 chr2R 16346143 16346166 -4800542 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 709 22 56 0 0 chr2R 16346668 16346704 -4800004 + AT_rich Low_complexity Low_complexity 1 36 0 2 709 234 0 0 0 chr2R 16347229 16347255 -4799453 + (T)n Simple_repeat Simple_repeat 1 26 0 2 709 21 0 0 0 chr2R 16349166 16349187 -4797521 + AT_rich Low_complexity Low_complexity 1 21 0 2 709 233 135 0 19 chr2R 16351809 16351862 -4794846 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 709 30 0 0 0 chr2R 16354629 16354659 -4792049 + AT_rich Low_complexity Low_complexity 1 30 0 2 709 210 194 27 27 chr2R 16356542 16356616 -4790092 + (TTTA)n Simple_repeat Simple_repeat 4 77 0 2 709 222 37 0 0 chr2R 16357162 16357189 -4789519 + (A)n Simple_repeat Simple_repeat 1 27 0 2 709 24 67 0 0 chr2R 16358177 16358222 -4788486 + AT_rich Low_complexity Low_complexity 1 45 0 2 709 21 0 0 0 chr2R 16358274 16358295 -4788413 + AT_rich Low_complexity Low_complexity 1 21 0 2 709 321 253 0 0 chr2R 16359210 16359293 -4787415 + (CGG)n Simple_repeat Simple_repeat 3 85 0 2 709 297 0 0 0 chr2R 16364866 16364899 -4781809 + (CAG)n Simple_repeat Simple_repeat 2 34 0 2 709 24 0 0 0 chr2R 16366420 16366444 -4780264 + AT_rich Low_complexity Low_complexity 1 24 0 2 709 235 265 0 14 chr2R 16366841 16366910 -4779798 + (CAG)n Simple_repeat Simple_repeat 1 68 0 2 709 207 0 0 0 chr2R 16369253 16369276 -4777432 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 709 27 29 0 0 chr2R 16370450 16370484 -4776224 + AT_rich Low_complexity Low_complexity 1 34 0 2 709 207 0 0 0 chr2R 16371192 16371215 -4775493 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 709 201 39 0 0 chr2R 16371872 16371898 -4774810 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 709 225 114 0 43 chr2R 16372550 16372596 -4774112 - ROO_I LTR Pao -7561 695 652 2 709 341 102 17 0 chr2R 16372824 16372883 -4773825 + (CAG)n Simple_repeat Simple_repeat 3 62 0 2 709 216 0 0 0 chr2R 16373364 16373388 -4773320 + (T)n Simple_repeat Simple_repeat 1 24 0 2 709 43 20 0 0 chr2R 16373413 16373463 -4773245 + AT_rich Low_complexity Low_complexity 1 50 0 2 709 212 154 0 0 chr2R 16379215 16379254 -4767454 + (CTG)n Simple_repeat Simple_repeat 1 39 0 2 709 282 56 0 0 chr2R 16379736 16379772 -4766936 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 709 219 36 0 0 chr2R 16380120 16380148 -4766560 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 709 219 224 0 20 chr2R 16382309 16382359 -4764349 + (CAG)n Simple_repeat Simple_repeat 2 50 0 2 709 246 62 0 0 chr2R 16382474 16382506 -4764202 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 709 264 30 0 0 chr2R 16382597 16382630 -4764078 + (CTG)n Simple_repeat Simple_repeat 3 35 0 2 709 295 79 0 0 chr2R 16383507 16383545 -4763163 - TRANSIB2 DNA Transib -275 2569 2532 2 710 22 35 0 0 chr2R 16384453 16384482 -4762226 + AT_rich Low_complexity Low_complexity 1 29 0 2 710 24 0 0 0 chr2R 16384620 16384644 -4762064 + AT_rich Low_complexity Low_complexity 1 24 0 2 710 25 65 0 0 chr2R 16386528 16386574 -4760134 + AT_rich Low_complexity Low_complexity 1 46 0 2 710 293 244 0 0 chr2R 16386941 16387023 -4759685 + ROO_I LTR Pao 656 737 -7519 2 710 216 103 0 25 chr2R 16387056 16387096 -4759612 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 710 33 25 0 0 chr2R 16388663 16388703 -4758005 + AT_rich Low_complexity Low_complexity 1 40 0 2 710 234 0 0 0 chr2R 16390568 16390594 -4756114 + (A)n Simple_repeat Simple_repeat 1 26 0 2 710 198 0 0 0 chr2R 16393509 16393531 -4753177 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 710 21 36 0 0 chr2R 16394510 16394538 -4752170 + AT_rich Low_complexity Low_complexity 1 28 0 2 710 22 0 0 0 chr2R 16397388 16397410 -4749298 + AT_rich Low_complexity Low_complexity 1 22 0 2 710 210 164 0 0 chr2R 16398516 16398571 -4748137 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 710 345 93 0 0 chr2R 16398721 16398775 -4747933 + (TC)n Simple_repeat Simple_repeat 2 55 0 2 710 22 35 0 0 chr2R 16401377 16401406 -4745302 + AT_rich Low_complexity Low_complexity 1 29 0 2 710 186 43 0 0 chr2R 16403723 16403746 -4742962 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 2 710 211 200 0 0 chr2R 16405247 16405292 -4741416 + (CTG)n Simple_repeat Simple_repeat 1 45 0 2 710 258 160 0 0 chr2R 16409687 16409737 -4736971 + (ATGGTG)n Simple_repeat Simple_repeat 6 55 0 2 710 198 208 0 0 chr2R 16412273 16412326 -4734382 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 2 710 24 67 0 0 chr2R 16415106 16415151 -4731557 + AT_rich Low_complexity Low_complexity 1 45 0 2 710 204 158 0 0 chr2R 16418411 16418449 -4728259 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 710 30 27 0 0 chr2R 16420507 16420544 -4726164 + AT_rich Low_complexity Low_complexity 1 37 0 2 710 373 102 318 0 chr2R 16423581 16423669 -4723039 + DNAREP1_DM LINE Penelope 212 327 -267 2 710 383 96 384 0 chr2R 16425837 16425910 -4720798 + DNAREP1_DM LINE Penelope 320 420 -174 2 710 298 87 333 42 chr2R 16425927 16425999 -4720709 + DNAREP1_DM LINE Penelope 502 594 0 2 710 21 57 0 0 chr2R 16427333 16427368 -4719340 + AT_rich Low_complexity Low_complexity 1 35 0 2 710 29 70 0 0 chr2R 16428257 16428314 -4718394 + AT_rich Low_complexity Low_complexity 1 57 0 2 710 26 30 0 0 chr2R 16430253 16430286 -4716422 + AT_rich Low_complexity Low_complexity 1 33 0 2 710 1401 266 117 33 chr2R 16431989 16432888 -4713820 + SAR_DM Satellite Satellite 252 1225 -247 2 710 27 29 0 0 chr2R 16441756 16441790 -4704918 + AT_rich Low_complexity Low_complexity 1 34 0 2 710 240 122 0 0 chr2R 16450664 16450705 -4696003 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 710 208 255 0 0 chr2R 16463787 16463834 -4682874 + (CTA)n Simple_repeat Simple_repeat 2 48 0 2 710 210 118 0 0 chr2R 16465655 16465689 -4681019 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 2 710 35 54 0 0 chr2R 16467660 16467716 -4678992 + AT_rich Low_complexity Low_complexity 1 56 0 2 710 222 274 0 0 chr2R 16475678 16475740 -4670968 + T-rich Low_complexity Low_complexity 2 63 0 2 710 28 0 0 0 chr2R 16476450 16476478 -4670230 + AT_rich Low_complexity Low_complexity 1 28 0 2 710 23 33 0 0 chr2R 16477397 16477427 -4669281 + AT_rich Low_complexity Low_complexity 1 30 0 2 710 186 43 0 0 chr2R 16478729 16478752 -4667956 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 710 24 0 0 0 chr2R 16479431 16479455 -4667253 + AT_rich Low_complexity Low_complexity 1 24 0 2 710 261 57 0 0 chr2R 16480128 16480163 -4666545 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 710 189 0 0 0 chr2R 16480984 16481005 -4665703 + (GGA)n Simple_repeat Simple_repeat 1 21 0 2 710 201 162 0 0 chr2R 16483640 16483677 -4663031 + A-rich Low_complexity Low_complexity 1 37 0 2 710 212 0 36 0 chr2R 16484195 16484223 -4662485 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 710 210 37 0 0 chr2R 16484291 16484318 -4662390 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 710 215 173 19 0 chr2R 16484369 16484421 -4662287 + (CGAAT)n Simple_repeat Simple_repeat 2 54 0 2 710 181 109 43 0 chr2R 16484672 16484718 -4661990 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 710 204 269 19 0 chr2R 16484866 16484918 -4661790 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 2 710 245 130 0 53 chr2R 16484960 16485017 -4661691 + (CCCG)n Simple_repeat Simple_repeat 1 54 0 2 710 558 43 0 0 chr2R 16487769 16487838 -4658870 + (T)n Simple_repeat Simple_repeat 1 69 0 2 710 21 0 0 0 chr2R 16493757 16493778 -4652930 + AT_rich Low_complexity Low_complexity 1 21 0 2 710 221 210 16 16 chr2R 16493994 16494057 -4652651 + (CAA)n Simple_repeat Simple_repeat 2 64 0 2 710 303 28 0 0 chr2R 16498447 16498483 -4648225 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 710 208 154 0 25 chr2R 16498700 16498740 -4647968 + (CCA)n Simple_repeat Simple_repeat 1 39 0 2 710 180 0 0 0 chr2R 16500014 16500034 -4646674 + (A)n Simple_repeat Simple_repeat 1 20 0 2 710 25 31 0 0 chr2R 16501623 16501655 -4645053 + AT_rich Low_complexity Low_complexity 1 32 0 2 710 22 56 0 0 chr2R 16504569 16504605 -4642103 + AT_rich Low_complexity Low_complexity 1 36 0 2 710 192 163 0 0 chr2R 16505312 16505355 -4641353 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 710 30 27 0 0 chr2R 16505990 16506027 -4640681 + AT_rich Low_complexity Low_complexity 1 37 0 2 711 231 194 0 43 chr2R 16516531 16516601 -4630107 + (CTG)n Simple_repeat Simple_repeat 3 69 0 2 711 222 37 0 0 chr2R 16518482 16518509 -4628199 + (CGATG)n Simple_repeat Simple_repeat 1 27 0 2 711 192 40 0 0 chr2R 16519436 16519461 -4627247 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2 711 29 47 0 0 chr2R 16528241 16528284 -4618424 + AT_rich Low_complexity Low_complexity 1 43 0 2 711 26 0 0 0 chr2R 16528318 16528344 -4618364 + AT_rich Low_complexity Low_complexity 1 26 0 2 711 46 19 0 0 chr2R 16531394 16531447 -4615261 + AT_rich Low_complexity Low_complexity 1 53 0 2 711 216 158 0 0 chr2R 16533771 16533809 -4612899 + A-rich Low_complexity Low_complexity 1 38 0 2 711 189 74 0 0 chr2R 16534842 16534869 -4611839 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 711 21 36 0 0 chr2R 16535229 16535257 -4611451 + AT_rich Low_complexity Low_complexity 1 28 0 2 711 234 0 0 0 chr2R 16535464 16535490 -4611218 + (CTG)n Simple_repeat Simple_repeat 1 26 0 2 711 22 56 0 0 chr2R 16537438 16537474 -4609234 + AT_rich Low_complexity Low_complexity 1 36 0 2 711 24 0 0 0 chr2R 16538163 16538187 -4608521 + AT_rich Low_complexity Low_complexity 1 24 0 2 711 26 30 0 0 chr2R 16538313 16538346 -4608362 + AT_rich Low_complexity Low_complexity 1 33 0 2 711 22 56 0 0 chr2R 16541961 16541997 -4604711 + AT_rich Low_complexity Low_complexity 1 36 0 2 711 24 32 0 0 chr2R 16545567 16545598 -4601110 + AT_rich Low_complexity Low_complexity 1 31 0 2 711 23 33 0 0 chr2R 16545693 16545723 -4600985 + AT_rich Low_complexity Low_complexity 1 30 0 2 711 259 321 12 12 chr2R 16547812 16547897 -4598811 + (CAG)n Simple_repeat Simple_repeat 3 87 0 2 711 189 0 0 0 chr2R 16549538 16549559 -4597149 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 2 711 31 0 0 0 chr2R 16564261 16564292 -4582416 + AT_rich Low_complexity Low_complexity 1 31 0 2 711 26 30 0 0 chr2R 16564878 16564911 -4581797 + AT_rich Low_complexity Low_complexity 1 33 0 2 711 202 179 18 18 chr2R 16573040 16573097 -4573611 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 711 261 0 0 0 chr2R 16574603 16574632 -4572076 + (TAA)n Simple_repeat Simple_repeat 3 31 0 2 711 216 0 0 0 chr2R 16575220 16575244 -4571464 + (TATG)n Simple_repeat Simple_repeat 1 24 0 2 711 29 28 0 0 chr2R 16576540 16576576 -4570132 + AT_rich Low_complexity Low_complexity 1 36 0 2 711 261 0 0 0 chr2R 16577067 16577096 -4569612 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2 711 209 132 26 0 chr2R 16577407 16577445 -4569263 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 711 192 125 0 0 chr2R 16577696 16577728 -4568980 + (CATTC)n Simple_repeat Simple_repeat 1 32 0 2 711 33 66 0 0 chr2R 16577980 16578041 -4568667 + AT_rich Low_complexity Low_complexity 1 61 0 2 711 185 108 27 0 chr2R 16583608 16583645 -4563063 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 2 711 192 135 0 0 chr2R 16585281 16585318 -4561390 + (A)n Simple_repeat Simple_repeat 1 37 0 2 711 23 0 0 0 chr2R 16585543 16585566 -4561142 + AT_rich Low_complexity Low_complexity 1 23 0 2 711 21 0 0 0 chr2R 16585710 16585731 -4560977 + AT_rich Low_complexity Low_complexity 1 21 0 2 711 237 118 38 38 chr2R 16586795 16586848 -4559860 + (TTTAA)n Simple_repeat Simple_repeat 3 55 0 2 711 21 57 0 0 chr2R 16587330 16587365 -4559343 + AT_rich Low_complexity Low_complexity 1 35 0 2 711 28 0 0 0 chr2R 16588794 16588822 -4557886 + AT_rich Low_complexity Low_complexity 1 28 0 2 711 183 80 0 0 chr2R 16589027 16589052 -4557656 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 711 231 114 0 0 chr2R 16590976 16591011 -4555697 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 2 711 22 0 0 0 chr2R 16592102 16592124 -4554584 + AT_rich Low_complexity Low_complexity 1 22 0 2 711 186 43 0 0 chr2R 16592842 16592865 -4553843 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 711 23 0 0 0 chr2R 16592874 16592897 -4553811 + AT_rich Low_complexity Low_complexity 1 23 0 2 711 198 0 0 0 chr2R 16596349 16596371 -4550337 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 2 711 200 114 0 28 chr2R 16597896 16597932 -4548776 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 711 219 139 0 0 chr2R 16598998 16599034 -4547674 + (T)n Simple_repeat Simple_repeat 1 36 0 2 711 24 53 0 0 chr2R 16599262 16599300 -4547408 + AT_rich Low_complexity Low_complexity 1 38 0 2 711 231 36 0 0 chr2R 16607170 16607198 -4539510 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 711 233 213 0 0 chr2R 16611421 16611468 -4535240 + CT-rich Low_complexity Low_complexity 1 47 0 2 711 36 62 0 0 chr2R 16611669 16611733 -4534975 + AT_rich Low_complexity Low_complexity 1 64 0 2 711 212 258 21 0 chr2R 16612111 16612208 -4534500 + (CAAAC)n Simple_repeat Simple_repeat 4 102 0 2 711 195 42 0 0 chr2R 16612329 16612353 -4534355 + (T)n Simple_repeat Simple_repeat 1 24 0 2 711 180 0 0 0 chr2R 16613458 16613478 -4533230 + (CCG)n Simple_repeat Simple_repeat 3 22 0 2 711 22 0 0 0 chr2R 16613959 16613981 -4532727 + AT_rich Low_complexity Low_complexity 1 22 0 2 711 342 67 0 0 chr2R 16615275 16615320 -4531388 + (CAT)n Simple_repeat Simple_repeat 1 45 0 2 711 28 0 0 0 chr2R 16617016 16617044 -4529664 + AT_rich Low_complexity Low_complexity 1 28 0 2 711 23 54 0 0 chr2R 16617296 16617333 -4529375 + AT_rich Low_complexity Low_complexity 1 37 0 2 711 200 217 0 0 chr2R 16621414 16621460 -4525248 + A-rich Low_complexity Low_complexity 1 46 0 2 711 22 0 0 0 chr2R 16625985 16626007 -4520701 + AT_rich Low_complexity Low_complexity 1 22 0 2 711 43253 2 0 0 chr2R 16627012 16631704 -4515004 + FW_DM LINE Jockey 1 4692 0 2 711 180 152 0 0 chr2R 16633140 16633173 -4513535 + (TTA)n Simple_repeat Simple_repeat 1 33 0 2 711 21 0 0 0 chr2R 16634007 16634028 -4512680 + AT_rich Low_complexity Low_complexity 1 21 0 2 711 21 71 0 0 chr2R 16634629 16634671 -4512037 + AT_rich Low_complexity Low_complexity 1 42 0 2 711 200 254 0 0 chr2R 16636048 16636107 -4510601 + (CAG)n Simple_repeat Simple_repeat 3 61 0 2 711 200 130 22 0 chr2R 16636195 16636241 -4510467 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 711 250 107 18 18 chr2R 16637190 16637247 -4509461 + (CAAAAA)n Simple_repeat Simple_repeat 2 58 0 2 711 24 0 0 0 chr2R 16637667 16637691 -4509017 + AT_rich Low_complexity Low_complexity 1 24 0 2 711 226 394 0 0 chr2R 16640566 16640665 -4506043 + (TGG)n Simple_repeat Simple_repeat 3 101 0 2 711 220 204 0 0 chr2R 16642708 16642752 -4503956 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 711 235 220 0 0 chr2R 16643528 16643578 -4503130 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 711 240 122 0 0 chr2R 16644782 16644823 -4501885 + (GTATG)n Simple_repeat Simple_repeat 4 44 0 2 712 307 325 0 0 chr2R 16646999 16647082 -4499626 + (TCG)n Simple_repeat Simple_repeat 3 85 0 2 712 234 62 0 0 chr2R 16647690 16647722 -4498986 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 712 25 0 0 0 chr2R 16651834 16651859 -4494849 + AT_rich Low_complexity Low_complexity 1 25 0 2 712 208 339 0 0 chr2R 16653774 16653836 -4492872 + (CAG)n Simple_repeat Simple_repeat 3 64 0 2 712 23 0 0 0 chr2R 16656361 16656384 -4490324 + AT_rich Low_complexity Low_complexity 1 23 0 2 712 26 30 0 0 chr2R 16664177 16664210 -4482498 + AT_rich Low_complexity Low_complexity 1 33 0 2 712 248 313 0 7 chr2R 16664692 16664840 -4481868 + (TTGG)n Simple_repeat Simple_repeat 4 150 0 2 712 27 0 0 0 chr2R 16665711 16665738 -4480970 + AT_rich Low_complexity Low_complexity 1 27 0 2 712 23 33 0 0 chr2R 16670492 16670522 -4476186 + AT_rich Low_complexity Low_complexity 1 30 0 2 712 43282 1 0 0 chr2R 16670859 16675551 -4471157 - FW_DM LINE Jockey 0 4692 1 2 712 205 178 0 0 chr2R 16676524 16676569 -4470139 + CT-rich Low_complexity Low_complexity 3 47 0 2 712 328 154 13 59 chr2R 16680957 16681109 -4465599 + (CCA)n Simple_repeat Simple_repeat 2 146 0 2 712 21 36 0 0 chr2R 16681227 16681255 -4465453 + AT_rich Low_complexity Low_complexity 1 28 0 2 712 180 125 0 0 chr2R 16682660 16682692 -4464016 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2 712 221 167 0 0 chr2R 16683336 16683378 -4463330 + T-rich Low_complexity Low_complexity 1 42 0 2 712 230 125 21 0 chr2R 16684266 16684314 -4462394 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 712 22 56 0 0 chr2R 16684674 16684710 -4461998 + AT_rich Low_complexity Low_complexity 1 36 0 2 712 21 0 0 0 chr2R 16686649 16686670 -4460038 + AT_rich Low_complexity Low_complexity 1 21 0 2 712 27 0 0 0 chr2R 16697841 16697868 -4448840 + AT_rich Low_complexity Low_complexity 1 27 0 2 712 31 0 0 0 chr2R 16700923 16700954 -4445754 + AT_rich Low_complexity Low_complexity 1 31 0 2 712 200 264 0 0 chr2R 16701555 16701608 -4445100 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 712 201 176 0 0 chr2R 16702370 16702404 -4444304 + T-rich Low_complexity Low_complexity 1 34 0 2 712 201 143 0 0 chr2R 16703812 16703847 -4442861 + (CAG)n Simple_repeat Simple_repeat 3 37 0 2 712 186 43 0 0 chr2R 16704711 16704734 -4441974 + (A)n Simple_repeat Simple_repeat 1 23 0 2 712 24 0 0 0 chr2R 16706234 16706258 -4440450 + AT_rich Low_complexity Low_complexity 1 24 0 2 712 192 111 0 0 chr2R 16709211 16709247 -4437461 + (A)n Simple_repeat Simple_repeat 1 36 0 2 712 214 196 0 21 chr2R 16710332 16710379 -4436329 + (TATG)n Simple_repeat Simple_repeat 4 49 0 2 712 224 208 0 0 chr2R 16717971 16718019 -4428689 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 712 212 234 15 30 chr2R 16717998 16718064 -4428644 + (TGAG)n Simple_repeat Simple_repeat 4 68 0 2 712 219 200 20 0 chr2R 16719155 16719205 -4427503 + (TTG)n Simple_repeat Simple_repeat 1 51 0 2 712 22 35 0 0 chr2R 16721625 16721654 -4425054 + AT_rich Low_complexity Low_complexity 1 29 0 2 712 228 214 0 0 chr2R 16727729 16727771 -4418937 + (CTG)n Simple_repeat Simple_repeat 3 44 0 2 712 243 103 0 0 chr2R 16728484 16728523 -4418185 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 712 21 36 0 0 chr2R 16730975 16731003 -4415705 + AT_rich Low_complexity Low_complexity 1 28 0 2 712 26 0 0 0 chr2R 16731483 16731509 -4415199 + AT_rich Low_complexity Low_complexity 1 26 0 2 712 21 36 0 0 chr2R 16732217 16732245 -4414463 + AT_rich Low_complexity Low_complexity 1 28 0 2 712 35 41 0 0 chr2R 16732670 16732719 -4413989 + AT_rich Low_complexity Low_complexity 1 49 0 2 712 183 250 0 0 chr2R 16734560 16734628 -4412080 + (TTCA)n Simple_repeat Simple_repeat 3 70 0 2 712 195 42 0 0 chr2R 16742261 16742285 -4404423 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 712 22 35 0 0 chr2R 16744803 16744832 -4401876 + AT_rich Low_complexity Low_complexity 1 29 0 2 712 227 178 0 0 chr2R 16749885 16749930 -4396778 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 712 194 164 0 18 chr2R 16752705 16752761 -4393947 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 712 249 146 0 0 chr2R 16755374 16755422 -4391286 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 712 23 0 0 0 chr2R 16756167 16756190 -4390518 + AT_rich Low_complexity Low_complexity 1 23 0 2 712 29 47 0 0 chr2R 16756446 16756489 -4390219 + AT_rich Low_complexity Low_complexity 1 43 0 2 712 27 49 0 0 chr2R 16756632 16756673 -4390035 + AT_rich Low_complexity Low_complexity 1 41 0 2 712 270 81 0 0 chr2R 16761049 16761086 -4385622 + (CATCC)n Simple_repeat Simple_repeat 4 40 0 2 712 240 122 0 0 chr2R 16763379 16763420 -4383288 + (T)n Simple_repeat Simple_repeat 1 41 0 2 712 209 250 0 0 chr2R 16767238 16767282 -4379426 + G-rich Low_complexity Low_complexity 2 45 0 2 712 200 260 0 0 chr2R 16767489 16767539 -4379169 + (CCGAA)n Simple_repeat Simple_repeat 4 53 0 2 712 186 71 0 0 chr2R 16767846 16767874 -4378834 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 712 210 71 0 0 chr2R 16769000 16769028 -4377680 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 712 21 0 0 0 chr2R 16769970 16769991 -4376717 + AT_rich Low_complexity Low_complexity 1 21 0 2 712 242 73 0 24 chr2R 16771097 16771139 -4375569 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 2 712 216 0 0 0 chr2R 16771656 16771680 -4375028 + (TTACG)n Simple_repeat Simple_repeat 3 26 0 2 712 245 300 9 9 chr2R 16772160 16772271 -4374437 + (CTG)n Simple_repeat Simple_repeat 2 112 0 2 712 198 71 0 0 chr2R 16776096 16776124 -4370584 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 712 261 0 0 0 chr2R 16776257 16776286 -4370422 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 712 276 30 0 0 chr2R 16776651 16776684 -4370024 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 713 203 265 0 0 chr2R 16778380 16778429 -4368279 + (TTG)n Simple_repeat Simple_repeat 1 49 0 2 713 189 121 0 0 chr2R 16779462 16779495 -4367213 + (T)n Simple_repeat Simple_repeat 1 33 0 2 713 25 0 0 0 chr2R 16781134 16781159 -4365549 + AT_rich Low_complexity Low_complexity 1 25 0 2 713 201 211 0 0 chr2R 16782326 16782378 -4364330 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 713 228 143 0 0 chr2R 16783916 16783958 -4362750 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 713 240 163 0 0 chr2R 16783996 16784039 -4362669 + (TTG)n Simple_repeat Simple_repeat 2 44 0 2 713 22 35 0 0 chr2R 16787160 16787189 -4359519 + AT_rich Low_complexity Low_complexity 1 29 0 2 713 285 51 0 0 chr2R 16787874 16787913 -4358795 + (GCATG)n Simple_repeat Simple_repeat 5 43 0 2 713 230 194 0 14 chr2R 16790489 16790562 -4356146 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 713 25 0 0 0 chr2R 16791963 16791988 -4354720 + AT_rich Low_complexity Low_complexity 1 25 0 2 713 192 125 0 0 chr2R 16793887 16793919 -4352789 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 713 21 36 0 0 chr2R 16794083 16794111 -4352597 + AT_rich Low_complexity Low_complexity 1 28 0 2 713 267 79 0 0 chr2R 16794929 16794967 -4351741 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 713 182 67 0 82 chr2R 16798925 16798974 -4347734 + (GGATG)n Simple_repeat Simple_repeat 2 46 0 2 713 212 241 0 0 chr2R 16800580 16800638 -4346070 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 713 23 33 0 0 chr2R 16800960 16800990 -4345718 + AT_rich Low_complexity Low_complexity 1 30 0 2 713 192 77 0 0 chr2R 16801252 16801278 -4345430 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 713 208 241 0 0 chr2R 16801383 16801437 -4345271 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 713 266 352 0 0 chr2R 16801520 16801628 -4345080 + CT-rich Low_complexity Low_complexity 1 108 0 2 713 348 133 0 0 chr2R 16802577 16802637 -4344071 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 713 258 95 0 0 chr2R 16803775 16803817 -4342891 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 713 204 67 0 0 chr2R 16806430 16806460 -4340248 + (A)n Simple_repeat Simple_repeat 1 30 0 2 713 216 0 0 0 chr2R 16807449 16807473 -4339235 + (GA)n Simple_repeat Simple_repeat 1 24 0 2 713 282 208 0 0 chr2R 16810820 16810892 -4335816 + ROO_I LTR Pao 653 724 -7532 2 713 180 125 0 0 chr2R 16814531 16814563 -4332145 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 713 220 214 18 0 chr2R 16818797 16818853 -4327855 + CT-rich Low_complexity Low_complexity 6 62 0 2 713 200 154 0 19 chr2R 16820611 16820664 -4326044 + GA-rich Low_complexity Low_complexity 1 52 0 2 713 212 326 0 15 chr2R 16822783 16822917 -4323791 + (TG)n Simple_repeat Simple_repeat 1 132 0 2 713 65 35 0 0 chr2R 16825517 16825603 -4321105 + AT_rich Low_complexity Low_complexity 1 86 0 2 713 25 31 0 0 chr2R 16829603 16829635 -4317073 + AT_rich Low_complexity Low_complexity 1 32 0 2 713 30 69 0 0 chr2R 16829815 16829873 -4316835 + AT_rich Low_complexity Low_complexity 1 58 0 2 713 256 103 35 0 chr2R 16829901 16829959 -4316749 + (TTA)n Simple_repeat Simple_repeat 3 62 0 2 713 21 0 0 0 chr2R 16831896 16831917 -4314791 + AT_rich Low_complexity Low_complexity 1 21 0 2 713 37 62 0 0 chr2R 16833879 16833944 -4312764 + AT_rich Low_complexity Low_complexity 1 65 0 2 713 264 59 0 0 chr2R 16835935 16835969 -4310739 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 713 26 0 0 0 chr2R 16837006 16837032 -4309676 + AT_rich Low_complexity Low_complexity 1 26 0 2 713 21 0 0 0 chr2R 16838857 16838878 -4307830 + AT_rich Low_complexity Low_complexity 1 21 0 2 713 224 174 0 21 chr2R 16840067 16840114 -4306594 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 713 222 160 0 0 chr2R 16840487 16840537 -4306171 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 713 334 230 16 81 chr2R 16846160 16846283 -4300425 - ROO_I LTR Pao -7498 758 644 2 713 183 42 0 0 chr2R 16848744 16848768 -4297940 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 713 30 59 0 0 chr2R 16849343 16849394 -4297314 + AT_rich Low_complexity Low_complexity 1 51 0 2 713 222 91 0 0 chr2R 16851337 16851370 -4295338 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 713 208 229 0 0 chr2R 16852119 16852167 -4294541 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 713 249 33 0 0 chr2R 16854058 16854088 -4292620 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 713 186 71 0 0 chr2R 16857526 16857554 -4289154 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 713 28 29 0 0 chr2R 16861201 16861236 -4285472 + AT_rich Low_complexity Low_complexity 1 35 0 2 713 21 71 0 0 chr2R 16864198 16864240 -4282468 + AT_rich Low_complexity Low_complexity 1 42 0 2 713 27 29 0 0 chr2R 16866333 16866367 -4280341 + AT_rich Low_complexity Low_complexity 1 34 0 2 713 22 0 0 0 chr2R 16876407 16876429 -4270279 + AT_rich Low_complexity Low_complexity 1 22 0 2 713 713 46 53 0 chr2R 16882023 16882154 -4264554 + (TA)n Simple_repeat Simple_repeat 2 139 0 2 713 183 139 0 0 chr2R 16884612 16884648 -4262060 + (GA)n Simple_repeat Simple_repeat 2 37 0 2 713 221 212 15 29 chr2R 16884696 16884764 -4261944 + (TTG)n Simple_repeat Simple_repeat 3 69 0 2 713 210 298 0 0 chr2R 16885235 16885282 -4261426 + polypyrimidine Low_complexity Low_complexity 1 47 0 2 713 299 277 0 0 chr2R 16889509 16889628 -4257080 + (CAG)n Simple_repeat Simple_repeat 1 119 0 2 713 205 368 0 0 chr2R 16889805 16889892 -4256816 + (CAG)n Simple_repeat Simple_repeat 1 87 0 2 713 189 0 0 0 chr2R 16890328 16890349 -4256359 + (CAG)n Simple_repeat Simple_repeat 3 23 0 2 713 200 211 19 0 chr2R 16891913 16891965 -4254743 + (CAG)n Simple_repeat Simple_repeat 2 54 0 2 713 243 88 0 0 chr2R 16892225 16892259 -4254449 + (CAG)n Simple_repeat Simple_repeat 3 36 0 2 713 382 163 21 21 chr2R 16892371 16892465 -4254243 + ROO_I LTR Pao 651 744 -7512 2 713 327 104 0 0 chr2R 16892757 16892805 -4253903 + (CAG)n Simple_repeat Simple_repeat 1 48 0 2 713 269 211 0 40 chr2R 16892954 16893028 -4253680 + (CAG)n Simple_repeat Simple_repeat 3 73 0 2 713 265 125 18 18 chr2R 16893102 16893159 -4253549 + (CAG)n Simple_repeat Simple_repeat 1 57 0 2 713 214 143 20 20 chr2R 16893297 16893347 -4253361 + (CAG)n Simple_repeat Simple_repeat 1 50 0 2 713 26 30 0 0 chr2R 16894184 16894217 -4252491 + AT_rich Low_complexity Low_complexity 1 33 0 2 713 202 132 19 19 chr2R 16895030 16895084 -4251624 + A-rich Low_complexity Low_complexity 2 55 0 2 713 228 213 10 78 chr2R 16895126 16895228 -4251480 + A-rich Low_complexity Low_complexity 6 100 0 2 713 205 286 0 0 chr2R 16898757 16898820 -4247888 + (TCG)n Simple_repeat Simple_repeat 2 64 0 2 713 38 0 0 0 chr2R 16905907 16905945 -4240763 + AT_rich Low_complexity Low_complexity 1 38 0 2 714 22 0 0 0 chr2R 16909221 16909243 -4237465 + AT_rich Low_complexity Low_complexity 1 22 0 2 714 210 118 0 0 chr2R 16910200 16910234 -4236474 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 714 21 0 0 0 chr2R 16911826 16911847 -4234861 + AT_rich Low_complexity Low_complexity 1 21 0 2 714 23 68 0 0 chr2R 16915223 16915267 -4231441 + AT_rich Low_complexity Low_complexity 1 44 0 2 714 186 133 0 0 chr2R 16916346 16916376 -4230332 + (TATG)n Simple_repeat Simple_repeat 2 31 0 2 714 25 0 0 0 chr2R 16924126 16924151 -4222557 + AT_rich Low_complexity Low_complexity 1 25 0 2 714 257 217 29 14 chr2R 16924327 16924397 -4222311 + GA-rich Low_complexity Low_complexity 2 72 0 2 714 210 228 35 0 chr2R 16927192 16927249 -4219459 + (CTTTA)n Simple_repeat Simple_repeat 1 59 0 2 714 30 45 0 0 chr2R 16928863 16928907 -4217801 + AT_rich Low_complexity Low_complexity 1 44 0 2 714 230 254 0 17 chr2R 16936878 16936938 -4209770 + (CATA)n Simple_repeat Simple_repeat 1 59 0 2 714 24 0 0 0 chr2R 16937163 16937187 -4209521 + AT_rich Low_complexity Low_complexity 1 24 0 2 714 202 146 24 0 chr2R 16937401 16937442 -4209266 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 714 193 151 19 19 chr2R 16938128 16938182 -4208526 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 714 22 0 0 0 chr2R 16942588 16942610 -4204098 + AT_rich Low_complexity Low_complexity 1 22 0 2 714 21 57 0 0 chr2R 16947285 16947320 -4199388 + AT_rich Low_complexity Low_complexity 1 35 0 2 714 180 0 0 0 chr2R 16955172 16955192 -4191516 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 714 204 143 0 0 chr2R 16976196 16976238 -4170470 + (CTG)n Simple_repeat Simple_repeat 1 42 0 2 714 345 314 0 7 chr2R 16983634 16983775 -4162933 + (CCG)n Simple_repeat Simple_repeat 2 141 0 2 714 21 36 0 0 chr2R 16984216 16984244 -4162464 + AT_rich Low_complexity Low_complexity 1 28 0 2 714 206 155 0 40 chr2R 16984608 16984682 -4162026 + CT-rich Low_complexity Low_complexity 1 71 0 2 714 246 62 0 0 chr2R 16989231 16989263 -4157445 + (GA)n Simple_repeat Simple_repeat 1 32 0 2 714 23 0 0 0 chr2R 16991098 16991121 -4155587 + AT_rich Low_complexity Low_complexity 1 23 0 2 714 22 0 0 0 chr2R 16996010 16996032 -4150676 + AT_rich Low_complexity Low_complexity 1 22 0 2 714 213 216 0 0 chr2R 16996904 16996941 -4149767 + (CTCA)n Simple_repeat Simple_repeat 3 39 0 2 714 197 86 57 0 chr2R 16997011 16997046 -4149662 + (CCCA)n Simple_repeat Simple_repeat 2 38 0 2 714 24 0 0 0 chr2R 17002133 17002157 -4144551 + AT_rich Low_complexity Low_complexity 1 24 0 2 714 198 0 0 0 chr2R 17004419 17004441 -4142267 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 714 253 167 33 0 chr2R 17004609 17004669 -4142039 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 714 21 0 0 0 chr2R 17004981 17005002 -4141706 + AT_rich Low_complexity Low_complexity 1 21 0 2 714 224 220 0 0 chr2R 17005803 17005862 -4140846 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 2 714 21 0 0 0 chr2R 17008224 17008245 -4138463 + AT_rich Low_complexity Low_complexity 1 21 0 2 714 22 56 0 0 chr2R 17008405 17008441 -4138267 + AT_rich Low_complexity Low_complexity 1 36 0 2 714 238 246 0 0 chr2R 17019907 17019964 -4126744 + (CTG)n Simple_repeat Simple_repeat 2 58 0 2 714 25 0 0 0 chr2R 17021598 17021623 -4125085 + AT_rich Low_complexity Low_complexity 1 25 0 2 714 22 0 0 0 chr2R 17025415 17025437 -4121271 + AT_rich Low_complexity Low_complexity 1 22 0 2 714 309 51 0 0 chr2R 17026335 17026374 -4120334 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 714 214 103 25 25 chr2R 17028388 17028428 -4118280 + GA-rich Low_complexity Low_complexity 4 43 0 2 714 22 35 0 0 chr2R 17033616 17033645 -4113063 + AT_rich Low_complexity Low_complexity 1 29 0 2 714 222 37 0 0 chr2R 17036815 17036842 -4109866 + (CTG)n Simple_repeat Simple_repeat 1 27 0 2 714 402 162 0 54 chr2R 17037099 17037210 -4109498 - ROO_I LTR Pao -7513 743 639 2 714 301 162 0 39 chr2R 17037177 17037254 -4109454 - ROO_I LTR Pao -7513 743 670 2 714 3790 7 0 0 chr2R 17038672 17039081 -4107627 + NOMAD_LTR LTR Gypsy 110 518 0 2 89 7914 5 1 0 chr2R 17039081 17039946 -4106762 + NOMAD_I LTR Gypsy 1 866 -5706 2 715 518 128 11 0 chr2R 17039918 17040012 -4106696 + NOMAD_I LTR Gypsy 5509 5603 -969 2 715 7996 0 0 2 chr2R 17039986 17040847 -4105861 + NOMAD_I LTR Gypsy 5714 6572 0 2 715 3763 5 0 0 chr2R 17040847 17041252 -4105456 + NOMAD_LTR LTR Gypsy 114 518 0 2 715 366 322 13 7 chr2R 17042396 17042546 -4104162 + (CTG)n Simple_repeat Simple_repeat 2 152 0 2 715 207 167 0 0 chr2R 17046134 17046170 -4100538 + (CAG)n Simple_repeat Simple_repeat 3 38 0 2 715 38 22 0 0 chr2R 17050720 17050765 -4095943 + AT_rich Low_complexity Low_complexity 1 45 0 2 715 185 108 27 0 chr2R 17052944 17052981 -4093727 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 2 715 24 67 0 0 chr2R 17053876 17053921 -4092787 + AT_rich Low_complexity Low_complexity 1 45 0 2 715 23 54 0 0 chr2R 17056242 17056279 -4090429 + AT_rich Low_complexity Low_complexity 1 37 0 2 715 22 0 0 0 chr2R 17061778 17061800 -4084908 + AT_rich Low_complexity Low_complexity 1 22 0 2 715 207 0 0 0 chr2R 17062743 17062766 -4083942 + (TC)n Simple_repeat Simple_repeat 1 23 0 2 715 205 186 0 0 chr2R 17063889 17063932 -4082776 + A-rich Low_complexity Low_complexity 1 43 0 2 715 213 65 0 0 chr2R 17064406 17064437 -4082271 + (A)n Simple_repeat Simple_repeat 1 31 0 2 715 189 0 0 0 chr2R 17068546 17068567 -4078141 + (CAAGT)n Simple_repeat Simple_repeat 3 23 0 2 715 189 74 0 0 chr2R 17068590 17068617 -4078091 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 715 26 50 0 0 chr2R 17069271 17069311 -4077397 + AT_rich Low_complexity Low_complexity 1 40 0 2 715 21 57 0 0 chr2R 17070074 17070109 -4076599 + AT_rich Low_complexity Low_complexity 1 35 0 2 715 25 108 0 0 chr2R 17070430 17070532 -4076176 + AT_rich Low_complexity Low_complexity 1 102 0 2 715 269 284 0 0 chr2R 17079872 17079981 -4066727 + A-rich Low_complexity Low_complexity 1 109 0 2 715 21 36 0 0 chr2R 17081203 17081231 -4065477 + AT_rich Low_complexity Low_complexity 1 28 0 2 715 186 71 0 0 chr2R 17082036 17082064 -4064644 + (T)n Simple_repeat Simple_repeat 1 28 0 2 715 21 0 0 0 chr2R 17082961 17082982 -4063726 + AT_rich Low_complexity Low_complexity 1 21 0 2 715 28 29 0 0 chr2R 17083328 17083363 -4063345 + AT_rich Low_complexity Low_complexity 1 35 0 2 715 258 81 0 0 chr2R 17086641 17086678 -4060030 + (TTAG)n Simple_repeat Simple_repeat 4 40 0 2 715 22 0 0 0 chr2R 17087274 17087296 -4059412 + AT_rich Low_complexity Low_complexity 1 22 0 2 715 22 0 0 0 chr2R 17087788 17087810 -4058898 + AT_rich Low_complexity Low_complexity 1 22 0 2 715 22 0 0 0 chr2R 17088462 17088484 -4058224 + AT_rich Low_complexity Low_complexity 1 22 0 2 715 219 125 0 0 chr2R 17088790 17088830 -4057878 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 715 222 62 0 0 chr2R 17090837 17090869 -4055839 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 715 210 204 20 0 chr2R 17091233 17091282 -4055426 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 715 28 48 0 0 chr2R 17093391 17093433 -4053275 + AT_rich Low_complexity Low_complexity 1 42 0 2 715 22 0 0 0 chr2R 17093595 17093617 -4053091 + AT_rich Low_complexity Low_complexity 1 22 0 2 715 185 83 0 27 chr2R 17093781 17093818 -4052890 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 715 186 71 0 0 chr2R 17094000 17094028 -4052680 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 715 35 83 0 0 chr2R 17094092 17094176 -4052532 + AT_rich Low_complexity Low_complexity 1 84 0 2 715 195 173 0 0 chr2R 17094547 17094599 -4052109 + (CAG)n Simple_repeat Simple_repeat 2 53 0 2 715 222 37 0 0 chr2R 17096525 17096552 -4050156 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 715 192 77 0 0 chr2R 17096627 17096653 -4050055 + (CTG)n Simple_repeat Simple_repeat 2 27 0 2 715 183 204 0 0 chr2R 17097109 17097163 -4049545 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 715 31 0 0 0 chr2R 17098329 17098360 -4048348 + AT_rich Low_complexity Low_complexity 1 31 0 2 715 185 139 23 0 chr2R 17102523 17102566 -4044142 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 2 715 279 193 0 0 chr2R 17102851 17102908 -4043800 + DNAREP1_DM LINE Penelope 525 581 -13 2 715 219 69 0 0 chr2R 17105628 17105657 -4041051 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 715 21 36 0 0 chr2R 17105834 17105862 -4040846 + AT_rich Low_complexity Low_complexity 1 28 0 2 715 185 0 0 39 chr2R 17106829 17106855 -4039853 + (TTATA)n Simple_repeat Simple_repeat 5 29 0 2 715 429 99 0 62 chr2R 17108313 17108410 -4038298 + (CTG)n Simple_repeat Simple_repeat 2 92 0 2 715 300 154 0 25 chr2R 17108893 17108973 -4037735 - ROO_I LTR Pao -7536 720 643 2 715 350 182 0 29 chr2R 17108999 17109101 -4037607 - ROO_I LTR Pao -7519 737 639 2 715 182 37 0 36 chr2R 17110122 17110150 -4036558 + (GGATG)n Simple_repeat Simple_repeat 4 30 0 2 715 192 125 0 0 chr2R 17113500 17113532 -4033176 + (CAGC)n Simple_repeat Simple_repeat 1 32 0 2 715 203 158 0 0 chr2R 17115292 17115330 -4031378 + CT-rich Low_complexity Low_complexity 3 40 0 2 715 228 156 0 22 chr2R 17115620 17115666 -4031042 + (TTCGG)n Simple_repeat Simple_repeat 4 48 0 2 715 21 0 0 0 chr2R 17116924 17116945 -4029763 + AT_rich Low_complexity Low_complexity 1 21 0 2 715 207 157 0 0 chr2R 17117029 17117080 -4029628 + A-rich Low_complexity Low_complexity 1 51 0 2 715 218 214 0 18 chr2R 17117663 17117720 -4028988 + (TTCTG)n Simple_repeat Simple_repeat 3 58 0 2 715 183 80 0 0 chr2R 17117739 17117764 -4028944 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 715 180 0 0 0 chr2R 17118325 17118345 -4028363 + (GA)n Simple_repeat Simple_repeat 2 21 0 2 715 204 97 0 0 chr2R 17122268 17122299 -4024409 + (CGAAT)n Simple_repeat Simple_repeat 1 31 0 2 715 235 200 11 66 chr2R 17124444 17124535 -4022173 + (TG)n Simple_repeat Simple_repeat 1 86 0 2 715 195 42 0 0 chr2R 17125270 17125294 -4021414 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2 715 357 178 0 88 chr2R 17127089 17127169 -4019539 + DNAREP1_DM LINE Penelope 522 594 0 2 715 207 0 0 0 chr2R 17129850 17129873 -4016835 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 715 279 154 0 0 chr2R 17132642 17132707 -4014001 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 715 219 133 0 0 chr2R 17134621 17134666 -4012042 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 715 25 0 0 0 chr2R 17136153 17136178 -4010530 + AT_rich Low_complexity Low_complexity 1 25 0 2 715 276 100 0 0 chr2R 17137404 17137444 -4009264 + (CGA)n Simple_repeat Simple_repeat 2 41 0 2 715 239 246 18 0 chr2R 17137869 17137926 -4008782 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 715 228 137 0 64 chr2R 17138063 17138141 -4008567 - ROO_I LTR Pao -7543 713 641 2 715 23 33 0 0 chr2R 17140568 17140598 -4006110 + AT_rich Low_complexity Low_complexity 1 30 0 2 715 22 35 0 0 chr2R 17141682 17141711 -4004997 + AT_rich Low_complexity Low_complexity 1 29 0 2 715 186 43 0 0 chr2R 17141966 17141989 -4004719 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 715 186 43 0 0 chr2R 17142045 17142068 -4004640 + (A)n Simple_repeat Simple_repeat 1 23 0 2 715 23 78 0 0 chr2R 17142378 17142429 -4004279 + AT_rich Low_complexity Low_complexity 1 51 0 2 715 238 217 36 12 chr2R 17142773 17142857 -4003851 + A-rich Low_complexity Low_complexity 3 88 0 2 715 228 67 0 0 chr2R 17145312 17145342 -4001366 + (CAGG)n Simple_repeat Simple_repeat 2 31 0 2 715 295 73 36 0 chr2R 17147191 17147246 -3999462 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 715 24 0 0 0 chr2R 17151486 17151510 -3995198 + AT_rich Low_complexity Low_complexity 1 24 0 2 715 24 32 0 0 chr2R 17157322 17157353 -3989355 + AT_rich Low_complexity Low_complexity 1 31 0 2 715 222 37 0 0 chr2R 17158285 17158312 -3988396 + (CAG)n Simple_repeat Simple_repeat 3 29 0 2 715 433 129 0 14 chr2R 17159429 17159500 -3987208 - DNAREP1_DM LINE Penelope -9 585 516 2 715 207 69 0 0 chr2R 17167644 17167673 -3979035 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 715 222 91 0 0 chr2R 17167835 17167868 -3978840 + (CTAAA)n Simple_repeat Simple_repeat 4 36 0 2 715 231 103 0 0 chr2R 17168239 17168278 -3978430 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 716 252 122 0 0 chr2R 17172972 17173013 -3973695 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 716 24 0 0 0 chr2R 17184008 17184032 -3962676 + AT_rich Low_complexity Low_complexity 1 24 0 2 716 210 37 0 0 chr2R 17196780 17196807 -3949901 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 716 26 0 0 0 chr2R 17207332 17207358 -3939350 + AT_rich Low_complexity Low_complexity 1 26 0 2 716 247 273 0 43 chr2R 17211916 17212031 -3934677 + (CAG)n Simple_repeat Simple_repeat 1 110 0 2 716 198 0 0 0 chr2R 17218811 17218833 -3927875 + (T)n Simple_repeat Simple_repeat 1 22 0 2 716 221 326 0 0 chr2R 17222749 17222847 -3923861 + GA-rich Low_complexity Low_complexity 3 100 0 2 716 236 194 0 46 chr2R 17224424 17224489 -3922219 + A-rich Low_complexity Low_complexity 4 65 0 2 716 258 211 13 13 chr2R 17225983 17226060 -3920648 + (CAG)n Simple_repeat Simple_repeat 1 77 0 2 716 237 109 65 0 chr2R 17226082 17226128 -3920580 + Gypsy11_I LTR Gypsy 520 568 -2956 2 716 227 304 0 0 chr2R 17226128 17226155 -3920553 + TART LINE telomeric 12689 12755 -1722 2 716 213 39 0 0 chr2R 17227453 17227479 -3919229 + (CAG)n Simple_repeat Simple_repeat 1 26 0 2 716 189 74 0 0 chr2R 17227878 17227905 -3918803 + (CAG)n Simple_repeat Simple_repeat 3 29 0 2 716 195 42 0 0 chr2R 17228409 17228433 -3918275 + (CAG)n Simple_repeat Simple_repeat 3 26 0 2 716 216 97 0 0 chr2R 17228520 17228551 -3918157 + (CAG)n Simple_repeat Simple_repeat 3 33 0 2 716 219 114 0 0 chr2R 17228849 17228884 -3917824 + (CAGT)n Simple_repeat Simple_repeat 4 38 0 2 716 24 32 0 0 chr2R 17232479 17232510 -3914198 + AT_rich Low_complexity Low_complexity 1 31 0 2 716 203 284 14 0 chr2R 17235465 17235539 -3911169 + (CCCGAA)n Simple_repeat Simple_repeat 2 76 0 2 716 23 33 0 0 chr2R 17237385 17237415 -3909293 + AT_rich Low_complexity Low_complexity 1 30 0 2 716 26 0 0 0 chr2R 17237593 17237619 -3909089 + AT_rich Low_complexity Low_complexity 1 26 0 2 716 180 0 0 0 chr2R 17238229 17238249 -3908459 + (CGAAA)n Simple_repeat Simple_repeat 3 22 0 2 716 25 31 0 0 chr2R 17238268 17238300 -3908408 + AT_rich Low_complexity Low_complexity 1 32 0 2 716 25 0 0 0 chr2R 17238418 17238443 -3908265 + AT_rich Low_complexity Low_complexity 1 25 0 2 716 30 83 0 0 chr2R 17240064 17240136 -3906572 + AT_rich Low_complexity Low_complexity 1 72 0 2 716 322 130 0 0 chr2R 17240237 17240291 -3906417 + HOBO DNA hAT 2963 3016 0 2 716 23 0 0 0 chr2R 17242448 17242471 -3904237 + AT_rich Low_complexity Low_complexity 1 23 0 2 716 201 171 0 0 chr2R 17242503 17242538 -3904170 + T-rich Low_complexity Low_complexity 1 35 0 2 716 222 229 16 0 chr2R 17243680 17243741 -3902967 + (CTG)n Simple_repeat Simple_repeat 1 62 0 2 716 189 0 0 0 chr2R 17247673 17247694 -3899014 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 716 213 121 0 0 chr2R 17250576 17250609 -3896099 + (GA)n Simple_repeat Simple_repeat 1 33 0 2 716 192 152 0 0 chr2R 17251616 17251649 -3895059 + (TATG)n Simple_repeat Simple_repeat 4 36 0 2 716 180 152 0 0 chr2R 17251970 17252003 -3894705 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2 716 201 39 0 0 chr2R 17252174 17252200 -3894508 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 716 189 171 0 0 chr2R 17257943 17257978 -3888730 + (CCGAG)n Simple_repeat Simple_repeat 3 37 0 2 716 31 0 0 0 chr2R 17258273 17258304 -3888404 + AT_rich Low_complexity Low_complexity 1 31 0 2 716 201 116 0 44 chr2R 17259373 17259418 -3887290 + A-rich Low_complexity Low_complexity 4 46 0 2 716 210 37 0 0 chr2R 17260029 17260056 -3886652 + (TTCTG)n Simple_repeat Simple_repeat 5 31 0 2 716 202 150 25 0 chr2R 17262393 17262433 -3884275 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 716 210 188 21 0 chr2R 17262589 17262637 -3884071 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 716 207 191 0 0 chr2R 17264293 17264335 -3882373 + (TTG)n Simple_repeat Simple_repeat 1 42 0 2 716 207 69 0 0 chr2R 17266041 17266070 -3880638 + (CTG)n Simple_repeat Simple_repeat 1 29 0 2 716 191 156 0 43 chr2R 17266140 17266187 -3880521 + (TTG)n Simple_repeat Simple_repeat 1 45 0 2 716 180 0 0 0 chr2R 17267046 17267066 -3879642 + (CCGAG)n Simple_repeat Simple_repeat 5 24 0 2 716 201 167 0 0 chr2R 17267604 17267640 -3879068 + (CAATT)n Simple_repeat Simple_repeat 1 36 0 2 716 21 57 0 0 chr2R 17269537 17269572 -3877136 + AT_rich Low_complexity Low_complexity 1 35 0 2 716 263 113 0 19 chr2R 17280173 17280227 -3866481 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 716 210 179 0 0 chr2R 17280636 17280692 -3866016 + (TTG)n Simple_repeat Simple_repeat 2 57 0 2 716 186 71 0 0 chr2R 17281104 17281132 -3865576 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2 716 29 28 0 0 chr2R 17281545 17281581 -3865127 + AT_rich Low_complexity Low_complexity 1 36 0 2 716 204 231 24 49 chr2R 17281711 17281793 -3864915 + T-rich Low_complexity Low_complexity 2 81 0 2 716 219 346 0 0 chr2R 17285769 17285847 -3860861 + (TCG)n Simple_repeat Simple_repeat 1 78 0 2 716 223 368 6 6 chr2R 17286442 17286606 -3860102 + (TTG)n Simple_repeat Simple_repeat 1 164 0 2 716 240 167 0 0 chr2R 17291625 17291673 -3855035 + (CAT)n Simple_repeat Simple_repeat 1 48 0 2 716 25 0 0 0 chr2R 17291916 17291941 -3854767 + AT_rich Low_complexity Low_complexity 1 25 0 2 716 210 71 0 0 chr2R 17294618 17294646 -3852062 + (TCCA)n Simple_repeat Simple_repeat 3 30 0 2 716 267 122 0 0 chr2R 17294681 17294730 -3851978 + (CAGT)n Simple_repeat Simple_repeat 3 51 0 2 716 21 0 0 0 chr2R 17298377 17298398 -3848310 + AT_rich Low_complexity Low_complexity 1 21 0 2 716 188 130 22 0 chr2R 17299198 17299244 -3847464 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 717 189 0 0 0 chr2R 17301675 17301696 -3845012 + (T)n Simple_repeat Simple_repeat 1 21 0 2 717 207 167 0 0 chr2R 17302080 17302122 -3844586 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 717 180 0 0 0 chr2R 17303460 17303480 -3843228 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 717 303 71 0 0 chr2R 17308879 17308921 -3837787 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 717 213 241 19 0 chr2R 17309413 17309467 -3837241 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 717 180 0 0 0 chr2R 17309656 17309676 -3837032 + (GAA)n Simple_repeat Simple_repeat 1 20 0 2 717 219 36 0 0 chr2R 17314471 17314499 -3832209 + (CCTG)n Simple_repeat Simple_repeat 3 30 0 2 717 291 54 0 0 chr2R 17316291 17316328 -3830380 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 717 204 97 0 0 chr2R 17320894 17320925 -3825783 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 717 180 158 0 0 chr2R 17323784 17323822 -3822886 + CT-rich Low_complexity Low_complexity 1 38 0 2 717 23 0 0 0 chr2R 17325168 17325191 -3821517 + AT_rich Low_complexity Low_complexity 1 23 0 2 717 24 53 0 0 chr2R 17325824 17325862 -3820846 + AT_rich Low_complexity Low_complexity 1 38 0 2 717 189 94 0 0 chr2R 17328052 17328084 -3818624 + (A)n Simple_repeat Simple_repeat 1 32 0 2 717 228 44 79 105 chr2R 17330724 17330800 -3815908 + (GAATG)n Simple_repeat Simple_repeat 2 75 0 2 717 195 42 0 0 chr2R 17331125 17331149 -3815559 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 717 243 0 0 0 chr2R 17331165 17331192 -3815516 + (T)n Simple_repeat Simple_repeat 1 27 0 2 717 26 30 0 0 chr2R 17331874 17331907 -3814801 + AT_rich Low_complexity Low_complexity 1 33 0 2 717 225 0 0 0 chr2R 17333554 17333579 -3813129 + (T)n Simple_repeat Simple_repeat 1 25 0 2 717 22 0 0 0 chr2R 17334526 17334548 -3812160 + AT_rich Low_complexity Low_complexity 1 22 0 2 717 189 74 0 0 chr2R 17336414 17336441 -3810267 + (CTG)n Simple_repeat Simple_repeat 3 29 0 2 717 224 59 0 29 chr2R 17337920 17337955 -3808753 + (TTG)n Simple_repeat Simple_repeat 3 36 0 2 717 201 241 0 0 chr2R 17338012 17338070 -3808638 + GA-rich Low_complexity Low_complexity 2 59 0 2 717 237 33 0 0 chr2R 17340941 17340971 -3805737 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 717 230 229 0 0 chr2R 17341073 17341121 -3805587 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 717 273 57 0 0 chr2R 17341881 17341916 -3804792 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2 717 22 0 0 0 chr2R 17345264 17345286 -3801422 + AT_rich Low_complexity Low_complexity 1 22 0 2 717 213 108 0 0 chr2R 17345514 17345551 -3801157 + (ATG)n Simple_repeat Simple_repeat 3 39 0 2 717 25 0 0 0 chr2R 17345809 17345834 -3800874 + AT_rich Low_complexity Low_complexity 1 25 0 2 717 340 113 19 0 chr2R 17347585 17347638 -3799070 + DNAREP1_DM LINE Penelope 532 585 -9 2 717 28 29 0 0 chr2R 17347670 17347705 -3799003 + AT_rich Low_complexity Low_complexity 1 35 0 2 717 224 77 0 25 chr2R 17350071 17350111 -3796597 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 2 717 198 0 0 0 chr2R 17350924 17350946 -3795762 + (CAGAGA)n Simple_repeat Simple_repeat 3 24 0 2 717 21 0 0 0 chr2R 17353091 17353112 -3793596 + AT_rich Low_complexity Low_complexity 1 21 0 2 717 201 39 0 0 chr2R 17353685 17353711 -3792997 + (A)n Simple_repeat Simple_repeat 1 26 0 2 717 183 80 0 0 chr2R 17356650 17356675 -3790033 + (A)n Simple_repeat Simple_repeat 1 25 0 2 717 189 121 0 0 chr2R 17356852 17356885 -3789823 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 717 209 227 0 0 chr2R 17357909 17357953 -3788755 + A-rich Low_complexity Low_complexity 1 44 0 2 717 27 0 0 0 chr2R 17360273 17360300 -3786408 + AT_rich Low_complexity Low_complexity 1 27 0 2 717 204 163 23 0 chr2R 17362542 17362585 -3784123 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 717 205 186 0 0 chr2R 17362814 17362857 -3783851 + (CAAA)n Simple_repeat Simple_repeat 3 45 0 2 717 23 0 0 0 chr2R 17363943 17363966 -3782742 + AT_rich Low_complexity Low_complexity 1 23 0 2 717 335 125 18 0 chr2R 17364037 17364093 -3782615 - DNAREP1_DM LINE Penelope -1 593 537 2 717 26 82 0 0 chr2R 17364625 17364686 -3782022 + AT_rich Low_complexity Low_complexity 1 61 0 2 717 28 29 0 0 chr2R 17365185 17365220 -3781488 + AT_rich Low_complexity Low_complexity 1 35 0 2 717 261 119 0 0 chr2R 17365693 17365735 -3780973 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 2 717 214 178 0 0 chr2R 17366746 17366791 -3779917 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 717 210 213 0 32 chr2R 17367098 17367161 -3779547 + (CAA)n Simple_repeat Simple_repeat 1 61 0 2 717 26 50 0 0 chr2R 17368192 17368232 -3778476 + AT_rich Low_complexity Low_complexity 1 40 0 2 717 25 31 0 0 chr2R 17376572 17376604 -3770104 + AT_rich Low_complexity Low_complexity 1 32 0 2 717 21 0 0 0 chr2R 17384291 17384312 -3762396 + AT_rich Low_complexity Low_complexity 1 21 0 2 717 211 219 0 0 chr2R 17384371 17384412 -3762296 + (TATG)n Simple_repeat Simple_repeat 1 41 0 2 717 27 73 0 0 chr2R 17385213 17385268 -3761440 + AT_rich Low_complexity Low_complexity 1 55 0 2 717 294 132 0 0 chr2R 17390215 17390268 -3756440 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 717 249 119 0 0 chr2R 17391369 17391411 -3755297 + (TTG)n Simple_repeat Simple_repeat 1 42 0 2 717 22 0 0 0 chr2R 17394890 17394912 -3751796 + AT_rich Low_complexity Low_complexity 1 22 0 2 717 183 42 0 0 chr2R 17395951 17395975 -3750733 + (CAT)n Simple_repeat Simple_repeat 1 24 0 2 717 231 247 0 23 chr2R 17399703 17399790 -3746918 + (CAA)n Simple_repeat Simple_repeat 3 87 0 2 717 222 37 0 0 chr2R 17399992 17400019 -3746689 + (CAGTT)n Simple_repeat Simple_repeat 4 30 0 2 717 219 150 0 0 chr2R 17400554 17400594 -3746114 + (A)n Simple_repeat Simple_repeat 1 40 0 2 717 27 62 0 0 chr2R 17401307 17401355 -3745353 + AT_rich Low_complexity Low_complexity 1 48 0 2 717 222 222 0 0 chr2R 17401839 17401884 -3744824 + (CAG)n Simple_repeat Simple_repeat 2 46 0 2 717 225 0 0 0 chr2R 17402649 17402674 -3744034 + (CATCG)n Simple_repeat Simple_repeat 1 25 0 2 717 185 94 0 30 chr2R 17402746 17402779 -3743929 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 717 339 25 0 0 chr2R 17404073 17404113 -3742595 + (ATTG)n Simple_repeat Simple_repeat 1 40 0 2 717 21 0 0 0 chr2R 17406546 17406567 -3740141 + AT_rich Low_complexity Low_complexity 1 21 0 2 717 21 0 0 0 chr2R 17408032 17408053 -3738655 + AT_rich Low_complexity Low_complexity 1 21 0 2 717 34 0 0 0 chr2R 17408915 17408949 -3737759 + AT_rich Low_complexity Low_complexity 1 34 0 2 717 35 24 0 0 chr2R 17409033 17409075 -3737633 + AT_rich Low_complexity Low_complexity 1 42 0 2 717 38 51 0 0 chr2R 17409412 17409471 -3737237 + AT_rich Low_complexity Low_complexity 1 59 0 2 717 201 132 0 0 chr2R 17410179 17410217 -3736491 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 717 186 43 0 0 chr2R 17411396 17411419 -3735289 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 717 25 51 0 0 chr2R 17411841 17411880 -3734828 + GC_rich Low_complexity Low_complexity 1 39 0 2 717 23 33 0 0 chr2R 17413836 17413866 -3732842 + AT_rich Low_complexity Low_complexity 1 30 0 2 717 210 71 0 0 chr2R 17414363 17414391 -3732317 + (TATG)n Simple_repeat Simple_repeat 4 31 0 2 717 216 67 0 0 chr2R 17417654 17417684 -3729024 + (CATAC)n Simple_repeat Simple_repeat 4 33 0 2 717 183 162 0 0 chr2R 17418130 17418167 -3728541 + A-rich Low_complexity Low_complexity 1 37 0 2 717 237 65 0 0 chr2R 17418917 17418948 -3727760 + (TCC)n Simple_repeat Simple_repeat 3 33 0 2 717 25 31 0 0 chr2R 17423226 17423258 -3723450 + AT_rich Low_complexity Low_complexity 1 32 0 2 717 390 139 0 0 chr2R 17429818 17429890 -3716818 + (CACTC)n Simple_repeat Simple_repeat 5 76 0 2 718 192 77 0 0 chr2R 17433157 17433183 -3713525 + (CAA)n Simple_repeat Simple_repeat 1 26 0 2 718 192 97 0 0 chr2R 17434087 17434118 -3712590 + (GA)n Simple_repeat Simple_repeat 1 31 0 2 718 198 0 0 0 chr2R 17434633 17434655 -3712053 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 718 195 42 0 0 chr2R 17434839 17434863 -3711845 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2 718 189 0 0 0 chr2R 17436797 17436818 -3709890 + (TATG)n Simple_repeat Simple_repeat 1 21 0 2 718 189 121 0 0 chr2R 17437851 17437884 -3708824 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 718 205 152 0 0 chr2R 17438496 17438529 -3708179 + (CAG)n Simple_repeat Simple_repeat 2 34 0 2 718 21 0 0 0 chr2R 17438969 17438990 -3707718 + AT_rich Low_complexity Low_complexity 1 21 0 2 718 192 170 0 0 chr2R 17441316 17441369 -3705339 + A-rich Low_complexity Low_complexity 1 53 0 2 718 22 70 0 0 chr2R 17447465 17447508 -3699200 + AT_rich Low_complexity Low_complexity 1 43 0 2 718 189 178 0 0 chr2R 17448537 17448582 -3698126 + (CCCGAA)n Simple_repeat Simple_repeat 4 48 0 2 718 243 61 0 0 chr2R 17450961 17450994 -3695714 + (CAT)n Simple_repeat Simple_repeat 1 33 0 2 718 279 0 0 0 chr2R 17452062 17452093 -3694615 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 718 30 27 0 0 chr2R 17452512 17452549 -3694159 + AT_rich Low_complexity Low_complexity 1 37 0 2 718 222 37 0 0 chr2R 17453728 17453755 -3692953 + (CAAGC)n Simple_repeat Simple_repeat 3 29 0 2 718 222 118 0 0 chr2R 17454137 17454171 -3692537 + (CAG)n Simple_repeat Simple_repeat 2 35 0 2 718 228 130 0 0 chr2R 17454305 17454351 -3692357 + (GCTG)n Simple_repeat Simple_repeat 4 49 0 2 718 231 88 0 0 chr2R 17454714 17454748 -3691960 + (CAG)n Simple_repeat Simple_repeat 3 36 0 2 718 252 59 0 0 chr2R 17454918 17454952 -3691756 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 718 23 33 0 0 chr2R 17455657 17455687 -3691021 + AT_rich Low_complexity Low_complexity 1 30 0 2 718 186 43 0 0 chr2R 17455867 17455890 -3690818 + (CGA)n Simple_repeat Simple_repeat 3 25 0 2 718 246 176 0 0 chr2R 17457527 17457578 -3689130 + (CGGA)n Simple_repeat Simple_repeat 4 54 0 2 718 27 0 0 0 chr2R 17457985 17458012 -3688696 + AT_rich Low_complexity Low_complexity 1 27 0 2 718 225 65 0 0 chr2R 17459116 17459147 -3687561 + (CAG)n Simple_repeat Simple_repeat 2 32 0 2 718 29 0 0 0 chr2R 17460383 17460412 -3686296 + AT_rich Low_complexity Low_complexity 1 29 0 2 718 186 133 0 0 chr2R 17460814 17460844 -3685864 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 718 228 149 0 0 chr2R 17461088 17461135 -3685573 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 718 348 190 0 0 chr2R 17461846 17461925 -3684783 + (TCCA)n Simple_repeat Simple_repeat 4 82 0 2 718 209 182 0 43 chr2R 17463161 17463207 -3683501 + (TATG)n Simple_repeat Simple_repeat 3 46 0 2 718 315 154 0 0 chr2R 17463632 17463697 -3683011 + (CAG)n Simple_repeat Simple_repeat 1 65 0 2 718 279 54 0 0 chr2R 17464175 17464212 -3682496 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 718 195 42 0 0 chr2R 17465185 17465209 -3681499 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 718 212 262 0 16 chr2R 17465419 17465481 -3681227 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 718 208 234 0 0 chr2R 17465687 17465734 -3680974 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 718 210 154 0 0 chr2R 17465903 17465942 -3680766 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 718 204 67 0 0 chr2R 17467508 17467538 -3679170 + (GA)n Simple_repeat Simple_repeat 2 31 0 2 718 212 231 0 0 chr2R 17468189 17468228 -3678480 + (CCCCAA)n Simple_repeat Simple_repeat 3 41 0 2 718 207 69 0 0 chr2R 17468392 17468421 -3678287 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 2 718 21 36 0 0 chr2R 17472584 17472612 -3674096 + AT_rich Low_complexity Low_complexity 1 28 0 2 718 180 0 0 0 chr2R 17472788 17472808 -3673900 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 718 27 29 0 0 chr2R 17473835 17473869 -3672839 + AT_rich Low_complexity Low_complexity 1 34 0 2 718 22 35 0 0 chr2R 17477619 17477648 -3669060 + AT_rich Low_complexity Low_complexity 1 29 0 2 718 302 152 0 17 chr2R 17480372 17480432 -3666276 + GA-rich Low_complexity Low_complexity 5 63 0 2 718 295 200 0 0 chr2R 17480923 17480978 -3665730 + (CGA)n Simple_repeat Simple_repeat 1 55 0 2 718 267 31 0 0 chr2R 17481568 17481600 -3665108 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 718 205 211 0 0 chr2R 17483776 17483814 -3662894 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 718 270 242 0 0 chr2R 17484497 17484559 -3662149 + (TAG)n Simple_repeat Simple_repeat 3 64 0 2 718 225 178 0 0 chr2R 17487011 17487056 -3659652 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 2 718 234 105 0 0 chr2R 17488931 17488969 -3657739 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 718 22 0 0 0 chr2R 17489565 17489587 -3657121 + AT_rich Low_complexity Low_complexity 1 22 0 2 718 219 146 0 0 chr2R 17491077 17491118 -3655590 + (CAGC)n Simple_repeat Simple_repeat 4 44 0 2 718 288 235 11 23 chr2R 17491565 17491652 -3655056 + A-rich Low_complexity Low_complexity 1 86 0 2 718 213 232 0 0 chr2R 17491798 17491867 -3654841 + (TTCGGG)n Simple_repeat Simple_repeat 4 72 0 2 718 219 188 0 0 chr2R 17497487 17497535 -3649173 + (CCGAA)n Simple_repeat Simple_repeat 1 48 0 2 718 33 25 0 0 chr2R 17500904 17500944 -3645764 + AT_rich Low_complexity Low_complexity 1 40 0 2 718 180 77 0 0 chr2R 17501656 17501682 -3645026 + (CGAT)n Simple_repeat Simple_repeat 2 27 0 2 718 198 236 0 0 chr2R 17518225 17518280 -3628428 + (CGA)n Simple_repeat Simple_repeat 1 55 0 2 718 345 244 0 43 chr2R 17523182 17523323 -3623385 + (CAG)n Simple_repeat Simple_repeat 2 136 0 2 718 213 39 0 0 chr2R 17525493 17525519 -3621189 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 718 211 125 25 0 chr2R 17531816 17531856 -3614852 + (CCCCAG)n Simple_repeat Simple_repeat 6 46 0 2 718 234 269 0 0 chr2R 17535891 17535943 -3610765 + (CATA)n Simple_repeat Simple_repeat 3 54 0 2 718 207 125 0 0 chr2R 17537429 17537469 -3609239 + (CGATG)n Simple_repeat Simple_repeat 1 40 0 2 718 417 116 0 0 chr2R 17537843 17537912 -3608796 + (CAG)n Simple_repeat Simple_repeat 3 71 0 2 718 259 204 0 139 chr2R 17538034 17538142 -3608566 + ROO_I LTR Pao 637 729 -7527 2 718 279 122 0 0 chr2R 17540194 17540243 -3606465 + (A)n Simple_repeat Simple_repeat 1 49 0 2 718 288 143 0 0 chr2R 17540545 17540601 -3606107 + (A)n Simple_repeat Simple_repeat 1 56 0 2 718 180 0 0 0 chr2R 17540929 17540949 -3605759 + (TAATG)n Simple_repeat Simple_repeat 2 21 0 2 718 223 184 20 0 chr2R 17541188 17541237 -3605471 + (CCGAA)n Simple_repeat Simple_repeat 1 50 0 2 718 22 0 0 0 chr2R 17542596 17542618 -3604090 + AT_rich Low_complexity Low_complexity 1 22 0 2 718 36 87 0 0 chr2R 17547754 17547846 -3598862 + AT_rich Low_complexity Low_complexity 1 92 0 2 718 32 57 0 0 chr2R 17551457 17551510 -3595198 + AT_rich Low_complexity Low_complexity 1 53 0 2 718 23 0 0 0 chr2R 17563526 17563549 -3583159 + AT_rich Low_complexity Low_complexity 1 23 0 2 719 212 0 36 0 chr2R 17570229 17570257 -3576451 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 719 204 40 0 0 chr2R 17574653 17574678 -3572030 + (CTG)n Simple_repeat Simple_repeat 1 25 0 2 719 24 32 0 0 chr2R 17575062 17575093 -3571615 + AT_rich Low_complexity Low_complexity 1 31 0 2 719 31 0 0 0 chr2R 17584967 17584998 -3561710 + AT_rich Low_complexity Low_complexity 1 31 0 2 719 190 167 16 16 chr2R 17585072 17585133 -3561575 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 719 221 240 0 0 chr2R 17585371 17585421 -3561287 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 719 258 253 0 0 chr2R 17585460 17585543 -3561165 + T-rich Low_complexity Low_complexity 1 83 0 2 719 22 103 0 0 chr2R 17586115 17586193 -3560515 + AT_rich Low_complexity Low_complexity 1 78 0 2 719 29 47 0 0 chr2R 17588494 17588537 -3558171 + AT_rich Low_complexity Low_complexity 1 43 0 2 719 284 0 28 0 chr2R 17590531 17590567 -3556141 + (CACAG)n Simple_repeat Simple_repeat 1 37 0 2 719 21 82 0 0 chr2R 17590952 17591001 -3555707 + AT_rich Low_complexity Low_complexity 1 49 0 2 719 26 0 0 0 chr2R 17592772 17592798 -3553910 + AT_rich Low_complexity Low_complexity 1 26 0 2 719 36 53 0 0 chr2R 17592912 17592969 -3553739 + AT_rich Low_complexity Low_complexity 1 57 0 2 719 45 55 0 0 chr2R 17593214 17593287 -3553421 + AT_rich Low_complexity Low_complexity 1 73 0 2 719 240 59 0 0 chr2R 17595290 17595324 -3551384 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 719 198 0 0 0 chr2R 17596860 17596882 -3549826 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 719 22 0 0 0 chr2R 17598245 17598267 -3548441 + AT_rich Low_complexity Low_complexity 1 22 0 2 719 28 0 0 0 chr2R 17600415 17600443 -3546265 + AT_rich Low_complexity Low_complexity 1 28 0 2 719 33 56 0 0 chr2R 17601394 17601448 -3545260 + AT_rich Low_complexity Low_complexity 1 54 0 2 719 23 54 0 0 chr2R 17604408 17604445 -3542263 + AT_rich Low_complexity Low_complexity 1 37 0 2 719 207 0 0 0 chr2R 17611727 17611750 -3534958 + (ATG)n Simple_repeat Simple_repeat 3 25 0 2 719 28 95 0 0 chr2R 17612056 17612140 -3534568 + AT_rich Low_complexity Low_complexity 1 84 0 2 719 21 95 0 0 chr2R 17614316 17614379 -3532329 + AT_rich Low_complexity Low_complexity 1 63 0 2 719 274 192 0 0 chr2R 17614503 17614555 -3532153 + DNAREP1_DM LINE Penelope 5 56 -538 2 719 213 196 0 0 chr2R 17622626 17622682 -3524026 + (TTG)n Simple_repeat Simple_repeat 2 57 0 2 719 207 69 0 0 chr2R 17624629 17624658 -3522050 + (ATG)n Simple_repeat Simple_repeat 2 30 0 2 719 3766 0 0 0 chr2R 17625837 17626265 -3520443 + ROO_LTR LTR Pao 1 428 0 2 719 70031 0 3 1 chr2R 17626265 17634511 -3512197 + ROO_I LTR Pao 1 8256 0 2 719 3749 2 0 0 chr2R 17634511 17634939 -3511769 + ROO_LTR LTR Pao 1 428 0 2 719 22 0 0 0 chr2R 17636268 17636290 -3510418 + AT_rich Low_complexity Low_complexity 1 22 0 2 719 3728 5 0 0 chr2R 17640643 17641071 -3505637 + ROO_LTR LTR Pao 1 428 0 2 719 21 100 0 0 chr2R 17642661 17642731 -3503977 + AT_rich Low_complexity Low_complexity 1 70 0 2 719 22 0 0 0 chr2R 17654117 17654139 -3492569 + AT_rich Low_complexity Low_complexity 1 22 0 2 719 22 35 0 0 chr2R 17656112 17656141 -3490567 + AT_rich Low_complexity Low_complexity 1 29 0 2 719 36 40 0 0 chr2R 17656590 17656640 -3490068 + AT_rich Low_complexity Low_complexity 1 50 0 2 719 21 0 0 0 chr2R 17656981 17657002 -3489706 + AT_rich Low_complexity Low_complexity 1 21 0 2 719 529 149 0 11 chr2R 17662381 17662498 -3484210 + DNAREP1_DM LINE Penelope 270 362 -232 2 719 281 53 0 0 chr2R 17662502 17662540 -3484168 + DNAREP1_DM LINE Penelope 519 556 -38 2 719 237 139 0 0 chr2R 17664686 17664729 -3481979 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 719 21 71 0 0 chr2R 17666013 17666055 -3480653 + AT_rich Low_complexity Low_complexity 1 42 0 2 719 21 0 0 0 chr2R 17669258 17669279 -3477429 + AT_rich Low_complexity Low_complexity 1 21 0 2 719 217 281 0 0 chr2R 17670393 17670450 -3476258 + (CCCCAA)n Simple_repeat Simple_repeat 1 57 0 2 719 33 56 0 0 chr2R 17671090 17671144 -3475564 + AT_rich Low_complexity Low_complexity 1 54 0 2 719 26 64 0 0 chr2R 17675362 17675409 -3471299 + AT_rich Low_complexity Low_complexity 1 47 0 2 719 247 274 0 0 chr2R 17679140 17679213 -3467495 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 2 719 207 133 0 0 chr2R 17681266 17681311 -3465397 + (GGA)n Simple_repeat Simple_repeat 2 46 0 2 719 222 91 0 0 chr2R 17683087 17683120 -3463588 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 2 719 27 0 0 0 chr2R 17684886 17684913 -3461795 + AT_rich Low_complexity Low_complexity 1 27 0 2 719 22 0 0 0 chr2R 17688693 17688715 -3457993 + AT_rich Low_complexity Low_complexity 1 22 0 2 719 261 57 0 0 chr2R 17692474 17692509 -3454199 + (CAACT)n Simple_repeat Simple_repeat 1 35 0 2 720 3963 7 0 0 chr2R 17697084 17697512 -3449196 + ROO_LTR LTR Pao 1 428 0 2 720 59297 1 0 0 chr2R 17697512 17704029 -3442679 + ROO_I LTR Pao 1 6517 -1739 2 720 7150 4 15 0 chr2R 17704028 17704838 -3441870 + ROO_I LTR Pao 7435 8256 0 2 720 3979 5 0 0 chr2R 17704838 17705266 -3441442 + ROO_LTR LTR Pao 1 428 0 2 720 305 148 18 18 chr2R 17706101 17706156 -3440552 - DNAREP1_DM LINE Penelope -122 472 418 2 720 23 33 0 0 chr2R 17715241 17715271 -3431437 + AT_rich Low_complexity Low_complexity 1 30 0 2 720 25 31 0 0 chr2R 17722974 17723006 -3423702 + AT_rich Low_complexity Low_complexity 1 32 0 2 720 232 213 0 62 chr2R 17729898 17729963 -3416745 + (CACCAT)n Simple_repeat Simple_repeat 1 61 0 2 720 200 111 28 0 chr2R 17730088 17730124 -3416584 + (TATATG)n Simple_repeat Simple_repeat 5 41 0 2 720 311 0 26 0 chr2R 17730524 17730563 -3416145 + (TAA)n Simple_repeat Simple_repeat 3 42 0 2 720 22 35 0 0 chr2R 17730568 17730597 -3416111 + AT_rich Low_complexity Low_complexity 1 29 0 2 720 255 31 0 0 chr2R 17730716 17730748 -3415960 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 720 30 45 0 0 chr2R 17732055 17732099 -3414609 + AT_rich Low_complexity Low_complexity 1 44 0 2 720 25 0 0 0 chr2R 17734772 17734797 -3411911 + AT_rich Low_complexity Low_complexity 1 25 0 2 720 188 170 0 19 chr2R 17739738 17739792 -3406916 + (CAGT)n Simple_repeat Simple_repeat 3 55 0 2 720 25 51 0 0 chr2R 17740128 17740167 -3406541 + AT_rich Low_complexity Low_complexity 1 39 0 2 720 243 0 0 0 chr2R 17740477 17740504 -3406204 + (TCC)n Simple_repeat Simple_repeat 3 29 0 2 720 285 151 0 0 chr2R 17743291 17743344 -3403364 + (CAA)n Simple_repeat Simple_repeat 2 54 0 2 720 189 196 0 0 chr2R 17743473 17743519 -3403189 + (TTG)n Simple_repeat Simple_repeat 2 47 0 2 720 242 216 20 102 chr2R 17745464 17745562 -3401146 + STALKER4_LTR LTR Gypsy 198 287 -115 2 720 22 0 0 0 chr2R 17745664 17745686 -3401022 + AT_rich Low_complexity Low_complexity 1 22 0 2 720 246 298 0 26 chr2R 17748476 17748593 -3398115 + (CAA)n Simple_repeat Simple_repeat 1 114 0 2 720 22 0 0 0 chr2R 17749507 17749529 -3397179 + AT_rich Low_complexity Low_complexity 1 22 0 2 720 231 250 0 0 chr2R 17752589 17752653 -3394055 + (TCG)n Simple_repeat Simple_repeat 3 66 0 2 720 38 39 0 0 chr2R 17756534 17756586 -3390122 + AT_rich Low_complexity Low_complexity 1 52 0 2 720 23 33 0 0 chr2R 17758379 17758409 -3388299 + AT_rich Low_complexity Low_complexity 1 30 0 2 720 23 0 0 0 chr2R 17761431 17761454 -3385254 + AT_rich Low_complexity Low_complexity 1 23 0 2 720 25 31 0 0 chr2R 17765093 17765125 -3381583 + AT_rich Low_complexity Low_complexity 1 32 0 2 720 201 156 0 0 chr2R 17766560 17766592 -3380116 + (CAT)n Simple_repeat Simple_repeat 1 32 0 2 720 24 53 0 0 chr2R 17768606 17768644 -3378064 + AT_rich Low_complexity Low_complexity 1 38 0 2 720 225 146 0 0 chr2R 17780959 17781007 -3365701 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 720 22 0 0 0 chr2R 17781715 17781737 -3364971 + AT_rich Low_complexity Low_complexity 1 22 0 2 720 231 36 0 0 chr2R 17786756 17786784 -3359924 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 720 23 68 0 0 chr2R 17788552 17788596 -3358112 + AT_rich Low_complexity Low_complexity 1 44 0 2 720 278 98 0 19 chr2R 17790279 17790331 -3356377 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 720 198 71 0 0 chr2R 17792524 17792552 -3354156 + (CAGT)n Simple_repeat Simple_repeat 3 30 0 2 720 205 240 0 0 chr2R 17794357 17794407 -3352301 + (CTG)n Simple_repeat Simple_repeat 3 52 0 2 720 26 0 0 0 chr2R 17800917 17800943 -3345765 + AT_rich Low_complexity Low_complexity 1 26 0 2 720 23 0 0 0 chr2R 17801638 17801661 -3345047 + AT_rich Low_complexity Low_complexity 1 23 0 2 720 25 0 0 0 chr2R 17802707 17802732 -3343976 + AT_rich Low_complexity Low_complexity 1 25 0 2 720 23 0 0 0 chr2R 17803628 17803651 -3343057 + AT_rich Low_complexity Low_complexity 1 23 0 2 720 21 36 0 0 chr2R 17807689 17807717 -3338991 + AT_rich Low_complexity Low_complexity 1 28 0 2 720 25 0 0 0 chr2R 17812691 17812716 -3333992 + AT_rich Low_complexity Low_complexity 1 25 0 2 720 23 33 0 0 chr2R 17812825 17812855 -3333853 + AT_rich Low_complexity Low_complexity 1 30 0 2 720 24 32 0 0 chr2R 17813132 17813163 -3333545 + AT_rich Low_complexity Low_complexity 1 31 0 2 720 186 43 0 0 chr2R 17814710 17814733 -3331975 + (A)n Simple_repeat Simple_repeat 1 23 0 2 720 234 0 0 0 chr2R 17815740 17815766 -3330942 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 2 720 22 35 0 0 chr2R 17819136 17819165 -3327543 + AT_rich Low_complexity Low_complexity 1 29 0 2 720 25 0 0 0 chr2R 17822489 17822514 -3324194 + AT_rich Low_complexity Low_complexity 1 25 0 2 720 183 42 0 0 chr2R 17824945 17824969 -3321739 + (CCTG)n Simple_repeat Simple_repeat 4 27 0 2 721 195 69 0 0 chr2R 17832045 17832074 -3314634 + (CCA)n Simple_repeat Simple_repeat 3 31 0 2 721 24 32 0 0 chr2R 17832722 17832753 -3313955 + AT_rich Low_complexity Low_complexity 1 31 0 2 721 186 103 0 0 chr2R 17834112 17834141 -3312567 + (CAAAAA)n Simple_repeat Simple_repeat 6 34 0 2 721 25 0 0 0 chr2R 17837425 17837450 -3309258 + AT_rich Low_complexity Low_complexity 1 25 0 2 721 319 309 0 0 chr2R 17841939 17842033 -3304675 + (CCG)n Simple_repeat Simple_repeat 3 96 0 2 721 189 74 0 0 chr2R 17843381 17843408 -3303300 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 721 21 36 0 0 chr2R 17846105 17846133 -3300575 + AT_rich Low_complexity Low_complexity 1 28 0 2 721 21 0 0 0 chr2R 17846238 17846259 -3300449 + GC_rich Low_complexity Low_complexity 1 21 0 2 721 24 0 0 0 chr2R 17847868 17847892 -3298816 + AT_rich Low_complexity Low_complexity 1 24 0 2 721 469 268 38 38 chr2R 17849443 17849656 -3297052 - SAR_DM Satellite Satellite -1030 442 230 2 721 21 0 0 0 chr2R 17850711 17850732 -3295976 + AT_rich Low_complexity Low_complexity 1 21 0 2 721 192 97 0 0 chr2R 17850992 17851023 -3295685 + (ATG)n Simple_repeat Simple_repeat 3 33 0 2 721 243 61 0 0 chr2R 17851187 17851220 -3295488 + (GCTG)n Simple_repeat Simple_repeat 3 35 0 2 721 27 0 0 0 chr2R 17853070 17853097 -3293611 + AT_rich Low_complexity Low_complexity 1 27 0 2 721 24 53 0 0 chr2R 17856882 17856920 -3289788 + AT_rich Low_complexity Low_complexity 1 38 0 2 721 23 0 0 0 chr2R 17860464 17860487 -3286221 + AT_rich Low_complexity Low_complexity 1 23 0 2 721 22 0 0 0 chr2R 17863847 17863869 -3282839 + AT_rich Low_complexity Low_complexity 1 22 0 2 721 212 140 19 57 chr2R 17863901 17863954 -3282754 + T-rich Low_complexity Low_complexity 3 53 0 2 721 22 35 0 0 chr2R 17865553 17865582 -3281126 + AT_rich Low_complexity Low_complexity 1 29 0 2 721 200 132 0 26 chr2R 17870292 17870331 -3276377 + (TTGG)n Simple_repeat Simple_repeat 1 38 0 2 721 184 167 20 20 chr2R 17875063 17875112 -3271596 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 721 22 35 0 0 chr2R 17889784 17889813 -3256895 + AT_rich Low_complexity Low_complexity 1 29 0 2 721 24 0 0 0 chr2R 17890814 17890838 -3255870 + AT_rich Low_complexity Low_complexity 1 24 0 2 721 246 217 0 0 chr2R 17892712 17892781 -3253927 + (CCG)n Simple_repeat Simple_repeat 2 70 0 2 721 25 0 0 0 chr2R 17895833 17895858 -3250850 + GC_rich Low_complexity Low_complexity 1 25 0 2 721 22 0 0 0 chr2R 17896700 17896722 -3249986 + AT_rich Low_complexity Low_complexity 1 22 0 2 721 189 0 0 0 chr2R 17899199 17899220 -3247488 + (CTCG)n Simple_repeat Simple_repeat 2 22 0 2 721 25 31 0 0 chr2R 17901321 17901353 -3245355 + AT_rich Low_complexity Low_complexity 1 32 0 2 721 216 167 0 0 chr2R 17902830 17902878 -3243830 + T-rich Low_complexity Low_complexity 1 48 0 2 721 23 0 0 0 chr2R 17905653 17905676 -3241032 + AT_rich Low_complexity Low_complexity 1 23 0 2 721 22 0 0 0 chr2R 17906248 17906270 -3240438 + AT_rich Low_complexity Low_complexity 1 22 0 2 721 192 40 0 0 chr2R 17908066 17908091 -3238617 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 721 219 189 0 0 chr2R 17908892 17908945 -3237763 + (CAA)n Simple_repeat Simple_repeat 2 54 0 2 721 23 54 0 0 chr2R 17911122 17911159 -3235549 + AT_rich Low_complexity Low_complexity 1 37 0 2 721 229 200 0 0 chr2R 17912094 17912139 -3234569 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 721 195 69 0 0 chr2R 17915729 17915758 -3230950 + (T)n Simple_repeat Simple_repeat 1 29 0 2 721 209 301 0 35 chr2R 17917791 17917877 -3228831 + (TG)n Simple_repeat Simple_repeat 1 83 0 2 721 180 200 0 0 chr2R 17919247 17919292 -3227416 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 721 35 41 0 0 chr2R 17927441 17927490 -3219218 + AT_rich Low_complexity Low_complexity 1 49 0 2 721 25 0 0 0 chr2R 17929280 17929305 -3217403 + AT_rich Low_complexity Low_complexity 1 25 0 2 721 23 33 0 0 chr2R 17932529 17932559 -3214149 + AT_rich Low_complexity Low_complexity 1 30 0 2 721 201 39 0 0 chr2R 17932697 17932723 -3213985 + (AACTG)n Simple_repeat Simple_repeat 3 28 0 2 721 25 0 0 0 chr2R 17933297 17933322 -3213386 + AT_rich Low_complexity Low_complexity 1 25 0 2 721 223 154 0 0 chr2R 17933575 17933614 -3213094 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 721 186 43 0 0 chr2R 17933714 17933737 -3212971 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 721 203 125 0 24 chr2R 17934403 17934444 -3212264 + (TTGG)n Simple_repeat Simple_repeat 1 40 0 2 721 336 24 0 0 chr2R 17934800 17934841 -3211867 + (TC)n Simple_repeat Simple_repeat 1 41 0 2 721 189 107 0 0 chr2R 17937387 17937415 -3209293 + (CAG)n Simple_repeat Simple_repeat 1 28 0 2 721 201 333 0 0 chr2R 17938577 17938646 -3208062 + (TG)n Simple_repeat Simple_repeat 1 69 0 2 721 27 29 0 0 chr2R 17939724 17939758 -3206950 + AT_rich Low_complexity Low_complexity 1 34 0 2 721 180 0 0 0 chr2R 17940874 17940894 -3205814 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 721 21 0 0 0 chr2R 17941394 17941415 -3205293 + AT_rich Low_complexity Low_complexity 1 21 0 2 721 189 74 0 0 chr2R 17941817 17941844 -3204864 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 721 22 80 0 0 chr2R 17942079 17942129 -3204579 + AT_rich Low_complexity Low_complexity 1 50 0 2 721 357 117 0 0 chr2R 17950662 17950722 -3195986 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 721 30 27 0 0 chr2R 17955848 17955885 -3190823 + AT_rich Low_complexity Low_complexity 1 37 0 2 722 25 0 0 0 chr2R 17956883 17956908 -3189800 + AT_rich Low_complexity Low_complexity 1 25 0 2 722 21 36 0 0 chr2R 17962993 17963021 -3183687 + AT_rich Low_complexity Low_complexity 1 28 0 2 722 24 67 0 0 chr2R 17963217 17963262 -3183446 + AT_rich Low_complexity Low_complexity 1 45 0 2 722 269 245 20 10 chr2R 17963752 17963851 -3182857 + (CA)n Simple_repeat Simple_repeat 1 100 0 2 722 249 83 0 0 chr2R 17965788 17965824 -3180884 + (CGAAT)n Simple_repeat Simple_repeat 3 38 0 2 722 192 40 0 0 chr2R 17977077 17977102 -3169606 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 2 722 185 0 40 0 chr2R 17978189 17978214 -3168494 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 722 312 208 0 0 chr2R 17980341 17980442 -3166266 + (TTG)n Simple_repeat Simple_repeat 3 103 0 2 722 338 299 6 6 chr2R 17980740 17980908 -3165800 + (TGG)n Simple_repeat Simple_repeat 3 170 0 2 722 243 254 0 29 chr2R 17981594 17981663 -3165045 + (CTGGGG)n Simple_repeat Simple_repeat 2 68 0 2 722 221 167 0 0 chr2R 17984039 17984081 -3162627 + (CACCAT)n Simple_repeat Simple_repeat 4 45 0 2 722 198 150 0 0 chr2R 17988934 17988974 -3157734 + (TTTCG)n Simple_repeat Simple_repeat 3 42 0 2 722 23 33 0 0 chr2R 17990341 17990371 -3156337 + AT_rich Low_complexity Low_complexity 1 30 0 2 722 27 29 0 0 chr2R 17995487 17995521 -3151187 + AT_rich Low_complexity Low_complexity 1 34 0 2 722 21 0 0 0 chr2R 17995751 17995772 -3150936 + AT_rich Low_complexity Low_complexity 1 21 0 2 722 203 0 37 0 chr2R 17995864 17995891 -3150817 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 722 250 273 0 0 chr2R 17999799 17999854 -3146854 + (CTG)n Simple_repeat Simple_repeat 1 55 0 2 722 26 0 0 0 chr2R 18000613 18000639 -3146069 + AT_rich Low_complexity Low_complexity 1 26 0 2 722 298 159 0 0 chr2R 18008345 18008389 -3138319 + DNAREP1_DM LINE Penelope 26 69 -525 2 722 209 224 0 17 chr2R 18009791 18009850 -3136858 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 722 30 0 0 0 chr2R 18010251 18010281 -3136427 + AT_rich Low_complexity Low_complexity 1 30 0 2 722 21 36 0 0 chr2R 18011840 18011868 -3134840 + AT_rich Low_complexity Low_complexity 1 28 0 2 722 276 343 0 0 chr2R 18012796 18012974 -3133734 + (ATG)n Simple_repeat Simple_repeat 2 179 0 2 722 40 21 0 0 chr2R 18021394 18021441 -3125267 + AT_rich Low_complexity Low_complexity 1 47 0 2 722 209 220 20 0 chr2R 18022363 18022413 -3124295 + (TTG)n Simple_repeat Simple_repeat 3 53 0 2 722 219 214 9 46 chr2R 18024184 18024292 -3122416 + (TAA)n Simple_repeat Simple_repeat 3 106 0 2 722 311 233 0 72 chr2R 18028457 18028582 -3118126 + GA-rich Low_complexity Low_complexity 6 121 0 2 722 204 97 0 0 chr2R 18028627 18028658 -3118050 + (GGAGAA)n Simple_repeat Simple_repeat 2 32 0 2 722 180 77 0 0 chr2R 18032717 18032743 -3113965 + (ATG)n Simple_repeat Simple_repeat 2 27 0 2 722 216 170 43 0 chr2R 18035867 18035914 -3110794 + (TTG)n Simple_repeat Simple_repeat 1 49 0 2 722 238 98 0 38 chr2R 18041926 18041979 -3104729 + (CATCC)n Simple_repeat Simple_repeat 4 54 0 2 722 221 270 0 0 chr2R 18044182 18044256 -3102452 + (CAG)n Simple_repeat Simple_repeat 1 74 0 2 722 207 146 0 0 chr2R 18044441 18044482 -3102226 + (CTG)n Simple_repeat Simple_repeat 1 41 0 2 722 396 88 0 0 chr2R 18044837 18044894 -3101814 + (CAG)n Simple_repeat Simple_repeat 3 59 0 2 722 200 273 18 0 chr2R 18044951 18045006 -3101702 + (CAG)n Simple_repeat Simple_repeat 2 57 0 2 722 204 158 0 0 chr2R 18046261 18046299 -3100409 + (CAG)n Simple_repeat Simple_repeat 3 40 0 2 722 224 100 0 24 chr2R 18047240 18047281 -3099427 + (CAG)n Simple_repeat Simple_repeat 2 41 0 2 722 22 35 0 0 chr2R 18048282 18048311 -3098397 + AT_rich Low_complexity Low_complexity 1 29 0 2 722 273 135 31 73 chr2R 18050468 18050564 -3096144 + ROO_I LTR Pao 639 730 -7526 2 722 261 128 0 0 chr2R 18050768 18050815 -3095893 + (CAG)n Simple_repeat Simple_repeat 3 49 0 2 722 239 222 21 32 chr2R 18051014 18051107 -3095601 + (CAG)n Simple_repeat Simple_repeat 1 92 0 2 722 237 180 0 0 chr2R 18052377 18052427 -3094281 + (CAG)n Simple_repeat Simple_repeat 3 52 0 2 722 198 192 0 0 chr2R 18053260 18053312 -3093396 + (CAGTT)n Simple_repeat Simple_repeat 4 55 0 2 722 201 94 0 0 chr2R 18055344 18055376 -3091332 + (CAT)n Simple_repeat Simple_repeat 3 34 0 2 722 231 88 0 0 chr2R 18057006 18057040 -3089668 + (CAG)n Simple_repeat Simple_repeat 2 35 0 2 722 195 139 0 0 chr2R 18068174 18068210 -3078498 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 722 24 32 0 0 chr2R 18073362 18073393 -3073315 + AT_rich Low_complexity Low_complexity 1 31 0 2 722 192 158 0 0 chr2R 18080692 18080730 -3065978 + (CTG)n Simple_repeat Simple_repeat 1 38 0 2 723 223 288 0 0 chr2R 18100541 18100600 -3046108 + (CGTG)n Simple_repeat Simple_repeat 1 59 0 2 723 22 0 0 0 chr2R 18113147 18113169 -3033539 + AT_rich Low_complexity Low_complexity 1 22 0 2 723 198 0 0 0 chr2R 18114518 18114540 -3032168 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 723 183 184 0 0 chr2R 18115865 18115903 -3030805 + (TTCGGG)n Simple_repeat Simple_repeat 4 41 0 2 723 27 0 0 0 chr2R 18116752 18116779 -3029929 + AT_rich Low_complexity Low_complexity 1 27 0 2 723 21 0 0 0 chr2R 18121675 18121696 -3025012 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 204 209 0 0 chr2R 18129753 18129796 -3016912 + (CGAG)n Simple_repeat Simple_repeat 4 46 0 2 723 27 29 0 0 chr2R 18131096 18131130 -3015578 + AT_rich Low_complexity Low_complexity 1 34 0 2 723 258 81 0 0 chr2R 18131965 18132002 -3014706 + (CAAAT)n Simple_repeat Simple_repeat 2 38 0 2 723 243 190 0 0 chr2R 18137920 18137978 -3008730 + (TTCA)n Simple_repeat Simple_repeat 2 59 0 2 723 243 0 0 0 chr2R 18138455 18138482 -3008226 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 723 219 146 0 0 chr2R 18140162 18140203 -3006505 + (CAG)n Simple_repeat Simple_repeat 2 42 0 2 723 189 147 0 0 chr2R 18142146 18142180 -3004528 + (CATA)n Simple_repeat Simple_repeat 4 37 0 2 723 191 143 0 39 chr2R 18145769 18145820 -3000888 + A-rich Low_complexity Low_complexity 1 49 0 2 723 218 182 68 0 chr2R 18147071 18147115 -2999593 + (CCCCAG)n Simple_repeat Simple_repeat 1 47 0 2 723 220 255 0 0 chr2R 18147146 18147197 -2999511 + (TCCG)n Simple_repeat Simple_repeat 1 51 0 2 723 523 108 10 10 chr2R 18150511 18150614 -2996094 + (CAG)n Simple_repeat Simple_repeat 3 105 0 2 723 27 62 0 0 chr2R 18151016 18151064 -2995644 + AT_rich Low_complexity Low_complexity 1 48 0 2 723 218 156 0 43 chr2R 18151717 18151764 -2994944 + (CAGAGA)n Simple_repeat Simple_repeat 6 50 0 2 723 195 157 0 0 chr2R 18151921 18151972 -2994736 + (TGGG)n Simple_repeat Simple_repeat 3 53 0 2 723 195 42 0 0 chr2R 18152671 18152695 -2994013 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 723 189 107 0 0 chr2R 18154046 18154074 -2992634 + (CAA)n Simple_repeat Simple_repeat 1 28 0 2 723 180 125 0 0 chr2R 18154109 18154141 -2992567 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 723 34 0 0 0 chr2R 18154337 18154371 -2992337 + AT_rich Low_complexity Low_complexity 1 34 0 2 723 206 219 0 0 chr2R 18154743 18154784 -2991924 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 723 200 301 0 40 chr2R 18155687 18155763 -2990945 + T-rich Low_complexity Low_complexity 1 73 0 2 723 278 250 0 0 chr2R 18156949 18157017 -2989691 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 723 186 118 0 0 chr2R 18158344 18158378 -2988330 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 723 215 213 0 0 chr2R 18159109 18159156 -2987552 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 723 182 37 0 36 chr2R 18161214 18161242 -2985466 + (CATTC)n Simple_repeat Simple_repeat 5 31 0 2 723 221 220 0 20 chr2R 18162484 18162535 -2984173 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 723 192 77 0 0 chr2R 18164355 18164381 -2982327 + (A)n Simple_repeat Simple_repeat 1 26 0 2 723 195 100 0 0 chr2R 18165561 18165591 -2981117 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 723 198 71 0 0 chr2R 18166829 18166857 -2979851 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 723 21 36 0 0 chr2R 18168112 18168140 -2978568 + AT_rich Low_complexity Low_complexity 1 28 0 2 723 202 132 26 0 chr2R 18168946 18168984 -2977724 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 723 309 51 0 0 chr2R 18169477 18169516 -2977192 + (CAAAG)n Simple_repeat Simple_repeat 4 42 0 2 723 210 258 0 31 chr2R 18169704 18169768 -2976940 + (CCCA)n Simple_repeat Simple_repeat 1 62 0 2 723 22 35 0 0 chr2R 18173900 18173929 -2972779 + AT_rich Low_complexity Low_complexity 1 29 0 2 723 28 29 0 0 chr2R 18173936 18173971 -2972737 + AT_rich Low_complexity Low_complexity 1 35 0 2 723 436 330 13 8 chr2R 18184620 18184858 -2961850 + SAR_DM Satellite Satellite 638 876 -596 2 723 473 273 26 31 chr2R 18184668 18184937 -2961771 - XDMR_DM Unknown Unknown 0 361 124 2 723 509 266 22 13 chr2R 18184930 18185155 -2961553 - XDMR_DM Unknown Unknown -7 353 127 2 723 21 0 0 0 chr2R 18185239 18185260 -2961448 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 21 36 0 0 chr2R 18189752 18189780 -2956928 + AT_rich Low_complexity Low_complexity 1 28 0 2 723 210 105 0 0 chr2R 18191407 18191445 -2955263 + (CATTT)n Simple_repeat Simple_repeat 4 41 0 2 723 27 62 0 0 chr2R 18193030 18193078 -2953630 + AT_rich Low_complexity Low_complexity 1 48 0 2 723 202 135 0 71 chr2R 18195459 18195515 -2951193 + (CAAAG)n Simple_repeat Simple_repeat 5 56 0 2 723 189 0 0 0 chr2R 18199686 18199707 -2947001 + (TA)n Simple_repeat Simple_repeat 1 21 0 2 723 21 0 0 0 chr2R 18200839 18200860 -2945848 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 186 118 0 0 chr2R 18202224 18202258 -2944450 + (ACTG)n Simple_repeat Simple_repeat 1 34 0 2 723 26 101 0 0 chr2R 18204126 18204215 -2942493 + AT_rich Low_complexity Low_complexity 1 89 0 2 723 186 143 0 0 chr2R 18205791 18205826 -2940882 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 723 279 157 0 0 chr2R 18215424 18215475 -2931233 + (ATG)n Simple_repeat Simple_repeat 2 52 0 2 723 21 0 0 0 chr2R 18217346 18217367 -2929341 + AT_rich Low_complexity Low_complexity 1 21 0 2 724 195 139 0 0 chr2R 18221553 18221589 -2925119 + (ATTTG)n Simple_repeat Simple_repeat 4 39 0 2 724 248 145 48 0 chr2R 18223657 18223719 -2922989 + (TTG)n Simple_repeat Simple_repeat 1 65 0 2 724 290 77 0 55 chr2R 18226200 18226255 -2920453 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 724 21 36 0 0 chr2R 18227996 18228024 -2918684 + AT_rich Low_complexity Low_complexity 1 28 0 2 724 242 237 0 17 chr2R 18230382 18230442 -2916266 + (CAA)n Simple_repeat Simple_repeat 2 60 0 2 724 278 232 10 48 chr2R 18232345 18232449 -2914259 - ROO_I LTR Pao -7513 743 644 2 724 15836 4 0 6 chr2R 18237259 18238976 -2907732 - LINEJ1_DM LINE Jockey 0 5020 3314 2 724 267 31 0 0 chr2R 18240877 18240909 -2905799 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 724 353 141 31 15 chr2R 18245254 18245319 -2901389 - DNAREP1_DM LINE Penelope 0 594 529 2 724 281 196 0 0 chr2R 18245394 18245445 -2901263 - DNAREP1_DM LINE Penelope -538 56 6 2 724 3046 0 0 30 chr2R 18247945 18248306 -2898402 + LINEJ1_DM LINE Jockey 4671 5020 0 2 724 216 111 0 0 chr2R 18249650 18249686 -2897022 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 724 180 125 0 0 chr2R 18253454 18253486 -2893222 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 2 724 203 220 17 17 chr2R 18258097 18258157 -2888551 + (CCCA)n Simple_repeat Simple_repeat 2 61 0 2 724 27 29 0 0 chr2R 18258292 18258326 -2888382 + AT_rich Low_complexity Low_complexity 1 34 0 2 724 25 0 0 0 chr2R 18258493 18258518 -2888190 + AT_rich Low_complexity Low_complexity 1 25 0 2 724 259 143 0 23 chr2R 18258608 18258651 -2888057 + C-rich Low_complexity Low_complexity 3 44 0 2 724 233 208 0 0 chr2R 18260879 18260927 -2885781 + CT-rich Low_complexity Low_complexity 2 49 0 2 724 24 0 0 0 chr2R 18262412 18262436 -2884272 + AT_rich Low_complexity Low_complexity 1 24 0 2 724 28 29 0 0 chr2R 18265963 18265998 -2880710 + AT_rich Low_complexity Low_complexity 1 35 0 2 724 299 117 0 48 chr2R 18270443 18270506 -2876202 + CT-rich Low_complexity Low_complexity 2 61 0 2 724 180 0 0 0 chr2R 18272934 18272954 -2873754 + (T)n Simple_repeat Simple_repeat 1 20 0 2 724 246 156 0 0 chr2R 18274974 18275019 -2871689 + (CATA)n Simple_repeat Simple_repeat 1 45 0 2 724 23 0 0 0 chr2R 18275051 18275074 -2871634 + AT_rich Low_complexity Low_complexity 1 23 0 2 724 25 31 0 0 chr2R 18281209 18281241 -2865467 + AT_rich Low_complexity Low_complexity 1 32 0 2 724 31 58 0 0 chr2R 18282335 18282387 -2864321 + AT_rich Low_complexity Low_complexity 1 52 0 2 724 183 80 0 0 chr2R 18284034 18284059 -2862649 + (A)n Simple_repeat Simple_repeat 1 25 0 2 724 264 130 0 0 chr2R 18284794 18284840 -2861868 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 724 24 85 0 0 chr2R 18291460 18291519 -2855189 + AT_rich Low_complexity Low_complexity 1 59 0 2 724 21 0 0 0 chr2R 18292955 18292976 -2853732 + AT_rich Low_complexity Low_complexity 1 21 0 2 724 23 54 0 0 chr2R 18296758 18296795 -2849913 + AT_rich Low_complexity Low_complexity 1 37 0 2 724 234 0 0 0 chr2R 18296831 18296857 -2849851 + (T)n Simple_repeat Simple_repeat 1 26 0 2 724 240 59 0 0 chr2R 18300630 18300664 -2846044 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2 724 21 36 0 0 chr2R 18303149 18303177 -2843531 + AT_rich Low_complexity Low_complexity 1 28 0 2 724 31 107 0 0 chr2R 18307941 18308063 -2838645 + AT_rich Low_complexity Low_complexity 1 122 0 2 724 27 29 0 0 chr2R 18308311 18308345 -2838363 + AT_rich Low_complexity Low_complexity 1 34 0 2 724 24 0 0 0 chr2R 18308381 18308405 -2838303 + AT_rich Low_complexity Low_complexity 1 24 0 2 724 354 100 0 0 chr2R 18328512 18328572 -2818136 + (ATTCG)n Simple_repeat Simple_repeat 3 62 0 2 724 204 132 26 0 chr2R 18330547 18330585 -2816123 + (GCTG)n Simple_repeat Simple_repeat 4 42 0 2 724 196 200 31 0 chr2R 18331771 18331836 -2814872 + (CATCC)n Simple_repeat Simple_repeat 1 67 0 2 724 207 139 0 0 chr2R 18335738 18335774 -2810934 + (CTG)n Simple_repeat Simple_repeat 3 38 0 2 724 210 171 0 0 chr2R 18338938 18338973 -2807735 + T-rich Low_complexity Low_complexity 2 36 0 2 724 236 200 17 0 chr2R 18342651 18342711 -2803997 + (CGAGT)n Simple_repeat Simple_repeat 2 62 0 2 724 333 82 0 0 chr2R 18345819 18345868 -2800840 + (ACCG)n Simple_repeat Simple_repeat 4 52 0 2 724 214 158 0 0 chr2R 18346931 18346969 -2799739 + (TGGA)n Simple_repeat Simple_repeat 3 40 0 2 724 193 84 113 0 chr2R 18347230 18347301 -2799407 + (CCTA)n Simple_repeat Simple_repeat 2 80 0 2 725 618 271 17 13 chr2R 18351640 18351872 -2794836 + SAR_DM Satellite Satellite 213 445 -1027 2 725 348 207 43 43 chr2R 18351754 18351895 -2794813 - XDMR_DM Unknown Unknown -1 359 219 2 725 1074 0 0 0 chr2R 18352881 18353012 -2793696 + BS LINE Jockey 4996 5126 0 2 725 331 268 6 13 chr2R 18357392 18357551 -2789157 + (CCA)n Simple_repeat Simple_repeat 1 158 0 2 725 21 36 0 0 chr2R 18359320 18359348 -2787360 + AT_rich Low_complexity Low_complexity 1 28 0 2 725 229 300 12 0 chr2R 18359421 18359501 -2787207 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 725 186 128 0 0 chr2R 18360196 18360235 -2786473 + (A)n Simple_repeat Simple_repeat 1 39 0 2 725 23 0 0 0 chr2R 18365592 18365615 -2781093 + AT_rich Low_complexity Low_complexity 1 23 0 2 725 26 0 0 0 chr2R 18365665 18365691 -2781017 + AT_rich Low_complexity Low_complexity 1 26 0 2 725 21 0 0 0 chr2R 18366940 18366961 -2779747 + AT_rich Low_complexity Low_complexity 1 21 0 2 725 273 151 0 0 chr2R 18386982 18387035 -2759673 + (CTG)n Simple_repeat Simple_repeat 1 53 0 2 725 234 143 0 0 chr2R 18388113 18388162 -2758546 + (CTG)n Simple_repeat Simple_repeat 3 51 0 2 725 354 123 0 0 chr2R 18388660 18388717 -2757991 + (CAT)n Simple_repeat Simple_repeat 3 59 0 2 725 180 0 0 0 chr2R 18388899 18388919 -2757789 + (CTG)n Simple_repeat Simple_repeat 3 22 0 2 725 216 170 0 0 chr2R 18389511 18389564 -2757144 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 725 23 54 0 0 chr2R 18389941 18389978 -2756730 + AT_rich Low_complexity Low_complexity 1 37 0 2 725 197 65 32 0 chr2R 18390440 18390471 -2756237 + (CTG)n Simple_repeat Simple_repeat 1 32 0 2 725 261 98 0 0 chr2R 18392111 18392152 -2754556 + (CAG)n Simple_repeat Simple_repeat 3 43 0 2 725 180 200 0 0 chr2R 18394868 18394908 -2751800 + (TCTCTG)n Simple_repeat Simple_repeat 4 43 0 2 725 202 278 14 0 chr2R 18401957 18402029 -2744679 + GA-rich Low_complexity Low_complexity 1 73 0 2 725 243 157 0 0 chr2R 18402351 18402402 -2744306 + (CAA)n Simple_repeat Simple_repeat 1 51 0 2 725 197 83 0 27 chr2R 18405117 18405154 -2741554 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 725 22 0 0 0 chr2R 18405895 18405917 -2740791 + AT_rich Low_complexity Low_complexity 1 22 0 2 725 180 77 0 0 chr2R 18406429 18406455 -2740253 + (CAG)n Simple_repeat Simple_repeat 2 27 0 2 725 197 159 0 22 chr2R 18408084 18408129 -2738579 + (CAG)n Simple_repeat Simple_repeat 3 46 0 2 725 21 0 0 0 chr2R 18408278 18408299 -2738409 + AT_rich Low_complexity Low_complexity 1 21 0 2 725 221 178 22 0 chr2R 18409835 18409880 -2736828 + (TTG)n Simple_repeat Simple_repeat 2 47 0 2 725 201 74 0 0 chr2R 18410101 18410128 -2736580 + (CTG)n Simple_repeat Simple_repeat 1 27 0 2 725 268 265 0 0 chr2R 18411270 18411353 -2735355 + (TGGA)n Simple_repeat Simple_repeat 3 85 0 2 725 32385 3 0 4 chr2R 18413320 18416803 -2729905 - LINEJ1_DM LINE Jockey 0 5020 1551 2 725 36 0 0 0 chr2R 18417301 18417337 -2729371 + AT_rich Low_complexity Low_complexity 1 36 0 2 725 213 39 0 0 chr2R 18418343 18418369 -2728339 + (CCA)n Simple_repeat Simple_repeat 3 28 0 2 725 22 56 0 0 chr2R 18418590 18418626 -2728082 + AT_rich Low_complexity Low_complexity 1 36 0 2 725 276 91 0 0 chr2R 18420463 18420507 -2726201 + (CGAAA)n Simple_repeat Simple_repeat 5 48 0 2 725 209 171 0 0 chr2R 18421063 18421098 -2725610 + (CTCG)n Simple_repeat Simple_repeat 3 37 0 2 725 210 128 0 0 chr2R 18421238 18421277 -2725431 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 725 315 146 0 0 chr2R 18424455 18424510 -2722198 + (TTG)n Simple_repeat Simple_repeat 1 55 0 2 725 186 43 0 0 chr2R 18429905 18429928 -2716780 + (TTCTCC)n Simple_repeat Simple_repeat 6 28 0 2 725 210 310 0 0 chr2R 18430929 18430987 -2715721 + (TTG)n Simple_repeat Simple_repeat 2 59 0 2 725 234 91 0 0 chr2R 18431355 18431388 -2715320 + (ATGGTG)n Simple_repeat Simple_repeat 4 36 0 2 725 201 74 0 0 chr2R 18432381 18432408 -2714300 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 725 207 0 0 0 chr2R 18432500 18432523 -2714185 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 725 24 0 0 0 chr2R 18433127 18433151 -2713557 + AT_rich Low_complexity Low_complexity 1 24 0 2 725 216 0 0 0 chr2R 18433924 18433948 -2712760 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 725 282 224 0 13 chr2R 18434352 18434429 -2712279 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 725 223 266 0 0 chr2R 18435392 18435456 -2711252 + A-rich Low_complexity Low_complexity 1 64 0 2 725 180 152 0 0 chr2R 18441790 18441823 -2704885 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 725 198 0 0 0 chr2R 18441837 18441859 -2704849 + (CGA)n Simple_repeat Simple_repeat 1 22 0 2 725 192 224 0 0 chr2R 18441922 18441989 -2704719 + (CAT)n Simple_repeat Simple_repeat 1 67 0 2 725 213 121 0 0 chr2R 18444609 18444642 -2702066 + (GGA)n Simple_repeat Simple_repeat 3 35 0 2 725 189 121 0 0 chr2R 18445033 18445066 -2701642 + (CTATA)n Simple_repeat Simple_repeat 3 35 0 2 725 26 50 0 0 chr2R 18445208 18445248 -2701460 + AT_rich Low_complexity Low_complexity 1 40 0 2 725 21 0 0 0 chr2R 18445336 18445357 -2701351 + AT_rich Low_complexity Low_complexity 1 21 0 2 725 25 0 0 0 chr2R 18445655 18445680 -2701028 + AT_rich Low_complexity Low_complexity 1 25 0 2 725 333 0 0 0 chr2R 18446796 18446833 -2699875 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 725 23 0 0 0 chr2R 18447306 18447329 -2699379 + AT_rich Low_complexity Low_complexity 1 23 0 2 725 249 83 0 0 chr2R 18447486 18447522 -2699186 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 725 28 29 0 0 chr2R 18447670 18447705 -2699003 + AT_rich Low_complexity Low_complexity 1 35 0 2 725 200 97 32 0 chr2R 18449032 18449063 -2697645 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 725 182 171 24 0 chr2R 18449252 18449293 -2697415 + (CTG)n Simple_repeat Simple_repeat 3 44 0 2 725 381 86 0 0 chr2R 18450648 18450706 -2696002 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 725 254 73 24 0 chr2R 18451251 18451292 -2695416 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 725 243 103 0 0 chr2R 18453769 18453808 -2692900 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 725 200 189 0 0 chr2R 18454512 18454549 -2692159 + (CAG)n Simple_repeat Simple_repeat 1 37 0 2 725 2068 0 0 0 chr2R 18467971 18468195 -2678513 + DIVER_LTR LTR Pao 1 224 0 2 725 52690 2 0 0 chr2R 18468216 18473859 -2672849 + DIVER_I LTR Pao 1 5643 0 2 725 2068 0 0 0 chr2R 18473859 18474083 -2672625 + DIVER_LTR LTR Pao 1 224 0 2 725 180 250 0 0 chr2R 18474393 18474441 -2672267 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 2 725 180 0 0 0 chr2R 18478995 18479015 -2667693 + (TCCG)n Simple_repeat Simple_repeat 4 23 0 2 725 26 30 0 0 chr2R 18480722 18480755 -2665953 + AT_rich Low_complexity Low_complexity 1 33 0 2 726 22 35 0 0 chr2R 18486250 18486279 -2660429 + AT_rich Low_complexity Low_complexity 1 29 0 2 726 21 0 0 0 chr2R 18487795 18487816 -2658892 + AT_rich Low_complexity Low_complexity 1 21 0 2 726 25 51 0 0 chr2R 18487960 18487999 -2658709 + AT_rich Low_complexity Low_complexity 1 39 0 2 726 189 74 0 0 chr2R 18488218 18488245 -2658463 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 726 22 0 0 0 chr2R 18493330 18493352 -2653356 + AT_rich Low_complexity Low_complexity 1 22 0 2 726 29 28 0 0 chr2R 18495921 18495957 -2650751 + AT_rich Low_complexity Low_complexity 1 36 0 2 726 267 140 0 0 chr2R 18501174 18501224 -2645484 + (CAGT)n Simple_repeat Simple_repeat 3 52 0 2 726 21 0 0 0 chr2R 18501637 18501658 -2645050 + AT_rich Low_complexity Low_complexity 1 21 0 2 726 228 86 0 0 chr2R 18504731 18504766 -2641942 + (TTTCC)n Simple_repeat Simple_repeat 3 37 0 2 726 222 143 0 0 chr2R 18505089 18505138 -2641570 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 726 215 79 0 26 chr2R 18508073 18508112 -2638596 + (ATTCG)n Simple_repeat Simple_repeat 5 42 0 2 726 269 221 0 13 chr2R 18510272 18510350 -2636358 + (TG)n Simple_repeat Simple_repeat 1 77 0 2 726 240 86 0 0 chr2R 18511746 18511781 -2634927 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 726 212 239 0 0 chr2R 18513952 18513998 -2632710 + (GGATG)n Simple_repeat Simple_repeat 5 50 0 2 726 25 0 0 0 chr2R 18514517 18514542 -2632166 + AT_rich Low_complexity Low_complexity 1 25 0 2 726 186 43 0 0 chr2R 18515173 18515196 -2631512 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 726 216 133 44 0 chr2R 18518953 18518998 -2627710 + CT-rich Low_complexity Low_complexity 2 48 0 2 726 211 200 0 0 chr2R 18521826 18521871 -2624837 + (CTG)n Simple_repeat Simple_repeat 2 46 0 2 726 203 156 0 0 chr2R 18527216 18527248 -2619460 + (CTG)n Simple_repeat Simple_repeat 3 34 0 2 726 38 0 0 0 chr2R 18529264 18529302 -2617406 + AT_rich Low_complexity Low_complexity 1 38 0 2 726 194 128 26 0 chr2R 18533612 18533651 -2613057 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 726 27 29 0 0 chr2R 18534977 18535011 -2611697 + AT_rich Low_complexity Low_complexity 1 34 0 2 726 389 309 22 11 chr2R 18536054 18536237 -2610471 - XDMR Unknown Unknown -174 187 3 2 726 425 256 60 53 chr2R 18536106 18536407 -2610301 + SAR_DM Satellite Satellite 224 526 -946 2 726 1002 112 83 104 chr2R 18537739 18537969 -2608739 - DNAREP1_DM LINE Penelope -66 528 304 2 726 196 72 0 67 chr2R 18539439 18539484 -2607224 + (TAA)n Simple_repeat Simple_repeat 2 43 0 2 726 23 0 0 0 chr2R 18544893 18544916 -2601792 + AT_rich Low_complexity Low_complexity 1 23 0 2 726 23 0 0 0 chr2R 18544954 18544977 -2601731 + AT_rich Low_complexity Low_complexity 1 23 0 2 726 216 200 0 0 chr2R 18548712 18548767 -2597941 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 726 213 39 0 0 chr2R 18552137 18552163 -2594545 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 726 23 0 0 0 chr2R 18554229 18554252 -2592456 + AT_rich Low_complexity Low_complexity 1 23 0 2 726 21 0 0 0 chr2R 18556473 18556494 -2590214 + AT_rich Low_complexity Low_complexity 1 21 0 2 726 183 184 0 0 chr2R 18563394 18563432 -2583276 + G-rich Low_complexity Low_complexity 2 39 0 2 726 228 111 0 0 chr2R 18564419 18564455 -2582253 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 726 280 194 10 31 chr2R 18566648 18566744 -2579964 + ROO_I LTR Pao 641 734 -7522 2 726 247 250 0 30 chr2R 18567435 18567501 -2579207 + (CAG)n Simple_repeat Simple_repeat 2 65 0 2 726 21 57 0 0 chr2R 18568168 18568203 -2578505 + AT_rich Low_complexity Low_complexity 1 35 0 2 726 181 143 27 54 chr2R 18568651 18568725 -2577983 + (CAAAC)n Simple_repeat Simple_repeat 5 76 0 2 726 228 281 0 0 chr2R 18572041 18572105 -2574603 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 726 34 24 0 0 chr2R 18572460 18572501 -2574207 + AT_rich Low_complexity Low_complexity 1 41 0 2 726 27 0 0 0 chr2R 18572792 18572819 -2573889 + AT_rich Low_complexity Low_complexity 1 27 0 2 726 21 36 0 0 chr2R 18573530 18573558 -2573150 + AT_rich Low_complexity Low_complexity 1 28 0 2 726 206 136 0 22 chr2R 18575870 18575915 -2570793 + (CTG)n Simple_repeat Simple_repeat 3 46 0 2 726 31 26 0 0 chr2R 18576966 18577004 -2569704 + AT_rich Low_complexity Low_complexity 1 38 0 2 726 185 94 31 0 chr2R 18580383 18580415 -2566293 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 726 24 0 0 0 chr2R 18580923 18580947 -2565761 + AT_rich Low_complexity Low_complexity 1 24 0 2 726 204 40 0 0 chr2R 18581150 18581175 -2565533 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 726 237 167 0 0 chr2R 18587723 18587777 -2558931 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 726 24 32 0 0 chr2R 18588672 18588703 -2558005 + AT_rich Low_complexity Low_complexity 1 31 0 2 726 22 0 0 0 chr2R 18600223 18600245 -2546463 + AT_rich Low_complexity Low_complexity 1 22 0 2 727 216 200 0 20 chr2R 18615794 18615845 -2530863 + (CGAAA)n Simple_repeat Simple_repeat 3 52 0 2 727 222 91 0 0 chr2R 18616097 18616130 -2530578 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 727 180 0 0 0 chr2R 18616173 18616193 -2530515 + (CAA)n Simple_repeat Simple_repeat 3 22 0 2 727 265 226 0 0 chr2R 18617030 18617092 -2529616 - DNAREP1_DM LINE Penelope -37 557 496 2 727 27 0 0 0 chr2R 18617763 18617790 -2528918 + AT_rich Low_complexity Low_complexity 1 27 0 2 727 214 192 0 19 chr2R 18618704 18618757 -2527951 + (CTG)n Simple_repeat Simple_repeat 1 52 0 2 727 198 91 0 0 chr2R 18622454 18622487 -2524221 + (CAACT)n Simple_repeat Simple_repeat 2 34 0 2 727 209 169 17 0 chr2R 18628483 18628542 -2518166 + T-rich Low_complexity Low_complexity 5 64 0 2 727 191 103 0 25 chr2R 18628564 18628604 -2518104 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 727 28 29 0 0 chr2R 18628831 18628866 -2517842 + AT_rich Low_complexity Low_complexity 1 35 0 2 727 22 0 0 0 chr2R 18628921 18628943 -2517765 + AT_rich Low_complexity Low_complexity 1 22 0 2 727 333 47 0 0 chr2R 18629048 18629091 -2517617 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 727 22 0 0 0 chr2R 18629358 18629380 -2517328 + AT_rich Low_complexity Low_complexity 1 22 0 2 727 219 36 0 0 chr2R 18630160 18630188 -2516520 + (TTA)n Simple_repeat Simple_repeat 3 30 0 2 727 183 42 0 0 chr2R 18630900 18630924 -2515784 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 727 241 185 0 18 chr2R 18631154 18631209 -2515499 + GA-rich Low_complexity Low_complexity 1 54 0 2 727 221 258 0 31 chr2R 18633177 18633241 -2513467 + (CAGAGA)n Simple_repeat Simple_repeat 4 65 0 2 727 189 74 0 0 chr2R 18637051 18637078 -2509630 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 727 216 0 0 0 chr2R 18638105 18638129 -2508579 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 727 204 273 0 0 chr2R 18639446 18639490 -2507218 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 727 261 128 0 0 chr2R 18639636 18639683 -2507025 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 727 222 128 0 0 chr2R 18640255 18640294 -2506414 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 727 35 41 0 0 chr2R 18643375 18643424 -2503284 + AT_rich Low_complexity Low_complexity 1 49 0 2 727 21 57 0 0 chr2R 18643458 18643493 -2503215 + AT_rich Low_complexity Low_complexity 1 35 0 2 727 222 118 0 0 chr2R 18647379 18647413 -2499295 + (CCA)n Simple_repeat Simple_repeat 2 35 0 2 727 295 188 0 59 chr2R 18647755 18647840 -2498868 - ROO_I LTR Pao -7536 720 641 2 727 245 327 0 0 chr2R 18647957 18648058 -2498650 + (CAT)n Simple_repeat Simple_repeat 3 103 0 2 727 234 81 0 0 chr2R 18648219 18648256 -2498452 + (T)n Simple_repeat Simple_repeat 1 37 0 2 727 230 288 0 0 chr2R 18653115 18653216 -2493492 + (TG)n Simple_repeat Simple_repeat 1 101 0 2 727 195 129 0 0 chr2R 18655537 18655568 -2491140 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 727 32 43 0 0 chr2R 18659606 18659652 -2487056 + AT_rich Low_complexity Low_complexity 1 46 0 2 727 21 0 0 0 chr2R 18661553 18661574 -2485134 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 243 157 0 0 chr2R 18661880 18661931 -2484777 + (TGAG)n Simple_repeat Simple_repeat 2 52 0 2 727 3083 6 0 3 chr2R 18662528 18662877 -2483831 + LINEJ1_DM LINE Jockey 4673 5020 0 2 727 21 0 0 0 chr2R 18672411 18672432 -2474276 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 21 0 0 0 chr2R 18673422 18673443 -2473265 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 331 259 0 11 chr2R 18676655 18676745 -2469963 + (CA)n Simple_repeat Simple_repeat 1 89 0 2 727 22 56 0 0 chr2R 18679227 18679263 -2467445 + AT_rich Low_complexity Low_complexity 1 36 0 2 727 189 132 0 0 chr2R 18681603 18681641 -2465067 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 727 234 136 0 0 chr2R 18682652 18682696 -2464012 + (TTCTG)n Simple_repeat Simple_repeat 2 45 0 2 727 222 37 0 0 chr2R 18683394 18683421 -2463287 + (CATTT)n Simple_repeat Simple_repeat 1 27 0 2 727 228 200 0 0 chr2R 18684445 18684515 -2462193 + CT-rich Low_complexity Low_complexity 2 71 0 2 727 206 234 0 0 chr2R 18684560 18684607 -2462101 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 727 203 171 0 0 chr2R 18684619 18684654 -2462054 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 727 240 229 0 0 chr2R 18684780 18684863 -2461845 + (TTG)n Simple_repeat Simple_repeat 1 83 0 2 727 21 36 0 0 chr2R 18694669 18694697 -2452011 + AT_rich Low_complexity Low_complexity 1 28 0 2 727 21 36 0 0 chr2R 18696825 18696853 -2449855 + AT_rich Low_complexity Low_complexity 1 28 0 2 727 566 130 65 0 chr2R 18703368 18703460 -2443248 + DNAREP1_DM LINE Penelope 3 100 -494 2 727 228 86 0 0 chr2R 18705467 18705502 -2441206 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 727 403 294 0 0 chr2R 18708878 18709055 -2437653 + GA-rich Low_complexity Low_complexity 2 178 0 2 727 180 125 0 0 chr2R 18709500 18709532 -2437176 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 727 21 0 0 0 chr2R 18724153 18724174 -2422534 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 2102 15 53 11 chr2R 18730597 18730861 -2415847 - BLASTOPIA_LTR LTR Gypsy 0 275 1 2 727 1141 8 0 0 chr2R 18730861 18730986 -2415722 - BLASTOPIA_I LTR Gypsy 0 4481 4357 2 727 11483 0 1 0 chr2R 18730980 18732238 -2414470 - BLASTOPIA_I LTR Gypsy -3222 1259 1 2 727 2102 15 53 11 chr2R 18732238 18732502 -2414206 - BLASTOPIA_LTR LTR Gypsy 0 275 1 2 727 23 0 0 0 chr2R 18733143 18733166 -2413542 + AT_rich Low_complexity Low_complexity 1 23 0 2 728 264 100 0 0 chr2R 18747859 18747899 -2398809 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 728 264 30 0 0 chr2R 18748053 18748086 -2398622 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 728 22 56 0 0 chr2R 18748536 18748572 -2398136 + AT_rich Low_complexity Low_complexity 1 36 0 2 728 508 247 93 25 chr2R 18748621 18748783 -2397925 - DNAREP1_DM LINE Penelope -8 586 414 2 728 21 36 0 0 chr2R 18748929 18748957 -2397751 + AT_rich Low_complexity Low_complexity 1 28 0 2 728 321 169 0 0 chr2R 18751768 18751827 -2394881 + (CCA)n Simple_repeat Simple_repeat 1 59 0 2 728 211 139 23 0 chr2R 18752552 18752595 -2394113 + (TAA)n Simple_repeat Simple_repeat 3 46 0 2 728 21 0 0 0 chr2R 18754617 18754638 -2392070 + AT_rich Low_complexity Low_complexity 1 21 0 2 728 28 29 0 0 chr2R 18754679 18754714 -2391994 + AT_rich Low_complexity Low_complexity 1 35 0 2 728 22 56 0 0 chr2R 18756567 18756603 -2390105 + AT_rich Low_complexity Low_complexity 1 36 0 2 728 29 28 0 0 chr2R 18758349 18758385 -2388323 + AT_rich Low_complexity Low_complexity 1 36 0 2 728 31 68 0 0 chr2R 18762047 18762106 -2384602 + AT_rich Low_complexity Low_complexity 1 59 0 2 728 186 43 0 0 chr2R 18763053 18763076 -2383632 + (CCAA)n Simple_repeat Simple_repeat 4 26 0 2 728 24 32 0 0 chr2R 18773778 18773809 -2372899 + AT_rich Low_complexity Low_complexity 1 31 0 2 728 402 205 9 0 chr2R 18781424 18781536 -2365172 + ROO_I LTR Pao 639 751 -7505 2 728 22 35 0 0 chr2R 18783233 18783262 -2363446 + AT_rich Low_complexity Low_complexity 1 29 0 2 728 21 0 0 0 chr2R 18783514 18783535 -2363173 + AT_rich Low_complexity Low_complexity 1 21 0 2 728 204 67 0 0 chr2R 18784832 18784862 -2361846 + (ATTCG)n Simple_repeat Simple_repeat 4 33 0 2 728 180 179 0 0 chr2R 18795084 18795123 -2351585 + (GATTG)n Simple_repeat Simple_repeat 4 42 0 2 728 335 320 0 0 chr2R 18799128 18799410 -2347298 + (CCCGAA)n Simple_repeat Simple_repeat 1 282 0 2 728 443 338 0 0 chr2R 18799453 18799749 -2346959 + (CCCGAA)n Simple_repeat Simple_repeat 1 296 0 2 728 189 0 0 0 chr2R 18802149 18802170 -2344538 + (CAGAT)n Simple_repeat Simple_repeat 5 25 0 2 728 33 56 0 0 chr2R 18806446 18806500 -2340208 + AT_rich Low_complexity Low_complexity 1 54 0 2 728 21 0 0 0 chr2R 18817228 18817249 -2329459 + AT_rich Low_complexity Low_complexity 1 21 0 2 728 211 325 25 0 chr2R 18821673 18821753 -2324955 + (TATG)n Simple_repeat Simple_repeat 1 82 0 2 728 186 71 0 0 chr2R 18822628 18822656 -2324052 + (GAGTG)n Simple_repeat Simple_repeat 5 32 0 2 728 210 179 12 49 chr2R 18823888 18823970 -2322738 + (CCG)n Simple_repeat Simple_repeat 1 79 0 2 728 38 75 0 0 chr2R 18825158 18825238 -2321470 + AT_rich Low_complexity Low_complexity 1 80 0 2 728 250 186 0 0 chr2R 18828948 18828991 -2317717 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 728 270 73 0 0 chr2R 18834114 18834155 -2312553 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 728 260 221 0 14 chr2R 18836467 18836536 -2310172 + (TTCA)n Simple_repeat Simple_repeat 4 71 0 2 728 312 175 0 0 chr2R 18837964 18838027 -2308681 + (ACTG)n Simple_repeat Simple_repeat 3 65 0 2 728 276 273 0 11 chr2R 18838442 18838531 -2308177 + (CTG)n Simple_repeat Simple_repeat 1 88 0 2 728 21 89 0 0 chr2R 18838652 18838708 -2308000 + AT_rich Low_complexity Low_complexity 1 56 0 2 728 204 40 0 0 chr2R 18841515 18841540 -2305168 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 728 204 111 0 0 chr2R 18845601 18845637 -2301071 + (ACTG)n Simple_repeat Simple_repeat 4 39 0 2 728 2295 15 7 11 chr2R 18846357 18846633 -2300075 + BLASTOPIA_LTR LTR Gypsy 1 275 0 2 728 41494 2 1 0 chr2R 18846633 18851110 -2295598 + BLASTOPIA_I LTR Gypsy 1 4481 0 2 728 2259 15 7 11 chr2R 18851110 18851382 -2295326 + BLASTOPIA_LTR LTR Gypsy 1 271 -4 2 728 258 32 0 0 chr2R 18851382 18851413 -2295295 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 728 24 32 0 0 chr2R 18851774 18851805 -2294903 + AT_rich Low_complexity Low_complexity 1 31 0 2 728 267 31 0 0 chr2R 18854574 18854606 -2292102 + (GGA)n Simple_repeat Simple_repeat 3 34 0 2 728 280 77 0 37 chr2R 18855017 18855071 -2291637 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 728 225 0 0 0 chr2R 18863039 18863064 -2283644 + (CTG)n Simple_repeat Simple_repeat 1 25 0 2 728 522 279 0 65 chr2R 18870261 18870614 -2276094 + DMSAT6 Satellite Satellite 23 352 -118 2 729 183 170 0 0 chr2R 18875867 18875914 -2270794 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 729 242 213 16 0 chr2R 18876945 18877006 -2269702 + (CAGC)n Simple_repeat Simple_repeat 2 63 0 2 729 210 65 0 80 chr2R 18878151 18878201 -2268507 + (CACTC)n Simple_repeat Simple_repeat 3 48 0 2 729 186 43 0 0 chr2R 18881891 18881914 -2264794 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 729 25 65 0 0 chr2R 18884893 18884939 -2261769 + AT_rich Low_complexity Low_complexity 1 46 0 2 729 189 0 0 0 chr2R 18885605 18885626 -2261082 + (ATATG)n Simple_repeat Simple_repeat 1 21 0 2 729 25 31 0 0 chr2R 18888448 18888480 -2258228 + AT_rich Low_complexity Low_complexity 1 32 0 2 729 225 83 0 0 chr2R 18888850 18888886 -2257822 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 729 22 0 0 0 chr2R 18889880 18889902 -2256806 + AT_rich Low_complexity Low_complexity 1 22 0 2 729 21 0 0 0 chr2R 18890768 18890789 -2255919 + AT_rich Low_complexity Low_complexity 1 21 0 2 729 186 43 0 0 chr2R 18891038 18891061 -2255647 + (TAG)n Simple_repeat Simple_repeat 2 24 0 2 729 21 0 0 0 chr2R 18892019 18892040 -2254668 + AT_rich Low_complexity Low_complexity 1 21 0 2 729 220 250 0 0 chr2R 18892340 18892392 -2254316 + (CTG)n Simple_repeat Simple_repeat 2 53 0 2 729 221 295 0 0 chr2R 18894145 18894206 -2252502 + (CTG)n Simple_repeat Simple_repeat 1 61 0 2 729 183 80 0 0 chr2R 18894400 18894425 -2252283 + (CAGTT)n Simple_repeat Simple_repeat 2 26 0 2 729 186 43 0 0 chr2R 18894692 18894715 -2251993 + (TATG)n Simple_repeat Simple_repeat 1 23 0 2 729 212 74 0 100 chr2R 18898324 18898384 -2248324 + (CAAAG)n Simple_repeat Simple_repeat 1 54 0 2 729 275 282 16 24 chr2R 18900354 18900481 -2246227 + (CTG)n Simple_repeat Simple_repeat 1 126 0 2 729 27 62 0 0 chr2R 18902449 18902497 -2244211 + AT_rich Low_complexity Low_complexity 1 48 0 2 729 309 109 0 0 chr2R 18903168 18903223 -2243485 + (CGATG)n Simple_repeat Simple_repeat 5 59 0 2 729 210 91 0 57 chr2R 18904534 18904569 -2242139 + (CGGT)n Simple_repeat Simple_repeat 3 35 0 2 729 243 319 0 0 chr2R 18905621 18905690 -2241018 + (GCTG)n Simple_repeat Simple_repeat 4 72 0 2 729 309 153 0 0 chr2R 18906156 18906228 -2240480 + (TGGA)n Simple_repeat Simple_repeat 3 74 0 2 729 186 167 0 0 chr2R 18908229 18908265 -2238443 + (CAG)n Simple_repeat Simple_repeat 1 36 0 2 729 208 163 23 0 chr2R 18908471 18908514 -2238194 + (CCA)n Simple_repeat Simple_repeat 1 44 0 2 729 213 178 0 0 chr2R 18914909 18914954 -2231754 + (CAA)n Simple_repeat Simple_repeat 3 47 0 2 729 21 71 0 0 chr2R 18915546 18915588 -2231120 + AT_rich Low_complexity Low_complexity 1 42 0 2 729 213 65 0 0 chr2R 18916273 18916304 -2230404 + (TCC)n Simple_repeat Simple_repeat 2 32 0 2 729 235 269 15 0 chr2R 18917492 18917559 -2229149 + (CTG)n Simple_repeat Simple_repeat 1 68 0 2 729 230 282 0 40 chr2R 18918310 18918384 -2228324 + GA-rich Low_complexity Low_complexity 3 73 0 2 729 198 0 0 0 chr2R 18919023 18919045 -2227663 + (CAG)n Simple_repeat Simple_repeat 1 22 0 2 729 203 135 0 55 chr2R 18922197 18922252 -2224456 + (TGG)n Simple_repeat Simple_repeat 2 53 0 2 729 226 220 0 17 chr2R 18922743 18922803 -2223905 + (CTGGGG)n Simple_repeat Simple_repeat 6 64 0 2 729 189 0 0 0 chr2R 18923168 18923189 -2223519 + (CAAGT)n Simple_repeat Simple_repeat 3 23 0 2 729 255 170 0 0 chr2R 18928747 18928794 -2217914 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 729 212 187 0 74 chr2R 18929440 18929521 -2217187 + T-rich Low_complexity Low_complexity 4 78 0 2 729 22 0 0 0 chr2R 18929699 18929721 -2216987 + AT_rich Low_complexity Low_complexity 1 22 0 2 729 264 122 0 0 chr2R 18930067 18930108 -2216600 + (CTG)n Simple_repeat Simple_repeat 1 41 0 2 729 22 0 0 0 chr2R 18931672 18931694 -2215014 + AT_rich Low_complexity Low_complexity 1 22 0 2 729 273 206 0 0 chr2R 18934146 18934214 -2212494 + (CAG)n Simple_repeat Simple_repeat 1 68 0 2 729 216 204 0 0 chr2R 18934353 18934397 -2212311 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 729 207 139 0 0 chr2R 18934536 18934572 -2212136 + (CAG)n Simple_repeat Simple_repeat 1 36 0 2 729 249 128 0 0 chr2R 18934734 18934781 -2211927 + (CAG)n Simple_repeat Simple_repeat 1 47 0 2 729 185 0 40 0 chr2R 18935273 18935298 -2211410 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 2 729 222 37 0 0 chr2R 18936041 18936068 -2210640 + (CGGA)n Simple_repeat Simple_repeat 3 29 0 2 729 218 125 0 35 chr2R 18936135 18936193 -2210515 + (CATATA)n Simple_repeat Simple_repeat 6 61 0 2 729 180 0 0 0 chr2R 18938452 18938472 -2208236 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 2 729 23 68 0 0 chr2R 18939399 18939443 -2207265 + AT_rich Low_complexity Low_complexity 1 44 0 2 729 24 67 0 0 chr2R 18941291 18941336 -2205372 + AT_rich Low_complexity Low_complexity 1 45 0 2 729 21 36 0 0 chr2R 18944714 18944742 -2201966 + AT_rich Low_complexity Low_complexity 1 28 0 2 729 234 231 0 0 chr2R 18955049 18955101 -2191607 + (CGTG)n Simple_repeat Simple_repeat 4 55 0 2 729 21 0 0 0 chr2R 18960191 18960212 -2186496 + AT_rich Low_complexity Low_complexity 1 21 0 2 729 202 224 0 0 chr2R 18961688 18961737 -2184971 + (CCA)n Simple_repeat Simple_repeat 3 51 0 2 729 298 243 0 33 chr2R 18961738 18961921 -2184787 + (CCG)n Simple_repeat Simple_repeat 2 178 0 2 729 208 213 0 32 chr2R 18962448 18962511 -2184197 + (TTAA)n Simple_repeat Simple_repeat 3 63 0 2 729 262 268 10 0 chr2R 18977666 18977763 -2168945 + (TATATG)n Simple_repeat Simple_repeat 4 101 0 2 729 200 233 0 0 chr2R 18983213 18983256 -2163452 + T-rich Low_complexity Low_complexity 2 44 0 2 729 24 32 0 0 chr2R 18984321 18984352 -2162356 + AT_rich Low_complexity Low_complexity 1 31 0 2 729 216 0 0 0 chr2R 18985060 18985084 -2161624 + (TATAG)n Simple_repeat Simple_repeat 2 25 0 2 729 207 0 0 0 chr2R 18987283 18987306 -2159402 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 729 31 0 0 0 chr2R 18996525 18996556 -2150152 + AT_rich Low_complexity Low_complexity 1 31 0 2 729 189 0 0 0 chr2R 18998033 18998054 -2148654 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 729 240 137 0 0 chr2R 19000762 19000813 -2145895 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 729 249 33 0 0 chr2R 19002069 19002099 -2144609 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 730 21 0 0 0 chr2R 19005918 19005939 -2140769 + AT_rich Low_complexity Low_complexity 1 21 0 2 730 21 36 0 0 chr2R 19007178 19007206 -2139502 + AT_rich Low_complexity Low_complexity 1 28 0 2 730 201 143 0 0 chr2R 19010001 19010036 -2136672 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 730 25 0 0 0 chr2R 19014826 19014851 -2131857 + AT_rich Low_complexity Low_complexity 1 25 0 2 730 218 56 28 0 chr2R 19018767 19018803 -2127905 + (GGATG)n Simple_repeat Simple_repeat 3 39 0 2 730 285 51 0 0 chr2R 19022403 19022442 -2124266 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 730 21 36 0 0 chr2R 19025081 19025109 -2121599 + AT_rich Low_complexity Low_complexity 1 28 0 2 730 189 0 0 0 chr2R 19044803 19044824 -2101884 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 730 40 67 0 0 chr2R 19049585 19049660 -2097048 + AT_rich Low_complexity Low_complexity 1 75 0 2 730 234 226 32 16 chr2R 19049956 19050019 -2096689 + (CCGAA)n Simple_repeat Simple_repeat 2 65 0 2 730 228 67 0 0 chr2R 19050177 19050207 -2096501 + (TCCA)n Simple_repeat Simple_repeat 2 31 0 2 730 231 103 0 0 chr2R 19051205 19051244 -2095464 + (TATCG)n Simple_repeat Simple_repeat 1 39 0 2 730 251 136 0 17 chr2R 19055831 19055891 -2090817 + (CTG)n Simple_repeat Simple_repeat 2 60 0 2 730 23 0 0 0 chr2R 19057523 19057546 -2089162 + AT_rich Low_complexity Low_complexity 1 23 0 2 730 21 0 0 0 chr2R 19061095 19061116 -2085592 + AT_rich Low_complexity Low_complexity 1 21 0 2 730 252 0 0 0 chr2R 19062733 19062761 -2083947 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 730 189 0 0 0 chr2R 19066548 19066569 -2080139 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2 730 228 268 12 12 chr2R 19066968 19067051 -2079657 + (CAA)n Simple_repeat Simple_repeat 2 84 0 2 730 189 0 0 0 chr2R 19067373 19067394 -2079314 + (AGGGGG)n Simple_repeat Simple_repeat 6 26 0 2 730 261 182 0 0 chr2R 19068760 19068815 -2077893 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2 730 204 125 0 0 chr2R 19070777 19070809 -2075899 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 730 214 217 43 14 chr2R 19074197 19074267 -2072441 + A-rich Low_complexity Low_complexity 1 72 0 2 730 186 43 0 0 chr2R 19074380 19074403 -2072305 + (TCC)n Simple_repeat Simple_repeat 3 25 0 2 730 192 217 0 0 chr2R 19078590 19078636 -2068072 + (TTCGGG)n Simple_repeat Simple_repeat 5 50 0 2 730 23 0 0 0 chr2R 19080026 19080049 -2066659 + AT_rich Low_complexity Low_complexity 1 23 0 2 730 198 0 0 0 chr2R 19080557 19080579 -2066129 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 730 21 57 0 0 chr2R 19100794 19100829 -2045879 + AT_rich Low_complexity Low_complexity 1 35 0 2 730 186 71 0 0 chr2R 19101923 19101951 -2044757 + (T)n Simple_repeat Simple_repeat 1 28 0 2 730 240 35 0 0 chr2R 19108507 19108536 -2038172 + (GCTG)n Simple_repeat Simple_repeat 4 32 0 2 730 26 0 0 0 chr2R 19111886 19111912 -2034796 + AT_rich Low_complexity Low_complexity 1 26 0 2 730 598 237 43 38 chr2R 19116253 19116479 -2030229 + SAR_DM Satellite Satellite 1 227 -1028 2 730 462 323 20 23 chr2R 19116544 19116845 -2029863 + SAR_DM Satellite Satellite 218 517 -955 2 730 222 304 0 0 chr2R 19118279 19118335 -2028373 + (TTCGGG)n Simple_repeat Simple_repeat 2 57 0 2 730 198 150 0 0 chr2R 19125211 19125251 -2021457 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 730 205 312 13 13 chr2R 19125408 19125486 -2021222 + (CAG)n Simple_repeat Simple_repeat 3 80 0 2 730 243 0 0 0 chr2R 19125590 19125617 -2021091 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 730 210 71 0 0 chr2R 19129606 19129634 -2017074 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 2 730 27 0 0 0 chr2R 19129772 19129799 -2016909 + AT_rich Low_complexity Low_complexity 1 27 0 2 730 216 245 0 0 chr2R 19134324 19134373 -2012335 + (TCG)n Simple_repeat Simple_repeat 2 50 0 2 731 231 88 0 0 chr2R 19139314 19139348 -2007360 + (T)n Simple_repeat Simple_repeat 1 34 0 2 731 22 0 0 0 chr2R 19146064 19146086 -2000622 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 27 29 0 0 chr2R 19147206 19147240 -1999468 + AT_rich Low_complexity Low_complexity 1 34 0 2 731 21 0 0 0 chr2R 19153092 19153113 -1993595 + AT_rich Low_complexity Low_complexity 1 21 0 2 731 21 0 0 0 chr2R 19154957 19154978 -1991730 + AT_rich Low_complexity Low_complexity 1 21 0 2 731 31 0 0 0 chr2R 19159819 19159850 -1986858 + AT_rich Low_complexity Low_complexity 1 31 0 2 731 207 0 0 0 chr2R 19162943 19162966 -1983742 + (ATG)n Simple_repeat Simple_repeat 1 23 0 2 731 210 118 0 0 chr2R 19164963 19164997 -1981711 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 731 21 0 0 0 chr2R 19166012 19166033 -1980675 + AT_rich Low_complexity Low_complexity 1 21 0 2 731 303 71 0 0 chr2R 19168401 19168443 -1978265 + (ACTG)n Simple_repeat Simple_repeat 2 43 0 2 731 207 0 0 0 chr2R 19168918 19168941 -1977767 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 731 267 54 0 0 chr2R 19169945 19169982 -1976726 + (CCAA)n Simple_repeat Simple_repeat 4 40 0 2 731 315 141 0 0 chr2R 19170757 19170821 -1975887 + (CTG)n Simple_repeat Simple_repeat 1 64 0 2 731 264 30 0 0 chr2R 19172830 19172863 -1973845 + (CCG)n Simple_repeat Simple_repeat 2 34 0 2 731 410 279 40 50 chr2R 19173291 19173612 -1973096 - SAR_DM Satellite Satellite -936 536 219 2 731 1090 282 75 24 chr2R 19173630 19174249 -1972459 - SAR_DM Satellite Satellite -594 650 1 2 731 640 249 58 44 chr2R 19174283 19174577 -1972131 - SAR_DM Satellite Satellite -610 862 565 2 731 333 47 0 0 chr2R 19183756 19183799 -1962909 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 731 216 149 0 0 chr2R 19185072 19185119 -1961589 + (CAGAG)n Simple_repeat Simple_repeat 4 50 0 2 731 291 177 0 0 chr2R 19189944 19190006 -1956702 + (CAGT)n Simple_repeat Simple_repeat 4 65 0 2 731 212 206 31 31 chr2R 19190095 19190160 -1956548 + (TTGGGG)n Simple_repeat Simple_repeat 2 66 0 2 731 24 53 0 0 chr2R 19190479 19190517 -1956191 + AT_rich Low_complexity Low_complexity 1 38 0 2 731 192 125 0 0 chr2R 19191567 19191599 -1955109 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 731 270 235 15 0 chr2R 19193346 19193414 -1953294 + (CAG)n Simple_repeat Simple_repeat 3 71 0 2 731 201 39 0 0 chr2R 19193851 19193877 -1952831 + (CTG)n Simple_repeat Simple_repeat 1 26 0 2 731 223 161 18 18 chr2R 19194372 19194429 -1952279 + (CAG)n Simple_repeat Simple_repeat 3 59 0 2 731 21 36 0 0 chr2R 19198340 19198368 -1948340 + AT_rich Low_complexity Low_complexity 1 28 0 2 731 27 62 0 0 chr2R 19203785 19203833 -1942875 + AT_rich Low_complexity Low_complexity 1 48 0 2 731 213 108 0 0 chr2R 19203988 19204025 -1942683 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 731 192 97 0 0 chr2R 19208249 19208280 -1938428 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 731 22 70 0 0 chr2R 19211225 19211268 -1935440 + AT_rich Low_complexity Low_complexity 1 43 0 2 731 219 69 0 0 chr2R 19213927 19213956 -1932752 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 731 22 35 0 0 chr2R 19216049 19216078 -1930630 + AT_rich Low_complexity Low_complexity 1 29 0 2 731 216 0 0 0 chr2R 19225228 19225252 -1921456 + (CATTC)n Simple_repeat Simple_repeat 5 28 0 2 731 276 237 0 0 chr2R 19225645 19225721 -1920987 + (CAG)n Simple_repeat Simple_repeat 3 78 0 2 731 378 154 0 0 chr2R 19229179 19229244 -1917464 - DMRP1 Unknown Unknown -242 104 40 2 731 22 0 0 0 chr2R 19239664 19239686 -1907022 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 222 289 0 0 chr2R 19240770 19240822 -1905886 + (TATG)n Simple_repeat Simple_repeat 4 55 0 2 731 188 203 0 33 chr2R 19241556 19241617 -1905091 + (CATA)n Simple_repeat Simple_repeat 3 61 0 2 731 209 171 0 0 chr2R 19246386 19246421 -1900287 + (CGG)n Simple_repeat Simple_repeat 2 36 0 2 732 22 0 0 0 chr2R 19273009 19273031 -1873677 + AT_rich Low_complexity Low_complexity 1 22 0 2 732 27 49 0 0 chr2R 19289938 19289979 -1856729 + AT_rich Low_complexity Low_complexity 1 41 0 2 732 2241 8 26 11 chr2R 19290186 19290457 -1856251 + BLASTOPIA_LTR LTR Gypsy 1 275 0 2 732 41459 2 1 0 chr2R 19290457 19294934 -1851774 + BLASTOPIA_I LTR Gypsy 1 4481 0 2 732 2241 8 26 11 chr2R 19294934 19295205 -1851503 + BLASTOPIA_LTR LTR Gypsy 1 275 0 2 732 216 0 0 0 chr2R 19297954 19297978 -1848730 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 732 186 43 0 0 chr2R 19298150 19298173 -1848535 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 732 243 175 0 0 chr2R 19300930 19300987 -1845721 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 732 285 51 0 0 chr2R 19301104 19301143 -1845565 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 732 258 106 0 0 chr2R 19309671 19309718 -1836990 + (GGA)n Simple_repeat Simple_repeat 1 47 0 2 732 207 69 0 0 chr2R 19310374 19310403 -1836305 + (GCTG)n Simple_repeat Simple_repeat 4 32 0 2 732 21 0 0 0 chr2R 19311026 19311047 -1835661 + AT_rich Low_complexity Low_complexity 1 21 0 2 732 22 80 0 0 chr2R 19317510 19317560 -1829148 + AT_rich Low_complexity Low_complexity 1 50 0 2 732 21 0 0 0 chr2R 19318898 19318919 -1827789 + AT_rich Low_complexity Low_complexity 1 21 0 2 732 21 36 0 0 chr2R 19319430 19319458 -1827250 + AT_rich Low_complexity Low_complexity 1 28 0 2 732 202 143 0 28 chr2R 19319763 19319799 -1826909 + T-rich Low_complexity Low_complexity 2 36 0 2 732 182 62 31 0 chr2R 19322851 19322883 -1823825 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 2 732 212 277 0 67 chr2R 19324752 19324841 -1821867 + GA-rich Low_complexity Low_complexity 5 87 0 2 732 337 182 0 15 chr2R 19334223 19334290 -1812418 + DNAREP1_DM LINE Penelope 529 594 0 2 732 225 159 129 14 chr2R 19334229 19334299 -1812409 - P_DG DNA P -68 2820 2743 2 732 201 39 0 0 chr2R 19337502 19337528 -1809180 + (GGA)n Simple_repeat Simple_repeat 2 27 0 2 732 232 250 0 0 chr2R 19337970 19338038 -1808670 + T-rich Low_complexity Low_complexity 1 68 0 2 732 189 0 0 0 chr2R 19339097 19339118 -1807590 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 732 186 167 0 0 chr2R 19339756 19339792 -1806916 + A-rich Low_complexity Low_complexity 1 36 0 2 732 206 226 0 16 chr2R 19341618 19341681 -1805027 + (TGGG)n Simple_repeat Simple_repeat 3 64 0 2 732 183 42 0 0 chr2R 19344859 19344883 -1801825 + (GGA)n Simple_repeat Simple_repeat 3 26 0 2 732 366 108 0 0 chr2R 19351669 19351734 -1794974 + (CAGT)n Simple_repeat Simple_repeat 4 68 0 2 732 188 100 0 24 chr2R 19353748 19353789 -1792919 + (GCTG)n Simple_repeat Simple_repeat 3 42 0 2 732 189 0 0 0 chr2R 19356151 19356172 -1790536 + (TAGA)n Simple_repeat Simple_repeat 4 24 0 2 732 214 72 0 127 chr2R 19362961 19363040 -1783668 + (CAAAG)n Simple_repeat Simple_repeat 4 72 0 2 732 22 0 0 0 chr2R 19365265 19365287 -1781421 + AT_rich Low_complexity Low_complexity 1 22 0 2 732 186 43 0 0 chr2R 19375320 19375343 -1771365 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 732 22 0 0 0 chr2R 19376215 19376237 -1770471 + AT_rich Low_complexity Low_complexity 1 22 0 2 732 204 135 27 0 chr2R 19376411 19376448 -1770260 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 732 21 36 0 0 chr2R 19377245 19377273 -1769435 + AT_rich Low_complexity Low_complexity 1 28 0 2 732 228 86 0 0 chr2R 19380296 19380331 -1766377 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 732 26 30 0 0 chr2R 19382457 19382490 -1764218 + AT_rich Low_complexity Low_complexity 1 33 0 2 732 22 0 0 0 chr2R 19388188 19388210 -1758498 + AT_rich Low_complexity Low_complexity 1 22 0 2 732 23 33 0 0 chr2R 19390063 19390093 -1756615 + AT_rich Low_complexity Low_complexity 1 30 0 2 732 230 0 33 0 chr2R 19394539 19394569 -1752139 + (GA)n Simple_repeat Simple_repeat 1 31 0 2 733 189 0 0 0 chr2R 19401804 19401825 -1744883 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 733 24 59 0 42 chr2R 19402051 19402122 -1744586 + AT_rich Low_complexity Low_complexity 1 68 0 2 733 195 42 0 0 chr2R 19405443 19405467 -1741241 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 733 195 139 0 0 chr2R 19409190 19409226 -1737482 + (CTG)n Simple_repeat Simple_repeat 2 37 0 2 733 183 80 0 0 chr2R 19410893 19410918 -1735790 + (TTG)n Simple_repeat Simple_repeat 1 25 0 2 733 61353 1 1 12 chr2R 19417151 19424670 -1722038 - DM412 LTR Gypsy 0 6897 1 2 733 195 42 0 0 chr2R 19425932 19425956 -1720752 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 2 733 21 0 0 0 chr2R 19431444 19431465 -1715243 + AT_rich Low_complexity Low_complexity 1 21 0 2 733 186 43 0 0 chr2R 19433694 19433717 -1712991 + (CACCG)n Simple_repeat Simple_repeat 1 23 0 2 733 192 40 0 0 chr2R 19433750 19433775 -1712933 + (CAGTG)n Simple_repeat Simple_repeat 3 27 0 2 733 22 0 0 0 chr2R 19439556 19439578 -1707130 + AT_rich Low_complexity Low_complexity 1 22 0 2 733 28 86 0 0 chr2R 19441294 19441364 -1705344 + AT_rich Low_complexity Low_complexity 1 70 0 2 733 44 63 0 0 chr2R 19447817 19447896 -1698812 + AT_rich Low_complexity Low_complexity 1 79 0 2 733 231 36 0 0 chr2R 19456201 19456229 -1690479 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 733 189 154 0 0 chr2R 19460838 19460877 -1685831 + CT-rich Low_complexity Low_complexity 1 39 0 2 733 183 100 0 0 chr2R 19465444 19465474 -1681234 + (TCC)n Simple_repeat Simple_repeat 3 32 0 2 733 251 246 0 0 chr2R 19467764 19467821 -1678887 + (TTGGGG)n Simple_repeat Simple_repeat 5 61 0 2 733 221 200 18 18 chr2R 19468252 19468308 -1678400 + GA-rich Low_complexity Low_complexity 2 57 0 2 733 222 37 0 0 chr2R 19470531 19470558 -1676150 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 733 396 59 0 0 chr2R 19472035 19472086 -1674622 + (CAGT)n Simple_repeat Simple_repeat 4 54 0 2 733 27 0 0 0 chr2R 19475221 19475248 -1671460 + AT_rich Low_complexity Low_complexity 1 27 0 2 733 25 0 0 0 chr2R 19475838 19475863 -1670845 + AT_rich Low_complexity Low_complexity 1 25 0 2 733 255 237 0 0 chr2R 19476731 19476790 -1669918 + (CATATA)n Simple_repeat Simple_repeat 5 63 0 2 733 189 154 0 0 chr2R 19477152 19477191 -1669517 + A-rich Low_complexity Low_complexity 1 39 0 2 733 180 0 0 0 chr2R 19477339 19477359 -1669349 + (CGTTG)n Simple_repeat Simple_repeat 3 22 0 2 733 252 59 0 0 chr2R 19478349 19478383 -1668325 + (CAGT)n Simple_repeat Simple_repeat 3 36 0 2 733 186 43 0 0 chr2R 19481449 19481472 -1665236 + (GAGTG)n Simple_repeat Simple_repeat 5 27 0 2 733 198 0 0 0 chr2R 19481639 19481661 -1665047 + (A)n Simple_repeat Simple_repeat 1 22 0 2 733 246 62 0 0 chr2R 19485625 19485657 -1661051 + (CAA)n Simple_repeat Simple_repeat 3 34 0 2 733 203 250 0 20 chr2R 19485827 19485876 -1660832 + (CAG)n Simple_repeat Simple_repeat 2 49 0 2 733 261 98 0 0 chr2R 19486058 19486099 -1660609 + (CAG)n Simple_repeat Simple_repeat 3 43 0 2 733 231 36 0 0 chr2R 19486381 19486409 -1660299 + (ATG)n Simple_repeat Simple_repeat 3 30 0 2 733 247 141 15 15 chr2R 19486426 19486491 -1660217 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 733 216 0 0 0 chr2R 19497198 19497222 -1649486 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 733 25 0 0 0 chr2R 19498419 19498444 -1648264 + AT_rich Low_complexity Low_complexity 1 25 0 2 733 224 255 0 0 chr2R 19501153 19501204 -1645504 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 733 251 28 28 0 chr2R 19503667 19503703 -1643005 + (TTA)n Simple_repeat Simple_repeat 2 38 0 2 733 180 0 0 0 chr2R 19504262 19504282 -1642426 + (ACTG)n Simple_repeat Simple_repeat 2 21 0 2 733 21 0 0 0 chr2R 19505556 19505577 -1641131 + AT_rich Low_complexity Low_complexity 1 21 0 2 733 213 39 0 0 chr2R 19508914 19508940 -1637768 + (CCA)n Simple_repeat Simple_repeat 2 27 0 2 733 215 224 0 0 chr2R 19512250 19512299 -1634409 + CT-rich Low_complexity Low_complexity 1 49 0 2 733 198 0 0 0 chr2R 19516051 19516073 -1630635 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 733 234 81 0 0 chr2R 19516916 19516953 -1629755 + (ATGGTG)n Simple_repeat Simple_repeat 4 40 0 2 733 195 42 0 0 chr2R 19517218 19517242 -1629466 + (TCG)n Simple_repeat Simple_repeat 3 26 0 2 733 214 178 0 0 chr2R 19518778 19518823 -1627885 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 2 733 228 143 0 0 chr2R 19523583 19523625 -1623083 + (GAATG)n Simple_repeat Simple_repeat 5 46 0 2 733 240 35 0 0 chr2R 19524111 19524140 -1622568 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 733 230 159 0 0 chr2R 19525320 19525364 -1621344 + T-rich Low_complexity Low_complexity 4 47 0 2 733 237 108 0 0 chr2R 19525516 19525553 -1621155 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 733 22 0 0 0 chr2R 19525932 19525954 -1620754 + AT_rich Low_complexity Low_complexity 1 22 0 2 733 250 214 18 0 chr2R 19526676 19526732 -1619976 + A-rich Low_complexity Low_complexity 1 57 0 2 734 242 207 0 0 chr2R 19530503 19530561 -1616147 + GA-rich Low_complexity Low_complexity 1 58 0 2 734 186 103 0 0 chr2R 19531440 19531469 -1615239 + (TCTCG)n Simple_repeat Simple_repeat 1 29 0 2 734 207 0 0 0 chr2R 19531508 19531531 -1615177 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 734 237 139 0 0 chr2R 19532162 19532205 -1614503 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 2 734 186 71 0 0 chr2R 19533079 19533107 -1613601 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 734 201 108 0 0 chr2R 19537230 19537267 -1609441 + (CGATG)n Simple_repeat Simple_repeat 3 39 0 2 734 492 134 0 0 chr2R 19539455 19539552 -1607156 + (CAG)n Simple_repeat Simple_repeat 1 97 0 2 734 243 61 0 0 chr2R 19541131 19541164 -1605544 + (GGA)n Simple_repeat Simple_repeat 2 34 0 2 734 277 0 0 86 chr2R 19541968 19542026 -1604682 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 734 198 91 0 0 chr2R 19542179 19542212 -1604496 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 734 180 0 0 0 chr2R 19542542 19542562 -1604146 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2 734 35 0 0 0 chr2R 19543783 19543818 -1602890 + AT_rich Low_complexity Low_complexity 1 35 0 2 734 21 0 0 0 chr2R 19544081 19544102 -1602606 + AT_rich Low_complexity Low_complexity 1 21 0 2 734 276 264 9 9 chr2R 19544856 19544967 -1601741 + (TCTCTG)n Simple_repeat Simple_repeat 6 116 0 2 734 183 156 0 0 chr2R 19547659 19547691 -1599017 + (CAA)n Simple_repeat Simple_repeat 1 32 0 2 734 258 81 0 0 chr2R 19547812 19547849 -1598859 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 734 192 200 0 0 chr2R 19548298 19548343 -1598365 + (AAATG)n Simple_repeat Simple_repeat 4 48 0 2 734 22 35 0 0 chr2R 19549859 19549888 -1596820 + AT_rich Low_complexity Low_complexity 1 29 0 2 734 189 0 0 0 chr2R 19550047 19550068 -1596640 + (CGAGT)n Simple_repeat Simple_repeat 5 25 0 2 734 270 56 0 0 chr2R 19554432 19554468 -1592240 + (TC)n Simple_repeat Simple_repeat 2 37 0 2 734 223 350 0 0 chr2R 19555485 19555565 -1591143 + (CCCGAA)n Simple_repeat Simple_repeat 2 81 0 2 734 204 182 0 0 chr2R 19556039 19556083 -1590625 + (CAGC)n Simple_repeat Simple_repeat 3 46 0 2 734 225 65 0 0 chr2R 19559833 19559864 -1586844 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 734 340 231 0 0 chr2R 19563686 19563764 -1582944 + ROO_I LTR Pao 640 717 -7539 2 734 210 154 0 25 chr2R 19564375 19564415 -1582293 + (CTCG)n Simple_repeat Simple_repeat 3 41 0 2 734 290 189 0 62 chr2R 19564425 19564521 -1582187 + A-rich Low_complexity Low_complexity 4 93 0 2 734 239 269 0 0 chr2R 19567020 19567072 -1579636 + (TTCGGG)n Simple_repeat Simple_repeat 2 53 0 2 734 243 61 0 0 chr2R 19567618 19567651 -1579057 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 734 185 114 40 54 chr2R 19568263 19568337 -1578371 + A-rich Low_complexity Low_complexity 2 74 0 2 734 27 0 0 0 chr2R 19575426 19575453 -1571255 + AT_rich Low_complexity Low_complexity 1 27 0 2 734 213 94 0 0 chr2R 19575643 19575675 -1571033 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 734 198 103 0 0 chr2R 19585060 19585089 -1561619 + (TCC)n Simple_repeat Simple_repeat 2 30 0 2 734 243 61 0 0 chr2R 19587337 19587370 -1559338 + (TGG)n Simple_repeat Simple_repeat 1 33 0 2 734 23 54 0 0 chr2R 19597479 19597516 -1549192 + AT_rich Low_complexity Low_complexity 1 37 0 2 734 603 268 41 37 chr2R 19597573 19597868 -1548840 - SAR_DM Satellite Satellite -601 871 576 2 734 25 0 0 0 chr2R 19599166 19599191 -1547517 + AT_rich Low_complexity Low_complexity 1 25 0 2 734 284 230 0 0 chr2R 19600518 19600592 -1546116 - ROO_I LTR Pao -7518 738 665 2 734 294 87 0 0 chr2R 19601349 19601395 -1545313 + (TTTCG)n Simple_repeat Simple_repeat 1 46 0 2 734 201 129 0 0 chr2R 19601830 19601861 -1544847 + (CAAAC)n Simple_repeat Simple_repeat 4 34 0 2 734 207 208 19 0 chr2R 19603769 19603822 -1542886 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 734 219 273 15 0 chr2R 19604224 19604290 -1542418 + (CAG)n Simple_repeat Simple_repeat 3 69 0 2 734 227 220 0 20 chr2R 19605595 19605646 -1541062 + (CATA)n Simple_repeat Simple_repeat 1 50 0 2 734 202 305 0 0 chr2R 19608979 19609074 -1537634 + (TATATG)n Simple_repeat Simple_repeat 4 98 0 2 734 22 0 0 0 chr2R 19609265 19609287 -1537421 + AT_rich Low_complexity Low_complexity 1 22 0 2 734 267 93 0 0 chr2R 19610093 19610136 -1536572 + (CGATA)n Simple_repeat Simple_repeat 2 44 0 2 734 216 0 0 0 chr2R 19611504 19611528 -1535180 + (TAA)n Simple_repeat Simple_repeat 2 25 0 2 734 211 312 26 0 chr2R 19620188 19620265 -1526443 + (CA)n Simple_repeat Simple_repeat 2 80 0 2 734 183 42 0 0 chr2R 19625091 19625115 -1521593 + (CTG)n Simple_repeat Simple_repeat 3 26 0 2 734 273 182 0 0 chr2R 19625338 19625393 -1521315 + (TTG)n Simple_repeat Simple_repeat 2 56 0 2 734 227 250 0 18 chr2R 19627247 19627304 -1519404 + C-rich Low_complexity Low_complexity 1 56 0 2 734 730 288 29 23 chr2R 19630366 19630735 -1515973 - SAR_DM Satellite Satellite -601 871 604 2 734 226 243 29 0 chr2R 19642272 19642342 -1504366 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 734 317 238 0 65 chr2R 19643423 19643531 -1503177 - ROO_I LTR Pao -7500 756 656 2 734 233 75 0 24 chr2R 19643600 19643641 -1503067 + (CTG)n Simple_repeat Simple_repeat 2 41 0 2 734 198 0 0 0 chr2R 19643671 19643693 -1503015 + (TGG)n Simple_repeat Simple_repeat 2 23 0 2 734 217 333 0 0 chr2R 19643755 19643875 -1502833 + (TTG)n Simple_repeat Simple_repeat 3 122 0 2 734 222 263 13 13 chr2R 19643797 19643874 -1502834 + (CTG)n Simple_repeat Simple_repeat 1 77 0 2 734 201 94 0 0 chr2R 19643966 19643998 -1502710 + (CTG)n Simple_repeat Simple_repeat 1 32 0 2 734 200 146 49 0 chr2R 19644027 19644068 -1502640 + (CTG)n Simple_repeat Simple_repeat 1 43 0 2 734 205 184 0 0 chr2R 19644122 19644160 -1502548 + (TTG)n Simple_repeat Simple_repeat 1 38 0 2 734 264 100 0 0 chr2R 19644310 19644350 -1502358 + (CTG)n Simple_repeat Simple_repeat 1 40 0 2 734 248 203 27 13 chr2R 19644671 19644746 -1501962 + (TTG)n Simple_repeat Simple_repeat 3 78 0 2 734 255 93 0 0 chr2R 19647003 19647046 -1499662 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 734 21 0 0 0 chr2R 19650729 19650750 -1495958 + AT_rich Low_complexity Low_complexity 1 21 0 2 734 189 0 0 0 chr2R 19650923 19650944 -1495764 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 734 180 77 0 0 chr2R 19651946 19651972 -1494736 + (CAGAT)n Simple_repeat Simple_repeat 4 29 0 2 734 228 86 0 0 chr2R 19653908 19653943 -1492765 + (CGAGA)n Simple_repeat Simple_repeat 2 36 0 2 734 22 56 0 0 chr2R 19656813 19656849 -1489859 + AT_rich Low_complexity Low_complexity 1 36 0 2 734 243 0 0 0 chr2R 19660727 19660754 -1485954 + (CAG)n Simple_repeat Simple_repeat 3 29 0 2 735 223 182 0 0 chr2R 19667617 19667661 -1479047 + (CAATT)n Simple_repeat Simple_repeat 3 46 0 2 735 240 35 0 0 chr2R 19668410 19668439 -1478269 + (TTG)n Simple_repeat Simple_repeat 3 31 0 2 735 30 0 0 0 chr2R 19668866 19668896 -1477812 + AT_rich Low_complexity Low_complexity 1 30 0 2 735 25 0 0 0 chr2R 19671572 19671597 -1475111 + AT_rich Low_complexity Low_complexity 1 25 0 2 735 24 32 0 0 chr2R 19676013 19676044 -1470664 + AT_rich Low_complexity Low_complexity 1 31 0 2 735 21 0 0 0 chr2R 19677515 19677536 -1469172 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 23 0 0 0 chr2R 19678147 19678170 -1468538 + AT_rich Low_complexity Low_complexity 1 23 0 2 735 33 0 0 0 chr2R 19679666 19679699 -1467009 + AT_rich Low_complexity Low_complexity 1 33 0 2 735 228 163 0 0 chr2R 19680185 19680228 -1466480 + (CAG)n Simple_repeat Simple_repeat 1 43 0 2 735 288 127 0 0 chr2R 19683997 19684052 -1462656 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 735 182 164 18 0 chr2R 19684228 19684283 -1462425 + (CAA)n Simple_repeat Simple_repeat 2 57 0 2 735 297 0 0 0 chr2R 19684426 19684459 -1462249 + (TATAG)n Simple_repeat Simple_repeat 3 35 0 2 735 203 324 0 0 chr2R 19685122 19685193 -1461515 + (CTGGGG)n Simple_repeat Simple_repeat 5 75 0 2 735 204 130 21 42 chr2R 19685714 19685762 -1460946 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 735 203 0 0 36 chr2R 19686076 19686104 -1460604 + (CAAGC)n Simple_repeat Simple_repeat 2 28 0 2 735 22 56 0 0 chr2R 19690973 19691009 -1455699 + AT_rich Low_complexity Low_complexity 1 36 0 2 735 21 0 0 0 chr2R 19691668 19691689 -1455019 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 209 203 0 45 chr2R 19694688 19694755 -1451953 + CT-rich Low_complexity Low_complexity 2 65 0 2 735 288 53 0 0 chr2R 19702835 19702873 -1443835 + (GGTTG)n Simple_repeat Simple_repeat 5 42 0 2 735 231 36 0 0 chr2R 19705365 19705393 -1441315 + (ACCG)n Simple_repeat Simple_repeat 4 31 0 2 735 224 308 0 15 chr2R 19706856 19706922 -1439786 + C-rich Low_complexity Low_complexity 2 66 0 2 735 180 0 0 0 chr2R 19707842 19707862 -1438846 + (CTG)n Simple_repeat Simple_repeat 2 21 0 2 735 273 29 0 0 chr2R 19710479 19710513 -1436195 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 735 216 0 0 0 chr2R 19715065 19715089 -1431619 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 735 210 37 0 0 chr2R 19716600 19716627 -1430081 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 735 24 0 0 0 chr2R 19716885 19716909 -1429799 + AT_rich Low_complexity Low_complexity 1 24 0 2 735 189 0 0 0 chr2R 19718882 19718903 -1427805 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 735 249 211 0 17 chr2R 19724719 19724777 -1421931 + (CAG)n Simple_repeat Simple_repeat 3 59 0 2 735 201 250 0 0 chr2R 19724957 19725005 -1421703 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 2 735 25 31 0 0 chr2R 19725346 19725378 -1421330 + AT_rich Low_complexity Low_complexity 1 32 0 2 735 29 0 0 0 chr2R 19725845 19725874 -1420834 + AT_rich Low_complexity Low_complexity 1 29 0 2 735 26 30 0 0 chr2R 19728258 19728291 -1418417 + AT_rich Low_complexity Low_complexity 1 33 0 2 735 277 265 10 10 chr2R 19733868 19733967 -1412741 + (CGA)n Simple_repeat Simple_repeat 1 99 0 2 735 28 48 0 0 chr2R 19735167 19735209 -1411499 + AT_rich Low_complexity Low_complexity 1 42 0 2 735 180 0 0 0 chr2R 19736283 19736303 -1410405 + (TCC)n Simple_repeat Simple_repeat 1 20 0 2 735 28 0 0 0 chr2R 19738748 19738776 -1407932 + AT_rich Low_complexity Low_complexity 1 28 0 2 735 231 36 0 0 chr2R 19744038 19744066 -1402642 + (CTG)n Simple_repeat Simple_repeat 1 28 0 2 735 297 135 0 0 chr2R 19751629 19751681 -1395027 + (CTG)n Simple_repeat Simple_repeat 3 54 0 2 735 185 0 0 39 chr2R 19752457 19752483 -1394225 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 735 21 0 0 0 chr2R 19753545 19753566 -1393142 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 26 0 0 0 chr2R 19757014 19757040 -1389668 + AT_rich Low_complexity Low_complexity 1 26 0 2 735 201 108 0 51 chr2R 19757855 19757894 -1388814 + (CAAAG)n Simple_repeat Simple_repeat 3 39 0 2 735 222 91 0 0 chr2R 19758646 19758679 -1388029 + (TATCG)n Simple_repeat Simple_repeat 2 34 0 2 735 180 0 0 0 chr2R 19761454 19761474 -1385234 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 735 283 204 0 28 chr2R 19763199 19763305 -1383403 + (CAA)n Simple_repeat Simple_repeat 2 104 0 2 735 3417 5 7 7 chr2R 19765305 19765719 -1380989 + DM297_LTR LTR Gypsy 1 414 0 2 735 27 62 0 0 chr2R 19765719 19765767 -1380941 + AT_rich Low_complexity Low_complexity 1 48 0 2 735 194 62 0 30 chr2R 19766565 19766598 -1380110 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2 735 23 0 0 0 chr2R 19772531 19772554 -1374154 + AT_rich Low_complexity Low_complexity 1 23 0 2 735 25 65 0 0 chr2R 19785872 19785918 -1360790 + AT_rich Low_complexity Low_complexity 1 46 0 2 736 299 256 0 0 chr2R 19792907 19792989 -1353719 + (TCG)n Simple_repeat Simple_repeat 2 83 0 2 736 189 107 0 0 chr2R 19794521 19794549 -1352159 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 736 34 24 0 0 chr2R 19794894 19794935 -1351773 + AT_rich Low_complexity Low_complexity 1 41 0 2 736 27 0 0 0 chr2R 19795071 19795098 -1351610 + AT_rich Low_complexity Low_complexity 1 27 0 2 736 225 0 0 0 chr2R 19795477 19795502 -1351206 + (A)n Simple_repeat Simple_repeat 1 25 0 2 736 182 174 22 0 chr2R 19795586 19795632 -1351076 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 736 212 305 0 33 chr2R 19796297 19796358 -1350350 + (CGTG)n Simple_repeat Simple_repeat 4 62 0 2 736 282 73 0 0 chr2R 19797738 19797779 -1348929 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 736 207 69 0 0 chr2R 19797953 19797982 -1348726 + (CAGCT)n Simple_repeat Simple_repeat 1 29 0 2 736 61469 2 1 14 chr2R 19801876 19809443 -1337265 - DM412 LTR Gypsy 0 6897 1 2 736 180 0 0 0 chr2R 19815741 19815761 -1330947 + (CTAGG)n Simple_repeat Simple_repeat 4 23 0 2 736 22 0 0 0 chr2R 19821701 19821723 -1324985 + AT_rich Low_complexity Low_complexity 1 22 0 2 736 21 0 0 0 chr2R 19823128 19823149 -1323559 + AT_rich Low_complexity Low_complexity 1 21 0 2 736 378 169 11 43 chr2R 19827439 19827532 -1319176 + RSP Satellite Satellite 22 111 -7 2 736 23 0 0 0 chr2R 19830101 19830124 -1316584 + AT_rich Low_complexity Low_complexity 1 23 0 2 736 200 137 20 0 chr2R 19830554 19830605 -1316103 + (CAATC)n Simple_repeat Simple_repeat 2 53 0 2 736 258 95 0 0 chr2R 19830617 19830659 -1316049 + (ATTCG)n Simple_repeat Simple_repeat 1 42 0 2 736 211 324 10 19 chr2R 19830740 19830844 -1315864 + (CATA)n Simple_repeat Simple_repeat 3 105 0 2 736 22 56 0 0 chr2R 19841284 19841320 -1305388 + AT_rich Low_complexity Low_complexity 1 36 0 2 736 27 29 0 0 chr2R 19850209 19850243 -1296465 + AT_rich Low_complexity Low_complexity 1 34 0 2 736 232 224 0 0 chr2R 19852604 19852653 -1294055 + C-rich Low_complexity Low_complexity 5 53 0 2 736 203 167 0 0 chr2R 19858944 19858986 -1287722 + (CAG)n Simple_repeat Simple_repeat 2 43 0 2 736 22 70 0 0 chr2R 19859734 19859777 -1286931 + AT_rich Low_complexity Low_complexity 1 43 0 2 736 25 65 0 0 chr2R 19865265 19865311 -1281397 + AT_rich Low_complexity Low_complexity 1 46 0 2 736 206 30 91 0 chr2R 19866718 19866751 -1279957 + (CAGTT)n Simple_repeat Simple_repeat 4 39 0 2 736 22 0 0 0 chr2R 19867214 19867236 -1279472 + AT_rich Low_complexity Low_complexity 1 22 0 2 736 222 62 0 0 chr2R 19867321 19867353 -1279355 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 736 242 224 0 0 chr2R 19868794 19868852 -1277856 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2 736 181 183 16 16 chr2R 19868960 19869021 -1277687 + (TATG)n Simple_repeat Simple_repeat 2 62 0 2 736 252 86 0 0 chr2R 19869319 19869354 -1277354 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 2 736 21 0 0 0 chr2R 19870687 19870708 -1276000 + AT_rich Low_complexity Low_complexity 1 21 0 2 736 225 0 0 0 chr2R 19892111 19892136 -1254572 + (T)n Simple_repeat Simple_repeat 1 25 0 2 736 300 137 0 0 chr2R 19906510 19906561 -1240147 + (GGA)n Simple_repeat Simple_repeat 2 52 0 2 736 279 177 0 0 chr2R 19906847 19906909 -1239799 + GA-rich Low_complexity Low_complexity 1 62 0 2 736 21 0 0 0 chr2R 19913843 19913864 -1232844 + AT_rich Low_complexity Low_complexity 1 21 0 2 737 21 0 0 0 chr2R 19925336 19925357 -1221351 + AT_rich Low_complexity Low_complexity 1 21 0 2 737 22 0 0 0 chr2R 19934477 19934499 -1212209 + AT_rich Low_complexity Low_complexity 1 22 0 2 737 183 80 0 0 chr2R 19945145 19945170 -1201538 + (CATA)n Simple_repeat Simple_repeat 4 28 0 2 737 25 51 0 0 chr2R 19950067 19950106 -1196602 + AT_rich Low_complexity Low_complexity 1 39 0 2 737 28 29 0 0 chr2R 19950270 19950305 -1196403 + AT_rich Low_complexity Low_complexity 1 35 0 2 737 24 53 0 0 chr2R 19952883 19952921 -1193787 + AT_rich Low_complexity Low_complexity 1 38 0 2 737 26 64 0 0 chr2R 19953516 19953563 -1193145 + AT_rich Low_complexity Low_complexity 1 47 0 2 737 28 29 0 0 chr2R 19960989 19961024 -1185684 + AT_rich Low_complexity Low_complexity 1 35 0 2 737 233 232 0 0 chr2R 19961704 19961760 -1184948 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 2 737 288 91 0 0 chr2R 19962131 19962175 -1184533 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 2 737 276 100 0 0 chr2R 19962609 19962649 -1184059 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 737 31 44 0 0 chr2R 19968239 19968284 -1178424 + AT_rich Low_complexity Low_complexity 1 45 0 2 737 238 270 32 0 chr2R 19969250 19969313 -1177395 + (TTCGGG)n Simple_repeat Simple_repeat 4 68 0 2 737 226 312 0 0 chr2R 19978170 19978250 -1168458 + GA-rich Low_complexity Low_complexity 5 84 0 2 737 38 0 0 0 chr2R 19986264 19986302 -1160406 + AT_rich Low_complexity Low_complexity 1 38 0 2 737 332 56 56 14 chr2R 19986302 19986374 -1160334 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 2 737 223 290 0 0 chr2R 19988761 19988823 -1157885 + (CGA)n Simple_repeat Simple_repeat 2 63 0 2 737 213 222 16 16 chr2R 19995904 19995968 -1150740 + (CTG)n Simple_repeat Simple_repeat 1 64 0 2 737 291 253 0 0 chr2R 20000464 20000634 -1146074 + (CTG)n Simple_repeat Simple_repeat 1 170 0 2 737 25 31 0 0 chr2R 20001415 20001447 -1145261 + AT_rich Low_complexity Low_complexity 1 32 0 2 737 21 36 0 0 chr2R 20003857 20003885 -1142823 + AT_rich Low_complexity Low_complexity 1 28 0 2 737 272 70 0 23 chr2R 20004627 20004671 -1142037 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 2 737 200 231 0 19 chr2R 20007313 20007366 -1139342 + CT-rich Low_complexity Low_complexity 2 53 0 2 737 203 270 0 45 chr2R 20014939 20015005 -1131703 + (TATATG)n Simple_repeat Simple_repeat 1 63 0 2 737 183 80 0 0 chr2R 20020201 20020226 -1126482 + (CATATA)n Simple_repeat Simple_repeat 3 27 0 2 737 26 0 0 0 chr2R 20021382 20021408 -1125300 + AT_rich Low_complexity Low_complexity 1 26 0 2 737 25 65 0 0 chr2R 20025486 20025532 -1121176 + AT_rich Low_complexity Low_complexity 1 46 0 2 737 216 67 0 0 chr2R 20028251 20028281 -1118427 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 737 245 197 0 13 chr2R 20033571 20033648 -1113060 + A-rich Low_complexity Low_complexity 2 77 0 2 737 4178 6 0 4 chr2R 20034645 20035128 -1111580 - T412LTR LTR LTR 0 481 1 2 737 58469 2 0 12 chr2R 20035018 20041999 -1104709 - DM412 LTR Gypsy 0 6897 1 2 737 4178 6 0 4 chr2R 20041683 20042166 -1104542 - T412LTR LTR LTR 0 481 1 2 737 183 146 0 0 chr2R 20043246 20043287 -1103421 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 2 737 237 204 20 0 chr2R 20044059 20044108 -1102600 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 737 243 200 0 18 chr2R 20050979 20051035 -1095673 + A-rich Low_complexity Low_complexity 6 60 0 2 738 183 139 0 0 chr2R 20055139 20055175 -1091533 + (CAG)n Simple_repeat Simple_repeat 3 38 0 2 738 231 152 0 0 chr2R 20056483 20056529 -1090179 + (CAG)n Simple_repeat Simple_repeat 1 46 0 2 738 204 158 0 0 chr2R 20064562 20064600 -1082108 + GA-rich Low_complexity Low_complexity 2 39 0 2 738 61596 2 2 1 chr2R 20064813 20072241 -1074467 - DM412 LTR Gypsy 0 6897 1 2 738 189 196 0 0 chr2R 20078804 20078855 -1067853 + (CTG)n Simple_repeat Simple_repeat 2 52 0 2 738 1669 106 23 8 chr2R 20084874 20085132 -1061576 + DNAREP1_DM LINE Penelope 1 262 -332 2 738 226 232 0 0 chr2R 20090528 20090584 -1056124 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 738 248 234 0 0 chr2R 20095089 20095153 -1051555 + (ACTG)n Simple_repeat Simple_repeat 3 66 0 2 738 182 62 31 0 chr2R 20100986 20101018 -1045690 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 738 208 91 22 22 chr2R 20105738 20105783 -1040925 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 738 414 57 0 0 chr2R 20106452 20106505 -1040203 + (CAGT)n Simple_repeat Simple_repeat 1 53 0 2 738 21 0 0 0 chr2R 20110295 20110316 -1036392 + AT_rich Low_complexity Low_complexity 1 21 0 2 738 198 71 0 0 chr2R 20114063 20114091 -1032617 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 738 225 302 0 0 chr2R 20114674 20114737 -1031971 - ROO_I LTR Pao -7489 767 705 2 738 254 29 29 0 chr2R 20117428 20117463 -1029245 + (GA)n Simple_repeat Simple_repeat 2 37 0 2 738 195 162 0 0 chr2R 20118197 20118234 -1028474 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 738 23 0 0 0 chr2R 20121745 20121768 -1024940 + AT_rich Low_complexity Low_complexity 1 23 0 2 738 24 32 0 0 chr2R 20121819 20121850 -1024858 + AT_rich Low_complexity Low_complexity 1 31 0 2 738 701 301 88 26 chr2R 20121878 20122501 -1024207 + SAR_DM Satellite Satellite 210 871 -601 2 738 303 348 6 0 chr2R 20122738 20122902 -1023806 - XDMR Unknown Unknown -196 165 1 2 738 497 301 31 27 chr2R 20122763 20123057 -1023651 + SAR_DM Satellite Satellite 577 871 -601 2 738 229 323 24 18 chr2R 20123057 20123221 -1023487 - XDMR Unknown Unknown -196 165 1 2 738 405 315 31 27 chr2R 20123082 20123376 -1023332 + SAR_DM Satellite Satellite 577 871 -601 2 738 336 335 6 0 chr2R 20123376 20123540 -1023168 - XDMR Unknown Unknown -196 165 1 2 738 354 251 88 35 chr2R 20123401 20123605 -1023103 + SAR_DM Satellite Satellite 1 214 -749 2 738 215 191 0 16 chr2R 20126783 20126847 -1019861 + CT-rich Low_complexity Low_complexity 3 65 0 2 738 286 286 0 0 chr2R 20130654 20130731 -1015977 + (CCG)n Simple_repeat Simple_repeat 3 79 0 2 738 193 39 0 89 chr2R 20134896 20134952 -1011756 + (CACAT)n Simple_repeat Simple_repeat 1 51 0 2 738 227 133 22 0 chr2R 20136361 20136406 -1010302 + (CTATA)n Simple_repeat Simple_repeat 5 50 0 2 738 234 0 0 0 chr2R 20136687 20136713 -1009995 + (TCC)n Simple_repeat Simple_repeat 2 27 0 2 738 198 0 0 0 chr2R 20146040 20146062 -1000646 + (ATTCG)n Simple_repeat Simple_repeat 5 26 0 2 738 204 67 0 0 chr2R 20147705 20147735 -998973 + (GCTG)n Simple_repeat Simple_repeat 2 31 0 2 738 227 159 14 14 chr2R 20148612 20148682 -998026 - ROO_I LTR Pao -7507 749 680 2 738 216 67 0 0 chr2R 20153887 20153917 -992791 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 2 738 24 32 0 0 chr2R 20155140 20155171 -991537 + AT_rich Low_complexity Low_complexity 1 31 0 2 738 405 258 33 13 chr2R 20158007 20158160 -988548 - XDMR Unknown Unknown -205 156 1 2 738 455 293 20 12 chr2R 20158070 20158315 -988393 + SAR_DM Satellite Satellite 625 871 -601 2 738 225 317 21 11 chr2R 20158498 20158689 -988019 + SAR_DM Satellite Satellite 578 770 -702 2 738 240 236 11 4 chr2R 20158615 20158722 -987986 - XDMR Unknown Unknown -1 360 244 2 738 282 132 0 0 chr2R 20159276 20159329 -987379 + (TTGG)n Simple_repeat Simple_repeat 1 53 0 2 738 216 111 0 0 chr2R 20159486 20159522 -987186 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 738 267 140 0 0 chr2R 20160203 20160253 -986455 + (CTG)n Simple_repeat Simple_repeat 1 50 0 2 738 253 209 0 15 chr2R 20160358 20160426 -986282 - ROO_I LTR Pao -7517 739 673 2 738 22 0 0 0 chr2R 20161225 20161247 -985461 + AT_rich Low_complexity Low_complexity 1 22 0 2 738 255 61 0 0 chr2R 20161472 20161505 -985203 + (CAG)n Simple_repeat Simple_repeat 3 35 0 2 738 237 209 0 0 chr2R 20166105 20166148 -980560 + (CGGAG)n Simple_repeat Simple_repeat 3 45 0 2 738 357 117 0 0 chr2R 20168259 20168319 -978389 + (CTG)n Simple_repeat Simple_repeat 3 62 0 2 738 192 40 0 0 chr2R 20168510 20168535 -978173 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 738 183 42 0 0 chr2R 20170578 20170602 -976106 + (CCA)n Simple_repeat Simple_repeat 2 25 0 2 738 255 31 0 0 chr2R 20170710 20170742 -975966 + (CCA)n Simple_repeat Simple_repeat 2 33 0 2 738 189 107 0 0 chr2R 20172416 20172444 -974264 + (CGG)n Simple_repeat Simple_repeat 3 30 0 2 738 184 130 0 42 chr2R 20173621 20173669 -973039 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 738 321 200 12 0 chr2R 20174368 20174453 -972255 + ROO_I LTR Pao 652 737 -7519 2 738 183 204 0 0 chr2R 20174466 20174510 -972198 + (CAT)n Simple_repeat Simple_repeat 1 44 0 2 738 225 167 0 0 chr2R 20175623 20175665 -971043 + GA-rich Low_complexity Low_complexity 5 46 0 2 738 183 100 0 0 chr2R 20175885 20175915 -970793 + (CCG)n Simple_repeat Simple_repeat 2 31 0 2 738 225 282 0 14 chr2R 20177674 20177746 -968962 + G-rich Low_complexity Low_complexity 1 71 0 2 738 183 167 0 0 chr2R 20180830 20180872 -965836 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 738 198 0 0 0 chr2R 20181463 20181485 -965223 + (CAT)n Simple_repeat Simple_repeat 2 23 0 2 738 255 61 0 0 chr2R 20181853 20181886 -964822 + (CCAA)n Simple_repeat Simple_repeat 3 35 0 2 739 270 164 16 0 chr2R 20185829 20185890 -960818 - ROO_I LTR Pao -7531 725 664 2 739 213 39 0 0 chr2R 20187039 20187065 -959643 + (CTG)n Simple_repeat Simple_repeat 3 28 0 2 739 202 97 0 31 chr2R 20187416 20187448 -959260 + (CTG)n Simple_repeat Simple_repeat 1 31 0 2 739 195 146 0 0 chr2R 20191082 20191123 -955585 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 739 192 97 0 0 chr2R 20197206 20197237 -949471 + (CATCC)n Simple_repeat Simple_repeat 3 33 0 2 739 222 214 0 0 chr2R 20203867 20203923 -942785 + T-rich Low_complexity Low_complexity 1 56 0 2 739 26 0 0 0 chr2R 20206999 20207025 -939683 + AT_rich Low_complexity Low_complexity 1 26 0 2 739 203 227 0 58 chr2R 20207356 20207459 -939249 + (GATTG)n Simple_repeat Simple_repeat 5 101 0 2 739 211 173 58 0 chr2R 20209228 20209280 -937428 + (CAG)n Simple_repeat Simple_repeat 1 55 0 2 739 21 0 0 0 chr2R 20210770 20210791 -935917 + AT_rich Low_complexity Low_complexity 1 21 0 2 739 186 43 0 0 chr2R 20211531 20211554 -935154 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 2 739 212 167 48 0 chr2R 20211658 20211700 -935008 + T-rich Low_complexity Low_complexity 4 47 0 2 739 282 29 0 0 chr2R 20212571 20212606 -934102 + (AAATG)n Simple_repeat Simple_repeat 1 35 0 2 739 251 150 17 0 chr2R 20217420 20217480 -929228 + CT-rich Low_complexity Low_complexity 2 62 0 2 739 225 0 0 0 chr2R 20218372 20218397 -928311 + (CAG)n Simple_repeat Simple_repeat 3 27 0 2 739 284 283 11 0 chr2R 20219816 20219908 -926800 + (CACG)n Simple_repeat Simple_repeat 3 95 0 2 739 264 77 0 0 chr2R 20220241 20220280 -926428 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 739 233 217 0 0 chr2R 20220390 20220436 -926272 + (CTG)n Simple_repeat Simple_repeat 1 46 0 2 739 552 106 0 0 chr2R 20221077 20221162 -925546 + (CTG)n Simple_repeat Simple_repeat 3 87 0 2 739 264 167 21 53 chr2R 20221997 20222092 -924616 + (CAAAG)n Simple_repeat Simple_repeat 4 95 0 2 739 32 0 0 0 chr2R 20223717 20223749 -922959 + AT_rich Low_complexity Low_complexity 1 32 0 2 739 24 77 0 0 chr2R 20224916 20224968 -921740 + AT_rich Low_complexity Low_complexity 1 52 0 2 739 26 50 0 0 chr2R 20224997 20225037 -921671 + AT_rich Low_complexity Low_complexity 1 40 0 2 739 21 36 0 0 chr2R 20231707 20231735 -914973 + GC_rich Low_complexity Low_complexity 1 28 0 2 739 483 112 0 0 chr2R 20231852 20231932 -914776 + (CAG)n Simple_repeat Simple_repeat 1 80 0 2 739 210 314 12 0 chr2R 20232213 20232299 -914409 + (CCCCAA)n Simple_repeat Simple_repeat 6 92 0 2 739 198 103 0 0 chr2R 20234828 20234857 -911851 + (CGATG)n Simple_repeat Simple_repeat 2 30 0 2 739 24 0 0 0 chr2R 20237692 20237716 -908992 + AT_rich Low_complexity Low_complexity 1 24 0 2 739 276 149 0 0 chr2R 20238287 20238334 -908374 + (CAACT)n Simple_repeat Simple_repeat 1 47 0 2 739 234 105 0 0 chr2R 20239361 20239399 -907309 + (CTG)n Simple_repeat Simple_repeat 3 40 0 2 739 224 226 0 16 chr2R 20239686 20239749 -906959 + (CCCCAA)n Simple_repeat Simple_repeat 1 62 0 2 739 222 105 0 0 chr2R 20239931 20239969 -906739 + (CTG)n Simple_repeat Simple_repeat 3 40 0 2 739 188 86 29 0 chr2R 20240022 20240057 -906651 + (TTTCG)n Simple_repeat Simple_repeat 5 40 0 2 739 3975 0 0 2 chr2R 20241006 20241435 -905273 + ROO_LTR LTR Pao 1 428 0 2 739 60029 1 0 0 chr2R 20241435 20248083 -898625 + ROO_I LTR Pao 1 6649 -1607 2 739 7136 4 1 0 chr2R 20248070 20248882 -897826 + ROO_I LTR Pao 7444 8256 0 2 739 4005 0 0 0 chr2R 20248882 20249310 -897398 + ROO_LTR LTR Pao 1 428 0 2 739 392 104 15 0 chr2R 20250056 20250123 -896585 + (CTG)n Simple_repeat Simple_repeat 1 68 0 2 739 210 171 0 0 chr2R 20250173 20250208 -896500 + (AACTG)n Simple_repeat Simple_repeat 5 39 0 2 739 210 143 0 0 chr2R 20251812 20251847 -894861 + (TTG)n Simple_repeat Simple_repeat 3 37 0 2 739 243 235 0 42 chr2R 20253242 20253313 -893395 + (TCCG)n Simple_repeat Simple_repeat 2 69 0 2 739 21 0 0 0 chr2R 20254444 20254465 -892243 + AT_rich Low_complexity Low_complexity 1 21 0 2 739 189 0 0 0 chr2R 20262210 20262231 -884477 + (CGAGT)n Simple_repeat Simple_repeat 3 23 0 2 739 214 179 0 0 chr2R 20262323 20262362 -884346 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 739 21 36 0 0 chr2R 20267693 20267721 -878987 + AT_rich Low_complexity Low_complexity 1 28 0 2 739 24 0 0 0 chr2R 20271357 20271381 -875327 + AT_rich Low_complexity Low_complexity 1 24 0 2 739 242 207 0 0 chr2R 20272269 20272327 -874381 + (TCG)n Simple_repeat Simple_repeat 3 60 0 2 739 189 51 77 0 chr2R 20275461 20275500 -871208 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 739 247 300 0 0 chr2R 20276232 20276312 -870396 + (CA)n Simple_repeat Simple_repeat 2 81 0 2 739 198 0 0 0 chr2R 20277263 20277285 -869423 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 2 739 255 103 0 0 chr2R 20278250 20278289 -868419 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 739 182 62 31 0 chr2R 20279706 20279738 -866970 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 739 186 103 0 0 chr2R 20286469 20286498 -860210 + (CTG)n Simple_repeat Simple_repeat 3 31 0 2 739 204 234 0 0 chr2R 20289411 20289458 -857250 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 739 246 245 0 64 chr2R 20291665 20291774 -854934 + GA-rich Low_complexity Low_complexity 3 104 0 2 739 26 0 0 0 chr2R 20292023 20292049 -854659 + AT_rich Low_complexity Low_complexity 1 26 0 2 739 219 88 0 0 chr2R 20292727 20292761 -853947 + (ATG)n Simple_repeat Simple_repeat 1 34 0 2 739 282 345 0 0 chr2R 20302460 20302628 -844080 + (CCG)n Simple_repeat Simple_repeat 2 169 0 2 739 212 189 0 0 chr2R 20314699 20314736 -831972 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2 739 201 39 0 0 chr2R 20315614 20315640 -831068 + (ATTCG)n Simple_repeat Simple_repeat 1 26 0 2 740 21 0 0 0 chr2R 20323025 20323046 -823662 + AT_rich Low_complexity Low_complexity 1 21 0 2 740 204 97 0 0 chr2R 20324937 20324968 -821740 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 740 204 97 0 0 chr2R 20325975 20326006 -820702 + (AGTTG)n Simple_repeat Simple_repeat 2 32 0 2 740 218 146 0 47 chr2R 20332690 20332733 -813975 + (CGGGG)n Simple_repeat Simple_repeat 3 43 0 2 740 21 57 0 0 chr2R 20339857 20339892 -806816 + AT_rich Low_complexity Low_complexity 1 35 0 2 740 213 108 0 0 chr2R 20345579 20345616 -801092 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 740 21 0 0 0 chr2R 20348894 20348915 -797793 + AT_rich Low_complexity Low_complexity 1 21 0 2 740 23 0 0 0 chr2R 20350207 20350230 -796478 + AT_rich Low_complexity Low_complexity 1 23 0 2 740 27 29 0 0 chr2R 20351523 20351557 -795151 + AT_rich Low_complexity Low_complexity 1 34 0 2 740 206 250 0 0 chr2R 20352884 20352932 -793776 + (CAA)n Simple_repeat Simple_repeat 3 50 0 2 740 306 237 4 10 chr2R 20355954 20356053 -790655 - XDMR_DM Unknown Unknown -263 98 1 2 740 24 32 0 0 chr2R 20362697 20362728 -783980 + AT_rich Low_complexity Low_complexity 1 31 0 2 740 258 95 0 0 chr2R 20364670 20364712 -781996 + (ATTCG)n Simple_repeat Simple_repeat 4 45 0 2 740 21 0 0 0 chr2R 20365652 20365673 -781035 + AT_rich Low_complexity Low_complexity 1 21 0 2 740 204 97 0 0 chr2R 20368313 20368344 -778364 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 740 21 0 0 0 chr2R 20373361 20373382 -773326 + AT_rich Low_complexity Low_complexity 1 21 0 2 740 238 289 0 0 chr2R 20374487 20374570 -772138 + (CCA)n Simple_repeat Simple_repeat 1 83 0 2 740 30 27 0 0 chr2R 20378349 20378386 -768322 + AT_rich Low_complexity Low_complexity 1 37 0 2 740 21 0 0 0 chr2R 20380280 20380301 -766407 + AT_rich Low_complexity Low_complexity 1 21 0 2 740 22 0 0 0 chr2R 20395210 20395232 -751476 + AT_rich Low_complexity Low_complexity 1 22 0 2 740 240 143 0 0 chr2R 20402498 20402540 -744168 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 740 253 198 69 11 chr2R 20411183 20411270 -735438 + T-rich Low_complexity Low_complexity 2 93 0 2 740 183 80 0 0 chr2R 20425959 20425984 -720724 + (CGAGT)n Simple_repeat Simple_repeat 3 27 0 2 740 285 51 0 0 chr2R 20426562 20426601 -720107 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 740 234 105 0 0 chr2R 20427853 20427891 -718817 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 740 273 146 0 0 chr2R 20427983 20428031 -718677 + (CAA)n Simple_repeat Simple_repeat 1 48 0 2 740 204 40 0 0 chr2R 20428026 20428051 -718657 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 2 740 21 0 0 0 chr2R 20430295 20430316 -716392 + AT_rich Low_complexity Low_complexity 1 21 0 2 740 225 0 0 0 chr2R 20431246 20431271 -715437 + (CATCG)n Simple_repeat Simple_repeat 5 29 0 2 740 474 120 0 0 chr2R 20432557 20432632 -714076 + (CTG)n Simple_repeat Simple_repeat 1 75 0 2 740 219 88 0 0 chr2R 20442210 20442244 -704464 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 740 21 0 0 0 chr2R 20444239 20444260 -702448 + AT_rich Low_complexity Low_complexity 1 21 0 2 740 224 0 0 61 chr2R 20444313 20444346 -702362 + (ATG)n Simple_repeat Simple_repeat 1 31 0 2 740 363 121 0 0 chr2R 20444622 20444680 -702028 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 740 287 113 19 0 chr2R 20446095 20446148 -700560 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2 741 229 240 21 10 chr2R 20448719 20448816 -697892 + (TTA)n Simple_repeat Simple_repeat 3 100 0 2 741 186 43 0 0 chr2R 20454095 20454118 -692590 + (ATG)n Simple_repeat Simple_repeat 3 25 0 2 741 219 372 0 0 chr2R 20458891 20458969 -687739 + (CCG)n Simple_repeat Simple_repeat 2 79 0 2 741 27 0 0 0 chr2R 20467486 20467513 -679195 + AT_rich Low_complexity Low_complexity 1 27 0 2 741 44 35 0 0 chr2R 20467556 20467614 -679094 + AT_rich Low_complexity Low_complexity 1 58 0 2 741 24 0 0 0 chr2R 20468311 20468335 -678373 + AT_rich Low_complexity Low_complexity 1 24 0 2 741 207 100 0 0 chr2R 20469244 20469274 -677434 + (CAG)n Simple_repeat Simple_repeat 2 31 0 2 741 198 0 0 0 chr2R 20475362 20475384 -671324 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 741 183 100 0 0 chr2R 20478644 20478674 -668034 + (CATCC)n Simple_repeat Simple_repeat 1 30 0 2 741 21 0 0 0 chr2R 20481633 20481654 -665054 + AT_rich Low_complexity Low_complexity 1 21 0 2 741 22 0 0 0 chr2R 20488527 20488549 -658159 + AT_rich Low_complexity Low_complexity 1 22 0 2 741 24 0 0 0 chr2R 20494657 20494681 -652027 + AT_rich Low_complexity Low_complexity 1 24 0 2 741 207 100 0 0 chr2R 20502098 20502128 -644580 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 741 201 74 0 0 chr2R 20505091 20505118 -641590 + (TTTTTG)n Simple_repeat Simple_repeat 6 32 0 2 741 198 91 0 0 chr2R 20507421 20507454 -639254 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 741 26 30 0 0 chr2R 20511110 20511143 -635565 + AT_rich Low_complexity Low_complexity 1 33 0 2 741 259 350 0 0 chr2R 20511452 20511555 -635153 + (CTG)n Simple_repeat Simple_repeat 1 103 0 2 741 180 125 0 0 chr2R 20511723 20511755 -634953 + (CTG)n Simple_repeat Simple_repeat 3 34 0 2 741 464 260 22 11 chr2R 20513389 20513568 -633140 + SAR_DM Satellite Satellite 625 805 -667 2 741 421 223 14 21 chr2R 20513449 20513591 -633117 - XDMR_DM Unknown Unknown -1 359 219 2 741 180 0 0 0 chr2R 20514404 20514424 -632284 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 741 21 0 0 0 chr2R 20516197 20516218 -630490 + AT_rich Low_complexity Low_complexity 1 21 0 2 741 22 35 0 0 chr2R 20517761 20517790 -628918 + AT_rich Low_complexity Low_complexity 1 29 0 2 741 21 0 0 0 chr2R 20518361 20518382 -628326 + AT_rich Low_complexity Low_complexity 1 21 0 2 741 387 41 0 0 chr2R 20522200 20522249 -624459 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 741 198 150 0 0 chr2R 20523350 20523390 -623318 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 741 22 35 0 0 chr2R 20531211 20531240 -615468 + AT_rich Low_complexity Low_complexity 1 29 0 2 741 61439 2 1 9 chr2R 20535162 20542666 -604042 - DM412 LTR Gypsy 0 6897 1 2 741 202 228 0 17 chr2R 20543614 20543672 -603036 + GA-rich Low_complexity Low_complexity 2 58 0 2 741 24 32 0 0 chr2R 20558903 20558934 -587774 + AT_rich Low_complexity Low_complexity 1 31 0 2 741 234 169 24 61 chr2R 20561121 20561203 -585505 + (TGGG)n Simple_repeat Simple_repeat 2 80 0 2 741 264 59 0 0 chr2R 20562125 20562159 -584549 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 741 186 191 0 0 chr2R 20569839 20569881 -576827 + (TTG)n Simple_repeat Simple_repeat 1 42 0 2 741 198 71 0 0 chr2R 20570109 20570137 -576571 + (CACTC)n Simple_repeat Simple_repeat 4 31 0 2 741 22 0 0 0 chr2R 20571686 20571708 -575000 + AT_rich Low_complexity Low_complexity 1 22 0 2 741 180 0 0 0 chr2R 20572194 20572214 -574494 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 2 742 260 123 13 40 chr2R 20583791 20583867 -562841 + T-rich Low_complexity Low_complexity 6 79 0 2 742 29 28 0 0 chr2R 20584305 20584341 -562367 + AT_rich Low_complexity Low_complexity 1 36 0 2 742 207 182 0 0 chr2R 20585472 20585516 -561192 + (TTCGGG)n Simple_repeat Simple_repeat 4 47 0 2 742 207 78 39 19 chr2R 20585578 20585630 -561078 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 742 28 29 0 0 chr2R 20586377 20586412 -560296 + AT_rich Low_complexity Low_complexity 1 35 0 2 742 231 175 12 70 chr2R 20586426 20586512 -560196 + T-rich Low_complexity Low_complexity 4 84 0 2 742 258 274 0 0 chr2R 20589035 20589108 -557600 - XDMR_DM Unknown Unknown -286 74 2 2 742 500 276 121 50 chr2R 20589052 20589514 -557194 + SAR_DM Satellite Satellite 628 1122 -350 2 742 333 104 73 61 chr2R 20589457 20589539 -557169 - XDMR Unknown Unknown -1 360 278 2 742 22 0 0 0 chr2R 20589885 20589907 -556801 + AT_rich Low_complexity Low_complexity 1 22 0 2 742 444 67 0 0 chr2R 20593125 20593185 -553523 + (GCTG)n Simple_repeat Simple_repeat 4 63 0 2 742 192 77 0 0 chr2R 20593257 20593283 -553425 + (CAGGC)n Simple_repeat Simple_repeat 4 29 0 2 742 312 70 0 0 chr2R 20600375 20600418 -546290 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 742 233 204 0 20 chr2R 20600770 20600820 -545888 + C-rich Low_complexity Low_complexity 2 50 0 2 742 206 237 0 17 chr2R 20604497 20604557 -542151 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 742 189 197 0 0 chr2R 20609291 20609352 -537356 + CT-rich Low_complexity Low_complexity 3 63 0 2 742 279 191 0 0 chr2R 20613246 20613314 -533394 + (TCTCTG)n Simple_repeat Simple_repeat 3 70 0 2 742 229 182 0 0 chr2R 20613322 20613366 -533342 + (CTG)n Simple_repeat Simple_repeat 3 46 0 2 742 348 216 0 0 chr2R 20613925 20614027 -532681 - ROO_I LTR Pao -7514 742 641 2 742 180 77 0 0 chr2R 20615072 20615098 -531610 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 742 423 100 0 0 chr2R 20615477 20615547 -531161 + (TAA)n Simple_repeat Simple_repeat 3 72 0 2 742 3025 14 0 0 chr2R 20615547 20615903 -530805 + MDG1_LTR LTR Gypsy 87 442 0 2 742 55197 6 6 1 chr2R 20615903 20622482 -524226 + MDG1_I LTR Gypsy 1 6799 -98 2 742 423 100 0 0 chr2R 20622486 20622556 -524152 + (TAA)n Simple_repeat Simple_repeat 3 72 0 2 742 3025 14 0 0 chr2R 20622556 20622912 -523796 + MDG1_LTR LTR Gypsy 87 442 0 2 742 198 191 0 0 chr2R 20623313 20623360 -523348 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 742 209 213 0 0 chr2R 20625918 20625965 -520743 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 742 201 152 0 0 chr2R 20626057 20626090 -520618 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 742 180 97 0 0 chr2R 20626866 20626897 -519811 + (CGAAA)n Simple_repeat Simple_repeat 3 33 0 2 742 180 125 0 0 chr2R 20626895 20626927 -519781 + (CGGAG)n Simple_repeat Simple_repeat 3 34 0 2 742 207 200 0 0 chr2R 20628363 20628408 -518300 + (CCAA)n Simple_repeat Simple_repeat 3 47 0 2 742 235 262 0 0 chr2R 20629306 20629367 -517341 + CT-rich Low_complexity Low_complexity 2 62 0 2 742 23 0 0 0 chr2R 20630238 20630261 -516447 + AT_rich Low_complexity Low_complexity 1 23 0 2 742 183 80 0 0 chr2R 20631848 20631873 -514835 + (CAA)n Simple_repeat Simple_repeat 2 26 0 2 742 262 278 0 0 chr2R 20632205 20632277 -514431 + (CAA)n Simple_repeat Simple_repeat 1 72 0 2 742 252 0 0 0 chr2R 20638732 20638760 -507948 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 742 21 0 0 0 chr2R 20644520 20644541 -502167 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 16681 6 0 2 chr2R 20651188 20653106 -493602 + G2_DM LINE Jockey 1184 3098 -4 2 742 201 283 0 16 chr2R 20657504 20657565 -489143 + G-rich Low_complexity Low_complexity 3 62 0 2 742 186 43 0 0 chr2R 20658045 20658068 -488640 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 742 28 29 0 0 chr2R 20662876 20662911 -483797 + AT_rich Low_complexity Low_complexity 1 35 0 2 742 35 24 0 0 chr2R 20673020 20673062 -473646 + AT_rich Low_complexity Low_complexity 1 42 0 2 742 231 88 0 0 chr2R 20677506 20677540 -469168 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 2 742 180 111 0 0 chr2R 20678167 20678194 -468514 + (AGCTG)n Simple_repeat Simple_repeat 1 27 0 2 742 25 0 0 0 chr2R 20683329 20683354 -463354 + AT_rich Low_complexity Low_complexity 1 25 0 2 742 221 216 0 0 chr2R 20694182 20694219 -452489 + (CTGGGG)n Simple_repeat Simple_repeat 4 40 0 2 742 200 260 20 0 chr2R 20694666 20694716 -451992 + G-rich Low_complexity Low_complexity 2 52 0 2 742 224 59 0 29 chr2R 20695023 20695058 -451650 + (CAG)n Simple_repeat Simple_repeat 2 35 0 2 742 253 194 0 46 chr2R 20695618 20695683 -451025 + (CAG)n Simple_repeat Simple_repeat 1 62 0 2 742 195 42 0 0 chr2R 20697190 20697214 -449494 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 742 21 0 0 0 chr2R 20697569 20697590 -449118 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 207 200 0 0 chr2R 20698133 20698168 -448540 + (CAA)n Simple_repeat Simple_repeat 3 37 0 2 742 180 0 0 0 chr2R 20698668 20698688 -448020 + (TTA)n Simple_repeat Simple_repeat 3 22 0 2 742 215 224 0 0 chr2R 20701407 20701456 -445252 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 742 231 125 0 0 chr2R 20702487 20702527 -444181 + (ATTTG)n Simple_repeat Simple_repeat 3 42 0 2 742 218 229 0 32 chr2R 20706762 20706825 -439883 + (CAGAGA)n Simple_repeat Simple_repeat 4 64 0 2 743 21 36 0 0 chr2R 20709836 20709864 -436844 + AT_rich Low_complexity Low_complexity 1 28 0 2 743 297 109 0 0 chr2R 20710935 20710981 -435727 + (CAG)n Simple_repeat Simple_repeat 2 47 0 2 743 228 86 0 0 chr2R 20711259 20711294 -435414 + (CAG)n Simple_repeat Simple_repeat 3 37 0 2 743 26 0 0 0 chr2R 20712424 20712450 -434258 + AT_rich Low_complexity Low_complexity 1 26 0 2 743 189 107 0 0 chr2R 20714005 20714033 -432675 + (CTG)n Simple_repeat Simple_repeat 1 28 0 2 743 208 211 0 0 chr2R 20716375 20716413 -430295 + (CTG)n Simple_repeat Simple_repeat 3 40 0 2 743 276 231 0 0 chr2R 20717170 20717235 -429473 + CT-rich Low_complexity Low_complexity 4 68 0 2 743 23 33 0 0 chr2R 20723156 20723186 -423522 + AT_rich Low_complexity Low_complexity 1 30 0 2 743 202 307 21 49 chr2R 20724603 20724747 -421961 + (CCCCAG)n Simple_repeat Simple_repeat 5 144 0 2 743 204 135 0 0 chr2R 20729553 20729590 -417118 + (GGAGAA)n Simple_repeat Simple_repeat 1 37 0 2 743 26 30 0 0 chr2R 20731156 20731189 -415519 + AT_rich Low_complexity Low_complexity 1 33 0 2 743 24 53 0 0 chr2R 20731805 20731843 -414865 + AT_rich Low_complexity Low_complexity 1 38 0 2 743 189 0 0 0 chr2R 20732629 20732650 -414058 + (TCC)n Simple_repeat Simple_repeat 1 21 0 2 743 233 293 0 0 chr2R 20733815 20733897 -412811 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 2 743 225 279 0 0 chr2R 20733989 20734068 -412640 + (CCCCAA)n Simple_repeat Simple_repeat 4 82 0 2 743 206 222 0 0 chr2R 20739674 20739719 -406989 + G-rich Low_complexity Low_complexity 6 50 0 2 743 238 259 0 0 chr2R 20742979 20743037 -403671 + CT-rich Low_complexity Low_complexity 3 60 0 2 743 25 31 0 0 chr2R 20744133 20744165 -402543 + AT_rich Low_complexity Low_complexity 1 32 0 2 743 26 30 0 0 chr2R 20745023 20745056 -401652 + AT_rich Low_complexity Low_complexity 1 33 0 2 743 212 179 0 0 chr2R 20745670 20745709 -400999 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 2 743 251 106 0 41 chr2R 20750215 20750264 -396444 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 2 743 249 33 0 0 chr2R 20756575 20756605 -390103 + (GGATG)n Simple_repeat Simple_repeat 2 31 0 2 743 21 0 0 0 chr2R 20763444 20763465 -383243 + AT_rich Low_complexity Low_complexity 1 21 0 2 743 180 0 0 0 chr2R 20764927 20764947 -381761 + (GGAAA)n Simple_repeat Simple_repeat 2 21 0 2 743 204 205 0 0 chr2R 20767528 20767567 -379141 + (CCCCAA)n Simple_repeat Simple_repeat 6 44 0 2 743 219 170 0 0 chr2R 20767770 20767817 -378891 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 743 21 0 0 0 chr2R 20768659 20768680 -378028 + AT_rich Low_complexity Low_complexity 1 21 0 2 743 23 0 0 0 chr2R 20777345 20777368 -369340 + AT_rich Low_complexity Low_complexity 1 23 0 2 743 204 397 0 0 chr2R 20786041 20786177 -360531 + (CGG)n Simple_repeat Simple_repeat 3 138 0 2 743 218 313 0 0 chr2R 20804852 20804959 -341749 + C-rich Low_complexity Low_complexity 1 107 0 2 743 195 146 0 0 chr2R 20805716 20805757 -340951 + (CAG)n Simple_repeat Simple_repeat 3 43 0 2 743 268 156 0 0 chr2R 20806754 20806799 -339909 + PROTOP_B DNA P 1 45 -1108 2 743 200 214 18 18 chr2R 20818791 20818848 -327860 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 743 231 250 0 0 chr2R 20820284 20820332 -326376 + G-rich Low_complexity Low_complexity 6 53 0 2 743 24 32 0 0 chr2R 20832430 20832461 -314247 + AT_rich Low_complexity Low_complexity 1 31 0 2 743 22 56 0 0 chr2R 20839538 20839574 -307134 + AT_rich Low_complexity Low_complexity 1 36 0 2 744 244 271 8 41 chr2R 20843525 20843648 -303060 + (TTG)n Simple_repeat Simple_repeat 1 119 0 2 744 23 68 0 0 chr2R 20847358 20847402 -299306 + AT_rich Low_complexity Low_complexity 1 44 0 2 744 207 179 0 0 chr2R 20848160 20848199 -298509 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 2 744 211 128 0 60 chr2R 20851746 20851796 -294912 + T-rich Low_complexity Low_complexity 2 48 0 2 744 25 0 0 0 chr2R 20853567 20853592 -293116 + AT_rich Low_complexity Low_complexity 1 25 0 2 744 23 33 0 0 chr2R 20854882 20854912 -291796 + AT_rich Low_complexity Low_complexity 1 30 0 2 744 23 33 0 0 chr2R 20855039 20855069 -291639 + AT_rich Low_complexity Low_complexity 1 30 0 2 744 26 0 0 0 chr2R 20857146 20857172 -289536 + AT_rich Low_complexity Low_complexity 1 26 0 2 744 264 30 0 0 chr2R 20863565 20863598 -283110 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 744 24 0 0 0 chr2R 20868495 20868519 -278189 + AT_rich Low_complexity Low_complexity 1 24 0 2 744 195 100 0 0 chr2R 20879100 20879130 -267578 + (CGAAA)n Simple_repeat Simple_repeat 2 31 0 2 744 24 53 0 0 chr2R 20881472 20881510 -265198 + AT_rich Low_complexity Low_complexity 1 38 0 2 744 24 0 0 0 chr2R 20881848 20881872 -264836 + AT_rich Low_complexity Low_complexity 1 24 0 2 744 22 56 0 0 chr2R 20886059 20886095 -260613 + AT_rich Low_complexity Low_complexity 1 36 0 2 744 25 0 0 0 chr2R 20886830 20886855 -259853 + AT_rich Low_complexity Low_complexity 1 25 0 2 744 207 213 21 0 chr2R 20899943 20899990 -246718 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 744 28 79 0 0 chr2R 20917171 20917234 -229474 + AT_rich Low_complexity Low_complexity 1 63 0 2 744 26 0 0 0 chr2R 20917632 20917658 -229050 + AT_rich Low_complexity Low_complexity 1 26 0 2 744 22 35 0 0 chr2R 20922960 20922989 -223719 + AT_rich Low_complexity Low_complexity 1 29 0 2 744 26 30 0 0 chr2R 20926250 20926283 -220425 + AT_rich Low_complexity Low_complexity 1 33 0 2 744 23 33 0 0 chr2R 20927444 20927474 -219234 + AT_rich Low_complexity Low_complexity 1 30 0 2 744 21 36 0 0 chr2R 20928019 20928047 -218661 + AT_rich Low_complexity Low_complexity 1 28 0 2 744 24 0 0 0 chr2R 20937537 20937561 -209147 + AT_rich Low_complexity Low_complexity 1 24 0 2 744 1388 40 23 6 chr2R 20939201 20939377 -207331 - G5A_DM LINE Jockey 0 2841 2663 2 744 23 0 0 0 chr2R 20958625 20958648 -188060 + AT_rich Low_complexity Low_complexity 1 23 0 2 744 22 35 0 0 chr2R 20961362 20961391 -185317 + AT_rich Low_complexity Low_complexity 1 29 0 2 744 22 0 0 0 chr2R 20961515 20961537 -185171 + AT_rich Low_complexity Low_complexity 1 22 0 2 744 34 55 0 0 chr2R 20967640 20967695 -179013 + AT_rich Low_complexity Low_complexity 1 55 0 2 745 537 84 50 0 chr2R 20972738 20972857 -173851 + (TA)n Simple_repeat Simple_repeat 1 125 0 2 745 36 0 0 0 chr2R 20972857 20972893 -173815 + AT_rich Low_complexity Low_complexity 1 36 0 2 745 21 0 0 0 chr2R 20973407 20973428 -173280 + AT_rich Low_complexity Low_complexity 1 21 0 2 745 22 0 0 0 chr2R 20973903 20973925 -172783 + AT_rich Low_complexity Low_complexity 1 22 0 2 745 203 178 0 62 chr2R 20974929 20974977 -171731 + CT-rich Low_complexity Low_complexity 1 45 0 2 745 1494 173 93 88 chr2R 20976461 20977173 -169535 + DNAREP1_DM LINE Penelope 2 594 0 2 745 6313 64 36 6 chr2R 20977378 20978207 -168501 + FB4_DM DNA Tc1 1110 1963 -2126 2 745 1412 46 0 10 chr2R 20978206 20978403 -168305 + FB4_DM DNA Tc1 2562 2756 -1333 2 745 22 0 0 0 chr2R 20979254 20979276 -167432 + AT_rich Low_complexity Low_complexity 1 22 0 2 745 336 199 236 8 chr2R 20985251 20985378 -161330 - DNAREP1_DM LINE Penelope -438 156 1 2 745 26 0 0 0 chr2R 20986449 20986475 -160233 + AT_rich Low_complexity Low_complexity 1 26 0 2 745 24 0 0 0 chr2R 20991913 20991937 -154771 + AT_rich Low_complexity Low_complexity 1 24 0 2 745 26 30 0 0 chr2R 20992794 20992827 -153881 + AT_rich Low_complexity Low_complexity 1 33 0 2 745 1511 116 65 35 chr2R 20994577 20994837 -151871 + DNAREP1_DM LINE Penelope 327 594 0 2 745 203 338 0 0 chr2R 20998034 20998102 -148606 + (CAG)n Simple_repeat Simple_repeat 1 68 0 2 745 213 39 0 0 chr2R 21001947 21001973 -144735 + (TC)n Simple_repeat Simple_repeat 2 27 0 2 745 293 277 12 0 chr2R 21004744 21004827 -141881 - DNAREP1_DM LINE Penelope -9 585 502 2 745 225 200 18 0 chr2R 21004923 21004978 -141730 + XDMR Unknown Unknown 271 326 -35 2 745 21 0 0 0 chr2R 21006267 21006288 -140420 + AT_rich Low_complexity Low_complexity 1 21 0 2 745 228 156 22 0 chr2R 21010902 21010947 -135761 + PROTOP_B DNA P 10 55 -1098 2 745 1377 100 13 31 chr2R 21018692 21018920 -127788 - DNAREP1_DM LINE Penelope -370 224 1 2 745 1021 159 50 72 chr2R 21020399 21020676 -126032 - DNAREP1_DM LINE Penelope -321 273 3 2 745 24 53 0 0 chr2R 21026114 21026152 -120556 + AT_rich Low_complexity Low_complexity 1 38 0 2 745 3879 2 0 0 chr2R 21029228 21029652 -117056 + ROO_LTR LTR Pao 1 424 -4 2 745 58237 1 3 0 chr2R 21029655 21036216 -110492 + ROO_I LTR Pao 1 6579 -1677 2 745 5247 20 0 1 chr2R 21036216 21036865 -109843 + ROO_I LTR Pao 7609 8256 0 2 745 3820 14 0 0 chr2R 21036865 21037293 -109415 + ROO_LTR LTR Pao 1 428 0 2 745 7397 3 5 97 chr2R 21037293 21038319 -108389 + ROO_I LTR Pao 1 932 -7324 2 745 71185 0 19 0 chr2R 21038332 21046432 -100276 + ROO_I LTR Pao 1 8256 0 2 745 3915 2 0 0 chr2R 21046432 21046860 -99848 + ROO_LTR LTR Pao 1 428 0 2 745 28 29 0 0 chr2R 21047166 21047201 -99507 + AT_rich Low_complexity Low_complexity 1 35 0 2 745 21 0 0 0 chr2R 21048802 21048823 -97885 + AT_rich Low_complexity Low_complexity 1 21 0 2 745 214 256 0 12 chr2R 21052433 21052516 -94192 + (TATAA)n Simple_repeat Simple_repeat 1 82 0 2 745 32 0 0 0 chr2R 21053914 21053946 -92762 + AT_rich Low_complexity Low_complexity 1 32 0 2 745 26 0 0 0 chr2R 21054246 21054272 -92436 + AT_rich Low_complexity Low_complexity 1 26 0 2 745 38 39 0 0 chr2R 21054526 21054578 -92130 + AT_rich Low_complexity Low_complexity 1 52 0 2 745 26 74 0 0 chr2R 21057275 21057329 -89379 + AT_rich Low_complexity Low_complexity 1 54 0 2 745 27 49 0 0 chr2R 21059833 21059874 -86834 + AT_rich Low_complexity Low_complexity 1 41 0 2 745 470 140 447 0 chr2R 21060466 21060594 -86114 + DNAREP1_DM LINE Penelope 1 185 -409 2 745 1611 65 65 0 chr2R 21060585 21060801 -85907 + DNAREP1_DM LINE Penelope 365 594 0 2 745 264 258 0 0 chr2R 21062218 21062280 -84428 + DNAREP1_DM LINE Penelope 432 493 -101 2 745 348 252 39 0 chr2R 21062332 21062435 -84273 + DNAREP1_DM LINE Penelope 4 110 -484 2 745 362 152 68 107 chr2R 21062444 21062547 -84161 + DNAREP1_DM LINE Penelope 367 465 -129 2 745 21 0 0 0 chr2R 21065460 21065481 -81227 + AT_rich Low_complexity Low_complexity 1 21 0 2 745 642 67 39 0 chr2R 21065775 21065879 -80829 - DNAREP1_DM LINE Penelope 0 594 487 2 745 2495 47 26 6 chr2R 21065870 21066214 -80494 - FB4_DM DNA Tc1 -2633 1456 1106 2 745 549 162 18 45 chr2R 21066338 21066448 -80260 + DNAREP1_DM LINE Penelope 371 477 -117 2 745 665 160 6 31 chr2R 21070040 21070201 -76507 - DNAREP1_DM LINE Penelope -336 258 102 2 745 315 164 0 0 chr2R 21070213 21070268 -76440 - DNAREP1_DM LINE Penelope -539 55 1 2 745 22 35 0 0 chr2R 21071790 21071819 -74889 + AT_rich Low_complexity Low_complexity 1 29 0 2 745 27 62 0 0 chr2R 21073293 21073341 -73367 + AT_rich Low_complexity Low_complexity 1 48 0 2 745 31 26 0 0 chr2R 21076470 21076508 -70200 + AT_rich Low_complexity Low_complexity 1 38 0 2 745 1901 164 105 102 chr2R 21076508 21077099 -69609 + DNAREP1_DM LINE Penelope 1 593 -1 2 745 21 71 0 0 chr2R 21077336 21077378 -69330 + AT_rich Low_complexity Low_complexity 1 42 0 2 745 282 151 19 0 chr2R 21080117 21080170 -66538 - DNAREP1_DM LINE Penelope -12 582 529 2 745 24 32 0 0 chr2R 21081025 21081056 -65652 + AT_rich Low_complexity Low_complexity 1 31 0 2 745 23 0 0 0 chr2R 21081302 21081325 -65383 + AT_rich Low_complexity Low_complexity 1 23 0 2 745 22 80 0 0 chr2R 21082083 21082133 -64575 + AT_rich Low_complexity Low_complexity 1 50 0 2 745 1672 112 48 28 chr2R 21083513 21083867 -62841 + DNAREP1_DM LINE Penelope 1 490 -104 2 745 575 202 98 40 chr2R 21083964 21084152 -62556 + DNAREP1_DM LINE Penelope 78 398 -196 2 745 380 93 0 0 chr2R 21084209 21084263 -62445 + DNAREP1_DM LINE Penelope 539 592 -2 2 745 185 0 40 0 chr2R 21084306 21084331 -62377 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2 745 23 54 0 0 chr2R 21084397 21084434 -62274 + AT_rich Low_complexity Low_complexity 1 37 0 2 745 32 43 0 0 chr2R 21085327 21085373 -61335 + AT_rich Low_complexity Low_complexity 1 46 0 2 745 26 74 0 0 chr2R 21085453 21085507 -61201 + AT_rich Low_complexity Low_complexity 1 54 0 2 745 25 0 0 0 chr2R 21085604 21085629 -61079 + AT_rich Low_complexity Low_complexity 1 25 0 2 745 37 0 0 0 chr2R 21088465 21088502 -58206 + AT_rich Low_complexity Low_complexity 1 37 0 2 745 1004 97 415 8 chr2R 21091815 21092056 -54652 - DNAREP1_DM LINE Penelope -8 586 248 2 745 26 30 0 0 chr2R 21093329 21093362 -53346 + AT_rich Low_complexity Low_complexity 1 33 0 2 745 21 36 0 0 chr2R 21094030 21094058 -52650 + AT_rich Low_complexity Low_complexity 1 28 0 2 745 27 0 0 0 chr2R 21094690 21094717 -51991 + AT_rich Low_complexity Low_complexity 1 27 0 2 745 2026 140 11 11 chr2R 21098478 21098831 -47877 + DNAREP1_DM LINE Penelope 1 353 -241 2 745 487 34 0 0 chr2R 21098843 21098902 -47806 + DNAREP1_DM LINE Penelope 536 594 0 2 745 21 0 0 0 chr2R 21099779 21099800 -46908 + AT_rich Low_complexity Low_complexity 1 21 0 2 745 25 83 0 0 chr2R 21101048 21101108 -45600 + AT_rich Low_complexity Low_complexity 1 60 0 2 745 37 52 0 0 chr2R 21101503 21101561 -45147 + AT_rich Low_complexity Low_complexity 1 58 0 2 745 43 20 0 0 chr2R 21101630 21101680 -45028 + AT_rich Low_complexity Low_complexity 1 50 0 2 746 669 226 149 53 chr2R 21103686 21104019 -42689 - DNAREP1_DM LINE Penelope -112 482 8 2 746 1373 84 138 14 chr2R 21105100 21105501 -41207 - DNAREP1_DM LINE Penelope 0 594 4 2 746 30 0 0 0 chr2R 21106073 21106103 -40605 + AT_rich Low_complexity Low_complexity 1 30 0 2 746 214 167 42 0 chr2R 21116765 21116813 -29895 + (TTTAA)n Simple_repeat Simple_repeat 4 53 0 2 746 25 31 0 0 chr2R 21116909 21116941 -29767 + AT_rich Low_complexity Low_complexity 1 32 0 2 746 21 0 0 0 chr2R 21117838 21117859 -28849 + AT_rich Low_complexity Low_complexity 1 21 0 2 746 246 105 0 0 chr2R 21118251 21118289 -28419 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 746 394 163 29 98 chr2R 21119667 21119769 -26939 - DNAREP1_DM LINE Penelope 0 594 500 2 746 45 62 0 0 chr2R 21124087 21124167 -22541 + AT_rich Low_complexity Low_complexity 1 80 0 2 746 422 56 208 0 chr2R 21125341 21125413 -21295 + IVK_DM LINE I 5312 5398 -4 2 746 286 79 0 0 chr2R 21125464 21125502 -21206 - DNAREP1_DM LINE Penelope 0 594 557 2 746 1633 115 86 43 chr2R 21125521 21125850 -20858 - DNAREP1_DM LINE Penelope -111 483 148 2 746 22 0 0 0 chr2R 21126181 21126203 -20505 + AT_rich Low_complexity Low_complexity 1 22 0 2 746 23 0 0 0 chr2R 21126625 21126648 -20060 + AT_rich Low_complexity Low_complexity 1 23 0 2 746 22 35 0 0 chr2R 21126758 21126787 -19921 + AT_rich Low_complexity Low_complexity 1 29 0 2 746 22 0 0 0 chr2R 21126859 21126881 -19827 + AT_rich Low_complexity Low_complexity 1 22 0 2 746 263 98 333 32 chr2R 21127786 21127849 -18859 + DNAREP1_DM LINE Penelope 305 386 -208 2 746 259 182 0 0 chr2R 21128544 21128588 -18120 + DNAREP1_DM LINE Penelope 11 54 -540 2 746 32 0 0 0 chr2R 21128908 21128940 -17768 + AT_rich Low_complexity Low_complexity 1 32 0 2 746 26 50 0 0 chr2R 21133264 21133304 -13404 + AT_rich Low_complexity Low_complexity 1 40 0 2 746 21 0 0 0 chr2R 21133599 21133620 -13088 + AT_rich Low_complexity Low_complexity 1 21 0 2 746 22 0 0 0 chr2R 21137937 21137959 -8749 + AT_rich Low_complexity Low_complexity 1 22 0 2 746 31 58 0 0 chr2R 21138227 21138279 -8429 + AT_rich Low_complexity Low_complexity 1 52 0 2 746 713 169 217 33 chr2R 21138287 21138581 -8127 + DNAREP1_DM LINE Penelope 22 369 -225 2 746 226 32 0 88 chr2R 21138579 21138613 -8095 + DNAREP1_DM LINE Penelope 564 594 0 2 746 306 54 0 0 chr2R 21139023 21139060 -7648 + DNAREP1_DM LINE Penelope 558 594 0 2 746 473 132 41 62 chr2R 21139830 21139927 -6781 - DNAREP1_DM LINE Penelope -93 501 407 2 746 817 69 43 0 chr2R 21139930 21140046 -6662 + DNAREP1_DM LINE Penelope 474 594 0 2 746 766 220 70 0 chr2R 21140044 21140244 -6464 + DNAREP1_DM LINE Penelope 2 215 -379 2 746 311 167 370 0 chr2R 21140256 21140364 -6344 + DNAREP1_DM LINE Penelope 141 288 -306 2 746 235 152 121 0 chr2R 21140369 21140435 -6273 + DNAREP1_DM LINE Penelope 217 290 -304 2 746 260 95 48 0 chr2R 21140440 21140482 -6226 + PROTOP_B DNA P 506 549 -604 2 746 458 267 124 11 chr2R 21140473 21140651 -6057 + DNAREP1_DM LINE Penelope 360 557 -37 2 746 972 169 33 14 chr2R 21142109 21142319 -4389 + DNAREP1_DM LINE Penelope 24 237 -357 2 746 358 174 35 0 chr2R 21142423 21142509 -4199 + HETRP_DM Satellite Satellite 13 101 -1771 2 746 249 170 0 54 chr2R 21142579 21142635 -4073 + HETRP_DM Satellite Satellite 831 883 -989 2 746 541 150 33 8 chr2R 21142940 21143061 -3647 + HETRP_DM Satellite Satellite 949 1072 -800 2 746 189 121 0 0 chr2R 21143061 21143094 -3614 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 746 1320 82 122 0 chr2R 21143524 21143720 -2988 - DNAREP1_DM LINE Penelope -34 560 341 2 746 493 174 54 20 chr2R 21143732 21143879 -2829 + DNAREP1_DM LINE Penelope 88 239 -355 2 746 409 171 11 0 chr2R 21143996 21144084 -2624 + HETRP_DM Satellite Satellite 13 101 -1771 2 746 253 146 0 59 chr2R 21144155 21144206 -2502 + HETRP_DM Satellite Satellite 831 878 -994 2 746 460 189 34 20 chr2R 21144520 21144666 -2042 + HETRP_DM Satellite Satellite 949 1096 -776 2 746 4286 58 23 26 chr2R 21145421 21146035 -673 - HETRP_DM Satellite Satellite -784 1088 477 2 746 203 0 0 36 chr2R 21146035 21146063 -645 + (AATAG)n Simple_repeat Simple_repeat 1 27 0 2 746 2865 24 8 26 chr2R 21146063 21146451 -257 - HETRP_DM Satellite Satellite -1362 510 130 2 746 800 65 116 0 chr2R 21146570 21146708 0 - HETRP_DM Satellite Satellite -927 945 792 2 585 1453 112 5 0 chr3LHet 2 217 -2555274 + Gypsy3_I LTR Gypsy 3026 3241 -2936 4 585 1582 118 103 0 chr3LHet 216 487 -2555004 + Gypsy3_I LTR Gypsy 4134 4432 -1745 4 585 256 146 0 94 chr3LHet 474 527 -2554964 + Gypsy_DS LTR Gypsy 5346 5393 -2129 4 585 623 98 0 11 chr3LHet 495 588 -2554903 + Gypsy3_I LTR Gypsy 4537 4628 -1549 4 585 1794 184 0 0 chr3LHet 576 897 -2554594 + Gypsy3_I LTR Gypsy 4936 5256 -921 4 585 26 82 0 0 chr3LHet 1769 1830 -2553661 + AT_rich Low_complexity Low_complexity 1 61 0 4 585 3860 27 2 4 chr3LHet 2317 2798 -2552693 - PROTOP DNA P -3946 534 55 4 585 6569 88 5 0 chr3LHet 2798 3723 -2551768 + Gypsy3_I LTR Gypsy 2312 3241 -2936 4 585 1598 114 103 0 chr3LHet 3722 3993 -2551498 + Gypsy3_I LTR Gypsy 4134 4432 -1745 4 585 256 146 0 94 chr3LHet 3980 4033 -2551458 + Gypsy_DS LTR Gypsy 5346 5393 -2129 4 585 623 98 0 11 chr3LHet 4001 4094 -2551397 + Gypsy3_I LTR Gypsy 4537 4628 -1549 4 585 2766 215 100 4 chr3LHet 4082 5196 -2550295 + Gypsy3_I LTR Gypsy 4936 6156 -21 4 585 702 186 23 125 chr3LHet 5199 5463 -2550028 + Gypsy3_LTR LTR Gypsy 1 237 -161 4 585 45 34 0 0 chr3LHet 5521 5580 -2549911 + AT_rich Low_complexity Low_complexity 1 59 0 4 585 347 177 20 145 chr3LHet 5580 5732 -2549759 + Gypsy3_I LTR Gypsy 183 315 -5862 4 585 8278 130 15 22 chr3LHet 5880 7305 -2548186 + Gypsy3_I LTR Gypsy 925 2295 -3882 4 585 1727 178 0 0 chr3LHet 7323 7627 -2547864 + Gypsy3_I LTR Gypsy 5028 5331 -846 4 585 707 211 0 0 chr3LHet 7630 7777 -2547714 + Gypsy3_I LTR Gypsy 6010 6156 -21 4 585 743 178 23 125 chr3LHet 7780 8044 -2547447 + Gypsy3_LTR LTR Gypsy 1 237 -161 4 585 42 36 0 0 chr3LHet 8102 8158 -2547333 + AT_rich Low_complexity Low_complexity 1 56 0 4 585 395 173 19 142 chr3LHet 8158 8313 -2547178 + Gypsy3_I LTR Gypsy 180 315 -5862 4 585 4702 147 25 12 chr3LHet 8461 9267 -2546224 + Gypsy3_I LTR Gypsy 925 1740 -4437 4 585 6509 146 21 0 chr3LHet 9267 10653 -2544838 + Gypsy3_I LTR Gypsy 2294 3733 -3279 4 585 1171 101 0 0 chr3LHet 10652 10820 -2544671 + Gypsy3_I LTR Gypsy 4134 4301 -1876 4 585 1651 254 59 3 chr3LHet 10847 11730 -2543761 + Gypsy3_I LTR Gypsy 5347 6993 -19 4 585 842 198 119 89 chr3LHet 11733 12104 -2543387 + Gypsy3_LTR LTR Gypsy 1 382 -16 4 585 273 211 13 0 chr3LHet 13895 13971 -2541520 + Gypsy8_I LTR Gypsy 1 77 -4270 4 585 1339 85 154 3 chr3LHet 14701 14993 -2540498 + DNAREP1_DM LINE Penelope 221 594 0 4 585 312 358 48 17 chr3LHet 15009 15299 -2540192 + ROO_I LTR Pao 7433 7731 -525 4 585 304 272 9 9 chr3LHet 15380 15495 -2539996 - ROO_I LTR Pao -2488 5768 5654 4 585 1010 118 50 0 chr3LHet 16023 16184 -2539307 - MAX_I LTR Pao -1742 6172 6004 4 585 310 191 29 0 chr3LHet 16182 16250 -2539241 - MAX_I LTR Pao -2372 5542 5473 4 585 227 125 0 0 chr3LHet 16285 16325 -2539166 - BARI1 DNA Tc1 -1708 42 3 4 585 2639 130 4 152 chr3LHet 16293 16990 -2538501 + IDEFIX_LTR LTR Gypsy 1 594 0 4 585 3066 173 7 0 chr3LHet 17394 17978 -2537513 + IDEFIX_I LTR Gypsy 1 588 -5040 4 585 4648 139 5 0 chr3LHet 17985 18757 -2536734 + IDEFIX_I LTR Gypsy 889 1664 -3964 4 585 3004 144 29 0 chr3LHet 18762 19277 -2536214 + IDEFIX_I LTR Gypsy 1963 2492 -3136 4 585 6564 138 28 13 chr3LHet 19296 21418 -2534073 + IDEFIX_I LTR Gypsy 2615 4828 -800 4 585 1907 137 106 9 chr3LHet 21452 22036 -2533455 + IDEFIX_I LTR Gypsy 4988 5628 0 4 585 413 37 0 0 chr3LHet 22036 22090 -2533401 + IDEFIX_LTR LTR Gypsy 1 54 -540 4 585 15655 11 6 1 chr3LHet 22143 24011 -2531480 + FW_DM LINE Jockey 2 1879 -2813 4 585 1689 134 79 32 chr3LHet 24432 24919 -2530572 - QUASIMODO_LTR LTR Gypsy -15 643 1 4 585 2591 45 42 111 chr3LHet 24919 25394 -2530097 - PROTOP_A DNA P -401 704 263 4 585 1362 230 66 29 chr3LHet 25387 25839 -2529652 + TAHRE LINE telomeric 9540 10008 -455 4 585 596 230 119 86 chr3LHet 25855 26216 -2529275 - Gypsy3_LTR LTR Gypsy -25 373 1 4 585 13412 42 5 29 chr3LHet 26469 28303 -2527188 + BATUMI_I LTR Pao 2357 4146 -3817 4 585 16317 116 29 13 chr3LHet 28317 31319 -2524172 + BATUMI_I LTR Pao 4362 7672 -242 4 585 869 92 115 19 chr3LHet 31305 31461 -2524030 + BATUMI_I LTR Pao 7793 7963 0 4 585 1677 50 8 29 chr3LHet 31483 31729 -2523762 + BATUMI_LTR LTR Pao 32 272 0 4 585 506 311 28 16 chr3LHet 31729 31984 -2523507 + Copia_I LTR Copia 408 665 -3928 4 585 4558 68 50 7 chr3LHet 32053 32738 -2522753 + TART LINE telomeric 231 944 -13533 4 585 1734 82 63 8 chr3LHet 32736 33223 -2522268 - TC1_DM DNA Tc1 -1103 563 1 4 585 31 0 0 0 chr3LHet 33577 33608 -2521883 + AT_rich Low_complexity Low_complexity 1 31 0 4 585 751 119 154 12 chr3LHet 33611 33773 -2521718 + TART LINE telomeric 10478 10662 -3815 4 585 3392 62 10 8 chr3LHet 34849 35336 -2520155 + M4DM DNA Transib 1 488 -947 4 585 3487 71 46 23 chr3LHet 35354 35915 -2519576 + M4DM DNA Transib 862 1435 0 4 585 3692 46 51 40 chr3LHet 35927 36520 -2518971 - PROTOP_B DNA P 0 1153 555 4 585 2270 126 150 36 chr3LHet 36751 37277 -2518214 - DNAREP1_DM LINE Penelope 0 594 9 4 585 981 56 345 0 chr3LHet 37369 37566 -2517925 + G4_DM LINE Jockey 1 265 -3591 4 585 3835 81 165 22 chr3LHet 37567 38304 -2517187 + G4_DM LINE Jockey 525 1367 -2489 4 585 34 42 0 0 chr3LHet 38323 38371 -2517120 + AT_rich Low_complexity Low_complexity 1 48 0 4 585 43 94 0 0 chr3LHet 38884 39011 -2516480 + AT_rich Low_complexity Low_complexity 1 127 0 4 585 1177 43 0 0 chr3LHet 40789 40950 -2514541 - IDEFIX_I LTR Gypsy -4655 973 813 4 585 257 29 0 0 chr3LHet 42631 42665 -2512826 + DNAREP1_DM LINE Penelope 526 559 -35 4 585 1703 162 61 61 chr3LHet 42668 43109 -2512382 + DNAREP1_DM LINE Penelope 133 573 -21 4 585 408 134 43 35 chr3LHet 43109 43225 -2512266 + DNAREP1_DM LINE Penelope 184 300 -294 4 585 594 145 241 11 chr3LHet 43207 43381 -2512110 + DNAREP1_DM LINE Penelope 175 388 -206 4 585 403 269 132 13 chr3LHet 43683 44015 -2511476 + IDEFIX_I LTR Gypsy 1518 1770 -3858 4 585 471 306 35 19 chr3LHet 44055 44315 -2511176 + QUASIMODO_I LTR Gypsy 669 942 -5118 4 585 312 259 45 15 chr3LHet 44320 44453 -2511038 + QUASIMODO_I LTR Gypsy 1593 1729 -4331 4 585 2444 251 25 2 chr3LHet 44926 45717 -2509774 + QUASIMODO_I LTR Gypsy 1935 2743 -3317 4 585 1143 270 14 11 chr3LHet 45719 46090 -2509401 + TV1I LTR Gypsy 2742 3113 -2850 4 585 455 291 15 0 chr3LHet 46096 46295 -2509196 + QUASIMODO_I LTR Gypsy 3355 3556 -2504 4 585 908 122 52 6 chr3LHet 46294 46461 -2509030 + G3_DM LINE Jockey 4088 4262 -343 4 585 1977 29 254 0 chr3LHet 46461 46768 -2508723 - DIVER2_LTR LTR Pao 0 385 1 4 585 2764 29 0 9 chr3LHet 46768 47115 -2508376 - DIVER2_I LTR Pao 0 4147 3804 4 585 408 134 43 35 chr3LHet 47140 47256 -2508235 + DNAREP1_DM LINE Penelope 184 300 -294 4 585 594 145 241 11 chr3LHet 47238 47412 -2508079 + DNAREP1_DM LINE Penelope 175 388 -206 4 585 403 269 132 13 chr3LHet 47714 48046 -2507445 + IDEFIX_I LTR Gypsy 1518 1770 -3858 4 585 471 306 35 19 chr3LHet 48086 48346 -2507145 + QUASIMODO_I LTR Gypsy 669 942 -5118 4 585 312 259 45 15 chr3LHet 48351 48484 -2507007 + QUASIMODO_I LTR Gypsy 1593 1729 -4331 4 585 2444 251 25 2 chr3LHet 48957 49748 -2505743 + QUASIMODO_I LTR Gypsy 1935 2743 -3317 4 585 1143 270 14 11 chr3LHet 49750 50121 -2505370 + TV1I LTR Gypsy 2742 3113 -2850 4 585 455 291 15 0 chr3LHet 50127 50326 -2505165 + QUASIMODO_I LTR Gypsy 3355 3556 -2504 4 585 929 116 52 6 chr3LHet 50325 50492 -2504999 + G3_DM LINE Jockey 4088 4262 -343 4 585 1977 29 254 0 chr3LHet 50492 50799 -2504692 - DIVER2_LTR LTR Pao 0 385 1 4 585 13752 32 3 8 chr3LHet 50799 52518 -2502973 - DIVER2_I LTR Pao 0 4147 2437 4 585 2562 46 29 3 chr3LHet 53367 53715 -2501776 - DIVER2_I LTR Pao -1705 2442 2086 4 585 854 45 0 0 chr3LHet 53727 53838 -2501653 - DIVER2_I LTR Pao -4036 111 1 4 585 2612 28 91 25 chr3LHet 53838 54199 -2501292 - DIVER2_LTR LTR Pao 0 385 1 4 585 1709 49 4 54 chr3LHet 54199 54453 -2501038 + G3_DM LINE Jockey 4283 4523 -82 4 585 1821 151 77 30 chr3LHet 54453 54857 -2500634 + Invader1_LTR LTR Gypsy 1 423 0 4 585 1024 58 200 0 chr3LHet 54879 55034 -2500457 + PROTOP_B DNA P 1 186 -967 4 585 1548 194 75 27 chr3LHet 55050 55452 -2500039 + Gypsy_LTR LTR Gypsy 25 445 -37 4 585 381 154 321 7 chr3LHet 55460 55597 -2499894 + Gypsy_I LTR Gypsy 1 180 -6327 4 585 10161 56 8 0 chr3LHet 55599 56928 -2498563 + BS2 LINE Jockey 3382 4721 0 4 585 753 117 1 12 chr3LHet 56944 57084 -2498407 + BS2 LINE Jockey 4605 4721 0 4 585 256 123 70 0 chr3LHet 57104 57161 -2498330 + Gypsy_I LTR Gypsy 252 312 -6195 4 585 7856 2 0 9 chr3LHet 57170 58088 -2497403 - LINEJ1_DM LINE Jockey 0 5020 4111 4 585 31587 112 42 5 chr3LHet 58108 63086 -2492405 + Gypsy_I LTR Gypsy 236 5397 -1110 4 585 1378 168 7 27 chr3LHet 63086 63386 -2492105 + Gypsy_LTR LTR Gypsy 91 384 -98 4 585 25567 104 29 3 chr3LHet 63389 67207 -2488284 + Gypsy_I LTR Gypsy 1046 4964 -1543 4 585 3515 2 0 0 chr3LHet 67207 67606 -2487885 - BLOOD_LTR LTR Gypsy 0 399 1 4 585 56594 0 0 0 chr3LHet 67606 74220 -2481271 - BLOOD_I LTR Gypsy 0 6613 1 4 585 3515 2 0 0 chr3LHet 74220 74619 -2480872 - BLOOD_LTR LTR Gypsy 0 399 1 4 585 2464 167 2 0 chr3LHet 74619 75055 -2480436 + Gypsy_I LTR Gypsy 4961 5397 -1110 4 585 1518 190 6 30 chr3LHet 75055 75419 -2480072 + Gypsy_LTR LTR Gypsy 91 445 -37 4 585 465 18 0 0 chr3LHet 75429 75485 -2480006 + PROTOP_A DNA P 183 238 -867 4 585 5031 55 111 0 chr3LHet 75483 76261 -2479230 + PROTOP_B DNA P 290 1153 0 4 585 2181 95 126 2 chr3LHet 76262 76733 -2478758 + Invader1_I LTR Gypsy 17 545 -2641 4 585 617 92 0 0 chr3LHet 76739 76826 -2478665 + Invader1_I LTR Gypsy 662 748 -2438 4 585 771 126 181 5 chr3LHet 76825 77024 -2478467 + Invader1_LTR LTR Gypsy 111 344 -79 4 585 448 244 6 6 chr3LHet 77073 77237 -2478254 + TV1I LTR Gypsy 3502 3665 -2298 4 585 2267 25 42 0 chr3LHet 77237 77523 -2477968 + Invader3_LTR LTR Gypsy 1 298 0 4 585 482 236 55 83 chr3LHet 77630 77847 -2477644 + TV1I LTR Gypsy 3814 4024 -1939 4 585 21 0 0 0 chr3LHet 77856 77877 -2477614 + AT_rich Low_complexity Low_complexity 1 21 0 4 585 12446 49 26 0 chr3LHet 78294 79954 -2475537 + IDEFIX_I LTR Gypsy 895 2598 -3030 4 585 579 99 0 0 chr3LHet 79953 80044 -2475447 + IDEFIX_I LTR Gypsy 2704 2794 -2834 4 585 2635 94 84 7 chr3LHet 80063 80513 -2474978 + IDEFIX_I LTR Gypsy 3317 3801 -1827 4 585 11306 4 0 1 chr3LHet 80502 81824 -2473667 + DOC LINE Jockey 3406 4725 0 4 585 2529 97 96 20 chr3LHet 81830 82445 -2473046 + IDEFIX_I LTR Gypsy 3777 4449 -1179 4 585 210 37 0 0 chr3LHet 82445 82472 -2473019 + (TAA)n Simple_repeat Simple_repeat 1 27 0 4 585 1778 73 113 53 chr3LHet 82472 82577 -2472914 + IDEFIX_I LTR Gypsy 4450 4550 -1078 4 585 4143 56 98 7 chr3LHet 82581 83273 -2472218 + IDEFIX_I LTR Gypsy 4794 5548 -80 4 585 7772 69 52 0 chr3LHet 83312 84420 -2471071 - DMRT1B LINE R1 -1789 3394 2229 4 585 3848 93 39 0 chr3LHet 84417 85005 -2470486 - DMRT1B LINE R1 -3103 2080 1470 4 585 422 79 0 0 chr3LHet 85032 85095 -2470396 - DMRT1B LINE R1 -4090 1093 1031 4 585 271 56 0 0 chr3LHet 85095 85131 -2470360 - DNAREP1_DM LINE Penelope -551 43 8 4 585 519 169 15 7 chr3LHet 85202 85339 -2470152 + PROTOP_A DNA P 311 448 -657 4 585 507 141 287 0 chr3LHet 85378 85549 -2469942 - DNAREP1_DM LINE Penelope -199 395 176 4 585 26 0 0 0 chr3LHet 85651 85677 -2469814 + AT_rich Low_complexity Low_complexity 1 26 0 4 585 4527 2 0 0 chr3LHet 85725 86257 -2469234 + NOMAD_LTR LTR Gypsy 1 518 0 4 585 22844 0 1 9 chr3LHet 86257 88912 -2466579 + NOMAD_I LTR Gypsy 1 2634 -3938 4 585 2850 38 83 5 chr3LHet 89013 89412 -2466079 + IDEFIX_LTR LTR Gypsy 165 594 0 4 585 21 0 0 0 chr3LHet 89569 89590 -2465901 + AT_rich Low_complexity Low_complexity 1 21 0 4 585 1845 96 8 8 chr3LHet 89842 90137 -2465354 + IDEFIX_I LTR Gypsy 1 245 -5383 4 585 23 33 0 0 chr3LHet 90615 90645 -2464846 + AT_rich Low_complexity Low_complexity 1 30 0 4 585 773 97 67 0 chr3LHet 90847 90981 -2464510 - DNAREP1_DM LINE Penelope -444 150 8 4 585 487 184 15 7 chr3LHet 91052 91189 -2464302 + PROTOP_B DNA P 311 448 -705 4 585 268 111 22 0 chr3LHet 91228 91273 -2464218 - DNAREP1_DM LINE Penelope -199 395 350 4 585 423 156 62 0 chr3LHet 91302 91398 -2464093 - DNAREP1_DM LINE Penelope -317 277 176 4 585 27 0 0 0 chr3LHet 91500 91527 -2463964 + AT_rich Low_complexity Low_complexity 1 27 0 4 585 3734 55 78 5 chr3LHet 91597 92151 -2463340 + IDEFIX_LTR LTR Gypsy 1 594 0 4 585 1654 25 0 5 chr3LHet 92233 92436 -2463055 + Invader3_I LTR Gypsy 3993 4194 -694 4 585 1004 61 85 6 chr3LHet 99532 99696 -2455795 - CIRCE LINE Composite -1199 5157 4981 4 585 355 80 0 0 chr3LHet 99975 100025 -2455466 - CIRCE LINE Composite -1376 4980 4931 4 585 822 332 53 34 chr3LHet 100286 101328 -2454163 + BLASTOPIA_I LTR Gypsy 2501 3562 -919 4 585 230 250 0 0 chr3LHet 101856 101924 -2453567 + BLASTOPIA_I LTR Gypsy 4225 4292 -189 4 585 337 0 0 23 chr3LHet 102425 102468 -2453023 - NOMAD_LTR LTR Gypsy 0 518 477 4 585 2592 8 3 0 chr3LHet 108676 109005 -2446486 - NOMAD_LTR LTR Gypsy -206 312 1 4 585 29 0 0 0 chr3LHet 109018 109047 -2446444 + AT_rich Low_complexity Low_complexity 1 29 0 4 585 407 316 55 55 chr3LHet 111865 112284 -2443207 + BLASTOPIA_I LTR Gypsy 2178 2596 -1885 4 585 360 286 32 19 chr3LHet 112507 112664 -2442827 + MDG3_I LTR Gypsy 3266 3424 -1562 4 585 275 311 24 24 chr3LHet 112878 113043 -2442448 + BLASTOPIA_I LTR Gypsy 3541 3705 -776 4 585 2905 63 19 3 chr3LHet 113209 113588 -2441903 - DIVER2_LTR LTR Pao 0 385 1 4 585 282 29 0 0 chr3LHet 113588 113622 -2441869 - DIVER2_I LTR Pao 0 4147 4114 4 585 2543 10 0 6 chr3LHet 113722 114039 -2441452 + DOC LINE Jockey 4411 4725 0 4 585 4309 94 98 25 chr3LHet 114045 114660 -2440831 + IDEFIX_I LTR Gypsy 3777 4449 -1179 4 585 210 37 0 0 chr3LHet 114660 114687 -2440804 + (TAA)n Simple_repeat Simple_repeat 1 27 0 4 585 4309 94 98 25 chr3LHet 114687 114792 -2440699 + IDEFIX_I LTR Gypsy 4450 4550 -1078 4 585 4590 55 98 7 chr3LHet 114796 115488 -2440003 + IDEFIX_I LTR Gypsy 4794 5548 -80 4 585 4441 65 92 0 chr3LHet 115527 116143 -2439348 - DMRT1B LINE R1 -1789 3394 2722 4 585 435 0 0 0 chr3LHet 125087 125137 -2430354 + NOMAD_I LTR Gypsy 6523 6572 0 4 585 4739 0 0 0 chr3LHet 125137 125655 -2429836 + NOMAD_LTR LTR Gypsy 1 518 0 4 585 3961 45 78 5 chr3LHet 125667 126221 -2429270 + IDEFIX_LTR LTR Gypsy 1 594 0 4 585 25 0 0 0 chr3LHet 126411 126436 -2429055 + AT_rich Low_complexity Low_complexity 1 25 0 4 585 3128 55 0 0 chr3LHet 126702 127103 -2428388 + IDEFIX_I LTR Gypsy 21 421 -5207 4 586 9144 106 8 1 chr3LHet 135549 136841 -2418650 - HMSBEAGLE_I LTR Gypsy -1399 5130 3830 4 586 5878 117 26 0 chr3LHet 136831 137680 -2417811 - HMSBEAGLE_I LTR Gypsy -4151 2378 1508 4 586 839 189 0 0 chr3LHet 137682 137825 -2417666 - HMSBEAGLE_I LTR Gypsy -5175 1354 1212 4 586 386 53 18 0 chr3LHet 137937 137994 -2417497 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 586 3107 61 153 7 chr3LHet 138496 138961 -2416530 - Mariner2_DM DNA Tc1 -365 547 15 4 586 225 189 0 0 chr3LHet 139320 139357 -2416134 - TV1I LTR Gypsy -5354 609 573 4 586 261 271 0 56 chr3LHet 139415 139540 -2415951 - OSVALDO_I LTR Gypsy -6102 551 434 4 586 229 114 0 0 chr3LHet 148990 149025 -2406466 - BARI1 DNA Tc1 -1712 38 4 4 586 4075 40 70 7 chr3LHet 148994 149553 -2405938 + IDEFIX_LTR LTR Gypsy 1 594 0 4 586 21 0 0 0 chr3LHet 149743 149764 -2405727 + AT_rich Low_complexity Low_complexity 1 21 0 4 586 7206 63 21 1 chr3LHet 150017 151003 -2404488 + IDEFIX_I LTR Gypsy 13 1065 -4898 4 586 4697 4 0 0 chr3LHet 151472 151990 -2403501 - NOMAD_LTR LTR Gypsy 0 518 1 4 586 273 320 14 21 chr3LHet 152760 152901 -2402590 + Copia2_I LTR Copia 521 696 -3466 4 586 18255 2 0 0 chr3LHet 152951 154993 -2400498 - G6_DM LINE Jockey 0 2042 1 4 586 2993 313 59 32 chr3LHet 155104 157010 -2398481 + Copia2_I LTR Copia 833 2789 -1373 4 586 558 286 22 0 chr3LHet 156999 157184 -2398307 + Copia2_I LTR Copia 3877 4065 -97 4 586 2962 203 32 15 chr3LHet 157474 159666 -2395825 - SAR_DM Satellite Satellite -1116 2229 1 4 586 3730 212 25 18 chr3LHet 159700 164111 -2391380 - SAR_DM Satellite Satellite -378 4441 1 4 586 2280 180 25 3 chr3LHet 164138 164770 -2390721 - SAR_DM Satellite Satellite -634 646 1 4 586 1473 204 16 4 chr3LHet 164793 165283 -2390208 - SAR_DM Satellite Satellite -630 496 1 4 586 3251 207 48 28 chr3LHet 165306 168568 -2386923 - SAR_DM Satellite Satellite -378 3326 1 4 586 1860 183 40 2 chr3LHet 168593 169148 -2386343 - SAR_DM Satellite Satellite -994 576 1 4 586 1035 141 21 39 chr3LHet 169160 169578 -2385913 - DNAREP1_DM LINE Penelope -262 332 90 4 586 6125 50 126 1 chr3LHet 169591 171013 -2384478 + Baggins1 LINE LOA 243 1843 -3610 4 586 3635 39 14 0 chr3LHet 171027 171462 -2384029 + Baggins1 LINE LOA 2128 2568 -2885 4 586 4882 54 74 0 chr3LHet 171459 172541 -2382950 + DMCR1A LINE CR1 328 1489 -2981 4 586 1289 39 0 0 chr3LHet 172540 172694 -2382797 + DMCR1A LINE CR1 1760 1913 -2557 4 586 43102 2 0 0 chr3LHet 172694 177414 -2378077 + BS2 LINE Jockey 1 4721 0 4 586 1204 66 0 0 chr3LHet 177431 177582 -2377909 + DMCR1A LINE CR1 1905 2055 -2415 4 586 13013 27 40 2 chr3LHet 177586 179597 -2375894 + DMCR1A LINE CR1 2384 4470 0 4 586 8697 50 84 0 chr3LHet 179598 180887 -2374604 + Baggins1 LINE LOA 2575 3972 -1481 4 586 7403 46 13 1 chr3LHet 180885 181794 -2373697 + Baggins1 LINE LOA 4534 5453 0 4 586 845 212 35 25 chr3LHet 181796 182166 -2373325 - DNAREP1_DM LINE Penelope -262 332 60 4 586 873 160 87 24 chr3LHet 182150 182611 -2372880 - DNAREP1_DM LINE Penelope -267 327 86 4 586 1042 147 66 31 chr3LHet 182614 183129 -2372362 - DNAREP1_DM LINE Penelope -262 332 87 4 586 1020 161 34 62 chr3LHet 183200 183862 -2371629 - DNAREP1_DM LINE Penelope -262 332 79 4 586 904 131 17 22 chr3LHet 183837 184017 -2371474 - DNAREP1_DM LINE Penelope -275 319 141 4 586 33 0 0 0 chr3LHet 184334 184367 -2371124 + AT_rich Low_complexity Low_complexity 1 33 0 4 586 769 357 38 16 chr3LHet 185198 185751 -2369740 + HMSBEAGLE_I LTR Gypsy 1509 2073 -4456 4 586 286 245 73 28 chr3LHet 186263 186372 -2369119 + HMSBEAGLE_I LTR Gypsy 2650 2763 -3766 4 586 1877 318 39 21 chr3LHet 186652 187649 -2367842 + HMSBEAGLE_I LTR Gypsy 2272 3994 -2535 4 586 628 351 52 44 chr3LHet 187651 189139 -2366352 + HMSBEAGLE_I LTR Gypsy 4245 5743 -786 4 586 24 0 0 0 chr3LHet 189404 189428 -2366063 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 385 181 122 19 chr3LHet 190877 190984 -2364507 - DNAREP1_DM LINE Penelope -356 238 121 4 586 572 130 0 0 chr3LHet 190968 191060 -2364431 - DNAREP1_DM LINE Penelope -361 233 142 4 586 1013 169 51 35 chr3LHet 191070 191574 -2363917 - DNAREP1_DM LINE Penelope -262 332 86 4 586 930 123 23 10 chr3LHet 191549 191746 -2363745 - DNAREP1_DM LINE Penelope -262 332 141 4 586 2911 56 81 0 chr3LHet 191773 192167 -2363324 + Baggins1 LINE LOA 1 426 -5027 4 586 7932 44 77 0 chr3LHet 192165 193162 -2362329 + Baggins1 LINE LOA 1404 2477 -2976 4 586 434 66 16 0 chr3LHet 193296 193357 -2362134 + Jockey2 LINE Jockey 249 310 -3118 4 586 455 333 40 28 chr3LHet 193661 193911 -2361580 + LINEJ1_DM LINE Jockey 954 1206 -3814 4 586 873 87 495 0 chr3LHet 193910 194160 -2361331 + Jockey2 LINE Jockey 386 759 -2669 4 586 2034 86 93 27 chr3LHet 194159 194459 -2361032 + Jockey2 LINE Jockey 864 1183 -2245 4 586 474 62 0 0 chr3LHet 194473 194538 -2360953 + Jockey2 LINE Jockey 3206 3270 -158 4 586 13648 42 18 2 chr3LHet 194551 196230 -2359261 + DMCR1A LINE CR1 2 1707 -2763 4 586 12884 27 42 2 chr3LHet 196229 198237 -2357254 + DMCR1A LINE CR1 2382 4470 0 4 586 8649 52 84 0 chr3LHet 198238 199527 -2355964 + Baggins1 LINE LOA 2575 3972 -1481 4 586 7460 44 16 0 chr3LHet 199525 200431 -2355060 + Baggins1 LINE LOA 4534 5453 0 4 586 755 207 55 26 chr3LHet 200433 200796 -2354695 - DNAREP1_DM LINE Penelope -262 332 60 4 586 850 164 87 24 chr3LHet 200780 201241 -2354250 - DNAREP1_DM LINE Penelope -267 327 86 4 586 1042 146 66 31 chr3LHet 201244 201759 -2353732 - DNAREP1_DM LINE Penelope -262 332 87 4 586 1084 157 55 18 chr3LHet 201830 202541 -2352950 - DNAREP1_DM LINE Penelope -262 332 86 4 586 938 164 27 8 chr3LHet 202521 202879 -2352612 - DNAREP1_DM LINE Penelope -262 332 91 4 586 522 121 103 8 chr3LHet 202880 202997 -2352494 - DNAREP1_DM LINE Penelope -261 333 206 4 586 251 322 48 52 chr3LHet 203320 203592 -2351899 - DM176_I LTR Gypsy -2229 3734 3464 4 586 317 263 0 0 chr3LHet 203882 203988 -2351503 - DM176_I LTR Gypsy -2714 3706 3621 4 586 1750 137 200 36 chr3LHet 203982 204409 -2351082 - DNAREP1_DM LINE Penelope -6 588 119 4 586 271 211 0 66 chr3LHet 204834 204895 -2350596 + DNAREP1_DM LINE Penelope 10 66 -528 4 586 227 200 157 0 chr3LHet 204896 204966 -2350525 + DNAREP1_DM LINE Penelope 514 594 0 4 586 1867 119 132 33 chr3LHet 205227 205737 -2349754 - DNAREP1_DM LINE Penelope -136 458 1 4 586 261 120 0 91 chr3LHet 205817 205872 -2349619 + DNAREP1_DM LINE Penelope 544 593 -1 4 586 1727 112 137 18 chr3LHet 206294 206622 -2348869 + DNAREP1_DM LINE Penelope 228 594 0 4 586 21 36 0 0 chr3LHet 206691 206719 -2348772 + AT_rich Low_complexity Low_complexity 1 28 0 4 586 21 0 0 0 chr3LHet 207705 207726 -2347765 + AT_rich Low_complexity Low_complexity 1 21 0 4 586 1466 125 112 4 chr3LHet 208619 209094 -2346397 - DNAREP1_DM LINE Penelope 0 594 1 4 586 555 269 20 20 chr3LHet 209849 209997 -2345494 + DNAREP1_DM LINE Penelope 294 441 -153 4 586 296 93 0 0 chr3LHet 209994 210037 -2345454 + DNAREP1_DM LINE Penelope 542 584 -10 4 586 698 109 0 0 chr3LHet 210376 210477 -2345014 + DNAREP1_DM LINE Penelope 1 101 -493 4 586 24 32 0 0 chr3LHet 210811 210842 -2344649 + AT_rich Low_complexity Low_complexity 1 31 0 4 586 278 200 15 0 chr3LHet 211003 211068 -2344423 - DNAREP1_DM LINE Penelope -11 583 518 4 586 24 0 0 0 chr3LHet 211450 211474 -2344017 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 24 67 0 0 chr3LHet 211985 212030 -2343461 + AT_rich Low_complexity Low_complexity 1 45 0 4 586 38 39 0 0 chr3LHet 212077 212129 -2343362 + AT_rich Low_complexity Low_complexity 1 52 0 4 586 342 137 0 0 chr3LHet 212517 212568 -2342923 - DNAREP1_DM LINE Penelope -2 592 542 4 586 235 228 0 17 chr3LHet 212695 212753 -2342738 + DNAREP1_DM LINE Penelope 285 341 -253 4 586 248 197 0 32 chr3LHet 212848 212911 -2342580 + DNAREP1_DM LINE Penelope 534 594 0 4 586 257 246 202 0 chr3LHet 213002 213116 -2342375 + DNAREP1_DM LINE Penelope 414 550 -44 4 586 24 32 0 0 chr3LHet 213423 213454 -2342037 + AT_rich Low_complexity Low_complexity 1 31 0 4 586 298 87 22 0 chr3LHet 215229 215275 -2340216 + DNAREP1_DM LINE Penelope 1 47 -547 4 586 247 125 25 89 chr3LHet 215325 215404 -2340087 + DNAREP1_DM LINE Penelope 218 291 -303 4 586 467 174 347 18 chr3LHet 215995 216165 -2339326 - DNAREP1_DM LINE Penelope -62 532 307 4 586 551 179 0 62 chr3LHet 216222 216335 -2339156 - DNAREP1_DM LINE Penelope -487 107 2 4 586 1968 157 124 34 chr3LHet 216333 216802 -2338689 - DNAREP1_DM LINE Penelope 0 594 84 4 586 1434 140 60 20 chr3LHet 216804 217103 -2338388 - DNAREP1_DM LINE Penelope -283 311 1 4 586 232 264 154 0 chr3LHet 217153 217244 -2338247 - DNAREP1_DM LINE Penelope -45 549 445 4 586 22 88 0 0 chr3LHet 217307 217364 -2338127 + AT_rich Low_complexity Low_complexity 1 57 0 4 586 23 0 0 0 chr3LHet 219116 219139 -2336352 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 511 195 8 0 chr3LHet 219714 219832 -2335659 + DNAREP1_DM LINE Penelope 88 206 -388 4 586 821 155 10 73 chr3LHet 219860 220228 -2335263 + DNAREP1_DM LINE Penelope 86 332 -262 4 586 44 20 0 0 chr3LHet 220306 220357 -2335134 + AT_rich Low_complexity Low_complexity 1 51 0 4 586 37 0 0 0 chr3LHet 220424 220461 -2335030 + AT_rich Low_complexity Low_complexity 1 37 0 4 586 266 100 0 0 chr3LHet 220508 220548 -2334943 - PROTOP_B DNA P -888 265 226 4 586 318 164 0 0 chr3LHet 220551 220606 -2334885 + DMRP1 Unknown Unknown 74 128 -218 4 586 23 0 0 0 chr3LHet 220827 220850 -2334641 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 12921 24 32 16 chr3LHet 220943 222585 -2332906 + TRANSIB1 DNA Transib 1 1667 -1347 4 586 1545 30 15 0 chr3LHet 222583 222786 -2332705 + TRANSIB1 DNA Transib 2809 3014 0 4 586 251 174 0 0 chr3LHet 223892 223938 -2331553 - DNAREP1_DM LINE Penelope 0 594 549 4 586 3196 150 25 10 chr3LHet 224922 225520 -2329971 - DMCR1A LINE CR1 -307 4163 3557 4 586 715 185 38 0 chr3LHet 225550 225707 -2329784 - DMCR1A LINE CR1 -1029 3441 3279 4 586 876 160 11 27 chr3LHet 225914 226100 -2329391 - DMCR1A LINE CR1 -1171 3299 3117 4 586 1086 138 0 0 chr3LHet 226101 226282 -2329209 - DMCR1A LINE CR1 -1833 2637 2457 4 586 707 138 46 0 chr3LHet 226279 226409 -2329082 - DMCR1A LINE CR1 -2210 2260 2125 4 586 2038 130 14 22 chr3LHet 226421 226791 -2328700 - DMCR1A LINE CR1 -2907 1563 1197 4 586 373 149 81 0 chr3LHet 226823 226897 -2328594 - DMCR1A LINE CR1 -3450 1020 941 4 586 691 204 225 26 chr3LHet 226943 227245 -2328246 - DMCR1A LINE CR1 -3684 786 425 4 586 1251 69 65 60 chr3LHet 227251 227466 -2328025 - DNAREP1_DM LINE Penelope -9 585 370 4 586 569 121 196 39 chr3LHet 227484 227649 -2327842 + DNAREP1_DM LINE Penelope 431 574 -20 4 586 232 111 0 62 chr3LHet 227646 227694 -2327797 + PROTOP_A DNA P 506 550 -555 4 586 26 0 0 0 chr3LHet 228415 228441 -2327050 + AT_rich Low_complexity Low_complexity 1 26 0 4 586 1410 126 137 38 chr3LHet 228590 228962 -2326529 - TC1-2_DM DNA Tc1 -11 1633 1225 4 586 1869 147 4 124 chr3LHet 228967 229434 -2326057 - DNAREP1_DM LINE Penelope -150 444 34 4 586 971 76 97 0 chr3LHet 229421 229565 -2325926 + DNAREP1_DM LINE Penelope 397 554 -40 4 586 1305 145 136 14 chr3LHet 229556 229842 -2325649 + DNAREP1_DM LINE Penelope 271 591 -3 4 586 287 175 79 0 chr3LHet 229894 229957 -2325534 + DNAREP1_DM LINE Penelope 498 565 -29 4 586 716 156 130 81 chr3LHet 230865 231088 -2324403 - DNAREP1_DM LINE Penelope -2 592 359 4 586 677 149 0 0 chr3LHet 231093 231214 -2324277 - DNAREP1_DM LINE Penelope -473 121 1 4 586 372 244 55 38 chr3LHet 231439 231622 -2323869 + DNAREP1_DM LINE Penelope 380 565 -29 4 586 826 175 148 23 chr3LHet 232183 232399 -2323092 + DNAREP1_DM LINE Penelope 222 464 -130 4 586 662 138 100 14 chr3LHet 232395 232535 -2322956 + DNAREP1_DM LINE Penelope 207 358 -236 4 586 22 35 0 0 chr3LHet 233258 233287 -2322204 + AT_rich Low_complexity Low_complexity 1 29 0 4 586 400 271 71 33 chr3LHet 235327 235510 -2319981 + BLASTOPIA_I LTR Gypsy 4292 4481 0 4 586 32 0 0 0 chr3LHet 235788 235820 -2319671 + AT_rich Low_complexity Low_complexity 1 32 0 4 586 7710 172 90 8 chr3LHet 236214 237805 -2317686 - Invader3_I LTR Gypsy -2297 2591 871 4 586 3540 143 113 8 chr3LHet 237805 239127 -2316364 - FW_DM LINE Jockey -4 4688 3229 4 586 1149 198 97 0 chr3LHet 239132 239380 -2316111 - Invader3_I LTR Gypsy -4013 875 604 4 586 1627 259 54 4 chr3LHet 239418 239899 -2315592 - Invader3_I LTR Gypsy -4357 531 27 4 586 305 272 50 42 chr3LHet 239909 240028 -2315463 - R1_DM LINE R1 -12 5344 5225 4 586 534 189 82 0 chr3LHet 240089 240211 -2315280 - Invader3_LTR LTR Gypsy -84 214 83 4 586 455 133 0 88 chr3LHet 240290 240381 -2315110 + DNAREP1_DM LINE Penelope 388 470 -124 4 586 25 0 0 0 chr3LHet 241341 241366 -2314125 + AT_rich Low_complexity Low_complexity 1 25 0 4 586 1290 112 253 0 chr3LHet 241600 241885 -2313606 - DNAREP1_DM LINE Penelope 0 594 111 4 586 295 137 0 0 chr3LHet 242025 242076 -2313415 + HMSBEAGLE_I LTR Gypsy 1628 1678 -4851 4 586 472 246 144 10 chr3LHet 242079 242280 -2313211 + HMSBEAGLE_I LTR Gypsy 1648 1875 -4654 4 586 5554 81 87 88 chr3LHet 243146 244301 -2311190 - PROTOP_B DNA P 0 1153 1 4 586 263 275 46 0 chr3LHet 244994 245103 -2310388 + TRAM_I LTR Pao 2111 2224 -484 4 586 253 353 54 13 chr3LHet 245766 245990 -2309501 + DIVER2_I LTR Pao 3522 3754 -393 4 586 2637 112 167 8 chr3LHet 246230 246823 -2308668 + FB4_DM DNA Tc1 47 733 -3356 4 586 281 29 0 0 chr3LHet 246903 246937 -2308554 + FB4_DM DNA Tc1 1042 1075 -3014 4 586 631 129 177 14 chr3LHet 247479 247620 -2307871 + DNAREP1_DM LINE Penelope 139 302 -292 4 586 49 32 0 0 chr3LHet 247779 247842 -2307649 + AT_rich Low_complexity Low_complexity 1 63 0 4 586 6049 98 41 57 chr3LHet 248162 249334 -2306157 + PROTOP_B DNA P 1 1153 0 4 586 300 186 92 11 chr3LHet 249849 249936 -2305555 + DNAREP1_DM LINE Penelope 1 94 -500 4 586 1400 110 18 22 chr3LHet 249969 250247 -2305244 + DNAREP1_DM LINE Penelope 76 327 -267 4 586 24 0 0 0 chr3LHet 250647 250671 -2304820 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 36 0 0 0 chr3LHet 250848 250884 -2304607 + AT_rich Low_complexity Low_complexity 1 36 0 4 586 469 132 60 0 chr3LHet 251462 251545 -2303946 + DNAREP1_DM LINE Penelope 1 88 -506 4 586 744 125 0 30 chr3LHet 251582 251714 -2303777 + DNAREP1_DM LINE Penelope 342 469 -125 4 586 359 77 0 0 chr3LHet 251729 251781 -2303710 + DNAREP1_DM LINE Penelope 543 594 0 4 586 1432 140 23 55 chr3LHet 251904 252214 -2303277 + DM297_LTR LTR Gypsy 3 302 -112 4 586 16708 88 44 18 chr3LHet 252230 254979 -2300512 + DM297_I LTR Gypsy 107 2928 -3239 4 586 2423 75 96 90 chr3LHet 254978 255491 -2300000 + DM297_I LTR Gypsy 3712 4227 -1940 4 586 3448 71 81 0 chr3LHet 255463 255982 -2299509 + DM297_I LTR Gypsy 4804 5364 -803 4 586 1587 144 34 82 chr3LHet 255982 256397 -2299094 + DM297_LTR LTR Gypsy 20 414 0 4 586 1275 113 94 137 chr3LHet 257365 257694 -2297797 + HOBO DNA hAT 1 315 -2701 4 586 2853 99 5 9 chr3LHet 257696 258143 -2297348 + PROTOP DNA P 17 461 -4019 4 586 1476 142 152 15 chr3LHet 258144 258480 -2297011 + HOBO DNA hAT 2635 3016 0 4 586 31 68 0 0 chr3LHet 259499 259558 -2295933 + AT_rich Low_complexity Low_complexity 1 59 0 4 586 581 276 29 24 chr3LHet 259642 259919 -2295572 - GTWIN_I LTR Gypsy -1699 5313 5161 4 586 845 308 34 0 chr3LHet 259940 260266 -2295225 - GTWIN_I LTR Gypsy -2782 3639 3303 4 586 1581 118 111 0 chr3LHet 260266 260555 -2294936 - MAX_LTR LTR Pao 0 321 1 4 73 15141 32 6 17 chr3LHet 260561 262514 -2292977 - MAX_I LTR Pao -2 7912 5983 4 587 14823 25 21 1 chr3LHet 262509 264332 -2291159 - MAX_I LTR Pao -2526 5388 3529 4 587 10654 79 167 177 chr3LHet 264337 267452 -2288039 - MAX_I LTR Pao -4829 3085 1 4 587 1730 117 70 0 chr3LHet 267452 267752 -2287739 - MAX_LTR LTR Pao 0 321 1 4 587 2159 307 21 21 chr3LHet 267752 268702 -2286789 - Gypsy_I LTR Gypsy -3114 3393 2444 4 587 374 299 22 30 chr3LHet 268957 269215 -2286276 - Gypsy4_I LTR Gypsy -4438 1850 1654 4 587 775 299 49 18 chr3LHet 269633 270182 -2285309 - Gypsy3_I LTR Gypsy -4631 1546 882 4 587 659 143 22 8 chr3LHet 271286 271420 -2284071 + DNAREP1_DM LINE Penelope 200 335 -259 4 587 2736 139 84 6 chr3LHet 271441 271989 -2283502 + DNAREP1_DM LINE Penelope 4 594 0 4 587 855 162 0 12 chr3LHet 272005 272167 -2283324 + DMCR1A LINE CR1 1966 2125 -2345 4 587 324 143 0 0 chr3LHet 274789 274845 -2280646 + DNAREP1_DM LINE Penelope 536 591 -3 4 587 30706 1 0 0 chr3LHet 275278 280002 -2275489 + DOC LINE Jockey 4 4725 0 4 587 2071 158 123 125 chr3LHet 280069 280663 -2274828 - DNAREP1_DM LINE Penelope 0 594 2 4 587 22 0 0 0 chr3LHet 280953 280975 -2274516 + AT_rich Low_complexity Low_complexity 1 22 0 4 587 16426 168 102 88 chr3LHet 281028 285225 -2270266 - Gypsy3_I LTR Gypsy -1919 4258 1 4 587 1899 114 68 54 chr3LHet 285309 285848 -2269643 - IDEFIX_LTR LTR Gypsy 0 594 1 4 587 278 119 0 0 chr3LHet 285816 285858 -2269633 + BARI1 DNA Tc1 3 44 -1706 4 587 2940 94 12 33 chr3LHet 285866 286334 -2269157 - QUASIMODO_LTR LTR Gypsy 0 658 63 4 587 2694 13 0 0 chr3LHet 286584 286882 -2268609 - DIVER2_LTR LTR Pao -36 349 52 4 587 3594 30 44 0 chr3LHet 286882 287313 -2268178 - DIVER2_I LTR Pao -75 4072 3623 4 587 3463 27 7 0 chr3LHet 287313 287716 -2267775 - PROTOP_A DNA P 0 1105 700 4 587 5747 25 52 14 chr3LHet 287743 288560 -2266931 - PROTOP DNA P -3727 753 1 4 587 4267 29 6 0 chr3LHet 288560 289048 -2266443 - DIVER2_I LTR Pao -518 3629 3139 4 587 5721 40 55 18 chr3LHet 289045 289786 -2265705 - DIVER2_I LTR Pao -1553 2594 1826 4 587 1310 169 17 53 chr3LHet 289786 290086 -2265405 + Gypsy5_LTR LTR Gypsy 1 289 -141 4 587 23 33 0 0 chr3LHet 290119 290149 -2265342 + AT_rich Low_complexity Low_complexity 1 30 0 4 587 10773 42 39 18 chr3LHet 290227 291598 -2263893 - DIVER2_I LTR Pao -2318 1829 429 4 587 3432 52 33 0 chr3LHet 291836 292261 -2263230 - DIVER2_I LTR Pao -3708 439 1 4 587 3138 48 16 0 chr3LHet 292261 292640 -2262851 - DIVER2_LTR LTR Pao 0 385 1 4 587 28 0 0 0 chr3LHet 292787 292815 -2262676 + AT_rich Low_complexity Low_complexity 1 28 0 4 587 24 53 0 0 chr3LHet 294553 294591 -2260900 + AT_rich Low_complexity Low_complexity 1 38 0 4 587 31 0 0 0 chr3LHet 294615 294646 -2260845 + AT_rich Low_complexity Low_complexity 1 31 0 4 587 5442 45 55 7 chr3LHet 294646 295332 -2260159 - DMCR1A LINE CR1 0 4470 3752 4 587 5711 60 23 27 chr3LHet 295331 296099 -2259392 - DMCR1A LINE CR1 -1144 3326 2562 4 587 1480 67 161 0 chr3LHet 296095 296398 -2259093 - DMCR1A LINE CR1 -2375 2095 1744 4 587 339 105 0 0 chr3LHet 296414 296471 -2259020 + (TAA)n Simple_repeat Simple_repeat 3 59 0 4 587 2018 97 74 3 chr3LHet 296473 296771 -2258720 + MDG1_LTR LTR Gypsy 94 412 -30 4 587 431 168 103 34 chr3LHet 296771 296888 -2258603 + MDG1_I LTR Gypsy 1 125 -6471 4 587 47423 37 16 16 chr3LHet 296888 302805 -2252686 + MDG1_I LTR Gypsy 382 6296 -300 4 587 755 89 6 76 chr3LHet 302774 302932 -2252559 + MDG1_I LTR Gypsy 6450 6596 0 4 587 2397 95 112 10 chr3LHet 302932 303316 -2252175 + MDG1_LTR LTR Gypsy 1 423 -19 4 587 1755 46 32 0 chr3LHet 303306 303523 -2251968 - DMCR1A LINE CR1 -2724 1746 1523 4 587 259 160 60 0 chr3LHet 303569 303619 -2251872 - DM297_LTR LTR Gypsy 0 414 362 4 587 522 104 0 0 chr3LHet 303623 303690 -2251801 + DNAREP1_DM LINE Penelope 13 79 -515 4 587 216 0 0 0 chr3LHet 304823 304847 -2250644 + (AATAG)n Simple_repeat Simple_repeat 4 27 0 4 587 1846 114 77 0 chr3LHet 304914 305212 -2250279 - MAX_LTR LTR Pao 0 321 1 4 587 37087 29 12 8 chr3LHet 305216 309583 -2245908 - MAX_I LTR Pao 0 7914 3529 4 587 2295 52 0 7 chr3LHet 309588 309880 -2245611 - MAX_I LTR Pao -4829 3085 2796 4 587 8569 87 91 53 chr3LHet 309893 311361 -2244130 - MAX_I LTR Pao -5528 2386 864 4 587 845 65 9 0 chr3LHet 311360 311468 -2244023 - MAX_I LTR Pao -7249 665 557 4 587 316 237 0 30 chr3LHet 311714 311814 -2243677 + (TATATG)n Simple_repeat Simple_repeat 6 102 0 4 587 310 326 24 89 chr3LHet 311838 312084 -2243407 - ACCORD2_I LTR Gypsy -6457 755 526 4 587 2180 327 8 17 chr3LHet 312699 313542 -2241949 - MICROPIA_I LTR Gypsy -583 3893 3058 4 587 715 346 34 17 chr3LHet 313548 314072 -2241419 - MICROPIA_I LTR Gypsy -3037 1439 907 4 587 296 286 68 85 chr3LHet 314153 314329 -2241162 - MICROPIA_I LTR Gypsy -4303 173 1 4 587 295 323 41 91 chr3LHet 314356 314598 -2240893 - ACCORD2_I LTR Gypsy -6457 755 526 4 587 6063 5 0 0 chr3LHet 314620 315285 -2240206 - FW_DM LINE Jockey 0 4692 4028 4 587 22218 3 0 0 chr3LHet 315282 317709 -2237782 - FW_DM LINE Jockey -2187 2505 86 4 587 2202 326 8 17 chr3LHet 318270 319113 -2236378 - MICROPIA_I LTR Gypsy -583 3893 3058 4 587 758 292 36 28 chr3LHet 319136 319523 -2235968 + QUASIMODO_I LTR Gypsy 1340 1729 -4331 4 587 683 266 117 31 chr3LHet 319816 320107 -2235384 + IDEFIX_I LTR Gypsy 1429 1744 -3884 4 587 1376 288 70 49 chr3LHet 320100 321018 -2234473 + QUASIMODO_I LTR Gypsy 4505 5441 -619 4 587 24 0 0 0 chr3LHet 321164 321188 -2234303 + AT_rich Low_complexity Low_complexity 1 24 0 4 587 615 170 0 0 chr3LHet 321631 321731 -2233760 - NOMAD_I LTR Gypsy 0 6572 6473 4 587 330 160 0 0 chr3LHet 321747 321797 -2233694 - NOMAD_I LTR Gypsy -491 6081 6032 4 587 5164 162 107 41 chr3LHet 322532 323637 -2231854 - NOMAD_I LTR Gypsy -741 5831 4653 4 587 1985 241 71 50 chr3LHet 323637 324517 -2230974 + Gypsy12A_LTR LTR Gypsy 1 820 -1516 4 587 5530 43 56 1 chr3LHet 324517 325199 -2230292 - DMCR1A LINE CR1 0 4470 3752 4 587 5739 59 32 7 chr3LHet 325198 325878 -2229613 - DMCR1A LINE CR1 -1144 3326 2638 4 587 253 0 54 0 chr3LHet 325878 325915 -2229576 + (TAGTG)n Simple_repeat Simple_repeat 3 41 0 4 587 5739 59 32 7 chr3LHet 325915 325980 -2229511 - DMCR1A LINE CR1 -1833 2637 2562 4 587 6856 57 60 0 chr3LHet 325976 326936 -2228555 - DMCR1A LINE CR1 -2375 2095 1078 4 587 6232 31 11 3 chr3LHet 326934 327671 -2227820 - DMCR1A LINE CR1 -3727 743 1 4 587 2495 175 53 61 chr3LHet 327709 328386 -2227105 + Gypsy12A_LTR LTR Gypsy 760 1431 -849 4 587 2943 114 15 71 chr3LHet 328400 328919 -2226572 + Gypsy12_LTR LTR Gypsy 1847 2336 0 4 587 1710 143 12 0 chr3LHet 328919 329178 -2226313 - NOMAD_I LTR Gypsy -1916 4656 4395 4 587 3402 159 67 2 chr3LHet 329179 329758 -2225733 - NOMAD_I LTR Gypsy -2441 4131 3515 4 587 4102 153 73 4 chr3LHet 329750 330789 -2224702 - NOMAD_I LTR Gypsy -3210 3362 2056 4 587 426 100 14 28 chr3LHet 332432 332504 -2222987 - DMTOM1_LTR LTR Gypsy 0 410 340 4 587 611 180 50 61 chr3LHet 332495 332705 -2222786 - DMTOM1_LTR LTR Gypsy -19 488 284 4 587 859 126 0 77 chr3LHet 332928 333083 -2222408 - DM176_I LTR Gypsy 0 6420 6278 4 587 1115 146 0 5 chr3LHet 333082 333275 -2222216 - DM297_I LTR Gypsy -486 5681 5490 4 587 2792 216 9 9 chr3LHet 333273 333956 -2221535 - DM297_I LTR Gypsy -1433 4734 4052 4 587 1213 313 23 17 chr3LHet 333960 334487 -2221004 - ROVER-I_DM LTR Gypsy -2237 4347 3818 4 587 3297 156 126 1 chr3LHet 334488 335328 -2220163 - NOMAD_I LTR Gypsy -3571 3001 2056 4 587 426 100 14 28 chr3LHet 336971 337043 -2218448 - DMTOM1_LTR LTR Gypsy 0 410 340 4 587 611 180 50 61 chr3LHet 337034 337244 -2218247 - DMTOM1_LTR LTR Gypsy -19 488 284 4 587 859 126 0 77 chr3LHet 337467 337622 -2217869 - DM176_I LTR Gypsy 0 6420 6278 4 587 1115 146 0 5 chr3LHet 337621 337814 -2217677 - DM297_I LTR Gypsy -486 5681 5490 4 587 2811 214 9 9 chr3LHet 337812 338495 -2216996 - DM297_I LTR Gypsy -1433 4734 4052 4 587 7576 294 38 31 chr3LHet 338499 341933 -2213558 - ROVER-I_DM LTR Gypsy -2237 4347 890 4 587 4022 0 0 0 chr3LHet 341988 342416 -2213075 - ROO_LTR LTR Pao 0 428 1 4 587 262 191 43 43 chr3LHet 342441 342556 -2212935 + T-rich Low_complexity Low_complexity 3 117 0 4 587 243 264 116 77 chr3LHet 342774 343127 -2212364 - ROVER-I_DM LTR Gypsy -6217 367 1 4 587 426 100 14 28 chr3LHet 343127 343190 -2212301 - DMTOM1_LTR LTR Gypsy 0 410 349 4 587 585 156 40 16 chr3LHet 343190 343314 -2212177 - DMTOM1_LTR LTR Gypsy 0 410 284 4 587 263 152 87 43 chr3LHet 343331 343400 -2212091 - DM176_LTR LTR Gypsy -141 366 295 4 587 233 200 52 52 chr3LHet 343965 344023 -2211468 - MAX_I LTR Pao -1205 6709 6652 4 587 1299 328 47 22 chr3LHet 344122 344896 -2210595 - DIVER2_I LTR Pao -488 3659 2867 4 587 3493 10 0 3 chr3LHet 345089 345473 -2210018 - DIVER2_LTR LTR Pao 0 385 3 4 587 293 372 13 0 chr3LHet 346341 346494 -2208997 - TRAM_I LTR Pao -550 2158 2004 4 587 192 97 0 0 chr3LHet 346546 346577 -2208914 + (TTTTTA)n Simple_repeat Simple_repeat 6 36 0 4 587 444 121 0 0 chr3LHet 346609 346675 -2208816 - G3_DM LINE Jockey -20 4585 4520 4 587 3199 0 3 0 chr3LHet 346675 347020 -2208471 + Invader4_LTR LTR Gypsy 1 346 0 4 587 10200 8 0 2 chr3LHet 347020 348131 -2207360 + Invader4_I LTR Gypsy 1 1109 -1304 4 587 6546 8 38 0 chr3LHet 348112 348853 -2206638 + Invader4_I LTR Gypsy 1246 2014 -399 4 587 180 0 0 0 chr3LHet 348853 348873 -2206618 + (G)n Simple_repeat Simple_repeat 1 20 0 4 587 3167 14 24 0 chr3LHet 348873 349136 -2206355 + Invader4_I LTR Gypsy 2141 2411 -2 4 587 3239 0 0 0 chr3LHet 349136 349482 -2206009 + Invader4_LTR LTR Gypsy 1 346 0 4 587 2094 33 0 0 chr3LHet 349482 349723 -2205768 - G3_DM LINE Jockey -82 4523 4283 4 587 36488 18 12 5 chr3LHet 349738 353933 -2201558 - G3_DM LINE Jockey -379 4226 1 4 587 4185 288 91 60 chr3LHet 354909 357822 -2197669 + Gypsy4_I LTR Gypsy 674 3852 -2569 4 587 8345 63 92 10 chr3LHet 357851 359752 -2195739 + DMCR1A LINE CR1 2346 4401 -69 4 587 1853 68 109 0 chr3LHet 360155 360475 -2195016 + DOC5_DM LINE Jockey 1 355 -4327 4 587 664 110 15 23 chr3LHet 360474 360604 -2194887 + DOC5_DM LINE Jockey 588 716 -3966 4 587 21434 53 74 39 chr3LHet 360596 363750 -2191741 + DOC5_DM LINE Jockey 1419 4682 0 4 587 24 0 0 0 chr3LHet 363750 363774 -2191717 + AT_rich Low_complexity Low_complexity 1 24 0 4 587 2368 36 45 23 chr3LHet 364482 364791 -2190700 - NINJA_LTR LTR Pao -1 316 1 4 587 23389 26 27 13 chr3LHet 364791 369530 -2185961 - NINJA_I LTR Pao 0 6011 1 4 587 2525 47 0 22 chr3LHet 369531 369854 -2185637 - NINJA_LTR LTR Pao -1 316 1 4 587 1221 321 46 37 chr3LHet 370404 371106 -2184385 - DIVER2_I LTR Pao -508 3639 2932 4 587 298 346 38 22 chr3LHet 372352 372535 -2182956 - DIVER2_I LTR Pao -550 2158 2004 4 587 3391 81 34 4 chr3LHet 372605 373076 -2182415 - G3_DM LINE Jockey -4039 566 82 4 587 5274 56 108 2 chr3LHet 373401 375139 -2180352 + G4_DM LINE Jockey 1902 3856 0 4 587 390 315 13 26 chr3LHet 375366 375519 -2179972 + DIVER2_I LTR Pao 2239 2389 -1758 4 587 511 155 92 15 chr3LHet 375867 375998 -2179493 + Gypsy6_LTR LTR Gypsy 156 296 -111 4 587 482 160 97 22 chr3LHet 376600 376734 -2178757 + Gypsy6_LTR LTR Gypsy 156 299 -108 4 587 795 308 24 24 chr3LHet 377226 377605 -2177886 + DIVER2_I LTR Pao 2981 3359 -788 4 587 2698 69 66 11 chr3LHet 377689 378055 -2177436 + DMCR1A LINE CR1 3584 3969 -501 4 587 396 77 0 0 chr3LHet 378763 378815 -2176676 + DMCR1A LINE CR1 3433 3484 -986 4 587 656 97 0 11 chr3LHet 378818 378912 -2176579 + DMCR1A LINE CR1 3674 3766 -704 4 587 44 63 0 0 chr3LHet 379674 379753 -2175738 + AT_rich Low_complexity Low_complexity 1 79 0 4 587 17298 43 36 7 chr3LHet 379838 382003 -2173488 + DMCR1A LINE CR1 2110 4338 -132 4 587 3345 103 174 0 chr3LHet 382024 382691 -2172800 - ACCORD2_I LTR Gypsy -747 6465 5650 4 587 2695 66 11 0 chr3LHet 382714 383062 -2172429 + Baggins1 LINE LOA 298 649 -4804 4 587 5739 41 88 0 chr3LHet 383095 383807 -2171684 + Baggins1 LINE LOA 2868 3642 -1811 4 587 1675 67 9 0 chr3LHet 383806 384016 -2171475 + Baggins1 LINE LOA 3769 3980 -1473 4 587 345 70 0 0 chr3LHet 384011 384054 -2171437 + Baggins1 LINE LOA 4495 4537 -916 4 587 5543 53 42 1 chr3LHet 384051 384744 -2170747 + Baggins1 LINE LOA 4733 5453 0 4 587 18749 78 119 13 chr3LHet 384756 387561 -2167930 - ACCORD2_I LTR Gypsy -1584 5628 2528 4 587 617 103 62 0 chr3LHet 387735 387832 -2167659 - DMRT1A LINE R1 -1 5182 5080 4 587 1374 110 250 0 chr3LHet 387843 388307 -2167184 - DMRT1A LINE R1 -258 4925 4346 4 587 4749 105 184 18 chr3LHet 388304 389125 -2166366 - DMRT1A LINE R1 -953 4230 3274 4 587 7905 100 58 0 chr3LHet 389140 390285 -2165206 - DMRT1A LINE R1 -2974 2209 999 4 587 308 131 0 16 chr3LHet 390283 390345 -2165146 - DMRT1A LINE R1 -4596 587 527 4 587 6019 63 50 0 chr3LHet 390340 391147 -2164344 - DMRT1B LINE R1 -216 4967 4121 4 587 808 97 0 9 chr3LHet 391135 391249 -2164242 - DMRT1B LINE R1 -2121 3062 2950 4 587 230 65 0 0 chr3LHet 391262 391293 -2164198 - DMRT1A LINE R1 -5150 33 3 4 587 1379 117 56 65 chr3LHet 391309 391630 -2163861 - ACCORD2_I LTR Gypsy -5338 1874 1557 4 587 30 0 0 0 chr3LHet 391662 391692 -2163799 + AT_rich Low_complexity Low_complexity 1 30 0 4 587 5892 87 1 31 chr3LHet 391754 392623 -2162868 - ACCORD2_I LTR Gypsy -4619 2593 1751 4 587 1931 138 142 21 chr3LHet 392634 393186 -2162305 - ACCORD2_I LTR Gypsy -5845 1367 517 4 73 6969 150 20 4 chr3LHet 393164 394279 -2161212 - Gypsy5_I LTR Gypsy -3006 3503 2371 4 588 926 207 105 67 chr3LHet 394270 394642 -2160849 - Gypsy5_I LTR Gypsy -6086 423 38 4 588 328 115 19 37 chr3LHet 395685 395739 -2159752 - Gypsy5_I LTR Gypsy -6456 53 1 4 588 24 32 0 0 chr3LHet 395816 395847 -2159644 + AT_rich Low_complexity Low_complexity 1 31 0 4 588 15177 57 46 38 chr3LHet 395860 398062 -2157429 - DOC5_DM LINE Jockey -1045 3637 1419 4 588 2791 70 3 8 chr3LHet 398054 398441 -2157050 - DOC5_DM LINE Jockey -3966 716 332 4 588 9868 15 0 0 chr3LHet 398441 399546 -2155945 - PROTOP_A DNA P 0 1105 1 4 588 2163 51 72 19 chr3LHet 399546 399865 -2155626 - DOC5_DM LINE Jockey -4344 338 3 4 588 767 339 58 24 chr3LHet 400214 400715 -2154776 + NINJA_I LTR Pao 4781 5298 -713 4 588 564 78 0 0 chr3LHet 400961 401038 -2154453 - DMRT1B LINE R1 0 5183 5107 4 588 2153 142 120 2 chr3LHet 401047 401973 -2153518 - DMRT1B LINE R1 -418 4765 3703 4 588 2520 56 44 0 chr3LHet 401971 402292 -2153199 - DMRT1B LINE R1 -1899 3284 2950 4 588 230 65 0 0 chr3LHet 402305 402336 -2153155 - DMRT1A LINE R1 -5150 33 3 4 588 1238 132 47 89 chr3LHet 402350 402731 -2152760 - ACCORD2_I LTR Gypsy -5338 1874 1510 4 588 5892 87 1 31 chr3LHet 402794 403663 -2151828 - ACCORD2_I LTR Gypsy -4619 2593 1751 4 588 932 127 20 61 chr3LHet 403674 403870 -2151621 - ACCORD2_I LTR Gypsy -5845 1367 1204 4 588 868 142 0 7 chr3LHet 403869 404004 -2151487 - ACCORD2_I LTR Gypsy -6584 628 495 4 588 3284 164 134 25 chr3LHet 404008 405404 -2150087 + FW3_DM LINE Jockey 1 2171 -2554 4 588 11096 43 19 1 chr3LHet 405404 406740 -2148751 + TC1_DM DNA Tc1 1 1360 -306 4 588 832 29 10 0 chr3LHet 406730 406832 -2148659 + TC1_DM DNA Tc1 1564 1666 0 4 588 6820 71 31 83 chr3LHet 406832 407899 -2147592 + FW3_DM LINE Jockey 1302 2312 -820 4 588 729 79 20 0 chr3LHet 407900 408001 -2147490 - FW3_DM LINE Jockey -707 2425 2323 4 588 1091 139 139 5 chr3LHet 408937 409146 -2146345 + DNAREP1_DM LINE Penelope 209 445 -149 4 588 291 302 18 36 chr3LHet 409147 409257 -2146234 + Gypsy10_I LTR Gypsy 2369 2476 -2802 4 588 470 323 119 20 chr3LHet 409310 409664 -2145827 + Gypsy_DS LTR Gypsy 3296 3684 -3838 4 588 1448 134 65 16 chr3LHet 409937 410244 -2145247 + DNAREP1_DM LINE Penelope 1 360 -234 4 588 201 74 0 0 chr3LHet 410874 410901 -2144590 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 588 526 51 13 13 chr3LHet 411278 411357 -2144134 + (TA)n Simple_repeat Simple_repeat 1 79 0 4 588 1003 153 6 0 chr3LHet 411359 411522 -2143969 - Gypsy2_LTR LTR Gypsy -161 192 29 4 588 939 123 97 0 chr3LHet 411526 411681 -2143810 - Gypsy2_I LTR Gypsy -175 5960 5791 4 588 9428 12 29 0 chr3LHet 411681 412755 -2142736 - PROTOP_A DNA P 0 1105 1 4 588 2651 88 22 6 chr3LHet 412755 413120 -2142371 - Gypsy2_I LTR Gypsy -338 5797 5427 4 588 1035 97 13 13 chr3LHet 413119 413276 -2142215 - Gypsy2_I LTR Gypsy -864 5271 5115 4 588 3955 107 278 62 chr3LHet 413265 414077 -2141414 - Gypsy2_I LTR Gypsy -1390 4745 3758 4 588 12821 175 83 61 chr3LHet 414076 417236 -2138255 - Gypsy2_I LTR Gypsy -2587 3548 319 4 588 747 186 162 0 chr3LHet 417229 417396 -2138095 - Gypsy2_LTR LTR Gypsy -159 194 1 4 588 2231 66 65 19 chr3LHet 417940 418263 -2137228 + DOC3_DM LINE Jockey 3374 3711 -1029 4 588 5777 49 14 3 chr3LHet 418261 418974 -2136517 - DMCR1A LINE CR1 -1837 2633 1913 4 588 559 343 57 16 chr3LHet 419064 419449 -2136042 + Gypsy12_I LTR Gypsy 2959 3359 -2187 4 588 6768 42 71 1 chr3LHet 419690 420679 -2134812 - DMCR1A LINE CR1 -1098 3372 2315 4 588 2297 63 123 0 chr3LHet 421571 421888 -2133603 - HELENA_RT LINE Jockey -327 990 635 4 588 302 176 53 26 chr3LHet 421993 422069 -2133422 - DM412B_LTR LTR Gypsy -262 309 232 4 588 423 365 42 11 chr3LHet 422110 422395 -2133096 - Ulysses_I LTR Gypsy -637 5744 5451 4 588 315 269 130 8 chr3LHet 422815 422946 -2132545 - Ulysses_I LTR Gypsy -1614 4767 4621 4 588 590 153 248 25 chr3LHet 423832 423993 -2131498 + DMCR1A LINE CR1 1272 1468 -3002 4 588 483 182 0 0 chr3LHet 423999 424076 -2131415 + DMCR1A LINE CR1 1698 1774 -2696 4 588 1199 114 180 0 chr3LHet 424073 424284 -2131207 + DMCR1A LINE CR1 1994 2242 -2228 4 588 14110 66 65 10 chr3LHet 424289 426237 -2129254 + DMCR1A LINE CR1 2346 4401 -69 4 588 2245 66 109 0 chr3LHet 426640 426960 -2128531 + DOC5_DM LINE Jockey 1 355 -4327 4 588 664 110 15 23 chr3LHet 426959 427089 -2128402 + DOC5_DM LINE Jockey 588 716 -3966 4 588 21277 49 85 41 chr3LHet 427081 430206 -2125285 + DOC5_DM LINE Jockey 1419 4682 0 4 588 1006 318 117 25 chr3LHet 431110 431836 -2123655 - DIVER2_I LTR Pao -488 3659 2867 4 588 374 359 116 5 chr3LHet 432919 433291 -2122200 - DIVER2_I LTR Pao -2325 1822 1410 4 588 3034 95 75 2 chr3LHet 433191 433643 -2121848 - G3_DM LINE Jockey -4039 566 82 4 588 16539 26 20 1 chr3LHet 433773 435708 -2119783 + TRANSIB2 DNA Transib 1 1973 -871 4 588 3063 26 0 0 chr3LHet 435705 436054 -2119437 + TRANSIB2 DNA Transib 1763 2111 -733 4 588 1533 23 0 0 chr3LHet 436102 436275 -2119216 + TRANSIB2 DNA Transib 2672 2844 0 4 588 22 0 0 0 chr3LHet 436400 436422 -2119069 + AT_rich Low_complexity Low_complexity 1 22 0 4 588 4986 69 63 0 chr3LHet 436464 437127 -2118364 + DMRT1B LINE R1 3371 4075 -1108 4 588 8658 51 71 2 chr3LHet 437124 438225 -2117266 + DMCR1A LINE CR1 13 1189 -3281 4 588 4685 54 12 0 chr3LHet 438230 438804 -2116687 + DMCR1A LINE CR1 1878 2458 -2012 4 588 1345 72 0 0 chr3LHet 439055 439221 -2116270 + DMCR1A LINE CR1 1024 1189 -3281 4 588 4685 54 12 0 chr3LHet 439226 439800 -2115691 + DMCR1A LINE CR1 1878 2458 -2012 4 588 12738 62 24 10 chr3LHet 444258 446021 -2109470 + DMCR1A LINE CR1 2455 4242 -228 4 588 1371 172 19 4 chr3LHet 446088 446350 -2109141 + MICROPIA_I LTR Gypsy 273 538 -3938 4 588 8930 39 2 0 chr3LHet 446544 447695 -2107796 + PROTOP_B DNA P 1 1153 0 4 588 1943 80 0 0 chr3LHet 447851 448137 -2107354 - Jockey2 LINE Jockey -21 3407 3122 4 588 2520 56 96 8 chr3LHet 448135 448512 -2106979 - Jockey2 LINE Jockey -513 2915 2506 4 588 12738 62 24 10 chr3LHet 451698 453461 -2102030 + DMCR1A LINE CR1 2455 4242 -228 4 588 1371 172 19 4 chr3LHet 453528 453790 -2101701 + MICROPIA_I LTR Gypsy 273 538 -3938 4 588 8930 39 2 0 chr3LHet 453984 455135 -2100356 + PROTOP_B DNA P 1 1153 0 4 588 1943 80 0 0 chr3LHet 455291 455577 -2099914 - Jockey2 LINE Jockey -21 3407 3122 4 588 4095 54 156 0 chr3LHet 455575 456264 -2099227 - Jockey2 LINE Jockey -513 2915 2120 4 588 2424 107 21 3 chr3LHet 456275 456659 -2098832 - Jockey2 LINE Jockey -1477 1951 1561 4 588 905 113 9 8 chr3LHet 457015 457192 -2098299 - Jockey2 LINE Jockey -2111 1317 1187 4 588 348 43 0 0 chr3LHet 457220 457266 -2098225 - Jockey2 LINE Jockey -2852 576 531 4 588 1469 304 45 30 chr3LHet 457263 457976 -2097515 - LINEJ1_DM LINE Jockey -3342 1678 955 4 588 201 74 0 0 chr3LHet 459956 459983 -2095508 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 588 444 19 0 0 chr3LHet 460359 460412 -2095079 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 588 930 153 6 0 chr3LHet 460414 460577 -2094914 - Gypsy2_LTR LTR Gypsy -161 192 29 4 588 865 123 97 0 chr3LHet 460581 460736 -2094755 - Gypsy2_I LTR Gypsy -175 5960 5791 4 588 4814 38 75 28 chr3LHet 460736 461709 -2093782 - PROTOP_A DNA P 0 1105 87 4 588 805 122 20 13 chr3LHet 461692 461842 -2093649 - Gypsy2_I LTR Gypsy -870 5265 5115 4 588 332 125 31 15 chr3LHet 461831 461896 -2093595 - Gypsy2_I LTR Gypsy -1390 4745 4680 4 588 4817 282 98 19 chr3LHet 461939 463882 -2091609 - Gypsy3_I LTR Gypsy -1612 4565 2470 4 588 989 154 39 59 chr3LHet 464034 464289 -2091202 - Gypsy5_LTR LTR Gypsy -180 250 1 4 588 5106 155 12 0 chr3LHet 464289 465205 -2090286 - Gypsy5_I LTR Gypsy 0 6509 5583 4 588 10564 151 63 3 chr3LHet 465206 467195 -2088296 - Gypsy5_I LTR Gypsy -1485 5024 2917 4 588 1933 132 149 0 chr3LHet 467197 467707 -2087784 - Gypsy5_I LTR Gypsy -3747 2762 2177 4 588 7078 186 16 17 chr3LHet 467705 469245 -2086246 - Gypsy5_I LTR Gypsy -4934 1575 38 4 588 2182 24 13 0 chr3LHet 469362 469884 -2085607 - TRANSIB2 DNA Transib 0 2844 2235 4 588 6543 33 12 1 chr3LHet 469884 470728 -2084763 - TRANSIB2 DNA Transib -1991 853 1 4 588 336 77 19 37 chr3LHet 471498 471552 -2083939 - Gypsy5_I LTR Gypsy -6456 53 1 4 588 24 32 0 0 chr3LHet 471630 471661 -2083830 + AT_rich Low_complexity Low_complexity 1 31 0 4 588 1025 184 20 53 chr3LHet 471694 471993 -2083498 - Gypsy5_LTR LTR Gypsy -141 289 1 4 588 10539 39 6 5 chr3LHet 471993 473335 -2082156 + G5A_DM LINE Jockey 1496 2838 -3 4 588 1046 115 93 93 chr3LHet 473375 473719 -2081772 - STALKER4_I LTR Gypsy -55 6475 6132 4 588 3907 34 0 2 chr3LHet 473719 474218 -2081273 - PROTOP_A DNA P 0 1105 608 4 588 2272 11 0 0 chr3LHet 474218 474484 -2081007 + Invader2_LTR LTR Gypsy 1 266 0 4 588 477 47 47 0 chr3LHet 474499 474584 -2080907 - PROTOP DNA P -3733 747 659 4 588 4361 25 26 19 chr3LHet 474583 475151 -2080340 - PROTOP_A DNA P -533 572 1 4 588 12623 87 32 3 chr3LHet 475151 477081 -2078410 - STALKER4_I LTR Gypsy -388 6142 4155 4 588 4366 61 102 29 chr3LHet 477096 478033 -2077458 - PROTOP_B DNA P -194 959 20 4 588 234 62 0 0 chr3LHet 478033 478065 -2077426 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 588 336 77 19 37 chr3LHet 478140 478194 -2077297 - Gypsy5_I LTR Gypsy -6456 53 1 4 588 24 32 0 0 chr3LHet 478272 478303 -2077188 + AT_rich Low_complexity Low_complexity 1 31 0 4 588 1096 180 20 53 chr3LHet 478336 478635 -2076856 - Gypsy5_LTR LTR Gypsy -141 289 1 4 588 1497 107 134 0 chr3LHet 478676 478929 -2076562 - Gypsy2_I LTR Gypsy -4442 1693 1407 4 588 729 184 150 6 chr3LHet 479045 479225 -2076266 - Gypsy2_LTR LTR Gypsy -147 206 1 4 588 25 31 0 0 chr3LHet 479446 479478 -2076013 + AT_rich Low_complexity Low_complexity 1 32 0 4 588 358 270 18 9 chr3LHet 479773 479885 -2075606 + PROTOP_B DNA P 64 176 -977 4 588 5387 99 57 1 chr3LHet 480225 481084 -2074407 - S_DM DNA Tc1 -637 1099 193 4 588 450 138 0 0 chr3LHet 481076 481156 -2074335 + S_DM DNA Tc1 1657 1736 0 4 588 1148 167 139 43 chr3LHet 481156 481593 -2073898 - DNAREP1_DM LINE Penelope -108 486 8 4 588 2037 138 107 114 chr3LHet 481649 482247 -2073244 - DNAREP1_DM LINE Penelope 0 594 1 4 588 45 69 0 0 chr3LHet 482259 482346 -2073145 + AT_rich Low_complexity Low_complexity 1 87 0 4 588 5516 48 15 7 chr3LHet 482600 483330 -2072161 - DMCR1A LINE CR1 -2909 1561 826 4 588 5506 42 0 11 chr3LHet 483328 484050 -2071441 - DMCR1A LINE CR1 -3755 715 2 4 588 461 62 0 0 chr3LHet 484063 484128 -2071363 - Jockey2 LINE Jockey -158 3270 3206 4 588 1909 89 93 27 chr3LHet 484142 484442 -2071049 - Jockey2 LINE Jockey -2245 1183 864 4 588 822 87 495 0 chr3LHet 484441 484691 -2070800 - Jockey2 LINE Jockey -2669 759 386 4 588 383 333 40 28 chr3LHet 484690 484940 -2070551 - LINEJ1_DM LINE Jockey -3814 1206 954 4 588 412 66 16 0 chr3LHet 485244 485305 -2070186 - Jockey2 LINE Jockey -3118 310 249 4 588 539 165 17 0 chr3LHet 485418 485533 -2069958 - Jockey2 LINE Jockey -2017 1411 1295 4 588 480 141 0 0 chr3LHet 485511 485596 -2069895 - Jockey2 LINE Jockey -3178 250 166 4 588 268 182 7 219 chr3LHet 485638 485793 -2069698 - R1-2_DM LINE R1 -338 5018 4897 4 588 6200 140 50 4 chr3LHet 486141 487447 -2068044 - R1-2_DM LINE R1 -930 4426 2356 4 588 3703 107 197 6 chr3LHet 487503 488730 -2066761 - R1-2_DM LINE R1 -3135 2221 365 4 588 1557 79 13 17 chr3LHet 488706 488937 -2066554 - R1-2_DM LINE R1 -2986 230 1 4 588 2963 100 106 19 chr3LHet 489007 489536 -2065955 - DNAREP1_DM LINE Penelope -19 575 1 4 588 28 48 0 0 chr3LHet 490343 490385 -2065106 + AT_rich Low_complexity Low_complexity 1 42 0 4 588 272 240 78 64 chr3LHet 490385 490666 -2064825 + MAX_LTR LTR Pao 3 287 -34 4 588 494 207 60 0 chr3LHet 490769 490885 -2064606 + MAX_I LTR Pao 66 188 -7726 4 588 247 269 26 80 chr3LHet 491009 491122 -2064369 + BS3_DM LINE Jockey 822 928 -862 4 588 252 109 0 21 chr3LHet 491673 491720 -2063771 + DM297_LTR LTR Gypsy 283 328 -86 4 588 663 184 44 40 chr3LHet 491772 491998 -2063493 + DM297_I LTR Gypsy 1 227 -5940 4 588 946 125 0 0 chr3LHet 492121 492281 -2063210 + DNAREP1_DM LINE Penelope 99 258 -336 4 588 1819 76 11 11 chr3LHet 492288 492554 -2062937 + R1-2_DM LINE R1 1026 1291 -1925 4 588 4209 183 15 22 chr3LHet 492553 493492 -2061999 + DM297_I LTR Gypsy 520 1451 -4716 4 588 419 147 10 21 chr3LHet 493532 493629 -2061862 + Invader2_LTR LTR Gypsy 132 227 -39 4 588 787 108 0 0 chr3LHet 493648 493768 -2061723 + Invader2_I LTR Gypsy 495 614 -3978 4 588 3325 86 113 6 chr3LHet 493770 494308 -2061183 + Invader2_I LTR Gypsy 886 1481 -3111 4 588 4433 87 52 42 chr3LHet 494510 495282 -2060209 + Invader2_I LTR Gypsy 3450 4229 -363 4 588 1829 51 157 25 chr3LHet 495300 495839 -2059652 + DMCR1A LINE CR1 7 665 -3805 4 588 8894 16 0 0 chr3LHet 495843 496904 -2058587 - FW_DM LINE Jockey 0 4692 3632 4 588 1047 98 110 85 chr3LHet 496908 497154 -2058337 + Invader2_I LTR Gypsy 3978 4229 -363 4 588 1829 51 157 25 chr3LHet 497172 497711 -2057780 + DMCR1A LINE CR1 7 665 -3805 4 588 5882 17 53 1 chr3LHet 497714 499105 -2056386 - FW_DM LINE Jockey 0 4692 3229 4 588 7358 8 22 3 chr3LHet 499110 500000 -2055491 + DMRT1A LINE R1 1280 2186 -2997 4 588 25628 18 28 0 chr3LHet 500000 502909 -2052582 + DMRT1A LINE R1 2187 5176 -7 4 588 14854 25 39 0 chr3LHet 502908 504675 -2050816 - FW_DM LINE Jockey -1459 3233 1398 4 588 6701 17 0 3 chr3LHet 504671 505429 -2050062 - FW_DM LINE Jockey -3936 756 1 4 588 835 11 0 0 chr3LHet 505456 505546 -2049945 + DMCR1A LINE CR1 654 743 -3727 4 588 5480 48 18 5 chr3LHet 505544 506855 -2048636 + DMCR1A LINE CR1 1078 2485 -1985 4 588 11833 62 73 11 chr3LHet 506872 508478 -2047013 + DMCR1A LINE CR1 2537 4242 -228 4 588 1481 171 19 4 chr3LHet 508545 508803 -2046688 + MICROPIA_I LTR Gypsy 273 534 -3942 4 588 3268 29 5 0 chr3LHet 508803 509180 -2046311 + STALKER4_LTR LTR Gypsy 1 379 -23 4 588 28 48 0 0 chr3LHet 509318 509360 -2046131 + AT_rich Low_complexity Low_complexity 1 42 0 4 588 2137 185 51 29 chr3LHet 509367 509879 -2045612 + Stalker2_I LTR Gypsy 291 813 -6589 4 588 31063 8 6 1 chr3LHet 509876 509888 -2045603 + STALKER4_I LTR Gypsy 2990 3002 -3528 4 588 281 47 0 23 chr3LHet 509888 509932 -2045559 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 4 588 31063 8 6 1 chr3LHet 509932 513445 -2042046 + STALKER4_I LTR Gypsy 3003 6530 0 4 588 3393 51 1 14 chr3LHet 513445 513884 -2041607 + STALKER4_LTR LTR Gypsy 1 399 -3 4 588 3456 19 0 48 chr3LHet 514032 514470 -2041021 - ROO_I LTR Pao -6167 2089 1673 4 588 1835 123 70 0 chr3LHet 514470 514770 -2040721 + MAX_LTR LTR Pao 1 321 0 4 588 2856 47 36 87 chr3LHet 514770 515209 -2040282 + MAX_I LTR Pao 1 417 -7497 4 588 1807 112 19 60 chr3LHet 515241 515556 -2039935 + Gypsy6A_LTR LTR Gypsy 1 302 -118 4 588 34 24 0 0 chr3LHet 515783 515824 -2039667 + AT_rich Low_complexity Low_complexity 1 41 0 4 588 2296 314 12 14 chr3LHet 516070 516867 -2038624 + Gypsy6_I LTR Gypsy 910 1705 -5307 4 588 3578 276 9 18 chr3LHet 516891 517903 -2037588 + Gypsy6_I LTR Gypsy 1984 2986 -4026 4 589 909 181 106 0 chr3LHet 531907 532106 -2023385 + MAX_LTR LTR Pao 102 321 0 4 589 9166 37 80 36 chr3LHet 532106 533094 -2022397 - ROO_I LTR Pao -6579 1677 730 4 589 492 132 0 0 chr3LHet 533094 533177 -2022314 + (CTG)n Simple_repeat Simple_repeat 1 83 0 4 589 9166 84 55 47 chr3LHet 533177 533766 -2021725 - ROO_I LTR Pao -7527 729 1 4 589 3443 24 41 12 chr3LHet 533766 534182 -2021309 - ROO_LTR LTR Pao 0 428 1 4 589 8349 48 15 0 chr3LHet 534182 535201 -2020290 + DMCR1A LINE CR1 2318 3351 -1119 4 589 1867 120 70 0 chr3LHet 535201 535501 -2019990 - MAX_LTR LTR Pao 0 321 1 4 589 58586 45 13 59 chr3LHet 535507 543927 -2011564 - MAX_I LTR Pao -2 7912 1 4 589 1855 123 70 0 chr3LHet 543927 544227 -2011264 - MAX_LTR LTR Pao 0 321 1 4 589 259 294 47 0 chr3LHet 544443 544528 -2010963 - Gypsy12_I LTR Gypsy -2139 3407 3319 4 589 16968 47 42 9 chr3LHet 544962 547115 -2008376 + DMCR1A LINE CR1 1913 4136 -334 4 589 1202 313 51 16 chr3LHet 548128 548677 -2006814 + Gypsy4_I LTR Gypsy 576 1143 -5145 4 589 1114 115 88 16 chr3LHet 548700 548894 -2006597 + DMCR1A LINE CR1 454 661 -3809 4 589 804 314 119 32 chr3LHet 548896 549636 -2005855 + Gypsy4_I LTR Gypsy 1220 2220 -3058 4 589 7088 279 65 12 chr3LHet 549646 552049 -2003442 + Gypsy4_I LTR Gypsy 2144 4673 -1615 4 589 2473 318 48 18 chr3LHet 552123 553320 -2002171 + Gypsy4_I LTR Gypsy 4871 6102 -186 4 589 24 0 0 0 chr3LHet 553591 553615 -2001876 + AT_rich Low_complexity Low_complexity 1 24 0 4 589 1387 79 164 4 chr3LHet 553682 553963 -2001528 + DMCR1A LINE CR1 4145 4470 0 4 589 1735 130 115 0 chr3LHet 553951 554289 -2001202 + Invader2_I LTR Gypsy 4216 4592 0 4 589 712 145 136 140 chr3LHet 554289 554554 -2000937 + Invader2_LTR LTR Gypsy 1 264 -2 4 589 379 189 0 0 chr3LHet 554554 554619 -2000872 + DM297_I LTR Gypsy 1931 1995 -4172 4 589 746 304 90 19 chr3LHet 554645 555023 -2000468 - NINJA_I LTR Pao -768 5243 4839 4 589 2769 320 69 10 chr3LHet 555138 556349 -1999142 - NINJA_I LTR Pao -1313 4698 3416 4 589 2243 315 78 29 chr3LHet 556384 558488 -1997003 - NINJA_I LTR Pao -2672 3339 1045 4 589 1195 106 0 0 chr3LHet 559518 559706 -1995785 + DM297_I LTR Gypsy 2137 2324 -3843 4 589 347 259 46 9 chr3LHet 560349 560458 -1995033 - FW_DM LINE Jockey -2306 2386 2274 4 589 628 287 44 9 chr3LHet 560496 560813 -1994678 - TOM_I LTR Gypsy -567 5545 5218 4 589 8895 17 2 14 chr3LHet 560830 561949 -1993542 + PROTOP_A DNA P 1 1105 0 4 589 489 153 9 43 chr3LHet 562091 562207 -1993284 - DNAREP1_DM LINE Penelope -260 334 223 4 589 215 0 67 0 chr3LHet 562529 562559 -1992932 + (TTTAA)n Simple_repeat Simple_repeat 1 32 0 4 589 238 238 94 47 chr3LHet 562559 562687 -1992804 - QUASIMODO_LTR LTR Gypsy -446 212 79 4 589 7705 32 54 23 chr3LHet 562759 563831 -1991660 - PROTOP_A DNA P 0 1105 1 4 589 24 32 0 0 chr3LHet 564338 564369 -1991122 + AT_rich Low_complexity Low_complexity 1 31 0 4 589 21 36 0 0 chr3LHet 564504 564532 -1990959 + AT_rich Low_complexity Low_complexity 1 28 0 4 589 21 0 0 0 chr3LHet 564765 564786 -1990705 + AT_rich Low_complexity Low_complexity 1 21 0 4 589 8094 18 9 0 chr3LHet 565918 566904 -1988587 + ROO_I LTR Pao 1673 2667 -5589 4 589 2257 4 4 0 chr3LHet 566904 567170 -1988321 - MDG3_LTR LTR Gypsy 0 267 1 4 589 42377 1 7 0 chr3LHet 567170 572124 -1983367 - MDG3_I LTR Gypsy 0 4986 1 4 589 2257 4 4 0 chr3LHet 572123 572389 -1983102 - MDG3_LTR LTR Gypsy 0 267 1 4 589 32337 24 19 1 chr3LHet 572389 577885 -1977606 + ROO_I LTR Pao 2664 8256 0 4 589 3338 21 21 16 chr3LHet 577885 578311 -1977180 + ROO_LTR LTR Pao 1 428 0 4 589 5297 57 121 0 chr3LHet 578311 579421 -1976070 - DMCR1A LINE CR1 -2148 2322 1078 4 589 3419 31 62 10 chr3LHet 579419 580107 -1975384 - DMCR1A LINE CR1 -3727 743 20 4 589 55 29 0 0 chr3LHet 580123 580192 -1975299 + AT_rich Low_complexity Low_complexity 1 69 0 4 589 234 160 60 0 chr3LHet 580250 580300 -1975191 - DM297_LTR LTR Gypsy 0 414 362 4 589 516 73 0 0 chr3LHet 580308 580376 -1975115 + DNAREP1_DM LINE Penelope 17 84 -510 4 589 961 221 5 0 chr3LHet 580511 580715 -1974776 - Gypsy3_I LTR Gypsy -299 5878 5674 4 589 3702 232 65 1 chr3LHet 580732 581650 -1973841 - Gypsy3_I LTR Gypsy -396 6616 4936 4 589 585 99 11 11 chr3LHet 581638 581730 -1973761 - Gypsy3_I LTR Gypsy -1549 4628 4537 4 589 1630 103 103 0 chr3LHet 581738 582009 -1973482 - Gypsy3_I LTR Gypsy -1745 4432 4134 4 589 556 111 0 22 chr3LHet 582008 582100 -1973391 - Gypsy3_I LTR Gypsy -2936 3241 3152 4 589 237 33 0 0 chr3LHet 582078 582108 -1973383 - Gypsy3_I LTR Gypsy -3426 2751 2722 4 589 2004 141 300 12 chr3LHet 582127 582932 -1972559 - Gypsy3_I LTR Gypsy -4223 1954 918 4 589 1402 215 55 91 chr3LHet 582943 583506 -1971985 - Gypsy3_I LTR Gypsy -5460 717 175 4 589 36 62 0 0 chr3LHet 583506 583570 -1971921 + AT_rich Low_complexity Low_complexity 1 64 0 4 589 665 170 30 133 chr3LHet 583620 583884 -1971607 - Gypsy3_LTR LTR Gypsy -161 237 1 4 589 790 109 229 37 chr3LHet 584020 584286 -1971205 - DNAREP1_DM LINE Penelope -44 550 196 4 589 1679 53 136 0 chr3LHet 584305 584548 -1970943 - DOC3_DM LINE Jockey -441 4299 4024 4 589 13750 46 21 0 chr3LHet 584544 586324 -1969167 - DOC3_DM LINE Jockey -1153 3587 1771 4 589 11220 20 20 0 chr3LHet 586318 587698 -1967793 - FW_DM LINE Jockey 0 4692 3286 4 589 9033 17 28 0 chr3LHet 587697 588568 -1966923 - FW_DM LINE Jockey -1595 3097 2203 4 589 180 0 0 0 chr3LHet 588568 588588 -1966903 + (G)n Simple_repeat Simple_repeat 1 20 0 4 589 15060 26 37 7 chr3LHet 588588 590721 -1964770 - FW_DM LINE Jockey -2490 2202 5 4 589 4728 58 69 8 chr3LHet 590727 591672 -1963819 - DOC3_DM LINE Jockey -2969 1771 770 4 589 662 128 250 0 chr3LHet 591709 591865 -1963626 + DNAREP1_DM LINE Penelope 138 332 -262 4 589 1334 112 137 65 chr3LHet 592240 592547 -1962944 - DNAREP1_DM LINE Penelope -264 330 2 4 589 25 31 0 0 chr3LHet 592842 592874 -1962617 + AT_rich Low_complexity Low_complexity 1 32 0 4 589 23 33 0 0 chr3LHet 593214 593244 -1962247 + AT_rich Low_complexity Low_complexity 1 30 0 4 589 180 0 114 0 chr3LHet 594157 594192 -1961299 + (TTATA)n Simple_repeat Simple_repeat 1 39 0 4 589 29 60 0 0 chr3LHet 594507 594557 -1960934 + AT_rich Low_complexity Low_complexity 1 50 0 4 589 28 0 0 0 chr3LHet 594569 594597 -1960894 + AT_rich Low_complexity Low_complexity 1 28 0 4 589 21 71 0 0 chr3LHet 594651 594693 -1960798 + AT_rich Low_complexity Low_complexity 1 42 0 4 589 1421 95 133 0 chr3LHet 599059 599463 -1956028 - DNAREP1_DM LINE Penelope 0 594 1 4 589 35 54 0 0 chr3LHet 600436 600492 -1954999 + AT_rich Low_complexity Low_complexity 1 56 0 4 589 1631 108 104 7 chr3LHet 601915 602214 -1953277 - DOC LINE Jockey -199 4526 4199 4 589 2078 178 94 1 chr3LHet 602224 602817 -1952674 - DOC LINE Jockey -967 3773 3071 4 589 614 108 0 0 chr3LHet 602862 602955 -1952536 - DOC LINE Jockey -1976 2749 2657 4 589 281 26 0 0 chr3LHet 602959 602997 -1952494 - DOC LINE Jockey -2254 2471 2434 4 589 2937 98 221 0 chr3LHet 602996 603556 -1951935 - DOC LINE Jockey -2472 2253 1570 4 589 294 0 0 0 chr3LHet 603566 603601 -1951890 - DOC LINE Jockey -3322 1403 1369 4 589 1791 123 147 27 chr3LHet 603598 603966 -1951525 - DOC LINE Jockey -4063 662 251 4 589 244 367 29 18 chr3LHet 603958 604230 -1951261 + DIVER2_I LTR Pao 1482 1756 -2391 4 589 460 58 0 68 chr3LHet 604358 604432 -1951059 + DMCR1A LINE CR1 4402 4470 0 4 589 670 186 115 26 chr3LHet 604512 604854 -1950637 - DNAREP1_DM LINE Penelope -262 332 88 4 589 227 274 0 0 chr3LHet 605145 605196 -1950295 + NINJA_I LTR Pao 2991 3041 -2970 4 589 2060 92 67 12 chr3LHet 606832 607173 -1948318 - TC1-2_DM DNA Tc1 -409 1235 876 4 589 287 120 40 0 chr3LHet 607178 607228 -1948263 + FB4_DM DNA Tc1 27 78 -4011 4 589 474 182 27 27 chr3LHet 607455 607602 -1947889 - Gypsy11_I LTR Gypsy -266 3258 3112 4 589 1431 197 135 12 chr3LHet 607612 608131 -1947360 - Gypsy11_I LTR Gypsy -523 3001 2579 4 589 261 138 35 0 chr3LHet 608143 608201 -1947290 - TABOR_I LTR Gypsy -1623 4713 4654 4 589 1177 226 66 0 chr3LHet 608249 608567 -1946924 - Gypsy11_I LTR Gypsy -1733 5164 4826 4 589 2442 290 70 17 chr3LHet 608913 610160 -1945331 + Gypsy4_I LTR Gypsy 1864 3191 -2087 4 589 987 313 48 36 chr3LHet 610154 610942 -1944549 + Gypsy4_I LTR Gypsy 3751 4744 -1544 4 589 497 327 38 6 chr3LHet 611127 611544 -1943947 + Gypsy4_I LTR Gypsy 5098 5394 -894 4 589 478 171 9 0 chr3LHet 611639 611744 -1943747 + DNAREP1_DM LINE Penelope 489 594 0 4 589 628 69 58 19 chr3LHet 611924 612027 -1943464 + HMSBEAGLE_I LTR Gypsy 40 146 -6383 4 589 3553 149 26 0 chr3LHet 612046 612628 -1942863 + HMSBEAGLE_I LTR Gypsy 1910 2506 -4023 4 589 9179 169 47 47 chr3LHet 612685 614464 -1941027 + HMSBEAGLE_I LTR Gypsy 2679 4458 -2071 4 589 4805 136 44 0 chr3LHet 614468 615211 -1940280 + HMSBEAGLE_I LTR Gypsy 4758 5533 -996 4 589 47325 8 5 0 chr3LHet 615225 620502 -1934989 - R1_DM LINE R1 -55 5301 1 4 589 227 0 0 0 chr3LHet 620502 620527 -1934964 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2608 4 589 1096 135 54 0 chr3LHet 620526 620711 -1934780 + HMSBEAGLE_I LTR Gypsy 5522 5716 -813 4 589 289 146 11 68 chr3LHet 620714 620802 -1934689 + HMSBEAGLE_I LTR Gypsy 6180 6262 -267 4 589 394 99 141 0 chr3LHet 620801 620872 -1934619 + HMSBEAGLE_I LTR Gypsy 5636 5716 -813 4 589 648 140 5 105 chr3LHet 620875 621066 -1934425 + HMSBEAGLE_I LTR Gypsy 6180 6351 -178 4 589 3176 40 5 3 chr3LHet 621125 621503 -1933988 + STALKER4_LTR LTR Gypsy 1 379 -23 4 589 28 48 0 0 chr3LHet 621641 621683 -1933808 + AT_rich Low_complexity Low_complexity 1 42 0 4 589 36410 75 32 16 chr3LHet 621690 628163 -1927328 + STALKER4_I LTR Gypsy 291 6530 0 4 589 3280 29 5 0 chr3LHet 628163 628540 -1926951 + STALKER4_LTR LTR Gypsy 1 379 -23 4 589 487 366 16 25 chr3LHet 628857 629174 -1926317 + DIVER2_I LTR Pao 2029 2342 -1805 4 589 7795 62 17 0 chr3LHet 629176 630164 -1925327 + BS2 LINE Jockey 3717 4721 0 4 589 265 230 136 11 chr3LHet 630182 630270 -1925221 + DIVER2_I LTR Pao 2333 2431 -1716 4 589 344 357 44 16 chr3LHet 631378 631694 -1923797 + DIVER2_I LTR Pao 2596 2920 -1227 4 589 416 299 156 29 chr3LHet 631871 632109 -1923382 + DIVER2_I LTR Pao 3323 3590 -557 4 589 299 286 9 19 chr3LHet 632237 632344 -1923147 + DIVER2_I LTR Pao 3847 3952 -195 4 589 36 0 0 0 chr3LHet 632679 632715 -1922776 + AT_rich Low_complexity Low_complexity 1 36 0 4 589 183 42 0 0 chr3LHet 633592 633616 -1921875 + (TTATA)n Simple_repeat Simple_repeat 4 27 0 4 589 3188 327 69 42 chr3LHet 634624 637006 -1918485 - Gypsy12_I LTR Gypsy -178 5368 2923 4 589 22 35 0 0 chr3LHet 637638 637667 -1917824 + AT_rich Low_complexity Low_complexity 1 29 0 4 589 741 141 0 16 chr3LHet 638488 638611 -1916880 + DNAREP1_DM LINE Penelope 1 121 -473 4 589 1408 182 58 96 chr3LHet 638650 639027 -1916464 - DM176_LTR LTR Gypsy -14 493 131 4 589 1832 146 18 79 chr3LHet 639405 639748 -1915743 - DMRT1A LINE R1 -71 5112 4791 4 589 676 145 8 31 chr3LHet 639750 639878 -1915613 + STALKER4_I LTR Gypsy 604 728 -5802 4 589 1279 52 93 0 chr3LHet 639859 640031 -1915460 + Baggins1 LINE LOA 196 383 -5070 4 589 3759 40 0 0 chr3LHet 640030 640476 -1915015 + Baggins1 LINE LOA 722 1167 -4286 4 589 3295 47 64 1 chr3LHet 640484 641145 -1914346 + Baggins1 LINE LOA 2399 3130 -2323 4 589 638 95 0 0 chr3LHet 641144 641228 -1914263 + STALKER4_I LTR Gypsy 2003 2086 -4444 4 589 33521 57 36 9 chr3LHet 641235 645738 -1909753 + FW_DM LINE Jockey 1 4793 0 4 589 2194 110 9 0 chr3LHet 645738 646055 -1909436 + STALKER4_I LTR Gypsy 2074 2393 -4137 4 589 7933 98 93 6 chr3LHet 646055 647370 -1908121 + STALKER4_I LTR Gypsy 4763 6216 -380 4 589 23 92 0 0 chr3LHet 647370 647435 -1908056 + AT_rich Low_complexity Low_complexity 1 65 0 4 589 307 274 27 0 chr3LHet 647517 647590 -1907901 + (CGG)n Simple_repeat Simple_repeat 3 77 0 4 589 1719 116 99 0 chr3LHet 648771 649063 -1906428 + MAX_LTR LTR Pao 1 321 0 4 589 2245 31 3 94 chr3LHet 649063 649383 -1906108 + MAX_I LTR Pao 1 291 -7623 4 589 189 0 0 0 chr3LHet 649781 649802 -1905689 + (A)n Simple_repeat Simple_repeat 1 21 0 4 589 252 322 0 0 chr3LHet 652244 652334 -1903157 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 4 589 296 358 44 0 chr3LHet 652657 652861 -1902630 + Invader3_I LTR Gypsy 3981 4193 -695 4 589 613 147 167 69 chr3LHet 653612 653742 -1901749 + MAX_I LTR Pao 282 434 -7480 4 589 4995 7 35 0 chr3LHet 653742 654316 -1901175 + IDEFIX_LTR LTR Gypsy 1 594 0 4 589 25 0 0 0 chr3LHet 654505 654530 -1900961 + AT_rich Low_complexity Low_complexity 1 25 0 4 73 49735 9 0 1 chr3LHet 654911 660546 -1894945 + IDEFIX_I LTR Gypsy 1 5628 0 4 590 5270 8 3 0 chr3LHet 660546 661138 -1894353 + IDEFIX_LTR LTR Gypsy 1 594 0 4 590 252 183 9 80 chr3LHet 661138 661251 -1894240 + MAX_I LTR Pao 463 567 -7347 4 590 3214 6 0 0 chr3LHet 661257 661603 -1893888 + Invader4_LTR LTR Gypsy 1 346 0 4 590 19917 59 54 76 chr3LHet 661834 664903 -1890588 + MAX_I LTR Pao 557 3560 -4354 4 590 12355 30 4 22 chr3LHet 664901 666424 -1889067 + MAX_I LTR Pao 6418 7912 -2 4 590 1396 45 0 6 chr3LHet 666429 666602 -1888889 + MAX_LTR LTR Pao 1 172 -149 4 590 2468 0 0 0 chr3LHet 666602 666878 -1888613 + Copia_LTR LTR Copia 1 276 0 4 590 39264 1 0 0 chr3LHet 666878 671472 -1884019 + Copia_I LTR Copia 1 4593 0 4 590 2297 0 0 0 chr3LHet 671472 671748 -1883743 + Copia_LTR LTR Copia 1 276 0 4 590 21 0 0 0 chr3LHet 672013 672034 -1883457 + AT_rich Low_complexity Low_complexity 1 21 0 4 590 29 0 0 0 chr3LHet 672485 672514 -1882977 + AT_rich Low_complexity Low_complexity 1 29 0 4 590 1516 292 92 12 chr3LHet 672516 673504 -1881987 - HMSBEAGLE_I LTR Gypsy -757 5772 4707 4 590 3389 299 43 4 chr3LHet 673577 674939 -1880552 - HMSBEAGLE_I LTR Gypsy -1935 4594 3179 4 590 506 307 35 41 chr3LHet 675146 675462 -1880029 - HMSBEAGLE_I LTR Gypsy -3601 2928 2615 4 590 8402 37 14 0 chr3LHet 675602 676692 -1878799 + PROTOP_A DNA P 1 1105 0 4 590 549 340 4 4 chr3LHet 676839 677119 -1878372 - HMSBEAGLE_I LTR Gypsy -4741 1788 1509 4 590 2023 43 0 0 chr3LHet 677798 678056 -1877435 - DMCR1A LINE CR1 -10 4460 4203 4 590 1367 42 12 32 chr3LHet 678068 678280 -1877211 - BATUMI_LTR LTR Pao -57 215 35 4 590 4770 65 0 5 chr3LHet 678280 678944 -1876547 - BATUMI_I LTR Pao 0 7963 7303 4 590 2347 43 9 9 chr3LHet 678967 679292 -1876199 + BATUMI_I LTR Pao 6427 6751 -1212 4 590 24814 38 12 46 chr3LHet 679285 682880 -1872611 - BATUMI_I LTR Pao -4489 3474 1 4 590 1708 46 4 40 chr3LHet 682880 683130 -1872361 - BATUMI_LTR LTR Pao 0 272 32 4 590 15499 30 10 1 chr3LHet 683151 685071 -1870420 - DMCR1A LINE CR1 -262 4208 2270 4 590 279 172 154 81 chr3LHet 685261 685507 -1869984 + STALKER4_I LTR Gypsy 6217 6480 -50 4 590 493 114 0 136 chr3LHet 685540 685672 -1869819 + STALKER4_LTR LTR Gypsy 1 114 -288 4 590 712 89 55 39 chr3LHet 685687 685815 -1869676 + STALKER4_LTR LTR Gypsy 233 362 -40 4 590 1624 290 48 7 chr3LHet 686397 687297 -1868194 - QUASIMODO_I LTR Gypsy 0 6060 5124 4 590 434 225 113 0 chr3LHet 688817 688968 -1866523 - TV1I LTR Gypsy -1072 4891 4724 4 590 4513 262 65 16 chr3LHet 689072 690933 -1864558 - TV1I LTR Gypsy -1471 4492 2541 4 590 876 261 4 4 chr3LHet 690932 691204 -1864287 - TV1I LTR Gypsy -3824 1804 1543 4 590 561 290 87 24 chr3LHet 691218 691713 -1863778 - QUASIMODO_I LTR Gypsy -4331 1729 1204 4 590 27 29 0 0 chr3LHet 692494 692528 -1862963 + AT_rich Low_complexity Low_complexity 1 34 0 4 590 541 307 42 27 chr3LHet 693076 693247 -1862244 + Gypsy4_I LTR Gypsy 2480 2768 -3520 4 590 1006 119 33 0 chr3LHet 693247 693457 -1862034 + TLD2 Unknown Unknown 2 218 0 4 590 5003 40 3 2 chr3LHet 694293 694927 -1860564 - DMCR1A LINE CR1 -3361 1109 475 4 590 598 53 97 0 chr3LHet 694936 695049 -1860442 - PROTOP_B DNA P -479 674 551 4 590 54 16 0 0 chr3LHet 695845 695906 -1859585 + AT_rich Low_complexity Low_complexity 1 61 0 4 590 2492 69 60 0 chr3LHet 700332 700696 -1854795 - ROOA_LTR LTR Pao 0 386 1 4 590 467 157 9 0 chr3LHet 701306 701414 -1854077 + TART LINE telomeric 2973 3081 -11396 4 590 619 234 15 81 chr3LHet 701442 701725 -1853766 + TART LINE telomeric 7806 8046 -2608 4 590 849 183 12 52 chr3LHet 701705 701999 -1853492 + TART LINE telomeric 5700 5874 -8603 4 590 2096 184 142 62 chr3LHet 702004 702871 -1852620 + TART LINE telomeric 12546 13481 -996 4 590 847 193 184 49 chr3LHet 702886 703311 -1852180 + TART LINE telomeric 13992 14473 -4 4 590 1396 139 71 47 chr3LHet 703299 703639 -1851852 + TAHRE LINE telomeric 284 631 -9832 4 590 743 340 66 28 chr3LHet 703957 704659 -1850832 + MICROPIA_I LTR Gypsy 1 710 -3389 4 590 2492 69 60 0 chr3LHet 707393 707757 -1847734 - ROOA_LTR LTR Pao 0 386 1 4 590 467 157 9 0 chr3LHet 708367 708475 -1847016 + TART LINE telomeric 2973 3081 -11396 4 590 619 234 15 81 chr3LHet 708503 708786 -1846705 + TART LINE telomeric 7806 8046 -2608 4 590 849 185 23 52 chr3LHet 708766 709078 -1846413 + TART LINE telomeric 5700 5874 -8603 4 590 2633 187 142 62 chr3LHet 709065 709932 -1845559 + TART LINE telomeric 12546 13481 -996 4 590 847 193 184 49 chr3LHet 709947 710372 -1845119 + TART LINE telomeric 13992 14473 -4 4 590 1396 139 71 47 chr3LHet 710360 710700 -1844791 + TAHRE LINE telomeric 284 631 -9832 4 590 231 276 12 132 chr3LHet 710745 710912 -1844579 + ACCORD2_I LTR Gypsy 526 672 -6540 4 590 6359 321 40 32 chr3LHet 711019 714862 -1840629 + MICROPIA_I LTR Gypsy 1 3850 -626 4 590 2283 193 89 29 chr3LHet 715428 716024 -1839467 + TAHRE LINE telomeric 778 1409 -9054 4 590 32 43 0 0 chr3LHet 716093 716139 -1839352 + AT_rich Low_complexity Low_complexity 1 46 0 4 590 29 28 0 0 chr3LHet 717263 717299 -1838192 + AT_rich Low_complexity Low_complexity 1 36 0 4 590 1014 129 0 6 chr3LHet 717408 717580 -1837911 + Gypsy12_I LTR Gypsy 1353 1523 -4023 4 590 7445 177 103 80 chr3LHet 717577 720203 -1835288 + Gypsy8_I LTR Gypsy 300 2984 -1363 4 590 3264 194 74 5 chr3LHet 720361 721101 -1834390 + Gypsy12_I LTR Gypsy 1644 2434 -3112 4 590 5951 169 111 11 chr3LHet 721101 722328 -1833163 + Gypsy12_I LTR Gypsy 4197 5546 0 4 590 30 0 0 0 chr3LHet 722382 722412 -1833079 + AT_rich Low_complexity Low_complexity 1 30 0 4 590 29 47 0 0 chr3LHet 722720 722763 -1832728 + AT_rich Low_complexity Low_complexity 1 43 0 4 590 1335 57 268 5 chr3LHet 723441 723831 -1831660 - DM297_I LTR Gypsy -1784 4383 3892 4 590 5393 115 38 63 chr3LHet 723847 724955 -1830536 + Gypsy12A_LTR LTR Gypsy 1 1080 -1200 4 590 4164 81 58 43 chr3LHet 725015 725752 -1829739 + Gypsy12A_LTR LTR Gypsy 1523 2270 -10 4 590 3421 119 145 9 chr3LHet 725760 726515 -1828976 - DM297_I LTR Gypsy -2542 3625 2768 4 590 1471 183 10 0 chr3LHet 726511 726823 -1828668 - DM297_I LTR Gypsy -3930 2237 1923 4 590 911 166 11 16 chr3LHet 726823 727013 -1828478 - Invader2_LTR LTR Gypsy 0 266 78 4 590 1260 168 46 0 chr3LHet 727035 727297 -1828194 - DM297_I LTR Gypsy -4347 1820 1547 4 590 712 152 0 7 chr3LHet 727323 727469 -1828022 - DM297_I LTR Gypsy -5111 1056 912 4 590 1758 145 38 14 chr3LHet 727462 728075 -1827416 - DM297_I LTR Gypsy -5459 708 1 4 590 1838 134 63 61 chr3LHet 728076 728488 -1827003 - DM297_LTR LTR Gypsy -1 413 1 4 590 1683 115 77 29 chr3LHet 728496 728846 -1826645 - ROVER-LTR_DM LTR Gypsy 0 367 1 4 590 250 138 653 0 chr3LHet 728849 728962 -1826529 + DNAREP1_DM LINE Penelope 17 201 -393 4 590 37 62 0 0 chr3LHet 729188 729253 -1826238 + AT_rich Low_complexity Low_complexity 1 65 0 4 590 301 122 35 46 chr3LHet 729462 729550 -1825941 + DNAREP1_DM LINE Penelope 224 301 -293 4 590 2822 103 121 2 chr3LHet 729582 730087 -1825404 + DNAREP1_DM LINE Penelope 1 565 -29 4 590 1443 147 110 3 chr3LHet 730126 730454 -1825037 - DM297_I LTR Gypsy -4640 1527 1165 4 590 1920 123 3 50 chr3LHet 730464 730823 -1824668 - DM297_I LTR Gypsy -5482 685 344 4 590 192 60 106 24 chr3LHet 731109 731194 -1824297 + (TATAA)n Simple_repeat Simple_repeat 2 93 0 4 590 1714 62 17 31 chr3LHet 731197 731482 -1824009 - BATUMI_LTR LTR Pao 0 272 32 4 590 30987 117 13 31 chr3LHet 731540 739466 -1816025 - BATUMI_I LTR Pao -78 7836 1 4 590 1704 58 0 28 chr3LHet 739466 739714 -1815777 - BATUMI_LTR LTR Pao 0 272 32 4 590 42 36 0 0 chr3LHet 739735 739791 -1815700 + AT_rich Low_complexity Low_complexity 1 56 0 4 590 57 39 0 0 chr3LHet 740048 740126 -1815365 + AT_rich Low_complexity Low_complexity 1 78 0 4 590 29 0 0 0 chr3LHet 740919 740948 -1814543 + AT_rich Low_complexity Low_complexity 1 29 0 4 590 723 129 55 12 chr3LHet 740974 741147 -1814344 - DNAREP1_DM LINE Penelope -262 332 89 4 590 563 83 320 0 chr3LHet 741135 741260 -1814231 - DNAREP1_DM LINE Penelope -429 165 1 4 590 22 0 0 0 chr3LHet 741398 741420 -1814071 + AT_rich Low_complexity Low_complexity 1 22 0 4 590 264 136 0 0 chr3LHet 741962 742006 -1813485 + Copia_I LTR Copia 3169 3212 -1381 4 590 1557 102 36 40 chr3LHet 742023 742299 -1813192 + BURDOCK_LTR LTR Gypsy 1 275 0 4 590 35089 61 27 19 chr3LHet 742299 747917 -1807574 + BURDOCK_I LTR Gypsy 1 5860 0 4 590 1623 98 32 40 chr3LHet 747918 748195 -1807296 + BURDOCK_LTR LTR Gypsy 1 275 0 4 590 461 197 164 0 chr3LHet 748210 748332 -1807159 + Copia_I LTR Copia 3229 3370 -1223 4 590 318 253 0 0 chr3LHet 748701 748796 -1806695 + Copia_I LTR Copia 3377 3471 -1122 4 590 465 336 40 0 chr3LHet 749222 749472 -1806019 - Gypsy12_I LTR Gypsy -2139 3407 3148 4 590 12469 45 22 1 chr3LHet 749969 751584 -1803907 + DMCR1A LINE CR1 837 2485 -1985 4 590 14082 30 60 4 chr3LHet 751601 753432 -1802059 + DMCR1A LINE CR1 2537 4470 0 4 590 341 247 40 35 chr3LHet 753732 753913 -1801578 + Gypsy3_LTR LTR Gypsy 21 201 -206 4 590 25 0 0 0 chr3LHet 754276 754301 -1801190 + AT_rich Low_complexity Low_complexity 1 25 0 4 590 2391 232 149 34 chr3LHet 754408 756029 -1799462 + Gypsy3_I LTR Gypsy 330 2137 -4040 4 590 28 79 0 0 chr3LHet 756460 756523 -1798968 + AT_rich Low_complexity Low_complexity 1 63 0 4 590 254 119 0 0 chr3LHet 756766 756808 -1798683 - PROTOP_B DNA P 0 1153 1112 4 590 1953 17 0 0 chr3LHet 756791 757022 -1798469 - PROTOP_B DNA P -922 231 1 4 590 24 53 0 0 chr3LHet 757047 757085 -1798406 + AT_rich Low_complexity Low_complexity 1 38 0 4 590 1839 87 89 18 chr3LHet 757291 757618 -1797873 + DNAREP1_DM LINE Penelope 50 399 -195 4 590 12774 86 30 3 chr3LHet 758080 760015 -1795476 + STALKER4_I LTR Gypsy 4155 6142 -388 4 590 4345 27 26 19 chr3LHet 760015 760583 -1794908 + PROTOP_A DNA P 1 572 -533 4 590 517 62 42 0 chr3LHet 760580 760676 -1794815 + PROTOP DNA P 648 747 -3733 4 590 2216 23 0 0 chr3LHet 760691 760957 -1794534 - Invader2_LTR LTR Gypsy 0 266 1 4 590 3907 34 0 2 chr3LHet 760957 761456 -1794035 + PROTOP_A DNA P 608 1105 0 4 590 1046 115 93 93 chr3LHet 761456 761800 -1793691 + STALKER4_I LTR Gypsy 6132 6475 -55 4 590 10627 36 5 5 chr3LHet 761840 763183 -1792308 - G5A_DM LINE Jockey -3 2838 1496 4 590 1025 184 20 53 chr3LHet 763183 763482 -1792009 + Gypsy5_LTR LTR Gypsy 1 289 -141 4 590 24 32 0 0 chr3LHet 763515 763546 -1791945 + AT_rich Low_complexity Low_complexity 1 31 0 4 590 336 77 19 37 chr3LHet 763624 763678 -1791813 + Gypsy5_I LTR Gypsy 1 53 -6456 4 590 1091 181 80 10 chr3LHet 764712 765014 -1790477 + Gypsy5_I LTR Gypsy 99 421 -6088 4 590 22338 158 16 3 chr3LHet 765007 769082 -1786409 + Gypsy5_I LTR Gypsy 2371 6499 -10 4 590 9113 124 46 9 chr3LHet 769080 770921 -1784570 - G5A_DM LINE Jockey -1987 2869 1 4 590 845 234 5 5 chr3LHet 770921 771123 -1784368 - G5A_DM LINE Jockey -3536 1320 1119 4 590 788 311 43 14 chr3LHet 771293 771711 -1783780 - G5A_DM LINE Jockey -4019 837 408 4 590 1184 81 6 0 chr3LHet 771815 771989 -1783502 + STALKER4_LTR LTR Gypsy 1 175 -227 4 590 14913 155 6 9 chr3LHet 772587 777029 -1778462 - G6_DM LINE Jockey 0 4346 3 4 590 6261 314 48 46 chr3LHet 778563 782476 -1773015 - HMSBEAGLE_I LTR Gypsy -757 5772 1852 4 590 21 0 0 0 chr3LHet 783065 783086 -1772405 + AT_rich Low_complexity Low_complexity 1 21 0 4 590 468 220 70 85 chr3LHet 783153 783352 -1772139 - HMSBEAGLE_I LTR Gypsy -6110 419 224 4 590 3051 205 4 26 chr3LHet 783882 784582 -1770909 + DM297_I LTR Gypsy 651 1335 -4832 4 590 637 153 0 8 chr3LHet 784581 784700 -1770791 + DM297_I LTR Gypsy 1703 1820 -4347 4 590 534 114 0 175 chr3LHet 784740 784900 -1770591 + DM297_I LTR Gypsy 2057 2188 -3979 4 590 2614 26 0 0 chr3LHet 784900 785206 -1770285 - DM1731_LTR LTR Copia 0 336 31 4 590 1913 5 0 22 chr3LHet 785208 785433 -1770058 - DM1731_I LTR Copia 0 3976 3757 4 590 3603 17 0 0 chr3LHet 785427 785835 -1769656 - DM1731_I LTR Copia -1206 2770 2363 4 590 796 86 0 0 chr3LHet 785826 785931 -1769560 - DM1731_I LTR Copia -2195 1781 1677 4 73 6142 12 0 0 chr3LHet 785929 786621 -1768870 - DM1731_I LTR Copia -3284 692 1 4 591 2749 16 0 0 chr3LHet 786621 786933 -1768558 - DM1731_LTR LTR Copia 0 336 25 4 591 640 108 59 0 chr3LHet 786928 787030 -1768461 + DM297_I LTR Gypsy 2183 2290 -3877 4 591 763 87 9 0 chr3LHet 787031 787146 -1768345 + BS3_DM LINE Jockey 1617 1732 -58 4 591 2273 154 159 6 chr3LHet 787168 787652 -1767839 + DM297_I LTR Gypsy 2308 2865 -3302 4 591 446 266 0 0 chr3LHet 787656 787769 -1767722 + DM297_I LTR Gypsy 3055 3167 -3000 4 591 1291 137 14 0 chr3LHet 787783 787995 -1767496 + DM297_I LTR Gypsy 3256 3470 -2697 4 591 651 339 51 48 chr3LHet 787987 788916 -1766575 + MICROPIA_I LTR Gypsy 2346 3276 -1200 4 591 434 149 118 10 chr3LHet 790008 790110 -1765381 + DNAREP1_DM LINE Penelope 220 332 -262 4 591 238 189 0 54 chr3LHet 790129 790185 -1765306 - DNAREP1_DM LINE Penelope -154 440 388 4 591 247 112 268 87 chr3LHet 790164 790291 -1765200 - DNAREP1_DM LINE Penelope -21 573 424 4 591 3236 52 76 3 chr3LHet 790331 791186 -1764305 + PROTOP_B DNA P 1 917 -236 4 591 625 73 0 0 chr3LHet 791183 791265 -1764226 + PROTOP_B DNA P 1072 1153 0 4 591 397 316 170 15 chr3LHet 791340 791681 -1763810 + HMSBEAGLE_I LTR Gypsy 3890 4283 -2246 4 591 472 238 40 20 chr3LHet 791698 791848 -1763643 + HMSBEAGLE_I LTR Gypsy 4343 4495 -2034 4 591 22 56 0 0 chr3LHet 791887 791923 -1763568 + AT_rich Low_complexity Low_complexity 1 36 0 4 591 2141 26 0 11 chr3LHet 791949 792225 -1763266 + DMCR1A LINE CR1 1 273 -4197 4 591 16543 36 38 1 chr3LHet 792235 794266 -1761225 + DMCR1A LINE CR1 381 2485 -1985 4 591 6844 27 9 0 chr3LHet 794283 795093 -1760398 + DMCR1A LINE CR1 2537 3353 -1117 4 591 281 197 0 62 chr3LHet 795071 795136 -1760355 - DMCR1A LINE CR1 -1457 3013 2953 4 591 1210 141 60 18 chr3LHet 795134 795351 -1760140 - DMCR1A LINE CR1 -1909 2561 2336 4 591 976 136 268 24 chr3LHet 795353 795669 -1759822 - DNAREP1_DM LINE Penelope -288 306 2 4 591 337 80 120 0 chr3LHet 795757 795807 -1759684 - DNAREP1_DM LINE Penelope -537 57 2 4 591 22 35 0 0 chr3LHet 795859 795888 -1759603 + AT_rich Low_complexity Low_complexity 1 29 0 4 591 4110 70 44 0 chr3LHet 795954 796524 -1758967 + DOC3_DM LINE Jockey 136 730 -4010 4 591 1246 28 0 0 chr3LHet 796542 796687 -1758804 + DOC3_DM LINE Jockey 956 1100 -3640 4 591 508 91 0 0 chr3LHet 796691 796768 -1758723 + DOC3_DM LINE Jockey 1324 1400 -3340 4 591 2150 146 61 54 chr3LHet 796775 797367 -1758124 + STALKER4_I LTR Gypsy 2179 2898 -3632 4 591 634 71 0 0 chr3LHet 797360 797445 -1758046 + STALKER4_I LTR Gypsy 3091 3175 -3355 4 591 3351 98 33 2 chr3LHet 797441 797962 -1757529 + Stalker2_I LTR Gypsy 3515 4051 -3351 4 591 39543 16 21 1 chr3LHet 797977 802577 -1752914 + FW_DM LINE Jockey 1 4691 -1 4 591 9660 71 80 7 chr3LHet 802576 804717 -1750774 + STALKER4_I LTR Gypsy 2832 5990 -540 4 591 548 132 12 85 chr3LHet 804719 804884 -1750607 + STALKER4_I LTR Gypsy 3372 3524 0 4 591 2406 85 161 8 chr3LHet 804884 805276 -1750215 + Gypsy11_LTR LTR Gypsy 1 452 0 4 591 11133 30 26 1 chr3LHet 805276 806619 -1748872 + DOC3_DM LINE Jockey 2205 3581 -1159 4 591 2802 26 12 0 chr3LHet 806624 806965 -1748526 + DOC3_DM LINE Jockey 4394 4738 -2 4 591 674 281 50 25 chr3LHet 806969 807210 -1748281 - DIVER2_I LTR Pao -497 3650 3404 4 591 49 0 0 0 chr3LHet 807246 807295 -1748196 + AT_rich Low_complexity Low_complexity 1 49 0 4 591 824 87 87 0 chr3LHet 808911 809038 -1746453 - Baggins1 LINE LOA -83 5370 5233 4 591 35 0 0 0 chr3LHet 809679 809714 -1745777 + AT_rich Low_complexity Low_complexity 1 35 0 4 591 1180 122 19 0 chr3LHet 809744 809957 -1745534 - TLD2 Unknown Unknown 0 218 2 4 591 528 306 37 37 chr3LHet 809798 810097 -1745394 - Gypsy4_I LTR Gypsy -3510 2778 2480 4 591 1219 281 83 7 chr3LHet 810213 810672 -1744819 - FROGGER_I LTR Copia -957 1120 627 4 591 1111 199 25 14 chr3LHet 811818 812093 -1743398 + DNAREP1_DM LINE Penelope 1 278 -316 4 591 777 173 123 20 chr3LHet 812097 812292 -1743199 + DNAREP1_DM LINE Penelope 203 417 -177 4 591 32834 17 9 1 chr3LHet 812362 816173 -1739318 - FW_DM LINE Jockey -2 4690 848 4 591 2973 34 31 0 chr3LHet 816172 816530 -1738961 - FW_DM LINE Jockey -4323 369 1 4 591 458 219 70 9 chr3LHet 816808 816923 -1738568 - DIVER2_I LTR Pao -5 4142 4021 4 591 361 0 0 39 chr3LHet 817152 817203 -1738288 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 591 25 31 0 0 chr3LHet 819181 819213 -1736278 + AT_rich Low_complexity Low_complexity 1 32 0 4 591 1173 314 4 9 chr3LHet 819280 819737 -1735754 - Gypsy4_I LTR Gypsy -5157 1131 677 4 591 924 273 18 39 chr3LHet 820936 821363 -1734128 - TV1I LTR Gypsy -1940 4227 3649 4 591 644 283 96 40 chr3LHet 821480 821959 -1733532 - TV1I LTR Gypsy -2595 3368 2863 4 591 449 258 3 35 chr3LHet 822002 822146 -1733345 - TV1I LTR Gypsy -3659 2304 2177 4 591 264 313 51 34 chr3LHet 822151 822408 -1733083 - QUASIMODO_I LTR Gypsy -3973 2087 1905 4 591 1951 57 172 16 chr3LHet 823107 823528 -1731963 + PROTOP_B DNA P 183 669 -484 4 591 17273 38 23 1 chr3LHet 823537 825639 -1729852 + DMCR1A LINE CR1 474 2620 -1850 4 591 31 26 0 0 chr3LHet 825890 825928 -1729563 + AT_rich Low_complexity Low_complexity 1 38 0 4 591 1683 79 122 15 chr3LHet 825998 826268 -1729223 - DNAREP1_DM LINE Penelope 0 594 296 4 591 656 113 203 14 chr3LHet 826442 826585 -1728906 + DNAREP1_DM LINE Penelope 185 354 -240 4 591 568 334 77 7 chr3LHet 826586 826884 -1728607 - DM1731_I LTR Copia -2131 1845 1527 4 591 329 311 10 0 chr3LHet 827185 827288 -1728203 - DM1731_I LTR Copia -3026 950 847 4 591 34 24 0 0 chr3LHet 827323 827364 -1728127 + AT_rich Low_complexity Low_complexity 1 41 0 4 591 320 263 50 50 chr3LHet 827513 827613 -1727878 - DM1731_I LTR Copia -3388 588 489 4 591 4164 56 66 26 chr3LHet 827708 828316 -1727175 - DOC5_DM LINE Jockey -875 3807 3176 4 591 32 43 0 0 chr3LHet 829774 829820 -1725671 + AT_rich Low_complexity Low_complexity 1 46 0 4 591 390 368 0 0 chr3LHet 831533 831699 -1723792 - HMSBEAGLE_I LTR Gypsy -2989 3540 3375 4 591 373 215 21 0 chr3LHet 831718 831811 -1723680 - HMSBEAGLE_I LTR Gypsy -3205 3324 3230 4 591 13781 48 100 1 chr3LHet 832290 835401 -1720090 + Baggins1 LINE LOA 1 3536 -1917 4 591 6523 51 116 6 chr3LHet 835398 836278 -1719213 + Baggins1 LINE LOA 4158 5134 -319 4 591 410 279 253 9 chr3LHet 836326 836556 -1718935 - HMSBEAGLE_I LTR Gypsy -4576 1953 1668 4 591 2352 132 104 49 chr3LHet 836614 837355 -1718136 - DNAREP1_DM LINE Penelope -31 563 1 4 591 300 298 16 16 chr3LHet 838443 838569 -1716922 - Ulysses_I LTR Gypsy -1747 4634 4509 4 591 18006 36 20 4 chr3LHet 841286 843421 -1712070 + DMCR1A LINE CR1 728 2896 -1574 4 591 2548 73 142 5 chr3LHet 843427 844055 -1711436 + DMCR1A LINE CR1 3495 4208 -262 4 591 1494 96 4 62 chr3LHet 844076 844332 -1711159 + BATUMI_LTR LTR Pao 32 272 0 4 591 5482 58 81 94 chr3LHet 844334 845390 -1710101 + BATUMI_I LTR Pao 1 1043 -6920 4 591 38531 89 39 42 chr3LHet 845388 851681 -1703810 + BATUMI_I LTR Pao 1365 7836 -78 4 591 1825 68 17 31 chr3LHet 851739 852024 -1703467 + BATUMI_LTR LTR Pao 32 272 0 4 591 192 60 106 24 chr3LHet 852027 852112 -1703379 + (TTATA)n Simple_repeat Simple_repeat 2 93 0 4 591 240 83 0 53 chr3LHet 852120 852158 -1703333 - DNAREP1_DM LINE Penelope -4 590 555 4 591 2114 123 18 49 chr3LHet 852298 852683 -1702808 + DM297_I LTR Gypsy 315 687 -5480 4 591 1559 150 110 3 chr3LHet 852691 853019 -1702472 + DM297_I LTR Gypsy 1165 1527 -4640 4 591 3035 103 121 2 chr3LHet 853058 853563 -1701928 - DNAREP1_DM LINE Penelope -29 565 1 4 591 323 139 11 102 chr3LHet 853595 853683 -1701808 - DNAREP1_DM LINE Penelope -293 301 224 4 591 57 39 0 0 chr3LHet 853887 853965 -1701526 + AT_rich Low_complexity Low_complexity 1 78 0 4 591 3120 0 0 0 chr3LHet 854127 854463 -1701028 + DM1731_LTR LTR Copia 1 336 0 4 591 36930 1 1 1 chr3LHet 854463 858441 -1697050 + DM1731_I LTR Copia 1 3976 0 4 591 2866 39 0 0 chr3LHet 858441 858777 -1696714 + DM1731_LTR LTR Copia 1 336 0 4 591 40 37 0 0 chr3LHet 858840 858894 -1696597 + AT_rich Low_complexity Low_complexity 1 54 0 4 591 1768 39 42 25 chr3LHet 858917 859154 -1696337 + BATUMI_LTR LTR Pao 32 272 0 4 591 6609 45 39 73 chr3LHet 859154 860234 -1695257 + BATUMI_I LTR Pao 1 1043 -6920 4 591 27740 40 45 56 chr3LHet 860232 864023 -1691468 + BATUMI_I LTR Pao 1365 5115 -2848 4 591 6927 43 34 9 chr3LHet 864017 864863 -1690628 + BATUMI_I LTR Pao 5392 6258 -1705 4 591 268 81 0 0 chr3LHet 864862 864899 -1690592 + BATUMI_I LTR Pao 6387 6423 -1540 4 591 4586 44 7 9 chr3LHet 864922 865498 -1689993 - BATUMI_I LTR Pao -962 7001 6427 4 591 1816 90 10 9 chr3LHet 865521 866020 -1689471 + BATUMI_I LTR Pao 7303 7963 0 4 591 1602 75 4 62 chr3LHet 866042 866298 -1689193 + BATUMI_LTR LTR Pao 32 272 0 4 591 2245 34 4 0 chr3LHet 866298 866565 -1688926 + DMCR1A LINE CR1 4203 4470 0 4 591 1145 70 0 0 chr3LHet 866998 867154 -1688337 + FW2_DM LINE Jockey 1 156 -3805 4 591 4391 52 48 0 chr3LHet 867156 867717 -1687774 + FW2_DM LINE Jockey 384 971 -2990 4 591 6633 78 129 53 chr3LHet 867696 868828 -1686663 + FW2_DM LINE Jockey 1328 2545 -1416 4 591 4049 42 4 0 chr3LHet 868837 869316 -1686175 + FW2_DM LINE Jockey 2807 3287 -674 4 591 247 50 175 0 chr3LHet 869326 869366 -1686125 + FW2_DM LINE Jockey 3761 3807 -154 4 591 615 331 30 22 chr3LHet 869441 869808 -1685683 - DIVER2_I LTR Pao -1758 2389 2020 4 591 351 238 46 28 chr3LHet 869838 869946 -1685545 - DIVER2_I LTR Pao -2334 1813 1704 4 591 357 229 46 28 chr3LHet 870277 870385 -1685106 + DIVER2_I LTR Pao 1704 1813 -2334 4 591 569 336 62 14 chr3LHet 870415 870768 -1684723 + DIVER2_I LTR Pao 2020 2389 -1758 4 591 269 302 28 19 chr3LHet 871747 871855 -1683636 + DIVER2_I LTR Pao 2390 2498 -1649 4 591 1499 340 95 15 chr3LHet 872241 873329 -1682162 + DIVER2_I LTR Pao 2867 4041 -106 4 591 29 28 0 0 chr3LHet 874355 874391 -1681100 + AT_rich Low_complexity Low_complexity 1 36 0 4 591 810 202 153 12 chr3LHet 874697 874938 -1680553 - MDG1_I LTR Gypsy -4090 2506 2232 4 591 227 259 56 0 chr3LHet 876705 876759 -1678732 + Gypsy12_I LTR Gypsy 3273 3329 -2217 4 591 638 26 13 0 chr3LHet 877051 877128 -1678363 - TRANSIB2 DNA Transib -2328 516 439 4 591 1708 24 14 0 chr3LHet 877126 877334 -1678157 - TRANSIB2 DNA Transib -2594 250 40 4 591 4039 45 51 2 chr3LHet 877333 877846 -1677645 - DMCR1A LINE CR1 0 4470 3933 4 591 43591 1 0 0 chr3LHet 877844 882568 -1672923 + DOC LINE Jockey 3 4725 0 4 591 1059 40 0 0 chr3LHet 882570 882695 -1672796 - DMCR1A LINE CR1 -523 3947 3823 4 591 14426 28 44 2 chr3LHet 882692 884469 -1671022 - DMCR1A LINE CR1 -2619 1851 1 4 591 309 24 0 67 chr3LHet 884478 884523 -1670968 - TRANSIB2 DNA Transib -2800 44 3 4 591 37 23 0 0 chr3LHet 885859 885903 -1669588 + AT_rich Low_complexity Low_complexity 1 44 0 4 591 318 161 0 0 chr3LHet 885935 885991 -1669500 - MDG1_I LTR Gypsy -4496 2100 2045 4 591 2030 106 127 3 chr3LHet 886059 886390 -1669101 - DNAREP1_DM LINE Penelope -21 573 202 4 591 2070 47 0 4 chr3LHet 886986 887240 -1668251 + PROTOP DNA P 1317 1569 -2911 4 591 3647 53 41 11 chr3LHet 887237 887921 -1667570 + PROTOP DNA P 1717 2468 -2012 4 591 893 206 136 29 chr3LHet 888192 888502 -1666989 - Gypsy3_LTR LTR Gypsy -25 373 31 4 591 9340 204 70 52 chr3LHet 888488 891528 -1663963 - Gypsy3_I LTR Gypsy -817 6195 3739 4 591 10247 159 29 54 chr3LHet 891548 893716 -1661775 - Gypsy3_I LTR Gypsy -3882 2295 254 4 591 1195 78 90 40 chr3LHet 893734 893934 -1661557 + DNAREP1_DM LINE Penelope 364 573 -21 4 591 374 301 0 0 chr3LHet 894218 894321 -1661170 + OSVALDO_I LTR Gypsy 508 610 -6043 4 591 269 301 26 17 chr3LHet 895062 895177 -1660314 + OSVALDO_I LTR Gypsy 2105 2220 -4433 4 591 186 71 0 0 chr3LHet 896361 896389 -1659102 + (GAA)n Simple_repeat Simple_repeat 3 30 0 4 591 46 0 0 0 chr3LHet 898540 898586 -1656905 + AT_rich Low_complexity Low_complexity 1 46 0 4 591 368 293 34 34 chr3LHet 899399 899634 -1655857 + BURDOCK_I LTR Gypsy 850 992 -4868 4 591 30 45 0 0 chr3LHet 900426 900470 -1655021 + AT_rich Low_complexity Low_complexity 1 44 0 4 591 308 307 0 0 chr3LHet 901319 901420 -1654071 + Gypsy_DS LTR Gypsy 3235 3335 -4187 4 591 1283 35 79 0 chr3LHet 901351 901553 -1653938 + TLD2 Unknown Unknown 1 218 0 4 591 382 271 70 32 chr3LHet 901388 901700 -1653791 + DM297_I LTR Gypsy 2668 2991 -3176 4 591 509 335 25 11 chr3LHet 901826 902107 -1653384 + GTWIN_I LTR Gypsy 3254 3538 -2883 4 591 25 0 0 0 chr3LHet 903421 903446 -1652045 + AT_rich Low_complexity Low_complexity 1 25 0 4 591 47 0 0 0 chr3LHet 905268 905315 -1650176 + AT_rich Low_complexity Low_complexity 1 47 0 4 591 292 360 33 32 chr3LHet 905544 906264 -1649227 + Invader3_I LTR Gypsy 2309 3029 -1859 4 591 327 328 16 10 chr3LHet 907019 907213 -1648278 + BLASTOPIA_I LTR Gypsy 3541 3735 -746 4 591 213 39 0 0 chr3LHet 908263 908289 -1647202 + (CAAAT)n Simple_repeat Simple_repeat 3 28 0 4 591 4681 57 170 3 chr3LHet 908298 909237 -1646254 + DMCR1A LINE CR1 3375 4470 0 4 591 852 200 28 32 chr3LHet 910250 910498 -1644993 + DM412 LTR Gypsy 5728 5974 -923 4 591 427 173 246 21 chr3LHet 910475 910617 -1644874 + DM412 LTR Gypsy 6121 6294 -603 4 591 2761 114 122 15 chr3LHet 910625 911159 -1644332 + DNAREP1_DM LINE Penelope 1 591 -3 4 591 601 149 141 90 chr3LHet 911188 911365 -1644126 + DNAREP1_DM LINE Penelope 370 555 -39 4 591 22 0 0 0 chr3LHet 911774 911796 -1643695 + AT_rich Low_complexity Low_complexity 1 22 0 4 591 212 125 50 0 chr3LHet 911796 911836 -1643655 + (CATA)n Simple_repeat Simple_repeat 2 43 0 4 591 306 226 71 57 chr3LHet 911868 912009 -1643482 + DNAREP1_DM LINE Penelope 20 162 -432 4 591 567 186 47 0 chr3LHet 912509 912635 -1642856 - DMCR1A LINE CR1 -289 4181 4050 4 591 290 74 278 0 chr3LHet 912635 912689 -1642802 + DNAREP1_DM LINE Penelope 1 69 -525 4 591 1305 114 4 35 chr3LHet 912682 912909 -1642582 + DNAREP1_DM LINE Penelope 375 594 0 4 591 862 213 128 16 chr3LHet 912864 913170 -1642321 - DMCR1A LINE CR1 -375 4095 3756 4 591 289 160 390 0 chr3LHet 913188 913288 -1642203 - DMCR1A LINE CR1 -1562 2908 2770 4 591 512 174 18 0 chr3LHet 913296 913405 -1642086 - DMCR1A LINE CR1 -1988 2482 2372 4 591 23 0 0 0 chr3LHet 913523 913546 -1641945 + AT_rich Low_complexity Low_complexity 1 23 0 4 591 363 157 125 19 chr3LHet 913869 913973 -1641518 + DM297_LTR LTR Gypsy 282 396 -18 4 591 331 78 45 30 chr3LHet 913989 914055 -1641436 + DM297_I LTR Gypsy 1 67 -6100 4 591 1617 166 48 34 chr3LHet 914061 914669 -1640822 + DNAREP1_DM LINE Penelope 2 491 -103 4 591 311 298 26 26 chr3LHet 915578 915733 -1639758 - BLASTOPIA_I LTR Gypsy -773 3708 3554 4 591 25 31 0 0 chr3LHet 916296 916328 -1639163 + AT_rich Low_complexity Low_complexity 1 32 0 4 591 1634 125 58 32 chr3LHet 916449 916797 -1638694 - Gypsy12A_LTR LTR Gypsy -995 1285 929 4 591 537 56 0 0 chr3LHet 916828 916899 -1638592 - Mariner2_DM DNA Tc1 0 912 842 4 591 2687 68 31 5 chr3LHet 916898 917282 -1638209 - Mariner2_DM DNA Tc1 -195 717 324 4 591 25 0 0 0 chr3LHet 917291 917316 -1638175 + AT_rich Low_complexity Low_complexity 1 25 0 4 73 2278 176 103 83 chr3LHet 917316 918096 -1637395 - Gypsy12A_LTR LTR Gypsy -1485 795 1 4 592 1442 119 13 9 chr3LHet 918099 918327 -1637164 - Gypsy12_I LTR Gypsy -5 5541 5313 4 592 2861 170 81 2 chr3LHet 918328 918871 -1636620 - Gypsy12_I LTR Gypsy -433 5113 4528 4 592 3267 42 59 0 chr3LHet 918890 919361 -1636130 - DOC5_DM LINE Jockey 0 4682 4184 4 592 8014 60 134 49 chr3LHet 919360 920730 -1634761 - DOC5_DM LINE Jockey -657 4025 2540 4 592 1672 41 0 0 chr3LHet 920752 920973 -1634518 + DOC5_DM LINE Jockey 1712 1932 -2750 4 592 6088 44 29 0 chr3LHet 920967 921807 -1633684 - DOC5_DM LINE Jockey -2974 1708 845 4 592 3912 26 78 0 chr3LHet 921802 922330 -1633161 - DOC5_DM LINE Jockey -4113 569 1 4 592 3035 191 185 1 chr3LHet 922327 923165 -1632326 - Gypsy12_I LTR Gypsy -1002 4544 3553 4 592 711 131 20 68 chr3LHet 924117 924264 -1631227 - Invader1_LTR LTR Gypsy -281 142 3 4 592 255 167 0 0 chr3LHet 924266 924308 -1631183 - Invader1_I LTR Gypsy 0 3186 3145 4 592 13393 112 110 44 chr3LHet 924370 924505 -1630986 - Invader1_I LTR Gypsy -49 3137 2975 4 592 339 44 0 0 chr3LHet 924505 924550 -1630941 + (TAA)n Simple_repeat Simple_repeat 2 46 0 4 592 13393 112 110 44 chr3LHet 924550 927092 -1628399 - Invader1_I LTR Gypsy -212 2974 283 4 592 920 117 7 7 chr3LHet 927092 927238 -1628253 - Invader1_LTR LTR Gypsy -3 420 275 4 592 378 241 7 58 chr3LHet 927781 927935 -1627556 - Gypsy8_I LTR Gypsy -4118 229 84 4 592 342 162 75 0 chr3LHet 928038 928118 -1627373 - Gypsy8_I LTR Gypsy -4261 86 1 4 592 590 186 1 128 chr3LHet 928149 928362 -1627129 - Gypsy8_LTR LTR Gypsy -3 301 67 4 592 646 133 26 0 chr3LHet 928396 928509 -1626982 - Invader1_LTR LTR Gypsy -281 142 27 4 592 852 189 47 0 chr3LHet 928515 928705 -1626786 - DNAREP1_DM LINE Penelope -115 479 281 4 592 714 58 135 0 chr3LHet 929196 929300 -1626191 + DNAREP1_DM LINE Penelope 374 491 -103 4 592 1194 115 55 0 chr3LHet 929455 929655 -1625836 + Gypsy12A_LTR LTR Gypsy 30 240 -2040 4 592 1240 129 142 36 chr3LHet 929654 929984 -1625507 + Gypsy12A_LTR LTR Gypsy 883 1247 -1033 4 592 307 307 100 31 chr3LHet 931138 931427 -1624064 + BLASTOPIA_I LTR Gypsy 2824 3132 -1349 4 592 402 329 35 21 chr3LHet 931496 931779 -1623712 + BLASTOPIA_I LTR Gypsy 3366 3652 -829 4 592 26 30 0 0 chr3LHet 934145 934178 -1621313 + AT_rich Low_complexity Low_complexity 1 33 0 4 592 1542 296 26 31 chr3LHet 934252 935057 -1620434 - HMSBEAGLE_I LTR Gypsy -753 5776 4976 4 592 2317 305 64 30 chr3LHet 935127 938163 -1617328 - HMSBEAGLE_I LTR Gypsy -1939 4590 1450 4 592 26 50 0 0 chr3LHet 938588 938628 -1616863 + AT_rich Low_complexity Low_complexity 1 40 0 4 592 25 80 0 39 chr3LHet 938693 938797 -1616694 + AT_rich Low_complexity Low_complexity 1 100 0 4 592 1498 167 69 29 chr3LHet 939891 940237 -1615254 - DMCR1A LINE CR1 -301 4169 3810 4 592 1607 159 179 6 chr3LHet 940311 940664 -1614827 + DMRT1B LINE R1 2111 2524 -2659 4 592 1217 189 75 4 chr3LHet 940653 940918 -1614573 + DMRT1B LINE R1 4458 4741 -442 4 592 530 134 80 9 chr3LHet 940925 941038 -1614453 + DNAREP1_DM LINE Penelope 162 282 -312 4 592 205 51 50 25 chr3LHet 941339 941379 -1614112 + (TAATG)n Simple_repeat Simple_repeat 1 41 0 4 592 265 321 9 9 chr3LHet 942168 942278 -1613213 - NOMAD_I LTR Gypsy -283 6289 6180 4 592 327 346 58 0 chr3LHet 942750 942993 -1612498 - NOMAD_I LTR Gypsy -1823 4749 4493 4 592 384 294 126 8 chr3LHet 943134 943486 -1612005 - NOMAD_I LTR Gypsy -2375 4197 3768 4 592 402 325 15 10 chr3LHet 943612 943817 -1611674 - NOMAD_I LTR Gypsy -3055 3517 3312 4 592 308 254 113 73 chr3LHet 943954 944158 -1611333 - NOMAD_I LTR Gypsy -3960 2612 2401 4 592 413 136 173 0 chr3LHet 944946 945027 -1610464 + DNAREP1_DM LINE Penelope 440 534 -60 4 592 280 303 189 0 chr3LHet 945919 946104 -1609387 - Invader6_I LTR Gypsy -1480 2619 2400 4 592 212 194 56 0 chr3LHet 946651 946723 -1608768 + (TTA)n Simple_repeat Simple_repeat 1 76 0 4 592 1056 166 43 31 chr3LHet 946726 946981 -1608510 - ROO_I LTR Pao -390 7866 7609 4 592 994 51 14 0 chr3LHet 946988 947126 -1608365 - G_DM LINE Jockey 0 4346 4207 4 592 1367 163 70 0 chr3LHet 947116 947373 -1608118 - ROO_I LTR Pao -641 7615 7341 4 592 485 120 0 0 chr3LHet 947371 947446 -1608045 - ROO_I LTR Pao -1357 6899 6825 4 592 894 196 40 5 chr3LHet 947529 947729 -1607762 - DNAREP1_DM LINE Penelope -376 218 12 4 592 2268 134 39 29 chr3LHet 947740 948044 -1607447 - DNAREP1_DM LINE Penelope -40 554 247 4 592 207 69 0 0 chr3LHet 948044 948073 -1607418 + (TTA)n Simple_repeat Simple_repeat 2 30 0 4 592 2268 142 37 27 chr3LHet 948073 948200 -1607291 - DNAREP1_DM LINE Penelope -262 332 136 4 592 308 269 159 19 chr3LHet 948899 949157 -1606334 - Ulysses_I LTR Gypsy -221 6160 5867 4 592 308 295 59 46 chr3LHet 949205 949443 -1606048 - Ulysses_I LTR Gypsy -2994 3387 3147 4 592 1083 208 120 24 chr3LHet 949670 950094 -1605397 + ROO_I LTR Pao 6357 6821 -1435 4 592 2164 119 167 0 chr3LHet 950134 950554 -1604937 + DNAREP1_DM LINE Penelope 1 490 -104 4 592 3123 132 61 20 chr3LHet 950557 951144 -1604347 - QUASIMODO_LTR LTR Gypsy -3 655 45 4 592 40965 35 33 1 chr3LHet 951159 956048 -1599443 - DMRT1B LINE R1 0 5183 143 4 592 180 0 0 0 chr3LHet 956048 956068 -1599423 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 4 592 40965 35 33 1 chr3LHet 956068 956197 -1599294 - DMRT1B LINE R1 -5041 142 2 4 592 5731 11 3 1 chr3LHet 956252 956909 -1598582 + QUASIMODO_LTR LTR Gypsy 1 658 0 4 592 3062 14 0 8 chr3LHet 956909 957268 -1598223 + QUASIMODO_I LTR Gypsy 1 356 -5704 4 592 44693 11 13 0 chr3LHet 957265 962595 -1592896 + QUASIMODO_I LTR Gypsy 662 6060 0 4 592 5866 5 0 1 chr3LHet 962595 963254 -1592237 + QUASIMODO_LTR LTR Gypsy 1 658 0 4 592 1152 81 91 0 chr3LHet 963274 963460 -1592031 + QUASIMODO_LTR LTR Gypsy 1 203 -455 4 592 4829 34 2 2 chr3LHet 963462 964056 -1591435 + IDEFIX_LTR LTR Gypsy 1 594 0 4 592 24 0 0 0 chr3LHet 964246 964270 -1591221 + AT_rich Low_complexity Low_complexity 1 24 0 4 592 28831 48 12 4 chr3LHet 964583 968304 -1587187 + IDEFIX_I LTR Gypsy 1 3750 -1878 4 592 1419 71 0 0 chr3LHet 968302 968498 -1586993 + IDEFIX_I LTR Gypsy 3951 4146 -1482 4 592 366 245 0 0 chr3LHet 968488 968590 -1586901 + ROO_I LTR Pao 7797 7898 -358 4 592 6454 334 33 33 chr3LHet 970134 974216 -1581275 - GTWIN_I LTR Gypsy -1534 4887 804 4 592 24 96 0 0 chr3LHet 975527 975600 -1579891 + AT_rich Low_complexity Low_complexity 1 73 0 4 592 25 0 0 0 chr3LHet 976839 976864 -1578627 + AT_rich Low_complexity Low_complexity 1 25 0 4 592 511 313 45 71 chr3LHet 978222 978894 -1576597 - BURDOCK_I LTR Gypsy -2932 3489 2668 4 592 1342 35 79 0 chr3LHet 978729 978931 -1576560 - TLD2 Unknown Unknown 0 218 1 4 592 325 275 0 0 chr3LHet 978862 978942 -1576549 - Gypsy_DS LTR Gypsy -4187 3335 3256 4 592 403 335 33 40 chr3LHet 980462 980870 -1574621 - Gypsy3_I LTR Gypsy -5228 1784 1179 4 592 9311 23 0 10 chr3LHet 981000 982116 -1573375 - PROTOP_A DNA P 0 1105 1 4 592 2105 28 12 0 chr3LHet 982116 982368 -1573123 - Invader2_LTR LTR Gypsy -11 255 1 4 592 47 0 0 0 chr3LHet 983177 983224 -1572267 + AT_rich Low_complexity Low_complexity 1 47 0 4 592 22707 39 9 2 chr3LHet 983667 986473 -1569018 - STALKER4_I LTR Gypsy -694 5836 3013 4 592 7128 150 114 24 chr3LHet 986472 987983 -1567508 - STALKER4_I LTR Gypsy -4256 2274 627 4 592 503 271 0 7 chr3LHet 987999 988140 -1567351 - STALKER4_I LTR Gypsy -6155 375 236 4 592 24 67 0 0 chr3LHet 988771 988816 -1566675 + AT_rich Low_complexity Low_complexity 1 45 0 4 592 310 167 24 0 chr3LHet 989075 989159 -1566332 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 592 272 173 0 19 chr3LHet 990362 990415 -1565076 + Gypsy8_LTR LTR Gypsy 1 52 -252 4 592 8013 97 71 2 chr3LHet 991131 992726 -1562765 - S_DM DNA Tc1 -31 1705 1 4 592 25 99 0 0 chr3LHet 993012 993093 -1562398 + AT_rich Low_complexity Low_complexity 1 81 0 4 592 622 95 29 9 chr3LHet 993293 993409 -1562082 + DNAREP1_DM LINE Penelope 137 332 -262 4 592 3426 38 14 12 chr3LHet 993424 993846 -1561645 - G5_DM LINE Jockey 0 4856 4434 4 592 359 18 0 0 chr3LHet 993909 993965 -1561526 - FW_DM LINE Jockey -4 4688 4633 4 592 389 347 65 65 chr3LHet 994391 995523 -1559968 - Copia2_I LTR Copia -283 3879 2748 4 592 333 340 29 59 chr3LHet 996203 996704 -1558787 - Copia2_I LTR Copia -2263 1899 1497 4 592 6663 13 26 0 chr3LHet 998126 998897 -1556594 - DMRT1A LINE R1 -2 5181 4391 4 592 9876 6 5 0 chr3LHet 998897 1000000 -1555491 - DMRT1A LINE R1 -2714 2469 1361 4 592 3598 18 29 0 chr3LHet 1000000 1000454 -1555037 - DMRT1A LINE R1 -3823 1360 894 4 592 202 143 0 28 chr3LHet 1000454 1000490 -1555001 + (TATG)n Simple_repeat Simple_repeat 2 36 0 4 592 10154 33 30 0 chr3LHet 1000673 1001962 -1553529 - FW_DM LINE Jockey -3360 1332 5 4 592 706 126 67 0 chr3LHet 1001984 1002103 -1553388 + DNAREP1_DM LINE Penelope 338 464 -130 4 592 1632 65 4 0 chr3LHet 1003003 1003251 -1552240 - DM297_I LTR Gypsy -343 5824 5576 4 592 1987 46 0 0 chr3LHet 1003262 1003521 -1551970 - DM297_I LTR Gypsy -785 5382 5124 4 592 7056 59 18 21 chr3LHet 1003514 1004570 -1550921 - DM297_I LTR Gypsy -1862 4305 3253 4 592 2669 70 133 4 chr3LHet 1004577 1005049 -1550442 - DM297_I LTR Gypsy -3749 2418 1886 4 592 3687 70 84 23 chr3LHet 1005064 1006120 -1549371 - DM297_I LTR Gypsy -5045 1122 2 4 592 1741 104 119 57 chr3LHet 1006123 1006511 -1548980 - DM297_LTR LTR Gypsy -2 412 1 4 592 21 0 0 0 chr3LHet 1007169 1007190 -1548301 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 21 0 0 0 chr3LHet 1007227 1007248 -1548243 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 22 0 0 0 chr3LHet 1007374 1007396 -1548095 + AT_rich Low_complexity Low_complexity 1 22 0 4 592 21 0 0 0 chr3LHet 1007811 1007832 -1547659 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 274 297 87 64 chr3LHet 1010251 1010517 -1544974 + BLASTOPIA_I LTR Gypsy 2668 2939 -1542 4 592 40529 1 0 0 chr3LHet 1011266 1015957 -1539534 + FW_DM LINE Jockey 1 4692 0 4 592 370 321 0 0 chr3LHet 1016241 1016381 -1539110 + BLASTOPIA_I LTR Gypsy 4237 4376 -105 4 592 3927 47 68 0 chr3LHet 1016598 1017189 -1538302 - PROTOP_B DNA P 0 1153 523 4 592 743 43 0 0 chr3LHet 1017193 1017285 -1538206 - PROTOP_B DNA P -1060 93 2 4 592 21 0 0 0 chr3LHet 1017807 1017828 -1537663 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 27 29 0 0 chr3LHet 1018471 1018505 -1536986 + AT_rich Low_complexity Low_complexity 1 34 0 4 592 21 0 0 0 chr3LHet 1019156 1019177 -1536314 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 26 50 0 0 chr3LHet 1019226 1019266 -1536225 + AT_rich Low_complexity Low_complexity 1 40 0 4 592 1330 111 81 0 chr3LHet 1020059 1020293 -1535198 - DNAREP1_DM LINE Penelope -337 257 5 4 592 518 170 0 0 chr3LHet 1020710 1020804 -1534687 - DMRT1B LINE R1 -258 4925 4832 4 592 31759 20 33 1 chr3LHet 1020805 1024760 -1530731 - DMRT1B LINE R1 -388 4795 713 4 592 448 0 0 0 chr3LHet 1024761 1024815 -1530676 - QUASIMODO_LTR LTR Gypsy -604 54 1 4 592 48500 10 13 2 chr3LHet 1024815 1030808 -1524683 - QUASIMODO_I LTR Gypsy 0 6060 1 4 592 5653 3 0 0 chr3LHet 1030808 1031465 -1524026 - QUASIMODO_LTR LTR Gypsy 0 658 2 4 592 401 103 15 0 chr3LHet 1031465 1031533 -1523958 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 592 222 231 0 0 chr3LHet 1031610 1031675 -1523816 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 592 21 0 0 0 chr3LHet 1031769 1031790 -1523701 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 236 253 90 50 chr3LHet 1031863 1031963 -1523528 + DNAREP1_DM LINE Penelope 489 592 -2 4 592 350 149 10 147 chr3LHet 1032202 1032304 -1523187 - DNAREP1_DM LINE Penelope -6 588 501 4 592 1069 50 12 12 chr3LHet 1032308 1032471 -1523020 + S2_DM DNA Tc1 1 163 -1572 4 592 314 173 0 58 chr3LHet 1032497 1032583 -1522908 - DNAREP1_DM LINE Penelope -26 568 488 4 592 284 155 117 58 chr3LHet 1032706 1032809 -1522682 - Gypsy2_LTR LTR Gypsy -150 203 95 4 592 3941 233 7 40 chr3LHet 1032823 1033814 -1521677 - Gypsy2_I LTR Gypsy -91 6044 5087 4 592 240 353 0 0 chr3LHet 1033966 1034068 -1521423 - G2_DM LINE Jockey -2720 382 281 4 592 24 32 0 0 chr3LHet 1035023 1035054 -1520437 + AT_rich Low_complexity Low_complexity 1 31 0 4 592 245 279 0 0 chr3LHet 1035060 1035128 -1520363 + Invader4_I LTR Gypsy 1235 1302 -1111 4 592 932 342 61 29 chr3LHet 1035153 1036090 -1519401 + Invader6_I LTR Gypsy 1629 2595 -1504 4 592 249 278 22 11 chr3LHet 1036506 1036597 -1518894 + Invader4_I LTR Gypsy 1783 1874 -539 4 592 828 139 375 0 chr3LHet 1037408 1037620 -1517871 + DNAREP1_DM LINE Penelope 304 594 0 4 592 195 42 0 0 chr3LHet 1037909 1037933 -1517558 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 592 282 56 0 0 chr3LHet 1037969 1038005 -1517486 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 592 4577 4 2 0 chr3LHet 1038005 1038539 -1516952 - QUASIMODO_LTR LTR Gypsy 0 658 124 4 592 614 313 23 30 chr3LHet 1038620 1039015 -1516476 + Invader5_I LTR Gypsy 1228 1619 -1715 4 592 2867 306 19 21 chr3LHet 1039078 1040345 -1515146 + Invader1_I LTR Gypsy 1301 2564 -622 4 592 600 0 0 0 chr3LHet 1041380 1041453 -1514038 - QUASIMODO_LTR LTR Gypsy -531 127 55 4 592 6465 16 4 0 chr3LHet 1041455 1042227 -1513264 - DMRT1B LINE R1 0 5183 4409 4 592 1476 294 2 2 chr3LHet 1042227 1042700 -1512791 + Invader1_I LTR Gypsy 1744 2216 -970 4 592 18759 13 0 0 chr3LHet 1042697 1044925 -1510566 - DMRT1B LINE R1 -89 5094 2866 4 592 3574 37 2 0 chr3LHet 1044918 1045374 -1510117 - DMRT1B LINE R1 -2498 2685 2229 4 592 1273 139 151 0 chr3LHet 1045370 1045622 -1509869 - DMRT1B LINE R1 -3113 2070 1781 4 592 498 178 259 0 chr3LHet 1045619 1045754 -1509737 - DMRT1B LINE R1 -3534 1649 1480 4 592 698 165 0 15 chr3LHet 1045922 1046057 -1509434 + DMLTR5 LTR Gypsy 134 266 0 4 592 573 149 70 9 chr3LHet 1046056 1046171 -1509320 + HMSBEAGLE_I LTR Gypsy 1 122 -6407 4 592 552 183 56 103 chr3LHet 1046152 1046365 -1509126 + HMSBEAGLE_I LTR Gypsy 279 481 -6048 4 592 242 200 59 10 chr3LHet 1046330 1046431 -1509060 + ROO_I LTR Pao 648 753 -7503 4 592 7829 109 23 2 chr3LHet 1046448 1047652 -1507839 + HMSBEAGLE_I LTR Gypsy 1143 2372 -4157 4 592 2900 87 26 0 chr3LHet 1047650 1048074 -1507417 + HMSBEAGLE_I LTR Gypsy 2521 2955 -3574 4 592 363 119 17 0 chr3LHet 1048074 1048133 -1507358 + HMSBEAGLE_I LTR Gypsy 3952 4011 -2518 4 9 7754 109 77 9 chr3LHet 1048123 1049783 -1505708 + HMSBEAGLE_I LTR Gypsy 4183 5955 -574 4 593 675 111 183 144 chr3LHet 1049779 1050063 -1505428 + HMSBEAGLE_I LTR Gypsy 6072 6366 -163 4 593 315 87 0 0 chr3LHet 1050284 1050330 -1505161 + HMSBEAGLE_I LTR Gypsy 6360 6405 -124 4 593 186 174 0 0 chr3LHet 1050382 1050428 -1505063 + A-rich Low_complexity Low_complexity 1 46 0 4 593 302 87 0 0 chr3LHet 1050450 1050496 -1504995 + HMSBEAGLE_I LTR Gypsy 6404 6449 -80 4 593 276 211 0 14 chr3LHet 1050494 1050566 -1504925 + DMLTR5 LTR Gypsy 188 258 -8 4 593 1209 116 76 36 chr3LHet 1050561 1050784 -1504707 - DNAREP1_DM LINE Penelope -15 579 348 4 593 34 24 0 0 chr3LHet 1050861 1050902 -1504589 + AT_rich Low_complexity Low_complexity 1 41 0 4 593 580 105 0 0 chr3LHet 1050902 1050988 -1504503 - DNAREP1_DM LINE Penelope -493 101 16 4 593 365 280 0 0 chr3LHet 1051745 1051845 -1503646 + DIVER2_I LTR Pao 3506 3605 -542 4 593 890 214 101 7 chr3LHet 1051846 1052158 -1503333 - PROTOP DNA P 0 4480 4137 4 593 29 0 0 0 chr3LHet 1052344 1052373 -1503118 + AT_rich Low_complexity Low_complexity 1 29 0 4 593 1470 38 0 0 chr3LHet 1052993 1053290 -1502201 + (TAA)n Simple_repeat Simple_repeat 1 297 0 4 593 11221 94 135 5 chr3LHet 1054221 1056854 -1498637 - DMCR1A LINE CR1 -68 4402 1426 4 593 576 107 52 35 chr3LHet 1057260 1057376 -1498115 + DM297_LTR LTR Gypsy 279 396 -18 4 593 740 132 100 8 chr3LHet 1057360 1057626 -1497865 - DNAREP1_DM LINE Penelope -170 424 8 4 593 1638 141 61 82 chr3LHet 1058246 1058625 -1496866 + MICROPIA_LTR LTR Gypsy 93 463 -13 4 593 1512 138 171 121 chr3LHet 1059448 1059952 -1495539 + DNAREP1_DM LINE Penelope 1 529 -65 4 593 270 241 92 9 chr3LHet 1059992 1060101 -1495390 - IDEFIX_I LTR Gypsy -985 4643 4526 4 593 999 233 0 4 chr3LHet 1060097 1060343 -1495148 - IDEFIX_I LTR Gypsy -1422 4206 3962 4 593 3521 55 91 0 chr3LHet 1060375 1060890 -1494601 + DMCR1A LINE CR1 3909 4470 0 4 593 2785 246 123 14 chr3LHet 1060982 1062017 -1493474 - IDEFIX_I LTR Gypsy -1968 3660 2513 4 593 482 183 0 0 chr3LHet 1062046 1062139 -1493352 - IDEFIX_I LTR Gypsy -3188 2440 2348 4 593 1959 237 63 2 chr3LHet 1062140 1062660 -1492831 - IDEFIX_I LTR Gypsy -3404 2224 1673 4 593 6957 25 7 0 chr3LHet 1062669 1063513 -1491978 - DOC3_DM LINE Jockey -1765 2975 2126 4 593 2667 37 11 11 chr3LHet 1063514 1063869 -1491622 - DOC3_DM LINE Jockey -2874 1866 1512 4 593 2884 40 33 2 chr3LHet 1063851 1064247 -1491244 - DOC3_DM LINE Jockey -3690 1050 643 4 593 615 0 0 0 chr3LHet 1064245 1064316 -1491175 - DOC3_DM LINE Jockey -4669 71 1 4 593 831 256 169 6 chr3LHet 1064333 1064659 -1490832 - IDEFIX_I LTR Gypsy -4574 1054 676 4 593 850 239 11 18 chr3LHet 1064689 1064966 -1490525 - IDEFIX_I LTR Gypsy -5111 517 243 4 593 21 36 0 0 chr3LHet 1065359 1065387 -1490104 + AT_rich Low_complexity Low_complexity 1 28 0 4 593 299 101 58 0 chr3LHet 1065544 1065613 -1489878 - IDEFIX_LTR LTR Gypsy -18 576 504 4 593 2675 66 13 10 chr3LHet 1065614 1065999 -1489492 - DMTOM1_LTR LTR Gypsy -23 387 2 4 593 1050 270 39 28 chr3LHet 1065998 1066508 -1488983 - DM297_I LTR Gypsy 0 6112 5597 4 593 1334 239 120 16 chr3LHet 1066522 1067191 -1488300 - DM297_I LTR Gypsy -1112 5000 4307 4 593 519 202 0 0 chr3LHet 1067201 1067300 -1488191 - DM297_I LTR Gypsy -2078 4034 3936 4 593 1158 200 60 16 chr3LHet 1067310 1067700 -1487791 - DM297_I LTR Gypsy -2771 3396 2908 4 593 1275 213 40 0 chr3LHet 1067699 1067999 -1487492 - DM297_I LTR Gypsy -3522 2645 2334 4 593 1884 261 82 58 chr3LHet 1068008 1069105 -1486386 - TOM_I LTR Gypsy -3894 2218 1096 4 593 2969 57 57 0 chr3LHet 1069133 1069539 -1485952 - Baggins1 LINE LOA -45 5408 4980 4 593 2875 49 159 5 chr3LHet 1069543 1069977 -1485514 - Baggins1 LINE LOA -980 4473 3973 4 593 1975 41 79 0 chr3LHet 1069971 1070237 -1485254 - Baggins1 LINE LOA -1645 3808 3522 4 593 9265 37 9 0 chr3LHet 1070250 1071479 -1484012 - MDG1_I LTR Gypsy -381 6215 4976 4 593 19589 96 79 29 chr3LHet 1071478 1075599 -1479892 - MDG1_I LTR Gypsy -2027 4569 242 4 593 9377 40 32 0 chr3LHet 1075614 1076809 -1478682 - Baggins1 LINE LOA -2130 3323 2091 4 593 5786 52 52 0 chr3LHet 1076810 1077585 -1477906 - Baggins1 LINE LOA -3643 1810 996 4 593 2630 89 28 4 chr3LHet 1077583 1078052 -1477439 - Baggins1 LINE LOA -4856 597 3 4 593 1325 259 68 30 chr3LHet 1078074 1078864 -1476627 - DM297_I LTR Gypsy -311 5801 5065 4 593 2789 65 111 9 chr3LHet 1078893 1079537 -1475954 + I_DM LINE I 4750 5459 -772 4 593 1314 47 366 77 chr3LHet 1079537 1079783 -1475708 + NINJA_LTR LTR Pao 1 317 0 4 593 16355 78 68 14 chr3LHet 1079783 1082484 -1473007 + NINJA_I LTR Pao 1 2847 -3164 4 593 16183 26 1 1 chr3LHet 1082461 1084473 -1471018 + NINJA_I LTR Pao 3999 6011 0 4 593 2358 44 3 28 chr3LHet 1084473 1084798 -1470693 + NINJA_LTR LTR Pao 1 317 0 4 593 3089 146 81 84 chr3LHet 1084817 1085720 -1469771 - DM297_I LTR Gypsy -1307 4805 3924 4 593 377 69 17 0 chr3LHet 1085796 1085854 -1469637 - DNAREP1_DM LINE Penelope 0 594 536 4 593 1360 139 48 0 chr3LHet 1085860 1086133 -1469358 - DNAREP1_DM LINE Penelope -263 331 46 4 593 6191 50 14 17 chr3LHet 1086253 1087152 -1468339 - DM297_I LTR Gypsy -2018 4149 3253 4 593 2481 81 146 7 chr3LHet 1087159 1087592 -1467899 - DM297_I LTR Gypsy -3749 2418 1926 4 593 4814 45 0 0 chr3LHet 1087590 1088208 -1467283 - FW_DM LINE Jockey -4070 622 5 4 593 706 126 67 0 chr3LHet 1088230 1088349 -1467142 + DNAREP1_DM LINE Penelope 338 464 -130 4 593 1632 65 4 0 chr3LHet 1089247 1089495 -1465996 - DM297_I LTR Gypsy -343 5824 5576 4 593 1987 46 0 0 chr3LHet 1089506 1089765 -1465726 - DM297_I LTR Gypsy -785 5382 5124 4 593 2810 87 0 5 chr3LHet 1089758 1090187 -1465304 - DM297_I LTR Gypsy -1862 4305 3879 4 593 3109 128 64 0 chr3LHet 1090188 1090751 -1464740 - DM297_I LTR Gypsy -2885 3282 2684 4 593 1318 179 155 14 chr3LHet 1090747 1091121 -1464370 - DM297_I LTR Gypsy -3815 2352 1926 4 593 772 177 0 0 chr3LHet 1092259 1092417 -1463074 + MDG1_I LTR Gypsy 5090 5247 -1349 4 593 502 168 0 99 chr3LHet 1092438 1092583 -1462908 + MAX_I LTR Pao 36 165 -7749 4 593 1036 209 34 36 chr3LHet 1092583 1092940 -1462551 - IDEFIX_LTR LTR Gypsy 0 594 239 4 593 331 65 0 0 chr3LHet 1093092 1093138 -1462353 - IDEFIX_LTR LTR Gypsy -548 46 1 4 593 1216 219 47 12 chr3LHet 1093138 1093540 -1461951 - IDEFIX_I LTR Gypsy 0 5628 5213 4 593 1151 225 124 0 chr3LHet 1093759 1094123 -1461368 - IDEFIX_I LTR Gypsy -1260 4368 3960 4 593 299 231 44 0 chr3LHet 1094132 1094223 -1461268 - IDEFIX_I LTR Gypsy -1772 3856 3762 4 593 2623 253 102 12 chr3LHet 1094243 1095222 -1460269 - IDEFIX_I LTR Gypsy -2050 3578 2513 4 593 482 183 0 0 chr3LHet 1095251 1095344 -1460147 - IDEFIX_I LTR Gypsy -3188 2440 2348 4 593 1959 237 63 2 chr3LHet 1095345 1095865 -1459626 - IDEFIX_I LTR Gypsy -3404 2224 1673 4 593 6942 26 7 0 chr3LHet 1095874 1096718 -1458773 - DOC3_DM LINE Jockey -1765 2975 2126 4 593 2667 37 11 11 chr3LHet 1096719 1097074 -1458417 - DOC3_DM LINE Jockey -2874 1866 1512 4 593 2884 40 33 2 chr3LHet 1097056 1097452 -1458039 - DOC3_DM LINE Jockey -3690 1050 643 4 593 446 30 72 43 chr3LHet 1097450 1097519 -1457972 - DOC3_DM LINE Jockey -4669 71 1 4 593 817 259 169 6 chr3LHet 1097536 1097862 -1457629 - IDEFIX_I LTR Gypsy -4574 1054 676 4 593 869 235 11 18 chr3LHet 1097892 1098169 -1457322 - IDEFIX_I LTR Gypsy -5111 517 243 4 593 21 36 0 0 chr3LHet 1098562 1098590 -1456901 + AT_rich Low_complexity Low_complexity 1 28 0 4 593 299 101 58 0 chr3LHet 1098747 1098816 -1456675 - IDEFIX_LTR LTR Gypsy -18 576 504 4 593 2675 66 13 10 chr3LHet 1098817 1099202 -1456289 - DMTOM1_LTR LTR Gypsy -23 387 2 4 593 1050 270 39 28 chr3LHet 1099201 1099711 -1455780 - TOM_I LTR Gypsy 0 6112 5597 4 593 1676 272 115 3 chr3LHet 1099725 1100404 -1455087 - TOM_I LTR Gypsy -1112 5000 4246 4 593 519 202 0 0 chr3LHet 1100414 1100513 -1454978 - TOM_I LTR Gypsy -2078 4034 3936 4 593 1158 200 60 16 chr3LHet 1100523 1100913 -1454578 - TOM_I LTR Gypsy -2771 3396 2908 4 593 1275 213 40 0 chr3LHet 1100912 1101212 -1454279 - TOM_I LTR Gypsy -3522 2645 2334 4 593 1885 261 82 58 chr3LHet 1101220 1102317 -1453174 - TOM_I LTR Gypsy -3894 2218 1096 4 593 2969 57 57 0 chr3LHet 1102345 1102751 -1452740 - Baggins1 LINE LOA -45 5408 4980 4 593 12149 40 64 2 chr3LHet 1102755 1104370 -1451121 - Baggins1 LINE LOA -980 4473 2759 4 593 40 21 0 0 chr3LHet 1104814 1104861 -1450630 + AT_rich Low_complexity Low_complexity 1 47 0 4 593 350 322 14 16 chr3LHet 1105854 1106095 -1449396 + BURDOCK_I LTR Gypsy 850 997 -4863 4 593 26 0 0 0 chr3LHet 1106858 1106884 -1448607 + AT_rich Low_complexity Low_complexity 1 26 0 4 593 308 307 0 0 chr3LHet 1107761 1107862 -1447629 + Gypsy_DS LTR Gypsy 3235 3335 -4187 4 593 1425 28 28 0 chr3LHet 1107793 1108005 -1447486 + TLD2 Unknown Unknown 1 218 0 4 593 7369 37 158 1 chr3LHet 1109974 1110578 -1444913 + DMCR1A LINE CR1 2219 2894 -1576 4 593 213 65 0 0 chr3LHet 1110578 1110609 -1444882 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 4 593 7369 46 86 1 chr3LHet 1110609 1111343 -1444148 + DMCR1A LINE CR1 2895 3713 -757 4 593 2231 28 88 0 chr3LHet 1111341 1111806 -1443685 + DMCR1A LINE CR1 3965 4470 0 4 593 5799 3 3 3 chr3LHet 1114291 1114949 -1440542 - QUASIMODO_LTR LTR Gypsy 0 658 1 4 593 747 112 0 15 chr3LHet 1114974 1115110 -1440381 - S_DM DNA Tc1 0 1736 1603 4 593 9398 97 5 6 chr3LHet 1115123 1116486 -1439005 - S_DM DNA Tc1 -374 1362 1 4 593 219 69 0 0 chr3LHet 1116979 1117008 -1438483 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 593 3303 84 14 10 chr3LHet 1117008 1117502 -1437989 + ACCORD2_I LTR Gypsy 1874 2369 -4843 4 593 658 90 0 0 chr3LHet 1117503 1117592 -1437899 + ACCORD2_I LTR Gypsy 2676 2764 -4448 4 593 742 320 33 18 chr3LHet 1117607 1117944 -1437547 + Gypsy_DS LTR Gypsy 2994 3335 -4187 4 593 878 44 66 0 chr3LHet 1117880 1118017 -1437474 + TLD2 Unknown Unknown 1 146 -72 4 593 305 268 32 29 chr3LHet 1118171 1118311 -1437180 + BURDOCK_I LTR Gypsy 3296 3400 -2460 4 593 1176 65 0 194 chr3LHet 1119059 1119307 -1436184 + ACCORD2_I LTR Gypsy 2895 3094 -4118 4 593 2778 0 6 0 chr3LHet 1119317 1119636 -1435855 - QUASIMODO_LTR LTR Gypsy -337 321 1 4 593 783 112 0 0 chr3LHet 1119661 1119795 -1435696 - S_DM DNA Tc1 0 1736 1603 4 593 9451 95 5 6 chr3LHet 1119808 1121171 -1434320 - S_DM DNA Tc1 -374 1362 1 4 593 246 112 0 263 chr3LHet 1121538 1121671 -1433820 + ACCORD2_I LTR Gypsy 1931 2028 -5184 4 593 4490 6 0 0 chr3LHet 1121682 1122189 -1433302 + DM176_LTR LTR Gypsy 1 507 0 4 593 27973 3 8 21 chr3LHet 1122189 1125535 -1429956 + DM176_I LTR Gypsy 1 3301 -3119 4 593 427 0 0 0 chr3LHet 1125548 1125595 -1429896 + DM176_I LTR Gypsy 3582 3628 -2792 4 593 16526 1 0 0 chr3LHet 1125587 1127495 -1427996 + DM176_I LTR Gypsy 4513 6420 0 4 593 4490 6 0 0 chr3LHet 1127495 1128002 -1427489 + DM176_LTR LTR Gypsy 1 507 0 4 593 3374 86 14 10 chr3LHet 1128009 1128516 -1426975 + ACCORD2_I LTR Gypsy 1861 2369 -4843 4 593 658 90 0 0 chr3LHet 1128517 1128606 -1426885 + ACCORD2_I LTR Gypsy 2676 2764 -4448 4 593 742 320 33 18 chr3LHet 1128621 1128958 -1426533 + Gypsy_DS LTR Gypsy 2994 3335 -4187 4 593 878 44 66 0 chr3LHet 1128894 1129031 -1426460 + TLD2 Unknown Unknown 1 146 -72 4 593 355 226 57 48 chr3LHet 1129170 1129324 -1426167 + Gypsy4_I LTR Gypsy 3232 3400 -2460 4 593 12673 64 76 38 chr3LHet 1130072 1131999 -1423492 + ACCORD2_I LTR Gypsy 2895 4895 -2317 4 593 482 78 0 0 chr3LHet 1131997 1132061 -1423430 + ACCORD2_I LTR Gypsy 5383 5446 -1766 4 593 5688 49 12 15 chr3LHet 1132054 1132794 -1422697 + ACCORD2_I LTR Gypsy 5699 6436 -776 4 593 23 0 0 0 chr3LHet 1132855 1132878 -1422613 + AT_rich Low_complexity Low_complexity 1 23 0 4 593 1922 121 7 10 chr3LHet 1132969 1133279 -1422212 + DNAREP1_DM LINE Penelope 24 332 -262 4 593 2043 144 3 29 chr3LHet 1133301 1133681 -1421810 + DNAREP1_DM LINE Penelope 116 485 -109 4 593 34 42 0 0 chr3LHet 1134539 1134587 -1420904 + AT_rich Low_complexity Low_complexity 1 48 0 4 593 25 0 0 0 chr3LHet 1136336 1136361 -1419130 + AT_rich Low_complexity Low_complexity 1 25 0 4 593 29 28 0 0 chr3LHet 1138242 1138278 -1417213 + AT_rich Low_complexity Low_complexity 1 36 0 4 593 34 0 0 0 chr3LHet 1140438 1140472 -1415019 + AT_rich Low_complexity Low_complexity 1 34 0 4 593 33 0 0 0 chr3LHet 1142799 1142832 -1412659 + AT_rich Low_complexity Low_complexity 1 33 0 4 593 34 55 0 0 chr3LHet 1143371 1143426 -1412065 + AT_rich Low_complexity Low_complexity 1 55 0 4 593 21 71 0 0 chr3LHet 1144028 1144070 -1411421 + AT_rich Low_complexity Low_complexity 1 42 0 4 593 22 35 0 0 chr3LHet 1144081 1144110 -1411381 + AT_rich Low_complexity Low_complexity 1 29 0 4 593 61 45 0 0 chr3LHet 1144243 1144332 -1411159 + AT_rich Low_complexity Low_complexity 1 89 0 4 593 1173 97 109 18 chr3LHet 1144362 1144582 -1410909 + DNAREP1_DM LINE Penelope 2 241 -353 4 593 660 191 61 0 chr3LHet 1145050 1145181 -1410310 - DNAREP1_DM LINE Penelope -185 409 271 4 593 27 49 0 0 chr3LHet 1145387 1145428 -1410063 + AT_rich Low_complexity Low_complexity 1 41 0 4 593 22 0 0 0 chr3LHet 1145768 1145790 -1409701 + AT_rich Low_complexity Low_complexity 1 22 0 4 593 21 0 0 0 chr3LHet 1145921 1145942 -1409549 + AT_rich Low_complexity Low_complexity 1 21 0 4 593 1072 148 205 26 chr3LHet 1146179 1146577 -1408914 + DNAREP1_DM LINE Penelope 1 591 -3 4 593 279 287 169 0 chr3LHet 1146725 1146861 -1408630 - DIVER2_I LTR Pao -1400 2747 2589 4 593 960 299 65 29 chr3LHet 1147418 1147803 -1407688 - DIVER2_I LTR Pao -1831 2316 1918 4 593 643 316 8 8 chr3LHet 1147807 1148053 -1407438 - DIVER2_I LTR Pao -2344 1803 1558 4 593 580 75 92 51 chr3LHet 1148137 1148235 -1407256 - DNAREP1_DM LINE Penelope 0 594 493 4 593 216 0 0 0 chr3LHet 1149233 1149257 -1406234 + (TTA)n Simple_repeat Simple_repeat 2 25 0 4 593 1661 318 95 22 chr3LHet 1149406 1150844 -1404647 - Invader1_I LTR Gypsy -1222 3254 1301 4 593 25695 168 28 11 chr3LHet 1151070 1155572 -1399919 + Gypsy_I LTR Gypsy 1926 6504 -3 4 593 228 153 77 92 chr3LHet 1155601 1155666 -1399825 + Gypsy_DS LTR Gypsy 77 140 -7382 4 593 679 186 59 40 chr3LHet 1155718 1155920 -1399571 + Gypsy_LTR LTR Gypsy 257 462 -20 4 593 2880 89 25 62 chr3LHet 1155958 1156446 -1399045 - DOC5_DM LINE Jockey -1636 3046 2577 4 593 271 288 58 62 chr3LHet 1156444 1156703 -1398788 + Transib5 DNA Transib 26 283 -2718 4 593 23 54 0 0 chr3LHet 1156716 1156753 -1398738 + AT_rich Low_complexity Low_complexity 1 37 0 4 593 264 159 73 73 chr3LHet 1156896 1156964 -1398527 + Gypsy4_I LTR Gypsy 4324 4391 -1897 4 593 25 0 0 0 chr3LHet 1157328 1157353 -1398138 + AT_rich Low_complexity Low_complexity 1 25 0 4 593 39 92 0 0 chr3LHet 1158318 1158427 -1397064 + AT_rich Low_complexity Low_complexity 1 109 0 4 593 43 20 0 0 chr3LHet 1158981 1159031 -1396460 + AT_rich Low_complexity Low_complexity 1 50 0 4 593 2309 117 13 2 chr3LHet 1159047 1159443 -1396048 + STALKER4_I LTR Gypsy 5833 6232 -298 4 593 3198 47 25 14 chr3LHet 1159791 1160220 -1395271 - STALKER4_LTR LTR Gypsy -3 399 1 4 593 42074 9 1 1 chr3LHet 1160220 1165073 -1390418 - STALKER4_I LTR Gypsy 0 6530 1681 4 593 2386 176 47 34 chr3LHet 1165116 1165674 -1389817 - Stalker2_I LTR Gypsy -6547 855 291 4 593 25 0 0 0 chr3LHet 1165698 1165723 -1389768 + AT_rich Low_complexity Low_complexity 1 25 0 4 593 1287 66 0 6 chr3LHet 1165755 1165923 -1389568 - STALKER4_LTR LTR Gypsy -38 364 198 4 593 565 62 12 36 chr3LHet 1165902 1165985 -1389506 - STALKER4_LTR LTR Gypsy -321 81 1 4 593 948 234 0 0 chr3LHet 1165987 1166179 -1389312 - Gypsy6_I LTR Gypsy -4605 2407 2216 4 593 2877 299 16 17 chr3LHet 1166437 1167410 -1388081 - Gypsy6_I LTR Gypsy -5143 1869 642 4 593 21 57 0 0 chr3LHet 1167571 1167606 -1387885 + AT_rich Low_complexity Low_complexity 1 35 0 4 593 31 44 0 0 chr3LHet 1167644 1167689 -1387802 + AT_rich Low_complexity Low_complexity 1 45 0 4 593 182 91 0 29 chr3LHet 1167829 1167863 -1387628 + (TGG)n Simple_repeat Simple_repeat 2 34 0 4 593 515 18 0 0 chr3LHet 1167936 1167993 -1387498 - Gypsy6A_LTR LTR Gypsy -118 302 246 4 593 43190 1 0 0 chr3LHet 1168009 1172701 -1382790 - FW_DM LINE Jockey 0 4692 1 4 593 1520 96 64 44 chr3LHet 1172713 1172964 -1382527 - Gypsy6A_LTR LTR Gypsy -164 256 1 4 593 2357 97 112 157 chr3LHet 1172964 1173510 -1381981 - CIRCE LINE Composite -2185 4171 3651 4 593 488 36 0 0 chr3LHet 1173505 1173561 -1381930 - G3_DM LINE Jockey -4360 245 190 4 593 6597 175 109 91 chr3LHet 1173710 1176066 -1379425 - DOC4_DM LINE Jockey 0 4793 627 4 593 352 114 21 4 chr3LHet 1176084 1176147 -1379344 - DNAREP1_DM LINE Penelope -101 493 448 4 593 4478 255 54 33 chr3LHet 1176165 1179056 -1376435 + Gypsy8_I LTR Gypsy 435 3430 -3223 4 593 2342 109 34 34 chr3LHet 1179082 1179498 -1375993 + Gypsy8_I LTR Gypsy 3421 3836 -511 4 74 1462 68 50 110 chr3LHet 1179492 1179774 -1375717 + Gypsy8_I LTR Gypsy 4039 4303 -44 4 594 597 117 9 19 chr3LHet 1179761 1179866 -1375625 + Gypsy8_LTR LTR Gypsy 72 175 -129 4 594 905 85 0 0 chr3LHet 1180167 1180285 -1375206 - CIRCE LINE Composite -2102 4254 4137 4 594 352 148 0 0 chr3LHet 1180330 1180384 -1375107 - CIRCE LINE Composite -2219 4137 4084 4 594 494 311 49 11 chr3LHet 1180398 1180665 -1374826 + OSVALDO_I LTR Gypsy 2447 2723 -3930 4 594 2602 91 0 46 chr3LHet 1180667 1181060 -1374431 + Gypsy8_I LTR Gypsy 1074 1448 -2899 4 594 25 65 0 0 chr3LHet 1181758 1181804 -1373687 + AT_rich Low_complexity Low_complexity 1 46 0 4 594 265 299 0 33 chr3LHet 1181905 1181995 -1373496 + DMCR1A LINE CR1 3832 3918 -552 4 594 616 111 11 0 chr3LHet 1182078 1182168 -1373323 + DM176_LTR LTR Gypsy 130 220 -287 4 594 349 162 27 0 chr3LHet 1182165 1182239 -1373252 + DM297_LTR LTR Gypsy 190 265 -149 4 594 1498 39 0 6 chr3LHet 1182245 1182425 -1373066 + PROTOP_B DNA P 8 186 -967 4 594 45 0 0 0 chr3LHet 1182829 1182874 -1372617 + AT_rich Low_complexity Low_complexity 1 45 0 4 594 24 0 0 0 chr3LHet 1183280 1183304 -1372187 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 439 330 34 39 chr3LHet 1183484 1184012 -1371479 + Gypsy3_I LTR Gypsy 846 1784 -5228 4 594 23 0 0 0 chr3LHet 1184807 1184830 -1370661 + AT_rich Low_complexity Low_complexity 1 23 0 4 594 1973 153 6 8 chr3LHet 1184917 1185324 -1370167 + Gypsy8_I LTR Gypsy 1503 1831 -2516 4 594 1610 37 11 0 chr3LHet 1185325 1185516 -1369975 + Gypsy6A_LTR LTR Gypsy 212 404 -16 4 594 416 181 12 0 chr3LHet 1185808 1185891 -1369600 + Gypsy_LTR LTR Gypsy 1 84 -398 4 594 8472 28 40 48 chr3LHet 1185891 1187005 -1368486 - PROTOP_A DNA P 0 1105 1 4 594 5992 18 0 0 chr3LHet 1187035 1187714 -1367777 - PROTOP DNA P 0 4480 3802 4 594 6558 30 22 6 chr3LHet 1187709 1188519 -1366972 - PROTOP DNA P -3657 823 1 4 594 1304 199 10 24 chr3LHet 1188521 1188814 -1366677 + Gypsy_LTR LTR Gypsy 102 390 -92 4 594 497 224 109 23 chr3LHet 1188956 1189130 -1366361 - I_DM LINE I -3292 2939 2751 4 594 230 131 48 32 chr3LHet 1189117 1189178 -1366313 - I_DM LINE I -4246 1985 1924 4 594 1631 145 75 10 chr3LHet 1189178 1189471 -1366020 - DNAREP1_DM LINE Penelope 0 594 283 4 594 2030 146 255 18 chr3LHet 1190325 1190713 -1364778 + DMCR1A LINE CR1 2930 3409 -1061 4 594 697 163 170 0 chr3LHet 1190738 1190885 -1364606 + DMCR1A LINE CR1 4284 4455 -15 4 594 364 300 0 0 chr3LHet 1191687 1191777 -1363714 + Gypsy8_I LTR Gypsy 1035 1124 -3223 4 594 422 353 75 0 chr3LHet 1191828 1192069 -1363422 + OSVALDO_I LTR Gypsy 3608 3866 -2787 4 594 309 265 57 29 chr3LHet 1192467 1192572 -1362919 - MDG1_I LTR Gypsy -6322 274 184 4 594 531 162 442 25 chr3LHet 1192573 1192766 -1362725 - DNAREP1_DM LINE Penelope -106 488 228 4 594 294 208 110 40 chr3LHet 1192941 1193041 -1362450 - Gypsy2_LTR LTR Gypsy -150 203 97 4 594 9902 222 43 36 chr3LHet 1193140 1195618 -1359873 - Gypsy2_I LTR Gypsy -250 5885 3434 4 594 5895 287 39 19 chr3LHet 1195631 1197678 -1357813 - Gypsy6_I LTR Gypsy -3568 3444 1357 4 594 817 171 148 121 chr3LHet 1197743 1198108 -1357383 - TIRANT_LTR LTR Gypsy -42 375 1 4 594 34635 190 22 8 chr3LHet 1198108 1204308 -1351183 - TIRANT_I LTR Gypsy 0 7692 1401 4 594 204 270 13 13 chr3LHet 1204366 1204441 -1351050 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 594 22 0 0 0 chr3LHet 1204514 1204536 -1350955 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 876 280 36 43 chr3LHet 1204625 1204927 -1350564 - TIRANT_I LTR Gypsy -6342 1350 1051 4 594 251 135 143 86 chr3LHet 1204968 1205073 -1350418 - TIRANT_I LTR Gypsy -6748 944 834 4 594 319 343 73 32 chr3LHet 1205191 1205507 -1349984 - TIRANT_I LTR Gypsy -6748 944 616 4 594 2421 22 0 0 chr3LHet 1205530 1205806 -1349685 - DOC2_DM LINE Jockey -34 4759 4484 4 594 1490 22 54 16 chr3LHet 1205813 1205997 -1349494 - DOC2_DM LINE Jockey -982 3811 3621 4 594 7762 11 16 0 chr3LHet 1205985 1206863 -1348628 - DOC2_DM LINE Jockey -2223 2570 1679 4 594 318 0 0 0 chr3LHet 1206862 1206899 -1348592 - DOC2_DM LINE Jockey -3816 977 941 4 594 406 225 103 82 chr3LHet 1206892 1207076 -1348415 - TIRANT_I LTR Gypsy -7504 188 1 4 594 273 224 81 75 chr3LHet 1207147 1207321 -1348170 - TIRANT_LTR LTR Gypsy -42 375 201 4 594 729 301 31 31 chr3LHet 1207400 1207654 -1347837 - Gypsy2_I LTR Gypsy -4838 1297 1044 4 594 711 187 118 89 chr3LHet 1207691 1207961 -1347530 - Gypsy2_I LTR Gypsy -5566 569 292 4 594 806 156 85 53 chr3LHet 1208186 1208375 -1347116 - Gypsy2_LTR LTR Gypsy -150 203 9 4 594 4604 59 48 8 chr3LHet 1208705 1209304 -1346187 + Baggins1 LINE LOA 3987 4609 -844 4 594 5177 33 85 0 chr3LHet 1209302 1209940 -1345551 + Baggins1 LINE LOA 4752 5443 -10 4 594 254 38 57 19 chr3LHet 1209940 1209993 -1345498 + (TAA)n Simple_repeat Simple_repeat 1 55 0 4 594 24 32 0 0 chr3LHet 1210920 1210951 -1344540 + AT_rich Low_complexity Low_complexity 1 31 0 4 594 482 297 45 21 chr3LHet 1210951 1211214 -1344277 - Gypsy4_I LTR Gypsy -2921 3500 3232 4 594 470 216 39 31 chr3LHet 1211207 1211336 -1344155 - Gypsy4_I LTR Gypsy -3628 2660 2531 4 594 7600 43 3 0 chr3LHet 1211336 1212232 -1343259 - FW2_DM LINE Jockey -46 3915 3017 4 594 1029 42 0 0 chr3LHet 1212232 1212351 -1343140 - FW2_DM LINE Jockey -2584 1377 1259 4 594 3730 28 5 0 chr3LHet 1212351 1212777 -1342714 - ROO_LTR LTR Pao 0 428 1 4 594 42806 22 35 1 chr3LHet 1212777 1219385 -1336106 - ROO_I LTR Pao 0 8256 1426 4 594 3637 41 121 63 chr3LHet 1219379 1219950 -1335541 - ROO_I LTR Pao -7096 1160 557 4 594 2277 52 15 52 chr3LHet 1219933 1220259 -1335232 - ROO_I LTR Pao -7942 314 1 4 594 3498 29 39 0 chr3LHet 1220259 1220671 -1334820 - ROO_LTR LTR Pao 0 428 1 4 594 4961 29 92 0 chr3LHet 1220671 1221283 -1334208 - FW2_DM LINE Jockey -2698 1263 596 4 594 920 57 167 0 chr3LHet 1221283 1221518 -1333973 - FW2_DM LINE Jockey -3560 401 128 4 594 25 65 0 0 chr3LHet 1221712 1221758 -1333733 + AT_rich Low_complexity Low_complexity 1 46 0 4 594 282 328 11 20 chr3LHet 1222867 1223103 -1332388 - Gypsy4_I LTR Gypsy -5289 999 846 4 594 24 53 0 0 chr3LHet 1223475 1223513 -1331978 + AT_rich Low_complexity Low_complexity 1 38 0 4 594 43 26 0 50 chr3LHet 1223997 1224077 -1331414 + AT_rich Low_complexity Low_complexity 1 76 0 4 594 1316 103 0 5 chr3LHet 1224627 1224813 -1330678 - PROTOP_B DNA P -968 185 1 4 594 384 176 39 23 chr3LHet 1225405 1225533 -1329958 + PROTOP DNA P 1696 1825 -2655 4 594 33 56 0 0 chr3LHet 1225613 1225667 -1329824 + AT_rich Low_complexity Low_complexity 1 54 0 4 594 324 68 186 0 chr3LHet 1225667 1225726 -1329765 + DNAREP1_DM LINE Penelope 233 302 -292 4 594 1581 155 7 3 chr3LHet 1227064 1227356 -1328135 + DNAREP1_DM LINE Penelope 1 293 -301 4 594 1582 139 92 75 chr3LHet 1227379 1228074 -1327417 + DNAREP1_DM LINE Penelope 1 592 -2 4 594 2619 156 127 32 chr3LHet 1228080 1228696 -1326795 + Mariner2_DM DNA Tc1 2 675 -237 4 594 22 0 0 0 chr3LHet 1228725 1228747 -1326744 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 431 191 35 97 chr3LHet 1229052 1229197 -1326294 + Stalker2_I LTR Gypsy 3920 4055 -3347 4 594 239 248 257 0 chr3LHet 1229190 1229295 -1326196 + DM412 LTR Gypsy 4155 4286 -2611 4 594 650 280 164 28 chr3LHet 1230187 1230474 -1325017 - DIVER2_I LTR Pao -355 3792 3467 4 594 1217 172 108 68 chr3LHet 1230513 1230838 -1324653 + G7_DM LINE Jockey 498 835 -357 4 594 3294 41 0 3 chr3LHet 1230838 1231230 -1324261 - Gypsy6A_LTR LTR Gypsy 0 420 30 4 594 227 54 0 51 chr3LHet 1231230 1231269 -1324222 + G7_DM LINE Jockey 932 968 -224 4 594 1299 144 45 0 chr3LHet 1231269 1231491 -1324000 - HOBO DNA hAT 0 3016 2785 4 594 868 67 0 49 chr3LHet 1231495 1231637 -1323854 - PROTOP_B DNA P -706 447 313 4 594 233 29 0 29 chr3LHet 1231640 1231675 -1323816 + (TAA)n Simple_repeat Simple_repeat 3 36 0 4 594 832 49 0 47 chr3LHet 1231685 1231813 -1323678 - PROTOP_B DNA P -719 434 313 4 594 233 29 0 29 chr3LHet 1231816 1231851 -1323640 + (TAA)n Simple_repeat Simple_repeat 3 36 0 4 594 339 43 0 0 chr3LHet 1231852 1231898 -1323593 + PROTOP_B DNA P 313 358 -795 4 594 199 0 65 0 chr3LHet 1231898 1231929 -1323562 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 594 809 87 0 23 chr3LHet 1231942 1232072 -1323419 - PROTOP_B DNA P -714 439 313 4 594 412 32 0 87 chr3LHet 1232106 1232175 -1323316 + PROTOP_B DNA P 317 379 -774 4 594 311 60 78 29 chr3LHet 1232178 1232281 -1323210 + (TATAA)n Simple_repeat Simple_repeat 5 112 0 4 594 684 126 413 0 chr3LHet 1232282 1232437 -1323054 - PROTOP_B DNA P -918 235 17 4 594 1577 121 29 123 chr3LHet 1232438 1232787 -1322704 - HOBO DNA hAT -2700 316 1 4 594 1134 132 17 52 chr3LHet 1232787 1233017 -1322474 + G7_DM LINE Jockey 961 1182 -10 4 594 294 290 0 0 chr3LHet 1233034 1233103 -1322388 - DIVER2_I LTR Pao -761 3386 3318 4 594 25 0 0 0 chr3LHet 1233656 1233681 -1321810 + AT_rich Low_complexity Low_complexity 1 25 0 4 594 34 42 0 0 chr3LHet 1233917 1233965 -1321526 + AT_rich Low_complexity Low_complexity 1 48 0 4 594 37 39 0 0 chr3LHet 1234131 1234182 -1321309 + AT_rich Low_complexity Low_complexity 1 51 0 4 594 774 342 8 51 chr3LHet 1234304 1234794 -1320697 + HMSBEAGLE_I LTR Gypsy 1729 2197 -4332 4 594 351 261 0 11 chr3LHet 1235283 1235372 -1320119 + HMSBEAGLE_I LTR Gypsy 2646 2733 -3796 4 594 5443 283 72 14 chr3LHet 1235637 1237729 -1317762 + HMSBEAGLE_I LTR Gypsy 3129 5341 -1188 4 594 3616 17 0 0 chr3LHet 1237746 1238153 -1317338 + Gypsy6_LTR LTR Gypsy 1 407 0 4 594 267 0 22 44 chr3LHet 1238153 1238198 -1317293 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 594 4500 33 19 3 chr3LHet 1238198 1238768 -1316723 + IDEFIX_LTR LTR Gypsy 1 579 -15 4 594 2315 18 3 36 chr3LHet 1238770 1239085 -1316406 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 594 10882 4 0 72 chr3LHet 1239085 1240539 -1314952 + ROVER-I_DM LTR Gypsy 1 1349 -5235 4 594 30867 55 4 4 chr3LHet 1240538 1245419 -1310072 + ROVER-I_DM LTR Gypsy 1775 6584 0 4 594 2253 28 3 39 chr3LHet 1245419 1245734 -1309757 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 594 24 0 0 0 chr3LHet 1245950 1245974 -1309517 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 5776 32 1 1 chr3LHet 1246287 1247001 -1308490 + IDEFIX_I LTR Gypsy 1 714 -4914 4 594 34507 46 9 2 chr3LHet 1247002 1251408 -1304083 + IDEFIX_I LTR Gypsy 1192 5628 0 4 594 4655 39 5 2 chr3LHet 1251408 1252000 -1303491 + IDEFIX_LTR LTR Gypsy 1 594 0 4 594 32 0 0 0 chr3LHet 1252000 1252032 -1303459 + AT_rich Low_complexity Low_complexity 1 32 0 4 594 329 239 0 0 chr3LHet 1253461 1253528 -1301963 + HMSBEAGLE_I LTR Gypsy 6463 6529 0 4 594 1594 136 73 7 chr3LHet 1254490 1254793 -1300698 + DNAREP1_DM LINE Penelope 10 332 -262 4 594 1202 113 233 24 chr3LHet 1255622 1255875 -1299616 - DMCR1A LINE CR1 -3542 928 623 4 594 1581 144 144 123 chr3LHet 1255959 1256481 -1299010 - DNAREP1_DM LINE Penelope -60 534 2 4 594 285 73 0 0 chr3LHet 1256476 1256517 -1298974 - DNAREP1_DM LINE Penelope -345 249 209 4 594 29 70 0 0 chr3LHet 1257170 1257227 -1298264 + AT_rich Low_complexity Low_complexity 1 57 0 4 594 6399 30 21 6 chr3LHet 1257242 1258053 -1297438 + PROTOP DNA P 1 823 -3657 4 594 5793 19 0 0 chr3LHet 1258048 1258727 -1296764 + PROTOP DNA P 3802 4480 0 4 594 341 143 16 0 chr3LHet 1258735 1258798 -1296693 + DNAREP1_DM LINE Penelope 531 594 0 4 594 541 195 90 39 chr3LHet 1259312 1259467 -1296024 + CIRCE LINE Composite 4138 4300 -2056 4 594 25 51 0 0 chr3LHet 1259473 1259512 -1295979 + AT_rich Low_complexity Low_complexity 1 39 0 4 594 3870 65 48 6 chr3LHet 1259526 1260049 -1295442 - G5A_DM LINE Jockey -24 2817 2273 4 594 267 157 20 0 chr3LHet 1260057 1260108 -1295383 + CIRCE LINE Composite 4292 4343 -2013 4 594 1088 207 36 22 chr3LHet 1260220 1260496 -1294995 - Gypsy6A_LTR LTR Gypsy -29 391 112 4 594 29 94 0 0 chr3LHet 1261056 1261141 -1294350 + AT_rich Low_complexity Low_complexity 1 85 0 4 594 6235 315 45 24 chr3LHet 1261640 1264588 -1290903 + Gypsy4_I LTR Gypsy 674 3683 -2605 4 594 1648 299 33 8 chr3LHet 1264657 1265285 -1290206 + Gypsy4_I LTR Gypsy 4101 4744 -1544 4 594 497 289 56 21 chr3LHet 1265533 1265819 -1289672 + Gypsy4_I LTR Gypsy 5103 5398 -890 4 594 3158 55 8 10 chr3LHet 1265840 1266259 -1289232 - STALKER4_LTR LTR Gypsy -23 379 1 4 594 275 75 25 0 chr3LHet 1266841 1266881 -1288610 - Gypsy6A_LTR LTR Gypsy -379 41 1 4 594 627 330 61 70 chr3LHet 1266910 1267513 -1287978 - Gypsy3_I LTR Gypsy -1 6176 5579 4 594 810 25 271 0 chr3LHet 1267537 1267655 -1287836 - DMCR1A LINE CR1 -2100 2370 2221 4 594 1223 102 6 0 chr3LHet 1267653 1267829 -1287662 - DMCR1A LINE CR1 -2631 1839 1663 4 594 2060 68 11 7 chr3LHet 1267821 1268102 -1287389 - DMCR1A LINE CR1 -3100 1370 1089 4 594 2238 130 100 18 chr3LHet 1268371 1268889 -1286602 - DNAREP1_DM LINE Penelope -29 565 89 4 594 290 335 17 17 chr3LHet 1268947 1269126 -1286365 + DMRT1C LINE R1 36 214 -5229 4 594 280 350 34 29 chr3LHet 1269153 1269359 -1286132 + DMRT1C LINE R1 40 246 -5197 4 594 268 270 137 7 chr3LHet 1269412 1269565 -1285926 + DMRT1C LINE R1 375 547 -4896 4 594 464 256 104 8 chr3LHet 1269836 1270076 -1285415 + M4DM DNA Transib 910 1172 -263 4 594 394 91 0 0 chr3LHet 1270815 1270870 -1284621 + DNAREP1_DM LINE Penelope 540 594 0 4 594 454 153 319 0 chr3LHet 1270866 1271010 -1284481 + DMRT1C LINE R1 791 980 -4463 4 594 471 153 0 12 chr3LHet 1271008 1271094 -1284397 + DMRT1C LINE R1 1800 1884 -3559 4 594 1982 124 91 0 chr3LHet 1271082 1271412 -1284079 + DMRT1C LINE R1 2206 2565 -2878 4 594 741 127 148 0 chr3LHet 1271460 1271602 -1283889 + DMRT1C LINE R1 2794 2956 -2487 4 594 225 73 0 211 chr3LHet 1271707 1271759 -1283732 + Gypsy8_LTR LTR Gypsy 232 272 -32 4 594 281 297 66 18 chr3LHet 1271875 1272101 -1283390 - QUASIMODO_I LTR Gypsy 0 6060 5824 4 594 3115 280 37 18 chr3LHet 1272129 1273505 -1281986 - QUASIMODO_I LTR Gypsy -306 5754 4353 4 594 4301 251 24 12 chr3LHet 1273533 1274891 -1280600 - QUASIMODO_I LTR Gypsy -1824 4236 2862 4 594 2997 256 17 18 chr3LHet 1274890 1276020 -1279471 - QUASIMODO_I LTR Gypsy -3378 2682 1512 4 594 9304 57 15 5 chr3LHet 1276046 1277327 -1278164 + I_DM LINE I 100 1393 -4838 4 594 1681 25 0 24 chr3LHet 1277329 1277537 -1277954 + FROGGER_LTR LTR Copia 1 203 0 4 594 1122 37 0 0 chr3LHet 1277537 1277673 -1277818 + FROGGER_I LTR Copia 1 136 -1941 4 594 180 0 0 0 chr3LHet 1277678 1277698 -1277793 + (A)n Simple_repeat Simple_repeat 1 20 0 4 594 228 321 0 28 chr3LHet 1278125 1278234 -1277257 + Copia2_I LTR Copia 567 672 -3490 4 594 3911 25 4 4 chr3LHet 1279110 1279592 -1275899 - Gypsy_LTR LTR Gypsy 0 482 1 4 594 56394 7 1 0 chr3LHet 1279592 1286095 -1269396 - Gypsy_I LTR Gypsy 0 6507 1 4 594 3911 25 4 4 chr3LHet 1286093 1286575 -1268916 - Gypsy_LTR LTR Gypsy 0 482 1 4 594 14489 25 1 13 chr3LHet 1287141 1288951 -1266540 + FROGGER_I LTR Copia 289 2077 0 4 594 1698 15 0 0 chr3LHet 1288951 1289154 -1266337 + FROGGER_LTR LTR Copia 1 203 0 4 594 4150 70 32 27 chr3LHet 1289154 1289847 -1265644 + I_DM LINE I 1389 2084 -4147 4 594 253 0 0 0 chr3LHet 1289857 1289892 -1265599 + I_DM LINE I 2143 2177 -4054 4 594 17371 68 11 19 chr3LHet 1289898 1292505 -1262986 + I_DM LINE I 2869 5456 -775 4 594 231 254 0 0 chr3LHet 1292530 1292601 -1262890 - QUASIMODO_I LTR Gypsy -4559 1501 1431 4 594 1425 48 0 0 chr3LHet 1292624 1292810 -1262681 + LOOPER1_DM DNA PiggyBac 1 186 -1695 4 594 1324 52 0 0 chr3LHet 1293278 1293469 -1262022 + LOOPER1_DM DNA PiggyBac 186 376 -1505 4 594 3888 36 147 13 chr3LHet 1293468 1294163 -1261328 + LOOPER1_DM DNA PiggyBac 720 1507 -374 4 594 2338 53 40 20 chr3LHet 1294768 1295115 -1260376 + LOOPER1_DM DNA PiggyBac 1527 1880 -1 4 594 282 273 35 35 chr3LHet 1295145 1295316 -1260175 - QUASIMODO_I LTR Gypsy -4686 1374 1204 4 594 754 316 41 36 chr3LHet 1295479 1296090 -1259401 - QUASIMODO_I LTR Gypsy -5068 992 379 4 594 28 0 0 0 chr3LHet 1296863 1296891 -1258600 + AT_rich Low_complexity Low_complexity 1 28 0 4 594 237 247 36 24 chr3LHet 1296971 1297054 -1258437 + TV1I LTR Gypsy 3678 3761 -2202 4 594 1149 39 123 0 chr3LHet 1297085 1297239 -1258252 - Baggins1 LINE LOA 0 5453 5281 4 594 353 253 22 17 chr3LHet 1297260 1297441 -1258050 + IDEFIX_I LTR Gypsy 3576 3757 -1871 4 594 192 77 0 0 chr3LHet 1297450 1297476 -1258015 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 594 3237 39 29 0 chr3LHet 1297512 1297928 -1257563 - ROO_LTR LTR Pao 0 428 1 4 594 6194 25 0 1 chr3LHet 1297928 1298714 -1256777 - ROO_I LTR Pao 0 8256 7472 4 594 47601 18 7 5 chr3LHet 1298711 1304615 -1250876 - ROO_I LTR Pao -2336 5920 1 4 594 3261 39 29 0 chr3LHet 1304615 1305031 -1250460 - ROO_LTR LTR Pao 0 428 1 4 594 290 256 0 0 chr3LHet 1305067 1305149 -1250342 + QUASIMODO_I LTR Gypsy 4250 4331 -1729 4 594 823 201 8 38 chr3LHet 1305224 1305462 -1250029 + DNAREP1_DM LINE Penelope 72 302 -292 4 594 574 110 37 108 chr3LHet 1305437 1305646 -1249845 + DNAREP1_DM LINE Penelope 117 312 -282 4 594 759 161 30 24 chr3LHet 1305646 1305811 -1249680 + DNAREP1_DM LINE Penelope 1 166 -428 4 594 685 95 335 23 chr3LHet 1305896 1306078 -1249413 + DNAREP1_DM LINE Penelope 356 594 0 4 594 798 232 23 27 chr3LHet 1306081 1306302 -1249189 + DNAREP1_DM LINE Penelope 270 489 -105 4 594 313 222 43 43 chr3LHet 1306452 1306546 -1248945 + R1_DM LINE R1 4596 4689 -667 4 594 414 301 43 0 chr3LHet 1307440 1307603 -1247888 - BURDOCK_I LTR Gypsy -1261 4599 4430 4 594 2958 91 158 0 chr3LHet 1307608 1308217 -1247274 + PROTOP DNA P 1 707 -3773 4 594 283 152 0 57 chr3LHet 1308218 1308288 -1247203 + PROTOP DNA P 1009 1074 -3406 4 594 3271 74 49 25 chr3LHet 1308294 1308877 -1246614 + PROTOP_B DNA P 669 1153 0 4 594 26 30 0 0 chr3LHet 1309225 1309258 -1246233 + AT_rich Low_complexity Low_complexity 1 33 0 4 594 692 303 22 28 chr3LHet 1309791 1310265 -1245226 - Gypsy4_I LTR Gypsy -470 5818 5411 4 74 4379 45 45 0 chr3LHet 1310277 1310860 -1244631 + DOC3_DM LINE Jockey 2677 3285 -1455 4 595 8403 42 87 2 chr3LHet 1310845 1312000 -1243491 + DOC3_DM LINE Jockey 3395 4648 -92 4 595 579 170 692 29 chr3LHet 1312053 1312397 -1243094 + DMCR1A LINE CR1 110 682 -3788 4 595 1405 169 0 0 chr3LHet 1312417 1312660 -1242831 + DMCR1A LINE CR1 1659 1901 -2569 4 595 687 183 320 4 chr3LHet 1312666 1312913 -1242578 + DMCR1A LINE CR1 2135 2459 -2011 4 595 232 39 569 0 chr3LHet 1312914 1312965 -1242526 + DMCR1A LINE CR1 809 888 -3582 4 595 428 95 0 0 chr3LHet 1312980 1313043 -1242448 + DMCR1A LINE CR1 1275 1337 -3133 4 595 895 76 8 0 chr3LHet 1313040 1313172 -1242319 + DMCR1A LINE CR1 1707 1839 -2631 4 595 3794 51 0 0 chr3LHet 1313170 1313662 -1241829 + DMCR1A LINE CR1 2221 2712 -1758 4 595 1383 109 124 3 chr3LHet 1313857 1314197 -1241294 + DNAREP1_DM LINE Penelope 1 381 -213 4 595 2033 95 72 6 chr3LHet 1314253 1314602 -1240889 - STALKER4_LTR LTR Gypsy -29 373 2 4 595 1292 103 69 0 chr3LHet 1314602 1314803 -1240688 + DNAREP1_DM LINE Penelope 380 594 0 4 595 1135 138 233 24 chr3LHet 1314801 1315167 -1240324 + DNAREP1_DM LINE Penelope 2 444 -150 4 595 353 152 245 21 chr3LHet 1316258 1316352 -1239139 + DNAREP1_DM LINE Penelope 2 116 -478 4 595 490 343 22 9 chr3LHet 1316681 1317002 -1238489 - DIVER2_I LTR Pao -104 4043 3719 4 595 305 322 108 25 chr3LHet 1317198 1317402 -1238089 - DIVER2_I LTR Pao -902 3245 3025 4 595 547 345 26 21 chr3LHet 1318754 1319177 -1236314 - DIVER2_I LTR Pao -1758 2389 1965 4 595 1835 119 158 49 chr3LHet 1319546 1319951 -1235540 - G3_DM LINE Jockey -4026 579 131 4 595 3591 244 121 25 chr3LHet 1320046 1322178 -1233313 - DOC4_DM LINE Jockey -637 4103 2081 4 595 852 165 33 0 chr3LHet 1322193 1322395 -1233096 - DOC4_DM LINE Jockey -914 1877 1735 4 595 295 366 19 12 chr3LHet 1322798 1323055 -1232436 - DIVER2_I LTR Pao -170 3977 3719 4 595 264 342 25 25 chr3LHet 1323296 1323455 -1232036 - DIVER2_I LTR Pao -964 3183 3025 4 595 582 345 77 31 chr3LHet 1324811 1325574 -1229917 - DIVER2_I LTR Pao -1758 2389 1592 4 595 5856 55 148 8 chr3LHet 1325607 1326531 -1228960 + DMCR1A LINE CR1 1590 2643 -1827 4 595 3933 75 23 2 chr3LHet 1326532 1327107 -1228384 + DMCR1A LINE CR1 2875 3461 -1009 4 595 12384 47 24 8 chr3LHet 1327107 1328814 -1226677 + S2_DM DNA Tc1 1 1735 0 4 595 1350 56 94 0 chr3LHet 1328814 1329154 -1226337 + DMCR1A LINE CR1 3460 3831 -639 4 595 2317 64 128 18 chr3LHet 1329140 1329524 -1225967 + DMCR1A LINE CR1 4043 4468 -2 4 595 314 130 0 42 chr3LHet 1329814 1329886 -1225605 - DOC LINE Jockey -33 4692 4624 4 595 222 100 15 91 chr3LHet 1330694 1330760 -1224731 + (TATAA)n Simple_repeat Simple_repeat 4 64 0 4 595 28 48 0 0 chr3LHet 1331030 1331072 -1224419 + AT_rich Low_complexity Low_complexity 1 42 0 4 595 230 119 0 0 chr3LHet 1331101 1331143 -1224348 - Transib5 DNA Transib -2709 292 251 4 595 3374 205 152 34 chr3LHet 1331392 1332797 -1222694 - DOC4_DM LINE Jockey -767 3973 2081 4 595 258 222 56 0 chr3LHet 1332954 1333008 -1222483 - DOC2_DM LINE Jockey -2207 2586 2530 4 595 1031 204 85 0 chr3LHet 1332995 1333351 -1222140 - DOC4_DM LINE Jockey -2357 2436 1871 4 595 4481 63 74 9 chr3LHet 1333352 1333997 -1221494 - DOC4_DM LINE Jockey -1175 1616 930 4 595 2270 74 85 40 chr3LHet 1334030 1334610 -1220881 - DOC4_DM LINE Jockey -1981 810 1 4 595 22 0 0 0 chr3LHet 1335299 1335321 -1220170 + AT_rich Low_complexity Low_complexity 1 22 0 4 595 474 35 0 0 chr3LHet 1335411 1335468 -1220023 - G3_DM LINE Jockey -4548 57 1 4 595 997 207 88 4 chr3LHet 1335706 1335944 -1219547 - Gypsy2_LTR LTR Gypsy -86 267 10 4 595 3154 100 23 19 chr3LHet 1335931 1336408 -1219083 - Gypsy2_I LTR Gypsy -523 5612 5134 4 595 440 139 12 25 chr3LHet 1336399 1336480 -1219011 - Gypsy2_I LTR Gypsy -1419 4716 4637 4 595 361 82 0 0 chr3LHet 1336496 1336545 -1218946 - Gypsy2_I LTR Gypsy -1797 4338 4290 4 595 961 81 0 0 chr3LHet 1336556 1336680 -1218811 - Gypsy2_I LTR Gypsy -2072 4063 3940 4 595 367 23 0 0 chr3LHet 1336920 1336964 -1218527 + G4_DM LINE Jockey 1 44 -3812 4 595 13848 41 19 1 chr3LHet 1336962 1338691 -1216800 + G4_DM LINE Jockey 2097 3856 0 4 595 11822 146 29 2 chr3LHet 1338704 1340931 -1214560 - Gypsy2_I LTR Gypsy -2785 4737 1713 4 595 12395 42 11 1 chr3LHet 1340930 1342611 -1212880 + DMCR1A LINE CR1 2742 4470 0 4 595 501 189 0 0 chr3LHet 1342826 1342916 -1212575 - Gypsy2_I LTR Gypsy -5815 320 231 4 595 337 107 107 0 chr3LHet 1342952 1343008 -1212483 - Gypsy2_I LTR Gypsy -6073 62 1 4 595 283 136 17 17 chr3LHet 1343160 1343220 -1212271 - Gypsy2_LTR LTR Gypsy -153 200 141 4 595 341 94 0 0 chr3LHet 1343530 1343583 -1211908 + DNAREP1_DM LINE Penelope 122 174 -420 4 595 685 186 78 10 chr3LHet 1343609 1343815 -1211676 + DNAREP1_DM LINE Penelope 137 356 -238 4 595 236 154 0 0 chr3LHet 1343818 1343857 -1211634 + DNAREP1_DM LINE Penelope 510 548 -46 4 595 21 0 0 0 chr3LHet 1343955 1343976 -1211515 + AT_rich Low_complexity Low_complexity 1 21 0 4 595 25 31 0 0 chr3LHet 1344354 1344386 -1211105 + AT_rich Low_complexity Low_complexity 1 32 0 4 595 353 127 0 0 chr3LHet 1344430 1344485 -1211006 - DNAREP1_DM LINE Penelope 0 594 540 4 595 2523 118 31 0 chr3LHet 1344492 1344875 -1210616 + Gypsy12A_LTR LTR Gypsy 1 395 -1885 4 595 477 91 0 13 chr3LHet 1344950 1345028 -1210463 - Gypsy12A_LTR LTR Gypsy -175 2105 2029 4 595 4432 295 46 37 chr3LHet 1345026 1347417 -1208074 - ROVER-I_DM LTR Gypsy -2658 3926 1515 4 595 646 96 21 0 chr3LHet 1347442 1347536 -1207955 + Gypsy12A_LTR LTR Gypsy 300 395 -1885 4 595 726 113 0 9 chr3LHet 1347611 1347727 -1207764 - Gypsy12A_LTR LTR Gypsy -175 2105 1991 4 595 371 153 0 53 chr3LHet 1347723 1347799 -1207692 + Gypsy12A_LTR LTR Gypsy 1960 2031 -249 4 595 1062 116 171 34 chr3LHet 1347795 1348000 -1207491 + Gypsy12A_LTR LTR Gypsy 420 652 -1628 4 595 1792 150 82 50 chr3LHet 1348045 1348507 -1206984 + Gypsy12A_LTR LTR Gypsy 759 1235 -1045 4 595 4335 160 199 2 chr3LHet 1348639 1349702 -1205789 + DMRT1B LINE R1 1693 2964 -2219 4 595 6480 119 99 0 chr3LHet 1349701 1350766 -1204725 + DMRT1B LINE R1 4011 5181 -2 4 595 660 196 74 70 chr3LHet 1351005 1351290 -1204201 - DNAREP1_DM LINE Penelope -287 307 22 4 595 32 98 0 0 chr3LHet 1351303 1351405 -1204086 + AT_rich Low_complexity Low_complexity 1 102 0 4 595 25 0 0 0 chr3LHet 1351488 1351513 -1203978 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 25 0 0 0 chr3LHet 1351587 1351612 -1203879 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 24 67 0 0 chr3LHet 1352662 1352707 -1202784 + AT_rich Low_complexity Low_complexity 1 45 0 4 595 1422 128 122 24 chr3LHet 1352873 1353161 -1202330 + DNAREP1_DM LINE Penelope 1 316 -278 4 595 449 111 14 0 chr3LHet 1353175 1353247 -1202244 + DNAREP1_DM LINE Penelope 254 326 -268 4 595 26 0 0 0 chr3LHet 1353791 1353817 -1201674 + AT_rich Low_complexity Low_complexity 1 26 0 4 595 423 235 115 46 chr3LHet 1354220 1354394 -1201097 + Stalker2_I LTR Gypsy 3869 4054 -3348 4 595 638 216 139 13 chr3LHet 1354408 1354638 -1200853 + DM412 LTR Gypsy 4206 4464 -2433 4 595 235 191 0 0 chr3LHet 1354663 1354710 -1200781 - DNAREP1_DM LINE Penelope -109 485 439 4 595 616 175 301 20 chr3LHet 1354973 1355222 -1200269 + DMCR1A LINE CR1 1241 1559 -2911 4 595 254 160 0 20 chr3LHet 1355917 1355968 -1199523 + Gypsy8_LTR LTR Gypsy 1 50 -254 4 595 294 156 46 15 chr3LHet 1356024 1356089 -1199402 + NINJA_LTR LTR Pao 116 182 -135 4 595 240 179 0 0 chr3LHet 1356361 1356400 -1199091 - Invader6_LTR LTR Gypsy -188 205 167 4 595 257 191 46 31 chr3LHet 1356572 1356637 -1198854 - Invader1_I LTR Gypsy 0 3186 3121 4 595 1083 271 145 32 chr3LHet 1357265 1357896 -1197595 - Invader6_I LTR Gypsy -2017 2082 1381 4 595 938 325 56 5 chr3LHet 1357930 1358356 -1197135 - Invader6_I LTR Gypsy -2904 1195 748 4 595 806 320 100 24 chr3LHet 1358445 1358986 -1196505 - Invader6_I LTR Gypsy -3479 620 39 4 595 1535 73 9 40 chr3LHet 1359358 1359585 -1195906 + PROTOP DNA P 1 221 -4259 4 595 666 116 50 8 chr3LHet 1360226 1360394 -1195097 + DNAREP1_DM LINE Penelope 135 332 -262 4 595 264 118 169 42 chr3LHet 1360447 1360518 -1194973 + DNAREP1_DM LINE Penelope 515 594 0 4 595 29 28 0 0 chr3LHet 1360893 1360929 -1194562 + AT_rich Low_complexity Low_complexity 1 36 0 4 595 1621 132 76 9 chr3LHet 1361081 1361499 -1193992 + DNAREP1_DM LINE Penelope 1 324 -270 4 595 235 132 19 19 chr3LHet 1361506 1361560 -1193931 + DNAREP1_DM LINE Penelope 239 292 -302 4 595 337 71 250 0 chr3LHet 1361571 1361627 -1193864 + DNAREP1_DM LINE Penelope 466 535 -59 4 595 1218 245 115 44 chr3LHet 1361625 1362103 -1193388 - Invader6_I LTR Gypsy -2111 1988 1477 4 595 6710 142 70 44 chr3LHet 1362139 1363400 -1192091 + DMRT1B LINE R1 3880 5173 -10 4 595 3649 57 92 8 chr3LHet 1363577 1364108 -1191383 + PROTOP DNA P 1 576 -3904 4 595 12335 29 18 8 chr3LHet 1364098 1365623 -1189868 + PROTOP DNA P 2215 3754 -726 4 595 2151 39 100 0 chr3LHet 1365638 1365919 -1189572 + PROTOP DNA P 4172 4480 0 4 595 3947 168 30 19 chr3LHet 1366008 1366821 -1188670 - Invader3_I LTR Gypsy -1 4887 4066 4 595 1249 158 188 6 chr3LHet 1366829 1367170 -1188321 - Invader3_I LTR Gypsy -1083 3805 3403 4 595 1791 133 0 3 chr3LHet 1367204 1367490 -1188001 - Invader3_I LTR Gypsy -2063 2825 2541 4 595 1115 225 162 33 chr3LHet 1367488 1367847 -1187644 - Invader3_I LTR Gypsy -2681 2207 1803 4 595 1277 127 22 7 chr3LHet 1367850 1368129 -1187362 - HELENA_RT LINE Jockey -2 1315 1172 4 595 373 66 98 0 chr3LHet 1368127 1368188 -1187303 - DNAREP1_DM LINE Penelope -478 116 50 4 595 1301 328 41 26 chr3LHet 1368964 1369702 -1185789 - DIVER2_I LTR Pao -80 4067 3319 4 595 365 322 108 25 chr3LHet 1369726 1369930 -1185561 - DIVER2_I LTR Pao -902 3245 3025 4 595 305 333 8 8 chr3LHet 1370348 1370475 -1185016 - DIVER2_I LTR Pao -2056 2091 1965 4 595 2793 115 59 41 chr3LHet 1370869 1371359 -1184132 - G3_DM LINE Jockey -4025 580 82 4 595 380 330 42 84 chr3LHet 1370938 1371414 -1184077 - DIVER2_I LTR Pao -2675 1472 1017 4 595 285 228 0 0 chr3LHet 1371640 1371697 -1183794 - TRAM_I LTR Pao -1540 1168 1112 4 595 625 108 0 11 chr3LHet 1372414 1372508 -1182983 - G3_DM LINE Jockey -4512 93 1 4 595 3359 46 1 14 chr3LHet 1372583 1373022 -1182469 - STALKER4_LTR LTR Gypsy -3 399 1 4 595 41901 9 4 1 chr3LHet 1373022 1377857 -1177634 - STALKER4_I LTR Gypsy 0 6530 1681 4 595 1999 129 45 21 chr3LHet 1377860 1378241 -1177250 - STALKER4_I LTR Gypsy -5577 953 564 4 595 2468 14 0 0 chr3LHet 1378255 1378537 -1176954 - STALKER4_LTR LTR Gypsy -120 282 1 4 595 31 82 0 0 chr3LHet 1379242 1379315 -1176176 + AT_rich Low_complexity Low_complexity 1 73 0 4 595 251 266 88 61 chr3LHet 1379533 1379681 -1175810 - DIVER2_I LTR Pao -707 3440 3289 4 595 237 0 0 0 chr3LHet 1380784 1380810 -1174681 - DNAREP1_DM LINE Penelope -1 593 568 4 595 5656 121 38 76 chr3LHet 1380810 1382009 -1173482 + PROTOP_B DNA P 1 1153 0 4 595 809 126 154 0 chr3LHet 1382009 1382152 -1173339 - DNAREP1_DM LINE Penelope -20 574 410 4 595 503 100 0 0 chr3LHet 1382146 1382216 -1173275 - DNAREP1_DM LINE Penelope -490 104 35 4 595 365 164 62 18 chr3LHet 1383159 1383271 -1172220 + DMCR1A LINE CR1 7 123 -4347 4 595 1339 121 172 8 chr3LHet 1383298 1383548 -1171943 + DMCR1A LINE CR1 451 741 -3729 4 595 595 158 0 82 chr3LHet 1383558 1383668 -1171823 + DMCR1A LINE CR1 929 1029 -3441 4 595 1231 110 166 114 chr3LHet 1383687 1383995 -1171496 + DMCR1A LINE CR1 1219 1542 -2928 4 595 26 88 0 0 chr3LHet 1384878 1384946 -1170545 + AT_rich Low_complexity Low_complexity 1 68 0 4 595 623 101 0 57 chr3LHet 1385397 1385502 -1169989 - DNAREP1_DM LINE Penelope 0 594 496 4 595 32 67 0 0 chr3LHet 1385686 1385746 -1169745 + AT_rich Low_complexity Low_complexity 1 60 0 4 595 1578 83 65 0 chr3LHet 1385771 1386001 -1169490 - DNAREP1_DM LINE Penelope -106 488 244 4 595 23 0 0 0 chr3LHet 1386001 1386024 -1169467 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 892 310 106 63 chr3LHet 1386884 1388054 -1167437 + QUASIMODO_I LTR Gypsy 379 1589 -4374 4 595 2663 237 11 9 chr3LHet 1388068 1388716 -1166775 + IDEFIX_I LTR Gypsy 1641 2289 -3339 4 595 3312 252 24 8 chr3LHet 1388715 1389734 -1165757 + QUASIMODO_I LTR Gypsy 2862 3896 -2164 4 595 3306 47 2 12 chr3LHet 1389735 1390147 -1165344 + G5_DM LINE Jockey 4449 4856 0 4 595 1149 213 62 16 chr3LHet 1390142 1390447 -1165044 + TV1I LTR Gypsy 3782 4100 -1863 4 595 416 162 457 12 chr3LHet 1390515 1390689 -1164802 - DNAREP1_DM LINE Penelope -342 252 2 4 595 31 44 0 0 chr3LHet 1390906 1390951 -1164540 + AT_rich Low_complexity Low_complexity 1 45 0 4 595 1661 84 225 6 chr3LHet 1392278 1392614 -1162877 + DNAREP1_DM LINE Penelope 184 594 0 4 595 239 297 20 10 chr3LHet 1393082 1393184 -1162307 + Invader2_I LTR Gypsy 3052 3154 -1438 4 595 31 0 0 0 chr3LHet 1394224 1394255 -1161236 + AT_rich Low_complexity Low_complexity 1 31 0 4 595 2446 61 52 19 chr3LHet 1394675 1395486 -1160005 - PROTOP_B DNA P -225 928 1 4 595 226 191 60 0 chr3LHet 1395501 1395585 -1159906 + PROTOP DNA P 3528 3616 -864 4 595 969 84 0 6 chr3LHet 1395574 1395741 -1159750 + S_DM DNA Tc1 1531 1696 -40 4 595 33 73 0 0 chr3LHet 1395952 1396020 -1159471 + AT_rich Low_complexity Low_complexity 1 68 0 4 595 39 74 0 0 chr3LHet 1397223 1397304 -1158187 + AT_rich Low_complexity Low_complexity 1 81 0 4 595 3210 6 0 0 chr3LHet 1398499 1398845 -1156646 - Invader4_LTR LTR Gypsy 0 346 1 4 595 21575 4 16 0 chr3LHet 1398845 1401221 -1154270 - Invader4_I LTR Gypsy 0 2413 1 4 595 3210 6 0 0 chr3LHet 1401221 1401567 -1153924 - Invader4_LTR LTR Gypsy 0 346 1 4 595 1487 73 0 120 chr3LHet 1401567 1401817 -1153674 - DNAREP1_DM LINE Penelope -96 498 279 4 595 27 0 0 0 chr3LHet 1401861 1401888 -1153603 + AT_rich Low_complexity Low_complexity 1 27 0 4 595 279 246 0 0 chr3LHet 1402028 1402089 -1153402 + TRAM_I LTR Pao 1108 1168 -1540 4 595 382 314 62 104 chr3LHet 1402315 1402784 -1152707 + DIVER2_I LTR Pao 1017 1465 -2682 4 595 2844 117 59 41 chr3LHet 1402370 1402860 -1152631 + G3_DM LINE Jockey 82 580 -4025 4 595 9266 78 51 70 chr3LHet 1403222 1404715 -1150776 + CIRCE LINE Composite 3516 4980 -1376 4 595 324 353 95 24 chr3LHet 1404898 1405235 -1150256 + DIVER2_I LTR Pao 2029 2389 -1758 4 595 1227 87 5 31 chr3LHet 1406204 1406395 -1149096 - Gypsy8_LTR LTR Gypsy -47 257 72 4 595 1486 57 77 106 chr3LHet 1406382 1406655 -1148836 - Gypsy8_I LTR Gypsy -44 4303 4039 4 595 2237 113 67 30 chr3LHet 1406649 1407050 -1148441 - Gypsy8_I LTR Gypsy -511 3836 3421 4 595 3935 198 47 23 chr3LHet 1407076 1408427 -1147064 - Gypsy8_I LTR Gypsy -3510 3143 1036 4 595 3539 66 7 0 chr3LHet 1408484 1408938 -1146553 - Gypsy8_I LTR Gypsy -3311 1036 580 4 595 2714 50 3 38 chr3LHet 1408970 1409343 -1146148 - Gypsy8_I LTR Gypsy -3758 589 230 4 595 2340 50 248 12 chr3LHet 1410135 1410541 -1144950 + DOC4_DM LINE Jockey 968 1469 -1322 4 595 2495 301 121 25 chr3LHet 1410550 1412139 -1143352 + DOC3_DM LINE Jockey 2981 4721 -19 4 595 1228 108 83 5 chr3LHet 1412330 1412534 -1142957 + G3_DM LINE Jockey 82 301 -4304 4 595 901 67 0 0 chr3LHet 1412975 1413095 -1142396 - Gypsy8_I LTR Gypsy -4227 120 1 4 595 1140 123 17 9 chr3LHet 1413095 1413304 -1142187 - Gypsy8_LTR LTR Gypsy 0 304 6 4 595 870 70 77 83 chr3LHet 1413291 1413447 -1142044 - Gypsy8_I LTR Gypsy -20 4327 4173 4 595 1535 101 190 23 chr3LHet 1413451 1413762 -1141729 - Gypsy8_I LTR Gypsy -293 4054 3658 4 595 44 0 0 0 chr3LHet 1413989 1414033 -1141458 + AT_rich Low_complexity Low_complexity 1 44 0 4 595 1390 176 4 26 chr3LHet 1414136 1414405 -1141086 + DMRT1C LINE R1 6 268 -5175 4 595 1095 37 0 7 chr3LHet 1414409 1414546 -1140945 + DMRT1C LINE R1 1743 1878 -3565 4 595 2341 89 53 4 chr3LHet 1414544 1415120 -1140371 + DMRT1C LINE R1 2183 2485 -2958 4 595 847 133 35 108 chr3LHet 1415355 1415558 -1139933 - DMCR1A LINE CR1 -2839 1631 1444 4 595 2293 71 14 0 chr3LHet 1415553 1415850 -1139641 + DMRT1C LINE R1 2333 2633 -2810 4 595 14117 70 46 8 chr3LHet 1415912 1418537 -1136954 + DMRT1C LINE R1 2635 5359 -84 4 595 514 100 0 0 chr3LHet 1419318 1419388 -1136103 + DNAREP1_DM LINE Penelope 35 104 -490 4 595 843 119 154 0 chr3LHet 1419382 1419525 -1135966 + DNAREP1_DM LINE Penelope 410 574 -20 4 595 4138 57 7 11 chr3LHet 1419525 1420168 -1135323 - PROTOP_A DNA P 0 1105 520 4 595 1931 42 0 0 chr3LHet 1420187 1420425 -1135066 - PROTOP_A DNA P -561 544 307 4 595 19514 70 46 5 chr3LHet 1420508 1423125 -1132366 + DMRT1C LINE R1 2635 5359 -84 4 595 514 100 0 0 chr3LHet 1423906 1423976 -1131515 + DNAREP1_DM LINE Penelope 35 104 -490 4 595 843 119 154 0 chr3LHet 1423970 1424113 -1131378 + DNAREP1_DM LINE Penelope 410 574 -20 4 595 4118 60 11 10 chr3LHet 1424113 1424756 -1130735 - PROTOP_A DNA P 0 1105 520 4 595 3578 48 0 0 chr3LHet 1424775 1425214 -1130277 - PROTOP_A DNA P -561 544 106 4 595 2926 56 56 6 chr3LHet 1425230 1425796 -1129695 - PROTOP_B DNA P -181 972 336 4 595 1372 32 6 0 chr3LHet 1425804 1425961 -1129530 - PROTOP_A DNA P -947 158 1 4 595 243 0 0 0 chr3LHet 1425961 1425987 -1129504 + DNAREP1_DM LINE Penelope 568 593 -1 4 595 2385 136 38 46 chr3LHet 1426975 1427392 -1128099 + G3_DM LINE Jockey 166 579 -4026 4 595 986 338 79 37 chr3LHet 1427171 1428198 -1127293 + DIVER2_I LTR Pao 1320 2389 -1758 4 595 368 322 108 25 chr3LHet 1429554 1429758 -1125733 + DIVER2_I LTR Pao 3025 3245 -902 4 595 369 370 19 11 chr3LHet 1429954 1430222 -1125269 + DIVER2_I LTR Pao 3719 3988 -159 4 595 922 179 46 7 chr3LHet 1430587 1430816 -1124675 + DOC4_DM LINE Jockey 1735 2056 -2636 4 595 384 246 65 34 chr3LHet 1430816 1431036 -1124455 + FW3_DM LINE Jockey 1526 1622 -1510 4 595 3685 201 153 35 chr3LHet 1431095 1432478 -1123013 + DOC4_DM LINE Jockey 2081 3973 -767 4 595 28 48 0 0 chr3LHet 1432798 1432840 -1122651 + AT_rich Low_complexity Low_complexity 1 42 0 4 595 222 100 15 91 chr3LHet 1433110 1433176 -1122315 + (TTATA)n Simple_repeat Simple_repeat 4 64 0 4 595 228 229 45 54 chr3LHet 1433522 1433633 -1121858 + Transib5 DNA Transib 960 1069 -1932 4 595 336 130 0 42 chr3LHet 1433984 1434056 -1121435 + DOC LINE Jockey 4624 4692 -33 4 595 240 292 52 52 chr3LHet 1434084 1434239 -1121252 - MICROPIA_I LTR Gypsy -707 3769 3615 4 595 2504 64 128 18 chr3LHet 1434346 1434730 -1120761 - DMCR1A LINE CR1 -2 4468 4043 4 595 1448 56 94 0 chr3LHet 1434716 1435056 -1120435 - DMCR1A LINE CR1 -639 3831 3460 4 595 13262 47 24 8 chr3LHet 1435056 1436763 -1118728 - S2_DM DNA Tc1 0 1735 1 4 595 4229 75 23 2 chr3LHet 1436763 1437338 -1118153 - DMCR1A LINE CR1 -1009 3461 2875 4 595 6275 55 148 8 chr3LHet 1437339 1438263 -1117228 - DMCR1A LINE CR1 -1827 2643 1590 4 595 5147 59 159 7 chr3LHet 1438269 1439196 -1116295 - DMCR1A LINE CR1 -3215 1255 188 4 595 1188 305 74 8 chr3LHet 1439252 1439850 -1115641 - MICROPIA_I LTR Gypsy -1271 3205 2569 4 595 248 310 50 25 chr3LHet 1440300 1440419 -1115072 - MICROPIA_I LTR Gypsy -4309 167 46 4 595 4167 62 26 0 chr3LHet 1440756 1441289 -1114202 + DMCR1A LINE CR1 2424 2970 -1500 4 595 1090 102 11 57 chr3LHet 1441256 1441433 -1114058 + DMCR1A LINE CR1 3309 3477 -993 4 74 4545 33 6 2 chr3LHet 1441453 1441996 -1113495 + DMCR1A LINE CR1 3918 4462 -8 4 596 530 143 311 15 chr3LHet 1441997 1442132 -1113359 + DOC LINE Jockey 362 536 -4189 4 596 3485 119 6 4 chr3LHet 1442115 1442631 -1112860 + DOC LINE Jockey 1120 1636 -3089 4 596 1452 138 9 0 chr3LHet 1442627 1442851 -1112640 + DOC LINE Jockey 1752 1977 -2748 4 596 7780 67 124 2 chr3LHet 1442870 1444143 -1111348 - BS3_DM LINE Jockey -127 1663 235 4 596 341 286 0 0 chr3LHet 1444150 1444262 -1111229 - BS2 LINE Jockey -1837 2884 2773 4 596 757 19 38 0 chr3LHet 1444263 1444369 -1111122 - DOC3_DM LINE Jockey -1 4739 4630 4 596 7491 198 89 94 chr3LHet 1444366 1447127 -1108364 - DOC3_DM LINE Jockey -244 4496 1751 4 596 6001 40 4 0 chr3LHet 1447107 1447852 -1107639 - DMRT1B LINE R1 0 5183 4436 4 596 31417 27 17 3 chr3LHet 1447849 1451705 -1103786 - DMRT1B LINE R1 -1312 3871 1 4 596 2914 47 62 0 chr3LHet 1451882 1452288 -1103203 - DOC3_DM LINE Jockey -2950 1790 1360 4 596 1456 270 21 19 chr3LHet 1452284 1452770 -1102721 - BS2 LINE Jockey -1937 2784 2298 4 596 3277 65 152 0 chr3LHet 1452774 1453374 -1102117 - BS3_DM LINE Jockey -759 1031 341 4 596 675 47 37 0 chr3LHet 1453410 1453517 -1101974 - DOC3_DM LINE Jockey 0 4740 4630 4 596 7726 33 80 1 chr3LHet 1453514 1454897 -1100594 - DOC3_DM LINE Jockey -244 4496 3005 4 596 2628 39 9 3 chr3LHet 1454896 1455229 -1100262 - DOC3_DM LINE Jockey -1886 2854 2520 4 596 4314 35 13 2 chr3LHet 1455215 1455760 -1099731 - DOC3_DM LINE Jockey -2439 2301 1751 4 596 3099 38 86 0 chr3LHet 1455740 1456263 -1099228 - DMRT1B LINE R1 0 5183 4616 4 596 2997 39 5 18 chr3LHet 1481265 1481661 -1073830 - BATUMI_I LTR Pao -5788 2175 1785 4 596 2066 35 3 34 chr3LHet 1481680 1481974 -1073517 - BATUMI_I LTR Pao -679 7284 7000 4 596 4909 29 97 11 chr3LHet 1481972 1482641 -1072850 - DOC3_DM LINE Jockey -1009 3731 3005 4 596 2564 43 21 0 chr3LHet 1482640 1482968 -1072523 - DOC3_DM LINE Jockey -1886 2854 2520 4 596 4339 28 9 6 chr3LHet 1482954 1483491 -1072000 - DOC3_DM LINE Jockey -2439 2301 1763 4 596 5421 39 65 0 chr3LHet 1483476 1484178 -1071313 - DMRT1B LINE R1 0 5183 4436 4 596 20496 28 27 3 chr3LHet 1484175 1487992 -1067499 - DMRT1B LINE R1 -1312 3871 1 4 596 2941 49 59 0 chr3LHet 1488169 1488576 -1066915 - DOC3_DM LINE Jockey -2950 1790 1360 4 596 1480 264 21 19 chr3LHet 1488572 1489058 -1066433 - BS2 LINE Jockey -1937 2784 2298 4 596 5303 48 11 0 chr3LHet 1489075 1489742 -1065749 - BS3_DM LINE Jockey -776 1014 341 4 596 712 37 37 0 chr3LHet 1489778 1489885 -1065606 - DOC3_DM LINE Jockey 0 4740 4630 4 596 7660 32 75 5 chr3LHet 1489882 1491277 -1064214 - DOC3_DM LINE Jockey -244 4496 3005 4 596 2168 44 11 0 chr3LHet 1491296 1491570 -1063921 - DOC3_DM LINE Jockey -1944 2796 2520 4 596 4339 28 9 6 chr3LHet 1491556 1492093 -1063398 - DOC3_DM LINE Jockey -2439 2301 1763 4 596 5421 39 65 0 chr3LHet 1492078 1492780 -1062711 - DMRT1B LINE R1 0 5183 4436 4 596 3470 24 0 0 chr3LHet 1492777 1493187 -1062304 - DMRT1B LINE R1 -1312 3871 3462 4 596 12793 111 48 2 chr3LHet 1493186 1495174 -1060317 - BS2 LINE Jockey -2637 2084 6 4 596 307 151 23 0 chr3LHet 1495179 1495265 -1060226 + DOC LINE Jockey 4636 4723 -2 4 596 15129 84 37 11 chr3LHet 1495263 1497451 -1058040 - G5A_DM LINE Jockey -37 2804 559 4 596 258 221 90 13 chr3LHet 1498185 1498263 -1057228 + DIVER2_I LTR Pao 3049 3132 -1015 4 596 257 200 0 0 chr3LHet 1498268 1498323 -1057168 + DIVER2_I LTR Pao 3367 3421 -726 4 596 285 179 0 18 chr3LHet 1498857 1498914 -1056577 - Gypsy8_LTR LTR Gypsy -248 56 1 4 596 343 230 12 90 chr3LHet 1498915 1499082 -1056409 - Gypsy8_I LTR Gypsy 0 4347 4194 4 596 363 166 541 14 chr3LHet 1499311 1499457 -1056034 - Gypsy8_I LTR Gypsy -529 3818 3596 4 596 527 168 426 30 chr3LHet 1499478 1499703 -1055788 - DNAREP1_DM LINE Penelope -230 364 50 4 596 1977 45 8 0 chr3LHet 1499754 1500000 -1055491 - STALKER4_LTR LTR Gypsy -23 379 132 4 596 1055 30 0 8 chr3LHet 1500000 1500132 -1055359 - STALKER4_LTR LTR Gypsy -271 131 1 4 596 256 108 0 0 chr3LHet 1500151 1500188 -1055303 - DNAREP1_DM LINE Penelope -557 37 1 4 596 1160 161 33 4 chr3LHet 1500185 1500428 -1055063 - DM176_I LTR Gypsy -685 5735 5486 4 596 258 185 0 0 chr3LHet 1500687 1500741 -1054750 - DM297_I LTR Gypsy -922 5245 5192 4 596 1807 166 87 111 chr3LHet 1501003 1501807 -1053684 - PROTOP_A DNA P -56 1097 183 4 596 2075 189 9 25 chr3LHet 1501823 1502262 -1053229 + Gypsy_LTR LTR Gypsy 25 456 -26 4 596 2774 278 126 12 chr3LHet 1502482 1503717 -1051774 + BS2 LINE Jockey 402 1777 -2944 4 596 23243 48 12 0 chr3LHet 1503716 1506521 -1048970 + BS2 LINE Jockey 1884 4721 0 4 596 604 185 261 15 chr3LHet 1506519 1506849 -1048642 + Gypsy_I LTR Gypsy 122 532 -5975 4 596 38293 1 0 1 chr3LHet 1506849 1511029 -1044462 - FW_DM LINE Jockey 0 4692 518 4 596 21767 76 0 0 chr3LHet 1511037 1513776 -1041715 + Gypsy_I LTR Gypsy 508 3246 -3261 4 596 20071 17 1 0 chr3LHet 1513778 1516036 -1039455 - FW_DM LINE Jockey 0 4692 2433 4 596 7034 21 0 0 chr3LHet 1516035 1516840 -1038651 - FW_DM LINE Jockey -2561 2131 1327 4 596 10228 24 0 14 chr3LHet 1516839 1518040 -1037451 - FW_DM LINE Jockey -3504 1188 5 4 596 21918 134 7 14 chr3LHet 1518052 1521343 -1034148 + Gypsy_I LTR Gypsy 3239 6507 0 4 596 2072 189 7 26 chr3LHet 1521359 1521788 -1033703 + Gypsy_LTR LTR Gypsy 25 445 -37 4 596 1376 71 11 16 chr3LHet 1521798 1521985 -1033506 - PROTOP_B DNA P -967 186 1 4 596 692 265 29 25 chr3LHet 1522673 1522913 -1032578 + Invader6_I LTR Gypsy 955 1195 -2904 4 596 310 255 9 64 chr3LHet 1522947 1523056 -1032435 + Invader6_I LTR Gypsy 1381 1483 -2616 4 596 20032 17 1 0 chr3LHet 1523058 1525311 -1030180 - FW_DM LINE Jockey -5 4687 2433 4 596 6234 18 22 0 chr3LHet 1525310 1526029 -1029462 - FW_DM LINE Jockey -2561 2131 1397 4 596 6858 7 0 0 chr3LHet 1526028 1526784 -1028707 - FW_DM LINE Jockey -3562 1130 375 4 596 1076 271 118 25 chr3LHet 1526833 1527344 -1028147 + Invader6_I LTR Gypsy 1525 2082 -2017 4 596 267 191 46 31 chr3LHet 1527972 1528037 -1027454 + Invader1_I LTR Gypsy 3121 3186 0 4 596 246 195 0 0 chr3LHet 1528207 1528248 -1027243 + Invader6_LTR LTR Gypsy 165 205 -188 4 596 298 141 46 15 chr3LHet 1528520 1528585 -1026906 - NINJA_LTR LTR Pao -135 182 116 4 596 256 173 0 19 chr3LHet 1528639 1528692 -1026799 - Gypsy8_LTR LTR Gypsy -252 52 1 4 596 228 271 0 28 chr3LHet 1528693 1528765 -1026726 - Gypsy8_I LTR Gypsy 0 4347 4278 4 596 628 177 298 20 chr3LHet 1529392 1529644 -1025847 - DMCR1A LINE CR1 -2911 1559 1238 4 596 240 191 0 0 chr3LHet 1529904 1529951 -1025540 + DNAREP1_DM LINE Penelope 439 485 -109 4 596 654 206 144 18 chr3LHet 1529976 1530198 -1025293 - DM412 LTR Gypsy -2433 4464 4215 4 596 370 192 150 60 chr3LHet 1530220 1530353 -1025138 - STALKER4_I LTR Gypsy -2777 3753 3667 4 596 26 0 0 0 chr3LHet 1530765 1530791 -1024700 + AT_rich Low_complexity Low_complexity 1 26 0 4 596 255 328 38 4 chr3LHet 1530862 1531098 -1024393 - Stalker2_I LTR Gypsy -4168 3234 2991 4 596 458 127 25 0 chr3LHet 1531334 1531413 -1024078 - DNAREP1_DM LINE Penelope -268 326 246 4 596 1487 124 122 24 chr3LHet 1531420 1531708 -1023783 - DNAREP1_DM LINE Penelope -278 316 1 4 596 24 67 0 0 chr3LHet 1531874 1531919 -1023572 + AT_rich Low_complexity Low_complexity 1 45 0 4 596 25 0 0 0 chr3LHet 1532990 1533015 -1022476 + AT_rich Low_complexity Low_complexity 1 25 0 4 596 26 93 0 0 chr3LHet 1533066 1533141 -1022350 + AT_rich Low_complexity Low_complexity 1 75 0 4 596 606 248 52 38 chr3LHet 1533160 1533449 -1022042 + DNAREP1_DM LINE Penelope 1 293 -301 4 596 12877 89 44 63 chr3LHet 1533450 1535603 -1019888 - DIVER2_I LTR Pao -2035 2112 1 4 596 3499 18 0 0 chr3LHet 1535603 1535988 -1019503 - DIVER2_LTR LTR Pao 0 385 1 4 596 1648 122 53 10 chr3LHet 1535988 1536280 -1019211 - DNAREP1_DM LINE Penelope -289 305 1 4 596 22 56 0 0 chr3LHet 1536417 1536453 -1019038 + AT_rich Low_complexity Low_complexity 1 36 0 4 596 792 98 8 12 chr3LHet 1536931 1537105 -1018386 - DNAREP1_DM LINE Penelope -262 332 120 4 596 427 221 65 52 chr3LHet 1537663 1537911 -1017580 - Gypsy12A_LTR LTR Gypsy -446 1834 1584 4 596 3238 63 8 14 chr3LHet 1537940 1538376 -1017115 + STALKER4_LTR LTR Gypsy 1 399 -3 4 596 25 0 0 0 chr3LHet 1538464 1538489 -1017002 + AT_rich Low_complexity Low_complexity 1 25 0 4 596 45775 31 18 7 chr3LHet 1538513 1544203 -1011288 + STALKER4_I LTR Gypsy 291 6089 -441 4 596 1688 21 67 0 chr3LHet 1544220 1544458 -1011033 + STALKER4_I LTR Gypsy 6277 6530 0 4 596 3248 51 25 15 chr3LHet 1544458 1544887 -1010604 + STALKER4_LTR LTR Gypsy 1 391 -11 4 596 1379 169 25 98 chr3LHet 1544898 1545288 -1010203 - Gypsy12_LTR LTR Gypsy -826 1510 1040 4 596 1188 134 53 0 chr3LHet 1545304 1545491 -1010000 - Gypsy12A_LTR LTR Gypsy -2083 197 1 4 596 363 127 0 0 chr3LHet 1545498 1545553 -1009938 + DNAREP1_DM LINE Penelope 540 594 0 4 596 25 31 0 0 chr3LHet 1545597 1545629 -1009862 + AT_rich Low_complexity Low_complexity 1 32 0 4 596 27 73 0 0 chr3LHet 1545691 1545746 -1009745 + AT_rich Low_complexity Low_complexity 1 55 0 4 596 21 0 0 0 chr3LHet 1546016 1546037 -1009454 + AT_rich Low_complexity Low_complexity 1 21 0 4 596 1906 74 6 109 chr3LHet 1546767 1547087 -1008404 + Gypsy4_LTR LTR Gypsy 1 287 0 4 596 40152 37 44 16 chr3LHet 1547087 1552141 -1003350 + Gypsy4_I LTR Gypsy 1 5294 -994 4 596 4621 49 5 0 chr3LHet 1552138 1552694 -1002797 + Gypsy4_I LTR Gypsy 5532 6090 -198 4 596 705 130 145 0 chr3LHet 1552705 1552843 -1002648 + Gypsy4_LTR LTR Gypsy 1 158 -129 4 596 808 211 41 73 chr3LHet 1553029 1553249 -1002242 - DM176_LTR LTR Gypsy -122 385 173 4 596 2094 236 111 13 chr3LHet 1553918 1554555 -1000936 + Invader3_I LTR Gypsy 56 845 -4043 4 596 248 94 0 0 chr3LHet 1554559 1554591 -1000900 + Invader3_I LTR Gypsy 1440 1471 -3417 4 596 679 87 47 37 chr3LHet 1554592 1554699 -1000792 + PROTOP_B DNA P 1046 1153 0 4 596 1597 232 120 2 chr3LHet 1554699 1555148 -1000343 + Invader3_I LTR Gypsy 1706 2207 -2681 4 596 1900 138 0 0 chr3LHet 1555146 1555435 -1000056 + Invader3_I LTR Gypsy 2541 2829 -2059 4 596 1098 164 377 0 chr3LHet 1555462 1555846 -999645 + Invader3_I LTR Gypsy 3399 3927 -961 4 596 1520 153 66 0 chr3LHet 1555848 1556135 -999356 - Invader3_I LTR Gypsy -92 4796 4491 4 596 310 89 0 0 chr3LHet 1556333 1556378 -999113 - DMRT1B LINE R1 -14 5169 5125 4 596 3826 35 71 12 chr3LHet 1556381 1557401 -998090 + PROTOP DNA P 1 1161 -3319 4 596 1413 16 0 0 chr3LHet 1557399 1557581 -997910 + PROTOP DNA P 3761 3942 -538 4 596 760 219 139 20 chr3LHet 1559637 1559888 -995603 + Invader6_I LTR Gypsy 1708 1988 -2111 4 596 305 89 250 0 chr3LHet 1559886 1559942 -995549 - DNAREP1_DM LINE Penelope -59 535 466 4 596 704 158 55 30 chr3LHet 1559962 1560164 -995327 - DNAREP1_DM LINE Penelope -270 324 118 4 596 376 69 0 17 chr3LHet 1560699 1560758 -994733 - DNAREP1_DM LINE Penelope 0 594 537 4 596 340 155 0 0 chr3LHet 1561103 1561161 -994330 + DIVER2_I LTR Pao 4088 4145 -2 4 596 244 167 0 0 chr3LHet 1561473 1561527 -993964 - DM297_I LTR Gypsy -922 5245 5192 4 596 1645 123 122 30 chr3LHet 1561546 1562063 -993428 - PROTOP_A DNA P -4 1101 570 4 596 203 189 0 0 chr3LHet 1562316 1562353 -993138 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 596 378 0 0 0 chr3LHet 1562727 1562769 -992722 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 596 665 75 0 0 chr3LHet 1564526 1564619 -990872 + PROTOP DNA P 3937 4029 -451 4 596 2038 152 3 21 chr3LHet 1564629 1565012 -990479 - DMRT1B LINE R1 -103 5080 4705 4 596 2869 152 14 2 chr3LHet 1565019 1565520 -989971 - DMRT1B LINE R1 -789 4394 3888 4 596 696 274 173 12 chr3LHet 1565520 1566014 -989477 + Invader6_I LTR Gypsy 928 1869 -2230 4 596 305 89 250 0 chr3LHet 1566019 1566075 -989416 - DNAREP1_DM LINE Penelope -59 535 466 4 596 704 158 55 30 chr3LHet 1566095 1566297 -989194 - DNAREP1_DM LINE Penelope -270 324 118 4 596 376 69 0 17 chr3LHet 1566832 1566891 -988600 - DNAREP1_DM LINE Penelope 0 594 537 4 596 340 155 0 0 chr3LHet 1567236 1567294 -988197 + DIVER2_I LTR Pao 4088 4145 -2 4 596 244 167 0 0 chr3LHet 1567606 1567660 -987831 - DM297_I LTR Gypsy -922 5245 5192 4 596 1645 123 122 30 chr3LHet 1567679 1568196 -987295 - PROTOP_A DNA P -4 1101 570 4 596 203 189 0 0 chr3LHet 1568449 1568486 -987005 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 596 378 0 0 0 chr3LHet 1568860 1568902 -986589 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 596 388 102 371 38 chr3LHet 1569807 1569939 -985552 - DNAREP1_DM LINE Penelope -34 560 385 4 596 257 206 59 93 chr3LHet 1570107 1570225 -985266 - DNAREP1_DM LINE Penelope -275 319 206 4 596 1672 99 53 21 chr3LHet 1570473 1570849 -984642 - DNAREP1_DM LINE Penelope -303 291 1 4 596 21 0 0 0 chr3LHet 1570856 1570877 -984614 + AT_rich Low_complexity Low_complexity 1 21 0 4 596 22 56 0 0 chr3LHet 1570929 1570965 -984526 + AT_rich Low_complexity Low_complexity 1 36 0 4 596 23 0 0 0 chr3LHet 1571167 1571190 -984301 + AT_rich Low_complexity Low_complexity 1 23 0 4 596 32 75 0 0 chr3LHet 1572483 1572550 -982941 + AT_rich Low_complexity Low_complexity 1 67 0 4 596 303 253 10 21 chr3LHet 1572688 1572785 -982706 - DNAREP1_DM LINE Penelope -154 440 345 4 74 1299 126 80 120 chr3LHet 1572846 1573197 -982294 - DNAREP1_DM LINE Penelope 0 594 258 4 597 444 224 174 0 chr3LHet 1573197 1573267 -982224 - DNAREP1_DM LINE Penelope -65 529 445 4 597 270 81 0 0 chr3LHet 1573267 1573304 -982187 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 4 597 444 224 174 0 chr3LHet 1573304 1573394 -982097 - DNAREP1_DM LINE Penelope -150 444 342 4 597 699 65 131 0 chr3LHet 1573457 1573564 -981927 - DNAREP1_DM LINE Penelope -9 585 465 4 597 548 275 38 0 chr3LHet 1574387 1574547 -980944 - DIVER2_I LTR Pao -1723 2424 2259 4 597 864 136 11 16 chr3LHet 1575171 1575372 -980119 + DNAREP1_DM LINE Penelope 120 332 -262 4 597 1145 143 72 16 chr3LHet 1575351 1575600 -979891 + DNAREP1_DM LINE Penelope 183 445 -149 4 597 3643 49 8 0 chr3LHet 1575600 1576089 -979402 + G4_DM LINE Jockey 3363 3855 -1 4 597 608 199 69 91 chr3LHet 1576127 1576359 -979132 + FB4_DM DNA Tc1 1460 1686 -2403 4 597 4998 64 113 3 chr3LHet 1576482 1577386 -978105 + FB4_DM DNA Tc1 1110 2112 -1977 4 597 668 71 205 0 chr3LHet 1577392 1577519 -977972 + FB4_DM DNA Tc1 2606 2758 -1331 4 597 1375 126 5 0 chr3LHet 1577890 1578112 -977379 - Gypsy12A_LTR LTR Gypsy -2057 223 1 4 597 2176 152 62 7 chr3LHet 1578112 1578531 -976960 - Gypsy12_I LTR Gypsy 0 5546 5105 4 597 8724 182 65 4 chr3LHet 1578524 1580302 -975189 - Gypsy12_I LTR Gypsy -1165 4381 2495 4 597 5411 172 75 10 chr3LHet 1580307 1581419 -974072 - Gypsy12_I LTR Gypsy -3407 2139 955 4 597 3454 24 9 0 chr3LHet 1581419 1581843 -973648 - ROO_LTR LTR Pao 0 428 1 4 597 46421 20 39 3 chr3LHet 1581843 1584534 -970957 - ROO_I LTR Pao 0 8256 5490 4 597 216 0 0 0 chr3LHet 1584534 1584558 -970933 + (CATAA)n Simple_repeat Simple_repeat 2 25 0 4 597 46421 18 24 2 chr3LHet 1584558 1589545 -965946 - ROO_I LTR Pao -2767 5489 275 4 597 1248 13 0 65 chr3LHet 1589542 1589712 -965779 - ROO_I LTR Pao -8097 159 1 4 597 3505 28 2 0 chr3LHet 1589712 1590139 -965352 - ROO_LTR LTR Pao 0 428 1 4 597 1368 193 180 90 chr3LHet 1590139 1591019 -964472 - Gypsy12_I LTR Gypsy -4587 959 1 4 597 2927 91 35 7 chr3LHet 1591019 1591471 -964020 - Gypsy12A_LTR LTR Gypsy 0 2280 1816 4 597 389 182 65 39 chr3LHet 1591495 1591649 -963842 - Gypsy12A_LTR LTR Gypsy -525 1755 1598 4 597 942 181 145 58 chr3LHet 1591881 1592280 -963211 + Gypsy_LTR LTR Gypsy 29 462 -20 4 597 294 222 83 62 chr3LHet 1592371 1592563 -962928 + Gypsy_I LTR Gypsy 63 258 -6249 4 597 26 0 0 67 chr3LHet 1592563 1592608 -962883 + AT_rich Low_complexity Low_complexity 1 42 0 4 597 4194 69 7 0 chr3LHet 1592614 1593194 -962297 - BS2 LINE Jockey -6 4715 4132 4 597 1009 272 57 0 chr3LHet 1593250 1593551 -961940 + BS2 LINE Jockey 788 1105 -3616 4 597 14649 62 26 0 chr3LHet 1593672 1595647 -959844 + BS2 LINE Jockey 1591 3616 -1105 4 597 4838 208 5 4 chr3LHet 1595679 1596670 -958821 + Gypsy_I LTR Gypsy 452 1443 -5064 4 597 686 203 20 0 chr3LHet 1596670 1596818 -958673 + Gypsy_I LTR Gypsy 2276 2426 -4081 4 597 9722 147 62 0 chr3LHet 1596815 1598525 -956966 + Gypsy_I LTR Gypsy 3040 4855 -1652 4 597 275 211 0 0 chr3LHet 1598791 1598848 -956643 - DOC LINE Jockey -1878 2847 2791 4 597 4827 202 29 0 chr3LHet 1598848 1599862 -955629 - Gypsy_I LTR Gypsy -269 6238 5196 4 597 10128 145 61 0 chr3LHet 1599864 1601645 -953846 - Gypsy_I LTR Gypsy -1578 4929 3040 4 597 686 203 20 0 chr3LHet 1601642 1601790 -953701 - Gypsy_I LTR Gypsy -4081 2426 2276 4 597 4363 216 3 3 chr3LHet 1601790 1602703 -952788 - Gypsy_I LTR Gypsy -5064 1443 531 4 597 5674 133 6 3 chr3LHet 1602703 1603620 -951871 - Gypsy_I LTR Gypsy -5137 1370 452 4 597 14567 61 26 1 chr3LHet 1603652 1605629 -949862 - BS2 LINE Jockey -1105 3616 1591 4 597 1916 89 14 0 chr3LHet 1605655 1605946 -949545 + BS2 LINE Jockey 4427 4721 0 4 597 24 0 0 0 chr3LHet 1605946 1605970 -949521 + AT_rich Low_complexity Low_complexity 1 24 0 4 597 446 214 23 126 chr3LHet 1605975 1606189 -949302 - BS2 LINE Jockey -4458 263 72 4 597 3269 163 206 79 chr3LHet 1606240 1607748 -947743 - Gypsy12_I LTR Gypsy -3842 1704 6 4 597 1584 87 4 0 chr3LHet 1607748 1607977 -947514 - Gypsy12A_LTR LTR Gypsy 0 2280 2051 4 597 4412 169 65 52 chr3LHet 1607987 1609207 -946284 - Gypsy12A_LTR LTR Gypsy -525 1755 520 4 597 3716 18 50 3 chr3LHet 1609207 1610231 -945260 - PROTOP DNA P 0 1105 2 4 597 989 131 8 133 chr3LHet 1610232 1610487 -945004 - Gypsy12A_LTR LTR Gypsy -1754 526 304 4 597 261 146 0 0 chr3LHet 1610491 1610532 -944959 - Gypsy12_I LTR Gypsy -401 5145 5105 4 597 2844 192 23 15 chr3LHet 1610525 1611552 -943939 - Gypsy12_I LTR Gypsy -1165 4381 3245 4 597 590 124 208 8 chr3LHet 1611562 1611692 -943799 + DOC LINE Jockey 2891 3046 -1679 4 597 4339 108 43 4 chr3LHet 1611687 1612400 -943091 + DOC LINE Jockey 2855 3595 -1130 4 597 21 36 0 0 chr3LHet 1612413 1612441 -943050 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 248 82 198 30 chr3LHet 1612479 1612580 -942911 - Gypsy12A_LTR LTR Gypsy -465 1815 1698 4 597 1375 126 5 0 chr3LHet 1612621 1612843 -942648 - Gypsy12A_LTR LTR Gypsy -2057 223 1 4 597 2393 153 23 9 chr3LHet 1612843 1613279 -942212 - Gypsy12_I LTR Gypsy 0 5546 5105 4 597 8673 182 67 4 chr3LHet 1613272 1615047 -940444 - Gypsy12_I LTR Gypsy -1165 4381 2495 4 597 2844 196 5 0 chr3LHet 1615052 1615609 -939882 - Gypsy12_I LTR Gypsy -3407 2139 1580 4 597 2990 157 109 14 chr3LHet 1615627 1616294 -939197 - Gypsy12_I LTR Gypsy -4082 1464 734 4 597 38 22 0 0 chr3LHet 1616294 1616339 -939152 + AT_rich Low_complexity Low_complexity 1 45 0 4 597 903 201 24 14 chr3LHet 1616344 1616551 -938940 - Gypsy12_I LTR Gypsy -5048 498 290 4 597 37 0 0 0 chr3LHet 1616867 1616904 -938587 + AT_rich Low_complexity Low_complexity 1 37 0 4 597 2154 119 0 0 chr3LHet 1617441 1617786 -937705 - DOC LINE Jockey -1878 2847 2503 4 597 831 186 55 62 chr3LHet 1617856 1618148 -937343 - Gypsy_LTR LTR Gypsy -92 390 101 4 597 582 239 94 0 chr3LHet 1618138 1618297 -937194 - Gypsy_I LTR Gypsy -133 6374 6201 4 597 920 145 42 12 chr3LHet 1618270 1618438 -937053 - Gypsy_I LTR Gypsy -1139 5368 5196 4 597 6885 179 54 1 chr3LHet 1618438 1620187 -935304 - Gypsy_I LTR Gypsy -1578 4929 2948 4 597 686 203 20 0 chr3LHet 1620185 1620333 -935158 - Gypsy_I LTR Gypsy -4081 2426 2276 4 597 4872 207 5 4 chr3LHet 1620333 1621324 -934167 - Gypsy_I LTR Gypsy -5064 1443 452 4 597 14747 62 23 0 chr3LHet 1621356 1623336 -932155 - BS2 LINE Jockey -1105 3616 1591 4 597 1009 272 57 0 chr3LHet 1623457 1623758 -931733 - BS2 LINE Jockey -3616 1105 788 4 597 3942 66 48 2 chr3LHet 1623814 1624268 -931223 + BS2 LINE Jockey 4132 4612 -109 4 597 180 77 0 0 chr3LHet 1624268 1624294 -931197 + (TTA)n Simple_repeat Simple_repeat 2 27 0 4 597 3942 66 48 2 chr3LHet 1624294 1624403 -931088 + BS2 LINE Jockey 4613 4721 0 4 597 941 177 213 0 chr3LHet 1624414 1624742 -930749 + Gypsy12_I LTR Gypsy 1669 2066 -3480 4 597 284 240 13 0 chr3LHet 1624762 1624837 -930654 + Gypsy12_I LTR Gypsy 2495 2570 -2976 4 597 1243 100 35 39 chr3LHet 1625329 1625559 -929932 - Gypsy8_I LTR Gypsy -4111 236 8 4 597 383 105 0 0 chr3LHet 1625573 1625630 -929861 - Gypsy8_LTR LTR Gypsy -247 57 1 4 597 8033 186 80 3 chr3LHet 1625632 1627325 -928166 + Gypsy12_I LTR Gypsy 2558 4381 -1165 4 597 2423 153 23 7 chr3LHet 1627318 1627753 -927738 + Gypsy12_I LTR Gypsy 5105 5546 0 4 597 1375 126 5 0 chr3LHet 1627753 1627975 -927516 + Gypsy12A_LTR LTR Gypsy 1 223 -2057 4 597 248 82 198 30 chr3LHet 1628016 1628117 -927374 + Gypsy12A_LTR LTR Gypsy 1698 1815 -465 4 597 21 36 0 0 chr3LHet 1628155 1628183 -927308 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 4339 107 43 4 chr3LHet 1628196 1628909 -926582 - DOC LINE Jockey -1130 3595 2855 4 597 364 164 0 0 chr3LHet 1628904 1628965 -926526 - DOC LINE Jockey -1679 3046 2986 4 597 371 154 0 0 chr3LHet 1628969 1629034 -926457 - DOC LINE Jockey -1806 2919 2855 4 597 3159 118 108 0 chr3LHet 1629029 1629596 -925895 - DOC LINE Jockey -1679 3046 2419 4 597 411 187 51 39 chr3LHet 1629898 1630054 -925437 + Gypsy12A_LTR LTR Gypsy 1598 1755 -525 4 597 2940 89 35 7 chr3LHet 1630078 1630530 -924961 + Gypsy12A_LTR LTR Gypsy 1816 2280 0 4 597 3186 170 170 59 chr3LHet 1630530 1632456 -923035 + Gypsy12_I LTR Gypsy 1 2139 -3407 4 597 7220 173 73 5 chr3LHet 1632461 1633892 -921599 + Gypsy12_I LTR Gypsy 2495 4023 -1523 4 597 981 219 14 0 chr3LHet 1633889 1634108 -921383 + Gypsy12_I LTR Gypsy 4160 4381 -1165 4 597 2422 155 23 7 chr3LHet 1634101 1634536 -920955 + Gypsy12_I LTR Gypsy 5105 5546 0 4 597 1359 131 5 0 chr3LHet 1634536 1634758 -920733 + Gypsy12A_LTR LTR Gypsy 1 223 -2057 4 597 22 80 0 0 chr3LHet 1634823 1634873 -920618 + AT_rich Low_complexity Low_complexity 1 50 0 4 597 24 53 0 0 chr3LHet 1634928 1634966 -920525 + AT_rich Low_complexity Low_complexity 1 38 0 4 597 1807 122 19 10 chr3LHet 1634979 1635286 -920205 - DOC LINE Jockey -1130 3595 3286 4 597 577 181 7 101 chr3LHet 1635354 1635502 -919989 + DM176_LTR LTR Gypsy 151 284 -223 4 597 32 0 0 0 chr3LHet 1635642 1635674 -919817 + AT_rich Low_complexity Low_complexity 1 32 0 4 597 381 85 0 0 chr3LHet 1636433 1636492 -918999 + ZAM_LTR LTR Gypsy 1 59 -413 4 597 231 167 18 18 chr3LHet 1636700 1636755 -918736 + ZAM_LTR LTR Gypsy 296 350 -122 4 597 1069 115 138 5 chr3LHet 1636997 1637207 -918284 - DNAREP1_DM LINE Penelope -356 238 1 4 597 1686 180 101 106 chr3LHet 1638928 1639523 -915968 - DNAREP1_DM LINE Penelope 0 594 3 4 597 552 321 9 0 chr3LHet 1640135 1640359 -915132 + DIVER2_I LTR Pao 535 760 -3387 4 597 8913 57 46 22 chr3LHet 1640592 1641932 -913559 + G4_DM LINE Jockey 1 1372 -2484 4 597 270 234 0 0 chr3LHet 1641936 1642000 -913491 + DM176_LTR LTR Gypsy 221 284 -223 4 597 368 52 17 0 chr3LHet 1642191 1642249 -913242 + ZAM_LTR LTR Gypsy 1 59 -413 4 597 231 167 18 18 chr3LHet 1642474 1642529 -912962 + ZAM_LTR LTR Gypsy 296 350 -122 4 597 1069 115 138 5 chr3LHet 1642769 1642979 -912512 - DNAREP1_DM LINE Penelope -356 238 1 4 597 775 268 93 26 chr3LHet 1643574 1643842 -911649 + DIVER2_I LTR Pao 3697 3982 -165 4 597 294 244 240 18 chr3LHet 1644127 1644298 -911193 + BATUMI_I LTR Pao 5878 6086 -1877 4 597 237 229 0 0 chr3LHet 1644367 1644415 -911076 + BATUMI_I LTR Pao 6208 6255 -1708 4 597 337 280 17 0 chr3LHet 1645273 1645391 -910100 + DMCR1A LINE CR1 3575 3694 -776 4 597 258 278 51 10 chr3LHet 1645405 1645503 -909988 + DMCR1A LINE CR1 3753 3854 -616 4 597 26 82 0 0 chr3LHet 1645655 1645716 -909775 + AT_rich Low_complexity Low_complexity 1 61 0 4 597 24 53 0 0 chr3LHet 1646317 1646355 -909136 + AT_rich Low_complexity Low_complexity 1 38 0 4 597 1727 110 123 53 chr3LHet 1646385 1646798 -908693 - DNAREP1_DM LINE Penelope 0 594 153 4 597 837 195 35 71 chr3LHet 1646775 1647057 -908434 - DNAREP1_DM LINE Penelope -268 326 55 4 597 7225 158 25 42 chr3LHet 1647252 1649139 -906352 + FW3_DM LINE Jockey 1 1809 -982 4 597 374 69 0 65 chr3LHet 1649175 1649233 -906258 + FW3_DM LINE Jockey 1246 1299 -1833 4 597 10582 46 3 0 chr3LHet 1649233 1650589 -904902 + TC1_DM DNA Tc1 1 1360 -306 4 597 789 0 0 0 chr3LHet 1650588 1650681 -904810 + TC1_DM DNA Tc1 1574 1666 0 4 597 9056 69 125 60 chr3LHet 1650681 1652261 -903230 + FW3_DM LINE Jockey 1302 2986 -146 4 597 561 251 20 30 chr3LHet 1653767 1654035 -901456 + DNAREP1_DM LINE Penelope 1 390 -204 4 597 27 0 0 0 chr3LHet 1655142 1655169 -900322 + AT_rich Low_complexity Low_complexity 1 27 0 4 597 540 238 41 14 chr3LHet 1655954 1656099 -899392 - DMCR1A LINE CR1 -3472 998 850 4 597 26 30 0 0 chr3LHet 1656194 1656227 -899264 + AT_rich Low_complexity Low_complexity 1 33 0 4 597 333 281 7 7 chr3LHet 1656243 1656379 -899112 + DNAREP1_DM LINE Penelope 168 303 -291 4 597 542 216 23 29 chr3LHet 1656375 1656547 -898944 - DNAREP1_DM LINE Penelope -278 316 146 4 597 28 29 0 0 chr3LHet 1657059 1657094 -898397 + AT_rich Low_complexity Low_complexity 1 35 0 4 597 1660 37 98 55 chr3LHet 1657517 1657773 -897718 - MDG3_LTR LTR Gypsy 0 267 1 4 597 39436 15 29 3 chr3LHet 1657773 1662633 -892858 - MDG3_I LTR Gypsy 0 4986 1 4 597 1928 45 4 50 chr3LHet 1662632 1662912 -892579 - MDG3_LTR LTR Gypsy 0 267 1 4 597 1287 39 0 0 chr3LHet 1663239 1663395 -892096 + PROTOP_B DNA P 1 156 -997 4 597 1544 188 22 12 chr3LHet 1663394 1663956 -891535 - IDEFIX_I LTR Gypsy -4823 805 202 4 597 335 238 0 0 chr3LHet 1663957 1664037 -891454 - IDEFIX_I LTR Gypsy -5548 80 1 4 597 23 0 0 0 chr3LHet 1664277 1664300 -891191 + AT_rich Low_complexity Low_complexity 1 23 0 4 597 2008 29 0 0 chr3LHet 1664459 1664704 -890787 + G5_DM LINE Jockey 4420 4664 -192 4 597 1481 123 59 36 chr3LHet 1664702 1665006 -890485 - IDEFIX_LTR LTR Gypsy -283 311 1 4 597 2208 7 0 78 chr3LHet 1665019 1665326 -890165 + DM176_LTR LTR Gypsy 1 283 -224 4 597 1203 31 25 0 chr3LHet 1665327 1665487 -890004 + DM176_LTR LTR Gypsy 251 414 -93 4 597 19901 15 6 0 chr3LHet 1665491 1665651 -889840 + DM176_I LTR Gypsy 329 502 -5918 4 597 181 30 29 57 chr3LHet 1665651 1665686 -889805 + (TAA)n Simple_repeat Simple_repeat 3 36 0 4 597 48690 6 2 0 chr3LHet 1665686 1671593 -883898 + DM176_I LTR Gypsy 503 6420 0 4 597 3841 10 18 104 chr3LHet 1671593 1672148 -883343 + DM176_LTR LTR Gypsy 1 507 0 4 597 1475 126 134 0 chr3LHet 1672405 1672666 -882825 - ROO_I LTR Pao -790 7466 7171 4 597 444 77 0 71 chr3LHet 1672679 1672749 -882742 - Gypsy3_I LTR Gypsy -3661 2516 2452 4 597 228 226 21 0 chr3LHet 1672757 1672827 -882664 - Gypsy3_I LTR Gypsy -4178 2834 2770 4 597 334 154 665 0 chr3LHet 1672824 1672931 -882560 - Gypsy3_I LTR Gypsy -4162 2015 1867 4 597 1201 102 250 39 chr3LHet 1672935 1673191 -882300 - BEL_I LTR Pao -810 4594 4285 4 597 4723 47 79 17 chr3LHet 1673206 1673903 -881588 - DOC5_DM LINE Jockey 0 4682 3943 4 597 5284 67 74 74 chr3LHet 1673902 1674808 -880683 - DOC5_DM LINE Jockey -1158 3524 2619 4 597 6372 51 105 2 chr3LHet 1674777 1675654 -879837 - ZAM_I LTR Gypsy -2529 4961 3995 4 597 1026 84 217 0 chr3LHet 1675645 1675821 -879670 - DOC5_DM LINE Jockey -2817 1865 1651 4 597 2878 51 32 3 chr3LHet 1675821 1676196 -879295 - ROOA_LTR LTR Pao 0 386 1 4 597 3649 50 195 5 chr3LHet 1676196 1676757 -878734 - DOC5_DM LINE Jockey -3027 1655 987 4 597 5790 8 0 3 chr3LHet 1676757 1677417 -878074 - QUASIMODO_LTR LTR Gypsy 0 658 1 4 597 51415 12 2 0 chr3LHet 1677417 1683468 -872023 - QUASIMODO_I LTR Gypsy 0 6060 1 4 597 5703 8 8 3 chr3LHet 1683468 1684123 -871368 - QUASIMODO_LTR LTR Gypsy 0 658 1 4 597 51096 14 2 1 chr3LHet 1684123 1690174 -865317 - QUASIMODO_I LTR Gypsy 0 6060 1 4 597 5418 8 36 3 chr3LHet 1690174 1690811 -864680 - QUASIMODO_LTR LTR Gypsy 0 658 1 4 597 5566 66 151 6 chr3LHet 1690811 1691679 -863812 - DOC5_DM LINE Jockey -3687 995 1 4 597 1442 157 43 25 chr3LHet 1691676 1691957 -863534 - BEL_I LTR Pao -1121 4283 3998 4 597 303 73 0 0 chr3LHet 1691970 1692011 -863480 + DMCR1A LINE CR1 1932 1972 -2498 4 597 657 200 13 13 chr3LHet 1692027 1692184 -863307 - BEL_LTR LTR Pao 0 361 205 4 597 1896 169 110 108 chr3LHet 1692900 1693491 -862000 - DNAREP1_DM LINE Penelope 0 594 3 4 597 618 321 9 0 chr3LHet 1694103 1694327 -861164 + DIVER2_I LTR Pao 535 760 -3387 4 597 8684 46 47 23 chr3LHet 1694558 1695772 -859719 + G4_DM LINE Jockey 1 1243 -2613 4 597 13462 35 13 1 chr3LHet 1695763 1697402 -858089 + G4_DM LINE Jockey 2198 3856 0 4 597 417 226 0 11 chr3LHet 1697514 1697608 -857883 + DIVER2_I LTR Pao 888 980 -3167 4 597 309 358 20 90 chr3LHet 1697633 1697977 -857514 + DIVER2_I LTR Pao 1145 1464 -2683 4 597 876 345 73 14 chr3LHet 1698197 1698823 -856668 + DIVER2_I LTR Pao 1762 2424 -1723 4 597 540 284 88 15 chr3LHet 1699154 1699358 -856133 + DIVER2_I LTR Pao 3448 3666 -481 4 597 444 233 192 0 chr3LHet 1699396 1699516 -855975 + DIVER2_I LTR Pao 3840 3982 -165 4 597 339 238 240 18 chr3LHet 1699801 1699972 -855519 + BATUMI_I LTR Pao 5878 6086 -1877 4 597 372 280 17 0 chr3LHet 1700959 1701077 -854414 + DMCR1A LINE CR1 3575 3694 -776 4 597 286 278 51 10 chr3LHet 1701091 1701189 -854302 + DMCR1A LINE CR1 3753 3854 -616 4 597 26 82 0 0 chr3LHet 1701345 1701406 -854085 + AT_rich Low_complexity Low_complexity 1 61 0 4 597 24 53 0 0 chr3LHet 1702007 1702045 -853446 + AT_rich Low_complexity Low_complexity 1 38 0 4 597 1869 110 123 53 chr3LHet 1702075 1702488 -853003 - DNAREP1_DM LINE Penelope 0 594 153 4 597 697 175 49 24 chr3LHet 1702465 1702629 -852862 - DNAREP1_DM LINE Penelope -268 326 159 4 597 315 114 82 41 chr3LHet 1702719 1702792 -852699 - DNAREP1_DM LINE Penelope -459 135 60 4 597 44 80 0 0 chr3LHet 1702804 1702904 -852587 + AT_rich Low_complexity Low_complexity 1 100 0 4 597 32 0 0 0 chr3LHet 1702969 1703001 -852490 + AT_rich Low_complexity Low_complexity 1 32 0 4 598 8952 27 104 0 chr3LHet 1704136 1706544 -848947 - DMCR1A LINE CR1 0 4470 1813 4 598 1396 35 6 0 chr3LHet 1706548 1706718 -848773 - DMCR1A LINE CR1 -3104 1366 1196 4 598 2492 25 3 0 chr3LHet 1706718 1707004 -848487 - Gypsy4_LTR LTR Gypsy 0 287 1 4 598 52089 16 19 3 chr3LHet 1707004 1713078 -842413 - Gypsy4_I LTR Gypsy 0 6288 117 4 598 2339 31 3 37 chr3LHet 1713094 1713391 -842100 - Gypsy4_LTR LTR Gypsy 0 287 1 4 598 1940 40 0 0 chr3LHet 1713391 1713619 -841872 - DMCR1A LINE CR1 -3271 1199 972 4 598 6064 37 34 11 chr3LHet 1713616 1714401 -841090 - DMCR1A LINE CR1 -3667 803 1 4 598 610 251 20 30 chr3LHet 1714720 1714988 -840503 + DNAREP1_DM LINE Penelope 1 390 -204 4 598 21 100 0 0 chr3LHet 1715462 1715532 -839959 + AT_rich Low_complexity Low_complexity 1 70 0 4 598 27 0 0 0 chr3LHet 1716096 1716123 -839368 + AT_rich Low_complexity Low_complexity 1 27 0 4 598 587 238 41 14 chr3LHet 1716900 1717045 -838446 - DMCR1A LINE CR1 -3472 998 850 4 598 26 30 0 0 chr3LHet 1717140 1717173 -838318 + AT_rich Low_complexity Low_complexity 1 33 0 4 598 372 281 7 7 chr3LHet 1717189 1717325 -838166 + DNAREP1_DM LINE Penelope 168 303 -291 4 598 580 216 24 30 chr3LHet 1717321 1717488 -838003 - DNAREP1_DM LINE Penelope -278 316 151 4 598 191 88 0 29 chr3LHet 1717625 1717660 -837831 + (CTATA)n Simple_repeat Simple_repeat 2 35 0 4 598 28 29 0 0 chr3LHet 1718043 1718078 -837413 + AT_rich Low_complexity Low_complexity 1 35 0 4 598 545 96 92 126 chr3LHet 1719126 1719245 -836246 + Gypsy12A_LTR LTR Gypsy 1 115 -2165 4 598 906 92 14 7 chr3LHet 1719243 1719386 -836105 + Gypsy12A_LTR LTR Gypsy 226 369 -1911 4 598 378 167 143 0 chr3LHet 1719416 1719500 -835991 + Gypsy12A_LTR LTR Gypsy 1432 1527 -753 4 598 4111 47 72 29 chr3LHet 1719500 1720211 -835280 + PROTOP DNA P 1 671 -3809 4 598 587 69 0 43 chr3LHet 1720215 1720354 -835137 + PROTOP DNA P 4302 4479 -1 4 598 3872 111 46 71 chr3LHet 1720356 1721133 -834358 + Gypsy12A_LTR LTR Gypsy 1523 2280 0 4 598 237 198 148 65 chr3LHet 1721133 1721232 -834259 - DNAREP1_DM LINE Penelope -275 319 212 4 598 3043 120 25 21 chr3LHet 1721477 1722173 -833318 + Gypsy12A_LTR LTR Gypsy 1595 2290 -46 4 598 30 27 0 0 chr3LHet 1722928 1722965 -832526 + AT_rich Low_complexity Low_complexity 1 37 0 4 598 225 36 0 0 chr3LHet 1723278 1723306 -832185 - P_DG DNA P -109 2779 2752 4 598 606 177 95 0 chr3LHet 1723562 1723709 -831782 + MDG1_I LTR Gypsy 2895 3055 -3541 4 598 21 36 0 0 chr3LHet 1723722 1723750 -831741 + AT_rich Low_complexity Low_complexity 1 28 0 4 598 23 54 0 0 chr3LHet 1724186 1724223 -831268 + AT_rich Low_complexity Low_complexity 1 37 0 4 598 9410 26 0 2 chr3LHet 1726100 1727271 -828220 + TRANSIB2 DNA Transib 1 1169 -1675 4 598 3416 19 21 5 chr3LHet 1727270 1727703 -827788 + TRANSIB2 DNA Transib 2405 2844 0 4 598 845 160 32 110 chr3LHet 1728159 1728405 -827086 + DMLTR5 LTR Gypsy 40 266 0 4 598 1247 121 84 25 chr3LHet 1728419 1728656 -826835 + HMSBEAGLE_I LTR Gypsy 109 359 -6170 4 598 44 20 0 0 chr3LHet 1728667 1728718 -826773 + AT_rich Low_complexity Low_complexity 1 51 0 4 598 27332 141 17 8 chr3LHet 1728880 1733444 -822047 + HMSBEAGLE_I LTR Gypsy 1212 5814 -715 4 598 6871 49 9 26 chr3LHet 1733753 1734742 -820749 - Gypsy7_I LTR Gypsy -4012 972 1 4 598 430 112 67 0 chr3LHet 1734742 1734831 -820660 - Gypsy7_LTR LTR Gypsy 0 251 157 4 598 631 2 129 4 chr3LHet 1734844 1735362 -820129 + (TA)n Simple_repeat Simple_repeat 1 582 0 4 598 2660 39 0 0 chr3LHet 1735362 1735697 -819794 + DM1731_LTR LTR Copia 2 336 0 4 598 1369 0 6 0 chr3LHet 1735697 1735858 -819633 + DM1731_I LTR Copia 1 162 -3814 4 598 15581 12 0 5 chr3LHet 1735958 1737850 -817641 - QUASIMODO_I LTR Gypsy -4177 1883 1 4 598 5655 5 0 0 chr3LHet 1737850 1738507 -816984 - QUASIMODO_LTR LTR Gypsy 0 658 2 4 598 401 103 15 0 chr3LHet 1738507 1738575 -816916 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 598 276 231 0 0 chr3LHet 1738651 1738729 -816762 + (TA)n Simple_repeat Simple_repeat 2 79 0 4 598 22 0 0 0 chr3LHet 1738823 1738845 -816646 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 236 253 90 50 chr3LHet 1738918 1739018 -816473 + DNAREP1_DM LINE Penelope 489 592 -2 4 598 350 149 10 147 chr3LHet 1739257 1739359 -816132 - DNAREP1_DM LINE Penelope -6 588 501 4 598 953 43 11 125 chr3LHet 1739363 1739547 -815944 + S2_DM DNA Tc1 1 163 -1572 4 598 314 173 0 58 chr3LHet 1739573 1739659 -815832 - DNAREP1_DM LINE Penelope -26 568 488 4 598 269 165 117 58 chr3LHet 1739782 1739885 -815606 - Gypsy2_LTR LTR Gypsy -150 203 95 4 598 3941 233 7 40 chr3LHet 1739899 1740890 -814601 - Gypsy2_I LTR Gypsy -91 6044 5087 4 598 240 353 0 0 chr3LHet 1741042 1741144 -814347 - G2_DM LINE Jockey -2720 382 281 4 598 24 32 0 0 chr3LHet 1742098 1742129 -813362 + AT_rich Low_complexity Low_complexity 1 31 0 4 598 245 279 0 0 chr3LHet 1742135 1742203 -813288 + Invader4_I LTR Gypsy 1235 1302 -1111 4 598 1031 337 61 29 chr3LHet 1742282 1743219 -812272 + Invader6_I LTR Gypsy 1629 2595 -1504 4 598 249 278 22 11 chr3LHet 1743635 1743726 -811765 + Invader4_I LTR Gypsy 1783 1874 -539 4 598 491 145 0 0 chr3LHet 1744490 1744572 -810919 + DNAREP1_DM LINE Penelope 304 385 -209 4 598 1699 0 0 0 chr3LHet 1744572 1744770 -810721 + Copia2_LTR_DM LTR Copia 1 198 0 4 598 371 147 577 0 chr3LHet 1744770 1744905 -810586 + DNAREP1_DM LINE Penelope 381 594 0 4 598 25 31 0 0 chr3LHet 1745169 1745201 -810290 + AT_rich Low_complexity Low_complexity 1 32 0 4 598 219 188 0 0 chr3LHet 1745514 1745562 -809929 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 4 598 3253 28 0 0 chr3LHet 1745564 1745957 -809534 - Invader6_LTR LTR Gypsy 0 393 1 4 598 6478 46 21 12 chr3LHet 1745957 1746870 -808621 - Invader6_I LTR Gypsy 0 4099 3219 4 598 16990 12 9 0 chr3LHet 1746861 1748853 -806638 - Invader6_I LTR Gypsy -2089 2010 1 4 598 3291 25 0 0 chr3LHet 1748853 1749246 -806245 - Invader6_LTR LTR Gypsy 0 393 1 4 598 485 125 11 0 chr3LHet 1749246 1749334 -806157 + (TA)n Simple_repeat Simple_repeat 2 90 0 4 598 267 234 0 0 chr3LHet 1749411 1749488 -806003 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 598 22 0 0 0 chr3LHet 1749582 1749604 -805887 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 350 149 10 147 chr3LHet 1750016 1750118 -805373 - DNAREP1_DM LINE Penelope -6 588 501 4 598 1109 43 12 6 chr3LHet 1750122 1750284 -805207 + S2_DM DNA Tc1 1 163 -1572 4 598 347 185 0 36 chr3LHet 1750310 1750394 -805097 - DNAREP1_DM LINE Penelope -26 568 488 4 598 242 194 48 58 chr3LHet 1750516 1750620 -804871 - Gypsy2_LTR LTR Gypsy -156 197 95 4 598 233 286 0 0 chr3LHet 1750634 1750704 -804787 - Gypsy2_I LTR Gypsy -91 6044 5975 4 598 337 224 0 0 chr3LHet 1750713 1750789 -804702 - Gypsy3_I LTR Gypsy -172 6005 5930 4 598 1923 273 8 4 chr3LHet 1750755 1751259 -804232 - Gypsy2_I LTR Gypsy -174 5961 5456 4 598 2410 267 19 10 chr3LHet 1751259 1751962 -803529 - Gypsy6_I LTR Gypsy -1715 5297 4589 4 598 395 96 106 24 chr3LHet 1751967 1752052 -803439 - DNAREP1_DM LINE Penelope -336 258 167 4 598 684 176 216 9 chr3LHet 1752024 1752385 -803106 - DNAREP1_DM LINE Penelope -272 322 5 4 598 379 133 36 12 chr3LHet 1753052 1753136 -802355 - DNAREP1_DM LINE Penelope -256 338 253 4 598 9824 42 58 3 chr3LHet 1753141 1756191 -799300 - DMCR1A LINE CR1 -16 4454 1197 4 598 1794 34 0 0 chr3LHet 1756186 1756424 -799067 - DMCR1A LINE CR1 -4191 279 42 4 598 1161 171 120 0 chr3LHet 1756432 1756706 -798785 - DNAREP1_DM LINE Penelope -287 307 1 4 598 484 161 119 16 chr3LHet 1756703 1756829 -798662 - DNAREP1_DM LINE Penelope -336 258 120 4 598 918 138 84 51 chr3LHet 1756833 1757183 -798308 - DNAREP1_DM LINE Penelope -262 332 86 4 598 23 33 0 0 chr3LHet 1757830 1757860 -797631 + AT_rich Low_complexity Low_complexity 1 30 0 4 598 1890 120 36 16 chr3LHet 1758169 1758580 -796911 + QUASIMODO_LTR LTR Gypsy 1 554 -104 4 598 2255 129 31 10 chr3LHet 1758688 1759102 -796389 - Invader1_LTR LTR Gypsy 0 423 1 4 598 1978 101 10 0 chr3LHet 1759132 1759440 -796051 - Invader1_I LTR Gypsy -158 3028 2718 4 598 25 31 0 0 chr3LHet 1759476 1759508 -795983 + AT_rich Low_complexity Low_complexity 1 32 0 4 598 26 50 0 0 chr3LHet 1759989 1760029 -795462 + AT_rich Low_complexity Low_complexity 1 40 0 4 598 347 217 62 67 chr3LHet 1760189 1760367 -795124 + Gypsy3_LTR LTR Gypsy 109 285 -113 4 598 2464 228 9 8 chr3LHet 1760410 1761041 -794450 + Gypsy_I LTR Gypsy 2363 2994 -3513 4 598 189 0 0 0 chr3LHet 1761041 1761062 -794429 + (T)n Simple_repeat Simple_repeat 1 21 0 4 598 6523 0 0 0 chr3LHet 1761067 1761817 -793674 - FW_DM LINE Jockey -2243 2449 1700 4 598 1974 287 18 4 chr3LHet 1761889 1762565 -792926 + Gypsy_I LTR Gypsy 3147 3831 -2676 4 598 726 272 45 14 chr3LHet 1762585 1762872 -792619 + Gypsy_DS LTR Gypsy 4441 4736 -2786 4 598 38417 19 7 0 chr3LHet 1762868 1767513 -787978 - FW_DM LINE Jockey -13 4679 3 4 598 427 239 27 6 chr3LHet 1767496 1767681 -787810 + BURDOCK_I LTR Gypsy 4146 4480 -2027 4 598 1384 316 36 9 chr3LHet 1767681 1768377 -787114 + GTWIN_I LTR Gypsy 3534 4476 -2053 4 598 5741 20 1 0 chr3LHet 1768371 1769069 -786422 - FW_DM LINE Jockey -13 4679 3981 4 598 28872 25 9 2 chr3LHet 1769078 1772639 -782852 - FW_DM LINE Jockey -1105 3587 3 4 598 1703 314 71 20 chr3LHet 1772638 1773587 -781904 + Gypsy_I LTR Gypsy 4312 5308 -1199 4 598 2960 45 5 0 chr3LHet 1773639 1774016 -781475 - STALKER4_LTR LTR Gypsy -23 379 1 4 598 1069 52 0 0 chr3LHet 1774016 1774169 -781322 - STALKER4_I LTR Gypsy 0 6530 6378 4 598 13423 146 48 40 chr3LHet 1774178 1777159 -778332 - Stalker2_I LTR Gypsy -301 6295 3325 4 598 18427 55 24 24 chr3LHet 1777153 1779762 -775729 - STALKER4_I LTR Gypsy -3504 3026 163 4 598 28 48 0 0 chr3LHet 1779769 1779811 -775680 + AT_rich Low_complexity Low_complexity 1 42 0 4 598 2987 61 0 0 chr3LHet 1779915 1780290 -775201 - STALKER4_LTR LTR Gypsy -27 375 1 4 598 1258 332 45 51 chr3LHet 1780392 1781472 -774019 + Gypsy_I LTR Gypsy 5447 6922 -600 4 598 26 50 0 0 chr3LHet 1781537 1781577 -773914 + AT_rich Low_complexity Low_complexity 1 40 0 4 598 47 0 0 0 chr3LHet 1781724 1781771 -773720 + AT_rich Low_complexity Low_complexity 1 47 0 4 598 21 57 0 0 chr3LHet 1782391 1782426 -773065 + AT_rich Low_complexity Low_complexity 1 35 0 4 598 24 0 0 0 chr3LHet 1783636 1783660 -771831 + AT_rich Low_complexity Low_complexity 1 24 0 4 598 648 299 68 23 chr3LHet 1784948 1785595 -769896 - DM176_I LTR Gypsy -2298 3562 3027 4 598 1559 33 19 0 chr3LHet 1785523 1785737 -769754 - TLD2 Unknown Unknown 0 218 1 4 598 337 307 0 0 chr3LHet 1785668 1785769 -769722 - Gypsy_DS LTR Gypsy -4187 3335 3235 4 598 380 316 15 15 chr3LHet 1787486 1787715 -767776 - DM176_I LTR Gypsy -4868 992 850 4 598 47 0 0 0 chr3LHet 1788761 1788808 -766683 + AT_rich Low_complexity Low_complexity 1 47 0 4 598 432 247 53 83 chr3LHet 1789298 1789563 -765928 + Gypsy3_LTR LTR Gypsy 112 368 -30 4 598 7536 295 25 13 chr3LHet 1790457 1793767 -761724 + Gypsy_I LTR Gypsy 916 4666 -2856 4 598 1170 283 13 13 chr3LHet 1793759 1794138 -761353 + GTWIN_I LTR Gypsy 4284 4662 -1759 4 598 1697 334 39 45 chr3LHet 1794191 1795476 -760015 + Gypsy_I LTR Gypsy 5243 6922 -600 4 598 26 50 0 0 chr3LHet 1795541 1795581 -759910 + AT_rich Low_complexity Low_complexity 1 40 0 4 598 293 217 151 75 chr3LHet 1795743 1795982 -759509 + Gypsy3_LTR LTR Gypsy 112 368 -30 4 598 6275 314 32 27 chr3LHet 1796043 1799101 -756390 - MICROPIA_I LTR Gypsy -632 3844 772 4 598 1262 331 24 19 chr3LHet 1799136 1799759 -755732 - MICROPIA_I LTR Gypsy -3850 626 1 4 598 198 0 0 0 chr3LHet 1799765 1799787 -755704 + (TTC)n Simple_repeat Simple_repeat 1 22 0 4 598 1659 138 30 3 chr3LHet 1799827 1800124 -755367 - Invader1_LTR LTR Gypsy -118 305 1 4 598 283 193 11 74 chr3LHet 1800385 1800480 -755011 + (CAA)n Simple_repeat Simple_repeat 2 90 0 4 598 3001 282 96 48 chr3LHet 1800501 1802739 -752752 + QUASIMODO_I LTR Gypsy 448 2793 -3267 4 598 2373 257 51 24 chr3LHet 1802772 1804094 -751397 + QUASIMODO_I LTR Gypsy 3247 4705 -1355 4 598 687 176 0 0 chr3LHet 1804180 1804316 -751175 + QUASIMODO_I LTR Gypsy 5141 5276 -784 4 598 835 235 34 0 chr3LHet 1804360 1804594 -750897 + QUASIMODO_I LTR Gypsy 5506 5747 -313 4 598 23 0 0 0 chr3LHet 1804594 1804617 -750874 + AT_rich Low_complexity Low_complexity 1 23 0 4 598 225 0 0 0 chr3LHet 1804617 1804642 -750849 + (TAA)n Simple_repeat Simple_repeat 1 25 0 4 598 642 181 57 117 chr3LHet 1804826 1805057 -750434 + Gypsy8_LTR LTR Gypsy 1 304 0 4 598 345 157 122 11 chr3LHet 1805377 1805467 -750024 - DNAREP1_DM LINE Penelope -323 271 172 4 598 879 178 27 46 chr3LHet 1805467 1805795 -749696 - DNAREP1_DM LINE Penelope -264 330 86 4 598 2801 55 222 2 chr3LHet 1805815 1806270 -749221 - IDEFIX_LTR LTR Gypsy 0 594 40 4 598 41884 46 17 23 chr3LHet 1806268 1811893 -743598 - IDEFIX_I LTR Gypsy -37 5591 1 4 598 25 0 0 0 chr3LHet 1812208 1812233 -743258 + AT_rich Low_complexity Low_complexity 1 25 0 4 598 3152 3 0 0 chr3LHet 1812430 1812776 -742715 + Invader4_LTR LTR Gypsy 1 346 0 4 598 8277 2 0 0 chr3LHet 1812776 1813681 -741810 + Invader4_I LTR Gypsy 1 905 -1508 4 598 11653 5 22 0 chr3LHet 1813681 1815014 -740477 + Invader4_I LTR Gypsy 1052 2413 0 4 598 3152 3 0 0 chr3LHet 1815014 1815360 -740131 + Invader4_LTR LTR Gypsy 1 346 0 4 598 4080 43 7 11 chr3LHet 1815360 1815901 -739590 - IDEFIX_LTR LTR Gypsy -16 578 40 4 598 3302 39 2 2 chr3LHet 1815899 1816337 -739154 - IDEFIX_I LTR Gypsy -37 5591 5154 4 598 310 100 0 0 chr3LHet 1816332 1816392 -739099 - IDEFIX_I LTR Gypsy -385 5243 5184 4 598 3329 26 55 0 chr3LHet 1816417 1816833 -738658 - IDEFIX_LTR LTR Gypsy -155 439 1 4 598 255 125 0 0 chr3LHet 1816801 1816841 -738650 + BARI1 DNA Tc1 3 42 -1708 4 598 760 150 196 12 chr3LHet 1816841 1817101 -738390 - FW_DM LINE Jockey -11 4681 4374 4 598 2050 194 49 2 chr3LHet 1817110 1817588 -737903 - FW_DM LINE Jockey -577 4115 3795 4 598 4180 158 138 36 chr3LHet 1817589 1818969 -736522 - FW_DM LINE Jockey -2275 2518 824 4 598 414 92 0 30 chr3LHet 1818981 1819048 -736443 - FW_DM LINE Jockey -4525 167 103 4 598 26 64 0 0 chr3LHet 1819543 1819590 -735901 + AT_rich Low_complexity Low_complexity 1 47 0 4 598 452 277 63 45 chr3LHet 1819833 1820056 -735435 - GTWIN_I LTR Gypsy -2997 3424 3125 4 598 1702 271 2 2 chr3LHet 1820106 1820565 -734926 + Copia2_I LTR Copia 2457 2915 -1247 4 598 11842 38 30 1 chr3LHet 1820565 1822183 -733308 + TC1_DM DNA Tc1 1 1666 0 4 598 1476 259 70 2 chr3LHet 1822195 1822636 -732855 + Copia2_I LTR Copia 2930 3400 -762 4 598 2251 238 46 2 chr3LHet 1822638 1823185 -732306 + Copia2_I LTR Copia 3507 4077 -85 4 598 4014 45 12 0 chr3LHet 1823315 1823807 -731684 - Baggins1 LINE LOA -1158 4295 3798 4 598 14332 46 87 0 chr3LHet 1823814 1826082 -729409 - Baggins1 LINE LOA -1922 3531 1069 4 598 2703 36 258 9 chr3LHet 1826071 1826493 -728998 - Baggins1 LINE LOA -4701 752 226 4 598 212 137 20 0 chr3LHet 1826855 1826906 -728585 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 598 432 124 39 55 chr3LHet 1826909 1827037 -728454 - FW_DM LINE Jockey -8 4684 4559 4 598 350 146 0 0 chr3LHet 1827010 1827065 -728426 - FW_DM LINE Jockey -251 4441 4387 4 598 6125 137 25 6 chr3LHet 1827096 1828091 -727400 - FW_DM LINE Jockey -577 4115 3102 4 598 2124 238 0 0 chr3LHet 1828089 1828581 -726910 - Gypsy5_I LTR Gypsy -1782 4727 4236 4 598 3587 167 124 34 chr3LHet 1828563 1829411 -726080 - Gypsy5_I LTR Gypsy -2624 3885 2961 4 598 4822 223 53 11 chr3LHet 1829421 1830596 -724895 - Gypsy5_I LTR Gypsy -4039 2470 1247 4 598 286 169 217 43 chr3LHet 1830631 1830792 -724699 - Transib-N1_DM DNA Transib -189 325 137 4 598 34 55 0 0 chr3LHet 1831016 1831071 -724420 + AT_rich Low_complexity Low_complexity 1 55 0 4 598 33 0 0 0 chr3LHet 1831142 1831175 -724316 + AT_rich Low_complexity Low_complexity 1 33 0 4 598 583 164 9 0 chr3LHet 1831232 1831342 -724149 - Transib-N1_DM DNA Transib -403 111 1 4 598 563 282 19 33 chr3LHet 1831459 1831672 -723819 + GTWIN_I LTR Gypsy 1395 1604 -4817 4 598 3628 190 64 11 chr3LHet 1831662 1832413 -723078 + GTWIN_I LTR Gypsy 1920 2710 -3711 4 598 1564 203 149 3 chr3LHet 1832411 1832795 -722696 + GTWIN_I LTR Gypsy 2881 3383 -3038 4 598 1364 44 0 16 chr3LHet 1832789 1832972 -722519 + IDEFIX_I LTR Gypsy 5449 5628 0 4 598 3218 53 204 2 chr3LHet 1832972 1833466 -722025 + IDEFIX_LTR LTR Gypsy 1 594 0 4 598 915 182 22 76 chr3LHet 1833480 1833815 -721676 + DNAREP1_DM LINE Penelope 59 325 -269 4 598 324 159 135 11 chr3LHet 1833815 1833904 -721587 + DNAREP1_DM LINE Penelope 172 271 -323 4 598 2468 0 0 0 chr3LHet 1834014 1834290 -721201 + Copia_LTR LTR Copia 1 276 0 4 74 41929 0 0 3 chr3LHet 1834290 1838895 -716596 + Copia_I LTR Copia 1 4593 0 4 599 2468 0 0 0 chr3LHet 1838895 1839171 -716320 + Copia_LTR LTR Copia 1 276 0 4 599 658 181 57 117 chr3LHet 1839386 1839617 -715874 - Gypsy8_LTR LTR Gypsy 0 304 1 4 599 198 0 0 0 chr3LHet 1839799 1839821 -715670 + (TTA)n Simple_repeat Simple_repeat 1 22 0 4 599 23 0 0 0 chr3LHet 1839821 1839844 -715647 + AT_rich Low_complexity Low_complexity 1 23 0 4 599 863 228 50 16 chr3LHet 1839844 1840102 -715389 - TV1I LTR Gypsy -313 5747 5481 4 599 714 183 18 0 chr3LHet 1840122 1840275 -715216 - TV1I LTR Gypsy -784 5276 5141 4 599 4320 251 97 42 chr3LHet 1840344 1844152 -711339 - TV1I LTR Gypsy -1355 4705 657 4 599 1547 174 5 80 chr3LHet 1844203 1844592 -710899 - Gypsy12A_LTR LTR Gypsy -835 1445 1032 4 599 274 127 154 31 chr3LHet 1844600 1844665 -710826 - Gypsy12A_LTR LTR Gypsy -1396 884 812 4 599 908 35 0 9 chr3LHet 1844675 1844789 -710702 - TC1_DM DNA Tc1 0 1666 1554 4 599 317 170 187 29 chr3LHet 1844796 1844935 -710556 - Gypsy12A_LTR LTR Gypsy -1482 798 638 4 599 5316 66 49 44 chr3LHet 1844936 1845747 -709744 + PROTOP_B DNA P 4 818 -335 4 599 670 154 66 7 chr3LHet 1845742 1845879 -709612 - DNAREP1_DM LINE Penelope -262 332 188 4 599 1086 96 42 0 chr3LHet 1846005 1846171 -709320 - Invader2_I LTR Gypsy -3217 1375 1203 4 599 2492 118 15 4 chr3LHet 1846167 1846592 -708899 - Invader2_I LTR Gypsy -3492 1100 620 4 599 1265 172 17 53 chr3LHet 1846592 1846892 -708599 + Gypsy5_LTR LTR Gypsy 1 289 -141 4 599 344 96 19 37 chr3LHet 1847033 1847087 -708404 + Gypsy5_I LTR Gypsy 1 53 -6456 4 599 9399 18 25 0 chr3LHet 1847312 1848390 -707101 + PROTOP_A DNA P 1 1105 0 4 599 281 168 45 98 chr3LHet 1849140 1849252 -706239 + Gypsy5_I LTR Gypsy 38 143 -6366 4 599 3573 18 0 0 chr3LHet 1849252 1849645 -705846 - Invader6_LTR LTR Gypsy 0 393 1 4 599 28409 60 12 3 chr3LHet 1849645 1854133 -701358 - Invader6_I LTR Gypsy 0 4099 1 4 599 3573 18 0 0 chr3LHet 1854133 1854526 -700965 - Invader6_LTR LTR Gypsy 0 393 1 4 599 28466 59 13 3 chr3LHet 1854526 1859013 -696478 - Invader6_I LTR Gypsy 0 4099 1 4 599 3573 18 0 0 chr3LHet 1859013 1859406 -696085 - Invader6_LTR LTR Gypsy 0 393 1 4 599 26832 92 18 11 chr3LHet 1859406 1863725 -691766 - Invader6_I LTR Gypsy 0 4099 167 4 599 4359 179 44 0 chr3LHet 1863710 1864556 -690935 + Gypsy5_I LTR Gypsy 4386 5268 -1241 4 599 1772 147 0 0 chr3LHet 1864555 1864861 -690630 + Gypsy5_I LTR Gypsy 5589 5894 -615 4 599 799 141 8 0 chr3LHet 1864863 1864984 -690507 + Gypsy5_I LTR Gypsy 6388 6509 0 4 599 1294 169 17 53 chr3LHet 1864984 1865284 -690207 + Gypsy5_LTR LTR Gypsy 1 289 -141 4 599 335 214 143 70 chr3LHet 1865425 1865724 -689767 - Invader2_I LTR Gypsy -3969 623 305 4 599 556 151 23 98 chr3LHet 1865933 1866065 -689426 - Gypsy5_LTR LTR Gypsy -232 198 77 4 599 5193 237 35 4 chr3LHet 1866084 1867330 -688161 - Gypsy5_I LTR Gypsy 0 6509 5226 4 599 3525 226 0 8 chr3LHet 1867330 1868091 -687400 - Gypsy5_I LTR Gypsy -1519 4990 4236 4 599 3272 170 171 35 chr3LHet 1868073 1868887 -686604 - Gypsy5_I LTR Gypsy -2624 3885 2961 4 599 4870 214 43 6 chr3LHet 1868894 1869968 -685523 - Gypsy5_I LTR Gypsy -4036 2473 1359 4 599 180 0 0 0 chr3LHet 1869968 1869988 -685503 + (TTA)n Simple_repeat Simple_repeat 3 22 0 4 599 3000 239 120 11 chr3LHet 1870024 1870959 -684532 - Gypsy5_I LTR Gypsy -5227 1282 246 4 599 189 0 0 0 chr3LHet 1871514 1871535 -683956 + (T)n Simple_repeat Simple_repeat 1 21 0 4 599 699 143 23 110 chr3LHet 1871535 1871708 -683783 - Gypsy5_LTR LTR Gypsy -196 234 77 4 599 1203 129 328 56 chr3LHet 1871777 1872105 -683386 - Invader2_I LTR Gypsy -4176 416 1 4 599 1128 158 39 103 chr3LHet 1872105 1872387 -683104 - Invader2_LTR LTR Gypsy 0 266 3 4 599 29 0 0 0 chr3LHet 1872968 1872997 -682494 + AT_rich Low_complexity Low_complexity 1 29 0 4 599 236 333 77 28 chr3LHet 1873709 1873891 -681600 + DIVER_I LTR Pao 711 901 -4742 4 599 338 349 33 7 chr3LHet 1873920 1874073 -681418 + DIVER_I LTR Pao 1088 1244 -4399 4 599 267 268 0 0 chr3LHet 1874230 1874301 -681190 + DIVER_I LTR Pao 1473 1543 -4100 4 599 18724 30 12 0 chr3LHet 1874577 1876741 -678750 - DOC3_DM LINE Jockey 0 4740 2552 4 599 3193 54 5 14 chr3LHet 1876721 1877136 -678355 - DOC3_DM LINE Jockey -2734 2006 1596 4 599 1316 19 0 25 chr3LHet 1877134 1877292 -678199 - DOC3_DM LINE Jockey -3247 1493 1340 4 599 30507 6 2 0 chr3LHet 1877419 1881479 -674012 + DMRT1B LINE R1 1064 5183 0 4 599 21732 6 15 0 chr3LHet 1881492 1883907 -671584 + DMRT1B LINE R1 2733 5183 0 4 599 13464 39 17 0 chr3LHet 1884007 1884148 -671343 + DMRT1B LINE R1 1 141 -5042 4 599 180 0 0 0 chr3LHet 1884148 1884168 -671323 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 4 599 13464 39 17 0 chr3LHet 1884168 1885647 -669844 + DMRT1B LINE R1 142 1647 -3536 4 599 17427 30 1 1 chr3LHet 1885639 1887658 -667833 + DMRT1B LINE R1 1835 3853 -1330 4 599 3488 37 47 0 chr3LHet 1887662 1888090 -667401 + DMRT1B LINE R1 4736 5183 0 4 599 2422 51 156 2 chr3LHet 1888090 1888559 -666932 - DOC3_DM LINE Jockey -3387 1353 813 4 599 3978 45 2 0 chr3LHet 1888566 1889077 -666414 - DOC3_DM LINE Jockey -4218 522 11 4 599 377 70 338 0 chr3LHet 1889626 1889697 -665794 - DNAREP1_DM LINE Penelope 0 594 500 4 599 907 183 89 97 chr3LHet 1889699 1890069 -665422 - ROVER-LTR_DM LTR Gypsy 0 367 1 4 599 1548 154 110 30 chr3LHet 1890069 1890632 -664859 - DNAREP1_DM LINE Penelope -107 487 1 4 599 370 320 0 17 chr3LHet 1893081 1893262 -662229 + Gypsy12_I LTR Gypsy 3165 3342 -2204 4 599 8824 29 1 0 chr3LHet 1893856 1894960 -660531 - PROTOP_A DNA P 0 1105 1 4 599 1941 28 0 4 chr3LHet 1894960 1895208 -660283 + NINJA_I LTR Pao 5469 5715 -296 4 599 1102 8 0 0 chr3LHet 1895212 1895340 -660151 - PROTOP_A DNA P -977 128 1 4 599 232 310 48 43 chr3LHet 1895728 1895937 -659554 + Gypsy12_I LTR Gypsy 4907 5116 -430 4 599 2336 94 80 5 chr3LHet 1895957 1896330 -659161 + MICROPIA_I LTR Gypsy 2027 2427 -2049 4 599 986 112 383 35 chr3LHet 1896329 1896584 -658907 + MICROPIA_I LTR Gypsy 2652 2995 -1481 4 599 1220 42 0 6 chr3LHet 1896584 1896750 -658741 + DMCR1A LINE CR1 1 165 -4305 4 599 9784 155 19 9 chr3LHet 1896756 1898934 -656557 - HELENA_RT LINE Jockey 0 1317 77 4 599 2041 299 8 6 chr3LHet 1898955 1899664 -655827 - BS LINE Jockey -2393 2733 2023 4 599 246 243 14 0 chr3LHet 1899702 1899772 -655719 + DIVER2_I LTR Pao 3058 3128 -1019 4 599 892 305 95 17 chr3LHet 1899775 1900185 -655306 + DIVER2_I LTR Pao 3432 3873 -274 4 599 289 289 11 0 chr3LHet 1900628 1900718 -654773 + BATUMI_I LTR Pao 6166 6256 -1707 4 599 337 280 17 0 chr3LHet 1901615 1901733 -653758 + DMCR1A LINE CR1 3575 3694 -776 4 599 258 278 51 10 chr3LHet 1901747 1901845 -653646 + DMCR1A LINE CR1 3753 3854 -616 4 599 26 82 0 0 chr3LHet 1901997 1902058 -653433 + AT_rich Low_complexity Low_complexity 1 61 0 4 599 1104 34 216 16 chr3LHet 1902614 1902915 -652576 + DMCR1A LINE CR1 2 362 -4108 4 599 9758 46 5 0 chr3LHet 1902953 1904188 -651303 - HELENA_RT LINE Jockey 0 1317 77 4 599 1236 337 16 37 chr3LHet 1904193 1904943 -650548 - BS LINE Jockey -1526 3600 2867 4 599 1033 288 14 9 chr3LHet 1904964 1905314 -650177 - BS LINE Jockey -2393 2733 2382 4 599 591 317 4 4 chr3LHet 1905316 1905547 -649944 - BS LINE Jockey -2873 2253 2023 4 599 246 243 14 0 chr3LHet 1905585 1905655 -649836 + DIVER2_I LTR Pao 3058 3128 -1019 4 599 892 305 95 17 chr3LHet 1905658 1906068 -649423 + DIVER2_I LTR Pao 3432 3873 -274 4 599 337 280 17 0 chr3LHet 1907498 1907616 -647875 + DMCR1A LINE CR1 3575 3694 -776 4 599 258 278 51 10 chr3LHet 1907630 1907728 -647763 + DMCR1A LINE CR1 3753 3854 -616 4 599 26 82 0 0 chr3LHet 1907880 1907941 -647550 + AT_rich Low_complexity Low_complexity 1 61 0 4 599 870 287 4 4 chr3LHet 1921491 1921760 -633731 + Gypsy6_I LTR Gypsy 6572 6840 -172 4 599 233 286 0 0 chr3LHet 1921771 1921841 -633650 + Gypsy2_I LTR Gypsy 5975 6044 -91 4 599 264 184 48 58 chr3LHet 1921855 1921959 -633532 + Gypsy2_LTR LTR Gypsy 95 197 -156 4 599 314 173 0 58 chr3LHet 1922081 1922167 -633324 + DNAREP1_DM LINE Penelope 488 568 -26 4 599 1085 50 12 6 chr3LHet 1922193 1922355 -633136 - S2_DM DNA Tc1 -1572 163 1 4 599 365 138 10 147 chr3LHet 1922359 1922461 -633030 + DNAREP1_DM LINE Penelope 501 588 -6 4 599 22 0 0 0 chr3LHet 1922873 1922895 -632596 + AT_rich Low_complexity Low_complexity 1 22 0 4 599 237 232 0 0 chr3LHet 1922997 1923066 -632425 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 599 422 88 15 0 chr3LHet 1923143 1923211 -632280 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 599 5220 2 50 0 chr3LHet 1923211 1923837 -631654 + QUASIMODO_LTR LTR Gypsy 2 658 0 4 599 3074 5 0 26 chr3LHet 1923837 1924214 -631277 + QUASIMODO_I LTR Gypsy 1 367 -5693 4 599 6065 69 67 6 chr3LHet 1924215 1925114 -630377 + DMCR1A LINE CR1 3198 4151 -319 4 599 472 56 0 0 chr3LHet 1925111 1925182 -630309 + DMCR1A LINE CR1 4288 4358 -112 4 599 1991 83 57 0 chr3LHet 1925196 1925497 -629994 + MICROPIA_I LTR Gypsy 2981 3298 -1178 4 599 1549 107 183 10 chr3LHet 1925498 1925810 -629681 + MICROPIA_I LTR Gypsy 3648 4013 -463 4 599 299 326 13 13 chr3LHet 1926002 1926151 -629340 - G2_DM LINE Jockey -200 2902 2754 4 599 987 305 56 39 chr3LHet 1926371 1927124 -628367 - G2_DM LINE Jockey -588 2514 1749 4 599 232 317 14 14 chr3LHet 1928242 1928389 -627102 - TAHRE LINE telomeric -7890 2573 2427 4 599 254 302 30 30 chr3LHet 1928265 1928398 -627093 - G_DM LINE Jockey -3179 1167 1035 4 599 2490 112 8 75 chr3LHet 1928919 1929440 -626051 + MICROPIA_I LTR Gypsy 3991 4476 0 4 599 760 153 0 14 chr3LHet 1929445 1929584 -625907 + MICROPIA_LTR LTR Gypsy 96 232 -244 4 599 301 213 0 16 chr3LHet 1929653 1929715 -625776 + MICROPIA_LTR LTR Gypsy 416 476 0 4 599 364 297 41 6 chr3LHet 1929741 1929962 -625529 - Gypsy5_I LTR Gypsy -1971 4538 4337 4 599 569 244 0 0 chr3LHet 1930292 1930411 -625080 + FW_DM LINE Jockey 1856 1974 -2718 4 599 2491 100 2 28 chr3LHet 1930450 1930872 -624619 + M4DM DNA Transib 1 411 -1024 4 599 320 301 16 16 chr3LHet 1930806 1931023 -624468 - TRANSIB2 DNA Transib -425 2419 2263 4 599 286 295 60 70 chr3LHet 1931268 1931552 -623939 - TRANSIB2 DNA Transib -871 1973 1693 4 599 228 234 78 0 chr3LHet 1931642 1931719 -623772 - TRANSIB1 DNA Transib -1442 1572 1490 4 599 6469 96 12 14 chr3LHet 1932223 1933247 -622244 + M4DM DNA Transib 406 1427 -8 4 599 569 244 0 0 chr3LHet 1933599 1933718 -621773 + FW_DM LINE Jockey 1856 1974 -2718 4 599 2545 97 0 31 chr3LHet 1933757 1934181 -621310 + M4DM DNA Transib 1 411 -1024 4 599 323 304 15 15 chr3LHet 1934107 1934332 -621159 - TRANSIB2 DNA Transib -417 2427 2263 4 599 286 295 60 70 chr3LHet 1934577 1934861 -620630 - TRANSIB2 DNA Transib -871 1973 1693 4 599 228 234 78 0 chr3LHet 1934951 1935028 -620463 - TRANSIB1 DNA Transib -1442 1572 1490 4 599 6485 95 12 14 chr3LHet 1935532 1936556 -618935 + M4DM DNA Transib 406 1427 -8 4 599 569 244 0 0 chr3LHet 1936908 1937027 -618464 + FW_DM LINE Jockey 1856 1974 -2718 4 599 2545 97 0 31 chr3LHet 1937066 1937490 -618001 + M4DM DNA Transib 1 411 -1024 4 599 323 304 15 15 chr3LHet 1937416 1937641 -617850 - TRANSIB2 DNA Transib -417 2427 2263 4 599 314 292 60 70 chr3LHet 1937886 1938170 -617321 - TRANSIB2 DNA Transib -871 1973 1693 4 599 1265 87 0 0 chr3LHet 1938226 1938409 -617082 + M4DM DNA Transib 1253 1435 0 4 599 259 252 69 69 chr3LHet 1938443 1938618 -616873 - MAX_LTR LTR Pao -29 292 118 4 599 2799 189 91 56 chr3LHet 1938644 1939399 -616092 - MAX_I LTR Pao -132 7782 7001 4 599 302 171 100 0 chr3LHet 1939502 1939570 -615921 - MAX_I LTR Pao -1841 6073 5999 4 599 1511 183 156 78 chr3LHet 1939570 1940121 -615370 - DNAREP1_DM LINE Penelope 0 594 1 4 599 624 148 73 69 chr3LHet 1940525 1940777 -614714 - DNAREP1_DM LINE Penelope -262 332 110 4 599 209 160 38 51 chr3LHet 1940781 1940860 -614631 + (TTATA)n Simple_repeat Simple_repeat 1 78 0 4 599 469 216 110 31 chr3LHet 1941414 1941605 -613886 + Invader3_LTR LTR Gypsy 1 206 -92 4 599 889 253 48 17 chr3LHet 1941610 1941900 -613591 + Invader3_I LTR Gypsy 3 301 -4587 4 599 1285 233 184 0 chr3LHet 1941917 1942425 -613066 + Invader3_I LTR Gypsy 383 983 -3905 4 599 543 173 0 0 chr3LHet 1942422 1942526 -612965 + HOBO DNA hAT 23 126 -2890 4 599 47 0 0 0 chr3LHet 1942540 1942587 -612904 + AT_rich Low_complexity Low_complexity 1 47 0 4 599 2871 158 142 23 chr3LHet 1943175 1943951 -611540 + Invader3_I LTR Gypsy 3875 4742 -146 4 599 523 200 8 23 chr3LHet 1944010 1944138 -611353 + Invader3_LTR LTR Gypsy 89 214 -84 4 599 328 246 173 19 chr3LHet 1944245 1944525 -610966 - QUASIMODO_I LTR Gypsy -3052 3008 2685 4 599 898 285 50 32 chr3LHet 1944529 1944932 -610559 - TOM_I LTR Gypsy -3352 2760 2351 4 599 259 119 0 0 chr3LHet 1945622 1945664 -609827 + DNAREP1_DM LINE Penelope 1 42 -552 4 599 407 121 0 0 chr3LHet 1945729 1945795 -609696 + DNAREP1_DM LINE Penelope 529 594 0 4 599 295 234 107 23 chr3LHet 1945773 1945904 -609587 + IDEFIX_I LTR Gypsy 3947 4088 -1540 4 599 411 259 17 12 chr3LHet 1946009 1946181 -609310 + TV1I LTR Gypsy 4627 4799 -1164 4 599 282 143 32 0 chr3LHet 1946368 1946431 -609060 - TIRANT_LTR LTR Gypsy -352 65 1 4 599 11041 169 64 28 chr3LHet 1946431 1948775 -606716 - TIRANT_I LTR Gypsy 0 7692 5266 4 599 7574 47 38 3 chr3LHet 1948775 1949804 -605687 + PROTOP_A DNA P 1 1065 -40 4 599 2558 43 3 0 chr3LHet 1949804 1950149 -605342 + TRANSIB2 DNA Transib 1 346 -2498 4 599 1279 13 0 0 chr3LHet 1950146 1950299 -605192 + TRANSIB2 DNA Transib 2692 2844 0 4 599 351 0 0 0 chr3LHet 1950299 1950341 -605150 + PROTOP_A DNA P 1062 1104 -1 4 599 5578 151 0 1 chr3LHet 1950341 1951259 -604232 - TIRANT_I LTR Gypsy -2420 5272 4356 4 599 5846 152 31 1 chr3LHet 1951261 1952959 -602532 - TIRANT_I LTR Gypsy -3549 4143 2395 4 599 1158 145 0 0 chr3LHet 1952954 1953133 -602358 - TIRANT_I LTR Gypsy -5684 2008 1830 4 599 1196 198 11 22 chr3LHet 1953124 1953392 -602099 - TIRANT_I LTR Gypsy -6034 1658 1394 4 599 1814 64 0 12 chr3LHet 1953482 1953736 -601755 - Gypsy7_LTR LTR Gypsy 0 251 1 4 599 878 28 0 0 chr3LHet 1953736 1953842 -601649 - Gypsy7_I LTR Gypsy 0 4984 4879 4 599 707 79 0 45 chr3LHet 1953984 1954116 -601375 - Gypsy7_I LTR Gypsy -109 4875 4750 4 599 19954 60 64 20 chr3LHet 1954095 1957047 -598444 - Gypsy7_I LTR Gypsy -563 4421 1342 4 599 8122 45 50 42 chr3LHet 1957040 1958259 -597232 - Gypsy7_I LTR Gypsy -3755 1229 1 4 599 1761 76 0 12 chr3LHet 1958259 1958512 -596979 - Gypsy7_LTR LTR Gypsy 0 251 2 4 599 1110 41 0 299 chr3LHet 1958512 1958823 -596668 - Gypsy7_I LTR Gypsy 0 4984 4767 4 599 9518 53 87 23 chr3LHet 1958849 1960264 -595227 - Gypsy7_I LTR Gypsy -566 4418 2914 4 599 35058 3 1 0 chr3LHet 1960270 1964369 -591122 - DOC LINE Jockey 0 4725 625 4 599 10392 67 41 22 chr3LHet 1964375 1965924 -589567 - Gypsy7_I LTR Gypsy -2064 2920 1342 4 74 8552 47 21 41 chr3LHet 1965917 1967170 -588321 - Gypsy7_I LTR Gypsy -3755 1229 1 4 600 1761 76 0 12 chr3LHet 1967170 1967423 -588068 - Gypsy7_LTR LTR Gypsy 0 251 2 4 600 598 55 165 0 chr3LHet 1967423 1967514 -587977 - Gypsy7_I LTR Gypsy 0 4984 4879 4 600 707 79 0 45 chr3LHet 1967609 1967741 -587750 - Gypsy7_I LTR Gypsy -109 4875 4750 4 600 20040 59 64 20 chr3LHet 1967720 1970672 -584819 - Gypsy7_I LTR Gypsy -563 4421 1342 4 600 8585 47 21 41 chr3LHet 1970665 1971919 -583572 - Gypsy7_I LTR Gypsy -3755 1229 1 4 600 1761 76 0 12 chr3LHet 1971919 1972172 -583319 - Gypsy7_LTR LTR Gypsy 0 251 2 4 600 878 28 0 0 chr3LHet 1972172 1972278 -583213 - Gypsy7_I LTR Gypsy 0 4984 4879 4 600 707 79 0 45 chr3LHet 1972373 1972505 -582986 - Gypsy7_I LTR Gypsy -109 4875 4750 4 600 20014 60 63 20 chr3LHet 1972484 1975437 -580054 - Gypsy7_I LTR Gypsy -563 4421 1342 4 600 8640 45 21 41 chr3LHet 1975430 1976684 -578807 - Gypsy7_I LTR Gypsy -3755 1229 1 4 600 1547 72 67 13 chr3LHet 1976684 1976922 -578569 - Gypsy7_LTR LTR Gypsy 0 251 1 4 600 709 217 43 63 chr3LHet 1976936 1977237 -578254 - TIRANT_I LTR Gypsy -6830 862 445 4 600 347 125 16 0 chr3LHet 1977483 1977547 -577944 - TIRANT_LTR LTR Gypsy -352 65 1 4 600 1074 199 73 13 chr3LHet 1977549 1977865 -577626 + BEL_LTR LTR Pao 27 361 0 4 600 22 35 0 0 chr3LHet 1978756 1978785 -576706 + AT_rich Low_complexity Low_complexity 1 29 0 4 600 232 51 32 48 chr3LHet 1978809 1978871 -576620 + (TTATA)n Simple_repeat Simple_repeat 4 64 0 4 600 2693 45 5 16 chr3LHet 1979227 1979607 -575884 + LOOPER1_DM DNA PiggyBac 1506 1881 0 4 600 518 220 113 60 chr3LHet 1980308 1980608 -574883 - NINJA_LTR LTR Pao -1 316 1 4 600 1035 138 33 0 chr3LHet 1980608 1980789 -574702 - NINJA_I LTR Pao 0 6011 5825 4 600 2499 81 62 3 chr3LHet 1980794 1981165 -574326 - NINJA_I LTR Pao -313 5698 5306 4 600 9214 93 41 3 chr3LHet 1981168 1982604 -572887 - NINJA_I LTR Pao -1040 4971 3146 4 600 273 0 0 0 chr3LHet 1982612 1982644 -572847 - NINJA_I LTR Pao -3204 2807 2776 4 600 2025 129 118 0 chr3LHet 1982642 1983101 -572390 - NINJA_I LTR Pao -3337 2674 2162 4 600 1191 287 14 6 chr3LHet 1983785 1984142 -571349 + Gypsy4_I LTR Gypsy 2530 2889 -3399 4 600 13830 53 25 11 chr3LHet 1984141 1986008 -569483 - DMCR1A LINE CR1 -2571 1899 7 4 600 676 250 75 0 chr3LHet 1986010 1986198 -569293 + Gypsy4_I LTR Gypsy 2906 3107 -3181 4 600 1125 254 130 20 chr3LHet 1986200 1986738 -568753 + Gypsy4_I LTR Gypsy 3351 3947 -2341 4 600 238 338 40 47 chr3LHet 1986740 1986889 -568602 + BURDOCK_I LTR Gypsy 4401 4548 -1312 4 600 23 0 0 0 chr3LHet 1986889 1986912 -568579 + AT_rich Low_complexity Low_complexity 1 23 0 4 600 2879 3 0 0 chr3LHet 1986912 1987242 -568249 + TRANSPAC_LTR LTR Gypsy 1 330 0 4 600 38684 2 0 0 chr3LHet 1987242 1991831 -563660 + TRANSPAC_I LTR Gypsy 1 4590 0 4 600 2853 6 0 0 chr3LHet 1991830 1992160 -563331 + TRANSPAC_LTR LTR Gypsy 1 330 0 4 600 22 35 0 0 chr3LHet 1992399 1992428 -563063 + AT_rich Low_complexity Low_complexity 1 29 0 4 600 532 45 0 0 chr3LHet 1992572 1992638 -562853 - DNAREP1_DM LINE Penelope -527 67 2 4 600 255 79 0 0 chr3LHet 1992636 1992674 -562817 - DNAREP1_DM LINE Penelope 0 594 557 4 600 263 323 0 0 chr3LHet 1993069 1993165 -562326 - LINEJ1_DM LINE Jockey -2350 2670 2575 4 600 29 47 0 0 chr3LHet 1993310 1993353 -562138 + AT_rich Low_complexity Low_complexity 1 43 0 4 600 6424 43 8 2 chr3LHet 1993696 1994542 -560949 + TC1-2_DM DNA Tc1 1 851 -793 4 600 377 183 10 61 chr3LHet 1994544 1994643 -560848 - DNAREP1_DM LINE Penelope -500 94 1 4 600 533 219 7 46 chr3LHet 1994688 1994841 -560650 + Gypsy2_LTR LTR Gypsy 1 147 -206 4 600 5133 289 62 17 chr3LHet 1994853 1997783 -557708 + Gypsy6_I LTR Gypsy 332 3442 -3570 4 600 4726 169 6 2 chr3LHet 1997787 1998628 -556863 + Gypsy2_I LTR Gypsy 2791 3634 -2501 4 600 2786 226 159 21 chr3LHet 1998633 1999533 -555958 + Gypsy2_I LTR Gypsy 4439 5462 -673 4 600 8294 38 1 2 chr3LHet 2001555 2002547 -552944 + TC1-2_DM DNA Tc1 1 991 -653 4 600 4146 22 40 4 chr3LHet 2002547 2003050 -552441 + TC1-2_DM DNA Tc1 1124 1644 0 4 600 2394 101 149 23 chr3LHet 2003821 2004455 -551036 + DNAREP1_DM LINE Penelope 10 594 0 4 600 50 18 0 0 chr3LHet 2004530 2004587 -550904 + AT_rich Low_complexity Low_complexity 1 57 0 4 600 322 91 0 0 chr3LHet 2004896 2004940 -550551 - DNAREP1_DM LINE Penelope -1 593 550 4 600 225 209 0 0 chr3LHet 2004936 2004979 -550512 - DNAREP1_DM LINE Penelope -202 392 350 4 600 1492 316 38 31 chr3LHet 2006527 2007180 -548311 + NINJA_I LTR Pao 954 1611 -4400 4 600 8901 310 43 15 chr3LHet 2007266 2011101 -544390 + NINJA_I LTR Pao 2066 6011 0 4 600 27 0 0 0 chr3LHet 2011507 2011534 -543957 + AT_rich Low_complexity Low_complexity 1 27 0 4 600 348 96 0 71 chr3LHet 2011534 2011590 -543901 - PROTOP_B DNA P -9 1144 1093 4 600 846 21 0 0 chr3LHet 2011776 2011871 -543620 - DNAREP1_DM LINE Penelope 0 594 500 4 600 2424 25 3 37 chr3LHet 2011872 2012169 -543322 + Gypsy4_LTR LTR Gypsy 1 287 0 4 600 21138 19 20 4 chr3LHet 2012169 2014626 -540865 + Gypsy4_I LTR Gypsy 1 2597 -3691 4 600 31128 15 9 0 chr3LHet 2014625 2018093 -537398 + Gypsy4_I LTR Gypsy 2791 6288 0 4 600 2351 18 10 44 chr3LHet 2018093 2018390 -537101 + Gypsy4_LTR LTR Gypsy 1 287 0 4 600 1090 104 115 6 chr3LHet 2018390 2018544 -536947 - DNAREP1_DM LINE Penelope -107 487 315 4 600 36 70 0 0 chr3LHet 2018900 2018971 -536520 + AT_rich Low_complexity Low_complexity 1 71 0 4 600 774 153 116 43 chr3LHet 2019221 2019456 -536035 - DNAREP1_DM LINE Penelope -267 327 88 4 600 43 20 0 0 chr3LHet 2021383 2021433 -534058 + AT_rich Low_complexity Low_complexity 1 50 0 4 600 25 83 0 0 chr3LHet 2023220 2023280 -532211 + AT_rich Low_complexity Low_complexity 1 60 0 4 600 32 103 0 0 chr3LHet 2023968 2024084 -531407 + AT_rich Low_complexity Low_complexity 1 116 0 4 600 339 156 112 20 chr3LHet 2024210 2024308 -531183 + Gypsy6_LTR LTR Gypsy 155 261 -146 4 600 28 0 0 0 chr3LHet 2024535 2024563 -530928 + AT_rich Low_complexity Low_complexity 1 28 0 4 600 371 83 132 53 chr3LHet 2024828 2024904 -530587 - DNAREP1_DM LINE Penelope -423 171 90 4 600 306 160 126 29 chr3LHet 2025512 2025615 -529876 - DNAREP1_DM LINE Penelope -273 321 209 4 600 644 81 0 0 chr3LHet 2026261 2026348 -529143 + STALKER4_LTR LTR Gypsy 1 87 -315 4 600 546 32 0 0 chr3LHet 2026365 2026427 -529064 + DMCR1A LINE CR1 4077 4138 -332 4 600 2450 60 26 38 chr3LHet 2027076 2027421 -528070 + DMCR1A LINE CR1 4130 4470 0 4 600 1982 75 38 31 chr3LHet 2027422 2027710 -527781 + STALKER4_LTR LTR Gypsy 84 373 -29 4 600 225 139 139 0 chr3LHet 2027747 2027783 -527708 + DM412 LTR Gypsy 291 331 -6566 4 600 2202 150 89 35 chr3LHet 2027884 2028492 -526999 + STALKER4_I LTR Gypsy 382 1086 -5444 4 600 1929 131 31 0 chr3LHet 2028505 2028825 -526666 + STALKER4_I LTR Gypsy 2990 3319 -3211 4 600 10847 47 71 7 chr3LHet 2028826 2030212 -525279 - Baggins1 LINE LOA -874 4579 3104 4 600 678 69 0 0 chr3LHet 2030228 2030315 -525176 + Invader2_LTR LTR Gypsy 1 87 -179 4 600 17251 11 6 1 chr3LHet 2030313 2032317 -523174 + Invader2_I LTR Gypsy 2579 4592 0 4 600 1790 30 144 17 chr3LHet 2032317 2032553 -522938 + Invader2_LTR LTR Gypsy 1 266 0 4 600 4979 48 51 0 chr3LHet 2032553 2033447 -522044 - Baggins1 LINE LOA -2450 3003 2064 4 600 9639 35 56 5 chr3LHet 2033445 2034646 -520845 - Baggins1 LINE LOA -4191 1262 1 4 600 1388 99 0 0 chr3LHet 2034638 2034829 -520662 + Stalker2_I LTR Gypsy 3867 4057 -3345 4 600 17040 84 32 5 chr3LHet 2034837 2037212 -518279 + STALKER4_I LTR Gypsy 3852 6289 -241 4 600 2859 140 107 30 chr3LHet 2037238 2037835 -517656 - QUASIMODO_LTR LTR Gypsy -15 643 1 4 600 263 211 0 17 chr3LHet 2037835 2037893 -517598 - QUASIMODO_I LTR Gypsy 0 6060 6004 4 600 368 249 27 27 chr3LHet 2037999 2038185 -517306 - QUASIMODO_I LTR Gypsy -561 5499 5314 4 600 2023 36 161 0 chr3LHet 2038186 2038460 -517031 + DOC3_DM LINE Jockey 972 1289 -3451 4 600 16832 47 60 8 chr3LHet 2038468 2042719 -512772 - DMCR1A LINE CR1 0 4470 1 4 600 1659 48 5 0 chr3LHet 2042731 2042937 -512554 + DOC3_DM LINE Jockey 1287 1493 -3247 4 600 12179 61 14 8 chr3LHet 2042935 2044493 -510998 + DOC3_DM LINE Jockey 1596 3161 -1579 4 600 1503 31 0 30 chr3LHet 2044390 2044587 -510904 - DMCR1A LINE CR1 -4279 191 1 4 600 42 48 0 0 chr3LHet 2044592 2044655 -510836 + AT_rich Low_complexity Low_complexity 1 63 0 4 600 259 160 60 0 chr3LHet 2044719 2044769 -510722 - DM297_LTR LTR Gypsy 0 414 362 4 600 549 73 0 0 chr3LHet 2044777 2044845 -510646 + DNAREP1_DM LINE Penelope 17 84 -510 4 600 343 26 0 0 chr3LHet 2045486 2045525 -509966 - DMCR1A LINE CR1 -864 3606 3568 4 600 29 84 0 0 chr3LHet 2045600 2045671 -509820 + AT_rich Low_complexity Low_complexity 1 71 0 4 600 264 342 8 8 chr3LHet 2046476 2046597 -508894 - Gypsy4_I LTR Gypsy -5322 966 846 4 600 30 27 0 0 chr3LHet 2046989 2047026 -508465 + AT_rich Low_complexity Low_complexity 1 37 0 4 600 1045 340 34 43 chr3LHet 2047318 2048364 -507127 + MICROPIA_I LTR Gypsy 59 1083 -3393 4 600 2473 48 6 25 chr3LHet 2048391 2048713 -506778 - NINJA_LTR LTR Pao -1 316 1 4 600 8094 28 62 2 chr3LHet 2048713 2049718 -505773 - NINJA_I LTR Pao 0 6011 4947 4 600 24362 25 0 21 chr3LHet 2049707 2052687 -502804 - NINJA_I LTR Pao -3092 2919 1 4 600 2476 51 6 25 chr3LHet 2052687 2053010 -502481 - NINJA_LTR LTR Pao 0 317 1 4 600 774 311 7 3 chr3LHet 2053256 2053553 -501938 + MICROPIA_I LTR Gypsy 1349 1646 -2830 4 600 4530 320 25 22 chr3LHet 2053548 2055666 -499825 + MICROPIA_I LTR Gypsy 1946 3894 -582 4 600 220 223 0 55 chr3LHet 2055889 2056017 -499474 + A-rich Low_complexity Low_complexity 5 125 0 4 600 2611 32 0 28 chr3LHet 2056851 2057174 -498317 - NINJA_LTR LTR Pao -3 314 1 4 600 5985 22 45 276 chr3LHet 2057174 2058559 -496932 - NINJA_I LTR Pao 0 6011 4947 4 600 11081 29 2 6 chr3LHet 2058548 2059859 -495632 - NINJA_I LTR Pao -3092 2919 1614 4 600 26543 33 17 6 chr3LHet 2059853 2063256 -492235 - NINJA_I LTR Pao -830 5181 1 4 600 2478 51 6 25 chr3LHet 2063256 2063579 -491912 - NINJA_LTR LTR Pao 0 317 1 4 600 767 311 7 3 chr3LHet 2063825 2064122 -491369 + MICROPIA_I LTR Gypsy 1349 1646 -2830 4 600 4437 314 29 26 chr3LHet 2064117 2066235 -489256 + MICROPIA_I LTR Gypsy 1946 3894 -582 4 600 220 223 0 55 chr3LHet 2066458 2066586 -488905 + A-rich Low_complexity Low_complexity 5 125 0 4 600 2583 35 3 25 chr3LHet 2067420 2067741 -487750 - NINJA_LTR LTR Pao -3 314 1 4 600 22 0 0 0 chr3LHet 2067858 2067880 -487611 + AT_rich Low_complexity Low_complexity 1 22 0 4 600 43812 3 0 0 chr3LHet 2067880 2072583 -482908 - BS2 LINE Jockey 0 4721 19 4 600 5670 312 38 31 chr3LHet 2072722 2075421 -480070 + MICROPIA_I LTR Gypsy 1349 3894 -582 4 600 226 239 14 28 chr3LHet 2075596 2075738 -479753 + GA-rich Low_complexity Low_complexity 1 140 0 4 600 2611 32 0 28 chr3LHet 2076559 2076882 -478609 - NINJA_LTR LTR Pao -3 314 1 4 600 4634 30 0 2 chr3LHet 2076882 2077426 -478065 - NINJA_I LTR Pao 0 6011 5469 4 600 9591 23 2 0 chr3LHet 2077426 2078529 -476962 + PROTOP_A DNA P 1 1105 0 4 600 29202 32 15 6 chr3LHet 2078529 2082229 -473262 - NINJA_I LTR Pao -536 5475 1 4 600 1664 62 5 5 chr3LHet 2082229 2082438 -473053 - NINJA_LTR LTR Pao 0 317 109 4 600 782 299 31 24 chr3LHet 2082543 2082958 -472533 + QUASIMODO_I LTR Gypsy 1204 1621 -4439 4 600 915 285 15 13 chr3LHet 2083025 2083371 -472120 + IDEFIX_I LTR Gypsy 1429 1737 -3891 4 600 3287 275 98 14 chr3LHet 2083379 2085070 -470421 + QUASIMODO_I LTR Gypsy 3609 5441 -619 4 600 24 0 0 0 chr3LHet 2085216 2085240 -470251 + AT_rich Low_complexity Low_complexity 1 24 0 4 600 601 180 0 0 chr3LHet 2085684 2085784 -469707 - NOMAD_I LTR Gypsy 0 6572 6473 4 600 332 160 0 0 chr3LHet 2085800 2085850 -469641 - NOMAD_I LTR Gypsy -491 6081 6032 4 600 5402 153 108 5 chr3LHet 2086546 2087621 -467870 - NOMAD_I LTR Gypsy -733 5839 4653 4 600 1144 167 86 4 chr3LHet 2087621 2087855 -467636 + Gypsy12A_LTR LTR Gypsy 1 253 -2027 4 600 770 201 119 13 chr3LHet 2087854 2088081 -467410 + Gypsy12A_LTR LTR Gypsy 518 768 -1512 4 600 3379 47 13 0 chr3LHet 2088082 2088607 -466884 - DMCR1A LINE CR1 0 4470 3909 4 600 11579 42 72 10 chr3LHet 2088607 2090206 -465285 - DMCR1A LINE CR1 -683 3787 2090 4 600 9497 22 2 8 chr3LHet 2090206 2091318 -464173 - PROTOP_A DNA P 0 1105 1 4 600 13546 34 34 5 chr3LHet 2091318 2092941 -462550 - DMCR1A LINE CR1 -2374 2096 427 4 600 32376 6 14 0 chr3LHet 2092938 2096488 -459003 - DMRT1A LINE R1 -2 5181 1582 4 9 11614 42 27 23 chr3LHet 2096485 2097959 -457532 + DIVER2_I LTR Pao 1312 2791 -1356 4 601 3270 22 0 0 chr3LHet 2097970 2098337 -457154 + DIVER2_I LTR Pao 3689 4055 -92 4 601 507 318 29 14 chr3LHet 2098371 2098649 -456842 - TV1I LTR Gypsy -5044 919 638 4 601 1966 169 16 75 chr3LHet 2098700 2099140 -456351 - Gypsy12A_LTR LTR Gypsy -835 1445 1032 4 601 347 133 65 26 chr3LHet 2099149 2099226 -456265 - Gypsy12A_LTR LTR Gypsy -1389 891 812 4 601 889 44 0 9 chr3LHet 2099236 2099350 -456141 - TC1_DM DNA Tc1 0 1666 1554 4 601 290 178 187 29 chr3LHet 2099357 2099496 -455995 - Gypsy12A_LTR LTR Gypsy -1482 798 638 4 601 2125 27 30 27 chr3LHet 2099497 2099760 -455731 + PROTOP DNA P 4 267 -4213 4 601 53 30 0 0 chr3LHet 2099877 2099944 -455547 + AT_rich Low_complexity Low_complexity 1 67 0 4 601 21 57 0 0 chr3LHet 2100097 2100132 -455359 + AT_rich Low_complexity Low_complexity 1 35 0 4 601 2578 327 72 53 chr3LHet 2100281 2102454 -453037 + HMSBEAGLE_I LTR Gypsy 1485 3699 -2830 4 601 3019 54 58 5 chr3LHet 2102594 2103017 -452474 + PROTOP DNA P 235 682 -3798 4 601 2832 64 8 3 chr3LHet 2103017 2103379 -452112 + Gypsy10_LTR LTR Gypsy 1 364 0 4 601 265 222 0 0 chr3LHet 2104368 2104422 -451069 + HMSBEAGLE_I LTR Gypsy 6476 6529 0 4 601 19431 7 16 9 chr3LHet 2104651 2106853 -448638 + Invader4_I LTR Gypsy 197 2413 0 4 601 3235 3 0 0 chr3LHet 2106853 2107199 -448292 + Invader4_LTR LTR Gypsy 1 346 0 4 601 442 66 0 0 chr3LHet 2107199 2107260 -448231 + STALKER4_LTR LTR Gypsy 259 319 -83 4 601 22 35 0 0 chr3LHet 2107273 2107302 -448189 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 3788 5 2 0 chr3LHet 2107312 2107724 -447767 + Invader1_LTR LTR Gypsy 11 423 0 4 601 6453 75 6 7 chr3LHet 2107724 2109185 -446306 + Invader1_I LTR Gypsy 1 1571 -2528 4 601 3509 194 16 10 chr3LHet 2109176 2110210 -445281 + Invader1_I LTR Gypsy 1301 3051 -1048 4 601 12495 7 1 1 chr3LHet 2110212 2111581 -443910 + Invader1_I LTR Gypsy 1819 3186 0 4 601 2487 3 102 0 chr3LHet 2111581 2111926 -443565 + Invader1_LTR LTR Gypsy 1 380 -43 4 601 9355 65 9 2 chr3LHet 2111923 2113132 -442359 - IVK_DM LINE I -261 5141 3925 4 601 21 0 0 0 chr3LHet 2113132 2113153 -442338 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 14007 59 77 25 chr3LHet 2113153 2116541 -438950 - IVK_DM LINE I -1836 3566 3 4 601 22 35 0 0 chr3LHet 2116596 2116625 -438866 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 332 209 11 44 chr3LHet 2117051 2117141 -438350 - Gypsy8_LTR LTR Gypsy -119 185 99 4 601 854 177 178 19 chr3LHet 2117244 2117457 -438034 + Invader4_LTR LTR Gypsy 100 346 0 4 601 1666 86 76 22 chr3LHet 2117457 2117732 -437759 + Invader4_I LTR Gypsy 1 328 -2085 4 601 1177 44 13 6 chr3LHet 2117738 2117897 -437594 - FW2_DM LINE Jockey 0 3961 3802 4 601 1412 60 0 11 chr3LHet 2117897 2118083 -437408 - FW2_DM LINE Jockey -59 3902 3719 4 601 3965 69 111 5 chr3LHet 2118116 2118756 -436735 + M4DM DNA Transib 1 708 -727 4 601 2135 49 21 14 chr3LHet 2118754 2119044 -436447 + M4DM DNA Transib 833 1124 -311 4 601 3616 0 0 2 chr3LHet 2119070 2119473 -436018 - STALKER4_LTR LTR Gypsy 0 402 1 4 601 56313 11 1 2 chr3LHet 2119473 2126010 -429481 - STALKER4_I LTR Gypsy 0 6530 1 4 601 3616 0 0 2 chr3LHet 2126010 2126413 -429078 - STALKER4_LTR LTR Gypsy 0 402 1 4 601 2259 55 26 3 chr3LHet 2126413 2126722 -428769 + M4DM DNA Transib 1120 1435 0 4 601 9953 49 93 3 chr3LHet 2126722 2128062 -427429 - FW2_DM LINE Jockey -310 3651 2191 4 601 3948 63 23 8 chr3LHet 2128059 2128587 -426904 - FW2_DM LINE Jockey -3087 874 339 4 601 2099 320 44 27 chr3LHet 2128577 2129878 -425613 + MICROPIA_I LTR Gypsy 1428 3513 -963 4 601 1550 178 198 84 chr3LHet 2130341 2131078 -424413 + Invader4_I LTR Gypsy 1664 2560 -626 4 601 860 101 174 0 chr3LHet 2131078 2131216 -424275 + Invader4_LTR LTR Gypsy 1 162 -184 4 601 1133 88 5 0 chr3LHet 2131213 2131405 -424086 - S_DM DNA Tc1 -65 1671 1479 4 601 3612 44 122 0 chr3LHet 2131404 2132107 -423384 + DMCR1A LINE CR1 958 1746 -2724 4 601 6660 31 6 20 chr3LHet 2132122 2132952 -422539 + DMCR1A LINE CR1 3653 4470 0 4 601 521 239 13 25 chr3LHet 2132988 2133147 -422344 - QUASIMODO_LTR LTR Gypsy -69 589 433 4 601 4047 169 136 10 chr3LHet 2133149 2134026 -421465 - DMCR1A LINE CR1 -2290 2180 1194 4 601 924 235 155 3 chr3LHet 2134630 2134971 -420520 + Gypsy3_I LTR Gypsy 913 1305 -4872 4 601 708 61 10 0 chr3LHet 2135006 2135105 -420386 + PROTOP_A DNA P 196 295 -810 4 601 463 34 17 0 chr3LHet 2135146 2135205 -420286 + PROTOP_A DNA P 945 1005 -100 4 601 2335 258 57 5 chr3LHet 2135199 2135819 -419672 + Gypsy6_I LTR Gypsy 2210 2861 -4151 4 601 799 171 195 30 chr3LHet 2135828 2136040 -419451 + Gypsy3_I LTR Gypsy 2758 2993 -3184 4 601 245 57 0 79 chr3LHet 2136031 2136069 -419422 + Gypsy3_I LTR Gypsy 3322 3356 -2821 4 601 3239 184 117 50 chr3LHet 2136049 2136843 -418648 + Gypsy3_I LTR Gypsy 3473 4319 -1858 4 601 3680 26 2 0 chr3LHet 2136843 2137270 -418221 + ROO_LTR LTR Pao 1 428 0 4 601 66738 17 31 4 chr3LHet 2137270 2138336 -417155 + ROO_I LTR Pao 1 1162 -7094 4 601 198 0 0 0 chr3LHet 2138336 2138358 -417133 + (C)n Simple_repeat Simple_repeat 1 22 0 4 601 66738 17 31 4 chr3LHet 2138358 2145326 -410165 + ROO_I LTR Pao 1163 8255 -1 4 601 3743 19 2 0 chr3LHet 2145326 2145753 -409738 + ROO_LTR LTR Pao 1 428 0 4 601 1108 210 45 48 chr3LHet 2145763 2146053 -409438 + Gypsy3_I LTR Gypsy 4387 4675 -1502 4 601 16383 40 72 7 chr3LHet 2148180 2150814 -404677 - ROOA_I LTR Pao -2548 4301 1495 4 601 4569 44 2 2 chr3LHet 2150810 2151380 -404111 - ROOA_I LTR Pao -6183 666 11 4 601 2954 46 3 0 chr3LHet 2151385 2151753 -403738 - ROOA_LTR LTR Pao 0 386 18 4 601 400 202 32 48 chr3LHet 2151759 2151884 -403607 + M4DM DNA Transib 1 123 -1312 4 601 24 32 0 0 chr3LHet 2151905 2151936 -403555 + AT_rich Low_complexity Low_complexity 1 31 0 4 601 331 216 0 0 chr3LHet 2152009 2152083 -403408 + M4DM DNA Transib 331 404 -1031 4 601 249 266 61 61 chr3LHet 2152017 2152181 -403310 - TRANSIB2 DNA Transib -418 2426 2263 4 601 1423 138 71 66 chr3LHet 2152535 2152966 -402525 + DNAREP1_DM LINE Penelope 27 561 -33 4 601 236 185 29 58 chr3LHet 2153267 2153336 -402155 - TRANSIB4 DNA Transib -1050 1560 1494 4 601 363 264 9 0 chr3LHet 2154077 2154187 -401304 + M4DM DNA Transib 791 901 -534 4 601 5052 134 122 2 chr3LHet 2154262 2155251 -400240 - DOC LINE Jockey -709 4031 2873 4 601 1373 70 70 0 chr3LHet 2155255 2155440 -400051 - DOC LINE Jockey -2279 2446 2249 4 601 2573 210 109 117 chr3LHet 2155441 2156660 -398831 - DOC LINE Jockey -2702 2023 815 4 601 226 317 57 19 chr3LHet 2156736 2156842 -398649 - DIVER2_I LTR Pao -2577 1570 1461 4 601 850 141 13 0 chr3LHet 2156867 2157023 -398468 + DNAREP1_DM LINE Penelope 125 282 -312 4 601 1788 107 27 3 chr3LHet 2158155 2158447 -397044 + DNAREP1_DM LINE Penelope 1 299 -295 4 601 671 317 98 18 chr3LHet 2158482 2158929 -396562 + Copia2_I LTR Copia 1293 1775 -2387 4 601 391 329 6 13 chr3LHet 2158946 2159103 -396388 + DM1731_I LTR Copia 1733 1888 -2088 4 601 1578 329 8 7 chr3LHet 2159412 2160137 -395354 + Copia2_I LTR Copia 2449 3174 -988 4 601 248 0 31 0 chr3LHet 2160296 2160328 -395163 + (TAA)n Simple_repeat Simple_repeat 3 35 0 4 601 4130 193 27 31 chr3LHet 2160328 2162429 -393062 + SAR_DM Satellite Satellite 1 2093 -203 4 601 4263 202 49 59 chr3LHet 2162445 2166172 -389319 + SAR_DM Satellite Satellite 1 3690 -203 4 601 3873 199 67 31 chr3LHet 2166183 2167374 -388117 + SAR_DM Satellite Satellite 1 1233 -261 4 601 3897 209 43 52 chr3LHet 2167390 2170071 -385420 + SAR_DM Satellite Satellite 1 2657 -577 4 601 2421 169 25 15 chr3LHet 2170082 2170611 -384880 + SAR_DM Satellite Satellite 543 1076 -396 4 601 4030 175 12 18 chr3LHet 2170627 2171518 -383973 + SAR_DM Satellite Satellite 191 1076 -396 4 601 818 189 0 3 chr3LHet 2171529 2171819 -383672 + SAR_DM Satellite Satellite 1 289 -841 4 601 3965 174 14 19 chr3LHet 2171830 2172721 -382770 + SAR_DM Satellite Satellite 191 1076 -396 4 601 2262 195 21 9 chr3LHet 2172732 2173260 -382231 + SAR_DM Satellite Satellite 543 1076 -396 4 601 2390 178 17 11 chr3LHet 2173271 2174095 -381396 + SAR_DM Satellite Satellite 1 829 -841 4 601 2362 173 25 15 chr3LHet 2174106 2174635 -380856 + SAR_DM Satellite Satellite 543 1076 -396 4 601 3993 178 10 16 chr3LHet 2174651 2175542 -379949 + SAR_DM Satellite Satellite 191 1076 -396 4 601 2322 184 23 13 chr3LHet 2175553 2176082 -379409 + SAR_DM Satellite Satellite 543 1076 -396 4 601 818 189 0 3 chr3LHet 2176093 2176383 -379108 + SAR_DM Satellite Satellite 1 289 -841 4 601 3947 187 23 54 chr3LHet 2176394 2178364 -377127 + SAR_DM Satellite Satellite 1 1909 -203 4 601 2322 184 23 13 chr3LHet 2178375 2178904 -376587 + SAR_DM Satellite Satellite 543 1076 -396 4 601 3402 185 42 23 chr3LHet 2178915 2180063 -375428 + SAR_DM Satellite Satellite 1 1169 -841 4 601 957 171 0 0 chr3LHet 2180074 2180255 -375236 + SAR_DM Satellite Satellite 543 723 -749 4 601 2391 214 101 44 chr3LHet 2180369 2181887 -373604 + SAR_DM Satellite Satellite 1 1604 -396 4 601 1347 162 37 0 chr3LHet 2181899 2182171 -373320 + SAR_DM Satellite Satellite 533 814 -658 4 601 452 82 0 0 chr3LHet 2182207 2182268 -373223 + FB4_DM DNA Tc1 2 62 -4027 4 601 2010 122 85 133 chr3LHet 2182247 2182835 -372656 - FB4_DM DNA Tc1 -3357 732 173 4 601 4378 185 25 26 chr3LHet 2182844 2184438 -371053 + SAR_DM Satellite Satellite 1 1591 -678 4 601 2586 217 98 43 chr3LHet 2184454 2186026 -369465 + SAR_DM Satellite Satellite 1 1658 -396 4 601 1347 162 37 0 chr3LHet 2186038 2186310 -369181 + SAR_DM Satellite Satellite 533 814 -658 4 601 450 82 0 0 chr3LHet 2186346 2186407 -369084 + FB4_DM DNA Tc1 2 62 -4027 4 601 2010 122 85 133 chr3LHet 2186386 2186974 -368517 - FB4_DM DNA Tc1 -3357 732 173 4 601 2551 189 16 13 chr3LHet 2186983 2187601 -367890 + SAR_DM Satellite Satellite 457 1076 -396 4 601 2654 208 66 41 chr3LHet 2187617 2188918 -366573 + SAR_DM Satellite Satellite 1 1334 -396 4 601 483 167 52 0 chr3LHet 2188832 2188928 -366563 - XDMR Unknown Unknown 0 361 261 4 601 420 98 0 0 chr3LHet 2188962 2189023 -366468 + FB4_DM DNA Tc1 2 62 -4027 4 601 3204 106 120 61 chr3LHet 2189002 2189401 -366090 - FB4_DM DNA Tc1 -3357 732 322 4 601 199 0 31 31 chr3LHet 2189401 2189433 -366058 + (TAA)n Simple_repeat Simple_repeat 2 33 0 4 601 3204 106 120 61 chr3LHet 2189433 2189724 -365767 - FB4_DM DNA Tc1 -3768 321 1 4 601 1808 125 44 5 chr3LHet 2189726 2190054 -365437 + DNAREP1_DM LINE Penelope 123 445 -149 4 601 37 62 0 0 chr3LHet 2191686 2191751 -363740 + AT_rich Low_complexity Low_complexity 1 65 0 4 601 748 123 407 0 chr3LHet 2191966 2192203 -363288 - DNAREP1_DM LINE Penelope -2 592 258 4 601 502 27 187 0 chr3LHet 2192203 2192278 -363213 - DNAREP1_DM LINE Penelope 0 594 506 4 601 800 90 7 7 chr3LHet 2192282 2192428 -363063 + S_DM DNA Tc1 107 252 -1484 4 601 6123 108 39 6 chr3LHet 2192427 2193410 -362081 + S_DM DNA Tc1 720 1734 -2 4 601 1042 197 16 24 chr3LHet 2193424 2193679 -361812 - DNAREP1_DM LINE Penelope -252 342 90 4 601 227 246 46 0 chr3LHet 2193713 2193778 -361713 - G_DM LINE Jockey -412 3934 3867 4 601 1991 56 0 4 chr3LHet 2193924 2194174 -361317 - PROTOP DNA P -6 4474 4220 4 601 3030 66 266 1 chr3LHet 2194184 2194730 -360761 - PROTOP DNA P -371 4109 3444 4 601 768 86 80 1 chr3LHet 2194727 2194933 -360558 - PROTOP_B DNA P -3551 929 685 4 601 428 320 50 41 chr3LHet 2194988 2195307 -360184 - G2_DM LINE Jockey -1044 2058 1737 4 601 327 271 74 9 chr3LHet 2195758 2195866 -359625 - DMRT1C LINE R1 -1254 4189 4075 4 601 276 269 13 13 chr3LHet 2196319 2196398 -359093 - BS2 LINE Jockey -808 3913 3835 4 601 245 213 0 0 chr3LHet 2196536 2196598 -358893 - G_DM LINE Jockey -1021 3325 3282 4 601 488 322 11 5 chr3LHet 2196617 2196801 -358690 - BS2 LINE Jockey -1201 3520 3336 4 601 2117 57 0 0 chr3LHet 2197025 2197290 -358201 + DMCR1A LINE CR1 299 563 -3907 4 601 2856 3 0 0 chr3LHet 2197308 2197620 -357871 - BS2 LINE Jockey 0 4721 4410 4 601 5413 34 1 9 chr3LHet 2197642 2198319 -357172 - DMCR1A LINE CR1 -3766 704 33 4 601 33 0 0 0 chr3LHet 2198766 2198799 -356692 + AT_rich Low_complexity Low_complexity 1 33 0 4 601 1593 80 76 0 chr3LHet 2199145 2199382 -356109 + DMCR1A LINE CR1 4191 4445 -25 4 601 3057 75 76 46 chr3LHet 2199378 2199879 -355612 - Gypsy8_I LTR Gypsy -2554 1793 1278 4 601 5137 210 48 41 chr3LHet 2199876 2201539 -353952 - Gypsy8_I LTR Gypsy -4073 2580 228 4 601 1111 91 0 44 chr3LHet 2201652 2201835 -353656 - Gypsy8_I LTR Gypsy -4111 236 62 4 601 522 32 0 0 chr3LHet 2201881 2201944 -353547 - Gypsy8_LTR LTR Gypsy -240 64 2 4 601 466 340 12 12 chr3LHet 2201965 2202218 -353273 - DM1731_I LTR Copia -939 3037 2785 4 601 2421 8 0 0 chr3LHet 2202218 2202484 -353007 + DMLTR5 LTR Gypsy 1 266 0 4 601 6808 2 0 4 chr3LHet 2202483 2203282 -352209 + HMSBEAGLE_I LTR Gypsy 1 796 -5733 4 601 974 29 52 12 chr3LHet 2203282 2203454 -352037 + (TTA)n Simple_repeat Simple_repeat 1 179 0 4 601 50595 0 1 0 chr3LHet 2203454 2209012 -346479 + HMSBEAGLE_I LTR Gypsy 969 6529 0 4 601 2421 8 0 0 chr3LHet 2209012 2209278 -346213 + DMLTR5 LTR Gypsy 1 266 0 4 601 674 332 14 14 chr3LHet 2209278 2209571 -345920 - DM1731_I LTR Copia -1188 2788 2496 4 601 2390 317 33 45 chr3LHet 2209585 2211055 -344436 - DM1731_I LTR Copia -1623 2353 902 4 601 412 338 36 32 chr3LHet 2211368 2211677 -343814 - DM1731_I LTR Copia -3562 414 105 4 601 24 0 0 0 chr3LHet 2212288 2212312 -343179 + AT_rich Low_complexity Low_complexity 1 24 0 4 601 202 189 0 0 chr3LHet 2212471 2212508 -342983 + (CTTCG)n Simple_repeat Simple_repeat 2 38 0 4 601 311 71 0 0 chr3LHet 2213201 2213243 -342248 + DMCR1A LINE CR1 3989 4030 -440 4 601 490 118 0 0 chr3LHet 2213242 2213318 -342173 - DMCR1A LINE CR1 -663 3807 3732 4 601 1589 112 0 0 chr3LHet 2213316 2213539 -341952 - DMCR1A LINE CR1 -886 3584 3362 4 601 280 27 27 0 chr3LHet 2213534 2213571 -341920 - DMCR1A LINE CR1 -1390 3080 3043 4 601 6961 50 36 8 chr3LHet 2213572 2214463 -341028 - Baggins1 LINE LOA -86 5367 4452 4 601 1363 25 0 0 chr3LHet 2214449 2214606 -340885 + DOC2_DM LINE Jockey 4 160 -4633 4 601 38305 13 10 7 chr3LHet 2214605 2219065 -336426 + DOC2_DM LINE Jockey 322 4793 0 4 601 554 82 0 0 chr3LHet 2219082 2219155 -336336 - Baggins1 LINE LOA -1003 4450 4378 4 601 9671 49 42 0 chr3LHet 2219163 2220388 -335103 - Baggins1 LINE LOA -1418 4035 2759 4 601 3174 63 58 2 chr3LHet 2220386 2220815 -334676 - Baggins1 LINE LOA -2527 2926 2474 4 601 1110 86 132 16 chr3LHet 2220804 2220994 -334497 + G5A_DM LINE Jockey 2606 2817 -24 4 601 26 0 0 0 chr3LHet 2222907 2222933 -332558 + AT_rich Low_complexity Low_complexity 1 26 0 4 601 6325 57 91 0 chr3LHet 2223078 2223907 -331584 - Baggins1 LINE LOA -2320 3133 2230 4 601 1949 119 3 19 chr3LHet 2224100 2224408 -331083 - DMCR1A LINE CR1 -1791 2679 2377 4 601 3134 70 1 21 chr3LHet 2224408 2224850 -330641 + STALKER4_LTR LTR Gypsy 1 399 -3 4 601 28 48 0 0 chr3LHet 2224938 2224980 -330511 + AT_rich Low_complexity Low_complexity 1 42 0 4 75 23531 41 24 11 chr3LHet 2224987 2228227 -327264 + STALKER4_I LTR Gypsy 291 3620 -2910 4 75 15587 8 14 1 chr3LHet 2228210 2230060 -325431 + STALKER4_I LTR Gypsy 4658 6530 0 4 602 2278 15 0 0 chr3LHet 2230060 2230316 -325175 + STALKER4_LTR LTR Gypsy 1 256 -146 4 602 1875 78 25 67 chr3LHet 2230316 2230631 -324860 + Gypsy6A_LTR LTR Gypsy 1 302 -118 4 602 931 98 17 9 chr3LHet 2230683 2230829 -324662 + STALKER4_LTR LTR Gypsy 227 379 -23 4 602 2014 146 270 0 chr3LHet 2230876 2231320 -324171 - DMCR1A LINE CR1 -2102 2368 1805 4 602 623 53 0 0 chr3LHet 2231366 2231442 -324049 - DNAREP1_DM LINE Penelope 0 594 519 4 602 775 111 189 27 chr3LHet 2231774 2231922 -323569 - DNAREP1_DM LINE Penelope -106 488 317 4 602 360 276 7 7 chr3LHet 2231955 2232102 -323389 - Gypsy12_I LTR Gypsy -2728 2818 2718 4 602 2104 220 165 7 chr3LHet 2232128 2232690 -322801 - Gypsy12_I LTR Gypsy -3460 2086 1436 4 602 888 214 107 61 chr3LHet 2232699 2233132 -322359 - Gypsy12_I LTR Gypsy -4812 734 214 4 602 17206 17 19 2 chr3LHet 2233148 2235193 -320298 + TRANSIB1 DNA Transib 936 3014 0 4 602 9660 21 22 7 chr3LHet 2235193 2236363 -319128 - PROTOP DNA P -760 3720 2533 4 602 1636 14 9 44 chr3LHet 2236357 2236582 -318909 - PROTOP DNA P -3370 1110 894 4 602 333 0 0 0 chr3LHet 2236607 2236644 -318847 + (CATA)n Simple_repeat Simple_repeat 3 39 0 4 602 5786 25 35 3 chr3LHet 2236644 2237369 -318122 - PROTOP DNA P -3732 748 1 4 602 290 209 143 0 chr3LHet 2237833 2237924 -317567 - Gypsy8_I LTR Gypsy -4243 104 1 4 602 1129 127 148 8 chr3LHet 2237994 2238234 -317257 + MDG1_I LTR Gypsy 743 1118 -5478 4 602 393 125 97 9 chr3LHet 2238262 2238375 -317116 + MDG1_I LTR Gypsy 1120 1242 -5354 4 602 9383 16 10 0 chr3LHet 2238512 2239606 -315885 - PROTOP_A DNA P 0 1105 1 4 602 539 288 76 38 chr3LHet 2240188 2240528 -314963 - LINEJ1_DM LINE Jockey -1107 3913 3675 4 602 1339 228 58 0 chr3LHet 2240736 2241113 -314378 + GTWIN_I LTR Gypsy 678 1123 -5298 4 602 504 251 1 0 chr3LHet 2241152 2241285 -314206 + GTWIN_I LTR Gypsy 3921 4034 -2387 4 602 1230 162 119 0 chr3LHet 2241283 2241518 -313973 + GTWIN_I LTR Gypsy 4271 4533 -1888 4 602 249 303 0 10 chr3LHet 2241521 2241621 -313870 + Gypsy_I LTR Gypsy 5431 5529 -978 4 602 1362 105 160 0 chr3LHet 2241623 2241861 -313630 + DNAREP1_DM LINE Penelope 202 477 -117 4 602 25 0 0 0 chr3LHet 2242051 2242076 -313415 + AT_rich Low_complexity Low_complexity 1 25 0 4 602 243 79 0 0 chr3LHet 2244378 2244416 -311075 - DNAREP1_DM LINE Penelope -287 307 270 4 602 228 143 163 0 chr3LHet 2244410 2244459 -311032 - DNAREP1_DM LINE Penelope -501 93 37 4 602 11436 97 545 15 chr3LHet 2244673 2247347 -308144 - FB4_DM DNA Tc1 0 4089 1 4 602 776 213 148 0 chr3LHet 2248799 2249015 -306476 + DMCR1A LINE CR1 508 755 -3715 4 602 692 163 104 0 chr3LHet 2249045 2249180 -306311 - DNAREP1_DM LINE Penelope 0 594 446 4 602 4485 60 67 18 chr3LHet 2249217 2249893 -305598 - PROTOP DNA P -849 3631 2923 4 602 3625 40 147 0 chr3LHet 2249894 2250403 -305088 - PROTOP DNA P -3894 586 1 4 602 265 256 11 11 chr3LHet 2250407 2250494 -304997 + Gypsy7_I LTR Gypsy 1904 1990 -2994 4 602 405 276 0 0 chr3LHet 2250496 2250583 -304908 + BURDOCK_I LTR Gypsy 2248 2334 -3526 4 602 475 324 51 17 chr3LHet 2252040 2252335 -303156 + DOC LINE Jockey 658 962 -3763 4 602 274 248 168 25 chr3LHet 2252345 2252506 -302985 + DOC2_DM LINE Jockey 1086 1269 -3524 4 602 509 254 107 19 chr3LHet 2252536 2252741 -302750 + DOC LINE Jockey 1311 1533 -3192 4 602 4315 40 79 8 chr3LHet 2252749 2253344 -302147 - PROTOP_B DNA P -46 1107 471 4 602 490 132 56 9 chr3LHet 2253338 2253445 -302046 - DNAREP1_DM LINE Penelope -293 301 190 4 602 339 161 0 0 chr3LHet 2253634 2253690 -301801 + DNAREP1_DM LINE Penelope 539 594 0 4 602 22 0 0 0 chr3LHet 2254503 2254525 -300966 + AT_rich Low_complexity Low_complexity 1 22 0 4 602 995 126 130 156 chr3LHet 2255301 2255785 -299706 - DNAREP1_DM LINE Penelope 0 594 1 4 602 1939 120 97 19 chr3LHet 2255928 2256335 -299156 - PROTOP_A DNA P 0 1105 680 4 602 7589 128 108 6 chr3LHet 2256381 2257842 -297649 + FB4_DM DNA Tc1 1145 2755 -1334 4 602 236 98 0 68 chr3LHet 2257838 2257882 -297609 - PROTOP DNA P -3426 1054 1014 4 602 492 117 146 0 chr3LHet 2257886 2258023 -297468 - PROTOP DNA P -3782 698 541 4 602 1112 36 14 0 chr3LHet 2258015 2258154 -297337 - PROTOP_B DNA P -650 503 363 4 602 627 147 17 0 chr3LHet 2258154 2258331 -297160 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 602 2493 52 48 23 chr3LHet 2258347 2258698 -296793 - PROTOP_B DNA P -793 360 1 4 602 1063 222 94 20 chr3LHet 2258702 2259001 -296490 + Gypsy7_I LTR Gypsy 1904 2224 -2760 4 602 509 271 213 20 chr3LHet 2260146 2260847 -294644 + DOC LINE Jockey 658 1533 -3192 4 602 4237 88 24 29 chr3LHet 2260855 2261733 -293758 - PROTOP_B DNA P -46 1107 183 4 602 46 0 0 0 chr3LHet 2261749 2261795 -293696 + AT_rich Low_complexity Low_complexity 1 46 0 4 602 6225 26 9 0 chr3LHet 2262287 2263050 -292441 - PROTOP_A DNA P -27 1078 309 4 602 1503 49 109 28 chr3LHet 2263047 2263258 -292233 - PROTOP_A DNA P -877 228 1 4 602 25 31 0 0 chr3LHet 2263340 2263372 -292119 + AT_rich Low_complexity Low_complexity 1 32 0 4 602 296 53 0 0 chr3LHet 2263640 2263678 -291813 - DNAREP1_DM LINE Penelope -235 359 322 4 602 612 123 28 0 chr3LHet 2263668 2263774 -291717 - DNAREP1_DM LINE Penelope -429 165 57 4 602 329 244 0 0 chr3LHet 2263780 2263870 -291621 + DMCR1A LINE CR1 2124 2213 -2257 4 602 2467 112 172 65 chr3LHet 2263874 2264410 -291081 - DNAREP1_DM LINE Penelope 0 594 2 4 602 1307 154 248 3 chr3LHet 2264408 2264707 -290784 - DNAREP1_DM LINE Penelope 0 594 223 4 602 543 153 294 5 chr3LHet 2264712 2264896 -290595 - DNAREP1_DM LINE Penelope -291 303 67 4 602 21 36 0 0 chr3LHet 2265426 2265454 -290037 + AT_rich Low_complexity Low_complexity 1 28 0 4 602 3008 255 57 12 chr3LHet 2265940 2266850 -288641 + G5_DM LINE Jockey 407 1357 -3499 4 602 3141 41 15 20 chr3LHet 2266850 2267249 -288242 + G5A_DM LINE Jockey 2445 2841 0 4 602 354 185 37 0 chr3LHet 2267476 2267557 -287934 - LINEJ1_DM LINE Jockey -39 4981 4898 4 602 522 146 107 0 chr3LHet 2267583 2267686 -287805 - LINEJ1_DM LINE Jockey -240 4780 4667 4 602 912 136 0 0 chr3LHet 2267695 2267835 -287656 - LINEJ1_DM LINE Jockey -495 4525 4386 4 602 3385 218 48 45 chr3LHet 2267875 2269124 -286367 - Gypsy2_I LTR Gypsy -3917 2260 1002 4 602 1116 190 139 23 chr3LHet 2269213 2269514 -285977 - Gypsy2_LTR LTR Gypsy -17 336 1 4 602 2196 202 153 8 chr3LHet 2269722 2270311 -285180 + Gypsy12_I LTR Gypsy 1696 2369 -3177 4 602 354 233 0 0 chr3LHet 2270312 2270385 -285106 + Gypsy12_I LTR Gypsy 2663 2735 -2811 4 602 3758 174 155 1 chr3LHet 2270385 2271126 -284365 + Gypsy12_I LTR Gypsy 2680 3534 -2012 4 602 235 158 0 0 chr3LHet 2271144 2271182 -284309 + Gypsy12_I LTR Gypsy 3901 3938 -1608 4 602 1731 196 16 56 chr3LHet 2271183 2271627 -283864 + Gypsy12_I LTR Gypsy 142 567 -4979 4 602 3117 175 132 27 chr3LHet 2271650 2272496 -282995 + Gypsy12_I LTR Gypsy 665 1599 -3947 4 602 677 211 0 7 chr3LHet 2272493 2272646 -282845 + Gypsy12_I LTR Gypsy 3533 3684 -1862 4 602 513 217 401 6 chr3LHet 2272682 2272869 -282622 + Gypsy12_I LTR Gypsy 4045 4305 -1241 4 602 1989 165 6 0 chr3LHet 2272849 2273183 -282308 + Gypsy12_I LTR Gypsy 4428 4763 -783 4 602 1783 169 228 7 chr3LHet 2273173 2273624 -281867 + Gypsy12_I LTR Gypsy 4996 5546 0 4 602 884 124 199 57 chr3LHet 2273626 2273937 -281554 + Gypsy12A_LTR LTR Gypsy 3 357 -1923 4 602 2072 151 88 81 chr3LHet 2273934 2274539 -280952 + Gypsy12A_LTR LTR Gypsy 484 1092 -1188 4 602 22 35 0 0 chr3LHet 2277964 2277993 -277498 + AT_rich Low_complexity Low_complexity 1 29 0 4 602 413 234 106 22 chr3LHet 2277994 2278173 -277318 + DNAREP1_DM LINE Penelope 6 199 -395 4 602 23 54 0 0 chr3LHet 2278173 2278210 -277281 + AT_rich Low_complexity Low_complexity 1 37 0 4 602 26 30 0 0 chr3LHet 2278280 2278313 -277178 + AT_rich Low_complexity Low_complexity 1 33 0 4 602 27 49 0 0 chr3LHet 2278349 2278390 -277101 + AT_rich Low_complexity Low_complexity 1 41 0 4 602 1760 180 60 61 chr3LHet 2278476 2279035 -276456 - DNAREP1_DM LINE Penelope -40 554 86 4 602 821 128 40 0 chr3LHet 2279086 2279235 -276256 - DNAREP1_DM LINE Penelope -439 155 1 4 602 589 68 104 0 chr3LHet 2280369 2280620 -274871 + (GTCTG)n Simple_repeat Simple_repeat 1 277 0 4 602 23 78 0 0 chr3LHet 2281252 2281303 -274188 + AT_rich Low_complexity Low_complexity 1 51 0 4 602 38 0 0 0 chr3LHet 2281951 2281989 -273502 + AT_rich Low_complexity Low_complexity 1 38 0 4 602 1217 92 11 0 chr3LHet 2283098 2283272 -272219 - Invader2_LTR LTR Gypsy 0 266 91 4 602 21 0 0 0 chr3LHet 2283403 2283424 -272067 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 298 270 0 0 chr3LHet 2283780 2283854 -271637 - Gypsy7_I LTR Gypsy -1691 3293 3220 4 602 468 139 331 0 chr3LHet 2283962 2284104 -271387 - TLD2 Unknown Unknown -25 193 5 4 602 523 316 48 27 chr3LHet 2284024 2284497 -270994 - Gypsy4_I LTR Gypsy -4181 3341 2471 4 602 29 70 0 0 chr3LHet 2284597 2284654 -270837 + AT_rich Low_complexity Low_complexity 1 57 0 4 602 24 32 0 0 chr3LHet 2284825 2284856 -270635 + AT_rich Low_complexity Low_complexity 1 31 0 4 602 9158 43 38 1 chr3LHet 2285673 2286824 -268667 + DMCR1A LINE CR1 3174 4367 -103 4 602 3130 116 67 14 chr3LHet 2286845 2287389 -268102 + DOC4_DM LINE Jockey 2085 2545 -246 4 602 38 22 0 0 chr3LHet 2289375 2289420 -266071 + AT_rich Low_complexity Low_complexity 1 45 0 4 602 18829 20 6 0 chr3LHet 2289511 2291691 -263800 + FW_DM LINE Jockey 2 2195 -2497 4 602 16560 19 26 4 chr3LHet 2291690 2293664 -261827 + FW_DM LINE Jockey 2671 4688 -4 4 602 566 201 0 65 chr3LHet 2294166 2294336 -261155 - Gypsy8_I LTR Gypsy -4123 224 66 4 602 270 152 13 132 chr3LHet 2294443 2294519 -260972 - Gypsy8_LTR LTR Gypsy -237 67 1 4 602 397 235 36 73 chr3LHet 2294863 2295028 -260463 + MDG3_I LTR Gypsy 3179 3337 -1649 4 602 6387 76 114 24 chr3LHet 2295231 2296288 -259203 + PROTOP_B DNA P 1 1153 0 4 602 1461 198 70 86 chr3LHet 2296482 2296957 -258534 + DNAREP1_DM LINE Penelope 123 589 -5 4 602 1435 141 28 8 chr3LHet 2297156 2297406 -258085 - DMCR1A LINE CR1 -969 3501 3247 4 602 1195 126 87 5 chr3LHet 2297400 2297607 -257884 - DMCR1A LINE CR1 -1476 2994 2771 4 602 478 113 0 0 chr3LHet 2297611 2297682 -257809 - DMCR1A LINE CR1 -1874 2596 2526 4 602 282 174 70 102 chr3LHet 2297685 2297813 -257678 + BS LINE Jockey 36 159 -4967 4 602 345 375 35 37 chr3LHet 2297826 2298200 -257291 + BS LINE Jockey 465 837 -4289 4 602 333 169 39 0 chr3LHet 2298300 2298377 -257114 + BS LINE Jockey 973 1052 -4074 4 602 2146 308 94 53 chr3LHet 2298430 2300223 -255268 + BS LINE Jockey 1165 3030 -2096 4 602 789 239 107 11 chr3LHet 2300286 2300557 -254934 + BS LINE Jockey 3142 3438 -1688 4 602 1103 192 51 33 chr3LHet 2300616 2300891 -254600 - DMCR1A LINE CR1 -2065 2405 2126 4 602 39 50 0 0 chr3LHet 2302884 2302944 -252547 + AT_rich Low_complexity Low_complexity 1 60 0 4 602 566 201 0 65 chr3LHet 2303466 2303636 -251855 - Gypsy8_I LTR Gypsy -4123 224 66 4 602 394 235 36 73 chr3LHet 2304163 2304328 -251163 + MDG3_I LTR Gypsy 3179 3337 -1649 4 602 1275 84 217 20 chr3LHet 2304553 2304853 -250638 + PROTOP_B DNA P 7 365 -788 4 602 2260 18 0 78 chr3LHet 2304856 2305163 -250328 + DM176_LTR LTR Gypsy 1 283 -224 4 602 2080 28 16 0 chr3LHet 2305164 2305417 -250074 + DM176_LTR LTR Gypsy 251 507 0 4 602 3778 80 69 13 chr3LHet 2305419 2306151 -249340 + PROTOP_B DNA P 353 1153 0 4 602 1461 198 70 86 chr3LHet 2306345 2306820 -248671 + DNAREP1_DM LINE Penelope 123 589 -5 4 602 1435 141 28 8 chr3LHet 2307019 2307269 -248222 - DMCR1A LINE CR1 -969 3501 3247 4 602 1195 126 87 5 chr3LHet 2307263 2307470 -248021 - DMCR1A LINE CR1 -1476 2994 2771 4 602 478 113 0 0 chr3LHet 2307474 2307545 -247946 - DMCR1A LINE CR1 -1874 2596 2526 4 602 282 174 70 102 chr3LHet 2307548 2307676 -247815 + BS LINE Jockey 36 159 -4967 4 602 476 334 105 40 chr3LHet 2307689 2308241 -247250 + BS LINE Jockey 465 1052 -4074 4 602 1978 304 116 50 chr3LHet 2308294 2310045 -245446 + BS LINE Jockey 1165 3030 -2096 4 602 789 239 107 11 chr3LHet 2310108 2310379 -245112 + BS LINE Jockey 3142 3438 -1688 4 602 1103 192 51 33 chr3LHet 2310438 2310713 -244778 - DMCR1A LINE CR1 -2065 2405 2126 4 602 38 51 0 0 chr3LHet 2312742 2312801 -242690 + AT_rich Low_complexity Low_complexity 1 59 0 4 602 230 230 3 0 chr3LHet 2312825 2312893 -242598 + QUASIMODO_I LTR Gypsy 2376 2419 -3641 4 602 566 201 0 65 chr3LHet 2313357 2313527 -241964 - Gypsy8_I LTR Gypsy -4123 224 66 4 602 397 235 36 73 chr3LHet 2314054 2314219 -241272 + MDG3_I LTR Gypsy 3179 3337 -1649 4 602 1275 84 217 20 chr3LHet 2314444 2314744 -240747 + PROTOP_B DNA P 7 365 -788 4 602 2260 18 0 78 chr3LHet 2314747 2315054 -240437 + DM176_LTR LTR Gypsy 1 283 -224 4 602 2080 28 16 0 chr3LHet 2315055 2315308 -240183 + DM176_LTR LTR Gypsy 251 507 0 4 602 3778 97 66 24 chr3LHet 2315310 2316042 -239449 + PROTOP_B DNA P 355 1153 0 4 602 1410 130 133 208 chr3LHet 2316236 2316741 -238750 + DNAREP1_DM LINE Penelope 123 589 -5 4 602 1450 145 28 8 chr3LHet 2316940 2317190 -238301 - DMCR1A LINE CR1 -969 3501 3247 4 602 1195 126 87 5 chr3LHet 2317184 2317391 -238100 - DMCR1A LINE CR1 -1476 2994 2771 4 602 478 113 0 0 chr3LHet 2317395 2317466 -238025 - DMCR1A LINE CR1 -1874 2596 2526 4 602 282 174 70 102 chr3LHet 2317469 2317597 -237894 + BS LINE Jockey 36 159 -4967 4 602 476 334 105 40 chr3LHet 2317610 2318162 -237329 + BS LINE Jockey 465 1052 -4074 4 602 1978 304 116 50 chr3LHet 2318215 2319966 -235525 + BS LINE Jockey 1165 3030 -2096 4 602 789 239 107 11 chr3LHet 2320029 2320300 -235191 + BS LINE Jockey 3142 3438 -1688 4 602 1103 192 51 33 chr3LHet 2320359 2320634 -234857 - DMCR1A LINE CR1 -2065 2405 2126 4 602 38 51 0 0 chr3LHet 2322663 2322722 -232769 + AT_rich Low_complexity Low_complexity 1 59 0 4 602 230 230 3 0 chr3LHet 2322746 2322814 -232677 + QUASIMODO_I LTR Gypsy 2376 2419 -3641 4 602 566 201 0 65 chr3LHet 2323278 2323448 -232043 - Gypsy8_I LTR Gypsy -4123 224 66 4 602 397 235 36 73 chr3LHet 2323975 2324140 -231351 + MDG3_I LTR Gypsy 3179 3337 -1649 4 602 6513 76 106 24 chr3LHet 2324343 2325408 -230083 + PROTOP_B DNA P 1 1153 0 4 602 1461 198 70 86 chr3LHet 2325602 2326077 -229414 + DNAREP1_DM LINE Penelope 123 589 -5 4 602 1435 141 28 8 chr3LHet 2326276 2326526 -228965 - DMCR1A LINE CR1 -969 3501 3247 4 602 1195 126 87 5 chr3LHet 2326520 2326727 -228764 - DMCR1A LINE CR1 -1476 2994 2771 4 602 478 113 0 0 chr3LHet 2326731 2326802 -228689 - DMCR1A LINE CR1 -1874 2596 2526 4 602 282 174 70 102 chr3LHet 2326805 2326933 -228558 + BS LINE Jockey 36 159 -4967 4 602 345 375 35 37 chr3LHet 2326946 2327320 -228171 + BS LINE Jockey 465 837 -4289 4 602 278 184 53 0 chr3LHet 2327420 2327496 -227995 + BS LINE Jockey 973 1052 -4074 4 603 23255 4 0 3 chr3LHet 2373517 2376125 -179366 + DOC LINE Jockey 2119 4719 -6 4 603 1993 239 141 8 chr3LHet 2376120 2376772 -178719 + BS LINE Jockey 2060 2798 -2328 4 603 761 250 107 11 chr3LHet 2377022 2377293 -178198 + BS LINE Jockey 3142 3438 -1688 4 603 2323 165 30 24 chr3LHet 2377352 2377817 -177674 - DMCR1A LINE CR1 -2065 2405 1938 4 603 378 77 19 0 chr3LHet 2377832 2377884 -177607 + DOC4_DM LINE Jockey 2494 2546 -245 4 603 37 52 0 0 chr3LHet 2379948 2380006 -175485 + AT_rich Low_complexity Low_complexity 1 58 0 4 603 13980 11 30 1 chr3LHet 2380044 2381694 -173797 + ROO_I LTR Pao 4410 6108 -2148 4 603 13719 19 0 2 chr3LHet 2381694 2383327 -172164 + ROO_I LTR Pao 6628 8256 0 4 603 3674 28 2 0 chr3LHet 2383327 2383754 -171737 + ROO_LTR LTR Pao 1 428 0 4 603 9159 40 18 7 chr3LHet 2384162 2385307 -170184 - IVK_DM LINE I 0 5402 4245 4 603 564 0 0 0 chr3LHet 2385307 2385370 -170121 + FB4_DM DNA Tc1 1 63 -4026 4 603 4501 25 5 11 chr3LHet 2385368 2385934 -169557 + FB4_DM DNA Tc1 3527 4089 0 4 603 6201 32 30 0 chr3LHet 2385934 2386689 -168802 - IVK_DM LINE I -1149 4253 3476 4 603 9166 85 35 36 chr3LHet 2386688 2388135 -167356 + CIRCE LINE Composite 3516 4960 -1396 4 603 19362 95 45 57 chr3LHet 2388149 2391546 -163945 - IVK_DM LINE I -2044 3358 1 4 603 22 0 0 0 chr3LHet 2392042 2392064 -163427 + AT_rich Low_complexity Low_complexity 1 22 0 4 603 42 86 0 0 chr3LHet 2392895 2393000 -162491 + AT_rich Low_complexity Low_complexity 1 105 0 4 603 21 36 0 0 chr3LHet 2393275 2393303 -162188 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 9437 123 54 31 chr3LHet 2393358 2395055 -160436 + S_DM DNA Tc1 1 1736 0 4 603 1559 161 191 2 chr3LHet 2395399 2395829 -159662 - PROTOP DNA P -475 4005 3495 4 603 34 24 0 0 chr3LHet 2395879 2395920 -159571 + AT_rich Low_complexity Low_complexity 1 41 0 4 603 1068 163 201 28 chr3LHet 2395920 2396530 -158961 - PROTOP DNA P -3463 1017 256 4 603 30 27 0 0 chr3LHet 2396530 2396567 -158924 + AT_rich Low_complexity Low_complexity 1 37 0 4 603 970 157 98 9 chr3LHet 2396829 2397201 -158290 - DNAREP1_DM LINE Penelope -2 592 20 4 603 345 206 28 38 chr3LHet 2399351 2399457 -156034 + DNAREP1_DM LINE Penelope 98 202 -392 4 603 1149 190 58 12 chr3LHet 2399501 2399741 -155750 + DNAREP1_DM LINE Penelope 324 574 -20 4 603 366 27 0 9 chr3LHet 2399741 2399806 -155685 - PROTOP_B DNA P 0 1153 1046 4 603 28 61 0 0 chr3LHet 2399849 2399898 -155593 + AT_rich Low_complexity Low_complexity 1 49 0 4 603 285 177 0 46 chr3LHet 2400640 2400705 -154786 - Gypsy2_LTR LTR Gypsy -180 173 112 4 603 453 301 9 9 chr3LHet 2400794 2401034 -154457 - Gypsy2_I LTR Gypsy -17 6160 5919 4 603 8112 215 70 37 chr3LHet 2401034 2402971 -152520 - Gypsy2_I LTR Gypsy -455 5680 3679 4 603 953 191 6 6 chr3LHet 2402960 2403134 -152357 - Gypsy2_I LTR Gypsy -3267 2868 2695 4 603 2631 284 46 8 chr3LHet 2403165 2404029 -151462 - Gypsy6_I LTR Gypsy -4026 2986 2090 4 603 875 260 82 0 chr3LHet 2404078 2404297 -151194 - Gypsy2_I LTR Gypsy -4595 1540 1304 4 603 1228 248 120 44 chr3LHet 2404307 2404847 -150644 - Gypsy2_I LTR Gypsy -5263 872 292 4 603 424 134 0 0 chr3LHet 2405072 2405139 -150352 + DMCR1A LINE CR1 2 68 -4402 4 603 13040 38 82 1 chr3LHet 2405138 2408583 -146908 + DMCR1A LINE CR1 736 4460 -10 4 603 602 93 144 0 chr3LHet 2409143 2409240 -146251 + DNAREP1_DM LINE Penelope 455 565 -29 4 603 26 50 0 0 chr3LHet 2410166 2410206 -145285 + AT_rich Low_complexity Low_complexity 1 40 0 4 603 230 108 27 0 chr3LHet 2410299 2410336 -145155 - PROTOP_B DNA P -607 546 509 4 603 3669 104 38 2 chr3LHet 2410556 2411143 -144348 + S_DM DNA Tc1 1 608 -1128 4 603 1532 65 5 0 chr3LHet 2411132 2411332 -144159 + S_DM DNA Tc1 715 915 -821 4 603 2524 106 17 0 chr3LHet 2411323 2411737 -143754 + S_DM DNA Tc1 1316 1736 0 4 603 1095 155 81 42 chr3LHet 2411929 2412165 -143326 - DNAREP1_DM LINE Penelope -3 591 347 4 603 6061 59 20 15 chr3LHet 2412148 2412939 -142552 + G5_DM LINE Jockey 4050 4844 -12 4 603 529 47 0 0 chr3LHet 2412968 2413032 -142459 - DNAREP1_DM LINE Penelope -529 65 2 4 603 1774 206 179 0 chr3LHet 2413055 2413590 -141901 - DM297_I LTR Gypsy -4291 1876 1246 4 603 303 143 0 0 chr3LHet 2413608 2413664 -141827 - DM297_I LTR Gypsy -5009 1158 1103 4 603 331 94 0 0 chr3LHet 2413663 2413716 -141775 - DM297_I LTR Gypsy -5273 894 842 4 603 1156 220 173 58 chr3LHet 2413727 2414370 -141121 - DM297_I LTR Gypsy -5450 717 1 4 603 353 217 172 16 chr3LHet 2414370 2414492 -140999 - DM297_LTR LTR Gypsy 0 414 274 4 603 1002 346 36 6 chr3LHet 2415791 2416317 -139174 - HMSBEAGLE_I LTR Gypsy -4538 1991 1450 4 603 32 95 0 0 chr3LHet 2416432 2416527 -138964 + AT_rich Low_complexity Low_complexity 1 95 0 4 603 7698 45 53 29 chr3LHet 2416684 2417771 -137720 - PROTOP_B DNA P -39 1114 1 4 603 1367 59 230 5 chr3LHet 2418677 2418898 -136593 - DNAREP1_DM LINE Penelope 0 594 324 4 603 5821 15 0 1 chr3LHet 2418898 2419578 -135913 - PROTOP DNA P 0 4480 3802 4 603 5976 33 30 42 chr3LHet 2419573 2419645 -135846 - PROTOP DNA P -3657 823 781 4 603 570 53 32 0 chr3LHet 2419645 2419740 -135751 + (TA)n Simple_repeat Simple_repeat 1 98 0 4 603 5976 33 30 42 chr3LHet 2419740 2420500 -134991 - PROTOP DNA P -3700 780 1 4 603 996 153 10 15 chr3LHet 2420500 2420705 -134786 - DNAREP1_DM LINE Penelope -264 330 127 4 603 204 200 0 0 chr3LHet 2420706 2420756 -134735 + (TAG)n Simple_repeat Simple_repeat 1 50 0 4 603 342 88 0 34 chr3LHet 2420757 2420816 -134675 - DNAREP1_DM LINE Penelope -352 242 186 4 603 628 185 219 28 chr3LHet 2422449 2422627 -132864 + DNAREP1_DM LINE Penelope 337 548 -46 4 603 1082 123 192 98 chr3LHet 2422877 2423308 -132183 + DNAREP1_DM LINE Penelope 58 395 -199 4 603 21 0 0 0 chr3LHet 2423341 2423362 -132129 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 1767 139 152 0 chr3LHet 2423835 2424308 -131183 + FB4_DM DNA Tc1 1112 1656 -2433 4 603 249 32 0 0 chr3LHet 2424308 2424339 -131152 - FB4_DM DNA Tc1 0 4089 4059 4 603 415 139 0 0 chr3LHet 2424355 2424427 -131064 - PROTOP DNA P -3399 1081 1010 4 603 2824 77 205 28 chr3LHet 2424429 2425027 -130464 - PROTOP DNA P -3773 707 1 4 603 2143 267 26 9 chr3LHet 2425027 2425602 -129889 + Invader3_I LTR Gypsy 13 597 -4291 4 603 535 55 0 0 chr3LHet 2425602 2425674 -129817 + TRANSIB2 DNA Transib 2 73 -2771 4 603 3736 19 2 0 chr3LHet 2425674 2426101 -129390 - ROO_LTR LTR Pao 0 428 1 4 603 11739 71 109 47 chr3LHet 2426102 2428402 -127089 + TRANSIB2 DNA Transib 70 2512 -332 4 603 1155 203 0 89 chr3LHet 2428430 2428689 -126802 + Invader3_I LTR Gypsy 629 864 -4024 4 603 730 216 65 0 chr3LHet 2428688 2428841 -126650 + Invader3_I LTR Gypsy 762 924 -3964 4 603 470 205 9 35 chr3LHet 2428849 2428965 -126526 - PROTOP_B DNA P -168 985 873 4 603 54 68 0 0 chr3LHet 2429056 2429159 -126332 + AT_rich Low_complexity Low_complexity 1 103 0 4 603 564 126 103 75 chr3LHet 2429185 2429331 -126160 - PROTOP_B DNA P -656 497 348 4 603 3806 330 45 42 chr3LHet 2429682 2432691 -122800 + Invader6_I LTR Gypsy 1 3021 -1078 4 603 427 292 0 8 chr3LHet 2432685 2432816 -122675 + Invader1_I LTR Gypsy 1526 1655 -1531 4 603 456 224 122 34 chr3LHet 2432831 2432979 -122512 + MICROPIA_I LTR Gypsy 3145 3305 -1171 4 603 514 125 108 79 chr3LHet 2432972 2433111 -122380 - PROTOP_B DNA P -663 490 348 4 603 3808 328 46 42 chr3LHet 2433462 2436471 -119020 + Invader6_I LTR Gypsy 1 3021 -1078 4 603 445 285 0 8 chr3LHet 2436465 2436596 -118895 + Invader1_I LTR Gypsy 1526 1655 -1531 4 603 441 232 128 40 chr3LHet 2436611 2436759 -118732 + MICROPIA_I LTR Gypsy 3145 3305 -1171 4 603 498 130 154 54 chr3LHet 2436752 2436882 -118609 - PROTOP_B DNA P -663 490 348 4 603 3829 329 45 42 chr3LHet 2437233 2440242 -115249 + Invader6_I LTR Gypsy 1 3021 -1078 4 603 445 285 0 8 chr3LHet 2440236 2440367 -115124 + Invader1_I LTR Gypsy 1526 1655 -1531 4 603 441 232 128 40 chr3LHet 2440382 2440530 -114961 + MICROPIA_I LTR Gypsy 3145 3305 -1171 4 603 514 125 108 79 chr3LHet 2440523 2440662 -114829 - PROTOP_B DNA P -663 490 348 4 603 3806 327 45 40 chr3LHet 2441013 2444883 -110608 + Invader6_I LTR Gypsy 1 3876 -600 4 603 228 114 0 0 chr3LHet 2445482 2445517 -109974 + Invader1_I LTR Gypsy 3152 3186 0 4 603 247 150 0 0 chr3LHet 2445883 2445943 -109548 - PROTOP_B DNA P -800 353 294 4 603 640 123 53 0 chr3LHet 2445969 2446083 -109408 - Invader3_I LTR Gypsy -1095 3793 3674 4 603 792 300 22 11 chr3LHet 2446080 2446356 -109135 + G5_DM LINE Jockey 3611 3889 -967 4 603 233 159 0 0 chr3LHet 2446398 2446442 -109049 + G5A_DM LINE Jockey 2033 2076 -765 4 603 278 139 25 89 chr3LHet 2446537 2446616 -108875 - Gypsy_LTR LTR Gypsy -110 372 299 4 603 425 144 86 32 chr3LHet 2446677 2446770 -108721 - Gypsy_LTR LTR Gypsy -384 98 1 4 603 54 49 0 0 chr3LHet 2446776 2446858 -108633 + AT_rich Low_complexity Low_complexity 1 82 0 4 603 11132 41 68 4 chr3LHet 2446858 2449255 -106236 - Baggins1 LINE LOA 0 5453 2903 4 603 23 0 0 0 chr3LHet 2449257 2449280 -106211 + AT_rich Low_complexity Low_complexity 1 23 0 4 603 6326 25 11 2 chr3LHet 2449561 2450370 -105121 + M4DM DNA Transib 1 816 -619 4 603 2415 27 0 0 chr3LHet 2450380 2450680 -104811 + M4DM DNA Transib 1136 1435 0 4 603 4179 50 53 2 chr3LHet 2451226 2451791 -103700 - DMCR1A LINE CR1 0 4470 3877 4 603 297 265 71 10 chr3LHet 2452013 2452211 -103280 - QUASIMODO_I LTR Gypsy 0 6060 5851 4 603 2795 279 42 11 chr3LHet 2452252 2453596 -101895 - QUASIMODO_I LTR Gypsy -307 5753 4368 4 603 314 93 0 0 chr3LHet 2454564 2454607 -100884 - DNAREP1_DM LINE Penelope -158 436 394 4 603 279 235 86 0 chr3LHet 2454742 2454823 -100668 + DNAREP1_DM LINE Penelope 507 594 0 4 603 38 22 0 0 chr3LHet 2454885 2454930 -100561 + AT_rich Low_complexity Low_complexity 1 45 0 4 603 1398 215 109 23 chr3LHet 2455377 2455853 -99638 - DNAREP1_DM LINE Penelope 0 594 78 4 603 2530 35 9 0 chr3LHet 2455901 2456218 -99273 + PROTOP_B DNA P 834 1153 0 4 603 1599 263 69 98 chr3LHet 2456242 2457225 -98266 - Gypsy7_I LTR Gypsy -3107 1877 1004 4 603 308 141 83 14 chr3LHet 2457573 2457645 -97846 - DM297_LTR LTR Gypsy -56 358 282 4 603 1812 250 120 23 chr3LHet 2457888 2460181 -95310 - DM297_I LTR Gypsy -19 6148 3633 4 603 269 168 192 40 chr3LHet 2460443 2460542 -94949 - Invader3_I LTR Gypsy -2127 2761 2648 4 603 227 282 16 33 chr3LHet 2460528 2460649 -94842 - Gypsy_I LTR Gypsy -1543 4964 4846 4 603 231 326 17 17 chr3LHet 2460727 2460902 -94589 - BURDOCK_I LTR Gypsy -1260 4600 4426 4 603 866 75 172 0 chr3LHet 2460952 2461086 -94405 - DNAREP1_DM LINE Penelope 0 594 438 4 603 244 150 25 0 chr3LHet 2461108 2461188 -94303 + (TA)n Simple_repeat Simple_repeat 2 83 0 4 603 439 150 70 17 chr3LHet 2461188 2461303 -94188 - DNAREP1_DM LINE Penelope -336 258 138 4 603 256 228 0 0 chr3LHet 2461743 2461800 -93691 - Jockey2 LINE Jockey -1719 1709 1653 4 603 423 122 12 0 chr3LHet 2462677 2462759 -92732 - DNAREP1_DM LINE Penelope -433 161 79 4 603 600 207 59 13 chr3LHet 2463176 2463328 -92163 - DMLTR5 LTR Gypsy -6 260 102 4 603 620 157 0 0 chr3LHet 2463492 2463600 -91891 - HMSBEAGLE_I LTR Gypsy 0 6529 6422 4 603 296 71 0 0 chr3LHet 2463702 2463744 -91747 - HMSBEAGLE_I LTR Gypsy -124 6405 6364 4 603 1488 211 74 112 chr3LHet 2463999 2464580 -90911 - HMSBEAGLE_I LTR Gypsy -161 6368 5810 4 603 23662 140 26 11 chr3LHet 2464957 2468984 -86507 - HMSBEAGLE_I LTR Gypsy -880 5649 1562 4 603 511 212 0 0 chr3LHet 2468974 2469073 -86418 - HMSBEAGLE_I LTR Gypsy -5219 1310 1212 4 603 52 30 0 0 chr3LHet 2469240 2469306 -86185 + AT_rich Low_complexity Low_complexity 1 66 0 4 603 1674 115 79 65 chr3LHet 2469325 2469679 -85812 - HMSBEAGLE_I LTR Gypsy -6170 359 1 4 603 368 161 0 58 chr3LHet 2469696 2469782 -85709 - DMLTR5 LTR Gypsy -95 171 91 4 603 22 56 0 0 chr3LHet 2471431 2471467 -84024 + AT_rich Low_complexity Low_complexity 1 36 0 4 603 1400 149 96 36 chr3LHet 2472251 2472607 -82884 + QUASIMODO_LTR LTR Gypsy 256 632 -26 4 603 34 55 0 0 chr3LHet 2473146 2473201 -82290 + AT_rich Low_complexity Low_complexity 1 55 0 4 603 1687 54 79 0 chr3LHet 2473536 2473776 -81715 - Gypsy10_LTR LTR Gypsy 0 364 106 4 603 273 158 140 0 chr3LHet 2474126 2474183 -81308 - DNAREP1_DM LINE Penelope -510 84 20 4 603 406 149 62 171 chr3LHet 2474344 2474490 -81001 + Gypsy3_LTR LTR Gypsy 1 130 -268 4 603 903 182 44 23 chr3LHet 2474491 2474720 -80771 + Gypsy3_I LTR Gypsy 4439 4699 -1478 4 603 1596 264 19 9 chr3LHet 2474763 2475225 -80266 + Gypsy3_I LTR Gypsy 5415 5881 -296 4 603 781 116 159 17 chr3LHet 2475252 2475428 -80063 - DNAREP1_DM LINE Penelope -232 362 162 4 603 3169 68 113 1 chr3LHet 2475433 2476122 -79369 - R1-2_DM LINE R1 -1524 1692 927 4 603 624 171 24 0 chr3LHet 2476179 2476302 -79189 - PROTOP_B DNA P -945 208 83 4 603 341 155 0 0 chr3LHet 2476329 2476387 -79104 - Invader3_LTR LTR Gypsy -147 151 94 4 603 2660 166 167 15 chr3LHet 2476443 2477160 -78331 - Invader3_I LTR Gypsy 0 4888 4063 4 603 3321 148 188 17 chr3LHet 2477176 2478182 -77309 - Invader3_I LTR Gypsy -893 3995 2819 4 603 22 35 0 0 chr3LHet 2478402 2478431 -77060 + AT_rich Low_complexity Low_complexity 1 29 0 4 603 302 184 26 13 chr3LHet 2478578 2478655 -76836 - Gypsy8_I LTR Gypsy -4268 79 2 4 603 300 193 91 68 chr3LHet 2478657 2478910 -76581 - Gypsy8_LTR LTR Gypsy -1 303 1 4 603 5911 102 49 53 chr3LHet 2479131 2480288 -75203 - PROTOP_B DNA P 0 1153 1 4 603 268 109 17 83 chr3LHet 2482069 2482129 -73362 + DNAREP1_DM LINE Penelope 492 547 -47 4 603 450 82 165 0 chr3LHet 2482195 2482280 -73211 + DNAREP1_DM LINE Penelope 496 594 0 4 603 250 30 0 29 chr3LHet 2482307 2482341 -73150 + DNAREP1_DM LINE Penelope 8 40 -554 4 603 503 288 9 26 chr3LHet 2482330 2482558 -72933 + TV1I LTR Gypsy 2873 3096 -2867 4 603 992 153 37 0 chr3LHet 2482559 2482748 -72743 - Invader3_I LTR Gypsy -2133 2755 2560 4 603 4428 48 150 36 chr3LHet 2482809 2483504 -71987 - G3_DM LINE Jockey -23 4582 3809 4 603 395 148 182 0 chr3LHet 2483497 2483585 -71906 - Invader3_I LTR Gypsy -2322 2566 2463 4 603 887 162 209 8 chr3LHet 2483583 2483832 -71659 - Invader3_I LTR Gypsy -3034 1854 1556 4 603 203 318 0 27 chr3LHet 2484265 2484375 -71116 + (CAA)n Simple_repeat Simple_repeat 3 109 0 4 603 424 282 59 75 chr3LHet 2485695 2486008 -69483 + G2_DM LINE Jockey 1792 2080 -1022 4 603 21 71 0 0 chr3LHet 2486732 2486774 -68717 + AT_rich Low_complexity Low_complexity 1 42 0 4 603 184 30 61 0 chr3LHet 2486774 2486807 -68684 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 603 562 138 326 21 chr3LHet 2487201 2487385 -68106 + DNAREP1_DM LINE Penelope 188 427 -167 4 603 367 98 0 16 chr3LHet 2487386 2487448 -68043 + DNAREP1_DM LINE Penelope 534 594 0 4 603 25 51 0 0 chr3LHet 2487549 2487588 -67903 + AT_rich Low_complexity Low_complexity 1 39 0 4 603 884 186 51 21 chr3LHet 2489784 2490020 -65471 + DNAREP1_DM LINE Penelope 1 243 -351 4 603 311 68 0 0 chr3LHet 2490043 2490087 -65404 - PROTOP_B DNA P -1109 44 1 4 603 494 266 75 0 chr3LHet 2490186 2490359 -65132 - DIVER2_I LTR Pao -3306 841 656 4 604 23 0 0 0 chr3LHet 2492155 2492178 -63313 + AT_rich Low_complexity Low_complexity 1 23 0 4 604 260 240 40 0 chr3LHet 2492576 2492651 -62840 - Gypsy5_I LTR Gypsy -1234 5275 5198 4 604 52 17 0 0 chr3LHet 2492654 2492713 -62778 + AT_rich Low_complexity Low_complexity 1 59 0 4 604 782 288 60 42 chr3LHet 2492929 2493534 -61957 - ZAM_I LTR Gypsy -1922 5770 4979 4 604 3564 5 0 0 chr3LHet 2493541 2493948 -61543 - Gypsy6_LTR LTR Gypsy 0 407 1 4 604 37101 14 32 3 chr3LHet 2493950 2500000 -55491 - Gypsy6_I LTR Gypsy 0 7012 790 4 604 7204 1 1 0 chr3LHet 2500000 2500788 -54703 - Gypsy6_I LTR Gypsy -6223 789 1 4 604 3751 0 0 0 chr3LHet 2500788 2501195 -54296 - Gypsy6_LTR LTR Gypsy 0 407 1 4 604 311 313 20 24 chr3LHet 2501207 2501456 -54035 - ACCORD2_I LTR Gypsy -1373 5839 5592 4 604 2249 310 50 9 chr3LHet 2501611 2502734 -52757 - Gypsy5_I LTR Gypsy -3164 4326 2164 4 604 976 23 54 0 chr3LHet 2502788 2502917 -52574 + BS LINE Jockey 4990 5125 -1 4 604 293 184 13 13 chr3LHet 2503212 2503289 -52202 - ZAM_I LTR Gypsy -4740 2750 2674 4 604 227 261 56 22 chr3LHet 2503423 2503513 -51978 - ACCORD_I LTR Gypsy -4191 2097 2005 4 604 24 32 0 0 chr3LHet 2503895 2503926 -51565 + AT_rich Low_complexity Low_complexity 1 31 0 4 604 545 324 124 33 chr3LHet 2504358 2505209 -50282 - Gypsy_DS LTR Gypsy -611 6911 5984 4 604 225 226 0 19 chr3LHet 2505825 2505879 -49612 - ACCORD2_I LTR Gypsy -8 7204 7152 4 604 540 296 75 39 chr3LHet 2506656 2507011 -48480 - Gypsy5_I LTR Gypsy -1623 4886 4532 4 604 329 34 68 0 chr3LHet 2507011 2507070 -48421 + (TTA)n Simple_repeat Simple_repeat 3 65 0 4 604 540 296 75 39 chr3LHet 2507070 2507181 -48310 - Gypsy5_I LTR Gypsy -1978 4531 4404 4 604 2393 297 94 14 chr3LHet 2507427 2508704 -46787 - ZAM_I LTR Gypsy -2958 4532 3154 4 604 232 236 41 41 chr3LHet 2509090 2509187 -46304 - TIRANT_I LTR Gypsy -4758 2934 2838 4 604 12116 90 5 2 chr3LHet 2510317 2512048 -43443 - S_DM DNA Tc1 0 1736 1 4 604 8295 20 66 11 chr3LHet 2512259 2513306 -42185 + PROTOP_A DNA P 1 1105 0 4 604 180 0 0 0 chr3LHet 2513819 2513839 -41652 + (TATG)n Simple_repeat Simple_repeat 3 22 0 4 604 691 249 19 33 chr3LHet 2514481 2514693 -40798 - GTWIN_I LTR Gypsy -1491 4930 4722 4 604 3124 9 0 0 chr3LHet 2515448 2515794 -39697 - Invader4_LTR LTR Gypsy 0 346 1 4 604 17945 16 23 7 chr3LHet 2515794 2518112 -37379 - Invader4_I LTR Gypsy 0 2413 1 4 604 3124 9 0 0 chr3LHet 2518112 2518458 -37033 - Invader4_LTR LTR Gypsy 0 346 1 4 604 24 32 0 0 chr3LHet 2518474 2518505 -36986 + AT_rich Low_complexity Low_complexity 1 31 0 4 604 245 184 0 0 chr3LHet 2518524 2518573 -36918 - TIRANT_I LTR Gypsy -660 7032 6984 4 604 1725 59 8 0 chr3LHet 2518614 2518869 -36622 - S_DM DNA Tc1 0 1736 1480 4 604 515 336 53 21 chr3LHet 2519729 2520266 -35225 - ZAM_I LTR Gypsy -1844 5646 5341 4 604 454 296 12 36 chr3LHet 2520305 2520554 -34937 - ZAM_I LTR Gypsy -2288 4221 3979 4 604 932 302 75 2 chr3LHet 2521000 2521399 -34092 - TIRANT_I LTR Gypsy -3005 4687 4260 4 604 306 289 0 0 chr3LHet 2521416 2521499 -33992 + MICROPIA_I LTR Gypsy 2227 2309 -2167 4 604 233 288 0 0 chr3LHet 2521506 2521572 -33919 + Invader6_I LTR Gypsy 3163 3228 -871 4 604 2253 118 124 7 chr3LHet 2521688 2522108 -33383 + Invader1_I LTR Gypsy 2718 3186 0 4 604 2226 152 21 42 chr3LHet 2522108 2522540 -32951 + Invader1_LTR LTR Gypsy 1 423 0 4 604 1969 44 44 0 chr3LHet 2522540 2522785 -32706 - STALKER4_LTR LTR Gypsy -146 256 1 4 604 4131 102 44 8 chr3LHet 2522785 2523542 -31949 - STALKER4_I LTR Gypsy 0 6530 5722 4 604 37262 32 19 6 chr3LHet 2523538 2528337 -27154 - STALKER4_I LTR Gypsy -1330 5200 291 4 604 25 0 0 0 chr3LHet 2528361 2528386 -27105 + AT_rich Low_complexity Low_complexity 1 25 0 4 604 3193 58 1 14 chr3LHet 2528474 2528905 -26586 - STALKER4_LTR LTR Gypsy -3 399 9 4 604 5467 81 6 2 chr3LHet 2528915 2529722 -25769 - STALKER4_I LTR Gypsy 0 6530 5721 4 604 38099 36 22 11 chr3LHet 2529718 2534595 -20896 - STALKER4_I LTR Gypsy -1330 5200 268 4 604 180 0 0 0 chr3LHet 2534604 2534624 -20867 + (TTA)n Simple_repeat Simple_repeat 1 20 0 4 604 23 0 0 0 chr3LHet 2534633 2534656 -20835 + AT_rich Low_complexity Low_complexity 1 23 0 4 604 2784 55 33 0 chr3LHet 2534789 2535151 -20340 - STALKER4_LTR LTR Gypsy -28 374 1 4 604 21 0 0 0 chr3LHet 2536860 2536881 -18610 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 255 190 37 65 chr3LHet 2537110 2537217 -18274 + T-rich Low_complexity Low_complexity 2 105 0 4 604 4141 42 76 2 chr3LHet 2538369 2538922 -16569 - IDEFIX_LTR LTR Gypsy 0 594 1 4 604 252 125 0 0 chr3LHet 2538890 2538930 -16561 + BARI1 DNA Tc1 3 42 -1708 4 604 375 307 0 32 chr3LHet 2539159 2539317 -16174 - GTWIN_I LTR Gypsy -1795 4712 4560 4 604 962 295 68 17 chr3LHet 2539324 2539799 -15692 - GTWIN_I LTR Gypsy -2070 4437 3942 4 604 335 274 43 2 chr3LHet 2539965 2540113 -15378 - Gypsy_DS LTR Gypsy -3429 4093 3972 4 604 345 316 12 6 chr3LHet 2540417 2540586 -14905 - Gypsy4_I LTR Gypsy -975 5313 5144 4 604 285 293 50 0 chr3LHet 2540628 2540727 -14764 - Gypsy4_I LTR Gypsy -1259 5029 4926 4 604 1281 129 124 4 chr3LHet 2540801 2541042 -14449 + DNAREP1_DM LINE Penelope 4 273 -321 4 604 365 339 6 12 chr3LHet 2541213 2541383 -14108 - Gypsy4_I LTR Gypsy -1797 4491 4323 4 604 282 188 62 0 chr3LHet 2541451 2541515 -13976 - Gypsy4_I LTR Gypsy -2704 3584 3517 4 604 262 253 89 0 chr3LHet 2541747 2541826 -13665 - Gypsy_I LTR Gypsy -5324 1183 1098 4 604 984 125 54 0 chr3LHet 2541849 2542017 -13474 + DMCR1A LINE CR1 4123 4299 -171 4 604 1436 130 121 16 chr3LHet 2542019 2542382 -13109 - DNAREP1_DM LINE Penelope -262 332 1 4 604 503 265 68 18 chr3LHet 2542379 2542597 -12894 - Gypsy_I LTR Gypsy -4497 2010 1797 4 604 270 290 12 0 chr3LHet 2542893 2542980 -12511 - Gypsy_I LTR Gypsy -6048 1474 1397 4 604 328 212 11 34 chr3LHet 2543057 2543145 -12346 - Gypsy6_LTR LTR Gypsy -168 239 154 4 604 25 0 0 0 chr3LHet 2543617 2543642 -11849 + AT_rich Low_complexity Low_complexity 1 25 0 4 604 1536 144 145 20 chr3LHet 2544022 2544489 -11002 - DNAREP1_DM LINE Penelope 0 594 117 4 604 330 167 0 0 chr3LHet 2544789 2544843 -10648 - DMCR1A LINE CR1 0 4470 4417 4 604 21 57 0 0 chr3LHet 2545605 2545640 -9851 + AT_rich Low_complexity Low_complexity 1 35 0 4 604 24 53 0 0 chr3LHet 2546390 2546428 -9063 + AT_rich Low_complexity Low_complexity 1 38 0 4 604 22 35 0 0 chr3LHet 2546816 2546845 -8646 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 9393 77 40 13 chr3LHet 2547321 2548661 -6830 + BS LINE Jockey 9 1384 -3742 4 604 789 106 0 8 chr3LHet 2548657 2548781 -6710 + BS LINE Jockey 1844 1966 -3160 4 604 7737 67 118 0 chr3LHet 2548778 2550562 -4929 + BS LINE Jockey 3115 5108 -18 4 604 946 307 61 3 chr3LHet 2551301 2551628 -3863 - Gypsy3_I LTR Gypsy -458 5719 5374 4 604 722 156 92 18 chr3LHet 2551646 2551809 -3682 + DNAREP1_DM LINE Penelope 172 346 -248 4 604 819 188 78 17 chr3LHet 2551832 2552011 -3480 + DNAREP1_DM LINE Penelope 301 490 -104 4 604 2823 51 97 46 chr3LHet 2552012 2552482 -3009 - DM176_LTR LTR Gypsy -26 481 1 4 604 446 75 250 0 chr3LHet 2552483 2552563 -2928 + DNAREP1_DM LINE Penelope 495 594 0 4 604 25587 14 8 0 chr3LHet 2552576 2555491 0 - Gypsy4_I LTR Gypsy -1098 5190 2253 4 585 413 143 0 14 chr3L 17 88 -24543469 + HETRP_DM Satellite Satellite 1600 1669 -203 2 585 276 185 250 42 chr3L 246 342 -24543215 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 390 546 -24543011 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 704 800 -24542757 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 848 1004 -24542553 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 1162 1258 -24542299 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 1306 1462 -24542095 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 1620 1716 -24541841 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 1764 1920 -24541637 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 2078 2174 -24541383 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 2222 2378 -24541179 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 328 185 261 0 chr3L 2536 2628 -24540929 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 2676 2832 -24540725 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 2990 3086 -24540471 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 3134 3290 -24540267 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 3448 3544 -24540013 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 3592 3748 -24539809 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 3906 4002 -24539555 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 4050 4206 -24539351 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 4364 4460 -24539097 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 4508 4664 -24538893 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 4822 4918 -24538639 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 4966 5122 -24538435 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 5280 5376 -24538181 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 5424 5580 -24537977 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 328 185 261 0 chr3L 5738 5830 -24537727 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 5878 6034 -24537523 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 6192 6288 -24537269 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 6336 6492 -24537065 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 6650 6746 -24536811 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 6794 6950 -24536607 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 7108 7204 -24536353 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 7252 7408 -24536149 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 7566 7662 -24535895 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 7710 7866 -24535691 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 8024 8120 -24535437 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 8168 8324 -24535233 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 8482 8578 -24534979 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 8626 8782 -24534775 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 328 185 261 0 chr3L 8940 9032 -24534525 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 9080 9236 -24534321 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 9394 9490 -24534067 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 9538 9694 -24533863 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 9852 9948 -24533609 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 9996 10152 -24533405 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 10310 10406 -24533151 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 10454 10610 -24532947 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 10768 10864 -24532693 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 10912 11068 -24532489 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 11226 11322 -24532235 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 11370 11526 -24532031 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 11684 11780 -24531777 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 11828 11984 -24531573 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 328 185 261 0 chr3L 12142 12234 -24531323 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 12282 12438 -24531119 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 12596 12692 -24530865 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 12740 12896 -24530661 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 13054 13150 -24530407 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 13198 13354 -24530203 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 13512 13608 -24529949 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 13656 13812 -24529745 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 13970 14066 -24529491 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 14114 14270 -24529287 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 14428 14524 -24529033 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 14572 14728 -24528829 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 14886 14982 -24528575 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 15030 15186 -24528371 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 328 185 261 0 chr3L 15344 15436 -24528121 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 15484 15640 -24527917 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 15798 15894 -24527663 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 15942 16098 -24527459 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 16256 16352 -24527205 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 16400 16556 -24527001 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 16714 16810 -24526747 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 16858 17014 -24526543 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 17172 17268 -24526289 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 17316 17472 -24526085 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 17630 17726 -24525831 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 17774 17930 -24525627 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 18088 18184 -24525373 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 18232 18388 -24525169 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 18546 18642 -24524915 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 775 188 0 19 chr3L 18690 18847 -24524710 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 328 185 261 0 chr3L 19005 19097 -24524460 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 19145 19301 -24524256 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 276 185 250 42 chr3L 19459 19555 -24524002 + HETRP_DM Satellite Satellite 1519 1634 -238 2 585 787 170 6 19 chr3L 19603 19759 -24523798 + HETRP_DM Satellite Satellite 1516 1669 -203 2 585 455 158 8 116 chr3L 19862 19991 -24523566 + HETRP_DM Satellite Satellite 1555 1669 -203 2 585 2119 150 46 45 chr3L 20159 20882 -24522675 - DNAREP1_DM LINE Penelope 0 594 1 2 585 23 68 0 0 chr3L 21090 21134 -24522423 + AT_rich Low_complexity Low_complexity 1 44 0 2 585 27 29 0 0 chr3L 21188 21222 -24522335 + AT_rich Low_complexity Low_complexity 1 34 0 2 585 950 207 85 66 chr3L 21407 21866 -24521691 + DNAREP1_DM LINE Penelope 1 594 0 2 585 4713 2 0 2 chr3L 27653 28201 -24515356 + POGO DNA Pogo 1 547 -1574 2 585 5100 2 2 2 chr3L 28192 28800 -24514757 + POGO DNA Pogo 1514 2121 0 2 585 1819 109 54 11 chr3L 28805 29139 -24514418 + DNAREP1_DM LINE Penelope 4 335 -259 2 585 1057 189 41 8 chr3L 33786 34031 -24509526 + DNAREP1_DM LINE Penelope 2 254 -340 2 585 659 123 114 8 chr3L 34029 34152 -24509405 + DNAREP1_DM LINE Penelope 452 587 -7 2 585 247 203 2 79 chr3L 36040 36144 -24507413 + DNAREP1_DM LINE Penelope 152 336 -258 2 585 31 0 0 0 chr3L 36417 36448 -24507109 + AT_rich Low_complexity Low_complexity 1 31 0 2 585 226 191 0 0 chr3L 37327 37369 -24506188 - DNAREP1_DM LINE Penelope -525 69 28 2 585 270 219 52 52 chr3L 37748 37928 -24505629 + A-rich Low_complexity Low_complexity 1 180 0 2 585 1736 106 147 2 chr3L 38372 38850 -24504707 - DNAREP1_DM LINE Penelope -1 593 6 2 585 1251 107 45 2 chr3L 38876 39244 -24504313 - DNAREP1_DM LINE Penelope -172 422 1 2 585 27 29 0 0 chr3L 40806 40840 -24502717 + AT_rich Low_complexity Low_complexity 1 34 0 2 585 22 88 0 0 chr3L 41291 41348 -24502209 + AT_rich Low_complexity Low_complexity 1 57 0 2 585 372 152 152 0 chr3L 43411 43503 -24500054 + DNAREP1_DM LINE Penelope 36 141 -453 2 585 445 154 167 15 chr3L 43544 43676 -24499881 + DNAREP1_DM LINE Penelope 121 272 -322 2 585 1294 98 204 0 chr3L 45405 45789 -24497768 - DNAREP1_DM LINE Penelope 0 594 1 2 585 28 29 0 0 chr3L 47145 47180 -24496377 + AT_rich Low_complexity Low_complexity 1 35 0 2 585 473 154 110 0 chr3L 48481 48572 -24494985 + DNAREP1_DM LINE Penelope 392 492 -102 2 585 27 0 0 0 chr3L 49560 49587 -24493970 + AT_rich Low_complexity Low_complexity 1 27 0 2 585 26 30 0 0 chr3L 52237 52270 -24491287 + AT_rich Low_complexity Low_complexity 1 33 0 2 585 276 160 0 0 chr3L 52497 52547 -24491010 - DNAREP1_DM LINE Penelope -543 51 2 2 585 21 0 0 0 chr3L 52634 52655 -24490902 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 261 0 0 0 chr3L 53660 53689 -24489868 + (A)n Simple_repeat Simple_repeat 1 29 0 2 585 272 182 0 0 chr3L 55872 55927 -24487630 + DNAREP1_DM LINE Penelope 8 62 -532 2 585 497 100 0 0 chr3L 56038 56108 -24487449 + DNAREP1_DM LINE Penelope 316 385 -209 2 585 840 187 123 167 chr3L 56484 56914 -24486643 + DNAREP1_DM LINE Penelope 178 588 -6 2 585 987 192 143 7 chr3L 59717 59989 -24483568 + DNAREP1_DM LINE Penelope 119 565 -29 2 585 324 23 68 0 chr3L 61763 61807 -24481750 - DNAREP1_DM LINE Penelope -171 423 377 2 585 22 70 0 0 chr3L 62766 62809 -24480748 + AT_rich Low_complexity Low_complexity 1 43 0 2 585 1058 157 246 11 chr3L 64622 64899 -24478658 - DNAREP1_DM LINE Penelope -1 593 252 2 585 247 172 138 0 chr3L 64895 64953 -24478604 - DNAREP1_DM LINE Penelope -528 66 1 2 585 28 0 0 0 chr3L 65018 65046 -24478511 + AT_rich Low_complexity Low_complexity 1 28 0 2 585 26 64 0 0 chr3L 65476 65523 -24478034 + AT_rich Low_complexity Low_complexity 1 47 0 2 585 580 183 104 46 chr3L 65575 65844 -24477713 + DNAREP1_DM LINE Penelope 90 315 -279 2 585 393 113 113 0 chr3L 65859 65930 -24477627 + DNAREP1_DM LINE Penelope 486 564 -30 2 585 22 0 0 0 chr3L 72623 72645 -24470912 + AT_rich Low_complexity Low_complexity 1 22 0 2 585 275 72 0 23 chr3L 73334 73377 -24470180 + (CATA)n Simple_repeat Simple_repeat 2 43 0 2 585 189 109 55 0 chr3L 75985 76040 -24467517 + (TTTAA)n Simple_repeat Simple_repeat 5 62 0 2 585 216 67 0 0 chr3L 76383 76413 -24467144 + (T)n Simple_repeat Simple_repeat 1 30 0 2 585 22 0 0 0 chr3L 77990 78012 -24465545 + AT_rich Low_complexity Low_complexity 1 22 0 2 585 27 49 0 0 chr3L 78036 78077 -24465480 + AT_rich Low_complexity Low_complexity 1 41 0 2 585 1167 223 91 14 chr3L 78118 78468 -24465089 + DNAREP1_DM LINE Penelope 209 585 -9 2 585 21 36 0 0 chr3L 78636 78664 -24464893 + AT_rich Low_complexity Low_complexity 1 28 0 2 585 27 0 0 0 chr3L 80732 80759 -24462798 + AT_rich Low_complexity Low_complexity 1 27 0 2 585 23 33 0 0 chr3L 80831 80861 -24462696 + AT_rich Low_complexity Low_complexity 1 30 0 2 585 30 0 0 0 chr3L 82797 82827 -24460730 + AT_rich Low_complexity Low_complexity 1 30 0 2 585 229 36 0 0 chr3L 82932 82960 -24460597 - DNAREP1_DM LINE Penelope 0 594 567 2 585 845 132 266 32 chr3L 84578 84766 -24458791 - DNAREP1_DM LINE Penelope -38 556 325 2 585 23 33 0 0 chr3L 85015 85045 -24458512 + AT_rich Low_complexity Low_complexity 1 30 0 2 585 394 197 243 57 chr3L 85957 86097 -24457460 + DNAREP1_DM LINE Penelope 415 580 -14 2 585 1455 146 96 9 chr3L 91045 91479 -24452078 + DNAREP1_DM LINE Penelope 1 594 0 2 585 986 75 56 6 chr3L 91651 91811 -24451746 - DNAREP1_DM LINE Penelope -330 264 97 2 585 313 203 31 0 chr3L 92335 92399 -24451158 + DNAREP1_DM LINE Penelope 19 84 -510 2 585 492 118 0 0 chr3L 92426 92502 -24451055 + DNAREP1_DM LINE Penelope 519 594 0 2 585 239 189 147 13 chr3L 94735 94810 -24448747 + BS3_DM LINE Jockey 1701 1785 -5 2 585 38 39 0 0 chr3L 95345 95397 -24448160 + AT_rich Low_complexity Low_complexity 1 52 0 2 585 28 86 0 0 chr3L 96080 96150 -24447407 + AT_rich Low_complexity Low_complexity 1 70 0 2 585 35 95 0 0 chr3L 98768 98873 -24444684 + AT_rich Low_complexity Low_complexity 1 105 0 2 585 384 221 61 17 chr3L 98886 99001 -24444556 + DNAREP1_DM LINE Penelope 4 123 -471 2 585 1093 131 309 20 chr3L 100160 100567 -24442990 + DNAREP1_DM LINE Penelope 1 490 -104 2 585 21 0 0 0 chr3L 101161 101182 -24442375 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 21 0 0 0 chr3L 101715 101736 -24441821 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 21 0 0 0 chr3L 102473 102494 -24441063 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 21 0 0 0 chr3L 103232 103253 -24440304 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 234 267 22 22 chr3L 103424 103516 -24440041 + (TATG)n Simple_repeat Simple_repeat 2 93 0 2 585 25 0 0 0 chr3L 103804 103829 -24439728 + AT_rich Low_complexity Low_complexity 1 25 0 2 585 32 0 0 0 chr3L 103921 103953 -24439604 + AT_rich Low_complexity Low_complexity 1 32 0 2 585 21 36 0 0 chr3L 104034 104062 -24439495 + AT_rich Low_complexity Low_complexity 1 28 0 2 585 23 0 0 0 chr3L 107529 107552 -24436005 + AT_rich Low_complexity Low_complexity 1 23 0 2 585 29 0 0 0 chr3L 110111 110140 -24433417 + AT_rich Low_complexity Low_complexity 1 29 0 2 585 3931 0 0 0 chr3L 110266 110694 -24432863 - ROO_LTR LTR Pao 0 428 1 2 585 69915 2 2 2 chr3L 110694 118947 -24424610 - ROO_I LTR Pao 0 8256 1 2 585 3766 0 0 0 chr3L 118947 119375 -24424182 - ROO_LTR LTR Pao 0 428 1 2 585 225 0 0 0 chr3L 120756 120781 -24422776 + (T)n Simple_repeat Simple_repeat 1 25 0 2 585 22 35 0 0 chr3L 125093 125122 -24418435 + AT_rich Low_complexity Low_complexity 1 29 0 2 585 26 64 0 0 chr3L 125933 125980 -24417577 + AT_rich Low_complexity Low_complexity 1 47 0 2 585 24 53 0 0 chr3L 127912 127950 -24415607 + AT_rich Low_complexity Low_complexity 1 38 0 2 585 180 77 0 0 chr3L 128832 128858 -24414699 + (TATG)n Simple_repeat Simple_repeat 3 28 0 2 585 21 0 0 0 chr3L 128923 128944 -24414613 + AT_rich Low_complexity Low_complexity 1 21 0 2 585 26 93 0 0 chr3L 129192 129267 -24414290 + AT_rich Low_complexity Low_complexity 1 75 0 2 585 21 57 0 0 chr3L 130064 130099 -24413458 + AT_rich Low_complexity Low_complexity 1 35 0 2 586 327 25 0 0 chr3L 131426 131466 -24412091 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 586 30 27 0 0 chr3L 135392 135429 -24408128 + AT_rich Low_complexity Low_complexity 1 37 0 2 586 322 159 0 33 chr3L 136129 136220 -24407337 + ROO_I LTR Pao 637 724 -7532 2 586 21 0 0 0 chr3L 139012 139033 -24404524 + AT_rich Low_complexity Low_complexity 1 21 0 2 586 215 191 0 16 chr3L 140966 141030 -24402527 + CT-rich Low_complexity Low_complexity 2 64 0 2 586 30 0 0 0 chr3L 144077 144107 -24399450 + AT_rich Low_complexity Low_complexity 1 30 0 2 586 24 0 0 0 chr3L 144636 144660 -24398897 + AT_rich Low_complexity Low_complexity 1 24 0 2 586 26 50 0 0 chr3L 145186 145226 -24398331 + AT_rich Low_complexity Low_complexity 1 40 0 2 586 24 53 0 0 chr3L 145890 145928 -24397629 + AT_rich Low_complexity Low_complexity 1 38 0 2 586 268 180 0 63 chr3L 145978 146073 -24397484 + T-rich Low_complexity Low_complexity 5 93 0 2 586 21 0 0 0 chr3L 149217 149238 -24394319 + AT_rich Low_complexity Low_complexity 1 21 0 2 586 21 57 0 0 chr3L 152606 152641 -24390916 + AT_rich Low_complexity Low_complexity 1 35 0 2 586 25 0 0 0 chr3L 154638 154663 -24388894 + AT_rich Low_complexity Low_complexity 1 25 0 2 586 24 67 0 0 chr3L 158472 158517 -24385040 + AT_rich Low_complexity Low_complexity 1 45 0 2 586 35 24 0 0 chr3L 163969 164011 -24379546 + AT_rich Low_complexity Low_complexity 1 42 0 2 586 745 85 119 0 chr3L 164035 164153 -24379404 - DNAREP1_DM LINE Penelope -3 591 460 2 586 195 42 0 0 chr3L 178635 178659 -24364898 + (TCG)n Simple_repeat Simple_repeat 3 26 0 2 586 28 48 0 0 chr3L 187977 188019 -24355538 + AT_rich Low_complexity Low_complexity 1 42 0 2 586 25 31 0 0 chr3L 205957 205989 -24337568 + AT_rich Low_complexity Low_complexity 1 32 0 2 586 381 176 0 0 chr3L 207732 207806 -24335751 + (TA)n Simple_repeat Simple_repeat 1 74 0 2 586 34 0 0 0 chr3L 211526 211560 -24331997 + AT_rich Low_complexity Low_complexity 1 34 0 2 586 23 33 0 0 chr3L 220896 220926 -24322631 + AT_rich Low_complexity Low_complexity 1 30 0 2 586 302 216 2 110 chr3L 223448 223589 -24319968 - DNAREP1_DM LINE Penelope -259 335 117 2 586 262 236 0 0 chr3L 223634 223689 -24319868 - DNAREP1_DM LINE Penelope -538 56 2 2 586 254 337 0 0 chr3L 224628 224720 -24318837 + (CAA)n Simple_repeat Simple_repeat 2 93 0 2 586 24 0 0 0 chr3L 231696 231720 -24311837 + AT_rich Low_complexity Low_complexity 1 24 0 2 586 21 0 0 0 chr3L 231921 231942 -24311615 + AT_rich Low_complexity Low_complexity 1 21 0 2 586 27 73 0 0 chr3L 234134 234189 -24309368 + AT_rich Low_complexity Low_complexity 1 55 0 2 586 23 0 0 0 chr3L 234912 234935 -24308622 + AT_rich Low_complexity Low_complexity 1 23 0 2 586 23 0 0 0 chr3L 234941 234964 -24308593 + AT_rich Low_complexity Low_complexity 1 23 0 2 586 23 0 0 0 chr3L 236511 236534 -24307023 + AT_rich Low_complexity Low_complexity 1 23 0 2 586 25 51 0 0 chr3L 238575 238614 -24304943 + AT_rich Low_complexity Low_complexity 1 39 0 2 586 42 57 0 0 chr3L 247355 247425 -24296132 + AT_rich Low_complexity Low_complexity 1 70 0 2 586 22 70 0 0 chr3L 247640 247683 -24295874 + AT_rich Low_complexity Low_complexity 1 43 0 2 586 27 29 0 0 chr3L 250018 250052 -24293505 + AT_rich Low_complexity Low_complexity 1 34 0 2 586 24 53 0 0 chr3L 250241 250279 -24293278 + AT_rich Low_complexity Low_complexity 1 38 0 2 586 24 0 0 0 chr3L 254647 254671 -24288886 + AT_rich Low_complexity Low_complexity 1 24 0 2 586 21 0 0 0 chr3L 255914 255935 -24287622 + AT_rich Low_complexity Low_complexity 1 21 0 2 586 21 0 0 0 chr3L 259015 259036 -24284521 + AT_rich Low_complexity Low_complexity 1 21 0 2 587 24 53 0 0 chr3L 264542 264580 -24278977 + AT_rich Low_complexity Low_complexity 1 38 0 2 587 26 0 0 0 chr3L 273503 273529 -24270028 + AT_rich Low_complexity Low_complexity 1 26 0 2 587 258 105 0 0 chr3L 286864 286902 -24256655 + (CAG)n Simple_repeat Simple_repeat 3 40 0 2 587 195 100 0 0 chr3L 292836 292866 -24250691 + (CAAAC)n Simple_repeat Simple_repeat 4 33 0 2 587 258 248 23 11 chr3L 295153 295241 -24248316 - DNAREP1_DM LINE Penelope -105 489 446 2 587 247 173 173 0 chr3L 295289 295341 -24248216 - DNAREP1_DM LINE Penelope -532 62 2 2 587 195 42 0 0 chr3L 295355 295379 -24248178 + (CATCC)n Simple_repeat Simple_repeat 1 24 0 2 587 229 254 0 0 chr3L 296447 296502 -24247055 + DNAREP1_DM LINE Penelope 1 55 -539 2 587 26 30 0 0 chr3L 297560 297593 -24245964 + AT_rich Low_complexity Low_complexity 1 33 0 2 587 22 0 0 0 chr3L 305260 305282 -24238275 + AT_rich Low_complexity Low_complexity 1 22 0 2 587 215 323 0 0 chr3L 310318 310380 -24233177 + (CTG)n Simple_repeat Simple_repeat 1 62 0 2 587 22 0 0 0 chr3L 316790 316812 -24226745 + AT_rich Low_complexity Low_complexity 1 22 0 2 587 34 0 0 0 chr3L 317753 317787 -24225770 + AT_rich Low_complexity Low_complexity 1 34 0 2 587 22 0 0 0 chr3L 317927 317949 -24225608 + AT_rich Low_complexity Low_complexity 1 22 0 2 587 251 98 0 68 chr3L 320022 320066 -24223491 - DNAREP1_DM LINE Penelope -1 593 553 2 587 28 29 0 0 chr3L 328805 328840 -24214717 + AT_rich Low_complexity Low_complexity 1 35 0 2 587 21 57 0 0 chr3L 336708 336743 -24206814 + AT_rich Low_complexity Low_complexity 1 35 0 2 587 209 237 34 0 chr3L 340159 340218 -24203339 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 2 587 36 23 0 0 chr3L 343234 343277 -24200280 + AT_rich Low_complexity Low_complexity 1 43 0 2 587 21 0 0 0 chr3L 346353 346374 -24197183 + AT_rich Low_complexity Low_complexity 1 21 0 2 587 203 283 50 10 chr3L 346391 346491 -24197066 + (CATATA)n Simple_repeat Simple_repeat 2 105 0 2 587 224 229 28 14 chr3L 346398 346469 -24197088 + (TA)n Simple_repeat Simple_repeat 1 72 0 2 587 23 33 0 0 chr3L 346541 346571 -24196986 + AT_rich Low_complexity Low_complexity 1 30 0 2 587 23 33 0 0 chr3L 346637 346667 -24196890 + AT_rich Low_complexity Low_complexity 1 30 0 2 587 466 173 74 37 chr3L 357646 357754 -24185803 - DNAREP1_DM LINE Penelope -482 112 1 2 587 25 0 0 0 chr3L 366476 366501 -24177056 + AT_rich Low_complexity Low_complexity 1 25 0 2 587 237 65 0 0 chr3L 367504 367535 -24176022 + (TGG)n Simple_repeat Simple_repeat 1 31 0 2 587 223 231 0 0 chr3L 370985 371037 -24172520 + (CCG)n Simple_repeat Simple_repeat 3 54 0 2 587 198 0 0 0 chr3L 374978 375000 -24168557 + (TTCTG)n Simple_repeat Simple_repeat 4 25 0 2 587 216 67 0 0 chr3L 378225 378255 -24165302 + (GA)n Simple_repeat Simple_repeat 2 31 0 2 587 23 0 0 0 chr3L 387468 387491 -24156066 + AT_rich Low_complexity Low_complexity 1 23 0 2 587 201 74 0 0 chr3L 388124 388151 -24155406 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 587 225 0 0 0 chr3L 391980 392005 -24151552 + (T)n Simple_repeat Simple_repeat 1 25 0 2 587 245 143 0 35 chr3L 392679 392737 -24150820 + (TTGG)n Simple_repeat Simple_repeat 4 59 0 2 588 213 259 0 0 chr3L 393915 393973 -24149584 + (TCCG)n Simple_repeat Simple_repeat 3 60 0 2 588 22 56 0 0 chr3L 394544 394580 -24148977 + AT_rich Low_complexity Low_complexity 1 36 0 2 588 239 228 0 37 chr3L 402568 402650 -24140907 + ROO_I LTR Pao 651 729 -7527 2 588 3605 5 7 7 chr3L 402739 403153 -24140404 - DM297_LTR LTR Gypsy 0 414 1 2 588 54430 7 0 0 chr3L 403153 409321 -24134236 - DM297_I LTR Gypsy 0 6167 1 2 588 3605 5 7 7 chr3L 409321 409735 -24133822 - DM297_LTR LTR Gypsy 0 414 1 2 588 21 71 0 0 chr3L 410211 410253 -24133304 + AT_rich Low_complexity Low_complexity 1 42 0 2 588 281 283 22 0 chr3L 411684 411776 -24131781 + (TGGG)n Simple_repeat Simple_repeat 2 95 0 2 588 27 0 0 0 chr3L 413442 413469 -24130088 + AT_rich Low_complexity Low_complexity 1 27 0 2 588 28 29 0 0 chr3L 432166 432201 -24111356 + AT_rich Low_complexity Low_complexity 1 35 0 2 588 27 29 0 0 chr3L 441360 441394 -24102163 + AT_rich Low_complexity Low_complexity 1 34 0 2 588 32 0 0 0 chr3L 442649 442681 -24100876 + AT_rich Low_complexity Low_complexity 1 32 0 2 588 280 237 0 0 chr3L 451641 451717 -24091840 - ROO_I LTR Pao -7520 736 661 2 588 255 125 0 0 chr3L 458412 458452 -24085105 + (ACTCG)n Simple_repeat Simple_repeat 2 41 0 2 588 25 0 0 0 chr3L 458967 458992 -24084565 + AT_rich Low_complexity Low_complexity 1 25 0 2 588 22 0 0 0 chr3L 464833 464855 -24078702 + AT_rich Low_complexity Low_complexity 1 22 0 2 588 21 0 0 0 chr3L 464972 464993 -24078564 + AT_rich Low_complexity Low_complexity 1 21 0 2 588 225 0 0 0 chr3L 469980 470005 -24073552 + (TCC)n Simple_repeat Simple_repeat 2 26 0 2 588 241 26 26 26 chr3L 471536 471575 -24071982 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 588 180 0 0 0 chr3L 474266 474286 -24069271 + (T)n Simple_repeat Simple_repeat 1 20 0 2 588 30 27 0 0 chr3L 476337 476374 -24067183 + AT_rich Low_complexity Low_complexity 1 37 0 2 588 212 217 14 14 chr3L 479800 479870 -24063687 + T-rich Low_complexity Low_complexity 4 73 0 2 588 216 0 0 0 chr3L 480299 480323 -24063234 + (A)n Simple_repeat Simple_repeat 1 24 0 2 588 276 77 0 0 chr3L 484801 484840 -24058717 + (GGATG)n Simple_repeat Simple_repeat 5 43 0 2 588 23 33 0 0 chr3L 485557 485587 -24057970 + AT_rich Low_complexity Low_complexity 1 30 0 2 588 21 57 0 0 chr3L 491013 491048 -24052509 + AT_rich Low_complexity Low_complexity 1 35 0 2 588 245 109 22 0 chr3L 492678 492724 -24050833 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 588 200 179 0 51 chr3L 493570 493629 -24049928 + (CAG)n Simple_repeat Simple_repeat 3 58 0 2 588 24 0 0 0 chr3L 499009 499033 -24044524 + AT_rich Low_complexity Low_complexity 1 24 0 2 588 25 0 0 0 chr3L 507741 507766 -24035791 + AT_rich Low_complexity Low_complexity 1 25 0 2 588 218 204 0 0 chr3L 515875 515924 -24027633 + A-rich Low_complexity Low_complexity 1 49 0 2 588 216 0 0 0 chr3L 519698 519722 -24023835 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 588 23 0 0 0 chr3L 520582 520605 -24022952 + AT_rich Low_complexity Low_complexity 1 23 0 2 589 240 170 0 0 chr3L 527285 527338 -24016219 + (TGAA)n Simple_repeat Simple_repeat 2 54 0 2 589 23 0 0 0 chr3L 527653 527676 -24015881 + AT_rich Low_complexity Low_complexity 1 23 0 2 589 216 138 33 33 chr3L 531431 531491 -24012066 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 2 589 214 29 57 0 chr3L 544207 544242 -23999315 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 589 21 36 0 0 chr3L 544985 545013 -23998544 + AT_rich Low_complexity Low_complexity 1 28 0 2 589 241 208 32 156 chr3L 547940 548094 -23995463 + ROO_I LTR Pao 644 778 -7478 2 589 27 0 0 0 chr3L 549254 549281 -23994276 + AT_rich Low_complexity Low_complexity 1 27 0 2 589 183 100 0 0 chr3L 551122 551152 -23992405 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2 589 21 0 0 0 chr3L 556483 556504 -23987053 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 207 278 0 0 chr3L 565512 565566 -23977991 + (CAA)n Simple_repeat Simple_repeat 1 54 0 2 589 246 62 0 0 chr3L 565892 565924 -23977633 + (TTG)n Simple_repeat Simple_repeat 1 32 0 2 589 181 98 24 24 chr3L 568395 568437 -23975120 + (CATTT)n Simple_repeat Simple_repeat 4 45 0 2 589 231 213 0 16 chr3L 572473 572535 -23971022 + (CAG)n Simple_repeat Simple_repeat 3 63 0 2 589 271 262 12 12 chr3L 572586 572667 -23970890 + ROO_I LTR Pao 657 737 -7519 2 589 238 250 11 11 chr3L 573124 573213 -23970344 + (CAG)n Simple_repeat Simple_repeat 2 90 0 2 589 43 0 0 0 chr3L 574768 574811 -23968746 + AT_rich Low_complexity Low_complexity 1 43 0 2 589 183 80 0 0 chr3L 575207 575232 -23968325 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2 589 28 0 0 0 chr3L 576040 576068 -23967489 + AT_rich Low_complexity Low_complexity 1 28 0 2 589 24 96 0 0 chr3L 577271 577344 -23966213 + AT_rich Low_complexity Low_complexity 1 73 0 2 589 237 65 0 0 chr3L 579450 579481 -23964076 + (CACAC)n Simple_repeat Simple_repeat 3 33 0 2 589 242 186 0 33 chr3L 580265 580326 -23963231 + (CAAAC)n Simple_repeat Simple_repeat 2 60 0 2 589 201 149 29 15 chr3L 581161 581229 -23962328 + A-rich Low_complexity Low_complexity 3 71 0 2 589 183 129 0 0 chr3L 583015 583046 -23960511 + (CGAAT)n Simple_repeat Simple_repeat 4 34 0 2 589 24 32 0 0 chr3L 592781 592812 -23950745 + AT_rich Low_complexity Low_complexity 1 31 0 2 589 22 0 0 0 chr3L 592884 592906 -23950651 + AT_rich Low_complexity Low_complexity 1 22 0 2 589 292 22 44 0 chr3L 592990 593035 -23950522 + (TAA)n Simple_repeat Simple_repeat 1 47 0 2 589 34 0 0 0 chr3L 603194 603228 -23940329 + AT_rich Low_complexity Low_complexity 1 34 0 2 589 395 253 25 19 chr3L 604608 604769 -23938788 + SAR_DM Satellite Satellite 692 853 -619 2 589 21 0 0 0 chr3L 607290 607311 -23936246 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 198 0 0 0 chr3L 607654 607676 -23935881 + (A)n Simple_repeat Simple_repeat 1 22 0 2 589 25 0 0 0 chr3L 607975 608000 -23935557 + AT_rich Low_complexity Low_complexity 1 25 0 2 589 324 48 0 0 chr3L 608285 608327 -23935230 + (TTG)n Simple_repeat Simple_repeat 1 42 0 2 589 22 0 0 0 chr3L 608617 608639 -23934918 + AT_rich Low_complexity Low_complexity 1 22 0 2 589 23 68 0 0 chr3L 612024 612068 -23931489 + AT_rich Low_complexity Low_complexity 1 44 0 2 589 259 308 0 0 chr3L 614903 614981 -23928576 + (TCTG)n Simple_repeat Simple_repeat 1 78 0 2 589 249 245 0 0 chr3L 615102 615151 -23928406 + (CTG)n Simple_repeat Simple_repeat 2 50 0 2 589 183 42 0 0 chr3L 616504 616528 -23927029 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2 589 254 29 0 28 chr3L 617004 617040 -23926517 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2 589 22 35 0 0 chr3L 617321 617350 -23926207 + AT_rich Low_complexity Low_complexity 1 29 0 2 589 219 153 14 78 chr3L 618990 619132 -23924425 + (CAA)n Simple_repeat Simple_repeat 2 134 0 2 589 234 62 0 0 chr3L 619761 619793 -23923764 + (CCA)n Simple_repeat Simple_repeat 2 33 0 2 589 23 0 0 0 chr3L 621080 621103 -23922454 + GC_rich Low_complexity Low_complexity 1 23 0 2 589 203 250 0 0 chr3L 621903 621955 -23921602 + (TCG)n Simple_repeat Simple_repeat 1 52 0 2 589 330 98 0 0 chr3L 622961 623012 -23920545 + (ATTCG)n Simple_repeat Simple_repeat 1 51 0 2 589 245 231 0 0 chr3L 623489 623541 -23920016 + (CCG)n Simple_repeat Simple_repeat 1 52 0 2 589 180 0 0 0 chr3L 623901 623921 -23919636 + (TATAG)n Simple_repeat Simple_repeat 4 23 0 2 589 23 54 0 0 chr3L 628909 628946 -23914611 + AT_rich Low_complexity Low_complexity 1 37 0 2 589 203 161 0 0 chr3L 628961 628992 -23914565 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2 589 217 174 22 0 chr3L 629595 629641 -23913916 + (TTG)n Simple_repeat Simple_repeat 1 47 0 2 589 234 299 0 13 chr3L 633292 633370 -23910187 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 589 195 42 0 0 chr3L 633494 633518 -23910039 + (CAG)n Simple_repeat Simple_repeat 3 26 0 2 589 189 147 0 0 chr3L 635417 635451 -23908106 + (CGG)n Simple_repeat Simple_repeat 2 35 0 2 589 204 143 0 0 chr3L 637545 637587 -23905970 + (TTCGG)n Simple_repeat Simple_repeat 1 42 0 2 589 213 39 0 0 chr3L 639060 639086 -23904471 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 589 252 227 27 0 chr3L 639094 639169 -23904388 + A-rich Low_complexity Low_complexity 2 78 0 2 589 180 125 0 0 chr3L 639532 639564 -23903993 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 589 208 259 0 0 chr3L 641840 641894 -23901663 + A-rich Low_complexity Low_complexity 1 54 0 2 589 333 0 0 0 chr3L 643104 643141 -23900416 + (ACCG)n Simple_repeat Simple_repeat 3 39 0 2 589 21 0 0 0 chr3L 645096 645117 -23898440 + AT_rich Low_complexity Low_complexity 1 21 0 2 589 240 188 0 0 chr3L 646025 646089 -23897468 + (TTG)n Simple_repeat Simple_repeat 1 64 0 2 589 210 118 0 0 chr3L 647146 647180 -23896377 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 589 186 118 0 0 chr3L 653731 653765 -23889792 + (CTG)n Simple_repeat Simple_repeat 3 36 0 2 590 28 0 0 0 chr3L 655918 655946 -23887611 + AT_rich Low_complexity Low_complexity 1 28 0 2 590 21 0 0 0 chr3L 658487 658508 -23885049 + AT_rich Low_complexity Low_complexity 1 21 0 2 590 239 196 39 0 chr3L 658595 658646 -23884911 + (CCCCAA)n Simple_repeat Simple_repeat 1 53 0 2 590 22 0 0 0 chr3L 658806 658828 -23884729 + AT_rich Low_complexity Low_complexity 1 22 0 2 590 192 125 0 0 chr3L 659107 659139 -23884418 + (GGATG)n Simple_repeat Simple_repeat 4 35 0 2 590 233 224 0 15 chr3L 660180 660248 -23883309 + ROO_I LTR Pao 662 728 -7528 2 590 226 167 0 53 chr3L 661077 661153 -23882404 + (CTG)n Simple_repeat Simple_repeat 1 72 0 2 590 264 111 0 0 chr3L 662272 662317 -23881240 + (CAG)n Simple_repeat Simple_repeat 3 47 0 2 590 180 152 0 0 chr3L 663349 663382 -23880175 + (CAG)n Simple_repeat Simple_repeat 3 35 0 2 590 192 77 0 0 chr3L 663764 663790 -23879767 + (CAG)n Simple_repeat Simple_repeat 1 26 0 2 590 206 333 0 0 chr3L 664767 664827 -23878730 + (CTG)n Simple_repeat Simple_repeat 2 61 0 2 590 180 152 0 0 chr3L 667511 667544 -23876013 + (CCCGA)n Simple_repeat Simple_repeat 3 35 0 2 590 253 267 17 0 chr3L 668724 668784 -23874773 + (CCCCAA)n Simple_repeat Simple_repeat 3 63 0 2 590 228 35 0 0 chr3L 669514 669543 -23874014 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2 590 222 62 0 0 chr3L 671481 671513 -23872044 + (CGAAA)n Simple_repeat Simple_repeat 2 33 0 2 590 219 273 0 0 chr3L 672950 673005 -23870552 + (TTCGGG)n Simple_repeat Simple_repeat 2 56 0 2 590 26 30 0 0 chr3L 675043 675076 -23868481 + AT_rich Low_complexity Low_complexity 1 33 0 2 590 21 0 0 0 chr3L 675216 675237 -23868320 + AT_rich Low_complexity Low_complexity 1 21 0 2 590 22 0 0 0 chr3L 693114 693136 -23850421 + AT_rich Low_complexity Low_complexity 1 22 0 2 590 243 232 0 0 chr3L 693933 693989 -23849568 + (CTG)n Simple_repeat Simple_repeat 2 57 0 2 590 183 80 0 0 chr3L 694120 694145 -23849412 + (CTG)n Simple_repeat Simple_repeat 2 26 0 2 590 21 57 0 0 chr3L 696907 696942 -23846615 + AT_rich Low_complexity Low_complexity 1 35 0 2 590 291 232 0 35 chr3L 699808 699893 -23843664 + (CCCGAA)n Simple_repeat Simple_repeat 1 82 0 2 590 21 82 0 0 chr3L 701597 701646 -23841911 + AT_rich Low_complexity Low_complexity 1 49 0 2 590 23 0 0 0 chr3L 702918 702941 -23840616 + AT_rich Low_complexity Low_complexity 1 23 0 2 590 231 125 0 0 chr3L 703272 703312 -23840245 + (CAT)n Simple_repeat Simple_repeat 1 40 0 2 590 220 191 0 0 chr3L 706473 706515 -23837042 + (CAT)n Simple_repeat Simple_repeat 2 43 0 2 590 38 51 0 0 chr3L 710809 710868 -23832689 + AT_rich Low_complexity Low_complexity 1 59 0 2 590 23 33 0 0 chr3L 714726 714756 -23828801 + AT_rich Low_complexity Low_complexity 1 30 0 2 590 30 0 0 0 chr3L 717122 717152 -23826405 + AT_rich Low_complexity Low_complexity 1 30 0 2 590 257 219 46 15 chr3L 717371 717436 -23826121 + (CCCGAA)n Simple_repeat Simple_repeat 6 72 0 2 590 209 150 0 48 chr3L 719339 719381 -23824176 + (CAG)n Simple_repeat Simple_repeat 3 42 0 2 590 211 224 0 0 chr3L 722734 722783 -23820774 + A-rich Low_complexity Low_complexity 1 49 0 2 590 21 0 0 0 chr3L 723212 723233 -23820324 + AT_rich Low_complexity Low_complexity 1 21 0 2 590 204 97 0 0 chr3L 723758 723789 -23819768 + (TC)n Simple_repeat Simple_repeat 1 31 0 2 590 21 0 0 0 chr3L 724690 724711 -23818846 + AT_rich Low_complexity Low_complexity 1 21 0 2 590 24 32 0 0 chr3L 731677 731708 -23811849 + AT_rich Low_complexity Low_complexity 1 31 0 2 590 183 42 0 0 chr3L 732193 732217 -23811340 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2 590 180 0 0 0 chr3L 732600 732620 -23810937 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 590 225 0 0 0 chr3L 732718 732743 -23810814 + (A)n Simple_repeat Simple_repeat 1 25 0 2 590 200 135 27 0 chr3L 733568 733605 -23809952 + (CAT)n Simple_repeat Simple_repeat 2 39 0 2 590 290 212 0 0 chr3L 737943 738023 -23805534 - ROO_I LTR Pao -7534 722 643 2 590 211 233 0 0 chr3L 739573 739616 -23803941 + (TTG)n Simple_repeat Simple_repeat 2 44 0 2 590 25 0 0 0 chr3L 744881 744906 -23798651 + AT_rich Low_complexity Low_complexity 1 25 0 2 590 22 56 0 0 chr3L 746981 747017 -23796540 + AT_rich Low_complexity Low_complexity 1 36 0 2 590 311 178 0 27 chr3L 750142 750217 -23793340 + ROO_I LTR Pao 652 724 -7532 2 590 201 167 0 0 chr3L 750635 750671 -23792886 + T-rich Low_complexity Low_complexity 1 36 0 2 590 192 163 0 0 chr3L 750974 751017 -23792540 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 590 22 0 0 0 chr3L 752824 752846 -23790711 + AT_rich Low_complexity Low_complexity 1 22 0 2 590 21 0 0 0 chr3L 753228 753249 -23790308 + AT_rich Low_complexity Low_complexity 1 21 0 2 590 182 37 0 36 chr3L 756057 756085 -23787472 + (TTG)n Simple_repeat Simple_repeat 3 29 0 2 590 231 200 0 0 chr3L 757003 757053 -23786504 - DOC3_DM LINE Jockey -4179 561 512 2 590 189 0 0 0 chr3L 757295 757316 -23786241 + (CAG)n Simple_repeat Simple_repeat 3 23 0 2 590 207 69 0 0 chr3L 760156 760185 -23783372 + (CAGTC)n Simple_repeat Simple_repeat 4 32 0 2 590 195 42 0 0 chr3L 764988 765012 -23778545 + (GTATG)n Simple_repeat Simple_repeat 2 25 0 2 590 28 29 0 0 chr3L 766547 766582 -23776975 + AT_rich Low_complexity Low_complexity 1 35 0 2 590 27 0 0 0 chr3L 768098 768125 -23775432 + AT_rich Low_complexity Low_complexity 1 27 0 2 590 22 0 0 0 chr3L 769969 769991 -23773566 + AT_rich Low_complexity Low_complexity 1 22 0 2 590 24 0 0 0 chr3L 770030 770054 -23773503 + AT_rich Low_complexity Low_complexity 1 24 0 2 590 203 284 0 15 chr3L 773632 773700 -23769857 + (CAA)n Simple_repeat Simple_repeat 2 68 0 2 590 210 222 0 36 chr3L 774615 774671 -23768886 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 2 590 218 182 0 0 chr3L 777310 777354 -23766203 + (CAGT)n Simple_repeat Simple_repeat 3 46 0 2 590 256 130 74 0 chr3L 779533 779587 -23763970 - ROO_I LTR Pao -7512 744 687 2 590 21 0 0 0 chr3L 784003 784024 -23759533 + AT_rich Low_complexity Low_complexity 1 21 0 2 591 180 77 0 0 chr3L 786888 786914 -23756643 + (TCCG)n Simple_repeat Simple_repeat 1 26 0 2 591 29 28 0 0 chr3L 788377 788413 -23755144 + AT_rich Low_complexity Low_complexity 1 36 0 2 591 21 0 0 0 chr3L 789915 789936 -23753621 + AT_rich Low_complexity Low_complexity 1 21 0 2 591 4017 0 0 0 chr3L 789968 790396 -23753161 + ROO_LTR LTR Pao 1 428 0 2 591 216 216 0 19 chr3L 791037 791089 -23752468 + T-rich Low_complexity Low_complexity 2 52 0 2 591 236 264 0 40 chr3L 791273 791348 -23752209 + (TCG)n Simple_repeat Simple_repeat 2 73 0 2 591 327 105 0 0 chr3L 791760 791817 -23751740 + (CAGT)n Simple_repeat Simple_repeat 4 60 0 2 591 24 53 0 0 chr3L 793359 793397 -23750160 + AT_rich Low_complexity Low_complexity 1 38 0 2 591 22 0 0 0 chr3L 794620 794642 -23748915 + AT_rich Low_complexity Low_complexity 1 22 0 2 591 23 33 0 0 chr3L 794685 794715 -23748842 + AT_rich Low_complexity Low_complexity 1 30 0 2 591 25 31 0 0 chr3L 797130 797162 -23746395 + AT_rich Low_complexity Low_complexity 1 32 0 2 591 203 189 0 0 chr3L 801824 801861 -23741696 + A-rich Low_complexity Low_complexity 1 37 0 2 591 188 157 0 38 chr3L 807240 807293 -23736264 + (CAG)n Simple_repeat Simple_repeat 1 51 0 2 591 207 0 0 0 chr3L 812743 812766 -23730791 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 2 591 25 51 0 0 chr3L 815455 815494 -23728063 + AT_rich Low_complexity Low_complexity 1 39 0 2 591 21 82 0 0 chr3L 816380 816429 -23727128 + AT_rich Low_complexity Low_complexity 1 49 0 2 591 21 0 0 0 chr3L 816580 816601 -23726956 + AT_rich Low_complexity Low_complexity 1 21 0 2 591 21 0 0 0 chr3L 817395 817416 -23726141 + AT_rich Low_complexity Low_complexity 1 21 0 2 591 21 57 0 0 chr3L 820450 820485 -23723072 + AT_rich Low_complexity Low_complexity 1 35 0 2 591 267 190 0 0 chr3L 822234 822292 -23721265 + (TGAG)n Simple_repeat Simple_repeat 2 59 0 2 591 234 193 0 0 chr3L 824839 824896 -23718661 + (ATG)n Simple_repeat Simple_repeat 3 59 0 2 591 21 0 0 0 chr3L 825514 825535 -23718022 + AT_rich Low_complexity Low_complexity 1 21 0 2 591 24 0 0 0 chr3L 833482 833506 -23710051 + AT_rich Low_complexity Low_complexity 1 24 0 2 591 198 0 0 0 chr3L 836735 836757 -23706800 + (TAA)n Simple_repeat Simple_repeat 2 23 0 2 591 22 0 0 0 chr3L 841409 841431 -23702126 + AT_rich Low_complexity Low_complexity 1 22 0 2 591 29 28 0 0 chr3L 852642 852678 -23690879 + AT_rich Low_complexity Low_complexity 1 36 0 2 591 22 35 0 0 chr3L 854436 854465 -23689092 + AT_rich Low_complexity Low_complexity 1 29 0 2 591 3801 5 0 0 chr3L 858053 858470 -23685087 - TIRANT_LTR LTR Gypsy 0 417 1 2 591 67956 2 0 1 chr3L 858470 866060 -23677497 - TIRANT_I LTR Gypsy 0 7692 1 2 591 3801 5 0 0 chr3L 866060 866477 -23677080 - TIRANT_LTR LTR Gypsy 0 417 1 2 591 264 200 0 0 chr3L 869143 869203 -23674354 + (CCA)n Simple_repeat Simple_repeat 3 62 0 2 591 186 71 0 0 chr3L 869278 869306 -23674251 + (GGA)n Simple_repeat Simple_repeat 1 28 0 2 591 252 0 0 0 chr3L 870750 870778 -23672779 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 591 224 186 17 0 chr3L 872413 872472 -23671085 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 591 22 0 0 0 chr3L 873157 873179 -23670378 + AT_rich Low_complexity Low_complexity 1 22 0 2 591 218 184 0 0 chr3L 873544 873582 -23669975 + (CAA)n Simple_repeat Simple_repeat 1 38 0 2 591 204 40 0 0 chr3L 878241 878266 -23665291 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 591 217 213 0 0 chr3L 880718 880765 -23662792 + (TCG)n Simple_repeat Simple_repeat 2 48 0 2 591 207 62 39 59 chr3L 882559 882610 -23660947 + T-rich Low_complexity Low_complexity 1 50 0 2 591 235 267 0 65 chr3L 888335 888427 -23655130 + TART_B1 LINE telomeric 111 196 -10458 2 591 312 165 0 121 chr3L 888380 888504 -23655053 + ROO_I LTR Pao 636 744 -7512 2 591 237 277 12 12 chr3L 888562 888646 -23654911 + (CAG)n Simple_repeat Simple_repeat 1 84 0 2 591 207 114 0 0 chr3L 888693 888728 -23654829 + (CAG)n Simple_repeat Simple_repeat 3 37 0 2 591 232 227 13 13 chr3L 889036 889112 -23654445 + ROO_I LTR Pao 647 722 -7534 2 591 207 306 0 0 chr3L 889201 889263 -23654294 + (CAG)n Simple_repeat Simple_repeat 3 64 0 2 591 273 206 30 20 chr3L 889314 889413 -23654144 + (CAG)n Simple_repeat Simple_repeat 1 100 0 2 591 256 33 0 0 chr3L 893058 893088 -23650469 - POGO DNA Pogo -1156 965 936 2 591 208 184 20 0 chr3L 893942 893991 -23649566 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 591 27 0 0 0 chr3L 894402 894429 -23649128 + AT_rich Low_complexity Low_complexity 1 27 0 2 591 23 0 0 0 chr3L 905208 905231 -23638326 + AT_rich Low_complexity Low_complexity 1 23 0 2 591 23 33 0 0 chr3L 906105 906135 -23637422 + AT_rich Low_complexity Low_complexity 1 30 0 2 591 200 218 18 0 chr3L 908854 908909 -23634648 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 591 242 184 0 13 chr3L 915004 915081 -23628476 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 591 218 160 0 20 chr3L 915644 915695 -23627862 + (CTAAA)n Simple_repeat Simple_repeat 1 50 0 2 591 198 71 0 0 chr3L 916900 916928 -23626629 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 592 258 250 0 0 chr3L 919003 919071 -23624486 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 592 29 0 0 0 chr3L 923299 923328 -23620229 + AT_rich Low_complexity Low_complexity 1 29 0 2 592 423 100 0 0 chr3L 925246 925316 -23618241 + (TAA)n Simple_repeat Simple_repeat 3 72 0 2 592 3119 22 0 0 chr3L 925316 925672 -23617885 + MDG1_LTR LTR Gypsy 87 442 0 2 592 56911 7 19 1 chr3L 925672 932169 -23611388 + MDG1_I LTR Gypsy 1 6799 -98 2 592 423 100 0 0 chr3L 932173 932243 -23611314 + (TAA)n Simple_repeat Simple_repeat 3 72 0 2 592 3119 22 0 0 chr3L 932243 932599 -23610958 + MDG1_LTR LTR Gypsy 87 442 0 2 592 195 227 0 0 chr3L 934325 934391 -23609166 + (ACTG)n Simple_repeat Simple_repeat 1 66 0 2 592 180 0 0 0 chr3L 935170 935190 -23608367 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 592 180 0 0 0 chr3L 935635 935655 -23607902 + (CGA)n Simple_repeat Simple_repeat 2 21 0 2 592 228 200 0 0 chr3L 939319 939379 -23604178 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 592 9764 3 0 1 chr3L 939837 940886 -23602671 - LINEJ1_DM LINE Jockey -13 5007 3960 2 592 22 0 0 0 chr3L 946998 947020 -23596537 + AT_rich Low_complexity Low_complexity 1 22 0 2 592 443 112 12 0 chr3L 951608 951688 -23591869 + (CAGTT)n Simple_repeat Simple_repeat 4 84 0 2 592 228 103 17 33 chr3L 952776 952836 -23590721 + (TCTCTG)n Simple_repeat Simple_repeat 5 63 0 2 592 225 65 0 0 chr3L 953730 953761 -23589796 + (T)n Simple_repeat Simple_repeat 1 31 0 2 592 25 0 0 0 chr3L 955629 955654 -23587903 + AT_rich Low_complexity Low_complexity 1 25 0 2 592 189 74 0 0 chr3L 957404 957431 -23586126 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 592 230 241 0 0 chr3L 964312 964370 -23579187 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 592 189 0 0 0 chr3L 971003 971024 -23572533 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 592 189 107 0 0 chr3L 972965 972993 -23570564 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 2 592 204 167 0 0 chr3L 973046 973094 -23570463 + CT-rich Low_complexity Low_complexity 2 49 0 2 592 276 30 0 0 chr3L 976046 976079 -23567478 + (CAA)n Simple_repeat Simple_repeat 2 34 0 2 592 243 103 0 0 chr3L 976836 976875 -23566682 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 592 210 37 0 0 chr3L 977084 977111 -23566446 + (CAGT)n Simple_repeat Simple_repeat 4 30 0 2 592 25 31 0 0 chr3L 982509 982541 -23561016 + AT_rich Low_complexity Low_complexity 1 32 0 2 592 222 174 0 0 chr3L 986081 986127 -23557430 + (CCCGAA)n Simple_repeat Simple_repeat 6 51 0 2 592 198 0 0 0 chr3L 986691 986713 -23556844 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 592 183 162 0 0 chr3L 988228 988265 -23555292 + (CAAT)n Simple_repeat Simple_repeat 2 38 0 2 592 245 235 0 0 chr3L 988766 988834 -23554723 + (CAG)n Simple_repeat Simple_repeat 2 69 0 2 592 236 318 13 25 chr3L 988913 989071 -23554486 + (CCA)n Simple_repeat Simple_repeat 3 158 0 2 592 204 208 0 0 chr3L 1000656 1000704 -23542853 + (CCCA)n Simple_repeat Simple_repeat 2 49 0 2 592 342 45 0 0 chr3L 1001402 1001446 -23542111 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 592 228 149 0 0 chr3L 1001898 1001945 -23541612 + (CAGAA)n Simple_repeat Simple_repeat 3 49 0 2 592 186 43 0 0 chr3L 1007640 1007663 -23535894 + (TTG)n Simple_repeat Simple_repeat 1 23 0 2 592 188 61 61 0 chr3L 1009023 1009056 -23534501 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2 592 366 23 0 0 chr3L 1011241 1011284 -23532273 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 592 264 30 0 0 chr3L 1019309 1019342 -23524215 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 592 25 0 0 0 chr3L 1019932 1019957 -23523600 + AT_rich Low_complexity Low_complexity 1 25 0 2 592 189 74 0 0 chr3L 1021891 1021918 -23521639 + (TAAG)n Simple_repeat Simple_repeat 1 27 0 2 592 180 0 0 0 chr3L 1029861 1029881 -23513676 + (T)n Simple_repeat Simple_repeat 1 20 0 2 592 214 180 49 0 chr3L 1034069 1034130 -23509427 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 592 213 184 20 20 chr3L 1034574 1034624 -23508933 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 2 592 26 64 0 0 chr3L 1035067 1035114 -23508443 + AT_rich Low_complexity Low_complexity 1 47 0 2 592 24 53 0 0 chr3L 1037396 1037434 -23506123 + AT_rich Low_complexity Low_complexity 1 38 0 2 592 39 0 0 0 chr3L 1038163 1038202 -23505355 + AT_rich Low_complexity Low_complexity 1 39 0 2 592 259 152 18 45 chr3L 1038715 1038825 -23504732 + (CTG)n Simple_repeat Simple_repeat 1 107 0 2 592 21 57 0 0 chr3L 1039511 1039546 -23504011 + AT_rich Low_complexity Low_complexity 1 35 0 2 592 207 209 0 0 chr3L 1041642 1041685 -23501872 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 592 225 0 0 0 chr3L 1044864 1044889 -23498668 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 592 237 33 0 0 chr3L 1046456 1046486 -23497071 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 592 288 130 0 0 chr3L 1046611 1046657 -23496900 + (TTG)n Simple_repeat Simple_repeat 3 48 0 2 592 27 0 0 0 chr3L 1047288 1047315 -23496242 + AT_rich Low_complexity Low_complexity 1 27 0 2 9 59125 1 1 14 chr3L 1047406 1054568 -23488989 - DM412 LTR Gypsy 0 6897 1 2 593 5017 2 0 59 chr3L 1054554 1055161 -23488396 - DM412 LTR Gypsy 0 571 1 2 593 22 0 0 0 chr3L 1055266 1055288 -23488269 + AT_rich Low_complexity Low_complexity 1 22 0 2 593 218 204 0 0 chr3L 1055728 1055777 -23487780 + (CAA)n Simple_repeat Simple_repeat 2 50 0 2 593 23 0 0 0 chr3L 1055874 1055897 -23487660 + AT_rich Low_complexity Low_complexity 1 23 0 2 593 183 139 0 0 chr3L 1056975 1057011 -23486546 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 593 208 250 0 0 chr3L 1062436 1062488 -23481069 + A-rich Low_complexity Low_complexity 4 55 0 2 593 22 35 0 0 chr3L 1063764 1063793 -23479764 + AT_rich Low_complexity Low_complexity 1 29 0 2 593 21 36 0 0 chr3L 1064518 1064546 -23479011 + AT_rich Low_complexity Low_complexity 1 28 0 2 593 223 202 12 12 chr3L 1064713 1064793 -23478764 + (TTG)n Simple_repeat Simple_repeat 1 80 0 2 593 243 217 43 0 chr3L 1064892 1064961 -23478596 + (TGGG)n Simple_repeat Simple_repeat 2 73 0 2 593 218 122 24 0 chr3L 1068165 1068206 -23475351 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 593 186 167 0 0 chr3L 1068588 1068624 -23474933 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2 593 291 28 0 0 chr3L 1069110 1069146 -23474411 + (TTTTC)n Simple_repeat Simple_repeat 1 36 0 2 593 27 29 0 0 chr3L 1070252 1070286 -23473271 + AT_rich Low_complexity Low_complexity 1 34 0 2 593 213 182 0 0 chr3L 1070920 1070975 -23472582 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 593 25 0 0 0 chr3L 1072335 1072360 -23471197 + AT_rich Low_complexity Low_complexity 1 25 0 2 593 195 100 0 0 chr3L 1072371 1072401 -23471156 + (CGAAA)n Simple_repeat Simple_repeat 3 32 0 2 593 208 147 0 0 chr3L 1072573 1072607 -23470950 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 2 593 204 163 23 0 chr3L 1072963 1073006 -23470551 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 593 25 31 0 0 chr3L 1073200 1073232 -23470325 + AT_rich Low_complexity Low_complexity 1 32 0 2 593 25 51 0 0 chr3L 1073678 1073717 -23469840 + AT_rich Low_complexity Low_complexity 1 39 0 2 593 207 114 0 0 chr3L 1075251 1075286 -23468271 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 593 25 0 0 0 chr3L 1075663 1075688 -23467869 + AT_rich Low_complexity Low_complexity 1 25 0 2 593 24 67 0 0 chr3L 1076415 1076460 -23467097 + AT_rich Low_complexity Low_complexity 1 45 0 2 593 225 83 0 0 chr3L 1077020 1077056 -23466501 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 593 29 60 0 0 chr3L 1078493 1078543 -23465014 + AT_rich Low_complexity Low_complexity 1 50 0 2 593 216 67 0 0 chr3L 1080399 1080429 -23463128 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 593 225 196 0 19 chr3L 1080577 1080629 -23462928 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 593 180 0 0 0 chr3L 1082702 1082722 -23460835 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2 593 228 35 0 0 chr3L 1083121 1083150 -23460407 + (CATATA)n Simple_repeat Simple_repeat 4 32 0 2 593 232 70 47 0 chr3L 1083512 1083555 -23460002 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 593 245 250 0 12 chr3L 1083931 1084012 -23459545 + (TCTCTG)n Simple_repeat Simple_repeat 1 80 0 2 593 203 260 41 0 chr3L 1085759 1085832 -23457725 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 593 219 36 0 0 chr3L 1086216 1086244 -23457313 + (T)n Simple_repeat Simple_repeat 1 28 0 2 593 22 0 0 0 chr3L 1088302 1088324 -23455233 + AT_rich Low_complexity Low_complexity 1 22 0 2 593 210 37 0 0 chr3L 1088581 1088608 -23454949 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 593 23 0 0 0 chr3L 1089617 1089640 -23453917 + AT_rich Low_complexity Low_complexity 1 23 0 2 593 22 35 0 0 chr3L 1090180 1090209 -23453348 + AT_rich Low_complexity Low_complexity 1 29 0 2 593 183 232 0 0 chr3L 1090919 1090975 -23452582 + (CAA)n Simple_repeat Simple_repeat 3 58 0 2 593 198 0 0 0 chr3L 1091030 1091052 -23452505 + (TTTTTA)n Simple_repeat Simple_repeat 5 26 0 2 593 198 0 0 0 chr3L 1091062 1091084 -23452473 + (CTCA)n Simple_repeat Simple_repeat 3 24 0 2 593 181 57 57 0 chr3L 1094790 1094825 -23448732 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 593 24 0 0 0 chr3L 1094831 1094855 -23448702 + AT_rich Low_complexity Low_complexity 1 24 0 2 593 21 0 0 0 chr3L 1095001 1095022 -23448535 + AT_rich Low_complexity Low_complexity 1 21 0 2 593 21 57 0 0 chr3L 1095827 1095862 -23447695 + AT_rich Low_complexity Low_complexity 1 35 0 2 593 180 125 0 0 chr3L 1097605 1097637 -23445920 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 2 593 29 78 0 0 chr3L 1098180 1098244 -23445313 + AT_rich Low_complexity Low_complexity 1 64 0 2 593 189 74 0 0 chr3L 1098899 1098926 -23444631 + (TC)n Simple_repeat Simple_repeat 2 28 0 2 593 306 185 0 0 chr3L 1100803 1100884 -23442673 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 593 252 185 0 0 chr3L 1101273 1101327 -23442230 + (CAG)n Simple_repeat Simple_repeat 3 56 0 2 593 38 39 0 0 chr3L 1102108 1102160 -23441397 + AT_rich Low_complexity Low_complexity 1 52 0 2 593 216 67 0 0 chr3L 1104794 1104824 -23438733 + (CGTTG)n Simple_repeat Simple_repeat 5 34 0 2 593 205 88 29 0 chr3L 1108735 1108769 -23434788 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 593 222 246 33 0 chr3L 1108913 1108974 -23434583 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 593 212 143 0 0 chr3L 1112121 1112156 -23431401 + (CTG)n Simple_repeat Simple_repeat 3 37 0 2 593 207 69 0 0 chr3L 1113169 1113198 -23430359 + (CGAAT)n Simple_repeat Simple_repeat 1 29 0 2 593 219 80 0 91 chr3L 1114212 1114267 -23429290 + (CCCA)n Simple_repeat Simple_repeat 2 51 0 2 593 214 278 14 14 chr3L 1116902 1116975 -23426582 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 593 22 56 0 0 chr3L 1118531 1118567 -23424990 + AT_rich Low_complexity Low_complexity 1 36 0 2 593 219 114 0 0 chr3L 1119248 1119283 -23424274 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2 593 27 29 0 0 chr3L 1119800 1119834 -23423723 + AT_rich Low_complexity Low_complexity 1 34 0 2 593 21 0 0 0 chr3L 1121912 1121933 -23421624 + AT_rich Low_complexity Low_complexity 1 21 0 2 593 228 143 0 0 chr3L 1122170 1122212 -23421345 + (CAACT)n Simple_repeat Simple_repeat 5 46 0 2 593 22 0 0 0 chr3L 1122342 1122364 -23421193 + AT_rich Low_complexity Low_complexity 1 22 0 2 593 180 200 0 0 chr3L 1123881 1123926 -23419631 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 593 21 0 0 0 chr3L 1124400 1124421 -23419136 + AT_rich Low_complexity Low_complexity 1 21 0 2 593 245 161 54 0 chr3L 1126595 1126651 -23416906 + (CCGAA)n Simple_repeat Simple_repeat 2 60 0 2 593 26 0 0 0 chr3L 1130342 1130368 -23413189 + AT_rich Low_complexity Low_complexity 1 26 0 2 593 192 179 0 0 chr3L 1132732 1132771 -23410786 + A-rich Low_complexity Low_complexity 2 40 0 2 593 191 85 16 63 chr3L 1134130 1134193 -23409364 + (TTA)n Simple_repeat Simple_repeat 3 62 0 2 593 22 35 0 0 chr3L 1136886 1136915 -23406642 + AT_rich Low_complexity Low_complexity 1 29 0 2 593 216 97 0 0 chr3L 1137998 1138029 -23405528 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 593 269 250 0 0 chr3L 1138187 1138267 -23405290 + (CA)n Simple_repeat Simple_repeat 1 80 0 2 593 180 97 0 0 chr3L 1139013 1139044 -23404513 + (GGAAA)n Simple_repeat Simple_repeat 2 32 0 2 593 255 61 0 0 chr3L 1140097 1140130 -23403427 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 593 234 105 0 0 chr3L 1140539 1140577 -23402980 + (TAA)n Simple_repeat Simple_repeat 1 38 0 2 593 225 211 0 0 chr3L 1140968 1141020 -23402537 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 593 209 196 0 42 chr3L 1142573 1142621 -23400936 + (CTG)n Simple_repeat Simple_repeat 3 48 0 2 593 213 108 0 0 chr3L 1142738 1142775 -23400782 + (CTG)n Simple_repeat Simple_repeat 3 39 0 2 593 204 263 18 0 chr3L 1144719 1144776 -23398781 + (CTAG)n Simple_repeat Simple_repeat 2 59 0 2 593 189 0 0 0 chr3L 1145716 1145737 -23397820 + (CTG)n Simple_repeat Simple_repeat 2 22 0 2 593 258 125 0 0 chr3L 1145735 1145783 -23397774 + (TTC)n Simple_repeat Simple_repeat 2 49 0 2 593 218 184 20 20 chr3L 1145964 1146014 -23397543 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 593 180 0 0 0 chr3L 1147502 1147522 -23396035 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 593 21 36 0 0 chr3L 1147837 1147865 -23395692 + AT_rich Low_complexity Low_complexity 1 28 0 2 593 282 216 27 13 chr3L 1147923 1147998 -23395559 + (CAG)n Simple_repeat Simple_repeat 3 78 0 2 593 207 0 0 0 chr3L 1148339 1148362 -23395195 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 593 368 20 20 0 chr3L 1149847 1149896 -23393661 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 593 208 320 0 0 chr3L 1150502 1150602 -23392955 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 2 593 189 0 0 0 chr3L 1150751 1150772 -23392785 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 593 21 57 0 0 chr3L 1151355 1151390 -23392167 + AT_rich Low_complexity Low_complexity 1 35 0 2 593 34 24 0 0 chr3L 1151882 1151923 -23391634 + AT_rich Low_complexity Low_complexity 1 41 0 2 593 25 0 0 0 chr3L 1152097 1152122 -23391435 + AT_rich Low_complexity Low_complexity 1 25 0 2 593 27 29 0 0 chr3L 1153136 1153170 -23390387 + AT_rich Low_complexity Low_complexity 1 34 0 2 593 222 62 0 0 chr3L 1153306 1153338 -23390219 + (TGGA)n Simple_repeat Simple_repeat 4 35 0 2 593 243 125 0 0 chr3L 1153863 1153903 -23389654 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2 593 3964 2 0 2 chr3L 1154184 1154613 -23388944 + ROO_LTR LTR Pao 1 428 0 2 593 74343 1 4 2 chr3L 1154613 1162848 -23380709 + ROO_I LTR Pao 1 8256 0 2 593 3964 2 0 2 chr3L 1162848 1163277 -23380280 + ROO_LTR LTR Pao 1 428 0 2 593 23 0 0 0 chr3L 1163288 1163311 -23380246 + AT_rich Low_complexity Low_complexity 1 23 0 2 593 21 0 0 0 chr3L 1163883 1163904 -23379653 + AT_rich Low_complexity Low_complexity 1 21 0 2 593 22 35 0 0 chr3L 1163984 1164013 -23379544 + AT_rich Low_complexity Low_complexity 1 29 0 2 593 203 179 0 0 chr3L 1165147 1165186 -23378371 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 2 593 198 103 0 0 chr3L 1166180 1166209 -23377348 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2 593 22 0 0 0 chr3L 1168616 1168638 -23374919 + AT_rich Low_complexity Low_complexity 1 22 0 2 593 270 164 0 0 chr3L 1168768 1168823 -23374734 + (CAT)n Simple_repeat Simple_repeat 2 56 0 2 593 186 103 0 0 chr3L 1169616 1169645 -23373912 + (A)n Simple_repeat Simple_repeat 1 29 0 2 593 299 136 17 0 chr3L 1175183 1175242 -23368315 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 593 30 0 0 0 chr3L 1175344 1175374 -23368183 + AT_rich Low_complexity Low_complexity 1 30 0 2 593 34 24 0 0 chr3L 1175403 1175444 -23368113 + AT_rich Low_complexity Low_complexity 1 41 0 2 593 234 206 0 16 chr3L 1175526 1175590 -23367967 + (TTA)n Simple_repeat Simple_repeat 2 64 0 2 593 209 57 29 0 chr3L 1176341 1176376 -23367181 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2 593 269 217 12 0 chr3L 1177129 1177212 -23366345 + (TTG)n Simple_repeat Simple_repeat 1 84 0 2 593 226 200 0 52 chr3L 1177970 1178028 -23365529 + (CAG)n Simple_repeat Simple_repeat 2 56 0 2 593 213 65 0 0 chr3L 1178822 1178853 -23364704 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 593 358 162 54 0 chr3L 1179299 1179373 -23364184 + LINEJ1_DM LINE Jockey 4930 5007 -13 2 593 24 0 0 0 chr3L 1179428 1179452 -23364105 + AT_rich Low_complexity Low_complexity 1 24 0 2 594 207 0 0 0 chr3L 1183257 1183280 -23360277 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 594 311 301 11 0 chr3L 1186753 1186846 -23356711 + (CCCCAG)n Simple_repeat Simple_repeat 5 98 0 2 594 249 33 0 0 chr3L 1187895 1187925 -23355632 + (GCTG)n Simple_repeat Simple_repeat 2 31 0 2 594 642 47 0 0 chr3L 1195736 1195822 -23347735 + (TATAA)n Simple_repeat Simple_repeat 1 86 0 2 594 27 87 0 0 chr3L 1195856 1195925 -23347632 + AT_rich Low_complexity Low_complexity 1 69 0 2 594 186 103 0 0 chr3L 1196223 1196252 -23347305 + (GA)n Simple_repeat Simple_repeat 1 29 0 2 594 27 49 0 0 chr3L 1200480 1200521 -23343036 + AT_rich Low_complexity Low_complexity 1 41 0 2 594 200 276 0 0 chr3L 1200994 1201052 -23342505 + (CAA)n Simple_repeat Simple_repeat 3 60 0 2 594 5158 7 2 2 chr3L 1219646 1220216 -23323341 + DM412 LTR Gypsy 2 571 0 2 594 49550 1 1 4 chr3L 1220202 1227326 -23316231 + DM412 LTR Gypsy 1 6897 0 2 594 23 54 0 0 chr3L 1245978 1246015 -23297542 + AT_rich Low_complexity Low_complexity 1 37 0 2 594 23 54 0 0 chr3L 1246971 1247008 -23296549 + AT_rich Low_complexity Low_complexity 1 37 0 2 594 36 0 0 0 chr3L 1251816 1251852 -23291705 + AT_rich Low_complexity Low_complexity 1 36 0 2 594 238 286 0 0 chr3L 1255676 1255746 -23287811 + GA-rich Low_complexity Low_complexity 2 71 0 2 594 21 36 0 0 chr3L 1258015 1258043 -23285514 + AT_rich Low_complexity Low_complexity 1 28 0 2 594 32 75 0 0 chr3L 1258693 1258760 -23284797 + AT_rich Low_complexity Low_complexity 1 67 0 2 594 23 0 0 0 chr3L 1260688 1260711 -23282846 + AT_rich Low_complexity Low_complexity 1 23 0 2 594 180 77 0 0 chr3L 1261851 1261877 -23281680 + (GGA)n Simple_repeat Simple_repeat 1 26 0 2 594 282 87 0 0 chr3L 1262982 1263028 -23280529 + (CGAAT)n Simple_repeat Simple_repeat 1 46 0 2 594 21 0 0 0 chr3L 1265089 1265110 -23278447 + AT_rich Low_complexity Low_complexity 1 21 0 2 594 228 35 0 0 chr3L 1265661 1265690 -23277867 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 594 26 30 0 0 chr3L 1268898 1268931 -23274626 + AT_rich Low_complexity Low_complexity 1 33 0 2 594 29 0 0 0 chr3L 1270401 1270430 -23273127 + AT_rich Low_complexity Low_complexity 1 29 0 2 594 24 53 0 0 chr3L 1270813 1270851 -23272706 + AT_rich Low_complexity Low_complexity 1 38 0 2 594 216 196 0 0 chr3L 1272899 1272945 -23270612 + (CAATT)n Simple_repeat Simple_repeat 4 49 0 2 594 26 30 0 0 chr3L 1275496 1275529 -23268028 + AT_rich Low_complexity Low_complexity 1 33 0 2 594 267 161 0 0 chr3L 1277773 1277829 -23265728 + (AACTG)n Simple_repeat Simple_repeat 5 60 0 2 594 21 0 0 0 chr3L 1280595 1280616 -23262941 + AT_rich Low_complexity Low_complexity 1 21 0 2 594 252 0 0 0 chr3L 1282896 1282924 -23260633 + (ACTG)n Simple_repeat Simple_repeat 2 29 0 2 594 213 217 0 0 chr3L 1283127 1283173 -23260384 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 594 26 64 0 0 chr3L 1294380 1294427 -23249130 + AT_rich Low_complexity Low_complexity 1 47 0 2 594 21 0 0 0 chr3L 1300388 1300409 -23243148 + AT_rich Low_complexity Low_complexity 1 21 0 2 594 215 31 31 0 chr3L 1301332 1301364 -23242193 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2 594 189 0 0 0 chr3L 1301578 1301599 -23241958 + (GGTTG)n Simple_repeat Simple_repeat 4 24 0 2 594 198 103 0 0 chr3L 1307190 1307219 -23236338 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 2 595 26 74 0 0 chr3L 1332260 1332314 -23211243 + AT_rich Low_complexity Low_complexity 1 54 0 2 595 186 171 0 0 chr3L 1335534 1335575 -23207982 + GA-rich Low_complexity Low_complexity 1 41 0 2 595 23 0 0 0 chr3L 1350909 1350932 -23192625 + AT_rich Low_complexity Low_complexity 1 23 0 2 595 238 134 15 15 chr3L 1350966 1351034 -23192523 + A-rich Low_complexity Low_complexity 3 70 0 2 595 22 0 0 0 chr3L 1354292 1354314 -23189243 + AT_rich Low_complexity Low_complexity 1 22 0 2 595 254 250 23 0 chr3L 1357005 1357093 -23186464 + (TCCA)n Simple_repeat Simple_repeat 3 92 0 2 595 234 0 0 0 chr3L 1359360 1359386 -23184171 + (TCC)n Simple_repeat Simple_repeat 3 28 0 2 595 191 114 0 28 chr3L 1362236 1362272 -23181285 + (ATTTG)n Simple_repeat Simple_repeat 2 36 0 2 595 270 56 0 0 chr3L 1362308 1362344 -23181213 + (CTG)n Simple_repeat Simple_repeat 1 36 0 2 595 283 273 16 65 chr3L 1368617 1368801 -23174756 + T-rich Low_complexity Low_complexity 6 180 0 2 595 203 262 0 0 chr3L 1372237 1372298 -23171259 + A-rich Low_complexity Low_complexity 1 61 0 2 595 21 0 0 0 chr3L 1373891 1373912 -23169645 + AT_rich Low_complexity Low_complexity 1 21 0 2 595 213 65 0 0 chr3L 1375838 1375869 -23167688 + (TAGA)n Simple_repeat Simple_repeat 3 33 0 2 595 240 86 0 0 chr3L 1377243 1377278 -23166279 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 2 595 205 156 0 0 chr3L 1393605 1393637 -23149920 + (CAGAC)n Simple_repeat Simple_repeat 4 35 0 2 595 240 86 0 0 chr3L 1394617 1394652 -23148905 + (CAGT)n Simple_repeat Simple_repeat 1 35 0 2 595 198 103 0 0 chr3L 1395816 1395845 -23147712 + (TCCG)n Simple_repeat Simple_repeat 4 32 0 2 595 322 39 39 19 chr3L 1396780 1396832 -23146725 + (CTATT)n Simple_repeat Simple_repeat 2 54 0 2 595 21 0 0 0 chr3L 1397265 1397286 -23146271 + AT_rich Low_complexity Low_complexity 1 21 0 2 595 234 62 0 0 chr3L 1403553 1403585 -23139972 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 595 267 31 0 0 chr3L 1407531 1407563 -23135994 + (CAT)n Simple_repeat Simple_repeat 1 32 0 2 595 246 222 0 18 chr3L 1407628 1407683 -23135874 + (TTG)n Simple_repeat Simple_repeat 1 54 0 2 595 198 0 0 0 chr3L 1407918 1407940 -23135617 + (CAT)n Simple_repeat Simple_repeat 2 23 0 2 595 225 65 0 0 chr3L 1414475 1414506 -23129051 + (CGAAT)n Simple_repeat Simple_repeat 5 35 0 2 595 21 0 0 0 chr3L 1421215 1421236 -23122321 + AT_rich Low_complexity Low_complexity 1 21 0 2 595 236 148 37 0 chr3L 1424460 1424514 -23119043 + (CACCAT)n Simple_repeat Simple_repeat 6 61 0 2 595 216 67 0 0 chr3L 1424794 1424824 -23118733 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 595 48175 3 0 0 chr3L 1424831 1430008 -23113549 + DMRT1A LINE R1 7 5183 0 2 595 189 0 0 0 chr3L 1431594 1431615 -23111942 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 595 249 98 0 0 chr3L 1440118 1440159 -23103398 + (GGA)n Simple_repeat Simple_repeat 1 41 0 2 595 216 0 0 0 chr3L 1440860 1440884 -23102673 + (CAGC)n Simple_repeat Simple_repeat 3 26 0 2 595 180 125 0 0 chr3L 1441149 1441181 -23102376 + (T)n Simple_repeat Simple_repeat 1 32 0 2 596 294 29 0 0 chr3L 1442438 1442473 -23101084 + (ACTG)n Simple_repeat Simple_repeat 1 35 0 2 596 198 0 0 0 chr3L 1446044 1446066 -23097491 + (ATG)n Simple_repeat Simple_repeat 1 22 0 2 596 210 128 0 0 chr3L 1447316 1447355 -23096202 + (TTGG)n Simple_repeat Simple_repeat 3 41 0 2 596 183 28 0 77 chr3L 1449452 1449491 -23094066 + (CATA)n Simple_repeat Simple_repeat 4 39 0 2 596 40 0 0 0 chr3L 1450117 1450157 -23093400 + AT_rich Low_complexity Low_complexity 1 40 0 2 596 240 149 0 0 chr3L 1451622 1451669 -23091888 + (CAATC)n Simple_repeat Simple_repeat 1 47 0 2 596 207 0 0 0 chr3L 1451908 1451931 -23091626 + (A)n Simple_repeat Simple_repeat 1 23 0 2 596 206 218 0 0 chr3L 1452826 1452881 -23090676 + (CAG)n Simple_repeat Simple_repeat 1 55 0 2 596 21 0 0 0 chr3L 1454079 1454100 -23089457 + AT_rich Low_complexity Low_complexity 1 21 0 2 596 222 91 0 0 chr3L 1461187 1461220 -23082337 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 2 596 24 32 0 0 chr3L 1464576 1464607 -23078950 + AT_rich Low_complexity Low_complexity 1 31 0 2 596 21 36 0 0 chr3L 1464825 1464853 -23078704 + AT_rich Low_complexity Low_complexity 1 28 0 2 596 213 94 0 0 chr3L 1468031 1468063 -23075494 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 596 180 152 0 0 chr3L 1468115 1468148 -23075409 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 2 596 216 0 0 0 chr3L 1468188 1468212 -23075345 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 596 204 67 0 0 chr3L 1468284 1468314 -23075243 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 2 596 261 83 0 0 chr3L 1468622 1468658 -23074899 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 596 194 83 56 0 chr3L 1468824 1468860 -23074697 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 2 596 330 45 0 0 chr3L 1470008 1470052 -23073505 + (CAATC)n Simple_repeat Simple_repeat 3 46 0 2 596 240 35 0 0 chr3L 1472780 1472809 -23070748 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 596 21 0 0 0 chr3L 1475427 1475448 -23068109 + AT_rich Low_complexity Low_complexity 1 21 0 2 596 21 0 0 0 chr3L 1475607 1475628 -23067929 + AT_rich Low_complexity Low_complexity 1 21 0 2 596 189 0 0 0 chr3L 1481959 1481980 -23061577 + (A)n Simple_repeat Simple_repeat 1 21 0 2 596 219 88 0 0 chr3L 1485581 1485615 -23057942 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 596 9374 27 0 2 chr3L 1485764 1486871 -23056686 + PROTOP_A DNA P 1 1105 0 2 596 618 15 0 0 chr3L 1490338 1490406 -23053151 + PROTOP_A DNA P 1 68 -1037 2 596 5094 15 3 7 chr3L 1490405 1491012 -23052545 + PROTOP_A DNA P 501 1105 0 2 596 201 143 94 16 chr3L 1499410 1499474 -23044083 + (ATTTG)n Simple_repeat Simple_repeat 2 70 0 2 596 192 49 47 47 chr3L 1500875 1500918 -23042639 + (TAG)n Simple_repeat Simple_repeat 1 43 0 2 596 242 0 61 0 chr3L 1501474 1501507 -23042050 + (AGTAG)n Simple_repeat Simple_repeat 1 35 0 2 596 4554 6 0 0 chr3L 1506055 1506562 -23036995 + DM176_LTR LTR Gypsy 1 507 0 2 596 56443 1 0 16 chr3L 1506562 1513083 -23030474 + DM176_I LTR Gypsy 1 6420 0 2 596 4554 6 0 0 chr3L 1513083 1513590 -23029967 + DM176_LTR LTR Gypsy 1 507 0 2 596 29 47 0 0 chr3L 1515348 1515391 -23028166 + AT_rich Low_complexity Low_complexity 1 43 0 2 596 26 30 0 0 chr3L 1534207 1534240 -23009317 + AT_rich Low_complexity Low_complexity 1 33 0 2 596 22 35 0 0 chr3L 1534484 1534513 -23009044 + AT_rich Low_complexity Low_complexity 1 29 0 2 596 25 31 0 0 chr3L 1538359 1538391 -23005166 + AT_rich Low_complexity Low_complexity 1 32 0 2 596 29 28 0 0 chr3L 1545882 1545918 -22997639 + AT_rich Low_complexity Low_complexity 1 36 0 2 596 22 0 0 0 chr3L 1553022 1553044 -22990513 + AT_rich Low_complexity Low_complexity 1 22 0 2 596 248 200 16 62 chr3L 1556370 1556434 -22987123 - R2_DM LINE R2 -504 3103 3043 2 596 22 70 0 0 chr3L 1558592 1558635 -22984922 + AT_rich Low_complexity Low_complexity 1 43 0 2 596 25 31 0 0 chr3L 1567642 1567674 -22975883 + AT_rich Low_complexity Low_complexity 1 32 0 2 597 25 83 0 0 chr3L 1576444 1576504 -22967053 + AT_rich Low_complexity Low_complexity 1 60 0 2 597 208 143 52 35 chr3L 1579548 1579606 -22963951 + (TTTG)n Simple_repeat Simple_repeat 1 59 0 2 597 317 24 0 23 chr3L 1579650 1579693 -22963864 + (CATA)n Simple_repeat Simple_repeat 3 44 0 2 597 247 204 0 0 chr3L 1582232 1582286 -22961271 + A-rich Low_complexity Low_complexity 1 54 0 2 597 22 0 0 0 chr3L 1584425 1584447 -22959110 + AT_rich Low_complexity Low_complexity 1 22 0 2 597 31 0 0 0 chr3L 1585958 1585989 -22957568 + AT_rich Low_complexity Low_complexity 1 31 0 2 597 28 0 0 0 chr3L 1589145 1589173 -22954384 + AT_rich Low_complexity Low_complexity 1 28 0 2 597 31 0 0 0 chr3L 1589587 1589618 -22953939 + AT_rich Low_complexity Low_complexity 1 31 0 2 597 25 31 0 0 chr3L 1591495 1591527 -22952030 + AT_rich Low_complexity Low_complexity 1 32 0 2 597 203 156 0 0 chr3L 1593783 1593815 -22949742 + (CAG)n Simple_repeat Simple_repeat 2 33 0 2 597 201 129 0 0 chr3L 1599421 1599452 -22944105 + (CAG)n Simple_repeat Simple_repeat 2 32 0 2 597 198 0 0 0 chr3L 1600186 1600208 -22943349 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 2 597 222 128 0 60 chr3L 1600310 1600360 -22943197 + A-rich Low_complexity Low_complexity 2 48 0 2 597 31 0 0 0 chr3L 1600711 1600742 -22942815 + AT_rich Low_complexity Low_complexity 1 31 0 2 597 36 0 0 0 chr3L 1605092 1605128 -22938429 + AT_rich Low_complexity Low_complexity 1 36 0 2 597 183 42 0 0 chr3L 1609507 1609531 -22934026 + (A)n Simple_repeat Simple_repeat 1 24 0 2 597 237 200 0 0 chr3L 1614260 1614300 -22929257 + (TTCGGG)n Simple_repeat Simple_repeat 5 44 0 2 597 189 74 0 0 chr3L 1614421 1614448 -22929109 + (CTG)n Simple_repeat Simple_repeat 3 29 0 2 597 23 33 0 0 chr3L 1618311 1618341 -22925216 + AT_rich Low_complexity Low_complexity 1 30 0 2 597 22 0 0 0 chr3L 1620362 1620384 -22923173 + AT_rich Low_complexity Low_complexity 1 22 0 2 597 202 154 0 25 chr3L 1620731 1620771 -22922786 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 2 597 207 191 24 0 chr3L 1620825 1620867 -22922690 + (CAG)n Simple_repeat Simple_repeat 1 43 0 2 597 273 29 0 0 chr3L 1626555 1626589 -22916968 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 597 201 143 0 0 chr3L 1627025 1627060 -22916497 + (TCC)n Simple_repeat Simple_repeat 2 36 0 2 597 300 111 0 0 chr3L 1627956 1628001 -22915556 + (TTGG)n Simple_repeat Simple_repeat 3 47 0 2 597 220 195 0 24 chr3L 1628130 1628172 -22915385 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 597 235 113 19 19 chr3L 1628232 1628286 -22915271 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 597 27 0 0 0 chr3L 1630348 1630375 -22913182 + AT_rich Low_complexity Low_complexity 1 27 0 2 597 24 0 0 0 chr3L 1631946 1631970 -22911587 + AT_rich Low_complexity Low_complexity 1 24 0 2 597 246 105 0 0 chr3L 1632668 1632706 -22910851 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 597 279 0 0 0 chr3L 1633185 1633216 -22910341 + (TTGG)n Simple_repeat Simple_repeat 1 31 0 2 597 186 128 0 0 chr3L 1633360 1633399 -22910158 + (TTG)n Simple_repeat Simple_repeat 3 41 0 2 597 195 42 0 0 chr3L 1635085 1635109 -22908448 + (GTGTG)n Simple_repeat Simple_repeat 5 28 0 2 597 204 150 0 24 chr3L 1636984 1637025 -22906532 + (TGG)n Simple_repeat Simple_repeat 2 41 0 2 597 249 98 0 0 chr3L 1637081 1637122 -22906435 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 597 206 163 0 23 chr3L 1661102 1661146 -22882411 + CT-rich Low_complexity Low_complexity 2 44 0 2 597 27 62 0 0 chr3L 1662665 1662713 -22880844 + AT_rich Low_complexity Low_complexity 1 48 0 2 597 258 105 0 0 chr3L 1673618 1673656 -22869901 + (CGA)n Simple_repeat Simple_repeat 2 39 0 2 597 27 0 0 0 chr3L 1674089 1674116 -22869441 + AT_rich Low_complexity Low_complexity 1 27 0 2 597 210 71 0 0 chr3L 1678051 1678079 -22865478 + (CAGCT)n Simple_repeat Simple_repeat 3 30 0 2 597 24 67 0 0 chr3L 1680568 1680613 -22862944 + AT_rich Low_complexity Low_complexity 1 45 0 2 597 253 253 58 0 chr3L 1680647 1680734 -22862823 + XDMR_DM Unknown Unknown 8 99 -261 2 597 426 302 30 33 chr3L 1680769 1681070 -22862487 - SAR_DM Satellite Satellite -595 877 578 2 597 334 296 42 38 chr3L 1682280 1682299 -22861258 - SAR_DM Satellite Satellite -595 877 831 2 597 410 174 37 43 chr3L 1682299 1682461 -22861096 + XDMR_DM Unknown Unknown 188 348 -12 2 597 334 296 42 38 chr3L 1682461 1682543 -22861014 - SAR_DM Satellite Satellite -595 830 614 2 597 207 188 0 0 chr3L 1686972 1687020 -22856537 + (CATTT)n Simple_repeat Simple_repeat 4 51 0 2 597 203 240 40 0 chr3L 1687748 1687798 -22855759 + (TATG)n Simple_repeat Simple_repeat 3 54 0 2 597 215 209 0 0 chr3L 1688638 1688681 -22854876 + (CTG)n Simple_repeat Simple_repeat 2 44 0 2 597 230 196 0 18 chr3L 1689376 1689433 -22854124 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 597 192 135 0 0 chr3L 1695784 1695821 -22847736 + (CAG)n Simple_repeat Simple_repeat 1 37 0 2 597 557 265 75 35 chr3L 1700570 1700852 -22842705 - SAR_DM Satellite Satellite -590 882 590 2 597 31 0 0 0 chr3L 1700929 1700960 -22842597 + AT_rich Low_complexity Low_complexity 1 31 0 2 597 24 53 0 0 chr3L 1702097 1702135 -22841422 + AT_rich Low_complexity Low_complexity 1 38 0 2 597 24 0 0 0 chr3L 1702176 1702200 -22841357 + AT_rich Low_complexity Low_complexity 1 24 0 2 597 205 179 0 0 chr3L 1703068 1703107 -22840450 + (CAATC)n Simple_repeat Simple_repeat 2 40 0 2 598 234 283 0 0 chr3L 1710386 1710446 -22833111 + (CTG)n Simple_repeat Simple_repeat 3 62 0 2 598 215 209 0 0 chr3L 1714245 1714288 -22829269 + (CAA)n Simple_repeat Simple_repeat 1 43 0 2 598 22 0 0 0 chr3L 1715713 1715735 -22827822 + AT_rich Low_complexity Low_complexity 1 22 0 2 598 209 208 0 0 chr3L 1723069 1723117 -22820440 + T-rich Low_complexity Low_complexity 1 48 0 2 598 24 32 0 0 chr3L 1739436 1739467 -22804090 + AT_rich Low_complexity Low_complexity 1 31 0 2 598 1586 0 0 0 chr3L 1740908 1741094 -22802463 + POGON1 DNA Pogo 1 186 0 2 598 202 200 0 0 chr3L 1750583 1750623 -22792934 + (CAG)n Simple_repeat Simple_repeat 1 40 0 2 598 23 33 0 0 chr3L 1755929 1755959 -22787598 + AT_rich Low_complexity Low_complexity 1 30 0 2 598 44 20 0 0 chr3L 1775426 1775477 -22768080 + AT_rich Low_complexity Low_complexity 1 51 0 2 598 25 0 0 0 chr3L 1784110 1784135 -22759422 + AT_rich Low_complexity Low_complexity 1 25 0 2 598 21 0 0 0 chr3L 1802919 1802940 -22740617 + AT_rich Low_complexity Low_complexity 1 21 0 2 598 195 42 0 0 chr3L 1805430 1805454 -22738103 + (CAG)n Simple_repeat Simple_repeat 3 26 0 2 598 243 173 0 100 chr3L 1805557 1805572 -22737985 + ROO_I LTR Pao 644 723 -7532 2 598 245 243 40 0 chr3L 1805572 1805646 -22737911 + BS LINE Jockey 2047 2123 -3003 2 598 29 78 0 0 chr3L 1805991 1806055 -22737502 + AT_rich Low_complexity Low_complexity 1 64 0 2 598 28 0 0 0 chr3L 1806147 1806175 -22737382 + AT_rich Low_complexity Low_complexity 1 28 0 2 598 32 43 0 0 chr3L 1809783 1809829 -22733728 + AT_rich Low_complexity Low_complexity 1 46 0 2 598 23 0 0 0 chr3L 1810806 1810829 -22732728 + AT_rich Low_complexity Low_complexity 1 23 0 2 598 26 30 0 0 chr3L 1812968 1813001 -22730556 + AT_rich Low_complexity Low_complexity 1 33 0 2 598 225 159 0 0 chr3L 1813962 1814006 -22729551 + (ATTCG)n Simple_repeat Simple_repeat 3 46 0 2 598 211 146 24 0 chr3L 1815315 1815356 -22728201 + T-rich Low_complexity Low_complexity 5 46 0 2 598 25 51 0 0 chr3L 1815981 1816020 -22727537 + AT_rich Low_complexity Low_complexity 1 39 0 2 598 207 0 0 0 chr3L 1818453 1818476 -22725081 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2 598 22 35 0 0 chr3L 1819913 1819942 -22723615 + AT_rich Low_complexity Low_complexity 1 29 0 2 598 266 219 14 0 chr3L 1822490 1822563 -22720994 + (CCA)n Simple_repeat Simple_repeat 2 75 0 2 598 207 156 0 0 chr3L 1826937 1826969 -22716588 + (CGGT)n Simple_repeat Simple_repeat 4 35 0 2 598 189 74 0 0 chr3L 1830880 1830907 -22712650 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 598 22 35 0 0 chr3L 1831087 1831116 -22712441 + AT_rich Low_complexity Low_complexity 1 29 0 2 598 22 0 0 0 chr3L 1832570 1832592 -22710965 + AT_rich Low_complexity Low_complexity 1 22 0 2 598 256 197 13 38 chr3L 1833260 1833339 -22710218 + T-rich Low_complexity Low_complexity 5 81 0 2 599 22 35 0 0 chr3L 1838096 1838125 -22705432 + AT_rich Low_complexity Low_complexity 1 29 0 2 599 201 122 24 24 chr3L 1839442 1839484 -22704073 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2 599 23 0 0 0 chr3L 1840375 1840398 -22703159 + AT_rich Low_complexity Low_complexity 1 23 0 2 599 180 0 0 0 chr3L 1843484 1843504 -22700053 + (C)n Simple_repeat Simple_repeat 1 20 0 2 599 180 97 0 0 chr3L 1844259 1844290 -22699267 + (ACTAG)n Simple_repeat Simple_repeat 2 32 0 2 599 29 28 0 0 chr3L 1847219 1847255 -22696302 + AT_rich Low_complexity Low_complexity 1 36 0 2 599 249 83 0 0 chr3L 1847595 1847631 -22695926 + (CACTC)n Simple_repeat Simple_repeat 2 37 0 2 599 213 180 0 0 chr3L 1851925 1851975 -22691582 + (CTG)n Simple_repeat Simple_repeat 3 52 0 2 599 21 0 0 0 chr3L 1859115 1859136 -22684421 + AT_rich Low_complexity Low_complexity 1 21 0 2 599 30 45 0 0 chr3L 1859150 1859194 -22684363 + AT_rich Low_complexity Low_complexity 1 44 0 2 599 300 183 24 12 chr3L 1859794 1859877 -22683680 + (TG)n Simple_repeat Simple_repeat 1 84 0 2 599 25 51 0 0 chr3L 1860326 1860365 -22683192 + AT_rich Low_complexity Low_complexity 1 39 0 2 599 230 229 0 0 chr3L 1861497 1861558 -22681999 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 599 31 76 0 0 chr3L 1862314 1862380 -22681177 + AT_rich Low_complexity Low_complexity 1 66 0 2 599 27 0 0 0 chr3L 1862420 1862447 -22681110 + AT_rich Low_complexity Low_complexity 1 27 0 2 599 264 100 0 0 chr3L 1866393 1866433 -22677124 + (GGA)n Simple_repeat Simple_repeat 2 41 0 2 599 22 35 0 0 chr3L 1868652 1868681 -22674876 + AT_rich Low_complexity Low_complexity 1 29 0 2 599 210 220 0 0 chr3L 1869371 1869430 -22674127 + (ATTCG)n Simple_repeat Simple_repeat 5 63 0 2 599 366 139 0 0 chr3L 1878476 1878548 -22665009 + (CTG)n Simple_repeat Simple_repeat 3 74 0 2 599 201 39 0 0 chr3L 1880201 1880227 -22663330 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 599 222 217 0 0 chr3L 1881589 1881635 -22661922 + A-rich Low_complexity Low_complexity 5 50 0 2 599 21 57 0 0 chr3L 1883429 1883464 -22660093 + AT_rich Low_complexity Low_complexity 1 35 0 2 599 21 36 0 0 chr3L 1883710 1883738 -22659819 + AT_rich Low_complexity Low_complexity 1 28 0 2 599 189 147 0 0 chr3L 1885543 1885577 -22657980 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 599 249 128 0 0 chr3L 1886388 1886427 -22657130 + DOC2_DM LINE Jockey 552 590 -4203 2 599 23 0 0 0 chr3L 1894574 1894597 -22648960 + AT_rich Low_complexity Low_complexity 1 23 0 2 599 35 24 0 0 chr3L 1897852 1897894 -22645663 + AT_rich Low_complexity Low_complexity 1 42 0 2 599 192 77 0 0 chr3L 1902584 1902610 -22640947 + (CTG)n Simple_repeat Simple_repeat 1 26 0 2 599 34 55 0 0 chr3L 1903339 1903394 -22640163 + AT_rich Low_complexity Low_complexity 1 55 0 2 599 21 0 0 0 chr3L 1903561 1903582 -22639975 + AT_rich Low_complexity Low_complexity 1 21 0 2 599 23 33 0 0 chr3L 1910767 1910797 -22632760 + AT_rich Low_complexity Low_complexity 1 30 0 2 599 27 0 0 0 chr3L 1914851 1914878 -22628679 + AT_rich Low_complexity Low_complexity 1 27 0 2 599 28 29 0 0 chr3L 1919194 1919229 -22624328 + AT_rich Low_complexity Low_complexity 1 35 0 2 599 207 0 0 0 chr3L 1919748 1919771 -22623786 + (GA)n Simple_repeat Simple_repeat 1 23 0 2 599 30 45 0 0 chr3L 1920812 1920856 -22622701 + AT_rich Low_complexity Low_complexity 1 44 0 2 599 220 214 0 0 chr3L 1921050 1921092 -22622465 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 599 186 143 0 0 chr3L 1921101 1921136 -22622421 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 599 201 159 0 0 chr3L 1923306 1923350 -22620207 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 599 231 103 0 0 chr3L 1923755 1923794 -22619763 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 2 599 232 270 0 0 chr3L 1924321 1924395 -22619162 + (CAG)n Simple_repeat Simple_repeat 3 76 0 2 599 221 228 0 0 chr3L 1924498 1924555 -22619002 + (CAG)n Simple_repeat Simple_repeat 3 59 0 2 599 21 36 0 0 chr3L 1925000 1925028 -22618529 + AT_rich Low_complexity Low_complexity 1 28 0 2 599 304 22 22 22 chr3L 1926595 1926641 -22616916 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 599 189 0 0 0 chr3L 1926931 1926952 -22616605 + (ATG)n Simple_repeat Simple_repeat 3 23 0 2 599 216 0 0 0 chr3L 1929059 1929083 -22614474 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 599 185 65 32 0 chr3L 1930100 1930131 -22613426 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 599 338 33 32 32 chr3L 1933298 1933360 -22610197 + (CAG)n Simple_repeat Simple_repeat 1 62 0 2 599 32 57 0 0 chr3L 1939131 1939184 -22604373 + AT_rich Low_complexity Low_complexity 1 53 0 2 599 209 83 0 27 chr3L 1940240 1940277 -22603280 + (CATTC)n Simple_repeat Simple_repeat 2 37 0 2 599 21 0 0 0 chr3L 1945081 1945102 -22598455 + AT_rich Low_complexity Low_complexity 1 21 0 2 599 23 0 0 0 chr3L 1947620 1947643 -22595914 + AT_rich Low_complexity Low_complexity 1 23 0 2 599 22 35 0 0 chr3L 1949244 1949273 -22594284 + AT_rich Low_complexity Low_complexity 1 29 0 2 599 21 36 0 0 chr3L 1950342 1950370 -22593187 + AT_rich Low_complexity Low_complexity 1 28 0 2 599 22 0 0 0 chr3L 1962179 1962201 -22581356 + AT_rich Low_complexity Low_complexity 1 22 0 2 599 27 85 0 28 chr3L 1964253 1964362 -22579195 + AT_rich Low_complexity Low_complexity 1 106 0 2 600 225 296 0 36 chr3L 1970544 1970628 -22572929 + CT-rich Low_complexity Low_complexity 6 86 0 2 600 24 0 0 0 chr3L 1974404 1974428 -22569129 + AT_rich Low_complexity Low_complexity 1 24 0 2 600 222 62 0 0 chr3L 1975553 1975585 -22567972 + (CAGG)n Simple_repeat Simple_repeat 4 35 0 2 600 269 109 22 0 chr3L 1977287 1977333 -22566224 + (TGAA)n Simple_repeat Simple_repeat 4 50 0 2 600 183 100 0 0 chr3L 1977351 1977381 -22566176 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 2 600 183 100 0 0 chr3L 1980279 1980309 -22563248 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 600 204 200 44 0 chr3L 1986025 1986070 -22557487 + (TATG)n Simple_repeat Simple_repeat 2 48 0 2 600 220 220 0 0 chr3L 1994008 1994058 -22549499 + A-rich Low_complexity Low_complexity 1 50 0 2 600 30 0 0 0 chr3L 1997088 1997118 -22546439 + AT_rich Low_complexity Low_complexity 1 30 0 2 600 215 232 14 0 chr3L 2003533 2003602 -22539955 + T-rich Low_complexity Low_complexity 5 74 0 2 600 200 188 0 0 chr3L 2004005 2004037 -22539520 + (CACTC)n Simple_repeat Simple_repeat 4 35 0 2 600 204 40 0 0 chr3L 2005044 2005069 -22538488 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 2 600 24 0 0 0 chr3L 2005906 2005930 -22537627 + AT_rich Low_complexity Low_complexity 1 24 0 2 600 404 128 0 13 chr3L 2018995 2019074 -22524483 + (TCCA)n Simple_repeat Simple_repeat 2 79 0 2 600 24 53 0 0 chr3L 2020480 2020518 -22523039 + AT_rich Low_complexity Low_complexity 1 38 0 2 600 21 0 0 0 chr3L 2023638 2023659 -22519898 + AT_rich Low_complexity Low_complexity 1 21 0 2 600 216 0 0 0 chr3L 2028415 2028439 -22515118 + (A)n Simple_repeat Simple_repeat 1 24 0 2 600 261 0 0 0 chr3L 2029152 2029181 -22514376 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 600 180 97 0 0 chr3L 2029429 2029460 -22514097 + (A)n Simple_repeat Simple_repeat 1 31 0 2 600 33 0 0 0 chr3L 2033338 2033371 -22510186 + AT_rich Low_complexity Low_complexity 1 33 0 2 600 26 0 0 0 chr3L 2034077 2034103 -22509454 + AT_rich Low_complexity Low_complexity 1 26 0 2 600 26 64 0 0 chr3L 2076230 2076277 -22467280 + AT_rich Low_complexity Low_complexity 1 47 0 2 600 21 57 0 0 chr3L 2081591 2081626 -22461931 + AT_rich Low_complexity Low_complexity 1 35 0 2 600 211 140 0 23 chr3L 2088983 2089027 -22454530 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 2 600 23 0 0 0 chr3L 2090377 2090400 -22453157 + AT_rich Low_complexity Low_complexity 1 23 0 2 601 25 0 0 0 chr3L 2100532 2100557 -22443000 + AT_rich Low_complexity Low_complexity 1 25 0 2 601 26 74 0 0 chr3L 2106957 2107011 -22436546 + AT_rich Low_complexity Low_complexity 1 54 0 2 601 243 250 15 0 chr3L 2107320 2107388 -22436169 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 2 601 2442 0 0 0 chr3L 2108305 2108581 -22434976 - Copia_LTR LTR Copia 0 276 1 2 601 37077 1 0 0 chr3L 2108581 2113175 -22430382 - Copia_I LTR Copia 0 4593 1 2 601 2442 0 0 0 chr3L 2113175 2113451 -22430106 - Copia_LTR LTR Copia 0 276 1 2 601 198 118 0 0 chr3L 2114792 2114826 -22428731 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 601 234 0 0 0 chr3L 2121315 2121341 -22422216 + (GGA)n Simple_repeat Simple_repeat 2 27 0 2 601 22 56 0 0 chr3L 2124838 2124874 -22418683 + AT_rich Low_complexity Low_complexity 1 36 0 2 601 189 107 0 0 chr3L 2125494 2125522 -22418035 + (CTG)n Simple_repeat Simple_repeat 3 30 0 2 601 24 53 0 0 chr3L 2126682 2126720 -22416837 + AT_rich Low_complexity Low_complexity 1 38 0 2 601 237 83 0 0 chr3L 2128447 2128483 -22415074 + (TGG)n Simple_repeat Simple_repeat 1 36 0 2 601 180 0 0 0 chr3L 2138793 2138813 -22404744 + (CGAGT)n Simple_repeat Simple_repeat 5 24 0 2 601 207 0 0 0 chr3L 2144434 2144457 -22399100 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 601 237 33 0 0 chr3L 2155452 2155482 -22388075 + (T)n Simple_repeat Simple_repeat 1 30 0 2 601 200 204 23 0 chr3L 2156828 2156872 -22386685 + (CTG)n Simple_repeat Simple_repeat 1 45 0 2 601 201 147 0 0 chr3L 2165385 2165419 -22378138 + (TTTTTG)n Simple_repeat Simple_repeat 5 38 0 2 601 28 79 0 0 chr3L 2174502 2174565 -22368992 + AT_rich Low_complexity Low_complexity 1 63 0 2 601 21 0 0 0 chr3L 2177748 2177769 -22365788 + AT_rich Low_complexity Low_complexity 1 21 0 2 601 204 40 0 0 chr3L 2180279 2180304 -22363253 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 601 21 36 0 0 chr3L 2180565 2180593 -22362964 + AT_rich Low_complexity Low_complexity 1 28 0 2 601 240 35 0 0 chr3L 2182298 2182327 -22361230 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 601 27 49 0 0 chr3L 2192974 2193015 -22350542 + AT_rich Low_complexity Low_complexity 1 41 0 2 601 21 57 0 0 chr3L 2196780 2196815 -22346742 + AT_rich Low_complexity Low_complexity 1 35 0 2 601 23 0 0 0 chr3L 2203142 2203165 -22340392 + AT_rich Low_complexity Low_complexity 1 23 0 2 601 207 0 0 0 chr3L 2206409 2206432 -22337125 + (T)n Simple_repeat Simple_repeat 1 23 0 2 601 198 71 0 0 chr3L 2209454 2209482 -22334075 + (CAGAA)n Simple_repeat Simple_repeat 1 28 0 2 601 235 67 0 62 chr3L 2217769 2217817 -22325740 + (CAAAC)n Simple_repeat Simple_repeat 5 49 0 2 601 183 129 0 0 chr3L 2220226 2220257 -22323300 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 601 496 281 52 43 chr3L 2222138 2222826 -22320731 - SAR_DM Satellite Satellite -534 693 1 2 601 21 0 0 0 chr3L 2222893 2222914 -22320643 + AT_rich Low_complexity Low_complexity 1 21 0 2 601 230 136 23 0 chr3L 2226269 2226313 -22317244 + (TACTG)n Simple_repeat Simple_repeat 1 45 0 2 602 35 0 0 0 chr3L 2228906 2228941 -22314616 + AT_rich Low_complexity Low_complexity 1 35 0 2 602 22 0 0 0 chr3L 2237781 2237803 -22305754 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 203 176 0 0 chr3L 2238099 2238133 -22305424 + (CATA)n Simple_repeat Simple_repeat 4 37 0 2 602 292 224 9 45 chr3L 2243884 2243996 -22299561 + RSP Satellite Satellite 4 111 -7 2 602 225 65 0 0 chr3L 2247373 2247404 -22296153 + (TTAG)n Simple_repeat Simple_repeat 3 33 0 2 602 218 180 16 0 chr3L 2252744 2252805 -22290752 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 602 23 0 0 0 chr3L 2262764 2262787 -22280770 + AT_rich Low_complexity Low_complexity 1 23 0 2 602 22 0 0 0 chr3L 2281093 2281115 -22262442 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 21 100 0 0 chr3L 2281142 2281212 -22262345 + AT_rich Low_complexity Low_complexity 1 70 0 2 602 192 152 0 0 chr3L 2285708 2285741 -22257816 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 2 602 24 53 0 0 chr3L 2299585 2299623 -22243934 + AT_rich Low_complexity Low_complexity 1 38 0 2 602 22 0 0 0 chr3L 2307366 2307388 -22236169 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 41 0 0 0 chr3L 2309802 2309843 -22233714 + AT_rich Low_complexity Low_complexity 1 41 0 2 602 22 0 0 0 chr3L 2312845 2312867 -22230690 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 21 0 0 0 chr3L 2320624 2320645 -22222912 + AT_rich Low_complexity Low_complexity 1 21 0 2 602 300 176 0 0 chr3L 2322770 2322838 -22220719 + (AACTG)n Simple_repeat Simple_repeat 3 70 0 2 602 21 0 0 0 chr3L 2323014 2323035 -22220522 + AT_rich Low_complexity Low_complexity 1 21 0 2 602 34 72 0 0 chr3L 2323120 2323189 -22220368 + AT_rich Low_complexity Low_complexity 1 69 0 2 602 27 0 0 0 chr3L 2323266 2323293 -22220264 + AT_rich Low_complexity Low_complexity 1 27 0 2 602 22 0 0 0 chr3L 2324766 2324788 -22218769 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 201 94 0 0 chr3L 2325452 2325484 -22218073 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 602 180 0 0 0 chr3L 2337974 2337994 -22205563 + (A)n Simple_repeat Simple_repeat 1 20 0 2 602 26 0 0 0 chr3L 2338248 2338274 -22205283 + AT_rich Low_complexity Low_complexity 1 26 0 2 602 21 0 0 0 chr3L 2338504 2338525 -22205032 + AT_rich Low_complexity Low_complexity 1 21 0 2 602 180 111 0 0 chr3L 2338567 2338594 -22204963 + (CAA)n Simple_repeat Simple_repeat 3 29 0 2 602 230 219 0 0 chr3L 2338876 2338917 -22204640 + (CTG)n Simple_repeat Simple_repeat 3 43 0 2 602 22 35 0 0 chr3L 2342478 2342507 -22201050 + AT_rich Low_complexity Low_complexity 1 29 0 2 602 209 98 24 0 chr3L 2345509 2345550 -22198007 + (TTAAA)n Simple_repeat Simple_repeat 2 43 0 2 602 23 0 0 0 chr3L 2346925 2346948 -22196609 + AT_rich Low_complexity Low_complexity 1 23 0 2 602 207 0 0 0 chr3L 2349952 2349975 -22193582 + (A)n Simple_repeat Simple_repeat 1 23 0 2 602 22 0 0 0 chr3L 2356775 2356797 -22186760 + AT_rich Low_complexity Low_complexity 1 22 0 2 602 26 50 0 0 chr3L 2356944 2356984 -22186573 + AT_rich Low_complexity Low_complexity 1 40 0 2 602 210 37 0 0 chr3L 2358805 2358832 -22184725 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 603 28 0 0 0 chr3L 2360444 2360472 -22183085 + AT_rich Low_complexity Low_complexity 1 28 0 2 603 27 49 0 0 chr3L 2367853 2367894 -22175663 + AT_rich Low_complexity Low_complexity 1 41 0 2 603 202 204 0 0 chr3L 2368731 2368775 -22174782 + (CTG)n Simple_repeat Simple_repeat 2 45 0 2 603 25 65 0 0 chr3L 2372067 2372113 -22171444 + AT_rich Low_complexity Low_complexity 1 46 0 2 603 353 295 8 8 chr3L 2374424 2374554 -22169003 + GA-rich Low_complexity Low_complexity 1 130 0 2 603 195 42 0 0 chr3L 2380537 2380561 -22162996 + (TTCTG)n Simple_repeat Simple_repeat 2 25 0 2 603 23 0 0 0 chr3L 2383503 2383526 -22160031 + AT_rich Low_complexity Low_complexity 1 23 0 2 603 219 36 0 0 chr3L 2383556 2383584 -22159973 + (T)n Simple_repeat Simple_repeat 1 28 0 2 603 217 220 0 0 chr3L 2386426 2386476 -22157081 + CT-rich Low_complexity Low_complexity 3 52 0 2 603 22 0 0 0 chr3L 2388039 2388061 -22155496 + AT_rich Low_complexity Low_complexity 1 22 0 2 603 21 0 0 0 chr3L 2394454 2394475 -22149082 + AT_rich Low_complexity Low_complexity 1 21 0 2 603 22 0 0 0 chr3L 2396417 2396439 -22147118 + AT_rich Low_complexity Low_complexity 1 22 0 2 603 212 0 36 0 chr3L 2396609 2396637 -22146920 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2 603 26 0 0 0 chr3L 2398788 2398814 -22144743 + AT_rich Low_complexity Low_complexity 1 26 0 2 603 21 0 0 0 chr3L 2401816 2401837 -22141720 + AT_rich Low_complexity Low_complexity 1 21 0 2 603 23 33 0 0 chr3L 2409080 2409110 -22134447 + AT_rich Low_complexity Low_complexity 1 30 0 2 603 225 94 0 0 chr3L 2412720 2412752 -22130805 + (CACCAT)n Simple_repeat Simple_repeat 6 37 0 2 603 207 0 0 0 chr3L 2414599 2414622 -22128935 + (T)n Simple_repeat Simple_repeat 1 23 0 2 603 27 0 0 0 chr3L 2416097 2416124 -22127433 + AT_rich Low_complexity Low_complexity 1 27 0 2 603 21 36 0 0 chr3L 2417240 2417268 -22126289 + AT_rich Low_complexity Low_complexity 1 28 0 2 603 28 71 0 0 chr3L 2417542 2417598 -22125959 + AT_rich Low_complexity Low_complexity 1 56 0 2 603 288 154 0 0 chr3L 2417819 2417871 -22125686 + (TTG)n Simple_repeat Simple_repeat 1 52 0 2 603 300 291 12 0 chr3L 2419201 2419287 -22124270 + (TTG)n Simple_repeat Simple_repeat 1 87 0 2 603 185 94 31 0 chr3L 2422913 2422945 -22120612 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 2 603 21 0 0 0 chr3L 2426443 2426464 -22117093 + AT_rich Low_complexity Low_complexity 1 21 0 2 603 202 156 22 22 chr3L 2427376 2427422 -22116135 + GA-rich Low_complexity Low_complexity 1 46 0 2 603 186 71 0 0 chr3L 2427538 2427566 -22115991 + (A)n Simple_repeat Simple_repeat 1 28 0 2 603 222 128 0 0 chr3L 2429112 2429151 -22114406 + (A)n Simple_repeat Simple_repeat 1 39 0 2 603 213 65 0 0 chr3L 2431897 2431928 -22111629 + (T)n Simple_repeat Simple_repeat 1 31 0 2 603 29 60 0 0 chr3L 2434333 2434383 -22109174 + AT_rich Low_complexity Low_complexity 1 50 0 2 603 236 30 0 29 chr3L 2435412 2435446 -22108111 + (CAG)n Simple_repeat Simple_repeat 1 33 0 2 603 255 61 0 0 chr3L 2435576 2435609 -22107948 + (CAG)n Simple_repeat Simple_repeat 2 34 0 2 603 23 0 0 0 chr3L 2436480 2436503 -22107054 + AT_rich Low_complexity Low_complexity 1 23 0 2 603 268 222 0 16 chr3L 2437097 2437161 -22106396 + (TTGGGG)n Simple_repeat Simple_repeat 4 66 0 2 603 197 130 43 0 chr3L 2439136 2439182 -22104375 + A-rich Low_complexity Low_complexity 5 52 0 2 603 180 0 0 0 chr3L 2441445 2441465 -22102092 + (ATG)n Simple_repeat Simple_repeat 2 21 0 2 603 192 125 0 0 chr3L 2442303 2442335 -22101222 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 603 214 269 0 25 chr3L 2442486 2442531 -22101026 + (CAA)n Simple_repeat Simple_repeat 3 46 0 2 603 309 140 0 0 chr3L 2442531 2442588 -22100969 + (CAG)n Simple_repeat Simple_repeat 3 59 0 2 603 214 269 0 25 chr3L 2442588 2442622 -22100935 + (CAA)n Simple_repeat Simple_repeat 2 34 0 2 603 3986 5 0 0 chr3L 2447559 2447987 -22095570 + ROO_LTR LTR Pao 1 428 0 2 603 74582 2 2 0 chr3L 2447987 2456229 -22087328 + ROO_I LTR Pao 1 8256 0 2 603 3969 7 0 0 chr3L 2456229 2456657 -22086900 + ROO_LTR LTR Pao 1 428 0 2 603 21 0 0 0 chr3L 2458467 2458488 -22085069 + AT_rich Low_complexity Low_complexity 1 21 0 2 603 28 0 0 0 chr3L 2461544 2461572 -22081985 + AT_rich Low_complexity Low_complexity 1 28 0 2 603 180 0 0 0 chr3L 2462564 2462584 -22080973 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 603 227 156 0 62 chr3L 2463527 2463575 -22079982 + ROO_I LTR Pao 652 696 -7560 2 603 26 30 0 0 chr3L 2464775 2464808 -22078749 + AT_rich Low_complexity Low_complexity 1 33 0 2 603 214 162 0 0 chr3L 2465533 2465570 -22077987 + (CAG)n Simple_repeat Simple_repeat 1 37 0 2 603 222 262 0 0 chr3L 2466024 2466085 -22077472 + (CAG)n Simple_repeat Simple_repeat 1 61 0 2 603 29 0 0 0 chr3L 2467123 2467152 -22076405 + AT_rich Low_complexity Low_complexity 1 29 0 2 603 21 0 0 0 chr3L 2469087 2469108 -22074449 + AT_rich Low_complexity Low_complexity 1 21 0 2 603 216 67 0 0 chr3L 2474853 2474883 -22068674 + (TGG)n Simple_repeat Simple_repeat 2 31 0 2 603 25 31 0 0 chr3L 2479495 2479527 -22064030 + AT_rich Low_complexity Low_complexity 1 32 0 2 603 195 119 0 92 chr3L 2487802 2487867 -22055690 + (CTG)n Simple_repeat Simple_repeat 1 59 0 2 603 202 241 17 0 chr3L 2489973 2490031 -22053526 + (CAA)n Simple_repeat Simple_repeat 1 59 0 2 603 216 0 0 0 chr3L 2490344 2490368 -22053189 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2 604 22 0 0 0 chr3L 2490415 2490437 -22053120 + AT_rich Low_complexity Low_complexity 1 22 0 2 604 189 0 0 0 chr3L 2492520 2492541 -22051016 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 604 204 125 0 0 chr3L 2493287 2493319 -22050238 + (GCTTG)n Simple_repeat Simple_repeat 2 33 0 2 604 22 0 0 0 chr3L 2499001 2499023 -22044534 + AT_rich Low_complexity Low_complexity 1 22 0 2 604 26 50 0 0 chr3L 2499188 2499228 -22044329 + AT_rich Low_complexity Low_complexity 1 40 0 2 604 200 213 0 0 chr3L 2506288 2506335 -22037222 + T-rich Low_complexity Low_complexity 1 47 0 2 604 245 282 30 30 chr3L 2508103 2508238 -22035319 + (TATATG)n Simple_repeat Simple_repeat 2 136 0 2 604 246 105 0 0 chr3L 2510075 2510113 -22033444 + (CTG)n Simple_repeat Simple_repeat 2 39 0 2 604 200 336 0 0 chr3L 2513868 2513978 -22029579 + (TCG)n Simple_repeat Simple_repeat 1 110 0 2 604 22 0 0 0 chr3L 2516222 2516244 -22027313 + AT_rich Low_complexity Low_complexity 1 22 0 2 604 21 0 0 0 chr3L 2516863 2516884 -22026673 + AT_rich Low_complexity Low_complexity 1 21 0 2 604 288 0 0 0 chr3L 2520217 2520249 -22023308 + (A)n Simple_repeat Simple_repeat 1 32 0 2 604 186 43 0 0 chr3L 2522453 2522476 -22021081 + (CAT)n Simple_repeat Simple_repeat 3 25 0 2 604 21 36 0 0 chr3L 2529145 2529173 -22014384 + AT_rich Low_complexity Low_complexity 1 28 0 2 604 186 191 0 0 chr3L 2536055 2536097 -22007460 + (CGG)n Simple_repeat Simple_repeat 2 43 0 2 604 24 0 0 0 chr3L 2539569 2539593 -22003964 + AT_rich Low_complexity Low_complexity 1 24 0 2 604 23 86 0 0 chr3L 2541588 2541646 -22001911 + AT_rich Low_complexity Low_complexity 1 58 0 2 604 183 80 0 0 chr3L 2545524 2545549 -21998008 + (AAATG)n Simple_repeat Simple_repeat 1 25 0 2 604 189 74 0 0 chr3L 2553246 2553273 -21990284 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 604 30 45 0 0 chr3L 2554812 2554856 -21988701 + AT_rich Low_complexity Low_complexity 1 44 0 2 604 201 74 0 0 chr3L 2555637 2555664 -21987893 + (CTTTG)n Simple_repeat Simple_repeat 3 29 0 2 604 351 65 0 0 chr3L 2556119 2556165 -21987392 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 604 218 56 0 27 chr3L 2556262 2556299 -21987258 + (TTG)n Simple_repeat Simple_repeat 3 38 0 2 604 276 91 0 0 chr3L 2556513 2556557 -21987000 + (GATTG)n Simple_repeat Simple_repeat 2 45 0 2 604 29 0 0 0 chr3L 2558447 2558476 -21985081 + AT_rich Low_complexity Low_complexity 1 29 0 2 604 264 130 0 0 chr3L 2560237 2560283 -21983274 + (CCG)n Simple_repeat Simple_repeat 2 47 0 2 604 372 103 0 0 chr3L 2561931 2561989 -21981568 + (CTG)n Simple_repeat Simple_repeat 3 60 0 2 604 21 0 0 0 chr3L 2562934 2562955 -21980602 + AT_rich Low_complexity Low_complexity 1 21 0 2 604 207 0 0 0 chr3L 2563393 2563416 -21980141 + (TA)n Simple_repeat Simple_repeat 2 24 0 2 604 22 0 0 0 chr3L 2564245 2564267 -21979290 + AT_rich Low_complexity Low_complexity 1 22 0 2 604 223 94 75 0 chr3L 2564814 2564867 -21978690 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 604 180 0 0 0 chr3L 2565629 2565649 -21977908 + (TAG)n Simple_repeat Simple_repeat 3 22 0 2 604 225 65 0 0 chr3L 2565852 2565883 -21977674 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 604 188 163 0 23 chr3L 2566518 2566562 -21976995 + (CTG)n Simple_repeat Simple_repeat 1 43 0 2 604 25 0 0 0 chr3L 2574665 2574690 -21968867 + AT_rich Low_complexity Low_complexity 1 25 0 2 604 258 81 0 0 chr3L 2574823 2574860 -21968697 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 604 189 0 0 0 chr3L 2574968 2574989 -21968568 + (A)n Simple_repeat Simple_repeat 1 21 0 2 604 258 173 0 0 chr3L 2576009 2576084 -21967473 + CT-rich Low_complexity Low_complexity 2 76 0 2 604 21 36 0 0 chr3L 2576373 2576401 -21967156 + AT_rich Low_complexity Low_complexity 1 28 0 2 604 234 62 0 0 chr3L 2577228 2577260 -21966297 + (CAGT)n Simple_repeat Simple_repeat 1 32 0 2 604 224 100 0 24 chr3L 2578457 2578498 -21965059 + (CAA)n Simple_repeat Simple_repeat 1 40 0 2 604 192 77 0 0 chr3L 2578655 2578681 -21964876 + (CTG)n Simple_repeat Simple_repeat 3 28 0 2 604 21 0 0 0 chr3L 2578833 2578854 -21964703 + AT_rich Low_complexity Low_complexity 1 21 0 2 604 234 260 0 27 chr3L 2585973 2586048 -21957509 + CT-rich Low_complexity Low_complexity 2 74 0 2 604 29 28 0 0 chr3L 2586765 2586801 -21956756 + AT_rich Low_complexity Low_complexity 1 36 0 2 604 34 24 0 0 chr3L 2587281 2587322 -21956235 + AT_rich Low_complexity Low_complexity 1 41 0 2 604 180 77 0 0 chr3L 2590048 2590074 -21953483 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 604 21 0 0 0 chr3L 2590580 2590601 -21952956 + AT_rich Low_complexity Low_complexity 1 21 0 2 604 217 159 23 0 chr3L 2592914 2592958 -21950599 + (CAG)n Simple_repeat Simple_repeat 3 47 0 2 604 22 99 0 0 chr3L 2600177 2600248 -21943309 + AT_rich Low_complexity Low_complexity 1 71 0 2 604 24 0 0 0 chr3L 2605273 2605297 -21938260 + AT_rich Low_complexity Low_complexity 1 24 0 2 604 25 0 0 0 chr3L 2608867 2608892 -21934665 + AT_rich Low_complexity Low_complexity 1 25 0 2 604 23 0 0 0 chr3L 2609780 2609803 -21933754 + AT_rich Low_complexity Low_complexity 1 23 0 2 604 227 133 0 22 chr3L 2613987 2614033 -21929524 + (CAA)n Simple_repeat Simple_repeat 1 45 0 2 604 216 111 0 0 chr3L 2614069 2614105 -21929452 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 604 210 71 0 0 chr3L 2616593 2616621 -21926936 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 604 195 42 0 0 chr3L 2617512 2617536 -21926021 + (GGAAA)n Simple_repeat Simple_repeat 4 27 0 2 604 183 139 0 0 chr3L 2617755 2617791 -21925766 + (TCC)n Simple_repeat Simple_repeat 3 38 0 2 604 183 42 0 0 chr3L 2620224 2620248 -21923309 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 605 219 69 0 0 chr3L 2625083 2625112 -21918445 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 605 24 96 0 0 chr3L 2625664 2625737 -21917820 + AT_rich Low_complexity Low_complexity 1 73 0 2 605 25 31 0 0 chr3L 2626669 2626701 -21916856 + AT_rich Low_complexity Low_complexity 1 32 0 2 605 22 0 0 0 chr3L 2627732 2627754 -21915803 + AT_rich Low_complexity Low_complexity 1 22 0 2 605 23 0 0 0 chr3L 2629693 2629716 -21913841 + AT_rich Low_complexity Low_complexity 1 23 0 2 605 27 49 0 0 chr3L 2631375 2631416 -21912141 + AT_rich Low_complexity Low_complexity 1 41 0 2 605 278 265 12 24 chr3L 2632126 2632211 -21911346 + (CATA)n Simple_repeat Simple_repeat 3 86 0 2 605 26 0 0 0 chr3L 2633307 2633333 -21910224 + AT_rich Low_complexity Low_complexity 1 26 0 2 605 200 289 24 24 chr3L 2634959 2635044 -21908513 + (CATA)n Simple_repeat Simple_repeat 1 85 0 2 605 21 36 0 0 chr3L 2635590 2635618 -21907939 + AT_rich Low_complexity Low_complexity 1 28 0 2 605 200 241 0 18 chr3L 2636116 2636171 -21907386 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 605 215 231 19 0 chr3L 2636383 2636435 -21907122 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 605 25 31 0 0 chr3L 2636498 2636530 -21907027 + AT_rich Low_complexity Low_complexity 1 32 0 2 605 186 103 0 0 chr3L 2638083 2638112 -21905445 + (ATG)n Simple_repeat Simple_repeat 3 31 0 2 605 222 91 0 0 chr3L 2638776 2638809 -21904748 + (CGA)n Simple_repeat Simple_repeat 2 34 0 2 605 23 68 0 0 chr3L 2641790 2641834 -21901723 + AT_rich Low_complexity Low_complexity 1 44 0 2 605 261 75 0 0 chr3L 2641893 2641933 -21901624 + (CCAA)n Simple_repeat Simple_repeat 1 40 0 2 605 246 32 0 0 chr3L 2646368 2646399 -21897158 + (CCA)n Simple_repeat Simple_repeat 3 33 0 2 605 33 0 0 0 chr3L 2651915 2651948 -21891609 + AT_rich Low_complexity Low_complexity 1 33 0 2 605 25 65 0 0 chr3L 2651980 2652026 -21891531 + AT_rich Low_complexity Low_complexity 1 46 0 2 605 30 27 0 0 chr3L 2655484 2655521 -21888036 + AT_rich Low_complexity Low_complexity 1 37 0 2 605 317 230 0 0 chr3L 2659084 2659158 -21884399 - ROO_I LTR Pao -7531 725 652 2 605 184 200 33 0 chr3L 2664180 2664240 -21879317 + (TATG)n Simple_repeat Simple_repeat 3 64 0 2 605 234 91 0 0 chr3L 2668888 2668921 -21874636 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 605 188 35 35 0 chr3L 2672478 2672507 -21871050 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 605 22 0 0 0 chr3L 2672984 2673006 -21870551 + AT_rich Low_complexity Low_complexity 1 22 0 2 605 180 111 0 0 chr3L 2677904 2677931 -21865626 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 605 225 247 32 53 chr3L 2682398 2682492 -21861065 - ROO_I LTR Pao -7525 731 640 2 605 464 278 68 66 chr3L 2684990 2685095 -21858462 + SAR_DM Satellite Satellite 343 682 -790 2 605 713 265 29 20 chr3L 2685095 2685442 -21858115 - XDMR Unknown Unknown -4 357 8 2 605 464 278 68 66 chr3L 2685442 2685605 -21857952 + SAR_DM Satellite Satellite 683 1221 -251 2 605 323 232 102 51 chr3L 2685450 2685627 -21857930 - XDMR Unknown Unknown -2 359 174 2 605 182 91 30 0 chr3L 2688110 2688143 -21855414 + (GAATG)n Simple_repeat Simple_repeat 5 38 0 2 605 241 154 0 58 chr3L 2688725 2688794 -21854763 + T-rich Low_complexity Low_complexity 2 66 0 2 605 25 65 0 0 chr3L 2690476 2690522 -21853035 + AT_rich Low_complexity Low_complexity 1 46 0 2 605 213 94 0 0 chr3L 2691724 2691756 -21851801 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 605 21 36 0 0 chr3L 2694145 2694173 -21849384 + AT_rich Low_complexity Low_complexity 1 28 0 2 605 27 0 0 0 chr3L 2694707 2694734 -21848823 + AT_rich Low_complexity Low_complexity 1 27 0 2 605 25 0 0 0 chr3L 2695341 2695366 -21848191 + AT_rich Low_complexity Low_complexity 1 25 0 2 605 26 0 0 0 chr3L 2696491 2696517 -21847040 + AT_rich Low_complexity Low_complexity 1 26 0 2 605 245 284 0 0 chr3L 2699082 2699149 -21844408 + (CAGC)n Simple_repeat Simple_repeat 3 69 0 2 605 252 0 0 0 chr3L 2700727 2700755 -21842802 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 605 219 69 0 0 chr3L 2704400 2704429 -21839128 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 605 207 184 41 0 chr3L 2705325 2705374 -21838183 + (CAAA)n Simple_repeat Simple_repeat 1 51 0 2 605 21 82 0 0 chr3L 2707045 2707094 -21836463 + AT_rich Low_complexity Low_complexity 1 49 0 2 605 23 0 0 0 chr3L 2708893 2708916 -21834641 + AT_rich Low_complexity Low_complexity 1 23 0 2 605 28 0 0 0 chr3L 2712205 2712233 -21831324 + AT_rich Low_complexity Low_complexity 1 28 0 2 605 186 143 0 0 chr3L 2712908 2712943 -21830614 + (A)n Simple_repeat Simple_repeat 1 35 0 2 605 21 0 0 0 chr3L 2718391 2718412 -21825145 + AT_rich Low_complexity Low_complexity 1 21 0 2 605 186 133 0 0 chr3L 2719141 2719171 -21824386 + (TTCTCC)n Simple_repeat Simple_repeat 3 32 0 2 605 198 0 0 0 chr3L 2719581 2719603 -21823954 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2 605 284 281 0 0 chr3L 2721067 2721149 -21822408 + (CTG)n Simple_repeat Simple_repeat 1 82 0 2 605 325 119 0 35 chr3L 2721608 2721695 -21821862 - ROO_I LTR Pao -7532 724 641 2 605 228 111 0 0 chr3L 2722043 2722079 -21821478 + (CTG)n Simple_repeat Simple_repeat 1 36 0 2 605 229 204 0 0 chr3L 2723415 2723459 -21820098 + (TGG)n Simple_repeat Simple_repeat 2 45 0 2 605 204 40 0 0 chr3L 2725190 2725215 -21818342 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 605 238 208 0 0 chr3L 2728810 2728858 -21814699 + (CTG)n Simple_repeat Simple_repeat 2 49 0 2 605 284 107 0 51 chr3L 2729049 2729108 -21814449 + (CTG)n Simple_repeat Simple_repeat 1 56 0 2 605 243 0 0 0 chr3L 2729896 2729923 -21813634 + (CTG)n Simple_repeat Simple_repeat 1 27 0 2 605 258 132 0 0 chr3L 2732365 2732418 -21811139 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 605 223 229 0 76 chr3L 2732975 2733041 -21810516 + A-rich Low_complexity Low_complexity 1 61 0 2 605 314 210 0 0 chr3L 2735261 2735342 -21808215 - ROO_I LTR Pao -7529 727 647 2 605 23 0 0 0 chr3L 2736617 2736640 -21806917 + AT_rich Low_complexity Low_complexity 1 23 0 2 605 204 97 0 0 chr3L 2736959 2736990 -21806567 + (A)n Simple_repeat Simple_repeat 1 31 0 2 605 230 73 0 24 chr3L 2744780 2744822 -21798735 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 605 180 0 0 0 chr3L 2748489 2748509 -21795048 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 2 605 201 158 0 0 chr3L 2748624 2748662 -21794895 + A-rich Low_complexity Low_complexity 1 38 0 2 605 188 86 0 28 chr3L 2748806 2748842 -21794715 + (TATAG)n Simple_repeat Simple_repeat 3 37 0 2 75 38522 3 0 0 chr3L 2751510 2755712 -21787845 + FW_DM LINE Jockey 492 4692 0 2 606 264 111 0 0 chr3L 2756083 2756128 -21787429 + (T)n Simple_repeat Simple_repeat 1 45 0 2 606 22 35 0 0 chr3L 2757819 2757848 -21785709 + AT_rich Low_complexity Low_complexity 1 29 0 2 606 21 0 0 0 chr3L 2759913 2759934 -21783623 + AT_rich Low_complexity Low_complexity 1 21 0 2 606 28 0 0 0 chr3L 2764008 2764036 -21779521 + AT_rich Low_complexity Low_complexity 1 28 0 2 606 203 171 0 0 chr3L 2765585 2765620 -21777937 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2 606 239 263 0 26 chr3L 2766267 2766290 -21777267 + (TTG)n Simple_repeat Simple_repeat 3 25 0 2 606 189 0 0 0 chr3L 2766290 2766311 -21777246 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 606 239 263 0 26 chr3L 2766311 2766365 -21777192 + (TTG)n Simple_repeat Simple_repeat 1 53 0 2 606 22 0 0 0 chr3L 2772415 2772437 -21771120 + AT_rich Low_complexity Low_complexity 1 22 0 2 606 204 232 0 42 chr3L 2773892 2773964 -21769593 + A-rich Low_complexity Low_complexity 4 72 0 2 606 215 275 25 0 chr3L 2774088 2774168 -21769389 + (TTAAA)n Simple_repeat Simple_repeat 4 85 0 2 606 26 64 0 0 chr3L 2780634 2780681 -21762876 + AT_rich Low_complexity Low_complexity 1 47 0 2 606 30 27 0 0 chr3L 2786607 2786644 -21756913 + AT_rich Low_complexity Low_complexity 1 37 0 2 606 180 0 0 0 chr3L 2787141 2787161 -21756396 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 606 522 83 0 0 chr3L 2789563 2789635 -21753922 + (CTG)n Simple_repeat Simple_repeat 1 72 0 2 606 201 175 0 0 chr3L 2793533 2793573 -21749984 + (CCG)n Simple_repeat Simple_repeat 3 42 0 2 606 254 113 0 88 chr3L 2793849 2793917 -21749640 - ROO_I LTR Pao -7556 700 639 2 606 213 108 0 0 chr3L 2794014 2794051 -21749506 + (CTG)n Simple_repeat Simple_repeat 3 39 0 2 606 183 80 0 0 chr3L 2794158 2794183 -21749374 + (CTG)n Simple_repeat Simple_repeat 3 27 0 2 606 213 121 0 0 chr3L 2794216 2794249 -21749308 + (CTG)n Simple_repeat Simple_repeat 3 35 0 2 606 185 108 0 26 chr3L 2794287 2794325 -21749232 + (CTG)n Simple_repeat Simple_repeat 3 39 0 2 606 336 178 0 0 chr3L 2794443 2794516 -21749041 + (TTG)n Simple_repeat Simple_repeat 1 73 0 2 606 294 95 0 0 chr3L 2794645 2794687 -21748870 + (CTG)n Simple_repeat Simple_repeat 3 44 0 2 606 180 0 0 0 chr3L 2796012 2796032 -21747525 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 606 350 206 0 30 chr3L 2796360 2796460 -21747097 - ROO_I LTR Pao -7517 739 643 2 606 324 83 0 0 chr3L 2796487 2796535 -21747022 + (CTG)n Simple_repeat Simple_repeat 3 50 0 2 606 27 62 0 0 chr3L 2799149 2799197 -21744360 + AT_rich Low_complexity Low_complexity 1 48 0 2 606 180 0 0 0 chr3L 2799307 2799327 -21744230 + (CATA)n Simple_repeat Simple_repeat 4 23 0 2 606 201 39 0 0 chr3L 2800800 2800826 -21742731 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 606 210 273 13 13 chr3L 2801704 2801782 -21741775 + T-rich Low_complexity Low_complexity 3 80 0 2 606 203 108 54 0 chr3L 2803222 2803259 -21740298 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 606 225 273 88 29 chr3L 2803832 2803934 -21739623 - DMRPR Unknown Unknown -42 243 136 2 606 25 0 0 0 chr3L 2805316 2805341 -21738216 + AT_rich Low_complexity Low_complexity 1 25 0 2 606 246 175 18 0 chr3L 2805505 2805562 -21737995 - ROO_I LTR Pao -7522 734 677 2 606 263 200 85 24 chr3L 2805515 2805597 -21737960 - TART LINE telomeric -8153 6324 6238 2 606 21 0 0 0 chr3L 2806301 2806322 -21737235 + AT_rich Low_complexity Low_complexity 1 21 0 2 606 226 325 0 0 chr3L 2808342 2808425 -21735132 + GA-rich Low_complexity Low_complexity 1 83 0 2 606 186 118 0 0 chr3L 2808560 2808594 -21734963 + (A)n Simple_repeat Simple_repeat 1 34 0 2 606 222 209 0 0 chr3L 2812993 2813036 -21730521 + GA-rich Low_complexity Low_complexity 2 44 0 2 606 21 36 0 0 chr3L 2815496 2815524 -21728033 + AT_rich Low_complexity Low_complexity 1 28 0 2 606 189 121 0 0 chr3L 2820707 2820740 -21722817 + (CTG)n Simple_repeat Simple_repeat 3 35 0 2 606 29 0 0 0 chr3L 2822642 2822671 -21720886 + AT_rich Low_complexity Low_complexity 1 29 0 2 606 203 284 15 0 chr3L 2823699 2823766 -21719791 + CT-rich Low_complexity Low_complexity 2 69 0 2 606 214 254 16 0 chr3L 2824366 2824429 -21719128 + (CTG)n Simple_repeat Simple_repeat 3 66 0 2 606 211 209 0 0 chr3L 2827409 2827452 -21716105 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 606 200 189 0 0 chr3L 2828436 2828473 -21715084 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 606 207 0 0 0 chr3L 2828833 2828856 -21714701 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 606 24 32 0 0 chr3L 2830146 2830177 -21713380 + AT_rich Low_complexity Low_complexity 1 31 0 2 606 186 118 0 0 chr3L 2830350 2830384 -21713173 + (CAAT)n Simple_repeat Simple_repeat 3 36 0 2 606 23 0 0 0 chr3L 2832128 2832151 -21711406 + AT_rich Low_complexity Low_complexity 1 23 0 2 606 21 36 0 0 chr3L 2832327 2832355 -21711202 + AT_rich Low_complexity Low_complexity 1 28 0 2 606 189 121 0 0 chr3L 2832406 2832439 -21711118 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 606 186 143 0 0 chr3L 2833306 2833341 -21710216 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 606 186 133 0 0 chr3L 2834969 2834999 -21708558 + (CAA)n Simple_repeat Simple_repeat 1 30 0 2 606 25 0 0 0 chr3L 2835068 2835093 -21708464 + AT_rich Low_complexity Low_complexity 1 25 0 2 606 31 58 0 0 chr3L 2835144 2835196 -21708361 + AT_rich Low_complexity Low_complexity 1 52 0 2 606 50 18 0 0 chr3L 2835246 2835303 -21708254 + AT_rich Low_complexity Low_complexity 1 57 0 2 606 21 0 0 0 chr3L 2836436 2836457 -21707100 + AT_rich Low_complexity Low_complexity 1 21 0 2 606 312 108 40 26 chr3L 2837413 2837489 -21706068 + T-rich Low_complexity Low_complexity 4 80 0 2 606 186 71 0 0 chr3L 2837701 2837729 -21705828 + (GGAAA)n Simple_repeat Simple_repeat 3 30 0 2 606 22 0 0 0 chr3L 2838454 2838476 -21705081 + AT_rich Low_complexity Low_complexity 1 22 0 2 606 204 135 0 0 chr3L 2838628 2838665 -21704892 + (TTG)n Simple_repeat Simple_repeat 1 37 0 2 606 273 276 0 0 chr3L 2839585 2839661 -21703896 + (TTG)n Simple_repeat Simple_repeat 3 78 0 2 606 24 32 0 0 chr3L 2841312 2841343 -21702214 + AT_rich Low_complexity Low_complexity 1 31 0 2 606 21 36 0 0 chr3L 2842401 2842429 -21701128 + AT_rich Low_complexity Low_complexity 1 28 0 2 606 216 111 0 0 chr3L 2842507 2842543 -21701014 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 2 606 31 0 0 0 chr3L 2842603 2842634 -21700923 + AT_rich Low_complexity Low_complexity 1 31 0 2 606 213 39 0 0 chr3L 2843406 2843432 -21700125 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2 606 228 67 0 0 chr3L 2844472 2844502 -21699055 + (GA)n Simple_repeat Simple_repeat 2 31 0 2 606 210 91 0 0 chr3L 2845094 2845127 -21698430 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 606 23 0 0 0 chr3L 2846650 2846673 -21696884 + AT_rich Low_complexity Low_complexity 1 23 0 2 606 217 226 19 0 chr3L 2847548 2847601 -21695956 + (CTG)n Simple_repeat Simple_repeat 3 56 0 2 606 225 191 0 42 chr3L 2847777 2847848 -21695709 - ROO_I LTR Pao -7524 732 665 2 606 26 30 0 0 chr3L 2849051 2849084 -21694473 + AT_rich Low_complexity Low_complexity 1 33 0 2 606 22 0 0 0 chr3L 2851718 2851740 -21691817 + AT_rich Low_complexity Low_complexity 1 22 0 2 606 226 238 32 0 chr3L 2857824 2857887 -21685670 + (CAG)n Simple_repeat Simple_repeat 3 67 0 2 606 26 0 0 0 chr3L 2858299 2858325 -21685232 + AT_rich Low_complexity Low_complexity 1 26 0 2 606 180 111 0 0 chr3L 2859586 2859613 -21683944 + (TTG)n Simple_repeat Simple_repeat 3 29 0 2 606 28 0 0 0 chr3L 2864911 2864939 -21678618 + AT_rich Low_complexity Low_complexity 1 28 0 2 606 239 255 0 0 chr3L 2865521 2865572 -21677985 + (CAT)n Simple_repeat Simple_repeat 1 51 0 2 606 226 279 13 0 chr3L 2867759 2867838 -21675719 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 606 261 243 0 51 chr3L 2869628 2869745 -21673812 + (TGG)n Simple_repeat Simple_repeat 3 113 0 2 606 285 197 0 0 chr3L 2871251 2871312 -21672245 + (TTG)n Simple_repeat Simple_repeat 1 61 0 2 606 356 165 18 55 chr3L 2871324 2871433 -21672124 - ROO_I LTR Pao -7513 743 639 2 606 228 197 0 40 chr3L 2871433 2871507 -21672050 - ROO_I LTR Pao -7549 707 637 2 606 27 0 0 0 chr3L 2872981 2873008 -21670549 + AT_rich Low_complexity Low_complexity 1 27 0 2 606 231 219 0 15 chr3L 2873147 2873212 -21670345 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 606 21 36 0 0 chr3L 2873292 2873320 -21670237 + AT_rich Low_complexity Low_complexity 1 28 0 2 606 212 192 0 19 chr3L 2873463 2873516 -21670041 + (ATG)n Simple_repeat Simple_repeat 1 52 0 2 606 183 80 0 0 chr3L 2875358 2875383 -21668174 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 606 21 36 0 0 chr3L 2877898 2877926 -21665631 + AT_rich Low_complexity Low_complexity 1 28 0 2 606 207 69 0 0 chr3L 2879640 2879669 -21663888 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 606 228 206 48 0 chr3L 2880039 2880102 -21663455 + (CTG)n Simple_repeat Simple_repeat 1 66 0 2 606 189 0 0 0 chr3L 2880955 2880976 -21662581 + (A)n Simple_repeat Simple_repeat 1 21 0 2 606 209 214 0 67 chr3L 2881755 2881815 -21661742 + (CTG)n Simple_repeat Simple_repeat 3 58 0 2 606 180 125 0 0 chr3L 2881949 2881981 -21661576 + (TTG)n Simple_repeat Simple_repeat 1 32 0 2 607 26 0 0 0 chr3L 2884645 2884671 -21658886 + AT_rich Low_complexity Low_complexity 1 26 0 2 607 22 70 0 0 chr3L 2885660 2885703 -21657854 + AT_rich Low_complexity Low_complexity 1 43 0 2 607 27 87 0 0 chr3L 2886953 2887022 -21656535 + AT_rich Low_complexity Low_complexity 1 69 0 2 607 22 0 0 0 chr3L 2887105 2887127 -21656430 + AT_rich Low_complexity Low_complexity 1 22 0 2 607 25 65 0 0 chr3L 2890064 2890110 -21653447 + AT_rich Low_complexity Low_complexity 1 46 0 2 607 212 200 18 0 chr3L 2890444 2890499 -21653058 + (TAA)n Simple_repeat Simple_repeat 2 57 0 2 607 21 36 0 0 chr3L 2891548 2891576 -21651981 + AT_rich Low_complexity Low_complexity 1 28 0 2 607 24 53 0 0 chr3L 2892997 2893035 -21650522 + AT_rich Low_complexity Low_complexity 1 38 0 2 607 26 50 0 0 chr3L 2894127 2894167 -21649390 + AT_rich Low_complexity Low_complexity 1 40 0 2 607 201 121 0 0 chr3L 2895917 2895950 -21647607 + (CTCTG)n Simple_repeat Simple_repeat 2 34 0 2 607 198 0 0 0 chr3L 2903109 2903131 -21640426 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 607 27 0 0 0 chr3L 2909397 2909424 -21634133 + AT_rich Low_complexity Low_complexity 1 27 0 2 607 206 154 0 25 chr3L 2913860 2913900 -21629657 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 607 23 54 0 0 chr3L 2914056 2914093 -21629464 + AT_rich Low_complexity Low_complexity 1 37 0 2 607 21 36 0 0 chr3L 2919452 2919480 -21624077 + AT_rich Low_complexity Low_complexity 1 28 0 2 607 186 43 0 0 chr3L 2922029 2922052 -21621505 + (A)n Simple_repeat Simple_repeat 1 23 0 2 607 22 70 0 0 chr3L 2923340 2923383 -21620174 + AT_rich Low_complexity Low_complexity 1 43 0 2 607 247 142 0 154 chr3L 2924206 2924323 -21619234 + ROO_I LTR Pao 640 738 -7518 2 607 24 32 0 0 chr3L 2925615 2925646 -21617911 + AT_rich Low_complexity Low_complexity 1 31 0 2 607 25 0 0 0 chr3L 2927136 2927161 -21616396 + AT_rich Low_complexity Low_complexity 1 25 0 2 607 28 29 0 0 chr3L 2927446 2927481 -21616076 + AT_rich Low_complexity Low_complexity 1 35 0 2 607 3790 5 0 0 chr3L 2927893 2928310 -21615247 - TIRANT_LTR LTR Gypsy 0 417 1 2 607 66311 1 0 1 chr3L 2928310 2935696 -21607861 - TIRANT_I LTR Gypsy 0 7692 1 2 607 3790 5 0 0 chr3L 2935696 2936113 -21607444 - TIRANT_LTR LTR Gypsy 0 417 1 2 607 237 228 18 0 chr3L 2936475 2936532 -21607025 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 607 22 56 0 0 chr3L 2937253 2937289 -21606268 + AT_rich Low_complexity Low_complexity 1 36 0 2 607 229 182 0 0 chr3L 2939010 2939054 -21604503 + CT-rich Low_complexity Low_complexity 2 45 0 2 607 23 33 0 0 chr3L 2943618 2943648 -21599909 + AT_rich Low_complexity Low_complexity 1 30 0 2 607 210 196 18 18 chr3L 2944364 2944421 -21599136 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 607 214 250 0 15 chr3L 2944623 2944688 -21598869 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 607 22 0 0 0 chr3L 2946886 2946908 -21596649 + AT_rich Low_complexity Low_complexity 1 22 0 2 607 189 107 0 0 chr3L 2948597 2948625 -21594932 + (CAG)n Simple_repeat Simple_repeat 3 30 0 2 607 25 31 0 0 chr3L 2949027 2949059 -21594498 + AT_rich Low_complexity Low_complexity 1 32 0 2 607 246 125 0 0 chr3L 2952883 2952931 -21590626 + (TTTCG)n Simple_repeat Simple_repeat 3 50 0 2 607 27 29 0 0 chr3L 2953406 2953440 -21590117 + AT_rich Low_complexity Low_complexity 1 34 0 2 607 225 0 0 0 chr3L 2957618 2957643 -21585914 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 607 203 247 22 22 chr3L 2958652 2958743 -21584814 + (TTAG)n Simple_repeat Simple_repeat 3 93 0 2 607 234 62 0 0 chr3L 2959050 2959082 -21584475 + (CTCA)n Simple_repeat Simple_repeat 2 33 0 2 607 22 0 0 0 chr3L 2959633 2959655 -21583902 + AT_rich Low_complexity Low_complexity 1 22 0 2 607 23 33 0 0 chr3L 2962515 2962545 -21581012 + AT_rich Low_complexity Low_complexity 1 30 0 2 607 26 30 0 0 chr3L 2963730 2963763 -21579794 + AT_rich Low_complexity Low_complexity 1 33 0 2 607 3013 44 5 30 chr3L 2966753 2966793 -21576764 + MDG1_LTR LTR Gypsy 55 87 -355 2 607 423 100 0 0 chr3L 2966793 2966863 -21576694 + (TAA)n Simple_repeat Simple_repeat 3 72 0 2 607 3013 44 5 30 chr3L 2966863 2967220 -21576337 + MDG1_LTR LTR Gypsy 88 442 0 2 607 57286 7 19 2 chr3L 2967220 2973713 -21569844 + MDG1_I LTR Gypsy 1 6799 -98 2 607 423 100 0 0 chr3L 2973717 2973787 -21569770 + (TAA)n Simple_repeat Simple_repeat 3 72 0 2 607 3018 36 0 3 chr3L 2973787 2974144 -21569413 + MDG1_LTR LTR Gypsy 87 442 0 2 607 207 170 0 0 chr3L 2974638 2974685 -21568872 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 607 21 0 0 0 chr3L 2977861 2977882 -21565675 + AT_rich Low_complexity Low_complexity 1 21 0 2 607 24 0 0 0 chr3L 2979725 2979749 -21563808 + AT_rich Low_complexity Low_complexity 1 24 0 2 607 204 67 0 0 chr3L 2988387 2988417 -21555140 + (TGG)n Simple_repeat Simple_repeat 3 32 0 2 607 22 0 0 0 chr3L 2988985 2989007 -21554550 + AT_rich Low_complexity Low_complexity 1 22 0 2 607 218 125 25 0 chr3L 2989335 2989375 -21554182 + (CATA)n Simple_repeat Simple_repeat 4 44 0 2 607 189 0 0 0 chr3L 2997110 2997131 -21546426 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 2 607 27 29 0 0 chr3L 3001065 3001099 -21542458 + AT_rich Low_complexity Low_complexity 1 34 0 2 607 32 0 0 0 chr3L 3001954 3001986 -21541571 + AT_rich Low_complexity Low_complexity 1 32 0 2 607 225 267 0 0 chr3L 3004079 3004124 -21539433 - DMRT1C LINE R1 -1730 3713 3669 2 607 21 0 0 0 chr3L 3004226 3004247 -21539310 + AT_rich Low_complexity Low_complexity 1 21 0 2 607 21 36 0 0 chr3L 3004704 3004732 -21538825 + AT_rich Low_complexity Low_complexity 1 28 0 2 607 26 30 0 0 chr3L 3007000 3007033 -21536524 + AT_rich Low_complexity Low_complexity 1 33 0 2 607 25 0 0 0 chr3L 3007701 3007726 -21535831 + AT_rich Low_complexity Low_complexity 1 25 0 2 607 22 35 0 0 chr3L 3007757 3007786 -21535771 + AT_rich Low_complexity Low_complexity 1 29 0 2 607 21 0 0 0 chr3L 3010579 3010600 -21532957 + AT_rich Low_complexity Low_complexity 1 21 0 2 608 211 194 0 0 chr3L 3014817 3014853 -21528704 + (CGA)n Simple_repeat Simple_repeat 1 36 0 2 608 242 290 10 31 chr3L 3021875 3021971 -21521586 + T-rich Low_complexity Low_complexity 5 98 0 2 608 23 0 0 0 chr3L 3022333 3022356 -21521201 + AT_rich Low_complexity Low_complexity 1 23 0 2 608 218 179 0 0 chr3L 3026017 3026056 -21517501 + CT-rich Low_complexity Low_complexity 1 39 0 2 608 198 0 0 0 chr3L 3027250 3027272 -21516285 + (TTAAA)n Simple_repeat Simple_repeat 2 23 0 2 608 23 33 0 0 chr3L 3030233 3030263 -21513294 + AT_rich Low_complexity Low_complexity 1 30 0 2 608 21 0 0 0 chr3L 3031721 3031742 -21511815 + AT_rich Low_complexity Low_complexity 1 21 0 2 608 235 233 27 0 chr3L 3035426 3035499 -21508058 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 608 186 103 0 0 chr3L 3037369 3037398 -21506159 + (CACTT)n Simple_repeat Simple_repeat 5 33 0 2 608 277 240 38 19 chr3L 3037830 3037936 -21505621 + ROO_I LTR Pao 642 749 -7507 2 608 288 239 0 33 chr3L 3038238 3038329 -21505228 + ROO_I LTR Pao 656 743 -7513 2 608 12550 90 3 2 chr3L 3040377 3042111 -21501446 - S_DM DNA Tc1 0 1736 1 2 608 21 57 0 0 chr3L 3050204 3050239 -21493318 + AT_rich Low_complexity Low_complexity 1 35 0 2 608 180 0 0 0 chr3L 3051778 3051798 -21491759 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 608 1377 60 16 0 chr3L 3051801 3051984 -21491573 + POGON1 DNA Pogo 1 186 0 2 608 209 200 0 0 chr3L 3060357 3060397 -21483160 + (CAGA)n Simple_repeat Simple_repeat 4 43 0 2 608 3799 5 0 0 chr3L 3061338 3061755 -21481802 + TIRANT_LTR LTR Gypsy 1 417 0 2 608 71179 0 0 0 chr3L 3061755 3069447 -21474110 + TIRANT_I LTR Gypsy 1 7692 0 2 608 3799 5 0 0 chr3L 3069447 3069864 -21473693 + TIRANT_LTR LTR Gypsy 1 417 0 2 608 204 208 0 0 chr3L 3070396 3070444 -21473113 + GA-rich Low_complexity Low_complexity 2 49 0 2 608 22 35 0 0 chr3L 3070979 3071008 -21472549 + AT_rich Low_complexity Low_complexity 1 29 0 2 608 27 49 0 0 chr3L 3071640 3071681 -21471876 + AT_rich Low_complexity Low_complexity 1 41 0 2 608 207 260 25 38 chr3L 3071794 3071874 -21471683 + CT-rich Low_complexity Low_complexity 6 84 0 2 608 202 179 35 35 chr3L 3073342 3073400 -21470157 + (CGAAA)n Simple_repeat Simple_repeat 3 60 0 2 608 22 35 0 0 chr3L 3076483 3076512 -21467045 + AT_rich Low_complexity Low_complexity 1 29 0 2 608 21 0 0 0 chr3L 3080281 3080302 -21463255 + AT_rich Low_complexity Low_complexity 1 21 0 2 608 234 91 0 0 chr3L 3080742 3080775 -21462782 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 2 608 222 191 0 0 chr3L 3081883 3081930 -21461627 + (TATG)n Simple_repeat Simple_repeat 2 48 0 2 608 23 33 0 0 chr3L 3084089 3084119 -21459438 + AT_rich Low_complexity Low_complexity 1 30 0 2 608 228 137 0 0 chr3L 3085324 3085375 -21458182 + (CAG)n Simple_repeat Simple_repeat 1 51 0 2 608 360 268 0 40 chr3L 3088634 3088782 -21454775 + A-rich Low_complexity Low_complexity 1 142 0 2 608 31 0 0 0 chr3L 3090407 3090438 -21453119 + AT_rich Low_complexity Low_complexity 1 31 0 2 608 27 0 0 0 chr3L 3090922 3090949 -21452608 + AT_rich Low_complexity Low_complexity 1 27 0 2 608 24 67 0 0 chr3L 3094892 3094937 -21448620 + AT_rich Low_complexity Low_complexity 1 45 0 2 608 21 0 0 0 chr3L 3099760 3099781 -21443776 + AT_rich Low_complexity Low_complexity 1 21 0 2 608 200 94 31 0 chr3L 3100789 3100821 -21442736 + (CAGCG)n Simple_repeat Simple_repeat 3 35 0 2 608 25 0 0 0 chr3L 3106104 3106129 -21437428 + AT_rich Low_complexity Low_complexity 1 25 0 2 608 226 159 0 22 chr3L 3106746 3106791 -21436766 + (GATTG)n Simple_repeat Simple_repeat 1 44 0 2 608 28 0 0 0 chr3L 3122516 3122544 -21421013 + AT_rich Low_complexity Low_complexity 1 28 0 2 608 22 0 0 0 chr3L 3123990 3124012 -21419545 + AT_rich Low_complexity Low_complexity 1 22 0 2 608 264 100 0 0 chr3L 3127418 3127458 -21416099 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 608 192 167 0 0 chr3L 3128508 3128556 -21415001 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 608 36 0 0 0 chr3L 3134431 3134467 -21409090 + AT_rich Low_complexity Low_complexity 1 36 0 2 608 26 93 0 0 chr3L 3134944 3135019 -21408538 + AT_rich Low_complexity Low_complexity 1 75 0 2 608 195 100 0 0 chr3L 3138857 3138887 -21404670 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 2 608 214 189 0 75 chr3L 3139298 3139378 -21404179 + T-rich Low_complexity Low_complexity 2 75 0 2 608 21 36 0 0 chr3L 3140200 3140228 -21403329 + AT_rich Low_complexity Low_complexity 1 28 0 2 608 207 0 0 0 chr3L 3140383 3140406 -21403151 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 2 608 32 26 0 0 chr3L 3143655 3143694 -21399863 + AT_rich Low_complexity Low_complexity 1 39 0 2 608 21 57 0 0 chr3L 3143746 3143781 -21399776 + AT_rich Low_complexity Low_complexity 1 35 0 2 608 23 33 0 0 chr3L 3143849 3143879 -21399678 + AT_rich Low_complexity Low_complexity 1 30 0 2 609 239 224 0 0 chr3L 3149862 3149911 -21393646 + GA-rich Low_complexity Low_complexity 2 50 0 2 609 316 235 0 0 chr3L 3150594 3150696 -21392861 + ROO_I LTR Pao 640 741 -7515 2 609 225 367 0 11 chr3L 3152525 3152616 -21390941 + (CGG)n Simple_repeat Simple_repeat 2 91 0 2 609 244 181 42 0 chr3L 3152623 3152695 -21390862 + ROO_I LTR Pao 640 714 -7542 2 609 180 77 0 0 chr3L 3153904 3153930 -21389627 + (AGCTG)n Simple_repeat Simple_repeat 3 28 0 2 609 225 108 0 0 chr3L 3154114 3154151 -21389406 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 609 21 0 0 0 chr3L 3154186 3154207 -21389350 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 205 258 0 16 chr3L 3154756 3154819 -21388738 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 2 609 27 0 0 0 chr3L 3155578 3155605 -21387952 + AT_rich Low_complexity Low_complexity 1 27 0 2 609 22 0 0 0 chr3L 3159729 3159751 -21383806 + AT_rich Low_complexity Low_complexity 1 22 0 2 609 22 0 0 0 chr3L 3159763 3159785 -21383772 + AT_rich Low_complexity Low_complexity 1 22 0 2 609 24 85 0 0 chr3L 3163797 3163856 -21379701 + AT_rich Low_complexity Low_complexity 1 59 0 2 609 25 31 0 0 chr3L 3169196 3169228 -21374329 + AT_rich Low_complexity Low_complexity 1 32 0 2 609 21 0 0 0 chr3L 3183611 3183632 -21359925 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 212 357 0 0 chr3L 3185739 3185865 -21357692 + (CCA)n Simple_repeat Simple_repeat 3 128 0 2 609 230 282 0 0 chr3L 3186138 3186209 -21357348 + (CCA)n Simple_repeat Simple_repeat 3 73 0 2 609 25 0 0 0 chr3L 3186928 3186953 -21356604 + AT_rich Low_complexity Low_complexity 1 25 0 2 609 21 0 0 0 chr3L 3192815 3192836 -21350721 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 32 26 0 0 chr3L 3194216 3194255 -21349302 + AT_rich Low_complexity Low_complexity 1 39 0 2 609 212 371 0 0 chr3L 3195128 3195287 -21348270 + GA-rich Low_complexity Low_complexity 2 160 0 2 609 229 178 67 0 chr3L 3200579 3200624 -21342933 + Gypsy9_LTR LTR Gypsy 44 91 -245 2 609 22 0 0 0 chr3L 3203251 3203273 -21340284 + AT_rich Low_complexity Low_complexity 1 22 0 2 609 24 0 0 0 chr3L 3205479 3205503 -21338054 + AT_rich Low_complexity Low_complexity 1 24 0 2 609 21 57 0 0 chr3L 3224623 3224658 -21318899 + AT_rich Low_complexity Low_complexity 1 35 0 2 609 258 256 0 53 chr3L 3225913 3226008 -21317549 + A-rich Low_complexity Low_complexity 2 91 0 2 609 242 295 0 0 chr3L 3226240 3226318 -21317239 + (CTCG)n Simple_repeat Simple_repeat 4 81 0 2 609 200 138 15 44 chr3L 3226332 3226400 -21317157 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 609 232 312 8 0 chr3L 3227002 3227163 -21316394 + (CAG)n Simple_repeat Simple_repeat 1 162 0 2 609 180 111 0 0 chr3L 3227211 3227238 -21316319 + (CAG)n Simple_repeat Simple_repeat 1 27 0 2 609 249 231 0 37 chr3L 3229503 3229584 -21313973 + (CAG)n Simple_repeat Simple_repeat 1 78 0 2 609 306 132 0 0 chr3L 3230424 3230477 -21313080 + (CAG)n Simple_repeat Simple_repeat 1 53 0 2 609 28 48 0 0 chr3L 3232944 3232986 -21310571 + AT_rich Low_complexity Low_complexity 1 42 0 2 609 180 77 0 0 chr3L 3234417 3234443 -21309114 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 2 609 218 56 28 0 chr3L 3235829 3235865 -21307692 + (CAA)n Simple_repeat Simple_repeat 2 38 0 2 609 189 74 0 0 chr3L 3235942 3235969 -21307588 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 609 269 205 12 35 chr3L 3236136 3236222 -21307335 + A-rich Low_complexity Low_complexity 1 84 0 2 609 63 14 0 0 chr3L 3240980 3241050 -21302507 + AT_rich Low_complexity Low_complexity 1 70 0 2 609 250 194 0 16 chr3L 3246476 3246539 -21297018 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 2 609 220 266 0 12 chr3L 3246646 3246726 -21296831 + CT-rich Low_complexity Low_complexity 1 79 0 2 609 189 171 0 0 chr3L 3249466 3249501 -21294056 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 609 25 0 0 0 chr3L 3252116 3252141 -21291416 + AT_rich Low_complexity Low_complexity 1 25 0 2 609 207 0 0 0 chr3L 3254319 3254342 -21289215 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 609 306 87 0 0 chr3L 3258293 3258339 -21285218 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 609 195 114 0 0 chr3L 3261179 3261214 -21282343 + (TAAAAA)n Simple_repeat Simple_repeat 3 37 0 2 609 21 0 0 0 chr3L 3262636 3262657 -21280900 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 198 0 0 0 chr3L 3267306 3267328 -21276229 + (TC)n Simple_repeat Simple_repeat 1 22 0 2 609 24 0 0 0 chr3L 3268587 3268611 -21274946 + AT_rich Low_complexity Low_complexity 1 24 0 2 609 28 29 0 0 chr3L 3268951 3268986 -21274571 + AT_rich Low_complexity Low_complexity 1 35 0 2 609 201 74 0 0 chr3L 3270080 3270107 -21273450 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 609 253 260 14 0 chr3L 3274193 3274266 -21269291 + (CGA)n Simple_repeat Simple_repeat 1 74 0 2 609 25 51 0 0 chr3L 3275427 3275466 -21268091 + AT_rich Low_complexity Low_complexity 1 39 0 2 610 29 47 0 0 chr3L 3276965 3277008 -21266549 + AT_rich Low_complexity Low_complexity 1 43 0 2 610 25 0 0 0 chr3L 3279757 3279782 -21263775 + AT_rich Low_complexity Low_complexity 1 25 0 2 610 3802 5 0 0 chr3L 3281500 3281930 -21261627 + DOC LINE Jockey 4296 4725 0 2 610 27 0 0 0 chr3L 3285078 3285105 -21258452 + AT_rich Low_complexity Low_complexity 1 27 0 2 610 305 263 0 0 chr3L 3287245 3287425 -21256132 + GA-rich Low_complexity Low_complexity 1 180 0 2 610 25 31 0 0 chr3L 3288458 3288490 -21255067 + AT_rich Low_complexity Low_complexity 1 32 0 2 610 189 0 0 0 chr3L 3288993 3289014 -21254543 + (GAA)n Simple_repeat Simple_repeat 2 22 0 2 610 222 191 0 0 chr3L 3295713 3295755 -21247802 + (ATTCG)n Simple_repeat Simple_repeat 3 44 0 2 610 21 0 0 0 chr3L 3298834 3298855 -21244702 + AT_rich Low_complexity Low_complexity 1 21 0 2 610 31 26 0 0 chr3L 3298968 3299006 -21244551 + AT_rich Low_complexity Low_complexity 1 38 0 2 610 23 0 0 0 chr3L 3303740 3303763 -21239794 + AT_rich Low_complexity Low_complexity 1 23 0 2 610 207 69 0 0 chr3L 3308104 3308133 -21235424 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 610 25 0 0 0 chr3L 3309379 3309404 -21234153 + AT_rich Low_complexity Low_complexity 1 25 0 2 610 26 0 0 0 chr3L 3317111 3317137 -21226420 + AT_rich Low_complexity Low_complexity 1 26 0 2 610 224 260 0 0 chr3L 3321170 3321247 -21222310 + (CAG)n Simple_repeat Simple_repeat 1 77 0 2 610 227 171 0 0 chr3L 3321185 3321226 -21222331 + (CCA)n Simple_repeat Simple_repeat 1 41 0 2 610 30 0 0 0 chr3L 3322579 3322609 -21220948 + AT_rich Low_complexity Low_complexity 1 30 0 2 610 238 308 0 0 chr3L 3330330 3330421 -21213136 + (CAG)n Simple_repeat Simple_repeat 1 91 0 2 610 22 0 0 0 chr3L 3335482 3335504 -21208053 + AT_rich Low_complexity Low_complexity 1 22 0 2 610 220 174 0 42 chr3L 3337445 3337493 -21206064 + CT-rich Low_complexity Low_complexity 3 48 0 2 610 22 0 0 0 chr3L 3340915 3340937 -21202620 + AT_rich Low_complexity Low_complexity 1 22 0 2 610 24 0 0 0 chr3L 3343294 3343318 -21200239 + AT_rich Low_complexity Low_complexity 1 24 0 2 610 194 33 0 62 chr3L 3352757 3352789 -21190768 + (CATTT)n Simple_repeat Simple_repeat 1 30 0 2 610 21 36 0 0 chr3L 3353119 3353147 -21190410 + AT_rich Low_complexity Low_complexity 1 28 0 2 610 210 167 0 0 chr3L 3365957 3365993 -21177564 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2 610 21 36 0 0 chr3L 3367991 3368019 -21175538 + AT_rich Low_complexity Low_complexity 1 28 0 2 610 22 0 0 0 chr3L 3368223 3368245 -21175312 + AT_rich Low_complexity Low_complexity 1 22 0 2 610 26 0 0 0 chr3L 3368870 3368896 -21174661 + AT_rich Low_complexity Low_complexity 1 26 0 2 610 188 34 0 33 chr3L 3371171 3371201 -21172356 + (TTG)n Simple_repeat Simple_repeat 1 29 0 2 610 27 0 0 0 chr3L 3377664 3377691 -21165866 + AT_rich Low_complexity Low_complexity 1 27 0 2 610 24 0 0 0 chr3L 3379829 3379853 -21163704 + AT_rich Low_complexity Low_complexity 1 24 0 2 610 24 0 0 0 chr3L 3382120 3382144 -21161413 + AT_rich Low_complexity Low_complexity 1 24 0 2 610 225 0 0 0 chr3L 3382353 3382378 -21161179 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2 610 24 32 0 0 chr3L 3384743 3384774 -21158783 + AT_rich Low_complexity Low_complexity 1 31 0 2 610 200 176 0 0 chr3L 3386849 3386883 -21156674 + (CCG)n Simple_repeat Simple_repeat 1 34 0 2 610 183 114 0 0 chr3L 3386896 3386931 -21156626 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 2 610 366 61 0 0 chr3L 3387004 3387053 -21156504 + (GTATG)n Simple_repeat Simple_repeat 5 53 0 2 610 378 147 0 0 chr3L 3387760 3387828 -21155729 + (CAA)n Simple_repeat Simple_repeat 3 70 0 2 610 183 100 0 0 chr3L 3388054 3388084 -21155473 + (T)n Simple_repeat Simple_repeat 1 30 0 2 610 210 240 0 0 chr3L 3391363 3391413 -21152144 + (ATG)n Simple_repeat Simple_repeat 2 51 0 2 610 307 206 10 30 chr3L 3393904 3394004 -21149553 - ROO_I LTR Pao -7513 743 646 2 610 306 138 0 0 chr3L 3394121 3394179 -21149378 + (TTG)n Simple_repeat Simple_repeat 2 59 0 2 610 596 191 0 6 chr3L 3394324 3394498 -21149059 + (CAA)n Simple_repeat Simple_repeat 1 173 0 2 610 244 204 0 0 chr3L 3397736 3397785 -21145772 + GA-rich Low_complexity Low_complexity 3 51 0 2 610 208 246 16 0 chr3L 3399408 3399469 -21144088 + (CTA)n Simple_repeat Simple_repeat 1 62 0 2 610 211 229 0 20 chr3L 3399918 3399967 -21143590 + (CATA)n Simple_repeat Simple_repeat 4 51 0 2 610 22 56 0 0 chr3L 3401140 3401176 -21142381 + AT_rich Low_complexity Low_complexity 1 36 0 2 610 229 209 14 29 chr3L 3401583 3401652 -21141905 + (TA)n Simple_repeat Simple_repeat 1 68 0 2 610 30 45 0 0 chr3L 3402725 3402769 -21140788 + AT_rich Low_complexity Low_complexity 1 44 0 2 610 188 67 33 0 chr3L 3402796 3402826 -21140731 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2 610 426 136 0 0 chr3L 3403922 3404003 -21139554 + (CTG)n Simple_repeat Simple_repeat 3 83 0 2 610 276 111 0 0 chr3L 3404239 3404284 -21139273 + (TTG)n Simple_repeat Simple_repeat 2 46 0 2 610 195 69 0 0 chr3L 3405480 3405509 -21138048 + (TTA)n Simple_repeat Simple_repeat 2 30 0 2 610 195 114 0 0 chr3L 3405676 3405711 -21137846 + (T)n Simple_repeat Simple_repeat 1 35 0 2 610 26 74 0 0 chr3L 3407309 3407363 -21136194 + AT_rich Low_complexity Low_complexity 1 54 0 2 610 219 143 48 0 chr3L 3407798 3407840 -21135717 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 2 611 291 85 0 0 chr3L 3408967 3409014 -21134543 + (CAG)n Simple_repeat Simple_repeat 3 49 0 2 611 191 62 0 59 chr3L 3409733 3409767 -21133790 + (GTCTG)n Simple_repeat Simple_repeat 2 33 0 2 611 226 319 0 0 chr3L 3411609 3411722 -21131835 + (CA)n Simple_repeat Simple_repeat 2 114 0 2 611 22 0 0 0 chr3L 3412325 3412347 -21131210 + AT_rich Low_complexity Low_complexity 1 22 0 2 611 221 143 0 39 chr3L 3413015 3413066 -21130491 + (CAT)n Simple_repeat Simple_repeat 1 49 0 2 611 30 27 0 0 chr3L 3413855 3413892 -21129665 + AT_rich Low_complexity Low_complexity 1 37 0 2 611 246 148 0 0 chr3L 3413976 3414030 -21129527 + (TTTTTG)n Simple_repeat Simple_repeat 4 57 0 2 611 231 146 0 0 chr3L 3414823 3414864 -21128693 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 2 611 242 188 43 0 chr3L 3415803 3415872 -21127685 + (CGAAT)n Simple_repeat Simple_repeat 4 75 0 2 611 24 32 0 0 chr3L 3416149 3416180 -21127377 + AT_rich Low_complexity Low_complexity 1 31 0 2 611 21 0 0 0 chr3L 3416219 3416240 -21127317 + AT_rich Low_complexity Low_complexity 1 21 0 2 611 29 0 0 0 chr3L 3416341 3416370 -21127187 + AT_rich Low_complexity Low_complexity 1 29 0 2 611 204 250 15 15 chr3L 3417316 3417381 -21126176 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 611 25 83 0 0 chr3L 3417393 3417453 -21126104 + AT_rich Low_complexity Low_complexity 1 60 0 2 611 24 0 0 0 chr3L 3417495 3417519 -21126038 + AT_rich Low_complexity Low_complexity 1 24 0 2 611 22 88 0 0 chr3L 3419362 3419419 -21124138 + AT_rich Low_complexity Low_complexity 1 57 0 2 611 192 77 0 0 chr3L 3420471 3420497 -21123060 + (CTTCG)n Simple_repeat Simple_repeat 1 26 0 2 611 26 0 0 0 chr3L 3421798 3421824 -21121733 + AT_rich Low_complexity Low_complexity 1 26 0 2 611 27 29 0 0 chr3L 3422282 3422316 -21121241 + AT_rich Low_complexity Low_complexity 1 34 0 2 611 23 54 0 0 chr3L 3422620 3422657 -21120900 + AT_rich Low_complexity Low_complexity 1 37 0 2 611 26 0 0 0 chr3L 3422933 3422959 -21120598 + AT_rich Low_complexity Low_complexity 1 26 0 2 611 200 111 83 0 chr3L 3425768 3425804 -21117753 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 2 611 25 0 0 0 chr3L 3425960 3425985 -21117572 + AT_rich Low_complexity Low_complexity 1 25 0 2 611 189 74 0 0 chr3L 3428424 3428451 -21115106 + (CAG)n Simple_repeat Simple_repeat 3 29 0 2 611 22 56 0 0 chr3L 3432787 3432823 -21110734 + AT_rich Low_complexity Low_complexity 1 36 0 2 611 192 40 0 0 chr3L 3434116 3434141 -21109416 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 611 255 122 0 0 chr3L 3436992 3437041 -21106516 + (A)n Simple_repeat Simple_repeat 1 49 0 2 611 201 244 0 0 chr3L 3437509 3437554 -21106003 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 611 222 62 0 0 chr3L 3440669 3440701 -21102856 + (ATGGTG)n Simple_repeat Simple_repeat 5 36 0 2 611 23 0 0 0 chr3L 3441700 3441723 -21101834 + AT_rich Low_complexity Low_complexity 1 23 0 2 611 217 218 0 0 chr3L 3442523 3442578 -21100979 + CT-rich Low_complexity Low_complexity 2 56 0 2 611 294 73 0 0 chr3L 3445678 3445719 -21097838 + (TAA)n Simple_repeat Simple_repeat 3 43 0 2 611 38 85 0 0 chr3L 3447825 3447919 -21095638 + AT_rich Low_complexity Low_complexity 1 94 0 2 611 23 0 0 0 chr3L 3448233 3448256 -21095301 + AT_rich Low_complexity Low_complexity 1 23 0 2 611 216 175 0 0 chr3L 3450311 3450351 -21093206 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 611 215 160 0 39 chr3L 3450394 3450446 -21093111 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 2 611 207 0 0 0 chr3L 3453008 3453031 -21090526 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 611 267 150 0 0 chr3L 3454611 3454671 -21088886 + (CAGT)n Simple_repeat Simple_repeat 2 61 0 2 611 223 178 0 0 chr3L 3455300 3455345 -21088212 + (CAGT)n Simple_repeat Simple_repeat 4 48 0 2 611 189 0 0 0 chr3L 3455674 3455695 -21087862 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 611 180 0 0 0 chr3L 3456092 3456112 -21087445 + (TCTA)n Simple_repeat Simple_repeat 4 23 0 2 611 216 185 0 0 chr3L 3456247 3456301 -21087256 + (CAT)n Simple_repeat Simple_repeat 2 55 0 2 611 186 143 0 0 chr3L 3458548 3458583 -21084974 + (CAT)n Simple_repeat Simple_repeat 3 37 0 2 611 202 361 0 0 chr3L 3459277 3459374 -21084183 + CT-rich Low_complexity Low_complexity 2 98 0 2 611 31 68 0 0 chr3L 3461915 3461974 -21081583 + AT_rich Low_complexity Low_complexity 1 59 0 2 611 27 73 0 0 chr3L 3468026 3468081 -21075476 + AT_rich Low_complexity Low_complexity 1 55 0 2 611 26 0 0 0 chr3L 3472046 3472072 -21071485 + AT_rich Low_complexity Low_complexity 1 26 0 2 611 27 81 0 0 chr3L 3472190 3472252 -21071305 + AT_rich Low_complexity Low_complexity 1 62 0 2 611 3111 0 0 11 chr3L 3475134 3475490 -21068067 + LINEJ1_DM LINE Jockey 4669 5020 0 2 611 225 0 0 0 chr3L 3475490 3475515 -21068042 + (A)n Simple_repeat Simple_repeat 1 25 0 2 611 249 33 0 0 chr3L 3477866 3477896 -21065661 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 611 200 179 51 0 chr3L 3480069 3480108 -21063449 + (TATG)n Simple_repeat Simple_repeat 3 43 0 2 611 201 162 0 0 chr3L 3481168 3481205 -21062352 + CT-rich Low_complexity Low_complexity 2 38 0 2 611 207 200 0 0 chr3L 3485331 3485376 -21058181 + A-rich Low_complexity Low_complexity 3 47 0 2 611 215 232 24 35 chr3L 3490303 3490388 -21053169 + (TTGG)n Simple_repeat Simple_repeat 3 86 0 2 611 195 69 0 0 chr3L 3494721 3494750 -21048807 + (CAGT)n Simple_repeat Simple_repeat 3 31 0 2 611 29 28 0 0 chr3L 3496036 3496072 -21047485 + AT_rich Low_complexity Low_complexity 1 36 0 2 611 22 0 0 0 chr3L 3496727 3496749 -21046808 + AT_rich Low_complexity Low_complexity 1 22 0 2 611 24 32 0 0 chr3L 3496765 3496796 -21046761 + AT_rich Low_complexity Low_complexity 1 31 0 2 611 198 71 0 0 chr3L 3500334 3500362 -21043195 + (TTG)n Simple_repeat Simple_repeat 3 30 0 2 611 237 33 0 0 chr3L 3500640 3500670 -21042887 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 611 27 49 0 0 chr3L 3500976 3501017 -21042540 + AT_rich Low_complexity Low_complexity 1 41 0 2 611 205 209 23 0 chr3L 3503643 3503686 -21039871 + (TTG)n Simple_repeat Simple_repeat 3 46 0 2 611 22 68 0 40 chr3L 3505316 3505392 -21038165 + AT_rich Low_complexity Low_complexity 1 73 0 2 611 21 0 0 0 chr3L 3505877 3505898 -21037659 + AT_rich Low_complexity Low_complexity 1 21 0 2 611 304 315 0 0 chr3L 3506130 3506241 -21037316 + (TAA)n Simple_repeat Simple_repeat 2 112 0 2 611 253 250 14 0 chr3L 3509732 3509804 -21033753 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 611 22 56 0 0 chr3L 3513043 3513079 -21030478 + AT_rich Low_complexity Low_complexity 1 36 0 2 611 225 178 0 0 chr3L 3516008 3516053 -21027504 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 611 202 217 0 0 chr3L 3516640 3516686 -21026871 + (CAA)n Simple_repeat Simple_repeat 2 47 0 2 611 271 266 0 0 chr3L 3516737 3516816 -21026741 + (CAA)n Simple_repeat Simple_repeat 3 81 0 2 611 212 184 20 0 chr3L 3520544 3520593 -21022964 + T-rich Low_complexity Low_complexity 3 52 0 2 611 236 208 0 0 chr3L 3521634 3521682 -21021875 + A-rich Low_complexity Low_complexity 1 48 0 2 611 21 0 0 0 chr3L 3522921 3522942 -21020615 + AT_rich Low_complexity Low_complexity 1 21 0 2 611 32 0 0 0 chr3L 3527802 3527834 -21015723 + AT_rich Low_complexity Low_complexity 1 32 0 2 611 21 0 0 0 chr3L 3528678 3528699 -21014858 + AT_rich Low_complexity Low_complexity 1 21 0 2 611 228 67 0 0 chr3L 3529106 3529136 -21014421 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 611 222 346 0 0 chr3L 3530513 3530591 -21012966 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 611 35 0 0 0 chr3L 3531532 3531567 -21011990 + AT_rich Low_complexity Low_complexity 1 35 0 2 611 219 146 0 0 chr3L 3536470 3536511 -21007046 + (A)n Simple_repeat Simple_repeat 1 41 0 2 611 210 250 0 0 chr3L 3536839 3536895 -21006662 + (TTG)n Simple_repeat Simple_repeat 2 57 0 2 612 208 108 54 0 chr3L 3540475 3540512 -21003045 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 612 205 250 0 0 chr3L 3542599 3542643 -21000914 + CT-rich Low_complexity Low_complexity 4 47 0 2 612 181 161 16 31 chr3L 3543010 3543074 -21000483 + T-rich Low_complexity Low_complexity 3 65 0 2 612 295 255 48 24 chr3L 3543409 3543574 -20999983 + (CTG)n Simple_repeat Simple_repeat 1 169 0 2 612 23 33 0 0 chr3L 3543806 3543836 -20999721 + AT_rich Low_complexity Low_complexity 1 30 0 2 612 21 0 0 0 chr3L 3544432 3544453 -20999104 + AT_rich Low_complexity Low_complexity 1 21 0 2 612 34 0 0 0 chr3L 3546290 3546324 -20997233 + AT_rich Low_complexity Low_complexity 1 34 0 2 612 234 150 0 0 chr3L 3546784 3546824 -20996733 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 612 29 47 0 0 chr3L 3547712 3547755 -20995802 + AT_rich Low_complexity Low_complexity 1 43 0 2 612 24 32 0 0 chr3L 3548099 3548130 -20995427 + AT_rich Low_complexity Low_complexity 1 31 0 2 612 27 73 0 0 chr3L 3548752 3548807 -20994750 + AT_rich Low_complexity Low_complexity 1 55 0 2 612 180 0 0 0 chr3L 3552590 3552610 -20990947 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 612 194 150 25 0 chr3L 3555929 3555969 -20987588 + (TCG)n Simple_repeat Simple_repeat 2 42 0 2 612 198 103 0 0 chr3L 3560955 3560984 -20982573 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 612 195 139 0 0 chr3L 3561980 3562016 -20981541 + (TTA)n Simple_repeat Simple_repeat 2 37 0 2 612 25 0 0 0 chr3L 3565662 3565687 -20977870 + AT_rich Low_complexity Low_complexity 1 25 0 2 612 254 250 0 0 chr3L 3569689 3569745 -20973812 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 612 24 53 0 0 chr3L 3571752 3571790 -20971767 + AT_rich Low_complexity Low_complexity 1 38 0 2 612 225 65 0 0 chr3L 3572033 3572064 -20971493 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 612 21 57 0 0 chr3L 3573975 3574010 -20969547 + AT_rich Low_complexity Low_complexity 1 35 0 2 612 21 0 0 0 chr3L 3574490 3574511 -20969046 + AT_rich Low_complexity Low_complexity 1 21 0 2 612 22 0 0 0 chr3L 3574819 3574841 -20968716 + AT_rich Low_complexity Low_complexity 1 22 0 2 612 189 107 0 0 chr3L 3578320 3578348 -20965209 + (CACCAT)n Simple_repeat Simple_repeat 4 31 0 2 612 183 42 0 0 chr3L 3586203 3586227 -20957330 + (TTTTTG)n Simple_repeat Simple_repeat 4 27 0 2 612 21 0 0 0 chr3L 3588650 3588671 -20954886 + AT_rich Low_complexity Low_complexity 1 21 0 2 612 207 0 0 0 chr3L 3589510 3589533 -20954024 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 612 23 78 0 0 chr3L 3594022 3594073 -20949484 + AT_rich Low_complexity Low_complexity 1 51 0 2 612 2297 0 0 0 chr3L 3601353 3601629 -20941928 + Copia_LTR LTR Copia 1 276 0 2 612 22075 6 0 2 chr3L 3601629 3606330 -20937227 + Copia_I LTR Copia 1 4593 0 2 612 2297 0 0 0 chr3L 3606330 3606606 -20936951 + Copia_LTR LTR Copia 1 276 0 2 612 27 29 0 0 chr3L 3607427 3607461 -20936096 + AT_rich Low_complexity Low_complexity 1 34 0 2 612 23 0 0 0 chr3L 3610476 3610499 -20933058 + AT_rich Low_complexity Low_complexity 1 23 0 2 612 23 0 0 0 chr3L 3611608 3611631 -20931926 + AT_rich Low_complexity Low_complexity 1 23 0 2 612 22 56 0 0 chr3L 3612553 3612589 -20930968 + AT_rich Low_complexity Low_complexity 1 36 0 2 612 23 68 0 0 chr3L 3619672 3619716 -20923841 + AT_rich Low_complexity Low_complexity 1 44 0 2 612 247 244 65 113 chr3L 3624113 3624344 -20919213 + SAR_DM Satellite Satellite 574 793 -679 2 612 331 280 16 21 chr3L 3624243 3624433 -20919124 - XDMR_DM Unknown Unknown -7 353 165 2 612 32 43 0 0 chr3L 3625844 3625890 -20917667 + AT_rich Low_complexity Low_complexity 1 46 0 2 612 25 31 0 0 chr3L 3632410 3632442 -20911115 + AT_rich Low_complexity Low_complexity 1 32 0 2 612 26 0 0 0 chr3L 3632731 3632757 -20910800 + AT_rich Low_complexity Low_complexity 1 26 0 2 612 24 0 0 0 chr3L 3636543 3636567 -20906990 + AT_rich Low_complexity Low_complexity 1 24 0 2 612 21 36 0 0 chr3L 3638771 3638799 -20904758 + AT_rich Low_complexity Low_complexity 1 28 0 2 612 24 53 0 0 chr3L 3642754 3642792 -20900765 + AT_rich Low_complexity Low_complexity 1 38 0 2 612 231 103 0 0 chr3L 3644102 3644141 -20899416 + (TAAAAA)n Simple_repeat Simple_repeat 5 43 0 2 612 21 71 0 0 chr3L 3644542 3644584 -20898973 + AT_rich Low_complexity Low_complexity 1 42 0 2 612 364 186 0 30 chr3L 3644743 3644843 -20898714 + (CAA)n Simple_repeat Simple_repeat 2 98 0 2 612 258 148 0 0 chr3L 3644877 3644931 -20898626 + (CCA)n Simple_repeat Simple_repeat 1 54 0 2 612 272 135 0 0 chr3L 3645996 3646048 -20897509 + ROO_I LTR Pao 678 729 -7527 2 612 381 152 0 0 chr3L 3646176 3646268 -20897289 + ROO_I LTR Pao 641 732 -7524 2 612 278 138 17 0 chr3L 3646367 3646425 -20897132 + (CAG)n Simple_repeat Simple_repeat 3 61 0 2 612 252 122 0 0 chr3L 3646831 3646872 -20896685 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 612 220 186 0 0 chr3L 3646901 3646944 -20896613 + CT-rich Low_complexity Low_complexity 2 44 0 2 612 183 204 0 0 chr3L 3647200 3647249 -20896308 + (CAG)n Simple_repeat Simple_repeat 1 49 0 2 612 185 132 26 0 chr3L 3647732 3647770 -20895787 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 2 612 25 0 0 0 chr3L 3652647 3652672 -20890885 + AT_rich Low_complexity Low_complexity 1 25 0 2 612 23 0 0 0 chr3L 3657533 3657556 -20886001 + AT_rich Low_complexity Low_complexity 1 23 0 2 612 25 31 0 0 chr3L 3659092 3659124 -20884433 + AT_rich Low_complexity Low_complexity 1 32 0 2 612 22 0 0 0 chr3L 3661908 3661930 -20881627 + AT_rich Low_complexity Low_complexity 1 22 0 2 612 189 0 0 0 chr3L 3663636 3663657 -20879900 + (ACTG)n Simple_repeat Simple_repeat 1 21 0 2 612 207 100 0 0 chr3L 3669581 3669611 -20873946 + (CAG)n Simple_repeat Simple_repeat 3 32 0 2 613 203 152 0 0 chr3L 3675263 3675296 -20868261 + (GAGTG)n Simple_repeat Simple_repeat 4 36 0 2 613 280 192 38 13 chr3L 3678841 3678920 -20864637 - ROO_I LTR Pao -7524 732 652 2 613 184 138 29 44 chr3L 3680676 3680744 -20862813 + (CAA)n Simple_repeat Simple_repeat 1 67 0 2 613 26 30 0 0 chr3L 3684166 3684199 -20859358 + AT_rich Low_complexity Low_complexity 1 33 0 2 613 243 0 0 0 chr3L 3685689 3685716 -20857841 + (GCTTG)n Simple_repeat Simple_repeat 1 27 0 2 613 22 35 0 0 chr3L 3689011 3689040 -20854517 + AT_rich Low_complexity Low_complexity 1 29 0 2 613 22 0 0 0 chr3L 3689821 3689843 -20853714 + AT_rich Low_complexity Low_complexity 1 22 0 2 613 259 287 51 25 chr3L 3691101 3691219 -20852338 + ROO_I LTR Pao 663 783 -7473 2 613 22 35 0 0 chr3L 3694544 3694573 -20848984 + AT_rich Low_complexity Low_complexity 1 29 0 2 613 25 0 0 0 chr3L 3701377 3701402 -20842155 + AT_rich Low_complexity Low_complexity 1 25 0 2 613 22 35 0 0 chr3L 3703304 3703333 -20840224 + AT_rich Low_complexity Low_complexity 1 29 0 2 613 23 33 0 0 chr3L 3708596 3708626 -20834931 + AT_rich Low_complexity Low_complexity 1 30 0 2 613 189 74 0 0 chr3L 3709346 3709373 -20834184 + (T)n Simple_repeat Simple_repeat 1 27 0 2 613 279 164 30 0 chr3L 3711373 3711440 -20832117 - ROO_I LTR Pao -7533 723 655 2 613 246 197 63 38 chr3L 3711446 3711525 -20832032 + ROO_I LTR Pao 680 760 -7496 2 613 21 0 0 0 chr3L 3711865 3711886 -20831671 + AT_rich Low_complexity Low_complexity 1 21 0 2 613 223 241 0 0 chr3L 3712389 3712443 -20831114 + A-rich Low_complexity Low_complexity 2 55 0 2 613 44 20 0 0 chr3L 3713077 3713128 -20830429 + AT_rich Low_complexity Low_complexity 1 51 0 2 613 286 264 23 23 chr3L 3715423 3715555 -20828002 + (TA)n Simple_repeat Simple_repeat 2 133 0 2 613 288 72 35 18 chr3L 3715996 3716053 -20827504 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 2 613 22 0 0 0 chr3L 3716901 3716923 -20826634 + AT_rich Low_complexity Low_complexity 1 22 0 2 613 252 300 0 0 chr3L 3717158 3717248 -20826309 + T-rich Low_complexity Low_complexity 1 90 0 2 613 24 32 0 0 chr3L 3720176 3720207 -20823350 + AT_rich Low_complexity Low_complexity 1 31 0 2 613 216 0 0 0 chr3L 3721604 3721628 -20821929 + (TAG)n Simple_repeat Simple_repeat 1 24 0 2 613 246 208 26 13 chr3L 3723271 3723349 -20820208 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 613 264 77 0 0 chr3L 3727062 3727101 -20816456 + (CAG)n Simple_repeat Simple_repeat 2 40 0 2 613 354 185 0 0 chr3L 3733353 3733434 -20810123 + (CAT)n Simple_repeat Simple_repeat 1 81 0 2 613 21 36 0 0 chr3L 3734872 3734900 -20808657 + AT_rich Low_complexity Low_complexity 1 28 0 2 613 26 0 0 0 chr3L 3735104 3735130 -20808427 + AT_rich Low_complexity Low_complexity 1 26 0 2 613 22 0 0 0 chr3L 3736339 3736361 -20807196 + AT_rich Low_complexity Low_complexity 1 22 0 2 613 23 0 0 0 chr3L 3736976 3736999 -20806558 + AT_rich Low_complexity Low_complexity 1 23 0 2 613 207 0 0 0 chr3L 3739115 3739138 -20804419 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 613 243 173 0 0 chr3L 3742668 3742720 -20800837 + (CTG)n Simple_repeat Simple_repeat 3 54 0 2 613 342 206 0 0 chr3L 3742774 3742866 -20800691 - ROO_I LTR Pao -7527 729 638 2 613 30 59 0 0 chr3L 3743134 3743185 -20800372 + AT_rich Low_complexity Low_complexity 1 51 0 2 613 207 0 0 0 chr3L 3743233 3743256 -20800301 + (TA)n Simple_repeat Simple_repeat 2 24 0 2 613 25 51 0 0 chr3L 3744993 3745032 -20798525 + AT_rich Low_complexity Low_complexity 1 39 0 2 613 25 51 0 0 chr3L 3746116 3746155 -20797402 + AT_rich Low_complexity Low_complexity 1 39 0 2 613 26 0 0 0 chr3L 3747300 3747326 -20796231 + AT_rich Low_complexity Low_complexity 1 26 0 2 613 24 32 0 0 chr3L 3749345 3749376 -20794181 + AT_rich Low_complexity Low_complexity 1 31 0 2 613 23 0 0 0 chr3L 3750006 3750029 -20793528 + AT_rich Low_complexity Low_complexity 1 23 0 2 613 25 0 0 0 chr3L 3750592 3750617 -20792940 + AT_rich Low_complexity Low_complexity 1 25 0 2 613 210 143 0 0 chr3L 3751558 3751593 -20791964 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 613 26 30 0 0 chr3L 3752316 3752349 -20791208 + AT_rich Low_complexity Low_complexity 1 33 0 2 613 219 36 0 0 chr3L 3756939 3756967 -20786590 + (GA)n Simple_repeat Simple_repeat 2 29 0 2 613 198 103 0 0 chr3L 3760112 3760141 -20783416 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 613 24 0 0 0 chr3L 3762181 3762205 -20781352 + AT_rich Low_complexity Low_complexity 1 24 0 2 613 23 0 0 0 chr3L 3762517 3762540 -20781017 + AT_rich Low_complexity Low_complexity 1 23 0 2 613 23 0 0 0 chr3L 3763142 3763165 -20780392 + AT_rich Low_complexity Low_complexity 1 23 0 2 613 269 0 56 0 chr3L 3763800 3763836 -20779721 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 2 613 26 30 0 0 chr3L 3766302 3766335 -20777222 + AT_rich Low_complexity Low_complexity 1 33 0 2 613 207 100 0 0 chr3L 3766549 3766579 -20776978 + (TATG)n Simple_repeat Simple_repeat 3 32 0 2 613 26 64 0 0 chr3L 3766764 3766811 -20776746 + AT_rich Low_complexity Low_complexity 1 47 0 2 613 27 0 0 0 chr3L 3767732 3767759 -20775798 + AT_rich Low_complexity Low_complexity 1 27 0 2 613 21 36 0 0 chr3L 3769177 3769205 -20774352 + AT_rich Low_complexity Low_complexity 1 28 0 2 613 215 208 0 40 chr3L 3771550 3771600 -20771957 + (TTG)n Simple_repeat Simple_repeat 2 49 0 2 613 231 103 0 0 chr3L 3773064 3773103 -20770454 + (T)n Simple_repeat Simple_repeat 1 39 0 2 613 25 31 0 0 chr3L 3777509 3777541 -20766016 + AT_rich Low_complexity Low_complexity 1 32 0 2 613 27 0 0 0 chr3L 3778772 3778799 -20764758 + AT_rich Low_complexity Low_complexity 1 27 0 2 613 25 31 0 0 chr3L 3779219 3779251 -20764306 + AT_rich Low_complexity Low_complexity 1 32 0 2 613 24 67 0 0 chr3L 3779504 3779549 -20764008 + AT_rich Low_complexity Low_complexity 1 45 0 2 613 198 103 0 0 chr3L 3780004 3780033 -20763524 + (AGGGGG)n Simple_repeat Simple_repeat 3 31 0 2 613 188 67 0 32 chr3L 3780462 3780493 -20763064 + (CTG)n Simple_repeat Simple_repeat 1 30 0 2 613 301 233 0 62 chr3L 3780738 3780834 -20762723 - ROO_I LTR Pao -7511 745 656 2 613 210 242 16 0 chr3L 3781019 3781081 -20762476 + (CTG)n Simple_repeat Simple_repeat 3 65 0 2 613 236 170 0 154 chr3L 3781082 3781186 -20762371 - ROO_I LTR Pao -7522 734 647 2 613 217 180 0 20 chr3L 3789027 3789078 -20754479 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 613 21 0 0 0 chr3L 3790474 3790495 -20753062 + AT_rich Low_complexity Low_complexity 1 21 0 2 613 21 36 0 0 chr3L 3791510 3791538 -20752019 + AT_rich Low_complexity Low_complexity 1 28 0 2 613 33 73 0 0 chr3L 3795176 3795244 -20748313 + AT_rich Low_complexity Low_complexity 1 68 0 2 613 21 0 0 0 chr3L 3796131 3796152 -20747405 + AT_rich Low_complexity Low_complexity 1 21 0 2 613 27 73 0 0 chr3L 3798738 3798793 -20744764 + AT_rich Low_complexity Low_complexity 1 55 0 2 613 27 0 0 0 chr3L 3799427 3799454 -20744103 + AT_rich Low_complexity Low_complexity 1 27 0 2 613 321 125 0 0 chr3L 3800025 3800081 -20743476 + (CTG)n Simple_repeat Simple_repeat 3 58 0 2 613 352 82 16 16 chr3L 3800320 3800382 -20743175 + (CTG)n Simple_repeat Simple_repeat 3 64 0 2 613 338 245 10 10 chr3L 3800424 3800527 -20743030 + (CTG)n Simple_repeat Simple_repeat 2 104 0 2 614 35 0 0 0 chr3L 3803892 3803927 -20739630 + AT_rich Low_complexity Low_complexity 1 35 0 2 614 216 204 0 0 chr3L 3805857 3805901 -20737656 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 614 31 26 0 0 chr3L 3814028 3814066 -20729491 + AT_rich Low_complexity Low_complexity 1 38 0 2 614 21 82 0 0 chr3L 3819425 3819474 -20724083 + AT_rich Low_complexity Low_complexity 1 49 0 2 614 34 0 0 0 chr3L 3820945 3820979 -20722578 + AT_rich Low_complexity Low_complexity 1 34 0 2 614 524 119 8 25 chr3L 3825594 3825715 -20717842 + (CAG)n Simple_repeat Simple_repeat 3 121 0 2 614 22 0 0 0 chr3L 3826079 3826101 -20717456 + AT_rich Low_complexity Low_complexity 1 22 0 2 614 189 0 0 0 chr3L 3828306 3828327 -20715230 + (TC)n Simple_repeat Simple_repeat 1 21 0 2 614 21 82 0 0 chr3L 3828579 3828628 -20714929 + AT_rich Low_complexity Low_complexity 1 49 0 2 614 24 53 0 0 chr3L 3829314 3829352 -20714205 + AT_rich Low_complexity Low_complexity 1 38 0 2 614 230 338 0 0 chr3L 3829496 3829573 -20713984 + (CCG)n Simple_repeat Simple_repeat 2 78 0 2 614 259 260 0 30 chr3L 3829623 3829722 -20713835 + ROO_I LTR Pao 639 734 -7522 2 614 228 217 0 0 chr3L 3829749 3829795 -20713762 + (CAG)n Simple_repeat Simple_repeat 1 46 0 2 614 239 140 20 0 chr3L 3830576 3830626 -20712931 + (TTGG)n Simple_repeat Simple_repeat 2 52 0 2 614 234 247 55 0 chr3L 3831811 3831884 -20711673 + ROO_I LTR Pao 651 727 -7529 2 614 288 111 0 0 chr3L 3831948 3831993 -20711564 + (CAG)n Simple_repeat Simple_repeat 1 45 0 2 614 1711 0 0 0 chr3L 3833791 3833977 -20709580 + POGON1 DNA Pogo 1 186 0 2 614 28 29 0 0 chr3L 3835002 3835037 -20708520 + AT_rich Low_complexity Low_complexity 1 35 0 2 614 21 36 0 0 chr3L 3835164 3835192 -20708365 + AT_rich Low_complexity Low_complexity 1 28 0 2 614 370 213 21 0 chr3L 3836150 3836244 -20707313 + ROO_I LTR Pao 655 750 -7506 2 614 183 114 0 0 chr3L 3837681 3837716 -20705841 + (CAG)n Simple_repeat Simple_repeat 1 35 0 2 614 183 42 0 0 chr3L 3840257 3840281 -20703276 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 614 26 64 0 0 chr3L 3840836 3840883 -20702674 + AT_rich Low_complexity Low_complexity 1 47 0 2 614 252 0 0 0 chr3L 3841141 3841169 -20702388 + (GAAAA)n Simple_repeat Simple_repeat 1 28 0 2 614 23 33 0 0 chr3L 3842311 3842341 -20701216 + AT_rich Low_complexity Low_complexity 1 30 0 2 614 28 29 0 0 chr3L 3842360 3842395 -20701162 + AT_rich Low_complexity Low_complexity 1 35 0 2 614 24 53 0 0 chr3L 3845032 3845070 -20698487 + AT_rich Low_complexity Low_complexity 1 38 0 2 614 186 43 0 0 chr3L 3849258 3849281 -20694276 + (A)n Simple_repeat Simple_repeat 1 23 0 2 614 21 0 0 0 chr3L 3850820 3850841 -20692716 + AT_rich Low_complexity Low_complexity 1 21 0 2 614 212 179 0 0 chr3L 3853965 3854004 -20689553 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 2 614 198 0 0 0 chr3L 3856390 3856412 -20687145 + (A)n Simple_repeat Simple_repeat 1 22 0 2 614 23 33 0 0 chr3L 3856725 3856755 -20686802 + AT_rich Low_complexity Low_complexity 1 30 0 2 614 21 57 0 0 chr3L 3860005 3860040 -20683517 + AT_rich Low_complexity Low_complexity 1 35 0 2 614 198 0 0 0 chr3L 3861194 3861216 -20682341 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 2 614 193 75 0 48 chr3L 3861250 3861292 -20682265 + (TTTAA)n Simple_repeat Simple_repeat 5 44 0 2 614 33 25 0 0 chr3L 3861451 3861491 -20682066 + AT_rich Low_complexity Low_complexity 1 40 0 2 614 189 107 0 0 chr3L 3862334 3862362 -20681195 + (TTCGGG)n Simple_repeat Simple_repeat 6 33 0 2 614 243 61 0 0 chr3L 3865503 3865536 -20678021 + (CAG)n Simple_repeat Simple_repeat 3 35 0 2 614 363 127 0 0 chr3L 3865716 3865779 -20677778 + (CAG)n Simple_repeat Simple_repeat 1 63 0 2 614 353 157 24 0 chr3L 3866814 3866897 -20676660 - ROO_I LTR Pao -7516 740 656 2 614 33 43 0 0 chr3L 3870689 3870736 -20672821 + AT_rich Low_complexity Low_complexity 1 47 0 2 614 180 0 0 0 chr3L 3870982 3871002 -20672555 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 2 614 345 253 20 33 chr3L 3872024 3872175 -20671382 + XDMR_DM Unknown Unknown 211 359 -1 2 614 340 216 52 35 chr3L 3872180 3872295 -20671262 + XDMR Unknown Unknown 37 153 -208 2 614 24 32 0 0 chr3L 3872836 3872867 -20670690 + AT_rich Low_complexity Low_complexity 1 31 0 2 614 205 179 26 0 chr3L 3876827 3876866 -20666691 + (CAG)n Simple_repeat Simple_repeat 2 41 0 2 614 309 140 0 0 chr3L 3877126 3877183 -20666374 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 614 210 195 0 38 chr3L 3877230 3877310 -20666247 + (TTG)n Simple_repeat Simple_repeat 2 78 0 2 614 24 91 0 0 chr3L 3881131 3881197 -20662360 + AT_rich Low_complexity Low_complexity 1 66 0 2 614 24 0 0 0 chr3L 3884977 3885001 -20658556 + AT_rich Low_complexity Low_complexity 1 24 0 2 614 24 32 0 0 chr3L 3886267 3886298 -20657259 + AT_rich Low_complexity Low_complexity 1 31 0 2 614 206 234 0 0 chr3L 3887779 3887826 -20655731 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 614 204 256 0 37 chr3L 3888549 3888630 -20654927 + T-rich Low_complexity Low_complexity 3 80 0 2 614 200 34 0 33 chr3L 3889924 3889954 -20653603 + (CTG)n Simple_repeat Simple_repeat 1 29 0 2 614 21 0 0 0 chr3L 3892416 3892437 -20651120 + AT_rich Low_complexity Low_complexity 1 21 0 2 614 31 0 0 0 chr3L 3894486 3894517 -20649040 + AT_rich Low_complexity Low_complexity 1 31 0 2 614 23 54 0 0 chr3L 3910507 3910544 -20633013 + AT_rich Low_complexity Low_complexity 1 37 0 2 614 23 54 0 0 chr3L 3910573 3910610 -20632947 + AT_rich Low_complexity Low_complexity 1 37 0 2 614 25 0 0 0 chr3L 3911298 3911323 -20632234 + AT_rich Low_complexity Low_complexity 1 25 0 2 614 192 77 0 0 chr3L 3912672 3912698 -20630859 + (A)n Simple_repeat Simple_repeat 1 26 0 2 614 26 30 0 0 chr3L 3914708 3914741 -20628816 + AT_rich Low_complexity Low_complexity 1 33 0 2 614 198 0 0 0 chr3L 3918863 3918885 -20624672 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 614 27 29 0 0 chr3L 3921161 3921195 -20622362 + AT_rich Low_complexity Low_complexity 1 34 0 2 614 26 30 0 0 chr3L 3923942 3923975 -20619582 + AT_rich Low_complexity Low_complexity 1 33 0 2 614 21 36 0 0 chr3L 3924985 3925013 -20618544 + AT_rich Low_complexity Low_complexity 1 28 0 2 614 225 180 0 0 chr3L 3929116 3929166 -20614391 + (CAAT)n Simple_repeat Simple_repeat 1 50 0 2 615 204 40 0 0 chr3L 3933817 3933842 -20609715 + (T)n Simple_repeat Simple_repeat 1 25 0 2 615 22 56 0 0 chr3L 3938652 3938688 -20604869 + AT_rich Low_complexity Low_complexity 1 36 0 2 615 27 29 0 0 chr3L 3942608 3942642 -20600915 + AT_rich Low_complexity Low_complexity 1 34 0 2 615 316 206 10 30 chr3L 3944118 3944218 -20599339 + ROO_I LTR Pao 631 728 -7528 2 615 25 65 0 0 chr3L 3947278 3947324 -20596233 + AT_rich Low_complexity Low_complexity 1 46 0 2 615 24 0 0 0 chr3L 3947551 3947575 -20595982 + AT_rich Low_complexity Low_complexity 1 24 0 2 615 32 57 0 0 chr3L 3947599 3947652 -20595905 + AT_rich Low_complexity Low_complexity 1 53 0 2 615 261 128 0 0 chr3L 3948155 3948202 -20595355 + (TGG)n Simple_repeat Simple_repeat 2 48 0 2 615 201 225 0 0 chr3L 3948540 3948580 -20594977 + (CGG)n Simple_repeat Simple_repeat 1 40 0 2 615 225 139 0 0 chr3L 3949881 3949924 -20593633 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 615 216 0 0 0 chr3L 3953390 3953414 -20590143 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 615 28 29 0 0 chr3L 3956588 3956623 -20586934 + AT_rich Low_complexity Low_complexity 1 35 0 2 615 402 74 0 0 chr3L 3957571 3957625 -20585932 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 615 270 116 0 0 chr3L 3958296 3958339 -20585218 + (CAT)n Simple_repeat Simple_repeat 1 43 0 2 615 204 263 0 0 chr3L 3959727 3959784 -20583773 + CT-rich Low_complexity Low_complexity 2 58 0 2 615 29 47 0 0 chr3L 3962879 3962922 -20580635 + AT_rich Low_complexity Low_complexity 1 43 0 2 615 237 222 0 0 chr3L 3963574 3963628 -20579929 + GA-rich Low_complexity Low_complexity 2 55 0 2 615 180 0 0 0 chr3L 3964018 3964038 -20579519 + (GA)n Simple_repeat Simple_repeat 2 21 0 2 615 300 91 0 0 chr3L 3964216 3964260 -20579297 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 615 24 53 0 0 chr3L 3964644 3964682 -20578875 + AT_rich Low_complexity Low_complexity 1 38 0 2 615 207 114 0 0 chr3L 3965710 3965745 -20577812 + (GTTTG)n Simple_repeat Simple_repeat 1 35 0 2 615 203 109 87 0 chr3L 3966113 3966159 -20577398 + (CAGAC)n Simple_repeat Simple_repeat 4 53 0 2 615 201 121 0 0 chr3L 3966905 3966938 -20576619 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 2 615 248 271 0 0 chr3L 3967110 3967169 -20576388 + (CAG)n Simple_repeat Simple_repeat 1 59 0 2 615 180 152 0 0 chr3L 3969818 3969851 -20573706 + (CCGAA)n Simple_repeat Simple_repeat 4 36 0 2 615 258 136 0 0 chr3L 3970817 3970861 -20572696 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 615 227 217 0 16 chr3L 3973082 3973143 -20570414 - ROO_I LTR Pao -7540 716 657 2 615 249 162 40 13 chr3L 3973394 3973469 -20570088 + ROO_I LTR Pao 650 726 -7530 2 615 214 158 0 0 chr3L 3974723 3974761 -20568796 + (TTGGGG)n Simple_repeat Simple_repeat 3 40 0 2 615 228 211 0 66 chr3L 3976553 3976629 -20566928 + ROO_I LTR Pao 660 730 -7526 2 615 219 69 0 0 chr3L 3978994 3979023 -20564534 + (ATG)n Simple_repeat Simple_repeat 1 29 0 2 615 21 0 0 0 chr3L 3979829 3979850 -20563707 + AT_rich Low_complexity Low_complexity 1 21 0 2 615 183 80 0 0 chr3L 3983994 3984019 -20559538 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2 615 273 146 0 0 chr3L 3984472 3984520 -20559037 + (CAAAG)n Simple_repeat Simple_repeat 3 50 0 2 615 287 65 22 0 chr3L 3984804 3984850 -20558707 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 615 249 163 78 107 chr3L 3985283 3985386 -20558171 + ROO_I LTR Pao 641 740 -7516 2 615 297 51 0 0 chr3L 3986974 3987013 -20556544 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 615 219 88 0 0 chr3L 3988564 3988598 -20554959 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 2 615 180 0 0 0 chr3L 3989745 3989765 -20553792 + (CAGAA)n Simple_repeat Simple_repeat 1 20 0 2 615 195 167 0 0 chr3L 3989903 3989945 -20553612 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 2 615 22 0 0 0 chr3L 3990524 3990546 -20553011 + AT_rich Low_complexity Low_complexity 1 22 0 2 615 204 40 0 0 chr3L 3990646 3990671 -20552886 + (AATTG)n Simple_repeat Simple_repeat 4 28 0 2 615 25 0 0 0 chr3L 3990678 3990703 -20552854 + AT_rich Low_complexity Low_complexity 1 25 0 2 615 186 167 0 0 chr3L 3991695 3991731 -20551826 + (TTGTG)n Simple_repeat Simple_repeat 2 37 0 2 615 223 178 0 22 chr3L 3993101 3993147 -20550410 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 615 207 69 0 0 chr3L 3995534 3995563 -20547994 + (GTATG)n Simple_repeat Simple_repeat 5 33 0 2 615 183 42 0 0 chr3L 3995696 3995720 -20547837 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 2 615 212 200 20 0 chr3L 3996500 3996550 -20547007 + A-rich Low_complexity Low_complexity 2 52 0 2 615 405 274 8 8 chr3L 3997855 3997980 -20545577 - XDMR Unknown Unknown -236 125 1 2 615 622 276 62 20 chr3L 3997868 3998160 -20545397 + SAR_DM Satellite Satellite 603 906 -566 2 615 24 0 0 0 chr3L 3999194 3999218 -20544339 + AT_rich Low_complexity Low_complexity 1 24 0 2 615 26 50 0 0 chr3L 3999300 3999340 -20544217 + AT_rich Low_complexity Low_complexity 1 40 0 2 615 186 174 0 0 chr3L 4001078 4001124 -20542433 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 615 186 217 0 0 chr3L 4001173 4001242 -20542315 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 615 23 0 0 0 chr3L 4002285 4002308 -20541249 + AT_rich Low_complexity Low_complexity 1 23 0 2 615 21 0 0 0 chr3L 4002426 4002447 -20541110 + AT_rich Low_complexity Low_complexity 1 21 0 2 615 25 31 0 0 chr3L 4003265 4003297 -20540260 + AT_rich Low_complexity Low_complexity 1 32 0 2 615 337 245 0 29 chr3L 4007896 4008001 -20535556 - ROO_I LTR Pao -7522 734 633 2 615 220 214 36 0 chr3L 4008301 4008357 -20535200 + (CTG)n Simple_repeat Simple_repeat 1 58 0 2 615 291 253 24 0 chr3L 4008398 4008481 -20535076 + (CAG)n Simple_repeat Simple_repeat 3 87 0 2 615 21 0 0 0 chr3L 4013307 4013328 -20530229 + AT_rich Low_complexity Low_complexity 1 21 0 2 615 22 109 0 0 chr3L 4018614 4018706 -20524851 + AT_rich Low_complexity Low_complexity 1 92 0 2 615 21 36 0 0 chr3L 4019901 4019929 -20523628 + AT_rich Low_complexity Low_complexity 1 28 0 2 615 24 0 0 0 chr3L 4026393 4026417 -20517140 + AT_rich Low_complexity Low_complexity 1 24 0 2 615 27 0 0 0 chr3L 4033996 4034023 -20509534 + AT_rich Low_complexity Low_complexity 1 27 0 2 615 28 0 0 0 chr3L 4040446 4040474 -20503083 + AT_rich Low_complexity Low_complexity 1 28 0 2 615 189 196 0 0 chr3L 4040752 4040803 -20502754 + (CAA)n Simple_repeat Simple_repeat 1 51 0 2 615 21 57 0 0 chr3L 4042587 4042622 -20500935 + AT_rich Low_complexity Low_complexity 1 35 0 2 615 200 103 24 49 chr3L 4045542 4045583 -20497974 + T-rich Low_complexity Low_complexity 4 43 0 2 615 34 24 0 0 chr3L 4047593 4047634 -20495923 + AT_rich Low_complexity Low_complexity 1 41 0 2 615 205 179 0 0 chr3L 4048773 4048812 -20494745 + (ATG)n Simple_repeat Simple_repeat 1 39 0 2 615 28 0 0 0 chr3L 4049200 4049228 -20494329 + AT_rich Low_complexity Low_complexity 1 28 0 2 615 23 68 0 0 chr3L 4049305 4049349 -20494208 + AT_rich Low_complexity Low_complexity 1 44 0 2 615 212 250 0 0 chr3L 4053689 4053753 -20489804 + T-rich Low_complexity Low_complexity 1 64 0 2 615 22 0 0 0 chr3L 4056136 4056158 -20487399 + AT_rich Low_complexity Low_complexity 1 22 0 2 615 22 56 0 0 chr3L 4059648 4059684 -20483873 + AT_rich Low_complexity Low_complexity 1 36 0 2 616 24 85 0 0 chr3L 4064168 4064227 -20479330 + AT_rich Low_complexity Low_complexity 1 59 0 2 616 34 42 0 0 chr3L 4073094 4073142 -20470415 + AT_rich Low_complexity Low_complexity 1 48 0 2 616 186 103 0 0 chr3L 4075317 4075346 -20468211 + (CCGAG)n Simple_repeat Simple_repeat 4 32 0 2 616 21 0 0 0 chr3L 4076718 4076739 -20466818 + AT_rich Low_complexity Low_complexity 1 21 0 2 616 21 57 0 0 chr3L 4078702 4078737 -20464820 + AT_rich Low_complexity Low_complexity 1 35 0 2 616 24 0 0 0 chr3L 4081685 4081709 -20461848 + AT_rich Low_complexity Low_complexity 1 24 0 2 616 182 128 0 25 chr3L 4085285 4085325 -20458232 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 616 201 250 0 35 chr3L 4087719 4087777 -20455780 + A-rich Low_complexity Low_complexity 4 59 0 2 616 21 36 0 0 chr3L 4089690 4089718 -20453839 + AT_rich Low_complexity Low_complexity 1 28 0 2 616 28 71 0 0 chr3L 4089777 4089833 -20453724 + AT_rich Low_complexity Low_complexity 1 56 0 2 616 256 250 0 14 chr3L 4090361 4090434 -20453123 + GA-rich Low_complexity Low_complexity 3 74 0 2 616 242 95 0 23 chr3L 4091684 4091727 -20451830 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 616 225 65 0 0 chr3L 4092407 4092438 -20451119 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 616 28 29 0 0 chr3L 4092772 4092807 -20450750 + AT_rich Low_complexity Low_complexity 1 35 0 2 616 33 66 0 0 chr3L 4093317 4093378 -20450179 + AT_rich Low_complexity Low_complexity 1 61 0 2 616 24 0 0 0 chr3L 4096402 4096426 -20447131 + AT_rich Low_complexity Low_complexity 1 24 0 2 616 327 85 0 0 chr3L 4097532 4097579 -20445978 + (CTG)n Simple_repeat Simple_repeat 3 49 0 2 616 207 69 0 0 chr3L 4100283 4100312 -20443245 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2 616 228 67 0 0 chr3L 4101573 4101603 -20441954 + (ATGGTG)n Simple_repeat Simple_repeat 4 33 0 2 616 201 186 23 0 chr3L 4103244 4103287 -20440270 + (CAATA)n Simple_repeat Simple_repeat 4 47 0 2 616 24 91 0 0 chr3L 4107044 4107110 -20436447 + AT_rich Low_complexity Low_complexity 1 66 0 2 616 21 82 0 0 chr3L 4108030 4108079 -20435478 + AT_rich Low_complexity Low_complexity 1 49 0 2 616 198 103 0 0 chr3L 4108685 4108714 -20434843 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 616 273 57 0 0 chr3L 4118014 4118049 -20425508 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 616 25 51 0 0 chr3L 4118834 4118873 -20424684 + AT_rich Low_complexity Low_complexity 1 39 0 2 616 233 292 0 15 chr3L 4121823 4121889 -20421668 + (CATA)n Simple_repeat Simple_repeat 1 65 0 2 616 203 292 0 14 chr3L 4125413 4125486 -20418071 + (CTG)n Simple_repeat Simple_repeat 2 73 0 2 616 224 279 0 31 chr3L 4125697 4125793 -20417764 + CT-rich Low_complexity Low_complexity 2 94 0 2 616 203 255 0 0 chr3L 4130741 4130792 -20412765 + A-rich Low_complexity Low_complexity 3 53 0 2 616 243 286 12 12 chr3L 4134208 4134293 -20409264 + CT-rich Low_complexity Low_complexity 2 86 0 2 616 24 67 0 39 chr3L 4136815 4136893 -20406664 + AT_rich Low_complexity Low_complexity 1 75 0 2 616 243 157 0 0 chr3L 4139457 4139508 -20404049 + (CAT)n Simple_repeat Simple_repeat 2 52 0 2 616 36 0 0 0 chr3L 4141326 4141362 -20402195 + AT_rich Low_complexity Low_complexity 1 36 0 2 616 185 0 40 0 chr3L 4142872 4142897 -20400660 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2 616 21 36 0 0 chr3L 4142927 4142955 -20400602 + AT_rich Low_complexity Low_complexity 1 28 0 2 616 209 254 15 0 chr3L 4143298 4143365 -20400192 + (CCG)n Simple_repeat Simple_repeat 1 68 0 2 616 29 28 0 0 chr3L 4144326 4144362 -20399195 + AT_rich Low_complexity Low_complexity 1 36 0 2 616 22 0 0 0 chr3L 4147044 4147066 -20396491 + AT_rich Low_complexity Low_complexity 1 22 0 2 616 21 0 0 0 chr3L 4150748 4150769 -20392788 + AT_rich Low_complexity Low_complexity 1 21 0 2 616 25 31 0 0 chr3L 4152434 4152466 -20391091 + AT_rich Low_complexity Low_complexity 1 32 0 2 616 23 78 0 0 chr3L 4153613 4153664 -20389893 + AT_rich Low_complexity Low_complexity 1 51 0 2 616 21 36 0 0 chr3L 4154248 4154276 -20389281 + AT_rich Low_complexity Low_complexity 1 28 0 2 616 207 163 41 0 chr3L 4154284 4154333 -20389224 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 616 21 0 0 0 chr3L 4158517 4158538 -20385019 + AT_rich Low_complexity Low_complexity 1 21 0 2 616 188 143 24 0 chr3L 4158648 4158690 -20384867 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 616 23 0 0 0 chr3L 4161599 4161622 -20381935 + AT_rich Low_complexity Low_complexity 1 23 0 2 616 237 146 0 0 chr3L 4164339 4164387 -20379170 + (TCC)n Simple_repeat Simple_repeat 2 49 0 2 616 276 301 6 24 chr3L 4164967 4165137 -20378420 + (TGG)n Simple_repeat Simple_repeat 3 169 0 2 616 250 111 200 0 chr3L 4166669 4166759 -20376798 + (TTCGG)n Simple_repeat Simple_repeat 3 110 0 2 616 21 36 0 0 chr3L 4169886 4169914 -20373643 + AT_rich Low_complexity Low_complexity 1 28 0 2 616 25 31 0 0 chr3L 4170132 4170164 -20373393 + AT_rich Low_complexity Low_complexity 1 32 0 2 616 22 0 0 0 chr3L 4170278 4170300 -20373257 + AT_rich Low_complexity Low_complexity 1 22 0 2 616 247 265 0 14 chr3L 4170591 4170660 -20372897 + (CAA)n Simple_repeat Simple_repeat 1 68 0 2 616 186 43 0 0 chr3L 4171881 4171904 -20371653 + (A)n Simple_repeat Simple_repeat 1 23 0 2 616 249 146 0 0 chr3L 4178768 4178816 -20364741 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 616 196 30 29 29 chr3L 4182052 4182086 -20361471 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 2 616 284 143 23 23 chr3L 4182298 4182384 -20361173 + (TG)n Simple_repeat Simple_repeat 2 87 0 2 616 191 146 0 24 chr3L 4188584 4188626 -20354931 + (TCG)n Simple_repeat Simple_repeat 3 43 0 2 616 27 0 0 0 chr3L 4190517 4190544 -20353013 + AT_rich Low_complexity Low_complexity 1 27 0 2 616 293 62 0 20 chr3L 4193166 4193215 -20350342 + (TTAAA)n Simple_repeat Simple_repeat 2 49 0 2 617 23 0 0 0 chr3L 4203892 4203915 -20339642 + AT_rich Low_complexity Low_complexity 1 23 0 2 617 241 346 0 19 chr3L 4215764 4215923 -20327634 + (CTG)n Simple_repeat Simple_repeat 2 157 0 2 617 39 0 0 0 chr3L 4219353 4219392 -20324165 + AT_rich Low_complexity Low_complexity 1 39 0 2 617 207 100 0 0 chr3L 4224298 4224328 -20319229 + (ATTG)n Simple_repeat Simple_repeat 1 30 0 2 617 22 56 0 0 chr3L 4224682 4224718 -20318839 + AT_rich Low_complexity Low_complexity 1 36 0 2 617 239 71 24 0 chr3L 4227339 4227381 -20316176 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 617 189 107 0 0 chr3L 4232244 4232272 -20311285 + (TAAAG)n Simple_repeat Simple_repeat 2 29 0 2 617 255 189 0 0 chr3L 4236264 4236317 -20307240 + (CGGA)n Simple_repeat Simple_repeat 2 54 0 2 617 246 32 0 0 chr3L 4236653 4236684 -20306873 + (AAATG)n Simple_repeat Simple_repeat 1 31 0 2 617 270 230 14 0 chr3L 4238061 4238135 -20305422 + (CAGC)n Simple_repeat Simple_repeat 4 78 0 2 617 192 158 0 0 chr3L 4253365 4253403 -20290154 + CT-rich Low_complexity Low_complexity 1 38 0 2 617 31 102 0 0 chr3L 4254508 4254616 -20288941 + AT_rich Low_complexity Low_complexity 1 108 0 2 617 29 47 0 0 chr3L 4262560 4262603 -20280954 + AT_rich Low_complexity Low_complexity 1 43 0 2 617 25 75 0 0 chr3L 4263349 4263402 -20280155 + AT_rich Low_complexity Low_complexity 1 53 0 2 617 183 80 0 0 chr3L 4265901 4265926 -20277631 + (T)n Simple_repeat Simple_repeat 1 25 0 2 617 256 111 0 0 chr3L 4266624 4266660 -20276897 - DNAREP1_DM LINE Penelope -525 69 34 2 617 205 211 0 0 chr3L 4269586 4269624 -20273933 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 617 26 0 0 0 chr3L 4270072 4270098 -20273459 + AT_rich Low_complexity Low_complexity 1 26 0 2 617 25 31 0 0 chr3L 4273024 4273056 -20270501 + AT_rich Low_complexity Low_complexity 1 32 0 2 617 278 303 7 0 chr3L 4275117 4275302 -20268255 + (CTA)n Simple_repeat Simple_repeat 1 186 0 2 617 207 273 0 0 chr3L 4284771 4284815 -20258742 + (CAG)n Simple_repeat Simple_repeat 3 46 0 2 617 29 0 0 0 chr3L 4286932 4286961 -20256596 + AT_rich Low_complexity Low_complexity 1 29 0 2 617 26 30 0 0 chr3L 4294038 4294071 -20249486 + AT_rich Low_complexity Low_complexity 1 33 0 2 617 21 36 0 0 chr3L 4297048 4297076 -20246481 + AT_rich Low_complexity Low_complexity 1 28 0 2 617 198 0 0 0 chr3L 4298606 4298628 -20244929 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 617 192 77 0 0 chr3L 4302417 4302443 -20241114 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 617 26 50 0 0 chr3L 4309844 4309884 -20233673 + AT_rich Low_complexity Low_complexity 1 40 0 2 617 288 299 16 16 chr3L 4310674 4310803 -20232754 - XDMR Unknown Unknown -232 129 1 2 617 22 35 0 0 chr3L 4310833 4310862 -20232695 + AT_rich Low_complexity Low_complexity 1 29 0 2 617 55 60 0 36 chr3L 4313219 4313357 -20230200 + AT_rich Low_complexity Low_complexity 1 133 0 2 617 23 33 0 0 chr3L 4322422 4322452 -20221105 + AT_rich Low_complexity Low_complexity 1 30 0 2 618 4392 10 0 0 chr3L 4328786 4329267 -20214290 + T412LTR LTR LTR 1 481 0 2 618 45655 1 0 1 chr3L 4328953 4335856 -20207701 + DM412 LTR Gypsy 1 6897 0 2 618 4106 12 0 0 chr3L 4335746 4336227 -20207330 + T412LTR LTR LTR 1 481 0 2 618 227 31 31 0 chr3L 4340222 4340254 -20203303 + (CGAT)n Simple_repeat Simple_repeat 4 36 0 2 618 321 100 0 0 chr3L 4340735 4340785 -20202772 + (CAT)n Simple_repeat Simple_repeat 1 50 0 2 618 287 286 19 9 chr3L 4342940 4343046 -20200511 + ROO_I LTR Pao 633 739 -7517 2 618 28 0 0 0 chr3L 4345709 4345737 -20197820 + AT_rich Low_complexity Low_complexity 1 28 0 2 618 202 246 16 0 chr3L 4351439 4351500 -20192057 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 618 28 0 0 0 chr3L 4353650 4353678 -20189879 + AT_rich Low_complexity Low_complexity 1 28 0 2 618 22 35 0 0 chr3L 4355524 4355553 -20188004 + AT_rich Low_complexity Low_complexity 1 29 0 2 618 209 108 0 26 chr3L 4357388 4357426 -20186131 + (GGAAA)n Simple_repeat Simple_repeat 1 37 0 2 618 201 211 0 0 chr3L 4359829 4359881 -20183676 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 618 189 0 0 0 chr3L 4360223 4360244 -20183313 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2 618 203 194 0 0 chr3L 4360360 4360396 -20183161 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 618 4751 26 3 49 chr3L 4361047 4361724 -20181833 + FB4_DM DNA Tc1 1 646 -3443 2 618 4751 26 3 49 chr3L 4362156 4362833 -20180724 - FB4_DM DNA Tc1 -3443 646 1 2 618 198 103 0 0 chr3L 4363133 4363162 -20180395 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 618 206 159 23 0 chr3L 4363632 4363676 -20179881 + GA-rich Low_complexity Low_complexity 2 46 0 2 618 26 0 0 0 chr3L 4364215 4364241 -20179316 + AT_rich Low_complexity Low_complexity 1 26 0 2 618 200 86 0 28 chr3L 4368679 4368715 -20174842 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 2 618 234 214 0 0 chr3L 4370979 4371068 -20172489 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 618 25 65 0 0 chr3L 4373666 4373712 -20169845 + AT_rich Low_complexity Low_complexity 1 46 0 2 618 186 118 0 0 chr3L 4374061 4374095 -20169462 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 618 180 0 0 0 chr3L 4375315 4375335 -20168222 + (GA)n Simple_repeat Simple_repeat 2 21 0 2 618 191 88 29 0 chr3L 4375696 4375730 -20167827 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 618 21 36 0 0 chr3L 4376113 4376141 -20167416 + AT_rich Low_complexity Low_complexity 1 28 0 2 618 24 32 0 0 chr3L 4379166 4379197 -20164360 + AT_rich Low_complexity Low_complexity 1 31 0 2 618 232 111 18 18 chr3L 4380224 4380279 -20163278 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 618 25 0 0 0 chr3L 4385453 4385478 -20158079 + AT_rich Low_complexity Low_complexity 1 25 0 2 618 189 0 0 0 chr3L 4388785 4388806 -20154751 + (T)n Simple_repeat Simple_repeat 1 21 0 2 618 27 0 0 0 chr3L 4395811 4395838 -20147719 + AT_rich Low_complexity Low_complexity 1 27 0 2 618 22 35 0 0 chr3L 4398499 4398528 -20145029 + AT_rich Low_complexity Low_complexity 1 29 0 2 618 301 223 0 41 chr3L 4400733 4400831 -20142726 + ROO_I LTR Pao 632 725 -7531 2 618 243 61 0 0 chr3L 4401636 4401669 -20141888 + (CAATC)n Simple_repeat Simple_repeat 4 36 0 2 618 202 333 11 0 chr3L 4406457 4406547 -20137010 + T-rich Low_complexity Low_complexity 1 91 0 2 618 333 100 0 0 chr3L 4410952 4411002 -20132555 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 618 40 21 0 0 chr3L 4412600 4412647 -20130910 + AT_rich Low_complexity Low_complexity 1 47 0 2 618 24 0 0 0 chr3L 4412683 4412707 -20130850 + AT_rich Low_complexity Low_complexity 1 24 0 2 618 399 267 49 38 chr3L 4413402 4413667 -20129890 + SAR_DM Satellite Satellite 247 514 -958 2 618 21 57 0 0 chr3L 4413696 4413731 -20129826 + AT_rich Low_complexity Low_complexity 1 35 0 2 618 216 67 0 0 chr3L 4414726 4414756 -20128801 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 618 203 200 0 18 chr3L 4420668 4420724 -20122833 + A-rich Low_complexity Low_complexity 3 57 0 2 618 186 103 0 0 chr3L 4422871 4422900 -20120657 + (A)n Simple_repeat Simple_repeat 1 29 0 2 618 22 35 0 0 chr3L 4425397 4425426 -20118131 + AT_rich Low_complexity Low_complexity 1 29 0 2 618 46 19 0 0 chr3L 4428264 4428317 -20115240 + AT_rich Low_complexity Low_complexity 1 53 0 2 618 195 42 0 0 chr3L 4430229 4430253 -20113304 + (A)n Simple_repeat Simple_repeat 1 24 0 2 618 180 0 0 0 chr3L 4430309 4430329 -20113228 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 618 267 114 0 0 chr3L 4430465 4430509 -20113048 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 618 222 200 0 0 chr3L 4430690 4430740 -20112817 + CT-rich Low_complexity Low_complexity 1 50 0 2 618 204 229 0 0 chr3L 4431306 4431354 -20112203 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 618 217 125 18 18 chr3L 4432060 4432117 -20111440 + CT-rich Low_complexity Low_complexity 2 58 0 2 618 252 59 0 0 chr3L 4432974 4433008 -20110549 + (CTAA)n Simple_repeat Simple_repeat 3 36 0 2 618 273 125 0 0 chr3L 4433164 4433220 -20110337 + (CCAA)n Simple_repeat Simple_repeat 3 58 0 2 618 209 171 0 0 chr3L 4436539 4436574 -20106983 + (CGA)n Simple_repeat Simple_repeat 3 37 0 2 618 246 322 0 0 chr3L 4437164 4437335 -20106222 + CT-rich Low_complexity Low_complexity 1 171 0 2 618 286 309 5 38 chr3L 4437318 4437503 -20106054 + (CCA)n Simple_repeat Simple_repeat 2 180 0 2 618 215 320 7 7 chr3L 4437611 4437759 -20105798 + (CCA)n Simple_repeat Simple_repeat 1 148 0 2 618 426 20 0 0 chr3L 4438773 4438824 -20104733 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 618 25 31 0 0 chr3L 4440799 4440831 -20102726 + AT_rich Low_complexity Low_complexity 1 32 0 2 618 21 0 0 0 chr3L 4441539 4441560 -20101997 + AT_rich Low_complexity Low_complexity 1 21 0 2 618 21 0 0 0 chr3L 4442822 4442843 -20100714 + AT_rich Low_complexity Low_complexity 1 21 0 2 618 213 121 0 0 chr3L 4448841 4448874 -20094683 + (CACTC)n Simple_repeat Simple_repeat 4 36 0 2 618 7381 4 0 0 chr3L 4450223 4451016 -20092541 + BS2 LINE Jockey 11 803 -3918 2 77 43920 2 0 0 chr3L 4451976 4456687 -20086870 + BS2 LINE Jockey 11 4721 0 2 619 213 180 0 0 chr3L 4460032 4460082 -20083475 + (ATGGTG)n Simple_repeat Simple_repeat 5 54 0 2 619 224 131 0 21 chr3L 4460851 4460898 -20082659 + (TGG)n Simple_repeat Simple_repeat 3 48 0 2 619 320 323 12 19 chr3L 4460911 4461072 -20082485 + G-rich Low_complexity Low_complexity 6 165 0 2 619 27 29 0 0 chr3L 4463373 4463407 -20080150 + AT_rich Low_complexity Low_complexity 1 34 0 2 619 23 0 0 0 chr3L 4464639 4464662 -20078895 + AT_rich Low_complexity Low_complexity 1 23 0 2 619 192 40 0 0 chr3L 4465610 4465635 -20077922 + (TGG)n Simple_repeat Simple_repeat 2 26 0 2 619 192 40 0 0 chr3L 4465910 4465935 -20077622 + (TGG)n Simple_repeat Simple_repeat 2 26 0 2 619 212 235 30 20 chr3L 4465954 4466054 -20077503 + (TGG)n Simple_repeat Simple_repeat 1 101 0 2 619 348 327 0 36 chr3L 4472076 4472241 -20071316 + C-rich Low_complexity Low_complexity 1 159 0 2 619 23 0 0 0 chr3L 4472623 4472646 -20070911 + AT_rich Low_complexity Low_complexity 1 23 0 2 619 23 54 0 0 chr3L 4476445 4476482 -20067075 + AT_rich Low_complexity Low_complexity 1 37 0 2 619 34 42 0 0 chr3L 4479336 4479384 -20064173 + AT_rich Low_complexity Low_complexity 1 48 0 2 619 204 303 0 73 chr3L 4480865 4480961 -20062596 + C-rich Low_complexity Low_complexity 5 93 0 2 619 30 27 0 0 chr3L 4481663 4481700 -20061857 + AT_rich Low_complexity Low_complexity 1 37 0 2 619 336 267 21 54 chr3L 4483182 4483446 -20060111 + (CTG)n Simple_repeat Simple_repeat 1 255 0 2 619 26 50 0 0 chr3L 4484350 4484390 -20059167 + AT_rich Low_complexity Low_complexity 1 40 0 2 619 22 35 0 0 chr3L 4485268 4485297 -20058260 + AT_rich Low_complexity Low_complexity 1 29 0 2 619 37 23 0 0 chr3L 4488011 4488055 -20055502 + AT_rich Low_complexity Low_complexity 1 44 0 2 619 24 85 0 0 chr3L 4490007 4490066 -20053491 + AT_rich Low_complexity Low_complexity 1 59 0 2 619 27 73 0 0 chr3L 4494884 4494939 -20048618 + AT_rich Low_complexity Low_complexity 1 55 0 2 619 222 192 0 0 chr3L 4499488 4499540 -20044017 + (TTG)n Simple_repeat Simple_repeat 1 52 0 2 619 189 0 0 0 chr3L 4500601 4500622 -20042935 + (TTTC)n Simple_repeat Simple_repeat 1 21 0 2 619 22 0 0 0 chr3L 4505362 4505384 -20038173 + AT_rich Low_complexity Low_complexity 1 22 0 2 619 228 111 0 0 chr3L 4508476 4508512 -20035045 + (CTG)n Simple_repeat Simple_repeat 3 38 0 2 619 212 137 0 19 chr3L 4509816 4509868 -20033689 + T-rich Low_complexity Low_complexity 5 55 0 2 619 28 61 0 0 chr3L 4510367 4510416 -20033141 + AT_rich Low_complexity Low_complexity 1 49 0 2 619 26 0 0 0 chr3L 4510658 4510684 -20032873 + AT_rich Low_complexity Low_complexity 1 26 0 2 619 235 257 0 0 chr3L 4513247 4513317 -20030240 + (TGG)n Simple_repeat Simple_repeat 1 70 0 2 619 385 274 0 0 chr3L 4513995 4514148 -20029409 + (TTG)n Simple_repeat Simple_repeat 1 153 0 2 619 23 54 0 0 chr3L 4518849 4518886 -20024671 + AT_rich Low_complexity Low_complexity 1 37 0 2 619 24 32 0 0 chr3L 4520012 4520043 -20023514 + AT_rich Low_complexity Low_complexity 1 31 0 2 619 28 29 0 0 chr3L 4520129 4520164 -20023393 + AT_rich Low_complexity Low_complexity 1 35 0 2 619 29 0 0 0 chr3L 4520244 4520273 -20023284 + AT_rich Low_complexity Low_complexity 1 29 0 2 619 270 81 0 0 chr3L 4522413 4522450 -20021107 + (GCTG)n Simple_repeat Simple_repeat 2 38 0 2 619 23 0 0 0 chr3L 4523508 4523531 -20020026 + AT_rich Low_complexity Low_complexity 1 23 0 2 619 23 54 0 0 chr3L 4526133 4526170 -20017387 + AT_rich Low_complexity Low_complexity 1 37 0 2 619 25 51 0 0 chr3L 4529252 4529291 -20014266 + AT_rich Low_complexity Low_complexity 1 39 0 2 619 220 167 42 0 chr3L 4531599 4531647 -20011910 + (CATTT)n Simple_repeat Simple_repeat 1 50 0 2 619 23 0 0 0 chr3L 4532364 4532387 -20011170 + AT_rich Low_complexity Low_complexity 1 23 0 2 619 209 205 0 0 chr3L 4533217 4533256 -20010301 + A-rich Low_complexity Low_complexity 3 41 0 2 619 237 132 0 0 chr3L 4533883 4533921 -20009636 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 619 23 33 0 0 chr3L 4541830 4541860 -20001697 + AT_rich Low_complexity Low_complexity 1 30 0 2 619 23 33 0 0 chr3L 4549345 4549375 -19994182 + AT_rich Low_complexity Low_complexity 1 30 0 2 619 27 0 0 0 chr3L 4551968 4551995 -19991562 + AT_rich Low_complexity Low_complexity 1 27 0 2 619 22 56 0 0 chr3L 4553092 4553128 -19990429 + AT_rich Low_complexity Low_complexity 1 36 0 2 619 28 0 0 0 chr3L 4554304 4554332 -19989225 + AT_rich Low_complexity Low_complexity 1 28 0 2 619 28 29 0 0 chr3L 4555509 4555544 -19988013 + AT_rich Low_complexity Low_complexity 1 35 0 2 619 31 26 0 0 chr3L 4556326 4556364 -19987193 + AT_rich Low_complexity Low_complexity 1 38 0 2 619 249 254 0 0 chr3L 4557165 4557224 -19986333 + (CGA)n Simple_repeat Simple_repeat 3 61 0 2 619 240 211 0 0 chr3L 4557894 4557970 -19985587 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 619 189 0 0 0 chr3L 4558542 4558563 -19984994 + (CTG)n Simple_repeat Simple_repeat 2 22 0 2 619 203 105 53 0 chr3L 4564468 4564506 -19979051 + (CCAA)n Simple_repeat Simple_repeat 4 43 0 2 619 198 71 0 0 chr3L 4569630 4569658 -19973899 + (GAGTG)n Simple_repeat Simple_repeat 4 31 0 2 619 198 0 0 0 chr3L 4570869 4570891 -19972666 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 619 256 275 0 0 chr3L 4575514 4575583 -19967974 + (CAG)n Simple_repeat Simple_repeat 1 69 0 2 619 262 220 30 0 chr3L 4575599 4575699 -19967858 + ROO_I LTR Pao 639 741 -7515 2 619 224 100 25 0 chr3L 4576131 4576171 -19967386 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 619 33 25 0 0 chr3L 4576806 4576846 -19966711 + AT_rich Low_complexity Low_complexity 1 40 0 2 619 233 204 0 0 chr3L 4577320 4577374 -19966183 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 619 24 32 0 0 chr3L 4578907 4578938 -19964619 + AT_rich Low_complexity Low_complexity 1 31 0 2 619 22 0 0 0 chr3L 4579901 4579923 -19963634 + AT_rich Low_complexity Low_complexity 1 22 0 2 619 22 0 0 0 chr3L 4579968 4579990 -19963567 + AT_rich Low_complexity Low_complexity 1 22 0 2 619 25 0 0 0 chr3L 4581274 4581299 -19962258 + AT_rich Low_complexity Low_complexity 1 25 0 2 619 212 171 0 0 chr3L 4582241 4582282 -19961275 + A-rich Low_complexity Low_complexity 1 41 0 2 619 316 270 0 0 chr3L 4582451 4582562 -19960995 + CT-rich Low_complexity Low_complexity 1 111 0 2 619 254 210 45 61 chr3L 4582880 4583012 -19960545 + (TCTA)n Simple_repeat Simple_repeat 2 131 0 2 619 189 0 0 0 chr3L 4586539 4586560 -19956997 + (A)n Simple_repeat Simple_repeat 1 21 0 2 620 25 0 0 0 chr3L 4588449 4588474 -19955083 + AT_rich Low_complexity Low_complexity 1 25 0 2 620 387 207 0 26 chr3L 4590211 4590325 -19953232 + ROO_I LTR Pao 641 751 -7505 2 620 33 25 0 0 chr3L 4591315 4591355 -19952202 + AT_rich Low_complexity Low_complexity 1 40 0 2 620 21 0 0 0 chr3L 4592390 4592411 -19951146 + AT_rich Low_complexity Low_complexity 1 21 0 2 620 22 35 0 0 chr3L 4592986 4593015 -19950542 + AT_rich Low_complexity Low_complexity 1 29 0 2 620 21 57 0 0 chr3L 4593276 4593311 -19950246 + AT_rich Low_complexity Low_complexity 1 35 0 2 620 180 0 0 0 chr3L 4594095 4594115 -19949442 + (GATTG)n Simple_repeat Simple_repeat 1 20 0 2 620 199 146 18 18 chr3L 4594522 4594578 -19948979 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 620 210 150 0 0 chr3L 4597647 4597687 -19945870 + (GCTG)n Simple_repeat Simple_repeat 1 40 0 2 620 180 152 0 0 chr3L 4598501 4598534 -19945023 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 620 210 37 0 0 chr3L 4602174 4602201 -19941356 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 620 31 26 0 0 chr3L 4603642 4603680 -19939877 + AT_rich Low_complexity Low_complexity 1 38 0 2 620 27 0 0 0 chr3L 4615461 4615488 -19928069 + AT_rich Low_complexity Low_complexity 1 27 0 2 620 21 36 0 0 chr3L 4618514 4618542 -19925015 + AT_rich Low_complexity Low_complexity 1 28 0 2 620 241 242 0 0 chr3L 4619824 4619886 -19923671 + GA-rich Low_complexity Low_complexity 2 63 0 2 620 180 0 0 0 chr3L 4620309 4620329 -19923228 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 620 205 186 0 0 chr3L 4624399 4624442 -19919115 + A-rich Low_complexity Low_complexity 1 43 0 2 620 38 22 0 0 chr3L 4626607 4626652 -19916905 + AT_rich Low_complexity Low_complexity 1 45 0 2 620 29 60 0 0 chr3L 4629435 4629485 -19914072 + AT_rich Low_complexity Low_complexity 1 50 0 2 620 288 0 0 0 chr3L 4630082 4630114 -19913443 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2 620 22 35 0 0 chr3L 4632634 4632663 -19910894 + AT_rich Low_complexity Low_complexity 1 29 0 2 620 213 94 0 0 chr3L 4633752 4633784 -19909773 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 620 22 56 0 0 chr3L 4634360 4634396 -19909161 + AT_rich Low_complexity Low_complexity 1 36 0 2 620 216 0 0 0 chr3L 4638605 4638629 -19904928 + (CTG)n Simple_repeat Simple_repeat 3 26 0 2 620 189 74 0 0 chr3L 4638812 4638839 -19904718 + (CAG)n Simple_repeat Simple_repeat 2 28 0 2 620 23 33 0 0 chr3L 4639054 4639084 -19904473 + AT_rich Low_complexity Low_complexity 1 30 0 2 620 238 227 15 0 chr3L 4639131 4639197 -19904360 + (TTAA)n Simple_repeat Simple_repeat 2 68 0 2 620 22 56 0 0 chr3L 4642854 4642890 -19900667 + AT_rich Low_complexity Low_complexity 1 36 0 2 620 21 71 0 0 chr3L 4647130 4647172 -19896385 + AT_rich Low_complexity Low_complexity 1 42 0 2 620 29 0 0 0 chr3L 4650281 4650310 -19893247 + AT_rich Low_complexity Low_complexity 1 29 0 2 620 25 51 0 0 chr3L 4655885 4655924 -19887633 + AT_rich Low_complexity Low_complexity 1 39 0 2 620 26 0 0 0 chr3L 4656495 4656521 -19887036 + AT_rich Low_complexity Low_complexity 1 26 0 2 620 31 0 0 0 chr3L 4658019 4658050 -19885507 + AT_rich Low_complexity Low_complexity 1 31 0 2 620 23 33 0 0 chr3L 4658080 4658110 -19885447 + AT_rich Low_complexity Low_complexity 1 30 0 2 620 21 0 0 0 chr3L 4660046 4660067 -19883490 + AT_rich Low_complexity Low_complexity 1 21 0 2 620 183 42 0 0 chr3L 4661508 4661532 -19882025 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 620 208 174 0 21 chr3L 4663839 4663886 -19879671 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 620 204 40 0 0 chr3L 4668727 4668752 -19874805 + (CAG)n Simple_repeat Simple_repeat 3 27 0 2 620 279 0 0 0 chr3L 4671582 4671613 -19871944 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 620 239 164 0 18 chr3L 4672131 4672187 -19871370 - ROO_I LTR Pao -7523 733 679 2 620 186 103 0 0 chr3L 4672660 4672689 -19870868 + (ATG)n Simple_repeat Simple_repeat 1 29 0 2 620 23 54 0 0 chr3L 4674094 4674131 -19869426 + AT_rich Low_complexity Low_complexity 1 37 0 2 620 233 262 15 15 chr3L 4675598 4675664 -19867893 + (CCG)n Simple_repeat Simple_repeat 2 67 0 2 620 207 167 0 0 chr3L 4676540 4676576 -19866981 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 620 215 179 15 0 chr3L 4678768 4678835 -19864722 + (CAA)n Simple_repeat Simple_repeat 3 70 0 2 620 23 33 0 0 chr3L 4679231 4679261 -19864296 + AT_rich Low_complexity Low_complexity 1 30 0 2 620 24 0 0 0 chr3L 4680286 4680310 -19863247 + AT_rich Low_complexity Low_complexity 1 24 0 2 620 23 0 0 0 chr3L 4680999 4681022 -19862535 + AT_rich Low_complexity Low_complexity 1 23 0 2 620 22 56 0 0 chr3L 4681612 4681648 -19861909 + AT_rich Low_complexity Low_complexity 1 36 0 2 620 26 0 0 0 chr3L 4681917 4681943 -19861614 + AT_rich Low_complexity Low_complexity 1 26 0 2 620 27 0 0 0 chr3L 4683284 4683311 -19860246 + AT_rich Low_complexity Low_complexity 1 27 0 2 620 23 0 0 0 chr3L 4683366 4683389 -19860168 + AT_rich Low_complexity Low_complexity 1 23 0 2 620 21 0 0 0 chr3L 4684524 4684545 -19859012 + AT_rich Low_complexity Low_complexity 1 21 0 2 620 44 46 0 0 chr3L 4684636 4684701 -19858856 + AT_rich Low_complexity Low_complexity 1 65 0 2 620 34 65 0 0 chr3L 4685432 4685494 -19858063 + AT_rich Low_complexity Low_complexity 1 62 0 2 620 25 51 0 0 chr3L 4686025 4686064 -19857493 + AT_rich Low_complexity Low_complexity 1 39 0 2 620 26 50 0 0 chr3L 4691999 4692039 -19851518 + AT_rich Low_complexity Low_complexity 1 40 0 2 620 22 35 0 0 chr3L 4694206 4694235 -19849322 + AT_rich Low_complexity Low_complexity 1 29 0 2 620 27 0 0 0 chr3L 4695305 4695332 -19848225 + AT_rich Low_complexity Low_complexity 1 27 0 2 620 21 100 0 0 chr3L 4695383 4695453 -19848104 + AT_rich Low_complexity Low_complexity 1 70 0 2 620 26 50 0 0 chr3L 4698494 4698534 -19845023 + AT_rich Low_complexity Low_complexity 1 40 0 2 620 284 143 18 0 chr3L 4700817 4700873 -19842684 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 620 24 0 0 0 chr3L 4700930 4700954 -19842603 + AT_rich Low_complexity Low_complexity 1 24 0 2 620 261 208 0 49 chr3L 4701685 4701766 -19841791 - ROO_I LTR Pao -7528 728 652 2 620 23 33 0 0 chr3L 4702092 4702122 -19841435 + AT_rich Low_complexity Low_complexity 1 30 0 2 620 228 122 0 0 chr3L 4705428 4705469 -19838088 + (CAG)n Simple_repeat Simple_repeat 3 43 0 2 620 271 256 0 49 chr3L 4716659 4716741 -19826816 + (TTCA)n Simple_repeat Simple_repeat 1 78 0 2 621 189 0 0 0 chr3L 4719732 4719753 -19823804 + (TCC)n Simple_repeat Simple_repeat 3 23 0 2 621 297 109 0 0 chr3L 4720072 4720118 -19823439 + (CAT)n Simple_repeat Simple_repeat 3 48 0 2 621 26 30 0 0 chr3L 4721397 4721430 -19822127 + AT_rich Low_complexity Low_complexity 1 33 0 2 621 27 0 0 0 chr3L 4725877 4725904 -19817653 + AT_rich Low_complexity Low_complexity 1 27 0 2 621 23 0 0 0 chr3L 4726095 4726118 -19817439 + AT_rich Low_complexity Low_complexity 1 23 0 2 621 228 220 0 0 chr3L 4726758 4726808 -19816749 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 621 213 154 0 0 chr3L 4726998 4727037 -19816520 + A-rich Low_complexity Low_complexity 1 39 0 2 621 23 0 0 0 chr3L 4727615 4727638 -19815919 + AT_rich Low_complexity Low_complexity 1 23 0 2 621 231 175 0 0 chr3L 4729196 4729253 -19814304 + (CTGGGG)n Simple_repeat Simple_repeat 4 60 0 2 621 24 0 0 0 chr3L 4729514 4729538 -19814019 + AT_rich Low_complexity Low_complexity 1 24 0 2 621 262 194 0 0 chr3L 4729965 4730027 -19813530 + ROO_I LTR Pao 652 713 -7543 2 621 180 0 0 0 chr3L 4730217 4730237 -19813320 + (CAG)n Simple_repeat Simple_repeat 1 20 0 2 621 264 244 12 12 chr3L 4731732 4731815 -19811742 + ROO_I LTR Pao 647 729 -7527 2 621 27 49 0 0 chr3L 4733296 4733337 -19810220 + AT_rich Low_complexity Low_complexity 1 41 0 2 621 186 103 0 0 chr3L 4734735 4734764 -19808793 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 621 23 33 0 0 chr3L 4735377 4735407 -19808150 + AT_rich Low_complexity Low_complexity 1 30 0 2 621 207 69 0 0 chr3L 4748110 4748139 -19795418 + (ATG)n Simple_repeat Simple_repeat 3 31 0 2 621 230 231 0 15 chr3L 4748531 4748597 -19794960 + (CATCC)n Simple_repeat Simple_repeat 3 67 0 2 621 23 68 0 0 chr3L 4749999 4750043 -19793514 + AT_rich Low_complexity Low_complexity 1 44 0 2 621 21 36 0 0 chr3L 4750930 4750958 -19792599 + AT_rich Low_complexity Low_complexity 1 28 0 2 621 276 100 0 0 chr3L 4751281 4751321 -19792236 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 621 21 0 0 0 chr3L 4753415 4753436 -19790121 + AT_rich Low_complexity Low_complexity 1 21 0 2 621 23 33 0 0 chr3L 4754897 4754927 -19788630 + AT_rich Low_complexity Low_complexity 1 30 0 2 621 26 64 0 0 chr3L 4761458 4761505 -19782052 + AT_rich Low_complexity Low_complexity 1 47 0 2 621 22 0 0 0 chr3L 4764772 4764794 -19778763 + AT_rich Low_complexity Low_complexity 1 22 0 2 621 341 191 0 0 chr3L 4765009 4765098 -19778459 + ROO_I LTR Pao 641 729 -7527 2 621 198 215 0 0 chr3L 4766188 4766267 -19777290 + (CAG)n Simple_repeat Simple_repeat 3 81 0 2 621 281 161 49 0 chr3L 4766756 4766837 -19776720 + ROO_I LTR Pao 659 743 -7513 2 621 205 196 20 0 chr3L 4767821 4767872 -19775685 + (CCCA)n Simple_repeat Simple_repeat 2 53 0 2 621 216 0 0 0 chr3L 4768760 4768784 -19774773 + (GGA)n Simple_repeat Simple_repeat 2 25 0 2 621 24 0 0 0 chr3L 4769032 4769056 -19774501 + AT_rich Low_complexity Low_complexity 1 24 0 2 621 269 286 0 12 chr3L 4770170 4770255 -19773302 + ROO_I LTR Pao 656 739 -7517 2 621 294 157 29 0 chr3L 4770364 4770434 -19773123 - ROO_I LTR Pao -7528 728 657 2 621 330 123 0 0 chr3L 4773268 4773325 -19770232 + (CAGT)n Simple_repeat Simple_repeat 3 59 0 2 621 6076 1 0 0 chr3L 4773710 4774361 -19769196 - DMRT1A LINE R1 -7 5176 4526 2 621 240 111 0 0 chr3L 4774364 4774400 -19769157 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 621 27 0 0 0 chr3L 4778856 4778883 -19764674 + AT_rich Low_complexity Low_complexity 1 27 0 2 621 22 0 0 0 chr3L 4781682 4781704 -19761853 + AT_rich Low_complexity Low_complexity 1 22 0 2 621 23 0 0 0 chr3L 4782633 4782656 -19760901 + AT_rich Low_complexity Low_complexity 1 23 0 2 621 34 24 0 0 chr3L 4787200 4787241 -19756316 + AT_rich Low_complexity Low_complexity 1 41 0 2 621 26 50 0 0 chr3L 4788733 4788773 -19754784 + AT_rich Low_complexity Low_complexity 1 40 0 2 621 210 118 0 0 chr3L 4789185 4789219 -19754338 + (CAG)n Simple_repeat Simple_repeat 2 35 0 2 621 197 119 24 0 chr3L 4793877 4793919 -19749638 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2 621 23 33 0 0 chr3L 4796901 4796931 -19746626 + AT_rich Low_complexity Low_complexity 1 30 0 2 621 237 108 0 0 chr3L 4800196 4800233 -19743324 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 621 191 103 0 25 chr3L 4800344 4800384 -19743173 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2 621 24 32 0 0 chr3L 4803068 4803099 -19740458 + AT_rich Low_complexity Low_complexity 1 31 0 2 621 21 82 0 0 chr3L 4824949 4824998 -19718559 + AT_rich Low_complexity Low_complexity 1 49 0 2 621 189 74 0 0 chr3L 4832925 4832952 -19710605 + (TTG)n Simple_repeat Simple_repeat 3 29 0 2 621 216 97 0 0 chr3L 4834162 4834193 -19709364 + (CAGGC)n Simple_repeat Simple_repeat 1 31 0 2 621 282 56 0 0 chr3L 4834860 4834896 -19708661 + (GCTG)n Simple_repeat Simple_repeat 2 37 0 2 621 23 68 0 0 chr3L 4841427 4841471 -19702086 + AT_rich Low_complexity Low_complexity 1 44 0 2 621 198 0 0 0 chr3L 4843127 4843149 -19700408 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 621 24 67 0 0 chr3L 4843366 4843411 -19700146 + AT_rich Low_complexity Low_complexity 1 45 0 2 622 26 0 0 0 chr3L 4852772 4852798 -19690759 + AT_rich Low_complexity Low_complexity 1 26 0 2 622 215 203 17 0 chr3L 4854980 4855039 -19688518 + (TCG)n Simple_repeat Simple_repeat 2 61 0 2 622 22 0 0 0 chr3L 4855946 4855968 -19687589 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 189 0 0 0 chr3L 4857270 4857291 -19686266 + (A)n Simple_repeat Simple_repeat 1 21 0 2 622 21 36 0 0 chr3L 4862656 4862684 -19680873 + AT_rich Low_complexity Low_complexity 1 28 0 2 622 25 31 0 0 chr3L 4863686 4863718 -19679839 + AT_rich Low_complexity Low_complexity 1 32 0 2 622 256 196 89 0 chr3L 4864748 4864804 -19678753 + PENELOPE LINE Penelope 3925 3985 -176 2 622 22 0 0 0 chr3L 4866437 4866459 -19677098 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 22 0 0 0 chr3L 4867930 4867952 -19675605 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 234 208 0 0 chr3L 4869878 4869931 -19673626 + (TCTG)n Simple_repeat Simple_repeat 3 55 0 2 622 223 231 0 0 chr3L 4876397 4876449 -19667108 + (CACCAT)n Simple_repeat Simple_repeat 3 54 0 2 622 204 40 0 0 chr3L 4878829 4878854 -19664703 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 622 213 39 0 0 chr3L 4879741 4879767 -19663790 + (CTTTG)n Simple_repeat Simple_repeat 5 30 0 2 622 21 36 0 0 chr3L 4880245 4880273 -19663284 + AT_rich Low_complexity Low_complexity 1 28 0 2 622 22 35 0 0 chr3L 4884225 4884254 -19659303 + AT_rich Low_complexity Low_complexity 1 29 0 2 622 22 56 0 0 chr3L 4884347 4884383 -19659174 + AT_rich Low_complexity Low_complexity 1 36 0 2 622 226 263 0 0 chr3L 4890643 4890719 -19652838 + (CTG)n Simple_repeat Simple_repeat 1 76 0 2 622 23 33 0 0 chr3L 4894387 4894417 -19649140 + AT_rich Low_complexity Low_complexity 1 30 0 2 622 22 0 0 0 chr3L 4896142 4896164 -19647393 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 25 0 0 0 chr3L 4898588 4898613 -19644944 + AT_rich Low_complexity Low_complexity 1 25 0 2 622 26 50 0 0 chr3L 4899817 4899857 -19643700 + AT_rich Low_complexity Low_complexity 1 40 0 2 622 1987 13 0 0 chr3L 4901182 4901406 -19642151 + DIVER_LTR LTR Pao 1 224 0 2 622 52656 3 0 0 chr3L 4901427 4907069 -19636488 + DIVER_I LTR Pao 1 5643 0 2 622 1987 13 0 0 chr3L 4907069 4907293 -19636264 + DIVER_LTR LTR Pao 1 224 0 2 622 34 55 0 0 chr3L 4908042 4908097 -19635460 + AT_rich Low_complexity Low_complexity 1 55 0 2 622 207 167 0 0 chr3L 4910026 4910068 -19633489 + (CCGAA)n Simple_repeat Simple_repeat 4 45 0 2 622 21 36 0 0 chr3L 4911442 4911470 -19632087 + AT_rich Low_complexity Low_complexity 1 28 0 2 622 237 83 0 0 chr3L 4912228 4912264 -19631293 + (CCGAA)n Simple_repeat Simple_repeat 1 36 0 2 622 35 0 0 0 chr3L 4913133 4913168 -19630389 + AT_rich Low_complexity Low_complexity 1 35 0 2 622 37 52 0 0 chr3L 4913629 4913687 -19629870 + AT_rich Low_complexity Low_complexity 1 58 0 2 622 185 65 0 31 chr3L 4914414 4914446 -19629111 + (CAGTC)n Simple_repeat Simple_repeat 3 33 0 2 622 195 129 0 0 chr3L 4917700 4917731 -19625826 + (A)n Simple_repeat Simple_repeat 1 31 0 2 622 25 31 0 0 chr3L 4918941 4918973 -19624584 + AT_rich Low_complexity Low_complexity 1 32 0 2 622 21 57 0 0 chr3L 4920204 4920239 -19623318 + AT_rich Low_complexity Low_complexity 1 35 0 2 622 22 35 0 0 chr3L 4922706 4922735 -19620822 + AT_rich Low_complexity Low_complexity 1 29 0 2 622 27 49 0 0 chr3L 4929298 4929339 -19614218 + AT_rich Low_complexity Low_complexity 1 41 0 2 622 225 160 0 39 chr3L 4929731 4929783 -19613774 + (CTCA)n Simple_repeat Simple_repeat 1 50 0 2 622 22 0 0 0 chr3L 4929922 4929944 -19613613 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 28 0 0 0 chr3L 4931148 4931176 -19612381 + AT_rich Low_complexity Low_complexity 1 28 0 2 622 25 31 0 0 chr3L 4931685 4931717 -19611840 + AT_rich Low_complexity Low_complexity 1 32 0 2 622 547 294 27 17 chr3L 4934656 4934953 -19608604 - SAR_DM Satellite Satellite -953 519 220 2 622 183 129 0 0 chr3L 4936020 4936051 -19607506 + (CATA)n Simple_repeat Simple_repeat 1 31 0 2 622 21 36 0 0 chr3L 4936754 4936782 -19606775 + AT_rich Low_complexity Low_complexity 1 28 0 2 622 30 0 0 0 chr3L 4937562 4937592 -19605965 + AT_rich Low_complexity Low_complexity 1 30 0 2 622 188 111 0 27 chr3L 4938406 4938443 -19605114 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 2 622 23 0 0 0 chr3L 4938616 4938639 -19604918 + AT_rich Low_complexity Low_complexity 1 23 0 2 622 21 36 0 0 chr3L 4941782 4941810 -19601747 + AT_rich Low_complexity Low_complexity 1 28 0 2 622 21 0 0 0 chr3L 4943000 4943021 -19600536 + AT_rich Low_complexity Low_complexity 1 21 0 2 622 183 162 0 0 chr3L 4948121 4948158 -19595399 + (CGAAA)n Simple_repeat Simple_repeat 3 39 0 2 622 21 0 0 0 chr3L 4957764 4957785 -19585772 + AT_rich Low_complexity Low_complexity 1 21 0 2 622 233 261 22 33 chr3L 4959415 4959506 -19584051 + ROO_I LTR Pao 659 748 -7508 2 622 231 317 15 38 chr3L 4959868 4959999 -19583558 + (CAG)n Simple_repeat Simple_repeat 3 130 0 2 622 278 193 45 0 chr3L 4960262 4960350 -19583207 + ROO_I LTR Pao 629 720 -7536 2 622 288 0 0 0 chr3L 4960587 4960619 -19582938 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 622 210 154 0 0 chr3L 4960902 4960941 -19582616 + (CAT)n Simple_repeat Simple_repeat 1 39 0 2 622 213 196 0 73 chr3L 4962578 4962633 -19580924 + T-rich Low_complexity Low_complexity 1 51 0 2 622 21 0 0 0 chr3L 4965245 4965266 -19578291 + AT_rich Low_complexity Low_complexity 1 21 0 2 622 226 250 40 40 chr3L 4966751 4966851 -19576706 + A-rich Low_complexity Low_complexity 5 104 0 2 622 30 45 0 0 chr3L 4967003 4967047 -19576510 + AT_rich Low_complexity Low_complexity 1 44 0 2 622 291 85 0 0 chr3L 4967852 4967899 -19575658 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 622 22 56 0 0 chr3L 4969791 4969827 -19573730 + AT_rich Low_complexity Low_complexity 1 36 0 2 622 22 0 0 0 chr3L 4971155 4971177 -19572380 + AT_rich Low_complexity Low_complexity 1 22 0 2 622 246 62 0 0 chr3L 4974949 4974981 -19568576 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 622 22 35 0 0 chr3L 4977882 4977911 -19565646 + AT_rich Low_complexity Low_complexity 1 29 0 2 622 24 0 0 0 chr3L 4978440 4978464 -19565093 + AT_rich Low_complexity Low_complexity 1 24 0 2 623 25 31 0 0 chr3L 4990181 4990213 -19553344 + AT_rich Low_complexity Low_complexity 1 32 0 2 623 21 0 0 0 chr3L 4992222 4992243 -19551314 + AT_rich Low_complexity Low_complexity 1 21 0 2 623 24 67 0 0 chr3L 4992431 4992476 -19551081 + AT_rich Low_complexity Low_complexity 1 45 0 2 623 195 100 0 0 chr3L 4993498 4993528 -19550029 + (T)n Simple_repeat Simple_repeat 1 30 0 2 623 213 108 0 0 chr3L 4998534 4998571 -19544986 + (TTGG)n Simple_repeat Simple_repeat 4 40 0 2 623 189 0 0 0 chr3L 4999729 4999750 -19543807 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 623 23 0 0 0 chr3L 5000389 5000412 -19543145 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 194 105 26 0 chr3L 5000554 5000592 -19542965 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 623 26 0 0 0 chr3L 5001067 5001093 -19542464 + AT_rich Low_complexity Low_complexity 1 26 0 2 623 21 36 0 0 chr3L 5003808 5003836 -19539721 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 21 0 0 0 chr3L 5005935 5005956 -19537601 + AT_rich Low_complexity Low_complexity 1 21 0 2 623 189 0 0 0 chr3L 5006181 5006202 -19537355 + (A)n Simple_repeat Simple_repeat 1 21 0 2 623 33 0 0 0 chr3L 5006628 5006661 -19536896 + AT_rich Low_complexity Low_complexity 1 33 0 2 623 30 0 0 0 chr3L 5010455 5010485 -19533072 + AT_rich Low_complexity Low_complexity 1 30 0 2 623 24 0 0 0 chr3L 5011749 5011773 -19531784 + AT_rich Low_complexity Low_complexity 1 24 0 2 623 23 0 0 0 chr3L 5012786 5012809 -19530748 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 299 319 0 8 chr3L 5013852 5013969 -19529588 + (TG)n Simple_repeat Simple_repeat 2 117 0 2 623 24 0 0 0 chr3L 5018952 5018976 -19524581 + AT_rich Low_complexity Low_complexity 1 24 0 2 623 23 0 0 0 chr3L 5020698 5020721 -19522836 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 186 43 0 0 chr3L 5021478 5021501 -19522056 + (CGAAG)n Simple_repeat Simple_repeat 4 26 0 2 623 210 282 0 13 chr3L 5022122 5022201 -19521356 + (CCCA)n Simple_repeat Simple_repeat 1 78 0 2 623 205 195 0 0 chr3L 5024172 5024213 -19519344 + A-rich Low_complexity Low_complexity 1 41 0 2 623 180 97 0 0 chr3L 5024544 5024575 -19518982 + (T)n Simple_repeat Simple_repeat 1 31 0 2 623 266 73 0 24 chr3L 5026913 5026955 -19516602 + (GGATG)n Simple_repeat Simple_repeat 3 43 0 2 623 21 71 0 0 chr3L 5027118 5027160 -19516397 + AT_rich Low_complexity Low_complexity 1 42 0 2 623 207 211 18 0 chr3L 5027408 5027465 -19516092 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 623 456 106 0 0 chr3L 5029267 5029333 -19514224 - DNAREP1_DM LINE Penelope 0 594 529 2 623 277 213 0 32 chr3L 5029434 5029497 -19514060 - DNAREP1_DM LINE Penelope -533 61 1 2 623 31 26 0 0 chr3L 5033392 5033430 -19510127 + AT_rich Low_complexity Low_complexity 1 38 0 2 623 3999 2 0 0 chr3L 5034213 5034641 -19508916 - ROO_LTR LTR Pao 0 428 1 2 623 75088 1 2 0 chr3L 5034641 5042879 -19500678 - ROO_I LTR Pao 0 8256 1 2 623 3999 2 0 0 chr3L 5042879 5043307 -19500250 - ROO_LTR LTR Pao 0 428 1 2 623 25 0 0 0 chr3L 5043816 5043841 -19499716 + AT_rich Low_complexity Low_complexity 1 25 0 2 623 43600 1 0 0 chr3L 5045510 5050232 -19493325 + DOC LINE Jockey 4 4725 0 2 623 204 205 0 0 chr3L 5052161 5052200 -19491357 + (CACTC)n Simple_repeat Simple_repeat 3 41 0 2 623 24 0 0 0 chr3L 5052439 5052463 -19491094 + AT_rich Low_complexity Low_complexity 1 24 0 2 623 189 94 0 0 chr3L 5053370 5053402 -19490155 + (CGA)n Simple_repeat Simple_repeat 2 33 0 2 623 194 23 93 0 chr3L 5054852 5054895 -19488662 + (TCCTG)n Simple_repeat Simple_repeat 1 47 0 2 623 195 69 0 0 chr3L 5056187 5056216 -19487341 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 623 21 36 0 0 chr3L 5057997 5058025 -19485532 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 216 67 0 0 chr3L 5059156 5059186 -19484371 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 623 387 175 138 0 chr3L 5059625 5059705 -19483852 + DNAREP1_DM LINE Penelope 504 594 0 2 623 36 40 0 0 chr3L 5060726 5060776 -19482781 + AT_rich Low_complexity Low_complexity 1 50 0 2 623 26 0 0 0 chr3L 5060826 5060852 -19482705 + AT_rich Low_complexity Low_complexity 1 26 0 2 623 26 0 0 0 chr3L 5062159 5062185 -19481372 + AT_rich Low_complexity Low_complexity 1 26 0 2 623 255 114 0 0 chr3L 5064473 5064517 -19479040 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 2 623 21 0 0 0 chr3L 5064675 5064696 -19478861 + AT_rich Low_complexity Low_complexity 1 21 0 2 623 25 0 0 0 chr3L 5064839 5064864 -19478693 + AT_rich Low_complexity Low_complexity 1 25 0 2 623 188 34 0 33 chr3L 5065872 5065902 -19477655 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2 623 29 47 0 0 chr3L 5066267 5066310 -19477247 + AT_rich Low_complexity Low_complexity 1 43 0 2 623 189 74 0 0 chr3L 5067552 5067579 -19475978 + (CAG)n Simple_repeat Simple_repeat 1 27 0 2 623 182 118 0 29 chr3L 5067671 5067706 -19475851 + (GGAGAA)n Simple_repeat Simple_repeat 2 35 0 2 623 23 33 0 0 chr3L 5069245 5069275 -19474282 + AT_rich Low_complexity Low_complexity 1 30 0 2 623 195 69 0 0 chr3L 5069434 5069463 -19474094 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 623 26 50 0 0 chr3L 5071105 5071145 -19472412 + AT_rich Low_complexity Low_complexity 1 40 0 2 623 201 167 0 0 chr3L 5071544 5071580 -19471977 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 623 33 66 0 0 chr3L 5072471 5072532 -19471025 + AT_rich Low_complexity Low_complexity 1 61 0 2 623 23 0 0 0 chr3L 5078458 5078481 -19465076 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 36 40 0 0 chr3L 5079846 5079896 -19463661 + AT_rich Low_complexity Low_complexity 1 50 0 2 623 23 0 0 0 chr3L 5083272 5083295 -19460262 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 203 194 0 0 chr3L 5085996 5086032 -19457525 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 623 231 88 0 0 chr3L 5086196 5086230 -19457327 + (TTG)n Simple_repeat Simple_repeat 3 36 0 2 623 27 49 0 0 chr3L 5088320 5088361 -19455196 + AT_rich Low_complexity Low_complexity 1 41 0 2 623 21 0 0 0 chr3L 5090532 5090553 -19453004 + AT_rich Low_complexity Low_complexity 1 21 0 2 623 245 247 11 34 chr3L 5093283 5093371 -19450186 + (TTG)n Simple_repeat Simple_repeat 2 87 0 2 623 183 100 0 0 chr3L 5093393 5093423 -19450134 + (T)n Simple_repeat Simple_repeat 1 30 0 2 623 222 184 0 0 chr3L 5094774 5094812 -19448745 + (CAG)n Simple_repeat Simple_repeat 1 38 0 2 623 186 103 0 0 chr3L 5094911 5094940 -19448617 + (CTG)n Simple_repeat Simple_repeat 2 30 0 2 623 209 239 28 14 chr3L 5097385 5097457 -19446100 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 623 222 298 0 21 chr3L 5098621 5098717 -19444840 + (CTG)n Simple_repeat Simple_repeat 2 95 0 2 623 23 0 0 0 chr3L 5101074 5101097 -19442460 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 21 57 0 0 chr3L 5102348 5102383 -19441174 + AT_rich Low_complexity Low_complexity 1 35 0 2 623 30383 0 0 0 chr3L 5104537 5107766 -19435791 + BEL_I LTR Pao 1535 4763 -641 2 623 2182 0 0 0 chr3L 5107866 5108098 -19435459 - BEL_I LTR Pao -5172 232 1 2 623 3377 0 0 0 chr3L 5108098 5108459 -19435098 - BEL_LTR LTR Pao 0 361 1 2 623 3329 6 0 0 chr3L 5108467 5108828 -19434729 - BEL_LTR LTR Pao 0 361 1 2 77 33139 1 0 0 chr3L 5108828 5112349 -19431208 - BEL_I LTR Pao 0 5404 1884 2 624 3377 0 0 0 chr3L 5112359 5112720 -19430837 - BEL_LTR LTR Pao 0 361 1 2 624 22923 0 0 0 chr3L 5112720 5115156 -19428401 - BEL_I LTR Pao 0 5404 2969 2 624 22493 0 0 0 chr3L 5115163 5117698 -19425859 + I_DM LINE I 2923 5457 -774 2 624 180 0 0 0 chr3L 5117698 5117718 -19425839 + (TAA)n Simple_repeat Simple_repeat 3 22 0 2 624 27 62 0 0 chr3L 5119082 5119130 -19424427 + AT_rich Low_complexity Low_complexity 1 48 0 2 624 26 0 0 0 chr3L 5120214 5120240 -19423317 + AT_rich Low_complexity Low_complexity 1 26 0 2 624 188 122 24 0 chr3L 5120546 5120587 -19422970 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 624 44 0 0 0 chr3L 5121458 5121502 -19422055 + AT_rich Low_complexity Low_complexity 1 44 0 2 624 257 0 30 0 chr3L 5121976 5122009 -19421548 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2 624 24 0 0 0 chr3L 5125558 5125582 -19417975 + AT_rich Low_complexity Low_complexity 1 24 0 2 624 21 0 0 0 chr3L 5129331 5129352 -19414205 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 21 36 0 0 chr3L 5145190 5145218 -19398339 + AT_rich Low_complexity Low_complexity 1 28 0 2 624 202 173 0 71 chr3L 5149272 5149328 -19394229 + T-rich Low_complexity Low_complexity 2 53 0 2 624 22 0 0 0 chr3L 5150121 5150143 -19393414 + AT_rich Low_complexity Low_complexity 1 22 0 2 624 201 179 35 18 chr3L 5150615 5150672 -19392885 + T-rich Low_complexity Low_complexity 1 58 0 2 624 305 82 20 0 chr3L 5152054 5152103 -19391454 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 624 180 97 0 0 chr3L 5152417 5152448 -19391109 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 624 240 111 0 0 chr3L 5152695 5152731 -19390826 + (TTG)n Simple_repeat Simple_repeat 2 37 0 2 624 227 242 21 32 chr3L 5155735 5155829 -19387728 + A-rich Low_complexity Low_complexity 3 95 0 2 624 25 0 0 0 chr3L 5157360 5157385 -19386172 + AT_rich Low_complexity Low_complexity 1 25 0 2 624 21 36 0 0 chr3L 5159791 5159819 -19383738 + AT_rich Low_complexity Low_complexity 1 28 0 2 624 352 62 49 24 chr3L 5160174 5160256 -19383301 + (TTTTTG)n Simple_repeat Simple_repeat 6 89 0 2 624 34 55 0 0 chr3L 5160276 5160331 -19383226 + AT_rich Low_complexity Low_complexity 1 55 0 2 624 30 0 0 0 chr3L 5160547 5160577 -19382980 + AT_rich Low_complexity Low_complexity 1 30 0 2 624 210 37 0 0 chr3L 5161237 5161264 -19382293 + (T)n Simple_repeat Simple_repeat 1 27 0 2 624 200 208 0 0 chr3L 5165705 5165753 -19377804 + T-rich Low_complexity Low_complexity 1 48 0 2 624 264 130 0 0 chr3L 5166143 5166189 -19377368 + (AAATG)n Simple_repeat Simple_repeat 5 50 0 2 624 36 23 0 0 chr3L 5166485 5166528 -19377029 + AT_rich Low_complexity Low_complexity 1 43 0 2 624 29 60 0 0 chr3L 5168094 5168144 -19375413 + AT_rich Low_complexity Low_complexity 1 50 0 2 624 21 0 0 0 chr3L 5168425 5168446 -19375111 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 185 154 0 25 chr3L 5170283 5170323 -19373234 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 624 236 178 0 0 chr3L 5177327 5177372 -19366185 + CT-rich Low_complexity Low_complexity 2 46 0 2 624 204 40 0 0 chr3L 5178219 5178244 -19365313 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 624 191 152 22 0 chr3L 5183610 5183656 -19359901 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 624 180 185 0 0 chr3L 5186337 5186391 -19357166 + (CTG)n Simple_repeat Simple_repeat 2 55 0 2 624 183 80 0 0 chr3L 5186692 5186717 -19356840 + (GA)n Simple_repeat Simple_repeat 1 25 0 2 624 216 67 0 0 chr3L 5187759 5187789 -19355768 + (A)n Simple_repeat Simple_repeat 1 30 0 2 624 25 0 0 0 chr3L 5189364 5189389 -19354168 + AT_rich Low_complexity Low_complexity 1 25 0 2 624 25 31 0 0 chr3L 5190353 5190385 -19353172 + AT_rich Low_complexity Low_complexity 1 32 0 2 624 21 0 0 0 chr3L 5190509 5190530 -19353027 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 31 0 0 0 chr3L 5193077 5193108 -19350449 + AT_rich Low_complexity Low_complexity 1 31 0 2 624 252 130 0 0 chr3L 5194379 5194425 -19349132 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 624 236 30 0 29 chr3L 5194606 5194640 -19348917 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 624 22 35 0 0 chr3L 5196291 5196320 -19347237 + AT_rich Low_complexity Low_complexity 1 29 0 2 624 22 0 0 0 chr3L 5198440 5198462 -19345095 + AT_rich Low_complexity Low_complexity 1 22 0 2 624 218 204 20 0 chr3L 5198559 5198608 -19344949 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 624 248 278 14 0 chr3L 5201165 5201237 -19342320 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 624 180 0 0 0 chr3L 5203702 5203722 -19339835 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 624 201 121 0 0 chr3L 5203822 5203855 -19339702 + (T)n Simple_repeat Simple_repeat 1 33 0 2 624 239 237 0 0 chr3L 5204166 5204225 -19339332 + (TGAA)n Simple_repeat Simple_repeat 1 59 0 2 624 24 0 0 0 chr3L 5206437 5206461 -19337096 + AT_rich Low_complexity Low_complexity 1 24 0 2 624 183 156 0 0 chr3L 5206787 5206819 -19336738 + T-rich Low_complexity Low_complexity 1 32 0 2 624 28 29 0 0 chr3L 5207450 5207485 -19336072 + AT_rich Low_complexity Low_complexity 1 35 0 2 624 22 0 0 0 chr3L 5209255 5209277 -19334280 + AT_rich Low_complexity Low_complexity 1 22 0 2 624 214 236 0 0 chr3L 5210299 5210354 -19333203 + (CGA)n Simple_repeat Simple_repeat 2 56 0 2 624 204 277 12 65 chr3L 5212088 5212258 -19331299 + (CGG)n Simple_repeat Simple_repeat 2 162 0 2 624 243 0 0 0 chr3L 5213406 5213433 -19330124 + (A)n Simple_repeat Simple_repeat 1 27 0 2 624 22 0 0 0 chr3L 5214142 5214164 -19329393 + AT_rich Low_complexity Low_complexity 1 22 0 2 624 189 159 0 0 chr3L 5216104 5216148 -19327409 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 624 192 77 0 0 chr3L 5219351 5219377 -19324180 + (CAG)n Simple_repeat Simple_repeat 1 26 0 2 624 219 152 0 0 chr3L 5220607 5220653 -19322904 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 624 210 71 0 0 chr3L 5225466 5225494 -19318063 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 2 624 23 0 0 0 chr3L 5226256 5226279 -19317278 + AT_rich Low_complexity Low_complexity 1 23 0 2 624 24 0 0 0 chr3L 5226357 5226381 -19317176 + AT_rich Low_complexity Low_complexity 1 24 0 2 624 21 0 0 0 chr3L 5230761 5230782 -19312775 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 228 67 0 0 chr3L 5232593 5232623 -19310934 + (TATG)n Simple_repeat Simple_repeat 4 33 0 2 624 211 217 22 0 chr3L 5234624 5234670 -19308887 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 624 240 35 0 0 chr3L 5236068 5236097 -19307460 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 2 624 26 50 0 0 chr3L 5236536 5236576 -19306981 + AT_rich Low_complexity Low_complexity 1 40 0 2 624 213 220 0 0 chr3L 5240802 5240852 -19302705 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 625 33 0 0 0 chr3L 5244158 5244191 -19299366 + AT_rich Low_complexity Low_complexity 1 33 0 2 625 25 51 0 0 chr3L 5244216 5244255 -19299302 + AT_rich Low_complexity Low_complexity 1 39 0 2 625 26 82 0 0 chr3L 5244305 5244366 -19299191 + AT_rich Low_complexity Low_complexity 1 61 0 2 625 48 0 0 0 chr3L 5244997 5245045 -19298512 + AT_rich Low_complexity Low_complexity 1 48 0 2 625 201 121 0 0 chr3L 5245703 5245736 -19297821 + (T)n Simple_repeat Simple_repeat 1 33 0 2 625 203 184 0 0 chr3L 5246136 5246174 -19297383 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 625 198 0 0 0 chr3L 5250326 5250348 -19293209 + (A)n Simple_repeat Simple_repeat 1 22 0 2 625 213 65 0 0 chr3L 5251352 5251383 -19292174 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 2 625 260 229 35 46 chr3L 5251608 5251695 -19291862 + A-rich Low_complexity Low_complexity 4 89 0 2 625 180 77 0 0 chr3L 5252300 5252326 -19291231 + (T)n Simple_repeat Simple_repeat 1 26 0 2 625 245 262 0 15 chr3L 5252392 5252458 -19291099 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 625 180 0 0 0 chr3L 5253489 5253509 -19290048 + (CTG)n Simple_repeat Simple_repeat 3 22 0 2 625 186 71 0 0 chr3L 5253542 5253570 -19289987 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 625 216 250 0 0 chr3L 5256150 5256206 -19287351 + GA-rich Low_complexity Low_complexity 1 56 0 2 625 192 77 0 0 chr3L 5257809 5257835 -19285722 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 625 224 100 25 0 chr3L 5259529 5259569 -19283988 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 625 309 51 0 0 chr3L 5260159 5260198 -19283359 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 625 261 0 0 0 chr3L 5260943 5260972 -19282585 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 625 28 29 0 0 chr3L 5262897 5262932 -19280625 + AT_rich Low_complexity Low_complexity 1 35 0 2 625 272 133 0 16 chr3L 5263395 5263456 -19280101 + (CAGT)n Simple_repeat Simple_repeat 3 62 0 2 625 336 209 0 0 chr3L 5264652 5264757 -19278800 - ROO_I LTR Pao -7513 743 639 2 625 258 167 0 0 chr3L 5264846 5264906 -19278651 + (TGG)n Simple_repeat Simple_repeat 3 62 0 2 625 423 119 0 0 chr3L 5264988 5265055 -19278502 + (CTG)n Simple_repeat Simple_repeat 2 68 0 2 625 22 35 0 0 chr3L 5266843 5266872 -19276685 + AT_rich Low_complexity Low_complexity 1 29 0 2 625 198 0 0 0 chr3L 5267540 5267562 -19275995 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 625 183 146 0 0 chr3L 5268939 5268980 -19274577 + (ACTG)n Simple_repeat Simple_repeat 1 41 0 2 625 38 61 0 0 chr3L 5269648 5269714 -19273843 + AT_rich Low_complexity Low_complexity 1 66 0 2 625 194 143 20 0 chr3L 5270799 5270848 -19272709 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 625 23 78 0 0 chr3L 5271454 5271505 -19272052 + AT_rich Low_complexity Low_complexity 1 51 0 2 625 27 0 0 0 chr3L 5271763 5271790 -19271767 + AT_rich Low_complexity Low_complexity 1 27 0 2 625 25 31 0 0 chr3L 5271834 5271866 -19271691 + AT_rich Low_complexity Low_complexity 1 32 0 2 625 32 0 0 0 chr3L 5272170 5272202 -19271355 + AT_rich Low_complexity Low_complexity 1 32 0 2 625 243 0 0 0 chr3L 5274508 5274535 -19269022 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 625 252 0 0 0 chr3L 5275040 5275068 -19268489 + (TTTCC)n Simple_repeat Simple_repeat 4 31 0 2 625 23 54 0 0 chr3L 5275294 5275331 -19268226 + AT_rich Low_complexity Low_complexity 1 37 0 2 625 204 40 0 0 chr3L 5277064 5277089 -19266468 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 625 229 208 0 0 chr3L 5278247 5278295 -19265262 + (AACTG)n Simple_repeat Simple_repeat 4 51 0 2 625 210 171 0 0 chr3L 5279099 5279140 -19264417 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 625 192 200 0 0 chr3L 5280027 5280067 -19263490 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 625 22 0 0 0 chr3L 5280567 5280589 -19262968 + AT_rich Low_complexity Low_complexity 1 22 0 2 625 25 31 0 0 chr3L 5281969 5282001 -19261556 + AT_rich Low_complexity Low_complexity 1 32 0 2 625 291 150 0 0 chr3L 5282558 5282618 -19260939 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 625 383 125 0 14 chr3L 5284798 5284871 -19258686 + (CTG)n Simple_repeat Simple_repeat 2 73 0 2 625 25 75 0 0 chr3L 5285195 5285248 -19258309 + AT_rich Low_complexity Low_complexity 1 53 0 2 625 28 61 0 0 chr3L 5285482 5285531 -19258026 + AT_rich Low_complexity Low_complexity 1 49 0 2 625 24 0 0 0 chr3L 5290125 5290149 -19253408 + AT_rich Low_complexity Low_complexity 1 24 0 2 625 5694 0 0 0 chr3L 5292307 5292965 -19250592 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 625 50515 4 0 0 chr3L 5292965 5299027 -19244530 - QUASIMODO_I LTR Gypsy 0 6060 1 2 625 5694 0 0 0 chr3L 5299027 5299685 -19243872 - QUASIMODO_LTR LTR Gypsy 0 658 1 2 625 29 0 0 0 chr3L 5299717 5299746 -19243811 + AT_rich Low_complexity Low_complexity 1 29 0 2 625 27 0 0 0 chr3L 5300411 5300438 -19243119 + AT_rich Low_complexity Low_complexity 1 27 0 2 625 22 0 0 0 chr3L 5301849 5301871 -19241686 + AT_rich Low_complexity Low_complexity 1 22 0 2 625 21 0 0 0 chr3L 5302281 5302302 -19241255 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 21 0 0 0 chr3L 5302523 5302544 -19241013 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 23 33 0 0 chr3L 5303999 5304029 -19239528 + AT_rich Low_complexity Low_complexity 1 30 0 2 625 27 0 0 0 chr3L 5304113 5304140 -19239417 + AT_rich Low_complexity Low_complexity 1 27 0 2 625 21 36 0 0 chr3L 5304875 5304903 -19238654 + AT_rich Low_complexity Low_complexity 1 28 0 2 625 22 39 0 55 chr3L 5305123 5305178 -19238379 + AT_rich Low_complexity Low_complexity 1 52 0 2 625 276 130 0 0 chr3L 5306147 5306193 -19237364 + (CAT)n Simple_repeat Simple_repeat 2 47 0 2 625 279 278 9 36 chr3L 5306671 5306783 -19236774 + (CAA)n Simple_repeat Simple_repeat 1 109 0 2 625 24 0 0 0 chr3L 5307020 5307044 -19236513 + AT_rich Low_complexity Low_complexity 1 24 0 2 625 24 32 0 0 chr3L 5307083 5307114 -19236443 + AT_rich Low_complexity Low_complexity 1 31 0 2 625 25 0 0 0 chr3L 5307378 5307403 -19236154 + AT_rich Low_complexity Low_complexity 1 25 0 2 625 22 0 0 0 chr3L 5310468 5310490 -19233067 + AT_rich Low_complexity Low_complexity 1 22 0 2 625 205 51 51 0 chr3L 5311532 5311571 -19231986 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 625 28 0 0 0 chr3L 5312689 5312717 -19230840 + AT_rich Low_complexity Low_complexity 1 28 0 2 625 200 216 20 0 chr3L 5313006 5313057 -19230500 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 625 212 229 0 0 chr3L 5313796 5313844 -19229713 + G-rich Low_complexity Low_complexity 1 48 0 2 625 222 191 0 0 chr3L 5318978 5319025 -19224532 + (TCTG)n Simple_repeat Simple_repeat 1 47 0 2 625 192 97 0 0 chr3L 5321110 5321141 -19222416 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 625 225 200 0 0 chr3L 5321486 5321531 -19222026 + T-rich Low_complexity Low_complexity 1 45 0 2 625 189 74 0 0 chr3L 5323346 5323373 -19220184 + (GATTG)n Simple_repeat Simple_repeat 5 31 0 2 625 234 62 0 0 chr3L 5324511 5324543 -19219014 + (CAT)n Simple_repeat Simple_repeat 1 32 0 2 625 267 31 0 0 chr3L 5325415 5325447 -19218110 + (CAG)n Simple_repeat Simple_repeat 3 34 0 2 625 22 35 0 0 chr3L 5326335 5326364 -19217193 + AT_rich Low_complexity Low_complexity 1 29 0 2 625 27 0 0 0 chr3L 5330106 5330133 -19213424 + AT_rich Low_complexity Low_complexity 1 27 0 2 625 233 264 0 0 chr3L 5330317 5330389 -19213168 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 625 24 32 0 0 chr3L 5330859 5330890 -19212667 + AT_rich Low_complexity Low_complexity 1 31 0 2 625 31 44 0 0 chr3L 5330993 5331038 -19212519 + AT_rich Low_complexity Low_complexity 1 45 0 2 625 23 54 0 0 chr3L 5336415 5336452 -19207105 + AT_rich Low_complexity Low_complexity 1 37 0 2 625 21 0 0 0 chr3L 5338704 5338725 -19204832 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 198 0 0 0 chr3L 5348007 5348029 -19195528 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 625 21 0 0 0 chr3L 5349315 5349336 -19194221 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 25 0 0 0 chr3L 5349527 5349552 -19194005 + AT_rich Low_complexity Low_complexity 1 25 0 2 625 30 45 0 0 chr3L 5349705 5349749 -19193808 + AT_rich Low_complexity Low_complexity 1 44 0 2 625 58 38 0 0 chr3L 5352588 5352667 -19190890 + AT_rich Low_complexity Low_complexity 1 79 0 2 625 67 73 0 0 chr3L 5353095 5353232 -19190325 + AT_rich Low_complexity Low_complexity 1 137 0 2 625 183 42 0 0 chr3L 5356090 5356114 -19187443 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 625 33 56 0 0 chr3L 5356287 5356341 -19187216 + AT_rich Low_complexity Low_complexity 1 54 0 2 625 29 28 0 0 chr3L 5361055 5361091 -19182466 + AT_rich Low_complexity Low_complexity 1 36 0 2 625 32 81 0 0 chr3L 5361245 5361319 -19182238 + AT_rich Low_complexity Low_complexity 1 74 0 2 625 318 140 0 0 chr3L 5362479 5362536 -19181021 - DNAREP1_DM LINE Penelope 0 594 538 2 625 227 41 82 0 chr3L 5363364 5363413 -19180144 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 625 24 0 0 0 chr3L 5364686 5364710 -19178847 + AT_rich Low_complexity Low_complexity 1 24 0 2 625 255 170 0 0 chr3L 5365136 5365183 -19178374 + (CATA)n Simple_repeat Simple_repeat 1 47 0 2 625 221 304 0 35 chr3L 5367052 5367110 -19176447 + G-rich Low_complexity Low_complexity 1 56 0 2 625 21 0 0 0 chr3L 5369062 5369083 -19174474 + AT_rich Low_complexity Low_complexity 1 21 0 2 625 207 69 0 0 chr3L 5371356 5371385 -19172172 + (A)n Simple_repeat Simple_repeat 1 29 0 2 625 21 36 0 0 chr3L 5372206 5372234 -19171323 + AT_rich Low_complexity Low_complexity 1 28 0 2 626 22 35 0 0 chr3L 5386578 5386607 -19156950 + AT_rich Low_complexity Low_complexity 1 29 0 2 626 234 0 0 0 chr3L 5387015 5387041 -19156516 + (T)n Simple_repeat Simple_repeat 1 26 0 2 626 240 59 0 0 chr3L 5388439 5388473 -19155084 + (GTATG)n Simple_repeat Simple_repeat 5 38 0 2 626 216 0 0 0 chr3L 5390067 5390091 -19153466 + (GA)n Simple_repeat Simple_repeat 2 25 0 2 626 210 245 0 0 chr3L 5392307 5392360 -19151197 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 2 626 210 91 0 0 chr3L 5393151 5393184 -19150373 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 626 186 43 0 0 chr3L 5393852 5393875 -19149682 + (CAG)n Simple_repeat Simple_repeat 3 25 0 2 626 288 240 0 13 chr3L 5396143 5396219 -19147338 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 626 33 25 0 0 chr3L 5398251 5398291 -19145266 + AT_rich Low_complexity Low_complexity 1 40 0 2 626 32 43 0 0 chr3L 5399255 5399301 -19144256 + AT_rich Low_complexity Low_complexity 1 46 0 2 626 40 37 0 0 chr3L 5405029 5405083 -19138474 + AT_rich Low_complexity Low_complexity 1 54 0 2 626 243 281 0 0 chr3L 5406332 5406414 -19137143 + (CA)n Simple_repeat Simple_repeat 1 82 0 2 626 200 241 19 0 chr3L 5407864 5407918 -19135639 + (TTG)n Simple_repeat Simple_repeat 1 55 0 2 626 30 0 0 0 chr3L 5408137 5408167 -19135390 + AT_rich Low_complexity Low_complexity 1 30 0 2 626 23 0 0 0 chr3L 5410006 5410029 -19133528 + AT_rich Low_complexity Low_complexity 1 23 0 2 626 51 0 0 0 chr3L 5419101 5419152 -19124405 + AT_rich Low_complexity Low_complexity 1 51 0 2 626 198 71 0 0 chr3L 5419722 5419750 -19123807 + (CTG)n Simple_repeat Simple_repeat 1 28 0 2 626 29 0 0 0 chr3L 5420307 5420336 -19123221 + AT_rich Low_complexity Low_complexity 1 29 0 2 626 22 35 0 0 chr3L 5421062 5421091 -19122466 + AT_rich Low_complexity Low_complexity 1 29 0 2 626 26 50 0 0 chr3L 5421881 5421921 -19121636 + AT_rich Low_complexity Low_complexity 1 40 0 2 626 378 61 0 0 chr3L 5427161 5427210 -19116347 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 2 626 198 0 0 0 chr3L 5427852 5427874 -19115683 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 626 201 132 0 0 chr3L 5429781 5429819 -19113738 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 626 21 0 0 0 chr3L 5430184 5430205 -19113352 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 36 23 0 0 chr3L 5431310 5431353 -19112204 + AT_rich Low_complexity Low_complexity 1 43 0 2 626 24 32 0 0 chr3L 5433083 5433114 -19110443 + AT_rich Low_complexity Low_complexity 1 31 0 2 626 237 108 0 0 chr3L 5434050 5434087 -19109470 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2 626 241 89 44 0 chr3L 5436680 5436725 -19106832 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 626 22 0 0 0 chr3L 5439517 5439539 -19104018 + AT_rich Low_complexity Low_complexity 1 22 0 2 626 198 208 0 0 chr3L 5441111 5441164 -19102393 + (CAA)n Simple_repeat Simple_repeat 2 54 0 2 626 213 132 0 0 chr3L 5441211 5441249 -19102308 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 626 384 22 0 0 chr3L 5443679 5443724 -19099833 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 626 26 0 0 0 chr3L 5445610 5445636 -19097921 + AT_rich Low_complexity Low_complexity 1 26 0 2 626 2866 16 0 0 chr3L 5451215 5451536 -19092021 + MAX_LTR LTR Pao 1 321 0 2 626 73342 1 2 1 chr3L 5451536 5459438 -19084119 + MAX_I LTR Pao 1 7914 0 2 626 2866 16 0 0 chr3L 5459438 5459759 -19083798 + MAX_LTR LTR Pao 1 321 0 2 626 26 88 0 0 chr3L 5462037 5462105 -19081452 + AT_rich Low_complexity Low_complexity 1 68 0 2 626 228 224 0 0 chr3L 5463502 5463560 -19079997 + (ACTG)n Simple_repeat Simple_repeat 4 61 0 2 626 24 0 0 0 chr3L 5468084 5468108 -19075449 + AT_rich Low_complexity Low_complexity 1 24 0 2 626 183 42 0 0 chr3L 5468452 5468476 -19075081 + (A)n Simple_repeat Simple_repeat 1 24 0 2 626 222 312 0 0 chr3L 5470508 5470604 -19072953 + A-rich Low_complexity Low_complexity 1 96 0 2 626 229 296 0 0 chr3L 5474720 5474818 -19068739 + (CAA)n Simple_repeat Simple_repeat 3 100 0 2 626 224 265 0 30 chr3L 5475591 5475692 -19067865 + (CAA)n Simple_repeat Simple_repeat 1 98 0 2 626 324 315 0 0 chr3L 5476165 5476327 -19067230 + (CAA)n Simple_repeat Simple_repeat 2 163 0 2 626 394 320 0 0 chr3L 5476350 5476528 -19067029 + (CAA)n Simple_repeat Simple_repeat 1 178 0 2 626 27 29 0 0 chr3L 5476746 5476780 -19066777 + AT_rich Low_complexity Low_complexity 1 34 0 2 626 22 35 0 0 chr3L 5480334 5480363 -19063194 + AT_rich Low_complexity Low_complexity 1 29 0 2 626 21 0 0 0 chr3L 5481519 5481540 -19062017 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 521 250 23 17 chr3L 5482222 5482397 -19061160 - XDMR Unknown Unknown -185 176 1 2 626 535 289 31 34 chr3L 5482268 5482562 -19060995 + SAR_DM Satellite Satellite 588 880 -592 2 626 358 247 61 61 chr3L 5482397 5482595 -19060962 - XDMR Unknown Unknown 0 361 164 2 626 22 0 0 0 chr3L 5483970 5483992 -19059565 + AT_rich Low_complexity Low_complexity 1 22 0 2 626 189 0 0 0 chr3L 5492258 5492279 -19051278 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2 626 221 150 0 0 chr3L 5494666 5494706 -19048851 + (CTG)n Simple_repeat Simple_repeat 1 40 0 2 626 21 0 0 0 chr3L 5495102 5495123 -19048434 + AT_rich Low_complexity Low_complexity 1 21 0 2 626 22 35 0 0 chr3L 5495574 5495603 -19047954 + AT_rich Low_complexity Low_complexity 1 29 0 2 626 28 71 0 0 chr3L 5496051 5496107 -19047450 + AT_rich Low_complexity Low_complexity 1 56 0 2 626 26 50 0 0 chr3L 5496127 5496167 -19047390 + AT_rich Low_complexity Low_complexity 1 40 0 2 626 27 0 0 0 chr3L 5499783 5499810 -19043747 + AT_rich Low_complexity Low_complexity 1 27 0 2 626 194 62 31 0 chr3L 5500091 5500123 -19043434 + (TTACG)n Simple_repeat Simple_repeat 4 36 0 2 626 231 175 17 17 chr3L 5500135 5500193 -19043364 + A-rich Low_complexity Low_complexity 4 61 0 2 626 207 194 0 0 chr3L 5502415 5502451 -19041106 + (CATATA)n Simple_repeat Simple_repeat 4 39 0 2 626 198 0 0 0 chr3L 5504186 5504208 -19039349 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 626 192 77 0 0 chr3L 5504443 5504469 -19039088 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 627 216 206 15 31 chr3L 5505700 5505765 -19037792 + (TTTAA)n Simple_repeat Simple_repeat 3 66 0 2 627 21 0 0 0 chr3L 5513421 5513442 -19030115 + AT_rich Low_complexity Low_complexity 1 21 0 2 627 203 171 0 0 chr3L 5522560 5522601 -19020956 + T-rich Low_complexity Low_complexity 1 41 0 2 627 189 0 0 0 chr3L 5526081 5526102 -19017455 + (TA)n Simple_repeat Simple_repeat 2 22 0 2 627 184 137 19 19 chr3L 5529308 5529360 -19014197 + A-rich Low_complexity Low_complexity 5 56 0 2 627 21 57 0 0 chr3L 5530474 5530509 -19013048 + AT_rich Low_complexity Low_complexity 1 35 0 2 627 2007 0 0 51 chr3L 5530882 5531158 -19012399 - LINEJ1_DM LINE Jockey 0 5020 4759 2 627 23 33 0 0 chr3L 5531506 5531536 -19012021 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 269 276 45 0 chr3L 5533724 5533858 -19009699 + (CCGGG)n Simple_repeat Simple_repeat 3 142 0 2 627 257 231 13 13 chr3L 5534899 5534978 -19008579 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 627 261 397 0 0 chr3L 5535831 5535987 -19007570 + (CCG)n Simple_repeat Simple_repeat 2 157 0 2 627 205 131 64 21 chr3L 5537069 5537116 -19006441 + (GTTTG)n Simple_repeat Simple_repeat 5 53 0 2 627 200 59 29 0 chr3L 5537658 5537692 -19005865 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 627 207 69 0 0 chr3L 5543357 5543386 -19000171 + (TTA)n Simple_repeat Simple_repeat 1 29 0 2 627 198 128 0 0 chr3L 5544392 5544431 -18999126 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 627 50 65 0 0 chr3L 5545563 5545655 -18997902 + AT_rich Low_complexity Low_complexity 1 92 0 2 627 25 31 0 0 chr3L 5546318 5546350 -18997207 + AT_rich Low_complexity Low_complexity 1 32 0 2 627 21 0 0 0 chr3L 5546405 5546426 -18997131 + AT_rich Low_complexity Low_complexity 1 21 0 2 627 243 61 0 0 chr3L 5546813 5546846 -18996711 + (AGATG)n Simple_repeat Simple_repeat 1 33 0 2 627 23 0 0 0 chr3L 5548346 5548369 -18995188 + AT_rich Low_complexity Low_complexity 1 23 0 2 627 27 62 0 0 chr3L 5551089 5551137 -18992420 + AT_rich Low_complexity Low_complexity 1 48 0 2 627 35 71 0 0 chr3L 5554764 5554834 -18988723 + AT_rich Low_complexity Low_complexity 1 70 0 2 627 22 35 0 0 chr3L 5556116 5556145 -18987412 + AT_rich Low_complexity Low_complexity 1 29 0 2 627 31 0 0 0 chr3L 5558197 5558228 -18985329 + AT_rich Low_complexity Low_complexity 1 31 0 2 627 277 204 0 61 chr3L 5561048 5561147 -18982410 + (CTG)n Simple_repeat Simple_repeat 1 93 0 2 627 291 300 0 0 chr3L 5561377 5561507 -18982050 + (CTG)n Simple_repeat Simple_repeat 1 130 0 2 627 27 29 0 0 chr3L 5562163 5562197 -18981360 + AT_rich Low_complexity Low_complexity 1 34 0 2 627 25 0 0 0 chr3L 5562739 5562764 -18980793 + AT_rich Low_complexity Low_complexity 1 25 0 2 627 21 0 0 0 chr3L 5563089 5563110 -18980447 + AT_rich Low_complexity Low_complexity 1 21 0 2 627 501 84 0 0 chr3L 5565279 5565350 -18978207 + (CAG)n Simple_repeat Simple_repeat 1 71 0 2 627 255 61 0 0 chr3L 5567917 5567950 -18975607 + (CTACT)n Simple_repeat Simple_repeat 3 35 0 2 627 216 0 0 0 chr3L 5568247 5568271 -18975286 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 627 21 0 0 0 chr3L 5571635 5571656 -18971901 + AT_rich Low_complexity Low_complexity 1 21 0 2 627 235 225 0 48 chr3L 5573015 5573099 -18970458 + A-rich Low_complexity Low_complexity 2 81 0 2 627 22 109 0 0 chr3L 5574312 5574404 -18969153 + AT_rich Low_complexity Low_complexity 1 92 0 2 627 25 51 0 0 chr3L 5574525 5574564 -18968993 + AT_rich Low_complexity Low_complexity 1 39 0 2 627 24 32 0 0 chr3L 5575980 5576011 -18967546 + AT_rich Low_complexity Low_complexity 1 31 0 2 627 26 30 0 0 chr3L 5581925 5581958 -18961599 + AT_rich Low_complexity Low_complexity 1 33 0 2 627 24 32 0 0 chr3L 5583120 5583151 -18960406 + AT_rich Low_complexity Low_complexity 1 31 0 2 627 23 0 0 0 chr3L 5583668 5583691 -18959866 + AT_rich Low_complexity Low_complexity 1 23 0 2 627 25 0 0 0 chr3L 5587872 5587897 -18955660 + AT_rich Low_complexity Low_complexity 1 25 0 2 627 23 33 0 0 chr3L 5591713 5591743 -18951814 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 22 35 0 0 chr3L 5597615 5597644 -18945913 + AT_rich Low_complexity Low_complexity 1 29 0 2 627 268 229 0 0 chr3L 5602436 5602497 -18941060 + (ACTG)n Simple_repeat Simple_repeat 1 61 0 2 627 22 35 0 0 chr3L 5602800 5602829 -18940728 + AT_rich Low_complexity Low_complexity 1 29 0 2 627 29 84 0 0 chr3L 5603558 5603629 -18939928 + AT_rich Low_complexity Low_complexity 1 71 0 2 627 25 31 0 0 chr3L 5606469 5606501 -18937056 + AT_rich Low_complexity Low_complexity 1 32 0 2 627 22 56 0 0 chr3L 5606659 5606695 -18936862 + AT_rich Low_complexity Low_complexity 1 36 0 2 627 192 135 0 0 chr3L 5606915 5606952 -18936605 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 627 201 121 0 0 chr3L 5607952 5607985 -18935572 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2 627 21 36 0 0 chr3L 5609408 5609436 -18934121 + AT_rich Low_complexity Low_complexity 1 28 0 2 627 209 220 17 0 chr3L 5609768 5609827 -18933730 + (CTG)n Simple_repeat Simple_repeat 1 60 0 2 627 202 200 0 0 chr3L 5611829 5611869 -18931688 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 627 215 146 24 0 chr3L 5612093 5612134 -18931423 + CT-rich Low_complexity Low_complexity 4 45 0 2 627 189 74 0 0 chr3L 5612697 5612724 -18930833 + (T)n Simple_repeat Simple_repeat 1 27 0 2 627 207 195 0 49 chr3L 5618486 5618567 -18924990 + (TTG)n Simple_repeat Simple_repeat 3 79 0 2 627 213 200 44 0 chr3L 5619269 5619314 -18924243 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 2 627 235 267 0 0 chr3L 5619963 5620023 -18923534 + ROO_I LTR Pao 653 712 -7544 2 627 180 125 0 0 chr3L 5620862 5620894 -18922663 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2 627 217 182 23 0 chr3L 5623010 5623054 -18920503 + A-rich Low_complexity Low_complexity 2 46 0 2 627 24 32 0 0 chr3L 5623574 5623605 -18919952 + AT_rich Low_complexity Low_complexity 1 31 0 2 627 204 236 0 18 chr3L 5623748 5623804 -18919753 + GA-rich Low_complexity Low_complexity 1 55 0 2 627 206 32 32 0 chr3L 5625485 5625516 -18918041 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 627 201 39 0 0 chr3L 5626486 5626512 -18917045 + (CAG)n Simple_repeat Simple_repeat 2 27 0 2 627 192 152 0 0 chr3L 5627450 5627483 -18916074 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 627 23 33 0 0 chr3L 5629222 5629252 -18914305 + AT_rich Low_complexity Low_complexity 1 30 0 2 627 453 116 0 0 chr3L 5629830 5629899 -18913658 + (CAGTT)n Simple_repeat Simple_repeat 1 69 0 2 627 198 103 0 0 chr3L 5630239 5630268 -18913289 + (CAGAGA)n Simple_repeat Simple_repeat 1 29 0 2 627 200 209 23 0 chr3L 5630428 5630471 -18913086 + (TCG)n Simple_repeat Simple_repeat 2 45 0 2 627 203 158 0 0 chr3L 5630963 5631001 -18912556 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 627 192 40 0 0 chr3L 5633248 5633273 -18910284 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 627 189 0 0 0 chr3L 5633457 5633478 -18910079 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 627 252 225 14 27 chr3L 5634158 5634231 -18909326 + (CATA)n Simple_repeat Simple_repeat 1 72 0 2 627 204 67 0 0 chr3L 5634538 5634568 -18908989 + (T)n Simple_repeat Simple_repeat 1 30 0 2 628 21 0 0 0 chr3L 5636704 5636725 -18906832 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 215 316 0 0 chr3L 5637404 5637499 -18906058 + C-rich Low_complexity Low_complexity 5 99 0 2 628 24 85 0 0 chr3L 5638553 5638612 -18904945 + AT_rich Low_complexity Low_complexity 1 59 0 2 628 243 133 0 0 chr3L 5639043 5639088 -18904469 + (GGA)n Simple_repeat Simple_repeat 1 45 0 2 628 243 133 0 0 chr3L 5641551 5641596 -18901961 + (CAG)n Simple_repeat Simple_repeat 1 45 0 2 628 207 100 0 0 chr3L 5641754 5641784 -18901773 + (CAG)n Simple_repeat Simple_repeat 3 32 0 2 628 186 43 0 0 chr3L 5642004 5642027 -18901530 + (CAGA)n Simple_repeat Simple_repeat 3 25 0 2 628 25 31 0 0 chr3L 5642273 5642305 -18901252 + AT_rich Low_complexity Low_complexity 1 32 0 2 628 180 0 0 0 chr3L 5642486 5642506 -18901051 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 2 628 290 198 47 0 chr3L 5642681 5642767 -18900790 + (TA)n Simple_repeat Simple_repeat 1 90 0 2 628 195 186 0 0 chr3L 5642883 5642926 -18900631 + (TTA)n Simple_repeat Simple_repeat 1 43 0 2 628 21 0 0 0 chr3L 5643085 5643106 -18900451 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 25 0 0 0 chr3L 5643296 5643321 -18900236 + AT_rich Low_complexity Low_complexity 1 25 0 2 628 22 0 0 0 chr3L 5643887 5643909 -18899648 + AT_rich Low_complexity Low_complexity 1 22 0 2 628 294 169 0 0 chr3L 5644464 5644529 -18899028 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 628 252 0 0 0 chr3L 5649024 5649052 -18894505 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2 628 21 0 0 0 chr3L 5649640 5649661 -18893896 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 212 245 0 0 chr3L 5650819 5650868 -18892689 + CT-rich Low_complexity Low_complexity 2 50 0 2 628 214 173 27 0 chr3L 5651536 5651611 -18891946 + (CA)n Simple_repeat Simple_repeat 1 77 0 2 628 186 118 0 0 chr3L 5651747 5651781 -18891776 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 628 22 35 0 0 chr3L 5655507 5655536 -18888021 + AT_rich Low_complexity Low_complexity 1 29 0 2 628 252 0 0 0 chr3L 5657646 5657674 -18885883 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 628 183 129 0 0 chr3L 5658543 5658574 -18884983 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 628 23 54 0 0 chr3L 5660263 5660300 -18883257 + AT_rich Low_complexity Low_complexity 1 37 0 2 628 24 0 0 0 chr3L 5662305 5662329 -18881228 + AT_rich Low_complexity Low_complexity 1 24 0 2 628 295 256 0 0 chr3L 5662497 5662587 -18880970 + (CCA)n Simple_repeat Simple_repeat 2 91 0 2 628 210 301 0 0 chr3L 5662656 5662729 -18880828 + (ATG)n Simple_repeat Simple_repeat 1 73 0 2 628 231 114 0 0 chr3L 5662729 5662764 -18880793 + (TAA)n Simple_repeat Simple_repeat 3 37 0 2 628 239 176 20 0 chr3L 5664440 5664491 -18879066 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 628 252 0 0 0 chr3L 5666432 5666460 -18877097 + (GA)n Simple_repeat Simple_repeat 2 29 0 2 628 240 113 0 53 chr3L 5669008 5669083 -18874474 + (CAA)n Simple_repeat Simple_repeat 2 72 0 2 628 289 75 19 19 chr3L 5670776 5670830 -18872727 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 628 189 0 0 0 chr3L 5670986 5671007 -18872550 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 628 234 91 0 0 chr3L 5671158 5671191 -18872366 + (ATG)n Simple_repeat Simple_repeat 3 35 0 2 628 216 0 0 0 chr3L 5671192 5671216 -18872341 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 628 271 236 27 14 chr3L 5671766 5671839 -18871718 + (CGTG)n Simple_repeat Simple_repeat 4 77 0 2 628 237 83 0 0 chr3L 5672035 5672071 -18871486 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 628 256 246 14 0 chr3L 5672766 5672835 -18870722 + (TG)n Simple_repeat Simple_repeat 2 71 0 2 628 21 71 0 0 chr3L 5673780 5673822 -18869735 + AT_rich Low_complexity Low_complexity 1 42 0 2 628 234 0 0 0 chr3L 5675673 5675699 -18867858 + (CTG)n Simple_repeat Simple_repeat 3 28 0 2 628 197 65 0 31 chr3L 5676920 5676952 -18866605 + (TTTCG)n Simple_repeat Simple_repeat 3 33 0 2 628 254 224 0 0 chr3L 5679582 5679631 -18863926 + C-rich Low_complexity Low_complexity 2 50 0 2 628 192 40 0 0 chr3L 5681249 5681274 -18862283 + (A)n Simple_repeat Simple_repeat 1 25 0 2 628 202 254 17 0 chr3L 5682545 5682604 -18860953 + (TA)n Simple_repeat Simple_repeat 1 60 0 2 628 222 224 0 0 chr3L 5682738 5682787 -18860770 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 628 204 135 0 0 chr3L 5682876 5682913 -18860644 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 628 192 152 0 0 chr3L 5683761 5683794 -18859763 + (TTG)n Simple_repeat Simple_repeat 2 34 0 2 628 217 159 23 0 chr3L 5683885 5683929 -18859628 + CT-rich Low_complexity Low_complexity 1 45 0 2 628 203 167 0 0 chr3L 5684429 5684465 -18859092 + GA-rich Low_complexity Low_complexity 2 37 0 2 628 245 135 0 19 chr3L 5684733 5684786 -18858771 + (TATCG)n Simple_repeat Simple_repeat 3 54 0 2 628 186 103 0 0 chr3L 5685483 5685512 -18858045 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 628 21 0 0 0 chr3L 5685919 5685940 -18857617 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 200 171 0 47 chr3L 5687581 5687624 -18855933 + (TATG)n Simple_repeat Simple_repeat 1 41 0 2 628 183 129 0 0 chr3L 5689019 5689050 -18854507 + (TGG)n Simple_repeat Simple_repeat 2 32 0 2 628 348 103 0 0 chr3L 5696393 5696451 -18847106 + (CAGT)n Simple_repeat Simple_repeat 4 61 0 2 628 207 149 64 0 chr3L 5696704 5696751 -18846806 + (CAG)n Simple_repeat Simple_repeat 1 50 0 2 628 24 0 0 0 chr3L 5697699 5697723 -18845834 + AT_rich Low_complexity Low_complexity 1 24 0 2 628 208 100 0 91 chr3L 5698366 5698421 -18845136 + (GGTTG)n Simple_repeat Simple_repeat 3 52 0 2 628 219 125 0 0 chr3L 5702903 5702943 -18840614 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 628 22 0 0 0 chr3L 5703530 5703552 -18840005 + AT_rich Low_complexity Low_complexity 1 22 0 2 628 234 105 0 0 chr3L 5704579 5704617 -18838940 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 628 21 0 0 0 chr3L 5706254 5706275 -18837282 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 258 32 0 0 chr3L 5708436 5708467 -18835090 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 628 354 61 0 0 chr3L 5710199 5710248 -18833309 + (ACTG)n Simple_repeat Simple_repeat 4 52 0 2 628 240 216 0 0 chr3L 5711244 5711295 -18832262 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 628 228 35 0 0 chr3L 5712114 5712143 -18831414 + (A)n Simple_repeat Simple_repeat 1 29 0 2 628 189 132 0 0 chr3L 5713330 5713368 -18830189 + (CAG)n Simple_repeat Simple_repeat 2 39 0 2 628 252 290 0 0 chr3L 5713876 5713945 -18829612 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 628 180 125 0 0 chr3L 5716190 5716222 -18827335 + (GGA)n Simple_repeat Simple_repeat 3 34 0 2 628 245 242 0 0 chr3L 5719198 5719260 -18824297 + (CAG)n Simple_repeat Simple_repeat 3 64 0 2 628 318 50 0 0 chr3L 5719709 5719749 -18823808 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 628 209 189 0 0 chr3L 5722113 5722150 -18821407 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 628 261 0 0 0 chr3L 5722466 5722495 -18821062 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 628 255 221 0 14 chr3L 5722548 5722617 -18820940 + ROO_I LTR Pao 701 768 -7488 2 628 21 36 0 0 chr3L 5722650 5722678 -18820879 + AT_rich Low_complexity Low_complexity 1 28 0 2 628 189 74 0 0 chr3L 5724407 5724434 -18819123 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 628 264 148 67 11 chr3L 5727421 5727510 -18816047 + (CAA)n Simple_repeat Simple_repeat 1 94 0 2 628 230 225 0 0 chr3L 5728192 5728232 -18815325 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 2 628 195 184 0 0 chr3L 5729987 5730025 -18813532 + (CAG)n Simple_repeat Simple_repeat 1 38 0 2 628 29 28 0 0 chr3L 5732143 5732179 -18811378 + AT_rich Low_complexity Low_complexity 1 36 0 2 628 270 81 0 0 chr3L 5732572 5732609 -18810948 + (CAG)n Simple_repeat Simple_repeat 1 37 0 2 628 225 94 0 0 chr3L 5734980 5735012 -18808545 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 628 198 0 0 0 chr3L 5736078 5736100 -18807457 + (CAG)n Simple_repeat Simple_repeat 2 23 0 2 628 183 80 0 0 chr3L 5736933 5736958 -18806599 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 628 208 204 0 36 chr3L 5737237 5737293 -18806264 + (CATATA)n Simple_repeat Simple_repeat 2 55 0 2 628 229 0 54 27 chr3L 5737570 5737607 -18805950 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 2 628 270 106 0 0 chr3L 5738408 5738455 -18805102 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 628 23 0 0 0 chr3L 5739007 5739030 -18804527 + AT_rich Low_complexity Low_complexity 1 23 0 2 628 284 0 28 0 chr3L 5742315 5742351 -18801206 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 628 189 0 0 0 chr3L 5743460 5743481 -18800076 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 628 195 42 0 0 chr3L 5743647 5743671 -18799886 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 628 184 73 98 0 chr3L 5745873 5745914 -18797643 + (TATAA)n Simple_repeat Simple_repeat 5 49 0 2 628 215 214 0 0 chr3L 5748733 5748775 -18794782 + (ATGGTG)n Simple_repeat Simple_repeat 2 43 0 2 628 249 119 0 0 chr3L 5748914 5748956 -18794601 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 628 25 51 0 0 chr3L 5749206 5749245 -18794312 + AT_rich Low_complexity Low_complexity 1 39 0 2 628 21 0 0 0 chr3L 5761981 5762002 -18781555 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 195 42 0 0 chr3L 5763854 5763878 -18779679 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 2 629 25 0 0 0 chr3L 5777766 5777791 -18765766 + AT_rich Low_complexity Low_complexity 1 25 0 2 629 21 36 0 0 chr3L 5778142 5778170 -18765387 + AT_rich Low_complexity Low_complexity 1 28 0 2 629 198 71 0 0 chr3L 5778321 5778349 -18765208 + (TATG)n Simple_repeat Simple_repeat 4 31 0 2 629 219 139 0 0 chr3L 5778652 5778688 -18764869 + (CATA)n Simple_repeat Simple_repeat 1 36 0 2 629 25 0 0 0 chr3L 5781779 5781804 -18761753 + AT_rich Low_complexity Low_complexity 1 25 0 2 629 25 51 0 0 chr3L 5790633 5790672 -18752885 + AT_rich Low_complexity Low_complexity 1 39 0 2 629 209 146 0 77 chr3L 5792275 5792327 -18751230 + T-rich Low_complexity Low_complexity 6 53 0 2 629 206 246 14 14 chr3L 5792562 5792632 -18750925 + (CTTTA)n Simple_repeat Simple_repeat 1 70 0 2 629 207 182 0 0 chr3L 5793271 5793315 -18750242 + CT-rich Low_complexity Low_complexity 3 46 0 2 629 216 0 0 0 chr3L 5793406 5793430 -18750127 + (T)n Simple_repeat Simple_repeat 1 24 0 2 629 247 282 9 18 chr3L 5796210 5796322 -18747235 + (CAG)n Simple_repeat Simple_repeat 3 113 0 2 629 242 277 12 0 chr3L 5803761 5803844 -18739713 + (CA)n Simple_repeat Simple_repeat 2 85 0 2 629 243 191 14 29 chr3L 5806831 5806901 -18736656 + T-rich Low_complexity Low_complexity 2 70 0 2 629 24 0 0 0 chr3L 5806946 5806970 -18736587 + AT_rich Low_complexity Low_complexity 1 24 0 2 629 236 91 23 0 chr3L 5807165 5807209 -18736348 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 629 21 0 0 0 chr3L 5807519 5807540 -18736017 + AT_rich Low_complexity Low_complexity 1 21 0 2 629 30 0 0 0 chr3L 5807976 5808006 -18735551 + AT_rich Low_complexity Low_complexity 1 30 0 2 629 218 200 0 0 chr3L 5808317 5808367 -18735190 + A-rich Low_complexity Low_complexity 1 50 0 2 629 197 100 50 0 chr3L 5808896 5808936 -18734621 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2 629 24 53 0 0 chr3L 5809092 5809130 -18734427 + AT_rich Low_complexity Low_complexity 1 38 0 2 629 215 259 0 45 chr3L 5809482 5809571 -18733986 + T-rich Low_complexity Low_complexity 2 86 0 2 629 200 143 24 0 chr3L 5809586 5809628 -18733929 + (ATTTG)n Simple_repeat Simple_repeat 2 44 0 2 629 268 284 0 0 chr3L 5812829 5812903 -18730654 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 629 200 194 0 0 chr3L 5814282 5814318 -18729239 + (TATATG)n Simple_repeat Simple_repeat 4 39 0 2 629 279 286 0 0 chr3L 5817128 5817198 -18726359 + (TTG)n Simple_repeat Simple_repeat 2 71 0 2 629 242 74 0 69 chr3L 5817345 5817403 -18726154 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 2 629 25 31 0 0 chr3L 5817827 5817859 -18725698 + AT_rich Low_complexity Low_complexity 1 32 0 2 629 205 184 0 0 chr3L 5818967 5819005 -18724552 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 2 629 183 139 0 0 chr3L 5820096 5820132 -18723425 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 2 629 242 224 0 0 chr3L 5822755 5822813 -18720744 + T-rich Low_complexity Low_complexity 1 58 0 2 629 189 154 0 0 chr3L 5824115 5824154 -18719403 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 629 201 39 0 0 chr3L 5825055 5825081 -18718476 + (CAAAAA)n Simple_repeat Simple_repeat 4 29 0 2 629 207 161 0 0 chr3L 5827335 5827366 -18716191 + (CTG)n Simple_repeat Simple_repeat 3 33 0 2 629 309 89 0 0 chr3L 5827827 5827872 -18715685 + (CAG)n Simple_repeat Simple_repeat 3 47 0 2 629 234 116 0 0 chr3L 5828639 5828682 -18714875 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 629 216 0 0 0 chr3L 5830698 5830722 -18712835 + (CTATA)n Simple_repeat Simple_repeat 2 25 0 2 629 197 108 27 0 chr3L 5831352 5831389 -18712168 + (CTG)n Simple_repeat Simple_repeat 1 38 0 2 629 201 132 0 0 chr3L 5831927 5831965 -18711592 + (A)n Simple_repeat Simple_repeat 1 38 0 2 629 201 39 0 0 chr3L 5832291 5832317 -18711240 + (CACAA)n Simple_repeat Simple_repeat 4 29 0 2 629 252 149 0 0 chr3L 5833634 5833681 -18709876 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 629 219 88 0 0 chr3L 5834455 5834489 -18709068 + (CAA)n Simple_repeat Simple_repeat 3 36 0 2 629 189 0 0 0 chr3L 5834879 5834900 -18708657 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 629 234 141 89 13 chr3L 5835742 5835821 -18707736 - ROO_I LTR Pao -7528 728 644 2 629 201 217 16 32 chr3L 5835854 5835916 -18707641 + (CTG)n Simple_repeat Simple_repeat 3 63 0 2 629 267 31 0 0 chr3L 5836184 5836216 -18707341 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2 629 195 162 0 0 chr3L 5836363 5836400 -18707157 + (CTG)n Simple_repeat Simple_repeat 2 38 0 2 629 261 83 0 0 chr3L 5836497 5836533 -18707024 + (CTG)n Simple_repeat Simple_repeat 3 38 0 2 629 479 60 23 23 chr3L 5836720 5836806 -18706751 + (CTG)n Simple_repeat Simple_repeat 1 86 0 2 629 249 163 0 0 chr3L 5837063 5837112 -18706445 + (CTG)n Simple_repeat Simple_repeat 2 50 0 2 629 205 167 0 0 chr3L 5837419 5837455 -18706102 + (CTG)n Simple_repeat Simple_repeat 2 37 0 2 629 303 161 0 0 chr3L 5837616 5837672 -18705885 + (ATG)n Simple_repeat Simple_repeat 1 56 0 2 629 183 42 0 0 chr3L 5841764 5841788 -18701769 + (GGAAA)n Simple_repeat Simple_repeat 3 26 0 2 629 216 0 0 0 chr3L 5841832 5841856 -18701701 + (GCTG)n Simple_repeat Simple_repeat 1 24 0 2 629 234 300 0 12 chr3L 5842051 5842132 -18701425 + (TCTG)n Simple_repeat Simple_repeat 4 83 0 2 629 22 35 0 0 chr3L 5842503 5842532 -18701025 + AT_rich Low_complexity Low_complexity 1 29 0 2 629 189 107 0 0 chr3L 5843056 5843084 -18700473 + (CGAGT)n Simple_repeat Simple_repeat 2 29 0 2 629 36 82 0 0 chr3L 5843222 5843307 -18700250 + AT_rich Low_complexity Low_complexity 1 85 0 2 629 257 135 0 19 chr3L 5844462 5844515 -18699042 + (CCA)n Simple_repeat Simple_repeat 2 53 0 2 629 205 258 0 0 chr3L 5845660 5845726 -18697831 + T-rich Low_complexity Low_complexity 1 66 0 2 629 242 228 0 0 chr3L 5846073 5846130 -18697427 + T-rich Low_complexity Low_complexity 1 57 0 2 629 210 71 0 0 chr3L 5846329 5846357 -18697200 + (CGGT)n Simple_repeat Simple_repeat 4 31 0 2 629 258 32 0 0 chr3L 5849197 5849228 -18694329 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 629 213 159 0 0 chr3L 5852082 5852126 -18691431 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 629 245 232 0 35 chr3L 5853542 5853627 -18689930 + ROO_I LTR Pao 664 745 -7511 2 629 207 0 0 0 chr3L 5853699 5853722 -18689835 + (CTTTA)n Simple_repeat Simple_repeat 4 26 0 2 629 225 132 0 0 chr3L 5853734 5853772 -18689785 + (CAG)n Simple_repeat Simple_repeat 1 38 0 2 629 228 122 0 0 chr3L 5853855 5853896 -18689661 + (AAGTG)n Simple_repeat Simple_repeat 5 45 0 2 629 306 0 0 0 chr3L 5858995 5859029 -18684528 + (CGA)n Simple_repeat Simple_repeat 1 34 0 2 629 288 53 0 0 chr3L 5859744 5859782 -18683775 + (CAG)n Simple_repeat Simple_repeat 1 38 0 2 629 183 184 0 0 chr3L 5860423 5860461 -18683096 + (CAA)n Simple_repeat Simple_repeat 1 38 0 2 629 291 54 0 0 chr3L 5862206 5862243 -18681314 + (CAT)n Simple_repeat Simple_repeat 1 37 0 2 629 180 0 0 0 chr3L 5862471 5862491 -18681066 + (TATATG)n Simple_repeat Simple_repeat 4 23 0 2 629 24 32 0 0 chr3L 5862700 5862731 -18680826 + AT_rich Low_complexity Low_complexity 1 31 0 2 629 24 32 0 0 chr3L 5863037 5863068 -18680489 + AT_rich Low_complexity Low_complexity 1 31 0 2 629 221 159 15 31 chr3L 5866456 5866521 -18677036 + T-rich Low_complexity Low_complexity 6 69 0 2 629 209 222 0 0 chr3L 5868980 5869025 -18674532 + (CAA)n Simple_repeat Simple_repeat 1 45 0 2 629 32 57 0 0 chr3L 5871243 5871296 -18672261 + AT_rich Low_complexity Low_complexity 1 53 0 2 629 24 0 0 0 chr3L 5871370 5871394 -18672163 + AT_rich Low_complexity Low_complexity 1 24 0 2 629 244 216 0 0 chr3L 5873822 5873873 -18669684 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 629 216 0 0 0 chr3L 5874356 5874380 -18669177 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 629 207 300 12 0 chr3L 5875121 5875201 -18668356 + GA-rich Low_complexity Low_complexity 1 81 0 2 629 221 222 0 0 chr3L 5880481 5880526 -18663031 + (CTGGGG)n Simple_repeat Simple_repeat 2 46 0 2 629 22 35 0 0 chr3L 5892490 5892519 -18651038 + AT_rich Low_complexity Low_complexity 1 29 0 2 630 1711 0 0 0 chr3L 5903185 5903371 -18640186 + POGON1 DNA Pogo 1 186 0 2 630 23 0 0 0 chr3L 5906964 5906987 -18636570 + AT_rich Low_complexity Low_complexity 1 23 0 2 630 22 35 0 0 chr3L 5910164 5910193 -18633364 + AT_rich Low_complexity Low_complexity 1 29 0 2 630 21 0 0 0 chr3L 5910640 5910661 -18632896 + AT_rich Low_complexity Low_complexity 1 21 0 2 630 32 0 0 0 chr3L 5913866 5913898 -18629659 + AT_rich Low_complexity Low_complexity 1 32 0 2 630 861 35 0 0 chr3L 5919487 5919601 -18623956 - BS LINE Jockey 0 5126 5013 2 630 28 0 0 0 chr3L 5927111 5927139 -18616418 + AT_rich Low_complexity Low_complexity 1 28 0 2 630 27 49 0 0 chr3L 5934427 5934468 -18609089 + AT_rich Low_complexity Low_complexity 1 41 0 2 630 246 160 0 0 chr3L 5936810 5936860 -18606697 + T-rich Low_complexity Low_complexity 1 50 0 2 630 312 27 0 0 chr3L 5941120 5941157 -18602400 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 630 200 167 0 0 chr3L 5941851 5941881 -18601676 + (CTG)n Simple_repeat Simple_repeat 2 31 0 2 630 215 203 16 0 chr3L 5943807 5943871 -18599686 + (CAG)n Simple_repeat Simple_repeat 1 65 0 2 630 186 171 0 0 chr3L 5945477 5945518 -18598039 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 630 234 0 0 0 chr3L 5945949 5945975 -18597582 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 630 22 35 0 0 chr3L 5947111 5947140 -18596417 + AT_rich Low_complexity Low_complexity 1 29 0 2 630 231 146 0 0 chr3L 5947293 5947334 -18596223 + (CTG)n Simple_repeat Simple_repeat 1 41 0 2 630 204 97 0 0 chr3L 5947480 5947511 -18596046 + (CTG)n Simple_repeat Simple_repeat 2 32 0 2 630 247 176 28 64 chr3L 5948177 5948286 -18595271 + ROO_I LTR Pao 639 743 -7513 2 630 189 0 0 0 chr3L 5948541 5948562 -18594995 + (ACTG)n Simple_repeat Simple_repeat 1 21 0 2 630 248 235 0 14 chr3L 5949927 5949996 -18593561 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 630 234 81 0 0 chr3L 5952703 5952740 -18590817 + (CAATC)n Simple_repeat Simple_repeat 5 41 0 2 630 36 0 0 0 chr3L 5954139 5954175 -18589382 + AT_rich Low_complexity Low_complexity 1 36 0 2 630 189 159 0 0 chr3L 5961585 5961629 -18581928 + (CTG)n Simple_repeat Simple_repeat 3 46 0 2 630 21 0 0 0 chr3L 5966528 5966549 -18577008 + AT_rich Low_complexity Low_complexity 1 21 0 2 630 27 49 0 0 chr3L 5966588 5966629 -18576928 + AT_rich Low_complexity Low_complexity 1 41 0 2 630 228 260 0 0 chr3L 5969958 5970008 -18573549 + (TGAG)n Simple_repeat Simple_repeat 4 53 0 2 630 201 74 0 0 chr3L 5974034 5974061 -18569496 + (TATCG)n Simple_repeat Simple_repeat 1 27 0 2 630 25 0 0 0 chr3L 5980176 5980201 -18563356 + AT_rich Low_complexity Low_complexity 1 25 0 2 630 208 196 22 0 chr3L 5982939 5982985 -18560572 + (ATG)n Simple_repeat Simple_repeat 1 47 0 2 630 221 200 0 30 chr3L 5985605 5985672 -18557885 + (CAAAC)n Simple_repeat Simple_repeat 3 67 0 2 630 31 68 0 0 chr3L 5987332 5987391 -18556166 + AT_rich Low_complexity Low_complexity 1 59 0 2 630 183 188 0 0 chr3L 5992920 5992968 -18550589 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 630 219 69 0 0 chr3L 5994833 5994862 -18548695 + (T)n Simple_repeat Simple_repeat 1 29 0 2 630 3497 0 0 3 chr3L 5994881 5995269 -18548288 - LINEJ1_DM LINE Jockey -10 5010 4624 2 630 20373 9 1 0 chr3L 5995269 5997476 -18546081 - LINEJ1_DM LINE Jockey -2806 2214 7 2 630 180 77 0 0 chr3L 5999218 5999244 -18544313 + (TTTTTA)n Simple_repeat Simple_repeat 5 30 0 2 630 201 121 0 0 chr3L 6004639 6004672 -18538885 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 630 23 0 0 0 chr3L 6009760 6009783 -18533774 + AT_rich Low_complexity Low_complexity 1 23 0 2 630 24 0 0 0 chr3L 6010661 6010685 -18532872 + AT_rich Low_complexity Low_complexity 1 24 0 2 630 180 111 0 0 chr3L 6011763 6011790 -18531767 + (CAT)n Simple_repeat Simple_repeat 1 27 0 2 630 230 253 0 46 chr3L 6011967 6012054 -18531503 + T-rich Low_complexity Low_complexity 6 88 0 2 630 278 315 9 9 chr3L 6012495 6012604 -18530953 + (CAG)n Simple_repeat Simple_repeat 1 109 0 2 630 225 385 0 0 chr3L 6012622 6012718 -18530839 + (CCCGAA)n Simple_repeat Simple_repeat 5 100 0 2 630 31 0 0 0 chr3L 6013066 6013097 -18530460 + AT_rich Low_complexity Low_complexity 1 31 0 2 630 279 93 0 0 chr3L 6013976 6014019 -18529538 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 630 180 0 0 0 chr3L 6018898 6018918 -18524639 + (TTTAG)n Simple_repeat Simple_repeat 4 23 0 2 630 24 32 0 0 chr3L 6019156 6019187 -18524370 + AT_rich Low_complexity Low_complexity 1 31 0 2 630 24 0 0 0 chr3L 6019362 6019386 -18524171 + AT_rich Low_complexity Low_complexity 1 24 0 2 630 186 71 0 0 chr3L 6021741 6021769 -18521788 + (CTG)n Simple_repeat Simple_repeat 1 28 0 2 630 186 167 0 0 chr3L 6023284 6023320 -18520237 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 630 213 39 0 0 chr3L 6023681 6023707 -18519850 + (TTCGG)n Simple_repeat Simple_repeat 2 27 0 2 631 21 0 0 0 chr3L 6030081 6030102 -18513455 + GC_rich Low_complexity Low_complexity 1 21 0 2 631 21198 3 0 0 chr3L 6033515 6035820 -18507737 - DOC LINE Jockey -4 4721 2418 2 631 234 0 0 0 chr3L 6037931 6037957 -18505600 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 631 21 0 0 0 chr3L 6042313 6042334 -18501223 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 260 53 26 0 chr3L 6044980 6045018 -18498539 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 631 242 130 43 0 chr3L 6046439 6046485 -18497072 + Gypsy12_I LTR Gypsy 293 340 -5206 2 631 306 242 59 29 chr3L 6046572 6046674 -18496883 - Gypsy12A_LTR LTR Gypsy -2141 139 35 2 631 206 250 0 35 chr3L 6050667 6050725 -18492832 + (ATTCG)n Simple_repeat Simple_repeat 5 60 0 2 631 213 121 0 0 chr3L 6051630 6051663 -18491894 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 2 631 23 54 0 0 chr3L 6052712 6052749 -18490808 + AT_rich Low_complexity Low_complexity 1 37 0 2 631 26 30 0 0 chr3L 6058208 6058241 -18485316 + AT_rich Low_complexity Low_complexity 1 33 0 2 631 26 0 0 0 chr3L 6060378 6060404 -18483153 + AT_rich Low_complexity Low_complexity 1 26 0 2 631 30 45 0 0 chr3L 6061699 6061743 -18481814 + AT_rich Low_complexity Low_complexity 1 44 0 2 631 28 48 0 0 chr3L 6063000 6063042 -18480515 + AT_rich Low_complexity Low_complexity 1 42 0 2 631 24 0 0 0 chr3L 6064616 6064640 -18478917 + AT_rich Low_complexity Low_complexity 1 24 0 2 631 21 95 0 0 chr3L 6064835 6064898 -18478659 + AT_rich Low_complexity Low_complexity 1 63 0 2 631 204 163 23 0 chr3L 6064900 6064943 -18478614 + (TAA)n Simple_repeat Simple_repeat 2 45 0 2 631 23 0 0 0 chr3L 6071429 6071452 -18472105 + AT_rich Low_complexity Low_complexity 1 23 0 2 631 207 100 0 0 chr3L 6073362 6073392 -18470165 + (CAT)n Simple_repeat Simple_repeat 1 30 0 2 631 438 139 0 0 chr3L 6073399 6073471 -18470086 + (CAG)n Simple_repeat Simple_repeat 2 73 0 2 631 30 0 0 0 chr3L 6074590 6074620 -18468937 + AT_rich Low_complexity Low_complexity 1 30 0 2 631 225 94 0 0 chr3L 6077072 6077104 -18466453 + (TCTG)n Simple_repeat Simple_repeat 4 35 0 2 631 213 94 0 0 chr3L 6078167 6078199 -18465358 + (TTG)n Simple_repeat Simple_repeat 3 34 0 2 631 44 84 0 0 chr3L 6078350 6078457 -18465100 + AT_rich Low_complexity Low_complexity 1 107 0 2 631 36 0 0 0 chr3L 6078476 6078512 -18465045 + AT_rich Low_complexity Low_complexity 1 36 0 2 631 194 100 75 0 chr3L 6079702 6079742 -18463815 + (CATCC)n Simple_repeat Simple_repeat 3 45 0 2 631 21 0 0 0 chr3L 6079933 6079954 -18463603 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 205 238 0 60 chr3L 6080139 6080206 -18463351 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2 631 231 193 35 0 chr3L 6083387 6083444 -18460113 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 631 200 279 0 0 chr3L 6084041 6084109 -18459448 + A-rich Low_complexity Low_complexity 1 68 0 2 631 25 0 0 0 chr3L 6094464 6094489 -18449068 + AT_rich Low_complexity Low_complexity 1 25 0 2 631 36 53 0 0 chr3L 6094526 6094583 -18448974 + AT_rich Low_complexity Low_complexity 1 57 0 2 631 201 263 26 0 chr3L 6096798 6096874 -18446683 + (CAG)n Simple_repeat Simple_repeat 1 78 0 2 631 200 176 0 38 chr3L 6097299 6097352 -18446205 + T-rich Low_complexity Low_complexity 3 53 0 2 631 273 29 0 0 chr3L 6099524 6099558 -18443999 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 631 241 235 0 0 chr3L 6101679 6101730 -18441827 + (TCTCTG)n Simple_repeat Simple_repeat 3 53 0 2 631 234 239 0 0 chr3L 6103348 6103415 -18440142 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 631 202 219 0 0 chr3L 6104324 6104365 -18439192 + (CAG)n Simple_repeat Simple_repeat 3 43 0 2 631 24 32 0 0 chr3L 6105539 6105570 -18437987 + AT_rich Low_complexity Low_complexity 1 31 0 2 631 21 36 0 0 chr3L 6108524 6108552 -18435005 + AT_rich Low_complexity Low_complexity 1 28 0 2 631 209 191 0 0 chr3L 6109414 6109456 -18434101 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 631 29 0 0 0 chr3L 6109832 6109861 -18433696 + AT_rich Low_complexity Low_complexity 1 29 0 2 631 195 42 0 0 chr3L 6110306 6110330 -18433227 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 631 51 31 0 0 chr3L 6112264 6112329 -18431228 + AT_rich Low_complexity Low_complexity 1 65 0 2 631 21 0 0 0 chr3L 6114415 6114436 -18429121 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 210 163 0 23 chr3L 6115596 6115640 -18427917 + G-rich Low_complexity Low_complexity 3 45 0 2 631 22 56 0 0 chr3L 6118118 6118154 -18425403 + AT_rich Low_complexity Low_complexity 1 36 0 2 631 31 26 0 0 chr3L 6120344 6120382 -18423175 + AT_rich Low_complexity Low_complexity 1 38 0 2 631 25 75 0 0 chr3L 6120518 6120571 -18422986 + AT_rich Low_complexity Low_complexity 1 53 0 2 631 24 32 0 0 chr3L 6123078 6123109 -18420448 + AT_rich Low_complexity Low_complexity 1 31 0 2 631 28 95 0 0 chr3L 6123200 6123284 -18420273 + AT_rich Low_complexity Low_complexity 1 84 0 2 631 2170 111 22 14 chr3L 6127086 6127499 -18416058 - DNAREP1_DM LINE Penelope -262 332 1 2 631 428 175 72 3 chr3L 6128717 6128828 -18414729 + G2_DM LINE Jockey 1877 1952 -1150 2 631 751 301 85 29 chr3L 6128818 6129229 -18414328 + G2_DM LINE Jockey 2090 2523 -579 2 631 26 0 0 0 chr3L 6130162 6130188 -18413369 + AT_rich Low_complexity Low_complexity 1 26 0 2 631 23 54 0 0 chr3L 6137194 6137231 -18406326 + AT_rich Low_complexity Low_complexity 1 37 0 2 631 1390 128 5 0 chr3L 6139101 6139312 -18404245 - DNAREP1_DM LINE Penelope -382 212 1 2 631 21 0 0 0 chr3L 6141259 6141280 -18402277 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 1964 143 34 13 chr3L 6141744 6142183 -18401374 - DNAREP1_DM LINE Penelope -262 332 1 2 631 21 0 0 0 chr3L 6144130 6144151 -18399406 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 233 146 0 20 chr3L 6145209 6145258 -18398299 + (ACTG)n Simple_repeat Simple_repeat 1 48 0 2 631 195 129 0 0 chr3L 6148205 6148236 -18395321 + (TCCG)n Simple_repeat Simple_repeat 3 33 0 2 631 33 25 0 0 chr3L 6152011 6152051 -18391506 + AT_rich Low_complexity Low_complexity 1 40 0 2 631 35 0 0 0 chr3L 6154313 6154348 -18389209 + AT_rich Low_complexity Low_complexity 1 35 0 2 631 32 81 0 0 chr3L 6155258 6155332 -18388225 + AT_rich Low_complexity Low_complexity 1 74 0 2 631 26 74 0 0 chr3L 6156810 6156864 -18386693 + AT_rich Low_complexity Low_complexity 1 54 0 2 631 32 26 0 0 chr3L 6157839 6157878 -18385679 + AT_rich Low_complexity Low_complexity 1 39 0 2 631 23 0 0 0 chr3L 6157944 6157967 -18385590 + AT_rich Low_complexity Low_complexity 1 23 0 2 631 228 143 0 0 chr3L 6158257 6158299 -18385258 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 631 186 171 0 0 chr3L 6160115 6160156 -18383401 + (CAAT)n Simple_repeat Simple_repeat 3 43 0 2 632 360 64 0 0 chr3L 6162256 6162303 -18381254 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 632 327 25 0 0 chr3L 6162632 6162672 -18380885 + (T)n Simple_repeat Simple_repeat 1 40 0 2 632 219 158 52 17 chr3L 6162750 6162808 -18380749 + (TATG)n Simple_repeat Simple_repeat 1 60 0 2 632 31 82 0 0 chr3L 6178309 6178382 -18365175 + AT_rich Low_complexity Low_complexity 1 73 0 2 632 21 71 0 0 chr3L 6179074 6179116 -18364441 + AT_rich Low_complexity Low_complexity 1 42 0 2 632 215 216 0 0 chr3L 6181598 6181649 -18361908 + CT-rich Low_complexity Low_complexity 3 53 0 2 632 29 47 0 0 chr3L 6182345 6182388 -18361169 + AT_rich Low_complexity Low_complexity 1 43 0 2 632 23 33 0 0 chr3L 6182673 6182703 -18360854 + AT_rich Low_complexity Low_complexity 1 30 0 2 632 21 95 0 0 chr3L 6186482 6186545 -18357012 + AT_rich Low_complexity Low_complexity 1 63 0 2 632 38 61 0 0 chr3L 6187996 6188062 -18355495 + AT_rich Low_complexity Low_complexity 1 66 0 2 632 24 32 0 0 chr3L 6192004 6192035 -18351522 + AT_rich Low_complexity Low_complexity 1 31 0 2 632 23 54 0 0 chr3L 6196171 6196208 -18347349 + AT_rich Low_complexity Low_complexity 1 37 0 2 632 285 250 0 0 chr3L 6198522 6198606 -18344951 + (TTG)n Simple_repeat Simple_repeat 3 86 0 2 632 182 22 133 0 chr3L 6205058 6205103 -18338454 + (TATAA)n Simple_repeat Simple_repeat 5 55 0 2 632 27 81 0 0 chr3L 6213082 6213144 -18330413 + AT_rich Low_complexity Low_complexity 1 62 0 2 632 3971 5 0 0 chr3L 6214069 6214497 -18329060 + ROO_LTR LTR Pao 1 428 0 2 632 74394 1 4 2 chr3L 6214497 6222735 -18320822 + ROO_I LTR Pao 1 8256 0 2 632 3994 2 0 0 chr3L 6222735 6223163 -18320394 + ROO_LTR LTR Pao 1 428 0 2 632 33 25 0 0 chr3L 6231887 6231927 -18311630 + AT_rich Low_complexity Low_complexity 1 40 0 2 632 26 0 0 0 chr3L 6236938 6236964 -18306593 + AT_rich Low_complexity Low_complexity 1 26 0 2 632 21 57 0 0 chr3L 6237885 6237920 -18305637 + AT_rich Low_complexity Low_complexity 1 35 0 2 632 35 54 0 0 chr3L 6240932 6240988 -18302569 + AT_rich Low_complexity Low_complexity 1 56 0 2 632 209 179 0 0 chr3L 6241095 6241134 -18302423 + (CTG)n Simple_repeat Simple_repeat 3 41 0 2 632 23 33 0 0 chr3L 6245297 6245327 -18298230 + AT_rich Low_complexity Low_complexity 1 30 0 2 632 50 0 0 0 chr3L 6246537 6246587 -18296970 + AT_rich Low_complexity Low_complexity 1 50 0 2 632 201 147 0 0 chr3L 6249592 6249626 -18293931 + (CAGCT)n Simple_repeat Simple_repeat 5 38 0 2 632 29 28 0 0 chr3L 6249968 6250004 -18293553 + AT_rich Low_complexity Low_complexity 1 36 0 2 632 22 94 0 0 chr3L 6250350 6250414 -18293143 + AT_rich Low_complexity Low_complexity 1 64 0 2 632 21 57 0 0 chr3L 6253996 6254031 -18289526 + AT_rich Low_complexity Low_complexity 1 35 0 2 632 22 35 0 0 chr3L 6259624 6259653 -18283904 + AT_rich Low_complexity Low_complexity 1 29 0 2 632 186 118 0 0 chr3L 6259896 6259930 -18283627 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 632 243 110 13 76 chr3L 6264661 6264740 -18278817 + ROO_I LTR Pao 661 734 -7522 2 632 276 30 0 0 chr3L 6264868 6264901 -18278656 + (CTG)n Simple_repeat Simple_repeat 1 33 0 2 632 253 220 0 0 chr3L 6265367 6265426 -18278131 + (CAA)n Simple_repeat Simple_repeat 3 61 0 2 632 211 292 10 20 chr3L 6266354 6266452 -18277105 + (CAA)n Simple_repeat Simple_repeat 3 99 0 2 632 21 36 0 0 chr3L 6267365 6267393 -18276164 + AT_rich Low_complexity Low_complexity 1 28 0 2 632 202 234 0 15 chr3L 6268143 6268208 -18275349 + A-rich Low_complexity Low_complexity 1 64 0 2 632 221 57 0 28 chr3L 6268346 6268382 -18275175 + (TATAG)n Simple_repeat Simple_repeat 1 35 0 2 632 22 80 0 0 chr3L 6268727 6268777 -18274780 + AT_rich Low_complexity Low_complexity 1 50 0 2 632 340 155 102 46 chr3L 6269345 6269453 -18274104 + ROO_I LTR Pao 619 732 -7524 2 632 28 61 0 0 chr3L 6270095 6270144 -18273413 + AT_rich Low_complexity Low_complexity 1 49 0 2 632 237 188 0 20 chr3L 6270554 6270603 -18272954 + (CAA)n Simple_repeat Simple_repeat 3 50 0 2 632 23 0 0 0 chr3L 6272049 6272072 -18271485 + AT_rich Low_complexity Low_complexity 1 23 0 2 632 21 0 0 0 chr3L 6273439 6273460 -18270097 + AT_rich Low_complexity Low_complexity 1 21 0 2 632 266 326 0 23 chr3L 6274342 6274430 -18269127 + (TTCGGG)n Simple_repeat Simple_repeat 5 90 0 2 632 240 35 0 0 chr3L 6276227 6276256 -18267301 + (TAGG)n Simple_repeat Simple_repeat 3 31 0 2 632 22 56 0 0 chr3L 6276541 6276577 -18266980 + AT_rich Low_complexity Low_complexity 1 36 0 2 632 27 96 0 0 chr3L 6278099 6278182 -18265375 + AT_rich Low_complexity Low_complexity 1 83 0 2 632 303 85 0 0 chr3L 6279335 6279382 -18264175 + (CTG)n Simple_repeat Simple_repeat 1 47 0 2 632 227 79 26 0 chr3L 6279806 6279844 -18263713 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 632 180 111 0 0 chr3L 6280103 6280130 -18263427 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 632 208 196 0 21 chr3L 6282057 6282104 -18261453 + (TTG)n Simple_repeat Simple_repeat 1 46 0 2 632 304 260 14 0 chr3L 6282192 6282265 -18261292 + (CCCCAA)n Simple_repeat Simple_repeat 5 78 0 2 632 31 44 0 0 chr3L 6284348 6284393 -18259164 + AT_rich Low_complexity Low_complexity 1 45 0 2 632 243 103 0 0 chr3L 6285153 6285192 -18258365 + (CAG)n Simple_repeat Simple_repeat 1 39 0 2 632 25 0 0 0 chr3L 6285578 6285603 -18257954 + AT_rich Low_complexity Low_complexity 1 25 0 2 632 195 42 0 0 chr3L 6285970 6285994 -18257563 + (CAT)n Simple_repeat Simple_repeat 1 24 0 2 632 247 170 0 36 chr3L 6288997 6289052 -18254505 + (CTTCG)n Simple_repeat Simple_repeat 4 56 0 2 632 214 167 0 0 chr3L 6290157 6290193 -18253364 + (CTG)n Simple_repeat Simple_repeat 3 38 0 2 633 46 54 0 0 chr3L 6292498 6292572 -18250985 + AT_rich Low_complexity Low_complexity 1 74 0 2 633 22 35 0 0 chr3L 6295459 6295488 -18248069 + AT_rich Low_complexity Low_complexity 1 29 0 2 633 210 71 0 0 chr3L 6297337 6297365 -18246192 + (CAG)n Simple_repeat Simple_repeat 3 30 0 2 633 228 35 0 0 chr3L 6297903 6297932 -18245625 + (CAGC)n Simple_repeat Simple_repeat 4 32 0 2 633 211 195 0 0 chr3L 6298086 6298127 -18245430 + (CTTTG)n Simple_repeat Simple_repeat 4 44 0 2 633 211 185 0 53 chr3L 6299275 6299332 -18244225 + (GCTG)n Simple_repeat Simple_repeat 3 56 0 2 633 28 48 0 0 chr3L 6301825 6301867 -18241690 + AT_rich Low_complexity Low_complexity 1 42 0 2 633 249 151 0 0 chr3L 6302110 6302163 -18241394 + (CAG)n Simple_repeat Simple_repeat 1 53 0 2 633 261 264 0 14 chr3L 6302301 6302374 -18241183 + (TTG)n Simple_repeat Simple_repeat 3 74 0 2 633 23 0 0 0 chr3L 6304085 6304108 -18239449 + AT_rich Low_complexity Low_complexity 1 23 0 2 633 23 0 0 0 chr3L 6304926 6304949 -18238608 + AT_rich Low_complexity Low_complexity 1 23 0 2 633 216 167 0 45 chr3L 6305313 6305357 -18238200 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 2 633 186 43 0 0 chr3L 6306098 6306121 -18237436 + (CGGA)n Simple_repeat Simple_repeat 1 23 0 2 633 33 0 0 0 chr3L 6306206 6306239 -18237318 + AT_rich Low_complexity Low_complexity 1 33 0 2 633 26 82 0 0 chr3L 6307422 6307483 -18236074 + AT_rich Low_complexity Low_complexity 1 61 0 2 633 1588 74 69 0 chr3L 6308255 6308471 -18235086 - DNAREP1_DM LINE Penelope -9 585 355 2 633 1079 78 39 0 chr3L 6308467 6308621 -18234936 - DNAREP1_DM LINE Penelope -433 161 2 2 633 25 31 0 0 chr3L 6308923 6308955 -18234602 + AT_rich Low_complexity Low_complexity 1 32 0 2 633 28 29 0 0 chr3L 6310827 6310862 -18232695 + AT_rich Low_complexity Low_complexity 1 35 0 2 633 27 0 0 0 chr3L 6310959 6310986 -18232571 + AT_rich Low_complexity Low_complexity 1 27 0 2 633 226 246 0 0 chr3L 6324376 6324441 -18219116 - ROO_I LTR Pao -7524 732 668 2 633 36 62 0 0 chr3L 6327153 6327217 -18216340 + AT_rich Low_complexity Low_complexity 1 64 0 2 633 3605 5 7 7 chr3L 6328164 6328578 -18214979 - DM297_LTR LTR Gypsy 0 414 1 2 633 35 41 0 0 chr3L 6333250 6333299 -18210258 + AT_rich Low_complexity Low_complexity 1 49 0 2 633 23 0 0 0 chr3L 6339587 6339610 -18203947 + AT_rich Low_complexity Low_complexity 1 23 0 2 633 255 41 61 0 chr3L 6344859 6344908 -18198649 + (TTTTTG)n Simple_repeat Simple_repeat 1 52 0 2 633 195 100 0 0 chr3L 6348927 6348957 -18194600 + (CAGC)n Simple_repeat Simple_repeat 3 32 0 2 633 198 191 0 0 chr3L 6350846 6350888 -18192669 + (CAA)n Simple_repeat Simple_repeat 3 44 0 2 633 225 163 0 0 chr3L 6352158 6352207 -18191350 + (CAG)n Simple_repeat Simple_repeat 3 51 0 2 633 25 0 0 0 chr3L 6354982 6355007 -18188550 + AT_rich Low_complexity Low_complexity 1 25 0 2 633 25 0 0 0 chr3L 6358460 6358485 -18185072 + AT_rich Low_complexity Low_complexity 1 25 0 2 633 52 30 0 0 chr3L 6360021 6360087 -18183470 + AT_rich Low_complexity Low_complexity 1 66 0 2 633 29 60 0 0 chr3L 6362887 6362937 -18180620 + AT_rich Low_complexity Low_complexity 1 50 0 2 633 26 64 0 0 chr3L 6363770 6363817 -18179740 + AT_rich Low_complexity Low_complexity 1 47 0 2 633 203 164 36 18 chr3L 6367650 6367706 -18175851 + (ATCG)n Simple_repeat Simple_repeat 2 58 0 2 633 188 122 24 0 chr3L 6367967 6368008 -18175549 + (GAATG)n Simple_repeat Simple_repeat 2 43 0 2 633 26 50 0 0 chr3L 6374287 6374327 -18169230 + AT_rich Low_complexity Low_complexity 1 40 0 2 633 233 231 31 0 chr3L 6376964 6377029 -18166528 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 633 24 32 0 0 chr3L 6378497 6378528 -18165029 + AT_rich Low_complexity Low_complexity 1 31 0 2 633 29 28 0 0 chr3L 6379342 6379378 -18164179 + AT_rich Low_complexity Low_complexity 1 36 0 2 633 405 284 66 47 chr3L 6379454 6379712 -18163845 - SAR_DM Satellite Satellite -594 878 616 2 633 381 245 78 2 chr3L 6379630 6379788 -18163769 + XDMR Unknown Unknown 6 158 -203 2 633 22 0 0 0 chr3L 6382747 6382769 -18160788 + AT_rich Low_complexity Low_complexity 1 22 0 2 633 217 305 0 0 chr3L 6384386 6384468 -18159089 + (CCCCAA)n Simple_repeat Simple_repeat 5 86 0 2 633 31 0 0 0 chr3L 6384561 6384592 -18158965 + AT_rich Low_complexity Low_complexity 1 31 0 2 633 222 91 0 0 chr3L 6385927 6385960 -18157597 + (AAGTG)n Simple_repeat Simple_repeat 5 37 0 2 633 21 36 0 0 chr3L 6387571 6387599 -18155958 + AT_rich Low_complexity Low_complexity 1 28 0 2 633 210 118 0 0 chr3L 6387997 6388031 -18155526 + (A)n Simple_repeat Simple_repeat 1 34 0 2 633 21 0 0 0 chr3L 6389720 6389741 -18153816 + AT_rich Low_complexity Low_complexity 1 21 0 2 633 186 143 0 0 chr3L 6389884 6389919 -18153638 + (GGATG)n Simple_repeat Simple_repeat 4 38 0 2 633 201 108 0 0 chr3L 6390088 6390125 -18153432 + (TCCA)n Simple_repeat Simple_repeat 2 38 0 2 633 22 0 0 0 chr3L 6396250 6396272 -18147285 + AT_rich Low_complexity Low_complexity 1 22 0 2 633 212 184 20 0 chr3L 6398211 6398260 -18145297 + A-rich Low_complexity Low_complexity 2 51 0 2 633 3931 0 0 0 chr3L 6398813 6399241 -18144316 + ROO_LTR LTR Pao 1 428 0 2 633 73320 0 1 0 chr3L 6399241 6407485 -18136072 + ROO_I LTR Pao 1 8256 0 2 633 3874 7 0 0 chr3L 6407485 6407913 -18135644 + ROO_LTR LTR Pao 1 428 0 2 633 72627 2 3 0 chr3L 6407913 6416141 -18127416 + ROO_I LTR Pao 1 8256 0 2 633 3907 2 0 0 chr3L 6416141 6416569 -18126988 + ROO_LTR LTR Pao 1 428 0 2 79 72942 0 4 0 chr3L 6416569 6424791 -18118766 + ROO_I LTR Pao 1 8256 0 2 634 3931 0 0 0 chr3L 6424791 6425219 -18118338 + ROO_LTR LTR Pao 1 428 0 2 634 240 86 0 0 chr3L 6426314 6426349 -18117208 + (CAG)n Simple_repeat Simple_repeat 3 37 0 2 634 21 36 0 0 chr3L 6427257 6427285 -18116272 + AT_rich Low_complexity Low_complexity 1 28 0 2 634 198 0 0 0 chr3L 6429876 6429898 -18113659 + (CATATA)n Simple_repeat Simple_repeat 1 22 0 2 634 28 61 0 0 chr3L 6430837 6430886 -18112671 + AT_rich Low_complexity Low_complexity 1 49 0 2 634 23 54 0 0 chr3L 6430969 6431006 -18112551 + AT_rich Low_complexity Low_complexity 1 37 0 2 634 227 233 13 40 chr3L 6431377 6431453 -18112104 + T-rich Low_complexity Low_complexity 3 76 0 2 634 24 67 0 0 chr3L 6433770 6433815 -18109742 + AT_rich Low_complexity Low_complexity 1 45 0 2 634 249 33 0 0 chr3L 6435947 6435977 -18107580 + (CAA)n Simple_repeat Simple_repeat 2 31 0 2 634 21 36 0 0 chr3L 6436330 6436358 -18107199 + AT_rich Low_complexity Low_complexity 1 28 0 2 634 306 0 0 0 chr3L 6436810 6436844 -18106713 + (T)n Simple_repeat Simple_repeat 1 34 0 2 634 21 36 0 0 chr3L 6439178 6439206 -18104351 + AT_rich Low_complexity Low_complexity 1 28 0 2 634 192 77 0 0 chr3L 6443060 6443086 -18100471 + (ACCG)n Simple_repeat Simple_repeat 3 28 0 2 634 303 71 0 0 chr3L 6444188 6444230 -18099327 + (ATG)n Simple_repeat Simple_repeat 1 42 0 2 634 291 71 0 0 chr3L 6444827 6444869 -18098688 + (CAGT)n Simple_repeat Simple_repeat 3 44 0 2 634 214 140 0 57 chr3L 6444960 6445013 -18098544 + (CAG)n Simple_repeat Simple_repeat 3 52 0 2 634 23 54 0 0 chr3L 6447704 6447741 -18095816 + AT_rich Low_complexity Low_complexity 1 37 0 2 634 28 29 0 0 chr3L 6448718 6448753 -18094804 + AT_rich Low_complexity Low_complexity 1 35 0 2 634 288 215 32 0 chr3L 6448851 6448944 -18094613 - ROO_I LTR Pao -7518 738 643 2 634 23 54 0 0 chr3L 6449511 6449548 -18094009 + AT_rich Low_complexity Low_complexity 1 37 0 2 634 294 138 0 0 chr3L 6449995 6450053 -18093504 + (CAGT)n Simple_repeat Simple_repeat 1 58 0 2 634 250 339 0 0 chr3L 6450439 6450569 -18092988 + A-rich Low_complexity Low_complexity 1 130 0 2 634 26 0 0 0 chr3L 6456270 6456296 -18087261 + AT_rich Low_complexity Low_complexity 1 26 0 2 634 232 120 0 39 chr3L 6457944 6457996 -18085561 + (CAAAC)n Simple_repeat Simple_repeat 2 51 0 2 634 24 32 0 0 chr3L 6459919 6459950 -18083607 + AT_rich Low_complexity Low_complexity 1 31 0 2 634 26 0 0 0 chr3L 6460008 6460034 -18083523 + AT_rich Low_complexity Low_complexity 1 26 0 2 634 23 0 0 0 chr3L 6466036 6466059 -18077498 + AT_rich Low_complexity Low_complexity 1 23 0 2 634 243 152 0 0 chr3L 6466919 6466965 -18076592 + (CTG)n Simple_repeat Simple_repeat 3 48 0 2 634 24 0 0 0 chr3L 6470475 6470499 -18073058 + AT_rich Low_complexity Low_complexity 1 24 0 2 634 201 147 0 0 chr3L 6471538 6471572 -18071985 + (TCCG)n Simple_repeat Simple_repeat 4 37 0 2 634 194 62 31 0 chr3L 6475209 6475241 -18068316 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2 634 189 0 0 0 chr3L 6478974 6478995 -18064562 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 634 200 216 0 0 chr3L 6489195 6489232 -18054325 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 634 201 171 0 0 chr3L 6491021 6491056 -18052501 + T-rich Low_complexity Low_complexity 1 35 0 2 634 24 32 0 0 chr3L 6492724 6492755 -18050802 + AT_rich Low_complexity Low_complexity 1 31 0 2 634 333 0 0 0 chr3L 6496063 6496100 -18047457 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 634 40 49 0 0 chr3L 6496564 6496625 -18046932 + AT_rich Low_complexity Low_complexity 1 61 0 2 634 214 254 17 0 chr3L 6497023 6497082 -18046475 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 634 191 62 0 59 chr3L 6503487 6503521 -18040036 + (CTATA)n Simple_repeat Simple_repeat 5 36 0 2 634 21 36 0 0 chr3L 6506010 6506038 -18037519 + AT_rich Low_complexity Low_complexity 1 28 0 2 634 192 158 0 0 chr3L 6507613 6507651 -18035906 + (ATG)n Simple_repeat Simple_repeat 2 39 0 2 634 189 0 0 0 chr3L 6509349 6509370 -18034187 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 634 207 100 0 0 chr3L 6514501 6514531 -18029026 + (CTG)n Simple_repeat Simple_repeat 3 32 0 2 634 180 0 0 0 chr3L 6514588 6514608 -18028949 + (CTG)n Simple_repeat Simple_repeat 2 21 0 2 634 25 31 0 0 chr3L 6514966 6514998 -18028559 + AT_rich Low_complexity Low_complexity 1 32 0 2 634 249 33 0 0 chr3L 6518179 6518209 -18025348 + (CAG)n Simple_repeat Simple_repeat 3 32 0 2 634 211 211 0 0 chr3L 6519054 6519092 -18024465 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 634 197 163 0 20 chr3L 6519636 6519686 -18023871 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 634 216 0 0 0 chr3L 6527943 6527967 -18015590 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 634 32 0 0 0 chr3L 6532500 6532532 -18011025 + AT_rich Low_complexity Low_complexity 1 32 0 2 634 22 35 0 0 chr3L 6533575 6533604 -18009953 + AT_rich Low_complexity Low_complexity 1 29 0 2 634 21 0 0 0 chr3L 6534123 6534144 -18009413 + AT_rich Low_complexity Low_complexity 1 21 0 2 634 261 83 0 0 chr3L 6534624 6534660 -18008897 + (CAGA)n Simple_repeat Simple_repeat 4 39 0 2 634 206 170 21 0 chr3L 6534816 6534863 -18008694 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 634 312 27 0 0 chr3L 6535965 6536002 -18007555 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 634 204 67 0 0 chr3L 6540738 6540768 -18002789 + (A)n Simple_repeat Simple_repeat 1 30 0 2 634 219 219 0 0 chr3L 6540997 6541038 -18002519 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 634 27 0 0 0 chr3L 6543685 6543712 -17999845 + AT_rich Low_complexity Low_complexity 1 27 0 2 634 25 83 0 0 chr3L 6545324 6545384 -17998173 + AT_rich Low_complexity Low_complexity 1 60 0 2 635 25 51 0 0 chr3L 6554967 6555006 -17988551 + AT_rich Low_complexity Low_complexity 1 39 0 2 635 250 127 0 0 chr3L 6561932 6561987 -17981570 - ROO_I LTR Pao -7551 705 651 2 635 24 53 0 0 chr3L 6562689 6562727 -17980830 + AT_rich Low_complexity Low_complexity 1 38 0 2 635 21 57 0 0 chr3L 6566225 6566260 -17977297 + AT_rich Low_complexity Low_complexity 1 35 0 2 635 27 29 0 0 chr3L 6570535 6570569 -17972988 + AT_rich Low_complexity Low_complexity 1 34 0 2 635 22 56 0 0 chr3L 6571441 6571477 -17972080 + AT_rich Low_complexity Low_complexity 1 36 0 2 635 198 71 0 0 chr3L 6582636 6582664 -17960893 + (CAG)n Simple_repeat Simple_repeat 2 29 0 2 635 285 164 32 32 chr3L 6586050 6586113 -17957444 + DNAREP1_DM LINE Penelope 1 63 -531 2 635 22 0 0 0 chr3L 6606486 6606508 -17937049 + AT_rich Low_complexity Low_complexity 1 22 0 2 635 26 0 0 0 chr3L 6607408 6607434 -17936123 + AT_rich Low_complexity Low_complexity 1 26 0 2 635 21 0 0 0 chr3L 6607962 6607983 -17935574 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 198 0 0 0 chr3L 6608387 6608409 -17935148 + (A)n Simple_repeat Simple_repeat 1 22 0 2 635 25 31 0 0 chr3L 6608874 6608906 -17934651 + AT_rich Low_complexity Low_complexity 1 32 0 2 635 24 53 0 0 chr3L 6610504 6610542 -17933015 + AT_rich Low_complexity Low_complexity 1 38 0 2 635 25 31 0 0 chr3L 6610672 6610704 -17932853 + AT_rich Low_complexity Low_complexity 1 32 0 2 635 231 133 0 0 chr3L 6611111 6611156 -17932401 + (GGA)n Simple_repeat Simple_repeat 1 45 0 2 635 193 128 0 41 chr3L 6611792 6611841 -17931716 + (CATA)n Simple_repeat Simple_repeat 1 47 0 2 635 22 0 0 0 chr3L 6612232 6612254 -17931303 + AT_rich Low_complexity Low_complexity 1 22 0 2 635 24 0 0 0 chr3L 6613666 6613690 -17929867 + AT_rich Low_complexity Low_complexity 1 24 0 2 635 3373 0 0 0 chr3L 6613743 6614103 -17929454 - DMRT1B LINE R1 0 5183 4824 2 635 224 205 0 0 chr3L 6614112 6614151 -17929406 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 635 201 74 0 0 chr3L 6614309 6614336 -17929221 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 635 21 36 0 0 chr3L 6616314 6616342 -17927215 + AT_rich Low_complexity Low_complexity 1 28 0 2 635 26 74 0 0 chr3L 6618596 6618650 -17924907 + AT_rich Low_complexity Low_complexity 1 54 0 2 635 21 36 0 0 chr3L 6618783 6618811 -17924746 + AT_rich Low_complexity Low_complexity 1 28 0 2 635 249 33 0 0 chr3L 6619036 6619066 -17924491 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 635 189 74 0 0 chr3L 6620189 6620216 -17923341 + (TAG)n Simple_repeat Simple_repeat 2 28 0 2 635 204 158 0 26 chr3L 6621098 6621137 -17922420 + (TTG)n Simple_repeat Simple_repeat 3 40 0 2 635 195 129 0 0 chr3L 6622830 6622861 -17920696 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 635 226 229 0 16 chr3L 6623109 6623171 -17920386 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 635 237 108 0 0 chr3L 6630563 6630600 -17912957 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 635 255 61 0 0 chr3L 6633432 6633465 -17910092 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 635 186 43 0 0 chr3L 6633729 6633752 -17909805 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 2 635 39 0 0 0 chr3L 6636098 6636137 -17907420 + AT_rich Low_complexity Low_complexity 1 39 0 2 635 216 151 36 36 chr3L 6636517 6636572 -17906985 + A-rich Low_complexity Low_complexity 6 60 0 2 635 191 125 25 0 chr3L 6638590 6638630 -17904927 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 635 201 74 0 0 chr3L 6638885 6638912 -17904645 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 635 207 213 0 21 chr3L 6639224 6639272 -17904285 + A-rich Low_complexity Low_complexity 5 51 0 2 635 22 0 0 0 chr3L 6642512 6642534 -17901023 + AT_rich Low_complexity Low_complexity 1 22 0 2 635 231 88 0 0 chr3L 6643169 6643203 -17900354 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 635 207 0 0 0 chr3L 6646949 6646972 -17896585 + (TA)n Simple_repeat Simple_repeat 2 24 0 2 635 211 214 0 18 chr3L 6648445 6648502 -17895055 + (CTG)n Simple_repeat Simple_repeat 3 58 0 2 635 214 265 0 0 chr3L 6649941 6649990 -17893567 + (CACCAT)n Simple_repeat Simple_repeat 1 49 0 2 635 22 35 0 0 chr3L 6654994 6655023 -17888534 + AT_rich Low_complexity Low_complexity 1 29 0 2 635 26 30 0 0 chr3L 6656814 6656847 -17886710 + AT_rich Low_complexity Low_complexity 1 33 0 2 635 24 0 0 0 chr3L 6666221 6666245 -17877312 + AT_rich Low_complexity Low_complexity 1 24 0 2 635 21 0 0 0 chr3L 6666358 6666379 -17877178 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 192 152 0 0 chr3L 6667433 6667466 -17876091 + (ATGGTG)n Simple_repeat Simple_repeat 5 37 0 2 635 22 0 0 0 chr3L 6667978 6668000 -17875557 + AT_rich Low_complexity Low_complexity 1 22 0 2 635 226 167 24 0 chr3L 6669374 6669416 -17874141 + (CAT)n Simple_repeat Simple_repeat 3 45 0 2 635 246 32 0 0 chr3L 6670091 6670122 -17873435 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 635 189 74 0 0 chr3L 6673220 6673247 -17870310 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 635 202 227 0 0 chr3L 6674369 6674413 -17869144 + (CACTT)n Simple_repeat Simple_repeat 3 46 0 2 635 222 193 0 0 chr3L 6676490 6676547 -17867010 + CT-rich Low_complexity Low_complexity 2 58 0 2 635 291 122 0 0 chr3L 6676688 6676737 -17866820 + (CTA)n Simple_repeat Simple_repeat 2 50 0 2 635 23 54 0 0 chr3L 6679221 6679258 -17864299 + AT_rich Low_complexity Low_complexity 1 37 0 2 635 303 71 0 0 chr3L 6679929 6679971 -17863586 + (ATG)n Simple_repeat Simple_repeat 1 42 0 2 635 22 94 0 0 chr3L 6684492 6684556 -17859001 + AT_rich Low_complexity Low_complexity 1 64 0 2 636 23 68 0 0 chr3L 6685411 6685455 -17858102 + AT_rich Low_complexity Low_complexity 1 44 0 2 636 21 0 0 0 chr3L 6686023 6686044 -17857513 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 237 119 0 0 chr3L 6693036 6693078 -17850479 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 636 34 42 0 0 chr3L 6695803 6695851 -17847706 + AT_rich Low_complexity Low_complexity 1 48 0 2 636 28 0 0 0 chr3L 6697251 6697279 -17846278 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 180 77 0 0 chr3L 6698034 6698060 -17845497 + (A)n Simple_repeat Simple_repeat 1 26 0 2 636 30 27 0 0 chr3L 6700756 6700793 -17842764 + AT_rich Low_complexity Low_complexity 1 37 0 2 636 195 100 0 0 chr3L 6706516 6706546 -17837011 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 636 23 68 0 0 chr3L 6707150 6707194 -17836363 + AT_rich Low_complexity Low_complexity 1 44 0 2 636 214 132 0 36 chr3L 6707226 6707281 -17836276 + (TAA)n Simple_repeat Simple_repeat 1 53 0 2 636 213 296 0 0 chr3L 6707315 6707386 -17836171 + T-rich Low_complexity Low_complexity 1 71 0 2 636 201 132 0 0 chr3L 6707630 6707668 -17835889 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 2 636 29 60 0 0 chr3L 6707825 6707875 -17835682 + AT_rich Low_complexity Low_complexity 1 50 0 2 636 240 59 0 0 chr3L 6710237 6710271 -17833286 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 636 217 185 0 53 chr3L 6710539 6710596 -17832961 + A-rich Low_complexity Low_complexity 4 57 0 2 636 198 156 0 0 chr3L 6711572 6711617 -17831940 + T-rich Low_complexity Low_complexity 1 45 0 2 636 198 103 0 0 chr3L 6712824 6712853 -17830704 + (CAGC)n Simple_repeat Simple_repeat 4 32 0 2 636 24 0 0 0 chr3L 6713731 6713755 -17829802 + AT_rich Low_complexity Low_complexity 1 24 0 2 636 24 0 0 0 chr3L 6714323 6714347 -17829210 + AT_rich Low_complexity Low_complexity 1 24 0 2 636 183 42 0 0 chr3L 6714546 6714570 -17828987 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 636 23 0 0 0 chr3L 6714713 6714736 -17828821 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 22 0 0 0 chr3L 6715415 6715437 -17828120 + AT_rich Low_complexity Low_complexity 1 22 0 2 636 201 108 0 0 chr3L 6716231 6716268 -17827289 + (T)n Simple_repeat Simple_repeat 1 37 0 2 636 33 0 0 0 chr3L 6718773 6718806 -17824751 + AT_rich Low_complexity Low_complexity 1 33 0 2 636 25 31 0 0 chr3L 6721050 6721082 -17822475 + AT_rich Low_complexity Low_complexity 1 32 0 2 636 346 94 31 0 chr3L 6721790 6721854 -17821703 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 636 27 0 0 0 chr3L 6722074 6722101 -17821456 + AT_rich Low_complexity Low_complexity 1 27 0 2 636 200 180 0 39 chr3L 6722636 6722688 -17820869 + (TAA)n Simple_repeat Simple_repeat 3 52 0 2 636 201 171 0 0 chr3L 6722837 6722872 -17820685 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 2 636 293 149 0 171 chr3L 6724337 6724466 -17819091 - ROO_I LTR Pao -7513 743 637 2 636 237 159 0 0 chr3L 6724561 6724605 -17818952 + (CTG)n Simple_repeat Simple_repeat 1 44 0 2 636 309 315 0 18 chr3L 6724987 6725155 -17818402 + (CTG)n Simple_repeat Simple_repeat 3 167 0 2 636 195 100 0 0 chr3L 6725199 6725229 -17818328 + (CTG)n Simple_repeat Simple_repeat 1 30 0 2 636 246 62 0 0 chr3L 6725408 6725440 -17818117 + (CTG)n Simple_repeat Simple_repeat 3 34 0 2 636 364 174 21 11 chr3L 6725743 6725836 -17817721 - ROO_I LTR Pao -7530 726 633 2 636 307 104 69 59 chr3L 6725861 6725963 -17817594 - ROO_I LTR Pao -7513 743 641 2 636 211 281 0 43 chr3L 6729104 6729197 -17814360 + CT-rich Low_complexity Low_complexity 2 90 0 2 636 273 169 0 0 chr3L 6729908 6729967 -17813590 + CT-rich Low_complexity Low_complexity 5 63 0 2 636 24 32 0 0 chr3L 6730403 6730434 -17813123 + AT_rich Low_complexity Low_complexity 1 31 0 2 636 192 77 0 0 chr3L 6730946 6730972 -17812585 + (TGG)n Simple_repeat Simple_repeat 1 26 0 2 636 257 161 0 31 chr3L 6731045 6731109 -17812448 + (TTG)n Simple_repeat Simple_repeat 3 64 0 2 636 242 274 0 0 chr3L 6731129 6731191 -17812366 + (TTG)n Simple_repeat Simple_repeat 2 63 0 2 636 243 176 20 0 chr3L 6732036 6732087 -17811470 + (CTG)n Simple_repeat Simple_repeat 1 52 0 2 636 273 209 0 0 chr3L 6732463 6732530 -17811027 + (TTG)n Simple_repeat Simple_repeat 3 69 0 2 636 219 36 0 0 chr3L 6732871 6732899 -17810658 + (TCG)n Simple_repeat Simple_repeat 3 30 0 2 636 351 136 0 0 chr3L 6733779 6733838 -17809719 + (CTG)n Simple_repeat Simple_repeat 3 61 0 2 636 21 0 0 0 chr3L 6736041 6736062 -17807495 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 45 19 0 0 chr3L 6736578 6736630 -17806927 + AT_rich Low_complexity Low_complexity 1 52 0 2 636 366 80 0 0 chr3L 6742397 6742447 -17801110 + (CTG)n Simple_repeat Simple_repeat 1 50 0 2 636 253 82 20 20 chr3L 6742739 6742789 -17800768 + (CTG)n Simple_repeat Simple_repeat 1 50 0 2 636 226 57 0 0 chr3L 6742833 6742868 -17800689 - ROO_I LTR Pao -7570 686 652 2 636 273 277 0 0 chr3L 6743190 6743284 -17800273 + (CTG)n Simple_repeat Simple_repeat 1 94 0 2 636 245 182 0 93 chr3L 6743358 6743455 -17800102 - ROO_I LTR Pao -7528 728 641 2 636 232 299 0 0 chr3L 6743706 6743793 -17799764 + (CTG)n Simple_repeat Simple_repeat 1 87 0 2 636 305 147 44 0 chr3L 6743855 6743923 -17799634 - ROO_I LTR Pao -7522 734 664 2 636 294 194 29 58 chr3L 6743999 6744103 -17799454 - ROO_I LTR Pao -7519 737 637 2 636 353 174 0 0 chr3L 6744154 6744252 -17799305 - ROO_I LTR Pao -7518 738 641 2 636 23 0 0 0 chr3L 6744715 6744738 -17798819 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 186 43 0 0 chr3L 6745826 6745849 -17797708 + (GAA)n Simple_repeat Simple_repeat 1 23 0 2 636 24 0 0 0 chr3L 6749673 6749697 -17793860 + AT_rich Low_complexity Low_complexity 1 24 0 2 636 22 35 0 0 chr3L 6751491 6751520 -17792037 + AT_rich Low_complexity Low_complexity 1 29 0 2 636 183 42 0 0 chr3L 6752250 6752274 -17791283 + (T)n Simple_repeat Simple_repeat 1 24 0 2 636 246 186 14 0 chr3L 6753044 6753114 -17790443 - ROO_I LTR Pao -7518 738 668 2 636 25 90 0 0 chr3L 6755859 6755926 -17787631 + AT_rich Low_complexity Low_complexity 1 67 0 2 636 28 48 0 0 chr3L 6756771 6756813 -17786744 + AT_rich Low_complexity Low_complexity 1 42 0 2 636 31 58 0 0 chr3L 6756938 6756990 -17786567 + AT_rich Low_complexity Low_complexity 1 52 0 2 636 34 96 0 0 chr3L 6758352 6758456 -17785101 + AT_rich Low_complexity Low_complexity 1 104 0 2 636 198 0 0 0 chr3L 6759588 6759610 -17783947 + (GGA)n Simple_repeat Simple_repeat 2 23 0 2 636 195 42 0 0 chr3L 6759685 6759709 -17783848 + (AACTG)n Simple_repeat Simple_repeat 5 28 0 2 636 26 30 0 0 chr3L 6762823 6762856 -17780701 + AT_rich Low_complexity Low_complexity 1 33 0 2 636 189 0 0 0 chr3L 6763075 6763096 -17780461 + (TGGA)n Simple_repeat Simple_repeat 2 22 0 2 636 216 0 0 0 chr3L 6763428 6763452 -17780105 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2 636 346 137 0 27 chr3L 6767427 6767502 -17776055 + ROO_I LTR Pao 641 713 -7543 2 636 24 67 0 0 chr3L 6768257 6768302 -17775255 + AT_rich Low_complexity Low_complexity 1 45 0 2 636 183 184 0 0 chr3L 6771141 6771179 -17772378 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 636 21 36 0 0 chr3L 6771574 6771602 -17771955 + AT_rich Low_complexity Low_complexity 1 28 0 2 636 22 0 0 0 chr3L 6772994 6773016 -17770541 + AT_rich Low_complexity Low_complexity 1 22 0 2 636 17955 1 0 1 chr3L 6774278 6776227 -17767330 - DOC LINE Jockey 0 4725 2778 2 636 21 0 0 0 chr3L 6777293 6777314 -17766243 + AT_rich Low_complexity Low_complexity 1 21 0 2 636 23 0 0 0 chr3L 6777755 6777778 -17765779 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 22 0 0 0 chr3L 6781616 6781638 -17761919 + AT_rich Low_complexity Low_complexity 1 22 0 2 636 495 95 0 0 chr3L 6785278 6785352 -17758205 + (CAG)n Simple_repeat Simple_repeat 1 74 0 2 636 336 188 0 0 chr3L 6785458 6785527 -17758030 + (CAA)n Simple_repeat Simple_repeat 2 70 0 2 636 233 177 16 31 chr3L 6785540 6785604 -17757953 + (CAG)n Simple_repeat Simple_repeat 2 64 0 2 636 282 132 0 0 chr3L 6785884 6785937 -17757620 + (CCA)n Simple_repeat Simple_repeat 1 53 0 2 636 23 0 0 0 chr3L 6787057 6787080 -17756477 + AT_rich Low_complexity Low_complexity 1 23 0 2 636 24 67 0 0 chr3L 6787335 6787380 -17756177 + AT_rich Low_complexity Low_complexity 1 45 0 2 636 201 203 0 78 chr3L 6787968 6788032 -17755525 + A-rich Low_complexity Low_complexity 1 59 0 2 636 198 71 0 0 chr3L 6789492 6789520 -17754037 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 636 237 307 11 0 chr3L 6790346 6790434 -17753123 + (CAG)n Simple_repeat Simple_repeat 3 91 0 2 636 31 0 0 0 chr3L 6790683 6790714 -17752843 + AT_rich Low_complexity Low_complexity 1 31 0 2 636 21 0 0 75 chr3L 6790722 6790762 -17752795 + AT_rich Low_complexity Low_complexity 1 37 0 2 636 216 179 0 0 chr3L 6791478 6791517 -17752040 + (TGG)n Simple_repeat Simple_repeat 2 40 0 2 636 276 172 0 0 chr3L 6793120 6793178 -17750379 + (AACTG)n Simple_repeat Simple_repeat 3 60 0 2 636 30 0 0 0 chr3L 6793770 6793800 -17749757 + AT_rich Low_complexity Low_complexity 1 30 0 2 636 22 0 0 0 chr3L 6795895 6795917 -17747640 + AT_rich Low_complexity Low_complexity 1 22 0 2 636 21 71 0 0 chr3L 6797358 6797400 -17746157 + AT_rich Low_complexity Low_complexity 1 42 0 2 636 32 0 0 0 chr3L 6797856 6797888 -17745669 + AT_rich Low_complexity Low_complexity 1 32 0 2 636 186 43 0 0 chr3L 6798666 6798689 -17744868 + (CAG)n Simple_repeat Simple_repeat 3 25 0 2 636 248 53 26 0 chr3L 6798789 6798827 -17744730 + (AACTG)n Simple_repeat Simple_repeat 2 40 0 2 636 24 0 0 0 chr3L 6799821 6799845 -17743712 + AT_rich Low_complexity Low_complexity 1 24 0 2 636 23 68 0 0 chr3L 6802109 6802153 -17741404 + AT_rich Low_complexity Low_complexity 1 44 0 2 636 24 32 0 0 chr3L 6803516 6803547 -17740010 + AT_rich Low_complexity Low_complexity 1 31 0 2 636 24 67 0 0 chr3L 6804836 6804881 -17738676 + AT_rich Low_complexity Low_complexity 1 45 0 2 636 234 62 0 0 chr3L 6805909 6805941 -17737616 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2 636 27 0 0 0 chr3L 6810306 6810333 -17733224 + AT_rich Low_complexity Low_complexity 1 27 0 2 636 21 57 0 0 chr3L 6812182 6812217 -17731340 + AT_rich Low_complexity Low_complexity 1 35 0 2 636 34 24 0 0 chr3L 6812387 6812428 -17731129 + AT_rich Low_complexity Low_complexity 1 41 0 2 636 212 231 0 0 chr3L 6812732 6812784 -17730773 + (GGATG)n Simple_repeat Simple_repeat 4 55 0 2 636 228 143 0 0 chr3L 6814030 6814072 -17729485 + (ACTG)n Simple_repeat Simple_repeat 4 45 0 2 636 26 0 0 0 chr3L 6814855 6814881 -17728676 + AT_rich Low_complexity Low_complexity 1 26 0 2 636 204 152 0 21 chr3L 6815244 6815291 -17728266 + (ATTCG)n Simple_repeat Simple_repeat 5 50 0 2 637 26 30 0 0 chr3L 6817032 6817065 -17726492 + AT_rich Low_complexity Low_complexity 1 33 0 2 637 192 40 0 0 chr3L 6818002 6818027 -17725530 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 637 24 0 0 0 chr3L 6818657 6818681 -17724876 + AT_rich Low_complexity Low_complexity 1 24 0 2 637 234 193 0 0 chr3L 6822048 6822105 -17721452 + (TTG)n Simple_repeat Simple_repeat 3 59 0 2 637 32 0 0 0 chr3L 6822369 6822401 -17721156 + AT_rich Low_complexity Low_complexity 1 32 0 2 637 212 184 0 0 chr3L 6824404 6824442 -17719115 + T-rich Low_complexity Low_complexity 5 42 0 2 637 180 0 0 0 chr3L 6826162 6826182 -17717375 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 637 232 176 0 0 chr3L 6827521 6827572 -17715985 + ROO_I LTR Pao 683 733 -7523 2 637 252 0 0 0 chr3L 6828527 6828555 -17715002 + (A)n Simple_repeat Simple_repeat 1 28 0 2 637 21 0 0 0 chr3L 6829077 6829098 -17714459 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 231 170 0 0 chr3L 6830471 6830518 -17713039 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 637 189 0 0 0 chr3L 6833117 6833138 -17710419 + (AGTTG)n Simple_repeat Simple_repeat 2 22 0 2 637 180 77 0 0 chr3L 6838951 6838977 -17704580 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 637 21 36 0 0 chr3L 6840622 6840650 -17702907 + AT_rich Low_complexity Low_complexity 1 28 0 2 637 231 203 0 0 chr3L 6840912 6840971 -17702586 + CT-rich Low_complexity Low_complexity 1 59 0 2 637 217 175 47 16 chr3L 6842018 6842082 -17701475 + A-rich Low_complexity Low_complexity 1 66 0 2 637 201 74 0 0 chr3L 6842227 6842254 -17701303 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 637 27 29 0 0 chr3L 6844562 6844596 -17698961 + AT_rich Low_complexity Low_complexity 1 34 0 2 637 308 250 0 0 chr3L 6845096 6845180 -17698377 - ROO_I LTR Pao -7524 732 649 2 637 367 257 74 92 chr3L 6845519 6845857 -17697700 - SAR_DM Satellite Satellite -644 828 497 2 637 184 170 0 36 chr3L 6846126 6846181 -17697376 + (CAG)n Simple_repeat Simple_repeat 3 55 0 2 637 22 0 0 0 chr3L 6846324 6846346 -17697211 + AT_rich Low_complexity Low_complexity 1 22 0 2 637 209 125 25 0 chr3L 6846409 6846449 -17697108 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 637 31 26 0 0 chr3L 6846681 6846719 -17696838 + AT_rich Low_complexity Low_complexity 1 38 0 2 637 201 129 0 0 chr3L 6847453 6847484 -17696073 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 637 225 154 0 0 chr3L 6848428 6848467 -17695090 + (CAG)n Simple_repeat Simple_repeat 3 41 0 2 637 43585 1 0 0 chr3L 6849077 6853802 -17689755 + DOC LINE Jockey 2 4724 -1 2 637 213 204 0 0 chr3L 6853969 6854013 -17689544 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 637 24 32 0 0 chr3L 6860688 6860719 -17682838 + AT_rich Low_complexity Low_complexity 1 31 0 2 637 378 139 0 0 chr3L 6860931 6861003 -17682554 + (CAA)n Simple_repeat Simple_repeat 1 72 0 2 637 225 159 0 0 chr3L 6861198 6861242 -17682315 + ROO_I LTR Pao 685 728 -7528 2 637 327 85 0 0 chr3L 6861372 6861419 -17682138 + (CTG)n Simple_repeat Simple_repeat 1 47 0 2 637 249 193 53 0 chr3L 6865380 6865437 -17678120 + ROO_I LTR Pao 684 743 -7513 2 637 209 288 0 0 chr3L 6867581 6867647 -17675910 + T-rich Low_complexity Low_complexity 1 66 0 2 637 22 0 0 0 chr3L 6868901 6868923 -17674634 + AT_rich Low_complexity Low_complexity 1 22 0 2 637 24 53 0 0 chr3L 6874022 6874060 -17669497 + AT_rich Low_complexity Low_complexity 1 38 0 2 637 39 68 0 0 chr3L 6876366 6876440 -17667117 + AT_rich Low_complexity Low_complexity 1 74 0 2 637 21 57 0 0 chr3L 6878766 6878801 -17664756 + AT_rich Low_complexity Low_complexity 1 35 0 2 637 21 36 0 0 chr3L 6878841 6878869 -17664688 + AT_rich Low_complexity Low_complexity 1 28 0 2 637 34 79 0 0 chr3L 6878950 6879026 -17664531 + AT_rich Low_complexity Low_complexity 1 76 0 2 637 27 0 0 0 chr3L 6879655 6879682 -17663875 + AT_rich Low_complexity Low_complexity 1 27 0 2 637 21 0 0 0 chr3L 6879919 6879940 -17663617 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 3960 2 0 2 chr3L 6880672 6881101 -17662456 + ROO_LTR LTR Pao 1 428 0 2 637 54145 1 4 5 chr3L 6881101 6887134 -17656423 + ROO_I LTR Pao 1 6027 -2229 2 637 4745 0 0 0 chr3L 6887131 6887678 -17655879 + ROO_I LTR Pao 7710 8256 0 2 637 3975 5 0 0 chr3L 6887678 6888106 -17655451 + ROO_LTR LTR Pao 1 428 0 2 637 21 36 0 0 chr3L 6888326 6888354 -17655203 + AT_rich Low_complexity Low_complexity 1 28 0 2 637 198 0 0 0 chr3L 6888501 6888523 -17655034 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 637 23 33 0 0 chr3L 6888972 6889002 -17654555 + AT_rich Low_complexity Low_complexity 1 30 0 2 637 21 0 0 0 chr3L 6889368 6889389 -17654168 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 201 162 0 0 chr3L 6889598 6889635 -17653922 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 637 41 58 0 0 chr3L 6890665 6890734 -17652823 + AT_rich Low_complexity Low_complexity 1 69 0 2 637 192 97 0 0 chr3L 6891414 6891445 -17652112 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 637 37 90 0 0 chr3L 6891792 6891892 -17651665 + AT_rich Low_complexity Low_complexity 1 100 0 2 637 189 74 0 0 chr3L 6893661 6893688 -17649869 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 637 231 333 0 0 chr3L 6894541 6894625 -17648932 + (TG)n Simple_repeat Simple_repeat 1 84 0 2 637 21 0 0 0 chr3L 6895515 6895536 -17648021 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 32 0 0 0 chr3L 6900534 6900566 -17642991 + AT_rich Low_complexity Low_complexity 1 32 0 2 637 209 235 0 29 chr3L 6900772 6900842 -17642715 + (TTG)n Simple_repeat Simple_repeat 1 68 0 2 637 213 150 25 0 chr3L 6901367 6901407 -17642150 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 637 29 47 0 0 chr3L 6901834 6901877 -17641680 + AT_rich Low_complexity Low_complexity 1 43 0 2 637 22 35 0 0 chr3L 6903972 6904001 -17639556 + AT_rich Low_complexity Low_complexity 1 29 0 2 637 235 258 0 46 chr3L 6904222 6904287 -17639270 + C-rich Low_complexity Low_complexity 3 64 0 2 637 23 0 0 0 chr3L 6904852 6904875 -17638682 + AT_rich Low_complexity Low_complexity 1 23 0 2 637 31 26 0 0 chr3L 6904940 6904978 -17638579 + AT_rich Low_complexity Low_complexity 1 38 0 2 637 26 0 0 0 chr3L 6905117 6905143 -17638414 + AT_rich Low_complexity Low_complexity 1 26 0 2 637 21 57 0 0 chr3L 6907470 6907505 -17636052 + AT_rich Low_complexity Low_complexity 1 35 0 2 637 24 0 0 0 chr3L 6908861 6908885 -17634672 + AT_rich Low_complexity Low_complexity 1 24 0 2 637 229 118 19 19 chr3L 6909543 6909595 -17633962 + (CAAA)n Simple_repeat Simple_repeat 3 54 0 2 637 221 161 16 31 chr3L 6909966 6910030 -17633527 + A-rich Low_complexity Low_complexity 1 63 0 2 637 246 32 0 0 chr3L 6910254 6910285 -17633272 + (GGTTG)n Simple_repeat Simple_repeat 2 32 0 2 637 22 0 0 0 chr3L 6911568 6911590 -17631967 + AT_rich Low_complexity Low_complexity 1 22 0 2 637 24 0 0 0 chr3L 6912291 6912315 -17631242 + AT_rich Low_complexity Low_complexity 1 24 0 2 637 28 48 0 0 chr3L 6914110 6914152 -17629405 + AT_rich Low_complexity Low_complexity 1 42 0 2 637 26 111 0 0 chr3L 6915497 6915614 -17627943 + AT_rich Low_complexity Low_complexity 1 117 0 2 637 180 125 0 0 chr3L 6918253 6918285 -17625272 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 637 182 91 30 0 chr3L 6919046 6919079 -17624478 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 637 24 32 0 0 chr3L 6920837 6920868 -17622689 + AT_rich Low_complexity Low_complexity 1 31 0 2 637 201 39 0 0 chr3L 6921543 6921569 -17621988 + (CAACT)n Simple_repeat Simple_repeat 1 26 0 2 637 222 37 0 0 chr3L 6922877 6922904 -17620653 + (CAT)n Simple_repeat Simple_repeat 1 27 0 2 637 207 0 0 0 chr3L 6925926 6925949 -17617608 + (A)n Simple_repeat Simple_repeat 1 23 0 2 637 224 161 16 16 chr3L 6927477 6927499 -17616058 + (TTA)n Simple_repeat Simple_repeat 3 25 0 2 637 298 0 48 0 chr3L 6927499 6927541 -17616016 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 637 224 161 16 16 chr3L 6927541 6927581 -17615976 + (TTA)n Simple_repeat Simple_repeat 3 41 0 2 637 30 0 0 0 chr3L 6927924 6927954 -17615603 + AT_rich Low_complexity Low_complexity 1 30 0 2 637 240 100 0 0 chr3L 6930114 6930154 -17613403 + (CAACG)n Simple_repeat Simple_repeat 3 42 0 2 637 39 0 0 0 chr3L 6931939 6931978 -17611579 + AT_rich Low_complexity Low_complexity 1 39 0 2 637 24 67 0 0 chr3L 6933163 6933208 -17610349 + AT_rich Low_complexity Low_complexity 1 45 0 2 637 21 0 0 0 chr3L 6934362 6934383 -17609174 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 22 35 0 0 chr3L 6934845 6934874 -17608683 + AT_rich Low_complexity Low_complexity 1 29 0 2 637 21 0 0 0 chr3L 6935317 6935338 -17608219 + AT_rich Low_complexity Low_complexity 1 21 0 2 637 201 94 0 0 chr3L 6936668 6936700 -17606857 + (TC)n Simple_repeat Simple_repeat 2 33 0 2 637 200 224 0 17 chr3L 6937669 6937728 -17605829 + A-rich Low_complexity Low_complexity 3 60 0 2 637 186 208 0 0 chr3L 6938313 6938361 -17605196 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 637 25 0 0 0 chr3L 6939100 6939125 -17604432 + AT_rich Low_complexity Low_complexity 1 25 0 2 637 26 64 0 0 chr3L 6939836 6939883 -17603674 + AT_rich Low_complexity Low_complexity 1 47 0 2 637 231 244 0 103 chr3L 6940677 6940764 -17602793 + TART_B1 LINE telomeric 152 229 -10425 2 637 382 189 0 54 chr3L 6940812 6940924 -17602633 + ROO_I LTR Pao 641 746 -7510 2 637 180 184 0 0 chr3L 6941762 6941811 -17601746 + A-rich Low_complexity Low_complexity 1 49 0 2 637 25 0 0 0 chr3L 6942431 6942456 -17601101 + AT_rich Low_complexity Low_complexity 1 25 0 2 637 204 97 0 0 chr3L 6942476 6942507 -17601050 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 637 225 0 0 0 chr3L 6943129 6943154 -17600403 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2 637 186 43 0 0 chr3L 6943631 6943654 -17599903 + (CTG)n Simple_repeat Simple_repeat 1 23 0 2 637 195 42 0 0 chr3L 6943972 6943996 -17599561 + (CTG)n Simple_repeat Simple_repeat 1 24 0 2 637 24 0 0 0 chr3L 6944879 6944903 -17598654 + AT_rich Low_complexity Low_complexity 1 24 0 2 637 24 67 0 0 chr3L 6946339 6946384 -17597173 + AT_rich Low_complexity Low_complexity 1 45 0 2 638 22 0 0 0 chr3L 6948724 6948746 -17594811 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 23 33 0 0 chr3L 6948757 6948787 -17594770 + AT_rich Low_complexity Low_complexity 1 30 0 2 638 22 0 0 0 chr3L 6949138 6949160 -17594397 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 23 33 0 0 chr3L 6950952 6950982 -17592575 + AT_rich Low_complexity Low_complexity 1 30 0 2 638 22 0 0 0 chr3L 6952651 6952673 -17590884 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 201 39 0 0 chr3L 6957397 6957423 -17586134 + (TC)n Simple_repeat Simple_repeat 2 27 0 2 638 30 27 0 0 chr3L 6961140 6961177 -17582380 + AT_rich Low_complexity Low_complexity 1 37 0 2 638 24 32 0 0 chr3L 6962050 6962081 -17581476 + AT_rich Low_complexity Low_complexity 1 31 0 2 638 22 0 0 0 chr3L 6962575 6962597 -17580960 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 21 0 0 0 chr3L 6968017 6968038 -17575519 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 24 53 0 0 chr3L 6968855 6968893 -17574664 + AT_rich Low_complexity Low_complexity 1 38 0 2 638 219 88 0 0 chr3L 6970230 6970264 -17573293 + (T)n Simple_repeat Simple_repeat 1 34 0 2 638 23 33 0 0 chr3L 6970625 6970655 -17572902 + AT_rich Low_complexity Low_complexity 1 30 0 2 638 267 79 0 0 chr3L 6971770 6971808 -17571749 + (TATG)n Simple_repeat Simple_repeat 2 39 0 2 638 250 156 15 15 chr3L 6972897 6972962 -17570595 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 638 27 62 0 0 chr3L 6973883 6973931 -17569626 + AT_rich Low_complexity Low_complexity 1 48 0 2 638 24 77 0 0 chr3L 6973955 6974007 -17569550 + AT_rich Low_complexity Low_complexity 1 52 0 2 638 21 36 0 0 chr3L 6975154 6975182 -17568375 + AT_rich Low_complexity Low_complexity 1 28 0 2 638 315 49 0 0 chr3L 6979087 6979128 -17564429 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 638 180 0 0 0 chr3L 6979387 6979407 -17564150 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 638 22 70 0 0 chr3L 6979585 6979628 -17563929 + AT_rich Low_complexity Low_complexity 1 43 0 2 638 22 0 0 0 chr3L 6981297 6981319 -17562238 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 189 121 0 0 chr3L 6981628 6981661 -17561896 + (A)n Simple_repeat Simple_repeat 1 33 0 2 638 183 100 0 0 chr3L 6981905 6981935 -17561622 + (A)n Simple_repeat Simple_repeat 1 30 0 2 638 23 0 0 0 chr3L 6982463 6982486 -17561071 + AT_rich Low_complexity Low_complexity 1 23 0 2 638 27 81 0 0 chr3L 6983256 6983318 -17560239 + AT_rich Low_complexity Low_complexity 1 62 0 2 638 24 67 0 0 chr3L 6983844 6983889 -17559668 + AT_rich Low_complexity Low_complexity 1 45 0 2 638 28 0 0 0 chr3L 6985562 6985590 -17557967 + AT_rich Low_complexity Low_complexity 1 28 0 2 638 5026 18 0 0 chr3L 6988039 6988595 -17554962 - BS LINE Jockey -3 5123 4568 2 638 237 139 0 0 chr3L 6990758 6990801 -17552756 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 638 22 0 0 0 chr3L 6997670 6997692 -17545865 + AT_rich Low_complexity Low_complexity 1 22 0 2 638 24 53 0 0 chr3L 7000597 7000635 -17542922 + AT_rich Low_complexity Low_complexity 1 38 0 2 638 219 69 0 0 chr3L 7002508 7002537 -17541020 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 638 26 0 0 0 chr3L 7002707 7002733 -17540824 + AT_rich Low_complexity Low_complexity 1 26 0 2 638 23 0 0 0 chr3L 7002827 7002850 -17540707 + AT_rich Low_complexity Low_complexity 1 23 0 2 638 210 271 0 12 chr3L 7007285 7007371 -17536186 + (TCG)n Simple_repeat Simple_repeat 3 87 0 2 638 195 100 0 0 chr3L 7007390 7007420 -17536137 + (CTA)n Simple_repeat Simple_repeat 2 31 0 2 638 21 0 0 0 chr3L 7008858 7008879 -17534678 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 221 211 0 19 chr3L 7010217 7010270 -17533287 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 638 250 239 0 15 chr3L 7011371 7011439 -17532118 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 638 205 29 59 0 chr3L 7013389 7013423 -17530134 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 638 208 121 0 0 chr3L 7017258 7017291 -17526266 + (CCGAA)n Simple_repeat Simple_repeat 3 35 0 2 638 23 0 0 0 chr3L 7019537 7019560 -17523997 + AT_rich Low_complexity Low_complexity 1 23 0 2 638 197 65 32 0 chr3L 7020545 7020576 -17522981 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2 638 212 245 0 0 chr3L 7020712 7020761 -17522796 + (TATG)n Simple_repeat Simple_repeat 1 49 0 2 638 21 36 0 0 chr3L 7021332 7021360 -17522197 + AT_rich Low_complexity Low_complexity 1 28 0 2 638 235 288 12 0 chr3L 7022563 7022643 -17520914 + (ATG)n Simple_repeat Simple_repeat 3 83 0 2 638 31 68 0 0 chr3L 7022952 7023011 -17520546 + AT_rich Low_complexity Low_complexity 1 59 0 2 638 49 43 0 0 chr3L 7025915 7025985 -17517572 + AT_rich Low_complexity Low_complexity 1 70 0 2 638 25 0 0 0 chr3L 7027576 7027601 -17515956 + AT_rich Low_complexity Low_complexity 1 25 0 2 638 198 0 0 0 chr3L 7029993 7030015 -17513542 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 638 33 73 0 0 chr3L 7036982 7037050 -17506507 + AT_rich Low_complexity Low_complexity 1 68 0 2 638 24 0 0 0 chr3L 7041218 7041242 -17502315 + AT_rich Low_complexity Low_complexity 1 24 0 2 638 21 36 0 0 chr3L 7044548 7044576 -17498981 + AT_rich Low_complexity Low_complexity 1 28 0 2 638 213 139 0 0 chr3L 7045631 7045674 -17497883 + (A)n Simple_repeat Simple_repeat 1 43 0 2 638 189 74 0 0 chr3L 7046502 7046529 -17497028 + (GAGAA)n Simple_repeat Simple_repeat 3 29 0 2 638 213 205 0 0 chr3L 7047918 7047957 -17495600 + (TTCTG)n Simple_repeat Simple_repeat 2 40 0 2 638 221 220 17 17 chr3L 7049571 7049631 -17493926 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 2 638 30 0 0 0 chr3L 7050211 7050241 -17493316 + AT_rich Low_complexity Low_complexity 1 30 0 2 638 22 56 0 0 chr3L 7051800 7051836 -17491721 + AT_rich Low_complexity Low_complexity 1 36 0 2 638 21 95 0 0 chr3L 7052014 7052077 -17491480 + AT_rich Low_complexity Low_complexity 1 63 0 2 638 29 47 0 0 chr3L 7064393 7064436 -17479121 + AT_rich Low_complexity Low_complexity 1 43 0 2 638 231 193 0 34 chr3L 7066248 7066307 -17477250 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 2 638 202 264 21 42 chr3L 7066490 7066585 -17476972 + T-rich Low_complexity Low_complexity 1 93 0 2 638 267 93 0 0 chr3L 7069254 7069297 -17474260 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 638 21 0 0 0 chr3L 7074771 7074792 -17468765 + AT_rich Low_complexity Low_complexity 1 21 0 2 638 23 0 0 0 chr3L 7077037 7077060 -17466497 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 23 54 0 0 chr3L 7078568 7078605 -17464952 + AT_rich Low_complexity Low_complexity 1 37 0 2 639 276 53 0 0 chr3L 7080987 7081025 -17462532 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 639 23 33 0 0 chr3L 7082717 7082747 -17460810 + AT_rich Low_complexity Low_complexity 1 30 0 2 639 180 77 0 0 chr3L 7084923 7084949 -17458608 + (GTCTG)n Simple_repeat Simple_repeat 5 30 0 2 639 22 70 0 0 chr3L 7085206 7085249 -17458308 + AT_rich Low_complexity Low_complexity 1 43 0 2 639 21 36 0 0 chr3L 7085279 7085307 -17458250 + AT_rich Low_complexity Low_complexity 1 28 0 2 639 33 25 0 0 chr3L 7089057 7089097 -17454460 + AT_rich Low_complexity Low_complexity 1 40 0 2 639 186 71 0 0 chr3L 7091112 7091140 -17452417 + (A)n Simple_repeat Simple_repeat 1 28 0 2 639 22 35 0 0 chr3L 7097323 7097352 -17446205 + AT_rich Low_complexity Low_complexity 1 29 0 2 639 22 0 0 0 chr3L 7100208 7100230 -17443327 + AT_rich Low_complexity Low_complexity 1 22 0 2 639 21 57 0 0 chr3L 7101655 7101690 -17441867 + AT_rich Low_complexity Low_complexity 1 35 0 2 639 213 159 68 0 chr3L 7105117 7105161 -17438396 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 2 639 255 259 0 0 chr3L 7107064 7107122 -17436435 + (ACCG)n Simple_repeat Simple_repeat 2 59 0 2 639 31 26 0 0 chr3L 7107873 7107911 -17435646 + AT_rich Low_complexity Low_complexity 1 38 0 2 639 235 261 0 64 chr3L 7111623 7111717 -17431840 + (CCA)n Simple_repeat Simple_repeat 2 89 0 2 639 183 42 0 0 chr3L 7113879 7113903 -17429654 + (TCTA)n Simple_repeat Simple_repeat 3 26 0 2 639 210 37 0 0 chr3L 7116397 7116424 -17427133 + (A)n Simple_repeat Simple_repeat 1 27 0 2 639 35 24 0 0 chr3L 7122844 7122886 -17420671 + AT_rich Low_complexity Low_complexity 1 42 0 2 639 186 71 0 0 chr3L 7123110 7123138 -17420419 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2 639 842 0 0 0 chr3L 7123138 7123236 -17420321 - BS LINE Jockey -28 5098 5001 2 639 189 0 0 0 chr3L 7123526 7123547 -17420010 + (CTTTA)n Simple_repeat Simple_repeat 3 23 0 2 639 212 269 0 0 chr3L 7127686 7127738 -17415819 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 639 214 280 27 0 chr3L 7128061 7128136 -17415421 + (CAA)n Simple_repeat Simple_repeat 2 78 0 2 639 284 102 0 20 chr3L 7130837 7130887 -17412670 + (CTG)n Simple_repeat Simple_repeat 2 50 0 2 639 186 209 0 0 chr3L 7131017 7131060 -17412497 + (TCCG)n Simple_repeat Simple_repeat 3 45 0 2 639 206 140 39 20 chr3L 7135959 7136010 -17407547 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 639 276 30 0 0 chr3L 7142657 7142690 -17400867 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 639 26 0 0 0 chr3L 7143088 7143114 -17400443 + AT_rich Low_complexity Low_complexity 1 26 0 2 639 183 100 0 0 chr3L 7145023 7145053 -17398504 + (A)n Simple_repeat Simple_repeat 1 30 0 2 639 238 211 0 0 chr3L 7145432 7145484 -17398073 + T-rich Low_complexity Low_complexity 1 52 0 2 639 235 241 0 0 chr3L 7149103 7149157 -17394400 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 2 639 24 53 0 0 chr3L 7150402 7150440 -17393117 + AT_rich Low_complexity Low_complexity 1 38 0 2 639 209 200 0 0 chr3L 7151965 7152015 -17391542 + A-rich Low_complexity Low_complexity 1 50 0 2 639 25 31 0 0 chr3L 7152270 7152302 -17391255 + AT_rich Low_complexity Low_complexity 1 32 0 2 639 189 154 0 0 chr3L 7154517 7154556 -17389001 + (TTG)n Simple_repeat Simple_repeat 3 41 0 2 639 564 111 0 0 chr3L 7154603 7154702 -17388855 + (CTG)n Simple_repeat Simple_repeat 1 99 0 2 639 207 0 0 0 chr3L 7155603 7155626 -17387931 + (CTG)n Simple_repeat Simple_repeat 1 23 0 2 639 216 265 12 0 chr3L 7156058 7156141 -17387416 + (TTG)n Simple_repeat Simple_repeat 3 86 0 2 639 191 36 0 35 chr3L 7157402 7157431 -17386126 + (TGG)n Simple_repeat Simple_repeat 1 28 0 2 639 192 40 0 0 chr3L 7161692 7161717 -17381840 + (T)n Simple_repeat Simple_repeat 1 25 0 2 639 21 36 0 0 chr3L 7162294 7162322 -17381235 + AT_rich Low_complexity Low_complexity 1 28 0 2 639 28 0 0 0 chr3L 7162581 7162609 -17380948 + AT_rich Low_complexity Low_complexity 1 28 0 2 639 21 0 0 0 chr3L 7163272 7163293 -17380264 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 22 35 0 0 chr3L 7165294 7165323 -17378234 + AT_rich Low_complexity Low_complexity 1 29 0 2 639 210 204 20 0 chr3L 7166894 7166943 -17376614 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 639 186 43 0 0 chr3L 7168870 7168893 -17374664 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 639 234 116 0 0 chr3L 7170919 7170962 -17372595 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 639 183 167 0 0 chr3L 7172549 7172591 -17370966 + A-rich Low_complexity Low_complexity 1 42 0 2 639 25 31 0 0 chr3L 7173917 7173949 -17369608 + AT_rich Low_complexity Low_complexity 1 32 0 2 639 21 0 0 0 chr3L 7175926 7175947 -17367610 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 201 74 0 0 chr3L 7176394 7176421 -17367136 + (AGCTG)n Simple_repeat Simple_repeat 2 28 0 2 639 32 0 0 0 chr3L 7176654 7176686 -17366871 + AT_rich Low_complexity Low_complexity 1 32 0 2 639 255 133 0 0 chr3L 7177707 7177752 -17365805 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 639 272 301 0 0 chr3L 7177964 7178057 -17365500 + T-rich Low_complexity Low_complexity 1 93 0 2 639 29 47 0 0 chr3L 7179000 7179043 -17364514 + AT_rich Low_complexity Low_complexity 1 43 0 2 639 24 32 0 0 chr3L 7179649 7179680 -17363877 + AT_rich Low_complexity Low_complexity 1 31 0 2 639 40 0 0 0 chr3L 7181214 7181254 -17362303 + AT_rich Low_complexity Low_complexity 1 40 0 2 639 41 36 0 0 chr3L 7181562 7181617 -17361940 + AT_rich Low_complexity Low_complexity 1 55 0 2 639 189 0 0 0 chr3L 7184202 7184223 -17359334 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 639 243 280 0 0 chr3L 7184245 7184320 -17359237 + (ATGGTG)n Simple_repeat Simple_repeat 1 75 0 2 639 299 302 0 0 chr3L 7184681 7184767 -17358790 + (ACTG)n Simple_repeat Simple_repeat 1 86 0 2 639 195 186 0 0 chr3L 7186144 7186187 -17357370 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 639 23 0 0 0 chr3L 7186614 7186637 -17356920 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 21 0 0 0 chr3L 7188305 7188326 -17355231 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 216 111 0 0 chr3L 7189427 7189463 -17354094 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 639 21 0 0 0 chr3L 7189605 7189626 -17353931 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 226 288 0 0 chr3L 7193058 7193138 -17350419 + T-rich Low_complexity Low_complexity 1 80 0 2 639 210 194 0 0 chr3L 7194514 7194576 -17348981 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 639 24 0 0 0 chr3L 7196123 7196147 -17347410 + AT_rich Low_complexity Low_complexity 1 24 0 2 639 26 0 0 0 chr3L 7196807 7196833 -17346724 + AT_rich Low_complexity Low_complexity 1 26 0 2 639 264 137 0 0 chr3L 7197120 7197171 -17346386 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 639 195 139 0 0 chr3L 7197349 7197385 -17346172 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 639 231 214 0 0 chr3L 7198503 7198545 -17345012 + (CAA)n Simple_repeat Simple_repeat 1 42 0 2 639 225 312 0 15 chr3L 7201035 7201100 -17342457 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 639 29 0 0 0 chr3L 7201213 7201242 -17342315 + AT_rich Low_complexity Low_complexity 1 29 0 2 639 218 197 0 43 chr3L 7205478 7205547 -17338010 + T-rich Low_complexity Low_complexity 4 69 0 2 639 23 0 0 0 chr3L 7205922 7205945 -17337612 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 216 111 0 0 chr3L 7206189 7206225 -17337332 + (CAATG)n Simple_repeat Simple_repeat 5 40 0 2 639 207 69 0 0 chr3L 7207231 7207260 -17336297 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 640 180 111 0 0 chr3L 7209526 7209553 -17334004 + (CAG)n Simple_repeat Simple_repeat 3 29 0 2 640 248 167 0 0 chr3L 7212081 7212129 -17331428 + ROO_I LTR Pao 679 726 -7530 2 640 219 69 0 0 chr3L 7213385 7213414 -17330143 + (TATG)n Simple_repeat Simple_repeat 2 30 0 2 640 207 114 0 0 chr3L 7214899 7214934 -17328623 + (A)n Simple_repeat Simple_repeat 1 35 0 2 640 221 291 0 0 chr3L 7215819 7215874 -17327683 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 640 202 171 49 0 chr3L 7217850 7217891 -17325666 + (CTTTG)n Simple_repeat Simple_repeat 2 44 0 2 640 264 154 0 0 chr3L 7218484 7218536 -17325021 + CT-rich Low_complexity Low_complexity 2 53 0 2 640 195 69 0 0 chr3L 7219921 7219950 -17323607 + (CCAA)n Simple_repeat Simple_repeat 4 32 0 2 640 252 182 0 35 chr3L 7222634 7222691 -17320866 + (CAG)n Simple_repeat Simple_repeat 3 57 0 2 640 216 233 22 11 chr3L 7223862 7223953 -17319604 + (TA)n Simple_repeat Simple_repeat 2 93 0 2 640 240 35 0 0 chr3L 7224263 7224292 -17319265 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 640 23 0 0 0 chr3L 7225211 7225234 -17318323 + AT_rich Low_complexity Low_complexity 1 23 0 2 640 23 68 0 0 chr3L 7227620 7227664 -17315893 + AT_rich Low_complexity Low_complexity 1 44 0 2 640 23 33 0 0 chr3L 7228990 7229020 -17314537 + AT_rich Low_complexity Low_complexity 1 30 0 2 640 30 45 0 0 chr3L 7229069 7229113 -17314444 + AT_rich Low_complexity Low_complexity 1 44 0 2 640 28 0 0 0 chr3L 7229729 7229757 -17313800 + AT_rich Low_complexity Low_complexity 1 28 0 2 640 22 0 0 0 chr3L 7237253 7237275 -17306282 + AT_rich Low_complexity Low_complexity 1 22 0 2 640 25 0 0 0 chr3L 7246641 7246666 -17296891 + AT_rich Low_complexity Low_complexity 1 25 0 2 640 246 128 0 0 chr3L 7249209 7249248 -17294309 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 640 210 118 0 0 chr3L 7252545 7252579 -17290978 + (GATTG)n Simple_repeat Simple_repeat 3 36 0 2 640 22 0 0 0 chr3L 7253600 7253622 -17289935 + AT_rich Low_complexity Low_complexity 1 22 0 2 640 183 139 0 0 chr3L 7256671 7256707 -17286850 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 640 24 77 0 0 chr3L 7257419 7257471 -17286086 + AT_rich Low_complexity Low_complexity 1 52 0 2 640 44 46 0 0 chr3L 7258072 7258137 -17285420 + AT_rich Low_complexity Low_complexity 1 65 0 2 640 180 152 0 0 chr3L 7259962 7259995 -17283562 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 640 180 125 0 0 chr3L 7260235 7260267 -17283290 + (TTTAA)n Simple_repeat Simple_repeat 2 33 0 2 640 213 39 0 0 chr3L 7260948 7260974 -17282583 + (TTTAG)n Simple_repeat Simple_repeat 3 28 0 2 640 22 35 0 0 chr3L 7266152 7266181 -17277376 + AT_rich Low_complexity Low_complexity 1 29 0 2 640 202 189 0 0 chr3L 7267683 7267720 -17275837 + (CGG)n Simple_repeat Simple_repeat 3 39 0 2 640 189 175 0 0 chr3L 7268731 7268771 -17274786 + (CGAAT)n Simple_repeat Simple_repeat 3 42 0 2 640 231 133 0 0 chr3L 7269058 7269103 -17274454 + (ATGGTG)n Simple_repeat Simple_repeat 4 48 0 2 640 189 154 0 0 chr3L 7269831 7269870 -17273687 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 640 27 29 0 0 chr3L 7270322 7270356 -17273201 + AT_rich Low_complexity Low_complexity 1 34 0 2 640 21 0 0 0 chr3L 7270722 7270743 -17272814 + AT_rich Low_complexity Low_complexity 1 21 0 2 640 201 132 0 0 chr3L 7273326 7273364 -17270193 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 640 21 0 0 0 chr3L 7277176 7277197 -17266360 + AT_rich Low_complexity Low_complexity 1 21 0 2 640 30 27 0 0 chr3L 7277653 7277690 -17265867 + AT_rich Low_complexity Low_complexity 1 37 0 2 640 281 170 0 174 chr3L 7277867 7277988 -17265569 - ROO_I LTR Pao -7517 739 640 2 640 22 0 0 0 chr3L 7278549 7278571 -17264986 + AT_rich Low_complexity Low_complexity 1 22 0 2 640 220 209 0 0 chr3L 7282430 7282473 -17261084 + (CAT)n Simple_repeat Simple_repeat 3 45 0 2 640 209 119 24 0 chr3L 7283680 7283722 -17259835 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 640 225 0 0 0 chr3L 7287934 7287959 -17255598 + (AGTTG)n Simple_repeat Simple_repeat 1 25 0 2 640 204 190 0 65 chr3L 7289960 7290022 -17253535 + A-rich Low_complexity Low_complexity 2 59 0 2 640 27 29 0 0 chr3L 7290737 7290771 -17252786 + AT_rich Low_complexity Low_complexity 1 34 0 2 640 195 42 0 0 chr3L 7292046 7292070 -17251487 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 640 208 121 0 0 chr3L 7292846 7292879 -17250678 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 640 180 77 0 0 chr3L 7293322 7293348 -17250209 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 640 224 238 16 0 chr3L 7294701 7294764 -17248793 + (TTTG)n Simple_repeat Simple_repeat 3 66 0 2 640 272 91 23 0 chr3L 7298134 7298178 -17245379 + (ACTG)n Simple_repeat Simple_repeat 4 48 0 2 640 23 33 0 0 chr3L 7298953 7298983 -17244574 + AT_rich Low_complexity Low_complexity 1 30 0 2 640 207 0 0 0 chr3L 7299471 7299494 -17244063 + (A)n Simple_repeat Simple_repeat 1 23 0 2 640 209 217 0 0 chr3L 7303614 7303660 -17239897 + A-rich Low_complexity Low_complexity 1 46 0 2 640 192 77 0 0 chr3L 7304118 7304144 -17239413 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 640 21 0 0 0 chr3L 7305506 7305527 -17238030 + AT_rich Low_complexity Low_complexity 1 21 0 2 640 27 62 0 0 chr3L 7306582 7306630 -17236927 + AT_rich Low_complexity Low_complexity 1 48 0 2 640 210 136 0 0 chr3L 7306905 7306949 -17236608 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 640 27 0 0 0 chr3L 7312862 7312889 -17230668 + AT_rich Low_complexity Low_complexity 1 27 0 2 640 198 0 0 0 chr3L 7314823 7314845 -17228712 + (GGA)n Simple_repeat Simple_repeat 2 23 0 2 640 24 53 0 0 chr3L 7316644 7316682 -17226875 + AT_rich Low_complexity Low_complexity 1 38 0 2 640 32 26 0 0 chr3L 7322087 7322126 -17221431 + AT_rich Low_complexity Low_complexity 1 39 0 2 640 21 82 0 0 chr3L 7328439 7328488 -17215069 + AT_rich Low_complexity Low_complexity 1 49 0 2 640 202 182 0 0 chr3L 7331616 7331649 -17211908 + (CTG)n Simple_repeat Simple_repeat 2 34 0 2 640 21 0 0 0 chr3L 7333032 7333053 -17210504 + AT_rich Low_complexity Low_complexity 1 21 0 2 640 183 42 0 0 chr3L 7333056 7333080 -17210477 + (CCG)n Simple_repeat Simple_repeat 3 26 0 2 640 195 42 0 0 chr3L 7337694 7337718 -17205839 + (T)n Simple_repeat Simple_repeat 1 24 0 2 641 212 184 0 0 chr3L 7341672 7341710 -17201847 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 641 188 86 29 0 chr3L 7346396 7346431 -17197126 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 641 204 111 0 0 chr3L 7349309 7349345 -17194212 + (TCC)n Simple_repeat Simple_repeat 1 36 0 2 641 280 133 0 22 chr3L 7349955 7350001 -17193556 - QUASIMODO_LTR LTR Gypsy -390 268 224 2 641 1951 76 40 27 chr3L 7349982 7350279 -17193278 - QUASIMODO_LTR LTR Gypsy -293 365 65 2 641 23 0 0 0 chr3L 7353420 7353443 -17190114 + AT_rich Low_complexity Low_complexity 1 23 0 2 641 189 0 0 0 chr3L 7353443 7353464 -17190093 + (TA)n Simple_repeat Simple_repeat 1 21 0 2 641 189 107 0 0 chr3L 7357155 7357183 -17186374 + (CGGA)n Simple_repeat Simple_repeat 3 30 0 2 641 215 237 17 0 chr3L 7358240 7358299 -17185258 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 641 180 152 0 0 chr3L 7361566 7361599 -17181958 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 641 27 0 0 0 chr3L 7362537 7362564 -17180993 + AT_rich Low_complexity Low_complexity 1 27 0 2 641 21 0 0 0 chr3L 7362696 7362717 -17180840 + AT_rich Low_complexity Low_complexity 1 21 0 3 641 318 162 9 87 chr3L 7365785 7365900 -17177657 + A-rich Low_complexity Low_complexity 1 106 0 3 641 194 0 0 37 chr3L 7366713 7366740 -17176817 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 641 3605 5 7 7 chr3L 7370470 7370884 -17172673 + DM297_LTR LTR Gypsy 1 414 0 3 641 6988 8 1 2 chr3L 7370884 7371685 -17171872 + DM297_I LTR Gypsy 1 800 -5367 3 641 12421 6 0 1 chr3L 7371680 7373104 -17170453 + DM297_I LTR Gypsy 4745 6167 0 3 641 3605 5 7 7 chr3L 7373104 7373518 -17170039 + DM297_LTR LTR Gypsy 1 414 0 3 641 21 0 0 0 chr3L 7374808 7374829 -17168728 + AT_rich Low_complexity Low_complexity 1 21 0 3 641 24 32 0 0 chr3L 7381394 7381425 -17162132 + AT_rich Low_complexity Low_complexity 1 31 0 3 641 21 0 0 0 chr3L 7381546 7381567 -17161990 + AT_rich Low_complexity Low_complexity 1 21 0 3 641 26 30 0 0 chr3L 7383849 7383882 -17159675 + AT_rich Low_complexity Low_complexity 1 33 0 3 641 246 233 14 0 chr3L 7384333 7384406 -17159151 + (CAAA)n Simple_repeat Simple_repeat 1 74 0 3 641 21 36 0 0 chr3L 7384495 7384523 -17159034 + AT_rich Low_complexity Low_complexity 1 28 0 3 641 26 0 0 0 chr3L 7384643 7384669 -17158888 + AT_rich Low_complexity Low_complexity 1 26 0 3 641 22 0 0 0 chr3L 7385058 7385080 -17158477 + AT_rich Low_complexity Low_complexity 1 22 0 3 641 29 0 0 0 chr3L 7386626 7386655 -17156902 + AT_rich Low_complexity Low_complexity 1 29 0 3 641 22 35 0 0 chr3L 7387471 7387500 -17156057 + AT_rich Low_complexity Low_complexity 1 29 0 3 641 21 0 0 0 chr3L 7387803 7387824 -17155733 + AT_rich Low_complexity Low_complexity 1 21 0 3 641 23 86 0 0 chr3L 7388447 7388505 -17155052 + AT_rich Low_complexity Low_complexity 1 58 0 3 641 23 0 0 0 chr3L 7388563 7388586 -17154971 + AT_rich Low_complexity Low_complexity 1 23 0 3 641 24 53 0 0 chr3L 7390864 7390902 -17152655 + AT_rich Low_complexity Low_complexity 1 38 0 3 641 21 36 0 0 chr3L 7392818 7392846 -17150711 + AT_rich Low_complexity Low_complexity 1 28 0 3 641 29 28 0 0 chr3L 7393275 7393311 -17150246 + AT_rich Low_complexity Low_complexity 1 36 0 3 641 31 26 0 0 chr3L 7394244 7394282 -17149275 + AT_rich Low_complexity Low_complexity 1 38 0 3 641 24 53 0 0 chr3L 7395049 7395087 -17148470 + AT_rich Low_complexity Low_complexity 1 38 0 3 641 224 87 0 61 chr3L 7397752 7397801 -17145756 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 3 641 28 0 0 0 chr3L 7400950 7400978 -17142579 + AT_rich Low_complexity Low_complexity 1 28 0 3 641 27 49 0 0 chr3L 7401128 7401169 -17142388 + AT_rich Low_complexity Low_complexity 1 41 0 3 641 249 33 0 0 chr3L 7401234 7401264 -17142293 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 641 24 53 0 0 chr3L 7401672 7401710 -17141847 + AT_rich Low_complexity Low_complexity 1 38 0 3 641 30 69 0 0 chr3L 7404205 7404263 -17139294 + AT_rich Low_complexity Low_complexity 1 58 0 3 641 23 0 0 0 chr3L 7405079 7405102 -17138455 + AT_rich Low_complexity Low_complexity 1 23 0 3 641 180 0 0 0 chr3L 7405941 7405961 -17137596 + (G)n Simple_repeat Simple_repeat 1 20 0 3 641 201 94 0 0 chr3L 7408109 7408141 -17135416 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 641 191 103 26 0 chr3L 7408939 7408978 -17134579 + (TTTTTG)n Simple_repeat Simple_repeat 5 44 0 3 641 26 0 0 0 chr3L 7410155 7410181 -17133376 + AT_rich Low_complexity Low_complexity 1 26 0 3 641 28 29 0 0 chr3L 7414896 7414931 -17128626 + AT_rich Low_complexity Low_complexity 1 35 0 3 641 255 114 0 0 chr3L 7418078 7418122 -17125435 + (A)n Simple_repeat Simple_repeat 1 44 0 3 641 22 80 0 0 chr3L 7420288 7420338 -17123219 + AT_rich Low_complexity Low_complexity 1 50 0 3 641 180 0 0 0 chr3L 7425420 7425440 -17118117 + (TATG)n Simple_repeat Simple_repeat 1 20 0 3 641 194 62 31 0 chr3L 7426858 7426890 -17116667 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 641 219 183 32 48 chr3L 7426951 7427014 -17116543 + T-rich Low_complexity Low_complexity 3 64 0 3 641 204 182 0 0 chr3L 7430943 7430987 -17112570 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 641 405 123 0 0 chr3L 7431151 7431216 -17112341 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 641 29 28 0 0 chr3L 7431524 7431560 -17111997 + AT_rich Low_complexity Low_complexity 1 36 0 3 641 180 0 0 0 chr3L 7431560 7431580 -17111977 + (ACATG)n Simple_repeat Simple_repeat 1 20 0 3 641 529 240 127 105 chr3L 7432579 7432807 -17110750 - DNAREP1_DM LINE Penelope 0 594 362 3 641 469 214 49 61 chr3L 7432811 7432975 -17110582 - DNAREP1_DM LINE Penelope -430 164 3 3 641 27 49 0 0 chr3L 7434853 7434894 -17108663 + AT_rich Low_complexity Low_complexity 1 41 0 3 641 225 159 0 0 chr3L 7436829 7436873 -17106684 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 3 641 251 170 0 36 chr3L 7439795 7439850 -17103707 + T-rich Low_complexity Low_complexity 5 57 0 3 641 405 133 0 0 chr3L 7443014 7443089 -17100468 + (CAG)n Simple_repeat Simple_repeat 1 75 0 3 641 195 114 0 0 chr3L 7443419 7443454 -17100103 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 641 298 161 37 0 chr3L 7443544 7443625 -17099932 + ROO_I LTR Pao 649 732 -7524 3 641 25 0 0 0 chr3L 7443903 7443928 -17099629 + AT_rich Low_complexity Low_complexity 1 25 0 3 641 22 0 0 0 chr3L 7445251 7445273 -17098284 + AT_rich Low_complexity Low_complexity 1 22 0 3 641 206 200 67 0 chr3L 7447106 7447166 -17096391 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 3 641 336 64 0 0 chr3L 7447815 7447862 -17095695 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 641 255 79 0 0 chr3L 7453821 7453859 -17089698 + (GATTG)n Simple_repeat Simple_repeat 3 40 0 3 641 22 0 0 0 chr3L 7455175 7455197 -17088360 + AT_rich Low_complexity Low_complexity 1 22 0 3 641 21 0 0 0 chr3L 7457007 7457028 -17086529 + AT_rich Low_complexity Low_complexity 1 21 0 3 641 28 29 0 0 chr3L 7464100 7464135 -17079422 + AT_rich Low_complexity Low_complexity 1 35 0 3 641 183 42 0 0 chr3L 7464400 7464424 -17079133 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 3 641 35 0 0 0 chr3L 7467077 7467112 -17076445 + AT_rich Low_complexity Low_complexity 1 35 0 3 641 21 57 0 0 chr3L 7469369 7469404 -17074153 + AT_rich Low_complexity Low_complexity 1 35 0 3 641 202 194 0 0 chr3L 7470379 7470415 -17073142 + (TCG)n Simple_repeat Simple_repeat 2 37 0 3 642 29 0 0 0 chr3L 7471588 7471617 -17071940 + AT_rich Low_complexity Low_complexity 1 29 0 3 642 24 0 0 0 chr3L 7475721 7475745 -17067812 + AT_rich Low_complexity Low_complexity 1 24 0 3 642 23 0 0 0 chr3L 7477631 7477654 -17065903 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 43 20 0 0 chr3L 7477824 7477874 -17065683 + AT_rich Low_complexity Low_complexity 1 50 0 3 642 38 61 0 0 chr3L 7481051 7481117 -17062440 + AT_rich Low_complexity Low_complexity 1 66 0 3 642 23 101 0 0 chr3L 7482521 7482600 -17060957 + AT_rich Low_complexity Low_complexity 1 79 0 3 642 32 26 0 0 chr3L 7482866 7482905 -17060652 + AT_rich Low_complexity Low_complexity 1 39 0 3 642 205 261 0 0 chr3L 7483256 7483321 -17060236 + T-rich Low_complexity Low_complexity 1 65 0 3 642 43256 1 0 0 chr3L 7491925 7496618 -17046939 + FW_DM LINE Jockey 1 4692 0 3 642 21 57 0 0 chr3L 7496651 7496686 -17046871 + AT_rich Low_complexity Low_complexity 1 35 0 3 642 21 36 0 0 chr3L 7501066 7501094 -17042463 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 21 0 0 0 chr3L 7502871 7502892 -17040665 + AT_rich Low_complexity Low_complexity 1 21 0 3 642 32 81 0 0 chr3L 7503828 7503902 -17039655 + AT_rich Low_complexity Low_complexity 1 74 0 3 642 202 309 0 0 chr3L 7506302 7506383 -17037174 + (CTG)n Simple_repeat Simple_repeat 2 82 0 3 642 24 0 0 0 chr3L 7510396 7510420 -17033137 + AT_rich Low_complexity Low_complexity 1 24 0 3 642 419 69 18 81 chr3L 7511952 7512063 -17031494 + (CAG)n Simple_repeat Simple_repeat 1 104 0 3 642 187 31 0 59 chr3L 7512341 7512375 -17031182 + (CGAT)n Simple_repeat Simple_repeat 4 35 0 3 642 28 0 0 0 chr3L 7515184 7515212 -17028345 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 297 75 0 0 chr3L 7516388 7516428 -17027129 + (TCCA)n Simple_repeat Simple_repeat 3 42 0 3 642 225 174 0 0 chr3L 7520919 7520965 -17022592 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 642 218 224 0 17 chr3L 7522172 7522231 -17021326 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 642 21 36 0 0 chr3L 7523197 7523225 -17020332 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 22 0 0 0 chr3L 7528072 7528094 -17015463 + AT_rich Low_complexity Low_complexity 1 22 0 3 642 186 43 0 0 chr3L 7531170 7531193 -17012364 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 642 23 68 0 0 chr3L 7531346 7531390 -17012167 + AT_rich Low_complexity Low_complexity 1 44 0 3 642 23 0 0 0 chr3L 7533233 7533256 -17010301 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 243 0 0 0 chr3L 7538367 7538394 -17005163 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 642 21 36 0 0 chr3L 7542585 7542613 -17000944 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 27 0 0 0 chr3L 7548883 7548910 -16994647 + AT_rich Low_complexity Low_complexity 1 27 0 3 642 25 0 0 0 chr3L 7550729 7550754 -16992803 + AT_rich Low_complexity Low_complexity 1 25 0 3 642 23 0 0 0 chr3L 7550936 7550959 -16992598 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 24 0 0 0 chr3L 7551930 7551954 -16991603 + AT_rich Low_complexity Low_complexity 1 24 0 3 642 330 107 0 0 chr3L 7552766 7552822 -16990735 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 642 612 0 0 0 chr3L 7553782 7553850 -16989707 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 642 198 171 0 0 chr3L 7554542 7554583 -16988974 + (CAGA)n Simple_repeat Simple_repeat 1 41 0 3 642 195 42 0 0 chr3L 7557691 7557715 -16985842 + (CCA)n Simple_repeat Simple_repeat 2 25 0 3 642 23 33 0 0 chr3L 7562132 7562162 -16981395 + AT_rich Low_complexity Low_complexity 1 30 0 3 642 25 31 0 0 chr3L 7562340 7562372 -16981185 + AT_rich Low_complexity Low_complexity 1 32 0 3 642 260 102 0 20 chr3L 7563547 7563597 -16979960 + (CATCG)n Simple_repeat Simple_repeat 4 52 0 3 642 22 0 0 0 chr3L 7565211 7565233 -16978324 + AT_rich Low_complexity Low_complexity 1 22 0 3 642 192 97 0 0 chr3L 7567449 7567480 -16976077 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 642 201 39 0 0 chr3L 7567687 7567713 -16975844 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 3 642 21 36 0 0 chr3L 7568897 7568925 -16974632 + AT_rich Low_complexity Low_complexity 1 28 0 3 642 26 30 0 0 chr3L 7569151 7569184 -16974373 + AT_rich Low_complexity Low_complexity 1 33 0 3 642 27 29 0 0 chr3L 7569894 7569928 -16973629 + AT_rich Low_complexity Low_complexity 1 34 0 3 642 186 103 0 0 chr3L 7571717 7571746 -16971811 + (TTTTTG)n Simple_repeat Simple_repeat 4 32 0 3 642 195 100 0 0 chr3L 7574455 7574485 -16969072 + (CGAGT)n Simple_repeat Simple_repeat 3 32 0 3 642 186 143 0 0 chr3L 7575279 7575314 -16968243 + (T)n Simple_repeat Simple_repeat 1 35 0 3 642 21 0 0 0 chr3L 7584122 7584143 -16959414 + AT_rich Low_complexity Low_complexity 1 21 0 3 642 279 253 13 0 chr3L 7584824 7584899 -16958658 + (TTG)n Simple_repeat Simple_repeat 3 78 0 3 642 28 29 0 0 chr3L 7585305 7585340 -16958217 + AT_rich Low_complexity Low_complexity 1 35 0 3 642 34 65 0 0 chr3L 7585369 7585431 -16958126 + AT_rich Low_complexity Low_complexity 1 62 0 3 642 21 0 0 0 chr3L 7589956 7589977 -16953580 + AT_rich Low_complexity Low_complexity 1 21 0 3 642 215 61 0 29 chr3L 7590166 7590200 -16953357 + (TAA)n Simple_repeat Simple_repeat 2 34 0 3 642 22 0 0 0 chr3L 7591555 7591577 -16951980 + AT_rich Low_complexity Low_complexity 1 22 0 3 642 189 121 0 0 chr3L 7591781 7591814 -16951743 + (CGGA)n Simple_repeat Simple_repeat 1 33 0 3 642 180 0 0 0 chr3L 7592175 7592195 -16951362 + (A)n Simple_repeat Simple_repeat 1 20 0 3 642 22 0 0 0 chr3L 7595574 7595596 -16947961 + AT_rich Low_complexity Low_complexity 1 22 0 3 642 21 0 0 0 chr3L 7596636 7596657 -16946900 + AT_rich Low_complexity Low_complexity 1 21 0 3 642 25 51 0 0 chr3L 7599453 7599492 -16944065 + AT_rich Low_complexity Low_complexity 1 39 0 3 642 225 94 0 0 chr3L 7600644 7600676 -16942881 + (TA)n Simple_repeat Simple_repeat 1 32 0 3 642 31 44 0 0 chr3L 7601398 7601443 -16942114 + AT_rich Low_complexity Low_complexity 1 45 0 3 642 23 68 0 0 chr3L 7601516 7601560 -16941997 + AT_rich Low_complexity Low_complexity 1 44 0 3 642 207 69 0 0 chr3L 7601796 7601825 -16941732 + (GCTTG)n Simple_repeat Simple_repeat 5 33 0 3 643 225 220 0 48 chr3L 7603058 7603120 -16940437 + (CAG)n Simple_repeat Simple_repeat 3 61 0 3 643 21 0 0 0 chr3L 7604623 7604644 -16938913 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 282 182 0 0 chr3L 7606265 7606331 -16937226 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 643 35 54 0 0 chr3L 7612821 7612877 -16930680 + AT_rich Low_complexity Low_complexity 1 56 0 3 643 186 133 0 0 chr3L 7614760 7614790 -16928767 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 3 643 186 103 0 0 chr3L 7615231 7615260 -16928297 + (CAT)n Simple_repeat Simple_repeat 3 31 0 3 643 282 73 0 0 chr3L 7615643 7615684 -16927873 + (A)n Simple_repeat Simple_repeat 1 41 0 3 643 300 53 0 0 chr3L 7617765 7617803 -16925754 + (CAG)n Simple_repeat Simple_repeat 2 39 0 3 643 246 81 0 0 chr3L 7617976 7618013 -16925544 + (CAG)n Simple_repeat Simple_repeat 3 39 0 3 643 26 30 0 0 chr3L 7620253 7620286 -16923271 + AT_rich Low_complexity Low_complexity 1 33 0 3 643 21 89 0 0 chr3L 7620339 7620395 -16923162 + AT_rich Low_complexity Low_complexity 1 56 0 3 643 188 122 24 0 chr3L 7620885 7620926 -16922631 + (CATTT)n Simple_repeat Simple_repeat 5 46 0 3 643 22 0 0 0 chr3L 7621490 7621512 -16922045 + AT_rich Low_complexity Low_complexity 1 22 0 3 643 259 141 36 71 chr3L 7621651 7621735 -16921822 - ROO_I LTR Pao -7515 741 661 3 643 180 231 0 0 chr3L 7625695 7625747 -16917810 + (TTG)n Simple_repeat Simple_repeat 1 52 0 3 643 26 64 0 0 chr3L 7632246 7632293 -16911264 + AT_rich Low_complexity Low_complexity 1 47 0 3 643 29 28 0 0 chr3L 7635012 7635048 -16908509 + AT_rich Low_complexity Low_complexity 1 36 0 3 643 28 0 0 0 chr3L 7635587 7635615 -16907942 + AT_rich Low_complexity Low_complexity 1 28 0 3 643 26 50 0 0 chr3L 7636567 7636607 -16906950 + AT_rich Low_complexity Low_complexity 1 40 0 3 643 195 139 0 0 chr3L 7639240 7639276 -16904281 + (AAGTG)n Simple_repeat Simple_repeat 1 36 0 3 643 22 35 0 0 chr3L 7641134 7641163 -16902394 + AT_rich Low_complexity Low_complexity 1 29 0 3 643 233 163 0 20 chr3L 7641936 7641986 -16901571 + (CAT)n Simple_repeat Simple_repeat 3 51 0 3 643 189 254 0 0 chr3L 7643106 7643161 -16900396 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 643 200 191 15 31 chr3L 7643162 7643227 -16900330 + A-rich Low_complexity Low_complexity 4 67 0 3 643 25 65 0 0 chr3L 7644919 7644965 -16898592 + AT_rich Low_complexity Low_complexity 1 46 0 3 643 261 169 55 27 chr3L 7647584 7647657 -16895900 + ROO_I LTR Pao 664 738 -7518 3 643 31 33 0 47 chr3L 7647960 7648024 -16895533 + AT_rich Low_complexity Low_complexity 1 61 0 3 643 21 0 0 0 chr3L 7648474 7648495 -16895062 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 32 26 0 0 chr3L 7649115 7649154 -16894403 + AT_rich Low_complexity Low_complexity 1 39 0 3 643 210 286 0 0 chr3L 7649545 7649601 -16893956 + CT-rich Low_complexity Low_complexity 1 56 0 3 643 210 143 0 0 chr3L 7655942 7655977 -16887580 + (CACCAT)n Simple_repeat Simple_repeat 1 35 0 3 643 203 245 0 0 chr3L 7659377 7659426 -16884131 + (TGG)n Simple_repeat Simple_repeat 3 51 0 3 643 258 187 13 39 chr3L 7699936 7700014 -16843543 + (TTG)n Simple_repeat Simple_repeat 1 76 0 3 643 22 70 0 0 chr3L 7705301 7705344 -16838213 + AT_rich Low_complexity Low_complexity 1 43 0 3 643 243 233 0 0 chr3L 7706583 7706643 -16836914 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 643 31 58 0 0 chr3L 7707044 7707096 -16836461 + AT_rich Low_complexity Low_complexity 1 52 0 3 643 25 51 0 0 chr3L 7712116 7712155 -16831402 + AT_rich Low_complexity Low_complexity 1 39 0 3 643 21 0 0 0 chr3L 7720849 7720870 -16822687 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 200 114 0 28 chr3L 7721661 7721697 -16821860 + (TTG)n Simple_repeat Simple_repeat 1 35 0 3 643 21 0 0 0 chr3L 7726419 7726440 -16817117 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 26 0 0 0 chr3L 7727288 7727314 -16816243 + AT_rich Low_complexity Low_complexity 1 26 0 3 643 24 0 0 0 chr3L 7728539 7728563 -16814994 + AT_rich Low_complexity Low_complexity 1 24 0 3 643 22 0 0 0 chr3L 7728734 7728756 -16814801 + AT_rich Low_complexity Low_complexity 1 22 0 3 643 27 92 0 0 chr3L 7731908 7731984 -16811573 + AT_rich Low_complexity Low_complexity 1 76 0 3 644 25 0 0 0 chr3L 7734800 7734825 -16808732 + AT_rich Low_complexity Low_complexity 1 25 0 3 644 27 29 0 0 chr3L 7735663 7735697 -16807860 + AT_rich Low_complexity Low_complexity 1 34 0 3 644 29 47 0 0 chr3L 7737375 7737418 -16806139 + AT_rich Low_complexity Low_complexity 1 43 0 3 644 216 0 0 0 chr3L 7740352 7740376 -16803181 + (CAT)n Simple_repeat Simple_repeat 1 24 0 3 644 210 300 0 0 chr3L 7740498 7740578 -16802979 + A-rich Low_complexity Low_complexity 1 80 0 3 644 43 35 0 0 chr3L 7745957 7746014 -16797543 + AT_rich Low_complexity Low_complexity 1 57 0 3 644 30 59 0 0 chr3L 7746112 7746163 -16797394 + AT_rich Low_complexity Low_complexity 1 51 0 3 644 22 35 0 0 chr3L 7747261 7747290 -16796267 + AT_rich Low_complexity Low_complexity 1 29 0 3 644 26 30 0 0 chr3L 7748234 7748267 -16795290 + AT_rich Low_complexity Low_complexity 1 33 0 3 644 284 48 24 0 chr3L 7749445 7749487 -16794070 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 644 25 51 0 0 chr3L 7750317 7750356 -16793201 + AT_rich Low_complexity Low_complexity 1 39 0 3 644 23 0 0 0 chr3L 7752195 7752218 -16791339 + AT_rich Low_complexity Low_complexity 1 23 0 3 644 29 28 0 0 chr3L 7753886 7753922 -16789635 + AT_rich Low_complexity Low_complexity 1 36 0 3 644 233 145 0 52 chr3L 7757471 7757529 -16786028 + (CTG)n Simple_repeat Simple_repeat 3 57 0 3 644 440 164 0 0 chr3L 7757892 7757996 -16785561 - ROO_I LTR Pao -7512 744 641 3 644 208 310 0 0 chr3L 7757997 7758113 -16785444 + (CTG)n Simple_repeat Simple_repeat 1 116 0 3 644 310 174 35 0 chr3L 7758669 7758755 -16784802 - ROO_I LTR Pao -7527 729 641 3 644 21 0 0 0 chr3L 7762370 7762391 -16781166 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 282 73 0 0 chr3L 7765555 7765596 -16777961 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 644 29 28 0 0 chr3L 7766950 7766986 -16776571 + AT_rich Low_complexity Low_complexity 1 36 0 3 644 38 0 0 0 chr3L 7767170 7767208 -16776349 + AT_rich Low_complexity Low_complexity 1 38 0 3 644 23 33 0 0 chr3L 7767307 7767337 -16776220 + AT_rich Low_complexity Low_complexity 1 30 0 3 644 21 0 0 0 chr3L 7767533 7767554 -16776003 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 21 82 0 0 chr3L 7769282 7769331 -16774226 + AT_rich Low_complexity Low_complexity 1 49 0 3 644 22 35 0 0 chr3L 7770030 7770059 -16773498 + AT_rich Low_complexity Low_complexity 1 29 0 3 644 204 125 0 0 chr3L 7773357 7773389 -16770168 + (TGG)n Simple_repeat Simple_repeat 1 32 0 3 644 22 0 0 0 chr3L 7774321 7774343 -16769214 + AT_rich Low_complexity Low_complexity 1 22 0 3 644 32 0 0 0 chr3L 7776398 7776430 -16767127 + GC_rich Low_complexity Low_complexity 1 32 0 3 644 195 42 0 0 chr3L 7777223 7777247 -16766310 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 644 23 54 0 0 chr3L 7778326 7778363 -16765194 + AT_rich Low_complexity Low_complexity 1 37 0 3 644 22 0 0 0 chr3L 7779673 7779695 -16763862 + AT_rich Low_complexity Low_complexity 1 22 0 3 644 27 0 0 0 chr3L 7779966 7779993 -16763564 + AT_rich Low_complexity Low_complexity 1 27 0 3 644 28 79 0 0 chr3L 7780616 7780679 -16762878 + AT_rich Low_complexity Low_complexity 1 63 0 3 644 189 0 0 0 chr3L 7780859 7780880 -16762677 + (A)n Simple_repeat Simple_repeat 1 21 0 3 644 214 119 48 0 chr3L 7783192 7783234 -16760323 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 644 333 159 0 0 chr3L 7783373 7783436 -16760121 + (TTG)n Simple_repeat Simple_repeat 1 63 0 3 644 34 0 0 0 chr3L 7784456 7784490 -16759067 + AT_rich Low_complexity Low_complexity 1 34 0 3 644 223 186 0 0 chr3L 7784844 7784887 -16758670 + T-rich Low_complexity Low_complexity 1 43 0 3 644 3523 5 7 7 chr3L 7786866 7787280 -16756277 - DM297_LTR LTR Gypsy 0 414 1 3 644 53309 6 0 0 chr3L 7787280 7793447 -16750110 - DM297_I LTR Gypsy 0 6167 1 3 644 3523 5 7 7 chr3L 7793447 7793861 -16749696 - DM297_LTR LTR Gypsy 0 414 1 3 644 22 0 0 0 chr3L 7795194 7795216 -16748341 + AT_rich Low_complexity Low_complexity 1 22 0 3 644 25 0 0 0 chr3L 7796291 7796316 -16747241 + AT_rich Low_complexity Low_complexity 1 25 0 3 644 21 36 0 0 chr3L 7797679 7797707 -16745850 + AT_rich Low_complexity Low_complexity 1 28 0 3 644 219 36 0 0 chr3L 7798047 7798075 -16745482 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 644 24 0 0 0 chr3L 7802359 7802383 -16741174 + AT_rich Low_complexity Low_complexity 1 24 0 3 644 21 0 0 0 chr3L 7802582 7802603 -16740954 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 206 273 10 29 chr3L 7802767 7802869 -16740688 + T-rich Low_complexity Low_complexity 3 102 0 3 644 24 0 0 0 chr3L 7803068 7803092 -16740465 + AT_rich Low_complexity Low_complexity 1 24 0 3 644 243 0 0 0 chr3L 7803879 7803906 -16739651 + (CTG)n Simple_repeat Simple_repeat 3 29 0 3 644 25 65 0 0 chr3L 7804137 7804183 -16739374 + AT_rich Low_complexity Low_complexity 1 46 0 3 644 217 213 33 0 chr3L 7805857 7805918 -16737639 + T-rich Low_complexity Low_complexity 3 65 0 3 644 201 159 48 0 chr3L 7805989 7806052 -16737505 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 644 26 0 0 0 chr3L 7806450 7806476 -16737081 + AT_rich Low_complexity Low_complexity 1 26 0 3 644 180 125 0 0 chr3L 7806864 7806896 -16736661 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 3 644 28 48 0 0 chr3L 7807072 7807114 -16736443 + AT_rich Low_complexity Low_complexity 1 42 0 3 644 247 169 17 17 chr3L 7809318 7809378 -16734179 + (TTA)n Simple_repeat Simple_repeat 2 61 0 3 644 217 193 11 46 chr3L 7811559 7811646 -16731911 + (CAAA)n Simple_repeat Simple_repeat 4 87 0 3 644 231 152 0 0 chr3L 7812021 7812067 -16731490 + T-rich Low_complexity Low_complexity 1 46 0 3 644 234 263 13 0 chr3L 7813191 7813267 -16730290 + A-rich Low_complexity Low_complexity 6 82 0 3 644 24 0 0 0 chr3L 7814623 7814647 -16728910 + AT_rich Low_complexity Low_complexity 1 24 0 3 644 228 232 0 0 chr3L 7814833 7814889 -16728668 + CT-rich Low_complexity Low_complexity 2 57 0 3 644 281 160 0 39 chr3L 7814945 7815023 -16728534 + (TTG)n Simple_repeat Simple_repeat 1 75 0 3 644 219 180 20 0 chr3L 7815091 7815141 -16728416 + (TTG)n Simple_repeat Simple_repeat 1 51 0 3 644 24 53 0 0 chr3L 7818574 7818612 -16724945 + AT_rich Low_complexity Low_complexity 1 38 0 3 644 426 167 0 0 chr3L 7818766 7818850 -16724707 + (TTG)n Simple_repeat Simple_repeat 1 84 0 3 644 306 125 0 0 chr3L 7818979 7819027 -16724530 + (TTG)n Simple_repeat Simple_repeat 1 48 0 3 644 234 257 42 42 chr3L 7819060 7819178 -16724379 - ROO_I LTR Pao -7500 756 639 3 644 273 194 0 104 chr3L 7819529 7819644 -16723913 - ROO_I LTR Pao -7513 743 641 3 644 224 311 20 26 chr3L 7819944 7820096 -16723461 + T-rich Low_complexity Low_complexity 5 155 0 3 644 21 0 0 0 chr3L 7820633 7820654 -16722903 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 233 277 0 0 chr3L 7823597 7823662 -16719895 - ROO_I LTR Pao -7539 717 653 3 644 181 175 0 45 chr3L 7823755 7823821 -16719736 + (CAG)n Simple_repeat Simple_repeat 3 65 0 3 644 256 200 10 10 chr3L 7824033 7824134 -16719423 - ROO_I LTR Pao -7517 739 639 3 644 285 140 0 0 chr3L 7824166 7824223 -16719334 + (CTG)n Simple_repeat Simple_repeat 3 59 0 3 644 246 136 0 0 chr3L 7824262 7824306 -16719251 + (CTG)n Simple_repeat Simple_repeat 1 44 0 3 644 269 257 19 29 chr3L 7824471 7824575 -16718982 - ROO_I LTR Pao -7513 743 641 3 644 22 70 0 0 chr3L 7825542 7825585 -16717972 + AT_rich Low_complexity Low_complexity 1 43 0 3 644 280 203 16 0 chr3L 7825842 7825906 -16717651 + CT-rich Low_complexity Low_complexity 2 66 0 3 644 230 273 0 0 chr3L 7826232 7826287 -16717270 + (CCG)n Simple_repeat Simple_repeat 3 57 0 3 644 21 0 0 0 chr3L 7826664 7826685 -16716872 + AT_rich Low_complexity Low_complexity 1 21 0 3 644 21 36 0 0 chr3L 7826738 7826766 -16716791 + AT_rich Low_complexity Low_complexity 1 28 0 3 644 222 218 11 33 chr3L 7827681 7827771 -16715786 + (TAAA)n Simple_repeat Simple_repeat 4 91 0 3 644 28 29 0 0 chr3L 7828805 7828840 -16714717 + AT_rich Low_complexity Low_complexity 1 35 0 3 644 24 67 0 0 chr3L 7830515 7830560 -16712997 + AT_rich Low_complexity Low_complexity 1 45 0 3 644 23 0 0 0 chr3L 7831654 7831677 -16711880 + AT_rich Low_complexity Low_complexity 1 23 0 3 644 25 51 0 0 chr3L 7831992 7832031 -16711526 + AT_rich Low_complexity Low_complexity 1 39 0 3 644 210 162 0 0 chr3L 7833297 7833334 -16710223 + T-rich Low_complexity Low_complexity 1 37 0 3 644 28 29 0 0 chr3L 7836038 7836073 -16707484 + AT_rich Low_complexity Low_complexity 1 35 0 3 644 209 30 61 0 chr3L 7837517 7837550 -16706007 + (CATA)n Simple_repeat Simple_repeat 2 36 0 3 644 291 28 0 0 chr3L 7840159 7840195 -16703362 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 644 216 0 0 0 chr3L 7841741 7841765 -16701792 + (TTG)n Simple_repeat Simple_repeat 3 26 0 3 644 48 103 0 0 chr3L 7845172 7845346 -16698211 + AT_rich Low_complexity Low_complexity 1 174 0 3 644 244 250 11 11 chr3L 7846736 7846825 -16696732 + (TA)n Simple_repeat Simple_repeat 2 90 0 3 644 222 250 57 0 chr3L 7847114 7847202 -16696355 + T-rich Low_complexity Low_complexity 4 96 0 3 644 23 0 0 0 chr3L 7847744 7847767 -16695790 + AT_rich Low_complexity Low_complexity 1 23 0 3 644 207 0 0 0 chr3L 7847786 7847809 -16695748 + (T)n Simple_repeat Simple_repeat 1 23 0 3 644 183 80 0 0 chr3L 7848172 7848197 -16695360 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 644 21 71 0 0 chr3L 7849043 7849085 -16694472 + AT_rich Low_complexity Low_complexity 1 42 0 3 644 183 170 0 0 chr3L 7849719 7849766 -16693791 + T-rich Low_complexity Low_complexity 1 47 0 3 644 22 35 0 0 chr3L 7850556 7850585 -16692972 + AT_rich Low_complexity Low_complexity 1 29 0 3 644 225 132 0 0 chr3L 7851034 7851072 -16692485 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 3 644 228 170 0 0 chr3L 7853259 7853312 -16690245 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 644 25 65 0 0 chr3L 7855093 7855139 -16688418 + AT_rich Low_complexity Low_complexity 1 46 0 3 644 189 0 0 0 chr3L 7855228 7855249 -16688308 + (T)n Simple_repeat Simple_repeat 1 21 0 3 644 215 103 51 0 chr3L 7855358 7855397 -16688160 + A-rich Low_complexity Low_complexity 1 41 0 3 644 25 51 0 0 chr3L 7856016 7856055 -16687502 + AT_rich Low_complexity Low_complexity 1 39 0 3 644 237 224 0 0 chr3L 7856556 7856605 -16686952 + (TTG)n Simple_repeat Simple_repeat 1 49 0 3 644 21 36 0 0 chr3L 7857001 7857029 -16686528 + AT_rich Low_complexity Low_complexity 1 28 0 3 644 24 0 0 0 chr3L 7859720 7859744 -16683813 + AT_rich Low_complexity Low_complexity 1 24 0 3 644 42 92 0 0 chr3L 7860922 7861041 -16682516 + AT_rich Low_complexity Low_complexity 1 119 0 3 644 21 36 0 0 chr3L 7861474 7861502 -16682055 + AT_rich Low_complexity Low_complexity 1 28 0 3 644 432 0 0 0 chr3L 7862795 7862843 -16680714 + (CAA)n Simple_repeat Simple_repeat 1 48 0 3 644 216 97 0 0 chr3L 7863704 7863735 -16679822 + (TTG)n Simple_repeat Simple_repeat 1 31 0 3 644 181 107 34 51 chr3L 7864178 7864237 -16679320 + (TAAA)n Simple_repeat Simple_repeat 4 61 0 3 645 255 61 0 0 chr3L 7865322 7865355 -16678202 + (CTG)n Simple_repeat Simple_repeat 2 34 0 3 645 22 0 0 0 chr3L 7867584 7867606 -16675951 + AT_rich Low_complexity Low_complexity 1 22 0 3 645 188 200 0 16 chr3L 7867762 7867823 -16675734 + (ACTG)n Simple_repeat Simple_repeat 3 62 0 3 645 205 196 45 0 chr3L 7868793 7868862 -16674695 + A-rich Low_complexity Low_complexity 1 72 0 3 645 207 162 0 0 chr3L 7870952 7870989 -16672568 + (CAG)n Simple_repeat Simple_repeat 2 38 0 3 645 27 29 0 0 chr3L 7872167 7872201 -16671356 + AT_rich Low_complexity Low_complexity 1 34 0 3 645 252 0 0 0 chr3L 7872331 7872359 -16671198 + (T)n Simple_repeat Simple_repeat 1 28 0 3 645 246 246 0 0 chr3L 7872972 7873033 -16670524 + A-rich Low_complexity Low_complexity 1 61 0 3 645 189 147 0 0 chr3L 7874493 7874527 -16669030 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 3 645 207 0 0 0 chr3L 7874810 7874833 -16668724 + (T)n Simple_repeat Simple_repeat 1 23 0 3 645 26 0 0 0 chr3L 7875126 7875152 -16668405 + AT_rich Low_complexity Low_complexity 1 26 0 3 645 34 42 0 0 chr3L 7875728 7875776 -16667781 + AT_rich Low_complexity Low_complexity 1 48 0 3 645 198 0 0 0 chr3L 7877052 7877074 -16666483 + (A)n Simple_repeat Simple_repeat 1 22 0 3 645 3592 2 0 2 chr3L 7879668 7880071 -16663486 + STALKER4_LTR LTR Gypsy 1 402 0 3 645 306 105 0 50 chr3L 7880075 7880135 -16663422 + Stalker2_I LTR Gypsy 1 57 -7345 3 645 286 55 309 0 chr3L 7880303 7880358 -16663199 + Stalker2_I LTR Gypsy 242 313 -7089 3 645 11793 1 1 0 chr3L 7880359 7881722 -16661835 + STALKER4_I LTR Gypsy 5167 6530 0 3 645 3592 2 0 2 chr3L 7881722 7882125 -16661432 + STALKER4_LTR LTR Gypsy 1 402 0 3 645 326 209 0 0 chr3L 7883213 7883318 -16660239 + ROO_I LTR Pao 644 748 -7508 3 645 21 36 0 0 chr3L 7883724 7883752 -16659805 + AT_rich Low_complexity Low_complexity 1 28 0 3 645 198 0 0 0 chr3L 7885073 7885095 -16658462 + (ATTG)n Simple_repeat Simple_repeat 4 25 0 3 645 189 0 0 0 chr3L 7885340 7885361 -16658196 + (CAG)n Simple_repeat Simple_repeat 1 21 0 3 645 28 29 0 0 chr3L 7887878 7887913 -16655644 + AT_rich Low_complexity Low_complexity 1 35 0 3 645 200 125 25 0 chr3L 7892521 7892561 -16650996 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 645 210 71 0 0 chr3L 7893294 7893322 -16650235 + (ATG)n Simple_repeat Simple_repeat 1 28 0 3 645 22 35 0 0 chr3L 7902984 7903013 -16640544 + AT_rich Low_complexity Low_complexity 1 29 0 3 645 24 32 0 0 chr3L 7903887 7903918 -16639639 + AT_rich Low_complexity Low_complexity 1 31 0 3 645 25 0 0 0 chr3L 7904770 7904795 -16638762 + AT_rich Low_complexity Low_complexity 1 25 0 3 645 4022 0 0 0 chr3L 7909983 7910411 -16633146 + ROO_LTR LTR Pao 1 428 0 3 645 75055 1 2 2 chr3L 7910411 7918668 -16624889 + ROO_I LTR Pao 1 8256 0 3 645 4022 0 0 0 chr3L 7918668 7919096 -16624461 + ROO_LTR LTR Pao 1 428 0 3 645 22 56 0 0 chr3L 7919209 7919245 -16624312 + AT_rich Low_complexity Low_complexity 1 36 0 3 645 21 0 0 0 chr3L 7919269 7919290 -16624267 + AT_rich Low_complexity Low_complexity 1 21 0 3 645 252 59 0 0 chr3L 7919482 7919516 -16624041 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 645 47 44 0 0 chr3L 7920191 7920259 -16623298 + AT_rich Low_complexity Low_complexity 1 68 0 3 645 183 42 0 0 chr3L 7920722 7920746 -16622811 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 3 645 24 32 0 0 chr3L 7929312 7929343 -16614214 + AT_rich Low_complexity Low_complexity 1 31 0 3 645 21 0 0 0 chr3L 7935659 7935680 -16607877 + AT_rich Low_complexity Low_complexity 1 21 0 3 645 210 71 0 0 chr3L 7936614 7936642 -16606915 + (CACTC)n Simple_repeat Simple_repeat 5 32 0 3 645 22 35 0 0 chr3L 7938809 7938838 -16604719 + AT_rich Low_complexity Low_complexity 1 29 0 3 645 34 24 0 0 chr3L 7939425 7939466 -16604091 + AT_rich Low_complexity Low_complexity 1 41 0 3 645 195 42 0 0 chr3L 7943998 7944022 -16599535 + (CAG)n Simple_repeat Simple_repeat 1 24 0 3 645 35 0 0 0 chr3L 7945504 7945539 -16598018 + AT_rich Low_complexity Low_complexity 1 35 0 3 645 230 246 0 17 chr3L 7945878 7945936 -16597621 + (TTG)n Simple_repeat Simple_repeat 3 59 0 3 645 26 88 0 0 chr3L 7946270 7946338 -16597219 + AT_rich Low_complexity Low_complexity 1 68 0 3 645 24 32 0 0 chr3L 7948941 7948972 -16594585 + AT_rich Low_complexity Low_complexity 1 31 0 3 645 186 103 0 0 chr3L 7949813 7949842 -16593715 + (TTG)n Simple_repeat Simple_repeat 1 29 0 3 645 26 30 0 0 chr3L 7950234 7950267 -16593290 + AT_rich Low_complexity Low_complexity 1 33 0 3 645 21 71 0 0 chr3L 7950277 7950319 -16593238 + AT_rich Low_complexity Low_complexity 1 42 0 3 645 35 54 0 0 chr3L 7953993 7954049 -16589508 + AT_rich Low_complexity Low_complexity 1 56 0 3 645 180 0 0 0 chr3L 7954375 7954395 -16589162 + (ATG)n Simple_repeat Simple_repeat 3 22 0 3 645 23 0 0 0 chr3L 7955122 7955145 -16588412 + AT_rich Low_complexity Low_complexity 1 23 0 3 645 53 57 0 0 chr3L 7955194 7955282 -16588275 + AT_rich Low_complexity Low_complexity 1 88 0 3 645 25 0 0 0 chr3L 7955321 7955346 -16588211 + AT_rich Low_complexity Low_complexity 1 25 0 3 645 25 0 0 0 chr3L 7961999 7962024 -16581533 + AT_rich Low_complexity Low_complexity 1 25 0 3 645 41 21 0 0 chr3L 7968128 7968176 -16575381 + AT_rich Low_complexity Low_complexity 1 48 0 3 645 42 36 0 0 chr3L 7969393 7969449 -16574108 + AT_rich Low_complexity Low_complexity 1 56 0 3 645 189 74 0 0 chr3L 7970872 7970899 -16572658 + (A)n Simple_repeat Simple_repeat 1 27 0 3 645 207 259 0 0 chr3L 7973697 7973751 -16569806 + (CCA)n Simple_repeat Simple_repeat 3 56 0 3 645 186 43 0 0 chr3L 7974815 7974838 -16568719 + (GCTG)n Simple_repeat Simple_repeat 2 24 0 3 645 220 305 0 12 chr3L 7976723 7976806 -16566751 + (TATG)n Simple_repeat Simple_repeat 1 82 0 3 645 241 210 32 0 chr3L 7977078 7977140 -16566417 + (ACTCG)n Simple_repeat Simple_repeat 1 64 0 3 645 261 57 0 0 chr3L 7978115 7978150 -16565407 + (CTTG)n Simple_repeat Simple_repeat 1 35 0 3 645 219 139 0 0 chr3L 7978354 7978390 -16565167 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 645 9625 22 2 28 chr3L 7978522 7979848 -16563709 - FB4_DM DNA Tc1 0 4089 2798 3 645 4786 31 4 51 chr3L 7980084 7980788 -16562769 + FB4_DM DNA Tc1 3419 4089 0 3 645 261 302 12 0 chr3L 7983272 7983358 -16560199 + (CAG)n Simple_repeat Simple_repeat 3 89 0 3 645 192 200 0 0 chr3L 7984357 7984402 -16559155 + (CACCAT)n Simple_repeat Simple_repeat 4 48 0 3 645 49 0 0 0 chr3L 7985218 7985267 -16558290 + AT_rich Low_complexity Low_complexity 1 49 0 3 645 25 0 0 0 chr3L 7986539 7986564 -16556993 + AT_rich Low_complexity Low_complexity 1 25 0 3 645 351 136 0 0 chr3L 7988379 7988438 -16555119 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 645 24 67 0 0 chr3L 7990351 7990396 -16553161 + AT_rich Low_complexity Low_complexity 1 45 0 3 645 22 0 0 0 chr3L 7993447 7993469 -16550088 + AT_rich Low_complexity Low_complexity 1 22 0 3 645 219 88 0 0 chr3L 7994678 7994712 -16548845 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 646 300 120 0 0 chr3L 7995713 7995763 -16547794 + (CAGT)n Simple_repeat Simple_repeat 4 53 0 3 646 21 0 0 0 chr3L 7998029 7998050 -16545507 + AT_rich Low_complexity Low_complexity 1 21 0 3 646 192 40 0 0 chr3L 7999303 7999328 -16544229 + (T)n Simple_repeat Simple_repeat 1 25 0 3 646 21 0 0 0 chr3L 8000794 8000815 -16542742 + AT_rich Low_complexity Low_complexity 1 21 0 3 646 21 36 0 0 chr3L 8001359 8001387 -16542170 + AT_rich Low_complexity Low_complexity 1 28 0 3 646 24 0 0 0 chr3L 8002355 8002379 -16541178 + AT_rich Low_complexity Low_complexity 1 24 0 3 646 303 154 0 0 chr3L 8007089 8007154 -16536403 + A-rich Low_complexity Low_complexity 1 65 0 3 646 21 36 0 0 chr3L 8010631 8010659 -16532898 + AT_rich Low_complexity Low_complexity 1 28 0 3 646 14661 148 46 107 chr3L 8012858 8017209 -16526348 - FB4_DM DNA Tc1 0 4089 1 3 646 22 56 0 0 chr3L 8018032 8018068 -16525489 + AT_rich Low_complexity Low_complexity 1 36 0 3 646 225 0 0 0 chr3L 8020534 8020559 -16522998 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 646 24 67 0 0 chr3L 8020968 8021013 -16522544 + AT_rich Low_complexity Low_complexity 1 45 0 3 646 221 340 0 0 chr3L 8021246 8021346 -16522211 + T-rich Low_complexity Low_complexity 1 100 0 3 646 261 151 0 0 chr3L 8024757 8024810 -16518747 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 646 282 56 0 0 chr3L 8026833 8026869 -16516688 + (AAATG)n Simple_repeat Simple_repeat 4 39 0 3 646 243 103 0 0 chr3L 8028075 8028114 -16515443 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 3 646 288 0 0 0 chr3L 8028285 8028317 -16515240 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 646 216 0 0 0 chr3L 8029645 8029669 -16513888 + (CGA)n Simple_repeat Simple_repeat 2 25 0 3 646 185 0 40 0 chr3L 8030524 8030549 -16513008 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 646 218 258 0 0 chr3L 8031705 8031767 -16511790 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 646 24 0 0 0 chr3L 8033163 8033187 -16510370 + AT_rich Low_complexity Low_complexity 1 24 0 3 646 230 116 23 0 chr3L 8033971 8034014 -16509543 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 646 321 89 0 0 chr3L 8034693 8034738 -16508819 + (CAA)n Simple_repeat Simple_repeat 3 47 0 3 646 209 217 0 0 chr3L 8037222 8037268 -16506289 + A-rich Low_complexity Low_complexity 1 46 0 3 646 27 49 0 0 chr3L 8038076 8038117 -16505440 + AT_rich Low_complexity Low_complexity 1 41 0 3 646 216 97 0 0 chr3L 8041188 8041219 -16502338 + (CTA)n Simple_repeat Simple_repeat 3 33 0 3 646 200 59 0 29 chr3L 8042077 8042112 -16501445 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 646 25 51 0 0 chr3L 8043707 8043746 -16499811 + AT_rich Low_complexity Low_complexity 1 39 0 3 646 32 26 0 0 chr3L 8044104 8044143 -16499414 + AT_rich Low_complexity Low_complexity 1 39 0 3 646 239 224 0 0 chr3L 8050669 8050718 -16492839 + GA-rich Low_complexity Low_complexity 1 49 0 3 646 24 32 0 0 chr3L 8055490 8055521 -16488036 + AT_rich Low_complexity Low_complexity 1 31 0 3 646 275 26 51 0 chr3L 8055978 8056017 -16487540 + (TATATG)n Simple_repeat Simple_repeat 4 44 0 3 646 23 33 0 0 chr3L 8056246 8056276 -16487281 + AT_rich Low_complexity Low_complexity 1 30 0 3 646 210 250 0 0 chr3L 8057280 8057324 -16486233 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 646 28 48 0 0 chr3L 8057841 8057883 -16485674 + AT_rich Low_complexity Low_complexity 1 42 0 3 646 218 167 18 18 chr3L 8059012 8059067 -16484490 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 3 646 23 101 0 0 chr3L 8062428 8062507 -16481050 + AT_rich Low_complexity Low_complexity 1 79 0 3 646 189 0 0 0 chr3L 8063746 8063767 -16479790 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 3 646 200 180 0 39 chr3L 8070719 8070771 -16472786 + A-rich Low_complexity Low_complexity 4 53 0 3 646 24 67 0 0 chr3L 8071800 8071845 -16471712 + AT_rich Low_complexity Low_complexity 1 45 0 3 646 204 179 0 0 chr3L 8074079 8074118 -16469439 + (CGGA)n Simple_repeat Simple_repeat 3 41 0 3 646 23 33 0 0 chr3L 8075431 8075461 -16468096 + AT_rich Low_complexity Low_complexity 1 30 0 3 646 34 24 0 0 chr3L 8076411 8076452 -16467105 + AT_rich Low_complexity Low_complexity 1 41 0 3 646 28 48 0 0 chr3L 8085143 8085185 -16458372 + AT_rich Low_complexity Low_complexity 1 42 0 3 646 23 0 0 0 chr3L 8088681 8088704 -16454853 + AT_rich Low_complexity Low_complexity 1 23 0 3 646 32 0 0 0 chr3L 8089316 8089348 -16454209 + AT_rich Low_complexity Low_complexity 1 32 0 3 646 23 68 0 0 chr3L 8090872 8090916 -16452641 + AT_rich Low_complexity Low_complexity 1 44 0 3 646 198 0 0 0 chr3L 8095484 8095506 -16448051 + (CCA)n Simple_repeat Simple_repeat 3 24 0 3 646 265 233 9 28 chr3L 8095506 8095612 -16447945 + (CAA)n Simple_repeat Simple_repeat 2 105 0 3 646 21 36 0 0 chr3L 8100791 8100819 -16442738 + AT_rich Low_complexity Low_complexity 1 28 0 3 646 23 0 0 0 chr3L 8101051 8101074 -16442483 + AT_rich Low_complexity Low_complexity 1 23 0 3 646 201 213 0 21 chr3L 8109898 8109946 -16433611 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 646 206 121 0 0 chr3L 8112969 8113002 -16430555 + (TAA)n Simple_repeat Simple_repeat 2 34 0 3 646 204 97 0 0 chr3L 8113532 8113563 -16429994 + (GGA)n Simple_repeat Simple_repeat 3 33 0 3 646 207 0 0 0 chr3L 8114439 8114462 -16429095 + (CGAAA)n Simple_repeat Simple_repeat 3 25 0 3 646 27 29 0 0 chr3L 8114639 8114673 -16428884 + AT_rich Low_complexity Low_complexity 1 34 0 3 646 26 0 0 0 chr3L 8114761 8114787 -16428770 + AT_rich Low_complexity Low_complexity 1 26 0 3 646 31 68 0 0 chr3L 8118286 8118345 -16425212 + AT_rich Low_complexity Low_complexity 1 59 0 3 646 23 0 0 0 chr3L 8120989 8121012 -16422545 + AT_rich Low_complexity Low_complexity 1 23 0 3 647 22 99 0 0 chr3L 8137914 8137985 -16405572 + AT_rich Low_complexity Low_complexity 1 71 0 3 647 21 0 0 0 chr3L 8147229 8147250 -16396307 + AT_rich Low_complexity Low_complexity 1 21 0 3 647 206 163 23 0 chr3L 8147835 8147878 -16395679 + T-rich Low_complexity Low_complexity 5 48 0 3 647 194 174 0 21 chr3L 8151144 8151191 -16392366 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 647 26 0 0 0 chr3L 8152180 8152206 -16391351 + AT_rich Low_complexity Low_complexity 1 26 0 3 647 21 0 0 0 chr3L 8152785 8152806 -16390751 + AT_rich Low_complexity Low_complexity 1 21 0 3 647 33 66 0 0 chr3L 8153065 8153126 -16390431 + AT_rich Low_complexity Low_complexity 1 61 0 3 647 231 189 0 0 chr3L 8153942 8153995 -16389562 + (CTG)n Simple_repeat Simple_repeat 1 53 0 3 647 252 152 68 110 chr3L 8154078 8154196 -16389361 - ROO_I LTR Pao -7524 732 620 3 647 198 233 0 0 chr3L 8156856 8156916 -16386641 + (CTG)n Simple_repeat Simple_repeat 3 62 0 3 647 202 151 39 64 chr3L 8157395 8157473 -16386084 + (CTG)n Simple_repeat Simple_repeat 2 77 0 3 647 22 56 0 0 chr3L 8158040 8158076 -16385481 + AT_rich Low_complexity Low_complexity 1 36 0 3 647 33 25 0 0 chr3L 8159184 8159224 -16384333 + AT_rich Low_complexity Low_complexity 1 40 0 3 647 29 28 0 0 chr3L 8183953 8183989 -16359568 + AT_rich Low_complexity Low_complexity 1 36 0 3 647 24 0 0 0 chr3L 8184216 8184240 -16359317 + AT_rich Low_complexity Low_complexity 1 24 0 3 647 50 0 0 0 chr3L 8191135 8191185 -16352372 + AT_rich Low_complexity Low_complexity 1 50 0 3 647 27 0 0 0 chr3L 8194210 8194237 -16349320 + AT_rich Low_complexity Low_complexity 1 27 0 3 647 24 32 0 0 chr3L 8195453 8195484 -16348073 + AT_rich Low_complexity Low_complexity 1 31 0 3 647 256 339 0 0 chr3L 8196199 8196311 -16347246 + (CCG)n Simple_repeat Simple_repeat 2 113 0 3 647 204 125 0 0 chr3L 8198185 8198217 -16345340 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 647 27 29 0 0 chr3L 8198804 8198838 -16344719 + AT_rich Low_complexity Low_complexity 1 34 0 3 647 35 41 0 0 chr3L 8200123 8200172 -16343385 + AT_rich Low_complexity Low_complexity 1 49 0 3 647 26 0 0 0 chr3L 8202352 8202378 -16341179 + AT_rich Low_complexity Low_complexity 1 26 0 3 647 198 0 0 0 chr3L 8208559 8208581 -16334976 + (CAGC)n Simple_repeat Simple_repeat 2 23 0 3 647 26 0 0 0 chr3L 8210789 8210815 -16332742 + AT_rich Low_complexity Low_complexity 1 26 0 3 647 334 333 0 0 chr3L 8211559 8211697 -16331860 + (CGG)n Simple_repeat Simple_repeat 2 139 0 3 647 195 170 0 0 chr3L 8212219 8212266 -16331291 + (CAATC)n Simple_repeat Simple_repeat 5 51 0 3 647 38 61 0 0 chr3L 8213291 8213357 -16330200 + AT_rich Low_complexity Low_complexity 1 66 0 3 647 24 67 0 0 chr3L 8214316 8214361 -16329196 + AT_rich Low_complexity Low_complexity 1 45 0 3 647 206 176 0 56 chr3L 8215041 8215095 -16328462 + A-rich Low_complexity Low_complexity 6 56 0 3 647 183 80 0 0 chr3L 8216754 8216779 -16326778 + (CAGTT)n Simple_repeat Simple_repeat 1 25 0 3 647 23 54 0 0 chr3L 8217890 8217927 -16325630 + AT_rich Low_complexity Low_complexity 1 37 0 3 647 49 66 0 0 chr3L 8219760 8219851 -16323706 + AT_rich Low_complexity Low_complexity 1 91 0 3 647 28 29 0 0 chr3L 8219907 8219942 -16323615 + AT_rich Low_complexity Low_complexity 1 35 0 3 647 198 118 0 0 chr3L 8220459 8220493 -16323064 + (A)n Simple_repeat Simple_repeat 1 34 0 3 647 21 0 0 0 chr3L 8221076 8221097 -16322460 + AT_rich Low_complexity Low_complexity 1 21 0 3 647 22 0 0 0 chr3L 8222190 8222212 -16321345 + AT_rich Low_complexity Low_complexity 1 22 0 3 647 215 31 0 30 chr3L 8222872 8222905 -16320652 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 647 43 0 0 0 chr3L 8224857 8224900 -16318657 + AT_rich Low_complexity Low_complexity 1 43 0 3 647 24 53 0 0 chr3L 8225770 8225808 -16317749 + AT_rich Low_complexity Low_complexity 1 38 0 3 647 47962 3 0 0 chr3L 8226715 8231898 -16311659 - DMRT1A LINE R1 0 5183 1 3 647 212 59 0 29 chr3L 8231917 8231952 -16311605 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 647 32 0 0 0 chr3L 8233788 8233820 -16309737 + AT_rich Low_complexity Low_complexity 1 32 0 3 647 189 74 0 0 chr3L 8234375 8234402 -16309155 + (A)n Simple_repeat Simple_repeat 1 27 0 3 647 33 43 0 0 chr3L 8235118 8235165 -16308392 + AT_rich Low_complexity Low_complexity 1 47 0 3 647 22 0 0 0 chr3L 8235184 8235206 -16308351 + AT_rich Low_complexity Low_complexity 1 22 0 3 647 50 0 0 0 chr3L 8235277 8235327 -16308230 + AT_rich Low_complexity Low_complexity 1 50 0 3 647 207 231 58 0 chr3L 8236155 8236207 -16307350 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 3 647 240 149 0 0 chr3L 8236489 8236536 -16307021 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 647 219 139 0 0 chr3L 8237957 8237993 -16305564 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 647 229 321 12 18 chr3L 8238062 8238227 -16305330 + (TTTG)n Simple_repeat Simple_repeat 1 164 0 3 647 48 0 0 0 chr3L 8241140 8241188 -16302369 + AT_rich Low_complexity Low_complexity 1 48 0 3 647 186 171 0 0 chr3L 8241755 8241796 -16301761 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 647 451 122 50 109 chr3L 8242259 8242360 -16301197 - Transib-N1_DM DNA Transib -399 115 21 3 647 189 196 0 0 chr3L 8242743 8242794 -16300763 + (CAG)n Simple_repeat Simple_repeat 2 52 0 3 647 343 157 12 24 chr3L 8243874 8243959 -16299598 + ROO_I LTR Pao 632 715 -7541 3 647 192 97 0 0 chr3L 8244011 8244042 -16299515 + (CAG)n Simple_repeat Simple_repeat 1 31 0 3 647 254 29 0 28 chr3L 8245125 8245161 -16298396 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 647 21 0 0 0 chr3L 8247106 8247127 -16296430 + AT_rich Low_complexity Low_complexity 1 21 0 3 647 22 0 0 0 chr3L 8247911 8247933 -16295624 + AT_rich Low_complexity Low_complexity 1 22 0 3 647 21 0 0 0 chr3L 8248726 8248747 -16294810 + AT_rich Low_complexity Low_complexity 1 21 0 3 647 24 0 0 0 chr3L 8249282 8249306 -16294251 + AT_rich Low_complexity Low_complexity 1 24 0 3 647 186 143 0 0 chr3L 8252126 8252161 -16291396 + (CAA)n Simple_repeat Simple_repeat 1 35 0 3 647 25 0 0 0 chr3L 8252637 8252662 -16290895 + AT_rich Low_complexity Low_complexity 1 25 0 3 647 219 254 16 0 chr3L 8255743 8255806 -16287751 + A-rich Low_complexity Low_complexity 2 65 0 3 647 22 0 0 0 chr3L 8255857 8255879 -16287678 + AT_rich Low_complexity Low_complexity 1 22 0 3 648 216 67 0 0 chr3L 8260256 8260286 -16283271 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 648 189 0 0 0 chr3L 8261903 8261924 -16281633 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 648 23 54 0 0 chr3L 8263354 8263391 -16280166 + AT_rich Low_complexity Low_complexity 1 37 0 3 648 21 0 0 0 chr3L 8263728 8263749 -16279808 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 25 0 0 0 chr3L 8263994 8264019 -16279538 + AT_rich Low_complexity Low_complexity 1 25 0 3 648 21 0 0 0 chr3L 8264370 8264391 -16279166 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 222 37 0 0 chr3L 8265024 8265051 -16278506 + (TCC)n Simple_repeat Simple_repeat 3 29 0 3 648 180 0 0 0 chr3L 8267218 8267238 -16276319 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 648 214 213 0 21 chr3L 8267325 8267373 -16276184 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 648 207 0 0 0 chr3L 8268516 8268539 -16275018 + (CAT)n Simple_repeat Simple_repeat 2 24 0 3 648 28 79 0 0 chr3L 8268915 8268978 -16274579 + AT_rich Low_complexity Low_complexity 1 63 0 3 648 210 37 0 0 chr3L 8270765 8270792 -16272765 + (CCCTG)n Simple_repeat Simple_repeat 3 29 0 3 648 35 0 0 0 chr3L 8272339 8272374 -16271183 + AT_rich Low_complexity Low_complexity 1 35 0 3 648 25 31 0 0 chr3L 8272960 8272992 -16270565 + AT_rich Low_complexity Low_complexity 1 32 0 3 648 30 27 0 0 chr3L 8274794 8274831 -16268726 + AT_rich Low_complexity Low_complexity 1 37 0 3 648 23 68 0 0 chr3L 8280551 8280595 -16262962 + AT_rich Low_complexity Low_complexity 1 44 0 3 648 22 0 0 0 chr3L 8281620 8281642 -16261915 + AT_rich Low_complexity Low_complexity 1 22 0 3 648 30 0 0 0 chr3L 8283543 8283573 -16259984 + AT_rich Low_complexity Low_complexity 1 30 0 3 648 206 281 0 0 chr3L 8287458 8287522 -16256035 + (CAGAGA)n Simple_repeat Simple_repeat 3 66 0 3 648 21 36 0 0 chr3L 8289842 8289870 -16253687 + AT_rich Low_complexity Low_complexity 1 28 0 3 648 25 90 0 0 chr3L 8293042 8293109 -16250448 + AT_rich Low_complexity Low_complexity 1 67 0 3 648 22 70 0 0 chr3L 8307964 8308007 -16235550 + AT_rich Low_complexity Low_complexity 1 43 0 3 648 228 210 0 0 chr3L 8310685 8310766 -16232791 + A-rich Low_complexity Low_complexity 1 81 0 3 648 22 0 0 0 chr3L 8313115 8313137 -16230420 + AT_rich Low_complexity Low_complexity 1 22 0 3 648 35 24 0 0 chr3L 8314829 8314871 -16228686 + AT_rich Low_complexity Low_complexity 1 42 0 3 648 282 302 0 0 chr3L 8315077 8315196 -16228361 + GA-rich Low_complexity Low_complexity 1 119 0 3 648 22 70 0 0 chr3L 8315309 8315352 -16228205 + AT_rich Low_complexity Low_complexity 1 43 0 3 648 213 139 0 0 chr3L 8318804 8318847 -16224710 + (CCA)n Simple_repeat Simple_repeat 2 44 0 3 648 287 91 36 0 chr3L 8320196 8320251 -16223306 + (CAAA)n Simple_repeat Simple_repeat 3 59 0 3 648 280 253 0 11 chr3L 8320984 8321076 -16222481 + CT-rich Low_complexity Low_complexity 1 91 0 3 648 34 55 0 0 chr3L 8321407 8321462 -16222095 + AT_rich Low_complexity Low_complexity 1 55 0 3 648 23 0 0 0 chr3L 8321521 8321544 -16222013 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 29 0 0 0 chr3L 8321695 8321724 -16221833 + AT_rich Low_complexity Low_complexity 1 29 0 3 648 22 94 0 0 chr3L 8323311 8323375 -16220182 + AT_rich Low_complexity Low_complexity 1 64 0 3 648 342 138 0 0 chr3L 8325199 8325257 -16218300 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 648 207 0 0 0 chr3L 8325366 8325389 -16218168 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 648 218 125 0 24 chr3L 8326841 8326882 -16216675 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 3 648 36 0 0 0 chr3L 8339416 8339452 -16204105 + AT_rich Low_complexity Low_complexity 1 36 0 3 648 185 119 0 23 chr3L 8355753 8355796 -16187761 + (CAAAAA)n Simple_repeat Simple_repeat 3 44 0 3 648 225 196 0 0 chr3L 8355885 8355931 -16187626 + (CAGT)n Simple_repeat Simple_repeat 3 48 0 3 648 23 54 0 0 chr3L 8356096 8356133 -16187424 + AT_rich Low_complexity Low_complexity 1 37 0 3 648 198 103 0 0 chr3L 8357326 8357355 -16186202 + (GCTG)n Simple_repeat Simple_repeat 2 30 0 3 648 21 0 0 0 chr3L 8358150 8358171 -16185386 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 234 0 0 0 chr3L 8359728 8359754 -16183803 + (CAT)n Simple_repeat Simple_repeat 2 27 0 3 648 21 0 0 0 chr3L 8362324 8362345 -16181212 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 25 31 0 0 chr3L 8362595 8362627 -16180930 + AT_rich Low_complexity Low_complexity 1 32 0 3 648 393 86 0 0 chr3L 8363043 8363101 -16180456 + (CTG)n Simple_repeat Simple_repeat 2 59 0 3 648 26 0 0 0 chr3L 8364358 8364384 -16179173 + AT_rich Low_complexity Low_complexity 1 26 0 3 648 459 117 32 0 chr3L 8365169 8365263 -16178294 + (CAG)n Simple_repeat Simple_repeat 2 98 0 3 648 328 128 39 0 chr3L 8365368 8365446 -16178111 - ROO_I LTR Pao -7530 726 646 3 648 222 91 0 0 chr3L 8365743 8365776 -16177781 + (TAA)n Simple_repeat Simple_repeat 2 34 0 3 648 330 134 0 0 chr3L 8365873 8365940 -16177617 + (CCAA)n Simple_repeat Simple_repeat 2 68 0 3 648 208 163 0 23 chr3L 8366083 8366127 -16177430 + (CCGAA)n Simple_repeat Simple_repeat 2 44 0 3 648 207 0 0 0 chr3L 8366397 8366420 -16177137 + (CATCG)n Simple_repeat Simple_repeat 1 23 0 3 648 22 56 0 0 chr3L 8367687 8367723 -16175834 + AT_rich Low_complexity Low_complexity 1 36 0 3 648 186 143 0 0 chr3L 8368193 8368228 -16175329 + (A)n Simple_repeat Simple_repeat 1 35 0 3 648 216 200 0 0 chr3L 8371227 8371272 -16172285 + T-rich Low_complexity Low_complexity 1 45 0 3 648 189 121 0 0 chr3L 8372501 8372534 -16171023 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 648 204 158 0 0 chr3L 8373316 8373354 -16170203 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 648 201 74 0 0 chr3L 8375664 8375691 -16167866 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 648 217 250 0 0 chr3L 8376285 8376341 -16167216 + A-rich Low_complexity Low_complexity 1 56 0 3 648 344 282 0 0 chr3L 8379043 8379174 -16164383 + (CAA)n Simple_repeat Simple_repeat 3 133 0 3 648 258 132 0 0 chr3L 8379419 8379472 -16164085 + (CAG)n Simple_repeat Simple_repeat 2 54 0 3 648 33 43 0 0 chr3L 8383314 8383361 -16160196 + AT_rich Low_complexity Low_complexity 1 47 0 3 648 30 0 0 0 chr3L 8383599 8383629 -16159928 + AT_rich Low_complexity Low_complexity 1 30 0 3 648 25 0 0 0 chr3L 8383924 8383949 -16159608 + AT_rich Low_complexity Low_complexity 1 25 0 3 648 207 114 29 0 chr3L 8383972 8384007 -16159550 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 3 648 33 25 0 0 chr3L 8384220 8384260 -16159297 + AT_rich Low_complexity Low_complexity 1 40 0 3 648 22 35 0 0 chr3L 8385529 8385558 -16157999 + AT_rich Low_complexity Low_complexity 1 29 0 3 648 23 68 0 0 chr3L 8387221 8387265 -16156292 + AT_rich Low_complexity Low_complexity 1 44 0 3 648 40 21 0 0 chr3L 8387644 8387691 -16155866 + AT_rich Low_complexity Low_complexity 1 47 0 3 648 191 36 36 0 chr3L 8387956 8387984 -16155573 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 648 396 149 0 0 chr3L 8388421 8388488 -16155069 + DNAREP1_DM LINE Penelope 345 411 -183 3 649 44 0 0 0 chr3L 8390227 8390271 -16153286 + AT_rich Low_complexity Low_complexity 1 44 0 3 649 1341 23 111 6 chr3L 8390299 8390471 -16153086 + TC1-2_DM DNA Tc1 689 878 -766 3 649 1688 47 169 8 chr3L 8390467 8390827 -16152730 + TC1-2_DM DNA Tc1 1227 1644 0 3 649 24 32 0 0 chr3L 8390879 8390910 -16152647 + AT_rich Low_complexity Low_complexity 1 31 0 3 649 339 98 20 0 chr3L 8392247 8392298 -16151259 - DNAREP1_DM LINE Penelope -9 585 534 3 649 29 0 0 0 chr3L 8404152 8404181 -16139376 + AT_rich Low_complexity Low_complexity 1 29 0 3 649 219 36 0 0 chr3L 8406421 8406449 -16137108 + (CAG)n Simple_repeat Simple_repeat 2 29 0 3 649 183 100 0 0 chr3L 8411701 8411731 -16131826 + (T)n Simple_repeat Simple_repeat 1 30 0 3 649 225 178 0 0 chr3L 8412568 8412613 -16130944 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 649 180 176 0 0 chr3L 8412736 8412770 -16130787 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 649 189 0 0 0 chr3L 8415087 8415108 -16128449 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 3 649 29 47 0 0 chr3L 8415496 8415539 -16128018 + AT_rich Low_complexity Low_complexity 1 43 0 3 649 204 67 0 0 chr3L 8415922 8415952 -16127605 + (ATTCG)n Simple_repeat Simple_repeat 4 33 0 3 649 22 35 0 0 chr3L 8416336 8416365 -16127192 + AT_rich Low_complexity Low_complexity 1 29 0 3 649 255 31 0 0 chr3L 8416853 8416885 -16126672 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 3 649 21 0 0 0 chr3L 8417041 8417062 -16126495 + AT_rich Low_complexity Low_complexity 1 21 0 3 649 33 25 0 0 chr3L 8417892 8417932 -16125625 + AT_rich Low_complexity Low_complexity 1 40 0 3 649 315 150 0 0 chr3L 8418281 8418341 -16125216 + (CAA)n Simple_repeat Simple_repeat 1 60 0 3 649 189 0 0 0 chr3L 8420932 8420953 -16122604 + (GTTTG)n Simple_repeat Simple_repeat 1 21 0 3 649 22 0 0 0 chr3L 8421586 8421608 -16121949 + AT_rich Low_complexity Low_complexity 1 22 0 3 649 251 167 16 16 chr3L 8421720 8421781 -16121776 + A-rich Low_complexity Low_complexity 2 62 0 3 649 180 111 0 0 chr3L 8423173 8423200 -16120357 + (CGG)n Simple_repeat Simple_repeat 1 27 0 3 649 207 204 0 0 chr3L 8424302 8424346 -16119211 + A-rich Low_complexity Low_complexity 1 44 0 3 649 213 231 0 0 chr3L 8424534 8424586 -16118971 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 3 649 25 0 0 0 chr3L 8424948 8424973 -16118584 + AT_rich Low_complexity Low_complexity 1 25 0 3 649 185 108 27 0 chr3L 8426278 8426315 -16117242 + (TTTG)n Simple_repeat Simple_repeat 4 41 0 3 649 25 0 0 0 chr3L 8426341 8426366 -16117191 + AT_rich Low_complexity Low_complexity 1 25 0 3 649 183 129 0 0 chr3L 8428750 8428781 -16114776 + (CTG)n Simple_repeat Simple_repeat 3 33 0 3 649 401 178 0 0 chr3L 8430816 8430917 -16112640 - ROO_I LTR Pao -7513 743 643 3 649 302 143 0 38 chr3L 8430920 8431000 -16112557 - ROO_I LTR Pao -7539 717 641 3 649 219 150 0 0 chr3L 8431571 8431611 -16111946 + (T)n Simple_repeat Simple_repeat 1 40 0 3 649 220 164 18 18 chr3L 8431828 8431884 -16111673 + (TTTG)n Simple_repeat Simple_repeat 4 59 0 3 649 21 57 0 0 chr3L 8432733 8432768 -16110789 + AT_rich Low_complexity Low_complexity 1 35 0 3 649 26 30 0 0 chr3L 8432903 8432936 -16110621 + AT_rich Low_complexity Low_complexity 1 33 0 3 649 24 32 0 0 chr3L 8433166 8433197 -16110360 + AT_rich Low_complexity Low_complexity 1 31 0 3 649 22 70 0 0 chr3L 8433454 8433497 -16110060 + AT_rich Low_complexity Low_complexity 1 43 0 3 649 233 224 0 0 chr3L 8434256 8434314 -16109243 + T-rich Low_complexity Low_complexity 1 58 0 3 649 218 208 26 62 chr3L 8434339 8434452 -16109105 + T-rich Low_complexity Low_complexity 3 111 0 3 649 228 269 8 30 chr3L 8434636 8434770 -16108787 + T-rich Low_complexity Low_complexity 2 132 0 3 649 225 229 16 16 chr3L 8434988 8435050 -16108507 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 649 25 31 0 0 chr3L 8438360 8438392 -16105165 + AT_rich Low_complexity Low_complexity 1 32 0 3 649 25 51 0 0 chr3L 8441183 8441222 -16102335 + AT_rich Low_complexity Low_complexity 1 39 0 3 649 21 0 0 0 chr3L 8442612 8442633 -16100924 + AT_rich Low_complexity Low_complexity 1 21 0 3 649 25 51 0 0 chr3L 8442805 8442844 -16100713 + AT_rich Low_complexity Low_complexity 1 39 0 3 649 331 238 0 19 chr3L 8443266 8443369 -16100188 + (TG)n Simple_repeat Simple_repeat 1 101 0 3 649 303 237 0 31 chr3L 8443447 8443543 -16100014 + (CAA)n Simple_repeat Simple_repeat 1 93 0 3 649 219 330 11 0 chr3L 8443884 8443978 -16099579 + (CAG)n Simple_repeat Simple_repeat 3 97 0 3 649 216 97 0 0 chr3L 8443998 8444029 -16099528 + (TTG)n Simple_repeat Simple_repeat 3 33 0 3 649 278 185 12 0 chr3L 8444935 8445016 -16098541 + (CAA)n Simple_repeat Simple_repeat 1 82 0 3 649 219 114 0 0 chr3L 8445065 8445100 -16098457 + (CAT)n Simple_repeat Simple_repeat 1 35 0 3 649 204 40 0 0 chr3L 8448154 8448179 -16095378 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 649 201 74 0 0 chr3L 8448179 8448206 -16095351 + (GA)n Simple_repeat Simple_repeat 1 27 0 3 649 274 281 0 0 chr3L 8448438 8448495 -16095062 + (TTCGGG)n Simple_repeat Simple_repeat 6 62 0 3 649 267 191 0 0 chr3L 8448970 8449033 -16094524 + (ATG)n Simple_repeat Simple_repeat 1 63 0 3 649 192 40 0 0 chr3L 8449206 8449231 -16094326 + (GGA)n Simple_repeat Simple_repeat 1 25 0 3 649 543 31 0 0 chr3L 8449602 8449667 -16093890 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 649 180 152 0 0 chr3L 8449795 8449828 -16093729 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 649 207 0 0 0 chr3L 8451870 8451893 -16091664 + (TGAG)n Simple_repeat Simple_repeat 2 24 0 3 649 216 0 0 0 chr3L 8452060 8452084 -16091473 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 649 379 155 0 23 chr3L 8452946 8453032 -16090525 + (GTATG)n Simple_repeat Simple_repeat 4 87 0 3 649 180 0 0 0 chr3L 8453559 8453579 -16089978 + (CGAAT)n Simple_repeat Simple_repeat 1 20 0 3 649 279 157 0 0 chr3L 8454026 8454077 -16089480 + (TCCG)n Simple_repeat Simple_repeat 4 54 0 3 649 24 0 0 0 chr3L 8454331 8454355 -16089202 + AT_rich Low_complexity Low_complexity 1 24 0 3 649 221 222 0 0 chr3L 8456751 8456796 -16086761 + (CGG)n Simple_repeat Simple_repeat 3 47 0 3 649 204 214 24 0 chr3L 8456929 8456971 -16086586 + (CAG)n Simple_repeat Simple_repeat 2 44 0 3 649 243 226 0 0 chr3L 8457788 8457841 -16085716 + (CAG)n Simple_repeat Simple_repeat 3 55 0 3 649 201 147 0 0 chr3L 8459469 8459503 -16084054 + (CAG)n Simple_repeat Simple_repeat 1 34 0 3 649 249 262 16 16 chr3L 8460756 8460880 -16082677 + (CAG)n Simple_repeat Simple_repeat 1 124 0 3 649 22 35 0 0 chr3L 8461408 8461437 -16082120 + AT_rich Low_complexity Low_complexity 1 29 0 3 649 275 122 0 20 chr3L 8461640 8461690 -16081867 + (CAG)n Simple_repeat Simple_repeat 1 49 0 3 649 186 43 0 0 chr3L 8469955 8469978 -16073579 + (TCC)n Simple_repeat Simple_repeat 2 24 0 3 649 4017 0 0 0 chr3L 8474927 8475355 -16068202 - ROO_LTR LTR Pao 0 428 1 3 649 74783 1 1 0 chr3L 8475355 8483600 -16059957 - ROO_I LTR Pao 0 8256 1 3 649 4017 0 0 0 chr3L 8483600 8484028 -16059529 - ROO_LTR LTR Pao 0 428 1 3 649 183 114 0 0 chr3L 8484193 8484228 -16059329 + (A)n Simple_repeat Simple_repeat 1 35 0 3 649 22 0 0 0 chr3L 8484609 8484631 -16058926 + AT_rich Low_complexity Low_complexity 1 22 0 3 649 189 180 0 0 chr3L 8489305 8489355 -16054202 + (CCA)n Simple_repeat Simple_repeat 2 51 0 3 649 26 0 0 0 chr3L 8490212 8490238 -16053319 + AT_rich Low_complexity Low_complexity 1 26 0 3 649 3749 2 0 0 chr3L 8491451 8491850 -16051707 - BLOOD_LTR LTR Gypsy 0 399 1 3 649 60308 0 0 0 chr3L 8491850 8498462 -16045095 - BLOOD_I LTR Gypsy 0 6613 1 3 649 3749 2 0 0 chr3L 8498462 8498861 -16044696 - BLOOD_LTR LTR Gypsy 0 399 1 3 649 24 53 0 0 chr3L 8499066 8499104 -16044453 + AT_rich Low_complexity Low_complexity 1 38 0 3 649 221 75 25 0 chr3L 8499688 8499728 -16043829 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 649 21 57 0 0 chr3L 8502968 8503003 -16040554 + AT_rich Low_complexity Low_complexity 1 35 0 3 649 207 0 0 0 chr3L 8505799 8505822 -16037735 + (TC)n Simple_repeat Simple_repeat 1 23 0 3 649 32 67 0 32 chr3L 8518025 8518118 -16025439 + AT_rich Low_complexity Low_complexity 1 90 0 3 650 24 67 0 0 chr3L 8521329 8521374 -16022183 + AT_rich Low_complexity Low_complexity 1 45 0 3 650 29 0 0 0 chr3L 8521467 8521496 -16022061 + AT_rich Low_complexity Low_complexity 1 29 0 3 650 192 125 0 0 chr3L 8521754 8521786 -16021771 + (CATA)n Simple_repeat Simple_repeat 2 33 0 3 650 24 32 0 0 chr3L 8522129 8522160 -16021397 + AT_rich Low_complexity Low_complexity 1 31 0 3 650 192 40 0 0 chr3L 8522393 8522418 -16021139 + (CAG)n Simple_repeat Simple_repeat 1 25 0 3 650 23 0 0 0 chr3L 8523265 8523288 -16020269 + AT_rich Low_complexity Low_complexity 1 23 0 3 650 186 132 37 19 chr3L 8526737 8526791 -16016766 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 650 21 36 0 0 chr3L 8527957 8527985 -16015572 + AT_rich Low_complexity Low_complexity 1 28 0 3 650 23 0 0 0 chr3L 8530680 8530703 -16012854 + AT_rich Low_complexity Low_complexity 1 23 0 3 650 22 70 0 0 chr3L 8534510 8534553 -16009004 + AT_rich Low_complexity Low_complexity 1 43 0 3 650 28 29 0 0 chr3L 8537998 8538033 -16005524 + AT_rich Low_complexity Low_complexity 1 35 0 3 650 186 103 0 0 chr3L 8538535 8538564 -16004993 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 3 650 219 146 0 0 chr3L 8539839 8539880 -16003677 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 650 192 152 0 0 chr3L 8545086 8545119 -15998438 + (TCCA)n Simple_repeat Simple_repeat 3 35 0 3 650 205 171 0 0 chr3L 8545138 8545173 -15998384 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 650 201 121 0 0 chr3L 8548930 8548963 -15994594 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 650 180 0 0 0 chr3L 8550206 8550226 -15993331 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 650 205 256 0 34 chr3L 8562966 8563055 -15980502 + (CCCA)n Simple_repeat Simple_repeat 1 86 0 3 650 24 0 0 0 chr3L 8563184 8563208 -15980349 + AT_rich Low_complexity Low_complexity 1 24 0 3 650 21 89 0 0 chr3L 8563807 8563863 -15979694 + AT_rich Low_complexity Low_complexity 1 56 0 3 650 26 64 0 0 chr3L 8567467 8567514 -15976043 + AT_rich Low_complexity Low_complexity 1 47 0 3 650 24 53 0 0 chr3L 8569276 8569314 -15974243 + AT_rich Low_complexity Low_complexity 1 38 0 3 650 21 36 0 0 chr3L 8569593 8569621 -15973936 + AT_rich Low_complexity Low_complexity 1 28 0 3 650 288 53 0 0 chr3L 8571918 8571956 -15971601 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 650 27 0 0 0 chr3L 8572147 8572174 -15971383 + AT_rich Low_complexity Low_complexity 1 27 0 3 650 225 94 0 0 chr3L 8574984 8575016 -15968541 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 650 183 42 0 0 chr3L 8576449 8576473 -15967084 + (GGA)n Simple_repeat Simple_repeat 2 25 0 3 650 28 71 0 0 chr3L 8576733 8576789 -15966768 + AT_rich Low_complexity Low_complexity 1 56 0 3 650 237 325 0 0 chr3L 8598241 8598321 -15945236 + (TG)n Simple_repeat Simple_repeat 2 81 0 3 650 198 71 0 0 chr3L 8599664 8599692 -15943865 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 650 218 146 20 20 chr3L 8602942 8602991 -15940566 + (CCCA)n Simple_repeat Simple_repeat 2 50 0 3 650 246 271 0 0 chr3L 8604138 8604208 -15939349 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 650 211 235 57 25 chr3L 8607263 8607385 -15936172 + (GCTG)n Simple_repeat Simple_repeat 1 126 0 3 650 30 27 0 0 chr3L 8619394 8619431 -15924126 + AT_rich Low_complexity Low_complexity 1 37 0 3 650 24 0 0 0 chr3L 8622265 8622289 -15921268 + AT_rich Low_complexity Low_complexity 1 24 0 3 650 25 51 0 0 chr3L 8623486 8623525 -15920032 + AT_rich Low_complexity Low_complexity 1 39 0 3 650 21 57 0 0 chr3L 8623924 8623959 -15919598 + AT_rich Low_complexity Low_complexity 1 35 0 3 650 216 236 14 14 chr3L 8628699 8628772 -15914785 + (TA)n Simple_repeat Simple_repeat 2 74 0 3 650 251 72 0 23 chr3L 8630177 8630220 -15913337 + (CAA)n Simple_repeat Simple_repeat 1 42 0 3 650 21 57 0 0 chr3L 8630363 8630398 -15913159 + AT_rich Low_complexity Low_complexity 1 35 0 3 650 220 261 15 0 chr3L 8631458 8631523 -15912034 + (CAG)n Simple_repeat Simple_repeat 3 68 0 3 650 28 0 0 0 chr3L 8631738 8631766 -15911791 + AT_rich Low_complexity Low_complexity 1 28 0 3 650 238 193 0 34 chr3L 8632863 8632922 -15910635 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 3 650 222 91 0 0 chr3L 8633749 8633782 -15909775 + (CAG)n Simple_repeat Simple_repeat 1 33 0 3 650 21 36 0 0 chr3L 8635986 8636014 -15907543 + AT_rich Low_complexity Low_complexity 1 28 0 3 650 216 111 0 0 chr3L 8636449 8636485 -15907072 + (CAG)n Simple_repeat Simple_repeat 2 37 0 3 650 316 225 9 29 chr3L 8639056 8639161 -15904396 - ROO_I LTR Pao -7525 731 629 3 650 25 0 0 0 chr3L 8644844 8644869 -15898688 + AT_rich Low_complexity Low_complexity 1 25 0 3 650 277 60 80 0 chr3L 8644998 8645048 -15898509 + (TTATG)n Simple_repeat Simple_repeat 2 55 0 3 650 27 49 0 0 chr3L 8645290 8645331 -15898226 + AT_rich Low_complexity Low_complexity 1 41 0 3 650 231 103 0 0 chr3L 8645761 8645800 -15897757 + (GTATG)n Simple_repeat Simple_repeat 5 43 0 3 650 204 40 0 0 chr3L 8645990 8646015 -15897542 + (CGA)n Simple_repeat Simple_repeat 3 27 0 3 650 186 43 0 0 chr3L 8647796 8647819 -15895738 + (A)n Simple_repeat Simple_repeat 1 23 0 3 650 195 129 0 0 chr3L 8649753 8649784 -15893773 + (A)n Simple_repeat Simple_repeat 1 31 0 3 650 25 0 0 0 chr3L 8650332 8650357 -15893200 + AT_rich Low_complexity Low_complexity 1 25 0 3 651 22 35 0 0 chr3L 8653297 8653326 -15890231 + AT_rich Low_complexity Low_complexity 1 29 0 3 651 22 56 0 0 chr3L 8660149 8660185 -15883372 + AT_rich Low_complexity Low_complexity 1 36 0 3 651 23 54 0 0 chr3L 8662826 8662863 -15880694 + AT_rich Low_complexity Low_complexity 1 37 0 3 651 223 174 0 0 chr3L 8664061 8664107 -15879450 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 651 23 68 0 0 chr3L 8665112 8665156 -15878401 + AT_rich Low_complexity Low_complexity 1 44 0 3 651 238 125 68 27 chr3L 8666211 8666285 -15877272 + (TATAG)n Simple_repeat Simple_repeat 3 79 0 3 651 180 125 0 0 chr3L 8666896 8666928 -15876629 + (T)n Simple_repeat Simple_repeat 1 32 0 3 651 212 191 21 0 chr3L 8668195 8668242 -15875315 + (CCCA)n Simple_repeat Simple_repeat 2 49 0 3 651 186 43 0 0 chr3L 8668705 8668728 -15874829 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 651 210 71 0 0 chr3L 8668939 8668967 -15874590 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 651 210 143 0 0 chr3L 8670945 8670980 -15872577 + (CAG)n Simple_repeat Simple_repeat 2 36 0 3 651 261 255 9 9 chr3L 8671162 8671269 -15872288 + ROO_I LTR Pao 631 737 -7519 3 651 26 0 0 0 chr3L 8671831 8671857 -15871700 + AT_rich Low_complexity Low_complexity 1 26 0 3 651 264 77 0 0 chr3L 8674676 8674715 -15868842 + (CACGC)n Simple_repeat Simple_repeat 5 43 0 3 651 216 0 0 0 chr3L 8675258 8675282 -15868275 + (T)n Simple_repeat Simple_repeat 1 24 0 3 651 30 45 0 0 chr3L 8677468 8677512 -15866045 + AT_rich Low_complexity Low_complexity 1 44 0 3 651 23 33 0 0 chr3L 8681434 8681464 -15862093 + AT_rich Low_complexity Low_complexity 1 30 0 3 651 234 128 0 0 chr3L 8681893 8681932 -15861625 + (GGATG)n Simple_repeat Simple_repeat 2 40 0 3 651 201 74 0 0 chr3L 8682979 8683006 -15860551 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 3 651 25 31 0 0 chr3L 8683121 8683153 -15860404 + AT_rich Low_complexity Low_complexity 1 32 0 3 651 27 62 0 0 chr3L 8685344 8685392 -15858165 + AT_rich Low_complexity Low_complexity 1 48 0 3 651 183 42 0 0 chr3L 8686570 8686594 -15856963 + (T)n Simple_repeat Simple_repeat 1 24 0 3 651 23 54 0 0 chr3L 8687603 8687640 -15855917 + AT_rich Low_complexity Low_complexity 1 37 0 3 651 57 16 0 0 chr3L 8688042 8688106 -15855451 + AT_rich Low_complexity Low_complexity 1 64 0 3 651 23 68 0 0 chr3L 8689001 8689045 -15854512 + AT_rich Low_complexity Low_complexity 1 44 0 3 651 21 57 0 0 chr3L 8689473 8689508 -15854049 + AT_rich Low_complexity Low_complexity 1 35 0 3 651 222 156 22 0 chr3L 8689564 8689609 -15853948 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 651 234 179 0 0 chr3L 8691256 8691312 -15852245 + (CAGT)n Simple_repeat Simple_repeat 2 57 0 3 651 225 94 0 0 chr3L 8693131 8693163 -15850394 + (TATG)n Simple_repeat Simple_repeat 1 32 0 3 651 255 114 0 0 chr3L 8694610 8694654 -15848903 + (CATCC)n Simple_repeat Simple_repeat 1 44 0 3 651 22 35 0 0 chr3L 8694986 8695015 -15848542 + AT_rich Low_complexity Low_complexity 1 29 0 3 651 201 39 0 0 chr3L 8695289 8695315 -15848242 + (TTCGG)n Simple_repeat Simple_repeat 4 29 0 3 651 21 0 0 0 chr3L 8696249 8696270 -15847287 + AT_rich Low_complexity Low_complexity 1 21 0 3 651 200 170 0 41 chr3L 8697471 8697520 -15846037 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 651 25 31 0 0 chr3L 8699925 8699957 -15843600 + AT_rich Low_complexity Low_complexity 1 32 0 3 651 267 43 56 42 chr3L 8700837 8700909 -15842648 + (TATAA)n Simple_repeat Simple_repeat 5 77 0 3 651 30 0 0 0 chr3L 8700933 8700963 -15842594 + AT_rich Low_complexity Low_complexity 1 30 0 3 651 25 31 0 0 chr3L 8701013 8701045 -15842512 + AT_rich Low_complexity Low_complexity 1 32 0 3 651 239 309 0 0 chr3L 8702489 8702599 -15840958 + T-rich Low_complexity Low_complexity 1 110 0 3 651 37 69 0 0 chr3L 8703244 8703316 -15840241 + AT_rich Low_complexity Low_complexity 1 72 0 3 651 24 0 0 0 chr3L 8703810 8703834 -15839723 + AT_rich Low_complexity Low_complexity 1 24 0 3 651 180 0 0 0 chr3L 8705887 8705907 -15837650 + (GAATG)n Simple_repeat Simple_repeat 5 24 0 3 651 25 31 0 0 chr3L 8706242 8706274 -15837283 + AT_rich Low_complexity Low_complexity 1 32 0 3 651 21 0 0 0 chr3L 8707986 8708007 -15835550 + AT_rich Low_complexity Low_complexity 1 21 0 3 651 264 100 0 0 chr3L 8708869 8708909 -15834648 + (CAT)n Simple_repeat Simple_repeat 2 41 0 3 651 204 227 0 0 chr3L 8711256 8711300 -15832257 + (ATCG)n Simple_repeat Simple_repeat 3 46 0 3 651 27 29 0 0 chr3L 8711665 8711699 -15831858 + AT_rich Low_complexity Low_complexity 1 34 0 3 651 189 147 0 0 chr3L 8721910 8721944 -15821613 + (CCG)n Simple_repeat Simple_repeat 1 34 0 3 651 22 0 0 0 chr3L 8726586 8726608 -15816949 + AT_rich Low_complexity Low_complexity 1 22 0 3 651 234 91 0 0 chr3L 8731260 8731293 -15812264 + (CAT)n Simple_repeat Simple_repeat 1 33 0 3 651 23 54 0 0 chr3L 8737319 8737356 -15806201 + AT_rich Low_complexity Low_complexity 1 37 0 3 651 185 86 57 0 chr3L 8740728 8740763 -15802794 + (GAGTG)n Simple_repeat Simple_repeat 5 41 0 3 651 24 91 0 0 chr3L 8741973 8742039 -15801518 + AT_rich Low_complexity Low_complexity 1 66 0 3 651 23 0 0 0 chr3L 8745900 8745923 -15797634 + AT_rich Low_complexity Low_complexity 1 23 0 3 651 183 100 0 0 chr3L 8747242 8747272 -15796285 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 3 651 21 71 0 0 chr3L 8748907 8748949 -15794608 + AT_rich Low_complexity Low_complexity 1 42 0 3 651 246 193 0 0 chr3L 8753067 8753124 -15790433 + GA-rich Low_complexity Low_complexity 2 58 0 3 651 29 0 0 0 chr3L 8758789 8758818 -15784739 + AT_rich Low_complexity Low_complexity 1 29 0 3 651 234 155 0 65 chr3L 8764351 8764413 -15779144 + A-rich Low_complexity Low_complexity 4 61 0 3 651 216 191 0 0 chr3L 8766546 8766588 -15776969 + (CAGT)n Simple_repeat Simple_repeat 1 42 0 3 651 216 67 0 0 chr3L 8766789 8766819 -15776738 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 651 189 0 0 0 chr3L 8769692 8769713 -15773844 + (CAT)n Simple_repeat Simple_repeat 1 21 0 3 651 273 119 0 0 chr3L 8771922 8771964 -15771593 + (GCTTG)n Simple_repeat Simple_repeat 5 46 0 3 651 27 29 0 0 chr3L 8773121 8773155 -15770402 + AT_rich Low_complexity Low_complexity 1 34 0 3 651 22 70 0 0 chr3L 8776047 8776090 -15767467 + AT_rich Low_complexity Low_complexity 1 43 0 3 651 189 0 0 0 chr3L 8777686 8777707 -15765850 + (CGGT)n Simple_repeat Simple_repeat 3 23 0 3 651 22 80 0 0 chr3L 8779020 8779070 -15764487 + AT_rich Low_complexity Low_complexity 1 50 0 3 651 264 130 0 0 chr3L 8780303 8780349 -15763208 + (CCA)n Simple_repeat Simple_repeat 2 47 0 3 652 46935 1 4 0 chr3L 8784429 8789786 -15753771 + I_DM LINE I 99 5474 -757 3 652 24 32 0 0 chr3L 8790061 8790092 -15753465 + AT_rich Low_complexity Low_complexity 1 31 0 3 652 21 0 0 0 chr3L 8791195 8791216 -15752341 + AT_rich Low_complexity Low_complexity 1 21 0 3 652 29 0 0 0 chr3L 8802468 8802497 -15741060 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 24 32 0 0 chr3L 8810246 8810277 -15733280 + AT_rich Low_complexity Low_complexity 1 31 0 3 652 231 217 0 0 chr3L 8810795 8810841 -15732716 + (CAGT)n Simple_repeat Simple_repeat 3 48 0 3 652 226 211 0 50 chr3L 8812506 8812566 -15730991 + (TTCGG)n Simple_repeat Simple_repeat 4 60 0 3 652 231 264 0 0 chr3L 8814762 8814815 -15728742 + (CAG)n Simple_repeat Simple_repeat 3 55 0 3 652 29 0 0 0 chr3L 8815375 8815404 -15728153 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 216 269 0 15 chr3L 8817833 8817901 -15725656 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 652 26 30 0 0 chr3L 8818227 8818260 -15725297 + AT_rich Low_complexity Low_complexity 1 33 0 3 652 240 35 0 0 chr3L 8819012 8819041 -15724516 + (CAT)n Simple_repeat Simple_repeat 1 29 0 3 652 261 287 0 0 chr3L 8821073 8821160 -15722397 + (TG)n Simple_repeat Simple_repeat 2 88 0 3 652 209 77 109 55 chr3L 8825416 8825471 -15718086 + (CAGTT)n Simple_repeat Simple_repeat 3 60 0 3 652 228 35 0 0 chr3L 8827385 8827414 -15716143 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 3 652 27 0 0 0 chr3L 8828624 8828651 -15714906 + AT_rich Low_complexity Low_complexity 1 27 0 3 652 23 33 0 0 chr3L 8831919 8831949 -15711608 + AT_rich Low_complexity Low_complexity 1 30 0 3 652 180 0 0 0 chr3L 8834709 8834729 -15708828 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 652 24 0 0 0 chr3L 8836877 8836901 -15706656 + AT_rich Low_complexity Low_complexity 1 24 0 3 652 230 256 0 16 chr3L 8840916 8841043 -15702514 + (TTG)n Simple_repeat Simple_repeat 3 127 0 3 652 231 157 0 56 chr3L 8842734 8842788 -15700769 + (CGGTG)n Simple_repeat Simple_repeat 2 52 0 3 652 221 241 0 0 chr3L 8843970 8844024 -15699533 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 3 652 186 43 0 0 chr3L 8844868 8844891 -15698666 + (TTCGG)n Simple_repeat Simple_repeat 3 25 0 3 652 22 0 0 0 chr3L 8848016 8848038 -15695519 + AT_rich Low_complexity Low_complexity 1 22 0 3 652 37 39 0 0 chr3L 8848997 8849048 -15694509 + AT_rich Low_complexity Low_complexity 1 51 0 3 652 27 29 0 0 chr3L 8850318 8850352 -15693205 + AT_rich Low_complexity Low_complexity 1 34 0 3 652 189 0 0 0 chr3L 8850468 8850489 -15693068 + (CAGC)n Simple_repeat Simple_repeat 1 21 0 3 652 29 28 0 0 chr3L 8851752 8851788 -15691769 + AT_rich Low_complexity Low_complexity 1 36 0 3 652 180 0 0 0 chr3L 8852480 8852500 -15691057 + (CGAA)n Simple_repeat Simple_repeat 3 22 0 3 652 29 0 0 0 chr3L 8853994 8854023 -15689534 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 180 179 0 0 chr3L 8857262 8857301 -15686256 + (CAG)n Simple_repeat Simple_repeat 3 41 0 3 652 180 179 0 0 chr3L 8858293 8858332 -15685225 + (TCTG)n Simple_repeat Simple_repeat 3 41 0 3 652 224 30 30 0 chr3L 8862360 8862393 -15681164 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 3 652 210 71 0 0 chr3L 8862753 8862781 -15680776 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 652 180 200 0 0 chr3L 8864418 8864468 -15679089 + A-rich Low_complexity Low_complexity 1 50 0 3 652 423 83 0 0 chr3L 8871040 8871100 -15672457 + (CTG)n Simple_repeat Simple_repeat 3 62 0 3 652 225 132 0 0 chr3L 8872765 8872803 -15670754 + (CAT)n Simple_repeat Simple_repeat 3 40 0 3 652 219 244 37 0 chr3L 8872899 8872981 -15670576 + T-rich Low_complexity Low_complexity 3 87 0 3 652 233 254 0 0 chr3L 8874753 8874816 -15668741 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 3 652 24 32 0 0 chr3L 8875126 8875157 -15668400 + AT_rich Low_complexity Low_complexity 1 31 0 3 652 237 108 0 0 chr3L 8875715 8875752 -15667805 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 652 237 242 0 31 chr3L 8875874 8875938 -15667619 + (CCG)n Simple_repeat Simple_repeat 2 63 0 3 652 294 29 0 0 chr3L 8878452 8878487 -15665070 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 652 22 56 0 0 chr3L 8882539 8882575 -15660982 + AT_rich Low_complexity Low_complexity 1 36 0 3 652 231 88 0 0 chr3L 8883686 8883720 -15659837 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 652 23 54 0 0 chr3L 8893991 8894028 -15649529 + AT_rich Low_complexity Low_complexity 1 37 0 3 652 23 0 0 0 chr3L 8895839 8895862 -15647695 + AT_rich Low_complexity Low_complexity 1 23 0 3 652 22 35 0 0 chr3L 8896345 8896374 -15647183 + AT_rich Low_complexity Low_complexity 1 29 0 3 652 23 33 0 0 chr3L 8896410 8896440 -15647117 + AT_rich Low_complexity Low_complexity 1 30 0 3 652 24 0 0 0 chr3L 8899809 8899833 -15643724 + AT_rich Low_complexity Low_complexity 1 24 0 3 652 30 45 0 0 chr3L 8900375 8900419 -15643138 + AT_rich Low_complexity Low_complexity 1 44 0 3 652 221 231 0 0 chr3L 8901788 8901840 -15641717 + CT-rich Low_complexity Low_complexity 1 52 0 3 652 37 39 0 0 chr3L 8905338 8905389 -15638168 + AT_rich Low_complexity Low_complexity 1 51 0 3 652 21 57 0 0 chr3L 8905967 8906002 -15637555 + AT_rich Low_complexity Low_complexity 1 35 0 3 652 22 0 0 0 chr3L 8907512 8907534 -15636023 + AT_rich Low_complexity Low_complexity 1 22 0 3 652 200 222 0 0 chr3L 8911461 8911506 -15632051 + (AAATG)n Simple_repeat Simple_repeat 3 47 0 3 652 26 0 0 0 chr3L 8912507 8912533 -15631024 + AT_rich Low_complexity Low_complexity 1 26 0 3 653 218 211 18 0 chr3L 8912930 8912987 -15630570 + (CATATA)n Simple_repeat Simple_repeat 6 63 0 3 653 22 56 0 0 chr3L 8913096 8913132 -15630425 + AT_rich Low_complexity Low_complexity 1 36 0 3 653 22 35 0 0 chr3L 8915097 8915126 -15628431 + AT_rich Low_complexity Low_complexity 1 29 0 3 653 203 268 0 0 chr3L 8918185 8918226 -15625331 + (CATA)n Simple_repeat Simple_repeat 3 43 0 3 653 228 111 0 0 chr3L 8919529 8919565 -15623992 + (CAT)n Simple_repeat Simple_repeat 1 36 0 3 653 30 45 0 0 chr3L 8919747 8919791 -15623766 + AT_rich Low_complexity Low_complexity 1 44 0 3 653 21 57 0 0 chr3L 8923422 8923457 -15620100 + AT_rich Low_complexity Low_complexity 1 35 0 3 653 24 53 0 0 chr3L 8925353 8925391 -15618166 + AT_rich Low_complexity Low_complexity 1 38 0 3 653 23 33 0 0 chr3L 8927429 8927459 -15616098 + AT_rich Low_complexity Low_complexity 1 30 0 3 653 216 220 0 17 chr3L 8930114 8930174 -15613383 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 3 653 21 36 0 0 chr3L 8930806 8930834 -15612723 + AT_rich Low_complexity Low_complexity 1 28 0 3 653 24 0 0 0 chr3L 8930913 8930937 -15612620 + AT_rich Low_complexity Low_complexity 1 24 0 3 653 204 182 0 0 chr3L 8931141 8931185 -15612372 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 653 25 83 0 0 chr3L 8932096 8932156 -15611401 + AT_rich Low_complexity Low_complexity 1 60 0 3 653 31 82 0 0 chr3L 8932833 8932906 -15610651 + AT_rich Low_complexity Low_complexity 1 73 0 3 653 180 77 0 0 chr3L 8933393 8933419 -15610138 + (T)n Simple_repeat Simple_repeat 1 26 0 3 653 219 215 31 0 chr3L 8934387 8934452 -15609105 + T-rich Low_complexity Low_complexity 5 71 0 3 653 283 188 35 0 chr3L 8937492 8937577 -15605980 - ROO_I LTR Pao -7534 722 635 3 653 189 0 0 0 chr3L 8938321 8938342 -15605215 + (TGG)n Simple_repeat Simple_repeat 1 21 0 3 653 186 133 0 0 chr3L 8938917 8938947 -15604610 + (CTG)n Simple_repeat Simple_repeat 3 32 0 3 653 224 220 0 0 chr3L 8939228 8939287 -15604270 + (ATG)n Simple_repeat Simple_repeat 3 61 0 3 653 210 222 0 0 chr3L 8939362 8939407 -15604150 + (TGGG)n Simple_repeat Simple_repeat 2 46 0 3 653 201 156 0 0 chr3L 8940174 8940206 -15603351 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 653 232 29 147 0 chr3L 8940324 8940358 -15603199 - DM1731_LTR LTR Copia -222 114 76 3 653 30 45 0 0 chr3L 8944250 8944294 -15599263 + AT_rich Low_complexity Low_complexity 1 44 0 3 653 234 172 17 33 chr3L 8944843 8944903 -15598654 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 653 228 246 16 0 chr3L 8945758 8945819 -15597738 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 653 445 146 22 0 chr3L 8946457 8946546 -15597011 + Transib-N1_DM DNA Transib 21 111 -403 3 653 23 33 0 0 chr3L 8952620 8952650 -15590907 + AT_rich Low_complexity Low_complexity 1 30 0 3 653 22 0 0 0 chr3L 8957954 8957976 -15585581 + AT_rich Low_complexity Low_complexity 1 22 0 3 653 23 33 0 0 chr3L 8961506 8961536 -15582021 + AT_rich Low_complexity Low_complexity 1 30 0 3 653 23 0 0 0 chr3L 8968089 8968112 -15575445 + AT_rich Low_complexity Low_complexity 1 23 0 3 653 212 161 0 35 chr3L 8974646 8974704 -15568853 + (CACTC)n Simple_repeat Simple_repeat 4 59 0 3 653 21 0 0 0 chr3L 8975360 8975381 -15568176 + AT_rich Low_complexity Low_complexity 1 21 0 3 653 31 0 0 0 chr3L 8983932 8983963 -15559594 + AT_rich Low_complexity Low_complexity 1 31 0 3 653 21 0 0 0 chr3L 8984258 8984279 -15559278 + AT_rich Low_complexity Low_complexity 1 21 0 3 653 189 74 0 0 chr3L 8985621 8985648 -15557909 + (CTG)n Simple_repeat Simple_repeat 1 27 0 3 653 21 0 0 0 chr3L 8990801 8990822 -15552735 + AT_rich Low_complexity Low_complexity 1 21 0 3 653 225 0 0 0 chr3L 8997244 8997269 -15546288 + (TAA)n Simple_repeat Simple_repeat 2 26 0 3 653 22 35 0 0 chr3L 8997469 8997498 -15546059 + AT_rich Low_complexity Low_complexity 1 29 0 3 653 32 26 0 0 chr3L 9003039 9003078 -15540479 + AT_rich Low_complexity Low_complexity 1 39 0 3 653 208 139 0 0 chr3L 9008929 9008965 -15534592 + (T)n Simple_repeat Simple_repeat 1 36 0 3 653 180 0 0 0 chr3L 9012570 9012590 -15530967 + (TC)n Simple_repeat Simple_repeat 2 21 0 3 653 204 194 0 0 chr3L 9015004 9015040 -15528517 + (CCGAA)n Simple_repeat Simple_repeat 2 37 0 3 653 189 107 0 0 chr3L 9016585 9016613 -15526944 + (GATTG)n Simple_repeat Simple_repeat 4 31 0 3 653 192 111 0 0 chr3L 9017254 9017290 -15526267 + (TCC)n Simple_repeat Simple_repeat 3 38 0 3 653 205 162 0 0 chr3L 9021598 9021635 -15521922 + CT-rich Low_complexity Low_complexity 1 37 0 3 653 23 0 0 0 chr3L 9021897 9021920 -15521637 + AT_rich Low_complexity Low_complexity 1 23 0 3 653 231 224 0 20 chr3L 9030572 9030622 -15512935 + (TATG)n Simple_repeat Simple_repeat 3 51 0 3 653 207 88 0 0 chr3L 9031110 9031144 -15512413 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 3 653 207 214 0 18 chr3L 9033929 9033986 -15509571 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 3 653 243 61 0 0 chr3L 9035687 9035720 -15507837 + (CATAC)n Simple_repeat Simple_repeat 4 36 0 3 653 27 81 0 0 chr3L 9035953 9036015 -15507542 + AT_rich Low_complexity Low_complexity 1 62 0 3 653 37 23 0 0 chr3L 9041890 9041934 -15501623 + AT_rich Low_complexity Low_complexity 1 44 0 3 654 180 0 0 0 chr3L 9047032 9047052 -15496505 + (CAGTG)n Simple_repeat Simple_repeat 1 20 0 3 654 22 35 0 0 chr3L 9047996 9048025 -15495532 + AT_rich Low_complexity Low_complexity 1 29 0 3 654 252 0 0 0 chr3L 9049003 9049031 -15494526 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 654 24 53 0 0 chr3L 9050118 9050156 -15493401 + AT_rich Low_complexity Low_complexity 1 38 0 3 654 27 0 0 0 chr3L 9051047 9051074 -15492483 + AT_rich Low_complexity Low_complexity 1 27 0 3 654 255 61 0 0 chr3L 9054664 9054697 -15488860 + (CAT)n Simple_repeat Simple_repeat 1 33 0 3 654 249 146 0 0 chr3L 9062455 9062503 -15481054 + (TTG)n Simple_repeat Simple_repeat 1 48 0 3 654 3927 6 0 64 chr3L 9070081 9070595 -15472962 + T412LTR LTR LTR 1 481 0 3 654 58455 1 1 1 chr3L 9070281 9077180 -15466377 + DM412 LTR Gypsy 1 6897 0 3 654 3927 6 0 64 chr3L 9077070 9077584 -15465973 + T412LTR LTR LTR 1 481 0 3 654 186 103 0 0 chr3L 9082677 9082706 -15460851 + (CCA)n Simple_repeat Simple_repeat 2 30 0 3 654 25 31 0 0 chr3L 9085991 9086023 -15457534 + AT_rich Low_complexity Low_complexity 1 32 0 3 654 201 74 0 0 chr3L 9090509 9090536 -15453021 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 654 23 54 0 0 chr3L 9090743 9090780 -15452777 + AT_rich Low_complexity Low_complexity 1 37 0 3 654 224 244 24 48 chr3L 9090944 9091069 -15452488 + T-rich Low_complexity Low_complexity 3 124 0 3 654 23 0 0 0 chr3L 9091102 9091125 -15452432 + AT_rich Low_complexity Low_complexity 1 23 0 3 654 202 56 56 0 chr3L 9091321 9091357 -15452200 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 654 24 0 0 0 chr3L 9091491 9091515 -15452042 + AT_rich Low_complexity Low_complexity 1 24 0 3 654 25 65 0 0 chr3L 9091708 9091754 -15451803 + AT_rich Low_complexity Low_complexity 1 46 0 3 654 35 24 0 0 chr3L 9093543 9093585 -15449972 + AT_rich Low_complexity Low_complexity 1 42 0 3 654 267 160 40 0 chr3L 9093990 9094065 -15449492 + (TA)n Simple_repeat Simple_repeat 1 78 0 3 654 237 65 0 0 chr3L 9094239 9094270 -15449287 + (TATG)n Simple_repeat Simple_repeat 2 32 0 3 654 24 0 0 0 chr3L 9094699 9094723 -15448834 + AT_rich Low_complexity Low_complexity 1 24 0 3 654 197 83 28 0 chr3L 9096225 9096261 -15447296 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 654 262 80 20 20 chr3L 9096678 9096729 -15446828 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 654 21 36 0 0 chr3L 9097008 9097036 -15446521 + AT_rich Low_complexity Low_complexity 1 28 0 3 654 227 93 23 0 chr3L 9098526 9098569 -15444988 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 654 218 262 12 12 chr3L 9098847 9098928 -15444629 + (TG)n Simple_repeat Simple_repeat 1 81 0 3 654 207 255 0 0 chr3L 9099307 9099354 -15444203 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 654 267 206 0 64 chr3L 9099480 9099589 -15443968 + (TTG)n Simple_repeat Simple_repeat 1 102 0 3 654 212 0 0 35 chr3L 9099700 9099729 -15443828 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 654 319 125 0 27 chr3L 9100075 9100149 -15443408 + (TTG)n Simple_repeat Simple_repeat 1 72 0 3 654 180 0 0 0 chr3L 9100306 9100326 -15443231 + (TGG)n Simple_repeat Simple_repeat 1 20 0 3 654 21 0 0 0 chr3L 9100500 9100521 -15443036 + AT_rich Low_complexity Low_complexity 1 21 0 3 654 198 0 0 0 chr3L 9100846 9100868 -15442689 + (TTGG)n Simple_repeat Simple_repeat 3 24 0 3 654 21 0 0 0 chr3L 9101020 9101041 -15442516 + AT_rich Low_complexity Low_complexity 1 21 0 3 654 22 35 0 0 chr3L 9101516 9101545 -15442012 + AT_rich Low_complexity Low_complexity 1 29 0 3 654 225 0 0 0 chr3L 9104496 9104521 -15439036 + (TTA)n Simple_repeat Simple_repeat 1 25 0 3 654 23 0 0 0 chr3L 9105083 9105106 -15438451 + AT_rich Low_complexity Low_complexity 1 23 0 3 654 203 252 0 78 chr3L 9105116 9105232 -15438325 + (CGAAA)n Simple_repeat Simple_repeat 4 110 0 3 654 239 163 0 20 chr3L 9105131 9105205 -15438352 + (CGGAA)n Simple_repeat Simple_repeat 1 72 0 3 654 264 100 0 0 chr3L 9105370 9105410 -15438147 + (TAG)n Simple_repeat Simple_repeat 3 42 0 3 654 180 219 0 0 chr3L 9106460 9106501 -15437056 + (CGAAT)n Simple_repeat Simple_repeat 5 45 0 3 654 233 109 22 0 chr3L 9106954 9107000 -15436557 + (CAG)n Simple_repeat Simple_repeat 1 47 0 3 654 204 254 48 0 chr3L 9108874 9108937 -15434620 + (CCCA)n Simple_repeat Simple_repeat 4 69 0 3 654 216 184 0 0 chr3L 9108898 9108936 -15434621 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 3 654 369 86 0 0 chr3L 9108943 9109001 -15434556 + (CAGT)n Simple_repeat Simple_repeat 3 60 0 3 654 21 36 0 0 chr3L 9110517 9110545 -15433012 + AT_rich Low_complexity Low_complexity 1 28 0 3 654 186 103 0 0 chr3L 9111130 9111159 -15432398 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 654 233 128 21 0 chr3L 9111468 9111515 -15432042 + (CAT)n Simple_repeat Simple_repeat 1 48 0 3 654 219 36 0 0 chr3L 9111668 9111696 -15431861 + (CAG)n Simple_repeat Simple_repeat 2 29 0 3 654 207 162 0 0 chr3L 9112044 9112081 -15431476 + (TATG)n Simple_repeat Simple_repeat 4 40 0 3 654 237 65 0 0 chr3L 9114433 9114464 -15429093 + (CAGAG)n Simple_repeat Simple_repeat 3 33 0 3 654 201 159 0 0 chr3L 9115615 9115659 -15427898 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 654 192 40 0 0 chr3L 9117298 9117323 -15426234 + (TTG)n Simple_repeat Simple_repeat 2 26 0 3 654 201 241 0 33 chr3L 9117830 9117890 -15425667 + (CATA)n Simple_repeat Simple_repeat 1 58 0 3 654 22 56 0 0 chr3L 9118942 9118978 -15424579 + AT_rich Low_complexity Low_complexity 1 36 0 3 654 229 186 0 0 chr3L 9120254 9120297 -15423260 + GA-rich Low_complexity Low_complexity 2 44 0 3 654 197 65 0 31 chr3L 9120880 9120912 -15422645 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 654 204 267 0 0 chr3L 9122147 9122192 -15421365 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 654 22 0 0 0 chr3L 9122305 9122327 -15421230 + AT_rich Low_complexity Low_complexity 1 22 0 3 654 28034 1 3 7 chr3L 9123703 9127416 -15416141 - DM412 LTR Gypsy 0 6897 1 3 654 28 29 0 0 chr3L 9130427 9130462 -15413095 + AT_rich Low_complexity Low_complexity 1 35 0 3 654 24 0 0 0 chr3L 9131450 9131474 -15412083 + AT_rich Low_complexity Low_complexity 1 24 0 3 654 31 0 0 0 chr3L 9131572 9131603 -15411954 + AT_rich Low_complexity Low_complexity 1 31 0 3 654 356 0 23 0 chr3L 9134631 9134675 -15408882 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 654 26 30 0 0 chr3L 9136527 9136560 -15406997 + AT_rich Low_complexity Low_complexity 1 33 0 3 654 23 54 0 0 chr3L 9137966 9138003 -15405554 + AT_rich Low_complexity Low_complexity 1 37 0 3 654 315 0 0 0 chr3L 9138050 9138085 -15405472 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 654 255 234 0 0 chr3L 9139077 9139141 -15404416 + T-rich Low_complexity Low_complexity 6 69 0 3 654 24 0 0 0 chr3L 9140186 9140210 -15403347 + AT_rich Low_complexity Low_complexity 1 24 0 3 654 240 122 0 0 chr3L 9142143 9142184 -15401373 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 654 221 159 0 0 chr3L 9142459 9142503 -15401054 + T-rich Low_complexity Low_complexity 1 44 0 3 654 211 200 15 44 chr3L 9144391 9144459 -15399098 + (CCG)n Simple_repeat Simple_repeat 1 66 0 3 654 232 233 0 0 chr3L 9145722 9145782 -15397775 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 654 270 239 0 58 chr3L 9147261 9147381 -15396176 + (TTG)n Simple_repeat Simple_repeat 2 114 0 3 654 275 72 0 23 chr3L 9148495 9148538 -15395019 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 654 23 0 0 0 chr3L 9148795 9148818 -15394739 + AT_rich Low_complexity Low_complexity 1 23 0 3 654 201 39 0 0 chr3L 9149454 9149480 -15394077 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 654 23 33 0 0 chr3L 9149508 9149538 -15394019 + AT_rich Low_complexity Low_complexity 1 30 0 3 654 180 0 0 0 chr3L 9149797 9149817 -15393740 + (TTG)n Simple_repeat Simple_repeat 1 20 0 3 654 276 53 0 0 chr3L 9151200 9151238 -15392319 + (TTG)n Simple_repeat Simple_repeat 3 40 0 3 654 246 32 0 0 chr3L 9151344 9151375 -15392182 + (TTG)n Simple_repeat Simple_repeat 1 31 0 3 654 216 0 0 0 chr3L 9152614 9152638 -15390919 + (T)n Simple_repeat Simple_repeat 1 24 0 3 654 217 78 0 73 chr3L 9152867 9152922 -15390635 + (TTG)n Simple_repeat Simple_repeat 1 51 0 3 654 180 0 0 0 chr3L 9154899 9154919 -15388638 + (T)n Simple_repeat Simple_repeat 1 20 0 3 654 195 69 0 0 chr3L 9155694 9155723 -15387834 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 3 654 204 135 0 0 chr3L 9156088 9156125 -15387432 + (ATTCG)n Simple_repeat Simple_repeat 4 40 0 3 654 221 243 0 14 chr3L 9156988 9157059 -15386498 + (TG)n Simple_repeat Simple_repeat 1 70 0 3 654 216 214 0 35 chr3L 9157230 9157288 -15386269 + (TAG)n Simple_repeat Simple_repeat 3 58 0 3 654 7959 1 0 0 chr3L 9157853 9158757 -15384800 + HOBO DNA hAT 1 904 -2112 3 654 4353 0 0 10 chr3L 9158755 9159259 -15384298 + HOBO DNA hAT 2518 3016 0 3 654 218 29 0 56 chr3L 9159798 9159834 -15383723 + (TTG)n Simple_repeat Simple_repeat 2 35 0 3 654 24 91 0 0 chr3L 9160406 9160472 -15383085 + AT_rich Low_complexity Low_complexity 1 66 0 3 654 332 226 28 19 chr3L 9161646 9161754 -15381803 + (CAGAGA)n Simple_repeat Simple_repeat 6 114 0 3 654 252 154 0 0 chr3L 9162029 9162081 -15381476 + (TTG)n Simple_repeat Simple_repeat 2 53 0 3 654 252 122 0 0 chr3L 9162869 9162910 -15380647 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 3 654 183 42 0 0 chr3L 9163432 9163456 -15380101 + (TA)n Simple_repeat Simple_repeat 1 24 0 3 654 23 0 0 0 chr3L 9164222 9164245 -15379312 + AT_rich Low_complexity Low_complexity 1 23 0 3 654 264 30 0 0 chr3L 9168086 9168119 -15375438 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 654 216 171 0 0 chr3L 9168296 9168337 -15375220 + (CAGG)n Simple_repeat Simple_repeat 3 43 0 3 654 220 216 0 0 chr3L 9170476 9170527 -15373030 + T-rich Low_complexity Low_complexity 1 51 0 3 654 204 146 24 0 chr3L 9170544 9170585 -15372972 + (TTG)n Simple_repeat Simple_repeat 2 43 0 3 654 183 42 0 0 chr3L 9171117 9171141 -15372416 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 654 24 53 0 0 chr3L 9171900 9171938 -15371619 + AT_rich Low_complexity Low_complexity 1 38 0 3 654 26 30 0 0 chr3L 9172017 9172050 -15371507 + AT_rich Low_complexity Low_complexity 1 33 0 3 654 29 60 0 0 chr3L 9173958 9174008 -15369549 + AT_rich Low_complexity Low_complexity 1 50 0 3 654 228 35 0 0 chr3L 9174514 9174543 -15369014 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 654 201 229 0 0 chr3L 9174744 9174779 -15368778 + (CGTG)n Simple_repeat Simple_repeat 1 35 0 3 655 183 222 0 0 chr3L 9175509 9175554 -15368003 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 655 185 180 20 0 chr3L 9175715 9175765 -15367792 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 655 200 311 0 0 chr3L 9176909 9176970 -15366587 + (TG)n Simple_repeat Simple_repeat 1 61 0 3 655 201 39 0 0 chr3L 9178604 9178630 -15364927 + (CTCTG)n Simple_repeat Simple_repeat 2 27 0 3 655 270 298 11 0 chr3L 9179481 9179575 -15363982 + (CAA)n Simple_repeat Simple_repeat 1 95 0 3 655 228 100 0 0 chr3L 9180571 9180611 -15362946 + (A)n Simple_repeat Simple_repeat 1 40 0 3 655 209 204 0 0 chr3L 9181439 9181483 -15362074 + GA-rich Low_complexity Low_complexity 2 45 0 3 655 225 163 0 0 chr3L 9181645 9181694 -15361863 + (TTG)n Simple_repeat Simple_repeat 2 50 0 3 655 242 220 0 17 chr3L 9181880 9181940 -15361617 + (TTG)n Simple_repeat Simple_repeat 1 59 0 3 655 183 80 0 0 chr3L 9181967 9181992 -15361565 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 655 200 281 0 0 chr3L 9184006 9184063 -15359494 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 3 655 24 32 0 0 chr3L 9186192 9186223 -15357334 + AT_rich Low_complexity Low_complexity 1 31 0 3 655 219 88 0 0 chr3L 9186494 9186528 -15357029 + (AGGTG)n Simple_repeat Simple_repeat 2 35 0 3 655 229 254 0 29 chr3L 9186589 9186658 -15356899 + (CAA)n Simple_repeat Simple_repeat 2 68 0 3 655 276 342 0 0 chr3L 9187782 9187896 -15355661 + A-rich Low_complexity Low_complexity 1 114 0 3 655 22 0 0 0 chr3L 9187949 9187971 -15355586 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 190 106 43 0 chr3L 9188349 9188396 -15355161 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 655 201 187 32 42 chr3L 9190186 9190281 -15353276 + (TTTAA)n Simple_repeat Simple_repeat 3 96 0 3 655 29 0 0 0 chr3L 9191138 9191167 -15352390 + AT_rich Low_complexity Low_complexity 1 29 0 3 655 260 91 23 0 chr3L 9191870 9191914 -15351643 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 655 240 86 0 0 chr3L 9200572 9200607 -15342950 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 3 655 33 0 0 0 chr3L 9202314 9202347 -15341210 + AT_rich Low_complexity Low_complexity 1 33 0 3 655 270 0 0 0 chr3L 9212403 9212433 -15331124 + (T)n Simple_repeat Simple_repeat 1 30 0 3 655 5154 5 0 7 chr3L 9212433 9213008 -15330549 - LINEJ1_DM LINE Jockey 0 5020 4450 3 655 180 0 0 0 chr3L 9216583 9216603 -15326954 + (T)n Simple_repeat Simple_repeat 1 20 0 3 655 190 91 67 22 chr3L 9216697 9216742 -15326815 + A-rich Low_complexity Low_complexity 2 48 0 3 655 189 74 0 0 chr3L 9216862 9216889 -15326668 + (CAG)n Simple_repeat Simple_repeat 1 27 0 3 655 234 62 0 0 chr3L 9219680 9219712 -15323845 + (CAG)n Simple_repeat Simple_repeat 1 32 0 3 655 215 132 57 0 chr3L 9220080 9220133 -15323424 + (CAGT)n Simple_repeat Simple_repeat 1 56 0 3 655 208 143 0 0 chr3L 9220859 9220894 -15322663 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 3 655 24 0 0 0 chr3L 9225060 9225084 -15318473 + AT_rich Low_complexity Low_complexity 1 24 0 3 655 207 0 0 0 chr3L 9226863 9226886 -15316671 + (A)n Simple_repeat Simple_repeat 1 23 0 3 655 25 31 0 0 chr3L 9230744 9230776 -15312781 + AT_rich Low_complexity Low_complexity 1 32 0 3 655 183 42 0 0 chr3L 9233223 9233247 -15310310 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 655 281 188 12 0 chr3L 9236077 9236157 -15307400 + (CACCAT)n Simple_repeat Simple_repeat 3 83 0 3 655 22 0 0 0 chr3L 9237065 9237087 -15306470 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 189 0 0 0 chr3L 9237092 9237113 -15306444 + (T)n Simple_repeat Simple_repeat 1 21 0 3 655 234 0 0 0 chr3L 9240510 9240536 -15303021 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 655 190 95 48 0 chr3L 9240901 9240943 -15302614 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 655 209 208 0 0 chr3L 9241125 9241219 -15302338 + (TATATG)n Simple_repeat Simple_repeat 1 94 0 3 655 260 260 13 0 chr3L 9242777 9242854 -15300703 + (TG)n Simple_repeat Simple_repeat 2 79 0 3 655 246 240 0 0 chr3L 9244735 9244785 -15298772 + (TTG)n Simple_repeat Simple_repeat 3 52 0 3 655 208 220 0 33 chr3L 9245485 9245546 -15298011 + A-rich Low_complexity Low_complexity 6 64 0 3 655 483 95 0 0 chr3L 9245640 9245714 -15297843 + (ACTG)n Simple_repeat Simple_repeat 1 74 0 3 655 282 132 0 0 chr3L 9248445 9248498 -15295059 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 655 24 0 0 0 chr3L 9248644 9248668 -15294889 + AT_rich Low_complexity Low_complexity 1 24 0 3 655 213 208 0 36 chr3L 9250259 9250314 -15293243 + A-rich Low_complexity Low_complexity 1 53 0 3 655 201 74 0 0 chr3L 9250460 9250487 -15293070 + (CTG)n Simple_repeat Simple_repeat 3 29 0 3 655 204 255 0 0 chr3L 9254658 9254705 -15288852 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 655 219 222 0 0 chr3L 9255562 9255607 -15287950 + C-rich Low_complexity Low_complexity 5 49 0 3 655 22 0 0 0 chr3L 9256416 9256438 -15287119 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 237 163 0 0 chr3L 9256775 9256824 -15286733 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 655 183 167 0 0 chr3L 9257020 9257062 -15286495 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 655 210 154 0 0 chr3L 9260362 9260401 -15283156 + GA-rich Low_complexity Low_complexity 2 40 0 3 655 180 125 0 0 chr3L 9261092 9261124 -15282433 + (TCCGG)n Simple_repeat Simple_repeat 4 35 0 3 655 216 167 0 0 chr3L 9261207 9261255 -15282302 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 655 23 0 0 0 chr3L 9261796 9261819 -15281738 + AT_rich Low_complexity Low_complexity 1 23 0 3 655 205 350 0 12 chr3L 9262117 9262198 -15281359 + (CGG)n Simple_repeat Simple_repeat 2 81 0 3 655 4017 0 0 0 chr3L 9263772 9264200 -15279357 - ROO_LTR LTR Pao 0 428 1 3 655 11152 0 1 0 chr3L 9264200 9265426 -15278131 - ROO_I LTR Pao 0 8256 7030 3 655 50033 2 28 0 chr3L 9265414 9271041 -15272516 - ROO_I LTR Pao -2475 5781 1 3 655 4017 0 0 0 chr3L 9271041 9271469 -15272088 - ROO_LTR LTR Pao 0 428 1 3 655 195 42 0 0 chr3L 9273224 9273248 -15270309 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 655 189 74 0 0 chr3L 9273282 9273309 -15270248 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 655 37 0 0 0 chr3L 9277471 9277508 -15266049 + AT_rich Low_complexity Low_complexity 1 37 0 3 655 25 65 0 0 chr3L 9278211 9278257 -15265300 + AT_rich Low_complexity Low_complexity 1 46 0 3 655 28 0 0 0 chr3L 9278939 9278967 -15264590 + AT_rich Low_complexity Low_complexity 1 28 0 3 655 207 69 0 0 chr3L 9279453 9279482 -15264075 + (TTCGG)n Simple_repeat Simple_repeat 1 29 0 3 655 25 0 0 0 chr3L 9280051 9280076 -15263481 + AT_rich Low_complexity Low_complexity 1 25 0 3 655 189 0 0 0 chr3L 9282555 9282576 -15260981 + (CCAA)n Simple_repeat Simple_repeat 4 24 0 3 655 192 40 0 0 chr3L 9284450 9284475 -15259082 + (CTA)n Simple_repeat Simple_repeat 2 26 0 3 655 183 114 0 0 chr3L 9291927 9291962 -15251595 + (T)n Simple_repeat Simple_repeat 1 35 0 3 655 234 0 0 0 chr3L 9293153 9293179 -15250378 + (TTTCG)n Simple_repeat Simple_repeat 5 30 0 3 655 201 167 0 0 chr3L 9294035 9294071 -15249486 + T-rich Low_complexity Low_complexity 1 36 0 3 655 192 158 0 0 chr3L 9294666 9294704 -15248853 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 655 216 0 0 0 chr3L 9294827 9294851 -15248706 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 655 195 42 0 0 chr3L 9295183 9295207 -15248350 + (CATA)n Simple_repeat Simple_repeat 3 26 0 3 655 301 136 30 0 chr3L 9295991 9296057 -15247500 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 655 208 241 19 0 chr3L 9300102 9300156 -15243401 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 655 195 42 0 0 chr3L 9300894 9300918 -15242639 + (AGATG)n Simple_repeat Simple_repeat 1 24 0 3 655 206 128 26 0 chr3L 9301290 9301329 -15242228 + A-rich Low_complexity Low_complexity 4 43 0 3 655 320 208 0 0 chr3L 9304671 9304748 -15238809 - ROO_I LTR Pao -7516 740 664 3 656 183 42 0 0 chr3L 9306235 9306259 -15237298 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 656 246 269 0 0 chr3L 9309175 9309227 -15234330 + polypurine Low_complexity Low_complexity 4 55 0 3 656 215 61 30 0 chr3L 9310622 9310655 -15232902 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 656 23 0 0 0 chr3L 9314359 9314382 -15229175 + AT_rich Low_complexity Low_complexity 1 23 0 3 656 191 133 22 0 chr3L 9314762 9314807 -15228750 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 656 306 138 0 0 chr3L 9315358 9315416 -15228141 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 3 656 248 91 0 22 chr3L 9315780 9315825 -15227732 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 656 192 234 0 0 chr3L 9315994 9316041 -15227516 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 656 22 70 0 0 chr3L 9320185 9320228 -15223329 + AT_rich Low_complexity Low_complexity 1 43 0 3 656 309 100 0 0 chr3L 9320929 9320979 -15222578 + (CAA)n Simple_repeat Simple_repeat 2 51 0 3 656 30 0 0 0 chr3L 9326442 9326472 -15217085 + AT_rich Low_complexity Low_complexity 1 30 0 3 656 22 0 0 0 chr3L 9327120 9327142 -15216415 + AT_rich Low_complexity Low_complexity 1 22 0 3 656 29 28 0 0 chr3L 9328258 9328294 -15215263 + AT_rich Low_complexity Low_complexity 1 36 0 3 656 21 0 0 0 chr3L 9329615 9329636 -15213921 + AT_rich Low_complexity Low_complexity 1 21 0 3 656 21 36 0 0 chr3L 9331103 9331131 -15212426 + AT_rich Low_complexity Low_complexity 1 28 0 3 656 23 0 0 0 chr3L 9331942 9331965 -15211592 + AT_rich Low_complexity Low_complexity 1 23 0 3 656 22 0 0 0 chr3L 9332295 9332317 -15211240 + AT_rich Low_complexity Low_complexity 1 22 0 3 656 213 175 0 0 chr3L 9332508 9332548 -15211009 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 656 216 135 0 0 chr3L 9332734 9332771 -15210786 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 656 22 35 0 0 chr3L 9336893 9336922 -15206635 + AT_rich Low_complexity Low_complexity 1 29 0 3 656 32 0 0 0 chr3L 9338564 9338596 -15204961 + AT_rich Low_complexity Low_complexity 1 32 0 3 656 41 0 0 0 chr3L 9341634 9341675 -15201882 + AT_rich Low_complexity Low_complexity 1 41 0 3 656 25 31 0 0 chr3L 9353062 9353094 -15190463 + AT_rich Low_complexity Low_complexity 1 32 0 3 656 32 0 0 0 chr3L 9353180 9353212 -15190345 + AT_rich Low_complexity Low_complexity 1 32 0 3 656 21 36 0 0 chr3L 9360229 9360257 -15183300 + AT_rich Low_complexity Low_complexity 1 28 0 3 656 200 184 20 20 chr3L 9361142 9361192 -15182365 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 656 180 0 0 0 chr3L 9361551 9361571 -15181986 + (CCAA)n Simple_repeat Simple_repeat 2 21 0 3 656 25 0 0 0 chr3L 9364688 9364713 -15178844 + AT_rich Low_complexity Low_complexity 1 25 0 3 656 185 0 40 0 chr3L 9366584 9366609 -15176948 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 3 656 22 35 0 0 chr3L 9368104 9368133 -15175424 + AT_rich Low_complexity Low_complexity 1 29 0 3 656 205 179 43 29 chr3L 9370531 9370600 -15172957 + GA-rich Low_complexity Low_complexity 1 70 0 3 656 198 0 0 0 chr3L 9373235 9373257 -15170300 + (GCTG)n Simple_repeat Simple_repeat 3 24 0 3 656 200 224 0 20 chr3L 9373356 9373406 -15170151 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 3 656 210 150 0 0 chr3L 9374641 9374681 -15168876 + (CATA)n Simple_repeat Simple_repeat 3 42 0 3 656 205 213 0 21 chr3L 9376133 9376181 -15167376 + (CATA)n Simple_repeat Simple_repeat 1 47 0 3 656 198 208 0 0 chr3L 9376413 9376461 -15167096 + (TA)n Simple_repeat Simple_repeat 1 48 0 3 656 235 259 0 0 chr3L 9376704 9376758 -15166799 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 656 204 93 0 100 chr3L 9377935 9377995 -15165562 + GA-rich Low_complexity Low_complexity 2 55 0 3 656 31 26 0 0 chr3L 9378766 9378804 -15164753 + AT_rich Low_complexity Low_complexity 1 38 0 3 656 31 26 0 0 chr3L 9379947 9379985 -15163572 + AT_rich Low_complexity Low_complexity 1 38 0 3 656 267 31 0 0 chr3L 9383548 9383580 -15159977 + (CAATC)n Simple_repeat Simple_repeat 4 35 0 3 656 25483 1 0 0 chr3L 9385629 9388389 -15155168 + DOC LINE Jockey 1966 4725 0 3 656 258 81 0 0 chr3L 9388418 9388455 -15155102 + (CAGGA)n Simple_repeat Simple_repeat 1 37 0 3 656 21 0 0 0 chr3L 9390088 9390109 -15153448 + AT_rich Low_complexity Low_complexity 1 21 0 3 656 220 220 0 0 chr3L 9391491 9391541 -15152016 + T-rich Low_complexity Low_complexity 1 50 0 3 656 24 67 0 0 chr3L 9396136 9396181 -15147376 + AT_rich Low_complexity Low_complexity 1 45 0 3 656 194 62 31 0 chr3L 9399631 9399663 -15143894 + (TTG)n Simple_repeat Simple_repeat 1 33 0 3 656 378 42 0 0 chr3L 9400665 9400713 -15142844 + (TGGA)n Simple_repeat Simple_repeat 4 51 0 3 656 26 64 0 0 chr3L 9404003 9404050 -15139507 + AT_rich Low_complexity Low_complexity 1 47 0 3 656 205 217 0 42 chr3L 9406538 9406586 -15136971 + (CAG)n Simple_repeat Simple_repeat 1 46 0 3 656 186 171 0 0 chr3L 9407724 9407765 -15135792 + (TTCGGG)n Simple_repeat Simple_repeat 4 44 0 3 656 23 0 0 0 chr3L 9408474 9408497 -15135060 + AT_rich Low_complexity Low_complexity 1 23 0 3 656 259 298 18 18 chr3L 9409378 9409549 -15134008 + (CTG)n Simple_repeat Simple_repeat 1 171 0 3 656 264 111 0 0 chr3L 9409699 9409744 -15133813 + (CTG)n Simple_repeat Simple_repeat 1 45 0 3 656 180 0 0 0 chr3L 9410223 9410243 -15133314 + (CCA)n Simple_repeat Simple_repeat 2 21 0 3 656 22 35 0 0 chr3L 9410638 9410667 -15132890 + AT_rich Low_complexity Low_complexity 1 29 0 3 656 219 36 0 0 chr3L 9411253 9411281 -15132276 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 656 23 54 0 0 chr3L 9423152 9423189 -15120368 + AT_rich Low_complexity Low_complexity 1 37 0 3 656 24 0 0 0 chr3L 9424891 9424915 -15118642 + AT_rich Low_complexity Low_complexity 1 24 0 3 656 22 0 0 0 chr3L 9425242 9425264 -15118293 + AT_rich Low_complexity Low_complexity 1 22 0 3 656 234 128 0 0 chr3L 9426790 9426829 -15116728 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 656 21 0 0 0 chr3L 9428708 9428729 -15114828 + AT_rich Low_complexity Low_complexity 1 21 0 3 656 186 43 0 0 chr3L 9430383 9430406 -15113151 + (CAA)n Simple_repeat Simple_repeat 3 25 0 3 656 260 197 87 79 chr3L 9431788 9431915 -15111642 - ROO_I LTR Pao -7487 769 642 3 656 183 80 0 0 chr3L 9432170 9432195 -15111362 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 656 22 0 0 0 chr3L 9432816 9432838 -15110719 + AT_rich Low_complexity Low_complexity 1 22 0 3 656 1359 117 90 0 chr3L 9432882 9433104 -15110453 - DNAREP1_DM LINE Penelope -3 591 350 3 656 822 158 19 112 chr3L 9433099 9433305 -15110252 - DNAREP1_DM LINE Penelope -406 188 2 3 656 195 42 0 0 chr3L 9434248 9434272 -15109285 + (CTG)n Simple_repeat Simple_repeat 1 24 0 3 656 230 122 0 0 chr3L 9434847 9434888 -15108669 - ROO_I LTR Pao -7521 735 695 3 656 207 188 0 0 chr3L 9434889 9434937 -15108620 + (CGG)n Simple_repeat Simple_repeat 1 48 0 3 656 34 24 0 0 chr3L 9435571 9435612 -15107945 + AT_rich Low_complexity Low_complexity 1 41 0 3 656 22 56 0 0 chr3L 9435810 9435846 -15107711 + AT_rich Low_complexity Low_complexity 1 36 0 3 656 750 193 202 24 chr3L 9436082 9436374 -15107183 + HETA LINE telomeric 5729 6072 -9 3 656 32 0 0 0 chr3L 9436557 9436589 -15106968 + AT_rich Low_complexity Low_complexity 1 32 0 3 10 12514 91 3 1 chr3L 9436665 9438397 -15105160 - S_DM DNA Tc1 0 1736 1 3 657 1045 111 122 6 chr3L 9438569 9438750 -15104807 - DMCR1A LINE CR1 -201 4269 4068 3 657 259 159 0 0 chr3L 9439427 9439471 -15104086 + DNAREP1_DM LINE Penelope 29 72 -522 3 657 1800 73 110 15 chr3L 9439570 9439833 -15103724 + DNAREP1_DM LINE Penelope 307 594 0 3 657 397 188 133 52 chr3L 9439717 9439852 -15103705 - P_DG DNA P 0 2888 2743 3 657 33 0 0 0 chr3L 9441281 9441314 -15102243 + AT_rich Low_complexity Low_complexity 1 33 0 3 657 22 56 0 0 chr3L 9454434 9454470 -15089087 + AT_rich Low_complexity Low_complexity 1 36 0 3 657 22 0 0 0 chr3L 9456041 9456063 -15087494 + AT_rich Low_complexity Low_complexity 1 22 0 3 657 206 222 0 22 chr3L 9456158 9456204 -15087353 + (CAG)n Simple_repeat Simple_repeat 2 46 0 3 657 230 237 0 22 chr3L 9459402 9459481 -15084076 + CT-rich Low_complexity Low_complexity 1 77 0 3 657 264 282 14 0 chr3L 9460425 9460496 -15083061 + (TATG)n Simple_repeat Simple_repeat 2 73 0 3 657 201 159 0 0 chr3L 9460936 9460980 -15082577 + (CAA)n Simple_repeat Simple_repeat 1 44 0 3 657 292 206 10 71 chr3L 9461178 9461277 -15082280 + A-rich Low_complexity Low_complexity 3 95 0 3 657 237 170 19 0 chr3L 9462316 9462369 -15081188 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 657 210 229 0 0 chr3L 9462558 9462606 -15080951 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 657 201 74 0 0 chr3L 9463543 9463570 -15079987 + (CAT)n Simple_repeat Simple_repeat 2 28 0 3 657 30 0 0 0 chr3L 9463865 9463895 -15079662 + AT_rich Low_complexity Low_complexity 1 30 0 3 657 284 155 14 0 chr3L 9464237 9464308 -15079249 + (CAA)n Simple_repeat Simple_repeat 3 74 0 3 657 240 343 0 22 chr3L 9464401 9464538 -15079019 + (CAG)n Simple_repeat Simple_repeat 3 136 0 3 657 315 177 0 0 chr3L 9464557 9464636 -15078921 + ROO_I LTR Pao 656 734 -7522 3 657 22 0 0 0 chr3L 9465527 9465549 -15078008 + AT_rich Low_complexity Low_complexity 1 22 0 3 657 22 0 0 0 chr3L 9466008 9466030 -15077527 + AT_rich Low_complexity Low_complexity 1 22 0 3 657 333 239 0 0 chr3L 9466288 9466376 -15077181 + ROO_I LTR Pao 641 728 -7528 3 657 225 154 0 0 chr3L 9467671 9467710 -15075847 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 657 226 213 32 16 chr3L 9468006 9468068 -15075489 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 3 657 267 225 0 0 chr3L 9470399 9470470 -15073087 + (TA)n Simple_repeat Simple_repeat 1 71 0 3 657 248 241 28 0 chr3L 9473041 9473149 -15070408 + GA-rich Low_complexity Low_complexity 5 115 0 3 657 24 0 0 0 chr3L 9482894 9482918 -15060639 + AT_rich Low_complexity Low_complexity 1 24 0 3 657 210 231 0 0 chr3L 9485380 9485445 -15058112 + (CAT)n Simple_repeat Simple_repeat 3 67 0 3 657 22 0 0 0 chr3L 9494793 9494815 -15048742 + AT_rich Low_complexity Low_complexity 1 22 0 3 657 4017 0 0 0 chr3L 9494855 9495283 -15048274 + ROO_LTR LTR Pao 1 428 0 3 657 216 0 0 0 chr3L 9496019 9496043 -15047514 + (A)n Simple_repeat Simple_repeat 1 24 0 3 657 43 20 0 0 chr3L 9496583 9496633 -15046924 + AT_rich Low_complexity Low_complexity 1 50 0 3 657 37 23 0 0 chr3L 9498577 9498621 -15044936 + AT_rich Low_complexity Low_complexity 1 44 0 3 657 200 227 0 0 chr3L 9500186 9500230 -15043327 + (ATTTG)n Simple_repeat Simple_repeat 4 47 0 3 657 28 48 0 0 chr3L 9501994 9502036 -15041521 + AT_rich Low_complexity Low_complexity 1 42 0 3 657 183 42 0 0 chr3L 9502240 9502264 -15041293 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 657 204 97 0 0 chr3L 9516581 9516612 -15026945 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 657 223 104 20 20 chr3L 9518749 9518798 -15024759 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 657 192 77 0 0 chr3L 9518916 9518942 -15024615 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 657 14000 1 0 1 chr3L 9519640 9521262 -15022295 - DOC LINE Jockey 0 4725 3106 3 657 29 60 0 0 chr3L 9523840 9523890 -15019667 + AT_rich Low_complexity Low_complexity 1 50 0 3 657 210 162 0 0 chr3L 9524759 9524796 -15018761 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 3 657 22 0 0 0 chr3L 9526253 9526275 -15017282 + AT_rich Low_complexity Low_complexity 1 22 0 3 657 58083 1 1 9 chr3L 9526907 9534410 -15009147 + DM412 LTR Gypsy 1 6897 0 3 657 25 31 0 0 chr3L 9535166 9535198 -15008359 + AT_rich Low_complexity Low_complexity 1 32 0 3 657 22 0 0 0 chr3L 9541416 9541438 -15002119 + AT_rich Low_complexity Low_complexity 1 22 0 3 657 267 79 0 0 chr3L 9542026 9542064 -15001493 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 657 186 43 0 0 chr3L 9543882 9543905 -14999652 + (TAA)n Simple_repeat Simple_repeat 2 24 0 3 657 216 86 0 0 chr3L 9544377 9544412 -14999145 + (A)n Simple_repeat Simple_repeat 1 35 0 3 657 23 0 0 0 chr3L 9544852 9544875 -14998682 + AT_rich Low_complexity Low_complexity 1 23 0 3 657 208 307 0 0 chr3L 9545025 9545100 -14998457 + A-rich Low_complexity Low_complexity 2 76 0 3 657 183 266 0 0 chr3L 9546277 9546341 -14997216 + (CCCGAA)n Simple_repeat Simple_repeat 3 66 0 3 657 229 109 21 21 chr3L 9547434 9547481 -14996076 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 657 216 158 0 0 chr3L 9547685 9547723 -14995834 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3 657 30 27 0 0 chr3L 9549657 9549694 -14993863 + AT_rich Low_complexity Low_complexity 1 37 0 3 657 210 37 0 0 chr3L 9549869 9549896 -14993661 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 657 23 54 0 0 chr3L 9552302 9552339 -14991218 + AT_rich Low_complexity Low_complexity 1 37 0 3 657 24 0 0 0 chr3L 9552530 9552554 -14991003 + AT_rich Low_complexity Low_complexity 1 24 0 3 657 223 163 0 0 chr3L 9560780 9560823 -14982734 + (CCAA)n Simple_repeat Simple_repeat 1 43 0 3 657 24 32 0 0 chr3L 9561439 9561470 -14982087 + AT_rich Low_complexity Low_complexity 1 31 0 3 657 186 103 0 0 chr3L 9562507 9562536 -14981021 + (AACTG)n Simple_repeat Simple_repeat 2 30 0 3 657 180 0 0 0 chr3L 9565061 9565081 -14978476 + (T)n Simple_repeat Simple_repeat 1 20 0 3 657 2183 0 0 15 chr3L 9565081 9565345 -14978212 - LINEJ1_DM LINE Jockey 0 5020 4761 3 657 24 32 0 0 chr3L 9567415 9567446 -14976111 + AT_rich Low_complexity Low_complexity 1 31 0 3 658 46586 6 0 0 chr3L 9569070 9574081 -14969476 - LINEJ1_DM LINE Jockey 0 5020 10 3 658 23 0 0 0 chr3L 9575397 9575420 -14968137 + AT_rich Low_complexity Low_complexity 1 23 0 3 658 21 95 0 0 chr3L 9576768 9576831 -14966726 + AT_rich Low_complexity Low_complexity 1 63 0 3 658 207 167 0 0 chr3L 9577839 9577881 -14965676 + (TTTCG)n Simple_repeat Simple_repeat 3 44 0 3 658 26 0 0 0 chr3L 9579688 9579714 -14963843 + AT_rich Low_complexity Low_complexity 1 26 0 3 658 22 35 0 0 chr3L 9583318 9583347 -14960210 + AT_rich Low_complexity Low_complexity 1 29 0 3 658 43 0 0 0 chr3L 9585118 9585161 -14958396 + AT_rich Low_complexity Low_complexity 1 43 0 3 658 315 71 0 0 chr3L 9585987 9586029 -14957528 + (CAG)n Simple_repeat Simple_repeat 3 44 0 3 658 227 114 0 22 chr3L 9586111 9586156 -14957401 + (CAG)n Simple_repeat Simple_repeat 2 45 0 3 658 257 279 0 71 chr3L 9586615 9586700 -14956857 + ROO_I LTR Pao 648 726 -7530 3 658 252 122 0 0 chr3L 9588502 9588543 -14955014 + (CGAAA)n Simple_repeat Simple_repeat 3 43 0 3 658 23 33 0 0 chr3L 9590246 9590276 -14953281 + AT_rich Low_complexity Low_complexity 1 30 0 3 658 26 64 0 0 chr3L 9597279 9597326 -14946231 + AT_rich Low_complexity Low_complexity 1 47 0 3 658 21 0 0 0 chr3L 9597360 9597381 -14946176 + AT_rich Low_complexity Low_complexity 1 21 0 3 658 24 0 0 0 chr3L 9598555 9598579 -14944978 + AT_rich Low_complexity Low_complexity 1 24 0 3 658 428 0 0 0 chr3L 9605724 9605776 -14937781 + ALA_DM Unknown Unknown 1 52 0 3 658 21 0 0 0 chr3L 9610840 9610861 -14932696 + AT_rich Low_complexity Low_complexity 1 21 0 3 658 24 0 0 0 chr3L 9611043 9611067 -14932490 + AT_rich Low_complexity Low_complexity 1 24 0 3 658 198 0 0 0 chr3L 9622679 9622701 -14920856 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 658 21 57 0 0 chr3L 9636457 9636492 -14907065 + AT_rich Low_complexity Low_complexity 1 35 0 3 658 180 152 0 0 chr3L 9637035 9637068 -14906489 + (CTG)n Simple_repeat Simple_repeat 3 35 0 3 658 218 136 68 0 chr3L 9639106 9639150 -14904407 + T-rich Low_complexity Low_complexity 3 49 0 3 658 30 0 0 0 chr3L 9643397 9643427 -14900130 + AT_rich Low_complexity Low_complexity 1 30 0 3 658 21 36 0 0 chr3L 9648533 9648561 -14894996 + AT_rich Low_complexity Low_complexity 1 28 0 3 658 418 229 0 43 chr3L 9658447 9658634 -14884923 + T-rich Low_complexity Low_complexity 1 179 0 3 658 203 114 23 0 chr3L 9658815 9658859 -14884698 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 658 24 0 0 0 chr3L 9660996 9661020 -14882537 + AT_rich Low_complexity Low_complexity 1 24 0 3 658 358 161 35 0 chr3L 9664257 9664344 -14879213 - ROO_I LTR Pao -7523 733 644 3 658 255 61 0 0 chr3L 9668888 9668921 -14874636 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 658 195 162 0 0 chr3L 9670396 9670433 -14873124 + (TGG)n Simple_repeat Simple_repeat 2 38 0 3 658 195 100 0 0 chr3L 9671088 9671118 -14872439 + (TATG)n Simple_repeat Simple_repeat 3 32 0 3 658 249 119 0 0 chr3L 9671422 9671464 -14872093 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 658 22 35 0 0 chr3L 9674184 9674213 -14869344 + AT_rich Low_complexity Low_complexity 1 29 0 3 658 198 131 0 62 chr3L 9676690 9676755 -14866802 + T-rich Low_complexity Low_complexity 2 62 0 3 658 228 149 0 0 chr3L 9676924 9676971 -14866586 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 658 23 0 0 0 chr3L 9677563 9677586 -14865971 + AT_rich Low_complexity Low_complexity 1 23 0 3 658 22 56 0 0 chr3L 9680675 9680711 -14862846 + AT_rich Low_complexity Low_complexity 1 36 0 3 658 25 83 0 0 chr3L 9681075 9681135 -14862422 + AT_rich Low_complexity Low_complexity 1 60 0 3 658 219 229 0 0 chr3L 9681706 9681754 -14861803 + GA-rich Low_complexity Low_complexity 1 48 0 3 658 201 39 0 0 chr3L 9683066 9683092 -14860465 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 658 21 0 0 0 chr3L 9683385 9683406 -14860151 + AT_rich Low_complexity Low_complexity 1 21 0 3 658 240 59 0 0 chr3L 9683462 9683496 -14860061 + (T)n Simple_repeat Simple_repeat 1 34 0 3 658 21 36 0 0 chr3L 9684254 9684282 -14859275 + AT_rich Low_complexity Low_complexity 1 28 0 3 658 29 0 0 0 chr3L 9686796 9686825 -14856732 + AT_rich Low_complexity Low_complexity 1 29 0 3 658 26 0 0 0 chr3L 9686860 9686886 -14856671 + AT_rich Low_complexity Low_complexity 1 26 0 3 658 22 0 0 0 chr3L 9687827 9687849 -14855708 + AT_rich Low_complexity Low_complexity 1 22 0 3 658 26 0 0 0 chr3L 9687965 9687991 -14855566 + AT_rich Low_complexity Low_complexity 1 26 0 3 658 27 49 0 0 chr3L 9688797 9688838 -14854719 + AT_rich Low_complexity Low_complexity 1 41 0 3 658 180 97 0 0 chr3L 9693318 9693349 -14850208 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3 658 24 32 0 0 chr3L 9697007 9697038 -14846519 + AT_rich Low_complexity Low_complexity 1 31 0 3 658 22 0 0 0 chr3L 9697289 9697311 -14846246 + AT_rich Low_complexity Low_complexity 1 22 0 3 658 213 154 0 0 chr3L 9697939 9697978 -14845579 + (CAA)n Simple_repeat Simple_repeat 2 40 0 3 658 245 298 0 0 chr3L 9698765 9698869 -14844688 + (CAG)n Simple_repeat Simple_repeat 2 105 0 3 659 219 268 0 27 chr3L 9701762 9701883 -14841674 + (CAA)n Simple_repeat Simple_repeat 1 117 0 3 659 370 194 0 0 chr3L 9702067 9702170 -14841387 + ROO_I LTR Pao 641 743 -7513 3 659 248 255 75 0 chr3L 9702170 9702264 -14841293 + ROO_I LTR Pao 645 745 -7511 3 659 207 203 0 0 chr3L 9702767 9702826 -14840731 + A-rich Low_complexity Low_complexity 1 59 0 3 659 180 0 0 0 chr3L 9702950 9702970 -14840587 + (TTA)n Simple_repeat Simple_repeat 1 20 0 3 659 206 105 26 0 chr3L 9704211 9704249 -14839308 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 659 264 238 0 16 chr3L 9707827 9707920 -14835637 + (TG)n Simple_repeat Simple_repeat 1 91 0 3 659 314 291 0 48 chr3L 9708910 9709098 -14834459 + (CCA)n Simple_repeat Simple_repeat 1 179 0 3 659 24 0 0 0 chr3L 9710129 9710153 -14833404 + AT_rich Low_complexity Low_complexity 1 24 0 3 659 201 132 0 0 chr3L 9710748 9710786 -14832771 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 659 24 0 0 0 chr3L 9710794 9710818 -14832739 + AT_rich Low_complexity Low_complexity 1 24 0 3 659 21 71 0 0 chr3L 9712234 9712276 -14831281 + AT_rich Low_complexity Low_complexity 1 42 0 3 659 29 0 0 0 chr3L 9719735 9719764 -14823793 + AT_rich Low_complexity Low_complexity 1 29 0 3 659 22 56 0 0 chr3L 9719882 9719918 -14823639 + AT_rich Low_complexity Low_complexity 1 36 0 3 659 203 213 13 0 chr3L 9720560 9720635 -14822922 + (CAG)n Simple_repeat Simple_repeat 2 77 0 3 659 201 167 0 0 chr3L 9722058 9722094 -14821463 + A-rich Low_complexity Low_complexity 5 40 0 3 659 21 0 0 0 chr3L 9722718 9722739 -14820818 + AT_rich Low_complexity Low_complexity 1 21 0 3 659 30 100 0 0 chr3L 9722916 9723016 -14820541 + AT_rich Low_complexity Low_complexity 1 100 0 3 659 213 159 0 0 chr3L 9727984 9728028 -14815529 + (ATG)n Simple_repeat Simple_repeat 3 46 0 3 659 239 54 27 0 chr3L 9730528 9730565 -14812992 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 659 216 97 0 0 chr3L 9735250 9735281 -14808276 + (GTATG)n Simple_repeat Simple_repeat 3 33 0 3 659 22 0 0 0 chr3L 9736501 9736523 -14807034 + AT_rich Low_complexity Low_complexity 1 22 0 3 659 207 269 0 0 chr3L 9738405 9738457 -14805100 + (TTG)n Simple_repeat Simple_repeat 1 52 0 3 659 25 0 0 0 chr3L 9738741 9738766 -14804791 + AT_rich Low_complexity Low_complexity 1 25 0 3 659 192 125 0 0 chr3L 9742658 9742690 -14800867 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 659 22 0 0 0 chr3L 9743923 9743945 -14799612 + AT_rich Low_complexity Low_complexity 1 22 0 3 659 21 57 0 0 chr3L 9745148 9745183 -14798374 + AT_rich Low_complexity Low_complexity 1 35 0 3 659 228 231 0 0 chr3L 9746212 9746264 -14797293 + (CTG)n Simple_repeat Simple_repeat 3 54 0 3 659 21 0 0 0 chr3L 9748894 9748915 -14794642 + AT_rich Low_complexity Low_complexity 1 21 0 3 659 245 288 0 12 chr3L 9750593 9750674 -14792883 + (TA)n Simple_repeat Simple_repeat 2 81 0 3 659 201 94 0 0 chr3L 9750769 9750801 -14792756 + (T)n Simple_repeat Simple_repeat 1 32 0 3 659 25 31 0 0 chr3L 9751483 9751515 -14792042 + AT_rich Low_complexity Low_complexity 1 32 0 3 659 21 36 0 0 chr3L 9756357 9756385 -14787172 + AT_rich Low_complexity Low_complexity 1 28 0 3 659 27 0 0 0 chr3L 9757537 9757564 -14785993 + AT_rich Low_complexity Low_complexity 1 27 0 3 659 21 0 0 0 chr3L 9760445 9760466 -14783091 + AT_rich Low_complexity Low_complexity 1 21 0 3 659 224 246 0 14 chr3L 9763184 9763254 -14780303 + (CATATA)n Simple_repeat Simple_repeat 6 74 0 3 659 22 70 0 0 chr3L 9765024 9765067 -14778490 + AT_rich Low_complexity Low_complexity 1 43 0 3 659 228 86 0 0 chr3L 9767428 9767463 -14776094 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 659 216 111 0 0 chr3L 9768778 9768814 -14774743 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 659 198 150 0 0 chr3L 9769135 9769175 -14774382 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 659 23 86 0 0 chr3L 9769588 9769646 -14773911 + AT_rich Low_complexity Low_complexity 1 58 0 3 659 23 33 0 0 chr3L 9773185 9773215 -14770342 + AT_rich Low_complexity Low_complexity 1 30 0 3 659 219 189 0 0 chr3L 9774553 9774606 -14768951 + (CAA)n Simple_repeat Simple_repeat 3 55 0 3 659 282 115 0 0 chr3L 9780666 9780718 -14762839 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 659 183 42 0 0 chr3L 9783392 9783416 -14760141 + (AGATG)n Simple_repeat Simple_repeat 1 24 0 3 659 27 0 0 0 chr3L 9784585 9784612 -14758945 + AT_rich Low_complexity Low_complexity 1 27 0 3 659 231 61 0 0 chr3L 9785128 9785161 -14758396 + (CTG)n Simple_repeat Simple_repeat 1 33 0 3 659 25 51 0 0 chr3L 9787343 9787382 -14756175 + AT_rich Low_complexity Low_complexity 1 39 0 3 659 253 214 21 43 chr3L 9792010 9792103 -14751454 + (CATA)n Simple_repeat Simple_repeat 4 94 0 3 659 22 0 0 0 chr3L 9794410 9794432 -14749125 + AT_rich Low_complexity Low_complexity 1 22 0 3 659 217 164 14 29 chr3L 9801698 9801767 -14741790 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 3 659 22 0 0 0 chr3L 9802288 9802310 -14741247 + AT_rich Low_complexity Low_complexity 1 22 0 3 659 351 132 0 0 chr3L 9803197 9803250 -14740307 - DNAREP1_DM LINE Penelope 0 594 542 3 659 26 30 0 0 chr3L 9803280 9803313 -14740244 + AT_rich Low_complexity Low_complexity 1 33 0 3 659 27 29 0 0 chr3L 9804643 9804677 -14738880 + AT_rich Low_complexity Low_complexity 1 34 0 3 659 264 250 0 0 chr3L 9804912 9804968 -14738589 + (TTCGGG)n Simple_repeat Simple_repeat 5 60 0 3 659 410 122 206 20 chr3L 9805407 9805559 -14737998 + DNAREP1_DM LINE Penelope 244 315 -279 3 659 455 116 0 0 chr3L 9805666 9805735 -14737822 + DNAREP1_DM LINE Penelope 526 594 0 3 659 216 97 0 0 chr3L 9806512 9806543 -14737014 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 659 234 0 0 0 chr3L 9806739 9806765 -14736792 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 659 285 29 0 0 chr3L 9807093 9807127 -14736430 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 659 227 31 31 0 chr3L 9807273 9807305 -14736252 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 659 201 121 0 0 chr3L 9809038 9809071 -14734486 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 3 659 21 0 0 0 chr3L 9809335 9809356 -14734201 + GC_rich Low_complexity Low_complexity 1 21 0 3 659 273 57 0 0 chr3L 9809500 9809535 -14734022 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 659 22 35 0 0 chr3L 9809846 9809875 -14733682 + AT_rich Low_complexity Low_complexity 1 29 0 3 659 270 73 0 0 chr3L 9810453 9810494 -14733063 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 659 21 36 0 0 chr3L 9810938 9810966 -14732591 + AT_rich Low_complexity Low_complexity 1 28 0 3 659 229 268 0 14 chr3L 9811545 9811617 -14731940 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 659 245 212 47 12 chr3L 9811815 9811901 -14731656 + ROO_I LTR Pao 651 739 -7517 3 659 21 0 0 0 chr3L 9812619 9812640 -14730917 + AT_rich Low_complexity Low_complexity 1 21 0 3 659 21 0 0 0 chr3L 9814043 9814064 -14729493 + AT_rich Low_complexity Low_complexity 1 21 0 3 659 206 159 0 22 chr3L 9815482 9815527 -14728030 + A-rich Low_complexity Low_complexity 2 45 0 3 659 24 0 0 0 chr3L 9817479 9817503 -14726054 + AT_rich Low_complexity Low_complexity 1 24 0 3 659 248 270 11 0 chr3L 9819368 9819457 -14724100 + (CCA)n Simple_repeat Simple_repeat 2 91 0 3 659 213 195 0 0 chr3L 9820487 9820528 -14723029 + (CCG)n Simple_repeat Simple_repeat 2 42 0 3 659 267 79 0 0 chr3L 9822033 9822071 -14721486 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 659 222 91 0 0 chr3L 9823282 9823315 -14720242 + (CAG)n Simple_repeat Simple_repeat 3 35 0 3 659 234 105 0 0 chr3L 9824218 9824256 -14719301 + (CAG)n Simple_repeat Simple_repeat 3 40 0 3 659 200 143 0 58 chr3L 9825343 9825395 -14718162 + (CAG)n Simple_repeat Simple_repeat 1 49 0 3 659 192 40 0 0 chr3L 9825439 9825464 -14718093 + (CAG)n Simple_repeat Simple_repeat 1 25 0 3 659 237 65 0 0 chr3L 9825612 9825643 -14717914 + (CAG)n Simple_repeat Simple_repeat 3 33 0 3 659 180 77 0 0 chr3L 9826142 9826168 -14717389 + (CAA)n Simple_repeat Simple_repeat 1 26 0 3 659 260 91 23 0 chr3L 9826931 9826975 -14716582 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 659 208 216 0 0 chr3L 9829350 9829387 -14714170 + (CTG)n Simple_repeat Simple_repeat 1 37 0 3 659 402 74 0 0 chr3L 9830320 9830374 -14713183 + (CTG)n Simple_repeat Simple_repeat 1 54 0 3 660 582 114 0 0 chr3L 9830444 9830532 -14713025 + (CTG)n Simple_repeat Simple_repeat 2 89 0 3 660 26 30 0 0 chr3L 9831866 9831899 -14711658 + AT_rich Low_complexity Low_complexity 1 33 0 3 660 247 200 0 51 chr3L 9833833 9833912 -14709645 - ROO_I LTR Pao -7524 732 658 3 660 372 130 0 0 chr3L 9834003 9834072 -14709485 + (CTG)n Simple_repeat Simple_repeat 1 69 0 3 660 317 159 0 0 chr3L 9839517 9839630 -14703927 + (TATATG)n Simple_repeat Simple_repeat 1 113 0 3 660 186 133 0 0 chr3L 9842024 9842054 -14701503 + (A)n Simple_repeat Simple_repeat 1 30 0 3 660 185 108 0 26 chr3L 9843220 9843258 -14700299 + (CAA)n Simple_repeat Simple_repeat 3 39 0 3 660 186 71 0 0 chr3L 9845072 9845100 -14698457 + (CACAG)n Simple_repeat Simple_repeat 2 29 0 3 660 195 42 0 0 chr3L 9845181 9845205 -14698352 + (AACTG)n Simple_repeat Simple_repeat 3 26 0 3 660 208 277 0 15 chr3L 9845616 9845682 -14697875 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 660 26 0 0 0 chr3L 9848503 9848529 -14695028 + AT_rich Low_complexity Low_complexity 1 26 0 3 660 27 49 0 0 chr3L 9848654 9848695 -14694862 + AT_rich Low_complexity Low_complexity 1 41 0 3 660 24 32 0 0 chr3L 9849594 9849625 -14693932 + AT_rich Low_complexity Low_complexity 1 31 0 3 660 189 121 0 0 chr3L 9851000 9851033 -14692524 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 660 30 59 0 0 chr3L 9853051 9853102 -14690455 + AT_rich Low_complexity Low_complexity 1 51 0 3 660 183 139 0 0 chr3L 9858343 9858379 -14685178 + (CAA)n Simple_repeat Simple_repeat 3 38 0 3 660 27 0 0 0 chr3L 9859041 9859068 -14684489 + AT_rich Low_complexity Low_complexity 1 27 0 3 660 198 103 0 0 chr3L 9859347 9859376 -14684181 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 660 22 0 0 0 chr3L 9860183 9860205 -14683352 + AT_rich Low_complexity Low_complexity 1 22 0 3 660 290 361 0 0 chr3L 9861389 9861533 -14682024 + (CGA)n Simple_repeat Simple_repeat 1 144 0 3 660 264 170 0 0 chr3L 9861612 9861665 -14681892 + (ATG)n Simple_repeat Simple_repeat 3 55 0 3 660 317 347 0 0 chr3L 9862917 9863041 -14680516 + (CGA)n Simple_repeat Simple_repeat 2 125 0 3 660 202 209 0 0 chr3L 9864736 9864779 -14678778 + (CGATA)n Simple_repeat Simple_repeat 5 47 0 3 660 204 40 0 0 chr3L 9866440 9866465 -14677092 + (T)n Simple_repeat Simple_repeat 1 25 0 3 660 231 36 0 0 chr3L 9867025 9867053 -14676504 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 3 660 237 139 0 0 chr3L 9869327 9869370 -14674187 + (CAT)n Simple_repeat Simple_repeat 3 45 0 3 660 30 45 0 0 chr3L 9869459 9869503 -14674054 + AT_rich Low_complexity Low_complexity 1 44 0 3 660 27 29 0 0 chr3L 9870619 9870653 -14672904 + AT_rich Low_complexity Low_complexity 1 34 0 3 660 201 94 0 0 chr3L 9871062 9871094 -14672463 + (TATAG)n Simple_repeat Simple_repeat 4 35 0 3 660 21 0 0 0 chr3L 9871620 9871641 -14671916 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 27 0 0 0 chr3L 9872865 9872892 -14670665 + AT_rich Low_complexity Low_complexity 1 27 0 3 660 28 29 0 0 chr3L 9873097 9873132 -14670425 + AT_rich Low_complexity Low_complexity 1 35 0 3 660 25 51 0 0 chr3L 9874325 9874364 -14669193 + AT_rich Low_complexity Low_complexity 1 39 0 3 660 22 0 0 0 chr3L 9874536 9874558 -14668999 + GC_rich Low_complexity Low_complexity 1 22 0 3 660 189 74 0 0 chr3L 9875689 9875716 -14667841 + (CAG)n Simple_repeat Simple_repeat 1 27 0 3 660 462 88 0 0 chr3L 9875861 9875929 -14667628 + (CAG)n Simple_repeat Simple_repeat 1 68 0 3 660 200 133 0 62 chr3L 9877813 9877861 -14665696 + CT-rich Low_complexity Low_complexity 5 49 0 3 660 228 67 0 0 chr3L 9877891 9877921 -14665636 + (TTC)n Simple_repeat Simple_repeat 2 31 0 3 660 25 108 0 0 chr3L 9881947 9882049 -14661508 + AT_rich Low_complexity Low_complexity 1 102 0 3 660 23 0 0 0 chr3L 9887659 9887682 -14655875 + AT_rich Low_complexity Low_complexity 1 23 0 3 660 28 29 0 0 chr3L 9888783 9888818 -14654739 + AT_rich Low_complexity Low_complexity 1 35 0 3 660 239 267 0 16 chr3L 9892585 9892646 -14650911 + (TTG)n Simple_repeat Simple_repeat 1 60 0 3 660 21 0 0 0 chr3L 9895850 9895871 -14647686 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 204 167 0 23 chr3L 9896849 9896892 -14646665 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3 660 21 71 0 0 chr3L 9896988 9897030 -14646527 + AT_rich Low_complexity Low_complexity 1 42 0 3 660 25 0 0 0 chr3L 9897660 9897685 -14645872 + AT_rich Low_complexity Low_complexity 1 25 0 3 660 201 121 0 0 chr3L 9899136 9899169 -14644388 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 660 204 219 0 0 chr3L 9899515 9899556 -14644001 + (TTGG)n Simple_repeat Simple_repeat 3 43 0 3 660 37 23 0 0 chr3L 9901889 9901933 -14641624 + AT_rich Low_complexity Low_complexity 1 44 0 3 660 24 32 0 0 chr3L 9902627 9902658 -14640899 + AT_rich Low_complexity Low_complexity 1 31 0 3 660 21 36 0 0 chr3L 9903310 9903338 -14640219 + AT_rich Low_complexity Low_complexity 1 28 0 3 660 21 0 0 0 chr3L 9903971 9903992 -14639565 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 21 0 0 0 chr3L 9904540 9904561 -14638996 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 28 61 0 0 chr3L 9906087 9906136 -14637421 + AT_rich Low_complexity Low_complexity 1 49 0 3 660 29 0 0 0 chr3L 9907032 9907061 -14636496 + AT_rich Low_complexity Low_complexity 1 29 0 3 660 30 59 0 0 chr3L 9909267 9909318 -14634239 + AT_rich Low_complexity Low_complexity 1 51 0 3 660 291 71 0 0 chr3L 9909744 9909786 -14633771 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 660 180 0 0 0 chr3L 9911948 9911968 -14631589 + (CTGTG)n Simple_repeat Simple_repeat 1 20 0 3 660 222 62 0 0 chr3L 9912951 9912983 -14630574 + (A)n Simple_repeat Simple_repeat 1 32 0 3 660 203 208 21 0 chr3L 9914476 9914524 -14629033 + (TTGG)n Simple_repeat Simple_repeat 4 52 0 3 660 243 61 0 0 chr3L 9914587 9914620 -14628937 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 660 21 0 0 0 chr3L 9914963 9914984 -14628573 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 21 0 0 0 chr3L 9921164 9921185 -14622372 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 231 36 0 0 chr3L 9922458 9922486 -14621071 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 3 660 3722 2 0 2 chr3L 9922822 9923251 -14620306 + ROO_LTR LTR Pao 1 428 0 3 660 4518 3 12 151 chr3L 9923251 9923994 -14619563 + ROO_I LTR Pao 1 640 -7616 3 660 540 116 0 0 chr3L 9923994 9924080 -14619477 + (CAG)n Simple_repeat Simple_repeat 1 86 0 3 660 60120 0 0 0 chr3L 9924080 9931115 -14612442 + ROO_I LTR Pao 1221 8256 0 3 660 3752 2 0 0 chr3L 9931115 9931543 -14612014 + ROO_LTR LTR Pao 1 428 0 3 660 22 0 0 0 chr3L 9931779 9931801 -14611756 + AT_rich Low_complexity Low_complexity 1 22 0 3 660 24 53 0 0 chr3L 9933740 9933778 -14609779 + AT_rich Low_complexity Low_complexity 1 38 0 3 660 21 0 0 0 chr3L 9937042 9937063 -14606494 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 22 35 0 0 chr3L 9939648 9939677 -14603880 + AT_rich Low_complexity Low_complexity 1 29 0 3 660 218 191 0 0 chr3L 9940298 9940340 -14603217 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 660 31 0 0 0 chr3L 9941243 9941274 -14602283 + AT_rich Low_complexity Low_complexity 1 31 0 3 660 232 170 0 21 chr3L 9942483 9942531 -14601026 + (CAG)n Simple_repeat Simple_repeat 2 48 0 3 660 207 69 0 0 chr3L 9942986 9943015 -14600542 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 660 25 31 0 0 chr3L 9947371 9947403 -14596154 + AT_rich Low_complexity Low_complexity 1 32 0 3 660 21 0 0 0 chr3L 9950698 9950719 -14592838 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 248 286 0 0 chr3L 9951070 9951147 -14592410 + T-rich Low_complexity Low_complexity 3 79 0 3 660 28 29 0 0 chr3L 9951297 9951332 -14592225 + AT_rich Low_complexity Low_complexity 1 35 0 3 660 192 77 0 0 chr3L 9951416 9951442 -14592115 + (CTA)n Simple_repeat Simple_repeat 1 26 0 3 660 26 0 0 0 chr3L 9951791 9951817 -14591740 + AT_rich Low_complexity Low_complexity 1 26 0 3 660 219 36 0 0 chr3L 9952779 9952807 -14590750 + (TTA)n Simple_repeat Simple_repeat 2 29 0 3 660 235 26 0 71 chr3L 9953483 9953525 -14590032 + (CTATA)n Simple_repeat Simple_repeat 4 42 0 3 660 264 77 0 0 chr3L 9953665 9953704 -14589853 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 660 189 74 0 0 chr3L 9953928 9953955 -14589602 + (TAAAAA)n Simple_repeat Simple_repeat 5 31 0 3 660 255 167 0 0 chr3L 9954423 9954489 -14589068 + (TTTG)n Simple_repeat Simple_repeat 3 68 0 3 660 21 0 0 0 chr3L 9954594 9954615 -14588942 + AT_rich Low_complexity Low_complexity 1 21 0 3 660 192 152 0 0 chr3L 9956770 9956803 -14586754 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 660 192 158 0 0 chr3L 9957497 9957535 -14586022 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 3 660 201 231 0 0 chr3L 9957871 9957910 -14585647 + (CAA)n Simple_repeat Simple_repeat 2 40 0 3 660 21 36 0 0 chr3L 9958434 9958462 -14585095 + AT_rich Low_complexity Low_complexity 1 28 0 3 660 260 209 31 52 chr3L 9959709 9959805 -14583752 + A-rich Low_complexity Low_complexity 3 96 0 3 661 21 0 0 0 chr3L 9968790 9968811 -14574746 + AT_rich Low_complexity Low_complexity 1 21 0 3 661 206 118 0 0 chr3L 9971812 9971846 -14571711 + (A)n Simple_repeat Simple_repeat 1 34 0 3 661 216 111 0 0 chr3L 9972938 9972974 -14570583 + (A)n Simple_repeat Simple_repeat 1 36 0 3 661 27 29 0 0 chr3L 9974365 9974399 -14569158 + AT_rich Low_complexity Low_complexity 1 34 0 3 661 24 0 0 0 chr3L 9975486 9975510 -14568047 + AT_rich Low_complexity Low_complexity 1 24 0 3 661 23 54 0 0 chr3L 9977060 9977097 -14566460 + AT_rich Low_complexity Low_complexity 1 37 0 3 661 189 159 0 0 chr3L 9977781 9977825 -14565732 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 661 26 64 0 0 chr3L 9980587 9980634 -14562923 + AT_rich Low_complexity Low_complexity 1 47 0 3 661 24 0 0 0 chr3L 9980668 9980692 -14562865 + AT_rich Low_complexity Low_complexity 1 24 0 3 661 195 188 0 0 chr3L 9981355 9981403 -14562154 + (TCTG)n Simple_repeat Simple_repeat 4 51 0 3 661 183 80 0 0 chr3L 9989717 9989742 -14553815 + (G)n Simple_repeat Simple_repeat 1 25 0 3 661 228 143 0 0 chr3L 9991201 9991243 -14552314 + (ATG)n Simple_repeat Simple_repeat 2 43 0 3 661 40 0 0 0 chr3L 9991897 9991937 -14551620 + AT_rich Low_complexity Low_complexity 1 40 0 3 661 22 0 0 0 chr3L 9994641 9994663 -14548894 + AT_rich Low_complexity Low_complexity 1 22 0 3 661 191 36 0 35 chr3L 9997048 9997077 -14546480 + (CCG)n Simple_repeat Simple_repeat 2 29 0 3 661 224 140 40 0 chr3L 10005525 10005575 -14537982 + (TCTCTG)n Simple_repeat Simple_repeat 5 56 0 3 661 204 40 0 0 chr3L 10007114 10007139 -14536418 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 661 209 217 0 21 chr3L 10008825 10008872 -14534685 + (TATG)n Simple_repeat Simple_repeat 1 46 0 3 661 28 29 0 0 chr3L 10009328 10009363 -14534194 + AT_rich Low_complexity Low_complexity 1 35 0 3 661 228 86 0 0 chr3L 10009573 10009608 -14533949 + (CTG)n Simple_repeat Simple_repeat 2 36 0 3 661 216 0 0 0 chr3L 10014976 10015000 -14528557 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 661 36 0 0 0 chr3L 10016471 10016507 -14527050 + AT_rich Low_complexity Low_complexity 1 36 0 3 661 219 36 0 0 chr3L 10017156 10017184 -14526373 + (CAGC)n Simple_repeat Simple_repeat 4 31 0 3 661 318 80 0 0 chr3L 10021460 10021510 -14522047 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 661 231 88 0 0 chr3L 10021721 10021755 -14521802 + (CAA)n Simple_repeat Simple_repeat 2 35 0 3 661 27 29 0 0 chr3L 10025047 10025081 -14518476 + AT_rich Low_complexity Low_complexity 1 34 0 3 661 204 154 0 25 chr3L 10025114 10025154 -14518403 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 661 22 35 0 0 chr3L 10026624 10026653 -14516904 + AT_rich Low_complexity Low_complexity 1 29 0 3 661 21 0 0 0 chr3L 10026875 10026896 -14516661 + AT_rich Low_complexity Low_complexity 1 21 0 3 661 219 88 0 0 chr3L 10027939 10027973 -14515584 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 661 25 31 0 0 chr3L 10042045 10042077 -14501480 + AT_rich Low_complexity Low_complexity 1 32 0 3 661 29 0 0 0 chr3L 10045481 10045510 -14498047 + AT_rich Low_complexity Low_complexity 1 29 0 3 661 195 146 0 0 chr3L 10045742 10045783 -14497774 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 661 234 143 0 0 chr3L 10047243 10047292 -14496265 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 661 24 53 0 0 chr3L 10047771 10047809 -14495748 + AT_rich Low_complexity Low_complexity 1 38 0 3 661 21 0 0 0 chr3L 10050109 10050130 -14493427 + AT_rich Low_complexity Low_complexity 1 21 0 3 661 300 143 0 0 chr3L 10050632 10050688 -14492869 + (CAGT)n Simple_repeat Simple_repeat 4 59 0 3 661 21 0 0 0 chr3L 10051026 10051047 -14492510 + AT_rich Low_complexity Low_complexity 1 21 0 3 661 25 0 0 0 chr3L 10051886 10051911 -14491646 + AT_rich Low_complexity Low_complexity 1 25 0 3 661 270 81 0 0 chr3L 10052180 10052217 -14491340 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 661 231 125 0 0 chr3L 10052396 10052436 -14491121 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 661 4584 8 0 0 chr3L 10053269 10053776 -14489781 - DM176_LTR LTR Gypsy 0 507 1 3 661 40763 16 1 9 chr3L 10053779 10060279 -14483278 - DM176_I LTR Gypsy -1 6166 1 3 661 4283 8 0 0 chr3L 10060279 10060786 -14482771 - DM176_LTR LTR Gypsy 0 507 1 3 661 222 274 0 0 chr3L 10064880 10064931 -14478626 + (CACCAT)n Simple_repeat Simple_repeat 3 53 0 3 661 195 129 0 0 chr3L 10065004 10065035 -14478522 + (CAA)n Simple_repeat Simple_repeat 1 31 0 3 661 23 0 0 0 chr3L 10065550 10065573 -14477984 + AT_rich Low_complexity Low_complexity 1 23 0 3 661 25 51 0 0 chr3L 10066323 10066362 -14477195 + AT_rich Low_complexity Low_complexity 1 39 0 3 661 234 62 0 0 chr3L 10067086 10067118 -14476439 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 661 26 0 0 0 chr3L 10067549 10067575 -14475982 + AT_rich Low_complexity Low_complexity 1 26 0 3 661 23 0 0 0 chr3L 10069663 10069686 -14473871 + AT_rich Low_complexity Low_complexity 1 23 0 3 661 186 71 0 0 chr3L 10073563 10073591 -14469966 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 661 215 125 25 0 chr3L 10075065 10075105 -14468452 + (TATG)n Simple_repeat Simple_repeat 4 44 0 3 661 185 108 27 0 chr3L 10078588 10078625 -14464932 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 3 661 21 0 0 0 chr3L 10079755 10079776 -14463781 + AT_rich Low_complexity Low_complexity 1 21 0 3 661 21 0 0 0 chr3L 10080165 10080186 -14463371 + AT_rich Low_complexity Low_complexity 1 21 0 3 661 23 0 0 0 chr3L 10082639 10082662 -14460895 + AT_rich Low_complexity Low_complexity 1 23 0 3 661 25 31 0 0 chr3L 10082921 10082953 -14460604 + AT_rich Low_complexity Low_complexity 1 32 0 3 661 23 33 0 0 chr3L 10088801 10088831 -14454726 + AT_rich Low_complexity Low_complexity 1 30 0 3 661 229 67 0 0 chr3L 10090428 10090458 -14453099 + DNAREP1_DM LINE Penelope 409 438 -156 3 661 21 0 0 0 chr3L 10090530 10090551 -14453006 + AT_rich Low_complexity Low_complexity 1 21 0 3 661 22 0 0 0 chr3L 10091626 10091648 -14451909 + AT_rich Low_complexity Low_complexity 1 22 0 3 662 29 60 0 0 chr3L 10094526 10094576 -14448981 + AT_rich Low_complexity Low_complexity 1 50 0 3 662 21 0 0 0 chr3L 10095368 10095389 -14448168 + AT_rich Low_complexity Low_complexity 1 21 0 3 662 227 182 0 0 chr3L 10097850 10097894 -14445663 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 662 22 35 0 0 chr3L 10098619 10098648 -14444909 + AT_rich Low_complexity Low_complexity 1 29 0 3 662 38 51 0 0 chr3L 10099421 10099480 -14444077 + AT_rich Low_complexity Low_complexity 1 59 0 3 662 46 45 0 0 chr3L 10099552 10099619 -14443938 + AT_rich Low_complexity Low_complexity 1 67 0 3 662 22 0 0 0 chr3L 10101802 10101824 -14441733 + AT_rich Low_complexity Low_complexity 1 22 0 3 662 22 35 0 0 chr3L 10103186 10103215 -14440342 + AT_rich Low_complexity Low_complexity 1 29 0 3 662 26 30 0 0 chr3L 10103729 10103762 -14439795 + AT_rich Low_complexity Low_complexity 1 33 0 3 662 28 0 0 0 chr3L 10104456 10104484 -14439073 + AT_rich Low_complexity Low_complexity 1 28 0 3 662 23 0 0 0 chr3L 10106256 10106279 -14437278 + AT_rich Low_complexity Low_complexity 1 23 0 3 662 21 0 0 0 chr3L 10106364 10106385 -14437172 + AT_rich Low_complexity Low_complexity 1 21 0 3 662 204 40 0 0 chr3L 10106965 10106990 -14436567 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 662 183 162 0 0 chr3L 10107607 10107644 -14435913 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 662 243 88 0 0 chr3L 10108305 10108339 -14435218 + (GAGTG)n Simple_repeat Simple_repeat 5 38 0 3 662 39 0 0 0 chr3L 10111660 10111699 -14431858 + AT_rich Low_complexity Low_complexity 1 39 0 3 662 23 33 0 0 chr3L 10116435 10116465 -14427092 + AT_rich Low_complexity Low_complexity 1 30 0 3 662 22 56 0 0 chr3L 10118087 10118123 -14425434 + AT_rich Low_complexity Low_complexity 1 36 0 3 662 243 61 0 0 chr3L 10119395 10119428 -14424129 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 662 200 170 38 0 chr3L 10123266 10123319 -14420238 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 662 26 50 0 0 chr3L 10123793 10123833 -14419724 + AT_rich Low_complexity Low_complexity 1 40 0 3 662 21 0 0 0 chr3L 10124796 10124817 -14418740 + AT_rich Low_complexity Low_complexity 1 21 0 3 662 25 51 0 0 chr3L 10128476 10128515 -14415042 + AT_rich Low_complexity Low_complexity 1 39 0 3 662 25 0 0 0 chr3L 10128524 10128549 -14415008 + AT_rich Low_complexity Low_complexity 1 25 0 3 662 22 0 0 0 chr3L 10133652 10133674 -14409883 + AT_rich Low_complexity Low_complexity 1 22 0 3 662 207 0 0 0 chr3L 10136302 10136325 -14407232 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 662 23 78 0 0 chr3L 10137132 10137183 -14406374 + AT_rich Low_complexity Low_complexity 1 51 0 3 662 210 128 0 0 chr3L 10137344 10137383 -14406174 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 662 210 91 0 0 chr3L 10139126 10139159 -14404398 + (T)n Simple_repeat Simple_repeat 1 33 0 3 662 203 250 0 0 chr3L 10140916 10140964 -14402593 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 3 662 21 0 0 0 chr3L 10146540 10146561 -14396996 + AT_rich Low_complexity Low_complexity 1 21 0 3 662 210 254 0 0 chr3L 10146900 10146959 -14396598 + A-rich Low_complexity Low_complexity 2 60 0 3 662 21 57 0 0 chr3L 10160999 10161034 -14382523 + AT_rich Low_complexity Low_complexity 1 35 0 3 662 24 0 0 0 chr3L 10168082 10168106 -14375451 + AT_rich Low_complexity Low_complexity 1 24 0 3 662 21 36 0 0 chr3L 10168585 10168613 -14374944 + AT_rich Low_complexity Low_complexity 1 28 0 3 662 185 0 40 0 chr3L 10172074 10172099 -14371458 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 662 207 0 0 0 chr3L 10173252 10173275 -14370282 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 662 211 296 19 38 chr3L 10173624 10173782 -14369775 + A-rich Low_complexity Low_complexity 5 159 0 3 662 23 0 0 0 chr3L 10174925 10174948 -14368609 + AT_rich Low_complexity Low_complexity 1 23 0 3 662 195 129 0 0 chr3L 10175977 10176008 -14367549 + (CTG)n Simple_repeat Simple_repeat 2 32 0 3 662 23 68 0 0 chr3L 10177178 10177222 -14366335 + AT_rich Low_complexity Low_complexity 1 44 0 3 662 23 33 0 0 chr3L 10177356 10177386 -14366171 + AT_rich Low_complexity Low_complexity 1 30 0 3 662 204 125 0 0 chr3L 10179048 10179080 -14364477 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 662 29 47 0 0 chr3L 10179966 10180009 -14363548 + AT_rich Low_complexity Low_complexity 1 43 0 3 662 29 28 0 0 chr3L 10182099 10182135 -14361422 + AT_rich Low_complexity Low_complexity 1 36 0 3 662 197 132 0 26 chr3L 10183413 10183452 -14360105 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 3 662 266 0 29 0 chr3L 10186577 10186611 -14356946 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 3 662 202 279 0 14 chr3L 10187165 10187234 -14356323 + GA-rich Low_complexity Low_complexity 1 68 0 3 662 231 277 11 11 chr3L 10187267 10187362 -14356195 + CT-rich Low_complexity Low_complexity 2 96 0 3 662 210 182 14 43 chr3L 10187810 10187879 -14355678 + (TTG)n Simple_repeat Simple_repeat 2 68 0 3 662 228 167 0 0 chr3L 10188036 10188084 -14355473 + (TCG)n Simple_repeat Simple_repeat 2 49 0 3 662 264 188 0 0 chr3L 10188122 10188186 -14355371 + (CAT)n Simple_repeat Simple_repeat 1 64 0 3 662 302 278 12 24 chr3L 10188286 10188452 -14355105 + (TTG)n Simple_repeat Simple_repeat 2 165 0 3 662 203 179 0 0 chr3L 10188949 10188988 -14354569 + (CAT)n Simple_repeat Simple_repeat 2 40 0 3 662 207 200 0 0 chr3L 10189027 10189072 -14354485 + (CAT)n Simple_repeat Simple_repeat 2 46 0 3 662 231 146 0 0 chr3L 10189342 10189383 -14354174 + (CAT)n Simple_repeat Simple_repeat 3 43 0 3 662 263 303 0 0 chr3L 10189914 10189990 -14353567 + (CAG)n Simple_repeat Simple_repeat 2 77 0 3 662 319 211 0 32 chr3L 10190260 10190353 -14353204 - ROO_I LTR Pao -7526 730 641 3 662 251 47 0 65 chr3L 10191566 10191612 -14351945 + (TTC)n Simple_repeat Simple_repeat 2 44 0 3 662 251 114 0 22 chr3L 10193404 10193449 -14350108 + (GTTTG)n Simple_repeat Simple_repeat 1 44 0 3 662 240 59 0 0 chr3L 10194790 10194824 -14348733 + (ATTCG)n Simple_repeat Simple_repeat 4 37 0 3 662 235 233 0 0 chr3L 10196433 10196493 -14347064 + A-rich Low_complexity Low_complexity 1 60 0 3 662 21 0 0 0 chr3L 10197236 10197257 -14346300 + AT_rich Low_complexity Low_complexity 1 21 0 3 662 33 25 0 0 chr3L 10198604 10198644 -14344913 + AT_rich Low_complexity Low_complexity 1 40 0 3 662 189 121 0 0 chr3L 10203514 10203547 -14340010 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 662 198 0 0 0 chr3L 10208262 10208284 -14335273 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 662 30 27 0 0 chr3L 10218476 10218513 -14325044 + AT_rich Low_complexity Low_complexity 1 37 0 3 662 29 60 0 0 chr3L 10218772 10218822 -14324735 + AT_rich Low_complexity Low_complexity 1 50 0 3 662 22 0 0 0 chr3L 10219789 10219811 -14323746 + AT_rich Low_complexity Low_complexity 1 22 0 3 662 21 36 0 0 chr3L 10223218 10223246 -14320311 + AT_rich Low_complexity Low_complexity 1 28 0 3 663 21 82 0 0 chr3L 10224844 10224893 -14318664 + AT_rich Low_complexity Low_complexity 1 49 0 3 663 22 56 0 0 chr3L 10226740 10226776 -14316781 + AT_rich Low_complexity Low_complexity 1 36 0 3 663 225 65 0 0 chr3L 10228769 10228800 -14314757 + (T)n Simple_repeat Simple_repeat 1 31 0 3 663 25 31 0 0 chr3L 10231743 10231775 -14311782 + AT_rich Low_complexity Low_complexity 1 32 0 3 663 22 70 0 0 chr3L 10233369 10233412 -14310145 + AT_rich Low_complexity Low_complexity 1 43 0 3 663 24 0 0 0 chr3L 10234238 10234262 -14309295 + AT_rich Low_complexity Low_complexity 1 24 0 3 663 255 61 0 0 chr3L 10234982 10235015 -14308542 + (ATG)n Simple_repeat Simple_repeat 3 35 0 3 663 42 57 0 0 chr3L 10235451 10235521 -14308036 + AT_rich Low_complexity Low_complexity 1 70 0 3 663 21 0 0 0 chr3L 10236702 10236723 -14306834 + AT_rich Low_complexity Low_complexity 1 21 0 3 663 31 0 0 0 chr3L 10238205 10238236 -14305321 + AT_rich Low_complexity Low_complexity 1 31 0 3 663 35 0 0 0 chr3L 10239226 10239261 -14304296 + AT_rich Low_complexity Low_complexity 1 35 0 3 663 24 0 0 0 chr3L 10239910 10239934 -14303623 + AT_rich Low_complexity Low_complexity 1 24 0 3 663 21 36 0 0 chr3L 10245836 10245864 -14297693 + AT_rich Low_complexity Low_complexity 1 28 0 3 663 27 49 0 0 chr3L 10245953 10245994 -14297563 + AT_rich Low_complexity Low_complexity 1 41 0 3 663 24 0 0 0 chr3L 10247065 10247089 -14296468 + AT_rich Low_complexity Low_complexity 1 24 0 3 663 192 40 0 0 chr3L 10247550 10247575 -14295982 + (GA)n Simple_repeat Simple_repeat 1 25 0 3 663 180 0 0 0 chr3L 10247800 10247820 -14295737 + (A)n Simple_repeat Simple_repeat 1 20 0 3 663 22 0 0 0 chr3L 10249447 10249469 -14294088 + AT_rich Low_complexity Low_complexity 1 22 0 3 663 21 71 0 0 chr3L 10260389 10260431 -14283126 + AT_rich Low_complexity Low_complexity 1 42 0 3 663 23 0 0 0 chr3L 10261279 10261302 -14282255 + AT_rich Low_complexity Low_complexity 1 23 0 3 663 21 0 0 0 chr3L 10264759 10264780 -14278777 + AT_rich Low_complexity Low_complexity 1 21 0 3 663 204 217 0 0 chr3L 10264987 10265033 -14278524 + GA-rich Low_complexity Low_complexity 1 46 0 3 663 201 219 15 45 chr3L 10265385 10265452 -14278105 + A-rich Low_complexity Low_complexity 2 66 0 3 663 29 0 0 0 chr3L 10265856 10265885 -14277672 + AT_rich Low_complexity Low_complexity 1 29 0 3 663 25 0 0 0 chr3L 10268946 10268971 -14274586 + AT_rich Low_complexity Low_complexity 1 25 0 3 663 188 86 0 28 chr3L 10270344 10270380 -14273177 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 663 21 0 0 0 chr3L 10271260 10271281 -14272276 + AT_rich Low_complexity Low_complexity 1 21 0 3 663 33 25 0 0 chr3L 10273123 10273163 -14270394 + AT_rich Low_complexity Low_complexity 1 40 0 3 663 21 0 0 0 chr3L 10278300 10278321 -14265236 + AT_rich Low_complexity Low_complexity 1 21 0 3 663 29 0 0 0 chr3L 10278509 10278538 -14265019 + AT_rich Low_complexity Low_complexity 1 29 0 3 663 213 39 0 0 chr3L 10278562 10278588 -14264969 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 663 35 0 0 0 chr3L 10280015 10280050 -14263507 + AT_rich Low_complexity Low_complexity 1 35 0 3 663 203 250 0 0 chr3L 10280652 10280704 -14262853 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 663 30 69 0 0 chr3L 10281024 10281082 -14262475 + AT_rich Low_complexity Low_complexity 1 58 0 3 663 24 0 0 0 chr3L 10281897 10281921 -14261636 + AT_rich Low_complexity Low_complexity 1 24 0 3 663 33 80 0 0 chr3L 10282956 10283031 -14260526 + AT_rich Low_complexity Low_complexity 1 75 0 3 663 226 204 0 0 chr3L 10284508 10284552 -14259005 + (CAG)n Simple_repeat Simple_repeat 3 46 0 3 663 21 71 0 0 chr3L 10285212 10285254 -14258303 + AT_rich Low_complexity Low_complexity 1 42 0 3 663 35 54 0 0 chr3L 10285850 10285906 -14257651 + AT_rich Low_complexity Low_complexity 1 56 0 3 663 24 0 0 0 chr3L 10286323 10286347 -14257210 + AT_rich Low_complexity Low_complexity 1 24 0 3 663 276 100 0 0 chr3L 10286848 10286888 -14256669 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 663 228 237 0 0 chr3L 10287265 10287324 -14256233 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 663 264 30 0 0 chr3L 10292195 10292228 -14251329 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 663 28 29 0 0 chr3L 10293263 10293298 -14250259 + AT_rich Low_complexity Low_complexity 1 35 0 3 663 21 57 0 0 chr3L 10294456 10294491 -14249066 + AT_rich Low_complexity Low_complexity 1 35 0 3 663 24 32 0 0 chr3L 10295791 10295822 -14247735 + AT_rich Low_complexity Low_complexity 1 31 0 3 663 231 270 0 13 chr3L 10296074 10296149 -14247408 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 663 22 0 0 0 chr3L 10296944 10296966 -14246591 + AT_rich Low_complexity Low_complexity 1 22 0 3 663 214 95 0 45 chr3L 10297029 10297073 -14246484 + (CAA)n Simple_repeat Simple_repeat 3 44 0 3 663 198 71 0 0 chr3L 10297446 10297474 -14246083 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 663 246 105 0 0 chr3L 10297752 10297790 -14245767 + (CAG)n Simple_repeat Simple_repeat 1 38 0 3 663 195 69 0 0 chr3L 10301289 10301318 -14242239 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 663 27 29 0 0 chr3L 10302292 10302326 -14241231 + AT_rich Low_complexity Low_complexity 1 34 0 3 663 180 77 0 0 chr3L 10303874 10303900 -14239657 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 3 663 249 146 0 0 chr3L 10306688 10306736 -14236821 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 663 22 56 0 0 chr3L 10307845 10307881 -14235676 + AT_rich Low_complexity Low_complexity 1 36 0 3 663 207 200 0 0 chr3L 10309796 10309841 -14233716 + A-rich Low_complexity Low_complexity 1 45 0 3 663 30 0 0 0 chr3L 10313026 10313056 -14230501 + AT_rich Low_complexity Low_complexity 1 30 0 3 663 27 73 0 0 chr3L 10313716 10313771 -14229786 + AT_rich Low_complexity Low_complexity 1 55 0 3 663 21 36 0 0 chr3L 10317737 10317765 -14225792 + AT_rich Low_complexity Low_complexity 1 28 0 3 663 22 56 0 0 chr3L 10317811 10317847 -14225710 + AT_rich Low_complexity Low_complexity 1 36 0 3 663 255 146 0 0 chr3L 10318763 10318818 -14224739 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 663 252 0 0 0 chr3L 10320232 10320260 -14223297 + (CAGC)n Simple_repeat Simple_repeat 4 31 0 3 663 68 42 0 0 chr3L 10320861 10320957 -14222600 + AT_rich Low_complexity Low_complexity 1 96 0 3 663 26 0 0 0 chr3L 10321019 10321045 -14222512 + AT_rich Low_complexity Low_complexity 1 26 0 3 663 551 62 12 0 chr3L 10321250 10321330 -14222227 + (TA)n Simple_repeat Simple_repeat 1 81 0 3 663 211 244 0 0 chr3L 10322276 10322321 -14221236 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 663 24 32 0 0 chr3L 10323320 10323351 -14220206 + AT_rich Low_complexity Low_complexity 1 31 0 3 663 25 31 0 0 chr3L 10327786 10327818 -14215739 + AT_rich Low_complexity Low_complexity 1 32 0 3 663 207 250 0 0 chr3L 10329014 10329066 -14214491 + (GCTG)n Simple_repeat Simple_repeat 4 55 0 3 663 28 29 0 0 chr3L 10329232 10329267 -14214290 + AT_rich Low_complexity Low_complexity 1 35 0 3 663 222 143 0 0 chr3L 10331706 10331755 -14211802 + (A)n Simple_repeat Simple_repeat 1 49 0 3 663 29 0 0 0 chr3L 10332577 10332606 -14210951 + AT_rich Low_complexity Low_complexity 1 29 0 3 663 234 62 0 0 chr3L 10334189 10334221 -14209336 + (A)n Simple_repeat Simple_repeat 1 32 0 3 663 180 0 0 0 chr3L 10335519 10335539 -14208018 + (T)n Simple_repeat Simple_repeat 1 20 0 3 663 21 0 0 0 chr3L 10336721 10336742 -14206815 + AT_rich Low_complexity Low_complexity 1 21 0 3 663 23 78 0 0 chr3L 10337367 10337418 -14206139 + AT_rich Low_complexity Low_complexity 1 51 0 3 663 213 39 0 0 chr3L 10339309 10339335 -14204222 + (CAT)n Simple_repeat Simple_repeat 3 28 0 3 663 222 136 0 0 chr3L 10341366 10341410 -14202147 + (CAGGC)n Simple_repeat Simple_repeat 2 45 0 3 663 279 114 0 0 chr3L 10343265 10343309 -14200248 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 663 208 158 26 0 chr3L 10344290 10344328 -14199229 + (CAGTC)n Simple_repeat Simple_repeat 4 42 0 3 663 24 32 0 0 chr3L 10345198 10345229 -14198328 + AT_rich Low_complexity Low_complexity 1 31 0 3 663 210 128 0 0 chr3L 10345394 10345433 -14198124 + (T)n Simple_repeat Simple_repeat 1 39 0 3 663 27 0 0 0 chr3L 10346000 10346027 -14197530 + AT_rich Low_complexity Low_complexity 1 27 0 3 663 21 0 0 0 chr3L 10346658 10346679 -14196878 + AT_rich Low_complexity Low_complexity 1 21 0 3 663 22 0 0 0 chr3L 10347827 10347849 -14195708 + AT_rich Low_complexity Low_complexity 1 22 0 3 663 216 0 0 0 chr3L 10347906 10347930 -14195627 + (CTG)n Simple_repeat Simple_repeat 2 25 0 3 663 25 0 0 0 chr3L 10348157 10348182 -14195375 + AT_rich Low_complexity Low_complexity 1 25 0 3 663 210 259 0 0 chr3L 10349484 10349538 -14194019 + (CAA)n Simple_repeat Simple_repeat 1 54 0 3 663 34 24 0 0 chr3L 10349823 10349864 -14193693 + AT_rich Low_complexity Low_complexity 1 41 0 3 663 26 50 0 0 chr3L 10349908 10349948 -14193609 + AT_rich Low_complexity Low_complexity 1 40 0 3 663 22 56 0 0 chr3L 10350332 10350368 -14193189 + AT_rich Low_complexity Low_complexity 1 36 0 3 663 285 29 0 0 chr3L 10351109 10351143 -14192414 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 663 183 42 0 0 chr3L 10353480 10353504 -14190053 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 663 201 156 0 0 chr3L 10353562 10353594 -14189963 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 664 30 0 0 0 chr3L 10355052 10355082 -14188475 + AT_rich Low_complexity Low_complexity 1 30 0 3 664 183 129 0 0 chr3L 10356618 10356649 -14186908 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3 664 23 33 0 0 chr3L 10356760 10356790 -14186767 + AT_rich Low_complexity Low_complexity 1 30 0 3 664 189 74 0 0 chr3L 10358178 10358205 -14185352 + (A)n Simple_repeat Simple_repeat 1 27 0 3 664 22 35 0 0 chr3L 10358683 10358712 -14184845 + AT_rich Low_complexity Low_complexity 1 29 0 3 664 23 0 0 0 chr3L 10359849 10359872 -14183685 + AT_rich Low_complexity Low_complexity 1 23 0 3 664 22 70 0 0 chr3L 10360626 10360669 -14182888 + AT_rich Low_complexity Low_complexity 1 43 0 3 664 267 31 0 0 chr3L 10361354 10361386 -14182171 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 664 21 0 0 0 chr3L 10362804 10362825 -14180732 + AT_rich Low_complexity Low_complexity 1 21 0 3 664 22 0 0 0 chr3L 10363238 10363260 -14180297 + AT_rich Low_complexity Low_complexity 1 22 0 3 664 213 108 0 0 chr3L 10363613 10363650 -14179907 + (GATTG)n Simple_repeat Simple_repeat 5 41 0 3 664 195 139 0 0 chr3L 10363711 10363747 -14179810 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 3 664 21 0 0 0 chr3L 10364115 10364136 -14179421 + AT_rich Low_complexity Low_complexity 1 21 0 3 664 26 64 0 0 chr3L 10365696 10365743 -14177814 + AT_rich Low_complexity Low_complexity 1 47 0 3 664 22 70 0 0 chr3L 10366788 10366831 -14176726 + AT_rich Low_complexity Low_complexity 1 43 0 3 664 28 48 0 0 chr3L 10367249 10367291 -14176266 + AT_rich Low_complexity Low_complexity 1 42 0 3 664 209 204 0 0 chr3L 10368383 10368432 -14175125 + T-rich Low_complexity Low_complexity 1 49 0 3 664 21 36 0 0 chr3L 10371341 10371369 -14172188 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 249 33 0 0 chr3L 10371645 10371675 -14171882 + (TATG)n Simple_repeat Simple_repeat 3 32 0 3 664 25 31 0 0 chr3L 10371900 10371932 -14171625 + AT_rich Low_complexity Low_complexity 1 32 0 3 664 25 0 0 0 chr3L 10372217 10372242 -14171315 + AT_rich Low_complexity Low_complexity 1 25 0 3 664 27 29 0 0 chr3L 10373106 10373140 -14170417 + AT_rich Low_complexity Low_complexity 1 34 0 3 664 23 33 0 0 chr3L 10376445 10376475 -14167082 + AT_rich Low_complexity Low_complexity 1 30 0 3 664 24 32 0 0 chr3L 10377556 10377587 -14165970 + AT_rich Low_complexity Low_complexity 1 31 0 3 664 26 50 0 0 chr3L 10377681 10377721 -14165836 + AT_rich Low_complexity Low_complexity 1 40 0 3 664 200 35 35 0 chr3L 10377932 10377961 -14165596 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 3 664 185 0 40 0 chr3L 10378225 10378250 -14165307 + (TATAA)n Simple_repeat Simple_repeat 1 26 0 3 664 210 105 0 0 chr3L 10378591 10378629 -14164928 + (T)n Simple_repeat Simple_repeat 1 38 0 3 664 323 137 0 14 chr3L 10378784 10378858 -14164699 + (TTG)n Simple_repeat Simple_repeat 1 73 0 3 664 225 163 0 0 chr3L 10379174 10379223 -14164334 + (CAA)n Simple_repeat Simple_repeat 1 49 0 3 664 213 81 0 51 chr3L 10379771 10379810 -14163747 + (CAATC)n Simple_repeat Simple_repeat 4 40 0 3 664 212 196 0 21 chr3L 10379857 10379904 -14163653 + A-rich Low_complexity Low_complexity 4 49 0 3 664 357 82 0 0 chr3L 10380063 10380112 -14163445 + (GCTG)n Simple_repeat Simple_repeat 1 49 0 3 664 21 36 0 0 chr3L 10380484 10380512 -14163045 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 237 270 54 0 chr3L 10381423 10381497 -14162060 + TART_B1 LINE telomeric 151 228 -10426 3 664 213 154 0 0 chr3L 10381820 10381859 -14161698 + (CTG)n Simple_repeat Simple_repeat 3 41 0 3 664 21 36 0 0 chr3L 10382011 10382039 -14161518 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 238 227 40 13 chr3L 10383216 10383292 -14160265 + (CTG)n Simple_repeat Simple_repeat 3 80 0 3 664 23 0 0 0 chr3L 10383450 10383473 -14160084 + AT_rich Low_complexity Low_complexity 1 23 0 3 664 209 196 0 21 chr3L 10384567 10384614 -14158943 + (CTG)n Simple_repeat Simple_repeat 3 48 0 3 664 180 125 0 0 chr3L 10386180 10386212 -14157345 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 664 29 28 0 0 chr3L 10386229 10386265 -14157292 + AT_rich Low_complexity Low_complexity 1 36 0 3 664 35 41 0 0 chr3L 10387317 10387366 -14156191 + AT_rich Low_complexity Low_complexity 1 49 0 3 664 21 36 0 0 chr3L 10389847 10389875 -14153682 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 195 42 0 0 chr3L 10390969 10390993 -14152564 + (T)n Simple_repeat Simple_repeat 1 24 0 3 664 33 25 0 0 chr3L 10392062 10392102 -14151455 + AT_rich Low_complexity Low_complexity 1 40 0 3 664 21 36 0 0 chr3L 10393377 10393405 -14150152 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 21 36 0 0 chr3L 10393840 10393868 -14149689 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 33 25 0 0 chr3L 10393957 10393997 -14149560 + AT_rich Low_complexity Low_complexity 1 40 0 3 664 21 0 0 0 chr3L 10396477 10396498 -14147059 + AT_rich Low_complexity Low_complexity 1 21 0 3 664 189 74 0 0 chr3L 10397517 10397544 -14146013 + (CAT)n Simple_repeat Simple_repeat 3 29 0 3 664 30 27 0 0 chr3L 10398109 10398146 -14145411 + AT_rich Low_complexity Low_complexity 1 37 0 3 664 219 69 0 0 chr3L 10398870 10398899 -14144658 + (GCTTG)n Simple_repeat Simple_repeat 4 32 0 3 664 245 75 25 0 chr3L 10399315 10399355 -14144202 + (ATG)n Simple_repeat Simple_repeat 1 41 0 3 664 218 185 37 0 chr3L 10400498 10400552 -14143005 + A-rich Low_complexity Low_complexity 5 60 0 3 664 225 0 0 0 chr3L 10402430 10402455 -14141102 + (T)n Simple_repeat Simple_repeat 1 25 0 3 664 26 30 0 0 chr3L 10403083 10403116 -14140441 + AT_rich Low_complexity Low_complexity 1 33 0 3 664 21 36 0 0 chr3L 10403284 10403312 -14140245 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 23 101 0 0 chr3L 10404981 10405060 -14138497 + AT_rich Low_complexity Low_complexity 1 79 0 3 664 19928 1 0 0 chr3L 10408100 10410405 -14133152 - DOC LINE Jockey 0 4725 2422 3 664 237 182 0 0 chr3L 10411837 10411892 -14131665 + (TTGG)n Simple_repeat Simple_repeat 3 57 0 3 664 32 0 0 0 chr3L 10412396 10412428 -14131129 + AT_rich Low_complexity Low_complexity 1 32 0 3 664 26 0 0 0 chr3L 10412768 10412794 -14130763 + AT_rich Low_complexity Low_complexity 1 26 0 3 664 189 159 0 0 chr3L 10413302 10413346 -14130211 + A-rich Low_complexity Low_complexity 1 44 0 3 664 23 0 0 0 chr3L 10414387 10414410 -14129147 + AT_rich Low_complexity Low_complexity 1 23 0 3 664 205 86 0 28 chr3L 10414806 10414842 -14128715 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 3 664 234 0 0 0 chr3L 10414971 10414997 -14128560 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 664 23 33 0 0 chr3L 10420080 10420110 -14123447 + AT_rich Low_complexity Low_complexity 1 30 0 3 664 22 0 0 0 chr3L 10420338 10420360 -14123197 + AT_rich Low_complexity Low_complexity 1 22 0 3 664 22 0 0 0 chr3L 10421435 10421457 -14122100 + AT_rich Low_complexity Low_complexity 1 22 0 3 664 185 215 0 41 chr3L 10422338 10422435 -14121122 + (CAA)n Simple_repeat Simple_repeat 3 95 0 3 664 27 0 0 0 chr3L 10429145 10429172 -14114385 + AT_rich Low_complexity Low_complexity 1 27 0 3 664 44 46 0 0 chr3L 10430019 10430084 -14113473 + AT_rich Low_complexity Low_complexity 1 65 0 3 664 21 36 0 0 chr3L 10430972 10431000 -14112557 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 209 216 0 0 chr3L 10431344 10431381 -14112176 + (TTG)n Simple_repeat Simple_repeat 3 39 0 3 664 187 115 58 0 chr3L 10431793 10431845 -14111712 + T-rich Low_complexity Low_complexity 6 60 0 3 664 382 92 0 38 chr3L 10432365 10432444 -14111113 - DNAREP1_DM LINE Penelope -322 272 197 3 664 21 0 0 0 chr3L 10432503 10432524 -14111033 + AT_rich Low_complexity Low_complexity 1 21 0 3 664 29 0 0 0 chr3L 10432789 10432818 -14110739 + AT_rich Low_complexity Low_complexity 1 29 0 3 664 23 0 0 0 chr3L 10433666 10433689 -14109868 + AT_rich Low_complexity Low_complexity 1 23 0 3 664 25 31 0 0 chr3L 10434639 10434671 -14108886 + AT_rich Low_complexity Low_complexity 1 32 0 3 664 207 200 0 0 chr3L 10435074 10435119 -14108438 + A-rich Low_complexity Low_complexity 1 45 0 3 664 25 51 0 0 chr3L 10436128 10436167 -14107390 + AT_rich Low_complexity Low_complexity 1 39 0 3 664 21 0 0 0 chr3L 10436931 10436952 -14106605 + AT_rich Low_complexity Low_complexity 1 21 0 3 664 198 191 0 0 chr3L 10437482 10437524 -14106033 + (CAA)n Simple_repeat Simple_repeat 2 43 0 3 664 24 32 0 0 chr3L 10438868 10438899 -14104658 + AT_rich Low_complexity Low_complexity 1 31 0 3 664 220 188 0 45 chr3L 10439137 10439204 -14104353 + A-rich Low_complexity Low_complexity 2 65 0 3 664 34 24 0 0 chr3L 10439679 10439720 -14103837 + AT_rich Low_complexity Low_complexity 1 41 0 3 664 213 39 0 0 chr3L 10440012 10440038 -14103519 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 664 21 36 0 0 chr3L 10440420 10440448 -14103109 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 206 261 43 0 chr3L 10440704 10440773 -14102784 + (ATTCG)n Simple_repeat Simple_repeat 5 76 0 3 664 21 36 0 0 chr3L 10441317 10441345 -14102212 + AT_rich Low_complexity Low_complexity 1 28 0 3 664 26 30 0 0 chr3L 10444292 10444325 -14099232 + AT_rich Low_complexity Low_complexity 1 33 0 3 664 32 0 0 0 chr3L 10445625 10445657 -14097900 + AT_rich Low_complexity Low_complexity 1 32 0 3 664 22 0 0 0 chr3L 10446786 10446808 -14096749 + AT_rich Low_complexity Low_complexity 1 22 0 3 664 195 114 0 0 chr3L 10447216 10447251 -14096306 + (CAA)n Simple_repeat Simple_repeat 2 36 0 3 664 26 0 0 0 chr3L 10447896 10447922 -14095635 + AT_rich Low_complexity Low_complexity 1 26 0 3 664 23 0 0 0 chr3L 10448644 10448667 -14094890 + AT_rich Low_complexity Low_complexity 1 23 0 3 664 180 243 0 0 chr3L 10449491 10449565 -14093992 + (CTG)n Simple_repeat Simple_repeat 1 74 0 3 664 286 299 0 0 chr3L 10450639 10450756 -14092801 + T-rich Low_complexity Low_complexity 1 117 0 3 664 23 33 0 0 chr3L 10452076 10452106 -14091451 + AT_rich Low_complexity Low_complexity 1 30 0 3 664 23 33 0 0 chr3L 10452220 10452250 -14091307 + AT_rich Low_complexity Low_complexity 1 30 0 3 664 213 39 0 0 chr3L 10453522 10453548 -14090009 + (TCC)n Simple_repeat Simple_repeat 2 27 0 3 664 22 0 0 0 chr3L 10456760 10456782 -14086775 + AT_rich Low_complexity Low_complexity 1 22 0 3 664 26 50 0 0 chr3L 10456843 10456883 -14086674 + AT_rich Low_complexity Low_complexity 1 40 0 3 664 23 0 0 0 chr3L 10457656 10457679 -14085878 + AT_rich Low_complexity Low_complexity 1 23 0 3 664 305 190 62 12 chr3L 10458784 10458864 -14084693 - DNAREP1_DM LINE Penelope -10 584 501 3 664 21 71 0 0 chr3L 10458957 10458999 -14084558 + AT_rich Low_complexity Low_complexity 1 42 0 3 664 21 0 0 0 chr3L 10465138 10465159 -14078398 + AT_rich Low_complexity Low_complexity 1 21 0 3 664 29 0 0 0 chr3L 10466309 10466338 -14077219 + AT_rich Low_complexity Low_complexity 1 29 0 3 664 234 0 0 0 chr3L 10467011 10467037 -14076520 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 664 24 0 0 0 chr3L 10467503 10467527 -14076030 + AT_rich Low_complexity Low_complexity 1 24 0 3 664 207 0 0 0 chr3L 10468836 10468859 -14074698 + (ACTG)n Simple_repeat Simple_repeat 2 24 0 3 664 21 0 0 0 chr3L 10470804 10470825 -14072732 + AT_rich Low_complexity Low_complexity 1 21 0 3 664 22 35 0 0 chr3L 10473542 10473571 -14069986 + AT_rich Low_complexity Low_complexity 1 29 0 3 664 23 54 0 0 chr3L 10477412 10477449 -14066108 + AT_rich Low_complexity Low_complexity 1 37 0 3 664 27 49 0 0 chr3L 10481210 10481251 -14062306 + AT_rich Low_complexity Low_complexity 1 41 0 3 664 189 74 0 0 chr3L 10483476 10483503 -14060054 + (TTAG)n Simple_repeat Simple_repeat 2 28 0 3 665 21 36 0 0 chr3L 10489561 10489589 -14053968 + AT_rich Low_complexity Low_complexity 1 28 0 3 665 21 36 0 0 chr3L 10491538 10491566 -14051991 + AT_rich Low_complexity Low_complexity 1 28 0 3 665 22 70 0 0 chr3L 10493487 10493530 -14050027 + AT_rich Low_complexity Low_complexity 1 43 0 3 665 23 0 0 0 chr3L 10494664 10494687 -14048870 + AT_rich Low_complexity Low_complexity 1 23 0 3 665 33 0 0 0 chr3L 10495639 10495672 -14047885 + AT_rich Low_complexity Low_complexity 1 33 0 3 665 225 0 0 0 chr3L 10495799 10495824 -14047733 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 665 201 74 0 0 chr3L 10496004 10496031 -14047526 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 665 21 71 0 0 chr3L 10496365 10496407 -14047150 + AT_rich Low_complexity Low_complexity 1 42 0 3 665 194 105 26 0 chr3L 10496904 10496942 -14046615 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 665 285 155 0 0 chr3L 10497464 10497522 -14046035 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 665 21 36 0 0 chr3L 10500711 10500739 -14042818 + AT_rich Low_complexity Low_complexity 1 28 0 3 665 38 51 0 0 chr3L 10501056 10501115 -14042442 + AT_rich Low_complexity Low_complexity 1 59 0 3 665 33 90 0 0 chr3L 10501388 10501477 -14042080 + AT_rich Low_complexity Low_complexity 1 89 0 3 665 32 81 0 0 chr3L 10501554 10501628 -14041929 + AT_rich Low_complexity Low_complexity 1 74 0 3 665 375 60 0 0 chr3L 10502138 10502188 -14041369 + (CAA)n Simple_repeat Simple_repeat 1 50 0 3 665 186 150 0 0 chr3L 10502333 10502373 -14041184 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 3 665 53 81 0 0 chr3L 10502909 10503032 -14040525 + AT_rich Low_complexity Low_complexity 1 123 0 3 665 219 69 0 0 chr3L 10503451 10503480 -14040077 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 665 210 37 0 0 chr3L 10503777 10503804 -14039753 + (T)n Simple_repeat Simple_repeat 1 27 0 3 665 198 71 0 0 chr3L 10504009 10504037 -14039520 + (T)n Simple_repeat Simple_repeat 1 28 0 3 665 201 171 0 0 chr3L 10504203 10504238 -14039319 + A-rich Low_complexity Low_complexity 1 35 0 3 665 30 77 0 0 chr3L 10505354 10505419 -14038138 + AT_rich Low_complexity Low_complexity 1 65 0 3 665 192 77 0 0 chr3L 10505653 10505679 -14037878 + (T)n Simple_repeat Simple_repeat 1 26 0 3 665 37 0 0 0 chr3L 10506219 10506256 -14037301 + AT_rich Low_complexity Low_complexity 1 37 0 3 665 21 0 0 0 chr3L 10506450 10506471 -14037086 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 216 0 0 0 chr3L 10507954 10507978 -14035579 + (CTG)n Simple_repeat Simple_repeat 1 24 0 3 665 30 59 0 0 chr3L 10508076 10508127 -14035430 + AT_rich Low_complexity Low_complexity 1 51 0 3 665 27 49 0 0 chr3L 10508734 10508775 -14034782 + AT_rich Low_complexity Low_complexity 1 41 0 3 665 203 184 0 0 chr3L 10509486 10509524 -14034033 + GA-rich Low_complexity Low_complexity 2 39 0 3 665 204 206 0 0 chr3L 10509607 10509641 -14033916 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 665 201 237 0 0 chr3L 10510879 10510938 -14032619 + (CTCG)n Simple_repeat Simple_repeat 1 59 0 3 665 27 29 0 0 chr3L 10512652 10512686 -14030871 + AT_rich Low_complexity Low_complexity 1 34 0 3 665 234 136 0 0 chr3L 10514780 10514824 -14028733 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 665 203 175 0 0 chr3L 10515031 10515071 -14028486 + T-rich Low_complexity Low_complexity 1 40 0 3 665 21 57 0 0 chr3L 10517630 10517665 -14025892 + AT_rich Low_complexity Low_complexity 1 35 0 3 665 24 67 0 0 chr3L 10517698 10517743 -14025814 + AT_rich Low_complexity Low_complexity 1 45 0 3 665 22 56 0 0 chr3L 10517948 10517984 -14025573 + AT_rich Low_complexity Low_complexity 1 36 0 3 665 21 36 0 0 chr3L 10520071 10520099 -14023458 + AT_rich Low_complexity Low_complexity 1 28 0 3 665 216 111 0 0 chr3L 10523096 10523132 -14020425 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 665 23 33 0 0 chr3L 10523929 10523959 -14019598 + AT_rich Low_complexity Low_complexity 1 30 0 3 665 189 0 0 0 chr3L 10523964 10523985 -14019572 + (T)n Simple_repeat Simple_repeat 1 21 0 3 665 195 42 0 0 chr3L 10524321 10524345 -14019212 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 665 26 0 0 0 chr3L 10527688 10527714 -14015843 + AT_rich Low_complexity Low_complexity 1 26 0 3 665 24 0 0 0 chr3L 10528014 10528038 -14015519 + AT_rich Low_complexity Low_complexity 1 24 0 3 665 180 111 0 0 chr3L 10528617 10528644 -14014913 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 665 40 49 0 0 chr3L 10529626 10529687 -14013870 + AT_rich Low_complexity Low_complexity 1 61 0 3 665 22 35 0 0 chr3L 10530271 10530300 -14013257 + AT_rich Low_complexity Low_complexity 1 29 0 3 665 195 146 0 0 chr3L 10531581 10531622 -14011935 + (T)n Simple_repeat Simple_repeat 1 41 0 3 665 21 0 0 0 chr3L 10531988 10532009 -14011548 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 210 87 42 42 chr3L 10533903 10533951 -14009606 + (TA)n Simple_repeat Simple_repeat 1 48 0 3 665 21 0 0 0 chr3L 10541955 10541976 -14001581 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 202 194 0 0 chr3L 10543349 10543385 -14000172 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 665 26 30 0 0 chr3L 10543785 10543818 -13999739 + AT_rich Low_complexity Low_complexity 1 33 0 3 665 221 180 20 0 chr3L 10545076 10545126 -13998431 + (TTG)n Simple_repeat Simple_repeat 1 51 0 3 665 218 200 0 0 chr3L 10545446 10545486 -13998071 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 665 22 35 0 0 chr3L 10545703 10545732 -13997825 + AT_rich Low_complexity Low_complexity 1 29 0 3 665 23 33 0 0 chr3L 10550181 10550211 -13993346 + AT_rich Low_complexity Low_complexity 1 30 0 3 665 30 27 0 0 chr3L 10555495 10555532 -13988025 + AT_rich Low_complexity Low_complexity 1 37 0 3 665 217 180 0 20 chr3L 10555750 10555801 -13987756 + (CAT)n Simple_repeat Simple_repeat 1 50 0 3 665 39 0 0 0 chr3L 10555889 10555928 -13987629 + AT_rich Low_complexity Low_complexity 1 39 0 3 665 224 185 0 18 chr3L 10561144 10561199 -13982358 + CT-rich Low_complexity Low_complexity 1 54 0 3 665 243 155 0 0 chr3L 10561330 10561401 -13982156 + ROO_I LTR Pao 656 726 -7530 3 665 204 97 0 0 chr3L 10561919 10561950 -13981607 + (GTTTG)n Simple_repeat Simple_repeat 1 31 0 3 665 293 0 0 26 chr3L 10561971 10562009 -13981548 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 665 210 156 0 0 chr3L 10562565 10562610 -13980947 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 665 28 0 0 0 chr3L 10564364 10564392 -13979165 + AT_rich Low_complexity Low_complexity 1 28 0 3 665 195 100 0 0 chr3L 10565990 10566020 -13977537 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 665 204 67 0 0 chr3L 10566630 10566660 -13976897 + (CGG)n Simple_repeat Simple_repeat 2 31 0 3 665 22 0 0 0 chr3L 10567501 10567523 -13976034 + AT_rich Low_complexity Low_complexity 1 22 0 3 665 194 105 26 0 chr3L 10568245 10568283 -13975274 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 665 32 0 0 0 chr3L 10569357 10569389 -13974168 + AT_rich Low_complexity Low_complexity 1 32 0 3 665 26 0 0 0 chr3L 10569412 10569438 -13974119 + AT_rich Low_complexity Low_complexity 1 26 0 3 665 222 267 13 13 chr3L 10569588 10569664 -13973893 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 665 219 197 0 32 chr3L 10569841 10569904 -13973653 + T-rich Low_complexity Low_complexity 1 61 0 3 665 210 71 0 0 chr3L 10570298 10570326 -13973231 + (ATG)n Simple_repeat Simple_repeat 2 29 0 3 665 201 39 0 0 chr3L 10571447 10571473 -13972084 + (GGATG)n Simple_repeat Simple_repeat 5 30 0 3 665 387 73 0 0 chr3L 10572110 10572165 -13971392 + (CAGT)n Simple_repeat Simple_repeat 2 56 0 3 665 208 147 0 0 chr3L 10572516 10572550 -13971007 + (T)n Simple_repeat Simple_repeat 1 34 0 3 665 180 77 0 0 chr3L 10572607 10572633 -13970924 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 3 665 189 121 0 0 chr3L 10573351 10573384 -13970173 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 665 240 267 0 34 chr3L 10575048 10575137 -13968420 + (CGG)n Simple_repeat Simple_repeat 3 88 0 3 665 21 0 0 0 chr3L 10576935 10576956 -13966601 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 34 0 0 0 chr3L 10576990 10577024 -13966533 + AT_rich Low_complexity Low_complexity 1 34 0 3 665 21 0 0 0 chr3L 10577758 10577779 -13965778 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 211 122 20 20 chr3L 10578106 10578156 -13965401 + (CAG)n Simple_repeat Simple_repeat 1 50 0 3 665 309 157 9 38 chr3L 10578182 10578288 -13965269 + ROO_I LTR Pao 639 741 -7515 3 665 37 39 0 0 chr3L 10578978 10579029 -13964528 + AT_rich Low_complexity Low_complexity 1 51 0 3 665 201 39 0 0 chr3L 10579690 10579716 -13963841 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 665 288 91 0 0 chr3L 10579753 10579797 -13963760 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 665 26 0 0 0 chr3L 10579902 10579928 -13963629 + AT_rich Low_complexity Low_complexity 1 26 0 3 665 21 0 0 0 chr3L 10580344 10580365 -13963192 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 261 263 8 33 chr3L 10582859 10582981 -13960576 + (TTTA)n Simple_repeat Simple_repeat 4 122 0 3 665 26 0 0 0 chr3L 10583073 10583099 -13960458 + AT_rich Low_complexity Low_complexity 1 26 0 3 665 24 0 0 0 chr3L 10583287 10583311 -13960246 + AT_rich Low_complexity Low_complexity 1 24 0 3 665 202 220 0 0 chr3L 10584020 10584070 -13959487 + A-rich Low_complexity Low_complexity 1 50 0 3 665 183 80 0 0 chr3L 10584174 10584199 -13959358 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 665 27 29 0 0 chr3L 10584823 10584857 -13958700 + AT_rich Low_complexity Low_complexity 1 34 0 3 665 28 48 0 0 chr3L 10586359 10586401 -13957156 + AT_rich Low_complexity Low_complexity 1 42 0 3 665 222 118 0 0 chr3L 10587559 10587593 -13955964 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 665 24 0 0 0 chr3L 10589553 10589577 -13953980 + AT_rich Low_complexity Low_complexity 1 24 0 3 665 23 68 0 0 chr3L 10590430 10590474 -13953083 + AT_rich Low_complexity Low_complexity 1 44 0 3 665 22 35 0 0 chr3L 10594733 10594762 -13948795 + AT_rich Low_complexity Low_complexity 1 29 0 3 665 22 35 0 0 chr3L 10594842 10594871 -13948686 + AT_rich Low_complexity Low_complexity 1 29 0 3 665 22 0 0 0 chr3L 10596766 10596788 -13946769 + AT_rich Low_complexity Low_complexity 1 22 0 3 665 204 125 0 0 chr3L 10598161 10598193 -13945364 + (A)n Simple_repeat Simple_repeat 1 32 0 3 665 31 26 0 0 chr3L 10599562 10599600 -13943957 + AT_rich Low_complexity Low_complexity 1 38 0 3 665 21 0 0 0 chr3L 10599658 10599679 -13943878 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 23 54 0 0 chr3L 10600474 10600511 -13943046 + AT_rich Low_complexity Low_complexity 1 37 0 3 665 228 111 0 0 chr3L 10600990 10601026 -13942531 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 3 665 26 74 0 0 chr3L 10601411 10601465 -13942092 + AT_rich Low_complexity Low_complexity 1 54 0 3 665 25 31 0 0 chr3L 10602542 10602574 -13940983 + AT_rich Low_complexity Low_complexity 1 32 0 3 665 21 0 0 0 chr3L 10603333 10603354 -13940203 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 21 0 0 0 chr3L 10605561 10605582 -13937975 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 41 58 0 0 chr3L 10607714 10607783 -13935774 + AT_rich Low_complexity Low_complexity 1 69 0 3 665 46 45 0 0 chr3L 10607923 10607990 -13935567 + AT_rich Low_complexity Low_complexity 1 67 0 3 665 180 0 0 0 chr3L 10608377 10608397 -13935160 + (ATGGTG)n Simple_repeat Simple_repeat 6 25 0 3 665 213 219 0 0 chr3L 10610247 10610288 -13933269 + (TATATG)n Simple_repeat Simple_repeat 6 46 0 3 665 206 150 25 0 chr3L 10612851 10612891 -13930666 + (CGAG)n Simple_repeat Simple_repeat 4 44 0 3 665 21 0 0 0 chr3L 10613343 10613364 -13930193 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 40 49 0 0 chr3L 10613452 10613513 -13930044 + AT_rich Low_complexity Low_complexity 1 61 0 3 665 24 67 0 0 chr3L 10613571 10613616 -13929941 + AT_rich Low_complexity Low_complexity 1 45 0 3 665 33 56 0 0 chr3L 10614759 10614813 -13928744 + AT_rich Low_complexity Low_complexity 1 54 0 3 665 21 0 0 0 chr3L 10615714 10615735 -13927822 + AT_rich Low_complexity Low_complexity 1 21 0 3 665 36 97 0 0 chr3L 10616078 10616191 -13927366 + AT_rich Low_complexity Low_complexity 1 113 0 3 665 225 276 0 0 chr3L 10616307 10616394 -13927163 + CT-rich Low_complexity Low_complexity 3 89 0 3 666 30 83 0 0 chr3L 10620484 10620556 -13923001 + AT_rich Low_complexity Low_complexity 1 72 0 3 666 22 0 0 0 chr3L 10620794 10620816 -13922741 + AT_rich Low_complexity Low_complexity 1 22 0 3 666 21 0 0 0 chr3L 10623142 10623163 -13920394 + AT_rich Low_complexity Low_complexity 1 21 0 3 666 210 111 66 53 chr3L 10631060 10631136 -13912421 + (TATAA)n Simple_repeat Simple_repeat 1 77 0 3 666 25 31 0 0 chr3L 10631317 10631349 -13912208 + AT_rich Low_complexity Low_complexity 1 32 0 3 666 26 50 0 0 chr3L 10633823 10633863 -13909694 + AT_rich Low_complexity Low_complexity 1 40 0 3 666 188 184 0 20 chr3L 10638057 10638107 -13905450 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 666 240 163 0 0 chr3L 10638191 10638234 -13905323 + (CAT)n Simple_repeat Simple_repeat 1 43 0 3 666 294 164 0 0 chr3L 10639193 10639248 -13904309 + (CAGT)n Simple_repeat Simple_repeat 4 58 0 3 666 25 51 0 0 chr3L 10644976 10645015 -13898542 + AT_rich Low_complexity Low_complexity 1 39 0 3 666 27 0 0 0 chr3L 10645597 10645624 -13897933 + AT_rich Low_complexity Low_complexity 1 27 0 3 666 180 77 0 0 chr3L 10649060 10649086 -13894471 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 3 666 22 56 0 0 chr3L 10651921 10651957 -13891600 + AT_rich Low_complexity Low_complexity 1 36 0 3 666 22 56 0 0 chr3L 10653171 10653207 -13890350 + AT_rich Low_complexity Low_complexity 1 36 0 3 666 201 39 0 0 chr3L 10653439 10653465 -13890092 + (TC)n Simple_repeat Simple_repeat 2 27 0 3 666 28 0 0 0 chr3L 10653903 10653931 -13889626 + AT_rich Low_complexity Low_complexity 1 28 0 3 666 192 40 0 0 chr3L 10654369 10654394 -13889163 + (TATAA)n Simple_repeat Simple_repeat 1 25 0 3 666 214 162 0 0 chr3L 10658071 10658108 -13885449 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 666 209 258 16 0 chr3L 10659908 10659970 -13883587 + CT-rich Low_complexity Low_complexity 2 64 0 3 666 231 230 13 13 chr3L 10660011 10660086 -13883471 + (TTG)n Simple_repeat Simple_repeat 2 76 0 3 666 209 128 21 0 chr3L 10662949 10662996 -13880561 + (CAA)n Simple_repeat Simple_repeat 2 49 0 3 666 183 100 0 0 chr3L 10663475 10663505 -13880052 + (CTG)n Simple_repeat Simple_repeat 1 30 0 3 666 189 74 0 0 chr3L 10665097 10665124 -13878433 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 666 26 30 0 0 chr3L 10666325 10666358 -13877199 + AT_rich Low_complexity Low_complexity 1 33 0 3 666 209 98 24 0 chr3L 10667334 10667375 -13876182 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 666 251 257 0 0 chr3L 10667414 10667484 -13876073 + CT-rich Low_complexity Low_complexity 2 71 0 3 666 232 218 0 18 chr3L 10669081 10669137 -13874420 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 666 180 125 0 0 chr3L 10671115 10671147 -13872410 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 666 221 207 17 17 chr3L 10672313 10672372 -13871185 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 3 666 233 226 16 16 chr3L 10674025 10674088 -13869469 + (CACCC)n Simple_repeat Simple_repeat 5 67 0 3 666 228 167 24 0 chr3L 10674639 10674681 -13868876 + (TATG)n Simple_repeat Simple_repeat 1 43 0 3 666 270 179 0 0 chr3L 10675152 10675208 -13868349 + (TTG)n Simple_repeat Simple_repeat 1 56 0 3 666 23 54 0 0 chr3L 10676003 10676040 -13867517 + AT_rich Low_complexity Low_complexity 1 37 0 3 666 23 0 0 0 chr3L 10676052 10676075 -13867482 + AT_rich Low_complexity Low_complexity 1 23 0 3 666 21 36 0 0 chr3L 10677247 10677275 -13866282 + AT_rich Low_complexity Low_complexity 1 28 0 3 666 258 245 0 0 chr3L 10678361 10678459 -13865098 + (CAA)n Simple_repeat Simple_repeat 1 98 0 3 666 258 286 0 0 chr3L 10681330 10681414 -13862143 + (CAG)n Simple_repeat Simple_repeat 1 84 0 3 666 31 44 0 0 chr3L 10682847 10682892 -13860665 + AT_rich Low_complexity Low_complexity 1 45 0 3 666 213 39 0 0 chr3L 10683479 10683505 -13860052 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 666 203 88 29 0 chr3L 10684310 10684344 -13859213 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 666 180 0 0 0 chr3L 10689754 10689774 -13853783 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3 666 21 36 0 0 chr3L 10690217 10690245 -13853312 + AT_rich Low_complexity Low_complexity 1 28 0 3 666 57 71 0 0 chr3L 10690285 10690398 -13853159 + AT_rich Low_complexity Low_complexity 1 113 0 3 666 216 196 0 21 chr3L 10690443 10690490 -13853067 + CT-rich Low_complexity Low_complexity 2 47 0 3 666 23 68 0 0 chr3L 10691121 10691165 -13852392 + AT_rich Low_complexity Low_complexity 1 44 0 3 666 26 0 0 0 chr3L 10691237 10691263 -13852294 + AT_rich Low_complexity Low_complexity 1 26 0 3 666 29 70 0 0 chr3L 10691465 10691522 -13852035 + AT_rich Low_complexity Low_complexity 1 57 0 3 666 240 35 0 0 chr3L 10691945 10691974 -13851583 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 666 29 0 0 0 chr3L 10692086 10692115 -13851442 + AT_rich Low_complexity Low_complexity 1 29 0 3 666 381 70 0 0 chr3L 10692542 10692599 -13850958 + (CAT)n Simple_repeat Simple_repeat 1 57 0 3 666 212 158 18 0 chr3L 10692623 10692680 -13850877 + (CAG)n Simple_repeat Simple_repeat 2 59 0 3 666 201 152 0 0 chr3L 10693775 10693808 -13849749 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 666 225 139 0 0 chr3L 10693888 10693931 -13849626 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 666 180 0 0 0 chr3L 10694009 10694029 -13849528 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 666 26 50 0 0 chr3L 10694836 10694876 -13848681 + AT_rich Low_complexity Low_complexity 1 40 0 3 666 23 0 0 0 chr3L 10695135 10695158 -13848399 + AT_rich Low_complexity Low_complexity 1 23 0 3 666 203 152 0 0 chr3L 10695575 10695608 -13847949 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 666 246 81 0 0 chr3L 10696073 10696110 -13847447 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 666 22 35 0 0 chr3L 10696610 10696639 -13846918 + AT_rich Low_complexity Low_complexity 1 29 0 3 666 27 29 0 0 chr3L 10696702 10696736 -13846821 + AT_rich Low_complexity Low_complexity 1 34 0 3 666 233 259 0 36 chr3L 10697411 10697495 -13846062 + (TATATG)n Simple_repeat Simple_repeat 5 85 0 3 666 229 277 0 0 chr3L 10698079 10698144 -13845413 + (TTG)n Simple_repeat Simple_repeat 1 65 0 3 666 34 72 0 0 chr3L 10699576 10699645 -13843912 + AT_rich Low_complexity Low_complexity 1 69 0 3 666 210 91 0 0 chr3L 10700805 10700838 -13842719 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 666 21 0 0 0 chr3L 10700937 10700958 -13842599 + AT_rich Low_complexity Low_complexity 1 21 0 3 666 33 66 0 0 chr3L 10702311 10702372 -13841185 + AT_rich Low_complexity Low_complexity 1 61 0 3 666 216 250 0 0 chr3L 10703967 10704019 -13839538 + (GAGTG)n Simple_repeat Simple_repeat 1 52 0 3 666 366 61 0 0 chr3L 10704247 10704296 -13839261 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 666 249 139 0 0 chr3L 10704765 10704808 -13838749 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 666 195 146 0 0 chr3L 10705273 10705314 -13838243 + (T)n Simple_repeat Simple_repeat 1 41 0 3 666 23 0 0 0 chr3L 10705692 10705715 -13837842 + AT_rich Low_complexity Low_complexity 1 23 0 3 666 192 200 0 0 chr3L 10707041 10707091 -13836466 + T-rich Low_complexity Low_complexity 1 50 0 3 666 272 48 24 0 chr3L 10707374 10707416 -13836141 + (CATA)n Simple_repeat Simple_repeat 2 44 0 3 666 214 174 0 0 chr3L 10708549 10708595 -13834962 + T-rich Low_complexity Low_complexity 1 46 0 3 666 195 42 0 0 chr3L 10709350 10709374 -13834183 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 666 22 35 0 0 chr3L 10710376 10710405 -13833152 + AT_rich Low_complexity Low_complexity 1 29 0 3 666 273 268 0 0 chr3L 10713331 10713402 -13830155 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 666 39 100 0 0 chr3L 10714215 10714345 -13829212 + AT_rich Low_complexity Low_complexity 1 130 0 3 666 202 143 23 23 chr3L 10714599 10714642 -13828915 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 666 217 259 0 0 chr3L 10714687 10714741 -13828816 + T-rich Low_complexity Low_complexity 1 54 0 3 666 210 207 0 0 chr3L 10714846 10714904 -13828653 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 666 201 74 0 0 chr3L 10715597 10715624 -13827933 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 666 243 103 0 0 chr3L 10715897 10715936 -13827621 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 666 25 83 0 0 chr3L 10716529 10716589 -13826968 + AT_rich Low_complexity Low_complexity 1 60 0 3 666 300 176 0 0 chr3L 10716956 10717024 -13826533 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 666 201 94 0 0 chr3L 10717888 10717920 -13825637 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 666 24 53 0 0 chr3L 10718924 10718962 -13824595 + AT_rich Low_complexity Low_complexity 1 38 0 3 666 23 78 0 0 chr3L 10719961 10720012 -13823545 + AT_rich Low_complexity Low_complexity 1 51 0 3 666 22 70 0 0 chr3L 10720075 10720118 -13823439 + AT_rich Low_complexity Low_complexity 1 43 0 3 666 22 35 0 0 chr3L 10722058 10722087 -13821470 + AT_rich Low_complexity Low_complexity 1 29 0 3 666 32 43 0 0 chr3L 10722181 10722227 -13821330 + AT_rich Low_complexity Low_complexity 1 46 0 3 666 24 32 0 0 chr3L 10722295 10722326 -13821231 + AT_rich Low_complexity Low_complexity 1 31 0 3 666 213 185 0 71 chr3L 10724357 10724427 -13819130 + T-rich Low_complexity Low_complexity 5 69 0 3 666 22 56 0 0 chr3L 10726029 10726065 -13817492 + AT_rich Low_complexity Low_complexity 1 36 0 3 666 33 43 0 0 chr3L 10727385 10727432 -13816125 + AT_rich Low_complexity Low_complexity 1 47 0 3 666 21 0 0 0 chr3L 10727552 10727573 -13815984 + AT_rich Low_complexity Low_complexity 1 21 0 3 666 210 139 0 0 chr3L 10727730 10727766 -13815791 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 666 243 61 0 0 chr3L 10727875 10727908 -13815649 + (CAATT)n Simple_repeat Simple_repeat 4 36 0 3 666 248 102 20 0 chr3L 10728960 10729009 -13814548 + (TAAAA)n Simple_repeat Simple_repeat 5 54 0 3 666 180 77 0 0 chr3L 10730589 10730615 -13812942 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 666 306 281 24 24 chr3L 10730690 10730858 -13812699 + (TTG)n Simple_repeat Simple_repeat 1 168 0 3 666 42 71 0 0 chr3L 10731899 10731983 -13811574 + AT_rich Low_complexity Low_complexity 1 84 0 3 666 21 0 0 0 chr3L 10732011 10732032 -13811525 + AT_rich Low_complexity Low_complexity 1 21 0 3 666 183 42 0 0 chr3L 10732265 10732289 -13811268 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 666 183 42 0 0 chr3L 10732616 10732640 -13810917 + (TC)n Simple_repeat Simple_repeat 2 25 0 3 666 195 42 0 0 chr3L 10732762 10732786 -13810771 + (GA)n Simple_repeat Simple_repeat 1 24 0 3 666 189 0 0 0 chr3L 10733342 10733363 -13810194 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 666 204 258 0 16 chr3L 10733617 10733680 -13809877 + (TTG)n Simple_repeat Simple_repeat 2 63 0 3 666 201 167 0 0 chr3L 10733720 10733756 -13809801 + A-rich Low_complexity Low_complexity 4 39 0 3 666 240 162 13 51 chr3L 10734345 10734423 -13809134 + (CTTTG)n Simple_repeat Simple_repeat 5 79 0 3 666 198 0 0 0 chr3L 10735992 10736014 -13807543 + (TC)n Simple_repeat Simple_repeat 2 23 0 3 666 21 36 0 0 chr3L 10736692 10736720 -13806837 + AT_rich Low_complexity Low_complexity 1 28 0 3 666 198 71 0 0 chr3L 10739156 10739184 -13804373 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 666 189 0 0 0 chr3L 10739759 10739780 -13803777 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 3 666 252 130 0 0 chr3L 10740674 10740720 -13802837 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 666 23 0 0 0 chr3L 10742968 10742991 -13800566 + AT_rich Low_complexity Low_complexity 1 23 0 3 666 232 221 0 104 chr3L 10742994 10743100 -13800457 + T-rich Low_complexity Low_complexity 1 95 0 3 666 24 53 0 0 chr3L 10743535 10743573 -13799984 + AT_rich Low_complexity Low_complexity 1 38 0 3 666 180 0 0 0 chr3L 10746843 10746863 -13796694 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 3 666 204 200 0 0 chr3L 10747622 10747667 -13795890 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 666 312 148 0 0 chr3L 10747779 10747840 -13795717 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 667 282 56 0 0 chr3L 10747973 10748009 -13795548 + (TTG)n Simple_repeat Simple_repeat 2 37 0 3 667 35 78 0 0 chr3L 10748649 10748726 -13794831 + AT_rich Low_complexity Low_complexity 1 77 0 3 667 23 0 0 0 chr3L 10748769 10748792 -13794765 + AT_rich Low_complexity Low_complexity 1 23 0 3 667 31 0 0 0 chr3L 10750208 10750239 -13793318 + AT_rich Low_complexity Low_complexity 1 31 0 3 667 25 0 0 0 chr3L 10750816 10750841 -13792716 + AT_rich Low_complexity Low_complexity 1 25 0 3 667 207 106 29 57 chr3L 10751184 10751254 -13792303 + (TTG)n Simple_repeat Simple_repeat 1 68 0 3 667 21 36 0 0 chr3L 10752807 10752835 -13790722 + AT_rich Low_complexity Low_complexity 1 28 0 3 667 204 47 14 111 chr3L 10752954 10753026 -13790531 + (TATATG)n Simple_repeat Simple_repeat 1 65 0 3 667 210 37 0 0 chr3L 10754144 10754171 -13789386 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 667 21 36 0 0 chr3L 10755585 10755613 -13787944 + AT_rich Low_complexity Low_complexity 1 28 0 3 667 215 310 0 0 chr3L 10758120 10758191 -13785366 + T-rich Low_complexity Low_complexity 1 71 0 3 667 186 103 0 0 chr3L 10758526 10758555 -13785002 + (T)n Simple_repeat Simple_repeat 1 29 0 3 667 211 177 32 0 chr3L 10759474 10759536 -13784021 + (TTG)n Simple_repeat Simple_repeat 3 66 0 3 667 186 167 33 16 chr3L 10759550 10759611 -13783946 + (CAG)n Simple_repeat Simple_repeat 1 62 0 3 667 239 279 0 0 chr3L 10759988 10760067 -13783490 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 667 306 81 31 31 chr3L 10760778 10760842 -13782715 + (CAG)n Simple_repeat Simple_repeat 3 66 0 3 667 242 125 0 20 chr3L 10761135 10761184 -13782373 + (TTC)n Simple_repeat Simple_repeat 2 49 0 3 667 27 62 0 0 chr3L 10761806 10761854 -13781703 + AT_rich Low_complexity Low_complexity 1 48 0 3 667 26 64 0 0 chr3L 10762853 10762900 -13780657 + AT_rich Low_complexity Low_complexity 1 47 0 3 667 27 0 0 0 chr3L 10764154 10764181 -13779376 + AT_rich Low_complexity Low_complexity 1 27 0 3 667 306 148 0 0 chr3L 10764814 10764868 -13778689 + (CAGTT)n Simple_repeat Simple_repeat 3 56 0 3 667 279 146 0 0 chr3L 10765116 10765171 -13778386 + (TGGA)n Simple_repeat Simple_repeat 3 57 0 3 667 180 0 0 0 chr3L 10765294 10765314 -13778243 + (TAA)n Simple_repeat Simple_repeat 2 21 0 3 667 22 35 0 0 chr3L 10765694 10765723 -13777834 + AT_rich Low_complexity Low_complexity 1 29 0 3 667 24 32 0 0 chr3L 10765849 10765880 -13777677 + AT_rich Low_complexity Low_complexity 1 31 0 3 667 21 36 0 0 chr3L 10766367 10766395 -13777162 + AT_rich Low_complexity Low_complexity 1 28 0 3 667 222 130 17 69 chr3L 10767082 10767140 -13776417 + T-rich Low_complexity Low_complexity 2 56 0 3 667 240 35 0 0 chr3L 10769385 10769414 -13774143 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 667 282 188 49 24 chr3L 10771025 10771107 -13772450 + ROO_I LTR Pao 646 729 -7527 3 667 272 217 10 42 chr3L 10772482 10772578 -13770979 + A-rich Low_complexity Low_complexity 2 94 0 3 667 195 42 0 0 chr3L 10772595 10772619 -13770938 + (CAG)n Simple_repeat Simple_repeat 3 26 0 3 667 22 0 0 0 chr3L 10773068 10773090 -13770467 + AT_rich Low_complexity Low_complexity 1 22 0 3 667 200 200 0 14 chr3L 10773510 10773581 -13769976 + (ACTG)n Simple_repeat Simple_repeat 1 70 0 3 667 26 30 0 0 chr3L 10774954 10774987 -13768570 + AT_rich Low_complexity Low_complexity 1 33 0 3 667 24 0 0 0 chr3L 10775405 10775429 -13768128 + AT_rich Low_complexity Low_complexity 1 24 0 3 667 25 90 0 0 chr3L 10777833 10777900 -13765657 + AT_rich Low_complexity Low_complexity 1 67 0 3 667 267 237 0 0 chr3L 10778885 10778978 -13764579 + (TTG)n Simple_repeat Simple_repeat 1 93 0 3 667 34 72 0 0 chr3L 10779091 10779160 -13764397 + AT_rich Low_complexity Low_complexity 1 69 0 3 667 201 167 0 0 chr3L 10779448 10779484 -13764073 + A-rich Low_complexity Low_complexity 1 36 0 3 667 26 30 0 0 chr3L 10780389 10780422 -13763135 + AT_rich Low_complexity Low_complexity 1 33 0 3 667 22 0 0 0 chr3L 10780907 10780929 -13762628 + AT_rich Low_complexity Low_complexity 1 22 0 3 667 237 132 0 0 chr3L 10781232 10781270 -13762287 + (CAA)n Simple_repeat Simple_repeat 3 40 0 3 667 29 0 0 0 chr3L 10783725 10783754 -13759803 + AT_rich Low_complexity Low_complexity 1 29 0 3 667 24 0 0 0 chr3L 10785417 10785441 -13758116 + AT_rich Low_complexity Low_complexity 1 24 0 3 667 216 97 0 0 chr3L 10785897 10785928 -13757629 + (A)n Simple_repeat Simple_repeat 1 31 0 3 667 329 43 21 0 chr3L 10786759 10786806 -13756751 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 667 218 116 23 0 chr3L 10786943 10786986 -13756571 + (CAA)n Simple_repeat Simple_repeat 3 46 0 3 667 202 281 0 46 chr3L 10787629 10787737 -13755820 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 3 667 21 57 0 0 chr3L 10791689 10791724 -13751833 + AT_rich Low_complexity Low_complexity 1 35 0 3 667 230 159 0 0 chr3L 10792149 10792193 -13751364 + DOC3_DM LINE Jockey 531 574 -4166 3 667 229 253 0 0 chr3L 10792193 10792223 -13751334 + ROO_I LTR Pao 641 714 -7542 3 667 192 125 0 0 chr3L 10794395 10794427 -13749130 + (TGG)n Simple_repeat Simple_repeat 2 33 0 3 667 201 211 0 0 chr3L 10794436 10794488 -13749069 + (CGG)n Simple_repeat Simple_repeat 1 52 0 3 667 205 158 0 50 chr3L 10794593 10794653 -13748904 + (CGG)n Simple_repeat Simple_repeat 2 58 0 3 667 201 154 0 0 chr3L 10798760 10798799 -13744758 + (ATGGTG)n Simple_repeat Simple_repeat 2 40 0 3 667 51 31 0 0 chr3L 10799201 10799266 -13744291 + AT_rich Low_complexity Low_complexity 1 65 0 3 667 289 258 11 0 chr3L 10799862 10799951 -13743606 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 667 255 211 0 0 chr3L 10800031 10800083 -13743474 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 667 24 53 0 0 chr3L 10800833 10800871 -13742686 + AT_rich Low_complexity Low_complexity 1 38 0 3 667 1049 186 12 12 chr3L 10802961 10803211 -13740346 - XDMR Unknown Unknown -111 250 1 3 667 208 154 19 37 chr3L 10804048 10804102 -13739455 + (TTCG)n Simple_repeat Simple_repeat 1 53 0 3 667 276 30 0 0 chr3L 10804185 10804218 -13739339 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 667 21 57 0 0 chr3L 10804879 10804914 -13738643 + AT_rich Low_complexity Low_complexity 1 35 0 3 667 25 95 0 0 chr3L 10806178 10806252 -13737305 + AT_rich Low_complexity Low_complexity 1 74 0 3 667 186 43 0 0 chr3L 10806633 10806656 -13736901 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 667 183 42 0 0 chr3L 10806712 10806736 -13736821 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 667 216 67 0 0 chr3L 10806889 10806919 -13736638 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 667 233 310 0 20 chr3L 10807176 10807278 -13736279 + A-rich Low_complexity Low_complexity 4 103 0 3 667 23 0 0 0 chr3L 10809154 10809177 -13734380 + AT_rich Low_complexity Low_complexity 1 23 0 3 667 180 111 0 0 chr3L 10809917 10809944 -13733613 + (CTCA)n Simple_repeat Simple_repeat 3 29 0 3 667 38 0 0 0 chr3L 10810470 10810508 -13733049 + AT_rich Low_complexity Low_complexity 1 38 0 3 667 192 77 0 0 chr3L 10810835 10810861 -13732696 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 667 186 150 0 0 chr3L 10811254 10811294 -13732263 + (CCCA)n Simple_repeat Simple_repeat 2 41 0 3 667 21 0 0 0 chr3L 10813629 10813650 -13729907 + AT_rich Low_complexity Low_complexity 1 21 0 3 667 189 0 0 0 chr3L 10814495 10814516 -13729041 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3 667 218 95 24 0 chr3L 10817317 10817359 -13726198 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 667 204 156 43 43 chr3L 10817577 10817624 -13725933 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 3 667 224 208 0 0 chr3L 10818509 10818562 -13724995 + (CCA)n Simple_repeat Simple_repeat 3 55 0 3 667 34 0 0 0 chr3L 10819869 10819903 -13723654 + AT_rich Low_complexity Low_complexity 1 34 0 3 667 302 125 0 45 chr3L 10820963 10821030 -13722527 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 667 23 33 0 0 chr3L 10823939 10823969 -13719588 + AT_rich Low_complexity Low_complexity 1 30 0 3 667 23 33 0 0 chr3L 10825028 10825058 -13718499 + AT_rich Low_complexity Low_complexity 1 30 0 3 667 198 71 0 0 chr3L 10825940 10825968 -13717589 + (TTTCC)n Simple_repeat Simple_repeat 2 29 0 3 667 201 39 0 0 chr3L 10826074 10826100 -13717457 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 667 22 0 0 0 chr3L 10827453 10827475 -13716082 + AT_rich Low_complexity Low_complexity 1 22 0 3 667 22 35 0 0 chr3L 10830284 10830313 -13713244 + AT_rich Low_complexity Low_complexity 1 29 0 3 667 29 0 0 0 chr3L 10830654 10830683 -13712874 + AT_rich Low_complexity Low_complexity 1 29 0 3 667 25 0 0 0 chr3L 10832336 10832361 -13711196 + AT_rich Low_complexity Low_complexity 1 25 0 3 667 40 0 0 0 chr3L 10832383 10832423 -13711134 + AT_rich Low_complexity Low_complexity 1 40 0 3 667 214 125 35 35 chr3L 10834688 10834746 -13708811 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 3 667 28 0 0 0 chr3L 10836532 10836560 -13706997 + AT_rich Low_complexity Low_complexity 1 28 0 3 667 226 188 0 40 chr3L 10838096 10838146 -13705411 + (CCA)n Simple_repeat Simple_repeat 3 50 0 3 667 209 33 33 0 chr3L 10842985 10843015 -13700542 + (TTG)n Simple_repeat Simple_repeat 3 33 0 3 667 252 154 0 0 chr3L 10843276 10843328 -13700229 + (TTG)n Simple_repeat Simple_repeat 1 52 0 3 667 221 157 59 0 chr3L 10844445 10844496 -13699061 + (CACCAT)n Simple_repeat Simple_repeat 1 54 0 3 667 225 319 0 0 chr3L 10844655 10844724 -13698833 + (TTCGGG)n Simple_repeat Simple_repeat 2 70 0 3 667 22 0 0 0 chr3L 10845008 10845030 -13698527 + AT_rich Low_complexity Low_complexity 1 22 0 3 667 23 0 0 0 chr3L 10845405 10845428 -13698129 + AT_rich Low_complexity Low_complexity 1 23 0 3 667 192 77 0 0 chr3L 10845564 10845590 -13697967 + (CGAG)n Simple_repeat Simple_repeat 3 28 0 3 667 189 147 0 0 chr3L 10845703 10845737 -13697820 + (TTCGG)n Simple_repeat Simple_repeat 4 37 0 3 667 28 29 0 0 chr3L 10846704 10846739 -13696818 + AT_rich Low_complexity Low_complexity 1 35 0 3 667 251 194 0 100 chr3L 10847154 10847234 -13696323 + ROO_I LTR Pao 650 721 -7535 3 667 353 97 0 31 chr3L 10847521 10847585 -13695972 + (CTG)n Simple_repeat Simple_repeat 3 64 0 3 667 195 42 0 0 chr3L 10847636 10847660 -13695897 + (CTG)n Simple_repeat Simple_repeat 1 24 0 3 667 305 128 0 95 chr3L 10847707 10847802 -13695755 - ROO_I LTR Pao -7518 738 653 3 667 336 177 10 30 chr3L 10848786 10848885 -13694672 + ROO_I LTR Pao 641 737 -7519 3 667 28 48 0 0 chr3L 10849088 10849130 -13694427 + AT_rich Low_complexity Low_complexity 1 42 0 3 667 205 250 0 20 chr3L 10849223 10849272 -13694285 + (CCCGAA)n Simple_repeat Simple_repeat 4 51 0 3 667 202 225 0 0 chr3L 10849308 10849348 -13694209 + (CAT)n Simple_repeat Simple_repeat 2 41 0 3 667 205 200 20 0 chr3L 10849534 10849584 -13693973 + (TCG)n Simple_repeat Simple_repeat 2 52 0 3 667 261 57 0 0 chr3L 10849750 10849785 -13693772 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 667 229 213 0 0 chr3L 10850497 10850544 -13693013 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 667 24 0 0 0 chr3L 10851141 10851165 -13692392 + AT_rich Low_complexity Low_complexity 1 24 0 3 667 211 234 7 72 chr3L 10851404 10851542 -13692015 + A-rich Low_complexity Low_complexity 4 132 0 3 667 180 111 0 0 chr3L 10851873 10851900 -13691657 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 667 194 143 0 20 chr3L 10852052 10852102 -13691455 + (CAA)n Simple_repeat Simple_repeat 3 51 0 3 667 213 163 0 0 chr3L 10852199 10852248 -13691309 + A-rich Low_complexity Low_complexity 1 49 0 3 667 30 32 0 60 chr3L 10853002 10853069 -13690488 + AT_rich Low_complexity Low_complexity 1 63 0 3 667 201 138 0 0 chr3L 10856698 10856727 -13686830 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 667 232 280 0 36 chr3L 10859671 10859782 -13683775 + A-rich Low_complexity Low_complexity 2 108 0 3 667 276 208 29 38 chr3L 10861328 10861433 -13682124 + T-rich Low_complexity Low_complexity 5 108 0 3 667 21 57 0 0 chr3L 10861891 10861926 -13681631 + AT_rich Low_complexity Low_complexity 1 35 0 3 667 215 200 0 0 chr3L 10863235 10863275 -13680282 + (CAG)n Simple_repeat Simple_repeat 2 41 0 3 667 267 182 9 66 chr3L 10863280 10863386 -13680171 + ROO_I LTR Pao 639 738 -7518 3 667 336 138 0 0 chr3L 10863591 10863656 -13679901 + (CAG)n Simple_repeat Simple_repeat 1 65 0 3 667 183 80 0 0 chr3L 10864621 10864646 -13678911 + (CAG)n Simple_repeat Simple_repeat 1 25 0 3 667 210 150 0 0 chr3L 10867720 10867776 -13675781 + (A)n Simple_repeat Simple_repeat 1 56 0 3 667 28 0 0 0 chr3L 10867861 10867889 -13675668 + AT_rich Low_complexity Low_complexity 1 28 0 3 667 22 0 0 0 chr3L 10867982 10868004 -13675553 + AT_rich Low_complexity Low_complexity 1 22 0 3 667 207 188 0 72 chr3L 10868165 10868234 -13675323 + A-rich Low_complexity Low_complexity 2 65 0 3 667 22 0 0 0 chr3L 10868326 10868348 -13675209 + AT_rich Low_complexity Low_complexity 1 22 0 3 667 264 100 0 0 chr3L 10868832 10868872 -13674685 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 667 23 0 0 0 chr3L 10873761 10873784 -13669773 + AT_rich Low_complexity Low_complexity 1 23 0 3 667 23 0 0 0 chr3L 10876613 10876636 -13666921 + AT_rich Low_complexity Low_complexity 1 23 0 3 668 36 53 0 0 chr3L 10879293 10879350 -13664207 + AT_rich Low_complexity Low_complexity 1 57 0 3 668 206 118 0 0 chr3L 10879376 10879410 -13664147 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 668 200 86 29 0 chr3L 10879662 10879697 -13663860 + (TTA)n Simple_repeat Simple_repeat 3 38 0 3 668 204 159 0 22 chr3L 10880335 10880380 -13663177 + A-rich Low_complexity Low_complexity 4 47 0 3 668 21 71 0 0 chr3L 10880451 10880493 -13663064 + AT_rich Low_complexity Low_complexity 1 42 0 3 668 34 0 0 0 chr3L 10882682 10882716 -13660841 + AT_rich Low_complexity Low_complexity 1 34 0 3 668 268 62 78 0 chr3L 10882783 10882847 -13660710 + (TA)n Simple_repeat Simple_repeat 2 70 0 3 668 21 95 0 0 chr3L 10884486 10884549 -13659008 + AT_rich Low_complexity Low_complexity 1 63 0 3 668 375 208 367 13 chr3L 10885971 10886140 -13657417 + DNAREP1_DM LINE Penelope 366 594 0 3 668 40 59 0 0 chr3L 10886611 10886679 -13656878 + AT_rich Low_complexity Low_complexity 1 68 0 3 668 22 80 0 0 chr3L 10886699 10886749 -13656808 + AT_rich Low_complexity Low_complexity 1 50 0 3 668 27 0 0 0 chr3L 10888483 10888510 -13655047 + AT_rich Low_complexity Low_complexity 1 27 0 3 668 234 0 0 0 chr3L 10891211 10891237 -13652320 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 668 26 30 0 0 chr3L 10894862 10894895 -13648662 + AT_rich Low_complexity Low_complexity 1 33 0 3 668 22 35 0 0 chr3L 10895043 10895072 -13648485 + AT_rich Low_complexity Low_complexity 1 29 0 3 668 24 32 0 0 chr3L 10895836 10895867 -13647690 + AT_rich Low_complexity Low_complexity 1 31 0 3 668 22 0 0 0 chr3L 10896531 10896553 -13647004 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 33 0 0 0 chr3L 10896638 10896671 -13646886 + AT_rich Low_complexity Low_complexity 1 33 0 3 668 207 189 0 0 chr3L 10897052 10897089 -13646468 + (ATG)n Simple_repeat Simple_repeat 1 37 0 3 668 23 0 0 0 chr3L 10900175 10900198 -13643359 + AT_rich Low_complexity Low_complexity 1 23 0 3 668 201 74 0 0 chr3L 10900711 10900738 -13642819 + (CAGA)n Simple_repeat Simple_repeat 1 27 0 3 668 21 0 0 0 chr3L 10902887 10902908 -13640649 + AT_rich Low_complexity Low_complexity 1 21 0 3 668 180 111 0 0 chr3L 10903704 10903731 -13639826 + (CCGAG)n Simple_repeat Simple_repeat 5 31 0 3 668 22 0 0 0 chr3L 10904948 10904970 -13638587 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 22 0 0 0 chr3L 10905811 10905833 -13637724 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 21 0 0 0 chr3L 10908182 10908203 -13635354 + AT_rich Low_complexity Low_complexity 1 21 0 3 668 238 196 20 0 chr3L 10909012 10909063 -13634494 + (CTTTG)n Simple_repeat Simple_repeat 3 54 0 3 668 26 0 0 0 chr3L 10909444 10909470 -13634087 + AT_rich Low_complexity Low_complexity 1 26 0 3 668 22 0 0 0 chr3L 10910511 10910533 -13633024 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 29 0 0 0 chr3L 10910741 10910770 -13632787 + AT_rich Low_complexity Low_complexity 1 29 0 3 668 200 122 24 0 chr3L 10913295 10913336 -13630221 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 668 216 67 0 0 chr3L 10913543 10913573 -13629984 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 668 33 0 0 0 chr3L 10916268 10916301 -13627256 + AT_rich Low_complexity Low_complexity 1 33 0 3 668 27 49 0 0 chr3L 10917000 10917041 -13626516 + AT_rich Low_complexity Low_complexity 1 41 0 3 668 21 36 0 0 chr3L 10919701 10919729 -13623828 + AT_rich Low_complexity Low_complexity 1 28 0 3 668 23 33 0 0 chr3L 10920685 10920715 -13622842 + AT_rich Low_complexity Low_complexity 1 30 0 3 668 213 224 0 0 chr3L 10920849 10920907 -13622650 + (CAGTT)n Simple_repeat Simple_repeat 3 60 0 3 668 266 143 16 0 chr3L 10923320 10923383 -13620174 + (CATCC)n Simple_repeat Simple_repeat 1 64 0 3 668 23 33 0 0 chr3L 10924703 10924733 -13618824 + AT_rich Low_complexity Low_complexity 1 30 0 3 668 280 227 11 0 chr3L 10924993 10925081 -13618476 - ROO_I LTR Pao -7508 748 660 3 668 266 226 42 21 chr3L 10925161 10925256 -13618301 + (TTG)n Simple_repeat Simple_repeat 1 97 0 3 668 283 247 21 0 chr3L 10926811 10926904 -13616653 + ROO_I LTR Pao 655 749 -7507 3 668 216 207 0 33 chr3L 10927205 10927265 -13616292 + (CAG)n Simple_repeat Simple_repeat 1 58 0 3 668 195 42 0 0 chr3L 10927347 10927371 -13616186 + (CTG)n Simple_repeat Simple_repeat 3 26 0 3 668 207 114 0 0 chr3L 10927451 10927486 -13616071 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 668 288 120 0 0 chr3L 10927638 10927688 -13615869 + (CTG)n Simple_repeat Simple_repeat 1 50 0 3 668 189 121 0 0 chr3L 10928086 10928119 -13615438 + (T)n Simple_repeat Simple_repeat 1 33 0 3 668 200 238 0 0 chr3L 10929808 10929850 -13613707 + (CAA)n Simple_repeat Simple_repeat 3 44 0 3 668 22 0 0 0 chr3L 10931137 10931159 -13612398 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 246 268 20 30 chr3L 10931325 10931425 -13612132 + T-rich Low_complexity Low_complexity 2 100 0 3 668 192 77 0 0 chr3L 10931541 10931567 -13611990 + (CAG)n Simple_repeat Simple_repeat 1 26 0 3 668 189 0 0 0 chr3L 10933329 10933350 -13610207 + (CTG)n Simple_repeat Simple_repeat 3 23 0 3 668 213 39 0 0 chr3L 10933767 10933793 -13609764 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 668 214 240 0 0 chr3L 10934880 10934930 -13608627 + (CTG)n Simple_repeat Simple_repeat 1 50 0 3 668 318 87 0 0 chr3L 10935010 10935056 -13608501 + (CAGC)n Simple_repeat Simple_repeat 2 47 0 3 668 405 0 0 0 chr3L 10935194 10935239 -13608318 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 668 24 109 0 0 chr3L 10935757 10935858 -13607699 + AT_rich Low_complexity Low_complexity 1 101 0 3 668 183 80 0 0 chr3L 10936887 10936912 -13606645 + (CTG)n Simple_repeat Simple_repeat 1 25 0 3 668 23 86 0 0 chr3L 10937151 10937209 -13606348 + AT_rich Low_complexity Low_complexity 1 58 0 3 668 294 73 0 0 chr3L 10937576 10937617 -13605940 + (CCA)n Simple_repeat Simple_repeat 1 41 0 3 668 180 111 0 62 chr3L 10937739 10937787 -13605770 + (CTG)n Simple_repeat Simple_repeat 3 47 0 3 668 219 69 0 0 chr3L 10938080 10938109 -13605448 + (CAG)n Simple_repeat Simple_repeat 1 29 0 3 668 243 0 0 0 chr3L 10939816 10939843 -13603714 + (GAGTG)n Simple_repeat Simple_repeat 5 31 0 3 668 207 214 0 0 chr3L 10942443 10942485 -13601072 + T-rich Low_complexity Low_complexity 1 42 0 3 668 300 143 77 13 chr3L 10942663 10942741 -13600816 + ROO_I LTR Pao 642 724 -7532 3 668 204 158 0 0 chr3L 10942932 10942970 -13600587 + (CAG)n Simple_repeat Simple_repeat 1 38 0 3 668 214 183 23 47 chr3L 10944296 10944382 -13599175 + (TAAA)n Simple_repeat Simple_repeat 1 84 0 3 668 213 121 0 0 chr3L 10944592 10944625 -13598932 + (CTG)n Simple_repeat Simple_repeat 3 35 0 3 668 22 0 0 0 chr3L 10946960 10946982 -13596575 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 23 0 0 0 chr3L 10948441 10948464 -13595093 + AT_rich Low_complexity Low_complexity 1 23 0 3 668 49 32 0 0 chr3L 10949396 10949459 -13594098 + AT_rich Low_complexity Low_complexity 1 63 0 3 668 27 62 0 0 chr3L 10950743 10950791 -13592766 + AT_rich Low_complexity Low_complexity 1 48 0 3 668 228 228 0 0 chr3L 10956906 10956963 -13586594 + (CCA)n Simple_repeat Simple_repeat 1 57 0 3 668 191 81 54 0 chr3L 10958710 10958747 -13584810 + (GTATG)n Simple_repeat Simple_repeat 5 43 0 3 668 234 208 0 0 chr3L 10959557 10959610 -13583947 + (CCCGAA)n Simple_repeat Simple_repeat 1 53 0 3 668 21 104 0 0 chr3L 10960175 10960252 -13583305 + AT_rich Low_complexity Low_complexity 1 77 0 3 668 267 103 0 0 chr3L 10960558 10960597 -13582960 + (TATAG)n Simple_repeat Simple_repeat 2 40 0 3 668 259 191 15 0 chr3L 10960921 10960989 -13582568 + ROO_I LTR Pao 657 725 -7531 3 668 243 103 0 0 chr3L 10963246 10963285 -13580272 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 668 21 36 0 0 chr3L 10963929 10963957 -13579600 + AT_rich Low_complexity Low_complexity 1 28 0 3 668 35 24 0 0 chr3L 10965857 10965899 -13577658 + AT_rich Low_complexity Low_complexity 1 42 0 3 668 204 236 42 0 chr3L 10967222 10967294 -13576263 + (CTG)n Simple_repeat Simple_repeat 3 77 0 3 668 23 0 0 0 chr3L 10969638 10969661 -13573896 + AT_rich Low_complexity Low_complexity 1 23 0 3 668 253 190 0 0 chr3L 10969942 10970000 -13573557 - ROO_I LTR Pao -7524 732 675 3 668 231 103 0 0 chr3L 10970250 10970289 -13573268 + (CAGT)n Simple_repeat Simple_repeat 1 39 0 3 668 183 42 0 0 chr3L 10970907 10970931 -13572626 + (CATCG)n Simple_repeat Simple_repeat 1 24 0 3 668 22 0 0 0 chr3L 10971551 10971573 -13571984 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 265 24 23 23 chr3L 10972169 10972212 -13571345 + (TTG)n Simple_repeat Simple_repeat 2 44 0 3 668 22 0 0 0 chr3L 10974381 10974403 -13569154 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 227 136 68 0 chr3L 10974897 10974941 -13568616 + (TTAAA)n Simple_repeat Simple_repeat 3 49 0 3 668 228 67 0 0 chr3L 10977500 10977530 -13566027 + (TTA)n Simple_repeat Simple_repeat 2 31 0 3 668 218 167 0 0 chr3L 10977645 10977681 -13565876 + (CCG)n Simple_repeat Simple_repeat 2 37 0 3 668 21 57 0 0 chr3L 10978561 10978596 -13564961 + AT_rich Low_complexity Low_complexity 1 35 0 3 668 21 0 0 0 chr3L 10981407 10981428 -13562129 + AT_rich Low_complexity Low_complexity 1 21 0 3 668 21 36 0 0 chr3L 10983120 10983148 -13560409 + AT_rich Low_complexity Low_complexity 1 28 0 3 668 216 67 0 0 chr3L 10984061 10984091 -13559466 + (CAG)n Simple_repeat Simple_repeat 3 32 0 3 668 327 113 0 0 chr3L 10984178 10984231 -13559326 + (CTG)n Simple_repeat Simple_repeat 1 53 0 3 668 186 167 0 0 chr3L 10984552 10984588 -13558969 + (CTG)n Simple_repeat Simple_repeat 3 38 0 3 668 23 0 0 0 chr3L 10985148 10985171 -13558386 + AT_rich Low_complexity Low_complexity 1 23 0 3 668 205 172 15 15 chr3L 10986548 10986613 -13556944 + (CAA)n Simple_repeat Simple_repeat 3 67 0 3 668 186 71 0 0 chr3L 10988139 10988167 -13555390 + (T)n Simple_repeat Simple_repeat 1 28 0 3 668 27 0 0 0 chr3L 10988927 10988954 -13554603 + AT_rich Low_complexity Low_complexity 1 27 0 3 668 202 222 37 0 chr3L 10991021 10991075 -13552482 + (CAG)n Simple_repeat Simple_repeat 3 58 0 3 668 303 104 0 0 chr3L 10991394 10991442 -13552115 + (CTG)n Simple_repeat Simple_repeat 3 50 0 3 668 219 139 0 0 chr3L 10992104 10992140 -13551417 + (CTG)n Simple_repeat Simple_repeat 3 38 0 3 668 234 239 0 0 chr3L 10993110 10993156 -13550401 + GA-rich Low_complexity Low_complexity 2 47 0 3 668 186 143 0 0 chr3L 10997201 10997236 -13546321 + (CCA)n Simple_repeat Simple_repeat 1 35 0 3 668 273 29 0 0 chr3L 10998230 10998264 -13545293 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 668 313 287 0 0 chr3L 10999665 10999787 -13543770 + T-rich Low_complexity Low_complexity 1 122 0 3 668 252 59 0 0 chr3L 11000813 11000847 -13542710 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 668 294 50 0 0 chr3L 11001120 11001160 -13542397 + (ATG)n Simple_repeat Simple_repeat 1 40 0 3 668 22 0 0 0 chr3L 11001450 11001472 -13542085 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 21 0 0 0 chr3L 11003036 11003057 -13540500 + AT_rich Low_complexity Low_complexity 1 21 0 3 668 22 35 0 0 chr3L 11003191 11003220 -13540337 + AT_rich Low_complexity Low_complexity 1 29 0 3 668 207 0 0 0 chr3L 11004032 11004055 -13539502 + (TATG)n Simple_repeat Simple_repeat 1 23 0 3 668 221 197 52 13 chr3L 11004981 11005058 -13538499 + (CCA)n Simple_repeat Simple_repeat 1 80 0 3 668 264 174 20 80 chr3L 11005704 11005804 -13537753 + ROO_I LTR Pao 641 734 -7522 3 668 23 78 0 0 chr3L 11006149 11006200 -13537357 + AT_rich Low_complexity Low_complexity 1 51 0 3 668 24 0 0 0 chr3L 11007472 11007496 -13536061 + AT_rich Low_complexity Low_complexity 1 24 0 3 668 21 57 0 0 chr3L 11007585 11007620 -13535937 + AT_rich Low_complexity Low_complexity 1 35 0 3 668 21 57 0 0 chr3L 11007700 11007735 -13535822 + AT_rich Low_complexity Low_complexity 1 35 0 3 668 23 0 0 0 chr3L 11007759 11007782 -13535775 + AT_rich Low_complexity Low_complexity 1 23 0 3 668 210 71 0 0 chr3L 11008048 11008076 -13535481 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 3 668 36 77 0 0 chr3L 11009830 11009908 -13533649 + AT_rich Low_complexity Low_complexity 1 78 0 3 669 204 255 0 0 chr3L 11012277 11012324 -13531233 + T-rich Low_complexity Low_complexity 1 47 0 3 669 230 222 0 0 chr3L 11013653 11013698 -13529859 + (CTG)n Simple_repeat Simple_repeat 1 45 0 3 669 204 200 0 0 chr3L 11013845 11013895 -13529662 + (TTG)n Simple_repeat Simple_repeat 1 50 0 3 669 291 214 24 12 chr3L 11014032 11014117 -13529440 - ROO_I LTR Pao -7530 726 641 3 669 234 0 0 0 chr3L 11014310 11014336 -13529221 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 669 245 184 20 0 chr3L 11015195 11015244 -13528313 + (CAG)n Simple_repeat Simple_repeat 1 50 0 3 669 240 207 0 0 chr3L 11015357 11015415 -13528142 - ROO_I LTR Pao -7542 714 657 3 669 225 180 0 0 chr3L 11015794 11015844 -13527713 + (CAG)n Simple_repeat Simple_repeat 3 52 0 3 669 31 99 0 0 chr3L 11016050 11016151 -13527406 + AT_rich Low_complexity Low_complexity 1 101 0 3 669 35 41 0 0 chr3L 11020458 11020507 -13523050 + AT_rich Low_complexity Low_complexity 1 49 0 3 669 29 47 0 0 chr3L 11022502 11022545 -13521012 + AT_rich Low_complexity Low_complexity 1 43 0 3 669 189 0 0 0 chr3L 11023431 11023452 -13520105 + (ATG)n Simple_repeat Simple_repeat 2 22 0 3 669 210 150 0 0 chr3L 11024099 11024139 -13519418 + (A)n Simple_repeat Simple_repeat 1 40 0 3 669 217 250 0 42 chr3L 11024835 11024906 -13518651 + G-rich Low_complexity Low_complexity 3 70 0 3 669 53 40 0 0 chr3L 11025002 11025076 -13518481 + AT_rich Low_complexity Low_complexity 1 74 0 3 669 207 328 0 0 chr3L 11026570 11026637 -13516920 + G-rich Low_complexity Low_complexity 1 67 0 3 669 180 0 0 0 chr3L 11028281 11028301 -13515256 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 669 252 59 0 0 chr3L 11029859 11029893 -13513664 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 669 22 56 0 0 chr3L 11031649 11031685 -13511872 + AT_rich Low_complexity Low_complexity 1 36 0 3 669 21 71 0 0 chr3L 11034733 11034775 -13508782 + AT_rich Low_complexity Low_complexity 1 42 0 3 669 180 111 0 0 chr3L 11035136 11035163 -13508394 + (CAGT)n Simple_repeat Simple_repeat 4 30 0 3 669 23 78 0 0 chr3L 11035410 11035461 -13508096 + AT_rich Low_complexity Low_complexity 1 51 0 3 669 34 0 0 0 chr3L 11036002 11036036 -13507521 + AT_rich Low_complexity Low_complexity 1 34 0 3 669 25 31 0 0 chr3L 11036284 11036316 -13507241 + AT_rich Low_complexity Low_complexity 1 32 0 3 669 180 0 0 0 chr3L 11038425 11038445 -13505112 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 669 284 173 0 39 chr3L 11039806 11039884 -13503673 + GA-rich Low_complexity Low_complexity 1 75 0 3 669 24 0 0 0 chr3L 11044595 11044619 -13498938 + AT_rich Low_complexity Low_complexity 1 24 0 3 669 213 39 0 0 chr3L 11045774 11045800 -13497757 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 669 208 139 0 0 chr3L 11046063 11046099 -13497458 + (A)n Simple_repeat Simple_repeat 1 36 0 3 669 216 0 0 0 chr3L 11049924 11049948 -13493609 + (ACTCG)n Simple_repeat Simple_repeat 3 26 0 3 669 31 0 0 0 chr3L 11050833 11050864 -13492693 + AT_rich Low_complexity Low_complexity 1 31 0 3 669 23 33 0 0 chr3L 11055835 11055865 -13487692 + AT_rich Low_complexity Low_complexity 1 30 0 3 669 22 0 0 0 chr3L 11057893 11057915 -13485642 + AT_rich Low_complexity Low_complexity 1 22 0 3 669 22 0 0 0 chr3L 11061984 11062006 -13481551 + AT_rich Low_complexity Low_complexity 1 22 0 3 669 28 0 0 0 chr3L 11063284 11063312 -13480245 + AT_rich Low_complexity Low_complexity 1 28 0 3 669 22 80 0 0 chr3L 11067585 11067635 -13475922 + AT_rich Low_complexity Low_complexity 1 50 0 3 669 21 0 0 0 chr3L 11067729 11067750 -13475807 + AT_rich Low_complexity Low_complexity 1 21 0 3 669 267 103 0 0 chr3L 11071211 11071250 -13472307 + (ATG)n Simple_repeat Simple_repeat 3 41 0 3 669 22 70 0 0 chr3L 11077285 11077328 -13466229 + AT_rich Low_complexity Low_complexity 1 43 0 3 669 12550 90 3 2 chr3L 11080211 11081945 -13461612 - S_DM DNA Tc1 0 1736 1 3 669 22 0 0 0 chr3L 11083380 11083402 -13460155 + AT_rich Low_complexity Low_complexity 1 22 0 3 669 231 170 0 0 chr3L 11084122 11084169 -13459388 + (CTG)n Simple_repeat Simple_repeat 3 49 0 3 669 240 311 0 0 chr3L 11084404 11084478 -13459079 + (TTG)n Simple_repeat Simple_repeat 2 75 0 3 669 21 0 0 0 chr3L 11091398 11091419 -13452138 + AT_rich Low_complexity Low_complexity 1 21 0 3 669 255 175 0 0 chr3L 11096724 11096781 -13446776 + (TGG)n Simple_repeat Simple_repeat 2 58 0 3 669 24 53 0 0 chr3L 11097264 11097302 -13446255 + AT_rich Low_complexity Low_complexity 1 38 0 3 669 620 176 245 84 chr3L 11097358 11097631 -13445926 - DNAREP1_DM LINE Penelope -25 569 253 3 669 29 28 0 0 chr3L 11098178 11098214 -13445343 + AT_rich Low_complexity Low_complexity 1 36 0 3 669 15221 2 0 0 chr3L 11098450 11100077 -13443480 + BS2 LINE Jockey 3095 4721 0 3 669 24 0 0 0 chr3L 11100077 11100101 -13443456 + AT_rich Low_complexity Low_complexity 1 24 0 3 669 237 228 0 0 chr3L 11101538 11101595 -13441962 + (CCA)n Simple_repeat Simple_repeat 3 59 0 3 669 320 103 17 0 chr3L 11107454 11107512 -13436045 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 669 190 116 23 23 chr3L 11107563 11107607 -13435950 + (TTTG)n Simple_repeat Simple_repeat 3 46 0 3 669 288 77 0 0 chr3L 11108612 11108651 -13434906 + (CTG)n Simple_repeat Simple_repeat 1 39 0 3 669 195 42 0 0 chr3L 11109981 11110005 -13433552 + (CTG)n Simple_repeat Simple_repeat 3 26 0 3 669 248 214 0 0 chr3L 11110038 11110094 -13433463 + (CTG)n Simple_repeat Simple_repeat 1 56 0 3 669 239 222 19 48 chr3L 11110770 11110874 -13432683 - ROO_I LTR Pao -7510 746 646 3 669 314 225 0 9 chr3L 11110987 11111099 -13432458 + (TTG)n Simple_repeat Simple_repeat 3 113 0 3 669 195 42 0 0 chr3L 11111676 11111700 -13431857 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 669 34 42 0 0 chr3L 11112312 11112360 -13431197 + AT_rich Low_complexity Low_complexity 1 48 0 3 669 200 308 0 32 chr3L 11112920 11113014 -13430543 + (CATA)n Simple_repeat Simple_repeat 1 91 0 3 669 204 179 0 0 chr3L 11113390 11113429 -13430128 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 669 231 167 0 0 chr3L 11118713 11118755 -13424802 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 3 669 21 36 0 0 chr3L 11119162 11119190 -13424367 + AT_rich Low_complexity Low_complexity 1 28 0 3 669 202 324 0 0 chr3L 11124126 11124228 -13419329 + (CCA)n Simple_repeat Simple_repeat 1 102 0 3 669 22 80 0 0 chr3L 11124952 11125002 -13418555 + AT_rich Low_complexity Low_complexity 1 50 0 3 669 210 71 0 0 chr3L 11126035 11126063 -13417494 + (CAG)n Simple_repeat Simple_repeat 2 29 0 3 669 22 35 0 0 chr3L 11127548 11127577 -13415980 + AT_rich Low_complexity Low_complexity 1 29 0 3 669 30 45 0 0 chr3L 11128543 11128587 -13414970 + AT_rich Low_complexity Low_complexity 1 44 0 3 669 219 279 24 16 chr3L 11129610 11129734 -13413823 + T-rich Low_complexity Low_complexity 2 126 0 3 669 24 32 0 0 chr3L 11137666 11137697 -13405860 + AT_rich Low_complexity Low_complexity 1 31 0 3 669 21 0 0 0 chr3L 11137832 11137853 -13405704 + AT_rich Low_complexity Low_complexity 1 21 0 3 669 192 40 0 0 chr3L 11139819 11139844 -13403713 + (GTATG)n Simple_repeat Simple_repeat 5 29 0 3 670 21 0 0 0 chr3L 11142103 11142124 -13401433 + AT_rich Low_complexity Low_complexity 1 21 0 3 670 23 0 0 0 chr3L 11142776 11142799 -13400758 + AT_rich Low_complexity Low_complexity 1 23 0 3 670 189 0 0 0 chr3L 11144315 11144336 -13399221 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 670 22 0 0 0 chr3L 11145934 11145956 -13397601 + AT_rich Low_complexity Low_complexity 1 22 0 3 670 25 83 0 0 chr3L 11147869 11147929 -13395628 + AT_rich Low_complexity Low_complexity 1 60 0 3 670 26 0 0 0 chr3L 11148816 11148842 -13394715 + AT_rich Low_complexity Low_complexity 1 26 0 3 670 207 0 0 0 chr3L 11149933 11149956 -13393601 + (A)n Simple_repeat Simple_repeat 1 23 0 3 670 263 227 0 39 chr3L 11152567 11152645 -13390912 + ROO_I LTR Pao 669 743 -7513 3 670 32 26 0 0 chr3L 11152797 11152836 -13390721 + AT_rich Low_complexity Low_complexity 1 39 0 3 670 28 0 0 0 chr3L 11154542 11154570 -13388987 + AT_rich Low_complexity Low_complexity 1 28 0 3 670 279 171 40 0 chr3L 11155065 11155141 -13388416 + ROO_I LTR Pao 651 729 -7527 3 670 216 0 0 0 chr3L 11155349 11155373 -13388184 + (CAG)n Simple_repeat Simple_repeat 1 24 0 3 670 252 0 0 0 chr3L 11156820 11156848 -13386709 + (CACAC)n Simple_repeat Simple_repeat 3 30 0 3 670 21 0 0 0 chr3L 11167303 11167324 -13376233 + AT_rich Low_complexity Low_complexity 1 21 0 3 670 24 32 0 0 chr3L 11168363 11168394 -13375163 + AT_rich Low_complexity Low_complexity 1 31 0 3 670 292 284 11 0 chr3L 11168713 11168808 -13374749 + (TGG)n Simple_repeat Simple_repeat 2 97 0 3 670 23 33 0 0 chr3L 11169062 11169092 -13374465 + AT_rich Low_complexity Low_complexity 1 30 0 3 670 30 59 0 0 chr3L 11169194 11169245 -13374312 + AT_rich Low_complexity Low_complexity 1 51 0 3 670 21 36 0 0 chr3L 11171711 11171739 -13371818 + AT_rich Low_complexity Low_complexity 1 28 0 3 670 24 106 0 0 chr3L 11175085 11175179 -13368378 + AT_rich Low_complexity Low_complexity 1 94 0 3 670 202 302 0 30 chr3L 11175346 11175445 -13368112 + (TTG)n Simple_repeat Simple_repeat 1 96 0 3 670 240 175 0 0 chr3L 11175584 11175647 -13367910 + (TTG)n Simple_repeat Simple_repeat 3 65 0 3 670 215 227 0 0 chr3L 11177361 11177405 -13366152 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 3 670 210 208 0 0 chr3L 11178495 11178548 -13365009 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 3 670 30 0 0 0 chr3L 11178962 11178992 -13364565 + AT_rich Low_complexity Low_complexity 1 30 0 3 670 31 0 0 0 chr3L 11180599 11180630 -13362927 + AT_rich Low_complexity Low_complexity 1 31 0 3 670 21 0 0 0 chr3L 11180788 11180809 -13362748 + AT_rich Low_complexity Low_complexity 1 21 0 3 670 204 40 0 0 chr3L 11185786 11185811 -13357746 + (TTCTG)n Simple_repeat Simple_repeat 4 28 0 3 670 25 0 0 0 chr3L 11186049 11186074 -13357483 + AT_rich Low_complexity Low_complexity 1 25 0 3 670 22 0 0 0 chr3L 11188734 11188756 -13354801 + AT_rich Low_complexity Low_complexity 1 22 0 3 670 39 38 0 0 chr3L 11189033 11189086 -13354471 + AT_rich Low_complexity Low_complexity 1 53 0 3 670 198 118 0 0 chr3L 11189891 11189925 -13353632 + (TTG)n Simple_repeat Simple_repeat 2 35 0 3 670 225 237 0 0 chr3L 11190136 11190195 -13353362 + GA-rich Low_complexity Low_complexity 1 59 0 3 670 208 147 0 0 chr3L 11190221 11190255 -13353302 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 670 25 83 0 0 chr3L 11190800 11190860 -13352697 + AT_rich Low_complexity Low_complexity 1 60 0 3 670 21 100 0 0 chr3L 11190916 11190986 -13352571 + AT_rich Low_complexity Low_complexity 1 70 0 3 670 28 29 0 0 chr3L 11193308 11193343 -13350214 + AT_rich Low_complexity Low_complexity 1 35 0 3 670 25 0 0 0 chr3L 11193663 11193688 -13349869 + AT_rich Low_complexity Low_complexity 1 25 0 3 670 195 100 0 0 chr3L 11194474 11194504 -13349053 + (CAG)n Simple_repeat Simple_repeat 1 30 0 3 670 24 32 0 0 chr3L 11195979 11196010 -13347547 + AT_rich Low_complexity Low_complexity 1 31 0 3 670 24 53 0 0 chr3L 11198154 11198192 -13345365 + AT_rich Low_complexity Low_complexity 1 38 0 3 670 22 80 0 0 chr3L 11199245 11199295 -13344262 + AT_rich Low_complexity Low_complexity 1 50 0 3 670 22 35 0 0 chr3L 11199373 11199402 -13344155 + AT_rich Low_complexity Low_complexity 1 29 0 3 670 27 29 0 0 chr3L 11199441 11199475 -13344082 + AT_rich Low_complexity Low_complexity 1 34 0 3 670 23 33 0 0 chr3L 11207377 11207407 -13336150 + AT_rich Low_complexity Low_complexity 1 30 0 3 670 315 0 0 0 chr3L 11208799 11208834 -13334723 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 670 183 129 0 0 chr3L 11209121 11209152 -13334405 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 670 255 305 0 0 chr3L 11209950 11210032 -13333525 + (CAG)n Simple_repeat Simple_repeat 1 82 0 3 670 207 100 0 0 chr3L 11213511 11213541 -13330016 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 670 206 172 62 0 chr3L 11215412 11215476 -13328081 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 670 24 0 0 0 chr3L 11215626 11215650 -13327907 + AT_rich Low_complexity Low_complexity 1 24 0 3 670 21 36 0 0 chr3L 11217728 11217756 -13325801 + AT_rich Low_complexity Low_complexity 1 28 0 3 670 21 0 0 0 chr3L 11220098 11220119 -13323438 + AT_rich Low_complexity Low_complexity 1 21 0 3 670 211 146 24 0 chr3L 11222505 11222546 -13321011 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 670 30 45 0 0 chr3L 11223636 11223680 -13319877 + AT_rich Low_complexity Low_complexity 1 44 0 3 670 21 71 0 0 chr3L 11224427 11224469 -13319088 + AT_rich Low_complexity Low_complexity 1 42 0 3 670 43 0 0 0 chr3L 11226640 11226683 -13316874 + AT_rich Low_complexity Low_complexity 1 43 0 3 670 35 78 0 0 chr3L 11228225 11228302 -13315255 + AT_rich Low_complexity Low_complexity 1 77 0 3 670 207 139 0 0 chr3L 11229185 11229221 -13314336 + (CAGT)n Simple_repeat Simple_repeat 3 38 0 3 670 216 0 0 0 chr3L 11229923 11229947 -13313610 + (ACCG)n Simple_repeat Simple_repeat 2 25 0 3 670 216 0 0 0 chr3L 11230112 11230136 -13313421 + (CAGTC)n Simple_repeat Simple_repeat 3 26 0 3 670 214 107 71 0 chr3L 11231015 11231071 -13312486 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 670 327 145 0 0 chr3L 11232383 11232452 -13311105 + (ATTCG)n Simple_repeat Simple_repeat 5 73 0 3 670 24 0 0 0 chr3L 11232831 11232855 -13310702 + AT_rich Low_complexity Low_complexity 1 24 0 3 670 324 120 0 0 chr3L 11232927 11232977 -13310580 + (TTTTA)n Simple_repeat Simple_repeat 2 51 0 3 670 240 224 0 0 chr3L 11233342 11233409 -13310148 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 670 29 0 0 0 chr3L 11233974 11234003 -13309554 + AT_rich Low_complexity Low_complexity 1 29 0 3 670 21 0 0 0 chr3L 11234191 11234212 -13309345 + AT_rich Low_complexity Low_complexity 1 21 0 3 670 21 36 0 0 chr3L 11234685 11234713 -13308844 + AT_rich Low_complexity Low_complexity 1 28 0 3 670 26 74 0 0 chr3L 11234917 11234971 -13308586 + AT_rich Low_complexity Low_complexity 1 54 0 3 670 273 162 0 0 chr3L 11235961 11236029 -13307528 + GA-rich Low_complexity Low_complexity 2 69 0 3 670 180 0 0 0 chr3L 11238108 11238128 -13305429 + (ATG)n Simple_repeat Simple_repeat 3 22 0 3 670 306 123 0 0 chr3L 11239220 11239277 -13304280 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 670 228 256 37 0 chr3L 11239313 11239395 -13304162 + (CAAA)n Simple_repeat Simple_repeat 2 86 0 3 670 328 158 13 13 chr3L 11239580 11239657 -13303900 + (CAA)n Simple_repeat Simple_repeat 1 77 0 3 670 209 205 0 0 chr3L 11240589 11240628 -13302929 + (TATG)n Simple_repeat Simple_repeat 2 40 0 3 670 22 35 0 0 chr3L 11244334 11244363 -13299194 + AT_rich Low_complexity Low_complexity 1 29 0 3 670 183 42 0 0 chr3L 11245126 11245150 -13298407 + (TTG)n Simple_repeat Simple_repeat 1 24 0 3 670 252 0 0 0 chr3L 11245728 11245756 -13297801 + (CCAA)n Simple_repeat Simple_repeat 1 28 0 3 670 21 0 0 0 chr3L 11246249 11246270 -13297287 + AT_rich Low_complexity Low_complexity 1 21 0 3 670 398 83 0 65 chr3L 11247729 11247806 -13295751 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 670 258 176 44 0 chr3L 11248190 11248283 -13295274 + (CA)n Simple_repeat Simple_repeat 1 97 0 3 670 43 71 0 0 chr3L 11248460 11248545 -13295012 + AT_rich Low_complexity Low_complexity 1 85 0 3 670 297 187 21 42 chr3L 11248563 11248658 -13294899 + A-rich Low_complexity Low_complexity 3 95 0 3 670 210 245 0 0 chr3L 11248990 11249039 -13294518 + GA-rich Low_complexity Low_complexity 4 52 0 3 670 31 82 0 0 chr3L 11249045 11249118 -13294439 + AT_rich Low_complexity Low_complexity 1 73 0 3 670 180 0 0 0 chr3L 11249155 11249175 -13294382 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 670 30 59 0 0 chr3L 11249655 11249706 -13293851 + AT_rich Low_complexity Low_complexity 1 51 0 3 670 23 0 0 0 chr3L 11250319 11250342 -13293215 + AT_rich Low_complexity Low_complexity 1 23 0 3 670 190 29 57 29 chr3L 11250396 11250431 -13293126 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 3 670 267 31 0 0 chr3L 11250940 11250972 -13292585 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 670 23 0 0 0 chr3L 11251826 11251849 -13291708 + AT_rich Low_complexity Low_complexity 1 23 0 3 670 22 70 0 0 chr3L 11254209 11254252 -13289305 + AT_rich Low_complexity Low_complexity 1 43 0 3 670 245 29 0 29 chr3L 11254380 11254415 -13289142 + (CAA)n Simple_repeat Simple_repeat 2 35 0 3 670 23 68 0 0 chr3L 11254621 11254665 -13288892 + AT_rich Low_complexity Low_complexity 1 44 0 3 670 215 203 17 0 chr3L 11254920 11254979 -13288578 + (CAA)n Simple_repeat Simple_repeat 2 61 0 3 670 29 0 0 0 chr3L 11255927 11255956 -13287601 + AT_rich Low_complexity Low_complexity 1 29 0 3 670 189 0 0 0 chr3L 11256179 11256200 -13287357 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 3 670 222 105 0 0 chr3L 11256907 11256945 -13286612 + (T)n Simple_repeat Simple_repeat 1 38 0 3 670 4503 4 0 0 chr3L 11257621 11258128 -13285429 - DM176_LTR LTR Gypsy 0 507 1 3 670 10716 6 4 8 chr3L 11258128 11259581 -13283976 - DM176_I LTR Gypsy 0 6420 4666 3 670 38021 1 0 14 chr3L 11259581 11264004 -13279553 - DM176_I LTR Gypsy -2058 4362 1 3 670 4503 4 0 0 chr3L 11264004 11264511 -13279046 - DM176_LTR LTR Gypsy 0 507 1 3 670 24 96 0 0 chr3L 11265854 11265927 -13277630 + AT_rich Low_complexity Low_complexity 1 73 0 3 670 220 136 0 64 chr3L 11266532 11266579 -13276978 - HSATII Satellite Satellite -102 68 25 3 670 23 68 0 0 chr3L 11268142 11268186 -13275371 + AT_rich Low_complexity Low_complexity 1 44 0 3 670 204 216 0 0 chr3L 11268787 11268838 -13274719 + (CATATA)n Simple_repeat Simple_repeat 1 51 0 3 670 27 0 0 0 chr3L 11268956 11268983 -13274574 + AT_rich Low_complexity Low_complexity 1 27 0 3 670 25 0 0 0 chr3L 11269609 11269634 -13273923 + AT_rich Low_complexity Low_complexity 1 25 0 3 670 8534 1 1 0 chr3L 11270614 11271550 -13272007 - DMRT1A LINE R1 -5 5178 4242 3 671 200 176 0 0 chr3L 11272735 11272769 -13270788 + (TATG)n Simple_repeat Simple_repeat 3 36 0 3 671 22 0 0 0 chr3L 11273290 11273312 -13270245 + AT_rich Low_complexity Low_complexity 1 22 0 3 671 218 167 0 0 chr3L 11273739 11273775 -13269782 + (CAGC)n Simple_repeat Simple_repeat 2 37 0 3 671 201 74 0 0 chr3L 11273835 11273862 -13269695 + (TTTCG)n Simple_repeat Simple_repeat 3 29 0 3 671 209 208 0 0 chr3L 11273926 11273974 -13269583 + T-rich Low_complexity Low_complexity 1 48 0 3 671 21 36 0 0 chr3L 11274422 11274450 -13269107 + AT_rich Low_complexity Low_complexity 1 28 0 3 671 38 22 0 0 chr3L 11274677 11274722 -13268835 + AT_rich Low_complexity Low_complexity 1 45 0 3 671 35 41 0 0 chr3L 11274765 11274814 -13268743 + AT_rich Low_complexity Low_complexity 1 49 0 3 671 213 39 0 0 chr3L 11274991 11275017 -13268540 + (TATG)n Simple_repeat Simple_repeat 2 27 0 3 671 21 36 0 0 chr3L 11275352 11275380 -13268177 + AT_rich Low_complexity Low_complexity 1 28 0 3 671 243 88 0 0 chr3L 11277055 11277089 -13266468 + (TTA)n Simple_repeat Simple_repeat 3 36 0 3 671 332 324 7 7 chr3L 11277582 11277636 -13265921 + (CAA)n Simple_repeat Simple_repeat 1 149 0 3 671 243 295 0 0 chr3L 11277636 11277731 -13265826 + ROO_I LTR Pao 638 732 -7524 3 671 258 337 6 22 chr3L 11277970 11278152 -13265405 + (CAA)n Simple_repeat Simple_repeat 2 180 0 3 671 24 53 0 0 chr3L 11278408 11278446 -13265111 + AT_rich Low_complexity Low_complexity 1 38 0 3 671 414 151 0 0 chr3L 11279013 11279086 -13264471 + (CATA)n Simple_repeat Simple_repeat 4 76 0 3 671 25 31 0 0 chr3L 11280064 11280096 -13263461 + AT_rich Low_complexity Low_complexity 1 32 0 3 671 21 0 0 0 chr3L 11280145 11280166 -13263391 + AT_rich Low_complexity Low_complexity 1 21 0 3 671 180 0 0 0 chr3L 11281291 11281311 -13262246 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 671 233 128 0 21 chr3L 11281465 11281513 -13262044 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 671 205 302 0 34 chr3L 11282187 11282276 -13261281 + (CTG)n Simple_repeat Simple_repeat 3 88 0 3 671 277 217 0 0 chr3L 11282332 11282424 -13261133 - ROO_I LTR Pao -7524 732 641 3 671 216 67 0 0 chr3L 11282517 11282547 -13261010 + (CTG)n Simple_repeat Simple_repeat 1 30 0 3 671 26 0 0 0 chr3L 11282899 11282925 -13260632 + AT_rich Low_complexity Low_complexity 1 26 0 3 671 183 80 0 0 chr3L 11285388 11285413 -13258144 + (TATG)n Simple_repeat Simple_repeat 4 28 0 3 671 29 28 0 0 chr3L 11285834 11285870 -13257687 + AT_rich Low_complexity Low_complexity 1 36 0 3 671 240 210 16 31 chr3L 11288217 11288314 -13255243 + (TTG)n Simple_repeat Simple_repeat 1 95 0 3 671 216 360 0 11 chr3L 11288390 11288570 -13254987 + (TTG)n Simple_repeat Simple_repeat 2 179 0 3 671 306 176 9 73 chr3L 11288715 11288825 -13254732 - ROO_I LTR Pao -7513 743 641 3 671 201 176 0 0 chr3L 11288966 11289000 -13254557 + (TTG)n Simple_repeat Simple_repeat 1 34 0 3 671 217 135 0 26 chr3L 11289088 11289126 -13254431 + (CTG)n Simple_repeat Simple_repeat 1 37 0 3 671 21 57 0 0 chr3L 11289497 11289532 -13254025 + AT_rich Low_complexity Low_complexity 1 35 0 3 671 183 259 0 0 chr3L 11289741 11289799 -13253758 + (TTG)n Simple_repeat Simple_repeat 1 58 0 3 671 22 35 0 0 chr3L 11290968 11290997 -13252560 + AT_rich Low_complexity Low_complexity 1 29 0 3 671 211 133 0 62 chr3L 11292465 11292513 -13251044 + T-rich Low_complexity Low_complexity 2 46 0 3 671 237 98 0 0 chr3L 11294381 11294422 -13249135 + (ATG)n Simple_repeat Simple_repeat 3 43 0 3 671 27 29 0 0 chr3L 11295403 11295437 -13248120 + AT_rich Low_complexity Low_complexity 1 34 0 3 671 201 233 0 0 chr3L 11295910 11295953 -13247604 + G-rich Low_complexity Low_complexity 6 48 0 3 671 261 197 0 0 chr3L 11298874 11298940 -13244617 + A-rich Low_complexity Low_complexity 1 66 0 3 671 189 121 0 0 chr3L 11303770 11303803 -13239754 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 671 208 206 32 0 chr3L 11304042 11304105 -13239452 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 671 257 269 0 0 chr3L 11304282 11304349 -13239208 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 671 24 32 0 0 chr3L 11305175 11305206 -13238351 + AT_rich Low_complexity Low_complexity 1 31 0 3 671 25 31 0 0 chr3L 11307566 11307598 -13235959 + AT_rich Low_complexity Low_complexity 1 32 0 3 671 23 0 0 0 chr3L 11307643 11307666 -13235891 + AT_rich Low_complexity Low_complexity 1 23 0 3 671 27 29 0 0 chr3L 11308969 11309003 -13234554 + AT_rich Low_complexity Low_complexity 1 34 0 3 671 180 135 0 0 chr3L 11311080 11311117 -13232440 + (GGAAA)n Simple_repeat Simple_repeat 1 37 0 3 671 180 0 0 0 chr3L 11311679 11311699 -13231858 + (CAT)n Simple_repeat Simple_repeat 2 21 0 3 671 234 91 0 0 chr3L 11313186 11313219 -13230338 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 671 28 0 0 0 chr3L 11315741 11315769 -13227788 + AT_rich Low_complexity Low_complexity 1 28 0 3 671 24 32 0 0 chr3L 11317290 11317321 -13226236 + AT_rich Low_complexity Low_complexity 1 31 0 3 671 220 292 12 36 chr3L 11317687 11317854 -13225703 + (TTG)n Simple_repeat Simple_repeat 3 165 0 3 671 202 244 0 0 chr3L 11318007 11318052 -13225505 + T-rich Low_complexity Low_complexity 1 45 0 3 671 183 100 0 0 chr3L 11319200 11319230 -13224327 + (T)n Simple_repeat Simple_repeat 1 30 0 3 671 233 271 0 0 chr3L 11322540 11322588 -13220969 + (CCCCAA)n Simple_repeat Simple_repeat 6 53 0 3 671 213 65 0 0 chr3L 11322665 11322696 -13220861 + (A)n Simple_repeat Simple_repeat 1 31 0 3 671 27259 3 0 2 chr3L 11322849 11325979 -13217578 + LINEJ1_DM LINE Jockey 1898 5020 0 3 671 21 57 0 0 chr3L 11327974 11328009 -13215548 + AT_rich Low_complexity Low_complexity 1 35 0 3 671 22 0 0 0 chr3L 11328689 11328711 -13214846 + AT_rich Low_complexity Low_complexity 1 22 0 3 671 240 122 0 0 chr3L 11329150 11329191 -13214366 + (A)n Simple_repeat Simple_repeat 1 41 0 3 671 215 178 22 0 chr3L 11329215 11329260 -13214297 + A-rich Low_complexity Low_complexity 3 48 0 3 671 180 0 0 0 chr3L 11329471 11329491 -13214066 + (TGGA)n Simple_repeat Simple_repeat 4 23 0 3 671 27 0 0 0 chr3L 11329570 11329597 -13213960 + AT_rich Low_complexity Low_complexity 1 27 0 3 671 201 261 0 0 chr3L 11330845 11330891 -13212666 + GA-rich Low_complexity Low_complexity 3 48 0 3 671 204 97 0 0 chr3L 11331500 11331531 -13212026 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 671 312 48 0 0 chr3L 11332781 11332823 -13210734 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 671 21 0 0 0 chr3L 11333212 11333233 -13210324 + AT_rich Low_complexity Low_complexity 1 21 0 3 671 24 32 0 0 chr3L 11336409 11336440 -13207117 + AT_rich Low_complexity Low_complexity 1 31 0 3 671 235 280 0 26 chr3L 11336883 11336960 -13206597 + (TTCGGG)n Simple_repeat Simple_repeat 4 78 0 3 671 27 0 0 0 chr3L 11338578 11338605 -13204952 + AT_rich Low_complexity Low_complexity 1 27 0 3 671 187 143 0 58 chr3L 11340860 11340912 -13202645 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 3 671 25 31 0 0 chr3L 11342392 11342424 -13201133 + AT_rich Low_complexity Low_complexity 1 32 0 3 671 25 31 0 0 chr3L 11342483 11342515 -13201042 + AT_rich Low_complexity Low_complexity 1 32 0 3 671 21 36 0 0 chr3L 11342567 11342595 -13200962 + AT_rich Low_complexity Low_complexity 1 28 0 3 671 213 94 0 0 chr3L 11342734 11342766 -13200791 + (CGAAA)n Simple_repeat Simple_repeat 5 36 0 3 671 189 74 0 0 chr3L 11342831 11342858 -13200699 + (CGATG)n Simple_repeat Simple_repeat 2 28 0 3 671 29 70 0 0 chr3L 11343857 11343914 -13199643 + AT_rich Low_complexity Low_complexity 1 57 0 3 671 223 225 38 0 chr3L 11346487 11346567 -13196990 + (CAA)n Simple_repeat Simple_repeat 1 83 0 3 671 207 278 0 0 chr3L 11347626 11347680 -13195877 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 3 671 182 91 0 29 chr3L 11348870 11348904 -13194653 + (CCGAA)n Simple_repeat Simple_repeat 3 35 0 3 671 207 0 0 0 chr3L 11350197 11350220 -13193337 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 671 23 33 0 0 chr3L 11352564 11352594 -13190963 + AT_rich Low_complexity Low_complexity 1 30 0 3 671 192 77 0 0 chr3L 11353272 11353298 -13190259 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 671 255 79 0 0 chr3L 11353414 11353452 -13190105 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 671 212 227 0 29 chr3L 11358854 11358922 -13184635 + (CAA)n Simple_repeat Simple_repeat 1 66 0 3 671 29 28 0 0 chr3L 11359415 11359451 -13184106 + AT_rich Low_complexity Low_complexity 1 36 0 3 671 211 184 0 0 chr3L 11359642 11359680 -13183877 + (CACG)n Simple_repeat Simple_repeat 4 41 0 3 671 250 267 0 13 chr3L 11361323 11361399 -13182158 + (CCCCAG)n Simple_repeat Simple_repeat 3 77 0 3 671 203 244 0 0 chr3L 11362911 11362952 -13180605 + (CAG)n Simple_repeat Simple_repeat 2 42 0 3 671 21 36 0 0 chr3L 11364734 11364762 -13178795 + AT_rich Low_complexity Low_complexity 1 28 0 3 671 22 35 0 0 chr3L 11365136 11365165 -13178392 + AT_rich Low_complexity Low_complexity 1 29 0 3 671 21 0 0 0 chr3L 11366135 11366156 -13177401 + AT_rich Low_complexity Low_complexity 1 21 0 3 671 222 118 0 0 chr3L 11366508 11366542 -13177015 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 671 243 129 31 31 chr3L 11367087 11367151 -13176406 + (TTTA)n Simple_repeat Simple_repeat 4 67 0 3 671 182 150 0 24 chr3L 11367529 11367570 -13175987 + (CATA)n Simple_repeat Simple_repeat 2 41 0 3 671 234 116 0 0 chr3L 11368196 11368239 -13175318 + (CGAAT)n Simple_repeat Simple_repeat 3 45 0 3 671 37 0 0 0 chr3L 11371458 11371495 -13172062 + AT_rich Low_complexity Low_complexity 1 37 0 3 671 21 71 0 0 chr3L 11373008 11373050 -13170507 + AT_rich Low_complexity Low_complexity 1 42 0 3 671 24 0 0 0 chr3L 11375426 11375450 -13168107 + AT_rich Low_complexity Low_complexity 1 24 0 3 671 228 86 0 0 chr3L 11377227 11377262 -13166295 + (TCCA)n Simple_repeat Simple_repeat 1 35 0 3 671 204 40 0 0 chr3L 11377508 11377533 -13166024 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 671 24 0 0 0 chr3L 11378447 11378471 -13165086 + AT_rich Low_complexity Low_complexity 1 24 0 3 671 211 264 0 0 chr3L 11378929 11378982 -13164575 + (CGGA)n Simple_repeat Simple_repeat 3 55 0 3 671 194 136 0 22 chr3L 11379226 11379271 -13164286 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 671 288 0 0 0 chr3L 11380021 11380053 -13163504 + (CAG)n Simple_repeat Simple_repeat 3 34 0 3 671 246 32 0 0 chr3L 11380315 11380346 -13163211 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 671 180 0 0 0 chr3L 11382977 11382997 -13160560 + (G)n Simple_repeat Simple_repeat 1 20 0 3 671 269 298 19 19 chr3L 11383807 11383913 -13159644 + (CCCGAA)n Simple_repeat Simple_repeat 6 111 0 3 671 377 308 9 18 chr3L 11383947 11384056 -13159501 + G-rich Low_complexity Low_complexity 5 112 0 3 671 21 0 0 0 chr3L 11384845 11384866 -13158691 + AT_rich Low_complexity Low_complexity 1 21 0 3 671 30 69 0 0 chr3L 11386631 11386689 -13156868 + AT_rich Low_complexity Low_complexity 1 58 0 3 671 237 296 0 0 chr3L 11391019 11391090 -13152467 + (ACTG)n Simple_repeat Simple_repeat 2 72 0 3 671 297 75 0 0 chr3L 11394913 11394953 -13148604 + (CAATC)n Simple_repeat Simple_repeat 5 44 0 3 671 243 204 0 0 chr3L 11395271 11395325 -13148232 + (CGGA)n Simple_repeat Simple_repeat 4 57 0 3 671 227 116 0 44 chr3L 11396484 11396529 -13147028 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 3 671 201 162 0 0 chr3L 11397142 11397179 -13146378 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 671 263 214 0 0 chr3L 11398584 11398668 -13144889 + ROO_I LTR Pao 649 732 -7524 3 671 23 0 0 0 chr3L 11400549 11400572 -13142985 + AT_rich Low_complexity Low_complexity 1 23 0 3 671 25 108 0 0 chr3L 11402988 11403090 -13140467 + AT_rich Low_complexity Low_complexity 1 102 0 3 671 31 0 0 0 chr3L 11403100 11403131 -13140426 + AT_rich Low_complexity Low_complexity 1 31 0 3 672 23 68 0 0 chr3L 11403701 11403745 -13139812 + AT_rich Low_complexity Low_complexity 1 44 0 3 672 29 0 0 0 chr3L 11404692 11404721 -13138836 + AT_rich Low_complexity Low_complexity 1 29 0 3 672 213 39 0 0 chr3L 11406162 11406188 -13137369 + (CGAAT)n Simple_repeat Simple_repeat 2 27 0 3 672 218 293 27 0 chr3L 11406643 11406718 -13136839 + (CAA)n Simple_repeat Simple_repeat 2 78 0 3 672 43 47 0 0 chr3L 11410792 11410856 -13132701 + AT_rich Low_complexity Low_complexity 1 64 0 3 672 277 230 34 11 chr3L 11411304 11411392 -13132165 + (CAGT)n Simple_repeat Simple_repeat 4 93 0 3 672 286 188 0 48 chr3L 11411785 11411869 -13131688 + (TA)n Simple_repeat Simple_repeat 1 80 0 3 672 180 152 0 0 chr3L 11419967 11420000 -13123557 + C-rich Low_complexity Low_complexity 3 35 0 3 672 49 43 0 0 chr3L 11420120 11420190 -13123367 + AT_rich Low_complexity Low_complexity 1 70 0 3 672 26 93 0 0 chr3L 11420895 11420970 -13122587 + AT_rich Low_complexity Low_complexity 1 75 0 3 672 23 33 0 0 chr3L 11421356 11421386 -13122171 + AT_rich Low_complexity Low_complexity 1 30 0 3 672 21 0 0 0 chr3L 11421467 11421488 -13122069 + AT_rich Low_complexity Low_complexity 1 21 0 3 672 27 0 0 0 chr3L 11421855 11421882 -13121675 + AT_rich Low_complexity Low_complexity 1 27 0 3 672 27 29 0 0 chr3L 11421914 11421948 -13121609 + AT_rich Low_complexity Low_complexity 1 34 0 3 672 21 0 0 0 chr3L 11422427 11422448 -13121109 + AT_rich Low_complexity Low_complexity 1 21 0 3 672 27 29 0 0 chr3L 11424817 11424851 -13118706 + AT_rich Low_complexity Low_complexity 1 34 0 3 672 225 191 0 0 chr3L 11425363 11425410 -13118147 + A-rich Low_complexity Low_complexity 1 47 0 3 672 22 0 0 0 chr3L 11425589 11425611 -13117946 + AT_rich Low_complexity Low_complexity 1 22 0 3 672 29 70 0 0 chr3L 11429274 11429331 -13114226 + AT_rich Low_complexity Low_complexity 1 57 0 3 672 225 94 0 0 chr3L 11432652 11432684 -13110873 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 672 24 77 0 0 chr3L 11432805 11432857 -13110700 + AT_rich Low_complexity Low_complexity 1 52 0 3 672 39 68 0 0 chr3L 11434285 11434359 -13109198 + AT_rich Low_complexity Low_complexity 1 74 0 3 672 27 96 0 0 chr3L 11434430 11434513 -13109044 + AT_rich Low_complexity Low_complexity 1 83 0 3 672 216 97 0 0 chr3L 11435549 11435580 -13107977 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 672 208 143 0 0 chr3L 11435663 11435698 -13107859 + (A)n Simple_repeat Simple_repeat 1 35 0 3 672 38 39 0 0 chr3L 11436798 11436850 -13106707 + AT_rich Low_complexity Low_complexity 1 52 0 3 672 26 0 0 0 chr3L 11436866 11436892 -13106665 + AT_rich Low_complexity Low_complexity 1 26 0 3 672 40 37 0 0 chr3L 11437445 11437499 -13106058 + AT_rich Low_complexity Low_complexity 1 54 0 3 672 294 302 12 30 chr3L 11437664 11437828 -13105729 + (GCTTG)n Simple_repeat Simple_repeat 5 165 0 3 672 213 94 0 0 chr3L 11440887 11440919 -13102638 + (T)n Simple_repeat Simple_repeat 1 32 0 3 672 195 129 0 0 chr3L 11443256 11443287 -13100270 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 672 44 70 0 0 chr3L 11443734 11443820 -13099737 + AT_rich Low_complexity Low_complexity 1 86 0 3 672 27 0 0 0 chr3L 11444566 11444593 -13098964 + AT_rich Low_complexity Low_complexity 1 27 0 3 672 192 152 0 0 chr3L 11445640 11445673 -13097884 + (TTCGGG)n Simple_repeat Simple_repeat 6 38 0 3 672 212 208 0 70 chr3L 11447743 11447800 -13095757 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 672 31 58 0 0 chr3L 11448635 11448687 -13094870 + AT_rich Low_complexity Low_complexity 1 52 0 3 672 26 0 0 0 chr3L 11451621 11451647 -13091910 + AT_rich Low_complexity Low_complexity 1 26 0 3 672 21 36 0 0 chr3L 11453326 11453354 -13090203 + AT_rich Low_complexity Low_complexity 1 28 0 3 672 24 53 0 0 chr3L 11454034 11454072 -13089485 + AT_rich Low_complexity Low_complexity 1 38 0 3 672 25 31 0 0 chr3L 11457141 11457173 -13086384 + AT_rich Low_complexity Low_complexity 1 32 0 3 672 237 83 0 0 chr3L 11459983 11460019 -13083538 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 672 30 0 0 0 chr3L 11460295 11460325 -13083232 + AT_rich Low_complexity Low_complexity 1 30 0 3 672 37 23 0 0 chr3L 11460370 11460414 -13083143 + AT_rich Low_complexity Low_complexity 1 44 0 3 672 22 0 0 0 chr3L 11460681 11460703 -13082854 + AT_rich Low_complexity Low_complexity 1 22 0 3 672 29 0 0 0 chr3L 11461615 11461644 -13081913 + AT_rich Low_complexity Low_complexity 1 29 0 3 672 371 88 0 29 chr3L 11462424 11462494 -13081063 + (CAGT)n Simple_repeat Simple_repeat 4 71 0 3 672 32 0 0 0 chr3L 11467880 11467912 -13075645 + AT_rich Low_complexity Low_complexity 1 32 0 3 672 21 57 0 0 chr3L 11468575 11468610 -13074947 + AT_rich Low_complexity Low_complexity 1 35 0 3 672 50 34 0 33 chr3L 11468624 11468714 -13074843 + AT_rich Low_complexity Low_complexity 1 87 0 3 672 195 42 0 0 chr3L 11470027 11470051 -13073506 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 3 672 29 0 0 0 chr3L 11470603 11470632 -13072925 + AT_rich Low_complexity Low_complexity 1 29 0 3 672 25 0 0 0 chr3L 11472072 11472097 -13071460 + AT_rich Low_complexity Low_complexity 1 25 0 3 672 27 29 0 0 chr3L 11472207 11472241 -13071316 + AT_rich Low_complexity Low_complexity 1 34 0 3 672 180 125 0 0 chr3L 11472295 11472327 -13071230 + (CACAG)n Simple_repeat Simple_repeat 4 35 0 3 672 22 0 0 0 chr3L 11472608 11472630 -13070927 + AT_rich Low_complexity Low_complexity 1 22 0 3 672 22 80 0 0 chr3L 11473308 11473358 -13070199 + AT_rich Low_complexity Low_complexity 1 50 0 3 672 194 143 20 0 chr3L 11473850 11473899 -13069658 + (CAACC)n Simple_repeat Simple_repeat 3 52 0 3 672 23 0 0 0 chr3L 11475421 11475444 -13068113 + AT_rich Low_complexity Low_complexity 1 23 0 3 672 214 244 0 0 chr3L 11477215 11477256 -13066301 + (CCA)n Simple_repeat Simple_repeat 2 42 0 3 672 225 236 0 18 chr3L 11479871 11479927 -13063630 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 672 28 0 0 0 chr3L 11483243 11483271 -13060286 + AT_rich Low_complexity Low_complexity 1 28 0 3 672 258 56 0 0 chr3L 11484206 11484242 -13059315 + (CATA)n Simple_repeat Simple_repeat 1 36 0 3 672 186 189 0 0 chr3L 11484954 11484991 -13058566 + (CATA)n Simple_repeat Simple_repeat 2 38 0 3 672 225 308 0 0 chr3L 11485226 11485291 -13058266 + (CATA)n Simple_repeat Simple_repeat 3 67 0 3 672 204 200 0 43 chr3L 11485351 11485398 -13058159 + (CATA)n Simple_repeat Simple_repeat 3 47 0 3 672 222 204 0 0 chr3L 11486644 11486688 -13056869 + GA-rich Low_complexity Low_complexity 2 45 0 3 672 22 56 0 0 chr3L 11487101 11487137 -13056420 + AT_rich Low_complexity Low_complexity 1 36 0 3 672 200 79 0 50 chr3L 11488483 11488523 -13055034 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 3 672 24 32 0 0 chr3L 11489362 11489393 -13054164 + AT_rich Low_complexity Low_complexity 1 31 0 3 672 25 0 0 0 chr3L 11489923 11489948 -13053609 + AT_rich Low_complexity Low_complexity 1 25 0 3 672 21 71 0 0 chr3L 11490652 11490694 -13052863 + AT_rich Low_complexity Low_complexity 1 42 0 3 672 198 71 0 0 chr3L 11491488 11491516 -13052041 + (A)n Simple_repeat Simple_repeat 1 28 0 3 672 32 43 0 0 chr3L 11492164 11492210 -13051347 + AT_rich Low_complexity Low_complexity 1 46 0 3 672 3766 0 0 0 chr3L 11492211 11492639 -13050918 - ROO_LTR LTR Pao 0 428 1 3 672 62925 0 0 0 chr3L 11492639 11500000 -13043557 - ROO_I LTR Pao 0 8256 895 3 672 7835 1 12 1 chr3L 11500000 11500884 -13042673 - ROO_I LTR Pao -7362 894 1 3 672 4006 2 0 0 chr3L 11500884 11501312 -13042245 - ROO_LTR LTR Pao 0 428 1 3 672 2628 0 0 0 chr3L 11501723 11502008 -13041549 - DMRPR Unknown Unknown 0 285 1 3 672 22 80 0 0 chr3L 11502751 11502801 -13040756 + AT_rich Low_complexity Low_complexity 1 50 0 3 672 2217 61 0 0 chr3L 11503417 11503697 -13039860 + DMRPR Unknown Unknown 1 280 -5 3 672 27 0 0 0 chr3L 11504254 11504281 -13039276 + AT_rich Low_complexity Low_complexity 1 27 0 3 672 21 0 0 0 chr3L 11504719 11504740 -13038817 + AT_rich Low_complexity Low_complexity 1 21 0 3 672 425 81 65 0 chr3L 11504812 11504874 -13038683 - DNAREP1_DM LINE Penelope 0 594 529 3 672 473 80 74 30 chr3L 11504861 11504948 -13038609 - DNAREP1_DM LINE Penelope -105 489 436 3 672 415 167 132 23 chr3L 11504944 11505152 -13038405 - DNAREP1_DM LINE Penelope -301 293 1 3 672 193 177 0 71 chr3L 11505669 11505754 -13037803 + (CCA)n Simple_repeat Simple_repeat 3 81 0 3 672 265 111 0 145 chr3L 11505834 11506129 -13037428 + (CCA)n Simple_repeat Simple_repeat 1 252 0 3 672 204 40 0 0 chr3L 11507044 11507069 -13036488 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 672 204 125 0 0 chr3L 11509396 11509428 -13034129 + (TAA)n Simple_repeat Simple_repeat 1 32 0 3 672 29 0 0 0 chr3L 11509690 11509719 -13033838 + AT_rich Low_complexity Low_complexity 1 29 0 3 672 38 0 0 0 chr3L 11511963 11512001 -13031556 + AT_rich Low_complexity Low_complexity 1 38 0 3 672 189 74 0 0 chr3L 11514896 11514923 -13028634 + (TGG)n Simple_repeat Simple_repeat 1 27 0 3 672 198 0 0 0 chr3L 11516036 11516058 -13027499 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 3 672 21 36 0 0 chr3L 11517429 11517457 -13026100 + AT_rich Low_complexity Low_complexity 1 28 0 3 672 243 88 0 0 chr3L 11517525 11517559 -13025998 + (CTG)n Simple_repeat Simple_repeat 2 35 0 3 672 237 180 0 0 chr3L 11517706 11517756 -13025801 + (ATGGTG)n Simple_repeat Simple_repeat 5 54 0 3 672 241 127 18 0 chr3L 11518125 11518180 -13025377 - ROO_I LTR Pao -7536 720 665 3 672 264 154 0 0 chr3L 11520719 11520771 -13022786 + (TTG)n Simple_repeat Simple_repeat 1 52 0 3 672 21 0 0 0 chr3L 11524019 11524040 -13019517 + AT_rich Low_complexity Low_complexity 1 21 0 3 672 210 171 0 0 chr3L 11526158 11526199 -13017358 + (CATA)n Simple_repeat Simple_repeat 4 44 0 3 672 24 67 0 0 chr3L 11526612 11526657 -13016900 + AT_rich Low_complexity Low_complexity 1 45 0 3 672 23 0 0 0 chr3L 11527529 11527552 -13016005 + AT_rich Low_complexity Low_complexity 1 23 0 3 672 24 32 0 0 chr3L 11528176 11528207 -13015350 + AT_rich Low_complexity Low_complexity 1 31 0 3 672 303 212 0 0 chr3L 11531899 11531979 -13011578 + (CAGT)n Simple_repeat Simple_repeat 3 82 0 3 672 225 191 0 0 chr3L 11533967 11534014 -13009543 + A-rich Low_complexity Low_complexity 1 47 0 3 673 330 147 0 0 chr3L 11535004 11535072 -13008485 + (TTG)n Simple_repeat Simple_repeat 1 68 0 3 673 237 257 0 0 chr3L 11535253 11535327 -13008230 - ROO_I LTR Pao -7527 729 656 3 673 290 141 0 25 chr3L 11535631 11535711 -13007846 - ROO_I LTR Pao -7528 728 651 3 673 33 0 0 0 chr3L 11538753 11538786 -13004771 + AT_rich Low_complexity Low_complexity 1 33 0 3 673 221 314 0 0 chr3L 11540191 11540261 -13003296 + (TGAG)n Simple_repeat Simple_repeat 4 73 0 3 673 245 185 0 0 chr3L 11540536 11540590 -13002967 - ROO_I LTR Pao -7530 726 673 3 673 201 74 0 0 chr3L 11542733 11542760 -13000797 + (A)n Simple_repeat Simple_repeat 1 27 0 3 673 214 211 19 0 chr3L 11544199 11544251 -12999306 + (GTTTG)n Simple_repeat Simple_repeat 5 57 0 3 673 222 91 0 0 chr3L 11545673 11545706 -12997851 + (CTG)n Simple_repeat Simple_repeat 3 35 0 3 673 239 176 0 0 chr3L 11546396 11546447 -12997110 - ROO_I LTR Pao -7512 744 694 3 673 22 0 0 0 chr3L 11547666 11547688 -12995869 + AT_rich Low_complexity Low_complexity 1 22 0 3 673 261 212 80 34 chr3L 11549480 11549568 -12993989 - ROO_I LTR Pao -7519 737 646 3 673 225 163 0 0 chr3L 11550532 11550581 -12992976 + GA-rich Low_complexity Low_complexity 1 49 0 3 673 207 0 0 0 chr3L 11550617 11550640 -12992917 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 673 26 0 0 0 chr3L 11551140 11551166 -12992391 + AT_rich Low_complexity Low_complexity 1 26 0 3 673 24 0 0 0 chr3L 11552513 11552537 -12991020 + AT_rich Low_complexity Low_complexity 1 24 0 3 673 201 204 23 0 chr3L 11554267 11554311 -12989246 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 673 213 39 0 0 chr3L 11555147 11555173 -12988384 + (CACG)n Simple_repeat Simple_repeat 4 29 0 3 673 23 33 0 0 chr3L 11557397 11557427 -12986130 + AT_rich Low_complexity Low_complexity 1 30 0 3 673 21 57 0 0 chr3L 11557445 11557480 -12986077 + AT_rich Low_complexity Low_complexity 1 35 0 3 673 61845 1 1 15 chr3L 11557935 11565503 -12978054 + DM412 LTR Gypsy 1 6897 0 3 673 22 56 0 0 chr3L 11565875 11565911 -12977646 + AT_rich Low_complexity Low_complexity 1 36 0 3 673 22 56 0 0 chr3L 11568735 11568771 -12974786 + AT_rich Low_complexity Low_complexity 1 36 0 3 673 300 240 0 0 chr3L 11569234 11569334 -12974223 + (CAGA)n Simple_repeat Simple_repeat 4 103 0 3 673 26 0 0 0 chr3L 11569973 11569999 -12973558 + AT_rich Low_complexity Low_complexity 1 26 0 3 673 2084 70 0 0 chr3L 11570269 11570539 -12973018 + DMRPR Unknown Unknown 7 276 -9 3 673 25 0 0 0 chr3L 11571122 11571147 -12972410 + AT_rich Low_complexity Low_complexity 1 25 0 3 673 21 57 0 0 chr3L 11571301 11571336 -12972221 + AT_rich Low_complexity Low_complexity 1 35 0 3 673 2105 67 0 0 chr3L 11571387 11571657 -12971900 + DMRPR Unknown Unknown 7 276 -9 3 673 46 97 0 0 chr3L 11573363 11573507 -12970050 + AT_rich Low_complexity Low_complexity 1 144 0 3 673 24 53 0 0 chr3L 11574495 11574533 -12969024 + AT_rich Low_complexity Low_complexity 1 38 0 3 673 310 196 0 0 chr3L 11574540 11574596 -12968961 + DNAREP1_DM LINE Penelope 1 56 -538 3 673 2075 70 0 4 chr3L 11574950 11575222 -12968335 + DMRPR Unknown Unknown 7 277 -8 3 673 22 80 0 0 chr3L 11581585 11581635 -12961922 + AT_rich Low_complexity Low_complexity 1 50 0 3 673 283 252 10 10 chr3L 11582866 11582970 -12960587 + (CCA)n Simple_repeat Simple_repeat 3 106 0 3 673 39 22 0 0 chr3L 11583317 11583363 -12960194 + AT_rich Low_complexity Low_complexity 1 46 0 3 673 222 118 39 19 chr3L 11583396 11583448 -12960109 + (TAA)n Simple_repeat Simple_repeat 3 55 0 3 673 27 29 0 0 chr3L 11583612 11583646 -12959911 + AT_rich Low_complexity Low_complexity 1 34 0 3 673 28 61 0 0 chr3L 11583870 11583919 -12959638 + AT_rich Low_complexity Low_complexity 1 49 0 3 673 264 289 0 0 chr3L 11584146 11584250 -12959307 + (TGG)n Simple_repeat Simple_repeat 3 106 0 3 673 25 51 0 0 chr3L 11586376 11586415 -12957142 + AT_rich Low_complexity Low_complexity 1 39 0 3 673 29 28 0 0 chr3L 11586777 11586813 -12956744 + AT_rich Low_complexity Low_complexity 1 36 0 3 673 208 262 0 15 chr3L 11587513 11587579 -12955978 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 673 29 0 0 0 chr3L 11589099 11589128 -12954429 + AT_rich Low_complexity Low_complexity 1 29 0 3 673 207 100 0 0 chr3L 11590014 11590044 -12953513 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 673 202 189 0 0 chr3L 11590309 11590346 -12953211 + (CGAAT)n Simple_repeat Simple_repeat 5 41 0 3 673 25 65 0 0 chr3L 11590876 11590922 -12952635 + AT_rich Low_complexity Low_complexity 1 46 0 3 673 30 0 0 0 chr3L 11590965 11590995 -12952562 + AT_rich Low_complexity Low_complexity 1 30 0 3 673 200 231 0 0 chr3L 11592226 11592265 -12951292 + (ATG)n Simple_repeat Simple_repeat 1 39 0 3 673 31 58 0 0 chr3L 11592604 11592656 -12950901 + AT_rich Low_complexity Low_complexity 1 52 0 3 673 32 98 0 0 chr3L 11594008 11594110 -12949447 + AT_rich Low_complexity Low_complexity 1 102 0 3 673 225 131 0 47 chr3L 11595959 11596023 -12947534 + (CAG)n Simple_repeat Simple_repeat 3 63 0 3 673 213 121 0 0 chr3L 11596146 11596179 -12947378 + (CAG)n Simple_repeat Simple_repeat 1 33 0 3 673 237 83 0 0 chr3L 11596260 11596296 -12947261 + (CAG)n Simple_repeat Simple_repeat 1 36 0 3 673 183 156 0 0 chr3L 11596801 11596833 -12946724 + (CGA)n Simple_repeat Simple_repeat 3 34 0 3 673 350 143 0 0 chr3L 11597407 11597477 -12946080 + ROO_I LTR Pao 665 734 -7522 3 673 212 95 0 67 chr3L 11597511 11597556 -12946001 + (CAG)n Simple_repeat Simple_repeat 3 44 0 3 673 194 0 0 37 chr3L 11602905 11602932 -12940625 + (TTA)n Simple_repeat Simple_repeat 1 26 0 3 673 35 41 0 0 chr3L 11602972 11603021 -12940536 + AT_rich Low_complexity Low_complexity 1 49 0 3 673 22 0 0 0 chr3L 11616745 11616767 -12926790 + AT_rich Low_complexity Low_complexity 1 22 0 3 673 27 49 0 0 chr3L 11617650 11617691 -12925866 + AT_rich Low_complexity Low_complexity 1 41 0 3 673 23 0 0 0 chr3L 11617810 11617833 -12925724 + AT_rich Low_complexity Low_complexity 1 23 0 3 673 33 56 0 0 chr3L 11619402 11619456 -12924101 + AT_rich Low_complexity Low_complexity 1 54 0 3 673 23 33 0 0 chr3L 11624285 11624315 -12919242 + AT_rich Low_complexity Low_complexity 1 30 0 3 673 24 0 0 0 chr3L 11625294 11625318 -12918239 + AT_rich Low_complexity Low_complexity 1 24 0 3 673 245 293 16 39 chr3L 11627779 11627907 -12915650 + A-rich Low_complexity Low_complexity 1 125 0 3 673 189 0 0 0 chr3L 11630434 11630455 -12913102 + (CAT)n Simple_repeat Simple_repeat 2 22 0 3 673 21 0 0 0 chr3L 11632879 11632900 -12910657 + AT_rich Low_complexity Low_complexity 1 21 0 3 673 188 170 19 0 chr3L 11643694 11643747 -12899810 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 673 35 88 0 0 chr3L 11644473 11644564 -12898993 + AT_rich Low_complexity Low_complexity 1 91 0 3 673 24 53 0 0 chr3L 11645054 11645092 -12898465 + AT_rich Low_complexity Low_complexity 1 38 0 3 673 24 67 0 0 chr3L 11646680 11646725 -12896832 + AT_rich Low_complexity Low_complexity 1 45 0 3 673 30 0 0 0 chr3L 11650331 11650361 -12893196 + AT_rich Low_complexity Low_complexity 1 30 0 3 673 22 0 0 0 chr3L 11652498 11652520 -12891037 + AT_rich Low_complexity Low_complexity 1 22 0 3 673 21 36 0 0 chr3L 11656971 11656999 -12886558 + AT_rich Low_complexity Low_complexity 1 28 0 3 673 222 128 0 0 chr3L 11657464 11657503 -12886054 + (CAGT)n Simple_repeat Simple_repeat 3 41 0 3 673 33 66 0 0 chr3L 11657687 11657748 -12885809 + AT_rich Low_complexity Low_complexity 1 61 0 3 673 180 77 0 0 chr3L 11658888 11658914 -12884643 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 3 673 21 0 0 0 chr3L 11659066 11659087 -12884470 + AT_rich Low_complexity Low_complexity 1 21 0 3 673 234 0 0 0 chr3L 11664082 11664108 -12879449 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 673 22 56 0 0 chr3L 11664272 11664308 -12879249 + AT_rich Low_complexity Low_complexity 1 36 0 3 673 25 0 0 0 chr3L 11664429 11664454 -12879103 + AT_rich Low_complexity Low_complexity 1 25 0 3 673 231 125 0 0 chr3L 11664998 11665038 -12878519 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 674 268 229 0 0 chr3L 11668084 11668154 -12875403 - ROO_I LTR Pao -7541 715 646 3 674 22 0 0 0 chr3L 11671206 11671228 -12872329 + AT_rich Low_complexity Low_complexity 1 22 0 3 674 48 43 0 0 chr3L 11672224 11672293 -12871264 + AT_rich Low_complexity Low_complexity 1 69 0 3 674 23 78 0 0 chr3L 11673826 11673877 -12869680 + AT_rich Low_complexity Low_complexity 1 51 0 3 674 198 236 0 0 chr3L 11677848 11677903 -12865654 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 3 674 24 32 0 0 chr3L 11682147 11682178 -12861379 + AT_rich Low_complexity Low_complexity 1 31 0 3 674 24 32 0 0 chr3L 11682734 11682765 -12860792 + AT_rich Low_complexity Low_complexity 1 31 0 3 674 192 40 0 0 chr3L 11682931 11682956 -12860601 + (TTA)n Simple_repeat Simple_repeat 3 27 0 3 674 37 52 0 0 chr3L 11686679 11686737 -12856820 + AT_rich Low_complexity Low_complexity 1 58 0 3 674 25 31 0 0 chr3L 11686910 11686942 -12856615 + AT_rich Low_complexity Low_complexity 1 32 0 3 674 24 32 0 0 chr3L 11688816 11688847 -12854710 + AT_rich Low_complexity Low_complexity 1 31 0 3 674 225 267 29 29 chr3L 11700966 11701070 -12842487 + A-rich Low_complexity Low_complexity 6 109 0 3 674 30 59 0 0 chr3L 11701823 11701874 -12841683 + AT_rich Low_complexity Low_complexity 1 51 0 3 674 22 35 0 0 chr3L 11705509 11705538 -12838019 + AT_rich Low_complexity Low_complexity 1 29 0 3 674 180 77 0 0 chr3L 11705587 11705613 -12837944 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 674 180 111 0 0 chr3L 11711336 11711363 -12832194 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 674 21 0 0 0 chr3L 11713540 11713561 -12829996 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 27 62 0 0 chr3L 11713683 11713731 -12829826 + AT_rich Low_complexity Low_complexity 1 48 0 3 674 43508 1 0 0 chr3L 11716255 11720972 -12822585 + DOC LINE Jockey 10 4724 -1 3 674 21 57 0 0 chr3L 11722331 11722366 -12821191 + AT_rich Low_complexity Low_complexity 1 35 0 3 674 21 36 0 0 chr3L 11726692 11726720 -12816837 + AT_rich Low_complexity Low_complexity 1 28 0 3 674 32 0 0 0 chr3L 11728308 11728340 -12815217 + AT_rich Low_complexity Low_complexity 1 32 0 3 674 25 31 0 0 chr3L 11733034 11733066 -12810491 + AT_rich Low_complexity Low_complexity 1 32 0 3 674 202 214 0 0 chr3L 11735043 11735085 -12808472 + CT-rich Low_complexity Low_complexity 4 45 0 3 674 21 0 0 0 chr3L 11735793 11735814 -12807743 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 29 0 0 0 chr3L 11737407 11737436 -12806121 + AT_rich Low_complexity Low_complexity 1 29 0 3 674 23 0 0 0 chr3L 11740969 11740992 -12802565 + AT_rich Low_complexity Low_complexity 1 23 0 3 674 27 62 0 0 chr3L 11746429 11746477 -12797080 + AT_rich Low_complexity Low_complexity 1 48 0 3 674 218 155 35 0 chr3L 11747111 11747169 -12796388 + T-rich Low_complexity Low_complexity 4 63 0 3 674 267 175 0 0 chr3L 11747388 11747445 -12796112 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 674 21 0 0 0 chr3L 11751494 11751515 -12792042 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 189 74 0 0 chr3L 11756013 11756040 -12787517 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 674 243 143 129 21 chr3L 11756389 11756482 -12787075 + (TCCG)n Simple_repeat Simple_repeat 1 103 0 3 674 183 184 0 0 chr3L 11756543 11756581 -12786976 + (CAA)n Simple_repeat Simple_repeat 1 38 0 3 674 23 68 0 0 chr3L 11756900 11756944 -12786613 + AT_rich Low_complexity Low_complexity 1 44 0 3 674 22 0 0 0 chr3L 11757385 11757407 -12786150 + AT_rich Low_complexity Low_complexity 1 22 0 3 674 23 0 0 0 chr3L 11757684 11757707 -12785850 + AT_rich Low_complexity Low_complexity 1 23 0 3 674 222 156 0 0 chr3L 11758022 11758067 -12785490 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 674 23 33 0 0 chr3L 11759469 11759499 -12784058 + AT_rich Low_complexity Low_complexity 1 30 0 3 674 21 0 0 0 chr3L 11766252 11766273 -12777284 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 215 213 0 0 chr3L 11770532 11770579 -12772978 + (CAG)n Simple_repeat Simple_repeat 3 49 0 3 674 21 0 0 0 chr3L 11779868 11779889 -12763668 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 26 0 0 0 chr3L 11781820 11781846 -12761711 + AT_rich Low_complexity Low_complexity 1 26 0 3 674 37 62 0 0 chr3L 11786536 11786601 -12756956 + AT_rich Low_complexity Low_complexity 1 65 0 3 674 21 36 0 0 chr3L 11793595 11793623 -12749934 + AT_rich Low_complexity Low_complexity 1 28 0 3 674 29 47 0 0 chr3L 11793702 11793745 -12749812 + AT_rich Low_complexity Low_complexity 1 43 0 3 674 31 26 0 0 chr3L 11794521 11794559 -12748998 + AT_rich Low_complexity Low_complexity 1 38 0 3 674 33 73 0 0 chr3L 11794831 11794899 -12748658 + AT_rich Low_complexity Low_complexity 1 68 0 3 675 35 24 0 0 chr3L 11798928 11798970 -12744587 + AT_rich Low_complexity Low_complexity 1 42 0 3 675 24 0 0 0 chr3L 11801978 11802002 -12741555 + AT_rich Low_complexity Low_complexity 1 24 0 3 675 184 72 47 23 chr3L 11803686 11803729 -12739828 + (TTAA)n Simple_repeat Simple_repeat 4 47 0 3 675 25 0 0 0 chr3L 11803855 11803880 -12739677 + AT_rich Low_complexity Low_complexity 1 25 0 3 675 248 211 0 37 chr3L 11806876 11806930 -12736627 + DNAREP1_DM LINE Penelope 394 445 -149 3 675 472 149 11 11 chr3L 11808306 11808401 -12735156 + DNAREP1_DM LINE Penelope 55 149 -445 3 675 23 33 0 0 chr3L 11809569 11809599 -12733958 + AT_rich Low_complexity Low_complexity 1 30 0 3 675 23 54 0 0 chr3L 11815463 11815500 -12728057 + AT_rich Low_complexity Low_complexity 1 37 0 3 675 275 82 0 223 chr3L 11818928 11819022 -12724535 - DNAREP1_DM LINE Penelope -447 147 75 3 675 231 114 0 0 chr3L 11819030 11819065 -12724492 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 675 257 244 63 56 chr3L 11819332 11819475 -12724082 + P_DG DNA P 2742 2885 -3 3 675 901 110 175 28 chr3L 11819347 11819524 -12724033 - DNAREP1_DM LINE Penelope -2 592 390 3 675 29 0 0 0 chr3L 11823928 11823957 -12719600 + AT_rich Low_complexity Low_complexity 1 29 0 3 675 274 229 24 39 chr3L 11824103 11824230 -12719327 + T-rich Low_complexity Low_complexity 4 128 0 3 675 195 184 0 0 chr3L 11826268 11826306 -12717251 + (TTG)n Simple_repeat Simple_repeat 2 39 0 3 675 30 0 0 0 chr3L 11829979 11830009 -12713548 + AT_rich Low_complexity Low_complexity 1 30 0 3 675 29 0 0 0 chr3L 11830249 11830278 -12713279 + AT_rich Low_complexity Low_complexity 1 29 0 3 675 1388 69 5 31 chr3L 11830864 11831059 -12712498 - G5A_DM LINE Jockey -96 2745 2556 3 675 207 204 0 0 chr3L 11831114 11831158 -12712399 + A-rich Low_complexity Low_complexity 1 44 0 3 675 324 0 0 0 chr3L 11834195 11834231 -12709326 + (A)n Simple_repeat Simple_repeat 1 36 0 3 675 23 68 0 0 chr3L 11834888 11834932 -12708625 + AT_rich Low_complexity Low_complexity 1 44 0 3 675 180 0 0 0 chr3L 11837477 11837497 -12706060 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 675 211 119 47 23 chr3L 11840952 11840995 -12702562 + (TATG)n Simple_repeat Simple_repeat 3 46 0 3 675 375 197 126 17 chr3L 11841273 11841392 -12702165 + DNAREP1_DM LINE Penelope 33 164 -430 3 675 410 89 0 0 chr3L 11841382 11841438 -12702119 + DNAREP1_DM LINE Penelope 321 376 -218 3 675 257 51 26 0 chr3L 11841438 11841477 -12702080 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 675 22 35 0 0 chr3L 11842542 11842571 -12700986 + AT_rich Low_complexity Low_complexity 1 29 0 3 675 28 0 0 0 chr3L 11842846 11842874 -12700683 + AT_rich Low_complexity Low_complexity 1 28 0 3 675 29 78 0 0 chr3L 11845877 11845941 -12697616 + AT_rich Low_complexity Low_complexity 1 64 0 3 675 36 23 0 0 chr3L 11847184 11847227 -12696330 + AT_rich Low_complexity Low_complexity 1 43 0 3 675 28 0 0 0 chr3L 11848948 11848976 -12694581 + AT_rich Low_complexity Low_complexity 1 28 0 3 675 24 0 0 0 chr3L 11849264 11849288 -12694269 + AT_rich Low_complexity Low_complexity 1 24 0 3 675 22 35 0 0 chr3L 11852714 11852743 -12690814 + AT_rich Low_complexity Low_complexity 1 29 0 3 675 21 57 0 0 chr3L 11855223 11855258 -12688299 + AT_rich Low_complexity Low_complexity 1 35 0 3 675 23 54 0 0 chr3L 11856885 11856922 -12686635 + AT_rich Low_complexity Low_complexity 1 37 0 3 675 22 0 0 0 chr3L 11856982 11857004 -12686553 + AT_rich Low_complexity Low_complexity 1 22 0 3 675 4440 6 0 2 chr3L 11857706 11858207 -12685350 - POGO DNA Pogo 0 2121 1622 3 675 6931 1 0 1 chr3L 11858198 11858946 -12684611 - POGO DNA Pogo -1374 747 1 3 675 189 121 0 0 chr3L 11859291 11859324 -12684233 + (T)n Simple_repeat Simple_repeat 1 33 0 3 675 192 40 0 0 chr3L 11859819 11859844 -12683713 + (TGG)n Simple_repeat Simple_repeat 3 27 0 3 675 260 217 0 0 chr3L 11866223 11866283 -12677274 + A-rich Low_complexity Low_complexity 1 60 0 3 675 240 35 0 0 chr3L 11866398 11866427 -12677130 + (T)n Simple_repeat Simple_repeat 1 29 0 3 675 22 35 0 0 chr3L 11868901 11868930 -12674627 + AT_rich Low_complexity Low_complexity 1 29 0 3 675 21 36 0 0 chr3L 11870643 11870671 -12672886 + AT_rich Low_complexity Low_complexity 1 28 0 3 675 21 0 0 0 chr3L 11871449 11871470 -12672087 + AT_rich Low_complexity Low_complexity 1 21 0 3 675 21 36 0 0 chr3L 11872266 11872294 -12671263 + AT_rich Low_complexity Low_complexity 1 28 0 3 675 26 0 0 0 chr3L 11874313 11874339 -12669218 + AT_rich Low_complexity Low_complexity 1 26 0 3 675 24 0 0 0 chr3L 11879489 11879513 -12664044 + AT_rich Low_complexity Low_complexity 1 24 0 3 675 359 89 578 0 chr3L 11880852 11880935 -12662622 + DNAREP1_DM LINE Penelope 445 575 -19 3 675 25 0 0 0 chr3L 11880963 11880988 -12662569 + AT_rich Low_complexity Low_complexity 1 25 0 3 675 29 28 0 0 chr3L 11883969 11884005 -12659552 + AT_rich Low_complexity Low_complexity 1 36 0 3 675 663 141 193 0 chr3L 11886232 11886367 -12657190 - DNAREP1_DM LINE Penelope -6 588 428 3 675 392 154 26 0 chr3L 11886373 11886451 -12657106 - DNAREP1_DM LINE Penelope -404 190 111 3 675 308 216 0 63 chr3L 11886971 11887050 -12656507 - ROO_I LTR Pao -7513 743 670 3 675 32 0 0 0 chr3L 11891503 11891535 -12652022 + AT_rich Low_complexity Low_complexity 1 32 0 3 675 21 57 0 0 chr3L 11892067 11892102 -12651455 + AT_rich Low_complexity Low_complexity 1 35 0 3 675 24 0 0 0 chr3L 11892762 11892786 -12650771 + AT_rich Low_complexity Low_complexity 1 24 0 3 675 42 104 0 0 chr3L 11893496 11893650 -12649907 + AT_rich Low_complexity Low_complexity 1 154 0 3 675 282 29 0 0 chr3L 11893880 11893915 -12649642 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 675 21 0 0 0 chr3L 11895124 11895145 -12648412 + AT_rich Low_complexity Low_complexity 1 21 0 3 675 29 70 0 0 chr3L 11896330 11896387 -12647170 + AT_rich Low_complexity Low_complexity 1 57 0 3 675 195 167 0 0 chr3L 11897654 11897696 -12645861 + (CAGAGA)n Simple_repeat Simple_repeat 1 42 0 3 675 22 56 0 0 chr3L 11902742 11902778 -12640779 + AT_rich Low_complexity Low_complexity 1 36 0 3 675 192 143 0 0 chr3L 11903222 11903264 -12640293 + (ATG)n Simple_repeat Simple_repeat 3 44 0 3 675 24 77 0 0 chr3L 11903964 11904016 -12639541 + AT_rich Low_complexity Low_complexity 1 52 0 3 675 23 0 0 0 chr3L 11905135 11905158 -12638399 + AT_rich Low_complexity Low_complexity 1 23 0 3 675 34 42 0 0 chr3L 11907392 11907440 -12636117 + AT_rich Low_complexity Low_complexity 1 48 0 3 675 22 35 0 0 chr3L 11911819 11911848 -12631709 + AT_rich Low_complexity Low_complexity 1 29 0 3 675 213 261 14 14 chr3L 11911936 11912006 -12631551 + A-rich Low_complexity Low_complexity 1 70 0 3 675 23 0 0 0 chr3L 11912374 11912397 -12631160 + AT_rich Low_complexity Low_complexity 1 23 0 3 675 31 0 0 0 chr3L 11912409 11912440 -12631117 + AT_rich Low_complexity Low_complexity 1 31 0 3 675 27 29 0 0 chr3L 11912877 11912911 -12630646 + AT_rich Low_complexity Low_complexity 1 34 0 3 675 25 0 0 0 chr3L 11913068 11913093 -12630464 + AT_rich Low_complexity Low_complexity 1 25 0 3 675 252 345 0 0 chr3L 11918320 11918407 -12625150 + (TTCGGG)n Simple_repeat Simple_repeat 1 87 0 3 675 38 39 0 0 chr3L 11922773 11922825 -12620732 + AT_rich Low_complexity Low_complexity 1 52 0 3 675 320 271 0 0 chr3L 11924504 11924574 -12618983 + (CCCCAG)n Simple_repeat Simple_repeat 2 71 0 3 675 202 222 0 0 chr3L 11925168 11925213 -12618344 + (TGG)n Simple_repeat Simple_repeat 2 46 0 3 675 21 0 0 0 chr3L 11925476 11925497 -12618060 + AT_rich Low_complexity Low_complexity 1 21 0 3 675 21 36 0 0 chr3L 11926590 11926618 -12616939 + AT_rich Low_complexity Low_complexity 1 28 0 3 676 28 48 0 0 chr3L 11932637 11932679 -12610878 + AT_rich Low_complexity Low_complexity 1 42 0 3 676 31 0 0 0 chr3L 11933179 11933210 -12610347 + AT_rich Low_complexity Low_complexity 1 31 0 3 676 21 0 0 0 chr3L 11933219 11933240 -12610317 + AT_rich Low_complexity Low_complexity 1 21 0 3 676 25 31 0 0 chr3L 11933345 11933377 -12610180 + AT_rich Low_complexity Low_complexity 1 32 0 3 676 29 84 0 0 chr3L 11934957 11935028 -12608529 + AT_rich Low_complexity Low_complexity 1 71 0 3 676 25 0 0 0 chr3L 11935845 11935870 -12607687 + AT_rich Low_complexity Low_complexity 1 25 0 3 676 22 35 0 0 chr3L 11940212 11940241 -12603316 + AT_rich Low_complexity Low_complexity 1 29 0 3 676 23 54 0 0 chr3L 11958775 11958812 -12584745 + AT_rich Low_complexity Low_complexity 1 37 0 3 676 22 0 0 0 chr3L 11960533 11960555 -12583002 + AT_rich Low_complexity Low_complexity 1 22 0 3 676 25 51 0 0 chr3L 11967409 11967448 -12576109 + AT_rich Low_complexity Low_complexity 1 39 0 3 676 23 0 0 0 chr3L 11968050 11968073 -12575484 + AT_rich Low_complexity Low_complexity 1 23 0 3 676 31 0 0 0 chr3L 11986344 11986375 -12557182 + AT_rich Low_complexity Low_complexity 1 31 0 3 676 259 96 19 19 chr3L 11995523 11995576 -12547981 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 676 23 54 0 0 chr3L 11996944 11996981 -12546576 + AT_rich Low_complexity Low_complexity 1 37 0 3 676 21 0 0 0 chr3L 11997768 11997789 -12545768 + AT_rich Low_complexity Low_complexity 1 21 0 3 676 35 24 0 0 chr3L 12008023 12008065 -12535492 + AT_rich Low_complexity Low_complexity 1 42 0 3 676 198 150 0 0 chr3L 12008349 12008389 -12535168 + (CAATC)n Simple_repeat Simple_repeat 2 41 0 3 676 28 29 0 0 chr3L 12009514 12009549 -12534008 + AT_rich Low_complexity Low_complexity 1 35 0 3 676 201 39 0 0 chr3L 12009710 12009736 -12533821 + (T)n Simple_repeat Simple_repeat 1 26 0 3 676 23 0 0 0 chr3L 12012451 12012474 -12531083 + AT_rich Low_complexity Low_complexity 1 23 0 3 676 25 0 0 0 chr3L 12015628 12015653 -12527904 + AT_rich Low_complexity Low_complexity 1 25 0 3 676 31 0 0 0 chr3L 12016619 12016650 -12526907 + AT_rich Low_complexity Low_complexity 1 31 0 3 676 255 31 0 0 chr3L 12017289 12017321 -12526236 + (CAAAT)n Simple_repeat Simple_repeat 2 33 0 3 676 25 65 0 0 chr3L 12020608 12020654 -12522903 + AT_rich Low_complexity Low_complexity 1 46 0 3 676 26 0 0 0 chr3L 12023003 12023029 -12520528 + AT_rich Low_complexity Low_complexity 1 26 0 3 676 21 0 0 0 chr3L 12024365 12024386 -12519171 + AT_rich Low_complexity Low_complexity 1 21 0 3 676 183 42 0 0 chr3L 12026840 12026864 -12516693 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 676 21 0 0 0 chr3L 12026893 12026914 -12516643 + AT_rich Low_complexity Low_complexity 1 21 0 3 676 27 81 0 0 chr3L 12030397 12030459 -12513098 + AT_rich Low_complexity Low_complexity 1 62 0 3 676 24 0 0 0 chr3L 12030739 12030763 -12512794 + AT_rich Low_complexity Low_complexity 1 24 0 3 676 23 0 0 0 chr3L 12032216 12032239 -12511318 + AT_rich Low_complexity Low_complexity 1 23 0 3 676 243 0 0 0 chr3L 12033300 12033327 -12510230 + (CAGTT)n Simple_repeat Simple_repeat 4 30 0 3 676 21 36 0 0 chr3L 12036164 12036192 -12507365 + AT_rich Low_complexity Low_complexity 1 28 0 3 676 213 39 0 0 chr3L 12040560 12040586 -12502971 + (TTG)n Simple_repeat Simple_repeat 1 26 0 3 676 21 0 0 0 chr3L 12043969 12043990 -12499567 + AT_rich Low_complexity Low_complexity 1 21 0 3 676 216 270 0 13 chr3L 12048564 12048639 -12494918 + (TATATG)n Simple_repeat Simple_repeat 4 77 0 3 676 26 0 0 0 chr3L 12048833 12048859 -12494698 + AT_rich Low_complexity Low_complexity 1 26 0 3 676 27 29 0 0 chr3L 12051173 12051207 -12492350 + AT_rich Low_complexity Low_complexity 1 34 0 3 676 207 0 0 0 chr3L 12052215 12052238 -12491319 + (CAT)n Simple_repeat Simple_repeat 1 23 0 3 676 28 29 0 0 chr3L 12055012 12055047 -12488510 + AT_rich Low_complexity Low_complexity 1 35 0 3 676 21 36 0 0 chr3L 12057169 12057197 -12486360 + AT_rich Low_complexity Low_complexity 1 28 0 3 676 27 108 0 0 chr3L 12058319 12058430 -12485127 + AT_rich Low_complexity Low_complexity 1 111 0 3 677 289 138 16 78 chr3L 12060503 12060597 -12482960 - DNAREP1_DM LINE Penelope -118 476 428 3 677 36 23 0 0 chr3L 12061461 12061504 -12482053 + AT_rich Low_complexity Low_complexity 1 43 0 3 677 24 32 0 0 chr3L 12064620 12064651 -12478906 + AT_rich Low_complexity Low_complexity 1 31 0 3 677 21 0 0 0 chr3L 12067439 12067460 -12476097 + AT_rich Low_complexity Low_complexity 1 21 0 3 677 202 233 0 52 chr3L 12068328 12068405 -12475152 + T-rich Low_complexity Low_complexity 3 75 0 3 677 29 0 0 0 chr3L 12068794 12068823 -12474734 + AT_rich Low_complexity Low_complexity 1 29 0 3 677 22 0 0 0 chr3L 12074211 12074233 -12469324 + AT_rich Low_complexity Low_complexity 1 22 0 3 677 188 34 0 33 chr3L 12075418 12075448 -12468109 + (TAAAAA)n Simple_repeat Simple_repeat 1 29 0 3 677 21 0 0 0 chr3L 12077286 12077307 -12466250 + AT_rich Low_complexity Low_complexity 1 21 0 3 677 36 87 0 0 chr3L 12078602 12078694 -12464863 + AT_rich Low_complexity Low_complexity 1 92 0 3 677 22 0 0 0 chr3L 12080146 12080168 -12463389 + AT_rich Low_complexity Low_complexity 1 22 0 3 677 22 56 0 0 chr3L 12081700 12081736 -12461821 + AT_rich Low_complexity Low_complexity 1 36 0 3 677 21 0 0 0 chr3L 12083022 12083043 -12460514 + AT_rich Low_complexity Low_complexity 1 21 0 3 677 233 172 0 15 chr3L 12083435 12083500 -12460057 + (TTG)n Simple_repeat Simple_repeat 1 64 0 3 677 183 129 0 0 chr3L 12084234 12084265 -12459292 + (CATA)n Simple_repeat Simple_repeat 1 31 0 3 677 34 24 0 0 chr3L 12085417 12085458 -12458099 + AT_rich Low_complexity Low_complexity 1 41 0 3 677 28 48 0 0 chr3L 12087692 12087734 -12455823 + AT_rich Low_complexity Low_complexity 1 42 0 3 677 24 53 0 0 chr3L 12088193 12088231 -12455326 + AT_rich Low_complexity Low_complexity 1 38 0 3 677 21 0 0 0 chr3L 12089389 12089410 -12454147 + AT_rich Low_complexity Low_complexity 1 21 0 3 677 195 184 0 0 chr3L 12089792 12089830 -12453727 + (TATG)n Simple_repeat Simple_repeat 3 40 0 3 677 35 54 0 0 chr3L 12089981 12090037 -12453520 + AT_rich Low_complexity Low_complexity 1 56 0 3 677 24 91 0 0 chr3L 12090064 12090130 -12453427 + AT_rich Low_complexity Low_complexity 1 66 0 3 677 27 0 0 0 chr3L 12094538 12094565 -12448992 + AT_rich Low_complexity Low_complexity 1 27 0 3 677 242 214 11 0 chr3L 12095026 12095115 -12448442 + (CAATC)n Simple_repeat Simple_repeat 4 93 0 3 677 35 54 0 0 chr3L 12095248 12095304 -12448253 + AT_rich Low_complexity Low_complexity 1 56 0 3 677 21 0 0 0 chr3L 12095983 12096004 -12447553 + AT_rich Low_complexity Low_complexity 1 21 0 3 677 216 45 65 22 chr3L 12096153 12096199 -12447358 + (TAAAA)n Simple_repeat Simple_repeat 5 52 0 3 677 195 100 0 0 chr3L 12096359 12096389 -12447168 + (CAA)n Simple_repeat Simple_repeat 2 31 0 3 677 26 0 0 0 chr3L 12097353 12097379 -12446178 + AT_rich Low_complexity Low_complexity 1 26 0 3 677 22 80 0 0 chr3L 12098576 12098626 -12444931 + AT_rich Low_complexity Low_complexity 1 50 0 3 677 21 0 0 0 chr3L 12099401 12099422 -12444135 + AT_rich Low_complexity Low_complexity 1 21 0 3 677 201 158 0 0 chr3L 12100155 12100193 -12443364 + A-rich Low_complexity Low_complexity 1 38 0 3 677 22 80 0 0 chr3L 12101606 12101656 -12441901 + AT_rich Low_complexity Low_complexity 1 50 0 3 677 26 0 0 0 chr3L 12102596 12102622 -12440935 + AT_rich Low_complexity Low_complexity 1 26 0 3 677 37 0 0 0 chr3L 12102803 12102840 -12440717 + AT_rich Low_complexity Low_complexity 1 37 0 3 677 24 0 0 0 chr3L 12102933 12102957 -12440600 + AT_rich Low_complexity Low_complexity 1 24 0 3 677 261 151 0 0 chr3L 12104538 12104591 -12438966 + (TTG)n Simple_repeat Simple_repeat 1 53 0 3 677 261 194 15 0 chr3L 12104859 12104926 -12438631 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 3 677 225 210 0 0 chr3L 12107796 12107858 -12435699 + (GAATG)n Simple_repeat Simple_repeat 4 65 0 3 677 249 83 0 0 chr3L 12110699 12110735 -12432822 + (GGA)n Simple_repeat Simple_repeat 1 36 0 3 677 22 35 0 0 chr3L 12111051 12111080 -12432477 + AT_rich Low_complexity Low_complexity 1 29 0 3 677 25 0 0 0 chr3L 12112899 12112924 -12430633 + AT_rich Low_complexity Low_complexity 1 25 0 3 677 40 21 0 0 chr3L 12114251 12114298 -12429259 + AT_rich Low_complexity Low_complexity 1 47 0 3 677 23 0 0 0 chr3L 12115882 12115905 -12427652 + AT_rich Low_complexity Low_complexity 1 23 0 3 677 186 43 0 0 chr3L 12117432 12117455 -12426102 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 677 192 111 0 0 chr3L 12117911 12117947 -12425610 + (CTG)n Simple_repeat Simple_repeat 1 36 0 3 677 216 122 0 0 chr3L 12118044 12118085 -12425472 + (CTG)n Simple_repeat Simple_repeat 1 41 0 3 677 21 36 0 0 chr3L 12118557 12118585 -12424972 + AT_rich Low_complexity Low_complexity 1 28 0 3 677 22 0 0 0 chr3L 12120972 12120994 -12422563 + AT_rich Low_complexity Low_complexity 1 22 0 3 677 36 40 0 0 chr3L 12125105 12125155 -12418402 + AT_rich Low_complexity Low_complexity 1 50 0 3 677 24 32 0 0 chr3L 12129873 12129904 -12413653 + AT_rich Low_complexity Low_complexity 1 31 0 3 677 22 35 0 0 chr3L 12131664 12131693 -12411864 + AT_rich Low_complexity Low_complexity 1 29 0 3 677 32 26 0 0 chr3L 12136491 12136530 -12407027 + AT_rich Low_complexity Low_complexity 1 39 0 3 677 22 80 0 0 chr3L 12142218 12142268 -12401289 + AT_rich Low_complexity Low_complexity 1 50 0 3 677 22 0 0 0 chr3L 12150008 12150030 -12393527 + AT_rich Low_complexity Low_complexity 1 22 0 3 677 21 57 0 0 chr3L 12150171 12150206 -12393351 + AT_rich Low_complexity Low_complexity 1 35 0 3 677 26 0 0 0 chr3L 12151580 12151606 -12391951 + AT_rich Low_complexity Low_complexity 1 26 0 3 677 35 24 0 0 chr3L 12152815 12152857 -12390700 + AT_rich Low_complexity Low_complexity 1 42 0 3 677 225 214 0 0 chr3L 12158340 12158382 -12385175 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 677 22 0 0 0 chr3L 12158530 12158552 -12385005 + AT_rich Low_complexity Low_complexity 1 22 0 3 677 33 43 0 0 chr3L 12160827 12160874 -12382683 + AT_rich Low_complexity Low_complexity 1 47 0 3 677 219 226 0 0 chr3L 12161657 12161710 -12381847 + (TGG)n Simple_repeat Simple_repeat 1 53 0 3 677 21 71 0 0 chr3L 12164098 12164140 -12379417 + AT_rich Low_complexity Low_complexity 1 42 0 3 677 26 0 0 0 chr3L 12167630 12167656 -12375901 + AT_rich Low_complexity Low_complexity 1 26 0 3 677 29 0 0 0 chr3L 12169247 12169276 -12374281 + AT_rich Low_complexity Low_complexity 1 29 0 3 677 198 103 0 0 chr3L 12171842 12171871 -12371686 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 677 180 77 0 0 chr3L 12172749 12172775 -12370782 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 3 677 24 0 0 0 chr3L 12172872 12172896 -12370661 + AT_rich Low_complexity Low_complexity 1 24 0 3 677 21 0 0 0 chr3L 12173823 12173844 -12369713 + AT_rich Low_complexity Low_complexity 1 21 0 3 677 237 33 0 0 chr3L 12176047 12176077 -12367480 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 677 225 275 0 0 chr3L 12176193 12176273 -12367284 + (CCCGAA)n Simple_repeat Simple_repeat 2 81 0 3 677 264 232 14 14 chr3L 12177161 12177231 -12366326 + DNAREP1_DM LINE Penelope 1 70 -524 3 677 538 182 19 144 chr3L 12177273 12177433 -12366124 + DNAREP1_DM LINE Penelope 455 594 0 3 677 34 0 0 0 chr3L 12178499 12178533 -12365024 + AT_rich Low_complexity Low_complexity 1 34 0 3 677 23 33 0 0 chr3L 12179592 12179622 -12363935 + AT_rich Low_complexity Low_complexity 1 30 0 3 677 420 220 0 0 chr3L 12180629 12180754 -12362803 + DMRT1A LINE R1 1990 2223 -2960 3 677 1110 196 137 110 chr3L 12180889 12181343 -12362214 + Gypsy12A_LTR LTR Gypsy 1812 2277 -3 3 677 23 0 0 0 chr3L 12183680 12183703 -12359854 + AT_rich Low_complexity Low_complexity 1 23 0 3 677 180 0 0 0 chr3L 12188004 12188024 -12355533 + (A)n Simple_repeat Simple_repeat 1 20 0 3 678 214 29 57 0 chr3L 12202592 12202627 -12340930 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 678 312 148 0 0 chr3L 12203499 12203560 -12339997 + (TTGG)n Simple_repeat Simple_repeat 3 63 0 3 678 23 0 0 0 chr3L 12206063 12206086 -12337471 + AT_rich Low_complexity Low_complexity 1 23 0 3 678 225 0 0 0 chr3L 12208216 12208241 -12335316 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 678 209 196 0 0 chr3L 12209295 12209341 -12334216 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 678 25 0 0 0 chr3L 12210933 12210958 -12332599 + AT_rich Low_complexity Low_complexity 1 25 0 3 678 189 0 0 0 chr3L 12212451 12212472 -12331085 + (CAG)n Simple_repeat Simple_repeat 2 22 0 3 678 276 130 0 0 chr3L 12217131 12217177 -12326380 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 3 678 237 83 0 0 chr3L 12217961 12217997 -12325560 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 678 38 22 0 0 chr3L 12218280 12218325 -12325232 + AT_rich Low_complexity Low_complexity 1 45 0 3 678 21 0 0 0 chr3L 12218456 12218477 -12325080 + AT_rich Low_complexity Low_complexity 1 21 0 3 678 186 143 0 0 chr3L 12218759 12218794 -12324763 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 3 678 198 0 0 0 chr3L 12220147 12220169 -12323388 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 678 206 116 23 0 chr3L 12221696 12221739 -12321818 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 678 28 0 0 0 chr3L 12221971 12221999 -12321558 + AT_rich Low_complexity Low_complexity 1 28 0 3 678 246 136 0 0 chr3L 12223650 12223694 -12319863 + (CAGA)n Simple_repeat Simple_repeat 3 46 0 3 678 210 128 0 0 chr3L 12225235 12225274 -12318283 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 678 189 0 0 0 chr3L 12225869 12225890 -12317667 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 678 195 100 0 0 chr3L 12226503 12226533 -12317024 + (AACTG)n Simple_repeat Simple_repeat 4 33 0 3 678 182 118 0 29 chr3L 12227835 12227870 -12315687 + (CAGC)n Simple_repeat Simple_repeat 4 37 0 3 678 24 0 0 0 chr3L 12228587 12228611 -12314946 + AT_rich Low_complexity Low_complexity 1 24 0 3 678 21 0 0 0 chr3L 12229336 12229357 -12314200 + AT_rich Low_complexity Low_complexity 1 21 0 3 678 611 182 155 7 chr3L 12229771 12229926 -12313631 - DNAREP1_DM LINE Penelope -15 579 402 3 678 212 238 0 0 chr3L 12232167 12232230 -12311327 + GA-rich Low_complexity Low_complexity 2 64 0 3 678 25 31 0 0 chr3L 12232293 12232325 -12311232 + AT_rich Low_complexity Low_complexity 1 32 0 3 678 180 125 0 0 chr3L 12232503 12232535 -12311022 + (TTG)n Simple_repeat Simple_repeat 3 34 0 3 678 207 108 0 26 chr3L 12235271 12235309 -12308248 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 678 249 83 0 0 chr3L 12236044 12236080 -12307477 + (CTG)n Simple_repeat Simple_repeat 3 38 0 3 678 219 220 0 0 chr3L 12239382 12239432 -12304125 + (CAG)n Simple_repeat Simple_repeat 2 51 0 3 678 282 29 0 0 chr3L 12239620 12239655 -12303902 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 678 25 31 0 0 chr3L 12240559 12240591 -12302966 + AT_rich Low_complexity Low_complexity 1 32 0 3 678 242 220 0 0 chr3L 12240967 12241026 -12302531 + A-rich Low_complexity Low_complexity 4 62 0 3 678 24 0 0 0 chr3L 12241379 12241403 -12302154 + AT_rich Low_complexity Low_complexity 1 24 0 3 678 24 0 0 0 chr3L 12241664 12241688 -12301869 + AT_rich Low_complexity Low_complexity 1 24 0 3 678 25 0 0 0 chr3L 12241977 12242002 -12301555 + AT_rich Low_complexity Low_complexity 1 25 0 3 678 33 43 0 0 chr3L 12243765 12243812 -12299745 + AT_rich Low_complexity Low_complexity 1 47 0 3 678 198 118 0 0 chr3L 12244123 12244157 -12299400 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 678 22 0 0 0 chr3L 12244764 12244786 -12298771 + AT_rich Low_complexity Low_complexity 1 22 0 3 678 215 79 26 0 chr3L 12245528 12245566 -12297991 + (CATTC)n Simple_repeat Simple_repeat 3 41 0 3 678 26 0 0 0 chr3L 12245850 12245876 -12297681 + AT_rich Low_complexity Low_complexity 1 26 0 3 678 296 182 45 11 chr3L 12245895 12245984 -12297573 + (TTTA)n Simple_repeat Simple_repeat 4 95 0 3 678 186 118 0 0 chr3L 12246325 12246359 -12297198 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 678 189 0 0 0 chr3L 12246591 12246612 -12296945 + (TAA)n Simple_repeat Simple_repeat 3 23 0 3 678 232 204 0 36 chr3L 12249469 12249525 -12294032 + (CGAAG)n Simple_repeat Simple_repeat 3 56 0 3 678 32 0 0 0 chr3L 12250182 12250214 -12293343 + AT_rich Low_complexity Low_complexity 1 32 0 3 678 27 0 0 0 chr3L 12251054 12251081 -12292476 + AT_rich Low_complexity Low_complexity 1 27 0 3 678 201 132 0 0 chr3L 12253954 12253992 -12289565 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 3 678 204 125 0 0 chr3L 12254258 12254290 -12289267 + (CAT)n Simple_repeat Simple_repeat 2 33 0 3 678 22 56 0 0 chr3L 12255444 12255480 -12288077 + AT_rich Low_complexity Low_complexity 1 36 0 3 678 195 114 0 0 chr3L 12256567 12256602 -12286955 + (GATTG)n Simple_repeat Simple_repeat 3 37 0 3 678 204 111 0 0 chr3L 12258452 12258488 -12285069 + (A)n Simple_repeat Simple_repeat 1 36 0 3 678 212 77 26 0 chr3L 12260296 12260335 -12283222 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 3 678 52 30 0 0 chr3L 12264517 12264583 -12278974 + AT_rich Low_complexity Low_complexity 1 66 0 3 678 21 0 0 0 chr3L 12267556 12267577 -12275980 + AT_rich Low_complexity Low_complexity 1 21 0 3 678 29 0 0 0 chr3L 12268980 12269009 -12274548 + AT_rich Low_complexity Low_complexity 1 29 0 3 678 30 62 0 36 chr3L 12270423 12270507 -12273050 + AT_rich Low_complexity Low_complexity 1 81 0 3 678 399 70 0 40 chr3L 12274609 12274684 -12268873 + (TTA)n Simple_repeat Simple_repeat 2 73 0 3 678 22 0 0 0 chr3L 12281712 12281734 -12261823 + AT_rich Low_complexity Low_complexity 1 22 0 3 678 246 128 0 0 chr3L 12282824 12282863 -12260694 + (TGG)n Simple_repeat Simple_repeat 1 39 0 3 678 27 0 0 0 chr3L 12283490 12283517 -12260040 + AT_rich Low_complexity Low_complexity 1 27 0 3 678 312 120 0 0 chr3L 12285779 12285829 -12257728 + (CTG)n Simple_repeat Simple_repeat 1 50 0 3 678 180 0 0 0 chr3L 12289595 12289615 -12253942 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 678 21 36 0 0 chr3L 12290605 12290633 -12252924 + AT_rich Low_complexity Low_complexity 1 28 0 3 678 27 62 0 0 chr3L 12290664 12290712 -12252845 + AT_rich Low_complexity Low_complexity 1 48 0 3 678 210 128 0 0 chr3L 12291018 12291057 -12252500 + (TCCA)n Simple_repeat Simple_repeat 2 40 0 3 678 40 37 0 0 chr3L 12292670 12292724 -12250833 + AT_rich Low_complexity Low_complexity 1 54 0 3 678 180 0 0 0 chr3L 12293858 12293878 -12249679 + (CTTAA)n Simple_repeat Simple_repeat 1 20 0 3 678 243 0 0 0 chr3L 12294667 12294694 -12248863 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 678 31 26 0 0 chr3L 12295170 12295208 -12248349 + AT_rich Low_complexity Low_complexity 1 38 0 3 678 207 182 0 0 chr3L 12295763 12295807 -12247750 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 3 678 25 31 0 0 chr3L 12297945 12297977 -12245580 + AT_rich Low_complexity Low_complexity 1 32 0 3 678 21 0 0 0 chr3L 12300455 12300476 -12243081 + AT_rich Low_complexity Low_complexity 1 21 0 3 678 238 196 20 0 chr3L 12301649 12301700 -12241857 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 678 212 175 0 0 chr3L 12302937 12302977 -12240580 + T-rich Low_complexity Low_complexity 1 40 0 3 678 233 157 39 0 chr3L 12303733 12303784 -12239773 + (TGGG)n Simple_repeat Simple_repeat 1 53 0 3 678 206 288 17 0 chr3L 12305135 12305194 -12238363 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 678 232 258 0 15 chr3L 12305292 12305359 -12238198 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 678 198 91 0 0 chr3L 12305546 12305579 -12237978 + (TGAG)n Simple_repeat Simple_repeat 4 36 0 3 678 26 30 0 0 chr3L 12305913 12305946 -12237611 + AT_rich Low_complexity Low_complexity 1 33 0 3 678 23 0 0 0 chr3L 12311235 12311258 -12232299 + AT_rich Low_complexity Low_complexity 1 23 0 3 678 201 295 0 0 chr3L 12311692 12311753 -12231804 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 678 195 42 0 0 chr3L 12311910 12311934 -12231623 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 678 25 0 0 0 chr3L 12313553 12313578 -12229979 + AT_rich Low_complexity Low_complexity 1 25 0 3 678 22 0 0 0 chr3L 12316312 12316334 -12227223 + AT_rich Low_complexity Low_complexity 1 22 0 3 678 25 90 0 0 chr3L 12316604 12316671 -12226886 + AT_rich Low_complexity Low_complexity 1 67 0 3 678 204 267 0 0 chr3L 12319178 12319223 -12224334 + (CCCGAA)n Simple_repeat Simple_repeat 4 48 0 3 678 225 0 0 0 chr3L 12320281 12320306 -12223251 + (CTG)n Simple_repeat Simple_repeat 2 26 0 3 679 223 122 0 39 chr3L 12321763 12321814 -12221743 + (CAG)n Simple_repeat Simple_repeat 1 49 0 3 679 278 177 0 0 chr3L 12322795 12322874 -12220683 + ROO_I LTR Pao 639 717 -7539 3 679 262 247 0 0 chr3L 12322937 12323022 -12220535 + ROO_I LTR Pao 665 749 -7507 3 679 189 147 0 0 chr3L 12323037 12323071 -12220486 + (CTG)n Simple_repeat Simple_repeat 1 34 0 3 679 183 100 0 0 chr3L 12323141 12323171 -12220386 + (CTG)n Simple_repeat Simple_repeat 3 32 0 3 679 22 35 0 0 chr3L 12323846 12323875 -12219682 + AT_rich Low_complexity Low_complexity 1 29 0 3 679 207 0 0 0 chr3L 12324376 12324399 -12219158 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 679 21 0 0 0 chr3L 12327201 12327222 -12216335 + AT_rich Low_complexity Low_complexity 1 21 0 3 679 45 34 0 0 chr3L 12329163 12329222 -12214335 + AT_rich Low_complexity Low_complexity 1 59 0 3 679 24 0 0 0 chr3L 12329241 12329265 -12214292 + AT_rich Low_complexity Low_complexity 1 24 0 3 679 201 129 0 0 chr3L 12333092 12333123 -12210434 + (CTG)n Simple_repeat Simple_repeat 1 31 0 3 679 189 171 0 0 chr3L 12333135 12333170 -12210387 + (CCG)n Simple_repeat Simple_repeat 2 36 0 3 679 26 0 0 0 chr3L 12337119 12337145 -12206412 + AT_rich Low_complexity Low_complexity 1 26 0 3 679 189 74 0 0 chr3L 12337947 12337974 -12205583 + (TTGG)n Simple_repeat Simple_repeat 1 27 0 3 679 180 77 0 0 chr3L 12343785 12343811 -12199746 + (TATG)n Simple_repeat Simple_repeat 2 27 0 3 679 219 69 0 0 chr3L 12355071 12355100 -12188457 + (CAT)n Simple_repeat Simple_repeat 1 29 0 3 679 192 77 0 0 chr3L 12358791 12358817 -12184740 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 679 21 0 0 0 chr3L 12362813 12362834 -12180723 + AT_rich Low_complexity Low_complexity 1 21 0 3 679 29 90 0 0 chr3L 12364325 12364403 -12179154 + AT_rich Low_complexity Low_complexity 1 78 0 3 679 32 0 0 0 chr3L 12369440 12369472 -12174085 + AT_rich Low_complexity Low_complexity 1 32 0 3 679 21 57 0 0 chr3L 12372090 12372125 -12171432 + AT_rich Low_complexity Low_complexity 1 35 0 3 679 27 0 0 0 chr3L 12381578 12381605 -12161952 + AT_rich Low_complexity Low_complexity 1 27 0 3 679 28 91 0 0 chr3L 12382509 12382586 -12160971 + AT_rich Low_complexity Low_complexity 1 77 0 3 679 22 0 0 0 chr3L 12385075 12385097 -12158460 + AT_rich Low_complexity Low_complexity 1 22 0 3 679 27 0 0 0 chr3L 12390101 12390128 -12153429 + AT_rich Low_complexity Low_complexity 1 27 0 3 679 24 0 0 0 chr3L 12395310 12395334 -12148223 + AT_rich Low_complexity Low_complexity 1 24 0 3 679 23 0 0 0 chr3L 12402700 12402723 -12140834 + AT_rich Low_complexity Low_complexity 1 23 0 3 679 30 69 0 0 chr3L 12408042 12408100 -12135457 + AT_rich Low_complexity Low_complexity 1 58 0 3 679 22 35 0 0 chr3L 12410950 12410979 -12132578 + AT_rich Low_complexity Low_complexity 1 29 0 3 679 249 146 0 0 chr3L 12414956 12415004 -12128553 + (TGGA)n Simple_repeat Simple_repeat 4 51 0 3 679 214 171 0 0 chr3L 12415760 12415801 -12127756 + CT-rich Low_complexity Low_complexity 1 41 0 3 679 362 293 12 18 chr3L 12416029 12416196 -12127361 + (CTG)n Simple_repeat Simple_repeat 1 166 0 3 679 237 377 0 0 chr3L 12416913 12417019 -12126538 + (CTG)n Simple_repeat Simple_repeat 3 108 0 3 679 22 70 0 0 chr3L 12420091 12420134 -12123423 + AT_rich Low_complexity Low_complexity 1 43 0 3 679 23 54 0 0 chr3L 12422290 12422327 -12121230 + AT_rich Low_complexity Low_complexity 1 37 0 3 679 22 0 0 0 chr3L 12423921 12423943 -12119614 + AT_rich Low_complexity Low_complexity 1 22 0 3 679 190 81 26 26 chr3L 12424168 12424206 -12119351 + (CTG)n Simple_repeat Simple_repeat 1 38 0 3 679 29 28 0 0 chr3L 12424617 12424653 -12118904 + AT_rich Low_complexity Low_complexity 1 36 0 3 679 239 93 0 23 chr3L 12424768 12424812 -12118745 + (TATAA)n Simple_repeat Simple_repeat 4 46 0 3 679 25 31 0 0 chr3L 12424919 12424951 -12118606 + AT_rich Low_complexity Low_complexity 1 32 0 3 679 347 152 0 12 chr3L 12425634 12425714 -12117843 + (CTG)n Simple_repeat Simple_repeat 2 80 0 3 679 183 146 0 0 chr3L 12425937 12425978 -12117579 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 679 21 71 0 0 chr3L 12428075 12428117 -12115440 + AT_rich Low_complexity Low_complexity 1 42 0 3 679 26 30 0 0 chr3L 12428411 12428444 -12115113 + AT_rich Low_complexity Low_complexity 1 33 0 3 679 212 254 36 0 chr3L 12428706 12428761 -12114796 + (TCCG)n Simple_repeat Simple_repeat 1 57 0 3 679 232 246 0 0 chr3L 12430346 12430407 -12113150 + ROO_I LTR Pao 639 699 -7557 3 679 234 91 0 0 chr3L 12431934 12431967 -12111590 + (ATGGTG)n Simple_repeat Simple_repeat 4 36 0 3 679 195 167 0 0 chr3L 12431998 12432040 -12111517 + (CTA)n Simple_repeat Simple_repeat 2 43 0 3 679 213 39 0 0 chr3L 12438625 12438651 -12104906 + (CGG)n Simple_repeat Simple_repeat 3 28 0 3 679 186 118 0 0 chr3L 12439778 12439812 -12103745 + (TCTCC)n Simple_repeat Simple_repeat 3 36 0 3 679 216 97 0 0 chr3L 12440431 12440462 -12103095 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 3 679 21 0 0 0 chr3L 12441999 12442020 -12101537 + AT_rich Low_complexity Low_complexity 1 21 0 3 679 42 20 0 0 chr3L 12443192 12443241 -12100316 + AT_rich Low_complexity Low_complexity 1 49 0 3 679 25 31 0 0 chr3L 12443686 12443718 -12099839 + AT_rich Low_complexity Low_complexity 1 32 0 3 679 221 271 0 17 chr3L 12444065 12444125 -12099432 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 3 679 237 65 0 0 chr3L 12444307 12444338 -12099219 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 679 22 0 0 0 chr3L 12445719 12445741 -12097816 + AT_rich Low_complexity Low_complexity 1 22 0 3 679 183 42 0 0 chr3L 12445953 12445977 -12097580 + (ATTCG)n Simple_repeat Simple_repeat 2 25 0 3 679 192 77 0 0 chr3L 12449396 12449422 -12094135 + (TTAAG)n Simple_repeat Simple_repeat 3 28 0 3 679 180 0 0 0 chr3L 12449810 12449830 -12093727 + (ATG)n Simple_repeat Simple_repeat 1 20 0 3 679 198 150 0 0 chr3L 12450005 12450045 -12093512 + (GGA)n Simple_repeat Simple_repeat 1 40 0 3 679 185 65 32 0 chr3L 12450230 12450261 -12093296 + (CCGAA)n Simple_repeat Simple_repeat 3 34 0 3 679 32 95 0 0 chr3L 12451660 12451755 -12091802 + AT_rich Low_complexity Low_complexity 1 95 0 3 680 216 0 0 0 chr3L 12452212 12452236 -12091321 + (TTCGG)n Simple_repeat Simple_repeat 4 27 0 3 680 200 111 28 0 chr3L 12454530 12454566 -12088991 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 680 186 118 0 0 chr3L 12455129 12455163 -12088394 + (CATAC)n Simple_repeat Simple_repeat 5 38 0 3 680 234 0 0 0 chr3L 12455325 12455351 -12088206 + (T)n Simple_repeat Simple_repeat 1 26 0 3 680 238 211 0 0 chr3L 12456043 12456095 -12087462 + T-rich Low_complexity Low_complexity 1 52 0 3 680 393 141 0 0 chr3L 12456783 12456854 -12086703 + (CTG)n Simple_repeat Simple_repeat 1 71 0 3 680 330 169 0 0 chr3L 12459203 12459268 -12084289 + (CTG)n Simple_repeat Simple_repeat 3 67 0 3 680 200 170 19 19 chr3L 12460740 12460794 -12082763 + T-rich Low_complexity Low_complexity 4 57 0 3 680 195 167 0 0 chr3L 12460917 12460959 -12082598 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 680 212 291 0 37 chr3L 12461372 12461479 -12082078 + GA-rich Low_complexity Low_complexity 2 104 0 3 680 35 41 0 0 chr3L 12461846 12461895 -12081662 + AT_rich Low_complexity Low_complexity 1 49 0 3 680 22 0 0 0 chr3L 12461973 12461995 -12081562 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 237 163 0 0 chr3L 12462755 12462804 -12080753 + (GGATG)n Simple_repeat Simple_repeat 5 53 0 3 680 22 0 0 0 chr3L 12463287 12463309 -12080248 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 220 176 0 0 chr3L 12463655 12463689 -12079868 + (CCCCAA)n Simple_repeat Simple_repeat 3 36 0 3 680 29 0 0 0 chr3L 12467662 12467691 -12075866 + AT_rich Low_complexity Low_complexity 1 29 0 3 680 22 35 0 0 chr3L 12472622 12472651 -12070906 + AT_rich Low_complexity Low_complexity 1 29 0 3 680 22 0 0 0 chr3L 12473858 12473880 -12069677 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 216 179 0 0 chr3L 12476409 12476448 -12067109 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 680 222 161 0 67 chr3L 12478077 12478137 -12065420 + (TTCCG)n Simple_repeat Simple_repeat 2 57 0 3 680 21 0 0 0 chr3L 12478406 12478427 -12065130 + AT_rich Low_complexity Low_complexity 1 21 0 3 680 21 0 0 0 chr3L 12479770 12479791 -12063766 + AT_rich Low_complexity Low_complexity 1 21 0 3 680 25 51 0 0 chr3L 12481474 12481513 -12062044 + AT_rich Low_complexity Low_complexity 1 39 0 3 680 22 56 0 0 chr3L 12482066 12482102 -12061455 + AT_rich Low_complexity Low_complexity 1 36 0 3 680 28 29 0 0 chr3L 12482234 12482269 -12061288 + AT_rich Low_complexity Low_complexity 1 35 0 3 680 21 57 0 0 chr3L 12482441 12482476 -12061081 + AT_rich Low_complexity Low_complexity 1 35 0 3 680 235 217 0 0 chr3L 12487388 12487434 -12056123 + (CATA)n Simple_repeat Simple_repeat 4 49 0 3 680 31 58 0 0 chr3L 12489635 12489687 -12053870 + AT_rich Low_complexity Low_complexity 1 52 0 3 680 22 0 0 0 chr3L 12494456 12494478 -12049079 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 39 22 0 0 chr3L 12497059 12497105 -12046452 + AT_rich Low_complexity Low_complexity 1 46 0 3 680 22 0 0 0 chr3L 12497141 12497163 -12046394 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 22 0 0 0 chr3L 12501110 12501132 -12042425 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 24 0 0 0 chr3L 12501162 12501186 -12042371 + AT_rich Low_complexity Low_complexity 1 24 0 3 680 21 0 0 0 chr3L 12505063 12505084 -12038473 + AT_rich Low_complexity Low_complexity 1 21 0 3 680 318 293 24 18 chr3L 12510598 12510765 -12032792 + (CAG)n Simple_repeat Simple_repeat 1 168 0 3 680 189 175 0 0 chr3L 12510821 12510861 -12032696 + (CAA)n Simple_repeat Simple_repeat 3 42 0 3 680 283 269 13 13 chr3L 12510872 12510951 -12032606 + (CGG)n Simple_repeat Simple_repeat 3 81 0 3 680 234 0 0 0 chr3L 12512618 12512644 -12030913 + (CCGAA)n Simple_repeat Simple_repeat 3 28 0 3 680 24 32 0 0 chr3L 12514366 12514397 -12029160 + AT_rich Low_complexity Low_complexity 1 31 0 3 680 26 0 0 0 chr3L 12517400 12517426 -12026131 + AT_rich Low_complexity Low_complexity 1 26 0 3 680 195 42 0 0 chr3L 12519290 12519314 -12024243 + (TTC)n Simple_repeat Simple_repeat 2 25 0 3 680 186 43 0 0 chr3L 12519442 12519465 -12024092 + (TTC)n Simple_repeat Simple_repeat 1 23 0 3 680 23 33 0 0 chr3L 12531705 12531735 -12011822 + AT_rich Low_complexity Low_complexity 1 30 0 3 680 22 0 0 0 chr3L 12531950 12531972 -12011585 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 198 0 0 0 chr3L 12532162 12532184 -12011373 + (TAGA)n Simple_repeat Simple_repeat 4 25 0 3 680 29 28 0 0 chr3L 12533396 12533432 -12010125 + AT_rich Low_complexity Low_complexity 1 36 0 3 680 21 36 0 0 chr3L 12534649 12534677 -12008880 + AT_rich Low_complexity Low_complexity 1 28 0 3 680 240 35 0 0 chr3L 12535221 12535250 -12008307 + (GCTG)n Simple_repeat Simple_repeat 4 32 0 3 680 182 105 0 26 chr3L 12539243 12539282 -12004275 + (TAAAAA)n Simple_repeat Simple_repeat 2 39 0 3 680 209 200 0 0 chr3L 12540669 12540719 -12002838 + T-rich Low_complexity Low_complexity 1 50 0 3 680 29 0 0 0 chr3L 12541096 12541125 -12002432 + AT_rich Low_complexity Low_complexity 1 29 0 3 680 249 211 0 14 chr3L 12545811 12545883 -11997674 + CT-rich Low_complexity Low_complexity 3 73 0 3 680 246 105 0 0 chr3L 12547054 12547092 -11996465 + (CAGT)n Simple_repeat Simple_repeat 2 39 0 3 680 24 53 0 0 chr3L 12547614 12547652 -11995905 + AT_rich Low_complexity Low_complexity 1 38 0 3 680 21 0 0 0 chr3L 12548213 12548234 -11995323 + AT_rich Low_complexity Low_complexity 1 21 0 3 680 22 0 0 0 chr3L 12549004 12549026 -11994531 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 24 32 0 0 chr3L 12550054 12550085 -11993472 + AT_rich Low_complexity Low_complexity 1 31 0 3 680 221 229 0 0 chr3L 12551686 12551743 -11991814 + T-rich Low_complexity Low_complexity 1 57 0 3 680 197 119 24 0 chr3L 12551954 12551996 -11991561 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 3 680 288 186 0 0 chr3L 12554936 12554995 -11988562 + (TCCG)n Simple_repeat Simple_repeat 3 61 0 3 680 21 0 0 0 chr3L 12555408 12555429 -11988128 + AT_rich Low_complexity Low_complexity 1 21 0 3 680 222 208 0 0 chr3L 12557430 12557478 -11986079 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 3 680 22 0 0 0 chr3L 12557612 12557634 -11985923 + AT_rich Low_complexity Low_complexity 1 22 0 3 680 180 77 0 0 chr3L 12559164 12559190 -11984367 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 680 210 175 25 0 chr3L 12559625 12559665 -11983892 + (CATTC)n Simple_repeat Simple_repeat 4 44 0 3 680 32 57 0 0 chr3L 12565921 12565974 -11977583 + AT_rich Low_complexity Low_complexity 1 53 0 3 680 207 186 0 23 chr3L 12567904 12567948 -11975609 + (GGATG)n Simple_repeat Simple_repeat 1 43 0 3 680 22 56 0 0 chr3L 12569347 12569383 -11974174 + AT_rich Low_complexity Low_complexity 1 36 0 3 680 28 0 0 0 chr3L 12570372 12570400 -11973157 + AT_rich Low_complexity Low_complexity 1 28 0 3 680 201 176 0 0 chr3L 12570589 12570623 -11972934 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 680 22 56 0 0 chr3L 12571319 12571355 -11972202 + AT_rich Low_complexity Low_complexity 1 36 0 3 680 21 0 0 0 chr3L 12572721 12572742 -11970815 + AT_rich Low_complexity Low_complexity 1 21 0 3 680 194 150 25 0 chr3L 12573706 12573746 -11969811 + (CAG)n Simple_repeat Simple_repeat 1 41 0 3 680 24 0 0 0 chr3L 12573898 12573922 -11969635 + AT_rich Low_complexity Low_complexity 1 24 0 3 680 264 30 0 0 chr3L 12574124 12574157 -11969400 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 680 228 143 0 0 chr3L 12575269 12575311 -11968246 + (A)n Simple_repeat Simple_repeat 1 42 0 3 680 24 32 0 0 chr3L 12577984 12578015 -11965542 + AT_rich Low_complexity Low_complexity 1 31 0 3 680 23 0 0 0 chr3L 12578678 12578701 -11964856 + AT_rich Low_complexity Low_complexity 1 23 0 3 680 34 0 0 0 chr3L 12579536 12579570 -11963987 + AT_rich Low_complexity Low_complexity 1 34 0 3 680 231 152 0 0 chr3L 12579780 12579826 -11963731 + (CAA)n Simple_repeat Simple_repeat 3 48 0 3 680 34 0 0 0 chr3L 12580531 12580565 -11962992 + AT_rich Low_complexity Low_complexity 1 34 0 3 680 28 0 0 0 chr3L 12580680 12580708 -11962849 + AT_rich Low_complexity Low_complexity 1 28 0 3 680 216 211 0 0 chr3L 12581648 12581719 -11961838 + T-rich Low_complexity Low_complexity 1 71 0 3 680 192 77 0 0 chr3L 12581967 12581993 -11961564 + (TATATG)n Simple_repeat Simple_repeat 6 31 0 3 680 195 42 0 0 chr3L 12582026 12582050 -11961507 + (CGG)n Simple_repeat Simple_repeat 1 24 0 3 680 243 61 0 0 chr3L 12582753 12582786 -11960771 + (TTTAA)n Simple_repeat Simple_repeat 4 36 0 3 681 204 194 0 0 chr3L 12583058 12583094 -11960463 + C-rich Low_complexity Low_complexity 1 36 0 3 681 21 0 0 0 chr3L 12583304 12583325 -11960232 + AT_rich Low_complexity Low_complexity 1 21 0 3 681 221 353 0 0 chr3L 12583603 12583688 -11959869 + (CATA)n Simple_repeat Simple_repeat 4 88 0 3 681 339 44 0 0 chr3L 12584763 12584808 -11958749 + (ACTG)n Simple_repeat Simple_repeat 3 47 0 3 681 186 133 0 0 chr3L 12585598 12585628 -11957929 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 681 321 82 0 0 chr3L 12588079 12588128 -11955429 + (CAG)n Simple_repeat Simple_repeat 3 51 0 3 681 300 70 0 0 chr3L 12588286 12588329 -11955228 + (CAG)n Simple_repeat Simple_repeat 3 45 0 3 681 189 74 0 0 chr3L 12588400 12588427 -11955130 + (CAG)n Simple_repeat Simple_repeat 3 29 0 3 681 21 0 0 0 chr3L 12589702 12589723 -11953834 + AT_rich Low_complexity Low_complexity 1 21 0 3 681 228 175 0 0 chr3L 12589948 12590011 -11953546 + (CAAAC)n Simple_repeat Simple_repeat 2 64 0 3 681 198 0 0 0 chr3L 12590333 12590355 -11953202 + (CATA)n Simple_repeat Simple_repeat 3 24 0 3 681 342 147 0 0 chr3L 12590643 12590711 -11952846 + (CATAC)n Simple_repeat Simple_repeat 2 69 0 3 681 48 32 0 0 chr3L 12591538 12591600 -11951957 + AT_rich Low_complexity Low_complexity 1 62 0 3 681 231 125 0 0 chr3L 12592570 12592610 -11950947 + (GCTG)n Simple_repeat Simple_repeat 4 43 0 3 681 21 57 0 0 chr3L 12593870 12593905 -11949652 + AT_rich Low_complexity Low_complexity 1 35 0 3 681 31 26 0 0 chr3L 12596149 12596187 -11947370 + AT_rich Low_complexity Low_complexity 1 38 0 3 681 189 94 0 0 chr3L 12600080 12600112 -11943445 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 681 22 88 0 0 chr3L 12600744 12600801 -11942756 + AT_rich Low_complexity Low_complexity 1 57 0 3 681 25 0 0 0 chr3L 12602169 12602194 -11941363 + AT_rich Low_complexity Low_complexity 1 25 0 3 681 22 70 0 0 chr3L 12604429 12604472 -11939085 + AT_rich Low_complexity Low_complexity 1 43 0 3 681 312 70 0 0 chr3L 12604767 12604810 -11938747 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 681 213 196 0 0 chr3L 12605125 12605171 -11938386 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 681 377 133 13 0 chr3L 12606873 12606948 -11936609 + (CATAC)n Simple_repeat Simple_repeat 5 80 0 3 681 181 73 0 113 chr3L 12608159 12608221 -11935336 + (CAACC)n Simple_repeat Simple_repeat 2 56 0 3 681 30 27 0 0 chr3L 12610862 12610899 -11932658 + AT_rich Low_complexity Low_complexity 1 37 0 3 681 255 103 0 0 chr3L 12611895 12611934 -11931623 + (GCTG)n Simple_repeat Simple_repeat 1 39 0 3 681 279 130 0 0 chr3L 12612921 12612975 -11930582 + (CAG)n Simple_repeat Simple_repeat 3 56 0 3 681 288 120 0 0 chr3L 12613219 12613269 -11930288 + (CAG)n Simple_repeat Simple_repeat 1 50 0 3 681 237 108 0 0 chr3L 12613542 12613579 -11929978 + (CAG)n Simple_repeat Simple_repeat 1 37 0 3 681 339 92 46 0 chr3L 12614106 12614171 -11929386 + (TGG)n Simple_repeat Simple_repeat 2 69 0 3 681 24 32 0 0 chr3L 12616761 12616792 -11926765 + AT_rich Low_complexity Low_complexity 1 31 0 3 681 214 264 0 0 chr3L 12617184 12617237 -11926320 + (CTG)n Simple_repeat Simple_repeat 2 54 0 3 681 25 31 0 0 chr3L 12617909 12617941 -11925616 + AT_rich Low_complexity Low_complexity 1 32 0 3 681 22 0 0 0 chr3L 12618312 12618334 -11925223 + AT_rich Low_complexity Low_complexity 1 22 0 3 681 22 35 0 0 chr3L 12620382 12620411 -11923146 + AT_rich Low_complexity Low_complexity 1 29 0 3 681 219 88 0 0 chr3L 12620946 12620980 -11922577 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 681 297 89 0 0 chr3L 12625963 12626008 -11917549 + (CGA)n Simple_repeat Simple_repeat 3 47 0 3 681 24 0 0 0 chr3L 12626171 12626195 -11917362 + AT_rich Low_complexity Low_complexity 1 24 0 3 681 21 71 0 0 chr3L 12626264 12626306 -11917251 + AT_rich Low_complexity Low_complexity 1 42 0 3 681 243 133 0 0 chr3L 12626687 12626732 -11916825 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 681 21 0 0 0 chr3L 12628298 12628319 -11915238 + GC_rich Low_complexity Low_complexity 1 21 0 3 681 23 0 0 0 chr3L 12629399 12629422 -11914135 + AT_rich Low_complexity Low_complexity 1 23 0 3 681 189 0 0 0 chr3L 12629442 12629463 -11914094 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 681 240 111 0 0 chr3L 12631056 12631092 -11912465 + (ATGGTG)n Simple_repeat Simple_repeat 3 38 0 3 681 267 146 0 0 chr3L 12631578 12631633 -11911924 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 681 219 36 0 0 chr3L 12631718 12631746 -11911811 + (CAAAAA)n Simple_repeat Simple_repeat 4 31 0 3 681 206 278 0 0 chr3L 12631789 12631843 -11911714 + (TGGG)n Simple_repeat Simple_repeat 2 55 0 3 681 21 0 0 0 chr3L 12632023 12632044 -11911513 + AT_rich Low_complexity Low_complexity 1 21 0 3 681 26 74 0 0 chr3L 12632159 12632213 -11911344 + AT_rich Low_complexity Low_complexity 1 54 0 3 681 303 161 0 0 chr3L 12634500 12634556 -11909001 + (TGAA)n Simple_repeat Simple_repeat 4 59 0 3 681 26 30 0 0 chr3L 12637752 12637785 -11905772 + AT_rich Low_complexity Low_complexity 1 33 0 3 681 31 44 0 0 chr3L 12639077 12639122 -11904435 + AT_rich Low_complexity Low_complexity 1 45 0 3 681 21 0 0 0 chr3L 12639176 12639197 -11904360 + AT_rich Low_complexity Low_complexity 1 21 0 3 681 22 56 0 0 chr3L 12643912 12643948 -11899609 + AT_rich Low_complexity Low_complexity 1 36 0 3 681 21 36 0 0 chr3L 12647021 12647049 -11896508 + AT_rich Low_complexity Low_complexity 1 28 0 3 681 30 0 0 0 chr3L 12647668 12647698 -11895859 + AT_rich Low_complexity Low_complexity 1 30 0 3 681 186 43 0 0 chr3L 12650811 12650834 -11892723 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 681 199 161 18 18 chr3L 12651052 12651109 -11892448 + (CGGA)n Simple_repeat Simple_repeat 1 57 0 3 681 235 232 0 0 chr3L 12651483 12651539 -11892018 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 3 681 201 39 0 0 chr3L 12652583 12652609 -11890948 + (GAATG)n Simple_repeat Simple_repeat 3 28 0 3 681 24 32 0 0 chr3L 12653255 12653286 -11890271 + AT_rich Low_complexity Low_complexity 1 31 0 3 681 243 133 0 0 chr3L 12653937 12653982 -11889575 + (GATTG)n Simple_repeat Simple_repeat 3 47 0 3 681 22 0 0 0 chr3L 12654105 12654127 -11889430 + AT_rich Low_complexity Low_complexity 1 22 0 3 681 249 57 0 0 chr3L 12654227 12654262 -11889295 + (CGAAT)n Simple_repeat Simple_repeat 3 37 0 3 681 285 75 0 0 chr3L 12654529 12654569 -11888988 + (CAG)n Simple_repeat Simple_repeat 1 40 0 3 681 220 256 0 0 chr3L 12654601 12654644 -11888913 + (CGGA)n Simple_repeat Simple_repeat 2 44 0 3 681 219 88 0 0 chr3L 12654906 12654940 -11888617 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 3 681 38 51 0 0 chr3L 12655369 12655428 -11888129 + AT_rich Low_complexity Low_complexity 1 59 0 3 681 37 0 0 0 chr3L 12656583 12656620 -11886937 + AT_rich Low_complexity Low_complexity 1 37 0 3 681 28 48 0 0 chr3L 12660060 12660102 -11883455 + AT_rich Low_complexity Low_complexity 1 42 0 3 681 216 175 0 0 chr3L 12660530 12660570 -11882987 + (GAGTG)n Simple_repeat Simple_repeat 1 40 0 3 681 25 0 0 0 chr3L 12661187 12661212 -11882345 + AT_rich Low_complexity Low_complexity 1 25 0 3 681 26 0 0 0 chr3L 12662103 12662129 -11881428 + AT_rich Low_complexity Low_complexity 1 26 0 3 681 186 71 0 0 chr3L 12663466 12663494 -11880063 + (A)n Simple_repeat Simple_repeat 1 28 0 3 681 25 0 0 0 chr3L 12665119 12665144 -11878413 + AT_rich Low_complexity Low_complexity 1 25 0 3 681 21 57 0 0 chr3L 12666945 12666980 -11876577 + AT_rich Low_complexity Low_complexity 1 35 0 3 681 26 64 0 0 chr3L 12672227 12672274 -11871283 + AT_rich Low_complexity Low_complexity 1 47 0 3 681 24 0 0 0 chr3L 12672860 12672884 -11870673 + AT_rich Low_complexity Low_complexity 1 24 0 3 681 194 57 0 54 chr3L 12673123 12673160 -11870397 + (TATAG)n Simple_repeat Simple_repeat 1 35 0 3 681 221 163 0 0 chr3L 12677373 12677416 -11866141 + A-rich Low_complexity Low_complexity 1 43 0 3 681 22 70 0 0 chr3L 12678317 12678360 -11865197 + AT_rich Low_complexity Low_complexity 1 43 0 3 681 26 0 0 0 chr3L 12678431 12678457 -11865100 + AT_rich Low_complexity Low_complexity 1 26 0 3 681 225 213 16 0 chr3L 12680680 12680741 -11862816 + (CATTC)n Simple_repeat Simple_repeat 3 64 0 3 681 205 205 0 0 chr3L 12681501 12681540 -11862017 + A-rich Low_complexity Low_complexity 1 39 0 3 681 258 95 0 0 chr3L 12681885 12681927 -11861630 + (CTG)n Simple_repeat Simple_repeat 1 42 0 3 681 225 94 0 0 chr3L 12683458 12683490 -11860067 + (GCTTG)n Simple_repeat Simple_repeat 4 35 0 3 681 216 196 0 51 chr3L 12683986 12684045 -11859512 + CT-rich Low_complexity Low_complexity 2 57 0 3 681 246 151 11 55 chr3L 12684128 12684219 -11859338 - ROO_I LTR Pao -7529 727 641 3 681 43 88 0 0 chr3L 12684571 12684684 -11858873 + AT_rich Low_complexity Low_complexity 1 113 0 3 681 238 216 0 0 chr3L 12685344 12685395 -11858162 + T-rich Low_complexity Low_complexity 1 51 0 3 681 191 36 36 0 chr3L 12685691 12685719 -11857838 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 681 396 184 0 28 chr3L 12685752 12685858 -11857699 + ROO_I LTR Pao 641 743 -7513 3 681 311 96 0 19 chr3L 12685965 12686018 -11857539 + (CTG)n Simple_repeat Simple_repeat 2 53 0 3 681 255 61 0 0 chr3L 12688773 12688806 -11854751 + (CATAC)n Simple_repeat Simple_repeat 2 34 0 3 681 226 196 0 21 chr3L 12688862 12688909 -11854648 + (TTG)n Simple_repeat Simple_repeat 1 46 0 3 681 33 0 0 0 chr3L 12689438 12689471 -11854086 + AT_rich Low_complexity Low_complexity 1 33 0 3 681 205 191 0 0 chr3L 12691504 12691546 -11852011 + A-rich Low_complexity Low_complexity 1 42 0 3 681 207 114 29 0 chr3L 12692011 12692046 -11851511 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 681 222 176 0 0 chr3L 12692726 12692777 -11850780 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 3 681 26 0 0 0 chr3L 12693094 12693120 -11850437 + AT_rich Low_complexity Low_complexity 1 26 0 3 681 204 97 0 0 chr3L 12693732 12693763 -11849794 + (CCGAA)n Simple_repeat Simple_repeat 5 35 0 3 681 225 102 16 33 chr3L 12694250 12694311 -11849246 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 681 194 156 22 0 chr3L 12694393 12694438 -11849119 + (CAA)n Simple_repeat Simple_repeat 1 46 0 3 681 21 89 0 0 chr3L 12694644 12694700 -11848857 + AT_rich Low_complexity Low_complexity 1 56 0 3 681 295 238 0 0 chr3L 12696000 12696080 -11847477 - ROO_I LTR Pao -7518 738 659 3 681 215 245 0 0 chr3L 12698798 12698851 -11844706 + A-rich Low_complexity Low_complexity 1 53 0 3 681 208 317 0 0 chr3L 12700705 12700765 -11842792 + (CGA)n Simple_repeat Simple_repeat 1 60 0 3 681 218 188 0 0 chr3L 12701339 12701387 -11842170 + (CAG)n Simple_repeat Simple_repeat 1 48 0 3 681 231 36 0 0 chr3L 12702660 12702688 -11840869 + (CATA)n Simple_repeat Simple_repeat 2 29 0 3 681 22 0 0 0 chr3L 12703108 12703130 -11840427 + AT_rich Low_complexity Low_complexity 1 22 0 3 681 183 42 0 0 chr3L 12707495 12707519 -11836038 + (T)n Simple_repeat Simple_repeat 1 24 0 3 681 236 204 0 0 chr3L 12708044 12708093 -11835464 + A-rich Low_complexity Low_complexity 1 49 0 3 681 207 265 0 20 chr3L 12708885 12708935 -11834622 + (TCCG)n Simple_repeat Simple_repeat 2 50 0 3 681 227 79 26 0 chr3L 12709153 12709191 -11834366 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 681 24 32 0 0 chr3L 12709648 12709679 -11833878 + AT_rich Low_complexity Low_complexity 1 31 0 3 681 207 146 0 0 chr3L 12710332 12710373 -11833184 + (ATG)n Simple_repeat Simple_repeat 2 42 0 3 681 25 31 0 0 chr3L 12710821 12710853 -11832704 + AT_rich Low_complexity Low_complexity 1 32 0 3 681 23 54 0 0 chr3L 12710936 12710973 -11832584 + AT_rich Low_complexity Low_complexity 1 37 0 3 681 24 32 0 0 chr3L 12712135 12712166 -11831391 + AT_rich Low_complexity Low_complexity 1 31 0 3 681 218 213 0 21 chr3L 12713142 12713190 -11830367 + (CAGTT)n Simple_repeat Simple_repeat 1 47 0 3 682 53 40 0 0 chr3L 12715247 12715321 -11828236 + AT_rich Low_complexity Low_complexity 1 74 0 3 682 21 36 0 0 chr3L 12715848 12715876 -11827681 + AT_rich Low_complexity Low_complexity 1 28 0 3 682 180 0 0 0 chr3L 12716752 12716772 -11826785 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 682 21 36 0 0 chr3L 12717069 12717097 -11826460 + AT_rich Low_complexity Low_complexity 1 28 0 3 682 21 36 0 0 chr3L 12719040 12719068 -11824489 + AT_rich Low_complexity Low_complexity 1 28 0 3 682 22 35 0 0 chr3L 12719961 12719990 -11823567 + AT_rich Low_complexity Low_complexity 1 29 0 3 682 201 39 0 0 chr3L 12720656 12720682 -11822875 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 682 38 22 0 0 chr3L 12721164 12721209 -11822348 + AT_rich Low_complexity Low_complexity 1 45 0 3 682 23 78 0 0 chr3L 12723257 12723308 -11820249 + AT_rich Low_complexity Low_complexity 1 51 0 3 682 27 0 0 0 chr3L 12725608 12725635 -11817922 + AT_rich Low_complexity Low_complexity 1 27 0 3 682 23 0 0 0 chr3L 12725946 12725969 -11817588 + AT_rich Low_complexity Low_complexity 1 23 0 3 682 28 29 0 0 chr3L 12731197 12731232 -11812325 + AT_rich Low_complexity Low_complexity 1 35 0 3 682 23 54 0 0 chr3L 12734168 12734205 -11809352 + AT_rich Low_complexity Low_complexity 1 37 0 3 682 27 0 0 0 chr3L 12734623 12734650 -11808907 + AT_rich Low_complexity Low_complexity 1 27 0 3 682 21 0 0 0 chr3L 12734743 12734764 -11808793 + AT_rich Low_complexity Low_complexity 1 21 0 3 682 24 67 0 0 chr3L 12735260 12735305 -11808252 + AT_rich Low_complexity Low_complexity 1 45 0 3 682 25 51 0 0 chr3L 12736747 12736786 -11806771 + AT_rich Low_complexity Low_complexity 1 39 0 3 682 27 0 0 0 chr3L 12737863 12737890 -11805667 + AT_rich Low_complexity Low_complexity 1 27 0 3 682 283 242 0 0 chr3L 12738275 12738341 -11805216 - DNAREP1_DM LINE Penelope -528 66 1 3 682 30 45 0 0 chr3L 12738341 12738385 -11805172 + AT_rich Low_complexity Low_complexity 1 44 0 3 682 247 319 0 0 chr3L 12743968 12744037 -11799520 + (CATA)n Simple_repeat Simple_repeat 3 71 0 3 682 23 0 0 0 chr3L 12747319 12747342 -11796215 + AT_rich Low_complexity Low_complexity 1 23 0 3 682 27 29 0 0 chr3L 12749466 12749500 -11794057 + AT_rich Low_complexity Low_complexity 1 34 0 3 682 22 35 0 0 chr3L 12766883 12766912 -11776645 + AT_rich Low_complexity Low_complexity 1 29 0 3 682 22 56 0 0 chr3L 12767039 12767075 -11776482 + AT_rich Low_complexity Low_complexity 1 36 0 3 682 23 0 0 0 chr3L 12778520 12778543 -11765014 + AT_rich Low_complexity Low_complexity 1 23 0 3 682 42 36 0 0 chr3L 12782319 12782375 -11761182 + AT_rich Low_complexity Low_complexity 1 56 0 3 682 21 0 0 0 chr3L 12783830 12783851 -11759706 + AT_rich Low_complexity Low_complexity 1 21 0 3 682 180 0 0 0 chr3L 12793397 12793417 -11750140 + (A)n Simple_repeat Simple_repeat 1 20 0 3 682 22 0 0 0 chr3L 12795683 12795705 -11747852 + AT_rich Low_complexity Low_complexity 1 22 0 3 682 189 74 0 0 chr3L 12795968 12795995 -11747562 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 682 26 64 0 0 chr3L 12796206 12796253 -11747304 + AT_rich Low_complexity Low_complexity 1 47 0 3 682 218 275 14 0 chr3L 12796494 12796563 -11746994 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 3 682 186 103 0 0 chr3L 12797586 12797615 -11745942 + (TC)n Simple_repeat Simple_repeat 1 29 0 3 682 207 320 0 0 chr3L 12797962 12798040 -11745517 + (CACG)n Simple_repeat Simple_repeat 3 80 0 3 682 31 82 0 0 chr3L 12799781 12799854 -11743703 + AT_rich Low_complexity Low_complexity 1 73 0 3 682 37 62 0 0 chr3L 12808530 12808595 -11734962 + AT_rich Low_complexity Low_complexity 1 65 0 3 682 29 0 0 0 chr3L 12817784 12817813 -11725744 + AT_rich Low_complexity Low_complexity 1 29 0 3 682 23 33 0 0 chr3L 12817984 12818014 -11725543 + AT_rich Low_complexity Low_complexity 1 30 0 3 682 21 0 0 0 chr3L 12818156 12818177 -11725380 + AT_rich Low_complexity Low_complexity 1 21 0 3 682 23 0 0 0 chr3L 12819943 12819966 -11723591 + AT_rich Low_complexity Low_complexity 1 23 0 3 682 26 93 0 0 chr3L 12827003 12827078 -11716479 + AT_rich Low_complexity Low_complexity 1 75 0 3 682 26 0 0 0 chr3L 12828497 12828523 -11715034 + AT_rich Low_complexity Low_complexity 1 26 0 3 682 42 48 0 0 chr3L 12828537 12828600 -11714957 + AT_rich Low_complexity Low_complexity 1 63 0 3 682 249 83 0 0 chr3L 12829709 12829745 -11713812 + (CAT)n Simple_repeat Simple_repeat 2 37 0 3 682 27 0 0 0 chr3L 12831698 12831725 -11711832 + AT_rich Low_complexity Low_complexity 1 27 0 3 682 33 43 0 0 chr3L 12837184 12837231 -11706326 + AT_rich Low_complexity Low_complexity 1 47 0 3 682 21 0 0 0 chr3L 12840270 12840291 -11703266 + AT_rich Low_complexity Low_complexity 1 21 0 3 682 21 57 0 0 chr3L 12840852 12840887 -11702670 + AT_rich Low_complexity Low_complexity 1 35 0 3 683 24 32 0 0 chr3L 12846236 12846267 -11697290 + AT_rich Low_complexity Low_complexity 1 31 0 3 683 24 32 0 0 chr3L 12846433 12846464 -11697093 + AT_rich Low_complexity Low_complexity 1 31 0 3 683 25 31 0 0 chr3L 12847374 12847406 -11696151 + AT_rich Low_complexity Low_complexity 1 32 0 3 683 21 0 0 0 chr3L 12850412 12850433 -11693124 + AT_rich Low_complexity Low_complexity 1 21 0 3 683 28 79 0 0 chr3L 12850602 12850665 -11692892 + AT_rich Low_complexity Low_complexity 1 63 0 3 683 21 71 0 0 chr3L 12851138 12851180 -11692377 + AT_rich Low_complexity Low_complexity 1 42 0 3 683 24 53 0 0 chr3L 12851394 12851432 -11692125 + AT_rich Low_complexity Low_complexity 1 38 0 3 683 22 0 0 0 chr3L 12852094 12852116 -11691441 + AT_rich Low_complexity Low_complexity 1 22 0 3 683 33 0 0 0 chr3L 12853860 12853893 -11689664 + AT_rich Low_complexity Low_complexity 1 33 0 3 683 210 37 0 0 chr3L 12856515 12856542 -11687015 + (CAA)n Simple_repeat Simple_repeat 1 27 0 3 683 31 76 0 0 chr3L 12857153 12857219 -11686338 + AT_rich Low_complexity Low_complexity 1 66 0 3 683 519 71 11 23 chr3L 12857736 12857823 -11685734 + (CAA)n Simple_repeat Simple_repeat 3 88 0 3 683 24 53 0 0 chr3L 12858289 12858327 -11685230 + AT_rich Low_complexity Low_complexity 1 38 0 3 683 189 0 0 0 chr3L 12858360 12858381 -11685176 + (TAA)n Simple_repeat Simple_repeat 1 21 0 3 683 187 93 47 0 chr3L 12858992 12859035 -11684522 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 3 683 223 174 0 0 chr3L 12860207 12860253 -11683304 + A-rich Low_complexity Low_complexity 1 46 0 3 683 21 36 0 0 chr3L 12860761 12860789 -11682768 + AT_rich Low_complexity Low_complexity 1 28 0 3 683 22 0 0 0 chr3L 12862255 12862277 -11681280 + AT_rich Low_complexity Low_complexity 1 22 0 3 683 198 91 0 0 chr3L 12863843 12863876 -11679681 + (A)n Simple_repeat Simple_repeat 1 33 0 3 683 207 88 0 29 chr3L 12866090 12866125 -11677432 + (TTTCG)n Simple_repeat Simple_repeat 2 35 0 3 683 23 54 0 0 chr3L 12866312 12866349 -11677208 + AT_rich Low_complexity Low_complexity 1 37 0 3 683 21 0 0 0 chr3L 12866442 12866463 -11677094 + AT_rich Low_complexity Low_complexity 1 21 0 3 683 198 71 0 0 chr3L 12867233 12867261 -11676296 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 683 19150 4 0 4 chr3L 12868103 12870312 -11673245 - LINEJ1_DM LINE Jockey 0 5020 2821 3 683 21 0 0 0 chr3L 12870771 12870792 -11672765 + AT_rich Low_complexity Low_complexity 1 21 0 3 683 34 65 0 0 chr3L 12871507 12871569 -11671988 + AT_rich Low_complexity Low_complexity 1 62 0 3 683 204 40 0 0 chr3L 12873107 12873132 -11670425 + (CAGAA)n Simple_repeat Simple_repeat 3 27 0 3 683 21 0 0 0 chr3L 12873465 12873486 -11670071 + AT_rich Low_complexity Low_complexity 1 21 0 3 683 21 0 0 0 chr3L 12874137 12874158 -11669399 + AT_rich Low_complexity Low_complexity 1 21 0 3 683 29 0 0 0 chr3L 12874950 12874979 -11668578 + AT_rich Low_complexity Low_complexity 1 29 0 3 683 26 0 0 0 chr3L 12876839 12876865 -11666692 + AT_rich Low_complexity Low_complexity 1 26 0 3 683 192 200 0 0 chr3L 12885205 12885250 -11658307 + (CAA)n Simple_repeat Simple_repeat 2 46 0 3 683 198 71 0 0 chr3L 12885669 12885697 -11657860 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 683 46 68 0 0 chr3L 12886243 12886331 -11657226 + AT_rich Low_complexity Low_complexity 1 88 0 3 683 345 47 0 0 chr3L 12888267 12888310 -11655247 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 683 24 32 0 0 chr3L 12888773 12888804 -11654753 + AT_rich Low_complexity Low_complexity 1 31 0 3 683 204 269 19 19 chr3L 12889627 12889733 -11653824 + A-rich Low_complexity Low_complexity 3 108 0 3 683 23 0 0 0 chr3L 12891178 12891201 -11652356 + AT_rich Low_complexity Low_complexity 1 23 0 3 683 22 88 0 0 chr3L 12892436 12892493 -11651064 + AT_rich Low_complexity Low_complexity 1 57 0 3 683 28 29 0 0 chr3L 12893789 12893824 -11649733 + AT_rich Low_complexity Low_complexity 1 35 0 3 683 270 164 0 0 chr3L 12899678 12899733 -11643824 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 683 24 32 0 0 chr3L 12899833 12899864 -11643693 + AT_rich Low_complexity Low_complexity 1 31 0 3 683 24 0 0 0 chr3L 12902284 12902308 -11641249 + AT_rich Low_complexity Low_complexity 1 24 0 3 683 233 208 0 0 chr3L 12906642 12906690 -11636867 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 3 683 33 43 0 0 chr3L 12908715 12908762 -11634795 + AT_rich Low_complexity Low_complexity 1 47 0 3 683 195 139 0 0 chr3L 12911856 12911892 -11631665 + (A)n Simple_repeat Simple_repeat 1 36 0 3 683 47321 6 0 0 chr3L 12912440 12917662 -11625895 - DMRT1B LINE R1 0 5183 1 3 683 207 69 0 0 chr3L 12917899 12917928 -11625629 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 683 21 0 0 0 chr3L 12919618 12919639 -11623918 + AT_rich Low_complexity Low_complexity 1 21 0 3 683 25 0 0 0 chr3L 12922788 12922813 -11620744 + AT_rich Low_complexity Low_complexity 1 25 0 3 683 363 69 259 0 chr3L 12922865 12922923 -11620634 - DNAREP1_DM LINE Penelope 0 594 522 3 683 280 211 0 0 chr3L 12922940 12922992 -11620565 - DNAREP1_DM LINE Penelope -535 59 8 3 683 25 51 0 0 chr3L 12922998 12923037 -11620520 + AT_rich Low_complexity Low_complexity 1 39 0 3 683 21 57 0 0 chr3L 12927370 12927405 -11616152 + AT_rich Low_complexity Low_complexity 1 35 0 3 683 27 29 0 0 chr3L 12927452 12927486 -11616071 + AT_rich Low_complexity Low_complexity 1 34 0 3 683 198 71 0 0 chr3L 12928311 12928339 -11615218 + (T)n Simple_repeat Simple_repeat 1 28 0 3 683 23 33 0 0 chr3L 12931579 12931609 -11611948 + AT_rich Low_complexity Low_complexity 1 30 0 3 683 29 0 0 0 chr3L 12934327 12934356 -11609201 + AT_rich Low_complexity Low_complexity 1 29 0 3 683 21 36 0 0 chr3L 12935122 12935150 -11608407 + AT_rich Low_complexity Low_complexity 1 28 0 3 683 237 163 0 0 chr3L 12935737 12935786 -11607771 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 683 38 39 0 0 chr3L 12937031 12937083 -11606474 + AT_rich Low_complexity Low_complexity 1 52 0 3 683 213 39 0 0 chr3L 12940774 12940800 -11602757 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 683 22 0 0 0 chr3L 12942273 12942295 -11601262 + AT_rich Low_complexity Low_complexity 1 22 0 3 683 264 77 0 0 chr3L 12942593 12942632 -11600925 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 683 30 69 0 0 chr3L 12946777 12946835 -11596722 + AT_rich Low_complexity Low_complexity 1 58 0 3 683 394 162 0 0 chr3L 12946843 12946911 -11596646 + DNAREP1_DM LINE Penelope 369 436 -158 3 683 245 33 0 0 chr3L 12946909 12946939 -11596618 + DNAREP1_DM LINE Penelope 565 594 0 3 683 22 0 0 0 chr3L 12949723 12949745 -11593812 + AT_rich Low_complexity Low_complexity 1 22 0 3 683 2273 7 0 0 chr3L 12950941 12951217 -11592340 - Copia_LTR LTR Copia 0 276 1 3 683 15026 2 0 0 chr3L 12951217 12952984 -11590573 - Copia_I LTR Copia 0 4593 2827 3 683 17938 2 12 0 chr3L 12952987 12955089 -11588468 - Copia_I LTR Copia -2466 2127 1 3 683 2273 7 0 0 chr3L 12955089 12955365 -11588192 - Copia_LTR LTR Copia 0 276 1 3 683 22 0 0 0 chr3L 12957268 12957290 -11586267 + AT_rich Low_complexity Low_complexity 1 22 0 3 683 27 29 0 0 chr3L 12965593 12965627 -11577930 + AT_rich Low_complexity Low_complexity 1 34 0 3 684 216 0 0 0 chr3L 12979530 12979554 -11564003 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 684 21 0 0 0 chr3L 12979730 12979751 -11563806 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 27 0 0 0 chr3L 12980531 12980558 -11562999 + AT_rich Low_complexity Low_complexity 1 27 0 3 684 26 0 0 0 chr3L 12983675 12983701 -11559856 + AT_rich Low_complexity Low_complexity 1 26 0 3 684 27 49 0 0 chr3L 12983747 12983788 -11559769 + AT_rich Low_complexity Low_complexity 1 41 0 3 684 36 23 0 0 chr3L 12983888 12983931 -11559626 + AT_rich Low_complexity Low_complexity 1 43 0 3 684 182 150 0 24 chr3L 12985306 12985347 -11558210 + GA-rich Low_complexity Low_complexity 5 44 0 3 684 180 125 0 0 chr3L 12991310 12991342 -11552215 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 684 219 222 24 12 chr3L 12991744 12991826 -11551731 + (TATAA)n Simple_repeat Simple_repeat 5 87 0 3 684 180 77 0 0 chr3L 12995794 12995820 -11547737 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 684 46 0 0 0 chr3L 12998549 12998595 -11544962 + AT_rich Low_complexity Low_complexity 1 46 0 3 684 23 68 0 0 chr3L 12998636 12998680 -11544877 + AT_rich Low_complexity Low_complexity 1 44 0 3 684 881 86 83 26 chr3L 12999588 12999744 -11543813 - DNAREP1_DM LINE Penelope -426 168 4 3 684 32 43 0 0 chr3L 13001417 13001463 -11542094 + AT_rich Low_complexity Low_complexity 1 46 0 3 684 23 33 0 0 chr3L 13002430 13002460 -11541097 + AT_rich Low_complexity Low_complexity 1 30 0 3 684 21 57 0 0 chr3L 13002528 13002563 -11540994 + AT_rich Low_complexity Low_complexity 1 35 0 3 684 21 0 0 0 chr3L 13004994 13005015 -11538542 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 21 0 0 0 chr3L 13005140 13005161 -11538396 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 39 38 0 0 chr3L 13008715 13008768 -11534789 + AT_rich Low_complexity Low_complexity 1 53 0 3 684 21 71 0 0 chr3L 13008867 13008909 -11534648 + AT_rich Low_complexity Low_complexity 1 42 0 3 684 40 37 0 0 chr3L 13011223 13011277 -11532280 + AT_rich Low_complexity Low_complexity 1 54 0 3 684 25 0 0 0 chr3L 13015933 13015958 -11527599 + AT_rich Low_complexity Low_complexity 1 25 0 3 684 21 0 0 0 chr3L 13020339 13020360 -11523197 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 362 189 36 54 chr3L 13021863 13021975 -11521582 + ROO_I LTR Pao 634 743 -7513 3 684 279 150 0 0 chr3L 13022309 13022369 -11521188 + (CCAA)n Simple_repeat Simple_repeat 1 60 0 3 684 224 100 0 24 chr3L 13026978 13027019 -11516538 + (CATA)n Simple_repeat Simple_repeat 3 42 0 3 684 318 115 0 0 chr3L 13028605 13028657 -11514900 + (ATTG)n Simple_repeat Simple_repeat 3 54 0 3 684 198 0 0 0 chr3L 13029316 13029338 -11514219 + (GCTG)n Simple_repeat Simple_repeat 2 23 0 3 684 189 154 0 0 chr3L 13032980 13033019 -11510538 + GA-rich Low_complexity Low_complexity 5 43 0 3 684 207 258 0 0 chr3L 13033232 13033298 -11510259 + GA-rich Low_complexity Low_complexity 2 67 0 3 684 258 116 0 0 chr3L 13037861 13037904 -11505653 + (CAA)n Simple_repeat Simple_repeat 3 45 0 3 684 194 136 23 0 chr3L 13039521 13039565 -11503992 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 684 227 204 0 0 chr3L 13039695 13039744 -11503813 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 684 183 100 0 0 chr3L 13043270 13043300 -11500257 + (CATTC)n Simple_repeat Simple_repeat 5 34 0 3 684 201 147 0 0 chr3L 13045246 13045280 -11498277 + (TCC)n Simple_repeat Simple_repeat 1 34 0 3 684 25 51 0 0 chr3L 13045778 13045817 -11497740 + AT_rich Low_complexity Low_complexity 1 39 0 3 684 22 35 0 0 chr3L 13047870 13047899 -11495658 + AT_rich Low_complexity Low_complexity 1 29 0 3 684 48 100 0 0 chr3L 13049612 13049772 -11493785 + AT_rich Low_complexity Low_complexity 1 160 0 3 684 22 35 0 0 chr3L 13052500 13052529 -11491028 + AT_rich Low_complexity Low_complexity 1 29 0 3 684 61 0 0 0 chr3L 13054144 13054205 -11489352 + AT_rich Low_complexity Low_complexity 1 61 0 3 684 21 0 0 0 chr3L 13056363 13056384 -11487173 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 22 35 0 0 chr3L 13057101 13057130 -11486427 + AT_rich Low_complexity Low_complexity 1 29 0 3 684 204 143 0 0 chr3L 13058297 13058339 -11485218 + (CAGC)n Simple_repeat Simple_repeat 3 44 0 3 684 24 77 0 0 chr3L 13059498 13059550 -11484007 + AT_rich Low_complexity Low_complexity 1 52 0 3 684 22 0 0 0 chr3L 13060847 13060869 -11482688 + AT_rich Low_complexity Low_complexity 1 22 0 3 684 21 0 0 0 chr3L 13063630 13063651 -11479906 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 209 229 16 0 chr3L 13068902 13068963 -11474594 + A-rich Low_complexity Low_complexity 4 65 0 3 684 204 40 0 0 chr3L 13069592 13069617 -11473940 + (CAT)n Simple_repeat Simple_repeat 1 25 0 3 684 28 29 0 0 chr3L 13070066 13070101 -11473456 + AT_rich Low_complexity Low_complexity 1 35 0 3 684 25 51 0 0 chr3L 13070143 13070182 -11473375 + AT_rich Low_complexity Low_complexity 1 39 0 3 684 226 208 0 36 chr3L 13073527 13073582 -11469975 + (CATCC)n Simple_repeat Simple_repeat 5 57 0 3 684 213 39 0 0 chr3L 13073586 13073612 -11469945 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 3 684 195 42 0 0 chr3L 13073867 13073891 -11469666 + (CACTC)n Simple_repeat Simple_repeat 2 25 0 3 684 22 0 0 0 chr3L 13080185 13080207 -11463350 + AT_rich Low_complexity Low_complexity 1 22 0 3 684 23 33 0 0 chr3L 13086419 13086449 -11457108 + AT_rich Low_complexity Low_complexity 1 30 0 3 684 21 71 0 0 chr3L 13087348 13087390 -11456167 + AT_rich Low_complexity Low_complexity 1 42 0 3 684 21 0 0 0 chr3L 13087727 13087748 -11455809 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 22 0 0 0 chr3L 13093420 13093442 -11450115 + AT_rich Low_complexity Low_complexity 1 22 0 3 684 206 219 0 0 chr3L 13093496 13093537 -11450020 + A-rich Low_complexity Low_complexity 1 41 0 3 684 21 95 0 0 chr3L 13094155 13094218 -11449339 + AT_rich Low_complexity Low_complexity 1 63 0 3 684 22 0 0 0 chr3L 13095452 13095474 -11448083 + AT_rich Low_complexity Low_complexity 1 22 0 3 684 24 0 0 0 chr3L 13096396 13096420 -11447137 + AT_rich Low_complexity Low_complexity 1 24 0 3 684 30 83 0 0 chr3L 13098223 13098295 -11445262 + AT_rich Low_complexity Low_complexity 1 72 0 3 684 216 0 0 0 chr3L 13098589 13098613 -11444944 + (A)n Simple_repeat Simple_repeat 1 24 0 3 684 192 40 0 0 chr3L 13099362 13099387 -11444170 + (T)n Simple_repeat Simple_repeat 1 25 0 3 684 48 77 0 0 chr3L 13101184 13101288 -11442269 + AT_rich Low_complexity Low_complexity 1 104 0 3 684 27 29 0 0 chr3L 13102454 13102488 -11441069 + AT_rich Low_complexity Low_complexity 1 34 0 3 684 180 0 0 0 chr3L 13103983 13104003 -11439554 + (G)n Simple_repeat Simple_repeat 1 20 0 3 685 189 0 0 0 chr3L 13107246 13107267 -11436290 + (CCA)n Simple_repeat Simple_repeat 1 21 0 3 685 212 139 0 44 chr3L 13107573 13107618 -11435939 + A-rich Low_complexity Low_complexity 3 45 0 3 685 27 0 0 0 chr3L 13114455 13114482 -11429075 + AT_rich Low_complexity Low_complexity 1 27 0 3 685 22 0 0 0 chr3L 13114704 13114726 -11428831 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 21 0 0 0 chr3L 13114951 13114972 -11428585 + AT_rich Low_complexity Low_complexity 1 21 0 3 685 22 0 0 0 chr3L 13115338 13115360 -11428197 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 22 0 0 0 chr3L 13116668 13116690 -11426867 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 47 0 0 0 chr3L 13119382 13119429 -11424128 + AT_rich Low_complexity Low_complexity 1 47 0 3 685 25 51 0 0 chr3L 13120736 13120775 -11422782 + AT_rich Low_complexity Low_complexity 1 39 0 3 685 41 58 0 0 chr3L 13132048 13132117 -11411440 + AT_rich Low_complexity Low_complexity 1 69 0 3 685 30 45 0 0 chr3L 13134413 13134457 -11409100 + AT_rich Low_complexity Low_complexity 1 44 0 3 685 192 77 0 0 chr3L 13139685 13139711 -11403846 + (CAAAC)n Simple_repeat Simple_repeat 4 29 0 3 685 26 50 0 0 chr3L 13143354 13143394 -11400163 + AT_rich Low_complexity Low_complexity 1 40 0 3 685 25 0 0 0 chr3L 13143549 13143574 -11399983 + AT_rich Low_complexity Low_complexity 1 25 0 3 685 24 0 0 0 chr3L 13145954 13145978 -11397579 + AT_rich Low_complexity Low_complexity 1 24 0 3 685 23 0 0 0 chr3L 13150705 13150728 -11392829 + AT_rich Low_complexity Low_complexity 1 23 0 3 685 180 111 0 0 chr3L 13153651 13153678 -11389879 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 3 685 207 292 0 0 chr3L 13153838 13153886 -11389671 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 3 685 263 71 24 0 chr3L 13153945 13153987 -11389570 + (CATA)n Simple_repeat Simple_repeat 1 43 0 3 685 25 0 0 0 chr3L 13159258 13159283 -11384274 + AT_rich Low_complexity Low_complexity 1 25 0 3 685 25 0 0 0 chr3L 13160798 13160823 -11382734 + AT_rich Low_complexity Low_complexity 1 25 0 3 685 21 36 0 0 chr3L 13162225 13162253 -11381304 + AT_rich Low_complexity Low_complexity 1 28 0 3 685 26 30 0 0 chr3L 13163638 13163671 -11379886 + AT_rich Low_complexity Low_complexity 1 33 0 3 685 26 0 0 0 chr3L 13163826 13163852 -11379705 + AT_rich Low_complexity Low_complexity 1 26 0 3 685 244 259 17 0 chr3L 13164523 13164581 -11378976 + (TTCGGG)n Simple_repeat Simple_repeat 5 63 0 3 685 31 26 0 0 chr3L 13166321 13166359 -11377198 + AT_rich Low_complexity Low_complexity 1 38 0 3 685 22 0 0 0 chr3L 13169850 13169872 -11373685 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 192 182 0 0 chr3L 13171820 13171864 -11371693 + T-rich Low_complexity Low_complexity 1 44 0 3 685 22 56 0 0 chr3L 13172258 13172294 -11371263 + AT_rich Low_complexity Low_complexity 1 36 0 3 685 207 0 0 0 chr3L 13173292 13173315 -11370242 + (CAGCT)n Simple_repeat Simple_repeat 3 25 0 3 685 201 114 22 22 chr3L 13174551 13174596 -11368961 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 3 685 204 40 0 0 chr3L 13176872 13176897 -11366660 + (A)n Simple_repeat Simple_repeat 1 25 0 3 685 29 60 0 0 chr3L 13183574 13183624 -11359933 + AT_rich Low_complexity Low_complexity 1 50 0 3 685 21 0 0 0 chr3L 13184356 13184377 -11359180 + AT_rich Low_complexity Low_complexity 1 21 0 3 685 209 135 27 0 chr3L 13185731 13185768 -11357789 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 3 685 252 86 0 0 chr3L 13189509 13189544 -11354013 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 685 301 186 0 0 chr3L 13193742 13193801 -11349756 + DNAREP1_DM LINE Penelope 1 59 -535 3 685 24 0 0 0 chr3L 13194921 13194945 -11348612 + AT_rich Low_complexity Low_complexity 1 24 0 3 685 28 61 0 0 chr3L 13198767 13198816 -11344741 + AT_rich Low_complexity Low_complexity 1 49 0 3 685 189 107 0 0 chr3L 13200272 13200300 -11343257 + (CTG)n Simple_repeat Simple_repeat 3 30 0 3 685 192 77 0 0 chr3L 13200442 13200468 -11343089 + (CAG)n Simple_repeat Simple_repeat 3 28 0 3 685 219 114 0 0 chr3L 13201920 13201955 -11341602 + (CAT)n Simple_repeat Simple_repeat 1 35 0 3 685 246 81 0 0 chr3L 13202299 13202336 -11341221 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 685 21 36 0 0 chr3L 13202827 13202855 -11340702 + AT_rich Low_complexity Low_complexity 1 28 0 3 685 24 0 0 0 chr3L 13204559 13204583 -11338974 + AT_rich Low_complexity Low_complexity 1 24 0 3 685 21 36 0 0 chr3L 13206289 13206317 -11337240 + AT_rich Low_complexity Low_complexity 1 28 0 3 685 22 0 0 0 chr3L 13208923 13208945 -11334612 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 27 49 0 0 chr3L 13211273 13211314 -11332243 + AT_rich Low_complexity Low_complexity 1 41 0 3 685 26 30 0 0 chr3L 13215517 13215550 -11328007 + AT_rich Low_complexity Low_complexity 1 33 0 3 685 26 74 0 0 chr3L 13216626 13216680 -11326877 + AT_rich Low_complexity Low_complexity 1 54 0 3 685 218 119 0 45 chr3L 13216952 13216996 -11326561 + (TTACG)n Simple_repeat Simple_repeat 4 45 0 3 685 24 32 0 0 chr3L 13220206 13220237 -11323320 + AT_rich Low_complexity Low_complexity 1 31 0 3 685 22 0 0 0 chr3L 13222359 13222381 -11321176 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 236 297 11 0 chr3L 13224349 13224440 -11319117 + (CAT)n Simple_repeat Simple_repeat 1 92 0 3 685 201 74 0 0 chr3L 13224566 13224593 -11318964 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 685 180 0 0 0 chr3L 13227934 13227954 -11315603 + (A)n Simple_repeat Simple_repeat 1 20 0 3 685 21 36 0 0 chr3L 13228477 13228505 -11315052 + AT_rich Low_complexity Low_complexity 1 28 0 3 685 212 95 0 67 chr3L 13228768 13228813 -11314744 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 3 685 21 0 0 0 chr3L 13230015 13230036 -11313521 + AT_rich Low_complexity Low_complexity 1 21 0 3 685 210 71 0 0 chr3L 13230066 13230094 -11313463 + (CGA)n Simple_repeat Simple_repeat 2 29 0 3 685 312 70 0 0 chr3L 13230141 13230184 -11313373 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 685 30 59 0 0 chr3L 13230425 13230476 -11313081 + AT_rich Low_complexity Low_complexity 1 51 0 3 685 24 0 0 0 chr3L 13230846 13230870 -11312687 + AT_rich Low_complexity Low_complexity 1 24 0 3 685 189 0 0 0 chr3L 13233577 13233598 -11309959 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 3 685 183 100 0 0 chr3L 13236575 13236605 -11306952 + (CTG)n Simple_repeat Simple_repeat 3 32 0 3 686 183 42 0 0 chr3L 13246332 13246356 -11297201 + (CTATA)n Simple_repeat Simple_repeat 2 25 0 3 686 198 0 0 0 chr3L 13249627 13249649 -11293908 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 3 686 23 0 0 0 chr3L 13251458 13251481 -11292076 + AT_rich Low_complexity Low_complexity 1 23 0 3 686 226 250 0 0 chr3L 13253069 13253125 -11290432 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 686 26 0 0 0 chr3L 13254038 13254064 -11289493 + AT_rich Low_complexity Low_complexity 1 26 0 3 686 26 30 0 0 chr3L 13258006 13258039 -11285518 + AT_rich Low_complexity Low_complexity 1 33 0 3 686 292 190 24 12 chr3L 13260257 13260342 -11283215 - ROO_I LTR Pao -7523 733 648 3 686 25 31 0 0 chr3L 13260627 13260659 -11282898 + AT_rich Low_complexity Low_complexity 1 32 0 3 686 29 84 0 0 chr3L 13261875 13261946 -11281611 + AT_rich Low_complexity Low_complexity 1 71 0 3 686 35 24 0 0 chr3L 13277071 13277113 -11266444 + AT_rich Low_complexity Low_complexity 1 42 0 3 686 211 156 67 0 chr3L 13279832 13279877 -11263680 + (CAACT)n Simple_repeat Simple_repeat 4 51 0 3 686 22 0 0 0 chr3L 13281172 13281194 -11262363 + AT_rich Low_complexity Low_complexity 1 22 0 3 686 29 0 0 0 chr3L 13281241 13281270 -11262287 + AT_rich Low_complexity Low_complexity 1 29 0 3 686 280 222 0 0 chr3L 13285077 13285149 -11258408 - DNAREP1_DM LINE Penelope 0 594 523 3 686 1500 19 0 0 chr3L 13285179 13285453 -11258104 + (TAGA)n Simple_repeat Simple_repeat 1 274 0 3 686 42 36 0 0 chr3L 13285464 13285520 -11258037 + AT_rich Low_complexity Low_complexity 1 56 0 3 686 23 0 0 0 chr3L 13286154 13286177 -11257380 + AT_rich Low_complexity Low_complexity 1 23 0 3 686 23 0 0 0 chr3L 13286297 13286320 -11257237 + AT_rich Low_complexity Low_complexity 1 23 0 3 686 28 29 0 0 chr3L 13286860 13286895 -11256662 + AT_rich Low_complexity Low_complexity 1 35 0 3 686 40 59 0 0 chr3L 13288451 13288519 -11255038 + AT_rich Low_complexity Low_complexity 1 68 0 3 686 32 0 0 0 chr3L 13292272 13292304 -11251253 + AT_rich Low_complexity Low_complexity 1 32 0 3 686 24 0 0 0 chr3L 13292905 13292929 -11250628 + AT_rich Low_complexity Low_complexity 1 24 0 3 686 28 0 0 0 chr3L 13293040 13293068 -11250489 + AT_rich Low_complexity Low_complexity 1 28 0 3 686 27 0 0 0 chr3L 13293483 13293510 -11250047 + AT_rich Low_complexity Low_complexity 1 27 0 3 686 43 76 0 0 chr3L 13301318 13301410 -11242147 + AT_rich Low_complexity Low_complexity 1 92 0 3 686 35 54 0 0 chr3L 13301490 13301546 -11242011 + AT_rich Low_complexity Low_complexity 1 56 0 3 686 214 182 0 22 chr3L 13305376 13305421 -11238136 + (CAGC)n Simple_repeat Simple_repeat 1 44 0 3 686 24 85 0 0 chr3L 13311867 13311926 -11231631 + AT_rich Low_complexity Low_complexity 1 59 0 3 686 31 68 0 0 chr3L 13312522 13312581 -11230976 + AT_rich Low_complexity Low_complexity 1 59 0 3 686 22 0 0 0 chr3L 13315166 13315188 -11228369 + AT_rich Low_complexity Low_complexity 1 22 0 3 686 198 156 0 0 chr3L 13315206 13315251 -11228306 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 686 22 0 0 0 chr3L 13318329 13318351 -11225206 + AT_rich Low_complexity Low_complexity 1 22 0 3 686 180 97 0 0 chr3L 13321343 13321374 -11222183 + (A)n Simple_repeat Simple_repeat 1 31 0 3 686 30 0 0 0 chr3L 13324410 13324440 -11219117 + AT_rich Low_complexity Low_complexity 1 30 0 3 686 204 67 0 0 chr3L 13329190 13329220 -11214337 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 3 686 23 68 0 0 chr3L 13330280 13330324 -11213233 + AT_rich Low_complexity Low_complexity 1 44 0 3 686 831 48 0 0 chr3L 13331125 13331229 -11212328 + (TA)n Simple_repeat Simple_repeat 2 105 0 3 686 38 22 0 0 chr3L 13333664 13333709 -11209848 + AT_rich Low_complexity Low_complexity 1 45 0 3 686 25 0 0 0 chr3L 13335995 13336020 -11207537 + AT_rich Low_complexity Low_complexity 1 25 0 3 686 24 53 0 0 chr3L 13337081 13337119 -11206438 + AT_rich Low_complexity Low_complexity 1 38 0 3 686 24 85 0 0 chr3L 13338492 13338551 -11205006 + AT_rich Low_complexity Low_complexity 1 59 0 3 686 38 29 0 42 chr3L 13339098 13339169 -11204388 + AT_rich Low_complexity Low_complexity 1 68 0 3 686 246 81 0 0 chr3L 13339639 13339676 -11203881 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 686 182 33 67 0 chr3L 13341998 13342028 -11201529 + (CATTA)n Simple_repeat Simple_repeat 2 33 0 3 686 21 0 0 0 chr3L 13343217 13343238 -11200319 + AT_rich Low_complexity Low_complexity 1 21 0 3 686 21 57 0 0 chr3L 13344368 13344403 -11199154 + AT_rich Low_complexity Low_complexity 1 35 0 3 686 25 31 0 0 chr3L 13349046 13349078 -11194479 + AT_rich Low_complexity Low_complexity 1 32 0 3 686 27 29 0 0 chr3L 13349276 13349310 -11194247 + AT_rich Low_complexity Low_complexity 1 34 0 3 686 230 167 73 29 chr3L 13351565 13351633 -11191924 - DMRPR Unknown Unknown -79 206 136 3 686 204 200 0 0 chr3L 13353208 13353243 -11190314 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 686 26 0 0 0 chr3L 13353701 13353727 -11189830 + AT_rich Low_complexity Low_complexity 1 26 0 3 686 216 250 0 0 chr3L 13354742 13354786 -11188771 + (CGA)n Simple_repeat Simple_repeat 1 44 0 3 686 26 50 0 0 chr3L 13358164 13358204 -11185353 + AT_rich Low_complexity Low_complexity 1 40 0 3 686 23 33 0 0 chr3L 13359964 13359994 -11183563 + AT_rich Low_complexity Low_complexity 1 30 0 3 686 23 0 0 0 chr3L 13361035 13361058 -11182499 + AT_rich Low_complexity Low_complexity 1 23 0 3 686 21 0 0 0 chr3L 13361181 13361202 -11182355 + AT_rich Low_complexity Low_complexity 1 21 0 3 686 201 74 0 0 chr3L 13362293 13362320 -11181237 + (ATTG)n Simple_repeat Simple_repeat 4 30 0 3 686 21 36 0 0 chr3L 13365796 13365824 -11177733 + AT_rich Low_complexity Low_complexity 1 28 0 3 686 22 35 0 0 chr3L 13367248 13367277 -11176280 + AT_rich Low_complexity Low_complexity 1 29 0 3 686 209 132 26 0 chr3L 13368022 13368060 -11175497 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3 686 208 173 19 0 chr3L 13368310 13368362 -11175195 + (TTA)n Simple_repeat Simple_repeat 2 54 0 3 687 25 51 0 0 chr3L 13372901 13372940 -11170617 + AT_rich Low_complexity Low_complexity 1 39 0 3 687 283 287 0 0 chr3L 13374056 13374157 -11169400 + CT-rich Low_complexity Low_complexity 2 102 0 3 687 349 285 0 40 chr3L 13376608 13376758 -11166799 + GA-rich Low_complexity Low_complexity 1 144 0 3 687 36 82 0 0 chr3L 13381054 13381139 -11162418 + AT_rich Low_complexity Low_complexity 1 85 0 3 687 29 0 0 0 chr3L 13381301 13381330 -11162227 + AT_rich Low_complexity Low_complexity 1 29 0 3 687 22 70 0 0 chr3L 13383271 13383314 -11160243 + AT_rich Low_complexity Low_complexity 1 43 0 3 687 25 0 0 0 chr3L 13383328 13383353 -11160204 + AT_rich Low_complexity Low_complexity 1 25 0 3 687 276 53 0 0 chr3L 13384265 13384303 -11159254 + (CACTC)n Simple_repeat Simple_repeat 5 42 0 3 687 202 132 26 0 chr3L 13384965 13385003 -11158554 + (CAG)n Simple_repeat Simple_repeat 1 39 0 3 687 192 77 0 0 chr3L 13385047 13385073 -11158484 + (CTCTG)n Simple_repeat Simple_repeat 2 27 0 3 687 402 136 0 0 chr3L 13387114 13387195 -11156362 + (CAG)n Simple_repeat Simple_repeat 1 81 0 3 687 261 0 0 0 chr3L 13389829 13389858 -11153699 + (CAT)n Simple_repeat Simple_repeat 3 31 0 3 687 209 275 0 0 chr3L 13391330 13391399 -11152158 + T-rich Low_complexity Low_complexity 1 69 0 3 687 355 188 0 0 chr3L 13392582 13392667 -11150890 - ROO_I LTR Pao -7522 734 650 3 687 198 71 0 0 chr3L 13392755 13392783 -11150774 + (CTG)n Simple_repeat Simple_repeat 2 29 0 3 687 195 100 0 0 chr3L 13393229 13393259 -11150298 + (CTG)n Simple_repeat Simple_repeat 1 30 0 3 687 25 31 0 0 chr3L 13395027 13395059 -11148498 + AT_rich Low_complexity Low_complexity 1 32 0 3 687 26 82 0 0 chr3L 13395240 13395301 -11148256 + AT_rich Low_complexity Low_complexity 1 61 0 3 687 27 49 0 0 chr3L 13398280 13398321 -11145236 + AT_rich Low_complexity Low_complexity 1 41 0 3 687 183 139 0 0 chr3L 13398525 13398561 -11144996 + (CTTTG)n Simple_repeat Simple_repeat 1 36 0 3 687 32 0 0 0 chr3L 13404201 13404233 -11139324 + AT_rich Low_complexity Low_complexity 1 32 0 3 687 25 75 0 0 chr3L 13405652 13405705 -11137852 + AT_rich Low_complexity Low_complexity 1 53 0 3 687 21 0 0 0 chr3L 13406681 13406702 -11136855 + AT_rich Low_complexity Low_complexity 1 21 0 3 687 255 207 0 0 chr3L 13411949 13412007 -11131550 + G-rich Low_complexity Low_complexity 3 60 0 3 687 21 0 0 0 chr3L 13413790 13413811 -11129746 + AT_rich Low_complexity Low_complexity 1 21 0 3 687 189 0 0 0 chr3L 13414033 13414054 -11129503 + (CTG)n Simple_repeat Simple_repeat 3 23 0 3 687 247 143 92 35 chr3L 13415541 13415628 -11127929 - ROO_I LTR Pao -7498 758 667 3 687 201 39 0 0 chr3L 13415852 13415878 -11127679 + (CAT)n Simple_repeat Simple_repeat 1 26 0 3 687 25 51 0 0 chr3L 13417530 13417569 -11125988 + AT_rich Low_complexity Low_complexity 1 39 0 3 687 22 0 0 0 chr3L 13418993 13419015 -11124542 + AT_rich Low_complexity Low_complexity 1 22 0 3 687 23 68 0 0 chr3L 13420073 13420117 -11123440 + AT_rich Low_complexity Low_complexity 1 44 0 3 687 585 159 68 0 chr3L 13421449 13421581 -11121976 + DNAREP1_DM LINE Penelope 2 142 -452 3 687 559 173 104 15 chr3L 13421584 13421719 -11121838 + DNAREP1_DM LINE Penelope 445 591 -3 3 687 267 230 0 54 chr3L 13422322 13422414 -11121143 + (TATATG)n Simple_repeat Simple_repeat 5 91 0 3 687 319 185 0 61 chr3L 13423483 13423581 -11119976 - ROO_I LTR Pao -7527 729 638 3 687 31 26 0 0 chr3L 13427066 13427104 -11116453 + AT_rich Low_complexity Low_complexity 1 38 0 3 687 209 208 0 0 chr3L 13427637 13427685 -11115872 + (TCTG)n Simple_repeat Simple_repeat 3 50 0 3 687 204 97 0 0 chr3L 13428151 13428182 -11115375 + (CAATT)n Simple_repeat Simple_repeat 3 33 0 3 687 25 0 0 0 chr3L 13429193 13429218 -11114339 + AT_rich Low_complexity Low_complexity 1 25 0 3 687 32 26 0 0 chr3L 13430575 13430614 -11112943 + AT_rich Low_complexity Low_complexity 1 39 0 3 687 26 0 0 0 chr3L 13432347 13432373 -11111184 + AT_rich Low_complexity Low_complexity 1 26 0 3 687 33 43 0 0 chr3L 13433763 13433810 -11109747 + AT_rich Low_complexity Low_complexity 1 47 0 3 687 28 48 0 0 chr3L 13435576 13435618 -11107939 + AT_rich Low_complexity Low_complexity 1 42 0 3 687 21 0 0 0 chr3L 13435794 13435815 -11107742 + AT_rich Low_complexity Low_complexity 1 21 0 3 687 218 95 0 23 chr3L 13436282 13436325 -11107232 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 687 252 213 13 0 chr3L 13441167 13441242 -11102315 + ROO_I LTR Pao 669 744 -7512 3 687 25 83 0 0 chr3L 13443494 13443554 -11100003 + AT_rich Low_complexity Low_complexity 1 60 0 3 687 183 139 0 0 chr3L 13460638 13460674 -11082883 + (CTG)n Simple_repeat Simple_repeat 2 37 0 3 687 21 71 0 0 chr3L 13462602 13462644 -11080913 + AT_rich Low_complexity Low_complexity 1 42 0 3 687 23 68 0 0 chr3L 13469475 13469519 -11074038 + AT_rich Low_complexity Low_complexity 1 44 0 3 687 200 239 0 56 chr3L 13470502 13470573 -11072984 + GA-rich Low_complexity Low_complexity 1 67 0 3 687 24 32 0 0 chr3L 13470731 13470762 -11072795 + AT_rich Low_complexity Low_complexity 1 31 0 3 687 324 83 0 0 chr3L 13470937 13470985 -11072572 + (CAG)n Simple_repeat Simple_repeat 2 49 0 3 687 25 0 0 0 chr3L 13474093 13474118 -11069439 + AT_rich Low_complexity Low_complexity 1 25 0 3 687 236 185 0 0 chr3L 13474808 13474862 -11068695 + ROO_I LTR Pao 675 728 -7528 3 687 230 0 33 0 chr3L 13476157 13476187 -11067370 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 687 214 147 0 0 chr3L 13480172 13480206 -11063351 + (GCTG)n Simple_repeat Simple_repeat 3 36 0 3 687 213 39 0 0 chr3L 13481913 13481939 -11061618 + (CAGC)n Simple_repeat Simple_repeat 2 27 0 3 687 181 0 0 65 chr3L 13483057 13483088 -11060469 + (CAGC)n Simple_repeat Simple_repeat 1 29 0 3 687 208 241 0 0 chr3L 13483743 13483797 -11059760 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 3 687 214 214 0 54 chr3L 13485084 13485158 -11058399 + T-rich Low_complexity Low_complexity 1 70 0 3 687 195 69 0 0 chr3L 13485481 13485510 -11058047 + (CGAT)n Simple_repeat Simple_repeat 3 31 0 3 687 234 81 0 0 chr3L 13485645 13485682 -11057875 + (CACTC)n Simple_repeat Simple_repeat 3 39 0 3 687 298 272 23 31 chr3L 13485830 13485959 -11057598 + (CTG)n Simple_repeat Simple_repeat 2 129 0 3 687 258 56 0 0 chr3L 13486930 13486966 -11056591 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 687 195 42 0 0 chr3L 13487584 13487608 -11055949 + (A)n Simple_repeat Simple_repeat 1 24 0 3 687 203 255 0 0 chr3L 13488461 13488508 -11055049 + A-rich Low_complexity Low_complexity 1 47 0 3 687 204 250 0 0 chr3L 13492406 13492454 -11051103 + (TTG)n Simple_repeat Simple_repeat 1 48 0 3 687 186 43 0 0 chr3L 13493276 13493299 -11050258 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 687 215 156 0 86 chr3L 13495182 13495252 -11048305 + (CAACC)n Simple_repeat Simple_repeat 5 68 0 3 687 207 114 0 0 chr3L 13495439 13495474 -11048083 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 687 198 0 0 0 chr3L 13496216 13496238 -11047319 + (CAG)n Simple_repeat Simple_repeat 1 22 0 3 687 257 167 0 43 chr3L 13499042 13499111 -11044446 + (CAG)n Simple_repeat Simple_repeat 3 68 0 3 687 225 154 0 0 chr3L 13499366 13499405 -11044152 + (CAG)n Simple_repeat Simple_repeat 3 41 0 3 687 268 167 0 27 chr3L 13499781 13499855 -11043702 + (CAA)n Simple_repeat Simple_repeat 1 72 0 3 687 267 114 0 0 chr3L 13499925 13499969 -11043588 + (CAG)n Simple_repeat Simple_repeat 1 44 0 3 688 216 97 0 0 chr3L 13501118 13501149 -11042408 + (CAG)n Simple_repeat Simple_repeat 3 33 0 3 688 255 157 0 0 chr3L 13502591 13502642 -11040915 + (CAG)n Simple_repeat Simple_repeat 3 53 0 3 688 261 57 0 0 chr3L 13502718 13502753 -11040804 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 688 205 98 49 0 chr3L 13503275 13503316 -11040241 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 688 201 129 0 0 chr3L 13510134 13510165 -11033392 + (CTG)n Simple_repeat Simple_repeat 1 31 0 3 688 21 0 0 0 chr3L 13511800 13511821 -11031736 + AT_rich Low_complexity Low_complexity 1 21 0 3 688 21 0 0 0 chr3L 13513591 13513612 -11029945 + AT_rich Low_complexity Low_complexity 1 21 0 3 688 22 0 0 0 chr3L 13513796 13513818 -11029739 + AT_rich Low_complexity Low_complexity 1 22 0 3 688 272 253 4 39 chr3L 13515030 13515204 -11028353 + T-rich Low_complexity Low_complexity 1 167 0 3 688 31 0 0 0 chr3L 13515261 13515292 -11028265 + AT_rich Low_complexity Low_complexity 1 31 0 3 688 216 122 0 0 chr3L 13515420 13515461 -11028096 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 3 688 217 271 11 23 chr3L 13516861 13516948 -11026609 + T-rich Low_complexity Low_complexity 5 90 0 3 688 3975 5 0 0 chr3L 13518311 13518739 -11024818 + ROO_LTR LTR Pao 1 428 0 3 688 55149 1 2 0 chr3L 13518739 13524820 -11018737 + ROO_I LTR Pao 1 6096 -2160 3 688 7182 1 0 0 chr3L 13524819 13525621 -11017936 + ROO_I LTR Pao 7455 8256 0 3 688 3975 5 0 0 chr3L 13525621 13526049 -11017508 + ROO_LTR LTR Pao 1 428 0 3 688 201 94 0 0 chr3L 13527944 13527976 -11015581 + (TAA)n Simple_repeat Simple_repeat 3 34 0 3 688 258 222 14 0 chr3L 13528764 13528836 -11014721 + T-rich Low_complexity Low_complexity 1 73 0 3 688 23 68 0 0 chr3L 13529312 13529356 -11014201 + AT_rich Low_complexity Low_complexity 1 44 0 3 688 237 139 0 0 chr3L 13529646 13529689 -11013868 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 688 22 35 0 0 chr3L 13530024 13530053 -11013504 + AT_rich Low_complexity Low_complexity 1 29 0 3 688 291 85 0 0 chr3L 13530558 13530605 -11012952 + (T)n Simple_repeat Simple_repeat 1 47 0 3 688 41 21 0 0 chr3L 13530746 13530794 -11012763 + AT_rich Low_complexity Low_complexity 1 48 0 3 688 33 0 0 0 chr3L 13530920 13530953 -11012604 + AT_rich Low_complexity Low_complexity 1 33 0 3 688 233 228 0 0 chr3L 13530979 13531036 -11012521 + T-rich Low_complexity Low_complexity 1 57 0 3 688 248 236 0 0 chr3L 13531519 13531574 -11011983 + (TTG)n Simple_repeat Simple_repeat 1 55 0 3 688 245 250 0 15 chr3L 13532831 13532896 -11010661 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 688 233 208 0 0 chr3L 13533379 13533427 -11010130 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 688 215 189 0 36 chr3L 13535328 13535383 -11008174 + (GAGTG)n Simple_repeat Simple_repeat 2 54 0 3 688 238 214 0 18 chr3L 13535980 13536037 -11007520 + (TGGA)n Simple_repeat Simple_repeat 3 58 0 3 688 222 62 0 0 chr3L 13537873 13537905 -11005652 + (GGATG)n Simple_repeat Simple_repeat 5 36 0 3 688 249 167 0 0 chr3L 13542121 13542175 -11001382 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 688 227 211 0 19 chr3L 13544014 13544067 -10999490 + (CGA)n Simple_repeat Simple_repeat 3 54 0 3 688 186 103 0 0 chr3L 13544228 13544257 -10999300 + (CGGT)n Simple_repeat Simple_repeat 1 29 0 3 688 21 0 0 0 chr3L 13546372 13546393 -10997164 + AT_rich Low_complexity Low_complexity 1 21 0 3 688 243 0 0 0 chr3L 13548145 13548172 -10995385 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 688 28 0 0 0 chr3L 13548652 13548680 -10994877 + AT_rich Low_complexity Low_complexity 1 28 0 3 688 23 33 0 0 chr3L 13548800 13548830 -10994727 + AT_rich Low_complexity Low_complexity 1 30 0 3 688 303 191 0 0 chr3L 13549221 13549289 -10994268 + (AGTTG)n Simple_repeat Simple_repeat 3 70 0 3 688 215 241 0 0 chr3L 13550151 13550205 -10993352 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 688 26 30 0 0 chr3L 13551226 13551259 -10992298 + AT_rich Low_complexity Low_complexity 1 33 0 3 688 30 0 0 0 chr3L 13551575 13551605 -10991952 + AT_rich Low_complexity Low_complexity 1 30 0 3 688 219 69 0 0 chr3L 13556386 13556415 -10987142 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 688 213 233 0 0 chr3L 13556415 13556458 -10987099 + GA-rich Low_complexity Low_complexity 2 44 0 3 688 201 74 0 0 chr3L 13556779 13556806 -10986751 + (AGCTG)n Simple_repeat Simple_repeat 1 27 0 3 688 312 70 0 0 chr3L 13558847 13558890 -10984667 + (GCTG)n Simple_repeat Simple_repeat 4 46 0 3 688 203 179 0 0 chr3L 13558953 13558992 -10984565 + A-rich Low_complexity Low_complexity 1 39 0 3 688 26 0 0 0 chr3L 13560838 13560864 -10982693 + AT_rich Low_complexity Low_complexity 1 26 0 3 688 21 36 0 0 chr3L 13561120 13561148 -10982409 + AT_rich Low_complexity Low_complexity 1 28 0 3 688 195 42 0 0 chr3L 13561321 13561345 -10982212 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 688 219 36 0 0 chr3L 13563871 13563899 -10979658 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 688 231 61 0 0 chr3L 13564911 13564944 -10978613 + (CGAAA)n Simple_repeat Simple_repeat 2 34 0 3 688 47714 6 0 0 chr3L 13567953 13573174 -10970383 + DMRT1B LINE R1 1 5183 0 3 688 414 0 0 0 chr3L 13573174 13573220 -10970337 + (A)n Simple_repeat Simple_repeat 1 46 0 3 688 231 36 0 0 chr3L 13576727 13576755 -10966802 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 688 24 32 0 0 chr3L 13576964 13576995 -10966562 + AT_rich Low_complexity Low_complexity 1 31 0 3 688 21 0 0 0 chr3L 13578343 13578364 -10965193 + AT_rich Low_complexity Low_complexity 1 21 0 3 688 216 0 0 0 chr3L 13580661 13580685 -10962872 + (A)n Simple_repeat Simple_repeat 1 24 0 3 688 237 274 20 0 chr3L 13580744 13580846 -10962711 + (CAG)n Simple_repeat Simple_repeat 2 105 0 3 688 189 0 0 0 chr3L 13584640 13584661 -10958896 + (CAGAC)n Simple_repeat Simple_repeat 5 25 0 3 688 203 260 0 0 chr3L 13584934 13584984 -10958573 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 3 688 228 67 0 0 chr3L 13585735 13585765 -10957792 + (CTG)n Simple_repeat Simple_repeat 3 32 0 3 688 201 121 0 0 chr3L 13586655 13586688 -10956869 + (ATG)n Simple_repeat Simple_repeat 2 34 0 3 688 22 0 0 0 chr3L 13587679 13587701 -10955856 + AT_rich Low_complexity Low_complexity 1 22 0 3 688 285 100 0 0 chr3L 13588036 13588086 -10955471 + (CAG)n Simple_repeat Simple_repeat 3 52 0 3 688 303 93 0 0 chr3L 13588921 13588964 -10954593 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 688 232 235 0 0 chr3L 13594354 13594405 -10949152 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 688 183 42 0 0 chr3L 13594544 13594568 -10948989 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 688 223 214 18 0 chr3L 13596540 13596596 -10946961 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 688 21 36 0 0 chr3L 13598860 13598888 -10944669 + AT_rich Low_complexity Low_complexity 1 28 0 3 688 25 65 0 0 chr3L 13600991 13601037 -10942520 + AT_rich Low_complexity Low_complexity 1 46 0 3 688 21 0 0 0 chr3L 13603226 13603247 -10940310 + AT_rich Low_complexity Low_complexity 1 21 0 3 688 189 74 0 0 chr3L 13603348 13603375 -10940182 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 688 207 268 0 0 chr3L 13606985 13607026 -10936531 + (TGGG)n Simple_repeat Simple_repeat 2 42 0 3 688 243 0 0 0 chr3L 13607283 13607310 -10936247 + (TC)n Simple_repeat Simple_repeat 1 27 0 3 688 21 0 0 0 chr3L 13608073 13608094 -10935463 + AT_rich Low_complexity Low_complexity 1 21 0 3 688 22 0 0 0 chr3L 13610058 13610080 -10933477 + AT_rich Low_complexity Low_complexity 1 22 0 3 688 208 171 24 0 chr3L 13612116 13612157 -10931400 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 688 22 35 0 0 chr3L 13612866 13612895 -10930662 + AT_rich Low_complexity Low_complexity 1 29 0 3 688 189 196 0 0 chr3L 13614854 13614905 -10928652 + (CCGAA)n Simple_repeat Simple_repeat 4 54 0 3 688 203 190 0 23 chr3L 13615154 13615197 -10928360 + GA-rich Low_complexity Low_complexity 4 45 0 3 688 228 35 0 0 chr3L 13616434 13616463 -10927094 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 688 240 35 0 0 chr3L 13618023 13618052 -10925505 + (CAAAC)n Simple_repeat Simple_repeat 1 29 0 3 688 211 329 0 14 chr3L 13618933 13619004 -10924553 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 688 336 24 0 0 chr3L 13619135 13619176 -10924381 + (CTG)n Simple_repeat Simple_repeat 3 43 0 3 688 186 43 0 0 chr3L 13619620 13619643 -10923914 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 688 204 40 0 0 chr3L 13619936 13619961 -10923596 + (CGAAA)n Simple_repeat Simple_repeat 1 25 0 3 688 543 56 0 0 chr3L 13622666 13622737 -10920820 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 688 273 128 0 0 chr3L 13623107 13623154 -10920403 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 3 688 203 194 0 0 chr3L 13624556 13624592 -10918965 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 688 198 174 0 0 chr3L 13627797 13627843 -10915714 + GA-rich Low_complexity Low_complexity 1 46 0 3 688 180 0 0 0 chr3L 13628405 13628425 -10915132 + (TTA)n Simple_repeat Simple_repeat 1 20 0 3 688 243 61 0 0 chr3L 13629229 13629262 -10914295 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 688 216 67 0 0 chr3L 13629298 13629328 -10914229 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 688 252 0 0 0 chr3L 13631262 13631290 -10912267 + (T)n Simple_repeat Simple_repeat 1 28 0 3 689 279 0 0 0 chr3L 13635146 13635177 -10908380 + (CTG)n Simple_repeat Simple_repeat 2 32 0 3 689 207 286 0 16 chr3L 13637751 13637815 -10905742 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 3 689 21 36 0 0 chr3L 13638910 13638938 -10904619 + AT_rich Low_complexity Low_complexity 1 28 0 3 689 211 268 0 18 chr3L 13639300 13639357 -10904200 + (CACG)n Simple_repeat Simple_repeat 1 56 0 3 689 22 0 0 0 chr3L 13640764 13640786 -10902771 + AT_rich Low_complexity Low_complexity 1 22 0 3 689 300 120 0 0 chr3L 13641036 13641086 -10902471 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 3 689 201 182 0 0 chr3L 13643305 13643360 -10900197 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 689 21 0 0 0 chr3L 13643390 13643411 -10900146 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 186 207 0 0 chr3L 13645198 13645256 -10898301 + (GGATG)n Simple_repeat Simple_repeat 5 62 0 3 689 206 241 0 0 chr3L 13646612 13646666 -10896891 + A-rich Low_complexity Low_complexity 1 54 0 3 689 192 40 0 0 chr3L 13649051 13649076 -10894481 + (TCTCTG)n Simple_repeat Simple_repeat 3 27 0 3 689 186 103 0 0 chr3L 13653552 13653581 -10889976 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 689 205 186 0 23 chr3L 13654827 13654871 -10888686 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 689 198 171 0 0 chr3L 13657930 13657971 -10885586 + CT-rich Low_complexity Low_complexity 4 44 0 3 689 212 175 0 0 chr3L 13659187 13659227 -10884330 + A-rich Low_complexity Low_complexity 1 40 0 3 689 337 51 51 0 chr3L 13659659 13659718 -10883839 + (GTTTG)n Simple_repeat Simple_repeat 2 63 0 3 689 211 125 25 0 chr3L 13661222 13661262 -10882295 + (CAA)n Simple_repeat Simple_repeat 1 41 0 3 689 221 150 0 0 chr3L 13664217 13664257 -10879300 + (CAG)n Simple_repeat Simple_repeat 1 40 0 3 689 228 149 0 0 chr3L 13664354 13664401 -10879156 + (CAATC)n Simple_repeat Simple_repeat 5 51 0 3 689 228 263 0 0 chr3L 13667107 13667164 -10876393 + A-rich Low_complexity Low_complexity 1 57 0 3 689 225 0 0 0 chr3L 13668822 13668847 -10874710 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 689 207 69 0 0 chr3L 13669988 13670017 -10873540 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 689 216 0 0 0 chr3L 13675293 13675317 -10868240 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 689 202 254 16 16 chr3L 13682759 13682823 -10860734 + (CAA)n Simple_repeat Simple_repeat 1 64 0 3 689 211 196 54 0 chr3L 13683716 13683772 -10859785 + (CCCGAA)n Simple_repeat Simple_repeat 1 59 0 3 689 47 0 0 0 chr3L 13687218 13687265 -10856292 + AT_rich Low_complexity Low_complexity 1 47 0 3 689 21 0 0 0 chr3L 13688395 13688416 -10855141 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 37 0 0 0 chr3L 13693466 13693503 -10850054 + AT_rich Low_complexity Low_complexity 1 37 0 3 689 240 111 0 0 chr3L 13693539 13693575 -10849982 + (CAG)n Simple_repeat Simple_repeat 3 38 0 3 689 189 0 0 0 chr3L 13696216 13696237 -10847320 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 689 22 0 0 0 chr3L 13697623 13697645 -10845912 + AT_rich Low_complexity Low_complexity 1 22 0 3 689 29 0 0 0 chr3L 13699499 13699528 -10844029 + AT_rich Low_complexity Low_complexity 1 29 0 3 689 276 149 0 0 chr3L 13700654 13700701 -10842856 + (TATG)n Simple_repeat Simple_repeat 2 48 0 3 689 22 35 0 0 chr3L 13700936 13700965 -10842592 + AT_rich Low_complexity Low_complexity 1 29 0 3 689 186 43 0 0 chr3L 13700978 13701001 -10842556 + (CTG)n Simple_repeat Simple_repeat 1 23 0 3 689 31 58 0 0 chr3L 13702652 13702704 -10840853 + AT_rich Low_complexity Low_complexity 1 52 0 3 689 213 211 0 0 chr3L 13703690 13703747 -10839810 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 689 21 0 0 0 chr3L 13704434 13704455 -10839102 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 237 241 0 0 chr3L 13704585 13704639 -10838918 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 689 29 47 0 0 chr3L 13704989 13705032 -10838525 + AT_rich Low_complexity Low_complexity 1 43 0 3 689 23 0 0 0 chr3L 13705519 13705542 -10838015 + AT_rich Low_complexity Low_complexity 1 23 0 3 689 21 0 0 0 chr3L 13705698 13705719 -10837838 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 195 69 0 0 chr3L 13710512 13710541 -10833016 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 689 33 43 0 0 chr3L 13716740 13716787 -10826770 + AT_rich Low_complexity Low_complexity 1 47 0 3 689 28 0 0 0 chr3L 13716817 13716845 -10826712 + AT_rich Low_complexity Low_complexity 1 28 0 3 689 204 163 0 0 chr3L 13720655 13720698 -10822859 + (CAGC)n Simple_repeat Simple_repeat 1 43 0 3 689 30 83 0 0 chr3L 13725231 13725303 -10818254 + AT_rich Low_complexity Low_complexity 1 72 0 3 689 21 0 0 0 chr3L 13725912 13725933 -10817624 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 208 239 0 0 chr3L 13730061 13730107 -10813450 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 689 288 70 0 0 chr3L 13730599 13730642 -10812915 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 689 26 0 0 0 chr3L 13736393 13736419 -10807138 + AT_rich Low_complexity Low_complexity 1 26 0 3 689 21 0 0 0 chr3L 13736932 13736953 -10806604 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 21 57 0 0 chr3L 13738696 13738731 -10804826 + AT_rich Low_complexity Low_complexity 1 35 0 3 689 202 246 15 15 chr3L 13745395 13745461 -10798096 + A-rich Low_complexity Low_complexity 2 67 0 3 689 23 86 0 0 chr3L 13747764 13747822 -10795735 + AT_rich Low_complexity Low_complexity 1 58 0 3 689 22 0 0 0 chr3L 13747980 13748002 -10795555 + AT_rich Low_complexity Low_complexity 1 22 0 3 689 225 65 0 0 chr3L 13752595 13752626 -10790931 + (CGAA)n Simple_repeat Simple_repeat 2 32 0 3 689 225 0 0 0 chr3L 13755879 13755904 -10787653 + (CAT)n Simple_repeat Simple_repeat 1 25 0 3 689 23 33 0 0 chr3L 13756931 13756961 -10786596 + AT_rich Low_complexity Low_complexity 1 30 0 3 689 215 274 0 0 chr3L 13757721 13757794 -10785763 + (CA)n Simple_repeat Simple_repeat 1 73 0 3 689 207 69 0 0 chr3L 13759659 13759688 -10783869 + (ACCG)n Simple_repeat Simple_repeat 2 30 0 3 689 21 36 0 0 chr3L 13761079 13761107 -10782450 + AT_rich Low_complexity Low_complexity 1 28 0 3 689 22 0 0 0 chr3L 13761974 13761996 -10781561 + AT_rich Low_complexity Low_complexity 1 22 0 3 690 23 78 0 0 chr3L 13769617 13769668 -10773889 + AT_rich Low_complexity Low_complexity 1 51 0 3 690 212 178 22 0 chr3L 13771678 13771723 -10771834 + (CAA)n Simple_repeat Simple_repeat 2 47 0 3 690 31 0 0 0 chr3L 13771929 13771960 -10771597 + AT_rich Low_complexity Low_complexity 1 31 0 3 690 23 68 0 0 chr3L 13772047 13772091 -10771466 + AT_rich Low_complexity Low_complexity 1 44 0 3 690 22 35 0 0 chr3L 13773019 13773048 -10770509 + AT_rich Low_complexity Low_complexity 1 29 0 3 690 203 244 0 0 chr3L 13773641 13773686 -10769871 + (TTCGG)n Simple_repeat Simple_repeat 1 45 0 3 690 207 0 0 0 chr3L 13776857 13776880 -10766677 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 690 36 40 0 0 chr3L 13780279 13780329 -10763228 + AT_rich Low_complexity Low_complexity 1 50 0 3 690 23 0 0 0 chr3L 13786597 13786620 -10756937 + AT_rich Low_complexity Low_complexity 1 23 0 3 690 215 61 0 29 chr3L 13786840 13786874 -10756683 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 690 26 64 0 0 chr3L 13789522 13789569 -10753988 + AT_rich Low_complexity Low_complexity 1 47 0 3 690 24 32 0 0 chr3L 13791061 13791092 -10752465 + AT_rich Low_complexity Low_complexity 1 31 0 3 690 33 56 0 0 chr3L 13791259 13791313 -10752244 + AT_rich Low_complexity Low_complexity 1 54 0 3 690 23 0 0 0 chr3L 13791451 13791474 -10752083 + AT_rich Low_complexity Low_complexity 1 23 0 3 690 25 31 0 0 chr3L 13793399 13793431 -10750126 + AT_rich Low_complexity Low_complexity 1 32 0 3 690 25 51 0 0 chr3L 13793459 13793498 -10750059 + AT_rich Low_complexity Low_complexity 1 39 0 3 690 276 154 0 0 chr3L 13793940 13793992 -10749565 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 690 200 122 0 24 chr3L 13795332 13795374 -10748183 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 690 183 204 0 0 chr3L 13796372 13796416 -10747141 + (CGA)n Simple_repeat Simple_repeat 2 45 0 3 690 200 140 23 23 chr3L 13797052 13797096 -10746461 + (TGGG)n Simple_repeat Simple_repeat 2 45 0 3 690 3861 5 0 2 chr3L 13797700 13798129 -10745428 + ROO_LTR LTR Pao 1 428 0 3 690 55176 1 1 0 chr3L 13798129 13804334 -10739223 + ROO_I LTR Pao 1 6214 -2042 3 690 3907 2 0 0 chr3L 13804334 13804762 -10738795 - ROO_LTR LTR Pao 0 428 1 3 690 73354 0 0 1 chr3L 13804762 13813023 -10730534 - ROO_I LTR Pao 0 8256 1 3 690 3885 2 0 2 chr3L 13813023 13813452 -10730105 - ROO_LTR LTR Pao 0 428 1 3 690 18140 1 1 0 chr3L 13813452 13815498 -10728059 + ROO_I LTR Pao 6210 8256 0 3 690 3831 5 0 5 chr3L 13815498 13815928 -10727629 + ROO_LTR LTR Pao 1 428 0 3 690 192 40 0 0 chr3L 13817447 13817472 -10726085 + (TC)n Simple_repeat Simple_repeat 1 25 0 3 690 192 40 0 0 chr3L 13819553 13819578 -10723979 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 690 252 200 0 0 chr3L 13820062 13820142 -10723415 + (TGG)n Simple_repeat Simple_repeat 2 81 0 3 690 22 0 0 0 chr3L 13821774 13821796 -10721761 + AT_rich Low_complexity Low_complexity 1 22 0 3 690 228 35 0 0 chr3L 13822494 13822523 -10721034 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 690 444 125 44 33 chr3L 13823729 13823820 -10719737 - Transib-N1_DM DNA Transib -402 112 21 3 690 189 100 19 39 chr3L 13824301 13824353 -10719204 + (TTATA)n Simple_repeat Simple_repeat 4 54 0 3 690 683 228 97 35 chr3L 13825042 13825269 -10718288 - DNAREP1_DM LINE Penelope -8 586 346 3 690 30 27 0 0 chr3L 13827922 13827959 -10715598 + AT_rich Low_complexity Low_complexity 1 37 0 3 690 39 74 0 0 chr3L 13831173 13831254 -10712303 + AT_rich Low_complexity Low_complexity 1 81 0 3 690 30 0 0 0 chr3L 13832014 13832044 -10711513 + AT_rich Low_complexity Low_complexity 1 30 0 3 690 24 53 0 0 chr3L 13838277 13838315 -10705242 + AT_rich Low_complexity Low_complexity 1 38 0 3 690 26 0 0 0 chr3L 13841137 13841163 -10702394 + AT_rich Low_complexity Low_complexity 1 26 0 3 690 22 0 0 0 chr3L 13842119 13842141 -10701416 + AT_rich Low_complexity Low_complexity 1 22 0 3 690 29 0 0 0 chr3L 13853084 13853113 -10690444 + AT_rich Low_complexity Low_complexity 1 29 0 3 690 31 44 0 0 chr3L 13855270 13855315 -10688242 + AT_rich Low_complexity Low_complexity 1 45 0 3 690 226 188 42 0 chr3L 13857802 13857850 -10685707 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 3 690 22 70 0 0 chr3L 13859789 13859832 -10683725 + AT_rich Low_complexity Low_complexity 1 43 0 3 690 180 125 0 0 chr3L 13860526 13860558 -10682999 + (T)n Simple_repeat Simple_repeat 1 32 0 3 690 30 0 0 0 chr3L 13860624 13860654 -10682903 + AT_rich Low_complexity Low_complexity 1 30 0 3 690 22 99 0 0 chr3L 13860744 13860815 -10682742 + AT_rich Low_complexity Low_complexity 1 71 0 3 690 222 91 0 0 chr3L 13862336 13862369 -10681188 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 3 690 209 265 29 0 chr3L 13862822 13862890 -10680667 + (ATTG)n Simple_repeat Simple_repeat 4 73 0 3 690 24 53 0 0 chr3L 13863752 13863790 -10679767 + AT_rich Low_complexity Low_complexity 1 38 0 3 690 185 211 0 17 chr3L 13863884 13863942 -10679615 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 690 189 250 0 0 chr3L 13865115 13865207 -10678350 + (ATGGTG)n Simple_repeat Simple_repeat 4 95 0 3 690 264 261 0 0 chr3L 13865286 13865351 -10678206 + (CTG)n Simple_repeat Simple_repeat 1 65 0 3 690 294 260 8 31 chr3L 13865464 13865591 -10677966 + (TTG)n Simple_repeat Simple_repeat 1 124 0 3 690 327 104 0 0 chr3L 13867635 13867683 -10675874 + (AACTG)n Simple_repeat Simple_repeat 5 52 0 3 690 240 291 14 36 chr3L 13868739 13868878 -10674679 + T-rich Low_complexity Low_complexity 3 138 0 3 690 219 140 0 0 chr3L 13869190 13869240 -10674317 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 690 240 219 15 15 chr3L 13870590 13870655 -10672902 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 690 28 0 0 0 chr3L 13871570 13871598 -10671959 + AT_rich Low_complexity Low_complexity 1 28 0 3 690 260 150 0 59 chr3L 13871965 13872050 -10671507 + ROO_I LTR Pao 652 731 -7525 3 690 208 217 0 0 chr3L 13874841 13874887 -10668670 + (CAGC)n Simple_repeat Simple_repeat 4 49 0 3 690 24 0 0 0 chr3L 13876288 13876312 -10667245 + AT_rich Low_complexity Low_complexity 1 24 0 3 690 180 111 0 0 chr3L 13877268 13877295 -10666262 + (TTG)n Simple_repeat Simple_repeat 3 29 0 3 690 335 83 0 16 chr3L 13877508 13877569 -10665988 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 690 195 100 0 0 chr3L 13877907 13877937 -10665620 + (CGGAA)n Simple_repeat Simple_repeat 3 32 0 3 690 224 229 0 41 chr3L 13878056 13878129 -10665428 + GA-rich Low_complexity Low_complexity 2 71 0 3 690 22 0 0 0 chr3L 13880204 13880226 -10663331 + AT_rich Low_complexity Low_complexity 1 22 0 3 690 207 100 0 0 chr3L 13880380 13880410 -10663147 + (CCG)n Simple_repeat Simple_repeat 2 31 0 3 690 182 37 37 0 chr3L 13880644 13880671 -10662886 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 690 294 106 0 0 chr3L 13881637 13881684 -10661873 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 690 21 0 0 0 chr3L 13882293 13882314 -10661243 + AT_rich Low_complexity Low_complexity 1 21 0 3 690 25 31 0 0 chr3L 13882459 13882491 -10661066 + AT_rich Low_complexity Low_complexity 1 32 0 3 690 228 188 0 0 chr3L 13883041 13883105 -10660452 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 690 21 57 0 0 chr3L 13884271 13884306 -10659251 + AT_rich Low_complexity Low_complexity 1 35 0 3 690 23 33 0 0 chr3L 13886234 13886264 -10657293 + AT_rich Low_complexity Low_complexity 1 30 0 3 690 195 100 0 0 chr3L 13886736 13886766 -10656791 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 690 299 140 0 0 chr3L 13889488 13889538 -10654019 + DNAREP1_DM LINE Penelope 1 50 -544 3 690 284 224 30 114 chr3L 13889547 13889678 -10653879 + DNAREP1_DM LINE Penelope 367 486 -108 3 690 21 0 0 0 chr3L 13890066 13890087 -10653470 + AT_rich Low_complexity Low_complexity 1 21 0 3 690 25 51 0 0 chr3L 13890631 13890670 -10652887 + AT_rich Low_complexity Low_complexity 1 39 0 3 690 26 0 0 0 chr3L 13890786 13890812 -10652745 + AT_rich Low_complexity Low_complexity 1 26 0 3 691 25 0 0 0 chr3L 13895151 13895176 -10648381 + AT_rich Low_complexity Low_complexity 1 25 0 3 691 21 0 0 0 chr3L 13895358 13895379 -10648178 + AT_rich Low_complexity Low_complexity 1 21 0 3 691 23 54 0 0 chr3L 13896513 13896550 -10647007 + AT_rich Low_complexity Low_complexity 1 37 0 3 691 27 0 0 0 chr3L 13896622 13896649 -10646908 + AT_rich Low_complexity Low_complexity 1 27 0 3 691 201 39 0 0 chr3L 13897680 13897706 -10645851 + (TC)n Simple_repeat Simple_repeat 2 27 0 3 691 28 79 0 0 chr3L 13898081 13898144 -10645413 + AT_rich Low_complexity Low_complexity 1 63 0 3 691 29 47 0 0 chr3L 13898795 13898838 -10644719 + AT_rich Low_complexity Low_complexity 1 43 0 3 691 26 74 0 0 chr3L 13903320 13903374 -10640183 + AT_rich Low_complexity Low_complexity 1 54 0 3 691 24 53 0 0 chr3L 13904985 13905023 -10638534 + AT_rich Low_complexity Low_complexity 1 38 0 3 691 189 0 0 0 chr3L 13905229 13905250 -10638307 + (TCCA)n Simple_repeat Simple_repeat 2 22 0 3 691 208 250 19 0 chr3L 13905983 13906035 -10637522 + (CATA)n Simple_repeat Simple_repeat 4 56 0 3 691 22 35 0 0 chr3L 13906047 13906076 -10637481 + AT_rich Low_complexity Low_complexity 1 29 0 3 691 26 64 0 0 chr3L 13906928 13906975 -10636582 + AT_rich Low_complexity Low_complexity 1 47 0 3 691 249 33 0 0 chr3L 13907385 13907415 -10636142 + (CTG)n Simple_repeat Simple_repeat 1 30 0 3 691 277 205 0 49 chr3L 13907893 13907975 -10635582 + A-rich Low_complexity Low_complexity 1 78 0 3 691 26 64 0 0 chr3L 13908520 13908567 -10634990 + AT_rich Low_complexity Low_complexity 1 47 0 3 691 25 0 0 0 chr3L 13909395 13909420 -10634137 + AT_rich Low_complexity Low_complexity 1 25 0 3 691 224 209 0 0 chr3L 13909737 13909780 -10633777 + (TATG)n Simple_repeat Simple_repeat 1 43 0 3 691 260 113 38 0 chr3L 13910860 13910913 -10632644 + (ACTG)n Simple_repeat Simple_repeat 1 55 0 3 691 35 24 0 0 chr3L 13914531 13914573 -10628984 + AT_rich Low_complexity Low_complexity 1 42 0 3 691 21 0 0 0 chr3L 13917599 13917620 -10625937 + AT_rich Low_complexity Low_complexity 1 21 0 3 691 207 88 0 0 chr3L 13918502 13918536 -10625021 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 691 29 94 0 0 chr3L 13922154 13922239 -10621318 + AT_rich Low_complexity Low_complexity 1 85 0 3 691 21 0 0 0 chr3L 13924792 13924813 -10618744 + AT_rich Low_complexity Low_complexity 1 21 0 3 691 34 0 0 0 chr3L 13928611 13928645 -10614912 + AT_rich Low_complexity Low_complexity 1 34 0 3 691 24 32 0 0 chr3L 13928752 13928783 -10614774 + AT_rich Low_complexity Low_complexity 1 31 0 3 691 27 29 0 0 chr3L 13928840 13928874 -10614683 + AT_rich Low_complexity Low_complexity 1 34 0 3 691 206 81 26 26 chr3L 13932882 13932920 -10610637 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 3 691 244 276 0 0 chr3L 13934191 13934249 -10609308 + (CAG)n Simple_repeat Simple_repeat 2 59 0 3 691 204 40 0 0 chr3L 13935800 13935825 -10607732 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 691 25 0 0 0 chr3L 13938255 13938280 -10605277 + AT_rich Low_complexity Low_complexity 1 25 0 3 691 24 67 0 0 chr3L 13938665 13938710 -10604847 + AT_rich Low_complexity Low_complexity 1 45 0 3 691 207 0 0 0 chr3L 13939767 13939790 -10603767 + (TGGA)n Simple_repeat Simple_repeat 1 23 0 3 691 22 0 0 0 chr3L 13940698 13940720 -10602837 + AT_rich Low_complexity Low_complexity 1 22 0 3 691 273 119 0 0 chr3L 13942690 13942732 -10600825 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 691 22 0 0 0 chr3L 13945974 13945996 -10597561 + AT_rich Low_complexity Low_complexity 1 22 0 3 691 198 43 62 42 chr3L 13948682 13948730 -10594827 + (TTAAA)n Simple_repeat Simple_repeat 3 51 0 3 691 254 106 0 21 chr3L 13950140 13950188 -10593369 + (TTTTG)n Simple_repeat Simple_repeat 4 50 0 3 691 26 0 0 0 chr3L 13950377 13950403 -10593154 + AT_rich Low_complexity Low_complexity 1 26 0 3 691 363 44 0 0 chr3L 13950739 13950784 -10592773 + (TGG)n Simple_repeat Simple_repeat 3 47 0 3 691 39 68 0 0 chr3L 13953516 13953590 -10589967 + AT_rich Low_complexity Low_complexity 1 74 0 3 691 27 0 0 0 chr3L 13955020 13955047 -10588510 + AT_rich Low_complexity Low_complexity 1 27 0 3 691 201 143 0 0 chr3L 13955512 13955547 -10588010 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 3 691 22 0 0 0 chr3L 13957114 13957136 -10586421 + AT_rich Low_complexity Low_complexity 1 22 0 3 691 27 0 0 0 chr3L 13958018 13958045 -10585512 + AT_rich Low_complexity Low_complexity 1 27 0 3 691 234 128 0 0 chr3L 13958523 13958562 -10584995 + (CTG)n Simple_repeat Simple_repeat 1 39 0 3 691 21 36 0 0 chr3L 13961712 13961740 -10581817 + AT_rich Low_complexity Low_complexity 1 28 0 3 691 180 77 0 0 chr3L 13966409 13966435 -10577122 + (TTG)n Simple_repeat Simple_repeat 3 28 0 3 691 21 57 0 0 chr3L 13968588 13968623 -10574934 + AT_rich Low_complexity Low_complexity 1 35 0 3 691 21 36 0 0 chr3L 13973111 13973139 -10570418 + AT_rich Low_complexity Low_complexity 1 28 0 3 691 249 139 0 0 chr3L 13973586 13973629 -10569928 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 691 222 91 0 0 chr3L 13974061 13974094 -10569463 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 691 333 62 0 0 chr3L 13975252 13975300 -10568257 + (CCA)n Simple_repeat Simple_repeat 1 48 0 3 691 201 238 0 0 chr3L 13975575 13975617 -10567940 + (CCA)n Simple_repeat Simple_repeat 2 43 0 3 691 22 0 0 0 chr3L 13976132 13976154 -10567403 + AT_rich Low_complexity Low_complexity 1 22 0 3 691 222 62 0 0 chr3L 13978899 13978931 -10564626 + (CTG)n Simple_repeat Simple_repeat 1 32 0 3 691 24 0 0 0 chr3L 13980242 13980266 -10563291 + AT_rich Low_complexity Low_complexity 1 24 0 3 691 30 59 0 0 chr3L 13982694 13982745 -10560812 + AT_rich Low_complexity Low_complexity 1 51 0 3 691 24 53 0 0 chr3L 13984250 13984288 -10559269 + AT_rich Low_complexity Low_complexity 1 38 0 3 691 217 172 77 15 chr3L 13985896 13985961 -10557596 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 3 691 25 31 0 0 chr3L 13986899 13986931 -10556626 + AT_rich Low_complexity Low_complexity 1 32 0 3 691 28 71 0 0 chr3L 13989913 13989969 -10553588 + AT_rich Low_complexity Low_complexity 1 56 0 3 691 24 0 0 0 chr3L 13990083 13990107 -10553450 + AT_rich Low_complexity Low_complexity 1 24 0 3 691 23 33 0 0 chr3L 13990176 13990206 -10553351 + AT_rich Low_complexity Low_complexity 1 30 0 3 691 180 0 0 0 chr3L 13990740 13990760 -10552797 + (GGA)n Simple_repeat Simple_repeat 2 21 0 3 691 25 0 0 0 chr3L 13992478 13992503 -10551054 + AT_rich Low_complexity Low_complexity 1 25 0 3 691 23 33 0 0 chr3L 13994923 13994953 -10548604 + AT_rich Low_complexity Low_complexity 1 30 0 3 691 21 57 0 0 chr3L 13996388 13996423 -10547134 + AT_rich Low_complexity Low_complexity 1 35 0 3 691 189 0 0 0 chr3L 13998436 13998457 -10545100 + (TTG)n Simple_repeat Simple_repeat 3 23 0 3 691 225 205 0 67 chr3L 14001783 14001872 -10541685 + ROO_I LTR Pao 641 723 -7533 3 691 215 211 0 0 chr3L 14005726 14005764 -10537793 + (CAG)n Simple_repeat Simple_repeat 3 40 0 3 691 200 243 14 54 chr3L 14006072 14006146 -10537411 + (CAG)n Simple_repeat Simple_repeat 3 73 0 3 691 216 67 0 0 chr3L 14006267 14006297 -10537260 + (CAG)n Simple_repeat Simple_repeat 3 32 0 3 691 278 338 12 6 chr3L 14006381 14006542 -10537015 + (CAG)n Simple_repeat Simple_repeat 2 163 0 3 691 251 284 0 33 chr3L 14008929 14009020 -10534537 + GA-rich Low_complexity Low_complexity 5 92 0 3 691 206 259 0 27 chr3L 14009612 14009723 -10533834 + GA-rich Low_complexity Low_complexity 4 111 0 3 691 180 179 0 0 chr3L 14016145 14016184 -10527373 + (CTG)n Simple_repeat Simple_repeat 3 41 0 3 691 210 233 0 0 chr3L 14016327 14016387 -10527170 + (TTG)n Simple_repeat Simple_repeat 1 60 0 3 691 226 135 61 98 chr3L 14017336 14017418 -10526139 - ROO_I LTR Pao -7523 733 655 3 691 264 259 0 0 chr3L 14017649 14017730 -10525827 - ROO_I LTR Pao -7533 723 643 3 691 244 177 0 112 chr3L 14017684 14017773 -10525784 - TART_B1 LINE telomeric -10461 193 115 3 691 416 150 0 29 chr3L 14017882 14017985 -10525572 - ROO_I LTR Pao -7511 745 646 3 691 282 253 11 11 chr3L 14018026 14018114 -10525443 + (CTG)n Simple_repeat Simple_repeat 3 90 0 3 691 250 234 0 72 chr3L 14018359 14018442 -10525115 - BS LINE Jockey -3003 2123 2047 3 691 226 232 110 0 chr3L 14018517 14018599 -10524958 - BS LINE Jockey -3017 2109 2019 3 691 213 299 0 0 chr3L 14018628 14018695 -10524862 + (CTG)n Simple_repeat Simple_repeat 3 69 0 3 691 235 168 0 112 chr3L 14018776 14018883 -10524674 - ROO_I LTR Pao -7518 738 644 3 691 236 209 9 37 chr3L 14019031 14019140 -10524417 + (CTG)n Simple_repeat Simple_repeat 2 107 0 3 691 296 289 9 9 chr3L 14019369 14019484 -10524073 + (CTG)n Simple_repeat Simple_repeat 3 117 0 3 691 249 226 0 81 chr3L 14019759 14019870 -10523687 - ROO_I LTR Pao -7514 742 641 3 691 364 181 0 0 chr3L 14020811 14020916 -10522641 - ROO_I LTR Pao -7513 743 639 3 691 180 200 0 0 chr3L 14021775 14021820 -10521737 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 691 30 0 0 0 chr3L 14023785 14023815 -10519742 + AT_rich Low_complexity Low_complexity 1 30 0 3 692 25 31 0 0 chr3L 14025076 14025108 -10518449 + AT_rich Low_complexity Low_complexity 1 32 0 3 692 24 32 0 0 chr3L 14029957 14029988 -10513569 + AT_rich Low_complexity Low_complexity 1 31 0 3 692 201 167 0 0 chr3L 14031487 14031523 -10512034 + GA-rich Low_complexity Low_complexity 2 37 0 3 692 200 111 28 0 chr3L 14034655 14034691 -10508866 + (CAAAAA)n Simple_repeat Simple_repeat 1 37 0 3 692 22 0 0 0 chr3L 14034957 14034979 -10508578 + AT_rich Low_complexity Low_complexity 1 22 0 3 692 25 65 0 0 chr3L 14038859 14038905 -10504652 + AT_rich Low_complexity Low_complexity 1 46 0 3 692 248 274 0 0 chr3L 14046551 14046635 -10496922 + (TG)n Simple_repeat Simple_repeat 1 84 0 3 692 225 152 0 0 chr3L 14046637 14046683 -10496874 + ROO_I LTR Pao 685 730 -7526 3 692 253 219 0 0 chr3L 14046766 14046830 -10496727 + A-rich Low_complexity Low_complexity 1 64 0 3 692 210 91 0 0 chr3L 14047085 14047118 -10496439 + (GGA)n Simple_repeat Simple_repeat 3 35 0 3 692 23 54 0 0 chr3L 14047541 14047578 -10495979 + AT_rich Low_complexity Low_complexity 1 37 0 3 692 22 0 0 0 chr3L 14047897 14047919 -10495638 + AT_rich Low_complexity Low_complexity 1 22 0 3 692 192 40 0 0 chr3L 14049108 14049133 -10494424 + (GGATG)n Simple_repeat Simple_repeat 5 29 0 3 692 216 0 0 0 chr3L 14049234 14049258 -10494299 + (CAGT)n Simple_repeat Simple_repeat 1 24 0 3 692 215 280 13 13 chr3L 14052641 14052717 -10490840 + (TA)n Simple_repeat Simple_repeat 1 76 0 3 692 23 54 0 0 chr3L 14053488 14053525 -10490032 + AT_rich Low_complexity Low_complexity 1 37 0 3 692 23 33 0 0 chr3L 14054816 14054846 -10488711 + AT_rich Low_complexity Low_complexity 1 30 0 3 692 231 190 0 0 chr3L 14055983 14056041 -10487516 + (TCCA)n Simple_repeat Simple_repeat 3 60 0 3 692 207 100 0 0 chr3L 14056159 14056189 -10487368 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 3 692 202 189 0 0 chr3L 14057281 14057318 -10486239 + (CCCGAA)n Simple_repeat Simple_repeat 3 39 0 3 692 203 169 16 33 chr3L 14057404 14057465 -10486092 + A-rich Low_complexity Low_complexity 4 63 0 3 692 22 0 0 0 chr3L 14058330 14058352 -10485205 + AT_rich Low_complexity Low_complexity 1 22 0 3 692 180 182 0 0 chr3L 14060110 14060154 -10483403 + (CCA)n Simple_repeat Simple_repeat 2 45 0 3 692 21 0 0 0 chr3L 14063762 14063783 -10479774 + AT_rich Low_complexity Low_complexity 1 21 0 3 692 26 82 0 0 chr3L 14064097 14064158 -10479399 + AT_rich Low_complexity Low_complexity 1 61 0 3 692 8529 0 0 0 chr3L 14064158 14065088 -10478469 - PLACW_DM DNA P 0 930 1 3 692 22 0 0 0 chr3L 14069253 14069275 -10474282 + AT_rich Low_complexity Low_complexity 1 22 0 3 692 251 187 40 0 chr3L 14070058 14070133 -10473424 + (TATCG)n Simple_repeat Simple_repeat 1 78 0 3 692 22 0 0 0 chr3L 14070247 14070269 -10473288 + GC_rich Low_complexity Low_complexity 1 22 0 3 692 24 32 0 0 chr3L 14071412 14071443 -10472114 + AT_rich Low_complexity Low_complexity 1 31 0 3 692 30 27 0 0 chr3L 14072265 14072302 -10471255 + AT_rich Low_complexity Low_complexity 1 37 0 3 692 26 0 0 0 chr3L 14076121 14076147 -10467410 + AT_rich Low_complexity Low_complexity 1 26 0 3 692 22 103 0 0 chr3L 14076976 14077054 -10466503 + AT_rich Low_complexity Low_complexity 1 78 0 3 692 213 216 0 0 chr3L 14081871 14081908 -10461649 + (TATG)n Simple_repeat Simple_repeat 1 37 0 3 692 28 29 0 0 chr3L 14082739 14082774 -10460783 + AT_rich Low_complexity Low_complexity 1 35 0 3 692 26 30 0 0 chr3L 14083748 14083781 -10459776 + AT_rich Low_complexity Low_complexity 1 33 0 3 692 21 57 0 0 chr3L 14084564 14084599 -10458958 + AT_rich Low_complexity Low_complexity 1 35 0 3 692 33 66 0 0 chr3L 14086722 14086783 -10456774 + AT_rich Low_complexity Low_complexity 1 61 0 3 692 180 0 0 0 chr3L 14087733 14087753 -10455804 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 692 217 200 0 0 chr3L 14089890 14089925 -10453632 + (TCG)n Simple_repeat Simple_repeat 2 36 0 3 692 21 0 0 0 chr3L 14091625 14091646 -10451911 + AT_rich Low_complexity Low_complexity 1 21 0 3 692 21 0 0 0 chr3L 14094018 14094039 -10449518 + AT_rich Low_complexity Low_complexity 1 21 0 3 692 210 71 0 0 chr3L 14094252 14094280 -10449277 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 3 692 28 0 0 0 chr3L 14095182 14095210 -10448347 + AT_rich Low_complexity Low_complexity 1 28 0 3 692 40 37 0 0 chr3L 14096927 14096981 -10446576 + AT_rich Low_complexity Low_complexity 1 54 0 3 692 204 97 0 0 chr3L 14097874 14097905 -10445652 + (CCA)n Simple_repeat Simple_repeat 2 32 0 3 692 21 0 0 0 chr3L 14098739 14098760 -10444797 + AT_rich Low_complexity Low_complexity 1 21 0 3 692 22 0 0 0 chr3L 14099454 14099476 -10444081 + AT_rich Low_complexity Low_complexity 1 22 0 3 692 216 0 0 0 chr3L 14101442 14101466 -10442091 + (GA)n Simple_repeat Simple_repeat 2 25 0 3 692 32 0 0 0 chr3L 14102764 14102796 -10440761 + AT_rich Low_complexity Low_complexity 1 32 0 3 692 180 0 0 0 chr3L 14103101 14103121 -10440436 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 692 28 29 0 0 chr3L 14105565 14105600 -10437957 + AT_rich Low_complexity Low_complexity 1 35 0 3 692 376 87 0 42 chr3L 14106441 14106513 -10437044 + (CTG)n Simple_repeat Simple_repeat 1 69 0 3 692 29 28 0 0 chr3L 14106739 14106775 -10436782 + AT_rich Low_complexity Low_complexity 1 36 0 3 692 25 0 0 0 chr3L 14111504 14111529 -10432028 + AT_rich Low_complexity Low_complexity 1 25 0 3 692 249 33 0 0 chr3L 14115128 14115158 -10428399 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 3 692 23 78 0 0 chr3L 14117334 14117385 -10426172 + AT_rich Low_complexity Low_complexity 1 51 0 3 692 288 311 12 6 chr3L 14118885 14119053 -10424504 + (CTG)n Simple_repeat Simple_repeat 3 171 0 3 692 25 31 0 0 chr3L 14120995 14121027 -10422530 + AT_rich Low_complexity Low_complexity 1 32 0 3 692 21 95 0 0 chr3L 14129941 14130004 -10413553 + AT_rich Low_complexity Low_complexity 1 63 0 3 692 189 0 0 0 chr3L 14130397 14130418 -10413139 + (ATG)n Simple_repeat Simple_repeat 3 23 0 3 692 21 0 0 0 chr3L 14132188 14132209 -10411348 + AT_rich Low_complexity Low_complexity 1 21 0 3 692 25 0 0 0 chr3L 14136217 14136242 -10407315 + AT_rich Low_complexity Low_complexity 1 25 0 3 692 24 32 0 0 chr3L 14136312 14136343 -10407214 + AT_rich Low_complexity Low_complexity 1 31 0 3 692 29 28 0 0 chr3L 14137201 14137237 -10406320 + AT_rich Low_complexity Low_complexity 1 36 0 3 692 205 184 0 0 chr3L 14137547 14137585 -10405972 + (TTG)n Simple_repeat Simple_repeat 1 38 0 3 692 24 0 0 0 chr3L 14141444 14141468 -10402089 + AT_rich Low_complexity Low_complexity 1 24 0 3 692 22 80 0 0 chr3L 14141605 14141655 -10401902 + AT_rich Low_complexity Low_complexity 1 50 0 3 692 246 271 0 0 chr3L 14143510 14143580 -10399977 + CT-rich Low_complexity Low_complexity 3 72 0 3 692 38 22 0 0 chr3L 14144046 14144091 -10399466 + AT_rich Low_complexity Low_complexity 1 45 0 3 692 186 43 0 0 chr3L 14145061 14145084 -10398473 + (CATTT)n Simple_repeat Simple_repeat 2 24 0 3 692 21 82 0 0 chr3L 14145964 14146013 -10397544 + AT_rich Low_complexity Low_complexity 1 49 0 3 692 23 78 0 0 chr3L 14147718 14147769 -10395788 + AT_rich Low_complexity Low_complexity 1 51 0 3 692 22 56 0 0 chr3L 14148883 14148919 -10394638 + AT_rich Low_complexity Low_complexity 1 36 0 3 692 33 94 0 0 chr3L 14150722 14150818 -10392739 + AT_rich Low_complexity Low_complexity 1 96 0 3 692 206 133 43 22 chr3L 14153748 14153794 -10389763 + (TAAG)n Simple_repeat Simple_repeat 1 47 0 3 693 395 177 266 0 chr3L 14156037 14156161 -10387396 + DNAREP1_DM LINE Penelope 363 519 -75 3 693 22 0 0 0 chr3L 14158199 14158221 -10385336 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 23 0 0 0 chr3L 14158983 14159006 -10384551 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 24 0 0 0 chr3L 14160391 14160415 -10383142 + AT_rich Low_complexity Low_complexity 1 24 0 3 693 27 0 0 0 chr3L 14161546 14161573 -10381984 + AT_rich Low_complexity Low_complexity 1 27 0 3 693 25 31 0 0 chr3L 14163147 14163179 -10380378 + AT_rich Low_complexity Low_complexity 1 32 0 3 693 234 125 0 0 chr3L 14165133 14165181 -10378376 + (ACTCG)n Simple_repeat Simple_repeat 3 50 0 3 693 22 0 0 0 chr3L 14172472 14172494 -10371063 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 22 0 0 0 chr3L 14178097 14178119 -10365438 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 212 227 0 0 chr3L 14179599 14179643 -10363914 + CT-rich Low_complexity Low_complexity 3 46 0 3 693 22 0 0 0 chr3L 14180314 14180336 -10363221 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 25 31 0 0 chr3L 14181734 14181766 -10361791 + AT_rich Low_complexity Low_complexity 1 32 0 3 693 22 80 0 0 chr3L 14182912 14182962 -10360595 + AT_rich Low_complexity Low_complexity 1 50 0 3 693 27 62 0 0 chr3L 14187187 14187235 -10356322 + AT_rich Low_complexity Low_complexity 1 48 0 3 693 182 37 37 0 chr3L 14191119 14191146 -10352411 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 3 693 27 0 0 0 chr3L 14191295 14191322 -10352235 + AT_rich Low_complexity Low_complexity 1 27 0 3 693 219 36 0 0 chr3L 14191672 14191700 -10351857 + (ATTTG)n Simple_repeat Simple_repeat 3 30 0 3 693 21 0 0 0 chr3L 14191958 14191979 -10351578 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 27 0 0 0 chr3L 14192053 14192080 -10351477 + AT_rich Low_complexity Low_complexity 1 27 0 3 693 28 48 0 0 chr3L 14194478 14194520 -10349037 + AT_rich Low_complexity Low_complexity 1 42 0 3 693 36 23 0 0 chr3L 14194868 14194911 -10348646 + AT_rich Low_complexity Low_complexity 1 43 0 3 693 23 33 0 0 chr3L 14194924 14194954 -10348603 + AT_rich Low_complexity Low_complexity 1 30 0 3 693 29 60 0 0 chr3L 14198059 14198109 -10345448 + AT_rich Low_complexity Low_complexity 1 50 0 3 693 28 29 0 0 chr3L 14198177 14198212 -10345345 + AT_rich Low_complexity Low_complexity 1 35 0 3 693 21 0 0 0 chr3L 14198257 14198278 -10345279 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 243 0 0 0 chr3L 14204116 14204143 -10339414 + (T)n Simple_repeat Simple_repeat 1 27 0 3 693 30 27 0 0 chr3L 14205772 14205809 -10337748 + AT_rich Low_complexity Low_complexity 1 37 0 3 693 25 51 0 0 chr3L 14206002 14206041 -10337516 + AT_rich Low_complexity Low_complexity 1 39 0 3 693 27 73 0 0 chr3L 14206110 14206165 -10337392 + AT_rich Low_complexity Low_complexity 1 55 0 3 693 24 0 0 0 chr3L 14206330 14206354 -10337203 + AT_rich Low_complexity Low_complexity 1 24 0 3 693 24 0 0 0 chr3L 14210507 14210531 -10333026 + AT_rich Low_complexity Low_complexity 1 24 0 3 693 258 32 0 0 chr3L 14217021 14217052 -10326505 + (TTG)n Simple_repeat Simple_repeat 1 31 0 3 693 204 194 0 100 chr3L 14218378 14218458 -10325099 + A-rich Low_complexity Low_complexity 3 74 0 3 693 245 104 0 59 chr3L 14218884 14218935 -10324622 + (CAA)n Simple_repeat Simple_repeat 1 48 0 3 693 23 0 0 0 chr3L 14220878 14220901 -10322656 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 216 0 0 0 chr3L 14221291 14221315 -10322242 + (CATATA)n Simple_repeat Simple_repeat 6 29 0 3 693 29 60 0 0 chr3L 14223435 14223485 -10320072 + AT_rich Low_complexity Low_complexity 1 50 0 3 693 30 0 0 0 chr3L 14227997 14228027 -10315530 + AT_rich Low_complexity Low_complexity 1 30 0 3 693 21 0 0 0 chr3L 14228664 14228685 -10314872 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 180 217 0 0 chr3L 14229350 14229396 -10314161 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 693 21 0 0 0 chr3L 14229436 14229457 -10314100 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 23 0 0 0 chr3L 14229931 14229954 -10313603 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 25 0 0 0 chr3L 14231121 14231146 -10312411 + AT_rich Low_complexity Low_complexity 1 25 0 3 693 22 0 0 0 chr3L 14232544 14232566 -10310991 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 21 0 0 0 chr3L 14235935 14235956 -10307601 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 27 62 0 0 chr3L 14237157 14237205 -10306352 + AT_rich Low_complexity Low_complexity 1 48 0 3 693 22 70 0 0 chr3L 14237241 14237284 -10306273 + AT_rich Low_complexity Low_complexity 1 43 0 3 693 36 53 0 0 chr3L 14237659 14237716 -10305841 + AT_rich Low_complexity Low_complexity 1 57 0 3 693 21 82 0 0 chr3L 14237735 14237784 -10305773 + AT_rich Low_complexity Low_complexity 1 49 0 3 693 30 45 0 0 chr3L 14238095 14238139 -10305418 + AT_rich Low_complexity Low_complexity 1 44 0 3 693 246 75 0 70 chr3L 14238715 14238758 -10304799 - PROTOP_A DNA P -556 549 510 3 693 22 35 0 0 chr3L 14239837 14239866 -10303691 + AT_rich Low_complexity Low_complexity 1 29 0 3 693 30 0 0 0 chr3L 14240046 14240076 -10303481 + AT_rich Low_complexity Low_complexity 1 30 0 3 693 24 32 0 0 chr3L 14240093 14240124 -10303433 + AT_rich Low_complexity Low_complexity 1 31 0 3 693 22 0 0 0 chr3L 14240281 14240303 -10303254 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 21 0 0 0 chr3L 14246985 14247006 -10296551 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 22 35 0 0 chr3L 14247365 14247394 -10296163 + AT_rich Low_complexity Low_complexity 1 29 0 3 693 24 32 0 0 chr3L 14248120 14248151 -10295406 + AT_rich Low_complexity Low_complexity 1 31 0 3 693 22 0 0 0 chr3L 14248330 14248352 -10295205 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 25 0 0 0 chr3L 14248365 14248390 -10295167 + AT_rich Low_complexity Low_complexity 1 25 0 3 693 27 29 0 0 chr3L 14250409 14250443 -10293114 + AT_rich Low_complexity Low_complexity 1 34 0 3 693 227 217 0 0 chr3L 14250683 14250729 -10292828 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 693 24 32 0 0 chr3L 14251155 14251186 -10292371 + AT_rich Low_complexity Low_complexity 1 31 0 3 693 188 67 33 0 chr3L 14253480 14253510 -10290047 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 693 22 35 0 0 chr3L 14254530 14254559 -10288998 + AT_rich Low_complexity Low_complexity 1 29 0 3 693 240 163 0 0 chr3L 14255480 14255523 -10288034 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 693 26 74 0 0 chr3L 14256600 14256654 -10286903 + AT_rich Low_complexity Low_complexity 1 54 0 3 693 22 0 0 0 chr3L 14259118 14259140 -10284417 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 37607 2 0 0 chr3L 14260527 14264893 -10278664 + FW_DM LINE Jockey 327 4692 0 3 693 26 30 0 0 chr3L 14265546 14265579 -10277978 + AT_rich Low_complexity Low_complexity 1 33 0 3 693 22 0 0 0 chr3L 14266936 14266958 -10276599 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 44 56 0 0 chr3L 14277634 14277706 -10265851 + AT_rich Low_complexity Low_complexity 1 72 0 3 693 31 44 0 0 chr3L 14282171 14282216 -10261341 + AT_rich Low_complexity Low_complexity 1 45 0 3 693 22 56 0 0 chr3L 14283406 14283442 -10260115 + AT_rich Low_complexity Low_complexity 1 36 0 3 693 252 0 0 0 chr3L 14284236 14284264 -10259293 + (T)n Simple_repeat Simple_repeat 1 28 0 3 693 27 29 0 0 chr3L 14285042 14285076 -10258481 + AT_rich Low_complexity Low_complexity 1 34 0 3 693 21 0 0 0 chr3L 14285890 14285911 -10257646 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 21 0 0 0 chr3L 14286429 14286450 -10257107 + AT_rich Low_complexity Low_complexity 1 21 0 3 694 3698 9 0 0 chr3L 14289137 14289565 -10253992 - ROO_LTR LTR Pao 0 428 1 3 694 22 35 0 0 chr3L 14290557 14290586 -10252971 + AT_rich Low_complexity Low_complexity 1 29 0 3 694 51 31 0 0 chr3L 14291575 14291640 -10251917 + AT_rich Low_complexity Low_complexity 1 65 0 3 694 21 36 0 0 chr3L 14294581 14294609 -10248948 + AT_rich Low_complexity Low_complexity 1 28 0 3 694 330 67 0 0 chr3L 14295312 14295357 -10248200 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 694 21 0 0 0 chr3L 14295722 14295743 -10247814 + AT_rich Low_complexity Low_complexity 1 21 0 3 694 206 246 14 14 chr3L 14303847 14303921 -10239636 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 694 21 36 0 0 chr3L 14304903 14304931 -10238626 + AT_rich Low_complexity Low_complexity 1 28 0 3 694 225 0 0 0 chr3L 14305181 14305206 -10238351 + (T)n Simple_repeat Simple_repeat 1 25 0 3 694 41106 2 0 0 chr3L 14305215 14309926 -10233631 - BS2 LINE Jockey 0 4721 11 3 694 211 200 0 35 chr3L 14310026 14310083 -10233474 + A-rich Low_complexity Low_complexity 2 56 0 3 694 23 0 0 0 chr3L 14310097 14310120 -10233437 + AT_rich Low_complexity Low_complexity 1 23 0 3 694 21 57 0 0 chr3L 14312499 14312534 -10231023 + AT_rich Low_complexity Low_complexity 1 35 0 3 694 244 178 14 14 chr3L 14314910 14314984 -10228573 + ROO_I LTR Pao 662 735 -7521 3 694 354 182 0 0 chr3L 14315156 14315233 -10228324 + ROO_I LTR Pao 652 728 -7528 3 694 22 0 0 0 chr3L 14316603 14316625 -10226932 + AT_rich Low_complexity Low_complexity 1 22 0 3 694 25 83 0 0 chr3L 14317860 14317920 -10225637 + AT_rich Low_complexity Low_complexity 1 60 0 3 694 31 58 0 0 chr3L 14318483 14318535 -10225022 + AT_rich Low_complexity Low_complexity 1 52 0 3 694 23 0 0 0 chr3L 14319457 14319480 -10224077 + AT_rich Low_complexity Low_complexity 1 23 0 3 694 297 0 0 0 chr3L 14320158 14320191 -10223366 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 694 218 201 11 61 chr3L 14322605 14322785 -10220772 + (CCA)n Simple_repeat Simple_repeat 3 173 0 3 694 28 0 0 0 chr3L 14327482 14327510 -10216047 + AT_rich Low_complexity Low_complexity 1 28 0 3 694 218 213 16 0 chr3L 14328925 14328986 -10214571 + (CAAA)n Simple_repeat Simple_repeat 1 62 0 3 694 21 0 0 0 chr3L 14329393 14329414 -10214143 + AT_rich Low_complexity Low_complexity 1 21 0 3 694 21 95 0 0 chr3L 14330609 14330672 -10212885 + AT_rich Low_complexity Low_complexity 1 63 0 3 694 24 0 0 0 chr3L 14332727 14332751 -10210806 + AT_rich Low_complexity Low_complexity 1 24 0 3 694 22 70 0 0 chr3L 14334546 14334589 -10208968 + AT_rich Low_complexity Low_complexity 1 43 0 3 694 35 63 0 0 chr3L 14336616 14336679 -10206878 + AT_rich Low_complexity Low_complexity 1 63 0 3 694 21 36 0 0 chr3L 14343022 14343050 -10200507 + AT_rich Low_complexity Low_complexity 1 28 0 3 694 21 0 0 0 chr3L 14346387 14346408 -10197149 + AT_rich Low_complexity Low_complexity 1 21 0 3 694 217 95 23 23 chr3L 14354336 14354379 -10189178 + (TTA)n Simple_repeat Simple_repeat 1 43 0 3 694 217 276 0 26 chr3L 14354629 14354707 -10188850 + (TTG)n Simple_repeat Simple_repeat 1 76 0 3 694 32 43 0 0 chr3L 14354899 14354945 -10188612 + AT_rich Low_complexity Low_complexity 1 46 0 3 694 24 0 0 0 chr3L 14355021 14355045 -10188512 + AT_rich Low_complexity Low_complexity 1 24 0 3 694 23 33 0 0 chr3L 14355105 14355135 -10188422 + AT_rich Low_complexity Low_complexity 1 30 0 3 694 26 30 0 0 chr3L 14356349 14356382 -10187175 + AT_rich Low_complexity Low_complexity 1 33 0 3 694 24 0 0 0 chr3L 14362000 14362024 -10181533 + AT_rich Low_complexity Low_complexity 1 24 0 3 694 25 0 0 0 chr3L 14363698 14363723 -10179834 + AT_rich Low_complexity Low_complexity 1 25 0 3 694 37 23 0 0 chr3L 14370427 14370471 -10173086 + AT_rich Low_complexity Low_complexity 1 44 0 3 694 23 0 0 0 chr3L 14374459 14374482 -10169075 + AT_rich Low_complexity Low_complexity 1 23 0 3 694 237 196 18 18 chr3L 14377811 14377868 -10165689 + (ATG)n Simple_repeat Simple_repeat 3 59 0 3 694 21 0 0 0 chr3L 14379648 14379669 -10163888 + AT_rich Low_complexity Low_complexity 1 21 0 3 694 27 49 0 0 chr3L 14381635 14381676 -10161881 + AT_rich Low_complexity Low_complexity 1 41 0 3 694 26 0 0 0 chr3L 14383723 14383749 -10159808 + AT_rich Low_complexity Low_complexity 1 26 0 3 694 21 0 0 0 chr3L 14385057 14385078 -10158479 + AT_rich Low_complexity Low_complexity 1 21 0 3 694 26 0 0 0 chr3L 14385299 14385325 -10158232 + AT_rich Low_complexity Low_complexity 1 26 0 3 694 22 56 0 0 chr3L 14385480 14385516 -10158041 + AT_rich Low_complexity Low_complexity 1 36 0 3 694 43 97 0 0 chr3L 14386148 14386282 -10157275 + AT_rich Low_complexity Low_complexity 1 134 0 3 694 21 0 0 0 chr3L 14387792 14387813 -10155744 + AT_rich Low_complexity Low_complexity 1 21 0 3 694 24 0 0 0 chr3L 14390517 14390541 -10153016 + AT_rich Low_complexity Low_complexity 1 24 0 3 694 26 50 0 0 chr3L 14391309 14391349 -10152208 + AT_rich Low_complexity Low_complexity 1 40 0 3 694 23 0 0 0 chr3L 14393870 14393893 -10149664 + AT_rich Low_complexity Low_complexity 1 23 0 3 694 23 33 0 0 chr3L 14396045 14396075 -10147482 + AT_rich Low_complexity Low_complexity 1 30 0 3 694 21 57 0 0 chr3L 14396360 14396395 -10147162 + AT_rich Low_complexity Low_complexity 1 35 0 3 694 25 0 0 0 chr3L 14400363 14400388 -10143169 + AT_rich Low_complexity Low_complexity 1 25 0 3 694 236 107 34 51 chr3L 14401165 14401224 -10142333 + DNAREP1_DM LINE Penelope 94 151 -443 3 694 457 156 22 0 chr3L 14401265 14401355 -10142202 + DNAREP1_DM LINE Penelope 341 432 -162 3 694 275 109 0 113 chr3L 14401363 14401425 -10142132 + DNAREP1_DM LINE Penelope 539 593 -1 3 694 186 71 0 0 chr3L 14401467 14401495 -10142062 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 694 24 0 0 0 chr3L 14402246 14402270 -10141287 + AT_rich Low_complexity Low_complexity 1 24 0 3 694 35 24 0 0 chr3L 14402336 14402378 -10141179 + AT_rich Low_complexity Low_complexity 1 42 0 3 694 27 0 0 0 chr3L 14404143 14404170 -10139387 + AT_rich Low_complexity Low_complexity 1 27 0 3 694 225 178 54 14 chr3L 14404490 14404564 -10138993 + (TATAA)n Simple_repeat Simple_repeat 5 81 0 3 694 22 35 0 0 chr3L 14405807 14405836 -10137721 + AT_rich Low_complexity Low_complexity 1 29 0 3 694 33 0 0 0 chr3L 14405989 14406022 -10137535 + AT_rich Low_complexity Low_complexity 1 33 0 3 694 217 250 0 0 chr3L 14411494 14411550 -10132007 + A-rich Low_complexity Low_complexity 1 56 0 3 694 31 58 0 0 chr3L 14414614 14414666 -10128891 + AT_rich Low_complexity Low_complexity 1 52 0 3 694 243 177 59 71 chr3L 14414942 14415027 -10128530 - ROO_I LTR Pao -7516 740 657 3 694 199 73 0 68 chr3L 14415614 14415658 -10127899 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 694 374 228 0 11 chr3L 14416762 14416855 -10126702 + (TCTCTG)n Simple_repeat Simple_repeat 1 92 0 3 694 28 48 0 0 chr3L 14417877 14417919 -10125638 + AT_rich Low_complexity Low_complexity 1 42 0 3 695 21 36 0 0 chr3L 14424974 14425002 -10118555 + AT_rich Low_complexity Low_complexity 1 28 0 3 695 23 33 0 0 chr3L 14426445 14426475 -10117082 + AT_rich Low_complexity Low_complexity 1 30 0 3 695 202 220 0 0 chr3L 14428057 14428107 -10115450 + A-rich Low_complexity Low_complexity 1 50 0 3 695 35 0 0 0 chr3L 14432221 14432256 -10111301 + AT_rich Low_complexity Low_complexity 1 35 0 3 695 44 46 0 0 chr3L 14436232 14436297 -10107260 + AT_rich Low_complexity Low_complexity 1 65 0 3 695 21 0 0 0 chr3L 14439775 14439796 -10103761 + AT_rich Low_complexity Low_complexity 1 21 0 3 695 26 0 0 0 chr3L 14442112 14442138 -10101419 + AT_rich Low_complexity Low_complexity 1 26 0 3 695 198 0 0 0 chr3L 14443394 14443416 -10100141 + (T)n Simple_repeat Simple_repeat 1 22 0 3 695 186 174 0 0 chr3L 14445044 14445090 -10098467 + (TCCG)n Simple_repeat Simple_repeat 4 49 0 3 695 25 65 0 0 chr3L 14446962 14447008 -10096549 + AT_rich Low_complexity Low_complexity 1 46 0 3 695 221 167 0 0 chr3L 14449245 14449287 -10094270 + A-rich Low_complexity Low_complexity 1 42 0 3 695 45 93 0 0 chr3L 14449757 14449886 -10093671 + AT_rich Low_complexity Low_complexity 1 129 0 3 695 26 0 0 0 chr3L 14452143 14452169 -10091388 + AT_rich Low_complexity Low_complexity 1 26 0 3 695 200 195 24 0 chr3L 14453446 14453487 -10090070 + (TTCGGG)n Simple_repeat Simple_repeat 4 45 0 3 695 22 80 0 0 chr3L 14455551 14455601 -10087956 + AT_rich Low_complexity Low_complexity 1 50 0 3 695 21 82 0 0 chr3L 14459941 14459990 -10083567 + AT_rich Low_complexity Low_complexity 1 49 0 3 695 2389 0 0 0 chr3L 14461599 14461875 -10081682 + Copia_LTR LTR Copia 1 276 0 3 695 40891 1 0 1 chr3L 14461875 14466471 -10077086 + Copia_I LTR Copia 1 4593 0 3 695 2389 0 0 0 chr3L 14466471 14466747 -10076810 + Copia_LTR LTR Copia 1 276 0 3 695 21 0 0 0 chr3L 14468672 14468693 -10074864 + AT_rich Low_complexity Low_complexity 1 21 0 3 695 21 0 0 0 chr3L 14470486 14470507 -10073050 + AT_rich Low_complexity Low_complexity 1 21 0 3 695 22 0 0 0 chr3L 14474738 14474760 -10068797 + AT_rich Low_complexity Low_complexity 1 22 0 3 695 28 86 0 0 chr3L 14474993 14475063 -10068494 + AT_rich Low_complexity Low_complexity 1 70 0 3 695 22 0 0 0 chr3L 14475408 14475430 -10068127 + AT_rich Low_complexity Low_complexity 1 22 0 3 695 288 70 0 0 chr3L 14477112 14477155 -10066402 + (CAG)n Simple_repeat Simple_repeat 2 44 0 3 695 211 216 0 0 chr3L 14479771 14479822 -10063735 + A-rich Low_complexity Low_complexity 1 51 0 3 695 200 284 0 0 chr3L 14479879 14479946 -10063611 + A-rich Low_complexity Low_complexity 1 67 0 3 695 23 0 0 0 chr3L 14480221 14480244 -10063313 + AT_rich Low_complexity Low_complexity 1 23 0 3 695 22 56 0 0 chr3L 14483587 14483623 -10059934 + AT_rich Low_complexity Low_complexity 1 36 0 3 695 22 70 0 0 chr3L 14484768 14484811 -10058746 + AT_rich Low_complexity Low_complexity 1 43 0 3 695 189 121 0 0 chr3L 14488834 14488867 -10054690 + (TTCGG)n Simple_repeat Simple_repeat 3 35 0 3 695 29 28 0 0 chr3L 14490802 14490838 -10052719 + AT_rich Low_complexity Low_complexity 1 36 0 3 695 189 178 0 0 chr3L 14492269 14492314 -10051243 + (CAA)n Simple_repeat Simple_repeat 3 47 0 3 695 29 60 0 0 chr3L 14493557 14493607 -10049950 + AT_rich Low_complexity Low_complexity 1 50 0 3 695 21 36 0 0 chr3L 14494059 14494087 -10049470 + AT_rich Low_complexity Low_complexity 1 28 0 3 695 21 0 0 0 chr3L 14495519 14495540 -10048017 + AT_rich Low_complexity Low_complexity 1 21 0 3 695 314 269 28 9 chr3L 14497264 14497275 -10046282 + P_DG DNA P 2744 2851 -34 3 695 620 126 0 0 chr3L 14497275 14497370 -10046187 - DNAREP1_DM LINE Penelope 0 594 500 3 695 531 196 19 57 chr3L 14497424 14497581 -10045976 - DNAREP1_DM LINE Penelope -443 151 1 3 695 40 37 0 0 chr3L 14500568 14500622 -10042935 + AT_rich Low_complexity Low_complexity 1 54 0 3 695 241 169 41 27 chr3L 14503765 14503838 -10039719 + (TTAA)n Simple_repeat Simple_repeat 3 76 0 3 695 31 26 0 0 chr3L 14506717 14506755 -10036802 + AT_rich Low_complexity Low_complexity 1 38 0 3 695 34 65 0 0 chr3L 14513959 14514021 -10029536 + AT_rich Low_complexity Low_complexity 1 62 0 3 695 40376 2 0 0 chr3L 14517483 14522176 -10021381 + FW_DM LINE Jockey 1 4691 -1 3 695 225 240 20 0 chr3L 14523000 14523050 -10020507 + (CTCGG)n Simple_repeat Simple_repeat 4 54 0 3 695 22 56 0 0 chr3L 14527863 14527899 -10015658 + AT_rich Low_complexity Low_complexity 1 36 0 3 695 33 80 0 0 chr3L 14530446 14530521 -10013036 + AT_rich Low_complexity Low_complexity 1 75 0 3 695 28 0 0 0 chr3L 14533509 14533537 -10010020 + AT_rich Low_complexity Low_complexity 1 28 0 3 695 23 0 0 0 chr3L 14536097 14536120 -10007437 + AT_rich Low_complexity Low_complexity 1 23 0 3 695 24 0 0 0 chr3L 14539516 14539540 -10004017 + AT_rich Low_complexity Low_complexity 1 24 0 3 695 34 55 0 0 chr3L 14540631 14540686 -10002871 + AT_rich Low_complexity Low_complexity 1 55 0 3 695 207 162 0 0 chr3L 14544119 14544156 -9999401 + GA-rich Low_complexity Low_complexity 2 38 0 3 695 201 39 0 0 chr3L 14544420 14544446 -9999111 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 695 28 48 0 0 chr3L 14545105 14545147 -9998410 + AT_rich Low_complexity Low_complexity 1 42 0 3 695 230 0 33 0 chr3L 14547700 14547730 -9995827 + (TTA)n Simple_repeat Simple_repeat 3 33 0 3 696 23 0 0 0 chr3L 14549934 14549957 -9993600 + AT_rich Low_complexity Low_complexity 1 23 0 3 696 39 38 0 0 chr3L 14550151 14550204 -9993353 + AT_rich Low_complexity Low_complexity 1 53 0 3 696 33 56 0 0 chr3L 14550901 14550955 -9992602 + AT_rich Low_complexity Low_complexity 1 54 0 3 696 23 54 0 0 chr3L 14551477 14551514 -9992043 + AT_rich Low_complexity Low_complexity 1 37 0 3 696 23 68 0 0 chr3L 14551538 14551582 -9991975 + AT_rich Low_complexity Low_complexity 1 44 0 3 696 28 0 0 0 chr3L 14552735 14552763 -9990794 + AT_rich Low_complexity Low_complexity 1 28 0 3 696 487 161 0 12 chr3L 14556301 14556383 -9987174 - DNAREP1_DM LINE Penelope -107 487 407 3 696 24 53 0 0 chr3L 14556441 14556479 -9987078 + AT_rich Low_complexity Low_complexity 1 38 0 3 696 22 35 0 0 chr3L 14556565 14556594 -9986963 + AT_rich Low_complexity Low_complexity 1 29 0 3 696 232 254 0 0 chr3L 14557271 14557338 -9986219 + T-rich Low_complexity Low_complexity 1 67 0 3 696 25 90 0 0 chr3L 14557859 14557926 -9985631 + AT_rich Low_complexity Low_complexity 1 67 0 3 696 24 53 0 0 chr3L 14561199 14561237 -9982320 + AT_rich Low_complexity Low_complexity 1 38 0 3 696 27 0 0 0 chr3L 14562266 14562293 -9981264 + AT_rich Low_complexity Low_complexity 1 27 0 3 696 24 0 0 0 chr3L 14563166 14563190 -9980367 + AT_rich Low_complexity Low_complexity 1 24 0 3 696 30 27 0 0 chr3L 14564785 14564822 -9978735 + AT_rich Low_complexity Low_complexity 1 37 0 3 696 23 33 0 0 chr3L 14564928 14564958 -9978599 + AT_rich Low_complexity Low_complexity 1 30 0 3 696 24 0 0 0 chr3L 14567867 14567891 -9975666 + AT_rich Low_complexity Low_complexity 1 24 0 3 696 26 50 0 0 chr3L 14570147 14570187 -9973370 + AT_rich Low_complexity Low_complexity 1 40 0 3 696 23 0 0 0 chr3L 14570219 14570242 -9973315 + AT_rich Low_complexity Low_complexity 1 23 0 3 696 192 40 0 0 chr3L 14573712 14573737 -9969820 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 696 35 71 0 0 chr3L 14576327 14576397 -9967160 + AT_rich Low_complexity Low_complexity 1 70 0 3 696 283 145 29 0 chr3L 14577659 14577728 -9965829 + (CAG)n Simple_repeat Simple_repeat 1 71 0 3 696 21 0 0 0 chr3L 14579787 14579808 -9963749 + AT_rich Low_complexity Low_complexity 1 21 0 3 696 23 33 0 0 chr3L 14580569 14580599 -9962958 + AT_rich Low_complexity Low_complexity 1 30 0 3 696 26 64 0 0 chr3L 14582315 14582362 -9961195 + AT_rich Low_complexity Low_complexity 1 47 0 3 696 23 0 0 0 chr3L 14586172 14586195 -9957362 + AT_rich Low_complexity Low_complexity 1 23 0 3 696 227 343 9 28 chr3L 14591556 14591664 -9951893 - ROO_I LTR Pao -7514 742 637 3 696 24 0 0 0 chr3L 14594427 14594451 -9949106 + AT_rich Low_complexity Low_complexity 1 24 0 3 696 32 0 0 0 chr3L 14596144 14596176 -9947381 + AT_rich Low_complexity Low_complexity 1 32 0 3 696 25 75 0 0 chr3L 14597103 14597156 -9946401 + AT_rich Low_complexity Low_complexity 1 53 0 3 696 34 24 0 0 chr3L 14597206 14597247 -9946310 + AT_rich Low_complexity Low_complexity 1 41 0 3 696 28 29 0 0 chr3L 14598005 14598040 -9945517 + AT_rich Low_complexity Low_complexity 1 35 0 3 696 26 98 0 0 chr3L 14602877 14602959 -9940598 + AT_rich Low_complexity Low_complexity 1 82 0 3 696 23 92 0 0 chr3L 14603800 14603865 -9939692 + AT_rich Low_complexity Low_complexity 1 65 0 3 696 48 32 0 0 chr3L 14604577 14604639 -9938918 + AT_rich Low_complexity Low_complexity 1 62 0 3 696 29 98 0 0 chr3L 14604706 14604798 -9938759 + AT_rich Low_complexity Low_complexity 1 92 0 3 696 180 214 0 0 chr3L 14605218 14605274 -9938283 + (CAGT)n Simple_repeat Simple_repeat 4 59 0 3 696 32 26 0 0 chr3L 14607100 14607139 -9936418 + AT_rich Low_complexity Low_complexity 1 39 0 3 696 28 0 0 0 chr3L 14608256 14608284 -9935273 + AT_rich Low_complexity Low_complexity 1 28 0 3 696 30 0 0 0 chr3L 14608497 14608527 -9935030 + AT_rich Low_complexity Low_complexity 1 30 0 3 696 25 0 0 0 chr3L 14608589 14608614 -9934943 + AT_rich Low_complexity Low_complexity 1 25 0 3 696 21 0 0 0 chr3L 14608969 14608990 -9934567 + AT_rich Low_complexity Low_complexity 1 21 0 3 696 29 70 0 0 chr3L 14609870 14609927 -9933630 + AT_rich Low_complexity Low_complexity 1 57 0 3 696 28 0 0 0 chr3L 14611946 14611974 -9931583 + AT_rich Low_complexity Low_complexity 1 28 0 3 696 22 35 0 0 chr3L 14615491 14615520 -9928037 + AT_rich Low_complexity Low_complexity 1 29 0 3 696 26 64 0 0 chr3L 14617327 14617374 -9926183 + AT_rich Low_complexity Low_complexity 1 47 0 3 696 22 0 0 0 chr3L 14617405 14617427 -9926130 + AT_rich Low_complexity Low_complexity 1 22 0 3 696 21 0 0 0 chr3L 14623359 14623380 -9920177 + AT_rich Low_complexity Low_complexity 1 21 0 3 696 961 122 151 12 chr3L 14623397 14623563 -9919994 + DNAREP1_DM LINE Penelope 406 594 0 3 696 27 29 0 0 chr3L 14626528 14626562 -9916995 + AT_rich Low_complexity Low_complexity 1 34 0 3 696 22 0 0 0 chr3L 14626602 14626624 -9916933 + AT_rich Low_complexity Low_complexity 1 22 0 3 696 205 260 0 0 chr3L 14627819 14627869 -9915688 + CT-rich Low_complexity Low_complexity 2 51 0 3 696 21 71 0 0 chr3L 14628473 14628515 -9915042 + AT_rich Low_complexity Low_complexity 1 42 0 3 696 22 35 0 0 chr3L 14633968 14633997 -9909560 + AT_rich Low_complexity Low_complexity 1 29 0 3 696 182 150 25 0 chr3L 14635319 14635359 -9908198 + (TCCG)n Simple_repeat Simple_repeat 1 41 0 3 696 27 0 0 0 chr3L 14637505 14637532 -9906025 + AT_rich Low_complexity Low_complexity 1 27 0 3 696 21 0 0 0 chr3L 14638615 14638636 -9904921 + AT_rich Low_complexity Low_complexity 1 21 0 3 696 21 36 0 0 chr3L 14642794 14642822 -9900735 + AT_rich Low_complexity Low_complexity 1 28 0 3 696 22 35 0 0 chr3L 14643664 14643693 -9899864 + AT_rich Low_complexity Low_complexity 1 29 0 3 696 189 0 0 0 chr3L 14648792 14648813 -9894744 + (T)n Simple_repeat Simple_repeat 1 21 0 3 696 21 0 0 0 chr3L 14649293 14649314 -9894243 + AT_rich Low_complexity Low_complexity 1 21 0 3 696 31 0 0 0 chr3L 14662185 14662216 -9881341 + AT_rich Low_complexity Low_complexity 1 31 0 3 696 235 318 11 11 chr3L 14662677 14662766 -9880791 + (CAA)n Simple_repeat Simple_repeat 2 90 0 3 696 21 36 0 0 chr3L 14664619 14664647 -9878910 + AT_rich Low_complexity Low_complexity 1 28 0 3 696 180 0 0 0 chr3L 14666154 14666174 -9877383 + (AAATG)n Simple_repeat Simple_repeat 3 22 0 3 696 22 56 0 0 chr3L 14669376 14669412 -9874145 + AT_rich Low_complexity Low_complexity 1 36 0 3 696 317 250 0 0 chr3L 14670714 14670794 -9872763 + (CTG)n Simple_repeat Simple_repeat 1 80 0 3 696 27 29 0 0 chr3L 14671530 14671564 -9871993 + AT_rich Low_complexity Low_complexity 1 34 0 3 696 23 0 0 0 chr3L 14674425 14674448 -9869109 + AT_rich Low_complexity Low_complexity 1 23 0 3 696 213 39 0 0 chr3L 14675089 14675115 -9868442 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 696 37 81 0 0 chr3L 14675397 14675483 -9868074 + AT_rich Low_complexity Low_complexity 1 86 0 3 696 36 0 0 0 chr3L 14676741 14676777 -9866780 + AT_rich Low_complexity Low_complexity 1 36 0 3 697 26 0 0 0 chr3L 14681043 14681069 -9862488 + AT_rich Low_complexity Low_complexity 1 26 0 3 697 22 56 0 0 chr3L 14682071 14682107 -9861450 + AT_rich Low_complexity Low_complexity 1 36 0 3 697 186 103 0 0 chr3L 14687065 14687094 -9856463 + (CAT)n Simple_repeat Simple_repeat 2 30 0 3 697 47 44 0 0 chr3L 14690276 14690344 -9853213 + AT_rich Low_complexity Low_complexity 1 68 0 3 697 32 86 0 0 chr3L 14696449 14696530 -9847027 + AT_rich Low_complexity Low_complexity 1 81 0 3 697 27 29 0 0 chr3L 14697046 14697080 -9846477 + AT_rich Low_complexity Low_complexity 1 34 0 3 697 26 0 0 0 chr3L 14702366 14702392 -9841165 + AT_rich Low_complexity Low_complexity 1 26 0 3 697 28 86 0 0 chr3L 14702473 14702543 -9841014 + AT_rich Low_complexity Low_complexity 1 70 0 3 697 23 0 0 0 chr3L 14702841 14702864 -9840693 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 26 50 0 0 chr3L 14705239 14705279 -9838278 + AT_rich Low_complexity Low_complexity 1 40 0 3 697 252 86 0 0 chr3L 14705761 14705796 -9837761 + (TCCA)n Simple_repeat Simple_repeat 1 35 0 3 697 183 162 0 0 chr3L 14709468 14709505 -9834052 + GA-rich Low_complexity Low_complexity 4 40 0 3 697 195 42 0 0 chr3L 14712726 14712750 -9830807 + (CAG)n Simple_repeat Simple_repeat 2 25 0 3 697 15303 6 3 2 chr3L 14714331 14716121 -9827436 + DMRT1B LINE R1 3391 5183 0 3 697 192 77 0 0 chr3L 14717805 14717831 -9825726 + (TTCCG)n Simple_repeat Simple_repeat 5 30 0 3 697 23 33 0 0 chr3L 14718603 14718633 -9824924 + AT_rich Low_complexity Low_complexity 1 30 0 3 697 35 71 0 0 chr3L 14718654 14718724 -9824833 + AT_rich Low_complexity Low_complexity 1 70 0 3 697 21111 5 0 0 chr3L 14718753 14721221 -9822336 + DOC LINE Jockey 873 3340 -1385 3 697 3866 20 12 2 chr3L 14721193 14721682 -9821875 + DOC LINE Jockey 4232 4725 0 3 697 23 0 0 0 chr3L 14723659 14723682 -9819875 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 23 0 0 0 chr3L 14725112 14725135 -9818422 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 203 186 0 48 chr3L 14726741 14726773 -9816784 + (TTAAA)n Simple_repeat Simple_repeat 2 33 0 3 697 180 0 0 0 chr3L 14726773 14726793 -9816764 + (TTA)n Simple_repeat Simple_repeat 1 20 0 3 697 203 186 0 48 chr3L 14726793 14726822 -9816735 + (TTAAA)n Simple_repeat Simple_repeat 4 30 0 3 697 276 111 0 0 chr3L 14728425 14728470 -9815087 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 3 697 24 32 0 0 chr3L 14730172 14730203 -9813354 + AT_rich Low_complexity Low_complexity 1 31 0 3 697 183 42 0 0 chr3L 14730463 14730487 -9813070 + (CAGC)n Simple_repeat Simple_repeat 1 24 0 3 697 180 97 0 0 chr3L 14732496 14732527 -9811030 + (A)n Simple_repeat Simple_repeat 1 31 0 3 697 276 254 0 95 chr3L 14732583 14732709 -9810848 + ROO_I LTR Pao 633 746 -7510 3 697 259 271 0 14 chr3L 14732834 14732905 -9810652 + (CAG)n Simple_repeat Simple_repeat 2 71 0 3 697 21 0 0 0 chr3L 14733499 14733520 -9810037 + AT_rich Low_complexity Low_complexity 1 21 0 3 697 27 73 0 0 chr3L 14735053 14735108 -9808449 + AT_rich Low_complexity Low_complexity 1 55 0 3 697 33 25 0 0 chr3L 14737195 14737235 -9806322 + AT_rich Low_complexity Low_complexity 1 40 0 3 697 28 48 0 0 chr3L 14737245 14737287 -9806270 + AT_rich Low_complexity Low_complexity 1 42 0 3 697 21 36 0 0 chr3L 14738417 14738445 -9805112 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 38 22 0 0 chr3L 14738997 14739042 -9804515 + AT_rich Low_complexity Low_complexity 1 45 0 3 697 23 0 0 0 chr3L 14739310 14739333 -9804224 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 21 0 0 0 chr3L 14740770 14740791 -9802766 + AT_rich Low_complexity Low_complexity 1 21 0 3 697 186 43 0 0 chr3L 14742016 14742039 -9801518 + (CTG)n Simple_repeat Simple_repeat 1 23 0 3 697 248 206 9 81 chr3L 14742573 14742684 -9800873 - ROO_I LTR Pao -7515 741 639 3 697 234 62 0 0 chr3L 14742712 14742744 -9800813 + (TCC)n Simple_repeat Simple_repeat 1 32 0 3 697 21 107 0 0 chr3L 14743328 14743412 -9800145 + AT_rich Low_complexity Low_complexity 1 84 0 3 697 189 154 0 0 chr3L 14743661 14743700 -9799857 + (ATTG)n Simple_repeat Simple_repeat 1 39 0 3 697 252 165 0 0 chr3L 14744269 14744348 -9799209 - ROO_I LTR Pao -7522 734 656 3 697 297 193 0 35 chr3L 14744559 14744645 -9798912 - ROO_I LTR Pao -7533 723 641 3 697 270 133 33 0 chr3L 14744672 14744732 -9798825 - ROO_I LTR Pao -7518 738 677 3 697 41 48 0 0 chr3L 14745491 14745553 -9798004 + AT_rich Low_complexity Low_complexity 1 62 0 3 697 267 114 0 0 chr3L 14746186 14746230 -9797327 + (CTG)n Simple_repeat Simple_repeat 1 44 0 3 697 241 190 0 17 chr3L 14749623 14749682 -9793875 + CT-rich Low_complexity Low_complexity 1 58 0 3 697 231 133 0 0 chr3L 14750478 14750523 -9793034 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 697 21 36 0 0 chr3L 14752665 14752693 -9790864 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 209 194 0 0 chr3L 14752943 14752979 -9790578 + (TATG)n Simple_repeat Simple_repeat 1 36 0 3 697 187 31 62 0 chr3L 14755754 14755786 -9787771 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 697 21 0 0 0 chr3L 14759457 14759478 -9784079 + AT_rich Low_complexity Low_complexity 1 21 0 3 697 25 31 0 0 chr3L 14759628 14759660 -9783897 + AT_rich Low_complexity Low_complexity 1 32 0 3 697 23 0 0 0 chr3L 14760437 14760460 -9783097 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 23 54 0 0 chr3L 14769341 14769378 -9774179 + AT_rich Low_complexity Low_complexity 1 37 0 3 697 219 244 0 0 chr3L 14774504 14774549 -9769008 + (TATG)n Simple_repeat Simple_repeat 3 47 0 3 697 23 33 0 0 chr3L 14774873 14774903 -9768654 + AT_rich Low_complexity Low_complexity 1 30 0 3 697 25 31 0 0 chr3L 14774947 14774979 -9768578 + AT_rich Low_complexity Low_complexity 1 32 0 3 697 25 0 0 0 chr3L 14779724 14779749 -9763808 + AT_rich Low_complexity Low_complexity 1 25 0 3 697 210 193 0 0 chr3L 14782558 14782615 -9760942 + (CAG)n Simple_repeat Simple_repeat 3 59 0 3 697 218 81 27 0 chr3L 14784822 14784859 -9758698 + (CATAA)n Simple_repeat Simple_repeat 4 41 0 3 697 279 79 0 0 chr3L 14786028 14786066 -9757491 + (CAG)n Simple_repeat Simple_repeat 2 39 0 3 697 23 0 0 0 chr3L 14786690 14786713 -9756844 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 29 47 0 0 chr3L 14786758 14786801 -9756756 + AT_rich Low_complexity Low_complexity 1 43 0 3 697 273 57 0 0 chr3L 14791332 14791367 -9752190 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 697 204 125 0 0 chr3L 14791389 14791421 -9752136 + (CAA)n Simple_repeat Simple_repeat 1 32 0 3 697 259 289 7 34 chr3L 14792392 14792539 -9751018 + A-rich Low_complexity Low_complexity 2 144 0 3 697 26 0 0 0 chr3L 14792640 14792666 -9750891 + AT_rich Low_complexity Low_complexity 1 26 0 3 697 292 235 0 0 chr3L 14792941 14793026 -9750531 + A-rich Low_complexity Low_complexity 1 85 0 3 697 201 78 57 38 chr3L 14793192 14793245 -9750312 + A-rich Low_complexity Low_complexity 3 56 0 3 697 22 70 0 0 chr3L 14795395 14795438 -9748119 + AT_rich Low_complexity Low_complexity 1 43 0 3 697 21 0 0 0 chr3L 14797622 14797643 -9745914 + AT_rich Low_complexity Low_complexity 1 21 0 3 697 180 152 0 0 chr3L 14798089 14798122 -9745435 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 3 697 23 0 0 0 chr3L 14799400 14799423 -9744134 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 183 42 0 0 chr3L 14801351 14801375 -9742182 + (A)n Simple_repeat Simple_repeat 1 24 0 3 697 21 0 0 0 chr3L 14802464 14802485 -9741072 + AT_rich Low_complexity Low_complexity 1 21 0 3 697 22 35 0 0 chr3L 14803270 14803299 -9740258 + AT_rich Low_complexity Low_complexity 1 29 0 3 697 195 129 0 0 chr3L 14805754 14805785 -9737772 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3 697 27 29 0 0 chr3L 14806285 14806319 -9737238 + AT_rich Low_complexity Low_complexity 1 34 0 3 697 25 51 0 0 chr3L 14807535 14807574 -9735983 + AT_rich Low_complexity Low_complexity 1 39 0 3 697 186 43 0 0 chr3L 14807906 14807929 -9735628 + (A)n Simple_repeat Simple_repeat 1 23 0 3 697 183 80 0 0 chr3L 14810900 14810925 -9732632 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 698 23 0 0 0 chr3L 14812075 14812098 -9731459 + AT_rich Low_complexity Low_complexity 1 23 0 3 698 21 36 0 0 chr3L 14812608 14812636 -9730921 + AT_rich Low_complexity Low_complexity 1 28 0 3 698 192 135 0 0 chr3L 14813147 14813184 -9730373 + (CAAAAA)n Simple_repeat Simple_repeat 1 37 0 3 698 309 109 0 0 chr3L 14814403 14814458 -9729099 + (ACTG)n Simple_repeat Simple_repeat 1 55 0 3 698 215 170 0 36 chr3L 14815631 14815686 -9727871 + (TTGGGG)n Simple_repeat Simple_repeat 2 54 0 3 698 22 0 0 0 chr3L 14816400 14816422 -9727135 + AT_rich Low_complexity Low_complexity 1 22 0 3 698 237 65 0 0 chr3L 14816953 14816984 -9726573 + (CTTTG)n Simple_repeat Simple_repeat 2 32 0 3 698 22 56 0 0 chr3L 14817177 14817213 -9726344 + AT_rich Low_complexity Low_complexity 1 36 0 3 698 216 200 0 0 chr3L 14817455 14817505 -9726052 + (CAGTT)n Simple_repeat Simple_repeat 4 53 0 3 698 3570 0 0 21 chr3L 14818280 14818713 -9724844 + Stalker2_LTR LTR Gypsy 1 424 0 3 698 51574 14 5 2 chr3L 14818713 14825517 -9718040 + Stalker2_I LTR Gypsy 1 6530 0 3 698 3570 0 0 21 chr3L 14825517 14825950 -9717607 + Stalker2_LTR LTR Gypsy 1 424 0 3 698 228 35 0 0 chr3L 14826296 14826325 -9717232 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 698 189 0 0 0 chr3L 14826791 14826812 -9716745 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 698 24 0 0 0 chr3L 14827764 14827788 -9715769 + AT_rich Low_complexity Low_complexity 1 24 0 3 698 24 53 0 0 chr3L 14828400 14828438 -9715119 + AT_rich Low_complexity Low_complexity 1 38 0 3 698 228 67 0 0 chr3L 14828965 14828995 -9714562 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 698 27 0 0 0 chr3L 14829915 14829942 -9713615 + AT_rich Low_complexity Low_complexity 1 27 0 3 698 195 114 0 0 chr3L 14831572 14831607 -9711950 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 698 22 0 0 0 chr3L 14832099 14832121 -9711436 + AT_rich Low_complexity Low_complexity 1 22 0 3 698 32 0 0 0 chr3L 14832193 14832225 -9711332 + AT_rich Low_complexity Low_complexity 1 32 0 3 698 22 0 0 0 chr3L 14832241 14832263 -9711294 + AT_rich Low_complexity Low_complexity 1 22 0 3 698 23 0 0 0 chr3L 14835299 14835322 -9708235 + AT_rich Low_complexity Low_complexity 1 23 0 3 698 180 152 0 0 chr3L 14836763 14836796 -9706761 + (CAGT)n Simple_repeat Simple_repeat 1 33 0 3 698 21 36 0 0 chr3L 14837213 14837241 -9706316 + AT_rich Low_complexity Low_complexity 1 28 0 3 698 204 337 0 11 chr3L 14840965 14841055 -9702502 + (CATATA)n Simple_repeat Simple_repeat 4 92 0 3 698 208 200 22 0 chr3L 14840987 14841032 -9702525 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 698 21 0 0 0 chr3L 14841474 14841495 -9702062 + AT_rich Low_complexity Low_complexity 1 21 0 3 698 21 36 0 0 chr3L 14841777 14841805 -9701752 + AT_rich Low_complexity Low_complexity 1 28 0 3 698 273 98 0 0 chr3L 14845210 14845251 -9698306 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 698 21 0 0 0 chr3L 14846008 14846029 -9697528 + AT_rich Low_complexity Low_complexity 1 21 0 3 698 25 0 0 0 chr3L 14847078 14847103 -9696454 + AT_rich Low_complexity Low_complexity 1 25 0 3 698 180 111 0 0 chr3L 14847556 14847583 -9695974 + (TGGG)n Simple_repeat Simple_repeat 3 29 0 3 698 186 43 0 0 chr3L 14847824 14847847 -9695710 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 698 24 85 0 0 chr3L 14848118 14848177 -9695380 + AT_rich Low_complexity Low_complexity 1 59 0 3 698 22 35 0 0 chr3L 14849523 14849552 -9694005 + AT_rich Low_complexity Low_complexity 1 29 0 3 698 252 59 0 0 chr3L 14851922 14851956 -9691601 + (TTA)n Simple_repeat Simple_repeat 2 35 0 3 698 44 63 0 0 chr3L 14855823 14855902 -9687655 + AT_rich Low_complexity Low_complexity 1 79 0 3 698 23 68 0 0 chr3L 14855984 14856028 -9687529 + AT_rich Low_complexity Low_complexity 1 44 0 3 698 23 33 0 0 chr3L 14857271 14857301 -9686256 + AT_rich Low_complexity Low_complexity 1 30 0 3 698 253 273 0 26 chr3L 14862622 14862735 -9680822 + (CAG)n Simple_repeat Simple_repeat 1 110 0 3 698 29 47 0 0 chr3L 14864857 14864900 -9678657 + AT_rich Low_complexity Low_complexity 1 43 0 3 698 213 200 11 32 chr3L 14865264 14865357 -9678200 + (TTG)n Simple_repeat Simple_repeat 3 93 0 3 698 196 114 22 43 chr3L 14865400 14865446 -9678111 + (CTG)n Simple_repeat Simple_repeat 3 47 0 3 698 237 239 0 0 chr3L 14865584 14865655 -9677902 - ROO_I LTR Pao -7515 741 671 3 698 201 180 0 0 chr3L 14868341 14868391 -9675166 + A-rich Low_complexity Low_complexity 1 50 0 3 698 275 169 11 53 chr3L 14868910 14869004 -9674553 + ROO_I LTR Pao 643 732 -7524 3 698 21 0 0 0 chr3L 14871835 14871856 -9671701 + AT_rich Low_complexity Low_complexity 1 21 0 3 698 35 0 0 0 chr3L 14874120 14874155 -9669402 + AT_rich Low_complexity Low_complexity 1 35 0 3 698 183 156 0 0 chr3L 14874498 14874530 -9669027 + (CAG)n Simple_repeat Simple_repeat 2 33 0 3 698 315 104 0 0 chr3L 14874650 14874698 -9668859 + (CAG)n Simple_repeat Simple_repeat 3 50 0 3 698 191 191 10 60 chr3L 14874841 14874941 -9668616 + (CAA)n Simple_repeat Simple_repeat 3 97 0 3 698 236 53 0 26 chr3L 14874960 14874999 -9668558 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 698 211 304 0 0 chr3L 14875054 14875133 -9668424 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 698 207 0 0 0 chr3L 14875886 14875909 -9667648 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 698 24 0 0 0 chr3L 14876579 14876603 -9666954 + AT_rich Low_complexity Low_complexity 1 24 0 3 698 300 127 0 0 chr3L 14881118 14881173 -9662384 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 698 23 68 0 0 chr3L 14881227 14881271 -9662286 + AT_rich Low_complexity Low_complexity 1 44 0 3 698 27 49 0 0 chr3L 14883667 14883708 -9659849 + AT_rich Low_complexity Low_complexity 1 41 0 3 698 207 0 0 0 chr3L 14884260 14884283 -9659274 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 698 183 186 0 0 chr3L 14885907 14885950 -9657607 + (CTG)n Simple_repeat Simple_repeat 3 45 0 3 698 21 0 0 0 chr3L 14888335 14888356 -9655201 + AT_rich Low_complexity Low_complexity 1 21 0 3 698 210 128 0 0 chr3L 14888580 14888619 -9654938 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 698 34 65 0 0 chr3L 14889741 14889803 -9653754 + AT_rich Low_complexity Low_complexity 1 62 0 3 698 21 36 0 0 chr3L 14891250 14891278 -9652279 + AT_rich Low_complexity Low_complexity 1 28 0 3 698 243 250 0 0 chr3L 14892305 14892365 -9651192 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 698 22 0 0 0 chr3L 14892837 14892859 -9650698 + AT_rich Low_complexity Low_complexity 1 22 0 3 698 195 146 0 0 chr3L 14894740 14894781 -9648776 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 698 195 42 0 0 chr3L 14896188 14896212 -9647345 + (CAAGG)n Simple_repeat Simple_repeat 5 28 0 3 698 291 343 0 0 chr3L 14897419 14897518 -9646039 + (CAG)n Simple_repeat Simple_repeat 1 99 0 3 698 38 39 0 0 chr3L 14903025 14903077 -9640480 + AT_rich Low_complexity Low_complexity 1 52 0 3 698 194 45 91 0 chr3L 14904027 14904071 -9639486 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 698 250 179 0 35 chr3L 14908170 14908257 -9635300 + (TTG)n Simple_repeat Simple_repeat 1 84 0 3 698 21 0 0 0 chr3L 14908971 14908992 -9634565 + AT_rich Low_complexity Low_complexity 1 21 0 3 698 25 31 0 0 chr3L 14911315 14911347 -9632210 + AT_rich Low_complexity Low_complexity 1 32 0 3 698 42 77 0 0 chr3L 14911390 14911481 -9632076 + AT_rich Low_complexity Low_complexity 1 91 0 3 698 47 0 0 0 chr3L 14912141 14912188 -9631369 + AT_rich Low_complexity Low_complexity 1 47 0 3 698 240 238 0 0 chr3L 14912270 14912333 -9631224 + DNAREP1_DM LINE Penelope 381 443 -151 3 698 37 23 0 0 chr3L 14918422 14918466 -9625091 + AT_rich Low_complexity Low_complexity 1 44 0 3 698 21 57 0 0 chr3L 14920250 14920285 -9623272 + AT_rich Low_complexity Low_complexity 1 35 0 3 698 25 31 0 0 chr3L 14922149 14922181 -9621376 + AT_rich Low_complexity Low_complexity 1 32 0 3 698 180 214 0 0 chr3L 14922992 14923048 -9620509 + (CGAAA)n Simple_repeat Simple_repeat 3 58 0 3 698 21 36 0 0 chr3L 14923066 14923094 -9620463 + AT_rich Low_complexity Low_complexity 1 28 0 3 698 21 0 0 0 chr3L 14924498 14924519 -9619038 + AT_rich Low_complexity Low_complexity 1 21 0 3 698 23 54 0 0 chr3L 14924576 14924613 -9618944 + AT_rich Low_complexity Low_complexity 1 37 0 3 698 26 50 0 0 chr3L 14926541 14926581 -9616976 + AT_rich Low_complexity Low_complexity 1 40 0 3 698 204 111 0 0 chr3L 14927331 14927367 -9616190 + (CAACC)n Simple_repeat Simple_repeat 2 37 0 3 698 186 133 0 0 chr3L 14928179 14928209 -9615348 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 698 25 31 0 0 chr3L 14930654 14930686 -9612871 + AT_rich Low_complexity Low_complexity 1 32 0 3 698 23 0 0 0 chr3L 14932474 14932497 -9611060 + AT_rich Low_complexity Low_complexity 1 23 0 3 698 24 0 0 0 chr3L 14934563 14934587 -9608970 + AT_rich Low_complexity Low_complexity 1 24 0 3 698 27 62 0 0 chr3L 14938107 14938155 -9605402 + AT_rich Low_complexity Low_complexity 1 48 0 3 698 21 36 0 0 chr3L 14940099 14940127 -9603430 + AT_rich Low_complexity Low_complexity 1 28 0 3 698 182 37 0 36 chr3L 14941696 14941724 -9601833 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 699 1074 61 0 0 chr3L 14944234 14944382 -9599175 - TRANSIB2 DNA Transib -325 2519 2372 3 699 477 0 59 0 chr3L 14944373 14944441 -9599116 - TRANSIB2 DNA Transib -2762 82 11 3 699 513 217 156 72 chr3L 14944839 14945102 -9598455 - DNAREP1_DM LINE Penelope -59 535 251 3 699 27 29 0 0 chr3L 14946052 14946086 -9597471 + AT_rich Low_complexity Low_complexity 1 34 0 3 699 28 48 0 0 chr3L 14946180 14946222 -9597335 + AT_rich Low_complexity Low_complexity 1 42 0 3 699 9374 26 0 4 chr3L 14947521 14948695 -9594862 + TRANSIB2 DNA Transib 1 1169 -1675 3 699 3500 23 5 0 chr3L 14948694 14949132 -9594425 + TRANSIB2 DNA Transib 2405 2844 0 3 699 26 0 0 0 chr3L 14950781 14950807 -9592750 + AT_rich Low_complexity Low_complexity 1 26 0 3 699 360 164 0 0 chr3L 14950813 14950880 -9592677 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 699 22 80 0 0 chr3L 14951056 14951106 -9592451 + AT_rich Low_complexity Low_complexity 1 50 0 3 699 22 0 0 0 chr3L 14951164 14951186 -9592371 + AT_rich Low_complexity Low_complexity 1 22 0 3 699 23 0 0 0 chr3L 14952661 14952684 -9590873 + AT_rich Low_complexity Low_complexity 1 23 0 3 699 25 90 0 0 chr3L 14952752 14952819 -9590738 + AT_rich Low_complexity Low_complexity 1 67 0 3 699 210 153 0 48 chr3L 14954210 14954272 -9589285 + A-rich Low_complexity Low_complexity 6 64 0 3 699 23 0 0 0 chr3L 14955043 14955066 -9588491 + AT_rich Low_complexity Low_complexity 1 23 0 3 699 22 0 0 0 chr3L 14957907 14957929 -9585628 + AT_rich Low_complexity Low_complexity 1 22 0 3 699 21 36 0 0 chr3L 14958692 14958720 -9584837 + AT_rich Low_complexity Low_complexity 1 28 0 3 699 26 30 0 0 chr3L 14961882 14961915 -9581642 + AT_rich Low_complexity Low_complexity 1 33 0 3 699 24 53 0 0 chr3L 14962088 14962126 -9581431 + AT_rich Low_complexity Low_complexity 1 38 0 3 699 22 56 0 0 chr3L 14963830 14963866 -9579691 + AT_rich Low_complexity Low_complexity 1 36 0 3 699 2065 4 0 0 chr3L 14963919 14964164 -9579393 + FW_DM LINE Jockey 4442 4686 -6 3 699 24 0 0 0 chr3L 14964275 14964299 -9579258 + AT_rich Low_complexity Low_complexity 1 24 0 3 699 26 107 0 0 chr3L 14966976 14967079 -9576478 + AT_rich Low_complexity Low_complexity 1 103 0 3 699 21 57 0 0 chr3L 14967092 14967127 -9576430 + AT_rich Low_complexity Low_complexity 1 35 0 3 699 29 28 0 0 chr3L 14967313 14967349 -9576208 + AT_rich Low_complexity Low_complexity 1 36 0 3 699 27 0 0 0 chr3L 14969700 14969727 -9573830 + AT_rich Low_complexity Low_complexity 1 27 0 3 699 203 250 0 0 chr3L 14970817 14970873 -9572684 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 699 27 49 0 0 chr3L 14971420 14971461 -9572096 + AT_rich Low_complexity Low_complexity 1 41 0 3 699 28 61 0 0 chr3L 14978758 14978807 -9564750 + AT_rich Low_complexity Low_complexity 1 49 0 3 699 28 0 0 0 chr3L 14984876 14984904 -9558653 + AT_rich Low_complexity Low_complexity 1 28 0 3 699 22 35 0 0 chr3L 14990799 14990828 -9552729 + AT_rich Low_complexity Low_complexity 1 29 0 3 699 32 0 0 0 chr3L 14994621 14994653 -9548904 + AT_rich Low_complexity Low_complexity 1 32 0 3 699 50 31 0 0 chr3L 14995735 14995799 -9547758 + AT_rich Low_complexity Low_complexity 1 64 0 3 699 180 0 0 0 chr3L 14998648 14998668 -9544889 + (A)n Simple_repeat Simple_repeat 1 20 0 3 699 21 0 0 0 chr3L 15001212 15001233 -9542324 + AT_rich Low_complexity Low_complexity 1 21 0 3 699 21 36 0 0 chr3L 15001724 15001752 -9541805 + AT_rich Low_complexity Low_complexity 1 28 0 3 699 27 29 0 0 chr3L 15002882 15002916 -9540641 + AT_rich Low_complexity Low_complexity 1 34 0 3 699 24 53 0 0 chr3L 15004888 15004926 -9538631 + AT_rich Low_complexity Low_complexity 1 38 0 3 699 29 28 0 0 chr3L 15005417 15005453 -9538104 + AT_rich Low_complexity Low_complexity 1 36 0 3 699 30 0 0 0 chr3L 15005635 15005665 -9537892 + AT_rich Low_complexity Low_complexity 1 30 0 3 699 21 36 0 0 chr3L 15005820 15005848 -9537709 + AT_rich Low_complexity Low_complexity 1 28 0 3 699 21 57 0 0 chr3L 15007314 15007349 -9536208 + AT_rich Low_complexity Low_complexity 1 35 0 3 699 23 33 0 0 chr3L 15007388 15007418 -9536139 + AT_rich Low_complexity Low_complexity 1 30 0 3 699 29 47 0 0 chr3L 15007480 15007523 -9536034 + AT_rich Low_complexity Low_complexity 1 43 0 3 699 189 0 0 0 chr3L 15008919 15008940 -9534617 + (TTA)n Simple_repeat Simple_repeat 2 22 0 3 699 290 115 19 0 chr3L 15009317 15009369 -9534188 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 699 225 94 0 0 chr3L 15009752 15009784 -9533773 + (GAGTG)n Simple_repeat Simple_repeat 2 33 0 3 699 22 0 0 0 chr3L 15010137 15010159 -9533398 + AT_rich Low_complexity Low_complexity 1 22 0 3 699 34 84 0 0 chr3L 15011135 15011218 -9532339 + AT_rich Low_complexity Low_complexity 1 83 0 3 699 186 103 0 0 chr3L 15019044 15019073 -9524484 + (CGGA)n Simple_repeat Simple_repeat 3 31 0 3 699 234 0 0 0 chr3L 15019807 15019833 -9523724 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 699 21 57 0 0 chr3L 15019856 15019891 -9523666 + AT_rich Low_complexity Low_complexity 1 35 0 3 699 25 0 0 0 chr3L 15020027 15020052 -9523505 + AT_rich Low_complexity Low_complexity 1 25 0 3 699 23 0 0 0 chr3L 15022310 15022333 -9521224 + AT_rich Low_complexity Low_complexity 1 23 0 3 699 43 20 0 0 chr3L 15023727 15023777 -9519780 + AT_rich Low_complexity Low_complexity 1 50 0 3 699 183 156 0 0 chr3L 15025019 15025051 -9518506 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 699 210 158 0 0 chr3L 15026778 15026816 -9516741 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 699 27 87 0 0 chr3L 15027574 15027643 -9515914 + AT_rich Low_complexity Low_complexity 1 69 0 3 699 30 0 0 0 chr3L 15029470 15029500 -9514057 + AT_rich Low_complexity Low_complexity 1 30 0 3 699 23 68 0 0 chr3L 15031056 15031100 -9512457 + AT_rich Low_complexity Low_complexity 1 44 0 3 699 467 82 0 14 chr3L 15036695 15036769 -9506788 + (CTG)n Simple_repeat Simple_repeat 1 73 0 3 699 29 60 0 0 chr3L 15037549 15037599 -9505958 + AT_rich Low_complexity Low_complexity 1 50 0 3 699 21 0 0 0 chr3L 15037622 15037643 -9505914 + AT_rich Low_complexity Low_complexity 1 21 0 3 699 21 0 0 0 chr3L 15039920 15039941 -9503616 + AT_rich Low_complexity Low_complexity 1 21 0 3 699 183 129 0 0 chr3L 15040215 15040246 -9503311 + (T)n Simple_repeat Simple_repeat 1 31 0 3 699 22 88 0 0 chr3L 15041050 15041107 -9502450 + AT_rich Low_complexity Low_complexity 1 57 0 3 699 267 200 0 0 chr3L 15045809 15045864 -9497693 - DNAREP1_DM LINE Penelope -538 56 2 3 699 343 143 0 14 chr3L 15049194 15049265 -9494292 + Transib-N1_DM DNA Transib 46 115 -399 3 699 490 53 0 0 chr3L 15049455 15049530 -9494027 + BS LINE Jockey 5020 5094 -32 3 699 39 60 0 0 chr3L 15052036 15052103 -9491454 + AT_rich Low_complexity Low_complexity 1 67 0 3 699 29 0 0 0 chr3L 15054129 15054158 -9489399 + AT_rich Low_complexity Low_complexity 1 29 0 3 699 23 54 0 0 chr3L 15055217 15055254 -9488303 + AT_rich Low_complexity Low_complexity 1 37 0 3 699 29 90 0 0 chr3L 15058395 15058473 -9485084 + AT_rich Low_complexity Low_complexity 1 78 0 3 699 22 56 0 0 chr3L 15063764 15063800 -9479757 + AT_rich Low_complexity Low_complexity 1 36 0 3 699 26 30 0 0 chr3L 15064926 15064959 -9478598 + AT_rich Low_complexity Low_complexity 1 33 0 3 699 32 43 0 0 chr3L 15065135 15065181 -9478376 + AT_rich Low_complexity Low_complexity 1 46 0 3 699 21 0 0 0 chr3L 15066604 15066625 -9476932 + AT_rich Low_complexity Low_complexity 1 21 0 3 699 240 35 0 0 chr3L 15067244 15067273 -9476284 + (TAA)n Simple_repeat Simple_repeat 2 30 0 3 699 42 36 0 0 chr3L 15069884 15069940 -9473617 + AT_rich Low_complexity Low_complexity 1 56 0 3 700 229 326 11 11 chr3L 15077095 15077188 -9466369 + (TCG)n Simple_repeat Simple_repeat 2 94 0 3 700 23 33 0 0 chr3L 15077894 15077924 -9465633 + AT_rich Low_complexity Low_complexity 1 30 0 3 700 9450 28 0 1 chr3L 15078206 15079312 -9464245 + PROTOP_A DNA P 1 1105 0 3 700 30 0 0 0 chr3L 15080186 15080216 -9463341 + AT_rich Low_complexity Low_complexity 1 30 0 3 700 22 70 0 0 chr3L 15082157 15082200 -9461357 + AT_rich Low_complexity Low_complexity 1 43 0 3 700 40 21 0 0 chr3L 15082555 15082602 -9460955 + AT_rich Low_complexity Low_complexity 1 47 0 3 700 31 0 0 0 chr3L 15083920 15083951 -9459606 + AT_rich Low_complexity Low_complexity 1 31 0 3 700 213 222 0 0 chr3L 15086209 15086272 -9457285 + (TTG)n Simple_repeat Simple_repeat 1 63 0 3 700 211 191 28 42 chr3L 15087264 15087335 -9456222 + A-rich Low_complexity Low_complexity 6 75 0 3 700 43 0 0 0 chr3L 15087984 15088027 -9455530 + AT_rich Low_complexity Low_complexity 1 43 0 3 700 23 33 0 0 chr3L 15088118 15088148 -9455409 + AT_rich Low_complexity Low_complexity 1 30 0 3 700 25 83 0 0 chr3L 15090717 15090777 -9452780 + AT_rich Low_complexity Low_complexity 1 60 0 3 700 31 0 0 0 chr3L 15090876 15090907 -9452650 + AT_rich Low_complexity Low_complexity 1 31 0 3 700 27 29 0 0 chr3L 15091975 15092009 -9451548 + AT_rich Low_complexity Low_complexity 1 34 0 3 700 183 156 0 0 chr3L 15095007 15095039 -9448518 + (CTG)n Simple_repeat Simple_repeat 1 32 0 3 700 21 71 0 0 chr3L 15095542 15095584 -9447973 + AT_rich Low_complexity Low_complexity 1 42 0 3 700 22 94 0 0 chr3L 15096629 15096693 -9446864 + AT_rich Low_complexity Low_complexity 1 64 0 3 700 228 174 48 58 chr3L 15098467 15098571 -9444986 + (GCTG)n Simple_repeat Simple_repeat 2 104 0 3 700 217 271 0 0 chr3L 15098789 15098848 -9444709 + G-rich Low_complexity Low_complexity 6 64 0 3 700 324 244 22 11 chr3L 15098858 15098949 -9444608 + (CAG)n Simple_repeat Simple_repeat 3 94 0 3 700 183 100 0 0 chr3L 15100581 15100611 -9442946 + (CTCTG)n Simple_repeat Simple_repeat 5 34 0 3 700 38 68 0 0 chr3L 15102108 15102181 -9441376 + AT_rich Low_complexity Low_complexity 1 73 0 3 700 26 0 0 0 chr3L 15102267 15102293 -9441264 + AT_rich Low_complexity Low_complexity 1 26 0 3 700 21 71 0 0 chr3L 15106025 15106067 -9437490 + AT_rich Low_complexity Low_complexity 1 42 0 3 700 382 154 0 0 chr3L 15107669 15107734 -9435823 - DNAREP1_DM LINE Penelope -1 593 529 3 700 421 174 0 0 chr3L 15107775 15107844 -9435713 - DNAREP1_DM LINE Penelope -525 69 1 3 700 21 36 0 0 chr3L 15109563 15109591 -9433966 + AT_rich Low_complexity Low_complexity 1 28 0 3 700 26 30 0 0 chr3L 15120071 15120104 -9423453 + AT_rich Low_complexity Low_complexity 1 33 0 3 700 36 0 0 0 chr3L 15130178 15130214 -9413343 + AT_rich Low_complexity Low_complexity 1 36 0 3 700 22 35 0 0 chr3L 15133018 15133047 -9410510 + AT_rich Low_complexity Low_complexity 1 29 0 3 700 21 100 0 0 chr3L 15135881 15135951 -9407606 + AT_rich Low_complexity Low_complexity 1 70 0 3 700 33 25 0 0 chr3L 15136069 15136109 -9407448 + AT_rich Low_complexity Low_complexity 1 40 0 3 700 453 86 0 0 chr3L 15139727 15139785 -9403772 - DNAREP1_DM LINE Penelope -535 59 2 3 700 21 0 0 0 chr3L 15140319 15140340 -9403217 + AT_rich Low_complexity Low_complexity 1 21 0 3 700 29 0 0 0 chr3L 15141887 15141916 -9401641 + AT_rich Low_complexity Low_complexity 1 29 0 3 700 25 0 0 0 chr3L 15147452 15147477 -9396080 + AT_rich Low_complexity Low_complexity 1 25 0 3 700 30 45 0 0 chr3L 15154752 15154796 -9388761 + AT_rich Low_complexity Low_complexity 1 44 0 3 700 23 78 0 0 chr3L 15157035 15157086 -9386471 + AT_rich Low_complexity Low_complexity 1 51 0 3 700 243 200 42 14 chr3L 15158151 15158222 -9385335 + (TATATG)n Simple_repeat Simple_repeat 3 75 0 3 700 224 305 0 0 chr3L 15161278 15161337 -9382220 + (CCG)n Simple_repeat Simple_repeat 1 59 0 3 700 41 21 0 0 chr3L 15161517 15161565 -9381992 + AT_rich Low_complexity Low_complexity 1 48 0 3 700 26 0 0 0 chr3L 15161671 15161697 -9381860 + AT_rich Low_complexity Low_complexity 1 26 0 3 700 273 57 0 0 chr3L 15162089 15162124 -9381433 + (CAACT)n Simple_repeat Simple_repeat 2 36 0 3 700 252 0 0 0 chr3L 15162290 15162318 -9381239 + (CAGT)n Simple_repeat Simple_repeat 3 30 0 3 700 229 0 83 0 chr3L 15163038 15163074 -9380483 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 3 700 484 139 0 0 chr3L 15165645 15165724 -9377833 - DNAREP1_DM LINE Penelope -155 439 361 3 700 327 154 0 0 chr3L 15165779 15165831 -9377726 - DNAREP1_DM LINE Penelope -535 59 8 3 700 23 78 0 0 chr3L 15167305 15167356 -9376201 + AT_rich Low_complexity Low_complexity 1 51 0 3 700 28 86 0 0 chr3L 15168024 15168094 -9375463 + AT_rich Low_complexity Low_complexity 1 70 0 3 700 231 184 0 0 chr3L 15168430 15168468 -9375089 + (TTGGGG)n Simple_repeat Simple_repeat 4 41 0 3 700 228 176 13 63 chr3L 15168555 15168634 -9374923 + (TTG)n Simple_repeat Simple_repeat 1 75 0 3 700 22 0 0 0 chr3L 15169248 15169270 -9374287 + AT_rich Low_complexity Low_complexity 1 22 0 3 700 23 0 0 0 chr3L 15170432 15170455 -9373102 + AT_rich Low_complexity Low_complexity 1 23 0 3 700 195 42 0 0 chr3L 15171920 15171944 -9371613 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 700 23 0 0 0 chr3L 15172638 15172661 -9370896 + AT_rich Low_complexity Low_complexity 1 23 0 3 700 24 49 0 47 chr3L 15177864 15177928 -9365629 + AT_rich Low_complexity Low_complexity 1 61 0 3 700 206 150 0 24 chr3L 15178525 15178566 -9364991 + (GTTTG)n Simple_repeat Simple_repeat 2 41 0 3 700 24 0 0 0 chr3L 15179089 15179113 -9364444 + AT_rich Low_complexity Low_complexity 1 24 0 3 700 201 167 0 0 chr3L 15179712 15179748 -9363809 + T-rich Low_complexity Low_complexity 1 36 0 3 700 24 53 0 0 chr3L 15182136 15182174 -9361383 + AT_rich Low_complexity Low_complexity 1 38 0 3 700 25 0 0 0 chr3L 15184166 15184191 -9359366 + AT_rich Low_complexity Low_complexity 1 25 0 3 700 23 0 0 0 chr3L 15184776 15184799 -9358758 + AT_rich Low_complexity Low_complexity 1 23 0 3 700 21 36 0 0 chr3L 15190012 15190040 -9353517 + AT_rich Low_complexity Low_complexity 1 28 0 3 700 198 118 0 0 chr3L 15190490 15190524 -9353033 + (GATTG)n Simple_repeat Simple_repeat 4 37 0 3 700 180 179 0 0 chr3L 15191181 15191220 -9352337 + (GAATG)n Simple_repeat Simple_repeat 5 43 0 3 700 182 150 0 24 chr3L 15192934 15192975 -9350582 + (TTG)n Simple_repeat Simple_repeat 2 41 0 3 700 203 189 0 0 chr3L 15193098 15193135 -9350422 + T-rich Low_complexity Low_complexity 1 37 0 3 700 24 0 0 0 chr3L 15197075 15197099 -9346458 + AT_rich Low_complexity Low_complexity 1 24 0 3 700 23 33 0 0 chr3L 15197441 15197471 -9346086 + AT_rich Low_complexity Low_complexity 1 30 0 3 700 207 69 0 0 chr3L 15199453 15199482 -9344075 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 3 700 23 0 0 0 chr3L 15200429 15200452 -9343105 + AT_rich Low_complexity Low_complexity 1 23 0 3 700 25 0 0 0 chr3L 15202357 15202382 -9341175 + AT_rich Low_complexity Low_complexity 1 25 0 3 700 24 0 0 0 chr3L 15203227 15203251 -9340306 + AT_rich Low_complexity Low_complexity 1 24 0 3 700 34 79 0 0 chr3L 15204099 15204175 -9339382 + AT_rich Low_complexity Low_complexity 1 76 0 3 701 534 146 0 0 chr3L 15205058 15205154 -9338403 + (CAA)n Simple_repeat Simple_repeat 1 96 0 3 701 27 0 0 0 chr3L 15207989 15208016 -9335541 + AT_rich Low_complexity Low_complexity 1 27 0 3 701 256 167 0 115 chr3L 15210520 15210642 -9332915 + ROO_I LTR Pao 633 740 -7516 3 701 26 0 0 0 chr3L 15212190 15212216 -9331341 + AT_rich Low_complexity Low_complexity 1 26 0 3 701 228 100 0 0 chr3L 15213308 15213348 -9330209 + (GATTG)n Simple_repeat Simple_repeat 1 40 0 3 701 24 32 0 0 chr3L 15215150 15215181 -9328376 + AT_rich Low_complexity Low_complexity 1 31 0 3 701 21 71 0 0 chr3L 15215999 15216041 -9327516 + AT_rich Low_complexity Low_complexity 1 42 0 3 701 243 103 0 0 chr3L 15216740 15216779 -9326778 + (TTCTCC)n Simple_repeat Simple_repeat 6 44 0 3 701 195 242 0 0 chr3L 15218354 15218416 -9325141 + (CAA)n Simple_repeat Simple_repeat 1 62 0 3 701 277 145 26 0 chr3L 15218569 15218645 -9324912 + (CATCC)n Simple_repeat Simple_repeat 2 79 0 3 701 264 100 0 0 chr3L 15218714 15218754 -9324803 + (ATGTG)n Simple_repeat Simple_repeat 3 42 0 3 701 31 68 0 0 chr3L 15219618 15219677 -9323880 + AT_rich Low_complexity Low_complexity 1 59 0 3 701 369 143 0 35 chr3L 15219878 15219965 -9323592 - ROO_I LTR Pao -7517 739 656 3 701 218 179 0 18 chr3L 15220038 15220095 -9323462 + (CAG)n Simple_repeat Simple_repeat 3 58 0 3 701 21 0 0 0 chr3L 15220455 15220476 -9323081 + AT_rich Low_complexity Low_complexity 1 21 0 3 701 189 0 0 0 chr3L 15220503 15220524 -9323033 + (CAGGC)n Simple_repeat Simple_repeat 3 23 0 3 701 210 91 0 0 chr3L 15220961 15220994 -9322563 + (A)n Simple_repeat Simple_repeat 1 33 0 3 701 270 116 0 0 chr3L 15223083 15223126 -9320431 + (CTG)n Simple_repeat Simple_repeat 2 44 0 3 701 22 0 0 0 chr3L 15224363 15224385 -9319172 + AT_rich Low_complexity Low_complexity 1 22 0 3 701 25 65 0 0 chr3L 15225706 15225752 -9317805 + AT_rich Low_complexity Low_complexity 1 46 0 3 701 264 143 0 0 chr3L 15226239 15226295 -9317262 + (CATCC)n Simple_repeat Simple_repeat 5 60 0 3 701 45 34 0 0 chr3L 15228001 15228060 -9315497 + AT_rich Low_complexity Low_complexity 1 59 0 3 701 243 231 0 0 chr3L 15228609 15228661 -9314896 + (CTCA)n Simple_repeat Simple_repeat 1 52 0 3 701 239 244 0 62 chr3L 15233024 15233120 -9310437 + ROO_I LTR Pao 632 721 -7535 3 701 22 0 0 0 chr3L 15233944 15233966 -9309591 + AT_rich Low_complexity Low_complexity 1 22 0 3 701 23 33 0 0 chr3L 15235749 15235779 -9307778 + AT_rich Low_complexity Low_complexity 1 30 0 3 701 234 128 0 0 chr3L 15239307 15239346 -9304211 + (CACCAT)n Simple_repeat Simple_repeat 3 41 0 3 701 243 122 0 0 chr3L 15240554 15240603 -9302954 + (CATCC)n Simple_repeat Simple_repeat 2 50 0 3 701 211 197 15 29 chr3L 15242105 15242173 -9301384 + (TTAGGC)n Simple_repeat Simple_repeat 1 67 0 3 701 186 133 0 0 chr3L 15242661 15242691 -9300866 + (GATTG)n Simple_repeat Simple_repeat 1 30 0 3 701 26 0 0 0 chr3L 15242699 15242725 -9300832 + AT_rich Low_complexity Low_complexity 1 26 0 3 701 189 107 0 0 chr3L 15242783 15242811 -9300746 + (ATTCG)n Simple_repeat Simple_repeat 3 30 0 3 701 26 0 0 0 chr3L 15243135 15243161 -9300396 + AT_rich Low_complexity Low_complexity 1 26 0 3 701 234 81 0 0 chr3L 15243720 15243757 -9299800 + (T)n Simple_repeat Simple_repeat 1 37 0 3 701 200 222 0 0 chr3L 15248998 15249043 -9294514 + T-rich Low_complexity Low_complexity 1 45 0 3 701 24 32 0 0 chr3L 15249657 15249688 -9293869 + AT_rich Low_complexity Low_complexity 1 31 0 3 701 22 0 0 0 chr3L 15250507 15250529 -9293028 + AT_rich Low_complexity Low_complexity 1 22 0 3 701 282 73 0 0 chr3L 15251317 15251358 -9292199 + (CAA)n Simple_repeat Simple_repeat 1 41 0 3 701 33 0 0 0 chr3L 15257090 15257123 -9286434 + AT_rich Low_complexity Low_complexity 1 33 0 3 701 30 0 0 0 chr3L 15257886 15257916 -9285641 + AT_rich Low_complexity Low_complexity 1 30 0 3 701 182 183 0 32 chr3L 15258163 15258225 -9285332 + (CAG)n Simple_repeat Simple_repeat 3 62 0 3 701 234 128 0 0 chr3L 15258234 15258273 -9285284 + (TCG)n Simple_repeat Simple_repeat 1 39 0 3 701 25 0 0 0 chr3L 15259939 15259964 -9283593 + AT_rich Low_complexity Low_complexity 1 25 0 3 701 26 30 0 0 chr3L 15260726 15260759 -9282798 + AT_rich Low_complexity Low_complexity 1 33 0 3 701 24 0 0 0 chr3L 15261432 15261456 -9282101 + AT_rich Low_complexity Low_complexity 1 24 0 3 701 30 45 0 0 chr3L 15263291 15263335 -9280222 + AT_rich Low_complexity Low_complexity 1 44 0 3 701 246 81 0 0 chr3L 15265879 15265916 -9277641 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 701 27 0 0 0 chr3L 15268643 15268670 -9274887 + AT_rich Low_complexity Low_complexity 1 27 0 3 701 231 61 0 0 chr3L 15269010 15269043 -9274514 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 701 195 170 0 0 chr3L 15269153 15269200 -9274357 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 701 27 62 0 0 chr3L 15273800 15273848 -9269709 + AT_rich Low_complexity Low_complexity 1 48 0 3 701 204 77 103 0 chr3L 15274852 15274891 -9268666 + (CTTA)n Simple_repeat Simple_repeat 4 46 0 3 701 37 0 0 0 chr3L 15274929 15274966 -9268591 + AT_rich Low_complexity Low_complexity 1 37 0 3 701 237 65 0 0 chr3L 15275890 15275921 -9267636 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 701 24 0 0 0 chr3L 15277933 15277957 -9265600 + AT_rich Low_complexity Low_complexity 1 24 0 3 701 29 70 0 0 chr3L 15280336 15280393 -9263164 + AT_rich Low_complexity Low_complexity 1 57 0 3 701 23 0 0 0 chr3L 15281563 15281586 -9261971 + AT_rich Low_complexity Low_complexity 1 23 0 3 701 25 0 0 0 chr3L 15283224 15283249 -9260308 + AT_rich Low_complexity Low_complexity 1 25 0 3 701 22 70 0 0 chr3L 15284061 15284104 -9259453 + AT_rich Low_complexity Low_complexity 1 43 0 3 701 3892 7 0 0 chr3L 15288922 15289352 -9254205 - Gypsy5_LTR LTR Gypsy 0 430 1 3 701 8893 7 11 0 chr3L 15289352 15290375 -9253182 - Gypsy5_I LTR Gypsy 0 6509 5506 3 701 22 0 0 0 chr3L 15290951 15290973 -9252584 + AT_rich Low_complexity Low_complexity 1 22 0 3 701 439 20 0 0 chr3L 15291229 15291278 -9252279 - Gypsy5_I LTR Gypsy -6460 49 1 3 701 3892 7 0 0 chr3L 15291278 15291708 -9251849 - Gypsy5_LTR LTR Gypsy 0 430 1 3 701 28 48 0 0 chr3L 15296506 15296548 -9247009 + AT_rich Low_complexity Low_complexity 1 42 0 3 701 44 46 0 0 chr3L 15298163 15298228 -9245329 + AT_rich Low_complexity Low_complexity 1 65 0 3 701 27 49 0 0 chr3L 15300351 15300392 -9243165 + AT_rich Low_complexity Low_complexity 1 41 0 3 701 25 75 0 0 chr3L 15304680 15304733 -9238824 + AT_rich Low_complexity Low_complexity 1 53 0 3 701 24 0 0 0 chr3L 15307132 15307156 -9236401 + AT_rich Low_complexity Low_complexity 1 24 0 3 701 48 32 0 0 chr3L 15310713 15310775 -9232782 + AT_rich Low_complexity Low_complexity 1 62 0 3 701 22 70 0 0 chr3L 15311264 15311307 -9232250 + AT_rich Low_complexity Low_complexity 1 43 0 3 701 21 0 0 0 chr3L 15311325 15311346 -9232211 + AT_rich Low_complexity Low_complexity 1 21 0 3 701 27 29 0 0 chr3L 15312011 15312045 -9231512 + AT_rich Low_complexity Low_complexity 1 34 0 3 701 22 80 0 0 chr3L 15316985 15317035 -9226522 + AT_rich Low_complexity Low_complexity 1 50 0 3 701 207 0 0 0 chr3L 15317536 15317559 -9225998 + (A)n Simple_repeat Simple_repeat 1 23 0 3 701 28 0 0 0 chr3L 15319864 15319892 -9223665 + AT_rich Low_complexity Low_complexity 1 28 0 3 701 22 0 0 0 chr3L 15320038 15320060 -9223497 + AT_rich Low_complexity Low_complexity 1 22 0 3 701 21 0 0 0 chr3L 15322641 15322662 -9220895 + AT_rich Low_complexity Low_complexity 1 21 0 3 701 21 0 0 0 chr3L 15323465 15323486 -9220071 + AT_rich Low_complexity Low_complexity 1 21 0 3 701 24 67 0 0 chr3L 15324394 15324439 -9219118 + AT_rich Low_complexity Low_complexity 1 45 0 3 701 22 35 0 0 chr3L 15329208 15329237 -9214320 + AT_rich Low_complexity Low_complexity 1 29 0 3 701 23 0 0 0 chr3L 15335070 15335093 -9208464 + AT_rich Low_complexity Low_complexity 1 23 0 3 701 29 47 0 0 chr3L 15335207 15335250 -9208307 + AT_rich Low_complexity Low_complexity 1 43 0 3 702 359 106 15 0 chr3L 15335663 15335729 -9207828 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 702 24 67 0 0 chr3L 15336542 15336587 -9206970 + AT_rich Low_complexity Low_complexity 1 45 0 3 702 25 75 0 0 chr3L 15340381 15340434 -9203123 + AT_rich Low_complexity Low_complexity 1 53 0 3 702 260 175 16 0 chr3L 15340866 15340929 -9202628 + (TTTG)n Simple_repeat Simple_repeat 2 65 0 3 702 25 0 0 0 chr3L 15341286 15341311 -9202246 + AT_rich Low_complexity Low_complexity 1 25 0 3 702 30 69 0 0 chr3L 15342687 15342745 -9200812 + AT_rich Low_complexity Low_complexity 1 58 0 3 702 226 148 65 16 chr3L 15343068 15343130 -9200427 + (TTTAA)n Simple_repeat Simple_repeat 3 67 0 3 702 22 0 0 0 chr3L 15343322 15343344 -9200213 + AT_rich Low_complexity Low_complexity 1 22 0 3 702 28 29 0 0 chr3L 15343393 15343428 -9200129 + AT_rich Low_complexity Low_complexity 1 35 0 3 702 22 70 0 0 chr3L 15346412 15346455 -9197102 + AT_rich Low_complexity Low_complexity 1 43 0 3 702 23 0 0 0 chr3L 15347751 15347774 -9195783 + AT_rich Low_complexity Low_complexity 1 23 0 3 702 23 0 0 0 chr3L 15348389 15348412 -9195145 + AT_rich Low_complexity Low_complexity 1 23 0 3 702 29 0 0 0 chr3L 15349284 15349313 -9194244 + AT_rich Low_complexity Low_complexity 1 29 0 3 702 21 36 0 0 chr3L 15350285 15350313 -9193244 + AT_rich Low_complexity Low_complexity 1 28 0 3 702 22 35 0 0 chr3L 15352570 15352599 -9190958 + AT_rich Low_complexity Low_complexity 1 29 0 3 702 205 171 0 0 chr3L 15354752 15354787 -9188770 + (CACCAT)n Simple_repeat Simple_repeat 4 38 0 3 702 225 229 14 14 chr3L 15355452 15355523 -9188034 + A-rich Low_complexity Low_complexity 1 71 0 3 702 198 220 0 0 chr3L 15357226 15357285 -9186272 + (GTTTG)n Simple_repeat Simple_repeat 2 60 0 3 702 27 0 0 0 chr3L 15359198 15359225 -9184332 + AT_rich Low_complexity Low_complexity 1 27 0 3 702 27 29 0 0 chr3L 15360591 15360625 -9182932 + AT_rich Low_complexity Low_complexity 1 34 0 3 702 22 56 0 0 chr3L 15362522 15362558 -9180999 + AT_rich Low_complexity Low_complexity 1 36 0 3 702 24 0 0 0 chr3L 15366865 15366889 -9176668 + AT_rich Low_complexity Low_complexity 1 24 0 3 702 28 0 0 0 chr3L 15368792 15368820 -9174737 + AT_rich Low_complexity Low_complexity 1 28 0 3 702 263 207 56 22 chr3L 15369293 15369382 -9174175 + (CAG)n Simple_repeat Simple_repeat 1 92 0 3 702 28 61 0 0 chr3L 15370271 15370320 -9173237 + AT_rich Low_complexity Low_complexity 1 49 0 3 702 246 136 0 0 chr3L 15371456 15371500 -9172057 + (CAT)n Simple_repeat Simple_repeat 3 46 0 3 702 32 26 0 0 chr3L 15372914 15372953 -9170604 + AT_rich Low_complexity Low_complexity 1 39 0 3 702 24 67 0 0 chr3L 15374219 15374264 -9169293 + AT_rich Low_complexity Low_complexity 1 45 0 3 702 31 92 0 0 chr3L 15375368 15375455 -9168102 + AT_rich Low_complexity Low_complexity 1 87 0 3 702 30 45 0 0 chr3L 15375477 15375521 -9168036 + AT_rich Low_complexity Low_complexity 1 44 0 3 702 48 43 0 0 chr3L 15376037 15376106 -9167451 + AT_rich Low_complexity Low_complexity 1 69 0 3 702 21 0 0 0 chr3L 15379210 15379231 -9164326 + AT_rich Low_complexity Low_complexity 1 21 0 3 702 25 0 0 0 chr3L 15381515 15381540 -9162017 + AT_rich Low_complexity Low_complexity 1 25 0 3 702 21 0 0 0 chr3L 15382317 15382338 -9161219 + AT_rich Low_complexity Low_complexity 1 21 0 3 702 234 0 0 0 chr3L 15384592 15384618 -9158939 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 702 26 0 0 0 chr3L 15386213 15386239 -9157318 + AT_rich Low_complexity Low_complexity 1 26 0 3 702 29 28 0 0 chr3L 15386872 15386908 -9156649 + AT_rich Low_complexity Low_complexity 1 36 0 3 702 21 57 0 0 chr3L 15388000 15388035 -9155522 + AT_rich Low_complexity Low_complexity 1 35 0 3 702 197 140 0 23 chr3L 15390307 15390351 -9153206 + (TTAA)n Simple_repeat Simple_repeat 1 43 0 3 702 30 27 0 0 chr3L 15394629 15394666 -9148891 + AT_rich Low_complexity Low_complexity 1 37 0 3 702 21 0 0 0 chr3L 15398335 15398356 -9145201 + AT_rich Low_complexity Low_complexity 1 21 0 3 702 56 29 0 0 chr3L 15398894 15398964 -9144593 + AT_rich Low_complexity Low_complexity 1 70 0 3 702 24 0 0 0 chr3L 15402198 15402222 -9141335 + AT_rich Low_complexity Low_complexity 1 24 0 3 702 26 0 0 0 chr3L 15403761 15403787 -9139770 + AT_rich Low_complexity Low_complexity 1 26 0 3 702 203 250 0 0 chr3L 15404181 15404237 -9139320 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 702 22 0 0 0 chr3L 15405140 15405162 -9138395 + AT_rich Low_complexity Low_complexity 1 22 0 3 702 27 0 0 0 chr3L 15407023 15407050 -9136507 + AT_rich Low_complexity Low_complexity 1 27 0 3 702 22 88 0 0 chr3L 15407519 15407576 -9135981 + AT_rich Low_complexity Low_complexity 1 57 0 3 702 26 30 0 0 chr3L 15408397 15408430 -9135127 + AT_rich Low_complexity Low_complexity 1 33 0 3 702 48 72 0 0 chr3L 15410024 15410121 -9133436 + AT_rich Low_complexity Low_complexity 1 97 0 3 702 336 191 0 0 chr3L 15412455 15412544 -9131013 + (CAG)n Simple_repeat Simple_repeat 3 91 0 3 702 27 0 0 0 chr3L 15412804 15412831 -9130726 + AT_rich Low_complexity Low_complexity 1 27 0 3 702 30 45 0 0 chr3L 15413452 15413496 -9130061 + AT_rich Low_complexity Low_complexity 1 44 0 3 702 23 54 0 0 chr3L 15413946 15413983 -9129574 + AT_rich Low_complexity Low_complexity 1 37 0 3 702 231 36 0 0 chr3L 15415087 15415115 -9128442 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 702 38 61 0 0 chr3L 15415482 15415548 -9128009 + AT_rich Low_complexity Low_complexity 1 66 0 3 702 222 105 0 0 chr3L 15416607 15416645 -9126912 + (ATTCG)n Simple_repeat Simple_repeat 5 42 0 3 702 3506 14 0 0 chr3L 15416905 15417320 -9126237 + NOMAD_LTR LTR Gypsy 104 518 0 3 702 10840 1 0 1 chr3L 15417320 15418572 -9124985 + NOMAD_I LTR Gypsy 1 1251 -5321 3 702 5438 0 0 0 chr3L 15418564 15419184 -9124373 + NOMAD_I LTR Gypsy 5953 6572 0 3 702 4495 4 0 0 chr3L 15419184 15419702 -9123855 + NOMAD_LTR LTR Gypsy 1 518 0 3 702 25 65 0 0 chr3L 15419773 15419819 -9123738 + AT_rich Low_complexity Low_complexity 1 46 0 3 702 21 36 0 0 chr3L 15423382 15423410 -9120147 + AT_rich Low_complexity Low_complexity 1 28 0 3 702 24 0 0 0 chr3L 15423866 15423890 -9119667 + AT_rich Low_complexity Low_complexity 1 24 0 3 702 34 0 0 0 chr3L 15424827 15424861 -9118696 + AT_rich Low_complexity Low_complexity 1 34 0 3 702 22 56 0 0 chr3L 15425371 15425407 -9118150 + AT_rich Low_complexity Low_complexity 1 36 0 3 702 27 29 0 0 chr3L 15427179 15427213 -9116344 + AT_rich Low_complexity Low_complexity 1 34 0 3 702 25 0 0 0 chr3L 15427820 15427845 -9115712 + AT_rich Low_complexity Low_complexity 1 25 0 3 702 24 0 0 0 chr3L 15429670 15429694 -9113863 + AT_rich Low_complexity Low_complexity 1 24 0 3 702 27 49 0 0 chr3L 15430100 15430141 -9113416 + AT_rich Low_complexity Low_complexity 1 41 0 3 702 22 0 0 0 chr3L 15432539 15432561 -9110996 + AT_rich Low_complexity Low_complexity 1 22 0 3 702 34 42 0 0 chr3L 15433847 15433895 -9109662 + AT_rich Low_complexity Low_complexity 1 48 0 3 702 227 217 0 0 chr3L 15435055 15435101 -9108456 + A-rich Low_complexity Low_complexity 1 46 0 3 702 33 80 0 0 chr3L 15438445 15438520 -9105037 + AT_rich Low_complexity Low_complexity 1 75 0 3 702 22 56 0 0 chr3L 15440142 15440178 -9103379 + AT_rich Low_complexity Low_complexity 1 36 0 3 702 21 0 0 0 chr3L 15440728 15440749 -9102808 + AT_rich Low_complexity Low_complexity 1 21 0 3 702 21 57 0 0 chr3L 15441503 15441538 -9102019 + AT_rich Low_complexity Low_complexity 1 35 0 3 702 27 29 0 0 chr3L 15446077 15446111 -9097446 + AT_rich Low_complexity Low_complexity 1 34 0 3 702 23 0 0 0 chr3L 15449027 15449050 -9094507 + AT_rich Low_complexity Low_complexity 1 23 0 3 702 26 0 0 0 chr3L 15449286 15449312 -9094245 + AT_rich Low_complexity Low_complexity 1 26 0 3 702 31 44 0 0 chr3L 15449384 15449429 -9094128 + AT_rich Low_complexity Low_complexity 1 45 0 3 702 30 45 0 0 chr3L 15451604 15451648 -9091909 + AT_rich Low_complexity Low_complexity 1 44 0 3 702 23 33 0 0 chr3L 15453388 15453418 -9090139 + AT_rich Low_complexity Low_complexity 1 30 0 3 702 32 81 0 0 chr3L 15453952 15454026 -9089531 + AT_rich Low_complexity Low_complexity 1 74 0 3 702 25 0 0 0 chr3L 15454091 15454116 -9089441 + AT_rich Low_complexity Low_complexity 1 25 0 3 702 22 35 0 0 chr3L 15454514 15454543 -9089014 + AT_rich Low_complexity Low_complexity 1 29 0 3 702 26 0 0 0 chr3L 15454677 15454703 -9088854 + AT_rich Low_complexity Low_complexity 1 26 0 3 702 30 59 0 0 chr3L 15458617 15458668 -9084889 + AT_rich Low_complexity Low_complexity 1 51 0 3 702 22 0 0 0 chr3L 15464457 15464479 -9079078 + AT_rich Low_complexity Low_complexity 1 22 0 3 702 300 223 0 0 chr3L 15465327 15465430 -9078127 + (TATG)n Simple_repeat Simple_repeat 3 105 0 3 702 399 226 0 0 chr3L 15465455 15465588 -9077969 + (TATG)n Simple_repeat Simple_repeat 1 133 0 3 703 39 80 0 0 chr3L 15470333 15470421 -9073136 + AT_rich Low_complexity Low_complexity 1 88 0 3 703 21 0 0 0 chr3L 15470478 15470499 -9073058 + AT_rich Low_complexity Low_complexity 1 21 0 3 703 28 29 0 0 chr3L 15470541 15470576 -9072981 + AT_rich Low_complexity Low_complexity 1 35 0 3 703 35 83 0 0 chr3L 15470634 15470718 -9072839 + AT_rich Low_complexity Low_complexity 1 84 0 3 703 21 36 0 0 chr3L 15472005 15472033 -9071524 + AT_rich Low_complexity Low_complexity 1 28 0 3 703 24 91 0 0 chr3L 15472876 15472942 -9070615 + AT_rich Low_complexity Low_complexity 1 66 0 3 703 21 0 0 0 chr3L 15474750 15474771 -9068786 + AT_rich Low_complexity Low_complexity 1 21 0 3 703 23 54 0 0 chr3L 15474986 15475023 -9068534 + AT_rich Low_complexity Low_complexity 1 37 0 3 703 33 0 0 0 chr3L 15476681 15476714 -9066843 + AT_rich Low_complexity Low_complexity 1 33 0 3 703 227 235 0 56 chr3L 15477033 15477123 -9066434 - ROO_I LTR Pao -7531 725 641 3 703 25 31 0 0 chr3L 15477467 15477499 -9066058 + AT_rich Low_complexity Low_complexity 1 32 0 3 703 34 55 0 0 chr3L 15478690 15478745 -9064812 + AT_rich Low_complexity Low_complexity 1 55 0 3 703 231 114 0 0 chr3L 15479898 15479933 -9063624 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 703 28 0 0 0 chr3L 15481292 15481320 -9062237 + AT_rich Low_complexity Low_complexity 1 28 0 3 703 25 0 0 0 chr3L 15483367 15483392 -9060165 + AT_rich Low_complexity Low_complexity 1 25 0 3 703 194 91 0 29 chr3L 15483810 15483844 -9059713 + (CGGA)n Simple_repeat Simple_repeat 1 33 0 3 703 24 32 0 0 chr3L 15483936 15483967 -9059590 + AT_rich Low_complexity Low_complexity 1 31 0 3 703 23 0 0 0 chr3L 15484141 15484164 -9059393 + AT_rich Low_complexity Low_complexity 1 23 0 3 703 259 281 0 11 chr3L 15485857 15485947 -9057610 + (CA)n Simple_repeat Simple_repeat 2 90 0 3 703 22 35 0 0 chr3L 15486508 15486537 -9057020 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 26 50 0 0 chr3L 15488752 15488792 -9054765 + AT_rich Low_complexity Low_complexity 1 40 0 3 703 195 217 0 0 chr3L 15500751 15500811 -9042746 + GA-rich Low_complexity Low_complexity 2 61 0 3 703 23 0 0 0 chr3L 15501780 15501803 -9041754 + AT_rich Low_complexity Low_complexity 1 23 0 3 703 23 0 0 0 chr3L 15504380 15504403 -9039154 + AT_rich Low_complexity Low_complexity 1 23 0 3 703 189 0 0 0 chr3L 15505247 15505268 -9038289 + (TTC)n Simple_repeat Simple_repeat 1 21 0 3 703 32 0 0 0 chr3L 15506262 15506294 -9037263 + AT_rich Low_complexity Low_complexity 1 32 0 3 703 29 0 0 0 chr3L 15506691 15506720 -9036837 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 23 0 0 0 chr3L 15506733 15506756 -9036801 + AT_rich Low_complexity Low_complexity 1 23 0 3 703 223 208 19 0 chr3L 15508208 15508261 -9035296 + (TATG)n Simple_repeat Simple_repeat 3 56 0 3 703 23 54 0 0 chr3L 15509253 15509290 -9034267 + AT_rich Low_complexity Low_complexity 1 37 0 3 703 235 49 0 47 chr3L 15509557 15509600 -9033957 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 703 23 33 0 0 chr3L 15511336 15511366 -9032191 + AT_rich Low_complexity Low_complexity 1 30 0 3 703 22 35 0 0 chr3L 15512501 15512530 -9031027 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 22 35 0 0 chr3L 15513077 15513106 -9030451 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 28 0 0 0 chr3L 15514759 15514787 -9028770 + AT_rich Low_complexity Low_complexity 1 28 0 3 703 31 44 0 0 chr3L 15518978 15519023 -9024534 + AT_rich Low_complexity Low_complexity 1 45 0 3 703 25 31 0 0 chr3L 15519233 15519265 -9024292 + AT_rich Low_complexity Low_complexity 1 32 0 3 703 26 0 0 0 chr3L 15523648 15523674 -9019883 + AT_rich Low_complexity Low_complexity 1 26 0 3 703 29 0 0 0 chr3L 15525406 15525435 -9018122 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 34 42 0 0 chr3L 15526168 15526216 -9017341 + AT_rich Low_complexity Low_complexity 1 48 0 3 703 315 71 0 0 chr3L 15527222 15527264 -9016293 + (CAG)n Simple_repeat Simple_repeat 3 44 0 3 703 22 35 0 0 chr3L 15528259 15528288 -9015269 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 205 167 0 0 chr3L 15528351 15528387 -9015170 + GA-rich Low_complexity Low_complexity 2 37 0 3 703 208 260 20 40 chr3L 15529185 15529285 -9014272 + GA-rich Low_complexity Low_complexity 1 98 0 3 703 29 0 0 0 chr3L 15532138 15532167 -9011390 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 377 39 0 19 chr3L 15534073 15534125 -9009432 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 703 22 80 0 0 chr3L 15535169 15535219 -9008338 + AT_rich Low_complexity Low_complexity 1 50 0 3 703 204 67 0 0 chr3L 15536634 15536664 -9006893 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 3 703 211 73 23 47 chr3L 15537144 15537187 -9006370 + (CACAC)n Simple_repeat Simple_repeat 3 44 0 3 703 203 254 17 0 chr3L 15537975 15538034 -9005523 + (CATA)n Simple_repeat Simple_repeat 4 63 0 3 703 198 0 0 0 chr3L 15538195 15538217 -9005340 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 703 27 29 0 0 chr3L 15538861 15538895 -9004662 + AT_rich Low_complexity Low_complexity 1 34 0 3 703 243 170 0 0 chr3L 15539426 15539473 -9004084 + (TATG)n Simple_repeat Simple_repeat 2 48 0 3 703 207 0 0 0 chr3L 15539617 15539640 -9003917 + (CAGA)n Simple_repeat Simple_repeat 1 23 0 3 703 222 118 0 0 chr3L 15540627 15540661 -9002896 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 703 21 0 0 0 chr3L 15541452 15541473 -9002084 + AT_rich Low_complexity Low_complexity 1 21 0 3 703 21 0 0 0 chr3L 15542405 15542426 -9001131 + AT_rich Low_complexity Low_complexity 1 21 0 3 703 25 31 0 0 chr3L 15543194 15543226 -9000331 + AT_rich Low_complexity Low_complexity 1 32 0 3 703 192 97 0 0 chr3L 15544485 15544516 -8999041 + (CAGTT)n Simple_repeat Simple_repeat 5 35 0 3 703 229 276 0 30 chr3L 15544933 15545034 -8998523 + A-rich Low_complexity Low_complexity 4 101 0 3 703 30 45 0 0 chr3L 15546465 15546509 -8997048 + AT_rich Low_complexity Low_complexity 1 44 0 3 703 1267 200 154 76 chr3L 15546521 15546960 -8996597 + DNAREP1_DM LINE Penelope 27 505 -89 3 703 202 29 57 0 chr3L 15546960 15546995 -8996562 + (TATAA)n Simple_repeat Simple_repeat 5 41 0 3 703 1267 200 154 76 chr3L 15546995 15547081 -8996476 + DNAREP1_DM LINE Penelope 506 592 -2 3 703 246 240 0 0 chr3L 15547432 15547536 -8996021 + ROO_I LTR Pao 640 743 -7513 3 703 189 121 0 0 chr3L 15547538 15547571 -8995986 + (CAA)n Simple_repeat Simple_repeat 1 33 0 3 703 11633 91 3 1 chr3L 15548073 15549805 -8993752 + S_DM DNA Tc1 1 1736 0 3 703 22 0 0 0 chr3L 15553282 15553304 -8990253 + AT_rich Low_complexity Low_complexity 1 22 0 3 703 21 36 0 0 chr3L 15553846 15553874 -8989683 + AT_rich Low_complexity Low_complexity 1 28 0 3 703 23 0 0 0 chr3L 15554098 15554121 -8989436 + AT_rich Low_complexity Low_complexity 1 23 0 3 703 23 33 0 0 chr3L 15556388 15556418 -8987139 + AT_rich Low_complexity Low_complexity 1 30 0 3 703 27 0 0 0 chr3L 15556438 15556465 -8987092 + AT_rich Low_complexity Low_complexity 1 27 0 3 703 21 0 0 0 chr3L 15557228 15557249 -8986308 + AT_rich Low_complexity Low_complexity 1 21 0 3 703 23 0 0 0 chr3L 15558787 15558810 -8984747 + AT_rich Low_complexity Low_complexity 1 23 0 3 703 186 143 0 0 chr3L 15559444 15559479 -8984078 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 703 201 74 0 0 chr3L 15559957 15559984 -8983573 + (CTCTG)n Simple_repeat Simple_repeat 3 29 0 3 703 23 0 0 0 chr3L 15565998 15566021 -8977536 + AT_rich Low_complexity Low_complexity 1 23 0 3 703 25 0 0 0 chr3L 15569374 15569399 -8974158 + AT_rich Low_complexity Low_complexity 1 25 0 3 703 21 0 0 0 chr3L 15578840 15578861 -8964696 + AT_rich Low_complexity Low_complexity 1 21 0 3 703 242 228 0 0 chr3L 15579440 15579497 -8964060 + (CAT)n Simple_repeat Simple_repeat 3 59 0 3 703 28 29 0 0 chr3L 15582386 15582421 -8961136 + AT_rich Low_complexity Low_complexity 1 35 0 3 703 231 217 0 0 chr3L 15582561 15582607 -8960950 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 703 25 0 0 0 chr3L 15583607 15583632 -8959925 + AT_rich Low_complexity Low_complexity 1 25 0 3 703 214 146 0 47 chr3L 15584312 15584355 -8959202 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 703 36 23 0 0 chr3L 15585770 15585813 -8957744 + AT_rich Low_complexity Low_complexity 1 43 0 3 703 283 254 0 0 chr3L 15586079 15586150 -8957407 + (CAA)n Simple_repeat Simple_repeat 1 71 0 3 703 208 174 0 21 chr3L 15587507 15587554 -8956003 + (CAA)n Simple_repeat Simple_repeat 1 46 0 3 703 21 0 0 0 chr3L 15590133 15590154 -8953403 + AT_rich Low_complexity Low_complexity 1 21 0 3 703 195 139 0 0 chr3L 15590666 15590702 -8952855 + (A)n Simple_repeat Simple_repeat 1 36 0 3 703 194 62 31 0 chr3L 15592731 15592763 -8950794 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 3 703 183 42 0 0 chr3L 15594511 15594535 -8949022 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 703 200 255 0 0 chr3L 15594949 15594996 -8948561 + (CGA)n Simple_repeat Simple_repeat 2 48 0 3 703 189 178 0 0 chr3L 15595093 15595138 -8948419 + (CAG)n Simple_repeat Simple_repeat 1 45 0 3 703 212 167 24 0 chr3L 15595159 15595201 -8948356 + (CGA)n Simple_repeat Simple_repeat 2 44 0 3 703 208 143 0 0 chr3L 15596202 15596237 -8947320 + (A)n Simple_repeat Simple_repeat 1 35 0 3 703 201 179 0 51 chr3L 15596299 15596358 -8947199 + T-rich Low_complexity Low_complexity 5 60 0 3 703 183 139 0 0 chr3L 15596370 15596406 -8947151 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 3 704 228 111 0 0 chr3L 15598156 15598192 -8945365 + (CAG)n Simple_repeat Simple_repeat 3 38 0 3 704 309 125 0 0 chr3L 15598229 15598285 -8945272 + (CAG)n Simple_repeat Simple_repeat 1 56 0 3 704 251 277 0 0 chr3L 15598755 15598820 -8944737 + (CAA)n Simple_repeat Simple_repeat 3 67 0 3 704 201 234 0 0 chr3L 15599852 15599899 -8943658 + (CCA)n Simple_repeat Simple_repeat 1 47 0 3 704 180 130 0 69 chr3L 15600557 15600615 -8942942 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 3 704 204 189 0 70 chr3L 15601193 15601250 -8942307 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 3 704 207 100 0 0 chr3L 15602142 15602172 -8941385 + (A)n Simple_repeat Simple_repeat 1 30 0 3 704 24 0 0 0 chr3L 15603616 15603640 -8939917 + AT_rich Low_complexity Low_complexity 1 24 0 3 704 23 78 0 0 chr3L 15605700 15605751 -8937806 + AT_rich Low_complexity Low_complexity 1 51 0 3 704 23 78 0 0 chr3L 15609696 15609747 -8933810 + AT_rich Low_complexity Low_complexity 1 51 0 3 704 30 59 0 0 chr3L 15609863 15609914 -8933643 + AT_rich Low_complexity Low_complexity 1 51 0 3 704 31 0 0 0 chr3L 15610836 15610867 -8932690 + AT_rich Low_complexity Low_complexity 1 31 0 3 704 22 0 0 0 chr3L 15611016 15611038 -8932519 + AT_rich Low_complexity Low_complexity 1 22 0 3 704 189 94 0 0 chr3L 15612995 15613027 -8930530 + (GA)n Simple_repeat Simple_repeat 2 33 0 3 704 222 128 0 0 chr3L 15613226 15613265 -8930292 + (GGA)n Simple_repeat Simple_repeat 1 39 0 3 704 21 36 0 0 chr3L 15616434 15616462 -8927095 + AT_rich Low_complexity Low_complexity 1 28 0 3 704 26 30 0 0 chr3L 15616887 15616920 -8926637 + AT_rich Low_complexity Low_complexity 1 33 0 3 704 22 0 0 0 chr3L 15617008 15617030 -8926527 + AT_rich Low_complexity Low_complexity 1 22 0 3 704 315 49 0 0 chr3L 15617809 15617850 -8925707 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 3 704 21 0 0 0 chr3L 15621195 15621216 -8922341 + AT_rich Low_complexity Low_complexity 1 21 0 3 704 30 100 0 0 chr3L 15623920 15624020 -8919537 + AT_rich Low_complexity Low_complexity 1 100 0 3 704 35 0 0 0 chr3L 15626401 15626436 -8917121 + AT_rich Low_complexity Low_complexity 1 35 0 3 704 228 228 0 0 chr3L 15627637 15627694 -8915863 + (ACTG)n Simple_repeat Simple_repeat 4 60 0 3 704 29 84 0 0 chr3L 15627942 15628013 -8915544 + AT_rich Low_complexity Low_complexity 1 71 0 3 704 24 0 0 0 chr3L 15628491 15628515 -8915042 + AT_rich Low_complexity Low_complexity 1 24 0 3 704 27 62 0 0 chr3L 15628574 15628622 -8914935 + AT_rich Low_complexity Low_complexity 1 48 0 3 704 34 96 0 0 chr3L 15630084 15630188 -8913369 + AT_rich Low_complexity Low_complexity 1 104 0 3 704 24 0 0 0 chr3L 15632488 15632512 -8911045 + AT_rich Low_complexity Low_complexity 1 24 0 3 704 36 70 0 0 chr3L 15636760 15636831 -8906726 + AT_rich Low_complexity Low_complexity 1 71 0 3 704 21 0 0 0 chr3L 15637315 15637336 -8906221 + AT_rich Low_complexity Low_complexity 1 21 0 3 704 222 118 0 0 chr3L 15639207 15639241 -8904316 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 704 23 0 0 0 chr3L 15641159 15641182 -8902375 + AT_rich Low_complexity Low_complexity 1 23 0 3 704 21 57 0 0 chr3L 15641444 15641479 -8902078 + AT_rich Low_complexity Low_complexity 1 35 0 3 704 26 0 0 0 chr3L 15641680 15641706 -8901851 + AT_rich Low_complexity Low_complexity 1 26 0 3 704 22 0 0 0 chr3L 15643401 15643423 -8900134 + AT_rich Low_complexity Low_complexity 1 22 0 3 704 21 57 0 0 chr3L 15644069 15644104 -8899453 + AT_rich Low_complexity Low_complexity 1 35 0 3 704 26 30 0 0 chr3L 15644965 15644998 -8898559 + AT_rich Low_complexity Low_complexity 1 33 0 3 704 200 174 0 42 chr3L 15646941 15646989 -8896568 + (CCCCAA)n Simple_repeat Simple_repeat 6 51 0 3 704 22 0 0 0 chr3L 15651057 15651079 -8892478 + AT_rich Low_complexity Low_complexity 1 22 0 3 704 22 35 0 0 chr3L 15653333 15653362 -8890195 + AT_rich Low_complexity Low_complexity 1 29 0 3 704 25 0 0 0 chr3L 15655286 15655311 -8888246 + AT_rich Low_complexity Low_complexity 1 25 0 3 704 34 24 0 0 chr3L 15660700 15660741 -8882816 + AT_rich Low_complexity Low_complexity 1 41 0 3 704 22 0 0 0 chr3L 15666150 15666172 -8877385 + AT_rich Low_complexity Low_complexity 1 22 0 3 704 30 45 0 0 chr3L 15667468 15667512 -8876045 + AT_rich Low_complexity Low_complexity 1 44 0 3 704 38 22 0 0 chr3L 15677690 15677735 -8865822 + AT_rich Low_complexity Low_complexity 1 45 0 3 704 24 53 0 0 chr3L 15678654 15678692 -8864865 + AT_rich Low_complexity Low_complexity 1 38 0 3 704 22 0 0 0 chr3L 15680055 15680077 -8863480 + AT_rich Low_complexity Low_complexity 1 22 0 3 704 25 31 0 0 chr3L 15686241 15686273 -8857284 + AT_rich Low_complexity Low_complexity 1 32 0 3 704 206 182 0 22 chr3L 15689790 15689835 -8853722 + (TAA)n Simple_repeat Simple_repeat 3 46 0 3 704 282 56 0 0 chr3L 15690356 15690392 -8853165 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 3 704 333 169 0 38 chr3L 15691150 15691230 -8852327 - ROO_I LTR Pao -7527 729 653 3 704 212 235 0 0 chr3L 15693021 15693072 -8850485 + (CCGAG)n Simple_repeat Simple_repeat 3 53 0 3 704 257 320 16 16 chr3L 15701496 15701620 -8841937 + (CAA)n Simple_repeat Simple_repeat 3 126 0 3 704 195 100 0 0 chr3L 15704242 15704272 -8839285 + (ATG)n Simple_repeat Simple_repeat 1 30 0 3 704 24 0 0 0 chr3L 15707822 15707846 -8835711 + AT_rich Low_complexity Low_complexity 1 24 0 3 704 210 211 0 34 chr3L 15709505 15709564 -8833993 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 3 704 24 32 0 0 chr3L 15709757 15709788 -8833769 + AT_rich Low_complexity Low_complexity 1 31 0 3 704 26 0 0 0 chr3L 15710351 15710377 -8833180 + AT_rich Low_complexity Low_complexity 1 26 0 3 704 186 143 0 0 chr3L 15717100 15717135 -8826422 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 704 180 0 0 0 chr3L 15719450 15719470 -8824087 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 704 198 0 0 0 chr3L 15722525 15722547 -8821010 + (TC)n Simple_repeat Simple_repeat 2 23 0 3 704 27 0 0 0 chr3L 15723158 15723185 -8820372 + AT_rich Low_complexity Low_complexity 1 27 0 3 704 210 37 0 0 chr3L 15724033 15724060 -8819497 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 704 25 51 0 0 chr3L 15726601 15726640 -8816917 + AT_rich Low_complexity Low_complexity 1 39 0 3 705 242 273 0 0 chr3L 15729193 15729259 -8814298 + (CAA)n Simple_repeat Simple_repeat 1 66 0 3 705 195 114 0 0 chr3L 15730742 15730777 -8812780 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 705 29 47 0 0 chr3L 15732990 15733033 -8810524 + AT_rich Low_complexity Low_complexity 1 43 0 3 705 243 0 0 0 chr3L 15733130 15733157 -8810400 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 705 243 211 0 17 chr3L 15734110 15734168 -8809389 + (AACTG)n Simple_repeat Simple_repeat 2 58 0 3 705 21 0 0 0 chr3L 15737118 15737139 -8806418 + AT_rich Low_complexity Low_complexity 1 21 0 3 705 22 0 0 0 chr3L 15737916 15737938 -8805619 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 254 29 0 28 chr3L 15738312 15738348 -8805209 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 705 28 0 0 0 chr3L 15739785 15739813 -8803744 + AT_rich Low_complexity Low_complexity 1 28 0 3 705 215 143 0 23 chr3L 15741081 15741124 -8802433 + (CAACC)n Simple_repeat Simple_repeat 2 43 0 3 705 29 47 0 0 chr3L 15741933 15741976 -8801581 + AT_rich Low_complexity Low_complexity 1 43 0 3 705 25 0 0 0 chr3L 15742592 15742617 -8800940 + AT_rich Low_complexity Low_complexity 1 25 0 3 705 24 0 0 0 chr3L 15745295 15745319 -8798238 + AT_rich Low_complexity Low_complexity 1 24 0 3 705 245 210 19 39 chr3L 15745848 15745952 -8797605 + ROO_I LTR Pao 643 744 -7512 3 705 31 0 0 0 chr3L 15746690 15746721 -8796836 + AT_rich Low_complexity Low_complexity 1 31 0 3 705 252 130 0 0 chr3L 15747038 15747084 -8796473 + (CAG)n Simple_repeat Simple_repeat 3 48 0 3 705 201 182 0 0 chr3L 15749174 15749207 -8794350 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 705 22 0 0 0 chr3L 15751540 15751562 -8791995 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 185 59 0 56 chr3L 15753932 15753968 -8789589 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 3 705 24 0 0 0 chr3L 15755986 15756010 -8787547 + AT_rich Low_complexity Low_complexity 1 24 0 3 705 21 36 0 0 chr3L 15758019 15758047 -8785510 + AT_rich Low_complexity Low_complexity 1 28 0 3 705 31 58 0 0 chr3L 15758858 15758910 -8784647 + AT_rich Low_complexity Low_complexity 1 52 0 3 705 180 111 0 0 chr3L 15759761 15759788 -8783769 + (CGAAA)n Simple_repeat Simple_repeat 3 29 0 3 705 29 0 0 0 chr3L 15762121 15762150 -8781407 + AT_rich Low_complexity Low_complexity 1 29 0 3 705 24 0 0 0 chr3L 15762205 15762229 -8781328 + AT_rich Low_complexity Low_complexity 1 24 0 3 705 231 125 0 82 chr3L 15762246 15762307 -8781250 + A-rich Low_complexity Low_complexity 2 57 0 3 705 24 0 0 0 chr3L 15762507 15762531 -8781026 + AT_rich Low_complexity Low_complexity 1 24 0 3 705 21 57 0 0 chr3L 15764403 15764438 -8779119 + AT_rich Low_complexity Low_complexity 1 35 0 3 705 21 0 0 0 chr3L 15769497 15769518 -8774039 + AT_rich Low_complexity Low_complexity 1 21 0 3 705 22 0 0 0 chr3L 15771442 15771464 -8772093 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 26 30 0 0 chr3L 15771648 15771681 -8771876 + AT_rich Low_complexity Low_complexity 1 33 0 3 705 216 140 23 23 chr3L 15773818 15773862 -8769695 + T-rich Low_complexity Low_complexity 5 48 0 3 705 26 30 0 0 chr3L 15774941 15774974 -8768583 + AT_rich Low_complexity Low_complexity 1 33 0 3 705 22 0 0 0 chr3L 15776613 15776635 -8766922 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 21 0 0 0 chr3L 15779030 15779051 -8764506 + AT_rich Low_complexity Low_complexity 1 21 0 3 705 24 0 0 0 chr3L 15786431 15786455 -8757102 + AT_rich Low_complexity Low_complexity 1 24 0 3 705 21 0 0 0 chr3L 15790988 15791009 -8752548 + AT_rich Low_complexity Low_complexity 1 21 0 3 705 22 56 0 0 chr3L 15794818 15794854 -8748703 + AT_rich Low_complexity Low_complexity 1 36 0 3 705 27 96 0 0 chr3L 15797618 15797701 -8745856 + AT_rich Low_complexity Low_complexity 1 83 0 3 705 27 96 0 0 chr3L 15799668 15799751 -8743806 + AT_rich Low_complexity Low_complexity 1 83 0 3 705 33 60 0 35 chr3L 15801172 15801259 -8742298 + AT_rich Low_complexity Low_complexity 1 84 0 3 705 26 50 0 0 chr3L 15801456 15801496 -8742061 + AT_rich Low_complexity Low_complexity 1 40 0 3 705 210 158 0 0 chr3L 15802824 15802862 -8740695 + (ATG)n Simple_repeat Simple_repeat 3 40 0 3 705 26 74 0 0 chr3L 15803181 15803235 -8740322 + AT_rich Low_complexity Low_complexity 1 54 0 3 705 207 0 0 0 chr3L 15805013 15805036 -8738521 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 705 24 0 0 0 chr3L 15806873 15806897 -8736660 + AT_rich Low_complexity Low_complexity 1 24 0 3 705 22 0 0 0 chr3L 15807129 15807151 -8736406 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 25 0 0 0 chr3L 15809598 15809623 -8733934 + AT_rich Low_complexity Low_complexity 1 25 0 3 705 241 183 0 40 chr3L 15814627 15814701 -8728856 - ROO_I LTR Pao -7525 731 661 3 705 201 246 15 15 chr3L 15816765 15816831 -8726726 + (CTG)n Simple_repeat Simple_repeat 2 67 0 3 705 269 230 0 10 chr3L 15816936 15817037 -8726520 + (TTG)n Simple_repeat Simple_repeat 1 100 0 3 705 23 33 0 0 chr3L 15818495 15818525 -8725032 + AT_rich Low_complexity Low_complexity 1 30 0 3 705 291 286 0 0 chr3L 15818830 15818921 -8724636 + (TG)n Simple_repeat Simple_repeat 2 92 0 3 705 272 200 13 0 chr3L 15819150 15819225 -8724332 + (TTG)n Simple_repeat Simple_repeat 2 77 0 3 705 30 0 0 0 chr3L 15819777 15819807 -8723750 + AT_rich Low_complexity Low_complexity 1 30 0 3 705 23 33 0 0 chr3L 15820570 15820600 -8722957 + AT_rich Low_complexity Low_complexity 1 30 0 3 705 23 54 0 0 chr3L 15824734 15824771 -8718786 + AT_rich Low_complexity Low_complexity 1 37 0 3 705 25 31 0 0 chr3L 15825074 15825106 -8718451 + AT_rich Low_complexity Low_complexity 1 32 0 3 705 23 0 0 0 chr3L 15825156 15825179 -8718378 + AT_rich Low_complexity Low_complexity 1 23 0 3 705 186 43 0 0 chr3L 15826480 15826503 -8717054 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 705 56 29 0 0 chr3L 15828733 15828803 -8714754 + AT_rich Low_complexity Low_complexity 1 70 0 3 705 237 132 0 0 chr3L 15832323 15832361 -8711196 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 705 186 43 0 0 chr3L 15834042 15834065 -8709492 + (TTA)n Simple_repeat Simple_repeat 2 24 0 3 705 23 0 0 0 chr3L 15835010 15835033 -8708524 + AT_rich Low_complexity Low_complexity 1 23 0 3 705 22 35 0 0 chr3L 15835166 15835195 -8708362 + AT_rich Low_complexity Low_complexity 1 29 0 3 705 395 10 125 0 chr3L 15836185 15836289 -8707268 + (TA)n Simple_repeat Simple_repeat 2 118 0 3 705 21 36 0 0 chr3L 15836289 15836317 -8707240 + AT_rich Low_complexity Low_complexity 1 28 0 3 705 243 242 0 31 chr3L 15837468 15837532 -8706025 + (CCA)n Simple_repeat Simple_repeat 3 64 0 3 705 49 18 0 0 chr3L 15840624 15840680 -8702877 + AT_rich Low_complexity Low_complexity 1 56 0 3 705 25 0 0 0 chr3L 15841070 15841095 -8702462 + AT_rich Low_complexity Low_complexity 1 25 0 3 705 22 35 0 0 chr3L 15844280 15844309 -8699248 + AT_rich Low_complexity Low_complexity 1 29 0 3 705 30 0 0 0 chr3L 15845747 15845777 -8697780 + AT_rich Low_complexity Low_complexity 1 30 0 3 705 22 56 0 0 chr3L 15845798 15845834 -8697723 + AT_rich Low_complexity Low_complexity 1 36 0 3 705 357 102 0 0 chr3L 15846724 15846783 -8696774 + (TTGG)n Simple_repeat Simple_repeat 1 59 0 3 705 22 35 0 0 chr3L 15850718 15850747 -8692810 + AT_rich Low_complexity Low_complexity 1 29 0 3 705 189 0 0 0 chr3L 15851062 15851083 -8692474 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 705 204 279 0 0 chr3L 15852468 15852529 -8691028 + GA-rich Low_complexity Low_complexity 2 62 0 3 705 35 0 0 0 chr3L 15852568 15852603 -8690954 + AT_rich Low_complexity Low_complexity 1 35 0 3 705 44 46 0 0 chr3L 15853680 15853745 -8689812 + AT_rich Low_complexity Low_complexity 1 65 0 3 705 38 22 0 0 chr3L 15855488 15855533 -8688024 + AT_rich Low_complexity Low_complexity 1 45 0 3 705 225 174 0 0 chr3L 15856403 15856449 -8687108 + GA-rich Low_complexity Low_complexity 2 47 0 3 705 22 35 0 0 chr3L 15857428 15857457 -8686100 + AT_rich Low_complexity Low_complexity 1 29 0 3 705 202 200 0 0 chr3L 15858287 15858327 -8685230 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 705 222 37 0 0 chr3L 15858412 15858439 -8685118 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 705 23 33 0 0 chr3L 15859110 15859140 -8684417 + AT_rich Low_complexity Low_complexity 1 30 0 3 706 22 0 0 0 chr3L 15860603 15860625 -8682932 + AT_rich Low_complexity Low_complexity 1 22 0 3 706 241 363 0 0 chr3L 15863599 15863701 -8679856 + (TCTCTG)n Simple_repeat Simple_repeat 4 105 0 3 706 245 277 0 0 chr3L 15863623 15863688 -8679869 + (CTG)n Simple_repeat Simple_repeat 2 66 0 3 706 29 47 0 0 chr3L 15864111 15864154 -8679403 + AT_rich Low_complexity Low_complexity 1 43 0 3 706 24 32 0 0 chr3L 15864744 15864775 -8678782 + AT_rich Low_complexity Low_complexity 1 31 0 3 706 201 74 0 0 chr3L 15865856 15865883 -8677674 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 3 706 28 29 0 0 chr3L 15867580 15867615 -8675942 + AT_rich Low_complexity Low_complexity 1 35 0 3 706 24 0 0 0 chr3L 15868956 15868980 -8674577 + AT_rich Low_complexity Low_complexity 1 24 0 3 706 209 108 0 26 chr3L 15870311 15870349 -8673208 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 706 183 80 0 0 chr3L 15871238 15871263 -8672294 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 706 22 0 0 0 chr3L 15871494 15871516 -8672041 + AT_rich Low_complexity Low_complexity 1 22 0 3 706 24 67 0 0 chr3L 15874183 15874228 -8669329 + AT_rich Low_complexity Low_complexity 1 45 0 3 706 23 68 0 0 chr3L 15875253 15875297 -8668260 + AT_rich Low_complexity Low_complexity 1 44 0 3 706 24 0 0 0 chr3L 15876373 15876397 -8667160 + AT_rich Low_complexity Low_complexity 1 24 0 3 706 198 0 0 0 chr3L 15877790 15877812 -8665745 + (T)n Simple_repeat Simple_repeat 1 22 0 3 706 28 71 0 0 chr3L 15878872 15878928 -8664629 + AT_rich Low_complexity Low_complexity 1 56 0 3 706 218 81 27 0 chr3L 15880524 15880561 -8662996 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 706 37 52 0 0 chr3L 15885017 15885075 -8658482 + AT_rich Low_complexity Low_complexity 1 58 0 3 706 212 203 0 28 chr3L 15886845 15886916 -8656641 + (TTG)n Simple_repeat Simple_repeat 1 69 0 3 706 207 167 0 0 chr3L 15887147 15887189 -8656368 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 706 312 181 0 0 chr3L 15889687 15889770 -8653787 + (ACTG)n Simple_repeat Simple_repeat 4 86 0 3 706 201 239 0 0 chr3L 15890346 15890392 -8653165 + (TCTCTG)n Simple_repeat Simple_repeat 6 51 0 3 706 70 48 0 0 chr3L 15890874 15890979 -8652578 + AT_rich Low_complexity Low_complexity 1 105 0 3 706 21 0 0 0 chr3L 15891096 15891117 -8652440 + AT_rich Low_complexity Low_complexity 1 21 0 3 706 219 215 0 0 chr3L 15891537 15891602 -8651955 + (TTG)n Simple_repeat Simple_repeat 1 65 0 3 706 186 43 0 0 chr3L 15891676 15891699 -8651858 + (CTCA)n Simple_repeat Simple_repeat 3 25 0 3 706 239 0 32 0 chr3L 15891874 15891905 -8651652 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 706 4026 0 0 23 chr3L 15892384 15892857 -8650700 + LINEJ1_DM LINE Jockey 4559 5020 0 3 706 243 0 0 0 chr3L 15892857 15892884 -8650673 + (A)n Simple_repeat Simple_repeat 1 27 0 3 706 23 92 0 0 chr3L 15892975 15893040 -8650517 + AT_rich Low_complexity Low_complexity 1 65 0 3 706 27 29 0 0 chr3L 15893253 15893287 -8650270 + AT_rich Low_complexity Low_complexity 1 34 0 3 706 221 111 22 22 chr3L 15893429 15893475 -8650082 + T-rich Low_complexity Low_complexity 4 49 0 3 706 223 214 0 18 chr3L 15893874 15893931 -8649626 + (TA)n Simple_repeat Simple_repeat 1 56 0 3 706 29 28 0 0 chr3L 15896572 15896608 -8646949 + AT_rich Low_complexity Low_complexity 1 36 0 3 706 228 234 0 0 chr3L 15903494 15903558 -8639999 + A-rich Low_complexity Low_complexity 4 67 0 3 706 24 53 0 0 chr3L 15903882 15903920 -8639637 + AT_rich Low_complexity Low_complexity 1 38 0 3 706 21 0 0 0 chr3L 15903935 15903956 -8639601 + AT_rich Low_complexity Low_complexity 1 21 0 3 706 224 216 0 0 chr3L 15904762 15904813 -8638744 + GA-rich Low_complexity Low_complexity 2 52 0 3 706 204 235 0 0 chr3L 15907241 15907292 -8636265 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 706 28 0 0 0 chr3L 15909021 15909049 -8634508 + AT_rich Low_complexity Low_complexity 1 28 0 3 706 21 36 0 0 chr3L 15910494 15910522 -8633035 + AT_rich Low_complexity Low_complexity 1 28 0 3 706 29 28 0 0 chr3L 15911923 15911959 -8631598 + AT_rich Low_complexity Low_complexity 1 36 0 3 706 288 228 0 48 chr3L 15915269 15915352 -8628205 + A-rich Low_complexity Low_complexity 1 79 0 3 706 268 294 0 8 chr3L 15917481 15917601 -8625956 + (CA)n Simple_repeat Simple_repeat 1 119 0 3 706 24 32 0 0 chr3L 15918328 15918359 -8625198 + AT_rich Low_complexity Low_complexity 1 31 0 3 706 29 28 0 0 chr3L 15918647 15918683 -8624874 + AT_rich Low_complexity Low_complexity 1 36 0 3 706 27 29 0 0 chr3L 15919139 15919173 -8624384 + AT_rich Low_complexity Low_complexity 1 34 0 3 706 33 0 0 0 chr3L 15921798 15921831 -8621726 + AT_rich Low_complexity Low_complexity 1 33 0 3 706 3891 5 0 0 chr3L 15922351 15922779 -8620778 - ROO_LTR LTR Pao 0 428 1 3 706 72965 1 3 0 chr3L 15922779 15931012 -8612545 - ROO_I LTR Pao 0 8256 1 3 706 3891 5 0 0 chr3L 15931012 15931440 -8612117 - ROO_LTR LTR Pao 0 428 1 3 706 22 56 0 0 chr3L 15932387 15932423 -8611134 + AT_rich Low_complexity Low_complexity 1 36 0 3 706 227 31 0 30 chr3L 15934462 15934495 -8609062 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 3 706 22 35 0 0 chr3L 15935198 15935227 -8608330 + AT_rich Low_complexity Low_complexity 1 29 0 3 706 342 342 0 0 chr3L 15940090 15940245 -8603312 + (TCG)n Simple_repeat Simple_repeat 2 156 0 3 706 186 43 0 0 chr3L 15940253 15940276 -8603281 + (TGG)n Simple_repeat Simple_repeat 1 23 0 3 706 222 174 0 0 chr3L 15943014 15943060 -8600497 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 706 23 54 0 0 chr3L 15944823 15944860 -8598697 + AT_rich Low_complexity Low_complexity 1 37 0 3 706 225 172 0 0 chr3L 15945246 15945310 -8598247 + T-rich Low_complexity Low_complexity 2 65 0 3 706 31 76 0 0 chr3L 15948037 15948103 -8595454 + AT_rich Low_complexity Low_complexity 1 66 0 3 706 228 254 0 0 chr3L 15952577 15952636 -8590921 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 706 39 0 0 0 chr3L 15952725 15952764 -8590793 + AT_rich Low_complexity Low_complexity 1 39 0 3 706 195 69 0 0 chr3L 15953906 15953935 -8589622 + (T)n Simple_repeat Simple_repeat 1 29 0 3 706 183 204 0 0 chr3L 15963678 15963722 -8579835 + (TCG)n Simple_repeat Simple_repeat 2 45 0 3 706 211 292 0 0 chr3L 15967542 15967614 -8575943 + (CTG)n Simple_repeat Simple_repeat 1 72 0 3 706 26 30 0 0 chr3L 15969872 15969905 -8573652 + AT_rich Low_complexity Low_complexity 1 33 0 3 706 35 78 0 0 chr3L 15976098 15976175 -8567382 + AT_rich Low_complexity Low_complexity 1 77 0 3 706 21 0 0 0 chr3L 15977432 15977453 -8566104 + AT_rich Low_complexity Low_complexity 1 21 0 3 706 25 0 0 0 chr3L 15981233 15981258 -8562299 + AT_rich Low_complexity Low_complexity 1 25 0 3 706 210 158 0 0 chr3L 15985728 15985766 -8557791 + T-rich Low_complexity Low_complexity 1 38 0 3 706 180 0 0 0 chr3L 15986517 15986537 -8557020 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 706 234 128 0 0 chr3L 15987126 15987165 -8556392 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 706 228 304 0 0 chr3L 15987194 15987273 -8556284 + T-rich Low_complexity Low_complexity 1 79 0 3 706 23 0 0 0 chr3L 15987273 15987296 -8556261 + AT_rich Low_complexity Low_complexity 1 23 0 3 706 24 0 0 0 chr3L 15987517 15987541 -8556016 + AT_rich Low_complexity Low_complexity 1 24 0 3 706 282 244 0 0 chr3L 15987947 15988025 -8555532 + (CTG)n Simple_repeat Simple_repeat 1 78 0 3 706 26 0 0 0 chr3L 15989885 15989911 -8553646 + AT_rich Low_complexity Low_complexity 1 26 0 3 706 24 67 0 0 chr3L 15990008 15990053 -8553504 + AT_rich Low_complexity Low_complexity 1 45 0 3 706 203 179 0 0 chr3L 15990230 15990269 -8553288 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 3 707 185 108 0 26 chr3L 15991372 15991410 -8552147 + (CCAA)n Simple_repeat Simple_repeat 1 37 0 3 707 24 32 0 0 chr3L 15991808 15991839 -8551718 + AT_rich Low_complexity Low_complexity 1 31 0 3 707 228 143 0 0 chr3L 15992339 15992381 -8551176 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 707 22 56 0 0 chr3L 15992959 15992995 -8550562 + AT_rich Low_complexity Low_complexity 1 36 0 3 707 25 51 0 0 chr3L 15993766 15993805 -8549752 + AT_rich Low_complexity Low_complexity 1 39 0 3 707 23 54 0 0 chr3L 15993860 15993897 -8549660 + AT_rich Low_complexity Low_complexity 1 37 0 3 707 195 42 0 0 chr3L 15995553 15995577 -8547980 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 3 707 186 143 0 0 chr3L 15995611 15995646 -8547911 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 3 707 26 0 0 0 chr3L 15997725 15997751 -8545806 + AT_rich Low_complexity Low_complexity 1 26 0 3 707 23 0 0 0 chr3L 16003454 16003477 -8540080 + AT_rich Low_complexity Low_complexity 1 23 0 3 707 198 0 0 0 chr3L 16004671 16004693 -8538864 + (CCA)n Simple_repeat Simple_repeat 3 24 0 3 707 217 155 66 66 chr3L 16005849 16005925 -8537632 + (GTATG)n Simple_repeat Simple_repeat 1 76 0 3 707 275 152 0 33 chr3L 16006168 16006229 -8537328 + (ATGGTG)n Simple_repeat Simple_repeat 1 59 0 3 707 24 53 0 0 chr3L 16006598 16006636 -8536921 + AT_rich Low_complexity Low_complexity 1 38 0 3 707 189 74 0 0 chr3L 16007125 16007152 -8536405 + (A)n Simple_repeat Simple_repeat 1 27 0 3 707 24 53 0 0 chr3L 16007595 16007633 -8535924 + AT_rich Low_complexity Low_complexity 1 38 0 3 707 32 26 0 0 chr3L 16008310 16008349 -8535208 + AT_rich Low_complexity Low_complexity 1 39 0 3 707 24 0 0 0 chr3L 16009030 16009054 -8534503 + AT_rich Low_complexity Low_complexity 1 24 0 3 707 35 54 0 0 chr3L 16009222 16009278 -8534279 + AT_rich Low_complexity Low_complexity 1 56 0 3 707 204 208 0 40 chr3L 16011126 16011176 -8532381 + (CACCAT)n Simple_repeat Simple_repeat 5 52 0 3 707 192 158 0 0 chr3L 16011932 16011970 -8531587 + (ACCG)n Simple_repeat Simple_repeat 4 41 0 3 707 250 284 0 0 chr3L 16011999 16012080 -8531477 + ROO_I LTR Pao 652 732 -7524 3 707 273 98 0 0 chr3L 16012795 16012836 -8530721 + (CTG)n Simple_repeat Simple_repeat 3 43 0 3 707 189 0 0 0 chr3L 16013018 16013039 -8530518 + (CAG)n Simple_repeat Simple_repeat 3 23 0 3 707 474 88 0 0 chr3L 16014182 16014250 -8529307 + (CAT)n Simple_repeat Simple_repeat 3 70 0 3 707 27 49 0 0 chr3L 16014851 16014892 -8528665 + AT_rich Low_complexity Low_complexity 1 41 0 3 707 21 57 0 0 chr3L 16015018 16015053 -8528504 + AT_rich Low_complexity Low_complexity 1 35 0 3 707 228 181 10 162 chr3L 16015138 16015237 -8528320 - ROO_I LTR Pao -7518 738 655 3 707 234 219 0 27 chr3L 16015529 16015597 -8527960 + T-rich Low_complexity Low_complexity 1 66 0 3 707 29 0 0 0 chr3L 16016037 16016066 -8527491 + AT_rich Low_complexity Low_complexity 1 29 0 3 707 188 200 20 0 chr3L 16016497 16016547 -8527010 + (CAG)n Simple_repeat Simple_repeat 3 53 0 3 707 21 36 0 0 chr3L 16016852 16016880 -8526677 + AT_rich Low_complexity Low_complexity 1 28 0 3 707 26 50 0 0 chr3L 16017083 16017123 -8526434 + AT_rich Low_complexity Low_complexity 1 40 0 3 707 200 188 0 0 chr3L 16018527 16018559 -8524998 + (CAG)n Simple_repeat Simple_repeat 3 34 0 3 707 34 0 0 0 chr3L 16018923 16018957 -8524600 + AT_rich Low_complexity Low_complexity 1 34 0 3 707 28 29 0 0 chr3L 16019141 16019176 -8524381 + AT_rich Low_complexity Low_complexity 1 35 0 3 707 261 128 0 0 chr3L 16019326 16019373 -8524184 + (CAA)n Simple_repeat Simple_repeat 2 48 0 3 707 23 68 0 0 chr3L 16019724 16019768 -8523789 + AT_rich Low_complexity Low_complexity 1 44 0 3 707 209 204 0 0 chr3L 16020658 16020707 -8522850 + T-rich Low_complexity Low_complexity 1 49 0 3 707 183 80 0 0 chr3L 16022211 16022236 -8521321 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 707 204 156 22 0 chr3L 16025303 16025348 -8518209 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 3 707 183 100 0 0 chr3L 16025473 16025503 -8518054 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 3 707 21 71 0 0 chr3L 16025872 16025914 -8517643 + AT_rich Low_complexity Low_complexity 1 42 0 3 707 22 35 0 0 chr3L 16026341 16026370 -8517187 + AT_rich Low_complexity Low_complexity 1 29 0 3 707 24 0 0 0 chr3L 16026581 16026605 -8516952 + AT_rich Low_complexity Low_complexity 1 24 0 3 707 36 0 0 0 chr3L 16026990 16027026 -8516531 + AT_rich Low_complexity Low_complexity 1 36 0 3 707 195 69 0 0 chr3L 16034859 16034888 -8508669 + (A)n Simple_repeat Simple_repeat 1 29 0 3 707 248 214 29 0 chr3L 16035806 16035876 -8507681 + A-rich Low_complexity Low_complexity 5 76 0 3 707 182 156 22 0 chr3L 16035997 16036042 -8507515 + (CAAGC)n Simple_repeat Simple_repeat 2 47 0 3 707 209 128 0 25 chr3L 16036235 16036275 -8507282 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 707 219 88 0 0 chr3L 16036760 16036794 -8506763 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 707 186 128 0 0 chr3L 16040446 16040485 -8503072 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 707 245 169 0 17 chr3L 16043313 16043373 -8500184 + GA-rich Low_complexity Low_complexity 2 60 0 3 707 232 229 43 0 chr3L 16045315 16045385 -8498172 + (TG)n Simple_repeat Simple_repeat 1 73 0 3 707 207 100 0 0 chr3L 16046038 16046068 -8497489 + (CACG)n Simple_repeat Simple_repeat 1 30 0 3 707 210 150 0 0 chr3L 16046768 16046808 -8496749 + (TAAAA)n Simple_repeat Simple_repeat 3 42 0 3 707 22 0 0 0 chr3L 16049582 16049604 -8493953 + AT_rich Low_complexity Low_complexity 1 22 0 3 707 309 26 0 0 chr3L 16050594 16050632 -8492925 + (CGAAT)n Simple_repeat Simple_repeat 4 41 0 3 707 189 94 0 0 chr3L 16051280 16051312 -8492245 + (TTA)n Simple_repeat Simple_repeat 3 34 0 3 707 216 167 20 20 chr3L 16052365 16052414 -8491143 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 707 249 159 0 0 chr3L 16054503 16054547 -8489010 + (GGTTG)n Simple_repeat Simple_repeat 3 46 0 3 707 26 0 0 0 chr3L 16055160 16055186 -8488371 + AT_rich Low_complexity Low_complexity 1 26 0 3 707 202 211 0 53 chr3L 16056544 16056619 -8486938 + (TCTCTG)n Simple_repeat Simple_repeat 1 71 0 3 707 219 114 0 0 chr3L 16056700 16056735 -8486822 + (ATG)n Simple_repeat Simple_repeat 1 35 0 3 707 260 188 0 15 chr3L 16058009 16058074 -8485483 + (CCCG)n Simple_repeat Simple_repeat 1 64 0 3 707 263 275 0 0 chr3L 16058240 16058309 -8485248 + (CAA)n Simple_repeat Simple_repeat 1 69 0 3 707 192 143 0 0 chr3L 16058343 16058385 -8485172 + (CAA)n Simple_repeat Simple_repeat 3 44 0 3 707 207 69 0 0 chr3L 16058446 16058475 -8485082 + (CAG)n Simple_repeat Simple_repeat 1 29 0 3 707 183 100 0 0 chr3L 16058702 16058732 -8484825 + (TAAAAA)n Simple_repeat Simple_repeat 6 35 0 3 707 207 259 0 0 chr3L 16059868 16059926 -8483631 + (CAA)n Simple_repeat Simple_repeat 1 58 0 3 707 27 29 0 0 chr3L 16062449 16062483 -8481074 + AT_rich Low_complexity Low_complexity 1 34 0 3 707 21 0 0 0 chr3L 16063908 16063929 -8479628 + AT_rich Low_complexity Low_complexity 1 21 0 3 707 236 250 23 23 chr3L 16068911 16068997 -8474560 + (CACCAT)n Simple_repeat Simple_repeat 1 86 0 3 707 186 103 0 0 chr3L 16070648 16070677 -8472880 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 707 180 111 0 0 chr3L 16072689 16072716 -8470841 + (A)n Simple_repeat Simple_repeat 1 27 0 3 707 243 61 0 0 chr3L 16073298 16073331 -8470226 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 707 243 173 37 0 chr3L 16074427 16074508 -8469049 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 707 24 0 0 0 chr3L 16076619 16076643 -8466914 + AT_rich Low_complexity Low_complexity 1 24 0 3 707 30 27 0 0 chr3L 16080708 16080745 -8462812 + AT_rich Low_complexity Low_complexity 1 37 0 3 707 23 0 0 0 chr3L 16080978 16081001 -8462556 + AT_rich Low_complexity Low_complexity 1 23 0 3 707 21 36 0 0 chr3L 16082816 16082844 -8460713 + AT_rich Low_complexity Low_complexity 1 28 0 3 707 208 100 58 39 chr3L 16083805 16083857 -8459700 + (CGCTG)n Simple_repeat Simple_repeat 5 57 0 3 707 35 0 0 0 chr3L 16087034 16087069 -8456488 + AT_rich Low_complexity Low_complexity 1 35 0 3 707 35 41 0 0 chr3L 16090741 16090790 -8452767 + AT_rich Low_complexity Low_complexity 1 49 0 3 707 30 27 0 0 chr3L 16091533 16091570 -8451987 + AT_rich Low_complexity Low_complexity 1 37 0 3 707 29 104 0 0 chr3L 16093159 16093265 -8450292 + AT_rich Low_complexity Low_complexity 1 106 0 3 707 32 43 0 0 chr3L 16099532 16099578 -8443979 + AT_rich Low_complexity Low_complexity 1 46 0 3 707 29 0 0 0 chr3L 16099670 16099699 -8443858 + AT_rich Low_complexity Low_complexity 1 29 0 3 707 22 0 0 0 chr3L 16105873 16105895 -8437662 + AT_rich Low_complexity Low_complexity 1 22 0 3 707 246 156 0 0 chr3L 16107766 16107811 -8435746 + (CAG)n Simple_repeat Simple_repeat 1 45 0 3 707 21 36 0 0 chr3L 16108286 16108314 -8435243 + AT_rich Low_complexity Low_complexity 1 28 0 3 707 249 226 23 23 chr3L 16109335 16109421 -8434136 + ROO_I LTR Pao 643 728 -7528 3 707 243 61 0 0 chr3L 16109519 16109552 -8434005 + (CCA)n Simple_repeat Simple_repeat 1 33 0 3 707 255 173 99 0 chr3L 16109578 16109659 -8433898 + ROO_I LTR Pao 656 744 -7512 3 707 37 62 0 0 chr3L 16111515 16111580 -8431977 + AT_rich Low_complexity Low_complexity 1 65 0 3 707 208 281 12 24 chr3L 16113462 16113546 -8430011 + A-rich Low_complexity Low_complexity 3 85 0 3 707 26 30 0 0 chr3L 16113632 16113665 -8429892 + AT_rich Low_complexity Low_complexity 1 33 0 3 707 26 82 0 0 chr3L 16114396 16114457 -8429100 + AT_rich Low_complexity Low_complexity 1 61 0 3 707 200 184 21 65 chr3L 16114577 16114670 -8428887 + (TTAA)n Simple_repeat Simple_repeat 4 92 0 3 707 27 29 0 0 chr3L 16114951 16114985 -8428572 + AT_rich Low_complexity Low_complexity 1 34 0 3 708 27 0 0 0 chr3L 16122250 16122277 -8421280 + AT_rich Low_complexity Low_complexity 1 27 0 3 708 22 35 0 0 chr3L 16122409 16122438 -8421119 + AT_rich Low_complexity Low_complexity 1 29 0 3 708 24 0 0 0 chr3L 16124062 16124086 -8419471 + AT_rich Low_complexity Low_complexity 1 24 0 3 708 225 148 71 36 chr3L 16124834 16124918 -8418639 + (TATAA)n Simple_repeat Simple_repeat 2 88 0 3 708 23 0 0 0 chr3L 16125000 16125023 -8418534 + AT_rich Low_complexity Low_complexity 1 23 0 3 708 22 0 0 0 chr3L 16131333 16131355 -8412202 + AT_rich Low_complexity Low_complexity 1 22 0 3 708 221 247 45 57 chr3L 16131490 16131666 -8411891 + (TTTAA)n Simple_repeat Simple_repeat 1 174 0 3 708 336 48 0 0 chr3L 16133251 16133293 -8410264 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 708 397 249 16 48 chr3L 16134703 16134889 -8408668 + (CTG)n Simple_repeat Simple_repeat 1 180 0 3 708 204 262 12 23 chr3L 16134839 16134925 -8408632 + (TTG)n Simple_repeat Simple_repeat 1 85 0 3 708 22 70 0 0 chr3L 16137279 16137322 -8406235 + AT_rich Low_complexity Low_complexity 1 43 0 3 708 191 36 36 0 chr3L 16138354 16138382 -8405175 + (CATA)n Simple_repeat Simple_repeat 4 32 0 3 708 211 219 0 0 chr3L 16138497 16138538 -8405019 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 708 225 196 0 0 chr3L 16140526 16140577 -8402980 + A-rich Low_complexity Low_complexity 1 51 0 3 708 213 159 0 0 chr3L 16141393 16141437 -8402120 + CT-rich Low_complexity Low_complexity 2 45 0 3 708 271 182 0 38 chr3L 16141540 16141620 -8401937 - ROO_I LTR Pao -7518 738 662 3 708 351 265 0 0 chr3L 16141860 16141962 -8401595 - ROO_I LTR Pao -7514 742 641 3 708 23 0 0 0 chr3L 16144079 16144102 -8399455 + AT_rich Low_complexity Low_complexity 1 23 0 3 708 219 69 0 0 chr3L 16144677 16144706 -8398851 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 708 209 247 55 0 chr3L 16144979 16145052 -8398505 + (CAGAC)n Simple_repeat Simple_repeat 4 80 0 3 708 267 54 0 0 chr3L 16146112 16146149 -8397408 + (CAG)n Simple_repeat Simple_repeat 1 37 0 3 708 22 35 0 0 chr3L 16146332 16146361 -8397196 + AT_rich Low_complexity Low_complexity 1 29 0 3 708 202 224 0 0 chr3L 16146381 16146430 -8397127 + T-rich Low_complexity Low_complexity 4 52 0 3 708 210 71 0 0 chr3L 16149805 16149833 -8393724 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 708 183 42 0 0 chr3L 16149987 16150011 -8393546 + (A)n Simple_repeat Simple_repeat 1 24 0 3 708 207 0 0 0 chr3L 16150689 16150712 -8392845 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 708 204 97 0 0 chr3L 16150794 16150825 -8392732 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 708 243 0 0 0 chr3L 16154240 16154267 -8389290 + (T)n Simple_repeat Simple_repeat 1 27 0 3 708 188 167 21 0 chr3L 16155292 16155340 -8388217 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 708 183 42 0 0 chr3L 16155475 16155499 -8388058 + (GA)n Simple_repeat Simple_repeat 2 25 0 3 708 235 175 0 0 chr3L 16158060 16158100 -8385457 - DNAREP1_DM LINE Penelope -536 58 19 3 708 23 97 0 0 chr3L 16158233 16158305 -8385252 + AT_rich Low_complexity Low_complexity 1 72 0 3 708 30 0 0 0 chr3L 16159970 16160000 -8383557 + AT_rich Low_complexity Low_complexity 1 30 0 3 708 24 53 0 0 chr3L 16162120 16162158 -8381399 + AT_rich Low_complexity Low_complexity 1 38 0 3 708 30 0 0 0 chr3L 16162714 16162744 -8380813 + AT_rich Low_complexity Low_complexity 1 30 0 3 708 21 71 0 0 chr3L 16163093 16163135 -8380422 + AT_rich Low_complexity Low_complexity 1 42 0 3 708 285 257 0 13 chr3L 16163529 16163604 -8379953 - DNAREP1_DM LINE Penelope -501 93 20 3 708 33 0 0 0 chr3L 16163604 16163637 -8379920 + AT_rich Low_complexity Low_complexity 1 33 0 3 708 26 0 0 0 chr3L 16163792 16163818 -8379739 + AT_rich Low_complexity Low_complexity 1 26 0 3 708 21 36 0 0 chr3L 16164816 16164844 -8378713 + AT_rich Low_complexity Low_complexity 1 28 0 3 708 22 35 0 0 chr3L 16166201 16166230 -8377327 + AT_rich Low_complexity Low_complexity 1 29 0 3 708 220 274 0 0 chr3L 16167036 16167109 -8376448 + A-rich Low_complexity Low_complexity 1 73 0 3 708 189 107 0 0 chr3L 16167155 16167183 -8376374 + (CTG)n Simple_repeat Simple_repeat 2 29 0 3 708 198 71 0 0 chr3L 16167209 16167237 -8376320 + (CGA)n Simple_repeat Simple_repeat 2 29 0 3 708 191 204 19 0 chr3L 16167451 16167505 -8376052 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 708 222 0 25 50 chr3L 16167991 16168031 -8375526 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 3 708 249 119 0 0 chr3L 16168520 16168562 -8374995 + (CTG)n Simple_repeat Simple_repeat 3 44 0 3 708 186 103 0 0 chr3L 16171747 16171776 -8371781 + (CAA)n Simple_repeat Simple_repeat 3 31 0 3 708 180 152 0 0 chr3L 16171939 16171972 -8371585 + (TTG)n Simple_repeat Simple_repeat 1 33 0 3 708 180 0 0 0 chr3L 16174158 16174178 -8369379 + (CAGAG)n Simple_repeat Simple_repeat 4 23 0 3 708 255 31 0 0 chr3L 16175613 16175645 -8367912 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 3 708 225 250 0 0 chr3L 16175765 16175829 -8367728 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 708 192 40 0 0 chr3L 16175885 16175910 -8367647 + (CACCG)n Simple_repeat Simple_repeat 5 29 0 3 708 209 195 0 0 chr3L 16176018 16176059 -8367498 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 708 21 57 0 0 chr3L 16176341 16176376 -8367181 + AT_rich Low_complexity Low_complexity 1 35 0 3 708 234 0 0 0 chr3L 16177262 16177288 -8366269 + (T)n Simple_repeat Simple_repeat 1 26 0 3 708 43623 2 0 0 chr3L 16177297 16182008 -8361549 - BS2 LINE Jockey 0 4721 11 3 708 225 65 0 0 chr3L 16182221 16182252 -8361305 + (TCC)n Simple_repeat Simple_repeat 1 31 0 3 708 29 78 0 0 chr3L 16182789 16182853 -8360704 + AT_rich Low_complexity Low_complexity 1 64 0 3 708 22 0 0 0 chr3L 16183438 16183460 -8360097 + AT_rich Low_complexity Low_complexity 1 22 0 3 708 26 30 0 0 chr3L 16183584 16183617 -8359940 + AT_rich Low_complexity Low_complexity 1 33 0 3 708 22 35 0 0 chr3L 16183636 16183665 -8359892 + AT_rich Low_complexity Low_complexity 1 29 0 3 708 237 197 15 29 chr3L 16183924 16183992 -8359565 + (CCCA)n Simple_repeat Simple_repeat 4 70 0 3 708 23 0 0 0 chr3L 16184692 16184715 -8358842 + AT_rich Low_complexity Low_complexity 1 23 0 3 708 180 0 0 0 chr3L 16185109 16185129 -8358428 + (CAA)n Simple_repeat Simple_repeat 3 22 0 3 708 189 94 0 0 chr3L 16186165 16186197 -8357360 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 708 183 100 0 0 chr3L 16187026 16187056 -8356501 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 3 708 30 0 0 0 chr3L 16188016 16188046 -8355511 + AT_rich Low_complexity Low_complexity 1 30 0 3 708 235 214 0 0 chr3L 16188987 16189043 -8354514 + (GGATG)n Simple_repeat Simple_repeat 4 59 0 3 708 26 30 0 0 chr3L 16189574 16189607 -8353950 + AT_rich Low_complexity Low_complexity 1 33 0 3 708 22 56 0 0 chr3L 16190480 16190516 -8353041 + AT_rich Low_complexity Low_complexity 1 36 0 3 708 24 32 0 0 chr3L 16190538 16190569 -8352988 + AT_rich Low_complexity Low_complexity 1 31 0 3 708 318 152 630 0 chr3L 16190707 16190813 -8352744 + DNAREP1_DM LINE Penelope 429 594 0 3 708 35 71 0 0 chr3L 16192087 16192157 -8351400 + AT_rich Low_complexity Low_complexity 1 70 0 3 708 22 56 0 0 chr3L 16193016 16193052 -8350505 + AT_rich Low_complexity Low_complexity 1 36 0 3 708 23 33 0 0 chr3L 16194916 16194946 -8348611 + AT_rich Low_complexity Low_complexity 1 30 0 3 708 206 62 0 30 chr3L 16197221 16197254 -8346303 + (CGA)n Simple_repeat Simple_repeat 1 32 0 3 708 207 171 0 0 chr3L 16198106 16198141 -8345416 + (CAG)n Simple_repeat Simple_repeat 3 37 0 3 708 32 26 0 0 chr3L 16199915 16199954 -8343603 + AT_rich Low_complexity Low_complexity 1 39 0 3 708 327 113 0 0 chr3L 16200304 16200357 -8343200 + (CAT)n Simple_repeat Simple_repeat 1 53 0 3 708 204 163 23 0 chr3L 16201672 16201715 -8341842 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 708 204 283 0 0 chr3L 16202011 16202064 -8341493 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 708 31 88 0 0 chr3L 16202398 16202478 -8341079 + AT_rich Low_complexity Low_complexity 1 80 0 3 708 24 0 0 0 chr3L 16202945 16202969 -8340588 + AT_rich Low_complexity Low_complexity 1 24 0 3 708 23 0 0 0 chr3L 16204193 16204216 -8339341 + AT_rich Low_complexity Low_complexity 1 23 0 3 708 197 146 21 0 chr3L 16204612 16204660 -8338897 + GA-rich Low_complexity Low_complexity 1 49 0 3 708 29 47 0 0 chr3L 16205130 16205173 -8338384 + AT_rich Low_complexity Low_complexity 1 43 0 3 708 228 259 0 47 chr3L 16206426 16206511 -8337046 + (CTG)n Simple_repeat Simple_repeat 3 83 0 3 708 180 281 0 0 chr3L 16206611 16206700 -8336857 + (ATG)n Simple_repeat Simple_repeat 3 91 0 3 708 21 0 0 0 chr3L 16207515 16207536 -8336021 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 234 156 0 0 chr3L 16208346 16208391 -8335166 + (TCG)n Simple_repeat Simple_repeat 1 45 0 3 708 23 33 0 0 chr3L 16211976 16212006 -8331551 + AT_rich Low_complexity Low_complexity 1 30 0 3 708 195 69 0 0 chr3L 16212364 16212393 -8331164 + (A)n Simple_repeat Simple_repeat 1 29 0 3 708 24 0 0 0 chr3L 16212892 16212916 -8330641 + AT_rich Low_complexity Low_complexity 1 24 0 3 708 24 0 0 0 chr3L 16213416 16213440 -8330117 + AT_rich Low_complexity Low_complexity 1 24 0 3 708 21 0 0 0 chr3L 16214543 16214564 -8328993 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 225 94 0 0 chr3L 16214871 16214903 -8328654 + (CAA)n Simple_repeat Simple_repeat 1 32 0 3 708 221 128 21 0 chr3L 16215603 16215650 -8327907 + (CAA)n Simple_repeat Simple_repeat 2 49 0 3 708 180 0 0 0 chr3L 16215857 16215877 -8327680 + (TC)n Simple_repeat Simple_repeat 2 21 0 3 708 21 0 0 0 chr3L 16216456 16216477 -8327080 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 22 70 0 0 chr3L 16221927 16221970 -8321587 + AT_rich Low_complexity Low_complexity 1 43 0 3 708 22 35 0 0 chr3L 16222005 16222034 -8321523 + AT_rich Low_complexity Low_complexity 1 29 0 3 708 21 0 0 0 chr3L 16224827 16224848 -8318709 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 249 253 169 0 chr3L 16230356 16230439 -8313118 + DNAREP1_DM LINE Penelope 436 532 -62 3 708 310 139 35 147 chr3L 16230498 16230641 -8312916 - Jockey2 LINE Jockey -3 3425 3299 3 708 24 0 0 0 chr3L 16231613 16231637 -8311920 + AT_rich Low_complexity Low_complexity 1 24 0 3 708 25 0 0 0 chr3L 16233097 16233122 -8310435 + AT_rich Low_complexity Low_complexity 1 25 0 3 708 192 213 0 0 chr3L 16234916 16234977 -8308580 + (TG)n Simple_repeat Simple_repeat 1 61 0 3 708 25 51 0 0 chr3L 16235292 16235331 -8308226 + AT_rich Low_complexity Low_complexity 1 39 0 3 708 189 121 0 0 chr3L 16237129 16237162 -8306395 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 708 248 57 0 28 chr3L 16238654 16238690 -8304867 - PROTOP_B DNA P -614 539 505 3 708 25 0 0 0 chr3L 16238811 16238836 -8304721 + AT_rich Low_complexity Low_complexity 1 25 0 3 708 21 36 0 0 chr3L 16240434 16240462 -8303095 + AT_rich Low_complexity Low_complexity 1 28 0 3 708 294 29 0 0 chr3L 16242869 16242904 -8300653 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 708 200 304 14 0 chr3L 16245049 16245118 -8298439 + (CTG)n Simple_repeat Simple_repeat 2 71 0 3 708 35 0 0 0 chr3L 16247216 16247251 -8296306 + AT_rich Low_complexity Low_complexity 1 35 0 3 708 21 0 0 0 chr3L 16250977 16250998 -8292559 + AT_rich Low_complexity Low_complexity 1 21 0 3 709 205 258 0 0 chr3L 16253391 16253457 -8290100 + T-rich Low_complexity Low_complexity 3 68 0 3 709 180 0 0 0 chr3L 16253507 16253527 -8290030 + (TTA)n Simple_repeat Simple_repeat 1 20 0 3 709 22 0 0 0 chr3L 16257241 16257263 -8286294 + AT_rich Low_complexity Low_complexity 1 22 0 3 709 282 327 0 0 chr3L 16262769 16262873 -8280684 + (CTG)n Simple_repeat Simple_repeat 3 106 0 3 709 24 0 0 0 chr3L 16263199 16263223 -8280334 + AT_rich Low_complexity Low_complexity 1 24 0 3 709 26 30 0 0 chr3L 16269016 16269049 -8274508 + AT_rich Low_complexity Low_complexity 1 33 0 3 709 23 86 0 0 chr3L 16269986 16270044 -8273513 + AT_rich Low_complexity Low_complexity 1 58 0 3 709 22 94 0 0 chr3L 16272204 16272268 -8271289 + AT_rich Low_complexity Low_complexity 1 64 0 3 709 23 33 0 0 chr3L 16273936 16273966 -8269591 + AT_rich Low_complexity Low_complexity 1 30 0 3 709 216 336 8 8 chr3L 16274504 16274633 -8268924 + (CAG)n Simple_repeat Simple_repeat 2 130 0 3 709 232 125 20 20 chr3L 16275547 16275596 -8267961 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 709 21 57 0 0 chr3L 16277621 16277656 -8265901 + AT_rich Low_complexity Low_complexity 1 35 0 3 709 282 296 9 9 chr3L 16277991 16278107 -8265450 + (CAG)n Simple_repeat Simple_repeat 3 118 0 3 709 27 0 0 0 chr3L 16278791 16278818 -8264739 + AT_rich Low_complexity Low_complexity 1 27 0 3 709 273 109 0 0 chr3L 16281606 16281652 -8261905 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 709 23 54 0 0 chr3L 16282450 16282487 -8261070 + AT_rich Low_complexity Low_complexity 1 37 0 3 709 429 179 102 51 chr3L 16282513 16282631 -8260926 - DNAREP1_DM LINE Penelope -461 133 10 3 709 206 225 0 59 chr3L 16283497 16283582 -8259975 + (TGG)n Simple_repeat Simple_repeat 3 82 0 3 709 22 56 0 0 chr3L 16295312 16295348 -8248209 + AT_rich Low_complexity Low_complexity 1 36 0 3 709 439 177 0 0 chr3L 16296821 16296900 -8246657 + DNAREP1_DM LINE Penelope 6 84 -510 3 709 470 147 333 0 chr3L 16296920 16297049 -8246508 + DNAREP1_DM LINE Penelope 251 422 -172 3 709 31 0 0 0 chr3L 16299264 16299295 -8244262 + AT_rich Low_complexity Low_complexity 1 31 0 3 709 306 65 16 31 chr3L 16300425 16300489 -8243068 + (TATAA)n Simple_repeat Simple_repeat 3 65 0 3 709 27 49 0 0 chr3L 16302712 16302753 -8240804 + AT_rich Low_complexity Low_complexity 1 41 0 3 709 36 23 0 0 chr3L 16302812 16302855 -8240702 + AT_rich Low_complexity Low_complexity 1 43 0 3 709 25 0 0 0 chr3L 16304280 16304305 -8239252 + AT_rich Low_complexity Low_complexity 1 25 0 3 709 21 0 0 0 chr3L 16306931 16306952 -8236605 + AT_rich Low_complexity Low_complexity 1 21 0 3 709 24 67 0 0 chr3L 16306984 16307029 -8236528 + AT_rich Low_complexity Low_complexity 1 45 0 3 709 198 71 0 0 chr3L 16308862 16308890 -8234667 + (TATG)n Simple_repeat Simple_repeat 2 29 0 3 709 50 0 0 0 chr3L 16309896 16309946 -8233611 + AT_rich Low_complexity Low_complexity 1 50 0 3 709 207 196 0 0 chr3L 16311325 16311371 -8232186 + (CTG)n Simple_repeat Simple_repeat 1 46 0 3 709 35 24 0 0 chr3L 16313777 16313819 -8229738 + AT_rich Low_complexity Low_complexity 1 42 0 3 709 26 30 0 0 chr3L 16314246 16314279 -8229278 + AT_rich Low_complexity Low_complexity 1 33 0 3 709 597 170 123 45 chr3L 16317644 16317798 -8225759 + DNAREP1_DM LINE Penelope 398 563 -31 3 709 21 0 0 0 chr3L 16322507 16322528 -8221029 + AT_rich Low_complexity Low_complexity 1 21 0 3 709 21 57 0 0 chr3L 16326473 16326508 -8217049 + AT_rich Low_complexity Low_complexity 1 35 0 3 709 180 158 0 0 chr3L 16328093 16328131 -8215426 + (CAT)n Simple_repeat Simple_repeat 2 39 0 3 709 189 0 0 0 chr3L 16328835 16328856 -8214701 + (CAG)n Simple_repeat Simple_repeat 3 23 0 3 709 42 20 0 0 chr3L 16329627 16329676 -8213881 + AT_rich Low_complexity Low_complexity 1 49 0 3 709 21 0 0 0 chr3L 16330547 16330568 -8212989 + AT_rich Low_complexity Low_complexity 1 21 0 3 709 180 158 0 0 chr3L 16335438 16335476 -8208081 + (CAAT)n Simple_repeat Simple_repeat 2 39 0 3 709 183 188 0 0 chr3L 16336118 16336166 -8207391 + (CACCAT)n Simple_repeat Simple_repeat 4 51 0 3 709 49 43 0 0 chr3L 16338278 16338348 -8205209 + AT_rich Low_complexity Low_complexity 1 70 0 3 709 426 114 0 0 chr3L 16338670 16338749 -8204808 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 709 24 53 0 0 chr3L 16338821 16338859 -8204698 + AT_rich Low_complexity Low_complexity 1 38 0 3 709 21 0 0 0 chr3L 16340843 16340864 -8202693 + AT_rich Low_complexity Low_complexity 1 21 0 3 709 25 31 0 0 chr3L 16341044 16341076 -8202481 + AT_rich Low_complexity Low_complexity 1 32 0 3 709 34 0 0 0 chr3L 16349139 16349173 -8194384 + AT_rich Low_complexity Low_complexity 1 34 0 3 709 21 0 0 0 chr3L 16352335 16352356 -8191201 + AT_rich Low_complexity Low_complexity 1 21 0 3 709 268 267 0 13 chr3L 16354686 16354762 -8188795 + (TTG)n Simple_repeat Simple_repeat 3 77 0 3 709 24 32 0 0 chr3L 16355296 16355327 -8188230 + AT_rich Low_complexity Low_complexity 1 31 0 3 709 22 0 0 0 chr3L 16357504 16357526 -8186031 + AT_rich Low_complexity Low_complexity 1 22 0 3 709 21 0 0 0 chr3L 16361193 16361214 -8182343 + AT_rich Low_complexity Low_complexity 1 21 0 3 709 29 28 0 0 chr3L 16361274 16361310 -8182247 + AT_rich Low_complexity Low_complexity 1 36 0 3 709 23 33 0 0 chr3L 16365506 16365536 -8178021 + AT_rich Low_complexity Low_complexity 1 30 0 3 709 257 230 0 39 chr3L 16365626 16365703 -8177854 + (TATATG)n Simple_repeat Simple_repeat 4 77 0 3 709 23 0 0 0 chr3L 16366419 16366442 -8177115 + AT_rich Low_complexity Low_complexity 1 23 0 3 709 29 28 0 0 chr3L 16366609 16366645 -8176912 + AT_rich Low_complexity Low_complexity 1 36 0 3 709 32 0 0 0 chr3L 16366865 16366897 -8176660 + AT_rich Low_complexity Low_complexity 1 32 0 3 709 228 185 0 0 chr3L 16368197 16368251 -8175306 + (TTG)n Simple_repeat Simple_repeat 1 54 0 3 709 22 0 0 0 chr3L 16383665 16383687 -8159870 + AT_rich Low_complexity Low_complexity 1 22 0 3 710 34 65 0 0 chr3L 16386164 16386226 -8157331 + AT_rich Low_complexity Low_complexity 1 62 0 3 710 246 62 0 0 chr3L 16386745 16386777 -8156780 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 3 710 218 247 24 12 chr3L 16387663 16387745 -8155812 + (CAGTT)n Simple_repeat Simple_repeat 3 85 0 3 710 195 114 0 0 chr3L 16391672 16391707 -8151850 + (TAA)n Simple_repeat Simple_repeat 3 37 0 3 710 27 62 0 0 chr3L 16394634 16394682 -8148875 + AT_rich Low_complexity Low_complexity 1 48 0 3 710 207 0 0 0 chr3L 16395887 16395910 -8147647 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 710 21 0 0 0 chr3L 16396674 16396695 -8146862 + AT_rich Low_complexity Low_complexity 1 21 0 3 710 23 54 0 0 chr3L 16396996 16397033 -8146524 + AT_rich Low_complexity Low_complexity 1 37 0 3 710 252 59 0 0 chr3L 16397064 16397098 -8146459 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 710 21 71 0 0 chr3L 16397124 16397166 -8146391 + AT_rich Low_complexity Low_complexity 1 42 0 3 710 222 208 0 0 chr3L 16401677 16401725 -8141832 + CT-rich Low_complexity Low_complexity 2 49 0 3 710 232 255 0 18 chr3L 16402097 16402153 -8141404 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 710 205 243 13 26 chr3L 16404505 16404581 -8138976 + T-rich Low_complexity Low_complexity 2 76 0 3 710 201 147 0 0 chr3L 16404684 16404718 -8138839 + (GA)n Simple_repeat Simple_repeat 1 34 0 3 710 21 36 0 0 chr3L 16405667 16405695 -8137862 + AT_rich Low_complexity Low_complexity 1 28 0 3 710 23 33 0 0 chr3L 16415753 16415783 -8127774 + AT_rich Low_complexity Low_complexity 1 30 0 3 710 22 0 0 0 chr3L 16418476 16418498 -8125059 + AT_rich Low_complexity Low_complexity 1 22 0 3 710 22 56 0 0 chr3L 16420516 16420552 -8123005 + AT_rich Low_complexity Low_complexity 1 36 0 3 710 245 178 0 27 chr3L 16420670 16420745 -8122812 + (AGTTG)n Simple_repeat Simple_repeat 1 73 0 3 710 198 0 0 0 chr3L 16420948 16420970 -8122587 + (TAGG)n Simple_repeat Simple_repeat 1 22 0 3 710 250 257 14 0 chr3L 16421790 16421860 -8121697 + (TTCA)n Simple_repeat Simple_repeat 1 71 0 3 710 281 102 0 39 chr3L 16424333 16424384 -8119173 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 3 710 24 0 0 0 chr3L 16424935 16424959 -8118598 + AT_rich Low_complexity Low_complexity 1 24 0 3 710 26 50 0 0 chr3L 16425171 16425211 -8118346 + AT_rich Low_complexity Low_complexity 1 40 0 3 710 30 69 0 0 chr3L 16428449 16428507 -8115050 + AT_rich Low_complexity Low_complexity 1 58 0 3 710 237 33 0 0 chr3L 16428734 16428764 -8114793 + (TTC)n Simple_repeat Simple_repeat 3 32 0 3 710 244 161 99 0 chr3L 16429096 16429177 -8114380 - HOBO DNA hAT -1065 1951 1863 3 710 231 103 0 0 chr3L 16429463 16429502 -8114055 + (GCTG)n Simple_repeat Simple_repeat 1 39 0 3 710 258 56 0 0 chr3L 16429532 16429568 -8113989 + (GCTG)n Simple_repeat Simple_repeat 2 37 0 3 710 26 64 0 0 chr3L 16430252 16430299 -8113258 + AT_rich Low_complexity Low_complexity 1 47 0 3 710 213 121 0 0 chr3L 16430499 16430532 -8113025 + (CAT)n Simple_repeat Simple_repeat 1 33 0 3 710 180 0 0 0 chr3L 16430837 16430857 -8112700 + (T)n Simple_repeat Simple_repeat 1 20 0 3 710 189 0 0 0 chr3L 16431119 16431140 -8112417 + (ATG)n Simple_repeat Simple_repeat 2 22 0 3 710 180 111 0 0 chr3L 16433163 16433190 -8110367 + (CTG)n Simple_repeat Simple_repeat 3 29 0 3 710 195 42 0 0 chr3L 16434550 16434574 -8108983 + (T)n Simple_repeat Simple_repeat 1 24 0 3 710 225 65 0 0 chr3L 16435661 16435692 -8107865 + (GATTG)n Simple_repeat Simple_repeat 1 31 0 3 710 20770 5 0 2 chr3L 16437001 16439286 -8104271 + DOC LINE Jockey 2445 4725 0 3 710 219 204 18 18 chr3L 16442585 16442640 -8100917 + (TTG)n Simple_repeat Simple_repeat 2 56 0 3 710 22 0 0 0 chr3L 16443062 16443084 -8100473 + AT_rich Low_complexity Low_complexity 1 22 0 3 710 243 164 0 0 chr3L 16443401 16443462 -8100095 + (CTG)n Simple_repeat Simple_repeat 3 63 0 3 710 183 42 0 0 chr3L 16444776 16444800 -8098757 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 710 29 70 0 0 chr3L 16446187 16446244 -8097313 + AT_rich Low_complexity Low_complexity 1 57 0 3 710 249 33 0 0 chr3L 16447208 16447238 -8096319 + (CTG)n Simple_repeat Simple_repeat 3 32 0 3 710 289 215 38 0 chr3L 16447374 16447453 -8096104 + (CAG)n Simple_repeat Simple_repeat 1 82 0 3 710 22 70 0 0 chr3L 16447585 16447628 -8095929 + AT_rich Low_complexity Low_complexity 1 43 0 3 710 249 108 0 0 chr3L 16447833 16447870 -8095687 + (CTG)n Simple_repeat Simple_repeat 2 38 0 3 710 207 0 0 0 chr3L 16448116 16448139 -8095418 + (CTG)n Simple_repeat Simple_repeat 3 25 0 3 710 211 111 0 27 chr3L 16448772 16448809 -8094748 + (CTG)n Simple_repeat Simple_repeat 3 38 0 3 710 236 172 0 17 chr3L 16448989 16449048 -8094509 + (TTTAG)n Simple_repeat Simple_repeat 3 60 0 3 710 258 156 0 0 chr3L 16449195 16449240 -8094317 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 710 235 63 79 0 chr3L 16451409 16451472 -8092085 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 710 282 87 0 0 chr3L 16451894 16451940 -8091617 + (T)n Simple_repeat Simple_repeat 1 46 0 3 710 201 162 0 0 chr3L 16455538 16455575 -8087982 + A-rich Low_complexity Low_complexity 1 37 0 3 710 23 0 0 0 chr3L 16457004 16457027 -8086530 + AT_rich Low_complexity Low_complexity 1 23 0 3 710 29 70 0 0 chr3L 16457162 16457219 -8086338 + AT_rich Low_complexity Low_complexity 1 57 0 3 710 278 67 22 0 chr3L 16457599 16457644 -8085913 + (ATGGTG)n Simple_repeat Simple_repeat 3 48 0 3 710 186 167 0 0 chr3L 16459610 16459646 -8083911 + T-rich Low_complexity Low_complexity 1 36 0 3 710 285 29 0 0 chr3L 16465859 16465893 -8077664 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 3 710 23 0 0 0 chr3L 16469155 16469178 -8074379 + AT_rich Low_complexity Low_complexity 1 23 0 3 710 23 33 0 0 chr3L 16469557 16469587 -8073970 + AT_rich Low_complexity Low_complexity 1 30 0 3 710 31 58 0 0 chr3L 16469915 16469967 -8073590 + AT_rich Low_complexity Low_complexity 1 52 0 3 710 246 160 0 0 chr3L 16470377 16470427 -8073130 + (CTG)n Simple_repeat Simple_repeat 3 52 0 3 710 189 0 0 0 chr3L 16470449 16470470 -8073087 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 3 710 261 219 13 40 chr3L 16470600 16470676 -8072881 + (CTG)n Simple_repeat Simple_repeat 1 74 0 3 710 21 36 0 0 chr3L 16471815 16471843 -8071714 + AT_rich Low_complexity Low_complexity 1 28 0 3 710 21 36 0 0 chr3L 16472228 16472256 -8071301 + AT_rich Low_complexity Low_complexity 1 28 0 3 710 234 136 0 0 chr3L 16473371 16473415 -8070142 + (TTG)n Simple_repeat Simple_repeat 1 44 0 3 710 232 154 19 37 chr3L 16476109 16476163 -8067394 + (CAG)n Simple_repeat Simple_repeat 1 53 0 3 710 305 82 0 20 chr3L 16476318 16476368 -8067189 + (CGAAT)n Simple_repeat Simple_repeat 3 51 0 3 710 35 78 0 0 chr3L 16476882 16476959 -8066598 + AT_rich Low_complexity Low_complexity 1 77 0 3 710 210 196 20 0 chr3L 16477398 16477449 -8066108 + A-rich Low_complexity Low_complexity 3 54 0 3 710 228 164 0 64 chr3L 16479365 16479443 -8064114 + ROO_I LTR Pao 657 729 -7527 3 710 32 0 0 0 chr3L 16481090 16481122 -8062435 + AT_rich Low_complexity Low_complexity 1 32 0 3 710 243 103 0 0 chr3L 16481621 16481660 -8061897 + (TTG)n Simple_repeat Simple_repeat 2 40 0 3 710 204 330 0 60 chr3L 16481869 16481985 -8061572 + G-rich Low_complexity Low_complexity 2 110 0 3 710 21 0 0 0 chr3L 16482155 16482176 -8061381 + AT_rich Low_complexity Low_complexity 1 21 0 3 710 267 31 0 0 chr3L 16482745 16482777 -8060780 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 710 216 277 21 21 chr3L 16483326 16483422 -8060135 + (TTGGGG)n Simple_repeat Simple_repeat 1 96 0 3 710 3914 7 0 2 chr3L 16487148 16487589 -8055968 - LINEJ1_DM LINE Jockey 0 5020 4581 3 710 22 35 0 0 chr3L 16488693 16488722 -8054835 + AT_rich Low_complexity Low_complexity 1 29 0 3 710 24 96 0 0 chr3L 16489598 16489671 -8053886 + AT_rich Low_complexity Low_complexity 1 73 0 3 710 22 35 0 0 chr3L 16489888 16489917 -8053640 + AT_rich Low_complexity Low_complexity 1 29 0 3 710 23 0 0 0 chr3L 16490540 16490563 -8052994 + AT_rich Low_complexity Low_complexity 1 23 0 3 710 29 70 0 0 chr3L 16490589 16490646 -8052911 + AT_rich Low_complexity Low_complexity 1 57 0 3 710 29 0 0 0 chr3L 16493956 16493985 -8049572 + AT_rich Low_complexity Low_complexity 1 29 0 3 710 22 0 0 0 chr3L 16494423 16494445 -8049112 + AT_rich Low_complexity Low_complexity 1 22 0 3 710 21 0 0 0 chr3L 16494900 16494921 -8048636 + AT_rich Low_complexity Low_complexity 1 21 0 3 710 22 88 0 0 chr3L 16495084 16495141 -8048416 + AT_rich Low_complexity Low_complexity 1 57 0 3 710 29 60 0 0 chr3L 16497707 16497757 -8045800 + AT_rich Low_complexity Low_complexity 1 50 0 3 710 23 0 0 0 chr3L 16498660 16498683 -8044874 + AT_rich Low_complexity Low_complexity 1 23 0 3 710 33 25 0 0 chr3L 16500171 16500211 -8043346 + AT_rich Low_complexity Low_complexity 1 40 0 3 710 222 37 0 0 chr3L 16505559 16505586 -8037971 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 710 188 167 0 20 chr3L 16508728 16508777 -8034780 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 710 32 0 0 0 chr3L 16509185 16509217 -8034340 + AT_rich Low_complexity Low_complexity 1 32 0 3 710 228 189 0 19 chr3L 16514683 16514737 -8028820 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 3 711 47292 5 0 1 chr3L 16516429 16521555 -8022002 + BS LINE Jockey 5 5126 0 3 711 216 143 0 0 chr3L 16521592 16521634 -8021923 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 711 25 31 0 0 chr3L 16523350 16523382 -8020175 + AT_rich Low_complexity Low_complexity 1 32 0 3 711 180 0 0 0 chr3L 16524057 16524077 -8019480 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 711 264 59 0 0 chr3L 16526223 16526257 -8017300 + (ATTCG)n Simple_repeat Simple_repeat 2 35 0 3 711 34 99 0 0 chr3L 16526551 16526662 -8016895 + AT_rich Low_complexity Low_complexity 1 111 0 3 711 25 0 0 0 chr3L 16527719 16527744 -8015813 + AT_rich Low_complexity Low_complexity 1 25 0 3 711 23 33 0 0 chr3L 16528706 16528736 -8014821 + AT_rich Low_complexity Low_complexity 1 30 0 3 711 21 0 0 0 chr3L 16534568 16534589 -8008968 + AT_rich Low_complexity Low_complexity 1 21 0 3 711 21 36 0 0 chr3L 16534770 16534798 -8008759 + AT_rich Low_complexity Low_complexity 1 28 0 3 711 23 54 0 0 chr3L 16538440 16538477 -8005080 + AT_rich Low_complexity Low_complexity 1 37 0 3 711 180 0 0 0 chr3L 16538957 16538977 -8004580 + (TTA)n Simple_repeat Simple_repeat 3 22 0 3 711 22 35 0 0 chr3L 16545211 16545240 -7998317 + AT_rich Low_complexity Low_complexity 1 29 0 3 711 27 29 0 0 chr3L 16545285 16545319 -7998238 + AT_rich Low_complexity Low_complexity 1 34 0 3 711 24 0 0 0 chr3L 16547591 16547615 -7995942 + AT_rich Low_complexity Low_complexity 1 24 0 3 711 24 53 0 0 chr3L 16553016 16553054 -7990503 + AT_rich Low_complexity Low_complexity 1 38 0 3 711 24 0 0 0 chr3L 16555147 16555171 -7988386 + AT_rich Low_complexity Low_complexity 1 24 0 3 711 21 36 0 0 chr3L 16558070 16558098 -7985459 + AT_rich Low_complexity Low_complexity 1 28 0 3 711 24 0 0 0 chr3L 16559450 16559474 -7984083 + AT_rich Low_complexity Low_complexity 1 24 0 3 711 24 32 0 0 chr3L 16565951 16565982 -7977575 + AT_rich Low_complexity Low_complexity 1 31 0 3 711 22 35 0 0 chr3L 16566268 16566297 -7977260 + AT_rich Low_complexity Low_complexity 1 29 0 3 711 2533 170 41 110 chr3L 16570093 16570793 -7972764 - TART LINE telomeric -9792 4685 4034 3 711 29 0 0 0 chr3L 16588843 16588872 -7954685 + AT_rich Low_complexity Low_complexity 1 29 0 3 711 211 145 0 28 chr3L 16588946 16589017 -7954540 + (TAA)n Simple_repeat Simple_repeat 2 70 0 3 711 23 0 0 0 chr3L 16589017 16589040 -7954517 + AT_rich Low_complexity Low_complexity 1 23 0 3 711 24 0 0 0 chr3L 16595901 16595925 -7947632 + AT_rich Low_complexity Low_complexity 1 24 0 3 711 62 14 0 0 chr3L 16596652 16596721 -7946836 + AT_rich Low_complexity Low_complexity 1 69 0 3 711 27 73 0 0 chr3L 16603604 16603659 -7939898 + AT_rich Low_complexity Low_complexity 1 55 0 3 711 21 0 0 0 chr3L 16606342 16606363 -7937194 + AT_rich Low_complexity Low_complexity 1 21 0 3 711 200 306 0 0 chr3L 16606969 16607031 -7936526 + (TTA)n Simple_repeat Simple_repeat 2 63 0 3 711 22 0 0 0 chr3L 16608511 16608533 -7935024 + AT_rich Low_complexity Low_complexity 1 22 0 3 711 21 36 0 0 chr3L 16608654 16608682 -7934875 + AT_rich Low_complexity Low_complexity 1 28 0 3 711 21 0 0 0 chr3L 16608776 16608797 -7934760 + AT_rich Low_complexity Low_complexity 1 21 0 3 711 3591 5 7 7 chr3L 16609664 16610078 -7933479 + DM297_LTR LTR Gypsy 1 414 0 3 711 30691 5 0 0 chr3L 16610078 16614098 -7929459 + DM297_I LTR Gypsy 1 4021 -2146 3 711 3735 14 0 0 chr3L 16614077 16614521 -7929036 + DM297_I LTR Gypsy 5724 6167 0 3 711 3614 5 7 7 chr3L 16614521 16614935 -7928622 + DM297_LTR LTR Gypsy 1 414 0 3 711 180 152 0 0 chr3L 16615149 16615182 -7928375 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 711 206 183 0 61 chr3L 16619431 16619530 -7924027 + (TTG)n Simple_repeat Simple_repeat 3 95 0 3 711 180 77 0 0 chr3L 16620497 16620523 -7923034 + (TCG)n Simple_repeat Simple_repeat 2 27 0 3 711 215 240 0 0 chr3L 16620530 16620580 -7922977 + (CAT)n Simple_repeat Simple_repeat 3 52 0 3 711 211 282 0 0 chr3L 16626275 16626346 -7917211 + T-rich Low_complexity Low_complexity 1 71 0 3 711 26 30 0 0 chr3L 16630524 16630557 -7913000 + AT_rich Low_complexity Low_complexity 1 33 0 3 711 23 0 0 0 chr3L 16630739 16630762 -7912795 + AT_rich Low_complexity Low_complexity 1 23 0 3 711 24 32 0 0 chr3L 16631996 16632027 -7911530 + AT_rich Low_complexity Low_complexity 1 31 0 3 711 21 36 0 0 chr3L 16637121 16637149 -7906408 + AT_rich Low_complexity Low_complexity 1 28 0 3 711 212 207 52 0 chr3L 16638863 16638921 -7904636 + CT-rich Low_complexity Low_complexity 1 61 0 3 711 21 0 0 0 chr3L 16641876 16641897 -7901660 + AT_rich Low_complexity Low_complexity 1 21 0 3 711 27 0 0 0 chr3L 16644757 16644784 -7898773 + AT_rich Low_complexity Low_complexity 1 27 0 3 712 24 32 0 0 chr3L 16648297 16648328 -7895229 + AT_rich Low_complexity Low_complexity 1 31 0 3 712 32 0 0 0 chr3L 16652695 16652727 -7890830 + AT_rich Low_complexity Low_complexity 1 32 0 3 712 26 0 0 0 chr3L 16653566 16653592 -7889965 + AT_rich Low_complexity Low_complexity 1 26 0 3 712 232 270 0 63 chr3L 16655097 16655192 -7888365 + DNAREP1_DM LINE Penelope 504 592 -2 3 712 24 0 0 0 chr3L 16658069 16658093 -7885464 + AT_rich Low_complexity Low_complexity 1 24 0 3 712 192 182 0 0 chr3L 16661107 16661151 -7882406 + GA-rich Low_complexity Low_complexity 2 45 0 3 712 180 0 0 0 chr3L 16662751 16662771 -7880786 + (ATTCG)n Simple_repeat Simple_repeat 2 21 0 3 712 27 49 0 0 chr3L 16665842 16665883 -7877674 + AT_rich Low_complexity Low_complexity 1 41 0 3 712 29 0 0 0 chr3L 16666774 16666803 -7876754 + AT_rich Low_complexity Low_complexity 1 29 0 3 712 228 35 0 0 chr3L 16669707 16669736 -7873821 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 712 26 64 0 0 chr3L 16670086 16670133 -7873424 + AT_rich Low_complexity Low_complexity 1 47 0 3 712 29 0 0 0 chr3L 16670735 16670764 -7872793 + AT_rich Low_complexity Low_complexity 1 29 0 3 712 263 72 0 23 chr3L 16670798 16670841 -7872716 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 712 324 245 0 0 chr3L 16671574 16671668 -7871889 + (CTG)n Simple_repeat Simple_repeat 1 94 0 3 712 214 178 22 0 chr3L 16672385 16672430 -7871127 + (CTG)n Simple_repeat Simple_repeat 1 46 0 3 712 231 114 0 0 chr3L 16672623 16672658 -7870899 + (TTG)n Simple_repeat Simple_repeat 1 35 0 3 712 210 191 0 0 chr3L 16672704 16672751 -7870806 + (CTG)n Simple_repeat Simple_repeat 1 47 0 3 712 337 171 34 0 chr3L 16672846 16672934 -7870623 - ROO_I LTR Pao -7513 743 653 3 712 310 91 18 18 chr3L 16676677 16676733 -7866824 + (CTG)n Simple_repeat Simple_repeat 1 56 0 3 712 273 173 8 141 chr3L 16676786 16676907 -7866650 + ROO_I LTR Pao 631 735 -7521 3 712 32 91 0 0 chr3L 16677086 16677174 -7866383 + AT_rich Low_complexity Low_complexity 1 88 0 3 712 2196 4 58 0 chr3L 16677174 16677402 -7866155 + Copia_LTR LTR Copia 1 228 -48 3 712 216 0 0 0 chr3L 16677402 16677426 -7866131 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 3 712 2196 4 58 0 chr3L 16677426 16677458 -7866099 + Copia_LTR LTR Copia 229 274 -2 3 712 41777 1 0 0 chr3L 16677458 16682053 -7861504 + Copia_I LTR Copia 1 4593 0 3 712 2196 4 58 0 chr3L 16682053 16682281 -7861276 + Copia_LTR LTR Copia 1 228 -48 3 712 216 0 0 0 chr3L 16682281 16682305 -7861252 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 3 712 2196 4 58 0 chr3L 16682305 16682337 -7861220 + Copia_LTR LTR Copia 229 274 -2 3 712 220 282 0 0 chr3L 16682657 16682728 -7860829 + T-rich Low_complexity Low_complexity 1 71 0 3 712 531 43 0 0 chr3L 16683283 16683353 -7860204 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 712 288 0 0 0 chr3L 16685905 16685937 -7857620 + (CAG)n Simple_repeat Simple_repeat 2 33 0 3 712 21 71 0 0 chr3L 16686535 16686577 -7856980 + AT_rich Low_complexity Low_complexity 1 42 0 3 712 26 0 0 0 chr3L 16690367 16690393 -7853164 + AT_rich Low_complexity Low_complexity 1 26 0 3 712 21 57 0 0 chr3L 16693272 16693307 -7850250 + AT_rich Low_complexity Low_complexity 1 35 0 3 712 29 28 0 0 chr3L 16693895 16693931 -7849626 + AT_rich Low_complexity Low_complexity 1 36 0 3 712 33 0 0 0 chr3L 16700434 16700467 -7843090 + AT_rich Low_complexity Low_complexity 1 33 0 3 712 28 29 0 0 chr3L 16702893 16702928 -7840629 + AT_rich Low_complexity Low_complexity 1 35 0 3 712 30 0 0 0 chr3L 16702978 16703008 -7840549 + AT_rich Low_complexity Low_complexity 1 30 0 3 712 46 68 0 0 chr3L 16703513 16703601 -7839956 + AT_rich Low_complexity Low_complexity 1 88 0 3 712 205 125 24 24 chr3L 16707428 16707469 -7836088 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 3 712 217 222 0 0 chr3L 16710893 16710938 -7832619 + (CCA)n Simple_repeat Simple_repeat 3 47 0 3 712 203 233 0 0 chr3L 16715500 16715543 -7828014 + (CGA)n Simple_repeat Simple_repeat 3 45 0 3 712 25 0 0 0 chr3L 16718654 16718679 -7824878 + AT_rich Low_complexity Low_complexity 1 25 0 3 712 864 95 0 0 chr3L 16724085 16724211 -7819346 - BS LINE Jockey 0 5126 5001 3 712 21 36 0 0 chr3L 16727367 16727395 -7816162 + AT_rich Low_complexity Low_complexity 1 28 0 3 712 24 0 0 0 chr3L 16730280 16730304 -7813253 + AT_rich Low_complexity Low_complexity 1 24 0 3 712 311 152 0 17 chr3L 16733840 16733900 -7809657 - DNAREP1_DM LINE Penelope 0 594 536 3 712 288 227 107 0 chr3L 16734721 16734796 -7808761 + DNAREP1_DM LINE Penelope 497 579 -15 3 712 28 95 0 0 chr3L 16735027 16735111 -7808446 + AT_rich Low_complexity Low_complexity 1 84 0 3 712 36 40 0 0 chr3L 16735880 16735930 -7807627 + AT_rich Low_complexity Low_complexity 1 50 0 3 712 25 0 0 0 chr3L 16740826 16740851 -7802706 + AT_rich Low_complexity Low_complexity 1 25 0 3 712 39 60 0 0 chr3L 16742475 16742542 -7801015 + AT_rich Low_complexity Low_complexity 1 67 0 3 712 31 44 0 0 chr3L 16748390 16748435 -7795122 + AT_rich Low_complexity Low_complexity 1 45 0 3 712 213 154 0 0 chr3L 16749331 16749370 -7794187 + A-rich Low_complexity Low_complexity 1 39 0 3 712 26 30 0 0 chr3L 16749664 16749697 -7793860 + AT_rich Low_complexity Low_complexity 1 33 0 3 712 26 64 0 0 chr3L 16750611 16750658 -7792899 + AT_rich Low_complexity Low_complexity 1 47 0 3 712 21 0 0 0 chr3L 16751842 16751863 -7791694 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 23 54 0 0 chr3L 16755404 16755441 -7788116 + AT_rich Low_complexity Low_complexity 1 37 0 3 712 21 57 0 0 chr3L 16758491 16758526 -7785031 + AT_rich Low_complexity Low_complexity 1 35 0 3 712 25 0 0 0 chr3L 16763512 16763537 -7780020 + AT_rich Low_complexity Low_complexity 1 25 0 3 712 21 36 0 0 chr3L 16763670 16763698 -7779859 + AT_rich Low_complexity Low_complexity 1 28 0 3 712 21 0 0 0 chr3L 16769736 16769757 -7773800 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 22 0 0 0 chr3L 16772881 16772903 -7770654 + AT_rich Low_complexity Low_complexity 1 22 0 3 712 24 32 0 0 chr3L 16773007 16773038 -7770519 + AT_rich Low_complexity Low_complexity 1 31 0 3 712 217 227 0 0 chr3L 16773618 16773662 -7769895 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 712 28 61 0 0 chr3L 16774235 16774284 -7769273 + AT_rich Low_complexity Low_complexity 1 49 0 3 713 21 0 0 0 chr3L 16780130 16780151 -7763406 + AT_rich Low_complexity Low_complexity 1 21 0 3 713 21 36 0 0 chr3L 16780458 16780486 -7763071 + AT_rich Low_complexity Low_complexity 1 28 0 3 713 243 0 0 0 chr3L 16781238 16781265 -7762292 + (CAT)n Simple_repeat Simple_repeat 1 27 0 3 713 182 91 30 0 chr3L 16784959 16784992 -7758565 + (GAGTG)n Simple_repeat Simple_repeat 2 35 0 3 713 24 0 0 0 chr3L 16787800 16787824 -7755733 + AT_rich Low_complexity Low_complexity 1 24 0 3 713 22 35 0 0 chr3L 16790839 16790868 -7752689 + AT_rich Low_complexity Low_complexity 1 29 0 3 713 27 0 0 0 chr3L 16791227 16791254 -7752303 + AT_rich Low_complexity Low_complexity 1 27 0 3 713 25 31 0 0 chr3L 16793540 16793572 -7749985 + AT_rich Low_complexity Low_complexity 1 32 0 3 713 216 0 0 0 chr3L 16794480 16794504 -7749053 + (A)n Simple_repeat Simple_repeat 1 24 0 3 713 32 57 0 0 chr3L 16800021 16800074 -7743483 + AT_rich Low_complexity Low_complexity 1 53 0 3 713 25 0 0 0 chr3L 16800976 16801001 -7742556 + AT_rich Low_complexity Low_complexity 1 25 0 3 713 21 0 0 0 chr3L 16803015 16803036 -7740521 + AT_rich Low_complexity Low_complexity 1 21 0 3 713 21 0 0 0 chr3L 16807695 16807716 -7735841 + AT_rich Low_complexity Low_complexity 1 21 0 3 713 244 200 33 0 chr3L 16808702 16808762 -7734795 + (GAGTG)n Simple_repeat Simple_repeat 1 62 0 3 713 26 0 0 0 chr3L 16810413 16810439 -7733118 + AT_rich Low_complexity Low_complexity 1 26 0 3 713 23 0 0 0 chr3L 16812841 16812864 -7730693 + AT_rich Low_complexity Low_complexity 1 23 0 3 713 28 29 0 0 chr3L 16813284 16813319 -7730238 + AT_rich Low_complexity Low_complexity 1 35 0 3 713 28 71 0 0 chr3L 16814971 16815027 -7728530 + AT_rich Low_complexity Low_complexity 1 56 0 3 713 185 0 40 0 chr3L 16815077 16815102 -7728455 + (CATAA)n Simple_repeat Simple_repeat 5 30 0 3 713 39 92 0 0 chr3L 16817622 16817731 -7725826 + AT_rich Low_complexity Low_complexity 1 109 0 3 713 186 43 0 0 chr3L 16818127 16818150 -7725407 + (GGGAGA)n Simple_repeat Simple_repeat 1 23 0 3 713 38 81 0 0 chr3L 16818289 16818376 -7725181 + AT_rich Low_complexity Low_complexity 1 87 0 3 713 31 0 0 0 chr3L 16819565 16819596 -7723961 + AT_rich Low_complexity Low_complexity 1 31 0 3 713 35 54 0 0 chr3L 16820838 16820894 -7722663 + AT_rich Low_complexity Low_complexity 1 56 0 3 713 189 0 0 0 chr3L 16821526 16821547 -7722010 + (T)n Simple_repeat Simple_repeat 1 21 0 3 713 255 31 0 0 chr3L 16822247 16822279 -7721278 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 713 31 76 0 0 chr3L 16822567 16822633 -7720924 + AT_rich Low_complexity Low_complexity 1 66 0 3 713 267 114 0 0 chr3L 16823202 16823246 -7720311 + (GGGAGA)n Simple_repeat Simple_repeat 4 47 0 3 713 21 36 0 0 chr3L 16826333 16826361 -7717196 + AT_rich Low_complexity Low_complexity 1 28 0 3 713 60 27 0 0 chr3L 16826435 16826509 -7717048 + AT_rich Low_complexity Low_complexity 1 74 0 3 713 23 0 0 0 chr3L 16827061 16827084 -7716473 + AT_rich Low_complexity Low_complexity 1 23 0 3 713 294 87 0 0 chr3L 16828136 16828182 -7715375 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 713 21 36 0 0 chr3L 16829798 16829826 -7713731 + AT_rich Low_complexity Low_complexity 1 28 0 3 713 207 0 0 0 chr3L 16834058 16834081 -7709476 + (CAGC)n Simple_repeat Simple_repeat 1 23 0 3 713 191 145 0 46 chr3L 16838168 16838233 -7705324 + T-rich Low_complexity Low_complexity 1 62 0 3 713 22 0 0 0 chr3L 16838234 16838256 -7705301 + AT_rich Low_complexity Low_complexity 1 22 0 3 713 230 139 125 12 chr3L 16840698 16840778 -7702779 + ROO_I LTR Pao 639 727 -7529 3 713 238 191 42 42 chr3L 16844794 16844865 -7698692 + TART_B1 LINE telomeric 122 192 -10462 3 713 273 147 8 136 chr3L 16844857 16844975 -7698582 + ROO_I LTR Pao 641 743 -7513 3 713 21 0 0 0 chr3L 16846522 16846543 -7697014 + AT_rich Low_complexity Low_complexity 1 21 0 3 713 25 65 0 0 chr3L 16846573 16846619 -7696938 + AT_rich Low_complexity Low_complexity 1 46 0 3 713 182 150 25 0 chr3L 16847116 16847156 -7696401 + (CAA)n Simple_repeat Simple_repeat 1 41 0 3 713 21 36 0 0 chr3L 16855980 16856008 -7687549 + AT_rich Low_complexity Low_complexity 1 28 0 3 713 22 70 0 0 chr3L 16858146 16858189 -7685368 + AT_rich Low_complexity Low_complexity 1 43 0 3 713 207 282 0 40 chr3L 16858746 16858820 -7684737 + (CGTG)n Simple_repeat Simple_repeat 3 73 0 3 713 26 82 0 0 chr3L 16859516 16859577 -7683980 + AT_rich Low_complexity Low_complexity 1 61 0 3 713 28 71 0 0 chr3L 16863935 16863991 -7679566 + AT_rich Low_complexity Low_complexity 1 56 0 3 713 48 0 0 0 chr3L 16868548 16868596 -7674961 + AT_rich Low_complexity Low_complexity 1 48 0 3 713 21 95 0 0 chr3L 16869678 16869741 -7673816 + AT_rich Low_complexity Low_complexity 1 63 0 3 713 24 32 0 0 chr3L 16869808 16869839 -7673718 + AT_rich Low_complexity Low_complexity 1 31 0 3 713 189 74 0 0 chr3L 16872062 16872089 -7671468 + (CCA)n Simple_repeat Simple_repeat 1 27 0 3 713 35 41 0 0 chr3L 16873097 16873146 -7670411 + AT_rich Low_complexity Low_complexity 1 49 0 3 713 31 58 0 0 chr3L 16874505 16874557 -7669000 + AT_rich Low_complexity Low_complexity 1 52 0 3 713 22 80 0 0 chr3L 16876722 16876772 -7666785 + AT_rich Low_complexity Low_complexity 1 50 0 3 713 203 135 54 0 chr3L 16879441 16879478 -7664079 + (ACTG)n Simple_repeat Simple_repeat 3 41 0 3 713 204 200 0 0 chr3L 16879489 16879534 -7664023 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 713 186 43 0 0 chr3L 16881699 16881722 -7661835 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 3 713 27 29 0 0 chr3L 16884434 16884468 -7659089 + AT_rich Low_complexity Low_complexity 1 34 0 3 713 189 0 0 0 chr3L 16884637 16884658 -7658899 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3 713 225 0 0 0 chr3L 16888770 16888795 -7654762 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 713 21 0 0 0 chr3L 16888975 16888996 -7654561 + AT_rich Low_complexity Low_complexity 1 21 0 3 713 23 33 0 0 chr3L 16891406 16891436 -7652121 + AT_rich Low_complexity Low_complexity 1 30 0 3 713 22 0 0 0 chr3L 16892162 16892184 -7651373 + AT_rich Low_complexity Low_complexity 1 22 0 3 713 224 152 0 21 chr3L 16899932 16899979 -7643578 + (CAAGC)n Simple_repeat Simple_repeat 2 47 0 3 713 216 0 0 0 chr3L 16902188 16902212 -7641345 + (TTG)n Simple_repeat Simple_repeat 2 25 0 3 713 202 100 38 57 chr3L 16902462 16902515 -7641042 + (TTA)n Simple_repeat Simple_repeat 1 52 0 3 713 204 265 0 0 chr3L 16907513 16907562 -7635995 + (CCCGA)n Simple_repeat Simple_repeat 5 53 0 3 713 186 43 0 0 chr3L 16907982 16908005 -7635552 + (T)n Simple_repeat Simple_repeat 1 23 0 3 714 195 42 0 0 chr3L 16914902 16914926 -7628631 + (ATG)n Simple_repeat Simple_repeat 3 26 0 3 714 24 77 0 0 chr3L 16915887 16915939 -7627618 + AT_rich Low_complexity Low_complexity 1 52 0 3 714 183 80 0 0 chr3L 16916207 16916232 -7627325 + (CAAGC)n Simple_repeat Simple_repeat 4 28 0 3 714 27 0 0 0 chr3L 16917047 16917074 -7626483 + AT_rich Low_complexity Low_complexity 1 27 0 3 714 30 0 0 0 chr3L 16917292 16917322 -7626235 + AT_rich Low_complexity Low_complexity 1 30 0 3 714 26 50 0 0 chr3L 16919150 16919190 -7624367 + AT_rich Low_complexity Low_complexity 1 40 0 3 714 36 0 0 0 chr3L 16920023 16920059 -7623498 + AT_rich Low_complexity Low_complexity 1 36 0 3 714 21 0 0 0 chr3L 16920119 16920140 -7623417 + AT_rich Low_complexity Low_complexity 1 21 0 3 714 25 65 0 0 chr3L 16934511 16934557 -7609000 + AT_rich Low_complexity Low_complexity 1 46 0 3 714 183 129 0 0 chr3L 16934854 16934885 -7608672 + (CAG)n Simple_repeat Simple_repeat 2 32 0 3 714 31 58 0 0 chr3L 16938474 16938526 -7605031 + AT_rich Low_complexity Low_complexity 1 52 0 3 714 3964 2 0 2 chr3L 16938882 16939311 -7604246 + ROO_LTR LTR Pao 1 428 0 3 714 48500 1 2 0 chr3L 16939311 16947548 -7596009 + ROO_I LTR Pao 1 8256 0 3 714 3964 2 0 2 chr3L 16947548 16947977 -7595580 + ROO_LTR LTR Pao 1 428 0 3 714 284 0 28 0 chr3L 16948304 16948340 -7595217 + (TAA)n Simple_repeat Simple_repeat 2 38 0 3 714 204 135 0 0 chr3L 16954535 16954572 -7588985 + (CCA)n Simple_repeat Simple_repeat 1 37 0 3 714 21 0 0 0 chr3L 16955001 16955022 -7588535 + AT_rich Low_complexity Low_complexity 1 21 0 3 714 24 67 0 0 chr3L 16958382 16958427 -7585130 + AT_rich Low_complexity Low_complexity 1 45 0 3 714 24 32 0 0 chr3L 16961015 16961046 -7582511 + AT_rich Low_complexity Low_complexity 1 31 0 3 714 255 114 0 0 chr3L 16964590 16964634 -7578923 + (GAGTG)n Simple_repeat Simple_repeat 2 45 0 3 714 27 49 0 0 chr3L 16965262 16965303 -7578254 + AT_rich Low_complexity Low_complexity 1 41 0 3 714 28 61 0 0 chr3L 16966345 16966394 -7577163 + AT_rich Low_complexity Low_complexity 1 49 0 3 714 228 219 26 40 chr3L 16968107 16968183 -7575374 + T-rich Low_complexity Low_complexity 6 80 0 3 714 338 239 0 0 chr3L 16969312 16969404 -7574153 + ROO_I LTR Pao 643 734 -7522 3 714 24 0 0 0 chr3L 16970513 16970537 -7573020 + AT_rich Low_complexity Low_complexity 1 24 0 3 714 260 167 40 27 chr3L 16973840 16973914 -7569643 + ROO_I LTR Pao 660 734 -7522 3 714 23 54 0 0 chr3L 16977120 16977157 -7566400 + AT_rich Low_complexity Low_complexity 1 37 0 3 714 21 36 0 0 chr3L 16978669 16978697 -7564860 + AT_rich Low_complexity Low_complexity 1 28 0 3 714 180 77 0 0 chr3L 16980017 16980043 -7563514 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 714 31 44 0 0 chr3L 16981430 16981475 -7562082 + AT_rich Low_complexity Low_complexity 1 45 0 3 714 26 30 0 0 chr3L 16982378 16982411 -7561146 + AT_rich Low_complexity Low_complexity 1 33 0 3 714 25 51 0 0 chr3L 16987572 16987611 -7555946 + AT_rich Low_complexity Low_complexity 1 39 0 3 714 406 167 0 0 chr3L 16992716 16992782 -7550775 + DNAREP1_DM LINE Penelope 353 418 -176 3 714 219 88 0 0 chr3L 16994425 16994459 -7549098 + (T)n Simple_repeat Simple_repeat 1 34 0 3 714 351 96 0 0 chr3L 16995556 16995608 -7547949 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 714 216 162 0 0 chr3L 16995792 16995829 -7547728 + (CCGAA)n Simple_repeat Simple_repeat 1 37 0 3 714 180 0 0 0 chr3L 16995975 16995995 -7547562 + (TAA)n Simple_repeat Simple_repeat 2 21 0 3 714 32 81 0 0 chr3L 16996328 16996402 -7547155 + AT_rich Low_complexity Low_complexity 1 74 0 3 714 24 0 0 0 chr3L 16996428 16996452 -7547105 + AT_rich Low_complexity Low_complexity 1 24 0 3 714 37 39 0 0 chr3L 17000033 17000084 -7543473 + AT_rich Low_complexity Low_complexity 1 51 0 3 714 21 0 0 0 chr3L 17000218 17000239 -7543318 + AT_rich Low_complexity Low_complexity 1 21 0 3 714 198 0 0 0 chr3L 17001162 17001184 -7542373 + (GTATG)n Simple_repeat Simple_repeat 5 26 0 3 714 26 0 0 0 chr3L 17003705 17003731 -7539826 + AT_rich Low_complexity Low_complexity 1 26 0 3 714 192 184 0 0 chr3L 17004598 17004647 -7538910 + (TTG)n Simple_repeat Simple_repeat 2 50 0 3 714 23 33 0 0 chr3L 17005937 17005967 -7537590 + AT_rich Low_complexity Low_complexity 1 30 0 3 714 22 0 0 0 chr3L 17005974 17005996 -7537561 + AT_rich Low_complexity Low_complexity 1 22 0 3 714 27 0 0 0 chr3L 17009701 17009728 -7533829 + AT_rich Low_complexity Low_complexity 1 27 0 3 714 207 0 0 0 chr3L 17025322 17025345 -7518212 + (GA)n Simple_repeat Simple_repeat 1 23 0 3 714 238 220 0 0 chr3L 17027302 17027352 -7516205 + A-rich Low_complexity Low_complexity 1 50 0 3 714 981 32 0 0 chr3L 17028095 17028219 -7515338 + G2_DM LINE Jockey 2971 3094 -8 3 714 252 154 0 0 chr3L 17031430 17031482 -7512075 + (CTG)n Simple_repeat Simple_repeat 1 52 0 3 714 218 204 0 0 chr3L 17032837 17032886 -7510671 + T-rich Low_complexity Low_complexity 1 49 0 3 715 22 35 0 0 chr3L 17039743 17039772 -7503785 + AT_rich Low_complexity Low_complexity 1 29 0 3 715 22 0 0 0 chr3L 17039846 17039868 -7503689 + AT_rich Low_complexity Low_complexity 1 22 0 3 715 224 131 0 21 chr3L 17041181 17041228 -7502329 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 715 208 139 0 0 chr3L 17041463 17041499 -7502058 + (A)n Simple_repeat Simple_repeat 1 36 0 3 715 30 45 0 0 chr3L 17042063 17042107 -7501450 + AT_rich Low_complexity Low_complexity 1 44 0 3 715 183 42 0 0 chr3L 17042797 17042821 -7500736 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 715 207 114 0 0 chr3L 17042926 17042961 -7500596 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 715 212 115 58 0 chr3L 17047648 17047700 -7495857 + (CTATA)n Simple_repeat Simple_repeat 3 57 0 3 715 23 0 0 0 chr3L 17049584 17049607 -7493950 + AT_rich Low_complexity Low_complexity 1 23 0 3 715 25 51 0 0 chr3L 17051714 17051753 -7491804 + AT_rich Low_complexity Low_complexity 1 39 0 3 715 318 26 0 0 chr3L 17051965 17052004 -7491553 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 715 185 146 21 0 chr3L 17052401 17052449 -7491108 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 715 208 241 0 0 chr3L 17052544 17052598 -7490959 + (TTG)n Simple_repeat Simple_repeat 1 54 0 3 715 21 0 0 0 chr3L 17053659 17053680 -7489877 + AT_rich Low_complexity Low_complexity 1 21 0 3 715 263 248 10 19 chr3L 17053853 17053956 -7489601 + (TG)n Simple_repeat Simple_repeat 2 103 0 3 715 231 205 10 93 chr3L 17054771 17054868 -7488689 + T-rich Low_complexity Low_complexity 6 94 0 3 715 350 134 0 15 chr3L 17055401 17055469 -7488088 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 715 32 0 0 0 chr3L 17055606 17055638 -7487919 + AT_rich Low_complexity Low_complexity 1 32 0 3 715 198 0 0 0 chr3L 17055656 17055678 -7487879 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 715 308 273 7 22 chr3L 17056264 17056399 -7487158 + T-rich Low_complexity Low_complexity 2 134 0 3 715 202 276 0 0 chr3L 17056767 17056825 -7486732 + (CAT)n Simple_repeat Simple_repeat 3 60 0 3 715 221 57 0 28 chr3L 17057756 17057792 -7485765 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 715 198 156 0 0 chr3L 17058258 17058303 -7485254 + (TTG)n Simple_repeat Simple_repeat 2 46 0 3 715 21 0 0 0 chr3L 17058418 17058439 -7485118 + AT_rich Low_complexity Low_complexity 1 21 0 3 715 427 222 22 125 chr3L 17058498 17058606 -7484951 - ROO_I LTR Pao -7426 830 740 3 715 225 119 0 0 chr3L 17058606 17058648 -7484909 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 715 427 222 22 125 chr3L 17058648 17058771 -7484786 - ROO_I LTR Pao -7517 739 623 3 715 208 303 0 11 chr3L 17058895 17058985 -7484572 + (TA)n Simple_repeat Simple_repeat 1 89 0 3 715 21 36 0 0 chr3L 17059514 17059542 -7484015 + AT_rich Low_complexity Low_complexity 1 28 0 3 715 21 57 0 0 chr3L 17059590 17059625 -7483932 + AT_rich Low_complexity Low_complexity 1 35 0 3 715 232 250 26 46 chr3L 17059738 17059889 -7483668 + T-rich Low_complexity Low_complexity 2 149 0 3 715 246 32 0 0 chr3L 17060051 17060082 -7483475 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 715 218 148 0 18 chr3L 17061723 17061778 -7481779 + (CAAAC)n Simple_repeat Simple_repeat 2 55 0 3 715 228 250 0 0 chr3L 17061894 17061954 -7481603 + T-rich Low_complexity Low_complexity 1 60 0 3 715 213 39 0 0 chr3L 17062192 17062218 -7481339 + (CGTAA)n Simple_repeat Simple_repeat 2 27 0 3 715 214 179 0 0 chr3L 17063810 17063849 -7479708 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 715 251 211 26 13 chr3L 17064301 17064378 -7479179 + (TA)n Simple_repeat Simple_repeat 1 78 0 3 715 183 42 0 0 chr3L 17065415 17065439 -7478118 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 715 238 146 0 128 chr3L 17070306 17070400 -7473157 - ROO_I LTR Pao -7524 732 651 3 715 450 120 0 0 chr3L 17070540 17070615 -7472942 + (CTG)n Simple_repeat Simple_repeat 3 77 0 3 715 27 0 0 0 chr3L 17071986 17072013 -7471544 + AT_rich Low_complexity Low_complexity 1 27 0 3 715 22 0 0 0 chr3L 17072662 17072684 -7470873 + AT_rich Low_complexity Low_complexity 1 22 0 3 715 219 238 0 0 chr3L 17074299 17074341 -7469216 + (TCTG)n Simple_repeat Simple_repeat 1 42 0 3 715 225 0 0 0 chr3L 17074347 17074372 -7469185 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 715 330 87 0 0 chr3L 17077917 17077963 -7465594 + (ACTG)n Simple_repeat Simple_repeat 1 46 0 3 715 3969 2 0 2 chr3L 17078159 17078588 -7464969 + ROO_LTR LTR Pao 1 428 0 3 715 75133 1 3 0 chr3L 17078588 17086821 -7456736 + ROO_I LTR Pao 1 8256 0 3 715 3969 2 0 2 chr3L 17086821 17087250 -7456307 + ROO_LTR LTR Pao 1 428 0 3 715 315 96 0 0 chr3L 17090964 17091016 -7452541 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 715 234 0 0 0 chr3L 17092468 17092494 -7451063 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 715 366 61 0 0 chr3L 17093079 17093128 -7450429 + (GCTG)n Simple_repeat Simple_repeat 3 51 0 3 715 195 167 0 0 chr3L 17093583 17093625 -7449932 + CT-rich Low_complexity Low_complexity 2 43 0 3 715 273 29 0 0 chr3L 17093638 17093672 -7449885 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 715 249 159 0 0 chr3L 17095279 17095323 -7448234 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 715 24 32 0 0 chr3L 17095930 17095961 -7447596 + AT_rich Low_complexity Low_complexity 1 31 0 3 715 189 0 0 0 chr3L 17097977 17097998 -7445559 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 715 200 163 0 23 chr3L 17099853 17099897 -7443660 + CT-rich Low_complexity Low_complexity 3 45 0 3 715 26 0 0 0 chr3L 17101301 17101327 -7442230 + AT_rich Low_complexity Low_complexity 1 26 0 3 715 225 0 0 0 chr3L 17101483 17101508 -7442049 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 715 288 53 0 0 chr3L 17103767 17103805 -7439752 + (CAG)n Simple_repeat Simple_repeat 2 39 0 3 715 210 231 0 30 chr3L 17103898 17103965 -7439592 + (TCTG)n Simple_repeat Simple_repeat 3 67 0 3 715 201 94 0 0 chr3L 17105014 17105046 -7438511 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 715 219 254 17 0 chr3L 17105849 17105908 -7437649 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 715 207 218 0 0 chr3L 17106005 17106060 -7437497 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3 715 30 45 0 0 chr3L 17106472 17106516 -7437041 + AT_rich Low_complexity Low_complexity 1 44 0 3 715 21 0 0 0 chr3L 17109243 17109264 -7434293 + AT_rich Low_complexity Low_complexity 1 21 0 3 715 25 0 0 0 chr3L 17112802 17112827 -7430730 + AT_rich Low_complexity Low_complexity 1 25 0 3 715 251 191 0 14 chr3L 17113353 17113422 -7430135 + (CGAAA)n Simple_repeat Simple_repeat 3 70 0 3 715 24 0 0 0 chr3L 17113821 17113845 -7429712 + AT_rich Low_complexity Low_complexity 1 24 0 3 715 21 0 0 0 chr3L 17115050 17115071 -7428486 + AT_rich Low_complexity Low_complexity 1 21 0 3 715 210 245 0 0 chr3L 17116248 17116297 -7427260 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 715 189 74 0 0 chr3L 17116339 17116366 -7427191 + (CTG)n Simple_repeat Simple_repeat 1 27 0 3 715 234 91 0 0 chr3L 17117157 17117190 -7426367 + (TGGA)n Simple_repeat Simple_repeat 3 35 0 3 715 213 216 0 0 chr3L 17117674 17117725 -7425832 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 715 207 100 0 0 chr3L 17117838 17117868 -7425689 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 715 186 71 0 0 chr3L 17118966 17118994 -7424563 + (CAG)n Simple_repeat Simple_repeat 3 30 0 3 715 189 0 0 0 chr3L 17119082 17119103 -7424454 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 715 192 143 0 0 chr3L 17120518 17120560 -7422997 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 715 203 231 0 0 chr3L 17122252 17122291 -7421266 + C-rich Low_complexity Low_complexity 4 42 0 3 715 247 196 0 0 chr3L 17122409 17122460 -7421097 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 715 24 32 0 0 chr3L 17123007 17123038 -7420519 + AT_rich Low_complexity Low_complexity 1 31 0 3 715 211 200 0 0 chr3L 17123140 17123190 -7420367 + GA-rich Low_complexity Low_complexity 1 50 0 3 715 27 0 0 0 chr3L 17124132 17124159 -7419398 + AT_rich Low_complexity Low_complexity 1 27 0 3 715 191 125 25 0 chr3L 17125691 17125731 -7417826 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 715 206 227 23 0 chr3L 17126124 17126168 -7417389 + (CTCCG)n Simple_repeat Simple_repeat 2 46 0 3 715 250 237 0 13 chr3L 17127458 17127535 -7416022 + (CA)n Simple_repeat Simple_repeat 1 76 0 3 715 255 173 0 0 chr3L 17128025 17128077 -7415480 + (AACTG)n Simple_repeat Simple_repeat 5 56 0 3 715 212 111 0 22 chr3L 17129218 17129264 -7414293 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 715 219 36 0 0 chr3L 17131361 17131389 -7412168 + (CGAAA)n Simple_repeat Simple_repeat 4 31 0 3 715 210 150 0 0 chr3L 17131788 17131828 -7411729 + (CTG)n Simple_repeat Simple_repeat 1 40 0 3 715 183 129 0 0 chr3L 17131828 17131859 -7411698 + (ACTG)n Simple_repeat Simple_repeat 2 32 0 3 715 204 240 0 0 chr3L 17132654 17132704 -7410853 + A-rich Low_complexity Low_complexity 1 50 0 3 715 189 107 0 0 chr3L 17133042 17133070 -7410487 + (CTG)n Simple_repeat Simple_repeat 1 28 0 3 715 207 184 0 0 chr3L 17133429 17133467 -7410090 + (TTCGG)n Simple_repeat Simple_repeat 3 40 0 3 715 30 45 0 0 chr3L 17134710 17134754 -7408803 + AT_rich Low_complexity Low_complexity 1 44 0 3 715 27 62 0 0 chr3L 17137203 17137251 -7406306 + AT_rich Low_complexity Low_complexity 1 48 0 3 715 308 289 0 0 chr3L 17139631 17139728 -7403829 + A-rich Low_complexity Low_complexity 1 97 0 3 715 254 240 13 13 chr3L 17140228 17140304 -7403253 + (CGG)n Simple_repeat Simple_repeat 3 78 0 3 715 180 152 0 0 chr3L 17140837 17140870 -7402687 + T-rich Low_complexity Low_complexity 4 36 0 3 715 186 133 0 0 chr3L 17142756 17142786 -7400771 + (CAT)n Simple_repeat Simple_repeat 1 30 0 3 715 229 204 0 0 chr3L 17142903 17142947 -7400610 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 715 243 0 0 0 chr3L 17144181 17144208 -7399349 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 715 227 204 0 0 chr3L 17144579 17144623 -7398934 + (AGTTG)n Simple_repeat Simple_repeat 3 46 0 3 715 189 0 0 0 chr3L 17146583 17146604 -7396953 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 715 225 0 0 0 chr3L 17148297 17148322 -7395235 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 715 239 220 0 0 chr3L 17150296 17150346 -7393211 + (CAG)n Simple_repeat Simple_repeat 1 50 0 3 715 189 154 0 0 chr3L 17150755 17150794 -7392763 + (CAAAC)n Simple_repeat Simple_repeat 5 43 0 3 715 23 0 0 0 chr3L 17153166 17153189 -7390368 + AT_rich Low_complexity Low_complexity 1 23 0 3 715 201 132 0 0 chr3L 17153582 17153620 -7389937 + (CAGTT)n Simple_repeat Simple_repeat 3 40 0 3 715 245 243 0 14 chr3L 17153885 17153956 -7389601 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 715 33 90 0 0 chr3L 17155438 17155527 -7388030 + AT_rich Low_complexity Low_complexity 1 89 0 3 715 24 0 0 0 chr3L 17156365 17156389 -7387168 + AT_rich Low_complexity Low_complexity 1 24 0 3 715 232 287 11 11 chr3L 17156669 17156757 -7386800 + (TG)n Simple_repeat Simple_repeat 1 88 0 3 715 24 53 0 0 chr3L 17158396 17158434 -7385123 + AT_rich Low_complexity Low_complexity 1 38 0 3 715 327 96 0 0 chr3L 17164040 17164092 -7379465 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 715 180 125 0 0 chr3L 17166363 17166395 -7377162 + (TTTCG)n Simple_repeat Simple_repeat 3 34 0 3 715 33 66 0 0 chr3L 17166888 17166949 -7376608 + AT_rich Low_complexity Low_complexity 1 61 0 3 715 225 0 0 0 chr3L 17169160 17169185 -7374372 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 715 191 125 25 0 chr3L 17169407 17169447 -7374110 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 715 186 167 0 0 chr3L 17169624 17169660 -7373897 + (CAG)n Simple_repeat Simple_repeat 3 38 0 3 715 26 30 0 0 chr3L 17170243 17170276 -7373281 + AT_rich Low_complexity Low_complexity 1 33 0 3 716 32 0 0 0 chr3L 17173914 17173946 -7369611 + AT_rich Low_complexity Low_complexity 1 32 0 3 716 247 282 0 41 chr3L 17175336 17175458 -7368099 + A-rich Low_complexity Low_complexity 3 119 0 3 716 25 0 0 0 chr3L 17175482 17175507 -7368050 + AT_rich Low_complexity Low_complexity 1 25 0 3 716 29 60 0 0 chr3L 17176615 17176665 -7366892 + AT_rich Low_complexity Low_complexity 1 50 0 3 716 213 39 0 0 chr3L 17177107 17177133 -7366424 + (TTCCG)n Simple_repeat Simple_repeat 2 27 0 3 716 21 57 0 0 chr3L 17179318 17179353 -7364204 + AT_rich Low_complexity Low_complexity 1 35 0 3 716 198 0 0 0 chr3L 17179915 17179937 -7363620 + (TAA)n Simple_repeat Simple_repeat 3 24 0 3 716 198 118 0 0 chr3L 17179954 17179988 -7363569 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 3 716 219 178 0 22 chr3L 17181875 17181921 -7361636 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 3 716 29 47 0 0 chr3L 17183149 17183192 -7360365 + AT_rich Low_complexity Low_complexity 1 43 0 3 716 186 143 0 0 chr3L 17185337 17185372 -7358185 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 716 23 0 0 0 chr3L 17185700 17185723 -7357834 + AT_rich Low_complexity Low_complexity 1 23 0 3 716 216 111 0 0 chr3L 17189816 17189852 -7353705 + (TGGA)n Simple_repeat Simple_repeat 3 38 0 3 716 28 0 0 0 chr3L 17192114 17192142 -7351415 + AT_rich Low_complexity Low_complexity 1 28 0 3 716 273 167 0 0 chr3L 17192518 17192572 -7350985 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 716 23 0 0 0 chr3L 17193252 17193275 -7350282 + AT_rich Low_complexity Low_complexity 1 23 0 3 716 23 0 0 0 chr3L 17194134 17194157 -7349400 + AT_rich Low_complexity Low_complexity 1 23 0 3 716 197 108 27 0 chr3L 17195898 17195935 -7347622 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 716 40 59 0 0 chr3L 17197608 17197676 -7345881 + AT_rich Low_complexity Low_complexity 1 68 0 3 716 222 105 0 0 chr3L 17198089 17198127 -7345430 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 716 203 188 20 20 chr3L 17199177 17199226 -7344331 + (CTTCG)n Simple_repeat Simple_repeat 4 52 0 3 716 186 118 0 0 chr3L 17200227 17200261 -7343296 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 716 22 35 0 0 chr3L 17200764 17200793 -7342764 + AT_rich Low_complexity Low_complexity 1 29 0 3 716 216 143 0 0 chr3L 17201432 17201474 -7342083 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 716 301 261 0 0 chr3L 17205262 17205331 -7338226 + (CAG)n Simple_repeat Simple_repeat 1 69 0 3 716 212 195 24 0 chr3L 17205624 17205665 -7337892 + (CATA)n Simple_repeat Simple_repeat 1 42 0 3 716 237 33 0 0 chr3L 17207932 17207962 -7335595 + (TAA)n Simple_repeat Simple_repeat 3 32 0 3 716 189 0 0 0 chr3L 17208567 17208588 -7334969 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 716 21 71 0 0 chr3L 17209020 17209062 -7334495 + AT_rich Low_complexity Low_complexity 1 42 0 3 716 180 0 0 0 chr3L 17211112 17211132 -7332425 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 3 716 207 0 0 0 chr3L 17211132 17211155 -7332402 + (TAA)n Simple_repeat Simple_repeat 2 24 0 3 716 264 137 0 0 chr3L 17212214 17212265 -7331292 + (CAGCT)n Simple_repeat Simple_repeat 1 51 0 3 716 213 39 0 0 chr3L 17213809 17213835 -7329722 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 716 25 51 0 0 chr3L 17215671 17215710 -7327847 + AT_rich Low_complexity Low_complexity 1 39 0 3 716 235 160 20 0 chr3L 17217646 17217696 -7325861 + (TGGG)n Simple_repeat Simple_repeat 2 52 0 3 716 212 59 0 29 chr3L 17218650 17218685 -7324872 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 3 716 36 0 0 0 chr3L 17219596 17219632 -7323925 + AT_rich Low_complexity Low_complexity 1 36 0 3 716 183 139 0 0 chr3L 17219726 17219762 -7323795 + (CACCAT)n Simple_repeat Simple_repeat 4 39 0 3 716 25 51 0 0 chr3L 17221202 17221241 -7322316 + AT_rich Low_complexity Low_complexity 1 39 0 3 716 187 93 47 0 chr3L 17222093 17222136 -7321421 + (TATAA)n Simple_repeat Simple_repeat 4 48 0 3 716 213 167 0 0 chr3L 17222429 17222483 -7321074 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 716 26 0 0 0 chr3L 17224211 17224237 -7319320 + AT_rich Low_complexity Low_complexity 1 26 0 3 716 244 238 0 24 chr3L 17225696 17225778 -7317779 + T-rich Low_complexity Low_complexity 1 80 0 3 716 22 0 0 0 chr3L 17227199 17227221 -7316336 + AT_rich Low_complexity Low_complexity 1 22 0 3 716 210 239 13 53 chr3L 17228537 17228612 -7314945 + (TTGGGG)n Simple_repeat Simple_repeat 2 73 0 3 716 203 259 0 0 chr3L 17230158 17230212 -7313345 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 716 204 158 0 0 chr3L 17231396 17231434 -7312123 + (CTG)n Simple_repeat Simple_repeat 3 40 0 3 716 27 49 0 0 chr3L 17235304 17235345 -7308212 + AT_rich Low_complexity Low_complexity 1 41 0 3 716 2867 134 11 27 chr3L 17235636 17236159 -7307398 + FB4_DM DNA Tc1 1125 1639 -2450 3 716 509 145 24 0 chr3L 17236161 17236244 -7307313 + FB4_DM DNA Tc1 2363 2447 -1642 3 716 229 69 0 0 chr3L 17236247 17236276 -7307281 - FB4_DM DNA Tc1 -2951 1138 1110 3 716 2203 132 48 3 chr3L 17238141 17238520 -7305037 - FB4_DM DNA Tc1 -1331 2758 2363 3 716 1642 106 70 20 chr3L 17238521 17238702 -7304855 - FB4_DM DNA Tc1 -2449 1640 1454 3 716 180 0 0 0 chr3L 17238702 17238722 -7304835 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3 716 1642 106 70 20 chr3L 17238722 17238838 -7304719 - FB4_DM DNA Tc1 -2636 1453 1328 3 716 482 196 100 14 chr3L 17239362 17239502 -7304055 - DNAREP1_DM LINE Penelope -17 577 426 3 716 27 0 0 0 chr3L 17239511 17239538 -7304019 + AT_rich Low_complexity Low_complexity 1 27 0 3 716 25 0 0 0 chr3L 17239890 17239915 -7303642 + AT_rich Low_complexity Low_complexity 1 25 0 3 716 219 241 0 0 chr3L 17241037 17241095 -7302462 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 716 264 30 0 0 chr3L 17242380 17242413 -7301144 + (CACCG)n Simple_repeat Simple_repeat 2 34 0 3 716 226 152 22 0 chr3L 17242497 17242543 -7301014 + (CGGGG)n Simple_repeat Simple_repeat 3 49 0 3 716 220 164 36 0 chr3L 17243607 17243662 -7299895 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 716 25 51 0 0 chr3L 17243936 17243975 -7299582 + AT_rich Low_complexity Low_complexity 1 39 0 3 716 26 30 0 0 chr3L 17244148 17244181 -7299376 + AT_rich Low_complexity Low_complexity 1 33 0 3 716 201 94 0 0 chr3L 17244498 17244530 -7299027 + (T)n Simple_repeat Simple_repeat 1 32 0 3 716 215 260 0 0 chr3L 17244741 17244791 -7298766 + A-rich Low_complexity Low_complexity 1 50 0 3 716 261 234 109 120 chr3L 17245288 17245463 -7298094 - DNAREP1_DM LINE Penelope -119 475 303 3 716 266 293 0 0 chr3L 17245932 17246056 -7297501 + (CTG)n Simple_repeat Simple_repeat 1 124 0 3 716 27 29 0 0 chr3L 17247154 17247188 -7296369 + AT_rich Low_complexity Low_complexity 1 34 0 3 716 192 97 0 0 chr3L 17248154 17248185 -7295372 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 716 41 48 0 0 chr3L 17248471 17248533 -7295024 + AT_rich Low_complexity Low_complexity 1 62 0 3 716 228 122 0 0 chr3L 17249891 17249932 -7293625 + (CGAAT)n Simple_repeat Simple_repeat 4 44 0 3 716 38 39 0 0 chr3L 17251332 17251384 -7292173 + AT_rich Low_complexity Low_complexity 1 52 0 3 716 25 31 0 0 chr3L 17255564 17255596 -7287961 + AT_rich Low_complexity Low_complexity 1 32 0 3 716 21 36 0 0 chr3L 17256823 17256851 -7286706 + AT_rich Low_complexity Low_complexity 1 28 0 3 716 34 72 0 0 chr3L 17256865 17256934 -7286623 + AT_rich Low_complexity Low_complexity 1 69 0 3 716 234 62 0 0 chr3L 17258140 17258172 -7285385 + (T)n Simple_repeat Simple_repeat 1 32 0 3 716 258 105 0 0 chr3L 17258367 17258405 -7285152 + (TATG)n Simple_repeat Simple_repeat 2 39 0 3 716 207 189 0 0 chr3L 17258449 17258486 -7285071 + (TTTCG)n Simple_repeat Simple_repeat 4 40 0 3 716 234 193 0 0 chr3L 17260475 17260532 -7283025 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 716 216 111 0 0 chr3L 17261582 17261618 -7281939 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 716 222 222 0 0 chr3L 17262974 17263028 -7280529 + A-rich Low_complexity Low_complexity 1 54 0 3 716 252 100 0 0 chr3L 17263201 17263241 -7280316 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 716 22 80 0 0 chr3L 17264247 17264297 -7279260 + AT_rich Low_complexity Low_complexity 1 50 0 3 716 183 114 0 0 chr3L 17266875 17266910 -7276647 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 716 207 125 0 0 chr3L 17267781 17267821 -7275736 + (A)n Simple_repeat Simple_repeat 1 40 0 3 716 229 241 0 17 chr3L 17268420 17268479 -7275078 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 3 716 243 152 0 0 chr3L 17270733 17270779 -7272778 + (GAGTG)n Simple_repeat Simple_repeat 3 48 0 3 716 252 200 0 0 chr3L 17270857 17270912 -7272645 + (CAGCT)n Simple_repeat Simple_repeat 4 58 0 3 716 189 0 0 0 chr3L 17271018 17271039 -7272518 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 716 36 23 0 0 chr3L 17271421 17271464 -7272093 + AT_rich Low_complexity Low_complexity 1 43 0 3 716 354 91 0 0 chr3L 17273622 17273677 -7269880 + (ACTG)n Simple_repeat Simple_repeat 1 55 0 3 716 22 56 0 0 chr3L 17279454 17279490 -7264067 + AT_rich Low_complexity Low_complexity 1 36 0 3 716 270 136 0 0 chr3L 17280906 17280950 -7262607 + (ATGGTG)n Simple_repeat Simple_repeat 4 47 0 3 716 237 108 0 0 chr3L 17281110 17281147 -7262410 + (A)n Simple_repeat Simple_repeat 1 37 0 3 716 209 176 0 0 chr3L 17282057 17282091 -7261466 + (AGCTG)n Simple_repeat Simple_repeat 3 36 0 3 716 192 200 0 0 chr3L 17282526 17282576 -7260981 + (TGGA)n Simple_repeat Simple_repeat 2 51 0 3 716 239 114 0 22 chr3L 17283162 17283207 -7260350 + (TTTCC)n Simple_repeat Simple_repeat 2 45 0 3 716 210 37 0 0 chr3L 17284137 17284164 -7259393 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 716 22 0 0 0 chr3L 17286420 17286442 -7257115 + AT_rich Low_complexity Low_complexity 1 22 0 3 716 223 320 0 10 chr3L 17289264 17289365 -7254192 + (CTG)n Simple_repeat Simple_repeat 1 100 0 3 716 22 0 0 0 chr3L 17289570 17289592 -7253965 + AT_rich Low_complexity Low_complexity 1 22 0 3 716 267 31 0 0 chr3L 17290648 17290680 -7252877 + (CAGT)n Simple_repeat Simple_repeat 3 34 0 3 716 216 67 0 0 chr3L 17291616 17291646 -7251911 + (CATCT)n Simple_repeat Simple_repeat 1 30 0 3 716 201 39 0 0 chr3L 17292036 17292062 -7251495 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 716 211 211 0 0 chr3L 17294142 17294180 -7249377 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 716 291 54 0 0 chr3L 17294614 17294651 -7248906 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 716 300 70 0 0 chr3L 17297146 17297189 -7246368 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 717 27 73 0 0 chr3L 17301888 17301943 -7241614 + AT_rich Low_complexity Low_complexity 1 55 0 3 717 22 0 0 0 chr3L 17303316 17303338 -7240219 + AT_rich Low_complexity Low_complexity 1 22 0 3 717 39 22 0 0 chr3L 17303816 17303862 -7239695 + AT_rich Low_complexity Low_complexity 1 46 0 3 717 24 0 0 0 chr3L 17306506 17306530 -7237027 + AT_rich Low_complexity Low_complexity 1 24 0 3 717 189 254 0 0 chr3L 17307730 17307785 -7235772 + (CATATA)n Simple_repeat Simple_repeat 3 57 0 3 717 185 154 26 0 chr3L 17307835 17307874 -7235683 + (CACCAT)n Simple_repeat Simple_repeat 4 43 0 3 717 23 0 0 0 chr3L 17312737 17312760 -7230797 + AT_rich Low_complexity Low_complexity 1 23 0 3 717 315 181 0 0 chr3L 17316693 17316765 -7226792 + GA-rich Low_complexity Low_complexity 2 73 0 3 717 27 49 0 0 chr3L 17319974 17320015 -7223542 + AT_rich Low_complexity Low_complexity 1 41 0 3 717 31 0 0 60 chr3L 17328727 17328777 -7214780 + AT_rich Low_complexity Low_complexity 1 47 0 3 717 288 0 0 0 chr3L 17329610 17329642 -7213915 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 717 24 77 0 0 chr3L 17332525 17332577 -7210980 + AT_rich Low_complexity Low_complexity 1 52 0 3 717 29 70 0 0 chr3L 17332804 17332861 -7210696 + AT_rich Low_complexity Low_complexity 1 57 0 3 717 44 35 0 0 chr3L 17332924 17332982 -7210575 + AT_rich Low_complexity Low_complexity 1 58 0 3 717 38 0 0 0 chr3L 17333233 17333271 -7210286 + AT_rich Low_complexity Low_complexity 1 38 0 3 717 21 36 0 0 chr3L 17333314 17333342 -7210215 + AT_rich Low_complexity Low_complexity 1 28 0 3 717 21 0 0 0 chr3L 17335043 17335064 -7208493 + AT_rich Low_complexity Low_complexity 1 21 0 3 717 24 0 0 0 chr3L 17336667 17336691 -7206866 + AT_rich Low_complexity Low_complexity 1 24 0 3 717 200 184 0 0 chr3L 17338755 17338793 -7204764 + (CTG)n Simple_repeat Simple_repeat 1 38 0 3 717 33 25 0 0 chr3L 17339166 17339206 -7204351 + AT_rich Low_complexity Low_complexity 1 40 0 3 717 24 0 0 0 chr3L 17342136 17342160 -7201397 + AT_rich Low_complexity Low_complexity 1 24 0 3 717 225 0 0 0 chr3L 17342857 17342882 -7200675 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 717 201 94 0 0 chr3L 17343033 17343065 -7200492 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 717 226 38 75 19 chr3L 17343539 17343592 -7199965 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 717 24 0 0 0 chr3L 17345866 17345890 -7197667 + AT_rich Low_complexity Low_complexity 1 24 0 3 717 342 100 0 0 chr3L 17351180 17351240 -7192317 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 717 31 68 0 0 chr3L 17352199 17352258 -7191299 + AT_rich Low_complexity Low_complexity 1 59 0 3 717 21 0 0 0 chr3L 17361108 17361129 -7182428 + AT_rich Low_complexity Low_complexity 1 21 0 3 717 26 74 0 0 chr3L 17367313 17367367 -7176190 + AT_rich Low_complexity Low_complexity 1 54 0 3 717 242 220 0 0 chr3L 17370026 17370085 -7173472 + A-rich Low_complexity Low_complexity 1 59 0 3 717 24 0 0 0 chr3L 17371341 17371365 -7172192 + AT_rich Low_complexity Low_complexity 1 24 0 3 717 22 0 0 0 chr3L 17373143 17373165 -7170392 + AT_rich Low_complexity Low_complexity 1 22 0 3 717 195 188 0 0 chr3L 17373609 17373657 -7169900 + (CTG)n Simple_repeat Simple_repeat 3 50 0 3 717 231 235 0 29 chr3L 17374270 17374340 -7169217 - Gypsy11_I LTR Gypsy -2937 587 520 3 717 303 154 39 0 chr3L 17374303 17374381 -7169176 - ROO_I LTR Pao -7534 722 642 3 717 280 238 0 0 chr3L 17375175 17375255 -7168302 - ROO_I LTR Pao -7527 729 650 3 717 213 315 14 20 chr3L 17377322 17377468 -7166089 + (TGGG)n Simple_repeat Simple_repeat 2 146 0 3 717 195 189 0 0 chr3L 17377556 17377609 -7165948 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 3 717 221 287 9 27 chr3L 17377646 17377757 -7165800 + (TGGG)n Simple_repeat Simple_repeat 2 110 0 3 717 195 189 0 0 chr3L 17377865 17377918 -7165639 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 3 717 253 299 11 53 chr3L 17378200 17378387 -7165170 + (TGGG)n Simple_repeat Simple_repeat 1 179 0 3 717 195 189 0 0 chr3L 17378498 17378551 -7165006 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 3 717 210 308 8 25 chr3L 17378588 17378708 -7164849 + (TGGG)n Simple_repeat Simple_repeat 1 118 0 3 717 208 264 5 68 chr3L 17378805 17378996 -7164561 + (TGG)n Simple_repeat Simple_repeat 2 180 0 3 717 205 299 11 0 chr3L 17379257 17379344 -7164213 + (TGGG)n Simple_repeat Simple_repeat 2 89 0 3 717 43 20 0 0 chr3L 17386608 17386658 -7156899 + AT_rich Low_complexity Low_complexity 1 50 0 3 717 35 24 0 0 chr3L 17386838 17386880 -7156677 + AT_rich Low_complexity Low_complexity 1 42 0 3 717 261 146 0 0 chr3L 17387771 17387819 -7155738 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 717 25 0 0 0 chr3L 17388362 17388387 -7155170 + AT_rich Low_complexity Low_complexity 1 25 0 3 717 24 53 0 0 chr3L 17396019 17396057 -7147500 + AT_rich Low_complexity Low_complexity 1 38 0 3 717 235 193 17 17 chr3L 17396493 17396551 -7147006 + (CATAT)n Simple_repeat Simple_repeat 1 58 0 3 717 21 0 0 0 chr3L 17398377 17398398 -7145159 + AT_rich Low_complexity Low_complexity 1 21 0 3 717 21 36 0 0 chr3L 17400250 17400278 -7143279 + AT_rich Low_complexity Low_complexity 1 28 0 3 717 206 211 0 0 chr3L 17400894 17400932 -7142625 + (TCCGG)n Simple_repeat Simple_repeat 5 42 0 3 717 22 80 0 0 chr3L 17403200 17403250 -7140307 + AT_rich Low_complexity Low_complexity 1 50 0 3 717 38 61 0 0 chr3L 17404952 17405018 -7138539 + AT_rich Low_complexity Low_complexity 1 66 0 3 717 22 0 0 0 chr3L 17410332 17410354 -7133203 + AT_rich Low_complexity Low_complexity 1 22 0 3 717 198 0 0 0 chr3L 17414682 17414704 -7128853 + (TC)n Simple_repeat Simple_repeat 2 23 0 3 717 21 0 0 0 chr3L 17420567 17420588 -7122969 + AT_rich Low_complexity Low_complexity 1 21 0 3 717 22 35 0 0 chr3L 17422004 17422033 -7121524 + AT_rich Low_complexity Low_complexity 1 29 0 3 717 233 119 24 0 chr3L 17423509 17423551 -7120006 + (CAT)n Simple_repeat Simple_repeat 1 43 0 3 717 21 0 0 0 chr3L 17431177 17431198 -7112359 + AT_rich Low_complexity Low_complexity 1 21 0 3 717 21 82 0 0 chr3L 17431271 17431320 -7112237 + AT_rich Low_complexity Low_complexity 1 49 0 3 718 22 35 0 0 chr3L 17432876 17432905 -7110652 + AT_rich Low_complexity Low_complexity 1 29 0 3 718 24 32 0 0 chr3L 17433606 17433637 -7109920 + AT_rich Low_complexity Low_complexity 1 31 0 3 718 196 91 45 0 chr3L 17434863 17434907 -7108650 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 718 227 172 46 15 chr3L 17435111 17435176 -7108381 + (CACCC)n Simple_repeat Simple_repeat 4 70 0 3 718 345 109 0 0 chr3L 17437116 17437171 -7106386 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 718 261 83 0 0 chr3L 17439467 17439503 -7104054 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 718 27 0 0 0 chr3L 17439698 17439725 -7103832 + AT_rich Low_complexity Low_complexity 1 27 0 3 718 26 82 0 0 chr3L 17440067 17440128 -7103429 + AT_rich Low_complexity Low_complexity 1 61 0 3 718 201 204 0 20 chr3L 17440579 17440629 -7102928 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 718 207 188 0 0 chr3L 17441907 17441955 -7101602 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 718 228 318 0 18 chr3L 17442599 17442711 -7100846 + (CAG)n Simple_repeat Simple_repeat 2 111 0 3 718 223 292 0 0 chr3L 17443735 17443800 -7099757 + (CAA)n Simple_repeat Simple_repeat 1 65 0 3 718 234 0 0 0 chr3L 17447337 17447363 -7096194 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 718 28 29 0 0 chr3L 17447796 17447831 -7095726 + AT_rich Low_complexity Low_complexity 1 35 0 3 718 21 36 0 0 chr3L 17447880 17447908 -7095649 + AT_rich Low_complexity Low_complexity 1 28 0 3 718 205 179 0 0 chr3L 17448724 17448763 -7094794 + T-rich Low_complexity Low_complexity 1 39 0 3 718 27 0 0 0 chr3L 17450222 17450249 -7093308 + AT_rich Low_complexity Low_complexity 1 27 0 3 718 234 136 0 0 chr3L 17450297 17450341 -7093216 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 718 27 73 0 0 chr3L 17450542 17450597 -7092960 + AT_rich Low_complexity Low_complexity 1 55 0 3 718 32 0 0 0 chr3L 17451023 17451055 -7092502 + AT_rich Low_complexity Low_complexity 1 32 0 3 718 22 0 0 0 chr3L 17452081 17452103 -7091454 + AT_rich Low_complexity Low_complexity 1 22 0 3 718 183 42 0 0 chr3L 17453572 17453596 -7089961 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 718 240 184 0 0 chr3L 17453601 17453650 -7089907 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 718 306 50 0 0 chr3L 17455780 17455820 -7087737 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 718 22 35 0 0 chr3L 17458435 17458464 -7085093 + AT_rich Low_complexity Low_complexity 1 29 0 3 718 28 29 0 0 chr3L 17458714 17458749 -7084808 + AT_rich Low_complexity Low_complexity 1 35 0 3 718 27 62 0 0 chr3L 17458911 17458959 -7084598 + AT_rich Low_complexity Low_complexity 1 48 0 3 718 22 35 0 0 chr3L 17459938 17459967 -7083590 + AT_rich Low_complexity Low_complexity 1 29 0 3 718 23 0 0 0 chr3L 17461737 17461760 -7081797 + AT_rich Low_complexity Low_complexity 1 23 0 3 718 231 298 0 0 chr3L 17463405 17463462 -7080095 + (CGG)n Simple_repeat Simple_repeat 1 57 0 3 718 26 50 0 0 chr3L 17469190 17469230 -7074327 + AT_rich Low_complexity Low_complexity 1 40 0 3 718 53 30 0 0 chr3L 17475232 17475299 -7068258 + AT_rich Low_complexity Low_complexity 1 67 0 3 718 34 0 0 0 chr3L 17475607 17475641 -7067916 + AT_rich Low_complexity Low_complexity 1 34 0 3 718 21 82 0 0 chr3L 17475724 17475773 -7067784 + AT_rich Low_complexity Low_complexity 1 49 0 3 718 26 30 0 0 chr3L 17475824 17475857 -7067700 + AT_rich Low_complexity Low_complexity 1 33 0 3 718 25 0 0 0 chr3L 17475889 17475914 -7067643 + AT_rich Low_complexity Low_complexity 1 25 0 3 718 208 178 22 0 chr3L 17480288 17480333 -7063224 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 718 192 40 0 0 chr3L 17480412 17480437 -7063120 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3 718 25 0 0 0 chr3L 17480955 17480980 -7062577 + AT_rich Low_complexity Low_complexity 1 25 0 3 718 205 155 68 17 chr3L 17483546 17483605 -7059952 + A-rich Low_complexity Low_complexity 3 64 0 3 718 189 0 0 0 chr3L 17485143 17485164 -7058393 + (CAACG)n Simple_repeat Simple_repeat 2 22 0 3 718 225 65 0 0 chr3L 17486768 17486799 -7056758 + (CGAG)n Simple_repeat Simple_repeat 4 34 0 3 718 226 159 23 0 chr3L 17486992 17487036 -7056521 + OSVALDO_LTR LTR Gypsy 47 91 -1105 3 718 236 268 0 0 chr3L 17489083 17489139 -7054418 + (TATG)n Simple_repeat Simple_repeat 1 56 0 3 718 186 133 0 0 chr3L 17489549 17489579 -7053978 + (CTG)n Simple_repeat Simple_repeat 3 32 0 3 718 36 0 0 0 chr3L 17490809 17490845 -7052712 + AT_rich Low_complexity Low_complexity 1 36 0 3 718 264 130 0 0 chr3L 17493857 17493903 -7049654 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 718 228 185 0 18 chr3L 17496223 17496278 -7047279 + T-rich Low_complexity Low_complexity 5 58 0 3 718 22 35 0 0 chr3L 17496625 17496654 -7046903 + AT_rich Low_complexity Low_complexity 1 29 0 3 718 251 167 0 0 chr3L 17497381 17497435 -7046122 - ROO_I LTR Pao -7542 714 661 3 718 27 0 0 0 chr3L 17506904 17506931 -7036626 + AT_rich Low_complexity Low_complexity 1 27 0 3 718 21 0 0 0 chr3L 17507177 17507198 -7036359 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 279 71 0 0 chr3L 17509556 17509598 -7033959 + (ATTTG)n Simple_repeat Simple_repeat 1 42 0 3 718 61915 2 1 9 chr3L 17510134 17517635 -7025922 - DM412 LTR Gypsy 0 6897 1 3 718 290 254 8 26 chr3L 17519941 17520058 -7023499 + (TTG)n Simple_repeat Simple_repeat 2 116 0 3 718 25 0 0 0 chr3L 17520548 17520573 -7022984 + AT_rich Low_complexity Low_complexity 1 25 0 3 718 244 248 30 0 chr3L 17522163 17522264 -7021293 - ROO_I LTR Pao -7511 745 642 3 718 29 28 0 0 chr3L 17523008 17523044 -7020513 + AT_rich Low_complexity Low_complexity 1 36 0 3 718 21 36 0 0 chr3L 17526425 17526453 -7017104 + AT_rich Low_complexity Low_complexity 1 28 0 3 718 21 0 0 0 chr3L 17534352 17534373 -7009184 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 21 0 0 0 chr3L 17534588 17534609 -7008948 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 207 139 0 0 chr3L 17535864 17535900 -7007657 + (CAG)n Simple_repeat Simple_repeat 1 36 0 3 718 31 26 0 0 chr3L 17537313 17537351 -7006206 + AT_rich Low_complexity Low_complexity 1 38 0 3 718 25 0 0 0 chr3L 17539105 17539130 -7004427 + AT_rich Low_complexity Low_complexity 1 25 0 3 718 27 29 0 0 chr3L 17539312 17539346 -7004211 + AT_rich Low_complexity Low_complexity 1 34 0 3 718 21 0 0 0 chr3L 17540543 17540564 -7002993 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 21 0 0 0 chr3L 17543912 17543933 -6999624 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 24 77 0 0 chr3L 17543960 17544012 -6999545 + AT_rich Low_complexity Low_complexity 1 52 0 3 718 189 100 19 39 chr3L 17544895 17544947 -6998610 + T-rich Low_complexity Low_complexity 5 55 0 3 718 21 0 0 0 chr3L 17544969 17544990 -6998567 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 21 36 0 0 chr3L 17545628 17545656 -6997901 + AT_rich Low_complexity Low_complexity 1 28 0 3 718 329 269 0 28 chr3L 17546480 17546587 -6996970 + CT-rich Low_complexity Low_complexity 2 105 0 3 718 22 70 0 0 chr3L 17551796 17551839 -6991718 + AT_rich Low_complexity Low_complexity 1 43 0 3 718 25 0 0 0 chr3L 17552069 17552094 -6991463 + AT_rich Low_complexity Low_complexity 1 25 0 3 718 38 22 0 0 chr3L 17553258 17553303 -6990254 + AT_rich Low_complexity Low_complexity 1 45 0 3 718 413 89 0 15 chr3L 17554399 17554467 -6989090 + (TAA)n Simple_repeat Simple_repeat 2 68 0 3 718 276 111 0 0 chr3L 17554593 17554638 -6988919 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 718 213 176 19 47 chr3L 17555329 17555436 -6988121 + (CTG)n Simple_repeat Simple_repeat 3 106 0 3 718 234 128 0 0 chr3L 17555536 17555575 -6987982 + (CTG)n Simple_repeat Simple_repeat 3 41 0 3 718 269 189 11 43 chr3L 17555595 17555689 -6987868 - ROO_I LTR Pao -7532 724 634 3 718 198 71 0 0 chr3L 17556883 17556911 -6986646 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 718 214 250 0 0 chr3L 17556983 17557023 -6986534 + (CTG)n Simple_repeat Simple_repeat 1 40 0 3 718 264 130 0 0 chr3L 17557797 17557843 -6985714 + (CCG)n Simple_repeat Simple_repeat 1 46 0 3 718 195 100 0 0 chr3L 17558619 17558649 -6984908 + (CTG)n Simple_repeat Simple_repeat 1 30 0 3 718 285 140 0 0 chr3L 17558725 17558782 -6984775 + (CTG)n Simple_repeat Simple_repeat 3 59 0 3 718 203 204 20 0 chr3L 17559428 17559477 -6984080 + (AAATG)n Simple_repeat Simple_repeat 1 50 0 3 718 210 118 0 0 chr3L 17559686 17559720 -6983837 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 718 218 220 17 0 chr3L 17559789 17559848 -6983709 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 718 24 0 0 0 chr3L 17560179 17560203 -6983354 + AT_rich Low_complexity Low_complexity 1 24 0 3 718 200 291 15 45 chr3L 17561478 17561611 -6981946 + A-rich Low_complexity Low_complexity 4 132 0 3 718 207 114 0 0 chr3L 17562044 17562079 -6981478 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 718 26 64 0 0 chr3L 17562794 17562841 -6980716 + AT_rich Low_complexity Low_complexity 1 47 0 3 718 23 0 0 0 chr3L 17562996 17563019 -6980538 + AT_rich Low_complexity Low_complexity 1 23 0 3 718 239 288 0 27 chr3L 17563147 17563222 -6980335 + CT-rich Low_complexity Low_complexity 4 76 0 3 719 216 0 0 0 chr3L 17565210 17565234 -6978323 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 719 208 182 0 22 chr3L 17565395 17565440 -6978117 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 719 23 0 0 0 chr3L 17566105 17566128 -6977429 + AT_rich Low_complexity Low_complexity 1 23 0 3 719 27 29 0 0 chr3L 17567619 17567653 -6975904 + AT_rich Low_complexity Low_complexity 1 34 0 3 719 201 121 0 0 chr3L 17569092 17569125 -6974432 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 3 719 229 277 0 0 chr3L 17571231 17571296 -6972261 + GA-rich Low_complexity Low_complexity 3 67 0 3 719 21 57 0 0 chr3L 17571571 17571606 -6971951 + AT_rich Low_complexity Low_complexity 1 35 0 3 719 214 276 0 26 chr3L 17572864 17572942 -6970615 + (ACTG)n Simple_repeat Simple_repeat 1 76 0 3 719 29 28 0 0 chr3L 17575771 17575807 -6967750 + AT_rich Low_complexity Low_complexity 1 36 0 3 719 209 222 0 0 chr3L 17576379 17576424 -6967133 + (GATTG)n Simple_repeat Simple_repeat 3 47 0 3 719 213 154 0 0 chr3L 17576554 17576593 -6966964 + CT-rich Low_complexity Low_complexity 3 41 0 3 719 260 260 10 29 chr3L 17577724 17577827 -6965730 + T-rich Low_complexity Low_complexity 5 105 0 3 719 213 140 0 23 chr3L 17578015 17578059 -6965498 + G-rich Low_complexity Low_complexity 5 47 0 3 719 26 0 0 0 chr3L 17578253 17578279 -6965278 + AT_rich Low_complexity Low_complexity 1 26 0 3 719 258 311 0 0 chr3L 17579618 17579708 -6963849 + (CAA)n Simple_repeat Simple_repeat 1 90 0 3 719 21 0 0 0 chr3L 17579982 17580003 -6963554 + AT_rich Low_complexity Low_complexity 1 21 0 3 719 255 31 0 0 chr3L 17581660 17581692 -6961865 + (TA)n Simple_repeat Simple_repeat 1 32 0 3 719 190 116 23 23 chr3L 17583648 17583692 -6959865 + (CAGAG)n Simple_repeat Simple_repeat 3 46 0 3 719 301 253 11 11 chr3L 17583731 17583819 -6959738 + (TG)n Simple_repeat Simple_repeat 1 88 0 3 719 204 97 0 0 chr3L 17584177 17584208 -6959349 + (CTG)n Simple_repeat Simple_repeat 2 32 0 3 719 207 161 0 0 chr3L 17585700 17585731 -6957826 + (CAG)n Simple_repeat Simple_repeat 1 31 0 3 719 189 107 0 0 chr3L 17586493 17586521 -6957036 + (TTCGG)n Simple_repeat Simple_repeat 2 29 0 3 719 364 216 8 23 chr3L 17586565 17586693 -6956864 + (TTG)n Simple_repeat Simple_repeat 2 127 0 3 719 28 61 0 0 chr3L 17588542 17588591 -6954966 + AT_rich Low_complexity Low_complexity 1 49 0 3 719 246 237 0 0 chr3L 17588837 17588896 -6954661 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 719 187 79 26 26 chr3L 17589320 17589359 -6954198 + (GTGTG)n Simple_repeat Simple_repeat 1 39 0 3 719 315 71 0 0 chr3L 17590774 17590816 -6952741 + (TTG)n Simple_repeat Simple_repeat 1 42 0 3 719 31 58 0 0 chr3L 17591573 17591625 -6951932 + AT_rich Low_complexity Low_complexity 1 52 0 3 719 30 0 0 0 chr3L 17592487 17592517 -6951040 + AT_rich Low_complexity Low_complexity 1 30 0 3 719 186 143 0 0 chr3L 17592912 17592947 -6950610 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 719 225 182 0 0 chr3L 17593429 17593484 -6950073 + (CAA)n Simple_repeat Simple_repeat 1 55 0 3 719 180 0 0 0 chr3L 17593633 17593653 -6949904 + (CAA)n Simple_repeat Simple_repeat 1 20 0 3 719 25 0 0 0 chr3L 17593849 17593874 -6949683 + AT_rich Low_complexity Low_complexity 1 25 0 3 719 219 114 0 0 chr3L 17594687 17594722 -6948835 + (TTG)n Simple_repeat Simple_repeat 1 35 0 3 719 183 129 0 0 chr3L 17595546 17595577 -6947980 + (TAA)n Simple_repeat Simple_repeat 1 31 0 3 719 22 56 0 0 chr3L 17596809 17596845 -6946712 + AT_rich Low_complexity Low_complexity 1 36 0 3 719 23 0 0 0 chr3L 17597244 17597267 -6946290 + AT_rich Low_complexity Low_complexity 1 23 0 3 719 249 33 0 0 chr3L 17599998 17600028 -6943529 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 719 26 30 0 0 chr3L 17600580 17600613 -6942944 + AT_rich Low_complexity Low_complexity 1 33 0 3 719 231 222 10 72 chr3L 17601104 17601201 -6942356 + A-rich Low_complexity Low_complexity 1 91 0 3 719 215 200 0 0 chr3L 17601394 17601434 -6942123 + (CGG)n Simple_repeat Simple_repeat 2 41 0 3 719 188 149 0 21 chr3L 17602012 17602060 -6941497 + (TGAG)n Simple_repeat Simple_repeat 2 48 0 3 719 25 31 0 0 chr3L 17602573 17602605 -6940952 + AT_rich Low_complexity Low_complexity 1 32 0 3 719 28 0 0 0 chr3L 17603691 17603719 -6939838 + AT_rich Low_complexity Low_complexity 1 28 0 3 719 267 276 0 0 chr3L 17603974 17604050 -6939507 + A-rich Low_complexity Low_complexity 2 77 0 3 719 260 246 16 0 chr3L 17604281 17604342 -6939215 + (CGG)n Simple_repeat Simple_repeat 1 62 0 3 719 22 80 0 0 chr3L 17604591 17604641 -6938916 + AT_rich Low_complexity Low_complexity 1 50 0 3 719 349 248 24 16 chr3L 17604830 17604953 -6938604 + (CAG)n Simple_repeat Simple_repeat 2 125 0 3 719 183 42 0 0 chr3L 17606422 17606446 -6937111 + (T)n Simple_repeat Simple_repeat 1 24 0 3 719 33 97 0 0 chr3L 17606671 17606774 -6936783 + AT_rich Low_complexity Low_complexity 1 103 0 3 719 248 50 0 70 chr3L 17607027 17607070 -6936487 + (TTG)n Simple_repeat Simple_repeat 1 40 0 3 719 249 98 0 0 chr3L 17607335 17607376 -6936181 + (CAACT)n Simple_repeat Simple_repeat 5 45 0 3 719 23 0 0 0 chr3L 17607940 17607963 -6935594 + AT_rich Low_complexity Low_complexity 1 23 0 3 719 24 0 0 0 chr3L 17608017 17608041 -6935516 + AT_rich Low_complexity Low_complexity 1 24 0 3 719 21 71 0 0 chr3L 17608104 17608146 -6935411 + AT_rich Low_complexity Low_complexity 1 42 0 3 719 241 282 0 12 chr3L 17610051 17610137 -6933420 + (TG)n Simple_repeat Simple_repeat 2 86 0 3 719 22 0 0 0 chr3L 17611288 17611310 -6932247 + AT_rich Low_complexity Low_complexity 1 22 0 3 719 26 0 0 0 chr3L 17613098 17613124 -6930433 + AT_rich Low_complexity Low_complexity 1 26 0 3 719 26 30 0 0 chr3L 17624330 17624363 -6919194 + AT_rich Low_complexity Low_complexity 1 33 0 3 719 29 0 0 0 chr3L 17627790 17627819 -6915738 + AT_rich Low_complexity Low_complexity 1 29 0 3 719 24 0 0 0 chr3L 17628644 17628668 -6914889 + AT_rich Low_complexity Low_complexity 1 24 0 3 719 24 67 0 0 chr3L 17628980 17629025 -6914532 + AT_rich Low_complexity Low_complexity 1 45 0 3 719 21 0 0 0 chr3L 17630488 17630509 -6913048 + AT_rich Low_complexity Low_complexity 1 21 0 3 719 21 57 0 0 chr3L 17633644 17633679 -6909878 + AT_rich Low_complexity Low_complexity 1 35 0 3 719 22 0 0 0 chr3L 17633732 17633754 -6909803 + AT_rich Low_complexity Low_complexity 1 22 0 3 719 300 53 0 0 chr3L 17634988 17635026 -6908531 + (CAAT)n Simple_repeat Simple_repeat 1 38 0 3 719 216 156 22 22 chr3L 17635100 17635146 -6908411 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 719 335 192 0 13 chr3L 17635262 17635341 -6908216 + (CAA)n Simple_repeat Simple_repeat 1 78 0 3 719 23 0 0 0 chr3L 17636988 17637011 -6906546 + AT_rich Low_complexity Low_complexity 1 23 0 3 719 30 59 0 0 chr3L 17640043 17640094 -6903463 + AT_rich Low_complexity Low_complexity 1 51 0 3 719 21 0 0 0 chr3L 17642696 17642717 -6900840 + AT_rich Low_complexity Low_complexity 1 21 0 3 719 23 33 0 0 chr3L 17646063 17646093 -6897464 + AT_rich Low_complexity Low_complexity 1 30 0 3 719 246 32 0 0 chr3L 17652295 17652326 -6891231 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 719 22 35 0 0 chr3L 17653038 17653067 -6890490 + AT_rich Low_complexity Low_complexity 1 29 0 3 719 22 35 0 0 chr3L 17653093 17653122 -6890435 + AT_rich Low_complexity Low_complexity 1 29 0 3 719 180 0 0 0 chr3L 17653850 17653870 -6889687 + (T)n Simple_repeat Simple_repeat 1 20 0 3 719 215 208 0 0 chr3L 17655544 17655592 -6887965 + (CTG)n Simple_repeat Simple_repeat 1 48 0 3 719 264 178 0 0 chr3L 17655721 17655794 -6887763 - ROO_I LTR Pao -7523 733 661 3 719 245 150 0 48 chr3L 17656297 17656360 -6887197 + (CTG)n Simple_repeat Simple_repeat 1 60 0 3 719 186 103 0 0 chr3L 17656569 17656598 -6886959 + (CTG)n Simple_repeat Simple_repeat 3 31 0 3 719 219 203 0 0 chr3L 17656742 17656801 -6886756 + (CTG)n Simple_repeat Simple_repeat 1 59 0 3 719 260 213 0 31 chr3L 17656923 17657020 -6886537 - ROO_I LTR Pao -7522 734 641 3 719 255 293 0 0 chr3L 17658467 17658542 -6885015 + (TTCGGG)n Simple_repeat Simple_repeat 4 78 0 3 719 23 0 0 0 chr3L 17660458 17660481 -6883076 + AT_rich Low_complexity Low_complexity 1 23 0 3 719 38 61 0 0 chr3L 17662893 17662959 -6880598 + AT_rich Low_complexity Low_complexity 1 66 0 3 719 206 182 23 0 chr3L 17663278 17663322 -6880235 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 719 183 139 0 0 chr3L 17664778 17664814 -6878743 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 719 33 0 0 0 chr3L 17668491 17668524 -6875033 + AT_rich Low_complexity Low_complexity 1 33 0 3 719 186 43 0 0 chr3L 17669350 17669373 -6874184 + (CGAAA)n Simple_repeat Simple_repeat 3 25 0 3 719 29 60 0 0 chr3L 17670420 17670470 -6873087 + AT_rich Low_complexity Low_complexity 1 50 0 3 719 22 0 0 0 chr3L 17673188 17673210 -6870347 + AT_rich Low_complexity Low_complexity 1 22 0 3 719 47 0 0 0 chr3L 17673283 17673330 -6870227 + AT_rich Low_complexity Low_complexity 1 47 0 3 719 226 118 19 38 chr3L 17673624 17673677 -6869880 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 719 21 71 0 0 chr3L 17675865 17675907 -6867650 + AT_rich Low_complexity Low_complexity 1 42 0 3 719 22 94 0 0 chr3L 17676809 17676873 -6866684 + AT_rich Low_complexity Low_complexity 1 64 0 3 719 28 29 0 0 chr3L 17678301 17678336 -6865221 + AT_rich Low_complexity Low_complexity 1 35 0 3 719 201 39 0 0 chr3L 17679906 17679932 -6863625 + (GCTG)n Simple_repeat Simple_repeat 3 28 0 3 719 45 62 0 0 chr3L 17680965 17681045 -6862512 + AT_rich Low_complexity Low_complexity 1 80 0 3 719 255 222 0 0 chr3L 17682849 17682930 -6860627 + (CAA)n Simple_repeat Simple_repeat 3 83 0 3 719 22 0 0 0 chr3L 17684426 17684448 -6859109 + AT_rich Low_complexity Low_complexity 1 22 0 3 719 197 108 27 0 chr3L 17684454 17684491 -6859066 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 719 245 159 16 0 chr3L 17684631 17684694 -6858863 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 719 24 53 0 0 chr3L 17686646 17686684 -6856873 + AT_rich Low_complexity Low_complexity 1 38 0 3 719 34 24 0 0 chr3L 17691355 17691396 -6852161 + AT_rich Low_complexity Low_complexity 1 41 0 3 719 234 0 0 0 chr3L 17691419 17691445 -6852112 + (TTTAA)n Simple_repeat Simple_repeat 2 27 0 3 719 4015 0 0 0 chr3L 17691445 17691938 -6851619 - DOC6_DM LINE Jockey -4 4218 3726 3 719 201 39 0 0 chr3L 17692516 17692542 -6851015 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 719 509 87 317 0 chr3L 17693515 17693619 -6849938 + DNAREP1_DM LINE Penelope 458 594 0 3 719 318 67 0 0 chr3L 17694318 17694363 -6849194 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 719 24 53 0 0 chr3L 17694619 17694657 -6848900 + AT_rich Low_complexity Low_complexity 1 38 0 3 720 255 39 115 0 chr3L 17695226 17695304 -6848253 + (TA)n Simple_repeat Simple_repeat 2 88 0 3 720 36 53 0 0 chr3L 17695304 17695361 -6848196 + AT_rich Low_complexity Low_complexity 1 57 0 3 720 21 0 0 0 chr3L 17696070 17696091 -6847466 + AT_rich Low_complexity Low_complexity 1 21 0 3 720 21 0 0 0 chr3L 17696126 17696147 -6847410 + AT_rich Low_complexity Low_complexity 1 21 0 3 720 218 81 27 0 chr3L 17707202 17707239 -6836318 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 3 720 211 170 0 36 chr3L 17714621 17714676 -6828881 + (AAATG)n Simple_repeat Simple_repeat 1 53 0 3 720 23 0 0 0 chr3L 17715332 17715355 -6828202 + AT_rich Low_complexity Low_complexity 1 23 0 3 720 27 0 0 0 chr3L 17723169 17723196 -6820361 + AT_rich Low_complexity Low_complexity 1 27 0 3 720 2918 20 0 3 chr3L 17724005 17724362 -6819195 - MDG1_LTR LTR Gypsy 0 442 87 3 720 423 100 0 0 chr3L 17724362 17724432 -6819125 + (TTA)n Simple_repeat Simple_repeat 3 72 0 3 720 1120 10 9 12 chr3L 17724436 17724611 -6818946 - MDG1_I LTR Gypsy 0 6596 6435 3 720 45855 8 3 2 chr3L 17724610 17730154 -6813403 + MDG1_I LTR Gypsy 760 6310 -286 3 720 6001 3 0 8 chr3L 17730154 17730870 -6812687 - MDG1_I LTR Gypsy -5849 747 38 3 720 2507 14 0 0 chr3L 17730895 17731192 -6812365 - MDG1_LTR LTR Gypsy -59 383 87 3 720 423 100 0 0 chr3L 17731192 17731262 -6812295 + (TTA)n Simple_repeat Simple_repeat 3 72 0 3 720 279 93 0 0 chr3L 17731831 17731874 -6811683 + (ATG)n Simple_repeat Simple_repeat 1 43 0 3 720 23 0 0 0 chr3L 17733151 17733174 -6810383 + AT_rich Low_complexity Low_complexity 1 23 0 3 720 28 86 0 0 chr3L 17737001 17737071 -6806486 + AT_rich Low_complexity Low_complexity 1 70 0 3 720 22 35 0 0 chr3L 17740484 17740513 -6803044 + AT_rich Low_complexity Low_complexity 1 29 0 3 720 212 231 0 0 chr3L 17740795 17740834 -6802723 + (CAG)n Simple_repeat Simple_repeat 3 41 0 3 720 22 0 0 0 chr3L 17741526 17741548 -6802009 + AT_rich Low_complexity Low_complexity 1 22 0 3 720 23 0 0 0 chr3L 17749980 17750003 -6793554 + AT_rich Low_complexity Low_complexity 1 23 0 3 720 30 27 0 0 chr3L 17753375 17753412 -6790145 + AT_rich Low_complexity Low_complexity 1 37 0 3 720 25 51 0 0 chr3L 17754246 17754285 -6789272 + AT_rich Low_complexity Low_complexity 1 39 0 3 720 45 0 0 0 chr3L 17755081 17755126 -6788431 + AT_rich Low_complexity Low_complexity 1 45 0 3 720 22 0 0 0 chr3L 17757605 17757627 -6785930 + AT_rich Low_complexity Low_complexity 1 22 0 3 720 21 36 0 0 chr3L 17757778 17757806 -6785751 + AT_rich Low_complexity Low_complexity 1 28 0 3 720 234 268 0 0 chr3L 17760628 17760684 -6782873 + (CAA)n Simple_repeat Simple_repeat 2 57 0 3 720 202 200 0 0 chr3L 17762060 17762100 -6781457 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 720 33 43 0 0 chr3L 17765800 17765847 -6777710 + AT_rich Low_complexity Low_complexity 1 47 0 3 720 31 26 0 0 chr3L 17767421 17767459 -6776098 + AT_rich Low_complexity Low_complexity 1 38 0 3 720 26 0 0 0 chr3L 17769809 17769835 -6773722 + AT_rich Low_complexity Low_complexity 1 26 0 3 720 216 273 0 15 chr3L 17771831 17771898 -6771659 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 720 182 62 31 0 chr3L 17774452 17774484 -6769073 + (CAATA)n Simple_repeat Simple_repeat 3 35 0 3 720 26 50 0 0 chr3L 17775314 17775354 -6768203 + AT_rich Low_complexity Low_complexity 1 40 0 3 720 249 109 0 0 chr3L 17775634 17775680 -6767877 + (A)n Simple_repeat Simple_repeat 1 46 0 3 720 225 0 0 0 chr3L 17776467 17776492 -6767065 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 720 37 23 0 0 chr3L 17776609 17776653 -6766904 + AT_rich Low_complexity Low_complexity 1 44 0 3 720 36 53 0 0 chr3L 17776703 17776760 -6766797 + AT_rich Low_complexity Low_complexity 1 57 0 3 720 220 220 0 0 chr3L 17777832 17777882 -6765675 + A-rich Low_complexity Low_complexity 1 50 0 3 720 23 54 0 0 chr3L 17779434 17779471 -6764086 + AT_rich Low_complexity Low_complexity 1 37 0 3 720 23 33 0 0 chr3L 17780059 17780089 -6763468 + AT_rich Low_complexity Low_complexity 1 30 0 3 720 21 36 0 0 chr3L 17780900 17780928 -6762629 + AT_rich Low_complexity Low_complexity 1 28 0 3 720 27 81 0 0 chr3L 17781338 17781400 -6762157 + AT_rich Low_complexity Low_complexity 1 62 0 3 720 21 57 0 0 chr3L 17782940 17782975 -6760582 + AT_rich Low_complexity Low_complexity 1 35 0 3 720 21 36 0 0 chr3L 17785145 17785173 -6758384 + AT_rich Low_complexity Low_complexity 1 28 0 3 720 37 0 0 0 chr3L 17786642 17786679 -6756878 + AT_rich Low_complexity Low_complexity 1 37 0 3 720 260 136 30 74 chr3L 17791315 17791450 -6752107 + (CTG)n Simple_repeat Simple_repeat 3 131 0 3 720 234 284 12 12 chr3L 17791610 17791692 -6751865 + (CTG)n Simple_repeat Simple_repeat 1 82 0 3 720 12683 82 5 2 chr3L 17792963 17794695 -6748862 - S_DM DNA Tc1 0 1736 1 3 720 26 30 0 0 chr3L 17795676 17795709 -6747848 + AT_rich Low_complexity Low_complexity 1 33 0 3 720 28 71 0 0 chr3L 17797968 17798024 -6745533 + AT_rich Low_complexity Low_complexity 1 56 0 3 720 204 67 0 0 chr3L 17799528 17799558 -6743999 + (T)n Simple_repeat Simple_repeat 1 30 0 3 720 22 0 0 0 chr3L 17802341 17802363 -6741194 + AT_rich Low_complexity Low_complexity 1 22 0 3 720 23 54 0 0 chr3L 17805348 17805385 -6738172 + AT_rich Low_complexity Low_complexity 1 37 0 3 720 21 36 0 0 chr3L 17805682 17805710 -6737847 + AT_rich Low_complexity Low_complexity 1 28 0 3 720 243 146 0 0 chr3L 17806222 17806263 -6737294 + (ATTCG)n Simple_repeat Simple_repeat 5 45 0 3 720 24 0 0 0 chr3L 17814908 17814932 -6728625 + AT_rich Low_complexity Low_complexity 1 24 0 3 720 23 0 0 0 chr3L 17817360 17817383 -6726174 + AT_rich Low_complexity Low_complexity 1 23 0 3 720 21 36 0 0 chr3L 17819808 17819836 -6723721 + AT_rich Low_complexity Low_complexity 1 28 0 3 720 22 35 0 0 chr3L 17824137 17824166 -6719391 + AT_rich Low_complexity Low_complexity 1 29 0 3 720 186 71 0 0 chr3L 17824329 17824357 -6719200 + (TTAA)n Simple_repeat Simple_repeat 2 29 0 3 721 234 299 0 0 chr3L 17825958 17826025 -6717532 - TART_B1 LINE telomeric -4409 6245 6179 3 721 255 318 0 0 chr3L 17826506 17826616 -6716941 + (TGG)n Simple_repeat Simple_repeat 3 112 0 3 721 305 284 0 0 chr3L 17826960 17827055 -6716502 + DNAREP1_DM LINE Penelope 304 398 -196 3 721 695 127 8 25 chr3L 17827687 17827808 -6715749 + BS2 LINE Jockey 4603 4721 0 3 721 23 0 0 0 chr3L 17827808 17827831 -6715726 + AT_rich Low_complexity Low_complexity 1 23 0 3 721 280 309 0 0 chr3L 17828053 17828163 -6715394 + (TGG)n Simple_repeat Simple_repeat 3 112 0 3 721 859 80 0 0 chr3L 17828935 17829047 -6714510 + DNAREP1_DM LINE Penelope 2 113 -481 3 721 1199 81 95 95 chr3L 17829045 17829277 -6714280 + DNAREP1_DM LINE Penelope 362 593 -1 3 721 242 191 0 0 chr3L 17837378 17837425 -6706132 + (CCG)n Simple_repeat Simple_repeat 2 48 0 3 721 205 86 0 28 chr3L 17837916 17837952 -6705605 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 3 721 225 208 0 0 chr3L 17838379 17838427 -6705130 + DNAREP1_DM LINE Penelope 431 478 -116 3 721 30 69 0 0 chr3L 17842697 17842755 -6700802 + AT_rich Low_complexity Low_complexity 1 58 0 3 721 31 26 0 0 chr3L 17848305 17848343 -6695214 + AT_rich Low_complexity Low_complexity 1 38 0 3 721 24 0 0 0 chr3L 17850684 17850708 -6692849 + AT_rich Low_complexity Low_complexity 1 24 0 3 721 28 0 0 0 chr3L 17850993 17851021 -6692536 + AT_rich Low_complexity Low_complexity 1 28 0 3 721 231 188 0 0 chr3L 17851220 17851268 -6692289 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 3 721 1926 183 89 46 chr3L 17851994 17852498 -6691059 - DNAREP1_DM LINE Penelope -68 526 1 3 721 29 60 0 0 chr3L 17852907 17852957 -6690600 + AT_rich Low_complexity Low_complexity 1 50 0 3 721 552 130 0 0 chr3L 17853385 17853477 -6690080 + (TGG)n Simple_repeat Simple_repeat 2 93 0 3 721 23 0 0 0 chr3L 17853580 17853603 -6689954 + AT_rich Low_complexity Low_complexity 1 23 0 3 721 2998 9 0 0 chr3L 17854013 17854359 -6689198 + Invader4_LTR LTR Gypsy 1 346 0 3 721 283 180 0 62 chr3L 17854368 17854433 -6689124 + DNAREP1_DM LINE Penelope 405 465 -129 3 721 649 13 0 0 chr3L 17854843 17854919 -6688638 + PROTOP_B DNA P 1 76 -1077 3 721 4592 107 25 4 chr3L 17854928 17855697 -6687860 - M4DM DNA Transib -36 1399 615 3 721 238 298 84 47 chr3L 17856108 17856323 -6687234 + TRANSIB1 DNA Transib 2182 2404 -610 3 721 1603 101 77 48 chr3L 17856272 17856585 -6686972 - M4DM DNA Transib -1024 411 90 3 721 30 69 0 0 chr3L 17856884 17856942 -6686615 + AT_rich Low_complexity Low_complexity 1 58 0 3 721 40847 0 0 0 chr3L 17856942 17861657 -6681900 + DOC LINE Jockey 12 4725 0 3 721 1820 184 140 7 chr3L 17862240 17862704 -6680853 - DNAREP1_DM LINE Penelope -68 526 1 3 721 36 53 0 0 chr3L 17863112 17863169 -6680388 + AT_rich Low_complexity Low_complexity 1 57 0 3 721 23 0 0 0 chr3L 17863696 17863719 -6679838 + AT_rich Low_complexity Low_complexity 1 23 0 3 721 249 102 61 0 chr3L 17863966 17864015 -6679542 + DMSAT6 Satellite Satellite 267 318 -152 3 721 647 13 0 0 chr3L 17864350 17864426 -6679131 + PROTOP_B DNA P 1 76 -1077 3 721 4643 104 25 4 chr3L 17864435 17865204 -6678353 - M4DM DNA Transib -36 1399 615 3 721 259 291 45 29 chr3L 17865616 17865854 -6677703 + TRANSIB2 DNA Transib 2182 2427 -417 3 721 2275 90 52 39 chr3L 17865780 17866186 -6677371 - M4DM DNA Transib -1024 411 1 3 721 1725 51 51 0 chr3L 17866186 17866419 -6677138 + PROTOP_B DNA P 79 322 -831 3 721 38 22 0 0 chr3L 17866419 17866464 -6677093 + AT_rich Low_complexity Low_complexity 1 45 0 3 721 4022 60 78 32 chr3L 17866464 17867118 -6676439 + PROTOP_B DNA P 470 1153 0 3 721 1949 179 89 46 chr3L 17868215 17868718 -6674839 - DNAREP1_DM LINE Penelope -68 526 2 3 721 29 60 0 0 chr3L 17869128 17869178 -6674379 + AT_rich Low_complexity Low_complexity 1 50 0 3 721 228 35 0 0 chr3L 17869623 17869652 -6673905 + (A)n Simple_repeat Simple_repeat 1 29 0 3 721 362 65 31 42 chr3L 17869728 17869824 -6673733 + (TATAA)n Simple_repeat Simple_repeat 3 97 0 3 721 21 36 0 0 chr3L 17870496 17870524 -6673033 + AT_rich Low_complexity Low_complexity 1 28 0 3 721 256 152 202 0 chr3L 17870862 17870941 -6672616 + Transib-N1_DM DNA Transib 21 115 -399 3 721 26 0 0 0 chr3L 17871733 17871759 -6671798 + AT_rich Low_complexity Low_complexity 1 26 0 3 721 236 212 45 0 chr3L 17871871 17871937 -6671620 - DNAREP1_DM LINE Penelope -496 98 30 3 721 22 0 0 0 chr3L 17875811 17875833 -6667724 + AT_rich Low_complexity Low_complexity 1 22 0 3 721 28 29 0 0 chr3L 17876437 17876472 -6667085 + AT_rich Low_complexity Low_complexity 1 35 0 3 721 28 61 0 0 chr3L 17876733 17876782 -6666775 + AT_rich Low_complexity Low_complexity 1 49 0 3 721 22 80 0 0 chr3L 17877685 17877735 -6665822 + AT_rich Low_complexity Low_complexity 1 50 0 3 721 25 83 0 0 chr3L 17877874 17877934 -6665623 + AT_rich Low_complexity Low_complexity 1 60 0 3 721 23 0 0 0 chr3L 17878039 17878062 -6665495 + AT_rich Low_complexity Low_complexity 1 23 0 3 721 682 221 63 81 chr3L 17878664 17878886 -6664671 + DNAREP1_DM LINE Penelope 367 584 -10 3 721 41 87 0 0 chr3L 17879049 17879153 -6664404 + AT_rich Low_complexity Low_complexity 1 104 0 3 721 23 0 0 0 chr3L 17881212 17881235 -6662322 + AT_rich Low_complexity Low_complexity 1 23 0 3 721 23 68 0 0 chr3L 17884471 17884515 -6659042 + AT_rich Low_complexity Low_complexity 1 44 0 3 721 31 0 0 0 chr3L 17884872 17884903 -6658654 + AT_rich Low_complexity Low_complexity 1 31 0 3 721 28 0 0 0 chr3L 17885402 17885430 -6658127 + AT_rich Low_complexity Low_complexity 1 28 0 3 721 22 56 0 0 chr3L 17886077 17886113 -6657444 + AT_rich Low_complexity Low_complexity 1 36 0 3 721 21 71 0 0 chr3L 17891676 17891718 -6651839 + AT_rich Low_complexity Low_complexity 1 42 0 3 721 24 53 0 0 chr3L 17896780 17896818 -6646739 + AT_rich Low_complexity Low_complexity 1 38 0 3 721 22 35 0 0 chr3L 17898220 17898249 -6645308 + AT_rich Low_complexity Low_complexity 1 29 0 3 721 201 147 0 0 chr3L 17900780 17900814 -6642743 + (TTG)n Simple_repeat Simple_repeat 1 34 0 3 721 22 35 0 0 chr3L 17906781 17906810 -6636747 + AT_rich Low_complexity Low_complexity 1 29 0 3 721 22 56 0 0 chr3L 17907047 17907083 -6636474 + AT_rich Low_complexity Low_complexity 1 36 0 3 721 27 92 0 0 chr3L 17907882 17907958 -6635599 + AT_rich Low_complexity Low_complexity 1 76 0 3 721 23 33 0 0 chr3L 17908661 17908691 -6634866 + AT_rich Low_complexity Low_complexity 1 30 0 3 721 236 194 63 16 chr3L 17909047 17909110 -6634447 - DNAREP1_DM LINE Penelope -513 81 16 3 721 192 158 0 0 chr3L 17910798 17910836 -6632721 + (AAATG)n Simple_repeat Simple_repeat 3 40 0 3 721 23 54 0 0 chr3L 17910970 17911007 -6632550 + AT_rich Low_complexity Low_complexity 1 37 0 3 721 4416 6 2 0 chr3L 17911526 17912043 -6631514 - NOMAD_LTR LTR Gypsy 0 518 1 3 721 7357 8 0 2 chr3L 17912043 17912904 -6630653 - NOMAD_I LTR Gypsy 0 6572 5714 3 721 6960 2 107 0 chr3L 17912888 17913755 -6629802 - NOMAD_I LTR Gypsy -5612 960 1 3 721 4416 6 2 0 chr3L 17913755 17914272 -6629285 - NOMAD_LTR LTR Gypsy 0 518 1 3 721 27 0 0 0 chr3L 17915188 17915215 -6628342 + AT_rich Low_complexity Low_complexity 1 27 0 3 721 220 264 35 0 chr3L 17915875 17915962 -6627595 + A-rich Low_complexity Low_complexity 3 92 0 3 721 270 195 0 0 chr3L 17916049 17916126 -6627431 + (TG)n Simple_repeat Simple_repeat 1 77 0 3 721 26 0 0 0 chr3L 17916713 17916739 -6626818 + AT_rich Low_complexity Low_complexity 1 26 0 3 721 228 143 0 0 chr3L 17917695 17917737 -6625820 + (TTG)n Simple_repeat Simple_repeat 2 43 0 3 721 23 0 0 0 chr3L 17918457 17918480 -6625077 + AT_rich Low_complexity Low_complexity 1 23 0 3 721 28 71 0 0 chr3L 17921790 17921846 -6621711 + AT_rich Low_complexity Low_complexity 1 56 0 3 721 27 0 0 0 chr3L 17922444 17922471 -6621086 + AT_rich Low_complexity Low_complexity 1 27 0 3 721 22 35 0 0 chr3L 17926887 17926916 -6616641 + AT_rich Low_complexity Low_complexity 1 29 0 3 721 30 77 0 0 chr3L 17929746 17929811 -6613746 + AT_rich Low_complexity Low_complexity 1 65 0 3 721 34 0 0 0 chr3L 17930885 17930919 -6612638 + AT_rich Low_complexity Low_complexity 1 34 0 3 721 21 0 0 0 chr3L 17932725 17932746 -6610811 + AT_rich Low_complexity Low_complexity 1 21 0 3 721 31 0 0 0 chr3L 17933650 17933681 -6609876 + AT_rich Low_complexity Low_complexity 1 31 0 3 721 24 32 0 0 chr3L 17938263 17938294 -6605263 + AT_rich Low_complexity Low_complexity 1 31 0 3 721 22 56 0 0 chr3L 17939182 17939218 -6604339 + AT_rich Low_complexity Low_complexity 1 36 0 3 721 23 33 0 0 chr3L 17941878 17941908 -6601649 + AT_rich Low_complexity Low_complexity 1 30 0 3 721 22 35 0 0 chr3L 17942932 17942961 -6600596 + AT_rich Low_complexity Low_complexity 1 29 0 3 721 22 35 0 0 chr3L 17944390 17944419 -6599138 + AT_rich Low_complexity Low_complexity 1 29 0 3 721 188 0 0 69 chr3L 17944784 17944813 -6598744 + (CATA)n Simple_repeat Simple_repeat 3 29 0 3 721 209 169 77 0 chr3L 17945324 17945389 -6598168 + (TTTG)n Simple_repeat Simple_repeat 2 71 0 3 721 21 36 0 0 chr3L 17945403 17945431 -6598126 + AT_rich Low_complexity Low_complexity 1 28 0 3 721 27 0 0 0 chr3L 17946114 17946141 -6597416 + AT_rich Low_complexity Low_complexity 1 27 0 3 721 21 0 0 0 chr3L 17946417 17946438 -6597119 + AT_rich Low_complexity Low_complexity 1 21 0 3 721 198 0 0 0 chr3L 17946485 17946507 -6597050 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 721 201 74 0 0 chr3L 17948318 17948345 -6595212 + (CTG)n Simple_repeat Simple_repeat 1 27 0 3 721 32 0 0 0 chr3L 17951362 17951394 -6592163 + AT_rich Low_complexity Low_complexity 1 32 0 3 721 30 0 0 0 chr3L 17954650 17954680 -6588877 + AT_rich Low_complexity Low_complexity 1 30 0 3 721 25 65 0 0 chr3L 17955122 17955168 -6588389 + AT_rich Low_complexity Low_complexity 1 46 0 3 721 31 0 0 0 chr3L 17955202 17955233 -6588324 + AT_rich Low_complexity Low_complexity 1 31 0 3 722 24 0 0 0 chr3L 17957041 17957065 -6586492 + AT_rich Low_complexity Low_complexity 1 24 0 3 722 210 37 0 0 chr3L 17958063 17958090 -6585467 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 722 555 139 0 0 chr3L 17958228 17958329 -6585228 + (CAG)n Simple_repeat Simple_repeat 1 101 0 3 722 201 39 0 0 chr3L 17958676 17958702 -6584855 + (TTTCG)n Simple_repeat Simple_repeat 2 27 0 3 722 214 167 0 0 chr3L 17959695 17959731 -6583826 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 3 722 25 31 0 0 chr3L 17960819 17960851 -6582706 + AT_rich Low_complexity Low_complexity 1 32 0 3 722 200 167 76 0 chr3L 17960916 17960982 -6582575 + T-rich Low_complexity Low_complexity 2 72 0 3 722 220 0 56 28 chr3L 17961095 17961131 -6582426 + (CATTT)n Simple_repeat Simple_repeat 3 39 0 3 722 297 89 0 0 chr3L 17963038 17963083 -6580474 + (CTG)n Simple_repeat Simple_repeat 3 47 0 3 722 215 226 0 16 chr3L 17963451 17963514 -6580043 + (CTG)n Simple_repeat Simple_repeat 1 62 0 3 722 187 203 0 28 chr3L 17963537 17963608 -6579949 + (TTG)n Simple_repeat Simple_repeat 3 71 0 3 722 287 226 0 31 chr3L 17963740 17963836 -6579721 + (CTG)n Simple_repeat Simple_repeat 3 95 0 3 722 263 165 0 81 chr3L 17963890 17963976 -6579581 - ROO_I LTR Pao -7519 737 659 3 722 180 0 0 0 chr3L 17964585 17964605 -6578952 + (CTG)n Simple_repeat Simple_repeat 3 22 0 3 722 22 99 0 0 chr3L 17968302 17968373 -6575184 + AT_rich Low_complexity Low_complexity 1 71 0 3 722 198 0 0 0 chr3L 17969051 17969073 -6574484 + (GAA)n Simple_repeat Simple_repeat 1 22 0 3 722 219 114 0 0 chr3L 17969569 17969604 -6573953 + (GAATG)n Simple_repeat Simple_repeat 3 37 0 3 722 22 56 0 0 chr3L 17970481 17970517 -6573040 + AT_rich Low_complexity Low_complexity 1 36 0 3 722 285 29 0 0 chr3L 17971059 17971093 -6572464 + (CAG)n Simple_repeat Simple_repeat 3 36 0 3 722 21 36 0 0 chr3L 17972670 17972698 -6570859 + AT_rich Low_complexity Low_complexity 1 28 0 3 722 288 53 0 0 chr3L 17972759 17972797 -6570760 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 722 21 0 0 0 chr3L 17973323 17973344 -6570213 + AT_rich Low_complexity Low_complexity 1 21 0 3 722 228 197 0 27 chr3L 17974631 17974724 -6568833 + (CTGTG)n Simple_repeat Simple_repeat 1 90 0 3 722 180 182 0 0 chr3L 17975047 17975091 -6568466 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 722 200 205 0 0 chr3L 17975992 17976031 -6567526 + (TTCGG)n Simple_repeat Simple_repeat 1 39 0 3 722 212 175 0 0 chr3L 17978411 17978451 -6565106 + A-rich Low_complexity Low_complexity 1 40 0 3 722 249 83 0 0 chr3L 17980367 17980403 -6563154 + (CAG)n Simple_repeat Simple_repeat 2 37 0 3 722 228 196 0 19 chr3L 17980614 17980666 -6562891 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 722 189 154 0 0 chr3L 17980778 17980817 -6562740 + (CTG)n Simple_repeat Simple_repeat 3 41 0 3 722 22 35 0 0 chr3L 17987755 17987784 -6555773 + AT_rich Low_complexity Low_complexity 1 29 0 3 722 41 21 0 0 chr3L 17988191 17988239 -6555318 + AT_rich Low_complexity Low_complexity 1 48 0 3 722 206 245 0 0 chr3L 17989656 17989709 -6553848 + A-rich Low_complexity Low_complexity 1 53 0 3 722 266 299 0 0 chr3L 17991701 17991818 -6551739 + (CTG)n Simple_repeat Simple_repeat 3 119 0 3 722 32 0 0 0 chr3L 17992280 17992312 -6551245 + AT_rich Low_complexity Low_complexity 1 32 0 3 722 206 62 31 0 chr3L 17992532 17992564 -6550993 + (CGAAA)n Simple_repeat Simple_repeat 4 36 0 3 722 21 36 0 0 chr3L 17995021 17995049 -6548508 + AT_rich Low_complexity Low_complexity 1 28 0 3 722 222 149 0 21 chr3L 17995218 17995266 -6548291 + A-rich Low_complexity Low_complexity 3 49 0 3 722 207 0 0 0 chr3L 17996320 17996343 -6547214 + (TAA)n Simple_repeat Simple_repeat 2 24 0 3 722 28 0 0 0 chr3L 17996614 17996642 -6546915 + AT_rich Low_complexity Low_complexity 1 28 0 3 722 21 36 0 0 chr3L 17997455 17997483 -6546074 + AT_rich Low_complexity Low_complexity 1 28 0 3 722 23 54 0 0 chr3L 17999151 17999188 -6544369 + AT_rich Low_complexity Low_complexity 1 37 0 3 722 23 0 0 0 chr3L 17999256 17999279 -6544278 + AT_rich Low_complexity Low_complexity 1 23 0 3 722 213 39 0 0 chr3L 18006002 18006028 -6537529 + (CAA)n Simple_repeat Simple_repeat 3 28 0 3 722 207 0 0 0 chr3L 18006397 18006420 -6537137 + (T)n Simple_repeat Simple_repeat 1 23 0 3 722 183 129 0 0 chr3L 18006450 18006481 -6537076 + (GTGTG)n Simple_repeat Simple_repeat 1 31 0 3 722 183 184 0 0 chr3L 18008789 18008827 -6534730 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 3 722 192 152 0 0 chr3L 18009737 18009770 -6533787 + (AAATG)n Simple_repeat Simple_repeat 4 36 0 3 722 30 59 0 0 chr3L 18010122 18010173 -6533384 + AT_rich Low_complexity Low_complexity 1 51 0 3 722 233 293 0 0 chr3L 18012122 18012204 -6531353 + GA-rich Low_complexity Low_complexity 2 83 0 3 722 21 0 0 0 chr3L 18013221 18013242 -6530315 + AT_rich Low_complexity Low_complexity 1 21 0 3 722 25 31 0 0 chr3L 18013720 18013752 -6529805 + AT_rich Low_complexity Low_complexity 1 32 0 3 722 37 39 0 0 chr3L 18013825 18013876 -6529681 + AT_rich Low_complexity Low_complexity 1 51 0 3 722 21 57 0 0 chr3L 18014010 18014045 -6529512 + AT_rich Low_complexity Low_complexity 1 35 0 3 722 180 0 0 0 chr3L 18015325 18015345 -6528212 + (TC)n Simple_repeat Simple_repeat 2 21 0 3 722 189 0 0 0 chr3L 18015989 18016010 -6527547 + (GA)n Simple_repeat Simple_repeat 1 21 0 3 722 22 56 0 0 chr3L 18016095 18016131 -6527426 + AT_rich Low_complexity Low_complexity 1 36 0 3 722 201 39 0 0 chr3L 18017427 18017453 -6526104 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 722 29 28 0 0 chr3L 18017537 18017573 -6525984 + AT_rich Low_complexity Low_complexity 1 36 0 3 722 220 289 0 0 chr3L 18019955 18020007 -6523550 + (CAA)n Simple_repeat Simple_repeat 1 52 0 3 722 38 39 0 0 chr3L 18020195 18020247 -6523310 + AT_rich Low_complexity Low_complexity 1 52 0 3 722 22 0 0 0 chr3L 18022043 18022065 -6521492 + AT_rich Low_complexity Low_complexity 1 22 0 3 722 22 94 0 0 chr3L 18022354 18022418 -6521139 + AT_rich Low_complexity Low_complexity 1 64 0 3 722 21 71 0 0 chr3L 18023202 18023244 -6520313 + AT_rich Low_complexity Low_complexity 1 42 0 3 722 226 0 59 0 chr3L 18024131 18024165 -6519392 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 722 198 91 0 0 chr3L 18027082 18027115 -6516442 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 722 22 0 0 0 chr3L 18027460 18027482 -6516075 + AT_rich Low_complexity Low_complexity 1 22 0 3 722 186 167 0 0 chr3L 18028342 18028378 -6515179 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 722 27 62 0 0 chr3L 18028554 18028602 -6514955 + AT_rich Low_complexity Low_complexity 1 48 0 3 722 23 0 0 0 chr3L 18031453 18031476 -6512081 + AT_rich Low_complexity Low_complexity 1 23 0 3 722 22 35 0 0 chr3L 18033284 18033313 -6510244 + AT_rich Low_complexity Low_complexity 1 29 0 3 722 28 0 0 0 chr3L 18035076 18035104 -6508453 + AT_rich Low_complexity Low_complexity 1 28 0 3 722 24 32 0 0 chr3L 18035910 18035941 -6507616 + AT_rich Low_complexity Low_complexity 1 31 0 3 722 29 28 0 0 chr3L 18036796 18036832 -6506725 + AT_rich Low_complexity Low_complexity 1 36 0 3 722 21 0 0 0 chr3L 18037335 18037356 -6506201 + AT_rich Low_complexity Low_complexity 1 21 0 3 722 21 36 0 0 chr3L 18039688 18039716 -6503841 + AT_rich Low_complexity Low_complexity 1 28 0 3 722 261 98 0 0 chr3L 18039896 18039937 -6503620 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 722 3907 2 0 0 chr3L 18040862 18041290 -6502267 + ROO_LTR LTR Pao 1 428 0 3 722 71457 1 16 2 chr3L 18041290 18049433 -6494124 + ROO_I LTR Pao 1 8256 0 3 722 3907 2 0 0 chr3L 18049433 18049861 -6493696 + ROO_LTR LTR Pao 1 428 0 3 722 22 35 0 0 chr3L 18050438 18050467 -6493090 + AT_rich Low_complexity Low_complexity 1 29 0 3 722 245 145 0 52 chr3L 18051367 18051425 -6492132 + (CTG)n Simple_repeat Simple_repeat 1 55 0 3 722 260 120 0 20 chr3L 18051500 18051551 -6492006 + (CTG)n Simple_repeat Simple_repeat 1 50 0 3 722 349 110 14 14 chr3L 18051644 18051718 -6491839 + (CTG)n Simple_repeat Simple_repeat 1 74 0 3 722 255 152 0 0 chr3L 18051836 18051882 -6491675 + (TGG)n Simple_repeat Simple_repeat 2 47 0 3 722 237 197 0 0 chr3L 18052076 18052147 -6491410 + (CTG)n Simple_repeat Simple_repeat 1 71 0 3 722 204 188 0 0 chr3L 18052481 18052513 -6491044 + (CTG)n Simple_repeat Simple_repeat 2 33 0 3 722 223 188 0 20 chr3L 18053173 18053222 -6490335 + (AGTTG)n Simple_repeat Simple_repeat 2 49 0 3 722 27 29 0 0 chr3L 18054750 18054784 -6488773 + AT_rich Low_complexity Low_complexity 1 34 0 3 722 30 45 0 0 chr3L 18056106 18056150 -6487407 + AT_rich Low_complexity Low_complexity 1 44 0 3 722 21 0 0 0 chr3L 18056213 18056234 -6487323 + AT_rich Low_complexity Low_complexity 1 21 0 3 722 26 50 0 0 chr3L 18060491 18060531 -6483026 + AT_rich Low_complexity Low_complexity 1 40 0 3 722 27 0 0 0 chr3L 18061257 18061284 -6482273 + AT_rich Low_complexity Low_complexity 1 27 0 3 722 27 0 0 0 chr3L 18061699 18061726 -6481831 + AT_rich Low_complexity Low_complexity 1 27 0 3 722 24 0 0 0 chr3L 18061971 18061995 -6481562 + AT_rich Low_complexity Low_complexity 1 24 0 3 722 39 50 0 0 chr3L 18063394 18063454 -6480103 + AT_rich Low_complexity Low_complexity 1 60 0 3 722 21 36 0 0 chr3L 18063506 18063534 -6480023 + AT_rich Low_complexity Low_complexity 1 28 0 3 722 34 0 0 0 chr3L 18063570 18063604 -6479953 + AT_rich Low_complexity Low_complexity 1 34 0 3 722 38 93 0 0 chr3L 18065371 18065479 -6478078 + AT_rich Low_complexity Low_complexity 1 108 0 3 722 55 56 0 0 chr3L 18065530 18065620 -6477937 + AT_rich Low_complexity Low_complexity 1 90 0 3 722 25 31 0 0 chr3L 18066330 18066362 -6477195 + AT_rich Low_complexity Low_complexity 1 32 0 3 722 210 37 0 0 chr3L 18071079 18071106 -6472451 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 722 30 0 0 0 chr3L 18071298 18071328 -6472229 + AT_rich Low_complexity Low_complexity 1 30 0 3 722 198 150 0 0 chr3L 18073309 18073349 -6470208 + (T)n Simple_repeat Simple_repeat 1 40 0 3 722 34 0 0 0 chr3L 18075716 18075750 -6467807 + AT_rich Low_complexity Low_complexity 1 34 0 3 722 194 62 31 0 chr3L 18077210 18077242 -6466315 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 722 180 97 0 0 chr3L 18078912 18078943 -6464614 + (TTG)n Simple_repeat Simple_repeat 1 31 0 3 722 210 71 0 0 chr3L 18079067 18079095 -6464462 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 722 1721 102 163 0 chr3L 18080852 18081177 -6462380 + DNAREP1_DM LINE Penelope 217 594 0 3 722 27 0 0 0 chr3L 18083279 18083306 -6460251 + AT_rich Low_complexity Low_complexity 1 27 0 3 722 212 159 45 0 chr3L 18084493 18084537 -6459020 + (TTAA)n Simple_repeat Simple_repeat 1 46 0 3 722 27 0 0 0 chr3L 18085978 18086005 -6457552 + AT_rich Low_complexity Low_complexity 1 27 0 3 722 23 0 0 0 chr3L 18086265 18086288 -6457269 + AT_rich Low_complexity Low_complexity 1 23 0 3 722 22 35 0 0 chr3L 18087207 18087236 -6456321 + AT_rich Low_complexity Low_complexity 1 29 0 3 723 26 30 0 0 chr3L 18088627 18088660 -6454897 + AT_rich Low_complexity Low_complexity 1 33 0 3 723 34 0 0 0 chr3L 18089424 18089458 -6454099 + AT_rich Low_complexity Low_complexity 1 34 0 3 723 24 0 0 0 chr3L 18093617 18093641 -6449916 + AT_rich Low_complexity Low_complexity 1 24 0 3 723 24 0 0 0 chr3L 18093860 18093884 -6449673 + AT_rich Low_complexity Low_complexity 1 24 0 3 723 22 0 0 0 chr3L 18094298 18094320 -6449237 + AT_rich Low_complexity Low_complexity 1 22 0 3 723 36 0 0 0 chr3L 18096294 18096330 -6447227 + AT_rich Low_complexity Low_complexity 1 36 0 3 723 192 77 0 0 chr3L 18098520 18098546 -6445011 + (ATTCG)n Simple_repeat Simple_repeat 2 27 0 3 723 21 0 0 0 chr3L 18099505 18099526 -6444031 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 378 129 0 0 chr3L 18106415 18106477 -6437080 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 723 25 0 0 0 chr3L 18106968 18106993 -6436564 + AT_rich Low_complexity Low_complexity 1 25 0 3 723 35 24 0 0 chr3L 18107119 18107161 -6436396 + AT_rich Low_complexity Low_complexity 1 42 0 3 723 21 0 0 0 chr3L 18111279 18111300 -6432257 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 24 0 0 0 chr3L 18112817 18112841 -6430716 + AT_rich Low_complexity Low_complexity 1 24 0 3 723 22 0 0 0 chr3L 18114080 18114102 -6429455 + AT_rich Low_complexity Low_complexity 1 22 0 3 723 355 216 0 177 chr3L 18115207 18115348 -6428209 - DNAREP1_DM LINE Penelope -108 486 371 3 723 218 125 0 24 chr3L 18115435 18115476 -6428081 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 723 33 56 0 0 chr3L 18116814 18116868 -6426689 + AT_rich Low_complexity Low_complexity 1 54 0 3 723 21 36 0 0 chr3L 18121059 18121087 -6422470 + AT_rich Low_complexity Low_complexity 1 28 0 3 723 22 35 0 0 chr3L 18122426 18122455 -6421102 + AT_rich Low_complexity Low_complexity 1 29 0 3 723 24 0 0 0 chr3L 18127352 18127376 -6416181 + AT_rich Low_complexity Low_complexity 1 24 0 3 723 30 69 0 0 chr3L 18127651 18127709 -6415848 + AT_rich Low_complexity Low_complexity 1 58 0 3 723 24 32 0 0 chr3L 18130145 18130176 -6413381 + AT_rich Low_complexity Low_complexity 1 31 0 3 723 22 56 0 0 chr3L 18130875 18130911 -6412646 + AT_rich Low_complexity Low_complexity 1 36 0 3 723 30 69 0 0 chr3L 18131863 18131921 -6411636 + AT_rich Low_complexity Low_complexity 1 58 0 3 723 21 0 0 0 chr3L 18137393 18137414 -6406143 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 185 0 0 39 chr3L 18138951 18138977 -6404580 + (TAAAAA)n Simple_repeat Simple_repeat 6 30 0 3 723 267 31 0 0 chr3L 18141382 18141414 -6402143 + (GA)n Simple_repeat Simple_repeat 2 33 0 3 723 21 0 0 0 chr3L 18142756 18142777 -6400780 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 36 23 0 0 chr3L 18145876 18145919 -6397638 + AT_rich Low_complexity Low_complexity 1 43 0 3 723 21 57 0 0 chr3L 18148193 18148228 -6395329 + AT_rich Low_complexity Low_complexity 1 35 0 3 723 25 95 0 0 chr3L 18150906 18150980 -6392577 + AT_rich Low_complexity Low_complexity 1 74 0 3 723 42 82 0 0 chr3L 18152796 18152894 -6390663 + AT_rich Low_complexity Low_complexity 1 98 0 3 723 30 45 0 0 chr3L 18157026 18157070 -6386487 + AT_rich Low_complexity Low_complexity 1 44 0 3 723 50 31 0 0 chr3L 18157245 18157309 -6386248 + AT_rich Low_complexity Low_complexity 1 64 0 3 723 24 77 0 0 chr3L 18157452 18157504 -6386053 + AT_rich Low_complexity Low_complexity 1 52 0 3 723 27 29 0 0 chr3L 18160482 18160516 -6383041 + AT_rich Low_complexity Low_complexity 1 34 0 3 723 41 0 0 0 chr3L 18165825 18165866 -6377691 + AT_rich Low_complexity Low_complexity 1 41 0 3 723 215 213 0 0 chr3L 18168182 18168229 -6375328 + (CCGAA)n Simple_repeat Simple_repeat 3 49 0 3 723 186 43 0 0 chr3L 18169923 18169946 -6373611 + (A)n Simple_repeat Simple_repeat 1 23 0 3 723 226 185 0 30 chr3L 18172983 18173050 -6370507 + (CCCA)n Simple_repeat Simple_repeat 1 65 0 3 723 21 0 0 0 chr3L 18177191 18177212 -6366345 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 202 258 0 0 chr3L 18178045 18178111 -6365446 + GA-rich Low_complexity Low_complexity 1 66 0 3 723 21 0 0 0 chr3L 18178884 18178905 -6364652 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 186 103 0 0 chr3L 18179740 18179769 -6363788 + (TATG)n Simple_repeat Simple_repeat 3 31 0 3 723 28 29 0 0 chr3L 18179802 18179837 -6363720 + AT_rich Low_complexity Low_complexity 1 35 0 3 723 237 159 0 0 chr3L 18180090 18180134 -6363423 + CT-rich Low_complexity Low_complexity 2 45 0 3 723 226 159 0 22 chr3L 18181487 18181532 -6362025 + (TATG)n Simple_repeat Simple_repeat 4 47 0 3 723 24 0 0 0 chr3L 18182320 18182344 -6361213 + AT_rich Low_complexity Low_complexity 1 24 0 3 723 213 216 0 0 chr3L 18182706 18182743 -6360814 + (TATG)n Simple_repeat Simple_repeat 3 39 0 3 723 620 79 0 0 chr3L 18182743 18182832 -6360725 - S_DM DNA Tc1 0 1736 1648 3 723 2823 89 0 0 chr3L 18182873 18183289 -6360268 + S_DM DNA Tc1 1321 1736 0 3 723 205 200 0 0 chr3L 18184320 18184360 -6359197 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 723 23 68 0 0 chr3L 18184507 18184551 -6359006 + AT_rich Low_complexity Low_complexity 1 44 0 3 723 207 157 0 0 chr3L 18186151 18186202 -6357355 + A-rich Low_complexity Low_complexity 6 56 0 3 723 25 31 0 0 chr3L 18187869 18187901 -6355656 + AT_rich Low_complexity Low_complexity 1 32 0 3 723 21 0 0 0 chr3L 18190004 18190025 -6353532 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 25 31 0 0 chr3L 18190692 18190724 -6352833 + AT_rich Low_complexity Low_complexity 1 32 0 3 723 24 32 0 0 chr3L 18190992 18191023 -6352534 + AT_rich Low_complexity Low_complexity 1 31 0 3 723 21 0 0 0 chr3L 18196710 18196731 -6346826 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 23 33 0 0 chr3L 18198001 18198031 -6345526 + AT_rich Low_complexity Low_complexity 1 30 0 3 723 201 0 48 71 chr3L 18198145 18198187 -6345370 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 3 723 231 133 0 0 chr3L 18198215 18198260 -6345297 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 723 195 42 0 0 chr3L 18199078 18199102 -6344455 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 723 28 0 0 0 chr3L 18199748 18199776 -6343781 + AT_rich Low_complexity Low_complexity 1 28 0 3 723 22 0 0 0 chr3L 18201868 18201890 -6341667 + AT_rich Low_complexity Low_complexity 1 22 0 3 723 26 74 0 0 chr3L 18203215 18203269 -6340288 + AT_rich Low_complexity Low_complexity 1 54 0 3 723 30 0 0 0 chr3L 18203627 18203657 -6339900 + AT_rich Low_complexity Low_complexity 1 30 0 3 723 208 121 0 0 chr3L 18205596 18205629 -6337928 + (TTTCG)n Simple_repeat Simple_repeat 2 34 0 3 723 21 71 0 0 chr3L 18212673 18212715 -6330842 + AT_rich Low_complexity Low_complexity 1 42 0 3 723 29 28 0 0 chr3L 18212763 18212799 -6330758 + AT_rich Low_complexity Low_complexity 1 36 0 3 723 21 0 0 0 chr3L 18213388 18213409 -6330148 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 25 51 0 0 chr3L 18214416 18214455 -6329102 + AT_rich Low_complexity Low_complexity 1 39 0 3 723 234 265 0 0 chr3L 18214577 18214645 -6328912 + A-rich Low_complexity Low_complexity 1 68 0 3 723 21 36 0 0 chr3L 18215079 18215107 -6328450 + AT_rich Low_complexity Low_complexity 1 28 0 3 723 23 0 0 0 chr3L 18215138 18215161 -6328396 + AT_rich Low_complexity Low_complexity 1 23 0 3 723 222 128 0 0 chr3L 18217971 18218010 -6325547 + (AACTG)n Simple_repeat Simple_repeat 5 43 0 3 723 222 37 0 0 chr3L 18218537 18218564 -6324993 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 3 723 30 0 0 0 chr3L 18218780 18218810 -6324747 + AT_rich Low_complexity Low_complexity 1 30 0 3 724 31 26 0 0 chr3L 18219820 18219858 -6323699 + AT_rich Low_complexity Low_complexity 1 38 0 3 724 28 29 0 0 chr3L 18219917 18219952 -6323605 + AT_rich Low_complexity Low_complexity 1 35 0 3 724 38 0 0 0 chr3L 18220526 18220564 -6322993 + AT_rich Low_complexity Low_complexity 1 38 0 3 724 195 42 0 0 chr3L 18221713 18221737 -6321820 + (TGG)n Simple_repeat Simple_repeat 3 26 0 3 724 30 27 0 0 chr3L 18222288 18222325 -6321232 + AT_rich Low_complexity Low_complexity 1 37 0 3 724 26 0 0 0 chr3L 18223199 18223225 -6320332 + AT_rich Low_complexity Low_complexity 1 26 0 3 724 195 162 0 0 chr3L 18224030 18224067 -6319490 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 724 28 29 0 0 chr3L 18224797 18224832 -6318725 + AT_rich Low_complexity Low_complexity 1 35 0 3 724 28 29 0 0 chr3L 18226194 18226229 -6317328 + AT_rich Low_complexity Low_complexity 1 35 0 3 724 24 0 0 0 chr3L 18226314 18226338 -6317219 + AT_rich Low_complexity Low_complexity 1 24 0 3 724 208 147 0 0 chr3L 18228011 18228045 -6315512 + (T)n Simple_repeat Simple_repeat 1 34 0 3 724 25 65 0 0 chr3L 18229610 18229656 -6313901 + AT_rich Low_complexity Low_complexity 1 46 0 3 724 203 61 30 0 chr3L 18230795 18230828 -6312729 + (TTAAA)n Simple_repeat Simple_repeat 4 37 0 3 724 206 240 0 0 chr3L 18232135 18232185 -6311372 + (CAT)n Simple_repeat Simple_repeat 1 50 0 3 724 192 212 0 0 chr3L 18232715 18232781 -6310776 + (CAA)n Simple_repeat Simple_repeat 3 68 0 3 724 180 111 0 0 chr3L 18233301 18233328 -6310229 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 3 724 223 235 0 0 chr3L 18233865 18233916 -6309641 + (CGGA)n Simple_repeat Simple_repeat 1 51 0 3 724 53 57 0 0 chr3L 18236448 18236536 -6307021 + AT_rich Low_complexity Low_complexity 1 88 0 3 724 183 129 0 0 chr3L 18236696 18236727 -6306830 + (A)n Simple_repeat Simple_repeat 1 31 0 3 724 24 0 0 0 chr3L 18237350 18237374 -6306183 + AT_rich Low_complexity Low_complexity 1 24 0 3 724 27 29 0 0 chr3L 18237472 18237506 -6306051 + AT_rich Low_complexity Low_complexity 1 34 0 3 724 21 0 0 0 chr3L 18238938 18238959 -6304598 + AT_rich Low_complexity Low_complexity 1 21 0 3 724 24 0 0 0 chr3L 18244261 18244285 -6299272 + AT_rich Low_complexity Low_complexity 1 24 0 3 724 24 0 0 0 chr3L 18247579 18247603 -6295954 + AT_rich Low_complexity Low_complexity 1 24 0 3 724 36 53 0 0 chr3L 18250856 18250913 -6292644 + AT_rich Low_complexity Low_complexity 1 57 0 3 724 25 0 0 0 chr3L 18254765 18254790 -6288767 + AT_rich Low_complexity Low_complexity 1 25 0 3 724 24 0 0 0 chr3L 18256564 18256588 -6286969 + AT_rich Low_complexity Low_complexity 1 24 0 3 724 46 19 0 0 chr3L 18258316 18258369 -6285188 + AT_rich Low_complexity Low_complexity 1 53 0 3 724 33 0 0 0 chr3L 18260201 18260234 -6283323 + AT_rich Low_complexity Low_complexity 1 33 0 3 724 192 125 0 0 chr3L 18265954 18265986 -6277571 + (CCCGAA)n Simple_repeat Simple_repeat 2 33 0 3 724 219 88 0 0 chr3L 18266029 18266063 -6277494 + (ACTG)n Simple_repeat Simple_repeat 3 36 0 3 724 21 71 0 0 chr3L 18266326 18266368 -6277189 + AT_rich Low_complexity Low_complexity 1 42 0 3 724 35 0 0 0 chr3L 18266389 18266424 -6277133 + AT_rich Low_complexity Low_complexity 1 35 0 3 724 22 70 0 0 chr3L 18271974 18272017 -6271540 + AT_rich Low_complexity Low_complexity 1 43 0 3 724 31 68 0 0 chr3L 18275562 18275621 -6267936 + AT_rich Low_complexity Low_complexity 1 59 0 3 724 22 35 0 0 chr3L 18279896 18279925 -6263632 + AT_rich Low_complexity Low_complexity 1 29 0 3 724 23 0 0 0 chr3L 18283673 18283696 -6259861 + AT_rich Low_complexity Low_complexity 1 23 0 3 724 34 42 0 0 chr3L 18284637 18284685 -6258872 + AT_rich Low_complexity Low_complexity 1 48 0 3 724 25 65 0 0 chr3L 18287425 18287471 -6256086 + AT_rich Low_complexity Low_complexity 1 46 0 3 724 22 0 0 0 chr3L 18290665 18290687 -6252870 + AT_rich Low_complexity Low_complexity 1 22 0 3 724 26 74 0 0 chr3L 18290702 18290756 -6252801 + AT_rich Low_complexity Low_complexity 1 54 0 3 724 27 0 0 0 chr3L 18291863 18291890 -6251667 + AT_rich Low_complexity Low_complexity 1 27 0 3 724 25 0 0 0 chr3L 18292751 18292776 -6250781 + AT_rich Low_complexity Low_complexity 1 25 0 3 724 23 33 0 0 chr3L 18293894 18293924 -6249633 + AT_rich Low_complexity Low_complexity 1 30 0 3 724 29 78 0 0 chr3L 18295604 18295668 -6247889 + AT_rich Low_complexity Low_complexity 1 64 0 3 724 30 27 0 0 chr3L 18295810 18295847 -6247710 + AT_rich Low_complexity Low_complexity 1 37 0 3 724 232 227 10 40 chr3L 18297032 18297133 -6246424 - ROO_I LTR Pao -7515 741 644 3 724 31 68 0 0 chr3L 18298710 18298769 -6244788 + AT_rich Low_complexity Low_complexity 1 59 0 3 724 30 0 0 0 chr3L 18300480 18300510 -6243047 + AT_rich Low_complexity Low_complexity 1 30 0 3 724 21 0 0 0 chr3L 18301734 18301755 -6241802 + AT_rich Low_complexity Low_complexity 1 21 0 3 724 23 86 0 0 chr3L 18303448 18303506 -6240051 + AT_rich Low_complexity Low_complexity 1 58 0 3 724 43 64 0 0 chr3L 18304638 18304716 -6238841 + AT_rich Low_complexity Low_complexity 1 78 0 3 724 21 36 0 0 chr3L 18310375 18310403 -6233154 + AT_rich Low_complexity Low_complexity 1 28 0 3 724 25 0 0 0 chr3L 18312431 18312456 -6231101 + AT_rich Low_complexity Low_complexity 1 25 0 3 724 23 54 0 0 chr3L 18317279 18317316 -6226241 + AT_rich Low_complexity Low_complexity 1 37 0 3 724 33 66 0 0 chr3L 18318862 18318923 -6224634 + AT_rich Low_complexity Low_complexity 1 61 0 3 724 25 75 0 0 chr3L 18318996 18319049 -6224508 + AT_rich Low_complexity Low_complexity 1 53 0 3 724 21 36 0 0 chr3L 18319075 18319103 -6224454 + AT_rich Low_complexity Low_complexity 1 28 0 3 724 24 32 0 0 chr3L 18321995 18322026 -6221531 + AT_rich Low_complexity Low_complexity 1 31 0 3 724 25 31 0 0 chr3L 18323001 18323033 -6220524 + AT_rich Low_complexity Low_complexity 1 32 0 3 724 21 0 0 0 chr3L 18326291 18326312 -6217245 + AT_rich Low_complexity Low_complexity 1 21 0 3 724 26 64 0 0 chr3L 18330027 18330074 -6213483 + AT_rich Low_complexity Low_complexity 1 47 0 3 724 189 0 0 0 chr3L 18330074 18330095 -6213462 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 3 724 28 48 0 0 chr3L 18333283 18333325 -6210232 + AT_rich Low_complexity Low_complexity 1 42 0 3 724 24 67 0 0 chr3L 18335058 18335103 -6208454 + AT_rich Low_complexity Low_complexity 1 45 0 3 724 30 27 0 0 chr3L 18336069 18336106 -6207451 + AT_rich Low_complexity Low_complexity 1 37 0 3 724 23 68 0 0 chr3L 18337745 18337789 -6205768 + AT_rich Low_complexity Low_complexity 1 44 0 3 724 42 20 0 0 chr3L 18337855 18337904 -6205653 + AT_rich Low_complexity Low_complexity 1 49 0 3 724 198 0 0 0 chr3L 18338514 18338536 -6205021 + (GA)n Simple_repeat Simple_repeat 2 23 0 3 724 30 27 0 0 chr3L 18345342 18345379 -6198178 + AT_rich Low_complexity Low_complexity 1 37 0 3 724 21 36 0 0 chr3L 18346037 18346065 -6197492 + AT_rich Low_complexity Low_complexity 1 28 0 3 724 25 0 0 0 chr3L 18348871 18348896 -6194661 + AT_rich Low_complexity Low_complexity 1 25 0 3 725 21 36 0 0 chr3L 18351603 18351631 -6191926 + AT_rich Low_complexity Low_complexity 1 28 0 3 725 43 92 0 0 chr3L 18351652 18351772 -6191785 + AT_rich Low_complexity Low_complexity 1 120 0 3 725 215 174 0 21 chr3L 18359546 18359593 -6183964 + T-rich Low_complexity Low_complexity 5 50 0 3 725 22 99 0 0 chr3L 18360139 18360210 -6183347 + AT_rich Low_complexity Low_complexity 1 71 0 3 725 41 58 0 0 chr3L 18360268 18360337 -6183220 + AT_rich Low_complexity Low_complexity 1 69 0 3 725 31 88 0 0 chr3L 18360405 18360485 -6183072 + AT_rich Low_complexity Low_complexity 1 80 0 3 725 25 75 0 0 chr3L 18362037 18362090 -6181467 + AT_rich Low_complexity Low_complexity 1 53 0 3 725 198 220 0 0 chr3L 18365685 18365744 -6177813 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 725 30 59 0 0 chr3L 18370102 18370153 -6173404 + AT_rich Low_complexity Low_complexity 1 51 0 3 725 24 53 0 0 chr3L 18372972 18373010 -6170547 + AT_rich Low_complexity Low_complexity 1 38 0 3 725 24 0 0 0 chr3L 18374458 18374482 -6169075 + AT_rich Low_complexity Low_complexity 1 24 0 3 725 189 0 0 0 chr3L 18381743 18381764 -6161793 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 725 23 0 0 0 chr3L 18381926 18381949 -6161608 + AT_rich Low_complexity Low_complexity 1 23 0 3 725 45 34 0 0 chr3L 18382417 18382476 -6161081 + AT_rich Low_complexity Low_complexity 1 59 0 3 725 27 0 0 0 chr3L 18383374 18383401 -6160156 + AT_rich Low_complexity Low_complexity 1 27 0 3 725 44 99 0 0 chr3L 18385302 18385444 -6158113 + AT_rich Low_complexity Low_complexity 1 142 0 3 725 26 0 0 0 chr3L 18389877 18389903 -6153654 + AT_rich Low_complexity Low_complexity 1 26 0 3 725 338 70 0 34 chr3L 18390229 18390288 -6153269 + (TTA)n Simple_repeat Simple_repeat 2 58 0 3 725 24 0 0 0 chr3L 18392097 18392121 -6151436 + AT_rich Low_complexity Low_complexity 1 24 0 3 725 54 56 0 0 chr3L 18395866 18395955 -6147602 + AT_rich Low_complexity Low_complexity 1 89 0 3 725 30 0 0 0 chr3L 18397205 18397235 -6146322 + AT_rich Low_complexity Low_complexity 1 30 0 3 725 22 0 0 0 chr3L 18398139 18398161 -6145396 + AT_rich Low_complexity Low_complexity 1 22 0 3 725 24 0 0 0 chr3L 18399738 18399762 -6143795 + AT_rich Low_complexity Low_complexity 1 24 0 3 725 31 0 0 0 chr3L 18400110 18400141 -6143416 + AT_rich Low_complexity Low_complexity 1 31 0 3 725 189 121 0 0 chr3L 18400888 18400921 -6142636 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 3 725 25 65 0 0 chr3L 18403975 18404021 -6139536 + AT_rich Low_complexity Low_complexity 1 46 0 3 725 189 0 0 0 chr3L 18405595 18405616 -6137941 + (GCTG)n Simple_repeat Simple_repeat 4 24 0 3 725 33 56 0 0 chr3L 18405960 18406014 -6137543 + AT_rich Low_complexity Low_complexity 1 54 0 3 725 267 114 0 0 chr3L 18406658 18406702 -6136855 + (TGG)n Simple_repeat Simple_repeat 2 45 0 3 725 47 33 0 0 chr3L 18408071 18408132 -6135425 + AT_rich Low_complexity Low_complexity 1 61 0 3 725 208 135 0 0 chr3L 18408373 18408410 -6135147 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 725 186 71 0 0 chr3L 18409172 18409200 -6134357 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 725 31 58 0 0 chr3L 18411471 18411523 -6132034 + AT_rich Low_complexity Low_complexity 1 52 0 3 725 24 0 0 0 chr3L 18411584 18411608 -6131949 + AT_rich Low_complexity Low_complexity 1 24 0 3 725 39 104 0 0 chr3L 18414320 18414464 -6129093 + AT_rich Low_complexity Low_complexity 1 144 0 3 725 26 30 0 0 chr3L 18415556 18415589 -6127968 + AT_rich Low_complexity Low_complexity 1 33 0 3 725 23 33 0 0 chr3L 18419154 18419184 -6124373 + AT_rich Low_complexity Low_complexity 1 30 0 3 725 30 59 0 0 chr3L 18419869 18419920 -6123637 + AT_rich Low_complexity Low_complexity 1 51 0 3 725 189 0 0 0 chr3L 18421247 18421268 -6122289 + (TTCCC)n Simple_repeat Simple_repeat 1 21 0 3 725 31 58 0 0 chr3L 18423285 18423337 -6120220 + AT_rich Low_complexity Low_complexity 1 52 0 3 725 26 50 0 0 chr3L 18425172 18425212 -6118345 + AT_rich Low_complexity Low_complexity 1 40 0 3 725 23 68 0 0 chr3L 18425240 18425284 -6118273 + AT_rich Low_complexity Low_complexity 1 44 0 3 725 209 179 0 0 chr3L 18426370 18426409 -6117148 + (CACCAT)n Simple_repeat Simple_repeat 5 43 0 3 725 22 0 0 0 chr3L 18429377 18429399 -6114158 + AT_rich Low_complexity Low_complexity 1 22 0 3 725 25 51 0 0 chr3L 18431919 18431958 -6111599 + AT_rich Low_complexity Low_complexity 1 39 0 3 725 267 114 0 0 chr3L 18433147 18433191 -6110366 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 725 25 0 0 0 chr3L 18436792 18436817 -6106740 + AT_rich Low_complexity Low_complexity 1 25 0 3 725 38 75 0 0 chr3L 18439174 18439254 -6104303 + AT_rich Low_complexity Low_complexity 1 80 0 3 725 22 88 0 0 chr3L 18441740 18441797 -6101760 + AT_rich Low_complexity Low_complexity 1 57 0 3 725 30 0 0 0 chr3L 18442113 18442143 -6101414 + AT_rich Low_complexity Low_complexity 1 30 0 3 725 21 71 0 0 chr3L 18443895 18443937 -6099620 + AT_rich Low_complexity Low_complexity 1 42 0 3 725 238 98 39 0 chr3L 18445142 18445193 -6098364 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 3 725 27 29 0 0 chr3L 18446144 18446178 -6097379 + AT_rich Low_complexity Low_complexity 1 34 0 3 725 24 53 0 0 chr3L 18446242 18446280 -6097277 + AT_rich Low_complexity Low_complexity 1 38 0 3 725 519 65 39 31 chr3L 18446321 18446448 -6097109 + (TAA)n Simple_repeat Simple_repeat 3 130 0 3 725 225 0 0 0 chr3L 18446660 18446685 -6096872 + (GAGTG)n Simple_repeat Simple_repeat 1 25 0 3 725 21 36 0 0 chr3L 18447126 18447154 -6096403 + AT_rich Low_complexity Low_complexity 1 28 0 3 725 32 43 0 42 chr3L 18447214 18447286 -6096271 + AT_rich Low_complexity Low_complexity 1 69 0 3 725 23 0 0 0 chr3L 18448715 18448738 -6094819 + AT_rich Low_complexity Low_complexity 1 23 0 3 725 22 0 0 0 chr3L 18451869 18451891 -6091666 + AT_rich Low_complexity Low_complexity 1 22 0 3 725 22 35 0 0 chr3L 18451962 18451991 -6091566 + AT_rich Low_complexity Low_complexity 1 29 0 3 725 27 73 0 0 chr3L 18452548 18452603 -6090954 + AT_rich Low_complexity Low_complexity 1 55 0 3 725 28 0 0 0 chr3L 18452989 18453017 -6090540 + AT_rich Low_complexity Low_complexity 1 28 0 3 725 26 30 0 0 chr3L 18454207 18454240 -6089317 + AT_rich Low_complexity Low_complexity 1 33 0 3 725 24 32 0 0 chr3L 18454312 18454343 -6089214 + AT_rich Low_complexity Low_complexity 1 31 0 3 725 26 50 0 0 chr3L 18456602 18456642 -6086915 + AT_rich Low_complexity Low_complexity 1 40 0 3 725 945 121 58 56 chr3L 18456794 18457213 -6086344 - DNAREP1_DM LINE Penelope -262 332 120 3 725 21 57 0 0 chr3L 18458030 18458065 -6085492 + AT_rich Low_complexity Low_complexity 1 35 0 3 725 246 220 0 0 chr3L 18458385 18458435 -6085122 + (CAT)n Simple_repeat Simple_repeat 1 50 0 3 725 432 55 18 0 chr3L 18462924 18462979 -6080578 + Gypsy2_I LTR Gypsy 1199 1254 -4881 3 725 1884 146 134 15 chr3L 18462977 18463389 -6080168 + Gypsy2_I LTR Gypsy 1369 1873 -5139 3 725 5635 129 45 23 chr3L 18463424 18464391 -6079166 + Gypsy2_I LTR Gypsy 3550 4538 -1597 3 725 353 225 0 0 chr3L 18468968 18469039 -6074518 - DNAREP1_DM LINE Penelope -517 77 7 3 725 21 0 0 0 chr3L 18479541 18479562 -6063995 + AT_rich Low_complexity Low_complexity 1 21 0 3 725 25 75 0 0 chr3L 18480636 18480689 -6062868 + AT_rich Low_complexity Low_complexity 1 53 0 3 725 33 25 0 0 chr3L 18480706 18480746 -6062811 + AT_rich Low_complexity Low_complexity 1 40 0 3 726 180 0 0 0 chr3L 18481865 18481885 -6061672 + (TCC)n Simple_repeat Simple_repeat 2 21 0 3 726 64 26 0 0 chr3L 18482127 18482205 -6061352 + AT_rich Low_complexity Low_complexity 1 78 0 3 726 31 31 0 59 chr3L 18483584 18483652 -6059905 + AT_rich Low_complexity Low_complexity 1 64 0 3 726 27 0 0 0 chr3L 18485756 18485783 -6057774 + AT_rich Low_complexity Low_complexity 1 27 0 3 726 23 0 0 0 chr3L 18486402 18486425 -6057132 + AT_rich Low_complexity Low_complexity 1 23 0 3 726 26 101 0 0 chr3L 18487148 18487237 -6056320 + AT_rich Low_complexity Low_complexity 1 89 0 3 726 22 0 0 0 chr3L 18487531 18487553 -6056004 + AT_rich Low_complexity Low_complexity 1 22 0 3 726 28 0 0 0 chr3L 18490592 18490620 -6052937 + AT_rich Low_complexity Low_complexity 1 28 0 3 726 22 35 0 0 chr3L 18494659 18494688 -6048869 + AT_rich Low_complexity Low_complexity 1 29 0 3 726 198 0 0 0 chr3L 18495017 18495039 -6048518 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 726 189 107 0 0 chr3L 18495064 18495092 -6048465 + (CAACT)n Simple_repeat Simple_repeat 5 32 0 3 726 23 54 0 0 chr3L 18497177 18497214 -6046343 + AT_rich Low_complexity Low_complexity 1 37 0 3 726 324 111 37 0 chr3L 18498131 18498185 -6045372 - DNAREP1_DM LINE Penelope 0 594 539 3 726 284 220 0 0 chr3L 18498363 18498422 -6045135 - DNAREP1_DM LINE Penelope -535 59 1 3 726 24 32 0 0 chr3L 18498668 18498699 -6044858 + AT_rich Low_complexity Low_complexity 1 31 0 3 726 6400 4 0 0 chr3L 18499285 18500000 -6043557 + FW_DM LINE Jockey 1294 2008 -2684 3 726 23248 0 0 0 chr3L 18500000 18502684 -6040873 + FW_DM LINE Jockey 2009 4692 0 3 726 21 0 0 0 chr3L 18504121 18504142 -6039415 + AT_rich Low_complexity Low_complexity 1 21 0 3 726 44706 1 0 1 chr3L 18508065 18513190 -6030367 + BS LINE Jockey 4 5124 -2 3 726 3741 2 0 0 chr3L 18521782 18522210 -6021347 - ROO_LTR LTR Pao 0 428 1 3 726 70311 1 1 0 chr3L 18522210 18530456 -6013101 - ROO_I LTR Pao 0 8256 1 3 726 3736 0 0 2 chr3L 18530456 18530885 -6012672 - ROO_LTR LTR Pao 0 428 1 3 726 22 0 0 0 chr3L 18530957 18530979 -6012578 + AT_rich Low_complexity Low_complexity 1 22 0 3 726 32 26 0 0 chr3L 18534123 18534162 -6009395 + AT_rich Low_complexity Low_complexity 1 39 0 3 726 27 49 0 0 chr3L 18534923 18534964 -6008593 + AT_rich Low_complexity Low_complexity 1 41 0 3 726 189 74 0 0 chr3L 18536554 18536581 -6006976 + (CATA)n Simple_repeat Simple_repeat 2 28 0 3 726 26 64 0 0 chr3L 18538765 18538812 -6004745 + AT_rich Low_complexity Low_complexity 1 47 0 3 726 22 0 0 0 chr3L 18539401 18539423 -6004134 + AT_rich Low_complexity Low_complexity 1 22 0 3 726 317 0 0 70 chr3L 18542953 18543010 -6000547 + (TTA)n Simple_repeat Simple_repeat 1 53 0 3 726 26 50 0 0 chr3L 18543096 18543136 -6000421 + AT_rich Low_complexity Low_complexity 1 40 0 3 726 25 0 0 0 chr3L 18544334 18544359 -5999198 + AT_rich Low_complexity Low_complexity 1 25 0 3 726 29 28 0 0 chr3L 18548993 18549029 -5994528 + AT_rich Low_complexity Low_complexity 1 36 0 3 726 24 32 0 0 chr3L 18549142 18549173 -5994384 + AT_rich Low_complexity Low_complexity 1 31 0 3 726 213 39 0 0 chr3L 18549715 18549741 -5993816 + (TCCA)n Simple_repeat Simple_repeat 2 27 0 3 726 21 0 0 0 chr3L 18555454 18555475 -5988082 + AT_rich Low_complexity Low_complexity 1 21 0 3 726 25 0 0 0 chr3L 18556433 18556458 -5987099 + AT_rich Low_complexity Low_complexity 1 25 0 3 726 21 0 0 0 chr3L 18556559 18556580 -5986977 + AT_rich Low_complexity Low_complexity 1 21 0 3 726 31 58 0 0 chr3L 18557551 18557603 -5985954 + AT_rich Low_complexity Low_complexity 1 52 0 3 726 613 138 134 76 chr3L 18560980 18561152 -5982405 + DNAREP1_DM LINE Penelope 397 578 -16 3 726 22 70 0 0 chr3L 18561199 18561242 -5982315 + AT_rich Low_complexity Low_complexity 1 43 0 3 726 22 35 0 0 chr3L 18562259 18562288 -5981269 + AT_rich Low_complexity Low_complexity 1 29 0 3 726 26 74 0 0 chr3L 18565222 18565276 -5978281 + AT_rich Low_complexity Low_complexity 1 54 0 3 726 21 36 0 0 chr3L 18566256 18566284 -5977273 + AT_rich Low_complexity Low_complexity 1 28 0 3 726 26 50 0 0 chr3L 18571211 18571251 -5972306 + AT_rich Low_complexity Low_complexity 1 40 0 3 726 26 0 0 0 chr3L 18571901 18571927 -5971630 + AT_rich Low_complexity Low_complexity 1 26 0 3 726 23 54 0 0 chr3L 18573342 18573379 -5970178 + AT_rich Low_complexity Low_complexity 1 37 0 3 726 25 0 0 0 chr3L 18579056 18579081 -5964476 + AT_rich Low_complexity Low_complexity 1 25 0 3 726 21 0 0 0 chr3L 18583226 18583247 -5960310 + AT_rich Low_complexity Low_complexity 1 21 0 3 726 5340 32 6 6 chr3L 18583802 18584483 -5959074 - DMCR1A LINE CR1 0 4470 3790 3 726 16340 7 0 1 chr3L 18587103 18589023 -5954534 + DOC LINE Jockey 2807 4725 0 3 726 24 0 0 0 chr3L 18589470 18589494 -5954063 + AT_rich Low_complexity Low_complexity 1 24 0 3 726 258 32 0 0 chr3L 18590860 18590891 -5952666 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 726 30 77 0 0 chr3L 18593230 18593295 -5950262 + AT_rich Low_complexity Low_complexity 1 65 0 3 726 25 65 0 0 chr3L 18595344 18595390 -5948167 + AT_rich Low_complexity Low_complexity 1 46 0 3 726 26 0 0 0 chr3L 18596161 18596187 -5947370 + AT_rich Low_complexity Low_complexity 1 26 0 3 726 22 56 0 0 chr3L 18606682 18606718 -5936839 + AT_rich Low_complexity Low_complexity 1 36 0 3 726 21 0 0 0 chr3L 18609327 18609348 -5934209 + AT_rich Low_complexity Low_complexity 1 21 0 3 726 21 0 0 0 chr3L 18611103 18611124 -5932433 + AT_rich Low_complexity Low_complexity 1 21 0 3 727 208 216 0 0 chr3L 18614828 18614865 -5928692 + (CTG)n Simple_repeat Simple_repeat 2 38 0 3 727 186 43 0 0 chr3L 18614940 18614963 -5928594 + (CTG)n Simple_repeat Simple_repeat 2 24 0 3 727 24 53 0 0 chr3L 18618506 18618544 -5925013 + AT_rich Low_complexity Low_complexity 1 38 0 3 727 27 0 0 0 chr3L 18618817 18618844 -5924713 + AT_rich Low_complexity Low_complexity 1 27 0 3 727 24 0 0 0 chr3L 18619480 18619504 -5924053 + AT_rich Low_complexity Low_complexity 1 24 0 3 727 201 167 0 0 chr3L 18619569 18619605 -5923952 + A-rich Low_complexity Low_complexity 1 36 0 3 727 215 150 0 24 chr3L 18619979 18620020 -5923537 + (ATTCG)n Simple_repeat Simple_repeat 3 42 0 3 727 32 81 0 0 chr3L 18621405 18621479 -5922078 + AT_rich Low_complexity Low_complexity 1 74 0 3 727 21 36 0 0 chr3L 18625881 18625909 -5917648 + AT_rich Low_complexity Low_complexity 1 28 0 3 727 26 0 0 0 chr3L 18626132 18626158 -5917399 + AT_rich Low_complexity Low_complexity 1 26 0 3 727 27 49 0 0 chr3L 18626838 18626879 -5916678 + AT_rich Low_complexity Low_complexity 1 41 0 3 727 22 109 0 0 chr3L 18627244 18627336 -5916221 + AT_rich Low_complexity Low_complexity 1 92 0 3 727 22 0 0 0 chr3L 18629626 18629648 -5913909 + AT_rich Low_complexity Low_complexity 1 22 0 3 727 31 26 0 0 chr3L 18629663 18629701 -5913856 + AT_rich Low_complexity Low_complexity 1 38 0 3 727 34 24 0 0 chr3L 18630374 18630415 -5913142 + AT_rich Low_complexity Low_complexity 1 41 0 3 727 182 37 37 0 chr3L 18631949 18631976 -5911581 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 3 727 228 276 0 0 chr3L 18633900 18633976 -5909581 + CT-rich Low_complexity Low_complexity 2 77 0 3 727 27 62 0 0 chr3L 18634308 18634356 -5909201 + AT_rich Low_complexity Low_complexity 1 48 0 3 727 204 312 0 0 chr3L 18634943 18635039 -5908518 + A-rich Low_complexity Low_complexity 1 96 0 3 727 25 31 0 0 chr3L 18636429 18636461 -5907096 + AT_rich Low_complexity Low_complexity 1 32 0 3 727 24 0 0 0 chr3L 18638612 18638636 -5904921 + AT_rich Low_complexity Low_complexity 1 24 0 3 727 24 96 0 0 chr3L 18639944 18640017 -5903540 + AT_rich Low_complexity Low_complexity 1 73 0 3 727 27 62 0 0 chr3L 18640929 18640977 -5902580 + AT_rich Low_complexity Low_complexity 1 48 0 3 727 27 0 0 0 chr3L 18641099 18641126 -5902431 + AT_rich Low_complexity Low_complexity 1 27 0 3 727 231 36 0 0 chr3L 18643692 18643720 -5899837 + (CAT)n Simple_repeat Simple_repeat 3 30 0 3 727 31 26 0 0 chr3L 18645957 18645995 -5897562 + AT_rich Low_complexity Low_complexity 1 38 0 3 727 25 51 0 0 chr3L 18646125 18646164 -5897393 + AT_rich Low_complexity Low_complexity 1 39 0 3 727 25 31 0 0 chr3L 18646458 18646490 -5897067 + AT_rich Low_complexity Low_complexity 1 32 0 3 727 225 0 0 0 chr3L 18649535 18649560 -5893997 + (A)n Simple_repeat Simple_repeat 1 25 0 3 727 31 26 0 0 chr3L 18654401 18654439 -5889118 + AT_rich Low_complexity Low_complexity 1 38 0 3 727 235 179 9 95 chr3L 18654649 18654754 -5888803 + ROO_I LTR Pao 641 736 -7520 3 727 490 160 0 23 chr3L 18658820 18658948 -5884609 + (CAG)n Simple_repeat Simple_repeat 1 125 0 3 727 233 122 0 58 chr3L 18659125 18659177 -5884380 + (CAA)n Simple_repeat Simple_repeat 1 49 0 3 727 34 0 0 0 chr3L 18660712 18660746 -5882811 + AT_rich Low_complexity Low_complexity 1 34 0 3 727 273 128 0 0 chr3L 18662971 18663018 -5880539 + (CTG)n Simple_repeat Simple_repeat 1 47 0 3 727 218 191 0 0 chr3L 18663212 18663259 -5880298 + (CTG)n Simple_repeat Simple_repeat 3 49 0 3 727 21 0 0 0 chr3L 18667205 18667226 -5876331 + AT_rich Low_complexity Low_complexity 1 21 0 3 727 25 31 0 0 chr3L 18668721 18668753 -5874804 + AT_rich Low_complexity Low_complexity 1 32 0 3 727 33 73 0 0 chr3L 18675035 18675103 -5868454 + AT_rich Low_complexity Low_complexity 1 68 0 3 727 24 0 0 0 chr3L 18678838 18678862 -5864695 + AT_rich Low_complexity Low_complexity 1 24 0 3 727 49 32 0 0 chr3L 18683805 18683868 -5859689 + AT_rich Low_complexity Low_complexity 1 63 0 3 727 204 97 0 0 chr3L 18684672 18684703 -5858854 + (A)n Simple_repeat Simple_repeat 1 31 0 3 727 180 77 0 0 chr3L 18685912 18685938 -5857619 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 727 21 36 0 0 chr3L 18691125 18691153 -5852404 + AT_rich Low_complexity Low_complexity 1 28 0 3 727 28 0 0 0 chr3L 18692462 18692490 -5851067 + AT_rich Low_complexity Low_complexity 1 28 0 3 727 26 30 0 0 chr3L 18692553 18692586 -5850971 + AT_rich Low_complexity Low_complexity 1 33 0 3 727 28 29 0 0 chr3L 18693421 18693456 -5850101 + AT_rich Low_complexity Low_complexity 1 35 0 3 727 26 50 0 0 chr3L 18695784 18695824 -5847733 + AT_rich Low_complexity Low_complexity 1 40 0 3 727 324 169 37 49 chr3L 18695842 18695923 -5847634 + DNAREP1_DM LINE Penelope 13 92 -502 3 727 255 227 0 0 chr3L 18697576 18697642 -5845915 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 727 25 0 0 0 chr3L 18697944 18697969 -5845588 + AT_rich Low_complexity Low_complexity 1 25 0 3 727 3872 0 0 2 chr3L 18703913 18704338 -5839219 - Stalker2_LTR LTR Gypsy 0 424 1 3 727 41072 19 6 3 chr3L 18704338 18709588 -5833969 - Stalker2_I LTR Gypsy 0 6530 1574 3 727 14104 4 2 4 chr3L 18709787 18711383 -5832174 - Stalker2_I LTR Gypsy -5810 1592 1 3 727 3872 0 0 2 chr3L 18711383 18711808 -5831749 - Stalker2_LTR LTR Gypsy 0 424 1 3 727 295 273 20 0 chr3L 18712643 18712742 -5830815 + (ACTG)n Simple_repeat Simple_repeat 3 103 0 3 727 31 58 0 0 chr3L 18720003 18720055 -5823502 + AT_rich Low_complexity Low_complexity 1 52 0 3 727 30 0 0 0 chr3L 18720895 18720925 -5822632 + AT_rich Low_complexity Low_complexity 1 30 0 3 727 31 26 0 0 chr3L 18722844 18722882 -5820675 + AT_rich Low_complexity Low_complexity 1 38 0 3 727 33 25 0 0 chr3L 18724223 18724263 -5819294 + AT_rich Low_complexity Low_complexity 1 40 0 3 727 183 42 0 0 chr3L 18725179 18725203 -5818354 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 727 21 0 0 0 chr3L 18725290 18725311 -5818246 + AT_rich Low_complexity Low_complexity 1 21 0 3 727 28 0 0 0 chr3L 18727460 18727488 -5816069 + AT_rich Low_complexity Low_complexity 1 28 0 3 727 186 103 0 0 chr3L 18728842 18728871 -5814686 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 727 29 0 0 0 chr3L 18729222 18729251 -5814306 + AT_rich Low_complexity Low_complexity 1 29 0 3 727 23 0 0 0 chr3L 18730729 18730752 -5812805 + AT_rich Low_complexity Low_complexity 1 23 0 3 727 25 0 0 0 chr3L 18730773 18730798 -5812759 + AT_rich Low_complexity Low_complexity 1 25 0 3 727 227 79 0 26 chr3L 18731132 18731171 -5812386 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 727 209 196 0 42 chr3L 18731334 18731382 -5812175 + (TATATG)n Simple_repeat Simple_repeat 5 50 0 3 727 21 36 0 0 chr3L 18733335 18733363 -5810194 + AT_rich Low_complexity Low_complexity 1 28 0 3 727 22 0 0 0 chr3L 18733424 18733446 -5810111 + AT_rich Low_complexity Low_complexity 1 22 0 3 727 242 73 24 0 chr3L 18733747 18733788 -5809769 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 727 221 229 57 0 chr3L 18735706 18735776 -5807781 + T-rich Low_complexity Low_complexity 3 76 0 3 727 1613 96 42 31 chr3L 18735994 18736283 -5807274 - DNAREP1_DM LINE Penelope -302 292 1 3 727 34 79 0 0 chr3L 18736489 18736565 -5806992 + AT_rich Low_complexity Low_complexity 1 76 0 3 727 299 47 61 30 chr3L 18736644 18736710 -5806847 + (TATAA)n Simple_repeat Simple_repeat 5 72 0 3 727 306 125 12 12 chr3L 18739437 18739518 -5804039 + ROO_I LTR Pao 640 720 -7536 3 728 31 0 0 0 chr3L 18746544 18746575 -5796982 + AT_rich Low_complexity Low_complexity 1 31 0 3 728 244 208 0 0 chr3L 18747024 18747077 -5796480 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 3 728 23 33 0 0 chr3L 18748032 18748062 -5795495 + AT_rich Low_complexity Low_complexity 1 30 0 3 728 228 216 0 0 chr3L 18748396 18748447 -5795110 + (CTG)n Simple_repeat Simple_repeat 3 53 0 3 728 314 61 20 0 chr3L 18751391 18751440 -5792117 + (TAA)n Simple_repeat Simple_repeat 1 50 0 3 728 261 188 36 36 chr3L 18752202 18752285 -5791272 + (CGAAA)n Simple_repeat Simple_repeat 3 85 0 3 728 207 245 0 0 chr3L 18752579 18752628 -5790929 + (CCG)n Simple_repeat Simple_repeat 1 49 0 3 728 27 73 0 0 chr3L 18752893 18752948 -5790609 + AT_rich Low_complexity Low_complexity 1 55 0 3 728 24 32 0 0 chr3L 18753026 18753057 -5790500 + AT_rich Low_complexity Low_complexity 1 31 0 3 728 202 286 0 0 chr3L 18754021 18754077 -5789480 + (TATG)n Simple_repeat Simple_repeat 3 58 0 3 728 201 74 0 0 chr3L 18754092 18754119 -5789438 + (TATG)n Simple_repeat Simple_repeat 1 27 0 3 728 32 26 0 0 chr3L 18754550 18754589 -5788968 + AT_rich Low_complexity Low_complexity 1 39 0 3 728 21 0 0 0 chr3L 18756133 18756154 -5787403 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 233 239 0 40 chr3L 18756852 18756926 -5786631 + (CCG)n Simple_repeat Simple_repeat 3 73 0 3 728 352 244 0 17 chr3L 18757018 18757135 -5786422 - ROO_I LTR Pao -7505 751 637 3 728 293 198 31 0 chr3L 18757271 18757367 -5786190 - ROO_I LTR Pao -7518 738 640 3 728 200 242 48 0 chr3L 18758092 18758154 -5785403 + T-rich Low_complexity Low_complexity 4 68 0 3 728 25 0 0 0 chr3L 18758760 18758785 -5784772 + AT_rich Low_complexity Low_complexity 1 25 0 3 728 189 121 0 0 chr3L 18759038 18759071 -5784486 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 728 207 0 0 0 chr3L 18759861 18759884 -5783673 + (T)n Simple_repeat Simple_repeat 1 23 0 3 728 31 0 0 0 chr3L 18760161 18760192 -5783365 + AT_rich Low_complexity Low_complexity 1 31 0 3 728 24 32 0 0 chr3L 18760844 18760875 -5782682 + AT_rich Low_complexity Low_complexity 1 31 0 3 728 21 57 0 0 chr3L 18761634 18761669 -5781888 + AT_rich Low_complexity Low_complexity 1 35 0 3 728 201 328 0 0 chr3L 18762245 18762306 -5781251 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 3 728 256 138 15 15 chr3L 18763027 18763093 -5780464 + (ACTG)n Simple_repeat Simple_repeat 3 68 0 3 728 28 0 0 0 chr3L 18763928 18763956 -5779601 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 222 213 0 0 chr3L 18764831 18764878 -5778679 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 728 197 146 21 0 chr3L 18765218 18765266 -5778291 + (TATG)n Simple_repeat Simple_repeat 4 52 0 3 728 3931 0 0 0 chr3L 18765563 18765991 -5777566 - ROO_LTR LTR Pao 0 428 1 3 728 7185 0 1 0 chr3L 18765991 18766811 -5776746 - ROO_I LTR Pao 0 8256 7436 3 728 60931 0 16 3 chr3L 18766806 18773758 -5769799 - ROO_I LTR Pao -1220 7036 1 3 728 3917 2 0 0 chr3L 18773758 18774186 -5769371 - ROO_LTR LTR Pao 0 428 1 3 728 181 221 14 14 chr3L 18774821 18774890 -5768667 + (CAA)n Simple_repeat Simple_repeat 1 69 0 3 728 212 154 0 19 chr3L 18774993 18775046 -5768511 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 728 208 274 0 0 chr3L 18775083 18775134 -5768423 + (CCG)n Simple_repeat Simple_repeat 3 53 0 3 728 24 32 0 0 chr3L 18775761 18775792 -5767765 + AT_rich Low_complexity Low_complexity 1 31 0 3 728 240 35 0 0 chr3L 18775881 18775910 -5767647 + (T)n Simple_repeat Simple_repeat 1 29 0 3 728 437 0 0 19 chr3L 18777527 18777581 -5765976 + (TAA)n Simple_repeat Simple_repeat 2 54 0 3 728 304 233 44 0 chr3L 18777848 18777938 -5765619 + DNAREP1_DM LINE Penelope 501 594 0 3 728 26 30 0 0 chr3L 18780602 18780635 -5762922 + AT_rich Low_complexity Low_complexity 1 33 0 3 728 356 153 0 12 chr3L 18781048 18781134 -5762423 + GA-rich Low_complexity Low_complexity 2 86 0 3 728 31 58 0 0 chr3L 18782472 18782524 -5761033 + AT_rich Low_complexity Low_complexity 1 52 0 3 728 21 0 0 0 chr3L 18783098 18783119 -5760438 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 38 81 0 0 chr3L 18783429 18783516 -5760041 + AT_rich Low_complexity Low_complexity 1 87 0 3 728 21 36 0 0 chr3L 18783901 18783929 -5759628 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 230 56 28 0 chr3L 18786078 18786114 -5757443 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 728 195 129 0 0 chr3L 18786443 18786474 -5757083 + (CAA)n Simple_repeat Simple_repeat 2 32 0 3 728 185 35 0 65 chr3L 18787291 18787322 -5756235 + (TTTAG)n Simple_repeat Simple_repeat 3 31 0 3 728 28 79 0 0 chr3L 18787667 18787730 -5755827 + AT_rich Low_complexity Low_complexity 1 63 0 3 728 28 99 0 0 chr3L 18790287 18790378 -5753179 + AT_rich Low_complexity Low_complexity 1 91 0 3 728 216 0 0 0 chr3L 18790734 18790758 -5752799 + (CTG)n Simple_repeat Simple_repeat 3 26 0 3 728 235 214 0 0 chr3L 18790928 18790984 -5752573 + (CCCGAA)n Simple_repeat Simple_repeat 3 58 0 3 728 276 130 0 0 chr3L 18791324 18791370 -5752187 + (TTG)n Simple_repeat Simple_repeat 1 46 0 3 728 270 272 0 12 chr3L 18791537 18791619 -5751938 + (CTG)n Simple_repeat Simple_repeat 3 83 0 3 728 210 176 0 0 chr3L 18791697 18791748 -5751809 + (CTG)n Simple_repeat Simple_repeat 3 53 0 3 728 21 57 0 0 chr3L 18791829 18791864 -5751693 + AT_rich Low_complexity Low_complexity 1 35 0 3 728 27 96 0 0 chr3L 18792440 18792523 -5751034 + AT_rich Low_complexity Low_complexity 1 83 0 3 728 23 33 0 0 chr3L 18792804 18792834 -5750723 + AT_rich Low_complexity Low_complexity 1 30 0 3 728 23 33 0 0 chr3L 18792932 18792962 -5750595 + AT_rich Low_complexity Low_complexity 1 30 0 3 728 223 250 12 12 chr3L 18793411 18793492 -5750065 + (TCTCTG)n Simple_repeat Simple_repeat 6 86 0 3 728 207 211 0 0 chr3L 18793572 18793610 -5749947 + (TTG)n Simple_repeat Simple_repeat 2 39 0 3 728 188 100 0 24 chr3L 18793721 18793762 -5749795 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 3 728 22 80 0 0 chr3L 18795245 18795295 -5748262 + AT_rich Low_complexity Low_complexity 1 50 0 3 728 22 35 0 0 chr3L 18795310 18795339 -5748218 + AT_rich Low_complexity Low_complexity 1 29 0 3 728 248 185 0 36 chr3L 18798726 18798810 -5744747 + CT-rich Low_complexity Low_complexity 2 82 0 3 728 221 113 0 54 chr3L 18802297 18802353 -5741204 + (CTG)n Simple_repeat Simple_repeat 1 53 0 3 728 195 42 0 0 chr3L 18805430 18805454 -5738103 + (CATA)n Simple_repeat Simple_repeat 1 24 0 3 728 214 0 53 53 chr3L 18806650 18806688 -5736869 + (TATAA)n Simple_repeat Simple_repeat 1 38 0 3 728 207 0 0 0 chr3L 18810495 18810518 -5733039 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 728 204 40 0 0 chr3L 18812730 18812755 -5730802 + (TTG)n Simple_repeat Simple_repeat 2 26 0 3 728 195 150 16 32 chr3L 18813431 18813493 -5730064 + (TTG)n Simple_repeat Simple_repeat 1 61 0 3 728 212 179 0 0 chr3L 18816341 18816380 -5727177 + T-rich Low_complexity Low_complexity 1 39 0 3 728 189 94 0 0 chr3L 18821073 18821105 -5722452 + (CCA)n Simple_repeat Simple_repeat 2 33 0 3 728 23 0 0 0 chr3L 18821745 18821768 -5721789 + AT_rich Low_complexity Low_complexity 1 23 0 3 728 43 20 0 0 chr3L 18823317 18823367 -5720190 + AT_rich Low_complexity Low_complexity 1 50 0 3 728 21 36 0 0 chr3L 18824364 18824392 -5719165 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 8993 16 4 3 chr3L 18826936 18828040 -5715517 - PROTOP_A DNA P 0 1105 1 3 728 21 0 0 0 chr3L 18829495 18829516 -5714041 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 36 0 0 0 chr3L 18830614 18830650 -5712907 + AT_rich Low_complexity Low_complexity 1 36 0 3 728 22 56 0 0 chr3L 18832815 18832851 -5710706 + AT_rich Low_complexity Low_complexity 1 36 0 3 728 21 0 0 0 chr3L 18836432 18836453 -5707104 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 21 36 0 0 chr3L 18839272 18839300 -5704257 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 240 59 0 0 chr3L 18839408 18839442 -5704115 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 728 30 0 0 0 chr3L 18839674 18839704 -5703853 + AT_rich Low_complexity Low_complexity 1 30 0 3 728 926 58 124 0 chr3L 18840952 18841089 -5702468 + DNAREP1_DM LINE Penelope 412 565 -29 3 728 28 0 0 0 chr3L 18841492 18841520 -5702037 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 21 0 0 0 chr3L 18841771 18841792 -5701765 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 400 249 184 26 chr3L 18841792 18842097 -5701460 + DNAREP1_DM LINE Penelope 40 392 -202 3 728 25 0 0 0 chr3L 18842135 18842160 -5701397 + AT_rich Low_complexity Low_complexity 1 25 0 3 728 23 0 0 0 chr3L 18844470 18844493 -5699064 + AT_rich Low_complexity Low_complexity 1 23 0 3 728 42 0 0 0 chr3L 18844756 18844798 -5698759 + AT_rich Low_complexity Low_complexity 1 42 0 3 728 309 68 0 0 chr3L 18845407 18845451 -5698106 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 728 21 0 0 0 chr3L 18845948 18845969 -5697588 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 21 36 0 0 chr3L 18846163 18846191 -5697366 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 208 146 17 68 chr3L 18846412 18846471 -5697086 + A-rich Low_complexity Low_complexity 5 60 0 3 728 25 0 0 0 chr3L 18847270 18847295 -5696262 + AT_rich Low_complexity Low_complexity 1 25 0 3 728 32 43 0 0 chr3L 18847353 18847399 -5696158 + AT_rich Low_complexity Low_complexity 1 46 0 3 728 198 0 0 0 chr3L 18847615 18847637 -5695920 + (CAGAA)n Simple_repeat Simple_repeat 4 25 0 3 728 227 210 19 48 chr3L 18848903 18849008 -5694549 + A-rich Low_complexity Low_complexity 2 103 0 3 728 25 51 0 0 chr3L 18851550 18851589 -5691968 + AT_rich Low_complexity Low_complexity 1 39 0 3 728 24 91 0 0 chr3L 18854203 18854269 -5689288 + AT_rich Low_complexity Low_complexity 1 66 0 3 728 25 65 0 0 chr3L 18854290 18854336 -5689221 + AT_rich Low_complexity Low_complexity 1 46 0 3 728 28 48 0 0 chr3L 18854474 18854516 -5689041 + AT_rich Low_complexity Low_complexity 1 42 0 3 728 23 33 0 0 chr3L 18856928 18856958 -5686599 + AT_rich Low_complexity Low_complexity 1 30 0 3 728 30 0 0 0 chr3L 18860690 18860720 -5682837 + AT_rich Low_complexity Low_complexity 1 30 0 3 728 23 54 0 0 chr3L 18865735 18865772 -5677785 + AT_rich Low_complexity Low_complexity 1 37 0 3 728 22 0 0 0 chr3L 18865802 18865824 -5677733 + AT_rich Low_complexity Low_complexity 1 22 0 3 729 26 0 0 0 chr3L 18874552 18874578 -5668979 + AT_rich Low_complexity Low_complexity 1 26 0 3 729 26 0 0 0 chr3L 18876799 18876825 -5666732 + AT_rich Low_complexity Low_complexity 1 26 0 3 729 22 56 0 0 chr3L 18877171 18877207 -5666350 + AT_rich Low_complexity Low_complexity 1 36 0 3 729 37 39 0 0 chr3L 18878487 18878538 -5665019 + AT_rich Low_complexity Low_complexity 1 51 0 3 729 27 0 0 0 chr3L 18884457 18884484 -5659073 + AT_rich Low_complexity Low_complexity 1 27 0 3 729 25 65 0 0 chr3L 18886211 18886257 -5657300 + AT_rich Low_complexity Low_complexity 1 46 0 3 729 22 70 0 0 chr3L 18887388 18887431 -5656126 + AT_rich Low_complexity Low_complexity 1 43 0 3 729 26 0 0 0 chr3L 18888033 18888059 -5655498 + AT_rich Low_complexity Low_complexity 1 26 0 3 729 23 33 0 0 chr3L 18888972 18889002 -5654555 + AT_rich Low_complexity Low_complexity 1 30 0 3 729 32 26 0 0 chr3L 18889911 18889950 -5653607 + AT_rich Low_complexity Low_complexity 1 39 0 3 729 40 49 0 0 chr3L 18890134 18890195 -5653362 + AT_rich Low_complexity Low_complexity 1 61 0 3 729 32 26 0 0 chr3L 18890355 18890394 -5653163 + AT_rich Low_complexity Low_complexity 1 39 0 3 729 25 0 0 0 chr3L 18891779 18891804 -5651753 + AT_rich Low_complexity Low_complexity 1 25 0 3 729 23 33 0 0 chr3L 18896058 18896088 -5647469 + AT_rich Low_complexity Low_complexity 1 30 0 3 729 23 33 0 0 chr3L 18898435 18898465 -5645092 + AT_rich Low_complexity Low_complexity 1 30 0 3 729 22 70 0 0 chr3L 18902029 18902072 -5641485 + AT_rich Low_complexity Low_complexity 1 43 0 3 729 29 60 0 0 chr3L 18904884 18904934 -5638623 + AT_rich Low_complexity Low_complexity 1 50 0 3 729 35 71 0 0 chr3L 18905840 18905910 -5637647 + AT_rich Low_complexity Low_complexity 1 70 0 3 729 29 60 0 0 chr3L 18908275 18908325 -5635232 + AT_rich Low_complexity Low_complexity 1 50 0 3 729 286 225 180 0 chr3L 18910963 18911074 -5632483 - DNAREP1_DM LINE Penelope -100 494 364 3 729 29 28 0 0 chr3L 18914976 18915012 -5628545 + AT_rich Low_complexity Low_complexity 1 36 0 3 729 180 0 0 0 chr3L 18916517 18916537 -5627020 + (GA)n Simple_repeat Simple_repeat 2 21 0 3 729 195 129 0 0 chr3L 18917313 18917344 -5626213 + (TCG)n Simple_repeat Simple_repeat 3 33 0 3 729 26 30 0 0 chr3L 18917723 18917756 -5625801 + AT_rich Low_complexity Low_complexity 1 33 0 3 729 23 54 0 0 chr3L 18920536 18920573 -5622984 + AT_rich Low_complexity Low_complexity 1 37 0 3 729 213 64 62 21 chr3L 18924195 18924243 -5619314 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 3 729 236 132 0 0 chr3L 18925272 18925310 -5618247 - DNAREP1_DM LINE Penelope -536 58 21 3 729 213 39 0 0 chr3L 18925691 18925717 -5617840 + (CTA)n Simple_repeat Simple_repeat 2 27 0 3 729 307 216 50 20 chr3L 18926498 18926597 -5616960 - DNAREP1_DM LINE Penelope -453 141 40 3 729 21 0 0 0 chr3L 18927296 18927317 -5616240 + AT_rich Low_complexity Low_complexity 1 21 0 3 729 25 0 0 0 chr3L 18928815 18928840 -5614717 + AT_rich Low_complexity Low_complexity 1 25 0 3 729 22 0 0 0 chr3L 18931966 18931988 -5611569 + AT_rich Low_complexity Low_complexity 1 22 0 3 729 180 0 0 0 chr3L 18933056 18933076 -5610481 + (A)n Simple_repeat Simple_repeat 1 20 0 3 729 246 105 0 0 chr3L 18933542 18933580 -5609977 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 729 25 31 0 0 chr3L 18937566 18937598 -5605959 + AT_rich Low_complexity Low_complexity 1 32 0 3 729 180 125 0 0 chr3L 18940272 18940304 -5603253 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 729 47 67 0 0 chr3L 18941873 18941962 -5601595 + AT_rich Low_complexity Low_complexity 1 89 0 3 729 23 54 0 0 chr3L 18943043 18943080 -5600477 + AT_rich Low_complexity Low_complexity 1 37 0 3 729 21 57 0 0 chr3L 18944958 18944993 -5598564 + AT_rich Low_complexity Low_complexity 1 35 0 3 729 23 0 0 0 chr3L 18946267 18946290 -5597267 + AT_rich Low_complexity Low_complexity 1 23 0 3 729 30 59 0 0 chr3L 18946991 18947042 -5596515 + AT_rich Low_complexity Low_complexity 1 51 0 3 729 25 0 0 0 chr3L 18949517 18949542 -5594015 + AT_rich Low_complexity Low_complexity 1 25 0 3 729 21 82 0 0 chr3L 18952718 18952767 -5590790 + AT_rich Low_complexity Low_complexity 1 49 0 3 729 28 0 0 0 chr3L 18955215 18955243 -5588314 + AT_rich Low_complexity Low_complexity 1 28 0 3 729 22 56 0 0 chr3L 18955933 18955969 -5587588 + AT_rich Low_complexity Low_complexity 1 36 0 3 729 27 49 0 0 chr3L 18956057 18956098 -5587459 + AT_rich Low_complexity Low_complexity 1 41 0 3 729 210 246 0 55 chr3L 18956744 18956817 -5586740 + (TTTG)n Simple_repeat Simple_repeat 1 69 0 3 729 24 0 0 0 chr3L 18962123 18962147 -5581410 + AT_rich Low_complexity Low_complexity 1 24 0 3 729 27 62 0 0 chr3L 18964440 18964488 -5579069 + AT_rich Low_complexity Low_complexity 1 48 0 3 729 207 88 0 0 chr3L 18978599 18978633 -5564924 + (ATTG)n Simple_repeat Simple_repeat 1 34 0 3 729 22 0 0 0 chr3L 18982421 18982443 -5561114 + AT_rich Low_complexity Low_complexity 1 22 0 3 729 23 0 0 0 chr3L 18986434 18986457 -5557100 + AT_rich Low_complexity Low_complexity 1 23 0 3 729 22 35 0 0 chr3L 18986697 18986726 -5556831 + AT_rich Low_complexity Low_complexity 1 29 0 3 729 26 0 0 0 chr3L 18994521 18994547 -5549010 + AT_rich Low_complexity Low_complexity 1 26 0 3 729 412 174 19 39 chr3L 18994847 18994951 -5548606 - PENELOPE LINE Penelope -111 4050 3964 3 729 376 219 50 58 chr3L 18994947 18995068 -5548489 + DNAREP1_DM LINE Penelope 351 470 -124 3 729 189 0 0 0 chr3L 18997539 18997560 -5545997 + (TATG)n Simple_repeat Simple_repeat 2 22 0 3 729 260 256 0 0 chr3L 18998402 18998480 -5545077 + (CTG)n Simple_repeat Simple_repeat 2 79 0 3 729 215 103 26 0 chr3L 18998525 18998564 -5544993 + (CTG)n Simple_repeat Simple_repeat 2 41 0 3 729 180 77 0 0 chr3L 18999023 18999049 -5544508 + (TTG)n Simple_repeat Simple_repeat 3 28 0 3 729 222 136 0 0 chr3L 18999748 18999792 -5543765 + (CTG)n Simple_repeat Simple_repeat 3 46 0 3 729 28 0 0 0 chr3L 19000071 19000099 -5543458 + AT_rich Low_complexity Low_complexity 1 28 0 3 729 2183 0 0 26 chr3L 19001999 19002268 -5541289 + LINEJ1_DM LINE Jockey 4759 5020 0 3 730 24 32 0 0 chr3L 19008501 19008532 -5535025 + AT_rich Low_complexity Low_complexity 1 31 0 3 730 21 0 0 0 chr3L 19008670 19008691 -5534866 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 180 167 0 0 chr3L 19008828 19008876 -5534681 + T-rich Low_complexity Low_complexity 1 48 0 3 730 270 95 0 0 chr3L 19010099 19010141 -5533416 + (TTG)n Simple_repeat Simple_repeat 1 42 0 3 730 291 28 0 0 chr3L 19012735 19012771 -5530786 + (TCC)n Simple_repeat Simple_repeat 1 36 0 3 730 26 82 0 0 chr3L 19013280 19013341 -5530216 + AT_rich Low_complexity Low_complexity 1 61 0 3 730 218 297 0 0 chr3L 19017345 19017409 -5526148 + A-rich Low_complexity Low_complexity 1 64 0 3 730 225 0 0 0 chr3L 19019951 19019976 -5523581 + (C)n Simple_repeat Simple_repeat 1 25 0 3 730 204 67 0 0 chr3L 19020001 19020031 -5523526 + (T)n Simple_repeat Simple_repeat 1 30 0 3 730 224 261 14 0 chr3L 19023393 19023462 -5520095 + (TCCG)n Simple_repeat Simple_repeat 4 73 0 3 730 25 0 0 0 chr3L 19025495 19025520 -5518037 + AT_rich Low_complexity Low_complexity 1 25 0 3 730 189 0 0 0 chr3L 19026093 19026114 -5517443 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 730 34 42 0 0 chr3L 19026358 19026406 -5517151 + AT_rich Low_complexity Low_complexity 1 48 0 3 730 231 210 0 16 chr3L 19028444 19028507 -5515050 + C-rich Low_complexity Low_complexity 5 66 0 3 730 195 42 0 0 chr3L 19031797 19031821 -5511736 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 730 192 77 0 0 chr3L 19031827 19031853 -5511704 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 730 195 42 0 0 chr3L 19033205 19033229 -5510328 + (CCGAA)n Simple_repeat Simple_repeat 4 27 0 3 730 279 54 0 0 chr3L 19034163 19034200 -5509357 + (TTCGG)n Simple_repeat Simple_repeat 4 40 0 3 730 201 211 0 0 chr3L 19035257 19035314 -5508243 + (TCCG)n Simple_repeat Simple_repeat 3 59 0 3 730 40 21 0 0 chr3L 19038794 19038841 -5504716 + AT_rich Low_complexity Low_complexity 1 47 0 3 730 22 56 0 0 chr3L 19040783 19040819 -5502738 + AT_rich Low_complexity Low_complexity 1 36 0 3 730 21 0 0 0 chr3L 19042855 19042876 -5500681 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 21 0 0 0 chr3L 19045989 19046010 -5497547 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 47 19 0 0 chr3L 19047035 19047089 -5496468 + AT_rich Low_complexity Low_complexity 1 54 0 3 730 23 33 0 0 chr3L 19047764 19047794 -5495763 + AT_rich Low_complexity Low_complexity 1 30 0 3 730 204 97 0 0 chr3L 19048152 19048183 -5495374 + (TCC)n Simple_repeat Simple_repeat 3 33 0 3 730 25 51 0 0 chr3L 19050096 19050135 -5493422 + AT_rich Low_complexity Low_complexity 1 39 0 3 730 237 132 0 0 chr3L 19051081 19051119 -5492438 + (CGGA)n Simple_repeat Simple_repeat 4 41 0 3 730 216 0 0 0 chr3L 19052025 19052049 -5491508 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 730 22 70 0 0 chr3L 19052611 19052654 -5490903 + AT_rich Low_complexity Low_complexity 1 43 0 3 730 31 0 0 0 chr3L 19061462 19061493 -5482064 + AT_rich Low_complexity Low_complexity 1 31 0 3 730 200 189 0 0 chr3L 19062874 19062911 -5480646 + (TGG)n Simple_repeat Simple_repeat 3 39 0 3 730 27 49 0 0 chr3L 19064201 19064242 -5479315 + AT_rich Low_complexity Low_complexity 1 41 0 3 730 21 0 0 0 chr3L 19064542 19064563 -5478994 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 237 33 0 0 chr3L 19065339 19065369 -5478188 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 730 180 143 0 0 chr3L 19065514 19065556 -5478001 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 730 226 304 14 0 chr3L 19066567 19066636 -5476921 + (CATA)n Simple_repeat Simple_repeat 2 71 0 3 730 183 42 0 0 chr3L 19068745 19068769 -5474788 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 3 730 195 114 0 0 chr3L 19068939 19068974 -5474583 + (TAA)n Simple_repeat Simple_repeat 1 35 0 3 730 23 92 0 0 chr3L 19071738 19071803 -5471754 + AT_rich Low_complexity Low_complexity 1 65 0 3 730 34 55 0 0 chr3L 19079966 19080021 -5463536 + AT_rich Low_complexity Low_complexity 1 55 0 3 730 33 56 0 0 chr3L 19081154 19081208 -5462349 + AT_rich Low_complexity Low_complexity 1 54 0 3 730 22 35 0 0 chr3L 19082585 19082614 -5460943 + AT_rich Low_complexity Low_complexity 1 29 0 3 730 24 0 0 0 chr3L 19083432 19083456 -5460101 + AT_rich Low_complexity Low_complexity 1 24 0 3 730 250 211 0 17 chr3L 19084829 19084887 -5458670 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 730 41 48 0 0 chr3L 19085440 19085502 -5458055 + AT_rich Low_complexity Low_complexity 1 62 0 3 730 211 303 0 0 chr3L 19086074 19086150 -5457407 + GA-rich Low_complexity Low_complexity 2 77 0 3 730 22 70 0 0 chr3L 19086451 19086494 -5457063 + AT_rich Low_complexity Low_complexity 1 43 0 3 730 21 0 0 0 chr3L 19087808 19087829 -5455728 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 28 48 0 0 chr3L 19089430 19089472 -5454085 + AT_rich Low_complexity Low_complexity 1 42 0 3 730 31 58 0 0 chr3L 19098028 19098080 -5445477 + AT_rich Low_complexity Low_complexity 1 52 0 3 730 354 257 19 19 chr3L 19099110 19099265 -5444292 + (TA)n Simple_repeat Simple_repeat 2 156 0 3 730 23 0 0 0 chr3L 19099478 19099501 -5444056 + AT_rich Low_complexity Low_complexity 1 23 0 3 730 34 42 0 0 chr3L 19099874 19099922 -5443635 + AT_rich Low_complexity Low_complexity 1 48 0 3 730 26 30 0 0 chr3L 19101803 19101836 -5441721 + AT_rich Low_complexity Low_complexity 1 33 0 3 730 281 76 0 81 chr3L 19102429 19102515 -5441042 + (CAAAC)n Simple_repeat Simple_repeat 2 80 0 3 730 251 93 0 23 chr3L 19102556 19102600 -5440957 + (TGG)n Simple_repeat Simple_repeat 2 44 0 3 730 188 35 35 0 chr3L 19103916 19103945 -5439612 + (TAA)n Simple_repeat Simple_repeat 2 31 0 3 730 22 0 0 0 chr3L 19105441 19105463 -5438094 + AT_rich Low_complexity Low_complexity 1 22 0 3 730 915 9 0 0 chr3L 19108802 19108912 -5434645 - BS LINE Jockey 0 5126 5017 3 730 3120 25 0 0 chr3L 19110197 19110553 -5433004 - MDG1_LTR LTR Gypsy 0 442 87 3 730 423 100 0 0 chr3L 19110553 19110623 -5432934 + (TTA)n Simple_repeat Simple_repeat 3 72 0 3 730 57359 6 16 2 chr3L 19110627 19117145 -5426412 - MDG1_I LTR Gypsy -98 6799 1 3 730 3120 25 0 0 chr3L 19117145 19117501 -5426056 - MDG1_LTR LTR Gypsy 0 442 87 3 730 423 100 0 0 chr3L 19117501 19117571 -5425986 + (TTA)n Simple_repeat Simple_repeat 3 72 0 3 730 27 0 0 0 chr3L 19119270 19119297 -5424260 + AT_rich Low_complexity Low_complexity 1 27 0 3 730 21 0 0 0 chr3L 19120262 19120283 -5423274 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 21 0 0 0 chr3L 19122990 19123011 -5420546 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 21 0 0 0 chr3L 19123224 19123245 -5420312 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 21 0 0 0 chr3L 19123301 19123322 -5420235 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 27 0 0 0 chr3L 19123831 19123858 -5419699 + AT_rich Low_complexity Low_complexity 1 27 0 3 730 21 0 0 0 chr3L 19125724 19125745 -5417812 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 24 53 0 0 chr3L 19131129 19131167 -5412390 + AT_rich Low_complexity Low_complexity 1 38 0 3 730 206 179 18 0 chr3L 19132060 19132116 -5411441 + T-rich Low_complexity Low_complexity 3 59 0 3 730 21 0 0 0 chr3L 19134378 19134399 -5409158 + AT_rich Low_complexity Low_complexity 1 21 0 3 730 27 0 0 0 chr3L 19135317 19135344 -5408213 + AT_rich Low_complexity Low_complexity 1 27 0 3 730 24 0 0 0 chr3L 19135414 19135438 -5408119 + AT_rich Low_complexity Low_complexity 1 24 0 3 731 216 308 0 32 chr3L 19138712 19138836 -5404721 + (CCG)n Simple_repeat Simple_repeat 1 120 0 3 731 222 150 0 0 chr3L 19146933 19146973 -5396584 + (CATA)n Simple_repeat Simple_repeat 4 43 0 3 731 205 195 0 0 chr3L 19147143 19147184 -5396373 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 731 180 0 0 0 chr3L 19150802 19150822 -5392735 + (T)n Simple_repeat Simple_repeat 1 20 0 3 731 21 36 0 0 chr3L 19156216 19156244 -5387313 + AT_rich Low_complexity Low_complexity 1 28 0 3 731 183 42 0 0 chr3L 19156993 19157017 -5386540 + (CAACT)n Simple_repeat Simple_repeat 3 26 0 3 731 192 77 0 0 chr3L 19158909 19158935 -5384622 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 3 731 200 118 29 0 chr3L 19159497 19159531 -5384026 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 3 731 207 208 0 20 chr3L 19160643 19160692 -5382865 + (ACTG)n Simple_repeat Simple_repeat 1 48 0 3 731 43 35 0 0 chr3L 19161187 19161244 -5382313 + AT_rich Low_complexity Low_complexity 1 57 0 3 731 186 133 0 0 chr3L 19167560 19167590 -5375967 + (CGGA)n Simple_repeat Simple_repeat 4 33 0 3 731 206 176 20 0 chr3L 19168137 19168188 -5375369 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 731 203 162 27 0 chr3L 19170348 19170385 -5373172 + (CGAAG)n Simple_repeat Simple_repeat 2 39 0 3 731 22 0 0 0 chr3L 19171909 19171931 -5371626 + AT_rich Low_complexity Low_complexity 1 22 0 3 731 25 0 0 0 chr3L 19172789 19172814 -5370743 + AT_rich Low_complexity Low_complexity 1 25 0 3 731 324 70 0 0 chr3L 19174189 19174232 -5369325 + (CAGTT)n Simple_repeat Simple_repeat 4 46 0 3 731 225 0 0 0 chr3L 19177335 19177360 -5366197 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 731 24 0 0 0 chr3L 19180815 19180839 -5362718 + AT_rich Low_complexity Low_complexity 1 24 0 3 731 30 45 0 0 chr3L 19182077 19182121 -5361436 + AT_rich Low_complexity Low_complexity 1 44 0 3 731 37 39 0 0 chr3L 19182914 19182965 -5360592 + AT_rich Low_complexity Low_complexity 1 51 0 3 731 22 0 0 0 chr3L 19182992 19183014 -5360543 + AT_rich Low_complexity Low_complexity 1 22 0 3 731 27 0 0 0 chr3L 19187376 19187403 -5356154 + AT_rich Low_complexity Low_complexity 1 27 0 3 731 24 0 0 0 chr3L 19187409 19187433 -5356124 + AT_rich Low_complexity Low_complexity 1 24 0 3 731 21 0 0 0 chr3L 19190604 19190625 -5352932 + AT_rich Low_complexity Low_complexity 1 21 0 3 731 189 171 0 0 chr3L 19193535 19193570 -5349987 + CT-rich Low_complexity Low_complexity 3 37 0 3 731 30 69 0 0 chr3L 19194899 19194957 -5348600 + AT_rich Low_complexity Low_complexity 1 58 0 3 731 27 0 0 0 chr3L 19199990 19200017 -5343540 + AT_rich Low_complexity Low_complexity 1 27 0 3 731 247 177 0 46 chr3L 19200465 19200530 -5343027 + ROO_I LTR Pao 680 741 -7515 3 731 12166 1 0 0 chr3L 19201213 19202529 -5341028 - DOC LINE Jockey 0 4725 3410 3 731 21 0 0 0 chr3L 19203051 19203072 -5340485 + AT_rich Low_complexity Low_complexity 1 21 0 3 731 27 0 0 0 chr3L 19205165 19205192 -5338365 + AT_rich Low_complexity Low_complexity 1 27 0 3 731 213 314 0 0 chr3L 19207577 19207647 -5335910 + (TCTG)n Simple_repeat Simple_repeat 1 70 0 3 731 198 0 0 0 chr3L 19208396 19208418 -5335139 + (CAGTT)n Simple_repeat Simple_repeat 3 24 0 3 731 222 208 0 0 chr3L 19212366 19212419 -5331138 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 731 315 0 0 0 chr3L 19212892 19212927 -5330630 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 3 731 204 40 0 0 chr3L 19213733 19213758 -5329799 + (GGAGA)n Simple_repeat Simple_repeat 4 28 0 3 731 276 53 0 0 chr3L 19214747 19214785 -5328772 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 731 26 30 0 0 chr3L 19216538 19216571 -5326986 + AT_rich Low_complexity Low_complexity 1 33 0 3 731 40 83 0 0 chr3L 19216638 19216734 -5326823 + AT_rich Low_complexity Low_complexity 1 96 0 3 731 205 186 0 0 chr3L 19217746 19217789 -5325768 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 3 731 214 182 0 0 chr3L 19218048 19218092 -5325465 + T-rich Low_complexity Low_complexity 1 44 0 3 731 21 71 0 0 chr3L 19218373 19218415 -5325142 + AT_rich Low_complexity Low_complexity 1 42 0 3 731 219 236 0 0 chr3L 19221737 19221792 -5321765 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 731 210 171 0 24 chr3L 19221930 19221972 -5321585 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 3 731 180 0 0 0 chr3L 19224199 19224219 -5319338 + (GAATG)n Simple_repeat Simple_repeat 3 22 0 3 731 203 162 0 0 chr3L 19228098 19228135 -5315422 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 731 21 0 0 0 chr3L 19228896 19228917 -5314640 + AT_rich Low_complexity Low_complexity 1 21 0 3 731 227 29 57 0 chr3L 19229204 19229239 -5314318 + (TATAA)n Simple_repeat Simple_repeat 1 37 0 3 731 316 203 0 0 chr3L 19230497 19230556 -5313001 + DNAREP1_DM LINE Penelope 438 496 -98 3 731 27 0 0 0 chr3L 19231953 19231980 -5311577 + AT_rich Low_complexity Low_complexity 1 27 0 3 731 211 262 0 0 chr3L 19233042 19233103 -5310454 + (CTCA)n Simple_repeat Simple_repeat 2 62 0 3 731 26 0 0 0 chr3L 19233158 19233184 -5310373 + AT_rich Low_complexity Low_complexity 1 26 0 3 731 39 22 0 0 chr3L 19234331 19234377 -5309180 + AT_rich Low_complexity Low_complexity 1 46 0 3 731 199 146 0 35 chr3L 19239118 19239175 -5304382 + (TTGGGG)n Simple_repeat Simple_repeat 5 59 0 3 731 317 145 0 16 chr3L 19239431 19239494 -5304063 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 731 27 49 0 0 chr3L 19245903 19245944 -5297613 + AT_rich Low_complexity Low_complexity 1 41 0 3 731 180 0 0 0 chr3L 19250799 19250819 -5292738 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 731 33 87 0 23 chr3L 19254024 19254153 -5289404 + AT_rich Low_complexity Low_complexity 1 126 0 3 731 22 0 0 0 chr3L 19254272 19254294 -5289263 + AT_rich Low_complexity Low_complexity 1 22 0 3 731 22 70 0 0 chr3L 19254359 19254402 -5289155 + AT_rich Low_complexity Low_complexity 1 43 0 3 731 24 0 0 0 chr3L 19254765 19254789 -5288768 + AT_rich Low_complexity Low_complexity 1 24 0 3 731 29 60 0 0 chr3L 19257335 19257385 -5286172 + AT_rich Low_complexity Low_complexity 1 50 0 3 731 353 174 84 32 chr3L 19258563 19258658 -5284899 - DNAREP1_DM LINE Penelope 0 594 495 3 731 384 222 46 46 chr3L 19258688 19258839 -5284718 - DNAREP1_DM LINE Penelope -443 151 1 3 731 25 0 0 0 chr3L 19259518 19259543 -5284014 + AT_rich Low_complexity Low_complexity 1 25 0 3 731 23 54 0 0 chr3L 19261564 19261601 -5281956 + AT_rich Low_complexity Low_complexity 1 37 0 3 731 22 35 0 0 chr3L 19261662 19261691 -5281866 + AT_rich Low_complexity Low_complexity 1 29 0 3 731 31 26 0 0 chr3L 19263855 19263893 -5279664 + AT_rich Low_complexity Low_complexity 1 38 0 3 731 248 220 0 0 chr3L 19264049 19264099 -5279458 + DNAREP1_DM LINE Penelope 10 59 -535 3 732 32 0 0 0 chr3L 19268987 19269019 -5274538 + AT_rich Low_complexity Low_complexity 1 32 0 3 732 234 0 0 0 chr3L 19269082 19269108 -5274449 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 732 21 0 0 0 chr3L 19269456 19269477 -5274080 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 209 196 0 0 chr3L 19272362 19272408 -5271149 + (CTATA)n Simple_repeat Simple_repeat 5 50 0 3 732 29 28 0 0 chr3L 19275024 19275060 -5268497 + AT_rich Low_complexity Low_complexity 1 36 0 3 732 24 0 0 0 chr3L 19278995 19279019 -5264538 + AT_rich Low_complexity Low_complexity 1 24 0 3 732 206 135 0 26 chr3L 19281299 19281337 -5262220 + (TGGG)n Simple_repeat Simple_repeat 2 38 0 3 732 252 77 0 0 chr3L 19281740 19281779 -5261778 + (GGATG)n Simple_repeat Simple_repeat 2 40 0 3 732 24 67 0 0 chr3L 19282931 19282976 -5260581 + AT_rich Low_complexity Low_complexity 1 45 0 3 732 24 0 0 0 chr3L 19283381 19283405 -5260152 + AT_rich Low_complexity Low_complexity 1 24 0 3 732 23 33 0 0 chr3L 19284083 19284113 -5259444 + AT_rich Low_complexity Low_complexity 1 30 0 3 732 31 44 0 0 chr3L 19285842 19285887 -5257670 + AT_rich Low_complexity Low_complexity 1 45 0 3 732 25 0 0 0 chr3L 19286924 19286949 -5256608 + AT_rich Low_complexity Low_complexity 1 25 0 3 732 592 280 70 53 chr3L 19287051 19287353 -5256204 + DNAREP1_DM LINE Penelope 177 483 -111 3 732 310 85 0 41 chr3L 19287355 19287404 -5256153 + DNAREP1_DM LINE Penelope 547 593 -1 3 732 227 204 0 0 chr3L 19288141 19288190 -5255367 + (CAA)n Simple_repeat Simple_repeat 1 49 0 3 732 26 30 0 0 chr3L 19288686 19288719 -5254838 + AT_rich Low_complexity Low_complexity 1 33 0 3 732 24 32 0 0 chr3L 19289170 19289201 -5254356 + AT_rich Low_complexity Low_complexity 1 31 0 3 732 204 365 0 0 chr3L 19289869 19289943 -5253614 + (CAG)n Simple_repeat Simple_repeat 2 75 0 3 732 207 0 0 0 chr3L 19309670 19309693 -5233864 + (CAT)n Simple_repeat Simple_repeat 1 23 0 3 732 33 43 0 0 chr3L 19310649 19310696 -5232861 + AT_rich Low_complexity Low_complexity 1 47 0 3 732 230 143 20 0 chr3L 19311747 19311796 -5231761 + (AGATG)n Simple_repeat Simple_repeat 1 50 0 3 732 21 36 0 0 chr3L 19312642 19312670 -5230887 + AT_rich Low_complexity Low_complexity 1 28 0 3 732 35 0 0 0 chr3L 19312679 19312714 -5230843 + AT_rich Low_complexity Low_complexity 1 35 0 3 732 23 0 0 0 chr3L 19317517 19317540 -5226017 + AT_rich Low_complexity Low_complexity 1 23 0 3 732 21 36 0 0 chr3L 19320333 19320361 -5223196 + AT_rich Low_complexity Low_complexity 1 28 0 3 732 183 80 0 0 chr3L 19321477 19321502 -5222055 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 732 24 0 0 0 chr3L 19324962 19324986 -5218571 + AT_rich Low_complexity Low_complexity 1 24 0 3 732 375 73 0 0 chr3L 19325021 19325076 -5218481 + (TTCGG)n Simple_repeat Simple_repeat 4 58 0 3 732 23 33 0 0 chr3L 19327369 19327399 -5216158 + AT_rich Low_complexity Low_complexity 1 30 0 3 732 22 56 0 0 chr3L 19327675 19327711 -5215846 + AT_rich Low_complexity Low_complexity 1 36 0 3 732 183 204 0 0 chr3L 19328644 19328688 -5214869 + (ACTG)n Simple_repeat Simple_repeat 4 47 0 3 732 22 35 0 0 chr3L 19329785 19329814 -5213743 + AT_rich Low_complexity Low_complexity 1 29 0 3 732 21 0 0 0 chr3L 19330123 19330144 -5213413 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 25 65 0 0 chr3L 19332434 19332480 -5211077 + AT_rich Low_complexity Low_complexity 1 46 0 3 732 21 0 0 0 chr3L 19338851 19338872 -5204685 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 29 47 0 0 chr3L 19340909 19340952 -5202605 + AT_rich Low_complexity Low_complexity 1 43 0 3 732 28 0 0 0 chr3L 19342851 19342879 -5200678 + AT_rich Low_complexity Low_complexity 1 28 0 3 732 207 0 0 0 chr3L 19344164 19344187 -5199370 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 3 732 23 54 0 0 chr3L 19346889 19346926 -5196631 + AT_rich Low_complexity Low_complexity 1 37 0 3 732 216 0 0 0 chr3L 19347332 19347356 -5196201 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 732 23 0 0 0 chr3L 19348182 19348205 -5195352 + AT_rich Low_complexity Low_complexity 1 23 0 3 732 184 97 0 75 chr3L 19348742 19348809 -5194748 + (CATATA)n Simple_repeat Simple_repeat 1 62 0 3 732 24 32 0 0 chr3L 19349000 19349031 -5194526 + AT_rich Low_complexity Low_complexity 1 31 0 3 732 24 0 0 0 chr3L 19352182 19352206 -5191351 + AT_rich Low_complexity Low_complexity 1 24 0 3 732 43 20 0 0 chr3L 19353418 19353468 -5190089 + AT_rich Low_complexity Low_complexity 1 50 0 3 732 279 0 0 0 chr3L 19355319 19355350 -5188207 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3 732 197 132 26 0 chr3L 19356172 19356210 -5187347 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 732 25 0 0 0 chr3L 19356974 19356999 -5186558 + AT_rich Low_complexity Low_complexity 1 25 0 3 732 213 53 0 109 chr3L 19359549 19359613 -5183944 + (TTGGGG)n Simple_repeat Simple_repeat 2 58 0 3 732 22 0 0 0 chr3L 19361432 19361454 -5182103 + AT_rich Low_complexity Low_complexity 1 22 0 3 732 261 0 0 0 chr3L 19363906 19363935 -5179622 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 732 47 19 0 0 chr3L 19367620 19367674 -5175883 + AT_rich Low_complexity Low_complexity 1 54 0 3 732 31 0 0 0 chr3L 19367948 19367979 -5175578 + AT_rich Low_complexity Low_complexity 1 31 0 3 732 222 37 0 0 chr3L 19368107 19368134 -5175423 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 732 23 0 0 0 chr3L 19368733 19368756 -5174801 + AT_rich Low_complexity Low_complexity 1 23 0 3 732 39 0 0 0 chr3L 19368935 19368974 -5174583 + AT_rich Low_complexity Low_complexity 1 39 0 3 732 36 40 0 0 chr3L 19369839 19369889 -5173668 + AT_rich Low_complexity Low_complexity 1 50 0 3 732 207 0 0 0 chr3L 19370314 19370337 -5173220 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 732 189 0 0 0 chr3L 19372353 19372374 -5171183 + (A)n Simple_repeat Simple_repeat 1 21 0 3 732 203 152 0 21 chr3L 19376822 19376869 -5166688 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 732 24 67 0 0 chr3L 19378364 19378409 -5165148 + AT_rich Low_complexity Low_complexity 1 45 0 3 732 195 69 0 0 chr3L 19380041 19380070 -5163487 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 732 21 0 0 0 chr3L 19380334 19380355 -5163202 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 271 163 0 0 chr3L 19383224 19383267 -5160290 + DNAREP1_DM LINE Penelope 25 67 -527 3 732 23 0 0 0 chr3L 19384671 19384694 -5158863 + AT_rich Low_complexity Low_complexity 1 23 0 3 732 25 51 0 0 chr3L 19384730 19384769 -5158788 + AT_rich Low_complexity Low_complexity 1 39 0 3 732 34 0 0 0 chr3L 19385692 19385726 -5157831 + AT_rich Low_complexity Low_complexity 1 34 0 3 732 26 0 0 0 chr3L 19386245 19386271 -5157286 + AT_rich Low_complexity Low_complexity 1 26 0 3 732 264 130 0 0 chr3L 19387643 19387689 -5155868 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 732 21 0 0 0 chr3L 19388993 19389014 -5154543 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 25 0 0 0 chr3L 19390641 19390666 -5152891 + GC_rich Low_complexity Low_complexity 1 25 0 3 732 31 0 0 0 chr3L 19391041 19391072 -5152485 + AT_rich Low_complexity Low_complexity 1 31 0 3 732 43238 1 0 0 chr3L 19392053 19396746 -5146811 - FW_DM LINE Jockey 0 4692 2 3 732 21 36 0 0 chr3L 19397364 19397392 -5146165 + AT_rich Low_complexity Low_complexity 1 28 0 3 733 189 107 0 0 chr3L 19400891 19400919 -5142638 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 3 733 198 0 0 0 chr3L 19402996 19403018 -5140539 + (AATTG)n Simple_repeat Simple_repeat 1 22 0 3 733 234 62 0 0 chr3L 19406266 19406298 -5137259 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 733 192 40 0 0 chr3L 19406584 19406609 -5136948 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 733 180 125 0 0 chr3L 19414903 19414935 -5128622 + (CTG)n Simple_repeat Simple_repeat 1 32 0 3 733 287 120 100 0 chr3L 19415439 19415489 -5128068 - DNAREP1_DM LINE Penelope -9 585 531 3 733 278 26 26 0 chr3L 19415489 19415528 -5128029 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 733 1009 79 158 0 chr3L 19415528 19415680 -5127877 - DNAREP1_DM LINE Penelope -113 481 306 3 733 632 153 0 0 chr3L 19418068 19418179 -5125378 - DNAREP1_DM LINE Penelope -315 279 169 3 733 596 89 0 0 chr3L 19418206 19418285 -5125272 - DNAREP1_DM LINE Penelope -514 80 2 3 733 205 162 0 0 chr3L 19419489 19419526 -5124031 + (CAGC)n Simple_repeat Simple_repeat 2 38 0 3 733 213 39 0 0 chr3L 19421851 19421877 -5121680 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 3 733 210 171 0 24 chr3L 19425506 19425548 -5118009 + GA-rich Low_complexity Low_complexity 1 41 0 3 733 22 35 0 0 chr3L 19426986 19427015 -5116542 + AT_rich Low_complexity Low_complexity 1 29 0 3 733 22 0 0 0 chr3L 19427091 19427113 -5116444 + AT_rich Low_complexity Low_complexity 1 22 0 3 733 30 0 0 0 chr3L 19430035 19430065 -5113492 + AT_rich Low_complexity Low_complexity 1 30 0 3 733 32 0 0 0 chr3L 19430905 19430937 -5112620 + AT_rich Low_complexity Low_complexity 1 32 0 3 733 23 0 0 0 chr3L 19431826 19431849 -5111708 + AT_rich Low_complexity Low_complexity 1 23 0 3 733 231 215 0 0 chr3L 19433423 19433488 -5110069 + (CAT)n Simple_repeat Simple_repeat 1 65 0 3 733 225 83 0 0 chr3L 19436035 19436071 -5107486 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 3 733 207 100 0 0 chr3L 19439238 19439268 -5104289 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 3 733 228 128 0 0 chr3L 19439815 19439854 -5103703 + PROTOP_A DNA P 507 545 -560 3 733 586 0 44 22 chr3L 19440052 19440143 -5103414 + (TAAA)n Simple_repeat Simple_repeat 2 94 0 3 733 21 36 0 0 chr3L 19444938 19444966 -5098591 + AT_rich Low_complexity Low_complexity 1 28 0 3 733 23 0 0 0 chr3L 19446375 19446398 -5097159 + AT_rich Low_complexity Low_complexity 1 23 0 3 733 44 20 0 0 chr3L 19450538 19450589 -5092968 + AT_rich Low_complexity Low_complexity 1 51 0 3 733 22 35 0 0 chr3L 19451771 19451800 -5091757 + AT_rich Low_complexity Low_complexity 1 29 0 3 733 192 40 0 0 chr3L 19454606 19454631 -5088926 + (CGATG)n Simple_repeat Simple_repeat 4 28 0 3 733 21 0 0 0 chr3L 19456736 19456757 -5086800 + AT_rich Low_complexity Low_complexity 1 21 0 3 733 30 27 0 0 chr3L 19456831 19456868 -5086689 + AT_rich Low_complexity Low_complexity 1 37 0 3 733 21 36 0 0 chr3L 19458566 19458594 -5084963 + AT_rich Low_complexity Low_complexity 1 28 0 3 733 310 190 317 16 chr3L 19458849 19458972 -5084585 + DNAREP1_DM LINE Penelope 433 592 -2 3 733 493 167 0 0 chr3L 19461310 19461394 -5082163 + DNAREP1_DM LINE Penelope 1 84 -510 3 733 1906 106 50 134 chr3L 19461487 19461911 -5081646 + DNAREP1_DM LINE Penelope 2 389 -205 3 733 499 122 12 12 chr3L 19461926 19462009 -5081548 + DNAREP1_DM LINE Penelope 512 594 0 3 733 452 227 110 29 chr3L 19462003 19462139 -5081418 + DNAREP1_DM LINE Penelope 249 395 -199 3 733 1934 40 58 45 chr3L 19462182 19462473 -5081084 + DMCR1A LINE CR1 41 335 -4135 3 733 14752 38 47 6 chr3L 19462460 19464256 -5079301 + DMCR1A LINE CR1 2597 4467 -3 3 733 307 235 152 5 chr3L 19464267 19464377 -5079180 + DNAREP1_DM LINE Penelope 432 535 -59 3 733 586 93 484 16 chr3L 19464569 19464693 -5078864 - DNAREP1_DM LINE Penelope -119 475 294 3 733 349 254 61 35 chr3L 19466536 19466650 -5076907 + DNAREP1_DM LINE Penelope 314 430 -164 3 733 278 208 0 0 chr3L 19466694 19466742 -5076815 + DNAREP1_DM LINE Penelope 438 485 -109 3 733 24 0 0 0 chr3L 19466869 19466893 -5076664 + AT_rich Low_complexity Low_complexity 1 24 0 3 733 232 185 0 71 chr3L 19467599 19467669 -5075888 + DNAREP1_DM LINE Penelope 513 577 -17 3 733 339 148 911 0 chr3L 19469554 19469647 -5073910 - DNAREP1_DM LINE Penelope -7 587 403 3 733 268 88 0 0 chr3L 19469647 19469681 -5073876 + DNAREP1_DM LINE Penelope 1 34 -560 3 733 1635 123 214 3 chr3L 19469679 19469996 -5073561 - DNAREP1_DM LINE Penelope -63 531 148 3 733 797 236 98 36 chr3L 19470200 19470424 -5073133 - DNAREP1_DM LINE Penelope -11 583 346 3 733 22 0 0 0 chr3L 19472281 19472303 -5071254 + AT_rich Low_complexity Low_complexity 1 22 0 3 733 21 0 0 0 chr3L 19473298 19473319 -5070238 + AT_rich Low_complexity Low_complexity 1 21 0 3 733 21 0 0 0 chr3L 19473370 19473391 -5070166 + AT_rich Low_complexity Low_complexity 1 21 0 3 733 237 149 12 98 chr3L 19475400 19475482 -5068075 + A-rich Low_complexity Low_complexity 3 77 0 3 733 27 29 0 0 chr3L 19476091 19476125 -5067432 + AT_rich Low_complexity Low_complexity 1 34 0 3 733 3679 2 0 2 chr3L 19480325 19480728 -5062829 + STALKER4_LTR LTR Gypsy 1 402 0 3 733 27 0 0 0 chr3L 19481669 19481696 -5061861 + AT_rich Low_complexity Low_complexity 1 27 0 3 733 1406 93 62 25 chr3L 19481844 19482086 -5061471 - DNAREP1_DM LINE Penelope -342 252 2 3 733 315 169 34 0 chr3L 19484072 19484131 -5059426 + DNAREP1_DM LINE Penelope 6 66 -528 3 733 610 150 156 15 chr3L 19484254 19484389 -5059168 + DNAREP1_DM LINE Penelope 441 594 0 3 733 31 76 0 0 chr3L 19487037 19487103 -5056454 + AT_rich Low_complexity Low_complexity 1 66 0 3 733 23 54 0 0 chr3L 19488671 19488708 -5054849 + AT_rich Low_complexity Low_complexity 1 37 0 3 733 22 35 0 0 chr3L 19494138 19494167 -5049390 + AT_rich Low_complexity Low_complexity 1 29 0 3 733 23 54 0 0 chr3L 19494671 19494708 -5048849 + AT_rich Low_complexity Low_complexity 1 37 0 3 733 197 108 27 0 chr3L 19498165 19498202 -5045355 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 3 733 234 105 0 0 chr3L 19506101 19506139 -5037418 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 733 25 0 0 0 chr3L 19507666 19507691 -5035866 + AT_rich Low_complexity Low_complexity 1 25 0 3 733 24 0 0 0 chr3L 19508632 19508656 -5034901 + AT_rich Low_complexity Low_complexity 1 24 0 3 733 30 27 0 0 chr3L 19513566 19513603 -5029954 + AT_rich Low_complexity Low_complexity 1 37 0 3 733 22 88 0 0 chr3L 19514675 19514732 -5028825 + AT_rich Low_complexity Low_complexity 1 57 0 3 733 21 36 0 0 chr3L 19514796 19514824 -5028733 + AT_rich Low_complexity Low_complexity 1 28 0 3 733 189 196 0 0 chr3L 19515990 19516036 -5027521 + (TCCG)n Simple_repeat Simple_repeat 3 48 0 3 733 28 29 0 0 chr3L 19520504 19520539 -5023018 + AT_rich Low_complexity Low_complexity 1 35 0 3 733 24 0 0 0 chr3L 19522724 19522748 -5020809 + AT_rich Low_complexity Low_complexity 1 24 0 3 733 195 42 0 0 chr3L 19525045 19525069 -5018488 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 733 243 204 0 0 chr3L 19525906 19525960 -5017597 + (ATTCG)n Simple_repeat Simple_repeat 1 54 0 3 734 23 54 0 0 chr3L 19530847 19530884 -5012673 + AT_rich Low_complexity Low_complexity 1 37 0 3 734 24 0 0 0 chr3L 19531378 19531402 -5012155 + AT_rich Low_complexity Low_complexity 1 24 0 3 734 21 36 0 0 chr3L 19540354 19540382 -5003175 + AT_rich Low_complexity Low_complexity 1 28 0 3 734 26 64 0 0 chr3L 19541178 19541225 -5002332 + AT_rich Low_complexity Low_complexity 1 47 0 3 734 29 0 0 0 chr3L 19543079 19543108 -5000449 + AT_rich Low_complexity Low_complexity 1 29 0 3 734 25 75 0 0 chr3L 19550389 19550442 -4993115 + AT_rich Low_complexity Low_complexity 1 53 0 3 734 26 30 0 0 chr3L 19550558 19550591 -4992966 + AT_rich Low_complexity Low_complexity 1 33 0 3 734 24 53 0 0 chr3L 19550623 19550661 -4992896 + AT_rich Low_complexity Low_complexity 1 38 0 3 734 238 254 18 0 chr3L 19551520 19551575 -4991982 + (TTCGGG)n Simple_repeat Simple_repeat 5 60 0 3 734 252 122 0 0 chr3L 19552666 19552707 -4990850 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 734 225 265 0 0 chr3L 19553545 19553613 -4989944 + A-rich Low_complexity Low_complexity 1 68 0 3 734 295 193 0 43 chr3L 19553747 19553839 -4989718 - ROO_I LTR Pao -7517 739 652 3 734 23 33 0 0 chr3L 19553974 19554004 -4989553 + AT_rich Low_complexity Low_complexity 1 30 0 3 734 37 62 0 0 chr3L 19554452 19554517 -4989040 + AT_rich Low_complexity Low_complexity 1 65 0 3 734 216 179 0 0 chr3L 19556032 19556071 -4987486 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 734 180 111 0 0 chr3L 19557109 19557136 -4986421 + (AAGTG)n Simple_repeat Simple_repeat 2 28 0 3 734 202 204 0 0 chr3L 19557449 19557498 -4986059 + (CCCCAA)n Simple_repeat Simple_repeat 3 51 0 3 734 25 83 0 0 chr3L 19559792 19559852 -4983705 + AT_rich Low_complexity Low_complexity 1 60 0 3 734 21 71 0 0 chr3L 19560516 19560558 -4982999 + AT_rich Low_complexity Low_complexity 1 42 0 3 734 21 0 0 0 chr3L 19561260 19561281 -4982276 + AT_rich Low_complexity Low_complexity 1 21 0 3 734 30 45 0 0 chr3L 19562025 19562069 -4981488 + AT_rich Low_complexity Low_complexity 1 44 0 3 734 186 43 0 0 chr3L 19562992 19563015 -4980542 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 3 734 249 213 0 47 chr3L 19564522 19564586 -4978971 + GA-rich Low_complexity Low_complexity 2 62 0 3 734 375 121 0 0 chr3L 19572613 19572671 -4970886 + (TCCA)n Simple_repeat Simple_repeat 4 61 0 3 734 334 258 16 24 chr3L 19574048 19574175 -4969382 + (TTCGGG)n Simple_repeat Simple_repeat 1 126 0 3 734 23 0 0 0 chr3L 19574578 19574601 -4968956 + AT_rich Low_complexity Low_complexity 1 23 0 3 734 276 77 0 0 chr3L 19577049 19577088 -4966469 + (CAA)n Simple_repeat Simple_repeat 3 41 0 3 734 249 192 0 0 chr3L 19577137 19577189 -4966368 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 734 33 25 0 0 chr3L 19578098 19578138 -4965419 + AT_rich Low_complexity Low_complexity 1 40 0 3 734 21 57 0 0 chr3L 19578404 19578439 -4965118 + AT_rich Low_complexity Low_complexity 1 35 0 3 734 21 0 0 0 chr3L 19581162 19581183 -4962374 + AT_rich Low_complexity Low_complexity 1 21 0 3 734 27 49 0 0 chr3L 19583869 19583910 -4959647 + AT_rich Low_complexity Low_complexity 1 41 0 3 734 23 0 0 0 chr3L 19584889 19584912 -4958645 + AT_rich Low_complexity Low_complexity 1 23 0 3 734 29 47 0 0 chr3L 19586397 19586440 -4957117 + AT_rich Low_complexity Low_complexity 1 43 0 3 734 220 250 0 0 chr3L 19595890 19595942 -4947615 + (CGG)n Simple_repeat Simple_repeat 3 54 0 3 734 29 0 0 0 chr3L 19598549 19598578 -4944979 + AT_rich Low_complexity Low_complexity 1 29 0 3 734 21 36 0 0 chr3L 19598692 19598720 -4944837 + AT_rich Low_complexity Low_complexity 1 28 0 3 734 37 0 0 0 chr3L 19598729 19598766 -4944791 + AT_rich Low_complexity Low_complexity 1 37 0 3 734 26 0 0 0 chr3L 19607496 19607522 -4936035 + AT_rich Low_complexity Low_complexity 1 26 0 3 734 42 77 0 0 chr3L 19613455 19613546 -4930011 + AT_rich Low_complexity Low_complexity 1 91 0 3 734 224 30 30 0 chr3L 19617660 19617693 -4925864 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 734 21 0 0 0 chr3L 19621511 19621532 -4922025 + AT_rich Low_complexity Low_complexity 1 21 0 3 734 2470 109 123 105 chr3L 19621637 19622220 -4921337 + DNAREP1_DM LINE Penelope 1 594 0 3 734 180 114 54 54 chr3L 19623357 19623431 -4920126 + (CTA)n Simple_repeat Simple_repeat 1 74 0 3 734 23 0 0 0 chr3L 19629140 19629163 -4914394 + AT_rich Low_complexity Low_complexity 1 23 0 3 734 21 0 0 0 chr3L 19635996 19636017 -4907540 + AT_rich Low_complexity Low_complexity 1 21 0 3 734 28 29 0 0 chr3L 19636174 19636209 -4907348 + AT_rich Low_complexity Low_complexity 1 35 0 3 734 219 36 0 0 chr3L 19637179 19637207 -4906350 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 734 25 51 0 0 chr3L 19638193 19638232 -4905325 + AT_rich Low_complexity Low_complexity 1 39 0 3 734 21 0 0 0 chr3L 19638553 19638574 -4904983 + AT_rich Low_complexity Low_complexity 1 21 0 3 734 24 0 0 0 chr3L 19639044 19639068 -4904489 + AT_rich Low_complexity Low_complexity 1 24 0 3 734 25 0 0 0 chr3L 19639917 19639942 -4903615 + AT_rich Low_complexity Low_complexity 1 25 0 3 734 1118 62 365 32 chr3L 19640043 19640265 -4903292 + DMRP1 Unknown Unknown 4 299 -47 3 734 24 67 0 0 chr3L 19641557 19641602 -4901955 + AT_rich Low_complexity Low_complexity 1 45 0 3 734 225 0 0 0 chr3L 19643892 19643917 -4899640 + (T)n Simple_repeat Simple_repeat 1 25 0 3 734 423 98 0 0 chr3L 19644661 19644722 -4898835 + (TTG)n Simple_repeat Simple_repeat 3 63 0 3 734 217 289 0 0 chr3L 19645395 19645447 -4898110 + (CTG)n Simple_repeat Simple_repeat 2 53 0 3 734 204 295 0 0 chr3L 19646782 19646860 -4896697 + G-rich Low_complexity Low_complexity 6 83 0 3 734 204 40 0 0 chr3L 19650320 19650345 -4893212 + (CCG)n Simple_repeat Simple_repeat 3 27 0 3 734 207 0 0 0 chr3L 19654224 19654247 -4889310 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 734 210 37 0 0 chr3L 19660059 19660086 -4883471 + (A)n Simple_repeat Simple_repeat 1 27 0 3 735 21 36 0 0 chr3L 19660838 19660866 -4882691 + AT_rich Low_complexity Low_complexity 1 28 0 3 735 35 24 0 0 chr3L 19663022 19663064 -4880493 + AT_rich Low_complexity Low_complexity 1 42 0 3 735 189 0 0 0 chr3L 19663752 19663773 -4879784 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 735 258 281 0 0 chr3L 19666599 19666663 -4876894 + (TTCGGG)n Simple_repeat Simple_repeat 4 67 0 3 735 231 125 0 0 chr3L 19666750 19666790 -4876767 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 3 735 249 254 0 0 chr3L 19670228 19670291 -4873266 - DOC3_DM LINE Jockey -4167 573 511 3 735 280 155 14 14 chr3L 19674112 19674184 -4869373 + (CAG)n Simple_repeat Simple_repeat 3 74 0 3 735 207 208 0 20 chr3L 19676058 19676107 -4867450 + (CAG)n Simple_repeat Simple_repeat 2 49 0 3 735 254 167 42 0 chr3L 19676784 19676832 -4866725 + DNAREP1_DM LINE Penelope 1 50 -544 3 735 592 172 181 29 chr3L 19676839 19676977 -4866580 + DNAREP1_DM LINE Penelope 425 583 -11 3 735 2440 81 211 4 chr3L 19677294 19677785 -4865772 + DNAREP1_DM LINE Penelope 1 593 -1 3 735 271 190 0 0 chr3L 19678520 19678599 -4864958 - ROO_I LTR Pao -7524 732 654 3 735 249 83 0 0 chr3L 19679467 19679503 -4864054 + (CTG)n Simple_repeat Simple_repeat 3 38 0 3 735 183 114 0 0 chr3L 19680276 19680311 -4863246 + (CTG)n Simple_repeat Simple_repeat 1 35 0 3 735 27 29 0 0 chr3L 19681050 19681084 -4862473 + AT_rich Low_complexity Low_complexity 1 34 0 3 735 37 23 0 0 chr3L 19683130 19683174 -4860383 + AT_rich Low_complexity Low_complexity 1 44 0 3 735 249 98 0 0 chr3L 19683363 19683404 -4860153 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 735 204 146 0 68 chr3L 19685295 19685354 -4858203 + (TTGG)n Simple_repeat Simple_repeat 1 55 0 3 735 293 174 22 44 chr3L 19685612 19685702 -4857855 + (CAGAGA)n Simple_repeat Simple_repeat 2 89 0 3 735 22 35 0 0 chr3L 19686753 19686782 -4856775 + AT_rich Low_complexity Low_complexity 1 29 0 3 735 25 75 0 0 chr3L 19686936 19686989 -4856568 + AT_rich Low_complexity Low_complexity 1 53 0 3 735 207 125 0 0 chr3L 19687478 19687518 -4856039 + (TTG)n Simple_repeat Simple_repeat 1 40 0 3 735 264 231 0 0 chr3L 19687706 19687771 -4855786 + T-rich Low_complexity Low_complexity 1 65 0 3 735 201 176 0 0 chr3L 19688885 19688919 -4854638 + T-rich Low_complexity Low_complexity 1 34 0 3 735 21 0 0 0 chr3L 19690401 19690422 -4853135 + AT_rich Low_complexity Low_complexity 1 21 0 3 735 291 28 0 0 chr3L 19693357 19693393 -4850164 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 735 237 65 0 0 chr3L 19693504 19693535 -4850022 + (CGAAT)n Simple_repeat Simple_repeat 5 35 0 3 735 25 65 0 0 chr3L 19699161 19699207 -4844350 + AT_rich Low_complexity Low_complexity 1 46 0 3 735 251 93 0 23 chr3L 19699584 19699628 -4843929 + (GGTTG)n Simple_repeat Simple_repeat 5 47 0 3 735 43504 2 0 0 chr3L 19701620 19706341 -4837216 - DOC LINE Jockey -1 4724 4 3 735 189 0 0 0 chr3L 19712683 19712704 -4830853 + (CATA)n Simple_repeat Simple_repeat 2 22 0 3 735 23 0 0 0 chr3L 19712761 19712784 -4830773 + AT_rich Low_complexity Low_complexity 1 23 0 3 735 228 67 0 0 chr3L 19713997 19714027 -4829530 + (TCC)n Simple_repeat Simple_repeat 3 32 0 3 735 270 137 0 136 chr3L 19723639 19723698 -4819859 - DNAREP1_DM LINE Penelope -148 446 396 3 735 201 94 0 0 chr3L 19724337 19724369 -4819188 + (GA)n Simple_repeat Simple_repeat 2 33 0 3 735 393 117 0 0 chr3L 19725195 19725255 -4818302 + (CATAC)n Simple_repeat Simple_repeat 5 64 0 3 735 198 0 0 0 chr3L 19725726 19725748 -4817809 + (TAA)n Simple_repeat Simple_repeat 1 22 0 3 735 216 0 0 0 chr3L 19728021 19728045 -4815512 + (ATG)n Simple_repeat Simple_repeat 3 26 0 3 735 194 143 0 20 chr3L 19730096 19730146 -4813411 + (GCTG)n Simple_repeat Simple_repeat 2 50 0 3 735 24 0 0 0 chr3L 19730278 19730302 -4813255 + AT_rich Low_complexity Low_complexity 1 24 0 3 735 258 56 0 0 chr3L 19732294 19732330 -4811227 + (A)n Simple_repeat Simple_repeat 1 36 0 3 735 43417 2 0 1 chr3L 19733031 19737757 -4805800 - DOC LINE Jockey 0 4725 4 3 735 189 0 0 0 chr3L 19744099 19744120 -4799437 + (CATA)n Simple_repeat Simple_repeat 2 22 0 3 735 23 0 0 0 chr3L 19744177 19744200 -4799357 + AT_rich Low_complexity Low_complexity 1 23 0 3 735 228 67 0 0 chr3L 19745413 19745443 -4798114 + (TCC)n Simple_repeat Simple_repeat 3 32 0 3 735 270 137 0 136 chr3L 19755054 19755113 -4788444 - DNAREP1_DM LINE Penelope -148 446 396 3 735 201 94 0 0 chr3L 19755752 19755784 -4787773 + (GA)n Simple_repeat Simple_repeat 2 33 0 3 735 393 117 0 0 chr3L 19756610 19756670 -4786887 + (CATAC)n Simple_repeat Simple_repeat 5 64 0 3 735 198 0 0 0 chr3L 19757141 19757163 -4786394 + (TAA)n Simple_repeat Simple_repeat 1 22 0 3 735 216 0 0 0 chr3L 19759436 19759460 -4784097 + (ATG)n Simple_repeat Simple_repeat 3 26 0 3 735 194 143 0 20 chr3L 19761511 19761561 -4781996 + (GCTG)n Simple_repeat Simple_repeat 2 50 0 3 735 24 0 0 0 chr3L 19761693 19761717 -4781840 + AT_rich Low_complexity Low_complexity 1 24 0 3 735 258 56 0 0 chr3L 19763708 19763744 -4779813 + (A)n Simple_repeat Simple_repeat 1 36 0 3 735 43639 0 0 1 chr3L 19764445 19769173 -4774384 - DOC LINE Jockey 0 4725 2 3 735 189 0 0 0 chr3L 19770411 19770432 -4773125 + (CATTC)n Simple_repeat Simple_repeat 4 24 0 3 735 23 0 0 0 chr3L 19771243 19771266 -4772291 + AT_rich Low_complexity Low_complexity 1 23 0 3 735 210 273 0 0 chr3L 19771349 19771404 -4772153 + (CAAA)n Simple_repeat Simple_repeat 4 58 0 3 735 21 82 0 0 chr3L 19772053 19772102 -4771455 + AT_rich Low_complexity Low_complexity 1 49 0 3 735 24 85 0 0 chr3L 19773382 19773441 -4770116 + AT_rich Low_complexity Low_complexity 1 59 0 3 735 27 62 0 0 chr3L 19776092 19776140 -4767417 + AT_rich Low_complexity Low_complexity 1 48 0 3 735 327 252 43 78 chr3L 19780020 19780136 -4763421 + DNAREP1_DM LINE Penelope 367 478 -116 3 735 194 0 39 0 chr3L 19780137 19780163 -4763394 + (AATAG)n Simple_repeat Simple_repeat 5 31 0 3 735 333 234 0 0 chr3L 19780166 19780243 -4763314 + DNAREP1_DM LINE Penelope 518 594 0 3 735 222 214 0 41 chr3L 19785489 19785562 -4757995 + (TTTAA)n Simple_repeat Simple_repeat 2 71 0 3 736 22 0 0 0 chr3L 19791989 19792011 -4751546 + AT_rich Low_complexity Low_complexity 1 22 0 3 736 34 24 0 0 chr3L 19794490 19794531 -4749026 + AT_rich Low_complexity Low_complexity 1 41 0 3 736 21 0 0 0 chr3L 19805975 19805996 -4737561 + AT_rich Low_complexity Low_complexity 1 21 0 3 736 186 43 0 0 chr3L 19811468 19811491 -4732066 + (CAA)n Simple_repeat Simple_repeat 1 23 0 3 736 180 111 0 0 chr3L 19811738 19811765 -4731792 + (CACCAT)n Simple_repeat Simple_repeat 3 29 0 3 736 215 338 0 0 chr3L 19812349 19812420 -4731137 + (CGG)n Simple_repeat Simple_repeat 1 71 0 3 736 4425 6 0 0 chr3L 19813440 19813921 -4729636 - T412LTR LTR LTR 0 481 1 3 736 61912 2 0 10 chr3L 19813811 19820779 -4722778 - DM412 LTR Gypsy 0 6897 1 3 736 4425 6 0 0 chr3L 19820465 19820946 -4722611 - T412LTR LTR LTR 0 481 1 3 736 210 118 0 0 chr3L 19821523 19821557 -4722000 + (CAA)n Simple_repeat Simple_repeat 2 35 0 3 736 214 266 0 0 chr3L 19822573 19822637 -4720920 + A-rich Low_complexity Low_complexity 1 64 0 3 736 31 0 0 0 chr3L 19822737 19822768 -4720789 + AT_rich Low_complexity Low_complexity 1 31 0 3 736 201 167 24 0 chr3L 19825130 19825172 -4718385 + (CTG)n Simple_repeat Simple_repeat 1 43 0 3 736 213 213 26 13 chr3L 19827583 19827659 -4715898 + (TTTAA)n Simple_repeat Simple_repeat 4 80 0 3 736 25 31 0 0 chr3L 19833144 19833176 -4710381 + AT_rich Low_complexity Low_complexity 1 32 0 3 736 298 172 9 66 chr3L 19835939 19836045 -4707512 + ROO_I LTR Pao 644 743 -7513 3 736 225 239 0 0 chr3L 19836914 19836981 -4706576 + (CAG)n Simple_repeat Simple_repeat 3 69 0 3 736 189 121 0 0 chr3L 19837254 19837287 -4706270 + (CAG)n Simple_repeat Simple_repeat 1 33 0 3 736 209 161 0 0 chr3L 19837497 19837528 -4706029 + (CAG)n Simple_repeat Simple_repeat 1 31 0 3 736 210 150 0 0 chr3L 19837701 19837741 -4705816 + (CAG)n Simple_repeat Simple_repeat 1 40 0 3 736 28 0 0 0 chr3L 19838264 19838292 -4705265 + AT_rich Low_complexity Low_complexity 1 28 0 3 736 21 0 0 0 chr3L 19839286 19839307 -4704250 + AT_rich Low_complexity Low_complexity 1 21 0 3 736 4017 0 0 0 chr3L 19841656 19842084 -4701473 - ROO_LTR LTR Pao 0 428 1 3 736 74738 1 0 2 chr3L 19842084 19850360 -4693197 - ROO_I LTR Pao 0 8256 1 3 736 4017 0 0 0 chr3L 19850360 19850788 -4692769 - ROO_LTR LTR Pao 0 428 1 3 736 23 54 0 0 chr3L 19853981 19854018 -4689539 + AT_rich Low_complexity Low_complexity 1 37 0 3 736 25 51 0 0 chr3L 19854349 19854388 -4689169 + AT_rich Low_complexity Low_complexity 1 39 0 3 736 614 128 147 0 chr3L 19854388 19854497 -4689060 - DMRT1B LINE R1 -5058 125 1 3 736 12401 92 3 2 chr3L 19854974 19856707 -4686850 + S_DM DNA Tc1 1 1736 0 3 736 301 250 0 0 chr3L 19857223 19857291 -4686266 - ROO_I LTR Pao -6539 1717 1650 3 736 21490 57 39 13 chr3L 19857300 19860141 -4683416 - DMCR1A LINE CR1 -219 4251 1337 3 736 30 0 0 0 chr3L 19866425 19866455 -4677102 + AT_rich Low_complexity Low_complexity 1 30 0 3 736 324 127 0 0 chr3L 19874858 19874913 -4668644 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 736 234 91 0 0 chr3L 19880815 19880848 -4662709 + (TCC)n Simple_repeat Simple_repeat 2 34 0 3 736 214 319 0 11 chr3L 19881444 19881536 -4662021 + CT-rich Low_complexity Low_complexity 2 92 0 3 736 225 265 0 0 chr3L 19881900 19881968 -4661589 + T-rich Low_complexity Low_complexity 1 68 0 3 736 21 0 0 0 chr3L 19882064 19882085 -4661472 + AT_rich Low_complexity Low_complexity 1 21 0 3 736 300 70 0 0 chr3L 19882297 19882340 -4661217 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 736 31 44 0 0 chr3L 19883987 19884032 -4659525 + AT_rich Low_complexity Low_complexity 1 45 0 3 736 26 0 0 0 chr3L 19884296 19884322 -4659235 + AT_rich Low_complexity Low_complexity 1 26 0 3 736 254 167 0 60 chr3L 19884429 19884512 -4659045 + T-rich Low_complexity Low_complexity 2 79 0 3 736 221 318 0 0 chr3L 19884636 19884702 -4658855 + (TCG)n Simple_repeat Simple_repeat 1 66 0 3 736 284 203 0 39 chr3L 19884782 19884859 -4658698 - ROO_I LTR Pao -7526 730 657 3 736 303 196 0 71 chr3L 19885415 19885514 -4658043 - ROO_I LTR Pao -7529 727 636 3 736 293 274 0 0 chr3L 19887080 19887153 -4656404 - ROO_I LTR Pao -7531 725 653 3 736 180 152 0 0 chr3L 19888930 19888963 -4654594 + (TTG)n Simple_repeat Simple_repeat 1 33 0 3 736 180 176 0 0 chr3L 19889534 19889568 -4653989 + (CTG)n Simple_repeat Simple_repeat 2 35 0 3 736 21 0 0 0 chr3L 19895671 19895692 -4647865 + AT_rich Low_complexity Low_complexity 1 21 0 3 736 184 222 12 24 chr3L 19895940 19896023 -4647534 + (GAGTG)n Simple_repeat Simple_repeat 1 82 0 3 736 195 139 0 0 chr3L 19896567 19896603 -4646954 + (CAA)n Simple_repeat Simple_repeat 2 37 0 3 736 222 235 0 0 chr3L 19896663 19896714 -4646843 + (TTG)n Simple_repeat Simple_repeat 3 53 0 3 736 204 40 0 0 chr3L 19897986 19898011 -4645546 + (CAA)n Simple_repeat Simple_repeat 1 25 0 3 736 257 141 35 12 chr3L 19898038 19898124 -4645433 + (CAA)n Simple_repeat Simple_repeat 1 88 0 3 736 24 0 0 0 chr3L 19898442 19898466 -4645091 + AT_rich Low_complexity Low_complexity 1 24 0 3 736 207 0 0 0 chr3L 19898695 19898718 -4644839 + (A)n Simple_repeat Simple_repeat 1 23 0 3 736 209 222 0 0 chr3L 19900514 19900559 -4642998 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 736 243 88 0 0 chr3L 19910280 19910314 -4633243 + (GGAGAA)n Simple_repeat Simple_repeat 6 39 0 3 736 23 0 0 0 chr3L 19911555 19911578 -4631979 + AT_rich Low_complexity Low_complexity 1 23 0 3 736 246 95 0 0 chr3L 19912023 19912065 -4631492 + (GGA)n Simple_repeat Simple_repeat 2 43 0 3 736 209 195 0 24 chr3L 19912222 19912264 -4631293 + (CTG)n Simple_repeat Simple_repeat 1 41 0 3 736 207 139 0 0 chr3L 19913400 19913436 -4630121 + (CTG)n Simple_repeat Simple_repeat 3 38 0 3 736 195 139 0 0 chr3L 19914633 19914669 -4628888 + (TTG)n Simple_repeat Simple_repeat 2 37 0 3 736 29 60 0 0 chr3L 19917843 19917893 -4625664 + AT_rich Low_complexity Low_complexity 1 50 0 3 736 21 71 0 0 chr3L 19920146 19920188 -4623369 + AT_rich Low_complexity Low_complexity 1 42 0 3 736 40 0 0 0 chr3L 19922078 19922118 -4621439 + AT_rich Low_complexity Low_complexity 1 40 0 3 736 270 0 0 0 chr3L 19922385 19922415 -4621142 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 737 21 0 0 0 chr3L 19925450 19925471 -4618086 + AT_rich Low_complexity Low_complexity 1 21 0 3 737 309 89 0 0 chr3L 19925610 19925655 -4617902 + (CAGT)n Simple_repeat Simple_repeat 1 45 0 3 737 36 40 0 0 chr3L 19927408 19927458 -4616099 + AT_rich Low_complexity Low_complexity 1 50 0 3 737 22 0 0 0 chr3L 19927661 19927683 -4615874 + AT_rich Low_complexity Low_complexity 1 22 0 3 737 195 42 0 0 chr3L 19929392 19929416 -4614141 + (A)n Simple_repeat Simple_repeat 1 24 0 3 737 27 29 0 0 chr3L 19931908 19931942 -4611615 + AT_rich Low_complexity Low_complexity 1 34 0 3 737 239 231 0 0 chr3L 19932456 19932508 -4611049 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 737 31 0 0 0 chr3L 19933742 19933773 -4609784 + AT_rich Low_complexity Low_complexity 1 31 0 3 737 26 0 0 0 chr3L 19934724 19934750 -4608807 + AT_rich Low_complexity Low_complexity 1 26 0 3 737 28 29 0 0 chr3L 19934858 19934893 -4608664 + AT_rich Low_complexity Low_complexity 1 35 0 3 737 225 146 0 0 chr3L 19936814 19936862 -4606695 + (T)n Simple_repeat Simple_repeat 1 48 0 3 737 180 0 0 0 chr3L 19937688 19937708 -4605849 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 737 1662 89 106 79 chr3L 19940441 19940770 -4602787 - DMRP1 Unknown Unknown -7 339 2 3 737 31 58 0 0 chr3L 19940786 19940838 -4602719 + AT_rich Low_complexity Low_complexity 1 52 0 3 737 23 33 0 0 chr3L 19941603 19941633 -4601924 + AT_rich Low_complexity Low_complexity 1 30 0 3 737 23 0 0 0 chr3L 19944389 19944412 -4599145 + AT_rich Low_complexity Low_complexity 1 23 0 3 737 23 0 0 0 chr3L 19945888 19945911 -4597646 + AT_rich Low_complexity Low_complexity 1 23 0 3 737 28 0 0 0 chr3L 19946525 19946553 -4597004 + AT_rich Low_complexity Low_complexity 1 28 0 3 737 246 266 25 25 chr3L 19949993 19950074 -4593483 + C-rich Low_complexity Low_complexity 2 82 0 3 737 21 57 0 0 chr3L 19950297 19950332 -4593225 + AT_rich Low_complexity Low_complexity 1 35 0 3 737 376 125 0 5 chr3L 19950510 19950578 -4592979 - DNAREP1_DM LINE Penelope -107 487 431 3 737 347 254 71 0 chr3L 19950660 19950786 -4592771 - DNAREP1_DM LINE Penelope -459 135 1 3 737 21 36 0 0 chr3L 19953174 19953202 -4590355 + AT_rich Low_complexity Low_complexity 1 28 0 3 737 22 0 0 0 chr3L 19955593 19955615 -4587942 + AT_rich Low_complexity Low_complexity 1 22 0 3 737 21 0 0 0 chr3L 19959162 19959183 -4584374 + AT_rich Low_complexity Low_complexity 1 21 0 3 737 209 95 0 67 chr3L 19960016 19960061 -4583496 + (GTTTG)n Simple_repeat Simple_repeat 5 46 0 3 737 247 182 150 38 chr3L 19961767 19961847 -4581710 + DNAREP1_DM LINE Penelope 369 457 -137 3 737 183 42 0 0 chr3L 19962344 19962368 -4581189 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 737 29 0 0 0 chr3L 19962438 19962467 -4581090 + AT_rich Low_complexity Low_complexity 1 29 0 3 737 189 0 0 0 chr3L 19965888 19965909 -4577648 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 737 280 202 89 0 chr3L 19967020 19967099 -4576458 - DNAREP1_DM LINE Penelope -41 553 468 3 737 26 0 0 0 chr3L 19967331 19967357 -4576200 + AT_rich Low_complexity Low_complexity 1 26 0 3 737 698 104 0 0 chr3L 19968268 19968374 -4575183 - DMRP1 Unknown Unknown -227 119 14 3 737 198 71 0 0 chr3L 19974087 19974115 -4569442 + (GATTG)n Simple_repeat Simple_repeat 2 29 0 3 737 23 86 0 0 chr3L 19974373 19974431 -4569126 + AT_rich Low_complexity Low_complexity 1 58 0 3 737 21 71 0 0 chr3L 19974482 19974524 -4569033 + AT_rich Low_complexity Low_complexity 1 42 0 3 737 257 261 0 0 chr3L 19975823 19975888 -4567669 + GA-rich Low_complexity Low_complexity 1 65 0 3 737 223 224 9 9 chr3L 19976699 19976807 -4566750 + (CAG)n Simple_repeat Simple_repeat 3 110 0 3 737 27 29 0 0 chr3L 19979054 19979088 -4564469 + AT_rich Low_complexity Low_complexity 1 34 0 3 737 298 305 7 7 chr3L 19979963 19980105 -4563452 + (CAG)n Simple_repeat Simple_repeat 2 143 0 3 737 23 0 0 0 chr3L 19982261 19982284 -4561273 + AT_rich Low_complexity Low_complexity 1 23 0 3 737 21 0 0 0 chr3L 19982505 19982526 -4561031 + AT_rich Low_complexity Low_complexity 1 21 0 3 737 204 97 0 0 chr3L 19983428 19983459 -4560098 + (CAGTA)n Simple_repeat Simple_repeat 4 34 0 3 737 220 313 15 0 chr3L 19985224 19985291 -4558266 + (CATATA)n Simple_repeat Simple_repeat 5 72 0 3 737 204 67 0 0 chr3L 19988195 19988225 -4555332 + (A)n Simple_repeat Simple_repeat 1 30 0 3 737 21 36 0 0 chr3L 19988347 19988375 -4555182 + AT_rich Low_complexity Low_complexity 1 28 0 3 737 180 0 0 0 chr3L 19989371 19989391 -4554166 + (CTATT)n Simple_repeat Simple_repeat 3 22 0 3 737 21 0 0 0 chr3L 19989924 19989945 -4553612 + AT_rich Low_complexity Low_complexity 1 21 0 3 737 28 48 0 0 chr3L 19990689 19990731 -4552826 + AT_rich Low_complexity Low_complexity 1 42 0 3 737 24 0 0 0 chr3L 19993773 19993797 -4549760 + AT_rich Low_complexity Low_complexity 1 24 0 3 737 202 146 24 0 chr3L 19993873 19993914 -4549643 + A-rich Low_complexity Low_complexity 3 44 0 3 737 22 35 0 0 chr3L 19995321 19995350 -4548207 + AT_rich Low_complexity Low_complexity 1 29 0 3 737 40 67 0 0 chr3L 19997974 19998049 -4545508 + AT_rich Low_complexity Low_complexity 1 75 0 3 737 22 0 0 0 chr3L 19999142 19999164 -4544393 + AT_rich Low_complexity Low_complexity 1 22 0 3 737 243 0 0 0 chr3L 20016782 20016809 -4526748 + (A)n Simple_repeat Simple_repeat 1 27 0 3 737 213 39 0 0 chr3L 20018587 20018613 -4524944 + (A)n Simple_repeat Simple_repeat 1 26 0 3 737 228 67 0 0 chr3L 20019023 20019053 -4524504 + (TTC)n Simple_repeat Simple_repeat 2 31 0 3 737 204 222 0 0 chr3L 20019499 20019535 -4524022 + polypyrimidine Low_complexity Low_complexity 2 37 0 3 737 180 0 0 0 chr3L 20021638 20021658 -4521899 + (TATAG)n Simple_repeat Simple_repeat 1 20 0 3 737 25 51 0 0 chr3L 20022318 20022357 -4521200 + AT_rich Low_complexity Low_complexity 1 39 0 3 737 37 62 0 0 chr3L 20023480 20023545 -4520012 + AT_rich Low_complexity Low_complexity 1 65 0 3 737 22 70 0 0 chr3L 20024493 20024536 -4519021 + AT_rich Low_complexity Low_complexity 1 43 0 3 737 52 64 0 0 chr3L 20026699 20026793 -4516764 + AT_rich Low_complexity Low_complexity 1 94 0 3 737 654 128 0 8 chr3L 20027160 20027278 -4516279 - DNAREP1_DM LINE Penelope -332 262 146 3 737 41 36 0 0 chr3L 20027376 20027431 -4516126 + AT_rich Low_complexity Low_complexity 1 55 0 3 737 22 0 0 0 chr3L 20030527 20030549 -4513008 + AT_rich Low_complexity Low_complexity 1 22 0 3 737 1669 81 3 116 chr3L 20033671 20034007 -4509550 + Invader3_LTR LTR Gypsy 1 298 0 3 737 270 73 0 0 chr3L 20034470 20034511 -4509046 + (CATCG)n Simple_repeat Simple_repeat 4 44 0 3 737 221 109 22 0 chr3L 20034957 20035003 -4508554 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 737 309 275 32 32 chr3L 20037022 20037146 -4506411 + DNAREP1_DM LINE Penelope 322 445 -149 3 737 25 75 0 0 chr3L 20044865 20044918 -4498639 + AT_rich Low_complexity Low_complexity 1 53 0 3 737 27 29 0 0 chr3L 20045002 20045036 -4498521 + AT_rich Low_complexity Low_complexity 1 34 0 3 737 26 88 0 0 chr3L 20046863 20046931 -4496626 + AT_rich Low_complexity Low_complexity 1 68 0 3 737 27 73 0 0 chr3L 20047313 20047368 -4496189 + AT_rich Low_complexity Low_complexity 1 55 0 3 737 23 0 0 0 chr3L 20048535 20048558 -4494999 + AT_rich Low_complexity Low_complexity 1 23 0 3 737 589 74 0 0 chr3L 20048666 20048747 -4494810 + DNAREP1_DM LINE Penelope 5 85 -509 3 737 969 81 101 48 chr3L 20048737 20048905 -4494652 + DNAREP1_DM LINE Penelope 414 590 -4 3 737 36 70 0 0 chr3L 20048930 20049001 -4494556 + AT_rich Low_complexity Low_complexity 1 71 0 3 737 180 97 0 0 chr3L 20049788 20049819 -4493738 + (A)n Simple_repeat Simple_repeat 1 31 0 3 738 234 105 0 0 chr3L 20061934 20061972 -4481585 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 738 23 0 0 0 chr3L 20072656 20072679 -4470878 + AT_rich Low_complexity Low_complexity 1 23 0 3 738 249 268 0 0 chr3L 20073256 20073312 -4470245 + (CATA)n Simple_repeat Simple_repeat 2 57 0 3 738 24 0 0 0 chr3L 20074899 20074923 -4468634 + AT_rich Low_complexity Low_complexity 1 24 0 3 738 183 42 0 0 chr3L 20075964 20075988 -4467569 + (CTA)n Simple_repeat Simple_repeat 2 25 0 3 738 213 235 20 0 chr3L 20079257 20079308 -4464249 + (GGTTG)n Simple_repeat Simple_repeat 5 56 0 3 738 270 81 0 0 chr3L 20079342 20079379 -4464178 + (ACTG)n Simple_repeat Simple_repeat 1 37 0 3 738 218 167 0 0 chr3L 20081004 20081040 -4462517 + (GCTG)n Simple_repeat Simple_repeat 3 38 0 3 738 24 0 0 0 chr3L 20082926 20082950 -4460607 + AT_rich Low_complexity Low_complexity 1 24 0 3 738 39 38 0 0 chr3L 20082981 20083034 -4460523 + AT_rich Low_complexity Low_complexity 1 53 0 3 738 26 64 0 0 chr3L 20084765 20084812 -4458745 + AT_rich Low_complexity Low_complexity 1 47 0 3 738 30 59 0 0 chr3L 20085687 20085738 -4457819 + AT_rich Low_complexity Low_complexity 1 51 0 3 738 297 151 0 0 chr3L 20095014 20095067 -4448490 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 3 738 183 42 0 0 chr3L 20096612 20096636 -4446921 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 738 235 224 17 0 chr3L 20097883 20097941 -4445616 + CT-rich Low_complexity Low_complexity 2 60 0 3 738 192 77 0 0 chr3L 20098152 20098178 -4445379 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 738 324 188 67 56 chr3L 20100742 20100832 -4442725 - PENELOPE LINE Penelope -120 4041 3951 3 738 612 169 8 31 chr3L 20100789 20100917 -4442640 + DNAREP1_DM LINE Penelope 35 159 -435 3 738 1249 102 198 47 chr3L 20101016 20101034 -4442523 + DNAREP1_DM LINE Penelope 298 315 -279 3 738 312 70 0 0 chr3L 20101034 20101077 -4442480 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 738 1249 102 198 47 chr3L 20101077 20101316 -4442241 + DNAREP1_DM LINE Penelope 316 593 -1 3 738 480 167 45 4 chr3L 20102989 20103143 -4440414 + DMRP1 Unknown Unknown 95 287 -59 3 738 3972 2 0 2 chr3L 20106812 20107241 -4436316 - ROO_LTR LTR Pao 0 428 1 3 738 49239 0 1 7 chr3L 20107241 20115583 -4427974 - ROO_I LTR Pao 0 8256 1 3 738 4002 2 0 0 chr3L 20115583 20116011 -4427546 - ROO_LTR LTR Pao 0 428 1 3 738 21 0 0 0 chr3L 20122035 20122056 -4421501 + AT_rich Low_complexity Low_complexity 1 21 0 3 738 28 71 0 0 chr3L 20134207 20134263 -4409294 + AT_rich Low_complexity Low_complexity 1 56 0 3 738 22 0 0 0 chr3L 20135715 20135737 -4407820 + AT_rich Low_complexity Low_complexity 1 22 0 3 738 33 0 0 0 chr3L 20137351 20137384 -4406173 + AT_rich Low_complexity Low_complexity 1 33 0 3 738 948 137 279 50 chr3L 20140453 20140727 -4402830 - DMRP1 Unknown Unknown -8 338 2 3 738 21 0 0 0 chr3L 20142624 20142645 -4400912 + AT_rich Low_complexity Low_complexity 1 21 0 3 738 24 0 0 0 chr3L 20143812 20143836 -4399721 + AT_rich Low_complexity Low_complexity 1 24 0 3 738 183 100 0 0 chr3L 20146214 20146244 -4397313 + (TGG)n Simple_repeat Simple_repeat 3 32 0 3 738 217 347 0 0 chr3L 20146737 20146832 -4396725 + (CCG)n Simple_repeat Simple_repeat 3 97 0 3 738 210 91 0 0 chr3L 20150074 20150107 -4393450 + (ATGGTG)n Simple_repeat Simple_repeat 6 38 0 3 738 234 156 0 0 chr3L 20150427 20150472 -4393085 + GA-rich Low_complexity Low_complexity 1 45 0 3 738 26 0 0 0 chr3L 20153586 20153612 -4389945 + AT_rich Low_complexity Low_complexity 1 26 0 3 738 21 82 0 0 chr3L 20155099 20155148 -4388409 + AT_rich Low_complexity Low_complexity 1 49 0 3 738 32 0 0 0 chr3L 20158196 20158228 -4385329 + AT_rich Low_complexity Low_complexity 1 32 0 3 738 201 74 0 0 chr3L 20158439 20158466 -4385091 + (T)n Simple_repeat Simple_repeat 1 27 0 3 738 318 26 0 0 chr3L 20158729 20158768 -4384789 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 3 738 264 250 0 0 chr3L 20160860 20160916 -4382641 + (CCCGAA)n Simple_repeat Simple_repeat 1 56 0 3 738 195 114 0 0 chr3L 20161759 20161794 -4381763 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 3 738 23 33 0 0 chr3L 20162984 20163014 -4380543 + AT_rich Low_complexity Low_complexity 1 30 0 3 738 27 0 0 0 chr3L 20163164 20163191 -4380366 + AT_rich Low_complexity Low_complexity 1 27 0 3 738 216 86 0 0 chr3L 20163518 20163553 -4380004 + (CACCAT)n Simple_repeat Simple_repeat 4 38 0 3 738 243 0 0 0 chr3L 20171018 20171045 -4372512 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 738 22 0 0 0 chr3L 20171308 20171330 -4372227 + AT_rich Low_complexity Low_complexity 1 22 0 3 738 198 0 0 0 chr3L 20172216 20172238 -4371319 + (A)n Simple_repeat Simple_repeat 1 22 0 3 738 21 0 0 0 chr3L 20172986 20173007 -4370550 + AT_rich Low_complexity Low_complexity 1 21 0 3 738 23 33 0 0 chr3L 20173387 20173417 -4370140 + AT_rich Low_complexity Low_complexity 1 30 0 3 738 219 69 0 0 chr3L 20173524 20173553 -4370004 + (CAAAC)n Simple_repeat Simple_repeat 3 31 0 3 738 240 103 52 0 chr3L 20176139 20176197 -4367360 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 738 203 158 0 0 chr3L 20176373 20176411 -4367146 + (CAG)n Simple_repeat Simple_repeat 3 40 0 3 738 21 36 0 0 chr3L 20177829 20177857 -4365700 + AT_rich Low_complexity Low_complexity 1 28 0 3 738 187 54 54 0 chr3L 20179609 20179646 -4363911 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 738 21 0 0 0 chr3L 20183613 20183634 -4359923 + AT_rich Low_complexity Low_complexity 1 21 0 3 739 670 110 0 25 chr3L 20185118 20185239 -4358318 + (TTG)n Simple_repeat Simple_repeat 2 119 0 3 739 180 111 0 0 chr3L 20191975 20192002 -4351555 + (TATG)n Simple_repeat Simple_repeat 2 28 0 3 739 26 0 0 0 chr3L 20197040 20197066 -4346491 + AT_rich Low_complexity Low_complexity 1 26 0 3 739 22 0 0 0 chr3L 20197254 20197276 -4346281 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 228 122 0 0 chr3L 20201997 20202038 -4341519 + (CCA)n Simple_repeat Simple_repeat 1 41 0 3 739 261 128 0 0 chr3L 20205712 20205759 -4337798 + (CTATA)n Simple_repeat Simple_repeat 5 51 0 3 739 2448 4 0 0 chr3L 20205759 20206026 -4337531 - MDG3_LTR LTR Gypsy 0 267 1 3 739 45677 1 0 0 chr3L 20206026 20211013 -4332544 - MDG3_I LTR Gypsy 0 4986 1 3 739 2448 4 0 0 chr3L 20211012 20211279 -4332278 - MDG3_LTR LTR Gypsy 0 267 1 3 739 27 0 0 0 chr3L 20211414 20211441 -4332116 + AT_rich Low_complexity Low_complexity 1 27 0 3 739 650 64 170 0 chr3L 20218498 20218592 -4324965 - DNAREP1_DM LINE Penelope -21 573 464 3 739 295 193 118 24 chr3L 20218598 20218683 -4324874 - DNAREP1_DM LINE Penelope -415 179 87 3 739 34 55 0 0 chr3L 20224362 20224417 -4319140 + AT_rich Low_complexity Low_complexity 1 55 0 3 739 204 40 0 0 chr3L 20226655 20226680 -4316877 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 739 223 204 0 31 chr3L 20228346 20228442 -4315115 + (CTG)n Simple_repeat Simple_repeat 3 95 0 3 739 240 100 0 0 chr3L 20229092 20229132 -4314425 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 3 739 189 74 0 0 chr3L 20229242 20229269 -4314288 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 3 739 183 42 0 0 chr3L 20229445 20229469 -4314088 + (TTG)n Simple_repeat Simple_repeat 1 24 0 3 739 207 114 0 0 chr3L 20229598 20229633 -4313924 + (CTG)n Simple_repeat Simple_repeat 1 35 0 3 739 227 243 29 19 chr3L 20230343 20230448 -4313109 + (CTG)n Simple_repeat Simple_repeat 2 107 0 3 739 241 174 0 58 chr3L 20230448 20230552 -4313005 - ROO_I LTR Pao -7513 743 646 3 739 309 100 0 0 chr3L 20230666 20230716 -4312841 + (CTG)n Simple_repeat Simple_repeat 1 50 0 3 739 280 174 52 42 chr3L 20230809 20230905 -4312652 - ROO_I LTR Pao -7513 743 647 3 739 21 0 0 0 chr3L 20231421 20231442 -4312115 + AT_rich Low_complexity Low_complexity 1 21 0 3 739 247 155 14 14 chr3L 20232581 20232653 -4310904 - ROO_I LTR Pao -7544 712 641 3 739 255 159 0 64 chr3L 20232982 20233076 -4310481 - ROO_I LTR Pao -7510 746 659 3 739 21 57 0 0 chr3L 20233892 20233927 -4309630 + AT_rich Low_complexity Low_complexity 1 35 0 3 739 231 103 0 0 chr3L 20234341 20234380 -4309177 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 739 24 67 0 0 chr3L 20235103 20235148 -4308409 + AT_rich Low_complexity Low_complexity 1 45 0 3 739 36 40 0 0 chr3L 20235505 20235555 -4308002 + AT_rich Low_complexity Low_complexity 1 50 0 3 739 253 352 0 0 chr3L 20241029 20241137 -4302420 + (CGG)n Simple_repeat Simple_repeat 2 109 0 3 739 210 256 0 0 chr3L 20241422 20241465 -4302092 + (TATG)n Simple_repeat Simple_repeat 2 44 0 3 739 578 131 131 0 chr3L 20245263 20245370 -4298187 - DMRP1 Unknown Unknown 0 346 226 3 739 694 148 24 8 chr3L 20245420 20245543 -4298014 - DMRP1 Unknown Unknown -218 128 4 3 739 186 103 0 0 chr3L 20245913 20245942 -4297615 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 739 25 31 0 0 chr3L 20246564 20246596 -4296961 + AT_rich Low_complexity Low_complexity 1 32 0 3 739 811 80 322 79 chr3L 20248644 20248896 -4294661 + DMRP1 Unknown Unknown 32 345 -1 3 739 203 240 0 0 chr3L 20249318 20249368 -4294189 + C-rich Low_complexity Low_complexity 4 53 0 3 739 5149 0 0 2 chr3L 20250484 20251043 -4292514 + POGO DNA Pogo 2 559 -1562 3 739 2589 0 143 2 chr3L 20251041 20251551 -4292006 + POGO DNA Pogo 1540 2121 0 3 739 194 33 67 0 chr3L 20252006 20252036 -4291521 + (TATG)n Simple_repeat Simple_repeat 2 33 0 3 739 278 111 0 0 chr3L 20252380 20252425 -4291132 - DNAREP1_DM LINE Penelope -21 573 529 3 739 527 215 129 24 chr3L 20252446 20252570 -4290987 - DNAREP1_DM LINE Penelope -151 443 307 3 739 600 171 0 79 chr3L 20252580 20252720 -4290837 - DNAREP1_DM LINE Penelope -465 129 1 3 739 24 0 0 0 chr3L 20261919 20261943 -4281614 + AT_rich Low_complexity Low_complexity 1 24 0 3 739 27 0 0 0 chr3L 20264559 20264586 -4278971 + AT_rich Low_complexity Low_complexity 1 27 0 3 739 25 31 0 0 chr3L 20265282 20265314 -4278243 + AT_rich Low_complexity Low_complexity 1 32 0 3 739 23 0 0 0 chr3L 20266020 20266043 -4277514 + AT_rich Low_complexity Low_complexity 1 23 0 3 739 21 36 0 0 chr3L 20268962 20268990 -4274567 + AT_rich Low_complexity Low_complexity 1 28 0 3 739 31 44 0 0 chr3L 20272387 20272432 -4271125 + AT_rich Low_complexity Low_complexity 1 45 0 3 739 285 250 86 57 chr3L 20276984 20277124 -4266433 + DNAREP1_DM LINE Penelope 5 148 -446 3 739 326 161 0 67 chr3L 20277116 20277176 -4266381 + DNAREP1_DM LINE Penelope 398 453 -141 3 739 21 36 0 0 chr3L 20279932 20279960 -4263597 + AT_rich Low_complexity Low_complexity 1 28 0 3 739 180 158 0 0 chr3L 20280454 20280492 -4263065 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 739 22 0 0 0 chr3L 20281065 20281087 -4262470 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 32 0 0 0 chr3L 20282849 20282881 -4260676 + AT_rich Low_complexity Low_complexity 1 32 0 3 739 24 32 0 0 chr3L 20283723 20283754 -4259803 + AT_rich Low_complexity Low_complexity 1 31 0 3 739 23 0 0 0 chr3L 20284338 20284361 -4259196 + AT_rich Low_complexity Low_complexity 1 23 0 3 739 26 30 0 0 chr3L 20288853 20288886 -4254671 + AT_rich Low_complexity Low_complexity 1 33 0 3 739 36 0 0 0 chr3L 20290357 20290393 -4253164 + AT_rich Low_complexity Low_complexity 1 36 0 3 739 22 0 0 0 chr3L 20290613 20290635 -4252922 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 23 33 0 0 chr3L 20295312 20295342 -4248215 + AT_rich Low_complexity Low_complexity 1 30 0 3 739 21 0 0 0 chr3L 20296988 20297009 -4246548 + AT_rich Low_complexity Low_complexity 1 21 0 3 739 302 129 0 61 chr3L 20299754 20299820 -4243737 - DNAREP1_DM LINE Penelope -97 497 436 3 739 28 0 0 0 chr3L 20300194 20300222 -4243335 + AT_rich Low_complexity Low_complexity 1 28 0 3 739 209 271 0 0 chr3L 20303561 20303609 -4239948 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 739 26 0 0 0 chr3L 20306547 20306573 -4236984 + AT_rich Low_complexity Low_complexity 1 26 0 3 739 22 35 0 0 chr3L 20307598 20307627 -4235930 + AT_rich Low_complexity Low_complexity 1 29 0 3 739 22 0 0 0 chr3L 20310753 20310775 -4232782 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 23 33 0 0 chr3L 20313243 20313273 -4230284 + AT_rich Low_complexity Low_complexity 1 30 0 3 740 326 169 0 0 chr3L 20316377 20316436 -4227121 + DMRT1B LINE R1 1 59 -5124 3 740 4410 143 249 22 chr3L 20316462 20317528 -4226029 + DMRT1B LINE R1 236 1544 -3639 3 740 573 96 43 0 chr3L 20317530 20317624 -4225933 + DMRT1B LINE R1 1748 1845 -3338 3 740 827 122 0 0 chr3L 20317619 20317750 -4225807 + DMRT1B LINE R1 3322 3452 -1731 3 740 198 167 16 32 chr3L 20317824 20317886 -4225671 + (CATA)n Simple_repeat Simple_repeat 2 62 0 3 740 1304 153 85 44 chr3L 20317892 20318298 -4225259 + QUASIMODO_LTR LTR Gypsy 31 581 -77 3 740 311 91 38 25 chr3L 20318716 20318795 -4224762 + (CAA)n Simple_repeat Simple_repeat 2 81 0 3 740 835 288 32 32 chr3L 20318816 20319311 -4224246 + QUASIMODO_I LTR Gypsy 448 942 -5118 3 740 207 269 0 0 chr3L 20319443 20319510 -4224047 + A-rich Low_complexity Low_complexity 2 68 0 3 740 309 304 62 31 chr3L 20319542 20319831 -4223726 + QUASIMODO_I LTR Gypsy 1204 1501 -4559 3 740 484 231 0 0 chr3L 20319839 20319960 -4223597 + QUASIMODO_I LTR Gypsy 2158 2278 -3782 3 740 918 249 54 6 chr3L 20319967 20320299 -4223258 + QUASIMODO_I LTR Gypsy 2676 3023 -3037 3 740 538 225 1 1 chr3L 20320308 20320477 -4223080 + QUASIMODO_I LTR Gypsy 4273 4536 -1524 3 740 583 234 50 13 chr3L 20320534 20320833 -4222724 + QUASIMODO_I LTR Gypsy 5261 5570 -490 3 740 22 22 0 62 chr3L 20320833 20320881 -4222676 + AT_rich Low_complexity Low_complexity 1 45 0 3 740 2020 20 16 0 chr3L 20320881 20321134 -4222423 - DM176_LTR LTR Gypsy 0 507 251 3 740 2208 7 0 78 chr3L 20321135 20321442 -4222115 - DM176_LTR LTR Gypsy -224 283 1 3 740 32319 5 8 8 chr3L 20321442 20325375 -4218182 - DM176_I LTR Gypsy 0 6420 2489 3 740 16567 14 9 9 chr3L 20325385 20327512 -4216045 - DM176_I LTR Gypsy -4165 2255 130 3 740 437 35 0 0 chr3L 20327523 20327580 -4215977 - DM176_LTR LTR Gypsy -200 307 251 3 740 2196 11 0 78 chr3L 20327581 20327888 -4215669 - DM176_LTR LTR Gypsy -224 283 1 3 740 36 23 0 0 chr3L 20327889 20327932 -4215625 + AT_rich Low_complexity Low_complexity 1 43 0 3 740 4558 22 19 3 chr3L 20327932 20328517 -4215040 - IDEFIX_LTR LTR Gypsy 0 594 1 3 740 11592 25 13 5 chr3L 20328517 20330036 -4213521 - IDEFIX_I LTR Gypsy 0 5628 4098 3 740 2102 11 4 50 chr3L 20330036 20330316 -4213241 + MDG3_LTR LTR Gypsy 1 267 0 3 740 18216 35 1 6 chr3L 20330316 20332684 -4210873 - IDEFIX_I LTR Gypsy -1527 4101 1746 3 740 8869 24 9 1 chr3L 20332697 20333755 -4209802 - IDEFIX_I LTR Gypsy -4561 1067 1 3 740 26 0 0 0 chr3L 20334004 20334030 -4209527 + AT_rich Low_complexity Low_complexity 1 26 0 3 740 4963 22 5 5 chr3L 20334189 20334783 -4208774 - IDEFIX_LTR LTR Gypsy 0 594 1 3 740 247 143 0 0 chr3L 20334751 20334793 -4208764 + BARI1 DNA Tc1 3 44 -1706 3 740 360 228 43 99 chr3L 20334791 20335093 -4208464 + QUASIMODO_I LTR Gypsy 5611 5895 -165 3 740 430 132 0 42 chr3L 20335291 20335362 -4208195 + QUASIMODO_LTR LTR Gypsy 130 197 -461 3 740 356 132 101 109 chr3L 20335365 20335484 -4208073 + QUASIMODO_LTR LTR Gypsy 503 620 -38 3 740 336 185 0 61 chr3L 20337378 20337476 -4206081 + DNAREP1_DM LINE Penelope 241 332 -262 3 740 435 202 150 30 chr3L 20337528 20337661 -4205896 - DNAREP1_DM LINE Penelope -2 592 444 3 740 343 188 10 30 chr3L 20337718 20337817 -4205740 - DNAREP1_DM LINE Penelope -309 285 189 3 740 25 51 0 0 chr3L 20337881 20337920 -4205637 + AT_rich Low_complexity Low_complexity 1 39 0 3 740 207 69 0 0 chr3L 20342617 20342646 -4200911 + (GA)n Simple_repeat Simple_repeat 1 29 0 3 740 180 0 0 0 chr3L 20342646 20342666 -4200891 + (TGAG)n Simple_repeat Simple_repeat 2 21 0 3 740 239 298 0 0 chr3L 20345789 20345873 -4197684 + T-rich Low_complexity Low_complexity 1 84 0 3 740 842 99 92 0 chr3L 20358198 20358329 -4185228 + DMRP1 Unknown Unknown 2 144 -202 3 740 198 0 0 0 chr3L 20358329 20358351 -4185206 + (TC)n Simple_repeat Simple_repeat 2 23 0 3 740 892 64 0 0 chr3L 20358351 20358461 -4185096 + DMRP1 Unknown Unknown 190 299 -47 3 740 22 0 0 0 chr3L 20363148 20363170 -4180387 + AT_rich Low_complexity Low_complexity 1 22 0 3 740 21 36 0 0 chr3L 20369403 20369431 -4174126 + AT_rich Low_complexity Low_complexity 1 28 0 3 740 26 0 0 0 chr3L 20370395 20370421 -4173136 + AT_rich Low_complexity Low_complexity 1 26 0 3 740 22 0 0 0 chr3L 20377379 20377401 -4166156 + AT_rich Low_complexity Low_complexity 1 22 0 3 740 21 36 0 0 chr3L 20382516 20382544 -4161013 + AT_rich Low_complexity Low_complexity 1 28 0 3 740 21 0 0 0 chr3L 20387249 20387270 -4156287 + AT_rich Low_complexity Low_complexity 1 21 0 3 740 183 42 0 0 chr3L 20391050 20391074 -4152483 + (CCG)n Simple_repeat Simple_repeat 2 25 0 3 740 210 95 0 87 chr3L 20391075 20391121 -4152436 + (CACTC)n Simple_repeat Simple_repeat 3 44 0 3 740 191 88 29 0 chr3L 20391859 20391893 -4151664 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 740 236 265 0 20 chr3L 20393268 20393368 -4150189 + ROO_I LTR Pao 640 737 -7519 3 740 30 0 0 0 chr3L 20403015 20403045 -4140512 + AT_rich Low_complexity Low_complexity 1 30 0 3 740 25 0 0 0 chr3L 20406134 20406159 -4137398 + AT_rich Low_complexity Low_complexity 1 25 0 3 740 205 151 0 70 chr3L 20406520 20406577 -4136980 + T-rich Low_complexity Low_complexity 5 57 0 3 740 243 0 0 0 chr3L 20409327 20409354 -4134203 + (A)n Simple_repeat Simple_repeat 1 27 0 3 740 24 0 0 0 chr3L 20410056 20410080 -4133477 + AT_rich Low_complexity Low_complexity 1 24 0 3 740 26 30 0 0 chr3L 20417527 20417560 -4125997 + AT_rich Low_complexity Low_complexity 1 33 0 3 740 22 35 0 0 chr3L 20421236 20421265 -4122292 + AT_rich Low_complexity Low_complexity 1 29 0 3 740 27 0 0 0 chr3L 20424807 20424834 -4118723 + AT_rich Low_complexity Low_complexity 1 27 0 3 740 21 36 0 0 chr3L 20425372 20425400 -4118157 + AT_rich Low_complexity Low_complexity 1 28 0 3 740 22 0 0 0 chr3L 20429202 20429224 -4114333 + AT_rich Low_complexity Low_complexity 1 22 0 3 740 25 51 0 0 chr3L 20435243 20435282 -4108275 + AT_rich Low_complexity Low_complexity 1 39 0 3 740 255 31 0 0 chr3L 20436176 20436208 -4107349 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 740 24 0 0 0 chr3L 20438634 20438658 -4104899 + AT_rich Low_complexity Low_complexity 1 24 0 3 740 209 57 29 0 chr3L 20441343 20441378 -4102179 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 740 21 0 0 0 chr3L 20443769 20443790 -4099767 + AT_rich Low_complexity Low_complexity 1 21 0 3 740 218 153 16 48 chr3L 20446179 20446241 -4097316 + (TTATA)n Simple_repeat Simple_repeat 4 63 0 3 740 24 53 0 0 chr3L 20446253 20446291 -4097266 + AT_rich Low_complexity Low_complexity 1 38 0 3 741 24 0 0 0 chr3L 20447569 20447593 -4095964 + AT_rich Low_complexity Low_complexity 1 24 0 3 741 22 35 0 0 chr3L 20447790 20447819 -4095738 + AT_rich Low_complexity Low_complexity 1 29 0 3 741 22 35 0 0 chr3L 20452782 20452811 -4090746 + AT_rich Low_complexity Low_complexity 1 29 0 3 741 23 33 0 0 chr3L 20452963 20452993 -4090564 + AT_rich Low_complexity Low_complexity 1 30 0 3 741 37 76 0 0 chr3L 20453143 20453222 -4090335 + AT_rich Low_complexity Low_complexity 1 79 0 3 741 23 0 0 0 chr3L 20453294 20453317 -4090240 + AT_rich Low_complexity Low_complexity 1 23 0 3 741 233 139 0 0 chr3L 20456053 20456089 -4087468 - DNAREP1_DM LINE Penelope -535 59 24 3 741 193 85 85 0 chr3L 20458664 20458711 -4084846 + (TTATA)n Simple_repeat Simple_repeat 4 54 0 3 741 24 0 0 0 chr3L 20458937 20458961 -4084596 + AT_rich Low_complexity Low_complexity 1 24 0 3 741 25 51 0 0 chr3L 20463211 20463250 -4080307 + AT_rich Low_complexity Low_complexity 1 39 0 3 741 245 238 16 0 chr3L 20464074 20464137 -4079420 + (CTG)n Simple_repeat Simple_repeat 1 64 0 3 741 25 31 0 0 chr3L 20464285 20464317 -4079240 + AT_rich Low_complexity Low_complexity 1 32 0 3 741 189 0 0 0 chr3L 20465919 20465940 -4077617 + (TTG)n Simple_repeat Simple_repeat 1 21 0 3 741 33 0 0 0 chr3L 20466597 20466630 -4076927 + AT_rich Low_complexity Low_complexity 1 33 0 3 741 30 59 0 0 chr3L 20467818 20467869 -4075688 + AT_rich Low_complexity Low_complexity 1 51 0 3 741 2183 115 62 55 chr3L 20469907 20470311 -4073246 + Gypsy6_LTR LTR Gypsy 1 407 0 3 741 22924 231 21 23 chr3L 20470327 20477043 -4066514 + Gypsy6_I LTR Gypsy 27 7012 0 3 741 2183 113 57 62 chr3L 20477045 20477450 -4066107 + Gypsy6_LTR LTR Gypsy 1 403 -4 3 741 325 56 89 0 chr3L 20479329 20479419 -4064138 + (TA)n Simple_repeat Simple_repeat 2 99 0 3 741 231 61 0 0 chr3L 20479709 20479742 -4063815 + (TCTG)n Simple_repeat Simple_repeat 1 33 0 3 741 635 210 151 97 chr3L 20480795 20481001 -4062556 - DNAREP1_DM LINE Penelope 0 594 378 3 741 262 200 0 0 chr3L 20481005 20481055 -4062502 - DNAREP1_DM LINE Penelope -544 50 1 3 741 399 17 50 0 chr3L 20481634 20481694 -4061863 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 741 280 108 0 0 chr3L 20483408 20483445 -4060112 - DNAREP1_DM LINE Penelope -1 593 557 3 741 23 0 0 0 chr3L 20483815 20483838 -4059719 + AT_rich Low_complexity Low_complexity 1 23 0 3 741 180 179 0 0 chr3L 20485424 20485463 -4058094 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 741 31 44 0 0 chr3L 20485708 20485753 -4057804 + AT_rich Low_complexity Low_complexity 1 45 0 3 741 240 35 0 0 chr3L 20486447 20486476 -4057081 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 741 24 0 0 0 chr3L 20486760 20486784 -4056773 + AT_rich Low_complexity Low_complexity 1 24 0 3 741 27 0 0 0 chr3L 20490242 20490269 -4053288 + AT_rich Low_complexity Low_complexity 1 27 0 3 741 256 275 7 30 chr3L 20490969 20491104 -4052453 + GA-rich Low_complexity Low_complexity 2 133 0 3 741 24 0 0 0 chr3L 20491802 20491826 -4051731 + AT_rich Low_complexity Low_complexity 1 24 0 3 741 1427 159 86 24 chr3L 20491941 20492231 -4051326 - DMRP1 Unknown Unknown -11 335 28 3 741 285 263 40 0 chr3L 20492314 20492390 -4051167 - DNAREP1_DM LINE Penelope -515 79 1 3 741 2198 132 91 32 chr3L 20494660 20495331 -4048226 + DNAREP1_DM LINE Penelope 2 593 -1 3 741 294 204 42 31 chr3L 20495274 20495370 -4048187 - P_DG DNA P -75 2813 2717 3 741 431 165 192 80 chr3L 20495589 20495714 -4047843 - DNAREP1_DM LINE Penelope -104 490 352 3 741 491 253 24 54 chr3L 20495724 20495891 -4047666 - DNAREP1_DM LINE Penelope -432 162 1 3 741 784 233 66 20 chr3L 20496276 20496473 -4047084 - DNAREP1_DM LINE Penelope -113 481 276 3 741 388 192 0 0 chr3L 20496479 20496552 -4047005 - DNAREP1_DM LINE Penelope -507 87 15 3 741 23 33 0 0 chr3L 20498884 20498914 -4044643 + AT_rich Low_complexity Low_complexity 1 30 0 3 741 189 74 0 0 chr3L 20503816 20503843 -4039714 + (CAG)n Simple_repeat Simple_repeat 2 28 0 3 741 183 107 35 35 chr3L 20504160 20504218 -4039339 + A-rich Low_complexity Low_complexity 2 59 0 3 741 39 22 0 0 chr3L 20504480 20504526 -4039031 + AT_rich Low_complexity Low_complexity 1 46 0 3 741 25 51 0 0 chr3L 20507701 20507740 -4035817 + AT_rich Low_complexity Low_complexity 1 39 0 3 741 28 29 0 0 chr3L 20508114 20508149 -4035408 + AT_rich Low_complexity Low_complexity 1 35 0 3 741 26 30 0 0 chr3L 20510203 20510236 -4033321 + AT_rich Low_complexity Low_complexity 1 33 0 3 741 220 241 0 49 chr3L 20510542 20510603 -4032954 + A-rich Low_complexity Low_complexity 6 63 0 3 741 251 270 0 0 chr3L 20510630 20510704 -4032853 + CT-rich Low_complexity Low_complexity 2 75 0 3 741 317 75 19 0 chr3L 20515548 20515601 -4027956 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 741 209 146 0 77 chr3L 20515943 20515995 -4027562 + GA-rich Low_complexity Low_complexity 1 48 0 3 741 33 0 0 0 chr3L 20517810 20517843 -4025714 + AT_rich Low_complexity Low_complexity 1 33 0 3 741 35 0 0 0 chr3L 20518055 20518090 -4025467 + AT_rich Low_complexity Low_complexity 1 35 0 3 741 216 0 0 0 chr3L 20518327 20518351 -4025206 + (TATAA)n Simple_repeat Simple_repeat 4 27 0 3 741 21 0 0 0 chr3L 20521146 20521167 -4022390 + AT_rich Low_complexity Low_complexity 1 21 0 3 741 25 0 0 0 chr3L 20526399 20526424 -4017133 + AT_rich Low_complexity Low_complexity 1 25 0 3 741 919 125 41 127 chr3L 20528943 20529163 -4014394 - DNAREP1_DM LINE Penelope 0 594 394 3 741 389 94 15 45 chr3L 20529169 20529236 -4014321 - DNAREP1_DM LINE Penelope -529 65 1 3 741 180 97 0 0 chr3L 20529719 20529750 -4013807 + (A)n Simple_repeat Simple_repeat 1 31 0 3 741 24 77 0 0 chr3L 20535196 20535248 -4008309 + AT_rich Low_complexity Low_complexity 1 52 0 3 741 207 0 0 0 chr3L 20535513 20535536 -4008021 + (CACTC)n Simple_repeat Simple_repeat 2 24 0 3 741 22 0 0 0 chr3L 20535891 20535913 -4007644 + AT_rich Low_complexity Low_complexity 1 22 0 3 741 198 0 0 0 chr3L 20536097 20536119 -4007438 + (T)n Simple_repeat Simple_repeat 1 22 0 3 741 23 68 0 0 chr3L 20536604 20536648 -4006909 + AT_rich Low_complexity Low_complexity 1 44 0 3 741 22 56 0 0 chr3L 20537622 20537658 -4005899 + AT_rich Low_complexity Low_complexity 1 36 0 3 741 22 88 0 0 chr3L 20537756 20537813 -4005744 + AT_rich Low_complexity Low_complexity 1 57 0 3 741 24 53 0 0 chr3L 20538095 20538133 -4005424 + AT_rich Low_complexity Low_complexity 1 38 0 3 741 229 208 0 0 chr3L 20538438 20538491 -4005066 + A-rich Low_complexity Low_complexity 1 53 0 3 741 249 33 0 0 chr3L 20541208 20541238 -4002319 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 741 216 143 0 0 chr3L 20541509 20541551 -4002006 + (T)n Simple_repeat Simple_repeat 1 42 0 3 741 192 97 0 0 chr3L 20547608 20547639 -3995918 + (CATCC)n Simple_repeat Simple_repeat 5 35 0 3 741 23 0 0 0 chr3L 20548108 20548131 -3995426 + AT_rich Low_complexity Low_complexity 1 23 0 3 741 25 31 0 0 chr3L 20548565 20548597 -3994960 + AT_rich Low_complexity Low_complexity 1 32 0 3 741 21 0 0 0 chr3L 20550031 20550052 -3993505 + GC_rich Low_complexity Low_complexity 1 21 0 3 741 189 0 0 0 chr3L 20555373 20555394 -3988163 + (CTCG)n Simple_repeat Simple_repeat 3 23 0 3 741 198 0 0 0 chr3L 20555394 20555415 -3988142 + (TTGG)n Simple_repeat Simple_repeat 1 22 0 3 741 230 218 18 73 chr3L 20557349 20557458 -3986099 - ROO_I LTR Pao -7513 743 641 3 741 287 119 0 0 chr3L 20557807 20557849 -3985708 + DNAREP1_DM LINE Penelope 21 62 -532 3 741 27 49 0 0 chr3L 20560003 20560044 -3983513 + AT_rich Low_complexity Low_complexity 1 41 0 3 741 246 136 0 0 chr3L 20560377 20560421 -3983136 + (CGATG)n Simple_repeat Simple_repeat 2 45 0 3 741 293 222 0 36 chr3L 20561241 20561325 -3982232 + (CGGT)n Simple_repeat Simple_repeat 3 83 0 3 741 189 0 0 0 chr3L 20561462 20561483 -3982074 + (TATCG)n Simple_repeat Simple_repeat 1 21 0 3 741 186 43 0 0 chr3L 20564299 20564322 -3979235 + (GTTTG)n Simple_repeat Simple_repeat 5 27 0 3 741 22 56 0 0 chr3L 20564535 20564571 -3978986 + AT_rich Low_complexity Low_complexity 1 36 0 3 741 24 0 0 0 chr3L 20564781 20564805 -3978752 + AT_rich Low_complexity Low_complexity 1 24 0 3 741 36 40 0 0 chr3L 20565632 20565682 -3977875 + AT_rich Low_complexity Low_complexity 1 50 0 3 741 25 0 0 0 chr3L 20566768 20566793 -3976764 + AT_rich Low_complexity Low_complexity 1 25 0 3 741 22 80 0 0 chr3L 20567015 20567065 -3976492 + AT_rich Low_complexity Low_complexity 1 50 0 3 741 192 163 0 0 chr3L 20567612 20567655 -3975902 + (CAG)n Simple_repeat Simple_repeat 1 43 0 3 741 180 111 0 0 chr3L 20568128 20568155 -3975402 + (ATG)n Simple_repeat Simple_repeat 2 28 0 3 741 36 77 0 0 chr3L 20569197 20569275 -3974282 + AT_rich Low_complexity Low_complexity 1 78 0 3 741 26 0 0 0 chr3L 20572268 20572294 -3971263 + AT_rich Low_complexity Low_complexity 1 26 0 3 741 222 128 0 0 chr3L 20572608 20572647 -3970910 + (CATCT)n Simple_repeat Simple_repeat 3 41 0 3 741 28 29 0 0 chr3L 20573105 20573140 -3970417 + AT_rich Low_complexity Low_complexity 1 35 0 3 741 348 178 0 0 chr3L 20576961 20577034 -3966523 + (TGG)n Simple_repeat Simple_repeat 1 73 0 3 741 28 29 0 0 chr3L 20577159 20577194 -3966363 + AT_rich Low_complexity Low_complexity 1 35 0 3 741 31 76 0 0 chr3L 20577850 20577916 -3965641 + AT_rich Low_complexity Low_complexity 1 66 0 3 741 29 0 0 0 chr3L 20577927 20577956 -3965601 + AT_rich Low_complexity Low_complexity 1 29 0 3 742 257 187 13 0 chr3L 20578754 20578829 -3964728 + (CAGTT)n Simple_repeat Simple_repeat 1 76 0 3 742 186 94 0 86 chr3L 20579104 20579174 -3964383 + (TGG)n Simple_repeat Simple_repeat 2 65 0 3 742 219 36 0 0 chr3L 20579642 20579670 -3963887 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 3 742 279 0 0 0 chr3L 20580304 20580335 -3963222 + (GATTG)n Simple_repeat Simple_repeat 3 33 0 3 742 21 57 0 0 chr3L 20581249 20581284 -3962273 + AT_rich Low_complexity Low_complexity 1 35 0 3 742 232 259 0 0 chr3L 20581525 20581579 -3961978 + (TTG)n Simple_repeat Simple_repeat 1 54 0 3 742 183 225 0 0 chr3L 20582403 20582474 -3961083 + (CAG)n Simple_repeat Simple_repeat 3 73 0 3 742 4404 4 2 2 chr3L 20583218 20583700 -3959857 + DM412B_LTR LTR Gypsy 1 482 -89 3 742 246 62 0 0 chr3L 20586251 20586283 -3957274 + (AGTTG)n Simple_repeat Simple_repeat 1 32 0 3 742 404 37 19 0 chr3L 20587651 20587705 -3955852 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 3 742 25 0 0 0 chr3L 20588272 20588297 -3955260 + AT_rich Low_complexity Low_complexity 1 25 0 3 742 22 35 0 0 chr3L 20589329 20589358 -3954199 + AT_rich Low_complexity Low_complexity 1 29 0 3 742 237 209 0 0 chr3L 20589749 20589792 -3953765 + (TCCG)n Simple_repeat Simple_repeat 3 45 0 3 742 205 118 19 19 chr3L 20590759 20590811 -3952746 + T-rich Low_complexity Low_complexity 3 54 0 3 742 258 207 0 0 chr3L 20591390 20591448 -3952109 + (TTA)n Simple_repeat Simple_repeat 2 59 0 3 742 252 0 0 0 chr3L 20592410 20592438 -3951119 + (TCC)n Simple_repeat Simple_repeat 1 28 0 3 742 261 119 0 0 chr3L 20593686 20593728 -3949829 + (CTG)n Simple_repeat Simple_repeat 3 44 0 3 742 255 203 15 15 chr3L 20594162 20594227 -3949330 + A-rich Low_complexity Low_complexity 5 69 0 3 742 23 0 0 0 chr3L 20594602 20594625 -3948932 + AT_rich Low_complexity Low_complexity 1 23 0 3 742 21 0 0 0 chr3L 20597368 20597389 -3946168 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 29 0 0 0 chr3L 20598733 20598762 -3944795 + AT_rich Low_complexity Low_complexity 1 29 0 3 742 205 200 0 0 chr3L 20600800 20600840 -3942717 + (ATG)n Simple_repeat Simple_repeat 3 42 0 3 742 32 0 0 0 chr3L 20601533 20601565 -3941992 + AT_rich Low_complexity Low_complexity 1 32 0 3 742 214 169 15 15 chr3L 20601762 20601828 -3941729 + (TTG)n Simple_repeat Simple_repeat 1 66 0 3 742 257 233 32 32 chr3L 20604068 20604161 -3939396 + (TTTG)n Simple_repeat Simple_repeat 3 95 0 3 742 21 0 0 0 chr3L 20606083 20606104 -3937453 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 180 0 0 0 chr3L 20608020 20608040 -3935517 + (A)n Simple_repeat Simple_repeat 1 20 0 3 742 24 0 0 0 chr3L 20612018 20612042 -3931515 + AT_rich Low_complexity Low_complexity 1 24 0 3 742 29 0 0 0 chr3L 20614446 20614475 -3929082 + AT_rich Low_complexity Low_complexity 1 29 0 3 742 22 35 0 0 chr3L 20616825 20616854 -3926703 + AT_rich Low_complexity Low_complexity 1 29 0 3 742 22 0 0 0 chr3L 20617540 20617562 -3925995 + AT_rich Low_complexity Low_complexity 1 22 0 3 742 26 30 0 0 chr3L 20618434 20618467 -3925090 + AT_rich Low_complexity Low_complexity 1 33 0 3 742 24 67 0 0 chr3L 20619599 20619644 -3923913 + AT_rich Low_complexity Low_complexity 1 45 0 3 742 22 0 0 0 chr3L 20620874 20620896 -3922661 + AT_rich Low_complexity Low_complexity 1 22 0 3 742 201 121 0 0 chr3L 20630929 20630962 -3912595 + (CAG)n Simple_repeat Simple_repeat 3 35 0 3 742 21 36 0 0 chr3L 20634058 20634086 -3909471 + AT_rich Low_complexity Low_complexity 1 28 0 3 742 408 192 178 70 chr3L 20634152 20634309 -3909248 + DNAREP1_DM LINE Penelope 314 487 -107 3 742 37 0 0 0 chr3L 20635419 20635456 -3908101 + AT_rich Low_complexity Low_complexity 1 37 0 3 742 21 0 0 0 chr3L 20637961 20637982 -3905575 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 25 0 0 0 chr3L 20641461 20641486 -3902071 + AT_rich Low_complexity Low_complexity 1 25 0 3 742 266 77 58 0 chr3L 20644294 20644346 -3899211 + (GTATG)n Simple_repeat Simple_repeat 4 58 0 3 742 27 29 0 0 chr3L 20645672 20645706 -3897851 + AT_rich Low_complexity Low_complexity 1 34 0 3 742 21 36 0 0 chr3L 20652049 20652077 -3891480 + AT_rich Low_complexity Low_complexity 1 28 0 3 742 217 216 0 0 chr3L 20652101 20652152 -3891405 + CT-rich Low_complexity Low_complexity 1 51 0 3 742 983 126 172 6 chr3L 20652548 20652909 -3890648 + DNAREP1_DM LINE Penelope 41 594 0 3 742 29 47 0 0 chr3L 20661736 20661779 -3881778 + AT_rich Low_complexity Low_complexity 1 43 0 3 742 23 0 0 0 chr3L 20661915 20661938 -3881619 + AT_rich Low_complexity Low_complexity 1 23 0 3 742 183 146 0 0 chr3L 20664196 20664237 -3879320 + (A)n Simple_repeat Simple_repeat 1 41 0 3 742 212 233 0 0 chr3L 20665089 20665132 -3878425 + (TTCGG)n Simple_repeat Simple_repeat 2 44 0 3 742 21 36 0 0 chr3L 20667328 20667356 -3876201 + AT_rich Low_complexity Low_complexity 1 28 0 3 742 25 0 0 0 chr3L 20667791 20667816 -3875741 + AT_rich Low_complexity Low_complexity 1 25 0 3 742 180 0 0 0 chr3L 20671325 20671345 -3872212 + (CAGGG)n Simple_repeat Simple_repeat 5 24 0 3 742 201 292 31 10 chr3L 20675673 20675770 -3867787 + (CCCGAA)n Simple_repeat Simple_repeat 4 102 0 3 742 238 221 12 38 chr3L 20676595 20676675 -3866882 + ROO_I LTR Pao 657 734 -7522 3 742 189 0 0 0 chr3L 20686778 20686799 -3856758 + (CTG)n Simple_repeat Simple_repeat 1 21 0 3 742 39 0 0 0 chr3L 20689461 20689500 -3854057 + AT_rich Low_complexity Low_complexity 1 39 0 3 742 22 35 0 0 chr3L 20689537 20689566 -3853991 + AT_rich Low_complexity Low_complexity 1 29 0 3 742 21 0 0 0 chr3L 20696428 20696449 -3847108 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 206 260 13 40 chr3L 20698036 20698112 -3845445 + (CCCGAA)n Simple_repeat Simple_repeat 5 78 0 3 742 35 63 0 0 chr3L 20699421 20699484 -3844073 + AT_rich Low_complexity Low_complexity 1 63 0 3 742 24 0 0 0 chr3L 20700572 20700596 -3842961 + AT_rich Low_complexity Low_complexity 1 24 0 3 742 21 0 0 0 chr3L 20704634 20704655 -3838902 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 183 42 0 0 chr3L 20704934 20704958 -3838599 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 3 742 523 125 0 0 chr3L 20704958 20705037 -3838520 - BS LINE Jockey -27 5099 5021 3 742 228 167 212 0 chr3L 20705110 20705176 -3838381 - DNAREP1_DM LINE Penelope -41 553 474 3 742 2971 64 2 35 chr3L 20705236 20705639 -3837918 - BS3_DM LINE Jockey -2 1788 1399 3 742 1076 126 165 0 chr3L 20705656 20705862 -3837695 - DNAREP1_DM LINE Penelope 0 594 355 3 743 21 0 0 0 chr3L 20709603 20709624 -3833933 + AT_rich Low_complexity Low_complexity 1 21 0 3 743 22 0 0 0 chr3L 20710801 20710823 -3832734 + AT_rich Low_complexity Low_complexity 1 22 0 3 743 25 31 0 0 chr3L 20710977 20711009 -3832548 + AT_rich Low_complexity Low_complexity 1 32 0 3 743 219 125 0 0 chr3L 20711514 20711554 -3832003 + (A)n Simple_repeat Simple_repeat 1 40 0 3 743 27 0 0 0 chr3L 20712702 20712729 -3830828 + AT_rich Low_complexity Low_complexity 1 27 0 3 743 25 51 0 0 chr3L 20712768 20712807 -3830750 + AT_rich Low_complexity Low_complexity 1 39 0 3 743 201 74 0 0 chr3L 20715973 20716000 -3827557 + (CAT)n Simple_repeat Simple_repeat 2 28 0 3 743 387 60 0 0 chr3L 20717833 20717883 -3825674 + (CAGAC)n Simple_repeat Simple_repeat 2 51 0 3 743 31 82 0 0 chr3L 20718637 20718710 -3824847 + AT_rich Low_complexity Low_complexity 1 73 0 3 743 222 37 0 0 chr3L 20721368 20721395 -3822162 + (TCCG)n Simple_repeat Simple_repeat 2 28 0 3 743 24 0 0 0 chr3L 20722791 20722815 -3820742 + AT_rich Low_complexity Low_complexity 1 24 0 3 743 22 35 0 0 chr3L 20725564 20725593 -3817964 + AT_rich Low_complexity Low_complexity 1 29 0 3 743 302 109 0 35 chr3L 20727229 20727286 -3816271 + (CTG)n Simple_repeat Simple_repeat 1 55 0 3 743 201 176 0 0 chr3L 20730613 20730647 -3812910 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 743 22 0 0 0 chr3L 20730667 20730689 -3812868 + AT_rich Low_complexity Low_complexity 1 22 0 3 743 37 0 0 0 chr3L 20732601 20732638 -3810919 + AT_rich Low_complexity Low_complexity 1 37 0 3 743 200 195 0 0 chr3L 20733027 20733068 -3810489 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 3 743 180 77 0 0 chr3L 20733343 20733369 -3810188 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 743 225 0 0 0 chr3L 20733506 20733531 -3810026 + (T)n Simple_repeat Simple_repeat 1 25 0 3 743 23 54 0 0 chr3L 20737538 20737575 -3805982 + AT_rich Low_complexity Low_complexity 1 37 0 3 743 23 0 0 0 chr3L 20738282 20738305 -3805252 + AT_rich Low_complexity Low_complexity 1 23 0 3 743 239 163 41 0 chr3L 20740234 20740283 -3803274 - DM1731_LTR LTR Copia -209 127 77 3 743 201 139 0 0 chr3L 20741403 20741446 -3802111 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 743 26 30 0 0 chr3L 20743239 20743272 -3800285 + AT_rich Low_complexity Low_complexity 1 33 0 3 743 40 87 0 0 chr3L 20744211 20744314 -3799243 + AT_rich Low_complexity Low_complexity 1 103 0 3 743 26 50 0 0 chr3L 20744951 20744991 -3798566 + AT_rich Low_complexity Low_complexity 1 40 0 3 743 354 123 62 0 chr3L 20746643 20746708 -3796849 - DNAREP1_DM LINE Penelope -13 581 513 3 743 226 167 0 0 chr3L 20746719 20746755 -3796802 - DNAREP1_DM LINE Penelope -175 419 384 3 743 275 183 58 47 chr3L 20746780 20746866 -3796691 - DNAREP1_DM LINE Penelope -474 120 34 3 743 226 167 0 0 chr3L 20747240 20747276 -3796281 - DNAREP1_DM LINE Penelope -175 419 384 3 743 275 183 58 47 chr3L 20747301 20747387 -3796170 - DNAREP1_DM LINE Penelope -474 120 34 3 743 226 167 0 0 chr3L 20747762 20747798 -3795759 - DNAREP1_DM LINE Penelope -175 419 384 3 743 275 183 58 47 chr3L 20747823 20747909 -3795648 - DNAREP1_DM LINE Penelope -474 120 34 3 743 22 35 0 0 chr3L 20749020 20749049 -3794508 + AT_rich Low_complexity Low_complexity 1 29 0 3 743 232 97 0 0 chr3L 20749459 20749490 -3794067 - DNAREP1_DM LINE Penelope -105 489 459 3 743 30 27 0 0 chr3L 20749675 20749712 -3793845 + AT_rich Low_complexity Low_complexity 1 37 0 3 743 28 29 0 0 chr3L 20751564 20751599 -3791958 + AT_rich Low_complexity Low_complexity 1 35 0 3 743 192 216 0 0 chr3L 20754666 20754717 -3788840 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 743 216 67 0 0 chr3L 20756739 20756769 -3786788 + (T)n Simple_repeat Simple_repeat 1 30 0 3 743 331 239 0 0 chr3L 20757805 20757876 -3785681 + DNAREP1_DM LINE Penelope 524 594 0 3 743 21 0 0 0 chr3L 20758985 20759006 -3784551 + AT_rich Low_complexity Low_complexity 1 21 0 3 743 180 0 0 0 chr3L 20764395 20764415 -3779142 + (A)n Simple_repeat Simple_repeat 1 20 0 3 743 222 160 0 0 chr3L 20765773 20765823 -3777734 + A-rich Low_complexity Low_complexity 5 54 0 3 743 32 26 0 0 chr3L 20784274 20784313 -3759244 + AT_rich Low_complexity Low_complexity 1 39 0 3 743 23 54 0 0 chr3L 20788822 20788859 -3754698 + AT_rich Low_complexity Low_complexity 1 37 0 3 743 29 60 0 0 chr3L 20790208 20790258 -3753299 + AT_rich Low_complexity Low_complexity 1 50 0 3 743 33 25 0 0 chr3L 20791607 20791647 -3751910 + AT_rich Low_complexity Low_complexity 1 40 0 3 743 21 36 0 0 chr3L 20799790 20799818 -3743739 + AT_rich Low_complexity Low_complexity 1 28 0 3 743 23 54 0 0 chr3L 20800006 20800043 -3743514 + AT_rich Low_complexity Low_complexity 1 37 0 3 743 302 67 22 0 chr3L 20800185 20800230 -3743327 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 743 228 216 0 0 chr3L 20801761 20801812 -3741745 - ROO_I LTR Pao -7529 727 677 3 743 21 57 0 0 chr3L 20811032 20811067 -3732490 + AT_rich Low_complexity Low_complexity 1 35 0 3 743 252 128 170 0 chr3L 20811328 20811375 -3732182 - DNAREP1_DM LINE Penelope -112 482 428 3 743 303 200 43 0 chr3L 20811399 20811469 -3732088 - DNAREP1_DM LINE Penelope -521 73 1 3 743 23 0 0 0 chr3L 20812829 20812852 -3730705 + AT_rich Low_complexity Low_complexity 1 23 0 3 743 24 32 0 0 chr3L 20812948 20812979 -3730578 + AT_rich Low_complexity Low_complexity 1 31 0 3 743 13313 126 230 30 chr3L 20814432 20817839 -3725718 - FB4_DM DNA Tc1 0 4089 1 3 743 27 62 0 0 chr3L 20821663 20821711 -3721846 + AT_rich Low_complexity Low_complexity 1 48 0 3 743 378 91 0 18 chr3L 20823433 20823489 -3720068 - DNAREP1_DM LINE Penelope -539 55 1 3 743 256 247 11 21 chr3L 20827191 20827286 -3716271 + (CAA)n Simple_repeat Simple_repeat 1 94 0 3 743 21 36 0 0 chr3L 20827975 20828003 -3715554 + AT_rich Low_complexity Low_complexity 1 28 0 3 743 27 0 0 0 chr3L 20833145 20833172 -3710385 + AT_rich Low_complexity Low_complexity 1 27 0 3 743 23 54 0 0 chr3L 20834907 20834944 -3708613 + AT_rich Low_complexity Low_complexity 1 37 0 3 743 268 83 0 40 chr3L 20837767 20837817 -3705740 + (ATTTG)n Simple_repeat Simple_repeat 2 49 0 3 744 208 253 12 48 chr3L 20841627 20841710 -3701847 + GA-rich Low_complexity Low_complexity 5 84 0 3 744 776 152 209 0 chr3L 20846113 20846290 -3697267 - DNAREP1_DM LINE Penelope 0 594 381 3 744 205 203 17 0 chr3L 20847438 20847497 -3696060 + (TAA)n Simple_repeat Simple_repeat 1 60 0 3 744 303 140 0 0 chr3L 20847880 20847930 -3695627 + (CTG)n Simple_repeat Simple_repeat 1 50 0 3 744 201 74 0 0 chr3L 20849669 20849696 -3693861 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 744 21 0 0 0 chr3L 20850117 20850138 -3693419 + AT_rich Low_complexity Low_complexity 1 21 0 3 744 23 54 0 0 chr3L 20851114 20851151 -3692406 + AT_rich Low_complexity Low_complexity 1 37 0 3 744 307 160 387 0 chr3L 20851391 20851497 -3692060 + DNAREP1_DM LINE Penelope 375 521 -73 3 744 303 238 0 0 chr3L 20853117 20853197 -3690360 - ROO_I LTR Pao -7524 732 653 3 744 25 31 0 0 chr3L 20858656 20858688 -3684869 + AT_rich Low_complexity Low_complexity 1 32 0 3 744 23 54 0 0 chr3L 20859730 20859767 -3683790 + AT_rich Low_complexity Low_complexity 1 37 0 3 744 192 97 0 0 chr3L 20860590 20860621 -3682936 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 744 200 295 0 0 chr3L 20862615 20862693 -3680864 + GA-rich Low_complexity Low_complexity 6 83 0 3 744 203 146 24 0 chr3L 20865015 20865056 -3678501 + (CAA)n Simple_repeat Simple_repeat 1 42 0 3 744 23 68 0 0 chr3L 20865794 20865838 -3677719 + AT_rich Low_complexity Low_complexity 1 44 0 3 744 27 29 0 0 chr3L 20868168 20868202 -3675355 + AT_rich Low_complexity Low_complexity 1 34 0 3 744 234 0 0 0 chr3L 20868202 20868228 -3675329 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 744 24 32 0 0 chr3L 20868809 20868840 -3674717 + AT_rich Low_complexity Low_complexity 1 31 0 3 744 24 77 0 0 chr3L 20871059 20871111 -3672446 + AT_rich Low_complexity Low_complexity 1 52 0 3 744 23 0 0 0 chr3L 20873512 20873535 -3670022 + AT_rich Low_complexity Low_complexity 1 23 0 3 744 202 135 0 26 chr3L 20877982 20878020 -3665537 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 744 24 53 0 0 chr3L 20878163 20878201 -3665356 + AT_rich Low_complexity Low_complexity 1 38 0 3 744 186 71 0 0 chr3L 20880536 20880564 -3662993 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 744 26 50 0 0 chr3L 20881322 20881362 -3662195 + AT_rich Low_complexity Low_complexity 1 40 0 3 744 195 42 0 0 chr3L 20883353 20883377 -3660180 + (CATA)n Simple_repeat Simple_repeat 3 26 0 3 744 25 0 0 0 chr3L 20885453 20885478 -3658079 + AT_rich Low_complexity Low_complexity 1 25 0 3 744 34 24 0 0 chr3L 20886862 20886903 -3656654 + AT_rich Low_complexity Low_complexity 1 41 0 3 744 2418 28 46 0 chr3L 20888397 20888682 -3654875 + Invader3_LTR LTR Gypsy 1 298 0 3 744 23 68 0 0 chr3L 20888828 20888872 -3654685 + AT_rich Low_complexity Low_complexity 1 44 0 3 744 411 218 33 42 chr3L 20888872 20889005 -3654552 - DNAREP1_DM LINE Penelope -106 488 372 3 744 444 37 0 0 chr3L 20892157 20892211 -3651346 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 744 22 0 0 0 chr3L 20893478 20893500 -3650057 + AT_rich Low_complexity Low_complexity 1 22 0 3 744 1238 102 66 10 chr3L 20898192 20898389 -3645168 + DNAREP1_DM LINE Penelope 6 213 -381 3 744 304 255 57 0 chr3L 20898392 20898414 -3645143 - P_DG DNA P -26 2862 2755 3 744 509 150 0 0 chr3L 20898414 20898494 -3645063 + DNAREP1_DM LINE Penelope 515 594 0 3 744 180 0 0 0 chr3L 20899052 20899072 -3644485 + (GGA)n Simple_repeat Simple_repeat 1 20 0 3 744 363 348 0 0 chr3L 20899094 20899235 -3644322 + (CGG)n Simple_repeat Simple_repeat 2 142 0 3 744 27 0 0 0 chr3L 20900267 20900294 -3643263 + AT_rich Low_complexity Low_complexity 1 27 0 3 744 27 0 0 0 chr3L 20902443 20902470 -3641087 + AT_rich Low_complexity Low_complexity 1 27 0 3 744 220 27 54 0 chr3L 20907680 20907717 -3635840 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 744 255 227 27 0 chr3L 20908811 20908886 -3634671 + (CTG)n Simple_repeat Simple_repeat 3 79 0 3 744 27 0 0 0 chr3L 20917598 20917625 -3625932 + AT_rich Low_complexity Low_complexity 1 27 0 3 744 23 0 0 0 chr3L 20919738 20919761 -3623796 + AT_rich Low_complexity Low_complexity 1 23 0 3 744 254 196 20 0 chr3L 20920548 20920599 -3622958 - ROO_I LTR Pao -7538 718 667 3 744 21 0 0 0 chr3L 20922911 20922932 -3620625 + AT_rich Low_complexity Low_complexity 1 21 0 3 744 32 0 0 0 chr3L 20923694 20923726 -3619831 + AT_rich Low_complexity Low_complexity 1 32 0 3 744 23 0 0 0 chr3L 20924979 20925002 -3618555 + AT_rich Low_complexity Low_complexity 1 23 0 3 744 37 52 0 0 chr3L 20925032 20925090 -3618467 + AT_rich Low_complexity Low_complexity 1 58 0 3 744 264 59 0 0 chr3L 20926852 20926886 -3616671 + (CAG)n Simple_repeat Simple_repeat 2 35 0 3 744 240 35 0 0 chr3L 20927620 20927649 -3615908 + (CATCC)n Simple_repeat Simple_repeat 5 33 0 3 744 270 0 0 0 chr3L 20928857 20928887 -3614670 + (CCG)n Simple_repeat Simple_repeat 2 31 0 3 744 186 43 0 0 chr3L 20929548 20929571 -3613986 + (T)n Simple_repeat Simple_repeat 1 23 0 3 744 25 0 0 0 chr3L 20929693 20929718 -3613839 + AT_rich Low_complexity Low_complexity 1 25 0 3 744 253 241 12 35 chr3L 20930791 20930877 -3612680 + (CTG)n Simple_repeat Simple_repeat 3 86 0 3 744 219 88 0 0 chr3L 20933146 20933180 -3610377 + (TTGG)n Simple_repeat Simple_repeat 4 37 0 3 744 251 253 92 0 chr3L 20935345 20935432 -3608125 + ROO_I LTR Pao 639 733 -7523 3 744 33 0 0 0 chr3L 20937109 20937142 -3606415 + AT_rich Low_complexity Low_complexity 1 33 0 3 744 228 67 0 0 chr3L 20939349 20939379 -3604178 + (CAA)n Simple_repeat Simple_repeat 3 32 0 3 744 198 0 0 0 chr3L 20939680 20939702 -3603855 + (CAT)n Simple_repeat Simple_repeat 1 22 0 3 744 21 0 0 0 chr3L 20940236 20940257 -3603300 + GC_rich Low_complexity Low_complexity 1 21 0 3 744 205 316 0 26 chr3L 20943663 20943741 -3599816 + (CATCC)n Simple_repeat Simple_repeat 3 78 0 3 744 23 33 0 0 chr3L 20944149 20944179 -3599378 + AT_rich Low_complexity Low_complexity 1 30 0 3 744 180 0 0 0 chr3L 20944415 20944435 -3599122 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 744 22 35 0 0 chr3L 20945917 20945946 -3597611 + AT_rich Low_complexity Low_complexity 1 29 0 3 744 26 0 0 0 chr3L 20950039 20950065 -3593492 + AT_rich Low_complexity Low_complexity 1 26 0 3 744 23 0 0 0 chr3L 20951535 20951558 -3591999 + AT_rich Low_complexity Low_complexity 1 23 0 3 744 21 0 0 0 chr3L 20963914 20963935 -3579622 + AT_rich Low_complexity Low_complexity 1 21 0 3 744 21 0 0 0 chr3L 20966207 20966228 -3577329 + AT_rich Low_complexity Low_complexity 1 21 0 3 744 210 246 0 0 chr3L 20967902 20967963 -3575594 + (TATAA)n Simple_repeat Simple_repeat 1 61 0 3 744 211 191 0 0 chr3L 20967905 20967947 -3575610 + (TAATG)n Simple_repeat Simple_repeat 3 44 0 3 744 45 0 0 0 chr3L 20970159 20970204 -3573353 + AT_rich Low_complexity Low_complexity 1 45 0 3 745 195 42 0 0 chr3L 20974625 20974649 -3568908 + (TAGG)n Simple_repeat Simple_repeat 1 24 0 3 745 204 135 0 0 chr3L 20975382 20975419 -3568138 + (CGGA)n Simple_repeat Simple_repeat 3 39 0 3 745 29 70 0 0 chr3L 20980210 20980267 -3563290 + AT_rich Low_complexity Low_complexity 1 57 0 3 745 27 0 0 0 chr3L 20980380 20980407 -3563150 + AT_rich Low_complexity Low_complexity 1 27 0 3 745 24 53 0 0 chr3L 20981175 20981213 -3562344 + AT_rich Low_complexity Low_complexity 1 38 0 3 745 22 35 0 0 chr3L 20983691 20983720 -3559837 + AT_rich Low_complexity Low_complexity 1 29 0 3 745 24 0 0 0 chr3L 20984629 20984653 -3558904 + AT_rich Low_complexity Low_complexity 1 24 0 3 745 464 226 80 164 chr3L 20985407 20985608 -3557949 - DNAREP1_DM LINE Penelope -29 565 382 3 745 23 33 0 0 chr3L 20986200 20986230 -3557327 + AT_rich Low_complexity Low_complexity 1 30 0 3 745 219 69 0 0 chr3L 20987657 20987686 -3555871 + (TCGGG)n Simple_repeat Simple_repeat 5 33 0 3 745 24 0 0 0 chr3L 20988370 20988394 -3555163 + AT_rich Low_complexity Low_complexity 1 24 0 3 745 218 248 13 13 chr3L 20993106 20993265 -3550292 + (CTG)n Simple_repeat Simple_repeat 1 159 0 3 745 233 321 0 0 chr3L 20993562 20993643 -3549914 + (TGG)n Simple_repeat Simple_repeat 3 83 0 3 745 24 0 0 0 chr3L 20995445 20995469 -3548088 + AT_rich Low_complexity Low_complexity 1 24 0 3 745 213 163 0 0 chr3L 20997067 20997116 -3546441 + (CTG)n Simple_repeat Simple_repeat 1 49 0 3 745 309 118 0 0 chr3L 20997120 20997171 -3546386 + (CGA)n Simple_repeat Simple_repeat 2 52 0 3 745 242 170 0 19 chr3L 20997223 20997277 -3546280 - ROO_I LTR Pao -7525 731 679 3 745 219 36 0 0 chr3L 20997720 20997748 -3545809 + (A)n Simple_repeat Simple_repeat 1 28 0 3 745 27 49 0 0 chr3L 20999904 20999945 -3543612 + AT_rich Low_complexity Low_complexity 1 41 0 3 745 33 56 0 0 chr3L 21003689 21003743 -3539814 + AT_rich Low_complexity Low_complexity 1 54 0 3 745 22 35 0 0 chr3L 21004481 21004510 -3539047 + AT_rich Low_complexity Low_complexity 1 29 0 3 745 3790 5 0 0 chr3L 21008069 21008486 -3535071 + TIRANT_LTR LTR Gypsy 1 417 0 3 745 68237 2 0 1 chr3L 21008486 21016076 -3527481 + TIRANT_I LTR Gypsy 1 7692 0 3 745 3790 5 0 0 chr3L 21016076 21016493 -3527064 + TIRANT_LTR LTR Gypsy 1 417 0 3 745 22 0 0 0 chr3L 21019200 21019222 -3524335 + AT_rich Low_complexity Low_complexity 1 22 0 3 745 21 0 0 0 chr3L 21020211 21020232 -3523325 + AT_rich Low_complexity Low_complexity 1 21 0 3 745 28 61 0 0 chr3L 21024513 21024562 -3518995 + AT_rich Low_complexity Low_complexity 1 49 0 3 745 24 0 0 0 chr3L 21024729 21024753 -3518804 + AT_rich Low_complexity Low_complexity 1 24 0 3 745 225 0 0 0 chr3L 21032709 21032734 -3510823 + (A)n Simple_repeat Simple_repeat 1 25 0 3 745 27 0 0 0 chr3L 21033389 21033416 -3510141 + AT_rich Low_complexity Low_complexity 1 27 0 3 745 24 0 0 0 chr3L 21034348 21034372 -3509185 + AT_rich Low_complexity Low_complexity 1 24 0 3 745 31 26 0 0 chr3L 21034941 21034979 -3508578 + AT_rich Low_complexity Low_complexity 1 38 0 3 745 198 71 0 0 chr3L 21036170 21036198 -3507359 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 745 183 80 0 0 chr3L 21039016 21039041 -3504516 + (T)n Simple_repeat Simple_repeat 1 25 0 3 745 23 33 0 0 chr3L 21040206 21040236 -3503321 + AT_rich Low_complexity Low_complexity 1 30 0 3 745 288 53 0 0 chr3L 21041014 21041052 -3502505 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 745 207 0 0 0 chr3L 21042546 21042569 -3500988 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 745 180 77 0 0 chr3L 21042679 21042705 -3500852 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 745 30 59 0 0 chr3L 21045777 21045828 -3497729 + AT_rich Low_complexity Low_complexity 1 51 0 3 745 21 36 0 0 chr3L 21046395 21046423 -3497134 + AT_rich Low_complexity Low_complexity 1 28 0 3 745 22 56 0 0 chr3L 21047010 21047046 -3496511 + AT_rich Low_complexity Low_complexity 1 36 0 3 745 21 36 0 0 chr3L 21051255 21051283 -3492274 + AT_rich Low_complexity Low_complexity 1 28 0 3 745 21 0 0 0 chr3L 21052362 21052383 -3491174 + AT_rich Low_complexity Low_complexity 1 21 0 3 745 198 0 0 0 chr3L 21052611 21052633 -3490924 + (T)n Simple_repeat Simple_repeat 1 22 0 3 745 25 0 0 0 chr3L 21053979 21054004 -3489553 + AT_rich Low_complexity Low_complexity 1 25 0 3 745 308 231 0 0 chr3L 21054327 21054392 -3489165 + DNAREP1_DM LINE Penelope 1 65 -529 3 745 362 184 105 0 chr3L 21054506 21054582 -3488975 + DNAREP1_DM LINE Penelope 506 589 -5 3 745 207 0 0 0 chr3L 21057556 21057579 -3485978 + (CCA)n Simple_repeat Simple_repeat 1 23 0 3 745 37 52 0 0 chr3L 21058145 21058203 -3485354 + AT_rich Low_complexity Low_complexity 1 58 0 3 745 222 105 0 0 chr3L 21062048 21062086 -3481471 + (CAG)n Simple_repeat Simple_repeat 1 38 0 3 745 183 129 0 0 chr3L 21062266 21062297 -3481260 + (CAG)n Simple_repeat Simple_repeat 3 33 0 3 745 201 154 0 0 chr3L 21063991 21064030 -3479527 + (CAG)n Simple_repeat Simple_repeat 2 40 0 3 745 255 224 0 15 chr3L 21065773 21065841 -3477716 + (CAG)n Simple_repeat Simple_repeat 2 68 0 3 745 286 300 0 0 chr3L 21067624 21067694 -3475863 + (TTAGGC)n Simple_repeat Simple_repeat 3 72 0 3 745 186 133 0 0 chr3L 21069375 21069405 -3474152 + (CCG)n Simple_repeat Simple_repeat 2 31 0 3 745 26 0 0 0 chr3L 21075297 21075323 -3468234 + AT_rich Low_complexity Low_complexity 1 26 0 3 745 227 93 23 0 chr3L 21076286 21076329 -3467228 + (CAAAAA)n Simple_repeat Simple_repeat 5 48 0 3 745 23 33 0 0 chr3L 21077324 21077354 -3466203 + AT_rich Low_complexity Low_complexity 1 30 0 3 745 28 0 0 0 chr3L 21077941 21077969 -3465588 + AT_rich Low_complexity Low_complexity 1 28 0 3 745 29 28 0 0 chr3L 21078905 21078941 -3464616 + AT_rich Low_complexity Low_complexity 1 36 0 3 745 386 94 16 0 chr3L 21084243 21084307 -3459250 + (CTG)n Simple_repeat Simple_repeat 1 65 0 3 745 23 54 0 0 chr3L 21085097 21085134 -3458423 + AT_rich Low_complexity Low_complexity 1 37 0 3 745 207 0 0 0 chr3L 21086522 21086545 -3457012 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 3 745 25 0 0 0 chr3L 21090703 21090728 -3452829 + AT_rich Low_complexity Low_complexity 1 25 0 3 745 24 0 0 0 chr3L 21093725 21093749 -3449808 + AT_rich Low_complexity Low_complexity 1 24 0 3 745 217 267 0 0 chr3L 21095940 21096000 -3447557 + (TGGA)n Simple_repeat Simple_repeat 1 60 0 3 745 23 0 0 0 chr3L 21098489 21098512 -3445045 + AT_rich Low_complexity Low_complexity 1 23 0 3 745 48 53 0 0 chr3L 21101697 21101773 -3441784 + AT_rich Low_complexity Low_complexity 1 76 0 3 746 53 17 0 0 chr3L 21102603 21102663 -3440894 + AT_rich Low_complexity Low_complexity 1 60 0 3 746 237 65 0 0 chr3L 21103020 21103051 -3440506 + (CAA)n Simple_repeat Simple_repeat 1 31 0 3 746 198 0 0 0 chr3L 21111831 21111853 -3431704 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 746 23 0 0 0 chr3L 21112858 21112881 -3430676 + AT_rich Low_complexity Low_complexity 1 23 0 3 746 252 59 0 0 chr3L 21113780 21113814 -3429743 + (T)n Simple_repeat Simple_repeat 1 34 0 3 746 21 71 0 0 chr3L 21114580 21114622 -3428935 + AT_rich Low_complexity Low_complexity 1 42 0 3 746 21 36 0 0 chr3L 21115751 21115779 -3427778 + AT_rich Low_complexity Low_complexity 1 28 0 3 746 21 82 0 0 chr3L 21116897 21116946 -3426611 + AT_rich Low_complexity Low_complexity 1 49 0 3 746 220 213 0 0 chr3L 21117504 21117551 -3426006 + (CAA)n Simple_repeat Simple_repeat 2 48 0 3 746 217 318 12 12 chr3L 21117637 21117723 -3425834 + (CGGA)n Simple_repeat Simple_repeat 4 89 0 3 746 22 0 0 0 chr3L 21118016 21118038 -3425519 + AT_rich Low_complexity Low_complexity 1 22 0 3 746 28 29 0 0 chr3L 21120457 21120492 -3423065 + AT_rich Low_complexity Low_complexity 1 35 0 3 746 21 0 0 0 chr3L 21121177 21121198 -3422359 + AT_rich Low_complexity Low_complexity 1 21 0 3 746 24 0 0 0 chr3L 21121271 21121295 -3422262 + AT_rich Low_complexity Low_complexity 1 24 0 3 746 30 77 0 0 chr3L 21121403 21121468 -3422089 + AT_rich Low_complexity Low_complexity 1 65 0 3 746 22 0 0 0 chr3L 21123283 21123305 -3420252 + AT_rich Low_complexity Low_complexity 1 22 0 3 746 21 36 0 0 chr3L 21125510 21125538 -3418019 + AT_rich Low_complexity Low_complexity 1 28 0 3 746 24 32 0 0 chr3L 21126374 21126405 -3417152 + AT_rich Low_complexity Low_complexity 1 31 0 3 746 316 146 163 47 chr3L 21136443 21136529 -3407028 + DNAREP1_DM LINE Penelope 2 97 -497 3 746 205 51 51 0 chr3L 21136600 21136639 -3406918 + (TAA)n Simple_repeat Simple_repeat 2 42 0 3 746 182 62 31 0 chr3L 21137698 21137730 -3405827 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 3 746 1070 123 165 9 chr3L 21138541 21138771 -3404786 - DNAREP1_DM LINE Penelope -327 267 2 3 746 182 37 0 36 chr3L 21141461 21141489 -3402068 + (TATAA)n Simple_repeat Simple_repeat 1 27 0 3 746 24 32 0 0 chr3L 21142624 21142655 -3400902 + AT_rich Low_complexity Low_complexity 1 31 0 3 746 240 100 0 0 chr3L 21144825 21144865 -3398692 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 746 2246 15 11 11 chr3L 21145018 21145293 -3398264 + BLASTOPIA_LTR LTR Gypsy 1 275 0 3 746 41545 1 1 0 chr3L 21145293 21149770 -3393787 + BLASTOPIA_I LTR Gypsy 1 4481 0 3 746 2246 15 11 11 chr3L 21149770 21150045 -3393512 + BLASTOPIA_LTR LTR Gypsy 1 275 0 3 746 382 195 0 0 chr3L 21150137 21150214 -3393343 - DNAREP1_DM LINE Penelope -22 572 496 3 746 389 227 11 0 chr3L 21150271 21150359 -3393198 - DNAREP1_DM LINE Penelope -505 89 1 3 746 24 0 0 0 chr3L 21157643 21157667 -3385890 + AT_rich Low_complexity Low_complexity 1 24 0 3 746 24 53 0 0 chr3L 21158648 21158686 -3384871 + AT_rich Low_complexity Low_complexity 1 38 0 3 746 39 60 0 0 chr3L 21159907 21159974 -3383583 + AT_rich Low_complexity Low_complexity 1 67 0 3 746 21 0 0 0 chr3L 21162792 21162813 -3380744 + AT_rich Low_complexity Low_complexity 1 21 0 3 746 21 0 0 0 chr3L 21163977 21163998 -3379559 + AT_rich Low_complexity Low_complexity 1 21 0 3 746 23 0 0 0 chr3L 21164113 21164136 -3379421 + AT_rich Low_complexity Low_complexity 1 23 0 3 746 25 0 0 0 chr3L 21165431 21165456 -3378101 + AT_rich Low_complexity Low_complexity 1 25 0 3 746 507 95 0 0 chr3L 21168117 21168191 -3375366 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 746 30 0 0 0 chr3L 21168424 21168454 -3375103 + AT_rich Low_complexity Low_complexity 1 30 0 3 746 207 100 0 0 chr3L 21169574 21169604 -3373953 + (GAA)n Simple_repeat Simple_repeat 2 31 0 3 746 28 61 0 0 chr3L 21175810 21175859 -3367698 + AT_rich Low_complexity Low_complexity 1 49 0 3 746 25 0 0 0 chr3L 21176326 21176351 -3367206 + AT_rich Low_complexity Low_complexity 1 25 0 3 746 256 242 0 0 chr3L 21176956 21177022 -3366535 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 746 21 0 0 0 chr3L 21177138 21177159 -3366398 + AT_rich Low_complexity Low_complexity 1 21 0 3 746 33 66 0 0 chr3L 21178172 21178233 -3365324 + AT_rich Low_complexity Low_complexity 1 61 0 3 746 325 113 0 0 chr3L 21178445 21178498 -3365059 - ROO_I LTR Pao -7542 714 662 3 746 29 70 0 0 chr3L 21181471 21181528 -3362029 + AT_rich Low_complexity Low_complexity 1 57 0 3 746 24 32 0 0 chr3L 21183452 21183483 -3360074 + AT_rich Low_complexity Low_complexity 1 31 0 3 746 261 254 14 0 chr3L 21183955 21184026 -3359531 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 746 23 33 0 0 chr3L 21184314 21184344 -3359213 + AT_rich Low_complexity Low_complexity 1 30 0 3 746 219 69 0 0 chr3L 21184825 21184854 -3358703 + (ATG)n Simple_repeat Simple_repeat 1 29 0 3 746 210 118 0 0 chr3L 21185180 21185214 -3358343 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 746 261 119 0 0 chr3L 21185344 21185386 -3358171 + (CAG)n Simple_repeat Simple_repeat 1 42 0 3 746 22 0 0 0 chr3L 21190788 21190810 -3352747 + AT_rich Low_complexity Low_complexity 1 22 0 3 746 389 191 95 0 chr3L 21192597 21192681 -3350876 + DNAREP1_DM LINE Penelope 431 522 -72 3 746 24 32 0 0 chr3L 21193994 21194025 -3349532 + AT_rich Low_complexity Low_complexity 1 31 0 3 746 203 209 0 23 chr3L 21194425 21194469 -3349088 + (ATG)n Simple_repeat Simple_repeat 3 45 0 3 746 180 0 0 0 chr3L 21194506 21194526 -3349031 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 746 22 0 0 0 chr3L 21195132 21195154 -3348403 + AT_rich Low_complexity Low_complexity 1 22 0 3 746 214 195 0 0 chr3L 21195755 21195796 -3347761 + (TTG)n Simple_repeat Simple_repeat 3 43 0 3 746 201 39 0 0 chr3L 21196053 21196079 -3347478 + (TC)n Simple_repeat Simple_repeat 2 27 0 3 746 25 0 0 0 chr3L 21196758 21196783 -3346774 + AT_rich Low_complexity Low_complexity 1 25 0 3 746 323 275 67 0 chr3L 21199750 21199870 -3343687 + DNAREP1_DM LINE Penelope 2 129 -465 3 746 836 192 95 57 chr3L 21199924 21200134 -3343423 + DNAREP1_DM LINE Penelope 371 588 -6 3 746 30 27 0 0 chr3L 21200154 21200191 -3343366 + AT_rich Low_complexity Low_complexity 1 37 0 3 746 23 0 0 0 chr3L 21200385 21200408 -3343149 + AT_rich Low_complexity Low_complexity 1 23 0 3 746 21 57 0 0 chr3L 21201237 21201272 -3342285 + AT_rich Low_complexity Low_complexity 1 35 0 3 746 40 37 0 0 chr3L 21202814 21202868 -3340689 + AT_rich Low_complexity Low_complexity 1 54 0 3 746 27 0 0 0 chr3L 21204455 21204482 -3339075 + AT_rich Low_complexity Low_complexity 1 27 0 3 746 21 0 0 0 chr3L 21205845 21205866 -3337691 + AT_rich Low_complexity Low_complexity 1 21 0 3 746 25 65 0 0 chr3L 21208392 21208438 -3335119 + AT_rich Low_complexity Low_complexity 1 46 0 3 746 243 0 0 0 chr3L 21209055 21209082 -3334475 + (A)n Simple_repeat Simple_repeat 1 27 0 3 746 22 35 0 0 chr3L 21210625 21210654 -3332903 + AT_rich Low_complexity Low_complexity 1 29 0 3 746 49 71 0 0 chr3L 21212981 21213079 -3330478 + AT_rich Low_complexity Low_complexity 1 98 0 3 746 229 179 18 0 chr3L 21214228 21214284 -3329273 - ROO_I LTR Pao -7535 721 665 3 746 23 78 0 0 chr3L 21215830 21215881 -3327676 + AT_rich Low_complexity Low_complexity 1 51 0 3 746 24 32 0 0 chr3L 21215938 21215969 -3327588 + AT_rich Low_complexity Low_complexity 1 31 0 3 746 268 222 0 0 chr3L 21216876 21216930 -3326627 - DNAREP1_DM LINE Penelope -104 490 437 3 746 32 43 0 0 chr3L 21217017 21217063 -3326494 + AT_rich Low_complexity Low_complexity 1 46 0 3 746 212 189 0 0 chr3L 21217742 21217779 -3325778 + (TTG)n Simple_repeat Simple_repeat 3 39 0 3 746 483 300 6 0 chr3L 21219236 21219396 -3324161 + (CTG)n Simple_repeat Simple_repeat 1 161 0 3 746 258 225 0 0 chr3L 21220734 21220814 -3322743 + GA-rich Low_complexity Low_complexity 2 81 0 3 746 201 231 0 0 chr3L 21220933 21220985 -3322572 + (CAG)n Simple_repeat Simple_repeat 2 53 0 3 746 238 186 11 44 chr3L 21221102 21221192 -3322365 + ROO_I LTR Pao 658 744 -7512 3 746 198 150 0 0 chr3L 21221402 21221442 -3322115 + (CAG)n Simple_repeat Simple_repeat 1 40 0 3 746 26 30 0 0 chr3L 21222078 21222111 -3321446 + AT_rich Low_complexity Low_complexity 1 33 0 3 746 34 55 0 0 chr3L 21222170 21222225 -3321332 + AT_rich Low_complexity Low_complexity 1 55 0 3 746 279 79 0 0 chr3L 21222639 21222677 -3320880 + (CAGC)n Simple_repeat Simple_repeat 4 41 0 3 746 292 179 0 104 chr3L 21224013 21224119 -3319438 + ROO_I LTR Pao 643 737 -7519 3 746 248 206 0 40 chr3L 21225253 21225329 -3318228 + ROO_I LTR Pao 659 731 -7525 3 746 234 250 18 0 chr3L 21225443 21225499 -3318058 + (CTG)n Simple_repeat Simple_repeat 3 59 0 3 746 215 214 0 0 chr3L 21226671 21226713 -3316844 + (CAG)n Simple_repeat Simple_repeat 3 44 0 3 746 231 88 0 0 chr3L 21227491 21227525 -3316032 + (CAA)n Simple_repeat Simple_repeat 1 34 0 3 746 347 167 13 0 chr3L 21230494 21230572 -3312985 + ROO_I LTR Pao 651 729 -7527 3 746 229 186 0 0 chr3L 21230694 21230737 -3312820 + (CTG)n Simple_repeat Simple_repeat 2 44 0 3 746 409 159 0 0 chr3L 21231000 21231069 -3312488 + DNAREP1_DM LINE Penelope 4 72 -522 3 746 605 173 6 33 chr3L 21231128 21231295 -3312262 + DNAREP1_DM LINE Penelope 389 594 0 3 746 285 29 0 0 chr3L 21231709 21231743 -3311814 + (GAGTG)n Simple_repeat Simple_repeat 5 38 0 3 746 23 0 0 0 chr3L 21232496 21232519 -3311038 + AT_rich Low_complexity Low_complexity 1 23 0 3 746 240 224 30 0 chr3L 21233015 21233082 -3310475 + ROO_I LTR Pao 665 733 -7523 3 747 24 53 0 0 chr3L 21233743 21233781 -3309776 + AT_rich Low_complexity Low_complexity 1 38 0 3 747 206 311 9 28 chr3L 21234438 21234544 -3309013 + (TATG)n Simple_repeat Simple_repeat 2 105 0 3 747 228 227 0 0 chr3L 21234501 21234545 -3309012 + (CATA)n Simple_repeat Simple_repeat 3 46 0 3 747 203 237 0 33 chr3L 21235259 21235320 -3308237 + A-rich Low_complexity Low_complexity 1 59 0 3 747 207 0 0 0 chr3L 21236753 21236776 -3306781 + (T)n Simple_repeat Simple_repeat 1 23 0 3 747 61856 2 1 10 chr3L 21236883 21244408 -3299149 + DM412 LTR Gypsy 1 6897 0 3 747 281 172 16 0 chr3L 21245621 21245685 -3297872 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 747 207 69 0 0 chr3L 21246661 21246690 -3296867 + (CGGA)n Simple_repeat Simple_repeat 4 32 0 3 747 211 222 0 0 chr3L 21247401 21247446 -3296111 + (CAA)n Simple_repeat Simple_repeat 1 45 0 3 747 186 43 0 0 chr3L 21248376 21248399 -3295158 + (GATTG)n Simple_repeat Simple_repeat 4 26 0 3 747 192 40 0 0 chr3L 21248399 21248424 -3295133 + (GCTG)n Simple_repeat Simple_repeat 3 27 0 3 747 195 42 0 0 chr3L 21248684 21248708 -3294849 + (TAGA)n Simple_repeat Simple_repeat 2 25 0 3 747 180 176 0 0 chr3L 21249881 21249915 -3293642 + (ATG)n Simple_repeat Simple_repeat 1 34 0 3 747 214 196 59 0 chr3L 21250263 21250314 -3293243 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 3 747 181 151 0 36 chr3L 21250642 21250697 -3292860 + (TTTCG)n Simple_repeat Simple_repeat 1 53 0 3 747 232 267 17 0 chr3L 21252111 21252171 -3291386 + (TTG)n Simple_repeat Simple_repeat 3 63 0 3 747 208 143 0 28 chr3L 21252616 21252652 -3290905 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 747 347 41 20 0 chr3L 21253245 21253294 -3290263 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 747 214 241 0 0 chr3L 21255140 21255194 -3288363 + (TCTG)n Simple_repeat Simple_repeat 4 57 0 3 747 356 184 0 88 chr3L 21256195 21256308 -3287249 + ROO_I LTR Pao 635 737 -7519 3 747 215 216 0 0 chr3L 21256423 21256460 -3287097 + (CAA)n Simple_repeat Simple_repeat 1 37 0 3 747 41 66 0 0 chr3L 21258992 21259068 -3284489 + AT_rich Low_complexity Low_complexity 1 76 0 3 747 180 0 0 0 chr3L 21259595 21259615 -3283942 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 747 195 204 0 0 chr3L 21263782 21263836 -3279721 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 747 258 289 99 26 chr3L 21268191 21268354 -3275203 + FW2_DM LINE Jockey 1769 1866 -2095 3 747 38 22 0 0 chr3L 21277670 21277715 -3265842 + AT_rich Low_complexity Low_complexity 1 45 0 3 747 201 94 0 0 chr3L 21280607 21280639 -3262918 + (CTG)n Simple_repeat Simple_repeat 3 34 0 3 747 39 0 0 0 chr3L 21284859 21284898 -3258659 + AT_rich Low_complexity Low_complexity 1 39 0 3 747 201 162 0 0 chr3L 21292205 21292242 -3251315 + A-rich Low_complexity Low_complexity 6 42 0 3 747 21 0 0 0 chr3L 21294896 21294917 -3248640 + AT_rich Low_complexity Low_complexity 1 21 0 3 747 22 0 0 0 chr3L 21297296 21297318 -3246239 + AT_rich Low_complexity Low_complexity 1 22 0 3 747 3990 2 0 0 chr3L 21299302 21299730 -3243827 + ROO_LTR LTR Pao 1 428 0 3 747 74388 1 3 2 chr3L 21299730 21307975 -3235582 + ROO_I LTR Pao 1 8256 0 3 747 3958 7 0 0 chr3L 21307975 21308403 -3235154 + ROO_LTR LTR Pao 1 428 0 3 747 24 0 0 0 chr3L 21309179 21309203 -3234354 + AT_rich Low_complexity Low_complexity 1 24 0 3 747 207 100 0 0 chr3L 21310267 21310297 -3233260 + (TGG)n Simple_repeat Simple_repeat 3 32 0 3 747 218 136 0 22 chr3L 21310673 21310718 -3232839 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 747 220 53 26 26 chr3L 21313329 21313368 -3230189 + (CCA)n Simple_repeat Simple_repeat 3 41 0 3 747 22 35 0 0 chr3L 21317514 21317543 -3226014 + AT_rich Low_complexity Low_complexity 1 29 0 3 747 25 0 0 0 chr3L 21319781 21319806 -3223751 + AT_rich Low_complexity Low_complexity 1 25 0 3 747 38 22 0 0 chr3L 21322412 21322457 -3221100 + AT_rich Low_complexity Low_complexity 1 45 0 3 747 198 150 0 0 chr3L 21323128 21323168 -3220389 + (TTG)n Simple_repeat Simple_repeat 3 42 0 3 747 225 280 27 0 chr3L 21323438 21323513 -3220044 - DNAREP1_DM LINE Penelope -150 444 368 3 747 21 0 0 0 chr3L 21325656 21325677 -3217880 + AT_rich Low_complexity Low_complexity 1 21 0 3 747 34 24 0 0 chr3L 21325827 21325868 -3217689 + AT_rich Low_complexity Low_complexity 1 41 0 3 747 273 98 0 0 chr3L 21327485 21327526 -3216031 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 747 227 234 15 15 chr3L 21329692 21329757 -3213800 + (ATG)n Simple_repeat Simple_repeat 3 67 0 3 747 242 204 0 0 chr3L 21337648 21337697 -3205860 + GA-rich Low_complexity Low_complexity 2 50 0 3 747 22 56 0 0 chr3L 21339219 21339255 -3204302 + AT_rich Low_complexity Low_complexity 1 36 0 3 747 233 226 19 0 chr3L 21340790 21340843 -3202714 + (TATG)n Simple_repeat Simple_repeat 3 56 0 3 747 214 143 19 58 chr3L 21342633 21342685 -3200872 + (CATAC)n Simple_repeat Simple_repeat 2 51 0 3 747 21 71 0 0 chr3L 21343060 21343102 -3200455 + AT_rich Low_complexity Low_complexity 1 42 0 3 747 217 314 0 0 chr3L 21346231 21346317 -3197240 + GA-rich Low_complexity Low_complexity 2 87 0 3 747 21 0 0 0 chr3L 21349080 21349101 -3194456 + AT_rich Low_complexity Low_complexity 1 21 0 3 747 34 0 0 0 chr3L 21349114 21349148 -3194409 + AT_rich Low_complexity Low_complexity 1 34 0 3 747 27 0 0 0 chr3L 21349752 21349779 -3193778 + AT_rich Low_complexity Low_complexity 1 27 0 3 747 612 177 73 0 chr3L 21350377 21350554 -3193003 - DNAREP1_DM LINE Penelope -33 561 323 3 747 327 226 75 11 chr3L 21350559 21350653 -3192904 - DNAREP1_DM LINE Penelope -493 101 2 3 747 23 33 0 0 chr3L 21353758 21353788 -3189769 + AT_rich Low_complexity Low_complexity 1 30 0 3 747 26 0 0 0 chr3L 21353926 21353952 -3189605 + AT_rich Low_complexity Low_complexity 1 26 0 3 747 25 0 0 0 chr3L 21354007 21354032 -3189525 + AT_rich Low_complexity Low_complexity 1 25 0 3 747 7845 23 0 0 chr3L 21354874 21355778 -3187779 + G2_DM LINE Jockey 2196 3099 -3 3 747 427 117 1087 0 chr3L 21356151 21356243 -3187314 - DNAREP1_DM LINE Penelope 0 594 532 3 747 1290 161 63 24 chr3L 21356243 21356530 -3187027 - DNAREP1_DM LINE Penelope -291 303 6 3 747 23 0 0 0 chr3L 21356536 21356559 -3186998 + AT_rich Low_complexity Low_complexity 1 23 0 3 747 180 0 0 0 chr3L 21358985 21359005 -3184552 + (TTA)n Simple_repeat Simple_repeat 3 22 0 3 747 47190 1 0 0 chr3L 21359005 21364365 -3179192 - I_DM LINE I -774 5457 99 3 747 279 186 0 48 chr3L 21364387 21364449 -3179108 - DNAREP1_DM LINE Penelope -8 586 528 3 747 239 91 30 0 chr3L 21364500 21364533 -3179024 - DNAREP1_DM LINE Penelope -532 62 29 3 748 23 54 0 0 chr3L 21365636 21365673 -3177884 + AT_rich Low_complexity Low_complexity 1 37 0 3 748 605 185 43 61 chr3L 21366100 21366311 -3177246 + DMTOM1_LTR LTR Gypsy 284 488 -19 3 748 426 100 14 28 chr3L 21366302 21366374 -3177183 + DMTOM1_LTR LTR Gypsy 340 410 0 3 748 217 286 8 31 chr3L 21366624 21366754 -3176803 + (TAAA)n Simple_repeat Simple_repeat 2 128 0 3 748 11040 286 31 28 chr3L 21366961 21371484 -3172073 + ROVER-I_DM LTR Gypsy 218 5262 -1322 3 748 1115 146 0 5 chr3L 21371486 21371679 -3171878 + DM297_I LTR Gypsy 5490 5681 -486 3 748 866 126 0 53 chr3L 21371678 21371829 -3171728 + DM176_I LTR Gypsy 6278 6420 0 3 748 605 185 43 61 chr3L 21372052 21372263 -3171294 + DMTOM1_LTR LTR Gypsy 284 488 -19 3 748 426 100 14 28 chr3L 21372254 21372326 -3171231 + DMTOM1_LTR LTR Gypsy 340 410 0 3 748 25 65 0 0 chr3L 21375240 21375286 -3168271 + AT_rich Low_complexity Low_complexity 1 46 0 3 748 232 178 22 0 chr3L 21375471 21375516 -3168041 + CT-rich Low_complexity Low_complexity 2 47 0 3 748 234 91 0 0 chr3L 21376341 21376374 -3167183 + (CATATA)n Simple_repeat Simple_repeat 1 33 0 3 748 27 0 0 0 chr3L 21381542 21381569 -3161988 + AT_rich Low_complexity Low_complexity 1 27 0 3 748 23 0 0 0 chr3L 21381589 21381612 -3161945 + AT_rich Low_complexity Low_complexity 1 23 0 3 748 288 111 0 0 chr3L 21382859 21382904 -3160653 + (T)n Simple_repeat Simple_repeat 1 45 0 3 748 23 0 0 0 chr3L 21384620 21384643 -3158914 + AT_rich Low_complexity Low_complexity 1 23 0 3 748 237 135 0 86 chr3L 21392571 21392652 -3150905 + (TGG)n Simple_repeat Simple_repeat 2 75 0 3 748 180 0 0 0 chr3L 21395362 21395382 -3148175 + (TAATG)n Simple_repeat Simple_repeat 5 24 0 3 748 206 188 20 20 chr3L 21396280 21396329 -3147228 + (TTG)n Simple_repeat Simple_repeat 3 51 0 3 748 41 0 0 0 chr3L 21400144 21400185 -3143372 + AT_rich Low_complexity Low_complexity 1 41 0 3 748 315 0 0 0 chr3L 21400402 21400437 -3143120 + (CAA)n Simple_repeat Simple_repeat 2 36 0 3 748 189 154 0 0 chr3L 21400969 21401008 -3142549 + A-rich Low_complexity Low_complexity 2 40 0 3 748 1040 231 147 24 chr3L 21401025 21401406 -3142151 + DNAREP1_DM LINE Penelope 160 587 -7 3 748 33 0 0 0 chr3L 21403211 21403244 -3140313 + AT_rich Low_complexity Low_complexity 1 33 0 3 748 186 118 0 0 chr3L 21407674 21407708 -3135849 + (TTATA)n Simple_repeat Simple_repeat 4 37 0 3 748 243 158 0 0 chr3L 21419839 21419877 -3123680 + DNAREP1_DM LINE Penelope 6 43 -551 3 748 361 197 0 40 chr3L 21419885 21419959 -3123598 - DNAREP1_DM LINE Penelope -523 71 1 3 748 25 0 0 0 chr3L 21421856 21421881 -3121676 + AT_rich Low_complexity Low_complexity 1 25 0 3 748 266 177 0 0 chr3L 21428484 21428546 -3115011 + ROO_I LTR Pao 665 726 -7530 3 748 222 205 0 0 chr3L 21429342 21429425 -3114132 + (CAG)n Simple_repeat Simple_repeat 1 83 0 3 748 202 315 0 0 chr3L 21429778 21429870 -3113687 + GA-rich Low_complexity Low_complexity 3 94 0 3 748 221 244 12 35 chr3L 21430058 21430143 -3113414 + A-rich Low_complexity Low_complexity 3 85 0 3 748 244 312 11 0 chr3L 21431726 21431819 -3111738 + (TATG)n Simple_repeat Simple_repeat 3 96 0 3 748 3672 53 106 2 chr3L 21434664 21435219 -3108338 - TC1_DM DNA Tc1 -1053 613 1 3 748 274 180 0 0 chr3L 21435349 21435399 -3108158 - DNAREP1_DM LINE Penelope -179 415 366 3 748 23 33 0 0 chr3L 21437483 21437513 -3106044 + AT_rich Low_complexity Low_complexity 1 30 0 3 748 23 33 0 0 chr3L 21438669 21438699 -3104858 + AT_rich Low_complexity Low_complexity 1 30 0 3 748 25 0 0 0 chr3L 21440618 21440643 -3102914 + AT_rich Low_complexity Low_complexity 1 25 0 3 748 198 0 0 0 chr3L 21441125 21441147 -3102410 + (TATTG)n Simple_repeat Simple_repeat 2 23 0 3 748 23 33 0 0 chr3L 21441990 21442020 -3101537 + AT_rich Low_complexity Low_complexity 1 30 0 3 748 249 33 0 0 chr3L 21444935 21444965 -3098592 + (A)n Simple_repeat Simple_repeat 1 30 0 3 748 180 77 0 0 chr3L 21447176 21447202 -3096355 + (CGGA)n Simple_repeat Simple_repeat 2 27 0 3 748 286 195 329 0 chr3L 21451480 21451562 -3091995 + DNAREP1_DM LINE Penelope 384 492 -102 3 748 311 102 20 0 chr3L 21451574 21451623 -3091934 + DNAREP1_DM LINE Penelope 538 587 -7 3 748 27 29 0 0 chr3L 21453119 21453153 -3090404 + AT_rich Low_complexity Low_complexity 1 34 0 3 748 22 0 0 0 chr3L 21454543 21454565 -3088992 + AT_rich Low_complexity Low_complexity 1 22 0 3 748 234 105 0 0 chr3L 21456389 21456427 -3087130 + (CTG)n Simple_repeat Simple_repeat 1 38 0 3 748 237 33 0 0 chr3L 21457260 21457290 -3086267 + (CATA)n Simple_repeat Simple_repeat 3 32 0 3 748 240 309 0 12 chr3L 21458064 21458146 -3085411 + (TTG)n Simple_repeat Simple_repeat 1 81 0 3 748 231 196 0 0 chr3L 21461153 21461204 -3082353 + CT-rich Low_complexity Low_complexity 2 52 0 3 748 25 0 0 0 chr3L 21461686 21461711 -3081846 + AT_rich Low_complexity Low_complexity 1 25 0 3 748 180 111 0 0 chr3L 21464616 21464643 -3078914 + (CAT)n Simple_repeat Simple_repeat 1 27 0 3 748 303 104 0 0 chr3L 21465159 21465207 -3078350 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 748 22 35 0 0 chr3L 21465699 21465728 -3077829 + AT_rich Low_complexity Low_complexity 1 29 0 3 748 201 222 0 0 chr3L 21467908 21467944 -3075613 + (CCG)n Simple_repeat Simple_repeat 3 38 0 3 748 222 184 0 0 chr3L 21468086 21468124 -3075433 + (CCG)n Simple_repeat Simple_repeat 2 39 0 3 748 240 59 0 0 chr3L 21469467 21469501 -3074056 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 748 321 26 0 0 chr3L 21469818 21469856 -3073701 + (GA)n Simple_repeat Simple_repeat 2 39 0 3 748 264 158 0 0 chr3L 21470005 21470062 -3073495 + CT-rich Low_complexity Low_complexity 1 57 0 3 748 180 0 0 0 chr3L 21473700 21473720 -3069837 + (ATG)n Simple_repeat Simple_repeat 2 21 0 3 748 189 0 0 0 chr3L 21474769 21474790 -3068767 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 3 748 459 202 0 21 chr3L 21475910 21476006 -3067551 + DNAREP1_DM LINE Penelope 384 477 -117 3 748 303 36 17 51 chr3L 21476522 21476581 -3066976 + (TAA)n Simple_repeat Simple_repeat 1 57 0 3 748 805 162 297 38 chr3L 21477367 21477680 -3065877 - DNAREP1_DM LINE Penelope -20 574 181 3 748 4873 28 12 7 chr3L 21478301 21478886 -3064671 + DMCR1A LINE CR1 4 591 -3879 3 748 8830 28 22 0 chr3L 21478881 21479901 -3063656 + DMCR1A LINE CR1 1198 2240 -2230 3 748 17242 24 25 1 chr3L 21479900 21481905 -3061652 + DMCR1A LINE CR1 2419 4470 0 3 748 290 168 35 106 chr3L 21485380 21485493 -3058064 + DNAREP1_DM LINE Penelope 409 513 -81 3 748 22 0 0 0 chr3L 21486115 21486137 -3057420 + AT_rich Low_complexity Low_complexity 1 22 0 3 748 25 31 0 0 chr3L 21486964 21486996 -3056561 + AT_rich Low_complexity Low_complexity 1 32 0 3 748 25 31 0 0 chr3L 21487267 21487299 -3056258 + AT_rich Low_complexity Low_complexity 1 32 0 3 748 186 167 0 0 chr3L 21488533 21488569 -3054988 + (CTG)n Simple_repeat Simple_repeat 1 36 0 3 748 198 0 0 0 chr3L 21490165 21490187 -3053370 + (TAA)n Simple_repeat Simple_repeat 3 24 0 3 748 1071 0 0 0 chr3L 21491643 21491762 -3051795 + (CA)n Simple_repeat Simple_repeat 1 119 0 3 748 4187 15 0 0 chr3L 21491991 21492460 -3051097 + PROTOP_A DNA P 1 469 -636 3 748 9542 20 1 3 chr3L 21492460 21493567 -3049990 + PROTOP_A DNA P 1 1105 0 3 748 26 82 0 0 chr3L 21494044 21494105 -3049452 + AT_rich Low_complexity Low_complexity 1 61 0 3 748 276 213 89 51 chr3L 21494145 21494224 -3049333 + DNAREP1_DM LINE Penelope 281 362 -232 3 748 256 86 14 159 chr3L 21494295 21494364 -3049193 + PROTOP_A DNA P 509 567 -538 3 749 23 0 0 0 chr3L 21496242 21496265 -3047292 + AT_rich Low_complexity Low_complexity 1 23 0 3 749 25 51 0 0 chr3L 21509096 21509135 -3034422 + AT_rich Low_complexity Low_complexity 1 39 0 3 749 22 80 0 0 chr3L 21515167 21515217 -3028340 + AT_rich Low_complexity Low_complexity 1 50 0 3 749 21 0 0 0 chr3L 21515977 21515998 -3027559 + AT_rich Low_complexity Low_complexity 1 21 0 3 749 30 45 0 0 chr3L 21516098 21516142 -3027415 + AT_rich Low_complexity Low_complexity 1 44 0 3 749 23 0 0 0 chr3L 21519025 21519048 -3024509 + AT_rich Low_complexity Low_complexity 1 23 0 3 749 252 175 70 0 chr3L 21527059 21527116 -3016441 + DNAREP1_DM LINE Penelope 534 594 0 3 749 21 57 0 0 chr3L 21532748 21532783 -3010774 + AT_rich Low_complexity Low_complexity 1 35 0 3 749 229 304 0 0 chr3L 21533950 21534019 -3009538 + G5A_DM LINE Jockey 2125 2193 -648 3 749 230 195 0 0 chr3L 21534810 21534851 -3008706 - DNAREP1_DM LINE Penelope -524 70 30 3 749 22 35 0 0 chr3L 21534868 21534897 -3008660 + AT_rich Low_complexity Low_complexity 1 29 0 3 749 24 32 0 0 chr3L 21536224 21536255 -3007302 + AT_rich Low_complexity Low_complexity 1 31 0 3 749 23 33 0 0 chr3L 21536954 21536984 -3006573 + AT_rich Low_complexity Low_complexity 1 30 0 3 749 25 31 0 0 chr3L 21538930 21538962 -3004595 + AT_rich Low_complexity Low_complexity 1 32 0 3 749 22 35 0 0 chr3L 21540584 21540613 -3002944 + AT_rich Low_complexity Low_complexity 1 29 0 3 749 228 348 0 17 chr3L 21542445 21542626 -3000931 + (CTG)n Simple_repeat Simple_repeat 1 178 0 3 749 346 160 0 78 chr3L 21543011 21543126 -3000431 - ROO_I LTR Pao -7512 744 639 3 749 180 216 0 0 chr3L 21543345 21543396 -3000161 + (CTG)n Simple_repeat Simple_repeat 2 52 0 3 749 218 182 0 0 chr3L 21543911 21543955 -2999602 + CT-rich Low_complexity Low_complexity 2 45 0 3 749 23 33 0 0 chr3L 21547054 21547084 -2996473 + AT_rich Low_complexity Low_complexity 1 30 0 3 749 21 0 0 0 chr3L 21548433 21548454 -2995103 + AT_rich Low_complexity Low_complexity 1 21 0 3 749 23 54 0 0 chr3L 21548711 21548748 -2994809 + AT_rich Low_complexity Low_complexity 1 37 0 3 749 336 226 0 0 chr3L 21549897 21549990 -2993567 - ROO_I LTR Pao -7523 733 641 3 749 193 188 15 30 chr3L 21555334 21555400 -2988157 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 3 749 635 191 155 30 chr3L 21555453 21555653 -2987904 - DNAREP1_DM LINE Penelope 0 594 370 3 749 25 0 0 0 chr3L 21557677 21557702 -2985855 + AT_rich Low_complexity Low_complexity 1 25 0 3 749 248 67 0 0 chr3L 21560973 21561003 -2982554 + DNAREP1_DM LINE Penelope 444 473 -121 3 749 27 0 0 0 chr3L 21561084 21561111 -2982446 + AT_rich Low_complexity Low_complexity 1 27 0 3 749 232 288 0 0 chr3L 21561269 21561335 -2982222 + CT-rich Low_complexity Low_complexity 6 71 0 3 749 28 29 0 0 chr3L 21563619 21563654 -2979903 + AT_rich Low_complexity Low_complexity 1 35 0 3 749 213 119 0 0 chr3L 21566914 21566956 -2976601 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 749 197 33 33 0 chr3L 21569105 21569135 -2974422 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 3 749 25 0 0 0 chr3L 21570261 21570286 -2973271 + AT_rich Low_complexity Low_complexity 1 25 0 3 749 26 50 0 0 chr3L 21575286 21575326 -2968231 + AT_rich Low_complexity Low_complexity 1 40 0 3 749 23 54 0 0 chr3L 21577581 21577618 -2965939 + AT_rich Low_complexity Low_complexity 1 37 0 3 749 202 250 0 54 chr3L 21579234 21579327 -2964230 + (CTGGGG)n Simple_repeat Simple_repeat 1 88 0 3 749 195 100 0 0 chr3L 21579407 21579437 -2964120 + (CGGAG)n Simple_repeat Simple_repeat 1 30 0 3 749 521 199 0 29 chr3L 21581820 21581960 -2961597 + SAR_DM Satellite Satellite 494 629 -843 3 749 368 147 0 68 chr3L 21583661 21583734 -2959823 - DNAREP1_DM LINE Penelope 0 594 527 3 749 272 83 21 0 chr3L 21589503 21589551 -2954006 + (CGAT)n Simple_repeat Simple_repeat 2 50 0 3 749 192 40 0 0 chr3L 21589665 21589690 -2953867 + (CACTC)n Simple_repeat Simple_repeat 4 28 0 3 749 387 125 0 0 chr3L 21591837 21591909 -2951648 + (CAG)n Simple_repeat Simple_repeat 3 74 0 3 749 283 177 0 20 chr3L 21592021 21592119 -2951438 + (CCGAA)n Simple_repeat Simple_repeat 4 99 0 3 749 185 0 0 39 chr3L 21594204 21594230 -2949327 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 3 749 25 0 0 0 chr3L 21597104 21597129 -2946428 + AT_rich Low_complexity Low_complexity 1 25 0 3 749 25 31 0 0 chr3L 21598081 21598113 -2945444 + AT_rich Low_complexity Low_complexity 1 32 0 3 749 22 0 0 0 chr3L 21599780 21599802 -2943755 + AT_rich Low_complexity Low_complexity 1 22 0 3 749 288 130 0 0 chr3L 21601061 21601107 -2942450 + (TCCA)n Simple_repeat Simple_repeat 2 47 0 3 749 21 0 0 0 chr3L 21606129 21606150 -2937407 + AT_rich Low_complexity Low_complexity 1 21 0 3 749 274 154 379 68 chr3L 21606709 21606825 -2936732 + DNAREP1_DM LINE Penelope 418 569 -25 3 749 22 0 0 0 chr3L 21613354 21613376 -2930181 + AT_rich Low_complexity Low_complexity 1 22 0 3 749 21 82 0 0 chr3L 21613679 21613728 -2929829 + AT_rich Low_complexity Low_complexity 1 49 0 3 749 26 30 0 0 chr3L 21615758 21615791 -2927766 + AT_rich Low_complexity Low_complexity 1 33 0 3 749 24 32 0 0 chr3L 21616966 21616997 -2926560 + AT_rich Low_complexity Low_complexity 1 31 0 3 749 27 62 0 0 chr3L 21617035 21617083 -2926474 + AT_rich Low_complexity Low_complexity 1 48 0 3 749 40 37 0 0 chr3L 21617131 21617185 -2926372 + AT_rich Low_complexity Low_complexity 1 54 0 3 749 30 45 0 0 chr3L 21617453 21617497 -2926060 + AT_rich Low_complexity Low_complexity 1 44 0 3 749 185 0 40 0 chr3L 21617635 21617660 -2925897 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 3 749 25 0 0 0 chr3L 21618028 21618053 -2925504 + AT_rich Low_complexity Low_complexity 1 25 0 3 749 194 0 39 0 chr3L 21618249 21618275 -2925282 + (TATAA)n Simple_repeat Simple_repeat 3 29 0 3 749 305 270 0 35 chr3L 21622773 21622888 -2920669 + (CTG)n Simple_repeat Simple_repeat 2 112 0 3 750 22 0 0 0 chr3L 21627914 21627936 -2915621 + AT_rich Low_complexity Low_complexity 1 22 0 3 750 22 0 0 0 chr3L 21628909 21628931 -2914626 + AT_rich Low_complexity Low_complexity 1 22 0 3 750 24 53 0 0 chr3L 21629319 21629357 -2914200 + AT_rich Low_complexity Low_complexity 1 38 0 3 750 277 213 242 11 chr3L 21630523 21630618 -2912939 - DNAREP1_DM LINE Penelope -29 565 449 3 750 2386 7 0 0 chr3L 21630743 21631015 -2912542 - FW_DM LINE Jockey 0 4692 4421 3 750 292 143 0 0 chr3L 21631025 21631074 -2912483 - DMRP1 Unknown Unknown -56 290 242 3 750 490 157 12 0 chr3L 21631075 21631158 -2912399 - DMRP1 Unknown Unknown -259 87 4 3 750 189 0 0 0 chr3L 21634267 21634288 -2909269 + (CAG)n Simple_repeat Simple_repeat 1 21 0 3 750 189 0 0 0 chr3L 21639371 21639392 -2904165 + (A)n Simple_repeat Simple_repeat 1 21 0 3 750 22 0 0 0 chr3L 21639409 21639431 -2904126 + AT_rich Low_complexity Low_complexity 1 22 0 3 750 293 217 175 117 chr3L 21639725 21639845 -2903712 - DNAREP1_DM LINE Penelope -34 560 434 3 750 293 125 0 0 chr3L 21640022 21640062 -2903495 - DNAREP1_DM LINE Penelope -533 61 22 3 750 30 27 0 0 chr3L 21645847 21645884 -2897673 + AT_rich Low_complexity Low_complexity 1 37 0 3 750 233 224 0 0 chr3L 21648125 21648183 -2895374 + (CAT)n Simple_repeat Simple_repeat 1 58 0 3 750 33 25 0 0 chr3L 21651279 21651319 -2892238 + AT_rich Low_complexity Low_complexity 1 40 0 3 750 380 129 28 14 chr3L 21652770 21652841 -2890716 + DNAREP1_DM LINE Penelope 514 585 -9 3 750 251 225 118 59 chr3L 21655902 21655987 -2887570 - DNAREP1_DM LINE Penelope -141 453 364 3 750 245 319 0 0 chr3L 21660903 21660975 -2882582 + G-rich Low_complexity Low_complexity 5 76 0 3 750 211 163 20 20 chr3L 21661967 21662017 -2881540 + (ATTTG)n Simple_repeat Simple_repeat 2 51 0 3 750 240 100 0 0 chr3L 21662187 21662227 -2881330 + (ATG)n Simple_repeat Simple_repeat 1 40 0 3 750 213 139 0 0 chr3L 21662829 21662872 -2880685 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 750 230 213 59 118 chr3L 21664984 21665069 -2878488 + DNAREP1_DM LINE Penelope 375 454 -140 3 750 22 0 0 0 chr3L 21676175 21676197 -2867360 + AT_rich Low_complexity Low_complexity 1 22 0 3 750 23 0 0 0 chr3L 21678001 21678024 -2865533 + AT_rich Low_complexity Low_complexity 1 23 0 3 750 23 0 0 0 chr3L 21678058 21678081 -2865476 + AT_rich Low_complexity Low_complexity 1 23 0 3 750 30 0 0 0 chr3L 21678096 21678126 -2865431 + AT_rich Low_complexity Low_complexity 1 30 0 3 750 228 267 13 13 chr3L 21678804 21678880 -2864677 - ROO_I LTR Pao -7508 748 673 3 750 33 0 0 0 chr3L 21683623 21683656 -2859901 + AT_rich Low_complexity Low_complexity 1 33 0 3 750 218 217 0 21 chr3L 21684011 21684058 -2859499 + (ATG)n Simple_repeat Simple_repeat 1 46 0 3 750 25 0 0 0 chr3L 21684616 21684641 -2858916 + AT_rich Low_complexity Low_complexity 1 25 0 3 750 208 211 0 0 chr3L 21685435 21685473 -2858084 + (TGG)n Simple_repeat Simple_repeat 3 40 0 3 750 258 116 0 0 chr3L 21685724 21685767 -2857790 + (CATCC)n Simple_repeat Simple_repeat 2 44 0 3 750 234 128 0 0 chr3L 21687526 21687565 -2855992 + (TGG)n Simple_repeat Simple_repeat 3 41 0 3 750 180 0 0 0 chr3L 21688088 21688108 -2855449 + (ATG)n Simple_repeat Simple_repeat 1 20 0 3 750 243 254 0 0 chr3L 21689432 21689499 -2854058 + (TATATG)n Simple_repeat Simple_repeat 1 67 0 3 750 224 262 0 0 chr3L 21690892 21690953 -2852604 + (CATCC)n Simple_repeat Simple_repeat 5 65 0 3 750 204 227 0 0 chr3L 21692020 21692064 -2851493 + (CAT)n Simple_repeat Simple_repeat 1 44 0 3 750 225 154 0 0 chr3L 21695241 21695280 -2848277 + (GATTG)n Simple_repeat Simple_repeat 4 42 0 3 750 252 269 0 0 chr3L 21699005 21699072 -2844485 + (TGG)n Simple_repeat Simple_repeat 3 69 0 3 750 241 204 0 0 chr3L 21701955 21701999 -2841558 + DNAREP1_DM LINE Penelope 447 490 -104 3 750 243 103 0 0 chr3L 21703119 21703158 -2840399 + (CATCC)n Simple_repeat Simple_repeat 4 42 0 3 750 26 30 0 0 chr3L 21703397 21703430 -2840127 + AT_rich Low_complexity Low_complexity 1 33 0 3 750 22 35 0 0 chr3L 21705929 21705958 -2837599 + AT_rich Low_complexity Low_complexity 1 29 0 3 750 208 274 0 0 chr3L 21708867 21708918 -2834639 + (CAG)n Simple_repeat Simple_repeat 2 52 0 3 750 189 154 0 0 chr3L 21713616 21713655 -2829902 + (CAA)n Simple_repeat Simple_repeat 1 39 0 3 750 33 43 0 0 chr3L 21717168 21717215 -2826342 + AT_rich Low_complexity Low_complexity 1 47 0 3 750 54 49 0 0 chr3L 21719141 21719223 -2824334 + AT_rich Low_complexity Low_complexity 1 82 0 3 750 218 310 11 22 chr3L 21720097 21720186 -2823371 + (CAGAGA)n Simple_repeat Simple_repeat 4 91 0 3 750 23 0 0 0 chr3L 21723789 21723812 -2819745 + AT_rich Low_complexity Low_complexity 1 23 0 3 750 261 145 0 114 chr3L 21723933 21724003 -2819554 - PROTOP_B DNA P -611 542 481 3 750 1858 119 284 4 chr3L 21725210 21725674 -2817883 - DNAREP1_DM LINE Penelope 0 594 1 3 750 29 0 0 0 chr3L 21725917 21725946 -2817611 + AT_rich Low_complexity Low_complexity 1 29 0 3 750 27 29 0 0 chr3L 21728146 21728180 -2815377 + AT_rich Low_complexity Low_complexity 1 34 0 3 750 24 53 0 0 chr3L 21728653 21728691 -2814866 + AT_rich Low_complexity Low_complexity 1 38 0 3 750 510 221 184 0 chr3L 21728698 21728834 -2814723 + DNAREP1_DM LINE Penelope 432 592 -2 3 750 23 68 0 0 chr3L 21729245 21729289 -2814268 + AT_rich Low_complexity Low_complexity 1 44 0 3 750 684 237 21 36 chr3L 21730040 21730233 -2813324 + DNAREP1_DM LINE Penelope 2 191 -403 3 750 637 179 109 29 chr3L 21730315 21730453 -2813104 + DNAREP1_DM LINE Penelope 420 568 -26 3 750 21 0 0 0 chr3L 21731621 21731642 -2811915 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 28 0 0 0 chr3L 21733882 21733910 -2809647 + AT_rich Low_complexity Low_complexity 1 28 0 3 750 22 0 0 0 chr3L 21737794 21737816 -2805741 + AT_rich Low_complexity Low_complexity 1 22 0 3 750 200 185 19 0 chr3L 21742042 21742096 -2801461 + (TTG)n Simple_repeat Simple_repeat 3 57 0 3 750 21 0 0 0 chr3L 21742424 21742445 -2801112 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 359 17 0 159 chr3L 21742483 21742552 -2801005 - LINEJ1_DM LINE Jockey 0 5020 4963 3 750 43647 0 0 0 chr3L 21742542 21747264 -2796293 + DOC LINE Jockey 2 4722 -3 3 750 2778 0 0 3 chr3L 21747263 21747570 -2795987 - LINEJ1_DM LINE Jockey -40 4980 4675 3 750 29 28 0 0 chr3L 21749650 21749686 -2793871 + AT_rich Low_complexity Low_complexity 1 36 0 3 750 228 170 0 0 chr3L 21752280 21752333 -2791224 + (CCAA)n Simple_repeat Simple_repeat 2 54 0 3 750 185 0 40 0 chr3L 21755454 21755479 -2788078 + (CTG)n Simple_repeat Simple_repeat 2 27 0 3 750 33 0 0 0 chr3L 21756573 21756606 -2786951 + AT_rich Low_complexity Low_complexity 1 33 0 3 750 234 245 0 0 chr3L 21757468 21757521 -2786036 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 751 21 36 0 0 chr3L 21758964 21758992 -2784565 + AT_rich Low_complexity Low_complexity 1 28 0 3 751 1178 89 12 6 chr3L 21759522 21759692 -2783865 - Transib-N1_DM DNA Transib 0 514 344 3 751 25 0 0 0 chr3L 21759724 21759749 -2783808 + AT_rich Low_complexity Low_complexity 1 25 0 3 751 556 55 264 0 chr3L 21759810 21759901 -2783656 - Transib-N1_DM DNA Transib -399 115 1 3 751 623 72 126 0 chr3L 21761841 21761952 -2781605 + G2_DM LINE Jockey 2971 3095 -7 3 751 23 0 0 0 chr3L 21762005 21762028 -2781529 + AT_rich Low_complexity Low_complexity 1 23 0 3 751 197 151 0 19 chr3L 21763162 21763216 -2780341 + T-rich Low_complexity Low_complexity 2 54 0 3 751 26 0 0 0 chr3L 21763807 21763833 -2779724 + AT_rich Low_complexity Low_complexity 1 26 0 3 751 33 25 0 0 chr3L 21764187 21764227 -2779330 + AT_rich Low_complexity Low_complexity 1 40 0 3 751 34 42 0 0 chr3L 21765953 21766001 -2777556 + AT_rich Low_complexity Low_complexity 1 48 0 3 751 32 26 0 0 chr3L 21766407 21766446 -2777111 + AT_rich Low_complexity Low_complexity 1 39 0 3 751 25 31 0 0 chr3L 21769857 21769889 -2773668 + AT_rich Low_complexity Low_complexity 1 32 0 3 751 21 0 0 0 chr3L 21771474 21771495 -2772062 + AT_rich Low_complexity Low_complexity 1 21 0 3 751 25 31 0 0 chr3L 21774510 21774542 -2769015 + AT_rich Low_complexity Low_complexity 1 32 0 3 751 237 108 0 0 chr3L 21775956 21775993 -2767564 + (GTTTG)n Simple_repeat Simple_repeat 5 41 0 3 751 24 0 0 0 chr3L 21777906 21777930 -2765627 + AT_rich Low_complexity Low_complexity 1 24 0 3 751 42 57 0 0 chr3L 21779864 21779934 -2763623 + AT_rich Low_complexity Low_complexity 1 70 0 3 751 262 180 0 47 chr3L 21780109 21780173 -2763384 - DNAREP1_DM LINE Penelope -533 61 1 3 751 183 80 0 0 chr3L 21783572 21783597 -2759960 + (CCCCAG)n Simple_repeat Simple_repeat 5 29 0 3 751 28 29 0 0 chr3L 21788335 21788370 -2755187 + AT_rich Low_complexity Low_complexity 1 35 0 3 751 189 0 0 0 chr3L 21789000 21789021 -2754536 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3 751 23 97 0 0 chr3L 21790523 21790595 -2752962 + AT_rich Low_complexity Low_complexity 1 72 0 3 751 183 80 0 0 chr3L 21791363 21791388 -2752169 + (CTGGGG)n Simple_repeat Simple_repeat 6 30 0 3 751 201 158 0 0 chr3L 21793663 21793701 -2749856 + GA-rich Low_complexity Low_complexity 3 40 0 3 751 304 250 26 0 chr3L 21794232 21794308 -2749249 + DNAREP1_DM LINE Penelope 381 458 -136 3 751 309 109 0 0 chr3L 21794328 21794374 -2749183 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 3 751 351 68 0 0 chr3L 21794375 21794419 -2749138 + G3_DM LINE Jockey 4542 4585 -20 3 751 32 26 0 0 chr3L 21794481 21794520 -2749037 + AT_rich Low_complexity Low_complexity 1 39 0 3 751 189 74 0 0 chr3L 21795968 21795995 -2747562 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 3 751 208 147 0 0 chr3L 21799102 21799136 -2744421 + (TTG)n Simple_repeat Simple_repeat 1 34 0 3 751 24 77 0 0 chr3L 21799550 21799602 -2743955 + AT_rich Low_complexity Low_complexity 1 52 0 3 751 44 35 0 0 chr3L 21801545 21801603 -2741954 + AT_rich Low_complexity Low_complexity 1 58 0 3 751 251 179 15 0 chr3L 21801835 21801902 -2741655 + (CTG)n Simple_repeat Simple_repeat 1 68 0 3 751 247 0 127 0 chr3L 21803096 21803159 -2740398 + (TGGA)n Simple_repeat Simple_repeat 2 72 0 3 751 264 264 0 0 chr3L 21803325 21803378 -2740179 + (TTCGGG)n Simple_repeat Simple_repeat 5 57 0 3 751 813 137 0 0 chr3L 21805229 21805397 -2738160 + (TAA)n Simple_repeat Simple_repeat 3 170 0 3 751 205 86 29 0 chr3L 21805397 21805432 -2738125 + (TTATA)n Simple_repeat Simple_repeat 5 40 0 3 751 1449 39 0 0 chr3L 21805432 21805612 -2737945 + (TAA)n Simple_repeat Simple_repeat 1 180 0 3 751 21 36 0 0 chr3L 21805701 21805729 -2737828 + AT_rich Low_complexity Low_complexity 1 28 0 3 751 22 0 0 0 chr3L 21805841 21805863 -2737694 + AT_rich Low_complexity Low_complexity 1 22 0 3 751 198 128 0 0 chr3L 21805903 21805942 -2737615 + (CTATA)n Simple_repeat Simple_repeat 3 41 0 3 751 1016 147 86 61 chr3L 21806932 21807231 -2736326 - DNAREP1_DM LINE Penelope -144 450 20 3 751 24 0 0 0 chr3L 21807406 21807430 -2736127 + AT_rich Low_complexity Low_complexity 1 24 0 3 751 21 0 0 0 chr3L 21808841 21808862 -2734695 + AT_rich Low_complexity Low_complexity 1 21 0 3 751 386 244 131 19 chr3L 21808919 21809176 -2734381 + DNAREP1_DM LINE Penelope 32 261 -333 3 751 27 0 0 0 chr3L 21811001 21811028 -2732529 + AT_rich Low_complexity Low_complexity 1 27 0 3 751 303 136 0 0 chr3L 21812778 21812837 -2730720 + (CAGT)n Simple_repeat Simple_repeat 3 61 0 3 751 28 48 0 0 chr3L 21813189 21813231 -2730326 + AT_rich Low_complexity Low_complexity 1 42 0 3 751 250 125 0 0 chr3L 21813937 21813977 -2729580 + PROTOP_B DNA P 506 545 -608 3 751 283 234 234 0 chr3L 21814040 21814134 -2729423 + DNAREP1_DM LINE Penelope 431 546 -48 3 751 26 50 0 0 chr3L 21814776 21814816 -2728741 + AT_rich Low_complexity Low_complexity 1 40 0 3 751 25 0 0 0 chr3L 21816484 21816509 -2727048 + AT_rich Low_complexity Low_complexity 1 25 0 3 751 33 25 0 0 chr3L 21823502 21823542 -2720015 + AT_rich Low_complexity Low_complexity 1 40 0 3 751 23 0 0 0 chr3L 21823655 21823678 -2719879 + AT_rich Low_complexity Low_complexity 1 23 0 3 751 231 125 0 0 chr3L 21825456 21825496 -2718061 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 751 603 174 0 0 chr3L 21825523 21825667 -2717890 + (TA)n Simple_repeat Simple_repeat 1 144 0 3 751 231 252 0 0 chr3L 21828758 21828869 -2714688 + (CGG)n Simple_repeat Simple_repeat 2 112 0 3 751 25 31 0 0 chr3L 21830207 21830239 -2713318 + AT_rich Low_complexity Low_complexity 1 32 0 3 751 189 94 0 0 chr3L 21836591 21836623 -2706934 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 751 180 125 0 0 chr3L 21837831 21837863 -2705694 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 751 42 48 0 0 chr3L 21839839 21839902 -2703655 + AT_rich Low_complexity Low_complexity 1 63 0 3 751 23 0 0 0 chr3L 21840229 21840252 -2703305 + AT_rich Low_complexity Low_complexity 1 23 0 3 751 26 64 0 0 chr3L 21842792 21842839 -2700718 + AT_rich Low_complexity Low_complexity 1 47 0 3 751 285 29 0 0 chr3L 21843491 21843525 -2700032 + (CCCTG)n Simple_repeat Simple_repeat 2 35 0 3 751 180 77 0 0 chr3L 21843541 21843567 -2699990 + (TCTA)n Simple_repeat Simple_repeat 2 27 0 3 751 31 26 0 0 chr3L 21844275 21844313 -2699244 + AT_rich Low_complexity Low_complexity 1 38 0 3 751 24 0 0 0 chr3L 21845365 21845389 -2698168 + AT_rich Low_complexity Low_complexity 1 24 0 3 751 23 0 0 0 chr3L 21847419 21847442 -2696115 + AT_rich Low_complexity Low_complexity 1 23 0 3 751 186 103 0 0 chr3L 21847674 21847703 -2695854 + (TTCTG)n Simple_repeat Simple_repeat 1 29 0 3 751 919 240 110 10 chr3L 21850161 21850451 -2693106 + DNAREP1_DM LINE Penelope 275 593 -1 3 751 251 174 165 52 chr3L 21850365 21850462 -2693095 - P_DG DNA P -33 2855 2748 3 751 225 219 0 0 chr3L 21850859 21850932 -2692625 + (CAGT)n Simple_repeat Simple_repeat 1 73 0 3 751 761 99 111 34 chr3L 21851508 21851774 -2691783 + DNAREP1_DM LINE Penelope 1 325 -269 3 751 226 100 0 0 chr3L 21851771 21851801 -2691756 + DNAREP1_DM LINE Penelope 461 490 -104 3 751 214 50 0 48 chr3L 21851806 21851848 -2691709 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 3 751 21 0 0 0 chr3L 21852042 21852063 -2691494 + AT_rich Low_complexity Low_complexity 1 21 0 3 751 26 64 0 0 chr3L 21852898 21852945 -2690612 + AT_rich Low_complexity Low_complexity 1 47 0 3 751 56 16 0 0 chr3L 21852972 21853035 -2690522 + AT_rich Low_complexity Low_complexity 1 63 0 3 751 207 88 0 0 chr3L 21854447 21854481 -2689076 + (A)n Simple_repeat Simple_repeat 1 34 0 3 751 192 97 0 0 chr3L 21854905 21854936 -2688621 + (CCCA)n Simple_repeat Simple_repeat 3 33 0 3 751 418 189 276 0 chr3L 21855265 21855392 -2688165 - DNAREP1_DM LINE Penelope -2 592 431 3 751 265 157 0 73 chr3L 21855405 21855460 -2688097 - DNAREP1_DM LINE Penelope -149 445 395 3 751 233 217 0 0 chr3L 21858687 21858733 -2684824 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 3 751 225 0 0 0 chr3L 21859617 21859642 -2683915 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 751 22 56 0 0 chr3L 21860246 21860282 -2683275 + AT_rich Low_complexity Low_complexity 1 36 0 3 751 358 103 17 0 chr3L 21861568 21861626 -2681931 - DNAREP1_DM LINE Penelope -1 593 535 3 751 23 33 0 0 chr3L 21862227 21862257 -2681300 + AT_rich Low_complexity Low_complexity 1 30 0 3 751 31 0 0 0 chr3L 21862337 21862368 -2681189 + AT_rich Low_complexity Low_complexity 1 31 0 3 751 22 0 0 0 chr3L 21862958 21862980 -2680577 + AT_rich Low_complexity Low_complexity 1 22 0 3 751 25 0 0 0 chr3L 21863352 21863377 -2680180 + AT_rich Low_complexity Low_complexity 1 25 0 3 751 180 0 0 0 chr3L 21865008 21865028 -2678529 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 751 35 41 0 0 chr3L 21865322 21865371 -2678186 + AT_rich Low_complexity Low_complexity 1 49 0 3 751 334 69 35 0 chr3L 21867230 21867288 -2676269 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 751 26 50 0 0 chr3L 21869473 21869513 -2674044 + AT_rich Low_complexity Low_complexity 1 40 0 3 751 22 0 0 0 chr3L 21870017 21870039 -2673518 + AT_rich Low_complexity Low_complexity 1 22 0 3 751 22 0 0 0 chr3L 21870132 21870154 -2673403 + AT_rich Low_complexity Low_complexity 1 22 0 3 751 1335 131 219 10 chr3L 21870735 21871045 -2672512 + DNAREP1_DM LINE Penelope 98 587 -7 3 751 1448 159 137 104 chr3L 21871857 21872355 -2671202 + Transib-N1_DM DNA Transib 1 514 0 3 751 225 0 0 0 chr3L 21873251 21873276 -2670281 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 751 2440 11 0 0 chr3L 21874291 21874557 -2669000 - Invader2_LTR LTR Gypsy 0 266 1 3 751 21 36 0 0 chr3L 21875786 21875814 -2667743 + AT_rich Low_complexity Low_complexity 1 28 0 3 751 241 284 0 0 chr3L 21876154 21876221 -2667336 + (TCG)n Simple_repeat Simple_repeat 3 69 0 3 751 23 0 0 0 chr3L 21880614 21880637 -2662920 + AT_rich Low_complexity Low_complexity 1 23 0 3 751 219 114 0 0 chr3L 21880910 21880945 -2662612 + (ACTG)n Simple_repeat Simple_repeat 2 36 0 3 751 201 256 0 0 chr3L 21887868 21887911 -2655646 + (CATA)n Simple_repeat Simple_repeat 3 45 0 3 751 246 81 0 0 chr3L 21888035 21888072 -2655485 + (CAG)n Simple_repeat Simple_repeat 1 37 0 3 752 21 36 0 0 chr3L 21891121 21891149 -2652408 + AT_rich Low_complexity Low_complexity 1 28 0 3 752 21 0 0 0 chr3L 21891702 21891723 -2651834 + AT_rich Low_complexity Low_complexity 1 21 0 3 752 25 0 0 0 chr3L 21892090 21892115 -2651442 + AT_rich Low_complexity Low_complexity 1 25 0 3 752 201 108 0 0 chr3L 21892493 21892530 -2651027 + (GTCTG)n Simple_repeat Simple_repeat 1 37 0 3 752 191 88 0 29 chr3L 21893591 21893626 -2649931 + (ATG)n Simple_repeat Simple_repeat 1 34 0 3 752 22 0 0 0 chr3L 21894582 21894604 -2648953 + AT_rich Low_complexity Low_complexity 1 22 0 3 752 21 0 0 0 chr3L 21896829 21896850 -2646707 + AT_rich Low_complexity Low_complexity 1 21 0 3 752 231 290 0 28 chr3L 21897364 21897435 -2646122 + (CGA)n Simple_repeat Simple_repeat 2 70 0 3 752 27 0 0 0 chr3L 21901737 21901764 -2641793 + AT_rich Low_complexity Low_complexity 1 27 0 3 752 21 57 0 0 chr3L 21905402 21905437 -2638120 + AT_rich Low_complexity Low_complexity 1 35 0 3 752 242 143 16 0 chr3L 21910449 21910512 -2633045 + (CAGTA)n Simple_repeat Simple_repeat 1 64 0 3 752 261 0 0 0 chr3L 21915120 21915149 -2628408 + (A)n Simple_repeat Simple_repeat 1 29 0 3 752 316 38 0 71 chr3L 21917841 21917897 -2625660 + (CATA)n Simple_repeat Simple_repeat 1 52 0 3 752 220 310 8 8 chr3L 21918387 21918504 -2625053 + (CAG)n Simple_repeat Simple_repeat 2 118 0 3 752 264 215 0 0 chr3L 21918435 21918500 -2625057 + GA-rich Low_complexity Low_complexity 6 70 0 3 752 23 33 0 0 chr3L 21919192 21919222 -2624335 + AT_rich Low_complexity Low_complexity 1 30 0 3 752 21 36 0 0 chr3L 21920013 21920041 -2623516 + AT_rich Low_complexity Low_complexity 1 28 0 3 752 265 123 15 15 chr3L 21920780 21920846 -2622711 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 752 204 233 0 0 chr3L 21922729 21922772 -2620785 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 3 752 24 53 0 0 chr3L 21922979 21923017 -2620540 + AT_rich Low_complexity Low_complexity 1 38 0 3 752 192 158 0 0 chr3L 21924934 21924972 -2618585 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 752 479 112 11 0 chr3L 21925280 21925369 -2618188 + (TA)n Simple_repeat Simple_repeat 2 91 0 3 752 222 111 0 62 chr3L 21925726 21925774 -2617783 + GA-rich Low_complexity Low_complexity 3 47 0 3 752 317 230 0 0 chr3L 21925903 21925977 -2617580 - DNAREP1_DM LINE Penelope 0 594 521 3 752 367 155 0 17 chr3L 21928999 21929058 -2614499 - DNAREP1_DM LINE Penelope -150 444 387 3 752 273 184 110 44 chr3L 21929085 21929176 -2614381 - DNAREP1_DM LINE Penelope -267 327 231 3 752 263 163 0 0 chr3L 21929201 21929244 -2614313 - PROTOP_B DNA P -607 546 504 3 752 757 164 97 16 chr3L 21939328 21939490 -2604067 - DNAREP1_DM LINE Penelope -2 592 431 3 752 283 148 0 36 chr3L 21939475 21939531 -2604026 - DNAREP1_DM LINE Penelope -281 313 260 3 752 258 200 100 0 chr3L 21939599 21939659 -2603898 - DNAREP1_DM LINE Penelope -101 493 428 3 752 21 57 0 0 chr3L 21945354 21945389 -2598168 + AT_rich Low_complexity Low_complexity 1 35 0 3 752 1006 141 0 61 chr3L 21945639 21945851 -2597706 + M4DM DNA Transib 161 359 -1076 3 752 287 266 68 68 chr3L 21945843 21945976 -2597581 - TRANSIB1 DNA Transib -702 2312 2180 3 752 22 35 0 0 chr3L 21947515 21947544 -2596013 + AT_rich Low_complexity Low_complexity 1 29 0 3 752 1423 79 10 10 chr3L 21947618 21947822 -2595735 + DNAREP1_DM LINE Penelope 1 204 -390 3 752 547 73 395 0 chr3L 21947831 21947940 -2595617 + DNAREP1_DM LINE Penelope 443 594 0 3 752 617 53 0 0 chr3L 21947952 21948027 -2595530 + DNAREP1_DM LINE Penelope 520 594 0 3 752 1457 124 167 15 chr3L 21951565 21951864 -2591693 - DNAREP1_DM LINE Penelope -49 545 85 3 752 2591 25 164 0 chr3L 21951868 21952236 -2591321 + ROO_LTR LTR Pao 1 428 0 3 752 1457 124 167 15 chr3L 21954027 21954326 -2589231 - DNAREP1_DM LINE Penelope -49 545 85 3 752 2591 25 164 0 chr3L 21954330 21954698 -2588859 + ROO_LTR LTR Pao 1 428 0 3 752 267 88 0 0 chr3L 21959775 21959809 -2583748 - DNAREP1_DM LINE Penelope -130 464 431 3 752 22 35 0 0 chr3L 21977351 21977380 -2566177 + AT_rich Low_complexity Low_complexity 1 29 0 3 752 33 0 0 0 chr3L 21977797 21977830 -2565727 + AT_rich Low_complexity Low_complexity 1 33 0 3 752 35 0 0 0 chr3L 21987140 21987175 -2556382 + AT_rich Low_complexity Low_complexity 1 35 0 3 752 261 155 0 0 chr3L 21989424 21989482 -2554075 + GA-rich Low_complexity Low_complexity 1 58 0 3 752 314 91 52 0 chr3L 22000263 22000340 -2543217 + (TTATA)n Simple_repeat Simple_repeat 5 85 0 3 752 371 281 0 0 chr3L 22000464 22000560 -2542997 + DNAREP1_DM LINE Penelope 17 112 -482 3 752 225 132 0 0 chr3L 22004591 22004629 -2538928 + (CATCC)n Simple_repeat Simple_repeat 5 42 0 3 752 22 35 0 0 chr3L 22005514 22005543 -2538014 + AT_rich Low_complexity Low_complexity 1 29 0 3 752 601 210 67 0 chr3L 22006804 22006923 -2536634 - DNAREP1_DM LINE Penelope -97 497 371 3 752 285 98 0 0 chr3L 22008579 22008620 -2534937 + (GCTTG)n Simple_repeat Simple_repeat 2 42 0 3 752 273 175 32 0 chr3L 22008825 22008888 -2534669 + ROO_I LTR Pao 665 729 -7527 3 752 344 182 61 0 chr3L 22009781 22009847 -2533710 - DNAREP1_DM LINE Penelope -82 512 443 3 752 573 107 12 0 chr3L 22010205 22010289 -2533268 + DNAREP1_DM LINE Penelope 36 120 -474 3 752 1043 65 344 4 chr3L 22010292 22010522 -2533035 + DNAREP1_DM LINE Penelope 283 590 -4 3 752 448 241 67 8 chr3L 22014245 22014379 -2529178 + DNAREP1_DM LINE Penelope 1 142 -452 3 752 543 157 148 0 chr3L 22014384 22014499 -2529058 + DNAREP1_DM LINE Penelope 450 581 -13 3 752 28 29 0 0 chr3L 22016281 22016316 -2527241 + AT_rich Low_complexity Low_complexity 1 35 0 3 752 216 200 0 0 chr3L 22017386 22017431 -2526126 + CT-rich Low_complexity Low_complexity 2 46 0 3 752 29 28 0 0 chr3L 22019319 22019355 -2524202 + AT_rich Low_complexity Low_complexity 1 36 0 3 753 314 211 0 0 chr3L 22021809 22021866 -2521691 - DNAREP1_DM LINE Penelope -535 59 3 3 753 21 36 0 0 chr3L 22023328 22023356 -2520201 + AT_rich Low_complexity Low_complexity 1 28 0 3 753 23 0 0 0 chr3L 22026898 22026921 -2516636 + AT_rich Low_complexity Low_complexity 1 23 0 3 753 21 0 0 0 chr3L 22027758 22027779 -2515778 + AT_rich Low_complexity Low_complexity 1 21 0 3 753 629 180 139 148 chr3L 22029920 22030252 -2513305 + DNAREP1_DM LINE Penelope 2 330 -264 3 753 283 241 72 0 chr3L 22030332 22030415 -2513142 + DNAREP1_DM LINE Penelope 506 594 0 3 753 23 0 0 0 chr3L 22034225 22034248 -2509309 + AT_rich Low_complexity Low_complexity 1 23 0 3 753 24 32 0 0 chr3L 22037537 22037568 -2505989 + AT_rich Low_complexity Low_complexity 1 31 0 3 753 299 160 292 92 chr3L 22042764 22042919 -2500638 - DNAREP1_DM LINE Penelope -105 489 311 3 753 64 50 0 0 chr3L 22050224 22050323 -2493234 + AT_rich Low_complexity Low_complexity 1 99 0 3 753 299 172 110 105 chr3L 22054695 22054822 -2488735 - DNAREP1_DM LINE Penelope -141 453 348 3 753 23 33 0 0 chr3L 22054824 22054854 -2488703 + AT_rich Low_complexity Low_complexity 1 30 0 3 753 23 33 0 0 chr3L 22056204 22056234 -2487323 + AT_rich Low_complexity Low_complexity 1 30 0 3 753 1764 89 207 28 chr3L 22056287 22056610 -2486947 - DNAREP1_DM LINE Penelope 0 594 214 3 753 21 36 0 0 chr3L 22062422 22062450 -2481107 + AT_rich Low_complexity Low_complexity 1 28 0 3 753 471 155 0 0 chr3L 22064470 22064554 -2479003 + (TTA)n Simple_repeat Simple_repeat 2 85 0 3 753 586 71 162 10 chr3L 22065318 22065417 -2478140 + DNAREP1_DM LINE Penelope 5 118 -476 3 753 287 243 73 7 chr3L 22065598 22065735 -2477822 + DNAREP1_DM LINE Penelope 124 269 -325 3 753 329 47 43 65 chr3L 22065745 22065837 -2477720 + (TATAA)n Simple_repeat Simple_repeat 2 91 0 3 753 850 168 48 0 chr3L 22065839 22066006 -2477551 + DNAREP1_DM LINE Penelope 241 415 -179 3 753 601 109 69 0 chr3L 22066024 22066125 -2477432 - FB4_DM DNA Tc1 -2876 1213 1106 3 753 25 31 0 0 chr3L 22066174 22066206 -2477351 + AT_rich Low_complexity Low_complexity 1 32 0 3 753 192 97 0 0 chr3L 22068198 22068229 -2475328 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 3 753 223 277 0 0 chr3L 22072081 22072146 -2471411 + (CTG)n Simple_repeat Simple_repeat 1 65 0 3 753 257 203 15 45 chr3L 22072497 22072564 -2470993 - DNAREP1_DM LINE Penelope -2 592 528 3 753 26 82 0 0 chr3L 22073668 22073729 -2469828 + AT_rich Low_complexity Low_complexity 1 61 0 3 753 21 0 0 0 chr3L 22074788 22074809 -2468748 + AT_rich Low_complexity Low_complexity 1 21 0 3 753 420 126 0 0 chr3L 22076025 22076112 -2467445 + (CAG)n Simple_repeat Simple_repeat 3 89 0 3 753 25 0 0 0 chr3L 22076485 22076510 -2467047 + AT_rich Low_complexity Low_complexity 1 25 0 3 753 281 193 0 0 chr3L 22076577 22076634 -2466923 - DNAREP1_DM LINE Penelope -535 59 3 3 753 23 54 0 0 chr3L 22078811 22078848 -2464709 + AT_rich Low_complexity Low_complexity 1 37 0 3 753 1891 20 16 12 chr3L 22079171 22079418 -2464139 - IDEFIX_I LTR Gypsy -45 5583 5336 3 753 322 231 0 127 chr3L 22082220 22082354 -2461203 - DNAREP1_DM LINE Penelope -123 471 355 3 753 510 206 13 64 chr3L 22082357 22082513 -2461044 - DNAREP1_DM LINE Penelope -437 157 10 3 753 258 81 0 0 chr3L 22082933 22082970 -2460587 + (CATTT)n Simple_repeat Simple_repeat 4 40 0 3 753 208 327 0 38 chr3L 22084866 22084971 -2458586 + G-rich Low_complexity Low_complexity 5 105 0 3 753 25 0 0 0 chr3L 22087380 22087405 -2456152 + AT_rich Low_complexity Low_complexity 1 25 0 3 753 23 0 0 0 chr3L 22091504 22091527 -2452030 + AT_rich Low_complexity Low_complexity 1 23 0 3 753 3329 6 0 0 chr3L 22092830 22093191 -2450366 + BEL_LTR LTR Pao 1 361 0 3 753 50767 1 0 0 chr3L 22093191 22098597 -2444960 + BEL_I LTR Pao 1 5404 0 3 753 3353 3 0 0 chr3L 22098597 22098958 -2444599 + BEL_LTR LTR Pao 1 361 0 3 753 186 150 0 0 chr3L 22102314 22102354 -2441203 + (GGGAA)n Simple_repeat Simple_repeat 1 40 0 3 753 240 86 0 0 chr3L 22102714 22102749 -2440808 + (CCA)n Simple_repeat Simple_repeat 1 35 0 3 753 25 31 0 0 chr3L 22106306 22106338 -2437219 + AT_rich Low_complexity Low_complexity 1 32 0 3 753 21 36 0 0 chr3L 22111258 22111286 -2432271 + AT_rich Low_complexity Low_complexity 1 28 0 3 753 856 140 77 48 chr3L 22112833 22113121 -2430436 - DMRP1 Unknown Unknown -11 335 9 3 753 21 82 0 0 chr3L 22114089 22114138 -2429419 + AT_rich Low_complexity Low_complexity 1 49 0 3 753 26 0 0 0 chr3L 22114702 22114728 -2428829 + AT_rich Low_complexity Low_complexity 1 26 0 3 753 231 88 0 0 chr3L 22114755 22114789 -2428768 + (TATG)n Simple_repeat Simple_repeat 3 36 0 3 753 291 54 0 0 chr3L 22116383 22116420 -2427137 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 753 314 80 20 0 chr3L 22116867 22116917 -2426640 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 753 203 233 0 0 chr3L 22116940 22116983 -2426574 + (CTGGGG)n Simple_repeat Simple_repeat 3 45 0 3 753 195 42 0 0 chr3L 22117671 22117695 -2425862 + (CAGTG)n Simple_repeat Simple_repeat 2 25 0 3 753 22 0 0 0 chr3L 22119974 22119996 -2423561 + AT_rich Low_complexity Low_complexity 1 22 0 3 753 22 56 0 0 chr3L 22124577 22124613 -2418944 + AT_rich Low_complexity Low_complexity 1 36 0 3 753 24 0 0 0 chr3L 22125133 22125157 -2418400 + AT_rich Low_complexity Low_complexity 1 24 0 3 753 24 67 0 0 chr3L 22126982 22127027 -2416530 + AT_rich Low_complexity Low_complexity 1 45 0 3 753 186 118 0 0 chr3L 22129768 22129802 -2413755 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 753 22 0 0 0 chr3L 22132789 22132811 -2410746 + AT_rich Low_complexity Low_complexity 1 22 0 3 753 210 283 0 0 chr3L 22133976 22134022 -2409535 + (CTGGGG)n Simple_repeat Simple_repeat 6 51 0 3 753 219 69 0 0 chr3L 22134964 22134993 -2408564 + (CAT)n Simple_repeat Simple_repeat 3 31 0 3 753 208 290 0 0 chr3L 22137562 22137624 -2405933 + CT-rich Low_complexity Low_complexity 2 63 0 3 753 26 0 0 0 chr3L 22139458 22139484 -2404073 + AT_rich Low_complexity Low_complexity 1 26 0 3 753 24 32 0 0 chr3L 22140058 22140089 -2403468 + AT_rich Low_complexity Low_complexity 1 31 0 3 753 183 42 0 0 chr3L 22142691 22142715 -2400842 + (T)n Simple_repeat Simple_repeat 1 24 0 3 753 21 0 0 0 chr3L 22145186 22145207 -2398350 + AT_rich Low_complexity Low_complexity 1 21 0 3 753 258 32 0 0 chr3L 22150283 22150314 -2393243 + (GAGTG)n Simple_repeat Simple_repeat 1 31 0 3 754 25 0 0 0 chr3L 22153627 22153652 -2389905 + AT_rich Low_complexity Low_complexity 1 25 0 3 754 201 152 0 0 chr3L 22157534 22157567 -2385990 + (CATA)n Simple_repeat Simple_repeat 3 35 0 3 754 198 71 0 0 chr3L 22159089 22159117 -2384440 + (CATCC)n Simple_repeat Simple_repeat 5 32 0 3 754 203 278 19 0 chr3L 22162894 22162948 -2380609 + (TATG)n Simple_repeat Simple_repeat 2 56 0 3 754 180 0 0 0 chr3L 22164509 22164529 -2379028 + (CAGGC)n Simple_repeat Simple_repeat 4 23 0 3 754 23 54 0 0 chr3L 22170470 22170507 -2373050 + AT_rich Low_complexity Low_complexity 1 37 0 3 754 213 180 0 0 chr3L 22173211 22173261 -2370296 + (TTG)n Simple_repeat Simple_repeat 1 50 0 3 754 204 227 0 0 chr3L 22174233 22174277 -2369280 + CT-rich Low_complexity Low_complexity 1 44 0 3 754 209 286 0 0 chr3L 22174977 22175026 -2368531 + (ATG)n Simple_repeat Simple_repeat 3 51 0 3 754 266 211 0 17 chr3L 22176040 22176098 -2367459 + (CGGA)n Simple_repeat Simple_repeat 3 59 0 3 754 216 167 0 0 chr3L 22176639 22176675 -2366882 + (TGGA)n Simple_repeat Simple_repeat 3 38 0 3 754 21 36 0 0 chr3L 22180190 22180218 -2363339 + AT_rich Low_complexity Low_complexity 1 28 0 3 754 215 216 0 0 chr3L 22180833 22180884 -2362673 + (ATGGTG)n Simple_repeat Simple_repeat 3 53 0 3 754 201 328 0 0 chr3L 22187441 22187499 -2356058 + (CCCGAA)n Simple_repeat Simple_repeat 3 60 0 3 754 223 182 0 0 chr3L 22196237 22196281 -2347276 + (AGTTG)n Simple_repeat Simple_repeat 2 45 0 3 754 189 0 0 0 chr3L 22197832 22197853 -2345704 + (TC)n Simple_repeat Simple_repeat 2 22 0 3 754 192 135 0 0 chr3L 22198325 22198362 -2345195 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 754 31 44 0 0 chr3L 22201689 22201734 -2341823 + AT_rich Low_complexity Low_complexity 1 45 0 3 754 24 53 0 0 chr3L 22203121 22203159 -2340398 + AT_rich Low_complexity Low_complexity 1 38 0 3 754 222 37 0 0 chr3L 22204483 22204510 -2339047 + (TTA)n Simple_repeat Simple_repeat 2 28 0 3 754 224 283 0 0 chr3L 22204688 22204748 -2338809 + (TTG)n Simple_repeat Simple_repeat 2 61 0 3 754 21 36 0 0 chr3L 22204865 22204893 -2338664 + AT_rich Low_complexity Low_complexity 1 28 0 3 754 21 0 0 0 chr3L 22208286 22208307 -2335250 + AT_rich Low_complexity Low_complexity 1 21 0 3 754 191 204 0 18 chr3L 22209522 22209577 -2333980 + (TGAG)n Simple_repeat Simple_repeat 3 56 0 3 754 281 47 23 0 chr3L 22213164 22213207 -2330350 + (CTG)n Simple_repeat Simple_repeat 1 44 0 3 754 211 103 102 17 chr3L 22215135 22215194 -2328363 + (TTAA)n Simple_repeat Simple_repeat 4 67 0 3 754 258 143 0 0 chr3L 22216645 22216694 -2326863 + (CAACC)n Simple_repeat Simple_repeat 4 52 0 3 754 246 32 0 0 chr3L 22218588 22218619 -2324938 + (T)n Simple_repeat Simple_repeat 1 31 0 3 754 218 32 0 31 chr3L 22220141 22220173 -2323384 + (AAATG)n Simple_repeat Simple_repeat 4 34 0 3 754 243 88 0 0 chr3L 22223040 22223074 -2320483 + (GGATG)n Simple_repeat Simple_repeat 4 37 0 3 754 280 64 43 0 chr3L 22224716 22224763 -2318794 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 754 231 114 0 0 chr3L 22225543 22225578 -2317979 + (CGAAT)n Simple_repeat Simple_repeat 5 39 0 3 754 25 0 0 0 chr3L 22230469 22230494 -2313063 + AT_rich Low_complexity Low_complexity 1 25 0 3 754 204 97 0 0 chr3L 22231092 22231123 -2312434 + (CGAAA)n Simple_repeat Simple_repeat 4 34 0 3 754 23 33 0 0 chr3L 22231292 22231322 -2312235 + AT_rich Low_complexity Low_complexity 1 30 0 3 754 220 213 40 13 chr3L 22236187 22236263 -2307294 + A-rich Low_complexity Low_complexity 4 81 0 3 754 236 181 30 60 chr3L 22237468 22237568 -2305989 + (CATATA)n Simple_repeat Simple_repeat 2 98 0 3 754 183 129 0 0 chr3L 22237903 22237934 -2305623 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 754 205 259 0 0 chr3L 22240045 22240103 -2303454 + (CATA)n Simple_repeat Simple_repeat 2 59 0 3 754 230 56 28 0 chr3L 22240835 22240871 -2302686 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 754 21 57 0 0 chr3L 22241691 22241726 -2301831 + AT_rich Low_complexity Low_complexity 1 35 0 3 754 195 42 0 0 chr3L 22245769 22245793 -2297764 + (CCCA)n Simple_repeat Simple_repeat 3 26 0 3 754 195 42 0 0 chr3L 22246654 22246678 -2296879 + (TTTAA)n Simple_repeat Simple_repeat 5 28 0 3 754 27 0 0 0 chr3L 22246696 22246723 -2296834 + AT_rich Low_complexity Low_complexity 1 27 0 3 754 362 21 0 21 chr3L 22246749 22246797 -2296760 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 754 244 259 0 0 chr3L 22247239 22247293 -2296264 + (CGGA)n Simple_repeat Simple_repeat 1 54 0 3 754 22 0 0 0 chr3L 22249327 22249349 -2294208 + AT_rich Low_complexity Low_complexity 1 22 0 3 754 22 103 0 0 chr3L 22250861 22250939 -2292618 + AT_rich Low_complexity Low_complexity 1 78 0 3 754 324 83 0 0 chr3L 22259180 22259228 -2284329 + (TCC)n Simple_repeat Simple_repeat 2 49 0 3 754 284 194 30 0 chr3L 22260001 22260068 -2283489 + HOBO DNA hAT 2278 2346 -670 3 754 54 78 0 19 chr3L 22260068 22260225 -2283332 + AT_rich Low_complexity Low_complexity 1 154 0 3 754 664 176 245 14 chr3L 22260240 22260532 -2283025 + HOBO DNA hAT 2659 3016 0 3 754 47 0 0 0 chr3L 22262622 22262669 -2280888 + AT_rich Low_complexity Low_complexity 1 47 0 3 754 255 133 0 0 chr3L 22262921 22262966 -2280591 + (CTG)n Simple_repeat Simple_repeat 3 47 0 3 754 21 36 0 0 chr3L 22266666 22266694 -2276863 + AT_rich Low_complexity Low_complexity 1 28 0 3 754 21 71 0 0 chr3L 22269043 22269085 -2274472 + AT_rich Low_complexity Low_complexity 1 42 0 3 754 243 236 0 0 chr3L 22273340 22273395 -2270162 + (CCCGAA)n Simple_repeat Simple_repeat 2 56 0 3 754 180 152 0 0 chr3L 22274704 22274737 -2268820 + (CAA)n Simple_repeat Simple_repeat 1 33 0 3 754 401 145 53 0 chr3L 22275092 22275168 -2268389 + DNAREP1_DM LINE Penelope 366 445 -149 3 754 345 150 0 0 chr3L 22275197 22275257 -2268300 + DNAREP1_DM LINE Penelope 520 579 -15 3 754 364 200 89 0 chr3L 22275439 22275529 -2268028 + DNAREP1_DM LINE Penelope 143 240 -354 3 754 317 188 240 0 chr3L 22275526 22275622 -2267935 + DNAREP1_DM LINE Penelope 434 552 -42 3 754 33 25 0 0 chr3L 22281407 22281447 -2262110 + AT_rich Low_complexity Low_complexity 1 40 0 3 755 21 36 0 0 chr3L 22286132 22286160 -2257397 + AT_rich Low_complexity Low_complexity 1 28 0 3 755 24 32 0 0 chr3L 22286178 22286209 -2257348 + AT_rich Low_complexity Low_complexity 1 31 0 3 755 26 0 0 0 chr3L 22286891 22286917 -2256640 + AT_rich Low_complexity Low_complexity 1 26 0 3 755 30 0 0 0 chr3L 22287196 22287226 -2256331 + AT_rich Low_complexity Low_complexity 1 30 0 3 755 22 70 0 0 chr3L 22295654 22295697 -2247860 + AT_rich Low_complexity Low_complexity 1 43 0 3 755 183 42 0 0 chr3L 22299523 22299547 -2244010 + (TCC)n Simple_repeat Simple_repeat 2 25 0 3 755 26 50 0 0 chr3L 22303463 22303503 -2240054 + AT_rich Low_complexity Low_complexity 1 40 0 3 755 21 0 0 0 chr3L 22309769 22309790 -2233767 + AT_rich Low_complexity Low_complexity 1 21 0 3 755 215 156 0 22 chr3L 22310227 22310273 -2233284 + (CAG)n Simple_repeat Simple_repeat 1 45 0 3 755 195 42 0 0 chr3L 22320640 22320664 -2222893 + (CAGT)n Simple_repeat Simple_repeat 3 26 0 3 755 615 125 0 0 chr3L 22324324 22324428 -2219129 + (CAA)n Simple_repeat Simple_repeat 1 104 0 3 755 225 108 0 0 chr3L 22325073 22325110 -2218447 + (CAAAC)n Simple_repeat Simple_repeat 3 39 0 3 755 201 94 0 0 chr3L 22327986 22328018 -2215539 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 755 223 288 0 0 chr3L 22329699 22329758 -2213799 + (CAG)n Simple_repeat Simple_repeat 3 61 0 3 755 186 209 0 0 chr3L 22331387 22331430 -2212127 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 755 240 122 0 0 chr3L 22333042 22333083 -2210474 + (CCGAA)n Simple_repeat Simple_repeat 4 44 0 3 755 210 227 0 0 chr3L 22334477 22334521 -2209036 + (CGTG)n Simple_repeat Simple_repeat 3 46 0 3 755 231 125 0 0 chr3L 22336269 22336309 -2207248 + (GGATG)n Simple_repeat Simple_repeat 1 40 0 3 755 222 37 0 0 chr3L 22340007 22340034 -2203523 + (GA)n Simple_repeat Simple_repeat 1 27 0 3 755 23 0 0 0 chr3L 22341210 22341233 -2202324 + AT_rich Low_complexity Low_complexity 1 23 0 3 755 219 88 0 0 chr3L 22345949 22345983 -2197574 + (CAGT)n Simple_repeat Simple_repeat 4 37 0 3 755 27 0 0 0 chr3L 22346092 22346119 -2197438 + AT_rich Low_complexity Low_complexity 1 27 0 3 755 204 318 16 0 chr3L 22349925 22349988 -2193569 + (TATG)n Simple_repeat Simple_repeat 2 65 0 3 755 216 135 0 0 chr3L 22361869 22361906 -2181651 + (CAT)n Simple_repeat Simple_repeat 3 39 0 3 755 270 116 0 0 chr3L 22363712 22363755 -2179802 + (GGATG)n Simple_repeat Simple_repeat 4 46 0 3 755 23 0 0 0 chr3L 22363789 22363812 -2179745 + AT_rich Low_complexity Low_complexity 1 23 0 3 755 23 33 0 0 chr3L 22364322 22364352 -2179205 + AT_rich Low_complexity Low_complexity 1 30 0 3 755 22 0 0 0 chr3L 22366130 22366152 -2177405 + AT_rich Low_complexity Low_complexity 1 22 0 3 755 21 0 0 0 chr3L 22374222 22374243 -2169314 + AT_rich Low_complexity Low_complexity 1 21 0 3 755 22 0 0 0 chr3L 22377534 22377556 -2166001 + AT_rich Low_complexity Low_complexity 1 22 0 3 755 201 152 0 0 chr3L 22377611 22377644 -2165913 + (TTCCG)n Simple_repeat Simple_repeat 4 36 0 3 755 254 314 0 0 chr3L 22379703 22379773 -2163784 + G-rich Low_complexity Low_complexity 1 70 0 3 755 210 162 0 0 chr3L 22386187 22386224 -2157333 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 755 186 103 0 0 chr3L 22387501 22387530 -2156027 + (CGA)n Simple_repeat Simple_repeat 2 30 0 3 755 23 33 0 0 chr3L 22388670 22388700 -2154857 + AT_rich Low_complexity Low_complexity 1 30 0 3 755 22 0 0 0 chr3L 22395220 22395242 -2148315 + AT_rich Low_complexity Low_complexity 1 22 0 3 755 25 0 0 0 chr3L 22395659 22395684 -2147873 + AT_rich Low_complexity Low_complexity 1 25 0 3 755 210 18 102 34 chr3L 22401757 22401816 -2141741 + (TTATA)n Simple_repeat Simple_repeat 5 67 0 3 755 27 49 0 0 chr3L 22412879 22412920 -2130637 + AT_rich Low_complexity Low_complexity 1 41 0 3 756 258 176 0 0 chr3L 22415841 22415892 -2127665 + (AACTG)n Simple_repeat Simple_repeat 1 51 0 3 756 209 182 0 0 chr3L 22417063 22417096 -2126461 + (CGA)n Simple_repeat Simple_repeat 3 35 0 3 756 201 182 0 0 chr3L 22417243 22417298 -2126259 + (CAG)n Simple_repeat Simple_repeat 1 55 0 3 756 24 53 0 0 chr3L 22417534 22417572 -2125985 + AT_rich Low_complexity Low_complexity 1 38 0 3 756 276 271 0 36 chr3L 22418578 22418689 -2124868 + (CCCCAG)n Simple_repeat Simple_repeat 5 111 0 3 756 21 0 0 0 chr3L 22422284 22422305 -2121252 + AT_rich Low_complexity Low_complexity 1 21 0 3 756 192 40 0 0 chr3L 22434765 22434790 -2108767 + (CAGC)n Simple_repeat Simple_repeat 2 26 0 3 756 23 0 0 0 chr3L 22436780 22436803 -2106754 + AT_rich Low_complexity Low_complexity 1 23 0 3 756 25 83 0 0 chr3L 22441508 22441568 -2101989 + AT_rich Low_complexity Low_complexity 1 60 0 3 756 209 211 19 0 chr3L 22441912 22441964 -2101593 + (CAG)n Simple_repeat Simple_repeat 3 55 0 3 756 22 0 0 0 chr3L 22443264 22443286 -2100271 + AT_rich Low_complexity Low_complexity 1 22 0 3 756 22 0 0 0 chr3L 22444256 22444278 -2099279 + AT_rich Low_complexity Low_complexity 1 22 0 3 756 183 80 0 0 chr3L 22446710 22446735 -2096822 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 3 756 25 0 0 0 chr3L 22452100 22452125 -2091432 + AT_rich Low_complexity Low_complexity 1 25 0 3 756 44 46 0 0 chr3L 22454608 22454673 -2088884 + AT_rich Low_complexity Low_complexity 1 65 0 3 756 302 259 78 110 chr3L 22457500 22457691 -2085866 + DNAREP1_DM LINE Penelope 310 494 -100 3 756 36 77 0 0 chr3L 22457972 22458050 -2085507 + AT_rich Low_complexity Low_complexity 1 78 0 3 756 186 171 0 0 chr3L 22459785 22459826 -2083731 + (CAA)n Simple_repeat Simple_repeat 1 41 0 3 756 23 0 0 0 chr3L 22463203 22463226 -2080331 + AT_rich Low_complexity Low_complexity 1 23 0 3 756 23 0 0 0 chr3L 22464871 22464894 -2078663 + AT_rich Low_complexity Low_complexity 1 23 0 3 756 216 0 0 0 chr3L 22464894 22464918 -2078639 + (TA)n Simple_repeat Simple_repeat 1 24 0 3 756 233 135 0 19 chr3L 22470834 22470887 -2072670 + (CAGAC)n Simple_repeat Simple_repeat 5 56 0 3 756 255 114 0 0 chr3L 22472886 22472930 -2070627 + (CAAAC)n Simple_repeat Simple_repeat 2 45 0 3 756 214 241 0 0 chr3L 22481502 22481556 -2062001 + (GGTTG)n Simple_repeat Simple_repeat 3 56 0 3 756 213 262 0 0 chr3L 22482850 22482892 -2060665 + C-rich Low_complexity Low_complexity 6 47 0 3 756 24 0 0 0 chr3L 22483207 22483231 -2060326 + AT_rich Low_complexity Low_complexity 1 24 0 3 756 271 103 0 0 chr3L 22484658 22484697 -2058860 + DNAREP1_DM LINE Penelope 2 40 -554 3 756 261 98 0 0 chr3L 22488002 22488043 -2055514 + (ACTG)n Simple_repeat Simple_repeat 3 43 0 3 756 222 37 0 0 chr3L 22488729 22488756 -2054801 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 756 24 0 0 0 chr3L 22489407 22489431 -2054126 + AT_rich Low_complexity Low_complexity 1 24 0 3 756 22 0 0 0 chr3L 22498397 22498419 -2045138 + AT_rich Low_complexity Low_complexity 1 22 0 3 756 25 65 0 0 chr3L 22498450 22498496 -2045061 + AT_rich Low_complexity Low_complexity 1 46 0 3 756 429 150 50 0 chr3L 22500472 22500552 -2043005 - DNAREP1_DM LINE Penelope 0 594 511 3 756 384 220 27 18 chr3L 22500603 22500714 -2042843 - DNAREP1_DM LINE Penelope -388 206 95 3 756 860 155 138 0 chr3L 22501081 22501262 -2042295 - DNAREP1_DM LINE Penelope -20 574 369 3 756 31 0 0 0 chr3L 22504601 22504632 -2038925 + AT_rich Low_complexity Low_complexity 1 31 0 3 756 24 0 0 0 chr3L 22504718 22504742 -2038815 + AT_rich Low_complexity Low_complexity 1 24 0 3 756 1822 151 34 42 chr3L 22504946 22505401 -2038156 - DNAREP1_DM LINE Penelope -20 574 1 3 756 227 204 0 0 chr3L 22510252 22510301 -2033256 + (TTA)n Simple_repeat Simple_repeat 1 49 0 3 756 307 128 0 0 chr3L 22512165 22512212 -2031345 + DNAREP1_DM LINE Penelope 10 56 -538 3 756 22 35 0 0 chr3L 22513493 22513522 -2030035 + AT_rich Low_complexity Low_complexity 1 29 0 3 756 24 0 0 0 chr3L 22524883 22524907 -2018650 + AT_rich Low_complexity Low_complexity 1 24 0 3 756 358 0 81 0 chr3L 22525108 22525170 -2018387 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 756 5435 31 32 11 chr3L 22525406 22526062 -2017495 - DMCR1A LINE CR1 -228 4242 3573 3 756 4435 45 81 0 chr3L 22526050 22526949 -2016608 - DMCR1A LINE CR1 -2145 2325 1354 3 756 22 80 0 0 chr3L 22526967 22527017 -2016540 + AT_rich Low_complexity Low_complexity 1 50 0 3 756 203 254 0 0 chr3L 22529942 22529997 -2013560 + CT-rich Low_complexity Low_complexity 1 55 0 3 756 195 129 0 0 chr3L 22532201 22532232 -2011325 + (CAT)n Simple_repeat Simple_repeat 1 31 0 3 756 23 0 0 0 chr3L 22533490 22533513 -2010044 + AT_rich Low_complexity Low_complexity 1 23 0 3 756 189 167 0 0 chr3L 22534333 22534387 -2009170 + (TTA)n Simple_repeat Simple_repeat 2 55 0 3 756 26 30 0 0 chr3L 22534479 22534512 -2009045 + AT_rich Low_complexity Low_complexity 1 33 0 3 756 23 54 0 0 chr3L 22538100 22538137 -2005420 + AT_rich Low_complexity Low_complexity 1 37 0 3 756 226 221 125 117 chr3L 22538231 22538359 -2005198 + DNAREP1_DM LINE Penelope 415 543 -51 3 756 1252 127 122 10 chr3L 22541062 22541355 -2002202 + DNAREP1_DM LINE Penelope 1 326 -268 3 756 258 64 0 21 chr3L 22541359 22541407 -2002150 + DNAREP1_DM LINE Penelope 218 264 -330 3 757 280 151 315 0 chr3L 22545570 22545643 -1997914 + DNAREP1_DM LINE Penelope 428 523 -71 3 757 22 0 0 0 chr3L 22545713 22545735 -1997822 + AT_rich Low_complexity Low_complexity 1 22 0 3 757 240 100 0 0 chr3L 22546057 22546097 -1997460 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 757 22 0 0 0 chr3L 22546231 22546253 -1997304 + AT_rich Low_complexity Low_complexity 1 22 0 3 757 3749 2 0 0 chr3L 22548924 22549323 -1994234 + BLOOD_LTR LTR Gypsy 1 399 0 3 757 60226 1 0 0 chr3L 22549323 22555938 -1987619 + BLOOD_I LTR Gypsy 1 6613 0 3 757 3749 2 0 0 chr3L 22555938 22556337 -1987220 + BLOOD_LTR LTR Gypsy 1 399 0 3 757 248 227 25 74 chr3L 22557669 22557750 -1985807 - DNAREP1_DM LINE Penelope -104 490 414 3 757 253 197 0 0 chr3L 22559328 22559389 -1984168 - ROO_I LTR Pao -7520 736 676 3 757 26 50 0 0 chr3L 22564030 22564070 -1979487 + AT_rich Low_complexity Low_complexity 1 40 0 3 757 201 152 0 0 chr3L 22564713 22564746 -1978811 + (CAG)n Simple_repeat Simple_repeat 2 34 0 3 757 21 36 0 0 chr3L 22570171 22570199 -1973358 + AT_rich Low_complexity Low_complexity 1 28 0 3 757 43598 1 0 0 chr3L 22570776 22575495 -1968062 + DOC LINE Jockey 7 4725 0 3 757 27 49 0 0 chr3L 22575799 22575840 -1967717 + AT_rich Low_complexity Low_complexity 1 41 0 3 757 396 97 0 0 chr3L 22576267 22576329 -1967228 + (CTG)n Simple_repeat Simple_repeat 3 64 0 3 757 39 84 0 0 chr3L 22589612 22589707 -1953850 + AT_rich Low_complexity Low_complexity 1 95 0 3 757 24 32 0 0 chr3L 22593489 22593520 -1950037 + AT_rich Low_complexity Low_complexity 1 31 0 3 757 393 200 287 7 chr3L 22593604 22593740 -1949817 + DNAREP1_DM LINE Penelope 401 574 -20 3 757 29 0 0 0 chr3L 22597252 22597281 -1946276 + AT_rich Low_complexity Low_complexity 1 29 0 3 757 341 191 0 0 chr3L 22597364 22597432 -1946125 - DNAREP1_DM LINE Penelope 0 594 527 3 757 27 29 0 0 chr3L 22597786 22597820 -1945737 + AT_rich Low_complexity Low_complexity 1 34 0 3 757 50 51 0 0 chr3L 22597846 22597924 -1945633 + AT_rich Low_complexity Low_complexity 1 78 0 3 757 21 57 0 0 chr3L 22602650 22602685 -1940872 + AT_rich Low_complexity Low_complexity 1 35 0 3 757 355 187 43 32 chr3L 22602789 22602883 -1940674 + DNAREP1_DM LINE Penelope 20 114 -480 3 757 3730 0 0 5 chr3L 22610344 22610745 -1932812 - BLOOD_LTR LTR Gypsy 0 399 1 3 757 59923 1 0 0 chr3L 22610745 22617325 -1926232 - BLOOD_I LTR Gypsy 0 6613 32 3 757 3730 0 0 5 chr3L 22617338 22617739 -1925818 - BLOOD_LTR LTR Gypsy 0 399 1 3 757 21 0 0 0 chr3L 22625868 22625889 -1917668 + AT_rich Low_complexity Low_complexity 1 21 0 3 757 28 48 0 0 chr3L 22627869 22627911 -1915646 + AT_rich Low_complexity Low_complexity 1 42 0 3 757 237 33 0 0 chr3L 22628041 22628071 -1915486 + (T)n Simple_repeat Simple_repeat 1 30 0 3 757 595 106 42 126 chr3L 22632072 22632191 -1911366 + DNAREP1_DM LINE Penelope 1 109 -485 3 757 403 102 0 0 chr3L 22632194 22632253 -1911304 - DNAREP1_DM LINE Penelope 0 594 536 3 757 1702 147 36 22 chr3L 22632250 22632606 -1910951 - DNAREP1_DM LINE Penelope -109 485 3 3 757 22 0 0 0 chr3L 22632606 22632628 -1910929 + AT_rich Low_complexity Low_complexity 1 22 0 3 757 506 159 61 9 chr3L 22633253 22633367 -1910190 + DNAREP1_DM LINE Penelope 42 161 -433 3 757 305 210 24 24 chr3L 22633433 22633516 -1910041 + DNAREP1_DM LINE Penelope 10 92 -502 3 757 1094 139 152 9 chr3L 22633507 22633839 -1909718 - DNAREP1_DM LINE Penelope -258 336 1 3 757 684 180 39 0 chr3L 22633861 22633989 -1909568 + LINEJ1_DM LINE Jockey 3746 3878 -1142 3 757 749 232 50 20 chr3L 22634033 22634231 -1909326 + LINEJ1_DM LINE Jockey 4440 4643 -377 3 757 5247 26 0 0 chr3L 22634344 22634956 -1908601 - G4_DM LINE Jockey -1 3855 3244 3 757 225 0 0 0 chr3L 22659587 22659612 -1883945 + (CAGAA)n Simple_repeat Simple_repeat 1 25 0 3 757 186 103 0 0 chr3L 22660700 22660729 -1882828 + (CAGGA)n Simple_repeat Simple_repeat 4 32 0 3 757 212 288 17 0 chr3L 22672054 22672113 -1871444 + (CCCGAA)n Simple_repeat Simple_repeat 6 65 0 3 758 21 57 0 0 chr3L 22678004 22678039 -1865518 + AT_rich Low_complexity Low_complexity 1 35 0 3 758 21 0 0 0 chr3L 22681764 22681785 -1861772 + AT_rich Low_complexity Low_complexity 1 21 0 3 758 320 283 0 0 chr3L 22685420 22685519 -1858038 + (TGG)n Simple_repeat Simple_repeat 2 100 0 3 758 21 0 0 0 chr3L 22686124 22686145 -1857412 + AT_rich Low_complexity Low_complexity 1 21 0 3 758 590 176 264 0 chr3L 22686184 22686343 -1857214 - DNAREP1_DM LINE Penelope -8 586 386 3 758 310 295 0 0 chr3L 22686697 22686802 -1856755 + (TGG)n Simple_repeat Simple_repeat 2 106 0 3 758 40 21 0 0 chr3L 22687724 22687771 -1855786 + AT_rich Low_complexity Low_complexity 1 47 0 3 758 991 285 207 1 chr3L 22687970 22688446 -1855111 + BS2 LINE Jockey 4097 4560 -161 3 758 1258 144 114 20 chr3L 22688462 22688716 -1854841 + DNAREP1_DM LINE Penelope 117 394 -200 3 758 310 295 0 0 chr3L 22689156 22689261 -1854296 + (CCA)n Simple_repeat Simple_repeat 2 106 0 3 758 590 176 264 0 chr3L 22689615 22689774 -1853783 + DNAREP1_DM LINE Penelope 386 586 -8 3 758 21 0 0 0 chr3L 22689813 22689834 -1853723 + AT_rich Low_complexity Low_complexity 1 21 0 3 758 320 283 0 0 chr3L 22690439 22690538 -1853019 + (CCA)n Simple_repeat Simple_repeat 2 100 0 3 758 1658 122 248 5 chr3L 22691056 22691444 -1852113 + DNAREP1_DM LINE Penelope 94 575 -19 3 758 194 62 31 0 chr3L 22693565 22693597 -1849960 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 3 758 201 74 0 0 chr3L 22694298 22694325 -1849232 + (GGA)n Simple_repeat Simple_repeat 3 29 0 3 758 236 54 0 51 chr3L 22696260 22696299 -1847258 + (CATATA)n Simple_repeat Simple_repeat 5 41 0 3 758 180 0 0 0 chr3L 22696966 22696986 -1846571 + (T)n Simple_repeat Simple_repeat 1 20 0 3 758 189 74 0 0 chr3L 22699489 22699516 -1844041 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 3 758 314 132 94 0 chr3L 22700103 22700156 -1843401 + PROTOP_B DNA P 490 547 -606 3 758 25 31 0 0 chr3L 22700599 22700631 -1842926 + AT_rich Low_complexity Low_complexity 1 32 0 3 758 304 183 0 0 chr3L 22703527 22703587 -1839970 - DNAREP1_DM LINE Penelope 0 594 535 3 758 22 35 0 0 chr3L 22704388 22704417 -1839140 + AT_rich Low_complexity Low_complexity 1 29 0 3 758 24 32 0 0 chr3L 22710546 22710577 -1832980 + AT_rich Low_complexity Low_complexity 1 31 0 3 758 2868 97 157 16 chr3L 22713115 22713618 -1829939 + DNAREP1_DM LINE Penelope 1 574 -20 3 758 3123 27 0 8 chr3L 22713618 22713988 -1829569 - PROTOP DNA P 0 4480 4114 3 758 1817 41 0 14 chr3L 22713977 22714198 -1829359 - PROTOP DNA P -4263 217 1 3 758 298 95 0 0 chr3L 22715345 22715387 -1828170 - PROTOP DNA P -1 4479 4437 3 758 533 162 39 54 chr3L 22715394 22715524 -1828033 - PROTOP DNA P -164 4316 4189 3 758 247 200 221 0 chr3L 22715520 22715615 -1827942 - PROTOP DNA P -2896 1584 1469 3 758 326 176 20 66 chr3L 22715615 22715767 -1827790 - PROTOP DNA P -3790 690 546 3 758 507 186 21 0 chr3L 22715767 22715864 -1827693 - PROTOP DNA P -4292 188 90 3 758 1710 124 4 4 chr3L 22716001 22716258 -1827299 + DNAREP1_DM LINE Penelope 237 493 -101 3 758 2074 101 65 63 chr3L 22716258 22716671 -1826886 + DM297_LTR LTR Gypsy 1 414 0 3 758 653 75 54 36 chr3L 22716671 22716782 -1826775 + DNAREP1_DM LINE Penelope 482 594 0 3 758 47 19 0 0 chr3L 22717217 22717271 -1826286 + AT_rich Low_complexity Low_complexity 1 54 0 3 758 35 41 0 0 chr3L 22721051 22721100 -1822457 + AT_rich Low_complexity Low_complexity 1 49 0 3 758 390 105 415 0 chr3L 22730500 22730594 -1812963 - DNAREP1_DM LINE Penelope -459 135 3 3 758 272 213 0 16 chr3L 22736057 22736119 -1807438 + DNAREP1_DM LINE Penelope 2 62 -532 3 758 280 142 354 16 chr3L 22736129 22736256 -1807301 + DNAREP1_DM LINE Penelope 402 571 -23 3 758 201 258 10 41 chr3L 22736492 22736589 -1806968 + (TTG)n Simple_repeat Simple_repeat 1 94 0 3 758 9204 6 7 5 chr3L 22736670 22737759 -1805798 - FB4_DM DNA Tc1 0 4089 2998 3 758 37 52 0 0 chr3L 22737932 22737990 -1805567 + AT_rich Low_complexity Low_complexity 1 58 0 3 758 298 241 13 0 chr3L 22738013 22738092 -1805465 + DNAREP1_DM LINE Penelope 372 451 -143 3 758 26 50 0 0 chr3L 22738227 22738267 -1805290 + AT_rich Low_complexity Low_complexity 1 40 0 3 758 221 292 11 0 chr3L 22742952 22743041 -1800516 + (CAG)n Simple_repeat Simple_repeat 1 90 0 3 758 24 32 0 0 chr3L 22743763 22743794 -1799763 + AT_rich Low_complexity Low_complexity 1 31 0 3 758 896 197 73 50 chr3L 22743915 22744134 -1799423 - DNAREP1_DM LINE Penelope -1 593 370 3 758 286 136 0 0 chr3L 22744140 22744184 -1799373 - DNAREP1_DM LINE Penelope -550 44 1 3 758 3702 56 42 8 chr3L 22744305 22744830 -1798727 - FB4_DM DNA Tc1 -3546 543 1 3 758 180 77 0 0 chr3L 22746189 22746215 -1797342 + (A)n Simple_repeat Simple_repeat 1 26 0 3 758 30 27 0 0 chr3L 22746908 22746945 -1796612 + AT_rich Low_complexity Low_complexity 1 37 0 3 758 498 202 137 0 chr3L 22747005 22747129 -1796428 + DNAREP1_DM LINE Penelope 449 589 -5 3 758 365 45 0 0 chr3L 22749315 22749359 -1794198 - DNAREP1_DM LINE Penelope -550 44 1 3 758 609 172 16 0 chr3L 22752125 22752247 -1791310 - DNAREP1_DM LINE Penelope -470 124 1 3 758 23 0 0 0 chr3L 22753723 22753746 -1789811 + AT_rich Low_complexity Low_complexity 1 23 0 3 758 1379 144 148 70 chr3L 22753973 22754414 -1789143 + DNAREP1_DM LINE Penelope 1 594 0 3 758 48339 10 6 0 chr3L 22754545 22759914 -1783643 + IVK_DM LINE I 3 5402 0 3 758 284 0 28 0 chr3L 22761268 22761304 -1782253 + (TTA)n Simple_repeat Simple_repeat 3 39 0 3 758 25 31 0 0 chr3L 22766310 22766342 -1777215 + AT_rich Low_complexity Low_complexity 1 32 0 3 758 293 240 163 20 chr3L 22769222 22769320 -1774237 + DNAREP1_DM LINE Penelope 431 542 -52 3 758 387 119 206 87 chr3L 22769386 22769478 -1774079 + DNAREP1_DM LINE Penelope 423 525 -69 3 758 3710 91 59 18 chr3L 22773181 22773738 -1769819 - DNAREP1_DM LINE Penelope -3 591 12 3 758 267 206 15 31 chr3L 22779303 22779368 -1764189 - DNAREP1_DM LINE Penelope -141 453 390 3 758 274 267 44 15 chr3L 22779494 22779631 -1763926 - DNAREP1_DM LINE Penelope -453 141 1 3 758 200 125 0 59 chr3L 22779797 22779848 -1763709 + A-rich Low_complexity Low_complexity 1 48 0 3 758 27 0 0 0 chr3L 22781077 22781104 -1762453 + AT_rich Low_complexity Low_complexity 1 27 0 3 758 480 77 0 0 chr3L 22781214 22781279 -1762278 + (GAGAA)n Simple_repeat Simple_repeat 2 66 0 3 758 183 139 0 0 chr3L 22782775 22782811 -1760746 + (T)n Simple_repeat Simple_repeat 1 36 0 3 758 324 70 0 0 chr3L 22785282 22785325 -1758232 + (ATCTG)n Simple_repeat Simple_repeat 3 45 0 3 758 23 0 0 0 chr3L 22785749 22785772 -1757785 + AT_rich Low_complexity Low_complexity 1 23 0 3 758 23 54 0 0 chr3L 22789086 22789123 -1754434 + AT_rich Low_complexity Low_complexity 1 37 0 3 758 462 101 0 0 chr3L 22791392 22791461 -1752096 + (CTG)n Simple_repeat Simple_repeat 1 69 0 3 758 32 0 0 0 chr3L 22791710 22791742 -1751815 + AT_rich Low_complexity Low_complexity 1 32 0 3 758 222 37 0 0 chr3L 22794159 22794186 -1749371 + (CTG)n Simple_repeat Simple_repeat 1 27 0 3 758 29 28 0 0 chr3L 22795802 22795838 -1747719 + AT_rich Low_complexity Low_complexity 1 36 0 3 758 408 88 0 0 chr3L 22796808 22796865 -1746692 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 758 4480 4 0 0 chr3L 22796867 22797385 -1746172 + NOMAD_LTR LTR Gypsy 1 518 0 3 758 57355 1 1 1 chr3L 22797385 22803956 -1739601 + NOMAD_I LTR Gypsy 1 6572 0 3 758 4480 4 0 0 chr3L 22803956 22804474 -1739083 + NOMAD_LTR LTR Gypsy 1 518 0 3 758 1254 95 0 0 chr3L 22804477 22805017 -1738540 + (TA)n Simple_repeat Simple_repeat 1 540 0 3 758 566 276 45 26 chr3L 22805017 22805330 -1738227 + QUASIMODO_I LTR Gypsy 4142 4460 -1600 3 758 231 103 0 0 chr3L 22805331 22805370 -1738187 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 758 5595 1 6 0 chr3L 22805370 22806023 -1737534 + QUASIMODO_LTR LTR Gypsy 2 658 0 3 94 50573 3 0 0 chr3L 22806023 22812083 -1731474 + QUASIMODO_I LTR Gypsy 1 6060 0 3 759 5602 1 6 0 chr3L 22812083 22812737 -1730820 + QUASIMODO_LTR LTR Gypsy 1 658 0 3 759 29 0 0 0 chr3L 22812737 22812766 -1730791 + AT_rich Low_complexity Low_complexity 1 29 0 3 759 1334 138 69 93 chr3L 22812797 22813172 -1730385 - DNAREP1_DM LINE Penelope -228 366 1 3 759 231 276 0 0 chr3L 22822298 22822356 -1721201 + (CCCCAA)n Simple_repeat Simple_repeat 5 62 0 3 759 22 0 0 0 chr3L 22823301 22823323 -1720234 + GC_rich Low_complexity Low_complexity 1 22 0 3 759 22 0 0 0 chr3L 22824314 22824336 -1719221 + AT_rich Low_complexity Low_complexity 1 22 0 3 759 222 37 0 0 chr3L 22824414 22824441 -1719116 + (CATA)n Simple_repeat Simple_repeat 2 28 0 3 759 242 271 0 56 chr3L 22825857 22825982 -1717575 + T-rich Low_complexity Low_complexity 5 122 0 3 759 272 238 39 55 chr3L 22826111 22826293 -1717264 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 3 759 330 162 0 0 chr3L 22826401 22826475 -1717082 + (TTG)n Simple_repeat Simple_repeat 3 76 0 3 759 204 204 18 18 chr3L 22834002 22834057 -1709500 + (CAA)n Simple_repeat Simple_repeat 1 55 0 3 759 213 224 0 0 chr3L 22834245 22834294 -1709263 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 759 25 51 0 0 chr3L 22835416 22835455 -1708102 + AT_rich Low_complexity Low_complexity 1 39 0 3 759 2720 75 125 32 chr3L 22837833 22838318 -1705239 - DNAREP1_DM LINE Penelope -1 593 1 3 759 211 172 69 0 chr3L 22838734 22838792 -1704765 + (TATAA)n Simple_repeat Simple_repeat 3 64 0 3 759 545 148 28 0 chr3L 22838903 22839045 -1704512 + (TA)n Simple_repeat Simple_repeat 2 147 0 3 759 203 200 0 0 chr3L 22839512 22839547 -1704010 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 759 246 95 0 0 chr3L 22840708 22840750 -1702807 + (TTA)n Simple_repeat Simple_repeat 2 43 0 3 759 23 0 0 0 chr3L 22841651 22841674 -1701883 + AT_rich Low_complexity Low_complexity 1 23 0 3 759 269 81 0 0 chr3L 22841713 22841750 -1701807 - DNAREP1_DM LINE Penelope -557 37 1 3 759 26 36 0 51 chr3L 22841847 22841906 -1701651 + AT_rich Low_complexity Low_complexity 1 56 0 3 759 548 196 170 16 chr3L 22842768 22842950 -1700607 - DNAREP1_DM LINE Penelope -259 335 126 3 759 341 115 356 96 chr3L 22843570 22843685 -1699872 - DNAREP1_DM LINE Penelope -245 349 205 3 759 37 0 0 0 chr3L 22847229 22847266 -1696291 + AT_rich Low_complexity Low_complexity 1 37 0 3 759 1256 89 185 14 chr3L 22847292 22847508 -1696049 + DNAREP1_DM LINE Penelope 1 253 -341 3 759 22 0 0 0 chr3L 22847647 22847669 -1695888 + AT_rich Low_complexity Low_complexity 1 22 0 3 759 279 122 0 0 chr3L 22847815 22847864 -1695693 + (TTA)n Simple_repeat Simple_repeat 1 49 0 3 759 294 140 0 0 chr3L 22850659 22850709 -1692848 - DNAREP1_DM LINE Penelope -21 573 524 3 759 351 191 0 0 chr3L 22854490 22854553 -1689004 - DNAREP1_DM LINE Penelope -148 446 384 3 759 22 56 0 0 chr3L 22856603 22856639 -1686918 + AT_rich Low_complexity Low_complexity 1 36 0 3 759 21 57 0 0 chr3L 22858195 22858230 -1685327 + AT_rich Low_complexity Low_complexity 1 35 0 3 759 9787 1 0 5 chr3L 22859138 22860212 -1683345 - DOC LINE Jockey 0 4725 3657 3 759 21 0 0 0 chr3L 22861480 22861501 -1682056 + AT_rich Low_complexity Low_complexity 1 21 0 3 759 33 43 0 0 chr3L 22861667 22861714 -1681843 + AT_rich Low_complexity Low_complexity 1 47 0 3 759 208 219 0 0 chr3L 22861979 22862020 -1681537 + (CTG)n Simple_repeat Simple_repeat 2 42 0 3 759 568 149 215 7 chr3L 22868021 22868170 -1675387 + DNAREP1_DM LINE Penelope 415 594 0 3 759 21 0 0 0 chr3L 22871519 22871540 -1672017 + AT_rich Low_complexity Low_complexity 1 21 0 3 759 23 33 0 0 chr3L 22872260 22872290 -1671267 + AT_rich Low_complexity Low_complexity 1 30 0 3 759 226 91 111 22 chr3L 22875428 22875473 -1668084 + Gypsy11_LTR LTR Gypsy 6 54 -398 3 759 407 142 211 9 chr3L 22876501 22876615 -1666942 - DNAREP1_DM LINE Penelope -23 571 435 3 759 24 0 0 0 chr3L 22876729 22876753 -1666804 + AT_rich Low_complexity Low_complexity 1 24 0 3 759 204 45 43 43 chr3L 22876868 22876915 -1666642 + (TTTAA)n Simple_repeat Simple_repeat 5 51 0 3 759 30 27 0 0 chr3L 22877397 22877434 -1666123 + AT_rich Low_complexity Low_complexity 1 37 0 3 759 23 0 0 0 chr3L 22877494 22877517 -1666040 + AT_rich Low_complexity Low_complexity 1 23 0 3 759 781 129 7 103 chr3L 22877692 22877847 -1665710 - DNAREP1_DM LINE Penelope -91 503 364 3 759 1762 98 72 0 chr3L 22877856 22878120 -1665437 + DNAREP1_DM LINE Penelope 310 592 -2 3 759 1406 84 61 66 chr3L 22883688 22883916 -1659641 - DNAREP1_DM LINE Penelope 0 594 368 3 759 624 14 0 0 chr3L 22887375 22887448 -1656109 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 759 22 0 0 0 chr3L 22888622 22888644 -1654913 + AT_rich Low_complexity Low_complexity 1 22 0 3 759 212 190 0 23 chr3L 22890231 22890274 -1653283 + (CATA)n Simple_repeat Simple_repeat 2 43 0 3 759 33 66 0 0 chr3L 22894347 22894408 -1649149 + AT_rich Low_complexity Low_complexity 1 61 0 3 759 1384 137 113 93 chr3L 22898591 22898967 -1644590 - DNAREP1_DM LINE Penelope -4 590 73 3 759 398 111 16 0 chr3L 22899073 22899136 -1644421 - DMCR1A LINE CR1 -1406 3064 3001 3 759 1841 121 117 12 chr3L 22899145 22899480 -1644077 - DMCR1A LINE CR1 -1781 2689 2320 3 759 237 157 157 0 chr3L 22900306 22900357 -1643200 - DNAREP1_DM LINE Penelope -1 593 535 3 759 23 0 0 0 chr3L 22900471 22900494 -1643063 + AT_rich Low_complexity Low_complexity 1 23 0 3 759 302 284 86 29 chr3L 22900772 22900982 -1642575 + I_DM LINE I 4585 4806 -1425 3 759 22 0 0 0 chr3L 22901021 22901043 -1642514 + AT_rich Low_complexity Low_complexity 1 22 0 3 759 186 43 0 0 chr3L 22901165 22901188 -1642369 + (GAGAA)n Simple_repeat Simple_repeat 2 24 0 3 759 847 76 112 53 chr3L 22901434 22901586 -1641971 + DNAREP1_DM LINE Penelope 92 252 -342 3 759 259 173 58 0 chr3L 22901585 22901637 -1641920 + DNAREP1_DM LINE Penelope 153 207 -387 3 759 814 41 0 0 chr3L 22901648 22901745 -1641812 + DNAREP1_DM LINE Penelope 498 594 0 3 759 343 149 0 75 chr3L 22901743 22901823 -1641734 - Transib-N1_DM DNA Transib -440 74 1 3 759 417 216 60 0 chr3L 22901745 22901760 -1641797 - P_DG DNA P -27 2857 2739 3 759 33 43 0 0 chr3L 22903153 22903200 -1640357 + AT_rich Low_complexity Low_complexity 1 47 0 3 759 681 116 88 18 chr3L 22905436 22905550 -1638007 - DNAREP1_DM LINE Penelope -22 572 451 3 759 614 199 253 5 chr3L 22905566 22905784 -1637773 - DNAREP1_DM LINE Penelope -309 285 14 3 759 319 256 0 13 chr3L 22906398 22906477 -1637080 + (CAG)n Simple_repeat Simple_repeat 1 78 0 3 759 23 0 0 0 chr3L 22907801 22907824 -1635733 + AT_rich Low_complexity Low_complexity 1 23 0 3 759 1441 160 109 51 chr3L 22908901 22909406 -1634151 - DNAREP1_DM LINE Penelope 0 594 1 3 759 226 71 0 0 chr3L 22913870 22913898 -1629659 - DNAREP1_DM LINE Penelope 0 594 567 3 759 27 62 0 0 chr3L 22918658 22918706 -1624851 + AT_rich Low_complexity Low_complexity 1 48 0 3 759 1072 103 65 5 chr3L 22925673 22925859 -1617698 + DNAREP1_DM LINE Penelope 126 322 -272 3 759 1352 202 86 49 chr3L 22925887 22926445 -1617112 + DNAREP1_DM LINE Penelope 90 594 0 3 759 1173 81 3 0 chr3L 22926445 22926730 -1616827 + (TAA)n Simple_repeat Simple_repeat 1 285 0 3 759 21 89 0 0 chr3L 22931094 22931150 -1612407 + AT_rich Low_complexity Low_complexity 1 56 0 3 759 1024 101 7 0 chr3L 22931501 22931650 -1611907 + DNAREP1_DM LINE Penelope 5 154 -440 3 759 1587 158 25 50 chr3L 22931699 22932031 -1611526 + DNAREP1_DM LINE Penelope 149 445 -149 3 759 6652 78 23 10 chr3L 22932022 22932936 -1610621 - DMCR1A LINE CR1 -20 4450 3525 3 759 359 214 162 10 chr3L 22933173 22933272 -1610285 - DNAREP1_DM LINE Penelope -480 114 1 3 759 225 197 132 0 chr3L 22933747 22933823 -1609734 - DNAREP1_DM LINE Penelope -327 267 182 3 759 647 155 83 51 chr3L 22935124 22935280 -1608277 + DNAREP1_DM LINE Penelope 2 162 -432 3 759 307 191 31 31 chr3L 22935281 22935346 -1608211 + DNAREP1_DM LINE Penelope 373 437 -157 3 759 1641 101 48 41 chr3L 22935858 22936126 -1607431 - DNAREP1_DM LINE Penelope -15 579 310 3 759 344 123 0 88 chr3L 22936126 22936206 -1607351 - MDG1_I LTR Gypsy -2784 3812 3740 3 94 1526 149 155 127 chr3L 22937105 22937634 -1605923 - DNAREP1_DM LINE Penelope 0 594 83 3 760 637 156 40 16 chr3L 22937629 22937753 -1605804 - DNAREP1_DM LINE Penelope -466 128 2 3 760 337 91 36 18 chr3L 22937762 22937818 -1605739 + DNAREP1_DM LINE Penelope 1 57 -537 3 760 294 275 12 12 chr3L 22938226 22938307 -1605250 + (TATG)n Simple_repeat Simple_repeat 1 81 0 3 760 231 209 0 0 chr3L 22939063 22939106 -1604451 + (CATA)n Simple_repeat Simple_repeat 4 46 0 3 760 201 39 0 0 chr3L 22941184 22941210 -1602347 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 760 23 0 0 0 chr3L 22941329 22941352 -1602205 + AT_rich Low_complexity Low_complexity 1 23 0 3 760 26 30 0 0 chr3L 22942342 22942375 -1601182 + AT_rich Low_complexity Low_complexity 1 33 0 3 760 36 23 0 0 chr3L 22943221 22943264 -1600293 + AT_rich Low_complexity Low_complexity 1 43 0 3 760 243 88 0 0 chr3L 22943680 22943714 -1599843 + (CAA)n Simple_repeat Simple_repeat 2 35 0 3 760 1583 195 109 31 chr3L 22946908 22947403 -1596154 - DNAREP1_DM LINE Penelope 0 594 125 3 760 23 0 0 0 chr3L 22948582 22948605 -1594952 + AT_rich Low_complexity Low_complexity 1 23 0 3 760 1790 132 173 17 chr3L 22948784 22949251 -1594306 + DNAREP1_DM LINE Penelope 1 592 -2 3 760 24 32 0 0 chr3L 22949265 22949296 -1594261 + AT_rich Low_complexity Low_complexity 1 31 0 3 760 27 29 0 0 chr3L 22949508 22949542 -1594015 + AT_rich Low_complexity Low_complexity 1 34 0 3 760 218 109 21 42 chr3L 22949562 22949610 -1593947 + (TATAA)n Simple_repeat Simple_repeat 3 49 0 3 760 1077 174 167 28 chr3L 22950700 22951109 -1592448 + DNAREP1_DM LINE Penelope 20 375 -219 3 760 30 45 0 0 chr3L 22952785 22952829 -1590728 + AT_rich Low_complexity Low_complexity 1 44 0 3 760 538 157 29 0 chr3L 22956054 22956156 -1587401 + DNAREP1_DM LINE Penelope 169 273 -321 3 760 1146 69 63 0 chr3L 22956163 22956322 -1587235 + DNAREP1_DM LINE Penelope 417 585 -9 3 760 1180 151 296 91 chr3L 22958881 22959374 -1584183 - DNAREP1_DM LINE Penelope 0 594 1 3 760 21 0 0 0 chr3L 22961009 22961030 -1582527 + AT_rich Low_complexity Low_complexity 1 21 0 3 760 230 132 0 0 chr3L 22961034 22961072 -1582485 - DNAREP1_DM LINE Penelope 0 594 557 3 760 1386 63 11 5 chr3L 22961074 22961265 -1582292 - DNAREP1_DM LINE Penelope -402 192 1 3 760 1390 119 64 0 chr3L 22961834 22962052 -1581505 + DNAREP1_DM LINE Penelope 363 594 0 3 760 244 125 0 20 chr3L 22962153 22962202 -1581355 - DNAREP1_DM LINE Penelope -345 249 202 3 760 53 17 0 0 chr3L 22963834 22963894 -1579663 + AT_rich Low_complexity Low_complexity 1 60 0 3 760 21 0 0 0 chr3L 22963927 22963948 -1579609 + AT_rich Low_complexity Low_complexity 1 21 0 3 760 521 177 52 26 chr3L 22964467 22964583 -1578974 - DNAREP1_DM LINE Penelope 0 594 476 3 760 22 0 0 0 chr3L 22965116 22965138 -1578419 + AT_rich Low_complexity Low_complexity 1 22 0 3 760 277 218 71 18 chr3L 22965286 22965398 -1578159 - DNAREP1_DM LINE Penelope -454 140 23 3 760 43 20 0 0 chr3L 22965508 22965558 -1577999 + AT_rich Low_complexity Low_complexity 1 50 0 3 760 598 121 0 0 chr3L 22965615 22965706 -1577851 + DNAREP1_DM LINE Penelope 503 593 -1 3 760 301 178 0 61 chr3L 22965766 22965832 -1577725 - DNAREP1_DM LINE Penelope -532 62 1 3 760 269 175 34 34 chr3L 22965858 22965917 -1577640 - DNAREP1_DM LINE Penelope -512 82 24 3 760 482 162 287 0 chr3L 22966533 22966669 -1576888 - DNAREP1_DM LINE Penelope -419 175 1 3 760 313 257 40 34 chr3L 22966702 22966851 -1576706 + P_DG DNA P 2739 2888 0 3 760 782 115 154 37 chr3L 22966719 22966881 -1576676 - DNAREP1_DM LINE Penelope 0 594 414 3 760 338 162 58 152 chr3L 22966871 22967009 -1576548 + DNAREP1_DM LINE Penelope 22 146 -448 3 760 1009 186 5 5 chr3L 22967002 22967197 -1576360 + DNAREP1_DM LINE Penelope 293 487 -107 3 760 871 126 59 7 chr3L 22969229 22969381 -1574176 + DNAREP1_DM LINE Penelope 189 348 -246 3 760 31 0 0 0 chr3L 22969710 22969741 -1573816 + AT_rich Low_complexity Low_complexity 1 31 0 3 760 1938 102 53 0 chr3L 22969741 22970044 -1573513 - BS2 LINE Jockey 0 4721 4403 3 760 1347 33 139 0 chr3L 22970047 22970227 -1573330 + G5_DM LINE Jockey 503 707 -4149 3 760 1228 192 66 34 chr3L 22970278 22970664 -1572893 - DNAREP1_DM LINE Penelope -179 415 129 3 760 35 0 0 0 chr3L 22971033 22971068 -1572489 + AT_rich Low_complexity Low_complexity 1 35 0 3 760 282 135 0 37 chr3L 22973822 22973876 -1569681 + DNAREP1_DM LINE Penelope 1 52 -542 3 760 255 125 231 15 chr3L 22973857 22973922 -1569635 + DNAREP1_DM LINE Penelope 513 591 -3 3 760 2081 155 29 63 chr3L 22973923 22974399 -1569158 - DM297_I LTR Gypsy -1740 4427 3968 3 760 378 187 0 0 chr3L 22974397 22974472 -1569085 - DM297_I LTR Gypsy -2401 3766 3692 3 760 624 168 22 162 chr3L 22974493 22974678 -1568879 - DM297_I LTR Gypsy -2705 3462 3304 3 760 445 148 0 12 chr3L 22974676 22974758 -1568799 - DM297_I LTR Gypsy -5249 918 838 3 760 343 172 0 0 chr3L 22974749 22974813 -1568744 - DM297_I LTR Gypsy -5460 707 644 3 760 2175 97 96 8 chr3L 22975606 22975960 -1567597 + DNAREP1_DM LINE Penelope 210 594 0 3 760 314 220 174 0 chr3L 22975842 22975974 -1567583 - P_DG DNA P -4 2884 2730 3 760 308 160 0 0 chr3L 22976178 22976228 -1567329 - DNAREP1_DM LINE Penelope -151 443 394 3 760 1366 113 210 0 chr3L 22976275 22976523 -1567034 - DNAREP1_DM LINE Penelope -8 586 287 3 760 183 42 0 0 chr3L 22976525 22976549 -1567008 + (TTTAA)n Simple_repeat Simple_repeat 4 27 0 3 760 768 123 0 0 chr3L 22976551 22976665 -1566892 - DNAREP1_DM LINE Penelope -480 114 1 3 760 706 199 128 5 chr3L 22977293 22977480 -1566077 + DNAREP1_DM LINE Penelope 382 591 -3 3 760 375 211 168 109 chr3L 22978076 22978278 -1565279 + DMRP1 Unknown Unknown 125 338 -8 3 760 50 0 0 0 chr3L 22979296 22979346 -1564211 + AT_rich Low_complexity Low_complexity 1 50 0 3 760 475 138 181 0 chr3L 22979421 22979515 -1564042 - DNAREP1_DM LINE Penelope -105 489 379 3 760 1312 85 0 19 chr3L 22979528 22979743 -1563814 - S_DM DNA Tc1 0 1736 1526 3 760 180 0 0 0 chr3L 22979745 22979765 -1563792 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 760 426 193 500 5 chr3L 22979787 22979978 -1563579 - DNAREP1_DM LINE Penelope -301 293 8 3 760 22 0 0 0 chr3L 22981472 22981494 -1562063 + AT_rich Low_complexity Low_complexity 1 22 0 3 760 369 231 0 0 chr3L 22981520 22981598 -1561959 + Jockey2 LINE Jockey 2874 2951 -477 3 760 276 206 287 14 chr3L 22981629 22981772 -1561785 + LINEJ1_DM LINE Jockey 4616 4797 -223 3 760 3523 5 7 7 chr3L 22983016 22983430 -1560127 + DM297_LTR LTR Gypsy 1 414 0 3 760 41260 55 9 4 chr3L 22983430 22989521 -1554036 + DM297_I LTR Gypsy 1 6420 0 3 760 3523 5 7 7 chr3L 22989519 22989933 -1553624 + DM297_LTR LTR Gypsy 1 414 0 3 760 822 98 187 18 chr3L 22990709 22990993 -1552564 - DNAREP1_DM LINE Penelope -262 332 1 3 760 208 139 0 0 chr3L 22991765 22991801 -1551756 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 3 760 225 365 7 28 chr3L 22992042 22992183 -1551374 + (CATATA)n Simple_repeat Simple_repeat 3 140 0 3 760 23 78 0 0 chr3L 22992522 22992573 -1550984 + AT_rich Low_complexity Low_complexity 1 51 0 3 760 1718 192 114 58 chr3L 22992802 22993337 -1550220 - DNAREP1_DM LINE Penelope 0 594 30 3 760 493 169 78 173 chr3L 22993629 22993808 -1549749 + DNAREP1_DM LINE Penelope 392 553 -41 3 760 226 283 17 0 chr3L 22993833 22993893 -1549664 + DNAREP1_DM LINE Penelope 12 72 -522 3 760 1023 23 84 8 chr3L 22994038 22994169 -1549388 + FB4_DM DNA Tc1 1 141 -3948 3 760 2167 103 292 17 chr3L 22994234 22994787 -1548770 + FB4_DM DNA Tc1 3424 4089 0 3 760 394 225 0 29 chr3L 22994890 22994995 -1548562 + DNAREP1_DM LINE Penelope 339 440 -154 3 760 1585 182 88 61 chr3L 22995592 22996048 -1547509 + DNAREP1_DM LINE Penelope 127 594 0 3 760 347 245 29 48 chr3L 22996769 22996872 -1546685 - DNAREP1_DM LINE Penelope -490 104 4 3 760 563 89 429 13 chr3L 22997255 22997416 -1546141 - DNAREP1_DM LINE Penelope -366 228 1 3 760 661 165 151 12 chr3L 22997414 22997580 -1545977 + DNAREP1_DM LINE Penelope 167 355 -239 3 760 444 152 353 11 chr3L 22997579 22997712 -1545845 + DNAREP1_DM LINE Penelope 431 593 -1 3 760 901 106 0 7 chr3L 22997790 22997932 -1545625 - DNAREP1_DM LINE Penelope -453 141 1 3 760 422 324 36 36 chr3L 22998739 22999040 -1544517 - Gypsy12_I LTR Gypsy -162 5384 5084 3 760 624 332 31 37 chr3L 22999070 22999381 -1544176 - Gypsy12_I LTR Gypsy -1440 4106 3798 3 760 1236 125 244 9 chr3L 22999381 22999698 -1543859 - DNAREP1_DM LINE Penelope 0 594 204 3 760 1313 149 38 19 chr3L 22999686 22999952 -1543605 - DNAREP1_DM LINE Penelope -320 274 4 3 760 36 62 0 0 chr3L 23000138 23000202 -1543355 + AT_rich Low_complexity Low_complexity 1 64 0 3 760 1668 136 75 13 chr3L 23001668 23001974 -1541583 - DNAREP1_DM LINE Penelope 0 594 270 3 760 278 59 0 0 chr3L 23001983 23002017 -1541540 - DNAREP1_DM LINE Penelope -560 34 1 3 760 26 0 0 0 chr3L 23003540 23003566 -1539991 + AT_rich Low_complexity Low_complexity 1 26 0 3 760 28 29 0 0 chr3L 23003595 23003630 -1539927 + AT_rich Low_complexity Low_complexity 1 35 0 3 760 22 56 0 0 chr3L 23003714 23003750 -1539807 + AT_rich Low_complexity Low_complexity 1 36 0 3 760 281 204 0 0 chr3L 23005559 23005613 -1537944 - DNAREP1_DM LINE Penelope -137 457 404 3 760 22 56 0 0 chr3L 23006826 23006862 -1536695 + AT_rich Low_complexity Low_complexity 1 36 0 3 760 22 35 0 0 chr3L 23007421 23007450 -1536107 + AT_rich Low_complexity Low_complexity 1 29 0 3 760 39 0 0 0 chr3L 23009724 23009763 -1533794 + AT_rich Low_complexity Low_complexity 1 39 0 3 760 1970 126 15 6 chr3L 23009784 23010112 -1533445 - DMCR1A LINE CR1 -224 4246 3916 3 760 443 158 386 0 chr3L 23010111 23010282 -1533275 - DNAREP1_DM LINE Penelope -292 302 66 3 760 1129 163 104 16 chr3L 23010285 23010535 -1533022 - DMCR1A LINE CR1 -2091 2379 2108 3 760 2015 151 188 25 chr3L 23010535 23011131 -1532426 - DMCR1A LINE CR1 -3284 1186 431 3 760 1088 162 296 3 chr3L 23011141 23011469 -1532088 - DNAREP1_DM LINE Penelope -34 560 137 3 760 306 243 14 0 chr3L 23014118 23014192 -1529365 - DNAREP1_DM LINE Penelope -103 491 417 3 760 472 189 56 9 chr3L 23014572 23014679 -1528878 - DNAREP1_DM LINE Penelope -481 113 2 3 760 24 32 0 0 chr3L 23015028 23015059 -1528498 + AT_rich Low_complexity Low_complexity 1 31 0 3 760 33 0 0 0 chr3L 23015157 23015190 -1528367 + AT_rich Low_complexity Low_complexity 1 33 0 3 760 490 216 16 82 chr3L 23015466 23015647 -1527910 - DNAREP1_DM LINE Penelope -337 257 89 3 760 2626 118 33 17 chr3L 23015647 23016345 -1527212 + DNAREP1_DM LINE Penelope 3 594 0 3 760 625 102 0 0 chr3L 23016343 23016431 -1527126 - DNAREP1_DM LINE Penelope -505 89 2 3 760 390 163 168 58 chr3L 23016607 23016744 -1526813 - DNAREP1_DM LINE Penelope -342 252 101 3 760 672 133 104 0 chr3L 23016759 23016894 -1526663 - DNAREP1_DM LINE Penelope -445 149 1 3 760 23 54 0 0 chr3L 23017980 23018017 -1525540 + AT_rich Low_complexity Low_complexity 1 37 0 3 760 21 57 0 0 chr3L 23018224 23018259 -1525298 + AT_rich Low_complexity Low_complexity 1 35 0 3 760 231 226 0 0 chr3L 23019328 23019381 -1524176 + T-rich Low_complexity Low_complexity 1 53 0 3 760 339 274 68 31 chr3L 23020051 23020213 -1523344 - BLASTOPIA_I LTR Gypsy -709 3772 3605 3 760 34 0 0 0 chr3L 23020691 23020725 -1522832 + AT_rich Low_complexity Low_complexity 1 34 0 3 760 257 137 98 0 chr3L 23020756 23020807 -1522750 + DNAREP1_DM LINE Penelope 260 315 -279 3 760 3534 146 178 18 chr3L 23020889 23021868 -1521689 + DMCR1A LINE CR1 645 1842 -2628 3 760 435 160 0 0 chr3L 23021883 23021956 -1521601 + DMCR1A LINE CR1 2163 2235 -2235 3 760 369 61 0 0 chr3L 23021956 23022005 -1521552 - DNAREP1_DM LINE Penelope 0 594 546 3 760 1182 89 0 0 chr3L 23022001 23022170 -1521387 - DNAREP1_DM LINE Penelope -423 171 3 3 760 728 70 102 25 chr3L 23022172 23022290 -1521267 + DMCR1A LINE CR1 2331 2457 -2013 3 760 22 35 0 0 chr3L 23022534 23022563 -1520994 + AT_rich Low_complexity Low_complexity 1 29 0 3 760 29 0 0 0 chr3L 23022814 23022843 -1520714 + AT_rich Low_complexity Low_complexity 1 29 0 3 760 21 71 0 0 chr3L 23023511 23023553 -1520004 + AT_rich Low_complexity Low_complexity 1 42 0 3 760 319 216 66 38 chr3L 23025397 23025503 -1518054 - G_DM LINE Jockey -321 4025 3917 3 760 532 250 160 10 chr3L 23025502 23025748 -1517809 - G_DM LINE Jockey -467 3879 3660 3 760 390 133 16 19 chr3L 23025755 23025827 -1517730 - G_DM LINE Jockey -1208 3138 3076 3 760 24 32 0 0 chr3L 23027588 23027619 -1515938 + AT_rich Low_complexity Low_complexity 1 31 0 3 760 292 264 11 11 chr3L 23027735 23027823 -1515734 - DNAREP1_DM LINE Penelope -2 592 505 3 760 214 73 23 47 chr3L 23027899 23027942 -1515615 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 3 760 1572 94 77 0 chr3L 23028436 23028671 -1514886 + DNAREP1_DM LINE Penelope 342 594 0 3 760 1557 115 288 66 chr3L 23029136 23029528 -1514029 - DNAREP1_DM LINE Penelope -1 593 115 3 760 1098 88 92 23 chr3L 23029524 23029698 -1513859 + DNAREP1_DM LINE Penelope 409 594 0 3 760 30 59 0 0 chr3L 23029938 23029989 -1513568 + AT_rich Low_complexity Low_complexity 1 51 0 3 760 23 78 0 0 chr3L 23030854 23030905 -1512652 + AT_rich Low_complexity Low_complexity 1 51 0 3 760 38 0 0 0 chr3L 23031453 23031491 -1512066 + AT_rich Low_complexity Low_complexity 1 38 0 3 760 3193 53 6 64 chr3L 23032321 23032788 -1510769 + G5A_DM LINE Jockey 2400 2839 -2 3 760 292 306 55 45 chr3L 23033357 23033581 -1509976 + G4_DM LINE Jockey 2028 2239 -1617 3 760 920 172 162 8 chr3L 23033668 23033902 -1509655 + DNAREP1_DM LINE Penelope 141 410 -184 3 760 505 129 59 10 chr3L 23034079 23034181 -1509376 + DNAREP1_DM LINE Penelope 219 325 -269 3 760 359 81 160 140 chr3L 23034210 23034310 -1509247 + DNAREP1_DM LINE Penelope 426 527 -67 3 760 32 0 0 0 chr3L 23034315 23034347 -1509210 + AT_rich Low_complexity Low_complexity 1 32 0 3 760 262 321 130 22 chr3L 23034565 23034934 -1508623 - MDG3_I LTR Gypsy -2401 2585 2177 3 760 1828 108 16 60 chr3L 23035380 23035696 -1507861 + Gypsy6A_LTR LTR Gypsy 1 302 -118 3 760 36 23 0 0 chr3L 23035923 23035966 -1507591 + AT_rich Low_complexity Low_complexity 1 43 0 3 760 16941 266 11 9 chr3L 23036274 23040597 -1502960 + Gypsy6_I LTR Gypsy 987 5318 -1694 3 760 22 0 0 0 chr3L 23040606 23040628 -1502929 + AT_rich Low_complexity Low_complexity 1 22 0 3 760 3580 292 7 7 chr3L 23040641 23041701 -1501856 + Gypsy6_I LTR Gypsy 5952 7011 -1 3 760 1737 108 16 75 chr3L 23041704 23042025 -1501532 + Gypsy6A_LTR LTR Gypsy 1 302 -118 3 760 668 197 14 7 chr3L 23042194 23042342 -1501215 - DMCR1A LINE CR1 -275 4195 4047 3 760 2825 99 86 104 chr3L 23042348 23042932 -1500625 + DNAREP1_DM LINE Penelope 20 592 -2 3 760 380 139 83 0 chr3L 23042933 23043005 -1500552 - DMCR1A LINE CR1 -423 4047 3970 3 760 608 14 0 0 chr3L 23042999 23043069 -1500488 + DMCR1A LINE CR1 1132 1201 -3269 3 760 23 0 0 0 chr3L 23043344 23043367 -1500190 + AT_rich Low_complexity Low_complexity 1 23 0 3 760 15322 31 15 2 chr3L 23043453 23045458 -1498099 + DMCR1A LINE CR1 1194 3346 -1124 3 760 2973 25 82 0 chr3L 23045502 23045870 -1497687 + DMCR1A LINE CR1 3437 3834 -636 3 760 3130 31 123 0 chr3L 23045865 23046279 -1497278 + DMCR1A LINE CR1 4006 4470 0 3 760 434 48 63 0 chr3L 23046338 23046401 -1497156 + DMCR1A LINE CR1 4404 4470 0 3 760 344 158 0 0 chr3L 23046410 23046467 -1497090 - DMCR1A LINE CR1 -528 3942 3886 3 760 2770 122 293 1 chr3L 23046468 23047310 -1496247 - DMCR1A LINE CR1 -773 3697 2612 3 760 260 164 284 0 chr3L 23047493 23047560 -1495997 - R1_DM LINE R1 -1 5355 5270 3 760 1809 215 70 25 chr3L 23047573 23048055 -1495502 - R1_DM LINE R1 -258 5098 4595 3 760 1350 188 60 5 chr3L 23048107 23048512 -1495045 - DNAREP1_DM LINE Penelope -259 335 1 3 760 3355 66 28 16 chr3L 23049085 23049273 -1494284 - TRANSIB3 DNA Transib -28 2855 2667 3 760 228 35 0 0 chr3L 23049273 23049302 -1494255 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 760 3355 66 28 16 chr3L 23049302 23049608 -1493949 - TRANSIB3 DNA Transib -217 2666 2356 3 760 1195 89 0 0 chr3L 23049607 23049776 -1493781 - TRANSIB3 DNA Transib -1281 1602 1434 3 760 1197 34 54 0 chr3L 23049774 23049922 -1493635 - TRANSIB3 DNA Transib -1571 1312 1157 3 760 3478 53 162 11 chr3L 23049922 23050524 -1493033 - TRANSIB3 DNA Transib -1858 1025 333 3 760 6034 307 65 12 chr3L 23050579 23053086 -1490471 - NINJA_I LTR Pao -1322 4689 2048 3 760 961 334 55 25 chr3L 23053198 23053951 -1489606 - NINJA_I LTR Pao -4110 1901 1099 3 760 9363 18 4 3 chr3L 23054674 23055778 -1487779 + PROTOP_A DNA P 1 1105 0 3 760 317 19 407 0 chr3L 23056081 23056135 -1487422 - TRANSIB3 DNA Transib -2807 76 1 3 760 257 197 0 15 chr3L 23056203 23056270 -1487287 + (TTA)n Simple_repeat Simple_repeat 1 66 0 3 760 25 0 0 0 chr3L 23057270 23057295 -1486262 + AT_rich Low_complexity Low_complexity 1 25 0 3 760 508 299 9 9 chr3L 23057852 23058094 -1485463 + Gypsy4_I LTR Gypsy 868 1051 -3626 3 760 788 257 24 24 chr3L 23058123 23058445 -1485112 + Gypsy4_I LTR Gypsy 2845 3153 -3135 3 760 8606 15 35 3 chr3L 23058449 23059520 -1484037 - PROTOP_A DNA P 0 1105 1 3 760 446 296 111 5 chr3L 23059520 23059719 -1483838 + Gypsy4_I LTR Gypsy 3165 3385 -2903 3 760 1248 322 40 25 chr3L 23059717 23060827 -1482730 + Gypsy4_I LTR Gypsy 3577 4541 -1594 3 760 574 298 42 44 chr3L 23060902 23061319 -1482238 + Gypsy4_I LTR Gypsy 4919 5289 -999 3 760 30 45 0 0 chr3L 23061366 23061410 -1482147 + AT_rich Low_complexity Low_complexity 1 44 0 3 760 21 0 0 0 chr3L 23061930 23061951 -1481606 + AT_rich Low_complexity Low_complexity 1 21 0 3 760 21 0 0 0 chr3L 23062001 23062022 -1481535 + AT_rich Low_complexity Low_complexity 1 21 0 3 760 963 97 94 25 chr3L 23062833 23063034 -1480523 - FB4_DM DNA Tc1 -1321 2768 2554 3 760 1032 159 9 46 chr3L 23063032 23063249 -1480308 - FB4_DM DNA Tc1 -1729 2360 2152 3 760 2606 108 138 8 chr3L 23063248 23063777 -1479780 - FB4_DM DNA Tc1 -2385 1704 1107 3 760 21 57 0 0 chr3L 23063927 23063962 -1479595 + AT_rich Low_complexity Low_complexity 1 35 0 3 760 4325 109 45 50 chr3L 23064052 23064930 -1478627 + Mariner2_DM DNA Tc1 1 912 0 3 760 3582 14 25 105 chr3L 23065383 23065934 -1477623 - DM176_LTR LTR Gypsy 0 507 1 3 760 2632 6 73 0 chr3L 23065934 23066276 -1477281 - DM176_I LTR Gypsy 0 6420 6054 3 11 47800 11 9 2 chr3L 23066250 23071608 -1471949 - DM176_I LTR Gypsy -520 5900 502 3 761 181 30 29 57 chr3L 23071608 23071643 -1471914 + (TTA)n Simple_repeat Simple_repeat 3 36 0 3 761 47800 11 9 2 chr3L 23071643 23072139 -1471418 - DM176_I LTR Gypsy -5919 501 1 3 761 2020 20 16 0 chr3L 23072139 23072392 -1471165 - DM176_LTR LTR Gypsy 0 507 251 3 761 2184 11 0 78 chr3L 23072393 23072700 -1470857 - DM176_LTR LTR Gypsy -224 283 1 3 761 1679 58 46 0 chr3L 23073525 23073765 -1469792 - S2_DM DNA Tc1 -542 1193 943 3 761 1545 42 362 18 chr3L 23073765 23074355 -1469202 - PROTOP_B DNA P 0 1153 358 3 761 839 34 99 33 chr3L 23074369 23074520 -1469037 - S2_DM DNA Tc1 -1574 161 1 3 761 681 140 0 0 chr3L 23074554 23074690 -1468867 + (AATAG)n Simple_repeat Simple_repeat 1 136 0 3 761 26 0 0 0 chr3L 23074731 23074757 -1468800 + AT_rich Low_complexity Low_complexity 1 26 0 3 761 978 105 216 0 chr3L 23074869 23075050 -1468507 - DNAREP1_DM LINE Penelope -166 428 209 3 761 209 133 53 0 chr3L 23076598 23076673 -1466884 + (TA)n Simple_repeat Simple_repeat 1 79 0 3 761 378 72 107 134 chr3L 23076674 23076786 -1466771 + DNAREP1_DM LINE Penelope 58 166 -428 3 761 6024 72 39 37 chr3L 23076767 23077755 -1465802 + PROTOP_A DNA P 116 1104 -1 3 761 671 84 131 0 chr3L 23077755 23077861 -1465696 + DNAREP1_DM LINE Penelope 447 566 -28 3 761 793 150 0 0 chr3L 23078175 23078308 -1465249 + DNAREP1_DM LINE Penelope 307 439 -155 3 761 5568 57 5 22 chr3L 23078383 23079201 -1464356 - FW3_DM LINE Jockey -518 3443 2427 3 761 3422 47 13 0 chr3L 23079206 23079653 -1463904 - FW3_DM LINE Jockey -1001 2131 1679 3 761 308 49 0 0 chr3L 23079644 23079685 -1463872 - FW3_DM LINE Jockey -2377 755 715 3 761 863 29 0 0 chr3L 23079700 23079805 -1463752 - FW3_DM LINE Jockey -1283 1849 1745 3 761 514 59 0 0 chr3L 23079800 23079868 -1463689 - FW3_DM LINE Jockey -1994 1138 1071 3 761 937 205 51 16 chr3L 23079875 23080277 -1463280 - FW3_DM LINE Jockey -3006 126 1 3 761 1945 180 17 12 chr3L 23080262 23080679 -1462878 - DOC4_DM LINE Jockey -2346 445 27 3 761 24 32 0 0 chr3L 23080699 23080730 -1462827 + AT_rich Low_complexity Low_complexity 1 31 0 3 761 25 51 0 0 chr3L 23081483 23081522 -1462035 + AT_rich Low_complexity Low_complexity 1 39 0 3 761 946 177 43 24 chr3L 23081727 23081981 -1461576 + DNAREP1_DM LINE Penelope 85 343 -251 3 761 6592 74 37 78 chr3L 23082419 23083622 -1459935 - PROTOP_B DNA P 0 1153 1 3 761 331 165 129 0 chr3L 23085604 23085689 -1457868 - DIVER2_I LTR Pao -3151 996 901 3 761 300 267 0 0 chr3L 23086018 23086093 -1457464 - DIVER2_I LTR Pao -3635 512 438 3 761 22 35 0 0 chr3L 23087541 23087570 -1455987 + AT_rich Low_complexity Low_complexity 1 29 0 3 761 21 36 0 0 chr3L 23088408 23088436 -1455121 + AT_rich Low_complexity Low_complexity 1 28 0 3 761 6719 72 80 10 chr3L 23089380 23090442 -1453115 - S2_DM DNA Tc1 -599 1136 1 3 761 514 188 21 14 chr3L 23090751 23090891 -1452666 + MINOS DNA Tc1 313 453 -1322 3 761 271 60 0 39 chr3L 23090893 23090945 -1452612 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 3 761 242 91 0 0 chr3L 23090949 23090982 -1452575 - S_DM DNA Tc1 0 1736 1704 3 761 9752 98 12 14 chr3L 23090966 23092511 -1451046 - S_DM DNA Tc1 -194 1542 1 3 761 26 82 0 0 chr3L 23093252 23093313 -1450244 + AT_rich Low_complexity Low_complexity 1 61 0 3 761 25 31 0 0 chr3L 23093726 23093758 -1449799 + AT_rich Low_complexity Low_complexity 1 32 0 3 761 22 56 0 0 chr3L 23094704 23094740 -1448817 + AT_rich Low_complexity Low_complexity 1 36 0 3 761 21 57 0 0 chr3L 23094778 23094813 -1448744 + AT_rich Low_complexity Low_complexity 1 35 0 3 761 28 29 0 0 chr3L 23096622 23096657 -1446900 + AT_rich Low_complexity Low_complexity 1 35 0 3 761 1445 164 196 21 chr3L 23096748 23097171 -1446386 + PROTOP DNA P 1 499 -3981 3 761 26 30 0 0 chr3L 23097200 23097233 -1446324 + AT_rich Low_complexity Low_complexity 1 33 0 3 761 23 68 0 0 chr3L 23097307 23097351 -1446206 + AT_rich Low_complexity Low_complexity 1 44 0 3 761 628 187 223 7 chr3L 23097436 23097723 -1445834 + PROTOP DNA P 4127 4479 -1 3 761 653 277 14 0 chr3L 23097785 23097998 -1445559 - OSVALDO_I LTR Gypsy -6007 646 431 3 761 681 129 53 8 chr3L 23098821 23098954 -1444603 - Gypsy8_LTR LTR Gypsy -98 206 68 3 761 7015 28 124 5 chr3L 23099232 23100206 -1443351 - G4_DM LINE Jockey 0 3856 2767 3 761 6308 28 36 42 chr3L 23100216 23101103 -1442454 - G4_DM LINE Jockey -1216 2640 1759 3 761 3339 24 14 0 chr3L 23101113 23101529 -1442028 + DMCR1A LINE CR1 2923 3344 -1126 3 761 8136 28 34 0 chr3L 23101551 23102574 -1440983 + DMCR1A LINE CR1 3411 4468 -2 3 761 383 194 0 108 chr3L 23102732 23102871 -1440686 + DM297_I LTR Gypsy 104 227 -5940 3 761 183 42 0 0 chr3L 23102897 23102921 -1440636 + (A)n Simple_repeat Simple_repeat 1 24 0 3 761 337 211 0 0 chr3L 23102971 23103042 -1440515 + DM297_I LTR Gypsy 454 524 -5643 3 761 945 53 12 122 chr3L 23104033 23104205 -1439352 - DMCR1A LINE CR1 0 4470 4318 3 761 44396 8 8 1 chr3L 23105693 23106585 -1436972 + R1_DM LINE R1 1 896 -4460 3 761 210 71 0 0 chr3L 23106585 23106613 -1436944 + (CCG)n Simple_repeat Simple_repeat 1 28 0 3 761 44396 8 8 1 chr3L 23106613 23110991 -1432566 + R1_DM LINE R1 897 5307 -49 3 761 252 89 89 0 chr3L 23111151 23111196 -1432361 - DNAREP1_DM LINE Penelope -149 445 397 3 761 29 0 0 0 chr3L 23111383 23111412 -1432145 + AT_rich Low_complexity Low_complexity 1 29 0 3 761 1193 148 67 34 chr3L 23111754 23111992 -1431565 - DNAREP1_DM LINE Penelope -16 578 333 3 761 2591 39 0 12 chr3L 23112057 23112395 -1431162 + DMCR1A LINE CR1 1 334 -4136 3 761 23685 29 4 0 chr3L 23112393 23115164 -1428393 + DMCR1A LINE CR1 566 3346 -1124 3 761 2869 36 82 0 chr3L 23115184 23115548 -1428009 + DMCR1A LINE CR1 3411 3804 -666 3 761 572 198 0 0 chr3L 23115578 23115689 -1427868 - DNAREP1_DM LINE Penelope -361 233 123 3 761 409 131 0 0 chr3L 23115714 23115775 -1427782 - DNAREP1_DM LINE Penelope -533 61 1 3 761 1575 45 0 19 chr3L 23115855 23116061 -1427496 - ROOA_LTR LTR Pao 0 386 185 3 761 315 175 175 0 chr3L 23116455 23116535 -1427022 - DNAREP1_DM LINE Penelope -34 560 467 3 761 189 74 0 0 chr3L 23116660 23116687 -1426870 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 761 864 174 62 162 chr3L 23116826 23117134 -1426423 + HOBO DNA hAT 1 277 -2739 3 761 38 0 0 0 chr3L 23117167 23117205 -1426352 + AT_rich Low_complexity Low_complexity 1 38 0 3 761 23 0 0 0 chr3L 23117222 23117245 -1426312 + AT_rich Low_complexity Low_complexity 1 23 0 3 761 834 205 62 90 chr3L 23117265 23117608 -1425949 - Gypsy8_LTR LTR Gypsy -3 301 1 3 761 408 200 10 10 chr3L 23117621 23117722 -1425835 + HOBO DNA hAT 2915 3015 -1 3 761 1874 118 18 68 chr3L 23117958 23118341 -1425216 - FB4_DM DNA Tc1 -1370 2719 2356 3 761 1220 155 141 0 chr3L 23118331 23118608 -1424949 - FB4_DM DNA Tc1 -2661 1428 1113 3 761 33 25 0 0 chr3L 23119505 23119545 -1424012 + AT_rich Low_complexity Low_complexity 1 40 0 3 761 30 0 0 0 chr3L 23120629 23120659 -1422898 + AT_rich Low_complexity Low_complexity 1 30 0 3 761 351 167 0 0 chr3L 23121508 23121568 -1421989 + DNAREP1_DM LINE Penelope 2 61 -533 3 761 772 114 8 15 chr3L 23121585 23121719 -1421838 + DNAREP1_DM LINE Penelope 141 273 -321 3 761 771 94 327 21 chr3L 23121733 23121935 -1421622 + DNAREP1_DM LINE Penelope 331 594 0 3 761 3499 143 19 0 chr3L 23121950 23122537 -1421020 + FB4_DM DNA Tc1 1942 2539 -1550 3 761 610 130 30 22 chr3L 23122549 23122683 -1420874 + FB4_DM DNA Tc1 2622 2756 -1333 3 761 1262 71 0 29 chr3L 23122685 23122860 -1420697 - DNAREP1_DM LINE Penelope -104 490 321 3 761 4249 52 53 8 chr3L 23122858 23123465 -1420092 + PROTOP_B DNA P 504 1137 -16 3 761 278 61 0 0 chr3L 23123470 23123503 -1420054 - DNAREP1_DM LINE Penelope -542 52 20 3 761 26 50 0 0 chr3L 23124170 23124210 -1419347 + AT_rich Low_complexity Low_complexity 1 40 0 3 761 2152 50 125 13 chr3L 23125480 23125783 -1417774 + Mariner2_DM DNA Tc1 97 433 -479 3 761 2426 84 105 22 chr3L 23126190 23126590 -1416967 + Mariner2_DM DNA Tc1 479 911 -1 3 761 2357 138 10 25 chr3L 23127174 23127582 -1415975 - GTWIN_LTR LTR Gypsy -93 402 1 3 761 397 262 109 16 chr3L 23127818 23127946 -1415611 + DIVER2_I LTR Pao 741 880 -3267 3 761 8428 60 12 3 chr3L 23128440 23129566 -1413991 + PROTOP_B DNA P 1 1137 -16 3 761 278 61 0 0 chr3L 23129571 23129604 -1413953 - DNAREP1_DM LINE Penelope -542 52 20 3 761 26 50 0 0 chr3L 23130271 23130311 -1413246 + AT_rich Low_complexity Low_complexity 1 40 0 3 761 2152 50 125 13 chr3L 23131581 23131884 -1411673 + Mariner2_DM DNA Tc1 97 433 -479 3 761 2426 84 105 22 chr3L 23132291 23132691 -1410866 + Mariner2_DM DNA Tc1 479 911 -1 3 761 2357 138 10 25 chr3L 23133275 23133683 -1409874 - GTWIN_LTR LTR Gypsy -93 402 1 3 761 397 262 109 16 chr3L 23133919 23134047 -1409510 + DIVER2_I LTR Pao 741 880 -3267 3 761 9575 14 0 1 chr3L 23134541 23135647 -1407910 + PROTOP_A DNA P 1 1105 0 3 761 2359 145 19 28 chr3L 23135983 23136410 -1407147 + Invader1_LTR LTR Gypsy 1 423 0 3 761 27 0 0 0 chr3L 23136718 23136745 -1406812 + AT_rich Low_complexity Low_complexity 1 27 0 3 761 228 246 0 0 chr3L 23137514 23137575 -1405982 - MAX_LTR LTR Pao -259 62 2 3 761 1976 168 297 11 chr3L 23138110 23138676 -1404881 - DMCR1A LINE CR1 -2529 1941 1214 3 761 7276 51 10 1 chr3L 23139648 23140684 -1402873 + PROTOP_B DNA P 56 1134 -19 3 761 206 241 0 0 chr3L 23140769 23140823 -1402734 + T-rich Low_complexity Low_complexity 1 54 0 3 761 52 0 0 0 chr3L 23140952 23141004 -1402553 + AT_rich Low_complexity Low_complexity 1 52 0 3 761 25 0 0 0 chr3L 23143679 23143704 -1399853 + AT_rich Low_complexity Low_complexity 1 25 0 3 761 316 201 12 8 chr3L 23143930 23143996 -1399561 + DNAREP1_DM LINE Penelope 432 489 -105 3 761 3350 42 22 2 chr3L 23143996 23144407 -1399150 - Gypsy6A_LTR LTR Gypsy 0 420 2 3 761 1787 324 25 17 chr3L 23144410 23145125 -1398432 - Gypsy6_I LTR Gypsy 0 7012 6292 3 761 1476 238 128 0 chr3L 23145208 23145607 -1397950 - Gypsy6_I LTR Gypsy -2491 4521 4072 3 761 999 245 5 0 chr3L 23145611 23145819 -1397738 - Gypsy3_I LTR Gypsy -2866 3311 3103 3 761 4032 283 35 6 chr3L 23145815 23146973 -1396584 - Gypsy6_I LTR Gypsy -3647 3365 1508 3 761 1806 295 72 38 chr3L 23147007 23147781 -1395776 - Gypsy6_I LTR Gypsy -4937 2075 1275 3 761 2991 47 44 10 chr3L 23148065 23148454 -1395103 - Gypsy6A_LTR LTR Gypsy 0 420 19 3 761 27 0 0 0 chr3L 23148687 23148714 -1394843 + AT_rich Low_complexity Low_complexity 1 27 0 3 761 1434 182 274 22 chr3L 23148942 23149427 -1394130 + Gypsy8_I LTR Gypsy 1824 2430 -1917 3 761 1836 176 144 44 chr3L 23149424 23150014 -1393543 + Gypsy8_I LTR Gypsy 2603 3251 -1096 3 761 581 37 136 0 chr3L 23150100 23150181 -1393376 - DNAREP1_DM LINE Penelope 0 594 503 3 761 586 118 9 35 chr3L 23150180 23150294 -1393263 - DNAREP1_DM LINE Penelope -380 214 104 3 761 5942 0 0 0 chr3L 23150297 23150955 -1392602 - QUASIMODO_LTR LTR Gypsy 0 658 1 3 761 52525 3 1 2 chr3L 23150955 23157025 -1386532 - QUASIMODO_I LTR Gypsy 0 6060 1 3 761 5923 1 0 0 chr3L 23157025 23157683 -1385874 - QUASIMODO_LTR LTR Gypsy 0 658 1 3 761 733 89 0 10 chr3L 23157689 23157791 -1385766 - DNAREP1_DM LINE Penelope -493 101 1 3 761 1086 153 11 5 chr3L 23157817 23158008 -1385549 + HOBO DNA hAT 1 192 -2824 3 761 792 171 105 77 chr3L 23158090 23158299 -1385258 + HOBO DNA hAT 194 408 -2608 3 761 339 125 56 0 chr3L 23158289 23158361 -1385196 + HOBO DNA hAT 2337 2412 -604 3 761 49 18 0 0 chr3L 23158361 23158417 -1385140 + AT_rich Low_complexity Low_complexity 1 56 0 3 761 1933 149 184 57 chr3L 23158441 23158968 -1384589 + HOBO DNA hAT 2422 3015 -1 3 761 253 83 0 0 chr3L 23159029 23159065 -1384492 + DNAREP1_DM LINE Penelope 457 492 -102 3 761 5942 0 0 0 chr3L 23159065 23159723 -1383834 - QUASIMODO_LTR LTR Gypsy 0 658 1 3 761 52525 3 1 2 chr3L 23159723 23165793 -1377764 - QUASIMODO_I LTR Gypsy 0 6060 1 3 761 5942 0 0 0 chr3L 23165793 23166451 -1377106 - QUASIMODO_LTR LTR Gypsy 0 658 1 3 761 21 0 0 0 chr3L 23166451 23166472 -1377085 + AT_rich Low_complexity Low_complexity 1 21 0 3 761 496 127 180 36 chr3L 23166572 23166711 -1376846 + DNAREP1_DM LINE Penelope 143 301 -293 3 761 670 125 54 0 chr3L 23166774 23166886 -1376671 + DNAREP1_DM LINE Penelope 477 594 0 3 761 472 196 0 10 chr3L 23167089 23167192 -1376365 - DNAREP1_DM LINE Penelope -492 102 1 3 761 25 0 0 0 chr3L 23167914 23167939 -1375618 + AT_rich Low_complexity Low_complexity 1 25 0 3 761 1797 102 108 3 chr3L 23168124 23168448 -1375109 - DNAREP1_DM LINE Penelope -72 522 165 3 761 866 90 0 22 chr3L 23168549 23168686 -1374871 + DNAREP1_DM LINE Penelope 1 134 -460 3 761 661 83 215 0 chr3L 23168691 23168812 -1374745 + DNAREP1_DM LINE Penelope 428 574 -20 3 761 236 0 0 0 chr3L 23169158 23169185 -1374372 + DNAREP1_DM LINE Penelope 568 594 0 3 761 300 91 0 0 chr3L 23169354 23169398 -1374159 + DNAREP1_DM LINE Penelope 510 553 -41 3 761 799 141 178 0 chr3L 23169505 23169696 -1373861 + DNAREP1_DM LINE Penelope 40 264 -330 3 761 3804 31 114 0 chr3L 23169715 23170450 -1373107 - DMCR1A LINE CR1 0 4470 3652 3 761 2050 31 19 0 chr3L 23170454 23170715 -1372842 - DMCR1A LINE CR1 -1241 3229 2964 3 761 4375 28 2 0 chr3L 23170710 23171243 -1372314 - DMCR1A LINE CR1 -2064 2406 1873 3 761 2113 37 355 0 chr3L 23171254 23171819 -1371738 - DMCR1A LINE CR1 -3360 1110 344 3 761 1713 39 0 13 chr3L 23171815 23172052 -1371505 - DMCR1A LINE CR1 -4236 234 1 3 761 797 107 0 51 chr3L 23172055 23172193 -1371364 + DNAREP1_DM LINE Penelope 342 472 -122 3 761 562 13 158 0 chr3L 23172238 23172314 -1371243 + PROTOP_A DNA P 1 88 -1017 3 761 11469 18 10 5 chr3L 23172314 23173742 -1369815 - M4DM DNA Transib 0 1435 1 3 761 8285 22 0 3 chr3L 23173742 23174767 -1368790 + PROTOP_A DNA P 84 1105 0 3 761 359 240 0 65 chr3L 23177411 23177518 -1366039 + DNAREP1_DM LINE Penelope 362 461 -133 3 761 374 181 221 0 chr3L 23177639 23177766 -1365791 - DNAREP1_DM LINE Penelope -238 356 202 3 761 24 67 0 0 chr3L 23178432 23178477 -1365080 + AT_rich Low_complexity Low_complexity 1 45 0 3 761 281 195 84 12 chr3L 23179187 23179270 -1364287 - Gypsy8_LTR LTR Gypsy -148 156 68 3 761 362 168 290 0 chr3L 23179415 23179553 -1364004 + DNAREP1_DM LINE Penelope 408 585 -9 3 761 924 181 159 59 chr3L 23179581 23179939 -1363618 + DNAREP1_DM LINE Penelope 199 592 -2 3 761 929 301 41 41 chr3L 23180628 23181064 -1362493 - DIVER2_I LTR Pao -2 4145 3710 3 761 269 227 0 15 chr3L 23181713 23181780 -1361777 - DIVER2_I LTR Pao -2313 1834 1769 3 761 23 54 0 0 chr3L 23182061 23182098 -1361459 + AT_rich Low_complexity Low_complexity 1 37 0 3 761 27 29 0 0 chr3L 23182546 23182580 -1360977 + AT_rich Low_complexity Low_complexity 1 34 0 3 761 935 149 106 9 chr3L 23182801 23183018 -1360539 - DNAREP1_DM LINE Penelope -142 452 215 3 761 226 319 0 11 chr3L 23184002 23184094 -1359463 - TV1I LTR Gypsy -4999 964 874 3 761 1915 127 121 36 chr3L 23184406 23184937 -1358620 - DNAREP1_DM LINE Penelope 0 594 86 3 761 329 174 0 0 chr3L 23185019 23185088 -1358469 - ROO_I LTR Pao -2371 5885 5817 3 761 682 246 232 7 chr3L 23185116 23185530 -1358027 - Stalker2_I LTR Gypsy -509 5827 5321 3 761 549 198 261 28 chr3L 23186059 23186412 -1357145 - Stalker2_I LTR Gypsy -2003 5399 5008 3 761 2440 234 122 8 chr3L 23186405 23187317 -1356240 - Stalker2_I LTR Gypsy -2624 4778 3763 3 761 699 190 97 154 chr3L 23187372 23187794 -1355763 + Gypsy3_LTR LTR Gypsy 1 398 0 3 761 244 239 48 71 chr3L 23188618 23188744 -1354813 - Stalker2_I LTR Gypsy -5524 1878 1756 3 761 306 261 18 9 chr3L 23188735 23188847 -1354710 - MDG1_I LTR Gypsy -5161 1435 1323 3 761 965 101 267 44 chr3L 23189157 23189587 -1353970 - DNAREP1_DM LINE Penelope 0 594 1 3 761 430 272 139 4 chr3L 23189566 23189817 -1353740 - Copia_I LTR Copia -508 4085 3801 3 761 931 279 113 9 chr3L 23189912 23190479 -1353078 - Copia_I LTR Copia -2405 2188 1563 3 761 1251 0 0 0 chr3L 23191125 23191268 -1352289 - Invader1_LTR LTR Gypsy 0 423 281 3 761 1032 31 0 0 chr3L 23191279 23191406 -1352151 - Invader1_LTR LTR Gypsy -296 127 1 3 761 385 151 21 11 chr3L 23191793 23191887 -1351670 - ROO_I LTR Pao -8056 200 106 3 761 485 179 123 25 chr3L 23191936 23192103 -1351454 + DNAREP1_DM LINE Penelope 117 304 -290 3 761 14007 4 0 0 chr3L 23192134 23193779 -1349778 + G6_DM LINE Jockey 1 1645 -397 3 761 1261 19 0 0 chr3L 23193777 23193937 -1349620 + G6_DM LINE Jockey 1883 2042 0 3 761 432 127 51 0 chr3L 23193955 23194034 -1349523 + DNAREP1_DM LINE Penelope 349 431 -163 3 761 14039 38 27 1 chr3L 23194047 23195851 -1347706 + DMCR1A LINE CR1 8 1858 -2612 3 761 12403 29 5 3 chr3L 23195847 23197390 -1346167 + DMCR1A LINE CR1 1984 3529 -941 3 761 723 178 11 40 chr3L 23197375 23197551 -1346006 + DNAREP1_DM LINE Penelope 283 453 -141 3 761 271 202 12 37 chr3L 23198093 23198175 -1345382 + DNAREP1_DM LINE Penelope 436 515 -79 3 761 283 125 0 0 chr3L 23198575 23198623 -1344934 - DNAREP1_DM LINE Penelope -53 541 494 3 761 548 96 148 37 chr3L 23198846 23198954 -1344603 - DNAREP1_DM LINE Penelope -57 537 418 3 761 43 20 0 0 chr3L 23199213 23199263 -1344294 + AT_rich Low_complexity Low_complexity 1 50 0 3 762 763 116 289 35 chr3L 23200460 23200788 -1342769 - DNAREP1_DM LINE Penelope -130 464 1 3 762 352 109 0 35 chr3L 23201269 23201326 -1342231 + DMCR1A LINE CR1 3828 3882 -588 3 762 3189 71 39 0 chr3L 23201327 23201789 -1341768 - DMCR1A LINE CR1 -1659 2811 2332 3 762 1136 60 108 0 chr3L 23201784 23201950 -1341607 - DMCR1A LINE CR1 -3030 1440 1257 3 762 1490 67 0 28 chr3L 23201949 23202165 -1341392 - DMCR1A LINE CR1 -3463 1007 798 3 762 764 56 0 18 chr3L 23202151 23202260 -1341297 - DMCR1A LINE CR1 -3843 627 521 3 762 788 197 26 18 chr3L 23202408 23202746 -1340811 + DNAREP1_DM LINE Penelope 90 332 -262 3 762 846 92 288 7 chr3L 23202757 23203047 -1340510 + DNAREP1_DM LINE Penelope 208 578 -16 3 762 10036 60 12 4 chr3L 23204309 23205747 -1337810 - HELENA_RT LINE Jockey 0 1317 7 3 762 436 204 5 156 chr3L 23205822 23206008 -1337549 - BS LINE Jockey -3642 1484 1327 3 762 25 65 0 0 chr3L 23206982 23207028 -1336529 + AT_rich Low_complexity Low_complexity 1 46 0 3 762 319 134 224 0 chr3L 23207119 23207186 -1336371 - DNAREP1_DM LINE Penelope -512 82 1 3 762 234 243 153 42 chr3L 23207182 23207397 -1336160 - MDG1_I LTR Gypsy -6236 360 122 3 762 412 176 328 0 chr3L 23207699 23207830 -1335727 - MDG1_I LTR Gypsy -2378 4218 4045 3 762 838 137 37 6 chr3L 23207862 23208024 -1335533 - MDG1_I LTR Gypsy -2801 3795 3629 3 762 469 199 40 61 chr3L 23208802 23209000 -1334557 - Gypsy_LTR LTR Gypsy -157 325 132 3 762 23 0 0 0 chr3L 23209000 23209023 -1334534 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 288 158 9 2 chr3L 23209306 23209376 -1334181 + DNAREP1_DM LINE Penelope 117 175 -419 3 762 896 124 126 3 chr3L 23209413 23209696 -1333861 + DNAREP1_DM LINE Penelope 129 486 -108 3 762 563 194 38 28 chr3L 23209817 23210007 -1333550 + DNAREP1_DM LINE Penelope 44 366 -228 3 762 21 36 0 0 chr3L 23210263 23210291 -1333266 + AT_rich Low_complexity Low_complexity 1 28 0 3 762 299 191 119 0 chr3L 23210673 23210757 -1332800 - Transib-N1_DM DNA Transib -399 115 22 3 762 323 143 43 0 chr3L 23210809 23210879 -1332678 + DNAREP1_DM LINE Penelope 493 565 -29 3 762 489 104 52 0 chr3L 23211491 23211568 -1331989 - DNAREP1_DM LINE Penelope -225 369 289 3 762 1076 178 149 0 chr3L 23211867 23212176 -1331381 - DNAREP1_DM LINE Penelope -239 355 1 3 762 615 110 71 11 chr3L 23212780 23212907 -1330650 + DM297_LTR LTR Gypsy 279 470 -4 3 762 334 132 129 29 chr3L 23212951 23213021 -1330536 + BS2 LINE Jockey 242 318 -4403 3 762 22 0 0 0 chr3L 23213054 23213076 -1330481 + AT_rich Low_complexity Low_complexity 1 22 0 3 762 1691 103 26 0 chr3L 23213076 23213348 -1330209 - BS2 LINE Jockey 0 4721 4443 3 762 1506 290 124 7 chr3L 23213681 23214407 -1329150 + BS2 LINE Jockey 601 1411 -3310 3 762 22364 48 11 0 chr3L 23214455 23217341 -1326216 + BS2 LINE Jockey 1799 4715 -6 3 762 200 59 0 29 chr3L 23217341 23217376 -1326181 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 3 762 387 138 182 11 chr3L 23217840 23217928 -1325629 + DMRP1 Unknown Unknown 28 130 -216 3 762 1290 91 62 22 chr3L 23218904 23219130 -1324427 + DNAREP1_DM LINE Penelope 1 235 -359 3 762 2498 148 48 1 chr3L 23219132 23219672 -1323885 + DNAREP1_DM LINE Penelope 127 594 0 3 762 22 56 0 0 chr3L 23219685 23219721 -1323836 + AT_rich Low_complexity Low_complexity 1 36 0 3 762 359 162 0 0 chr3L 23219795 23219869 -1323688 + DNAREP1_DM LINE Penelope 97 170 -424 3 762 1413 129 193 23 chr3L 23219898 23220388 -1323169 + DNAREP1_DM LINE Penelope 141 594 0 3 762 385 171 0 0 chr3L 23220392 23220468 -1323089 + DMRP1 Unknown Unknown 233 308 -38 3 762 21 0 0 0 chr3L 23220664 23220685 -1322872 + AT_rich Low_complexity Low_complexity 1 21 0 3 762 314 231 67 9 chr3L 23221522 23221627 -1321930 - DNAREP1_DM LINE Penelope -108 486 376 3 762 676 284 84 50 chr3L 23222176 23222535 -1321022 - DIVER2_I LTR Pao -2401 1746 1376 3 762 536 316 27 8 chr3L 23223998 23224256 -1319301 - STALKER4_I LTR Gypsy -1920 4610 4348 3 762 1247 135 135 0 chr3L 23224331 23224464 -1319093 + DNAREP1_DM LINE Penelope 295 430 -164 3 762 195 129 0 0 chr3L 23224464 23224495 -1319062 + (CGGA)n Simple_repeat Simple_repeat 4 34 0 3 762 1247 135 135 0 chr3L 23224495 23224590 -1318967 + DNAREP1_DM LINE Penelope 431 552 -42 3 762 49 0 0 0 chr3L 23225074 23225123 -1318434 + AT_rich Low_complexity Low_complexity 1 49 0 3 762 23 0 0 0 chr3L 23225363 23225386 -1318171 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 227 297 0 0 chr3L 23226233 23226324 -1317233 - TV1I LTR Gypsy -1861 4102 4012 3 762 23 0 0 0 chr3L 23226933 23226956 -1316601 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 8086 45 53 1 chr3L 23226982 23228043 -1315514 - S2_DM DNA Tc1 -619 1116 1 3 762 1418 261 6 6 chr3L 23228279 23228633 -1314924 - DIVER2_I LTR Pao -223 3924 3571 3 762 994 135 22 108 chr3L 23228739 23228971 -1314586 - DMLTR5 LTR Gypsy 0 266 55 3 762 1234 322 92 21 chr3L 23229827 23230535 -1313022 - DIVER2_I LTR Pao -1754 2393 1636 3 762 230 318 12 12 chr3L 23230895 23230981 -1312576 - DIVER2_I LTR Pao -2955 1192 1107 3 762 38 39 0 0 chr3L 23232238 23232290 -1311267 + AT_rich Low_complexity Low_complexity 1 52 0 3 762 28 79 0 0 chr3L 23232712 23232775 -1310782 + AT_rich Low_complexity Low_complexity 1 63 0 3 762 21 57 0 0 chr3L 23232858 23232893 -1310664 + AT_rich Low_complexity Low_complexity 1 35 0 3 762 27 0 0 0 chr3L 23232909 23232936 -1310621 + AT_rich Low_complexity Low_complexity 1 27 0 3 762 33 0 0 0 chr3L 23233138 23233171 -1310386 + AT_rich Low_complexity Low_complexity 1 33 0 3 762 23 0 0 0 chr3L 23233782 23233805 -1309752 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 8247 38 14 30 chr3L 23235015 23236138 -1307419 + PROTOP_A DNA P 1 1105 0 3 762 339 328 73 31 chr3L 23236475 23236802 -1306755 - DIVER_I LTR Pao -2675 2968 2628 3 762 334 269 27 54 chr3L 23239184 23239333 -1304224 + DNAREP1_DM LINE Penelope 279 423 -171 3 762 321 222 36 36 chr3L 23239345 23239429 -1304128 + DNAREP1_DM LINE Penelope 502 585 -9 3 762 28 61 0 0 chr3L 23239898 23239947 -1303610 + AT_rich Low_complexity Low_complexity 1 49 0 3 762 1161 162 5 5 chr3L 23241138 23241343 -1302214 - DNAREP1_DM LINE Penelope -198 396 192 3 762 363 200 0 0 chr3L 23241368 23241438 -1302119 - DNAREP1_DM LINE Penelope -522 72 3 3 762 22 0 0 0 chr3L 23241485 23241507 -1302050 + AT_rich Low_complexity Low_complexity 1 22 0 3 762 435 136 0 0 chr3L 23242001 23242067 -1301490 - PROTOP_B DNA P 0 1153 1088 3 762 577 149 20 60 chr3L 23242138 23242288 -1301269 - PROTOP_B DNA P -729 424 281 3 762 180 0 0 0 chr3L 23242354 23242374 -1301183 + (TATG)n Simple_repeat Simple_repeat 2 21 0 3 762 201 147 0 0 chr3L 23242546 23242580 -1300977 + (TATG)n Simple_repeat Simple_repeat 3 36 0 3 762 52 17 0 0 chr3L 23242663 23242722 -1300835 + AT_rich Low_complexity Low_complexity 1 59 0 3 762 264 182 18 0 chr3L 23243567 23243622 -1299935 - PROTOP_B DNA P -1091 62 7 3 762 229 279 19 37 chr3L 23244183 23244291 -1299266 - DNAREP1_DM LINE Penelope -403 191 86 3 762 256 293 24 24 chr3L 23244657 23244741 -1298816 + FW2_DM LINE Jockey 1229 1312 -2649 3 762 344 225 161 9 chr3L 23245230 23245342 -1298215 + DNAREP1_DM LINE Penelope 439 567 -27 3 762 1942 129 114 11 chr3L 23245724 23246076 -1297481 - DNAREP1_DM LINE Penelope 0 594 207 3 762 206 208 0 40 chr3L 23248681 23248731 -1294826 + A-rich Low_complexity Low_complexity 3 50 0 3 762 43 0 0 0 chr3L 23248735 23248778 -1294779 + AT_rich Low_complexity Low_complexity 1 43 0 3 762 21 0 0 0 chr3L 23248837 23248858 -1294699 + AT_rich Low_complexity Low_complexity 1 21 0 3 762 23 86 0 0 chr3L 23249099 23249157 -1294400 + AT_rich Low_complexity Low_complexity 1 58 0 3 762 192 125 0 0 chr3L 23249308 23249340 -1294217 + (TCTA)n Simple_repeat Simple_repeat 3 34 0 3 762 526 276 0 0 chr3L 23249449 23249583 -1293974 + G5_DM LINE Jockey 3418 3551 -1305 3 762 488 223 57 7 chr3L 23249871 23250011 -1293546 + DNAREP1_DM LINE Penelope 448 594 0 3 762 256 152 22 0 chr3L 23250029 23250075 -1293482 + DNAREP1_DM LINE Penelope 548 594 0 3 762 24 0 0 0 chr3L 23250387 23250411 -1293146 + AT_rich Low_complexity Low_complexity 1 24 0 3 762 622 328 71 8 chr3L 23251380 23251734 -1291823 - G5_DM LINE Jockey -260 4596 4221 3 762 515 290 55 14 chr3L 23251775 23251995 -1291562 - G5_DM LINE Jockey -714 4142 3914 3 762 780 330 22 18 chr3L 23252000 23252625 -1290932 - G5_DM LINE Jockey -1645 3211 2886 3 762 832 298 22 8 chr3L 23252685 23252952 -1290605 - G5_DM LINE Jockey -2231 2625 2355 3 762 331 266 117 14 chr3L 23253095 23253240 -1290317 - G5_DM LINE Jockey -2829 2027 1868 3 762 406 300 181 16 chr3L 23253384 23253698 -1289859 - G5_DM LINE Jockey -3193 1663 1298 3 762 389 55 0 83 chr3L 23253845 23253905 -1289652 + DNAREP1_DM LINE Penelope 1 55 -539 3 762 1035 141 15 45 chr3L 23253904 23254212 -1289345 + DNAREP1_DM LINE Penelope 117 332 -262 3 762 1253 122 87 76 chr3L 23254483 23254923 -1288634 + DNAREP1_DM LINE Penelope 24 559 -35 3 762 379 258 120 8 chr3L 23254936 23255061 -1288496 + DNAREP1_DM LINE Penelope 319 457 -137 3 762 43 56 0 0 chr3L 23255658 23255729 -1287828 + AT_rich Low_complexity Low_complexity 1 71 0 3 762 1201 179 132 27 chr3L 23256464 23256798 -1286759 + DNAREP1_DM LINE Penelope 1 369 -225 3 762 22 35 0 0 chr3L 23257094 23257123 -1286434 + AT_rich Low_complexity Low_complexity 1 29 0 3 762 27 62 0 0 chr3L 23257271 23257319 -1286238 + AT_rich Low_complexity Low_complexity 1 48 0 3 762 32 0 0 0 chr3L 23257469 23257501 -1286056 + AT_rich Low_complexity Low_complexity 1 32 0 3 762 363 187 147 45 chr3L 23258177 23258334 -1285223 + DNAREP1_DM LINE Penelope 98 270 -324 3 762 250 242 15 0 chr3L 23258372 23258438 -1285119 + DNAREP1_DM LINE Penelope 427 493 -101 3 762 3633 218 71 31 chr3L 23259032 23260106 -1283451 - DM297_I LTR Gypsy -4959 1208 92 3 762 2198 48 7 0 chr3L 23260106 23260631 -1282926 + DMCR1A LINE CR1 3896 4463 -7 3 762 585 219 17 51 chr3L 23260670 23260848 -1282709 - DM297_I LTR Gypsy -5995 172 1 3 762 349 75 313 0 chr3L 23260870 23260937 -1282620 - DM297_LTR LTR Gypsy -45 369 282 3 762 888 260 89 29 chr3L 23261157 23261683 -1281874 - TOM_I LTR Gypsy -330 5837 5204 3 762 262 156 30 30 chr3L 23261678 23261744 -1281813 - DM297_I LTR Gypsy -1412 4755 4690 3 762 255 87 64 21 chr3L 23261754 23261801 -1281756 - DM297_I LTR Gypsy -1656 4511 4463 3 762 1098 145 97 0 chr3L 23261790 23261997 -1281560 - DM297_I LTR Gypsy -1956 4211 3985 3 762 22 0 0 0 chr3L 23262026 23262048 -1281509 + AT_rich Low_complexity Low_complexity 1 22 0 3 762 309 161 0 0 chr3L 23262259 23262321 -1281236 + DNAREP1_DM LINE Penelope 141 202 -392 3 762 895 57 257 0 chr3L 23262324 23262464 -1281093 + DNAREP1_DM LINE Penelope 419 594 0 3 762 325 70 35 0 chr3L 23264059 23264116 -1279441 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 762 254 125 0 77 chr3L 23264125 23264177 -1279380 + DNAREP1_DM LINE Penelope 537 584 -10 3 762 638 167 8 0 chr3L 23264608 23264734 -1278823 - Transib-N1_DM DNA Transib 0 514 388 3 762 25 0 0 0 chr3L 23264734 23264759 -1278798 + AT_rich Low_complexity Low_complexity 1 25 0 3 762 296 132 19 0 chr3L 23264759 23264812 -1278745 - Transib-N1_DM DNA Transib -118 396 343 3 762 2435 0 0 0 chr3L 23264860 23265126 -1278431 + Invader2_LTR LTR Gypsy 1 266 0 3 762 26608 9 15 0 chr3L 23265126 23269650 -1273907 + Invader2_I LTR Gypsy 1 4592 0 3 762 2435 0 0 0 chr3L 23269650 23269916 -1273641 + Invader2_LTR LTR Gypsy 1 266 0 3 762 197 119 24 0 chr3L 23270195 23270237 -1273320 + (TTA)n Simple_repeat Simple_repeat 2 44 0 3 762 35 71 0 0 chr3L 23270239 23270309 -1273248 + AT_rich Low_complexity Low_complexity 1 70 0 3 762 427 149 245 0 chr3L 23270503 23270597 -1272960 - Transib-N1_DM DNA Transib -396 118 2 3 762 23 0 0 0 chr3L 23270757 23270780 -1272777 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 25 31 0 0 chr3L 23270897 23270929 -1272628 + AT_rich Low_complexity Low_complexity 1 32 0 3 762 474 93 187 14 chr3L 23270955 23271088 -1272469 - DNAREP1_DM LINE Penelope -149 445 247 3 762 307 236 26 60 chr3L 23272039 23272156 -1271401 + DNAREP1_DM LINE Penelope 398 510 -84 3 762 974 148 37 12 chr3L 23272196 23272383 -1271174 + DNAREP1_DM LINE Penelope 1 318 -276 3 762 234 146 139 47 chr3L 23272438 23272524 -1271033 + DMCR1A LINE CR1 51 144 -4326 3 762 289 167 13 77 chr3L 23272521 23272599 -1270958 + DMCR1A LINE CR1 344 416 -4054 3 762 502 116 306 0 chr3L 23272567 23272711 -1270846 + DMCR1A LINE CR1 216 403 -4067 3 762 551 191 184 97 chr3L 23272712 23272990 -1270567 + Gypsy8_LTR LTR Gypsy 1 302 -2 3 762 293 225 0 14 chr3L 23272992 23273064 -1270493 + Gypsy8_I LTR Gypsy 1 71 -4276 3 762 800 162 76 10 chr3L 23273475 23273835 -1269722 + DNAREP1_DM LINE Penelope 1 332 -262 3 762 6370 144 76 41 chr3L 23273874 23275154 -1268403 + DMCR1A LINE CR1 2250 3574 -896 3 762 294 53 0 0 chr3L 23275154 23275192 -1268365 + LOOPER1_DM DNA PiggyBac 1 38 -1843 3 762 1222 102 186 61 chr3L 23275209 23275505 -1268052 + LOOPER1_DM DNA PiggyBac 324 656 -1225 3 762 1739 99 56 41 chr3L 23276022 23276360 -1267197 + LOOPER1_DM DNA PiggyBac 1537 1879 -2 3 762 1300 92 4 84 chr3L 23276375 23276600 -1266957 + DMCR1A LINE CR1 3799 4005 -465 3 762 552 99 0 0 chr3L 23276601 23276682 -1266875 + DMCR1A LINE CR1 4159 4239 -231 3 762 26 107 0 0 chr3L 23276728 23276831 -1266726 + AT_rich Low_complexity Low_complexity 1 103 0 3 762 23 33 0 0 chr3L 23277031 23277061 -1266496 + AT_rich Low_complexity Low_complexity 1 30 0 3 762 291 116 0 0 chr3L 23277450 23277493 -1266064 - DNAREP1_DM LINE Penelope -4 590 548 3 762 276 265 0 0 chr3L 23277571 23277639 -1265918 - DNAREP1_DM LINE Penelope -239 355 288 3 762 894 247 30 30 chr3L 23277923 23278227 -1265330 + DNAREP1_DM LINE Penelope 17 320 -274 3 762 326 219 237 0 chr3L 23278256 23278370 -1265187 + DNAREP1_DM LINE Penelope 444 584 -10 3 762 248 178 0 43 chr3L 23279209 23279256 -1264301 + PENELOPE LINE Penelope 3938 3982 -179 3 762 808 178 34 17 chr3L 23279550 23279736 -1263821 - DNAREP1_DM LINE Penelope -275 319 4 3 762 33 80 0 0 chr3L 23280241 23280316 -1263241 + AT_rich Low_complexity Low_complexity 1 75 0 3 762 206 79 26 26 chr3L 23280592 23280631 -1262926 + (TTATA)n Simple_repeat Simple_repeat 3 41 0 3 762 626 316 0 0 chr3L 23280891 23281116 -1262441 - BLASTOPIA_I LTR Gypsy -706 3775 3551 3 762 887 135 0 29 chr3L 23281645 23281782 -1261775 + DNAREP1_DM LINE Penelope 325 457 -137 3 762 241 154 0 0 chr3L 23281816 23281855 -1261702 + DNAREP1_DM LINE Penelope 368 406 -188 3 762 1038 91 169 175 chr3L 23282231 23282563 -1260994 + DNAREP1_DM LINE Penelope 1 330 -264 3 762 552 114 159 0 chr3L 23282551 23282639 -1260918 + DNAREP1_DM LINE Penelope 438 539 -55 3 762 43554 3 0 0 chr3L 23283682 23288391 -1255166 + BS2 LINE Jockey 13 4721 0 3 762 7246 63 7 1 chr3L 23289148 23290057 -1253500 - BS3_DM LINE Jockey -1 1789 876 3 762 4852 61 8 0 chr3L 23290054 23290660 -1252897 - BS3_DM LINE Jockey -480 1310 700 3 762 2905 48 23 0 chr3L 23290677 23291030 -1252527 - BS3_DM LINE Jockey -1321 469 109 3 762 2850 153 102 12 chr3L 23291048 23292022 -1251535 - Gypsy_I LTR Gypsy -2632 3875 2815 3 762 1903 98 64 81 chr3L 23292033 23292378 -1251179 + DMCR1A LINE CR1 280 618 -3852 3 762 2116 49 44 22 chr3L 23292375 23292646 -1250911 + DMCR1A LINE CR1 798 1074 -3396 3 762 5139 36 8 7 chr3L 23292650 23293262 -1250295 + DMCR1A LINE CR1 1027 1639 -2831 3 762 698 115 0 65 chr3L 23293354 23293493 -1250064 - Gypsy8_I LTR Gypsy -4111 236 107 3 762 800 133 88 39 chr3L 23293490 23293815 -1249742 - Gypsy8_I LTR Gypsy -526 3821 3437 3 762 352 165 9 80 chr3L 23293903 23294015 -1249542 - Gypsy8_I LTR Gypsy -913 3434 3331 3 762 4389 99 55 57 chr3L 23294167 23294925 -1248632 - Gypsy8_I LTR Gypsy -1009 3338 2582 3 762 31 0 0 0 chr3L 23294925 23294956 -1248601 + AT_rich Low_complexity Low_complexity 1 31 0 3 762 9486 53 8 0 chr3L 23294956 23296137 -1247420 - DMRT1B LINE R1 -1 5182 3993 3 762 9193 80 33 9 chr3L 23296134 23297324 -1246233 - DMRT1B LINE R1 -3776 1407 143 3 762 180 0 0 0 chr3L 23297324 23297344 -1246213 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 3 762 9193 85 27 9 chr3L 23297344 23297524 -1246033 - DMRT1B LINE R1 -4847 336 2 3 762 8745 174 65 48 chr3L 23297695 23300908 -1242649 - Gypsy8_I LTR Gypsy -3022 3631 218 3 762 4595 39 6 0 chr3L 23300996 23301536 -1242021 - DMRT1A LINE R1 -10 5173 4631 3 762 3248 66 0 0 chr3L 23301548 23301957 -1241600 - DMRT1A LINE R1 -937 4246 3838 3 762 13566 56 68 5 chr3L 23301960 23303811 -1239746 - DMRT1A LINE R1 -1779 3404 1436 3 762 2219 64 0 25 chr3L 23303793 23304112 -1239445 - DMRT1A LINE R1 -3967 1216 906 3 762 3933 91 36 0 chr3L 23304117 23304668 -1238889 - DMRT1A LINE R1 -4612 571 1 3 762 798 303 13 13 chr3L 23304840 23305144 -1238413 - OSVALDO_I LTR Gypsy -5973 680 377 3 762 405 123 0 92 chr3L 23305881 23305979 -1237578 - Gypsy8_I LTR Gypsy -4111 236 148 3 762 1257 116 81 27 chr3L 23305973 23306195 -1237362 - Gypsy8_LTR LTR Gypsy -70 234 1 3 762 756 87 48 0 chr3L 23306198 23306302 -1237255 + DMCR1A LINE CR1 1844 1952 -2518 3 762 8047 67 75 3 chr3L 23306299 23308287 -1235270 + DMCR1A LINE CR1 2340 4470 0 3 762 1065 62 20 20 chr3L 23308290 23308438 -1235119 - G5A_DM LINE Jockey -1366 1475 1328 3 762 263 0 0 0 chr3L 23308435 23308463 -1235094 + DNAREP1_DM LINE Penelope 567 594 0 3 762 255 311 79 49 chr3L 23309496 23309690 -1233867 + HMSBEAGLE_I LTR Gypsy 2720 2919 -3610 3 762 4786 39 81 3 chr3L 23309690 23310346 -1233211 - PROTOP_B DNA P 0 1153 447 3 762 958 90 186 0 chr3L 23310325 23310481 -1233076 - PROTOP_B DNA P -968 185 1 3 762 274 224 47 76 chr3L 23310747 23310884 -1232673 - Gypsy8_LTR LTR Gypsy -60 244 85 3 762 475 312 77 50 chr3L 23311172 23311472 -1232085 + DM1731_I LTR Copia 2701 3008 -968 3 762 1970 171 118 44 chr3L 23313706 23314225 -1229332 + DNAREP1_DM LINE Penelope 1 557 -37 3 762 1139 303 23 23 chr3L 23314225 23314661 -1228896 + Gypsy4_I LTR Gypsy 2317 2752 -3536 3 762 712 299 59 32 chr3L 23314659 23314998 -1228559 + Gypsy4_I LTR Gypsy 3671 4018 -2270 3 762 26 0 0 0 chr3L 23314998 23315024 -1228533 + AT_rich Low_complexity Low_complexity 1 26 0 3 762 875 328 76 36 chr3L 23315032 23316092 -1227465 + Gypsy4_I LTR Gypsy 4371 5473 -815 3 762 236 244 37 49 chr3L 23316204 23316286 -1227271 + Gypsy4_I LTR Gypsy 5779 5859 -429 3 762 528 176 0 0 chr3L 23317067 23317232 -1226325 + (TATATG)n Simple_repeat Simple_repeat 2 166 0 3 762 357 211 0 0 chr3L 23317629 23317714 -1225843 + Jockey2 LINE Jockey 2727 2782 -646 3 762 760 85 39 7 chr3L 23317702 23317808 -1225749 + DNAREP1_DM LINE Penelope 400 491 -103 3 762 764 69 10 0 chr3L 23318168 23318270 -1225287 + DNAREP1_DM LINE Penelope 492 594 0 3 762 24 32 0 0 chr3L 23319109 23319140 -1224417 + AT_rich Low_complexity Low_complexity 1 31 0 3 762 1841 146 85 17 chr3L 23319202 23319640 -1223917 + DNAREP1_DM LINE Penelope 1 594 0 3 762 456 193 16 56 chr3L 23319534 23319660 -1223897 - P_DG DNA P -27 2861 2741 3 762 289 125 17 51 chr3L 23319688 23319747 -1223810 - Transib-N1_DM DNA Transib -452 62 6 3 762 23 0 0 0 chr3L 23320425 23320448 -1223109 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 24 53 0 0 chr3L 23320863 23320901 -1222656 + AT_rich Low_complexity Low_complexity 1 38 0 3 762 1046 221 57 10 chr3L 23322518 23322819 -1220738 + DNAREP1_DM LINE Penelope 1 315 -279 3 762 511 143 0 0 chr3L 23322880 23322957 -1220600 + DNAREP1_DM LINE Penelope 518 594 0 3 762 256 214 129 0 chr3L 23323241 23323311 -1220246 + DNAREP1_DM LINE Penelope 1 79 -515 3 762 495 84 121 0 chr3L 23323308 23323391 -1220166 + DNAREP1_DM LINE Penelope 276 368 -226 3 762 25 90 0 0 chr3L 23324151 23324218 -1219339 + AT_rich Low_complexity Low_complexity 1 67 0 3 762 22 0 0 0 chr3L 23324369 23324391 -1219166 + AT_rich Low_complexity Low_complexity 1 22 0 3 762 1011 101 69 0 chr3L 23324608 23324767 -1218790 + DNAREP1_DM LINE Penelope 1 170 -424 3 762 5889 56 111 21 chr3L 23324763 23326086 -1217471 - DMCR1A LINE CR1 0 4470 3029 3 762 6899 38 6 5 chr3L 23326086 23326917 -1216640 - DMCR1A LINE CR1 -1690 2780 1949 3 762 1802 118 237 3 chr3L 23326939 23327293 -1216264 + DNAREP1_DM LINE Penelope 158 594 0 3 762 425 152 38 12 chr3L 23328053 23328133 -1215424 + MINOS DNA Tc1 13 94 -1681 3 762 352 129 99 14 chr3L 23328149 23328220 -1215337 + MINOS DNA Tc1 808 884 -891 3 762 700 174 360 28 chr3L 23328453 23328736 -1214821 + DNAREP1_DM LINE Penelope 203 579 -15 3 762 996 139 186 5 chr3L 23328738 23328949 -1214608 + DNAREP1_DM LINE Penelope 211 445 -149 3 762 1462 130 43 8 chr3L 23328957 23329212 -1214345 - PROTOP_B DNA P 0 1153 890 3 762 1233 176 50 0 chr3L 23329306 23329610 -1213947 - PROTOP_B DNA P -817 336 78 3 762 273 52 500 25 chr3L 23329617 23329683 -1213874 + DNAREP1_DM LINE Penelope 498 594 0 3 762 880 171 205 46 chr3L 23329822 23330128 -1213429 + DNAREP1_DM LINE Penelope 1 332 -262 3 762 766 38 27 63 chr3L 23330139 23330250 -1213307 + G5A_DM LINE Jockey 2735 2841 0 3 762 286 161 0 16 chr3L 23330275 23330338 -1213219 + DNAREP1_DM LINE Penelope 215 276 -318 3 762 813 128 118 26 chr3L 23330335 23330488 -1213069 + DNAREP1_DM LINE Penelope 427 593 -1 3 762 465 236 0 0 chr3L 23330494 23330604 -1212953 + DNAREP1_DM LINE Penelope 8 117 -477 3 763 22 0 0 0 chr3L 23330852 23330874 -1212683 + AT_rich Low_complexity Low_complexity 1 22 0 3 763 23 0 0 0 chr3L 23331450 23331473 -1212084 + AT_rich Low_complexity Low_complexity 1 23 0 3 763 1656 158 105 19 chr3L 23331546 23332052 -1211505 - DNAREP1_DM LINE Penelope 0 594 2 3 763 1964 131 137 19 chr3L 23332984 23333421 -1210136 - DNAREP1_DM LINE Penelope 0 594 18 3 763 23 86 0 0 chr3L 23333763 23333821 -1209736 + AT_rich Low_complexity Low_complexity 1 58 0 3 763 300 271 104 24 chr3L 23334081 23334206 -1209351 - DNAREP1_DM LINE Penelope -164 430 296 3 763 760 0 87 0 chr3L 23334411 23334526 -1209031 + (TATAA)n Simple_repeat Simple_repeat 5 129 0 3 763 22 35 0 0 chr3L 23334719 23334748 -1208809 + AT_rich Low_complexity Low_complexity 1 29 0 3 763 464 178 0 32 chr3L 23335802 23335881 -1207676 + DNAREP1_DM LINE Penelope 45 120 -474 3 763 1153 171 33 50 chr3L 23335881 23336283 -1207274 + DNAREP1_DM LINE Penelope 1 332 -262 3 763 2555 56 182 8 chr3L 23337198 23337896 -1205661 + PROTOP_B DNA P 1 1073 -80 3 763 2920 119 75 13 chr3L 23338239 23338908 -1204649 + DNAREP1_DM LINE Penelope 1 594 0 3 763 620 353 51 19 chr3L 23339216 23339747 -1203810 - MAX_I LTR Pao -1336 6578 6031 3 763 2619 46 21 0 chr3L 23340423 23340749 -1202808 + DMCR1A LINE CR1 2083 2415 -2055 3 763 347 188 0 0 chr3L 23341206 23341275 -1202282 + Invader3_LTR LTR Gypsy 75 143 -155 3 763 7090 41 58 0 chr3L 23341292 23342312 -1201245 + DMCR1A LINE CR1 2400 3478 -992 3 763 4287 101 36 14 chr3L 23342317 23342948 -1200609 - NINJA_I LTR Pao -213 5798 5154 3 763 2560 84 237 3 chr3L 23342946 23343317 -1200240 - NINJA_I LTR Pao -561 5450 4993 3 763 4772 102 143 0 chr3L 23343315 23344041 -1199516 - NINJA_I LTR Pao -2297 3714 2885 3 763 7130 129 130 5 chr3L 23344037 23345441 -1198116 - NINJA_I LTR Pao -3293 2718 1081 3 763 314 301 88 44 chr3L 23345455 23345636 -1197921 - MAX_I LTR Pao -3266 4648 4460 3 763 415 303 150 13 chr3L 23345718 23345952 -1197605 - MAX_I LTR Pao -3639 4275 4002 3 763 271 264 99 0 chr3L 23346118 23346209 -1197348 - MAX_I LTR Pao -4245 3669 3570 3 763 536 317 62 8 chr3L 23346651 23346893 -1196664 - BATUMI_I LTR Pao -5478 2485 2231 3 763 244 62 35 70 chr3L 23347336 23347422 -1196135 + (TTA)n Simple_repeat Simple_repeat 2 84 0 3 763 3272 8 0 0 chr3L 23347798 23348151 -1195406 + Gypsy2_LTR LTR Gypsy 1 353 0 3 763 33887 1 0 0 chr3L 23348160 23351836 -1191721 - FW_DM LINE Jockey 0 4692 1017 3 763 30168 98 38 34 chr3L 23351881 23358681 -1184876 + Gypsy2_I LTR Gypsy 1 6126 -9 3 763 3233 8 3 0 chr3L 23358682 23359034 -1184523 + Gypsy2_LTR LTR Gypsy 1 353 0 3 763 31560 7 0 0 chr3L 23359197 23362662 -1180895 + FW_DM LINE Jockey 1228 4692 0 3 763 944 63 16 0 chr3L 23362671 23362798 -1180759 + FB4_DM DNA Tc1 1106 1234 -2855 3 763 326 73 0 0 chr3L 23362796 23362837 -1180720 + FB4_DM DNA Tc1 2720 2760 -1329 3 763 12224 97 4 1 chr3L 23362937 23364666 -1178891 - S_DM DNA Tc1 0 1736 3 3 763 2644 89 94 3 chr3L 23364763 23365147 -1178410 - Gypsy6A_LTR LTR Gypsy 0 420 2 3 763 315 302 12 2 chr3L 23365148 23365253 -1178304 - Gypsy6_I LTR Gypsy 0 6177 6100 3 763 27 0 0 0 chr3L 23365276 23365303 -1178254 + AT_rich Low_complexity Low_complexity 1 27 0 3 763 4792 4 0 0 chr3L 23365306 23365824 -1177733 + NOMAD_LTR LTR Gypsy 1 518 0 3 763 61441 1 0 2 chr3L 23365824 23372408 -1171149 + NOMAD_I LTR Gypsy 1 6572 0 3 763 3739 5 0 0 chr3L 23372408 23372813 -1170744 + NOMAD_LTR LTR Gypsy 114 518 0 3 763 1634 322 4 6 chr3L 23372826 23373376 -1170181 - Gypsy6_I LTR Gypsy -172 6840 6292 3 763 1517 241 128 0 chr3L 23373459 23373858 -1169699 - Gypsy2_I LTR Gypsy -2491 4521 4072 3 763 1012 245 5 0 chr3L 23373862 23374070 -1169487 - Gypsy3_I LTR Gypsy -2866 3311 3103 3 763 3301 264 37 5 chr3L 23374067 23375161 -1168396 - Gypsy2_I LTR Gypsy -4148 2864 1715 3 763 273 306 36 29 chr3L 23375213 23375351 -1168206 - ROOA_I LTR Pao -2155 4694 4556 3 763 41 0 0 0 chr3L 23375441 23375482 -1168075 + AT_rich Low_complexity Low_complexity 1 41 0 3 763 297 54 0 0 chr3L 23375753 23375790 -1167767 - PROTOP_B DNA P -226 927 891 3 763 2374 50 0 0 chr3L 23375787 23376086 -1167471 + DOC3_DM LINE Jockey 509 807 -3933 3 763 312 41 204 0 chr3L 23376086 23376135 -1167422 + DOC3_DM LINE Jockey 978 1036 -3704 3 763 5772 39 68 6 chr3L 23376124 23377130 -1166427 + DOC3_DM LINE Jockey 1201 2269 -2471 3 763 1472 49 60 0 chr3L 23377891 23378076 -1165481 - PROTOP_B DNA P -957 196 1 3 763 1410 74 0 26 chr3L 23378076 23378269 -1165288 - Invader5_LTR LTR Gypsy -164 188 1 3 763 4792 4 0 0 chr3L 23378273 23378791 -1164766 - NOMAD_LTR LTR Gypsy 0 518 1 3 763 61437 1 0 2 chr3L 23378791 23385373 -1158184 - NOMAD_I LTR Gypsy 0 6572 1 3 763 4792 6 1 0 chr3L 23385373 23385905 -1157652 - NOMAD_LTR LTR Gypsy 0 518 1 3 763 54 0 0 0 chr3L 23385905 23385959 -1157598 + AT_rich Low_complexity Low_complexity 1 54 0 3 763 29 17 0 79 chr3L 23386101 23386164 -1157393 + AT_rich Low_complexity Low_complexity 1 58 0 3 763 34 65 0 32 chr3L 23386248 23386343 -1157214 + AT_rich Low_complexity Low_complexity 1 92 0 3 763 819 234 119 136 chr3L 23387285 23387889 -1155668 - DNAREP1_DM LINE Penelope 0 594 1 3 763 361 304 23 18 chr3L 23388040 23388211 -1155346 - Gypsy4_I LTR Gypsy -3647 2641 2470 3 763 424 230 162 16 chr3L 23388295 23388543 -1155014 - DNAREP1_DM LINE Penelope -301 293 10 3 763 24 0 0 0 chr3L 23389085 23389109 -1154448 + AT_rich Low_complexity Low_complexity 1 24 0 3 763 1922 241 119 17 chr3L 23389163 23389888 -1153669 - FW_DM LINE Jockey -10 4682 3951 3 763 656 256 245 19 chr3L 23389895 23390209 -1153348 - FW_DM LINE Jockey -1328 3364 2980 3 763 2073 257 60 30 chr3L 23390276 23390941 -1152616 - FW_DM LINE Jockey -3229 1463 779 3 763 2354 46 0 0 chr3L 23391049 23391333 -1152224 + STALKER4_LTR LTR Gypsy 30 313 -89 3 763 4633 162 69 32 chr3L 23391415 23392399 -1151158 - DMRT1B LINE R1 -1137 4046 3027 3 763 1867 145 77 21 chr3L 23392403 23392740 -1150817 - DMRT1B LINE R1 -2602 2581 2226 3 763 1431 115 57 4 chr3L 23392740 23392984 -1150573 - DMRT1B LINE R1 -4005 1178 922 3 763 2042 84 40 0 chr3L 23392984 23393257 -1150300 + R1_DM LINE R1 5035 5318 -38 3 763 247 280 53 21 chr3L 23393411 23393506 -1150051 - FW_DM LINE Jockey -4386 306 209 3 763 359 178 130 9 chr3L 23393742 23393850 -1149707 - DNAREP1_DM LINE Penelope -356 238 118 3 763 564 43 0 0 chr3L 23393847 23393917 -1149640 + DNAREP1_DM LINE Penelope 487 556 -38 3 763 28 0 0 0 chr3L 23393999 23394027 -1149530 + AT_rich Low_complexity Low_complexity 1 28 0 3 763 2248 168 98 6 chr3L 23395724 23396191 -1147366 - DMCR1A LINE CR1 -1667 2803 2294 3 763 469 125 125 0 chr3L 23396226 23396306 -1147251 - STALKER4_LTR LTR Gypsy -41 361 272 3 763 10719 44 17 11 chr3L 23396316 23397635 -1145922 - DMCR1A LINE CR1 0 4470 3143 3 763 2051 60 0 29 chr3L 23397639 23397914 -1145643 - STALKER4_LTR LTR Gypsy -124 278 12 3 763 603 106 0 0 chr3L 23397953 23398028 -1145529 + QUASIMODO_LTR LTR Gypsy 570 644 -14 3 763 7789 51 20 19 chr3L 23398028 23399031 -1144526 + QUASIMODO_I LTR Gypsy 2 1005 -5055 3 763 729 99 0 59 chr3L 23399039 23399157 -1144400 + QUASIMODO_I LTR Gypsy 1182 1292 -4768 3 763 8010 72 28 9 chr3L 23399158 23400561 -1142996 + QUASIMODO_I LTR Gypsy 2380 3906 -2057 3 763 2237 16 0 4 chr3L 23400566 23400818 -1142739 + DIVER2_LTR LTR Pao 135 385 0 3 763 3636 52 0 0 chr3L 23400818 23401257 -1142300 + DIVER2_I LTR Pao 1 439 -3708 3 763 5067 31 56 0 chr3L 23401469 23402078 -1141479 + DIVER2_I LTR Pao 434 1076 -3071 3 763 8048 37 28 11 chr3L 23402081 23403082 -1140475 + DIVER2_I LTR Pao 1577 2594 -1553 3 763 4152 25 25 0 chr3L 23403079 23403558 -1139999 + DIVER2_I LTR Pao 3139 3629 -518 3 763 5437 36 39 25 chr3L 23403558 23404782 -1138775 + PROTOP DNA P 1 1105 0 3 763 4631 21 0 0 chr3L 23404782 23405307 -1138250 + DIVER2_I LTR Pao 3623 4147 0 3 763 3470 16 0 3 chr3L 23405307 23405693 -1137864 + DIVER2_LTR LTR Pao 1 385 0 3 763 3541 57 2 2 chr3L 23405693 23406132 -1137425 + DIVER2_I LTR Pao 1 439 -3708 3 763 2805 31 96 3 chr3L 23406344 23406698 -1136859 + DIVER2_I LTR Pao 434 820 -3327 3 763 19177 31 36 16 chr3L 23406678 23409042 -1134515 + DIVER2_I LTR Pao 1220 3629 -518 3 763 4467 23 14 0 chr3L 23409042 23409560 -1133997 + PROTOP_A DNA P 1 525 -580 3 763 2778 31 0 0 chr3L 23409558 23409911 -1133646 + QUASIMODO_I LTR Gypsy 5262 5614 -446 3 763 1303 107 0 100 chr3L 23409911 23410160 -1133397 + DIVER_LTR LTR Pao 1 224 0 3 763 2792 53 97 0 chr3L 23410180 23410591 -1132966 + QUASIMODO_I LTR Gypsy 5609 6059 -1 3 763 2465 123 35 53 chr3L 23410620 23411127 -1132430 + QUASIMODO_LTR LTR Gypsy 29 657 -1 3 763 926 84 20 66 chr3L 23411427 23411579 -1131978 + Invader1_LTR LTR Gypsy 1 145 -278 3 763 1039 147 23 6 chr3L 23411582 23411753 -1131804 + Invader1_LTR LTR Gypsy 250 423 0 3 763 312 273 31 47 chr3L 23411753 23411880 -1131677 + MICROPIA_I LTR Gypsy 1 125 -4351 3 763 1293 321 40 35 chr3L 23411972 23412808 -1130749 + MICROPIA_I LTR Gypsy 955 1794 -2682 3 763 646 295 41 41 chr3L 23412875 23413168 -1130389 + Invader6_I LTR Gypsy 2062 2354 -1745 3 763 923 329 14 20 chr3L 23413163 23413660 -1129897 + MICROPIA_I LTR Gypsy 3487 3980 -496 3 763 28 0 0 0 chr3L 23413953 23413981 -1129576 + AT_rich Low_complexity Low_complexity 1 28 0 3 763 2684 102 69 5 chr3L 23414164 23414599 -1128958 + Invader1_I LTR Gypsy 2724 3186 0 3 763 2217 132 69 15 chr3L 23414631 23415022 -1128535 + Invader1_LTR LTR Gypsy 12 423 0 3 763 32389 36 9 3 chr3L 23415042 23418949 -1124608 - STALKER4_I LTR Gypsy -298 6232 2305 3 763 1089 90 0 0 chr3L 23419082 23419227 -1124330 + DMRT1C LINE R1 3314 3458 -1985 3 763 273 287 50 50 chr3L 23419977 23420098 -1123459 + DIVER2_I LTR Pao 3638 3758 -389 3 763 643 169 176 0 chr3L 23421591 23421739 -1121818 - I_DM LINE I -1581 4650 4477 3 763 710 95 133 0 chr3L 23421747 23421852 -1121705 - DNAREP1_DM LINE Penelope -39 555 437 3 763 477 50 0 0 chr3L 23421850 23421910 -1121647 - DNAREP1_DM LINE Penelope -534 60 1 3 763 308 222 12 36 chr3L 23421910 23421994 -1121563 - I_DM LINE I -3344 2887 2806 3 763 1770 136 7 4 chr3L 23422281 23422562 -1120995 - Invader4_LTR LTR Gypsy 0 346 65 3 763 227 37 0 0 chr3L 23422584 23422611 -1120946 + QUASIMODO_LTR LTR Gypsy 1 27 -631 3 763 201 74 0 0 chr3L 23422617 23422644 -1120913 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 763 5597 122 66 47 chr3L 23422655 23423840 -1119717 + DMRT1C LINE R1 952 2158 -3285 3 763 4714 92 97 0 chr3L 23423836 23424534 -1119023 + DMRT1C LINE R1 2792 3557 -1886 3 763 1327 71 6 0 chr3L 23424535 23424705 -1118852 + DMRT1C LINE R1 4005 4175 -1268 3 763 1129 81 0 0 chr3L 23424708 23424857 -1118700 + DMRT1C LINE R1 4711 4859 -584 3 763 2136 67 63 3 chr3L 23424856 23425155 -1118402 + DMRT1C LINE R1 5064 5380 -63 3 763 691 111 0 0 chr3L 23425161 23425260 -1118297 - DMRT1C LINE R1 -2042 3401 3303 3 763 642 14 0 0 chr3L 23425260 23425332 -1118225 + DOC5_DM LINE Jockey 2502 2573 -2109 3 763 10307 47 136 6 chr3L 23425370 23426898 -1116659 + DOC5_DM LINE Jockey 2813 4541 -141 3 763 29 0 0 0 chr3L 23426914 23426943 -1116614 + AT_rich Low_complexity Low_complexity 1 29 0 3 763 4667 63 122 9 chr3L 23427848 23428629 -1114928 + BS3_DM LINE Jockey 922 1790 0 3 763 1557 141 174 39 chr3L 23428738 23429225 -1114332 - DNAREP1_DM LINE Penelope 0 594 2 3 763 21 71 0 0 chr3L 23429298 23429340 -1114217 + AT_rich Low_complexity Low_complexity 1 42 0 3 763 249 250 79 10 chr3L 23429614 23429686 -1113871 - ZAM_LTR LTR Gypsy 0 472 394 3 763 1244 184 52 31 chr3L 23429686 23429972 -1113585 - ZAM_LTR LTR Gypsy 0 472 181 3 763 348 224 26 26 chr3L 23430280 23430358 -1113199 + POGO DNA Pogo 789 866 -1255 3 763 1058 146 33 102 chr3L 23430789 23431033 -1112524 + DMLTR5 LTR Gypsy 40 266 0 3 763 2086 103 61 20 chr3L 23431032 23431377 -1112180 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 3 763 31 44 0 0 chr3L 23431392 23431437 -1112120 + AT_rich Low_complexity Low_complexity 1 45 0 3 763 30714 142 3 8 chr3L 23431599 23436264 -1107293 + HMSBEAGLE_I LTR Gypsy 1212 5850 -679 3 763 1852 204 42 104 chr3L 23436589 23437185 -1106372 + HMSBEAGLE_I LTR Gypsy 5810 6368 -161 3 763 356 143 27 67 chr3L 23437419 23437494 -1106063 + HMSBEAGLE_I LTR Gypsy 6334 6405 -124 3 763 864 135 0 0 chr3L 23437592 23437718 -1105839 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 3 763 1060 183 36 18 chr3L 23437806 23438029 -1105528 + DMLTR5 LTR Gypsy 40 266 0 3 763 319 260 0 9 chr3L 23438165 23438270 -1105287 - Gypsy5_I LTR Gypsy -874 5635 5532 3 763 342 297 13 26 chr3L 23438541 23438693 -1104864 - Gypsy5_I LTR Gypsy -5458 1051 902 3 763 280 341 40 43 chr3L 23438912 23439212 -1104345 + POGO DNA Pogo 990 1288 -833 3 763 31 82 0 0 chr3L 23439909 23439982 -1103575 + AT_rich Low_complexity Low_complexity 1 73 0 3 763 520 268 0 0 chr3L 23439982 23440120 -1103437 - IDEFIX_I LTR Gypsy -5172 456 319 3 763 253 218 270 9 chr3L 23440119 23440230 -1103327 - IDEFIX_I LTR Gypsy -5470 158 19 3 763 21 36 0 0 chr3L 23440498 23440526 -1103031 + AT_rich Low_complexity Low_complexity 1 28 0 3 763 429 217 242 0 chr3L 23440677 23440838 -1102719 - IDEFIX_LTR LTR Gypsy -3 591 392 3 763 295 221 232 33 chr3L 23440861 23441137 -1102420 - IDEFIX_LTR LTR Gypsy -263 331 1 3 763 21 0 0 0 chr3L 23441983 23442004 -1101553 + AT_rich Low_complexity Low_complexity 1 21 0 3 763 1064 146 290 62 chr3L 23442059 23442366 -1101191 - DNAREP1_DM LINE Penelope -1 593 217 3 763 189 0 0 0 chr3L 23444407 23444428 -1099129 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 3 763 260 312 80 0 chr3L 23444562 23444674 -1098883 + G_DM LINE Jockey 2995 3115 -1231 3 763 3243 37 5 0 chr3L 23446629 23447012 -1096545 - ROOA_LTR LTR Pao -1 385 1 3 763 443 301 75 12 chr3L 23447057 23447309 -1096248 + OSVALDO_I LTR Gypsy 1849 2116 -4537 3 763 302 340 71 21 chr3L 23447455 23447695 -1095862 + OSVALDO_I LTR Gypsy 2328 2579 -4074 3 763 428 331 0 11 chr3L 23447918 23448101 -1095456 + OSVALDO_I LTR Gypsy 2928 3108 -3545 3 763 399 346 16 16 chr3L 23448551 23448795 -1094762 - Ulysses_I LTR Gypsy -3960 2421 2178 3 763 1361 155 96 18 chr3L 23450070 23450421 -1093136 + PROTOP_A DNA P 735 1103 -2 3 763 1259 163 71 0 chr3L 23451264 23451503 -1092054 + DMCR1A LINE CR1 876 1131 -3339 3 763 989 216 141 73 chr3L 23451583 23452030 -1091527 + DMCR1A LINE CR1 1361 1838 -2632 3 763 370 218 0 0 chr3L 23452022 23452100 -1091457 + DMCR1A LINE CR1 2395 2472 -1998 3 763 2237 141 128 58 chr3L 23452120 23452859 -1090698 - Gypsy8_I LTR Gypsy -3311 1036 230 3 763 410 217 0 70 chr3L 23453548 23453677 -1089880 - Gypsy8_I LTR Gypsy -4118 229 110 3 763 36372 24 14 0 chr3L 23453682 23457907 -1085650 - DMRT1A LINE R1 -423 4760 478 3 763 6354 22 1 6 chr3L 23457916 23458647 -1084910 - DMRT1A LINE R1 0 5183 4456 3 763 195 42 0 0 chr3L 23458647 23458671 -1084886 + (TTGTG)n Simple_repeat Simple_repeat 4 27 0 3 763 2387 99 0 30 chr3L 23458692 23459056 -1084501 + Mariner2_DM DNA Tc1 560 912 0 3 763 1368 221 274 3 chr3L 23459056 23459805 -1083752 - LINEJ1_DM LINE Jockey -3936 1084 133 3 763 3663 135 123 12 chr3L 23459837 23460511 -1083046 + DMCR1A LINE CR1 3329 4077 -393 3 763 402 376 16 20 chr3L 23460622 23461075 -1082482 + FW_DM LINE Jockey 2494 2944 -1748 3 763 604 99 0 42 chr3L 23461482 23461577 -1081980 + G3_DM LINE Jockey 3 93 -4512 3 764 689 326 38 100 chr3L 23462666 23462705 -1080852 + DIVER2_I LTR Pao 1051 1140 -3007 3 764 2828 126 33 42 chr3L 23462705 23463186 -1080371 + G3_DM LINE Jockey 103 579 -4026 3 764 689 326 38 100 chr3L 23463186 23463464 -1080093 + DIVER2_I LTR Pao 1141 1798 -2349 3 764 580 49 37 0 chr3L 23463839 23463921 -1079636 + TRANSIB1 DNA Transib 2930 3014 0 3 764 1666 51 0 0 chr3L 23463937 23464134 -1079423 - PROTOP DNA P 0 4480 4284 3 764 3909 125 48 35 chr3L 23464130 23464820 -1078737 + STALKER4_I LTR Gypsy 2295 2993 -3537 3 764 29 28 0 0 chr3L 23464941 23464977 -1078580 + AT_rich Low_complexity Low_complexity 1 36 0 3 764 4754 196 37 69 chr3L 23464989 23466103 -1077454 + Gypsy3_I LTR Gypsy 173 1250 -4927 3 764 4619 204 70 41 chr3L 23466119 23468722 -1074835 + Gypsy3_I LTR Gypsy 1715 5047 -1965 3 764 3853 200 28 65 chr3L 23468717 23469577 -1073980 + Gypsy3_I LTR Gypsy 4989 5816 -361 3 764 5138 109 70 15 chr3L 23469574 23470443 -1073114 + STALKER4_I LTR Gypsy 5443 6359 -171 3 764 2955 132 78 0 chr3L 23470487 23470986 -1072571 + DMRT1B LINE R1 230 767 -4416 3 764 1549 146 50 0 chr3L 23470983 23471244 -1072313 + DMRT1B LINE R1 1461 1734 -3449 3 764 3301 129 97 0 chr3L 23471245 23471781 -1071776 + DMRT1B LINE R1 1872 2459 -2724 3 764 10394 127 117 22 chr3L 23471780 23473753 -1069804 + DMRT1B LINE R1 3019 5179 -4 3 764 330 160 30 98 chr3L 23473747 23473879 -1069678 + STALKER4_I LTR Gypsy 6408 6530 0 3 764 1051 333 75 10 chr3L 23473947 23474550 -1069007 + DIVER2_I LTR Pao 3401 4042 -105 3 764 632 294 47 18 chr3L 23475138 23475415 -1068142 + DOC3_DM LINE Jockey 3088 3372 -1368 3 764 16057 58 33 1 chr3L 23475401 23477421 -1066136 - DMCR1A LINE CR1 0 4470 2386 3 764 465 69 0 0 chr3L 23477421 23477479 -1066078 - DMCR1A LINE CR1 -2221 2249 2192 3 764 3604 34 10 0 chr3L 23477478 23477894 -1065663 - DMCR1A LINE CR1 -2777 1693 1274 3 764 451 137 0 0 chr3L 23477918 23477991 -1065566 - PROTOP DNA P -3399 1081 1009 3 764 4069 91 109 0 chr3L 23478003 23478627 -1064930 - PROTOP DNA P -3788 692 1 3 764 515 193 0 18 chr3L 23478627 23478738 -1064819 + G_DM LINE Jockey 4151 4259 -87 3 764 604 248 71 55 chr3L 23479358 23479594 -1063963 - Invader3_I LTR Gypsy -231 4657 4449 3 764 883 75 202 22 chr3L 23479685 23479913 -1063644 + Gypsy12A_LTR LTR Gypsy 2012 2280 0 3 764 518 274 84 25 chr3L 23479913 23480092 -1063465 - Invader3_I LTR Gypsy -1291 3597 3407 3 764 806 173 129 8 chr3L 23480085 23480471 -1063086 - DNAREP1_DM LINE Penelope -262 332 101 3 764 1812 92 52 5 chr3L 23480509 23480827 -1062730 + DNAREP1_DM LINE Penelope 201 565 -29 3 764 743 316 4 12 chr3L 23480952 23481208 -1062349 - BEL_I LTR Pao -449 4955 4702 3 764 282 269 51 51 chr3L 23481216 23481314 -1062243 - BEL_I LTR Pao -1350 4054 3957 3 764 8451 33 33 29 chr3L 23481365 23482466 -1061091 + PROTOP_A DNA P 1 1105 0 3 764 648 123 17 42 chr3L 23482769 23482888 -1060669 + DNAREP1_DM LINE Penelope 479 594 0 3 764 342 203 0 0 chr3L 23482885 23482949 -1060608 + DM412 LTR Gypsy 6736 6799 -98 3 764 1878 129 170 12 chr3L 23482990 23483503 -1060054 + DNAREP1_DM LINE Penelope 1 594 0 3 764 21 0 0 0 chr3L 23484283 23484304 -1059253 + AT_rich Low_complexity Low_complexity 1 21 0 3 764 278 107 83 67 chr3L 23484601 23484661 -1058896 + DNAREP1_DM LINE Penelope 129 189 -405 3 764 386 62 0 0 chr3L 23485009 23485057 -1058500 + DNAREP1_DM LINE Penelope 541 588 -6 3 764 220 37 93 0 chr3L 23485057 23485111 -1058446 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 764 523 162 48 14 chr3L 23485254 23485400 -1058157 - DNAREP1_DM LINE Penelope -278 316 129 3 764 868 169 127 37 chr3L 23485370 23485885 -1057672 - DNAREP1_DM LINE Penelope -264 330 1 3 764 753 192 108 29 chr3L 23485895 23486099 -1057458 - DNAREP1_DM LINE Penelope 0 594 375 3 764 2370 79 70 3 chr3L 23486122 23486466 -1057091 + Gypsy12A_LTR LTR Gypsy 30 396 -1884 3 764 1655 87 11 49 chr3L 23486472 23486737 -1056820 + Gypsy12A_LTR LTR Gypsy 1035 1289 -991 3 764 2856 66 29 5 chr3L 23486812 23487193 -1056364 + Gypsy12A_LTR LTR Gypsy 1890 2279 -1 3 764 410 55 0 0 chr3L 23487193 23487246 -1056311 + Gypsy12A_LTR LTR Gypsy 2228 2280 0 3 764 1578 128 94 3 chr3L 23487246 23487537 -1056020 - DNAREP1_DM LINE Penelope -229 365 48 3 764 266 155 56 56 chr3L 23487816 23487834 -1055723 + P_DG DNA P 2740 2757 -131 3 764 477 140 319 0 chr3L 23487834 23487945 -1055612 - DNAREP1_DM LINE Penelope 0 594 448 3 764 9126 28 20 4 chr3L 23487945 23489031 -1054526 - PROTOP_A DNA P 0 1105 2 3 764 997 116 188 94 chr3L 23489102 23489358 -1054199 - DNAREP1_DM LINE Penelope -313 281 2 3 764 24 32 0 0 chr3L 23489450 23489481 -1054076 + AT_rich Low_complexity Low_complexity 1 31 0 3 764 3378 48 4 14 chr3L 23489833 23490271 -1053286 + STALKER4_LTR LTR Gypsy 1 399 -3 3 764 28 48 0 0 chr3L 23490359 23490401 -1053156 + AT_rich Low_complexity Low_complexity 1 42 0 3 764 12164 65 63 18 chr3L 23490408 23492281 -1051276 + STALKER4_I LTR Gypsy 291 2296 -4234 3 764 33669 17 10 2 chr3L 23492287 23496191 -1047366 + STALKER4_I LTR Gypsy 2596 6530 0 3 764 2889 69 59 15 chr3L 23496191 23496606 -1046951 + STALKER4_LTR LTR Gypsy 1 399 -3 3 764 27 62 0 0 chr3L 23497094 23497142 -1046415 + AT_rich Low_complexity Low_complexity 1 48 0 3 764 2921 112 21 43 chr3L 23497168 23497652 -1045905 - HMSBEAGLE_I LTR Gypsy -425 6104 5632 3 764 2598 73 63 63 chr3L 23497702 23498112 -1045445 - HMSBEAGLE_I LTR Gypsy -1079 5450 5041 3 764 15315 46 44 3 chr3L 23498110 23500000 -1043557 + Baggins1 LINE LOA 2236 4204 -1249 3 764 1039 70 0 7 chr3L 23500000 23500145 -1043412 + Baggins1 LINE LOA 4205 4348 -1105 3 764 3307 42 107 0 chr3L 23500133 23500974 -1042583 + Baggins1 LINE LOA 4524 5453 0 3 764 5919 100 224 4 chr3L 23500983 23502931 -1040626 - HMSBEAGLE_I LTR Gypsy -1475 5054 2678 3 764 4939 117 148 21 chr3L 23502950 23504075 -1039482 - HMSBEAGLE_I LTR Gypsy -4244 2285 974 3 764 230 143 0 113 chr3L 23504120 23504191 -1039366 - HMSBEAGLE_I LTR Gypsy -5759 770 708 3 764 211 208 0 0 chr3L 23504191 23504239 -1039318 + (TTG)n Simple_repeat Simple_repeat 2 49 0 3 764 1069 135 107 116 chr3L 23504439 23504757 -1038800 - HMSBEAGLE_I LTR Gypsy -6040 489 175 3 764 1355 12 71 0 chr3L 23504728 23504897 -1038660 - G4_DM LINE Jockey -2409 1447 1267 3 764 1180 16 473 0 chr3L 23504898 23505086 -1038471 - G4_DM LINE Jockey -3101 755 479 3 764 1727 53 12 0 chr3L 23505079 23505325 -1038232 - G4_DM LINE Jockey -3524 332 84 3 764 673 296 41 51 chr3L 23505789 23506265 -1037292 - DM297_I LTR Gypsy -2912 3508 2787 3 764 1139 77 34 10 chr3L 23506265 23506474 -1037083 - TLD2 Unknown Unknown 0 218 5 3 764 673 296 41 51 chr3L 23506474 23506757 -1036800 - DM297_I LTR Gypsy -2912 2786 2354 3 764 44 0 0 0 chr3L 23507756 23507800 -1035757 + AT_rich Low_complexity Low_complexity 1 44 0 3 764 228 35 0 0 chr3L 23508433 23508462 -1035095 - Gypsy10_LTR LTR Gypsy -335 29 1 3 764 18046 83 31 37 chr3L 23508480 23511468 -1032089 - BATUMI_I LTR Pao -679 7284 4315 3 764 27632 64 29 50 chr3L 23511618 23516030 -1027527 - BATUMI_I LTR Pao -3642 4321 1 3 764 2030 35 3 31 chr3L 23516030 23516321 -1027236 - BATUMI_I LTR Pao -679 7284 7002 3 764 442 56 0 112 chr3L 23516320 23516400 -1027157 - Gypsy10_I LTR Gypsy -12 5266 5196 3 764 4066 83 56 44 chr3L 23516522 23517201 -1026356 - Gypsy10_I LTR Gypsy -99 5179 4493 3 764 22 56 0 0 chr3L 23517343 23517379 -1026178 + AT_rich Low_complexity Low_complexity 1 36 0 3 764 4505 219 51 8 chr3L 23517395 23518877 -1024680 - Gypsy10_I LTR Gypsy -1543 4745 3200 3 764 4580 94 13 14 chr3L 23518877 23519599 -1023958 - Gypsy10_I LTR Gypsy -3502 1776 880 3 764 8794 26 2 6 chr3L 23519623 23520733 -1022824 - PROTOP_A DNA P 0 1105 1 3 764 6367 83 65 29 chr3L 23520738 23521828 -1021729 - Gypsy10_I LTR Gypsy -4206 1072 3 3 764 1372 48 184 0 chr3L 23521830 23522136 -1021421 - Gypsy10_LTR LTR Gypsy 0 364 2 3 764 414 333 47 10 chr3L 23522141 23522438 -1021119 + Copia_I LTR Copia 146 453 -4140 3 764 261 267 9 9 chr3L 23522851 23522957 -1020600 + Copia_I LTR Copia 1448 1553 -3040 3 764 10294 45 77 6 chr3L 23523001 23524706 -1018851 + DMCR1A LINE CR1 1363 3189 -1281 3 764 271 167 0 0 chr3L 23524740 23524794 -1018763 - DMLTR5 LTR Gypsy -212 54 1 3 764 258 283 150 0 chr3L 23525925 23526045 -1017512 + MAX_I LTR Pao 1379 1516 -6398 3 764 691 188 210 0 chr3L 23526122 23526308 -1017249 + MAX_I LTR Pao 1690 1914 -6000 3 764 3091 200 47 30 chr3L 23526305 23527027 -1016530 + MAX_I LTR Pao 2079 2812 -5102 3 764 422 112 197 6 chr3L 23527033 23527171 -1016386 + MAX_I LTR Pao 3390 3592 -4322 3 764 237 143 24 0 chr3L 23527243 23527285 -1016272 + MAX_I LTR Pao 3596 3638 -4276 3 764 770 186 52 0 chr3L 23527303 23527475 -1016082 + MAX_I LTR Pao 4140 4320 -3594 3 764 3521 133 36 2 chr3L 23527489 23528092 -1015465 + MAX_I LTR Pao 4723 5346 -2568 3 764 825 172 45 86 chr3L 23528094 23528316 -1015241 - ACCORD2_LTR LTR Gypsy -2 213 1 3 764 1061 199 189 0 chr3L 23528316 23528602 -1014955 + MAX_I LTR Pao 5343 5682 -2232 3 764 518 315 11 0 chr3L 23528842 23529023 -1014534 - OSVALDO_I LTR Gypsy -5962 691 509 3 764 1094 145 136 0 chr3L 23530735 23530956 -1012601 + DMCR1A LINE CR1 475 725 -3745 3 764 269 239 0 0 chr3L 23530962 23531029 -1012528 + DMCR1A LINE CR1 1051 1117 -3353 3 764 717 186 12 0 chr3L 23531425 23531586 -1011971 + DMCR1A LINE CR1 1250 1412 -3058 3 764 2365 153 53 10 chr3L 23531587 23532075 -1011482 + DMCR1A LINE CR1 2262 2770 -1700 3 764 941 299 41 41 chr3L 23532803 23533239 -1010318 - DIVER2_I LTR Pao -2 4145 3710 3 764 269 227 0 15 chr3L 23533888 23533955 -1009602 - DIVER2_I LTR Pao -2313 1834 1769 3 764 23 54 0 0 chr3L 23534236 23534273 -1009284 + AT_rich Low_complexity Low_complexity 1 37 0 3 764 27 29 0 0 chr3L 23534722 23534756 -1008801 + AT_rich Low_complexity Low_complexity 1 34 0 3 764 935 149 106 9 chr3L 23534977 23535194 -1008363 - DNAREP1_DM LINE Penelope -142 452 215 3 764 226 319 0 11 chr3L 23536199 23536291 -1007266 - TV1I LTR Gypsy -4999 964 874 3 764 1915 122 109 39 chr3L 23536603 23537100 -1006457 - DNAREP1_DM LINE Penelope 0 594 86 3 764 329 174 0 0 chr3L 23537208 23537277 -1006280 - ROO_I LTR Pao -2371 5885 5817 3 764 682 246 232 7 chr3L 23537305 23537719 -1005838 - TABOR_I LTR Gypsy -509 5827 5321 3 764 550 191 304 40 chr3L 23538245 23538596 -1004961 - Stalker2_I LTR Gypsy -2003 5399 5145 3 764 2437 256 112 8 chr3L 23538626 23539533 -1004024 - TABOR_I LTR Gypsy -2179 4157 3156 3 764 699 190 97 154 chr3L 23539555 23539977 -1003580 + Gypsy3_LTR LTR Gypsy 1 398 0 3 764 269 224 56 79 chr3L 23540802 23540928 -1002629 - Stalker2_I LTR Gypsy -5524 1878 1756 3 764 286 270 18 9 chr3L 23540919 23541031 -1002526 - MDG1_I LTR Gypsy -5161 1435 1323 3 764 958 103 267 42 chr3L 23541341 23541771 -1001786 - DNAREP1_DM LINE Penelope 0 594 1 3 764 459 299 88 3 chr3L 23541752 23542058 -1001499 - Copia_I LTR Copia -461 4132 3801 3 764 833 278 62 19 chr3L 23542153 23542720 -1000837 - Copia_I LTR Copia -2405 2188 1563 3 764 2725 11 132 16 chr3L 23543366 23543745 -999812 - Invader1_LTR LTR Gypsy 0 423 1 3 764 5430 9 47 0 chr3L 23543745 23544404 -999153 - Invader1_I LTR Gypsy 0 3186 2497 3 764 10968 128 25 15 chr3L 23544403 23546470 -997087 - Invader1_I LTR Gypsy -2018 2081 1 3 764 3562 17 2 0 chr3L 23546470 23546892 -996665 - Invader1_LTR LTR Gypsy 0 423 1 3 764 523 216 45 96 chr3L 23547045 23547337 -996220 - FB4_DM DNA Tc1 -1405 2684 2408 3 764 22 0 0 0 chr3L 23547368 23547390 -996167 + AT_rich Low_complexity Low_complexity 1 22 0 3 764 30 27 0 0 chr3L 23547471 23547508 -996049 + AT_rich Low_complexity Low_complexity 1 37 0 3 764 246 370 0 0 chr3L 23548300 23548419 -995138 + DIVER2_I LTR Pao 460 578 -3569 3 764 572 203 7 7 chr3L 23548431 23548570 -994987 - FB4_DM DNA Tc1 -1546 2543 2405 3 764 21 0 0 0 chr3L 23548597 23548618 -994939 + AT_rich Low_complexity Low_complexity 1 21 0 3 764 23 54 0 0 chr3L 23548702 23548739 -994818 + AT_rich Low_complexity Low_complexity 1 37 0 3 764 3505 182 152 13 chr3L 23549390 23550380 -993177 + LINEJ1_DM LINE Jockey 1205 2332 -2688 3 764 10938 45 56 7 chr3L 23550572 23552116 -991441 + TC1-2_DM DNA Tc1 26 1644 0 3 764 643 294 69 11 chr3L 23552405 23552667 -990890 - TIRANT_I LTR Gypsy -3012 4680 4404 3 764 1092 256 78 15 chr3L 23552720 23553120 -990437 - Gypsy5_I LTR Gypsy -3425 3084 2660 3 764 1898 49 4 50 chr3L 23553274 23553554 -990003 - MDG3_LTR LTR Gypsy 0 267 1 3 764 231 307 0 0 chr3L 23554158 23554233 -989324 - ACCORD_I LTR Gypsy -4233 2055 1981 3 764 290 51 0 0 chr3L 23554916 23554955 -988602 + Gypsy9_LTR LTR Gypsy 162 200 -136 3 764 886 111 7 0 chr3L 23554959 23555103 -988454 - BS3_DM LINE Jockey -5 1785 1641 3 764 7118 85 48 0 chr3L 23555128 23556220 -987337 - BS3_DM LINE Jockey -213 1577 584 3 764 822 112 14 0 chr3L 23556219 23556362 -987195 + Gypsy9_LTR LTR Gypsy 192 336 0 3 764 1703 160 111 3 chr3L 23557186 23557561 -985996 + LINEJ1_DM LINE Jockey 2331 2745 -2275 3 764 512 168 10 10 chr3L 23557569 23557671 -985886 + LINEJ1_DM LINE Jockey 3301 3402 -1618 3 764 1460 112 17 23 chr3L 23557661 23557997 -985560 - DNAREP1_DM LINE Penelope -184 410 39 3 764 745 155 110 0 chr3L 23559333 23559486 -984071 + DMCR1A LINE CR1 2866 3035 -1435 3 764 398 162 402 0 chr3L 23559486 23559613 -983944 - DNAREP1_DM LINE Penelope 0 594 417 3 764 245 185 0 0 chr3L 23560863 23560917 -982640 + DNAREP1_DM LINE Penelope 538 591 -3 3 764 35 24 0 0 chr3L 23560965 23561007 -982550 + AT_rich Low_complexity Low_complexity 1 42 0 3 764 649 130 355 24 chr3L 23561021 23561187 -982370 - DNAREP1_DM LINE Penelope -33 561 341 3 764 32 26 0 0 chr3L 23561221 23561260 -982297 + AT_rich Low_complexity Low_complexity 1 39 0 3 764 468 161 0 0 chr3L 23561374 23561461 -982096 - DNAREP1_DM LINE Penelope -507 87 1 3 764 28 0 0 0 chr3L 23563059 23563087 -980470 + AT_rich Low_complexity Low_complexity 1 28 0 3 764 3441 41 24 11 chr3L 23563662 23564130 -979427 - Mariner2_DM DNA Tc1 0 912 439 3 764 1299 44 473 10 chr3L 23564304 23564509 -979048 - Mariner2_DM DNA Tc1 -612 300 1 3 764 1020 65 9 19 chr3L 23564762 23565378 -978179 - RSP Satellite Satellite -45 610 1 3 764 879 83 11 24 chr3L 23565422 23566073 -977484 - RSP Satellite Satellite -4 642 1 3 764 36887 35 19 8 chr3L 23566126 23571153 -972404 - STALKER4_I LTR Gypsy -1108 5422 291 3 764 28 48 0 0 chr3L 23571160 23571202 -972355 + AT_rich Low_complexity Low_complexity 1 42 0 3 764 1718 24 0 5 chr3L 23571276 23571489 -972068 - STALKER4_LTR LTR Gypsy -190 212 1 3 764 21 36 0 0 chr3L 23571779 23571807 -971750 + AT_rich Low_complexity Low_complexity 1 28 0 3 764 229 143 0 0 chr3L 23571807 23571849 -971708 - BARI1 DNA Tc1 -1706 44 3 3 764 4456 46 3 0 chr3L 23571817 23572408 -971149 + IDEFIX_LTR LTR Gypsy 1 593 -1 3 764 275 68 68 0 chr3L 23572408 23572467 -971090 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 764 22 35 0 0 chr3L 23572475 23572504 -971053 + AT_rich Low_complexity Low_complexity 1 29 0 3 764 257 226 75 9 chr3L 23572845 23572952 -970605 - MDG3_I LTR Gypsy -2227 2759 2646 3 764 1622 105 232 2 chr3L 23572944 23573331 -970226 - DNAREP1_DM LINE Penelope -118 476 1 3 764 6244 105 3 10 chr3L 23573999 23574994 -968563 - S_DM DNA Tc1 -20 1716 729 3 764 8691 17 19 4 chr3L 23574994 23576082 -967475 - PROTOP_A DNA P 0 1105 1 3 764 688 47 0 0 chr3L 23576082 23576168 -967389 - S_DM DNA Tc1 -1001 735 650 3 764 23 33 0 0 chr3L 23576205 23576235 -967322 + AT_rich Low_complexity Low_complexity 1 30 0 3 764 629 212 200 17 chr3L 23576745 23576980 -966577 - FW_DM LINE Jockey -1026 3666 3389 3 764 409 203 70 53 chr3L 23577155 23577342 -966215 + DNAREP1_DM LINE Penelope 104 293 -301 3 764 488 90 0 0 chr3L 23577319 23577395 -966162 + DNAREP1_DM LINE Penelope 181 256 -338 3 764 558 96 294 5 chr3L 23577395 23577592 -965965 + DNAREP1_DM LINE Penelope 1 254 -340 3 764 3312 55 82 2 chr3L 23577607 23578095 -965462 - G4_DM LINE Jockey -1 3855 3329 3 764 435 70 0 0 chr3L 23578089 23578146 -965411 - G4_DM LINE Jockey -683 3173 3117 3 764 3850 44 106 11 chr3L 23578128 23578702 -964855 - G4_DM LINE Jockey -903 2953 2325 3 764 609 47 12 0 chr3L 23578700 23578786 -964771 - G4_DM LINE Jockey -1876 1980 1894 3 764 7563 18 60 15 chr3L 23578795 23579926 -963631 - G4_DM LINE Jockey -2195 1661 480 3 764 879 154 36 45 chr3L 23579924 23580235 -963322 + DNAREP1_DM LINE Penelope 84 315 -279 3 764 537 92 194 30 chr3L 23580232 23580366 -963191 + DNAREP1_DM LINE Penelope 231 386 -208 3 764 876 204 295 4 chr3L 23580374 23580849 -962708 + DM412 LTR Gypsy 4035 4647 -2250 3 764 39 50 0 0 chr3L 23580879 23580939 -962618 + AT_rich Low_complexity Low_complexity 1 60 0 3 764 668 148 0 0 chr3L 23581369 23581484 -962073 + DM412 LTR Gypsy 4809 4923 -1974 3 764 461 257 40 7 chr3L 23581478 23581627 -961930 - FW_DM LINE Jockey -1261 3431 3278 3 764 259 200 62 0 chr3L 23581685 23581765 -961792 + Stalker2_I LTR Gypsy 4959 5043 -2359 3 764 22 56 0 0 chr3L 23581782 23581818 -961739 + AT_rich Low_complexity Low_complexity 1 36 0 3 764 449 92 0 0 chr3L 23581862 23581927 -961630 + DOC4_DM LINE Jockey 2727 2791 0 3 764 326 170 67 34 chr3L 23581987 23582120 -961437 + DOC LINE Jockey 4625 4773 -20 3 764 541 105 0 0 chr3L 23582111 23582197 -961360 - DNAREP1_DM LINE Penelope -162 432 347 3 764 378 19 0 0 chr3L 23582403 23582456 -961101 - G4_DM LINE Jockey 0 3856 3804 3 764 1560 137 83 37 chr3L 23582568 23582916 -960641 + PROTOP DNA P 1 364 -4116 3 764 21 36 0 0 chr3L 23583459 23583487 -960070 + AT_rich Low_complexity Low_complexity 1 28 0 3 764 1012 302 13 8 chr3L 23583657 23584044 -959513 - OSVALDO_I LTR Gypsy -4114 2539 2151 3 764 1018 81 393 20 chr3L 23584639 23584939 -958618 + PROTOP_B DNA P 1 412 -741 3 764 21 0 0 0 chr3L 23584986 23585007 -958550 + AT_rich Low_complexity Low_complexity 1 21 0 3 764 39 80 0 0 chr3L 23585041 23585129 -958428 + AT_rich Low_complexity Low_complexity 1 88 0 3 764 433 143 8 0 chr3L 23585139 23585227 -958330 + PROTOP DNA P 4221 4308 -172 3 764 234 0 0 0 chr3L 23587060 23587086 -956471 + (CTAGT)n Simple_repeat Simple_repeat 5 30 0 3 764 583 265 99 45 chr3L 23587220 23587441 -956116 - Gypsy10_LTR LTR Gypsy -107 257 25 3 764 250 98 32 32 chr3L 23587621 23587684 -955873 - DNAREP1_DM LINE Penelope -308 286 224 3 764 1396 221 10 28 chr3L 23587812 23588208 -955349 - Gypsy_LTR LTR Gypsy -92 390 2 3 764 281 351 43 39 chr3L 23588334 23588565 -954992 + G2_DM LINE Jockey 1835 2066 -1036 3 764 4799 207 73 16 chr3L 23588547 23589703 -953854 - Gypsy_I LTR Gypsy -3938 2569 1349 3 764 22 94 0 0 chr3L 23589881 23589945 -953612 + AT_rich Low_complexity Low_complexity 1 64 0 3 764 2234 118 0 3 chr3L 23589945 23590292 -953265 - Invader4_LTR LTR Gypsy 0 346 1 3 764 1193 94 26 119 chr3L 23590292 23590595 -952962 - Invader4_I LTR Gypsy 0 2413 2139 3 764 3732 132 50 81 chr3L 23590632 23591516 -952041 - Invader4_I LTR Gypsy -536 1877 1022 3 764 5720 64 83 3 chr3L 23591660 23592611 -950946 - Invader4_I LTR Gypsy -1386 1027 1 3 764 1195 134 0 5 chr3L 23592611 23592814 -950743 - Invader4_LTR LTR Gypsy 0 346 145 3 765 3378 19 34 0 chr3L 23592995 23593409 -950148 + ROO_LTR LTR Pao 1 428 0 3 765 23 33 0 0 chr3L 23593439 23593469 -950088 + AT_rich Low_complexity Low_complexity 1 30 0 3 765 414 185 261 14 chr3L 23593634 23593870 -949687 - Gypsy_I LTR Gypsy -5466 1041 728 3 765 6980 160 107 23 chr3L 23593853 23595375 -948182 - G_DM LINE Jockey -65 4281 2632 3 765 444 197 102 8 chr3L 23595419 23595537 -948020 - G_DM LINE Jockey -1800 2546 2418 3 765 32 26 0 0 chr3L 23595968 23596007 -947550 + AT_rich Low_complexity Low_complexity 1 39 0 3 765 434 278 56 65 chr3L 23601148 23601471 -942086 - TOM_I LTR Gypsy -1 6111 5792 3 765 2414 229 72 30 chr3L 23601655 23602367 -941190 + G5_DM LINE Jockey 830 1571 -3285 3 765 332 155 0 0 chr3L 23602365 23602423 -941134 + G5A_DM LINE Jockey 111 168 -2673 3 765 1851 112 0 27 chr3L 23602423 23602716 -940841 + G5A_DM LINE Jockey 360 644 -2197 3 765 2667 74 3 0 chr3L 23602746 23603110 -940447 + G5A_DM LINE Jockey 877 1241 -1600 3 765 973 100 279 0 chr3L 23603110 23603394 -940163 + G5A_DM LINE Jockey 1460 1822 -1019 3 765 662 122 0 0 chr3L 23603395 23603502 -940055 + G5A_DM LINE Jockey 1950 2056 -785 3 765 990 99 7 0 chr3L 23603517 23603668 -939889 + G5A_DM LINE Jockey 2312 2463 -378 3 765 1014 122 20 50 chr3L 23603648 23603846 -939711 + G5A_DM LINE Jockey 2640 2831 -10 3 765 2639 30 267 0 chr3L 23604583 23605084 -938473 + Baggins1 LINE LOA 3930 4564 -889 3 765 942 72 224 0 chr3L 23605077 23605336 -938221 + Baggins1 LINE LOA 4731 5047 -406 3 765 253 19 35 53 chr3L 23605361 23605418 -938139 + (TATAA)n Simple_repeat Simple_repeat 5 60 0 3 765 695 41 53 26 chr3L 23605436 23605587 -937970 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 3 765 546 148 40 24 chr3L 23605899 23606024 -937533 + DMTOM1_LTR LTR Gypsy 284 410 0 3 765 382 102 14 28 chr3L 23606024 23606086 -937471 + DMTOM1_LTR LTR Gypsy 349 409 -1 3 765 252 18 105 0 chr3L 23606086 23606143 -937414 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 765 338 212 25 0 chr3L 23606622 23606702 -936855 - R1_DM LINE R1 -4859 497 416 3 765 798 203 232 33 chr3L 23606724 23607060 -936497 - R1_DM LINE R1 -4859 497 95 3 765 975 134 17 12 chr3L 23607058 23607231 -936326 - DNAREP1_DM LINE Penelope -95 499 326 3 765 340 156 154 11 chr3L 23607231 23607322 -936235 - DNAREP1_DM LINE Penelope -466 128 25 3 765 841 152 216 9 chr3L 23608189 23608402 -935155 - DMCR1A LINE CR1 -1797 2673 2417 3 765 276 128 0 157 chr3L 23608533 23608616 -934941 - DMCR1A LINE CR1 -2418 2052 1983 3 765 5053 165 68 2 chr3L 23608781 23609777 -933780 - MAX_I LTR Pao -782 7132 6071 3 765 427 132 118 0 chr3L 23609911 23609985 -933572 - MAX_I LTR Pao -1833 6081 5999 3 765 365 23 0 0 chr3L 23609985 23610029 -933528 - DNAREP1_DM LINE Penelope 0 594 551 3 765 661 145 138 15 chr3L 23610068 23610333 -933224 - DNAREP1_DM LINE Penelope -262 332 89 3 765 1558 217 42 57 chr3L 23610412 23610864 -932693 - DMCR1A LINE CR1 -2653 1817 1373 3 765 591 96 11 0 chr3L 23610864 23610958 -932599 - DNAREP1_DM LINE Penelope 0 594 500 3 765 23 0 0 0 chr3L 23610958 23610981 -932576 + AT_rich Low_complexity Low_complexity 1 23 0 3 765 527 150 80 0 chr3L 23611245 23611345 -932212 + DNAREP1_DM LINE Penelope 1 108 -486 3 765 242 154 0 0 chr3L 23611465 23611517 -932040 + DNAREP1_DM LINE Penelope 198 249 -345 3 765 910 132 36 14 chr3L 23611795 23612071 -931486 - DNAREP1_DM LINE Penelope -274 320 101 3 765 9181 46 33 3 chr3L 23612459 23613681 -929876 - TC1_DM DNA Tc1 0 1666 409 3 765 40099 6 0 2 chr3L 23613773 23618475 -925082 + DOC LINE Jockey 32 4724 -1 3 765 778 220 282 48 chr3L 23618491 23618945 -924612 + DNAREP1_DM LINE Penelope 2 561 -33 3 765 35 24 0 0 chr3L 23618959 23619001 -924556 + AT_rich Low_complexity Low_complexity 1 42 0 3 765 245 185 0 0 chr3L 23619049 23619103 -924454 - DNAREP1_DM LINE Penelope -3 591 538 3 765 373 170 402 0 chr3L 23620330 23620457 -923100 + DNAREP1_DM LINE Penelope 417 594 0 3 765 745 155 110 0 chr3L 23620455 23620610 -922947 - DMCR1A LINE CR1 -1433 3037 2866 3 765 1413 118 17 23 chr3L 23621944 23622280 -921277 + DNAREP1_DM LINE Penelope 39 410 -184 3 765 512 168 10 10 chr3L 23622270 23622372 -921185 - LINEJ1_DM LINE Jockey -1618 3402 3301 3 765 1703 160 111 3 chr3L 23622380 23622755 -920802 - LINEJ1_DM LINE Jockey -2275 2745 2331 3 765 822 112 14 0 chr3L 23623579 23623722 -919835 - Gypsy9_LTR LTR Gypsy 0 336 192 3 765 7768 94 73 0 chr3L 23623721 23624981 -918576 + BS3_DM LINE Jockey 584 1784 -6 3 765 290 51 0 0 chr3L 23624985 23625024 -918533 - Gypsy9_LTR LTR Gypsy -136 200 162 3 765 254 306 0 0 chr3L 23625702 23625787 -917770 + ACCORD_I LTR Gypsy 1981 2065 -4223 3 765 1894 102 52 38 chr3L 23626704 23627051 -916506 + DNAREP1_DM LINE Penelope 243 594 0 3 765 30 45 0 0 chr3L 23627284 23627328 -916229 + AT_rich Low_complexity Low_complexity 1 44 0 3 765 1027 122 6 6 chr3L 23628178 23628351 -915206 + DNAREP1_DM LINE Penelope 2 174 -420 3 765 737 169 64 44 chr3L 23628343 23628547 -915010 + DNAREP1_DM LINE Penelope 90 297 -297 3 765 236 61 0 0 chr3L 23630724 23630757 -912800 - ROOA_I LTR Pao -3882 2967 2935 3 765 6120 41 15 0 chr3L 23630760 23631543 -912014 + DOC3_DM LINE Jockey 2591 3385 -1355 3 765 4574 35 112 0 chr3L 23631544 23632475 -911082 + DOC3_DM LINE Jockey 3706 4740 0 3 765 2704 38 0 3 chr3L 23632476 23632820 -910737 - ROOA_I LTR Pao -3908 2941 2599 3 765 2492 20 3 0 chr3L 23632813 23633116 -910441 + DIVER2_I LTR Pao 3844 4147 0 3 765 3212 26 0 0 chr3L 23633116 23633501 -910056 + DIVER2_LTR LTR Pao 1 385 0 3 765 1757 14 0 0 chr3L 23633501 23633709 -909848 - DMCR1A LINE CR1 -1265 3205 2998 3 765 10052 40 43 3 chr3L 23633696 23635032 -908525 - DMCR1A LINE CR1 -1628 2842 1454 3 765 2644 38 12 3 chr3L 23635020 23635360 -908197 - DMCR1A LINE CR1 -3187 1283 941 3 765 6019 46 7 18 chr3L 23635359 23636176 -907381 - ROOA_I LTR Pao -4532 2317 1510 3 765 9450 35 33 21 chr3L 23636187 23637485 -906072 - ROOA_I LTR Pao -5535 1314 1 3 765 321 138 0 33 chr3L 23637485 23637545 -906012 - ROOA_LTR LTR Pao 0 386 329 3 765 21 82 0 0 chr3L 23638164 23638213 -905344 + AT_rich Low_complexity Low_complexity 1 49 0 3 765 540 194 47 88 chr3L 23638288 23638480 -905077 + Gypsy8_LTR LTR Gypsy 121 304 0 3 765 289 218 13 0 chr3L 23638480 23638558 -904999 + Gypsy8_I LTR Gypsy 1 79 -4268 3 765 369 247 24 54 chr3L 23638659 23638826 -904731 + Gypsy8_I LTR Gypsy 68 229 -4118 3 765 34 0 0 0 chr3L 23639958 23639992 -903565 + AT_rich Low_complexity Low_complexity 1 34 0 3 765 9068 16 4 0 chr3L 23640083 23641184 -902373 - PROTOP_A DNA P 0 1105 1 3 765 29 47 0 0 chr3L 23641268 23641311 -902246 + AT_rich Low_complexity Low_complexity 1 43 0 3 765 883 118 83 6 chr3L 23641358 23641533 -902024 + DNAREP1_DM LINE Penelope 431 593 -1 3 765 913 159 150 12 chr3L 23641541 23641795 -901762 - DNAREP1_DM LINE Penelope -305 289 1 3 765 255 191 73 0 chr3L 23642748 23642816 -900741 - DNAREP1_DM LINE Penelope -84 510 438 3 765 406 94 16 0 chr3L 23642827 23642891 -900666 - Mariner2_DM DNA Tc1 -409 503 439 3 765 739 59 170 0 chr3L 23643101 23643289 -900268 - Mariner2_DM DNA Tc1 -683 229 10 3 765 8682 22 17 4 chr3L 23643486 23644576 -898981 + PROTOP_A DNA P 1 1105 0 3 765 402 278 121 38 chr3L 23645559 23645900 -897657 - ACCORD2_I LTR Gypsy -2288 4924 4636 3 765 1181 121 175 6 chr3L 23646754 23647129 -896428 - DNAREP1_DM LINE Penelope -20 574 1 3 765 26 30 0 0 chr3L 23647353 23647386 -896171 + AT_rich Low_complexity Low_complexity 1 33 0 3 765 296 269 8 8 chr3L 23647765 23647896 -895661 + TC1-2_DM DNA Tc1 737 867 -777 3 765 695 300 35 20 chr3L 23648004 23648348 -895209 + TC1-2_DM DNA Tc1 1032 1380 -264 3 765 21 0 0 0 chr3L 23648496 23648517 -895040 + AT_rich Low_complexity Low_complexity 1 21 0 3 765 3457 24 9 0 chr3L 23648592 23649016 -894541 + ROO_LTR LTR Pao 1 428 0 3 765 28 48 0 0 chr3L 23649094 23649136 -894421 + AT_rich Low_complexity Low_complexity 1 42 0 3 765 4936 28 24 0 chr3L 23649525 23650162 -893395 + G4_DM LINE Jockey 3205 3856 0 3 765 3101 176 180 73 chr3L 23650443 23651447 -892110 + Gypsy2_I LTR Gypsy 2 1113 -5022 3 765 1858 113 88 30 chr3L 23651436 23651764 -891793 + Gypsy2_I LTR Gypsy 1368 1714 -4421 3 765 328 292 0 0 chr3L 23651942 23652048 -891509 + Gypsy6_I LTR Gypsy 2373 2478 -4534 3 765 4725 143 46 47 chr3L 23652042 23652953 -890604 + Gypsy2_I LTR Gypsy 2166 3075 -3060 3 765 2071 305 106 1 chr3L 23652949 23653865 -889692 + Gypsy6_I LTR Gypsy 4126 5137 -1875 3 765 6090 104 15 61 chr3L 23653892 23654952 -888605 + Gypsy2_I LTR Gypsy 5115 6125 -10 3 765 3059 40 112 0 chr3L 23654995 23655442 -888115 + DOC5_DM LINE Jockey 3897 4393 -289 3 765 406 161 248 39 chr3L 23655681 23655810 -887747 - DNAREP1_DM LINE Penelope -397 197 42 3 765 513 187 256 10 chr3L 23655892 23656107 -887450 - NINJA_LTR LTR Pao -1 316 49 3 765 1307 33 119 0 chr3L 23656244 23656572 -886985 - DOC5_DM LINE Jockey 0 4682 4316 3 765 1009 16 0 0 chr3L 23656579 23656701 -886856 - DOC5_DM LINE Jockey -1321 3361 3240 3 765 271 95 0 0 chr3L 23656701 23656743 -886814 - DOC5_DM LINE Jockey -1691 2991 2950 3 765 1536 48 5 0 chr3L 23656738 23656944 -886613 - DOC5_DM LINE Jockey -2306 2376 2170 3 765 2236 35 10 0 chr3L 23656943 23657232 -886325 - DOC5_DM LINE Jockey -2689 1993 1702 3 765 4005 72 93 14 chr3L 23657230 23657918 -885639 - DOC5_DM LINE Jockey -3938 744 3 3 765 188 67 33 0 chr3L 23658288 23658318 -885239 + (TATAA)n Simple_repeat Simple_repeat 5 35 0 3 765 330 204 155 35 chr3L 23658382 23658524 -885033 - DNAREP1_DM LINE Penelope -435 159 1 3 765 314 209 0 0 chr3L 23658656 23658723 -884834 - Gypsy8_I LTR Gypsy -3311 1036 970 3 765 442 226 153 131 chr3L 23658887 23659162 -884395 - Gypsy8_I LTR Gypsy -3688 659 379 3 765 386 168 0 98 chr3L 23659618 23659730 -883827 - Gypsy8_I LTR Gypsy -2851 1496 1396 3 765 567 125 31 0 chr3L 23659750 23659841 -883716 - Gypsy8_I LTR Gypsy -3192 1155 1062 3 765 2990 70 1 21 chr3L 23659841 23660283 -883274 - STALKER4_LTR LTR Gypsy -3 399 1 3 765 1935 18 52 17 chr3L 23660283 23660500 -883057 - STALKER4_I LTR Gypsy 0 6530 6299 3 765 302 0 26 0 chr3L 23660500 23660538 -883019 + (TAA)n Simple_repeat Simple_repeat 2 40 0 3 765 1935 18 52 17 chr3L 23660538 23660608 -882949 - STALKER4_I LTR Gypsy -232 6298 6233 3 765 1596 35 65 17 chr3L 23660608 23660838 -882719 - BATUMI_LTR LTR Pao 0 272 32 3 765 4661 68 0 5 chr3L 23660860 23661524 -882033 - BATUMI_I LTR Pao 0 7963 7303 3 765 2310 53 9 9 chr3L 23661547 23661872 -881685 + BATUMI_I LTR Pao 6427 6751 -1212 3 765 24455 38 10 69 chr3L 23661865 23665557 -878000 - BATUMI_I LTR Pao -4489 3474 1 3 765 1710 42 8 29 chr3L 23665557 23665803 -877754 - BATUMI_LTR LTR Pao 0 272 32 3 765 8477 11 76 1 chr3L 23665821 23667053 -876504 - STALKER4_I LTR Gypsy -289 6241 4917 3 765 4166 20 18 0 chr3L 23667050 23667540 -876017 - STALKER4_I LTR Gypsy -1844 4686 4188 3 765 22254 43 32 10 chr3L 23667538 23670634 -872923 - STALKER4_I LTR Gypsy -3027 3503 291 3 765 28 48 0 0 chr3L 23670641 23670683 -872874 + AT_rich Low_complexity Low_complexity 1 42 0 3 765 3303 53 1 14 chr3L 23670771 23671210 -872347 - STALKER4_LTR LTR Gypsy -3 399 1 3 765 237 247 13 13 chr3L 23671216 23671294 -872263 - Gypsy8_I LTR Gypsy -3830 2823 2746 3 765 1223 232 50 31 chr3L 23671332 23671705 -871852 - Gypsy8_I LTR Gypsy -3311 1036 690 3 765 1430 158 26 4 chr3L 23671739 23672005 -871552 - Gypsy8_I LTR Gypsy -3846 501 230 3 765 715 282 75 0 chr3L 23672136 23672377 -871180 - OSVALDO_I LTR Gypsy -5982 671 413 3 765 38 0 0 0 chr3L 23672892 23672930 -870627 + AT_rich Low_complexity Low_complexity 1 38 0 3 765 244 130 22 0 chr3L 23672949 23672995 -870562 - Gypsy11_I LTR Gypsy -713 2811 2765 3 765 451 182 11 0 chr3L 23673037 23673125 -870432 - Stalker2_I LTR Gypsy -948 5949 5861 3 765 2948 51 32 0 chr3L 23673142 23673514 -870043 - BS3_DM LINE Jockey -793 997 614 3 765 682 119 119 0 chr3L 23673513 23673631 -869926 - BS3_DM LINE Jockey -839 951 820 3 765 2634 228 89 18 chr3L 23673629 23674537 -869020 - Stalker2_I LTR Gypsy -1041 5856 4796 3 765 352 250 131 7 chr3L 23674632 23674769 -868788 + FW_DM LINE Jockey 3278 3431 -1261 3 765 706 148 0 0 chr3L 23674763 23674878 -868679 - DM412 LTR Gypsy -1974 4923 4809 3 765 39 50 0 0 chr3L 23675308 23675368 -868189 + AT_rich Low_complexity Low_complexity 1 60 0 4 765 1392 202 295 4 chr3L 23675398 23675876 -867681 - DM412 LTR Gypsy -2250 4647 4031 3 765 568 100 194 30 chr3L 23675881 23676015 -867542 - DNAREP1_DM LINE Penelope -208 386 231 4 765 939 154 36 45 chr3L 23676012 23676323 -867234 - DNAREP1_DM LINE Penelope -279 315 84 4 765 7911 19 60 15 chr3L 23676321 23677452 -866105 + G4_DM LINE Jockey 480 1661 -2195 4 765 638 47 12 0 chr3L 23677461 23677547 -866010 + G4_DM LINE Jockey 1894 1980 -1876 4 765 4761 39 32 10 chr3L 23677545 23678160 -865397 + G4_DM LINE Jockey 2325 2953 -903 4 765 389 74 56 0 chr3L 23678142 23678196 -865361 + G4_DM LINE Jockey 3117 3173 -683 4 765 3446 55 84 2 chr3L 23678190 23678677 -864880 + G4_DM LINE Jockey 3329 3855 -1 4 765 544 99 312 6 chr3L 23678699 23678890 -864667 - DNAREP1_DM LINE Penelope -346 248 1 4 765 527 77 0 0 chr3L 23678888 23678966 -864591 - DNAREP1_DM LINE Penelope -336 258 181 4 765 428 190 86 70 chr3L 23678943 23679130 -864427 - DNAREP1_DM LINE Penelope -301 293 104 4 765 449 233 285 19 chr3L 23679304 23679518 -864039 + FW_DM LINE Jockey 3389 3659 -1033 3 765 4065 47 109 16 chr3L 23679790 23680407 -863150 + TRANSIB3 DNA Transib 633 1306 -1577 4 765 3741 39 12 16 chr3L 23680415 23680910 -862647 + TRANSIB3 DNA Transib 2391 2883 0 4 765 21 0 0 0 chr3L 23680973 23680994 -862563 + AT_rich Low_complexity Low_complexity 1 21 0 4 765 461 0 58 0 chr3L 23681674 23681743 -861814 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 765 397 136 136 64 chr3L 23682312 23682422 -861135 + DNAREP1_DM LINE Penelope 182 299 -295 4 765 25 0 0 0 chr3L 23682556 23682581 -860976 + AT_rich Low_complexity Low_complexity 1 25 0 4 765 22 0 0 0 chr3L 23682727 23682749 -860808 + AT_rich Low_complexity Low_complexity 1 22 0 4 765 25 0 0 0 chr3L 23682928 23682953 -860604 + AT_rich Low_complexity Low_complexity 1 25 0 4 765 339 260 3 3 chr3L 23683413 23683513 -860044 - Gypsy4_I LTR Gypsy -3106 3182 3098 4 765 264 221 152 35 chr3L 23684387 23684532 -859025 - Gypsy8_I LTR Gypsy -4185 162 1 4 765 298 219 65 100 chr3L 23684533 23684717 -858840 - Gypsy8_LTR LTR Gypsy -1 303 1 4 765 4506 45 101 14 chr3L 23684802 23685464 -858093 + TRANSIB3 DNA Transib 587 1306 -1577 4 765 3708 41 12 16 chr3L 23685472 23685966 -857591 + TRANSIB3 DNA Transib 2391 2882 -1 4 765 1041 143 139 3 chr3L 23687544 23687824 -855733 + DNAREP1_DM LINE Penelope 1 452 -142 4 765 299 89 18 0 chr3L 23687943 23687999 -855558 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 765 4025 65 49 3 chr3L 23687999 23688567 -854990 + IDEFIX_LTR LTR Gypsy 1 594 0 4 765 4018 13 0 61 chr3L 23688578 23689085 -854472 - MICROPIA_LTR LTR Gypsy 0 476 1 4 765 1218 78 33 0 chr3L 23689085 23689259 -854298 + QUASIMODO_LTR LTR Gypsy 32 211 -447 4 765 223 205 0 57 chr3L 23689611 23689699 -853858 + A-rich Low_complexity Low_complexity 5 87 0 4 765 9252 24 7 0 chr3L 23689739 23690836 -852721 - PROTOP_A DNA P 0 1105 1 4 765 286 312 47 47 chr3L 23690843 23691075 -852482 + QUASIMODO_I LTR Gypsy 485 716 -5344 4 765 195 42 0 0 chr3L 23691170 23691194 -852363 + (ATATG)n Simple_repeat Simple_repeat 2 25 0 4 765 341 158 0 0 chr3L 23691234 23691291 -852266 + QUASIMODO_I LTR Gypsy 6004 6060 0 4 765 638 75 54 45 chr3L 23691291 23691402 -852155 + QUASIMODO_LTR LTR Gypsy 1 112 -546 4 765 583 348 39 37 chr3L 23691403 23692021 -851536 + Jockey2 LINE Jockey 2448 3066 -362 4 765 2667 34 14 22 chr3L 23692014 23692371 -851186 - PROTOP DNA P -1108 3372 3019 4 765 808 53 62 0 chr3L 23692364 23692477 -851080 - PROTOP DNA P -1372 3108 2989 4 765 471 48 0 0 chr3L 23692472 23692534 -851023 - PROTOP DNA P -4179 301 240 4 765 4915 53 93 1 chr3L 23692552 23693230 -850327 - G4_DM LINE Jockey 0 3856 3117 4 765 2289 41 105 12 chr3L 23693212 23693788 -849769 - G4_DM LINE Jockey -903 2953 2325 4 765 638 47 12 0 chr3L 23693786 23693872 -849685 - G4_DM LINE Jockey -1876 1980 1894 4 765 7508 23 105 1 chr3L 23693881 23695253 -848304 - G4_DM LINE Jockey -2195 1661 1 4 765 301 0 204 0 chr3L 23695256 23695300 -848257 - PROTOP_A DNA P -1052 53 1 4 765 1343 136 31 31 chr3L 23695706 23695964 -847593 + DNAREP1_DM LINE Penelope 1 258 -336 4 765 1248 77 313 0 chr3L 23695989 23696196 -847361 + DNAREP1_DM LINE Penelope 322 593 -1 4 765 355 319 152 13 chr3L 23696451 23696838 -846719 + DIVER2_I LTR Pao 791 1231 -2916 4 765 277 313 20 0 chr3L 23696941 23697040 -846517 + DIVER2_I LTR Pao 1469 1569 -2578 4 765 288 229 0 0 chr3L 23697195 23697243 -846314 + DIVER2_I LTR Pao 4094 4141 -6 4 765 247 98 24 0 chr3L 23697378 23697419 -846138 + DMCR1A LINE CR1 4134 4175 -295 4 765 32 0 0 0 chr3L 23697470 23697502 -846055 + AT_rich Low_complexity Low_complexity 1 32 0 4 765 1122 112 53 43 chr3L 23697502 23697689 -845868 - DNAREP1_DM LINE Penelope -21 573 385 4 765 487 151 0 11 chr3L 23697705 23697792 -845765 + DMCR1A LINE CR1 4381 4466 -4 4 765 23 33 0 0 chr3L 23697880 23697910 -845647 + AT_rich Low_complexity Low_complexity 1 30 0 4 765 2518 250 115 80 chr3L 23698045 23699527 -844030 + Gypsy2_I LTR Gypsy 182 1714 -4421 4 765 361 292 0 0 chr3L 23699705 23699811 -843746 + Gypsy6_I LTR Gypsy 2373 2478 -4534 4 765 5023 144 46 47 chr3L 23699805 23700716 -842841 + Gypsy2_I LTR Gypsy 2166 3075 -3060 4 765 1265 112 6 0 chr3L 23700702 23700880 -842677 + Gypsy2_I LTR Gypsy 3394 3572 -2563 4 765 6296 114 76 48 chr3L 23700896 23701989 -841568 + Gypsy2_I LTR Gypsy 3623 4745 -1390 4 765 5778 135 20 21 chr3L 23701978 23703036 -840521 + Gypsy2_I LTR Gypsy 5115 7010 -2 4 765 3210 40 112 0 chr3L 23703081 23703528 -840029 + DOC5_DM LINE Jockey 3897 4393 -289 4 765 818 220 26 0 chr3L 23703648 23703839 -839718 + Gypsy2_I LTR Gypsy 758 953 -5182 4 765 1410 95 16 0 chr3L 23703832 23704022 -839535 + Gypsy2_I LTR Gypsy 1062 1254 -4881 4 765 2155 211 82 21 chr3L 23704020 23704724 -838833 + Gypsy2_I LTR Gypsy 1369 2152 -4860 4 765 4702 106 33 22 chr3L 23704877 23705599 -837958 + Gypsy2_I LTR Gypsy 2467 3196 -2939 4 765 6778 121 84 42 chr3L 23705603 23706768 -836789 + Gypsy2_I LTR Gypsy 3673 4886 -1249 4 765 1540 135 0 171 chr3L 23706778 23707135 -836422 + Gypsy2_I LTR Gypsy 5813 6108 -27 4 765 580 186 25 12 chr3L 23707284 23707449 -836108 + DM176_LTR LTR Gypsy 1 223 -284 4 765 23 33 0 0 chr3L 23708161 23708191 -835366 + AT_rich Low_complexity Low_complexity 1 30 0 4 765 22 35 0 0 chr3L 23708271 23708300 -835257 + AT_rich Low_complexity Low_complexity 1 29 0 4 765 23 86 0 0 chr3L 23709779 23709837 -833720 + AT_rich Low_complexity Low_complexity 1 58 0 4 765 484 177 64 64 chr3L 23709923 23710080 -833477 - DMCR1A LINE CR1 -56 4414 4258 4 765 379 208 125 0 chr3L 23710389 23710485 -833072 - DMCR1A LINE CR1 -311 4159 4052 4 765 2787 149 192 1 chr3L 23710942 23711842 -831715 - DMCR1A LINE CR1 -511 3959 2888 4 765 3054 144 2 11 chr3L 23711841 23712366 -831191 - DMCR1A LINE CR1 -1689 2781 2262 4 765 768 186 12 0 chr3L 23712367 23712528 -831029 - DMCR1A LINE CR1 -3058 1412 1250 4 765 2101 201 80 8 chr3L 23712963 23713449 -830108 - DMCR1A LINE CR1 -3353 1117 597 4 765 970 173 47 34 chr3L 23713449 23713683 -829874 - DNAREP1_DM LINE Penelope -272 322 86 4 765 1208 189 4 11 chr3L 23713704 23713977 -829580 - DNAREP1_DM LINE Penelope -323 271 1 4 765 416 305 28 28 chr3L 23715098 23715277 -828280 - Jockey2 LINE Jockey -406 3022 2844 4 765 26 64 0 0 chr3L 23715632 23715679 -827878 + AT_rich Low_complexity Low_complexity 1 47 0 4 765 236 139 0 0 chr3L 23716148 23716191 -827366 + G6_DM LINE Jockey 1 43 -1999 4 765 233 250 54 0 chr3L 23717429 23717485 -826072 + LINEJ1_DM LINE Jockey 2441 2499 -2521 4 765 1176 308 27 22 chr3L 23718073 23718726 -824831 + G2_DM LINE Jockey 1716 2238 -864 4 765 44 63 0 0 chr3L 23718990 23719069 -824488 + AT_rich Low_complexity Low_complexity 1 79 0 4 765 24 0 0 0 chr3L 23719555 23719579 -823978 + AT_rich Low_complexity Low_complexity 1 24 0 4 765 23 33 0 0 chr3L 23721052 23721082 -822475 + AT_rich Low_complexity Low_complexity 1 30 0 4 765 26 88 0 0 chr3L 23722012 23722080 -821477 + AT_rich Low_complexity Low_complexity 1 68 0 4 765 1042 160 127 50 chr3L 23722254 23722483 -821074 + DNAREP1_DM LINE Penelope 67 442 -152 4 765 210 71 0 0 chr3L 23722483 23722511 -821046 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 4 765 1042 146 131 42 chr3L 23722511 23722572 -820985 + DNAREP1_DM LINE Penelope 443 519 -75 4 765 886 124 0 0 chr3L 23722770 23722907 -820650 + DNAREP1_DM LINE Penelope 1 137 -457 4 765 519 139 0 11 chr3L 23722890 23722977 -820580 + DMCR1A LINE CR1 2933 3018 -1452 4 765 368 265 76 22 chr3L 23723074 23723259 -820298 - MAX_LTR LTR Pao -40 281 87 4 765 498 17 17 0 chr3L 23723252 23723312 -820245 - MAX_I LTR Pao -725 7189 7129 4 765 2449 190 84 13 chr3L 23723310 23723833 -819724 - MAX_I LTR Pao -2578 5336 4777 4 765 387 111 0 0 chr3L 23723928 23723991 -819566 + S_DM DNA Tc1 41 103 -1633 4 95 1077 106 11 0 chr3L 23723992 23724171 -819386 + S_DM DNA Tc1 243 423 -1313 4 766 536 191 102 7 chr3L 23724169 23724306 -819251 - DMRT1A LINE R1 -4574 609 460 4 766 574 109 0 90 chr3L 23724416 23724527 -819030 - DNAREP1_DM LINE Penelope -493 101 1 4 766 1427 98 64 72 chr3L 23725720 23725984 -817573 + STALKER4_LTR LTR Gypsy 1 262 -140 4 766 3169 3 0 0 chr3L 23725984 23726330 -817227 + Invader4_LTR LTR Gypsy 1 346 0 4 766 15708 10 14 21 chr3L 23726330 23728168 -815389 + Invader4_I LTR Gypsy 1 1825 -588 4 766 1255 97 26 119 chr3L 23728207 23728510 -815047 + Invader4_I LTR Gypsy 2139 2413 0 4 766 2357 118 0 3 chr3L 23728510 23728857 -814700 + Invader4_LTR LTR Gypsy 1 346 0 4 766 22 94 0 0 chr3L 23728857 23728921 -814636 + AT_rich Low_complexity Low_complexity 1 64 0 4 766 4385 201 67 22 chr3L 23729099 23730075 -813482 + Gypsy_I LTR Gypsy 1349 2367 -4140 4 766 258 105 0 0 chr3L 23730084 23730122 -813435 + (CATA)n Simple_repeat Simple_repeat 3 40 0 4 766 1170 121 0 0 chr3L 23730124 23730978 -812579 + (TA)n Simple_repeat Simple_repeat 1 854 0 4 766 35 0 0 0 chr3L 23730986 23731021 -812536 + AT_rich Low_complexity Low_complexity 1 35 0 4 766 212 212 0 15 chr3L 23731464 23731531 -812026 + (CATA)n Simple_repeat Simple_repeat 3 68 0 4 766 234 250 123 91 chr3L 23731686 23731840 -811717 - DNAREP1_DM LINE Penelope -140 454 296 4 766 735 135 11 128 chr3L 23731846 23732025 -811532 + DNAREP1_DM LINE Penelope 34 191 -403 4 766 818 101 270 0 chr3L 23732033 23732192 -811365 + DNAREP1_DM LINE Penelope 388 589 -5 4 766 522 252 22 71 chr3L 23732528 23732754 -810803 + DNAREP1_DM LINE Penelope 32 246 -348 4 766 21 0 0 0 chr3L 23732765 23732786 -810771 + AT_rich Low_complexity Low_complexity 1 21 0 4 766 232 111 0 0 chr3L 23732836 23732872 -810685 + DNAREP1_DM LINE Penelope 1 36 -558 4 766 677 184 46 39 chr3L 23732854 23733007 -810550 - DNAREP1_DM LINE Penelope -134 460 307 4 766 1282 267 168 4 chr3L 23734787 23735457 -808100 + BEL_I LTR Pao 107 886 -4518 4 766 1034 134 18 0 chr3L 23735489 23735660 -807897 - DNAREP1_DM LINE Penelope -420 174 1 4 766 25 0 0 0 chr3L 23735660 23735685 -807872 + AT_rich Low_complexity Low_complexity 1 25 0 4 766 235 143 0 0 chr3L 23735710 23735745 -807812 - DNAREP1_DM LINE Penelope -547 47 13 4 766 968 98 76 65 chr3L 23736285 23736470 -807087 - DNAREP1_DM LINE Penelope -42 552 366 4 766 542 29 47 37 chr3L 23736494 23736601 -806956 + (TTATA)n Simple_repeat Simple_repeat 5 112 0 4 766 340 343 12 6 chr3L 23736908 23737075 -806482 - NOMAD_I LTR Gypsy -300 6272 6105 4 766 251 350 126 5 chr3L 23737713 23737928 -805629 - NOMAD_I LTR Gypsy -1084 5488 5248 4 766 365 310 49 0 chr3L 23737921 23738063 -805494 - NOMAD_I LTR Gypsy -1481 5091 4943 4 766 596 208 133 30 chr3L 23738171 23738404 -805153 + IDEFIX_LTR LTR Gypsy 286 542 -52 4 766 2295 145 66 48 chr3L 23738682 23739197 -804360 + DNAREP1_DM LINE Penelope 70 593 -1 4 766 339 106 0 0 chr3L 23740102 23740149 -803408 - DNAREP1_DM LINE Penelope -207 387 341 4 766 825 206 32 82 chr3L 23740330 23740610 -802947 - DNAREP1_DM LINE Penelope -105 489 224 4 766 34 79 0 0 chr3L 23742067 23742143 -801414 + AT_rich Low_complexity Low_complexity 1 76 0 4 766 698 360 82 18 chr3L 23742781 23743295 -800262 - Ulysses_I LTR Gypsy -681 5700 5154 4 766 759 333 24 16 chr3L 23743453 23743877 -799680 - Ulysses_I LTR Gypsy -1614 4767 4341 4 766 261 146 73 0 chr3L 23744293 23744348 -799209 + MDG1_I LTR Gypsy 714 772 -5824 4 766 549 135 0 0 chr3L 23744368 23744457 -799100 + DNAREP1_DM LINE Penelope 31 119 -475 4 766 233 69 0 0 chr3L 23744673 23744702 -798855 + G3_DM LINE Jockey 1 29 -4576 4 766 233 345 38 19 chr3L 23745352 23745565 -797992 + DIVER2_I LTR Pao 2867 3083 -1064 4 766 1275 328 19 4 chr3L 23745627 23746157 -797400 + DIVER2_I LTR Pao 3506 4043 -104 4 766 468 35 0 0 chr3L 23746799 23746856 -796701 + TRANSIB2 DNA Transib 577 633 -2211 4 766 1545 28 0 0 chr3L 23746855 23747037 -796520 + TRANSIB2 DNA Transib 837 1018 -1826 4 766 2311 38 7 7 chr3L 23747051 23747342 -796215 + TRANSIB2 DNA Transib 1177 1467 -1377 4 766 1780 51 79 0 chr3L 23747345 23747599 -795958 + TRANSIB2 DNA Transib 2571 2844 0 4 766 839 217 0 0 chr3L 23747641 23747825 -795732 + Gypsy11_I LTR Gypsy 1801 1984 -1540 4 766 322 208 57 130 chr3L 23747875 23748100 -795457 + Gypsy8_LTR LTR Gypsy 4 303 -1 4 766 289 219 55 0 chr3L 23748104 23748177 -795380 + LINEJ1_DM LINE Jockey 4610 4686 -334 4 766 10463 60 73 12 chr3L 23748195 23749665 -793892 + DMCR1A LINE CR1 7 1565 -2905 4 766 1567 89 26 4 chr3L 23749664 23749890 -793667 + DMCR1A LINE CR1 1841 2071 -2399 4 766 12189 34 34 0 chr3L 23749894 23751379 -792178 + DMCR1A LINE CR1 2869 4403 -67 4 766 639 200 67 36 chr3L 23751403 23751648 -791909 + DNAREP1_DM LINE Penelope 89 329 -265 4 766 1626 63 9 0 chr3L 23751962 23752184 -791373 + TRANSIB3 DNA Transib 34 257 -2626 4 766 1786 73 7 37 chr3L 23752184 23752453 -791104 + Invader2_LTR LTR Gypsy 1 261 -5 4 766 3515 56 0 11 chr3L 23752460 23752929 -790628 + TRANSIB3 DNA Transib 257 720 -2163 4 766 216 0 0 0 chr3L 23752929 23752953 -790604 + (A)n Simple_repeat Simple_repeat 1 24 0 4 766 42651 1 0 0 chr3L 23752958 23757680 -785877 + DOC LINE Jockey 4 4725 0 4 766 3237 63 5 5 chr3L 23757683 23758114 -785443 + TRANSIB3 DNA Transib 706 1136 -1747 4 766 845 99 0 16 chr3L 23758114 23758237 -785320 + TRANSIB3 DNA Transib 2179 2299 -584 4 766 2437 203 49 18 chr3L 23758333 23758889 -784668 - Gypsy8_I LTR Gypsy -1267 3080 2508 4 766 590 221 0 0 chr3L 23758929 23759051 -784506 - Gypsy8_I LTR Gypsy -1945 2402 2281 4 766 3551 98 183 70 chr3L 23759052 23760223 -783334 - Gypsy12A_LTR LTR Gypsy -1 2279 976 4 766 2495 81 119 16 chr3L 23760248 23760636 -782921 - Gypsy12A_LTR LTR Gypsy -1700 580 153 4 766 536 344 10 33 chr3L 23760627 23760928 -782629 - OSVALDO_I LTR Gypsy -4349 2304 2011 4 766 828 154 105 0 chr3L 23760944 23761106 -782451 - Gypsy8_I LTR Gypsy -3891 456 278 4 766 425 269 0 0 chr3L 23761221 23761340 -782217 - OSVALDO_I LTR Gypsy -6100 553 435 4 766 2182 237 80 18 chr3L 23762149 23762820 -780737 + DM412 LTR Gypsy 5633 6345 -552 4 766 659 125 219 17 chr3L 23762820 23763132 -780425 + DNAREP1_DM LINE Penelope 1 332 -262 4 766 25 65 0 0 chr3L 23764733 23764779 -778778 + AT_rich Low_complexity Low_complexity 1 46 0 4 766 1332 149 83 108 chr3L 23764807 23765227 -778330 + DNAREP1_DM LINE Penelope 1 332 -262 4 766 33 25 0 0 chr3L 23765304 23765344 -778213 + AT_rich Low_complexity Low_complexity 1 40 0 4 766 886 119 60 0 chr3L 23765501 23765652 -777905 + DNAREP1_DM LINE Penelope 1 160 -434 4 766 214 122 0 47 chr3L 23766023 23766066 -777491 + A-rich Low_complexity Low_complexity 3 43 0 4 766 1546 38 0 0 chr3L 23767027 23767213 -776344 - Transib5 DNA Transib -24 2977 2792 4 766 3243 41 14 0 chr3L 23767271 23767687 -775870 - Transib5 DNA Transib -211 2790 2369 4 766 6828 26 8 59 chr3L 23767685 23768651 -774906 - PROTOP_A DNA P -6 1099 183 4 766 47 0 0 0 chr3L 23769086 23769133 -774424 + AT_rich Low_complexity Low_complexity 1 47 0 4 766 21 36 0 0 chr3L 23769793 23769821 -773736 + AT_rich Low_complexity Low_complexity 1 28 0 4 766 295 311 36 67 chr3L 23770222 23770415 -773142 + Gypsy3_I LTR Gypsy 1179 1365 -4812 4 766 21 57 0 0 chr3L 23770849 23770884 -772673 + AT_rich Low_complexity Low_complexity 1 35 0 4 766 23 33 0 0 chr3L 23771208 23771238 -772319 + AT_rich Low_complexity Low_complexity 1 30 0 4 766 1131 335 48 43 chr3L 23771949 23772323 -771234 + Gypsy4_I LTR Gypsy 2431 2901 -3606 4 766 1564 28 19 0 chr3L 23772323 23772537 -771020 + TLD2 Unknown Unknown 1 218 0 4 766 1131 335 48 43 chr3L 23772537 23773176 -770381 + Gypsy4_I LTR Gypsy 2902 3709 -2798 4 766 246 292 49 49 chr3L 23773689 23773851 -769706 + GTWIN_I LTR Gypsy 4123 4284 -2137 4 766 43 0 0 0 chr3L 23775767 23775810 -767747 + AT_rich Low_complexity Low_complexity 1 43 0 4 766 1635 21 0 0 chr3L 23775826 23776012 -767545 - PROTOP_A DNA P -919 186 1 4 766 4302 36 13 0 chr3L 23776012 23776562 -766995 - Transib5 DNA Transib -663 2338 1782 4 766 3391 54 70 61 chr3L 23776572 23776596 -766961 - Transib5 DNA Transib -2442 559 535 4 766 249 33 0 0 chr3L 23776596 23776626 -766931 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 766 3391 54 70 61 chr3L 23776626 23777155 -766402 - Transib5 DNA Transib -2467 534 3 4 766 21 36 0 0 chr3L 23779796 23779824 -763733 + AT_rich Low_complexity Low_complexity 1 28 0 4 766 1568 112 199 3 chr3L 23780810 23781142 -762415 + DM297_I LTR Gypsy 4185 4581 -1586 4 766 429 105 0 38 chr3L 23781166 23781245 -762312 - G5A_DM LINE Jockey -8 2833 2758 4 766 319 87 0 0 chr3L 23781256 23781302 -762255 + BS2 LINE Jockey 11 56 -4665 4 766 5950 84 3 8 chr3L 23781300 23782149 -761408 + BS2 LINE Jockey 369 1213 -3508 4 766 2547 184 120 9 chr3L 23782154 23783048 -760509 + BS2 LINE Jockey 1430 2422 -2299 4 766 2062 66 14 14 chr3L 23783048 23783341 -760216 - G5A_DM LINE Jockey -445 2396 2104 4 766 10660 31 0 1 chr3L 23783340 23784648 -758909 + DMCR1A LINE CR1 347 1652 -2818 4 766 17550 31 13 4 chr3L 23784643 23786825 -756732 + DMCR1A LINE CR1 2027 4229 -241 4 766 561 314 35 0 chr3L 23786822 23787080 -756477 - G5_DM LINE Jockey -3922 934 668 4 766 34 24 0 0 chr3L 23787799 23787840 -755717 + AT_rich Low_complexity Low_complexity 1 41 0 4 766 444 164 172 0 chr3L 23788478 23788600 -754957 - Gypsy8_I LTR Gypsy -4190 157 15 4 766 764 154 22 20 chr3L 23788598 23788866 -754691 - DNAREP1_DM LINE Penelope -262 332 90 4 766 869 248 39 27 chr3L 23790264 23790600 -752957 - Gypsy_LTR LTR Gypsy -114 368 29 4 766 946 92 0 0 chr3L 23791539 23791670 -751887 - BS3_DM LINE Jockey -840 950 820 4 766 336 247 0 0 chr3L 23791666 23791755 -751802 - Stalker2_I LTR Gypsy -1597 5805 5717 4 766 664 201 6 29 chr3L 23791796 23791970 -751587 + DM297_I LTR Gypsy 2785 2954 -3213 4 766 3647 54 12 8 chr3L 23791947 23792429 -751128 - Baggins1 LINE LOA -4 5449 4966 4 766 798 47 9 0 chr3L 23792419 23792525 -751032 - Baggins1 LINE LOA -689 4764 4658 4 766 499 235 0 0 chr3L 23792565 23792680 -750877 - DM297_I LTR Gypsy -784 5328 5214 4 766 1891 183 93 26 chr3L 23792915 23793809 -749748 - DM297_I LTR Gypsy -1354 4813 3727 4 766 231 154 0 44 chr3L 23793854 23793922 -749635 - DM297_I LTR Gypsy -2602 3565 3501 4 766 2358 99 38 20 chr3L 23794245 23794645 -748912 - PROTOP_B DNA P -746 407 1 4 766 505 148 56 24 chr3L 23794809 23794934 -748623 + DM297_LTR LTR Gypsy 286 414 0 4 766 272 0 29 0 chr3L 23795421 23795456 -748101 + PROTOP_B DNA P 504 539 -614 4 766 21 0 0 0 chr3L 23796506 23796527 -747030 + AT_rich Low_complexity Low_complexity 1 21 0 4 766 43 64 0 0 chr3L 23796572 23796650 -746907 + AT_rich Low_complexity Low_complexity 1 78 0 4 766 4399 105 126 2 chr3L 23797171 23797956 -745601 - DMCR1A LINE CR1 -2 4468 3587 4 766 609 40 42 30 chr3L 23797953 23798088 -745469 - DMCR1A LINE CR1 -1255 3215 3037 4 766 4066 64 87 0 chr3L 23798094 23798690 -744867 - DMCR1A LINE CR1 -1555 2915 2268 4 766 1556 88 46 0 chr3L 23798696 23798936 -744621 - BS3_DM LINE Jockey -1 1789 1539 4 766 803 72 144 0 chr3L 23798929 23799054 -744503 - BS3_DM LINE Jockey -457 1333 1191 4 766 4211 63 83 0 chr3L 23799065 23799668 -743889 - BS3_DM LINE Jockey -983 807 155 4 766 368 208 0 0 chr3L 23799690 23799767 -743790 - BS2 LINE Jockey -1776 2945 2869 4 766 285 312 0 0 chr3L 23799802 23799898 -743659 - BS2 LINE Jockey -2538 2183 2088 4 766 3566 104 55 14 chr3L 23799902 23800486 -743071 - BS2 LINE Jockey -2741 1980 1373 4 766 2006 95 36 7 chr3L 23800481 23800787 -742770 - BS2 LINE Jockey -4209 512 198 4 766 11967 53 84 12 chr3L 23800783 23802508 -741049 - DMCR1A LINE CR1 -2275 2195 347 4 766 2097 65 10 14 chr3L 23802507 23802801 -740756 + G5A_DM LINE Jockey 2104 2396 -445 4 766 5505 171 25 8 chr3L 23802801 23803873 -739684 - BS2 LINE Jockey -2299 2422 1332 4 766 727 144 0 6 chr3L 23804165 23804326 -739231 - DM297_I LTR Gypsy -388 5779 5620 4 766 337 175 83 55 chr3L 23804367 23804476 -739081 + G5_DM LINE Jockey 385 496 -4360 4 766 792 314 28 0 chr3L 23804503 23804828 -738729 + G5_DM LINE Jockey 601 934 -3922 4 766 4136 78 48 10 chr3L 23804825 23805444 -738113 - DMCR1A LINE CR1 -241 4229 3587 4 766 709 45 0 30 chr3L 23805442 23805581 -737976 - DMCR1A LINE CR1 -1256 3214 3039 4 766 3580 67 147 0 chr3L 23805589 23806154 -737403 - DMCR1A LINE CR1 -1555 2915 2268 4 766 1556 88 46 0 chr3L 23806160 23806400 -737157 - BS3_DM LINE Jockey -1 1789 1539 4 766 853 56 144 0 chr3L 23806393 23806518 -737039 - BS3_DM LINE Jockey -457 1333 1191 4 766 4211 87 83 2 chr3L 23806529 23807231 -736326 - BS3_DM LINE Jockey -983 807 155 4 766 1618 291 38 5 chr3L 23807224 23807852 -735705 - BS3_DM LINE Jockey -1798 2923 2275 4 766 347 283 53 0 chr3L 23807876 23807989 -735568 - BS3_DM LINE Jockey -2518 2203 2085 4 766 697 161 105 0 chr3L 23809239 23809382 -734175 - BS3_DM LINE Jockey -2766 1955 1798 4 766 21 0 0 0 chr3L 23810478 23810499 -733058 + AT_rich Low_complexity Low_complexity 1 21 0 4 766 26 0 0 0 chr3L 23811269 23811295 -732262 + AT_rich Low_complexity Low_complexity 1 26 0 4 766 4208 108 196 3 chr3L 23811935 23812944 -730613 - BS3_DM LINE Jockey -3062 1659 456 4 766 7185 74 92 3 chr3L 23812969 23814520 -729037 - G5A_DM LINE Jockey -8 2833 1145 4 766 1704 127 37 9 chr3L 23814519 23814927 -728630 - BS2 LINE Jockey -3950 771 322 4 766 2526 80 16 0 chr3L 23815074 23815437 -728120 - BS2 LINE Jockey -341 4380 4012 4 766 5295 69 12 17 chr3L 23815417 23816168 -727389 - BS2 LINE Jockey -2127 2594 1848 4 766 464 269 26 20 chr3L 23816168 23816320 -727237 - BS2 LINE Jockey -3791 930 778 4 766 673 152 261 78 chr3L 23816698 23816955 -726602 - BS2 LINE Jockey -4404 317 14 4 766 1213 145 261 27 chr3L 23817600 23817935 -725622 + DNAREP1_DM LINE Penelope 167 578 -16 4 766 2020 20 16 0 chr3L 23817951 23818204 -725353 - DM176_LTR LTR Gypsy 0 507 251 4 766 2208 7 0 78 chr3L 23818205 23818512 -725045 - DM176_LTR LTR Gypsy -224 283 1 4 766 2971 5 0 0 chr3L 23818512 23818879 -724678 - DM176_I LTR Gypsy 0 6420 6054 4 766 47700 9 8 11 chr3L 23818853 23824770 -718787 - DM176_I LTR Gypsy -520 5900 1 4 766 2016 20 16 0 chr3L 23824770 23825023 -718534 - DM176_LTR LTR Gypsy 0 507 251 4 766 2208 7 0 78 chr3L 23825024 23825331 -718226 - DM176_LTR LTR Gypsy -224 283 1 4 766 216 0 0 0 chr3L 23825332 23825356 -718201 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 766 4633 9 35 0 chr3L 23825356 23825929 -717628 - IDEFIX_LTR LTR Gypsy -1 593 1 4 766 46829 6 0 1 chr3L 23825929 23831561 -711996 - IDEFIX_I LTR Gypsy 0 5628 1 4 766 25 0 0 0 chr3L 23831942 23831967 -711590 + AT_rich Low_complexity Low_complexity 1 25 0 4 766 4642 9 35 0 chr3L 23832156 23832730 -710827 - IDEFIX_LTR LTR Gypsy 0 594 1 4 766 450 49 0 0 chr3L 23832730 23832791 -710766 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 766 401 72 0 18 chr3L 23833863 23833920 -709637 - PROTOP_A DNA P -1 1104 1048 4 766 5730 26 126 10 chr3L 23833911 23834733 -708824 - PROTOP_A DNA P -187 918 1 4 766 1943 152 52 119 chr3L 23834940 23835530 -708027 + DNAREP1_DM LINE Penelope 5 555 -39 4 766 749 106 109 71 chr3L 23835540 23835723 -707834 + Gypsy6_LTR LTR Gypsy 1 190 -217 4 766 7256 241 72 50 chr3L 23835742 23838584 -704973 + Gypsy2_I LTR Gypsy 1951 4920 -1257 4 766 777 195 0 7 chr3L 23838582 23838737 -704820 + Gypsy2_I LTR Gypsy 5272 5425 -752 4 766 799 210 0 6 chr3L 23838729 23838897 -704660 + Gypsy2_I LTR Gypsy 5540 5706 -471 4 766 608 170 80 88 chr3L 23838913 23839139 -704418 + Gypsy6_LTR LTR Gypsy 72 295 -112 4 766 1033 166 5 31 chr3L 23839813 23840037 -703520 - DNAREP1_DM LINE Penelope -180 414 197 4 766 301 305 43 78 chr3L 23840366 23840736 -702821 - Invader2_I LTR Gypsy -647 3945 3589 4 766 6503 22 1 1 chr3L 23841964 23842752 -700805 + R1_DM LINE R1 4569 5356 0 4 766 1645 176 70 16 chr3L 23843162 23843549 -700008 + DM297_I LTR Gypsy 3511 3918 -2249 4 766 653 130 0 9 chr3L 23843570 23843686 -699871 + DM297_I LTR Gypsy 4019 4133 -2034 4 766 11981 75 18 9 chr3L 23843683 23845504 -698053 + I_DM LINE I 3627 5464 -767 4 766 907 258 92 40 chr3L 23845523 23846602 -696955 + DM297_I LTR Gypsy 4151 5939 -645 4 766 700 235 26 30 chr3L 23846594 23846862 -696695 + DM297_I LTR Gypsy 5455 5721 -391 4 766 27 0 0 0 chr3L 23846988 23847015 -696542 + AT_rich Low_complexity Low_complexity 1 27 0 4 766 512 277 71 5 chr3L 23848210 23848406 -695151 - DIVER2_I LTR Pao -3195 952 744 4 766 20642 21 6 0 chr3L 23849906 23852376 -691181 + DMCR1A LINE CR1 695 3178 -1292 4 766 2472 36 148 6 chr3L 23852381 23852739 -690818 + DMCR1A LINE CR1 3435 3843 -627 4 766 2201 45 3 0 chr3L 23852733 23853022 -690535 + DMCR1A LINE CR1 4181 4470 0 4 766 675 146 0 0 chr3L 23853025 23853155 -690402 + Gypsy8_I LTR Gypsy 1918 2047 -2300 4 766 42 20 0 0 chr3L 23853736 23853785 -689772 + AT_rich Low_complexity Low_complexity 1 49 0 4 767 54 29 0 0 chr3L 23855664 23855732 -687825 + AT_rich Low_complexity Low_complexity 1 68 0 4 767 1186 148 75 16 chr3L 23856493 23856746 -686811 + DMCR1A LINE CR1 2369 2636 -1834 4 767 1609 112 87 4 chr3L 23856762 23857039 -686518 + DMCR1A LINE CR1 2722 3021 -1449 4 767 662 120 19 0 chr3L 23857069 23857177 -686380 + DMCR1A LINE CR1 3291 3400 -1070 4 767 900 154 43 0 chr3L 23857174 23857336 -686221 + DMCR1A LINE CR1 3556 3724 -746 4 767 632 157 0 0 chr3L 23857339 23857447 -686110 + DMCR1A LINE CR1 4017 4124 -346 4 767 387 312 140 13 chr3L 23857454 23857824 -685733 + Gypsy6_I LTR Gypsy 3750 4016 -2996 4 767 299 303 0 0 chr3L 23858769 23858868 -684689 - DIVER2_I LTR Pao -2729 1418 1320 4 767 264 301 38 19 chr3L 23859420 23859579 -683978 - MDG3_I LTR Gypsy -1562 3424 3263 4 767 277 317 58 62 chr3L 23859966 23860526 -683031 - Invader3_I LTR Gypsy -1885 2596 2180 4 767 21 0 0 0 chr3L 23864267 23864288 -679269 + AT_rich Low_complexity Low_complexity 1 21 0 4 767 210 158 0 0 chr3L 23864872 23864910 -678647 + A-rich Low_complexity Low_complexity 1 38 0 4 767 626 99 0 0 chr3L 23864954 23865045 -678512 + DNAREP1_DM LINE Penelope 500 590 -4 4 767 1100 115 51 23 chr3L 23865199 23865413 -678144 + DNAREP1_DM LINE Penelope 1 220 -374 4 767 903 152 55 10 chr3L 23865406 23865606 -677951 + DNAREP1_DM LINE Penelope 124 332 -262 4 767 1501 169 13 132 chr3L 23865606 23866077 -677480 + DNAREP1_DM LINE Penelope 84 498 -96 4 767 523 115 0 210 chr3L 23866088 23866231 -677326 - DNAREP1_DM LINE Penelope -481 113 1 4 767 24 0 0 0 chr3L 23867025 23867049 -676508 + AT_rich Low_complexity Low_complexity 1 24 0 4 767 960 197 151 29 chr3L 23867646 23867991 -675566 + DNAREP1_DM LINE Penelope 1 387 -207 4 767 22 0 0 0 chr3L 23868991 23869013 -674544 + AT_rich Low_complexity Low_complexity 1 22 0 4 767 367 367 28 28 chr3L 23869169 23869601 -673956 - LINEJ1_DM LINE Jockey -406 4614 4183 4 767 3132 282 24 19 chr3L 23870129 23871266 -672291 + Gypsy4_I LTR Gypsy 2137 3278 -3010 4 767 3438 305 12 10 chr3L 23871541 23872996 -670561 + Gypsy4_I LTR Gypsy 3286 4744 -1544 4 767 313 308 50 76 chr3L 23873305 23873646 -669911 + Gypsy4_I LTR Gypsy 5120 5451 -837 4 767 27 0 0 0 chr3L 23873864 23873891 -669666 + AT_rich Low_complexity Low_complexity 1 27 0 4 767 310 71 0 0 chr3L 23874416 23874458 -669099 - DNAREP1_DM LINE Penelope -552 42 1 4 767 819 330 44 12 chr3L 23875077 23875556 -668001 - NOMAD_I LTR Gypsy 0 6572 6079 4 767 1104 309 60 2 chr3L 23876635 23877131 -666426 - NOMAD_I LTR Gypsy -1305 5267 4743 4 767 318 82 58 12 chr3L 23877291 23877377 -666180 + (TA)n Simple_repeat Simple_repeat 2 91 0 4 767 1699 0 0 0 chr3L 23877393 23877591 -665966 - Copia2_LTR_DM LTR Copia 0 198 1 4 767 20327 7 14 2 chr3L 23877591 23879979 -663578 - Copia2_I LTR Copia 0 4162 1746 4 767 7624 10 0 52 chr3L 23879978 23880971 -662586 - Copia2_I LTR Copia -2567 1595 655 4 767 2183 26 0 0 chr3L 23880971 23881237 -662320 + Invader2_LTR LTR Gypsy 1 266 0 4 767 5203 16 30 0 chr3L 23881237 23881876 -661681 - Copia2_I LTR Copia -3504 658 1 4 767 1660 0 5 0 chr3L 23881876 23882073 -661484 - Copia2_LTR_DM LTR Copia 0 198 1 4 767 46 62 0 0 chr3L 23882079 23882160 -661397 + AT_rich Low_complexity Low_complexity 1 81 0 4 767 5709 46 51 28 chr3L 23883350 23884230 -659327 - PROTOP_B DNA P -1 1152 253 4 767 21 89 0 0 chr3L 23884350 23884406 -659151 + AT_rich Low_complexity Low_complexity 1 56 0 4 767 271 177 125 12 chr3L 23884976 23885056 -658501 + MDG1_I LTR Gypsy 981 1069 -5527 4 767 257 176 132 0 chr3L 23885075 23885143 -658414 + MDG1_I LTR Gypsy 1671 1747 -4849 4 767 1355 312 81 8 chr3L 23885222 23885927 -657630 - BEL_I LTR Pao -1998 3406 2651 4 767 712 267 88 8 chr3L 23886052 23886301 -657256 - BEL_I LTR Pao -3039 2365 2097 4 767 894 155 26 5 chr3L 23886453 23886648 -656909 - DOC3_DM LINE Jockey -4 4736 4538 4 767 339 196 167 9 chr3L 23886702 23886810 -656747 - DOC3_DM LINE Jockey -344 4396 4272 4 767 277 250 0 0 chr3L 23886876 23886944 -656613 - DOC3_DM LINE Jockey -1138 3602 3535 4 767 670 241 187 19 chr3L 23886982 23887352 -656205 - DOC3_DM LINE Jockey -2031 2709 2278 4 767 495 233 9 0 chr3L 23887351 23887467 -656090 - DOC3_DM LINE Jockey -2597 2143 2027 4 767 299 143 0 18 chr3L 23887495 23887552 -656005 + Gypsy8_LTR LTR Gypsy 1 56 -248 4 767 426 222 0 100 chr3L 23887598 23887758 -655799 + Gypsy8_LTR LTR Gypsy 161 304 0 4 767 338 205 13 0 chr3L 23887758 23887836 -655721 + Gypsy8_I LTR Gypsy 1 79 -4268 4 767 331 247 6 76 chr3L 23887934 23888105 -655452 + Gypsy8_I LTR Gypsy 68 226 -4121 4 767 679 138 95 68 chr3L 23888612 23888760 -654797 - DNAREP1_DM LINE Penelope 0 594 443 4 767 651 136 8 8 chr3L 23888754 23888873 -654684 - DNAREP1_DM LINE Penelope -257 337 219 4 767 1611 85 73 0 chr3L 23888881 23889139 -654418 - DMCR1A LINE CR1 0 4470 4194 4 767 1491 0 39 0 chr3L 23889139 23889318 -654239 - POGON1 DNA Pogo 0 186 1 4 767 3287 90 115 25 chr3L 23889319 23889877 -653680 - DMCR1A LINE CR1 -276 4194 3587 4 767 771 44 326 0 chr3L 23889874 23890009 -653548 - DMCR1A LINE CR1 -1255 3215 3037 4 767 4329 67 52 0 chr3L 23890015 23890631 -652926 - DMCR1A LINE CR1 -1555 2915 2268 4 767 1581 83 46 0 chr3L 23890638 23890878 -652679 - BS3_DM LINE Jockey -1 1789 1539 4 767 853 56 144 0 chr3L 23890871 23890996 -652561 - BS3_DM LINE Jockey -457 1333 1191 4 767 2331 44 183 0 chr3L 23891007 23891605 -651952 - BS3_DM LINE Jockey -983 807 101 4 767 368 208 0 0 chr3L 23891603 23891680 -651877 - BS2 LINE Jockey -1776 2945 2869 4 767 285 312 0 0 chr3L 23891715 23891811 -651746 - BS2 LINE Jockey -2538 2183 2088 4 767 3577 102 55 14 chr3L 23891815 23892399 -651158 - BS2 LINE Jockey -2741 1980 1373 4 767 2006 95 36 7 chr3L 23892394 23892700 -650857 - BS2 LINE Jockey -4209 512 198 4 767 12428 51 66 12 chr3L 23892696 23894450 -649107 - DMCR1A LINE CR1 -2275 2195 347 4 767 2097 65 10 14 chr3L 23894449 23894743 -648814 + G5A_DM LINE Jockey 2104 2396 -445 4 767 5459 174 25 8 chr3L 23894743 23895815 -647742 - BS2 LINE Jockey -2299 2422 1332 4 767 577 310 35 0 chr3L 23896178 23896436 -647121 + G5_DM LINE Jockey 668 934 -3922 4 767 10758 34 38 4 chr3L 23896433 23897804 -645753 - DMCR1A LINE CR1 -241 4229 2813 4 767 2145 101 106 0 chr3L 23897804 23898162 -645395 - DMCR1A LINE CR1 -488 3982 3587 4 767 609 46 52 37 chr3L 23898159 23898294 -645263 - DMCR1A LINE CR1 -1255 3215 3037 4 767 5291 40 19 30 chr3L 23898300 23899027 -644530 - DMCR1A LINE CR1 -1555 2915 2197 4 767 1972 77 9 19 chr3L 23899014 23899331 -644226 - DMCR1A LINE CR1 -4156 314 1 4 767 302 135 0 0 chr3L 23899478 23899530 -644027 + DNAREP1_DM LINE Penelope 1 52 -542 4 767 450 297 22 22 chr3L 23899629 23899808 -643749 - LINEJ1_DM LINE Jockey -1117 3903 3725 4 767 261 317 40 40 chr3L 23900017 23900165 -643392 - Jockey2 LINE Jockey -1637 1791 1644 4 767 329 187 0 0 chr3L 23900598 23900673 -642884 + I_DM LINE I 2655 2729 -3502 4 767 555 15 0 0 chr3L 23900672 23900738 -642819 + PROTOP_B DNA P 1088 1153 0 4 767 889 192 20 0 chr3L 23901260 23901463 -642094 + I_DM LINE I 2678 2884 -3347 4 767 262 223 161 0 chr3L 23901493 23901605 -641952 + I_DM LINE I 3031 3160 -3071 4 767 312 138 15 15 chr3L 23901615 23901681 -641876 + I_DM LINE I 4086 4151 -2080 4 767 1340 217 58 73 chr3L 23901668 23902135 -641422 + I_DM LINE I 4587 5046 -1185 4 767 815 329 19 12 chr3L 23902465 23902890 -640667 - DIVER2_I LTR Pao -557 3590 3163 4 767 2114 50 116 3 chr3L 23903166 23903484 -640073 + TC1_DM DNA Tc1 158 511 -1155 4 767 1562 46 0 0 chr3L 23903476 23903673 -639884 + TC1_DM DNA Tc1 655 851 -815 4 767 827 35 61 0 chr3L 23903671 23903785 -639772 + TC1_DM DNA Tc1 1036 1156 -510 4 767 398 182 102 0 chr3L 23903790 23903878 -639679 - G3_DM LINE Jockey -4366 239 143 4 767 21 0 0 0 chr3L 23904814 23904835 -638722 + AT_rich Low_complexity Low_complexity 1 21 0 4 767 645 86 0 0 chr3L 23904911 23905004 -638553 - G3_DM LINE Jockey -4512 93 1 4 767 4430 104 24 35 chr3L 23905621 23906415 -637142 - S_DM DNA Tc1 -15 1721 937 4 767 21 57 0 0 chr3L 23906800 23906835 -636722 + AT_rich Low_complexity Low_complexity 1 35 0 4 767 9929 55 53 14 chr3L 23906996 23908404 -635153 + DMCR1A LINE CR1 132 1594 -2876 4 767 2659 61 8 3 chr3L 23908410 23908772 -634785 - Gypsy10_LTR LTR Gypsy 0 364 1 4 767 539 48 0 98 chr3L 23908772 23908864 -634693 - Gypsy10_I LTR Gypsy 0 5278 5196 4 767 16634 183 18 22 chr3L 23909042 23915303 -628254 - Gypsy10_I LTR Gypsy -291 5997 1 4 767 2437 66 9 3 chr3L 23915303 23915639 -627918 - Gypsy10_LTR LTR Gypsy 0 364 27 4 767 3229 69 91 16 chr3L 23915638 23916142 -627415 + DMCR1A LINE CR1 1654 2195 -2275 4 767 2006 95 36 7 chr3L 23916138 23916444 -627113 + BS2 LINE Jockey 198 512 -4209 4 767 3577 102 55 14 chr3L 23916439 23917023 -626534 + BS2 LINE Jockey 1373 1980 -2741 4 767 285 312 0 0 chr3L 23917027 23917123 -626434 + BS2 LINE Jockey 2088 2183 -2538 4 767 368 208 0 0 chr3L 23917158 23917235 -626322 + BS2 LINE Jockey 2869 2945 -1776 4 767 2315 45 183 0 chr3L 23917233 23917831 -625726 + BS3_DM LINE Jockey 101 807 -983 4 767 853 56 144 0 chr3L 23917842 23917967 -625590 + BS3_DM LINE Jockey 1191 1333 -457 4 767 1581 83 46 0 chr3L 23917960 23918200 -625357 + BS3_DM LINE Jockey 1539 1789 -1 4 767 4332 65 52 0 chr3L 23918207 23918823 -624734 + DMCR1A LINE CR1 2268 2915 -1555 4 767 609 40 42 30 chr3L 23918829 23918964 -624593 + DMCR1A LINE CR1 3037 3215 -1255 4 767 4433 98 133 3 chr3L 23918961 23919743 -623814 + DMCR1A LINE CR1 3587 4470 0 4 767 43 64 0 0 chr3L 23920262 23920340 -623217 + AT_rich Low_complexity Low_complexity 1 78 0 4 767 272 0 29 0 chr3L 23921456 23921491 -622066 - PROTOP_B DNA P -614 539 504 4 767 481 156 56 24 chr3L 23921978 23922103 -621454 - DM297_LTR LTR Gypsy 0 414 286 4 767 2358 99 38 20 chr3L 23922267 23922667 -620890 + PROTOP_B DNA P 1 407 -746 4 767 23 33 0 0 chr3L 23923037 23923067 -620490 + AT_rich Low_complexity Low_complexity 1 30 0 4 767 3602 173 117 8 chr3L 23923103 23924083 -619474 + DM297_I LTR Gypsy 3727 4813 -1354 4 767 499 235 0 0 chr3L 23924371 23924486 -619071 + TOM_I LTR Gypsy 5214 5328 -784 4 767 798 47 9 0 chr3L 23924527 23924633 -618924 + Baggins1 LINE LOA 4658 4764 -689 4 767 3647 54 12 8 chr3L 23924623 23925105 -618452 + Baggins1 LINE LOA 4966 5449 -4 4 767 1625 182 76 12 chr3L 23925082 23925504 -618053 - DM297_I LTR Gypsy -3213 2954 2506 4 767 454 105 139 0 chr3L 23925914 23926000 -617557 - DNAREP1_DM LINE Penelope -3 591 494 4 767 1883 41 11 7 chr3L 23926772 23927042 -616515 - DMCR1A LINE CR1 -4199 271 1 4 767 239 43 326 0 chr3L 23928302 23928347 -615210 - DNAREP1_DM LINE Penelope -215 379 320 4 767 1895 48 93 0 chr3L 23928347 23928700 -614857 + ROOA_LTR LTR Pao 1 386 0 4 767 1773 115 48 3 chr3L 23928700 23929010 -614547 - DNAREP1_DM LINE Penelope -270 324 1 4 767 244 257 43 0 chr3L 23929015 23929085 -614472 + PROTOP_A DNA P 78 150 -955 4 767 36 40 0 0 chr3L 23929119 23929169 -614388 + AT_rich Low_complexity Low_complexity 1 50 0 4 767 336 272 0 34 chr3L 23929209 23929327 -614230 - HMSBEAGLE_I LTR Gypsy -2037 4492 4379 4 767 457 278 7 7 chr3L 23929393 23929597 -613960 - HMSBEAGLE_I LTR Gypsy -2249 4280 4106 4 767 538 299 5 0 chr3L 23929805 23930002 -613555 - Gypsy4_I LTR Gypsy -3606 2682 2485 4 767 406 292 20 0 chr3L 23930008 23930155 -613402 - HMSBEAGLE_I LTR Gypsy -3090 3439 3290 4 767 3795 51 137 10 chr3L 23930503 23931186 -612371 + DOC3_DM LINE Jockey 62 831 -3909 4 767 1960 31 236 0 chr3L 23931184 23931573 -611984 + DOC3_DM LINE Jockey 1000 1480 -3260 4 767 970 17 0 0 chr3L 23931572 23931687 -611870 + DOC3_DM LINE Jockey 2447 2561 -2179 4 767 11944 27 35 1 chr3L 23931690 23933198 -610359 + DOC3_DM LINE Jockey 3054 4612 -128 4 767 352 105 66 0 chr3L 23933206 23933282 -610275 + DMCR1A LINE CR1 185 265 -4205 4 767 2086 71 0 0 chr3L 23933287 23933570 -609987 + DMCR1A LINE CR1 430 712 -3758 4 767 373 143 0 0 chr3L 23933569 23933639 -609918 + Transib-N1_DM DNA Transib 436 505 -9 4 767 409 170 0 33 chr3L 23934238 23934329 -609228 + SAR_DM Satellite Satellite 565 652 -820 4 767 265 282 0 0 chr3L 23934413 23934491 -609066 - Gypsy8_I LTR Gypsy -1997 2350 2273 4 767 503 66 105 0 chr3L 23935568 23935643 -607914 - DNAREP1_DM LINE Penelope -3 591 509 4 767 2824 12 0 0 chr3L 23935643 23935973 -607584 - TRANSPAC_LTR LTR Gypsy 0 330 1 4 767 38760 2 0 0 chr3L 23935972 23940562 -602995 - TRANSPAC_I LTR Gypsy 0 4590 1 4 767 2824 12 0 0 chr3L 23940562 23940892 -602665 - TRANSPAC_LTR LTR Gypsy 0 330 1 4 767 456 105 90 26 chr3L 23940903 23940981 -602576 - DNAREP1_DM LINE Penelope -107 487 405 4 767 370 136 0 0 chr3L 23941022 23941088 -602469 - DNAREP1_DM LINE Penelope -156 438 373 4 767 378 161 11 0 chr3L 23941103 23941190 -602367 - DNAREP1_DM LINE Penelope -299 295 208 4 767 505 84 0 0 chr3L 23941255 23941326 -602231 - DNAREP1_DM LINE Penelope -523 71 1 4 767 22 0 0 0 chr3L 23941382 23941404 -602153 + AT_rich Low_complexity Low_complexity 1 22 0 4 767 376 271 9 9 chr3L 23942496 23942604 -600953 + IVK_DM LINE I 521 628 -4774 4 767 466 316 10 5 chr3L 23942605 23942799 -600758 + IVK_DM LINE I 816 1010 -4392 4 767 971 131 87 39 chr3L 23942831 23943061 -600496 + DNAREP1_DM LINE Penelope 92 332 -262 4 767 584 129 0 10 chr3L 23943031 23943133 -600424 + DNAREP1_DM LINE Penelope 175 275 -319 4 767 10004 37 43 0 chr3L 23943124 23944380 -599177 + PROTOP DNA P 639 1948 -2532 4 767 15686 26 45 6 chr3L 23944389 23946300 -597257 + PROTOP DNA P 2495 4480 0 4 767 500 129 0 31 chr3L 23946300 23946395 -597162 + G4_DM LINE Jockey 3765 3856 0 4 767 823 276 116 5 chr3L 23947213 23947643 -595914 + BS3_DM LINE Jockey 2334 2811 -1910 4 767 5156 76 70 2 chr3L 23947678 23948436 -595121 + BS3_DM LINE Jockey 155 873 -917 4 767 3166 42 261 2 chr3L 23948436 23948912 -594645 + BS3_DM LINE Jockey 1191 1789 -1 4 767 880 197 178 0 chr3L 23948992 23949205 -594352 + DM297_I LTR Gypsy 502 752 -5415 4 767 4629 146 4 3 chr3L 23949250 23950006 -593551 - FW_DM LINE Jockey -1353 3339 2583 4 767 3341 137 63 14 chr3L 23949979 23950671 -592886 - FW_DM LINE Jockey -2234 2458 1642 4 767 225 0 0 0 chr3L 23950686 23950711 -592846 + (TTTAG)n Simple_repeat Simple_repeat 3 27 0 4 767 2868 148 194 44 chr3L 23950721 23951864 -591693 - FW_DM LINE Jockey -3294 1398 85 4 767 22 56 0 0 chr3L 23951968 23952004 -591553 + AT_rich Low_complexity Low_complexity 1 36 0 4 767 659 295 96 7 chr3L 23952577 23952914 -590643 + HMSBEAGLE_I LTR Gypsy 4106 4447 -2082 4 767 623 191 0 0 chr3L 23953014 23953129 -590428 - PROTOP_B DNA P -953 200 86 4 767 307 167 0 0 chr3L 23953158 23953218 -590339 + DNAREP1_DM LINE Penelope 129 188 -406 4 767 1069 143 163 0 chr3L 23953235 23953438 -590119 + DNAREP1_DM LINE Penelope 273 508 -86 4 767 1561 78 155 16 chr3L 23953426 23953780 -589777 + DMTOM1_LTR LTR Gypsy 8 410 0 4 767 730 53 0 40 chr3L 23953780 23953879 -589678 + DNAREP1_DM LINE Penelope 500 594 0 4 767 1783 175 102 12 chr3L 23953940 23954582 -588975 + DM297_I LTR Gypsy 2231 3019 -3148 4 767 228 220 51 0 chr3L 23954588 23954647 -588910 + TOM_I LTR Gypsy 2998 3059 -3053 4 767 649 329 44 34 chr3L 23954820 23955295 -588262 + G6_DM LINE Jockey 874 1353 -689 4 767 241 91 0 0 chr3L 23955332 23955365 -588192 + Transib5 DNA Transib 3 35 -2966 4 767 2388 87 25 36 chr3L 23955366 23955758 -587799 + Transib5 DNA Transib 203 590 -2411 4 767 1938 25 13 0 chr3L 23955758 23955993 -587564 + Transib5 DNA Transib 1996 2233 -768 4 767 694 345 41 29 chr3L 23956144 23956730 -586827 + G_DM LINE Jockey 350 942 -2160 4 767 1675 300 110 63 chr3L 23956844 23958706 -584851 + G_DM LINE Jockey 1149 4195 -151 4 767 5599 169 92 20 chr3L 23958705 23959036 -584521 + DM297_I LTR Gypsy 3272 3616 -2551 4 767 186 71 0 0 chr3L 23959036 23959064 -584493 + (TATAA)n Simple_repeat Simple_repeat 2 29 0 4 767 5599 198 134 18 chr3L 23959064 23960122 -583435 + DM297_I LTR Gypsy 3617 4813 -1354 4 767 327 268 34 63 chr3L 23960334 23960509 -583048 + DM297_I LTR Gypsy 5222 5391 -721 4 767 664 266 4 21 chr3L 23960524 23960766 -582791 + DM297_I LTR Gypsy 5485 5722 -390 4 767 238 299 56 28 chr3L 23960768 23961019 -582538 + DM297_I LTR Gypsy 5841 6098 -69 4 767 850 129 93 0 chr3L 23961035 23961174 -582383 - DNAREP1_DM LINE Penelope -149 445 294 4 767 472 259 20 0 chr3L 23961417 23961564 -581993 + P_DG DNA P 2739 2888 0 4 767 2140 97 42 95 chr3L 23961433 23961935 -581622 - DNAREP1_DM LINE Penelope 0 594 1 4 767 737 212 78 11 chr3L 23961953 23962144 -581413 - Gypsy12A_LTR LTR Gypsy 0 2280 2077 4 767 256 159 0 0 chr3L 23962377 23962421 -581136 - Gypsy8_I LTR Gypsy -4303 44 1 4 767 280 269 99 89 chr3L 23962486 23963102 -580455 - Gypsy12A_LTR LTR Gypsy -667 1613 1000 4 767 419 252 17 17 chr3L 23963620 23963737 -579820 + Copia2_I LTR Copia 116 232 -3930 4 767 359 332 43 8 chr3L 23963813 23964071 -579486 + Copia2_I LTR Copia 966 1232 -2930 4 767 1750 111 0 0 chr3L 23964091 23964334 -579223 - DMRT1B LINE R1 -91 5092 4850 4 767 4254 123 31 3 chr3L 23964332 23964985 -578572 - DMRT1B LINE R1 -589 4594 3924 4 767 1030 69 189 0 chr3L 23964982 23965141 -578416 - DMRT1B LINE R1 -1756 3427 3239 4 767 6134 125 91 2 chr3L 23965141 23966456 -577101 - DMRT1B LINE R1 -2261 2922 1492 4 767 1113 306 35 14 chr3L 23966587 23967018 -576539 + Copia2_I LTR Copia 3164 3603 -559 4 767 275 320 0 0 chr3L 23967082 23967182 -576375 + Copia2_I LTR Copia 3707 3806 -356 4 767 326 298 21 14 chr3L 23967207 23967350 -576207 + Copia2_I LTR Copia 3912 4055 -107 4 767 622 144 35 18 chr3L 23967811 23967924 -575633 + DNAREP1_DM LINE Penelope 2 116 -478 4 767 252 229 191 0 chr3L 23967934 23968026 -575531 + DNAREP1_DM LINE Penelope 5 116 -478 4 767 1224 184 45 71 chr3L 23968026 23968414 -575143 + DNAREP1_DM LINE Penelope 1 295 -299 4 767 638 139 90 48 chr3L 23968409 23968575 -574982 - Gypsy12A_LTR LTR Gypsy -510 1770 1598 4 767 6025 6 0 0 chr3L 23968583 23969241 -574316 + QUASIMODO_LTR LTR Gypsy 1 658 0 4 767 997 187 104 67 chr3L 23969241 23969539 -574018 - Gypsy12A_LTR LTR Gypsy -667 1613 1305 4 767 1836 105 185 9 chr3L 23969552 23969887 -573670 - Gypsy12A_LTR LTR Gypsy -1886 394 1 4 767 33 56 0 0 chr3L 23969887 23969941 -573616 + AT_rich Low_complexity Low_complexity 1 54 0 4 767 244 45 87 43 chr3L 23969999 23970045 -573512 + BARI1 DNA Tc1 52 99 -1651 4 767 260 100 0 0 chr3L 23970044 23970084 -573473 - BARI1 DNA Tc1 -1669 81 42 4 767 585 210 31 57 chr3L 23970082 23970274 -573283 + DMCR1A LINE CR1 2445 2631 -1839 4 767 1054 180 53 0 chr3L 23970294 23970500 -573057 - DNAREP1_DM LINE Penelope -104 490 274 4 767 10253 54 48 1 chr3L 23970497 23971816 -571741 + DMRT1A LINE R1 3509 4888 -295 4 767 1029 73 0 0 chr3L 23971814 23971950 -571607 + DMRT1A LINE R1 5043 5178 -5 4 767 572 122 127 27 chr3L 23972087 23972197 -571360 - DNAREP1_DM LINE Penelope 0 594 474 4 767 494 50 0 0 chr3L 23972438 23972498 -571059 - DNAREP1_DM LINE Penelope 0 594 535 4 767 9039 26 9 0 chr3L 23972851 23973890 -569667 + FW_DM LINE Jockey 1 1048 -3644 4 767 29752 10 23 1 chr3L 23973891 23977304 -566253 + FW_DM LINE Jockey 1204 4690 -2 4 767 1440 175 214 19 chr3L 23977301 23977614 -565943 + DMCR1A LINE CR1 3286 3659 -811 4 767 360 267 36 43 chr3L 23977628 23977810 -565747 - IDEFIX_I LTR Gypsy -2960 2668 2510 4 767 30 0 0 0 chr3L 23977962 23977992 -565565 + AT_rich Low_complexity Low_complexity 1 30 0 4 767 1288 156 139 56 chr3L 23978071 23978430 -565127 - DNAREP1_DM LINE Penelope 0 594 206 4 767 610 183 6 36 chr3L 23978766 23978942 -564615 - DNAREP1_DM LINE Penelope -264 330 141 4 767 815 229 63 42 chr3L 23978930 23979217 -564340 - DNAREP1_DM LINE Penelope -301 293 1 4 767 34 0 0 0 chr3L 23979412 23979446 -564111 + AT_rich Low_complexity Low_complexity 1 34 0 4 767 1600 153 135 22 chr3L 23979946 23980383 -563174 - DNAREP1_DM LINE Penelope -1 593 1 4 767 944 167 133 5 chr3L 23980385 23980596 -562961 + DM297_I LTR Gypsy 2735 2972 -3195 4 767 320 158 156 13 chr3L 23980594 23980671 -562886 + DM297_I LTR Gypsy 3196 3283 -2884 4 767 3466 197 183 7 chr3L 23980678 23981599 -561958 + DM297_I LTR Gypsy 3724 4813 -1354 4 767 671 247 86 49 chr3L 23981691 23982200 -561357 + DM297_I LTR Gypsy 5353 5858 -726 4 767 25 51 0 0 chr3L 23982306 23982345 -561212 + AT_rich Low_complexity Low_complexity 1 39 0 4 767 850 129 93 0 chr3L 23982469 23982608 -560949 - DNAREP1_DM LINE Penelope -149 445 294 4 767 472 259 20 0 chr3L 23982851 23982998 -560559 + P_DG DNA P 2739 2888 0 4 767 2140 97 42 95 chr3L 23982867 23983369 -560188 - DNAREP1_DM LINE Penelope 0 594 1 4 767 714 218 79 11 chr3L 23983387 23983577 -559980 - Gypsy12A_LTR LTR Gypsy 0 2280 2078 4 767 256 159 0 0 chr3L 23983811 23983855 -559702 - Gypsy8_I LTR Gypsy -4303 44 1 4 767 243 269 66 42 chr3L 23983920 23984087 -559470 - Gypsy12A_LTR LTR Gypsy -667 1613 1443 4 767 34 24 0 0 chr3L 23984169 23984210 -559347 + AT_rich Low_complexity Low_complexity 1 41 0 4 95 42333 8 2 0 chr3L 23984229 23988912 -554645 + FW_DM LINE Jockey 3 4691 -1 4 768 512 210 156 27 chr3L 23989016 23989241 -554316 - Gypsy12A_LTR LTR Gypsy -1027 1253 1000 4 768 419 252 17 17 chr3L 23989759 23989876 -553681 + Copia2_I LTR Copia 116 232 -3930 4 768 352 338 42 8 chr3L 23989945 23990210 -553347 + Copia2_I LTR Copia 959 1232 -2930 4 768 1750 111 0 0 chr3L 23990230 23990473 -553084 - DMRT1B LINE R1 -91 5092 4850 4 768 4247 123 31 3 chr3L 23990471 23991124 -552433 - DMRT1B LINE R1 -589 4594 3924 4 768 1030 69 189 0 chr3L 23991121 23991280 -552277 - DMRT1B LINE R1 -1756 3427 3239 4 768 4322 127 94 4 chr3L 23991280 23992544 -551013 - DMRT1B LINE R1 -2261 2922 1492 4 768 653 316 52 14 chr3L 23992675 23992964 -550593 + Copia2_I LTR Copia 3164 3463 -699 4 768 1012 304 69 17 chr3L 23992964 23993429 -550128 + Copia2_I LTR Copia 3567 4055 -107 4 768 19904 50 78 5 chr3L 23993772 23998853 -544704 + Baggins1 LINE LOA 1 5453 0 4 768 822 271 112 61 chr3L 23998962 23999437 -544120 - BEL_I LTR Pao -4638 766 268 4 768 743 231 66 5 chr3L 23999779 23999992 -543565 + DNAREP1_DM LINE Penelope 46 271 -323 4 768 523 131 152 3 chr3L 24000002 24000166 -543391 + DNAREP1_DM LINE Penelope 145 332 -262 4 768 481 240 0 24 chr3L 24000211 24000335 -543222 - Invader3_LTR LTR Gypsy -84 214 94 4 768 2381 142 22 40 chr3L 24000402 24000902 -542655 + DMCR1A LINE CR1 3854 4344 -126 4 768 42 48 0 0 chr3L 24000909 24000972 -542585 + AT_rich Low_complexity Low_complexity 1 63 0 4 768 24 53 0 0 chr3L 24001181 24001219 -542338 + AT_rich Low_complexity Low_complexity 1 38 0 4 768 228 234 116 39 chr3L 24004028 24004157 -539400 - Gypsy8_LTR LTR Gypsy -163 141 3 4 768 248 234 0 0 chr3L 24004335 24004399 -539158 - DMCR1A LINE CR1 -3533 937 874 4 768 888 167 162 29 chr3L 24004635 24004875 -538682 - DNAREP1_DM LINE Penelope -23 571 300 4 768 3766 0 0 0 chr3L 24005560 24005988 -537569 - ROO_LTR LTR Pao 0 428 1 4 768 12691 0 10 0 chr3L 24005988 24007492 -536065 - ROO_I LTR Pao 0 8256 6738 4 768 50426 0 2 0 chr3L 24007492 24013415 -530142 - ROO_I LTR Pao -2320 5936 1 4 768 3766 0 0 0 chr3L 24013415 24013843 -529714 - ROO_LTR LTR Pao 0 428 1 4 768 8786 21 9 2 chr3L 24014435 24015532 -528025 + PROTOP_A DNA P 1 1105 0 4 768 350 111 32 0 chr3L 24015884 24015947 -527610 + DNAREP1_DM LINE Penelope 182 246 -348 4 768 38861 3 0 0 chr3L 24015953 24020465 -523092 + FW_DM LINE Jockey 181 4692 0 4 768 431 211 9 0 chr3L 24020461 24020570 -522987 + PROTOP DNA P 1490 1599 -2881 4 768 530 222 82 19 chr3L 24020586 24020793 -522764 + PROTOP_A DNA P 683 902 -203 4 768 189 234 0 0 chr3L 24022733 24022797 -520760 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 4 768 23 54 0 0 chr3L 24022797 24022834 -520723 + AT_rich Low_complexity Low_complexity 1 37 0 4 768 372 253 109 29 chr3L 24022854 24023029 -520528 + DNAREP1_DM LINE Penelope 363 551 -43 4 768 234 206 61 20 chr3L 24023244 24023343 -520214 - DNAREP1_DM LINE Penelope -288 306 204 4 768 23 0 0 0 chr3L 24023823 24023846 -519711 + AT_rich Low_complexity Low_complexity 1 23 0 4 768 1826 124 14 10 chr3L 24024111 24024481 -519076 + DNAREP1_DM LINE Penelope 1 324 -270 4 768 535 160 10 10 chr3L 24024622 24024723 -518834 - PROTOP_A DNA P -1002 103 3 4 768 4635 41 28 0 chr3L 24025015 24025629 -517928 - TC1_DM DNA Tc1 0 1666 1036 4 768 4030 53 7 14 chr3L 24025627 24026391 -517166 - TC1_DM DNA Tc1 -815 851 1 4 768 1482 138 154 0 chr3L 24026405 24026730 -516827 + MINOS DNA Tc1 1262 1636 -139 4 768 241 88 0 0 chr3L 24026771 24026805 -516752 - MINOS DNA Tc1 -1730 45 12 4 768 1305 32 0 0 chr3L 24026826 24026984 -516573 - PROTOP_A DNA P 0 1105 948 4 768 4078 47 42 55 chr3L 24026979 24027649 -515908 - PROTOP_A DNA P -444 661 1 4 768 54 16 0 0 chr3L 24028465 24028526 -515031 + AT_rich Low_complexity Low_complexity 1 61 0 4 768 22 56 0 0 chr3L 24029512 24029548 -514009 + AT_rich Low_complexity Low_complexity 1 36 0 4 768 527 75 25 0 chr3L 24030395 24030475 -513082 + G3_DM LINE Jockey 1 82 -4523 4 768 643 204 305 43 chr3L 24031458 24031804 -511753 + G3_DM LINE Jockey 143 579 -4026 4 768 299 287 0 0 chr3L 24031876 24031977 -511580 - DIVER2_I LTR Pao -1624 2523 2423 4 768 545 359 45 39 chr3L 24032976 24033767 -509790 - DIVER2_I LTR Pao -1758 2389 1594 4 768 225 83 0 0 chr3L 24034242 24034278 -509279 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 4 768 1691 311 35 27 chr3L 24034449 24035195 -508362 + Gypsy6_I LTR Gypsy 919 1670 -5342 4 768 1918 271 32 7 chr3L 24035176 24035764 -507793 + Gypsy6_I LTR Gypsy 2218 2758 -4254 4 768 4063 251 27 25 chr3L 24035777 24036926 -506631 + Gypsy3_I LTR Gypsy 2342 3492 -2685 4 768 277 351 0 0 chr3L 24040658 24040869 -502688 + Invader3_I LTR Gypsy 4059 4193 -695 4 768 4842 261 34 15 chr3L 24041627 24043197 -500360 + Gypsy6_I LTR Gypsy 3278 5318 -1694 4 768 708 259 93 20 chr3L 24043205 24043453 -500104 + Gypsy6_I LTR Gypsy 5722 5987 -1025 4 768 1837 89 11 4 chr3L 24043449 24043720 -499837 + Gypsy6A_LTR LTR Gypsy 148 420 0 4 768 2220 72 137 27 chr3L 24044313 24044700 -498857 + BS3_DM LINE Jockey 1362 1790 0 4 768 11661 141 68 17 chr3L 24044978 24047243 -496314 - DMCR1A LINE CR1 -175 4295 1915 4 768 1593 172 248 27 chr3L 24047879 24048450 -495107 - DMCR1A LINE CR1 -3594 876 167 4 768 198 0 0 0 chr3L 24048450 24048472 -495085 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 768 1593 195 103 27 chr3L 24048472 24048632 -494925 - DMCR1A LINE CR1 -4304 166 6 4 768 322 271 25 0 chr3L 24048640 24048758 -494799 + TV1I LTR Gypsy 3043 3163 -2800 4 768 1332 65 11 5 chr3L 24048772 24048957 -494600 - NINJA_LTR LTR Pao -1 316 131 4 768 1991 35 4 0 chr3L 24048956 24049213 -494344 - NINJA_I LTR Pao -1664 4347 4090 4 768 19810 29 30 19 chr3L 24049205 24051851 -491706 - NINJA_I LTR Pao -3160 2851 177 4 768 356 144 47 35 chr3L 24052292 24052378 -491179 + Transib-N1_DM DNA Transib 21 107 -407 4 768 273 271 49 49 chr3L 24052646 24052809 -490748 + Invader3_I LTR Gypsy 1224 1386 -3502 4 768 252 262 0 12 chr3L 24052925 24053006 -490551 + MDG3_I LTR Gypsy 2263 2342 -2644 4 768 764 299 115 19 chr3L 24053044 24053908 -489649 + MDG3_I LTR Gypsy 2488 3444 -1542 4 768 2110 59 14 0 chr3L 24053883 24054172 -489385 + Invader4_LTR LTR Gypsy 54 346 0 4 768 2004 47 0 0 chr3L 24054172 24054423 -489134 + Invader4_I LTR Gypsy 1 251 -2162 4 768 814 165 124 87 chr3L 24054423 24054721 -488836 + TIRANT_LTR LTR Gypsy 1 309 -108 4 768 357 187 11 42 chr3L 24054875 24054970 -488587 + TIRANT_I LTR Gypsy 1 92 -7600 4 768 2091 249 102 73 chr3L 24055083 24056221 -487336 + TIRANT_I LTR Gypsy 228 1398 -6294 4 768 34786 174 11 1 chr3L 24056386 24062622 -480935 + TIRANT_I LTR Gypsy 1394 7692 0 4 768 909 176 80 90 chr3L 24062622 24062934 -480623 + TIRANT_LTR LTR Gypsy 1 309 -108 4 768 5683 107 21 13 chr3L 24063088 24064039 -479518 + Invader4_I LTR Gypsy 248 1205 -1981 4 768 1863 65 3 21 chr3L 24064029 24064314 -479243 + Invader4_I LTR Gypsy 1021 1300 -1113 4 768 2885 86 96 6 chr3L 24064330 24064823 -478734 + Invader4_I LTR Gypsy 1299 1757 -2342 4 768 1836 31 0 0 chr3L 24064820 24065042 -478515 + PROTOP DNA P 4259 4480 0 4 768 241 88 0 0 chr3L 24065063 24065097 -478460 + MINOS DNA Tc1 12 45 -1730 4 768 1454 145 154 0 chr3L 24065138 24065463 -478094 - MINOS DNA Tc1 -139 1636 1262 4 768 3919 57 8 16 chr3L 24065477 24066274 -477283 + TC1_DM DNA Tc1 1 883 -783 4 768 319 279 65 62 chr3L 24066540 24066815 -476742 + TV1I LTR Gypsy 3618 3893 -2070 4 768 1040 134 6 14 chr3L 24066847 24067055 -476502 - DNAREP1_DM LINE Penelope -260 334 2 4 768 1100 112 176 0 chr3L 24067666 24067905 -475652 + DNAREP1_DM LINE Penelope 1 281 -313 4 768 496 111 0 0 chr3L 24067895 24067967 -475590 + DNAREP1_DM LINE Penelope 400 471 -123 4 768 1435 110 12 16 chr3L 24068002 24068260 -475297 - DNAREP1_DM LINE Penelope -337 257 1 4 768 21 0 0 0 chr3L 24068359 24068380 -475177 + AT_rich Low_complexity Low_complexity 1 21 0 4 768 275 351 0 0 chr3L 24069150 24069264 -474293 + G5_DM LINE Jockey 1012 1125 -3731 4 768 22 0 0 0 chr3L 24069264 24069286 -474271 + AT_rich Low_complexity Low_complexity 1 22 0 4 768 267 290 10 10 chr3L 24071941 24072042 -471515 + G5A_DM LINE Jockey 2281 2381 -460 4 768 360 264 9 9 chr3L 24072133 24072240 -471317 + G5A_DM LINE Jockey 2581 2687 -154 4 768 229 192 61 110 chr3L 24073143 24073225 -470332 + BURDOCK_LTR LTR Gypsy 133 210 -65 4 768 28 0 0 0 chr3L 24073321 24073349 -470208 + AT_rich Low_complexity Low_complexity 1 28 0 4 768 256 269 46 0 chr3L 24073655 24073763 -469794 + Gypsy7_I LTR Gypsy 355 467 -4517 4 768 2360 223 49 69 chr3L 24073756 24074538 -469019 + Gypsy7_I LTR Gypsy 655 1420 -3564 4 768 602 161 380 23 chr3L 24074548 24074764 -468793 + Gypsy7_I LTR Gypsy 1598 1890 -3094 4 768 548 185 74 0 chr3L 24074862 24074970 -468587 + BURDOCK_I LTR Gypsy 2211 2326 -3534 4 768 2705 231 43 3 chr3L 24074972 24075688 -467869 + BURDOCK_I LTR Gypsy 2449 3193 -2667 4 768 3399 206 74 4 chr3L 24075687 24076493 -467064 + Gypsy7_I LTR Gypsy 3053 3915 -1069 4 768 1087 252 53 88 chr3L 24076494 24076950 -466607 + Gypsy7_I LTR Gypsy 4147 4586 -398 4 768 278 358 47 18 chr3L 24076964 24077557 -466000 + Gypsy10_I LTR Gypsy 3812 4841 -437 4 768 429 48 0 60 chr3L 24078082 24078149 -465408 - DMTOM1_LTR LTR Gypsy -214 196 134 4 768 33 0 0 0 chr3L 24078157 24078190 -465367 + AT_rich Low_complexity Low_complexity 1 33 0 4 768 35 63 0 0 chr3L 24078524 24078587 -464970 + AT_rich Low_complexity Low_complexity 1 63 0 4 768 31 68 0 0 chr3L 24078930 24078989 -464568 + AT_rich Low_complexity Low_complexity 1 59 0 4 768 22 35 0 0 chr3L 24080578 24080607 -462950 + AT_rich Low_complexity Low_complexity 1 29 0 4 768 23 0 0 0 chr3L 24081815 24081838 -461719 + AT_rich Low_complexity Low_complexity 1 23 0 4 768 367 326 117 10 chr3L 24082139 24082533 -461024 - DIVER2_I LTR Pao -2016 2131 1696 4 768 410 364 0 0 chr3L 24082830 24083025 -460532 - DIVER2_I LTR Pao -2626 1521 1327 4 768 300 246 0 0 chr3L 24083166 24083235 -460322 - DIVER2_I LTR Pao -3159 988 920 4 768 340 148 398 0 chr3L 24083295 24083403 -460154 - DMCR1A LINE CR1 -2 4468 4318 4 768 376 143 0 0 chr3L 24083404 24083474 -460083 - DMCR1A LINE CR1 -454 4016 3947 4 768 374 141 210 10 chr3L 24083471 24083571 -459986 - DMCR1A LINE CR1 -772 3698 3579 4 768 23 0 0 0 chr3L 24083626 24083649 -459908 + AT_rich Low_complexity Low_complexity 1 23 0 4 768 1729 129 18 77 chr3L 24083705 24084105 -459452 - DNAREP1_DM LINE Penelope -262 332 1 4 768 3437 170 161 13 chr3L 24084135 24085054 -458503 - DMCR1A LINE CR1 -261 4209 3155 4 768 646 121 26 8 chr3L 24085057 24085174 -458383 - DMCR1A LINE CR1 -1455 3015 2897 4 768 685 151 196 27 chr3L 24085175 24085359 -458198 - DMCR1A LINE CR1 -1906 2564 2350 4 768 1398 141 3 56 chr3L 24085372 24085657 -457900 - DMCR1A LINE CR1 -2235 2235 1966 4 768 794 180 185 5 chr3L 24085661 24085856 -457701 - DMCR1A LINE CR1 -2649 1821 1592 4 768 1697 138 41 19 chr3L 24085846 24086392 -457165 - DNAREP1_DM LINE Penelope -171 423 2 4 768 300 169 0 0 chr3L 24086384 24086443 -457114 - DMCR1A LINE CR1 -3095 1375 1317 4 768 1217 47 6 0 chr3L 24086538 24086708 -456849 - TC1_DM DNA Tc1 -1473 193 23 4 768 2269 29 4 0 chr3L 24086714 24086992 -456565 - Gypsy4_LTR LTR Gypsy -8 279 1 4 768 20146 14 8 0 chr3L 24086992 24089413 -454144 - Gypsy4_I LTR Gypsy 0 6288 3850 4 768 10850 10 16 0 chr3L 24089413 24090703 -452854 - Gypsy4_I LTR Gypsy -2557 3731 2421 4 768 38963 5 16 0 chr3L 24091389 24096004 -447553 - FW_DM LINE Jockey 0 4692 2 4 768 696 35 0 0 chr3L 24097445 24097531 -446026 - STALKER4_LTR LTR Gypsy -316 86 1 4 768 19295 17 20 5 chr3L 24099903 24102292 -441265 - Gypsy4_I LTR Gypsy -3863 2425 1 4 768 2343 31 3 0 chr3L 24102292 24102578 -440979 - Gypsy4_LTR LTR Gypsy 0 287 1 4 768 243 0 0 0 chr3L 24102680 24102707 -440850 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 768 995 101 73 112 chr3L 24103266 24103499 -440058 + DNAREP1_DM LINE Penelope 265 488 -106 4 768 1742 132 49 78 chr3L 24103500 24103926 -439631 - DM297_LTR LTR Gypsy 0 414 1 4 768 10801 72 97 10 chr3L 24103927 24107333 -436224 - DM297_I LTR Gypsy -1 6166 2465 4 768 3238 21 0 0 chr3L 24107333 24107718 -435839 - DIVER2_LTR LTR Pao 0 385 1 4 768 22029 29 37 14 chr3L 24107718 24110580 -432977 - DIVER2_I LTR Pao 0 4147 1220 4 768 1532 40 285 3 chr3L 24110560 24110862 -432695 - DIVER2_I LTR Pao -3327 820 434 4 768 1931 63 0 0 chr3L 24111106 24111361 -432196 - DIVER2_I LTR Pao -3708 439 185 4 768 189 121 0 0 chr3L 24111361 24111394 -432163 + (TATG)n Simple_repeat Simple_repeat 3 35 0 4 768 1177 40 0 0 chr3L 24111394 24111545 -432012 - DIVER2_I LTR Pao -3996 151 1 4 768 3051 26 0 38 chr3L 24111546 24111943 -431614 - DIVER2_LTR LTR Pao -1 384 3 4 768 3571 76 60 0 chr3L 24111947 24112498 -431059 - DM297_I LTR Gypsy -3714 2453 1870 4 768 4685 81 69 1 chr3L 24112500 24113341 -430216 - DM297_I LTR Gypsy -4836 1331 434 4 768 296 203 0 0 chr3L 24113595 24113659 -429898 - G5_DM LINE Jockey -1452 3404 3341 4 768 552 346 31 12 chr3L 24113721 24114040 -429517 - G5_DM LINE Jockey -1646 3210 2886 4 768 717 292 159 10 chr3L 24114256 24114647 -428910 - G5_DM LINE Jockey -2220 2636 2188 4 768 227 240 13 39 chr3L 24114992 24115070 -428487 + NOMAD_I LTR Gypsy 4798 4873 -1699 4 768 260 373 5 5 chr3L 24115187 24115373 -428184 + NOMAD_I LTR Gypsy 5107 5292 -1280 4 768 355 253 12 76 chr3L 24115457 24115628 -427929 + NOMAD_I LTR Gypsy 5419 5578 -994 4 768 248 333 78 0 chr3L 24115863 24115965 -427592 + NOMAD_I LTR Gypsy 5928 6037 -535 4 768 289 278 0 0 chr3L 24116470 24116560 -426997 - Invader6_I LTR Gypsy -848 3251 3162 4 768 723 178 0 13 chr3L 24116948 24117107 -426450 + BS2 LINE Jockey 86 242 -4479 4 11 599 225 0 0 chr3L 24117170 24117321 -426236 + G6_DM LINE Jockey 419 569 -1473 4 769 2069 248 0 0 chr3L 24117328 24117836 -425721 + G6_DM LINE Jockey 787 1294 -748 4 769 14509 157 39 18 chr3L 24117839 24120675 -422882 + G_DM LINE Jockey 1385 4281 -65 4 769 6329 122 61 4 chr3L 24120857 24121907 -421650 + GTWIN_I LTR Gypsy 3811 4920 -1501 4 769 5451 185 21 42 chr3L 24121909 24123068 -420489 + GTWIN_I LTR Gypsy 5284 6417 -4 4 769 1830 154 32 27 chr3L 24123170 24123544 -420013 + GTWIN_LTR LTR Gypsy 60 435 -60 4 769 25 0 0 0 chr3L 24124234 24124259 -419298 + AT_rich Low_complexity Low_complexity 1 25 0 4 769 289 257 0 0 chr3L 24124953 24125023 -418534 - DIVER2_I LTR Pao -3158 989 920 4 769 308 109 0 18 chr3L 24125082 24125138 -418419 - DMCR1A LINE CR1 -1 4469 4415 4 769 376 143 0 0 chr3L 24125194 24125264 -418293 - DMCR1A LINE CR1 -454 4016 3947 4 769 373 144 200 9 chr3L 24125261 24125366 -418191 - DMCR1A LINE CR1 -772 3698 3574 4 769 35 0 0 0 chr3L 24125375 24125410 -418147 + AT_rich Low_complexity Low_complexity 1 35 0 4 769 5033 13 0 0 chr3L 24125410 24126006 -417551 - QUASIMODO_LTR LTR Gypsy 0 658 63 4 769 44647 2 0 0 chr3L 24126002 24131157 -412400 - DMRT1A LINE R1 -28 5155 1 4 769 523 14 0 28 chr3L 24131167 24131238 -412319 - QUASIMODO_LTR LTR Gypsy -589 69 1 4 769 49076 11 6 1 chr3L 24131238 24137265 -406292 - QUASIMODO_I LTR Gypsy 0 6060 1 4 769 4798 28 22 8 chr3L 24137265 24137886 -405671 - QUASIMODO_LTR LTR Gypsy 0 658 29 4 769 343 25 99 0 chr3L 24137888 24137969 -405588 + (TA)n Simple_repeat Simple_repeat 2 90 0 4 769 23 0 0 0 chr3L 24137990 24138013 -405544 + AT_rich Low_complexity Low_complexity 1 23 0 4 769 1742 125 18 77 chr3L 24138069 24138469 -405088 - DNAREP1_DM LINE Penelope -262 332 1 4 769 3437 170 161 13 chr3L 24138499 24139418 -404139 - DMCR1A LINE CR1 -261 4209 3155 4 769 646 121 26 8 chr3L 24139421 24139538 -404019 - DMCR1A LINE CR1 -1455 3015 2897 4 769 595 148 196 27 chr3L 24139539 24139723 -403834 - DMCR1A LINE CR1 -1906 2564 2350 4 769 1398 141 3 56 chr3L 24139736 24140021 -403536 - DMCR1A LINE CR1 -2235 2235 1966 4 769 1255 152 140 0 chr3L 24140025 24140275 -403282 - DMCR1A LINE CR1 -2649 1821 1537 4 769 10295 37 42 5 chr3L 24140362 24141746 -401811 + M4DM DNA Transib 1 1435 0 4 769 415 248 8 23 chr3L 24142796 24142924 -400633 - DIVER2_I LTR Pao -2325 1822 1697 4 769 3318 171 173 7 chr3L 24143724 24144819 -398738 - MAX_I LTR Pao -2671 5243 3968 4 769 481 108 0 21 chr3L 24144816 24144911 -398646 - DNAREP1_DM LINE Penelope -320 274 182 4 769 28 0 0 0 chr3L 24146436 24146464 -397093 + AT_rich Low_complexity Low_complexity 1 28 0 4 769 542 229 44 15 chr3L 24146548 24146752 -396805 - HOBO DNA hAT -611 2405 2196 4 769 2789 69 105 6 chr3L 24146872 24147549 -396008 + BS3_DM LINE Jockey 215 958 -832 4 769 692 67 0 0 chr3L 24147543 24147633 -395924 + BS3_DM LINE Jockey 1284 1373 -417 4 769 2548 74 11 0 chr3L 24147644 24147997 -395560 + BS3_DM LINE Jockey 1430 1786 -4 4 769 337 252 191 5 chr3L 24148521 24148720 -394837 + FW_DM LINE Jockey 1911 2146 -2546 4 769 1128 244 160 13 chr3L 24148739 24149133 -394424 + FW_DM LINE Jockey 3555 4006 -686 4 769 5829 30 102 0 chr3L 24149175 24149940 -393617 - Baggins1 LINE LOA 0 5453 4611 4 769 1429 116 50 39 chr3L 24152352 24152631 -390926 + DNAREP1_DM LINE Penelope 189 470 -124 4 769 273 164 0 0 chr3L 24153074 24153129 -390428 - DNAREP1_DM LINE Penelope -184 410 356 4 769 1365 116 264 29 chr3L 24153287 24153734 -389823 - DNAREP1_DM LINE Penelope 0 594 1 4 769 3163 16 0 0 chr3L 24154831 24155207 -388350 + PROTOP_A DNA P 730 1105 0 4 769 257 119 0 0 chr3L 24156016 24156058 -387499 - DNAREP1_DM LINE Penelope -543 51 10 4 769 573 41 0 0 chr3L 24156064 24156137 -387420 - DNAREP1_DM LINE Penelope 0 594 522 4 769 465 174 95 51 chr3L 24156146 24156317 -387240 - DNAREP1_DM LINE Penelope -262 332 117 4 769 2768 64 215 5 chr3L 24156770 24157348 -386209 - R1-2_DM LINE R1 -194 3022 2323 4 769 4036 58 54 4 chr3L 24157346 24157904 -385653 - R1-2_DM LINE R1 -1165 2051 1466 4 769 1185 94 139 0 chr3L 24158216 24158417 -385140 - DNAREP1_DM LINE Penelope 0 594 366 4 769 383 214 48 152 chr3L 24158447 24158678 -384879 - DNAREP1_DM LINE Penelope -351 243 37 4 769 458 158 0 0 chr3L 24158841 24158923 -384634 - DNAREP1_DM LINE Penelope -500 94 13 4 769 21 36 0 0 chr3L 24160104 24160132 -383425 + AT_rich Low_complexity Low_complexity 1 28 0 4 769 383 192 0 0 chr3L 24160144 24160222 -383335 - DNAREP1_DM LINE Penelope 0 594 517 4 769 375 129 147 0 chr3L 24160255 24160399 -383158 - DNAREP1_DM LINE Penelope -262 332 157 4 769 664 192 176 48 chr3L 24160437 24160807 -382750 - DNAREP1_DM LINE Penelope -288 306 1 4 769 3953 6 4 0 chr3L 24161943 24162413 -381144 + ZAM_LTR LTR Gypsy 1 472 0 4 769 513 0 0 0 chr3L 24162413 24162472 -381085 + ZAM_I LTR Gypsy 1 59 -7431 4 769 46326 3 0 1 chr3L 24162472 24168743 -374814 + ZAM_I LTR Gypsy 1223 7490 0 4 769 4133 6 4 0 chr3L 24168743 24169213 -374344 + ZAM_LTR LTR Gypsy 1 472 0 4 769 228 247 25 25 chr3L 24169416 24169495 -374062 - ZAM_I LTR Gypsy -3806 3684 3606 4 769 2444 59 59 0 chr3L 24169536 24169857 -373700 + DMCR1A LINE CR1 3572 3911 -559 4 769 975 142 22 24 chr3L 24170062 24170273 -373284 - DNAREP1_DM LINE Penelope -262 332 86 4 769 24599 38 60 3 chr3L 24170271 24173796 -369761 - DOC3_DM LINE Jockey 0 4740 1017 4 769 3938 51 6 8 chr3L 24173794 24174312 -369245 - DOC3_DM LINE Jockey -3829 911 395 4 769 9086 35 71 26 chr3L 24174312 24175543 -368014 + DOC2_DM LINE Jockey 2 1287 -3506 4 769 13782 14 20 0 chr3L 24175530 24177130 -366427 + DOC2_DM LINE Jockey 1667 3298 -1495 4 769 1462 11 32 16 chr3L 24177140 24177328 -366229 + DOC2_DM LINE Jockey 4603 4793 0 4 769 853 10 0 0 chr3L 24177328 24177424 -366133 - DOC3_DM LINE Jockey -4335 405 310 4 769 2601 30 3 21 chr3L 24177426 24177762 -365795 + DOC3_DM LINE Jockey 4411 4740 0 4 769 2469 147 52 22 chr3L 24177739 24178312 -365245 + DNAREP1_DM LINE Penelope 86 594 0 4 769 26 30 0 0 chr3L 24178367 24178400 -365157 + AT_rich Low_complexity Low_complexity 1 33 0 4 769 877 90 0 0 chr3L 24179564 24179697 -363860 + G4_DM LINE Jockey 3724 3856 0 4 769 756 0 0 0 chr3L 24180420 24180504 -363053 + (TTA)n Simple_repeat Simple_repeat 1 84 0 4 769 3607 99 38 2 chr3L 24180593 24181121 -362436 - DMCR1A LINE CR1 -426 4044 3498 4 769 260 114 0 0 chr3L 24181111 24181146 -362411 - DMCR1A LINE CR1 -1147 3323 3289 4 769 19558 62 58 10 chr3L 24181149 24183817 -359740 - Baggins1 LINE LOA -2565 2888 3 4 769 1312 128 110 12 chr3L 24184494 24184739 -358818 - DNAREP1_DM LINE Penelope -20 574 306 4 769 240 122 0 0 chr3L 24184803 24184844 -358713 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 4 769 6145 56 65 7 chr3L 24184958 24185792 -357765 - DMCR1A LINE CR1 -91 4379 3498 4 769 9705 66 41 14 chr3L 24185790 24187117 -356440 - DMCR1A LINE CR1 -1470 3000 1638 4 769 180 0 0 0 chr3L 24187119 24187139 -356418 + (CTATA)n Simple_repeat Simple_repeat 1 20 0 4 769 4117 64 124 10 chr3L 24187142 24187724 -355833 - DMCR1A LINE CR1 -3056 1414 767 4 769 2728 80 48 0 chr3L 24187743 24188116 -355441 + G5A_DM LINE Jockey 781 1171 -1670 4 769 1352 69 6 0 chr3L 24188114 24188288 -355269 + G5A_DM LINE Jockey 1341 1515 -1326 4 769 5720 64 96 14 chr3L 24188288 24189204 -354353 + G5A_DM LINE Jockey 1624 2614 -227 4 769 274 100 0 0 chr3L 24189200 24189240 -354317 + G5A_DM LINE Jockey 2794 2833 -8 4 769 480 292 26 37 chr3L 24189490 24189870 -353687 - TV1I LTR Gypsy -1051 4912 4537 4 769 303 249 43 43 chr3L 24189881 24190045 -353512 - TV1I LTR Gypsy -1509 4454 4291 4 769 792 40 10 0 chr3L 24190045 24190146 -353411 - DNAREP1_DM LINE Penelope 0 594 493 4 769 2313 7 0 78 chr3L 24190147 24190454 -353103 + DM176_LTR LTR Gypsy 1 283 -224 4 769 2104 20 16 0 chr3L 24190455 24190708 -352849 + DM176_LTR LTR Gypsy 251 507 0 4 769 216 0 0 0 chr3L 24190710 24190734 -352823 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 769 5942 0 0 0 chr3L 24190734 24191392 -352165 - QUASIMODO_LTR LTR Gypsy 0 658 1 4 769 32767 7 0 0 chr3L 24191392 24195241 -348316 - QUASIMODO_I LTR Gypsy 0 6060 2213 4 769 6354 0 6 1 chr3L 24195231 24195936 -347621 - QUASIMODO_I LTR Gypsy -5352 708 1 4 769 5942 0 0 0 chr3L 24195936 24196594 -346963 - QUASIMODO_LTR LTR Gypsy 0 658 1 4 769 521 112 6 30 chr3L 24196594 24196691 -346866 - DNAREP1_DM LINE Penelope -91 503 424 4 769 35 71 0 0 chr3L 24197453 24197523 -346034 + AT_rich Low_complexity Low_complexity 1 70 0 4 769 5972 53 14 5 chr3L 24197614 24198373 -345184 - IVK_DM LINE I -2831 2571 1806 4 769 702 359 27 30 chr3L 24198550 24199182 -344375 - BLASTOPIA_I LTR Gypsy -1 4480 3851 4 769 392 294 0 0 chr3L 24199246 24199365 -344192 - BLASTOPIA_I LTR Gypsy -749 3732 3614 4 769 497 320 101 24 chr3L 24199403 24199739 -343818 - BLASTOPIA_I LTR Gypsy -1319 3162 2801 4 769 934 97 93 5 chr3L 24199798 24199953 -343604 - DNAREP1_DM LINE Penelope -22 572 424 4 769 33 0 0 0 chr3L 24200222 24200255 -343302 + AT_rich Low_complexity Low_complexity 1 33 0 4 769 633 302 34 49 chr3L 24200257 24201254 -342303 - TV1I LTR Gypsy -2104 3859 2629 4 769 51 51 0 0 chr3L 24202428 24202507 -341050 + AT_rich Low_complexity Low_complexity 1 79 0 4 769 403 241 9 0 chr3L 24202530 24202638 -340919 - IDEFIX_I LTR Gypsy -3245 2383 2275 4 769 37 52 0 0 chr3L 24202788 24202846 -340711 + AT_rich Low_complexity Low_complexity 1 58 0 4 769 33 25 0 0 chr3L 24203079 24203119 -340438 + AT_rich Low_complexity Low_complexity 1 40 0 4 769 204 40 0 0 chr3L 24203460 24203485 -340072 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 769 21 0 0 0 chr3L 24203743 24203764 -339793 + AT_rich Low_complexity Low_complexity 1 21 0 4 769 314 242 79 55 chr3L 24204551 24204678 -338879 + DIVER2_I LTR Pao 479 608 -3539 4 769 741 347 106 60 chr3L 24204766 24205683 -337874 + DIVER2_I LTR Pao 855 1813 -2334 4 769 232 276 0 0 chr3L 24205905 24205963 -337594 + DIVER2_I LTR Pao 4088 4145 -2 4 769 970 162 141 21 chr3L 24205977 24206211 -337346 + QUASIMODO_LTR LTR Gypsy 328 589 -69 4 769 22 35 0 0 chr3L 24206223 24206252 -337305 + AT_rich Low_complexity Low_complexity 1 29 0 4 769 230 156 47 0 chr3L 24206258 24206322 -337235 + (TAAA)n Simple_repeat Simple_repeat 3 69 0 4 769 222 24 0 87 chr3L 24206341 24206387 -337170 + (TTA)n Simple_repeat Simple_repeat 2 43 0 4 769 309 228 12 11 chr3L 24206773 24206872 -336685 - TV1I LTR Gypsy -839 5221 5044 4 769 23034 20 24 3 chr3L 24206925 24209904 -333653 - Invader2_I LTR Gypsy -1487 3105 1 4 769 2373 11 0 0 chr3L 24209904 24210170 -333387 - Invader2_LTR LTR Gypsy 0 266 1 4 769 446 281 145 28 chr3L 24210235 24210785 -332772 - TV1I LTR Gypsy -1056 4907 4291 4 769 792 40 10 0 chr3L 24210785 24210886 -332671 - DNAREP1_DM LINE Penelope 0 594 493 4 769 2282 11 0 78 chr3L 24210887 24211194 -332363 + DM176_LTR LTR Gypsy 1 283 -224 4 769 2104 20 16 0 chr3L 24211195 24211448 -332109 + DM176_LTR LTR Gypsy 251 507 0 4 769 54880 7 6 1 chr3L 24211448 24211938 -331619 + DM176_I LTR Gypsy 1 518 -5902 4 769 181 30 29 57 chr3L 24211938 24211973 -331584 + (TAA)n Simple_repeat Simple_repeat 3 36 0 4 769 54880 7 6 1 chr3L 24211973 24217873 -325684 + DM176_I LTR Gypsy 519 6420 0 4 769 2277 14 0 78 chr3L 24217873 24218180 -325377 + DM176_LTR LTR Gypsy 1 283 -224 4 769 2104 20 16 0 chr3L 24218181 24218434 -325123 + DM176_LTR LTR Gypsy 251 507 0 4 769 270 0 0 0 chr3L 24218436 24218466 -325091 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 769 495 98 7 12 chr3L 24218472 24218552 -325005 - DNAREP1_DM LINE Penelope -106 488 424 4 769 23 54 0 0 chr3L 24219333 24219370 -324187 + AT_rich Low_complexity Low_complexity 1 37 0 4 769 352 292 39 39 chr3L 24219669 24219822 -323735 + Gypsy4_I LTR Gypsy 847 999 -5289 4 769 29 60 0 0 chr3L 24220115 24220165 -323392 + AT_rich Low_complexity Low_complexity 1 50 0 4 769 22 35 0 0 chr3L 24220445 24220474 -323083 + AT_rich Low_complexity Low_complexity 1 29 0 4 769 496 321 25 24 chr3L 24221044 24221471 -322086 + Gypsy_DS LTR Gypsy 3010 3591 -2938 4 769 293 226 37 98 chr3L 24221506 24221678 -321879 + BURDOCK_LTR LTR Gypsy 29 211 -64 4 769 948 115 22 87 chr3L 24221760 24221989 -321568 + TLD2 Unknown Unknown 5 218 0 4 769 454 306 34 77 chr3L 24221983 24222538 -321019 + Gypsy4_I LTR Gypsy 2933 3310 -2978 4 769 31 68 0 0 chr3L 24223422 24223481 -320076 + AT_rich Low_complexity Low_complexity 1 59 0 4 769 35 63 0 0 chr3L 24223744 24223807 -319750 + AT_rich Low_complexity Low_complexity 1 63 0 4 769 31 44 0 0 chr3L 24224412 24224457 -319100 + AT_rich Low_complexity Low_complexity 1 45 0 4 769 782 88 80 0 chr3L 24224474 24224599 -318958 + PROTOP_A DNA P 183 317 -788 4 769 579 115 0 124 chr3L 24224720 24224849 -318708 + PROTOP_A DNA P 847 959 -146 4 769 5905 98 69 5 chr3L 24224854 24225897 -317660 + G5A_DM LINE Jockey 2034 2841 0 4 769 1626 67 54 0 chr3L 24225920 24226245 -317312 - G4_DM LINE Jockey 0 3856 3468 4 769 435 85 0 0 chr3L 24226257 24226316 -317241 + PROTOP_A DNA P 948 1007 -98 4 769 1170 124 56 78 chr3L 24226462 24226768 -316789 + Gypsy12A_LTR LTR Gypsy 980 1278 -1002 4 769 4035 276 65 16 chr3L 24227421 24229311 -314246 - QUASIMODO_I LTR Gypsy -165 5895 3914 4 769 5169 250 63 35 chr3L 24229303 24231188 -312369 - TV1I LTR Gypsy -2247 3716 1778 4 769 775 300 63 26 chr3L 24231400 24231907 -311650 - QUASIMODO_I LTR Gypsy -4331 1729 1204 4 769 395 332 78 11 chr3L 24232041 24232309 -311248 - QUASIMODO_I LTR Gypsy -5338 722 437 4 769 4008 69 44 5 chr3L 24232481 24233052 -310505 + IDEFIX_LTR LTR Gypsy 2 594 0 4 769 637 138 34 25 chr3L 24233063 24233182 -310375 + Gypsy12A_LTR LTR Gypsy 1118 1237 -1043 4 769 2033 166 151 67 chr3L 24233266 24233910 -309647 + Gypsy12A_LTR LTR Gypsy 1580 2277 -3 4 769 22 0 0 0 chr3L 24234014 24234036 -309521 + AT_rich Low_complexity Low_complexity 1 22 0 4 769 33 56 0 0 chr3L 24234180 24234234 -309323 + AT_rich Low_complexity Low_complexity 1 54 0 4 769 821 168 73 15 chr3L 24234811 24235008 -308549 + DNAREP1_DM LINE Penelope 321 485 -109 4 769 1041 66 0 0 chr3L 24235481 24235616 -307941 + DNAREP1_DM LINE Penelope 1 135 -459 4 769 2389 0 0 0 chr3L 24235616 24235892 -307665 - Copia_LTR LTR Copia 0 276 1 4 769 40836 1 0 0 chr3L 24235892 24240485 -303072 - Copia_I LTR Copia 0 4593 1 4 769 2389 0 0 0 chr3L 24240485 24240761 -302796 - Copia_LTR LTR Copia 0 276 1 4 769 405 185 65 0 chr3L 24240762 24240870 -302687 + DNAREP1_DM LINE Penelope 132 246 -348 4 769 1473 66 73 36 chr3L 24241629 24241848 -301709 + DNAREP1_DM LINE Penelope 365 591 -3 4 769 234 303 44 22 chr3L 24242213 24242304 -301253 + Gypsy2_I LTR Gypsy 3843 3935 -2200 4 769 238 310 0 0 chr3L 24242299 24242357 -301200 + Gypsy10_I LTR Gypsy 3553 3610 -1668 4 769 3462 168 46 61 chr3L 24242371 24243193 -300364 - Gypsy12_LTR LTR Gypsy 0 2336 1527 4 769 866 194 82 41 chr3L 24243189 24243589 -299968 - Gypsy12_LTR LTR Gypsy -962 1374 899 4 769 693 243 48 11 chr3L 24243600 24243787 -299770 - Gypsy12_LTR LTR Gypsy -1568 768 575 4 769 886 192 18 72 chr3L 24243813 24244054 -299503 - Gypsy12_LTR LTR Gypsy -1842 494 274 4 769 593 86 0 0 chr3L 24244085 24244166 -299391 - Gypsy12_LTR LTR Gypsy -2151 185 105 4 769 13065 50 4 1 chr3L 24244163 24245808 -297749 + FB4_DM DNA Tc1 1110 2759 -1330 4 769 550 132 9 54 chr3L 24245803 24245915 -297642 - Gypsy12_LTR LTR Gypsy -2229 107 1 4 769 268 197 0 0 chr3L 24245915 24245980 -297577 + Gypsy10_I LTR Gypsy 3622 3686 -1592 4 769 318 228 136 0 chr3L 24246146 24246261 -297296 + Gypsy4_I LTR Gypsy 4627 4741 -1547 4 769 733 200 105 6 chr3L 24247148 24247329 -296228 - LINEJ1_DM LINE Jockey -1325 3695 3497 4 769 301 244 22 11 chr3L 24247341 24247432 -296125 - LINEJ1_DM LINE Jockey -1574 3446 3355 4 769 1062 226 16 4 chr3L 24247432 24247676 -295881 - LINEJ1_DM LINE Jockey -1986 3034 2788 4 96 2382 221 193 4 chr3L 24247703 24248765 -294792 - LINEJ1_DM LINE Jockey -2861 2159 898 4 770 10869 101 113 8 chr3L 24248772 24251359 -292198 + I_DM LINE I 1477 4335 -1896 4 770 22 0 0 0 chr3L 24251834 24251856 -291701 + AT_rich Low_complexity Low_complexity 1 22 0 4 770 13449 46 61 0 chr3L 24252255 24253956 -289601 - Baggins1 LINE LOA 0 5453 3649 4 770 3823 37 0 0 chr3L 24253956 24254418 -289139 - PROTOP_A DNA P 0 1105 644 4 770 3858 23 95 0 chr3L 24254408 24254890 -288667 - PROTOP_A DNA P -577 528 1 4 770 9760 49 72 7 chr3L 24254890 24256352 -287205 - Baggins1 LINE LOA -1798 3655 2098 4 770 9547 42 28 2 chr3L 24256333 24257516 -286041 - Baggins1 LINE LOA -3717 1736 523 4 770 1684 40 84 9 chr3L 24257496 24257722 -285835 - Baggins1 LINE LOA -5209 244 2 4 770 3040 46 30 53 chr3L 24258135 24258570 -284987 + Gypsy11_LTR LTR Gypsy 28 452 0 4 770 9349 111 86 76 chr3L 24258570 24260613 -282944 + Gypsy11_I LTR Gypsy 1 2063 -1461 4 770 11613 220 28 28 chr3L 24260621 24263713 -279844 + DM412 LTR Gypsy 2761 5854 -1043 4 770 2191 156 53 20 chr3L 24263713 24264163 -279394 + DM412B_LTR LTR Gypsy 1 465 -106 4 770 4935 75 3 8 chr3L 24264178 24264906 -278651 + Gypsy11_I LTR Gypsy 2661 3384 -140 4 770 4691 4 0 0 chr3L 24265247 24265765 -277792 + NOMAD_LTR LTR Gypsy 1 518 0 4 770 59946 2 1 1 chr3L 24265765 24272339 -271218 + NOMAD_I LTR Gypsy 1 6572 0 4 770 4691 4 0 0 chr3L 24272339 24272857 -270700 + NOMAD_LTR LTR Gypsy 1 518 0 4 770 2806 50 56 76 chr3L 24272857 24273286 -270271 + Gypsy11_LTR LTR Gypsy 33 452 0 4 770 1548 90 22 0 chr3L 24273388 24273611 -269946 - Transib5 DNA Transib 0 3001 2774 4 770 8856 14 30 10 chr3L 24273611 24274694 -268863 + PROTOP_A DNA P 1 1105 0 4 770 1936 15 142 4 chr3L 24274823 24275084 -268473 - TRANSIB1 DNA Transib -2717 297 1 4 770 597 175 154 21 chr3L 24275397 24275637 -267920 - DNAREP1_DM LINE Penelope -322 272 1 4 770 2282 151 62 15 chr3L 24276022 24276492 -267065 - DMCR1A LINE CR1 0 4470 3979 4 770 237 335 24 89 chr3L 24276539 24276785 -266772 - ACCORD2_I LTR Gypsy -6457 755 526 4 770 1706 83 12 106 chr3L 24276864 24277186 -266371 - Invader3_LTR LTR Gypsy -6 292 1 4 770 16782 14 6 3 chr3L 24277186 24279232 -264325 - Invader3_I LTR Gypsy 0 4888 2836 4 770 8880 27 0 1 chr3L 24279241 24280347 -263210 - PROTOP_A DNA P 0 1105 1 4 770 1230 13 0 0 chr3L 24280356 24280506 -263051 - Invader3_I LTR Gypsy -2064 2824 2675 4 770 8893 28 4 0 chr3L 24280507 24281596 -261961 - Invader3_I LTR Gypsy -3795 1093 1 4 770 1323 91 75 99 chr3L 24281596 24281890 -261667 - Invader3_LTR LTR Gypsy 0 298 12 4 770 375 131 29 14 chr3L 24281914 24281984 -261573 - DMCR1A LINE CR1 -486 3984 3914 4 770 265 164 0 0 chr3L 24282541 24282596 -260961 - Gypsy8_I LTR Gypsy -4289 58 4 4 770 846 160 4 215 chr3L 24282596 24282868 -260689 - Gypsy8_LTR LTR Gypsy 0 304 1 4 770 408 163 52 42 chr3L 24282870 24282966 -260591 - DMCR1A LINE CR1 -552 3918 3822 4 770 30 77 0 0 chr3L 24284080 24284145 -259412 + AT_rich Low_complexity Low_complexity 1 65 0 4 770 29 0 0 0 chr3L 24284219 24284248 -259309 + AT_rich Low_complexity Low_complexity 1 29 0 4 770 410 212 62 62 chr3L 24284791 24284967 -258590 - Gypsy8_LTR LTR Gypsy -8 296 121 4 770 7410 15 102 11 chr3L 24285134 24286147 -257410 + PROTOP_A DNA P 1 1105 0 4 770 23 54 0 0 chr3L 24286339 24286376 -257181 + AT_rich Low_complexity Low_complexity 1 37 0 4 770 24 77 0 0 chr3L 24287003 24287055 -256502 + AT_rich Low_complexity Low_complexity 1 52 0 4 770 835 183 306 14 chr3L 24287322 24287703 -255854 + DMCR1A LINE CR1 951 1441 -3029 4 770 3174 131 74 31 chr3L 24287714 24288319 -255238 + DMCR1A LINE CR1 2684 3314 -1156 4 770 458 95 40 0 chr3L 24288323 24288397 -255160 + Baggins1 LINE LOA 4688 4764 -689 4 770 750 78 0 0 chr3L 24288389 24288491 -255066 + Baggins1 LINE LOA 4968 5069 -384 4 770 458 32 48 0 chr3L 24288511 24288573 -254984 + Baggins1 LINE LOA 5387 5451 -2 4 770 4697 158 34 0 chr3L 24288583 24289427 -254130 + DMCR1A LINE CR1 3303 4175 -295 4 770 763 98 168 50 chr3L 24289436 24289597 -253960 - DNAREP1_DM LINE Penelope -62 532 353 4 770 2127 111 107 13 chr3L 24289594 24289988 -253569 + DNAREP1_DM LINE Penelope 164 594 0 4 770 25 31 0 0 chr3L 24291420 24291452 -252105 + AT_rich Low_complexity Low_complexity 1 32 0 4 770 183 72 23 45 chr3L 24291534 24291578 -251979 + (TATAA)n Simple_repeat Simple_repeat 4 46 0 4 770 22 56 0 0 chr3L 24291629 24291665 -251892 + AT_rich Low_complexity Low_complexity 1 36 0 4 770 22 35 0 0 chr3L 24291798 24291827 -251730 + AT_rich Low_complexity Low_complexity 1 29 0 4 770 428 176 0 47 chr3L 24292489 24292596 -250961 - DNAREP1_DM LINE Penelope 0 594 493 4 770 376 152 15 0 chr3L 24292803 24292869 -250688 - DNAREP1_DM LINE Penelope -106 488 422 4 770 493 231 152 78 chr3L 24292875 24293157 -250400 + Gypsy8_LTR LTR Gypsy 2 304 0 4 770 555 175 152 7 chr3L 24293720 24293858 -249699 - DNAREP1_DM LINE Penelope -166 428 271 4 770 1400 128 34 31 chr3L 24294930 24295298 -248259 + DNAREP1_DM LINE Penelope 1 485 -109 4 770 29 19 0 55 chr3L 24295298 24295353 -248204 + AT_rich Low_complexity Low_complexity 1 52 0 4 770 7592 40 66 22 chr3L 24295394 24296481 -247076 + LOOPER1_DM DNA PiggyBac 1 1135 -746 4 770 2288 47 23 17 chr3L 24296480 24296826 -246731 + LOOPER1_DM DNA PiggyBac 1532 1879 -2 4 770 189 0 0 0 chr3L 24297288 24297309 -246248 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 770 1126 246 95 30 chr3L 24297357 24297789 -245768 - Copia_I LTR Copia -250 4343 3884 4 770 19768 25 5 2 chr3L 24297791 24300218 -243339 + BS LINE Jockey 5 2437 -2689 4 770 2689 34 0 0 chr3L 24300221 24300547 -243010 + BS LINE Jockey 3273 3598 -1528 4 770 1200 33 0 0 chr3L 24300537 24300689 -242868 + BS LINE Jockey 4972 5123 -3 4 770 1575 293 13 22 chr3L 24300724 24301505 -242052 - Copia_I LTR Copia -757 3836 3063 4 770 1982 284 15 15 chr3L 24302012 24302892 -240665 - Copia_I LTR Copia -2314 2279 1400 4 770 10040 65 41 0 chr3L 24303180 24304593 -238964 + DMRT1C LINE R1 3925 5395 -48 4 770 770 208 0 11 chr3L 24304640 24305000 -238557 + (CATATA)n Simple_repeat Simple_repeat 1 356 0 4 770 258 149 60 0 chr3L 24304994 24305061 -238496 + (CATA)n Simple_repeat Simple_repeat 3 73 0 4 770 964 148 0 0 chr3L 24306091 24306253 -237304 + Gypsy2_LTR LTR Gypsy 10 171 -182 4 770 370 43 0 0 chr3L 24306415 24306461 -237096 + Gypsy2_I LTR Gypsy 11 56 -6079 4 770 9866 157 79 50 chr3L 24306490 24308828 -234729 + Gypsy2_I LTR Gypsy 1085 3490 -2645 4 770 2043 168 16 62 chr3L 24308841 24309278 -234279 + Gypsy2_I LTR Gypsy 4678 5094 -1041 4 770 297 257 0 0 chr3L 24309564 24309638 -233919 - Gypsy12_I LTR Gypsy -557 4989 4916 4 770 747 47 57 0 chr3L 24309681 24309787 -233770 + Baggins1 LINE LOA 3 114 -5339 4 770 14500 44 18 1 chr3L 24309783 24311653 -231904 + Baggins1 LINE LOA 217 2118 -3335 4 770 15113 113 65 48 chr3L 24311652 24314609 -228948 + Baggins1 LINE LOA 2446 5452 -1 4 770 22 80 0 0 chr3L 24315189 24315239 -228318 + AT_rich Low_complexity Low_complexity 1 50 0 4 770 473 269 7 7 chr3L 24315354 24315500 -228057 + Gypsy12_I LTR Gypsy 3289 3434 -2112 4 770 506 348 30 32 chr3L 24315912 24316419 -227138 + Gypsy12_I LTR Gypsy 5000 5505 -41 4 770 25 31 0 0 chr3L 24317548 24317580 -225977 + AT_rich Low_complexity Low_complexity 1 32 0 4 770 7908 117 68 12 chr3L 24318558 24320201 -223356 - S_DM DNA Tc1 0 1736 1 4 770 1227 152 116 40 chr3L 24320279 24320608 -222949 - DNAREP1_DM LINE Penelope -152 442 89 4 770 1272 36 42 0 chr3L 24320998 24321165 -222392 + PROTOP_A DNA P 1 174 -931 4 770 2960 75 96 9 chr3L 24321165 24321625 -221932 - PROTOP DNA P 0 4480 3981 4 770 2033 69 0 4 chr3L 24321625 24321902 -221655 + PROTOP_A DNA P 823 1104 -1 4 770 494 161 33 33 chr3L 24323596 24323718 -219839 - DMRT1A LINE R1 -27 5156 5035 4 770 265 28 0 0 chr3L 24323730 24323766 -219791 - DMCR1A LINE CR1 -465 4005 3970 4 770 230 75 0 0 chr3L 24323782 24323822 -219735 + DMCR1A LINE CR1 3962 4001 -469 4 770 4384 60 67 10 chr3L 24323830 24324455 -219102 - DMCR1A LINE CR1 -512 3958 3298 4 770 10368 43 22 0 chr3L 24324450 24325787 -217770 - DMCR1A LINE CR1 -1290 3180 1815 4 770 3053 45 10 0 chr3L 24325791 24326193 -217364 - PROTOP_A DNA P -92 1013 608 4 770 2091 38 8 0 chr3L 24326193 24326457 -217100 + Invader2_LTR LTR Gypsy 1 266 0 4 770 513 73 42 0 chr3L 24326457 24326553 -217004 - PROTOP DNA P -3733 747 648 4 770 4430 35 5 7 chr3L 24326550 24327123 -216434 - PROTOP_A DNA P -533 572 1 4 770 6099 45 59 20 chr3L 24327123 24328707 -214850 - DMCR1A LINE CR1 -2825 1645 1 4 770 1029 336 18 14 chr3L 24329034 24329701 -213856 - BLASTOPIA_I LTR Gypsy -431 4050 3381 4 770 7237 47 53 1 chr3L 24329705 24330667 -212890 - Baggins1 LINE LOA 0 5453 4442 4 770 11184 48 6 1 chr3L 24330660 24332106 -211451 - Baggins1 LINE LOA -2715 2738 1286 4 770 2374 33 7 0 chr3L 24332093 24332398 -211159 - Baggins1 LINE LOA -4512 941 635 4 770 1876 41 146 0 chr3L 24332403 24332670 -210887 - Baggins1 LINE LOA -5146 307 2 4 770 1059 312 52 19 chr3L 24332856 24333533 -210024 - BLASTOPIA_I LTR Gypsy -1282 3199 2501 4 770 418 306 158 22 chr3L 24333579 24333895 -209662 + Copia2_I LTR Copia 3222 3580 -582 4 770 871 331 2 0 chr3L 24333955 24334351 -209206 + Copia2_I LTR Copia 3712 4108 -54 4 770 23399 1 0 0 chr3L 24334503 24337243 -206314 - DOC6_DM LINE Jockey 0 4222 1483 4 770 2116 54 7 0 chr3L 24337242 24337522 -206035 - Baggins1 LINE LOA -3886 1567 1286 4 770 2374 33 7 0 chr3L 24337509 24337814 -205743 - Baggins1 LINE LOA -4512 941 635 4 770 1876 41 146 0 chr3L 24337819 24338086 -205471 - Baggins1 LINE LOA -5146 307 2 4 770 1059 312 52 19 chr3L 24338272 24338949 -204608 - BLASTOPIA_I LTR Gypsy -1282 3199 2501 4 770 418 306 158 22 chr3L 24338995 24339311 -204246 + Copia2_I LTR Copia 3222 3580 -582 4 770 871 331 2 0 chr3L 24339371 24339767 -203790 + Copia2_I LTR Copia 3712 4108 -54 4 770 1109 155 14 15 chr3L 24340657 24341025 -202532 - DNAREP1_DM LINE Penelope -229 365 122 4 770 26 30 0 0 chr3L 24341839 24341872 -201685 + AT_rich Low_complexity Low_complexity 1 33 0 4 770 193 111 67 0 chr3L 24343161 24343206 -200351 + (AATAG)n Simple_repeat Simple_repeat 3 50 0 4 770 599 82 10 0 chr3L 24343206 24343303 -200254 - DNAREP1_DM LINE Penelope -293 301 204 4 770 720 208 52 32 chr3L 24343292 24343540 -200017 - DNAREP1_DM LINE Penelope -321 273 21 4 770 851 85 0 30 chr3L 24343736 24343869 -199688 - Transib-N1_DM DNA Transib -151 363 235 4 770 26 0 0 0 chr3L 24343972 24343998 -199559 + AT_rich Low_complexity Low_complexity 1 26 0 4 770 2143 41 92 0 chr3L 24345263 24345558 -197999 + ROOA_LTR LTR Pao 65 386 0 4 770 25 0 0 0 chr3L 24347556 24347581 -195976 + AT_rich Low_complexity Low_complexity 1 25 0 4 770 2838 34 2 79 chr3L 24348356 24348772 -194785 - MICROPIA_LTR LTR Gypsy 0 476 93 4 770 22 35 0 0 chr3L 24349248 24349277 -194280 + AT_rich Low_complexity Low_complexity 1 29 0 4 770 593 316 19 26 chr3L 24349277 24349882 -193675 - GTWIN_I LTR Gypsy -2883 3538 2878 4 770 247 219 0 0 chr3L 24349909 24349982 -193575 - DM297_I LTR Gypsy -3741 2426 2372 4 770 247 317 7 47 chr3L 24351663 24351812 -191745 - BURDOCK_I LTR Gypsy -4868 992 850 4 770 49 0 0 0 chr3L 24352948 24352997 -190560 + AT_rich Low_complexity Low_complexity 1 49 0 4 770 1045 252 51 3 chr3L 24353460 24353771 -189786 - DIVER2_I LTR Pao -512 3635 3310 4 770 759 333 2 66 chr3L 24353875 24354312 -189245 - DIVER2_I LTR Pao -2907 1240 832 4 770 368 302 0 8 chr3L 24354600 24354730 -188827 - DIVER2_I LTR Pao -3727 420 292 4 770 4587 50 2 13 chr3L 24354846 24355472 -188085 + QUASIMODO_LTR LTR Gypsy 1 619 -39 4 770 21 89 0 0 chr3L 24355564 24355620 -187937 + AT_rich Low_complexity Low_complexity 1 56 0 4 770 411 75 15 0 chr3L 24355750 24355817 -187740 + DNAREP1_DM LINE Penelope 92 159 -435 4 770 1454 189 161 0 chr3L 24356572 24356957 -186600 - DMRT1C LINE R1 -945 4498 4052 4 770 241 163 0 0 chr3L 24356960 24357003 -186554 - DMRT1C LINE R1 -1889 3554 3512 4 770 1859 209 139 0 chr3L 24357062 24357550 -186007 - DMRT1C LINE R1 -2168 3275 2720 4 770 1927 165 117 0 chr3L 24357622 24358041 -185516 - DMRT1C LINE R1 -3060 2383 1916 4 770 540 253 144 15 chr3L 24358073 24358274 -185283 - DNAREP1_DM LINE Penelope -44 550 324 4 770 23 0 0 0 chr3L 24358407 24358430 -185127 + AT_rich Low_complexity Low_complexity 1 23 0 4 770 21 0 0 0 chr3L 24358836 24358857 -184700 + AT_rich Low_complexity Low_complexity 1 21 0 4 770 23 0 0 0 chr3L 24359285 24359308 -184249 + AT_rich Low_complexity Low_complexity 1 23 0 4 770 2195 143 89 27 chr3L 24359450 24359985 -183572 - DNAREP1_DM LINE Penelope -24 570 117 4 770 186 43 0 0 chr3L 24360207 24360230 -183327 + (CATTA)n Simple_repeat Simple_repeat 1 23 0 4 770 484 356 30 28 chr3L 24360745 24361144 -182413 - NOMAD_I LTR Gypsy -88 6484 6085 4 770 228 216 0 0 chr3L 24361756 24361807 -181750 - NOMAD_I LTR Gypsy -561 6011 5961 4 770 821 207 9 17 chr3L 24361987 24362218 -181339 - Stalker2_I LTR Gypsy -1797 5605 5377 4 770 23654 0 0 0 chr3L 24362218 24364946 -178611 + DOC LINE Jockey 1 2728 -1997 4 770 9247 1 0 1 chr3L 24364945 24366018 -177539 + DOC LINE Jockey 3654 4725 0 4 770 593 176 98 0 chr3L 24366019 24366185 -177372 - Stalker2_I LTR Gypsy -2011 5391 5262 4 770 2502 28 28 0 chr3L 24366185 24366507 -177050 - DOC3_DM LINE Jockey 0 4740 4410 4 770 1245 74 121 14 chr3L 24366510 24366717 -176840 - DOC3_DM LINE Jockey -516 4224 3996 4 770 6416 48 42 0 chr3L 24366714 24367585 -175972 - DOC3_DM LINE Jockey -2892 1848 941 4 770 5372 51 1 7 chr3L 24367582 24368298 -175259 - DOC3_DM LINE Jockey -4028 712 1 4 770 5119 81 67 2 chr3L 24368790 24369672 -173885 - DMCR1A LINE CR1 -55 4415 3437 4 770 7947 39 21 25 chr3L 24369672 24370782 -172775 + PROTOP_A DNA P 1 1105 0 4 770 314 152 34 0 chr3L 24370782 24370840 -172717 - DMCR1A LINE CR1 -1026 3444 3385 4 770 3448 150 87 76 chr3L 24370840 24371922 -171635 + PROTOP_B DNA P 1 1094 -59 4 770 10190 84 3 3 chr3L 24371994 24373469 -170088 - DMRT1C LINE R1 -1336 4107 2633 4 770 5402 81 55 1 chr3L 24373468 24374275 -169282 - DMRT1C LINE R1 -2927 2516 1667 4 770 3127 147 52 32 chr3L 24374283 24374978 -168579 - DMRT1C LINE R1 -4733 710 2 4 770 5149 31 27 11 chr3L 24375026 24375684 -167873 + DMCR1A LINE CR1 977 1645 -2825 4 770 4405 37 5 7 chr3L 24375684 24376257 -167300 + PROTOP_A DNA P 1 572 -533 4 770 513 73 42 0 chr3L 24376254 24376350 -167207 + PROTOP DNA P 648 747 -3733 4 770 2091 38 8 0 chr3L 24376350 24376614 -166943 - Invader2_LTR LTR Gypsy 0 266 1 4 770 3027 47 10 0 chr3L 24376614 24377016 -166541 + PROTOP_A DNA P 608 1013 -92 4 770 10358 43 22 0 chr3L 24377020 24378357 -165200 + DMCR1A LINE CR1 1815 3180 -1290 4 96 8027 54 39 0 chr3L 24378352 24379439 -164118 + DMCR1A LINE CR1 3298 4426 -44 4 771 1553 127 8 0 chr3L 24379456 24379716 -163841 - DNAREP1_DM LINE Penelope -106 488 227 4 771 473 289 82 20 chr3L 24379727 24379971 -163586 - Jockey2 LINE Jockey -1414 2014 1756 4 771 461 331 62 21 chr3L 24380770 24381115 -162442 + Gypsy_DS LTR Gypsy 3008 3322 -4200 4 771 397 165 26 92 chr3L 24381057 24381207 -162350 + TLD2 Unknown Unknown 2 141 -77 4 771 2000 30 4 50 chr3L 24381207 24381487 -162070 - MDG3_LTR LTR Gypsy 0 267 1 4 771 35475 12 73 7 chr3L 24381487 24385994 -157563 - MDG3_I LTR Gypsy 0 4986 183 4 771 570 0 0 0 chr3L 24385994 24386060 -157497 - MDG3_I LTR Gypsy -4920 66 1 4 771 1988 34 4 50 chr3L 24386059 24386339 -157218 - MDG3_LTR LTR Gypsy 0 267 1 4 771 512 67 0 0 chr3L 24386343 24386418 -157139 + TLD2 Unknown Unknown 144 218 0 4 771 359 249 40 34 chr3L 24386632 24386797 -156760 + IDEFIX_I LTR Gypsy 2509 2652 -2976 4 771 25 65 0 0 chr3L 24387730 24387776 -155781 + AT_rich Low_complexity Low_complexity 1 46 0 4 771 43 20 0 0 chr3L 24388052 24388102 -155455 + AT_rich Low_complexity Low_complexity 1 50 0 4 771 1531 83 57 32 chr3L 24388258 24388506 -155051 - G5A_DM LINE Jockey 0 2841 2588 4 771 36 23 0 0 chr3L 24388722 24388765 -154792 + AT_rich Low_complexity Low_complexity 1 43 0 4 771 457 304 30 20 chr3L 24388765 24388963 -154594 - LINEJ1_DM LINE Jockey -3780 1240 1041 4 771 580 252 89 30 chr3L 24389604 24389841 -153716 + ROO_I LTR Pao 2987 3237 -5019 4 771 9982 37 116 8 chr3L 24389861 24391701 -151856 - G4_DM LINE Jockey 0 3856 1817 4 771 6002 67 8 11 chr3L 24391729 24392586 -150971 - G4_DM LINE Jockey -2035 1821 967 4 771 1457 22 0 0 chr3L 24392584 24392762 -150795 - G4_DM LINE Jockey -3111 745 568 4 771 1261 38 0 0 chr3L 24392756 24392914 -150643 - G4_DM LINE Jockey -3622 234 77 4 771 1317 114 212 0 chr3L 24392913 24393177 -150380 + DNAREP1_DM LINE Penelope 275 594 0 4 771 24 0 0 0 chr3L 24393369 24393393 -150164 + AT_rich Low_complexity Low_complexity 1 24 0 4 771 1336 168 39 18 chr3L 24393437 24393722 -149835 - DNAREP1_DM LINE Penelope -187 407 117 4 771 905 139 24 0 chr3L 24393723 24393889 -149668 - DNAREP1_DM LINE Penelope -424 170 1 4 771 30 0 0 0 chr3L 24394704 24394734 -148823 + AT_rich Low_complexity Low_complexity 1 30 0 4 771 270 50 0 0 chr3L 24395276 24395316 -148241 + NINJA_I LTR Pao 5972 6011 0 4 771 2629 93 11 58 chr3L 24395379 24395847 -147710 + IDEFIX_LTR LTR Gypsy 133 578 -16 4 771 1875 34 0 0 chr3L 24396112 24396346 -147211 + G4_DM LINE Jockey 1 234 -3622 4 771 1457 22 0 0 chr3L 24396340 24396518 -147039 + G4_DM LINE Jockey 568 745 -3111 4 771 15537 59 74 13 chr3L 24396516 24399241 -144316 + G4_DM LINE Jockey 967 3856 0 4 771 580 252 89 30 chr3L 24399261 24399498 -144059 - ROO_I LTR Pao -5019 3237 2987 4 771 457 304 30 20 chr3L 24400139 24400337 -143220 + LINEJ1_DM LINE Jockey 1041 1240 -3780 4 771 37 23 0 0 chr3L 24400337 24400381 -143176 + AT_rich Low_complexity Low_complexity 1 44 0 4 771 1531 83 57 32 chr3L 24400597 24400845 -142712 + G5A_DM LINE Jockey 2588 2841 0 4 771 43 20 0 0 chr3L 24401001 24401051 -142506 + AT_rich Low_complexity Low_complexity 1 50 0 4 771 5402 14 11 0 chr3L 24402230 24402881 -140676 + QUASIMODO_LTR LTR Gypsy 1 658 0 4 771 49344 10 4 1 chr3L 24402881 24408921 -134636 + QUASIMODO_I LTR Gypsy 1 6060 0 4 771 5501 12 0 3 chr3L 24408921 24409581 -133976 + QUASIMODO_LTR LTR Gypsy 1 658 0 4 771 446 306 0 7 chr3L 24409815 24409963 -133594 + GTWIN_LTR LTR Gypsy 76 222 -273 4 771 702 41 49 0 chr3L 24409990 24410112 -133445 - PROTOP_B DNA P -386 767 640 4 771 1683 98 58 24 chr3L 24410113 24410407 -133150 + Gypsy8_LTR LTR Gypsy 1 304 0 4 771 1269 79 27 40 chr3L 24410407 24410630 -132927 + Gypsy8_I LTR Gypsy 1 220 -4127 4 771 4535 43 15 31 chr3L 24411272 24411926 -131631 - PROTOP_B DNA P -509 644 1 4 771 728 69 10 0 chr3L 24412050 24412151 -131406 + PROTOP_B DNA P 1 102 -1051 4 771 1777 332 37 43 chr3L 24412162 24414332 -129225 - Invader6_I LTR Gypsy -1919 2180 1 4 771 180 0 0 0 chr3L 24414736 24414756 -128801 + (T)n Simple_repeat Simple_repeat 1 20 0 4 771 7676 28 7 0 chr3L 24414757 24415713 -127844 + DMRT1B LINE R1 155 1117 -4066 4 771 10646 27 14 0 chr3L 24415709 24417032 -126525 + DMRT1B LINE R1 1227 2568 -2615 4 771 4897 34 113 0 chr3L 24417023 24417766 -125791 + DMRT1B LINE R1 4357 5183 0 4 771 3744 76 44 5 chr3L 24417770 24418337 -125220 + IDEFIX_LTR LTR Gypsy 6 594 0 4 771 4975 184 18 15 chr3L 24418849 24419879 -123678 + IDEFIX_I LTR Gypsy 1 1034 -4594 4 771 3477 105 8 0 chr3L 24419866 24420390 -123167 + IDEFIX_I LTR Gypsy 1137 1664 -3964 4 771 3169 135 36 7 chr3L 24420384 24420943 -122614 + IDEFIX_I LTR Gypsy 1918 2492 -3136 4 771 5230 120 5 12 chr3L 24420962 24421842 -121715 + IDEFIX_I LTR Gypsy 2615 3487 -2141 4 771 15032 15 0 1 chr3L 24421836 24423605 -119952 - Gypsy6_I LTR Gypsy -1768 5244 3477 4 771 4518 142 39 6 chr3L 24423607 24424452 -119105 + IDEFIX_I LTR Gypsy 3391 4263 -1365 4 771 4450 134 28 19 chr3L 24424453 24425281 -118276 + IDEFIX_I LTR Gypsy 4506 5340 -288 4 771 67 0 0 0 chr3L 24425281 24425348 -118209 + AT_rich Low_complexity Low_complexity 1 67 0 4 771 283 197 0 15 chr3L 24425355 24425422 -118135 + Transib-N1_DM DNA Transib 41 106 -408 4 771 184 134 19 58 chr3L 24425961 24426064 -117493 + (TTTA)n Simple_repeat Simple_repeat 2 100 0 4 771 25 31 0 0 chr3L 24426317 24426349 -117208 + AT_rich Low_complexity Low_complexity 1 32 0 4 771 2777 28 39 0 chr3L 24426349 24426705 -116852 - QUASIMODO_LTR LTR Gypsy 0 658 289 4 771 7715 66 34 1 chr3L 24426702 24427785 -115772 - DMRT1C LINE R1 -337 5106 3988 4 771 543 52 0 0 chr3L 24427778 24427855 -115702 - QUASIMODO_LTR LTR Gypsy -581 77 1 4 771 524 143 231 8 chr3L 24428889 24429023 -114534 + Transib-N1_DM DNA Transib 351 514 0 4 771 1147 29 0 0 chr3L 24430696 24430836 -112721 - PROTOP DNA P -1 4479 4340 4 771 1198 69 4 20 chr3L 24430835 24431088 -112469 - PROTOP DNA P -371 4109 3940 4 771 291 49 0 0 chr3L 24431099 24431140 -112417 - PROTOP DNA P -3426 1054 1014 4 771 33 85 0 0 chr3L 24431152 24431234 -112323 + AT_rich Low_complexity Low_complexity 1 82 0 4 771 3501 55 8 2 chr3L 24431234 24431711 -111846 - DMRT1C LINE R1 -976 4467 3988 4 771 543 52 0 0 chr3L 24431704 24431781 -111776 - QUASIMODO_LTR LTR Gypsy -581 77 1 4 771 724 0 0 0 chr3L 24432310 24432394 -111163 + DM1731_LTR LTR Copia 1 84 -252 4 771 14517 12 1 1 chr3L 24432397 24434114 -109443 + DM1731_I LTR Copia 1 1718 -2258 4 771 17446 4 15 2 chr3L 24434111 24436166 -107391 + DM1731_I LTR Copia 1897 3976 0 4 771 2730 30 0 0 chr3L 24436166 24436502 -107055 + DM1731_LTR LTR Copia 1 336 0 4 771 524 143 231 8 chr3L 24437012 24437146 -106411 + Transib-N1_DM DNA Transib 351 514 0 4 771 2783 71 13 13 chr3L 24438815 24439316 -104241 - PROTOP_A DNA P 0 1105 689 4 771 291 49 0 0 chr3L 24439327 24439368 -104189 - PROTOP DNA P -3426 1054 1014 4 771 2498 55 57 0 chr3L 24439405 24439771 -103786 - PROTOP DNA P -4092 388 1 4 771 871 330 136 10 chr3L 24439771 24440713 -102844 + Invader1_I LTR Gypsy 1384 2296 -890 4 771 1695 107 93 29 chr3L 24440736 24441081 -102476 - ROVER-LTR_DM LTR Gypsy 0 367 1 4 771 1224 155 75 17 chr3L 24441081 24441376 -102181 - ROVER-I_DM LTR Gypsy 0 6584 6273 4 771 1477 338 59 46 chr3L 24441708 24444592 -98965 + Copia2_I LTR Copia 140 3060 -1102 4 771 593 295 40 40 chr3L 24444603 24444981 -98576 + Copia2_I LTR Copia 3658 4035 -127 4 771 1334 161 3 0 chr3L 24445261 24445547 -98010 - ROVER-I_DM LTR Gypsy -308 6276 5990 4 771 17549 199 7 8 chr3L 24445582 24449345 -94212 - ROVER-I_DM LTR Gypsy -1276 5308 1549 4 771 8909 27 0 0 chr3L 24449354 24450459 -93098 + PROTOP_A DNA P 1 1105 0 4 771 2202 246 189 8 chr3L 24450471 24451645 -91912 - ROVER-I_DM LTR Gypsy -5050 1534 148 4 771 783 186 93 134 chr3L 24451652 24452198 -91359 - ROVER-I_DM LTR Gypsy -6060 524 1 4 771 1699 102 96 29 chr3L 24452198 24452542 -91015 - ROVER-LTR_DM LTR Gypsy 0 367 1 4 771 292 309 62 27 chr3L 24452569 24452788 -90769 + Invader1_I LTR Gypsy 3345 3539 -560 4 771 3136 87 95 9 chr3L 24453188 24453723 -89834 - IDEFIX_LTR LTR Gypsy 0 594 14 4 771 2228 119 40 2 chr3L 24453726 24454130 -89427 - IDEFIX_I LTR Gypsy -1 5627 5209 4 771 11368 58 84 6 chr3L 24454129 24455845 -87712 + DOC5_DM LINE Jockey 963 2811 -1871 4 771 4396 40 102 40 chr3L 24455852 24456502 -87055 + DOC5_DM LINE Jockey 3275 3964 -718 4 771 1509 32 0 0 chr3L 24456502 24456688 -86869 + PROTOP_A DNA P 1 186 -919 4 771 3911 25 4 4 chr3L 24456688 24457170 -86387 + Gypsy_LTR LTR Gypsy 1 482 0 4 771 56357 7 1 0 chr3L 24457168 24463667 -79890 + Gypsy_I LTR Gypsy 1 6507 0 4 771 3911 25 4 4 chr3L 24463667 24464149 -79408 + Gypsy_LTR LTR Gypsy 1 482 0 4 771 7287 25 4 1 chr3L 24464149 24465069 -78488 + PROTOP_A DNA P 183 1105 0 4 771 4226 34 113 5 chr3L 24465069 24465723 -77834 + DOC5_DM LINE Jockey 3958 4682 0 4 771 21 0 0 0 chr3L 24465723 24465744 -77813 + AT_rich Low_complexity Low_complexity 1 21 0 4 771 2161 149 19 26 chr3L 24465744 24466170 -77387 - Invader1_LTR LTR Gypsy 0 423 1 4 771 24 0 0 0 chr3L 24466170 24466194 -77363 + AT_rich Low_complexity Low_complexity 1 24 0 4 771 3147 150 16 25 chr3L 24466194 24466802 -76755 - IDEFIX_I LTR Gypsy -520 5108 4506 4 771 2711 135 16 0 chr3L 24466803 24467256 -76301 - IDEFIX_I LTR Gypsy -1365 4263 3804 4 771 2971 39 26 0 chr3L 24467256 24467640 -75917 + Gypsy6_LTR LTR Gypsy 1 394 -13 4 771 898 46 4 230 chr3L 24467662 24467888 -75669 + Gypsy6_I LTR Gypsy 1 175 -6837 4 771 36200 18 24 2 chr3L 24467899 24472283 -71274 + Gypsy6_I LTR Gypsy 767 5244 -1768 4 771 5230 120 5 12 chr3L 24472277 24473157 -70400 - IDEFIX_I LTR Gypsy -2141 3487 2615 4 771 3102 139 29 7 chr3L 24473160 24473705 -69852 - IDEFIX_I LTR Gypsy -3154 2474 1918 4 771 9068 158 13 9 chr3L 24473699 24475357 -68200 - IDEFIX_I LTR Gypsy -3964 1664 1 4 771 3744 76 44 5 chr3L 24475868 24476435 -67122 - IDEFIX_LTR LTR Gypsy 0 594 6 4 771 4897 34 113 0 chr3L 24476439 24477182 -66375 - DMRT1B LINE R1 0 5183 4357 4 771 10619 29 14 0 chr3L 24477173 24478496 -65061 - DMRT1B LINE R1 -2615 2568 1227 4 771 7701 28 8 0 chr3L 24478492 24479453 -64104 - DMRT1B LINE R1 -4066 1117 149 4 771 1749 330 37 43 chr3L 24479913 24482044 -61513 + Invader6_I LTR Gypsy 40 2180 -1919 4 771 746 59 10 0 chr3L 24482055 24482156 -61401 - PROTOP_B DNA P -1051 102 1 4 771 4085 43 68 32 chr3L 24482280 24482902 -60655 + PROTOP_B DNA P 1 644 -509 4 771 1269 79 27 40 chr3L 24483544 24483767 -59790 - Gypsy8_I LTR Gypsy -4127 220 1 4 771 1683 98 58 24 chr3L 24483767 24484061 -59496 - Gypsy8_LTR LTR Gypsy 0 304 1 4 771 702 41 49 0 chr3L 24484062 24484184 -59373 + PROTOP_B DNA P 640 767 -386 4 771 446 306 0 7 chr3L 24484211 24484359 -59198 - GTWIN_LTR LTR Gypsy -273 222 76 4 771 246 319 42 8 chr3L 24484610 24484730 -58827 + MDG1_I LTR Gypsy 1851 1974 -4622 4 771 713 114 9 0 chr3L 24484733 24484847 -58710 + DNAREP1_DM LINE Penelope 4 118 -476 4 771 345 105 18 0 chr3L 24484850 24484907 -58650 + DNAREP1_DM LINE Penelope 433 490 -104 4 771 897 101 0 7 chr3L 24485785 24485924 -57633 - DM297_LTR LTR Gypsy -86 328 191 4 771 427 153 101 10 chr3L 24485954 24486053 -57504 - DM297_LTR LTR Gypsy -306 108 1 4 771 894 114 55 33 chr3L 24486057 24486238 -57319 - DM176_I LTR Gypsy -7 6413 6229 4 771 530 80 11 11 chr3L 24486261 24486350 -57207 - I_DM LINE I -767 5464 5376 4 771 10630 66 65 5 chr3L 24486350 24489550 -54007 - I_DM LINE I -1348 4883 88 4 771 654 79 123 0 chr3L 24489537 24489651 -53906 - DM297_I LTR Gypsy -187 5980 5853 4 771 1873 84 3 10 chr3L 24489648 24489961 -53596 - DM297_I LTR Gypsy -433 5734 5424 4 771 1951 101 14 3 chr3L 24489963 24490310 -53247 - DM297_I LTR Gypsy -1436 4731 4381 4 771 2333 34 129 0 chr3L 24490534 24490860 -52697 + PROTOP_A DNA P 1 368 -737 4 771 4093 38 0 0 chr3L 24490854 24491380 -52177 + PROTOP_A DNA P 580 1105 0 4 771 2285 236 18 130 chr3L 24491392 24493119 -50438 - ROVER-I_DM LTR Gypsy -5050 1534 1 4 771 1699 102 96 29 chr3L 24493119 24493463 -50094 - ROVER-LTR_DM LTR Gypsy 0 367 1 4 771 292 309 62 27 chr3L 24493490 24493709 -49848 + Invader6_I LTR Gypsy 3345 3539 -560 4 771 3136 87 95 9 chr3L 24494109 24494644 -48913 - IDEFIX_LTR LTR Gypsy 0 594 14 4 771 2228 119 40 2 chr3L 24494647 24495051 -48506 - IDEFIX_I LTR Gypsy -1 5627 5209 4 771 5727 43 55 4 chr3L 24495050 24495864 -47693 + DOC5_DM LINE Jockey 963 1818 -2864 4 771 800 54 9 0 chr3L 24495879 24495991 -47566 + DOC5_DM LINE Jockey 1917 2029 -2653 4 771 6582 27 50 8 chr3L 24495988 24496834 -46723 + DMCR1A LINE CR1 765 1645 -2825 4 771 6223 80 60 79 chr3L 24496834 24498010 -45547 + PROTOP_B DNA P 1 1153 0 4 771 31 0 0 0 chr3L 24498197 24498228 -45329 + AT_rich Low_complexity Low_complexity 1 31 0 4 771 25 0 0 0 chr3L 24498610 24498635 -44922 + AT_rich Low_complexity Low_complexity 1 25 0 4 771 4830 57 46 0 chr3L 24498635 24499287 -44270 - BS2 LINE Jockey 0 4721 4040 4 771 5558 45 28 0 chr3L 24499289 24500000 -43557 - BS2 LINE Jockey -791 3930 3200 4 771 6655 68 5 5 chr3L 24500000 24500883 -42674 - BS2 LINE Jockey -1522 3199 2317 4 771 8114 81 25 0 chr3L 24500832 24501935 -41622 + BS2 LINE Jockey 611 1741 -2980 4 771 1062 84 0 7 chr3L 24502350 24502505 -41052 - DM297_I LTR Gypsy -1784 4383 4230 4 771 1554 70 41 16 chr3L 24502504 24502749 -40808 - DM297_I LTR Gypsy -2119 4048 3798 4 771 2879 66 71 2 chr3L 24502889 24503282 -40275 - Gypsy6A_LTR LTR Gypsy 0 420 1 4 771 39 68 0 0 chr3L 24503327 24503401 -40156 + AT_rich Low_complexity Low_complexity 1 74 0 4 771 185 77 56 37 chr3L 24503567 24503621 -39936 + (CTATT)n Simple_repeat Simple_repeat 3 57 0 4 771 2351 85 8 0 chr3L 24503981 24504334 -39223 - DM297_I LTR Gypsy -2357 3810 3455 4 771 2741 117 162 12 chr3L 24504318 24504897 -38660 - DM297_I LTR Gypsy -3909 2258 1593 4 771 277 197 0 0 chr3L 24504895 24504956 -38601 - DM297_I LTR Gypsy -5318 849 789 4 771 724 181 0 0 chr3L 24504969 24505096 -38461 - DM297_I LTR Gypsy -5532 635 509 4 771 1272 177 28 20 chr3L 24505125 24505477 -38080 - DM297_I LTR Gypsy -5812 355 1 4 771 1823 159 31 59 chr3L 24505481 24505903 -37654 - DM297_LTR LTR Gypsy -4 410 1 4 771 298 200 43 138 chr3L 24506007 24506123 -37434 + DM176_LTR LTR Gypsy 190 294 -213 4 771 2360 274 14 14 chr3L 24506500 24507380 -36177 - Copia_I LTR Copia -2314 2279 1400 4 771 1341 96 5 0 chr3L 24508592 24508779 -34778 + Gypsy12A_LTR LTR Gypsy 2086 2273 -7 4 771 1841 191 75 2 chr3L 24508779 24509205 -34352 + DMRT1B LINE R1 3269 3774 -1409 4 771 909 134 101 0 chr3L 24509203 24509352 -34205 + DMRT1B LINE R1 5000 5163 -20 4 771 2048 49 4 0 chr3L 24509790 24510055 -33502 - DOC3_DM LINE Jockey 0 4740 4475 4 96 11332 38 66 0 chr3L 24510053 24511480 -32077 + DOC3_DM LINE Jockey 3218 4738 -2 4 772 1282 205 118 26 chr3L 24511711 24512017 -31540 + Gypsy8_I LTR Gypsy 1068 1401 -2946 4 772 545 202 0 0 chr3L 24512112 24512238 -31319 + Gypsy8_I LTR Gypsy 1836 1921 -2426 4 772 6974 29 31 5 chr3L 24512255 24513726 -29831 + DMCR1A LINE CR1 138 1645 -2825 4 772 9201 27 4 1 chr3L 24513726 24514828 -28729 + PROTOP_A DNA P 1 1105 0 4 772 12152 40 33 0 chr3L 24514828 24516321 -27236 + DMCR1A LINE CR1 1639 3180 -1290 4 772 8313 51 66 5 chr3L 24516316 24517422 -26135 + DMCR1A LINE CR1 3298 4470 0 4 772 717 146 0 0 chr3L 24517425 24517555 -26002 + Gypsy8_I LTR Gypsy 1918 2047 -2300 4 772 42 20 0 0 chr3L 24518137 24518186 -25371 + AT_rich Low_complexity Low_complexity 1 49 0 4 772 54 29 0 0 chr3L 24519090 24519158 -24399 + AT_rich Low_complexity Low_complexity 1 68 0 4 772 2677 129 205 9 chr3L 24519919 24520465 -23092 + DMCR1A LINE CR1 2369 3021 -1449 4 772 701 120 19 0 chr3L 24520495 24520603 -22954 + DMCR1A LINE CR1 3291 3400 -1070 4 772 951 154 43 0 chr3L 24520600 24520762 -22795 + DMCR1A LINE CR1 3556 3724 -746 4 772 671 157 0 0 chr3L 24520765 24520873 -22684 + DMCR1A LINE CR1 4017 4124 -346 4 772 839 299 143 0 chr3L 24520864 24521248 -22309 + Gypsy4_I LTR Gypsy 3171 3609 -2679 4 772 316 313 0 0 chr3L 24522194 24522293 -21264 - DIVER2_I LTR Pao -2729 1418 1320 4 772 194 150 0 24 chr3L 24522743 24522784 -20773 + (TTA)n Simple_repeat Simple_repeat 3 42 0 4 772 402 191 87 33 chr3L 24522866 24522958 -20599 - DNAREP1_DM LINE Penelope -122 472 376 4 772 2864 69 71 2 chr3L 24523176 24523569 -19988 - Gypsy6A_LTR LTR Gypsy 0 420 1 4 772 57 71 0 0 chr3L 24523637 24523750 -19807 + AT_rich Low_complexity Low_complexity 1 113 0 4 772 26 50 0 0 chr3L 24523942 24523982 -19575 + AT_rich Low_complexity Low_complexity 1 40 0 4 772 528 178 105 6 chr3L 24524315 24524496 -19061 - DNAREP1_DM LINE Penelope -279 315 115 4 772 231 178 22 0 chr3L 24524544 24524589 -18968 + DNAREP1_DM LINE Penelope 399 444 -150 4 772 376 74 19 0 chr3L 24524583 24524637 -18920 + DNAREP1_DM LINE Penelope 540 594 0 4 772 241 149 0 41 chr3L 24524684 24524733 -18824 + DNAREP1_DM LINE Penelope 55 101 -493 4 772 695 136 93 0 chr3L 24524732 24524850 -18707 + DNAREP1_DM LINE Penelope 273 401 -193 4 772 29 0 0 0 chr3L 24524959 24524988 -18569 + AT_rich Low_complexity Low_complexity 1 29 0 4 772 195 19 115 0 chr3L 24525139 24525191 -18366 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 772 253 273 0 0 chr3L 24525602 24525679 -17878 - Invader2_I LTR Gypsy -630 3962 3886 4 772 225 0 0 0 chr3L 24525993 24526018 -17539 + (CTTTA)n Simple_repeat Simple_repeat 5 29 0 4 772 184 0 62 31 chr3L 24526498 24526530 -17027 + (TTTTTA)n Simple_repeat Simple_repeat 4 36 0 4 772 507 301 59 13 chr3L 24526629 24526868 -16689 - MDG3_I LTR Gypsy -1548 3438 3189 4 772 24 0 0 0 chr3L 24527120 24527144 -16413 + AT_rich Low_complexity Low_complexity 1 24 0 4 772 22 56 0 0 chr3L 24528779 24528815 -14742 + AT_rich Low_complexity Low_complexity 1 36 0 4 772 570 229 93 0 chr3L 24529726 24529866 -13691 - DNAREP1_DM LINE Penelope -122 472 320 4 772 379 179 164 6 chr3L 24529900 24530047 -13510 - DNAREP1_DM LINE Penelope -279 315 129 4 772 278 196 284 53 chr3L 24530080 24530270 -13287 - DNAREP1_DM LINE Penelope -346 248 15 4 772 613 118 385 0 chr3L 24530283 24530418 -13139 + DNAREP1_DM LINE Penelope 408 594 0 4 772 334 170 154 2 chr3L 24531080 24531182 -12375 - DNAREP1_DM LINE Penelope -279 315 115 4 772 238 205 49 49 chr3L 24531225 24531307 -12250 - DNAREP1_DM LINE Penelope -348 246 165 4 772 1186 80 0 0 chr3L 24531395 24531546 -12011 - PROTOP_B DNA P 0 1153 1003 4 772 2118 50 182 15 chr3L 24531542 24532117 -11440 - PROTOP_B DNA P -292 861 190 4 772 1289 74 0 5 chr3L 24532114 24532319 -11238 - S_DM DNA Tc1 -20 1716 1513 4 772 1197 279 89 19 chr3L 24532317 24532891 -10666 - Gypsy4_I LTR Gypsy -2143 4145 3544 4 772 1568 262 131 8 chr3L 24532998 24533579 -9978 - Gypsy4_I LTR Gypsy -2420 3440 2677 4 772 862 301 15 6 chr3L 24533611 24533945 -9612 - Gypsy10_I LTR Gypsy -2683 2595 2259 4 772 26 74 0 0 chr3L 24535421 24535475 -8082 + AT_rich Low_complexity Low_complexity 1 54 0 4 772 26 82 0 0 chr3L 24536586 24536647 -6910 + AT_rich Low_complexity Low_complexity 1 61 0 4 772 3918 37 18 18 chr3L 24537134 24537635 -5922 - PROTOP DNA P -3946 534 34 4 772 6890 89 5 0 chr3L 24537607 24538532 -5025 + Gypsy3_I LTR Gypsy 2312 3241 -2936 4 772 1682 118 103 0 chr3L 24538531 24538802 -4755 + Gypsy3_I LTR Gypsy 4134 4432 -1745 4 772 274 146 0 94 chr3L 24538789 24538842 -4715 + Gypsy_DS LTR Gypsy 5346 5393 -2129 4 772 646 132 0 36 chr3L 24538810 24538920 -4637 + Gypsy3_I LTR Gypsy 4537 4642 -1535 4 772 1906 184 0 0 chr3L 24538891 24539212 -4345 + Gypsy3_I LTR Gypsy 4936 5256 -921 4 772 26 82 0 0 chr3L 24540084 24540145 -3412 + AT_rich Low_complexity Low_complexity 1 61 0 4 772 3918 37 18 18 chr3L 24540632 24541133 -2424 - PROTOP DNA P -3946 534 34 4 772 6913 88 5 0 chr3L 24541105 24542030 -1527 + Gypsy3_I LTR Gypsy 2312 3241 -2936 4 772 1698 114 103 0 chr3L 24542029 24542300 -1257 + Gypsy3_I LTR Gypsy 4134 4432 -1745 4 772 274 146 0 94 chr3L 24542287 24542340 -1217 + Gypsy_DS LTR Gypsy 5346 5393 -2129 4 772 646 132 0 36 chr3L 24542308 24542418 -1139 + Gypsy3_I LTR Gypsy 4537 4642 -1535 4 772 1906 184 0 0 chr3L 24542389 24542710 -847 + Gypsy3_I LTR Gypsy 4936 5256 -921 4 585 23 33 0 0 chr3RHet 971 1001 -2516506 + AT_rich Low_complexity Low_complexity 1 30 0 5 585 714 124 337 0 chr3RHet 1750 1952 -2515555 - DNAREP1_DM LINE Penelope 0 594 325 5 585 325 235 99 56 chr3RHet 2005 2167 -2515340 - MAX_LTR LTR Pao -61 260 92 5 585 677 171 151 0 chr3RHet 2314 2460 -2515047 - MAX_I LTR Pao -175 7739 7572 5 585 251 234 0 30 chr3RHet 2617 2683 -2514824 + G2_DM LINE Jockey 2625 2688 -414 5 585 3870 182 40 8 chr3RHet 2879 3611 -2513896 - MAX_I LTR Pao -5399 2515 1761 5 585 384 251 35 35 chr3RHet 3611 3784 -2513723 + Gypsy8_I LTR Gypsy 56 228 -4119 5 585 714 262 70 16 chr3RHet 4404 4660 -2512847 + OSVALDO_I LTR Gypsy 411 680 -5973 5 585 1012 131 160 14 chr3RHet 5066 5315 -2512192 + DNAREP1_DM LINE Penelope 67 331 -263 5 585 1192 191 43 63 chr3RHet 5315 5692 -2511815 + Gypsy8_LTR LTR Gypsy 1 304 0 5 585 320 145 143 14 chr3RHet 5670 5740 -2511767 + Gypsy8_I LTR Gypsy 1 79 -4268 5 585 2690 47 61 6 chr3RHet 6345 6690 -2510817 - Gypsy10_LTR LTR Gypsy 0 364 1 5 585 561 61 0 99 chr3RHet 6691 6782 -2510725 - Gypsy10_I LTR Gypsy -1 5277 5196 5 585 6259 137 96 51 chr3RHet 6901 8263 -2509244 - Gypsy10_I LTR Gypsy -232 6056 4148 5 585 421 133 111 0 chr3RHet 8252 8342 -2509165 - Gypsy10_I LTR Gypsy -1796 3482 3383 5 585 424 267 8 0 chr3RHet 8334 8454 -2509053 - Gypsy_I LTR Gypsy -2314 4193 4073 5 585 302 340 50 43 chr3RHet 10103 10663 -2506844 + Invader3_I LTR Gypsy 2927 3490 -1398 5 585 757 144 0 16 chr3RHet 11350 11477 -2506030 + PROTOP DNA P 9 133 -4347 5 585 1451 146 51 54 chr3RHet 11484 12027 -2505480 + PROTOP DNA P 3924 4112 -368 5 585 239 114 0 0 chr3RHet 12724 12759 -2504748 - DNAREP1_DM LINE Penelope -104 490 456 5 585 358 165 153 10 chr3RHet 12763 12861 -2504646 - DNAREP1_DM LINE Penelope -281 313 202 5 585 396 119 23 23 chr3RHet 12848 12934 -2504573 - DNAREP1_DM LINE Penelope -307 287 202 5 585 2699 87 26 10 chr3RHet 12931 13349 -2504158 - DM297_I LTR Gypsy -4000 2167 1743 5 585 8757 83 43 3 chr3RHet 13365 14696 -2502811 - DM297_I LTR Gypsy -4764 1403 20 5 585 1774 108 21 77 chr3RHet 14702 15042 -2502465 - DM297_LTR LTR Gypsy -18 396 76 5 585 352 123 51 76 chr3RHet 16843 16922 -2500585 - DM297_LTR LTR Gypsy -328 86 10 5 585 1203 104 51 19 chr3RHet 16936 17378 -2500129 + PROTOP DNA P 3938 4479 -1 5 585 29 0 0 0 chr3RHet 17996 18025 -2499482 + AT_rich Low_complexity Low_complexity 1 29 0 5 585 1299 108 59 3 chr3RHet 18067 18275 -2499232 - DNAREP1_DM LINE Penelope -104 490 284 5 585 2693 82 124 9 chr3RHet 18272 18717 -2498790 - DMCR1A LINE CR1 -2809 1661 1166 5 585 3332 81 110 23 chr3RHet 18729 19686 -2497821 - DMCR1A LINE CR1 -3424 1046 7 5 585 813 206 33 55 chr3RHet 19699 20024 -2497483 - DNAREP1_DM LINE Penelope -259 335 65 5 585 483 104 0 0 chr3RHet 20047 20114 -2497393 - Gypsy8_LTR LTR Gypsy -237 67 1 5 585 466 179 0 152 chr3RHet 20113 20258 -2497249 - Gypsy8_I LTR Gypsy 0 4347 4225 5 585 564 196 50 19 chr3RHet 20268 20517 -2496990 - Gypsy8_I LTR Gypsy -397 3950 3581 5 585 341 268 8 31 chr3RHet 20792 20919 -2496588 + (CGG)n Simple_repeat Simple_repeat 2 125 0 5 585 4198 115 101 37 chr3RHet 20919 21705 -2495802 - Gypsy8_I LTR Gypsy -1369 2978 2143 5 585 395 189 14 0 chr3RHet 21703 21805 -2495702 - Gypsy8_I LTR Gypsy -2453 1894 1836 5 585 2437 159 50 45 chr3RHet 21815 22329 -2495178 - Gypsy8_I LTR Gypsy -2851 1496 1034 5 585 582 303 52 9 chr3RHet 22454 22667 -2494840 - Gypsy8_I LTR Gypsy -5868 785 564 5 585 904 152 37 47 chr3RHet 23701 23915 -2493592 - Gypsy8_I LTR Gypsy -4135 212 1 5 585 1212 173 34 30 chr3RHet 23915 24275 -2493232 - Gypsy8_LTR LTR Gypsy 0 304 1 5 585 1023 126 160 10 chr3RHet 24275 24523 -2492984 - DNAREP1_DM LINE Penelope -263 331 67 5 585 18916 37 7 8 chr3RHet 25064 27310 -2490197 + G5_DM LINE Jockey 2601 4844 -12 5 585 5488 87 121 18 chr3RHet 27488 29119 -2488388 + DMCR1A LINE CR1 172 1969 -2501 5 585 2336 57 98 0 chr3RHet 29117 29433 -2488074 + DMCR1A LINE CR1 2262 2608 -1862 5 585 4618 63 66 27 chr3RHet 29442 30106 -2487401 + DMCR1A LINE CR1 2894 3583 -887 5 585 3937 103 21 0 chr3RHet 30095 30669 -2486838 + DMCR1A LINE CR1 3885 4470 0 5 585 22 35 0 0 chr3RHet 30941 30970 -2486537 + AT_rich Low_complexity Low_complexity 1 29 0 5 585 386 221 92 68 chr3RHet 31067 31348 -2486159 + Transib5 DNA Transib 15 302 -2699 5 585 2350 152 153 14 chr3RHet 32847 33697 -2483810 + DMCR1A LINE CR1 658 1625 -2845 5 585 345 24 0 23 chr3RHet 33691 33734 -2483773 + DMCR1A LINE CR1 2535 2576 -1894 5 585 1068 102 47 29 chr3RHet 33729 33901 -2483606 + DMCR1A LINE CR1 2992 3166 -1304 5 585 3180 57 5 0 chr3RHet 33887 34290 -2483217 - PROTOP_B DNA P -748 405 1 5 585 2594 82 20 11 chr3RHet 34290 34656 -2482851 + DMCR1A LINE CR1 3381 3857 -613 5 585 387 111 0 0 chr3RHet 34710 34764 -2482743 + Invader2_I LTR Gypsy 1887 1940 -2652 5 585 6911 65 98 2 chr3RHet 34792 36336 -2481171 - DM297_I LTR Gypsy -2296 3871 2179 5 585 11538 63 52 0 chr3RHet 36344 37813 -2479694 - BS3_DM LINE Jockey -244 1546 1 5 585 4755 157 27 6 chr3RHet 37935 39001 -2478506 - BS2 LINE Jockey -2408 2313 1175 5 585 530 165 0 0 chr3RHet 39015 39106 -2478401 - BS2 LINE Jockey -3680 1041 951 5 585 225 230 0 47 chr3RHet 39103 39167 -2478340 - G5_DM LINE Jockey -4389 467 407 5 585 1838 107 58 7 chr3RHet 39217 39508 -2477999 - BS2 LINE Jockey -4405 316 11 5 585 308 180 122 11 chr3RHet 39517 39607 -2477900 + Invader2_LTR LTR Gypsy 150 249 -17 5 585 337 96 39 0 chr3RHet 39593 39645 -2477862 + Invader2_I LTR Gypsy 1939 1992 -2600 5 585 280 103 0 0 chr3RHet 39644 39683 -2477824 - Invader2_I LTR Gypsy -1961 2631 2593 5 585 3340 105 52 0 chr3RHet 39678 40202 -2477305 + Invader2_I LTR Gypsy 2494 3044 -1548 5 585 631 195 0 63 chr3RHet 40613 40788 -2476719 - Gypsy8_I LTR Gypsy -4118 229 66 5 585 4290 100 84 6 chr3RHet 40860 41563 -2475944 + Invader2_I LTR Gypsy 3030 3787 -805 5 585 7285 44 37 3 chr3RHet 41565 42479 -2475028 + G3_DM LINE Jockey 1999 2943 -1662 5 585 1018 35 0 0 chr3RHet 42489 42605 -2474902 + G3_DM LINE Jockey 3394 3509 -1096 5 585 2838 43 46 0 chr3RHet 42615 42988 -2474519 + DOC5_DM LINE Jockey 1 390 -4292 5 585 2125 102 0 0 chr3RHet 42978 43283 -2474224 + Invader2_I LTR Gypsy 2708 3012 -1580 5 585 623 195 0 63 chr3RHet 43720 43895 -2473612 - Gypsy8_I LTR Gypsy -4118 229 66 5 585 4385 94 84 6 chr3RHet 43967 44670 -2472837 + Invader2_I LTR Gypsy 3030 3787 -805 5 585 7302 43 37 3 chr3RHet 44672 45586 -2471921 + G3_DM LINE Jockey 1999 2943 -1662 5 585 1018 35 0 0 chr3RHet 45596 45712 -2471795 + G3_DM LINE Jockey 3394 3509 -1096 5 585 2980 44 18 0 chr3RHet 45722 46105 -2471402 + DOC5_DM LINE Jockey 1 390 -4292 5 585 2108 105 0 0 chr3RHet 46095 46400 -2471107 + Invader2_I LTR Gypsy 2708 3012 -1580 5 585 43290 1 0 0 chr3RHet 46539 51231 -2466276 + FW_DM LINE Jockey 1 4692 0 5 585 641 189 0 63 chr3RHet 51559 51734 -2465773 - Gypsy8_I LTR Gypsy -4118 229 66 5 585 1860 90 61 0 chr3RHet 51806 52084 -2465423 + Invader2_I LTR Gypsy 3030 3324 -1268 5 585 20578 2 0 0 chr3RHet 53084 55344 -2462163 - TRANSPAC_I LTR Gypsy -2329 2261 1 5 585 3041 9 0 0 chr3RHet 55344 55674 -2461833 - TRANSPAC_LTR LTR Gypsy 0 330 1 5 585 12783 30 22 3 chr3RHet 55674 57185 -2460322 + DMCR1A LINE CR1 2931 4470 0 5 585 21 36 0 0 chr3RHet 57606 57634 -2459873 + AT_rich Low_complexity Low_complexity 1 28 0 5 585 241 288 18 18 chr3RHet 57804 57917 -2459590 + Gypsy6_I LTR Gypsy 4602 4714 -2298 5 585 24 0 0 0 chr3RHet 58336 58360 -2459147 + AT_rich Low_complexity Low_complexity 1 24 0 5 585 460 78 0 0 chr3RHet 58477 58541 -2458966 + DM1731_LTR LTR Copia 29 92 -244 5 585 2934 50 58 46 chr3RHet 58542 59031 -2458476 - DM176_LTR LTR Gypsy -26 481 1 5 585 53200 5 0 9 chr3RHet 59031 65506 -2452001 - DM176_I LTR Gypsy 0 6420 1 5 585 2906 47 63 47 chr3RHet 65506 65992 -2451515 - DM176_LTR LTR Gypsy -27 480 1 5 585 2060 58 4 4 chr3RHet 65992 66243 -2451264 + DM1731_LTR LTR Copia 86 336 0 5 585 32164 19 17 1 chr3RHet 66243 70157 -2447350 + DM1731_I LTR Copia 1 3976 0 5 585 2512 23 3 0 chr3RHet 70157 70464 -2447043 + DM1731_LTR LTR Copia 29 336 0 5 585 389 154 13 0 chr3RHet 71533 71611 -2445896 - Gypsy8_I LTR Gypsy -4268 79 1 5 585 569 207 172 62 chr3RHet 71611 71884 -2445623 - Gypsy8_LTR LTR Gypsy 0 304 2 5 585 21 0 0 0 chr3RHet 71990 72011 -2445496 + AT_rich Low_complexity Low_complexity 1 21 0 5 585 40088 4 0 4 chr3RHet 72352 77066 -2440441 + DOC LINE Jockey 32 4725 0 5 585 1591 25 0 29 chr3RHet 77163 77372 -2440135 - FROGGER_LTR LTR Copia 0 203 1 5 585 13713 22 32 13 chr3RHet 77372 79127 -2438380 - FROGGER_I LTR Copia 0 2077 289 5 585 979 284 60 27 chr3RHet 79309 79910 -2437597 - FROGGER_I LTR Copia -1796 281 129 5 585 5408 335 23 24 chr3RHet 82190 86331 -2431176 + GTWIN_I LTR Gypsy 1202 5318 -1694 5 585 24 0 0 0 chr3RHet 86466 86490 -2431017 + AT_rich Low_complexity Low_complexity 1 24 0 5 585 1124 22 0 0 chr3RHet 88304 88440 -2429067 - FROGGER_I LTR Copia -1941 136 1 5 585 1669 20 0 0 chr3RHet 88441 88643 -2428864 - FROGGER_LTR LTR Copia -1 202 1 5 585 36 23 0 0 chr3RHet 88773 88816 -2428691 + AT_rich Low_complexity Low_complexity 1 43 0 5 585 11412 98 3 1 chr3RHet 88999 90732 -2426775 + S_DM DNA Tc1 1 1736 0 5 585 945 208 123 3 chr3RHet 90740 91024 -2426483 - MINOS DNA Tc1 0 1775 1458 5 585 1129 159 92 0 chr3RHet 91028 91267 -2426240 - MINOS DNA Tc1 -611 1164 904 5 585 301 87 0 0 chr3RHet 91294 91340 -2426167 + DNAREP1_DM LINE Penelope 549 594 0 5 585 767 167 43 0 chr3RHet 91338 91500 -2426007 + DNAREP1_DM LINE Penelope 2 170 -424 5 585 736 170 103 47 chr3RHet 91493 91727 -2425780 + DNAREP1_DM LINE Penelope 86 332 -262 5 585 26 0 0 0 chr3RHet 91757 91783 -2425724 + AT_rich Low_complexity Low_complexity 1 26 0 5 585 1087 112 215 8 chr3RHet 91801 92043 -2425464 + DNAREP1_DM LINE Penelope 302 593 -1 5 585 1598 127 98 53 chr3RHet 92411 92768 -2424739 + STALKER4_LTR LTR Gypsy 1 373 -29 5 585 310 38 17 86 chr3RHet 92817 92875 -2424632 + STALKER4_I LTR Gypsy 13 66 -6464 5 585 3042 0 0 0 chr3RHet 92885 93231 -2424276 + Invader4_LTR LTR Gypsy 1 346 0 5 585 17456 14 18 3 chr3RHet 93231 95553 -2421954 + Invader4_I LTR Gypsy 1 2413 0 5 585 2974 9 0 0 chr3RHet 95553 95899 -2421608 + Invader4_LTR LTR Gypsy 1 346 0 5 585 289 174 235 0 chr3RHet 95899 95997 -2421510 + STALKER4_LTR LTR Gypsy 253 373 -29 5 585 8275 104 60 17 chr3RHet 96046 97434 -2420073 + STALKER4_I LTR Gypsy 13 1461 -5069 5 585 373 0 0 0 chr3RHet 97440 97484 -2420023 + PROTOP_B DNA P 1110 1153 0 5 585 22723 71 12 8 chr3RHet 97484 100749 -2416758 + STALKER4_I LTR Gypsy 2204 5481 -1049 5 585 8781 12 27 0 chr3RHet 100749 101825 -2415682 + PROTOP_A DNA P 1 1105 0 5 585 5460 101 48 34 chr3RHet 101825 102866 -2414641 + STALKER4_I LTR Gypsy 5475 6530 0 5 585 1388 108 41 70 chr3RHet 102866 103136 -2414371 + STALKER4_LTR LTR Gypsy 1 262 -140 5 585 5677 1 0 0 chr3RHet 103504 104162 -2413345 - QUASIMODO_LTR LTR Gypsy 0 658 1 5 585 263 302 16 16 chr3RHet 105313 105441 -2412066 - BLASTOPIA_I LTR Gypsy -746 3735 3608 5 585 271 290 44 25 chr3RHet 105841 106000 -2411507 - MDG3_I LTR Gypsy -1562 3424 3263 5 585 304 305 64 74 chr3RHet 106410 106831 -2410676 - BLASTOPIA_I LTR Gypsy -1885 2596 2180 5 585 6215 29 43 0 chr3RHet 108885 109680 -2407827 - DMRT1A LINE R1 -1853 3330 2502 5 585 7828 20 20 0 chr3RHet 109680 110636 -2406871 - DMRT1A LINE R1 -2936 2247 1273 5 585 952 25 0 0 chr3RHet 110632 110751 -2406756 - DMRT1A LINE R1 -4012 1171 1053 5 585 1498 0 0 6 chr3RHet 110749 110918 -2406589 - PROTOP DNA P -66 4414 4246 5 585 207 0 0 0 chr3RHet 110918 110941 -2406566 + (AAATG)n Simple_repeat Simple_repeat 4 26 0 5 585 1237 55 0 6 chr3RHet 110943 111125 -2406382 - PROTOP_A DNA P -275 830 650 5 585 7894 35 10 0 chr3RHet 111124 112088 -2405419 - PROTOP DNA P -3069 1411 438 5 585 5887 42 25 2 chr3RHet 112081 113287 -2404220 + DMCR1A LINE CR1 3194 4470 0 5 585 21 36 0 0 chr3RHet 113708 113736 -2403771 + AT_rich Low_complexity Low_complexity 1 28 0 5 585 281 304 24 24 chr3RHet 113848 114019 -2403488 + Gypsy6_I LTR Gypsy 4602 4714 -2298 5 585 24 0 0 0 chr3RHet 114438 114462 -2403045 + AT_rich Low_complexity Low_complexity 1 24 0 5 585 418 154 13 0 chr3RHet 115579 115657 -2401850 - Gypsy8_I LTR Gypsy -4268 79 1 5 585 676 207 172 62 chr3RHet 115657 115930 -2401577 - Gypsy8_LTR LTR Gypsy 0 304 2 5 585 12466 32 59 12 chr3RHet 115977 118430 -2399077 + DMCR1A LINE CR1 134 2701 -1769 5 585 1698 42 4 3 chr3RHet 118426 118677 -2398830 + DMCR1A LINE CR1 3705 3999 -471 5 585 706 272 40 28 chr3RHet 118678 118928 -2398579 + NINJA_I LTR Pao 3769 4021 -1990 5 585 2830 304 91 24 chr3RHet 118934 120539 -2396968 + NINJA_I LTR Pao 4299 6011 0 5 585 33 25 0 0 chr3RHet 120703 120743 -2396764 + AT_rich Low_complexity Low_complexity 1 40 0 5 585 24 67 0 0 chr3RHet 120952 120997 -2396510 + AT_rich Low_complexity Low_complexity 1 45 0 5 585 22 0 0 0 chr3RHet 123212 123234 -2394273 + AT_rich Low_complexity Low_complexity 1 22 0 5 585 31 0 0 0 chr3RHet 123538 123569 -2393938 + AT_rich Low_complexity Low_complexity 1 31 0 5 585 22 56 0 0 chr3RHet 124259 124295 -2393212 + AT_rich Low_complexity Low_complexity 1 36 0 5 585 3397 26 0 0 chr3RHet 124300 124683 -2392824 + DIVER2_LTR LTR Pao 3 385 0 5 585 19647 94 90 62 chr3RHet 124683 128190 -2389317 + DIVER2_I LTR Pao 1 3603 -544 5 585 1166 15 0 0 chr3RHet 128190 128325 -2389182 + DIVER2_I LTR Pao 4013 4147 0 5 585 2866 26 94 0 chr3RHet 128327 128677 -2388830 + DIVER2_LTR LTR Pao 3 385 0 5 585 3860 25 2 0 chr3RHet 128751 129198 -2388309 - FW_DM LINE Jockey 0 4692 4245 5 585 5966 30 1 4 chr3RHet 129191 129903 -2387604 - FW_DM LINE Jockey -1533 3159 2450 5 73 19418 17 1 0 chr3RHet 129902 132089 -2385418 - FW_DM LINE Jockey -2498 2194 5 5 586 291 324 9 0 chr3RHet 132105 132216 -2385291 + OSVALDO_I LTR Gypsy 2163 2274 -4379 5 586 313 115 19 0 chr3RHet 132605 132657 -2384850 - Transib5 DNA Transib -2846 155 103 5 586 10876 98 38 1 chr3RHet 133562 135119 -2382388 + S_DM DNA Tc1 1 1614 -122 5 586 2522 38 3 40 chr3RHet 135119 135448 -2382059 - NINJA_LTR LTR Pao 0 317 1 5 586 15038 31 2 3 chr3RHet 135448 137238 -2380269 - NINJA_I LTR Pao 0 6011 4223 5 586 6468 49 156 11 chr3RHet 137219 138185 -2379322 + MDG1_I LTR Gypsy 5489 6594 -2 5 586 459 103 0 143 chr3RHet 138608 138699 -2378808 + MDG1_I LTR Gypsy 1 78 -6518 5 586 2404 107 3 0 chr3RHet 138750 139103 -2378404 + MDG1_I LTR Gypsy 72 425 -6171 5 586 1890 14 0 18 chr3RHet 139103 139320 -2378187 - PROTOP DNA P -1 4479 4267 5 586 5295 42 60 32 chr3RHet 139324 140064 -2377443 - PROTOP_A DNA P -344 761 2 5 586 11559 36 24 1 chr3RHet 140077 141481 -2376026 - M4DM DNA Transib 0 1435 1 5 586 908 151 0 25 chr3RHet 141481 141644 -2375863 + MDG1_I LTR Gypsy 426 584 -6012 5 586 30 0 0 0 chr3RHet 141786 141816 -2375691 + AT_rich Low_complexity Low_complexity 1 30 0 5 586 24 53 0 0 chr3RHet 142409 142447 -2375060 + AT_rich Low_complexity Low_complexity 1 38 0 5 586 22 0 0 0 chr3RHet 143125 143147 -2374360 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 346 333 17 11 chr3RHet 143203 143379 -2374128 + Gypsy12_I LTR Gypsy 2949 3125 -2421 5 586 3516 163 171 0 chr3RHet 143793 144515 -2372992 - DMCR1A LINE CR1 -2257 2213 1368 5 586 2183 8 0 0 chr3RHet 144622 144865 -2372642 + DIVER2_I LTR Pao 3905 4147 0 5 586 3226 37 11 0 chr3RHet 144867 145246 -2372261 + DIVER2_LTR LTR Pao 3 385 0 5 586 4570 142 199 14 chr3RHet 145316 146783 -2370724 - DMRT1B LINE R1 0 5183 3445 5 586 704 161 140 13 chr3RHet 146771 146928 -2370579 - DMRT1B LINE R1 -2165 3018 2842 5 586 1406 164 72 0 chr3RHet 146949 147199 -2370308 - DMRT1B LINE R1 -2612 2571 2304 5 586 1818 19 0 10 chr3RHet 147230 147439 -2370068 - DIVER2_I LTR Pao -656 3491 3285 5 586 16214 112 83 64 chr3RHet 147434 150518 -2366989 - DIVER2_I LTR Pao -1004 3143 1 5 586 2964 33 69 6 chr3RHet 150518 150880 -2366627 - DIVER2_LTR LTR Pao 0 385 1 5 586 234 0 0 0 chr3RHet 151836 151862 -2365645 + (T)n Simple_repeat Simple_repeat 1 26 0 5 586 937 159 90 62 chr3RHet 152144 152500 -2365007 - PROTOP_A DNA P -10 1095 745 5 586 534 220 247 6 chr3RHet 152498 152676 -2364831 - PROTOP DNA P -2938 1542 1322 5 586 843 216 147 8 chr3RHet 152992 153258 -2364249 - PROTOP DNA P -3442 1038 736 5 586 261 0 0 0 chr3RHet 153600 153629 -2363878 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 586 4296 8 8 45 chr3RHet 153631 154158 -2363349 - DM176_LTR LTR Gypsy 0 507 1 5 586 55981 6 11 3 chr3RHet 154158 160527 -2356980 - DM176_I LTR Gypsy 0 6420 1 5 586 4294 10 8 45 chr3RHet 160527 161054 -2356453 - DM176_LTR LTR Gypsy 0 507 1 5 586 365 169 0 0 chr3RHet 161078 161143 -2356364 + Gypsy_I LTR Gypsy 5473 5537 -970 5 586 1008 69 27 20 chr3RHet 161316 161463 -2356044 + M4DM DNA Transib 1 148 -1287 5 586 27 29 0 0 chr3RHet 161662 161696 -2355811 + AT_rich Low_complexity Low_complexity 1 34 0 5 586 904 211 68 65 chr3RHet 162490 162814 -2354693 - Gypsy_LTR LTR Gypsy -157 325 1 5 586 826 202 6 0 chr3RHet 162817 162980 -2354527 - Gypsy_I LTR Gypsy -3 6504 6341 5 586 5844 193 19 1 chr3RHet 162985 164048 -2353459 - Gypsy_I LTR Gypsy -276 6231 5150 5 586 9117 64 32 2 chr3RHet 164032 165214 -2352293 + BS2 LINE Jockey 3504 4721 0 5 586 24 0 0 0 chr3RHet 165214 165238 -2352269 + AT_rich Low_complexity Low_complexity 1 24 0 5 586 250 156 0 22 chr3RHet 166587 166633 -2350874 + MAX_I LTR Pao 577 621 -7293 5 586 269 271 9 36 chr3RHet 167204 167315 -2350192 + MAX_I LTR Pao 1628 1735 -6179 5 586 1897 179 0 0 chr3RHet 167321 167633 -2349874 + MAX_I LTR Pao 2933 3244 -4670 5 586 1513 146 201 0 chr3RHet 167633 167987 -2349520 + MAX_I LTR Pao 3347 3771 -4143 5 586 287 263 11 0 chr3RHet 168023 168118 -2349389 - STALKER4_LTR LTR Gypsy -27 375 280 5 586 429 257 21 0 chr3RHet 168180 168320 -2349187 - STALKER4_LTR LTR Gypsy -27 375 233 5 586 3510 7 7 7 chr3RHet 168332 168746 -2348761 + DM297_LTR LTR Gypsy 1 414 0 5 586 43742 6 0 0 chr3RHet 168746 173788 -2343719 + DM297_I LTR Gypsy 1 5043 -1124 5 586 4024 14 0 0 chr3RHet 173774 174268 -2343239 + DM297_I LTR Gypsy 5674 6167 0 5 586 3523 5 7 7 chr3RHet 174268 174682 -2342825 + DM297_LTR LTR Gypsy 1 414 0 5 586 21279 5 0 0 chr3RHet 174682 177140 -2340367 + DM297_I LTR Gypsy 1 2459 -3708 5 586 412 0 0 0 chr3RHet 177142 177189 -2340318 + DM297_LTR LTR Gypsy 368 414 0 5 586 1099 149 100 77 chr3RHet 177189 177439 -2340068 - STALKER4_LTR LTR Gypsy -146 256 1 5 586 30070 57 57 7 chr3RHet 177439 181618 -2335889 - STALKER4_I LTR Gypsy 0 6530 2142 5 586 587 201 118 6 chr3RHet 181618 181788 -2335719 - Stalker2_I LTR Gypsy -6937 465 277 5 586 462 250 21 0 chr3RHet 182029 182169 -2335338 - STALKER4_LTR LTR Gypsy -27 375 233 5 586 610 223 12 35 chr3RHet 182273 182445 -2335062 - Gypsy2_LTR LTR Gypsy -183 170 3 5 586 1244 154 25 4 chr3RHet 182456 182691 -2334816 - STALKER4_LTR LTR Gypsy -147 255 16 5 586 2150 22 159 0 chr3RHet 182739 183016 -2334491 + Baggins1 LINE LOA 1 321 -5132 5 586 17704 58 78 4 chr3RHet 183006 186725 -2330782 + Baggins1 LINE LOA 473 4514 -939 5 586 5479 59 39 12 chr3RHet 186725 187707 -2329800 + PROTOP_B DNA P 1 1028 -77 5 586 7606 49 10 4 chr3RHet 187713 188654 -2328853 + Baggins1 LINE LOA 4508 5453 0 5 586 18013 45 108 5 chr3RHet 188658 192045 -2325462 + IVK_DM LINE I 1 3793 -1609 5 586 7456 45 52 5 chr3RHet 192043 193356 -2324151 + IVK_DM LINE I 4027 5402 0 5 586 967 178 158 14 chr3RHet 193365 193587 -2323920 + MAX_I LTR Pao 3794 4047 -3867 5 586 1662 204 79 22 chr3RHet 193588 193954 -2323553 + MAX_I LTR Pao 4716 5102 -2812 5 586 22 35 0 0 chr3RHet 193959 193988 -2323519 + AT_rich Low_complexity Low_complexity 1 29 0 5 586 32 26 0 0 chr3RHet 194016 194055 -2323452 + AT_rich Low_complexity Low_complexity 1 39 0 5 586 23 0 0 0 chr3RHet 194911 194934 -2322573 + AT_rich Low_complexity Low_complexity 1 23 0 5 586 42 20 0 0 chr3RHet 196145 196194 -2321313 + AT_rich Low_complexity Low_complexity 1 49 0 5 586 654 243 28 28 chr3RHet 196194 196372 -2321135 - BS2 LINE Jockey -2180 2541 2364 5 586 226 206 31 31 chr3RHet 197143 197208 -2320299 - T412LTR LTR LTR -48 433 369 5 586 1974 116 7 16 chr3RHet 197212 197567 -2319940 - DM412 LTR Gypsy -250 321 1 5 586 14019 55 8 0 chr3RHet 197569 199378 -2318129 - DM412 LTR Gypsy -349 6548 4725 5 586 15326 62 102 0 chr3RHet 199376 201519 -2315988 - DM412 LTR Gypsy -2336 4561 2201 5 586 2399 7 0 0 chr3RHet 201513 201783 -2315724 + FW_DM LINE Jockey 1926 2195 -2497 5 586 18265 23 3 2 chr3RHet 201782 203923 -2313584 + FW_DM LINE Jockey 2549 4691 -1 5 586 4239 164 62 43 chr3RHet 203920 205008 -2312499 - DM412 LTR Gypsy -4681 2216 1108 5 586 3632 159 43 26 chr3RHet 205026 206004 -2311503 - DM412 LTR Gypsy -6068 829 1 5 586 4518 41 86 3 chr3RHet 207742 208514 -2308993 - DMCR1A LINE CR1 -74 4396 3561 5 586 311 258 32 51 chr3RHet 208806 208978 -2308529 + BLASTOPIA_I LTR Gypsy 3575 3909 -1077 5 586 22 0 0 0 chr3RHet 210250 210272 -2307235 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 701 198 203 48 chr3RHet 210325 210532 -2306975 + MAX_I LTR Pao 2317 2555 -5359 5 586 863 188 53 0 chr3RHet 210509 210679 -2306828 + MAX_I LTR Pao 2933 3111 -4803 5 586 4319 160 201 7 chr3RHet 210684 211958 -2305549 + MAX_I LTR Pao 3598 5170 -2744 5 586 2002 195 246 3 chr3RHet 211985 212562 -2304945 + MAX_I LTR Pao 6973 7689 -225 5 586 1586 73 5 5 chr3RHet 212884 213105 -2304402 - DMTOM1_LTR LTR Gypsy 0 410 190 5 586 47 0 0 0 chr3RHet 213522 213569 -2303938 + AT_rich Low_complexity Low_complexity 1 47 0 5 586 371 321 58 46 chr3RHet 214564 214886 -2302621 + Gypsy3_I LTR Gypsy 1218 1556 -4579 5 586 785 340 52 48 chr3RHet 216377 216815 -2300692 + Gypsy4_I LTR Gypsy 2320 2812 -3609 5 586 1601 23 19 0 chr3RHet 216815 217029 -2300478 + TLD2 Unknown Unknown 1 218 0 5 586 785 340 52 48 chr3RHet 217029 217671 -2299836 + Gypsy4_I LTR Gypsy 2813 3538 -2883 5 586 243 212 29 29 chr3RHet 218025 218093 -2299414 + Gypsy4_I LTR Gypsy 4324 4391 -1897 5 586 24 96 0 0 chr3RHet 219692 219765 -2297742 + AT_rich Low_complexity Low_complexity 1 73 0 5 586 3188 43 10 0 chr3RHet 219860 220254 -2297253 + S2_DM DNA Tc1 549 946 -789 5 586 620 113 562 13 chr3RHet 220265 220484 -2297023 - IDEFIX_LTR LTR Gypsy -253 341 2 5 586 10047 144 52 10 chr3RHet 220494 222362 -2295145 - IDEFIX_I LTR Gypsy -453 5175 3229 5 586 8240 98 35 2 chr3RHet 222363 223524 -2293983 - IDEFIX_I LTR Gypsy -2792 2836 1637 5 586 329 175 0 0 chr3RHet 223545 223602 -2293905 - IDEFIX_I LTR Gypsy -4461 1167 1111 5 586 3937 191 25 56 chr3RHet 223600 224455 -2293052 - IDEFIX_I LTR Gypsy -4800 828 1 5 586 3135 42 66 7 chr3RHet 224563 225157 -2292350 + TRANSIB1 DNA Transib 1 629 -2385 5 586 1935 62 68 18 chr3RHet 225142 225169 -2292338 + TRANSIB1 DNA Transib 2720 2746 -268 5 586 180 0 0 0 chr3RHet 225169 225189 -2292318 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 5 586 1935 62 68 18 chr3RHet 225189 225442 -2292065 + TRANSIB1 DNA Transib 2747 3012 -2 5 586 3787 97 15 51 chr3RHet 225830 226441 -2291066 - IDEFIX_LTR LTR Gypsy 0 594 6 5 586 262 133 0 22 chr3RHet 226511 226557 -2290950 + MAX_I LTR Pao 577 621 -7293 5 586 37 39 0 0 chr3RHet 227042 227093 -2290414 + AT_rich Low_complexity Low_complexity 1 51 0 5 586 46 72 0 23 chr3RHet 227491 227619 -2289888 + AT_rich Low_complexity Low_complexity 1 125 0 5 586 22 70 0 0 chr3RHet 227968 228011 -2289496 + AT_rich Low_complexity Low_complexity 1 43 0 5 586 384 250 67 58 chr3RHet 228108 228390 -2289117 + MAX_I LTR Pao 1353 1754 -6160 5 586 1970 177 0 0 chr3RHet 228426 228742 -2288765 + MAX_I LTR Pao 2933 3248 -4666 5 586 2617 142 50 15 chr3RHet 228775 229233 -2288274 + MAX_I LTR Pao 3349 3822 -4092 5 586 1512 219 23 0 chr3RHet 229241 229547 -2287960 + MAX_I LTR Pao 4561 4873 -3041 5 586 610 191 449 6 chr3RHet 229553 229731 -2287776 + MAX_I LTR Pao 5297 5553 -2361 5 586 639 158 430 17 chr3RHet 229746 229925 -2287582 + MAX_I LTR Pao 5713 5965 -1949 5 586 2542 100 112 140 chr3RHet 229942 230548 -2286959 + DNAREP1_DM LINE Penelope 6 594 0 5 586 3437 175 86 12 chr3RHet 230546 231207 -2286300 + MAX_I LTR Pao 5997 6706 -1208 5 586 28 48 0 0 chr3RHet 231300 231342 -2286165 + AT_rich Low_complexity Low_complexity 1 42 0 5 586 2822 76 29 60 chr3RHet 231736 232183 -2285324 + DMCR1A LINE CR1 7 439 -4031 5 586 14500 54 32 0 chr3RHet 232180 234007 -2283500 + DMRT1A LINE R1 1622 3507 -1676 5 586 10715 56 6 6 chr3RHet 234002 235345 -2282162 + DMRT1A LINE R1 3830 5172 -11 5 586 11657 36 31 7 chr3RHet 235338 236750 -2280757 + DMCR1A LINE CR1 427 1872 -2598 5 586 1528 98 244 0 chr3RHet 236761 237003 -2280504 + DMCR1A LINE CR1 3220 3520 -950 5 586 2737 48 139 2 chr3RHet 236996 237506 -2280001 + DMCR1A LINE CR1 3655 4234 -236 5 586 825 88 18 0 chr3RHet 237508 237622 -2279885 + DMCR1A LINE CR1 4353 4468 -2 5 586 15759 30 63 16 chr3RHet 237625 239926 -2277581 - Transib5 DNA Transib -591 2410 1 5 586 5331 64 30 7 chr3RHet 239926 240633 -2276874 + DMCR1A LINE CR1 3748 4470 0 5 586 21 0 0 0 chr3RHet 241236 241257 -2276250 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 404 173 53 0 chr3RHet 241954 242029 -2275478 + DNAREP1_DM LINE Penelope 1 79 -515 5 586 22 0 0 0 chr3RHet 242029 242051 -2275456 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 538 148 198 9 chr3RHet 242159 242371 -2275136 + DNAREP1_DM LINE Penelope 340 591 -3 5 586 21 0 0 0 chr3RHet 242783 242804 -2274703 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 25 65 0 0 chr3RHet 242856 242902 -2274605 + AT_rich Low_complexity Low_complexity 1 46 0 5 586 1183 223 174 47 chr3RHet 242995 243492 -2274015 - DNAREP1_DM LINE Penelope -25 569 10 5 586 1182 189 97 60 chr3RHet 243613 243995 -2273512 - Gypsy_LTR LTR Gypsy -86 396 1 5 586 9627 170 127 5 chr3RHet 243996 246338 -2271169 - Gypsy_I LTR Gypsy -2 6419 3719 5 586 21 0 0 0 chr3RHet 246671 246692 -2270815 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 25 65 0 0 chr3RHet 246744 246790 -2270717 + AT_rich Low_complexity Low_complexity 1 46 0 5 586 1183 223 174 47 chr3RHet 246883 247380 -2270127 - DNAREP1_DM LINE Penelope -25 569 10 5 586 1365 202 37 57 chr3RHet 247501 247905 -2269602 - Gypsy_LTR LTR Gypsy -86 396 1 5 586 9627 177 95 5 chr3RHet 247906 250248 -2267259 - Gypsy_I LTR Gypsy -2 6419 3719 5 586 21 0 0 0 chr3RHet 250581 250602 -2266905 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 25 65 0 0 chr3RHet 250654 250700 -2266807 + AT_rich Low_complexity Low_complexity 1 46 0 5 586 1183 223 174 47 chr3RHet 250793 251290 -2266217 - DNAREP1_DM LINE Penelope -25 569 10 5 586 1182 189 97 60 chr3RHet 251411 251793 -2265714 - Gypsy_LTR LTR Gypsy -86 396 1 5 586 837 201 6 0 chr3RHet 251794 251958 -2265549 - Gypsy_I LTR Gypsy -2 6505 6341 5 586 2111 214 50 6 chr3RHet 251963 252443 -2265064 - Gypsy_I LTR Gypsy -276 6231 5731 5 586 9627 161 55 6 chr3RHet 252441 254199 -2263308 - Gypsy_I LTR Gypsy -1553 5969 3936 5 586 727 336 41 26 chr3RHet 254634 255099 -2262408 - NOMAD_I LTR Gypsy 0 6572 6101 5 586 310 235 0 0 chr3RHet 255743 255811 -2261696 - NOMAD_I LTR Gypsy -561 6011 5944 5 586 336 240 0 0 chr3RHet 256286 256361 -2261146 - NOMAD_I LTR Gypsy -1017 5555 5481 5 586 5143 308 23 15 chr3RHet 256381 258133 -2259374 - NOMAD_I LTR Gypsy -1342 5230 3465 5 586 237 229 0 0 chr3RHet 258171 258219 -2259288 - NOMAD_I LTR Gypsy -3330 3242 3195 5 586 543 351 27 24 chr3RHet 258235 258609 -2258898 - NOMAD_I LTR Gypsy -97 6475 6101 5 586 310 235 0 0 chr3RHet 259253 259321 -2258186 - NOMAD_I LTR Gypsy -561 6011 5944 5 586 336 240 0 0 chr3RHet 259796 259871 -2257636 - NOMAD_I LTR Gypsy -1017 5555 5481 5 586 5143 308 23 15 chr3RHet 259891 261643 -2255864 - NOMAD_I LTR Gypsy -1342 5230 3465 5 73 4169 320 59 51 chr3RHet 261681 264357 -2253150 - NOMAD_I LTR Gypsy -3330 3242 547 5 587 1334 97 0 6 chr3RHet 264844 265021 -2252486 + G5_DM LINE Jockey 6 181 -4675 5 587 11258 45 58 0 chr3RHet 265012 266402 -2251105 + G5_DM LINE Jockey 398 1868 -2988 5 587 2974 31 58 0 chr3RHet 266401 266919 -2250588 + G5_DM LINE Jockey 3363 3910 -946 5 587 4500 33 36 20 chr3RHet 266917 267468 -2250039 + G5_DM LINE Jockey 4095 4654 -202 5 587 6821 22 0 0 chr3RHet 267468 268253 -2249254 + PROTOP_A DNA P 1 785 -320 5 587 210 193 0 0 chr3RHet 268419 268476 -2249031 + T-rich Low_complexity Low_complexity 1 57 0 5 587 698 208 34 14 chr3RHet 268504 268650 -2248857 - NOMAD_I LTR Gypsy -5877 695 547 5 587 1334 97 0 6 chr3RHet 269127 269304 -2248203 + G5_DM LINE Jockey 6 181 -4675 5 587 3164 67 0 0 chr3RHet 269295 269686 -2247821 + G5_DM LINE Jockey 398 788 -4068 5 587 1119 187 115 59 chr3RHet 269737 270112 -2247395 - Gypsy_LTR LTR Gypsy -86 396 1 5 587 1703 282 108 37 chr3RHet 270510 271436 -2246071 + Invader4_I LTR Gypsy 202 1199 -1987 5 587 1381 161 2 3 chr3RHet 271577 271868 -2245639 - DOC4_DM LINE Jockey -756 2035 1870 5 587 232 252 50 20 chr3RHet 271900 272001 -2245506 - MAX_I LTR Pao -7500 414 311 5 587 331 173 38 51 chr3RHet 272097 272176 -2245331 - MAX_LTR LTR Pao -131 190 113 5 587 1300 177 115 0 chr3RHet 272201 272461 -2245046 - MAX_I LTR Pao -239 7675 7386 5 587 5189 43 65 13 chr3RHet 272822 273498 -2244009 + DOC4_DM LINE Jockey 2081 2791 0 5 587 5405 82 173 6 chr3RHet 273547 274469 -2243038 - DMCR1A LINE CR1 -177 4293 3183 5 587 977 42 0 0 chr3RHet 274469 274587 -2242920 - DMCR1A LINE CR1 -1389 3081 2964 5 587 11781 64 52 11 chr3RHet 274581 276166 -2241341 - DMCR1A LINE CR1 -1633 2837 1188 5 587 600 114 28 9 chr3RHet 276153 276259 -2241248 - Gypsy9_LTR LTR Gypsy -14 322 215 5 587 913 37 0 0 chr3RHet 276256 276363 -2241144 - Gypsy9_I LTR Gypsy -6 4671 4565 5 587 3407 33 33 0 chr3RHet 276382 276801 -2240706 - Transib5 DNA Transib 0 3001 2569 5 587 1425 46 0 0 chr3RHet 276824 276998 -2240509 - Transib5 DNA Transib -2827 174 1 5 587 8786 59 53 14 chr3RHet 277008 278210 -2239297 - Gypsy9_I LTR Gypsy -185 4492 3244 5 587 6967 217 113 94 chr3RHet 278244 282071 -2235436 - Gypsy9_I LTR Gypsy -1536 4752 164 5 587 2467 64 57 20 chr3RHet 282065 282416 -2235091 - DMCR1A LINE CR1 -3400 1070 707 5 587 694 323 11 12 chr3RHet 282419 282705 -2234802 + Invader1_I LTR Gypsy 1606 1862 -1324 5 587 11878 97 6 1 chr3RHet 282723 284451 -2233056 - S_DM DNA Tc1 0 1736 1 5 587 3762 12 2 0 chr3RHet 284453 284875 -2232632 + Invader1_LTR LTR Gypsy 1 423 0 5 587 1971 25 8 43 chr3RHet 284899 285154 -2232353 - Gypsy4_LTR LTR Gypsy -41 246 1 5 587 14053 13 25 1 chr3RHet 285154 286781 -2230726 - Gypsy4_I LTR Gypsy 0 6288 4624 5 587 37156 16 17 3 chr3RHet 286780 291077 -2226430 - Gypsy4_I LTR Gypsy -1929 4359 1 5 587 2250 39 7 37 chr3RHet 291077 291373 -2226134 - Gypsy4_LTR LTR Gypsy 0 287 1 5 587 907 304 46 6 chr3RHet 291392 291743 -2225764 + Invader1_I LTR Gypsy 1900 2264 -922 5 587 1408 64 357 6 chr3RHet 292085 292423 -2225084 - TRANSIB3 DNA Transib 0 2883 2426 5 587 6968 60 24 8 chr3RHet 292407 293358 -2224149 - TRANSIB3 DNA Transib -1917 966 1 5 587 923 176 91 0 chr3RHet 293379 293566 -2223941 + MDG1_I LTR Gypsy 4002 4205 -2391 5 587 1986 236 146 27 chr3RHet 293566 294388 -2223119 + DM412 LTR Gypsy 4688 5607 -1290 5 587 687 136 122 0 chr3RHet 294597 294744 -2222763 + Stalker2_I LTR Gypsy 5763 5927 -1475 5 587 967 220 234 14 chr3RHet 294750 295234 -2222273 + DM412 LTR Gypsy 5701 6590 -307 5 587 199 179 15 15 chr3RHet 295280 295348 -2222159 + (TAAA)n Simple_repeat Simple_repeat 3 70 0 5 587 2888 47 239 5 chr3RHet 295368 296106 -2221401 + PROTOP_B DNA P 243 1153 0 5 587 579 238 185 16 chr3RHet 296454 296638 -2220869 - Gypsy8_I LTR Gypsy -3404 943 729 5 587 1014 139 58 0 chr3RHet 296638 296811 -2220696 - Gypsy8_I LTR Gypsy -3786 561 379 5 587 759 194 0 0 chr3RHet 297266 297400 -2220107 - Gypsy8_I LTR Gypsy -3984 363 230 5 587 447 327 104 11 chr3RHet 297595 297873 -2219634 - OSVALDO_I LTR Gypsy -5915 738 435 5 587 385 222 172 7 chr3RHet 298803 298948 -2218559 - DNAREP1_DM LINE Penelope -294 300 132 5 587 291 206 29 14 chr3RHet 298964 299033 -2218474 - DNAREP1_DM LINE Penelope -514 80 11 5 587 22 80 0 0 chr3RHet 299543 299593 -2217914 + AT_rich Low_complexity Low_complexity 1 50 0 5 587 1921 101 210 0 chr3RHet 299996 300334 -2217173 + DNAREP1_DM LINE Penelope 160 568 -26 5 587 1638 140 89 42 chr3RHet 300333 300736 -2216771 - DNAREP1_DM LINE Penelope -172 422 1 5 587 250 321 48 0 chr3RHet 301954 302038 -2215469 - G5A_DM LINE Jockey -853 1988 1901 5 587 226 326 87 46 chr3RHet 302151 302347 -2215160 - G2_DM LINE Jockey -1069 2033 1830 5 587 802 129 109 23 chr3RHet 303014 303188 -2214319 + DMRT1C LINE R1 5253 5441 -2 5 587 47 0 0 0 chr3RHet 303655 303702 -2213805 + AT_rich Low_complexity Low_complexity 1 47 0 5 587 363 307 78 62 chr3RHet 304615 305062 -2212445 + Gypsy3_I LTR Gypsy 708 1449 -4728 5 587 894 337 63 44 chr3RHet 306415 306871 -2210636 + BURDOCK_I LTR Gypsy 2255 2798 -3062 5 587 1078 43 164 21 chr3RHet 306871 307060 -2210447 + TLD2 Unknown Unknown 1 216 -2 5 587 894 337 63 44 chr3RHet 307060 307699 -2209808 + BURDOCK_I LTR Gypsy 2799 3562 -2298 5 587 249 310 43 43 chr3RHet 308214 308376 -2209131 + GTWIN_I LTR Gypsy 4123 4284 -2137 5 587 259 159 73 73 chr3RHet 308554 308622 -2208885 + Gypsy4_I LTR Gypsy 4324 4391 -1897 5 587 46 0 0 0 chr3RHet 310867 310913 -2206594 + AT_rich Low_complexity Low_complexity 1 46 0 5 587 3217 128 18 18 chr3RHet 310947 311498 -2206009 + DOC LINE Jockey 4147 4697 -28 5 587 434 37 0 0 chr3RHet 311516 311570 -2205937 - DNAREP1_DM LINE Penelope -360 234 181 5 587 321 75 0 0 chr3RHet 311619 311659 -2205848 + DNAREP1_DM LINE Penelope 445 484 -110 5 587 9638 48 39 11 chr3RHet 311662 312918 -2204589 + DMCR1A LINE CR1 1547 2837 -1633 5 587 952 42 0 0 chr3RHet 312912 313030 -2204477 + DMCR1A LINE CR1 2964 3081 -1389 5 587 8135 65 75 7 chr3RHet 313030 314204 -2203303 + DMCR1A LINE CR1 3183 4470 0 5 587 343 57 0 70 chr3RHet 314210 314267 -2203240 + DNAREP1_DM LINE Penelope 508 560 -34 5 587 32 43 0 0 chr3RHet 314286 314332 -2203175 + AT_rich Low_complexity Low_complexity 1 46 0 5 587 336 366 12 4 chr3RHet 314856 315100 -2202407 - BURDOCK_I LTR Gypsy -4878 982 737 5 587 29 28 0 0 chr3RHet 316042 316078 -2201429 + AT_rich Low_complexity Low_complexity 1 36 0 5 587 5454 334 22 22 chr3RHet 368308 372455 -2145052 + GTWIN_I LTR Gypsy 1202 5318 -1694 5 587 3186 132 18 0 chr3RHet 373613 374127 -2143380 + IDEFIX_I LTR Gypsy 1971 2493 -3135 5 587 8919 116 96 6 chr3RHet 374146 376908 -2140599 + IDEFIX_I LTR Gypsy 2616 5626 -2 5 587 1402 121 107 13 chr3RHet 376907 377217 -2140290 + IDEFIX_LTR LTR Gypsy 3 341 -253 5 587 6918 52 11 12 chr3RHet 377218 378186 -2139321 - S2_DM DNA Tc1 -767 968 2 5 587 387 81 16 0 chr3RHet 378186 378245 -2139262 + BARI1 DNA Tc1 36 95 -1655 5 587 260 149 0 0 chr3RHet 378245 378292 -2139215 + BARI1 DNA Tc1 1637 1683 -67 5 587 3157 42 0 0 chr3RHet 378289 378693 -2138814 + DMTOM1_LTR LTR Gypsy 7 410 0 5 587 1710 199 252 4 chr3RHet 378996 379560 -2137947 - MAX_I LTR Pao -238 7676 6973 5 587 2373 164 162 5 chr3RHet 379577 380877 -2136630 - MAX_I LTR Pao -2713 5201 3601 5 587 873 165 53 0 chr3RHet 380877 381047 -2136460 - MAX_I LTR Pao -4803 3111 2933 5 587 515 207 202 49 chr3RHet 381021 381224 -2136283 - MAX_I LTR Pao -5356 2558 2325 5 587 24 0 0 0 chr3RHet 381241 381265 -2136242 + AT_rich Low_complexity Low_complexity 1 24 0 5 587 231 156 0 22 chr3RHet 382034 382080 -2135427 - MAX_I LTR Pao -7293 621 577 5 587 248 0 31 0 chr3RHet 383130 383162 -2134345 + (CAATG)n Simple_repeat Simple_repeat 2 34 0 5 587 830 165 11 5 chr3RHet 383385 383574 -2133933 + DNAREP1_DM LINE Penelope 118 307 -287 5 587 1106 132 16 10 chr3RHet 383573 383774 -2133733 + DNAREP1_DM LINE Penelope 111 441 -153 5 587 7238 179 23 5 chr3RHet 383812 385242 -2132265 + IDEFIX_I LTR Gypsy 32 1487 -4141 5 587 2238 97 18 3 chr3RHet 385244 385567 -2131940 + IDEFIX_I LTR Gypsy 1726 2053 -3575 5 587 939 9 0 0 chr3RHet 385567 385675 -2131832 - PROTOP_A DNA P 0 1105 998 5 587 2574 3 0 0 chr3RHet 385674 385979 -2131528 - G2_DM LINE Jockey -4 3098 2794 5 587 8028 24 0 7 chr3RHet 385970 386981 -2130526 - PROTOP_A DNA P -101 1004 1 5 587 2744 129 20 0 chr3RHet 386981 387422 -2130085 + IDEFIX_I LTR Gypsy 2044 2493 -3135 5 587 750 97 0 26 chr3RHet 387441 387558 -2129949 + IDEFIX_I LTR Gypsy 2616 2729 -2899 5 587 3427 5 0 2 chr3RHet 387558 387961 -2129546 + STALKER4_LTR LTR Gypsy 1 402 0 5 587 300 25 0 24 chr3RHet 387961 387989 -2129518 + STALKER4_I LTR Gypsy 1 27 -6503 5 587 289 96 0 37 chr3RHet 387989 388043 -2129464 + STALKER4_I LTR Gypsy 1 52 -7350 5 587 23929 36 20 10 chr3RHet 388256 391536 -2125971 + STALKER4_I LTR Gypsy 242 3620 -2910 5 73 14680 21 7 4 chr3RHet 391519 393355 -2124152 + STALKER4_I LTR Gypsy 4658 7402 0 5 588 3578 5 0 2 chr3RHet 393355 393758 -2123749 + STALKER4_LTR LTR Gypsy 1 402 0 5 588 2014 151 0 9 chr3RHet 393782 394130 -2123377 + IDEFIX_I LTR Gypsy 2722 3066 -2562 5 588 2126 134 33 44 chr3RHet 394133 394561 -2122946 + Stalker2_LTR LTR Gypsy 1 423 -1 5 588 248 103 26 0 chr3RHet 394552 394578 -2122929 + STALKER4_I LTR Gypsy 1 27 -6503 5 588 306 105 0 50 chr3RHet 394578 394638 -2122869 + Stalker2_I LTR Gypsy 1 57 -7345 5 588 2596 146 47 8 chr3RHet 394838 395429 -2122078 + Stalker2_I LTR Gypsy 242 908 -5622 5 588 562 303 18 18 chr3RHet 396241 396520 -2120987 + BLOOD_I LTR Gypsy 1984 2262 -4351 5 588 3263 3 0 0 chr3RHet 396521 396888 -2120619 + ROVER-LTR_DM LTR Gypsy 1 367 0 5 588 55004 4 0 1 chr3RHet 396888 403624 -2113883 + ROVER-I_DM LTR Gypsy 1 6584 0 5 588 3291 0 0 0 chr3RHet 403624 403991 -2113516 + ROVER-LTR_DM LTR Gypsy 1 367 0 5 588 11199 263 40 15 chr3RHet 403996 407960 -2109547 + TABOR_I LTR Gypsy 2162 6224 -372 5 588 44 63 0 0 chr3RHet 408192 408271 -2109236 + AT_rich Low_complexity Low_complexity 1 79 0 5 588 192 167 0 0 chr3RHet 408272 408320 -2109187 + A-rich Low_complexity Low_complexity 1 48 0 5 588 351 0 0 0 chr3RHet 408326 408366 -2109141 + STALKER4_I LTR Gypsy 6491 6530 0 5 588 2075 121 66 36 chr3RHet 408366 408777 -2108730 + Stalker2_LTR LTR Gypsy 1 423 -1 5 588 6716 112 118 1 chr3RHet 408788 410583 -2106924 + IDEFIX_I LTR Gypsy 3060 5065 -563 5 588 526 138 11 0 chr3RHet 410599 410693 -2106814 + IDEFIX_I LTR Gypsy 5392 5486 -142 5 588 275 153 14 0 chr3RHet 410679 410751 -2106756 + IDEFIX_LTR LTR Gypsy 522 594 0 5 588 2945 63 0 8 chr3RHet 411130 411612 -2105895 + DMRT1C LINE R1 3850 4365 -1078 5 588 1813 78 12 0 chr3RHet 411610 411854 -2105653 + DMRT1C LINE R1 5196 5442 -1 5 588 715 214 126 93 chr3RHet 411879 412235 -2105272 + HOBO DNA hAT 2523 2890 -126 5 588 383 179 95 24 chr3RHet 412285 412411 -2105096 + DM297_LTR LTR Gypsy 280 414 0 5 588 28 48 0 0 chr3RHet 412600 412642 -2104865 + AT_rich Low_complexity Low_complexity 1 42 0 5 588 647 313 54 14 chr3RHet 413243 413538 -2103969 + OSVALDO_I LTR Gypsy 415 721 -5932 5 588 13203 67 110 14 chr3RHet 413681 416241 -2101266 + DOC4_DM LINE Jockey 1 2791 0 5 588 614 206 23 52 chr3RHet 416433 416607 -2100900 - Gypsy8_I LTR Gypsy -4118 229 61 5 588 1305 147 27 87 chr3RHet 416737 417035 -2100472 - Gypsy8_LTR LTR Gypsy -24 280 1 5 588 919 218 123 15 chr3RHet 417035 417431 -2100076 + Gypsy8_I LTR Gypsy 1039 1220 -3127 5 588 505 191 0 0 chr3RHet 417439 417533 -2099974 + Gypsy8_I LTR Gypsy 1501 1594 -2753 5 588 1297 192 260 26 chr3RHet 417539 418031 -2099476 + Gypsy8_I LTR Gypsy 1836 2347 -2000 5 588 31 26 0 0 chr3RHet 418292 418330 -2099177 + AT_rich Low_complexity Low_complexity 1 38 0 5 588 579 154 164 0 chr3RHet 418347 418457 -2099050 + DNAREP1_DM LINE Penelope 312 439 -155 5 588 1480 69 15 0 chr3RHet 419263 419465 -2098042 + BARI1 DNA Tc1 1487 1691 -59 5 588 236 257 0 13 chr3RHet 420324 420399 -2097108 + DMCR1A LINE CR1 6 79 -4391 5 588 241 295 0 0 chr3RHet 422487 422565 -2094942 + ZAM_I LTR Gypsy 4297 4374 -3116 5 588 316 281 56 39 chr3RHet 423109 423287 -2094220 + TIRANT_I LTR Gypsy 5560 5740 -1952 5 588 1463 163 147 0 chr3RHet 423307 423626 -2093881 + Gypsy12A_LTR LTR Gypsy 30 395 -1885 5 588 1360 213 69 80 chr3RHet 423651 424289 -2093218 + Gypsy12A_LTR LTR Gypsy 1180 1810 -470 5 588 21 0 0 0 chr3RHet 424313 424334 -2093173 + AT_rich Low_complexity Low_complexity 1 21 0 5 588 1520 119 101 38 chr3RHet 424344 424632 -2092875 + Gypsy12A_LTR LTR Gypsy 1805 2110 -170 5 588 698 154 110 0 chr3RHet 424631 424767 -2092740 + DNAREP1_DM LINE Penelope 444 594 0 5 588 286 287 77 0 chr3RHet 424640 424783 -2092724 - P_DG DNA P -3 2885 2732 5 588 4908 19 0 8 chr3RHet 425349 425939 -2091568 - DOC LINE Jockey -1 4724 4140 5 588 23943 5 0 1 chr3RHet 425911 428596 -2088911 - DOC LINE Jockey -919 3806 1124 5 588 26 82 0 0 chr3RHet 430476 430537 -2086970 + AT_rich Low_complexity Low_complexity 1 61 0 5 588 601 177 31 31 chr3RHet 432726 432889 -2084618 - DM297_LTR LTR Gypsy -127 287 125 5 588 4630 108 172 66 chr3RHet 433190 434109 -2083398 + DMRT1C LINE R1 2110 3125 -2318 5 588 795 101 69 8 chr3RHet 434092 434222 -2083285 + DMRT1C LINE R1 3709 3846 -1597 5 588 2831 103 68 2 chr3RHet 434209 434638 -2082869 + DMRT1C LINE R1 4144 4600 -843 5 588 317 159 0 45 chr3RHet 435809 435875 -2081632 - DNAREP1_DM LINE Penelope -531 63 1 5 588 29 0 0 0 chr3RHet 435875 435904 -2081603 + AT_rich Low_complexity Low_complexity 1 29 0 5 588 589 292 132 47 chr3RHet 435984 437289 -2080218 - IDEFIX_I LTR Gypsy -1857 4106 2426 5 588 1017 311 95 20 chr3RHet 437329 437927 -2079580 - TOM_I LTR Gypsy -3451 2661 2019 5 588 1670 145 60 16 chr3RHet 438225 438541 -2078966 - FW_DM LINE Jockey -8 4684 4355 5 588 1962 47 8 45 chr3RHet 438656 438924 -2078583 - BLOOD_LTR LTR Gypsy -141 258 1 5 588 48253 11 23 11 chr3RHet 438924 445367 -2072140 - BLOOD_I LTR Gypsy 0 6613 32 5 588 1984 43 8 45 chr3RHet 445495 445763 -2071744 - BLOOD_LTR LTR Gypsy -141 258 1 5 588 24903 9 30 1 chr3RHet 445763 448700 -2068807 - BLOOD_I LTR Gypsy 0 6613 3592 5 588 8061 10 0 2 chr3RHet 520792 521685 -1995822 + Gypsy2_I LTR Gypsy 5070 5960 -175 5 588 1392 24 0 0 chr3RHet 521728 521894 -1995613 + Gypsy2_I LTR Gypsy 5966 6131 -4 5 588 3231 11 0 0 chr3RHet 521902 522255 -1995252 + Gypsy2_LTR LTR Gypsy 1 353 0 5 588 282 255 103 48 chr3RHet 522255 522420 -1995087 - DM412 LTR Gypsy -28 6869 6696 5 588 192 40 0 0 chr3RHet 522467 522492 -1995015 + (TTA)n Simple_repeat Simple_repeat 3 27 0 5 73 8654 175 12 1 chr3RHet 522503 524532 -1992975 - DM412 LTR Gypsy -600 6297 4211 5 589 2850 265 86 13 chr3RHet 524513 525580 -1991927 - DM412 LTR Gypsy -2885 4012 2868 5 589 241 161 0 82 chr3RHet 525563 525624 -1991883 - Gypsy11_I LTR Gypsy -1043 2481 2426 5 589 11942 14 29 6 chr3RHet 525632 527352 -1990155 + Gypsy2_I LTR Gypsy 4201 5960 -175 5 589 260 316 0 0 chr3RHet 527319 527395 -1990112 + Gypsy3_I LTR Gypsy 5930 6005 -172 5 589 1055 0 0 0 chr3RHet 527396 527509 -1989998 + Gypsy2_LTR LTR Gypsy 241 353 0 5 589 282 255 103 48 chr3RHet 527509 527674 -1989833 - DM412 LTR Gypsy -28 6869 6696 5 589 40 0 0 0 chr3RHet 527705 527745 -1989762 + AT_rich Low_complexity Low_complexity 1 40 0 5 589 8645 173 13 2 chr3RHet 527756 529785 -1987722 - DM412 LTR Gypsy -600 6297 4211 5 589 3438 270 95 33 chr3RHet 529774 531427 -1986080 - STALKER4_I LTR Gypsy -2903 3627 1873 5 589 25 65 0 0 chr3RHet 531520 531566 -1985941 + AT_rich Low_complexity Low_complexity 1 46 0 5 589 483 238 55 60 chr3RHet 531706 531907 -1985600 - DM412 LTR Gypsy -5470 1427 1228 5 589 559 178 63 78 chr3RHet 532030 532339 -1985168 - Gypsy11_I LTR Gypsy -5711 885 593 5 589 226 150 0 0 chr3RHet 532417 532457 -1985050 - Gypsy11_I LTR Gypsy -6051 545 506 5 589 391 162 264 9 chr3RHet 532458 532564 -1984943 - MDG1_I LTR Gypsy -6012 584 452 5 589 46 0 0 0 chr3RHet 532961 533007 -1984500 + AT_rich Low_complexity Low_complexity 1 46 0 5 589 2183 122 30 8 chr3RHet 533021 533384 -1984123 - MDG1_I LTR Gypsy -6136 460 90 5 589 339 279 16 68 chr3RHet 533471 533663 -1983844 - Gypsy11_LTR LTR Gypsy -171 281 100 5 589 332 239 110 42 chr3RHet 533558 533676 -1983831 - T412LTR LTR LTR -296 185 60 5 589 9404 32 1 2 chr3RHet 533713 534819 -1982688 - PROTOP_A DNA P 0 1105 1 5 589 2002 47 8 45 chr3RHet 534865 535133 -1982374 + BLOOD_LTR LTR Gypsy 1 258 -141 5 589 55910 13 26 9 chr3RHet 535248 541752 -1975755 + BLOOD_I LTR Gypsy 1 6613 0 5 589 906 44 35 0 chr3RHet 541752 541866 -1975641 + BLOOD_LTR LTR Gypsy 1 118 -281 5 589 5099 144 24 0 chr3RHet 541849 542656 -1974851 - NINJA_I LTR Pao -3587 2424 1599 5 589 1592 27 38 12 chr3RHet 542653 542912 -1974595 + BLOOD_I LTR Gypsy 6277 6613 0 5 589 2025 43 8 45 chr3RHet 542912 543180 -1974327 + BLOOD_LTR LTR Gypsy 1 258 -141 5 589 2610 32 3 0 chr3RHet 543310 543625 -1973882 + PROTOP DNA P 214 529 -3951 5 589 6318 110 104 0 chr3RHet 543626 544616 -1972891 - NINJA_I LTR Pao -1075 4936 3844 5 589 2922 68 83 0 chr3RHet 544615 545014 -1972493 - NINJA_I LTR Pao -2731 3280 2849 5 589 8428 121 52 0 chr3RHet 545013 546295 -1971212 - NINJA_I LTR Pao -3473 2538 1191 5 589 413 68 16 33 chr3RHet 547612 547673 -1969834 + DOC3_DM LINE Jockey 3663 3722 -1018 5 589 11717 79 42 4 chr3RHet 547668 549386 -1968121 - DOC3_DM LINE Jockey -22 4771 2960 5 589 5586 44 38 0 chr3RHet 549390 550072 -1967435 - DOC3_DM LINE Jockey -2267 2473 1766 5 589 6876 36 7 0 chr3RHet 550061 550885 -1966622 - DMRT1B LINE R1 0 5183 4354 5 589 10284 41 45 7 chr3RHet 550880 552155 -1965352 - DMRT1B LINE R1 -1285 3898 2575 5 589 8841 41 30 5 chr3RHet 552151 553270 -1964237 - DOC3_DM LINE Jockey -2951 1789 642 5 589 6530 31 26 1 chr3RHet 553270 554073 -1963434 + PROTOP DNA P 1 823 -3657 5 589 5993 16 0 0 chr3RHet 554068 554747 -1962760 + PROTOP DNA P 3802 4480 0 5 589 4690 49 51 10 chr3RHet 554747 555369 -1962138 - DOC3_DM LINE Jockey -4092 648 1 5 589 4029 95 50 7 chr3RHet 555502 556096 -1961411 - R1-2_DM LINE R1 -683 2533 1914 5 589 2137 103 0 0 chr3RHet 556099 556401 -1961106 - R1-2_DM LINE R1 -1410 1806 1505 5 589 575 160 0 0 chr3RHet 556402 556502 -1961005 - R1-2_DM LINE R1 -3083 133 34 5 589 440 230 0 0 chr3RHet 556682 556782 -1960725 - R1_DM LINE R1 -4893 463 364 5 589 1877 171 83 40 chr3RHet 556777 557296 -1960211 - DNAREP1_DM LINE Penelope -53 541 1 5 589 21 0 0 0 chr3RHet 558287 558308 -1959199 + AT_rich Low_complexity Low_complexity 1 21 0 5 589 2451 134 113 22 chr3RHet 558416 558956 -1958551 + DNAREP1_DM LINE Penelope 6 594 0 5 589 2921 136 201 0 chr3RHet 559186 559931 -1957576 - DMCR1A LINE CR1 -1184 3286 2393 5 589 941 149 0 47 chr3RHet 559932 560185 -1957322 + DMSAT6 Satellite Satellite 145 385 -85 5 589 3791 50 18 6 chr3RHet 560185 560988 -1956519 - PROTOP_A DNA P 0 1105 429 5 589 1466 150 31 59 chr3RHet 560989 561465 -1956042 + DMSAT6 Satellite Satellite 5 467 -3 5 589 1715 144 24 39 chr3RHet 561510 561978 -1955529 + DMSAT6 Satellite Satellite 5 465 -5 5 589 186 71 0 0 chr3RHet 562023 562051 -1955456 + (T)n Simple_repeat Simple_repeat 1 28 0 5 589 53 40 0 0 chr3RHet 562156 562230 -1955277 + AT_rich Low_complexity Low_complexity 1 74 0 5 589 1439 141 25 25 chr3RHet 562235 562512 -1954995 - HOBO DNA hAT -2739 277 1 5 589 4522 98 114 5 chr3RHet 562608 563537 -1953970 + S_DM DNA Tc1 1 1030 -706 5 589 8930 83 71 2 chr3RHet 563535 565206 -1952301 - DOC3_DM LINE Jockey 0 4740 2970 5 589 5186 43 40 1 chr3RHet 565219 565901 -1951606 - DOC3_DM LINE Jockey -2267 2473 1766 5 589 6378 36 8 7 chr3RHet 565891 566720 -1950787 - DMRT1B LINE R1 0 5183 4354 5 589 3476 43 2 0 chr3RHet 566716 567162 -1950345 - DMRT1B LINE R1 -1286 3897 3451 5 589 5414 37 63 25 chr3RHet 567161 567906 -1949601 - DMRT1B LINE R1 -1836 3347 2575 5 589 10613 38 21 3 chr3RHet 567902 569314 -1948193 - DOC3_DM LINE Jockey -2951 1789 353 5 589 3540 119 53 15 chr3RHet 569304 569967 -1947540 + S_DM DNA Tc1 1049 1736 0 5 589 376 206 39 0 chr3RHet 569974 570076 -1947431 + Copia_I LTR Copia 1390 1495 -3098 5 589 214 264 17 43 chr3RHet 571281 571396 -1946111 + T-rich Low_complexity Low_complexity 2 113 0 5 589 663 327 54 8 chr3RHet 571425 571958 -1945549 - Invader2_I LTR Gypsy -148 4444 3887 5 589 17407 42 9 35 chr3RHet 572052 574450 -1943057 + Gypsy12_LTR LTR Gypsy 1 2336 0 5 589 2550 199 39 7 chr3RHet 574458 575050 -1942457 + TOM_I LTR Gypsy 2541 3151 -2961 5 589 389 248 17 17 chr3RHet 575031 575146 -1942361 + DM297_I LTR Gypsy 3380 3494 -2673 5 589 3222 261 21 9 chr3RHet 575146 576185 -1941322 + TOM_I LTR Gypsy 4557 5608 -504 5 589 1831 48 40 4 chr3RHet 576343 576594 -1940913 - DMTOM1_LTR LTR Gypsy -150 260 1 5 589 365 261 38 38 chr3RHet 576592 576751 -1940756 - DM176_I LTR Gypsy 0 6420 6262 5 589 371 299 103 23 chr3RHet 577601 577902 -1939605 - OSVALDO_I LTR Gypsy -4364 2289 1965 5 589 2605 116 10 69 chr3RHet 578801 579322 -1938185 + IDEFIX_LTR LTR Gypsy 105 594 0 5 589 30 19 0 54 chr3RHet 579547 579603 -1937904 + AT_rich Low_complexity Low_complexity 1 53 0 5 589 6797 171 35 34 chr3RHet 579611 581050 -1936457 + IDEFIX_I LTR Gypsy 48 1487 -4141 5 589 499 132 0 0 chr3RHet 581052 581128 -1936379 + IDEFIX_I LTR Gypsy 1726 1801 -3827 5 589 1232 124 43 0 chr3RHet 581128 581337 -1936170 + IDEFIX_I LTR Gypsy 2276 2493 -3135 5 589 8885 118 96 5 chr3RHet 581356 584117 -1933390 + IDEFIX_I LTR Gypsy 2616 5626 -2 5 589 1393 124 107 13 chr3RHet 584116 584426 -1933081 + IDEFIX_LTR LTR Gypsy 3 341 -253 5 589 1667 45 5 0 chr3RHet 584427 584647 -1932860 - S2_DM DNA Tc1 -767 968 748 5 589 46 0 0 0 chr3RHet 584665 584711 -1932796 + AT_rich Low_complexity Low_complexity 1 46 0 5 589 3032 126 18 18 chr3RHet 584745 585296 -1932211 + DOC LINE Jockey 4147 4697 -28 5 589 414 37 0 0 chr3RHet 585314 585368 -1932139 - DNAREP1_DM LINE Penelope -360 234 181 5 589 306 53 0 0 chr3RHet 585417 585455 -1932052 + DNAREP1_DM LINE Penelope 445 482 -112 5 589 9263 48 38 10 chr3RHet 585460 586716 -1930791 + DMCR1A LINE CR1 1547 2837 -1633 5 589 887 51 0 0 chr3RHet 586710 586828 -1930679 + DMCR1A LINE CR1 2964 3081 -1389 5 589 7705 66 75 7 chr3RHet 586828 588002 -1929505 + DMCR1A LINE CR1 3183 4470 0 5 589 325 57 0 70 chr3RHet 588007 588064 -1929443 + DNAREP1_DM LINE Penelope 508 560 -34 5 589 32 43 0 0 chr3RHet 588083 588129 -1929378 + AT_rich Low_complexity Low_complexity 1 46 0 5 589 268 340 6 6 chr3RHet 588640 588803 -1928704 - BURDOCK_I LTR Gypsy -4878 982 820 5 589 31 26 0 0 chr3RHet 589826 589864 -1927643 + AT_rich Low_complexity Low_complexity 1 38 0 5 589 216 0 0 0 chr3RHet 590288 590312 -1927195 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 589 7498 246 72 43 chr3RHet 590322 593383 -1924124 + TOM_I LTR Gypsy 1 3149 -2963 5 589 746 271 115 11 chr3RHet 593366 593732 -1923775 + DM297_I LTR Gypsy 3380 3783 -2384 5 589 1588 225 81 0 chr3RHet 593727 594122 -1923385 + DM297_I LTR Gypsy 3994 4420 -1747 5 589 3487 269 16 6 chr3RHet 594126 595276 -1922231 + TOM_I LTR Gypsy 4425 5585 -527 5 589 266 275 28 0 chr3RHet 595283 595392 -1922115 + TOM_I LTR Gypsy 5805 5916 -196 5 589 475 70 0 0 chr3RHet 595431 595502 -1922005 - DMTOM1_LTR LTR Gypsy -150 260 190 5 589 47 0 0 0 chr3RHet 596005 596052 -1921455 + AT_rich Low_complexity Low_complexity 1 47 0 5 589 676 123 0 9 chr3RHet 597852 597959 -1919548 - DMCR1A LINE CR1 -3024 1446 1341 5 589 1564 154 229 16 chr3RHet 597951 598382 -1919125 - DMCR1A LINE CR1 -3594 876 354 5 589 338 219 23 8 chr3RHet 598382 598511 -1918996 - DMCR1A LINE CR1 -4233 237 107 5 589 575 273 54 54 chr3RHet 598545 598827 -1918680 + DOC3_DM LINE Jockey 1313 1569 -3171 5 589 23 0 0 0 chr3RHet 600919 600942 -1916565 + AT_rich Low_complexity Low_complexity 1 23 0 5 589 213 241 0 48 chr3RHet 601166 601249 -1916258 + T-rich Low_complexity Low_complexity 6 84 0 5 589 21 57 0 0 chr3RHet 601478 601513 -1915994 + AT_rich Low_complexity Low_complexity 1 35 0 5 589 867 164 116 53 chr3RHet 601794 602019 -1915488 + DNAREP1_DM LINE Penelope 319 557 -37 5 589 435 267 30 35 chr3RHet 603814 604016 -1913491 - DMRT1C LINE R1 -4833 610 410 5 589 323 200 0 0 chr3RHet 604049 604109 -1913398 - DMRT1C LINE R1 -5229 214 155 5 589 930 168 193 47 chr3RHet 604418 604933 -1912574 - DNAREP1_DM LINE Penelope -50 544 59 5 589 9664 35 5 1 chr3RHet 604970 606177 -1911330 + G5_DM LINE Jockey 367 1578 -3278 5 589 603 14 0 0 chr3RHet 606176 606248 -1911259 + G5_DM LINE Jockey 2113 2184 -2672 5 589 20580 19 17 0 chr3RHet 606264 608751 -1908756 + G5_DM LINE Jockey 2327 4855 -1 5 589 340 74 0 18 chr3RHet 610160 610215 -1907292 - DNAREP1_DM LINE Penelope -347 247 194 5 589 401 151 302 0 chr3RHet 610215 610321 -1907186 - MAX_I LTR Pao -2395 5519 5382 5 589 2653 147 136 12 chr3RHet 610342 611062 -1906445 - MAX_I LTR Pao -2615 5299 4417 5 589 635 165 142 24 chr3RHet 611065 611506 -1906001 - DNAREP1_DM LINE Penelope -265 329 100 5 589 1841 112 57 53 chr3RHet 611516 612007 -1905500 - DNAREP1_DM LINE Penelope 0 594 1 5 589 585 290 34 0 chr3RHet 612041 612248 -1905259 - DMCR1A LINE CR1 -2570 1900 1687 5 589 227 217 0 0 chr3RHet 612322 612368 -1905139 - DM412B_LTR LTR Gypsy -291 280 235 5 589 326 237 13 0 chr3RHet 612907 612983 -1904524 - Gypsy8_I LTR Gypsy -4269 78 2 5 589 323 260 177 61 chr3RHet 612985 613149 -1904358 - Gypsy8_LTR LTR Gypsy -1 303 121 5 589 427 243 12 100 chr3RHet 613528 613688 -1903819 - Gypsy8_I LTR Gypsy -203 4144 3999 5 589 4147 46 175 34 chr3RHet 613867 614648 -1902859 - G3_DM LINE Jockey -59 4546 3656 5 589 7083 65 9 0 chr3RHet 614644 615550 -1901957 - G3_DM LINE Jockey -1142 3463 2550 5 589 319 75 0 36 chr3RHet 615544 615599 -1901908 - G3_DM LINE Jockey -2700 1905 1853 5 589 772 102 225 10 chr3RHet 615628 615829 -1901678 + DNAREP1_DM LINE Penelope 16 259 -335 5 589 40695 16 23 6 chr3RHet 615875 620579 -1896928 + DOC2_DM LINE Jockey 9 4793 0 5 589 346 114 544 0 chr3RHet 620593 620756 -1896751 + DNAREP1_DM LINE Penelope 305 581 -13 5 589 831 148 204 71 chr3RHet 620881 621150 -1896357 + Gypsy3_LTR LTR Gypsy 1 305 -93 5 589 29002 61 62 11 chr3RHet 621178 625027 -1892480 - DMCR1A LINE CR1 0 4470 427 5 589 9875 133 45 0 chr3RHet 625027 626680 -1890827 - DMRT1B LINE R1 0 5183 3456 5 589 5151 110 85 1 chr3RHet 626674 627571 -1889936 - DMRT1B LINE R1 -1871 3312 2341 5 589 2879 116 14 0 chr3RHet 627571 627993 -1889514 - DMRT1B LINE R1 -3068 2115 1688 5 589 3200 137 81 0 chr3RHet 627998 628553 -1888954 - DMRT1B LINE R1 -4088 1095 496 5 589 2903 73 30 23 chr3RHet 628706 629143 -1888364 - DMCR1A LINE CR1 -4030 440 1 5 589 1449 271 34 19 chr3RHet 629537 629954 -1887553 + Gypsy3_I LTR Gypsy 525 947 -5230 5 589 4873 171 110 49 chr3RHet 629963 632239 -1885268 + Gypsy3_I LTR Gypsy 1072 3879 -2298 5 589 3838 165 83 21 chr3RHet 632242 632967 -1884540 + Gypsy3_I LTR Gypsy 4139 4908 -1269 5 589 4736 155 90 93 chr3RHet 632989 634014 -1883493 + Gypsy3_I LTR Gypsy 5156 6177 0 5 589 285 169 185 0 chr3RHet 634014 634079 -1883428 + Gypsy3_LTR LTR Gypsy 1 77 -330 5 589 28 0 0 0 chr3RHet 634083 634111 -1883396 + AT_rich Low_complexity Low_complexity 1 28 0 5 589 676 199 64 49 chr3RHet 634112 634369 -1883138 + Gypsy3_LTR LTR Gypsy 150 398 0 5 589 336 128 124 31 chr3RHet 634763 634860 -1882647 + Gypsy6_LTR LTR Gypsy 155 260 -147 5 589 23 33 0 0 chr3RHet 635627 635657 -1881850 + AT_rich Low_complexity Low_complexity 1 30 0 5 589 11917 56 29 11 chr3RHet 636538 638043 -1879464 - G5A_DM LINE Jockey 0 2841 1311 5 589 3963 18 0 4 chr3RHet 638041 638493 -1879014 - DMCR1A LINE CR1 -1 4469 4020 5 589 8159 36 47 22 chr3RHet 638493 639571 -1877936 - PROTOP_A DNA P 0 1105 1 5 589 8284 49 47 0 chr3RHet 639571 640857 -1876650 - DMCR1A LINE CR1 -444 4026 2680 5 589 4165 217 85 58 chr3RHet 640871 643144 -1874363 + Gypsy12_LTR LTR Gypsy 1 2336 0 5 589 1257 240 59 8 chr3RHet 643399 643937 -1873570 - DOC4_DM LINE Jockey -2040 2753 1865 5 589 376 295 55 40 chr3RHet 643977 644178 -1873329 - Invader4_I LTR Gypsy -2203 210 7 5 589 2362 117 103 4 chr3RHet 644490 645240 -1872267 + S_DM DNA Tc1 1 880 -856 5 589 2375 39 104 0 chr3RHet 645245 645552 -1871955 - DOC3_DM LINE Jockey -185 4555 4217 5 589 11024 38 59 0 chr3RHet 645558 647745 -1869762 - DOC3_DM LINE Jockey -663 4077 1762 5 589 4857 48 60 11 chr3RHet 647742 648394 -1869113 - DOC3_DM LINE Jockey -3582 1158 475 5 589 2111 24 0 0 chr3RHet 648392 648641 -1868866 - FW_DM LINE Jockey -3 4689 4441 5 589 7288 16 0 0 chr3RHet 648640 649460 -1868047 - FW_DM LINE Jockey -1116 3576 2757 5 589 20996 20 2 5 chr3RHet 649467 651866 -1865641 - FW_DM LINE Jockey -2296 2396 3 5 589 2612 52 87 0 chr3RHet 651879 652327 -1865180 - DOC3_DM LINE Jockey -4253 487 1 5 589 4090 112 57 9 chr3RHet 652317 653014 -1864493 + S_DM DNA Tc1 1006 1736 0 5 589 258 222 75 32 chr3RHet 653171 653264 -1864243 - Gypsy6A_LTR LTR Gypsy -117 303 207 5 589 2237 78 107 51 chr3RHet 654120 654512 -1862995 - DM297_LTR LTR Gypsy 0 414 1 5 589 2528 71 105 23 chr3RHet 654512 655163 -1862344 - DM297_I LTR Gypsy 0 6167 5464 5 73 7887 59 79 1 chr3RHet 655162 656238 -1861269 - DM297_I LTR Gypsy -1879 4288 3129 5 590 2354 48 25 22 chr3RHet 656236 656558 -1860949 - DM297_I LTR Gypsy -3234 2933 2611 5 590 14459 89 54 15 chr3RHet 656562 658820 -1858687 - DM297_I LTR Gypsy -3821 2346 1 5 590 1135 88 23 6 chr3RHet 658820 658991 -1858516 - DM297_LTR LTR Gypsy 0 414 241 5 590 1026 308 91 22 chr3RHet 659261 659899 -1857608 - FW2_DM LINE Jockey -524 3437 2756 5 590 376 147 59 0 chr3RHet 660299 660367 -1857140 + DMCR1A LINE CR1 3198 3269 -1201 5 590 3962 9 0 0 chr3RHet 660865 661310 -1856197 + FW_DM LINE Jockey 2831 3275 -1417 5 590 376 147 59 0 chr3RHet 661808 661876 -1855631 - DMCR1A LINE CR1 -1201 3269 3198 5 590 1086 305 146 16 chr3RHet 662276 663079 -1854428 + FW2_DM LINE Jockey 2756 3662 -299 5 590 651 97 0 0 chr3RHet 663271 663374 -1854133 - Mariner2_DM DNA Tc1 -18 894 792 5 590 3826 35 80 0 chr3RHet 663359 663844 -1853663 - DOC3_DM LINE Jockey 0 4740 4217 5 590 11014 32 63 0 chr3RHet 663850 665448 -1852059 - DOC3_DM LINE Jockey -663 4077 2380 5 590 230 281 11 11 chr3RHet 668293 668383 -1849124 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 5 590 262 358 0 0 chr3RHet 669406 669617 -1847890 + Invader3_I LTR Gypsy 4059 4193 -695 5 590 266 26 0 26 chr3RHet 670370 670409 -1847098 - DOC3_DM LINE Jockey -3261 1479 1442 5 590 476 30 0 29 chr3RHet 670400 670469 -1847038 - DOC3_DM LINE Jockey -3413 1327 1261 5 590 542 15 0 0 chr3RHet 670481 670546 -1846961 - DOC3_DM LINE Jockey -3793 947 883 5 590 2389 39 0 0 chr3RHet 670544 670851 -1846656 - DOC3_DM LINE Jockey -4136 604 298 5 590 2870 78 38 2 chr3RHet 670878 671300 -1846207 - Mariner2_DM DNA Tc1 -103 809 373 5 590 507 61 0 0 chr3RHet 671297 671363 -1846144 - Mariner2_DM DNA Tc1 -822 90 25 5 590 653 109 0 0 chr3RHet 671368 671469 -1846038 - DNAREP1_DM LINE Penelope 0 594 494 5 590 1137 126 301 0 chr3RHet 671486 671790 -1845717 - DNAREP1_DM LINE Penelope -199 395 1 5 590 330 297 0 0 chr3RHet 672817 672918 -1844589 + Jockey2 LINE Jockey 721 821 -2607 5 590 357 284 0 0 chr3RHet 673745 673847 -1843660 + Jockey2 LINE Jockey 1900 2001 -1427 5 590 605 124 215 0 chr3RHet 673999 674120 -1843387 - DNAREP1_DM LINE Penelope -10 584 438 5 590 1158 78 63 18 chr3RHet 674578 674801 -1842706 + S2_DM DNA Tc1 1 233 -1502 5 590 2549 68 213 7 chr3RHet 674824 675499 -1842008 - S2_DM DNA Tc1 -718 1017 204 5 590 5557 19 0 0 chr3RHet 675499 676178 -1841329 - PROTOP DNA P 0 4480 3802 5 590 6041 35 21 6 chr3RHet 676173 676984 -1840523 - PROTOP DNA P -3657 823 1 5 590 495 110 80 0 chr3RHet 676984 677084 -1840423 - S2_DM DNA Tc1 -1525 210 103 5 590 27 0 0 0 chr3RHet 677108 677135 -1840372 + AT_rich Low_complexity Low_complexity 1 27 0 5 590 471 174 179 7 chr3RHet 677308 677453 -1840054 + MDG1_I LTR Gypsy 5104 5273 -1323 5 590 398 204 19 0 chr3RHet 677482 677585 -1839922 + MDG1_I LTR Gypsy 5485 5589 -1007 5 590 335 187 13 0 chr3RHet 677580 677655 -1839852 + MDG1_I LTR Gypsy 5846 5921 -675 5 590 380 215 105 95 chr3RHet 677829 678019 -1839488 + GTWIN_LTR LTR Gypsy 162 353 -142 5 590 3037 84 42 6 chr3RHet 678391 678867 -1838640 - G5A_DM LINE Jockey -8 2833 2341 5 590 311 87 0 0 chr3RHet 678866 678912 -1838595 - G5A_DM LINE Jockey -657 2184 2139 5 590 609 195 112 6 chr3RHet 678922 679092 -1838415 + DMRT1B LINE R1 358 545 -4638 5 590 662 206 94 0 chr3RHet 679093 679253 -1838254 + DMRT1B LINE R1 1133 1307 -3876 5 590 1064 125 120 0 chr3RHet 679255 679447 -1838060 + DMRT1B LINE R1 4128 4342 -841 5 590 3222 136 2 2 chr3RHet 679445 679974 -1837533 + DMRT1B LINE R1 4466 4994 -189 5 590 466 279 68 0 chr3RHet 679976 680137 -1837370 - Gypsy6_I LTR Gypsy -212 6800 6629 5 590 663 10 224 0 chr3RHet 680146 680244 -1837263 - DMCR1A LINE CR1 -2 4468 4349 5 590 2854 43 5 0 chr3RHet 680235 680611 -1836896 + DOC3_DM LINE Jockey 4363 4740 0 5 590 422 285 20 55 chr3RHet 680874 681167 -1836340 - QUASIMODO_I LTR Gypsy -2979 3081 2836 5 590 930 282 102 37 chr3RHet 681237 681855 -1835652 - TOM_I LTR Gypsy -3337 3247 2203 5 590 2048 124 89 0 chr3RHet 682188 682559 -1834948 - FW_DM LINE Jockey -8 4684 4281 5 590 2343 167 267 1 chr3RHet 682581 683458 -1834049 - FW_DM LINE Jockey -2906 1786 676 5 590 1167 295 38 5 chr3RHet 683765 684428 -1833079 - QUASIMODO_I LTR Gypsy 0 6060 5376 5 590 318 238 0 10 chr3RHet 684427 684529 -1832978 - TV1I LTR Gypsy -1746 4217 4117 5 590 2365 28 75 27 chr3RHet 684543 684877 -1832630 - DMCR1A LINE CR1 0 4470 4121 5 590 2685 43 20 0 chr3RHet 684895 685243 -1832264 - DMCR1A LINE CR1 -1172 3298 2944 5 590 2137 39 91 0 chr3RHet 685251 685757 -1831750 - DMCR1A LINE CR1 -1682 2788 2237 5 590 1090 57 0 6 chr3RHet 685771 685931 -1831576 - DMCR1A LINE CR1 -4271 199 41 5 590 252 342 13 13 chr3RHet 685931 686082 -1831425 - Gypsy6_I LTR Gypsy -389 6623 6473 5 590 607 247 191 17 chr3RHet 686133 686364 -1831143 - Gypsy2_I LTR Gypsy -613 5522 5252 5 590 2170 249 130 7 chr3RHet 686612 687287 -1830220 - Gypsy6_I LTR Gypsy -1706 5306 4549 5 590 686 269 0 0 chr3RHet 687282 687464 -1830043 - Gypsy3_I LTR Gypsy -3418 2759 2578 5 590 1223 310 144 39 chr3RHet 688252 690356 -1827151 - Gypsy4_I LTR Gypsy -609 5679 3354 5 590 1114 306 0 0 chr3RHet 690363 690749 -1826758 - Gypsy2_I LTR Gypsy -3066 3069 2684 5 590 15941 72 11 8 chr3RHet 690864 693246 -1824261 - DOC3_DM LINE Jockey 0 4740 1580 5 590 2589 296 20 8 chr3RHet 693239 694272 -1823235 - Gypsy4_I LTR Gypsy -3585 2703 1658 5 590 298 277 0 0 chr3RHet 694631 694725 -1822782 - Gypsy4_I LTR Gypsy -5022 1266 1173 5 590 1865 43 8 45 chr3RHet 694846 695112 -1822395 - BLOOD_LTR LTR Gypsy -143 256 1 5 590 52037 13 27 9 chr3RHet 695112 701606 -1815901 - BLOOD_I LTR Gypsy 0 6613 1 5 590 1769 55 8 52 chr3RHet 701723 701991 -1815516 - BLOOD_LTR LTR Gypsy -143 256 1 5 590 573 286 106 21 chr3RHet 702008 702375 -1815132 - Gypsy4_I LTR Gypsy -3415 1262 743 5 590 4715 23 133 0 chr3RHet 702714 703589 -1813918 + G5_DM LINE Jockey 3866 4856 0 5 590 1165 261 9 13 chr3RHet 704431 704749 -1812758 - Gypsy2_I LTR Gypsy -3998 2137 1821 5 590 1359 309 122 31 chr3RHet 704749 705485 -1812022 - Gypsy3_I LTR Gypsy -4071 2106 1304 5 590 36 23 0 0 chr3RHet 705882 705925 -1811582 + AT_rich Low_complexity Low_complexity 1 43 0 5 590 6428 46 105 1 chr3RHet 705957 707001 -1810506 - PROTOP_B DNA P 0 1153 1 5 590 2793 304 73 34 chr3RHet 707001 708753 -1808754 + Gypsy4_I LTR Gypsy 933 2723 -3565 5 590 3026 284 100 47 chr3RHet 708786 710560 -1806947 + Gypsy4_I LTR Gypsy 2845 4712 -1576 5 590 794 358 33 25 chr3RHet 710659 711648 -1805859 + Gypsy4_I LTR Gypsy 5100 6096 -192 5 590 608 260 240 13 chr3RHet 712227 712535 -1804972 + Copia_I LTR Copia 1725 2102 -2491 5 590 4070 52 275 13 chr3RHet 712545 713249 -1804258 + DOC3_DM LINE Jockey 1 889 -3851 5 590 1421 19 126 0 chr3RHet 713249 713504 -1804003 - Gypsy4_LTR LTR Gypsy 0 287 1 5 590 12239 7 6 0 chr3RHet 713504 714928 -1802579 - Gypsy4_I LTR Gypsy 0 6288 4856 5 590 1852 308 28 11 chr3RHet 714931 715949 -1801558 + Gypsy4_I LTR Gypsy 2959 4712 -1576 5 590 784 359 33 25 chr3RHet 716024 717037 -1800470 + Gypsy4_I LTR Gypsy 5100 6096 -192 5 590 608 260 240 13 chr3RHet 717617 717925 -1799582 + Copia_I LTR Copia 1725 2102 -2491 5 590 4070 50 248 12 chr3RHet 717935 718654 -1798853 + DOC3_DM LINE Jockey 1 889 -3851 5 590 2394 24 0 0 chr3RHet 718654 718941 -1798566 - Gypsy4_LTR LTR Gypsy 0 287 1 5 590 37535 8 4 0 chr3RHet 718941 725211 -1792296 - Gypsy4_I LTR Gypsy 0 6288 1 5 590 2452 14 0 0 chr3RHet 725211 725498 -1792009 - Gypsy4_LTR LTR Gypsy 0 287 1 5 590 2020 34 26 19 chr3RHet 725498 725769 -1791738 + DOC3_DM LINE Jockey 886 1158 -3582 5 590 10235 35 6 3 chr3RHet 725766 727436 -1790071 + DOC3_DM LINE Jockey 1762 3760 -980 5 590 2493 55 12 0 chr3RHet 727438 727763 -1789744 + DOC3_DM LINE Jockey 4169 4497 -243 5 590 2847 56 15 0 chr3RHet 727756 728148 -1789359 + DOC3_DM LINE Jockey 4343 4740 0 5 590 280 265 52 21 chr3RHet 728150 728343 -1789164 + Copia_I LTR Copia 2097 2295 -2298 5 590 485 304 40 36 chr3RHet 728589 729044 -1788463 + Copia_I LTR Copia 2721 3380 -1213 5 590 2320 191 21 14 chr3RHet 729246 729771 -1787736 + FW_DM LINE Jockey 167 652 -4040 5 590 952 27 136 26 chr3RHet 729788 729942 -1787565 + DMCR1A LINE CR1 1 171 -4299 5 590 686 269 0 0 chr3RHet 730716 730898 -1786609 + Gypsy3_I LTR Gypsy 2578 2759 -3418 5 590 820 182 0 0 chr3RHet 730893 731047 -1786460 + Gypsy6_I LTR Gypsy 4549 4702 -2310 5 590 672 273 0 0 chr3RHet 731049 731232 -1786275 + Gypsy3_I LTR Gypsy 2577 2759 -3418 5 590 1657 259 25 5 chr3RHet 731227 731786 -1785721 + Gypsy6_I LTR Gypsy 3827 4926 -2086 5 590 219 188 0 0 chr3RHet 734810 734858 -1782649 + T-rich Low_complexity Low_complexity 1 48 0 5 590 312 148 0 0 chr3RHet 735175 735236 -1782271 + (T)n Simple_repeat Simple_repeat 1 61 0 5 590 7431 46 43 8 chr3RHet 735902 736888 -1780619 + DMCR1A LINE CR1 142 1161 -3309 5 590 17416 35 24 0 chr3RHet 736874 739072 -1778435 + DMCR1A LINE CR1 1319 3569 -901 5 590 4967 24 42 6 chr3RHet 739074 739709 -1777798 + DMCR1A LINE CR1 3813 4470 0 5 590 318 238 0 10 chr3RHet 739723 739825 -1777682 + TV1I LTR Gypsy 4117 4217 -1746 5 590 1203 292 38 5 chr3RHet 739824 740487 -1777020 + QUASIMODO_I LTR Gypsy 5376 6060 0 5 590 1705 166 267 1 chr3RHet 740794 741671 -1775836 + FW_DM LINE Jockey 676 1786 -2906 5 590 2019 127 89 0 chr3RHet 741693 742064 -1775443 + FW_DM LINE Jockey 4281 4684 -8 5 590 923 284 102 37 chr3RHet 742397 743015 -1774492 + ROVER-I_DM LTR Gypsy 2590 3247 -3337 5 590 378 300 10 25 chr3RHet 743088 743378 -1774129 + QUASIMODO_I LTR Gypsy 2547 3081 -2979 5 590 19836 39 51 4 chr3RHet 743641 748159 -1769348 - DOC3_DM LINE Jockey 0 4740 11 5 590 291 251 69 3 chr3RHet 748213 748410 -1769097 + DM297_I LTR Gypsy 3678 3996 -2171 5 590 312 50 0 0 chr3RHet 748536 748576 -1768931 + DNAREP1_DM LINE Penelope 1 40 -554 5 590 21 0 0 0 chr3RHet 750282 750303 -1767204 + AT_rich Low_complexity Low_complexity 1 21 0 5 590 418 131 78 67 chr3RHet 750380 750470 -1767037 + DNAREP1_DM LINE Penelope 503 593 -1 5 590 1432 169 40 15 chr3RHet 750817 751142 -1766365 - Gypsy2_LTR LTR Gypsy -17 336 4 5 590 361 149 0 119 chr3RHet 751144 751228 -1766279 - Gypsy2_I LTR Gypsy -11 6124 6051 5 590 26235 116 39 20 chr3RHet 751239 755727 -1761780 - Gypsy2_I LTR Gypsy -194 5941 1713 5 590 2655 148 43 2 chr3RHet 755747 756208 -1761299 - Gypsy2_I LTR Gypsy -4568 1567 1088 5 590 2348 109 2 52 chr3RHet 756210 756616 -1760891 - Gypsy12_LTR LTR Gypsy 0 2336 1951 5 590 5555 191 35 67 chr3RHet 756617 758203 -1759304 - Gypsy12_LTR LTR Gypsy -800 1536 2 5 590 6660 79 0 10 chr3RHet 758203 759107 -1758400 - Gypsy12_I LTR Gypsy -31 5515 4621 5 590 459 143 0 0 chr3RHet 759130 759207 -1758300 - Gypsy2_I LTR Gypsy -4971 1164 1088 5 590 2373 107 2 52 chr3RHet 759209 759615 -1757892 - Gypsy12_LTR LTR Gypsy 0 2336 1951 5 590 3177 189 52 69 chr3RHet 759616 760593 -1756914 - Gypsy12_LTR LTR Gypsy -800 1536 576 5 590 3046 80 0 2 chr3RHet 760593 761008 -1756499 - Gypsy12_I LTR Gypsy -788 4758 4345 5 590 3196 111 4 0 chr3RHet 761001 761477 -1756030 - Gypsy12_I LTR Gypsy -3348 2198 1721 5 590 3100 79 0 15 chr3RHet 761474 762151 -1755356 - Gypsy12_I LTR Gypsy -4026 1520 810 5 590 5509 45 19 8 chr3RHet 762151 763378 -1754129 - PROTOP DNA P 0 1105 1 5 590 437 146 0 33 chr3RHet 763378 763467 -1754040 - Gypsy12_I LTR Gypsy -4730 816 731 5 590 676 300 74 32 chr3RHet 763477 763939 -1753568 - TV1I LTR Gypsy -5066 897 417 5 590 186 43 0 0 chr3RHet 763972 763995 -1753512 + (TTTTTA)n Simple_repeat Simple_repeat 1 23 0 5 590 2596 219 103 14 chr3RHet 764694 765487 -1752020 + TOM_I LTR Gypsy 2196 3059 -3053 5 590 854 224 91 17 chr3RHet 765561 765793 -1751714 + TOM_I LTR Gypsy 3727 3975 -2137 5 590 3249 43 0 0 chr3RHet 765793 766210 -1751297 + PROTOP_A DNA P 1 417 -688 5 590 616 303 20 20 chr3RHet 766526 766826 -1750681 - TV1I LTR Gypsy -5066 897 598 5 590 3621 94 20 36 chr3RHet 766847 767899 -1749608 - Gypsy12_I LTR Gypsy -4442 1104 9 5 590 40708 3 0 0 chr3RHet 767908 772631 -1744876 + DOC LINE Jockey 3 4725 0 5 590 4258 48 15 3 chr3RHet 772674 773416 -1744091 - PROTOP DNA P -332 773 159 5 590 6047 55 73 0 chr3RHet 773516 774405 -1743102 + DM297_I LTR Gypsy 3191 4144 -2023 5 590 2242 60 190 4 chr3RHet 774398 774950 -1742557 + DM297_I LTR Gypsy 3697 4351 -1816 5 590 5617 112 18 18 chr3RHet 774920 775995 -1741512 + MDG1_I LTR Gypsy 5401 6799 -98 5 590 1620 25 0 9 chr3RHet 775999 776324 -1741183 + (TAA)n Simple_repeat Simple_repeat 1 322 0 5 590 1371 145 93 13 chr3RHet 776326 776626 -1740881 + MDG1_LTR LTR Gypsy 89 412 -30 5 590 600 255 15 15 chr3RHet 776627 776822 -1740685 + BS2 LINE Jockey 2721 2915 -1806 5 590 2801 81 25 0 chr3RHet 776817 777213 -1740294 + BS3_DM LINE Jockey 16 421 -1369 5 590 3913 74 12 0 chr3RHet 777213 777726 -1739781 + BS3_DM LINE Jockey 526 1044 -746 5 590 1812 76 0 0 chr3RHet 777716 777952 -1739555 + BS3_DM LINE Jockey 1311 1546 -244 5 590 15882 71 74 2 chr3RHet 777960 780269 -1737238 + DM297_I LTR Gypsy 2179 4653 -1514 5 590 229 163 47 0 chr3RHet 780527 780570 -1736937 + DM176_LTR LTR Gypsy 180 224 -283 5 590 315 0 44 22 chr3RHet 780544 780589 -1736918 + DM297_LTR LTR Gypsy 125 170 -244 5 590 2423 70 40 14 chr3RHet 780575 780923 -1736584 - QUASIMODO_LTR LTR Gypsy -301 357 1 5 590 32 26 0 0 chr3RHet 780932 780971 -1736536 + AT_rich Low_complexity Low_complexity 1 39 0 5 590 641 190 0 0 chr3RHet 781004 781141 -1736366 - QUASIMODO_I LTR Gypsy -304 5756 5620 5 590 8093 248 56 11 chr3RHet 781161 783811 -1733696 - QUASIMODO_I LTR Gypsy -1461 4599 1830 5 590 901 308 32 19 chr3RHet 783898 784371 -1733136 - TV1I LTR Gypsy -5056 907 429 5 590 213 209 14 43 chr3RHet 784392 784462 -1733045 + (TTG)n Simple_repeat Simple_repeat 2 69 0 5 590 3033 119 89 33 chr3RHet 784803 785401 -1732106 - QUASIMODO_LTR LTR Gypsy -27 631 1 5 590 954 132 33 11 chr3RHet 785421 785604 -1731903 + DMCR1A LINE CR1 7 193 -4277 5 73 7803 57 8 8 chr3RHet 785603 786605 -1730902 + DMCR1A LINE CR1 1350 2351 -2119 5 591 219 125 0 0 chr3RHet 786608 786648 -1730859 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 591 1845 56 261 0 chr3RHet 786649 786936 -1730571 - ROOA_I LTR Pao -1844 5005 4644 5 591 3236 38 91 3 chr3RHet 786933 787702 -1729805 + DMCR1A LINE CR1 2950 3786 -684 5 591 1544 34 0 104 chr3RHet 787704 787934 -1729573 - MDG3_LTR LTR Gypsy -61 206 1 5 591 13336 18 16 1 chr3RHet 787934 789705 -1727802 - MDG3_I LTR Gypsy 0 4986 3155 5 591 13595 20 126 48 chr3RHet 789705 791565 -1725942 - MDG3_I LTR Gypsy -2980 2006 1 5 591 1905 49 3 92 chr3RHet 791564 791857 -1725650 - MDG3_LTR LTR Gypsy 0 267 1 5 591 1406 29 12 0 chr3RHet 791857 792027 -1725480 + DMCR1A LINE CR1 4298 4469 -1 5 591 4400 51 84 3 chr3RHet 792026 792620 -1724887 - ROOA_I LTR Pao -2215 4634 3993 5 591 1632 23 116 0 chr3RHet 792614 792830 -1724677 - ROOA_I LTR Pao -4390 2459 2219 5 591 2478 48 122 0 chr3RHet 792850 793187 -1724320 - ROOA_LTR LTR Pao 0 386 9 5 591 812 28 0 0 chr3RHet 793189 793296 -1724211 + DMCR1A LINE CR1 202 308 -4162 5 591 4388 10 0 0 chr3RHet 793287 793781 -1723726 + FW_DM LINE Jockey 1701 2194 -2498 5 591 18976 20 5 0 chr3RHet 793782 795985 -1721522 + FW_DM LINE Jockey 2479 4691 -1 5 591 13106 58 91 10 chr3RHet 795982 798434 -1719073 + DMCR1A LINE CR1 1585 4234 -236 5 591 1512 60 25 25 chr3RHet 798435 798676 -1718831 + Jockey2 LINE Jockey 3182 3422 -6 5 591 1786 74 16 0 chr3RHet 798677 798919 -1718588 + DMCR1A LINE CR1 4225 4470 0 5 591 594 149 84 0 chr3RHet 798918 799025 -1718482 - DM176_LTR LTR Gypsy -262 245 130 5 591 1242 130 153 0 chr3RHet 799087 799341 -1718166 - DM176_I LTR Gypsy -3 6417 6125 5 591 1119 183 26 30 chr3RHet 799336 799601 -1717906 + Gypsy2_LTR LTR Gypsy 33 296 -57 5 591 10346 141 92 12 chr3RHet 799666 801649 -1715858 - DM176_I LTR Gypsy -301 6119 3979 5 591 2020 149 145 7 chr3RHet 801633 802046 -1715461 - DM176_I LTR Gypsy -2546 3874 3405 5 591 2359 111 74 5 chr3RHet 802058 802437 -1715070 - DM176_I LTR Gypsy -3528 2892 2488 5 591 21 57 0 0 chr3RHet 803158 803193 -1714314 + AT_rich Low_complexity Low_complexity 1 35 0 5 591 26 50 0 0 chr3RHet 803410 803450 -1714057 + AT_rich Low_complexity Low_complexity 1 40 0 5 591 256 247 13 25 chr3RHet 803998 804077 -1713430 - IDEFIX_I LTR Gypsy -2096 3532 3455 5 591 28 0 0 0 chr3RHet 804185 804213 -1713294 + AT_rich Low_complexity Low_complexity 1 28 0 5 591 583 292 60 39 chr3RHet 804674 805009 -1712498 - Gypsy4_I LTR Gypsy -2815 3473 3132 5 591 469 178 19 0 chr3RHet 805339 805446 -1712061 - TLD2 Unknown Unknown -24 194 86 5 591 22 0 0 0 chr3RHet 805446 805468 -1712039 + AT_rich Low_complexity Low_complexity 1 22 0 5 591 2220 145 28 5 chr3RHet 805468 805856 -1711651 - Invader1_LTR LTR Gypsy 0 423 27 5 591 40813 15 0 5 chr3RHet 805866 810582 -1706925 - FW_DM LINE Jockey 0 4692 1 5 591 2515 117 73 7 chr3RHet 810633 811072 -1706435 - Invader1_I LTR Gypsy 0 3186 2719 5 591 560 346 49 31 chr3RHet 811260 811836 -1705671 - MICROPIA_I LTR Gypsy -2936 1540 955 5 591 2062 143 48 5 chr3RHet 812040 812406 -1705101 - Invader1_LTR LTR Gypsy 0 423 42 5 591 8276 45 11 46 chr3RHet 812406 813551 -1703956 - PROTOP_A DNA P 0 1105 1 5 591 299 94 0 117 chr3RHet 813551 813610 -1703897 - Invader1_LTR LTR Gypsy -371 52 1 5 591 1939 43 43 0 chr3RHet 813610 813865 -1703642 - Gypsy11_LTR LTR Gypsy -186 266 1 5 591 2604 254 8 26 chr3RHet 813878 814073 -1703434 - TOM_I LTR Gypsy -527 5585 5393 5 591 195 42 0 0 chr3RHet 814073 814097 -1703410 + (ATGTG)n Simple_repeat Simple_repeat 1 24 0 5 591 2604 254 8 26 chr3RHet 814097 814666 -1702841 - TOM_I LTR Gypsy -720 5392 4835 5 591 355 241 35 0 chr3RHet 814676 814763 -1702744 - DM297_I LTR Gypsy -2003 4164 4075 5 591 6462 222 52 5 chr3RHet 814751 816279 -1701228 - TOM_I LTR Gypsy -2172 3940 2341 5 591 3002 269 95 65 chr3RHet 816335 818221 -1699286 - TOM_I LTR Gypsy -4170 1942 1 5 591 1323 41 0 6 chr3RHet 818221 818392 -1699115 - DMTOM1_LTR LTR Gypsy 0 410 241 5 591 9219 27 2 1 chr3RHet 818392 819496 -1698011 - PROTOP_A DNA P 0 1105 1 5 591 1921 62 15 0 chr3RHet 819496 819740 -1697767 - DMTOM1_LTR LTR Gypsy -162 248 1 5 591 435 134 104 26 chr3RHet 819947 820062 -1697445 + Gypsy6_LTR LTR Gypsy 155 278 -129 5 591 1015 88 61 0 chr3RHet 820065 820212 -1697295 - DNAREP1_DM LINE Penelope -438 156 1 5 591 4140 58 148 12 chr3RHet 820485 821326 -1696181 + TRANSIB3 DNA Transib 54 1009 -1874 5 591 2067 63 42 5 chr3RHet 821324 821702 -1695805 + TRANSIB3 DNA Transib 2391 2883 0 5 591 493 214 51 0 chr3RHet 821717 821834 -1695673 + DMCR1A LINE CR1 447 569 -3901 5 591 357 306 34 71 chr3RHet 821934 822201 -1695306 - ROO_I LTR Pao -5597 2659 2403 5 591 233 238 131 0 chr3RHet 822403 822487 -1695020 - ROO_I LTR Pao -6239 2017 1923 5 591 7553 93 24 14 chr3RHet 822600 823762 -1693745 - I_DM LINE I -1505 4726 3553 5 591 4348 91 20 0 chr3RHet 823782 824432 -1693075 - I_DM LINE I -3311 2920 2258 5 591 986 128 6 6 chr3RHet 824425 824590 -1692917 - I_DM LINE I -4294 1937 1773 5 591 4994 167 81 109 chr3RHet 824590 826227 -1691280 - Gypsy12A_LTR LTR Gypsy 0 2280 691 5 591 424 158 0 73 chr3RHet 826257 826339 -1691168 - Gypsy12_LTR LTR Gypsy -2260 76 1 5 591 5540 117 40 14 chr3RHet 826338 827172 -1690335 - Gypsy12_I LTR Gypsy 0 5546 4692 5 591 1901 125 112 3 chr3RHet 827160 827472 -1690035 - Gypsy12_I LTR Gypsy -1334 4212 3867 5 591 4896 111 32 1 chr3RHet 827468 828188 -1689319 - Gypsy12_I LTR Gypsy -2189 3357 2616 5 591 1523 65 25 0 chr3RHet 828189 828389 -1689118 - Invader2_LTR LTR Gypsy -61 205 1 5 591 14635 29 2 2 chr3RHet 828389 830214 -1687293 - Invader2_I LTR Gypsy 0 4592 2769 5 591 5680 23 9 3 chr3RHet 830212 830911 -1686596 - Invader2_I LTR Gypsy -2017 2575 1873 5 591 7823 53 62 13 chr3RHet 830898 831989 -1685518 - Invader2_I LTR Gypsy -3373 1219 75 5 591 27383 0 0 0 chr3RHet 831937 835151 -1682356 - DOC LINE Jockey 0 4725 1512 5 591 677 46 0 0 chr3RHet 835153 835240 -1682267 - Invader2_I LTR Gypsy -4452 140 54 5 591 2975 210 66 119 chr3RHet 835241 837110 -1680397 - Gypsy12A_LTR LTR Gypsy -531 1749 34 5 591 10437 70 21 20 chr3RHet 837106 838736 -1678771 - I_DM LINE I -4497 1734 103 5 591 4457 35 91 2 chr3RHet 840041 840645 -1676862 + QUASIMODO_LTR LTR Gypsy 1 658 0 5 591 12273 51 24 4 chr3RHet 840645 842322 -1675185 + QUASIMODO_I LTR Gypsy 1 1712 -4348 5 591 22064 61 28 10 chr3RHet 842324 845661 -1671846 + QUASIMODO_I LTR Gypsy 1568 5392 -668 5 591 3528 0 0 0 chr3RHet 845661 846060 -1671447 + BLOOD_LTR LTR Gypsy 1 399 0 5 591 56565 0 0 0 chr3RHet 846060 852674 -1664833 + BLOOD_I LTR Gypsy 1 6613 0 5 591 3528 0 0 0 chr3RHet 852674 853073 -1664434 + BLOOD_LTR LTR Gypsy 1 399 0 5 591 1266 23 0 0 chr3RHet 853073 853245 -1664262 + QUASIMODO_I LTR Gypsy 5389 5560 -500 5 591 4279 25 50 0 chr3RHet 853245 853809 -1663698 - PROTOP_A DNA P 0 1105 514 5 591 43309 8 9 0 chr3RHet 853809 858924 -1658583 + DMRT1A LINE R1 1 5160 -23 5 591 1477 65 14 14 chr3RHet 858918 859135 -1658372 + QUASIMODO_LTR LTR Gypsy 442 658 0 5 591 4302 38 88 22 chr3RHet 860644 861267 -1656240 - TRANSIB2 DNA Transib -633 2211 1548 5 591 3328 70 68 4 chr3RHet 861265 861767 -1655740 - TRANSIB2 DNA Transib -1494 1350 817 5 591 1563 42 0 14 chr3RHet 861768 861985 -1655522 - TRANSIB2 DNA Transib -2622 222 9 5 591 315 356 50 6 chr3RHet 862918 863099 -1654408 + OSVALDO_I LTR Gypsy 2027 2215 -4438 5 591 21 57 0 0 chr3RHet 863194 863229 -1654278 + AT_rich Low_complexity Low_complexity 1 35 0 5 591 318 254 55 0 chr3RHet 863713 863823 -1653684 - MICROPIA_LTR LTR Gypsy -91 385 270 5 591 471 256 130 74 chr3RHet 863906 864299 -1653208 - MICROPIA_I LTR Gypsy -12 4464 4050 5 591 852 223 248 3 chr3RHet 864373 864688 -1652819 - MICROPIA_I LTR Gypsy -852 3624 3233 5 591 348 194 207 7 chr3RHet 864672 864807 -1652700 - MICROPIA_I LTR Gypsy -1570 2906 2745 5 591 6563 85 25 11 chr3RHet 864959 866013 -1651494 + Gypsy11_I LTR Gypsy 1032 2099 -1425 5 591 352 100 100 0 chr3RHet 866058 866118 -1651389 + Gypsy11_I LTR Gypsy 2266 2331 -1193 5 591 22812 38 44 7 chr3RHet 866129 869147 -1648360 + DMCR1A LINE CR1 1 3128 -1342 5 591 13025 50 37 1 chr3RHet 869146 871931 -1645576 + STALKER4_I LTR Gypsy 2562 5447 -1083 5 591 2158 51 0 26 chr3RHet 871927 872231 -1645276 + STALKER4_I LTR Gypsy 5692 5987 -543 5 591 376 61 88 29 chr3RHet 872260 872362 -1645145 + Gypsy11_I LTR Gypsy 3368 3475 -49 5 591 1154 91 223 5 chr3RHet 872411 872630 -1644877 + Gypsy11_LTR LTR Gypsy 1 267 -185 5 591 1611 121 77 34 chr3RHet 872630 872982 -1644525 - ROVER-LTR_DM LTR Gypsy 0 367 1 5 591 1077 116 16 16 chr3RHet 872982 873158 -1644349 + Gypsy11_LTR LTR Gypsy 277 452 0 5 591 306 0 0 0 chr3RHet 873158 873192 -1644315 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 591 1270 110 11 105 chr3RHet 873787 874072 -1643435 - BATUMI_LTR LTR Pao 0 272 15 5 591 1046 72 7 13 chr3RHet 874097 874252 -1643255 - BATUMI_I LTR Pao 0 7963 7810 5 591 1131 66 0 6 chr3RHet 874255 874423 -1643084 - BATUMI_I LTR Pao -493 7470 7304 5 591 7247 150 63 8 chr3RHet 874459 876225 -1641282 - BATUMI_I LTR Pao -668 7246 5105 5 591 355 183 62 31 chr3RHet 876607 876703 -1640804 - Gypsy5_I LTR Gypsy 0 6509 6411 5 591 3729 326 49 32 chr3RHet 877295 881433 -1636074 - Gypsy5_I LTR Gypsy -925 5584 1376 5 591 426 348 13 13 chr3RHet 881517 881820 -1635687 - Gypsy5_I LTR Gypsy -5713 796 494 5 591 811 285 9 12 chr3RHet 881872 882199 -1635308 - Gypsy5_I LTR Gypsy -3961 2548 2223 5 591 2209 32 46 0 chr3RHet 882513 882798 -1634709 - Invader3_LTR LTR Gypsy 0 298 1 5 591 40348 12 13 1 chr3RHet 882798 887628 -1629879 - Invader3_I LTR Gypsy 0 4888 1 5 591 2224 39 42 0 chr3RHet 887628 887914 -1629593 - Invader3_LTR LTR Gypsy 0 298 1 5 591 224 233 33 11 chr3RHet 888176 888267 -1629240 + (TTTA)n Simple_repeat Simple_repeat 2 94 0 5 591 207 261 0 0 chr3RHet 888400 888469 -1629038 + T-rich Low_complexity Low_complexity 1 69 0 5 591 1696 15 0 51 chr3RHet 888966 889181 -1628326 - BATUMI_I LTR Pao -2855 5108 4905 5 591 21960 65 26 16 chr3RHet 889175 892321 -1625186 + DOC2_DM LINE Jockey 341 3516 -1224 5 591 180 0 0 0 chr3RHet 892849 892869 -1624638 + (A)n Simple_repeat Simple_repeat 1 20 0 5 591 270 337 50 40 chr3RHet 894622 894820 -1622687 + NOMAD_I LTR Gypsy 3158 3357 -3215 5 591 293 270 11 11 chr3RHet 895087 895177 -1622330 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 5 591 332 361 39 39 chr3RHet 896161 896420 -1621087 + Invader3_I LTR Gypsy 3888 4193 -695 5 591 6539 1 0 0 chr3RHet 897152 897856 -1619651 + DOC2_DM LINE Jockey 3556 4259 -534 5 591 1675 19 68 0 chr3RHet 897854 898060 -1619447 + DOC2_DM LINE Jockey 4574 4793 0 5 591 24991 48 53 16 chr3RHet 898131 901436 -1616071 - BATUMI_I LTR Pao -3643 4320 895 5 591 276 24 23 45 chr3RHet 901435 901479 -1616028 - BATUMI_I LTR Pao -914 7049 7007 5 591 254 148 19 0 chr3RHet 901486 901540 -1615967 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 591 1257 104 0 0 chr3RHet 901612 901785 -1615722 + DNAREP1_DM LINE Penelope 313 485 -109 5 591 645 183 3 101 chr3RHet 902248 902439 -1615068 - Gypsy8_LTR LTR Gypsy 0 304 70 5 591 387 54 36 0 chr3RHet 902513 902569 -1614938 + DNAREP1_DM LINE Penelope 537 594 0 5 591 1249 211 33 35 chr3RHet 902567 902935 -1614572 + DNAREP1_DM LINE Penelope 2 368 -226 5 591 27 49 0 0 chr3RHet 902988 903029 -1614478 + AT_rich Low_complexity Low_complexity 1 41 0 5 591 6221 48 33 6 chr3RHet 903065 903849 -1613658 - DOC3_DM LINE Jockey 0 4740 3936 5 591 8700 48 72 6 chr3RHet 903828 905544 -1611963 - DOC3_DM LINE Jockey -1079 3661 1785 5 591 932 78 0 15 chr3RHet 905524 905655 -1611852 - DOC3_DM LINE Jockey -3390 1350 1222 5 591 13502 61 21 0 chr3RHet 905654 907384 -1610123 - DMRT1C LINE R1 0 5443 3678 5 591 5111 88 18 0 chr3RHet 907377 908090 -1609417 - DMRT1C LINE R1 -2084 3359 2634 5 591 1696 61 0 0 chr3RHet 908151 908365 -1609142 - DMRT1C LINE R1 -2810 2633 2420 5 591 6489 51 68 9 chr3RHet 908369 909295 -1608212 - DOC3_DM LINE Jockey -3635 1105 31 5 591 725 253 69 52 chr3RHet 909341 909629 -1607878 - TOM_I LTR Gypsy -205 5907 5615 5 591 389 311 24 6 chr3RHet 910463 910628 -1606879 - DIVER2_I LTR Pao -2279 1868 1701 5 591 342 148 0 0 chr3RHet 910740 910794 -1606713 - DNAREP1_DM LINE Penelope -229 365 312 5 591 285 314 0 0 chr3RHet 911066 911171 -1606336 + (CGG)n Simple_repeat Simple_repeat 3 107 0 5 591 340 213 161 107 chr3RHet 911171 911413 -1606094 - Gypsy8_I LTR Gypsy -1153 3194 2940 5 591 330 73 273 0 chr3RHet 911558 911613 -1605894 + DNAREP1_DM LINE Penelope 525 594 0 5 591 9309 28 14 0 chr3RHet 911627 912717 -1604790 - PROTOP_A DNA P 0 1105 1 5 591 380 142 10 132 chr3RHet 912717 912850 -1604657 - Gypsy8_LTR LTR Gypsy -8 296 91 5 591 432 39 0 0 chr3RHet 912919 912971 -1604536 + DNAREP1_DM LINE Penelope 543 594 0 5 591 260 155 31 108 chr3RHet 912969 913034 -1604473 + DNAREP1_DM LINE Penelope 2 61 -533 5 591 269 362 131 4 chr3RHet 913302 913538 -1603969 - NOMAD_I LTR Gypsy -3782 2790 2525 5 591 322 263 82 72 chr3RHet 913975 914233 -1603274 + Gypsy6_I LTR Gypsy 1270 1339 -5673 5 73 12718 269 72 37 chr3RHet 914307 918773 -1598734 + Gypsy6_I LTR Gypsy 1916 7010 -2 5 592 3570 43 2 0 chr3RHet 918777 919196 -1598311 + Gypsy6A_LTR LTR Gypsy 1 420 0 5 592 366 198 74 41 chr3RHet 919403 919524 -1597983 + DNAREP1_DM LINE Penelope 194 318 -276 5 592 1689 32 135 4 chr3RHet 919525 919777 -1597730 + DMCR1A LINE CR1 2 286 -4184 5 592 13376 58 58 12 chr3RHet 919780 920962 -1596545 + DMCR1A LINE CR1 499 1770 -2700 5 592 612 0 0 0 chr3RHet 920962 921030 -1596477 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 592 13376 58 58 12 chr3RHet 921030 921619 -1595888 + DMCR1A LINE CR1 1771 2351 -2119 5 592 216 143 0 0 chr3RHet 921622 921664 -1595843 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 592 1716 67 3 3 chr3RHet 921665 921952 -1595555 - ROOA_I LTR Pao -1844 5005 4644 5 592 7393 52 56 1 chr3RHet 921949 923279 -1594228 + DMCR1A LINE CR1 2950 4351 -119 5 592 1749 159 27 36 chr3RHet 923275 923824 -1593683 + DNAREP1_DM LINE Penelope 86 486 -108 5 592 1093 182 60 14 chr3RHet 923824 924041 -1593466 - DMLTR5 LTR Gypsy 0 266 40 5 592 351 141 26 66 chr3RHet 924163 924239 -1593268 - HMSBEAGLE_I LTR Gypsy -124 6405 6333 5 592 4271 25 2 0 chr3RHet 924324 924838 -1592669 - Invader2_I LTR Gypsy -315 4277 3763 5 592 9080 36 70 0 chr3RHet 924836 927078 -1590429 - Invader2_I LTR Gypsy -1021 3571 1173 5 592 5119 35 9 0 chr3RHet 927075 927708 -1589799 - Invader2_I LTR Gypsy -3952 640 2 5 592 790 75 252 9 chr3RHet 927724 927938 -1589569 - Invader2_LTR LTR Gypsy 0 266 1 5 592 1159 152 312 10 chr3RHet 927938 928236 -1589271 - HMSBEAGLE_I LTR Gypsy -355 6174 5787 5 592 2088 111 25 0 chr3RHet 928238 928553 -1588954 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 5 592 7525 92 23 31 chr3RHet 928566 930529 -1586978 - HMSBEAGLE_I LTR Gypsy -3356 3173 1123 5 592 862 112 56 6 chr3RHet 930627 930807 -1586700 - HMSBEAGLE_I LTR Gypsy -5819 710 522 5 592 646 24 0 24 chr3RHet 930809 930894 -1586613 - Invader2_I LTR Gypsy -3337 1255 1173 5 592 5117 36 8 6 chr3RHet 930891 931529 -1585978 - Invader2_I LTR Gypsy -3952 640 2 5 592 797 78 243 0 chr3RHet 931545 931759 -1585748 - Invader2_LTR LTR Gypsy 0 266 1 5 592 1226 149 301 13 chr3RHet 931759 932058 -1585449 - HMSBEAGLE_I LTR Gypsy -356 6173 5787 5 592 2096 105 29 0 chr3RHet 932060 932374 -1585133 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 5 592 7529 94 23 30 chr3RHet 932387 934349 -1583158 - HMSBEAGLE_I LTR Gypsy -3356 3173 1122 5 592 1048 118 47 5 chr3RHet 934447 934659 -1582848 - HMSBEAGLE_I LTR Gypsy -5819 710 490 5 592 245 243 0 14 chr3RHet 934767 934838 -1582669 - TIRANT_LTR LTR Gypsy -107 310 241 5 592 266 105 0 0 chr3RHet 934836 934874 -1582633 - HMSBEAGLE_I LTR Gypsy -132 6397 6360 5 592 777 108 0 129 chr3RHet 935083 935253 -1582254 - HMSBEAGLE_I LTR Gypsy -163 6366 6219 5 592 1837 77 25 55 chr3RHet 935286 935560 -1581947 - Invader2_LTR LTR Gypsy 0 266 1 5 592 6937 20 0 6 chr3RHet 935560 936395 -1581112 - Invader2_I LTR Gypsy 0 4592 3763 5 592 8847 27 72 1 chr3RHet 936393 937980 -1579527 - Invader2_I LTR Gypsy -1021 3571 1873 5 592 9298 32 49 11 chr3RHet 937967 939141 -1578366 - Invader2_I LTR Gypsy -3373 1219 2 5 592 811 74 243 0 chr3RHet 939157 939371 -1578136 - Invader2_LTR LTR Gypsy 0 266 1 5 592 688 154 317 10 chr3RHet 939371 939660 -1577847 - HMSBEAGLE_I LTR Gypsy -355 6174 5797 5 592 2340 103 24 0 chr3RHet 939672 940012 -1577495 - HMSBEAGLE_I LTR Gypsy -901 5628 5281 5 592 7555 94 23 30 chr3RHet 940022 941984 -1575523 - HMSBEAGLE_I LTR Gypsy -3356 3173 1122 5 592 1048 118 47 5 chr3RHet 942082 942294 -1575213 - HMSBEAGLE_I LTR Gypsy -5819 710 490 5 592 266 105 0 0 chr3RHet 942471 942509 -1574998 - HMSBEAGLE_I LTR Gypsy -132 6397 6360 5 592 777 108 0 129 chr3RHet 942718 942888 -1574619 - HMSBEAGLE_I LTR Gypsy -163 6366 6219 5 592 1837 77 25 55 chr3RHet 942921 943195 -1574312 - Invader2_LTR LTR Gypsy 0 266 1 5 592 6850 24 1 4 chr3RHet 943195 944027 -1573480 - Invader2_I LTR Gypsy 0 4592 3763 5 592 8297 28 60 2 chr3RHet 944025 945630 -1571877 - Invader2_I LTR Gypsy -1021 3571 1873 5 592 8698 35 48 10 chr3RHet 945617 946791 -1570716 - Invader2_I LTR Gypsy -3373 1219 2 5 592 1780 77 27 0 chr3RHet 946807 947066 -1570441 - Invader2_LTR LTR Gypsy 0 266 1 5 592 632 163 313 10 chr3RHet 947066 947356 -1570151 - HMSBEAGLE_I LTR Gypsy -355 6174 5797 5 592 2111 109 24 0 chr3RHet 947367 947707 -1569800 - HMSBEAGLE_I LTR Gypsy -901 5628 5281 5 592 4781 95 32 0 chr3RHet 947719 948433 -1569074 - HMSBEAGLE_I LTR Gypsy -3358 3171 2435 5 592 228 118 0 0 chr3RHet 948482 948516 -1568991 - HMSBEAGLE_I LTR Gypsy -132 6397 6364 5 592 2820 128 61 53 chr3RHet 948716 949346 -1568161 - HMSBEAGLE_I LTR Gypsy -163 6366 5732 5 592 2411 19 148 0 chr3RHet 949346 949494 -1568013 - Stalker3_LTR LTR Gypsy 0 372 225 5 592 207 0 0 0 chr3RHet 949494 949517 -1567990 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 5 592 2411 19 148 0 chr3RHet 949517 949692 -1567815 - Stalker3_LTR LTR Gypsy -148 224 2 5 592 337 51 88 6 chr3RHet 949692 949773 -1567734 - STALKER4_I LTR Gypsy 0 6530 6491 5 592 39 0 0 0 chr3RHet 949788 949827 -1567680 + AT_rich Low_complexity Low_complexity 1 39 0 5 592 2297 0 0 0 chr3RHet 949858 950134 -1567373 - Copia_LTR LTR Copia 0 276 1 5 592 4483 2 0 0 chr3RHet 950134 950655 -1566852 - Copia_I LTR Copia 0 4593 4073 5 592 24017 2 1 0 chr3RHet 965655 968438 -1549069 + DOC LINE Jockey 1938 4722 -3 5 592 3036 131 80 15 chr3RHet 968493 969105 -1548402 - Stalker2_I LTR Gypsy -6509 893 242 5 592 291 49 0 0 chr3RHet 969303 969344 -1548163 - Stalker2_I LTR Gypsy -7361 41 1 5 592 2745 23 63 0 chr3RHet 969344 969492 -1548015 - Stalker3_LTR LTR Gypsy 0 372 225 5 592 207 0 0 0 chr3RHet 969492 969515 -1547992 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 5 592 2745 23 63 0 chr3RHet 969515 969716 -1547791 - Stalker3_LTR LTR Gypsy -148 224 2 5 592 3151 72 43 13 chr3RHet 969716 970180 -1547327 - HMSBEAGLE_I LTR Gypsy -794 5735 5258 5 592 3850 90 4 0 chr3RHet 970147 970692 -1546815 - HMSBEAGLE_I LTR Gypsy -1691 4838 4292 5 592 8481 42 7 1 chr3RHet 970679 971809 -1545698 - Invader2_I LTR Gypsy -2283 2309 1173 5 592 4794 35 9 0 chr3RHet 971806 972439 -1545068 - Invader2_I LTR Gypsy -3952 640 2 5 592 1465 93 42 4 chr3RHet 972455 972693 -1544814 - Invader2_LTR LTR Gypsy 0 266 20 5 592 273 152 0 0 chr3RHet 972702 972748 -1544759 - HMSBEAGLE_I LTR Gypsy -988 5541 5496 5 592 4659 100 54 39 chr3RHet 972751 973693 -1543814 - HMSBEAGLE_I LTR Gypsy -4026 2503 1449 5 592 866 120 180 52 chr3RHet 973699 973893 -1543614 - HMSBEAGLE_I LTR Gypsy -6043 486 268 5 592 465 188 10 10 chr3RHet 973891 973993 -1543514 - DMLTR5 LTR Gypsy -120 146 45 5 592 548 138 0 0 chr3RHet 974243 974337 -1543170 + DNAREP1_DM LINE Penelope 501 594 0 5 592 5678 83 81 3 chr3RHet 974385 975356 -1542151 + G5_DM LINE Jockey 407 1453 -3403 5 592 353 0 0 0 chr3RHet 975354 975394 -1542113 + G5_DM LINE Jockey 2249 2288 -2568 5 592 4070 40 4 0 chr3RHet 975396 975915 -1541592 + G5_DM LINE Jockey 2654 3174 -1682 5 592 1483 50 50 0 chr3RHet 975921 976122 -1541385 + G5_DM LINE Jockey 3333 3543 -1313 5 592 1053 51 29 0 chr3RHet 976115 976253 -1541254 + G5_DM LINE Jockey 3751 3892 -964 5 592 1389 75 154 0 chr3RHet 976252 976492 -1541015 + G5_DM LINE Jockey 4579 4855 -1 5 592 6606 60 112 5 chr3RHet 976558 977772 -1539735 + TRANSIB3 DNA Transib 2 1345 -1538 5 592 226 114 68 0 chr3RHet 977775 977819 -1539688 + TRANSIB3 DNA Transib 1591 1637 -1246 5 592 1592 39 0 0 chr3RHet 977819 978022 -1539485 - FROGGER_LTR LTR Copia 0 203 1 5 592 1944 20 0 42 chr3RHet 978022 978283 -1539224 - FROGGER_I LTR Copia 0 2077 1828 5 592 10507 31 12 10 chr3RHet 978284 979623 -1537884 - FROGGER_I LTR Copia -447 1630 289 5 592 1214 284 43 32 chr3RHet 979795 980620 -1536887 - FROGGER_I LTR Copia -1796 281 129 5 592 231 300 0 0 chr3RHet 981306 981386 -1536121 - Copia2_I LTR Copia -3490 672 593 5 592 1081 37 0 0 chr3RHet 981879 982015 -1535492 - FROGGER_I LTR Copia -1941 136 1 5 592 811 29 0 0 chr3RHet 982015 982118 -1535389 - FROGGER_LTR LTR Copia 0 203 101 5 592 5113 337 37 33 chr3RHet 983581 987648 -1529859 + GTWIN_I LTR Gypsy 804 4887 -1534 5 592 4451 334 18 11 chr3RHet 1002751 1005090 -1512417 + GTWIN_I LTR Gypsy 2533 4887 -1534 5 592 868 19 0 0 chr3RHet 1006488 1006592 -1510915 - FROGGER_LTR LTR Copia -99 104 1 5 592 3089 90 86 0 chr3RHet 1006593 1007083 -1510424 + TRANSIB3 DNA Transib 1632 2163 -720 5 592 1000 77 45 0 chr3RHet 1007083 1007239 -1510268 + ROVER-LTR_DM LTR Gypsy 1 163 -204 5 592 2267 350 24 14 chr3RHet 1007250 1008793 -1508714 + GTWIN_I LTR Gypsy 3329 4887 -1534 5 592 868 19 0 0 chr3RHet 1010191 1010295 -1507212 - FROGGER_LTR LTR Copia -99 104 1 5 592 3089 90 86 0 chr3RHet 1010296 1010786 -1506721 + TRANSIB3 DNA Transib 1632 2163 -720 5 592 1830 117 42 25 chr3RHet 1010786 1011147 -1506360 + ROVER-LTR_DM LTR Gypsy 1 367 0 5 592 355 190 13 0 chr3RHet 1011147 1011226 -1506281 + ROVER-I_DM LTR Gypsy 1 80 -6504 5 592 217 308 6 19 chr3RHet 1011359 1011518 -1505989 + A-rich Low_complexity Low_complexity 2 158 0 5 592 17159 220 36 13 chr3RHet 1011538 1016081 -1501426 + ROVER-I_DM LTR Gypsy 284 4933 -1651 5 592 705 24 0 0 chr3RHet 1016077 1016162 -1501345 - PROTOP_A DNA P -1020 85 1 5 592 1005 152 81 20 chr3RHet 1016162 1016410 -1501097 + ROVER-I_DM LTR Gypsy 6322 6584 0 5 592 1821 117 42 25 chr3RHet 1016410 1016771 -1500736 + ROVER-LTR_DM LTR Gypsy 1 367 0 5 592 22 35 0 0 chr3RHet 1016882 1016911 -1500596 + AT_rich Low_complexity Low_complexity 1 29 0 5 592 238 161 18 18 chr3RHet 1017340 1017397 -1500110 + DMCR1A LINE CR1 126 182 -4288 5 592 302 236 110 0 chr3RHet 1017401 1017528 -1499979 + DMCR1A LINE CR1 352 492 -3978 5 592 234 289 0 0 chr3RHet 1017875 1017927 -1499580 + (CGGA)n Simple_repeat Simple_repeat 4 55 0 5 592 279 200 0 0 chr3RHet 1017928 1017983 -1499524 + DNAREP1_DM LINE Penelope 432 486 -108 5 592 24 32 0 0 chr3RHet 1018004 1018035 -1499472 + AT_rich Low_complexity Low_complexity 1 31 0 5 592 9062 22 0 0 chr3RHet 1018318 1019423 -1498084 - PROTOP_A DNA P 0 1105 1 5 592 623 318 32 19 chr3RHet 1019762 1020140 -1497367 - DIVER2_I LTR Pao -788 3359 2977 5 592 416 334 47 41 chr3RHet 1021509 1021852 -1495655 - DIVER2_I LTR Pao -1838 2309 1965 5 592 747 122 9 0 chr3RHet 1022095 1022210 -1495297 - G3_DM LINE Jockey -4026 579 464 5 592 2495 115 73 43 chr3RHet 1022249 1022712 -1494795 - G3_DM LINE Jockey -4026 579 103 5 592 8331 22 0 0 chr3RHet 1023378 1024399 -1493108 - PROTOP_A DNA P -84 1021 1 5 592 623 318 32 19 chr3RHet 1024738 1025116 -1492391 - DIVER2_I LTR Pao -788 3359 2977 5 592 416 334 47 41 chr3RHet 1026485 1026828 -1490679 - DIVER2_I LTR Pao -1838 2309 1965 5 592 747 122 9 0 chr3RHet 1027071 1027186 -1490321 - G3_DM LINE Jockey -4026 579 464 5 592 2495 115 73 43 chr3RHet 1027225 1027688 -1489819 - G3_DM LINE Jockey -4026 579 103 5 592 1144 97 0 0 chr3RHet 1028496 1028661 -1488846 - DMRT1C LINE R1 -4373 1070 906 5 592 545 80 397 0 chr3RHet 1028661 1028812 -1488695 - DMRT1C LINE R1 -4743 700 490 5 592 13817 59 38 1 chr3RHet 1028818 1030771 -1486736 - I_DM LINE I -2199 4032 2006 5 592 3467 33 2 0 chr3RHet 1030771 1031198 -1486309 - ROO_LTR LTR Pao 0 428 1 5 592 11772 23 9 15 chr3RHet 1031198 1032719 -1484788 - ROO_I LTR Pao 0 8256 6745 5 592 45310 15 30 5 chr3RHet 1032707 1038380 -1479127 - ROO_I LTR Pao -2442 5814 1 5 592 3464 33 2 0 chr3RHet 1038380 1038807 -1478700 - ROO_LTR LTR Pao 0 428 1 5 592 12730 62 9 19 chr3RHet 1038807 1040748 -1476759 - I_DM LINE I -4221 2010 89 5 592 264 156 46 44 chr3RHet 1040790 1040932 -1476575 + Gypsy12A_LTR LTR Gypsy 928 1101 -1179 5 592 796 65 0 75 chr3RHet 1040955 1041088 -1476419 + Gypsy12A_LTR LTR Gypsy 2156 2278 -2 5 592 231 218 18 0 chr3RHet 1041088 1041141 -1476366 + DNAREP1_DM LINE Penelope 541 594 0 5 592 436 95 0 0 chr3RHet 1041450 1041513 -1475994 + DNAREP1_DM LINE Penelope 5 67 -527 5 592 34 0 0 0 chr3RHet 1041513 1041547 -1475960 + AT_rich Low_complexity Low_complexity 1 34 0 5 592 7258 45 3 2 chr3RHet 1041563 1042485 -1475022 - Baggins1 LINE LOA 0 5453 4531 5 592 11734 47 45 0 chr3RHet 1042481 1044030 -1473477 - Baggins1 LINE LOA -1250 4203 2585 5 592 6212 48 20 1 chr3RHet 1044028 1044827 -1472680 - Baggins1 LINE LOA -3041 2412 1599 5 592 4155 39 0 2 chr3RHet 1044811 1045349 -1472158 - Baggins1 LINE LOA -4418 1035 499 5 592 2663 34 80 0 chr3RHet 1045364 1045715 -1471792 - Baggins1 LINE LOA -5073 380 2 5 592 38 81 0 0 chr3RHet 1046214 1046301 -1471206 + AT_rich Low_complexity Low_complexity 1 87 0 5 592 28 0 0 0 chr3RHet 1046723 1046751 -1470756 + AT_rich Low_complexity Low_complexity 1 28 0 5 592 27 49 0 0 chr3RHet 1047381 1047422 -1470085 + AT_rich Low_complexity Low_complexity 1 41 0 5 592 246 103 0 0 chr3RHet 1048123 1048162 -1469345 - BARI1 DNA Tc1 -1708 42 4 5 9 3974 67 22 3 chr3RHet 1048131 1048714 -1468793 + IDEFIX_LTR LTR Gypsy 1 594 0 5 593 2724 23 17 0 chr3RHet 1048955 1049302 -1468205 - FW_DM LINE Jockey 0 4692 4340 5 593 4668 16 50 0 chr3RHet 1049294 1049870 -1467637 + G5_DM LINE Jockey 1568 2172 -2684 5 593 5022 25 0 0 chr3RHet 1049866 1050478 -1467029 + G5_DM LINE Jockey 2535 3146 -1710 5 593 32492 11 0 6 chr3RHet 1050478 1054367 -1463140 - FW_DM LINE Jockey -360 4332 466 5 593 1072 50 0 0 chr3RHet 1054647 1054786 -1462721 + IDEFIX_I LTR Gypsy 1 139 -5489 5 593 363 42 0 0 chr3RHet 1054791 1054839 -1462668 + IDEFIX_I LTR Gypsy 999 1046 -4582 5 593 500 59 0 0 chr3RHet 1054837 1054905 -1462602 + G5_DM LINE Jockey 904 971 -3885 5 593 3324 34 0 0 chr3RHet 1054900 1055309 -1462198 + G5_DM LINE Jockey 1078 1486 -3370 5 593 7096 133 67 61 chr3RHet 1055307 1056840 -1460667 + G5_DM LINE Jockey 1604 3146 -1710 5 593 34707 11 0 3 chr3RHet 1056840 1060719 -1456788 - FW_DM LINE Jockey -360 4332 466 5 593 7507 69 38 19 chr3RHet 1060946 1062026 -1455481 + IDEFIX_I LTR Gypsy 1 1048 -4580 5 593 528 71 0 0 chr3RHet 1062022 1062092 -1455415 + G5_DM LINE Jockey 904 973 -3883 5 593 16462 102 43 37 chr3RHet 1062085 1064929 -1452578 + G5_DM LINE Jockey 1 3678 -1178 5 593 20394 65 55 12 chr3RHet 1064930 1068065 -1449442 + IDEFIX_I LTR Gypsy 1252 4523 -1105 5 593 4171 8 0 61 chr3RHet 1068065 1068572 -1448935 + MICROPIA_LTR LTR Gypsy 1 476 0 5 593 2289 41 0 0 chr3RHet 1068572 1068838 -1448669 + MICROPIA_I LTR Gypsy 1 266 -4210 5 593 16137 14 2 4 chr3RHet 1068821 1070637 -1446870 + MICROPIA_I LTR Gypsy 2665 4476 0 5 593 4127 13 0 61 chr3RHet 1070637 1071144 -1446363 + MICROPIA_LTR LTR Gypsy 1 476 0 5 593 39920 9 13 9 chr3RHet 1071144 1075604 -1441903 + MICROPIA_I LTR Gypsy 1 4476 0 5 593 4171 8 0 61 chr3RHet 1075604 1076111 -1441396 + MICROPIA_LTR LTR Gypsy 1 476 0 5 593 2289 41 0 0 chr3RHet 1076111 1076377 -1441130 + MICROPIA_I LTR Gypsy 1 266 -4210 5 593 16109 14 2 4 chr3RHet 1076360 1078176 -1439331 + MICROPIA_I LTR Gypsy 2665 4476 0 5 593 4139 11 0 61 chr3RHet 1078176 1078683 -1438824 + MICROPIA_LTR LTR Gypsy 1 476 0 5 593 2266 45 0 0 chr3RHet 1078683 1078949 -1438558 + MICROPIA_I LTR Gypsy 1 266 -4210 5 593 16115 14 2 4 chr3RHet 1078932 1080748 -1436759 + MICROPIA_I LTR Gypsy 2665 4476 0 5 593 4127 13 0 61 chr3RHet 1080748 1081255 -1436252 + MICROPIA_LTR LTR Gypsy 1 476 0 5 593 40044 9 12 9 chr3RHet 1081255 1085719 -1431788 + MICROPIA_I LTR Gypsy 1 4476 0 5 593 4127 13 0 61 chr3RHet 1085719 1086226 -1431281 + MICROPIA_LTR LTR Gypsy 1 476 0 5 593 1909 87 0 0 chr3RHet 1086226 1086490 -1431017 + IDEFIX_I LTR Gypsy 4520 4783 -845 5 593 16903 11 0 4 chr3RHet 1086485 1088362 -1429145 + MICROPIA_I LTR Gypsy 2608 4476 0 5 593 4184 6 0 61 chr3RHet 1088362 1088869 -1428638 + MICROPIA_LTR LTR Gypsy 1 476 0 5 593 3838 78 17 0 chr3RHet 1088869 1089391 -1428116 + IDEFIX_I LTR Gypsy 4520 5050 -578 5 593 1355 60 194 53 chr3RHet 1089388 1089635 -1427872 + IDEFIX_LTR LTR Gypsy 313 594 0 5 593 37 39 0 0 chr3RHet 1089639 1089690 -1427817 + AT_rich Low_complexity Low_complexity 1 51 0 5 593 495 72 0 0 chr3RHet 1089976 1090045 -1427462 - TLD2 Unknown Unknown 0 218 150 5 593 23 0 0 0 chr3RHet 1090233 1090256 -1427251 + AT_rich Low_complexity Low_complexity 1 23 0 5 593 420 281 70 59 chr3RHet 1090320 1090668 -1426839 - Gypsy7_I LTR Gypsy -2921 3499 2987 5 593 930 282 86 15 chr3RHet 1090773 1091248 -1426259 + ROVER-I_DM LTR Gypsy 656 1164 -5420 5 593 544 310 53 55 chr3RHet 1091255 1091746 -1425761 + ROVER-I_DM LTR Gypsy 1393 1882 -4702 5 593 269 295 150 30 chr3RHet 1091969 1092235 -1425272 + DM176_I LTR Gypsy 1831 2128 -4292 5 593 1377 30 12 6 chr3RHet 1092207 1092374 -1425133 - TLD3 Unknown Unknown -3 169 2 5 593 8235 269 28 14 chr3RHet 1092355 1095009 -1422498 + ROVER-I_DM LTR Gypsy 2579 5269 -1315 5 593 1665 166 5 100 chr3RHet 1095004 1095423 -1422084 + DM297_I LTR Gypsy 5490 5866 -301 5 593 1792 39 0 0 chr3RHet 1095423 1095631 -1421876 + PROTOP_A DNA P 1 208 -897 5 593 4865 36 3 2 chr3RHet 1095630 1096219 -1421288 + PROTOP_A DNA P 516 1105 0 5 593 1677 163 39 0 chr3RHet 1096219 1096521 -1420986 + DM176_I LTR Gypsy 6107 6420 0 5 593 340 190 43 138 chr3RHet 1096607 1096723 -1420784 + DMTOM1_LTR LTR Gypsy 190 294 -213 5 593 514 196 124 40 chr3RHet 1096843 1097039 -1420468 + DMTOM1_LTR LTR Gypsy 284 488 -19 5 593 379 155 0 27 chr3RHet 1097030 1097103 -1420404 + DMTOM1_LTR LTR Gypsy 340 410 0 5 593 24 67 0 0 chr3RHet 1097127 1097172 -1420335 + AT_rich Low_complexity Low_complexity 1 45 0 5 593 2542 105 239 9 chr3RHet 1097191 1097637 -1419870 - QUASIMODO_LTR LTR Gypsy -110 548 1 5 593 277 111 56 0 chr3RHet 1097640 1097694 -1419813 - TLD2 Unknown Unknown -161 57 1 5 593 474 265 122 46 chr3RHet 1097653 1098025 -1419482 - Gypsy4_I LTR Gypsy -3523 2897 2352 5 593 32 43 0 0 chr3RHet 1098183 1098229 -1419278 + AT_rich Low_complexity Low_complexity 1 46 0 5 593 22 35 0 0 chr3RHet 1098402 1098431 -1419076 + AT_rich Low_complexity Low_complexity 1 29 0 5 593 200 204 0 0 chr3RHet 1098768 1098812 -1418695 + T-rich Low_complexity Low_complexity 5 48 0 5 593 3602 66 77 2 chr3RHet 1098852 1099790 -1417717 - DMCR1A LINE CR1 -458 4012 2892 5 593 8970 61 47 3 chr3RHet 1099775 1100937 -1416570 - DMCR1A LINE CR1 -1760 2710 1499 5 593 1592 112 4 4 chr3RHet 1100943 1101194 -1416313 - DMCR1A LINE CR1 -4213 257 7 5 593 23 33 0 0 chr3RHet 1101229 1101259 -1416248 + AT_rich Low_complexity Low_complexity 1 30 0 5 593 186 193 0 0 chr3RHet 1101284 1101341 -1416166 + (TTA)n Simple_repeat Simple_repeat 2 58 0 5 593 29 28 0 0 chr3RHet 1101729 1101765 -1415742 + AT_rich Low_complexity Low_complexity 1 36 0 5 593 25 51 0 0 chr3RHet 1101835 1101874 -1415633 + AT_rich Low_complexity Low_complexity 1 39 0 5 593 679 98 623 0 chr3RHet 1101988 1102175 -1415332 + DNAREP1_DM LINE Penelope 292 594 0 5 593 1145 160 37 32 chr3RHet 1102227 1102523 -1414984 + DNAREP1_DM LINE Penelope 90 332 -262 5 593 349 121 17 0 chr3RHet 1102518 1102576 -1414931 + DNAREP1_DM LINE Penelope 536 594 0 5 593 30 0 0 0 chr3RHet 1102608 1102638 -1414869 + AT_rich Low_complexity Low_complexity 1 30 0 5 593 2628 45 0 0 chr3RHet 1102640 1102948 -1414559 + DIVER2_LTR LTR Pao 1 308 -77 5 593 15184 34 63 12 chr3RHet 1103041 1104954 -1412553 + DIVER2_I LTR Pao 433 2442 -1705 5 593 14591 27 18 8 chr3RHet 1105984 1107697 -1409810 + DIVER2_I LTR Pao 2417 4147 0 5 593 3234 30 0 0 chr3RHet 1107703 1108070 -1409437 + DIVER2_LTR LTR Pao 18 384 -1 5 593 865 53 9 0 chr3RHet 1108172 1108286 -1409221 + DOC4_DM LINE Jockey 486 600 -2191 5 593 5840 56 3 3 chr3RHet 1108265 1108994 -1408513 + DOC4_DM LINE Jockey 844 1572 -1219 5 593 2267 172 16 16 chr3RHet 1109046 1109489 -1408018 + DOC4_DM LINE Jockey 5 447 -2344 5 593 9091 25 38 3 chr3RHet 1109667 1111441 -1406066 + FW3_DM LINE Jockey 1 1835 -1297 5 593 2452 31 0 0 chr3RHet 1111437 1111726 -1405781 + FW3_DM LINE Jockey 1992 2280 -852 5 593 2287 152 20 13 chr3RHet 1111748 1112375 -1405132 + DOC4_DM LINE Jockey 1154 2035 -756 5 593 7339 41 99 1 chr3RHet 1112420 1113470 -1404037 - PROTOP_B DNA P 0 1153 1 5 593 268 300 30 30 chr3RHet 1113490 1113695 -1403812 + FW_DM LINE Jockey 2407 2681 -2059 5 593 2522 0 0 0 chr3RHet 1115385 1115684 -1401823 - G6_DM LINE Jockey 0 2042 1744 5 593 13970 2 0 0 chr3RHet 1115685 1117317 -1400190 - G6_DM LINE Jockey -410 1632 1 5 593 1274 63 102 0 chr3RHet 1118313 1118515 -1398992 - DOC5_DM LINE Jockey -4339 343 121 5 593 633 124 38 0 chr3RHet 1118515 1118620 -1398887 - Invader1_LTR LTR Gypsy 0 423 315 5 593 2334 98 19 3 chr3RHet 1118639 1119006 -1398501 - Invader1_I LTR Gypsy -95 3091 2719 5 593 680 0 119 0 chr3RHet 1119151 1119538 -1397969 + (TTA)n Simple_repeat Simple_repeat 1 433 0 5 593 1826 123 136 5 chr3RHet 1119768 1120137 -1397370 + DNAREP1_DM LINE Penelope 178 594 0 5 593 1162 92 6 0 chr3RHet 1120135 1120309 -1397198 - TC1-2_DM DNA Tc1 -238 1406 1232 5 593 2731 90 82 8 chr3RHet 1120350 1120863 -1396644 - I_DM LINE I -4301 1930 1380 5 593 4995 114 104 3 chr3RHet 1120860 1121812 -1395695 - I_DM LINE I -5085 1146 99 5 593 8500 58 63 1 chr3RHet 1121867 1123042 -1394465 + Baggins1 LINE LOA 4205 5452 -1 5 593 3820 132 123 3 chr3RHet 1123072 1124056 -1393451 - I_DM LINE I -758 5473 4372 5 593 2044 178 43 6 chr3RHet 1124063 1124549 -1392958 - I_DM LINE I -2266 3965 3462 5 593 1830 120 136 5 chr3RHet 1124681 1125050 -1392457 + DNAREP1_DM LINE Penelope 178 594 0 5 593 1162 92 6 0 chr3RHet 1125048 1125222 -1392285 - TC1-2_DM DNA Tc1 -238 1406 1232 5 593 2754 88 82 8 chr3RHet 1125263 1125776 -1391731 - I_DM LINE I -4301 1930 1380 5 593 6062 70 80 2 chr3RHet 1125773 1126745 -1390762 - I_DM LINE I -5085 1146 99 5 593 8587 58 58 1 chr3RHet 1126800 1127980 -1389527 + Baggins1 LINE LOA 4205 5452 -1 5 593 4331 102 123 3 chr3RHet 1128010 1128995 -1388512 - I_DM LINE I -758 5473 4371 5 593 3048 95 30 0 chr3RHet 1129014 1129489 -1388018 - I_DM LINE I -2281 3950 3462 5 593 1783 115 171 3 chr3RHet 1129621 1129978 -1387529 + DNAREP1_DM LINE Penelope 178 594 0 5 593 1180 86 6 0 chr3RHet 1129976 1130150 -1387357 - TC1-2_DM DNA Tc1 -238 1406 1232 5 593 21 0 0 0 chr3RHet 1130310 1130331 -1387176 + AT_rich Low_complexity Low_complexity 1 21 0 5 593 37 0 0 0 chr3RHet 1130395 1130432 -1387075 + AT_rich Low_complexity Low_complexity 1 37 0 5 593 303 28 0 0 chr3RHet 1131125 1131161 -1386346 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 593 27 29 0 0 chr3RHet 1134506 1134540 -1382967 + AT_rich Low_complexity Low_complexity 1 34 0 5 593 21 0 0 0 chr3RHet 1134793 1134814 -1382693 + AT_rich Low_complexity Low_complexity 1 21 0 5 593 27 81 0 0 chr3RHet 1135059 1135121 -1382386 + AT_rich Low_complexity Low_complexity 1 62 0 5 593 429 168 481 13 chr3RHet 1135591 1135743 -1381764 + DMCR1A LINE CR1 1246 1468 -3002 5 593 692 180 36 0 chr3RHet 1135979 1136146 -1381361 + DNAREP1_DM LINE Penelope 67 239 -355 5 593 35 24 0 0 chr3RHet 1136206 1136248 -1381259 + AT_rich Low_complexity Low_complexity 1 42 0 5 593 326 87 0 0 chr3RHet 1136396 1136442 -1381065 - DNAREP1_DM LINE Penelope -538 56 11 5 593 1008 191 60 77 chr3RHet 1137438 1137804 -1379703 + Gypsy8_LTR LTR Gypsy 7 304 0 5 593 311 184 312 11 chr3RHet 1137804 1137980 -1379527 + Gypsy8_I LTR Gypsy 1 229 -4118 5 593 840 60 17 0 chr3RHet 1138573 1138689 -1378818 - DMCR1A LINE CR1 0 4470 4353 5 593 9488 53 112 18 chr3RHet 1138691 1141147 -1376360 - DMCR1A LINE CR1 -236 4234 1547 5 593 1656 111 80 13 chr3RHet 1141148 1141449 -1376058 + MAX_LTR LTR Pao 1 321 0 5 593 10152 92 39 150 chr3RHet 1141463 1144540 -1372967 + MAX_I LTR Pao 2 2559 -5355 5 593 4795 24 2 0 chr3RHet 1145338 1145924 -1371583 + PROTOP DNA P 1 587 -3893 5 593 22671 18 6 0 chr3RHet 1145933 1148737 -1368770 + PROTOP DNA P 1662 4480 0 5 593 294 320 67 40 chr3RHet 1150786 1151338 -1366169 + Invader3_I LTR Gypsy 2180 2596 -1885 5 593 346 300 7 7 chr3RHet 1151351 1151492 -1366015 + Invader3_I LTR Gypsy 2889 3029 -1859 5 593 335 296 19 19 chr3RHet 1151778 1151940 -1365567 + MDG3_I LTR Gypsy 3263 3424 -1562 5 593 314 328 16 11 chr3RHet 1152276 1152467 -1365040 + BLASTOPIA_I LTR Gypsy 3541 3732 -749 5 593 227 337 112 8 chr3RHet 1152938 1153189 -1364318 + BLASTOPIA_I LTR Gypsy 4204 4480 -1 5 593 5407 38 13 0 chr3RHet 1153492 1154175 -1363332 + MAX_I LTR Pao 2553 3244 -4670 5 593 700 20 267 0 chr3RHet 1154176 1154277 -1363230 + MAX_I LTR Pao 3433 3560 -4354 5 593 11443 34 9 22 chr3RHet 1154275 1155792 -1361715 + MAX_I LTR Pao 6418 7913 -1 5 593 1697 101 80 13 chr3RHet 1155795 1156096 -1361411 + MAX_LTR LTR Pao 1 321 0 5 593 675 45 0 0 chr3RHet 1156096 1156184 -1361323 - DMCR1A LINE CR1 -2920 1550 1463 5 593 1727 38 0 0 chr3RHet 1156180 1156391 -1361116 - DMCR1A LINE CR1 -3287 1183 973 5 593 1981 63 234 33 chr3RHet 1156383 1156770 -1360737 - DMCR1A LINE CR1 -3805 665 200 5 593 4536 31 10 2 chr3RHet 1156779 1157368 -1360139 - IDEFIX_LTR LTR Gypsy 0 594 1 5 593 1170 83 11 0 chr3RHet 1157372 1157552 -1359955 - DMCR1A LINE CR1 -4287 183 2 5 593 1220 105 0 114 chr3RHet 1157578 1157815 -1359692 + G3_DM LINE Jockey 371 580 -4025 5 593 502 351 21 69 chr3RHet 1157585 1158118 -1359389 + DIVER2_I LTR Pao 1320 1826 -2321 5 593 3293 60 11 0 chr3RHet 1158202 1158649 -1358858 - Gypsy11_LTR LTR Gypsy 0 452 1 5 593 303 111 0 36 chr3RHet 1158649 1158694 -1358813 - DM412 LTR Gypsy -110 6787 6745 5 593 650 323 39 28 chr3RHet 1159100 1159489 -1358018 + MICROPIA_I LTR Gypsy 1 393 -4083 5 593 414 327 46 0 chr3RHet 1159508 1159725 -1357782 + MICROPIA_I LTR Gypsy 907 1133 -3343 5 593 4900 313 16 17 chr3RHet 1159708 1161938 -1355569 + MICROPIA_I LTR Gypsy 937 3850 -626 5 593 21 82 0 0 chr3RHet 1162534 1162583 -1354924 + AT_rich Low_complexity Low_complexity 1 49 0 5 593 13376 175 29 25 chr3RHet 1162998 1166600 -1350907 - DM412 LTR Gypsy -343 6554 2579 5 593 21 0 0 0 chr3RHet 1166626 1166647 -1350860 + AT_rich Low_complexity Low_complexity 1 21 0 5 593 502 83 0 45 chr3RHet 1166647 1166735 -1350772 - Gypsy11_I LTR Gypsy -983 2541 2458 5 593 4973 57 122 37 chr3RHet 1166732 1167566 -1349941 - Gypsy11_I LTR Gypsy -1229 2295 1391 5 593 1924 80 70 43 chr3RHet 1167566 1167893 -1349614 - Gypsy9_LTR LTR Gypsy 0 336 1 5 593 6516 67 91 32 chr3RHet 1167893 1168954 -1348553 - Gypsy9_I LTR Gypsy 0 4677 3555 5 593 1567 309 37 23 chr3RHet 1169001 1169815 -1347692 - Gypsy4_I LTR Gypsy -1536 4752 3928 5 593 4816 2 0 0 chr3RHet 1169815 1170373 -1347134 + ACCORD_LTR LTR Gypsy 1 558 0 5 593 9938 5 1 7 chr3RHet 1170373 1171572 -1345935 + ACCORD_I LTR Gypsy 1 1192 -5096 5 593 5527 5 3 0 chr3RHet 1171575 1172240 -1345267 + ACCORD_I LTR Gypsy 1318 1984 -4304 5 593 18650 4 0 0 chr3RHet 1172244 1174432 -1343075 + ACCORD_I LTR Gypsy 2494 4681 -1607 5 593 8143 5 1 0 chr3RHet 1174410 1175385 -1342122 + ACCORD_I LTR Gypsy 5313 6288 0 5 593 3075 0 0 0 chr3RHet 1175385 1175743 -1341764 + ACCORD_LTR LTR Gypsy 1 358 -200 5 593 2336 4 0 4 chr3RHet 1175743 1176019 -1341488 - BURDOCK_LTR LTR Gypsy 0 275 1 5 74 39007 38 2 5 chr3RHet 1176020 1181798 -1335709 - BURDOCK_I LTR Gypsy 0 5860 1 5 594 2336 4 0 4 chr3RHet 1181798 1182074 -1335433 - BURDOCK_LTR LTR Gypsy 0 275 1 5 594 1763 0 0 0 chr3RHet 1182074 1182278 -1335229 + ACCORD_LTR LTR Gypsy 355 558 0 5 594 5423 78 111 102 chr3RHet 1182278 1183414 -1334093 - Gypsy9_I LTR Gypsy -2957 3331 2154 5 594 1650 200 111 6 chr3RHet 1183422 1184036 -1333471 - Gypsy9_I LTR Gypsy -3740 2548 1753 5 594 525 15 0 0 chr3RHet 1184034 1184099 -1333408 - Gypsy9_I LTR Gypsy -3370 1307 1243 5 594 2282 167 105 11 chr3RHet 1184126 1184771 -1332736 - Gypsy9_I LTR Gypsy -4906 1382 701 5 594 9834 47 58 2 chr3RHet 1184768 1186820 -1330687 + DMCR1A LINE CR1 1762 3928 -542 5 594 1043 154 30 75 chr3RHet 1186815 1187082 -1330425 - DNAREP1_DM LINE Penelope -336 258 4 5 594 1947 92 128 3 chr3RHet 1187303 1187640 -1329867 - Invader2_I LTR Gypsy -720 3872 3494 5 594 2663 99 81 0 chr3RHet 1187661 1188106 -1329401 - Invader2_I LTR Gypsy -1694 2898 2418 5 594 3557 105 10 0 chr3RHet 1188127 1188709 -1328798 - Invader2_I LTR Gypsy -2412 2180 1593 5 594 7167 46 37 2 chr3RHet 1188710 1189685 -1327822 + TRANSIB3 DNA Transib 1 1009 -1874 5 594 407 114 0 0 chr3RHet 1189683 1189753 -1327754 + TRANSIB3 DNA Transib 2391 2460 -423 5 594 2657 34 51 0 chr3RHet 1189767 1190123 -1327384 + TRANSIB3 DNA Transib 2510 2883 0 5 594 602 98 0 0 chr3RHet 1190123 1190215 -1327292 - Invader2_I LTR Gypsy -2996 1596 1505 5 594 458 87 0 0 chr3RHet 1190214 1190283 -1327224 - Invader2_I LTR Gypsy -3247 1345 1277 5 594 782 144 89 93 chr3RHet 1190294 1190508 -1326999 - ACCORD2_LTR LTR Gypsy -2 213 1 5 594 641 106 0 0 chr3RHet 1190508 1190600 -1326907 - ACCORD2_I LTR Gypsy -11 7201 7110 5 594 346 141 0 147 chr3RHet 1190599 1190715 -1326792 - ACCORD2_I LTR Gypsy -5553 1659 1561 5 594 4893 52 11 0 chr3RHet 1190717 1191368 -1326139 + QUASIMODO_LTR LTR Gypsy 1 658 0 5 594 12891 56 56 25 chr3RHet 1191368 1193301 -1324206 + QUASIMODO_I LTR Gypsy 1 1994 -4066 5 594 18682 48 45 7 chr3RHet 1193286 1195958 -1321549 + QUASIMODO_I LTR Gypsy 2592 5364 -696 5 594 40579 1 0 0 chr3RHet 1195987 1200680 -1316827 + FW_DM LINE Jockey 1 4692 0 5 594 4730 34 41 0 chr3RHet 1200687 1201369 -1316138 + QUASIMODO_I LTR Gypsy 5351 6060 0 5 594 547 53 0 0 chr3RHet 1201369 1201444 -1316063 + QUASIMODO_LTR LTR Gypsy 1 75 -583 5 594 11609 76 35 2 chr3RHet 1201443 1203124 -1314383 + DMRT1C LINE R1 2932 4667 -776 5 594 242 103 0 0 chr3RHet 1203124 1203163 -1314344 + DMRT1C LINE R1 2595 2633 -2810 5 594 1372 62 16 0 chr3RHet 1203224 1203416 -1314091 + DMRT1C LINE R1 2634 2828 -2615 5 594 1502 76 13 13 chr3RHet 1203452 1203680 -1313827 - ACCORD2_I LTR Gypsy -6984 228 1 5 594 854 146 43 128 chr3RHet 1203680 1203915 -1313592 - ACCORD2_LTR LTR Gypsy 0 215 1 5 594 2585 126 56 11 chr3RHet 1203915 1204365 -1313142 - Invader2_I LTR Gypsy -3402 1190 721 5 594 35 63 0 0 chr3RHet 1204365 1204428 -1313079 + AT_rich Low_complexity Low_complexity 1 63 0 5 594 399 136 0 143 chr3RHet 1204723 1204835 -1312672 - Invader2_I LTR Gypsy -4165 427 332 5 594 1211 79 17 0 chr3RHet 1204835 1205012 -1312495 + HOBO DNA hAT 1 180 -2836 5 594 209 73 70 35 chr3RHet 1205552 1205609 -1311898 + A-rich Low_complexity Low_complexity 2 60 0 5 594 9048 14 8 0 chr3RHet 1205813 1206909 -1310598 + PROTOP_A DNA P 1 1105 0 5 594 424 0 0 0 chr3RHet 1206909 1206958 -1310549 + PROTOP_A DNA P 1055 1104 -1 5 594 29 28 0 0 chr3RHet 1207360 1207396 -1310111 + AT_rich Low_complexity Low_complexity 1 36 0 5 594 1688 107 72 26 chr3RHet 1207455 1207762 -1309745 + MAX_LTR LTR Pao 1 321 0 5 594 2069 290 47 55 chr3RHet 1208091 1209824 -1307683 + ZAM_I LTR Gypsy 4151 5869 -1621 5 594 25 31 0 0 chr3RHet 1210341 1210373 -1307134 + AT_rich Low_complexity Low_complexity 1 32 0 5 594 927 112 219 0 chr3RHet 1210427 1210690 -1306817 - MAX_LTR LTR Pao 0 321 1 5 594 11538 30 10 20 chr3RHet 1210696 1212207 -1305300 - MAX_I LTR Pao -2 7912 6418 5 594 700 20 267 0 chr3RHet 1212205 1212306 -1305201 - MAX_I LTR Pao -4354 3560 3433 5 594 14133 40 5 1 chr3RHet 1212307 1214091 -1303416 - MAX_I LTR Pao -4670 3244 1453 5 594 411 188 0 0 chr3RHet 1214460 1214540 -1302967 + HOBO DNA hAT 193 272 -2744 5 594 599 119 528 7 chr3RHet 1214545 1214687 -1302820 + PROTOP_B DNA P 17 232 -921 5 594 186 0 0 81 chr3RHet 1214687 1214724 -1302783 + (TTA)n Simple_repeat Simple_repeat 3 36 0 5 594 3719 316 80 17 chr3RHet 1215004 1217544 -1299963 - Copia2_I LTR Copia -97 4065 1367 5 594 5561 47 68 0 chr3RHet 1217659 1218928 -1298579 - Baggins1 LINE LOA 0 5453 4099 5 594 1121 134 54 15 chr3RHet 1218948 1219153 -1298354 + HOBO DNA hAT 2785 2997 -19 5 594 1173 119 25 0 chr3RHet 1219157 1219359 -1298148 - Invader2_I LTR Gypsy -4251 341 135 5 594 6227 63 32 5 chr3RHet 1219357 1220221 -1297286 - IVK_DM LINE I -270 5132 4245 5 594 22245 59 48 3 chr3RHet 1220220 1223391 -1294116 - IVK_DM LINE I -1796 3606 297 5 594 3027 22 0 0 chr3RHet 1224822 1225186 -1292321 - PROTOP_A DNA P 0 1105 742 5 594 36 62 0 0 chr3RHet 1225630 1225694 -1291813 + AT_rich Low_complexity Low_complexity 1 64 0 5 594 242 279 0 0 chr3RHet 1225994 1226062 -1291445 - Gypsy7_I LTR Gypsy -1930 3054 2987 5 594 917 113 43 0 chr3RHet 1226300 1226485 -1291022 - TLD2 Unknown Unknown -25 193 1 5 594 250 323 30 6 chr3RHet 1226418 1226583 -1290924 - Gypsy4_I LTR Gypsy -3599 2689 2521 5 594 257 277 9 15 chr3RHet 1226577 1226756 -1290751 - Gypsy9_I LTR Gypsy -2630 2047 1952 5 594 28 0 0 0 chr3RHet 1227675 1227703 -1289804 + AT_rich Low_complexity Low_complexity 1 28 0 5 594 4353 84 13 9 chr3RHet 1228339 1228972 -1288535 + Mariner2_DM DNA Tc1 278 912 0 5 594 41 21 0 0 chr3RHet 1229447 1229495 -1288012 + AT_rich Low_complexity Low_complexity 1 48 0 5 594 13966 28 3 6 chr3RHet 1230486 1232223 -1285284 + DIVER2_I LTR Pao 2417 4147 0 5 594 1498 32 5 0 chr3RHet 1232223 1232410 -1285097 + DIVER2_LTR LTR Pao 1 188 -197 5 594 4036 39 14 0 chr3RHet 1232408 1232920 -1284587 - Baggins1 LINE LOA -67 5386 4868 5 594 4068 59 29 0 chr3RHet 1232907 1233451 -1284056 - Baggins1 LINE LOA -798 4655 4096 5 594 525 284 132 0 chr3RHet 1233521 1233778 -1283729 - MDG1_I LTR Gypsy -3726 2870 2580 5 594 780 129 90 0 chr3RHet 1234350 1234505 -1283002 + DMCR1A LINE CR1 2401 2569 -1901 5 594 856 170 260 0 chr3RHet 1234506 1234896 -1282611 + DMCR1A LINE CR1 3192 3683 -787 5 594 535 186 0 25 chr3RHet 1235013 1235134 -1282373 - DMLTR5 LTR Gypsy 0 266 149 5 594 837 104 0 0 chr3RHet 1235174 1235299 -1282208 - HMSBEAGLE_I LTR Gypsy 0 6529 6405 5 594 319 45 0 0 chr3RHet 1235402 1235446 -1282061 - HMSBEAGLE_I LTR Gypsy -126 6403 6360 5 594 666 149 144 107 chr3RHet 1235613 1235876 -1281631 - HMSBEAGLE_I LTR Gypsy -162 6367 6095 5 594 8801 113 147 38 chr3RHet 1235886 1237629 -1279878 - HMSBEAGLE_I LTR Gypsy -633 5896 3964 5 594 1297 62 197 8 chr3RHet 1237628 1237877 -1279630 - HMSBEAGLE_I LTR Gypsy -2841 3688 3393 5 594 10666 62 39 8 chr3RHet 1237920 1238079 -1279428 - DMCR1A LINE CR1 -276 4194 4004 5 594 260 27 27 0 chr3RHet 1238079 1238116 -1279391 + (TTAAA)n Simple_repeat Simple_repeat 2 39 0 5 594 10666 56 100 17 chr3RHet 1238116 1240345 -1277162 - DMCR1A LINE CR1 -467 4003 1616 5 594 12935 75 71 8 chr3RHet 1240357 1242311 -1275196 - HMSBEAGLE_I LTR Gypsy -3139 3390 1314 5 594 9062 13 8 0 chr3RHet 1242311 1243407 -1274100 + PROTOP_A DNA P 1 1105 0 5 594 1335 184 101 32 chr3RHet 1243407 1243736 -1273771 - HMSBEAGLE_I LTR Gypsy -5204 1325 974 5 594 210 193 0 0 chr3RHet 1243808 1243865 -1273642 + (TTG)n Simple_repeat Simple_repeat 1 57 0 5 594 347 161 32 11 chr3RHet 1243972 1244066 -1273441 - HMSBEAGLE_I LTR Gypsy -5817 712 617 5 594 733 123 240 0 chr3RHet 1244092 1244263 -1273244 - HMSBEAGLE_I LTR Gypsy -6314 215 4 5 594 1102 126 78 18 chr3RHet 1244264 1244482 -1273025 - DMLTR5 LTR Gypsy -1 265 35 5 594 262 85 128 0 chr3RHet 1244624 1244659 -1272848 - PROTOP DNA P -8 4472 4431 5 594 605 119 8 25 chr3RHet 1244659 1244780 -1272727 + M4DM DNA Transib 1 119 -1316 5 594 423 61 0 83 chr3RHet 1244779 1244851 -1272656 + M4DM DNA Transib 304 369 -1066 5 594 5064 101 67 16 chr3RHet 1244974 1245953 -1271554 + M4DM DNA Transib 406 1435 0 5 594 1415 103 146 36 chr3RHet 1245968 1246270 -1271237 - PROTOP DNA P -151 4329 3995 5 594 906 41 73 0 chr3RHet 1246274 1246397 -1271110 - PROTOP DNA P -1025 3455 3324 5 594 411 57 0 0 chr3RHet 1246394 1246447 -1271060 - PROTOP DNA P -1420 3060 3008 5 594 6708 98 157 80 chr3RHet 1246473 1247834 -1269673 - HMSBEAGLE_I LTR Gypsy -1101 5428 3964 5 594 1297 62 197 8 chr3RHet 1247833 1248082 -1269425 - HMSBEAGLE_I LTR Gypsy -2841 3688 3393 5 594 805 119 201 0 chr3RHet 1248125 1248284 -1269223 - DMCR1A LINE CR1 -276 4194 4004 5 594 260 27 27 0 chr3RHet 1248284 1248321 -1269186 + (TTAAA)n Simple_repeat Simple_repeat 2 39 0 5 594 3980 49 117 44 chr3RHet 1248343 1248960 -1268547 - DMCR1A LINE CR1 -2193 2277 1616 5 594 12710 73 36 8 chr3RHet 1248972 1250815 -1266692 - HMSBEAGLE_I LTR Gypsy -3139 3390 1496 5 594 519 135 125 0 chr3RHet 1250829 1250925 -1266582 - HMSBEAGLE_I LTR Gypsy -5108 1421 1314 5 594 9062 13 8 0 chr3RHet 1250925 1252021 -1265486 + PROTOP_A DNA P 1 1105 0 5 594 1335 184 101 32 chr3RHet 1252021 1252350 -1265157 - HMSBEAGLE_I LTR Gypsy -5204 1325 974 5 594 210 193 0 0 chr3RHet 1252422 1252479 -1265028 + (TTG)n Simple_repeat Simple_repeat 1 57 0 5 594 347 161 32 11 chr3RHet 1252586 1252680 -1264827 - HMSBEAGLE_I LTR Gypsy -5817 712 617 5 594 733 123 240 0 chr3RHet 1252706 1252877 -1264630 - HMSBEAGLE_I LTR Gypsy -6314 215 4 5 594 1102 126 78 18 chr3RHet 1252878 1253096 -1264411 - DMLTR5 LTR Gypsy -1 265 35 5 594 262 85 128 0 chr3RHet 1253238 1253273 -1264234 - PROTOP_B DNA P -7 1146 1106 5 594 605 119 8 25 chr3RHet 1253273 1253394 -1264113 + M4DM DNA Transib 1 119 -1316 5 594 423 61 0 83 chr3RHet 1253393 1253465 -1264042 + M4DM DNA Transib 304 369 -1066 5 594 3066 104 8 23 chr3RHet 1253588 1254107 -1263400 + M4DM DNA Transib 406 916 -519 5 594 41 21 0 0 chr3RHet 1254631 1254679 -1262828 + AT_rich Low_complexity Low_complexity 1 48 0 5 594 3562 60 58 2 chr3RHet 1255154 1255667 -1261840 - Mariner2_DM DNA Tc1 0 912 371 5 594 409 86 0 0 chr3RHet 1255665 1255723 -1261784 - Mariner2_DM DNA Tc1 -854 58 1 5 594 17679 37 8 35 chr3RHet 1255961 1258364 -1259143 + Gypsy12_LTR LTR Gypsy 1 2336 0 5 594 21 36 0 0 chr3RHet 1258683 1258711 -1258796 + AT_rich Low_complexity Low_complexity 1 28 0 5 594 27 0 0 0 chr3RHet 1259231 1259258 -1258249 + AT_rich Low_complexity Low_complexity 1 27 0 5 594 10988 101 12 2 chr3RHet 1259605 1261324 -1256183 - S_DM DNA Tc1 0 1736 1 5 594 564 277 6 0 chr3RHet 1261953 1262119 -1255388 + DIVER2_I LTR Pao 535 701 -3446 5 594 7174 99 156 2 chr3RHet 1262356 1263684 -1253823 - Gypsy2_I LTR Gypsy -2086 4049 2515 5 594 2995 114 113 4 chr3RHet 1263684 1264196 -1253311 - Gypsy2_I LTR Gypsy -3850 2285 1718 5 594 973 68 0 0 chr3RHet 1264499 1264631 -1252876 + Baggins1 LINE LOA 2434 2565 -2888 5 594 4904 28 47 3 chr3RHet 1264623 1265261 -1252246 + Baggins1 LINE LOA 2669 3334 -2119 5 594 3418 57 104 0 chr3RHet 1265250 1265740 -1251767 + Baggins1 LINE LOA 3437 3977 -1476 5 594 2172 40 0 0 chr3RHet 1265742 1266014 -1251493 + Baggins1 LINE LOA 4213 4484 -969 5 594 28 0 0 0 chr3RHet 1266442 1266470 -1251037 + AT_rich Low_complexity Low_complexity 1 28 0 5 594 267 0 22 44 chr3RHet 1266475 1266520 -1250987 + (TATAA)n Simple_repeat Simple_repeat 5 48 0 5 594 932 56 0 42 chr3RHet 1266527 1266695 -1250812 + (TTA)n Simple_repeat Simple_repeat 1 161 0 5 594 531 78 0 0 chr3RHet 1267158 1267235 -1250272 + (TTA)n Simple_repeat Simple_repeat 1 77 0 5 594 1904 0 5 0 chr3RHet 1267950 1268172 -1249335 + DIVER2_LTR LTR Pao 1 223 -162 5 594 16447 65 67 24 chr3RHet 1268169 1270665 -1246842 + DIVER2_I LTR Pao 481 3082 -1065 5 594 1862 27 0 0 chr3RHet 1270664 1270889 -1246618 + DIVER2_I LTR Pao 3199 3423 -724 5 594 1539 27 0 0 chr3RHet 1270887 1271074 -1246433 + DIVER2_LTR LTR Pao 168 354 -31 5 594 268 314 63 68 chr3RHet 1272862 1273355 -1244152 + Copia2_I LTR Copia 2630 3279 -883 5 594 247 115 35 82 chr3RHet 1274077 1274162 -1243345 + (TTATA)n Simple_repeat Simple_repeat 2 82 0 5 594 1113 42 0 0 chr3RHet 1274189 1274332 -1243175 + (TTA)n Simple_repeat Simple_repeat 2 144 0 5 594 35804 10 5 1 chr3RHet 1274332 1279708 -1237799 + IVK_DM LINE I 1 5402 0 5 594 1491 62 0 2 chr3RHet 1279713 1280150 -1237357 + (TTA)n Simple_repeat Simple_repeat 1 436 0 5 594 26712 1 1 0 chr3RHet 1280152 1283051 -1234456 - DOC LINE Jockey 0 4725 1824 5 594 1052 102 0 11 chr3RHet 1283065 1283244 -1234263 + (TTA)n Simple_repeat Simple_repeat 1 177 0 5 594 287 332 50 35 chr3RHet 1283528 1283787 -1233720 + BS LINE Jockey 347 609 -4517 5 594 233 225 13 173 chr3RHet 1284106 1284262 -1233245 + BS LINE Jockey 991 1121 -4005 5 594 339 280 94 18 chr3RHet 1284454 1284625 -1232882 + BS LINE Jockey 2093 2276 -2850 5 594 338 236 79 0 chr3RHet 1284623 1284712 -1232795 + BS LINE Jockey 2638 2733 -2393 5 594 402 298 68 72 chr3RHet 1285831 1286324 -1231183 + Copia2_I LTR Copia 2630 3279 -883 5 594 231 128 35 82 chr3RHet 1287046 1287131 -1230376 + (TTATA)n Simple_repeat Simple_repeat 2 82 0 5 594 1491 29 0 0 chr3RHet 1287158 1287373 -1230134 + (TTA)n Simple_repeat Simple_repeat 1 215 0 5 594 24 0 0 0 chr3RHet 1287374 1287398 -1230109 + AT_rich Low_complexity Low_complexity 1 24 0 5 594 1170 93 0 9 chr3RHet 1287398 1287855 -1229652 + (TTA)n Simple_repeat Simple_repeat 1 452 0 5 594 287 332 50 35 chr3RHet 1288139 1288398 -1229109 + HELENA_RT LINE Jockey 347 609 -4517 5 594 328 240 14 79 chr3RHet 1288717 1288857 -1228650 + HELENA_RT LINE Jockey 991 1121 -4005 5 594 325 286 94 18 chr3RHet 1289049 1289220 -1228287 + HELENA_RT LINE Jockey 2093 2276 -2850 5 594 573 290 84 24 chr3RHet 1289218 1289469 -1228038 + HELENA_RT LINE Jockey 2638 2903 -2223 5 594 2442 250 69 11 chr3RHet 1289489 1290451 -1227056 + HELENA_RT LINE Jockey 1 376 -941 5 594 3720 48 0 13 chr3RHet 1292422 1292890 -1224617 + DOC3_DM LINE Jockey 169 630 -4110 5 594 6774 67 50 8 chr3RHet 1292892 1293814 -1223693 + DMRT1A LINE R1 1 961 -4222 5 594 17789 35 28 18 chr3RHet 1293813 1296024 -1221483 + DMRT1A LINE R1 1104 3335 -1848 5 594 3497 36 5 0 chr3RHet 1296016 1296430 -1221077 + DMRT1A LINE R1 4451 4866 -317 5 594 645 38 0 0 chr3RHet 1296426 1296506 -1221001 + DMRT1A LINE R1 5094 5173 -10 5 594 1093 15 0 0 chr3RHet 1296507 1296638 -1220869 + DOC3_DM LINE Jockey 620 750 -3990 5 594 939 39 7 59 chr3RHet 1296642 1296777 -1220730 + DMCR1A LINE CR1 239 366 -4104 5 594 12912 37 29 3 chr3RHet 1296771 1298317 -1219190 + DMCR1A LINE CR1 664 2248 -2222 5 594 11588 31 30 2 chr3RHet 1298323 1299700 -1217807 + DMCR1A LINE CR1 2555 3969 -501 5 594 2925 34 53 0 chr3RHet 1299700 1300056 -1217451 + DMCR1A LINE CR1 4096 4470 0 5 594 5241 41 8 0 chr3RHet 1300057 1300691 -1216816 + DOC3_DM LINE Jockey 811 1449 -3291 5 594 3619 48 39 0 chr3RHet 1301193 1301650 -1215857 + DOC3_DM LINE Jockey 1421 1895 -2845 5 594 7515 31 2 0 chr3RHet 1301649 1302519 -1214988 + DOC3_DM LINE Jockey 2199 3070 -1670 5 594 7954 33 73 32 chr3RHet 1302519 1303580 -1213927 - PROTOP_A DNA P 0 1105 1 5 594 11759 44 24 4 chr3RHet 1303581 1305128 -1212379 + DOC3_DM LINE Jockey 3065 4740 0 5 594 1241 323 103 39 chr3RHet 1305134 1305882 -1211625 - DIVER2_I LTR Pao -2904 1243 447 5 594 814 148 196 5 chr3RHet 1306426 1306630 -1210877 - DNAREP1_DM LINE Penelope -70 524 282 5 594 310 296 26 0 chr3RHet 1307494 1307609 -1209898 - FW3_DM LINE Jockey -421 2711 2594 5 594 347 172 0 0 chr3RHet 1309210 1309274 -1208233 - DNAREP1_DM LINE Penelope 0 594 531 5 594 1269 178 74 10 chr3RHet 1309319 1309631 -1207876 - DNAREP1_DM LINE Penelope -262 332 1 5 74 26 64 0 0 chr3RHet 1310691 1310738 -1206769 + AT_rich Low_complexity Low_complexity 1 47 0 5 595 28 0 0 0 chr3RHet 1310866 1310894 -1206613 + AT_rich Low_complexity Low_complexity 1 28 0 5 595 1017 185 143 5 chr3RHet 1311418 1311641 -1205866 - DMCR1A LINE CR1 -842 3628 3375 5 595 1672 131 0 4 chr3RHet 1311944 1312197 -1205310 + Gypsy12A_LTR LTR Gypsy 1849 2100 -180 5 595 3015 56 158 41 chr3RHet 1312234 1312701 -1204806 + DMCR1A LINE CR1 1 522 -3948 5 595 231 276 0 0 chr3RHet 1313410 1313468 -1204039 - ROOA_I LTR Pao -3316 3533 3476 5 595 3749 41 2 17 chr3RHet 1315163 1315632 -1201875 + DOC3_DM LINE Jockey 169 630 -4110 5 595 7603 54 18 2 chr3RHet 1315634 1316580 -1200927 + DMRT1A LINE R1 1 961 -4222 5 595 17765 35 28 18 chr3RHet 1316579 1318790 -1198717 + DMRT1A LINE R1 1104 3335 -1848 5 595 3497 36 5 0 chr3RHet 1318782 1319196 -1198311 + DMRT1A LINE R1 4451 4866 -317 5 595 645 38 0 0 chr3RHet 1319192 1319272 -1198235 + DMRT1A LINE R1 5094 5173 -10 5 595 1093 15 0 0 chr3RHet 1319273 1319404 -1198103 + DOC3_DM LINE Jockey 620 750 -3990 5 595 939 39 7 59 chr3RHet 1319408 1319543 -1197964 + DMCR1A LINE CR1 239 366 -4104 5 595 12912 37 29 3 chr3RHet 1319537 1321083 -1196424 + DMCR1A LINE CR1 664 2248 -2222 5 595 16013 32 20 1 chr3RHet 1321089 1322969 -1194538 + DMCR1A LINE CR1 2555 4470 0 5 595 5029 45 24 0 chr3RHet 1322968 1323592 -1193915 + DOC3_DM LINE Jockey 811 1449 -3291 5 595 3804 47 15 0 chr3RHet 1324094 1324562 -1192945 + DOC3_DM LINE Jockey 1421 1895 -2845 5 595 7482 33 2 0 chr3RHet 1324561 1325431 -1192076 + DOC3_DM LINE Jockey 2199 3070 -1670 5 595 8784 32 34 2 chr3RHet 1325432 1326502 -1191005 - PROTOP_A DNA P -1 1104 1 5 595 3327 55 29 0 chr3RHet 1326503 1326919 -1190588 + DOC3_DM LINE Jockey 3065 3492 -1248 5 595 4047 39 39 0 chr3RHet 1326904 1327394 -1190113 + DMCR1A LINE CR1 3962 4470 0 5 595 5118 39 24 0 chr3RHet 1327392 1328016 -1189491 + DOC3_DM LINE Jockey 811 1449 -3291 5 595 3804 47 15 0 chr3RHet 1328518 1328986 -1188521 + DOC3_DM LINE Jockey 1421 1895 -2845 5 595 7482 33 2 0 chr3RHet 1328985 1329855 -1187652 + DOC3_DM LINE Jockey 2199 3070 -1670 5 595 8925 30 31 2 chr3RHet 1329856 1330929 -1186578 - PROTOP_A DNA P -1 1104 1 5 595 11323 43 48 5 chr3RHet 1330930 1332442 -1185065 + DOC3_DM LINE Jockey 3065 4740 0 5 595 258 364 8 0 chr3RHet 1332448 1332566 -1184941 - DIVER2_I LTR Pao -2904 1243 1125 5 595 1241 316 9 0 chr3RHet 1332763 1333196 -1184311 - DIVER2_I LTR Pao -3264 883 447 5 595 701 158 184 65 chr3RHet 1333735 1333952 -1183555 - DNAREP1_DM LINE Penelope -70 524 282 5 595 304 304 26 0 chr3RHet 1334816 1334931 -1182576 - FW3_DM LINE Jockey -421 2711 2594 5 595 342 164 0 0 chr3RHet 1336551 1336612 -1180895 - DNAREP1_DM LINE Penelope -3 591 531 5 595 917 155 0 77 chr3RHet 1336621 1336803 -1180704 + DNAREP1_DM LINE Penelope 321 488 -106 5 595 586 137 244 0 chr3RHet 1336823 1336954 -1180553 + DMCR1A LINE CR1 4047 4209 -261 5 595 3117 22 0 0 chr3RHet 1336954 1337309 -1180198 + DIVER2_LTR LTR Pao 21 375 -10 5 595 8194 34 18 0 chr3RHet 1337307 1338295 -1179212 + DMCR1A LINE CR1 3040 4045 -425 5 595 965 73 37 0 chr3RHet 1338286 1338422 -1179085 + DMCR1A LINE CR1 4330 4470 0 5 595 844 87 39 16 chr3RHet 1338431 1338560 -1178947 + Gypsy12A_LTR LTR Gypsy 2138 2269 -11 5 595 476 161 24 89 chr3RHet 1338560 1338683 -1178824 + Gypsy12_I LTR Gypsy 45 159 -5387 5 595 561 222 47 52 chr3RHet 1338977 1339282 -1178225 - Gypsy8_I LTR Gypsy -4111 236 1 5 595 784 160 4 110 chr3RHet 1339266 1339535 -1177972 - Gypsy8_LTR LTR Gypsy 0 304 1 5 595 4798 127 19 0 chr3RHet 1339538 1340284 -1177223 - FW_DM LINE Jockey -545 4147 3388 5 595 27 29 0 0 chr3RHet 1340285 1340319 -1177188 + AT_rich Low_complexity Low_complexity 1 34 0 5 595 1291 169 17 53 chr3RHet 1340352 1340652 -1176855 - Gypsy5_LTR LTR Gypsy -141 289 1 5 595 917 181 6 0 chr3RHet 1340663 1340829 -1176678 - Gypsy5_I LTR Gypsy 0 6509 6343 5 595 8387 176 13 0 chr3RHet 1340822 1342427 -1175080 - Gypsy5_I LTR Gypsy -573 5936 4311 5 595 2250 173 0 55 chr3RHet 1342442 1342895 -1174612 - Gypsy5_I LTR Gypsy -2333 4176 3749 5 595 2989 6 0 0 chr3RHet 1342896 1343226 -1174281 - TRANSPAC_LTR LTR Gypsy 0 330 1 5 595 39504 9 0 1 chr3RHet 1343225 1347820 -1169687 - TRANSPAC_I LTR Gypsy 0 4590 1 5 595 2989 6 0 0 chr3RHet 1347820 1348150 -1169357 - TRANSPAC_LTR LTR Gypsy 0 330 1 5 595 19603 166 32 8 chr3RHet 1348150 1351729 -1165778 - Gypsy5_I LTR Gypsy -2758 3751 88 5 595 1223 168 20 54 chr3RHet 1356815 1357111 -1160396 - Gypsy5_LTR LTR Gypsy -144 286 1 5 595 4441 157 42 0 chr3RHet 1357117 1357889 -1159618 - Gypsy5_I LTR Gypsy -24 6485 5682 5 595 1432 41 0 0 chr3RHet 1357894 1358066 -1159441 - DOC3_DM LINE Jockey -368 4372 4201 5 595 4993 42 24 0 chr3RHet 1358482 1359106 -1158401 - DOC3_DM LINE Jockey -3291 1449 811 5 595 1977 26 9 0 chr3RHet 1359105 1359337 -1158170 - DMCR1A LINE CR1 0 4470 4237 5 595 331 50 0 0 chr3RHet 1359337 1359377 -1158130 - IDEFIX_I LTR Gypsy -5588 40 1 5 595 25 0 0 0 chr3RHet 1359647 1359672 -1157835 + AT_rich Low_complexity Low_complexity 1 25 0 5 595 2845 45 18 23 chr3RHet 1359863 1360254 -1157253 - IDEFIX_LTR LTR Gypsy 0 594 206 5 595 4235 62 8 8 chr3RHet 1360255 1360870 -1156637 - IDEFIX_I LTR Gypsy -87 5541 4927 5 595 21193 56 10 3 chr3RHet 1360882 1363622 -1153885 - IDEFIX_I LTR Gypsy -2089 3539 780 5 595 5449 59 17 9 chr3RHet 1363613 1364364 -1153143 - IDEFIX_I LTR Gypsy -680 4948 4192 5 595 23695 59 12 2 chr3RHet 1364358 1367467 -1150040 - IDEFIX_I LTR Gypsy -1711 3917 780 5 595 5425 60 17 9 chr3RHet 1367458 1368209 -1149298 - IDEFIX_I LTR Gypsy -680 4948 4192 5 595 23827 60 9 2 chr3RHet 1368203 1371320 -1146187 - IDEFIX_I LTR Gypsy -1711 3917 780 5 595 5500 55 17 9 chr3RHet 1371311 1372062 -1145445 - IDEFIX_I LTR Gypsy -680 4948 4192 5 595 23867 60 9 2 chr3RHet 1372056 1375174 -1142333 - IDEFIX_I LTR Gypsy -1711 3917 780 5 595 5500 55 17 9 chr3RHet 1375165 1375916 -1141591 - IDEFIX_I LTR Gypsy -680 4948 4192 5 595 24337 56 28 2 chr3RHet 1375910 1379725 -1137782 - IDEFIX_I LTR Gypsy -1711 3917 1 5 595 25 0 0 0 chr3RHet 1379995 1380020 -1137487 + AT_rich Low_complexity Low_complexity 1 25 0 5 595 1902 22 0 0 chr3RHet 1380107 1380335 -1137172 - IDEFIX_LTR LTR Gypsy -366 228 1 5 595 241 125 0 0 chr3RHet 1380303 1380343 -1137164 + BARI1 DNA Tc1 3 42 -1708 5 595 6377 47 71 1 chr3RHet 1380341 1381195 -1136312 - DOC3_DM LINE Jockey -3475 1265 352 5 595 7624 165 106 6 chr3RHet 1381174 1382752 -1134755 - FW_DM LINE Jockey -2222 2571 697 5 595 3524 194 72 70 chr3RHet 1382838 1384073 -1133434 - MDG1_I LTR Gypsy -5354 1242 113 5 595 31 26 0 0 chr3RHet 1384237 1384275 -1133232 + AT_rich Low_complexity Low_complexity 1 38 0 5 595 977 144 83 15 chr3RHet 1384309 1384513 -1132994 - MDG1_LTR LTR Gypsy -29 413 196 5 595 1590 15 0 0 chr3RHet 1384514 1384787 -1132720 + (TTA)n Simple_repeat Simple_repeat 1 273 0 5 595 1721 302 44 12 chr3RHet 1384804 1385737 -1131770 - Gypsy5_I LTR Gypsy -2174 4114 2528 5 595 1062 111 214 0 chr3RHet 1386623 1386907 -1130600 + DMRT1A LINE R1 4288 4632 -551 5 595 385 109 0 0 chr3RHet 1386897 1386952 -1130555 + DMRT1C LINE R1 639 693 -4750 5 595 1726 136 282 8 chr3RHet 1386953 1387723 -1129784 + DMRT1C LINE R1 1664 2643 -2800 5 595 4007 113 137 0 chr3RHet 1387793 1388457 -1129050 + DMRT1C LINE R1 4369 5123 -320 5 595 3258 118 30 0 chr3RHet 1388459 1388951 -1128556 + DMRT1B LINE R1 1228 1734 -3449 5 595 3189 56 202 6 chr3RHet 1388951 1389451 -1128056 + PROTOP DNA P 1 600 -3880 5 595 605 146 228 7 chr3RHet 1389437 1389582 -1127925 + PROTOP DNA P 898 1074 -3406 5 595 616 102 45 0 chr3RHet 1389589 1389677 -1127830 + PROTOP DNA P 3926 4017 -463 5 595 3117 35 32 0 chr3RHet 1389680 1390054 -1127453 - ROOA_LTR LTR Pao 0 386 1 5 595 6687 50 64 5 chr3RHet 1390067 1390959 -1126548 - ROOA_I LTR Pao -7 6842 5898 5 595 274 89 0 0 chr3RHet 1390960 1391005 -1126502 + PROTOP DNA P 663 707 -3773 5 595 422 108 0 0 chr3RHet 1391006 1391071 -1126436 + PROTOP DNA P 1009 1073 -3407 5 595 3614 5 7 7 chr3RHet 1391086 1391500 -1126007 - DM297_LTR LTR Gypsy 0 414 1 5 595 54743 7 0 1 chr3RHet 1391500 1397669 -1119838 - DM297_I LTR Gypsy 0 6167 1 5 595 3614 5 7 7 chr3RHet 1397669 1398083 -1119424 - DM297_LTR LTR Gypsy 0 414 1 5 595 2147 108 112 10 chr3RHet 1398109 1398527 -1118980 + PROTOP_A DNA P 683 1105 0 5 595 7617 95 16 2 chr3RHet 1398578 1399616 -1117891 + G5A_DM LINE Jockey 31 1083 -1758 5 595 1202 33 53 0 chr3RHet 1399615 1399766 -1117741 + G5A_DM LINE Jockey 1240 1398 -1443 5 595 22 0 0 0 chr3RHet 1399858 1399880 -1117627 + AT_rich Low_complexity Low_complexity 1 22 0 5 595 3848 306 48 52 chr3RHet 1400607 1404592 -1112915 - ZAM_I LTR Gypsy -428 7264 2142 5 595 246 226 0 0 chr3RHet 1404748 1404801 -1112706 - ZAM_I LTR Gypsy -4563 3129 3077 5 595 372 319 58 61 chr3RHet 1404890 1405184 -1112323 - TIRANT_I LTR Gypsy -4922 2770 2478 5 595 624 321 27 43 chr3RHet 1405319 1405693 -1111814 - ZAM_I LTR Gypsy -5397 2093 1726 5 595 6264 23 4 8 chr3RHet 1406831 1407567 -1109940 - DMRT1A LINE R1 0 5183 4451 5 595 17049 32 50 18 chr3RHet 1407559 1409722 -1107785 - DMRT1A LINE R1 -1848 3335 1104 5 595 2718 83 83 5 chr3RHet 1409752 1410150 -1107357 - DMRT1A LINE R1 -4754 429 1 5 595 3653 50 2 21 chr3RHet 1410152 1410623 -1106884 - DOC3_DM LINE Jockey -4110 630 169 5 595 7707 50 93 0 chr3RHet 1410766 1411784 -1105723 - DMRT1A LINE R1 -4070 1113 1 5 595 475 130 0 0 chr3RHet 1412464 1412533 -1104974 + G5A_DM LINE Jockey 1496 1564 -1277 5 595 1420 87 123 3 chr3RHet 1412539 1412888 -1104619 + G5A_DM LINE Jockey 1855 2245 -596 5 595 231 139 0 0 chr3RHet 1412882 1412918 -1104589 + G5A_DM LINE Jockey 2798 2833 -8 5 595 1770 167 66 16 chr3RHet 1414161 1414615 -1102892 - HELENA_RT LINE Jockey 0 1317 1033 5 595 5012 108 39 7 chr3RHet 1414625 1415386 -1102121 - HELENA_RT LINE Jockey -423 894 109 5 595 479 253 87 31 chr3RHet 1415375 1415571 -1101936 - BS LINE Jockey -2827 2299 2093 5 595 284 337 23 11 chr3RHet 1415587 1415764 -1101743 - BS LINE Jockey -3434 1692 1514 5 595 275 266 35 76 chr3RHet 1415785 1415956 -1101551 - BS LINE Jockey -4005 1121 958 5 595 305 355 42 13 chr3RHet 1416243 1416480 -1101027 - BS LINE Jockey -4517 609 366 5 595 672 77 0 0 chr3RHet 1416714 1416805 -1100702 + (TAA)n Simple_repeat Simple_repeat 1 91 0 5 595 2107 35 7 34 chr3RHet 1416805 1417095 -1100412 - BATUMI_I LTR Pao -680 7283 7002 5 595 5735 160 13 37 chr3RHet 1417095 1418486 -1099021 - BATUMI_I LTR Pao 0 7963 6563 5 595 33166 63 52 69 chr3RHet 1418477 1423609 -1093898 - BATUMI_I LTR Pao -2917 5046 1 5 595 2037 67 21 43 chr3RHet 1423609 1424029 -1093478 - BATUMI_I LTR Pao -624 7339 7002 5 595 966 88 0 0 chr3RHet 1424029 1424176 -1093331 + (TAA)n Simple_repeat Simple_repeat 2 148 0 5 595 186 0 98 39 chr3RHet 1424205 1424256 -1093251 + (TATAA)n Simple_repeat Simple_repeat 2 55 0 5 595 24 67 0 0 chr3RHet 1424261 1424306 -1093201 + AT_rich Low_complexity Low_complexity 1 45 0 5 595 1620 57 0 6 chr3RHet 1424360 1425080 -1092427 + (TAA)n Simple_repeat Simple_repeat 1 715 0 5 595 636 184 0 0 chr3RHet 1425124 1425233 -1092274 - HELENA_RT LINE Jockey -34 1283 1175 5 595 908 48 0 8 chr3RHet 1427187 1427314 -1090193 + (TTA)n Simple_repeat Simple_repeat 2 127 0 5 595 24 0 0 0 chr3RHet 1427678 1427702 -1089805 + AT_rich Low_complexity Low_complexity 1 24 0 5 595 51 75 0 0 chr3RHet 1427956 1428063 -1089444 + AT_rich Low_complexity Low_complexity 1 107 0 5 595 22 0 0 0 chr3RHet 1428895 1428917 -1088590 + AT_rich Low_complexity Low_complexity 1 22 0 5 595 23 0 0 0 chr3RHet 1429591 1429614 -1087893 + AT_rich Low_complexity Low_complexity 1 23 0 5 595 263 278 124 45 chr3RHet 1430092 1430269 -1087238 + CIRCE LINE Composite 2505 2695 -3661 5 595 2335 18 0 47 chr3RHet 1430739 1431036 -1086471 - BATUMI_I LTR Pao -679 7284 7002 5 595 5656 174 12 38 chr3RHet 1431036 1432625 -1084882 - BATUMI_I LTR Pao 0 7963 6369 5 595 19389 141 82 89 chr3RHet 1432640 1437498 -1080009 - BATUMI_I LTR Pao -3141 4822 1 5 595 2387 14 0 28 chr3RHet 1437498 1437789 -1079718 - BATUMI_I LTR Pao -679 7284 7002 5 595 374 234 18 26 chr3RHet 1437844 1437958 -1079549 - DM176_LTR LTR Gypsy 0 507 395 5 595 310 284 67 60 chr3RHet 1439856 1440190 -1077317 - ZAM_I LTR Gypsy -3793 3697 3535 5 596 206 91 54 18 chr3RHet 1441956 1442012 -1075495 + (CGTTG)n Simple_repeat Simple_repeat 1 58 0 5 596 3795 160 242 1 chr3RHet 1442393 1443565 -1073942 + BS2 LINE Jockey 415 1871 -2850 5 596 484 303 383 3 chr3RHet 1443574 1443861 -1073646 + BS2 LINE Jockey 2130 2525 -2196 5 596 870 154 0 0 chr3RHet 1443984 1444120 -1073387 + BS3_DM LINE Jockey 1208 1343 -447 5 596 1015 139 111 6 chr3RHet 1444118 1444296 -1073211 + BS3_DM LINE Jockey 1505 1701 -89 5 596 2556 65 31 0 chr3RHet 1444296 1444649 -1072858 + TRANSIB4 DNA Transib 1 364 -2246 5 596 6580 60 33 38 chr3RHet 1444673 1445611 -1071896 + TRANSIB4 DNA Transib 1673 2605 -5 5 596 8041 129 54 66 chr3RHet 1445652 1447458 -1070049 + Transib5 DNA Transib 3 1785 -1216 5 596 6675 51 34 0 chr3RHet 1447445 1448295 -1069212 + Transib5 DNA Transib 1924 2802 -199 5 596 1949 108 13 22 chr3RHet 1448372 1448683 -1068824 + G_DM LINE Jockey 1825 2132 -2214 5 596 3915 158 96 4 chr3RHet 1448685 1450374 -1067133 + G_DM LINE Jockey 2465 4107 -239 5 596 365 80 0 0 chr3RHet 1450375 1450425 -1067082 + Transib5 DNA Transib 2795 2844 -157 5 596 17592 60 50 5 chr3RHet 1450423 1452738 -1064769 - ACCORD2_I LTR Gypsy -1128 6084 3664 5 596 9425 70 70 15 chr3RHet 1452738 1454091 -1063416 - ACCORD2_I LTR Gypsy -3949 3263 1836 5 596 2652 90 64 50 chr3RHet 1454061 1454576 -1062931 - ACCORD2_I LTR Gypsy -5184 2028 1507 5 596 9369 34 1 0 chr3RHet 1454620 1455724 -1061783 - PROTOP_A DNA P 0 1105 1 5 596 3851 140 80 52 chr3RHet 1455768 1456894 -1060613 - ACCORD2_I LTR Gypsy -5845 1367 1 5 596 785 153 83 30 chr3RHet 1456894 1457062 -1060445 - ACCORD2_LTR LTR Gypsy 0 215 39 5 596 2578 285 103 13 chr3RHet 1457144 1458229 -1059278 + G_DM LINE Jockey 1320 2502 -1844 5 596 649 170 48 0 chr3RHet 1458515 1458662 -1058845 - Gypsy8_I LTR Gypsy -4187 160 7 5 596 1138 104 5 86 chr3RHet 1458659 1458869 -1058638 - Gypsy8_LTR LTR Gypsy -111 193 1 5 596 777 128 15 118 chr3RHet 1458872 1459067 -1058440 - Gypsy8_I LTR Gypsy -3 4344 4170 5 596 507 124 0 0 chr3RHet 1459144 1459233 -1058274 - Gypsy8_I LTR Gypsy -171 4176 4088 5 596 3747 158 20 45 chr3RHet 1459266 1460047 -1057460 - Gypsy8_I LTR Gypsy -179 4168 3407 5 596 5158 217 78 46 chr3RHet 1460113 1461862 -1055645 - Gypsy8_I LTR Gypsy -4284 2369 230 5 596 902 132 116 51 chr3RHet 1462185 1462400 -1055107 - Gypsy8_I LTR Gypsy -4118 229 1 5 596 1858 125 0 44 chr3RHet 1462400 1462717 -1054790 - Gypsy8_LTR LTR Gypsy 0 304 2 5 596 2468 261 74 5 chr3RHet 1462720 1463623 -1053884 + G_DM LINE Jockey 3034 3735 -611 5 596 10454 79 50 2 chr3RHet 1465061 1466498 -1051009 + DMCR1A LINE CR1 1082 2587 -1883 5 596 10383 74 60 8 chr3RHet 1466508 1467779 -1049728 + DMCR1A LINE CR1 2690 4003 -467 5 596 260 27 27 0 chr3RHet 1467779 1467816 -1049691 + (TTTAA)n Simple_repeat Simple_repeat 2 39 0 5 596 10383 74 60 8 chr3RHet 1467816 1467975 -1049532 + DMCR1A LINE CR1 4004 4194 -276 5 596 1378 61 198 0 chr3RHet 1468018 1468265 -1049242 + HMSBEAGLE_I LTR Gypsy 3393 3688 -2841 5 596 7160 97 167 81 chr3RHet 1468264 1469613 -1047894 + HMSBEAGLE_I LTR Gypsy 3964 5428 -1101 5 596 444 95 0 31 chr3RHet 1469640 1469705 -1047802 + PROTOP DNA P 3008 3070 -1410 5 596 995 32 73 0 chr3RHet 1469690 1469813 -1047694 + PROTOP DNA P 3324 3455 -1025 5 596 1747 98 134 33 chr3RHet 1469817 1470146 -1047361 + PROTOP DNA P 3995 4356 -124 5 596 5533 101 67 16 chr3RHet 1470178 1471157 -1046350 - M4DM DNA Transib 0 1435 406 5 596 286 233 70 62 chr3RHet 1471168 1471296 -1046211 + TRANSIB4 DNA Transib 1812 1940 -670 5 596 680 24 0 66 chr3RHet 1471280 1471371 -1046136 - M4DM DNA Transib -1047 388 304 5 596 673 110 8 41 chr3RHet 1471370 1471493 -1046014 - M4DM DNA Transib -1316 119 1 5 596 1174 132 79 19 chr3RHet 1471581 1471797 -1045710 + DMLTR5 LTR Gypsy 35 263 -3 5 596 762 112 244 12 chr3RHet 1471800 1471972 -1045535 + HMSBEAGLE_I LTR Gypsy 4 215 -6314 5 596 396 187 37 9 chr3RHet 1471998 1472106 -1045401 + HMSBEAGLE_I LTR Gypsy 617 727 -5802 5 596 210 193 0 0 chr3RHet 1472199 1472256 -1045251 + (CAA)n Simple_repeat Simple_repeat 1 57 0 5 596 1475 181 107 33 chr3RHet 1472328 1472655 -1044852 + HMSBEAGLE_I LTR Gypsy 974 1325 -5204 5 596 9702 14 8 0 chr3RHet 1472655 1473751 -1043756 - PROTOP_A DNA P 0 1105 1 5 596 558 135 125 0 chr3RHet 1473751 1473847 -1043660 + HMSBEAGLE_I LTR Gypsy 1314 1421 -5108 5 596 5330 63 7 6 chr3RHet 1473861 1474535 -1042972 + HMSBEAGLE_I LTR Gypsy 1496 2170 -4359 5 596 6545 86 54 8 chr3RHet 1474530 1475460 -1042047 + HMSBEAGLE_I LTR Gypsy 2428 3400 -3129 5 596 6290 52 112 18 chr3RHet 1475443 1476908 -1040599 + DMCR1A LINE CR1 1600 3202 -1268 5 596 6849 83 23 0 chr3RHet 1476903 1477828 -1039679 + DMCR1A LINE CR1 3445 4390 -80 5 596 24 32 0 0 chr3RHet 1479381 1479412 -1038095 + AT_rich Low_complexity Low_complexity 1 31 0 5 596 247 200 0 0 chr3RHet 1480244 1480299 -1037208 + T-rich Low_complexity Low_complexity 6 60 0 5 596 842 79 31 8 chr3RHet 1480681 1480809 -1036698 - DNAREP1_DM LINE Penelope -284 310 180 5 596 437 220 123 18 chr3RHet 1480806 1480977 -1036530 + DNAREP1_DM LINE Penelope 35 223 -371 5 596 290 336 8 8 chr3RHet 1480975 1481098 -1036409 + DIVER2_I LTR Pao 280 402 -3745 5 596 556 336 22 59 chr3RHet 1481437 1481794 -1035713 + DIVER2_I LTR Pao 1143 1486 -2661 5 596 8640 67 141 36 chr3RHet 1481984 1484360 -1033147 - CIRCE LINE Composite -1440 4916 2291 5 596 39800 11 8 0 chr3RHet 1484359 1488742 -1028765 - BS LINE Jockey -4 5122 707 5 596 3236 19 11 13 chr3RHet 1488736 1489114 -1028393 - BS LINE Jockey -4700 426 50 5 596 1622 26 0 25 chr3RHet 1489542 1489741 -1027766 - G5_DM LINE Jockey -12 4844 4651 5 596 22 0 0 0 chr3RHet 1490135 1490157 -1027350 + AT_rich Low_complexity Low_complexity 1 22 0 5 596 319 51 0 0 chr3RHet 1490219 1490258 -1027249 - DMCR1A LINE CR1 -1490 2980 2942 5 596 355 247 93 0 chr3RHet 1490401 1490498 -1027009 - DIVER2_I LTR Pao -7 4140 4035 5 596 611 181 565 33 chr3RHet 1491428 1491704 -1025803 + DMCR1A LINE CR1 1844 2266 -2204 5 596 250 196 36 0 chr3RHet 1491859 1491915 -1025592 - NOMAD_I LTR Gypsy -5890 682 625 5 596 23 33 0 0 chr3RHet 1492429 1492459 -1025048 + AT_rich Low_complexity Low_complexity 1 30 0 5 596 42809 5 2 2 chr3RHet 1492484 1497207 -1020300 + DOC LINE Jockey 4 4725 0 5 596 26 0 0 0 chr3RHet 1497404 1497430 -1020077 + AT_rich Low_complexity Low_complexity 1 26 0 5 596 1169 311 25 21 chr3RHet 1497644 1498127 -1019380 + MAX_I LTR Pao 2070 2554 -5360 5 596 258 311 113 0 chr3RHet 1498180 1498286 -1019221 + MAX_I LTR Pao 2756 2873 -5041 5 596 233 229 16 16 chr3RHet 1498649 1498711 -1018796 + MAX_I LTR Pao 3570 3631 -4283 5 596 397 68 0 17 chr3RHet 1499019 1499079 -1018428 - G4_DM LINE Jockey -49 3807 3749 5 596 892 76 0 0 chr3RHet 1499267 1499385 -1018122 - CIRCE LINE Composite -1376 4980 4863 5 596 4396 57 33 28 chr3RHet 1499401 1500000 -1017507 - CIRCE LINE Composite -3567 2789 2188 5 596 11053 76 73 128 chr3RHet 1500003 1502087 -1015420 - CIRCE LINE Composite -4173 2183 214 5 596 476 36 0 0 chr3RHet 1502086 1502142 -1015365 - CIRCE LINE Composite -6300 56 1 5 596 7948 43 0 0 chr3RHet 1502142 1503071 -1014436 - CIRCE LINE Composite 0 6356 5428 5 596 3319 57 11 43 chr3RHet 1503185 1503646 -1013861 - CIRCE LINE Composite -930 5426 4981 5 596 346 244 87 31 chr3RHet 1503967 1504094 -1013413 + DIVER2_I LTR Pao 1847 1980 -2167 5 596 931 281 28 17 chr3RHet 1504088 1504378 -1013129 + DIVER2_I LTR Pao 2150 2442 -1705 5 596 780 266 220 38 chr3RHet 1505053 1505475 -1012032 + DIVER2_I LTR Pao 2423 2921 -1226 5 596 719 263 59 14 chr3RHet 1505473 1505693 -1011814 + DIVER2_I LTR Pao 3425 3654 -493 5 596 788 272 147 0 chr3RHet 1505697 1505921 -1011586 + DIVER2_I LTR Pao 3889 4145 -2 5 596 1066 134 86 0 chr3RHet 1506616 1506803 -1010704 + DNAREP1_DM LINE Penelope 1 203 -391 5 596 31 58 0 0 chr3RHet 1506827 1506879 -1010628 + AT_rich Low_complexity Low_complexity 1 52 0 5 596 59 53 0 0 chr3RHet 1506942 1507036 -1010471 + AT_rich Low_complexity Low_complexity 1 94 0 5 596 1138 159 0 0 chr3RHet 1507068 1507244 -1010263 + MAX_I LTR Pao 4087 4262 -3652 5 596 423 133 0 0 chr3RHet 1507240 1507300 -1010207 + MAX_I LTR Pao 4446 4505 -3409 5 596 698 186 47 121 chr3RHet 1507301 1507533 -1009974 + ACCORD2_LTR LTR Gypsy 1 215 0 5 596 3986 138 85 44 chr3RHet 1507533 1508639 -1008868 + ACCORD2_I LTR Gypsy 1 1367 -5845 5 596 9380 34 1 0 chr3RHet 1508683 1509787 -1007720 + PROTOP_A DNA P 1 1105 0 5 596 5558 183 34 91 chr3RHet 1509877 1511632 -1005875 + ACCORD2_I LTR Gypsy 1608 3263 -3949 5 596 19476 55 47 1 chr3RHet 1511632 1514131 -1003376 + ACCORD2_I LTR Gypsy 3664 6277 -935 5 596 3700 72 2 0 chr3RHet 1514130 1514643 -1002864 + ACCORD2_I LTR Gypsy 6462 6975 -237 5 596 703 196 48 105 chr3RHet 1514679 1514907 -1002600 + ACCORD2_LTR LTR Gypsy 1 215 0 5 596 1738 125 81 15 chr3RHet 1514907 1515454 -1002053 + MAX_I LTR Pao 4503 5123 -2791 5 596 218 259 0 0 chr3RHet 1515760 1515818 -1001689 + (TATG)n Simple_repeat Simple_repeat 2 59 0 5 596 2147 106 94 0 chr3RHet 1515826 1516165 -1001342 - DMRT1C LINE R1 -93 5350 4980 5 596 1517 123 43 8 chr3RHet 1516162 1516415 -1001092 - DMRT1C LINE R1 -3173 2270 2009 5 596 1292 97 4 146 chr3RHet 1516408 1516661 -1000846 - DMRT1C LINE R1 -3883 1560 1344 5 596 383 98 0 0 chr3RHet 1516677 1516728 -1000779 - DMRT1C LINE R1 -4080 1363 1313 5 596 3026 103 44 2 chr3RHet 1516730 1517185 -1000322 - DMRT1C LINE R1 -4683 760 287 5 596 2336 127 48 29 chr3RHet 1517188 1517603 -999904 - Invader1_LTR LTR Gypsy 0 423 1 5 596 4206 25 4 2 chr3RHet 1517607 1518088 -999419 - Gypsy_LTR LTR Gypsy 0 482 1 5 596 60101 7 1 0 chr3RHet 1518088 1524589 -992918 - Gypsy_I LTR Gypsy 0 6507 1 5 596 4206 25 4 2 chr3RHet 1524587 1525068 -992439 - Gypsy_LTR LTR Gypsy 0 482 1 5 596 655 132 409 30 chr3RHet 1525074 1525277 -992230 - DMRT1C LINE R1 -5158 285 6 5 596 1349 219 71 42 chr3RHet 1525340 1525789 -991718 + Gypsy_LTR LTR Gypsy 1 462 -20 5 596 23687 161 58 10 chr3RHet 1525795 1529890 -987617 + Gypsy_I LTR Gypsy 364 4654 -1853 5 596 694 216 0 0 chr3RHet 1529894 1530042 -987465 + Gypsy_I LTR Gypsy 5834 5981 -526 5 596 1869 28 0 18 chr3RHet 1530042 1530261 -987246 - ACCORD2_LTR LTR Gypsy 0 215 1 5 596 5762 31 39 3 chr3RHet 1530264 1530985 -986522 - ACCORD2_I LTR Gypsy -4 7208 6462 5 596 43793 32 20 7 chr3RHet 1530984 1536520 -980987 - ACCORD2_I LTR Gypsy -935 6277 1 5 596 1887 9 5 18 chr3RHet 1536520 1536738 -980769 - ACCORD2_LTR LTR Gypsy 0 215 1 5 596 1378 238 50 11 chr3RHet 1536738 1537258 -980249 + Gypsy_I LTR Gypsy 5980 6941 -581 5 596 1163 196 112 58 chr3RHet 1537257 1537669 -979838 + Gypsy_LTR LTR Gypsy 29 462 -20 5 596 544 113 392 0 chr3RHet 1537751 1537923 -979584 - DNAREP1_DM LINE Penelope -5 589 351 5 596 461 147 39 87 chr3RHet 1537919 1538023 -979484 + Gypsy8_LTR LTR Gypsy 206 304 0 5 596 275 170 0 0 chr3RHet 1538023 1538070 -979437 + Gypsy8_I LTR Gypsy 1 47 -4300 5 596 438 298 72 43 chr3RHet 1538537 1538865 -978642 - OSVALDO_I LTR Gypsy -2374 4279 4158 5 596 266 347 51 11 chr3RHet 1538907 1539082 -978425 + OSVALDO_I LTR Gypsy 3811 3992 -2661 5 596 384 167 0 0 chr3RHet 1539202 1539268 -978239 - ROO_I LTR Pao -5735 2521 2456 5 596 5388 132 77 51 chr3RHet 1539350 1540474 -977033 - PROTOP_B DNA P 0 1153 1 5 596 529 304 152 17 chr3RHet 1540591 1541054 -976453 - ROO_I LTR Pao -6201 2055 1530 5 596 330 164 75 83 chr3RHet 1541667 1541787 -975720 - Gypsy8_I LTR Gypsy -4128 219 101 5 596 203 61 0 29 chr3RHet 1541807 1541841 -975666 + (TCTA)n Simple_repeat Simple_repeat 1 33 0 5 596 4333 192 30 30 chr3RHet 1541851 1543185 -974322 - Invader5_I LTR Gypsy -2399 1700 329 5 596 1047 159 191 19 chr3RHet 1543215 1543451 -974056 + GTWIN_LTR LTR Gypsy 60 335 -160 5 596 983 38 128 8 chr3RHet 1543449 1543582 -973925 - DMCR1A LINE CR1 -218 4252 4104 5 596 4573 68 47 6 chr3RHet 1543578 1544664 -972843 + I_DM LINE I 4340 5470 -761 5 596 5633 48 67 1 chr3RHet 1544662 1546010 -971497 + DOC5_DM LINE Jockey 3176 4682 0 5 596 1029 313 51 93 chr3RHet 1546043 1546912 -970595 - BATUMI_I LTR Pao -3308 4655 3824 5 596 3088 51 5 0 chr3RHet 1547236 1547607 -969900 + Baggins1 LINE LOA 5081 5453 0 5 596 3822 309 51 21 chr3RHet 1547798 1550090 -967417 - Invader2_I LTR Gypsy -184 4704 2118 5 596 271 277 0 41 chr3RHet 1550088 1550186 -967321 - MDG3_I LTR Gypsy -2697 2289 2196 5 596 931 138 0 16 chr3RHet 1550197 1550358 -967149 - BS2 LINE Jockey 0 4721 4586 5 596 2929 67 38 1 chr3RHet 1550357 1550742 -966765 - BS2 LINE Jockey -1026 3695 3321 5 596 10867 34 41 0 chr3RHet 1551395 1552702 -964805 + G4_DM LINE Jockey 2387 3746 -110 5 596 8768 74 91 61 chr3RHet 1552703 1554127 -963380 + CIRCE LINE Composite 3515 4980 -1376 5 596 2730 81 67 30 chr3RHet 1554489 1554920 -962587 + CIRCE LINE Composite 4981 5427 -929 5 596 8167 31 0 0 chr3RHet 1555000 1555929 -961578 + CIRCE LINE Composite 5428 6356 0 5 596 436 39 0 0 chr3RHet 1555932 1555984 -961523 + CIRCE LINE Composite 5 56 -6300 5 596 14384 81 58 95 chr3RHet 1555983 1558660 -958847 + CIRCE LINE Composite 214 2789 -3567 5 596 829 76 0 0 chr3RHet 1558676 1558794 -958713 + CIRCE LINE Composite 4863 4980 -1376 5 596 784 28 0 0 chr3RHet 1558982 1559088 -958419 + G4_DM LINE Jockey 3749 3854 -2 5 596 1020 314 23 19 chr3RHet 1559962 1560445 -957062 - MAX_I LTR Pao -5360 2554 2070 5 596 26 0 0 0 chr3RHet 1560659 1560685 -956822 + AT_rich Low_complexity Low_complexity 1 26 0 5 596 25 31 0 0 chr3RHet 1560872 1560904 -956603 + AT_rich Low_complexity Low_complexity 1 32 0 5 596 520 181 565 33 chr3RHet 1561630 1561906 -955601 - DMCR1A LINE CR1 -2204 2266 1844 5 596 319 247 93 0 chr3RHet 1562827 1562924 -954583 + DIVER2_I LTR Pao 4035 4140 -7 5 596 324 26 0 0 chr3RHet 1563067 1563106 -954401 + DMCR1A LINE CR1 2942 2980 -1490 5 596 22 0 0 0 chr3RHet 1563170 1563192 -954315 + AT_rich Low_complexity Low_complexity 1 22 0 5 596 1482 36 0 15 chr3RHet 1563586 1563783 -953724 + G5_DM LINE Jockey 4651 4844 -12 5 596 36 0 0 0 chr3RHet 1564599 1564635 -952872 + AT_rich Low_complexity Low_complexity 1 36 0 5 596 33609 46 47 3 chr3RHet 1565960 1570417 -947090 - DOC3_DM LINE Jockey 0 4740 101 5 596 180 0 0 0 chr3RHet 1570417 1570437 -947070 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 596 33609 46 47 3 chr3RHet 1570437 1570521 -946986 - DOC3_DM LINE Jockey -4640 100 2 5 596 48 18 0 0 chr3RHet 1570535 1570590 -946917 + AT_rich Low_complexity Low_complexity 1 55 0 5 596 332 296 0 34 chr3RHet 1570867 1571014 -946493 + TV1I LTR Gypsy 828 969 -4994 5 596 364 263 0 0 chr3RHet 1571281 1571399 -946108 + TV1I LTR Gypsy 1472 1589 -4374 5 596 1602 246 43 25 chr3RHet 1571874 1572404 -945103 + IDEFIX_I LTR Gypsy 1434 1973 -3655 5 596 1160 64 6 0 chr3RHet 1572402 1572559 -944948 - Baggins1 LINE LOA 0 5453 5296 5 596 1726 79 27 55 chr3RHet 1572561 1572854 -944653 + Gypsy4_LTR LTR Gypsy 1 285 -2 5 74 23581 32 52 10 chr3RHet 1572856 1575985 -941522 + Gypsy4_I LTR Gypsy 1 3263 -3025 5 597 295 27 0 0 chr3RHet 1575985 1576022 -941485 + Gypsy4_I LTR Gypsy 3479 3515 -2773 5 597 2149 54 20 7 chr3RHet 1576010 1576307 -941200 + Gypsy4_I LTR Gypsy 3908 4208 -2080 5 597 1287 50 6 0 chr3RHet 1576295 1576476 -941031 + Gypsy4_I LTR Gypsy 5193 5374 -914 5 597 12507 23 0 1 chr3RHet 1576486 1578011 -939496 + FW_DM LINE Jockey 1 1524 -3168 5 597 6622 21 1 0 chr3RHet 1578005 1578819 -938688 + FW_DM LINE Jockey 2575 3389 -1303 5 597 10487 33 77 12 chr3RHet 1578868 1580316 -937191 + Gypsy4_I LTR Gypsy 1 1541 -4747 5 597 4575 20 0 0 chr3RHet 1580314 1580870 -936637 + FW_DM LINE Jockey 969 1524 -3168 5 597 12377 16 1 0 chr3RHet 1580864 1582348 -935159 + FW_DM LINE Jockey 2575 4059 -633 5 597 1230 50 25 0 chr3RHet 1582344 1582505 -935002 - Baggins1 LINE LOA -1287 4166 4002 5 597 5878 45 31 4 chr3RHet 1582504 1583272 -934235 - Baggins1 LINE LOA -1604 3849 3061 5 597 6001 245 22 22 chr3RHet 1583273 1585215 -932292 + TV1I LTR Gypsy 2293 4233 -1730 5 597 19668 11 2 1 chr3RHet 1585977 1588307 -929200 + DMRT1B LINE R1 2851 5183 0 5 597 192 40 0 0 chr3RHet 1588316 1588341 -929166 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 597 2241 290 12 10 chr3RHet 1588496 1589555 -927952 + QUASIMODO_I LTR Gypsy 4671 5731 -329 5 597 1845 54 191 2 chr3RHet 1589556 1589958 -927549 - TC1_DM DNA Tc1 -4 1662 1185 5 597 4577 60 8 0 chr3RHet 1589946 1590568 -926939 - TC1_DM DNA Tc1 -1033 633 7 5 597 5937 89 84 55 chr3RHet 1591167 1592288 -925219 + PROTOP_B DNA P 1 1153 0 5 597 556 144 0 0 chr3RHet 1592642 1592739 -924768 + DMCR1A LINE CR1 2984 3080 -1390 5 597 217 143 45 60 chr3RHet 1593156 1593223 -924284 + (TATAA)n Simple_repeat Simple_repeat 2 67 0 5 597 1572 156 169 12 chr3RHet 1593224 1593708 -923799 + DMCR1A LINE CR1 3756 4315 -155 5 597 2854 157 229 3 chr3RHet 1594010 1594660 -922847 - DMRT1B LINE R1 -1077 4106 3310 5 597 3091 186 222 11 chr3RHet 1594681 1595807 -921700 - DMRT1B LINE R1 -1994 3189 1826 5 597 436 206 10 0 chr3RHet 1595827 1595924 -921583 - DMRT1B LINE R1 -5084 99 2 5 597 638 228 127 22 chr3RHet 1596219 1596499 -921008 + GTWIN_LTR LTR Gypsy 27 344 -138 5 597 247 181 229 0 chr3RHet 1596644 1596727 -920780 + Gypsy_I LTR Gypsy 1 102 -6405 5 597 23 0 0 0 chr3RHet 1597229 1597252 -920255 + AT_rich Low_complexity Low_complexity 1 23 0 5 597 1134 178 220 12 chr3RHet 1597479 1597815 -919692 - DNAREP1_DM LINE Penelope -4 590 185 5 597 377 113 0 0 chr3RHet 1597962 1598015 -919492 + DMCR1A LINE CR1 1030 1082 -3388 5 597 830 132 90 0 chr3RHet 1598041 1598206 -919301 + DMCR1A LINE CR1 1192 1371 -3099 5 597 1015 72 65 0 chr3RHet 1598206 1598359 -919148 + DNAREP1_DM LINE Penelope 1 163 -431 5 597 528 154 96 51 chr3RHet 1598358 1598515 -918992 + DNAREP1_DM LINE Penelope 100 263 -331 5 597 300 179 119 0 chr3RHet 1598551 1598618 -918889 + DMCR1A LINE CR1 3399 3473 -997 5 597 21 0 0 0 chr3RHet 1598624 1598645 -918862 + AT_rich Low_complexity Low_complexity 1 21 0 5 597 554 119 9 102 chr3RHet 1599002 1599452 -918055 + CT-rich Low_complexity Low_complexity 1 408 0 5 597 977 170 24 8 chr3RHet 1599480 1599732 -917775 + CT-rich Low_complexity Low_complexity 1 256 0 5 597 388 290 261 22 chr3RHet 1599897 1600215 -917292 + MICROPIA_I LTR Gypsy 1286 1679 -2797 5 597 7911 35 17 1 chr3RHet 1600218 1601213 -916294 - DMCR1A LINE CR1 0 4470 3460 5 597 6749 15 34 0 chr3RHet 1601212 1602033 -915474 - DMCR1A LINE CR1 -1534 2936 2088 5 597 7302 17 33 0 chr3RHet 1602031 1602918 -914589 - DMCR1A LINE CR1 -2546 1924 1009 5 597 1492 80 0 0 chr3RHet 1602957 1603157 -914350 - STALKER4_LTR LTR Gypsy -29 373 174 5 597 1573 80 0 49 chr3RHet 1603166 1603430 -914077 - Gypsy7_LTR LTR Gypsy 0 251 1 5 597 1090 104 0 0 chr3RHet 1603430 1603603 -913904 - STALKER4_LTR LTR Gypsy -229 173 1 5 597 502 145 39 174 chr3RHet 1603603 1603862 -913645 - STALKER4_I LTR Gypsy 0 6530 6307 5 597 969 249 69 38 chr3RHet 1603918 1604339 -913168 - Gypsy_LTR LTR Gypsy -20 462 29 5 597 4610 85 11 22 chr3RHet 1604517 1605248 -912259 - CIRCE LINE Composite -1376 4980 4258 5 597 7618 56 34 29 chr3RHet 1605250 1606366 -911141 - CIRCE LINE Composite -2314 4042 2921 5 597 236 0 0 103 chr3RHet 1606365 1606404 -911103 + ROO_I LTR Pao 182 216 -8040 5 597 10726 31 13 7 chr3RHet 1608514 1609891 -907616 + ROO_I LTR Pao 1167 2552 -5704 5 597 11872 26 3 15 chr3RHet 1609879 1611428 -906079 + ROO_I LTR Pao 2693 4222 -4034 5 597 1051 30 0 0 chr3RHet 1611427 1611558 -905949 + ROO_LTR LTR Pao 298 428 0 5 597 555 40 0 0 chr3RHet 1611558 1611632 -905875 + DIVER2_LTR LTR Pao 312 385 0 5 597 3644 52 0 2 chr3RHet 1611632 1612072 -905435 + DIVER2_I LTR Pao 1 439 -3708 5 597 13617 35 20 7 chr3RHet 1612230 1613909 -903598 + ROO_I LTR Pao 859 2559 -5697 5 597 9486 24 0 16 chr3RHet 1613890 1615041 -902466 + ROO_I LTR Pao 2693 3824 -4432 5 597 3104 52 5 54 chr3RHet 1615037 1615463 -902044 + DIVER2_I LTR Pao 1339 1743 -2404 5 597 1236 28 7 0 chr3RHet 1615463 1615608 -901899 + DIVER2_I LTR Pao 1905 2050 -2097 5 597 10448 31 12 11 chr3RHet 1615608 1616852 -900655 + DIVER2_I LTR Pao 2167 3411 -736 5 597 3334 21 0 0 chr3RHet 1616854 1617226 -900281 + DIVER2_LTR LTR Pao 1 372 -13 5 597 323 68 0 43 chr3RHet 1617240 1617286 -900221 - CIRCE LINE Composite -4429 1927 1884 5 597 270 301 26 26 chr3RHet 1617286 1617347 -900160 - Gypsy12_I LTR Gypsy -1596 3936 3835 5 597 6326 48 36 113 chr3RHet 1617353 1618342 -899165 - CIRCE LINE Composite -4471 1885 973 5 597 7062 56 57 29 chr3RHet 1618469 1619412 -898095 - CIRCE LINE Composite -5386 970 1 5 597 6097 39 32 0 chr3RHet 1619439 1620161 -897346 - CIRCE LINE Composite -79 6277 5533 5 597 7443 181 52 124 chr3RHet 1620623 1623146 -894361 - CIRCE LINE Composite -1097 5259 2921 5 597 3474 29 6 32 chr3RHet 1623145 1623611 -893896 + ROO_I LTR Pao 182 728 -7528 5 597 327 136 0 0 chr3RHet 1623611 1623670 -893837 + (CAG)n Simple_repeat Simple_repeat 1 59 0 5 597 505 199 106 130 chr3RHet 1623670 1623737 -893770 + ROO_I LTR Pao 729 795 -7461 5 597 929 109 0 0 chr3RHet 1623955 1624083 -893424 - CIRCE LINE Composite -2107 4249 4122 5 597 296 85 0 60 chr3RHet 1624083 1624133 -893374 - CIRCE LINE Composite -2794 3562 3516 5 597 772 274 119 31 chr3RHet 1624129 1624581 -892926 + MICROPIA_I LTR Gypsy 1188 1679 -2797 5 597 451 35 0 0 chr3RHet 1624584 1624641 -892866 - DMCR1A LINE CR1 0 4470 4414 5 597 5096 72 7 22 chr3RHet 1624640 1625363 -892144 - CIRCE LINE Composite -1387 4969 4258 5 597 7416 56 58 87 chr3RHet 1625365 1626520 -890987 - CIRCE LINE Composite -2314 4042 2921 5 597 3489 33 178 26 chr3RHet 1626519 1626985 -890522 + ROO_I LTR Pao 182 640 -7616 5 597 327 136 0 0 chr3RHet 1626985 1627044 -890463 + (CAG)n Simple_repeat Simple_repeat 1 59 0 5 597 3489 33 178 26 chr3RHet 1627044 1627111 -890396 + ROO_I LTR Pao 641 795 -7461 5 597 929 109 0 0 chr3RHet 1627329 1627457 -890050 - CIRCE LINE Composite -2107 4249 4122 5 597 296 85 0 60 chr3RHet 1627457 1627507 -890000 - CIRCE LINE Composite -2794 3562 3516 5 597 772 274 119 31 chr3RHet 1627503 1627955 -889552 + MICROPIA_I LTR Gypsy 1188 1679 -2797 5 597 8428 42 17 1 chr3RHet 1627958 1628966 -888541 - DMCR1A LINE CR1 0 4470 3447 5 597 4651 22 159 2 chr3RHet 1628952 1629574 -887933 - DMCR1A LINE CR1 -1534 2936 2217 5 597 1394 31 0 0 chr3RHet 1629575 1629737 -887770 - DMCR1A LINE CR1 -2629 1841 1680 5 597 575 29 0 14 chr3RHet 1629735 1629806 -887701 - DMCR1A LINE CR1 -4400 70 1 5 597 593 95 67 0 chr3RHet 1629848 1629953 -887554 - Gypsy12A_LTR LTR Gypsy -481 1799 1688 5 597 2376 169 46 40 chr3RHet 1629960 1630662 -886845 - Gypsy12A_LTR LTR Gypsy -1638 642 1 5 597 255 289 15 15 chr3RHet 1630710 1630853 -886654 + IDEFIX_I LTR Gypsy 1590 1690 -3938 5 597 244 242 22 0 chr3RHet 1631577 1631668 -885839 + A-rich Low_complexity Low_complexity 4 96 0 5 597 259 376 28 28 chr3RHet 1632392 1632603 -884904 + TIRANT_I LTR Gypsy 1723 1933 -5759 5 597 274 267 19 19 chr3RHet 1634069 1634176 -883331 + Gypsy5_I LTR Gypsy 2223 2329 -4180 5 597 646 285 23 27 chr3RHet 1634181 1634444 -883063 + Gypsy5_I LTR Gypsy 2632 2893 -3616 5 597 2431 304 62 53 chr3RHet 1634433 1636365 -881142 + Gypsy5_I LTR Gypsy 2959 4886 -1623 5 597 22 35 0 0 chr3RHet 1636716 1636745 -880762 + AT_rich Low_complexity Low_complexity 1 29 0 5 597 1975 318 52 31 chr3RHet 1637781 1638929 -878578 - Gypsy12_I LTR Gypsy -1428 4118 2947 5 597 226 307 88 88 chr3RHet 1639467 1639706 -877801 - Gypsy12_I LTR Gypsy -3627 1919 1681 5 597 13456 131 37 5 chr3RHet 1640559 1642713 -874794 + DMRT1B LINE R1 1 2223 -2960 5 597 7616 117 50 0 chr3RHet 1642711 1644501 -873006 + DMRT1B LINE R1 2332 4210 -973 5 597 513 95 0 0 chr3RHet 1644500 1644574 -872933 - Gypsy8_I LTR Gypsy -248 4099 4026 5 597 541 56 0 53 chr3RHet 1644681 1644775 -872732 - Gypsy8_I LTR Gypsy -928 3419 3331 5 597 237 271 0 0 chr3RHet 1645097 1645230 -872277 + (CGG)n Simple_repeat Simple_repeat 3 135 0 5 597 919 153 26 16 chr3RHet 1645272 1645486 -872021 - Gypsy8_I LTR Gypsy -1009 3338 2986 5 597 2612 98 5 10 chr3RHet 1645497 1645887 -871620 - Gypsy8_I LTR Gypsy -1631 2716 2329 5 597 326 109 0 0 chr3RHet 1645889 1645935 -871572 - Gypsy8_I LTR Gypsy -2420 1927 1882 5 597 3655 147 29 46 chr3RHet 1646073 1646937 -870570 - Gypsy8_I LTR Gypsy -2800 1547 1035 5 597 2544 190 49 1 chr3RHet 1646945 1647721 -869786 - Gypsy8_I LTR Gypsy -3311 1036 708 5 597 2812 34 3 38 chr3RHet 1647721 1648093 -869414 - Gypsy8_I LTR Gypsy -3759 588 230 5 597 1018 283 37 19 chr3RHet 1648177 1648551 -868956 - OSVALDO_I LTR Gypsy -5865 788 408 5 597 1203 169 0 37 chr3RHet 1649115 1649360 -868147 - Gypsy8_I LTR Gypsy -4111 236 1 5 597 968 178 26 31 chr3RHet 1649360 1649571 -867936 - Gypsy8_LTR LTR Gypsy -94 210 1 5 597 3716 118 47 12 chr3RHet 1649571 1650141 -867366 + DMRT1B LINE R1 4594 5183 0 5 597 461 223 19 0 chr3RHet 1650364 1650467 -867040 + DMRT1A LINE R1 227 331 -4852 5 597 4227 260 121 14 chr3RHet 1650662 1652549 -864958 + DMRT1A LINE R1 813 2876 -2307 5 597 6799 198 70 1 chr3RHet 1652545 1653999 -863508 + DMRT1A LINE R1 3381 4934 -249 5 597 3622 44 123 38 chr3RHet 1654084 1654605 -862902 + PROTOP_B DNA P 1 565 -588 5 597 2416 14 0 27 chr3RHet 1654601 1654892 -862615 - BATUMI_I LTR Pao -679 7284 7002 5 597 50116 69 73 49 chr3RHet 1654892 1662669 -854838 - BATUMI_I LTR Pao 0 7963 1 5 597 2417 21 0 40 chr3RHet 1662669 1662972 -854535 - BATUMI_I LTR Pao -679 7284 6994 5 597 3454 50 143 4 chr3RHet 1662956 1663482 -854025 + PROTOP_B DNA P 553 1151 -2 5 597 4155 111 30 23 chr3RHet 1663497 1664154 -853353 + DMRT1C LINE R1 40 701 -4742 5 597 2093 102 0 32 chr3RHet 1664152 1664498 -853009 + DMRT1C LINE R1 1380 1714 -3729 5 597 1774 38 0 0 chr3RHet 1664484 1664694 -852813 + DMRT1C LINE R1 1988 2197 -3246 5 597 1709 78 30 0 chr3RHet 1664692 1664922 -852585 + DMRT1C LINE R1 2397 2633 -2810 5 597 1040 114 0 0 chr3RHet 1664983 1665132 -852375 + DMRT1C LINE R1 2634 2782 -2661 5 597 1413 99 148 4 chr3RHet 1665107 1665350 -852157 + DMRT1C LINE R1 2986 3263 -2180 5 597 901 321 14 9 chr3RHet 1665331 1665677 -851830 - Gypsy_I LTR Gypsy -2329 4178 3831 5 597 365 164 0 16 chr3RHet 1665685 1665747 -851760 - DMLTR5 LTR Gypsy -166 100 40 5 597 8901 36 65 0 chr3RHet 1666122 1667208 -850299 + Baggins1 LINE LOA 4120 5275 -178 5 597 315 215 89 65 chr3RHet 1667242 1667411 -850096 - NINJA_LTR LTR Pao -144 173 1 5 597 5965 94 47 1 chr3RHet 1667411 1668377 -849130 - NINJA_I LTR Pao 0 6011 5002 5 597 9165 93 46 0 chr3RHet 1668377 1669726 -847781 - NINJA_I LTR Pao -1403 4608 3198 5 597 532 67 247 0 chr3RHet 1669721 1669810 -847697 - NINJA_I LTR Pao -4604 1407 1297 5 597 9149 17 0 0 chr3RHet 1669810 1670915 -846592 - PROTOP_A DNA P 0 1105 1 5 597 3438 98 44 0 chr3RHet 1670915 1671433 -846074 - NINJA_I LTR Pao -4707 1304 764 5 597 1564 171 23 17 chr3RHet 1671420 1671772 -845735 - NINJA_I LTR Pao -5405 606 253 5 597 330 96 0 19 chr3RHet 1671775 1671828 -845679 - NINJA_I LTR Pao -5957 54 3 5 597 468 225 92 75 chr3RHet 1671845 1672138 -845369 - NINJA_LTR LTR Pao -19 298 1 5 597 383 154 89 111 chr3RHet 1673043 1673233 -844274 + DNAREP1_DM LINE Penelope 99 284 -310 5 597 796 204 211 35 chr3RHet 1673233 1673518 -843989 + Gypsy5_I LTR Gypsy 4197 4531 -1978 5 597 449 213 18 18 chr3RHet 1673554 1673664 -843843 + Gypsy5_I LTR Gypsy 4741 4850 -1659 5 597 650 139 30 24 chr3RHet 1674448 1674617 -842890 - TLD2 Unknown Unknown -31 187 18 5 597 255 242 32 32 chr3RHet 1674619 1674713 -842794 - Gypsy4_I LTR Gypsy -3675 2613 2520 5 597 1186 108 168 5 chr3RHet 1675642 1675856 -841651 - PROTOP DNA P 0 4480 4232 5 597 2128 129 80 9 chr3RHet 1675849 1676272 -841235 - FB4_DM DNA Tc1 -1330 2759 2307 5 597 272 324 0 7 chr3RHet 1676272 1676412 -841095 + HMSBEAGLE_I LTR Gypsy 2660 2798 -3731 5 597 945 287 19 12 chr3RHet 1676590 1677013 -840494 + HMSBEAGLE_I LTR Gypsy 3109 3534 -2995 5 597 282 274 14 14 chr3RHet 1677062 1677201 -840306 + Gypsy7_I LTR Gypsy 2963 3066 -1918 5 597 674 349 37 32 chr3RHet 1677316 1678359 -839148 + HMSBEAGLE_I LTR Gypsy 4695 5743 -786 5 597 316 68 0 0 chr3RHet 1680418 1680462 -837045 + DNAREP1_DM LINE Penelope 1 44 -550 5 597 818 127 69 52 chr3RHet 1680463 1680637 -836870 + DNAREP1_DM LINE Penelope 347 523 -71 5 597 480 136 57 37 chr3RHet 1680706 1680843 -836664 + DNAREP1_DM LINE Penelope 141 332 -262 5 597 354 61 0 0 chr3RHet 1680892 1680941 -836566 + DNAREP1_DM LINE Penelope 546 594 0 5 597 358 240 99 0 chr3RHet 1681488 1681609 -835898 + DNAREP1_DM LINE Penelope 1 133 -461 5 597 26 64 0 0 chr3RHet 1681894 1681941 -835566 + AT_rich Low_complexity Low_complexity 1 47 0 5 597 316 68 0 0 chr3RHet 1683818 1683862 -833645 + DNAREP1_DM LINE Penelope 1 44 -550 5 597 818 127 69 52 chr3RHet 1683863 1684037 -833470 + DNAREP1_DM LINE Penelope 347 523 -71 5 597 480 136 57 37 chr3RHet 1684106 1684243 -833264 + DNAREP1_DM LINE Penelope 141 332 -262 5 597 354 61 0 0 chr3RHet 1684292 1684341 -833166 + DNAREP1_DM LINE Penelope 546 594 0 5 597 343 248 99 0 chr3RHet 1684889 1685010 -832497 + DNAREP1_DM LINE Penelope 1 133 -461 5 597 26 64 0 0 chr3RHet 1685297 1685344 -832163 + AT_rich Low_complexity Low_complexity 1 47 0 5 597 912 60 26 41 chr3RHet 1686916 1687196 -830311 + (TA)n Simple_repeat Simple_repeat 1 275 0 5 597 2076 90 45 28 chr3RHet 1688904 1689259 -828248 - DNAREP1_DM LINE Penelope -31 563 203 5 597 2146 144 83 17 chr3RHet 1689260 1689670 -827837 + DMCR1A LINE CR1 663 1099 -3371 5 597 22 35 0 0 chr3RHet 1689965 1689994 -827513 + AT_rich Low_complexity Low_complexity 1 29 0 5 597 1604 160 259 5 chr3RHet 1690401 1691073 -826434 + DMCR1A LINE CR1 1754 2596 -1874 5 597 2656 152 88 27 chr3RHet 1691071 1691673 -825834 + DMCR1A LINE CR1 3622 4260 -210 5 597 268 331 28 22 chr3RHet 1691861 1692040 -825467 + Gypsy12_I LTR Gypsy 3110 3289 -2257 5 597 241 309 64 0 chr3RHet 1692282 1692376 -825131 + Gypsy12_I LTR Gypsy 3530 3629 -1917 5 597 1643 117 173 3 chr3RHet 1693111 1693446 -824061 + DNAREP1_DM LINE Penelope 202 593 -1 5 597 2948 132 182 18 chr3RHet 1693716 1694802 -822705 - DMRT1C LINE R1 -1507 3936 2672 5 597 753 183 351 0 chr3RHet 1694803 1695062 -822445 - DMRT1C LINE R1 -2931 2512 2163 5 597 1520 44 141 4 chr3RHet 1695069 1695318 -822189 + Transib5 DNA Transib 43 325 -2676 5 597 14584 59 59 5 chr3RHet 1695316 1697459 -820048 + Transib5 DNA Transib 734 2991 -10 5 597 256 100 0 0 chr3RHet 1697587 1697627 -819880 - BARI1 DNA Tc1 -1708 42 3 5 597 3236 24 2 0 chr3RHet 1697595 1698004 -819503 + IDEFIX_LTR LTR Gypsy 1 410 -184 5 597 22 35 0 0 chr3RHet 1698191 1698220 -819287 + AT_rich Low_complexity Low_complexity 1 29 0 5 597 364 309 24 24 chr3RHet 1698732 1698901 -818606 + MAX_I LTR Pao 2135 2303 -5611 5 597 382 279 85 28 chr3RHet 1698924 1699101 -818406 + MAX_I LTR Pao 2417 2603 -5311 5 597 272 284 83 28 chr3RHet 1699644 1699789 -817718 + MAX_I LTR Pao 3570 3722 -4192 5 597 1079 107 128 20 chr3RHet 1700954 1701207 -816300 + DNAREP1_DM LINE Penelope 76 301 -293 5 597 749 141 0 0 chr3RHet 1701209 1701337 -816170 + DMCR1A LINE CR1 1226 1353 -3117 5 597 1721 126 85 54 chr3RHet 1701331 1701683 -815824 + DNAREP1_DM LINE Penelope 188 550 -44 5 74 2139 132 81 121 chr3RHet 1703351 1703970 -813537 - DNAREP1_DM LINE Penelope 0 594 1 5 598 34 55 0 0 chr3RHet 1704761 1704816 -812691 + AT_rich Low_complexity Low_complexity 1 55 0 5 598 24 32 0 0 chr3RHet 1704903 1704934 -812573 + AT_rich Low_complexity Low_complexity 1 31 0 5 598 227 67 0 0 chr3RHet 1706137 1706167 -811340 - Gypsy10_I LTR Gypsy -478 4800 4771 5 598 493 81 0 39 chr3RHet 1706168 1706245 -811262 - Gypsy12A_LTR LTR Gypsy 0 2280 2207 5 598 1043 117 63 55 chr3RHet 1706248 1706502 -811005 - Gypsy12A_LTR LTR Gypsy -638 1642 1387 5 598 2140 134 21 70 chr3RHet 1706741 1707256 -810251 - Gypsy12A_LTR LTR Gypsy -918 1362 873 5 598 1772 83 74 30 chr3RHet 1707256 1707555 -809952 - Gypsy12A_LTR LTR Gypsy -1961 319 8 5 598 232 200 20 0 chr3RHet 1707605 1707655 -809852 - Gypsy10_I LTR Gypsy -878 4400 4350 5 598 1537 169 0 24 chr3RHet 1707721 1708012 -809495 - GTWIN_I LTR Gypsy -3969 2452 2169 5 598 327 232 12 12 chr3RHet 1708210 1708293 -809214 - Gypsy_LTR LTR Gypsy -371 111 29 5 598 616 157 37 0 chr3RHet 1708365 1708473 -809034 - GTWIN_I LTR Gypsy -82 6339 6228 5 598 3888 215 68 17 chr3RHet 1708522 1709600 -807907 - GTWIN_I LTR Gypsy -931 6591 4931 5 598 329 146 0 0 chr3RHet 1709650 1709705 -807802 - GTWIN_I LTR Gypsy -1663 4758 4704 5 598 7361 43 55 26 chr3RHet 1709771 1710845 -806662 + PROTOP_A DNA P 1 1105 0 5 598 257 282 99 33 chr3RHet 1710845 1710964 -806543 + T412LTR LTR LTR 60 186 -295 5 598 243 304 21 36 chr3RHet 1710858 1710998 -806509 + Gypsy11_LTR LTR Gypsy 100 237 -215 5 598 1880 108 44 28 chr3RHet 1711008 1711369 -806138 + ROVER-LTR_DM LTR Gypsy 1 367 0 5 598 5676 227 152 75 chr3RHet 1711369 1714293 -803214 + ROVER-I_DM LTR Gypsy 1 3151 -3433 5 598 1653 289 5 5 chr3RHet 1714299 1714887 -802620 + ROVER-I_DM LTR Gypsy 1048 1635 -4949 5 598 12208 193 33 1 chr3RHet 1714891 1718042 -799465 + ROVER-I_DM LTR Gypsy 2056 5308 -1276 5 598 2532 163 40 9 chr3RHet 1718077 1718654 -798853 + ROVER-I_DM LTR Gypsy 5990 6584 0 5 598 1760 111 71 28 chr3RHet 1718654 1719006 -798501 + ROVER-LTR_DM LTR Gypsy 1 367 0 5 598 393 216 24 184 chr3RHet 1719006 1720183 -797324 + ROVER-I_DM LTR Gypsy 1 988 -5596 5 598 1219 66 5 0 chr3RHet 1720188 1720385 -797122 - S_DM DNA Tc1 -1463 273 76 5 598 34108 1 0 0 chr3RHet 1720394 1725112 -792395 + DOC LINE Jockey 4 4720 -5 5 598 610 70 0 0 chr3RHet 1725110 1725196 -792311 + S_DM DNA Tc1 1651 1736 0 5 598 5787 6 1 5 chr3RHet 1725206 1725866 -791641 - QUASIMODO_LTR LTR Gypsy 0 658 1 5 598 4825 32 2 2 chr3RHet 1725883 1726477 -791030 - IDEFIX_LTR LTR Gypsy 0 594 1 5 598 7072 28 1 2 chr3RHet 1726477 1727370 -790137 - IDEFIX_I LTR Gypsy 0 5628 4737 5 598 11131 40 1 7 chr3RHet 1727367 1728796 -788711 - IDEFIX_I LTR Gypsy -1395 4233 2814 5 598 6712 17 3 0 chr3RHet 1728790 1729573 -787934 - IDEFIX_I LTR Gypsy -2941 2687 1903 5 598 2206 45 21 3 chr3RHet 1729549 1729840 -787667 - IDEFIX_I LTR Gypsy -5332 296 1 5 598 25 0 0 0 chr3RHet 1730200 1730225 -787282 + AT_rich Low_complexity Low_complexity 1 25 0 5 598 4645 34 2 37 chr3RHet 1730415 1731031 -786476 - IDEFIX_LTR LTR Gypsy 0 594 1 5 598 258 125 0 0 chr3RHet 1730999 1731039 -786468 + BARI1 DNA Tc1 3 42 -1708 5 598 287 149 0 0 chr3RHet 1731102 1731149 -786358 + GTWIN_I LTR Gypsy 4931 4977 -1444 5 598 22 0 0 0 chr3RHet 1731189 1731211 -786296 + AT_rich Low_complexity Low_complexity 1 22 0 5 598 205 191 0 0 chr3RHet 1731266 1731308 -786199 + A-rich Low_complexity Low_complexity 1 42 0 5 598 307 260 9 71 chr3RHet 1731436 1731548 -785959 + MDG1_I LTR Gypsy 1358 1462 -5134 5 598 980 214 109 17 chr3RHet 1731662 1732040 -785467 + MDG1_I LTR Gypsy 1661 2144 -4452 5 598 287 151 19 0 chr3RHet 1732040 1732093 -785414 + DMLTR5 LTR Gypsy 1 54 -212 5 598 697 41 380 0 chr3RHet 1732103 1732245 -785262 + HMSBEAGLE_I LTR Gypsy 44 240 -6289 5 598 809 116 28 120 chr3RHet 1732235 1732451 -785056 + HMSBEAGLE_I LTR Gypsy 532 727 -5802 5 598 208 234 0 0 chr3RHet 1732507 1732554 -784953 + (CAA)n Simple_repeat Simple_repeat 3 49 0 5 598 355 103 0 0 chr3RHet 1732554 1732622 -784885 + HMSBEAGLE_I LTR Gypsy 708 775 -5754 5 598 688 46 62 0 chr3RHet 1732625 1732755 -784752 + (TTA)n Simple_repeat Simple_repeat 3 140 0 5 598 7427 57 49 7 chr3RHet 1732755 1733811 -783696 + HMSBEAGLE_I LTR Gypsy 976 2107 -4422 5 598 17112 39 20 7 chr3RHet 1733824 1736002 -781505 - IDEFIX_I LTR Gypsy -3422 2206 1 5 598 25 0 0 0 chr3RHet 1736339 1736364 -781143 + AT_rich Low_complexity Low_complexity 1 25 0 5 598 4823 32 2 2 chr3RHet 1736534 1737128 -780379 - IDEFIX_LTR LTR Gypsy 0 594 1 5 598 258 125 0 0 chr3RHet 1737096 1737136 -780371 + BARI1 DNA Tc1 3 42 -1708 5 598 264 170 0 0 chr3RHet 1737199 1737246 -780261 + GTWIN_I LTR Gypsy 4931 4977 -1444 5 598 212 167 0 0 chr3RHet 1737364 1737406 -780101 + A-rich Low_complexity Low_complexity 1 42 0 5 598 315 231 105 65 chr3RHet 1737493 1737646 -779861 + MDG1_I LTR Gypsy 1304 1462 -5134 5 598 983 211 109 17 chr3RHet 1737760 1738138 -779369 + MDG1_I LTR Gypsy 1661 2144 -4452 5 598 255 170 19 0 chr3RHet 1738138 1738191 -779316 + DMLTR5 LTR Gypsy 1 54 -212 5 598 697 41 380 0 chr3RHet 1738201 1738343 -779164 + HMSBEAGLE_I LTR Gypsy 44 240 -6289 5 598 809 116 28 120 chr3RHet 1738333 1738549 -778958 + HMSBEAGLE_I LTR Gypsy 532 727 -5802 5 598 208 234 0 0 chr3RHet 1738605 1738652 -778855 + (CAA)n Simple_repeat Simple_repeat 3 49 0 5 598 355 103 0 0 chr3RHet 1738652 1738720 -778787 + HMSBEAGLE_I LTR Gypsy 708 775 -5754 5 598 688 46 62 0 chr3RHet 1738723 1738853 -778654 + (TTA)n Simple_repeat Simple_repeat 3 140 0 5 598 7410 58 49 7 chr3RHet 1738853 1739909 -777598 + HMSBEAGLE_I LTR Gypsy 976 2107 -4422 5 598 17205 37 20 7 chr3RHet 1739922 1742100 -775407 - IDEFIX_I LTR Gypsy -3422 2206 1 5 598 21 0 0 0 chr3RHet 1742506 1742527 -774980 + AT_rich Low_complexity Low_complexity 1 21 0 5 598 4656 30 3 37 chr3RHet 1742717 1743332 -774175 - IDEFIX_LTR LTR Gypsy 0 594 1 5 598 258 125 0 0 chr3RHet 1743300 1743340 -774167 + BARI1 DNA Tc1 3 42 -1708 5 598 264 170 0 0 chr3RHet 1743403 1743450 -774057 + GTWIN_I LTR Gypsy 4931 4977 -1444 5 598 212 167 0 0 chr3RHet 1743568 1743610 -773897 + A-rich Low_complexity Low_complexity 1 42 0 5 598 319 229 110 61 chr3RHet 1743697 1743860 -773647 + MDG1_I LTR Gypsy 1304 1474 -5122 5 598 980 216 109 17 chr3RHet 1743964 1744342 -773165 + MDG1_I LTR Gypsy 1661 2144 -4452 5 598 287 151 19 0 chr3RHet 1744342 1744395 -773112 + DMLTR5 LTR Gypsy 1 54 -212 5 598 1118 59 218 0 chr3RHet 1744405 1744656 -772851 + HMSBEAGLE_I LTR Gypsy 44 349 -6180 5 598 1688 73 0 8 chr3RHet 1744651 1744885 -772622 + HMSBEAGLE_I LTR Gypsy 258 489 -6040 5 598 1028 126 120 95 chr3RHet 1744924 1745241 -772266 + HMSBEAGLE_I LTR Gypsy 403 727 -5802 5 598 322 132 0 0 chr3RHet 1745341 1745409 -772098 + HMSBEAGLE_I LTR Gypsy 708 775 -5754 5 598 560 23 59 44 chr3RHet 1745412 1745548 -771959 + (TTA)n Simple_repeat Simple_repeat 3 140 0 5 598 22 0 0 0 chr3RHet 1745548 1745570 -771937 + AT_rich Low_complexity Low_complexity 1 22 0 5 598 4795 12 33 0 chr3RHet 1745570 1746145 -771362 - IDEFIX_LTR LTR Gypsy 0 594 1 5 598 25882 20 2 2 chr3RHet 1746145 1749291 -768216 - IDEFIX_I LTR Gypsy 0 5628 2485 5 598 41640 1 0 0 chr3RHet 1749296 1753916 -763591 - FW_DM LINE Jockey 0 4692 75 5 598 21385 16 1 6 chr3RHet 1753921 1756435 -761072 - IDEFIX_I LTR Gypsy -3127 2501 1 5 598 25 0 0 0 chr3RHet 1756877 1756902 -760605 + AT_rich Low_complexity Low_complexity 1 25 0 5 598 4669 12 46 0 chr3RHet 1757092 1757660 -759847 - IDEFIX_LTR LTR Gypsy 0 594 1 5 598 273 119 0 0 chr3RHet 1757628 1757670 -759837 + BARI1 DNA Tc1 3 44 -1706 5 598 423 65 65 0 chr3RHet 1757680 1757773 -759734 + (TTA)n Simple_repeat Simple_repeat 3 101 0 5 598 7680 68 105 3 chr3RHet 1757773 1760065 -757442 + HMSBEAGLE_I LTR Gypsy 976 3501 -3028 5 598 3059 77 0 0 chr3RHet 1760064 1760454 -757053 + HMSBEAGLE_I LTR Gypsy 4263 4652 -1877 5 598 4453 69 2 0 chr3RHet 1760452 1761016 -756491 + HMSBEAGLE_I LTR Gypsy 4518 5082 -1447 5 598 801 196 11 26 chr3RHet 1761071 1761260 -756247 + MDG1_I LTR Gypsy 2895 3080 -3516 5 598 311 212 54 131 chr3RHet 1761270 1761400 -756107 + Gypsy8_LTR LTR Gypsy 1 120 -184 5 598 349 151 27 0 chr3RHet 1761447 1761520 -755987 + Gypsy8_I LTR Gypsy 5 79 -4268 5 598 2056 216 143 1 chr3RHet 1762064 1762821 -754686 + MDG1_I LTR Gypsy 3562 4469 -2144 5 598 330 306 18 9 chr3RHet 1762853 1762962 -754545 + Gypsy_LTR LTR Gypsy 29 138 -344 5 598 284 209 52 121 chr3RHet 1763205 1763379 -754128 - HELENA LINE Jockey 0 661 500 5 598 6345 202 45 24 chr3RHet 1763375 1764694 -752813 + Gypsy_I LTR Gypsy 966 2313 -4194 5 598 325 0 24 0 chr3RHet 1764690 1764731 -752776 - Invader4_I LTR Gypsy -1447 966 925 5 598 606 233 43 30 chr3RHet 1764729 1765001 -752506 + Invader4_I LTR Gypsy 937 1210 -1976 5 598 8511 33 42 3 chr3RHet 1764985 1766274 -751233 + Invader4_I LTR Gypsy 1021 2413 0 5 598 2955 32 0 0 chr3RHet 1766274 1766620 -750887 + Invader4_LTR LTR Gypsy 1 346 0 5 598 12231 90 3 2 chr3RHet 1766626 1768359 -749148 + S_DM DNA Tc1 1 1736 0 5 598 359 162 0 29 chr3RHet 1768359 1768428 -749079 + MDG1_I LTR Gypsy 4544 4610 -1986 5 598 4006 184 78 42 chr3RHet 1768417 1769477 -748030 + DM412 LTR Gypsy 5085 6182 -715 5 598 3445 30 200 0 chr3RHet 1769480 1769939 -747568 + PROTOP_A DNA P 1 551 -554 5 598 811 50 0 0 chr3RHet 1769938 1770037 -747470 + PROTOP_A DNA P 933 1031 -74 5 598 1230 21 0 0 chr3RHet 1770036 1770177 -747330 - PROTOP_A DNA P -964 141 1 5 598 1373 31 0 0 chr3RHet 1770177 1770338 -747169 - PROTOP_A DNA P -944 161 1 5 598 422 20 0 0 chr3RHet 1770338 1770387 -747120 + PROTOP_A DNA P 1055 1104 -1 5 598 558 185 61 44 chr3RHet 1770387 1770568 -746939 + Gypsy11_I LTR Gypsy 2988 3171 -353 5 598 323 100 0 0 chr3RHet 1770627 1770677 -746830 + DM297_LTR LTR Gypsy 365 414 0 5 598 319 168 103 119 chr3RHet 1770685 1771025 -746482 + DM297_I LTR Gypsy 13 330 -5782 5 598 23 33 0 0 chr3RHet 1771039 1771069 -746438 + AT_rich Low_complexity Low_complexity 1 30 0 5 598 6052 168 46 17 chr3RHet 1771111 1772406 -745101 + DM297_I LTR Gypsy 340 1671 -4496 5 598 21 0 0 0 chr3RHet 1772406 1772427 -745080 + AT_rich Low_complexity Low_complexity 1 21 0 5 598 4922 164 77 34 chr3RHet 1772427 1773702 -743805 + DM297_I LTR Gypsy 2130 3882 -2702 5 598 1234 125 0 0 chr3RHet 1773697 1773897 -743610 + DM297_I LTR Gypsy 3579 3778 -2389 5 598 2960 52 0 0 chr3RHet 1774567 1774934 -742573 + FW_DM LINE Jockey 93 459 -4233 5 598 6441 42 76 1 chr3RHet 1774932 1776063 -741444 + DMCR1A LINE CR1 3254 4469 -1 5 598 372 311 217 20 chr3RHet 1776066 1776509 -740998 - MICROPIA_I LTR Gypsy -2797 1679 1150 5 598 377 354 29 20 chr3RHet 1776531 1776874 -740633 - MICROPIA_I LTR Gypsy -3385 1091 746 5 598 2331 134 31 33 chr3RHet 1776990 1777414 -740093 - Invader1_LTR LTR Gypsy 0 423 1 5 598 35 0 0 0 chr3RHet 1777474 1777509 -739998 + AT_rich Low_complexity Low_complexity 1 35 0 5 598 709 79 10 0 chr3RHet 1777509 1777610 -739897 + DMRT1C LINE R1 3489 3590 -1853 5 598 825 62 208 0 chr3RHet 1777608 1777752 -739755 - DOC5_DM LINE Jockey -4092 590 417 5 598 270 200 42 14 chr3RHet 1777749 1777820 -739687 + DMRT1B LINE R1 298 370 -4813 5 598 10659 49 2 40 chr3RHet 1777816 1779356 -738151 + Gypsy7_I LTR Gypsy 17 1498 -3486 5 598 37119 21 10 0 chr3RHet 1779356 1783886 -733621 + FW_DM LINE Jockey 111 4685 -7 5 598 2680 121 42 30 chr3RHet 1784216 1784719 -732788 + DNAREP1_DM LINE Penelope 86 594 0 5 598 225 322 60 27 chr3RHet 1785075 1785225 -732282 + NOMAD_I LTR Gypsy 1408 1562 -5010 5 598 294 211 28 19 chr3RHet 1785328 1785434 -732073 + A-rich Low_complexity Low_complexity 4 110 0 5 598 568 309 116 11 chr3RHet 1785878 1786163 -731344 + NOMAD_I LTR Gypsy 6048 6362 -210 5 598 488 321 0 0 chr3RHet 1787262 1787424 -730083 - NOMAD_I LTR Gypsy -233 6339 6178 5 598 34933 25 16 0 chr3RHet 1787491 1792099 -725408 - DMRT1B LINE R1 -463 4720 1 5 598 3400 33 78 0 chr3RHet 1792474 1792923 -724584 + Invader2_I LTR Gypsy 820 1303 -3289 5 598 6457 38 17 18 chr3RHet 1792928 1793830 -723677 + Invader2_I LTR Gypsy 1624 2524 -2068 5 598 2151 22 11 32 chr3RHet 1793829 1794111 -723396 + DIVER2_LTR LTR Pao 110 385 0 5 598 940 60 361 0 chr3RHet 1794113 1794326 -723181 + DIVER2_I LTR Pao 3 292 -3855 5 598 9543 38 21 18 chr3RHet 1794319 1795577 -721930 + DIVER2_I LTR Pao 482 1743 -2404 5 598 1153 28 7 0 chr3RHet 1795577 1795722 -721785 + DIVER2_I LTR Pao 1905 2050 -2097 5 598 12980 25 4 7 chr3RHet 1795722 1797317 -720190 + DIVER2_I LTR Pao 2167 3756 -391 5 598 3142 24 0 0 chr3RHet 1797345 1797722 -719785 + DIVER2_LTR LTR Pao 1 377 -8 5 598 13239 37 49 3 chr3RHet 1797723 1799557 -717950 + Invader2_I LTR Gypsy 2674 4592 0 5 598 1628 81 25 58 chr3RHet 1799557 1799832 -717675 + Invader2_LTR LTR Gypsy 1 266 0 5 598 257 286 14 28 chr3RHet 1800182 1800326 -717181 + (TTTG)n Simple_repeat Simple_repeat 4 145 0 5 598 2135 320 15 21 chr3RHet 1800435 1801351 -716156 - NOMAD_I LTR Gypsy -1030 5542 4632 5 598 589 305 0 0 chr3RHet 1801597 1801784 -715723 - NOMAD_I LTR Gypsy -5010 1562 1376 5 598 23 0 0 0 chr3RHet 1802351 1802374 -715133 + AT_rich Low_complexity Low_complexity 1 23 0 5 598 341 178 27 0 chr3RHet 1802506 1802579 -714928 + Invader6_I LTR Gypsy 866 940 -3159 5 598 21445 52 36 8 chr3RHet 1802583 1805514 -711993 - DMCR1A LINE CR1 0 4470 1460 5 598 627 85 11 21 chr3RHet 1805546 1805734 -711773 + DNAREP1_DM LINE Penelope 182 405 -189 5 598 29 0 0 0 chr3RHet 1805988 1806017 -711490 + AT_rich Low_complexity Low_complexity 1 29 0 5 598 22 88 0 0 chr3RHet 1806540 1806597 -710910 + AT_rich Low_complexity Low_complexity 1 57 0 5 598 24 32 0 0 chr3RHet 1806742 1806773 -710734 + AT_rich Low_complexity Low_complexity 1 31 0 5 598 376 111 247 0 chr3RHet 1806899 1806980 -710527 - Rehavkus-1_DY DNA Tc1 0 5917 5817 5 598 274 213 93 63 chr3RHet 1806981 1807356 -710151 + FB4_DM DNA Tc1 3311 3699 -390 5 598 768 137 155 0 chr3RHet 1807377 1807545 -709962 - Rehavkus-1_DY DNA Tc1 -5342 273 80 5 598 21 0 0 0 chr3RHet 1807998 1808019 -709488 + AT_rich Low_complexity Low_complexity 1 21 0 5 598 24 0 0 0 chr3RHet 1808100 1808124 -709383 + AT_rich Low_complexity Low_complexity 1 24 0 5 598 3283 110 40 2 chr3RHet 1808788 1809336 -708171 - S_DM DNA Tc1 0 1736 1168 5 598 1656 88 43 7 chr3RHet 1809335 1809634 -707873 + S_DM DNA Tc1 1427 1736 0 5 598 396 104 0 0 chr3RHet 1809735 1809802 -707705 + (TA)n Simple_repeat Simple_repeat 2 68 0 5 598 3869 32 90 1 chr3RHet 1810172 1811017 -706490 - PROTOP_A DNA P 0 1105 186 5 598 4063 50 110 9 chr3RHet 1811021 1812232 -705275 + TC1_DM DNA Tc1 304 1666 0 5 598 2943 34 39 0 chr3RHet 1812237 1812621 -704886 - PROTOP DNA P -4081 399 1 5 598 32 75 0 0 chr3RHet 1812851 1812918 -704589 + AT_rich Low_complexity Low_complexity 1 67 0 5 598 370 116 123 28 chr3RHet 1813441 1813619 -703888 - DNAREP1_DM LINE Penelope -305 289 117 5 598 518 202 17 0 chr3RHet 1813641 1813760 -703747 - DNAREP1_DM LINE Penelope -459 135 15 5 598 21 0 0 0 chr3RHet 1814059 1814080 -703427 + AT_rich Low_complexity Low_complexity 1 21 0 5 598 501 152 87 8 chr3RHet 1814524 1814650 -702857 + DM297_LTR LTR Gypsy 279 414 0 5 598 3911 177 110 23 chr3RHet 1814686 1815694 -701813 + DM297_I LTR Gypsy 359 1454 -4713 5 598 3698 162 213 3 chr3RHet 1815702 1816690 -700817 + DM297_I LTR Gypsy 1982 3176 -2991 5 598 4811 22 2 0 chr3RHet 1816690 1817276 -700231 + PROTOP DNA P 1 587 -3893 5 598 22778 18 4 0 chr3RHet 1817285 1820093 -697414 + PROTOP DNA P 1662 4480 0 5 598 1664 134 92 3 chr3RHet 1820093 1820407 -697100 + DM297_I LTR Gypsy 3170 3511 -2656 5 598 1085 108 303 4 chr3RHet 1820455 1820727 -696780 + DNAREP1_DM LINE Penelope 242 594 0 5 598 43 71 0 0 chr3RHet 1821559 1821644 -695863 + AT_rich Low_complexity Low_complexity 1 85 0 5 598 364 42 0 0 chr3RHet 1822716 1822764 -694743 + TC1-2_DM DNA Tc1 588 635 -1009 5 598 1911 53 16 19 chr3RHet 1822771 1823079 -694428 + TC1-2_DM DNA Tc1 1338 1644 0 5 598 22 0 0 0 chr3RHet 1823621 1823643 -693864 + AT_rich Low_complexity Low_complexity 1 22 0 5 598 483 155 0 0 chr3RHet 1824560 1824644 -692863 - DNAREP1_DM LINE Penelope -22 572 489 5 598 1238 117 161 3 chr3RHet 1824971 1825262 -692245 - DNAREP1_DM LINE Penelope -82 512 176 5 598 840 150 204 40 chr3RHet 1825232 1825517 -691990 - DNAREP1_DM LINE Penelope -262 332 1 5 598 273 57 0 0 chr3RHet 1825545 1825580 -691927 + Baggins1 LINE LOA 2 36 -5417 5 598 5997 54 164 6 chr3RHet 1825584 1826460 -691047 + Baggins1 LINE LOA 139 1153 -4300 5 598 201 100 50 0 chr3RHet 1826859 1826899 -690608 + (CTA)n Simple_repeat Simple_repeat 3 44 0 5 598 3209 60 148 3 chr3RHet 1826900 1827775 -689732 + Baggins1 LINE LOA 1897 2898 -2555 5 598 811 346 68 23 chr3RHet 1827791 1828673 -688834 + Gypsy4_I LTR Gypsy 5075 5996 -292 5 598 3024 280 65 13 chr3RHet 1829824 1831128 -686379 + Gypsy4_I LTR Gypsy 1873 3244 -3044 5 598 603 251 57 0 chr3RHet 1831269 1831444 -686063 + Gypsy4_I LTR Gypsy 3835 4019 -2269 5 598 1121 277 21 24 chr3RHet 1831481 1831947 -685560 + Gypsy4_I LTR Gypsy 4280 4744 -1544 5 598 541 304 34 30 chr3RHet 1832090 1832519 -684988 + Gypsy4_I LTR Gypsy 5075 5394 -894 5 598 582 333 20 35 chr3RHet 1832625 1833082 -684425 + Gypsy10_I LTR Gypsy 4672 5062 -216 5 598 201 100 50 0 chr3RHet 1833682 1833722 -683785 + (CTA)n Simple_repeat Simple_repeat 3 44 0 5 74 12184 52 100 31 chr3RHet 1833723 1835653 -681854 + Baggins1 LINE LOA 1897 3961 -1492 5 599 1034 31 0 0 chr3RHet 1835680 1835807 -681700 - Baggins1 LINE LOA -6 5447 5321 5 599 1710 62 25 0 chr3RHet 1835805 1836045 -681462 - Baggins1 LINE LOA -2604 2849 2604 5 599 1190 136 149 17 chr3RHet 1836687 1837264 -680243 - DNAREP1_DM LINE Penelope 0 594 80 5 599 860 111 0 0 chr3RHet 1837268 1837403 -680104 - DNAREP1_DM LINE Penelope -459 135 1 5 599 617 116 0 0 chr3RHet 1837409 1837504 -680003 - DNAREP1_DM LINE Penelope 0 594 500 5 599 635 343 68 23 chr3RHet 1838565 1839128 -678379 + Gypsy_I LTR Gypsy 1081 1805 -5207 5 599 755 302 75 0 chr3RHet 1839529 1839866 -677641 + Gypsy_I LTR Gypsy 2460 2927 -3580 5 599 1377 335 52 29 chr3RHet 1839892 1840883 -676624 + Gypsy2_I LTR Gypsy 3073 4085 -2050 5 599 417 256 73 62 chr3RHet 1840887 1841079 -676428 + Gypsy4_I LTR Gypsy 4316 4509 -1779 5 599 3209 43 13 5 chr3RHet 1841083 1841531 -675976 - TC1-2_DM DNA Tc1 0 1644 1193 5 599 3959 58 5 5 chr3RHet 1841530 1842085 -675422 - TC1-2_DM DNA Tc1 -738 906 352 5 599 864 192 16 0 chr3RHet 1842094 1842281 -675226 - MDG1_I LTR Gypsy -4524 2072 1883 5 599 850 163 114 22 chr3RHet 1842288 1842680 -674827 + DNAREP1_DM LINE Penelope 7 332 -262 5 599 256 133 333 0 chr3RHet 1842683 1842758 -674749 + PENELOPE LINE Penelope 3946 4045 -116 5 599 516 101 0 0 chr3RHet 1842724 1842803 -674704 + DNAREP1_DM LINE Penelope 516 594 0 5 599 415 264 15 23 chr3RHet 1842866 1842998 -674509 + HMSBEAGLE_I LTR Gypsy 1638 1768 -4761 5 599 345 93 0 0 chr3RHet 1843818 1843872 -673635 + (TAA)n Simple_repeat Simple_repeat 3 56 0 5 599 1873 94 74 3 chr3RHet 1843877 1844175 -673332 + MDG1_LTR LTR Gypsy 94 412 -30 5 599 7267 76 31 13 chr3RHet 1844175 1845286 -672221 + MDG1_I LTR Gypsy 1 1132 -5464 5 599 7255 46 21 2 chr3RHet 1845358 1846347 -671160 + MDG1_I LTR Gypsy 1127 2134 -4462 5 599 880 38 0 8 chr3RHet 1846360 1846493 -671014 - DOC5_DM LINE Jockey -147 4535 4404 5 599 1867 46 63 3 chr3RHet 1846479 1846765 -670742 - DOC5_DM LINE Jockey -200 4482 4180 5 599 402 56 0 0 chr3RHet 1846760 1846814 -670693 - DOC5_DM LINE Jockey -703 3979 3926 5 599 351 105 0 0 chr3RHet 1846829 1846886 -670621 + (TAA)n Simple_repeat Simple_repeat 3 59 0 5 599 1882 91 74 3 chr3RHet 1846888 1847186 -670321 + MDG1_LTR LTR Gypsy 94 412 -30 5 599 38328 4 3 3 chr3RHet 1847887 1852396 -665111 - DOC LINE Jockey 0 4725 219 5 599 337 304 116 23 chr3RHet 1852838 1853010 -664497 + G2_DM LINE Jockey 1893 2080 -1022 5 599 581 94 0 0 chr3RHet 1853303 1853388 -664119 - PROTOP DNA P -1 4479 4393 5 599 380 214 13 23 chr3RHet 1853396 1853569 -663938 - PROTOP DNA P -190 4290 4121 5 599 25 65 0 0 chr3RHet 1853690 1853736 -663771 + AT_rich Low_complexity Low_complexity 1 46 0 5 599 1134 106 138 0 chr3RHet 1853767 1853984 -663523 + DNAREP1_DM LINE Penelope 2 248 -346 5 599 361 59 0 0 chr3RHet 1853987 1854038 -663469 + DNAREP1_DM LINE Penelope 529 579 -15 5 599 18786 43 75 18 chr3RHet 1854249 1856935 -660572 + G4_DM LINE Jockey 1 2839 -1017 5 599 6837 38 2 2 chr3RHet 1856935 1857816 -659691 + G4_DM LINE Jockey 2976 3856 0 5 599 2237 15 3 36 chr3RHet 1857878 1858193 -659314 - ROVER-LTR_DM LTR Gypsy 0 367 1 5 599 19613 9 2 21 chr3RHet 1858193 1860737 -656770 - ROVER-I_DM LTR Gypsy 0 6584 4090 5 599 3856 13 0 61 chr3RHet 1860758 1861265 -656242 - MICROPIA_LTR LTR Gypsy 0 476 1 5 599 4998 14 75 6 chr3RHet 1861265 1861916 -655591 - MICROPIA_I LTR Gypsy 0 4476 3781 5 599 3293 153 31 93 chr3RHet 1866569 1867461 -650046 + Gypsy12A_LTR LTR Gypsy 1444 2280 0 5 599 324 235 0 0 chr3RHet 1867746 1867831 -649676 - Ulysses_I LTR Gypsy -1599 4782 4698 5 599 233 295 10 10 chr3RHet 1867846 1867942 -649565 - Ulysses_I LTR Gypsy -1762 4619 4524 5 599 280 209 14 114 chr3RHet 1868911 1869133 -648374 + Gypsy8_I LTR Gypsy 4170 4347 0 5 599 627 173 170 98 chr3RHet 1869134 1869406 -648101 + Gypsy8_LTR LTR Gypsy 1 292 -12 5 599 293 200 13 0 chr3RHet 1869406 1869481 -648026 + Gypsy8_I LTR Gypsy 4 79 -4268 5 599 813 307 182 4 chr3RHet 1869985 1870535 -646972 - Ulysses_I LTR Gypsy -532 5849 5202 5 599 1773 199 24 28 chr3RHet 1870552 1871134 -646373 + Gypsy12A_LTR LTR Gypsy 1 550 -1786 5 599 4369 169 84 72 chr3RHet 1871163 1872575 -644932 + Gypsy12A_LTR LTR Gypsy 915 2336 0 5 599 324 235 0 0 chr3RHet 1872860 1872945 -644562 - Ulysses_I LTR Gypsy -1599 4782 4698 5 599 233 295 10 10 chr3RHet 1872960 1873056 -644451 - Ulysses_I LTR Gypsy -1762 4619 4524 5 599 290 204 14 114 chr3RHet 1874025 1874247 -643260 + Gypsy8_I LTR Gypsy 4170 4347 0 5 599 627 173 170 98 chr3RHet 1874248 1874520 -642987 + Gypsy8_LTR LTR Gypsy 1 292 -12 5 599 293 200 13 0 chr3RHet 1874520 1874595 -642912 + Gypsy8_I LTR Gypsy 4 79 -4268 5 599 700 306 182 4 chr3RHet 1875099 1875649 -641858 - Ulysses_I LTR Gypsy -532 5849 5202 5 599 1793 191 26 28 chr3RHet 1875666 1876247 -641260 + Gypsy12A_LTR LTR Gypsy 1 550 -1786 5 599 4553 165 102 78 chr3RHet 1876280 1877708 -639799 + Gypsy12A_LTR LTR Gypsy 819 2280 0 5 599 1031 311 125 33 chr3RHet 1877993 1878913 -638594 - Ulysses_I LTR Gypsy -1599 4782 3778 5 599 2349 76 6 0 chr3RHet 1879129 1879457 -638050 - STALKER4_LTR LTR Gypsy -28 374 45 5 599 9263 115 55 21 chr3RHet 1879471 1881439 -636068 - STALKER4_I LTR Gypsy -308 6589 4732 5 599 3866 95 16 33 chr3RHet 1881432 1882073 -635434 + CIRCE LINE Composite 3508 4137 -2219 5 599 6475 44 0 5 chr3RHet 1882117 1882965 -634542 + CIRCE LINE Composite 4137 4980 -1376 5 599 1403 61 10 0 chr3RHet 1883055 1883251 -634256 - Stalker2_I LTR Gypsy -2732 4670 4473 5 599 13586 98 28 10 chr3RHet 1883250 1885382 -632125 - STALKER4_I LTR Gypsy -2631 3899 1730 5 599 883 203 97 12 chr3RHet 1885386 1885715 -631792 - STALKER4_I LTR Gypsy -5377 1153 797 5 599 240 314 19 19 chr3RHet 1885867 1886029 -631478 - HMSBEAGLE_I LTR Gypsy -779 5750 5589 5 599 36 23 0 0 chr3RHet 1886312 1886355 -631152 + AT_rich Low_complexity Low_complexity 1 43 0 5 599 13615 42 10 3 chr3RHet 1886360 1888122 -629385 + DMCR1A LINE CR1 2 1775 -2695 5 599 14132 23 41 12 chr3RHet 1888168 1889918 -627589 - DMCR1A LINE CR1 0 4470 2671 5 599 696 324 84 31 chr3RHet 1889913 1890486 -627021 - HMSBEAGLE_I LTR Gypsy -2291 4238 3636 5 599 473 334 114 16 chr3RHet 1890499 1890937 -626570 - HMSBEAGLE_I LTR Gypsy -2946 3583 3103 5 599 24 0 0 0 chr3RHet 1891023 1891047 -626460 + AT_rich Low_complexity Low_complexity 1 24 0 5 599 302 301 9 9 chr3RHet 1891281 1891395 -626112 - HMSBEAGLE_I LTR Gypsy -3766 2763 2650 5 599 698 353 14 3 chr3RHet 1891955 1892313 -625194 - HMSBEAGLE_I LTR Gypsy -4456 2073 1712 5 599 267 307 0 0 chr3RHet 1892377 1892478 -625029 - HMSBEAGLE_I LTR Gypsy -4913 1616 1516 5 599 44 63 0 0 chr3RHet 1892892 1892971 -624536 + AT_rich Low_complexity Low_complexity 1 79 0 5 599 21 36 0 0 chr3RHet 1893297 1893325 -624182 + AT_rich Low_complexity Low_complexity 1 28 0 5 599 581 133 198 8 chr3RHet 1893420 1893541 -623966 + DNAREP1_DM LINE Penelope 449 592 -2 5 599 2149 116 208 6 chr3RHet 1893549 1894043 -623464 + DNAREP1_DM LINE Penelope 1 593 -1 5 599 4025 54 64 2 chr3RHet 1894093 1895014 -622493 + PROTOP_B DNA P 129 1153 0 5 599 693 85 600 22 chr3RHet 1895526 1895696 -621811 - DNAREP1_DM LINE Penelope -326 268 1 5 599 21 71 0 0 chr3RHet 1896781 1896823 -620684 + AT_rich Low_complexity Low_complexity 1 42 0 5 599 627 227 91 14 chr3RHet 1897169 1897379 -620128 + DNAREP1_DM LINE Penelope 4 229 -365 5 599 1361 131 186 0 chr3RHet 1897396 1897754 -619753 + DNAREP1_DM LINE Penelope 1 572 -22 5 599 289 174 141 65 chr3RHet 1898002 1898094 -619413 + DNAREP1_DM LINE Penelope 496 594 0 5 599 246 154 154 0 chr3RHet 1898319 1898371 -619136 - DNAREP1_DM LINE Penelope -525 69 10 5 599 324 246 208 14 chr3RHet 1898402 1898546 -618961 + PROTOP_A DNA P 1 172 -933 5 599 25 51 0 0 chr3RHet 1899632 1899671 -617836 + AT_rich Low_complexity Low_complexity 1 39 0 5 599 25 31 0 0 chr3RHet 1899901 1899933 -617574 + AT_rich Low_complexity Low_complexity 1 32 0 5 599 307 104 221 15 chr3RHet 1900044 1900112 -617395 + Invader6_I LTR Gypsy 866 947 -3152 5 599 586 139 10 0 chr3RHet 1900117 1900218 -617289 + DNAREP1_DM LINE Penelope 138 239 -355 5 599 485 254 196 19 chr3RHet 1900217 1900482 -617025 + NOMAD_I LTR Gypsy 6261 6572 0 5 599 403 33 250 0 chr3RHet 1901622 1901682 -615825 + PROTOP_B DNA P 1 75 -1078 5 599 5455 69 14 21 chr3RHet 1901680 1902608 -614899 + PROTOP_B DNA P 136 1063 -42 5 599 3090 32 35 0 chr3RHet 1902864 1903237 -614270 - ROOA_LTR LTR Pao 0 386 1 5 599 9587 49 97 24 chr3RHet 1903439 1904832 -612675 - ROOA_I LTR Pao -7 6842 5349 5 599 225 252 151 28 chr3RHet 1904942 1905048 -612459 - ROOA_I LTR Pao -1164 5685 5567 5 599 40079 42 30 19 chr3RHet 1905276 1910485 -607022 - ROOA_I LTR Pao -1503 5346 78 5 599 241 31 0 0 chr3RHet 1910483 1910515 -606992 - ROOA_LTR LTR Pao -354 32 1 5 599 21 57 0 0 chr3RHet 1910788 1910823 -606684 + AT_rich Low_complexity Low_complexity 1 35 0 5 599 51 65 0 0 chr3RHet 1911018 1911111 -606396 + AT_rich Low_complexity Low_complexity 1 93 0 5 599 31 26 0 0 chr3RHet 1912122 1912160 -605347 + AT_rich Low_complexity Low_complexity 1 38 0 5 599 906 108 18 0 chr3RHet 1912663 1912829 -604678 + TLD2 Unknown Unknown 50 218 0 5 599 262 318 20 14 chr3RHet 1912815 1912982 -604525 + ACCORD_I LTR Gypsy 3569 3722 -1824 5 599 946 154 167 9 chr3RHet 1913078 1913288 -604219 + FW_DM LINE Jockey 117 359 -4333 5 599 1028 68 7 0 chr3RHet 1913288 1913434 -604073 + ZAM_LTR LTR Gypsy 1 147 -325 5 599 8375 68 10 7 chr3RHet 1913455 1914579 -602928 + ZAM_I LTR Gypsy 1223 2349 -5141 5 599 5493 61 7 1 chr3RHet 1914570 1915307 -602200 + ZAM_I LTR Gypsy 2551 3291 -4199 5 599 15850 52 11 0 chr3RHet 1915310 1917302 -600205 + ZAM_I LTR Gypsy 3462 5476 -2014 5 599 9888 49 52 1 chr3RHet 1917306 1918607 -598900 + ZAM_I LTR Gypsy 6122 7488 -2 5 599 2355 163 42 22 chr3RHet 1918608 1919142 -598365 + ZAM_LTR LTR Gypsy 3 472 0 5 599 1630 182 97 12 chr3RHet 1919143 1919769 -597738 + FW_DM LINE Jockey 356 1034 -3658 5 599 2651 35 6 0 chr3RHet 1919767 1920084 -597423 - DOC3_DM LINE Jockey -629 4111 3793 5 599 24430 41 46 2 chr3RHet 1920093 1923282 -594225 - DOC3_DM LINE Jockey -1075 3665 261 5 599 30 0 0 0 chr3RHet 1923336 1923366 -594141 + AT_rich Low_complexity Low_complexity 1 30 0 5 599 2625 272 35 13 chr3RHet 1924361 1925199 -592308 - Copia2_I LTR Copia -97 4065 3210 5 599 370 353 0 0 chr3RHet 1925654 1925824 -591683 - Copia2_I LTR Copia -2146 2016 1847 5 599 858 304 93 61 chr3RHet 1925836 1926653 -590854 - Copia2_I LTR Copia -2487 1675 833 5 599 269 298 19 37 chr3RHet 1926796 1926904 -590603 - DM1731_I LTR Copia -3328 648 543 5 599 439 310 0 0 chr3RHet 1927156 1927301 -590206 - DIVER2_I LTR Pao -477 3670 3526 5 599 310 244 0 0 chr3RHet 1927410 1927492 -590015 - DIVER2_I LTR Pao -788 3359 3278 5 599 296 340 90 4 chr3RHet 1927598 1927843 -589664 - DIVER2_I LTR Pao -1025 3122 2857 5 599 304 336 16 0 chr3RHet 1928194 1928319 -589188 - DIVER2_I LTR Pao -1621 2526 2400 5 599 318 274 39 10 chr3RHet 1929077 1929180 -588327 - DIVER2_I LTR Pao -1790 2357 2252 5 599 511 326 14 94 chr3RHet 1929566 1929992 -587515 - DIVER2_I LTR Pao -2346 1801 1410 5 599 1331 154 86 12 chr3RHet 1929861 1930117 -587390 - G3_DM LINE Jockey -4026 579 305 5 599 363 69 138 0 chr3RHet 1930125 1930183 -587324 - G3_DM LINE Jockey -4458 147 82 5 599 425 89 59 15 chr3RHet 1931026 1931094 -586413 - G3_DM LINE Jockey -4534 71 1 5 599 27 81 0 0 chr3RHet 1932160 1932222 -585285 + AT_rich Low_complexity Low_complexity 1 62 0 5 599 2617 17 0 0 chr3RHet 1932478 1932773 -584734 - PROTOP_A DNA P 0 1105 811 5 599 180 0 0 0 chr3RHet 1932773 1932793 -584714 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 599 6379 32 21 1 chr3RHet 1933054 1933861 -583646 + PROTOP DNA P 1 823 -3657 5 599 5858 15 0 0 chr3RHet 1933856 1934535 -582972 + PROTOP DNA P 3802 4480 0 5 599 313 109 0 0 chr3RHet 1934556 1934602 -582905 + IDEFIX_LTR LTR Gypsy 1 46 -548 5 599 748 239 7 97 chr3RHet 1934704 1934973 -582534 + IDEFIX_LTR LTR Gypsy 296 540 -54 5 599 240 111 22 0 chr3RHet 1936003 1936048 -581459 + HOBO DNA hAT 2710 2755 -261 5 599 437 195 16 41 chr3RHet 1936086 1936209 -581298 + HOBO DNA hAT 2897 3016 0 5 599 236 211 88 0 chr3RHet 1936309 1936366 -581141 + DNAREP1_DM LINE Penelope 396 457 -137 5 599 1766 96 80 34 chr3RHet 1936371 1936682 -580825 - DNAREP1_DM LINE Penelope -146 448 136 5 599 341 255 59 0 chr3RHet 1937590 1937692 -579815 - DNAREP1_DM LINE Penelope -149 445 338 5 599 7068 46 79 20 chr3RHet 1937921 1939400 -578107 + TC1-2_DM DNA Tc1 1 1567 -77 5 599 486 233 56 36 chr3RHet 1940051 1940247 -577260 - Gypsy3_LTR LTR Gypsy -161 237 38 5 599 609 280 56 63 chr3RHet 1940571 1940949 -576558 - ROO_I LTR Pao -3153 5103 4729 5 599 26 30 0 0 chr3RHet 1941182 1941215 -576292 + AT_rich Low_complexity Low_complexity 1 33 0 5 599 319 253 105 57 chr3RHet 1941562 1941809 -575698 - ROO_I LTR Pao -4306 3950 3692 5 599 260 299 22 7 chr3RHet 1941838 1941976 -575531 - ROO_I LTR Pao -4650 3606 3467 5 599 748 266 201 0 chr3RHet 1942343 1942745 -574762 - ROO_I LTR Pao -6190 2066 1584 5 599 22 0 0 0 chr3RHet 1943441 1943463 -574044 + AT_rich Low_complexity Low_complexity 1 22 0 5 599 289 181 38 49 chr3RHet 1943635 1943722 -573785 - ROO_I LTR Pao -6769 80 1 5 599 737 274 106 3 chr3RHet 1944106 1944476 -573031 - Jockey2 LINE Jockey -1021 3999 3670 5 599 335 226 0 2 chr3RHet 1944474 1944556 -572951 - Jockey2 LINE Jockey -2527 2493 2426 5 599 1655 284 67 10 chr3RHet 1944598 1945198 -572309 - Jockey2 LINE Jockey -2401 1027 394 5 599 2500 76 21 0 chr3RHet 1945202 1945531 -571976 - Gypsy9_LTR LTR Gypsy 0 336 1 5 599 681 267 130 8 chr3RHet 1945533 1945786 -571721 - LINEJ1_DM LINE Jockey -3445 1575 1292 5 599 25433 49 82 20 chr3RHet 1945819 1949261 -568246 + DOC3_DM LINE Jockey 11 3665 -1075 5 599 8114 35 8 3 chr3RHet 1949259 1950219 -567288 + DOC3_DM LINE Jockey 3776 4740 0 5 599 367 306 34 7 chr3RHet 1950274 1950422 -567085 - LINEJ1_DM LINE Jockey -3792 1228 1077 5 599 251 308 18 27 chr3RHet 1950688 1950798 -566709 - Jockey2 LINE Jockey -3071 357 249 5 599 905 95 289 5 chr3RHet 1951173 1951363 -566144 + DMCR1A LINE CR1 504 747 -3723 5 599 1162 106 9 61 chr3RHet 1951815 1952080 -565427 + DNAREP1_DM LINE Penelope 5 383 -211 5 599 256 178 301 0 chr3RHet 1952076 1952149 -565358 + DM176_I LTR Gypsy 4530 4624 -1796 5 599 1595 135 4 93 chr3RHet 1952248 1952609 -564898 + Gypsy8_LTR LTR Gypsy 1 304 0 5 599 296 213 125 21 chr3RHet 1952583 1952727 -564780 + Gypsy8_I LTR Gypsy 1 159 -4188 5 599 894 119 0 54 chr3RHet 1952759 1952927 -564580 + Gypsy8_I LTR Gypsy 72 230 -4117 5 599 1094 101 252 0 chr3RHet 1953592 1953849 -563658 - DNAREP1_DM LINE Penelope 0 594 273 5 599 22 70 0 0 chr3RHet 1953941 1953984 -563523 + AT_rich Low_complexity Low_complexity 1 43 0 5 599 8099 124 20 8 chr3RHet 1954116 1955386 -562121 - FW_DM LINE Jockey -8 4684 3399 5 599 965 172 32 11 chr3RHet 1955391 1955579 -561928 - FW_DM LINE Jockey -2098 2594 2403 5 599 624 53 0 0 chr3RHet 1955577 1955652 -561855 - FW_DM LINE Jockey -2720 1972 1898 5 599 702 170 71 0 chr3RHet 1955718 1955859 -561648 - FW_DM LINE Jockey -3105 1587 1437 5 599 251 308 18 27 chr3RHet 1955938 1956048 -561459 - Jockey2 LINE Jockey -3071 357 249 5 599 905 95 289 5 chr3RHet 1956423 1956613 -560894 + DMCR1A LINE CR1 504 747 -3723 5 599 1188 100 9 61 chr3RHet 1957065 1957330 -560177 + DNAREP1_DM LINE Penelope 5 383 -211 5 599 279 164 301 0 chr3RHet 1957326 1957399 -560108 + DM176_I LTR Gypsy 4530 4624 -1796 5 599 1547 141 4 93 chr3RHet 1957498 1957859 -559648 + Gypsy8_LTR LTR Gypsy 1 304 0 5 599 296 213 125 21 chr3RHet 1957833 1957977 -559530 + Gypsy8_I LTR Gypsy 1 159 -4188 5 599 898 119 0 54 chr3RHet 1958009 1958177 -559330 + Gypsy8_I LTR Gypsy 72 230 -4117 5 599 515 97 0 0 chr3RHet 1958836 1958908 -558599 - DNAREP1_DM LINE Penelope 0 594 523 5 599 2118 170 124 0 chr3RHet 1958907 1959611 -557896 - FW_DM LINE Jockey -3250 1442 652 5 599 2005 163 45 58 chr3RHet 1959633 1960082 -557425 - FW_DM LINE Jockey -4131 561 119 5 599 1243 126 62 9 chr3RHet 1960220 1960444 -557063 + DNAREP1_DM LINE Penelope 32 267 -327 5 599 870 158 209 0 chr3RHet 1960432 1960647 -556860 - DNAREP1_DM LINE Penelope -174 420 161 5 599 501 160 64 71 chr3RHet 1960644 1960837 -556670 + PROTOP_B DNA P 868 1110 -43 5 599 237 230 19 57 chr3RHet 1962426 1962532 -554975 + T-rich Low_complexity Low_complexity 3 104 0 5 599 2732 127 65 27 chr3RHet 1963129 1963645 -553862 - DNAREP1_DM LINE Penelope 0 594 88 5 599 22 56 0 0 chr3RHet 1964169 1964205 -553302 + AT_rich Low_complexity Low_complexity 1 36 0 5 599 373 266 8 8 chr3RHet 1964786 1964915 -552592 + DNAREP1_DM LINE Penelope 118 246 -348 5 599 555 165 72 18 chr3RHet 1964915 1965026 -552481 + PROTOP_B DNA P 1037 1153 0 5 600 24 77 0 0 chr3RHet 1967906 1967958 -549549 + AT_rich Low_complexity Low_complexity 1 52 0 5 600 852 169 86 96 chr3RHet 1969019 1969333 -548174 - Gypsy_LTR LTR Gypsy -20 462 152 5 600 13303 168 15 0 chr3RHet 1969335 1971537 -545970 - Gypsy_I LTR Gypsy -119 6388 4153 5 600 9549 152 13 5 chr3RHet 1971530 1973087 -544420 - Gypsy_I LTR Gypsy -2559 3948 2344 5 600 2049 156 0 43 chr3RHet 1973091 1973440 -544067 - Gypsy_I LTR Gypsy -4404 2103 1770 5 600 4731 219 3 8 chr3RHet 1973441 1974357 -543150 - Gypsy_I LTR Gypsy -5051 1456 545 5 600 11600 57 13 0 chr3RHet 1974374 1975808 -541699 + BS2 LINE Jockey 3246 4698 -23 5 600 1181 200 16 8 chr3RHet 1975809 1976056 -541451 - DM176_I LTR Gypsy -3298 3122 2874 5 600 442 171 45 45 chr3RHet 1976087 1976197 -541310 - DM176_I LTR Gypsy -3891 2529 2420 5 600 400 149 45 0 chr3RHet 1976194 1976261 -541246 - DM176_I LTR Gypsy -3602 2818 2749 5 600 477 173 139 43 chr3RHet 1976256 1976371 -541136 - DM176_I LTR Gypsy -3820 2600 2475 5 600 795 85 0 0 chr3RHet 1977218 1977324 -540183 + DNAREP1_DM LINE Penelope 1 106 -488 5 600 499 231 8 0 chr3RHet 1977340 1977457 -540050 - TOM_I LTR Gypsy -571 5541 5424 5 600 752 237 11 0 chr3RHet 1977466 1977656 -539851 - TOM_I LTR Gypsy -1112 5000 4809 5 600 4936 45 138 12 chr3RHet 1978108 1979567 -537940 + TC1-2_DM DNA Tc1 1 1644 0 5 600 2398 323 57 34 chr3RHet 1980692 1982290 -535217 - BLASTOPIA_I LTR Gypsy 0 4481 2847 5 600 3184 17 0 0 chr3RHet 1982292 1982648 -534859 - MDG1_LTR LTR Gypsy 0 442 87 5 600 423 100 0 0 chr3RHet 1982648 1982718 -534789 + (TTA)n Simple_repeat Simple_repeat 3 72 0 5 600 56957 7 22 2 chr3RHet 1982722 1989203 -528304 - MDG1_I LTR Gypsy -98 6799 1 5 600 3184 17 0 0 chr3RHet 1989203 1989559 -527948 - MDG1_LTR LTR Gypsy 0 442 87 5 600 423 100 0 0 chr3RHet 1989559 1989629 -527878 + (TTA)n Simple_repeat Simple_repeat 3 72 0 5 600 431 340 48 18 chr3RHet 1989823 1990155 -527352 - BLASTOPIA_I LTR Gypsy -1886 2595 2254 5 600 2316 23 8 0 chr3RHet 1990511 1990775 -526732 + Invader2_LTR LTR Gypsy 1 266 0 5 600 39978 12 5 0 chr3RHet 1990775 1995344 -522163 + Invader2_I LTR Gypsy 1 4592 0 5 600 2261 34 8 0 chr3RHet 1995344 1995608 -521899 + Invader2_LTR LTR Gypsy 1 266 0 5 600 23259 27 11 0 chr3RHet 1995892 1998561 -518946 + G5_DM LINE Jockey 1638 4335 -521 5 600 871 267 101 4 chr3RHet 1999435 1999702 -517805 - TOM_I LTR Gypsy -1312 4800 4508 5 600 1169 239 51 3 chr3RHet 1999688 1999999 -517508 - DM297_I LTR Gypsy -1632 4535 4210 5 600 486 167 0 0 chr3RHet 2000000 2000084 -517423 - DM297_I LTR Gypsy -1959 4208 4125 5 600 3572 270 92 39 chr3RHet 2000091 2002272 -515235 - TOM_I LTR Gypsy -3807 2305 1 5 600 1740 46 0 5 chr3RHet 2002276 2002495 -515012 - DMTOM1_LTR LTR Gypsy -3 407 190 5 600 47 0 0 0 chr3RHet 2002511 2002558 -514949 + AT_rich Low_complexity Low_complexity 1 47 0 5 600 31 82 0 0 chr3RHet 2003126 2003199 -514308 + AT_rich Low_complexity Low_complexity 1 73 0 5 600 25 0 0 0 chr3RHet 2004407 2004432 -513075 + AT_rich Low_complexity Low_complexity 1 25 0 5 600 231 175 73 73 chr3RHet 2004798 2004866 -512641 - Gypsy4_I LTR Gypsy -1897 4391 4324 5 600 589 332 20 20 chr3RHet 2005609 2006027 -511480 - Gypsy4_I LTR Gypsy -2361 3499 3119 5 600 8856 39 6 4 chr3RHet 2006049 2007151 -510356 - PROTOP_A DNA P 0 1105 1 5 600 765 322 35 27 chr3RHet 2007215 2007357 -510150 - Gypsy4_I LTR Gypsy -3066 3518 3216 5 600 1520 33 24 0 chr3RHet 2007357 2007570 -509937 - TLD2 Unknown Unknown 0 218 1 5 600 765 322 35 27 chr3RHet 2007570 2008017 -509490 - Gypsy4_I LTR Gypsy -3066 3215 2255 5 600 474 355 20 35 chr3RHet 2008981 2009389 -508118 - Gypsy4_I LTR Gypsy -5228 1784 1332 5 600 3330 51 1 15 chr3RHet 2009647 2010087 -507420 + STALKER4_LTR LTR Gypsy 1 399 -3 5 600 28 48 0 0 chr3RHet 2010171 2010213 -507294 + AT_rich Low_complexity Low_complexity 1 42 0 5 600 16315 52 35 12 chr3RHet 2010220 2012596 -504911 + STALKER4_I LTR Gypsy 291 2768 -3762 5 600 25113 7 7 0 chr3RHet 2012594 2015484 -502023 + STALKER4_I LTR Gypsy 3622 6530 0 5 600 2596 17 0 0 chr3RHet 2015484 2015781 -501726 + STALKER4_LTR LTR Gypsy 1 297 -105 5 600 299 121 0 49 chr3RHet 2015804 2015865 -501642 + Stalker3_LTR LTR Gypsy 315 372 0 5 600 224 224 11 56 chr3RHet 2016286 2016376 -501131 + T-rich Low_complexity Low_complexity 3 88 0 5 600 47 0 0 0 chr3RHet 2016646 2016693 -500814 + AT_rich Low_complexity Low_complexity 1 47 0 5 600 626 73 285 32 chr3RHet 2017137 2017291 -500216 - DMTOM1_LTR LTR Gypsy -217 193 1 5 600 657 77 44 0 chr3RHet 2017293 2017384 -500123 + DNAREP1_DM LINE Penelope 500 594 0 5 600 858 115 279 6 chr3RHet 2017382 2017563 -499944 + DNAREP1_DM LINE Penelope 256 486 -108 5 600 3065 88 5 16 chr3RHet 2017563 2018003 -499504 + Mariner2_DM DNA Tc1 1 435 -477 5 600 2431 54 0 6 chr3RHet 2018095 2018410 -499097 + Mariner2_DM DNA Tc1 598 910 -2 5 600 445 83 41 14 chr3RHet 2018412 2018485 -499022 + DNAREP1_DM LINE Penelope 504 578 -16 5 600 1414 128 52 0 chr3RHet 2020085 2020335 -497172 + DNAREP1_DM LINE Penelope 1 263 -331 5 600 1381 103 14 0 chr3RHet 2020327 2020617 -496890 - DNAREP1_DM LINE Penelope -174 420 1 5 600 22 35 0 0 chr3RHet 2021922 2021951 -495556 + AT_rich Low_complexity Low_complexity 1 29 0 5 600 27 29 0 0 chr3RHet 2022050 2022084 -495423 + AT_rich Low_complexity Low_complexity 1 34 0 5 600 401 252 83 8 chr3RHet 2022532 2022652 -494855 + DIVER2_I LTR Pao 3847 3975 -172 5 600 270 145 141 26 chr3RHet 2022645 2022723 -494784 - DM297_LTR LTR Gypsy -38 376 290 5 600 321 296 0 0 chr3RHet 2022715 2022813 -494694 - Gypsy3_I LTR Gypsy -2648 3529 3432 5 600 318 257 0 0 chr3RHet 2022812 2022886 -494621 - Gypsy6_I LTR Gypsy -3201 3811 3738 5 600 952 309 106 41 chr3RHet 2022893 2023846 -493661 - Gypsy3_I LTR Gypsy -4006 2171 1157 5 600 277 288 153 109 chr3RHet 2023840 2024160 -493347 - Gypsy2_I LTR Gypsy -4800 1335 1002 5 600 27 29 0 0 chr3RHet 2024421 2024455 -493052 + AT_rich Low_complexity Low_complexity 1 34 0 5 600 24 32 0 0 chr3RHet 2024492 2024523 -492984 + AT_rich Low_complexity Low_complexity 1 31 0 5 600 2487 116 25 27 chr3RHet 2024607 2025015 -492492 - Gypsy6A_LTR LTR Gypsy -6 414 8 5 600 1072 149 283 3 chr3RHet 2025102 2025387 -492120 - DNAREP1_DM LINE Penelope -179 415 52 5 600 398 189 21 10 chr3RHet 2027436 2027532 -489975 - DNAREP1_DM LINE Penelope -263 331 235 5 600 674 158 38 44 chr3RHet 2027526 2027685 -489822 - DNAREP1_DM LINE Penelope -259 335 178 5 600 254 262 12 23 chr3RHet 2027672 2027758 -489749 + DIVER2_I LTR Pao 3098 3182 -965 5 600 569 66 13 0 chr3RHet 2027964 2028040 -489467 + DMCR1A LINE CR1 475 551 -3919 5 600 12234 68 21 5 chr3RHet 2028029 2029651 -487856 + DMCR1A LINE CR1 796 2443 -2027 5 600 3160 113 69 45 chr3RHet 2030003 2030623 -486884 + QUASIMODO_LTR LTR Gypsy 1 635 -23 5 600 22 0 0 0 chr3RHet 2030637 2030659 -486848 + AT_rich Low_complexity Low_complexity 1 22 0 5 600 206 174 22 0 chr3RHet 2030800 2030846 -486661 + (TTA)n Simple_repeat Simple_repeat 3 49 0 5 600 721 289 75 26 chr3RHet 2031178 2031565 -485942 + Gypsy5_I LTR Gypsy 2304 2709 -3800 5 600 6284 146 121 3 chr3RHet 2031815 2032987 -484520 - DMCR1A LINE CR1 -516 3954 2644 5 600 6184 45 43 6 chr3RHet 2033001 2033788 -483719 - BS3_DM LINE Jockey 0 1790 975 5 600 999 107 40 0 chr3RHet 2033788 2033935 -483572 - DMCR1A LINE CR1 -1879 2591 2439 5 600 1509 100 139 4 chr3RHet 2033935 2034187 -483320 - DNAREP1_DM LINE Penelope 0 594 309 5 600 1759 19 14 0 chr3RHet 2034179 2034386 -483121 - PROTOP_A DNA P -798 307 98 5 600 4604 6 0 2 chr3RHet 2034400 2034927 -482580 + PROTOP_A DNA P 580 1105 0 5 600 3590 35 2 0 chr3RHet 2034927 2035350 -482157 + DMCR1A LINE CR1 1336 1759 -2711 5 600 16412 40 26 17 chr3RHet 2035347 2037193 -480314 + DMCR1A LINE CR1 2363 4216 -254 5 600 188 0 74 0 chr3RHet 2037193 2037220 -480287 + (CCTAT)n Simple_repeat Simple_repeat 2 30 0 5 600 16412 40 26 17 chr3RHet 2037220 2037462 -480045 + DMCR1A LINE CR1 4217 4469 -1 5 600 985 136 98 0 chr3RHet 2037532 2037716 -479791 + Gypsy9_I LTR Gypsy 472 673 -4004 5 600 3820 179 67 35 chr3RHet 2037697 2038991 -478516 + Gypsy9_I LTR Gypsy 736 2036 -4252 5 600 30158 30 38 53 chr3RHet 2039189 2043255 -474252 - CIRCE LINE Composite -1376 4980 973 5 600 7325 48 31 27 chr3RHet 2043406 2044370 -473137 - CIRCE LINE Composite -5386 970 3 5 600 684 47 0 0 chr3RHet 2044371 2044456 -473051 - CIRCE LINE Composite 0 6356 6272 5 600 9149 45 2 33 chr3RHet 2044454 2045657 -471850 - CIRCE LINE Composite -211 6145 4981 5 600 11377 22 54 7 chr3RHet 2046014 2047414 -470093 - CIRCE LINE Composite -1376 4980 3515 5 600 1562 252 48 3 chr3RHet 2047411 2047883 -469624 + Gypsy9_I LTR Gypsy 2032 2717 -2561 5 600 3057 17 0 3 chr3RHet 2047905 2048262 -469245 - MDG1_LTR LTR Gypsy 0 442 87 5 600 423 100 0 0 chr3RHet 2048262 2048332 -469175 + (TTA)n Simple_repeat Simple_repeat 3 72 0 5 600 56735 19 8 4 chr3RHet 2048336 2048475 -469032 - MDG1_I LTR Gypsy 0 6596 6454 5 600 180 0 0 0 chr3RHet 2048475 2048495 -469012 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 600 56735 6 6 4 chr3RHet 2048495 2054951 -462556 - MDG1_I LTR Gypsy -143 6453 2 5 600 2318 25 0 4 chr3RHet 2054951 2055229 -462278 - MDG1_LTR LTR Gypsy 0 442 166 5 600 887 269 65 0 chr3RHet 2070308 2070587 -446920 + NOMAD_I LTR Gypsy 2920 3216 -3356 5 600 350 336 28 28 chr3RHet 2070574 2070859 -446648 + NOMAD_I LTR Gypsy 5288 5572 -1000 5 600 296 224 6 66 chr3RHet 2070931 2071098 -446409 + (CAAA)n Simple_repeat Simple_repeat 2 158 0 5 600 592 336 45 49 chr3RHet 2071795 2072283 -445224 + NOMAD_I LTR Gypsy 6077 6562 -10 5 600 555 298 162 18 chr3RHet 2073168 2073445 -444062 - NOMAD_I LTR Gypsy -208 6364 6048 5 600 1292 156 62 0 chr3RHet 2073929 2074153 -443354 - DNAREP1_DM LINE Penelope -26 568 331 5 600 233 155 41 27 chr3RHet 2074168 2074241 -443266 - DNAREP1_DM LINE Penelope -315 279 206 5 600 17326 44 22 25 chr3RHet 2074236 2076453 -441054 + DMCR1A LINE CR1 2106 4315 -155 5 600 42637 5 3 2 chr3RHet 2076453 2081143 -436364 - DOC LINE Jockey 0 4725 32 5 600 1043 82 95 0 chr3RHet 2081168 2081315 -436192 + DMCR1A LINE CR1 4310 4470 0 5 600 383 164 27 0 chr3RHet 2081318 2081391 -436116 - Invader6_I LTR Gypsy -3159 940 866 5 600 417 238 103 14 chr3RHet 2082431 2082576 -434931 + NOMAD_I LTR Gypsy 534 691 -5881 5 600 746 320 0 0 chr3RHet 2082986 2083230 -434277 + NOMAD_I LTR Gypsy 1376 1619 -4953 5 600 2208 319 30 20 chr3RHet 2083422 2084347 -433160 + NOMAD_I LTR Gypsy 4632 5565 -1007 5 600 221 235 32 48 chr3RHet 2084423 2084548 -432959 + A-rich Low_complexity Low_complexity 3 125 0 5 600 263 291 0 11 chr3RHet 2085026 2085113 -432394 + NOMAD_I LTR Gypsy 5941 6026 -546 5 600 1702 32 233 19 chr3RHet 2085614 2085858 -431649 + DMRT1A LINE R1 1 297 -4886 5 600 1017 16 179 11 chr3RHet 2085858 2086042 -431465 - ACCORD2_LTR LTR Gypsy 0 215 1 5 600 720 130 52 0 chr3RHet 2086042 2086155 -431352 - ACCORD2_I LTR Gypsy -11 7201 7083 5 600 499 180 10 124 chr3RHet 2086139 2086348 -431159 - ACCORD2_I LTR Gypsy -5521 1691 1507 5 600 11703 16 15 11 chr3RHet 2086409 2087770 -429737 - ACCORD2_I LTR Gypsy -5845 1367 1 5 600 1872 9 0 31 chr3RHet 2087770 2087992 -429515 - ACCORD2_LTR LTR Gypsy 0 215 1 5 600 6487 35 3 1 chr3RHet 2087992 2088766 -428741 + DMRT1A LINE R1 294 1068 -4115 5 600 13140 25 4 11 chr3RHet 2088768 2090297 -427210 + DMRT1A LINE R1 1311 2828 -2355 5 600 2372 29 0 0 chr3RHet 2090295 2090570 -426937 + DMRT1A LINE R1 2940 3214 -1969 5 600 5476 41 23 8 chr3RHet 2090567 2091230 -426277 + DMRT1A LINE R1 3429 4101 -1082 5 600 4097 35 8 0 chr3RHet 2091233 2091714 -425793 + DMRT1A LINE R1 4691 5175 -8 5 600 342 335 23 23 chr3RHet 2091727 2091944 -425563 + NOMAD_I LTR Gypsy 6259 6475 -97 5 600 310 324 42 33 chr3RHet 2093003 2093249 -424258 + QUASIMODO_I LTR Gypsy 379 615 -5348 5 600 766 285 48 56 chr3RHet 2093493 2093976 -423531 + QUASIMODO_I LTR Gypsy 1200 1678 -4382 5 600 1159 164 0 30 chr3RHet 2093985 2094202 -423305 + Gypsy8_LTR LTR Gypsy 1 210 -94 5 600 1312 139 0 37 chr3RHet 2094202 2094448 -423059 + Gypsy8_I LTR Gypsy 1 237 -4110 5 600 819 291 45 33 chr3RHet 2095062 2095421 -422086 + Gypsy8_I LTR Gypsy 413 775 -5878 5 600 4554 70 89 20 chr3RHet 2095497 2096206 -421301 + Gypsy8_I LTR Gypsy 230 987 -3360 5 600 1791 303 13 3 chr3RHet 2096182 2096797 -420710 + Gypsy8_I LTR Gypsy 1983 2603 -4050 5 9 6604 176 80 103 chr3RHet 2096815 2099270 -418237 + Gypsy8_I LTR Gypsy 1035 3388 -3265 5 601 351 250 0 0 chr3RHet 2099299 2099447 -418060 + (CCG)n Simple_repeat Simple_repeat 1 148 0 5 601 248 264 11 11 chr3RHet 2099463 2099551 -417956 + (CCG)n Simple_repeat Simple_repeat 2 89 0 5 601 425 121 0 168 chr3RHet 2099793 2099912 -417595 + Gypsy8_I LTR Gypsy 3321 3419 -928 5 601 679 97 263 70 chr3RHet 2100034 2100190 -417317 + Gypsy8_I LTR Gypsy 3407 3592 -755 5 601 3891 68 3 100 chr3RHet 2100197 2100836 -416671 + Gypsy8_I LTR Gypsy 3771 4347 0 5 601 1711 112 1 28 chr3RHet 2100837 2101217 -416290 + Gypsy8_LTR LTR Gypsy 1 296 -8 5 601 1122 110 129 5 chr3RHet 2101215 2101416 -416091 + Gypsy8_I LTR Gypsy 11 236 -4111 5 601 715 231 57 49 chr3RHet 2102406 2102652 -414855 + IDEFIX_I LTR Gypsy 1432 1679 -3949 5 601 238 107 18 18 chr3RHet 2102661 2102718 -414789 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 601 1587 286 24 16 chr3RHet 2102718 2103462 -414045 + QUASIMODO_I LTR Gypsy 5311 6060 0 5 601 1656 226 3 3 chr3RHet 2103637 2103975 -413532 - TV1I LTR Gypsy -3533 2430 2093 5 601 765 240 42 34 chr3RHet 2103991 2104254 -413253 - IDEFIX_I LTR Gypsy -3932 1696 1432 5 601 284 294 42 47 chr3RHet 2104376 2104569 -412938 - QUASIMODO_I LTR Gypsy -4472 1588 1397 5 601 299 322 46 37 chr3RHet 2104953 2105199 -412308 - QUASIMODO_I LTR Gypsy -5348 615 379 5 601 193 75 24 24 chr3RHet 2106090 2106131 -411376 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 601 896 202 62 114 chr3RHet 2106131 2106517 -410990 + ROVER-LTR_DM LTR Gypsy 2 367 0 5 601 4587 242 84 74 chr3RHet 2106517 2108871 -408636 + ROVER-I_DM LTR Gypsy 1 2642 -3942 5 601 847 179 0 0 chr3RHet 2108874 2109019 -408488 + ROVER-I_DM LTR Gypsy 3045 3189 -3395 5 601 1594 26 198 0 chr3RHet 2109021 2109243 -408264 - Invader2_LTR LTR Gypsy 0 266 1 5 601 982 16 24 0 chr3RHet 2109243 2109368 -408139 - Invader2_I LTR Gypsy 0 4592 4465 5 601 28773 11 3 0 chr3RHet 2109370 2113675 -403832 - Invader2_I LTR Gypsy -268 4324 1 5 601 2259 23 8 0 chr3RHet 2113675 2113939 -403568 - Invader2_LTR LTR Gypsy 0 266 1 5 601 11538 203 9 6 chr3RHet 2113944 2117394 -400113 + ROVER-I_DM LTR Gypsy 2916 6584 0 5 601 799 208 111 92 chr3RHet 2117394 2117754 -399753 + ROVER-LTR_DM LTR Gypsy 1 367 0 5 601 676 169 14 0 chr3RHet 2118070 2118212 -399295 - DM412 LTR Gypsy -846 6051 5908 5 601 12918 42 28 1 chr3RHet 2118209 2119826 -397681 - DMCR1A LINE CR1 0 4470 2811 5 601 444 248 120 16 chr3RHet 2119828 2120040 -397467 - DM412 LTR Gypsy -986 5911 5675 5 601 487 17 0 0 chr3RHet 2120040 2120098 -397409 + Gypsy11_LTR LTR Gypsy 1 58 -394 5 601 3675 34 0 5 chr3RHet 2120098 2120541 -396966 + Gypsy11_LTR LTR Gypsy 2 442 -10 5 601 1217 34 0 0 chr3RHet 2120551 2120699 -396808 + Gypsy11_I LTR Gypsy 1 148 -3376 5 601 9233 22 42 0 chr3RHet 2120699 2120954 -396553 + Gypsy11_I LTR Gypsy 258 522 -3002 5 601 216 135 0 0 chr3RHet 2120954 2120991 -396516 + (CAG)n Simple_repeat Simple_repeat 1 37 0 5 601 9233 22 42 0 chr3RHet 2120991 2121893 -395614 + Gypsy11_I LTR Gypsy 523 1462 -2062 5 601 635 38 0 0 chr3RHet 2121897 2121977 -395530 + Baggins1 LINE LOA 4354 4433 -1020 5 601 5909 43 60 0 chr3RHet 2121981 2122727 -394780 + Baggins1 LINE LOA 4663 5453 0 5 601 17100 6 22 0 chr3RHet 2122731 2124496 -393011 + Gypsy11_I LTR Gypsy 1455 3254 -270 5 601 306 0 0 0 chr3RHet 2124496 2124530 -392977 + (TAG)n Simple_repeat Simple_repeat 2 35 0 5 601 17100 6 22 0 chr3RHet 2124530 2124789 -392718 + Gypsy11_I LTR Gypsy 3255 3523 -1 5 601 3195 50 60 0 chr3RHet 2124789 2125206 -392301 + Gypsy11_LTR LTR Gypsy 1 442 -10 5 601 23 68 0 0 chr3RHet 2125208 2125252 -392255 + AT_rich Low_complexity Low_complexity 1 44 0 5 601 863 182 22 0 chr3RHet 2125268 2125449 -392058 - TABOR_I LTR Gypsy -1463 4873 4689 5 601 288 95 0 0 chr3RHet 2125659 2125701 -391806 - DNAREP1_DM LINE Penelope 0 594 553 5 601 247 0 0 0 chr3RHet 2126992 2127019 -390488 + DNAREP1_DM LINE Penelope 567 593 -1 5 601 21 36 0 0 chr3RHet 2127589 2127617 -389890 + AT_rich Low_complexity Low_complexity 1 28 0 5 601 775 129 214 36 chr3RHet 2128508 2128706 -388801 - DNAREP1_DM LINE Penelope -25 569 380 5 601 615 174 0 0 chr3RHet 2128708 2128817 -388690 + PROTOP DNA P 78 186 -4294 5 601 39 0 0 0 chr3RHet 2128833 2128872 -388635 + AT_rich Low_complexity Low_complexity 1 39 0 5 601 31 82 0 0 chr3RHet 2129364 2129437 -388070 + AT_rich Low_complexity Low_complexity 1 73 0 5 601 25 0 0 0 chr3RHet 2130642 2130667 -386840 + AT_rich Low_complexity Low_complexity 1 25 0 5 601 1153 337 46 41 chr3RHet 2131395 2132033 -385474 - Gypsy4_I LTR Gypsy -2298 3562 2798 5 601 1531 28 24 0 chr3RHet 2132033 2132246 -385261 - TLD2 Unknown Unknown 0 218 1 5 601 1153 337 46 41 chr3RHet 2132246 2132697 -384810 - Gypsy4_I LTR Gypsy -2298 2797 2255 5 601 22 35 0 0 chr3RHet 2133301 2133330 -384177 + AT_rich Low_complexity Low_complexity 1 29 0 5 601 340 336 30 52 chr3RHet 2133587 2133857 -383650 - Gypsy6_I LTR Gypsy -5228 1784 1521 5 601 217 214 59 12 chr3RHet 2134407 2134492 -383015 + T-rich Low_complexity Low_complexity 2 90 0 5 601 36 0 0 0 chr3RHet 2134758 2134794 -382713 + AT_rich Low_complexity Low_complexity 1 36 0 5 601 1763 107 204 0 chr3RHet 2135630 2135958 -381549 + Gypsy12A_LTR LTR Gypsy 1 395 -1885 5 601 825 65 224 5 chr3RHet 2136043 2136257 -381250 + Gypsy12A_LTR LTR Gypsy 2013 2273 -7 5 601 903 27 0 0 chr3RHet 2136617 2136727 -380780 + (TC)n Simple_repeat Simple_repeat 2 111 0 5 601 336 286 34 0 chr3RHet 2137201 2137320 -380187 + DIVER2_I LTR Pao 4021 4143 -4 5 601 21 0 0 0 chr3RHet 2137504 2137525 -379982 + AT_rich Low_complexity Low_complexity 1 21 0 5 601 22397 36 47 13 chr3RHet 2137588 2140535 -376972 + DMCR1A LINE CR1 4 3050 -1420 5 601 4824 110 180 6 chr3RHet 2140544 2141789 -375718 - DOC LINE Jockey -1554 3171 1710 5 601 3544 138 128 62 chr3RHet 2141968 2142116 -375391 + Gypsy12A_LTR LTR Gypsy 719 882 -1398 5 601 286 0 67 22 chr3RHet 2142116 2142161 -375346 + (TTATA)n Simple_repeat Simple_repeat 5 51 0 5 601 3544 138 128 62 chr3RHet 2142161 2142978 -374529 + Gypsy12A_LTR LTR Gypsy 883 1748 -532 5 601 1587 35 5 0 chr3RHet 2142939 2143138 -374369 - DOC3_DM LINE Jockey -1 4739 4540 5 601 14703 37 56 1 chr3RHet 2143136 2144966 -372541 - DOC3_DM LINE Jockey -2043 2697 767 5 601 3668 103 140 5 chr3RHet 2145018 2145993 -371514 - DOC LINE Jockey -1909 2816 1710 5 601 3554 139 129 60 chr3RHet 2146172 2146320 -371187 + Gypsy12A_LTR LTR Gypsy 719 882 -1398 5 601 286 0 67 22 chr3RHet 2146320 2146365 -371142 + (TTATA)n Simple_repeat Simple_repeat 5 51 0 5 601 3554 139 129 60 chr3RHet 2146365 2147180 -370327 + Gypsy12A_LTR LTR Gypsy 883 1748 -532 5 601 1587 35 5 0 chr3RHet 2147141 2147340 -370167 - DOC3_DM LINE Jockey -1 4739 4540 5 601 14703 37 56 1 chr3RHet 2147338 2149168 -368339 - DOC3_DM LINE Jockey -2043 2697 767 5 601 2063 62 14 0 chr3RHet 2149164 2149435 -368072 - DOC3_DM LINE Jockey -4146 594 320 5 601 2410 121 96 45 chr3RHet 2149435 2149884 -367623 - ZAM_LTR LTR Gypsy 0 472 1 5 601 2306 72 0 28 chr3RHet 2149884 2150210 -367297 - DOC3_DM LINE Jockey -4423 317 1 5 601 2858 130 50 54 chr3RHet 2150220 2150796 -366711 + Gypsy12A_LTR LTR Gypsy 1707 2280 0 5 601 42 20 0 0 chr3RHet 2150834 2150883 -366624 + AT_rich Low_complexity Low_complexity 1 49 0 5 601 1509 111 72 79 chr3RHet 2150883 2151187 -366320 - DNAREP1_DM LINE Penelope -37 557 256 5 601 269 164 18 0 chr3RHet 2151185 2151240 -366267 - I_DM LINE I -3570 2661 2606 5 601 2143 15 18 14 chr3RHet 2151268 2151545 -365962 + DMCR1A LINE CR1 4 281 -4189 5 601 47 0 0 0 chr3RHet 2151553 2151600 -365907 + AT_rich Low_complexity Low_complexity 1 47 0 5 601 18786 36 21 1 chr3RHet 2152092 2154363 -363144 + DMCR1A LINE CR1 270 2586 -1884 5 601 6019 35 162 5 chr3RHet 2154344 2155177 -362330 + DMCR1A LINE CR1 2917 3880 -590 5 601 2987 193 98 2 chr3RHet 2155180 2155939 -361568 - Gypsy12_I LTR Gypsy -1117 4429 3526 5 601 973 180 168 9 chr3RHet 2155966 2156180 -361327 - Gypsy12_I LTR Gypsy -2283 3263 3016 5 601 559 241 68 0 chr3RHet 2156197 2156330 -361177 - Gypsy12_I LTR Gypsy -2604 2942 2801 5 601 994 267 81 6 chr3RHet 2156360 2156695 -360812 - Gypsy12_I LTR Gypsy -2931 2615 2256 5 601 904 197 5 56 chr3RHet 2156723 2156938 -360569 - Gypsy12_I LTR Gypsy -3401 2145 1942 5 601 2943 224 48 7 chr3RHet 2156960 2157653 -359854 - Gypsy12_I LTR Gypsy -4043 1503 783 5 601 592 48 167 0 chr3RHet 2157650 2157734 -359773 + DNAREP1_DM LINE Penelope 460 557 -37 5 601 274 190 49 25 chr3RHet 2157737 2157818 -359689 + DMCR1A LINE CR1 1199 1281 -3189 5 601 2125 110 81 0 chr3RHet 2157818 2158153 -359354 - Gypsy12A_LTR LTR Gypsy 0 2280 1919 5 601 23 78 0 0 chr3RHet 2158153 2158204 -359303 + AT_rich Low_complexity Low_complexity 1 51 0 5 601 658 234 152 40 chr3RHet 2159012 2159288 -358219 - DNAREP1_DM LINE Penelope -106 488 182 5 601 590 163 27 140 chr3RHet 2159351 2159666 -357841 + DNAREP1_DM LINE Penelope 121 328 -266 5 601 252 0 0 0 chr3RHet 2159748 2159776 -357731 + (TTA)n Simple_repeat Simple_repeat 2 29 0 5 601 332 141 202 13 chr3RHet 2159776 2159855 -357652 + DNAREP1_DM LINE Penelope 213 306 -288 5 601 34 24 0 0 chr3RHet 2159911 2159952 -357555 + AT_rich Low_complexity Low_complexity 1 41 0 5 601 368 0 0 0 chr3RHet 2161073 2161115 -356392 + PROTOP_B DNA P 1 42 -1111 5 601 3665 41 43 4 chr3RHet 2161115 2161870 -355637 + PROTOP DNA P 3650 4102 -378 5 601 1659 164 78 7 chr3RHet 2161976 2162282 -355225 + DMRT1B LINE R1 709 1036 -4147 5 601 429 123 0 0 chr3RHet 2162273 2162338 -355169 + DMRT1B LINE R1 1373 1437 -3746 5 601 750 23 0 0 chr3RHet 2162336 2162423 -355084 + IVK_DM LINE I 5277 5363 -39 5 601 263 330 24 89 chr3RHet 2162525 2162771 -354736 + ACCORD2_I LTR Gypsy 526 755 -6457 5 601 5890 3 0 0 chr3RHet 2162806 2163464 -354043 - QUASIMODO_LTR LTR Gypsy 0 658 1 5 601 51 31 0 0 chr3RHet 2163464 2163529 -353978 + AT_rich Low_complexity Low_complexity 1 65 0 5 601 360 91 0 0 chr3RHet 2163849 2163904 -353603 + PROTOP_B DNA P 219 273 -880 5 601 732 149 337 11 chr3RHet 2163976 2164160 -353347 + ROO_I LTR Pao 5242 5485 -2771 5 601 572 194 97 0 chr3RHet 2164150 2164305 -353202 + ROO_I LTR Pao 6612 6781 -1475 5 601 399 174 52 60 chr3RHet 2164497 2164613 -352894 - Copia_I LTR Copia -74 4519 4405 5 601 1083 248 93 41 chr3RHet 2164659 2165143 -352364 - Copia_I LTR Copia -266 4327 3819 5 601 480 263 78 35 chr3RHet 2165154 2165386 -352121 - Copia_I LTR Copia -866 3727 3486 5 601 1048 81 148 5 chr3RHet 2165452 2165675 -351832 - TRANSIB3 DNA Transib -3 2880 2626 5 601 564 15 0 0 chr3RHet 2165689 2165757 -351750 - TRANSIB3 DNA Transib -424 2459 2392 5 601 2806 36 137 16 chr3RHet 2165766 2166226 -351281 - TRANSIB3 DNA Transib -1577 1306 791 5 601 22994 6 41 7 chr3RHet 2166223 2169074 -348433 - QUASIMODO_I LTR Gypsy -3113 2947 1 5 601 5580 5 3 0 chr3RHet 2169074 2169730 -347777 - QUASIMODO_LTR LTR Gypsy 0 658 1 5 601 203 164 32 16 chr3RHet 2169730 2169792 -347715 + (TA)n Simple_repeat Simple_repeat 1 63 0 5 601 345 91 0 0 chr3RHet 2170113 2170168 -347339 + PROTOP_B DNA P 219 273 -880 5 601 692 149 337 11 chr3RHet 2170240 2170424 -347083 + ROO_I LTR Pao 5242 5485 -2771 5 601 523 194 97 0 chr3RHet 2170414 2170569 -346938 + ROO_I LTR Pao 6612 6781 -1475 5 601 361 184 57 19 chr3RHet 2170772 2170877 -346630 - Copia_I LTR Copia -80 4513 4405 5 601 1002 252 91 39 chr3RHet 2170923 2171407 -346100 - Copia_I LTR Copia -266 4327 3819 5 601 410 268 78 35 chr3RHet 2171418 2171650 -345857 - Copia_I LTR Copia -866 3727 3486 5 601 1005 76 143 5 chr3RHet 2171716 2171940 -345567 - TRANSIB3 DNA Transib -3 2880 2626 5 601 522 29 0 0 chr3RHet 2171954 2172022 -345485 - TRANSIB3 DNA Transib -424 2459 2392 5 601 5412 37 105 10 chr3RHet 2172031 2172862 -344645 - TRANSIB3 DNA Transib -1577 1306 397 5 601 5198 120 97 2 chr3RHet 2173070 2174174 -343333 + DMRT1B LINE R1 2 1210 -3973 5 601 4924 3 0 0 chr3RHet 2174171 2174747 -342760 - QUASIMODO_LTR LTR Gypsy -82 576 1 5 601 51 31 0 0 chr3RHet 2174747 2174812 -342695 + AT_rich Low_complexity Low_complexity 1 65 0 5 601 345 91 0 0 chr3RHet 2175132 2175187 -342320 + PROTOP_B DNA P 219 273 -880 5 601 692 149 337 11 chr3RHet 2175259 2175443 -342064 + ROO_I LTR Pao 5242 5485 -2771 5 601 523 194 97 0 chr3RHet 2175433 2175588 -341919 + ROO_I LTR Pao 6612 6781 -1475 5 601 1142 248 131 36 chr3RHet 2175791 2176426 -341081 - Copia_I LTR Copia -80 4513 3819 5 601 410 268 78 35 chr3RHet 2176437 2176669 -340838 - Copia_I LTR Copia -866 3727 3486 5 601 999 81 143 5 chr3RHet 2176735 2176959 -340548 - TRANSIB3 DNA Transib -3 2880 2626 5 601 522 29 0 0 chr3RHet 2176973 2177041 -340466 - TRANSIB3 DNA Transib -424 2459 2392 5 601 5398 38 105 12 chr3RHet 2177050 2177883 -339624 - TRANSIB3 DNA Transib -1577 1306 397 5 601 9725 132 53 1 chr3RHet 2178091 2180590 -336917 + DMRT1B LINE R1 2 2631 -2552 5 601 1172 103 6 0 chr3RHet 2180572 2180746 -336761 + DMRT1B LINE R1 3602 3776 -1407 5 601 1235 132 159 0 chr3RHet 2180745 2180972 -336535 + DMRT1B LINE R1 3966 4228 -955 5 601 2802 110 139 6 chr3RHet 2180986 2181482 -336025 + DMRT1B LINE R1 4621 5182 -1 5 601 2098 73 0 0 chr3RHet 2181489 2181789 -335718 - TRANSIB3 DNA Transib -2475 408 109 5 601 411 240 48 48 chr3RHet 2181798 2182004 -335503 - Copia_I LTR Copia -1589 3004 2799 5 601 6260 172 47 64 chr3RHet 2182119 2183779 -333728 - Gypsy12_LTR LTR Gypsy 0 2336 705 5 601 1984 174 7 19 chr3RHet 2183781 2184196 -333311 - Gypsy12_LTR LTR Gypsy -1926 410 1 5 601 334 280 17 17 chr3RHet 2184365 2184528 -332979 - Copia_I LTR Copia -2315 2278 2116 5 601 6500 72 61 62 chr3RHet 2184528 2185683 -331824 + PROTOP_B DNA P 1 1153 0 5 601 424 0 0 0 chr3RHet 2185683 2185732 -331775 + PROTOP_B DNA P 1105 1153 0 5 601 280 291 51 82 chr3RHet 2185937 2186229 -331278 - Copia_I LTR Copia -3131 1462 1180 5 601 634 293 86 42 chr3RHet 2186634 2187207 -330300 - Copia_I LTR Copia -3845 748 151 5 601 238 88 0 0 chr3RHet 2187460 2187494 -330013 - Invader1_LTR LTR Gypsy -2 421 388 5 601 1237 147 33 41 chr3RHet 2187494 2187764 -329743 - Invader1_LTR LTR Gypsy -155 268 1 5 601 450 0 0 0 chr3RHet 2187821 2187876 -329631 - S2_DM DNA Tc1 0 1735 1681 5 601 3060 42 40 0 chr3RHet 2187896 2188300 -329207 - Gypsy6A_LTR LTR Gypsy 0 420 1 5 601 2610 307 62 13 chr3RHet 2188302 2189659 -327848 - Gypsy6_I LTR Gypsy 0 7012 4754 5 601 1343 272 37 5 chr3RHet 2189651 2190053 -327454 - Gypsy6_I LTR Gypsy -1777 5235 4821 5 601 266 188 0 0 chr3RHet 2190064 2190122 -327385 - Gypsy6_I LTR Gypsy -2289 4723 4678 5 601 3586 39 207 13 chr3RHet 2190129 2190815 -326692 + DMCR1A LINE CR1 1 819 -3651 5 601 7464 36 82 0 chr3RHet 2190823 2192234 -325273 + DMCR1A LINE CR1 1060 2586 -1884 5 601 5419 29 19 4 chr3RHet 2192215 2192899 -324608 + DMCR1A LINE CR1 2917 3610 -860 5 601 8510 29 16 3 chr3RHet 2192899 2193990 -323517 - PROTOP_A DNA P 0 1105 1 5 601 6709 27 27 2 chr3RHet 2193990 2194836 -322671 + DMCR1A LINE CR1 3604 4470 0 5 601 992 214 32 0 chr3RHet 2194846 2195066 -322441 - Gypsy6_I LTR Gypsy -2334 4678 4452 5 601 1772 251 84 10 chr3RHet 2195067 2195589 -321918 - Gypsy6_I LTR Gypsy -2703 4309 3749 5 601 4896 291 38 18 chr3RHet 2195591 2197400 -320107 - Gypsy6_I LTR Gypsy -3515 3497 1653 5 601 371 302 116 65 chr3RHet 2197439 2197733 -319774 - Gypsy2_I LTR Gypsy -4840 1295 987 5 601 22 94 0 0 chr3RHet 2197890 2197954 -319553 + AT_rich Low_complexity Low_complexity 1 64 0 5 601 3032 54 29 2 chr3RHet 2198163 2198572 -318935 - Gypsy6A_LTR LTR Gypsy 0 420 1 5 601 35 24 0 0 chr3RHet 2199092 2199134 -318373 + AT_rich Low_complexity Low_complexity 1 42 0 5 601 1210 244 60 38 chr3RHet 2199220 2199718 -317789 - Copia_I LTR Copia -266 4327 3819 5 601 277 265 93 26 chr3RHet 2199729 2199880 -317627 - Copia_I LTR Copia -866 3727 3567 5 601 32 0 0 0 chr3RHet 2199897 2199929 -317578 + AT_rich Low_complexity Low_complexity 1 32 0 5 601 1057 79 100 5 chr3RHet 2199974 2200164 -317343 - TRANSIB3 DNA Transib -171 2712 2505 5 601 2448 47 110 27 chr3RHet 2200231 2200596 -316911 + Mariner2_DM DNA Tc1 5 399 -513 5 601 1555 246 58 0 chr3RHet 2201427 2201878 -315629 + MAX_I LTR Pao 1490 1966 -5948 5 601 1628 240 104 64 chr3RHet 2201879 2202735 -314772 + MAX_I LTR Pao 2249 3138 -4776 5 601 4341 169 54 46 chr3RHet 2202741 2203726 -313781 + MAX_I LTR Pao 3447 4439 -3475 5 601 838 159 99 0 chr3RHet 2203717 2203899 -313608 + MAX_I LTR Pao 5093 5292 -2622 5 601 882 157 346 32 chr3RHet 2204128 2204397 -313110 - DNAREP1_DM LINE Penelope -72 522 170 5 601 22 80 0 0 chr3RHet 2204739 2204789 -312718 + AT_rich Low_complexity Low_complexity 1 50 0 5 601 23 33 0 0 chr3RHet 2204948 2204978 -312529 + AT_rich Low_complexity Low_complexity 1 30 0 5 601 22 0 0 0 chr3RHet 2205531 2205553 -311954 + AT_rich Low_complexity Low_complexity 1 22 0 5 601 661 76 78 78 chr3RHet 2206360 2206488 -311019 - DNAREP1_DM LINE Penelope 0 594 467 5 601 718 174 161 40 chr3RHet 2206503 2206862 -310645 - DNAREP1_DM LINE Penelope -266 328 1 5 601 353 90 209 0 chr3RHet 2207004 2207071 -310436 + DNAREP1_DM LINE Penelope 467 547 -47 5 601 480 156 78 47 chr3RHet 2207135 2207263 -310244 - Gypsy6A_LTR LTR Gypsy -41 379 248 5 601 34 24 0 0 chr3RHet 2207711 2207752 -309755 + AT_rich Low_complexity Low_complexity 1 41 0 5 601 2506 279 48 33 chr3RHet 2207838 2209154 -308353 - Copia_I LTR Copia -266 4327 2992 5 601 1147 273 56 47 chr3RHet 2209383 2210083 -307424 - Copia_I LTR Copia -2298 2295 1590 5 601 27 0 0 0 chr3RHet 2210098 2210125 -307382 + AT_rich Low_complexity Low_complexity 1 27 0 5 601 4456 84 8 28 chr3RHet 2215258 2215970 -301537 - CIRCE LINE Composite -1376 4980 4283 5 601 6976 65 55 26 chr3RHet 2215971 2217020 -300487 - CIRCE LINE Composite -2316 4040 2961 5 601 874 41 0 89 chr3RHet 2217022 2217157 -300350 - CIRCE LINE Composite -3521 2835 2713 5 601 7923 60 27 122 chr3RHet 2217156 2218572 -298935 - CIRCE LINE Composite -4102 2254 973 5 601 6576 62 47 28 chr3RHet 2218699 2219651 -297856 - CIRCE LINE Composite -5386 970 1 5 601 18790 90 77 82 chr3RHet 2219678 2225158 -292349 - CIRCE LINE Composite -79 6277 973 5 601 6831 60 30 28 chr3RHet 2225300 2226268 -291239 - CIRCE LINE Composite -5386 970 1 5 601 6601 35 28 0 chr3RHet 2226295 2227122 -290385 - CIRCE LINE Composite -79 6277 5428 5 601 2508 81 67 35 chr3RHet 2227202 2227635 -289872 - CIRCE LINE Composite -929 5427 4981 5 75 4489 83 7 23 chr3RHet 2227989 2228692 -288815 - CIRCE LINE Composite -1376 4980 4289 5 602 4175 77 78 38 chr3RHet 2228694 2229384 -288123 - CIRCE LINE Composite -2317 4039 3322 5 602 809 102 70 35 chr3RHet 2259384 2259527 -257980 - DOC LINE Jockey -2868 1857 1710 5 602 3289 137 128 62 chr3RHet 2259706 2259854 -257653 + Gypsy12A_LTR LTR Gypsy 719 882 -1398 5 602 286 0 67 22 chr3RHet 2259854 2259899 -257608 + (TTATA)n Simple_repeat Simple_repeat 5 51 0 5 602 3289 137 128 62 chr3RHet 2259899 2260716 -256791 + Gypsy12A_LTR LTR Gypsy 883 1748 -532 5 602 1516 35 5 0 chr3RHet 2260677 2260876 -256631 - DOC3_DM LINE Jockey -1 4739 4540 5 602 4157 38 30 0 chr3RHet 2260874 2261404 -256103 - DOC3_DM LINE Jockey -2043 2697 2152 5 602 2790 36 181 0 chr3RHet 2261439 2261943 -255564 + DMCR1A LINE CR1 1992 2586 -1884 5 602 5458 36 7 4 chr3RHet 2261924 2262616 -254891 + DMCR1A LINE CR1 2917 3610 -860 5 602 8679 28 12 0 chr3RHet 2262616 2263708 -253799 - PROTOP_A DNA P 0 1105 1 5 602 6709 27 27 2 chr3RHet 2263708 2264554 -252953 + DMCR1A LINE CR1 3604 4470 0 5 602 992 214 32 0 chr3RHet 2264564 2264784 -252723 - Gypsy6_I LTR Gypsy -2334 4678 4452 5 602 2938 254 72 10 chr3RHet 2264785 2265671 -251836 - Gypsy6_I LTR Gypsy -2703 4309 3369 5 602 2955 278 26 2 chr3RHet 2265676 2266569 -250938 - Gypsy6_I LTR Gypsy -3759 3253 2340 5 602 7225 38 3 0 chr3RHet 2270122 2271024 -246483 - DMCR1A LINE CR1 -1496 2974 2070 5 602 21 71 0 0 chr3RHet 2271044 2271086 -246421 + AT_rich Low_complexity Low_complexity 1 42 0 5 602 399 342 142 7 chr3RHet 2271232 2271541 -245966 + Gypsy6_I LTR Gypsy 1000 1350 -5662 5 602 6278 285 49 23 chr3RHet 2271576 2273849 -243658 + Gypsy6_I LTR Gypsy 1653 3983 -3029 5 602 26 64 0 0 chr3RHet 2274630 2274677 -242830 + AT_rich Low_complexity Low_complexity 1 47 0 5 602 5327 334 23 26 chr3RHet 2274823 2278961 -238546 - GTWIN_I LTR Gypsy -1534 4887 1202 5 602 2897 233 40 5 chr3RHet 2280360 2281007 -236500 + Gypsy6_I LTR Gypsy 3993 4662 -2350 5 602 299 263 126 0 chr3RHet 2281001 2281096 -236411 + Gypsy3_I LTR Gypsy 3991 4097 -2080 5 602 1376 228 20 0 chr3RHet 2281095 2281392 -236115 - Gypsy4_I LTR Gypsy -3499 2789 2487 5 602 9739 15 7 0 chr3RHet 2281392 2282489 -235018 + PROTOP_A DNA P 1 1105 0 5 602 2099 262 3 1 chr3RHet 2282489 2283039 -234468 - Gypsy4_I LTR Gypsy -2571 2707 2004 5 602 2109 301 25 18 chr3RHet 2283221 2284053 -233454 - Gypsy4_I LTR Gypsy -4895 1612 576 5 602 437 67 0 0 chr3RHet 2284349 2284409 -233098 - IDEFIX_LTR LTR Gypsy -528 66 7 5 602 29 0 0 0 chr3RHet 2284439 2284468 -233039 + AT_rich Low_complexity Low_complexity 1 29 0 5 602 2411 126 41 29 chr3RHet 2284505 2284923 -232584 - Invader1_LTR LTR Gypsy 0 423 1 5 602 976 128 164 24 chr3RHet 2284923 2285210 -232297 + DNAREP1_DM LINE Penelope 267 594 0 5 602 377 242 73 13 chr3RHet 2285079 2285230 -232277 - P_DG DNA P 0 2888 2729 5 602 1065 134 75 0 chr3RHet 2285468 2285655 -231852 - MAX_I LTR Pao -2621 5293 5093 5 602 1812 157 15 12 chr3RHet 2285646 2285974 -231533 - MAX_I LTR Pao -3475 4439 4111 5 602 1982 114 97 21 chr3RHet 2286001 2286600 -230907 - DOC4_DM LINE Jockey -10 2781 2260 5 602 746 254 96 27 chr3RHet 2286609 2286870 -230637 - DOC LINE Jockey -1278 3447 3162 5 602 3425 47 9 0 chr3RHet 2286911 2287335 -230172 - DMCR1A LINE CR1 0 4470 4043 5 602 1076 231 36 0 chr3RHet 2287334 2287581 -229926 - BURDOCK_I LTR Gypsy -5178 682 427 5 602 22 35 0 0 chr3RHet 2287711 2287740 -229767 + AT_rich Low_complexity Low_complexity 1 29 0 5 602 354 252 111 76 chr3RHet 2287809 2287981 -229526 - DOC LINE Jockey -1477 3248 3071 5 602 306 319 20 20 chr3RHet 2288188 2288335 -229172 - DOC LINE Jockey -2213 2527 2381 5 602 1629 88 26 4 chr3RHet 2288343 2288572 -228935 - DOC4_DM LINE Jockey -944 1847 1614 5 602 9393 62 77 2 chr3RHet 2288568 2289846 -227661 - DOC4_DM LINE Jockey -1437 1354 7 5 602 293 103 0 0 chr3RHet 2289914 2289953 -227554 - MAX_I LTR Pao -3793 4121 4083 5 602 3433 152 38 28 chr3RHet 2289936 2289998 -227509 - MAX_I LTR Pao -3968 3946 3894 5 602 407 95 14 0 chr3RHet 2289998 2290072 -227435 + (TTA)n Simple_repeat Simple_repeat 2 76 0 5 602 3433 152 38 28 chr3RHet 2290072 2290612 -226895 - MAX_I LTR Pao -4021 3893 3338 5 602 1480 173 166 0 chr3RHet 2290617 2290912 -226595 - MAX_I LTR Pao -5632 2282 1939 5 602 4538 101 69 5 chr3RHet 2291375 2292115 -225392 - I_DM LINE I -761 5470 4684 5 602 308 115 19 0 chr3RHet 2292124 2292176 -225331 - I_DM LINE I -2105 4126 4074 5 602 667 219 44 44 chr3RHet 2292181 2292410 -225097 + Gypsy_LTR LTR Gypsy 203 431 -51 5 602 1810 126 23 0 chr3RHet 2292470 2292779 -224728 - I_DM LINE I -2253 3978 3663 5 602 400 152 0 170 chr3RHet 2293098 2293233 -224274 + DMLTR5 LTR Gypsy 66 177 -89 5 602 784 104 104 7 chr3RHet 2293254 2293389 -224118 + HMSBEAGLE_I LTR Gypsy 245 392 -6137 5 602 51 17 0 0 chr3RHet 2293389 2293447 -224060 + AT_rich Low_complexity Low_complexity 1 58 0 5 602 26 50 0 0 chr3RHet 2293495 2293535 -223972 + AT_rich Low_complexity Low_complexity 1 40 0 5 602 4711 102 108 0 chr3RHet 2293617 2294305 -223202 + HMSBEAGLE_I LTR Gypsy 1217 1978 -4551 5 602 3013 199 1 60 chr3RHet 2294306 2294952 -222555 + HMSBEAGLE_I LTR Gypsy 2280 2887 -3642 5 602 6746 155 21 1 chr3RHet 2294989 2296050 -221457 + HMSBEAGLE_I LTR Gypsy 3087 4168 -2361 5 602 1982 104 0 0 chr3RHet 2296051 2296311 -221196 + HMSBEAGLE_I LTR Gypsy 4487 4746 -1783 5 602 6107 28 37 4 chr3RHet 2296311 2297039 -220468 - DMCR1A LINE CR1 0 4470 3719 5 602 856 77 112 7 chr3RHet 2297040 2297183 -220324 + HMSBEAGLE_I LTR Gypsy 4755 4912 -1617 5 602 225 212 63 105 chr3RHet 2297442 2297537 -219970 - TABOR_LTR LTR Gypsy -415 91 1 5 602 1858 332 32 18 chr3RHet 2297537 2299001 -218506 - Copia2_I LTR Copia -810 3352 1719 5 602 336 301 0 0 chr3RHet 2299032 2299145 -218362 - Copia2_I LTR Copia -2447 1715 1603 5 602 445 302 75 70 chr3RHet 2299470 2299775 -217732 - Copia2_I LTR Copia -2968 1194 817 5 602 606 135 10 0 chr3RHet 2300381 2300485 -217022 - I_DM LINE I -2558 3673 3569 5 602 635 131 0 20 chr3RHet 2300487 2300588 -216919 + STALKER4_LTR LTR Gypsy 274 372 -30 5 602 4665 165 98 60 chr3RHet 2300702 2302068 -215439 + STALKER4_I LTR Gypsy 292 1774 -4756 5 602 4817 104 87 15 chr3RHet 2302070 2302864 -214643 + STALKER4_I LTR Gypsy 1883 2733 -3797 5 602 1086 112 0 0 chr3RHet 2302868 2303020 -214487 + STALKER4_I LTR Gypsy 4563 4714 -1816 5 602 8461 72 3 6 chr3RHet 2303018 2304143 -213364 + STALKER4_I LTR Gypsy 4837 5957 -573 5 602 1355 99 38 5 chr3RHet 2304146 2304359 -213148 - FW_DM LINE Jockey -1184 3508 3289 5 602 1910 139 230 5 chr3RHet 2304360 2304743 -212764 - FW_DM LINE Jockey -1797 2895 2427 5 602 1788 139 33 0 chr3RHet 2304744 2305045 -212462 - FW_DM LINE Jockey -2516 2176 1866 5 602 26 0 0 0 chr3RHet 2305718 2305744 -211763 + AT_rich Low_complexity Low_complexity 1 26 0 5 602 6313 71 27 0 chr3RHet 2305748 2306614 -210893 - BS2 LINE Jockey 0 4721 3742 5 602 868 176 0 0 chr3RHet 2306692 2306840 -210667 - BS3_DM LINE Jockey -1595 195 48 5 602 487 239 123 18 chr3RHet 2306839 2307009 -210498 - BS2 LINE Jockey -1818 2903 2716 5 602 754 241 113 0 chr3RHet 2307016 2307219 -210288 - BS2 LINE Jockey -3816 905 680 5 602 423 244 235 0 chr3RHet 2307215 2307334 -210173 - BS2 LINE Jockey -4254 467 321 5 602 366 47 0 0 chr3RHet 2307470 2307513 -209994 + DNAREP1_DM LINE Penelope 405 447 -147 5 602 1620 3 0 0 chr3RHet 2308209 2308526 -208981 + (GAGAA)n Simple_repeat Simple_repeat 1 317 0 5 602 461 229 33 17 chr3RHet 2309552 2309672 -207835 + TOM_I LTR Gypsy 2413 2512 -3600 5 602 457 256 223 12 chr3RHet 2310070 2310442 -207065 + TOM_I LTR Gypsy 2469 3160 -2803 5 602 520 282 32 4 chr3RHet 2310474 2310757 -206750 + IDEFIX_I LTR Gypsy 3518 4033 -2027 5 602 377 285 92 29 chr3RHet 2310807 2311262 -206245 + IDEFIX_I LTR Gypsy 4260 4743 -1220 5 602 1943 140 91 105 chr3RHet 2311310 2312060 -205447 + DNAREP1_DM LINE Penelope 1 488 -106 5 602 2981 126 80 20 chr3RHet 2312076 2312626 -204881 - QUASIMODO_LTR LTR Gypsy -11 647 65 5 602 22031 35 33 1 chr3RHet 2312647 2317395 -200112 - DMRT1B LINE R1 -39 5144 242 5 602 5919 34 25 0 chr3RHet 2317395 2318605 -198902 - PROTOP DNA P 0 1105 1 5 602 24535 30 39 3 chr3RHet 2318605 2321713 -195794 + Copia2_I LTR Copia 940 4162 0 5 602 1257 20 60 0 chr3RHet 2321726 2321875 -195632 + Copia2_LTR_DM LTR Copia 41 198 0 5 602 2112 51 18 0 chr3RHet 2322104 2322380 -195127 - DOC5_DM LINE Jockey 0 4682 4402 5 602 1822 52 66 11 chr3RHet 2322358 2322632 -194875 - DOC5_DM LINE Jockey -196 4486 4198 5 602 15063 62 27 39 chr3RHet 2322674 2324835 -192672 + MDG1_I LTR Gypsy 1 2134 -4462 5 602 922 52 0 7 chr3RHet 2324848 2324983 -192524 - DOC5_DM LINE Jockey -147 4535 4402 5 602 1795 48 69 15 chr3RHet 2324961 2325235 -192272 - DOC5_DM LINE Jockey -196 4486 4198 5 602 7624 96 39 13 chr3RHet 2325277 2326472 -191035 + MDG1_I LTR Gypsy 1 1227 -5369 5 602 7766 49 20 2 chr3RHet 2326457 2327445 -190062 + MDG1_I LTR Gypsy 1129 2134 -4462 5 602 922 52 0 7 chr3RHet 2327458 2327593 -189914 - DOC5_DM LINE Jockey -147 4535 4402 5 602 1996 42 65 14 chr3RHet 2327571 2327863 -189644 - DOC5_DM LINE Jockey -196 4486 4180 5 602 432 56 0 0 chr3RHet 2327858 2327912 -189595 - DOC5_DM LINE Jockey -703 3979 3926 5 602 351 105 0 0 chr3RHet 2327927 2327984 -189523 + (TAA)n Simple_repeat Simple_repeat 3 59 0 5 602 2060 91 74 3 chr3RHet 2327986 2328284 -189223 + MDG1_LTR LTR Gypsy 94 412 -30 5 602 1948 30 52 0 chr3RHet 2328284 2328515 -188992 - DOC5_DM LINE Jockey -752 3930 3688 5 602 6402 37 24 1 chr3RHet 2328515 2329320 -188187 + PROTOP DNA P 1 823 -3657 5 602 5983 18 0 0 chr3RHet 2329315 2329994 -187513 + PROTOP DNA P 3802 4480 0 5 602 2926 36 90 3 chr3RHet 2329994 2330382 -187125 - DOC5_DM LINE Jockey -988 3694 3273 5 602 23068 34 46 10 chr3RHet 2330381 2333166 -184341 - BS LINE Jockey -5 5121 2236 5 602 6499 32 67 4 chr3RHet 2333166 2334005 -183502 - PROTOP DNA P 0 4480 3589 5 602 6506 29 19 1 chr3RHet 2333985 2334776 -182731 - PROTOP DNA P -2878 1602 798 5 602 1999 38 0 8 chr3RHet 2334774 2335016 -182491 - PROTOP DNA P -4212 268 29 5 602 6079 32 107 0 chr3RHet 2335020 2335806 -181701 - BS LINE Jockey -2883 2243 1374 5 602 2470 73 82 60 chr3RHet 2335820 2336273 -181234 - DOC5_DM LINE Jockey -1438 3244 2782 5 602 1919 45 29 4 chr3RHet 2336271 2336517 -180990 - DOC5_DM LINE Jockey -2341 2341 2090 5 602 2722 0 0 0 chr3RHet 2336517 2336815 -180692 - Invader3_LTR LTR Gypsy 0 298 1 5 602 2276 29 129 3 chr3RHet 2336832 2337142 -180365 + DOC2_DM LINE Jockey 6 354 -4439 5 602 4863 24 5 40 chr3RHet 2337135 2337781 -179726 + DOC2_DM LINE Jockey 765 1387 -3406 5 602 6519 11 0 0 chr3RHet 2337779 2338516 -178991 + DOC2_DM LINE Jockey 4055 4791 -2 5 602 11158 44 59 42 chr3RHet 2338527 2340175 -177332 - DOC5_DM LINE Jockey -2587 2095 420 5 602 2232 285 151 35 chr3RHet 2340190 2341593 -175914 + DMRT1A LINE R1 314 1891 -3292 5 602 2277 108 3 0 chr3RHet 2341592 2341915 -175592 + DMRT1A LINE R1 27 350 -4833 5 602 442 145 12 0 chr3RHet 2345253 2345336 -172171 + DMRT1A LINE R1 347 430 -4753 5 602 3492 82 29 0 chr3RHet 2345352 2345842 -171665 + DMRT1A LINE R1 516 1019 -4164 5 602 6089 76 42 6 chr3RHet 2345839 2346925 -170582 + DMRT1A LINE R1 1131 2593 -2590 5 602 3895 33 103 0 chr3RHet 2346916 2347439 -170068 - DOC5_DM LINE Jockey -2629 2053 1477 5 602 3352 74 110 13 chr3RHet 2347451 2347997 -169510 - DOC5_DM LINE Jockey -3557 1125 527 5 602 22 35 0 0 chr3RHet 2348003 2348032 -169475 + AT_rich Low_complexity Low_complexity 1 29 0 5 602 3383 85 139 50 chr3RHet 2348434 2349080 -168427 + PROTOP_B DNA P 1 704 -449 5 602 948 74 162 0 chr3RHet 2349112 2349260 -168247 + PROTOP_B DNA P 982 1153 0 5 602 866 156 6 0 chr3RHet 2349392 2349746 -167761 + (CATTA)n Simple_repeat Simple_repeat 1 355 0 5 602 438 153 0 0 chr3RHet 2349805 2349877 -167630 + DMRT1C LINE R1 6 77 -5366 5 602 2710 54 64 13 chr3RHet 2349872 2350247 -167260 + DMRT1C LINE R1 807 1200 -4243 5 602 6591 65 32 1 chr3RHet 2350247 2351134 -166373 + DMRT1C LINE R1 1720 2633 -2810 5 602 1171 81 111 0 chr3RHet 2351213 2351383 -166124 + DMRT1C LINE R1 3136 3324 -2119 5 602 2802 52 3 19 chr3RHet 2351383 2351754 -165753 + STALKER4_LTR LTR Gypsy 1 365 -37 5 602 2354 164 44 58 chr3RHet 2351869 2352537 -164970 + STALKER4_I LTR Gypsy 291 1036 -5494 5 602 2020 169 13 3 chr3RHet 2352510 2352896 -164611 + STALKER4_I LTR Gypsy 1426 1815 -4715 5 602 5307 114 12 8 chr3RHet 2352886 2353724 -163783 + STALKER4_I LTR Gypsy 2173 3013 -3517 5 602 1889 97 3 0 chr3RHet 2353724 2354033 -163474 - S_DM DNA Tc1 0 1736 1427 5 602 519 125 0 0 chr3RHet 2354032 2354104 -163403 + S_DM DNA Tc1 1168 1239 -497 5 602 523 87 12 12 chr3RHet 2354106 2354188 -163319 + S_DM DNA Tc1 1343 1424 -312 5 602 6095 38 4 0 chr3RHet 2354191 2354933 -162574 - DMCR1A LINE CR1 -66 4404 3660 5 602 235 59 0 56 chr3RHet 2354930 2354966 -162541 - DMCR1A LINE CR1 -1778 2692 2659 5 602 6488 32 70 10 chr3RHet 2354965 2355791 -161716 - DMCR1A LINE CR1 -1919 2551 1676 5 602 559 67 0 0 chr3RHet 2355788 2355863 -161644 - G4_DM LINE Jockey -130 3726 3652 5 602 3455 29 2 0 chr3RHet 2355869 2356279 -161228 - G4_DM LINE Jockey -338 3518 3108 5 602 15174 52 58 16 chr3RHet 2356290 2358560 -158947 - G4_DM LINE Jockey -826 3030 667 5 75 9384 16 4 3 chr3RHet 2358561 2359665 -157842 + PROTOP_A DNA P 1 1105 0 5 603 1087 71 17 56 chr3RHet 2359665 2359844 -157663 - G4_DM LINE Jockey -3184 672 501 5 603 1242 33 0 0 chr3RHet 2359835 2359988 -157519 - G4_DM LINE Jockey -3703 153 1 5 603 36 70 0 0 chr3RHet 2360675 2360746 -156761 + AT_rich Low_complexity Low_complexity 1 71 0 5 603 30 0 0 0 chr3RHet 2361252 2361282 -156225 + AT_rich Low_complexity Low_complexity 1 30 0 5 603 481 0 0 0 chr3RHet 2362804 2362858 -154649 - DIVER2_LTR LTR Pao 0 385 332 5 603 980 339 74 35 chr3RHet 2363136 2363588 -153919 + Gypsy4_I LTR Gypsy 2255 2776 -3084 5 603 1058 116 26 0 chr3RHet 2363588 2363777 -153730 + TLD2 Unknown Unknown 2 195 -23 5 603 980 339 74 35 chr3RHet 2363777 2364401 -153106 + Gypsy4_I LTR Gypsy 2777 3499 -2361 5 603 33 0 0 0 chr3RHet 2365210 2365243 -152264 + AT_rich Low_complexity Low_complexity 1 33 0 5 603 3809 216 142 21 chr3RHet 2365665 2367356 -150151 + DM297_I LTR Gypsy 3244 5209 -958 5 603 1790 272 34 21 chr3RHet 2367399 2368188 -149319 + DM297_I LTR Gypsy 5268 6066 -46 5 603 6590 16 33 1 chr3RHet 2368188 2368984 -148523 + PROTOP_A DNA P 1 821 -284 5 603 4884 16 0 0 chr3RHet 2368982 2369540 -147967 + FW_DM LINE Jockey 1638 2195 -2497 5 603 16047 19 16 19 chr3RHet 2369538 2371479 -146028 + FW_DM LINE Jockey 2758 4692 0 5 603 1968 26 4 0 chr3RHet 2371482 2371712 -145795 + PROTOP_A DNA P 814 1044 -61 5 603 1050 40 0 51 chr3RHet 2371715 2371873 -145634 + G_DM LINE Jockey 4197 4346 0 5 603 582 43 0 0 chr3RHet 2371864 2371934 -145573 + PROTOP_A DNA P 1033 1103 -2 5 603 1475 98 93 15 chr3RHet 2372179 2372447 -145060 - DNAREP1_DM LINE Penelope -305 289 1 5 603 417 57 0 0 chr3RHet 2372444 2372497 -145010 + DM297_LTR LTR Gypsy 340 392 -22 5 603 461 79 69 0 chr3RHet 2372580 2372681 -144826 + (TA)n Simple_repeat Simple_repeat 2 109 0 5 603 6697 37 99 9 chr3RHet 2372684 2373584 -143923 + S2_DM DNA Tc1 26 1006 -729 5 603 3803 41 18 2 chr3RHet 2373580 2374091 -143416 + S2_DM DNA Tc1 1203 1721 -14 5 603 185 0 40 0 chr3RHet 2374092 2374117 -143390 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 5 603 40 0 0 0 chr3RHet 2375036 2375076 -142431 + AT_rich Low_complexity Low_complexity 1 40 0 5 603 440 210 225 0 chr3RHet 2375192 2375330 -142177 - DNAREP1_DM LINE Penelope -150 444 276 5 603 1075 152 284 25 chr3RHet 2375466 2375886 -141621 + DNAREP1_DM LINE Penelope 101 540 -54 5 603 326 155 174 23 chr3RHet 2376247 2376333 -141174 - DNAREP1_DM LINE Penelope -64 530 432 5 603 252 125 0 77 chr3RHet 2376438 2376490 -141017 - DNAREP1_DM LINE Penelope -33 561 514 5 603 300 109 0 42 chr3RHet 2377333 2377381 -140126 - DNAREP1_DM LINE Penelope -150 444 399 5 603 357 236 107 90 chr3RHet 2377395 2377628 -139879 - DNAREP1_DM LINE Penelope -301 293 57 5 603 233 128 216 23 chr3RHet 2378846 2378934 -138573 - DNAREP1_DM LINE Penelope 0 594 490 5 603 445 161 72 41 chr3RHet 2379358 2379455 -138052 - DNAREP1_DM LINE Penelope -143 451 352 5 603 26 0 0 0 chr3RHet 2379518 2379544 -137963 + AT_rich Low_complexity Low_complexity 1 26 0 5 603 22 0 0 0 chr3RHet 2380712 2380734 -136773 + AT_rich Low_complexity Low_complexity 1 22 0 5 603 24 32 0 0 chr3RHet 2381730 2381761 -135746 + AT_rich Low_complexity Low_complexity 1 31 0 5 603 1322 108 33 46 chr3RHet 2382226 2382615 -134892 - DNAREP1_DM LINE Penelope -96 498 1 5 603 1789 146 168 8 chr3RHet 2382617 2382998 -134509 - DNAREP1_DM LINE Penelope 0 594 153 5 603 609 118 0 0 chr3RHet 2383433 2383552 -133955 + (TA)n Simple_repeat Simple_repeat 2 120 0 5 603 894 122 0 0 chr3RHet 2383551 2383915 -133592 + (TTTA)n Simple_repeat Simple_repeat 1 364 0 5 603 894 122 0 0 chr3RHet 2430921 2431285 -86222 + (TTTA)n Simple_repeat Simple_repeat 1 364 0 5 603 3969 81 94 29 chr3RHet 2431304 2432576 -84931 - I_DM LINE I -3129 3102 1748 5 603 2500 21 0 0 chr3RHet 2432576 2432863 -84644 - Gypsy4_LTR LTR Gypsy 0 287 1 5 603 11892 60 3 11 chr3RHet 2432863 2434528 -82979 - I_DM LINE I -4480 1751 100 5 603 249 352 35 35 chr3RHet 2434583 2434783 -82724 - DIVER2_I LTR Pao -3510 637 438 5 603 2036 165 224 16 chr3RHet 2435568 2436331 -81176 - MINOS DNA Tc1 -317 1458 477 5 603 294 211 80 88 chr3RHet 2436329 2436454 -81053 + MINOS DNA Tc1 1319 1442 -333 5 603 1097 182 57 16 chr3RHet 2436487 2436733 -80774 - MINOS DNA Tc1 -1507 268 13 5 603 23 33 0 0 chr3RHet 2436813 2436843 -80664 + AT_rich Low_complexity Low_complexity 1 30 0 5 603 2058 149 113 12 chr3RHet 2436883 2437394 -80113 + DNAREP1_DM LINE Penelope 128 571 -23 5 603 247 88 0 0 chr3RHet 2437569 2437603 -79904 + DNAREP1_DM LINE Penelope 561 594 0 5 603 22 0 0 0 chr3RHet 2437856 2437878 -79629 + AT_rich Low_complexity Low_complexity 1 22 0 5 603 1744 69 122 7 chr3RHet 2438307 2438717 -78790 + DNAREP1_DM LINE Penelope 1 457 -137 5 603 472 268 33 66 chr3RHet 2439134 2439406 -78101 - DNAREP1_DM LINE Penelope -331 263 1 5 603 344 267 8 57 chr3RHet 2439849 2439972 -77535 - DNAREP1_DM LINE Penelope -85 509 393 5 603 324 231 51 0 chr3RHet 2440680 2440758 -76749 + DNAREP1_DM LINE Penelope 32 113 -481 5 603 38 22 0 0 chr3RHet 2440979 2441024 -76483 + AT_rich Low_complexity Low_complexity 1 45 0 5 603 27 0 0 0 chr3RHet 2441056 2441083 -76424 + AT_rich Low_complexity Low_complexity 1 27 0 5 603 573 173 93 7 chr3RHet 2441392 2441532 -75975 + DNAREP1_DM LINE Penelope 116 267 -327 5 603 34 0 0 0 chr3RHet 2441532 2441566 -75941 + AT_rich Low_complexity Low_complexity 1 34 0 5 603 329 154 0 0 chr3RHet 2441566 2441618 -75889 + DNAREP1_DM LINE Penelope 437 488 -106 5 603 483 139 0 0 chr3RHet 2441763 2441842 -75665 + DNAREP1_DM LINE Penelope 1 79 -515 5 603 207 98 48 24 chr3RHet 2441843 2441885 -75622 + A-rich Low_complexity Low_complexity 5 47 0 5 603 1949 151 109 109 chr3RHet 2441959 2442538 -74969 - DNAREP1_DM LINE Penelope -15 579 1 5 603 709 179 35 0 chr3RHet 2442654 2442799 -74708 - IDEFIX_I LTR Gypsy -1975 3653 3504 5 603 23 0 0 0 chr3RHet 2442976 2442999 -74508 + AT_rich Low_complexity Low_complexity 1 23 0 5 603 597 147 138 0 chr3RHet 2443410 2443526 -73981 - DNAREP1_DM LINE Penelope 0 594 463 5 603 328 182 0 0 chr3RHet 2443516 2443571 -73936 - DNAREP1_DM LINE Penelope -539 55 1 5 603 36 40 0 0 chr3RHet 2443571 2443621 -73886 + AT_rich Low_complexity Low_complexity 1 50 0 5 603 323 260 138 13 chr3RHet 2443857 2444009 -73498 + DMCR1A LINE CR1 3499 3669 -801 5 603 245 197 16 0 chr3RHet 2444098 2444157 -73350 - DNAREP1_DM LINE Penelope -270 324 265 5 603 1696 110 172 10 chr3RHet 2444157 2444470 -73037 - DNAREP1_DM LINE Penelope 0 594 231 5 603 547 143 0 0 chr3RHet 2444514 2444598 -72909 - DMCR1A LINE CR1 -593 3877 3794 5 603 543 154 19 9 chr3RHet 2444630 2444735 -72772 - DMCR1A LINE CR1 -1155 3315 3210 5 603 554 188 78 78 chr3RHet 2444820 2444999 -72508 - DNAREP1_DM LINE Penelope -415 179 1 5 603 490 69 468 20 chr3RHet 2448219 2448370 -69137 - DNAREP1_DM LINE Penelope 0 594 377 5 603 2371 4 0 0 chr3RHet 2448858 2449134 -68373 + Copia_LTR LTR Copia 1 276 0 5 603 40835 1 0 0 chr3RHet 2449134 2453728 -63779 + Copia_I LTR Copia 1 4593 0 5 603 2371 4 0 0 chr3RHet 2453728 2454004 -63503 + Copia_LTR LTR Copia 1 276 0 5 603 25 0 0 0 chr3RHet 2454005 2454030 -63477 + AT_rich Low_complexity Low_complexity 1 25 0 5 603 1081 157 130 0 chr3RHet 2454403 2454626 -62881 + DNAREP1_DM LINE Penelope 341 592 -2 5 603 30 0 0 0 chr3RHet 2454720 2454750 -62757 + AT_rich Low_complexity Low_complexity 1 30 0 5 603 180 0 0 0 chr3RHet 2454865 2454885 -62622 + (T)n Simple_repeat Simple_repeat 1 20 0 5 603 545 164 89 16 chr3RHet 2455457 2455581 -61926 - DMCR1A LINE CR1 -1731 2739 2607 5 603 982 119 6 6 chr3RHet 2455705 2455866 -61641 + DNAREP1_DM LINE Penelope 172 332 -262 5 603 3213 116 145 5 chr3RHet 2455926 2456507 -61000 - DMCR1A LINE CR1 -1880 2590 1929 5 603 2814 153 73 15 chr3RHet 2456548 2457067 -60440 - DMCR1A LINE CR1 -2688 1782 1234 5 603 603 120 344 0 chr3RHet 2457083 2457208 -60299 - DMCR1A LINE CR1 -3598 872 705 5 603 262 178 0 0 chr3RHet 2457242 2457287 -60220 - DMCR1A LINE CR1 -3851 619 575 5 603 922 149 18 98 chr3RHet 2457309 2457545 -59962 - DNAREP1_DM LINE Penelope -239 355 10 5 603 235 98 0 68 chr3RHet 2457547 2457591 -59916 + PROTOP_A DNA P 509 549 -556 5 603 1436 168 94 44 chr3RHet 2457589 2457995 -59512 - DMCR1A LINE CR1 -4038 432 7 5 603 253 191 58 14 chr3RHet 2458248 2458317 -59190 + DM176_LTR LTR Gypsy 295 366 -141 5 603 588 148 40 16 chr3RHet 2458334 2458458 -59049 + DMTOM1_LTR LTR Gypsy 284 410 0 5 603 409 100 14 28 chr3RHet 2458458 2458521 -58986 + DMTOM1_LTR LTR Gypsy 349 410 0 5 603 342 223 23 76 chr3RHet 2458521 2458652 -58855 + ROVER-I_DM LTR Gypsy 1 124 -6460 5 603 232 296 13 27 chr3RHet 2458753 2458902 -58605 + (TAAA)n Simple_repeat Simple_repeat 3 149 0 5 603 262 191 43 43 chr3RHet 2459091 2459206 -58301 + A-rich Low_complexity Low_complexity 3 117 0 5 603 10478 285 32 26 chr3RHet 2459232 2463633 -53874 + ROVER-I_DM LTR Gypsy 320 5266 -1318 5 603 1074 146 0 5 chr3RHet 2463631 2463824 -53683 + DM297_I LTR Gypsy 5490 5681 -486 5 603 826 126 0 83 chr3RHet 2463823 2463979 -53528 + DM176_I LTR Gypsy 6278 6420 0 5 603 253 191 58 14 chr3RHet 2464203 2464272 -53235 + DM176_LTR LTR Gypsy 295 366 -141 5 603 588 148 40 16 chr3RHet 2464289 2464413 -53094 + DMTOM1_LTR LTR Gypsy 284 410 0 5 603 409 100 14 28 chr3RHet 2464413 2464476 -53031 + DMTOM1_LTR LTR Gypsy 349 410 0 5 603 342 223 23 76 chr3RHet 2464476 2464607 -52900 + ROVER-I_DM LTR Gypsy 1 124 -6460 5 603 232 296 13 27 chr3RHet 2464708 2464857 -52650 + (TAAA)n Simple_repeat Simple_repeat 3 149 0 5 603 262 191 43 43 chr3RHet 2465046 2465161 -52346 + A-rich Low_complexity Low_complexity 3 117 0 5 603 10478 285 32 26 chr3RHet 2465187 2469588 -47919 + ROVER-I_DM LTR Gypsy 320 5266 -1318 5 603 1074 146 0 5 chr3RHet 2469586 2469779 -47728 + DM297_I LTR Gypsy 5490 5681 -486 5 603 826 126 0 83 chr3RHet 2469778 2469934 -47573 + DM176_I LTR Gypsy 6278 6420 0 5 603 253 191 58 14 chr3RHet 2470158 2470227 -47280 + DM176_LTR LTR Gypsy 295 366 -141 5 603 588 148 40 16 chr3RHet 2470244 2470368 -47139 + DMTOM1_LTR LTR Gypsy 284 410 0 5 603 409 100 14 28 chr3RHet 2470368 2470431 -47076 + DMTOM1_LTR LTR Gypsy 349 410 0 5 603 24 0 0 0 chr3RHet 2470438 2470462 -47045 + AT_rich Low_complexity Low_complexity 1 24 0 5 603 21 89 0 0 chr3RHet 2470498 2470554 -46953 + AT_rich Low_complexity Low_complexity 1 56 0 5 603 349 227 289 62 chr3RHet 2471015 2471265 -46242 - DNAREP1_DM LINE Penelope -284 310 4 5 603 264 182 180 11 chr3RHet 2472191 2472280 -45227 + DNAREP1_DM LINE Penelope 118 221 -373 5 603 1231 171 104 20 chr3RHet 2472285 2472679 -44828 + DNAREP1_DM LINE Penelope 1 546 -48 5 603 236 286 205 0 chr3RHet 2472678 2472790 -44717 + DNAREP1_DM LINE Penelope 281 415 -179 5 603 1218 93 273 9 chr3RHet 2473005 2473424 -44083 + DNAREP1_DM LINE Penelope 64 593 -1 5 603 22 0 0 0 chr3RHet 2473643 2473665 -43842 + AT_rich Low_complexity Low_complexity 1 22 0 5 603 767 133 209 0 chr3RHet 2475370 2475542 -41965 + DNAREP1_DM LINE Penelope 2 209 -385 5 603 1879 167 6 27 chr3RHet 2475535 2475989 -41518 + DNAREP1_DM LINE Penelope 90 450 -144 5 603 198 71 0 0 chr3RHet 2476249 2476277 -41230 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 5 603 261 146 0 0 chr3RHet 2476284 2476332 -41175 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 603 655 129 0 0 chr3RHet 2476401 2476502 -41005 - DNAREP1_DM LINE Penelope -484 110 10 5 603 51 70 0 0 chr3RHet 2478398 2478498 -39009 + AT_rich Low_complexity Low_complexity 1 100 0 5 603 292 144 520 80 chr3RHet 2479546 2479669 -37838 - DNAREP1_DM LINE Penelope 0 594 418 5 603 372 189 54 0 chr3RHet 2479719 2479793 -37714 - DNAREP1_DM LINE Penelope -510 84 7 5 603 450 244 60 60 chr3RHet 2479920 2480103 -37404 + DNAREP1_DM LINE Penelope 3 185 -409 5 603 273 98 0 0 chr3RHet 2481724 2481765 -35742 - DNAREP1_DM LINE Penelope -105 489 449 5 603 793 88 86 22 chr3RHet 2482568 2482707 -34800 - DNAREP1_DM LINE Penelope -264 330 183 5 603 27 49 0 0 chr3RHet 2482783 2482824 -34683 + AT_rich Low_complexity Low_complexity 1 41 0 5 603 42 57 0 0 chr3RHet 2483057 2483127 -34380 + AT_rich Low_complexity Low_complexity 1 70 0 5 603 4063 37 0 0 chr3RHet 2483580 2484071 -33436 - DMCR1A LINE CR1 -125 4345 3855 5 603 4505 62 120 6 chr3RHet 2484076 2484867 -32640 - DMCR1A LINE CR1 -979 3491 2611 5 603 31 68 0 0 chr3RHet 2484868 2484927 -32580 + AT_rich Low_complexity Low_complexity 1 59 0 5 603 15080 65 65 13 chr3RHet 2485075 2487837 -29670 + I_DM LINE I 103 3007 -3224 5 603 5450 38 5 3 chr3RHet 2488491 2489150 -28357 + IVK_DM LINE I 1 660 -4742 5 75 13551 50 103 10 chr3RHet 2489141 2491049 -26458 + IVK_DM LINE I 855 2940 -2462 5 604 3408 57 0 0 chr3RHet 2491049 2491474 -26033 + IVK_DM LINE I 4390 4814 -588 5 604 3747 39 36 0 chr3RHet 2491474 2491941 -25566 + IVK_DM LINE I 4917 5400 -2 5 604 238 175 73 73 chr3RHet 2492175 2492243 -25264 - Gypsy4_I LTR Gypsy -1897 4391 4324 5 604 3049 96 111 22 chr3RHet 2492871 2493368 -24139 - QUASIMODO_LTR LTR Gypsy -69 589 40 5 604 288 0 0 0 chr3RHet 2493368 2493400 -24107 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 604 3049 96 111 22 chr3RHet 2493400 2493443 -24064 - QUASIMODO_LTR LTR Gypsy -619 39 2 5 604 938 299 30 27 chr3RHet 2494481 2494883 -22624 - DOC2_DM LINE Jockey -537 4256 3854 5 604 472 368 0 22 chr3RHet 2495116 2495394 -22113 - DOC2_DM LINE Jockey -2075 2718 2447 5 604 671 295 45 30 chr3RHet 2495419 2495754 -21753 + Copia_I LTR Copia 1980 2319 -2274 5 604 762 97 0 0 chr3RHet 2496003 2496117 -21390 - BS LINE Jockey -15 5111 4998 5 604 423 281 47 12 chr3RHet 2496204 2496373 -21134 + Copia_I LTR Copia 3901 4075 -518 5 604 212 59 29 0 chr3RHet 2496425 2496459 -21048 + (TTAAA)n Simple_repeat Simple_repeat 4 38 0 5 604 1075 199 118 81 chr3RHet 2496508 2496981 -20526 + DNAREP1_DM LINE Penelope 137 593 -1 5 604 262 257 14 28 chr3RHet 2497151 2497223 -20284 + Copia_I LTR Copia 4438 4508 -85 5 604 4895 27 2 3 chr3RHet 2497295 2497890 -19617 - IDEFIX_LTR LTR Gypsy 0 594 1 5 604 8161 34 5 2 chr3RHet 2497890 2498945 -18562 - IDEFIX_I LTR Gypsy 0 5628 4571 5 604 5393 39 0 9 chr3RHet 2498945 2499637 -17870 - IDEFIX_I LTR Gypsy -2129 3499 2814 5 604 3277 5 0 0 chr3RHet 2499631 2500000 -17507 - IDEFIX_I LTR Gypsy -2941 2687 2319 5 604 11900 33 1 0 chr3RHet 2500000 2501436 -16071 - IDEFIX_I LTR Gypsy -3310 2318 881 5 604 6342 27 1 0 chr3RHet 2501434 2502202 -15305 - IDEFIX_I LTR Gypsy -4859 769 1 5 604 25 0 0 0 chr3RHet 2502472 2502497 -15010 + AT_rich Low_complexity Low_complexity 1 25 0 5 604 3237 30 13 0 chr3RHet 2502593 2502988 -14519 - IDEFIX_LTR LTR Gypsy -194 400 1 5 604 271 100 0 0 chr3RHet 2502956 2502996 -14511 + BARI1 DNA Tc1 3 42 -1708 5 604 1916 145 130 5 chr3RHet 2504106 2504798 -12709 - DNAREP1_DM LINE Penelope -10 584 58 5 604 427 121 0 0 chr3RHet 2506343 2506409 -11098 + DNAREP1_DM LINE Penelope 48 113 -481 5 604 1418 167 150 14 chr3RHet 2506522 2506869 -10638 - DNAREP1_DM LINE Penelope -31 563 170 5 604 320 145 161 0 chr3RHet 2506890 2506952 -10555 + DNAREP1_DM LINE Penelope 313 384 -210 5 604 41 66 0 0 chr3RHet 2507617 2507693 -9814 + AT_rich Low_complexity Low_complexity 1 76 0 5 604 242 164 0 113 chr3RHet 2507814 2507876 -9631 + PROTOP_B DNA P 487 541 -612 5 604 1296 116 235 58 chr3RHet 2508081 2508396 -9111 - DNAREP1_DM LINE Penelope -29 565 195 5 604 261 300 0 0 chr3RHet 2509103 2509173 -8334 - DNAREP1_DM LINE Penelope -149 445 376 5 604 540 199 125 13 chr3RHet 2509224 2509432 -8075 + DNAREP1_DM LINE Penelope 325 594 0 5 604 362 292 0 14 chr3RHet 2509484 2509623 -7884 - DNAREP1_DM LINE Penelope -401 193 57 5 604 209 132 113 0 chr3RHet 2509643 2509696 -7811 + (CTATT)n Simple_repeat Simple_repeat 3 61 0 5 604 256 45 21 43 chr3RHet 2509696 2509743 -7764 + (TTA)n Simple_repeat Simple_repeat 2 47 0 5 604 484 229 176 35 chr3RHet 2509879 2510078 -7429 - DNAREP1_DM LINE Penelope -62 532 306 5 604 252 241 0 0 chr3RHet 2510114 2510168 -7339 - DNAREP1_DM LINE Penelope -532 62 9 5 604 1699 130 158 24 chr3RHet 2510788 2511167 -6340 - DNAREP1_DM LINE Penelope -59 535 106 5 604 2671 84 139 27 chr3RHet 2511954 2512429 -5078 - DNAREP1_DM LINE Penelope -65 529 2 5 604 180 0 0 0 chr3RHet 2512934 2512954 -4553 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 5 604 203 219 0 76 chr3RHet 2512966 2513045 -4462 + A-rich Low_complexity Low_complexity 1 73 0 5 604 1388 183 112 60 chr3RHet 2513339 2513757 -3750 + PROTOP_B DNA P 183 622 -531 5 604 481 153 2 19 chr3RHet 2513848 2513951 -3556 + PROTOP_B DNA P 900 995 -158 5 604 31 0 0 0 chr3RHet 2514408 2514439 -3068 + AT_rich Low_complexity Low_complexity 1 31 0 5 604 731 169 31 18 chr3RHet 2515592 2515773 -1734 - DNAREP1_DM LINE Penelope -274 320 1 5 604 22 70 0 0 chr3RHet 2515952 2515995 -1512 + AT_rich Low_complexity Low_complexity 1 43 0 5 585 1373 97 29 0 chr3R 1972 2178 -27902875 - DNAREP1_DM LINE Penelope -370 224 13 4 585 237 153 110 14 chr3R 2174 2247 -27902806 + DNAREP1_DM LINE Penelope 196 275 -319 4 585 22 56 0 0 chr3R 3535 3571 -27901482 + AT_rich Low_complexity Low_complexity 1 36 0 4 585 1322 128 102 38 chr3R 3646 4070 -27900983 - DNAREP1_DM LINE Penelope -1 593 119 4 585 815 132 77 18 chr3R 4068 4238 -27900815 - DNAREP1_DM LINE Penelope -291 303 124 4 585 22 0 0 0 chr3R 5071 5093 -27899960 + AT_rich Low_complexity Low_complexity 1 22 0 4 585 1441 134 220 156 chr3R 6604 7162 -27897891 - DNAREP1_DM LINE Penelope 0 594 1 4 585 2002 123 72 3 chr3R 8723 9058 -27895995 + DNAREP1_DM LINE Penelope 24 381 -213 4 585 1218 144 165 64 chr3R 9077 9374 -27895679 - DNAREP1_DM LINE Penelope -25 569 243 4 585 21 36 0 0 chr3R 9406 9434 -27895619 + AT_rich Low_complexity Low_complexity 1 28 0 4 585 675 234 5 24 chr3R 10720 10930 -27894123 + DNAREP1_DM LINE Penelope 71 276 -318 4 585 326 172 11 33 chr3R 10917 11007 -27894046 + DNAREP1_DM LINE Penelope 203 290 -304 4 585 465 185 270 32 chr3R 11009 11221 -27893832 + DNAREP1_DM LINE Penelope 183 445 -149 4 585 741 122 137 0 chr3R 11258 11389 -27893664 - DNAREP1_DM LINE Penelope 0 594 446 4 585 299 134 449 173 chr3R 11413 11612 -27893441 - DNAREP1_DM LINE Penelope -137 457 256 4 585 786 196 92 36 chr3R 11883 12132 -27892921 - DNAREP1_DM LINE Penelope -221 373 111 4 585 1141 168 138 14 chr3R 12142 12431 -27892622 - DNAREP1_DM LINE Penelope -264 330 6 4 585 13006 63 4 2 chr3R 13432 15097 -27889956 + FB4_DM DNA Tc1 1094 2761 -1328 4 585 22 35 0 0 chr3R 15213 15242 -27889811 + AT_rich Low_complexity Low_complexity 1 29 0 4 585 510 115 177 0 chr3R 16787 16883 -27888170 - DNAREP1_DM LINE Penelope -46 548 436 4 585 7111 30 34 10 chr3R 17533 18421 -27886632 - TC1-2_DM DNA Tc1 0 1644 736 4 585 848 0 0 0 chr3R 18404 18495 -27886558 - TC1-2_DM DNA Tc1 -1553 91 1 4 585 1877 188 20 23 chr3R 18499 18890 -27886163 + Gypsy_LTR LTR Gypsy 1 390 -92 4 585 345 196 23 171 chr3R 18901 19030 -27886023 - DNAREP1_DM LINE Penelope -140 454 345 4 585 2089 134 14 29 chr3R 19154 19500 -27885553 - DNAREP1_DM LINE Penelope -63 531 191 4 585 598 140 142 29 chr3R 19531 19719 -27885334 - DNAREP1_DM LINE Penelope -262 332 117 4 585 366 86 17 17 chr3R 19751 19810 -27885243 - DNAREP1_DM LINE Penelope -535 59 1 4 585 21 71 0 0 chr3R 21977 22019 -27883034 + AT_rich Low_complexity Low_complexity 1 42 0 4 585 32 67 0 0 chr3R 22139 22199 -27882854 + AT_rich Low_complexity Low_complexity 1 60 0 4 585 962 150 60 37 chr3R 22233 22448 -27882605 + DNAREP1_DM LINE Penelope 86 305 -289 4 585 226 68 44 22 chr3R 22477 22522 -27882531 + (CATA)n Simple_repeat Simple_repeat 2 47 0 4 585 305 89 0 35 chr3R 22528 22580 -27882473 - DNAREP1_DM LINE Penelope -57 537 488 4 585 1108 79 140 43 chr3R 22580 22766 -27882287 - DNAREP1_DM LINE Penelope 0 594 391 4 585 21 0 0 0 chr3R 25547 25568 -27879485 + AT_rich Low_complexity Low_complexity 1 21 0 4 585 841 130 124 41 chr3R 25624 25793 -27879260 + DNAREP1_DM LINE Penelope 1 183 -411 4 585 323 208 28 0 chr3R 26188 26260 -27878793 + DNAREP1_DM LINE Penelope 19 92 -502 4 585 4224 38 0 16 chr3R 26312 26824 -27878229 - G5A_DM LINE Jockey 0 2841 2338 4 585 317 139 54 27 chr3R 26817 26891 -27878162 + DNAREP1_DM LINE Penelope 38 113 -481 4 585 1373 72 5 0 chr3R 26917 27116 -27877937 + Rehavkus-1_DY DNA Tc1 5647 5828 0 4 585 387 178 537 0 chr3R 27135 27292 -27877761 + DNAREP1_DM LINE Penelope 179 419 -175 4 585 332 224 60 0 chr3R 27469 27536 -27877517 - DNAREP1_DM LINE Penelope -518 76 6 4 585 334 154 169 60 chr3R 28750 28833 -27876220 - DNAREP1_DM LINE Penelope -2 592 501 4 585 2410 4 4 0 chr3R 31847 32113 -27872940 + MDG3_LTR LTR Gypsy 1 267 0 4 585 45658 1 0 0 chr3R 32112 37099 -27867954 + MDG3_I LTR Gypsy 1 4986 0 4 585 2410 4 4 0 chr3R 37099 37365 -27867688 + MDG3_LTR LTR Gypsy 1 267 0 4 585 185 0 40 0 chr3R 37551 37576 -27867477 + (TAA)n Simple_repeat Simple_repeat 3 28 0 4 585 30 0 0 0 chr3R 37578 37608 -27867445 + AT_rich Low_complexity Low_complexity 1 30 0 4 585 245 105 26 0 chr3R 41609 41647 -27863406 + PROTOP_B DNA P 507 545 -608 4 585 566 60 12 0 chr3R 43444 43527 -27861526 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 585 25 31 0 0 chr3R 44191 44223 -27860830 + AT_rich Low_complexity Low_complexity 1 32 0 4 585 2832 96 40 5 chr3R 48966 49396 -27855657 - FB4_DM DNA Tc1 -1330 2759 2315 4 585 3827 94 69 0 chr3R 49423 49990 -27855063 - FB4_DM DNA Tc1 -2136 1953 1348 4 585 770 103 0 0 chr3R 49991 50107 -27854946 - FB4_DM DNA Tc1 -2864 1225 1110 4 585 28 48 0 0 chr3R 55569 55611 -27849442 + AT_rich Low_complexity Low_complexity 1 42 0 4 585 21 82 0 0 chr3R 55688 55737 -27849316 + AT_rich Low_complexity Low_complexity 1 49 0 4 585 187 103 51 0 chr3R 69324 69363 -27835690 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 585 719 104 151 8 chr3R 71352 71478 -27833575 + DNAREP1_DM LINE Penelope 1 144 -450 4 585 417 228 0 0 chr3R 71497 71576 -27833477 + DNAREP1_DM LINE Penelope 373 451 -143 4 585 286 100 25 0 chr3R 71555 71595 -27833458 - DNAREP1_DM LINE Penelope -128 466 426 4 585 230 167 0 45 chr3R 71706 71750 -27833303 - DNAREP1_DM LINE Penelope -258 336 295 4 585 244 185 19 0 chr3R 71743 71797 -27833256 - DNAREP1_DM LINE Penelope -497 97 43 4 585 303 233 132 0 chr3R 71915 72044 -27833009 + P_DG DNA P 2743 2888 0 4 585 898 53 183 0 chr3R 71932 72063 -27832990 - DNAREP1_DM LINE Penelope -9 585 431 4 585 232 206 150 41 chr3R 72109 72256 -27832797 + TRANSPAC_I LTR Gypsy 1360 1522 -3068 4 585 209 161 0 0 chr3R 73073 73104 -27831949 + C-rich Low_complexity Low_complexity 3 33 0 4 585 22 0 0 0 chr3R 73964 73986 -27831067 + AT_rich Low_complexity Low_complexity 1 22 0 4 585 37 23 0 0 chr3R 79022 79066 -27825987 + AT_rich Low_complexity Low_complexity 1 44 0 4 585 217 178 22 0 chr3R 81658 81703 -27823350 + (CATA)n Simple_repeat Simple_repeat 3 48 0 4 585 2068 108 114 7 chr3R 81740 82144 -27822909 - DNAREP1_DM LINE Penelope 0 594 8 4 585 180 111 0 0 chr3R 83285 83312 -27821741 + (TTCTCC)n Simple_repeat Simple_repeat 1 27 0 4 585 322 57 38 0 chr3R 84297 84350 -27820703 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 585 5958 0 6 1 chr3R 84350 85004 -27820049 + QUASIMODO_LTR LTR Gypsy 2 658 0 4 585 53870 3 0 0 chr3R 85004 91064 -27813989 + QUASIMODO_I LTR Gypsy 1 6060 0 4 585 5818 0 6 2 chr3R 91064 91704 -27813349 + QUASIMODO_LTR LTR Gypsy 1 643 -15 4 585 200 114 0 28 chr3R 91714 91750 -27813303 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 4 585 258 153 31 92 chr3R 92380 92445 -27812608 + G6_DM LINE Jockey 1961 2021 -21 4 585 461 174 104 65 chr3R 94052 94206 -27810847 + DNAREP1_DM LINE Penelope 20 179 -415 4 585 2254 106 135 26 chr3R 94227 94874 -27810179 + DNAREP1_DM LINE Penelope 1 594 0 4 585 406 255 67 7 chr3R 94742 94892 -27810161 - P_DG DNA P 0 2888 2730 4 585 271 152 0 0 chr3R 94960 95006 -27810047 + DNAREP1_DM LINE Penelope 547 592 -2 4 585 1012 215 65 36 chr3R 96134 96511 -27808542 + DNAREP1_DM LINE Penelope 10 492 -102 4 585 2505 0 0 4 chr3R 96511 96787 -27808266 - BURDOCK_LTR LTR Gypsy 0 275 1 4 585 54206 2 0 0 chr3R 96788 102648 -27802405 - BURDOCK_I LTR Gypsy 0 5860 1 4 585 2505 0 0 4 chr3R 102648 102924 -27802129 - BURDOCK_LTR LTR Gypsy 0 275 1 4 585 273 172 0 49 chr3R 102925 102986 -27802067 + DNAREP1_DM LINE Penelope 500 557 -37 4 585 742 199 123 35 chr3R 103665 103925 -27801128 - DNAREP1_DM LINE Penelope -241 353 71 4 585 973 208 80 34 chr3R 104615 104946 -27800107 + DNAREP1_DM LINE Penelope 92 415 -179 4 585 318 145 194 0 chr3R 104974 105036 -27800017 + DNAREP1_DM LINE Penelope 521 594 0 4 585 23 0 0 0 chr3R 105438 105461 -27799592 + AT_rich Low_complexity Low_complexity 1 23 0 4 585 269 254 0 0 chr3R 107081 107152 -27797901 + GA-rich Low_complexity Low_complexity 1 71 0 4 585 238 159 23 0 chr3R 108998 109042 -27796011 - QUASIMODO_I LTR Gypsy -2991 3069 3025 4 585 25 65 0 0 chr3R 112463 112509 -27792544 + AT_rich Low_complexity Low_complexity 1 46 0 4 585 270 229 27 40 chr3R 114520 114670 -27790383 + (CTA)n Simple_repeat Simple_repeat 3 150 0 4 585 200 189 0 0 chr3R 121873 121910 -27783143 + (CCCTAA)n Simple_repeat Simple_repeat 5 41 0 4 585 191 146 0 24 chr3R 125387 125429 -27779624 + CT-rich Low_complexity Low_complexity 2 42 0 4 585 195 146 0 0 chr3R 125533 125574 -27779479 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 585 270 210 25 0 chr3R 125645 125726 -27779327 + (CAA)n Simple_repeat Simple_repeat 1 83 0 4 585 918 122 0 0 chr3R 126849 126997 -27778056 + (TA)n Simple_repeat Simple_repeat 2 149 0 4 585 255 265 12 0 chr3R 127430 127513 -27777540 + (TCTCTG)n Simple_repeat Simple_repeat 5 88 0 4 585 210 118 0 0 chr3R 130248 130282 -27774771 + (TATTG)n Simple_repeat Simple_repeat 2 35 0 4 586 1962 86 202 80 chr3R 132422 132950 -27772103 - DNAREP1_DM LINE Penelope 0 594 2 4 586 24 0 0 0 chr3R 136778 136802 -27768251 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 22 35 0 0 chr3R 136961 136990 -27768063 + AT_rich Low_complexity Low_complexity 1 29 0 4 586 31 58 0 0 chr3R 137080 137132 -27767921 + AT_rich Low_complexity Low_complexity 1 52 0 4 586 21 36 0 0 chr3R 140017 140045 -27765008 + AT_rich Low_complexity Low_complexity 1 28 0 4 586 238 91 0 0 chr3R 140224 140257 -27764796 - PROTOP_B DNA P -617 536 504 4 586 253 243 14 14 chr3R 143375 143446 -27761607 + (TTG)n Simple_repeat Simple_repeat 3 73 0 4 586 238 247 170 30 chr3R 146334 146434 -27758619 - DNAREP1_DM LINE Penelope -28 566 453 4 586 466 154 82 11 chr3R 148456 148554 -27756499 + DNAREP1_DM LINE Penelope 402 491 -103 4 586 225 241 0 0 chr3R 149221 149275 -27755778 + (CAG)n Simple_repeat Simple_repeat 1 54 0 4 586 22 70 0 0 chr3R 152030 152073 -27752980 + AT_rich Low_complexity Low_complexity 1 43 0 4 586 25 0 0 0 chr3R 152590 152615 -27752438 + AT_rich Low_complexity Low_complexity 1 25 0 4 586 23 33 0 0 chr3R 153384 153414 -27751639 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 22 35 0 0 chr3R 153800 153829 -27751224 + AT_rich Low_complexity Low_complexity 1 29 0 4 586 387 229 63 18 chr3R 156109 156220 -27748833 + DNAREP1_DM LINE Penelope 24 139 -455 4 586 972 104 117 71 chr3R 156218 156414 -27748639 + DNAREP1_DM LINE Penelope 390 594 0 4 586 404 200 112 144 chr3R 156416 156603 -27748450 + DNAREP1_DM LINE Penelope 267 447 -147 4 586 39 0 0 0 chr3R 157145 157184 -27747869 + AT_rich Low_complexity Low_complexity 1 39 0 4 586 1772 54 116 0 chr3R 160100 160342 -27744711 - DNAREP1_DM LINE Penelope 0 594 325 4 586 391 111 0 0 chr3R 160341 160395 -27744658 - DNAREP1_DM LINE Penelope -540 54 1 4 586 25 83 0 0 chr3R 160559 160619 -27744434 + AT_rich Low_complexity Low_complexity 1 60 0 4 586 23 0 0 0 chr3R 164700 164723 -27740330 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 26 50 0 0 chr3R 168428 168468 -27736585 + AT_rich Low_complexity Low_complexity 1 40 0 4 586 2372 152 60 22 chr3R 168723 169226 -27735827 + DNAREP1_DM LINE Penelope 117 594 0 4 586 305 330 0 0 chr3R 169596 169696 -27735357 + DNAREP1_DM LINE Penelope 390 489 -105 4 586 218 245 0 0 chr3R 171760 171809 -27733244 + (CGG)n Simple_repeat Simple_repeat 2 50 0 4 586 267 157 0 0 chr3R 172453 172504 -27732549 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 586 24 32 0 0 chr3R 175524 175555 -27729498 + AT_rich Low_complexity Low_complexity 1 31 0 4 586 1916 119 136 46 chr3R 176794 177244 -27727809 + DNAREP1_DM LINE Penelope 1 594 0 4 586 34 24 0 0 chr3R 177260 177301 -27727752 + AT_rich Low_complexity Low_complexity 1 41 0 4 586 515 171 0 0 chr3R 177646 177728 -27727325 + DNAREP1_DM LINE Penelope 1 82 -512 4 586 2290 42 7 37 chr3R 180867 181163 -27723890 - Gypsy4_LTR LTR Gypsy 0 287 1 4 586 275 200 14 0 chr3R 181427 181497 -27723556 + DNAREP1_DM LINE Penelope 185 255 -339 4 586 707 211 69 40 chr3R 181640 181842 -27723211 + DNAREP1_DM LINE Penelope 264 471 -123 4 586 431 121 15 0 chr3R 182154 182220 -27722833 + DNAREP1_DM LINE Penelope 1 67 -527 4 586 638 193 124 11 chr3R 182232 182410 -27722643 + DNAREP1_DM LINE Penelope 242 439 -155 4 586 450 254 84 34 chr3R 182469 182648 -27722405 + DMCR1A LINE CR1 3408 3595 -875 4 586 973 168 133 47 chr3R 182647 182903 -27722150 - DNAREP1_DM LINE Penelope -11 583 306 4 586 39 38 0 0 chr3R 182908 182961 -27722092 + AT_rich Low_complexity Low_complexity 1 53 0 4 586 374 209 50 50 chr3R 183010 183151 -27721902 - DNAREP1_DM LINE Penelope -453 141 1 4 586 228 222 0 36 chr3R 183739 183795 -27721258 + BARI_DM DNA Tc1 1176 1229 -499 4 586 24 32 0 0 chr3R 184107 184138 -27720915 + AT_rich Low_complexity Low_complexity 1 31 0 4 586 322 182 11 15 chr3R 187222 187296 -27717757 - DNAREP1_DM LINE Penelope -99 495 433 4 586 267 203 130 0 chr3R 187497 187566 -27717487 - DNAREP1_DM LINE Penelope -132 462 385 4 586 227 267 0 16 chr3R 187633 187694 -27717359 - DNAREP1_DM LINE Penelope -508 86 27 4 586 1722 75 183 52 chr3R 187743 188119 -27716934 - DNAREP1_DM LINE Penelope -42 552 1 4 586 4022 0 0 0 chr3R 192534 192962 -27712091 - ROO_LTR LTR Pao 0 428 1 4 586 13812 0 1 0 chr3R 192962 194479 -27710574 - ROO_I LTR Pao 0 8256 6738 4 586 53922 2 0 3 chr3R 194479 200431 -27704622 - ROO_I LTR Pao -2320 5936 1 4 586 4022 0 0 0 chr3R 200431 200859 -27704194 - ROO_LTR LTR Pao 0 428 1 4 586 216 216 0 75 chr3R 201999 202079 -27702974 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 4 586 27 29 0 0 chr3R 202474 202508 -27702545 + AT_rich Low_complexity Low_complexity 1 34 0 4 586 305 147 169 42 chr3R 203461 203532 -27701521 - DNAREP1_DM LINE Penelope -384 210 131 4 586 2791 132 103 10 chr3R 203796 204279 -27700774 + DNAREP1_DM LINE Penelope 67 594 0 4 586 373 243 41 41 chr3R 204148 204294 -27700759 - P_DG DNA P 0 2888 2743 4 586 23 33 0 0 chr3R 206116 206146 -27698907 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 23 33 0 0 chr3R 207088 207118 -27697935 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 38 39 0 0 chr3R 210379 210431 -27694622 + AT_rich Low_complexity Low_complexity 1 52 0 4 586 432 149 0 0 chr3R 212854 212921 -27692132 - DNAREP1_DM LINE Penelope 0 594 528 4 586 386 49 262 0 chr3R 212924 212985 -27692068 - DNAREP1_DM LINE Penelope -113 481 405 4 586 304 211 0 40 chr3R 213096 213170 -27691883 + DNAREP1_DM LINE Penelope 435 505 -89 4 586 21 0 0 0 chr3R 218051 218072 -27686981 + AT_rich Low_complexity Low_complexity 1 21 0 4 586 372 206 295 26 chr3R 218343 218499 -27686554 + DNAREP1_DM LINE Penelope 387 584 -10 4 586 25 65 0 0 chr3R 224034 224080 -27680973 + AT_rich Low_complexity Low_complexity 1 46 0 4 586 24 0 0 0 chr3R 226097 226121 -27678932 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 2826 128 105 34 chr3R 227759 228311 -27676742 - DNAREP1_DM LINE Penelope -3 591 1 4 586 27 62 0 0 chr3R 228480 228528 -27676525 + AT_rich Low_complexity Low_complexity 1 48 0 4 586 23 0 0 0 chr3R 232699 232722 -27672331 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 212 224 15 15 chr3R 232828 232896 -27672157 + A-rich Low_complexity Low_complexity 3 70 0 4 586 25 0 0 0 chr3R 234179 234204 -27670849 + AT_rich Low_complexity Low_complexity 1 25 0 4 586 38525 1 0 0 chr3R 234204 238426 -27666627 - DOC6_DM LINE Jockey 0 4222 1 4 586 636 103 41 0 chr3R 239717 239814 -27665239 + DNAREP1_DM LINE Penelope 1 101 -493 4 586 1446 132 77 28 chr3R 239837 240155 -27664898 + DNAREP1_DM LINE Penelope 214 586 -8 4 586 24 0 0 0 chr3R 241296 241320 -27663733 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 21 0 0 0 chr3R 241956 241977 -27663076 + AT_rich Low_complexity Low_complexity 1 21 0 4 586 645 193 376 51 chr3R 243435 243781 -27661272 - DNAREP1_DM LINE Penelope -134 460 2 4 586 23 54 0 0 chr3R 243791 243828 -27661225 + AT_rich Low_complexity Low_complexity 1 37 0 4 586 24 0 0 0 chr3R 245834 245858 -27659195 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 225 208 170 0 chr3R 246063 246116 -27658937 + DNAREP1_DM LINE Penelope 1 62 -532 4 586 277 244 0 25 chr3R 246888 246965 -27658088 + DNAREP1_DM LINE Penelope 435 509 -85 4 586 2978 29 0 14 chr3R 246965 247321 -27657732 + ROOA_LTR LTR Pao 1 351 -35 4 586 25 0 0 0 chr3R 247899 247924 -27657129 + AT_rich Low_complexity Low_complexity 1 25 0 4 586 30 0 0 0 chr3R 248366 248396 -27656657 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 23 0 0 0 chr3R 249135 249158 -27655895 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 22 0 0 0 chr3R 252864 252886 -27652167 + AT_rich Low_complexity Low_complexity 1 22 0 4 586 26 64 0 0 chr3R 260010 260057 -27644996 + AT_rich Low_complexity Low_complexity 1 47 0 4 586 274 167 37 0 chr3R 260145 260199 -27644854 - DNAREP1_DM LINE Penelope -163 431 376 4 586 23 33 0 0 chr3R 260335 260365 -27644688 + AT_rich Low_complexity Low_complexity 1 30 0 4 587 198 103 0 0 chr3R 263451 263480 -27641573 + (CAG)n Simple_repeat Simple_repeat 1 29 0 4 587 267 175 0 0 chr3R 266282 266362 -27638691 + ROO_I LTR Pao 641 720 -7536 4 587 22 0 0 0 chr3R 270544 270566 -27634487 + AT_rich Low_complexity Low_complexity 1 22 0 4 587 23 33 0 0 chr3R 279930 279960 -27625093 + AT_rich Low_complexity Low_complexity 1 30 0 4 587 195 186 0 0 chr3R 281214 281257 -27623796 + (ATG)n Simple_repeat Simple_repeat 1 43 0 4 587 281 207 17 0 chr3R 285354 285412 -27619641 + DNAREP1_DM LINE Penelope 1 59 -535 4 587 270 136 0 0 chr3R 286777 286821 -27618232 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 587 235 118 0 0 chr3R 289989 290023 -27615030 + DNAREP1_DM LINE Penelope 559 592 -2 4 587 210 118 0 0 chr3R 295431 295465 -27609588 + (ATGGTG)n Simple_repeat Simple_repeat 3 36 0 4 587 24 0 0 0 chr3R 297793 297817 -27607236 + AT_rich Low_complexity Low_complexity 1 24 0 4 587 189 74 0 0 chr3R 298520 298547 -27606506 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 587 240 177 16 16 chr3R 298948 299011 -27606042 + (TATAA)n Simple_repeat Simple_repeat 2 64 0 4 587 41 21 0 0 chr3R 300309 300357 -27604696 + AT_rich Low_complexity Low_complexity 1 48 0 4 587 29 0 0 0 chr3R 301067 301096 -27603957 + AT_rich Low_complexity Low_complexity 1 29 0 4 587 240 170 64 0 chr3R 302117 302164 -27602889 - DNAREP1_DM LINE Penelope -6 588 539 4 587 234 231 149 32 chr3R 302173 302267 -27602786 - DNAREP1_DM LINE Penelope -486 108 4 4 587 362 39 0 38 chr3R 303371 303424 -27601629 + (CATA)n Simple_repeat Simple_repeat 2 52 0 4 587 504 256 52 29 chr3R 305589 305762 -27599291 + DNAREP1_DM LINE Penelope 22 198 -396 4 587 271 161 318 11 chr3R 305963 306051 -27599002 + DNAREP1_DM LINE Penelope 460 574 -20 4 587 325 277 91 16 chr3R 306209 306330 -27598723 + DNAREP1_DM LINE Penelope 443 572 -22 4 587 30 45 0 0 chr3R 306332 306376 -27598677 + AT_rich Low_complexity Low_complexity 1 44 0 4 587 409 179 198 35 chr3R 309882 309998 -27595055 - DNAREP1_DM LINE Penelope 0 594 460 4 587 535 137 118 0 chr3R 310014 310116 -27594937 - DMCR1A LINE CR1 -256 4214 4101 4 587 21 0 0 0 chr3R 310595 310616 -27594437 + AT_rich Low_complexity Low_complexity 1 21 0 4 587 33 66 0 0 chr3R 310628 310689 -27594364 + AT_rich Low_complexity Low_complexity 1 61 0 4 587 354 211 0 0 chr3R 312900 313009 -27592044 + GA-rich Low_complexity Low_complexity 5 113 0 4 587 6207 73 194 4 chr3R 313716 314890 -27590163 + TC1-2_DM DNA Tc1 63 1458 -186 4 587 226 67 0 0 chr3R 314888 314918 -27590135 + TC1-2_DM DNA Tc1 1615 1644 0 4 587 859 117 24 131 chr3R 315353 315559 -27589494 + BS3_DM LINE Jockey 1607 1790 0 4 587 584 219 95 20 chr3R 315964 316198 -27588855 + DNAREP1_DM LINE Penelope 1 380 -214 4 587 5837 94 47 0 chr3R 316331 317159 -27587894 + S_DM DNA Tc1 581 1447 -289 4 587 1054 60 0 7 chr3R 317156 317308 -27587745 + S_DM DNA Tc1 1586 1736 0 4 587 21 0 0 0 chr3R 318282 318303 -27586750 + AT_rich Low_complexity Low_complexity 1 21 0 4 587 235 236 0 0 chr3R 321972 322044 -27583009 + DNAREP1_DM LINE Penelope 501 572 -22 4 587 25 0 0 0 chr3R 323197 323222 -27581831 + AT_rich Low_complexity Low_complexity 1 25 0 4 587 14960 31 19 4 chr3R 323625 325400 -27579653 - FW2_DM LINE Jockey 0 3961 2161 4 587 1844 5 14 23 chr3R 325400 325617 -27579436 - FW2_DM LINE Jockey -1937 2024 1810 4 587 13905 33 19 4 chr3R 325614 327294 -27577759 - FW2_DM LINE Jockey -2256 1705 1 4 587 27 0 0 0 chr3R 327402 327429 -27577624 + AT_rich Low_complexity Low_complexity 1 27 0 4 587 483 206 92 58 chr3R 327498 327653 -27577400 + DNAREP1_DM LINE Penelope 368 495 -99 4 587 1170 132 364 35 chr3R 329856 330291 -27574762 + DNAREP1_DM LINE Penelope 1 578 -16 4 587 26 50 0 0 chr3R 332107 332147 -27572906 + AT_rich Low_complexity Low_complexity 1 40 0 4 587 1261 108 115 14 chr3R 332207 332424 -27572629 - DNAREP1_DM LINE Penelope -97 497 259 4 587 7915 55 71 8 chr3R 332410 333503 -27571550 - Jockey2 LINE Jockey -5 3423 2262 4 587 261 100 180 0 chr3R 333570 333620 -27571433 - DNAREP1_DM LINE Penelope -534 60 2 4 587 286 224 0 0 chr3R 333687 333745 -27571308 - DNAREP1_DM LINE Penelope -517 77 20 4 587 237 0 0 0 chr3R 334817 334843 -27570210 - DNAREP1_DM LINE Penelope -1 593 568 4 587 1301 140 63 17 chr3R 334898 335137 -27569916 - DNAREP1_DM LINE Penelope -20 574 325 4 587 1555 117 11 43 chr3R 337553 337831 -27567222 + TC1-2_DM DNA Tc1 11 279 -1365 4 587 29 94 0 0 chr3R 339899 339984 -27565069 + AT_rich Low_complexity Low_complexity 1 85 0 4 587 1136 61 183 12 chr3R 340954 341200 -27563853 - FB4_DM DNA Tc1 -1329 2760 2473 4 587 8332 94 18 21 chr3R 341204 342461 -27562592 - FB4_DM DNA Tc1 -1729 2360 1107 4 587 25 31 0 0 chr3R 342768 342800 -27562253 + AT_rich Low_complexity Low_complexity 1 32 0 4 587 197 86 57 0 chr3R 342983 343018 -27562035 + (CTTAA)n Simple_repeat Simple_repeat 3 39 0 4 587 3365 102 111 12 chr3R 343119 343977 -27561076 + PROTOP DNA P 1051 1993 -2487 4 587 227 128 0 0 chr3R 343975 344010 -27561043 + PROTOP DNA P 2167 2201 -2279 4 587 1910 42 0 28 chr3R 344010 344257 -27560796 + LOOPER1_DM DNA PiggyBac 1 240 -1641 4 587 261 33 0 0 chr3R 344259 344289 -27560764 - S_DM DNA Tc1 0 1736 1707 4 587 1753 81 4 4 chr3R 344297 344570 -27560483 - S_DM DNA Tc1 -1463 273 1 4 587 5174 37 0 40 chr3R 344571 345251 -27559802 + LOOPER1_DM DNA PiggyBac 242 894 -987 4 587 1428 72 68 0 chr3R 345246 345468 -27559585 + LOOPER1_DM DNA PiggyBac 1141 1377 -504 4 587 1407 85 0 0 chr3R 345490 345713 -27559340 + S_DM DNA Tc1 1514 1736 0 4 587 21 71 0 0 chr3R 345793 345835 -27559218 + AT_rich Low_complexity Low_complexity 1 42 0 4 587 29 0 0 0 chr3R 346355 346384 -27558669 + AT_rich Low_complexity Low_complexity 1 29 0 4 587 24 32 0 0 chr3R 346843 346874 -27558179 + AT_rich Low_complexity Low_complexity 1 31 0 4 587 236 132 26 0 chr3R 346993 347031 -27558022 - DNAREP1_DM LINE Penelope -544 50 12 4 587 24 77 0 0 chr3R 347572 347624 -27557429 + AT_rich Low_complexity Low_complexity 1 52 0 4 587 759 203 192 7 chr3R 349258 349555 -27555498 + DMCR1A LINE CR1 7 358 -4112 4 587 719 222 171 23 chr3R 349582 349840 -27555213 + DMCR1A LINE CR1 493 788 -3682 4 587 28 0 0 0 chr3R 350506 350534 -27554519 + AT_rich Low_complexity Low_complexity 1 28 0 4 587 327 250 33 0 chr3R 350812 350904 -27554149 - BARI1 DNA Tc1 -691 1059 965 4 587 743 234 66 99 chr3R 350918 351250 -27553803 - DNAREP1_DM LINE Penelope -20 574 254 4 587 257 192 0 0 chr3R 351256 351308 -27553745 - DNAREP1_DM LINE Penelope -542 52 1 4 587 346 201 250 0 chr3R 351305 351449 -27553604 - BARI1 DNA Tc1 -1223 527 348 4 587 626 102 102 0 chr3R 351758 351856 -27553197 - DNAREP1_DM LINE Penelope -482 112 5 4 587 22 0 0 0 chr3R 354355 354377 -27550676 + AT_rich Low_complexity Low_complexity 1 22 0 4 587 344 214 48 0 chr3R 354616 354700 -27550353 - DNAREP1_DM LINE Penelope -486 108 21 4 587 23 0 0 0 chr3R 355457 355480 -27549573 + AT_rich Low_complexity Low_complexity 1 23 0 4 587 437 233 53 23 chr3R 355626 355758 -27549295 + DNAREP1_DM LINE Penelope 457 592 -2 4 587 216 67 0 0 chr3R 356549 356579 -27548474 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 587 188 137 0 19 chr3R 356927 356979 -27548074 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 4 587 456 235 250 21 chr3R 357232 357464 -27547589 + DNAREP1_DM LINE Penelope 131 415 -179 4 587 291 231 0 71 chr3R 358349 358431 -27546622 + DNAREP1_DM LINE Penelope 415 490 -104 4 587 349 74 275 14 chr3R 358431 358500 -27546553 + S_DM DNA Tc1 1 87 -1649 4 587 275 164 162 14 chr3R 361751 361825 -27543228 + DNAREP1_DM LINE Penelope 414 498 -96 4 587 265 132 0 0 chr3R 361837 361875 -27543178 + DNAREP1_DM LINE Penelope 556 593 -1 4 587 272 182 42 74 chr3R 363662 363757 -27541296 - ROO_I LTR Pao -7514 742 651 4 587 228 220 0 0 chr3R 363989 364048 -27541005 + GA-rich Low_complexity Low_complexity 1 59 0 4 587 7021 75 38 77 chr3R 364655 365855 -27539198 - PROTOP_B DNA P 0 1153 1 4 587 311 50 0 0 chr3R 365931 365971 -27539082 - DNAREP1_DM LINE Penelope -554 40 1 4 587 29 28 0 0 chr3R 367043 367079 -27537974 + AT_rich Low_complexity Low_complexity 1 36 0 4 587 678 162 0 0 chr3R 367832 368011 -27537042 + (CAA)n Simple_repeat Simple_repeat 2 180 0 4 587 432 143 0 0 chr3R 368034 368132 -27536921 + (CAA)n Simple_repeat Simple_repeat 3 100 0 4 587 386 78 0 0 chr3R 370769 370820 -27534233 - DNAREP1_DM LINE Penelope 0 594 544 4 587 467 195 0 0 chr3R 370832 370919 -27534134 - DNAREP1_DM LINE Penelope -156 438 352 4 587 688 158 150 7 chr3R 370915 371068 -27533985 - DNAREP1_DM LINE Penelope -418 176 2 4 587 257 299 0 0 chr3R 371501 371578 -27533475 - DNAREP1_DM LINE Penelope -517 77 1 4 587 637 179 186 0 chr3R 372677 372817 -27532236 + DMRT1B LINE R1 4899 5064 -119 4 587 242 184 0 20 chr3R 372861 372911 -27532142 + DMRT1C LINE R1 166 214 -5229 4 587 318 106 0 0 chr3R 373276 373323 -27531730 - DNAREP1_DM LINE Penelope -365 229 183 4 587 388 150 0 0 chr3R 373324 373384 -27531669 - DNAREP1_DM LINE Penelope -533 61 2 4 587 345 132 0 0 chr3R 373519 373572 -27531481 + DNAREP1_DM LINE Penelope 37 89 -505 4 587 236 20 75 38 chr3R 373576 373629 -27531424 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 4 587 1552 150 166 73 chr3R 373653 374099 -27530954 + DNAREP1_DM LINE Penelope 108 594 0 4 587 302 261 72 0 chr3R 374578 374689 -27530364 - DNAREP1_DM LINE Penelope -20 574 456 4 587 44 0 0 0 chr3R 374972 375016 -27530037 + AT_rich Low_complexity Low_complexity 1 44 0 4 587 287 326 75 0 chr3R 375174 375321 -27529732 + DMCR1A LINE CR1 1851 2008 -2462 4 587 807 114 158 7 chr3R 378808 378990 -27526063 + DNAREP1_DM LINE Penelope 117 332 -262 4 587 26 0 0 0 chr3R 379142 379168 -27525885 + AT_rich Low_complexity Low_complexity 1 26 0 4 587 24 32 0 0 chr3R 381328 381359 -27523694 + AT_rich Low_complexity Low_complexity 1 31 0 4 587 1099 199 244 63 chr3R 381419 381862 -27523191 + DNAREP1_DM LINE Penelope 5 527 -67 4 587 1440 100 18 18 chr3R 385595 385820 -27519233 - FB4_DM DNA Tc1 -1475 2614 2390 4 587 600 175 0 9 chr3R 385821 385936 -27519117 - FB4_DM DNA Tc1 -1813 2276 2163 4 587 1912 134 131 2 chr3R 385972 386581 -27518472 - FB4_DM DNA Tc1 -2179 1910 1223 4 587 484 105 2 283 chr3R 387906 388079 -27516974 + DNAREP1_DM LINE Penelope 123 377 -217 4 587 3803 44 27 4 chr3R 388617 389100 -27515953 + S2_DM DNA Tc1 634 1127 -608 4 587 3080 49 30 28 chr3R 389099 389560 -27515493 + S2_DM DNA Tc1 1274 1735 0 4 587 2280 19 0 0 chr3R 391096 391354 -27513699 + PROTOP_A DNA P 848 1105 0 4 587 273 120 20 0 chr3R 391354 391404 -27513649 + TC1-2_DM DNA Tc1 409 459 -1185 4 587 683 110 83 17 chr3R 391399 391519 -27513534 + TC1-2_DM DNA Tc1 1036 1163 -481 4 587 6900 45 69 19 chr3R 391521 392483 -27512570 + TRANSIB3 DNA Transib 1 1010 -1873 4 587 3239 47 72 9 chr3R 392480 392936 -27512117 + TRANSIB3 DNA Transib 2399 2883 0 4 588 2683 53 64 5 chr3R 396467 396843 -27508210 + BARI1 DNA Tc1 1286 1683 -67 4 588 1416 127 18 90 chr3R 396901 397178 -27507875 + HOBO DNA hAT 1 257 -2759 4 588 245 125 0 0 chr3R 397206 397246 -27507807 + PROTOP_B DNA P 47 86 -1067 4 588 243 95 81 0 chr3R 397281 397355 -27507698 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 588 897 60 13 57 chr3R 397357 397515 -27507538 + PROTOP_B DNA P 313 463 -690 4 588 1685 155 142 3 chr3R 397516 397853 -27507200 + HOBO DNA hAT 2632 3015 -1 4 588 611 271 40 40 chr3R 400047 400473 -27504580 + Transib5 DNA Transib 1 426 -2575 4 588 877 179 13 29 chr3R 401148 401432 -27503621 - HELENA_RT LINE Jockey -2 1315 1210 4 588 2448 126 3 0 chr3R 401640 402020 -27503033 - MINOS DNA Tc1 -351 1424 1044 4 588 622 156 98 0 chr3R 402056 402178 -27502875 + PROTOP_B DNA P 79 212 -941 4 588 23 0 0 0 chr3R 402873 402896 -27502157 + AT_rich Low_complexity Low_complexity 1 23 0 4 588 21 57 0 0 chr3R 403093 403128 -27501925 + AT_rich Low_complexity Low_complexity 1 35 0 4 588 401 118 44 0 chr3R 403356 403424 -27501629 - DNAREP1_DM LINE Penelope -279 315 245 4 588 21 0 0 0 chr3R 405184 405205 -27499848 + AT_rich Low_complexity Low_complexity 1 21 0 4 588 258 226 0 0 chr3R 405260 405313 -27499740 - Transib5 DNA Transib -612 2389 2337 4 588 5658 26 94 43 chr3R 405386 406627 -27498426 - DMCR1A LINE CR1 0 4470 3167 4 588 640 298 43 38 chr3R 406752 407254 -27497799 - Transib5 DNA Transib -1048 1953 1422 4 588 6784 4 7 0 chr3R 408018 408767 -27496286 + BS4_DM LINE Jockey 1 754 0 4 588 24 67 0 0 chr3R 408777 408822 -27496231 + AT_rich Low_complexity Low_complexity 1 45 0 4 588 1254 161 40 67 chr3R 408893 409193 -27495860 + DNAREP1_DM LINE Penelope 107 398 -196 4 588 62 36 0 0 chr3R 409276 409359 -27495694 + AT_rich Low_complexity Low_complexity 1 83 0 4 588 191 32 0 61 chr3R 409604 409637 -27495416 + (TATAA)n Simple_repeat Simple_repeat 4 34 0 4 588 278 271 0 0 chr3R 411337 411407 -27493646 + DNAREP1_DM LINE Penelope 515 584 -10 4 588 700 213 198 16 chr3R 411718 411966 -27493087 + DNAREP1_DM LINE Penelope 3 295 -299 4 588 405 138 11 44 chr3R 411975 412066 -27492987 + DNAREP1_DM LINE Penelope 482 569 -25 4 588 352 164 0 0 chr3R 412204 412265 -27492788 - DNAREP1_DM LINE Penelope -532 62 2 4 588 365 125 0 0 chr3R 412263 412319 -27492734 - DNAREP1_DM LINE Penelope 0 594 539 4 588 455 55 0 0 chr3R 412347 412402 -27492651 - DNAREP1_DM LINE Penelope -151 443 389 4 588 457 215 37 9 chr3R 412399 412507 -27492546 - DNAREP1_DM LINE Penelope -390 204 94 4 588 446 193 156 0 chr3R 412791 412900 -27492153 - DNAREP1_DM LINE Penelope -98 496 371 4 588 318 71 0 0 chr3R 413600 413642 -27491411 - DNAREP1_DM LINE Penelope 0 594 553 4 588 216 86 0 0 chr3R 413697 413732 -27491321 + (TTA)n Simple_repeat Simple_repeat 1 35 0 4 588 478 101 174 33 chr3R 413746 413838 -27491215 - DMRP1 Unknown Unknown -216 130 26 4 588 294 175 0 34 chr3R 414158 414217 -27490836 - DNAREP1_DM LINE Penelope -120 474 418 4 588 2096 113 99 127 chr3R 415182 415678 -27489375 - DNAREP1_DM LINE Penelope -112 482 1 4 588 815 58 10 0 chr3R 416944 417048 -27488005 + DNAREP1_DM LINE Penelope 2 106 -488 4 588 338 0 0 0 chr3R 417071 417111 -27487942 + DNAREP1_DM LINE Penelope 534 573 -21 4 588 253 157 20 0 chr3R 417110 417161 -27487892 + PROTOP_B DNA P 506 557 -596 4 588 849 316 151 20 chr3R 417815 418271 -27486782 + Gypsy12_I LTR Gypsy 3980 4498 -1048 4 588 207 0 0 0 chr3R 418271 418294 -27486759 + (CTATA)n Simple_repeat Simple_repeat 3 25 0 4 588 849 316 151 20 chr3R 418294 418374 -27486679 + Gypsy12_I LTR Gypsy 4499 4586 -960 4 588 599 291 138 24 chr3R 418408 418704 -27486349 + Gypsy12_I LTR Gypsy 4723 5052 -494 4 588 546 244 11 44 chr3R 419335 419515 -27485538 + M4DM DNA Transib 216 389 -1046 4 588 432 239 35 42 chr3R 419807 419951 -27485102 + M4DM DNA Transib 791 933 -502 4 588 24 77 0 0 chr3R 420231 420283 -27484770 + AT_rich Low_complexity Low_complexity 1 52 0 4 588 225 159 23 0 chr3R 421195 421239 -27483814 + DNAREP1_DM LINE Penelope 550 594 0 4 588 291 187 253 0 chr3R 421632 421723 -27483330 - PROTOP_B DNA P -1010 143 30 4 588 1088 164 42 35 chr3R 422293 422552 -27482501 - DNAREP1_DM LINE Penelope -333 261 1 4 588 39 0 0 0 chr3R 422897 422936 -27482117 + AT_rich Low_complexity Low_complexity 1 39 0 4 588 434 259 129 6 chr3R 424664 424835 -27480218 + DNAREP1_DM LINE Penelope 302 493 -101 4 588 211 222 19 48 chr3R 425841 425945 -27479108 + T-rich Low_complexity Low_complexity 2 102 0 4 588 25 31 0 0 chr3R 426084 426116 -27478937 + AT_rich Low_complexity Low_complexity 1 32 0 4 588 22 0 0 0 chr3R 426432 426454 -27478599 + AT_rich Low_complexity Low_complexity 1 22 0 4 588 281 203 34 0 chr3R 427787 427846 -27477207 - DNAREP1_DM LINE Penelope -140 454 394 4 588 840 161 155 38 chr3R 428684 428897 -27476156 - DNAREP1_DM LINE Penelope 0 594 357 4 588 225 232 0 18 chr3R 429930 429987 -27475066 - DNAREP1_DM LINE Penelope -538 56 1 4 588 28 48 0 0 chr3R 430290 430332 -27474721 + AT_rich Low_complexity Low_complexity 1 42 0 4 588 679 198 24 41 chr3R 430353 430522 -27474531 + DNAREP1_DM LINE Penelope 328 493 -101 4 588 657 105 69 46 chr3R 431212 431342 -27473711 + DNAREP1_DM LINE Penelope 1 133 -461 4 588 29 84 0 0 chr3R 432023 432094 -27472959 + AT_rich Low_complexity Low_complexity 1 71 0 4 588 582 134 41 82 chr3R 432095 432217 -27472836 + DNAREP1_DM LINE Penelope 343 459 -135 4 588 274 0 0 0 chr3R 433458 433488 -27471565 + Invader3_LTR LTR Gypsy 1 30 -268 4 588 254 102 98 33 chr3R 433498 433559 -27471494 - PROTOP_A DNA P -558 547 483 4 588 1669 98 0 39 chr3R 433574 433829 -27471224 + Invader3_LTR LTR Gypsy 54 298 0 4 588 760 244 113 8 chr3R 433872 434120 -27470933 - DNAREP1_DM LINE Penelope -49 545 272 4 588 9288 21 4 3 chr3R 435326 436430 -27468623 + PROTOP_A DNA P 1 1105 0 4 588 506 233 85 23 chr3R 438001 438177 -27466876 - DNAREP1_DM LINE Penelope -406 188 2 4 588 26 0 0 0 chr3R 441028 441054 -27463999 + AT_rich Low_complexity Low_complexity 1 26 0 4 588 1277 180 221 9 chr3R 441156 441481 -27463572 + DNAREP1_DM LINE Penelope 160 553 -41 4 588 22 56 0 0 chr3R 441769 441805 -27463248 + AT_rich Low_complexity Low_complexity 1 36 0 4 588 1044 139 124 0 chr3R 442437 442638 -27462415 - DNAREP1_DM LINE Penelope -14 580 355 4 588 421 213 0 50 chr3R 442643 442742 -27462311 - DNAREP1_DM LINE Penelope -500 94 1 4 588 31 76 0 0 chr3R 444030 444096 -27460957 + AT_rich Low_complexity Low_complexity 1 66 0 4 588 22 35 0 0 chr3R 444248 444277 -27460776 + AT_rich Low_complexity Low_complexity 1 29 0 4 588 296 232 24 0 chr3R 444621 444703 -27460350 - DNAREP1_DM LINE Penelope -298 296 213 4 588 466 202 139 23 chr3R 446143 446315 -27458738 - DNAREP1_DM LINE Penelope -208 386 195 4 588 557 154 38 19 chr3R 446664 446770 -27458283 + DNAREP1_DM LINE Penelope 1 108 -486 4 588 1031 135 216 52 chr3R 446771 447021 -27458032 + DNAREP1_DM LINE Penelope 304 594 0 4 588 227 243 0 39 chr3R 448332 448409 -27456644 + ROO_I LTR Pao 656 729 -7527 4 588 23 68 0 0 chr3R 449695 449739 -27455314 + AT_rich Low_complexity Low_complexity 1 44 0 4 588 236 234 0 45 chr3R 450256 450323 -27454730 - DNAREP1_DM LINE Penelope -53 541 478 4 588 1156 153 326 20 chr3R 451954 452248 -27452805 - DNAREP1_DM LINE Penelope 0 594 211 4 588 335 238 10 13 chr3R 452293 452397 -27452656 - DNAREP1_DM LINE Penelope -21 573 503 4 588 571 15 0 0 chr3R 455596 455661 -27449392 + DNAREP1_DM LINE Penelope 510 574 -20 4 588 290 27 27 0 chr3R 455658 455695 -27449358 - PROTOP_B DNA P -611 542 505 4 588 263 75 25 0 chr3R 455661 455701 -27449352 + PROTOP_A DNA P 509 549 -556 4 588 253 0 0 0 chr3R 455691 455718 -27449335 + DNAREP1_DM LINE Penelope 568 594 0 4 588 21 36 0 0 chr3R 457088 457116 -27447937 + AT_rich Low_complexity Low_complexity 1 28 0 4 588 811 149 173 52 chr3R 457129 457320 -27447733 - DNAREP1_DM LINE Penelope -29 565 352 4 588 517 79 0 0 chr3R 457336 457399 -27447654 - DNAREP1_DM LINE Penelope -531 63 1 4 588 658 159 282 0 chr3R 459777 459940 -27445113 - DNAREP1_DM LINE Penelope -11 583 375 4 588 34 0 0 0 chr3R 460926 460960 -27444093 + AT_rich Low_complexity Low_complexity 1 34 0 4 588 225 59 88 0 chr3R 461069 461103 -27443950 - PROTOP_B DNA P -608 545 509 4 588 347 224 212 17 chr3R 461327 461445 -27443608 + DNAREP1_DM LINE Penelope 1 141 -453 4 588 203 136 22 22 chr3R 462404 462449 -27442604 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 4 588 272 62 208 0 chr3R 462536 462584 -27442469 - DNAREP1_DM LINE Penelope 0 594 537 4 588 1098 125 73 6 chr3R 462558 462735 -27442318 + DNAREP1_DM LINE Penelope 263 451 -143 4 588 238 211 208 14 chr3R 466509 466581 -27438472 + DNAREP1_DM LINE Penelope 444 529 -65 4 588 192 231 0 0 chr3R 466828 466880 -27438173 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 4 588 33 43 0 0 chr3R 467411 467458 -27437595 + AT_rich Low_complexity Low_complexity 1 47 0 4 588 201 154 0 0 chr3R 468732 468771 -27436282 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 588 24 53 0 0 chr3R 469110 469148 -27435905 + AT_rich Low_complexity Low_complexity 1 38 0 4 588 24 0 0 0 chr3R 471288 471312 -27433741 + AT_rich Low_complexity Low_complexity 1 24 0 4 588 33 0 0 0 chr3R 476234 476267 -27428786 + AT_rich Low_complexity Low_complexity 1 33 0 4 588 22 56 0 0 chr3R 483256 483292 -27421761 + AT_rich Low_complexity Low_complexity 1 36 0 4 588 630 0 0 0 chr3R 483562 483632 -27421421 + (TTA)n Simple_repeat Simple_repeat 3 72 0 4 588 25 31 0 0 chr3R 483663 483695 -27421358 + AT_rich Low_complexity Low_complexity 1 32 0 4 588 26 0 0 0 chr3R 484627 484653 -27420400 + AT_rich Low_complexity Low_complexity 1 26 0 4 588 924 80 0 0 chr3R 484812 484937 -27420116 + BS LINE Jockey 5001 5125 -1 4 588 24 0 0 0 chr3R 485014 485038 -27420015 + AT_rich Low_complexity Low_complexity 1 24 0 4 588 186 222 0 0 chr3R 485851 485905 -27419148 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 588 22 56 0 0 chr3R 487291 487327 -27417726 + AT_rich Low_complexity Low_complexity 1 36 0 4 588 180 158 0 0 chr3R 492906 492944 -27412109 + (CAG)n Simple_repeat Simple_repeat 1 38 0 4 588 241 26 53 0 chr3R 493845 493883 -27411170 + (GGA)n Simple_repeat Simple_repeat 1 40 0 4 588 38 39 0 0 chr3R 500440 500492 -27404561 + AT_rich Low_complexity Low_complexity 1 52 0 4 588 235 237 0 17 chr3R 503046 503106 -27401947 + (CAA)n Simple_repeat Simple_repeat 2 60 0 4 588 276 30 0 0 chr3R 503793 503826 -27401227 + (TAAAA)n Simple_repeat Simple_repeat 1 33 0 4 588 210 71 0 0 chr3R 505248 505276 -27399777 + (TATATG)n Simple_repeat Simple_repeat 5 32 0 4 588 37 23 0 0 chr3R 506119 506163 -27398890 + AT_rich Low_complexity Low_complexity 1 44 0 4 588 665 155 7 44 chr3R 506198 506333 -27398720 + DNAREP1_DM LINE Penelope 3 132 -462 4 588 14556 26 19 1 chr3R 508953 510657 -27394396 - S_DM DNA Tc1 0 1736 1 4 588 540 191 0 0 chr3R 516383 516477 -27388576 - DNAREP1_DM LINE Penelope -1 593 500 4 588 561 221 146 50 chr3R 516489 516708 -27388345 - DNAREP1_DM LINE Penelope -155 439 200 4 588 403 197 0 0 chr3R 516773 516844 -27388209 - DNAREP1_DM LINE Penelope -523 71 1 4 588 22 0 0 0 chr3R 517124 517146 -27387907 + AT_rich Low_complexity Low_complexity 1 22 0 4 588 351 148 0 0 chr3R 518200 518254 -27386799 + DNAREP1_DM LINE Penelope 1 54 -540 4 588 21 0 0 0 chr3R 518348 518369 -27386684 + AT_rich Low_complexity Low_complexity 1 21 0 4 588 26 0 0 0 chr3R 518424 518450 -27386603 + AT_rich Low_complexity Low_complexity 1 26 0 4 588 21 0 0 0 chr3R 519397 519418 -27385635 + AT_rich Low_complexity Low_complexity 1 21 0 4 588 272 139 0 0 chr3R 521068 521111 -27383942 + DNAREP1_DM LINE Penelope 552 594 0 4 588 27 62 0 0 chr3R 521233 521281 -27383772 + AT_rich Low_complexity Low_complexity 1 48 0 4 588 200 294 0 0 chr3R 523900 523968 -27381085 + GA-rich Low_complexity Low_complexity 3 70 0 4 589 33 43 0 0 chr3R 532557 532604 -27372449 + AT_rich Low_complexity Low_complexity 1 47 0 4 589 221 254 0 40 chr3R 535933 536007 -27369046 + (CAG)n Simple_repeat Simple_repeat 3 73 0 4 589 22 0 0 0 chr3R 538077 538099 -27366954 + AT_rich Low_complexity Low_complexity 1 22 0 4 589 394 43 0 0 chr3R 538099 538145 -27366908 - BS2 LINE Jockey -2 4719 4674 4 589 652 150 71 57 chr3R 538188 538329 -27366724 - DNAREP1_DM LINE Penelope -110 484 342 4 589 9676 107 7 1 chr3R 540356 541738 -27363315 + S_DM DNA Tc1 346 1736 0 4 589 371 263 60 0 chr3R 541739 541894 -27363159 + Gypsy_I LTR Gypsy 1797 1968 -4453 4 589 495 326 78 39 chr3R 541895 542217 -27362836 + GTWIN_I LTR Gypsy 2112 2599 -4923 4 589 513 299 101 5 chr3R 542246 542434 -27362619 + GTWIN_I LTR Gypsy 2486 2691 -3730 4 589 766 268 72 15 chr3R 542435 542700 -27362353 + Gypsy_I LTR Gypsy 2901 3180 -3327 4 589 1206 279 79 27 chr3R 542728 543173 -27361880 + Gypsy_I LTR Gypsy 3378 3845 -2662 4 589 243 215 13 0 chr3R 543263 543342 -27361711 + Gypsy6_I LTR Gypsy 4353 4478 -3044 4 589 451 281 75 0 chr3R 543346 543492 -27361561 + GTWIN_I LTR Gypsy 4103 4259 -2162 4 589 1852 135 103 30 chr3R 543502 543869 -27361184 + Gypsy12A_LTR LTR Gypsy 2 395 -1885 4 589 1032 169 97 30 chr3R 543917 544215 -27360838 + Gypsy12A_LTR LTR Gypsy 728 1045 -1235 4 589 3142 114 14 18 chr3R 544253 544743 -27360310 + Gypsy12A_LTR LTR Gypsy 1793 2280 0 4 589 345 204 11 21 chr3R 544793 544888 -27360165 + Gypsy_DS LTR Gypsy 6824 6917 -605 4 589 23 92 0 0 chr3R 545219 545284 -27359769 + AT_rich Low_complexity Low_complexity 1 65 0 4 589 21 0 0 0 chr3R 547575 547596 -27357457 + AT_rich Low_complexity Low_complexity 1 21 0 4 589 510 240 38 15 chr3R 547703 547914 -27357139 + DNAREP1_DM LINE Penelope 86 315 -279 4 589 24 32 0 0 chr3R 558736 558767 -27346286 + AT_rich Low_complexity Low_complexity 1 31 0 4 589 33 56 0 0 chr3R 558840 558894 -27346159 + AT_rich Low_complexity Low_complexity 1 54 0 4 589 213 154 0 0 chr3R 559092 559131 -27345922 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 589 2919 89 165 16 chr3R 561822 562339 -27342714 - DNAREP1_DM LINE Penelope 0 594 1 4 589 31 58 0 0 chr3R 562519 562571 -27342482 + AT_rich Low_complexity Low_complexity 1 52 0 4 589 21 82 0 0 chr3R 563640 563689 -27341364 + AT_rich Low_complexity Low_complexity 1 49 0 4 589 243 164 137 0 chr3R 565711 565784 -27339269 + DNAREP1_DM LINE Penelope 221 303 -291 4 589 226 162 45 227 chr3R 566900 566988 -27338065 - DNAREP1_DM LINE Penelope -180 414 343 4 589 35 41 0 0 chr3R 569941 569990 -27335063 + AT_rich Low_complexity Low_complexity 1 49 0 4 589 198 0 0 0 chr3R 571992 572014 -27333039 + (T)n Simple_repeat Simple_repeat 1 22 0 4 589 821 208 176 92 chr3R 575708 576078 -27328975 - DNAREP1_DM LINE Penelope -102 492 92 4 589 10175 3 0 0 chr3R 579025 580128 -27324925 + FW_DM LINE Jockey 1 1103 -3589 4 589 28664 2 0 1 chr3R 580129 583255 -27321798 + FW_DM LINE Jockey 1570 4692 0 4 589 224 220 0 0 chr3R 583889 583939 -27321114 + (TTG)n Simple_repeat Simple_repeat 1 50 0 4 589 12532 16 2 0 chr3R 585499 586929 -27318124 + M4DM DNA Transib 2 1434 -1 4 589 198 174 0 0 chr3R 587242 587288 -27317765 + T-rich Low_complexity Low_complexity 1 46 0 4 589 34 24 0 0 chr3R 588124 588165 -27316888 + AT_rich Low_complexity Low_complexity 1 41 0 4 589 237 185 0 0 chr3R 593707 593772 -27311281 + (CAT)n Simple_repeat Simple_repeat 3 67 0 4 589 38 0 0 0 chr3R 594301 594339 -27310714 + AT_rich Low_complexity Low_complexity 1 38 0 4 589 192 40 0 0 chr3R 597178 597203 -27307850 + (CATTT)n Simple_repeat Simple_repeat 3 27 0 4 589 25 31 0 0 chr3R 606524 606556 -27298497 + AT_rich Low_complexity Low_complexity 1 32 0 4 589 22 0 0 0 chr3R 606965 606987 -27298066 + AT_rich Low_complexity Low_complexity 1 22 0 4 589 435 198 77 9 chr3R 607790 607910 -27297143 + DNAREP1_DM LINE Penelope 399 489 -105 4 589 21 0 0 0 chr3R 611110 611131 -27293922 + AT_rich Low_complexity Low_complexity 1 21 0 4 589 686 74 123 62 chr3R 611223 611353 -27293700 - G5_DM LINE Jockey -52 4804 4667 4 589 325 230 0 0 chr3R 611799 611873 -27293180 + DNAREP1_DM LINE Penelope 411 484 -110 4 589 221 193 18 0 chr3R 612227 612284 -27292769 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 589 495 0 0 0 chr3R 612457 612512 -27292541 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 589 29 47 0 0 chr3R 613272 613315 -27291738 + AT_rich Low_complexity Low_complexity 1 43 0 4 589 180 111 0 0 chr3R 619014 619041 -27286012 + (TTA)n Simple_repeat Simple_repeat 2 28 0 4 589 221 152 0 61 chr3R 620579 620628 -27284425 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 589 317 175 36 48 chr3R 620999 621083 -27283970 + DNAREP1_DM LINE Penelope 431 513 -81 4 589 27 0 0 0 chr3R 621164 621191 -27283862 + AT_rich Low_complexity Low_complexity 1 27 0 4 589 354 194 0 80 chr3R 622324 622436 -27282617 - ROO_I LTR Pao -7513 743 641 4 589 248 91 23 0 chr3R 622551 622595 -27282458 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 589 232 270 0 0 chr3R 622851 622925 -27282128 + (CTG)n Simple_repeat Simple_repeat 1 74 0 4 589 216 97 0 0 chr3R 622965 622996 -27282057 + (CTG)n Simple_repeat Simple_repeat 1 31 0 4 589 269 266 0 0 chr3R 623050 623129 -27281924 + (TTG)n Simple_repeat Simple_repeat 1 79 0 4 589 330 87 0 0 chr3R 623476 623522 -27281531 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 589 243 175 0 0 chr3R 625593 625650 -27279403 + CT-rich Low_complexity Low_complexity 3 59 0 4 589 900 59 0 0 chr3R 627851 627970 -27277083 + (CA)n Simple_repeat Simple_repeat 1 119 0 4 589 330 80 0 0 chr3R 629676 629726 -27275327 + (A)n Simple_repeat Simple_repeat 1 50 0 4 589 39 22 0 0 chr3R 631223 631269 -27273784 + AT_rich Low_complexity Low_complexity 1 46 0 4 589 231 182 18 35 chr3R 632868 632925 -27272128 + (TATG)n Simple_repeat Simple_repeat 2 57 0 4 589 21 0 0 0 chr3R 633005 633026 -27272027 + AT_rich Low_complexity Low_complexity 1 21 0 4 589 21 82 0 0 chr3R 637949 637998 -27267055 + AT_rich Low_complexity Low_complexity 1 49 0 4 589 25 0 0 0 chr3R 638955 638980 -27266073 + AT_rich Low_complexity Low_complexity 1 25 0 4 589 216 0 0 0 chr3R 640814 640838 -27264215 + (CTTA)n Simple_repeat Simple_repeat 1 24 0 4 589 22 35 0 0 chr3R 648745 648774 -27256279 + AT_rich Low_complexity Low_complexity 1 29 0 4 589 194 62 31 0 chr3R 649932 649964 -27255089 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 589 342 130 0 0 chr3R 651668 651722 -27253331 - DNAREP1_DM LINE Penelope -104 490 437 4 589 576 159 35 17 chr3R 654486 654601 -27250452 + DMRP1 Unknown Unknown 14 130 -216 4 590 1058 114 114 41 chr3R 657163 657383 -27247670 - DNAREP1_DM LINE Penelope -357 237 2 4 590 8359 43 11 3 chr3R 657599 658606 -27246447 - TC1_DM DNA Tc1 0 1666 652 4 590 798 38 9 0 chr3R 658627 658733 -27246320 - TC1_DM DNA Tc1 -1559 107 1 4 590 348 208 0 0 chr3R 664028 664100 -27240953 - DNAREP1_DM LINE Penelope -160 434 363 4 590 208 283 0 0 chr3R 664606 664659 -27240394 + (TTGGGG)n Simple_repeat Simple_repeat 6 58 0 4 590 293 270 0 0 chr3R 665014 665103 -27239950 - DNAREP1_DM LINE Penelope -1 593 505 4 590 200 206 0 0 chr3R 667073 667107 -27237946 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 4 590 35 0 0 0 chr3R 668219 668254 -27236799 + AT_rich Low_complexity Low_complexity 1 35 0 4 590 460 246 69 0 chr3R 669929 670059 -27234994 + DNAREP1_DM LINE Penelope 390 528 -66 4 590 938 143 107 6 chr3R 670028 670197 -27234856 - DNAREP1_DM LINE Penelope -48 546 361 4 590 24 32 0 0 chr3R 670208 670239 -27234814 + AT_rich Low_complexity Low_complexity 1 31 0 4 590 288 228 0 0 chr3R 670245 670302 -27234751 - DNAREP1_DM LINE Penelope -537 57 1 4 590 258 309 0 0 chr3R 673522 673603 -27231450 + (CCCCAG)n Simple_repeat Simple_repeat 2 82 0 4 590 332 183 0 63 chr3R 678899 679010 -27226043 + ROO_I LTR Pao 639 742 -7514 4 590 213 132 0 0 chr3R 682825 682863 -27222190 + (CACTC)n Simple_repeat Simple_repeat 4 41 0 4 590 198 103 0 0 chr3R 687072 687101 -27217952 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 590 22 35 0 0 chr3R 689069 689098 -27215955 + AT_rich Low_complexity Low_complexity 1 29 0 4 590 214 293 0 0 chr3R 689551 689626 -27215427 + (CAAA)n Simple_repeat Simple_repeat 1 75 0 4 590 180 111 0 0 chr3R 690969 690996 -27214057 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4 590 417 20 0 0 chr3R 693614 693664 -27211389 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 590 411 130 0 0 chr3R 694461 694538 -27210515 + (CAG)n Simple_repeat Simple_repeat 3 79 0 4 590 180 77 0 0 chr3R 694639 694665 -27210388 + (CCA)n Simple_repeat Simple_repeat 1 26 0 4 590 216 119 0 45 chr3R 700189 700233 -27204820 + (CAGC)n Simple_repeat Simple_repeat 2 43 0 4 590 180 77 0 0 chr3R 705941 705967 -27199086 + (CGAT)n Simple_repeat Simple_repeat 1 26 0 4 590 205 167 0 0 chr3R 707475 707511 -27197542 + (GATTG)n Simple_repeat Simple_repeat 3 38 0 4 590 23 0 0 0 chr3R 708016 708039 -27197014 + AT_rich Low_complexity Low_complexity 1 23 0 4 590 3363 0 0 0 chr3R 713255 713622 -27191431 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 590 58750 0 0 0 chr3R 713622 720208 -27184845 + ROVER-I_DM LTR Gypsy 1 6584 0 4 590 3363 0 0 0 chr3R 720208 720575 -27184478 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 590 21 100 0 0 chr3R 720935 721005 -27184048 + AT_rich Low_complexity Low_complexity 1 70 0 4 590 216 135 0 0 chr3R 727162 727199 -27177854 + (ACTG)n Simple_repeat Simple_repeat 1 37 0 4 590 228 35 0 0 chr3R 729641 729670 -27175383 + (ATTTG)n Simple_repeat Simple_repeat 3 31 0 4 590 21 0 0 0 chr3R 730264 730285 -27174768 + AT_rich Low_complexity Low_complexity 1 21 0 4 590 1020 65 231 17 chr3R 730286 730459 -27174594 + DNAREP1_DM LINE Penelope 340 549 -45 4 590 991 124 153 47 chr3R 731019 731273 -27173780 + DNAREP1_DM LINE Penelope 1 281 -313 4 590 271 163 0 0 chr3R 731294 731337 -27173716 + DNAREP1_DM LINE Penelope 552 594 0 4 590 251 172 16 79 chr3R 731337 731357 -27173696 - P_DG DNA P -90 2798 2740 4 590 27 49 0 0 chr3R 731565 731606 -27173447 + AT_rich Low_complexity Low_complexity 1 41 0 4 590 22 0 0 0 chr3R 732404 732426 -27172627 + AT_rich Low_complexity Low_complexity 1 22 0 4 590 42 57 0 0 chr3R 736097 736167 -27168886 + AT_rich Low_complexity Low_complexity 1 70 0 4 590 211 196 35 18 chr3R 736757 736814 -27168239 + (CGAG)n Simple_repeat Simple_repeat 1 58 0 4 590 26 50 0 0 chr3R 752175 752215 -27152838 + AT_rich Low_complexity Low_complexity 1 40 0 4 590 233 72 0 67 chr3R 752734 752779 -27152274 + (GGA)n Simple_repeat Simple_repeat 1 42 0 4 590 343 244 128 16 chr3R 765386 765511 -27139542 - DNAREP1_DM LINE Penelope -23 571 433 4 590 22 111 0 0 chr3R 765997 766096 -27138957 + AT_rich Low_complexity Low_complexity 1 99 0 4 590 183 139 0 0 chr3R 768117 768153 -27136900 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 590 319 198 118 21 chr3R 768587 768680 -27136373 - DNAREP1_DM LINE Penelope -50 544 443 4 590 58 15 0 0 chr3R 768951 769016 -27136037 + AT_rich Low_complexity Low_complexity 1 65 0 4 590 22 103 0 0 chr3R 770219 770297 -27134756 + AT_rich Low_complexity Low_complexity 1 78 0 4 590 272 236 11 0 chr3R 770539 770628 -27134425 - DNAREP1_DM LINE Penelope -279 315 226 4 590 21 0 0 0 chr3R 771227 771248 -27133805 + AT_rich Low_complexity Low_complexity 1 21 0 4 590 568 204 301 0 chr3R 771348 771544 -27133509 - MARINA DNA Mariner -276 991 737 4 590 1602 92 92 8 chr3R 773243 773483 -27131570 + DNAREP1_DM LINE Penelope 202 461 -133 4 590 21 36 0 0 chr3R 775507 775535 -27129518 + AT_rich Low_complexity Low_complexity 1 28 0 4 590 243 191 0 0 chr3R 777333 777380 -27127673 - DNAREP1_DM LINE Penelope -511 83 37 4 590 234 121 0 0 chr3R 779135 779168 -27125885 - DNAREP1_DM LINE Penelope -538 56 24 4 590 225 65 0 0 chr3R 781164 781195 -27123858 + (GA)n Simple_repeat Simple_repeat 1 31 0 4 590 226 222 0 0 chr3R 784983 785028 -27120025 + (ACTG)n Simple_repeat Simple_repeat 1 45 0 4 590 21 0 0 0 chr3R 785199 785220 -27119833 + AT_rich Low_complexity Low_complexity 1 21 0 4 591 297 51 0 0 chr3R 787753 787792 -27117261 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 4 591 24 0 0 0 chr3R 788324 788348 -27116705 + AT_rich Low_complexity Low_complexity 1 24 0 4 591 240 122 0 0 chr3R 790983 791024 -27114029 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 591 34 0 0 0 chr3R 794736 794770 -27110283 + AT_rich Low_complexity Low_complexity 1 34 0 4 591 24 32 0 0 chr3R 794788 794819 -27110234 + AT_rich Low_complexity Low_complexity 1 31 0 4 591 39 0 0 0 chr3R 796040 796079 -27108974 + AT_rich Low_complexity Low_complexity 1 39 0 4 591 23 0 0 0 chr3R 796112 796135 -27108918 + AT_rich Low_complexity Low_complexity 1 23 0 4 591 32 101 0 0 chr3R 798267 798376 -27106677 + AT_rich Low_complexity Low_complexity 1 109 0 4 591 228 241 126 92 chr3R 798686 798805 -27106248 - LINEJ1_DM LINE Jockey -4202 818 696 4 591 939 201 87 102 chr3R 800511 800863 -27104190 + DNAREP1_DM LINE Penelope 1 430 -164 4 591 180 77 0 0 chr3R 800863 800889 -27104164 + (CGGA)n Simple_repeat Simple_repeat 4 29 0 4 591 939 205 102 104 chr3R 800889 801023 -27104030 + DNAREP1_DM LINE Penelope 431 594 0 4 591 625 234 115 65 chr3R 804646 804907 -27100146 - DNAREP1_DM LINE Penelope 0 594 321 4 591 23 0 0 0 chr3R 806595 806618 -27098435 + AT_rich Low_complexity Low_complexity 1 23 0 4 591 214 147 0 0 chr3R 810588 810622 -27094431 + (GCCTG)n Simple_repeat Simple_repeat 3 36 0 4 591 221 347 8 8 chr3R 811150 811269 -27093784 + (TCTG)n Simple_repeat Simple_repeat 1 119 0 4 591 293 282 0 12 chr3R 811176 811262 -27093791 + (TCCG)n Simple_repeat Simple_repeat 4 88 0 4 591 23 68 0 0 chr3R 811321 811365 -27093688 + AT_rich Low_complexity Low_complexity 1 44 0 4 591 200 312 0 0 chr3R 811612 811660 -27093393 + (CCCGAA)n Simple_repeat Simple_repeat 1 48 0 4 591 25 0 0 0 chr3R 811918 811943 -27093110 + AT_rich Low_complexity Low_complexity 1 25 0 4 591 186 71 0 0 chr3R 822142 822170 -27082883 + (A)n Simple_repeat Simple_repeat 1 28 0 4 591 21 0 0 0 chr3R 823976 823997 -27081056 + AT_rich Low_complexity Low_complexity 1 21 0 4 591 258 236 0 53 chr3R 824697 824773 -27080280 + (CGGA)n Simple_repeat Simple_repeat 3 74 0 4 591 21 36 0 0 chr3R 827047 827075 -27077978 + AT_rich Low_complexity Low_complexity 1 28 0 4 591 26 0 0 0 chr3R 828083 828109 -27076944 + AT_rich Low_complexity Low_complexity 1 26 0 4 591 4571 10 0 0 chr3R 828109 828616 -27076437 - DM176_LTR LTR Gypsy 0 507 1 4 591 6552 0 0 0 chr3R 828616 829374 -27075679 - DM176_I LTR Gypsy 0 6420 5663 4 591 40943 3 1 10 chr3R 829368 834349 -27070704 - DM176_I LTR Gypsy -1484 4936 1 4 591 4551 10 0 0 chr3R 834349 834856 -27070197 - DM176_LTR LTR Gypsy 0 507 1 4 591 250 96 68 0 chr3R 834857 834930 -27070123 + (TA)n Simple_repeat Simple_repeat 1 78 0 4 591 258 186 14 28 chr3R 837693 837765 -27067288 + ROO_I LTR Pao 668 738 -7518 4 591 30 27 0 0 chr3R 839244 839281 -27065772 + AT_rich Low_complexity Low_complexity 1 37 0 4 591 24 0 0 0 chr3R 841098 841122 -27063931 + AT_rich Low_complexity Low_complexity 1 24 0 4 591 221 167 0 18 chr3R 843177 843232 -27061821 + (TTG)n Simple_repeat Simple_repeat 1 54 0 4 591 234 91 0 0 chr3R 844775 844808 -27060245 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 4 591 182 160 0 20 chr3R 844972 845023 -27060030 + T-rich Low_complexity Low_complexity 4 53 0 4 591 335 23 0 22 chr3R 845318 845363 -27059690 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 591 207 100 0 0 chr3R 847308 847338 -27057715 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 591 229 179 54 0 chr3R 847544 847600 -27057453 + G-rich Low_complexity Low_complexity 6 64 0 4 591 23 33 0 0 chr3R 848030 848060 -27056993 + AT_rich Low_complexity Low_complexity 1 30 0 4 591 195 42 0 0 chr3R 850846 850870 -27054183 + (CAAAAA)n Simple_repeat Simple_repeat 6 29 0 4 591 206 245 0 0 chr3R 853484 853533 -27051520 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 4 591 183 42 0 0 chr3R 857136 857160 -27047893 + (CCTAT)n Simple_repeat Simple_repeat 3 26 0 4 591 180 0 0 0 chr3R 857298 857318 -27047735 + (AAGTG)n Simple_repeat Simple_repeat 2 21 0 4 591 261 226 16 0 chr3R 861568 861630 -27043423 + (TTCGGG)n Simple_repeat Simple_repeat 4 66 0 4 591 240 35 0 0 chr3R 864919 864948 -27040105 + (CGGA)n Simple_repeat Simple_repeat 3 31 0 4 591 2474 8 0 0 chr3R 871621 871887 -27033166 + DMLTR5 LTR Gypsy 1 266 0 4 591 7084 1 0 2 chr3R 871886 872682 -27032371 + HMSBEAGLE_I LTR Gypsy 1 796 -5733 4 591 953 35 52 12 chr3R 872682 872854 -27032199 + (TTA)n Simple_repeat Simple_repeat 1 179 0 4 591 51505 0 3 0 chr3R 872854 878400 -27026653 + HMSBEAGLE_I LTR Gypsy 969 6529 0 4 591 2474 8 0 0 chr3R 878400 878666 -27026387 + DMLTR5 LTR Gypsy 1 266 0 4 591 21 36 0 0 chr3R 878822 878850 -27026203 + AT_rich Low_complexity Low_complexity 1 28 0 4 591 211 158 26 0 chr3R 880887 880925 -27024128 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 591 23 0 0 0 chr3R 881006 881029 -27024024 + AT_rich Low_complexity Low_complexity 1 23 0 4 591 249 210 0 0 chr3R 883031 883093 -27021960 + (CGGA)n Simple_repeat Simple_repeat 3 64 0 4 591 36 0 0 0 chr3R 889652 889688 -27015365 + AT_rich Low_complexity Low_complexity 1 36 0 4 591 2448 4 0 0 chr3R 893757 894024 -27011029 - MDG3_LTR LTR Gypsy 0 267 1 4 591 44830 1 12 0 chr3R 894024 898951 -27006102 - MDG3_I LTR Gypsy 0 4986 1 4 591 2448 4 0 0 chr3R 898950 899217 -27005836 - MDG3_LTR LTR Gypsy 0 267 1 4 591 264 77 0 0 chr3R 901727 901766 -27003287 + (TAA)n Simple_repeat Simple_repeat 3 41 0 4 591 36 0 0 0 chr3R 905737 905773 -26999280 + AT_rich Low_complexity Low_complexity 1 36 0 4 591 249 57 0 0 chr3R 906309 906344 -26998709 + (GAGTG)n Simple_repeat Simple_repeat 2 36 0 4 591 216 0 0 0 chr3R 907270 907294 -26997759 + (A)n Simple_repeat Simple_repeat 1 24 0 4 591 276 188 0 0 chr3R 909570 909634 -26995419 + (TTG)n Simple_repeat Simple_repeat 2 65 0 4 591 33 25 0 0 chr3R 909682 909722 -26995331 + AT_rich Low_complexity Low_complexity 1 40 0 4 591 247 245 0 0 chr3R 910040 910093 -26994960 + (CTG)n Simple_repeat Simple_repeat 3 55 0 4 591 201 121 0 0 chr3R 910515 910548 -26994505 + (CTG)n Simple_repeat Simple_repeat 3 35 0 4 591 288 53 0 0 chr3R 910857 910895 -26994158 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 591 230 206 0 0 chr3R 910953 911021 -26994032 - ROO_I LTR Pao -7542 714 647 4 591 292 128 22 44 chr3R 911343 911433 -26993620 - ROO_I LTR Pao -7531 725 638 4 591 213 132 0 0 chr3R 911529 911567 -26993486 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 591 276 147 13 13 chr3R 911595 911671 -26993382 - ROO_I LTR Pao -7530 726 651 4 591 244 260 14 0 chr3R 917039 917112 -26987941 + (CAG)n Simple_repeat Simple_repeat 1 74 0 4 592 25 31 0 0 chr3R 919770 919802 -26985251 + AT_rich Low_complexity Low_complexity 1 32 0 4 592 218 148 0 18 chr3R 921089 921144 -26983909 + (CGAAT)n Simple_repeat Simple_repeat 2 55 0 4 592 29 0 0 0 chr3R 922706 922735 -26982318 + AT_rich Low_complexity Low_complexity 1 29 0 4 592 189 224 0 0 chr3R 927551 927609 -26977444 + (ACTG)n Simple_repeat Simple_repeat 1 58 0 4 592 30 45 0 0 chr3R 930975 931019 -26974034 + AT_rich Low_complexity Low_complexity 1 44 0 4 592 494 253 91 29 chr3R 931772 931947 -26973106 - DNAREP1_DM LINE Penelope -46 548 363 4 592 352 157 0 0 chr3R 931960 932011 -26973042 - DNAREP1_DM LINE Penelope -532 62 12 4 592 184 54 53 26 chr3R 933350 933388 -26971665 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 592 222 164 0 0 chr3R 935582 935637 -26969416 + (GGTTG)n Simple_repeat Simple_repeat 4 58 0 4 592 36 0 0 0 chr3R 936154 936190 -26968863 + AT_rich Low_complexity Low_complexity 1 36 0 4 592 198 136 0 0 chr3R 938595 938639 -26966414 + (CCCA)n Simple_repeat Simple_repeat 1 44 0 4 592 23 33 0 0 chr3R 940947 940977 -26964076 + AT_rich Low_complexity Low_complexity 1 30 0 4 592 29 0 0 0 chr3R 950445 950474 -26954579 + AT_rich Low_complexity Low_complexity 1 29 0 4 592 22 35 0 0 chr3R 951313 951342 -26953711 + AT_rich Low_complexity Low_complexity 1 29 0 4 592 379 181 117 0 chr3R 952444 952538 -26952515 + DNAREP1_DM LINE Penelope 488 592 -2 4 592 70 48 0 0 chr3R 952578 952683 -26952370 + AT_rich Low_complexity Low_complexity 1 105 0 4 592 238 222 74 0 chr3R 957452 957506 -26947547 + DNAREP1_DM LINE Penelope 1 58 -536 4 592 288 77 0 0 chr3R 959155 959194 -26945859 + (CACTT)n Simple_repeat Simple_repeat 1 39 0 4 592 205 250 0 0 chr3R 959294 959346 -26945707 + (GTGTG)n Simple_repeat Simple_repeat 3 54 0 4 592 207 114 0 0 chr3R 959906 959941 -26945112 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 592 220 204 0 0 chr3R 961597 961646 -26943407 + (CAGAA)n Simple_repeat Simple_repeat 2 50 0 4 592 296 224 73 27 chr3R 962518 962628 -26942425 + DNAREP1_DM LINE Penelope 426 540 -54 4 592 21 0 0 0 chr3R 964721 964742 -26940311 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 710 11 0 0 chr3R 964745 964834 -26940219 + G4_DM LINE Jockey 3768 3856 0 4 592 22 0 0 0 chr3R 964837 964859 -26940194 + AT_rich Low_complexity Low_complexity 1 22 0 4 592 231 157 0 0 chr3R 966154 966205 -26938848 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 592 212 175 0 0 chr3R 968277 968317 -26936736 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 4 592 27 29 0 0 chr3R 969857 969891 -26935162 + AT_rich Low_complexity Low_complexity 1 34 0 4 592 24 0 0 0 chr3R 970249 970273 -26934780 + AT_rich Low_complexity Low_complexity 1 24 0 4 592 270 192 0 0 chr3R 974920 974972 -26930081 + DNAREP1_DM LINE Penelope 543 594 0 4 592 1620 18 0 16 chr3R 975240 975817 -26929236 + (TTTA)n Simple_repeat Simple_repeat 1 567 0 4 592 346 96 101 6 chr3R 975814 975972 -26929081 + (TTA)n Simple_repeat Simple_repeat 2 174 0 4 592 892 86 13 35 chr3R 975972 976199 -26928854 + (TTTA)n Simple_repeat Simple_repeat 1 222 0 4 592 22 0 0 0 chr3R 979975 979997 -26925056 + AT_rich Low_complexity Low_complexity 1 22 0 4 592 210 91 0 0 chr3R 981502 981535 -26923518 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 592 30 0 0 0 chr3R 984854 984884 -26920169 + AT_rich Low_complexity Low_complexity 1 30 0 4 592 21 36 0 0 chr3R 987612 987640 -26917413 + AT_rich Low_complexity Low_complexity 1 28 0 4 592 237 146 0 0 chr3R 988427 988475 -26916578 + (GGTTG)n Simple_repeat Simple_repeat 3 50 0 4 592 13769 34 20 0 chr3R 993299 994932 -26910121 + TC1_DM DNA Tc1 1 1666 0 4 592 273 217 542 0 chr3R 994971 995078 -26909975 + DNAREP1_DM LINE Penelope 429 593 -1 4 592 203 0 37 0 chr3R 998001 998028 -26907025 + (TAGA)n Simple_repeat Simple_repeat 2 29 0 4 592 32 43 0 0 chr3R 998063 998109 -26906944 + AT_rich Low_complexity Low_complexity 1 46 0 4 592 27 35 0 50 chr3R 998369 998429 -26906624 + AT_rich Low_complexity Low_complexity 1 57 0 4 592 288 167 0 0 chr3R 1001348 1001408 -26903645 - ROO_I LTR Pao -7532 724 665 4 592 273 141 14 72 chr3R 1001540 1001609 -26903444 - TART_B1 LINE telomeric -10458 196 132 4 592 198 150 0 0 chr3R 1001692 1001732 -26903321 + (CTG)n Simple_repeat Simple_repeat 1 40 0 4 592 261 119 0 0 chr3R 1001781 1001823 -26903230 + (CTG)n Simple_repeat Simple_repeat 3 44 0 4 592 240 200 0 0 chr3R 1001892 1001952 -26903101 + (CTG)n Simple_repeat Simple_repeat 3 62 0 4 592 40 0 0 0 chr3R 1002905 1002945 -26902108 + AT_rich Low_complexity Low_complexity 1 40 0 4 592 21 0 0 0 chr3R 1008018 1008039 -26897014 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 251 140 0 20 chr3R 1014093 1014144 -26890909 + (ACTG)n Simple_repeat Simple_repeat 4 53 0 4 592 495 0 0 0 chr3R 1014427 1014482 -26890571 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 592 211 200 25 0 chr3R 1015906 1015946 -26889107 + (CCCA)n Simple_repeat Simple_repeat 2 42 0 4 592 210 128 0 0 chr3R 1018304 1018343 -26886710 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 592 188 111 28 0 chr3R 1019917 1019953 -26885100 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 4 592 23 33 0 0 chr3R 1021847 1021877 -26883176 + AT_rich Low_complexity Low_complexity 1 30 0 4 592 27 29 0 0 chr3R 1028318 1028352 -26876701 + AT_rich Low_complexity Low_complexity 1 34 0 4 592 370 198 164 43 chr3R 1031972 1032088 -26872965 - DNAREP1_DM LINE Penelope -19 575 446 4 592 306 244 37 82 chr3R 1032103 1032237 -26872816 - DNAREP1_DM LINE Penelope -461 133 6 4 592 224 222 0 0 chr3R 1037293 1037338 -26867715 + (CAGA)n Simple_repeat Simple_repeat 1 45 0 4 592 29 28 0 0 chr3R 1043354 1043390 -26861663 + AT_rich Low_complexity Low_complexity 1 36 0 4 592 220 224 0 0 chr3R 1043474 1043523 -26861530 + (TTTAA)n Simple_repeat Simple_repeat 5 53 0 4 593 28 29 0 0 chr3R 1051537 1051572 -26853481 + AT_rich Low_complexity Low_complexity 1 35 0 4 593 308 151 0 36 chr3R 1051594 1051649 -26853404 + DNAREP1_DM LINE Penelope 391 443 -151 4 593 471 194 0 21 chr3R 1051664 1051759 -26853294 + DNAREP1_DM LINE Penelope 500 592 -2 4 593 26 50 0 0 chr3R 1055065 1055105 -26849948 + AT_rich Low_complexity Low_complexity 1 40 0 4 593 183 42 0 0 chr3R 1057405 1057429 -26847624 + (A)n Simple_repeat Simple_repeat 1 24 0 4 593 243 270 0 0 chr3R 1064987 1065050 -26840003 + DNAREP1_DM LINE Penelope 117 179 -415 4 593 248 170 0 0 chr3R 1065062 1065109 -26839944 + DNAREP1_DM LINE Penelope 364 410 -184 4 593 228 111 0 0 chr3R 1067670 1067706 -26837347 + (CATCC)n Simple_repeat Simple_repeat 4 39 0 4 593 210 37 0 0 chr3R 1068983 1069010 -26836043 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 593 21 0 0 0 chr3R 1075599 1075620 -26829433 + AT_rich Low_complexity Low_complexity 1 21 0 4 593 1176 184 171 55 chr3R 1077955 1078370 -26826683 + DNAREP1_DM LINE Penelope 26 488 -106 4 593 22 70 0 0 chr3R 1081661 1081704 -26823349 + AT_rich Low_complexity Low_complexity 1 43 0 4 593 22 0 0 0 chr3R 1082433 1082455 -26822598 + AT_rich Low_complexity Low_complexity 1 22 0 4 593 185 154 0 25 chr3R 1083510 1083550 -26821503 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 593 12154 101 3 1 chr3R 1085095 1086824 -26818229 - S_DM DNA Tc1 0 1736 5 4 593 47 0 0 0 chr3R 1089454 1089501 -26815552 + AT_rich Low_complexity Low_complexity 1 47 0 4 593 23 0 0 0 chr3R 1094625 1094648 -26810405 + AT_rich Low_complexity Low_complexity 1 23 0 4 593 28 0 0 0 chr3R 1094737 1094765 -26810288 + AT_rich Low_complexity Low_complexity 1 28 0 4 593 948 142 164 40 chr3R 1095386 1095635 -26809418 + DMRP1 Unknown Unknown 2 281 -65 4 593 210 229 0 32 chr3R 1096200 1096263 -26808790 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 593 230 250 0 0 chr3R 1098277 1098329 -26806724 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 4 593 207 139 0 0 chr3R 1098461 1098497 -26806556 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 593 23 54 0 0 chr3R 1099328 1099365 -26805688 + AT_rich Low_complexity Low_complexity 1 37 0 4 593 180 77 0 0 chr3R 1101353 1101379 -26803674 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 593 22 0 0 0 chr3R 1107313 1107335 -26797718 + AT_rich Low_complexity Low_complexity 1 22 0 4 593 441 36 0 0 chr3R 1108737 1108792 -26796261 + (TC)n Simple_repeat Simple_repeat 1 55 0 4 593 249 33 0 0 chr3R 1113093 1113123 -26791930 + (CAG)n Simple_repeat Simple_repeat 3 32 0 4 593 21 0 0 0 chr3R 1117598 1117619 -26787434 + AT_rich Low_complexity Low_complexity 1 21 0 4 593 200 86 29 0 chr3R 1117980 1118015 -26787038 + (GAA)n Simple_repeat Simple_repeat 1 36 0 4 593 203 204 20 0 chr3R 1119248 1119297 -26785756 + (CAA)n Simple_repeat Simple_repeat 1 50 0 4 593 215 163 23 0 chr3R 1119539 1119582 -26785471 + (TTGTG)n Simple_repeat Simple_repeat 1 44 0 4 593 216 239 0 0 chr3R 1120410 1120456 -26784597 + (CGG)n Simple_repeat Simple_repeat 1 46 0 4 593 21 36 0 0 chr3R 1124680 1124708 -26780345 + AT_rich Low_complexity Low_complexity 1 28 0 4 593 243 224 0 17 chr3R 1127092 1127151 -26777902 - DNAREP1_DM LINE Penelope -11 583 526 4 593 214 179 0 0 chr3R 1128714 1128753 -26776300 + (CATA)n Simple_repeat Simple_repeat 1 39 0 4 593 207 176 0 0 chr3R 1133032 1133066 -26771987 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 4 593 23 33 0 0 chr3R 1133625 1133655 -26771398 + AT_rich Low_complexity Low_complexity 1 30 0 4 593 215 103 0 25 chr3R 1133946 1133986 -26771067 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 593 517 144 186 0 chr3R 1135639 1135736 -26769317 + DMRP1 Unknown Unknown 2 116 -230 4 593 798 133 0 133 chr3R 1135753 1135926 -26769127 + DMRP1 Unknown Unknown 197 346 0 4 593 180 77 0 0 chr3R 1137477 1137503 -26767550 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 4 593 240 59 0 0 chr3R 1137811 1137845 -26767208 + (TAA)n Simple_repeat Simple_repeat 2 35 0 4 593 180 152 0 0 chr3R 1140127 1140160 -26764893 + CT-rich Low_complexity Low_complexity 2 34 0 4 593 195 42 0 0 chr3R 1140905 1140929 -26764124 + (ATG)n Simple_repeat Simple_repeat 3 26 0 4 593 23 33 0 0 chr3R 1147701 1147731 -26757322 + AT_rich Low_complexity Low_complexity 1 30 0 4 593 24 32 0 0 chr3R 1149364 1149395 -26755658 + AT_rich Low_complexity Low_complexity 1 31 0 4 593 327 65 0 0 chr3R 1160303 1160349 -26744704 + (TGG)n Simple_repeat Simple_repeat 1 46 0 4 593 35383 3 0 0 chr3R 1164176 1169203 -26735850 - DMRT1B LINE R1 0 5183 156 4 593 254 272 12 12 chr3R 1174224 1174306 -26730747 - DNAREP1_DM LINE Penelope -512 82 1 4 593 204 229 0 0 chr3R 1175420 1175468 -26729585 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 593 22 0 0 0 chr3R 1175876 1175898 -26729155 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 24 32 0 0 chr3R 1184563 1184594 -26720459 + AT_rich Low_complexity Low_complexity 1 31 0 4 594 12625 58 21 4 chr3R 1191089 1192717 -26712336 - FB4_DM DNA Tc1 -1329 2760 1105 4 594 273 25 23 70 chr3R 1192684 1192727 -26712326 + FB4_DM DNA Tc1 2728 2768 -1321 4 594 27 62 0 0 chr3R 1194556 1194604 -26710449 + AT_rich Low_complexity Low_complexity 1 48 0 4 594 180 0 0 0 chr3R 1194999 1195019 -26710034 + (T)n Simple_repeat Simple_repeat 1 20 0 4 594 27 29 0 0 chr3R 1197239 1197273 -26707780 + AT_rich Low_complexity Low_complexity 1 34 0 4 594 421 194 82 0 chr3R 1200442 1200540 -26704513 - I_DM LINE I -760 5471 5366 4 594 207 218 18 0 chr3R 1201310 1201365 -26703688 + (CAG)n Simple_repeat Simple_repeat 2 57 0 4 594 23 68 0 0 chr3R 1202127 1202171 -26702882 + AT_rich Low_complexity Low_complexity 1 44 0 4 594 299 200 118 32 chr3R 1212379 1212472 -26692581 + DNAREP1_DM LINE Penelope 1 101 -493 4 594 24 0 0 0 chr3R 1215242 1215266 -26689787 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 22 56 0 0 chr3R 1216739 1216775 -26688278 + AT_rich Low_complexity Low_complexity 1 36 0 4 594 215 295 0 0 chr3R 1218447 1218508 -26686545 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 594 208 274 0 0 chr3R 1219963 1220025 -26685028 + (CGGAG)n Simple_repeat Simple_repeat 1 62 0 4 594 230 161 0 18 chr3R 1221928 1221985 -26683068 + ROO_I LTR Pao 641 696 -7560 4 594 21 0 0 0 chr3R 1222876 1222897 -26682156 + AT_rich Low_complexity Low_complexity 1 21 0 4 594 30 27 0 0 chr3R 1223051 1223088 -26681965 + AT_rich Low_complexity Low_complexity 1 37 0 4 594 23 54 0 0 chr3R 1229195 1229232 -26675821 + AT_rich Low_complexity Low_complexity 1 37 0 4 594 189 0 0 0 chr3R 1230383 1230404 -26674649 + (C)n Simple_repeat Simple_repeat 1 21 0 4 594 216 0 0 0 chr3R 1231827 1231851 -26673202 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4 594 29 0 0 0 chr3R 1237841 1237870 -26667183 + AT_rich Low_complexity Low_complexity 1 29 0 4 594 222 37 0 0 chr3R 1238092 1238119 -26666934 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 594 215 150 25 0 chr3R 1238471 1238511 -26666542 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 594 27 29 0 0 chr3R 1239864 1239898 -26665155 + AT_rich Low_complexity Low_complexity 1 34 0 4 594 183 100 0 0 chr3R 1240105 1240135 -26664918 + (CAGAG)n Simple_repeat Simple_repeat 4 33 0 4 594 180 0 0 0 chr3R 1240749 1240769 -26664284 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 594 352 102 0 55 chr3R 1242534 1242607 -26662446 + (CAG)n Simple_repeat Simple_repeat 3 71 0 4 594 21 0 0 0 chr3R 1243389 1243410 -26661643 + AT_rich Low_complexity Low_complexity 1 21 0 4 594 187 93 23 23 chr3R 1244952 1244996 -26660057 + (TATAA)n Simple_repeat Simple_repeat 1 44 0 4 594 469 214 147 65 chr3R 1246717 1246887 -26658166 - DNAREP1_DM LINE Penelope -136 458 275 4 594 24 0 0 0 chr3R 1247012 1247036 -26658017 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 258 140 0 20 chr3R 1250004 1250055 -26654998 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 594 214 205 0 0 chr3R 1259289 1259328 -26645725 + (TATG)n Simple_repeat Simple_repeat 1 39 0 4 594 23 0 0 0 chr3R 1265245 1265268 -26639785 + AT_rich Low_complexity Low_complexity 1 23 0 4 594 25 0 0 0 chr3R 1267785 1267810 -26637243 + AT_rich Low_complexity Low_complexity 1 25 0 4 594 22 0 0 0 chr3R 1268920 1268942 -26636111 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 4504 31 0 2 chr3R 1268950 1269491 -26635562 - G4_DM LINE Jockey 0 3856 3317 4 594 2477 7 0 4 chr3R 1271737 1272013 -26633040 + BURDOCK_LTR LTR Gypsy 1 275 0 4 594 54023 2 2 0 chr3R 1272013 1277863 -26627190 + BURDOCK_I LTR Gypsy 1 5860 0 4 594 2461 7 0 4 chr3R 1277864 1278140 -26626913 + BURDOCK_LTR LTR Gypsy 1 275 0 4 594 252 143 0 0 chr3R 1280223 1280265 -26624788 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 4 594 24 32 0 0 chr3R 1280794 1280825 -26624228 + AT_rich Low_complexity Low_complexity 1 31 0 4 594 255 31 0 0 chr3R 1282082 1282114 -26622939 + (CAAGT)n Simple_repeat Simple_repeat 4 35 0 4 594 23 78 0 0 chr3R 1296395 1296446 -26608607 + AT_rich Low_complexity Low_complexity 1 51 0 4 594 31 76 0 0 chr3R 1296479 1296545 -26608508 + AT_rich Low_complexity Low_complexity 1 66 0 4 594 222 200 46 0 chr3R 1304527 1304592 -26600461 + A-rich Low_complexity Low_complexity 1 68 0 4 594 462 36 0 0 chr3R 1305979 1306035 -26599018 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 594 30 0 0 0 chr3R 1309863 1309893 -26595160 + AT_rich Low_complexity Low_complexity 1 30 0 4 594 43 35 0 0 chr3R 1309912 1309969 -26595084 + AT_rich Low_complexity Low_complexity 1 57 0 4 595 33 73 0 0 chr3R 1311087 1311155 -26593898 + AT_rich Low_complexity Low_complexity 1 68 0 4 595 22 0 0 0 chr3R 1311177 1311199 -26593854 + AT_rich Low_complexity Low_complexity 1 22 0 4 595 286 208 101 44 chr3R 1314042 1314179 -26590874 - PENELOPE LINE Penelope -145 4016 3898 4 595 225 0 0 0 chr3R 1321014 1321039 -26584014 + (CATTT)n Simple_repeat Simple_repeat 1 25 0 4 595 23 0 0 0 chr3R 1321896 1321919 -26583134 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 22 0 0 0 chr3R 1327602 1327624 -26577429 + AT_rich Low_complexity Low_complexity 1 22 0 4 595 189 147 0 0 chr3R 1328290 1328324 -26576729 + (TTCGGG)n Simple_repeat Simple_repeat 3 36 0 4 595 29 47 0 0 chr3R 1329019 1329062 -26575991 + AT_rich Low_complexity Low_complexity 1 43 0 4 595 225 211 0 0 chr3R 1329816 1329873 -26575180 + (TTGG)n Simple_repeat Simple_repeat 3 59 0 4 595 29 78 0 0 chr3R 1330116 1330180 -26574873 + AT_rich Low_complexity Low_complexity 1 64 0 4 595 26 30 0 0 chr3R 1331040 1331073 -26573980 + AT_rich Low_complexity Low_complexity 1 33 0 4 595 1390 122 115 85 chr3R 1334072 1334402 -26570651 - DMRP1 Unknown Unknown -6 340 1 4 595 25 0 0 0 chr3R 1334449 1334474 -26570579 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 187 56 83 0 chr3R 1334710 1334746 -26570307 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 4 595 201 39 0 0 chr3R 1336854 1336880 -26568173 + (CATAT)n Simple_repeat Simple_repeat 1 26 0 4 595 192 135 0 0 chr3R 1336896 1336933 -26568120 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 595 25 0 0 0 chr3R 1338251 1338276 -26566777 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 28 48 0 0 chr3R 1339653 1339695 -26565358 + AT_rich Low_complexity Low_complexity 1 42 0 4 595 22 0 0 0 chr3R 1341250 1341272 -26563781 + AT_rich Low_complexity Low_complexity 1 22 0 4 595 454 210 48 14 chr3R 1344295 1344440 -26560613 - DNAREP1_DM LINE Penelope -241 353 204 4 595 237 108 0 0 chr3R 1344551 1344588 -26560465 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 595 21 36 0 0 chr3R 1345125 1345153 -26559900 + AT_rich Low_complexity Low_complexity 1 28 0 4 595 209 204 0 0 chr3R 1348653 1348697 -26556356 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 595 235 109 0 68 chr3R 1351838 1351897 -26553156 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 4 595 23 0 0 0 chr3R 1353135 1353158 -26551895 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 21 0 0 0 chr3R 1359409 1359430 -26545623 + AT_rich Low_complexity Low_complexity 1 21 0 4 595 26 0 0 0 chr3R 1364864 1364890 -26540163 + AT_rich Low_complexity Low_complexity 1 26 0 4 595 25 0 0 0 chr3R 1372516 1372541 -26532512 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 40 0 0 0 chr3R 1373764 1373804 -26531249 + AT_rich Low_complexity Low_complexity 1 40 0 4 595 27 73 0 0 chr3R 1373821 1373876 -26531177 + AT_rich Low_complexity Low_complexity 1 55 0 4 595 24 0 0 0 chr3R 1374062 1374086 -26530967 + AT_rich Low_complexity Low_complexity 1 24 0 4 595 22 35 0 0 chr3R 1375203 1375232 -26529821 + AT_rich Low_complexity Low_complexity 1 29 0 4 595 21 71 0 0 chr3R 1376591 1376633 -26528420 + AT_rich Low_complexity Low_complexity 1 42 0 4 595 214 29 0 54 chr3R 1377026 1377063 -26527990 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 595 542 195 243 17 chr3R 1377163 1377454 -26527599 + DNAREP1_DM LINE Penelope 3 342 -252 4 595 2427 104 123 162 chr3R 1377474 1378092 -26526961 + DNAREP1_DM LINE Penelope 1 594 0 4 595 379 0 37 110 chr3R 1378782 1378946 -26526107 + (TTA)n Simple_repeat Simple_repeat 1 152 0 4 595 43 20 0 0 chr3R 1380293 1380343 -26524710 + AT_rich Low_complexity Low_complexity 1 50 0 4 595 1861 54 91 14 chr3R 1380349 1380628 -26524425 - G5A_DM LINE Jockey 0 2841 2562 4 595 24 0 0 0 chr3R 1390465 1390489 -26514564 + AT_rich Low_complexity Low_complexity 1 24 0 4 595 26 0 0 0 chr3R 1402276 1402302 -26502751 + AT_rich Low_complexity Low_complexity 1 26 0 4 595 35 54 0 0 chr3R 1402415 1402471 -26502582 + AT_rich Low_complexity Low_complexity 1 56 0 4 595 23 68 0 0 chr3R 1404816 1404860 -26500193 + AT_rich Low_complexity Low_complexity 1 44 0 4 595 21 36 0 0 chr3R 1406031 1406059 -26498994 + AT_rich Low_complexity Low_complexity 1 28 0 4 595 205 261 0 0 chr3R 1408482 1408528 -26496525 + CT-rich Low_complexity Low_complexity 2 47 0 4 595 26 0 0 0 chr3R 1414443 1414469 -26490584 + AT_rich Low_complexity Low_complexity 1 26 0 4 595 200 86 0 28 chr3R 1425835 1425871 -26479182 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 595 23 0 0 0 chr3R 1432407 1432430 -26472623 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 180 176 0 0 chr3R 1432913 1432947 -26472106 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 595 23 33 0 0 chr3R 1432984 1433014 -26472039 + AT_rich Low_complexity Low_complexity 1 30 0 4 595 21 36 0 0 chr3R 1433071 1433099 -26471954 + AT_rich Low_complexity Low_complexity 1 28 0 4 595 23 0 0 0 chr3R 1433916 1433939 -26471114 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 242 351 0 19 chr3R 1434371 1434528 -26470525 + (CCG)n Simple_repeat Simple_repeat 3 156 0 4 595 219 69 0 0 chr3R 1436076 1436105 -26468948 + (CTG)n Simple_repeat Simple_repeat 3 31 0 4 595 181 75 50 0 chr3R 1438260 1438300 -26466753 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 595 255 415 0 0 chr3R 1441418 1441570 -26463483 + (CGG)n Simple_repeat Simple_repeat 2 153 0 4 596 21 0 0 0 chr3R 1442376 1442397 -26462656 + AT_rich Low_complexity Low_complexity 1 21 0 4 596 21 36 0 0 chr3R 1448756 1448784 -26456269 + AT_rich Low_complexity Low_complexity 1 28 0 4 596 189 0 0 0 chr3R 1452998 1453019 -26452034 + (TTA)n Simple_repeat Simple_repeat 1 21 0 4 596 195 129 0 0 chr3R 1459187 1459218 -26445835 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4 596 23 0 0 0 chr3R 1460220 1460243 -26444810 + AT_rich Low_complexity Low_complexity 1 23 0 4 596 212 192 12 60 chr3R 1462840 1462923 -26442130 + (TTATA)n Simple_repeat Simple_repeat 4 82 0 4 596 188 149 21 0 chr3R 1464528 1464575 -26440478 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 596 44 0 0 0 chr3R 1465719 1465763 -26439290 + AT_rich Low_complexity Low_complexity 1 44 0 4 596 219 227 0 0 chr3R 1469385 1469429 -26435624 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 596 249 175 16 16 chr3R 1469586 1469650 -26435403 + A-rich Low_complexity Low_complexity 1 64 0 4 596 28 29 0 0 chr3R 1470406 1470441 -26434612 + AT_rich Low_complexity Low_complexity 1 35 0 4 596 203 132 53 0 chr3R 1471794 1471832 -26433221 + (CACTC)n Simple_repeat Simple_repeat 3 42 0 4 596 252 212 14 43 chr3R 1474085 1474154 -26430899 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 596 26 0 0 0 chr3R 1474610 1474636 -26430417 + AT_rich Low_complexity Low_complexity 1 26 0 4 596 22 35 0 0 chr3R 1478574 1478603 -26426450 + AT_rich Low_complexity Low_complexity 1 29 0 4 596 194 100 0 70 chr3R 1483154 1483197 -26421856 + CT-rich Low_complexity Low_complexity 3 42 0 4 596 30 45 0 0 chr3R 1486041 1486085 -26418968 + AT_rich Low_complexity Low_complexity 1 44 0 4 596 24 32 0 0 chr3R 1486196 1486227 -26418826 + AT_rich Low_complexity Low_complexity 1 31 0 4 596 23 0 0 0 chr3R 1488318 1488341 -26416712 + AT_rich Low_complexity Low_complexity 1 23 0 4 596 207 340 11 11 chr3R 1490629 1490724 -26414329 + (CGG)n Simple_repeat Simple_repeat 3 97 0 4 596 24 0 0 0 chr3R 1495233 1495257 -26409796 + AT_rich Low_complexity Low_complexity 1 24 0 4 596 278 206 20 30 chr3R 1495601 1495701 -26409352 + ROO_I LTR Pao 637 735 -7521 4 596 25 0 0 0 chr3R 1498645 1498670 -26406383 + AT_rich Low_complexity Low_complexity 1 25 0 4 596 3404 100 100 18 chr3R 1502378 1502927 -26402126 - DNAREP1_DM LINE Penelope 0 594 1 4 596 201 373 0 0 chr3R 1503951 1504069 -26400984 + (CAG)n Simple_repeat Simple_repeat 1 118 0 4 596 22 56 0 0 chr3R 1505489 1505525 -26399528 + AT_rich Low_complexity Low_complexity 1 36 0 4 596 228 312 0 0 chr3R 1512105 1512185 -26392868 + CT-rich Low_complexity Low_complexity 3 82 0 4 596 214 297 16 0 chr3R 1517005 1517069 -26387984 + (CTG)n Simple_repeat Simple_repeat 2 66 0 4 596 454 250 0 31 chr3R 1519319 1519447 -26385606 + DNAREP1_DM LINE Penelope 1 124 -470 4 596 798 144 44 38 chr3R 1519448 1519607 -26385446 + DNAREP1_DM LINE Penelope 358 517 -77 4 596 213 121 0 0 chr3R 1519944 1519977 -26385076 + (CAA)n Simple_repeat Simple_repeat 3 35 0 4 596 217 174 0 21 chr3R 1520016 1520063 -26384990 + (CAA)n Simple_repeat Simple_repeat 1 46 0 4 596 253 224 0 0 chr3R 1521385 1521434 -26383619 - DNAREP1_DM LINE Penelope -523 71 23 4 596 35 0 0 0 chr3R 1521816 1521851 -26383202 + AT_rich Low_complexity Low_complexity 1 35 0 4 596 209 189 0 36 chr3R 1522052 1522107 -26382946 + (CAA)n Simple_repeat Simple_repeat 1 53 0 4 596 21 57 0 0 chr3R 1525039 1525074 -26379979 + AT_rich Low_complexity Low_complexity 1 35 0 4 596 546 75 0 0 chr3R 1526916 1526996 -26378057 + (TC)n Simple_repeat Simple_repeat 2 81 0 4 596 240 35 0 0 chr3R 1527436 1527465 -26377588 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 596 24 0 0 0 chr3R 1529461 1529485 -26375568 + AT_rich Low_complexity Low_complexity 1 24 0 4 596 28 0 0 0 chr3R 1532304 1532332 -26372721 + AT_rich Low_complexity Low_complexity 1 28 0 4 596 189 107 0 0 chr3R 1539336 1539364 -26365689 + (CCG)n Simple_repeat Simple_repeat 1 28 0 4 596 279 0 0 0 chr3R 1539873 1539904 -26365149 + (CTG)n Simple_repeat Simple_repeat 1 31 0 4 596 261 98 0 0 chr3R 1542135 1542176 -26362877 + (CTG)n Simple_repeat Simple_repeat 3 43 0 4 596 213 167 0 0 chr3R 1542228 1542282 -26362771 + (CTG)n Simple_repeat Simple_repeat 2 55 0 4 596 21 36 0 0 chr3R 1543056 1543084 -26361969 + AT_rich Low_complexity Low_complexity 1 28 0 4 596 204 111 0 0 chr3R 1549152 1549188 -26355865 + (CAT)n Simple_repeat Simple_repeat 3 38 0 4 596 21 0 0 0 chr3R 1549243 1549264 -26355789 + AT_rich Low_complexity Low_complexity 1 21 0 4 596 180 0 0 0 chr3R 1551966 1551986 -26353067 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 596 1017 169 5 29 chr3R 1554253 1554460 -26350593 + DNAREP1_DM LINE Penelope 1 202 -392 4 596 326 89 0 0 chr3R 1554443 1554488 -26350565 + DNAREP1_DM LINE Penelope 433 477 -117 4 596 22 0 0 0 chr3R 1557286 1557308 -26347745 + AT_rich Low_complexity Low_complexity 1 22 0 4 596 457 79 0 45 chr3R 1558028 1558094 -26346959 + DNAREP1_DM LINE Penelope 3 65 -529 4 596 536 120 62 107 chr3R 1558100 1558212 -26346841 + DNAREP1_DM LINE Penelope 353 459 -135 4 596 561 324 50 15 chr3R 1558614 1558874 -26346179 - Jockey2 LINE Jockey -316 3112 2844 4 596 33 73 0 0 chr3R 1562255 1562323 -26342730 + AT_rich Low_complexity Low_complexity 1 68 0 4 596 25 31 0 0 chr3R 1569972 1570004 -26335049 + AT_rich Low_complexity Low_complexity 1 32 0 4 596 212 136 45 0 chr3R 1570109 1570153 -26334900 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 596 211 191 14 14 chr3R 1571572 1571641 -26333412 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 596 1699 0 0 0 chr3R 1571789 1571975 -26333078 + POGON1 DNA Pogo 1 186 0 4 74 2040 5 0 0 chr3R 1572792 1573016 -26332037 + DIVER_LTR LTR Pao 1 224 0 4 597 52804 2 0 0 chr3R 1573037 1578680 -26326373 + DIVER_I LTR Pao 1 5643 0 4 597 2040 5 0 0 chr3R 1578680 1578904 -26326149 + DIVER_LTR LTR Pao 1 224 0 4 597 22 0 0 0 chr3R 1582447 1582469 -26322584 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 22 0 0 0 chr3R 1582807 1582829 -26322224 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 422 185 134 36 chr3R 1589252 1589364 -26315689 + DNAREP1_DM LINE Penelope 414 536 -58 4 597 3153 40 5 3 chr3R 1589569 1589947 -26315106 - STALKER4_LTR LTR Gypsy -23 379 1 4 597 293 178 259 45 chr3R 1592266 1592378 -26312675 - DNAREP1_DM LINE Penelope -154 440 305 4 597 23 33 0 0 chr3R 1596101 1596131 -26308922 + AT_rich Low_complexity Low_complexity 1 30 0 4 597 246 321 0 0 chr3R 1599755 1599839 -26305214 + (GCTG)n Simple_repeat Simple_repeat 3 86 0 4 597 28 0 0 0 chr3R 1603129 1603157 -26301896 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 482 217 19 0 chr3R 1603912 1604018 -26301035 + DNAREP1_DM LINE Penelope 1 108 -486 4 597 652 160 158 49 chr3R 1604024 1604208 -26300845 + DNAREP1_DM LINE Penelope 382 585 -9 4 597 21 0 0 0 chr3R 1604830 1604851 -26300202 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 250 240 0 0 chr3R 1606355 1606405 -26298648 + (CATA)n Simple_repeat Simple_repeat 4 53 0 4 597 29 60 0 0 chr3R 1608347 1608397 -26296656 + AT_rich Low_complexity Low_complexity 1 50 0 4 597 34 42 0 0 chr3R 1613033 1613081 -26291972 + AT_rich Low_complexity Low_complexity 1 48 0 4 597 200 312 0 0 chr3R 1616300 1616364 -26288689 + GA-rich Low_complexity Low_complexity 1 64 0 4 597 33 25 0 0 chr3R 1621806 1621846 -26283207 + AT_rich Low_complexity Low_complexity 1 40 0 4 597 22 0 0 0 chr3R 1626731 1626753 -26278300 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 306 87 0 0 chr3R 1627934 1627980 -26277073 + (CCGAA)n Simple_repeat Simple_repeat 1 46 0 4 597 24 53 0 0 chr3R 1631021 1631059 -26273994 + AT_rich Low_complexity Low_complexity 1 38 0 4 597 213 121 0 0 chr3R 1633259 1633292 -26271761 + (TAA)n Simple_repeat Simple_repeat 3 35 0 4 597 1699 0 0 0 chr3R 1634888 1635074 -26269979 - POGON1 DNA Pogo 0 186 1 4 597 262 67 22 22 chr3R 1637212 1637258 -26267795 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 597 22 70 0 0 chr3R 1638725 1638768 -26266285 + AT_rich Low_complexity Low_complexity 1 43 0 4 597 204 67 0 0 chr3R 1641378 1641408 -26263645 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 597 22 70 0 0 chr3R 1641782 1641825 -26263228 + AT_rich Low_complexity Low_complexity 1 43 0 4 597 219 69 0 0 chr3R 1642191 1642220 -26262833 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 597 23 33 0 0 chr3R 1647449 1647479 -26257574 + AT_rich Low_complexity Low_complexity 1 30 0 4 597 9420 20 2 4 chr3R 1648156 1649263 -26255790 - PROTOP_A DNA P 0 1105 1 4 597 27 29 0 0 chr3R 1650392 1650426 -26254627 + AT_rich Low_complexity Low_complexity 1 34 0 4 597 21 36 0 0 chr3R 1651428 1651456 -26253597 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 21 0 0 0 chr3R 1652266 1652287 -26252766 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 26699 31 28 3 chr3R 1652490 1655641 -26249412 - G5_DM LINE Jockey 0 4856 1628 4 597 21 0 0 0 chr3R 1659093 1659114 -26245939 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 404 55 0 127 chr3R 1662184 1662247 -26242806 - DNAREP1_DM LINE Penelope -115 479 425 4 597 485 121 141 0 chr3R 1662279 1662378 -26242675 - DNAREP1_DM LINE Penelope -481 113 1 4 597 28 0 0 0 chr3R 1665298 1665326 -26239727 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 299 194 29 15 chr3R 1665595 1665663 -26239390 - DNAREP1_DM LINE Penelope -504 90 22 4 597 25 31 0 0 chr3R 1667473 1667505 -26237548 + AT_rich Low_complexity Low_complexity 1 32 0 4 597 236 218 0 18 chr3R 1669374 1669430 -26235623 + (TATAG)n Simple_repeat Simple_repeat 1 55 0 4 597 36 0 0 0 chr3R 1672817 1672853 -26232200 + AT_rich Low_complexity Low_complexity 1 36 0 4 597 202 61 61 0 chr3R 1674031 1674064 -26230989 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 4 597 201 195 0 0 chr3R 1674486 1674527 -26230526 + (CATA)n Simple_repeat Simple_repeat 3 43 0 4 597 279 197 0 16 chr3R 1677673 1677735 -26227318 - FB4_DM DNA Tc1 -4028 61 1 4 597 21 0 0 0 chr3R 1678417 1678438 -26226615 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 25 51 0 0 chr3R 1679073 1679112 -26225941 + AT_rich Low_complexity Low_complexity 1 39 0 4 597 180 152 0 0 chr3R 1680867 1680900 -26224153 + T-rich Low_complexity Low_complexity 1 33 0 4 597 38 68 0 0 chr3R 1681275 1681348 -26223705 + AT_rich Low_complexity Low_complexity 1 73 0 4 597 21 36 0 0 chr3R 1681382 1681410 -26223643 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 28 29 0 0 chr3R 1682359 1682394 -26222659 + AT_rich Low_complexity Low_complexity 1 35 0 4 597 21 0 0 0 chr3R 1685302 1685323 -26219730 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 202 216 0 0 chr3R 1686015 1686052 -26219001 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 597 203 156 0 0 chr3R 1686258 1686290 -26218763 + (CATA)n Simple_repeat Simple_repeat 3 34 0 4 597 192 77 0 0 chr3R 1689305 1689331 -26215722 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 597 30 45 0 0 chr3R 1693085 1693129 -26211924 + AT_rich Low_complexity Low_complexity 1 44 0 4 597 34 24 0 0 chr3R 1693226 1693267 -26211786 + AT_rich Low_complexity Low_complexity 1 41 0 4 597 23 0 0 0 chr3R 1695210 1695233 -26209820 + AT_rich Low_complexity Low_complexity 1 23 0 4 597 242 125 0 20 chr3R 1698878 1698927 -26206126 + (CAA)n Simple_repeat Simple_repeat 1 48 0 4 597 22 0 0 0 chr3R 1701331 1701353 -26203700 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 213 226 0 0 chr3R 1702550 1702603 -26202450 + (TCG)n Simple_repeat Simple_repeat 2 54 0 4 597 291 130 0 0 chr3R 1703163 1703217 -26201836 + (CTG)n Simple_repeat Simple_repeat 3 56 0 4 597 242 174 29 14 chr3R 1703264 1703334 -26201719 - ROO_I LTR Pao -7511 745 675 4 597 198 150 0 0 chr3R 1703441 1703481 -26201572 + (CTG)n Simple_repeat Simple_repeat 2 41 0 4 598 1213 144 126 19 chr3R 1704930 1705192 -26199861 + DMRP1 Unknown Unknown 2 291 -55 4 598 21 0 0 0 chr3R 1705954 1705975 -26199078 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 189 147 0 0 chr3R 1707273 1707307 -26197746 + (CATAC)n Simple_repeat Simple_repeat 2 35 0 4 598 246 32 0 0 chr3R 1708245 1708276 -26196777 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 598 27 0 0 0 chr3R 1709606 1709633 -26195420 + AT_rich Low_complexity Low_complexity 1 27 0 4 598 21 71 0 0 chr3R 1713496 1713538 -26191515 + AT_rich Low_complexity Low_complexity 1 42 0 4 598 294 143 0 0 chr3R 1713796 1713845 -26191208 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 4 598 21 0 0 0 chr3R 1714491 1714512 -26190541 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 294 29 0 0 chr3R 1715085 1715120 -26189933 + (GGATG)n Simple_repeat Simple_repeat 3 37 0 4 598 271 0 0 49 chr3R 1718252 1718293 -26186760 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 4 598 22 0 0 0 chr3R 1719077 1719099 -26185954 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 232 234 0 0 chr3R 1721273 1721320 -26183733 + (GAGTG)n Simple_repeat Simple_repeat 2 48 0 4 598 230 116 23 0 chr3R 1723725 1723768 -26181285 + (TTTTTG)n Simple_repeat Simple_repeat 3 46 0 4 598 22 35 0 0 chr3R 1726579 1726608 -26178445 + AT_rich Low_complexity Low_complexity 1 29 0 4 598 21 0 0 0 chr3R 1727123 1727144 -26177909 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 29 0 0 0 chr3R 1727592 1727621 -26177432 + AT_rich Low_complexity Low_complexity 1 29 0 4 598 24 32 0 0 chr3R 1729140 1729171 -26175882 + AT_rich Low_complexity Low_complexity 1 31 0 4 598 21 0 0 0 chr3R 1729780 1729801 -26175252 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 202 236 0 18 chr3R 1734866 1734922 -26170131 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 598 204 282 14 0 chr3R 1735094 1735165 -26169888 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 598 22 0 0 0 chr3R 1739238 1739260 -26165793 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 30 0 0 0 chr3R 1739424 1739454 -26165599 + AT_rich Low_complexity Low_complexity 1 30 0 4 598 21 71 0 0 chr3R 1739476 1739518 -26165535 + AT_rich Low_complexity Low_complexity 1 42 0 4 598 301 195 13 0 chr3R 1743058 1743135 -26161918 - ROO_I LTR Pao -7527 729 652 4 598 323 180 44 12 chr3R 1744618 1744703 -26160350 + DNAREP1_DM LINE Penelope 429 484 -110 4 598 32 43 0 0 chr3R 1746905 1746951 -26158102 + AT_rich Low_complexity Low_complexity 1 46 0 4 598 212 227 0 0 chr3R 1751614 1751658 -26153395 + (CCCCAG)n Simple_repeat Simple_repeat 2 45 0 4 598 1673 0 5 0 chr3R 1753335 1753520 -26151533 + POGON1 DNA Pogo 1 186 0 4 598 182 220 17 0 chr3R 1758789 1758848 -26146205 + (GCTG)n Simple_repeat Simple_repeat 3 62 0 4 598 667 93 21 0 chr3R 1759274 1759371 -26145682 - DNAREP1_DM LINE Penelope 0 594 496 4 598 220 195 0 0 chr3R 1765560 1765601 -26139452 + (CTG)n Simple_repeat Simple_repeat 3 43 0 4 598 21 0 0 0 chr3R 1771790 1771811 -26133242 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 21 57 0 0 chr3R 1777029 1777064 -26127989 + AT_rich Low_complexity Low_complexity 1 35 0 4 598 315 154 0 0 chr3R 1777739 1777804 -26127249 + (CAGC)n Simple_repeat Simple_repeat 4 68 0 4 598 22 0 0 0 chr3R 1778894 1778916 -26126137 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 22 0 0 0 chr3R 1780015 1780037 -26125016 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 195 42 0 0 chr3R 1780935 1780959 -26124094 + (TTCGG)n Simple_repeat Simple_repeat 2 25 0 4 598 23 0 0 0 chr3R 1781905 1781928 -26123125 + AT_rich Low_complexity Low_complexity 1 23 0 4 598 223 227 0 98 chr3R 1783377 1783499 -26121554 + T-rich Low_complexity Low_complexity 4 113 0 4 598 25 0 0 0 chr3R 1784952 1784977 -26120076 + AT_rich Low_complexity Low_complexity 1 25 0 4 598 22 0 0 0 chr3R 1787411 1787433 -26117620 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 239 167 16 32 chr3R 1787551 1787613 -26117440 + (TTCA)n Simple_repeat Simple_repeat 2 62 0 4 598 213 279 0 0 chr3R 1788661 1788729 -26116324 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 598 27 0 0 0 chr3R 1793357 1793384 -26111669 + AT_rich Low_complexity Low_complexity 1 27 0 4 598 266 73 0 24 chr3R 1795852 1795894 -26109159 + (CAATC)n Simple_repeat Simple_repeat 5 45 0 4 598 24 53 0 0 chr3R 1799596 1799634 -26105419 + AT_rich Low_complexity Low_complexity 1 38 0 4 598 183 80 0 0 chr3R 1800559 1800584 -26104469 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 598 35 54 0 0 chr3R 1801842 1801898 -26103155 + AT_rich Low_complexity Low_complexity 1 56 0 4 598 23 33 0 0 chr3R 1801907 1801937 -26103116 + AT_rich Low_complexity Low_complexity 1 30 0 4 598 286 211 0 62 chr3R 1803556 1803652 -26101401 + ROO_I LTR Pao 655 744 -7512 4 598 21 0 0 0 chr3R 1806518 1806539 -26098514 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 192 158 0 0 chr3R 1806790 1806828 -26098225 + (GAATG)n Simple_repeat Simple_repeat 3 40 0 4 598 207 88 0 0 chr3R 1812091 1812125 -26092928 + (CATTC)n Simple_repeat Simple_repeat 3 36 0 4 598 322 167 0 0 chr3R 1814116 1814170 -26090883 - DNAREP1_DM LINE Penelope -540 54 1 4 598 22 0 0 0 chr3R 1819666 1819688 -26085365 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 1052 55 10 53 chr3R 1821345 1821511 -26083542 - G5A_DM LINE Jockey 0 2841 2700 4 598 24 0 0 0 chr3R 1822294 1822318 -26082735 + AT_rich Low_complexity Low_complexity 1 24 0 4 598 183 139 0 0 chr3R 1826971 1827007 -26078046 + (CCG)n Simple_repeat Simple_repeat 2 37 0 4 598 29 0 0 0 chr3R 1827659 1827688 -26077365 + AT_rich Low_complexity Low_complexity 1 29 0 4 598 230 160 20 0 chr3R 1828840 1828890 -26076163 + GA-rich Low_complexity Low_complexity 2 52 0 4 598 310 259 11 11 chr3R 1830723 1830813 -26074240 + (CCG)n Simple_repeat Simple_repeat 3 92 0 4 599 28 0 0 0 chr3R 1835709 1835737 -26069316 + AT_rich Low_complexity Low_complexity 1 28 0 4 599 227 288 0 0 chr3R 1838546 1838626 -26066427 + (TCTG)n Simple_repeat Simple_repeat 4 83 0 4 599 21 57 0 0 chr3R 1838979 1839014 -26066039 + AT_rich Low_complexity Low_complexity 1 35 0 4 599 216 158 0 0 chr3R 1839819 1839857 -26065196 + T-rich Low_complexity Low_complexity 3 40 0 4 599 27 62 0 0 chr3R 1840554 1840602 -26064451 + AT_rich Low_complexity Low_complexity 1 48 0 4 599 3799 5 0 0 chr3R 1841738 1842155 -26062898 - TIRANT_LTR LTR Gypsy 0 417 1 4 599 68123 2 0 1 chr3R 1842155 1849745 -26055308 - TIRANT_I LTR Gypsy 0 7692 1 4 599 3799 5 0 0 chr3R 1849745 1850162 -26054891 - TIRANT_LTR LTR Gypsy 0 417 1 4 599 23 0 0 0 chr3R 1850543 1850566 -26054487 + AT_rich Low_complexity Low_complexity 1 23 0 4 599 415 233 78 85 chr3R 1851219 1851360 -26053693 - DNAREP1_DM LINE Penelope -26 568 429 4 599 26 0 0 0 chr3R 1853105 1853131 -26051922 + AT_rich Low_complexity Low_complexity 1 26 0 4 599 21 0 0 0 chr3R 1855711 1855732 -26049321 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 342 182 26 23 chr3R 1857912 1858006 -26047047 - DNAREP1_DM LINE Penelope -150 444 384 4 599 27 29 0 0 chr3R 1858690 1858724 -26046329 + AT_rich Low_complexity Low_complexity 1 34 0 4 599 216 86 0 0 chr3R 1860112 1860147 -26044906 + (CCA)n Simple_repeat Simple_repeat 2 36 0 4 599 218 224 35 0 chr3R 1864323 1864381 -26040672 + (CAG)n Simple_repeat Simple_repeat 2 61 0 4 599 207 125 24 24 chr3R 1864665 1864706 -26040347 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 4 599 207 69 0 0 chr3R 1864923 1864952 -26040101 + (ACTCG)n Simple_repeat Simple_repeat 1 29 0 4 599 194 62 31 0 chr3R 1865593 1865625 -26039428 + (CAG)n Simple_repeat Simple_repeat 3 35 0 4 599 225 242 97 0 chr3R 1866492 1866554 -26038499 + DNAREP1_DM LINE Penelope 379 446 -148 4 599 224 255 0 0 chr3R 1872768 1872815 -26032238 + (ATGGTG)n Simple_repeat Simple_repeat 6 52 0 4 599 22 56 0 0 chr3R 1877050 1877086 -26027967 + AT_rich Low_complexity Low_complexity 1 36 0 4 599 30 27 0 0 chr3R 1878714 1878751 -26026302 + AT_rich Low_complexity Low_complexity 1 37 0 4 599 24 0 0 0 chr3R 1879267 1879291 -26025762 + AT_rich Low_complexity Low_complexity 1 24 0 4 599 35 41 0 0 chr3R 1883959 1884008 -26021045 + AT_rich Low_complexity Low_complexity 1 49 0 4 599 21 0 0 0 chr3R 1890474 1890495 -26014558 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 21 0 0 0 chr3R 1892103 1892124 -26012929 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 32 67 0 0 chr3R 1893655 1893715 -26011338 + AT_rich Low_complexity Low_complexity 1 60 0 4 599 21 36 0 0 chr3R 1895533 1895561 -26009492 + AT_rich Low_complexity Low_complexity 1 28 0 4 599 27 81 0 0 chr3R 1896312 1896374 -26008679 + AT_rich Low_complexity Low_complexity 1 62 0 4 599 21 0 0 0 chr3R 1905099 1905120 -25999933 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 227 204 0 0 chr3R 1906118 1906167 -25998886 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 599 21 0 0 0 chr3R 1909898 1909919 -25995134 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 213 39 0 0 chr3R 1912545 1912571 -25992482 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 599 204 273 0 18 chr3R 1913385 1913441 -25991612 + (CTG)n Simple_repeat Simple_repeat 2 56 0 4 599 27 49 0 0 chr3R 1914498 1914539 -25990514 + AT_rich Low_complexity Low_complexity 1 41 0 4 599 282 29 0 0 chr3R 1916651 1916686 -25988367 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 599 22 0 0 0 chr3R 1917156 1917178 -25987875 + AT_rich Low_complexity Low_complexity 1 22 0 4 599 24 32 0 0 chr3R 1917852 1917883 -25987170 + AT_rich Low_complexity Low_complexity 1 31 0 4 599 21 57 0 0 chr3R 1918760 1918795 -25986258 + AT_rich Low_complexity Low_complexity 1 35 0 4 599 292 185 32 21 chr3R 1919176 1919270 -25985783 + (TTG)n Simple_repeat Simple_repeat 3 97 0 4 599 21 0 0 0 chr3R 1922611 1922632 -25982421 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 198 103 0 0 chr3R 1923156 1923185 -25981868 + (CATA)n Simple_repeat Simple_repeat 3 31 0 4 599 186 43 0 0 chr3R 1926012 1926035 -25979018 + (CGAAT)n Simple_repeat Simple_repeat 3 25 0 4 599 180 77 0 0 chr3R 1932096 1932122 -25972931 + (TGG)n Simple_repeat Simple_repeat 2 27 0 4 599 26 0 0 0 chr3R 1932470 1932496 -25972557 + AT_rich Low_complexity Low_complexity 1 26 0 4 599 226 316 0 0 chr3R 1934709 1934785 -25970268 - DNAREP1_DM LINE Penelope -151 443 368 4 599 27 49 0 0 chr3R 1939030 1939071 -25965982 + AT_rich Low_complexity Low_complexity 1 41 0 4 599 24 85 0 0 chr3R 1939454 1939513 -25965540 + AT_rich Low_complexity Low_complexity 1 59 0 4 599 23 33 0 0 chr3R 1941483 1941513 -25963540 + AT_rich Low_complexity Low_complexity 1 30 0 4 599 198 103 0 0 chr3R 1942741 1942770 -25962283 + (TCCG)n Simple_repeat Simple_repeat 3 31 0 4 599 21 36 0 0 chr3R 1943007 1943035 -25962018 + AT_rich Low_complexity Low_complexity 1 28 0 4 599 28 29 0 0 chr3R 1944755 1944790 -25960263 + AT_rich Low_complexity Low_complexity 1 35 0 4 599 234 0 0 0 chr3R 1944804 1944830 -25960223 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 599 1118 22 0 0 chr3R 1946936 1947071 -25957982 + BS LINE Jockey 4992 5126 0 4 599 22 0 0 0 chr3R 1947071 1947093 -25957960 + AT_rich Low_complexity Low_complexity 1 22 0 4 599 22 0 0 0 chr3R 1947297 1947319 -25957734 + AT_rich Low_complexity Low_complexity 1 22 0 4 599 34 0 0 0 chr3R 1952037 1952071 -25952982 + AT_rich Low_complexity Low_complexity 1 34 0 4 599 245 212 30 0 chr3R 1954007 1954073 -25950980 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 599 25 0 0 0 chr3R 1956229 1956254 -25948799 + AT_rich Low_complexity Low_complexity 1 25 0 4 599 185 108 0 26 chr3R 1959037 1959075 -25945978 + (CAG)n Simple_repeat Simple_repeat 3 39 0 4 599 431 109 0 0 chr3R 1962043 1962107 -25942946 - DNAREP1_DM LINE Penelope -26 568 505 4 599 210 91 0 0 chr3R 1962107 1962140 -25942913 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 599 299 81 0 0 chr3R 1962145 1962182 -25942871 - DNAREP1_DM LINE Penelope -557 37 1 4 599 297 109 0 0 chr3R 1965332 1965378 -25939675 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 599 27 29 0 0 chr3R 1965656 1965690 -25939363 + AT_rich Low_complexity Low_complexity 1 34 0 4 74 227 254 0 0 chr3R 1966043 1966098 -25938955 + DNAREP1_DM LINE Penelope 1 55 -539 4 600 28 71 0 0 chr3R 1967244 1967300 -25937753 + AT_rich Low_complexity Low_complexity 1 56 0 4 600 299 96 0 19 chr3R 1969564 1969617 -25935436 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 600 204 273 15 0 chr3R 1978997 1979063 -25925990 + (CAG)n Simple_repeat Simple_repeat 1 67 0 4 600 22 35 0 0 chr3R 1981326 1981355 -25923698 + AT_rich Low_complexity Low_complexity 1 29 0 4 600 249 33 0 0 chr3R 1983009 1983039 -25922014 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 600 27 29 0 0 chr3R 1983812 1983846 -25921207 + AT_rich Low_complexity Low_complexity 1 34 0 4 600 3786 7 0 0 chr3R 1984285 1984702 -25920351 + TIRANT_LTR LTR Gypsy 1 417 0 4 600 71179 0 0 0 chr3R 1984702 1992394 -25912659 + TIRANT_I LTR Gypsy 1 7692 0 4 600 3786 7 0 0 chr3R 1992394 1992811 -25912242 + TIRANT_LTR LTR Gypsy 1 417 0 4 600 208 80 98 20 chr3R 1996204 1996255 -25908798 + (TTTAA)n Simple_repeat Simple_repeat 3 57 0 4 600 21 0 0 0 chr3R 1997504 1997525 -25907528 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 23 68 0 0 chr3R 1997629 1997673 -25907380 + AT_rich Low_complexity Low_complexity 1 44 0 4 600 1059 146 33 102 chr3R 2001037 2001281 -25903772 + DMLTR5 LTR Gypsy 40 266 0 4 600 2232 90 39 34 chr3R 2001280 2001637 -25903416 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 4 600 33 43 0 0 chr3R 2001652 2001699 -25903354 + AT_rich Low_complexity Low_complexity 1 47 0 4 600 30936 139 2 8 chr3R 2001862 2006529 -25898524 + HMSBEAGLE_I LTR Gypsy 1212 5850 -679 4 600 1341 228 53 108 chr3R 2006878 2007351 -25897702 + HMSBEAGLE_I LTR Gypsy 5810 6256 -273 4 600 326 171 27 67 chr3R 2007532 2007607 -25897446 + HMSBEAGLE_I LTR Gypsy 6334 6405 -124 4 600 858 135 0 0 chr3R 2007706 2007832 -25897221 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 4 600 1059 146 33 102 chr3R 2007920 2008164 -25896889 + DMLTR5 LTR Gypsy 40 266 0 4 600 23 33 0 0 chr3R 2011683 2011713 -25893340 + AT_rich Low_complexity Low_complexity 1 30 0 4 600 225 0 0 0 chr3R 2013916 2013941 -25891112 + (T)n Simple_repeat Simple_repeat 1 25 0 4 600 25 0 0 0 chr3R 2020146 2020171 -25884882 + AT_rich Low_complexity Low_complexity 1 25 0 4 600 198 0 0 0 chr3R 2020305 2020327 -25884726 + (TAA)n Simple_repeat Simple_repeat 1 22 0 4 600 224 241 0 0 chr3R 2023544 2023598 -25881455 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 600 22 35 0 0 chr3R 2030895 2030924 -25874129 + AT_rich Low_complexity Low_complexity 1 29 0 4 600 1070 23 0 0 chr3R 2032063 2032193 -25872860 + BS LINE Jockey 4997 5126 0 4 600 216 0 0 0 chr3R 2032193 2032217 -25872836 + (A)n Simple_repeat Simple_repeat 1 24 0 4 600 23 54 0 0 chr3R 2032430 2032467 -25872586 + AT_rich Low_complexity Low_complexity 1 37 0 4 600 27 29 0 0 chr3R 2038348 2038382 -25866671 + AT_rich Low_complexity Low_complexity 1 34 0 4 600 27 0 0 0 chr3R 2043926 2043953 -25861100 + AT_rich Low_complexity Low_complexity 1 27 0 4 600 314 163 10 0 chr3R 2044752 2044850 -25860203 + (TA)n Simple_repeat Simple_repeat 1 99 0 4 600 213 294 12 12 chr3R 2046157 2046243 -25858810 + (CCG)n Simple_repeat Simple_repeat 2 87 0 4 600 218 208 21 0 chr3R 2047566 2047614 -25857439 + (CAG)n Simple_repeat Simple_repeat 2 50 0 4 600 31 68 0 0 chr3R 2047935 2047994 -25857059 + AT_rich Low_complexity Low_complexity 1 59 0 4 600 22 0 0 0 chr3R 2048665 2048687 -25856366 + AT_rich Low_complexity Low_complexity 1 22 0 4 600 42 20 0 0 chr3R 2050088 2050137 -25854916 + AT_rich Low_complexity Low_complexity 1 49 0 4 600 23 54 0 0 chr3R 2051058 2051095 -25853958 + AT_rich Low_complexity Low_complexity 1 37 0 4 600 21 0 0 0 chr3R 2054515 2054536 -25850517 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 21 0 0 0 chr3R 2055006 2055027 -25850026 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 206 158 0 26 chr3R 2059943 2059982 -25845071 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 600 42 0 0 0 chr3R 2062102 2062144 -25842909 + AT_rich Low_complexity Low_complexity 1 42 0 4 600 188 125 0 48 chr3R 2062476 2062518 -25842535 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 4 600 237 33 0 0 chr3R 2063093 2063123 -25841930 + (AACTG)n Simple_repeat Simple_repeat 1 30 0 4 600 2361 59 75 0 chr3R 2064003 2064309 -25840744 + BS2 LINE Jockey 4031 4359 -362 4 600 1865 79 16 0 chr3R 2064316 2064570 -25840483 + BS2 LINE Jockey 4464 4721 0 4 600 21 36 0 0 chr3R 2065175 2065203 -25839850 + AT_rich Low_complexity Low_complexity 1 28 0 4 600 21 0 0 0 chr3R 2065290 2065311 -25839742 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 35 63 0 0 chr3R 2067204 2067267 -25837786 + AT_rich Low_complexity Low_complexity 1 63 0 4 600 1545 19 3 0 chr3R 2067959 2068318 -25836735 + (TTA)n Simple_repeat Simple_repeat 1 360 0 4 600 23 0 0 0 chr3R 2071456 2071479 -25833574 + AT_rich Low_complexity Low_complexity 1 23 0 4 600 21 0 0 0 chr3R 2072121 2072142 -25832911 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 21 89 0 0 chr3R 2072694 2072750 -25832303 + AT_rich Low_complexity Low_complexity 1 56 0 4 600 28 86 0 0 chr3R 2074043 2074113 -25830940 + AT_rich Low_complexity Low_complexity 1 70 0 4 600 39 0 0 0 chr3R 2075918 2075957 -25829096 + AT_rich Low_complexity Low_complexity 1 39 0 4 600 180 111 0 0 chr3R 2076259 2076286 -25828767 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 4 600 219 114 45 0 chr3R 2076517 2076561 -25828492 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 4 600 27 0 0 0 chr3R 2076891 2076918 -25828135 + AT_rich Low_complexity Low_complexity 1 27 0 4 600 207 167 0 0 chr3R 2077677 2077719 -25827334 + A-rich Low_complexity Low_complexity 1 42 0 4 600 1102 29 0 0 chr3R 2079842 2079982 -25825071 + S_DM DNA Tc1 1597 1736 0 4 600 422 168 218 0 chr3R 2079982 2080081 -25824972 - DNAREP1_DM LINE Penelope -108 486 366 4 600 21 36 0 0 chr3R 2081723 2081751 -25823302 + AT_rich Low_complexity Low_complexity 1 28 0 4 600 27 49 0 0 chr3R 2083744 2083785 -25821268 + AT_rich Low_complexity Low_complexity 1 41 0 4 600 25 0 0 0 chr3R 2083892 2083917 -25821136 + AT_rich Low_complexity Low_complexity 1 25 0 4 600 189 74 0 0 chr3R 2087681 2087708 -25817345 + (CTTAA)n Simple_repeat Simple_repeat 4 30 0 4 600 192 40 0 0 chr3R 2088142 2088167 -25816886 + (T)n Simple_repeat Simple_repeat 1 25 0 4 600 21 36 0 0 chr3R 2090212 2090240 -25814813 + AT_rich Low_complexity Low_complexity 1 28 0 4 600 29 47 0 0 chr3R 2090474 2090517 -25814536 + AT_rich Low_complexity Low_complexity 1 43 0 4 600 24 0 0 0 chr3R 2091251 2091275 -25813778 + AT_rich Low_complexity Low_complexity 1 24 0 4 600 387 195 13 0 chr3R 2091405 2091482 -25813571 + DNAREP1_DM LINE Penelope 517 594 0 4 600 213 202 0 80 chr3R 2092480 2092593 -25812460 + GA-rich Low_complexity Low_complexity 2 105 0 4 600 291 107 70 18 chr3R 2093228 2093285 -25811768 + DNAREP1_DM LINE Penelope 248 307 -287 4 600 45 34 0 0 chr3R 2095532 2095591 -25809462 + AT_rich Low_complexity Low_complexity 1 59 0 4 601 21 0 0 0 chr3R 2101388 2101409 -25803644 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 208 146 36 18 chr3R 2103810 2103866 -25801187 + (TTATA)n Simple_repeat Simple_repeat 5 61 0 4 601 23 0 0 0 chr3R 2103897 2103920 -25801133 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 201 39 0 0 chr3R 2104194 2104220 -25800833 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 4 601 22 35 0 0 chr3R 2105954 2105983 -25799070 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 201 254 0 0 chr3R 2107124 2107183 -25797870 + (ATG)n Simple_repeat Simple_repeat 2 60 0 4 601 24 32 0 0 chr3R 2108091 2108122 -25796931 + AT_rich Low_complexity Low_complexity 1 31 0 4 601 1160 125 21 10 chr3R 2109284 2109491 -25795562 - BS2 LINE Jockey 0 4721 4534 4 601 23 0 0 0 chr3R 2109583 2109606 -25795447 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 26 50 0 0 chr3R 2109747 2109787 -25795266 + AT_rich Low_complexity Low_complexity 1 40 0 4 601 26 30 0 0 chr3R 2110176 2110209 -25794844 + AT_rich Low_complexity Low_complexity 1 33 0 4 601 201 354 0 0 chr3R 2110516 2110612 -25794441 + (CCG)n Simple_repeat Simple_repeat 2 97 0 4 601 322 273 0 0 chr3R 2110667 2110744 -25794309 + (CCG)n Simple_repeat Simple_repeat 2 78 0 4 601 21 71 0 0 chr3R 2111270 2111312 -25793741 + AT_rich Low_complexity Low_complexity 1 42 0 4 601 32 75 0 0 chr3R 2115734 2115801 -25789252 + AT_rich Low_complexity Low_complexity 1 67 0 4 601 282 238 0 0 chr3R 2119347 2119410 -25785643 + DNAREP1_DM LINE Penelope 381 443 -151 4 601 201 39 0 0 chr3R 2120855 2120881 -25784172 + (A)n Simple_repeat Simple_repeat 1 26 0 4 601 22 35 0 0 chr3R 2121501 2121530 -25783523 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 23 33 0 0 chr3R 2130130 2130160 -25774893 + AT_rich Low_complexity Low_complexity 1 30 0 4 601 29 47 0 0 chr3R 2132107 2132150 -25772903 + AT_rich Low_complexity Low_complexity 1 43 0 4 601 255 341 0 0 chr3R 2133094 2133258 -25771795 + (CAA)n Simple_repeat Simple_repeat 1 164 0 4 601 372 326 0 0 chr3R 2133357 2133532 -25771521 + (CAA)n Simple_repeat Simple_repeat 3 177 0 4 601 355 316 0 0 chr3R 2133543 2133711 -25771342 + (CAA)n Simple_repeat Simple_repeat 3 170 0 4 601 400 305 0 0 chr3R 2133741 2133915 -25771138 + (CAA)n Simple_repeat Simple_repeat 3 176 0 4 601 267 316 0 0 chr3R 2133951 2134068 -25770985 + (CAA)n Simple_repeat Simple_repeat 3 119 0 4 601 431 307 0 0 chr3R 2134098 2134274 -25770779 + (CAA)n Simple_repeat Simple_repeat 3 178 0 4 601 427 301 0 0 chr3R 2134402 2134578 -25770475 + (CAA)n Simple_repeat Simple_repeat 1 176 0 4 601 27 81 0 0 chr3R 2134873 2134935 -25770118 + AT_rich Low_complexity Low_complexity 1 62 0 4 601 22 0 0 0 chr3R 2136609 2136631 -25768422 + AT_rich Low_complexity Low_complexity 1 22 0 4 601 183 42 0 0 chr3R 2139728 2139752 -25765301 + (TAA)n Simple_repeat Simple_repeat 1 24 0 4 601 21 36 0 0 chr3R 2147154 2147182 -25757871 + AT_rich Low_complexity Low_complexity 1 28 0 4 601 207 167 0 0 chr3R 2147452 2147494 -25757559 + (CCCA)n Simple_repeat Simple_repeat 4 45 0 4 601 23 0 0 0 chr3R 2148010 2148033 -25757020 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 23 0 0 0 chr3R 2149297 2149320 -25755733 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 183 129 0 0 chr3R 2150537 2150568 -25754485 + (GAGTG)n Simple_repeat Simple_repeat 2 32 0 4 601 225 0 0 0 chr3R 2152668 2152693 -25752360 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 4 601 24 32 0 0 chr3R 2153262 2153293 -25751760 + AT_rich Low_complexity Low_complexity 1 31 0 4 601 27 0 0 0 chr3R 2154870 2154897 -25750156 + AT_rich Low_complexity Low_complexity 1 27 0 4 601 194 0 0 37 chr3R 2155305 2155332 -25749721 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 4 601 564 1 133 2 chr3R 2159520 2160496 -25744557 + (TAAA)n Simple_repeat Simple_repeat 1 1103 0 4 601 34 0 0 0 chr3R 2161442 2161476 -25743577 + AT_rich Low_complexity Low_complexity 1 34 0 4 601 23 33 0 0 chr3R 2162814 2162844 -25742209 + AT_rich Low_complexity Low_complexity 1 30 0 4 601 21 0 0 0 chr3R 2163268 2163289 -25741764 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 362 100 17 0 chr3R 2164171 2164231 -25740822 + (CAT)n Simple_repeat Simple_repeat 1 61 0 4 601 34 0 0 0 chr3R 2167094 2167128 -25737925 + AT_rich Low_complexity Low_complexity 1 34 0 4 601 28 48 0 0 chr3R 2167174 2167216 -25737837 + AT_rich Low_complexity Low_complexity 1 42 0 4 601 490 108 314 0 chr3R 2167218 2167320 -25737733 - DMRP1 Unknown Unknown -212 134 1 4 601 33 43 0 0 chr3R 2169483 2169530 -25735523 + AT_rich Low_complexity Low_complexity 1 47 0 4 601 25 65 0 0 chr3R 2169577 2169623 -25735430 + AT_rich Low_complexity Low_complexity 1 46 0 4 601 22 35 0 0 chr3R 2171734 2171763 -25733290 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 212 264 19 0 chr3R 2178430 2178483 -25726570 + (TATG)n Simple_repeat Simple_repeat 3 56 0 4 601 185 65 32 0 chr3R 2179954 2179985 -25725068 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 601 357 117 0 0 chr3R 2185245 2185305 -25719748 + (CAA)n Simple_repeat Simple_repeat 2 61 0 4 601 22 0 0 0 chr3R 2185351 2185373 -25719680 + AT_rich Low_complexity Low_complexity 1 22 0 4 601 34 24 0 0 chr3R 2185936 2185977 -25719076 + AT_rich Low_complexity Low_complexity 1 41 0 4 601 22 35 0 0 chr3R 2186713 2186742 -25718311 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 25 51 0 0 chr3R 2188064 2188103 -25716950 + AT_rich Low_complexity Low_complexity 1 39 0 4 601 306 129 210 0 chr3R 2189389 2189451 -25715602 + DNAREP1_DM LINE Penelope 383 457 -137 4 601 227 98 293 0 chr3R 2191150 2191191 -25713862 - R1_DM LINE R1 -11 5345 5293 4 601 602 185 60 33 chr3R 2191243 2191394 -25713659 - R1_DM LINE R1 -245 5111 4957 4 601 567 101 152 0 chr3R 2191523 2191622 -25713431 + DNAREP1_DM LINE Penelope 458 571 -23 4 601 224 306 0 0 chr3R 2192483 2192545 -25712508 + CT-rich Low_complexity Low_complexity 1 62 0 4 601 239 167 45 0 chr3R 2193435 2193501 -25711552 - ROO_I LTR Pao -7523 733 665 4 601 214 269 13 0 chr3R 2194356 2194434 -25710619 + (TAAA)n Simple_repeat Simple_repeat 3 81 0 4 601 27 0 0 0 chr3R 2197829 2197856 -25707197 + AT_rich Low_complexity Low_complexity 1 27 0 4 601 25 0 0 0 chr3R 2201216 2201241 -25703812 + AT_rich Low_complexity Low_complexity 1 25 0 4 601 23 33 0 0 chr3R 2201348 2201378 -25703675 + AT_rich Low_complexity Low_complexity 1 30 0 4 601 25 51 0 0 chr3R 2201420 2201459 -25703594 + AT_rich Low_complexity Low_complexity 1 39 0 4 601 22 0 0 0 chr3R 2201954 2201976 -25703077 + AT_rich Low_complexity Low_complexity 1 22 0 4 601 257 283 0 0 chr3R 2202462 2202575 -25702478 + (CAG)n Simple_repeat Simple_repeat 3 115 0 4 601 21 0 0 0 chr3R 2203915 2203936 -25701117 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 201 385 0 0 chr3R 2207121 2207290 -25697763 + GA-rich Low_complexity Low_complexity 2 170 0 4 601 183 162 0 0 chr3R 2207731 2207768 -25697285 + GA-rich Low_complexity Low_complexity 5 41 0 4 601 23 0 0 0 chr3R 2208540 2208563 -25696490 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 218 183 0 48 chr3R 2209327 2209390 -25695663 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 601 29 0 0 0 chr3R 2210610 2210639 -25694414 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 21 36 0 0 chr3R 2212426 2212454 -25692599 + AT_rich Low_complexity Low_complexity 1 28 0 4 601 24 0 0 0 chr3R 2213193 2213217 -25691836 + AT_rich Low_complexity Low_complexity 1 24 0 4 601 21 36 0 0 chr3R 2213511 2213539 -25691514 + AT_rich Low_complexity Low_complexity 1 28 0 4 601 301 205 38 25 chr3R 2214181 2214261 -25690792 + DNAREP1_DM LINE Penelope 32 112 -482 4 601 27 62 0 0 chr3R 2214895 2214943 -25690110 + AT_rich Low_complexity Low_complexity 1 48 0 4 601 191 61 0 29 chr3R 2215411 2215445 -25689608 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 601 21 0 0 0 chr3R 2216832 2216853 -25688200 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 300 53 0 0 chr3R 2217238 2217276 -25687777 + (CCA)n Simple_repeat Simple_repeat 2 39 0 4 601 367 220 78 20 chr3R 2223494 2223596 -25681457 + DNAREP1_DM LINE Penelope 1 108 -486 4 601 25 31 0 0 chr3R 2225683 2225715 -25679338 + AT_rich Low_complexity Low_complexity 1 32 0 4 601 25 51 0 0 chr3R 2225948 2225987 -25679066 + AT_rich Low_complexity Low_complexity 1 39 0 4 601 21 0 0 0 chr3R 2227524 2227545 -25677508 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 201 159 0 0 chr3R 2228745 2228789 -25676264 + CT-rich Low_complexity Low_complexity 2 45 0 4 602 21 0 0 0 chr3R 2230002 2230023 -25675030 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 25 51 0 0 chr3R 2231739 2231778 -25673275 + AT_rich Low_complexity Low_complexity 1 39 0 4 602 219 286 0 13 chr3R 2236511 2236589 -25668464 + GA-rich Low_complexity Low_complexity 2 78 0 4 602 200 139 28 0 chr3R 2237644 2237680 -25667373 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 602 24 0 0 0 chr3R 2238043 2238067 -25666986 + AT_rich Low_complexity Low_complexity 1 24 0 4 602 25 31 0 0 chr3R 2238439 2238471 -25666582 + AT_rich Low_complexity Low_complexity 1 32 0 4 602 564 42 0 0 chr3R 2239811 2239882 -25665171 + (CA)n Simple_repeat Simple_repeat 2 72 0 4 602 738 34 0 0 chr3R 2242446 2242535 -25662518 + (CA)n Simple_repeat Simple_repeat 1 89 0 4 602 20643 3 0 0 chr3R 2242535 2244781 -25660272 + DMRT1B LINE R1 2938 5183 0 4 602 243 0 0 0 chr3R 2244791 2244818 -25660235 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 602 201 300 0 0 chr3R 2245753 2245813 -25659240 + CT-rich Low_complexity Low_complexity 2 61 0 4 602 22 0 0 0 chr3R 2246883 2246905 -25658148 + GC_rich Low_complexity Low_complexity 1 22 0 4 602 198 118 0 0 chr3R 2247365 2247399 -25657654 + (CAACT)n Simple_repeat Simple_repeat 4 37 0 4 602 21 0 0 0 chr3R 2248830 2248851 -25656202 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 21 71 0 0 chr3R 2250599 2250641 -25654412 + AT_rich Low_complexity Low_complexity 1 42 0 4 602 21 71 0 0 chr3R 2252245 2252287 -25652766 + AT_rich Low_complexity Low_complexity 1 42 0 4 602 186 71 0 0 chr3R 2254430 2254458 -25650595 + (A)n Simple_repeat Simple_repeat 1 28 0 4 602 216 130 0 0 chr3R 2255564 2255610 -25649443 + (T)n Simple_repeat Simple_repeat 1 46 0 4 602 201 163 0 0 chr3R 2256121 2256170 -25648883 + (TGGG)n Simple_repeat Simple_repeat 3 51 0 4 602 29 60 0 0 chr3R 2256928 2256978 -25648075 + AT_rich Low_complexity Low_complexity 1 50 0 4 602 194 106 90 15 chr3R 2257334 2257401 -25647652 + (TATAA)n Simple_repeat Simple_repeat 5 76 0 4 602 225 227 68 68 chr3R 2258805 2258923 -25646130 + Gypsy6_I LTR Gypsy 208 325 -6687 4 602 23 33 0 0 chr3R 2259878 2259908 -25645145 + AT_rich Low_complexity Low_complexity 1 30 0 4 602 203 303 0 62 chr3R 2261170 2261251 -25643802 + (CATA)n Simple_repeat Simple_repeat 2 77 0 4 602 268 279 13 13 chr3R 2267869 2267974 -25637079 + (CAG)n Simple_repeat Simple_repeat 1 105 0 4 602 267 93 0 0 chr3R 2267974 2268017 -25637036 + (CCA)n Simple_repeat Simple_repeat 2 44 0 4 602 268 279 13 13 chr3R 2268017 2268060 -25636993 + (CAG)n Simple_repeat Simple_repeat 1 43 0 4 602 293 274 0 0 chr3R 2269841 2269936 -25635117 + (CAG)n Simple_repeat Simple_repeat 3 97 0 4 602 208 255 0 0 chr3R 2270367 2270418 -25634635 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 4 602 204 195 25 49 chr3R 2270533 2270614 -25634439 + T-rich Low_complexity Low_complexity 3 81 0 4 602 330 80 0 0 chr3R 2271433 2271483 -25633570 + (AATTG)n Simple_repeat Simple_repeat 5 54 0 4 602 33 25 0 0 chr3R 2271718 2271758 -25633295 + AT_rich Low_complexity Low_complexity 1 40 0 4 602 180 182 0 0 chr3R 2272525 2272569 -25632484 + (CAG)n Simple_repeat Simple_repeat 1 44 0 4 602 22 35 0 0 chr3R 2274066 2274095 -25630958 + AT_rich Low_complexity Low_complexity 1 29 0 4 602 26 0 0 0 chr3R 2274338 2274364 -25630689 + AT_rich Low_complexity Low_complexity 1 26 0 4 602 21 57 0 0 chr3R 2274786 2274821 -25630232 + AT_rich Low_complexity Low_complexity 1 35 0 4 602 23 105 0 0 chr3R 2274933 2275019 -25630034 + AT_rich Low_complexity Low_complexity 1 86 0 4 602 21 0 0 0 chr3R 2282518 2282539 -25622514 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 28 79 0 0 chr3R 2282603 2282666 -25622387 + AT_rich Low_complexity Low_complexity 1 63 0 4 602 203 0 37 0 chr3R 2284616 2284643 -25620410 + (CAATA)n Simple_repeat Simple_repeat 2 29 0 4 602 1946 112 26 12 chr3R 2286661 2287004 -25618049 - S_DM DNA Tc1 0 1736 1389 4 602 296 157 229 0 chr3R 2287474 2287544 -25617509 + DNAREP1_DM LINE Penelope 437 522 -72 4 602 32 57 0 0 chr3R 2287725 2287778 -25617275 + AT_rich Low_complexity Low_complexity 1 53 0 4 602 24 32 0 0 chr3R 2290784 2290815 -25614238 + AT_rich Low_complexity Low_complexity 1 31 0 4 602 23 33 0 0 chr3R 2291723 2291753 -25613300 + AT_rich Low_complexity Low_complexity 1 30 0 4 602 282 179 0 0 chr3R 2292559 2292615 -25612438 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 602 21 89 0 0 chr3R 2293149 2293205 -25611848 + AT_rich Low_complexity Low_complexity 1 56 0 4 602 224 131 0 21 chr3R 2293445 2293492 -25611561 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 602 27 0 0 0 chr3R 2296695 2296722 -25608331 + AT_rich Low_complexity Low_complexity 1 27 0 4 602 29 0 0 0 chr3R 2297605 2297634 -25607419 + AT_rich Low_complexity Low_complexity 1 29 0 4 602 198 143 0 0 chr3R 2298409 2298444 -25606609 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 602 25 0 0 0 chr3R 2298454 2298479 -25606574 + AT_rich Low_complexity Low_complexity 1 25 0 4 602 26 30 0 0 chr3R 2307997 2308030 -25597023 + AT_rich Low_complexity Low_complexity 1 33 0 4 602 216 198 0 69 chr3R 2310334 2310421 -25594632 + T-rich Low_complexity Low_complexity 3 83 0 4 602 31 26 0 0 chr3R 2312110 2312148 -25592905 + AT_rich Low_complexity Low_complexity 1 38 0 4 602 21 71 0 0 chr3R 2313596 2313638 -25591415 + AT_rich Low_complexity Low_complexity 1 42 0 4 602 23 68 0 0 chr3R 2313673 2313717 -25591336 + AT_rich Low_complexity Low_complexity 1 44 0 4 602 23 0 0 0 chr3R 2313732 2313755 -25591298 + AT_rich Low_complexity Low_complexity 1 23 0 4 602 25 90 0 0 chr3R 2313953 2314020 -25591033 + AT_rich Low_complexity Low_complexity 1 67 0 4 602 24 0 0 0 chr3R 2314996 2315020 -25590033 + AT_rich Low_complexity Low_complexity 1 24 0 4 602 23 0 0 0 chr3R 2315033 2315056 -25589997 + AT_rich Low_complexity Low_complexity 1 23 0 4 602 24 0 0 0 chr3R 2318182 2318206 -25586847 + AT_rich Low_complexity Low_complexity 1 24 0 4 602 303 246 208 24 chr3R 2321955 2322080 -25582973 - DNAREP1_DM LINE Penelope -127 467 320 4 602 228 111 0 0 chr3R 2332264 2332300 -25572753 + (TTCTG)n Simple_repeat Simple_repeat 2 37 0 4 602 201 39 0 0 chr3R 2332524 2332550 -25572503 + (TCC)n Simple_repeat Simple_repeat 1 26 0 4 602 28 71 0 0 chr3R 2333594 2333650 -25571403 + AT_rich Low_complexity Low_complexity 1 56 0 4 602 46690 5 0 1 chr3R 2335802 2340819 -25564234 + LINEJ1_DM LINE Jockey 6 5020 0 4 602 44 46 0 0 chr3R 2347734 2347799 -25557254 + AT_rich Low_complexity Low_complexity 1 65 0 4 602 189 0 0 0 chr3R 2349775 2349796 -25555257 + (CTG)n Simple_repeat Simple_repeat 3 23 0 4 602 21 0 0 0 chr3R 2350775 2350796 -25554257 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 270 0 0 0 chr3R 2351266 2351296 -25553757 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 602 22 0 0 0 chr3R 2354435 2354457 -25550596 + AT_rich Low_complexity Low_complexity 1 22 0 4 602 186 43 0 0 chr3R 2354786 2354809 -25550244 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 4 602 203 61 0 29 chr3R 2355988 2356022 -25549031 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 4 602 234 62 0 0 chr3R 2356608 2356640 -25548413 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 603 23 54 0 0 chr3R 2359719 2359756 -25545297 + AT_rich Low_complexity Low_complexity 1 37 0 4 603 345 167 57 45 chr3R 2360332 2360420 -25544633 - DNAREP1_DM LINE Penelope -104 490 402 4 603 357 194 0 0 chr3R 2360557 2360619 -25544434 - DNAREP1_DM LINE Penelope -528 66 5 4 603 297 0 0 0 chr3R 2361305 2361338 -25543715 + (CAGAA)n Simple_repeat Simple_repeat 3 35 0 4 603 24 0 0 0 chr3R 2365690 2365714 -25539339 + AT_rich Low_complexity Low_complexity 1 24 0 4 603 28 0 0 0 chr3R 2373022 2373050 -25532003 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 286 335 6 6 chr3R 2374942 2375113 -25529940 + (CTG)n Simple_repeat Simple_repeat 3 173 0 4 603 24 0 0 0 chr3R 2380999 2381023 -25524030 + AT_rich Low_complexity Low_complexity 1 24 0 4 603 192 97 0 0 chr3R 2383134 2383165 -25521888 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 603 21 36 0 0 chr3R 2384351 2384379 -25520674 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 23 0 0 0 chr3R 2386065 2386088 -25518965 + AT_rich Low_complexity Low_complexity 1 23 0 4 603 243 0 0 0 chr3R 2392734 2392761 -25512292 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 603 25 0 0 0 chr3R 2395375 2395400 -25509653 + AT_rich Low_complexity Low_complexity 1 25 0 4 603 26 0 0 0 chr3R 2398007 2398033 -25507020 + AT_rich Low_complexity Low_complexity 1 26 0 4 603 26 30 0 0 chr3R 2399484 2399517 -25505536 + AT_rich Low_complexity Low_complexity 1 33 0 4 603 21 36 0 0 chr3R 2404326 2404354 -25500699 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 30 27 0 0 chr3R 2410909 2410946 -25494107 + AT_rich Low_complexity Low_complexity 1 37 0 4 603 22 0 0 0 chr3R 2411947 2411969 -25493084 + AT_rich Low_complexity Low_complexity 1 22 0 4 603 21 0 0 0 chr3R 2414089 2414110 -25490943 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 26 0 0 0 chr3R 2415277 2415303 -25489750 + AT_rich Low_complexity Low_complexity 1 26 0 4 603 22 35 0 0 chr3R 2418326 2418355 -25486698 + AT_rich Low_complexity Low_complexity 1 29 0 4 603 50 42 0 0 chr3R 2420045 2420116 -25484937 + AT_rich Low_complexity Low_complexity 1 71 0 4 603 198 103 0 0 chr3R 2422407 2422436 -25482617 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 603 21 0 0 0 chr3R 2425628 2425649 -25479404 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 21 36 0 0 chr3R 2427074 2427102 -25477951 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 800 133 8 0 chr3R 2428100 2428228 -25476825 + DNAREP1_DM LINE Penelope 1 129 -465 4 603 1154 142 162 33 chr3R 2428228 2428469 -25476584 + DNAREP1_DM LINE Penelope 323 594 0 4 603 30 59 0 0 chr3R 2428806 2428857 -25476196 + AT_rich Low_complexity Low_complexity 1 51 0 4 603 23 33 0 0 chr3R 2431190 2431220 -25473833 + AT_rich Low_complexity Low_complexity 1 30 0 4 603 219 133 0 0 chr3R 2435258 2435303 -25469750 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 603 263 167 133 0 chr3R 2438228 2438288 -25466765 + DNAREP1_DM LINE Penelope 370 437 -157 4 603 192 111 0 0 chr3R 2438734 2438770 -25466283 + (TTGG)n Simple_repeat Simple_repeat 1 36 0 4 603 21 0 0 0 chr3R 2439379 2439400 -25465653 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 28 0 0 0 chr3R 2441099 2441127 -25463926 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 246 62 0 0 chr3R 2443067 2443099 -25461954 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 603 34 24 0 0 chr3R 2443661 2443702 -25461351 + AT_rich Low_complexity Low_complexity 1 41 0 4 603 21 0 0 0 chr3R 2443729 2443750 -25461303 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 200 170 43 0 chr3R 2447055 2447102 -25457951 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 603 230 241 0 0 chr3R 2447122 2447201 -25457852 + GA-rich Low_complexity Low_complexity 1 79 0 4 603 402 85 0 0 chr3R 2447632 2447691 -25457362 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 603 192 40 0 0 chr3R 2447982 2448007 -25457046 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 603 198 208 0 0 chr3R 2449176 2449229 -25455824 + T-rich Low_complexity Low_complexity 1 53 0 4 603 21 0 0 0 chr3R 2450176 2450197 -25454856 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 318 277 0 0 chr3R 2453482 2453601 -25451452 + T-rich Low_complexity Low_complexity 1 119 0 4 603 267 148 0 62 chr3R 2462046 2462111 -25442942 + ROO_I LTR Pao 656 716 -7540 4 603 272 266 13 0 chr3R 2462268 2462347 -25442706 + ROO_I LTR Pao 664 743 -7513 4 603 197 137 39 0 chr3R 2465450 2465501 -25439552 + (TGGA)n Simple_repeat Simple_repeat 3 55 0 4 603 1508 96 171 61 chr3R 2466632 2466942 -25438111 - DMRP1 Unknown Unknown -2 344 1 4 603 216 149 43 0 chr3R 2467707 2467754 -25437299 + A-rich Low_complexity Low_complexity 4 52 0 4 603 876 213 128 24 chr3R 2470284 2470534 -25434519 - DNAREP1_DM LINE Penelope -2 592 317 4 603 37 52 0 0 chr3R 2472034 2472092 -25432961 + AT_rich Low_complexity Low_complexity 1 58 0 4 603 23 0 0 0 chr3R 2472417 2472440 -25432613 + AT_rich Low_complexity Low_complexity 1 23 0 4 603 21 71 0 0 chr3R 2481724 2481766 -25423287 + AT_rich Low_complexity Low_complexity 1 42 0 4 603 21 57 0 0 chr3R 2483305 2483340 -25421713 + AT_rich Low_complexity Low_complexity 1 35 0 4 603 31 0 0 0 chr3R 2485982 2486013 -25419040 + AT_rich Low_complexity Low_complexity 1 31 0 4 603 29 28 0 0 chr3R 2486411 2486447 -25418606 + AT_rich Low_complexity Low_complexity 1 36 0 4 603 22 35 0 0 chr3R 2488087 2488116 -25416937 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 36 0 0 0 chr3R 2490744 2490780 -25414273 + AT_rich Low_complexity Low_complexity 1 36 0 4 604 203 171 0 0 chr3R 2492131 2492172 -25412881 + (CAA)n Simple_repeat Simple_repeat 3 43 0 4 604 219 229 0 32 chr3R 2494287 2494350 -25410703 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 604 22 0 0 0 chr3R 2495252 2495274 -25409779 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 279 200 0 0 chr3R 2498304 2498354 -25406699 - DNAREP1_DM LINE Penelope -535 59 10 4 604 222 136 0 0 chr3R 2498502 2498546 -25406507 + (TTCGG)n Simple_repeat Simple_repeat 1 44 0 4 604 23 0 0 0 chr3R 2500407 2500430 -25404623 + AT_rich Low_complexity Low_complexity 1 23 0 4 604 180 158 0 0 chr3R 2503094 2503132 -25401921 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 604 228 122 0 0 chr3R 2503734 2503775 -25401278 + (CTG)n Simple_repeat Simple_repeat 3 43 0 4 604 222 194 0 0 chr3R 2503874 2503946 -25401107 + (CTG)n Simple_repeat Simple_repeat 3 74 0 4 604 449 138 0 36 chr3R 2506511 2506594 -25398459 - DNAREP1_DM LINE Penelope 0 594 515 4 604 189 74 0 0 chr3R 2506939 2506966 -25398087 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 604 22 35 0 0 chr3R 2508220 2508249 -25396804 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 189 94 0 0 chr3R 2508282 2508314 -25396739 + (TTTAA)n Simple_repeat Simple_repeat 1 32 0 4 604 33 56 0 0 chr3R 2509412 2509466 -25395587 + AT_rich Low_complexity Low_complexity 1 54 0 4 604 3414 32 71 3 chr3R 2510923 2511529 -25393524 + G4_DM LINE Jockey 3180 3856 0 4 604 468 318 0 0 chr3R 2513022 2513195 -25391858 + (CCG)n Simple_repeat Simple_repeat 3 175 0 4 604 201 40 120 0 chr3R 2514576 2514626 -25390427 + (TCCG)n Simple_repeat Simple_repeat 4 59 0 4 604 29 0 0 0 chr3R 2518069 2518098 -25386955 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 31 0 0 0 chr3R 2519249 2519280 -25385773 + AT_rich Low_complexity Low_complexity 1 31 0 4 604 21 71 0 0 chr3R 2519452 2519494 -25385559 + AT_rich Low_complexity Low_complexity 1 42 0 4 604 29 0 0 0 chr3R 2519630 2519659 -25385394 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 22 0 0 0 chr3R 2522783 2522805 -25382248 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 27 0 0 0 chr3R 2523510 2523537 -25381516 + AT_rich Low_complexity Low_complexity 1 27 0 4 604 24 0 0 0 chr3R 2523576 2523600 -25381453 + AT_rich Low_complexity Low_complexity 1 24 0 4 604 21 0 0 0 chr3R 2530597 2530618 -25374435 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 207 0 0 0 chr3R 2531365 2531388 -25373665 + (CATTC)n Simple_repeat Simple_repeat 1 23 0 4 604 254 211 0 0 chr3R 2531731 2531783 -25373270 + DNAREP1_DM LINE Penelope 1 52 -542 4 604 329 169 31 0 chr3R 2531855 2531920 -25373133 + DNAREP1_DM LINE Penelope 528 594 0 4 604 22 0 0 0 chr3R 2532576 2532598 -25372455 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 29 0 0 0 chr3R 2534493 2534522 -25370531 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 251 203 0 0 chr3R 2535496 2535560 -25369493 + (TGG)n Simple_repeat Simple_repeat 1 64 0 4 604 303 157 0 0 chr3R 2535757 2535827 -25369226 + (CTG)n Simple_repeat Simple_repeat 2 71 0 4 604 21 82 0 0 chr3R 2536121 2536170 -25368883 + AT_rich Low_complexity Low_complexity 1 49 0 4 604 27 49 0 0 chr3R 2538290 2538331 -25366722 + AT_rich Low_complexity Low_complexity 1 41 0 4 604 186 43 0 0 chr3R 2540537 2540560 -25364493 + (CCCGAA)n Simple_repeat Simple_repeat 1 23 0 4 604 26 0 0 0 chr3R 2546043 2546069 -25358984 + AT_rich Low_complexity Low_complexity 1 26 0 4 604 21 95 0 0 chr3R 2548256 2548319 -25356734 + AT_rich Low_complexity Low_complexity 1 63 0 4 604 222 227 0 0 chr3R 2550048 2550092 -25354961 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 604 198 0 0 0 chr3R 2553763 2553785 -25351268 + (ATG)n Simple_repeat Simple_repeat 1 22 0 4 604 23 92 0 0 chr3R 2554788 2554853 -25350200 + AT_rich Low_complexity Low_complexity 1 65 0 4 604 21 0 0 0 chr3R 2557881 2557902 -25347151 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 22 0 0 0 chr3R 2559165 2559187 -25345866 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 21 0 0 0 chr3R 2562891 2562912 -25342141 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 15921 2 0 1 chr3R 2563275 2565005 -25340048 - DOC LINE Jockey -1 4724 2997 4 604 53 40 0 0 chr3R 2566092 2566166 -25338887 + AT_rich Low_complexity Low_complexity 1 74 0 4 604 23 0 0 0 chr3R 2567655 2567678 -25337375 + AT_rich Low_complexity Low_complexity 1 23 0 4 604 24 0 0 0 chr3R 2570256 2570280 -25334773 + AT_rich Low_complexity Low_complexity 1 24 0 4 604 23 33 0 0 chr3R 2574434 2574464 -25330589 + AT_rich Low_complexity Low_complexity 1 30 0 4 604 28 29 0 0 chr3R 2574511 2574546 -25330507 + AT_rich Low_complexity Low_complexity 1 35 0 4 604 25 31 0 0 chr3R 2574563 2574595 -25330458 + AT_rich Low_complexity Low_complexity 1 32 0 4 604 21 0 0 0 chr3R 2576539 2576560 -25328493 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 21 0 0 0 chr3R 2577517 2577538 -25327515 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 197 83 0 27 chr3R 2577860 2577897 -25327156 + (CACAC)n Simple_repeat Simple_repeat 1 36 0 4 604 202 273 0 0 chr3R 2578328 2578372 -25326681 + CT-rich Low_complexity Low_complexity 1 44 0 4 604 295 257 9 9 chr3R 2583504 2583614 -25321439 + (CTG)n Simple_repeat Simple_repeat 1 110 0 4 604 227 282 0 0 chr3R 2584877 2584948 -25320105 + G-rich Low_complexity Low_complexity 1 71 0 4 604 24 53 0 0 chr3R 2585671 2585709 -25319344 + AT_rich Low_complexity Low_complexity 1 38 0 4 604 313 22 43 0 chr3R 2592438 2592484 -25312569 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 604 185 97 31 46 chr3R 2592490 2592555 -25312498 + (TAA)n Simple_repeat Simple_repeat 3 66 0 4 604 22 0 0 0 chr3R 2594622 2594644 -25310409 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 180 97 0 0 chr3R 2595546 2595577 -25309476 + (TAA)n Simple_repeat Simple_repeat 3 33 0 4 604 31 44 0 0 chr3R 2605569 2605614 -25299439 + AT_rich Low_complexity Low_complexity 1 45 0 4 604 704 157 165 45 chr3R 2607827 2608027 -25297026 - DNAREP1_DM LINE Penelope -29 565 342 4 604 263 241 0 0 chr3R 2610230 2610288 -25294765 + DNAREP1_DM LINE Penelope 2 59 -535 4 604 31 26 0 0 chr3R 2610296 2610334 -25294719 + AT_rich Low_complexity Low_complexity 1 38 0 4 604 735 148 153 47 chr3R 2610334 2610504 -25294549 + DNAREP1_DM LINE Penelope 407 594 0 4 604 39 84 0 0 chr3R 2610545 2610640 -25294413 + AT_rich Low_complexity Low_complexity 1 95 0 4 604 29 47 0 0 chr3R 2614054 2614097 -25290956 + AT_rich Low_complexity Low_complexity 1 43 0 4 604 22 0 0 0 chr3R 2617101 2617123 -25287930 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 26 20 0 58 chr3R 2617139 2617191 -25287862 + AT_rich Low_complexity Low_complexity 1 49 0 4 604 58 0 0 0 chr3R 2618940 2618998 -25286055 + AT_rich Low_complexity Low_complexity 1 58 0 4 604 22 35 0 0 chr3R 2620865 2620894 -25284159 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 240 111 0 0 chr3R 2622662 2622698 -25282355 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 605 270 132 0 0 chr3R 2627009 2627062 -25277991 + (CAG)n Simple_repeat Simple_repeat 2 54 0 4 605 315 280 34 8 chr3R 2627454 2627573 -25277480 + ROO_I LTR Pao 641 762 -7494 4 605 23 54 0 0 chr3R 2631071 2631108 -25273945 + AT_rich Low_complexity Low_complexity 1 37 0 4 605 22 35 0 0 chr3R 2633098 2633127 -25271926 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 21 71 0 0 chr3R 2633652 2633694 -25271359 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 276 120 0 0 chr3R 2636552 2636602 -25268451 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 605 208 234 0 0 chr3R 2640958 2641005 -25264048 + (CACCAT)n Simple_repeat Simple_repeat 6 52 0 4 605 242 207 0 17 chr3R 2641590 2641649 -25263404 + (CCCA)n Simple_repeat Simple_repeat 2 59 0 4 605 27 0 0 0 chr3R 2642723 2642750 -25262303 + AT_rich Low_complexity Low_complexity 1 27 0 4 605 24 67 0 0 chr3R 2645190 2645235 -25259818 + AT_rich Low_complexity Low_complexity 1 45 0 4 605 26 64 0 0 chr3R 2645454 2645501 -25259552 + AT_rich Low_complexity Low_complexity 1 47 0 4 605 35 41 0 0 chr3R 2645736 2645785 -25259268 + AT_rich Low_complexity Low_complexity 1 49 0 4 605 532 269 93 16 chr3R 2646397 2646629 -25258424 + BS2 LINE Jockey 4388 4589 -132 4 605 25 51 0 0 chr3R 2646744 2646783 -25258270 + AT_rich Low_complexity Low_complexity 1 39 0 4 605 25 51 0 0 chr3R 2647589 2647628 -25257425 + AT_rich Low_complexity Low_complexity 1 39 0 4 605 532 269 93 16 chr3R 2647743 2647975 -25257078 - BS2 LINE Jockey -132 4589 4388 4 605 35 41 0 0 chr3R 2648587 2648636 -25256417 + AT_rich Low_complexity Low_complexity 1 49 0 4 605 23 0 0 0 chr3R 2651470 2651493 -25253560 + AT_rich Low_complexity Low_complexity 1 23 0 4 605 195 69 0 0 chr3R 2654318 2654347 -25250706 + (GGATG)n Simple_repeat Simple_repeat 5 33 0 4 605 198 0 0 0 chr3R 2657178 2657200 -25247853 + (A)n Simple_repeat Simple_repeat 1 22 0 4 605 27 29 0 0 chr3R 2665922 2665956 -25239097 + AT_rich Low_complexity Low_complexity 1 34 0 4 605 24 0 0 0 chr3R 2666271 2666295 -25238758 + AT_rich Low_complexity Low_complexity 1 24 0 4 605 231 146 0 0 chr3R 2667301 2667342 -25237711 + (TTG)n Simple_repeat Simple_repeat 1 41 0 4 605 244 175 0 127 chr3R 2667418 2667536 -25237517 - ROO_I LTR Pao -7513 743 641 4 605 199 29 56 28 chr3R 2670218 2670254 -25234799 + (GAGAA)n Simple_repeat Simple_repeat 4 40 0 4 605 30 59 0 0 chr3R 2673222 2673273 -25231780 + AT_rich Low_complexity Low_complexity 1 51 0 4 605 21 71 0 0 chr3R 2674850 2674892 -25230161 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 48 18 0 0 chr3R 2674967 2675022 -25230031 + AT_rich Low_complexity Low_complexity 1 55 0 4 605 24 0 0 0 chr3R 2676590 2676614 -25228439 + AT_rich Low_complexity Low_complexity 1 24 0 4 605 25 31 0 0 chr3R 2676870 2676902 -25228151 + AT_rich Low_complexity Low_complexity 1 32 0 4 605 561 164 218 52 chr3R 2682472 2682646 -25222407 + DNAREP1_DM LINE Penelope 392 594 0 4 605 22 35 0 0 chr3R 2682709 2682738 -25222315 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 35 78 0 0 chr3R 2684042 2684119 -25220934 + AT_rich Low_complexity Low_complexity 1 77 0 4 605 242 79 0 60 chr3R 2684122 2684189 -25220864 + (TTATA)n Simple_repeat Simple_repeat 2 64 0 4 605 35 0 0 0 chr3R 2684208 2684243 -25220810 + AT_rich Low_complexity Low_complexity 1 35 0 4 605 27 73 0 0 chr3R 2684324 2684379 -25220674 + AT_rich Low_complexity Low_complexity 1 55 0 4 605 25 95 0 0 chr3R 2684448 2684522 -25220531 + AT_rich Low_complexity Low_complexity 1 74 0 4 605 1382 0 0 13 chr3R 2686786 2686941 -25218112 + FUSHI_DM Unknown Unknown 3 155 -2 4 605 689 185 22 22 chr3R 2686965 2687103 -25217950 + FUSHI_DM Unknown Unknown 4 141 -16 4 605 246 236 0 0 chr3R 2688817 2688872 -25216181 - PENELOPE LINE Penelope -116 4045 3991 4 605 23 33 0 0 chr3R 2689220 2689250 -25215803 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 670 0 0 0 chr3R 2689995 2690067 -25214986 + FTZ_DM Unknown Unknown 1 72 0 4 605 26 0 0 0 chr3R 2693005 2693031 -25212022 + AT_rich Low_complexity Low_complexity 1 26 0 4 605 384 164 0 0 chr3R 2693332 2693399 -25211654 - DNAREP1_DM LINE Penelope 0 594 528 4 605 259 206 221 0 chr3R 2693450 2693518 -25211535 - DNAREP1_DM LINE Penelope -510 84 2 4 605 23 54 0 0 chr3R 2696848 2696885 -25208168 + AT_rich Low_complexity Low_complexity 1 37 0 4 605 24 85 0 0 chr3R 2696903 2696962 -25208091 + AT_rich Low_complexity Low_complexity 1 59 0 4 605 27 29 0 0 chr3R 2701771 2701805 -25203248 + AT_rich Low_complexity Low_complexity 1 34 0 4 605 30 0 0 0 chr3R 2702530 2702560 -25202493 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 225 94 0 0 chr3R 2703118 2703150 -25201903 + (A)n Simple_repeat Simple_repeat 1 32 0 4 605 23 33 0 0 chr3R 2704875 2704905 -25200148 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 202 29 0 54 chr3R 2708783 2708820 -25196233 + (CAAAC)n Simple_repeat Simple_repeat 5 39 0 4 605 28 79 0 0 chr3R 2710596 2710659 -25194394 + AT_rich Low_complexity Low_complexity 1 63 0 4 605 44 63 0 0 chr3R 2714062 2714141 -25190912 + AT_rich Low_complexity Low_complexity 1 79 0 4 605 26 93 0 0 chr3R 2715050 2715125 -25189928 + AT_rich Low_complexity Low_complexity 1 75 0 4 605 213 94 0 0 chr3R 2715348 2715380 -25189673 + (CCGAA)n Simple_repeat Simple_repeat 4 35 0 4 605 189 0 0 0 chr3R 2716887 2716908 -25188145 + (G)n Simple_repeat Simple_repeat 1 21 0 4 605 28 48 0 0 chr3R 2717299 2717341 -25187712 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 42 36 0 0 chr3R 2718321 2718377 -25186676 + AT_rich Low_complexity Low_complexity 1 56 0 4 605 38 51 0 0 chr3R 2718443 2718502 -25186551 + AT_rich Low_complexity Low_complexity 1 59 0 4 605 180 0 0 0 chr3R 2719796 2719816 -25185237 + (CATCG)n Simple_repeat Simple_repeat 2 21 0 4 605 24 0 0 0 chr3R 2720328 2720352 -25184701 + AT_rich Low_complexity Low_complexity 1 24 0 4 605 23 33 0 0 chr3R 2720781 2720811 -25184242 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 21 0 0 0 chr3R 2721873 2721894 -25183159 + AT_rich Low_complexity Low_complexity 1 21 0 4 605 36 40 0 0 chr3R 2721970 2722020 -25183033 + AT_rich Low_complexity Low_complexity 1 50 0 4 605 21 71 0 0 chr3R 2722297 2722339 -25182714 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 25 51 0 0 chr3R 2723380 2723419 -25181634 + AT_rich Low_complexity Low_complexity 1 39 0 4 605 22 0 0 0 chr3R 2723553 2723575 -25181478 + AT_rich Low_complexity Low_complexity 1 22 0 4 605 222 222 0 0 chr3R 2724408 2724462 -25180591 + T-rich Low_complexity Low_complexity 1 54 0 4 605 27 62 0 0 chr3R 2724791 2724839 -25180214 + AT_rich Low_complexity Low_complexity 1 48 0 4 605 185 154 26 0 chr3R 2725090 2725129 -25179924 + (TCCG)n Simple_repeat Simple_repeat 2 41 0 4 605 183 139 0 0 chr3R 2725836 2725872 -25179181 + (T)n Simple_repeat Simple_repeat 1 36 0 4 605 278 183 0 31 chr3R 2735209 2735305 -25169748 + (CTG)n Simple_repeat Simple_repeat 1 93 0 4 605 200 141 77 15 chr3R 2738447 2738512 -25166541 + (TTAA)n Simple_repeat Simple_repeat 1 69 0 4 605 288 53 0 0 chr3R 2741394 2741432 -25163621 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 605 189 0 0 0 chr3R 2742183 2742204 -25162849 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 4 605 26 30 0 0 chr3R 2743785 2743818 -25161235 + AT_rich Low_complexity Low_complexity 1 33 0 4 605 208 237 17 17 chr3R 2744839 2744899 -25160154 + (CAG)n Simple_repeat Simple_repeat 3 62 0 4 605 21 36 0 0 chr3R 2747188 2747216 -25157837 + AT_rich Low_complexity Low_complexity 1 28 0 4 605 26 0 0 0 chr3R 2747775 2747801 -25157252 + AT_rich Low_complexity Low_complexity 1 26 0 4 605 29 0 0 0 chr3R 2748561 2748590 -25156463 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 22 56 0 0 chr3R 2748700 2748736 -25156317 + AT_rich Low_complexity Low_complexity 1 36 0 4 605 208 231 0 0 chr3R 2748891 2748943 -25156110 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 605 219 36 0 0 chr3R 2749778 2749806 -25155247 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 605 22 35 0 0 chr3R 2750319 2750348 -25154705 + AT_rich Low_complexity Low_complexity 1 29 0 4 606 238 227 0 43 chr3R 2752813 2752905 -25152148 + ROO_I LTR Pao 658 745 -7511 4 606 235 169 43 71 chr3R 2754510 2754580 -25150473 + DM1731_LTR LTR Copia 76 143 -193 4 606 212 229 12 24 chr3R 2759466 2759551 -25145502 + (TAAA)n Simple_repeat Simple_repeat 4 87 0 4 606 23 0 0 0 chr3R 2759869 2759892 -25145161 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 267 79 0 0 chr3R 2763293 2763331 -25141722 + (CCGAA)n Simple_repeat Simple_repeat 1 38 0 4 606 27 0 0 0 chr3R 2766428 2766455 -25138598 + AT_rich Low_complexity Low_complexity 1 27 0 4 606 237 65 0 0 chr3R 2768320 2768351 -25136702 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 606 32 0 0 0 chr3R 2768811 2768843 -25136210 + AT_rich Low_complexity Low_complexity 1 32 0 4 606 22 0 0 0 chr3R 2770331 2770353 -25134700 + AT_rich Low_complexity Low_complexity 1 22 0 4 606 24 53 0 0 chr3R 2775281 2775319 -25129734 + AT_rich Low_complexity Low_complexity 1 38 0 4 606 213 205 0 0 chr3R 2777781 2777820 -25127233 + (TTCGG)n Simple_repeat Simple_repeat 3 41 0 4 606 25 0 0 0 chr3R 2780564 2780589 -25124464 + AT_rich Low_complexity Low_complexity 1 25 0 4 606 207 0 0 0 chr3R 2782526 2782549 -25122504 + (TCTCCC)n Simple_repeat Simple_repeat 6 28 0 4 606 229 196 22 0 chr3R 2785732 2785778 -25119275 + (ATG)n Simple_repeat Simple_repeat 1 47 0 4 606 210 71 0 0 chr3R 2787382 2787410 -25117643 + (TCCG)n Simple_repeat Simple_repeat 2 29 0 4 606 23 0 0 0 chr3R 2791175 2791198 -25113855 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 21 71 0 0 chr3R 2791940 2791982 -25113071 + AT_rich Low_complexity Low_complexity 1 42 0 4 606 35 24 0 0 chr3R 2793071 2793113 -25111940 + AT_rich Low_complexity Low_complexity 1 42 0 4 606 24 53 0 0 chr3R 2796571 2796609 -25108444 + AT_rich Low_complexity Low_complexity 1 38 0 4 606 24 53 0 0 chr3R 2797540 2797578 -25107475 + AT_rich Low_complexity Low_complexity 1 38 0 4 606 210 212 25 12 chr3R 2801268 2801349 -25103704 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 606 242 191 0 0 chr3R 2801494 2801541 -25103512 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 606 25 31 0 0 chr3R 2803611 2803643 -25101410 + AT_rich Low_complexity Low_complexity 1 32 0 4 606 183 42 0 0 chr3R 2804154 2804178 -25100875 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 606 23 33 0 0 chr3R 2806631 2806661 -25098392 + AT_rich Low_complexity Low_complexity 1 30 0 4 606 27 0 0 0 chr3R 2807450 2807477 -25097576 + AT_rich Low_complexity Low_complexity 1 27 0 4 606 229 169 0 33 chr3R 2807953 2808014 -25097039 + A-rich Low_complexity Low_complexity 3 61 0 4 606 240 122 0 0 chr3R 2808945 2808986 -25096067 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 606 23 0 0 0 chr3R 2809068 2809091 -25095962 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 24 32 0 0 chr3R 2809355 2809386 -25095667 + AT_rich Low_complexity Low_complexity 1 31 0 4 606 25 0 0 0 chr3R 2814707 2814732 -25090321 + AT_rich Low_complexity Low_complexity 1 25 0 4 606 23 0 0 0 chr3R 2815406 2815429 -25089624 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 261 0 0 0 chr3R 2815977 2816006 -25089047 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 606 23 0 0 0 chr3R 2816329 2816352 -25088701 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 216 0 0 0 chr3R 2816696 2816720 -25088333 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 4 606 25 65 0 0 chr3R 2817166 2817212 -25087841 + AT_rich Low_complexity Low_complexity 1 46 0 4 606 228 86 0 0 chr3R 2818479 2818514 -25086539 + (T)n Simple_repeat Simple_repeat 1 35 0 4 606 214 147 0 0 chr3R 2820289 2820323 -25084730 + (CCGAG)n Simple_repeat Simple_repeat 5 38 0 4 606 40 0 0 0 chr3R 2821402 2821442 -25083611 + AT_rich Low_complexity Low_complexity 1 40 0 4 606 255 133 0 0 chr3R 2822892 2822937 -25082116 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 606 24 0 0 0 chr3R 2823542 2823566 -25081487 + AT_rich Low_complexity Low_complexity 1 24 0 4 606 223 314 10 0 chr3R 2824056 2824158 -25080895 + T-rich Low_complexity Low_complexity 1 103 0 4 606 273 57 0 0 chr3R 2824723 2824758 -25080295 + (CAGTT)n Simple_repeat Simple_repeat 2 36 0 4 606 763 215 66 38 chr3R 2827368 2827581 -25077472 - DNAREP1_DM LINE Penelope -6 588 370 4 606 29 0 0 0 chr3R 2829891 2829920 -25075133 + AT_rich Low_complexity Low_complexity 1 29 0 4 606 323 82 27 27 chr3R 2830985 2831060 -25073993 + (TAA)n Simple_repeat Simple_repeat 3 77 0 4 606 206 250 0 0 chr3R 2831912 2831964 -25073089 + T-rich Low_complexity Low_complexity 1 52 0 4 606 195 42 0 0 chr3R 2832884 2832908 -25072145 + (CCA)n Simple_repeat Simple_repeat 1 24 0 4 606 39 22 0 0 chr3R 2835610 2835656 -25069397 + AT_rich Low_complexity Low_complexity 1 46 0 4 606 35 0 0 0 chr3R 2835732 2835767 -25069286 + AT_rich Low_complexity Low_complexity 1 35 0 4 606 186 150 0 0 chr3R 2836973 2837013 -25068040 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 606 31 0 0 0 chr3R 2839817 2839848 -25065205 + AT_rich Low_complexity Low_complexity 1 31 0 4 606 22 0 0 0 chr3R 2839963 2839985 -25065068 + AT_rich Low_complexity Low_complexity 1 22 0 4 606 205 290 0 11 chr3R 2840056 2840150 -25064903 + (CAA)n Simple_repeat Simple_repeat 1 93 0 4 606 21 36 0 0 chr3R 2840414 2840442 -25064611 + AT_rich Low_complexity Low_complexity 1 28 0 4 606 23 0 0 0 chr3R 2841595 2841618 -25063435 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 220 196 0 0 chr3R 2844173 2844219 -25060834 + (CAG)n Simple_repeat Simple_repeat 3 48 0 4 606 326 61 0 20 chr3R 2845365 2845415 -25059638 + (CAAAC)n Simple_repeat Simple_repeat 3 51 0 4 606 228 111 0 0 chr3R 2845689 2845725 -25059328 + (GAGTG)n Simple_repeat Simple_repeat 3 38 0 4 606 25 65 0 0 chr3R 2846648 2846694 -25058359 + AT_rich Low_complexity Low_complexity 1 46 0 4 606 183 100 0 0 chr3R 2846985 2847015 -25058038 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 4 606 21 0 0 0 chr3R 2849287 2849308 -25055745 + AT_rich Low_complexity Low_complexity 1 21 0 4 606 25 31 0 0 chr3R 2854838 2854870 -25050183 + AT_rich Low_complexity Low_complexity 1 32 0 4 606 324 48 0 0 chr3R 2855154 2855196 -25049857 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 606 23 0 0 0 chr3R 2855605 2855628 -25049425 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 205 186 0 0 chr3R 2856979 2857022 -25048031 + T-rich Low_complexity Low_complexity 1 43 0 4 606 237 132 0 0 chr3R 2858204 2858242 -25046811 + (TCCG)n Simple_repeat Simple_repeat 4 41 0 4 606 26 74 0 0 chr3R 2862188 2862242 -25042811 + AT_rich Low_complexity Low_complexity 1 54 0 4 606 295 79 0 0 chr3R 2864299 2864337 -25040716 - DNAREP1_DM LINE Penelope -537 57 20 4 606 1001 112 95 0 chr3R 2865752 2865921 -25039132 - DNAREP1_DM LINE Penelope -1 593 409 4 606 507 115 0 0 chr3R 2865900 2865978 -25039075 - DNAREP1_DM LINE Penelope -484 110 33 4 606 22 35 0 0 chr3R 2866048 2866077 -25038976 + AT_rich Low_complexity Low_complexity 1 29 0 4 606 21 0 0 0 chr3R 2866458 2866479 -25038574 + AT_rich Low_complexity Low_complexity 1 21 0 4 606 739 163 168 6 chr3R 2867157 2867330 -25037723 - DNAREP1_DM LINE Penelope 0 594 394 4 606 22 56 0 0 chr3R 2868882 2868918 -25036135 + AT_rich Low_complexity Low_complexity 1 36 0 4 606 25 90 0 0 chr3R 2871418 2871485 -25033568 + AT_rich Low_complexity Low_complexity 1 67 0 4 606 180 77 0 0 chr3R 2871485 2871511 -25033542 + (T)n Simple_repeat Simple_repeat 1 26 0 4 606 181 77 0 71 chr3R 2872936 2872978 -25032075 + (CATA)n Simple_repeat Simple_repeat 2 40 0 4 606 27 0 0 0 chr3R 2873981 2874008 -25031045 + AT_rich Low_complexity Low_complexity 1 27 0 4 606 34 42 0 0 chr3R 2876442 2876490 -25028563 + AT_rich Low_complexity Low_complexity 1 48 0 4 606 186 43 0 0 chr3R 2876695 2876718 -25028335 + (CAG)n Simple_repeat Simple_repeat 1 23 0 4 606 1525 107 76 22 chr3R 2877709 2877986 -25027067 - DMRP1 Unknown Unknown -6 340 49 4 607 25 31 0 0 chr3R 2886043 2886075 -25018978 + AT_rich Low_complexity Low_complexity 1 32 0 4 607 200 111 0 22 chr3R 2886195 2886241 -25018812 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 607 435 91 0 15 chr3R 2886386 2886453 -25018600 - G5A_DM LINE Jockey 0 2841 2776 4 607 21 0 0 0 chr3R 2887842 2887863 -25017190 + AT_rich Low_complexity Low_complexity 1 21 0 4 607 28 61 0 0 chr3R 2906206 2906255 -24998798 + AT_rich Low_complexity Low_complexity 1 49 0 4 607 3150 32 111 3 chr3R 2906429 2907143 -24997910 - G4_DM LINE Jockey 0 3856 3066 4 607 32 0 0 0 chr3R 2907148 2907180 -24997873 + AT_rich Low_complexity Low_complexity 1 32 0 4 607 2631 115 199 4 chr3R 2907280 2907777 -24997276 - DNAREP1_DM LINE Penelope 0 594 1 4 607 23 0 0 0 chr3R 2907862 2907885 -24997168 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 234 0 0 0 chr3R 2909324 2909350 -24995703 + (T)n Simple_repeat Simple_repeat 1 26 0 4 607 201 133 0 0 chr3R 2914917 2914947 -24990106 + (CATA)n Simple_repeat Simple_repeat 3 32 0 4 607 214 154 51 0 chr3R 2915495 2915534 -24989519 + (CATA)n Simple_repeat Simple_repeat 4 44 0 4 607 192 152 0 0 chr3R 2915781 2915814 -24989239 + (CATA)n Simple_repeat Simple_repeat 3 35 0 4 607 448 202 175 57 chr3R 2916085 2916279 -24988774 + HOBO DNA hAT 5 221 -2795 4 607 3311 158 0 0 chr3R 2916318 2916863 -24988190 + HOBO DNA hAT 432 976 -2040 4 607 2908 131 0 0 chr3R 2916877 2917313 -24987740 + HOBO DNA hAT 463 898 -2118 4 607 22 35 0 0 chr3R 2917505 2917534 -24987519 + AT_rich Low_complexity Low_complexity 1 29 0 4 607 212 233 0 0 chr3R 2921387 2921430 -24983623 + (CTG)n Simple_repeat Simple_repeat 2 44 0 4 607 200 194 0 0 chr3R 2921818 2921854 -24983199 + (ACTG)n Simple_repeat Simple_repeat 4 39 0 4 607 333 200 31 10 chr3R 2922332 2922428 -24982625 - ROO_I LTR Pao -7507 749 652 4 607 260 225 27 40 chr3R 2922701 2922775 -24982278 - ROO_I LTR Pao -7529 727 655 4 607 240 172 0 0 chr3R 2923001 2923059 -24981994 + (TTG)n Simple_repeat Simple_repeat 1 58 0 4 607 23 68 0 0 chr3R 2923413 2923457 -24981596 + AT_rich Low_complexity Low_complexity 1 44 0 4 607 201 167 0 0 chr3R 2924857 2924893 -24980160 + (CTG)n Simple_repeat Simple_repeat 2 37 0 4 607 183 167 0 0 chr3R 2925436 2925478 -24979575 + (CTG)n Simple_repeat Simple_repeat 3 44 0 4 607 209 171 0 0 chr3R 2926132 2926167 -24978886 + (CTG)n Simple_repeat Simple_repeat 1 35 0 4 607 187 114 22 22 chr3R 2926177 2926222 -24978831 + (ATGGTG)n Simple_repeat Simple_repeat 3 47 0 4 607 198 0 0 0 chr3R 2926333 2926355 -24978698 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 607 236 230 0 51 chr3R 2927456 2927534 -24977519 - ROO_I LTR Pao -7513 743 670 4 607 38 68 0 0 chr3R 2928226 2928299 -24976754 + AT_rich Low_complexity Low_complexity 1 73 0 4 607 22 0 0 0 chr3R 2928924 2928946 -24976107 + AT_rich Low_complexity Low_complexity 1 22 0 4 607 200 194 0 75 chr3R 2929248 2929315 -24975738 + CT-rich Low_complexity Low_complexity 5 66 0 4 607 315 0 0 0 chr3R 2929388 2929423 -24975630 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 607 21 36 0 0 chr3R 2929723 2929751 -24975302 + AT_rich Low_complexity Low_complexity 1 28 0 4 607 183 186 0 0 chr3R 2933672 2933715 -24971338 + (TTG)n Simple_repeat Simple_repeat 1 43 0 4 607 21 57 0 0 chr3R 2935377 2935412 -24969641 + AT_rich Low_complexity Low_complexity 1 35 0 4 607 31 26 0 0 chr3R 2938440 2938478 -24966575 + AT_rich Low_complexity Low_complexity 1 38 0 4 607 28 0 0 0 chr3R 2939323 2939351 -24965702 + AT_rich Low_complexity Low_complexity 1 28 0 4 607 24 53 0 0 chr3R 2946948 2946986 -24958067 + AT_rich Low_complexity Low_complexity 1 38 0 4 607 509 0 16 0 chr3R 2947482 2947543 -24957510 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 607 23 0 0 0 chr3R 2948512 2948535 -24956518 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 21 0 0 0 chr3R 2952041 2952062 -24952991 + AT_rich Low_complexity Low_complexity 1 21 0 4 607 23 92 0 0 chr3R 2956597 2956662 -24948391 + AT_rich Low_complexity Low_complexity 1 65 0 4 607 23 0 0 0 chr3R 2957052 2957075 -24947978 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 30 69 0 0 chr3R 2960112 2960170 -24944883 + AT_rich Low_complexity Low_complexity 1 58 0 4 607 275 230 68 0 chr3R 2960915 2960989 -24944064 + PENELOPE LINE Penelope 3917 3995 -166 4 607 26 0 0 0 chr3R 2961006 2961032 -24944021 + AT_rich Low_complexity Low_complexity 1 26 0 4 607 21 57 0 0 chr3R 2962420 2962455 -24942598 + AT_rich Low_complexity Low_complexity 1 35 0 4 607 6499 89 18 17 chr3R 2965836 2966784 -24938269 + FB4_DM DNA Tc1 1809 2757 -1332 4 607 698 87 292 109 chr3R 2966830 2967080 -24937973 - DMRP1 Unknown Unknown -10 336 41 4 607 47 33 0 0 chr3R 2971896 2971957 -24933096 + AT_rich Low_complexity Low_complexity 1 61 0 4 607 29 0 0 0 chr3R 2976957 2976986 -24928067 + AT_rich Low_complexity Low_complexity 1 29 0 4 607 24 0 0 0 chr3R 2983680 2983704 -24921349 + AT_rich Low_complexity Low_complexity 1 24 0 4 607 23 33 0 0 chr3R 2983974 2984004 -24921049 + AT_rich Low_complexity Low_complexity 1 30 0 4 607 28 71 0 0 chr3R 2984752 2984808 -24920245 + AT_rich Low_complexity Low_complexity 1 56 0 4 607 185 94 0 30 chr3R 2985260 2985293 -24919760 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 607 200 125 0 24 chr3R 2987250 2987291 -24917762 + (ATTTG)n Simple_repeat Simple_repeat 2 41 0 4 607 31 58 0 0 chr3R 2991140 2991192 -24913861 + AT_rich Low_complexity Low_complexity 1 52 0 4 607 23 0 0 0 chr3R 2992576 2992599 -24912454 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 21 57 0 0 chr3R 2994388 2994423 -24910630 + AT_rich Low_complexity Low_complexity 1 35 0 4 607 23 33 0 0 chr3R 2999799 2999829 -24905224 + AT_rich Low_complexity Low_complexity 1 30 0 4 607 208 226 0 0 chr3R 3000738 3000791 -24904262 + GA-rich Low_complexity Low_complexity 3 55 0 4 607 23 33 0 0 chr3R 3001173 3001203 -24903850 + AT_rich Low_complexity Low_complexity 1 30 0 4 607 362 246 62 38 chr3R 3003557 3003689 -24901364 - DNAREP1_DM LINE Penelope -37 557 431 4 607 315 121 0 0 chr3R 3005934 3005992 -24899061 + (CAG)n Simple_repeat Simple_repeat 3 60 0 4 607 27 49 0 0 chr3R 3007099 3007140 -24897913 + AT_rich Low_complexity Low_complexity 1 41 0 4 607 270 204 0 0 chr3R 3010421 3010509 -24894544 + (CAT)n Simple_repeat Simple_repeat 3 90 0 4 607 22 35 0 0 chr3R 3012335 3012364 -24892689 + AT_rich Low_complexity Low_complexity 1 29 0 4 607 223 113 30 61 chr3R 3012505 3012571 -24892482 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 4 607 24 0 0 0 chr3R 3013440 3013464 -24891589 + AT_rich Low_complexity Low_complexity 1 24 0 4 607 26 30 0 0 chr3R 3013495 3013528 -24891525 + AT_rich Low_complexity Low_complexity 1 33 0 4 608 24 32 0 0 chr3R 3016314 3016345 -24888708 + AT_rich Low_complexity Low_complexity 1 31 0 4 608 26 50 0 0 chr3R 3019842 3019882 -24885171 + AT_rich Low_complexity Low_complexity 1 40 0 4 608 290 193 125 0 chr3R 3020006 3020094 -24884959 + BS LINE Jockey 2022 2120 -3006 4 608 241 167 0 165 chr3R 3020029 3020144 -24884909 + ROO_I LTR Pao 644 739 -7517 4 608 241 127 0 40 chr3R 3021449 3021523 -24883530 + ROO_I LTR Pao 658 728 -7528 4 608 21 36 0 0 chr3R 3022588 3022616 -24882437 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 26 50 0 0 chr3R 3022920 3022960 -24882093 + AT_rich Low_complexity Low_complexity 1 40 0 4 608 223 151 65 75 chr3R 3023053 3023146 -24881907 + (CGAAT)n Simple_repeat Simple_repeat 3 94 0 4 608 228 264 11 22 chr3R 3023201 3023290 -24881763 + (TATATG)n Simple_repeat Simple_repeat 5 92 0 4 608 21 0 0 0 chr3R 3023453 3023474 -24881579 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 191 36 36 0 chr3R 3024259 3024287 -24880766 + (CTCA)n Simple_repeat Simple_repeat 1 29 0 4 608 327 85 0 0 chr3R 3024554 3024601 -24880452 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 608 54 0 0 0 chr3R 3025403 3025457 -24879596 + AT_rich Low_complexity Low_complexity 1 54 0 4 608 28 0 0 0 chr3R 3032360 3032388 -24872665 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 208 224 0 0 chr3R 3033813 3033862 -24871191 + (TGG)n Simple_repeat Simple_repeat 3 51 0 4 608 201 121 0 0 chr3R 3034150 3034183 -24870870 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 4 608 288 0 0 0 chr3R 3035222 3035254 -24869799 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 608 205 29 0 56 chr3R 3035472 3035508 -24869545 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 4 608 28 29 0 0 chr3R 3035540 3035575 -24869478 + AT_rich Low_complexity Low_complexity 1 35 0 4 608 22 35 0 0 chr3R 3038205 3038234 -24866819 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 180 77 0 0 chr3R 3039238 3039264 -24865789 + (CATCC)n Simple_repeat Simple_repeat 4 29 0 4 608 23 0 0 0 chr3R 3043020 3043043 -24862010 + AT_rich Low_complexity Low_complexity 1 23 0 4 608 25 0 0 0 chr3R 3047085 3047110 -24857943 + AT_rich Low_complexity Low_complexity 1 25 0 4 608 22 56 0 0 chr3R 3048188 3048224 -24856829 + AT_rich Low_complexity Low_complexity 1 36 0 4 608 22 0 0 0 chr3R 3050327 3050349 -24854704 + AT_rich Low_complexity Low_complexity 1 22 0 4 608 278 171 14 0 chr3R 3052549 3052619 -24852434 + (GTCTG)n Simple_repeat Simple_repeat 1 71 0 4 608 22 35 0 0 chr3R 3060109 3060138 -24844915 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 402 101 0 0 chr3R 3060776 3060845 -24844208 + (ACTG)n Simple_repeat Simple_repeat 4 72 0 4 608 22 70 0 0 chr3R 3066827 3066870 -24838183 + AT_rich Low_complexity Low_complexity 1 43 0 4 608 202 135 0 26 chr3R 3071996 3072034 -24833019 + CT-rich Low_complexity Low_complexity 2 38 0 4 608 24 0 0 0 chr3R 3075365 3075389 -24829664 + AT_rich Low_complexity Low_complexity 1 24 0 4 608 188 43 64 21 chr3R 3080193 3080240 -24824813 + (TTATA)n Simple_repeat Simple_repeat 3 51 0 4 608 26 50 0 0 chr3R 3081247 3081287 -24823766 + AT_rich Low_complexity Low_complexity 1 40 0 4 608 240 185 0 0 chr3R 3084323 3084377 -24820676 + A-rich Low_complexity Low_complexity 1 54 0 4 608 24 0 0 0 chr3R 3085096 3085120 -24819933 + AT_rich Low_complexity Low_complexity 1 24 0 4 608 357 93 0 0 chr3R 3085487 3085541 -24819512 + (CAGT)n Simple_repeat Simple_repeat 3 56 0 4 608 21 36 0 0 chr3R 3086932 3086960 -24818093 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 189 0 0 0 chr3R 3092237 3092258 -24812795 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 608 22 35 0 0 chr3R 3095625 3095654 -24809399 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 22 35 0 0 chr3R 3097155 3097184 -24807869 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 37 0 0 0 chr3R 3098759 3098796 -24806257 + AT_rich Low_complexity Low_complexity 1 37 0 4 608 700 191 156 85 chr3R 3100150 3100491 -24804562 + DNAREP1_DM LINE Penelope 27 495 -99 4 608 261 151 0 0 chr3R 3100847 3100900 -24804153 + (CTG)n Simple_repeat Simple_repeat 1 53 0 4 608 343 160 0 0 chr3R 3100931 3101025 -24804028 - ROO_I LTR Pao -7524 732 639 4 608 363 113 0 0 chr3R 3102824 3102886 -24802167 + (CTG)n Simple_repeat Simple_repeat 3 64 0 4 608 24 32 0 0 chr3R 3103288 3103319 -24801734 + AT_rich Low_complexity Low_complexity 1 31 0 4 608 25 75 0 0 chr3R 3106555 3106608 -24798445 + AT_rich Low_complexity Low_complexity 1 53 0 4 608 224 148 16 0 chr3R 3107940 3108001 -24797052 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 608 203 175 25 0 chr3R 3108291 3108331 -24796722 + (CAG)n Simple_repeat Simple_repeat 1 41 0 4 608 201 133 0 0 chr3R 3108646 3108676 -24796377 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 608 240 111 0 0 chr3R 3114323 3114359 -24790694 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 608 216 276 0 0 chr3R 3114564 3114622 -24790431 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 608 27 0 0 0 chr3R 3115503 3115530 -24789523 + AT_rich Low_complexity Low_complexity 1 27 0 4 608 189 0 0 0 chr3R 3115793 3115814 -24789239 + (A)n Simple_repeat Simple_repeat 1 21 0 4 608 263 288 0 0 chr3R 3119015 3119074 -24785979 + (CAG)n Simple_repeat Simple_repeat 3 61 0 4 608 21 36 0 0 chr3R 3119495 3119523 -24785530 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 192 200 0 0 chr3R 3121161 3121216 -24783837 + (TGGG)n Simple_repeat Simple_repeat 2 56 0 4 608 192 200 0 0 chr3R 3122907 3122947 -24782106 + (CAG)n Simple_repeat Simple_repeat 1 40 0 4 608 21 0 0 0 chr3R 3125925 3125946 -24779107 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 261 119 0 0 chr3R 3126508 3126550 -24778503 + (CGG)n Simple_repeat Simple_repeat 2 43 0 4 608 23 0 0 0 chr3R 3128659 3128682 -24776371 + AT_rich Low_complexity Low_complexity 1 23 0 4 608 215 277 0 15 chr3R 3129142 3129208 -24775845 + (TCCG)n Simple_repeat Simple_repeat 3 67 0 4 608 342 45 0 0 chr3R 3129323 3129367 -24775686 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 608 189 74 0 0 chr3R 3130960 3130987 -24774066 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 608 24 0 0 0 chr3R 3131596 3131620 -24773433 + AT_rich Low_complexity Low_complexity 1 24 0 4 608 21 0 0 0 chr3R 3132962 3132983 -24772070 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 198 171 0 0 chr3R 3133715 3133756 -24771297 + (CGG)n Simple_repeat Simple_repeat 1 41 0 4 608 29 0 0 0 chr3R 3134368 3134397 -24770656 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 23 0 0 0 chr3R 3134559 3134582 -24770471 + AT_rich Low_complexity Low_complexity 1 23 0 4 608 207 200 0 0 chr3R 3135576 3135621 -24769432 + CT-rich Low_complexity Low_complexity 2 46 0 4 608 25 65 0 0 chr3R 3136650 3136696 -24768357 + AT_rich Low_complexity Low_complexity 1 46 0 4 608 24 53 0 0 chr3R 3137359 3137397 -24767656 + AT_rich Low_complexity Low_complexity 1 38 0 4 608 235 151 245 0 chr3R 3137694 3137747 -24767306 - DNAREP1_DM LINE Penelope 0 594 529 4 608 493 246 174 51 chr3R 3137770 3138121 -24766932 - DNAREP1_DM LINE Penelope -188 406 13 4 608 22 70 0 0 chr3R 3138161 3138204 -24766849 + AT_rich Low_complexity Low_complexity 1 43 0 4 608 28 0 0 0 chr3R 3139554 3139582 -24765471 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 21 0 0 0 chr3R 3139976 3139997 -24765056 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 31 26 0 0 chr3R 3140934 3140972 -24764081 + AT_rich Low_complexity Low_complexity 1 38 0 4 608 735 138 8 16 chr3R 3143227 3143352 -24761701 + DNAREP1_DM LINE Penelope 1 124 -470 4 608 21 0 0 0 chr3R 3143820 3143841 -24761212 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 23 0 0 0 chr3R 3144015 3144038 -24761015 + AT_rich Low_complexity Low_complexity 1 23 0 4 609 25 0 0 0 chr3R 3145907 3145932 -24759121 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 39 50 0 0 chr3R 3146027 3146087 -24758966 + AT_rich Low_complexity Low_complexity 1 60 0 4 609 198 191 0 0 chr3R 3148499 3148546 -24756507 + A-rich Low_complexity Low_complexity 1 47 0 4 609 41 58 0 0 chr3R 3148731 3148800 -24756253 + AT_rich Low_complexity Low_complexity 1 69 0 4 609 22 0 0 0 chr3R 3150411 3150433 -24754620 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 21 0 0 0 chr3R 3150554 3150575 -24754478 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 596 169 8 61 chr3R 3153158 3153290 -24751763 + DNAREP1_DM LINE Penelope 363 487 -107 4 609 268 233 0 40 chr3R 3156170 3156246 -24748807 - ROO_I LTR Pao -7543 713 641 4 609 25 51 0 0 chr3R 3160467 3160506 -24744547 + AT_rich Low_complexity Low_complexity 1 39 0 4 609 183 220 0 0 chr3R 3162071 3162121 -24742932 + CT-rich Low_complexity Low_complexity 2 51 0 4 609 28 29 0 0 chr3R 3163937 3163972 -24741081 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 35 0 0 0 chr3R 3164011 3164046 -24741007 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 189 0 0 0 chr3R 3164229 3164250 -24740803 + (TTA)n Simple_repeat Simple_repeat 3 23 0 4 609 21 71 0 0 chr3R 3165562 3165604 -24739449 + AT_rich Low_complexity Low_complexity 1 42 0 4 609 30 59 0 0 chr3R 3167140 3167191 -24737862 + AT_rich Low_complexity Low_complexity 1 51 0 4 609 470 200 460 32 chr3R 3167266 3167601 -24737452 - DNAREP1_DM LINE Penelope -109 485 7 4 609 329 329 0 0 chr3R 3171631 3171777 -24733276 + (CTG)n Simple_repeat Simple_repeat 3 148 0 4 609 25 0 0 0 chr3R 3172160 3172185 -24732868 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 22 35 0 0 chr3R 3173519 3173548 -24731505 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 215 93 0 23 chr3R 3175437 3175481 -24729572 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 4 609 4130 13 0 61 chr3R 3175485 3175992 -24729061 - MICROPIA_LTR LTR Gypsy 0 476 1 4 609 40130 7 12 9 chr3R 3175996 3180449 -24724604 - MICROPIA_I LTR Gypsy -12 4464 1 4 609 4130 13 0 61 chr3R 3180449 3180956 -24724097 - MICROPIA_LTR LTR Gypsy 0 476 1 4 609 21 36 0 0 chr3R 3180956 3180984 -24724069 + AT_rich Low_complexity Low_complexity 1 28 0 4 609 1720 0 0 0 chr3R 3180984 3181170 -24723883 - POGON1 DNA Pogo 0 186 1 4 609 22 0 0 0 chr3R 3189564 3189586 -24715467 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 21 36 0 0 chr3R 3191462 3191490 -24713563 + AT_rich Low_complexity Low_complexity 1 28 0 4 609 27 0 0 0 chr3R 3195057 3195084 -24709969 + AT_rich Low_complexity Low_complexity 1 27 0 4 609 21 0 0 0 chr3R 3195290 3195311 -24709742 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 22 35 0 0 chr3R 3196042 3196071 -24708982 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 22 0 0 0 chr3R 3196286 3196308 -24708745 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 22 0 0 0 chr3R 3196824 3196846 -24708207 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 22 0 0 0 chr3R 3198479 3198501 -24706552 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 340 229 0 0 chr3R 3198501 3198571 -24706482 + DNAREP1_DM LINE Penelope 525 594 0 4 609 213 94 0 0 chr3R 3199417 3199449 -24705604 + (A)n Simple_repeat Simple_repeat 1 32 0 4 609 25 0 0 0 chr3R 3200481 3200506 -24704547 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 24 77 0 0 chr3R 3200590 3200642 -24704411 + AT_rich Low_complexity Low_complexity 1 52 0 4 609 183 129 0 0 chr3R 3203955 3203986 -24701067 + (ATG)n Simple_repeat Simple_repeat 1 31 0 4 609 22 0 0 0 chr3R 3206740 3206762 -24698291 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 327 113 0 0 chr3R 3207074 3207127 -24697926 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 609 21 57 0 0 chr3R 3207254 3207289 -24697764 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 256 211 0 17 chr3R 3208057 3208115 -24696938 + (ACTG)n Simple_repeat Simple_repeat 1 57 0 4 609 39 50 0 0 chr3R 3208427 3208487 -24696566 + AT_rich Low_complexity Low_complexity 1 60 0 4 609 230 125 21 0 chr3R 3213089 3213137 -24691916 + (CTTA)n Simple_repeat Simple_repeat 4 52 0 4 609 22 0 0 0 chr3R 3213139 3213161 -24691892 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 206 270 14 0 chr3R 3213619 3213693 -24691360 + (CCCA)n Simple_repeat Simple_repeat 2 76 0 4 609 242 267 17 0 chr3R 3214198 3214258 -24690795 + (TTCGGG)n Simple_repeat Simple_repeat 3 63 0 4 609 26 0 0 0 chr3R 3215134 3215160 -24689893 + AT_rich Low_complexity Low_complexity 1 26 0 4 609 24 0 0 0 chr3R 3218802 3218826 -24686227 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 24 0 0 0 chr3R 3221095 3221119 -24683934 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 225 119 0 0 chr3R 3222154 3222196 -24682857 + (A)n Simple_repeat Simple_repeat 1 42 0 4 609 21 0 0 0 chr3R 3223959 3223980 -24681073 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 27 29 0 0 chr3R 3225190 3225224 -24679829 + AT_rich Low_complexity Low_complexity 1 34 0 4 609 23 33 0 0 chr3R 3225631 3225661 -24679392 + AT_rich Low_complexity Low_complexity 1 30 0 4 609 24 77 0 0 chr3R 3229131 3229183 -24675870 + AT_rich Low_complexity Low_complexity 1 52 0 4 609 216 0 0 0 chr3R 3230245 3230269 -24674784 + (TAA)n Simple_repeat Simple_repeat 1 24 0 4 609 227 200 0 98 chr3R 3232014 3232075 -24672978 + DNAREP1_DM LINE Penelope 431 485 -109 4 609 24 0 0 0 chr3R 3232264 3232288 -24672765 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 22 35 0 0 chr3R 3240121 3240150 -24664903 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 231 36 0 0 chr3R 3241955 3241983 -24663070 + (CAG)n Simple_repeat Simple_repeat 1 28 0 4 609 21 57 0 0 chr3R 3242254 3242289 -24662764 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 33 56 0 0 chr3R 3243190 3243244 -24661809 + AT_rich Low_complexity Low_complexity 1 54 0 4 609 23 33 0 0 chr3R 3244275 3244305 -24660748 + AT_rich Low_complexity Low_complexity 1 30 0 4 609 25 0 0 0 chr3R 3246147 3246172 -24658881 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 189 147 0 0 chr3R 3250012 3250046 -24655007 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 4 609 272 189 0 39 chr3R 3250098 3250175 -24654878 - ROO_I LTR Pao -7531 725 652 4 609 200 273 0 0 chr3R 3250524 3250579 -24654474 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 609 21 0 0 0 chr3R 3253457 3253478 -24651575 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 226 219 0 0 chr3R 3253653 3253694 -24651359 + (CCA)n Simple_repeat Simple_repeat 2 42 0 4 609 30 45 0 0 chr3R 3255212 3255256 -24649797 + AT_rich Low_complexity Low_complexity 1 44 0 4 609 22 88 0 0 chr3R 3255331 3255388 -24649665 + AT_rich Low_complexity Low_complexity 1 57 0 4 609 313 95 0 31 chr3R 3257127 3257192 -24647861 + (TGG)n Simple_repeat Simple_repeat 2 64 0 4 609 205 175 0 0 chr3R 3258213 3258253 -24646800 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 609 24 0 0 0 chr3R 3260604 3260628 -24644425 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 317 148 0 62 chr3R 3262035 3262100 -24642953 + DNAREP1_DM LINE Penelope 1 61 -533 4 609 245 118 0 0 chr3R 3262259 3262293 -24642760 + DNAREP1_DM LINE Penelope 448 481 -113 4 609 333 0 0 0 chr3R 3262293 3262330 -24642723 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 609 38 22 0 0 chr3R 3262539 3262584 -24642469 + AT_rich Low_complexity Low_complexity 1 45 0 4 609 29 0 0 0 chr3R 3263086 3263115 -24641938 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 36 0 0 0 chr3R 3264215 3264251 -24640802 + AT_rich Low_complexity Low_complexity 1 36 0 4 609 189 121 0 0 chr3R 3264596 3264629 -24640424 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 4 609 21 0 0 0 chr3R 3265335 3265356 -24639697 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 25 51 0 0 chr3R 3266419 3266458 -24638595 + AT_rich Low_complexity Low_complexity 1 39 0 4 609 261 146 0 0 chr3R 3266693 3266741 -24638312 + (CGA)n Simple_repeat Simple_repeat 3 50 0 4 609 23 33 0 0 chr3R 3271664 3271694 -24633359 + AT_rich Low_complexity Low_complexity 1 30 0 4 609 22 0 0 0 chr3R 3272172 3272194 -24632859 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 257 0 0 29 chr3R 3273755 3273789 -24631264 + (TAAAA)n Simple_repeat Simple_repeat 4 36 0 4 609 214 91 28 83 chr3R 3276110 3276182 -24628871 + (TTATA)n Simple_repeat Simple_repeat 5 72 0 4 610 507 195 159 79 chr3R 3277377 3277566 -24627487 + DNAREP1_DM LINE Penelope 1 204 -390 4 610 379 228 0 80 chr3R 3277562 3277662 -24627391 + DNAREP1_DM LINE Penelope 395 486 -108 4 610 21 57 0 0 chr3R 3277868 3277903 -24627150 + AT_rich Low_complexity Low_complexity 1 35 0 4 610 21 82 0 0 chr3R 3280320 3280369 -24624684 + AT_rich Low_complexity Low_complexity 1 49 0 4 610 252 0 0 0 chr3R 3282806 3282834 -24622219 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 4 610 228 227 0 0 chr3R 3284335 3284423 -24620630 + (TG)n Simple_repeat Simple_repeat 1 88 0 4 610 210 37 0 0 chr3R 3286833 3286860 -24618193 + (GA)n Simple_repeat Simple_repeat 1 27 0 4 610 25 0 0 0 chr3R 3288530 3288555 -24616498 + AT_rich Low_complexity Low_complexity 1 25 0 4 610 283 197 0 16 chr3R 3293583 3293645 -24611408 + DNAREP1_DM LINE Penelope 28 88 -506 4 610 275 191 0 31 chr3R 3294892 3294957 -24610096 + (CCCGAA)n Simple_repeat Simple_repeat 6 68 0 4 610 30 0 0 0 chr3R 3296770 3296800 -24608253 + AT_rich Low_complexity Low_complexity 1 30 0 4 610 5086 61 6 0 chr3R 3296800 3297487 -24607566 - BS2 LINE Jockey 0 4721 4031 4 610 28 29 0 0 chr3R 3297741 3297776 -24607277 + AT_rich Low_complexity Low_complexity 1 35 0 4 610 30 0 0 0 chr3R 3298182 3298212 -24606841 + AT_rich Low_complexity Low_complexity 1 30 0 4 610 27 29 0 0 chr3R 3300220 3300254 -24604799 + AT_rich Low_complexity Low_complexity 1 34 0 4 610 41 48 0 0 chr3R 3301160 3301222 -24603831 + AT_rich Low_complexity Low_complexity 1 62 0 4 610 1240 60 118 151 chr3R 3301281 3301559 -24603494 + HELENA_RT LINE Jockey 1086 1317 0 4 610 21 0 0 0 chr3R 3306004 3306025 -24599028 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 22 0 0 0 chr3R 3307348 3307370 -24597683 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 26 88 0 0 chr3R 3307417 3307485 -24597568 + AT_rich Low_complexity Low_complexity 1 68 0 4 610 25 65 0 0 chr3R 3307962 3308008 -24597045 + AT_rich Low_complexity Low_complexity 1 46 0 4 610 21 0 0 0 chr3R 3308808 3308829 -24596224 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 189 0 0 0 chr3R 3311783 3311804 -24593249 + (A)n Simple_repeat Simple_repeat 1 21 0 4 610 23 0 0 0 chr3R 3312244 3312267 -24592786 + AT_rich Low_complexity Low_complexity 1 23 0 4 610 33 25 0 0 chr3R 3314378 3314418 -24590635 + AT_rich Low_complexity Low_complexity 1 40 0 4 610 24 85 0 0 chr3R 3316747 3316806 -24588247 + AT_rich Low_complexity Low_complexity 1 59 0 4 610 21 57 0 0 chr3R 3319613 3319648 -24585405 + AT_rich Low_complexity Low_complexity 1 35 0 4 610 205 179 0 0 chr3R 3323375 3323414 -24581639 + T-rich Low_complexity Low_complexity 3 41 0 4 610 275 200 0 0 chr3R 3326530 3326590 -24578463 - DNAREP1_DM LINE Penelope -22 572 513 4 610 26 0 0 0 chr3R 3330363 3330389 -24574664 + AT_rich Low_complexity Low_complexity 1 26 0 4 610 22 0 0 0 chr3R 3330413 3330435 -24574618 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 23 0 0 0 chr3R 3332888 3332911 -24572142 + AT_rich Low_complexity Low_complexity 1 23 0 4 610 289 157 39 0 chr3R 3343051 3343102 -24561951 - DNAREP1_DM LINE Penelope -136 458 406 4 610 357 165 350 42 chr3R 3343151 3343310 -24561743 + DNAREP1_DM LINE Penelope 387 594 0 4 610 257 116 0 44 chr3R 3343682 3343727 -24561326 + PROTOP_A DNA P 511 553 -552 4 610 291 233 41 0 chr3R 3344216 3344289 -24560764 - DNAREP1_DM LINE Penelope -175 419 344 4 610 229 183 158 88 chr3R 3353448 3353562 -24551491 - GTWIN_I LTR Gypsy -1014 5407 5286 4 610 24 0 0 0 chr3R 3355767 3355791 -24549262 + AT_rich Low_complexity Low_complexity 1 24 0 4 610 252 240 152 48 chr3R 3359516 3359621 -24545432 + DNAREP1_DM LINE Penelope 426 541 -53 4 610 25 51 0 0 chr3R 3359670 3359709 -24545344 + AT_rich Low_complexity Low_complexity 1 39 0 4 610 22 35 0 0 chr3R 3361319 3361348 -24543705 + AT_rich Low_complexity Low_complexity 1 29 0 4 610 22 0 0 0 chr3R 3367261 3367283 -24537770 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 36 53 0 0 chr3R 3368033 3368090 -24536963 + AT_rich Low_complexity Low_complexity 1 57 0 4 610 24 32 0 0 chr3R 3368182 3368213 -24536840 + AT_rich Low_complexity Low_complexity 1 31 0 4 610 274 23 47 0 chr3R 3368217 3368260 -24536793 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 610 30 0 0 0 chr3R 3369563 3369593 -24535460 + AT_rich Low_complexity Low_complexity 1 30 0 4 610 21 0 0 0 chr3R 3371456 3371477 -24533576 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 26 64 0 0 chr3R 3371583 3371630 -24533423 + AT_rich Low_complexity Low_complexity 1 47 0 4 610 348 43 0 0 chr3R 3378351 3378397 -24526656 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 610 32 26 0 0 chr3R 3378900 3378939 -24526114 + AT_rich Low_complexity Low_complexity 1 39 0 4 610 26 30 0 0 chr3R 3379889 3379922 -24525131 + AT_rich Low_complexity Low_complexity 1 33 0 4 610 195 42 0 0 chr3R 3381032 3381056 -24523997 + (TACTG)n Simple_repeat Simple_repeat 5 28 0 4 610 262 122 0 0 chr3R 3384182 3384223 -24520830 - DNAREP1_DM LINE Penelope -540 54 14 4 610 43462 0 0 0 chr3R 3384297 3388996 -24516057 + DOC LINE Jockey 16 4713 -12 4 610 270 0 0 0 chr3R 3391112 3391142 -24513911 + (CAGC)n Simple_repeat Simple_repeat 4 33 0 4 610 30 27 0 0 chr3R 3392768 3392805 -24512248 + AT_rich Low_complexity Low_complexity 1 37 0 4 610 21 36 0 0 chr3R 3393882 3393910 -24511143 + AT_rich Low_complexity Low_complexity 1 28 0 4 610 180 0 0 0 chr3R 3394986 3395006 -24510047 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 610 27 62 0 0 chr3R 3395976 3396024 -24509029 + AT_rich Low_complexity Low_complexity 1 48 0 4 610 28 0 0 0 chr3R 3396265 3396293 -24508760 + AT_rich Low_complexity Low_complexity 1 28 0 4 610 438 120 0 0 chr3R 3397993 3398068 -24506985 + (CTG)n Simple_repeat Simple_repeat 3 77 0 4 610 279 79 0 0 chr3R 3398194 3398232 -24506821 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 610 21 0 0 0 chr3R 3404316 3404337 -24500716 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 29 70 0 0 chr3R 3405174 3405231 -24499822 + AT_rich Low_complexity Low_complexity 1 57 0 4 610 234 174 0 0 chr3R 3405841 3405887 -24499166 + (CAG)n Simple_repeat Simple_repeat 3 48 0 4 611 21 0 0 0 chr3R 3408721 3408742 -24496311 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 30 0 0 0 chr3R 3410236 3410266 -24494787 + AT_rich Low_complexity Low_complexity 1 30 0 4 611 21 36 0 0 chr3R 3417760 3417788 -24487265 + AT_rich Low_complexity Low_complexity 1 28 0 4 611 21 0 0 0 chr3R 3434533 3434554 -24470499 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 23 68 0 0 chr3R 3436793 3436837 -24468216 + AT_rich Low_complexity Low_complexity 1 44 0 4 611 22 56 0 0 chr3R 3437477 3437513 -24467540 + AT_rich Low_complexity Low_complexity 1 36 0 4 611 30 0 0 0 chr3R 3441314 3441344 -24463709 + AT_rich Low_complexity Low_complexity 1 30 0 4 611 211 229 0 0 chr3R 3443246 3443294 -24461759 + T-rich Low_complexity Low_complexity 1 48 0 4 611 22 0 0 0 chr3R 3447933 3447955 -24457098 + AT_rich Low_complexity Low_complexity 1 22 0 4 611 252 0 0 0 chr3R 3448346 3448374 -24456679 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 611 27 73 0 0 chr3R 3448863 3448918 -24456135 + AT_rich Low_complexity Low_complexity 1 55 0 4 611 24 67 0 0 chr3R 3452503 3452548 -24452505 + AT_rich Low_complexity Low_complexity 1 45 0 4 611 23 0 0 0 chr3R 3453536 3453559 -24451494 + AT_rich Low_complexity Low_complexity 1 23 0 4 611 189 74 0 0 chr3R 3461114 3461141 -24443912 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 611 21 0 0 0 chr3R 3463131 3463152 -24441901 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 32 86 0 0 chr3R 3463373 3463454 -24441599 + AT_rich Low_complexity Low_complexity 1 81 0 4 611 1802 123 19 45 chr3R 3465885 3466259 -24438794 + FB4_DM DNA Tc1 2398 2761 -1328 4 611 1855 161 160 45 chr3R 3466839 3467371 -24437682 - HOBO DNA hAT 0 3016 2424 4 611 46 19 0 0 chr3R 3467387 3467440 -24437613 + AT_rich Low_complexity Low_complexity 1 53 0 4 611 268 86 86 0 chr3R 3467456 3467514 -24437539 - HOBO DNA hAT -611 2405 2343 4 611 3346 122 130 3 chr3R 3467524 3468131 -24436922 - HOBO DNA hAT -2069 947 264 4 611 415 280 65 23 chr3R 3468842 3469058 -24435995 + MICROPIA_I LTR Gypsy 1849 2073 -2403 4 611 448 312 1 2 chr3R 3469125 3469305 -24435748 + MICROPIA_I LTR Gypsy 2239 2430 -1669 4 611 38 39 0 0 chr3R 3470570 3470622 -24434431 + AT_rich Low_complexity Low_complexity 1 52 0 4 611 32 26 0 0 chr3R 3471576 3471615 -24433438 + AT_rich Low_complexity Low_complexity 1 39 0 4 611 28 29 0 0 chr3R 3476287 3476322 -24428731 + AT_rich Low_complexity Low_complexity 1 35 0 4 611 22 35 0 0 chr3R 3476950 3476979 -24428074 + AT_rich Low_complexity Low_complexity 1 29 0 4 611 203 208 0 20 chr3R 3477656 3477705 -24427348 + (CAA)n Simple_repeat Simple_repeat 1 48 0 4 611 22 35 0 0 chr3R 3478001 3478030 -24427023 + AT_rich Low_complexity Low_complexity 1 29 0 4 611 22 35 0 0 chr3R 3478171 3478200 -24426853 + AT_rich Low_complexity Low_complexity 1 29 0 4 611 761 40 10 0 chr3R 3478220 3478321 -24426732 + (TA)n Simple_repeat Simple_repeat 2 103 0 4 611 240 93 70 0 chr3R 3481791 3481834 -24423219 + DNAREP1_DM LINE Penelope 263 308 -286 4 611 369 174 11 65 chr3R 3481821 3481913 -24423140 + DNAREP1_DM LINE Penelope 506 592 -2 4 611 250 264 0 0 chr3R 3482276 3482348 -24422705 + DNAREP1_DM LINE Penelope 1 72 -522 4 611 23 78 0 0 chr3R 3482501 3482552 -24422501 + AT_rich Low_complexity Low_complexity 1 51 0 4 611 30 0 0 0 chr3R 3483003 3483033 -24422020 + AT_rich Low_complexity Low_complexity 1 30 0 4 611 210 171 0 0 chr3R 3490670 3490711 -24414342 + (CAG)n Simple_repeat Simple_repeat 3 43 0 4 611 202 139 23 0 chr3R 3495284 3495327 -24409726 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 611 265 272 17 17 chr3R 3502492 3502608 -24402445 + (CAA)n Simple_repeat Simple_repeat 3 118 0 4 611 38 51 0 0 chr3R 3503422 3503481 -24401572 + AT_rich Low_complexity Low_complexity 1 59 0 4 611 21 57 0 0 chr3R 3503713 3503748 -24401305 + AT_rich Low_complexity Low_complexity 1 35 0 4 611 27 49 0 0 chr3R 3505903 3505944 -24399109 + AT_rich Low_complexity Low_complexity 1 41 0 4 611 212 147 0 0 chr3R 3507304 3507338 -24397715 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 611 2546 7 42 0 chr3R 3520353 3520639 -24384414 + Invader3_LTR LTR Gypsy 1 298 0 4 611 7295 5 0 0 chr3R 3520639 3521431 -24383622 + Invader3_I LTR Gypsy 1 792 -4096 4 611 1766 169 19 92 chr3R 3521431 3521854 -24383199 + Gypsy3_LTR LTR Gypsy 1 392 -6 4 611 240 111 0 62 chr3R 3521876 3521924 -24383129 + Gypsy3_LTR LTR Gypsy 354 398 0 4 611 23044 229 21 23 chr3R 3521940 3528654 -24376399 + Gypsy6_I LTR Gypsy 27 7012 0 4 611 1766 169 19 92 chr3R 3528656 3529079 -24375974 + Gypsy3_LTR LTR Gypsy 1 392 -6 4 611 240 111 0 62 chr3R 3529101 3529149 -24375904 + Gypsy3_LTR LTR Gypsy 354 398 0 4 611 37322 5 1 3 chr3R 3529149 3533255 -24371798 + Invader3_I LTR Gypsy 789 4888 0 4 611 2546 7 42 0 chr3R 3533255 3533541 -24371512 + Invader3_LTR LTR Gypsy 1 298 0 4 611 6465 6 0 0 chr3R 3533541 3534246 -24370807 + Invader3_I LTR Gypsy 1 705 -4183 4 76 43999 7 1 5 chr3R 3534219 3539071 -24365982 + Invader3_I LTR Gypsy 57 4888 0 4 612 2546 7 42 0 chr3R 3539071 3539357 -24365696 + Invader3_LTR LTR Gypsy 1 298 0 4 612 21 57 0 0 chr3R 3539930 3539965 -24365088 + AT_rich Low_complexity Low_complexity 1 35 0 4 612 31 0 0 0 chr3R 3542849 3542880 -24362173 + AT_rich Low_complexity Low_complexity 1 31 0 4 612 22 0 0 0 chr3R 3543466 3543488 -24361565 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 22 0 0 0 chr3R 3554631 3554653 -24350400 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 3868 2 0 0 chr3R 3555242 3555666 -24349387 + Stalker2_LTR LTR Gypsy 1 424 0 4 612 14023 5 3 1 chr3R 3555666 3557255 -24347798 + Stalker2_I LTR Gypsy 1 1592 -5810 4 612 38394 19 5 2 chr3R 3557454 3562699 -24342354 + Stalker2_I LTR Gypsy 1574 6530 0 4 612 3630 2 0 0 chr3R 3562699 3563123 -24341930 + Stalker2_LTR LTR Gypsy 1 424 0 4 612 23 0 0 0 chr3R 3565708 3565731 -24339322 + AT_rich Low_complexity Low_complexity 1 23 0 4 612 22 0 0 0 chr3R 3569646 3569668 -24335385 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 26 0 0 0 chr3R 3574990 3575016 -24330037 + AT_rich Low_complexity Low_complexity 1 26 0 4 612 27 87 0 0 chr3R 3576023 3576092 -24328961 + AT_rich Low_complexity Low_complexity 1 69 0 4 612 239 211 0 0 chr3R 3576099 3576151 -24328902 - DNAREP1_DM LINE Penelope -541 53 2 4 612 21 0 0 0 chr3R 3577009 3577030 -24328023 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 21 36 0 0 chr3R 3580024 3580052 -24325001 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 23 0 0 0 chr3R 3580849 3580872 -24324181 + AT_rich Low_complexity Low_complexity 1 23 0 4 612 29 60 0 0 chr3R 3581919 3581969 -24323084 + AT_rich Low_complexity Low_complexity 1 50 0 4 612 198 156 0 0 chr3R 3583141 3583186 -24321867 + (GGATG)n Simple_repeat Simple_repeat 1 45 0 4 612 350 141 0 30 chr3R 3584835 3584901 -24320152 - DNAREP1_DM LINE Penelope -529 65 2 4 612 53 0 0 0 chr3R 3585344 3585397 -24319656 + AT_rich Low_complexity Low_complexity 1 53 0 4 612 44 0 0 0 chr3R 3587557 3587601 -24317452 + AT_rich Low_complexity Low_complexity 1 44 0 4 612 24 67 0 0 chr3R 3589835 3589880 -24315173 + AT_rich Low_complexity Low_complexity 1 45 0 4 612 26 74 0 0 chr3R 3590093 3590147 -24314906 + AT_rich Low_complexity Low_complexity 1 54 0 4 612 1246 139 63 25 chr3R 3590204 3590546 -24314507 - DNAREP1_DM LINE Penelope 0 594 202 4 612 21 36 0 0 chr3R 3590679 3590707 -24314346 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 224 233 0 16 chr3R 3591170 3591231 -24313822 + (CAACC)n Simple_repeat Simple_repeat 4 63 0 4 612 22 0 0 0 chr3R 3593486 3593508 -24311545 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 237 83 0 0 chr3R 3593898 3593934 -24311119 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 612 32 26 0 0 chr3R 3594110 3594149 -24310904 + AT_rich Low_complexity Low_complexity 1 39 0 4 612 28 0 0 0 chr3R 3599018 3599046 -24306007 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 25 65 0 0 chr3R 3601505 3601551 -24303502 + AT_rich Low_complexity Low_complexity 1 46 0 4 612 273 151 0 0 chr3R 3602190 3602243 -24302810 + (TTCGGG)n Simple_repeat Simple_repeat 2 54 0 4 612 21 0 0 0 chr3R 3603831 3603852 -24301201 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 22 0 0 0 chr3R 3606454 3606476 -24298577 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 21 0 0 0 chr3R 3611307 3611328 -24293725 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 240 100 44 111 chr3R 3615032 3615122 -24289931 - PROTOP_B DNA P -561 592 509 4 612 23 33 0 0 chr3R 3619055 3619085 -24285968 + AT_rich Low_complexity Low_complexity 1 30 0 4 612 39 0 0 0 chr3R 3621150 3621189 -24283864 + AT_rich Low_complexity Low_complexity 1 39 0 4 612 234 105 0 0 chr3R 3628107 3628145 -24276908 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 612 21 0 0 0 chr3R 3628527 3628548 -24276505 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 21 0 0 0 chr3R 3631630 3631651 -24273402 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 26 64 0 0 chr3R 3631729 3631776 -24273277 + AT_rich Low_complexity Low_complexity 1 47 0 4 612 258 136 0 0 chr3R 3634922 3634966 -24270087 + (TCCG)n Simple_repeat Simple_repeat 4 47 0 4 612 26 0 0 0 chr3R 3635872 3635898 -24269155 + AT_rich Low_complexity Low_complexity 1 26 0 4 612 21 0 0 0 chr3R 3638390 3638411 -24266642 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 216 67 0 0 chr3R 3640498 3640528 -24264525 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 612 2525 44 0 0 chr3R 3644928 3645226 -24259827 - Invader3_LTR LTR Gypsy 0 298 1 4 612 24 0 0 0 chr3R 3647511 3647535 -24257518 + AT_rich Low_complexity Low_complexity 1 24 0 4 612 31 26 0 0 chr3R 3649066 3649104 -24255949 + AT_rich Low_complexity Low_complexity 1 38 0 4 612 201 39 0 0 chr3R 3649390 3649416 -24255637 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 612 21 57 0 0 chr3R 3649840 3649875 -24255178 + AT_rich Low_complexity Low_complexity 1 35 0 4 612 28 0 0 0 chr3R 3651455 3651483 -24253570 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 342 123 0 0 chr3R 3658499 3658556 -24246497 + (GCTG)n Simple_repeat Simple_repeat 3 59 0 4 612 212 0 36 0 chr3R 3659989 3660017 -24245036 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 4 612 24 32 0 0 chr3R 3660694 3660725 -24244328 + AT_rich Low_complexity Low_complexity 1 31 0 4 612 240 35 0 0 chr3R 3662989 3663018 -24242035 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 612 554 164 136 48 chr3R 3664137 3664284 -24240769 - DNAREP1_DM LINE Penelope 0 594 435 4 612 33 43 0 0 chr3R 3669254 3669301 -24235752 + AT_rich Low_complexity Low_complexity 1 47 0 4 612 24 32 0 0 chr3R 3669337 3669368 -24235685 + AT_rich Low_complexity Low_complexity 1 31 0 4 613 23 54 0 0 chr3R 3670405 3670442 -24234611 + AT_rich Low_complexity Low_complexity 1 37 0 4 613 219 275 0 0 chr3R 3671797 3671866 -24233187 + GA-rich Low_complexity Low_complexity 1 69 0 4 613 202 159 22 22 chr3R 3673053 3673098 -24231955 + (CAAAC)n Simple_repeat Simple_repeat 2 46 0 4 613 25 0 0 0 chr3R 3675354 3675379 -24229674 + AT_rich Low_complexity Low_complexity 1 25 0 4 613 9579 21 1 3 chr3R 3675421 3676528 -24228525 - PROTOP_A DNA P 0 1105 1 4 613 26 0 0 0 chr3R 3680348 3680374 -24224679 + AT_rich Low_complexity Low_complexity 1 26 0 4 613 22 0 0 0 chr3R 3681610 3681632 -24223421 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 21 0 0 0 chr3R 3682364 3682385 -24222668 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 210 37 0 0 chr3R 3684480 3684507 -24220546 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 4 613 31 26 0 0 chr3R 3685503 3685541 -24219512 + AT_rich Low_complexity Low_complexity 1 38 0 4 613 255 31 0 0 chr3R 3686656 3686688 -24218365 + (T)n Simple_repeat Simple_repeat 1 32 0 4 613 241 184 0 64 chr3R 3686952 3687062 -24217991 - ROO_I LTR Pao -7513 743 641 4 613 192 152 0 0 chr3R 3687200 3687233 -24217820 + (TTG)n Simple_repeat Simple_repeat 1 33 0 4 613 27 62 0 0 chr3R 3692091 3692139 -24212914 + AT_rich Low_complexity Low_complexity 1 48 0 4 613 206 121 0 0 chr3R 3693372 3693405 -24211648 + (T)n Simple_repeat Simple_repeat 1 33 0 4 613 234 244 0 58 chr3R 3694098 3694185 -24210868 + GA-rich Low_complexity Low_complexity 4 85 0 4 613 21 57 0 0 chr3R 3694602 3694637 -24210416 + AT_rich Low_complexity Low_complexity 1 35 0 4 613 24 0 0 0 chr3R 3698102 3698126 -24206927 + AT_rich Low_complexity Low_complexity 1 24 0 4 613 21 0 0 0 chr3R 3699314 3699335 -24205718 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 21 0 0 0 chr3R 3701048 3701069 -24203984 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 356 195 0 61 chr3R 3702434 3702516 -24202537 + DNAREP1_DM LINE Penelope 420 496 -98 4 613 22 0 0 0 chr3R 3709016 3709038 -24196015 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 210 71 0 0 chr3R 3712343 3712371 -24192682 + (CTG)n Simple_repeat Simple_repeat 3 30 0 4 613 23 33 0 0 chr3R 3718521 3718551 -24186502 + AT_rich Low_complexity Low_complexity 1 30 0 4 613 23 33 0 0 chr3R 3719239 3719269 -24185784 + AT_rich Low_complexity Low_complexity 1 30 0 4 613 23 54 0 0 chr3R 3719293 3719330 -24185723 + AT_rich Low_complexity Low_complexity 1 37 0 4 613 324 171 0 0 chr3R 3721848 3721930 -24183123 + (CATCC)n Simple_repeat Simple_repeat 4 85 0 4 613 31 26 0 0 chr3R 3728462 3728500 -24176553 + AT_rich Low_complexity Low_complexity 1 38 0 4 613 35 63 0 0 chr3R 3728648 3728711 -24176342 + AT_rich Low_complexity Low_complexity 1 63 0 4 613 23 54 0 0 chr3R 3729110 3729147 -24175906 + AT_rich Low_complexity Low_complexity 1 37 0 4 613 216 207 17 33 chr3R 3737281 3737341 -24167712 + (CTG)n Simple_repeat Simple_repeat 1 59 0 4 613 21 0 0 0 chr3R 3737717 3737738 -24167315 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 21 0 0 0 chr3R 3737826 3737847 -24167206 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 255 125 0 0 chr3R 3739407 3739447 -24165606 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 613 22 80 0 0 chr3R 3740451 3740501 -24164552 + AT_rich Low_complexity Low_complexity 1 50 0 4 613 294 233 150 126 chr3R 3741065 3741232 -24163821 - DNAREP1_DM LINE Penelope -40 554 384 4 613 323 212 128 34 chr3R 3741426 3741543 -24163510 - DNAREP1_DM LINE Penelope -109 485 358 4 613 325 211 0 27 chr3R 3741549 3741622 -24163431 - DNAREP1_DM LINE Penelope -523 71 1 4 613 204 267 0 0 chr3R 3752178 3752223 -24152830 + (CTCGG)n Simple_repeat Simple_repeat 4 48 0 4 613 282 73 0 0 chr3R 3752238 3752279 -24152774 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 4 613 201 74 0 0 chr3R 3758643 3758670 -24146383 + (AGCTG)n Simple_repeat Simple_repeat 1 27 0 4 613 201 74 0 0 chr3R 3758670 3758696 -24146357 + (GGCTG)n Simple_repeat Simple_repeat 3 29 0 4 613 21 0 0 0 chr3R 3759689 3759710 -24145343 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 27 29 0 0 chr3R 3762247 3762281 -24142772 + AT_rich Low_complexity Low_complexity 1 34 0 4 613 213 145 48 0 chr3R 3762628 3762690 -24142363 + (CAA)n Simple_repeat Simple_repeat 1 65 0 4 613 256 256 23 11 chr3R 3762782 3762869 -24142184 + (CTG)n Simple_repeat Simple_repeat 3 90 0 4 613 294 180 0 0 chr3R 3764409 3764470 -24140583 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 613 22 0 0 0 chr3R 3768820 3768842 -24136211 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 243 61 0 0 chr3R 3770542 3770575 -24134478 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 613 21 89 0 0 chr3R 3774663 3774719 -24130334 + AT_rich Low_complexity Low_complexity 1 56 0 4 613 21 0 0 0 chr3R 3775179 3775200 -24129853 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 324 70 0 0 chr3R 3775282 3775325 -24129728 + (ATG)n Simple_repeat Simple_repeat 2 44 0 4 613 29 70 0 0 chr3R 3775525 3775582 -24129471 + AT_rich Low_complexity Low_complexity 1 57 0 4 613 244 400 0 0 chr3R 3775925 3776000 -24129053 + C-rich Low_complexity Low_complexity 1 75 0 4 613 32 75 0 0 chr3R 3778965 3779032 -24126021 + AT_rich Low_complexity Low_complexity 1 67 0 4 613 27 0 0 0 chr3R 3780514 3780541 -24124512 + AT_rich Low_complexity Low_complexity 1 27 0 4 613 24 0 0 0 chr3R 3784276 3784300 -24120753 + AT_rich Low_complexity Low_complexity 1 24 0 4 613 500 161 115 0 chr3R 3785121 3785208 -24119845 - DNAREP1_DM LINE Penelope -107 487 391 4 613 195 69 0 0 chr3R 3785865 3785894 -24119159 + (TGG)n Simple_repeat Simple_repeat 1 29 0 4 613 24 32 0 0 chr3R 3787611 3787642 -24117411 + AT_rich Low_complexity Low_complexity 1 31 0 4 613 28 0 0 0 chr3R 3788810 3788838 -24116215 + AT_rich Low_complexity Low_complexity 1 28 0 4 613 216 170 21 21 chr3R 3789866 3789914 -24115139 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 613 25 0 0 0 chr3R 3794303 3794328 -24110725 + AT_rich Low_complexity Low_complexity 1 25 0 4 613 24 32 0 0 chr3R 3797340 3797371 -24107682 + AT_rich Low_complexity Low_complexity 1 31 0 4 613 22 56 0 0 chr3R 3797766 3797802 -24107251 + AT_rich Low_complexity Low_complexity 1 36 0 4 613 255 114 0 0 chr3R 3798248 3798292 -24106761 + (ATG)n Simple_repeat Simple_repeat 3 46 0 4 613 21 82 0 0 chr3R 3799016 3799065 -24105988 + AT_rich Low_complexity Low_complexity 1 49 0 4 613 6275 24 8 3 chr3R 3799092 3800094 -24104959 - PROTOP_A DNA P 0 1105 1 4 613 22 35 0 0 chr3R 3800722 3800751 -24104302 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 26 50 0 0 chr3R 3802148 3802188 -24102865 + AT_rich Low_complexity Low_complexity 1 40 0 4 614 295 293 12 0 chr3R 3802293 3802375 -24102678 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 4 614 304 259 98 49 chr3R 3806854 3806976 -24098077 - DNAREP1_DM LINE Penelope -155 439 312 4 614 22 35 0 0 chr3R 3807174 3807203 -24097850 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 21 0 0 0 chr3R 3807552 3807573 -24097480 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 195 42 0 0 chr3R 3808063 3808087 -24096966 + (GCTG)n Simple_repeat Simple_repeat 3 26 0 4 614 211 220 0 20 chr3R 3810398 3810449 -24094604 + (TTCTG)n Simple_repeat Simple_repeat 3 52 0 4 614 294 29 0 0 chr3R 3814844 3814879 -24090174 + (CAG)n Simple_repeat Simple_repeat 1 35 0 4 614 21 0 0 0 chr3R 3815597 3815618 -24089435 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 200 86 29 0 chr3R 3817643 3817678 -24087375 + (CTG)n Simple_repeat Simple_repeat 3 38 0 4 614 25 65 0 0 chr3R 3818715 3818761 -24086292 + AT_rich Low_complexity Low_complexity 1 46 0 4 614 21 36 0 0 chr3R 3818854 3818882 -24086171 + AT_rich Low_complexity Low_complexity 1 28 0 4 614 297 0 0 0 chr3R 3819470 3819503 -24085550 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 614 231 36 0 0 chr3R 3820008 3820036 -24085017 + (T)n Simple_repeat Simple_repeat 1 28 0 4 614 30 0 0 0 chr3R 3820870 3820900 -24084153 + AT_rich Low_complexity Low_complexity 1 30 0 4 614 24 32 0 0 chr3R 3821214 3821245 -24083808 + AT_rich Low_complexity Low_complexity 1 31 0 4 614 185 149 0 41 chr3R 3821439 3821488 -24083565 + (CTG)n Simple_repeat Simple_repeat 2 48 0 4 614 243 0 0 0 chr3R 3822078 3822105 -24082948 + (CAAAT)n Simple_repeat Simple_repeat 1 27 0 4 614 23 0 0 0 chr3R 3825378 3825401 -24079652 + AT_rich Low_complexity Low_complexity 1 23 0 4 614 21 0 0 0 chr3R 3827189 3827210 -24077843 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 29 0 0 0 chr3R 3831878 3831907 -24073146 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 25 0 0 0 chr3R 3832697 3832722 -24072331 + AT_rich Low_complexity Low_complexity 1 25 0 4 614 229 218 18 0 chr3R 3835962 3836017 -24069036 + (CAG)n Simple_repeat Simple_repeat 3 58 0 4 614 203 158 0 0 chr3R 3838087 3838125 -24066928 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 614 24 32 0 0 chr3R 3840698 3840729 -24064324 + AT_rich Low_complexity Low_complexity 1 31 0 4 614 28 0 0 0 chr3R 3843188 3843216 -24061837 + AT_rich Low_complexity Low_complexity 1 28 0 4 614 228 179 0 0 chr3R 3843598 3843637 -24061416 + DNAREP1_DM LINE Penelope 13 51 -543 4 614 386 232 141 0 chr3R 3843644 3843743 -24061310 + DNAREP1_DM LINE Penelope 439 551 -43 4 614 54 29 0 0 chr3R 3853069 3853137 -24051916 + AT_rich Low_complexity Low_complexity 1 68 0 4 614 204 217 0 0 chr3R 3855298 3855344 -24049709 + (TCTCTG)n Simple_repeat Simple_repeat 1 46 0 4 614 21 57 0 0 chr3R 3857438 3857473 -24047580 + AT_rich Low_complexity Low_complexity 1 35 0 4 614 25 0 0 0 chr3R 3864906 3864931 -24040122 + AT_rich Low_complexity Low_complexity 1 25 0 4 614 25 0 0 0 chr3R 3866456 3866481 -24038572 + AT_rich Low_complexity Low_complexity 1 25 0 4 614 26 0 0 0 chr3R 3868409 3868435 -24036618 + AT_rich Low_complexity Low_complexity 1 26 0 4 614 2131 34 45 11 chr3R 3868435 3868704 -24036349 - DMCR1A LINE CR1 0 4470 4193 4 614 6564 32 70 5 chr3R 3868700 3869511 -24035542 - DMCR1A LINE CR1 -607 3863 3000 4 614 207 0 0 0 chr3R 3869565 3869588 -24035465 + (T)n Simple_repeat Simple_repeat 1 23 0 4 614 47277 5 1 1 chr3R 3869588 3874710 -24030343 - BS LINE Jockey 0 5126 8 4 614 203 224 0 33 chr3R 3879194 3879254 -24025799 + T-rich Low_complexity Low_complexity 1 58 0 4 614 213 231 0 0 chr3R 3887278 3887330 -24017723 + T-rich Low_complexity Low_complexity 1 52 0 4 614 276 30 0 0 chr3R 3890983 3891016 -24014037 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 614 246 229 0 0 chr3R 3895101 3895149 -24009904 + (CAT)n Simple_repeat Simple_repeat 1 48 0 4 614 342 80 0 0 chr3R 3896661 3896711 -24008342 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 614 24 32 0 0 chr3R 3900178 3900209 -24004844 + AT_rich Low_complexity Low_complexity 1 31 0 4 614 407 19 0 19 chr3R 3901856 3901909 -24003144 + (CAG)n Simple_repeat Simple_repeat 3 54 0 4 614 186 133 0 0 chr3R 3903183 3903213 -24001840 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 614 21 0 0 0 chr3R 3903823 3903844 -24001209 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 26 0 0 0 chr3R 3904638 3904664 -24000389 + AT_rich Low_complexity Low_complexity 1 26 0 4 614 237 213 33 0 chr3R 3907332 3907393 -23997660 + XDMR_DM Unknown Unknown 147 209 -151 4 614 255 253 129 24 chr3R 3907394 3907564 -23997489 - SAR_DM Satellite Satellite -1059 413 226 4 614 228 230 26 26 chr3R 3907499 3907575 -23997478 + XDMR Unknown Unknown 66 141 -220 4 614 274 247 84 44 chr3R 3907594 3907729 -23997324 + XDMR Unknown Unknown 1 176 -185 4 614 220 106 57 34 chr3R 3907756 3907844 -23997209 + (TA)n Simple_repeat Simple_repeat 1 90 0 4 614 22 35 0 0 chr3R 3908890 3908919 -23996134 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 214 158 0 0 chr3R 3909912 3909950 -23995103 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4 614 200 200 0 0 chr3R 3909996 3910046 -23995007 + (CCA)n Simple_repeat Simple_repeat 1 50 0 4 614 228 360 0 0 chr3R 3910494 3910594 -23994459 + (CCCGAA)n Simple_repeat Simple_repeat 2 101 0 4 614 3600 7 7 7 chr3R 3916314 3916728 -23988325 - DM297_LTR LTR Gypsy 0 414 1 4 614 8382 8 1 0 chr3R 3916728 3917703 -23987350 - DM297_I LTR Gypsy 0 6167 5192 4 614 14329 6 1 1 chr3R 3917682 3919320 -23985733 - DM297_I LTR Gypsy -4529 1638 1 4 614 3600 7 7 7 chr3R 3919320 3919734 -23985319 - DM297_LTR LTR Gypsy 0 414 1 4 614 180 111 0 0 chr3R 3919736 3919763 -23985290 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4 614 3075 3 0 0 chr3R 3920184 3920514 -23984539 + TRANSPAC_LTR LTR Gypsy 1 330 0 4 614 41466 2 0 0 chr3R 3920514 3925103 -23979950 + TRANSPAC_I LTR Gypsy 1 4590 0 4 614 3075 3 0 0 chr3R 3925102 3925432 -23979621 + TRANSPAC_LTR LTR Gypsy 1 330 0 4 614 27698 3 0 1 chr3R 3927536 3930567 -23974486 - G2_DM LINE Jockey -9 3093 66 4 614 185 0 40 0 chr3R 3930787 3930812 -23974241 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 4 614 211 194 0 43 chr3R 3931608 3931678 -23973375 + (CAA)n Simple_repeat Simple_repeat 1 67 0 4 615 22 0 0 0 chr3R 3932569 3932591 -23972462 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 211 292 0 0 chr3R 3935009 3935057 -23969996 + (TATG)n Simple_repeat Simple_repeat 3 50 0 4 615 219 36 0 0 chr3R 3936657 3936685 -23968368 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 615 196 140 19 39 chr3R 3939293 3939345 -23965708 + (TGGG)n Simple_repeat Simple_repeat 3 53 0 4 615 21 36 0 0 chr3R 3942589 3942617 -23962436 + AT_rich Low_complexity Low_complexity 1 28 0 4 615 195 42 0 0 chr3R 3944040 3944064 -23960989 + (CGGAA)n Simple_repeat Simple_repeat 5 28 0 4 615 31 88 0 0 chr3R 3945310 3945390 -23959663 + AT_rich Low_complexity Low_complexity 1 80 0 4 615 209 209 0 0 chr3R 3945584 3945627 -23959426 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 615 26 30 0 0 chr3R 3951988 3952021 -23953032 + AT_rich Low_complexity Low_complexity 1 33 0 4 615 32 57 0 0 chr3R 3954154 3954207 -23950846 + AT_rich Low_complexity Low_complexity 1 53 0 4 615 223 228 32 25 chr3R 3956194 3956287 -23948766 + A-rich Low_complexity Low_complexity 1 93 0 4 615 192 77 0 0 chr3R 3957911 3957937 -23947116 + (T)n Simple_repeat Simple_repeat 1 26 0 4 615 21 0 0 0 chr3R 3959947 3959968 -23945085 + AT_rich Low_complexity Low_complexity 1 21 0 4 615 39 0 0 0 chr3R 3960579 3960618 -23944435 + AT_rich Low_complexity Low_complexity 1 39 0 4 615 25 51 0 0 chr3R 3962314 3962353 -23942700 + AT_rich Low_complexity Low_complexity 1 39 0 4 615 25 0 0 0 chr3R 3963103 3963128 -23941925 + AT_rich Low_complexity Low_complexity 1 25 0 4 615 225 0 0 0 chr3R 3964124 3964149 -23940904 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 615 26 0 0 0 chr3R 3966039 3966065 -23938988 + AT_rich Low_complexity Low_complexity 1 26 0 4 615 213 186 17 17 chr3R 3966128 3966188 -23938865 + A-rich Low_complexity Low_complexity 5 64 0 4 615 22 0 0 0 chr3R 3966542 3966564 -23938489 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 244 198 34 23 chr3R 3973073 3973161 -23931892 + T-rich Low_complexity Low_complexity 2 90 0 4 615 23 0 0 0 chr3R 3973518 3973541 -23931512 + AT_rich Low_complexity Low_complexity 1 23 0 4 615 186 43 0 0 chr3R 3977582 3977605 -23927448 + (GA)n Simple_repeat Simple_repeat 1 23 0 4 615 201 159 0 0 chr3R 3978082 3978126 -23926927 + A-rich Low_complexity Low_complexity 1 44 0 4 615 192 97 0 0 chr3R 3980146 3980177 -23924876 + (CTCTG)n Simple_repeat Simple_repeat 1 31 0 4 615 300 137 0 0 chr3R 3980235 3980286 -23924767 + (AGCTG)n Simple_repeat Simple_repeat 1 51 0 4 615 21 36 0 0 chr3R 3982323 3982351 -23922702 + AT_rich Low_complexity Low_complexity 1 28 0 4 615 216 0 0 0 chr3R 3983794 3983818 -23921235 + (A)n Simple_repeat Simple_repeat 1 24 0 4 615 234 62 0 0 chr3R 3989038 3989070 -23915983 + (CAG)n Simple_repeat Simple_repeat 3 34 0 4 615 26 30 0 0 chr3R 3989289 3989322 -23915731 + AT_rich Low_complexity Low_complexity 1 33 0 4 615 274 234 16 0 chr3R 3989559 3989623 -23915430 + (CCCGAA)n Simple_repeat Simple_repeat 6 70 0 4 615 180 0 0 0 chr3R 3990871 3990891 -23914162 + (T)n Simple_repeat Simple_repeat 1 20 0 4 615 244 197 0 26 chr3R 3991641 3991719 -23913334 + ROO_I LTR Pao 657 732 -7524 4 615 201 277 0 0 chr3R 3991761 3991808 -23913245 + (TTG)n Simple_repeat Simple_repeat 3 49 0 4 615 219 139 0 0 chr3R 3992814 3992850 -23912203 + (CCG)n Simple_repeat Simple_repeat 2 37 0 4 615 362 154 11 11 chr3R 3992969 3993061 -23911992 - ROO_I LTR Pao -7530 726 635 4 615 242 204 0 0 chr3R 3994758 3994807 -23910246 + (CAG)n Simple_repeat Simple_repeat 3 51 0 4 615 237 108 0 0 chr3R 3996331 3996368 -23908685 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 615 369 161 0 0 chr3R 3997656 3997743 -23907310 + (ACTG)n Simple_repeat Simple_repeat 3 89 0 4 615 25 31 0 0 chr3R 3998362 3998394 -23906659 + AT_rich Low_complexity Low_complexity 1 32 0 4 615 24 0 0 0 chr3R 3999144 3999168 -23905885 + AT_rich Low_complexity Low_complexity 1 24 0 4 615 225 151 57 0 chr3R 3999823 3999876 -23905177 - ROO_I LTR Pao -7539 717 662 4 615 338 115 16 0 chr3R 4000876 4000937 -23904116 + (CAG)n Simple_repeat Simple_repeat 1 62 0 4 615 22 0 0 0 chr3R 4002362 4002384 -23902669 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 24 32 0 0 chr3R 4003803 4003834 -23901219 + AT_rich Low_complexity Low_complexity 1 31 0 4 615 195 42 0 0 chr3R 4005838 4005862 -23899191 + (TATAG)n Simple_repeat Simple_repeat 3 26 0 4 615 186 103 0 0 chr3R 4007269 4007298 -23897755 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 615 205 89 0 43 chr3R 4008849 4008896 -23896157 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 4 615 207 0 0 0 chr3R 4013609 4013632 -23891421 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 615 22 88 0 0 chr3R 4014488 4014545 -23890508 + AT_rich Low_complexity Low_complexity 1 57 0 4 615 237 33 0 0 chr3R 4015152 4015182 -23889871 + (CAGC)n Simple_repeat Simple_repeat 1 30 0 4 615 222 222 0 0 chr3R 4016483 4016528 -23888525 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 615 221 163 20 0 chr3R 4016876 4016925 -23888128 + (CTG)n Simple_repeat Simple_repeat 1 50 0 4 615 27 0 0 0 chr3R 4017705 4017732 -23887321 + AT_rich Low_complexity Low_complexity 1 27 0 4 615 21 57 0 0 chr3R 4017958 4017993 -23887060 + AT_rich Low_complexity Low_complexity 1 35 0 4 615 195 139 0 0 chr3R 4020844 4020880 -23884173 + (TTG)n Simple_repeat Simple_repeat 1 36 0 4 615 180 182 0 0 chr3R 4021864 4021908 -23883145 + CT-rich Low_complexity Low_complexity 2 45 0 4 615 255 152 0 0 chr3R 4025125 4025171 -23879882 + (ACCG)n Simple_repeat Simple_repeat 3 48 0 4 615 23 0 0 0 chr3R 4026298 4026321 -23878732 + AT_rich Low_complexity Low_complexity 1 23 0 4 615 24 32 0 0 chr3R 4027700 4027731 -23877322 + AT_rich Low_complexity Low_complexity 1 31 0 4 615 21 0 0 0 chr3R 4028292 4028313 -23876740 + AT_rich Low_complexity Low_complexity 1 21 0 4 615 203 184 0 0 chr3R 4028798 4028836 -23876217 + T-rich Low_complexity Low_complexity 1 38 0 4 615 7172 0 0 2 chr3R 4033333 4034119 -23870934 + FW_DM LINE Jockey 3905 4688 -4 4 615 228 235 0 0 chr3R 4034771 4034822 -23870231 + CT-rich Low_complexity Low_complexity 1 51 0 4 615 198 103 0 0 chr3R 4035676 4035705 -23869348 + (CAAAG)n Simple_repeat Simple_repeat 1 29 0 4 615 204 143 0 0 chr3R 4040074 4040116 -23864937 + (TTGG)n Simple_repeat Simple_repeat 3 44 0 4 615 205 152 0 0 chr3R 4040134 4040167 -23864886 + (TCG)n Simple_repeat Simple_repeat 3 35 0 4 615 21 71 0 0 chr3R 4042420 4042462 -23862591 + AT_rich Low_complexity Low_complexity 1 42 0 4 615 246 116 0 0 chr3R 4048795 4048838 -23856215 + (TTG)n Simple_repeat Simple_repeat 1 43 0 4 615 231 305 0 0 chr3R 4048981 4049063 -23855990 + GA-rich Low_complexity Low_complexity 2 83 0 4 615 26 0 0 0 chr3R 4050003 4050029 -23855024 + AT_rich Low_complexity Low_complexity 1 26 0 4 615 186 43 0 0 chr3R 4050246 4050269 -23854784 + (GATTG)n Simple_repeat Simple_repeat 5 27 0 4 615 423 221 0 0 chr3R 4050560 4050687 -23854366 + (CAGT)n Simple_repeat Simple_repeat 1 127 0 4 615 204 135 0 0 chr3R 4051592 4051629 -23853424 + (TGG)n Simple_repeat Simple_repeat 2 38 0 4 615 25 51 0 0 chr3R 4051854 4051893 -23853160 + AT_rich Low_complexity Low_complexity 1 39 0 4 615 22 0 0 0 chr3R 4057174 4057196 -23847857 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 499 128 224 30 chr3R 4058567 4058710 -23846343 + DNAREP1_DM LINE Penelope 245 415 -179 4 615 468 160 0 0 chr3R 4058726 4058801 -23846252 + DNAREP1_DM LINE Penelope 500 574 -20 4 616 25 0 0 0 chr3R 4064334 4064359 -23840694 + AT_rich Low_complexity Low_complexity 1 25 0 4 616 387 160 92 24 chr3R 4065644 4065822 -23839231 + TC1-2_DM DNA Tc1 1397 1627 -17 4 616 21 36 0 0 chr3R 4066488 4066516 -23838537 + AT_rich Low_complexity Low_complexity 1 28 0 4 616 37 52 0 0 chr3R 4066529 4066587 -23838466 + AT_rich Low_complexity Low_complexity 1 58 0 4 616 21 0 0 0 chr3R 4068889 4068910 -23836143 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 21 0 0 0 chr3R 4073537 4073558 -23831495 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 230 81 27 0 chr3R 4073985 4074022 -23831031 + (TCTA)n Simple_repeat Simple_repeat 3 40 0 4 616 229 292 15 0 chr3R 4077358 4077423 -23827630 + (CCG)n Simple_repeat Simple_repeat 2 67 0 4 616 22 70 0 0 chr3R 4077636 4077679 -23827374 + AT_rich Low_complexity Low_complexity 1 43 0 4 616 202 214 0 0 chr3R 4081668 4081710 -23823343 + (ATG)n Simple_repeat Simple_repeat 3 44 0 4 616 23 54 0 0 chr3R 4083782 4083819 -23821234 + AT_rich Low_complexity Low_complexity 1 37 0 4 616 232 171 22 109 chr3R 4084364 4084456 -23820597 + ROO_I LTR Pao 649 732 -7524 4 616 192 77 0 0 chr3R 4084484 4084510 -23820543 + (CAA)n Simple_repeat Simple_repeat 1 26 0 4 616 22 0 0 0 chr3R 4084729 4084751 -23820302 + AT_rich Low_complexity Low_complexity 1 22 0 4 616 22 0 0 0 chr3R 4086513 4086535 -23818518 + AT_rich Low_complexity Low_complexity 1 22 0 4 616 706 117 0 19 chr3R 4087368 4087473 -23817580 - PROTOP_B DNA P -1022 131 29 4 616 21 0 0 0 chr3R 4087938 4087959 -23817094 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 24 0 0 0 chr3R 4090533 4090557 -23814496 + AT_rich Low_complexity Low_complexity 1 24 0 4 616 186 174 0 0 chr3R 4098106 4098152 -23806901 + A-rich Low_complexity Low_complexity 1 46 0 4 616 223 194 16 31 chr3R 4105633 4105697 -23799356 + (TATAA)n Simple_repeat Simple_repeat 2 64 0 4 616 28 0 0 0 chr3R 4105744 4105772 -23799281 + AT_rich Low_complexity Low_complexity 1 28 0 4 616 252 59 0 0 chr3R 4105882 4105916 -23799137 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 4 616 242 272 12 12 chr3R 4106745 4106827 -23798226 + (CAG)n Simple_repeat Simple_repeat 1 82 0 4 616 29 47 0 0 chr3R 4111430 4111473 -23793580 + AT_rich Low_complexity Low_complexity 1 43 0 4 616 27 0 0 0 chr3R 4112473 4112500 -23792553 + AT_rich Low_complexity Low_complexity 1 27 0 4 616 24 53 0 0 chr3R 4119560 4119598 -23785455 + AT_rich Low_complexity Low_complexity 1 38 0 4 616 252 59 0 0 chr3R 4125766 4125800 -23779253 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 616 239 194 0 29 chr3R 4126275 4126344 -23778709 + (TGGA)n Simple_repeat Simple_repeat 1 67 0 4 616 25 31 0 0 chr3R 4131831 4131863 -23773190 + AT_rich Low_complexity Low_complexity 1 32 0 4 616 306 0 0 0 chr3R 4134565 4134599 -23770454 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 616 24 32 0 0 chr3R 4138780 4138811 -23766242 + AT_rich Low_complexity Low_complexity 1 31 0 4 616 189 0 0 0 chr3R 4149045 4149066 -23755987 + (TCC)n Simple_repeat Simple_repeat 2 22 0 4 616 23 0 0 0 chr3R 4153510 4153533 -23751520 + AT_rich Low_complexity Low_complexity 1 23 0 4 616 28 0 0 0 chr3R 4154669 4154697 -23750356 + AT_rich Low_complexity Low_complexity 1 28 0 4 616 25 0 0 0 chr3R 4155361 4155386 -23749667 + AT_rich Low_complexity Low_complexity 1 25 0 4 616 213 39 0 0 chr3R 4158400 4158426 -23746627 + (A)n Simple_repeat Simple_repeat 1 26 0 4 616 24 0 0 0 chr3R 4159943 4159967 -23745086 + AT_rich Low_complexity Low_complexity 1 24 0 4 616 215 238 0 60 chr3R 4160390 4160457 -23744596 + GA-rich Low_complexity Low_complexity 6 68 0 4 616 41 21 0 0 chr3R 4161115 4161163 -23743890 + AT_rich Low_complexity Low_complexity 1 48 0 4 616 21 57 0 0 chr3R 4161192 4161227 -23743826 + AT_rich Low_complexity Low_complexity 1 35 0 4 616 26 0 0 0 chr3R 4173138 4173164 -23731889 + AT_rich Low_complexity Low_complexity 1 26 0 4 616 23 0 0 0 chr3R 4174997 4175020 -23730033 + AT_rich Low_complexity Low_complexity 1 23 0 4 616 207 0 0 0 chr3R 4177887 4177910 -23727143 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 616 183 42 0 0 chr3R 4178105 4178129 -23726924 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 4 616 336 77 0 44 chr3R 4179528 4179596 -23725457 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 616 214 175 0 0 chr3R 4183484 4183524 -23721529 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 616 31 26 0 0 chr3R 4185691 4185729 -23719324 + AT_rich Low_complexity Low_complexity 1 38 0 4 616 21 0 0 0 chr3R 4186465 4186486 -23718567 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 29 47 0 0 chr3R 4188395 4188438 -23716615 + AT_rich Low_complexity Low_complexity 1 43 0 4 616 254 303 0 0 chr3R 4191692 4191791 -23713262 + (CTG)n Simple_repeat Simple_repeat 3 101 0 4 616 221 140 0 17 chr3R 4192189 4192247 -23712806 + (TTG)n Simple_repeat Simple_repeat 3 59 0 4 616 285 118 0 0 chr3R 4193592 4193643 -23711410 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 616 292 271 23 15 chr3R 4193722 4193853 -23711200 + (CTG)n Simple_repeat Simple_repeat 3 134 0 4 616 249 180 0 0 chr3R 4194131 4194181 -23710872 + (CTG)n Simple_repeat Simple_repeat 3 52 0 4 617 189 147 0 0 chr3R 4195368 4195402 -23709651 + (CACG)n Simple_repeat Simple_repeat 2 35 0 4 617 192 77 0 0 chr3R 4199424 4199450 -23705603 + (CTG)n Simple_repeat Simple_repeat 3 28 0 4 617 26 30 0 0 chr3R 4200458 4200491 -23704562 + AT_rich Low_complexity Low_complexity 1 33 0 4 617 24 0 0 0 chr3R 4202315 4202339 -23702714 + AT_rich Low_complexity Low_complexity 1 24 0 4 617 209 108 27 0 chr3R 4202559 4202596 -23702457 + (CGAA)n Simple_repeat Simple_repeat 1 38 0 4 617 266 0 29 0 chr3R 4202900 4202934 -23702119 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 617 233 75 0 24 chr3R 4202936 4202977 -23702076 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 617 186 191 0 0 chr3R 4206137 4206179 -23698874 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 617 373 265 17 8 chr3R 4207606 4207724 -23697329 + A-rich Low_complexity Low_complexity 6 124 0 4 617 183 114 0 0 chr3R 4207956 4207991 -23697062 + (T)n Simple_repeat Simple_repeat 1 35 0 4 617 189 0 0 0 chr3R 4208233 4208254 -23696799 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 617 195 42 0 0 chr3R 4211026 4211050 -23694003 + (CTG)n Simple_repeat Simple_repeat 1 24 0 4 617 180 0 0 0 chr3R 4211246 4211266 -23693787 + (CTG)n Simple_repeat Simple_repeat 1 20 0 4 617 315 234 64 0 chr3R 4211418 4211512 -23693541 - ROO_I LTR Pao -7517 739 640 4 617 249 119 0 0 chr3R 4214155 4214197 -23690856 + (TTTTTG)n Simple_repeat Simple_repeat 5 46 0 4 617 386 38 0 19 chr3R 4214378 4214431 -23690622 + (CTG)n Simple_repeat Simple_repeat 1 52 0 4 617 180 97 0 0 chr3R 4215646 4215677 -23689376 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 617 221 238 0 60 chr3R 4223840 4223907 -23681146 + (CAGAGA)n Simple_repeat Simple_repeat 5 67 0 4 617 25 31 0 0 chr3R 4227940 4227972 -23677081 + AT_rich Low_complexity Low_complexity 1 32 0 4 617 240 35 0 0 chr3R 4228294 4228323 -23676730 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 617 4017 0 0 0 chr3R 4228784 4229212 -23675841 + ROO_LTR LTR Pao 1 428 0 4 617 74822 1 1 0 chr3R 4229212 4237464 -23667589 + ROO_I LTR Pao 1 8256 0 4 617 4017 0 0 0 chr3R 4237464 4237892 -23667161 + ROO_LTR LTR Pao 1 428 0 4 617 25 0 0 0 chr3R 4239388 4239413 -23665640 + AT_rich Low_complexity Low_complexity 1 25 0 4 617 378 115 0 0 chr3R 4239766 4239827 -23665226 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 617 217 242 15 29 chr3R 4240346 4240414 -23664639 + C-rich Low_complexity Low_complexity 3 69 0 4 617 260 152 15 0 chr3R 4240940 4241006 -23664047 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 617 183 139 0 0 chr3R 4242248 4242284 -23662769 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 617 200 149 21 0 chr3R 4243247 4243294 -23661759 + (ACTG)n Simple_repeat Simple_repeat 4 51 0 4 617 21 0 0 0 chr3R 4246406 4246427 -23658626 + AT_rich Low_complexity Low_complexity 1 21 0 4 617 209 128 0 25 chr3R 4251311 4251351 -23653702 + (TTAAA)n Simple_repeat Simple_repeat 1 39 0 4 617 225 65 0 0 chr3R 4253485 4253516 -23651537 + (TCG)n Simple_repeat Simple_repeat 3 33 0 4 617 30 69 0 0 chr3R 4253729 4253787 -23651266 + AT_rich Low_complexity Low_complexity 1 58 0 4 617 189 147 0 0 chr3R 4254654 4254688 -23650365 + (CAGTT)n Simple_repeat Simple_repeat 3 36 0 4 617 207 0 0 0 chr3R 4256199 4256222 -23648831 + (CAG)n Simple_repeat Simple_repeat 1 23 0 4 617 189 0 0 0 chr3R 4256807 4256828 -23648225 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 617 273 264 11 22 chr3R 4260365 4260454 -23644599 + (TTG)n Simple_repeat Simple_repeat 3 90 0 4 617 201 74 0 0 chr3R 4262013 4262040 -23643013 + (TGG)n Simple_repeat Simple_repeat 3 29 0 4 617 321 26 0 0 chr3R 4262528 4262566 -23642487 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 617 28 48 0 0 chr3R 4265785 4265827 -23639226 + AT_rich Low_complexity Low_complexity 1 42 0 4 617 205 171 0 0 chr3R 4266070 4266105 -23638948 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 617 288 0 0 0 chr3R 4266452 4266484 -23638569 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 617 227 241 0 0 chr3R 4269167 4269250 -23635803 - ROO_I LTR Pao -7523 733 651 4 617 208 259 25 0 chr3R 4269791 4269872 -23635181 + T-rich Low_complexity Low_complexity 2 84 0 4 617 270 95 0 0 chr3R 4270931 4270973 -23634080 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 617 22 0 0 0 chr3R 4271422 4271444 -23633609 + AT_rich Low_complexity Low_complexity 1 22 0 4 617 23 33 0 0 chr3R 4271592 4271622 -23633431 + AT_rich Low_complexity Low_complexity 1 30 0 4 617 195 162 0 0 chr3R 4272399 4272436 -23632617 + (AGGTG)n Simple_repeat Simple_repeat 1 37 0 4 617 195 42 0 0 chr3R 4273309 4273333 -23631720 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 617 507 60 0 0 chr3R 4274839 4274906 -23630147 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 4 617 195 42 0 0 chr3R 4275756 4275780 -23629273 + (T)n Simple_repeat Simple_repeat 1 24 0 4 617 201 154 0 0 chr3R 4276101 4276140 -23628913 + (GTATG)n Simple_repeat Simple_repeat 5 43 0 4 617 231 61 0 0 chr3R 4278248 4278281 -23626772 + (A)n Simple_repeat Simple_repeat 1 33 0 4 617 288 53 0 0 chr3R 4278834 4278872 -23626181 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 617 213 39 0 0 chr3R 4283106 4283132 -23621921 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 617 186 103 0 0 chr3R 4283436 4283465 -23621588 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 4 617 191 0 103 0 chr3R 4286013 4286052 -23619001 + (TGG)n Simple_repeat Simple_repeat 2 44 0 4 617 243 0 0 0 chr3R 4287759 4287786 -23617267 + (CAG)n Simple_repeat Simple_repeat 3 29 0 4 617 31 26 0 0 chr3R 4287954 4287992 -23617061 + AT_rich Low_complexity Low_complexity 1 38 0 4 617 24 0 0 0 chr3R 4288969 4288993 -23616060 + AT_rich Low_complexity Low_complexity 1 24 0 4 617 24 0 0 0 chr3R 4289175 4289199 -23615854 + AT_rich Low_complexity Low_complexity 1 24 0 4 617 248 158 18 0 chr3R 4290711 4290768 -23614285 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 617 203 0 37 0 chr3R 4291004 4291031 -23614022 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 617 342 67 0 0 chr3R 4295327 4295372 -23609681 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 617 283 146 0 0 chr3R 4295883 4295938 -23609115 - ROO_I LTR Pao -7543 713 659 4 617 246 81 0 0 chr3R 4300026 4300063 -23604990 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 617 225 0 0 0 chr3R 4301161 4301186 -23603867 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 617 186 143 0 0 chr3R 4302959 4302994 -23602059 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 617 189 0 0 0 chr3R 4304368 4304389 -23600664 + (CAG)n Simple_repeat Simple_repeat 1 21 0 4 617 21 36 0 0 chr3R 4304568 4304596 -23600457 + AT_rich Low_complexity Low_complexity 1 28 0 4 617 183 80 0 0 chr3R 4304946 4304971 -23600082 + (CAA)n Simple_repeat Simple_repeat 2 26 0 4 617 180 0 0 0 chr3R 4307964 4307984 -23597069 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 617 34 42 0 0 chr3R 4308139 4308187 -23596866 + AT_rich Low_complexity Low_complexity 1 48 0 4 617 235 219 0 0 chr3R 4310239 4310303 -23594750 + ROO_I LTR Pao 677 740 -7516 4 617 252 0 0 0 chr3R 4311288 4311316 -23593737 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 617 211 226 0 19 chr3R 4313649 4313703 -23591350 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 617 219 114 0 0 chr3R 4314136 4314171 -23590882 + (TTCGG)n Simple_repeat Simple_repeat 5 39 0 4 617 246 62 0 0 chr3R 4314832 4314864 -23590189 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 617 231 36 0 0 chr3R 4315369 4315397 -23589656 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 617 216 143 0 0 chr3R 4315644 4315686 -23589367 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 617 189 0 0 0 chr3R 4315939 4315960 -23589093 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 617 222 160 0 0 chr3R 4317007 4317057 -23587996 + (CAGAG)n Simple_repeat Simple_repeat 3 52 0 4 617 198 0 0 0 chr3R 4320021 4320043 -23585010 + (TCTCG)n Simple_repeat Simple_repeat 3 24 0 4 617 201 234 0 0 chr3R 4321589 4321636 -23583417 + (CAG)n Simple_repeat Simple_repeat 3 49 0 4 617 231 254 14 0 chr3R 4321906 4321977 -23583076 + (CCCA)n Simple_repeat Simple_repeat 1 72 0 4 617 216 0 0 0 chr3R 4323406 4323430 -23581623 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 617 209 204 0 0 chr3R 4324863 4324907 -23580146 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 618 21 0 0 0 chr3R 4326167 4326188 -23578865 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 24 32 0 0 chr3R 4327100 4327131 -23577922 + AT_rich Low_complexity Low_complexity 1 31 0 4 618 21 0 0 0 chr3R 4327705 4327726 -23577327 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 258 300 12 0 chr3R 4328291 4328371 -23576682 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 618 25 0 0 0 chr3R 4329596 4329621 -23575432 + AT_rich Low_complexity Low_complexity 1 25 0 4 618 21 0 0 0 chr3R 4332139 4332160 -23572893 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 22 0 0 0 chr3R 4339364 4339386 -23565667 + AT_rich Low_complexity Low_complexity 1 22 0 4 618 26 0 0 0 chr3R 4340290 4340316 -23564737 + AT_rich Low_complexity Low_complexity 1 26 0 4 618 450 248 98 32 chr3R 4340344 4340612 -23564441 + SAR_DM Satellite Satellite 1 285 -754 4 618 420 216 76 40 chr3R 4340492 4340690 -23564363 - XDMR Unknown Unknown -43 318 114 4 618 25 51 0 0 chr3R 4342712 4342751 -23562302 + AT_rich Low_complexity Low_complexity 1 39 0 4 618 25 0 0 0 chr3R 4347088 4347113 -23557940 + AT_rich Low_complexity Low_complexity 1 25 0 4 618 29 47 0 0 chr3R 4349248 4349291 -23555762 + AT_rich Low_complexity Low_complexity 1 43 0 4 618 22 0 0 0 chr3R 4352198 4352220 -23552833 + AT_rich Low_complexity Low_complexity 1 22 0 4 618 23 54 0 0 chr3R 4353816 4353853 -23551200 + AT_rich Low_complexity Low_complexity 1 37 0 4 618 23 33 0 0 chr3R 4356139 4356169 -23548884 + AT_rich Low_complexity Low_complexity 1 30 0 4 618 183 80 0 0 chr3R 4357120 4357145 -23547908 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 618 21 36 0 0 chr3R 4359447 4359475 -23545578 + AT_rich Low_complexity Low_complexity 1 28 0 4 618 32 0 0 0 chr3R 4359548 4359580 -23545473 + AT_rich Low_complexity Low_complexity 1 32 0 4 618 180 0 0 0 chr3R 4360239 4360259 -23544794 + (ATTTG)n Simple_repeat Simple_repeat 1 20 0 4 618 180 0 0 0 chr3R 4363491 4363511 -23541542 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 618 22 0 0 0 chr3R 4365016 4365038 -23540015 + AT_rich Low_complexity Low_complexity 1 22 0 4 618 239 228 0 17 chr3R 4368004 4368062 -23536991 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 618 216 0 0 0 chr3R 4368771 4368795 -23536258 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 618 198 118 0 0 chr3R 4370085 4370119 -23534934 + (T)n Simple_repeat Simple_repeat 1 34 0 4 618 233 169 0 33 chr3R 4371579 4371640 -23533413 + (CCCA)n Simple_repeat Simple_repeat 3 61 0 4 618 203 229 21 0 chr3R 4374452 4374500 -23530553 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 618 22 35 0 0 chr3R 4376898 4376927 -23528126 + AT_rich Low_complexity Low_complexity 1 29 0 4 618 249 108 0 0 chr3R 4377213 4377250 -23527803 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 618 32 26 0 0 chr3R 4379374 4379413 -23525640 + AT_rich Low_complexity Low_complexity 1 39 0 4 618 195 167 0 0 chr3R 4380546 4380588 -23524465 + A-rich Low_complexity Low_complexity 1 42 0 4 618 209 128 21 0 chr3R 4384092 4384139 -23520914 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 618 23 33 0 0 chr3R 4384426 4384456 -23520597 + AT_rich Low_complexity Low_complexity 1 30 0 4 618 24 0 0 0 chr3R 4394563 4394587 -23510466 + AT_rich Low_complexity Low_complexity 1 24 0 4 618 2316 8 0 0 chr3R 4396254 4396520 -23508533 - DMLTR5 LTR Gypsy 0 266 1 4 618 16623 1 0 0 chr3R 4396520 4398441 -23506612 - HMSBEAGLE_I LTR Gypsy 0 6529 4609 4 618 7819 0 0 0 chr3R 4398431 4399325 -23505728 - HMSBEAGLE_I LTR Gypsy -4064 2465 1572 4 618 2315 4 0 0 chr3R 4399321 4399598 -23505455 - HMSBEAGLE_I LTR Gypsy -5284 1245 969 4 618 974 29 52 12 chr3R 4399598 4399770 -23505283 + (TAA)n Simple_repeat Simple_repeat 1 179 0 4 618 6565 1 0 2 chr3R 4399770 4400568 -23504485 - HMSBEAGLE_I LTR Gypsy -5733 796 1 4 618 2316 8 0 0 chr3R 4400567 4400833 -23504220 - DMLTR5 LTR Gypsy 0 266 1 4 618 194 57 0 54 chr3R 4400971 4401008 -23504045 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 4 618 48 43 0 0 chr3R 4403492 4403561 -23501492 + AT_rich Low_complexity Low_complexity 1 69 0 4 618 27 0 0 0 chr3R 4404238 4404265 -23500788 + AT_rich Low_complexity Low_complexity 1 27 0 4 618 21 0 0 0 chr3R 4406412 4406433 -23498620 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 38 0 0 0 chr3R 4407411 4407449 -23497604 + AT_rich Low_complexity Low_complexity 1 38 0 4 618 22 56 0 0 chr3R 4407737 4407773 -23497280 + AT_rich Low_complexity Low_complexity 1 36 0 4 618 189 175 0 0 chr3R 4408738 4408778 -23496275 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 618 192 77 0 0 chr3R 4409398 4409424 -23495629 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 618 205 211 0 0 chr3R 4413712 4413750 -23491303 + T-rich Low_complexity Low_complexity 1 38 0 4 618 21 0 0 0 chr3R 4415015 4415036 -23490017 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 219 154 0 0 chr3R 4415171 4415210 -23489843 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 618 318 138 0 0 chr3R 4415437 4415495 -23489558 + (CAGT)n Simple_repeat Simple_repeat 4 61 0 4 618 25 31 0 0 chr3R 4419785 4419817 -23485236 + AT_rich Low_complexity Low_complexity 1 32 0 4 618 233 209 0 0 chr3R 4420643 4420686 -23484367 + (TTG)n Simple_repeat Simple_repeat 3 45 0 4 618 24 32 0 0 chr3R 4420814 4420845 -23484208 + AT_rich Low_complexity Low_complexity 1 31 0 4 618 208 195 48 12 chr3R 4420963 4421046 -23484007 + (TATAA)n Simple_repeat Simple_repeat 2 87 0 4 618 198 0 0 0 chr3R 4423178 4423200 -23481853 + (CAGAA)n Simple_repeat Simple_repeat 4 25 0 4 618 3766 0 0 0 chr3R 4427543 4427971 -23477082 - ROO_LTR LTR Pao 0 428 1 4 618 70207 1 2 0 chr3R 4427971 4436210 -23468843 - ROO_I LTR Pao 0 8256 1 4 618 3766 0 0 0 chr3R 4436210 4436638 -23468415 - ROO_LTR LTR Pao 0 428 1 4 618 183 80 0 0 chr3R 4438082 4438107 -23466946 + (CAGC)n Simple_repeat Simple_repeat 3 27 0 4 618 35 24 0 0 chr3R 4438788 4438830 -23466223 + AT_rich Low_complexity Low_complexity 1 42 0 4 618 214 200 0 0 chr3R 4440394 4440434 -23464619 + (ATG)n Simple_repeat Simple_repeat 1 40 0 4 618 213 132 0 0 chr3R 4441634 4441672 -23463381 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 618 180 0 0 0 chr3R 4442045 4442065 -23462988 + (ATAAG)n Simple_repeat Simple_repeat 3 22 0 4 618 243 175 53 0 chr3R 4443860 4443917 -23461136 + A-rich Low_complexity Low_complexity 2 61 0 4 618 22 0 0 0 chr3R 4446633 4446655 -23458398 + GC_rich Low_complexity Low_complexity 1 22 0 4 618 32 0 0 0 chr3R 4450808 4450840 -23454213 + AT_rich Low_complexity Low_complexity 1 32 0 4 618 21 36 0 0 chr3R 4455552 4455580 -23449473 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 215 79 26 0 chr3R 4457560 4457598 -23447455 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 619 22 0 0 0 chr3R 4461840 4461862 -23443191 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 24 32 0 0 chr3R 4463472 4463503 -23441550 + AT_rich Low_complexity Low_complexity 1 31 0 4 619 216 0 0 0 chr3R 4466595 4466619 -23438434 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 4 619 30 59 0 0 chr3R 4468372 4468423 -23436630 + AT_rich Low_complexity Low_complexity 1 51 0 4 619 25 0 0 0 chr3R 4471637 4471662 -23433391 + AT_rich Low_complexity Low_complexity 1 25 0 4 619 21 0 0 0 chr3R 4473657 4473678 -23431375 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 22 0 0 0 chr3R 4480772 4480794 -23424259 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 381 129 0 0 chr3R 4480882 4480952 -23424101 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 619 183 42 0 0 chr3R 4481449 4481473 -23423580 + (CTG)n Simple_repeat Simple_repeat 1 24 0 4 619 226 300 0 0 chr3R 4481547 4481617 -23423436 + (CCG)n Simple_repeat Simple_repeat 2 71 0 4 619 265 316 9 9 chr3R 4483759 4483874 -23421179 + (CCG)n Simple_repeat Simple_repeat 3 117 0 4 619 21 71 0 0 chr3R 4491576 4491618 -23413435 + AT_rich Low_complexity Low_complexity 1 42 0 4 619 194 0 0 37 chr3R 4493475 4493502 -23411551 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 4 619 222 232 12 47 chr3R 4496182 4496268 -23408785 + (CATA)n Simple_repeat Simple_repeat 4 86 0 4 619 223 167 0 77 chr3R 4499531 4499622 -23405431 + (CTTTG)n Simple_repeat Simple_repeat 5 88 0 4 619 28 0 0 0 chr3R 4499674 4499702 -23405351 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 27 49 0 0 chr3R 4499715 4499756 -23405297 + AT_rich Low_complexity Low_complexity 1 41 0 4 619 31 44 0 0 chr3R 4507330 4507375 -23397678 + AT_rich Low_complexity Low_complexity 1 45 0 4 619 38 68 0 0 chr3R 4509836 4509909 -23395144 + AT_rich Low_complexity Low_complexity 1 73 0 4 619 183 42 0 0 chr3R 4513321 4513345 -23391708 + (TTTTTG)n Simple_repeat Simple_repeat 5 28 0 4 619 26 30 0 0 chr3R 4513909 4513942 -23391111 + AT_rich Low_complexity Low_complexity 1 33 0 4 619 183 156 0 0 chr3R 4517838 4517870 -23387183 + (CTG)n Simple_repeat Simple_repeat 1 32 0 4 619 239 234 13 13 chr3R 4519511 4519589 -23385464 + (CTG)n Simple_repeat Simple_repeat 3 80 0 4 619 186 71 0 0 chr3R 4519670 4519698 -23385355 + (CTG)n Simple_repeat Simple_repeat 2 29 0 4 619 290 264 0 0 chr3R 4519974 4520046 -23385007 + T-rich Low_complexity Low_complexity 1 72 0 4 619 21 0 0 0 chr3R 4522087 4522108 -23382945 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 218 178 0 43 chr3R 4523857 4523904 -23381149 + (CTCA)n Simple_repeat Simple_repeat 3 47 0 4 619 34 24 0 0 chr3R 4527577 4527618 -23377435 + AT_rich Low_complexity Low_complexity 1 41 0 4 619 210 122 0 47 chr3R 4528172 4528215 -23376838 + A-rich Low_complexity Low_complexity 1 41 0 4 619 24 32 0 0 chr3R 4529383 4529414 -23375639 + AT_rich Low_complexity Low_complexity 1 31 0 4 619 207 200 0 0 chr3R 4529772 4529817 -23375236 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 619 34 24 0 0 chr3R 4530097 4530138 -23374915 + AT_rich Low_complexity Low_complexity 1 41 0 4 619 21 0 0 0 chr3R 4530896 4530917 -23374136 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 270 271 0 0 chr3R 4531453 4531538 -23373515 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 619 27 0 0 0 chr3R 4531655 4531682 -23373371 + AT_rich Low_complexity Low_complexity 1 27 0 4 619 240 35 0 0 chr3R 4533132 4533161 -23371892 + (T)n Simple_repeat Simple_repeat 1 29 0 4 619 1396 0 0 6 chr3R 4533182 4533346 -23371707 - LINEJ1_DM LINE Jockey -13 5007 4845 4 619 19984 8 1 0 chr3R 4533346 4535508 -23369545 - LINEJ1_DM LINE Jockey -2848 2172 10 4 619 192 111 0 0 chr3R 4535648 4535684 -23369369 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 619 43 20 0 0 chr3R 4535988 4536038 -23369015 + AT_rich Low_complexity Low_complexity 1 50 0 4 619 218 200 0 0 chr3R 4536770 4536815 -23368238 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 619 206 137 19 38 chr3R 4537799 4537852 -23367201 + (TAA)n Simple_repeat Simple_repeat 3 54 0 4 619 21 36 0 0 chr3R 4538451 4538479 -23366574 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 202 219 0 63 chr3R 4538484 4538611 -23366442 + (TTTA)n Simple_repeat Simple_repeat 1 119 0 4 619 23 0 0 0 chr3R 4539515 4539538 -23365515 + AT_rich Low_complexity Low_complexity 1 23 0 4 619 209 232 0 18 chr3R 4542234 4542291 -23362762 + GA-rich Low_complexity Low_complexity 3 58 0 4 619 21 0 0 0 chr3R 4544550 4544571 -23360482 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 68 48 0 0 chr3R 4557586 4557689 -23347364 + AT_rich Low_complexity Low_complexity 1 103 0 4 619 21 71 0 0 chr3R 4560478 4560520 -23344533 + AT_rich Low_complexity Low_complexity 1 42 0 4 619 21 36 0 0 chr3R 4562173 4562201 -23342852 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 22 0 0 0 chr3R 4571513 4571535 -23333518 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 411 162 8 25 chr3R 4581679 4581799 -23323254 + (TTG)n Simple_repeat Simple_repeat 1 118 0 4 619 22 0 0 0 chr3R 4582255 4582277 -23322776 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 31 26 0 0 chr3R 4584864 4584902 -23320151 + AT_rich Low_complexity Low_complexity 1 38 0 4 620 25 0 0 0 chr3R 4589140 4589165 -23315888 + AT_rich Low_complexity Low_complexity 1 25 0 4 620 232 250 0 14 chr3R 4589411 4589484 -23315569 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 620 29 28 0 0 chr3R 4589618 4589654 -23315399 + AT_rich Low_complexity Low_complexity 1 36 0 4 620 22 35 0 0 chr3R 4596913 4596942 -23308111 + AT_rich Low_complexity Low_complexity 1 29 0 4 620 267 79 0 0 chr3R 4599750 4599788 -23305265 + (CCA)n Simple_repeat Simple_repeat 2 39 0 4 620 24 53 0 0 chr3R 4611936 4611974 -23293079 + AT_rich Low_complexity Low_complexity 1 38 0 4 620 22 0 0 0 chr3R 4615696 4615718 -23289335 + AT_rich Low_complexity Low_complexity 1 22 0 4 620 207 125 0 0 chr3R 4616602 4616642 -23288411 + (CATCC)n Simple_repeat Simple_repeat 5 44 0 4 620 21 57 0 0 chr3R 4617174 4617209 -23287844 + AT_rich Low_complexity Low_complexity 1 35 0 4 620 180 0 0 0 chr3R 4618333 4618353 -23286700 + (TGAG)n Simple_repeat Simple_repeat 3 22 0 4 620 21 0 0 0 chr3R 4620043 4620064 -23284989 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 189 0 0 0 chr3R 4625253 4625274 -23279779 + (CTCA)n Simple_repeat Simple_repeat 3 23 0 4 620 26 0 0 0 chr3R 4631471 4631497 -23273556 + AT_rich Low_complexity Low_complexity 1 26 0 4 620 33 0 0 0 chr3R 4636942 4636975 -23268078 + AT_rich Low_complexity Low_complexity 1 33 0 4 620 193 53 0 73 chr3R 4639936 4639977 -23265076 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 4 620 26 50 0 0 chr3R 4640820 4640860 -23264193 + AT_rich Low_complexity Low_complexity 1 40 0 4 620 36 23 0 0 chr3R 4642755 4642798 -23262255 + AT_rich Low_complexity Low_complexity 1 43 0 4 620 225 227 0 26 chr3R 4643364 4643441 -23261612 + T-rich Low_complexity Low_complexity 4 78 0 4 620 183 167 0 0 chr3R 4644046 4644088 -23260965 + (CTG)n Simple_repeat Simple_repeat 1 42 0 4 620 186 71 0 0 chr3R 4645970 4645998 -23259055 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 620 21 36 0 0 chr3R 4649791 4649819 -23255234 + AT_rich Low_complexity Low_complexity 1 28 0 4 620 21 57 0 0 chr3R 4649951 4649986 -23255067 + AT_rich Low_complexity Low_complexity 1 35 0 4 620 24 0 0 0 chr3R 4653643 4653667 -23251386 + AT_rich Low_complexity Low_complexity 1 24 0 4 620 216 167 0 0 chr3R 4657593 4657641 -23247412 + (ATTG)n Simple_repeat Simple_repeat 3 50 0 4 620 201 373 0 0 chr3R 4659356 4659415 -23245638 + G-rich Low_complexity Low_complexity 3 61 0 4 620 189 0 0 0 chr3R 4660278 4660299 -23244754 + (CTG)n Simple_repeat Simple_repeat 1 21 0 4 620 189 94 0 0 chr3R 4660949 4660981 -23244072 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 620 229 316 0 0 chr3R 4662362 4662438 -23242615 - ROO_I LTR Pao -7505 751 676 4 620 231 133 0 0 chr3R 4662701 4662746 -23242307 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 620 23 54 0 0 chr3R 4664718 4664755 -23240298 + AT_rich Low_complexity Low_complexity 1 37 0 4 620 26 30 0 0 chr3R 4666681 4666714 -23238339 + AT_rich Low_complexity Low_complexity 1 33 0 4 620 243 61 0 0 chr3R 4672703 4672736 -23232317 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 620 246 32 0 0 chr3R 4672898 4672929 -23232124 + (AACTG)n Simple_repeat Simple_repeat 4 34 0 4 620 33 43 0 0 chr3R 4674621 4674668 -23230385 + AT_rich Low_complexity Low_complexity 1 47 0 4 620 189 0 0 0 chr3R 4677260 4677281 -23227772 + (A)n Simple_repeat Simple_repeat 1 21 0 4 620 23 78 0 0 chr3R 4678589 4678640 -23226413 + AT_rich Low_complexity Low_complexity 1 51 0 4 620 183 42 0 0 chr3R 4679815 4679839 -23225214 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 620 261 83 0 0 chr3R 4682018 4682054 -23222999 + (T)n Simple_repeat Simple_repeat 1 36 0 4 620 222 37 0 0 chr3R 4683650 4683677 -23221376 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 620 31 68 0 0 chr3R 4683883 4683942 -23221111 + AT_rich Low_complexity Low_complexity 1 59 0 4 620 24 32 0 0 chr3R 4686445 4686476 -23218577 + AT_rich Low_complexity Low_complexity 1 31 0 4 620 21 0 0 0 chr3R 4687703 4687724 -23217329 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 240 169 0 0 chr3R 4688100 4688159 -23216894 - ROO_I LTR Pao -7557 699 641 4 620 27 0 0 0 chr3R 4688953 4688980 -23216073 + AT_rich Low_complexity Low_complexity 1 27 0 4 620 21 0 0 0 chr3R 4691029 4691050 -23214003 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 192 77 0 0 chr3R 4691426 4691452 -23213601 + (CAT)n Simple_repeat Simple_repeat 3 28 0 4 620 214 165 81 12 chr3R 4692777 4692863 -23212190 + (TTTA)n Simple_repeat Simple_repeat 4 95 0 4 620 28 61 0 0 chr3R 4693506 4693555 -23211498 + AT_rich Low_complexity Low_complexity 1 49 0 4 620 266 73 0 24 chr3R 4694530 4694572 -23210481 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 620 3515 5 7 7 chr3R 4694572 4694985 -23210068 + DM297_LTR LTR Gypsy 2 414 0 4 620 18757 5 0 2 chr3R 4694985 4697176 -23207877 + DM297_I LTR Gypsy 1 2187 -3980 4 620 6374 9 0 0 chr3R 4697170 4697944 -23207109 + DM297_I LTR Gypsy 5394 6167 0 4 620 3523 5 7 7 chr3R 4697944 4698358 -23206695 + DM297_LTR LTR Gypsy 1 414 0 4 620 23 33 0 0 chr3R 4698569 4698599 -23206454 + AT_rich Low_complexity Low_complexity 1 30 0 4 620 21 0 0 0 chr3R 4699218 4699239 -23205814 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 21 0 0 0 chr3R 4700717 4700738 -23204315 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 182 59 0 81 chr3R 4703152 4703189 -23201864 + (TAAAAA)n Simple_repeat Simple_repeat 5 38 0 4 620 26 0 0 0 chr3R 4703775 4703801 -23201252 + AT_rich Low_complexity Low_complexity 1 26 0 4 620 309 26 0 0 chr3R 4707383 4707421 -23197632 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 620 195 42 0 0 chr3R 4708209 4708233 -23196820 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 620 189 107 0 0 chr3R 4708386 4708414 -23196639 + (TATG)n Simple_repeat Simple_repeat 4 31 0 4 620 285 51 0 0 chr3R 4710073 4710112 -23194941 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 620 24 0 0 0 chr3R 4716692 4716716 -23188337 + AT_rich Low_complexity Low_complexity 1 24 0 4 620 33 0 0 0 chr3R 4716779 4716812 -23188241 + AT_rich Low_complexity Low_complexity 1 33 0 4 620 206 121 0 0 chr3R 4717010 4717043 -23188010 + (A)n Simple_repeat Simple_repeat 1 33 0 4 620 23 33 0 0 chr3R 4718376 4718406 -23186647 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 208 122 102 0 chr3R 4719339 4719388 -23185665 + (GCTTG)n Simple_repeat Simple_repeat 3 56 0 4 621 9467 13 8 0 chr3R 4720649 4721745 -23183308 - PROTOP_A DNA P 0 1105 1 4 621 23 0 0 0 chr3R 4723637 4723660 -23181393 + AT_rich Low_complexity Low_complexity 1 23 0 4 621 3368 5 7 7 chr3R 4723997 4724411 -23180642 + DM297_LTR LTR Gypsy 1 414 0 4 621 671 23 11 0 chr3R 4724411 4724498 -23180555 + DM297_I LTR Gypsy 1 88 -6079 4 621 2667 39 0 0 chr3R 4724498 4724834 -23180219 + DM1731_LTR LTR Copia 1 336 0 4 621 34119 6 1 1 chr3R 4724834 4728810 -23176243 + DM1731_I LTR Copia 1 3976 0 4 621 2667 39 0 0 chr3R 4728810 4729146 -23175907 + DM1731_LTR LTR Copia 1 336 0 4 621 8302 4 0 4 chr3R 4729146 4730157 -23174896 + DM297_I LTR Gypsy 84 1090 -5077 4 621 3245 10 0 0 chr3R 4730148 4730537 -23174516 + DM297_I LTR Gypsy 3942 4330 -1837 4 621 9371 9 0 0 chr3R 4730535 4731690 -23173363 + DM297_I LTR Gypsy 5013 6167 0 4 621 3368 5 7 7 chr3R 4731690 4732104 -23172949 + DM297_LTR LTR Gypsy 1 414 0 4 621 3054 3 0 24 chr3R 4732110 4732486 -23172567 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 621 54520 1 0 11 chr3R 4732486 4739146 -23165907 + ROVER-I_DM LTR Gypsy 1 6584 0 4 621 3054 3 0 24 chr3R 4739146 4739522 -23165531 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 621 180 0 0 0 chr3R 4739806 4739826 -23165227 + (GAATG)n Simple_repeat Simple_repeat 5 24 0 4 621 29 60 0 0 chr3R 4741004 4741054 -23163999 + AT_rich Low_complexity Low_complexity 1 50 0 4 621 25 51 0 0 chr3R 4744129 4744168 -23160885 + AT_rich Low_complexity Low_complexity 1 39 0 4 621 299 227 0 60 chr3R 4745049 4745166 -23159887 - ROO_I LTR Pao -7514 742 633 4 621 238 224 0 0 chr3R 4748419 4748468 -23156585 + A-rich Low_complexity Low_complexity 1 49 0 4 621 186 103 0 0 chr3R 4753054 4753083 -23151970 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 4 621 189 0 0 0 chr3R 4755542 4755563 -23149490 + (T)n Simple_repeat Simple_repeat 1 21 0 4 621 21 36 0 0 chr3R 4759352 4759380 -23145673 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 27 49 0 0 chr3R 4760573 4760614 -23144439 + AT_rich Low_complexity Low_complexity 1 41 0 4 621 32 75 0 0 chr3R 4761526 4761593 -23143460 + AT_rich Low_complexity Low_complexity 1 67 0 4 621 21 36 0 0 chr3R 4764087 4764115 -23140938 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 26 0 0 0 chr3R 4765299 4765325 -23139728 + AT_rich Low_complexity Low_complexity 1 26 0 4 621 211 217 0 77 chr3R 4768493 4768558 -23136495 + A-rich Low_complexity Low_complexity 2 61 0 4 621 23 54 0 0 chr3R 4770947 4770984 -23134069 + AT_rich Low_complexity Low_complexity 1 37 0 4 621 30 45 0 0 chr3R 4771033 4771077 -23133976 + AT_rich Low_complexity Low_complexity 1 44 0 4 621 22 56 0 0 chr3R 4771176 4771212 -23133841 + AT_rich Low_complexity Low_complexity 1 36 0 4 621 219 241 0 0 chr3R 4771386 4771440 -23133613 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 621 23 54 0 0 chr3R 4772223 4772260 -23132793 + AT_rich Low_complexity Low_complexity 1 37 0 4 621 231 114 0 0 chr3R 4773693 4773728 -23131325 + (CAA)n Simple_repeat Simple_repeat 1 35 0 4 621 27 96 0 0 chr3R 4773937 4774020 -23131033 + AT_rich Low_complexity Low_complexity 1 83 0 4 621 207 0 0 0 chr3R 4774091 4774114 -23130939 + (GGA)n Simple_repeat Simple_repeat 3 25 0 4 621 29 0 0 0 chr3R 4774737 4774766 -23130287 + AT_rich Low_complexity Low_complexity 1 29 0 4 621 393 58 0 0 chr3R 4775161 4775213 -23129840 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 621 237 65 0 0 chr3R 4775590 4775621 -23129432 + (GTTTG)n Simple_repeat Simple_repeat 2 32 0 4 621 31 0 0 0 chr3R 4775957 4775988 -23129065 + AT_rich Low_complexity Low_complexity 1 31 0 4 621 267 103 0 0 chr3R 4778072 4778111 -23126942 + (CTG)n Simple_repeat Simple_repeat 1 39 0 4 621 25 95 0 0 chr3R 4780760 4780834 -23124219 + AT_rich Low_complexity Low_complexity 1 74 0 4 621 209 189 0 0 chr3R 4780981 4781018 -23124035 + CT-rich Low_complexity Low_complexity 1 37 0 4 621 25 0 0 0 chr3R 4781768 4781793 -23123260 + AT_rich Low_complexity Low_complexity 1 25 0 4 621 303 28 0 0 chr3R 4785106 4785142 -23119911 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 621 198 0 0 0 chr3R 4785150 4785172 -23119881 + (TTA)n Simple_repeat Simple_repeat 2 23 0 4 621 28 61 0 0 chr3R 4785613 4785662 -23119391 + AT_rich Low_complexity Low_complexity 1 49 0 4 621 25 51 0 0 chr3R 4786258 4786297 -23118756 + AT_rich Low_complexity Low_complexity 1 39 0 4 621 23 0 0 0 chr3R 4787987 4788010 -23117043 + AT_rich Low_complexity Low_complexity 1 23 0 4 621 29 28 0 0 chr3R 4789476 4789512 -23115541 + AT_rich Low_complexity Low_complexity 1 36 0 4 621 28 0 0 0 chr3R 4790539 4790567 -23114486 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 23 33 0 0 chr3R 4796071 4796101 -23108952 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 23 68 0 0 chr3R 4796120 4796164 -23108889 + AT_rich Low_complexity Low_complexity 1 44 0 4 621 212 191 24 0 chr3R 4796521 4796563 -23108490 + (TTG)n Simple_repeat Simple_repeat 3 45 0 4 621 210 91 0 0 chr3R 4801979 4802012 -23103041 + (CTG)n Simple_repeat Simple_repeat 3 35 0 4 621 186 71 0 0 chr3R 4802354 4802382 -23102671 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 621 35 0 0 0 chr3R 4802703 4802738 -23102315 + AT_rich Low_complexity Low_complexity 1 35 0 4 621 230 245 0 0 chr3R 4803141 4803190 -23101863 + (CATA)n Simple_repeat Simple_repeat 4 52 0 4 621 28 0 0 0 chr3R 4803324 4803352 -23101701 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 22 0 0 0 chr3R 4803783 4803805 -23101248 + AT_rich Low_complexity Low_complexity 1 22 0 4 621 207 0 0 0 chr3R 4804053 4804076 -23100977 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 621 22 35 0 0 chr3R 4804618 4804647 -23100406 + AT_rich Low_complexity Low_complexity 1 29 0 4 621 27 0 0 0 chr3R 4804689 4804716 -23100337 + AT_rich Low_complexity Low_complexity 1 27 0 4 621 24 53 0 0 chr3R 4810093 4810131 -23094922 + AT_rich Low_complexity Low_complexity 1 38 0 4 621 32 0 0 0 chr3R 4816310 4816342 -23088711 + AT_rich Low_complexity Low_complexity 1 32 0 4 621 23 33 0 0 chr3R 4816505 4816535 -23088518 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 189 0 0 0 chr3R 4817860 4817881 -23087172 + (TCC)n Simple_repeat Simple_repeat 2 22 0 4 621 216 67 0 0 chr3R 4824865 4824895 -23080158 + (GATTG)n Simple_repeat Simple_repeat 5 34 0 4 621 37 0 0 0 chr3R 4836071 4836108 -23068945 + AT_rich Low_complexity Low_complexity 1 37 0 4 621 195 42 0 0 chr3R 4836771 4836795 -23068258 + (CTG)n Simple_repeat Simple_repeat 2 25 0 4 621 229 288 0 0 chr3R 4837519 4837585 -23067468 + (CCG)n Simple_repeat Simple_repeat 1 66 0 4 621 22 0 0 0 chr3R 4842986 4843008 -23062045 + AT_rich Low_complexity Low_complexity 1 22 0 4 621 183 80 0 0 chr3R 4843837 4843862 -23061191 + (CTG)n Simple_repeat Simple_repeat 1 25 0 4 621 23 33 0 0 chr3R 4845887 4845917 -23059136 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 21 57 0 0 chr3R 4849602 4849637 -23055416 + AT_rich Low_complexity Low_complexity 1 35 0 4 622 264 206 0 0 chr3R 4859043 4859106 -23045947 + (CTG)n Simple_repeat Simple_repeat 3 65 0 4 622 183 42 0 0 chr3R 4859373 4859397 -23045656 + (CGAAA)n Simple_repeat Simple_repeat 3 26 0 4 622 21 36 0 0 chr3R 4861601 4861629 -23043424 + AT_rich Low_complexity Low_complexity 1 28 0 4 622 25 0 0 0 chr3R 4873848 4873873 -23031180 + AT_rich Low_complexity Low_complexity 1 25 0 4 622 27 96 0 0 chr3R 4873899 4873982 -23031071 + AT_rich Low_complexity Low_complexity 1 83 0 4 622 21 0 0 0 chr3R 4874011 4874032 -23031021 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 23 33 0 0 chr3R 4874047 4874077 -23030976 + AT_rich Low_complexity Low_complexity 1 30 0 4 622 23 33 0 0 chr3R 4878053 4878083 -23026970 + AT_rich Low_complexity Low_complexity 1 30 0 4 622 238 298 0 0 chr3R 4879384 4879441 -23025612 + (CAA)n Simple_repeat Simple_repeat 1 57 0 4 622 200 280 13 0 chr3R 4880255 4880330 -23024723 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 622 213 224 0 0 chr3R 4881942 4881991 -23023062 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 622 24 67 0 0 chr3R 4883203 4883248 -23021805 + AT_rich Low_complexity Low_complexity 1 45 0 4 622 250 197 16 0 chr3R 4893563 4893624 -23011429 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 622 219 228 0 0 chr3R 4894399 4894456 -23010597 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 622 278 148 19 0 chr3R 4894884 4894938 -23010115 + (CGA)n Simple_repeat Simple_repeat 3 57 0 4 622 183 156 0 0 chr3R 4898171 4898203 -23006850 + (CTG)n Simple_repeat Simple_repeat 3 34 0 4 622 205 184 0 0 chr3R 4898228 4898266 -23006787 + (CTG)n Simple_repeat Simple_repeat 3 40 0 4 622 269 118 20 0 chr3R 4902242 4902293 -23002760 + (CTG)n Simple_repeat Simple_repeat 3 54 0 4 622 195 100 0 0 chr3R 4902669 4902699 -23002354 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 4 622 203 175 0 0 chr3R 4903361 4903401 -23001652 + A-rich Low_complexity Low_complexity 1 40 0 4 622 252 85 85 0 chr3R 4904113 4904172 -23000881 + (TAAAG)n Simple_repeat Simple_repeat 2 65 0 4 622 336 127 0 0 chr3R 4906549 4906604 -22998449 + (CTG)n Simple_repeat Simple_repeat 3 57 0 4 622 270 275 0 0 chr3R 4906635 4906715 -22998338 + (CTG)n Simple_repeat Simple_repeat 2 81 0 4 622 180 77 0 0 chr3R 4907180 4907206 -22997847 + (CAAAT)n Simple_repeat Simple_repeat 2 27 0 4 622 197 65 32 0 chr3R 4909600 4909631 -22995422 + (CAG)n Simple_repeat Simple_repeat 2 33 0 4 622 192 40 0 0 chr3R 4914897 4914922 -22990131 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4 622 215 157 20 0 chr3R 4916249 4916300 -22988753 + (CAA)n Simple_repeat Simple_repeat 2 53 0 4 622 203 184 0 0 chr3R 4916518 4916556 -22988497 + T-rich Low_complexity Low_complexity 5 42 0 4 622 246 116 0 0 chr3R 4918507 4918550 -22986503 + (CAGAC)n Simple_repeat Simple_repeat 5 47 0 4 622 189 0 0 0 chr3R 4920585 4920606 -22984447 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 622 221 171 0 0 chr3R 4922166 4922207 -22982846 + (TTG)n Simple_repeat Simple_repeat 2 42 0 4 622 189 154 0 0 chr3R 4923814 4923853 -22981200 + (TTCGGG)n Simple_repeat Simple_repeat 1 39 0 4 622 180 0 0 0 chr3R 4924362 4924382 -22980671 + (CCA)n Simple_repeat Simple_repeat 2 21 0 4 622 252 0 0 0 chr3R 4926792 4926820 -22978233 + (A)n Simple_repeat Simple_repeat 1 28 0 4 622 21 0 0 0 chr3R 4927522 4927543 -22977510 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 25 65 0 0 chr3R 4927916 4927962 -22977091 + AT_rich Low_complexity Low_complexity 1 46 0 4 622 253 254 0 0 chr3R 4930695 4930758 -22974295 + (CTG)n Simple_repeat Simple_repeat 3 65 0 4 622 231 170 0 0 chr3R 4933667 4933714 -22971339 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 622 180 0 0 0 chr3R 4935289 4935309 -22969744 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 622 215 234 0 0 chr3R 4938406 4938453 -22966600 + (ATG)n Simple_repeat Simple_repeat 1 47 0 4 622 203 184 0 0 chr3R 4939368 4939406 -22965647 + T-rich Low_complexity Low_complexity 1 38 0 4 622 198 0 0 0 chr3R 4940105 4940127 -22964926 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 622 215 190 0 23 chr3R 4940329 4940372 -22964681 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 622 318 98 0 0 chr3R 4942284 4942335 -22962718 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 622 200 220 20 0 chr3R 4943189 4943239 -22961814 + GA-rich Low_complexity Low_complexity 5 55 0 4 622 189 0 0 0 chr3R 4944157 4944178 -22960875 + (T)n Simple_repeat Simple_repeat 1 21 0 4 622 26 30 0 0 chr3R 4945441 4945474 -22959579 + AT_rich Low_complexity Low_complexity 1 33 0 4 622 270 0 0 0 chr3R 4945950 4945980 -22959073 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 622 264 59 0 0 chr3R 4947403 4947437 -22957616 + (T)n Simple_repeat Simple_repeat 1 34 0 4 622 180 0 0 0 chr3R 4949929 4949949 -22955104 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 622 225 200 0 0 chr3R 4951842 4951887 -22953166 + T-rich Low_complexity Low_complexity 1 45 0 4 622 24 32 0 0 chr3R 4957157 4957188 -22947865 + AT_rich Low_complexity Low_complexity 1 31 0 4 622 213 227 0 0 chr3R 4958323 4958367 -22946686 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 622 24 0 0 0 chr3R 4958848 4958872 -22946181 + AT_rich Low_complexity Low_complexity 1 24 0 4 622 24 0 0 0 chr3R 4959878 4959902 -22945151 + AT_rich Low_complexity Low_complexity 1 24 0 4 622 221 135 19 0 chr3R 4962669 4962721 -22942332 + (CAT)n Simple_repeat Simple_repeat 2 54 0 4 622 216 0 0 0 chr3R 4963845 4963869 -22941184 + (A)n Simple_repeat Simple_repeat 1 24 0 4 622 21 0 0 0 chr3R 4965081 4965102 -22939951 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 207 0 0 0 chr3R 4967268 4967291 -22937762 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 622 25 0 0 0 chr3R 4969515 4969540 -22935513 + AT_rich Low_complexity Low_complexity 1 25 0 4 622 429 20 0 0 chr3R 4969891 4969941 -22935112 + (CAA)n Simple_repeat Simple_repeat 1 50 0 4 622 212 184 0 0 chr3R 4970215 4970253 -22934800 + A-rich Low_complexity Low_complexity 1 38 0 4 622 21 0 0 0 chr3R 4971269 4971290 -22933763 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 26 0 0 0 chr3R 4971302 4971328 -22933725 + AT_rich Low_complexity Low_complexity 1 26 0 4 622 183 100 0 0 chr3R 4973851 4973881 -22931172 + (T)n Simple_repeat Simple_repeat 1 30 0 4 622 186 71 0 0 chr3R 4974660 4974688 -22930365 + (A)n Simple_repeat Simple_repeat 1 28 0 4 622 201 108 0 0 chr3R 4975306 4975343 -22929710 + (A)n Simple_repeat Simple_repeat 1 37 0 4 622 228 67 0 0 chr3R 4975729 4975759 -22929294 + (T)n Simple_repeat Simple_repeat 1 30 0 4 622 24 0 0 0 chr3R 4979611 4979635 -22925418 + AT_rich Low_complexity Low_complexity 1 24 0 4 622 219 36 0 0 chr3R 4980378 4980406 -22924647 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 4 623 198 143 0 0 chr3R 4980821 4980856 -22924197 + (GTGTG)n Simple_repeat Simple_repeat 3 37 0 4 623 189 0 0 0 chr3R 4980860 4980881 -22924172 + (GAATG)n Simple_repeat Simple_repeat 2 22 0 4 623 24 0 0 0 chr3R 4982060 4982084 -22922969 + AT_rich Low_complexity Low_complexity 1 24 0 4 623 180 97 0 0 chr3R 4983130 4983161 -22921892 + (T)n Simple_repeat Simple_repeat 1 31 0 4 623 33 0 0 0 chr3R 4984493 4984526 -22920527 + AT_rich Low_complexity Low_complexity 1 33 0 4 623 214 195 0 0 chr3R 4984718 4984759 -22920294 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 623 25 31 0 0 chr3R 4985125 4985157 -22919896 + AT_rich Low_complexity Low_complexity 1 32 0 4 623 25 0 0 0 chr3R 4985791 4985816 -22919237 + AT_rich Low_complexity Low_complexity 1 25 0 4 623 25 51 0 0 chr3R 4987473 4987512 -22917541 + AT_rich Low_complexity Low_complexity 1 39 0 4 623 270 0 0 0 chr3R 4989589 4989619 -22915434 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 623 201 154 51 0 chr3R 4990607 4990646 -22914407 + A-rich Low_complexity Low_complexity 6 46 0 4 623 27 29 0 0 chr3R 4992501 4992535 -22912518 + AT_rich Low_complexity Low_complexity 1 34 0 4 623 384 22 0 0 chr3R 4994319 4994364 -22910689 + (ATG)n Simple_repeat Simple_repeat 3 47 0 4 623 185 108 27 0 chr3R 4995360 4995397 -22909656 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 623 180 0 0 0 chr3R 4995553 4995573 -22909480 + (TACTG)n Simple_repeat Simple_repeat 4 23 0 4 623 26 0 0 0 chr3R 4997616 4997642 -22907411 + AT_rich Low_complexity Low_complexity 1 26 0 4 623 23 33 0 0 chr3R 5004632 5004662 -22900391 + AT_rich Low_complexity Low_complexity 1 30 0 4 623 22 0 0 0 chr3R 5005520 5005542 -22899511 + AT_rich Low_complexity Low_complexity 1 22 0 4 623 195 96 19 37 chr3R 5006308 5006362 -22898691 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 4 623 207 162 0 0 chr3R 5008357 5008394 -22896659 + (ATG)n Simple_repeat Simple_repeat 3 39 0 4 623 26 30 0 0 chr3R 5009574 5009607 -22895446 + AT_rich Low_complexity Low_complexity 1 33 0 4 623 236 254 0 0 chr3R 5010310 5010365 -22894688 + (CATG)n Simple_repeat Simple_repeat 2 56 0 4 623 274 287 0 22 chr3R 5010988 5011077 -22893976 + (TTCCG)n Simple_repeat Simple_repeat 4 90 0 4 623 189 74 0 0 chr3R 5013222 5013249 -22891804 + (T)n Simple_repeat Simple_repeat 1 27 0 4 623 237 65 0 0 chr3R 5013300 5013331 -22891722 + (TTG)n Simple_repeat Simple_repeat 2 32 0 4 623 21 0 0 0 chr3R 5016685 5016706 -22888347 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 23 33 0 0 chr3R 5018252 5018282 -22886771 + AT_rich Low_complexity Low_complexity 1 30 0 4 623 23 0 0 0 chr3R 5018918 5018941 -22886112 + AT_rich Low_complexity Low_complexity 1 23 0 4 623 28 29 0 0 chr3R 5020183 5020218 -22884835 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 28 29 0 0 chr3R 5025010 5025045 -22880008 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 234 160 0 0 chr3R 5027839 5027889 -22877164 + (CTA)n Simple_repeat Simple_repeat 2 51 0 4 623 26 50 0 0 chr3R 5028362 5028402 -22876651 + AT_rich Low_complexity Low_complexity 1 40 0 4 623 225 128 0 0 chr3R 5030448 5030495 -22874558 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 623 261 83 0 0 chr3R 5031948 5031984 -22873069 + (T)n Simple_repeat Simple_repeat 1 36 0 4 623 234 0 0 0 chr3R 5032770 5032796 -22872257 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 623 21 36 0 0 chr3R 5036371 5036399 -22868654 + AT_rich Low_complexity Low_complexity 1 28 0 4 623 21 0 0 0 chr3R 5039631 5039652 -22865401 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 208 217 0 0 chr3R 5039793 5039839 -22865214 + (CCG)n Simple_repeat Simple_repeat 2 47 0 4 623 31 26 0 0 chr3R 5040004 5040042 -22865011 + AT_rich Low_complexity Low_complexity 1 38 0 4 623 225 0 0 0 chr3R 5041641 5041666 -22863387 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 623 24 32 0 0 chr3R 5044536 5044567 -22860486 + AT_rich Low_complexity Low_complexity 1 31 0 4 623 21 57 0 0 chr3R 5047289 5047324 -22857729 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 324 0 0 0 chr3R 5050579 5050615 -22854438 + (A)n Simple_repeat Simple_repeat 1 36 0 4 623 279 0 0 0 chr3R 5055914 5055945 -22849108 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 623 285 98 0 0 chr3R 5058087 5058128 -22846925 + (CTG)n Simple_repeat Simple_repeat 1 41 0 4 623 254 177 0 25 chr3R 5058215 5058296 -22846757 + (CTG)n Simple_repeat Simple_repeat 3 81 0 4 623 204 200 0 0 chr3R 5059444 5059484 -22845569 + (CGG)n Simple_repeat Simple_repeat 1 40 0 4 623 285 151 0 0 chr3R 5059584 5059637 -22845416 + (CTG)n Simple_repeat Simple_repeat 1 53 0 4 623 341 179 0 0 chr3R 5059674 5059752 -22845301 - ROO_I LTR Pao -7527 729 652 4 623 21 0 0 0 chr3R 5059936 5059957 -22845096 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 24 0 0 0 chr3R 5060023 5060047 -22845006 + AT_rich Low_complexity Low_complexity 1 24 0 4 623 24 77 0 0 chr3R 5060131 5060183 -22844870 + AT_rich Low_complexity Low_complexity 1 52 0 4 623 24 0 0 0 chr3R 5061699 5061723 -22843330 + AT_rich Low_complexity Low_complexity 1 24 0 4 623 251 269 0 0 chr3R 5063086 5063153 -22841900 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 623 216 303 0 0 chr3R 5064113 5064202 -22840851 + T-rich Low_complexity Low_complexity 1 89 0 4 623 22 35 0 0 chr3R 5066824 5066853 -22838200 + AT_rich Low_complexity Low_complexity 1 29 0 4 623 23 33 0 0 chr3R 5072290 5072320 -22832733 + AT_rich Low_complexity Low_complexity 1 30 0 4 623 21 0 0 0 chr3R 5077135 5077156 -22827897 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 21 57 0 0 chr3R 5078701 5078736 -22826317 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 33 73 0 0 chr3R 5080475 5080543 -22824510 + AT_rich Low_complexity Low_complexity 1 68 0 4 623 24 53 0 0 chr3R 5086229 5086267 -22818786 + AT_rich Low_complexity Low_complexity 1 38 0 4 623 231 180 0 39 chr3R 5087893 5087945 -22817108 + GA-rich Low_complexity Low_complexity 3 52 0 4 623 25 51 0 0 chr3R 5095920 5095959 -22809094 + AT_rich Low_complexity Low_complexity 1 39 0 4 623 21 57 0 0 chr3R 5098487 5098522 -22806531 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 228 67 0 0 chr3R 5100672 5100702 -22804351 + (CATAC)n Simple_repeat Simple_repeat 4 33 0 4 623 21 36 0 0 chr3R 5104036 5104064 -22800989 + AT_rich Low_complexity Low_complexity 1 28 0 4 623 26 30 0 0 chr3R 5104116 5104149 -22800904 + AT_rich Low_complexity Low_complexity 1 33 0 4 623 48019 2 0 0 chr3R 5104561 5109744 -22795309 - DMRT1A LINE R1 0 5183 1 4 624 21 0 0 0 chr3R 5111878 5111899 -22793154 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 216 97 0 0 chr3R 5111966 5111997 -22793056 + (T)n Simple_repeat Simple_repeat 1 31 0 4 624 243 0 0 0 chr3R 5112281 5112308 -22792745 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 624 293 68 0 22 chr3R 5115612 5115657 -22789396 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 624 201 156 0 0 chr3R 5115899 5115931 -22789122 + (CAT)n Simple_repeat Simple_repeat 3 34 0 4 624 234 0 0 0 chr3R 5118959 5118985 -22786068 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 624 24 32 0 0 chr3R 5119861 5119892 -22785161 + AT_rich Low_complexity Low_complexity 1 31 0 4 624 21 36 0 0 chr3R 5120637 5120665 -22784388 + AT_rich Low_complexity Low_complexity 1 28 0 4 624 21 0 0 0 chr3R 5120678 5120699 -22784354 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 201 132 0 0 chr3R 5124929 5124967 -22780086 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 624 369 109 0 0 chr3R 5126009 5126064 -22778989 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 624 198 103 0 0 chr3R 5126518 5126547 -22778506 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 624 3442 2 0 2 chr3R 5130305 5130708 -22774345 + STALKER4_LTR LTR Gypsy 1 402 0 4 624 289 96 0 37 chr3R 5130712 5130766 -22774287 + STALKER4_I LTR Gypsy 1 52 -7350 4 624 47745 19 10 5 chr3R 5130940 5137128 -22767925 + STALKER4_I LTR Gypsy 242 6530 0 4 624 3442 2 0 2 chr3R 5137128 5137531 -22767522 + STALKER4_LTR LTR Gypsy 1 402 0 4 624 270 229 16 0 chr3R 5137569 5137630 -22767423 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 624 27 0 0 0 chr3R 5138036 5138063 -22766990 + AT_rich Low_complexity Low_complexity 1 27 0 4 624 234 0 0 0 chr3R 5142522 5142548 -22762505 + (CCA)n Simple_repeat Simple_repeat 1 26 0 4 624 226 237 0 0 chr3R 5143761 5143820 -22761233 + T-rich Low_complexity Low_complexity 1 59 0 4 624 255 31 0 0 chr3R 5143942 5143974 -22761079 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 624 2825 6 0 33 chr3R 5145352 5145716 -22759337 + LINEJ1_DM LINE Jockey 4669 5020 0 4 624 21 0 0 0 chr3R 5148046 5148067 -22756986 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 183 80 0 0 chr3R 5149597 5149622 -22755431 + (CAT)n Simple_repeat Simple_repeat 1 25 0 4 624 21 0 0 0 chr3R 5150711 5150732 -22754321 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 333 82 0 0 chr3R 5151136 5151185 -22753868 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 4 624 23 0 0 0 chr3R 5154575 5154598 -22750455 + AT_rich Low_complexity Low_complexity 1 23 0 4 624 30 0 0 0 chr3R 5155759 5155789 -22749264 + AT_rich Low_complexity Low_complexity 1 30 0 4 624 25 0 0 0 chr3R 5166688 5166713 -22738340 + AT_rich Low_complexity Low_complexity 1 25 0 4 624 40 37 0 0 chr3R 5168508 5168562 -22736491 + AT_rich Low_complexity Low_complexity 1 54 0 4 624 264 59 0 0 chr3R 5171923 5171957 -22733096 + (ATG)n Simple_repeat Simple_repeat 1 34 0 4 624 203 175 0 24 chr3R 5173641 5173682 -22731371 + CT-rich Low_complexity Low_complexity 4 43 0 4 624 24 32 0 0 chr3R 5177401 5177432 -22727621 + AT_rich Low_complexity Low_complexity 1 31 0 4 624 267 250 16 0 chr3R 5178923 5178987 -22726066 + CT-rich Low_complexity Low_complexity 2 66 0 4 624 21 57 0 0 chr3R 5179176 5179211 -22725842 + AT_rich Low_complexity Low_complexity 1 35 0 4 624 24 67 0 0 chr3R 5185037 5185082 -22719971 + AT_rich Low_complexity Low_complexity 1 45 0 4 624 212 292 0 45 chr3R 5185093 5185204 -22719849 + A-rich Low_complexity Low_complexity 1 106 0 4 624 22 0 0 0 chr3R 5185366 5185388 -22719665 + AT_rich Low_complexity Low_complexity 1 22 0 4 624 225 157 39 0 chr3R 5185505 5185556 -22719497 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 624 205 182 0 0 chr3R 5185955 5185999 -22719054 + A-rich Low_complexity Low_complexity 1 44 0 4 624 23 0 0 0 chr3R 5186949 5186972 -22718081 + AT_rich Low_complexity Low_complexity 1 23 0 4 624 1720 0 0 0 chr3R 5187590 5187776 -22717277 + POGON1 DNA Pogo 1 186 0 4 624 264 30 0 0 chr3R 5188459 5188492 -22716561 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 624 222 231 0 0 chr3R 5193636 5193688 -22711365 + T-rich Low_complexity Low_complexity 1 52 0 4 624 22 80 0 0 chr3R 5194718 5194768 -22710285 + AT_rich Low_complexity Low_complexity 1 50 0 4 624 201 39 0 0 chr3R 5197266 5197292 -22707761 + (TTA)n Simple_repeat Simple_repeat 1 26 0 4 624 25 0 0 0 chr3R 5200717 5200742 -22704311 + AT_rich Low_complexity Low_complexity 1 25 0 4 624 183 100 0 0 chr3R 5201474 5201504 -22703549 + (T)n Simple_repeat Simple_repeat 1 30 0 4 624 30 59 0 0 chr3R 5203860 5203911 -22701142 + AT_rich Low_complexity Low_complexity 1 51 0 4 624 228 67 0 0 chr3R 5207076 5207106 -22697947 + (AACTG)n Simple_repeat Simple_repeat 1 30 0 4 624 184 73 0 89 chr3R 5215950 5215995 -22689058 + T-rich Low_complexity Low_complexity 2 42 0 4 624 207 0 0 0 chr3R 5218755 5218778 -22686275 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 4 624 186 227 0 0 chr3R 5219825 5219869 -22685184 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 624 22 35 0 0 chr3R 5221584 5221613 -22683440 + AT_rich Low_complexity Low_complexity 1 29 0 4 624 38 0 0 0 chr3R 5225925 5225963 -22679090 + AT_rich Low_complexity Low_complexity 1 38 0 4 624 24 67 0 0 chr3R 5239396 5239441 -22665612 + AT_rich Low_complexity Low_complexity 1 45 0 4 625 38 51 0 0 chr3R 5243122 5243181 -22661872 + AT_rich Low_complexity Low_complexity 1 59 0 4 625 207 69 0 0 chr3R 5243956 5243985 -22661068 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 625 23 0 0 0 chr3R 5244623 5244646 -22660407 + AT_rich Low_complexity Low_complexity 1 23 0 4 625 21 36 0 0 chr3R 5245352 5245380 -22659673 + AT_rich Low_complexity Low_complexity 1 28 0 4 625 209 227 0 0 chr3R 5249697 5249741 -22655312 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 625 225 245 0 0 chr3R 5249847 5249900 -22655153 + (CTG)n Simple_repeat Simple_repeat 3 55 0 4 625 213 94 0 0 chr3R 5250059 5250091 -22654962 + (CTG)n Simple_repeat Simple_repeat 1 32 0 4 625 555 53 0 0 chr3R 5253687 5253762 -22651291 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 625 186 43 0 0 chr3R 5253948 5253971 -22651082 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 625 261 169 0 0 chr3R 5258033 5258092 -22646961 + (CTCG)n Simple_repeat Simple_repeat 4 62 0 4 625 180 0 0 0 chr3R 5258208 5258228 -22646825 + (A)n Simple_repeat Simple_repeat 1 20 0 4 625 261 128 0 0 chr3R 5258246 5258293 -22646760 + (CAATC)n Simple_repeat Simple_repeat 2 48 0 4 625 203 42 0 145 chr3R 5258573 5258656 -22646397 + (CAAAT)n Simple_repeat Simple_repeat 2 72 0 4 625 198 0 0 0 chr3R 5258947 5258969 -22646084 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 625 207 69 0 0 chr3R 5259178 5259207 -22645846 + (CGAA)n Simple_repeat Simple_repeat 1 29 0 4 625 210 154 0 0 chr3R 5259674 5259713 -22645340 + (TCTG)n Simple_repeat Simple_repeat 1 39 0 4 625 210 226 0 0 chr3R 5261279 5261332 -22643721 + (CAG)n Simple_repeat Simple_repeat 3 55 0 4 625 221 224 0 0 chr3R 5261361 5261410 -22643643 + (GCTG)n Simple_repeat Simple_repeat 1 49 0 4 625 208 108 54 0 chr3R 5262435 5262472 -22642581 + (CTCG)n Simple_repeat Simple_repeat 1 39 0 4 625 246 32 0 0 chr3R 5262745 5262776 -22642277 + (CAG)n Simple_repeat Simple_repeat 3 33 0 4 625 180 111 0 0 chr3R 5263655 5263682 -22641371 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 625 220 220 0 0 chr3R 5264739 5264789 -22640264 + T-rich Low_complexity Low_complexity 1 50 0 4 625 414 0 0 0 chr3R 5265755 5265801 -22639252 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 625 262 214 14 14 chr3R 5266719 5266790 -22638263 + (CAG)n Simple_repeat Simple_repeat 3 73 0 4 625 355 204 0 55 chr3R 5266929 5267038 -22638015 + ROO_I LTR Pao 641 743 -7513 4 625 383 194 19 10 chr3R 5267238 5267342 -22637711 + ROO_I LTR Pao 639 743 -7513 4 625 189 0 0 0 chr3R 5267918 5267939 -22637114 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 625 329 62 21 0 chr3R 5268406 5268454 -22636599 + (GAGTG)n Simple_repeat Simple_repeat 4 52 0 4 625 443 74 0 14 chr3R 5273198 5273267 -22631786 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 625 278 286 11 0 chr3R 5274239 5274330 -22630723 + (TA)n Simple_repeat Simple_repeat 2 93 0 4 625 24 0 0 0 chr3R 5275188 5275212 -22629841 + AT_rich Low_complexity Low_complexity 1 24 0 4 625 195 42 0 0 chr3R 5275748 5275772 -22629281 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 4 625 183 129 0 0 chr3R 5275855 5275886 -22629167 + (CAGT)n Simple_repeat Simple_repeat 4 34 0 4 625 336 188 0 0 chr3R 5276551 5276620 -22628433 + (CAAT)n Simple_repeat Simple_repeat 1 69 0 4 625 255 140 0 0 chr3R 5276745 5276795 -22628258 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 625 24 32 0 0 chr3R 5277086 5277117 -22627936 + AT_rich Low_complexity Low_complexity 1 31 0 4 625 219 219 23 58 chr3R 5278429 5278516 -22626537 + (CATATA)n Simple_repeat Simple_repeat 4 87 0 4 625 26 0 0 0 chr3R 5278778 5278804 -22626249 + AT_rich Low_complexity Low_complexity 1 26 0 4 625 22 0 0 0 chr3R 5280136 5280158 -22624895 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 22 0 0 0 chr3R 5281191 5281213 -22623840 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 198 0 0 0 chr3R 5283144 5283166 -22621887 + (CATA)n Simple_repeat Simple_repeat 2 23 0 4 625 204 40 0 0 chr3R 5286914 5286939 -22618114 + (TATG)n Simple_repeat Simple_repeat 1 25 0 4 625 336 64 0 0 chr3R 5288412 5288459 -22616594 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 625 429 70 0 0 chr3R 5289054 5289111 -22615942 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 625 24 0 0 0 chr3R 5289810 5289834 -22615219 + AT_rich Low_complexity Low_complexity 1 24 0 4 625 285 118 0 0 chr3R 5293208 5293259 -22611794 + (ATTTG)n Simple_repeat Simple_repeat 4 54 0 4 625 226 198 0 102 chr3R 5293949 5294067 -22610986 - ROO_I LTR Pao -7513 743 638 4 625 324 0 0 0 chr3R 5294293 5294329 -22610724 + (CTG)n Simple_repeat Simple_repeat 3 38 0 4 625 354 222 0 0 chr3R 5295606 5295705 -22609348 - ROO_I LTR Pao -7522 734 636 4 625 322 176 0 34 chr3R 5300630 5300718 -22604335 - ROO_I LTR Pao -7531 725 641 4 625 314 233 0 40 chr3R 5300890 5300966 -22604087 - ROO_I LTR Pao -7515 741 669 4 625 345 125 0 0 chr3R 5301380 5301436 -22603617 + (CTG)n Simple_repeat Simple_repeat 3 58 0 4 625 255 164 0 0 chr3R 5304173 5304234 -22600819 + T-rich Low_complexity Low_complexity 1 61 0 4 625 314 108 0 15 chr3R 5304309 5304375 -22600678 + (TTG)n Simple_repeat Simple_repeat 3 67 0 4 625 189 107 0 0 chr3R 5304373 5304401 -22600652 + (TGG)n Simple_repeat Simple_repeat 3 30 0 4 625 348 64 0 0 chr3R 5304831 5304878 -22600175 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 4 625 22 70 0 0 chr3R 5305463 5305506 -22599547 + AT_rich Low_complexity Low_complexity 1 43 0 4 625 29 0 0 0 chr3R 5306353 5306382 -22598671 + AT_rich Low_complexity Low_complexity 1 29 0 4 625 180 0 0 0 chr3R 5310640 5310660 -22594393 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4 625 180 0 0 0 chr3R 5310788 5310808 -22594245 + (T)n Simple_repeat Simple_repeat 1 20 0 4 625 27 81 0 0 chr3R 5311065 5311127 -22593926 + AT_rich Low_complexity Low_complexity 1 62 0 4 625 233 128 0 21 chr3R 5311542 5311590 -22593463 + (TTA)n Simple_repeat Simple_repeat 2 48 0 4 625 213 108 0 0 chr3R 5311686 5311723 -22593330 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 625 22 0 0 0 chr3R 5311905 5311927 -22593126 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 23 0 0 0 chr3R 5312098 5312121 -22592932 + AT_rich Low_complexity Low_complexity 1 23 0 4 625 234 265 0 0 chr3R 5312606 5312674 -22592379 + T-rich Low_complexity Low_complexity 1 68 0 4 625 241 244 0 65 chr3R 5314186 5314278 -22590775 + (CAA)n Simple_repeat Simple_repeat 3 88 0 4 625 234 0 0 0 chr3R 5314438 5314464 -22590589 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 625 309 51 0 0 chr3R 5315368 5315407 -22589646 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 625 27 0 0 0 chr3R 5317647 5317674 -22587379 + AT_rich Low_complexity Low_complexity 1 27 0 4 625 198 0 0 0 chr3R 5317820 5317842 -22587211 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 625 209 314 0 0 chr3R 5318062 5318132 -22586921 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 625 222 150 0 0 chr3R 5318357 5318397 -22586656 + (TTG)n Simple_repeat Simple_repeat 2 41 0 4 625 213 39 0 0 chr3R 5318700 5318726 -22586327 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 625 21 0 0 0 chr3R 5322875 5322896 -22582157 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 21 0 0 0 chr3R 5325200 5325221 -22579832 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 22 0 0 0 chr3R 5330235 5330257 -22574796 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 180 0 0 0 chr3R 5334344 5334364 -22570689 + (T)n Simple_repeat Simple_repeat 1 20 0 4 625 203 0 37 0 chr3R 5334629 5334656 -22570397 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 625 24 0 0 0 chr3R 5334736 5334760 -22570293 + AT_rich Low_complexity Low_complexity 1 24 0 4 625 268 318 0 0 chr3R 5335209 5335294 -22569759 + (CCA)n Simple_repeat Simple_repeat 2 86 0 4 625 24 32 0 0 chr3R 5336326 5336357 -22568696 + AT_rich Low_complexity Low_complexity 1 31 0 4 625 22 56 0 0 chr3R 5338186 5338222 -22566831 + AT_rich Low_complexity Low_complexity 1 36 0 4 625 282 104 14 56 chr3R 5348474 5348545 -22556508 + (CAA)n Simple_repeat Simple_repeat 3 70 0 4 625 33 43 0 0 chr3R 5348905 5348952 -22556101 + AT_rich Low_complexity Low_complexity 1 47 0 4 625 215 307 0 13 chr3R 5349392 5349468 -22555585 + (CAG)n Simple_repeat Simple_repeat 2 76 0 4 625 201 238 0 0 chr3R 5355769 5355811 -22549242 + (TATG)n Simple_repeat Simple_repeat 4 45 0 4 625 21 82 0 0 chr3R 5361730 5361779 -22543274 + AT_rich Low_complexity Low_complexity 1 49 0 4 625 195 152 0 0 chr3R 5361804 5361850 -22543203 + T-rich Low_complexity Low_complexity 1 46 0 4 625 210 71 0 0 chr3R 5363563 5363591 -22541462 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 625 21 0 0 0 chr3R 5365317 5365338 -22539715 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 227 246 0 0 chr3R 5366764 5366829 -22538224 + (CTG)n Simple_repeat Simple_repeat 3 67 0 4 625 230 227 15 15 chr3R 5369032 5369099 -22535954 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 625 203 167 0 0 chr3R 5371444 5371480 -22533573 + GA-rich Low_complexity Low_complexity 2 37 0 4 625 333 237 0 31 chr3R 5372538 5372634 -22532419 - ROO_I LTR Pao -7518 738 646 4 625 248 192 0 27 chr3R 5372680 5372755 -22532298 - ROO_I LTR Pao -7537 719 647 4 625 273 148 18 73 chr3R 5372908 5373017 -22532036 - ROO_I LTR Pao -7513 743 641 4 625 241 309 0 0 chr3R 5373707 5373791 -22531262 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 626 200 289 22 11 chr3R 5373974 5374065 -22530988 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 4 626 512 232 23 23 chr3R 5374277 5374405 -22530648 - MARINA DNA Mariner -101 1166 1039 4 626 25 0 0 0 chr3R 5374982 5375007 -22530046 + AT_rich Low_complexity Low_complexity 1 25 0 4 626 191 160 0 39 chr3R 5375050 5375102 -22529951 + (TTGG)n Simple_repeat Simple_repeat 3 52 0 4 626 220 27 54 0 chr3R 5375949 5375986 -22529067 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 4 626 24 32 0 0 chr3R 5376438 5376469 -22528584 + AT_rich Low_complexity Low_complexity 1 31 0 4 626 24 53 0 0 chr3R 5377610 5377648 -22527405 + AT_rich Low_complexity Low_complexity 1 38 0 4 626 24 0 0 0 chr3R 5381409 5381433 -22523620 + AT_rich Low_complexity Low_complexity 1 24 0 4 626 196 191 0 45 chr3R 5385666 5385732 -22519321 + (CAA)n Simple_repeat Simple_repeat 1 63 0 4 626 205 197 33 0 chr3R 5385880 5385941 -22519112 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 626 243 292 0 19 chr3R 5386216 5386324 -22518729 + (CAG)n Simple_repeat Simple_repeat 3 108 0 4 626 23 33 0 0 chr3R 5395860 5395890 -22509163 + AT_rich Low_complexity Low_complexity 1 30 0 4 626 29 90 0 0 chr3R 5396033 5396111 -22508942 + AT_rich Low_complexity Low_complexity 1 78 0 4 626 22 56 0 0 chr3R 5399796 5399832 -22505221 + AT_rich Low_complexity Low_complexity 1 36 0 4 626 222 207 0 0 chr3R 5404282 5404340 -22500713 + GA-rich Low_complexity Low_complexity 2 59 0 4 626 24 32 0 0 chr3R 5406903 5406934 -22498119 + AT_rich Low_complexity Low_complexity 1 31 0 4 626 25 31 0 0 chr3R 5408398 5408430 -22496623 + AT_rich Low_complexity Low_complexity 1 32 0 4 626 261 145 0 0 chr3R 5409475 5409537 -22495516 + (GGA)n Simple_repeat Simple_repeat 2 63 0 4 626 24 32 0 0 chr3R 5413479 5413510 -22491543 + AT_rich Low_complexity Low_complexity 1 31 0 4 626 192 125 0 0 chr3R 5417444 5417476 -22487577 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 626 198 118 0 0 chr3R 5418884 5418918 -22486135 + (CGAAT)n Simple_repeat Simple_repeat 5 38 0 4 626 188 34 0 33 chr3R 5419176 5419206 -22485847 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 626 210 245 0 0 chr3R 5419575 5419628 -22485425 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 4 626 209 259 0 0 chr3R 5420542 5420600 -22484453 + (TTCGG)n Simple_repeat Simple_repeat 4 61 0 4 626 23 0 0 0 chr3R 5423325 5423348 -22481705 + AT_rich Low_complexity Low_complexity 1 23 0 4 626 21 0 0 0 chr3R 5426064 5426085 -22478968 + AT_rich Low_complexity Low_complexity 1 21 0 4 626 228 180 0 20 chr3R 5427600 5427651 -22477402 + T-rich Low_complexity Low_complexity 4 53 0 4 626 180 182 0 0 chr3R 5428021 5428065 -22476988 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 626 22 35 0 0 chr3R 5432038 5432067 -22472986 + AT_rich Low_complexity Low_complexity 1 29 0 4 626 209 206 21 35 chr3R 5432790 5432883 -22472170 + A-rich Low_complexity Low_complexity 1 91 0 4 626 204 40 0 0 chr3R 5435883 5435908 -22469145 + (A)n Simple_repeat Simple_repeat 1 25 0 4 626 238 161 141 31 chr3R 5438091 5438155 -22466898 + DNAREP1_DM LINE Penelope 1 71 -523 4 626 411 170 102 41 chr3R 5438200 5438298 -22466755 + DNAREP1_DM LINE Penelope 490 593 -1 4 626 201 39 0 0 chr3R 5438796 5438822 -22466231 + (TAAAAA)n Simple_repeat Simple_repeat 4 29 0 4 626 197 83 0 27 chr3R 5440741 5440778 -22464275 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 626 246 62 0 0 chr3R 5441921 5441953 -22463100 + (TTG)n Simple_repeat Simple_repeat 1 32 0 4 626 210 71 0 0 chr3R 5442786 5442814 -22462239 + (A)n Simple_repeat Simple_repeat 1 28 0 4 626 232 174 0 0 chr3R 5443808 5443854 -22461199 + A-rich Low_complexity Low_complexity 1 46 0 4 626 25 0 0 0 chr3R 5444842 5444867 -22460186 + AT_rich Low_complexity Low_complexity 1 25 0 4 626 24 0 0 0 chr3R 5445420 5445444 -22459609 + AT_rich Low_complexity Low_complexity 1 24 0 4 626 204 135 0 0 chr3R 5447447 5447484 -22457569 + (CAG)n Simple_repeat Simple_repeat 2 38 0 4 626 270 323 0 0 chr3R 5454825 5454955 -22450098 + CT-rich Low_complexity Low_complexity 3 132 0 4 626 201 74 0 0 chr3R 5456011 5456038 -22449015 + (TTC)n Simple_repeat Simple_repeat 1 27 0 4 626 40 0 0 0 chr3R 5456803 5456843 -22448210 + AT_rich Low_complexity Low_complexity 1 40 0 4 626 21 36 0 0 chr3R 5465020 5465048 -22440005 + AT_rich Low_complexity Low_complexity 1 28 0 4 626 189 132 0 0 chr3R 5474756 5474794 -22430259 + (GGA)n Simple_repeat Simple_repeat 2 39 0 4 626 222 128 0 0 chr3R 5474850 5474889 -22430164 + (GGGAGA)n Simple_repeat Simple_repeat 2 40 0 4 626 244 239 43 0 chr3R 5475473 5475565 -22429488 + (CATATA)n Simple_repeat Simple_repeat 2 97 0 4 626 23 78 0 0 chr3R 5476599 5476650 -22428403 + AT_rich Low_complexity Low_complexity 1 51 0 4 626 22 35 0 0 chr3R 5481255 5481284 -22423769 + AT_rich Low_complexity Low_complexity 1 29 0 4 626 228 241 83 12 chr3R 5487311 5487395 -22417658 + R1_DM LINE R1 1145 1234 -4122 4 626 192 97 0 0 chr3R 5488833 5488864 -22416189 + (GGA)n Simple_repeat Simple_repeat 3 33 0 4 627 36 23 0 0 chr3R 5512827 5512870 -22392183 + AT_rich Low_complexity Low_complexity 1 43 0 4 627 198 128 0 0 chr3R 5514188 5514227 -22390826 + (ATCTG)n Simple_repeat Simple_repeat 2 40 0 4 627 36 23 0 0 chr3R 5520147 5520190 -22384863 + AT_rich Low_complexity Low_complexity 1 43 0 4 627 198 128 0 0 chr3R 5522074 5522113 -22382940 + (ATCTG)n Simple_repeat Simple_repeat 2 40 0 4 627 262 29 57 0 chr3R 5525747 5525782 -22379271 + PROTOP_B DNA P 506 542 -611 4 627 237 273 0 0 chr3R 5526274 5526329 -22378724 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 627 198 0 0 0 chr3R 5530593 5530615 -22374438 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 627 192 163 0 0 chr3R 5531622 5531665 -22373388 + (TAA)n Simple_repeat Simple_repeat 1 43 0 4 627 22 56 0 0 chr3R 5531752 5531788 -22373265 + AT_rich Low_complexity Low_complexity 1 36 0 4 627 205 196 0 51 chr3R 5536040 5536099 -22368954 + (TATG)n Simple_repeat Simple_repeat 1 56 0 4 627 23 33 0 0 chr3R 5540356 5540386 -22364667 + AT_rich Low_complexity Low_complexity 1 30 0 4 627 22 0 0 0 chr3R 5549001 5549023 -22356030 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 21 0 0 0 chr3R 5551491 5551512 -22353541 + AT_rich Low_complexity Low_complexity 1 21 0 4 627 183 184 0 0 chr3R 5552914 5552952 -22352101 + (CAGA)n Simple_repeat Simple_repeat 1 38 0 4 627 37 23 0 0 chr3R 5553814 5553858 -22351195 + AT_rich Low_complexity Low_complexity 1 44 0 4 627 605 222 0 6 chr3R 5555726 5555898 -22349155 + (CGGA)n Simple_repeat Simple_repeat 4 174 0 4 627 27 62 0 0 chr3R 5559716 5559764 -22345289 + AT_rich Low_complexity Low_complexity 1 48 0 4 627 22 0 0 0 chr3R 5561996 5562018 -22343035 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 210 150 0 0 chr3R 5564753 5564793 -22340260 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 627 21 0 0 0 chr3R 5565590 5565611 -22339442 + AT_rich Low_complexity Low_complexity 1 21 0 4 627 21 36 0 0 chr3R 5579503 5579531 -22325522 + AT_rich Low_complexity Low_complexity 1 28 0 4 627 25 0 0 0 chr3R 5585245 5585270 -22319783 + AT_rich Low_complexity Low_complexity 1 25 0 4 627 636 14 0 0 chr3R 5587602 5587675 -22317378 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 627 22 0 0 0 chr3R 5597566 5597588 -22307465 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 243 157 0 0 chr3R 5606188 5606239 -22298814 + (CAA)n Simple_repeat Simple_repeat 1 51 0 4 627 182 37 37 0 chr3R 5610831 5610858 -22294195 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 627 210 91 0 0 chr3R 5612456 5612489 -22292564 + (GAA)n Simple_repeat Simple_repeat 2 34 0 4 627 237 94 36 36 chr3R 5612744 5612799 -22292254 + (CACAC)n Simple_repeat Simple_repeat 5 59 0 4 627 202 135 0 26 chr3R 5613802 5613840 -22291213 + (TATG)n Simple_repeat Simple_repeat 2 38 0 4 627 242 194 16 16 chr3R 5614644 5614707 -22290346 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 627 22 0 0 0 chr3R 5614796 5614818 -22290235 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 24 0 0 0 chr3R 5615009 5615033 -22290020 + AT_rich Low_complexity Low_complexity 1 24 0 4 627 23 97 0 0 chr3R 5620593 5620665 -22284388 + AT_rich Low_complexity Low_complexity 1 72 0 4 627 22 0 0 0 chr3R 5623261 5623283 -22281770 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 29 28 0 0 chr3R 5626877 5626913 -22278140 + AT_rich Low_complexity Low_complexity 1 36 0 4 627 279 0 0 0 chr3R 5629878 5629909 -22275144 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 627 44 0 0 0 chr3R 5630747 5630791 -22274262 + AT_rich Low_complexity Low_complexity 1 44 0 4 627 249 247 0 0 chr3R 5633606 5633683 -22271370 + GA-rich Low_complexity Low_complexity 1 77 0 4 627 210 310 10 0 chr3R 5634099 5634199 -22270854 + (CTG)n Simple_repeat Simple_repeat 3 103 0 4 628 192 135 0 0 chr3R 5637042 5637079 -22267974 + (CCA)n Simple_repeat Simple_repeat 2 38 0 4 628 22 56 0 0 chr3R 5643811 5643847 -22261206 + AT_rich Low_complexity Low_complexity 1 36 0 4 628 317 62 21 0 chr3R 5647264 5647312 -22257741 + (TTGG)n Simple_repeat Simple_repeat 2 50 0 4 628 23 54 0 0 chr3R 5648030 5648067 -22256986 + AT_rich Low_complexity Low_complexity 1 37 0 4 628 198 71 0 0 chr3R 5651521 5651549 -22253504 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 4 628 228 135 0 0 chr3R 5652084 5652121 -22252932 + (TAA)n Simple_repeat Simple_repeat 3 39 0 4 628 198 91 0 0 chr3R 5652874 5652907 -22252146 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 628 183 42 0 0 chr3R 5653577 5653601 -22251452 + (T)n Simple_repeat Simple_repeat 1 24 0 4 628 221 270 16 0 chr3R 5653920 5653983 -22251070 + (CATATA)n Simple_repeat Simple_repeat 6 69 0 4 628 180 0 0 0 chr3R 5658822 5658842 -22246211 + (A)n Simple_repeat Simple_repeat 1 20 0 4 628 22 56 0 0 chr3R 5660166 5660202 -22244851 + AT_rich Low_complexity Low_complexity 1 36 0 4 628 183 80 0 0 chr3R 5661250 5661275 -22243778 + (CTG)n Simple_repeat Simple_repeat 1 25 0 4 628 22 0 0 0 chr3R 5661295 5661317 -22243736 + AT_rich Low_complexity Low_complexity 1 22 0 4 628 249 33 0 0 chr3R 5661686 5661716 -22243337 + (CCA)n Simple_repeat Simple_repeat 3 32 0 4 628 213 195 0 0 chr3R 5663222 5663263 -22241790 + (CATCC)n Simple_repeat Simple_repeat 3 43 0 4 628 423 100 0 0 chr3R 5663900 5663970 -22241083 + (TAA)n Simple_repeat Simple_repeat 3 72 0 4 628 3149 20 0 0 chr3R 5663970 5664326 -22240727 + MDG1_LTR LTR Gypsy 87 442 0 4 628 42494 5 14 5 chr3R 5664326 5670807 -22234246 + MDG1_I LTR Gypsy 1 6596 0 4 628 423 100 0 0 chr3R 5670823 5670893 -22234160 + (TAA)n Simple_repeat Simple_repeat 3 72 0 4 628 3161 20 0 0 chr3R 5670893 5671249 -22233804 + MDG1_LTR LTR Gypsy 87 442 0 4 628 188 67 33 0 chr3R 5671265 5671295 -22233758 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 628 2239 19 7 11 chr3R 5671295 5671567 -22233486 - BLASTOPIA_LTR LTR Gypsy -4 271 1 4 628 41589 1 1 0 chr3R 5671567 5676044 -22229009 - BLASTOPIA_I LTR Gypsy 0 4481 1 4 628 2238 19 7 11 chr3R 5676044 5676316 -22228737 - BLASTOPIA_LTR LTR Gypsy 0 275 5 4 628 236 77 26 0 chr3R 5676316 5676355 -22228698 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 628 228 86 0 0 chr3R 5676819 5676854 -22228199 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 628 294 73 0 0 chr3R 5677251 5677292 -22227761 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 628 335 153 42 0 chr3R 5677759 5677831 -22227222 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 4 628 23 0 0 0 chr3R 5678550 5678573 -22226480 + AT_rich Low_complexity Low_complexity 1 23 0 4 628 268 83 42 0 chr3R 5678755 5678803 -22226250 + (GATTG)n Simple_repeat Simple_repeat 2 51 0 4 628 224 314 0 0 chr3R 5679519 5679589 -22225464 + (CAGT)n Simple_repeat Simple_repeat 2 71 0 4 628 189 0 0 0 chr3R 5683024 5683045 -22222008 + (TCC)n Simple_repeat Simple_repeat 3 23 0 4 628 25 0 0 0 chr3R 5683139 5683164 -22221889 + AT_rich Low_complexity Low_complexity 1 25 0 4 628 24 67 0 0 chr3R 5683654 5683699 -22221354 + AT_rich Low_complexity Low_complexity 1 45 0 4 628 216 0 0 0 chr3R 5687351 5687375 -22217678 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 628 30 0 0 0 chr3R 5689341 5689371 -22215682 + AT_rich Low_complexity Low_complexity 1 30 0 4 628 201 143 0 0 chr3R 5689739 5689774 -22215279 + (GGAGAA)n Simple_repeat Simple_repeat 6 40 0 4 628 198 0 0 0 chr3R 5690303 5690325 -22214728 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 628 22 0 0 0 chr3R 5690528 5690550 -22214503 + AT_rich Low_complexity Low_complexity 1 22 0 4 628 410 120 0 13 chr3R 5691483 5691559 -22213494 + (CTG)n Simple_repeat Simple_repeat 2 76 0 4 628 207 211 0 17 chr3R 5691806 5691864 -22213189 + GA-rich Low_complexity Low_complexity 2 58 0 4 628 219 189 0 0 chr3R 5691901 5691954 -22213099 + GA-rich Low_complexity Low_complexity 2 54 0 4 628 29 0 0 0 chr3R 5692609 5692638 -22212415 + AT_rich Low_complexity Low_complexity 1 29 0 4 628 198 171 0 0 chr3R 5693323 5693364 -22211689 + A-rich Low_complexity Low_complexity 1 41 0 4 628 236 192 0 19 chr3R 5694044 5694097 -22210956 + GA-rich Low_complexity Low_complexity 2 53 0 4 628 32 43 0 0 chr3R 5694189 5694235 -22210818 + AT_rich Low_complexity Low_complexity 1 46 0 4 628 239 122 122 0 chr3R 5695041 5695082 -22209971 - DNAREP1_DM LINE Penelope -108 486 441 4 628 325 276 0 116 chr3R 5695073 5695237 -22209816 - DNAREP1_DM LINE Penelope -392 202 58 4 628 200 43 64 21 chr3R 5695304 5695351 -22209702 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 628 210 162 0 0 chr3R 5696749 5696786 -22208267 + A-rich Low_complexity Low_complexity 1 37 0 4 628 189 0 0 0 chr3R 5700333 5700354 -22204699 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 628 236 140 40 0 chr3R 5700682 5700732 -22204321 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 628 258 167 0 0 chr3R 5702147 5702207 -22202846 + (CAT)n Simple_repeat Simple_repeat 3 62 0 4 628 264 120 0 0 chr3R 5709192 5709242 -22195811 + (TTCA)n Simple_repeat Simple_repeat 2 51 0 4 628 186 103 0 0 chr3R 5709279 5709308 -22195745 + (A)n Simple_repeat Simple_repeat 1 29 0 4 628 192 125 0 0 chr3R 5711684 5711716 -22193337 + (T)n Simple_repeat Simple_repeat 1 32 0 4 628 326 129 0 16 chr3R 5715046 5715109 -22189944 + (CAG)n Simple_repeat Simple_repeat 1 62 0 4 628 197 159 23 0 chr3R 5716813 5716857 -22188196 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 628 21 0 0 0 chr3R 5717568 5717589 -22187464 + AT_rich Low_complexity Low_complexity 1 21 0 4 628 25 0 0 0 chr3R 5719116 5719141 -22185912 + AT_rich Low_complexity Low_complexity 1 25 0 4 628 25 31 0 0 chr3R 5719225 5719257 -22185796 + AT_rich Low_complexity Low_complexity 1 32 0 4 628 238 178 0 0 chr3R 5719497 5719542 -22185511 + (CCCA)n Simple_repeat Simple_repeat 2 46 0 4 628 189 0 0 0 chr3R 5719912 5719933 -22185120 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 628 201 154 0 0 chr3R 5721737 5721776 -22183277 + A-rich Low_complexity Low_complexity 1 39 0 4 628 26 30 0 0 chr3R 5723597 5723630 -22181423 + AT_rich Low_complexity Low_complexity 1 33 0 4 628 213 108 0 0 chr3R 5724206 5724243 -22180810 + (T)n Simple_repeat Simple_repeat 1 37 0 4 628 189 0 0 0 chr3R 5726863 5726884 -22178169 + (A)n Simple_repeat Simple_repeat 1 21 0 4 628 242 260 0 0 chr3R 5727422 5727472 -22177581 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 628 243 103 0 0 chr3R 5728325 5728364 -22176689 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 628 249 163 0 0 chr3R 5731264 5731313 -22173740 + A-rich Low_complexity Low_complexity 1 49 0 4 628 186 150 0 0 chr3R 5731720 5731760 -22173293 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 628 270 0 0 0 chr3R 5732020 5732050 -22173003 + (CGGT)n Simple_repeat Simple_repeat 1 30 0 4 628 202 279 0 14 chr3R 5732995 5733064 -22171989 + (CAA)n Simple_repeat Simple_repeat 1 68 0 4 628 23 0 0 0 chr3R 5735587 5735610 -22169443 + AT_rich Low_complexity Low_complexity 1 23 0 4 628 274 298 0 0 chr3R 5736979 5737073 -22167980 + (TTG)n Simple_repeat Simple_repeat 1 94 0 4 628 183 156 0 0 chr3R 5742023 5742055 -22162998 + T-rich Low_complexity Low_complexity 1 32 0 4 628 237 33 0 0 chr3R 5743311 5743341 -22161712 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 4 628 345 82 0 0 chr3R 5747339 5747388 -22157665 + (CACTC)n Simple_repeat Simple_repeat 4 52 0 4 628 228 67 0 0 chr3R 5747395 5747425 -22157628 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 4 628 189 0 0 0 chr3R 5749468 5749489 -22155564 + (T)n Simple_repeat Simple_repeat 1 21 0 4 628 26 30 0 0 chr3R 5751798 5751831 -22153222 + AT_rich Low_complexity Low_complexity 1 33 0 4 628 225 0 0 0 chr3R 5752615 5752640 -22152413 + (A)n Simple_repeat Simple_repeat 1 25 0 4 628 186 118 0 0 chr3R 5757400 5757434 -22147619 + (TAA)n Simple_repeat Simple_repeat 3 36 0 4 628 252 170 0 0 chr3R 5758181 5758234 -22146819 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 628 21 0 0 0 chr3R 5758540 5758561 -22146492 + AT_rich Low_complexity Low_complexity 1 21 0 4 628 215 232 0 0 chr3R 5758788 5758844 -22146209 + A-rich Low_complexity Low_complexity 1 56 0 4 628 263 209 15 15 chr3R 5759108 5759176 -22145877 + (TTG)n Simple_repeat Simple_repeat 1 68 0 4 628 22 0 0 0 chr3R 5759381 5759403 -22145650 + AT_rich Low_complexity Low_complexity 1 22 0 4 628 207 114 0 0 chr3R 5759885 5759920 -22145133 + (T)n Simple_repeat Simple_repeat 1 35 0 4 628 189 0 0 0 chr3R 5759975 5759996 -22145057 + (CTG)n Simple_repeat Simple_repeat 1 21 0 4 628 216 97 0 0 chr3R 5760426 5760457 -22144596 + (CATAC)n Simple_repeat Simple_repeat 3 33 0 4 628 212 100 25 0 chr3R 5761427 5761467 -22143586 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 628 237 234 0 0 chr3R 5764120 5764184 -22140869 + (CAACT)n Simple_repeat Simple_repeat 4 67 0 4 628 26 0 0 0 chr3R 5765802 5765828 -22139225 + AT_rich Low_complexity Low_complexity 1 26 0 4 628 267 54 0 0 chr3R 5766958 5766995 -22138058 + (T)n Simple_repeat Simple_repeat 1 37 0 4 629 23 0 0 0 chr3R 5769140 5769163 -22135890 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 206 81 27 0 chr3R 5769983 5770020 -22135033 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 629 305 94 0 36 chr3R 5770889 5770944 -22134109 + (TAAAAA)n Simple_repeat Simple_repeat 2 54 0 4 629 324 127 0 0 chr3R 5771174 5771229 -22133824 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 4 629 213 170 0 54 chr3R 5772550 5772606 -22132447 + G-rich Low_complexity Low_complexity 2 54 0 4 629 28 0 0 0 chr3R 5772806 5772834 -22132219 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 207 0 0 0 chr3R 5772846 5772869 -22132184 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 629 189 107 0 0 chr3R 5774509 5774537 -22130516 + (CGAAA)n Simple_repeat Simple_repeat 5 32 0 4 629 213 39 0 0 chr3R 5775599 5775625 -22129428 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 629 189 107 0 0 chr3R 5775767 5775795 -22129258 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 629 201 152 0 0 chr3R 5778528 5778561 -22126492 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 629 387 56 0 0 chr3R 5778618 5778672 -22126381 + (TTTCC)n Simple_repeat Simple_repeat 4 57 0 4 629 270 0 0 0 chr3R 5778774 5778804 -22126249 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 629 22 35 0 0 chr3R 5780383 5780412 -22124641 + AT_rich Low_complexity Low_complexity 1 29 0 4 629 237 33 0 0 chr3R 5782226 5782256 -22122797 + (A)n Simple_repeat Simple_repeat 1 30 0 4 629 26 30 0 0 chr3R 5782415 5782448 -22122605 + AT_rich Low_complexity Low_complexity 1 33 0 4 629 183 80 0 0 chr3R 5783573 5783598 -22121455 + (CTG)n Simple_repeat Simple_repeat 2 26 0 4 629 270 56 0 0 chr3R 5784377 5784413 -22120640 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 629 333 125 0 0 chr3R 5785969 5786025 -22119028 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 629 252 167 0 0 chr3R 5786861 5786909 -22118144 + (CTG)n Simple_repeat Simple_repeat 3 50 0 4 629 192 250 0 0 chr3R 5787244 5787308 -22117745 + (CGGA)n Simple_repeat Simple_repeat 1 64 0 4 629 28 29 0 0 chr3R 5789075 5789110 -22115943 + AT_rich Low_complexity Low_complexity 1 35 0 4 629 231 235 0 0 chr3R 5789257 5789308 -22115745 + T-rich Low_complexity Low_complexity 1 51 0 4 629 219 88 0 0 chr3R 5789474 5789508 -22115545 + (GGA)n Simple_repeat Simple_repeat 1 34 0 4 629 205 156 0 0 chr3R 5789656 5789688 -22115365 + (TCG)n Simple_repeat Simple_repeat 2 33 0 4 629 180 182 0 0 chr3R 5790437 5790481 -22114572 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 4 629 219 139 0 0 chr3R 5792582 5792618 -22112435 + (CCGAA)n Simple_repeat Simple_repeat 4 39 0 4 629 219 36 0 0 chr3R 5793542 5793570 -22111483 + (T)n Simple_repeat Simple_repeat 1 28 0 4 629 23 33 0 0 chr3R 5794799 5794829 -22110224 + AT_rich Low_complexity Low_complexity 1 30 0 4 629 191 136 0 43 chr3R 5795330 5795376 -22109677 + (TATAG)n Simple_repeat Simple_repeat 2 45 0 4 629 200 270 13 26 chr3R 5795376 5795452 -22109601 + A-rich Low_complexity Low_complexity 5 79 0 4 629 21 36 0 0 chr3R 5797929 5797957 -22107096 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 201 74 0 0 chr3R 5802894 5802921 -22102132 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 629 288 0 0 0 chr3R 5805278 5805310 -22099743 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 629 189 74 0 0 chr3R 5807579 5807606 -22097447 + (CAGC)n Simple_repeat Simple_repeat 1 27 0 4 629 24 0 0 0 chr3R 5807908 5807932 -22097121 + AT_rich Low_complexity Low_complexity 1 24 0 4 629 198 0 0 0 chr3R 5808593 5808615 -22096438 + (TA)n Simple_repeat Simple_repeat 1 22 0 4 629 222 176 0 0 chr3R 5811497 5811548 -22093505 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 629 292 196 19 76 chr3R 5812971 5813076 -22091977 + ROO_I LTR Pao 640 738 -7518 4 629 254 163 11 11 chr3R 5813086 5813173 -22091880 + ROO_I LTR Pao 643 729 -7527 4 629 221 256 7 74 chr3R 5813215 5813350 -22091703 + (CAG)n Simple_repeat Simple_repeat 3 128 0 4 629 239 238 0 36 chr3R 5813567 5813650 -22091403 + ROO_I LTR Pao 646 725 -7531 4 629 219 289 0 0 chr3R 5813944 5814048 -22091005 + GA-rich Low_complexity Low_complexity 1 104 0 4 629 270 56 0 0 chr3R 5814395 5814431 -22090622 + (TTA)n Simple_repeat Simple_repeat 2 37 0 4 629 198 0 0 0 chr3R 5814442 5814464 -22090589 + (CATATA)n Simple_repeat Simple_repeat 2 23 0 4 629 216 257 14 28 chr3R 5814735 5814792 -22090261 + A-rich Low_complexity Low_complexity 3 60 0 4 629 180 0 0 0 chr3R 5814792 5814812 -22090241 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 629 216 257 14 28 chr3R 5814812 5814826 -22090227 + A-rich Low_complexity Low_complexity 61 73 0 4 629 323 154 0 15 chr3R 5815343 5815409 -22089644 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 4 629 215 31 31 0 chr3R 5816239 5816271 -22088782 + (CAA)n Simple_repeat Simple_repeat 2 34 0 4 629 25 51 0 0 chr3R 5816921 5816960 -22088093 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 206 182 15 0 chr3R 5817982 5818048 -22087005 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 629 183 129 0 0 chr3R 5818502 5818533 -22086520 + (A)n Simple_repeat Simple_repeat 1 31 0 4 629 21 36 0 0 chr3R 5818680 5818708 -22086345 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 264 100 0 0 chr3R 5819179 5819219 -22085834 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 629 215 103 0 25 chr3R 5819868 5819908 -22085145 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 629 222 37 0 0 chr3R 5835190 5835217 -22069836 + (TTGG)n Simple_repeat Simple_repeat 4 30 0 4 629 186 43 0 0 chr3R 5845193 5845216 -22059837 + (TATG)n Simple_repeat Simple_repeat 2 24 0 4 629 283 194 9 9 chr3R 5846980 5847089 -22057964 + (CTG)n Simple_repeat Simple_repeat 1 109 0 4 629 24 0 0 0 chr3R 5847196 5847220 -22057833 + AT_rich Low_complexity Low_complexity 1 24 0 4 629 22 70 0 0 chr3R 5848362 5848405 -22056648 + AT_rich Low_complexity Low_complexity 1 43 0 4 629 22 0 0 0 chr3R 5850807 5850829 -22054224 + AT_rich Low_complexity Low_complexity 1 22 0 4 629 26 0 0 0 chr3R 5851659 5851685 -22053368 + AT_rich Low_complexity Low_complexity 1 26 0 4 629 22 0 0 0 chr3R 5852784 5852806 -22052247 + AT_rich Low_complexity Low_complexity 1 22 0 4 629 21 36 0 0 chr3R 5854215 5854243 -22050810 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 183 139 0 0 chr3R 5854724 5854760 -22050293 + (CAA)n Simple_repeat Simple_repeat 1 36 0 4 629 288 0 0 0 chr3R 5861068 5861100 -22043953 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 629 23 0 0 0 chr3R 5867226 5867249 -22037804 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 231 218 0 0 chr3R 5868165 5868220 -22036833 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 629 31 68 0 0 chr3R 5868773 5868832 -22036221 + AT_rich Low_complexity Low_complexity 1 59 0 4 629 24 67 0 0 chr3R 5873827 5873872 -22031181 + AT_rich Low_complexity Low_complexity 1 45 0 4 629 188 88 0 56 chr3R 5885172 5885208 -22019845 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 4 629 1112 170 0 0 chr3R 5889153 5889353 -22015700 - XDMR Unknown Unknown -161 200 1 4 629 810 161 76 27 chr3R 5889376 5889561 -22015492 - XDMR Unknown Unknown -19 342 149 4 629 38 0 0 0 chr3R 5891290 5891328 -22013725 + AT_rich Low_complexity Low_complexity 1 38 0 4 629 23 0 0 0 chr3R 5892754 5892777 -22012276 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 25 51 0 0 chr3R 5892846 5892885 -22012168 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 27 29 0 0 chr3R 5893285 5893319 -22011734 + AT_rich Low_complexity Low_complexity 1 34 0 4 629 25 51 0 0 chr3R 5893464 5893503 -22011550 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 25 51 0 0 chr3R 5895439 5895478 -22009575 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 32 0 0 0 chr3R 5896668 5896700 -22008353 + AT_rich Low_complexity Low_complexity 1 32 0 4 629 192 40 0 0 chr3R 5896707 5896732 -22008321 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 629 235 258 0 0 chr3R 5896920 5896982 -22008071 + C-rich Low_complexity Low_complexity 61 122 0 4 630 29 0 0 0 chr3R 5899686 5899715 -22005338 + AT_rich Low_complexity Low_complexity 1 29 0 4 630 29 60 0 0 chr3R 5902367 5902417 -22002636 + AT_rich Low_complexity Low_complexity 1 50 0 4 630 216 149 0 0 chr3R 5903384 5903431 -22001622 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 630 231 125 0 0 chr3R 5904774 5904814 -22000239 + (GAAAA)n Simple_repeat Simple_repeat 3 42 0 4 630 220 224 0 0 chr3R 5904909 5904958 -22000095 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 630 282 87 0 0 chr3R 5905226 5905272 -21999781 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 630 21 0 0 0 chr3R 5907126 5907147 -21997906 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 222 37 0 0 chr3R 5910968 5910995 -21994058 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 630 225 0 0 0 chr3R 5913011 5913036 -21992017 + (TC)n Simple_repeat Simple_repeat 1 25 0 4 630 219 69 0 0 chr3R 5915867 5915896 -21989157 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 630 210 191 0 0 chr3R 5916063 5916105 -21988948 + (TATG)n Simple_repeat Simple_repeat 2 43 0 4 630 213 39 0 0 chr3R 5922761 5922787 -21982266 + (CCTG)n Simple_repeat Simple_repeat 4 29 0 4 630 35 0 0 0 chr3R 5927162 5927197 -21977856 + AT_rich Low_complexity Low_complexity 1 35 0 4 630 24 0 0 0 chr3R 5927229 5927253 -21977800 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 22 56 0 0 chr3R 5927712 5927748 -21977305 + AT_rich Low_complexity Low_complexity 1 36 0 4 630 219 157 0 0 chr3R 5928542 5928593 -21976460 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 630 185 43 41 61 chr3R 5928754 5928803 -21976250 + (TTGTG)n Simple_repeat Simple_repeat 5 52 0 4 630 257 270 22 11 chr3R 5929031 5929121 -21975932 + (CTG)n Simple_repeat Simple_repeat 1 91 0 4 630 27 49 0 0 chr3R 5929587 5929628 -21975425 + AT_rich Low_complexity Low_complexity 1 41 0 4 630 208 207 17 17 chr3R 5933202 5933261 -21971792 + (TTG)n Simple_repeat Simple_repeat 1 59 0 4 630 239 203 16 0 chr3R 5934183 5934247 -21970806 + (TGG)n Simple_repeat Simple_repeat 1 65 0 4 630 29 28 0 0 chr3R 5937784 5937820 -21967233 + AT_rich Low_complexity Low_complexity 1 36 0 4 630 222 208 0 40 chr3R 5938165 5938240 -21966813 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 630 24 0 0 0 chr3R 5940132 5940156 -21964897 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 26 30 0 0 chr3R 5947264 5947297 -21957756 + AT_rich Low_complexity Low_complexity 1 33 0 4 630 22 35 0 0 chr3R 5948110 5948139 -21956914 + AT_rich Low_complexity Low_complexity 1 29 0 4 630 24 0 0 0 chr3R 5951001 5951025 -21954028 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 24 53 0 0 chr3R 5955939 5955977 -21949076 + AT_rich Low_complexity Low_complexity 1 38 0 4 630 218 203 0 48 chr3R 5958987 5959049 -21946004 + (CAA)n Simple_repeat Simple_repeat 2 60 0 4 630 21 36 0 0 chr3R 5961683 5961711 -21943342 + AT_rich Low_complexity Low_complexity 1 28 0 4 630 49 43 0 0 chr3R 5961950 5962020 -21943033 + AT_rich Low_complexity Low_complexity 1 70 0 4 630 203 171 0 0 chr3R 5964782 5964817 -21940236 + GA-rich Low_complexity Low_complexity 1 35 0 4 630 35 0 0 0 chr3R 5970023 5970058 -21934995 + AT_rich Low_complexity Low_complexity 1 35 0 4 630 240 220 17 0 chr3R 5970815 5970874 -21934179 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 630 207 170 0 0 chr3R 5971287 5971334 -21933719 + (GATTG)n Simple_repeat Simple_repeat 5 51 0 4 630 846 130 60 33 chr3R 5977815 5977966 -21927087 - DNAREP1_DM LINE Penelope -439 155 1 4 630 23 54 0 0 chr3R 5978640 5978677 -21926376 + AT_rich Low_complexity Low_complexity 1 37 0 4 630 24 67 0 0 chr3R 5988298 5988343 -21916710 + AT_rich Low_complexity Low_complexity 1 45 0 4 630 24 96 0 0 chr3R 5988499 5988572 -21916481 + AT_rich Low_complexity Low_complexity 1 73 0 4 630 24 0 0 0 chr3R 5994318 5994342 -21910711 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 203 118 0 73 chr3R 5996401 5996456 -21908597 + (TAA)n Simple_repeat Simple_repeat 2 52 0 4 630 24 0 0 0 chr3R 5996474 5996498 -21908555 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 23 54 0 0 chr3R 5996886 5996923 -21908130 + AT_rich Low_complexity Low_complexity 1 37 0 4 630 21 0 0 0 chr3R 5996988 5997009 -21908044 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 279 0 0 0 chr3R 5997775 5997806 -21907247 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 630 21 0 0 0 chr3R 6005502 6005523 -21899530 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 21 71 0 0 chr3R 6009998 6010040 -21895013 + AT_rich Low_complexity Low_complexity 1 42 0 4 630 21 0 0 0 chr3R 6011677 6011698 -21893355 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 21 36 0 0 chr3R 6015829 6015857 -21889196 + AT_rich Low_complexity Low_complexity 1 28 0 4 630 236 161 16 0 chr3R 6016730 6016792 -21888261 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 630 226 222 0 0 chr3R 6019055 6019100 -21885953 + (TCCA)n Simple_repeat Simple_repeat 2 46 0 4 630 26 82 0 0 chr3R 6019479 6019540 -21885513 + AT_rich Low_complexity Low_complexity 1 61 0 4 630 22 0 0 0 chr3R 6022142 6022164 -21882889 + AT_rich Low_complexity Low_complexity 1 22 0 4 630 3368 5 7 7 chr3R 6022728 6023142 -21881911 + DM297_LTR LTR Gypsy 1 414 0 4 630 37582 7 2 0 chr3R 6023142 6027676 -21877377 + DM297_I LTR Gypsy 1 4540 -1627 4 630 4599 12 0 0 chr3R 6027658 6028244 -21876809 + DM297_I LTR Gypsy 5582 6167 0 4 630 3368 5 7 7 chr3R 6028244 6028658 -21876395 + DM297_LTR LTR Gypsy 1 414 0 4 630 186 209 0 0 chr3R 6028902 6028945 -21876108 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 4 631 22 35 0 0 chr3R 6030711 6030740 -21874313 + AT_rich Low_complexity Low_complexity 1 29 0 4 631 23 33 0 0 chr3R 6033708 6033738 -21871315 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 21 0 0 0 chr3R 6038214 6038235 -21866818 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 29 47 0 0 chr3R 6039338 6039381 -21865672 + AT_rich Low_complexity Low_complexity 1 43 0 4 631 22 35 0 0 chr3R 6040391 6040420 -21864633 + AT_rich Low_complexity Low_complexity 1 29 0 4 631 21 57 0 0 chr3R 6042362 6042397 -21862656 + AT_rich Low_complexity Low_complexity 1 35 0 4 631 27 29 0 0 chr3R 6042466 6042500 -21862553 + AT_rich Low_complexity Low_complexity 1 34 0 4 631 28 0 0 0 chr3R 6045312 6045340 -21859713 + AT_rich Low_complexity Low_complexity 1 28 0 4 631 25 65 0 0 chr3R 6046317 6046363 -21858690 + AT_rich Low_complexity Low_complexity 1 46 0 4 631 213 39 0 0 chr3R 6048038 6048064 -21856989 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 631 21 0 0 0 chr3R 6052859 6052880 -21852173 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 227 274 0 36 chr3R 6054430 6054570 -21850483 + (CAA)n Simple_repeat Simple_repeat 1 135 0 4 631 291 71 0 0 chr3R 6054862 6054904 -21850149 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 631 213 216 20 0 chr3R 6055318 6055369 -21849684 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 631 2426 8 0 0 chr3R 6057558 6057825 -21847228 - MDG3_LTR LTR Gypsy 0 267 1 4 631 45693 1 0 0 chr3R 6057825 6062812 -21842241 - MDG3_I LTR Gypsy 0 4986 1 4 631 2426 8 0 0 chr3R 6062811 6063078 -21841975 - MDG3_LTR LTR Gypsy 0 267 1 4 631 23 33 0 0 chr3R 6065062 6065092 -21839961 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 21 0 0 0 chr3R 6076893 6076914 -21828139 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 23 54 0 0 chr3R 6080976 6081013 -21824040 + AT_rich Low_complexity Low_complexity 1 37 0 4 631 16974 6 2 1 chr3R 6081130 6083117 -21821936 - I_DM LINE I -4136 2095 106 4 631 30046 2 1 0 chr3R 6083117 6086524 -21818529 + I_DM LINE I 2066 5473 -758 4 631 36 40 0 0 chr3R 6087743 6087793 -21817260 + AT_rich Low_complexity Low_complexity 1 50 0 4 631 228 159 23 0 chr3R 6090484 6090528 -21814525 + (CAG)n Simple_repeat Simple_repeat 2 46 0 4 631 240 185 0 0 chr3R 6093034 6093088 -21811965 + CT-rich Low_complexity Low_complexity 1 54 0 4 631 23 0 0 0 chr3R 6094970 6094993 -21810060 + AT_rich Low_complexity Low_complexity 1 23 0 4 631 23 33 0 0 chr3R 6095341 6095371 -21809682 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 341 156 13 0 chr3R 6097374 6097451 -21807602 + (TA)n Simple_repeat Simple_repeat 2 79 0 4 631 23 33 0 0 chr3R 6097480 6097510 -21807543 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 36 0 0 0 chr3R 6100660 6100696 -21804357 + AT_rich Low_complexity Low_complexity 1 36 0 4 631 210 233 0 0 chr3R 6101643 6101703 -21803350 + (TCTCTG)n Simple_repeat Simple_repeat 1 60 0 4 631 180 77 0 0 chr3R 6104179 6104205 -21800848 + (T)n Simple_repeat Simple_repeat 1 26 0 4 631 207 208 0 19 chr3R 6106726 6106780 -21798273 + (TTG)n Simple_repeat Simple_repeat 2 54 0 4 631 207 0 0 0 chr3R 6108009 6108032 -21797021 + (T)n Simple_repeat Simple_repeat 1 23 0 4 631 210 191 0 0 chr3R 6108811 6108853 -21796200 + (CAT)n Simple_repeat Simple_repeat 2 43 0 4 631 21 36 0 0 chr3R 6112362 6112390 -21792663 + AT_rich Low_complexity Low_complexity 1 28 0 4 631 195 69 0 0 chr3R 6112899 6112928 -21792125 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 631 210 186 23 0 chr3R 6113510 6113553 -21791500 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 4 631 21 57 0 0 chr3R 6113860 6113895 -21791158 + AT_rich Low_complexity Low_complexity 1 35 0 4 631 23 0 0 0 chr3R 6114041 6114064 -21790989 + AT_rich Low_complexity Low_complexity 1 23 0 4 631 218 250 0 0 chr3R 6116846 6116894 -21788159 + (CCCCAG)n Simple_repeat Simple_repeat 4 51 0 4 631 21 0 0 0 chr3R 6117262 6117283 -21787770 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 30 27 0 0 chr3R 6117787 6117824 -21787229 + AT_rich Low_complexity Low_complexity 1 37 0 4 631 207 171 0 0 chr3R 6118870 6118905 -21786148 + CT-rich Low_complexity Low_complexity 1 35 0 4 631 38 51 0 0 chr3R 6120743 6120802 -21784251 + AT_rich Low_complexity Low_complexity 1 59 0 4 631 271 205 39 0 chr3R 6121567 6121645 -21783408 + ROO_I LTR Pao 643 723 -7533 4 631 180 0 0 0 chr3R 6121896 6121916 -21783137 + (A)n Simple_repeat Simple_repeat 1 20 0 4 631 206 215 0 12 chr3R 6122153 6122233 -21782820 + (TTG)n Simple_repeat Simple_repeat 2 80 0 4 631 237 83 0 0 chr3R 6125044 6125080 -21779973 + (TCCA)n Simple_repeat Simple_repeat 4 39 0 4 631 24 0 0 0 chr3R 6126204 6126228 -21778825 + AT_rich Low_complexity Low_complexity 1 24 0 4 631 204 149 0 0 chr3R 6126800 6126847 -21778206 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 631 223 116 47 0 chr3R 6127185 6127228 -21777825 + (CCAA)n Simple_repeat Simple_repeat 4 48 0 4 631 227 310 6 25 chr3R 6127838 6128000 -21777053 + (CCA)n Simple_repeat Simple_repeat 2 160 0 4 631 21 71 0 0 chr3R 6133902 6133944 -21771109 + AT_rich Low_complexity Low_complexity 1 42 0 4 631 22 56 0 0 chr3R 6136304 6136340 -21768713 + AT_rich Low_complexity Low_complexity 1 36 0 4 631 234 238 9 45 chr3R 6141806 6141916 -21763137 + A-rich Low_complexity Low_complexity 3 108 0 4 631 21 0 0 0 chr3R 6147882 6147903 -21757150 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 180 77 0 0 chr3R 6153478 6153504 -21751549 + (TCC)n Simple_repeat Simple_repeat 3 28 0 4 631 202 188 0 0 chr3R 6153824 6153856 -21751197 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 631 31 68 0 0 chr3R 6156377 6156436 -21748617 + AT_rich Low_complexity Low_complexity 1 59 0 4 631 212 122 0 47 chr3R 6157022 6157065 -21747988 + CT-rich Low_complexity Low_complexity 3 43 0 4 631 21 0 0 0 chr3R 6157186 6157207 -21747846 + AT_rich Low_complexity Low_complexity 1 21 0 4 632 3575 5 10 7 chr3R 6167387 6167800 -21737253 - DM297_LTR LTR Gypsy 0 414 1 4 632 46433 38 6 3 chr3R 6167798 6173891 -21731162 - DM297_I LTR Gypsy 0 6420 1 4 632 3575 5 10 7 chr3R 6173891 6174304 -21730749 - DM297_LTR LTR Gypsy 0 414 1 4 632 58 0 0 0 chr3R 6174304 6174362 -21730691 + AT_rich Low_complexity Low_complexity 1 58 0 4 632 36 0 0 0 chr3R 6175352 6175388 -21729665 + AT_rich Low_complexity Low_complexity 1 36 0 4 632 24 0 0 0 chr3R 6175700 6175724 -21729329 + AT_rich Low_complexity Low_complexity 1 24 0 4 632 263 304 0 0 chr3R 6183347 6183416 -21721637 + (TATG)n Simple_repeat Simple_repeat 3 71 0 4 632 28 48 0 0 chr3R 6183610 6183652 -21721401 + AT_rich Low_complexity Low_complexity 1 42 0 4 632 27 0 0 0 chr3R 6187334 6187361 -21717692 + AT_rich Low_complexity Low_complexity 1 27 0 4 632 24 0 0 0 chr3R 6192113 6192137 -21712916 + AT_rich Low_complexity Low_complexity 1 24 0 4 632 198 103 0 0 chr3R 6192637 6192666 -21712387 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 4 632 219 36 0 0 chr3R 6192836 6192864 -21712189 + (TGG)n Simple_repeat Simple_repeat 2 29 0 4 632 210 37 0 0 chr3R 6194514 6194541 -21710512 + (T)n Simple_repeat Simple_repeat 1 27 0 4 632 24 32 0 0 chr3R 6196359 6196390 -21708663 + AT_rich Low_complexity Low_complexity 1 31 0 4 632 189 94 0 0 chr3R 6197064 6197096 -21707957 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 4 632 24 0 0 0 chr3R 6197728 6197752 -21707301 + AT_rich Low_complexity Low_complexity 1 24 0 4 632 22 0 0 0 chr3R 6198276 6198298 -21706755 + AT_rich Low_complexity Low_complexity 1 22 0 4 632 31 44 0 0 chr3R 6200023 6200068 -21704985 + AT_rich Low_complexity Low_complexity 1 45 0 4 632 23 33 0 0 chr3R 6201347 6201377 -21703676 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 23 33 0 0 chr3R 6202084 6202114 -21702939 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 25 31 0 0 chr3R 6204607 6204639 -21700414 + AT_rich Low_complexity Low_complexity 1 32 0 4 632 26 0 0 0 chr3R 6204947 6204973 -21700080 + AT_rich Low_complexity Low_complexity 1 26 0 4 632 23 54 0 0 chr3R 6207567 6207604 -21697449 + AT_rich Low_complexity Low_complexity 1 37 0 4 632 218 195 0 0 chr3R 6208970 6209011 -21696042 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 632 23 54 0 0 chr3R 6211178 6211215 -21693838 + AT_rich Low_complexity Low_complexity 1 37 0 4 632 218 195 0 0 chr3R 6212581 6212622 -21692431 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 632 218 228 0 17 chr3R 6217652 6217710 -21687343 + (ATTCG)n Simple_repeat Simple_repeat 1 57 0 4 632 23 33 0 0 chr3R 6221590 6221620 -21683433 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 209 258 22 33 chr3R 6222857 6222949 -21682104 + A-rich Low_complexity Low_complexity 1 91 0 4 632 211 194 0 0 chr3R 6223867 6223903 -21681150 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 632 255 61 0 0 chr3R 6226143 6226176 -21678877 + (TTA)n Simple_repeat Simple_repeat 1 33 0 4 632 21 82 0 0 chr3R 6226424 6226473 -21678580 + AT_rich Low_complexity Low_complexity 1 49 0 4 632 22 0 0 0 chr3R 6237300 6237322 -21667731 + AT_rich Low_complexity Low_complexity 1 22 0 4 632 490 147 38 29 chr3R 6243410 6243515 -21661538 - DNAREP1_DM LINE Penelope -488 106 1 4 632 21 57 0 0 chr3R 6244975 6245010 -21660043 + AT_rich Low_complexity Low_complexity 1 35 0 4 632 330 182 0 0 chr3R 6246279 6246334 -21658719 + DNAREP1_DM LINE Penelope 28 82 -512 4 632 180 125 0 0 chr3R 6246941 6246973 -21658080 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 632 186 103 0 0 chr3R 6247115 6247144 -21657909 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 632 24 32 0 0 chr3R 6248008 6248039 -21657014 + AT_rich Low_complexity Low_complexity 1 31 0 4 632 35 24 0 0 chr3R 6248101 6248143 -21656910 + AT_rich Low_complexity Low_complexity 1 42 0 4 632 180 0 0 0 chr3R 6248840 6248860 -21656193 + (A)n Simple_repeat Simple_repeat 1 20 0 4 632 180 0 0 0 chr3R 6250826 6250846 -21654207 + (TA)n Simple_repeat Simple_repeat 1 20 0 4 632 300 70 0 0 chr3R 6252741 6252784 -21652269 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 632 24 32 0 0 chr3R 6252828 6252859 -21652194 + AT_rich Low_complexity Low_complexity 1 31 0 4 632 192 167 0 0 chr3R 6253880 6253928 -21651125 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 632 180 152 0 0 chr3R 6256955 6256988 -21648065 + (ATG)n Simple_repeat Simple_repeat 1 33 0 4 632 180 0 0 0 chr3R 6259407 6259427 -21645626 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 632 270 274 0 0 chr3R 6259752 6259847 -21645206 + (TG)n Simple_repeat Simple_repeat 2 96 0 4 632 28 0 0 0 chr3R 6260605 6260633 -21644420 + AT_rich Low_complexity Low_complexity 1 28 0 4 632 183 42 0 0 chr3R 6265843 6265867 -21639186 + (A)n Simple_repeat Simple_repeat 1 24 0 4 632 195 189 0 0 chr3R 6267793 6267846 -21637207 + (CTG)n Simple_repeat Simple_repeat 2 54 0 4 632 201 191 21 0 chr3R 6268283 6268330 -21636723 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 632 23 68 0 0 chr3R 6269239 6269283 -21635770 + AT_rich Low_complexity Low_complexity 1 44 0 4 632 228 86 0 0 chr3R 6271330 6271365 -21633688 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 632 21 36 0 0 chr3R 6276599 6276627 -21628426 + AT_rich Low_complexity Low_complexity 1 28 0 4 632 198 0 0 0 chr3R 6277259 6277281 -21627772 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 632 219 36 0 0 chr3R 6277598 6277626 -21627427 + (GGAGAA)n Simple_repeat Simple_repeat 3 30 0 4 632 23 0 0 0 chr3R 6279158 6279181 -21625872 + AT_rich Low_complexity Low_complexity 1 23 0 4 632 195 139 0 0 chr3R 6280308 6280344 -21624709 + (TTCTCC)n Simple_repeat Simple_repeat 5 40 0 4 632 23 33 0 0 chr3R 6280859 6280889 -21624164 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 183 80 0 0 chr3R 6282309 6282334 -21622719 + (CATCG)n Simple_repeat Simple_repeat 4 28 0 4 633 222 118 0 0 chr3R 6292812 6292846 -21612207 + (ATTCG)n Simple_repeat Simple_repeat 1 34 0 4 633 260 182 55 0 chr3R 6295261 6295316 -21609737 + ROO_I LTR Pao 675 732 -7524 4 633 225 191 15 45 chr3R 6298720 6298786 -21606267 + (CTG)n Simple_repeat Simple_repeat 3 66 0 4 633 267 190 0 37 chr3R 6299391 6299473 -21605580 + ROO_I LTR Pao 651 729 -7527 4 633 186 167 0 0 chr3R 6299790 6299826 -21605227 + A-rich Low_complexity Low_complexity 1 36 0 4 633 246 105 0 0 chr3R 6300306 6300344 -21604709 + (TTG)n Simple_repeat Simple_repeat 1 38 0 4 633 22 0 0 0 chr3R 6305973 6305995 -21599058 + AT_rich Low_complexity Low_complexity 1 22 0 4 633 180 0 0 0 chr3R 6309188 6309208 -21595845 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 633 202 135 0 55 chr3R 6311355 6311410 -21593643 + (CATCC)n Simple_repeat Simple_repeat 3 54 0 4 633 27 29 0 0 chr3R 6311783 6311817 -21593236 + AT_rich Low_complexity Low_complexity 1 34 0 4 633 208 196 0 42 chr3R 6312519 6312567 -21592486 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 633 249 119 0 0 chr3R 6316930 6316972 -21588081 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 633 245 128 0 21 chr3R 6317919 6317967 -21587086 + (CAA)n Simple_repeat Simple_repeat 3 49 0 4 633 203 182 0 0 chr3R 6318203 6318236 -21586817 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 633 213 94 0 0 chr3R 6319375 6319407 -21585646 + (CCCTG)n Simple_repeat Simple_repeat 4 35 0 4 633 21 36 0 0 chr3R 6320757 6320785 -21584268 + AT_rich Low_complexity Low_complexity 1 28 0 4 633 252 0 0 0 chr3R 6321119 6321147 -21583906 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 633 32 0 0 0 chr3R 6321257 6321289 -21583764 + AT_rich Low_complexity Low_complexity 1 32 0 4 633 31 0 0 0 chr3R 6323792 6323823 -21581230 + AT_rich Low_complexity Low_complexity 1 31 0 4 633 245 262 0 0 chr3R 6328000 6328061 -21576992 - ROO_I LTR Pao -7552 704 644 4 633 278 50 0 24 chr3R 6328370 6328411 -21576642 + (CAG)n Simple_repeat Simple_repeat 1 40 0 4 633 22 0 0 0 chr3R 6328798 6328820 -21576233 + AT_rich Low_complexity Low_complexity 1 22 0 4 633 249 83 0 0 chr3R 6330779 6330815 -21574238 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 4 633 25 51 0 0 chr3R 6331145 6331184 -21573869 + AT_rich Low_complexity Low_complexity 1 39 0 4 633 23 0 0 0 chr3R 6332633 6332656 -21572397 + AT_rich Low_complexity Low_complexity 1 23 0 4 633 270 56 0 0 chr3R 6333215 6333251 -21571802 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 633 180 0 0 0 chr3R 6333698 6333718 -21571335 + (CTCG)n Simple_repeat Simple_repeat 4 23 0 4 633 25 65 0 0 chr3R 6335643 6335689 -21569364 + AT_rich Low_complexity Low_complexity 1 46 0 4 633 226 270 27 0 chr3R 6336601 6336675 -21568378 + T-rich Low_complexity Low_complexity 2 77 0 4 633 191 213 0 13 chr3R 6336736 6336812 -21568241 + (TTG)n Simple_repeat Simple_repeat 1 75 0 4 633 29 0 0 0 chr3R 6337940 6337969 -21567084 + AT_rich Low_complexity Low_complexity 1 29 0 4 633 204 40 0 0 chr3R 6343073 6343098 -21561955 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 633 213 256 0 0 chr3R 6343317 6343399 -21561654 + (CAA)n Simple_repeat Simple_repeat 1 82 0 4 633 21 0 0 0 chr3R 6343721 6343742 -21561311 + AT_rich Low_complexity Low_complexity 1 21 0 4 633 229 278 0 0 chr3R 6344282 6344354 -21560699 + (TTG)n Simple_repeat Simple_repeat 1 72 0 4 633 222 37 0 0 chr3R 6345340 6345367 -21559686 + (T)n Simple_repeat Simple_repeat 1 27 0 4 633 369 136 0 0 chr3R 6347659 6347725 -21557328 + (ATG)n Simple_repeat Simple_repeat 2 67 0 4 633 22 56 0 0 chr3R 6348284 6348320 -21556733 + AT_rich Low_complexity Low_complexity 1 36 0 4 633 202 154 0 25 chr3R 6349615 6349655 -21555398 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 633 207 0 0 0 chr3R 6350903 6350926 -21554127 + (A)n Simple_repeat Simple_repeat 1 23 0 4 633 222 156 0 0 chr3R 6351869 6351914 -21553139 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 633 210 37 0 0 chr3R 6352061 6352088 -21552965 + (TAA)n Simple_repeat Simple_repeat 2 28 0 4 633 206 281 0 0 chr3R 6353517 6353574 -21551479 + GA-rich Low_complexity Low_complexity 2 58 0 4 633 201 241 11 67 chr3R 6354157 6354246 -21550807 + A-rich Low_complexity Low_complexity 2 85 0 4 633 300 127 0 0 chr3R 6354556 6354611 -21550442 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 633 26 30 0 0 chr3R 6358133 6358166 -21546887 + AT_rich Low_complexity Low_complexity 1 33 0 4 633 211 150 49 16 chr3R 6361084 6361145 -21543908 + (TAA)n Simple_repeat Simple_repeat 1 63 0 4 633 220 216 13 39 chr3R 6361484 6361561 -21543492 + A-rich Low_complexity Low_complexity 3 77 0 4 633 24 0 0 0 chr3R 6362387 6362411 -21542642 + AT_rich Low_complexity Low_complexity 1 24 0 4 633 30 89 0 0 chr3R 6362901 6362980 -21542073 + AT_rich Low_complexity Low_complexity 1 79 0 4 633 25 51 0 0 chr3R 6363839 6363878 -21541175 + AT_rich Low_complexity Low_complexity 1 39 0 4 633 189 0 0 0 chr3R 6365592 6365613 -21539440 + (A)n Simple_repeat Simple_repeat 1 21 0 4 633 201 200 22 0 chr3R 6367005 6367050 -21538003 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 633 208 311 0 0 chr3R 6367619 6367693 -21537360 + T-rich Low_complexity Low_complexity 1 74 0 4 633 216 0 0 0 chr3R 6371875 6371899 -21533154 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 633 208 161 17 35 chr3R 6371972 6372030 -21533023 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 633 228 67 0 0 chr3R 6372314 6372344 -21532709 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 633 27 49 0 0 chr3R 6373159 6373200 -21531853 + AT_rich Low_complexity Low_complexity 1 41 0 4 633 23 54 0 0 chr3R 6373894 6373931 -21531122 + AT_rich Low_complexity Low_complexity 1 37 0 4 633 23 54 0 0 chr3R 6375261 6375298 -21529755 + AT_rich Low_complexity Low_complexity 1 37 0 4 633 189 175 0 0 chr3R 6375839 6375879 -21529174 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 4 633 183 162 0 0 chr3R 6376212 6376249 -21528804 + (GAGTG)n Simple_repeat Simple_repeat 2 38 0 4 633 189 0 0 0 chr3R 6376420 6376441 -21528612 + (CTG)n Simple_repeat Simple_repeat 2 22 0 4 633 214 192 0 19 chr3R 6376525 6376578 -21528475 + (TTTCG)n Simple_repeat Simple_repeat 3 54 0 4 633 206 250 0 0 chr3R 6376687 6376739 -21528314 + T-rich Low_complexity Low_complexity 1 52 0 4 633 29 0 0 0 chr3R 6378212 6378241 -21526812 + AT_rich Low_complexity Low_complexity 1 29 0 4 633 23 0 0 0 chr3R 6381151 6381174 -21523879 + AT_rich Low_complexity Low_complexity 1 23 0 4 633 21 0 0 0 chr3R 6382553 6382574 -21522479 + AT_rich Low_complexity Low_complexity 1 21 0 4 633 285 109 0 0 chr3R 6383247 6383293 -21521760 + (TCTG)n Simple_repeat Simple_repeat 2 47 0 4 633 21 57 0 0 chr3R 6384419 6384454 -21520599 + AT_rich Low_complexity Low_complexity 1 35 0 4 633 25 0 0 0 chr3R 6386225 6386250 -21518803 + AT_rich Low_complexity Low_complexity 1 25 0 4 633 305 93 0 18 chr3R 6388128 6388183 -21516870 + (CGAAA)n Simple_repeat Simple_repeat 5 58 0 4 633 200 200 0 0 chr3R 6388321 6388361 -21516692 + (CACCAT)n Simple_repeat Simple_repeat 4 43 0 4 633 270 95 0 0 chr3R 6389045 6389087 -21515966 + (CAATC)n Simple_repeat Simple_repeat 5 46 0 4 633 207 0 0 0 chr3R 6393573 6393596 -21511457 + (T)n Simple_repeat Simple_repeat 1 23 0 4 633 238 123 17 17 chr3R 6395426 6395484 -21509569 + (CAGT)n Simple_repeat Simple_repeat 2 59 0 4 633 186 71 0 0 chr3R 6396123 6396151 -21508902 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 633 216 229 21 0 chr3R 6396376 6396424 -21508629 + (TATATG)n Simple_repeat Simple_repeat 1 49 0 4 633 222 160 0 0 chr3R 6396543 6396593 -21508460 + (CGGA)n Simple_repeat Simple_repeat 2 51 0 4 633 213 200 18 35 chr3R 6397916 6397973 -21507080 + (CAGA)n Simple_repeat Simple_repeat 4 59 0 4 633 207 0 0 0 chr3R 6398514 6398537 -21506516 + (CAT)n Simple_repeat Simple_repeat 1 23 0 4 633 22 0 0 0 chr3R 6399095 6399117 -21505936 + AT_rich Low_complexity Low_complexity 1 22 0 4 633 234 0 0 0 chr3R 6399489 6399515 -21505538 + (CAT)n Simple_repeat Simple_repeat 3 28 0 4 633 21 0 0 0 chr3R 6400307 6400328 -21504725 + AT_rich Low_complexity Low_complexity 1 21 0 4 633 184 175 17 34 chr3R 6400944 6401003 -21504050 + (CAA)n Simple_repeat Simple_repeat 1 58 0 4 633 207 139 0 0 chr3R 6403496 6403532 -21501521 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 4 633 210 71 0 0 chr3R 6404622 6404650 -21500403 + (CCA)n Simple_repeat Simple_repeat 2 29 0 4 633 33 56 0 0 chr3R 6407429 6407483 -21497570 + AT_rich Low_complexity Low_complexity 1 54 0 4 633 32 98 0 0 chr3R 6407626 6407728 -21497325 + AT_rich Low_complexity Low_complexity 1 102 0 4 633 204 146 20 40 chr3R 6407792 6407842 -21497211 + T-rich Low_complexity Low_complexity 6 54 0 4 633 209 263 10 29 chr3R 6409928 6410030 -21495023 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 633 23 0 0 0 chr3R 6410214 6410237 -21494816 + AT_rich Low_complexity Low_complexity 1 23 0 4 633 180 189 0 42 chr3R 6410830 6410902 -21494151 + (CTG)n Simple_repeat Simple_repeat 2 70 0 4 633 237 220 7 27 chr3R 6410966 6411052 -21494001 + T-rich Low_complexity Low_complexity 1 84 0 4 633 183 129 0 0 chr3R 6412375 6412406 -21492647 + (CAGC)n Simple_repeat Simple_repeat 3 33 0 4 633 223 191 0 0 chr3R 6412795 6412837 -21492216 + (CAA)n Simple_repeat Simple_repeat 3 44 0 4 633 234 81 0 0 chr3R 6412912 6412949 -21492104 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 633 224 122 24 0 chr3R 6413387 6413428 -21491625 + (CTG)n Simple_repeat Simple_repeat 3 44 0 4 633 300 111 0 0 chr3R 6413574 6413619 -21491434 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 633 287 339 0 0 chr3R 6414470 6414588 -21490465 + (TCTG)n Simple_repeat Simple_repeat 1 118 0 4 633 192 212 0 0 chr3R 6414589 6414655 -21490398 + T-rich Low_complexity Low_complexity 1 66 0 4 633 201 94 0 0 chr3R 6414906 6414938 -21490115 + (T)n Simple_repeat Simple_repeat 1 32 0 4 633 186 118 0 0 chr3R 6419112 6419146 -21485907 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 633 261 0 0 0 chr3R 6420890 6420919 -21484134 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 633 24 53 0 0 chr3R 6421786 6421824 -21483229 + AT_rich Low_complexity Low_complexity 1 38 0 4 633 183 184 0 0 chr3R 6422235 6422273 -21482780 + (CATA)n Simple_repeat Simple_repeat 3 40 0 4 634 26 0 0 0 chr3R 6423422 6423448 -21481605 + AT_rich Low_complexity Low_complexity 1 26 0 4 634 222 91 0 0 chr3R 6423752 6423785 -21481268 + (TTG)n Simple_repeat Simple_repeat 2 34 0 4 634 208 122 49 0 chr3R 6425568 6425609 -21479444 + T-rich Low_complexity Low_complexity 2 44 0 4 634 246 32 0 0 chr3R 6426383 6426414 -21478639 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 634 261 0 0 0 chr3R 6426809 6426838 -21478215 + (CAT)n Simple_repeat Simple_repeat 1 29 0 4 634 198 0 0 0 chr3R 6427746 6427768 -21477285 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 634 246 156 0 0 chr3R 6427884 6427929 -21477124 + (CAG)n Simple_repeat Simple_repeat 2 46 0 4 634 22 0 0 0 chr3R 6429735 6429757 -21475296 + AT_rich Low_complexity Low_complexity 1 22 0 4 634 180 0 0 0 chr3R 6430007 6430027 -21475026 + (TTGG)n Simple_repeat Simple_repeat 3 22 0 4 634 180 77 0 0 chr3R 6433218 6433244 -21471809 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 4 634 25 31 0 0 chr3R 6437063 6437095 -21467958 + AT_rich Low_complexity Low_complexity 1 32 0 4 634 180 0 0 0 chr3R 6437640 6437660 -21467393 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 634 203 152 0 0 chr3R 6438251 6438284 -21466769 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 634 243 217 0 28 chr3R 6439225 6439296 -21465757 + (TTG)n Simple_repeat Simple_repeat 1 69 0 4 634 201 39 0 0 chr3R 6439843 6439869 -21465184 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 634 21 57 0 0 chr3R 6441180 6441215 -21463838 + AT_rich Low_complexity Low_complexity 1 35 0 4 634 28 0 0 0 chr3R 6444237 6444265 -21460788 + AT_rich Low_complexity Low_complexity 1 28 0 4 634 23 0 0 0 chr3R 6444289 6444312 -21460741 + AT_rich Low_complexity Low_complexity 1 23 0 4 634 180 125 0 0 chr3R 6447994 6448026 -21457027 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 634 240 216 0 0 chr3R 6449104 6449155 -21455898 + (ATG)n Simple_repeat Simple_repeat 2 52 0 4 634 23 0 0 0 chr3R 6451939 6451962 -21453091 + AT_rich Low_complexity Low_complexity 1 23 0 4 634 24 0 0 0 chr3R 6452868 6452892 -21452161 + AT_rich Low_complexity Low_complexity 1 24 0 4 634 249 33 0 0 chr3R 6458924 6458954 -21446099 + (CTG)n Simple_repeat Simple_repeat 1 30 0 4 634 226 268 0 0 chr3R 6459933 6459989 -21445064 + (CAG)n Simple_repeat Simple_repeat 1 56 0 4 634 258 56 0 0 chr3R 6464709 6464745 -21440308 + (CGAG)n Simple_repeat Simple_repeat 2 37 0 4 634 207 150 31 62 chr3R 6465155 6465219 -21439834 + T-rich Low_complexity Low_complexity 5 66 0 4 634 192 77 0 0 chr3R 6465250 6465276 -21439777 + (CGTCG)n Simple_repeat Simple_repeat 3 28 0 4 634 183 80 0 0 chr3R 6465528 6465553 -21439500 + (CTGTG)n Simple_repeat Simple_repeat 5 29 0 4 634 33 56 0 0 chr3R 6465909 6465963 -21439090 + AT_rich Low_complexity Low_complexity 1 54 0 4 634 198 91 0 0 chr3R 6469859 6469892 -21435161 + (A)n Simple_repeat Simple_repeat 1 33 0 4 634 26 93 0 0 chr3R 6470354 6470429 -21434624 + AT_rich Low_complexity Low_complexity 1 75 0 4 634 32 26 0 0 chr3R 6473583 6473622 -21431431 + AT_rich Low_complexity Low_complexity 1 39 0 4 634 28 0 0 0 chr3R 6473813 6473841 -21431212 + AT_rich Low_complexity Low_complexity 1 28 0 4 634 21 0 0 0 chr3R 6476074 6476095 -21428958 + AT_rich Low_complexity Low_complexity 1 21 0 4 634 21 36 0 0 chr3R 6478421 6478449 -21426604 + AT_rich Low_complexity Low_complexity 1 28 0 4 634 223 111 111 0 chr3R 6479411 6479465 -21425588 + (TCCA)n Simple_repeat Simple_repeat 3 62 0 4 634 275 275 0 0 chr3R 6482492 6482583 -21422470 + A-rich Low_complexity Low_complexity 1 91 0 4 634 186 103 0 0 chr3R 6485660 6485689 -21419364 + (T)n Simple_repeat Simple_repeat 1 29 0 4 634 291 161 0 0 chr3R 6486579 6486635 -21418418 + (CGGA)n Simple_repeat Simple_repeat 2 57 0 4 634 21 57 0 0 chr3R 6487066 6487101 -21417952 + AT_rich Low_complexity Low_complexity 1 35 0 4 634 180 176 0 0 chr3R 6487530 6487564 -21417489 + A-rich Low_complexity Low_complexity 2 35 0 4 634 24 0 0 0 chr3R 6489894 6489918 -21415135 + AT_rich Low_complexity Low_complexity 1 24 0 4 634 183 80 0 0 chr3R 6491084 6491109 -21413944 + (CAAAT)n Simple_repeat Simple_repeat 1 25 0 4 634 30 0 0 0 chr3R 6491990 6492020 -21413033 + AT_rich Low_complexity Low_complexity 1 30 0 4 634 186 103 0 0 chr3R 6494181 6494210 -21410843 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 634 234 91 0 0 chr3R 6495702 6495735 -21409318 + (CAACC)n Simple_repeat Simple_repeat 4 36 0 4 634 26 30 0 0 chr3R 6499175 6499208 -21405845 + AT_rich Low_complexity Low_complexity 1 33 0 4 634 258 32 0 0 chr3R 6500261 6500292 -21404761 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 634 267 0 53 0 chr3R 6500801 6500839 -21404214 - I_DM LINE I -761 5470 5431 4 634 27 0 0 0 chr3R 6502135 6502162 -21402891 + AT_rich Low_complexity Low_complexity 1 27 0 4 634 22 0 0 0 chr3R 6505494 6505516 -21399537 + AT_rich Low_complexity Low_complexity 1 22 0 4 634 207 191 0 0 chr3R 6508549 6508591 -21396462 + GA-rich Low_complexity Low_complexity 2 43 0 4 634 261 140 0 0 chr3R 6508933 6508990 -21396063 + (T)n Simple_repeat Simple_repeat 1 57 0 4 634 234 244 0 68 chr3R 6512241 6512329 -21392724 + ROO_I LTR Pao 645 726 -7530 4 634 21 57 0 0 chr3R 6514764 6514799 -21390254 + AT_rich Low_complexity Low_complexity 1 35 0 4 634 205 217 58 0 chr3R 6516473 6516542 -21388511 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 634 241 150 62 12 chr3R 6516664 6516745 -21388308 + (CA)n Simple_repeat Simple_repeat 2 86 0 4 634 315 208 39 0 chr3R 6519742 6519819 -21385234 + (CCCGAA)n Simple_repeat Simple_repeat 4 83 0 4 634 29 70 0 0 chr3R 6529083 6529140 -21375913 + AT_rich Low_complexity Low_complexity 1 57 0 4 634 22 35 0 0 chr3R 6543133 6543162 -21361891 + AT_rich Low_complexity Low_complexity 1 29 0 4 634 27 0 0 0 chr3R 6545388 6545415 -21359638 + AT_rich Low_complexity Low_complexity 1 27 0 4 634 218 146 0 47 chr3R 6547892 6547935 -21357118 + (GGATG)n Simple_repeat Simple_repeat 1 41 0 4 635 25 0 0 0 chr3R 6553989 6554014 -21351039 + AT_rich Low_complexity Low_complexity 1 25 0 4 635 22 0 0 0 chr3R 6559416 6559438 -21345615 + AT_rich Low_complexity Low_complexity 1 22 0 4 635 27 73 0 0 chr3R 6560004 6560059 -21344994 + AT_rich Low_complexity Low_complexity 1 55 0 4 635 201 82 82 0 chr3R 6574339 6574388 -21330665 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 635 30 27 0 0 chr3R 6580344 6580381 -21324672 + AT_rich Low_complexity Low_complexity 1 37 0 4 635 22 56 0 0 chr3R 6584046 6584082 -21320971 + AT_rich Low_complexity Low_complexity 1 36 0 4 635 22 0 0 0 chr3R 6590931 6590953 -21314100 + AT_rich Low_complexity Low_complexity 1 22 0 4 635 243 61 0 0 chr3R 6593942 6593975 -21311078 + (TCC)n Simple_repeat Simple_repeat 1 33 0 4 635 185 94 31 0 chr3R 6597198 6597230 -21307823 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 635 26 0 0 0 chr3R 6599312 6599338 -21305715 + AT_rich Low_complexity Low_complexity 1 26 0 4 635 21 82 0 0 chr3R 6603879 6603928 -21301125 + AT_rich Low_complexity Low_complexity 1 49 0 4 635 24 0 0 0 chr3R 6610017 6610041 -21295012 + AT_rich Low_complexity Low_complexity 1 24 0 4 635 195 42 0 0 chr3R 6617467 6617491 -21287562 + (TATATG)n Simple_repeat Simple_repeat 5 28 0 4 635 21 36 0 0 chr3R 6624185 6624213 -21280840 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 21 0 0 0 chr3R 6624518 6624539 -21280514 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 21 36 0 0 chr3R 6626623 6626651 -21278402 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 21 36 0 0 chr3R 6627424 6627452 -21277601 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 207 0 0 0 chr3R 6629834 6629857 -21275196 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 635 4552 12 0 0 chr3R 6629951 6630458 -21274595 + DM176_LTR LTR Gypsy 1 507 0 4 635 57164 2 4 4 chr3R 6630458 6630999 -21274054 + DM176_I LTR Gypsy 1 527 -5893 4 635 208 28 26 53 chr3R 6630999 6631037 -21274016 + (TAA)n Simple_repeat Simple_repeat 3 39 0 4 635 57164 2 4 4 chr3R 6631037 6636914 -21268139 + DM176_I LTR Gypsy 528 6420 0 4 635 4552 12 0 0 chr3R 6636914 6637421 -21267632 + DM176_LTR LTR Gypsy 1 507 0 4 635 21 0 0 0 chr3R 6640727 6640748 -21264305 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 198 71 0 0 chr3R 6644122 6644150 -21260903 + (A)n Simple_repeat Simple_repeat 1 28 0 4 635 312 111 0 0 chr3R 6645666 6645720 -21259333 + (ATAGG)n Simple_repeat Simple_repeat 4 57 0 4 635 186 43 0 0 chr3R 6645952 6645975 -21259078 + (CGATG)n Simple_repeat Simple_repeat 5 27 0 4 635 189 107 0 0 chr3R 6646236 6646264 -21258789 + (CATA)n Simple_repeat Simple_repeat 3 30 0 4 635 270 0 0 0 chr3R 6646457 6646487 -21258566 + (A)n Simple_repeat Simple_repeat 1 30 0 4 635 306 148 0 0 chr3R 6647344 6647398 -21257655 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 635 243 0 0 0 chr3R 6650676 6650703 -21254350 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 635 21 0 0 0 chr3R 6652075 6652096 -21252957 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 39 0 0 0 chr3R 6652157 6652196 -21252857 + AT_rich Low_complexity Low_complexity 1 39 0 4 635 209 98 48 24 chr3R 6652514 6652556 -21252497 + (GAGTG)n Simple_repeat Simple_repeat 5 47 0 4 635 287 65 22 0 chr3R 6652643 6652689 -21252364 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 635 252 86 0 0 chr3R 6652877 6652912 -21252141 + (CTATA)n Simple_repeat Simple_repeat 5 39 0 4 635 29 0 0 0 chr3R 6653905 6653934 -21251119 + AT_rich Low_complexity Low_complexity 1 29 0 4 635 186 143 0 0 chr3R 6654372 6654407 -21250646 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 635 21 36 0 0 chr3R 6656484 6656512 -21248541 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 35 0 0 0 chr3R 6657331 6657366 -21247687 + AT_rich Low_complexity Low_complexity 1 35 0 4 635 205 233 55 0 chr3R 6658676 6658749 -21246304 + A-rich Low_complexity Low_complexity 1 77 0 4 635 204 125 0 0 chr3R 6662932 6662964 -21242089 + (CGGT)n Simple_repeat Simple_repeat 2 33 0 4 635 365 202 0 25 chr3R 6663736 6663858 -21241195 + (CAT)n Simple_repeat Simple_repeat 1 119 0 4 635 192 40 0 0 chr3R 6667756 6667781 -21237272 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 4 635 235 231 15 0 chr3R 6668011 6668076 -21236977 + (CGA)n Simple_repeat Simple_repeat 2 67 0 4 635 30 27 0 0 chr3R 6674815 6674852 -21230201 + AT_rich Low_complexity Low_complexity 1 37 0 4 635 41 0 0 0 chr3R 6675397 6675438 -21229615 + AT_rich Low_complexity Low_complexity 1 41 0 4 635 21 0 0 0 chr3R 6677480 6677501 -21227552 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 204 111 0 0 chr3R 6677820 6677856 -21227197 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 4 635 21 0 0 0 chr3R 6681983 6682004 -21223049 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 21 82 0 0 chr3R 6683856 6683905 -21221148 + AT_rich Low_complexity Low_complexity 1 49 0 4 636 180 0 0 0 chr3R 6689874 6689894 -21215159 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 636 22 0 0 0 chr3R 6690364 6690386 -21214667 + AT_rich Low_complexity Low_complexity 1 22 0 4 636 40 49 0 0 chr3R 6701476 6701537 -21203516 + AT_rich Low_complexity Low_complexity 1 61 0 4 636 29 70 0 0 chr3R 6701569 6701626 -21203427 + AT_rich Low_complexity Low_complexity 1 57 0 4 636 26 82 0 0 chr3R 6702380 6702441 -21202612 + AT_rich Low_complexity Low_complexity 1 61 0 4 636 192 40 0 0 chr3R 6713050 6713075 -21191978 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 636 222 222 0 0 chr3R 6716895 6716940 -21188113 + CT-rich Low_complexity Low_complexity 2 46 0 4 636 433 206 45 80 chr3R 6724319 6724519 -21180534 - PROTOP DNA P -429 4051 3859 4 636 23 54 0 0 chr3R 6724678 6724715 -21180338 + AT_rich Low_complexity Low_complexity 1 37 0 4 636 276 30 0 0 chr3R 6728858 6728891 -21176162 + (CATGC)n Simple_repeat Simple_repeat 1 33 0 4 636 201 171 0 0 chr3R 6729221 6729256 -21175797 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 636 225 146 0 0 chr3R 6730249 6730297 -21174756 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 636 202 56 27 27 chr3R 6730426 6730463 -21174590 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 636 303 136 0 0 chr3R 6730998 6731057 -21173996 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 636 23 33 0 0 chr3R 6732372 6732402 -21172651 + AT_rich Low_complexity Low_complexity 1 30 0 4 636 298 294 17 8 chr3R 6733358 6733478 -21171575 + (TCTCTG)n Simple_repeat Simple_repeat 4 124 0 4 636 186 43 0 0 chr3R 6739103 6739126 -21165927 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 636 261 151 0 0 chr3R 6740422 6740475 -21164578 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 636 23 33 0 0 chr3R 6742308 6742338 -21162715 + AT_rich Low_complexity Low_complexity 1 30 0 4 636 222 91 0 0 chr3R 6742819 6742852 -21162201 + (TTG)n Simple_repeat Simple_repeat 1 33 0 4 636 250 255 19 19 chr3R 6744174 6744278 -21160775 + (CA)n Simple_repeat Simple_repeat 2 105 0 4 636 23 54 0 0 chr3R 6744619 6744656 -21160397 + AT_rich Low_complexity Low_complexity 1 37 0 4 636 436 185 89 148 chr3R 6746026 6746301 -21158752 + HOBO DNA hAT 85 293 -2723 4 636 246 204 0 0 chr3R 6748681 6748730 -21156323 + GA-rich Low_complexity Low_complexity 3 51 0 4 636 180 0 0 0 chr3R 6749191 6749211 -21155842 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 636 216 143 0 0 chr3R 6752042 6752084 -21152969 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 636 21 57 0 0 chr3R 6757888 6757923 -21147130 + AT_rich Low_complexity Low_complexity 1 35 0 4 636 208 147 0 0 chr3R 6758074 6758108 -21146945 + (CAGTT)n Simple_repeat Simple_repeat 1 34 0 4 636 239 275 33 0 chr3R 6758628 6758719 -21146334 + (CTG)n Simple_repeat Simple_repeat 3 96 0 4 636 25 65 0 0 chr3R 6759482 6759528 -21145525 + AT_rich Low_complexity Low_complexity 1 46 0 4 636 265 316 0 13 chr3R 6761075 6761152 -21143901 + (ACTG)n Simple_repeat Simple_repeat 1 76 0 4 636 28 0 0 0 chr3R 6762147 6762175 -21142878 + AT_rich Low_complexity Low_complexity 1 28 0 4 636 28 0 0 0 chr3R 6766926 6766954 -21138099 + AT_rich Low_complexity Low_complexity 1 28 0 4 636 244 250 20 59 chr3R 6767510 6767612 -21137441 + (CCCCAG)n Simple_repeat Simple_repeat 4 101 0 4 636 180 0 0 0 chr3R 6770479 6770499 -21134554 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 636 21 36 0 0 chr3R 6771240 6771268 -21133785 + AT_rich Low_complexity Low_complexity 1 28 0 4 636 180 0 0 0 chr3R 6772667 6772687 -21132366 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 636 192 40 0 0 chr3R 6773855 6773880 -21131173 + (CAGG)n Simple_repeat Simple_repeat 3 27 0 4 636 279 130 0 0 chr3R 6780517 6780571 -21124482 + (T)n Simple_repeat Simple_repeat 1 54 0 4 636 218 233 0 0 chr3R 6782215 6782258 -21122795 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 636 231 36 0 0 chr3R 6783628 6783656 -21121397 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 636 47773 5 0 0 chr3R 6783750 6788972 -21116081 + DMRT1B LINE R1 1 5183 0 4 636 259 119 0 23 chr3R 6790499 6790542 -21114511 + TRANSIB2 DNA Transib 2532 2573 -271 4 636 26 30 0 0 chr3R 6793702 6793735 -21111318 + AT_rich Low_complexity Low_complexity 1 33 0 4 636 189 0 0 0 chr3R 6795106 6795127 -21109926 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 636 207 157 19 19 chr3R 6795666 6795718 -21109335 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 636 226 240 27 0 chr3R 6795766 6795841 -21109212 + (CAG)n Simple_repeat Simple_repeat 3 79 0 4 636 207 0 0 0 chr3R 6796476 6796499 -21108554 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 636 230 216 20 0 chr3R 6798154 6798205 -21106848 + (TTG)n Simple_repeat Simple_repeat 3 54 0 4 636 234 62 0 0 chr3R 6798212 6798244 -21106809 + (CATCG)n Simple_repeat Simple_repeat 5 36 0 4 636 22 0 0 0 chr3R 6800762 6800784 -21104269 + AT_rich Low_complexity Low_complexity 1 22 0 4 636 22 35 0 0 chr3R 6803215 6803244 -21101809 + AT_rich Low_complexity Low_complexity 1 29 0 4 636 21 82 0 0 chr3R 6803723 6803772 -21101281 + AT_rich Low_complexity Low_complexity 1 49 0 4 636 234 0 0 0 chr3R 6807054 6807080 -21097973 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 636 246 62 0 0 chr3R 6810951 6810983 -21094070 + (AACTG)n Simple_repeat Simple_repeat 2 33 0 4 636 186 43 0 0 chr3R 6811442 6811465 -21093588 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 636 22 0 0 0 chr3R 6811999 6812021 -21093032 + AT_rich Low_complexity Low_complexity 1 22 0 4 636 198 71 0 0 chr3R 6812524 6812552 -21092501 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 636 264 59 0 0 chr3R 6814926 6814960 -21090093 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 636 21 0 0 0 chr3R 6815165 6815186 -21089867 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 21 0 0 0 chr3R 6818748 6818769 -21086284 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 216 0 0 0 chr3R 6818806 6818830 -21086223 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 637 211 182 18 18 chr3R 6820396 6820452 -21084601 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 637 230 80 0 91 chr3R 6830411 6830466 -21074587 + A-rich Low_complexity Low_complexity 1 50 0 4 637 231 125 0 0 chr3R 6831027 6831067 -21073986 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 637 211 235 0 29 chr3R 6833455 6833525 -21071528 + (TTG)n Simple_repeat Simple_repeat 1 68 0 4 637 30 27 0 0 chr3R 6835145 6835182 -21069871 + AT_rich Low_complexity Low_complexity 1 37 0 4 637 220 209 0 0 chr3R 6837158 6837201 -21067852 + (CACCAT)n Simple_repeat Simple_repeat 4 46 0 4 637 297 75 0 0 chr3R 6838746 6838786 -21066267 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 637 23 0 0 0 chr3R 6839670 6839693 -21065360 + AT_rich Low_complexity Low_complexity 1 23 0 4 637 264 30 0 0 chr3R 6840153 6840186 -21064867 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 637 228 86 0 0 chr3R 6842119 6842154 -21062899 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 637 183 80 0 0 chr3R 6842374 6842399 -21062654 + (G)n Simple_repeat Simple_repeat 1 25 0 4 637 23 0 0 0 chr3R 6847835 6847858 -21057195 + AT_rich Low_complexity Low_complexity 1 23 0 4 637 25 31 0 0 chr3R 6848740 6848772 -21056281 + AT_rich Low_complexity Low_complexity 1 32 0 4 637 234 0 0 0 chr3R 6850328 6850354 -21054699 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 637 23 33 0 0 chr3R 6851995 6852025 -21053028 + AT_rich Low_complexity Low_complexity 1 30 0 4 637 206 265 0 0 chr3R 6862829 6862878 -21042175 + T-rich Low_complexity Low_complexity 1 49 0 4 637 219 231 0 0 chr3R 6863286 6863338 -21041715 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 637 246 105 0 0 chr3R 6863647 6863685 -21041368 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 637 220 186 0 0 chr3R 6871607 6871650 -21033403 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 637 22 56 0 0 chr3R 6872750 6872786 -21032267 + AT_rich Low_complexity Low_complexity 1 36 0 4 637 225 0 0 0 chr3R 6873147 6873172 -21031881 + (CAG)n Simple_repeat Simple_repeat 3 27 0 4 637 222 37 0 0 chr3R 6873642 6873669 -21031384 + (CAG)n Simple_repeat Simple_repeat 3 29 0 4 637 213 94 0 0 chr3R 6873709 6873741 -21031312 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 637 22 0 0 0 chr3R 6874279 6874301 -21030752 + AT_rich Low_complexity Low_complexity 1 22 0 4 637 21 0 0 0 chr3R 6874470 6874491 -21030562 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 216 122 0 0 chr3R 6874901 6874942 -21030111 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 637 207 200 0 0 chr3R 6875494 6875539 -21029514 + A-rich Low_complexity Low_complexity 1 45 0 4 637 204 40 0 0 chr3R 6879858 6879883 -21025170 + (TGG)n Simple_repeat Simple_repeat 2 26 0 4 637 27 0 0 0 chr3R 6880406 6880433 -21024620 + AT_rich Low_complexity Low_complexity 1 27 0 4 637 399 113 0 0 chr3R 6881243 6881314 -21023739 + (GATTG)n Simple_repeat Simple_repeat 5 75 0 4 637 38 68 0 0 chr3R 6885985 6886058 -21018995 + AT_rich Low_complexity Low_complexity 1 73 0 4 637 183 162 0 0 chr3R 6887192 6887229 -21017824 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 4 637 198 0 0 0 chr3R 6889120 6889142 -21015911 + (CGAAA)n Simple_repeat Simple_repeat 4 25 0 4 637 22 0 0 0 chr3R 6891339 6891361 -21013692 + AT_rich Low_complexity Low_complexity 1 22 0 4 637 3368 5 7 7 chr3R 6891361 6891775 -21013278 - DM297_LTR LTR Gypsy 0 414 1 4 637 6267 9 0 1 chr3R 6891775 6892571 -21012482 - DM297_I LTR Gypsy 0 6167 5373 4 637 33278 7 0 1 chr3R 6892542 6896548 -21008505 - DM297_I LTR Gypsy -2165 4002 1 4 637 3368 5 7 7 chr3R 6896548 6896962 -21008091 - DM297_LTR LTR Gypsy 0 414 1 4 637 279 0 0 0 chr3R 6897160 6897191 -21007862 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 637 210 128 0 0 chr3R 6901401 6901440 -21003613 + (A)n Simple_repeat Simple_repeat 1 39 0 4 637 22 35 0 0 chr3R 6907636 6907665 -20997388 + AT_rich Low_complexity Low_complexity 1 29 0 4 637 189 121 0 0 chr3R 6909778 6909811 -20995242 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 637 21 0 0 0 chr3R 6914413 6914434 -20990619 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 21 36 0 0 chr3R 6915510 6915538 -20989515 + AT_rich Low_complexity Low_complexity 1 28 0 4 637 180 97 0 0 chr3R 6919187 6919218 -20985835 + (A)n Simple_repeat Simple_repeat 1 31 0 4 637 25 31 0 0 chr3R 6923648 6923680 -20981373 + AT_rich Low_complexity Low_complexity 1 32 0 4 637 35 0 0 0 chr3R 6924239 6924274 -20980779 + AT_rich Low_complexity Low_complexity 1 35 0 4 637 25 31 0 0 chr3R 6925411 6925443 -20979610 + AT_rich Low_complexity Low_complexity 1 32 0 4 637 34 72 0 0 chr3R 6926211 6926280 -20978773 + AT_rich Low_complexity Low_complexity 1 69 0 4 637 321 366 6 0 chr3R 6926889 6927064 -20977989 + (CAA)n Simple_repeat Simple_repeat 2 177 0 4 637 336 305 0 0 chr3R 6926965 6927060 -20977993 + (CAG)n Simple_repeat Simple_repeat 1 95 0 4 637 195 189 0 0 chr3R 6928205 6928258 -20976795 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 637 22 0 0 0 chr3R 6930534 6930556 -20974497 + AT_rich Low_complexity Low_complexity 1 22 0 4 637 209 179 0 0 chr3R 6931968 6932007 -20973046 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 637 249 33 0 0 chr3R 6932706 6932736 -20972317 + (CAG)n Simple_repeat Simple_repeat 3 32 0 4 637 35 95 0 0 chr3R 6933205 6933310 -20971743 + AT_rich Low_complexity Low_complexity 1 105 0 4 637 204 190 17 17 chr3R 6933571 6933630 -20971423 + (TTA)n Simple_repeat Simple_repeat 2 60 0 4 637 26 50 0 0 chr3R 6935656 6935696 -20969357 + AT_rich Low_complexity Low_complexity 1 40 0 4 637 21 0 0 0 chr3R 6935862 6935883 -20969170 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 217 231 0 0 chr3R 6936035 6936087 -20968966 + GA-rich Low_complexity Low_complexity 2 53 0 4 637 219 245 0 0 chr3R 6936216 6936269 -20968784 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 637 231 61 0 0 chr3R 6936335 6936368 -20968685 + (GCTG)n Simple_repeat Simple_repeat 2 34 0 4 637 195 42 0 0 chr3R 6936620 6936644 -20968409 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 637 21 82 0 0 chr3R 6937473 6937522 -20967531 + AT_rich Low_complexity Low_complexity 1 49 0 4 637 212 147 0 0 chr3R 6941570 6941604 -20963449 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 4 637 195 42 0 0 chr3R 6942227 6942251 -20962802 + (CAAT)n Simple_repeat Simple_repeat 3 26 0 4 637 201 39 0 0 chr3R 6944031 6944057 -20960996 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 637 207 0 0 0 chr3R 6944165 6944188 -20960865 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 637 21 57 0 0 chr3R 6944655 6944690 -20960363 + AT_rich Low_complexity Low_complexity 1 35 0 4 637 26 82 0 0 chr3R 6945509 6945570 -20959483 + AT_rich Low_complexity Low_complexity 1 61 0 4 638 231 173 0 0 chr3R 6947608 6947660 -20957393 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 638 35 0 0 0 chr3R 6948551 6948586 -20956467 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 225 119 0 0 chr3R 6955005 6955047 -20950006 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 638 22 35 0 0 chr3R 6955976 6956005 -20949048 + AT_rich Low_complexity Low_complexity 1 29 0 4 638 24 53 0 0 chr3R 6961138 6961176 -20943877 + AT_rich Low_complexity Low_complexity 1 38 0 4 638 261 0 0 0 chr3R 6962131 6962160 -20942893 + (CAG)n Simple_repeat Simple_repeat 2 30 0 4 638 222 37 0 0 chr3R 6965915 6965942 -20939111 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 638 23 0 0 0 chr3R 6967505 6967528 -20937525 + AT_rich Low_complexity Low_complexity 1 23 0 4 638 21 36 0 0 chr3R 6972187 6972215 -20932838 + AT_rich Low_complexity Low_complexity 1 28 0 4 638 23 0 0 0 chr3R 6972324 6972347 -20932706 + AT_rich Low_complexity Low_complexity 1 23 0 4 638 27 0 0 0 chr3R 6974132 6974159 -20930894 + AT_rich Low_complexity Low_complexity 1 27 0 4 638 240 35 0 0 chr3R 6974353 6974382 -20930671 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 638 23 0 0 0 chr3R 6974538 6974561 -20930492 + AT_rich Low_complexity Low_complexity 1 23 0 4 638 219 204 0 0 chr3R 6975387 6975436 -20929617 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 4 638 22 56 0 0 chr3R 6976717 6976753 -20928300 + AT_rich Low_complexity Low_complexity 1 36 0 4 638 21 57 0 0 chr3R 6979792 6979827 -20925226 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 29 47 0 0 chr3R 6980142 6980185 -20924868 + AT_rich Low_complexity Low_complexity 1 43 0 4 638 22 0 0 0 chr3R 6982235 6982257 -20922796 + AT_rich Low_complexity Low_complexity 1 22 0 4 638 201 206 14 42 chr3R 6990048 6990119 -20914934 + (TTTA)n Simple_repeat Simple_repeat 3 71 0 4 638 36 23 0 0 chr3R 6996519 6996562 -20908491 + AT_rich Low_complexity Low_complexity 1 43 0 4 638 456 51 0 0 chr3R 6998564 6998623 -20906430 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 638 24 0 0 0 chr3R 7001834 7001858 -20903195 + AT_rich Low_complexity Low_complexity 1 24 0 4 638 213 280 0 26 chr3R 7003902 7003979 -20901074 + A-rich Low_complexity Low_complexity 4 78 0 4 638 234 81 0 0 chr3R 7005073 7005110 -20899943 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 638 35 0 0 0 chr3R 7005652 7005687 -20899366 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 207 139 0 0 chr3R 7009414 7009450 -20895603 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 638 28 29 0 0 chr3R 7009692 7009727 -20895326 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 231 36 0 0 chr3R 7009966 7009994 -20895059 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 4 638 204 97 0 0 chr3R 7012086 7012117 -20892936 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 638 219 69 0 0 chr3R 7012997 7013026 -20892027 + (ATG)n Simple_repeat Simple_repeat 3 31 0 4 638 216 191 0 0 chr3R 7015121 7015168 -20889885 + T-rich Low_complexity Low_complexity 1 47 0 4 638 300 102 0 0 chr3R 7018372 7018421 -20886632 + (A)n Simple_repeat Simple_repeat 1 49 0 4 638 21 57 0 0 chr3R 7019336 7019371 -20885682 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 23 54 0 0 chr3R 7022964 7023001 -20882052 + AT_rich Low_complexity Low_complexity 1 37 0 4 638 21 0 0 0 chr3R 7026634 7026655 -20878398 + AT_rich Low_complexity Low_complexity 1 21 0 4 638 28 0 0 0 chr3R 7027367 7027395 -20877658 + AT_rich Low_complexity Low_complexity 1 28 0 4 638 27 49 0 0 chr3R 7027598 7027639 -20877414 + AT_rich Low_complexity Low_complexity 1 41 0 4 638 24 32 0 0 chr3R 7027662 7027693 -20877360 + AT_rich Low_complexity Low_complexity 1 31 0 4 638 309 118 0 0 chr3R 7029665 7029716 -20875337 + (CAA)n Simple_repeat Simple_repeat 1 51 0 4 638 213 200 0 0 chr3R 7030886 7030926 -20874127 + (CAGC)n Simple_repeat Simple_repeat 2 41 0 4 638 25 31 0 0 chr3R 7038199 7038231 -20866822 + AT_rich Low_complexity Low_complexity 1 32 0 4 638 27 29 0 0 chr3R 7040669 7040703 -20864350 + AT_rich Low_complexity Low_complexity 1 34 0 4 638 238 238 0 0 chr3R 7050521 7050563 -20854490 + (CCG)n Simple_repeat Simple_repeat 2 43 0 4 638 24 91 0 0 chr3R 7056373 7056439 -20848614 + AT_rich Low_complexity Low_complexity 1 66 0 4 638 34 24 0 0 chr3R 7058154 7058195 -20846858 + AT_rich Low_complexity Low_complexity 1 41 0 4 638 214 354 0 0 chr3R 7060272 7060371 -20844682 + (CCG)n Simple_repeat Simple_repeat 2 100 0 4 638 296 114 0 0 chr3R 7060948 7060992 -20844061 - DNAREP1_DM LINE Penelope -105 489 446 4 638 27 29 0 0 chr3R 7061865 7061899 -20843154 + AT_rich Low_complexity Low_complexity 1 34 0 4 638 22 0 0 0 chr3R 7064509 7064531 -20840522 + AT_rich Low_complexity Low_complexity 1 22 0 4 638 206 236 0 0 chr3R 7071132 7071187 -20833866 + (CCA)n Simple_repeat Simple_repeat 2 56 0 4 638 302 163 11 0 chr3R 7072951 7073018 -20832035 + DNAREP1_DM LINE Penelope 443 489 -105 4 638 203 158 0 0 chr3R 7074400 7074438 -20830615 + CT-rich Low_complexity Low_complexity 2 39 0 4 638 423 155 0 0 chr3R 7074926 7075010 -20830043 + (TTGG)n Simple_repeat Simple_repeat 3 86 0 4 638 333 0 0 0 chr3R 7075686 7075723 -20829330 + (GACTG)n Simple_repeat Simple_repeat 1 37 0 4 638 205 195 0 0 chr3R 7075799 7075840 -20829213 + T-rich Low_complexity Low_complexity 4 44 0 4 638 21 89 0 0 chr3R 7076711 7076767 -20828286 + AT_rich Low_complexity Low_complexity 1 56 0 4 638 41 21 0 0 chr3R 7077710 7077758 -20827295 + AT_rich Low_complexity Low_complexity 1 48 0 4 639 21 36 0 0 chr3R 7078536 7078564 -20826489 + AT_rich Low_complexity Low_complexity 1 28 0 4 639 24 0 0 0 chr3R 7078705 7078729 -20826324 + AT_rich Low_complexity Low_complexity 1 24 0 4 639 23 33 0 0 chr3R 7078805 7078835 -20826218 + AT_rich Low_complexity Low_complexity 1 30 0 4 639 252 77 0 0 chr3R 7079710 7079749 -20825304 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 639 186 71 0 0 chr3R 7080344 7080372 -20824681 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 639 230 152 17 0 chr3R 7081757 7081816 -20823237 + (CTG)n Simple_repeat Simple_repeat 1 60 0 4 639 228 154 0 0 chr3R 7083383 7083435 -20821618 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 639 243 140 0 0 chr3R 7083730 7083780 -20821273 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 639 192 40 0 0 chr3R 7084290 7084315 -20820738 + (TTTTTA)n Simple_repeat Simple_repeat 6 30 0 4 639 33 43 0 0 chr3R 7084396 7084443 -20820610 + AT_rich Low_complexity Low_complexity 1 47 0 4 639 22 56 0 0 chr3R 7085366 7085402 -20819651 + AT_rich Low_complexity Low_complexity 1 36 0 4 639 22 0 0 0 chr3R 7085985 7086007 -20819046 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 203 0 37 0 chr3R 7086811 7086838 -20818215 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 639 218 116 23 0 chr3R 7086904 7086947 -20818106 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 639 33 56 0 0 chr3R 7089114 7089168 -20815885 + AT_rich Low_complexity Low_complexity 1 54 0 4 639 231 88 0 0 chr3R 7089937 7089971 -20815082 + (CAA)n Simple_repeat Simple_repeat 3 36 0 4 639 24 32 0 0 chr3R 7090714 7090745 -20814308 + AT_rich Low_complexity Low_complexity 1 31 0 4 639 22 35 0 0 chr3R 7092284 7092313 -20812740 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 22 0 0 0 chr3R 7093002 7093024 -20812029 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 28 61 0 0 chr3R 7094715 7094764 -20810289 + AT_rich Low_complexity Low_complexity 1 49 0 4 639 35 54 0 0 chr3R 7095107 7095163 -20809890 + AT_rich Low_complexity Low_complexity 1 56 0 4 639 183 42 0 0 chr3R 7095715 7095739 -20809314 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 4 639 216 0 0 0 chr3R 7096454 7096478 -20808575 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 639 24 0 0 0 chr3R 7097375 7097399 -20807654 + AT_rich Low_complexity Low_complexity 1 24 0 4 639 228 135 0 0 chr3R 7097605 7097642 -20807411 + (ATG)n Simple_repeat Simple_repeat 1 37 0 4 639 215 236 0 0 chr3R 7100508 7100563 -20804490 + T-rich Low_complexity Low_complexity 1 55 0 4 639 210 191 0 0 chr3R 7100616 7100658 -20804395 + (TTG)n Simple_repeat Simple_repeat 1 42 0 4 639 189 0 0 0 chr3R 7101634 7101655 -20803398 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 639 210 300 0 0 chr3R 7101852 7101902 -20803151 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 639 25 0 0 0 chr3R 7102212 7102237 -20802816 + AT_rich Low_complexity Low_complexity 1 25 0 4 639 192 152 0 0 chr3R 7102345 7102378 -20802675 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 639 23 33 0 0 chr3R 7106998 7107028 -20798025 + AT_rich Low_complexity Low_complexity 1 30 0 4 639 29 0 0 0 chr3R 7107198 7107227 -20797826 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 246 220 0 0 chr3R 7107652 7107711 -20797342 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 639 212 218 0 35 chr3R 7107865 7107922 -20797131 + (CAG)n Simple_repeat Simple_repeat 2 56 0 4 639 204 40 0 0 chr3R 7107987 7108012 -20797041 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 639 21 0 0 0 chr3R 7109290 7109311 -20795742 + AT_rich Low_complexity Low_complexity 1 21 0 4 639 27 29 0 0 chr3R 7109492 7109526 -20795527 + AT_rich Low_complexity Low_complexity 1 34 0 4 639 36 70 0 0 chr3R 7112571 7112642 -20792411 + AT_rich Low_complexity Low_complexity 1 71 0 4 639 195 42 0 0 chr3R 7118975 7118999 -20786054 + (GAGTG)n Simple_repeat Simple_repeat 3 26 0 4 639 21 0 0 0 chr3R 7120416 7120437 -20784616 + AT_rich Low_complexity Low_complexity 1 21 0 4 639 21 0 0 0 chr3R 7121889 7121910 -20783143 + AT_rich Low_complexity Low_complexity 1 21 0 4 639 300 53 0 0 chr3R 7124421 7124459 -20780594 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 639 232 314 0 0 chr3R 7124539 7124609 -20780444 + C-rich Low_complexity Low_complexity 5 74 0 4 639 219 69 0 0 chr3R 7124813 7124842 -20780211 + (TCG)n Simple_repeat Simple_repeat 1 29 0 4 639 231 161 0 0 chr3R 7126602 7126658 -20778395 + (TTGG)n Simple_repeat Simple_repeat 3 58 0 4 639 201 138 0 0 chr3R 7126883 7126912 -20778141 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 639 22 0 0 0 chr3R 7128084 7128106 -20776947 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 225 143 212 45 chr3R 7128979 7129045 -20776008 + TABOR_LTR LTR Gypsy 273 349 -157 4 639 228 100 0 0 chr3R 7131023 7131063 -20773990 + (GTCTG)n Simple_repeat Simple_repeat 5 44 0 4 639 26 50 0 0 chr3R 7132479 7132519 -20772534 + AT_rich Low_complexity Low_complexity 1 40 0 4 639 25 65 0 0 chr3R 7136942 7136988 -20768065 + AT_rich Low_complexity Low_complexity 1 46 0 4 639 935 188 0 5 chr3R 7138489 7138687 -20766366 + XDMR Unknown Unknown 146 342 -19 4 639 201 154 0 0 chr3R 7139437 7139476 -20765577 + A-rich Low_complexity Low_complexity 1 39 0 4 639 22 0 0 0 chr3R 7142245 7142267 -20762786 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 360 88 0 0 chr3R 7142555 7142612 -20762441 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 4 639 198 0 0 0 chr3R 7143949 7143971 -20761082 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 639 23 0 0 0 chr3R 7145359 7145382 -20759671 + AT_rich Low_complexity Low_complexity 1 23 0 4 639 192 77 0 0 chr3R 7145995 7146021 -20759032 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 4 639 31 0 0 0 chr3R 7147775 7147806 -20757247 + AT_rich Low_complexity Low_complexity 1 31 0 4 639 23 0 0 0 chr3R 7147932 7147955 -20757098 + AT_rich Low_complexity Low_complexity 1 23 0 4 639 29 0 0 0 chr3R 7149261 7149290 -20755763 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 189 74 0 0 chr3R 7151131 7151158 -20753895 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 639 183 42 0 0 chr3R 7151333 7151357 -20753696 + (CAG)n Simple_repeat Simple_repeat 3 26 0 4 639 213 108 0 0 chr3R 7152294 7152331 -20752722 + (CAAAC)n Simple_repeat Simple_repeat 3 39 0 4 639 329 131 16 0 chr3R 7152598 7152659 -20752394 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 639 200 216 20 0 chr3R 7153749 7153800 -20751253 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 639 197 33 33 0 chr3R 7154324 7154354 -20750699 + (CAGG)n Simple_repeat Simple_repeat 2 32 0 4 639 210 256 0 49 chr3R 7154461 7154543 -20750510 + A-rich Low_complexity Low_complexity 2 79 0 4 639 240 207 0 0 chr3R 7155512 7155570 -20749483 + A-rich Low_complexity Low_complexity 1 58 0 4 639 243 177 0 0 chr3R 7156860 7156922 -20748131 + GA-rich Low_complexity Low_complexity 2 63 0 4 639 192 158 0 0 chr3R 7157330 7157368 -20747685 + (ATG)n Simple_repeat Simple_repeat 3 40 0 4 639 213 65 0 0 chr3R 7157963 7157994 -20747059 + (CAACG)n Simple_repeat Simple_repeat 2 32 0 4 639 206 115 48 16 chr3R 7158293 7158355 -20746698 + (TA)n Simple_repeat Simple_repeat 1 64 0 4 639 258 148 0 0 chr3R 7158488 7158542 -20746511 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 639 213 180 0 0 chr3R 7158562 7158612 -20746441 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 639 246 81 0 0 chr3R 7160465 7160502 -20744551 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 639 223 233 27 0 chr3R 7160706 7160779 -20744274 + A-rich Low_complexity Low_complexity 2 76 0 4 639 186 103 0 0 chr3R 7161416 7161445 -20743608 + (GA)n Simple_repeat Simple_repeat 2 30 0 4 639 26 0 0 0 chr3R 7162036 7162062 -20742991 + AT_rich Low_complexity Low_complexity 1 26 0 4 639 198 167 0 0 chr3R 7162218 7162254 -20742799 + (CAG)n Simple_repeat Simple_repeat 2 37 0 4 639 36 0 0 0 chr3R 7162468 7162504 -20742549 + AT_rich Low_complexity Low_complexity 1 36 0 4 639 180 97 0 0 chr3R 7162505 7162536 -20742517 + (A)n Simple_repeat Simple_repeat 1 31 0 4 639 185 0 23 91 chr3R 7162624 7162668 -20742385 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 4 639 26 64 0 0 chr3R 7163695 7163742 -20741311 + AT_rich Low_complexity Low_complexity 1 47 0 4 639 27 0 0 0 chr3R 7163919 7163946 -20741107 + AT_rich Low_complexity Low_complexity 1 27 0 4 639 220 204 0 0 chr3R 7164741 7164795 -20740258 + A-rich Low_complexity Low_complexity 1 54 0 4 639 26 30 0 0 chr3R 7164927 7164960 -20740093 + AT_rich Low_complexity Low_complexity 1 33 0 4 639 22 35 0 0 chr3R 7165056 7165085 -20739968 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 25 31 0 0 chr3R 7165156 7165188 -20739865 + AT_rich Low_complexity Low_complexity 1 32 0 4 639 198 0 0 0 chr3R 7165533 7165555 -20739498 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 639 279 0 0 0 chr3R 7165997 7166028 -20739025 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 639 201 244 0 0 chr3R 7166374 7166415 -20738638 + (CCTG)n Simple_repeat Simple_repeat 4 44 0 4 639 24 0 0 0 chr3R 7171950 7171974 -20733079 + AT_rich Low_complexity Low_complexity 1 24 0 4 639 222 37 0 0 chr3R 7177692 7177719 -20727334 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 639 183 184 0 0 chr3R 7181101 7181139 -20723914 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 4 639 180 97 0 0 chr3R 7183635 7183666 -20721387 + (T)n Simple_repeat Simple_repeat 1 31 0 4 639 27 0 0 0 chr3R 7184009 7184036 -20721017 + AT_rich Low_complexity Low_complexity 1 27 0 4 639 273 128 0 0 chr3R 7184539 7184586 -20720467 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 639 210 71 0 0 chr3R 7185327 7185355 -20719698 + (G)n Simple_repeat Simple_repeat 1 28 0 4 639 207 0 0 0 chr3R 7191329 7191352 -20713701 + (A)n Simple_repeat Simple_repeat 1 23 0 4 639 198 136 0 0 chr3R 7194352 7194396 -20710657 + (TCC)n Simple_repeat Simple_repeat 1 44 0 4 639 198 136 0 0 chr3R 7196687 7196731 -20708322 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 639 283 224 0 0 chr3R 7198013 7198098 -20706955 + ROO_I LTR Pao 650 734 -7522 4 639 207 255 0 0 chr3R 7198244 7198295 -20706758 + GA-rich Low_complexity Low_complexity 2 52 0 4 639 312 120 0 0 chr3R 7198351 7198401 -20706652 + (CAG)n Simple_repeat Simple_repeat 1 50 0 4 639 210 71 0 0 chr3R 7198418 7198446 -20706607 + (CGA)n Simple_repeat Simple_repeat 3 30 0 4 639 357 200 52 10 chr3R 7198706 7198802 -20706251 + ROO_I LTR Pao 645 744 -7512 4 639 225 167 0 0 chr3R 7199566 7199608 -20705445 + (CAG)n Simple_repeat Simple_repeat 3 44 0 4 639 221 319 11 0 chr3R 7199749 7199840 -20705213 + (CAG)n Simple_repeat Simple_repeat 3 94 0 4 639 234 198 0 62 chr3R 7200962 7201059 -20703994 + ROO_I LTR Pao 641 731 -7525 4 639 232 215 38 0 chr3R 7201062 7201141 -20703912 + ROO_I LTR Pao 648 729 -7527 4 639 311 148 15 62 chr3R 7201630 7201760 -20703293 + (CAG)n Simple_repeat Simple_repeat 3 126 0 4 639 292 149 33 33 chr3R 7202147 7202237 -20702816 + (CAG)n Simple_repeat Simple_repeat 1 90 0 4 639 414 100 0 0 chr3R 7202378 7202438 -20702615 + (CAG)n Simple_repeat Simple_repeat 1 60 0 4 639 219 36 0 0 chr3R 7203035 7203063 -20701990 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 639 189 0 0 0 chr3R 7204846 7204867 -20700186 + (T)n Simple_repeat Simple_repeat 1 21 0 4 639 3968 5 0 0 chr3R 7205012 7205440 -20699613 - ROO_LTR LTR Pao 0 428 1 4 79 73712 2 3 2 chr3R 7205440 7213680 -20691373 - ROO_I LTR Pao 0 8256 1 4 640 3938 5 0 2 chr3R 7213680 7214109 -20690944 - ROO_LTR LTR Pao 0 428 1 4 640 303 104 0 0 chr3R 7215056 7215104 -20689949 + (CAA)n Simple_repeat Simple_repeat 3 50 0 4 640 266 197 28 0 chr3R 7215418 7215489 -20689564 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 640 183 42 0 0 chr3R 7215620 7215644 -20689409 + (TC)n Simple_repeat Simple_repeat 2 25 0 4 640 207 0 0 0 chr3R 7216444 7216467 -20688586 + (CAG)n Simple_repeat Simple_repeat 2 24 0 4 640 195 139 0 0 chr3R 7216610 7216646 -20688407 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 640 186 103 0 0 chr3R 7216993 7217022 -20688031 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 640 200 200 0 0 chr3R 7217889 7217934 -20687119 + (CCA)n Simple_repeat Simple_repeat 1 45 0 4 640 216 0 0 0 chr3R 7218644 7218668 -20686385 + (GA)n Simple_repeat Simple_repeat 1 24 0 4 640 180 228 0 0 chr3R 7219715 7219772 -20685281 + (CAGT)n Simple_repeat Simple_repeat 4 60 0 4 640 252 59 0 0 chr3R 7221211 7221245 -20683808 + (CCAA)n Simple_repeat Simple_repeat 4 37 0 4 640 230 81 0 26 chr3R 7223923 7223961 -20681092 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 4 640 216 97 0 0 chr3R 7224600 7224631 -20680422 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 640 221 191 29 29 chr3R 7226716 7226786 -20678267 + A-rich Low_complexity Low_complexity 5 74 0 4 640 219 225 11 53 chr3R 7227384 7227478 -20677575 + (CAA)n Simple_repeat Simple_repeat 1 90 0 4 640 236 264 0 0 chr3R 7228617 7228689 -20676364 + A-rich Low_complexity Low_complexity 1 72 0 4 640 22 0 0 0 chr3R 7229043 7229065 -20675988 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 208 238 0 31 chr3R 7232510 7232575 -20672478 + (CAAAG)n Simple_repeat Simple_repeat 2 64 0 4 640 188 34 0 33 chr3R 7233013 7233043 -20672010 + (CACAC)n Simple_repeat Simple_repeat 2 30 0 4 640 28 70 0 34 chr3R 7235650 7235739 -20669314 + AT_rich Low_complexity Low_complexity 1 86 0 4 640 22 56 0 0 chr3R 7238135 7238171 -20666882 + AT_rich Low_complexity Low_complexity 1 36 0 4 640 22 70 0 0 chr3R 7247583 7247626 -20657427 + AT_rich Low_complexity Low_complexity 1 43 0 4 640 229 145 69 42 chr3R 7255614 7255686 -20649367 + (TTATA)n Simple_repeat Simple_repeat 3 76 0 4 640 30 45 0 0 chr3R 7259196 7259240 -20645813 + AT_rich Low_complexity Low_complexity 1 44 0 4 640 26 64 0 0 chr3R 7263310 7263357 -20641696 + AT_rich Low_complexity Low_complexity 1 47 0 4 640 256 277 0 0 chr3R 7263937 7264020 -20641033 + CT-rich Low_complexity Low_complexity 2 84 0 4 640 217 224 17 0 chr3R 7266907 7266965 -20638088 + (CGG)n Simple_repeat Simple_repeat 2 60 0 4 640 25 0 0 0 chr3R 7267120 7267145 -20637908 + AT_rich Low_complexity Low_complexity 1 25 0 4 640 261 57 0 0 chr3R 7268007 7268042 -20637011 + (CACCAT)n Simple_repeat Simple_repeat 1 35 0 4 640 31 58 0 0 chr3R 7269838 7269890 -20635163 + AT_rich Low_complexity Low_complexity 1 52 0 4 640 27 29 0 0 chr3R 7271726 7271760 -20633293 + AT_rich Low_complexity Low_complexity 1 34 0 4 640 46 19 0 0 chr3R 7272317 7272370 -20632683 + AT_rich Low_complexity Low_complexity 1 53 0 4 640 338 318 0 0 chr3R 7273295 7273405 -20631648 + CT-rich Low_complexity Low_complexity 2 111 0 4 640 180 77 0 0 chr3R 7276680 7276706 -20628347 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 640 21 0 0 0 chr3R 7278123 7278144 -20626909 + AT_rich Low_complexity Low_complexity 1 21 0 4 640 22 0 0 0 chr3R 7280381 7280403 -20624650 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 201 300 0 0 chr3R 7282429 7282509 -20622544 + A-rich Low_complexity Low_complexity 1 80 0 4 640 183 80 0 0 chr3R 7283072 7283097 -20621956 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 4 640 226 136 46 119 chr3R 7283335 7283444 -20621609 - ROO_I LTR Pao -7515 741 641 4 640 384 94 11 56 chr3R 7283506 7283596 -20621457 + (TTTG)n Simple_repeat Simple_repeat 1 86 0 4 640 227 232 0 12 chr3R 7283797 7283880 -20621173 + (CTG)n Simple_repeat Simple_repeat 3 84 0 4 640 192 231 0 0 chr3R 7284014 7284066 -20620987 + (CTG)n Simple_repeat Simple_repeat 1 52 0 4 640 201 121 0 0 chr3R 7288168 7288201 -20616852 + (AACTG)n Simple_repeat Simple_repeat 3 35 0 4 640 240 154 0 0 chr3R 7293702 7293754 -20611299 + (CAGT)n Simple_repeat Simple_repeat 4 55 0 4 640 243 210 0 100 chr3R 7295217 7295307 -20609746 + ROO_I LTR Pao 654 734 -7522 4 640 22 0 0 0 chr3R 7296412 7296434 -20608619 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 218 211 17 17 chr3R 7297006 7297064 -20607989 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 640 228 163 0 0 chr3R 7297224 7297267 -20607786 + (CACCAT)n Simple_repeat Simple_repeat 6 48 0 4 640 232 228 0 0 chr3R 7297742 7297799 -20607254 + GA-rich Low_complexity Low_complexity 3 59 0 4 640 249 98 0 0 chr3R 7300205 7300246 -20604807 + (CAG)n Simple_repeat Simple_repeat 3 43 0 4 640 225 65 0 0 chr3R 7301597 7301628 -20603425 + (GCTG)n Simple_repeat Simple_repeat 4 34 0 4 640 213 163 0 0 chr3R 7302350 7302399 -20602654 + (CTGTG)n Simple_repeat Simple_repeat 2 50 0 4 640 235 0 57 0 chr3R 7302738 7302773 -20602280 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 640 248 203 26 26 chr3R 7306496 7306572 -20598481 + (CACCAT)n Simple_repeat Simple_repeat 4 79 0 4 640 186 43 0 0 chr3R 7308862 7308885 -20596168 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 640 229 273 0 0 chr3R 7309409 7309464 -20595589 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 640 24 0 0 0 chr3R 7311748 7311772 -20593281 + AT_rich Low_complexity Low_complexity 1 24 0 4 640 186 191 0 0 chr3R 7312220 7312267 -20592786 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 640 288 127 0 0 chr3R 7315541 7315596 -20589457 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 640 26 0 0 0 chr3R 7316230 7316256 -20588797 + AT_rich Low_complexity Low_complexity 1 26 0 4 640 311 78 20 0 chr3R 7318892 7318943 -20586110 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 640 24 0 0 0 chr3R 7319994 7320018 -20585035 + AT_rich Low_complexity Low_complexity 1 24 0 4 640 31 0 0 0 chr3R 7320435 7320466 -20584587 + AT_rich Low_complexity Low_complexity 1 31 0 4 640 22 0 0 0 chr3R 7321918 7321940 -20583113 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 209 160 40 0 chr3R 7321965 7322015 -20583038 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 640 215 121 0 83 chr3R 7322932 7323004 -20582049 + (CATCC)n Simple_repeat Simple_repeat 3 68 0 4 640 218 255 21 0 chr3R 7323113 7323160 -20581893 + (CTG)n Simple_repeat Simple_repeat 1 48 0 4 640 183 80 0 0 chr3R 7325122 7325147 -20579906 + (CAG)n Simple_repeat Simple_repeat 2 26 0 4 640 180 214 0 0 chr3R 7326684 7326740 -20578313 + (CGAGT)n Simple_repeat Simple_repeat 5 60 0 4 640 297 244 0 0 chr3R 7328752 7328838 -20576215 + (TCTG)n Simple_repeat Simple_repeat 3 88 0 4 640 225 83 0 0 chr3R 7332803 7332839 -20572214 + (CTG)n Simple_repeat Simple_repeat 3 38 0 4 640 243 61 0 0 chr3R 7333752 7333785 -20571268 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 640 22 0 0 0 chr3R 7335569 7335591 -20569462 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 234 0 0 0 chr3R 7337043 7337069 -20567984 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 640 231 173 0 0 chr3R 7337864 7337916 -20567137 + (CTG)n Simple_repeat Simple_repeat 2 53 0 4 640 335 105 0 17 chr3R 7338186 7338244 -20566809 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 641 253 125 0 20 chr3R 7341508 7341557 -20563496 + ROO_I LTR Pao 704 751 -7505 4 641 222 116 0 0 chr3R 7343754 7343797 -20561256 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 641 200 195 0 0 chr3R 7344001 7344042 -20561011 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 641 226 274 0 0 chr3R 7345085 7345136 -20559917 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 641 198 71 0 0 chr3R 7350280 7350308 -20554745 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 641 186 171 0 0 chr3R 7350391 7350432 -20554621 + CT-rich Low_complexity Low_complexity 4 44 0 4 641 216 167 0 0 chr3R 7351921 7351969 -20553084 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 641 23 0 0 0 chr3R 7352634 7352657 -20552396 + AT_rich Low_complexity Low_complexity 1 23 0 4 641 26 0 0 0 chr3R 7354791 7354817 -20550236 + AT_rich Low_complexity Low_complexity 1 26 0 4 641 208 196 0 38 chr3R 7355553 7355606 -20549447 + (CCCA)n Simple_repeat Simple_repeat 3 53 0 4 641 186 71 0 0 chr3R 7356083 7356111 -20548942 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 641 315 71 0 0 chr3R 7356796 7356838 -20548215 + (TTG)n Simple_repeat Simple_repeat 1 42 0 4 641 219 88 0 0 chr3R 7357940 7357974 -20547079 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 641 195 69 0 0 chr3R 7358118 7358147 -20546906 + (TTC)n Simple_repeat Simple_repeat 1 29 0 4 641 219 219 0 0 chr3R 7358207 7358248 -20546805 + (GCTG)n Simple_repeat Simple_repeat 3 43 0 4 641 237 169 41 27 chr3R 7358734 7358807 -20546246 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 641 270 56 0 0 chr3R 7359566 7359602 -20545451 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 641 195 100 0 0 chr3R 7360019 7360049 -20545004 + (CCTG)n Simple_repeat Simple_repeat 2 31 0 4 641 27 0 0 0 chr3R 7363239 7363266 -20541787 + AT_rich Low_complexity Low_complexity 1 27 0 4 641 26 0 0 0 chr3R 7366493 7366519 -20538534 + AT_rich Low_complexity Low_complexity 1 26 0 4 641 276 77 0 0 chr3R 7369009 7369048 -20536005 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 641 225 65 0 0 chr3R 7370113 7370144 -20534909 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 641 195 69 0 0 chr3R 7373943 7373972 -20531081 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 641 22 0 0 0 chr3R 7374383 7374405 -20530648 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 227 143 41 0 chr3R 7375386 7375435 -20529618 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 641 341 43 21 0 chr3R 7375564 7375611 -20529442 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 641 296 269 0 0 chr3R 7376058 7376151 -20528902 + (CTG)n Simple_repeat Simple_repeat 1 93 0 4 641 315 71 0 0 chr3R 7377116 7377158 -20527895 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 641 241 250 0 0 chr3R 7378212 7378280 -20526773 + T-rich Low_complexity Low_complexity 1 68 0 4 641 207 170 0 0 chr3R 7380737 7380784 -20524269 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 641 252 122 0 0 chr3R 7381029 7381070 -20523983 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 641 280 191 11 43 chr3R 7381732 7381825 -20523228 - ROO_I LTR Pao -7526 730 641 4 641 22 56 0 0 chr3R 7389681 7389717 -20515336 + AT_rich Low_complexity Low_complexity 1 36 0 4 641 22 0 0 0 chr3R 7390594 7390616 -20514437 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 26 50 0 0 chr3R 7393434 7393474 -20511579 + AT_rich Low_complexity Low_complexity 1 40 0 4 641 2422 18 33 0 chr3R 7394076 7394350 -20510703 - G5_DM LINE Jockey -524 4332 4050 4 641 249 132 0 0 chr3R 7398146 7398184 -20506869 - ARS406_DM Unknown Unknown -1 352 315 4 641 204 214 24 0 chr3R 7407500 7407542 -20497511 + (CAG)n Simple_repeat Simple_repeat 1 43 0 4 641 25 0 0 0 chr3R 7411595 7411620 -20493433 + AT_rich Low_complexity Low_complexity 1 25 0 4 641 213 121 0 0 chr3R 7413356 7413389 -20491664 + (TGG)n Simple_repeat Simple_repeat 3 35 0 4 641 213 39 0 0 chr3R 7417780 7417806 -20487247 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 4 641 27 29 0 0 chr3R 7417851 7417885 -20487168 + AT_rich Low_complexity Low_complexity 1 34 0 4 641 22 0 0 0 chr3R 7418605 7418627 -20486426 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 216 149 0 0 chr3R 7421871 7421918 -20483135 + (T)n Simple_repeat Simple_repeat 1 47 0 4 641 214 244 0 0 chr3R 7422892 7422937 -20482116 + (CAGC)n Simple_repeat Simple_repeat 3 47 0 4 641 204 111 0 0 chr3R 7424563 7424599 -20480454 + (GAAAA)n Simple_repeat Simple_repeat 1 36 0 4 641 231 146 0 0 chr3R 7426140 7426181 -20478872 + (T)n Simple_repeat Simple_repeat 1 41 0 4 641 235 179 30 0 chr3R 7427783 7427850 -20477203 + (CGGA)n Simple_repeat Simple_repeat 4 72 0 4 641 183 42 0 0 chr3R 7428889 7428913 -20476140 + (GCTTG)n Simple_repeat Simple_repeat 3 26 0 4 641 216 0 0 0 chr3R 7430383 7430407 -20474646 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 641 27 49 0 0 chr3R 7432641 7432682 -20472371 + AT_rich Low_complexity Low_complexity 1 41 0 4 641 207 0 0 0 chr3R 7433002 7433025 -20472028 + (CATCG)n Simple_repeat Simple_repeat 5 27 0 4 641 219 36 0 0 chr3R 7433316 7433344 -20471709 + (T)n Simple_repeat Simple_repeat 1 28 0 4 641 238 211 0 17 chr3R 7441525 7441583 -20463470 + (CAGG)n Simple_repeat Simple_repeat 1 57 0 4 641 26 50 0 0 chr3R 7448962 7449002 -20456051 + AT_rich Low_complexity Low_complexity 1 40 0 4 641 27 29 0 0 chr3R 7450604 7450638 -20454415 + AT_rich Low_complexity Low_complexity 1 34 0 4 641 22 0 0 0 chr3R 7458755 7458777 -20446276 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 26 30 0 0 chr3R 7458832 7458865 -20446188 + AT_rich Low_complexity Low_complexity 1 33 0 4 641 30 27 0 0 chr3R 7459160 7459197 -20445856 + AT_rich Low_complexity Low_complexity 1 37 0 4 641 21 36 0 0 chr3R 7459529 7459557 -20445496 + AT_rich Low_complexity Low_complexity 1 28 0 4 641 206 286 0 38 chr3R 7462451 7462531 -20442522 + (CGG)n Simple_repeat Simple_repeat 2 78 0 4 641 208 122 0 58 chr3R 7462562 7462614 -20442439 + (CTG)n Simple_repeat Simple_repeat 3 51 0 4 641 21 0 0 0 chr3R 7462755 7462776 -20442277 + AT_rich Low_complexity Low_complexity 1 21 0 4 641 180 0 0 0 chr3R 7467205 7467225 -20437828 + (TTGTG)n Simple_repeat Simple_repeat 1 20 0 4 642 225 196 0 0 chr3R 7471209 7471255 -20433798 + T-rich Low_complexity Low_complexity 1 46 0 4 642 255 31 0 0 chr3R 7471662 7471694 -20433359 + (A)n Simple_repeat Simple_repeat 1 32 0 4 642 25 0 0 0 chr3R 7471928 7471953 -20433100 + AT_rich Low_complexity Low_complexity 1 25 0 4 642 23 0 0 0 chr3R 7472375 7472398 -20432655 + AT_rich Low_complexity Low_complexity 1 23 0 4 642 203 184 0 0 chr3R 7472617 7472655 -20432398 + T-rich Low_complexity Low_complexity 4 41 0 4 642 205 208 19 0 chr3R 7472754 7472807 -20432246 + A-rich Low_complexity Low_complexity 4 57 0 4 642 27 0 0 0 chr3R 7473221 7473248 -20431805 + AT_rich Low_complexity Low_complexity 1 27 0 4 642 285 29 0 0 chr3R 7474694 7474728 -20430325 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 642 278 273 0 26 chr3R 7475823 7475936 -20429117 + (TTG)n Simple_repeat Simple_repeat 2 111 0 4 642 22 0 0 0 chr3R 7481657 7481679 -20423374 + AT_rich Low_complexity Low_complexity 1 22 0 4 642 21 0 0 0 chr3R 7491862 7491883 -20413170 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 31 0 0 0 chr3R 7491951 7491982 -20413071 + AT_rich Low_complexity Low_complexity 1 31 0 4 642 301 360 0 0 chr3R 7495081 7495234 -20409819 + (CAG)n Simple_repeat Simple_repeat 3 155 0 4 642 228 281 0 0 chr3R 7495990 7496072 -20408981 + (CAA)n Simple_repeat Simple_repeat 3 84 0 4 642 24 85 0 0 chr3R 7515355 7515414 -20389639 + AT_rich Low_complexity Low_complexity 1 59 0 4 642 22 0 0 0 chr3R 7519132 7519154 -20385899 + AT_rich Low_complexity Low_complexity 1 22 0 4 642 24 0 0 0 chr3R 7520243 7520267 -20384786 + AT_rich Low_complexity Low_complexity 1 24 0 4 642 21 0 0 0 chr3R 7520394 7520415 -20384638 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 228 35 0 0 chr3R 7524680 7524709 -20380344 + (AGCTG)n Simple_repeat Simple_repeat 1 29 0 4 642 26 0 0 0 chr3R 7531954 7531980 -20373073 + AT_rich Low_complexity Low_complexity 1 26 0 4 642 189 0 0 0 chr3R 7532739 7532760 -20372293 + (T)n Simple_repeat Simple_repeat 1 21 0 4 642 204 264 0 0 chr3R 7533354 7533407 -20371646 + C-rich Low_complexity Low_complexity 6 58 0 4 642 21 36 0 0 chr3R 7541615 7541643 -20363410 + AT_rich Low_complexity Low_complexity 1 28 0 4 642 21 0 0 0 chr3R 7541918 7541939 -20363114 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 207 114 0 0 chr3R 7542176 7542211 -20362842 + (GGAGA)n Simple_repeat Simple_repeat 1 35 0 4 642 26 0 0 0 chr3R 7547998 7548024 -20357029 + AT_rich Low_complexity Low_complexity 1 26 0 4 642 225 94 0 0 chr3R 7548561 7548593 -20356460 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 642 180 0 0 0 chr3R 7555132 7555152 -20349901 + (CGA)n Simple_repeat Simple_repeat 2 21 0 4 642 228 67 0 0 chr3R 7557367 7557397 -20347656 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 642 228 67 0 0 chr3R 7559249 7559279 -20345774 + (CAGAA)n Simple_repeat Simple_repeat 4 33 0 4 642 23 97 0 0 chr3R 7578251 7578323 -20326730 + AT_rich Low_complexity Low_complexity 1 72 0 4 642 231 61 0 0 chr3R 7578478 7578511 -20326542 + (T)n Simple_repeat Simple_repeat 1 33 0 4 642 235 204 0 0 chr3R 7579393 7579442 -20325611 + (TCG)n Simple_repeat Simple_repeat 3 51 0 4 642 206 227 0 0 chr3R 7579635 7579679 -20325374 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 642 21 0 0 0 chr3R 7585007 7585028 -20320025 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 238 184 0 62 chr3R 7585245 7585326 -20319727 - ROO_I LTR Pao -7539 717 642 4 642 180 97 0 0 chr3R 7589621 7589652 -20315401 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 642 224 222 0 0 chr3R 7589889 7589943 -20315110 + (TTG)n Simple_repeat Simple_repeat 3 56 0 4 642 25 0 0 0 chr3R 7590470 7590495 -20314558 + AT_rich Low_complexity Low_complexity 1 25 0 4 642 22 0 0 0 chr3R 7590665 7590687 -20314366 + AT_rich Low_complexity Low_complexity 1 22 0 4 642 23 0 0 0 chr3R 7591174 7591197 -20313856 + AT_rich Low_complexity Low_complexity 1 23 0 4 642 189 0 0 0 chr3R 7591331 7591352 -20313701 + (CAATT)n Simple_repeat Simple_repeat 5 25 0 4 642 293 82 0 20 chr3R 7592093 7592143 -20312910 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 4 642 180 97 0 0 chr3R 7592303 7592334 -20312719 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 642 31 58 0 0 chr3R 7594941 7594993 -20310060 + AT_rich Low_complexity Low_complexity 1 52 0 4 642 24 32 0 0 chr3R 7597704 7597735 -20307318 + AT_rich Low_complexity Low_complexity 1 31 0 4 642 39 22 0 0 chr3R 7598925 7598971 -20306082 + AT_rich Low_complexity Low_complexity 1 46 0 4 642 223 250 16 0 chr3R 7601770 7601834 -20303219 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 643 22 0 0 0 chr3R 7603052 7603074 -20301979 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 180 176 0 0 chr3R 7603600 7603634 -20301419 + (TGG)n Simple_repeat Simple_repeat 2 35 0 4 643 24 0 0 0 chr3R 7604460 7604484 -20300569 + AT_rich Low_complexity Low_complexity 1 24 0 4 643 195 129 0 0 chr3R 7605914 7605945 -20299108 + (CATA)n Simple_repeat Simple_repeat 3 33 0 4 643 208 235 0 38 chr3R 7606566 7606619 -20298434 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 4 643 21 36 0 0 chr3R 7612614 7612642 -20292411 + AT_rich Low_complexity Low_complexity 1 28 0 4 643 25 31 0 0 chr3R 7614325 7614357 -20290696 + AT_rich Low_complexity Low_complexity 1 32 0 4 643 24 32 0 0 chr3R 7615235 7615266 -20289787 + AT_rich Low_complexity Low_complexity 1 31 0 4 643 22 56 0 0 chr3R 7619379 7619415 -20285638 + AT_rich Low_complexity Low_complexity 1 36 0 4 643 26 0 0 0 chr3R 7628763 7628789 -20276264 + AT_rich Low_complexity Low_complexity 1 26 0 4 643 22 35 0 0 chr3R 7629199 7629228 -20275825 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 24 0 0 0 chr3R 7630759 7630783 -20274270 + AT_rich Low_complexity Low_complexity 1 24 0 4 643 248 53 132 0 chr3R 7633105 7633143 -20271910 + DNAREP1_DM LINE Penelope 1 43 -551 4 643 24 0 0 0 chr3R 7633241 7633265 -20271788 + AT_rich Low_complexity Low_complexity 1 24 0 4 643 1101 152 180 38 chr3R 7633267 7633506 -20271547 + DNAREP1_DM LINE Penelope 322 594 0 4 643 26 64 0 0 chr3R 7635101 7635148 -20269905 + AT_rich Low_complexity Low_complexity 1 47 0 4 643 233 194 13 141 chr3R 7636516 7636594 -20268459 - ROO_I LTR Pao -7551 705 638 4 643 23 92 0 0 chr3R 7640928 7640993 -20264060 + AT_rich Low_complexity Low_complexity 1 65 0 4 643 246 250 0 0 chr3R 7648696 7648756 -20256297 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 643 207 204 0 0 chr3R 7653448 7653497 -20251556 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 643 198 103 0 0 chr3R 7655083 7655112 -20249941 + (CACTC)n Simple_repeat Simple_repeat 4 32 0 4 643 200 212 0 15 chr3R 7656418 7656485 -20248568 + (CAA)n Simple_repeat Simple_repeat 1 66 0 4 643 455 21 106 11 chr3R 7656745 7656839 -20248214 + (TATAG)n Simple_repeat Simple_repeat 2 104 0 4 643 26 93 0 0 chr3R 7656841 7656916 -20248137 + AT_rich Low_complexity Low_complexity 1 75 0 4 643 21 0 0 0 chr3R 7664835 7664856 -20240197 + AT_rich Low_complexity Low_complexity 1 21 0 4 643 200 232 0 18 chr3R 7666642 7666699 -20238354 + (CAA)n Simple_repeat Simple_repeat 3 58 0 4 643 47263 6 0 1 chr3R 7666844 7671970 -20233083 - BS LINE Jockey 0 5126 5 4 643 29 0 0 0 chr3R 7673315 7673344 -20231709 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 25 0 0 0 chr3R 7674642 7674667 -20230386 + AT_rich Low_complexity Low_complexity 1 25 0 4 643 22 0 0 0 chr3R 7674862 7674884 -20230169 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 25 31 0 0 chr3R 7677892 7677924 -20227129 + AT_rich Low_complexity Low_complexity 1 32 0 4 643 23 54 0 0 chr3R 7681849 7681886 -20223167 + AT_rich Low_complexity Low_complexity 1 37 0 4 643 34 65 0 0 chr3R 7682901 7682963 -20222090 + AT_rich Low_complexity Low_complexity 1 62 0 4 643 26 0 0 0 chr3R 7683839 7683865 -20221188 + AT_rich Low_complexity Low_complexity 1 26 0 4 643 22 35 0 0 chr3R 7684107 7684136 -20220917 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 31 0 0 0 chr3R 7687346 7687377 -20217676 + AT_rich Low_complexity Low_complexity 1 31 0 4 643 23 54 0 0 chr3R 7690438 7690475 -20214578 + AT_rich Low_complexity Low_complexity 1 37 0 4 643 30 45 0 0 chr3R 7693929 7693973 -20211080 + AT_rich Low_complexity Low_complexity 1 44 0 4 643 192 40 0 0 chr3R 7694773 7694798 -20210255 + (TTG)n Simple_repeat Simple_repeat 1 25 0 4 643 22 56 0 0 chr3R 7695561 7695597 -20209456 + AT_rich Low_complexity Low_complexity 1 36 0 4 643 207 100 0 0 chr3R 7695978 7696008 -20209045 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 4 643 263 329 0 0 chr3R 7696016 7696092 -20208961 + (CTG)n Simple_repeat Simple_repeat 2 77 0 4 643 186 43 0 0 chr3R 7697878 7697901 -20207152 + (AACTG)n Simple_repeat Simple_repeat 4 26 0 4 643 22 35 0 0 chr3R 7698542 7698571 -20206482 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 26 0 0 0 chr3R 7699001 7699027 -20206026 + AT_rich Low_complexity Low_complexity 1 26 0 4 643 189 0 0 0 chr3R 7700201 7700222 -20204831 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 643 28 0 0 0 chr3R 7701455 7701483 -20203570 + AT_rich Low_complexity Low_complexity 1 28 0 4 643 22 0 0 0 chr3R 7701633 7701655 -20203398 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 219 69 0 0 chr3R 7702732 7702761 -20202292 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 643 21 36 0 0 chr3R 7708314 7708342 -20196711 + AT_rich Low_complexity Low_complexity 1 28 0 4 643 22 0 0 0 chr3R 7708376 7708398 -20196655 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 30 0 0 0 chr3R 7718960 7718990 -20186063 + AT_rich Low_complexity Low_complexity 1 30 0 4 643 189 0 0 0 chr3R 7724076 7724097 -20180956 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 643 25 83 0 0 chr3R 7729431 7729491 -20175562 + AT_rich Low_complexity Low_complexity 1 60 0 4 643 312 94 0 0 chr3R 7732223 7732276 -20172777 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 643 23 78 0 0 chr3R 7732626 7732677 -20172376 + AT_rich Low_complexity Low_complexity 1 51 0 4 643 183 100 0 0 chr3R 7732925 7732955 -20172098 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 644 202 135 27 0 chr3R 7735255 7735292 -20169761 + (GGTTG)n Simple_repeat Simple_repeat 5 42 0 4 644 21 0 0 0 chr3R 7741235 7741256 -20163797 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 24 32 0 0 chr3R 7742524 7742555 -20162498 + AT_rich Low_complexity Low_complexity 1 31 0 4 644 195 42 0 0 chr3R 7746305 7746329 -20158724 + (AGGGGG)n Simple_repeat Simple_repeat 6 29 0 4 644 21 71 0 0 chr3R 7748118 7748160 -20156893 + AT_rich Low_complexity Low_complexity 1 42 0 4 644 222 91 0 0 chr3R 7748263 7748296 -20156757 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 644 23 33 0 0 chr3R 7748621 7748651 -20156402 + AT_rich Low_complexity Low_complexity 1 30 0 4 644 24 0 0 0 chr3R 7750046 7750070 -20154983 + AT_rich Low_complexity Low_complexity 1 24 0 4 644 341 190 0 0 chr3R 7751517 7751575 -20153478 + (TCTCTG)n Simple_repeat Simple_repeat 5 62 0 4 644 30 59 0 0 chr3R 7753531 7753582 -20151471 + AT_rich Low_complexity Low_complexity 1 51 0 4 644 34 24 0 0 chr3R 7759571 7759612 -20145441 + AT_rich Low_complexity Low_complexity 1 41 0 4 644 209 217 32 32 chr3R 7761343 7761405 -20143648 + (CAGAGA)n Simple_repeat Simple_repeat 1 62 0 4 644 21 82 0 0 chr3R 7762935 7762984 -20142069 + AT_rich Low_complexity Low_complexity 1 49 0 4 644 192 135 0 0 chr3R 7764968 7765005 -20140048 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 644 234 0 0 0 chr3R 7767115 7767141 -20137912 + (T)n Simple_repeat Simple_repeat 1 26 0 4 644 27 0 0 0 chr3R 7769133 7769160 -20135893 + AT_rich Low_complexity Low_complexity 1 27 0 4 644 23 54 0 0 chr3R 7770465 7770502 -20134551 + AT_rich Low_complexity Low_complexity 1 37 0 4 644 24 32 0 0 chr3R 7771417 7771448 -20133605 + AT_rich Low_complexity Low_complexity 1 31 0 4 644 236 192 95 14 chr3R 7772224 7772298 -20132755 + DNAREP1_DM LINE Penelope 22 101 -493 4 644 23 0 0 0 chr3R 7773812 7773835 -20131218 + AT_rich Low_complexity Low_complexity 1 23 0 4 644 180 77 0 0 chr3R 7774031 7774057 -20130996 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 4 644 21 0 0 0 chr3R 7775080 7775101 -20129952 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 183 42 0 0 chr3R 7776296 7776320 -20128733 + (CAG)n Simple_repeat Simple_repeat 3 26 0 4 644 206 136 23 0 chr3R 7777850 7777894 -20127159 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 644 204 286 0 0 chr3R 7779133 7779182 -20125871 + (CAG)n Simple_repeat Simple_repeat 2 50 0 4 644 24 32 0 0 chr3R 7779878 7779909 -20125144 + AT_rich Low_complexity Low_complexity 1 31 0 4 644 1088 97 56 0 chr3R 7782763 7782959 -20122094 - S_DM DNA Tc1 -4 1732 1526 4 644 206 244 0 0 chr3R 7783134 7783175 -20121878 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 4 644 284 188 14 0 chr3R 7783333 7783402 -20121651 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 644 183 80 0 0 chr3R 7783472 7783497 -20121556 + (CATA)n Simple_repeat Simple_repeat 4 28 0 4 644 1685 52 0 0 chr3R 7783627 7783857 -20121196 + S_DM DNA Tc1 1507 1736 0 4 644 23 33 0 0 chr3R 7786612 7786642 -20118411 + AT_rich Low_complexity Low_complexity 1 30 0 4 644 21 0 0 0 chr3R 7793318 7793339 -20111714 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 21 89 0 0 chr3R 7794804 7794860 -20110193 + AT_rich Low_complexity Low_complexity 1 56 0 4 644 32 0 0 0 chr3R 7803247 7803279 -20101774 + AT_rich Low_complexity Low_complexity 1 32 0 4 644 24 0 0 0 chr3R 7803959 7803983 -20101070 + AT_rich Low_complexity Low_complexity 1 24 0 4 644 186 43 0 0 chr3R 7804706 7804729 -20100324 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 644 26 0 0 0 chr3R 7808189 7808215 -20096838 + AT_rich Low_complexity Low_complexity 1 26 0 4 644 180 0 0 0 chr3R 7813744 7813764 -20091289 + (CATA)n Simple_repeat Simple_repeat 1 20 0 4 644 246 32 0 0 chr3R 7815337 7815368 -20089685 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 644 22 0 0 0 chr3R 7818151 7818173 -20086880 + AT_rich Low_complexity Low_complexity 1 22 0 4 644 198 143 0 0 chr3R 7819186 7819221 -20085832 + (TATG)n Simple_repeat Simple_repeat 2 36 0 4 644 22 56 0 0 chr3R 7819903 7819939 -20085114 + AT_rich Low_complexity Low_complexity 1 36 0 4 644 25 31 0 0 chr3R 7820016 7820048 -20085005 + AT_rich Low_complexity Low_complexity 1 32 0 4 644 21 36 0 0 chr3R 7820556 7820584 -20084469 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 25 31 0 0 chr3R 7822870 7822902 -20082151 + AT_rich Low_complexity Low_complexity 1 32 0 4 644 201 162 0 0 chr3R 7823991 7824028 -20081025 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 644 22 35 0 0 chr3R 7824510 7824539 -20080514 + AT_rich Low_complexity Low_complexity 1 29 0 4 644 29 28 0 0 chr3R 7827954 7827990 -20077063 + AT_rich Low_complexity Low_complexity 1 36 0 4 644 279 104 0 0 chr3R 7831302 7831350 -20073703 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 644 22 35 0 0 chr3R 7833319 7833348 -20071705 + AT_rich Low_complexity Low_complexity 1 29 0 4 644 29 28 0 0 chr3R 7833708 7833744 -20071309 + AT_rich Low_complexity Low_complexity 1 36 0 4 644 218 42 61 20 chr3R 7842765 7842814 -20062239 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 644 21 36 0 0 chr3R 7844228 7844256 -20060797 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 28 79 0 0 chr3R 7846583 7846646 -20058407 + AT_rich Low_complexity Low_complexity 1 63 0 4 644 19492 1 1 1 chr3R 7848659 7850781 -20054272 - POGO DNA Pogo 0 2121 1 4 644 183 42 0 0 chr3R 7852138 7852162 -20052891 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 644 183 80 0 0 chr3R 7852667 7852692 -20052361 + (CGAAT)n Simple_repeat Simple_repeat 3 27 0 4 644 22 0 0 0 chr3R 7852863 7852885 -20052168 + AT_rich Low_complexity Low_complexity 1 22 0 4 644 206 98 0 47 chr3R 7852931 7852974 -20052079 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 4 644 26 30 0 0 chr3R 7853122 7853155 -20051898 + AT_rich Low_complexity Low_complexity 1 33 0 4 644 25 75 0 0 chr3R 7853798 7853851 -20051202 + AT_rich Low_complexity Low_complexity 1 53 0 4 644 21 36 0 0 chr3R 7854888 7854916 -20050137 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 24 67 0 0 chr3R 7858910 7858955 -20046098 + AT_rich Low_complexity Low_complexity 1 45 0 4 644 22 35 0 0 chr3R 7863072 7863101 -20041952 + AT_rich Low_complexity Low_complexity 1 29 0 4 645 264 30 0 0 chr3R 7869788 7869821 -20035232 + (CTG)n Simple_repeat Simple_repeat 2 34 0 4 645 25 75 0 0 chr3R 7871045 7871098 -20033955 + AT_rich Low_complexity Low_complexity 1 53 0 4 645 24 32 0 0 chr3R 7872646 7872677 -20032376 + AT_rich Low_complexity Low_complexity 1 31 0 4 645 278 129 16 0 chr3R 7878147 7878209 -20026844 + (CCCA)n Simple_repeat Simple_repeat 4 66 0 4 645 311 0 0 25 chr3R 7883919 7883959 -20021094 + (CATA)n Simple_repeat Simple_repeat 4 42 0 4 645 21 0 0 0 chr3R 7885400 7885421 -20019632 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 21 0 0 0 chr3R 7886790 7886811 -20018242 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 220 250 0 0 chr3R 7891069 7891133 -20013920 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 645 29 28 0 0 chr3R 7898994 7899030 -20006023 + AT_rich Low_complexity Low_complexity 1 36 0 4 645 30 0 0 0 chr3R 7899666 7899696 -20005357 + AT_rich Low_complexity Low_complexity 1 30 0 4 645 210 71 0 0 chr3R 7900640 7900668 -20004385 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 4 645 28 0 0 0 chr3R 7904913 7904941 -20000112 + AT_rich Low_complexity Low_complexity 1 28 0 4 645 204 40 0 0 chr3R 7905359 7905384 -19999669 + (TCC)n Simple_repeat Simple_repeat 1 25 0 4 645 44 91 0 0 chr3R 7906183 7906304 -19998749 + AT_rich Low_complexity Low_complexity 1 121 0 4 645 223 288 0 0 chr3R 7907471 7907537 -19997516 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 645 31 68 0 0 chr3R 7910323 7910382 -19994671 + AT_rich Low_complexity Low_complexity 1 59 0 4 645 23 0 0 0 chr3R 7913936 7913959 -19991094 + AT_rich Low_complexity Low_complexity 1 23 0 4 645 23 54 0 0 chr3R 7918716 7918753 -19986300 + AT_rich Low_complexity Low_complexity 1 37 0 4 645 22 0 0 0 chr3R 7920053 7920075 -19984978 + AT_rich Low_complexity Low_complexity 1 22 0 4 645 267 79 0 0 chr3R 7922123 7922161 -19982892 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 4 645 21 0 0 0 chr3R 7923448 7923469 -19981584 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 22 0 0 0 chr3R 7927362 7927384 -19977669 + AT_rich Low_complexity Low_complexity 1 22 0 4 645 27 0 0 0 chr3R 7928256 7928283 -19976770 + AT_rich Low_complexity Low_complexity 1 27 0 4 645 21 36 0 0 chr3R 7929493 7929521 -19975532 + AT_rich Low_complexity Low_complexity 1 28 0 4 645 201 196 0 0 chr3R 7930864 7930915 -19974138 + T-rich Low_complexity Low_complexity 1 51 0 4 645 22 35 0 0 chr3R 7932673 7932702 -19972351 + AT_rich Low_complexity Low_complexity 1 29 0 4 645 333 246 0 32 chr3R 7933241 7933367 -19971686 + ROO_I LTR Pao 641 762 -7494 4 645 195 114 0 0 chr3R 7934676 7934711 -19970342 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 4 645 198 71 0 0 chr3R 7934835 7934863 -19970190 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 645 201 121 0 0 chr3R 7936441 7936474 -19968579 + (CCTAT)n Simple_repeat Simple_repeat 1 33 0 4 645 21 0 0 0 chr3R 7937730 7937751 -19967302 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 261 0 0 0 chr3R 7942548 7942577 -19962476 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 645 24 32 0 0 chr3R 7943074 7943105 -19961948 + AT_rich Low_complexity Low_complexity 1 31 0 4 645 249 33 0 0 chr3R 7944591 7944621 -19960432 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 645 22 0 0 0 chr3R 7946518 7946540 -19958513 + AT_rich Low_complexity Low_complexity 1 22 0 4 645 22 35 0 0 chr3R 7947236 7947265 -19957788 + AT_rich Low_complexity Low_complexity 1 29 0 4 645 25 0 0 0 chr3R 7947384 7947409 -19957644 + AT_rich Low_complexity Low_complexity 1 25 0 4 645 23 0 0 0 chr3R 7947428 7947451 -19957602 + AT_rich Low_complexity Low_complexity 1 23 0 4 645 25 31 0 0 chr3R 7947702 7947734 -19957319 + AT_rich Low_complexity Low_complexity 1 32 0 4 645 189 0 0 0 chr3R 7948185 7948206 -19956847 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 645 204 40 0 0 chr3R 7948886 7948911 -19956142 + (CGAAA)n Simple_repeat Simple_repeat 3 27 0 4 645 213 39 0 0 chr3R 7951334 7951360 -19953693 + (ATG)n Simple_repeat Simple_repeat 3 28 0 4 645 234 62 0 0 chr3R 7952307 7952339 -19952714 + (A)n Simple_repeat Simple_repeat 1 32 0 4 645 25 51 0 0 chr3R 7953238 7953277 -19951776 + AT_rich Low_complexity Low_complexity 1 39 0 4 645 31 26 0 0 chr3R 7954153 7954191 -19950862 + AT_rich Low_complexity Low_complexity 1 38 0 4 645 23 0 0 0 chr3R 7956578 7956601 -19948452 + AT_rich Low_complexity Low_complexity 1 23 0 4 645 26 0 0 0 chr3R 7958856 7958882 -19946171 + AT_rich Low_complexity Low_complexity 1 26 0 4 645 26 0 0 0 chr3R 7959904 7959930 -19945123 + AT_rich Low_complexity Low_complexity 1 26 0 4 645 22 56 0 0 chr3R 7960129 7960165 -19944888 + AT_rich Low_complexity Low_complexity 1 36 0 4 645 214 120 0 74 chr3R 7964627 7964681 -19940372 + (CATTT)n Simple_repeat Simple_repeat 1 50 0 4 645 21 57 0 0 chr3R 7966778 7966813 -19938240 + AT_rich Low_complexity Low_complexity 1 35 0 4 645 210 174 0 0 chr3R 7967228 7967274 -19937779 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 645 21 0 0 0 chr3R 7968098 7968119 -19936934 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 21 0 0 0 chr3R 7969716 7969737 -19935316 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 234 169 0 0 chr3R 7970294 7970359 -19934694 + (TGG)n Simple_repeat Simple_repeat 3 67 0 4 645 211 174 0 42 chr3R 7976765 7976813 -19928240 + (TCTCTG)n Simple_repeat Simple_repeat 2 47 0 4 645 192 186 0 0 chr3R 7978080 7978139 -19926914 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 645 204 139 28 0 chr3R 7979585 7979621 -19925432 + (CAA)n Simple_repeat Simple_repeat 1 37 0 4 645 255 61 0 0 chr3R 7983244 7983277 -19921776 + (GCTG)n Simple_repeat Simple_repeat 1 33 0 4 645 249 265 29 0 chr3R 7985274 7985342 -19919711 + (CCCCAG)n Simple_repeat Simple_repeat 1 70 0 4 645 202 329 0 0 chr3R 7990673 7990758 -19914295 + (CAG)n Simple_repeat Simple_repeat 3 87 0 4 645 24 32 0 0 chr3R 7994216 7994247 -19910806 + AT_rich Low_complexity Low_complexity 1 31 0 4 646 243 0 0 0 chr3R 8000560 8000587 -19904466 + (A)n Simple_repeat Simple_repeat 1 27 0 4 646 29 28 0 0 chr3R 8001248 8001284 -19903769 + AT_rich Low_complexity Low_complexity 1 36 0 4 646 21 0 0 0 chr3R 8006934 8006955 -19898098 + AT_rich Low_complexity Low_complexity 1 21 0 4 646 192 40 0 0 chr3R 8007151 8007176 -19897877 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 646 25 31 0 0 chr3R 8007959 8007991 -19897062 + AT_rich Low_complexity Low_complexity 1 32 0 4 646 216 0 0 0 chr3R 8010356 8010380 -19894673 + (CGAGG)n Simple_repeat Simple_repeat 5 28 0 4 646 21 36 0 0 chr3R 8010601 8010629 -19894424 + AT_rich Low_complexity Low_complexity 1 28 0 4 646 27 62 0 0 chr3R 8014003 8014051 -19891002 + AT_rich Low_complexity Low_complexity 1 48 0 4 646 219 125 0 0 chr3R 8022482 8022522 -19882531 + (CAA)n Simple_repeat Simple_repeat 2 41 0 4 646 27 29 0 0 chr3R 8030403 8030437 -19874616 + AT_rich Low_complexity Low_complexity 1 34 0 4 646 23 0 0 0 chr3R 8030570 8030593 -19874460 + AT_rich Low_complexity Low_complexity 1 23 0 4 646 279 54 0 0 chr3R 8030983 8031020 -19874033 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 646 25 31 0 0 chr3R 8037229 8037261 -19867792 + AT_rich Low_complexity Low_complexity 1 32 0 4 646 641 107 181 90 chr3R 8038021 8038165 -19866888 - DNAREP1_DM LINE Penelope 0 594 438 4 646 1252 111 48 0 chr3R 8038164 8038353 -19866700 - DNAREP1_DM LINE Penelope -396 198 1 4 646 23 33 0 0 chr3R 8039410 8039440 -19865613 + AT_rich Low_complexity Low_complexity 1 30 0 4 646 186 171 0 0 chr3R 8040547 8040588 -19864465 + (TGG)n Simple_repeat Simple_repeat 2 42 0 4 646 195 139 0 0 chr3R 8041154 8041190 -19863863 + (CGG)n Simple_repeat Simple_repeat 2 37 0 4 646 25 51 0 0 chr3R 8049089 8049128 -19855925 + AT_rich Low_complexity Low_complexity 1 39 0 4 646 23 0 0 0 chr3R 8062868 8062891 -19842162 + AT_rich Low_complexity Low_complexity 1 23 0 4 646 195 192 0 40 chr3R 8067508 8067584 -19837469 + (CCCGAA)n Simple_repeat Simple_repeat 2 74 0 4 646 33 0 0 0 chr3R 8069986 8070019 -19835034 + AT_rich Low_complexity Low_complexity 1 33 0 4 646 201 94 0 0 chr3R 8085599 8085631 -19819422 + (TGGA)n Simple_repeat Simple_repeat 4 35 0 4 646 222 204 0 0 chr3R 8089318 8089362 -19815691 + (CAT)n Simple_repeat Simple_repeat 1 44 0 4 646 212 200 0 62 chr3R 8090147 8090211 -19814842 + GA-rich Low_complexity Low_complexity 2 61 0 4 646 225 213 0 21 chr3R 8091038 8091086 -19813967 + A-rich Low_complexity Low_complexity 4 50 0 4 646 27 49 0 0 chr3R 8100784 8100825 -19804228 + AT_rich Low_complexity Low_complexity 1 41 0 4 646 21 36 0 0 chr3R 8101339 8101367 -19803686 + AT_rich Low_complexity Low_complexity 1 28 0 4 646 36 0 0 0 chr3R 8105984 8106020 -19799033 + AT_rich Low_complexity Low_complexity 1 36 0 4 646 228 200 0 35 chr3R 8106575 8106632 -19798421 + (TGG)n Simple_repeat Simple_repeat 3 57 0 4 646 183 80 0 0 chr3R 8106812 8106837 -19798216 + (TCGGG)n Simple_repeat Simple_repeat 3 27 0 4 646 21 0 0 0 chr3R 8107091 8107112 -19797941 + AT_rich Low_complexity Low_complexity 1 21 0 4 646 195 42 0 0 chr3R 8108781 8108805 -19796248 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 646 215 289 0 13 chr3R 8109789 8109866 -19795187 + (TCTG)n Simple_repeat Simple_repeat 3 78 0 4 646 216 67 0 0 chr3R 8112823 8112853 -19792200 + (GCTG)n Simple_repeat Simple_repeat 3 32 0 4 646 255 61 0 0 chr3R 8114102 8114135 -19790918 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 646 291 130 0 0 chr3R 8116743 8116797 -19788256 + (ACTG)n Simple_repeat Simple_repeat 1 54 0 4 646 21 0 0 0 chr3R 8122477 8122498 -19782555 + AT_rich Low_complexity Low_complexity 1 21 0 4 646 233 232 36 0 chr3R 8123630 8123686 -19781367 + (CCCCAG)n Simple_repeat Simple_repeat 1 58 0 4 647 252 222 0 0 chr3R 8126800 8126872 -19778181 + (CGG)n Simple_repeat Simple_repeat 1 72 0 4 647 229 248 26 34 chr3R 8126953 8127070 -19777983 + ROO_I LTR Pao 641 756 -7500 4 647 338 107 18 0 chr3R 8127327 8127383 -19777670 + (CAG)n Simple_repeat Simple_repeat 3 59 0 4 647 291 215 17 78 chr3R 8127431 8127547 -19777506 + ROO_I LTR Pao 640 748 -7508 4 647 203 185 18 36 chr3R 8128058 8128114 -19776939 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 647 26 50 0 0 chr3R 8128207 8128247 -19776806 + AT_rich Low_complexity Low_complexity 1 40 0 4 647 25 65 0 0 chr3R 8128979 8129025 -19776028 + AT_rich Low_complexity Low_complexity 1 46 0 4 647 26 0 0 0 chr3R 8130728 8130754 -19774299 + AT_rich Low_complexity Low_complexity 1 26 0 4 647 24 0 0 0 chr3R 8136075 8136099 -19768954 + AT_rich Low_complexity Low_complexity 1 24 0 4 647 24 0 0 0 chr3R 8136432 8136456 -19768597 + AT_rich Low_complexity Low_complexity 1 24 0 4 647 180 77 0 0 chr3R 8138885 8138911 -19766142 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 4 647 217 259 0 0 chr3R 8139640 8139694 -19765359 + T-rich Low_complexity Low_complexity 1 54 0 4 647 23 0 0 0 chr3R 8140201 8140224 -19764829 + AT_rich Low_complexity Low_complexity 1 23 0 4 647 216 182 0 0 chr3R 8146225 8146269 -19758784 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 4 647 21 82 0 0 chr3R 8147291 8147340 -19757713 + AT_rich Low_complexity Low_complexity 1 49 0 4 647 225 0 0 0 chr3R 8152062 8152087 -19752966 + (TAAG)n Simple_repeat Simple_repeat 2 26 0 4 647 23 0 0 0 chr3R 8154319 8154342 -19750711 + AT_rich Low_complexity Low_complexity 1 23 0 4 647 226 219 0 0 chr3R 8155785 8155826 -19749227 + (CCCGAA)n Simple_repeat Simple_repeat 5 45 0 4 647 288 0 0 0 chr3R 8160681 8160713 -19744340 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 647 23 33 0 0 chr3R 8165008 8165038 -19740015 + AT_rich Low_complexity Low_complexity 1 30 0 4 647 498 91 0 54 chr3R 8167145 8167238 -19737815 - DNAREP1_DM LINE Penelope -443 151 64 4 647 22 56 0 0 chr3R 8167922 8167958 -19737095 + AT_rich Low_complexity Low_complexity 1 36 0 4 647 24 77 0 0 chr3R 8168501 8168553 -19736500 + AT_rich Low_complexity Low_complexity 1 52 0 4 647 37 23 0 0 chr3R 8176484 8176528 -19728525 + AT_rich Low_complexity Low_complexity 1 44 0 4 647 22 0 0 0 chr3R 8179863 8179885 -19725168 + AT_rich Low_complexity Low_complexity 1 22 0 4 647 29 28 0 0 chr3R 8182087 8182123 -19722930 + AT_rich Low_complexity Low_complexity 1 36 0 4 647 21 0 0 0 chr3R 8183924 8183945 -19721108 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 201 39 0 0 chr3R 8187795 8187821 -19717232 + (T)n Simple_repeat Simple_repeat 1 26 0 4 647 23 78 0 0 chr3R 8188907 8188958 -19716095 + AT_rich Low_complexity Low_complexity 1 51 0 4 647 533 106 255 0 chr3R 8189295 8189389 -19715664 + DNAREP1_DM LINE Penelope 3 120 -474 4 647 209 182 0 0 chr3R 8195716 8195749 -19709304 + (TATG)n Simple_repeat Simple_repeat 3 35 0 4 647 32 26 0 0 chr3R 8196849 8196888 -19708165 + AT_rich Low_complexity Low_complexity 1 39 0 4 647 25 31 0 0 chr3R 8197138 8197170 -19707883 + AT_rich Low_complexity Low_complexity 1 32 0 4 647 430 85 34 0 chr3R 8197170 8197229 -19707824 + DNAREP1_DM LINE Penelope 33 93 -501 4 647 29 28 0 0 chr3R 8199464 8199500 -19705553 + AT_rich Low_complexity Low_complexity 1 36 0 4 647 23 54 0 0 chr3R 8201101 8201138 -19703915 + AT_rich Low_complexity Low_complexity 1 37 0 4 647 23 54 0 0 chr3R 8201211 8201248 -19703805 + AT_rich Low_complexity Low_complexity 1 37 0 4 647 21 0 0 0 chr3R 8202181 8202202 -19702851 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 30 27 0 0 chr3R 8203615 8203652 -19701401 + AT_rich Low_complexity Low_complexity 1 37 0 4 647 31 44 0 0 chr3R 8206685 8206730 -19698323 + AT_rich Low_complexity Low_complexity 1 45 0 4 647 22 0 0 0 chr3R 8209627 8209649 -19695404 + AT_rich Low_complexity Low_complexity 1 22 0 4 647 21 0 0 0 chr3R 8209749 8209770 -19695283 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 21 0 0 0 chr3R 8210896 8210917 -19694136 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 23 0 0 0 chr3R 8211285 8211308 -19693745 + AT_rich Low_complexity Low_complexity 1 23 0 4 647 26 74 0 0 chr3R 8213206 8213260 -19691793 + AT_rich Low_complexity Low_complexity 1 54 0 4 647 26 0 0 0 chr3R 8215015 8215041 -19690012 + AT_rich Low_complexity Low_complexity 1 26 0 4 647 21 0 0 0 chr3R 8221944 8221965 -19683088 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 28 29 0 0 chr3R 8228643 8228678 -19676375 + AT_rich Low_complexity Low_complexity 1 35 0 4 647 21 0 0 0 chr3R 8228887 8228908 -19676145 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 22 35 0 0 chr3R 8237454 8237483 -19667570 + AT_rich Low_complexity Low_complexity 1 29 0 4 647 34 24 0 0 chr3R 8239319 8239360 -19665693 + AT_rich Low_complexity Low_complexity 1 41 0 4 647 201 39 0 0 chr3R 8242906 8242932 -19662121 + (T)n Simple_repeat Simple_repeat 1 26 0 4 647 203 176 0 0 chr3R 8246585 8246619 -19658434 + (CCA)n Simple_repeat Simple_repeat 2 35 0 4 647 234 0 0 0 chr3R 8248991 8249017 -19656036 + (CAG)n Simple_repeat Simple_repeat 2 27 0 4 647 21 36 0 0 chr3R 8249434 8249462 -19655591 + AT_rich Low_complexity Low_complexity 1 28 0 4 647 180 0 0 0 chr3R 8249567 8249587 -19655466 + (GCTG)n Simple_repeat Simple_repeat 4 23 0 4 647 186 43 0 0 chr3R 8250002 8250025 -19655028 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 648 25 0 0 0 chr3R 8259644 8259669 -19645384 + AT_rich Low_complexity Low_complexity 1 25 0 4 648 209 54 81 0 chr3R 8259669 8259706 -19645347 + (CTATA)n Simple_repeat Simple_repeat 1 40 0 4 648 21 36 0 0 chr3R 8262881 8262909 -19642144 + AT_rich Low_complexity Low_complexity 1 28 0 4 648 21 0 0 0 chr3R 8274898 8274919 -19630134 + AT_rich Low_complexity Low_complexity 1 21 0 4 648 23 0 0 0 chr3R 8277132 8277155 -19627898 + AT_rich Low_complexity Low_complexity 1 23 0 4 648 26 30 0 0 chr3R 8293933 8293966 -19611087 + AT_rich Low_complexity Low_complexity 1 33 0 4 648 228 158 34 34 chr3R 8294008 8294067 -19610986 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 4 648 1809 0 0 0 chr3R 8294199 8294397 -19610656 - Copia2_LTR_DM LTR Copia 0 198 1 4 648 5769 13 0 0 chr3R 8294397 8295034 -19610019 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8295388 8295558 -19609495 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3858 2 7 0 chr3R 8295558 8295978 -19609075 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8295978 8296010 -19609043 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5722 11 5 0 chr3R 8296010 8296644 -19608409 - Copia2_I LTR Copia 0 4162 3526 4 648 9452 22 2 4 chr3R 8296794 8297901 -19607152 - PROTOP_A DNA P 0 1105 1 4 648 589 0 0 0 chr3R 8298111 8298174 -19606879 - Copia2_LTR_DM LTR Copia 0 198 136 4 648 1741 10 10 0 chr3R 8298172 8298365 -19606688 - Invader1_LTR LTR Gypsy -228 195 1 4 648 5636 8 18 0 chr3R 8298385 8299011 -19606042 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8299365 8299535 -19605518 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3374 20 60 0 chr3R 8299535 8299934 -19605119 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8299934 8299966 -19605087 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5650 22 0 0 chr3R 8299966 8300603 -19604450 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8300957 8301127 -19603926 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3374 20 60 0 chr3R 8301127 8301526 -19603527 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8301526 8301558 -19603495 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5650 22 0 0 chr3R 8301558 8302195 -19602858 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8302549 8302719 -19602334 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3291 10 90 0 chr3R 8302719 8303107 -19601946 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 155 51 17 chr3R 8303692 8303751 -19601302 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 648 1549 6 0 0 chr3R 8303883 8304053 -19601000 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3772 12 7 0 chr3R 8304053 8304473 -19600580 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8304473 8304505 -19600548 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5781 11 0 0 chr3R 8304505 8305142 -19599911 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8305496 8305666 -19599387 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3120 6 6 0 chr3R 8305666 8306008 -19599045 - Invader1_LTR LTR Gypsy 0 423 80 4 648 5773 13 0 0 chr3R 8306027 8306664 -19598389 - Copia2_I LTR Copia 0 4162 3526 4 648 684 0 0 0 chr3R 8306817 8306892 -19598161 - Copia2_LTR_DM LTR Copia -95 103 29 4 648 3860 7 5 0 chr3R 8306892 8307313 -19597740 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8307313 8307345 -19597708 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5584 13 18 0 chr3R 8307345 8307971 -19597082 - Copia2_I LTR Copia 0 4162 3526 4 648 1536 6 0 0 chr3R 8308325 8308495 -19596558 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3857 9 5 0 chr3R 8308495 8308916 -19596137 - Invader1_LTR LTR Gypsy 0 423 1 4 648 4156 11 0 61 chr3R 8308924 8309431 -19595622 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 13829 11 0 5 chr3R 8309431 8310975 -19594078 - MICROPIA_I LTR Gypsy 0 4476 2941 4 648 4731 8 21 0 chr3R 8310976 8311499 -19593554 - Copia2_I LTR Copia -103 4059 3526 4 648 1463 24 0 0 chr3R 8311849 8312019 -19593034 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3734 12 9 0 chr3R 8312019 8312438 -19592615 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8312438 8312470 -19592583 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5781 11 0 0 chr3R 8312470 8313107 -19591946 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8313461 8313631 -19591422 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3120 6 6 0 chr3R 8313631 8313973 -19591080 - Invader1_LTR LTR Gypsy 0 423 80 4 648 5773 13 0 0 chr3R 8313992 8314629 -19590424 - Copia2_I LTR Copia 0 4162 3526 4 648 684 0 0 0 chr3R 8314782 8314857 -19590196 - Copia2_LTR_DM LTR Copia -95 103 29 4 648 3860 7 5 0 chr3R 8314857 8315278 -19589775 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8315278 8315310 -19589743 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5584 13 18 0 chr3R 8315310 8315936 -19589117 - Copia2_I LTR Copia 0 4162 3526 4 648 1536 6 0 0 chr3R 8316290 8316460 -19588593 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3857 9 5 0 chr3R 8316460 8316881 -19588172 - Invader1_LTR LTR Gypsy 0 423 1 4 648 4156 11 0 61 chr3R 8316889 8317396 -19587657 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 33589 10 6 11 chr3R 8317396 8321151 -19583902 - MICROPIA_I LTR Gypsy 0 4476 742 4 648 5689 14 5 2 chr3R 8321140 8321773 -19583280 - MICROPIA_I LTR Gypsy -3841 635 1 4 648 3837 15 37 63 chr3R 8321773 8322262 -19582791 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 5672 19 0 0 chr3R 8322290 8322927 -19582126 - Copia2_I LTR Copia 0 4162 3526 4 648 1521 12 0 0 chr3R 8323248 8323418 -19581635 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3899 2 5 0 chr3R 8323418 8323839 -19581214 - Invader1_LTR LTR Gypsy 0 423 1 4 648 3837 15 37 63 chr3R 8323847 8324336 -19580717 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 5688 17 0 0 chr3R 8324364 8325001 -19580052 - Copia2_I LTR Copia 0 4162 3526 4 648 1548 6 0 0 chr3R 8325322 8325492 -19579561 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3899 2 5 0 chr3R 8325492 8325913 -19579140 - Invader1_LTR LTR Gypsy 0 423 1 4 648 5704 17 0 0 chr3R 8325945 8326582 -19578471 - Copia2_I LTR Copia 0 4162 3526 4 648 272 51 0 0 chr3R 8326663 8326702 -19578351 - Copia2_LTR_DM LTR Copia -159 39 1 4 648 3828 111 21 7 chr3R 8326917 8327523 -19577530 + S_DM DNA Tc1 1122 1736 0 4 648 786 104 49 0 chr3R 8327523 8327684 -19577369 + S_DM DNA Tc1 1568 1736 0 4 648 21 0 0 0 chr3R 8339405 8339426 -19565627 + AT_rich Low_complexity Low_complexity 1 21 0 4 648 238 274 24 0 chr3R 8340766 8340850 -19564203 + GA-rich Low_complexity Low_complexity 1 86 0 4 648 240 188 0 0 chr3R 8347930 8347978 -19557075 + (CTG)n Simple_repeat Simple_repeat 2 49 0 4 648 229 262 0 0 chr3R 8353192 8353253 -19551800 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 648 28 0 0 0 chr3R 8354759 8354787 -19550266 + AT_rich Low_complexity Low_complexity 1 28 0 4 648 231 36 0 0 chr3R 8359162 8359190 -19545863 + (CTG)n Simple_repeat Simple_repeat 3 30 0 4 648 25 31 0 0 chr3R 8359740 8359772 -19545281 + AT_rich Low_complexity Low_complexity 1 32 0 4 648 21 0 0 0 chr3R 8363033 8363054 -19541999 + AT_rich Low_complexity Low_complexity 1 21 0 4 648 25 0 0 0 chr3R 8363091 8363116 -19541937 + AT_rich Low_complexity Low_complexity 1 25 0 4 648 21 82 0 0 chr3R 8363833 8363882 -19541171 + AT_rich Low_complexity Low_complexity 1 49 0 4 648 183 80 0 0 chr3R 8364336 8364361 -19540692 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 648 210 128 0 0 chr3R 8367622 8367661 -19537392 + (CATAC)n Simple_repeat Simple_repeat 5 43 0 4 648 24 85 0 0 chr3R 8368923 8368982 -19536071 + AT_rich Low_complexity Low_complexity 1 59 0 4 648 23 0 0 0 chr3R 8370267 8370290 -19534763 + AT_rich Low_complexity Low_complexity 1 23 0 4 648 202 315 0 0 chr3R 8370892 8370946 -19534107 + (CCCGAA)n Simple_repeat Simple_repeat 4 57 0 4 648 212 256 0 25 chr3R 8373180 8373260 -19531793 + (TTG)n Simple_repeat Simple_repeat 1 78 0 4 648 183 42 0 0 chr3R 8376594 8376618 -19528435 + (TAA)n Simple_repeat Simple_repeat 1 24 0 4 648 213 197 66 0 chr3R 8376626 8376687 -19528366 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 4 648 24 0 0 0 chr3R 8387262 8387286 -19517767 + AT_rich Low_complexity Low_complexity 1 24 0 4 648 24 53 0 0 chr3R 8387977 8388015 -19517038 + AT_rich Low_complexity Low_complexity 1 38 0 4 649 29 0 0 0 chr3R 8388953 8388982 -19516071 + AT_rich Low_complexity Low_complexity 1 29 0 4 649 34 0 0 0 chr3R 8389064 8389098 -19515955 + AT_rich Low_complexity Low_complexity 1 34 0 4 649 214 203 36 48 chr3R 8389454 8389537 -19515516 + (TCTCTG)n Simple_repeat Simple_repeat 6 87 0 4 649 216 0 0 0 chr3R 8391461 8391485 -19513568 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 649 25 90 0 0 chr3R 8392214 8392281 -19512772 + AT_rich Low_complexity Low_complexity 1 67 0 4 649 198 0 0 0 chr3R 8393793 8393815 -19511238 + (CATCC)n Simple_repeat Simple_repeat 1 22 0 4 649 21 0 0 0 chr3R 8394546 8394567 -19510486 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 22 0 0 0 chr3R 8397322 8397344 -19507709 + AT_rich Low_complexity Low_complexity 1 22 0 4 649 25 0 0 0 chr3R 8398863 8398888 -19506165 + AT_rich Low_complexity Low_complexity 1 25 0 4 649 21 0 0 0 chr3R 8399934 8399955 -19505098 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 232 240 227 32 chr3R 8400900 8401085 -19503968 + DNAREP1_DM LINE Penelope 1 221 -373 4 649 189 0 0 0 chr3R 8401120 8401141 -19503912 + (TAA)n Simple_repeat Simple_repeat 2 22 0 4 649 206 140 19 39 chr3R 8401374 8401426 -19503627 + A-rich Low_complexity Low_complexity 3 53 0 4 649 183 80 0 0 chr3R 8402924 8402949 -19502104 + (TGGG)n Simple_repeat Simple_repeat 2 26 0 4 649 207 146 0 0 chr3R 8403529 8403570 -19501483 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 649 24 0 0 0 chr3R 8404421 8404445 -19500608 + AT_rich Low_complexity Low_complexity 1 24 0 4 649 21 0 0 0 chr3R 8404866 8404887 -19500166 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 230 242 0 0 chr3R 8406406 8406468 -19498585 + (CAACT)n Simple_repeat Simple_repeat 3 64 0 4 649 282 106 0 0 chr3R 8408347 8408394 -19496659 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 649 36 40 0 0 chr3R 8411262 8411312 -19493741 + AT_rich Low_complexity Low_complexity 1 50 0 4 649 22 35 0 0 chr3R 8412705 8412734 -19492319 + AT_rich Low_complexity Low_complexity 1 29 0 4 649 225 0 0 0 chr3R 8413398 8413423 -19491630 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 4 649 273 188 15 15 chr3R 8414112 8414177 -19490876 - ROO_I LTR Pao -7515 741 677 4 649 180 111 0 0 chr3R 8414522 8414549 -19490504 + (TTTTTA)n Simple_repeat Simple_repeat 5 31 0 4 649 327 136 61 0 chr3R 8414635 8414701 -19490352 + HOBO DNA hAT 193 262 -2754 4 649 41 21 0 0 chr3R 8414702 8414750 -19490303 + AT_rich Low_complexity Low_complexity 1 48 0 4 649 38 61 0 0 chr3R 8414810 8414876 -19490177 + AT_rich Low_complexity Low_complexity 1 66 0 4 649 23 54 0 0 chr3R 8414928 8414965 -19490088 + AT_rich Low_complexity Low_complexity 1 37 0 4 649 282 200 14 0 chr3R 8414998 8415068 -19489985 + HOBO DNA hAT 2942 3012 -4 4 649 226 196 0 35 chr3R 8416204 8416262 -19488791 + T-rich Low_complexity Low_complexity 4 59 0 4 649 189 0 0 0 chr3R 8416947 8416968 -19488085 + (CGA)n Simple_repeat Simple_repeat 2 22 0 4 649 21 71 0 0 chr3R 8418641 8418683 -19486370 + AT_rich Low_complexity Low_complexity 1 42 0 4 649 192 200 0 0 chr3R 8419485 8419525 -19485528 + (CAT)n Simple_repeat Simple_repeat 1 40 0 4 649 21 36 0 0 chr3R 8420918 8420946 -19484107 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 21 0 0 0 chr3R 8425094 8425115 -19479938 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 211 196 0 0 chr3R 8425567 8425613 -19479440 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 649 259 218 0 0 chr3R 8427853 8427908 -19477145 + (CTG)n Simple_repeat Simple_repeat 3 57 0 4 649 249 83 0 0 chr3R 8434454 8434490 -19470563 + (TTG)n Simple_repeat Simple_repeat 1 36 0 4 649 21 36 0 0 chr3R 8434762 8434790 -19470263 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 183 170 0 0 chr3R 8436556 8436603 -19468450 + (ATGGTG)n Simple_repeat Simple_repeat 3 49 0 4 649 204 97 0 0 chr3R 8438437 8438468 -19466585 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 649 192 111 0 0 chr3R 8438516 8438552 -19466501 + (GGA)n Simple_repeat Simple_repeat 1 36 0 4 649 24 0 0 0 chr3R 8440887 8440911 -19464142 + AT_rich Low_complexity Low_complexity 1 24 0 4 649 35 24 0 0 chr3R 8446738 8446780 -19458273 + AT_rich Low_complexity Low_complexity 1 42 0 4 649 185 0 0 39 chr3R 8447149 8447175 -19457878 + (CGG)n Simple_repeat Simple_repeat 2 26 0 4 649 218 130 18 53 chr3R 8448446 8448503 -19456550 + CT-rich Low_complexity Low_complexity 2 56 0 4 649 333 100 0 0 chr3R 8454373 8454423 -19450630 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 649 185 100 39 39 chr3R 8455477 8455529 -19449524 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 4 649 21 36 0 0 chr3R 8456060 8456088 -19448965 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 41 58 0 0 chr3R 8456204 8456273 -19448780 + AT_rich Low_complexity Low_complexity 1 69 0 4 649 22 56 0 0 chr3R 8461468 8461504 -19443549 + AT_rich Low_complexity Low_complexity 1 36 0 4 649 22 35 0 0 chr3R 8463678 8463707 -19441346 + AT_rich Low_complexity Low_complexity 1 29 0 4 649 28 0 0 0 chr3R 8464135 8464163 -19440890 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 22 0 0 0 chr3R 8465897 8465919 -19439134 + AT_rich Low_complexity Low_complexity 1 22 0 4 649 27 0 0 0 chr3R 8469865 8469892 -19435161 + AT_rich Low_complexity Low_complexity 1 27 0 4 649 247 222 0 0 chr3R 8473686 8473749 -19431304 + ROO_I LTR Pao 667 729 -7527 4 649 27 49 0 0 chr3R 8476316 8476357 -19428696 + AT_rich Low_complexity Low_complexity 1 41 0 4 649 249 254 0 0 chr3R 8480155 8480222 -19424831 + CT-rich Low_complexity Low_complexity 2 68 0 4 649 21 36 0 0 chr3R 8486623 8486651 -19418402 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 25 31 0 0 chr3R 8486658 8486690 -19418363 + AT_rich Low_complexity Low_complexity 1 32 0 4 649 206 240 0 0 chr3R 8488460 8488510 -19416543 + (TCTCTG)n Simple_repeat Simple_repeat 2 51 0 4 649 266 0 29 0 chr3R 8493813 8493847 -19411206 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 649 22 56 0 0 chr3R 8496631 8496667 -19408386 + AT_rich Low_complexity Low_complexity 1 36 0 4 649 24 53 0 0 chr3R 8499634 8499672 -19405381 + AT_rich Low_complexity Low_complexity 1 38 0 4 649 255 60 39 20 chr3R 8502262 8502313 -19402740 + (TTA)n Simple_repeat Simple_repeat 2 53 0 4 649 271 133 364 26 chr3R 8507781 8507858 -19397195 + DNAREP1_DM LINE Penelope 430 532 -62 4 649 27 0 0 0 chr3R 8507918 8507945 -19397108 + AT_rich Low_complexity Low_complexity 1 27 0 4 649 22 56 0 0 chr3R 8510495 8510531 -19394522 + AT_rich Low_complexity Low_complexity 1 36 0 4 649 24 32 0 0 chr3R 8512889 8512920 -19392133 + AT_rich Low_complexity Low_complexity 1 31 0 4 649 24 53 0 0 chr3R 8517295 8517333 -19387720 + AT_rich Low_complexity Low_complexity 1 38 0 4 650 203 156 0 0 chr3R 8527995 8528027 -19377026 + (TGAG)n Simple_repeat Simple_repeat 3 34 0 4 650 232 160 51 39 chr3R 8545920 8545998 -19359055 + (TTATA)n Simple_repeat Simple_repeat 5 83 0 4 650 23 54 0 0 chr3R 8547644 8547681 -19357372 + AT_rich Low_complexity Low_complexity 1 37 0 4 650 30 0 0 0 chr3R 8549548 8549578 -19355475 + AT_rich Low_complexity Low_complexity 1 30 0 4 650 24 0 0 0 chr3R 8551306 8551330 -19353723 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 30 0 0 0 chr3R 8551394 8551424 -19353629 + AT_rich Low_complexity Low_complexity 1 30 0 4 650 21 0 0 0 chr3R 8552285 8552306 -19352747 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 240 35 0 0 chr3R 8556446 8556475 -19348578 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 650 222 128 0 0 chr3R 8557131 8557170 -19347883 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 4 650 28 0 0 0 chr3R 8558023 8558051 -19347002 + AT_rich Low_complexity Low_complexity 1 28 0 4 650 29 0 0 0 chr3R 8561058 8561087 -19343966 + AT_rich Low_complexity Low_complexity 1 29 0 4 650 23 0 0 0 chr3R 8561722 8561745 -19343308 + AT_rich Low_complexity Low_complexity 1 23 0 4 650 687 164 132 0 chr3R 8562949 8563108 -19341945 - XDMR Unknown Unknown -135 226 47 4 650 594 183 172 0 chr3R 8563101 8563270 -19341783 - XDMR Unknown Unknown -163 198 1 4 650 899 183 23 19 chr3R 8563240 8563537 -19341516 - XDMR Unknown Unknown 0 360 55 4 650 25 0 0 0 chr3R 8567675 8567700 -19337353 + AT_rich Low_complexity Low_complexity 1 25 0 4 650 22 70 0 0 chr3R 8567711 8567754 -19337299 + AT_rich Low_complexity Low_complexity 1 43 0 4 650 22 0 0 0 chr3R 8569667 8569689 -19335364 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 21 0 0 0 chr3R 8571580 8571601 -19333452 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 29 28 0 0 chr3R 8573102 8573138 -19331915 + AT_rich Low_complexity Low_complexity 1 36 0 4 650 22 56 0 0 chr3R 8575678 8575714 -19329339 + AT_rich Low_complexity Low_complexity 1 36 0 4 650 198 0 0 0 chr3R 8576052 8576074 -19328979 + (CTG)n Simple_repeat Simple_repeat 3 24 0 4 650 22 0 0 0 chr3R 8578052 8578074 -19326979 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 21 0 0 0 chr3R 8578464 8578485 -19326568 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 23 97 0 0 chr3R 8579422 8579494 -19325559 + AT_rich Low_complexity Low_complexity 1 72 0 4 650 24 32 0 0 chr3R 8581204 8581235 -19323818 + AT_rich Low_complexity Low_complexity 1 31 0 4 650 309 140 0 0 chr3R 8583114 8583171 -19321882 + (CAGA)n Simple_repeat Simple_repeat 3 59 0 4 650 23 0 0 0 chr3R 8585787 8585810 -19319243 + AT_rich Low_complexity Low_complexity 1 23 0 4 650 28 61 0 0 chr3R 8590368 8590417 -19314636 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 195 42 0 0 chr3R 8591668 8591692 -19313361 + (AGATG)n Simple_repeat Simple_repeat 1 24 0 4 650 36 0 0 0 chr3R 8592051 8592087 -19312966 + AT_rich Low_complexity Low_complexity 1 36 0 4 650 234 0 0 0 chr3R 8593277 8593303 -19311750 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 650 273 248 17 50 chr3R 8593455 8593574 -19311479 + (CAA)n Simple_repeat Simple_repeat 3 117 0 4 650 37 52 0 0 chr3R 8593774 8593832 -19311221 + AT_rich Low_complexity Low_complexity 1 58 0 4 650 27 0 0 0 chr3R 8594348 8594375 -19310678 + AT_rich Low_complexity Low_complexity 1 27 0 4 650 26 0 0 0 chr3R 8594558 8594584 -19310469 + AT_rich Low_complexity Low_complexity 1 26 0 4 650 21 82 0 0 chr3R 8595359 8595408 -19309645 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 246 62 0 0 chr3R 8597341 8597373 -19307680 + (TCCTG)n Simple_repeat Simple_repeat 5 36 0 4 650 42 20 0 0 chr3R 8605378 8605427 -19299626 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 464 31 0 0 chr3R 8606046 8606110 -19298943 + BS LINE Jockey 5060 5123 -3 4 650 24 0 0 0 chr3R 8606644 8606668 -19298385 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 210 174 0 0 chr3R 8607113 8607159 -19297894 + (CAT)n Simple_repeat Simple_repeat 1 46 0 4 650 23 54 0 0 chr3R 8607620 8607657 -19297396 + AT_rich Low_complexity Low_complexity 1 37 0 4 650 222 37 0 0 chr3R 8607775 8607802 -19297251 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 4 650 48 32 0 0 chr3R 8608465 8608527 -19296526 + AT_rich Low_complexity Low_complexity 1 62 0 4 650 22 0 0 0 chr3R 8611714 8611736 -19293317 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 186 143 0 0 chr3R 8613970 8614005 -19291048 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 650 25 31 0 0 chr3R 8617046 8617078 -19287975 + AT_rich Low_complexity Low_complexity 1 32 0 4 650 23 0 0 0 chr3R 8617325 8617348 -19287705 + AT_rich Low_complexity Low_complexity 1 23 0 4 650 21 0 0 0 chr3R 8617503 8617524 -19287529 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 28 79 0 0 chr3R 8620335 8620398 -19284655 + AT_rich Low_complexity Low_complexity 1 63 0 4 650 21 82 0 0 chr3R 8624075 8624124 -19280929 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 34 42 0 0 chr3R 8628238 8628286 -19276767 + AT_rich Low_complexity Low_complexity 1 48 0 4 650 24 0 0 0 chr3R 8630087 8630111 -19274942 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 24 0 0 0 chr3R 8630186 8630210 -19274843 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 24 77 0 0 chr3R 8634152 8634204 -19270849 + AT_rich Low_complexity Low_complexity 1 52 0 4 650 21 0 0 0 chr3R 8634981 8635002 -19270051 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 226 330 0 0 chr3R 8635752 8635855 -19269198 + (CA)n Simple_repeat Simple_repeat 1 103 0 4 650 22 0 0 0 chr3R 8636664 8636686 -19268367 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 30 59 0 0 chr3R 8637504 8637555 -19267498 + AT_rich Low_complexity Low_complexity 1 51 0 4 650 22 0 0 0 chr3R 8640587 8640609 -19264444 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 22 0 0 0 chr3R 8644979 8645001 -19260052 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 202 211 0 0 chr3R 8645440 8645478 -19259575 + (ATGGTG)n Simple_repeat Simple_repeat 1 38 0 4 650 770 181 80 23 chr3R 8647060 8647235 -19257818 - DNAREP1_DM LINE Penelope -1 593 409 4 650 424 100 0 0 chr3R 8647239 8647299 -19257754 - DNAREP1_DM LINE Penelope -534 60 1 4 651 220 260 13 0 chr3R 8652290 8652367 -19252686 + (TGAG)n Simple_repeat Simple_repeat 2 79 0 4 651 205 175 50 0 chr3R 8652481 8652521 -19252532 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 4 651 22 0 0 0 chr3R 8653795 8653817 -19251236 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 24 32 0 0 chr3R 8655022 8655053 -19250000 + AT_rich Low_complexity Low_complexity 1 31 0 4 651 204 235 0 0 chr3R 8656676 8656744 -19248309 + CT-rich Low_complexity Low_complexity 3 70 0 4 651 22 0 0 0 chr3R 8658836 8658858 -19246195 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 23 0 0 0 chr3R 8660410 8660433 -19244620 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 23 33 0 0 chr3R 8664174 8664204 -19240849 + AT_rich Low_complexity Low_complexity 1 30 0 4 651 21 89 0 0 chr3R 8667473 8667529 -19237524 + AT_rich Low_complexity Low_complexity 1 56 0 4 651 28 71 0 0 chr3R 8667626 8667682 -19237371 + AT_rich Low_complexity Low_complexity 1 56 0 4 651 252 122 0 0 chr3R 8667795 8667836 -19237217 + (CTAA)n Simple_repeat Simple_repeat 1 41 0 4 651 27 0 0 0 chr3R 8668835 8668862 -19236191 + AT_rich Low_complexity Low_complexity 1 27 0 4 651 28 0 0 0 chr3R 8671743 8671771 -19233282 + AT_rich Low_complexity Low_complexity 1 28 0 4 651 201 74 0 0 chr3R 8672263 8672290 -19232763 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 651 21 0 0 0 chr3R 8672642 8672663 -19232390 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 291 93 0 0 chr3R 8675097 8675140 -19229913 + (CTG)n Simple_repeat Simple_repeat 2 44 0 4 651 21 36 0 0 chr3R 8676059 8676087 -19228966 + AT_rich Low_complexity Low_complexity 1 28 0 4 651 43 71 0 0 chr3R 8678334 8678419 -19226634 + AT_rich Low_complexity Low_complexity 1 85 0 4 651 21 0 0 0 chr3R 8679442 8679463 -19225590 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 23 86 0 0 chr3R 8679669 8679727 -19225326 + AT_rich Low_complexity Low_complexity 1 58 0 4 651 27 0 0 0 chr3R 8680194 8680221 -19224832 + AT_rich Low_complexity Low_complexity 1 27 0 4 651 229 208 0 0 chr3R 8684348 8684401 -19220652 + T-rich Low_complexity Low_complexity 1 53 0 4 651 42 20 0 0 chr3R 8689210 8689259 -19215794 + AT_rich Low_complexity Low_complexity 1 49 0 4 651 54 16 0 0 chr3R 8690264 8690325 -19214728 + AT_rich Low_complexity Low_complexity 1 61 0 4 651 3742 2 0 0 chr3R 8690338 8690766 -19214287 + ROO_LTR LTR Pao 1 428 0 4 651 22 0 0 0 chr3R 8690778 8690800 -19214253 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 21 71 0 0 chr3R 8690841 8690883 -19214170 + AT_rich Low_complexity Low_complexity 1 42 0 4 651 31 0 0 0 chr3R 8691521 8691552 -19213501 + AT_rich Low_complexity Low_complexity 1 31 0 4 651 25 0 0 0 chr3R 8698232 8698257 -19206796 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 201 262 16 16 chr3R 8700762 8700824 -19204229 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 651 22 56 0 0 chr3R 8702659 8702695 -19202358 + AT_rich Low_complexity Low_complexity 1 36 0 4 651 23 0 0 0 chr3R 8705469 8705492 -19199561 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 219 143 30 45 chr3R 8707576 8707642 -19197411 + (TAAA)n Simple_repeat Simple_repeat 1 65 0 4 651 189 74 0 0 chr3R 8709114 8709141 -19195912 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 651 23 0 0 0 chr3R 8714635 8714658 -19190395 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 21 0 0 0 chr3R 8716420 8716441 -19188612 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 23 33 0 0 chr3R 8716500 8716530 -19188523 + AT_rich Low_complexity Low_complexity 1 30 0 4 651 21 0 0 0 chr3R 8718160 8718181 -19186872 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 23 0 0 0 chr3R 8718944 8718967 -19186086 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 21 57 0 0 chr3R 8719045 8719080 -19185973 + AT_rich Low_complexity Low_complexity 1 35 0 4 651 250 235 61 75 chr3R 8721525 8721672 -19183381 + DNAREP1_DM LINE Penelope 9 153 -441 4 651 370 237 69 86 chr3R 8721682 8721857 -19183196 + DNAREP1_DM LINE Penelope 341 512 -82 4 651 25 0 0 0 chr3R 8721857 8721882 -19183171 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 198 143 0 0 chr3R 8723606 8723641 -19181412 + (CAG)n Simple_repeat Simple_repeat 1 35 0 4 651 198 0 0 0 chr3R 8725163 8725185 -19179868 + (A)n Simple_repeat Simple_repeat 1 22 0 4 651 21 0 0 0 chr3R 8725194 8725215 -19179838 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 21 0 0 0 chr3R 8727828 8727849 -19177204 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 24 0 0 0 chr3R 8729788 8729812 -19175241 + AT_rich Low_complexity Low_complexity 1 24 0 4 651 198 91 0 0 chr3R 8731521 8731554 -19173499 + (CTG)n Simple_repeat Simple_repeat 1 33 0 4 651 35 78 0 0 chr3R 8731808 8731885 -19173168 + AT_rich Low_complexity Low_complexity 1 77 0 4 651 262 194 0 27 chr3R 8734855 8734929 -19170124 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 651 23 54 0 0 chr3R 8737081 8737118 -19167935 + AT_rich Low_complexity Low_complexity 1 37 0 4 651 273 167 0 0 chr3R 8737467 8737527 -19167526 + ROO_I LTR Pao 682 741 -7515 4 651 2260 0 4 0 chr3R 8745929 8746204 -19158849 - Copia_LTR LTR Copia 0 276 1 4 651 39239 1 0 0 chr3R 8746204 8750799 -19154254 - Copia_I LTR Copia 0 4593 1 4 651 2260 0 4 0 chr3R 8750799 8751074 -19153979 - Copia_LTR LTR Copia 0 276 1 4 651 273 118 0 0 chr3R 8751520 8751571 -19153482 + (T)n Simple_repeat Simple_repeat 1 51 0 4 651 273 259 0 0 chr3R 8753339 8753420 -19151633 - ROO_I LTR Pao -7524 732 652 4 651 35 24 0 0 chr3R 8754960 8755002 -19150051 + AT_rich Low_complexity Low_complexity 1 42 0 4 651 25 0 0 0 chr3R 8755204 8755229 -19149824 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 204 40 0 0 chr3R 8756506 8756531 -19148522 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 651 183 100 0 0 chr3R 8758330 8758360 -19146693 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 651 22 0 0 0 chr3R 8758641 8758663 -19146390 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 22 0 0 0 chr3R 8759037 8759059 -19145994 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 27 29 0 0 chr3R 8759763 8759797 -19145256 + AT_rich Low_complexity Low_complexity 1 34 0 4 651 21 0 0 0 chr3R 8761201 8761222 -19143831 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 21 57 0 0 chr3R 8761286 8761321 -19143732 + AT_rich Low_complexity Low_complexity 1 35 0 4 651 251 214 0 0 chr3R 8762413 8762469 -19142584 + GA-rich Low_complexity Low_complexity 1 56 0 4 651 180 77 0 0 chr3R 8763286 8763312 -19141741 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 651 26 30 0 0 chr3R 8763661 8763694 -19141359 + AT_rich Low_complexity Low_complexity 1 33 0 4 651 25 0 0 0 chr3R 8764655 8764680 -19140373 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 27 29 0 0 chr3R 8768562 8768596 -19136457 + AT_rich Low_complexity Low_complexity 1 34 0 4 651 21 0 0 0 chr3R 8768755 8768776 -19136277 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 29 60 0 0 chr3R 8770431 8770481 -19134572 + AT_rich Low_complexity Low_complexity 1 50 0 4 651 24 53 0 0 chr3R 8772271 8772309 -19132744 + AT_rich Low_complexity Low_complexity 1 38 0 4 651 27 49 0 0 chr3R 8772331 8772372 -19132681 + AT_rich Low_complexity Low_complexity 1 41 0 4 651 239 182 18 18 chr3R 8775457 8775513 -19129540 + (CAG)n Simple_repeat Simple_repeat 3 58 0 4 651 216 0 0 0 chr3R 8777018 8777042 -19128011 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 651 231 114 0 0 chr3R 8779696 8779731 -19125322 + (TGGA)n Simple_repeat Simple_repeat 1 35 0 4 651 216 163 0 0 chr3R 8781428 8781471 -19123582 + (CAGC)n Simple_repeat Simple_repeat 1 43 0 4 651 189 107 0 0 chr3R 8781664 8781692 -19123361 + (CCGAA)n Simple_repeat Simple_repeat 3 30 0 4 652 342 0 0 0 chr3R 8781942 8781980 -19123073 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 652 212 254 17 0 chr3R 8783220 8783279 -19121774 + (CAG)n Simple_repeat Simple_repeat 3 62 0 4 652 28 29 0 0 chr3R 8786683 8786718 -19118335 + AT_rich Low_complexity Low_complexity 1 35 0 4 652 31 26 0 0 chr3R 8792829 8792867 -19112186 + AT_rich Low_complexity Low_complexity 1 38 0 4 652 207 200 0 0 chr3R 8795502 8795547 -19109506 + (TGG)n Simple_repeat Simple_repeat 1 45 0 4 652 21 57 0 0 chr3R 8800356 8800391 -19104662 + AT_rich Low_complexity Low_complexity 1 35 0 4 652 24 0 0 0 chr3R 8800444 8800468 -19104585 + AT_rich Low_complexity Low_complexity 1 24 0 4 652 21 0 0 0 chr3R 8805224 8805245 -19099808 + AT_rich Low_complexity Low_complexity 1 21 0 4 652 24 32 0 0 chr3R 8808331 8808362 -19096691 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 24 32 0 0 chr3R 8809335 8809366 -19095687 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 24 0 0 0 chr3R 8811295 8811319 -19093734 + AT_rich Low_complexity Low_complexity 1 24 0 4 652 23 54 0 0 chr3R 8813083 8813120 -19091933 + AT_rich Low_complexity Low_complexity 1 37 0 4 652 250 159 14 14 chr3R 8816789 8816859 -19088194 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 652 221 299 0 0 chr3R 8824068 8824135 -19080918 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 652 46 19 0 0 chr3R 8826729 8826782 -19078271 + AT_rich Low_complexity Low_complexity 1 53 0 4 652 24 0 0 0 chr3R 8827908 8827932 -19077121 + AT_rich Low_complexity Low_complexity 1 24 0 4 652 244 145 182 13 chr3R 8827975 8828052 -19077001 - G6_DM LINE Jockey -19 2023 1934 4 652 255 177 0 0 chr3R 8830121 8830183 -19074870 + (CAG)n Simple_repeat Simple_repeat 3 64 0 4 652 270 0 0 0 chr3R 8832600 8832630 -19072423 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 652 261 57 0 0 chr3R 8833080 8833115 -19071938 + (A)n Simple_repeat Simple_repeat 1 35 0 4 652 23 0 0 0 chr3R 8835825 8835848 -19069205 + AT_rich Low_complexity Low_complexity 1 23 0 4 652 216 209 0 0 chr3R 8837862 8837905 -19067148 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 652 189 139 0 0 chr3R 8838053 8838096 -19066957 + (TGAG)n Simple_repeat Simple_repeat 2 44 0 4 652 194 174 0 21 chr3R 8838837 8838884 -19066169 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 652 204 40 0 0 chr3R 8840330 8840355 -19064698 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 652 180 0 0 0 chr3R 8840481 8840501 -19064552 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 652 206 62 31 0 chr3R 8841643 8841675 -19063378 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 652 214 195 0 0 chr3R 8843308 8843349 -19061704 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 652 270 125 0 0 chr3R 8843533 8843581 -19061472 + (T)n Simple_repeat Simple_repeat 1 48 0 4 652 207 146 0 0 chr3R 8844954 8844995 -19060058 + (T)n Simple_repeat Simple_repeat 1 41 0 4 652 219 88 0 0 chr3R 8847441 8847475 -19057578 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 652 278 132 39 13 chr3R 8847551 8847628 -19057425 + (CA)n Simple_repeat Simple_repeat 2 80 0 4 652 447 134 0 0 chr3R 8847795 8847877 -19057176 + (TA)n Simple_repeat Simple_repeat 1 82 0 4 652 198 71 0 0 chr3R 8848800 8848828 -19056225 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 652 333 259 9 18 chr3R 8849459 8849573 -19055480 + (CA)n Simple_repeat Simple_repeat 1 113 0 4 652 249 214 0 0 chr3R 8849830 8849886 -19055167 + A-rich Low_complexity Low_complexity 1 56 0 4 652 261 0 0 0 chr3R 8850398 8850427 -19054626 + (CCAA)n Simple_repeat Simple_repeat 3 31 0 4 652 226 266 16 0 chr3R 8850649 8850713 -19054340 + (CCG)n Simple_repeat Simple_repeat 3 67 0 4 652 192 40 0 0 chr3R 8851305 8851330 -19053723 + (GGA)n Simple_repeat Simple_repeat 2 26 0 4 652 213 65 0 115 chr3R 8851884 8851936 -19053117 + A-rich Low_complexity Low_complexity 5 50 0 4 652 202 29 57 0 chr3R 8852255 8852290 -19052763 + (TATAG)n Simple_repeat Simple_repeat 4 40 0 4 652 22 0 0 0 chr3R 8854761 8854783 -19050270 + AT_rich Low_complexity Low_complexity 1 22 0 4 652 22 80 0 0 chr3R 8862160 8862210 -19042843 + AT_rich Low_complexity Low_complexity 1 50 0 4 652 25 0 0 0 chr3R 8863574 8863599 -19041454 + AT_rich Low_complexity Low_complexity 1 25 0 4 652 36 82 0 0 chr3R 8865831 8865916 -19039137 + AT_rich Low_complexity Low_complexity 1 85 0 4 652 24 32 0 0 chr3R 8869411 8869442 -19035611 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 35 24 0 0 chr3R 8869574 8869616 -19035437 + AT_rich Low_complexity Low_complexity 1 42 0 4 652 24 32 0 0 chr3R 8869763 8869794 -19035259 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 28 29 0 0 chr3R 8870146 8870181 -19034872 + AT_rich Low_complexity Low_complexity 1 35 0 4 652 25 31 0 0 chr3R 8870279 8870311 -19034742 + AT_rich Low_complexity Low_complexity 1 32 0 4 652 30 0 0 0 chr3R 8874768 8874798 -19030255 + AT_rich Low_complexity Low_complexity 1 30 0 4 652 29 0 0 0 chr3R 8875379 8875408 -19029645 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 30 27 0 0 chr3R 8877478 8877515 -19027538 + AT_rich Low_complexity Low_complexity 1 37 0 4 652 23 0 0 0 chr3R 8882422 8882445 -19022608 + AT_rich Low_complexity Low_complexity 1 23 0 4 652 350 108 15 0 chr3R 8883375 8883440 -19021613 + (CTG)n Simple_repeat Simple_repeat 3 68 0 4 652 218 176 39 0 chr3R 8883538 8883589 -19021464 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 652 31 0 0 0 chr3R 8883626 8883657 -19021396 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 21 0 0 0 chr3R 8885733 8885754 -19019299 + AT_rich Low_complexity Low_complexity 1 21 0 4 652 29 0 0 0 chr3R 8888603 8888632 -19016421 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 22 35 0 0 chr3R 8889162 8889191 -19015862 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 218 56 28 0 chr3R 8889755 8889791 -19015262 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 652 192 40 0 0 chr3R 8890183 8890208 -19014845 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 652 189 0 0 0 chr3R 8890910 8890931 -19014122 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 4 652 22 99 0 0 chr3R 8891725 8891796 -19013257 + AT_rich Low_complexity Low_complexity 1 71 0 4 652 273 247 24 0 chr3R 8892532 8892617 -19012436 + (TTG)n Simple_repeat Simple_repeat 1 87 0 4 652 27 62 0 0 chr3R 8892773 8892821 -19012232 + AT_rich Low_complexity Low_complexity 1 48 0 4 652 186 133 0 0 chr3R 8893767 8893797 -19011256 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 652 27 29 0 0 chr3R 8894575 8894609 -19010444 + AT_rich Low_complexity Low_complexity 1 34 0 4 652 27 92 0 0 chr3R 8896628 8896704 -19008349 + AT_rich Low_complexity Low_complexity 1 76 0 4 652 23 33 0 0 chr3R 8897313 8897343 -19007710 + AT_rich Low_complexity Low_complexity 1 30 0 4 652 216 0 0 0 chr3R 8899072 8899096 -19005957 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 652 208 143 0 0 chr3R 8899179 8899214 -19005839 + (TTGG)n Simple_repeat Simple_repeat 4 38 0 4 652 29 0 0 0 chr3R 8900235 8900264 -19004789 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 255 103 0 0 chr3R 8900451 8900490 -19004563 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 652 209 288 0 40 chr3R 8902615 8902691 -19002362 + (CAG)n Simple_repeat Simple_repeat 2 74 0 4 652 210 91 0 0 chr3R 8903109 8903142 -19001911 + (CAG)n Simple_repeat Simple_repeat 3 35 0 4 652 24 53 0 0 chr3R 8904404 8904442 -19000611 + AT_rich Low_complexity Low_complexity 1 38 0 4 652 21 100 0 0 chr3R 8905848 8905918 -18999135 + AT_rich Low_complexity Low_complexity 1 70 0 4 652 210 37 0 0 chr3R 8906699 8906726 -18998327 + (A)n Simple_repeat Simple_repeat 1 27 0 4 652 201 179 0 51 chr3R 8909428 8909487 -18995566 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 4 652 27 49 0 0 chr3R 8911143 8911184 -18993869 + AT_rich Low_complexity Low_complexity 1 41 0 4 653 279 146 0 0 chr3R 8912904 8912959 -18992094 + (CAGT)n Simple_repeat Simple_repeat 4 58 0 4 653 26 30 0 0 chr3R 8916752 8916785 -18988268 + AT_rich Low_complexity Low_complexity 1 33 0 4 653 207 170 0 0 chr3R 8918141 8918188 -18986865 + (TCCA)n Simple_repeat Simple_repeat 1 47 0 4 653 207 69 0 0 chr3R 8918323 8918352 -18986701 + (TTTAA)n Simple_repeat Simple_repeat 4 32 0 4 653 288 137 0 0 chr3R 8920645 8920696 -18984357 + (TTGG)n Simple_repeat Simple_repeat 4 54 0 4 653 24 0 0 0 chr3R 8921271 8921295 -18983758 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 22 35 0 0 chr3R 8923879 8923908 -18981145 + AT_rich Low_complexity Low_complexity 1 29 0 4 653 23 33 0 0 chr3R 8924471 8924501 -18980552 + AT_rich Low_complexity Low_complexity 1 30 0 4 653 25 65 0 0 chr3R 8927505 8927551 -18977502 + AT_rich Low_complexity Low_complexity 1 46 0 4 653 25 31 0 0 chr3R 8927739 8927771 -18977282 + AT_rich Low_complexity Low_complexity 1 32 0 4 653 25 0 0 0 chr3R 8929115 8929140 -18975913 + AT_rich Low_complexity Low_complexity 1 25 0 4 653 189 107 0 0 chr3R 8929627 8929655 -18975398 + (CCA)n Simple_repeat Simple_repeat 1 28 0 4 653 22 0 0 0 chr3R 8929757 8929779 -18975274 + AT_rich Low_complexity Low_complexity 1 22 0 4 653 292 98 0 0 chr3R 8931273 8931314 -18973739 + DNAREP1_DM LINE Penelope 1 41 -553 4 653 23 0 0 0 chr3R 8932108 8932131 -18972922 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 24 0 0 0 chr3R 8932265 8932289 -18972764 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 32 0 0 0 chr3R 8934325 8934357 -18970696 + AT_rich Low_complexity Low_complexity 1 32 0 4 653 180 77 0 0 chr3R 8935135 8935161 -18969892 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 4 653 186 43 0 0 chr3R 8936231 8936254 -18968799 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 4 653 22 35 0 0 chr3R 8937808 8937837 -18967216 + AT_rich Low_complexity Low_complexity 1 29 0 4 653 22 56 0 0 chr3R 8939016 8939052 -18966001 + AT_rich Low_complexity Low_complexity 1 36 0 4 653 223 237 25 0 chr3R 8943005 8943080 -18961973 + A-rich Low_complexity Low_complexity 1 76 0 4 653 207 69 0 0 chr3R 8943415 8943444 -18961609 + (TAAAA)n Simple_repeat Simple_repeat 4 32 0 4 653 22 56 0 0 chr3R 8946104 8946140 -18958913 + AT_rich Low_complexity Low_complexity 1 36 0 4 653 21 57 0 0 chr3R 8947925 8947960 -18957093 + AT_rich Low_complexity Low_complexity 1 35 0 4 653 304 259 11 11 chr3R 8953419 8953509 -18951544 + (CTG)n Simple_repeat Simple_repeat 3 92 0 4 653 284 196 42 67 chr3R 8953518 8953638 -18951415 - ROO_I LTR Pao -7530 726 610 4 653 233 218 0 0 chr3R 8955365 8955420 -18949633 + (CTG)n Simple_repeat Simple_repeat 1 55 0 4 653 28 0 0 0 chr3R 8956162 8956190 -18948863 + AT_rich Low_complexity Low_complexity 1 28 0 4 653 22 0 0 0 chr3R 8958128 8958150 -18946903 + AT_rich Low_complexity Low_complexity 1 22 0 4 653 19528 1 1 1 chr3R 8961602 8963722 -18941331 + POGO DNA Pogo 1 2121 0 4 653 21 0 0 0 chr3R 8963740 8963761 -18941292 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 230 207 0 33 chr3R 8964868 8964928 -18940125 + T-rich Low_complexity Low_complexity 4 61 0 4 653 23 0 0 0 chr3R 8966354 8966377 -18938676 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 21 0 0 0 chr3R 8967232 8967253 -18937800 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 228 111 0 0 chr3R 8967343 8967379 -18937674 + (CCGAA)n Simple_repeat Simple_repeat 1 36 0 4 653 23 54 0 0 chr3R 8967747 8967784 -18937269 + AT_rich Low_complexity Low_complexity 1 37 0 4 653 2452 4 0 0 chr3R 8968809 8969076 -18935977 - MDG3_LTR LTR Gypsy 0 267 1 4 653 45910 0 0 0 chr3R 8969076 8974063 -18930990 - MDG3_I LTR Gypsy 0 4986 1 4 653 2452 4 0 0 chr3R 8974062 8974329 -18930724 - MDG3_LTR LTR Gypsy 0 267 1 4 653 22 0 0 0 chr3R 8974706 8974728 -18930325 + AT_rich Low_complexity Low_complexity 1 22 0 4 653 21 0 0 0 chr3R 8978258 8978279 -18926774 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 21 0 0 0 chr3R 8979582 8979603 -18925450 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 227 175 0 17 chr3R 8980552 8980610 -18924443 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 653 24 0 0 0 chr3R 8984848 8984872 -18920181 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 23 0 0 0 chr3R 8990362 8990385 -18914668 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 186 43 0 0 chr3R 8990872 8990895 -18914158 + (CAATT)n Simple_repeat Simple_repeat 2 24 0 4 653 25 0 0 0 chr3R 8996981 8997006 -18908047 + AT_rich Low_complexity Low_complexity 1 25 0 4 653 330 26 0 0 chr3R 8999060 8999099 -18905954 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 653 21 71 0 0 chr3R 8999470 8999512 -18905541 + AT_rich Low_complexity Low_complexity 1 42 0 4 653 246 164 0 0 chr3R 8999660 8999715 -18905338 + (TTG)n Simple_repeat Simple_repeat 3 57 0 4 653 21 36 0 0 chr3R 9001118 9001146 -18903907 + AT_rich Low_complexity Low_complexity 1 28 0 4 653 22 35 0 0 chr3R 9002697 9002726 -18902327 + AT_rich Low_complexity Low_complexity 1 29 0 4 653 21 0 0 0 chr3R 9002786 9002807 -18902246 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 249 197 0 0 chr3R 9003195 9003256 -18901797 + (CAGC)n Simple_repeat Simple_repeat 2 62 0 4 653 21 0 0 0 chr3R 9009581 9009602 -18895451 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 21 36 0 0 chr3R 9011256 9011284 -18893769 + AT_rich Low_complexity Low_complexity 1 28 0 4 653 228 167 0 0 chr3R 9018967 9019015 -18886038 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 653 25 0 0 0 chr3R 9019919 9019944 -18885109 + AT_rich Low_complexity Low_complexity 1 25 0 4 653 24 0 0 0 chr3R 9020426 9020450 -18884603 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 423 0 0 0 chr3R 9027543 9027590 -18877463 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 653 246 143 0 0 chr3R 9034940 9034989 -18870064 + (CTG)n Simple_repeat Simple_repeat 1 49 0 4 653 21 95 0 0 chr3R 9035644 9035707 -18869346 + AT_rich Low_complexity Low_complexity 1 63 0 4 653 21 0 0 0 chr3R 9036241 9036262 -18868791 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 27 0 0 0 chr3R 9037643 9037670 -18867383 + AT_rich Low_complexity Low_complexity 1 27 0 4 653 23 0 0 0 chr3R 9039328 9039351 -18865702 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 27 87 0 0 chr3R 9041033 9041102 -18863951 + AT_rich Low_complexity Low_complexity 1 69 0 4 653 22 0 0 0 chr3R 9043267 9043289 -18861764 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 22 70 0 0 chr3R 9044736 9044779 -18860274 + AT_rich Low_complexity Low_complexity 1 43 0 4 654 25 65 0 0 chr3R 9049472 9049518 -18855535 + AT_rich Low_complexity Low_complexity 1 46 0 4 654 23 0 0 0 chr3R 9049561 9049584 -18855469 + AT_rich Low_complexity Low_complexity 1 23 0 4 654 25 31 0 0 chr3R 9050661 9050693 -18854360 + AT_rich Low_complexity Low_complexity 1 32 0 4 654 34 0 0 0 chr3R 9052358 9052392 -18852661 + AT_rich Low_complexity Low_complexity 1 34 0 4 654 214 242 32 0 chr3R 9053309 9053371 -18851682 + (TTTG)n Simple_repeat Simple_repeat 4 67 0 4 654 204 279 0 0 chr3R 9056418 9056486 -18848567 + (CGAAA)n Simple_repeat Simple_repeat 3 70 0 4 654 21 36 0 0 chr3R 9057526 9057554 -18847499 + AT_rich Low_complexity Low_complexity 1 28 0 4 654 33 25 0 0 chr3R 9063615 9063655 -18841398 + AT_rich Low_complexity Low_complexity 1 40 0 4 654 231 203 0 0 chr3R 9064124 9064198 -18840855 + ROO_I LTR Pao 644 717 -7539 4 654 206 219 16 0 chr3R 9064688 9064752 -18840301 + (CAG)n Simple_repeat Simple_repeat 2 66 0 4 654 200 180 20 20 chr3R 9065991 9066042 -18839011 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 654 22 0 0 0 chr3R 9067692 9067714 -18837339 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 195 42 0 0 chr3R 9067748 9067772 -18837281 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 654 183 139 0 0 chr3R 9068584 9068620 -18836433 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 654 225 65 0 0 chr3R 9072730 9072761 -18832292 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 654 27 0 0 0 chr3R 9073305 9073332 -18831721 + AT_rich Low_complexity Low_complexity 1 27 0 4 654 382 38 24 60 chr3R 9075362 9075446 -18829607 + (TTTA)n Simple_repeat Simple_repeat 2 82 0 4 654 23 68 0 0 chr3R 9075541 9075585 -18829468 + AT_rich Low_complexity Low_complexity 1 44 0 4 654 33 43 0 0 chr3R 9077098 9077145 -18827908 + AT_rich Low_complexity Low_complexity 1 47 0 4 654 24 32 0 0 chr3R 9079039 9079070 -18825983 + AT_rich Low_complexity Low_complexity 1 31 0 4 654 264 111 0 0 chr3R 9079680 9079725 -18825328 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 654 23 54 0 0 chr3R 9083396 9083433 -18821620 + AT_rich Low_complexity Low_complexity 1 37 0 4 654 33 43 0 0 chr3R 9085126 9085173 -18819880 + AT_rich Low_complexity Low_complexity 1 47 0 4 654 23 54 0 0 chr3R 9085724 9085761 -18819292 + AT_rich Low_complexity Low_complexity 1 37 0 4 654 22 80 0 0 chr3R 9087904 9087954 -18817099 + AT_rich Low_complexity Low_complexity 1 50 0 4 654 32 26 0 0 chr3R 9092463 9092502 -18812551 + AT_rich Low_complexity Low_complexity 1 39 0 4 654 216 269 0 0 chr3R 9092760 9092827 -18812226 + GA-rich Low_complexity Low_complexity 2 68 0 4 654 25 0 0 0 chr3R 9095716 9095741 -18809312 + AT_rich Low_complexity Low_complexity 1 25 0 4 654 286 244 11 22 chr3R 9098879 9098971 -18806082 + (TGGG)n Simple_repeat Simple_repeat 4 94 0 4 654 195 69 0 0 chr3R 9105020 9105049 -18800004 + (A)n Simple_repeat Simple_repeat 1 29 0 4 654 202 87 21 21 chr3R 9105313 9105360 -18799693 + (CGATA)n Simple_repeat Simple_repeat 3 49 0 4 654 22 0 0 0 chr3R 9110066 9110088 -18794965 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 27 0 0 0 chr3R 9110664 9110691 -18794362 + AT_rich Low_complexity Low_complexity 1 27 0 4 654 32 57 0 0 chr3R 9113553 9113606 -18791447 + AT_rich Low_complexity Low_complexity 1 53 0 4 654 22 70 0 0 chr3R 9125419 9125462 -18779591 + AT_rich Low_complexity Low_complexity 1 43 0 4 654 206 216 0 0 chr3R 9128664 9128715 -18776338 + (CCA)n Simple_repeat Simple_repeat 3 53 0 4 654 28 61 0 0 chr3R 9131397 9131446 -18773607 + AT_rich Low_complexity Low_complexity 1 49 0 4 654 30 0 0 0 chr3R 9132034 9132064 -18772989 + AT_rich Low_complexity Low_complexity 1 30 0 4 654 21 36 0 0 chr3R 9138607 9138635 -18766418 + AT_rich Low_complexity Low_complexity 1 28 0 4 654 209 340 0 0 chr3R 9138644 9138738 -18766315 + (CCA)n Simple_repeat Simple_repeat 3 96 0 4 654 43159 3 1 2 chr3R 9139879 9144600 -18760453 - DOC LINE Jockey -6 4719 5 4 654 401 173 161 0 chr3R 9145431 9145512 -18759541 + DNAREP1_DM LINE Penelope 501 594 0 4 654 22 0 0 0 chr3R 9146701 9146723 -18758330 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 22 94 0 0 chr3R 9146988 9147052 -18758001 + AT_rich Low_complexity Low_complexity 1 64 0 4 654 37 23 0 0 chr3R 9150084 9150128 -18754925 + AT_rich Low_complexity Low_complexity 1 44 0 4 654 21 0 0 0 chr3R 9151317 9151338 -18753715 + AT_rich Low_complexity Low_complexity 1 21 0 4 654 26 74 0 0 chr3R 9158216 9158270 -18746783 + AT_rich Low_complexity Low_complexity 1 54 0 4 654 23 0 0 0 chr3R 9161596 9161619 -18743434 + AT_rich Low_complexity Low_complexity 1 23 0 4 654 31 0 0 0 chr3R 9163880 9163911 -18741142 + AT_rich Low_complexity Low_complexity 1 31 0 4 654 50 0 0 0 chr3R 9165343 9165393 -18739660 + AT_rich Low_complexity Low_complexity 1 50 0 4 654 206 146 24 0 chr3R 9165825 9165866 -18739187 + (GAGTG)n Simple_repeat Simple_repeat 2 43 0 4 654 29 28 0 0 chr3R 9166617 9166653 -18738400 + AT_rich Low_complexity Low_complexity 1 36 0 4 654 195 100 0 0 chr3R 9170009 9170039 -18735014 + (TGG)n Simple_repeat Simple_repeat 1 30 0 4 654 21 0 0 0 chr3R 9172982 9173003 -18732050 + AT_rich Low_complexity Low_complexity 1 21 0 4 654 276 30 0 0 chr3R 9173299 9173332 -18731721 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 655 24 32 0 0 chr3R 9178433 9178464 -18726589 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 21 95 0 0 chr3R 9182332 9182395 -18722658 + AT_rich Low_complexity Low_complexity 1 63 0 4 655 249 33 0 0 chr3R 9182845 9182875 -18722178 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 655 45 0 0 0 chr3R 9186409 9186454 -18718599 + AT_rich Low_complexity Low_complexity 1 45 0 4 655 193 89 0 43 chr3R 9187547 9187594 -18717459 + (TTTAA)n Simple_repeat Simple_repeat 3 47 0 4 655 29 47 0 0 chr3R 9189119 9189162 -18715891 + AT_rich Low_complexity Low_complexity 1 43 0 4 655 26 50 0 0 chr3R 9190301 9190341 -18714712 + AT_rich Low_complexity Low_complexity 1 40 0 4 655 236 238 0 0 chr3R 9190784 9190847 -18714206 + CT-rich Low_complexity Low_complexity 2 64 0 4 655 24 53 0 0 chr3R 9191985 9192023 -18713030 + AT_rich Low_complexity Low_complexity 1 38 0 4 655 21 0 0 0 chr3R 9195036 9195057 -18709996 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 27 29 0 0 chr3R 9197253 9197287 -18707766 + AT_rich Low_complexity Low_complexity 1 34 0 4 655 26 50 0 0 chr3R 9197830 9197870 -18707183 + AT_rich Low_complexity Low_complexity 1 40 0 4 655 21 0 0 0 chr3R 9197947 9197968 -18707085 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 207 69 0 0 chr3R 9198824 9198853 -18706200 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 655 26 0 0 0 chr3R 9200617 9200643 -18704410 + AT_rich Low_complexity Low_complexity 1 26 0 4 655 448 54 0 0 chr3R 9201190 9201246 -18703807 + BARI1 DNA Tc1 40 95 -1655 4 655 1577 121 12 80 chr3R 9201254 9201578 -18703475 + I_DM LINE I 952 1253 -4978 4 655 28 61 0 0 chr3R 9203194 9203243 -18701810 + AT_rich Low_complexity Low_complexity 1 49 0 4 655 22 56 0 0 chr3R 9204565 9204601 -18700452 + AT_rich Low_complexity Low_complexity 1 36 0 4 655 24 32 0 0 chr3R 9208995 9209026 -18696027 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 39 0 0 0 chr3R 9210331 9210370 -18694683 + AT_rich Low_complexity Low_complexity 1 39 0 4 655 230 203 43 0 chr3R 9215259 9215328 -18689725 - ROO_I LTR Pao -7495 761 690 4 655 21 0 0 0 chr3R 9216076 9216097 -18688956 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 22 0 0 0 chr3R 9216788 9216810 -18688243 + AT_rich Low_complexity Low_complexity 1 22 0 4 655 22 35 0 0 chr3R 9220557 9220586 -18684467 + AT_rich Low_complexity Low_complexity 1 29 0 4 655 267 192 0 0 chr3R 9220968 9221046 -18684007 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 655 200 231 0 0 chr3R 9227035 9227074 -18677979 + (CATATA)n Simple_repeat Simple_repeat 1 39 0 4 655 22 56 0 0 chr3R 9230727 9230763 -18674290 + AT_rich Low_complexity Low_complexity 1 36 0 4 655 21 57 0 0 chr3R 9232976 9233011 -18672042 + AT_rich Low_complexity Low_complexity 1 35 0 4 655 22 56 0 0 chr3R 9235267 9235303 -18669750 + AT_rich Low_complexity Low_complexity 1 36 0 4 655 27 0 0 0 chr3R 9241778 9241805 -18663248 + AT_rich Low_complexity Low_complexity 1 27 0 4 655 32 0 0 0 chr3R 9244744 9244776 -18660277 + AT_rich Low_complexity Low_complexity 1 32 0 4 655 201 349 0 39 chr3R 9246705 9246860 -18658193 + GA-rich Low_complexity Low_complexity 2 150 0 4 655 21 0 0 0 chr3R 9247670 9247691 -18657362 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 29 47 0 0 chr3R 9247710 9247753 -18657300 + AT_rich Low_complexity Low_complexity 1 43 0 4 655 21 36 0 0 chr3R 9251299 9251327 -18653726 + AT_rich Low_complexity Low_complexity 1 28 0 4 655 25 31 0 0 chr3R 9252033 9252065 -18652988 + AT_rich Low_complexity Low_complexity 1 32 0 4 655 195 114 0 0 chr3R 9253530 9253565 -18651488 + (CAA)n Simple_repeat Simple_repeat 3 37 0 4 655 225 65 0 0 chr3R 9261605 9261636 -18643417 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 655 210 71 0 0 chr3R 9262026 9262054 -18642999 + (TCCA)n Simple_repeat Simple_repeat 4 31 0 4 655 202 261 0 0 chr3R 9263149 9263195 -18641858 + (CCCCAA)n Simple_repeat Simple_repeat 5 50 0 4 655 24 32 0 0 chr3R 9264051 9264082 -18640971 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 21 0 0 0 chr3R 9264105 9264126 -18640927 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 27 0 0 0 chr3R 9264141 9264168 -18640885 + AT_rich Low_complexity Low_complexity 1 27 0 4 655 24 32 0 0 chr3R 9264319 9264350 -18640703 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 21 0 0 0 chr3R 9268538 9268559 -18636494 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 258 56 0 0 chr3R 9269157 9269193 -18635860 + (TCCA)n Simple_repeat Simple_repeat 4 39 0 4 655 22 35 0 0 chr3R 9270273 9270302 -18634751 + AT_rich Low_complexity Low_complexity 1 29 0 4 655 21 36 0 0 chr3R 9270979 9271007 -18634046 + AT_rich Low_complexity Low_complexity 1 28 0 4 655 298 265 20 0 chr3R 9276306 9276404 -18628649 + (CA)n Simple_repeat Simple_repeat 1 100 0 4 655 198 143 0 0 chr3R 9277742 9277777 -18627276 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 655 21 57 0 0 chr3R 9278574 9278609 -18626444 + AT_rich Low_complexity Low_complexity 1 35 0 4 655 25 95 0 0 chr3R 9281280 9281354 -18623699 + AT_rich Low_complexity Low_complexity 1 74 0 4 655 184 137 19 19 chr3R 9283779 9283831 -18621222 + (TTCCG)n Simple_repeat Simple_repeat 4 55 0 4 655 180 125 0 0 chr3R 9291932 9291964 -18613089 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 655 32 0 0 0 chr3R 9292762 9292794 -18612259 + AT_rich Low_complexity Low_complexity 1 32 0 4 655 22 0 0 0 chr3R 9292988 9293010 -18612043 + AT_rich Low_complexity Low_complexity 1 22 0 4 655 200 211 0 0 chr3R 9293434 9293472 -18611581 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4 655 30 45 0 0 chr3R 9294637 9294681 -18610372 + AT_rich Low_complexity Low_complexity 1 44 0 4 655 180 0 0 0 chr3R 9295774 9295794 -18609259 + (T)n Simple_repeat Simple_repeat 1 20 0 4 655 24 0 0 0 chr3R 9297182 9297206 -18607847 + AT_rich Low_complexity Low_complexity 1 24 0 4 655 40 21 0 0 chr3R 9297344 9297391 -18607662 + AT_rich Low_complexity Low_complexity 1 47 0 4 655 189 107 0 0 chr3R 9298026 9298054 -18606999 + (CAGT)n Simple_repeat Simple_repeat 1 28 0 4 655 205 186 0 0 chr3R 9299466 9299509 -18605544 + A-rich Low_complexity Low_complexity 1 43 0 4 655 207 100 0 0 chr3R 9300009 9300039 -18605014 + (CAG)n Simple_repeat Simple_repeat 3 32 0 4 655 201 139 0 0 chr3R 9305071 9305114 -18599939 + (CTG)n Simple_repeat Simple_repeat 1 43 0 4 656 22 0 0 0 chr3R 9306702 9306724 -18598329 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 237 163 0 0 chr3R 9307799 9307848 -18597205 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 4 656 227 262 0 0 chr3R 9308103 9308164 -18596889 + (CAACT)n Simple_repeat Simple_repeat 1 61 0 4 656 24 32 0 0 chr3R 9308598 9308629 -18596424 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 215 220 0 17 chr3R 9309858 9309918 -18595135 + (CCA)n Simple_repeat Simple_repeat 1 59 0 4 656 200 184 0 0 chr3R 9312749 9312787 -18592266 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 656 23 0 0 0 chr3R 9313370 9313393 -18591660 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 219 69 0 0 chr3R 9315307 9315336 -18589717 + (CTG)n Simple_repeat Simple_repeat 1 29 0 4 656 232 200 0 0 chr3R 9316419 9316474 -18588579 + ROO_I LTR Pao 680 734 -7522 4 656 510 103 0 0 chr3R 9316744 9316822 -18588231 + (CAG)n Simple_repeat Simple_repeat 2 79 0 4 656 210 250 0 0 chr3R 9317617 9317677 -18587376 + (CAT)n Simple_repeat Simple_repeat 3 62 0 4 656 180 152 0 0 chr3R 9318970 9319003 -18586050 + (CAG)n Simple_repeat Simple_repeat 3 35 0 4 656 234 62 0 0 chr3R 9319081 9319113 -18585940 + (A)n Simple_repeat Simple_repeat 1 32 0 4 656 183 156 0 0 chr3R 9319241 9319273 -18585780 + (CAA)n Simple_repeat Simple_repeat 3 34 0 4 656 223 259 0 0 chr3R 9321351 9321405 -18583648 + (CAA)n Simple_repeat Simple_repeat 1 54 0 4 656 270 81 0 0 chr3R 9323523 9323560 -18581493 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 656 206 137 0 56 chr3R 9324299 9324353 -18580700 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 656 210 91 0 0 chr3R 9324653 9324686 -18580367 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 656 195 42 0 0 chr3R 9327696 9327720 -18577333 + (A)n Simple_repeat Simple_repeat 1 24 0 4 656 204 184 0 0 chr3R 9328467 9328516 -18576537 + (CAG)n Simple_repeat Simple_repeat 1 49 0 4 656 23 0 0 0 chr3R 9330352 9330375 -18574678 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 21 0 0 0 chr3R 9330701 9330722 -18574331 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 234 81 0 0 chr3R 9332163 9332200 -18572853 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 656 25 0 0 0 chr3R 9332699 9332724 -18572329 + AT_rich Low_complexity Low_complexity 1 25 0 4 656 22 0 0 0 chr3R 9334554 9334576 -18570477 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 26 64 0 0 chr3R 9334873 9334920 -18570133 + AT_rich Low_complexity Low_complexity 1 47 0 4 656 180 77 0 0 chr3R 9335915 9335941 -18569112 + (CAGGA)n Simple_repeat Simple_repeat 3 28 0 4 656 27 29 0 0 chr3R 9336136 9336170 -18568883 + AT_rich Low_complexity Low_complexity 1 34 0 4 656 234 116 0 0 chr3R 9336892 9336935 -18568118 + (A)n Simple_repeat Simple_repeat 1 43 0 4 656 246 81 0 0 chr3R 9337225 9337262 -18567791 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 4 656 205 171 0 0 chr3R 9339317 9339352 -18565701 + (CACAA)n Simple_repeat Simple_repeat 3 37 0 4 656 273 29 0 0 chr3R 9342130 9342164 -18562889 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 656 270 0 0 0 chr3R 9342719 9342749 -18562304 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 656 21 0 0 0 chr3R 9343000 9343021 -18562032 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 25453 4 0 0 chr3R 9343024 9345756 -18559297 - LINEJ1_DM LINE Jockey 0 5020 2290 4 656 204 167 0 23 chr3R 9346396 9346439 -18558614 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 656 250 253 0 0 chr3R 9346608 9346691 -18558362 + ROO_I LTR Pao 647 729 -7527 4 656 201 94 0 0 chr3R 9347107 9347139 -18557914 + (CTG)n Simple_repeat Simple_repeat 2 33 0 4 656 226 207 0 33 chr3R 9347296 9347356 -18557697 + (CATATA)n Simple_repeat Simple_repeat 4 61 0 4 656 292 244 26 9 chr3R 9347594 9347710 -18557343 + ROO_I LTR Pao 641 758 -7498 4 656 21 0 0 0 chr3R 9347784 9347805 -18557248 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 198 0 0 0 chr3R 9348939 9348961 -18556092 + (CCG)n Simple_repeat Simple_repeat 1 22 0 4 656 21 57 0 0 chr3R 9349688 9349723 -18555330 + AT_rich Low_complexity Low_complexity 1 35 0 4 656 276 170 0 0 chr3R 9350174 9350227 -18554826 + (CAT)n Simple_repeat Simple_repeat 1 53 0 4 656 259 254 0 0 chr3R 9350545 9350612 -18554441 + A-rich Low_complexity Low_complexity 1 67 0 4 656 237 119 0 0 chr3R 9351093 9351135 -18553918 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 656 270 81 0 0 chr3R 9353381 9353418 -18551635 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 656 231 226 0 0 chr3R 9353881 9353934 -18551119 + T-rich Low_complexity Low_complexity 1 53 0 4 656 216 67 0 0 chr3R 9356296 9356326 -18548727 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 656 198 191 0 0 chr3R 9358125 9358172 -18546881 + T-rich Low_complexity Low_complexity 4 50 0 4 656 186 43 0 0 chr3R 9360859 9360882 -18544171 + (T)n Simple_repeat Simple_repeat 1 23 0 4 656 219 36 0 0 chr3R 9362482 9362510 -18542543 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 656 180 77 0 0 chr3R 9362972 9362998 -18542055 + (CAG)n Simple_repeat Simple_repeat 2 27 0 4 656 225 108 0 0 chr3R 9364755 9364792 -18540261 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 656 225 65 0 0 chr3R 9365342 9365373 -18539680 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 656 332 184 0 22 chr3R 9367717 9367806 -18537247 + (CGATG)n Simple_repeat Simple_repeat 4 90 0 4 656 276 100 0 0 chr3R 9368327 9368367 -18536686 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 656 229 61 18 109 chr3R 9369029 9369084 -18535969 + ROO_I LTR Pao 697 746 -7510 4 656 189 107 0 0 chr3R 9371332 9371360 -18533693 + (A)n Simple_repeat Simple_repeat 1 28 0 4 656 201 94 0 0 chr3R 9372335 9372367 -18532686 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 656 209 196 22 0 chr3R 9372560 9372606 -18532447 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 656 28 29 0 0 chr3R 9373980 9374015 -18531038 + AT_rich Low_complexity Low_complexity 1 35 0 4 656 41 48 0 0 chr3R 9374120 9374182 -18530871 + AT_rich Low_complexity Low_complexity 1 62 0 4 656 180 77 0 0 chr3R 9375168 9375194 -18529859 + (CTG)n Simple_repeat Simple_repeat 2 27 0 4 656 260 53 0 26 chr3R 9376014 9376053 -18529000 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 656 28 29 0 0 chr3R 9376203 9376238 -18528815 + AT_rich Low_complexity Low_complexity 1 35 0 4 656 201 39 0 0 chr3R 9380501 9380527 -18524526 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 656 255 177 0 0 chr3R 9380933 9380995 -18524058 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 656 210 162 0 0 chr3R 9382261 9382298 -18522755 + T-rich Low_complexity Low_complexity 1 37 0 4 656 231 88 0 0 chr3R 9382491 9382525 -18522528 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 656 187 156 0 45 chr3R 9383423 9383490 -18521563 + (CCCA)n Simple_repeat Simple_repeat 2 65 0 4 656 257 109 0 21 chr3R 9383795 9383842 -18521211 + (TTG)n Simple_repeat Simple_repeat 1 46 0 4 656 211 234 0 0 chr3R 9384201 9384248 -18520805 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 4 656 24 32 0 0 chr3R 9386393 9386424 -18518629 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 226 250 0 0 chr3R 9387680 9387736 -18517317 + T-rich Low_complexity Low_complexity 1 56 0 4 656 246 284 0 33 chr3R 9387818 9387909 -18517144 + (CAA)n Simple_repeat Simple_repeat 2 89 0 4 656 204 40 0 0 chr3R 9389768 9389793 -18515260 + (CCCCG)n Simple_repeat Simple_repeat 3 27 0 4 656 189 147 0 0 chr3R 9389903 9389937 -18515116 + (GCTG)n Simple_repeat Simple_repeat 3 36 0 4 656 264 226 16 0 chr3R 9389942 9390004 -18515049 + (CTG)n Simple_repeat Simple_repeat 1 63 0 4 656 24 32 0 0 chr3R 9390286 9390317 -18514736 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 21 36 0 0 chr3R 9393029 9393057 -18511996 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 39 84 0 0 chr3R 9393747 9393842 -18511211 + AT_rich Low_complexity Low_complexity 1 95 0 4 656 219 157 0 0 chr3R 9394231 9394282 -18510771 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 4 656 207 0 0 0 chr3R 9395020 9395043 -18510010 + (A)n Simple_repeat Simple_repeat 1 23 0 4 656 237 108 0 0 chr3R 9396451 9396488 -18508565 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 4 656 201 74 0 0 chr3R 9397921 9397948 -18507105 + (TCCA)n Simple_repeat Simple_repeat 4 30 0 4 656 236 209 44 15 chr3R 9397985 9398053 -18507000 + (TCCA)n Simple_repeat Simple_repeat 2 71 0 4 656 23 0 0 0 chr3R 9399639 9399662 -18505391 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 180 217 0 0 chr3R 9400339 9400385 -18504668 + (TTCG)n Simple_repeat Simple_repeat 4 49 0 4 656 288 303 22 15 chr3R 9400591 9400725 -18504328 + (CAA)n Simple_repeat Simple_repeat 2 136 0 4 656 207 88 0 0 chr3R 9402663 9402697 -18502356 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 656 192 77 0 0 chr3R 9402977 9403003 -18502050 + (TCCTG)n Simple_repeat Simple_repeat 2 27 0 4 656 251 238 12 12 chr3R 9404892 9404973 -18500080 + (GTTTG)n Simple_repeat Simple_repeat 4 84 0 4 656 192 125 0 0 chr3R 9405179 9405211 -18499842 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 656 197 180 20 0 chr3R 9406760 9406810 -18498243 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 656 180 125 0 0 chr3R 9407232 9407264 -18497789 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 656 210 118 0 0 chr3R 9408722 9408756 -18496297 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 656 303 49 0 0 chr3R 9410471 9410512 -18494541 + (GTTTG)n Simple_repeat Simple_repeat 4 44 0 4 656 255 300 0 0 chr3R 9411601 9411671 -18493382 + (CCCGAA)n Simple_repeat Simple_repeat 5 74 0 4 656 27 49 0 0 chr3R 9411983 9412024 -18493029 + AT_rich Low_complexity Low_complexity 1 41 0 4 656 33 0 0 0 chr3R 9413683 9413716 -18491337 + AT_rich Low_complexity Low_complexity 1 33 0 4 656 249 119 0 0 chr3R 9416069 9416111 -18488942 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 656 24 53 0 0 chr3R 9416774 9416812 -18488241 + AT_rich Low_complexity Low_complexity 1 38 0 4 656 22 80 0 0 chr3R 9418379 9418429 -18486624 + AT_rich Low_complexity Low_complexity 1 50 0 4 656 23 0 0 0 chr3R 9418761 9418784 -18486269 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 186 133 0 0 chr3R 9419588 9419618 -18485435 + (T)n Simple_repeat Simple_repeat 1 30 0 4 656 59 38 0 0 chr3R 9420133 9420213 -18484840 + AT_rich Low_complexity Low_complexity 1 80 0 4 656 261 57 0 0 chr3R 9420591 9420626 -18484427 + (TC)n Simple_repeat Simple_repeat 1 35 0 4 656 253 237 20 88 chr3R 9422523 9422625 -18482428 - ROO_I LTR Pao -7487 769 675 4 656 24 32 0 0 chr3R 9423474 9423505 -18481548 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 24 0 0 0 chr3R 9426363 9426387 -18478666 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 22 0 0 0 chr3R 9429931 9429953 -18475100 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 24 0 0 0 chr3R 9430528 9430552 -18474501 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 219 36 0 0 chr3R 9430948 9430976 -18474077 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 656 25 31 0 0 chr3R 9431769 9431801 -18473252 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 249 182 0 0 chr3R 9431980 9432035 -18473018 + (CGGA)n Simple_repeat Simple_repeat 3 57 0 4 656 23 68 0 0 chr3R 9432578 9432622 -18472431 + AT_rich Low_complexity Low_complexity 1 44 0 4 656 203 184 0 0 chr3R 9433067 9433105 -18471948 + T-rich Low_complexity Low_complexity 1 38 0 4 656 21 36 0 0 chr3R 9434121 9434149 -18470904 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 23 0 0 0 chr3R 9436616 9436639 -18468414 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 23 33 0 0 chr3R 9439168 9439198 -18465855 + AT_rich Low_complexity Low_complexity 1 30 0 4 657 201 278 0 40 chr3R 9440573 9440648 -18464405 + (CAAG)n Simple_repeat Simple_repeat 2 73 0 4 657 23 0 0 0 chr3R 9441228 9441251 -18463802 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 285 29 0 0 chr3R 9441528 9441562 -18463491 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 4 657 183 42 0 0 chr3R 9443025 9443049 -18462004 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 657 26 0 0 0 chr3R 9443677 9443703 -18461350 + AT_rich Low_complexity Low_complexity 1 26 0 4 657 231 152 0 0 chr3R 9444490 9444536 -18460517 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 657 200 111 28 0 chr3R 9445343 9445379 -18459674 + (CTG)n Simple_repeat Simple_repeat 3 39 0 4 657 21 36 0 0 chr3R 9445843 9445871 -18459182 + AT_rich Low_complexity Low_complexity 1 28 0 4 657 182 62 31 0 chr3R 9448458 9448490 -18456563 + (CATTC)n Simple_repeat Simple_repeat 1 33 0 4 657 219 69 0 0 chr3R 9450506 9450535 -18454518 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 657 320 282 0 0 chr3R 9451037 9451168 -18453885 + CT-rich Low_complexity Low_complexity 2 132 0 4 657 186 43 0 0 chr3R 9452135 9452158 -18452895 + (CAGC)n Simple_repeat Simple_repeat 3 25 0 4 657 22 0 0 0 chr3R 9452227 9452249 -18452804 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 201 147 0 0 chr3R 9452895 9452929 -18452124 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 657 216 97 0 0 chr3R 9453145 9453176 -18451877 + (TTCCC)n Simple_repeat Simple_repeat 3 33 0 4 657 225 0 0 0 chr3R 9454359 9454384 -18450669 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 657 189 0 0 0 chr3R 9455180 9455201 -18449852 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 657 183 42 0 0 chr3R 9455337 9455361 -18449692 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 657 24 67 0 0 chr3R 9455580 9455625 -18449428 + AT_rich Low_complexity Low_complexity 1 45 0 4 657 222 152 43 0 chr3R 9460967 9461013 -18444040 + (TATG)n Simple_repeat Simple_repeat 3 50 0 4 657 201 184 0 20 chr3R 9461361 9461411 -18443642 + T-rich Low_complexity Low_complexity 2 50 0 4 657 227 93 23 0 chr3R 9461611 9461654 -18443399 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 4 657 222 140 0 57 chr3R 9461740 9461793 -18443260 + T-rich Low_complexity Low_complexity 5 54 0 4 657 316 314 0 0 chr3R 9462699 9462801 -18442252 + (CCG)n Simple_repeat Simple_repeat 2 103 0 4 657 229 216 0 0 chr3R 9463421 9463472 -18441581 + T-rich Low_complexity Low_complexity 1 51 0 4 657 23 0 0 0 chr3R 9463683 9463706 -18441347 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 28 48 0 0 chr3R 9465375 9465417 -18439636 + AT_rich Low_complexity Low_complexity 1 42 0 4 657 234 91 0 0 chr3R 9465852 9465885 -18439168 + (T)n Simple_repeat Simple_repeat 1 33 0 4 657 22 70 0 0 chr3R 9466376 9466419 -18438634 + AT_rich Low_complexity Low_complexity 1 43 0 4 657 215 197 16 16 chr3R 9466500 9466562 -18438491 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 657 225 83 0 0 chr3R 9467015 9467051 -18438002 + (TTG)n Simple_repeat Simple_repeat 2 37 0 4 657 219 103 0 0 chr3R 9467552 9467591 -18437462 + (TTG)n Simple_repeat Simple_repeat 2 40 0 4 657 243 103 0 0 chr3R 9467651 9467690 -18437363 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 657 36 0 0 0 chr3R 9469517 9469553 -18435500 + AT_rich Low_complexity Low_complexity 1 36 0 4 657 44 46 0 0 chr3R 9472154 9472219 -18432834 + AT_rich Low_complexity Low_complexity 1 65 0 4 657 27 62 0 0 chr3R 9472326 9472374 -18432679 + AT_rich Low_complexity Low_complexity 1 48 0 4 657 223 196 18 0 chr3R 9472973 9473029 -18432024 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 657 249 194 0 88 chr3R 9475697 9475799 -18429254 + ROO_I LTR Pao 636 728 -7528 4 657 296 105 0 34 chr3R 9476001 9476060 -18428993 + (CAG)n Simple_repeat Simple_repeat 3 59 0 4 657 236 230 9 65 chr3R 9477297 9477404 -18427649 + ROO_I LTR Pao 640 740 -7516 4 657 183 162 0 0 chr3R 9478135 9478172 -18426881 + A-rich Low_complexity Low_complexity 1 37 0 4 657 25 31 0 0 chr3R 9478213 9478245 -18426808 + AT_rich Low_complexity Low_complexity 1 32 0 4 657 229 182 0 0 chr3R 9478534 9478578 -18426475 + (TTCGG)n Simple_repeat Simple_repeat 1 44 0 4 657 228 86 0 0 chr3R 9479058 9479093 -18425960 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 657 22 0 0 0 chr3R 9479684 9479706 -18425347 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 33 0 0 0 chr3R 9480463 9480496 -18424557 + AT_rich Low_complexity Low_complexity 1 33 0 4 657 21 36 0 0 chr3R 9483520 9483548 -18421505 + AT_rich Low_complexity Low_complexity 1 28 0 4 657 216 296 0 0 chr3R 9484473 9484581 -18420472 + (CCG)n Simple_repeat Simple_repeat 2 109 0 4 657 268 373 0 0 chr3R 9484627 9484788 -18420265 + (CCG)n Simple_repeat Simple_repeat 2 162 0 4 657 21 57 0 0 chr3R 9485408 9485443 -18419610 + AT_rich Low_complexity Low_complexity 1 35 0 4 657 21 0 0 0 chr3R 9485466 9485487 -18419566 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 31 88 0 0 chr3R 9485517 9485597 -18419456 + AT_rich Low_complexity Low_complexity 1 80 0 4 657 22 0 0 0 chr3R 9485749 9485771 -18419282 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 270 0 0 0 chr3R 9496556 9496586 -18408467 + (A)n Simple_repeat Simple_repeat 1 30 0 4 657 225 0 0 0 chr3R 9497523 9497548 -18407505 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4 657 207 69 0 0 chr3R 9498450 9498479 -18406574 + (TGG)n Simple_repeat Simple_repeat 1 29 0 4 657 246 62 0 0 chr3R 9499052 9499084 -18405969 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 657 339 105 0 0 chr3R 9499381 9499438 -18405615 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 657 248 53 26 0 chr3R 9499580 9499618 -18405435 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 657 24 0 0 0 chr3R 9500814 9500838 -18404215 + AT_rich Low_complexity Low_complexity 1 24 0 4 657 195 167 0 0 chr3R 9504901 9504943 -18400110 + (CAG)n Simple_repeat Simple_repeat 2 43 0 4 657 232 240 0 0 chr3R 9509906 9509956 -18395097 + CT-rich Low_complexity Low_complexity 2 51 0 4 657 24 0 0 0 chr3R 9511771 9511795 -18393258 + AT_rich Low_complexity Low_complexity 1 24 0 4 657 22 0 0 0 chr3R 9513006 9513028 -18392025 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 216 111 0 0 chr3R 9516483 9516519 -18388534 + (CAG)n Simple_repeat Simple_repeat 1 36 0 4 657 265 277 0 0 chr3R 9516645 9516728 -18388325 + (TCG)n Simple_repeat Simple_repeat 2 84 0 4 657 21 57 0 0 chr3R 9517664 9517699 -18387354 + AT_rich Low_complexity Low_complexity 1 35 0 4 657 204 163 0 0 chr3R 9517763 9517806 -18387247 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 657 21 0 0 0 chr3R 9518347 9518368 -18386685 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 186 43 0 0 chr3R 9518973 9518996 -18386057 + (CAATC)n Simple_repeat Simple_repeat 5 27 0 4 657 193 146 20 20 chr3R 9519303 9519352 -18385701 + A-rich Low_complexity Low_complexity 5 53 0 4 657 22 80 0 0 chr3R 9519554 9519604 -18385449 + AT_rich Low_complexity Low_complexity 1 50 0 4 657 32 26 0 0 chr3R 9530608 9530647 -18374406 + AT_rich Low_complexity Low_complexity 1 39 0 4 657 36 40 0 0 chr3R 9531713 9531763 -18373290 + AT_rich Low_complexity Low_complexity 1 50 0 4 657 192 111 0 0 chr3R 9532234 9532270 -18372783 + (A)n Simple_repeat Simple_repeat 1 36 0 4 657 26 50 0 0 chr3R 9536754 9536794 -18368259 + AT_rich Low_complexity Low_complexity 1 40 0 4 657 1760 66 76 10 chr3R 9537852 9538142 -18366911 + S_DM DNA Tc1 1 309 -1427 4 657 186 118 0 0 chr3R 9538142 9538176 -18366877 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 657 195 42 0 0 chr3R 9538819 9538843 -18366210 + (CAA)n Simple_repeat Simple_repeat 1 24 0 4 657 32 0 0 0 chr3R 9539504 9539536 -18365517 + AT_rich Low_complexity Low_complexity 1 32 0 4 657 192 97 0 0 chr3R 9541020 9541051 -18364002 + (CAA)n Simple_repeat Simple_repeat 3 33 0 4 657 200 241 0 18 chr3R 9541968 9542023 -18363030 + T-rich Low_complexity Low_complexity 3 56 0 4 657 226 152 0 33 chr3R 9542606 9542667 -18362386 + (CAA)n Simple_repeat Simple_repeat 1 59 0 4 657 27 49 0 0 chr3R 9546380 9546421 -18358632 + AT_rich Low_complexity Low_complexity 1 41 0 4 657 188 203 31 0 chr3R 9546799 9546863 -18358190 + A-rich Low_complexity Low_complexity 4 69 0 4 657 25 0 0 0 chr3R 9547152 9547177 -18357876 + AT_rich Low_complexity Low_complexity 1 25 0 4 657 201 215 15 15 chr3R 9548141 9548207 -18356846 + T-rich Low_complexity Low_complexity 4 69 0 4 657 267 93 0 0 chr3R 9551775 9551818 -18353235 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 4 657 25 0 0 0 chr3R 9553475 9553500 -18351553 + AT_rich Low_complexity Low_complexity 1 25 0 4 657 210 224 0 0 chr3R 9554654 9554703 -18350350 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 4 657 205 191 0 0 chr3R 9555915 9555957 -18349096 + A-rich Low_complexity Low_complexity 2 43 0 4 657 186 43 0 0 chr3R 9556896 9556919 -18348134 + (CTG)n Simple_repeat Simple_repeat 3 25 0 4 657 228 35 0 0 chr3R 9557856 9557885 -18347168 + (GCTG)n Simple_repeat Simple_repeat 4 32 0 4 657 439 190 473 0 chr3R 9559615 9559758 -18345295 + DNAREP1_DM LINE Penelope 383 593 -1 4 657 234 135 0 0 chr3R 9560318 9560355 -18344698 - TIRANT_I LTR Gypsy -5288 2404 2368 4 657 26 0 0 0 chr3R 9560948 9560974 -18344079 + AT_rich Low_complexity Low_complexity 1 26 0 4 657 25 51 0 0 chr3R 9561906 9561945 -18343108 + AT_rich Low_complexity Low_complexity 1 39 0 4 657 180 0 0 0 chr3R 9562300 9562320 -18342733 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 657 231 36 0 0 chr3R 9565271 9565299 -18339754 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 657 186 167 0 0 chr3R 9565967 9566003 -18339050 + (ATG)n Simple_repeat Simple_repeat 1 36 0 4 657 189 74 0 0 chr3R 9568159 9568186 -18336867 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 658 249 33 0 0 chr3R 9569040 9569070 -18335983 + (CAGC)n Simple_repeat Simple_repeat 4 33 0 4 658 321 135 0 0 chr3R 9571978 9572030 -18333023 + (CAG)n Simple_repeat Simple_repeat 1 52 0 4 658 252 122 0 0 chr3R 9572094 9572135 -18332918 + (CAG)n Simple_repeat Simple_repeat 3 43 0 4 658 362 191 43 0 chr3R 9572172 9572266 -18332787 + ROO_I LTR Pao 640 737 -7519 4 658 274 236 0 0 chr3R 9573102 9573174 -18331879 + ROO_I LTR Pao 670 741 -7515 4 658 233 163 0 20 chr3R 9576711 9576761 -18328292 + T-rich Low_complexity Low_complexity 4 52 0 4 658 216 319 0 0 chr3R 9578022 9578094 -18326959 + (CAA)n Simple_repeat Simple_repeat 1 72 0 4 658 200 184 0 0 chr3R 9578312 9578350 -18326703 + GA-rich Low_complexity Low_complexity 2 39 0 4 658 228 127 55 0 chr3R 9581567 9581622 -18323431 + (TTG)n Simple_repeat Simple_repeat 2 59 0 4 658 24 32 0 0 chr3R 9583242 9583273 -18321780 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 25 0 0 0 chr3R 9583808 9583833 -18321220 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 27 49 0 0 chr3R 9585766 9585807 -18319246 + AT_rich Low_complexity Low_complexity 1 41 0 4 658 209 217 0 0 chr3R 9587360 9587406 -18317647 + A-rich Low_complexity Low_complexity 1 46 0 4 658 285 145 0 0 chr3R 9587414 9587476 -18317577 + (CAA)n Simple_repeat Simple_repeat 1 62 0 4 658 21 36 0 0 chr3R 9587951 9587979 -18317074 + AT_rich Low_complexity Low_complexity 1 28 0 4 658 213 94 0 0 chr3R 9590102 9590134 -18314919 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 658 255 157 0 0 chr3R 9590251 9590302 -18314751 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 658 31 0 0 0 chr3R 9590971 9591002 -18314051 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 210 105 0 0 chr3R 9592646 9592684 -18312369 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4 658 33 56 0 0 chr3R 9595546 9595600 -18309453 + AT_rich Low_complexity Low_complexity 1 54 0 4 658 25 51 0 0 chr3R 9598600 9598639 -18306414 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 21 0 0 0 chr3R 9599986 9600007 -18305046 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 215 373 7 7 chr3R 9600217 9600352 -18304701 + (CGA)n Simple_repeat Simple_repeat 1 135 0 4 658 24 0 0 0 chr3R 9600919 9600943 -18304110 + AT_rich Low_complexity Low_complexity 1 24 0 4 658 213 94 0 0 chr3R 9601397 9601429 -18303624 + (ATG)n Simple_repeat Simple_repeat 3 34 0 4 658 31 0 0 0 chr3R 9601924 9601955 -18303098 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 23 54 0 0 chr3R 9602298 9602335 -18302718 + AT_rich Low_complexity Low_complexity 1 37 0 4 658 231 36 0 0 chr3R 9612894 9612922 -18292131 + (CTG)n Simple_repeat Simple_repeat 2 29 0 4 658 205 171 0 0 chr3R 9612942 9612977 -18292076 + (CAG)n Simple_repeat Simple_repeat 3 37 0 4 658 240 149 0 0 chr3R 9613051 9613098 -18291955 + (CAG)n Simple_repeat Simple_repeat 1 47 0 4 658 276 137 0 0 chr3R 9613463 9613514 -18291539 + (CAG)n Simple_repeat Simple_repeat 2 52 0 4 658 47 53 0 0 chr3R 9614001 9614076 -18290977 + AT_rich Low_complexity Low_complexity 1 75 0 4 658 221 154 0 0 chr3R 9616008 9616047 -18289006 + (CTG)n Simple_repeat Simple_repeat 1 39 0 4 658 266 106 0 21 chr3R 9616205 9616253 -18288800 + (GCTTG)n Simple_repeat Simple_repeat 2 48 0 4 658 34 24 0 0 chr3R 9617723 9617764 -18287289 + AT_rich Low_complexity Low_complexity 1 41 0 4 658 254 349 8 15 chr3R 9618163 9618297 -18286756 + (CAGAGA)n Simple_repeat Simple_repeat 3 135 0 4 658 36 77 0 0 chr3R 9618565 9618643 -18286410 + AT_rich Low_complexity Low_complexity 1 78 0 4 658 228 122 0 0 chr3R 9618988 9619029 -18286024 + (CAGT)n Simple_repeat Simple_repeat 3 43 0 4 658 210 71 0 0 chr3R 9619409 9619437 -18285616 + (ATG)n Simple_repeat Simple_repeat 3 30 0 4 658 180 0 0 0 chr3R 9619646 9619666 -18285387 + (CATCC)n Simple_repeat Simple_repeat 5 24 0 4 658 288 0 0 0 chr3R 9620534 9620566 -18284487 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 658 230 95 24 0 chr3R 9620714 9620756 -18284297 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 658 213 185 18 18 chr3R 9622559 9622614 -18282439 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 658 234 129 32 16 chr3R 9622726 9622789 -18282264 + (CAA)n Simple_repeat Simple_repeat 3 66 0 4 658 201 94 0 0 chr3R 9622924 9622956 -18282097 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 658 213 203 0 63 chr3R 9623541 9623604 -18281449 + (CAG)n Simple_repeat Simple_repeat 1 59 0 4 658 25 31 0 0 chr3R 9623836 9623868 -18281185 + AT_rich Low_complexity Low_complexity 1 32 0 4 658 33 43 0 0 chr3R 9625507 9625554 -18279499 + AT_rich Low_complexity Low_complexity 1 47 0 4 658 26 0 0 0 chr3R 9626339 9626365 -18278688 + AT_rich Low_complexity Low_complexity 1 26 0 4 658 186 71 0 0 chr3R 9626750 9626778 -18278275 + (A)n Simple_repeat Simple_repeat 1 28 0 4 658 32 0 0 0 chr3R 9629746 9629778 -18275275 + AT_rich Low_complexity Low_complexity 1 32 0 4 658 25 0 0 0 chr3R 9629893 9629918 -18275135 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 221 0 0 33 chr3R 9629918 9629948 -18275105 + (TTA)n Simple_repeat Simple_repeat 3 31 0 4 658 206 143 0 20 chr3R 9638560 9638610 -18266443 + GA-rich Low_complexity Low_complexity 2 50 0 4 658 31 44 0 0 chr3R 9639913 9639958 -18265095 + AT_rich Low_complexity Low_complexity 1 45 0 4 658 222 37 0 0 chr3R 9640491 9640518 -18264535 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 658 21 0 0 0 chr3R 9641531 9641552 -18263501 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 204 184 0 0 chr3R 9642034 9642083 -18262970 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 658 212 175 0 0 chr3R 9645822 9645862 -18259191 + T-rich Low_complexity Low_complexity 1 40 0 4 658 186 143 0 0 chr3R 9646463 9646498 -18258555 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 658 222 136 0 0 chr3R 9646597 9646641 -18258412 + (T)n Simple_repeat Simple_repeat 1 44 0 4 658 35 54 0 0 chr3R 9647615 9647671 -18257382 + AT_rich Low_complexity Low_complexity 1 56 0 4 658 192 179 0 0 chr3R 9648292 9648331 -18256722 + (CAA)n Simple_repeat Simple_repeat 2 40 0 4 658 204 125 0 0 chr3R 9650250 9650282 -18254771 + (CAATC)n Simple_repeat Simple_repeat 3 34 0 4 658 201 234 0 0 chr3R 9650629 9650676 -18254377 + (GCTTG)n Simple_repeat Simple_repeat 3 49 0 4 658 30 45 0 0 chr3R 9650967 9651011 -18254042 + AT_rich Low_complexity Low_complexity 1 44 0 4 658 32 26 0 0 chr3R 9651574 9651613 -18253440 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 24 0 0 0 chr3R 9652441 9652465 -18252588 + AT_rich Low_complexity Low_complexity 1 24 0 4 658 231 36 0 0 chr3R 9652585 9652613 -18252440 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 4 658 288 91 0 0 chr3R 9655863 9655907 -18249146 + (AAATG)n Simple_repeat Simple_repeat 1 44 0 4 658 23 33 0 0 chr3R 9657609 9657639 -18247414 + AT_rich Low_complexity Low_complexity 1 30 0 4 658 21 36 0 0 chr3R 9657809 9657837 -18247216 + AT_rich Low_complexity Low_complexity 1 28 0 4 658 23 0 0 0 chr3R 9659894 9659917 -18245136 + AT_rich Low_complexity Low_complexity 1 23 0 4 658 22 0 0 0 chr3R 9660208 9660230 -18244823 + AT_rich Low_complexity Low_complexity 1 22 0 4 658 22 35 0 0 chr3R 9660281 9660310 -18244743 + AT_rich Low_complexity Low_complexity 1 29 0 4 658 21 36 0 0 chr3R 9663975 9664003 -18241050 + AT_rich Low_complexity Low_complexity 1 28 0 4 658 329 47 62 0 chr3R 9664046 9664110 -18240943 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 658 29 0 0 0 chr3R 9664238 9664267 -18240786 + AT_rich Low_complexity Low_complexity 1 29 0 4 658 27 0 0 0 chr3R 9665749 9665776 -18239277 + AT_rich Low_complexity Low_complexity 1 27 0 4 658 210 71 0 0 chr3R 9667839 9667867 -18237186 + (CAT)n Simple_repeat Simple_repeat 1 28 0 4 658 25 0 0 0 chr3R 9668586 9668611 -18236442 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 205 152 0 0 chr3R 9669056 9669089 -18235964 + (CATCC)n Simple_repeat Simple_repeat 2 34 0 4 658 33 90 0 0 chr3R 9669546 9669635 -18235418 + AT_rich Low_complexity Low_complexity 1 89 0 4 658 225 119 0 0 chr3R 9670077 9670119 -18234934 + (AGTTG)n Simple_repeat Simple_repeat 2 43 0 4 658 25 51 0 0 chr3R 9670999 9671038 -18234015 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 22 56 0 0 chr3R 9671775 9671811 -18233242 + AT_rich Low_complexity Low_complexity 1 36 0 4 658 260 296 11 0 chr3R 9672112 9672200 -18232853 + (TTG)n Simple_repeat Simple_repeat 1 89 0 4 658 23 0 0 0 chr3R 9673228 9673251 -18231802 + AT_rich Low_complexity Low_complexity 1 23 0 4 658 228 210 0 0 chr3R 9673323 9673404 -18231649 + (ACTG)n Simple_repeat Simple_repeat 3 83 0 4 658 24 53 0 0 chr3R 9674066 9674104 -18230949 + AT_rich Low_complexity Low_complexity 1 38 0 4 658 48 60 0 0 chr3R 9674115 9674198 -18230855 + AT_rich Low_complexity Low_complexity 1 83 0 4 658 198 0 0 0 chr3R 9674938 9674960 -18230093 + (A)n Simple_repeat Simple_repeat 1 22 0 4 658 28 29 0 0 chr3R 9678649 9678684 -18226369 + AT_rich Low_complexity Low_complexity 1 35 0 4 658 203 133 0 0 chr3R 9683819 9683849 -18221204 + (CAT)n Simple_repeat Simple_repeat 3 32 0 4 658 31 0 0 0 chr3R 9688242 9688273 -18216780 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 245 180 20 0 chr3R 9691360 9691410 -18213643 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 658 21 71 0 0 chr3R 9692479 9692521 -18212532 + AT_rich Low_complexity Low_complexity 1 42 0 4 658 318 87 0 0 chr3R 9693247 9693293 -18211760 + (TCTCCC)n Simple_repeat Simple_repeat 1 46 0 4 658 382 120 0 32 chr3R 9693302 9693397 -18211656 + (CTG)n Simple_repeat Simple_repeat 3 94 0 4 658 202 338 0 0 chr3R 9693634 9693702 -18211351 + (CCG)n Simple_repeat Simple_repeat 2 69 0 4 658 25 51 0 0 chr3R 9698863 9698902 -18206151 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 198 103 0 0 chr3R 9699242 9699271 -18205782 + (CTG)n Simple_repeat Simple_repeat 1 29 0 4 659 207 114 0 0 chr3R 9701049 9701084 -18203969 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 659 30 27 0 0 chr3R 9701259 9701296 -18203757 + AT_rich Low_complexity Low_complexity 1 37 0 4 659 35 0 0 0 chr3R 9704943 9704978 -18200075 + AT_rich Low_complexity Low_complexity 1 35 0 4 659 46 19 0 0 chr3R 9705907 9705960 -18199093 + AT_rich Low_complexity Low_complexity 1 53 0 4 659 217 267 0 0 chr3R 9712814 9712874 -18192179 + G-rich Low_complexity Low_complexity 2 61 0 4 659 32 26 0 0 chr3R 9714823 9714862 -18190191 + AT_rich Low_complexity Low_complexity 1 39 0 4 659 26 0 0 0 chr3R 9715273 9715299 -18189754 + AT_rich Low_complexity Low_complexity 1 26 0 4 659 204 40 0 0 chr3R 9718535 9718560 -18186493 + (TCTCG)n Simple_repeat Simple_repeat 5 29 0 4 659 29 28 0 0 chr3R 9721154 9721190 -18183863 + AT_rich Low_complexity Low_complexity 1 36 0 4 659 21 0 0 0 chr3R 9722411 9722432 -18182621 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 42 20 0 0 chr3R 9725993 9726042 -18179011 + AT_rich Low_complexity Low_complexity 1 49 0 4 659 36 40 0 0 chr3R 9726847 9726897 -18178156 + AT_rich Low_complexity Low_complexity 1 50 0 4 659 21 0 0 0 chr3R 9730414 9730435 -18174618 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 28 79 0 0 chr3R 9733556 9733619 -18171434 + AT_rich Low_complexity Low_complexity 1 63 0 4 659 231 36 0 0 chr3R 9737221 9737249 -18167804 + (CGAGT)n Simple_repeat Simple_repeat 2 29 0 4 659 21 0 0 0 chr3R 9741516 9741537 -18163516 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 21 71 0 0 chr3R 9743923 9743965 -18161088 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 243 0 0 0 chr3R 9744803 9744830 -18160223 + (TAG)n Simple_repeat Simple_repeat 3 29 0 4 659 21 0 0 0 chr3R 9746066 9746087 -18158966 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 180 0 0 0 chr3R 9747867 9747887 -18157166 + (TTG)n Simple_repeat Simple_repeat 1 20 0 4 659 21 71 0 0 chr3R 9748582 9748624 -18156429 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 189 0 0 0 chr3R 9749220 9749241 -18155812 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 659 24 53 0 0 chr3R 9749799 9749837 -18155216 + AT_rich Low_complexity Low_complexity 1 38 0 4 659 24 0 0 0 chr3R 9749870 9749894 -18155159 + AT_rich Low_complexity Low_complexity 1 24 0 4 659 23 68 0 0 chr3R 9750637 9750681 -18154372 + AT_rich Low_complexity Low_complexity 1 44 0 4 659 35 0 0 0 chr3R 9753056 9753091 -18151962 + AT_rich Low_complexity Low_complexity 1 35 0 4 659 24 0 0 0 chr3R 9754224 9754248 -18150805 + AT_rich Low_complexity Low_complexity 1 24 0 4 659 188 86 29 0 chr3R 9754518 9754553 -18150500 + (CACCAT)n Simple_repeat Simple_repeat 2 37 0 4 659 21 0 0 0 chr3R 9755265 9755286 -18149767 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 234 156 0 0 chr3R 9755959 9756004 -18149049 + (TTCGGG)n Simple_repeat Simple_repeat 4 48 0 4 659 22 0 0 0 chr3R 9759503 9759525 -18145528 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 21 0 0 0 chr3R 9761368 9761389 -18143664 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 204 40 0 0 chr3R 9764298 9764323 -18140730 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 659 249 139 0 0 chr3R 9764386 9764429 -18140624 + (CAACT)n Simple_repeat Simple_repeat 4 46 0 4 659 22 35 0 0 chr3R 9765086 9765115 -18139938 + AT_rich Low_complexity Low_complexity 1 29 0 4 659 28 61 0 0 chr3R 9765235 9765284 -18139769 + AT_rich Low_complexity Low_complexity 1 49 0 4 659 21 0 0 0 chr3R 9767274 9767295 -18137758 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 230 106 21 0 chr3R 9769227 9769274 -18135779 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 4 659 26 30 0 0 chr3R 9769289 9769322 -18135731 + AT_rich Low_complexity Low_complexity 1 33 0 4 659 192 40 0 0 chr3R 9773767 9773792 -18131261 + (CAGAC)n Simple_repeat Simple_repeat 3 27 0 4 659 21 36 0 0 chr3R 9775023 9775051 -18130002 + AT_rich Low_complexity Low_complexity 1 28 0 4 659 28 48 0 0 chr3R 9776978 9777020 -18128033 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 24 67 0 0 chr3R 9777201 9777246 -18127807 + AT_rich Low_complexity Low_complexity 1 45 0 4 659 21 0 0 0 chr3R 9777639 9777660 -18127393 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 25 51 0 0 chr3R 9779165 9779204 -18125849 + AT_rich Low_complexity Low_complexity 1 39 0 4 659 30 45 0 0 chr3R 9783091 9783135 -18121918 + AT_rich Low_complexity Low_complexity 1 44 0 4 659 22 0 0 0 chr3R 9783591 9783613 -18121440 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 26 30 0 0 chr3R 9790490 9790523 -18114530 + AT_rich Low_complexity Low_complexity 1 33 0 4 659 315 85 0 0 chr3R 9794145 9794192 -18110861 + (TAA)n Simple_repeat Simple_repeat 1 47 0 4 659 362 288 6 34 chr3R 9794213 9794389 -18110664 + T-rich Low_complexity Low_complexity 4 174 0 4 659 523 144 0 46 chr3R 9794754 9794907 -18110146 + (TTG)n Simple_repeat Simple_repeat 2 147 0 4 659 26 0 0 0 chr3R 9796375 9796401 -18108652 + AT_rich Low_complexity Low_complexity 1 26 0 4 659 215 180 0 39 chr3R 9797729 9797781 -18107272 + GA-rich Low_complexity Low_complexity 3 52 0 4 659 180 0 0 0 chr3R 9797827 9797847 -18107206 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 659 210 118 0 0 chr3R 9798511 9798545 -18106508 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 659 206 227 26 13 chr3R 9800549 9800625 -18104428 + T-rich Low_complexity Low_complexity 6 82 0 4 659 189 0 0 0 chr3R 9801993 9802014 -18103039 + (TC)n Simple_repeat Simple_repeat 2 22 0 4 659 228 182 0 35 chr3R 9802392 9802449 -18102604 + CT-rich Low_complexity Low_complexity 2 56 0 4 659 200 227 0 0 chr3R 9803909 9803953 -18101100 + A-rich Low_complexity Low_complexity 1 44 0 4 659 202 186 47 0 chr3R 9804470 9804513 -18100540 + (CATA)n Simple_repeat Simple_repeat 3 47 0 4 659 19529 2 0 0 chr3R 9804514 9806619 -18098434 + DMRT1B LINE R1 3079 5183 0 4 659 189 0 0 0 chr3R 9807292 9807313 -18097740 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 659 525 102 18 9 chr3R 9807458 9807567 -18097486 + (CTG)n Simple_repeat Simple_repeat 1 110 0 4 659 222 62 0 0 chr3R 9807831 9807863 -18097190 + (GGA)n Simple_repeat Simple_repeat 1 32 0 4 659 251 246 0 0 chr3R 9807887 9807944 -18097109 - ROO_I LTR Pao -7515 741 685 4 659 297 135 0 0 chr3R 9808131 9808183 -18096870 + (CTG)n Simple_repeat Simple_repeat 2 53 0 4 659 232 202 0 35 chr3R 9808237 9808324 -18096729 + (CTG)n Simple_repeat Simple_repeat 3 86 0 4 659 197 253 0 11 chr3R 9808385 9808473 -18096580 + (CTG)n Simple_repeat Simple_repeat 3 89 0 4 659 209 179 0 0 chr3R 9808538 9808577 -18096476 + (CTG)n Simple_repeat Simple_repeat 2 40 0 4 659 228 111 0 0 chr3R 9809543 9809579 -18095474 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 659 234 0 0 0 chr3R 9811154 9811180 -18093873 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 659 216 0 0 0 chr3R 9811958 9811982 -18093071 + (CAGC)n Simple_repeat Simple_repeat 3 26 0 4 659 27 29 0 0 chr3R 9815848 9815882 -18089171 + AT_rich Low_complexity Low_complexity 1 34 0 4 659 22 35 0 0 chr3R 9817342 9817371 -18087682 + AT_rich Low_complexity Low_complexity 1 29 0 4 659 29 0 0 0 chr3R 9817756 9817785 -18087268 + AT_rich Low_complexity Low_complexity 1 29 0 4 659 212 164 16 32 chr3R 9818410 9818473 -18086580 + (TATAA)n Simple_repeat Simple_repeat 4 65 0 4 659 21 0 0 0 chr3R 9818591 9818612 -18086441 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 208 250 0 0 chr3R 9818896 9818944 -18086109 + T-rich Low_complexity Low_complexity 1 48 0 4 659 22 0 0 0 chr3R 9819543 9819565 -18085488 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 204 40 0 0 chr3R 9820741 9820766 -18084287 + (A)n Simple_repeat Simple_repeat 1 25 0 4 659 320 278 9 18 chr3R 9821785 9821895 -18083158 + (CAA)n Simple_repeat Simple_repeat 3 111 0 4 659 186 143 0 0 chr3R 9822640 9822675 -18082378 + (CGAAT)n Simple_repeat Simple_repeat 4 38 0 4 659 213 128 26 0 chr3R 9823226 9823265 -18081788 + (CGAAA)n Simple_repeat Simple_repeat 3 42 0 4 659 21 0 0 0 chr3R 9823960 9823981 -18081072 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 226 344 0 11 chr3R 9824413 9824507 -18080546 + (ACTG)n Simple_repeat Simple_repeat 3 95 0 4 659 30 45 0 0 chr3R 9826140 9826184 -18078869 + AT_rich Low_complexity Low_complexity 1 44 0 4 659 279 0 0 0 chr3R 9828354 9828385 -18076668 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 659 189 121 0 0 chr3R 9829605 9829638 -18075415 + (GGTTG)n Simple_repeat Simple_repeat 4 36 0 4 659 249 239 15 15 chr3R 9829710 9829778 -18075275 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 4 659 222 118 0 0 chr3R 9829998 9830032 -18075021 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 660 201 207 17 17 chr3R 9831907 9831966 -18073087 + T-rich Low_complexity Low_complexity 5 63 0 4 660 24 67 0 0 chr3R 9833437 9833482 -18071571 + AT_rich Low_complexity Low_complexity 1 45 0 4 660 222 220 0 20 chr3R 9835315 9835366 -18069687 + (CTG)n Simple_repeat Simple_repeat 3 52 0 4 660 224 93 47 0 chr3R 9835749 9835792 -18069261 + (CATTT)n Simple_repeat Simple_repeat 2 46 0 4 660 201 196 0 0 chr3R 9836010 9836056 -18068997 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 660 180 0 0 0 chr3R 9838831 9838851 -18066202 + (GCTTG)n Simple_repeat Simple_repeat 4 23 0 4 660 209 83 0 27 chr3R 9839785 9839822 -18065231 + (CAGTT)n Simple_repeat Simple_repeat 5 40 0 4 660 24 53 0 0 chr3R 9841967 9842005 -18063048 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 32 0 0 0 chr3R 9842502 9842534 -18062519 + AT_rich Low_complexity Low_complexity 1 32 0 4 660 24 32 0 0 chr3R 9843052 9843083 -18061970 + AT_rich Low_complexity Low_complexity 1 31 0 4 660 408 55 0 0 chr3R 9843519 9843574 -18061479 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 660 41 0 0 0 chr3R 9843988 9844029 -18061024 + AT_rich Low_complexity Low_complexity 1 41 0 4 660 21 0 0 0 chr3R 9844611 9844632 -18060421 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 255 170 0 0 chr3R 9845321 9845368 -18059685 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 660 29 28 0 0 chr3R 9845920 9845956 -18059097 + AT_rich Low_complexity Low_complexity 1 36 0 4 660 11330 93 3 18 chr3R 9847423 9849185 -18055868 - S_DM DNA Tc1 0 1736 1 4 660 207 219 0 59 chr3R 9849980 9850048 -18055005 + A-rich Low_complexity Low_complexity 4 67 0 4 660 249 83 0 0 chr3R 9852439 9852475 -18052578 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 660 201 74 0 0 chr3R 9857516 9857543 -18047510 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 660 39 60 0 0 chr3R 9857916 9857983 -18047070 + AT_rich Low_complexity Low_complexity 1 67 0 4 660 24 32 0 0 chr3R 9862952 9862983 -18042070 + AT_rich Low_complexity Low_complexity 1 31 0 4 660 303 113 0 0 chr3R 9863332 9863385 -18041668 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 660 21 71 0 0 chr3R 9864151 9864193 -18040860 + AT_rich Low_complexity Low_complexity 1 42 0 4 660 183 49 48 24 chr3R 9866134 9866176 -18038877 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 660 193 146 20 20 chr3R 9866173 9866222 -18038831 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 660 186 43 0 0 chr3R 9868755 9868778 -18036275 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 660 27 29 0 0 chr3R 9869134 9869168 -18035885 + AT_rich Low_complexity Low_complexity 1 34 0 4 660 321 135 0 0 chr3R 9872430 9872482 -18032571 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 660 30 105 0 0 chr3R 9872606 9872720 -18032333 + AT_rich Low_complexity Low_complexity 1 114 0 4 660 216 111 0 0 chr3R 9874022 9874058 -18030995 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 660 216 0 0 0 chr3R 9874898 9874922 -18030131 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 660 23 0 0 0 chr3R 9876845 9876868 -18028185 + AT_rich Low_complexity Low_complexity 1 23 0 4 660 212 284 0 0 chr3R 9877414 9877481 -18027572 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 660 21 0 0 0 chr3R 9881589 9881610 -18023443 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 27 49 0 0 chr3R 9882228 9882269 -18022784 + AT_rich Low_complexity Low_complexity 1 41 0 4 660 23 33 0 0 chr3R 9883550 9883580 -18021473 + AT_rich Low_complexity Low_complexity 1 30 0 4 660 294 183 0 0 chr3R 9885678 9885749 -18019304 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 660 22 0 0 0 chr3R 9885866 9885888 -18019165 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 249 108 0 0 chr3R 9887113 9887150 -18017903 + (TCG)n Simple_repeat Simple_repeat 2 38 0 4 660 216 212 0 0 chr3R 9887271 9887337 -18017716 + T-rich Low_complexity Low_complexity 1 66 0 4 660 201 271 0 14 chr3R 9889208 9889279 -18015774 + T-rich Low_complexity Low_complexity 3 72 0 4 660 23 68 0 0 chr3R 9890640 9890684 -18014369 + AT_rich Low_complexity Low_complexity 1 44 0 4 660 31 26 0 0 chr3R 9892211 9892249 -18012804 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 42 20 0 0 chr3R 9892598 9892647 -18012406 + AT_rich Low_complexity Low_complexity 1 49 0 4 660 206 118 0 0 chr3R 9893260 9893294 -18011759 + (T)n Simple_repeat Simple_repeat 1 34 0 4 660 26 0 0 0 chr3R 9894713 9894739 -18010314 + AT_rich Low_complexity Low_complexity 1 26 0 4 660 23 0 0 0 chr3R 9896789 9896812 -18008241 + AT_rich Low_complexity Low_complexity 1 23 0 4 660 22 0 0 0 chr3R 9898481 9898503 -18006550 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 24 53 0 0 chr3R 9901373 9901411 -18003642 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 180 77 0 0 chr3R 9901461 9901487 -18003566 + (T)n Simple_repeat Simple_repeat 1 26 0 4 660 207 0 0 0 chr3R 9901672 9901695 -18003358 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 660 198 156 0 0 chr3R 9906481 9906526 -17998527 + (CAG)n Simple_repeat Simple_repeat 1 45 0 4 660 273 57 0 0 chr3R 9906856 9906891 -17998162 + (CAG)n Simple_repeat Simple_repeat 3 37 0 4 660 362 157 0 0 chr3R 9907395 9907484 -17997569 + ROO_I LTR Pao 644 732 -7524 4 660 23 68 0 0 chr3R 9910005 9910049 -17995004 + AT_rich Low_complexity Low_complexity 1 44 0 4 660 43 64 0 0 chr3R 9910365 9910443 -17994610 + AT_rich Low_complexity Low_complexity 1 78 0 4 660 201 147 0 0 chr3R 9911987 9912021 -17993032 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 4 660 223 200 30 30 chr3R 9912722 9912789 -17992264 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 4 660 267 191 0 0 chr3R 9918647 9918710 -17986343 + (TTG)n Simple_repeat Simple_repeat 3 65 0 4 660 23 0 0 0 chr3R 9920762 9920785 -17984268 + AT_rich Low_complexity Low_complexity 1 23 0 4 660 22 35 0 0 chr3R 9922287 9922316 -17982737 + AT_rich Low_complexity Low_complexity 1 29 0 4 660 35 0 0 0 chr3R 9923738 9923773 -17981280 + AT_rich Low_complexity Low_complexity 1 35 0 4 660 35 63 0 0 chr3R 9923976 9924039 -17981014 + AT_rich Low_complexity Low_complexity 1 63 0 4 660 41 21 0 0 chr3R 9924799 9924847 -17980206 + AT_rich Low_complexity Low_complexity 1 48 0 4 660 234 0 0 0 chr3R 9926449 9926475 -17978578 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 660 46 0 0 0 chr3R 9926729 9926775 -17978278 + AT_rich Low_complexity Low_complexity 1 46 0 4 660 24 0 0 0 chr3R 9933180 9933204 -17971849 + AT_rich Low_complexity Low_complexity 1 24 0 4 660 26 0 0 0 chr3R 9934878 9934904 -17970149 + AT_rich Low_complexity Low_complexity 1 26 0 4 660 24 53 0 0 chr3R 9936816 9936854 -17968199 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 22 0 0 0 chr3R 9938142 9938164 -17966889 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 183 100 0 0 chr3R 9939510 9939540 -17965513 + (CTG)n Simple_repeat Simple_repeat 2 31 0 4 660 22 0 0 0 chr3R 9942136 9942158 -17962895 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 21 36 0 0 chr3R 9948262 9948290 -17956763 + AT_rich Low_complexity Low_complexity 1 28 0 4 660 21 0 0 0 chr3R 9950163 9950184 -17954869 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 34 0 0 0 chr3R 9951336 9951370 -17953683 + AT_rich Low_complexity Low_complexity 1 34 0 4 660 21 71 0 0 chr3R 9956960 9957002 -17948051 + AT_rich Low_complexity Low_complexity 1 42 0 4 660 26 30 0 0 chr3R 9957860 9957893 -17947160 + AT_rich Low_complexity Low_complexity 1 33 0 4 660 30 100 0 0 chr3R 9958175 9958275 -17946778 + AT_rich Low_complexity Low_complexity 1 100 0 4 660 22 0 0 0 chr3R 9959856 9959878 -17945175 + AT_rich Low_complexity Low_complexity 1 22 0 4 661 24 32 0 0 chr3R 9963321 9963352 -17941701 + AT_rich Low_complexity Low_complexity 1 31 0 4 661 21 0 0 0 chr3R 9963426 9963447 -17941606 + AT_rich Low_complexity Low_complexity 1 21 0 4 661 33 25 0 0 chr3R 9964677 9964717 -17940336 + AT_rich Low_complexity Low_complexity 1 40 0 4 661 182 193 18 0 chr3R 9966145 9966202 -17938851 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 661 28 86 0 0 chr3R 9971283 9971353 -17933700 + AT_rich Low_complexity Low_complexity 1 70 0 4 661 26 30 0 0 chr3R 9976627 9976660 -17928393 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 28 0 0 0 chr3R 9979678 9979706 -17925347 + AT_rich Low_complexity Low_complexity 1 28 0 4 661 28 29 0 0 chr3R 9980353 9980388 -17924665 + AT_rich Low_complexity Low_complexity 1 35 0 4 661 357 82 0 0 chr3R 9989838 9989887 -17915166 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 661 33 25 0 0 chr3R 9991654 9991694 -17913359 + AT_rich Low_complexity Low_complexity 1 40 0 4 661 43 56 0 0 chr3R 9992686 9992757 -17912296 + AT_rich Low_complexity Low_complexity 1 71 0 4 661 31 58 0 0 chr3R 9995413 9995465 -17909588 + AT_rich Low_complexity Low_complexity 1 52 0 4 661 216 235 0 29 chr3R 9997220 9997290 -17907763 + (GTTTG)n Simple_repeat Simple_repeat 2 69 0 4 661 38 51 0 0 chr3R 9997893 9997952 -17907101 + AT_rich Low_complexity Low_complexity 1 59 0 4 661 330 123 0 0 chr3R 9999942 9999999 -17905054 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 4 661 21 71 0 0 chr3R 10002282 10002324 -17902729 + AT_rich Low_complexity Low_complexity 1 42 0 4 661 200 276 0 13 chr3R 10002988 10003065 -17901988 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 4 661 222 211 0 0 chr3R 10003029 10003081 -17901972 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 661 43297 1 0 0 chr3R 10006588 10011276 -17893777 + FW_DM LINE Jockey 5 4692 0 4 661 180 0 0 0 chr3R 10011276 10011296 -17893757 + (A)n Simple_repeat Simple_repeat 1 20 0 4 661 216 0 0 0 chr3R 10012095 10012119 -17892934 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 661 200 194 0 0 chr3R 10017890 10017926 -17887127 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 661 3994 2 0 0 chr3R 10020204 10020632 -17884421 + ROO_LTR LTR Pao 1 428 0 4 661 74667 1 2 0 chr3R 10020632 10028868 -17876185 + ROO_I LTR Pao 1 8256 0 4 661 3994 2 0 0 chr3R 10028868 10029296 -17875757 + ROO_LTR LTR Pao 1 428 0 4 661 22 0 0 0 chr3R 10031267 10031289 -17873764 + AT_rich Low_complexity Low_complexity 1 22 0 4 661 25 31 0 0 chr3R 10032517 10032549 -17872504 + AT_rich Low_complexity Low_complexity 1 32 0 4 661 23 0 0 0 chr3R 10037348 10037371 -17867682 + AT_rich Low_complexity Low_complexity 1 23 0 4 661 26 0 0 0 chr3R 10037396 10037422 -17867631 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 21 36 0 0 chr3R 10037763 10037791 -17867262 + AT_rich Low_complexity Low_complexity 1 28 0 4 661 183 100 0 0 chr3R 10038687 10038717 -17866336 + (A)n Simple_repeat Simple_repeat 1 30 0 4 661 269 288 0 0 chr3R 10039864 10039944 -17865109 + (TGG)n Simple_repeat Simple_repeat 2 81 0 4 661 33 0 0 0 chr3R 10044484 10044517 -17860536 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 24 32 0 0 chr3R 10048437 10048468 -17856585 + AT_rich Low_complexity Low_complexity 1 31 0 4 661 219 133 0 0 chr3R 10048895 10048940 -17856113 + (TGG)n Simple_repeat Simple_repeat 1 45 0 4 661 22 56 0 0 chr3R 10055032 10055068 -17849985 + AT_rich Low_complexity Low_complexity 1 36 0 4 661 26 0 0 0 chr3R 10056374 10056400 -17848653 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 22 35 0 0 chr3R 10056873 10056902 -17848151 + AT_rich Low_complexity Low_complexity 1 29 0 4 661 31 26 0 0 chr3R 10060513 10060551 -17844502 + AT_rich Low_complexity Low_complexity 1 38 0 4 661 36 0 0 0 chr3R 10062675 10062711 -17842342 + AT_rich Low_complexity Low_complexity 1 36 0 4 661 4969 7 35 0 chr3R 10062711 10063285 -17841768 - IDEFIX_LTR LTR Gypsy 0 594 1 4 661 49463 9 0 1 chr3R 10063285 10068920 -17836133 - IDEFIX_I LTR Gypsy 0 5628 1 4 661 25 0 0 0 chr3R 10069362 10069387 -17835666 + AT_rich Low_complexity Low_complexity 1 25 0 4 661 4969 7 35 0 chr3R 10069577 10070151 -17834902 - IDEFIX_LTR LTR Gypsy 0 594 1 4 661 248 108 0 0 chr3R 10070119 10070156 -17834897 + BARI1 DNA Tc1 3 39 -1711 4 661 229 204 0 0 chr3R 10071955 10072004 -17833049 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 661 13115 3 0 10 chr3R 10072161 10073597 -17831456 + LINEJ1_DM LINE Jockey 3600 5020 0 4 661 28 61 0 0 chr3R 10074620 10074669 -17830384 + AT_rich Low_complexity Low_complexity 1 49 0 4 661 241 197 64 26 chr3R 10076177 10076255 -17828798 + DNAREP1_DM LINE Penelope 432 512 -82 4 661 21 57 0 0 chr3R 10077816 10077851 -17827202 + AT_rich Low_complexity Low_complexity 1 35 0 4 661 183 80 0 0 chr3R 10078304 10078329 -17826724 + (CACTG)n Simple_repeat Simple_repeat 5 29 0 4 661 26 0 0 0 chr3R 10081715 10081741 -17823312 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 280 217 43 0 chr3R 10082510 10082579 -17822474 + (CTA)n Simple_repeat Simple_repeat 2 73 0 4 661 192 40 0 0 chr3R 10083457 10083482 -17821571 + (T)n Simple_repeat Simple_repeat 1 25 0 4 661 33 25 0 0 chr3R 10084620 10084660 -17820393 + AT_rich Low_complexity Low_complexity 1 40 0 4 661 26 30 0 0 chr3R 10085119 10085152 -17819901 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 21 71 0 0 chr3R 10085815 10085857 -17819196 + AT_rich Low_complexity Low_complexity 1 42 0 4 661 26 30 0 0 chr3R 10085863 10085896 -17819157 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 42 77 0 0 chr3R 10087124 10087215 -17817838 + AT_rich Low_complexity Low_complexity 1 91 0 4 661 204 40 0 0 chr3R 10089568 10089593 -17815460 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 662 210 150 0 0 chr3R 10093213 10093253 -17811800 + (CTG)n Simple_repeat Simple_repeat 3 42 0 4 662 264 273 0 0 chr3R 10100422 10100499 -17804554 + (CAT)n Simple_repeat Simple_repeat 3 79 0 4 662 30 59 0 0 chr3R 10101324 10101375 -17803678 + AT_rich Low_complexity Low_complexity 1 51 0 4 662 25 31 0 0 chr3R 10104078 10104110 -17800943 + AT_rich Low_complexity Low_complexity 1 32 0 4 662 180 0 0 0 chr3R 10104591 10104611 -17800442 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 662 198 191 0 0 chr3R 10104815 10104862 -17800191 + (TTG)n Simple_repeat Simple_repeat 3 49 0 4 662 211 176 0 0 chr3R 10105125 10105159 -17799894 + (CACCAT)n Simple_repeat Simple_repeat 4 37 0 4 662 207 111 0 27 chr3R 10105532 10105569 -17799484 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 4 662 21 0 0 0 chr3R 10105662 10105683 -17799370 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 21 0 0 0 chr3R 10106088 10106109 -17798944 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 207 0 0 0 chr3R 10108608 10108631 -17796422 + (GA)n Simple_repeat Simple_repeat 1 23 0 4 662 255 114 0 0 chr3R 10111030 10111074 -17793979 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 662 213 214 0 0 chr3R 10112329 10112371 -17792682 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 662 258 169 35 24 chr3R 10113584 10113669 -17791384 + (TAA)n Simple_repeat Simple_repeat 2 87 0 4 662 201 138 0 0 chr3R 10115125 10115154 -17789899 + (TCG)n Simple_repeat Simple_repeat 1 29 0 4 662 21 0 0 0 chr3R 10117053 10117074 -17787979 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 217 51 51 0 chr3R 10117703 10117742 -17787311 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 4 662 24 0 0 0 chr3R 10118415 10118439 -17786614 + AT_rich Low_complexity Low_complexity 1 24 0 4 662 23 0 0 0 chr3R 10120426 10120449 -17784604 + AT_rich Low_complexity Low_complexity 1 23 0 4 662 280 138 0 49 chr3R 10126378 10126439 -17778614 + ROO_I LTR Pao 651 708 -7548 4 662 23 54 0 0 chr3R 10130266 10130303 -17774750 + AT_rich Low_complexity Low_complexity 1 37 0 4 662 28 29 0 0 chr3R 10138110 10138145 -17766908 + AT_rich Low_complexity Low_complexity 1 35 0 4 662 34 24 0 0 chr3R 10139496 10139537 -17765516 + AT_rich Low_complexity Low_complexity 1 41 0 4 662 23 33 0 0 chr3R 10139729 10139759 -17765294 + AT_rich Low_complexity Low_complexity 1 30 0 4 662 201 158 53 0 chr3R 10139918 10139975 -17765078 + (TA)n Simple_repeat Simple_repeat 1 60 0 4 662 200 189 0 0 chr3R 10143736 10143773 -17761280 + (CGA)n Simple_repeat Simple_repeat 2 38 0 4 662 204 40 0 0 chr3R 10145345 10145370 -17759683 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4 662 207 204 0 0 chr3R 10147234 10147288 -17757765 + (CAA)n Simple_repeat Simple_repeat 3 56 0 4 662 239 200 23 70 chr3R 10147746 10147832 -17757221 - ROO_I LTR Pao -7511 745 664 4 662 186 150 0 0 chr3R 10148792 10148832 -17756221 + (CTG)n Simple_repeat Simple_repeat 1 40 0 4 662 271 272 0 24 chr3R 10149635 10149718 -17755335 + (TTG)n Simple_repeat Simple_repeat 1 81 0 4 662 213 197 32 16 chr3R 10152121 10152183 -17752870 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 662 204 40 0 0 chr3R 10156022 10156047 -17749006 + (TCC)n Simple_repeat Simple_repeat 2 26 0 4 662 23 0 0 0 chr3R 10161975 10161998 -17743055 + AT_rich Low_complexity Low_complexity 1 23 0 4 662 26 30 0 0 chr3R 10162007 10162040 -17743013 + AT_rich Low_complexity Low_complexity 1 33 0 4 662 22 35 0 0 chr3R 10163132 10163161 -17741892 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 199 54 0 51 chr3R 10163680 10163719 -17741334 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 662 234 143 15 31 chr3R 10164484 10164549 -17740504 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 662 180 77 0 0 chr3R 10164709 10164735 -17740318 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 662 236 53 26 0 chr3R 10165836 10165874 -17739179 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 662 204 150 25 0 chr3R 10168405 10168460 -17736593 + (CAA)n Simple_repeat Simple_repeat 1 56 0 4 662 180 111 0 0 chr3R 10170088 10170115 -17734938 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 662 204 130 0 61 chr3R 10170411 10170460 -17734593 + (CTG)n Simple_repeat Simple_repeat 1 46 0 4 662 480 140 0 0 chr3R 10170709 10170802 -17734251 + (CTG)n Simple_repeat Simple_repeat 1 93 0 4 662 261 254 0 27 chr3R 10172919 10172992 -17732061 + GA-rich Low_complexity Low_complexity 1 71 0 4 662 22 0 0 0 chr3R 10173234 10173256 -17731797 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 22 35 0 0 chr3R 10174406 10174435 -17730618 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 198 0 0 0 chr3R 10174563 10174585 -17730468 + (TTTTC)n Simple_repeat Simple_repeat 1 22 0 4 662 231 88 0 0 chr3R 10174827 10174861 -17730192 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 662 21 0 0 0 chr3R 10176962 10176983 -17728070 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 22 0 0 0 chr3R 10176989 10177011 -17728042 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 201 162 0 0 chr3R 10178124 10178161 -17726892 + T-rich Low_complexity Low_complexity 4 40 0 4 662 31 58 0 0 chr3R 10179578 10179630 -17725423 + AT_rich Low_complexity Low_complexity 1 52 0 4 662 195 100 0 0 chr3R 10183028 10183058 -17721995 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 662 24 67 0 0 chr3R 10186932 10186977 -17718076 + AT_rich Low_complexity Low_complexity 1 45 0 4 662 273 155 0 0 chr3R 10187889 10187947 -17717106 + (ACTG)n Simple_repeat Simple_repeat 2 59 0 4 662 24 53 0 0 chr3R 10188324 10188362 -17716691 + AT_rich Low_complexity Low_complexity 1 38 0 4 662 324 0 0 0 chr3R 10189160 10189196 -17715857 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 662 189 107 0 0 chr3R 10189363 10189391 -17715662 + (TATG)n Simple_repeat Simple_repeat 1 28 0 4 662 211 227 0 0 chr3R 10189650 10189694 -17715359 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 4 662 226 295 0 0 chr3R 10193091 10193169 -17711884 + T-rich Low_complexity Low_complexity 1 78 0 4 662 23 54 0 0 chr3R 10193360 10193397 -17711656 + AT_rich Low_complexity Low_complexity 1 37 0 4 662 24 0 0 0 chr3R 10193619 10193643 -17711410 + AT_rich Low_complexity Low_complexity 1 24 0 4 662 216 95 71 0 chr3R 10194296 10194338 -17710715 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 4 662 221 281 0 0 chr3R 10194568 10194625 -17710428 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 662 263 177 0 16 chr3R 10195060 10195123 -17709930 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 662 232 250 14 27 chr3R 10195341 10195415 -17709638 + (TTG)n Simple_repeat Simple_repeat 3 75 0 4 662 325 141 28 0 chr3R 10195776 10195847 -17709206 + (CTG)n Simple_repeat Simple_repeat 2 74 0 4 662 261 234 0 0 chr3R 10195999 10196063 -17708990 + GA-rich Low_complexity Low_complexity 2 65 0 4 662 201 159 0 0 chr3R 10196860 10196904 -17708149 + (TTTCG)n Simple_repeat Simple_repeat 5 48 0 4 662 183 167 0 0 chr3R 10197096 10197138 -17707915 + T-rich Low_complexity Low_complexity 1 42 0 4 662 22 0 0 0 chr3R 10197146 10197168 -17707885 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 192 125 0 0 chr3R 10198502 10198534 -17706519 + (ATG)n Simple_repeat Simple_repeat 1 32 0 4 662 232 288 0 15 chr3R 10198745 10198812 -17706241 + (CTG)n Simple_repeat Simple_repeat 3 68 0 4 662 215 236 18 0 chr3R 10199270 10199325 -17705728 + CT-rich Low_complexity Low_complexity 1 56 0 4 662 202 205 0 0 chr3R 10199459 10199498 -17705555 + CT-rich Low_complexity Low_complexity 2 40 0 4 662 24 32 0 0 chr3R 10199672 10199703 -17705350 + AT_rich Low_complexity Low_complexity 1 31 0 4 662 276 111 0 0 chr3R 10201568 10201613 -17703440 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 662 226 270 16 0 chr3R 10201821 10201884 -17703169 + (CAG)n Simple_repeat Simple_repeat 1 64 0 4 662 201 39 0 0 chr3R 10204765 10204791 -17700262 + (CAATT)n Simple_repeat Simple_repeat 5 30 0 4 662 342 45 0 0 chr3R 10204825 10204869 -17700184 + (CAA)n Simple_repeat Simple_repeat 1 44 0 4 662 36 0 0 0 chr3R 10205350 10205386 -17699667 + AT_rich Low_complexity Low_complexity 1 36 0 4 662 201 263 0 0 chr3R 10205542 10205599 -17699454 + (TTG)n Simple_repeat Simple_repeat 1 57 0 4 662 240 180 20 0 chr3R 10205643 10205693 -17699360 + DOC3_DM LINE Jockey 512 562 -4178 4 662 180 111 0 0 chr3R 10208118 10208145 -17696908 + (GAGTG)n Simple_repeat Simple_repeat 3 29 0 4 662 288 53 0 0 chr3R 10208255 10208293 -17696760 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 662 230 222 48 0 chr3R 10208900 10208963 -17696090 + (GGTTG)n Simple_repeat Simple_repeat 3 68 0 4 662 195 100 0 0 chr3R 10209886 10209916 -17695137 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 4 662 29 0 0 0 chr3R 10210185 10210214 -17694839 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 29 0 0 0 chr3R 10211903 10211932 -17693121 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 180 77 0 0 chr3R 10212326 10212352 -17692701 + (CACTC)n Simple_repeat Simple_repeat 5 30 0 4 662 21 36 0 0 chr3R 10214415 10214443 -17690610 + AT_rich Low_complexity Low_complexity 1 28 0 4 662 183 129 0 0 chr3R 10215825 10215856 -17689197 + (TTG)n Simple_repeat Simple_repeat 1 31 0 4 662 22 0 0 0 chr3R 10215915 10215937 -17689116 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 258 32 0 0 chr3R 10217640 10217671 -17687382 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 662 33 25 0 0 chr3R 10218868 10218908 -17686145 + AT_rich Low_complexity Low_complexity 1 40 0 4 663 22 0 0 0 chr3R 10223743 10223765 -17681288 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 209 208 0 0 chr3R 10224414 10224462 -17680591 + A-rich Low_complexity Low_complexity 1 48 0 4 663 209 204 0 0 chr3R 10224708 10224752 -17680301 + (GATTG)n Simple_repeat Simple_repeat 5 48 0 4 663 183 114 0 0 chr3R 10224943 10224978 -17680075 + (T)n Simple_repeat Simple_repeat 1 35 0 4 663 219 69 0 0 chr3R 10225517 10225546 -17679507 + (GA)n Simple_repeat Simple_repeat 2 30 0 4 663 182 37 37 0 chr3R 10227135 10227162 -17677891 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 663 192 40 0 0 chr3R 10228197 10228222 -17676831 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 663 180 77 0 0 chr3R 10229931 10229957 -17675096 + (ATG)n Simple_repeat Simple_repeat 3 28 0 4 663 240 35 0 0 chr3R 10231317 10231346 -17673707 + (TTCTG)n Simple_repeat Simple_repeat 4 32 0 4 663 183 80 0 0 chr3R 10231533 10231558 -17673495 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 4 663 218 32 32 0 chr3R 10232949 10232980 -17672073 + (CAT)n Simple_repeat Simple_repeat 1 32 0 4 663 28 29 0 0 chr3R 10236242 10236277 -17668776 + AT_rich Low_complexity Low_complexity 1 35 0 4 663 282 169 36 12 chr3R 10237134 10237218 -17667835 - ROO_I LTR Pao -7534 722 637 4 663 22 35 0 0 chr3R 10238625 10238654 -17666399 + AT_rich Low_complexity Low_complexity 1 29 0 4 663 204 40 0 0 chr3R 10241556 10241581 -17663472 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 4 663 278 200 15 0 chr3R 10242544 10242609 -17662444 + (CTG)n Simple_repeat Simple_repeat 1 66 0 4 663 189 121 0 0 chr3R 10244645 10244678 -17660375 + (CAG)n Simple_repeat Simple_repeat 1 33 0 4 663 237 33 0 0 chr3R 10247269 10247299 -17657754 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 663 49 0 0 0 chr3R 10247734 10247783 -17657270 + AT_rich Low_complexity Low_complexity 1 49 0 4 663 231 263 0 0 chr3R 10253244 10253301 -17651752 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 663 236 131 0 21 chr3R 10253323 10253370 -17651683 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 663 21 36 0 0 chr3R 10254873 10254901 -17650152 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 201 39 0 0 chr3R 10256620 10256646 -17648407 + (T)n Simple_repeat Simple_repeat 1 26 0 4 663 225 132 0 0 chr3R 10257761 10257799 -17647254 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 663 205 309 0 0 chr3R 10257927 10257982 -17647071 + (CTG)n Simple_repeat Simple_repeat 2 56 0 4 663 211 300 0 0 chr3R 10258057 10258117 -17646936 + (TTG)n Simple_repeat Simple_repeat 2 61 0 4 663 320 210 0 46 chr3R 10258258 10258388 -17646665 + (CTG)n Simple_repeat Simple_repeat 2 125 0 4 663 27 29 0 0 chr3R 10260300 10260334 -17644719 + AT_rich Low_complexity Low_complexity 1 34 0 4 663 23 0 0 0 chr3R 10260518 10260541 -17644512 + AT_rich Low_complexity Low_complexity 1 23 0 4 663 189 147 0 0 chr3R 10261949 10261983 -17643070 + (CAAT)n Simple_repeat Simple_repeat 1 34 0 4 663 205 222 0 36 chr3R 10266121 10266177 -17638876 + (TCTG)n Simple_repeat Simple_repeat 1 54 0 4 663 204 167 0 0 chr3R 10266739 10266787 -17638266 + A-rich Low_complexity Low_complexity 1 48 0 4 663 234 267 0 0 chr3R 10267520 10267580 -17637473 + (TTG)n Simple_repeat Simple_repeat 1 60 0 4 663 21 36 0 0 chr3R 10268960 10268988 -17636065 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 22 0 0 0 chr3R 10269143 10269165 -17635888 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 290 283 20 0 chr3R 10271835 10271934 -17633119 + ROO_I LTR Pao 644 744 -7512 4 663 201 184 0 20 chr3R 10273141 10273191 -17631862 + CT-rich Low_complexity Low_complexity 2 50 0 4 663 207 152 0 0 chr3R 10275490 10275536 -17629517 + (ACTG)n Simple_repeat Simple_repeat 4 49 0 4 663 456 51 0 0 chr3R 10277132 10277191 -17627862 + (CAG)n Simple_repeat Simple_repeat 1 59 0 4 663 234 0 0 0 chr3R 10279337 10279363 -17625690 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 663 22 0 0 0 chr3R 10281328 10281350 -17623703 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 294 215 0 0 chr3R 10282825 10282904 -17622149 + (TCTG)n Simple_repeat Simple_repeat 3 81 0 4 663 213 139 0 0 chr3R 10282946 10282989 -17622064 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 4 663 182 62 0 30 chr3R 10287878 10287911 -17617142 + (CAGG)n Simple_repeat Simple_repeat 1 32 0 4 663 30 27 0 0 chr3R 10288822 10288859 -17616194 + AT_rich Low_complexity Low_complexity 1 37 0 4 663 25 0 0 0 chr3R 10289911 10289936 -17615117 + AT_rich Low_complexity Low_complexity 1 25 0 4 663 201 94 0 0 chr3R 10291519 10291551 -17613502 + (T)n Simple_repeat Simple_repeat 1 32 0 4 663 230 229 16 0 chr3R 10292492 10292553 -17612500 + (CAG)n Simple_repeat Simple_repeat 1 62 0 4 663 279 179 39 69 chr3R 10293788 10293890 -17611163 - ROO_I LTR Pao -7522 734 636 4 663 231 170 0 0 chr3R 10293894 10293941 -17611112 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 4 663 335 73 18 0 chr3R 10294129 10294184 -17610869 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 663 251 194 36 27 chr3R 10294533 10294644 -17610409 + ROO_I LTR Pao 646 757 -7499 4 663 252 59 0 0 chr3R 10298906 10298940 -17606113 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 663 252 292 0 0 chr3R 10306697 10306769 -17598284 + GA-rich Low_complexity Low_complexity 1 72 0 4 663 21 0 0 0 chr3R 10306833 10306854 -17598199 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 23 33 0 0 chr3R 10312323 10312353 -17592700 + AT_rich Low_complexity Low_complexity 1 30 0 4 663 189 107 0 0 chr3R 10312711 10312739 -17592314 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 4 663 246 105 0 0 chr3R 10315953 10315991 -17589062 + (AGTTG)n Simple_repeat Simple_repeat 5 42 0 4 663 21 82 0 0 chr3R 10316786 10316835 -17588218 + AT_rich Low_complexity Low_complexity 1 49 0 4 663 232 97 0 0 chr3R 10317217 10317248 -17587805 + TART_B1 LINE telomeric 56 86 -10568 4 663 198 103 0 0 chr3R 10317499 10317528 -17587525 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 4 663 30 27 0 0 chr3R 10320834 10320871 -17584182 + AT_rich Low_complexity Low_complexity 1 37 0 4 663 216 179 0 0 chr3R 10325760 10325799 -17579254 + (TTG)n Simple_repeat Simple_repeat 1 39 0 4 663 21 0 0 0 chr3R 10326554 10326575 -17578478 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 210 37 0 0 chr3R 10328728 10328755 -17576298 + (CTG)n Simple_repeat Simple_repeat 1 27 0 4 663 246 105 0 0 chr3R 10328796 10328834 -17576219 + (CGGA)n Simple_repeat Simple_repeat 4 41 0 4 663 26 30 0 0 chr3R 10328883 10328916 -17576137 + AT_rich Low_complexity Low_complexity 1 33 0 4 663 232 218 13 13 chr3R 10330736 10330815 -17574238 + ROO_I LTR Pao 655 733 -7523 4 663 22 0 0 0 chr3R 10331071 10331093 -17573960 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 245 300 10 0 chr3R 10331206 10331306 -17573747 + (TTG)n Simple_repeat Simple_repeat 3 103 0 4 663 21 0 0 0 chr3R 10333847 10333868 -17571185 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 237 132 0 0 chr3R 10334624 10334662 -17570391 + (CAG)n Simple_repeat Simple_repeat 1 38 0 4 663 25 0 0 0 chr3R 10334995 10335020 -17570033 + AT_rich Low_complexity Low_complexity 1 25 0 4 663 276 130 0 0 chr3R 10335324 10335370 -17569683 + (CGGA)n Simple_repeat Simple_repeat 2 47 0 4 663 21 36 0 0 chr3R 10339286 10339314 -17565739 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 384 88 0 0 chr3R 10340617 10340674 -17564379 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 4 663 23 54 0 0 chr3R 10341010 10341047 -17564006 + AT_rich Low_complexity Low_complexity 1 37 0 4 663 22 0 0 0 chr3R 10343170 10343192 -17561861 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 21 0 0 0 chr3R 10349904 10349925 -17555128 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 21 0 0 0 chr3R 10351331 10351352 -17553701 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 31 0 0 0 chr3R 10352744 10352775 -17552278 + AT_rich Low_complexity Low_complexity 1 31 0 4 663 288 137 0 0 chr3R 10353154 10353205 -17551848 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 664 192 40 0 0 chr3R 10359999 10360024 -17545029 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 664 39 60 0 0 chr3R 10361944 10362011 -17543042 + AT_rich Low_complexity Low_complexity 1 67 0 4 664 210 71 0 0 chr3R 10363808 10363836 -17541217 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 664 21 0 0 0 chr3R 10364585 10364606 -17540447 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 202 150 25 0 chr3R 10365624 10365664 -17539389 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 4 664 31 68 0 0 chr3R 10370399 10370458 -17534595 + AT_rich Low_complexity Low_complexity 1 59 0 4 664 200 232 0 28 chr3R 10374886 10374957 -17530096 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 664 37 39 0 0 chr3R 10376037 10376088 -17528965 + AT_rich Low_complexity Low_complexity 1 51 0 4 664 192 40 0 0 chr3R 10378206 10378231 -17526822 + (T)n Simple_repeat Simple_repeat 1 25 0 4 664 186 71 0 0 chr3R 10383314 10383342 -17521711 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 4 664 28 29 0 0 chr3R 10387192 10387227 -17517826 + AT_rich Low_complexity Low_complexity 1 35 0 4 664 23 33 0 0 chr3R 10387319 10387349 -17517704 + AT_rich Low_complexity Low_complexity 1 30 0 4 664 28 0 0 0 chr3R 10388738 10388766 -17516287 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 250 26 25 25 chr3R 10389390 10389430 -17515623 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 664 27 62 0 0 chr3R 10389712 10389760 -17515293 + AT_rich Low_complexity Low_complexity 1 48 0 4 664 241 182 0 0 chr3R 10390906 10390950 -17514103 + DNAREP1_DM LINE Penelope 16 59 -535 4 664 27 49 0 0 chr3R 10391020 10391061 -17513992 + AT_rich Low_complexity Low_complexity 1 41 0 4 664 21 0 0 0 chr3R 10394841 10394862 -17510191 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 198 0 0 0 chr3R 10402826 10402848 -17502205 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 664 239 114 23 0 chr3R 10403997 10404041 -17501012 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 664 21 36 0 0 chr3R 10404385 10404413 -17500640 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 28 71 0 0 chr3R 10405497 10405553 -17499500 + AT_rich Low_complexity Low_complexity 1 56 0 4 664 21 0 0 0 chr3R 10406187 10406208 -17498845 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 205 186 0 0 chr3R 10406960 10407003 -17498050 + T-rich Low_complexity Low_complexity 1 43 0 4 664 28 29 0 0 chr3R 10408700 10408735 -17496318 + AT_rich Low_complexity Low_complexity 1 35 0 4 664 23 54 0 0 chr3R 10409054 10409091 -17495962 + AT_rich Low_complexity Low_complexity 1 37 0 4 664 26 0 0 0 chr3R 10410463 10410489 -17494564 + AT_rich Low_complexity Low_complexity 1 26 0 4 664 29 0 0 0 chr3R 10416988 10417017 -17488036 + AT_rich Low_complexity Low_complexity 1 29 0 4 664 26 0 0 0 chr3R 10422044 10422070 -17482983 + AT_rich Low_complexity Low_complexity 1 26 0 4 664 180 111 0 0 chr3R 10422296 10422323 -17482730 + (CGA)n Simple_repeat Simple_repeat 3 29 0 4 664 180 0 0 0 chr3R 10423265 10423285 -17481768 + (A)n Simple_repeat Simple_repeat 1 20 0 4 664 23 33 0 0 chr3R 10423830 10423860 -17481193 + AT_rich Low_complexity Low_complexity 1 30 0 4 664 291 150 0 0 chr3R 10424086 10424146 -17480907 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 664 25 51 0 0 chr3R 10428653 10428692 -17476361 + AT_rich Low_complexity Low_complexity 1 39 0 4 664 25 31 0 0 chr3R 10430343 10430375 -17474678 + AT_rich Low_complexity Low_complexity 1 32 0 4 664 21 0 0 0 chr3R 10433778 10433799 -17471254 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 24 85 0 0 chr3R 10434984 10435043 -17470010 + AT_rich Low_complexity Low_complexity 1 59 0 4 664 186 43 0 0 chr3R 10437028 10437051 -17468002 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 4 664 27 49 0 0 chr3R 10440386 10440427 -17464626 + AT_rich Low_complexity Low_complexity 1 41 0 4 664 224 217 0 0 chr3R 10440567 10440613 -17464440 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 664 29 28 0 0 chr3R 10442847 10442883 -17462170 + AT_rich Low_complexity Low_complexity 1 36 0 4 664 22 35 0 0 chr3R 10444564 10444593 -17460460 + AT_rich Low_complexity Low_complexity 1 29 0 4 664 202 189 0 36 chr3R 10445985 10446040 -17459013 + A-rich Low_complexity Low_complexity 2 54 0 4 664 207 157 0 0 chr3R 10448804 10448855 -17456198 + A-rich Low_complexity Low_complexity 1 51 0 4 664 201 175 0 0 chr3R 10450201 10450241 -17454812 + (CAA)n Simple_repeat Simple_repeat 2 41 0 4 664 264 111 0 0 chr3R 10453677 10453722 -17451331 + (TCC)n Simple_repeat Simple_repeat 1 45 0 4 664 22 0 0 0 chr3R 10458007 10458029 -17447024 + AT_rich Low_complexity Low_complexity 1 22 0 4 664 291 264 0 0 chr3R 10468472 10468563 -17436490 + T-rich Low_complexity Low_complexity 1 91 0 4 664 185 167 19 0 chr3R 10469732 10469786 -17435267 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 664 250 216 0 0 chr3R 10469828 10469879 -17435174 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 664 213 216 0 0 chr3R 10470689 10470726 -17434327 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 664 225 180 0 0 chr3R 10471463 10471513 -17433540 + (TTG)n Simple_repeat Simple_repeat 1 50 0 4 664 223 231 0 0 chr3R 10473839 10473891 -17431162 + (CTG)n Simple_repeat Simple_repeat 3 54 0 4 664 271 156 0 0 chr3R 10474840 10474904 -17430149 - ROO_I LTR Pao -7528 728 665 4 664 203 254 0 0 chr3R 10475222 10475277 -17429776 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 664 21 0 0 0 chr3R 10479680 10479701 -17425352 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 256 83 0 0 chr3R 10481747 10481783 -17423270 - DNAREP1_DM LINE Penelope 0 594 559 4 664 494 174 91 115 chr3R 10481846 10482054 -17422999 - DNAREP1_DM LINE Penelope -391 203 1 4 665 31 58 0 0 chr3R 10489000 10489052 -17416001 + AT_rich Low_complexity Low_complexity 1 52 0 4 665 237 119 0 0 chr3R 10489428 10489470 -17415583 + (GGA)n Simple_repeat Simple_repeat 1 42 0 4 665 235 303 0 52 chr3R 10489845 10489960 -17415093 + GA-rich Low_complexity Low_complexity 1 109 0 4 665 21 0 0 0 chr3R 10501347 10501368 -17403685 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 26 50 0 0 chr3R 10503279 10503319 -17401734 + AT_rich Low_complexity Low_complexity 1 40 0 4 665 183 80 0 0 chr3R 10507457 10507482 -17397571 + (TTTCC)n Simple_repeat Simple_repeat 1 25 0 4 665 188 163 0 23 chr3R 10508553 10508597 -17396456 + (TATG)n Simple_repeat Simple_repeat 1 43 0 4 665 28 71 0 0 chr3R 10510457 10510513 -17394540 + AT_rich Low_complexity Low_complexity 1 56 0 4 665 21 0 0 0 chr3R 10512571 10512592 -17392461 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 24 32 0 0 chr3R 10513839 10513870 -17391183 + AT_rich Low_complexity Low_complexity 1 31 0 4 665 264 30 0 0 chr3R 10516566 10516599 -17388454 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 665 21 71 0 0 chr3R 10517386 10517428 -17387625 + AT_rich Low_complexity Low_complexity 1 42 0 4 665 192 40 0 0 chr3R 10517650 10517675 -17387378 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 665 26 82 0 0 chr3R 10521896 10521957 -17383096 + AT_rich Low_complexity Low_complexity 1 61 0 4 665 28 48 0 0 chr3R 10521982 10522024 -17383029 + AT_rich Low_complexity Low_complexity 1 42 0 4 665 30 69 0 0 chr3R 10523225 10523283 -17381770 + AT_rich Low_complexity Low_complexity 1 58 0 4 665 198 0 0 0 chr3R 10523672 10523694 -17381359 + (CATTT)n Simple_repeat Simple_repeat 2 23 0 4 665 21 0 0 0 chr3R 10523917 10523938 -17381115 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 242 227 0 0 chr3R 10524749 10524815 -17380238 + ROO_I LTR Pao 642 707 -7549 4 665 46 0 0 0 chr3R 10525906 10525952 -17379101 + AT_rich Low_complexity Low_complexity 1 46 0 4 665 270 95 0 0 chr3R 10529457 10529499 -17375554 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 4 665 186 103 0 0 chr3R 10530915 10530944 -17374109 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 665 326 140 0 0 chr3R 10532703 10532753 -17372300 + DNAREP1_DM LINE Penelope 20 69 -525 4 665 275 302 17 8 chr3R 10532789 10532804 -17372249 - P_DG DNA P -19 2869 2755 4 665 607 111 40 0 chr3R 10532804 10532903 -17372150 + DNAREP1_DM LINE Penelope 492 594 0 4 665 23 0 0 0 chr3R 10536453 10536476 -17368577 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 216 67 0 0 chr3R 10537090 10537120 -17367933 + (TAG)n Simple_repeat Simple_repeat 2 31 0 4 665 210 156 0 0 chr3R 10537693 10537738 -17367315 + (CATTC)n Simple_repeat Simple_repeat 5 49 0 4 665 189 107 0 0 chr3R 10539918 10539946 -17365107 + (CTG)n Simple_repeat Simple_repeat 2 29 0 4 665 189 107 0 0 chr3R 10540107 10540135 -17364918 + (CAA)n Simple_repeat Simple_repeat 2 29 0 4 665 338 42 21 0 chr3R 10540397 10540445 -17364608 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 665 232 120 40 0 chr3R 10541267 10541317 -17363736 + (CTG)n Simple_repeat Simple_repeat 3 54 0 4 665 243 88 0 0 chr3R 10543578 10543612 -17361441 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 665 205 211 0 19 chr3R 10543931 10543984 -17361069 + A-rich Low_complexity Low_complexity 3 54 0 4 665 211 246 16 0 chr3R 10544302 10544363 -17360690 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 665 211 264 0 0 chr3R 10544838 10544891 -17360162 + (CTG)n Simple_repeat Simple_repeat 1 53 0 4 665 216 163 0 0 chr3R 10545038 10545081 -17359972 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 665 204 224 0 0 chr3R 10545553 10545620 -17359433 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 665 180 158 0 0 chr3R 10548493 10548531 -17356522 + T-rich Low_complexity Low_complexity 1 38 0 4 665 259 183 12 12 chr3R 10549146 10549229 -17355824 + (TTG)n Simple_repeat Simple_repeat 1 83 0 4 665 189 0 0 0 chr3R 10553323 10553344 -17351709 + (TTG)n Simple_repeat Simple_repeat 2 22 0 4 665 228 67 0 0 chr3R 10553376 10553406 -17351647 + (CCAA)n Simple_repeat Simple_repeat 1 30 0 4 665 194 0 0 37 chr3R 10553524 10553551 -17351502 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 665 22 56 0 0 chr3R 10554142 10554178 -17350875 + AT_rich Low_complexity Low_complexity 1 36 0 4 665 24 67 0 0 chr3R 10554219 10554264 -17350789 + AT_rich Low_complexity Low_complexity 1 45 0 4 665 34 0 0 0 chr3R 10555150 10555184 -17349869 + AT_rich Low_complexity Low_complexity 1 34 0 4 665 218 224 20 0 chr3R 10555608 10555657 -17349396 + (CATA)n Simple_repeat Simple_repeat 3 52 0 4 665 21 0 0 0 chr3R 10558243 10558264 -17346789 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 185 0 40 0 chr3R 10558463 10558488 -17346565 + (TAA)n Simple_repeat Simple_repeat 3 28 0 4 665 231 273 0 0 chr3R 10558695 10558772 -17346281 - ROO_I LTR Pao -7528 728 652 4 665 234 136 0 0 chr3R 10558906 10558950 -17346103 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 665 244 315 0 0 chr3R 10559105 10559194 -17345859 + (TTG)n Simple_repeat Simple_repeat 1 89 0 4 665 285 29 0 0 chr3R 10561613 10561647 -17343406 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 665 21 0 0 0 chr3R 10562002 10562023 -17343030 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 23 0 0 0 chr3R 10562187 10562210 -17342843 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 223 211 0 37 chr3R 10563996 10564050 -17341003 + GA-rich Low_complexity Low_complexity 1 52 0 4 665 202 211 0 0 chr3R 10566152 10566204 -17338849 + (TTTG)n Simple_repeat Simple_repeat 4 55 0 4 665 228 170 0 0 chr3R 10568008 10568061 -17336992 + (CAA)n Simple_repeat Simple_repeat 1 53 0 4 665 25 0 0 0 chr3R 10569089 10569114 -17335939 + AT_rich Low_complexity Low_complexity 1 25 0 4 665 270 56 0 0 chr3R 10573776 10573812 -17331241 + (GAGTG)n Simple_repeat Simple_repeat 2 37 0 4 665 26 0 0 0 chr3R 10574121 10574147 -17330906 + AT_rich Low_complexity Low_complexity 1 26 0 4 665 209 33 0 32 chr3R 10575756 10575787 -17329266 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 4 665 23 0 0 0 chr3R 10576227 10576250 -17328803 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 21 36 0 0 chr3R 10580189 10580217 -17324836 + AT_rich Low_complexity Low_complexity 1 28 0 4 665 32 26 0 0 chr3R 10583488 10583527 -17321526 + AT_rich Low_complexity Low_complexity 1 39 0 4 665 214 162 0 0 chr3R 10584078 10584115 -17320938 + (ATTCG)n Simple_repeat Simple_repeat 4 40 0 4 665 22 0 0 0 chr3R 10584247 10584269 -17320784 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 23 33 0 0 chr3R 10585039 10585069 -17319984 + AT_rich Low_complexity Low_complexity 1 30 0 4 665 21 0 0 0 chr3R 10585672 10585693 -17319360 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 269 279 0 0 chr3R 10585965 10586033 -17319020 + (CAA)n Simple_repeat Simple_repeat 3 70 0 4 665 207 190 0 23 chr3R 10586417 10586460 -17318593 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 4 665 202 224 0 0 chr3R 10586763 10586812 -17318241 + A-rich Low_complexity Low_complexity 1 49 0 4 665 435 19 0 0 chr3R 10590336 10590388 -17314665 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 665 243 175 0 0 chr3R 10590880 10590920 -17314133 + (ATGGTG)n Simple_repeat Simple_repeat 4 43 0 4 665 26 30 0 0 chr3R 10595411 10595444 -17309609 + AT_rich Low_complexity Low_complexity 1 33 0 4 665 201 147 0 0 chr3R 10597308 10597342 -17307711 + (CTCA)n Simple_repeat Simple_repeat 2 35 0 4 665 21 0 0 0 chr3R 10597606 10597627 -17307426 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 22 0 0 0 chr3R 10597864 10597886 -17307167 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 228 86 0 0 chr3R 10598585 10598620 -17306433 + (A)n Simple_repeat Simple_repeat 1 35 0 4 665 204 40 0 0 chr3R 10599632 10599657 -17305396 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 665 210 71 0 0 chr3R 10600916 10600944 -17304109 + (CAG)n Simple_repeat Simple_repeat 3 30 0 4 665 26 0 0 0 chr3R 10601912 10601938 -17303115 + AT_rich Low_complexity Low_complexity 1 26 0 4 665 186 43 0 0 chr3R 10602358 10602381 -17302672 + (A)n Simple_repeat Simple_repeat 1 23 0 4 665 216 0 0 0 chr3R 10603867 10603891 -17301162 + (A)n Simple_repeat Simple_repeat 1 24 0 4 665 21 36 0 0 chr3R 10604005 10604033 -17301020 + AT_rich Low_complexity Low_complexity 1 28 0 4 665 22 56 0 0 chr3R 10606918 10606954 -17298099 + AT_rich Low_complexity Low_complexity 1 36 0 4 665 185 0 0 39 chr3R 10607065 10607091 -17297962 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 665 213 39 0 0 chr3R 10607953 10607979 -17297074 + (CAT)n Simple_repeat Simple_repeat 2 27 0 4 665 23 68 0 0 chr3R 10609243 10609287 -17295766 + AT_rich Low_complexity Low_complexity 1 44 0 4 665 21 36 0 0 chr3R 10613691 10613719 -17291334 + AT_rich Low_complexity Low_complexity 1 28 0 4 666 180 152 0 0 chr3R 10618061 10618094 -17286959 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 666 22 0 0 0 chr3R 10618306 10618328 -17286725 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 265 75 19 19 chr3R 10619053 10619107 -17285946 + (CCAA)n Simple_repeat Simple_repeat 4 57 0 4 666 195 42 0 0 chr3R 10619935 10619959 -17285094 + (ATTG)n Simple_repeat Simple_repeat 3 26 0 4 666 23 0 0 0 chr3R 10621568 10621591 -17283462 + AT_rich Low_complexity Low_complexity 1 23 0 4 666 26 30 0 0 chr3R 10623437 10623470 -17281583 + AT_rich Low_complexity Low_complexity 1 33 0 4 666 29 60 0 0 chr3R 10625940 10625990 -17279063 + AT_rich Low_complexity Low_complexity 1 50 0 4 666 222 128 0 0 chr3R 10643331 10643370 -17261683 + (CTG)n Simple_repeat Simple_repeat 3 41 0 4 666 260 266 0 0 chr3R 10643550 10643614 -17261439 + (TTG)n Simple_repeat Simple_repeat 1 64 0 4 666 226 270 16 0 chr3R 10645627 10645690 -17259363 + (TTG)n Simple_repeat Simple_repeat 1 64 0 4 666 225 132 0 0 chr3R 10646758 10646796 -17258257 + (TCC)n Simple_repeat Simple_repeat 2 39 0 4 666 195 69 0 0 chr3R 10650123 10650152 -17254901 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 4 666 198 71 0 0 chr3R 10652508 10652536 -17252517 + (CTG)n Simple_repeat Simple_repeat 1 28 0 4 666 22 0 0 0 chr3R 10653050 10653072 -17251981 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 208 286 0 0 chr3R 10656006 10656076 -17248977 + (CAGAGA)n Simple_repeat Simple_repeat 5 74 0 4 666 187 51 24 71 chr3R 10656253 10656295 -17248758 + (TTG)n Simple_repeat Simple_repeat 1 40 0 4 666 304 284 12 12 chr3R 10656417 10656581 -17248472 + (TTG)n Simple_repeat Simple_repeat 1 164 0 4 666 189 178 0 0 chr3R 10656799 10656844 -17248209 + GA-rich Low_complexity Low_complexity 1 45 0 4 666 26 50 0 0 chr3R 10661013 10661053 -17244000 + AT_rich Low_complexity Low_complexity 1 40 0 4 666 21 0 0 0 chr3R 10664613 10664634 -17240419 + AT_rich Low_complexity Low_complexity 1 21 0 4 666 26 30 0 0 chr3R 10673689 10673722 -17231331 + AT_rich Low_complexity Low_complexity 1 33 0 4 666 32 26 0 0 chr3R 10675592 10675631 -17229422 + AT_rich Low_complexity Low_complexity 1 39 0 4 666 24 0 0 0 chr3R 10677670 10677694 -17227359 + AT_rich Low_complexity Low_complexity 1 24 0 4 666 207 100 0 0 chr3R 10679720 10679750 -17225303 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 666 306 50 0 0 chr3R 10685454 10685494 -17219559 + (CTG)n Simple_repeat Simple_repeat 3 42 0 4 666 22 0 0 0 chr3R 10685792 10685814 -17219239 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 31 26 0 0 chr3R 10687296 10687334 -17217719 + AT_rich Low_complexity Low_complexity 1 38 0 4 666 192 135 0 0 chr3R 10687709 10687746 -17217307 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 666 24 0 0 0 chr3R 10689401 10689425 -17215628 + AT_rich Low_complexity Low_complexity 1 24 0 4 666 246 32 0 0 chr3R 10691227 10691258 -17213795 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 666 212 271 0 0 chr3R 10694089 10694148 -17210905 + T-rich Low_complexity Low_complexity 1 59 0 4 666 26 0 0 0 chr3R 10696563 10696589 -17208464 + AT_rich Low_complexity Low_complexity 1 26 0 4 666 186 103 0 0 chr3R 10703841 10703870 -17201183 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 4 666 204 125 0 0 chr3R 10706086 10706118 -17198935 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 666 22 35 0 0 chr3R 10714742 10714771 -17190282 + AT_rich Low_complexity Low_complexity 1 29 0 4 666 25 31 0 0 chr3R 10719778 10719810 -17185243 + AT_rich Low_complexity Low_complexity 1 32 0 4 666 22 70 0 0 chr3R 10719878 10719921 -17185132 + AT_rich Low_complexity Low_complexity 1 43 0 4 666 22 0 0 0 chr3R 10719931 10719953 -17185100 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 21 57 0 0 chr3R 10724156 10724191 -17180862 + AT_rich Low_complexity Low_complexity 1 35 0 4 666 564 15 0 0 chr3R 10724249 10724314 -17180739 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 666 204 312 0 0 chr3R 10725230 10725294 -17179759 + (CGA)n Simple_repeat Simple_repeat 2 65 0 4 666 267 222 28 0 chr3R 10735201 10735273 -17169780 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 666 194 0 39 0 chr3R 10737590 10737616 -17167437 + (TATG)n Simple_repeat Simple_repeat 2 28 0 4 666 21 0 0 0 chr3R 10742731 10742752 -17162301 + AT_rich Low_complexity Low_complexity 1 21 0 4 666 21 36 0 0 chr3R 10742825 10742853 -17162200 + AT_rich Low_complexity Low_complexity 1 28 0 4 666 210 37 0 0 chr3R 10744307 10744334 -17160719 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 4 666 24 0 0 0 chr3R 10744451 10744475 -17160578 + AT_rich Low_complexity Low_complexity 1 24 0 4 666 26 0 0 0 chr3R 10747808 10747834 -17157219 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 213 132 0 0 chr3R 10749307 10749345 -17155708 + (TCCG)n Simple_repeat Simple_repeat 3 40 0 4 667 37 52 0 0 chr3R 10749920 10749978 -17155075 + AT_rich Low_complexity Low_complexity 1 58 0 4 667 21 0 0 0 chr3R 10750650 10750671 -17154382 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 227 103 0 0 chr3R 10752826 10752855 -17152198 - DNAREP1_DM LINE Penelope -534 60 32 4 667 25 51 0 0 chr3R 10753596 10753635 -17151418 + AT_rich Low_complexity Low_complexity 1 39 0 4 667 26 74 0 0 chr3R 10754048 10754102 -17150951 + AT_rich Low_complexity Low_complexity 1 54 0 4 667 26 0 0 0 chr3R 10754410 10754436 -17150617 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 26 50 0 0 chr3R 10754776 10754816 -17150237 + AT_rich Low_complexity Low_complexity 1 40 0 4 667 228 163 23 0 chr3R 10756756 10756799 -17148254 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 667 21 57 0 0 chr3R 10758393 10758428 -17146625 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 186 43 0 0 chr3R 10759116 10759139 -17145914 + (TGAG)n Simple_repeat Simple_repeat 1 23 0 4 667 348 156 26 0 chr3R 10759524 10759601 -17145452 - DNAREP1_DM LINE Penelope -339 255 177 4 667 23 0 0 0 chr3R 10762443 10762466 -17142587 + AT_rich Low_complexity Low_complexity 1 23 0 4 667 208 222 0 0 chr3R 10763152 10763197 -17141856 + (TTCGG)n Simple_repeat Simple_repeat 5 49 0 4 667 27 49 0 0 chr3R 10764307 10764348 -17140705 + AT_rich Low_complexity Low_complexity 1 41 0 4 667 26 64 0 0 chr3R 10765274 10765321 -17139732 + AT_rich Low_complexity Low_complexity 1 47 0 4 667 27 29 0 0 chr3R 10765370 10765404 -17139649 + AT_rich Low_complexity Low_complexity 1 34 0 4 667 21 57 0 0 chr3R 10766848 10766883 -17138170 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 25 51 0 0 chr3R 10767372 10767411 -17137642 + AT_rich Low_complexity Low_complexity 1 39 0 4 667 229 170 0 36 chr3R 10767681 10767736 -17137317 + T-rich Low_complexity Low_complexity 3 55 0 4 667 24 0 0 0 chr3R 10769326 10769350 -17135703 + AT_rich Low_complexity Low_complexity 1 24 0 4 667 27 62 0 0 chr3R 10770382 10770430 -17134623 + AT_rich Low_complexity Low_complexity 1 48 0 4 667 321 145 0 0 chr3R 10770639 10770701 -17134352 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 667 218 95 0 23 chr3R 10772113 10772156 -17132897 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 667 208 193 0 34 chr3R 10772307 10772366 -17132687 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 667 37 39 0 0 chr3R 10774256 10774307 -17130746 + AT_rich Low_complexity Low_complexity 1 51 0 4 667 252 59 0 0 chr3R 10775046 10775080 -17129973 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 667 31 58 0 0 chr3R 10776039 10776091 -17128962 + AT_rich Low_complexity Low_complexity 1 52 0 4 667 203 296 0 0 chr3R 10776478 10776549 -17128504 + (CACCAT)n Simple_repeat Simple_repeat 5 75 0 4 667 21 0 0 0 chr3R 10780735 10780756 -17124297 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 35 0 0 0 chr3R 10782013 10782048 -17123005 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 183 42 0 0 chr3R 10782418 10782442 -17122611 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 4 667 180 0 0 0 chr3R 10782670 10782690 -17122363 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 667 27 29 0 0 chr3R 10784356 10784390 -17120663 + AT_rich Low_complexity Low_complexity 1 34 0 4 667 252 312 0 0 chr3R 10784535 10784615 -17120438 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 667 25 95 0 0 chr3R 10785022 10785096 -17119957 + AT_rich Low_complexity Low_complexity 1 74 0 4 667 28 29 0 0 chr3R 10786890 10786925 -17118128 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 49 43 0 0 chr3R 10787599 10787669 -17117384 + AT_rich Low_complexity Low_complexity 1 70 0 4 667 40 59 0 0 chr3R 10787995 10788063 -17116990 + AT_rich Low_complexity Low_complexity 1 68 0 4 667 21 0 0 0 chr3R 10793673 10793694 -17111359 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 26 0 0 0 chr3R 10793819 10793845 -17111208 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 202 231 15 15 chr3R 10795804 10795870 -17109183 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 667 183 80 0 0 chr3R 10797246 10797271 -17107782 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 667 44 56 0 0 chr3R 10801783 10801855 -17103198 + AT_rich Low_complexity Low_complexity 1 72 0 4 667 22 0 0 0 chr3R 10806310 10806332 -17098721 + AT_rich Low_complexity Low_complexity 1 22 0 4 667 29 28 0 0 chr3R 10808029 10808065 -17096988 + AT_rich Low_complexity Low_complexity 1 36 0 4 667 24 0 0 0 chr3R 10809497 10809521 -17095532 + AT_rich Low_complexity Low_complexity 1 24 0 4 667 285 109 0 0 chr3R 10812025 10812071 -17092982 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 667 21 0 0 0 chr3R 10812509 10812530 -17092523 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 25 51 0 0 chr3R 10818766 10818805 -17086248 + AT_rich Low_complexity Low_complexity 1 39 0 4 667 240 59 0 0 chr3R 10818941 10818975 -17086078 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 667 261 270 0 0 chr3R 10819066 10819129 -17085924 + (CTG)n Simple_repeat Simple_repeat 3 65 0 4 667 22 35 0 0 chr3R 10819260 10819289 -17085764 + AT_rich Low_complexity Low_complexity 1 29 0 4 667 33 80 0 0 chr3R 10822350 10822425 -17082628 + AT_rich Low_complexity Low_complexity 1 75 0 4 667 189 107 0 0 chr3R 10825705 10825733 -17079320 + (CAAAAA)n Simple_repeat Simple_repeat 5 32 0 4 667 21 57 0 0 chr3R 10826907 10826942 -17078111 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 22 80 0 0 chr3R 10828138 10828188 -17076865 + AT_rich Low_complexity Low_complexity 1 50 0 4 667 48 57 0 28 chr3R 10833620 10833729 -17071324 + AT_rich Low_complexity Low_complexity 1 106 0 4 667 21 71 0 0 chr3R 10834390 10834432 -17070621 + AT_rich Low_complexity Low_complexity 1 42 0 4 667 34 0 0 0 chr3R 10834775 10834809 -17070244 + AT_rich Low_complexity Low_complexity 1 34 0 4 667 195 100 0 0 chr3R 10835309 10835339 -17069714 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 667 38 0 0 0 chr3R 10835959 10835997 -17069056 + AT_rich Low_complexity Low_complexity 1 38 0 4 667 23 78 0 0 chr3R 10836766 10836817 -17068236 + AT_rich Low_complexity Low_complexity 1 51 0 4 667 26 30 0 0 chr3R 10837193 10837226 -17067827 + AT_rich Low_complexity Low_complexity 1 33 0 4 667 23 68 0 0 chr3R 10839281 10839325 -17065728 + AT_rich Low_complexity Low_complexity 1 44 0 4 667 21 36 0 0 chr3R 10846854 10846882 -17058171 + AT_rich Low_complexity Low_complexity 1 28 0 4 667 216 0 0 0 chr3R 10847234 10847258 -17057795 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 667 23 33 0 0 chr3R 10848754 10848784 -17056269 + AT_rich Low_complexity Low_complexity 1 30 0 4 667 24 32 0 0 chr3R 10852138 10852169 -17052884 + AT_rich Low_complexity Low_complexity 1 31 0 4 667 207 0 0 0 chr3R 10852730 10852753 -17052300 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 667 225 65 0 0 chr3R 10856299 10856330 -17048723 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 667 26 0 0 0 chr3R 10856482 10856508 -17048545 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 45 45 0 0 chr3R 10858135 10858201 -17046852 + AT_rich Low_complexity Low_complexity 1 66 0 4 667 22 56 0 0 chr3R 10863864 10863900 -17041153 + AT_rich Low_complexity Low_complexity 1 36 0 4 667 24 32 0 0 chr3R 10865577 10865608 -17039445 + AT_rich Low_complexity Low_complexity 1 31 0 4 667 21 0 0 0 chr3R 10866284 10866305 -17038748 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 33 43 0 0 chr3R 10867120 10867167 -17037886 + AT_rich Low_complexity Low_complexity 1 47 0 4 667 32026 0 0 1 chr3R 10867204 10870905 -17034148 - DOC LINE Jockey -9 4716 1018 4 667 37 52 0 0 chr3R 10873684 10873742 -17031311 + AT_rich Low_complexity Low_complexity 1 58 0 4 667 34 72 0 0 chr3R 10877944 10878013 -17027040 + AT_rich Low_complexity Low_complexity 1 69 0 4 668 27 0 0 0 chr3R 10879992 10880019 -17025034 + AT_rich Low_complexity Low_complexity 1 27 0 4 668 25 31 0 0 chr3R 10880958 10880990 -17024063 + AT_rich Low_complexity Low_complexity 1 32 0 4 668 29 0 0 0 chr3R 10883517 10883546 -17021507 + AT_rich Low_complexity Low_complexity 1 29 0 4 668 23 68 0 0 chr3R 10883994 10884038 -17021015 + AT_rich Low_complexity Low_complexity 1 44 0 4 668 23 0 0 0 chr3R 10884088 10884111 -17020942 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 795 19 0 0 chr3R 10885058 10885156 -17019897 + BS LINE Jockey 5001 5098 -28 4 668 186 71 0 0 chr3R 10885156 10885184 -17019869 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4 668 25 0 0 0 chr3R 10889521 10889546 -17015507 + AT_rich Low_complexity Low_complexity 1 25 0 4 668 189 121 0 0 chr3R 10889929 10889962 -17015091 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 4 668 180 111 0 0 chr3R 10893417 10893444 -17011609 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 668 24 32 0 0 chr3R 10893947 10893978 -17011075 + AT_rich Low_complexity Low_complexity 1 31 0 4 668 21 36 0 0 chr3R 10894736 10894764 -17010289 + AT_rich Low_complexity Low_complexity 1 28 0 4 668 22 35 0 0 chr3R 10894812 10894841 -17010212 + AT_rich Low_complexity Low_complexity 1 29 0 4 668 227 234 0 38 chr3R 10897246 10897326 -17007727 - ROO_I LTR Pao -7528 728 652 4 668 21 0 0 0 chr3R 10898475 10898496 -17006557 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 24 0 0 0 chr3R 10899711 10899735 -17005318 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 1720 0 0 0 chr3R 10905582 10905768 -16999285 + POGON1 DNA Pogo 1 186 0 4 668 209 224 0 17 chr3R 10906830 10906889 -16998164 + (ATTG)n Simple_repeat Simple_repeat 2 59 0 4 668 21 57 0 0 chr3R 10909931 10909966 -16995087 + AT_rich Low_complexity Low_complexity 1 35 0 4 668 23 0 0 0 chr3R 10914377 10914400 -16990653 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 205 224 20 20 chr3R 10915327 10915377 -16989676 + (CATA)n Simple_repeat Simple_repeat 1 50 0 4 668 27 29 0 0 chr3R 10917552 10917586 -16987467 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 206 145 30 61 chr3R 10922296 10922362 -16982691 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 4 668 21 0 0 0 chr3R 10927932 10927953 -16977100 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 4458 4 0 0 chr3R 10928274 10928755 -16976298 - T412LTR LTR LTR 0 481 1 4 668 56111 1 1 3 chr3R 10928645 10934868 -16970185 - DM412 LTR Gypsy 0 6897 687 4 668 3909 11 0 11 chr3R 10934858 10935305 -16969748 - DM412 LTR Gypsy -6455 442 1 4 668 4458 4 0 0 chr3R 10934991 10935472 -16969581 - T412LTR LTR LTR 0 481 1 4 668 345 62 0 0 chr3R 10936629 10936677 -16968376 + (CAGT)n Simple_repeat Simple_repeat 3 50 0 4 668 183 80 0 0 chr3R 10937998 10938023 -16967030 + (CATTC)n Simple_repeat Simple_repeat 1 25 0 4 668 249 57 0 0 chr3R 10938138 10938173 -16966880 + (A)n Simple_repeat Simple_repeat 1 35 0 4 668 239 299 0 0 chr3R 10938197 10938264 -16966789 + (CAT)n Simple_repeat Simple_repeat 1 67 0 4 668 21 57 0 0 chr3R 10939554 10939589 -16965464 + AT_rich Low_complexity Low_complexity 1 35 0 4 668 201 254 0 0 chr3R 10941090 10941149 -16963904 + A-rich Low_complexity Low_complexity 1 59 0 4 668 204 40 0 0 chr3R 10942929 10942954 -16962099 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 4 668 216 0 0 0 chr3R 10945305 10945329 -16959724 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 668 189 154 0 0 chr3R 10948989 10949028 -16956025 + (TGAG)n Simple_repeat Simple_repeat 1 39 0 4 668 195 100 0 0 chr3R 10951171 10951201 -16953852 + (A)n Simple_repeat Simple_repeat 1 30 0 4 668 22 56 0 0 chr3R 10953544 10953580 -16951473 + AT_rich Low_complexity Low_complexity 1 36 0 4 668 24 32 0 0 chr3R 10953768 10953799 -16951254 + AT_rich Low_complexity Low_complexity 1 31 0 4 668 27 81 0 0 chr3R 10954663 10954725 -16950328 + AT_rich Low_complexity Low_complexity 1 62 0 4 668 213 298 0 34 chr3R 10955065 10955183 -16949870 + (TTG)n Simple_repeat Simple_repeat 2 115 0 4 668 258 216 26 39 chr3R 10956310 10956387 -16948666 + (TTTA)n Simple_repeat Simple_repeat 1 76 0 4 668 205 218 0 18 chr3R 10957125 10957181 -16947872 + T-rich Low_complexity Low_complexity 5 59 0 4 668 5486 0 0 4 chr3R 10957849 10958528 -16946525 - DOC6_DM LINE Jockey 0 4222 3547 4 668 19875 3 3 0 chr3R 10958508 10960827 -16944226 - DOC6_DM LINE Jockey -1898 2324 1 4 668 378 232 0 0 chr3R 10961870 10962034 -16943019 + (TTG)n Simple_repeat Simple_repeat 3 166 0 4 668 21 0 0 0 chr3R 10962271 10962292 -16942761 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 25 83 0 0 chr3R 10964691 10964751 -16940302 + AT_rich Low_complexity Low_complexity 1 60 0 4 668 474 186 122 0 chr3R 10965132 10965280 -16939773 - BURDOCK_I LTR Gypsy -1485 4375 4114 4 668 1480 64 0 5 chr3R 10965287 10965490 -16939563 + TC1-2_DM DNA Tc1 790 991 -653 4 668 448 79 40 0 chr3R 10965489 10965565 -16939488 + TC1-2_DM DNA Tc1 1566 1644 0 4 668 27 29 0 0 chr3R 10971295 10971329 -16933724 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 204 97 0 0 chr3R 10972552 10972583 -16932470 + (CAA)n Simple_repeat Simple_repeat 2 32 0 4 668 23 33 0 0 chr3R 10973682 10973712 -16931341 + AT_rich Low_complexity Low_complexity 1 30 0 4 668 23 0 0 0 chr3R 10973968 10973991 -16931062 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 27 29 0 0 chr3R 10974433 10974467 -16930586 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 25 31 0 0 chr3R 10975635 10975667 -16929386 + AT_rich Low_complexity Low_complexity 1 32 0 4 668 24 0 0 0 chr3R 10976561 10976585 -16928468 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 21 0 0 0 chr3R 10979638 10979659 -16925394 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 218 81 27 0 chr3R 10979924 10979961 -16925092 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 668 21 0 0 0 chr3R 10984878 10984899 -16920154 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 40582 1 0 0 chr3R 10988332 10993024 -16912029 - FW_DM LINE Jockey 0 4692 1 4 668 24 0 0 0 chr3R 10995591 10995615 -16909438 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 202 182 0 35 chr3R 10996358 10996415 -16908638 + T-rich Low_complexity Low_complexity 5 59 0 4 668 23 54 0 0 chr3R 10997283 10997320 -16907733 + AT_rich Low_complexity Low_complexity 1 37 0 4 668 27 29 0 0 chr3R 10997849 10997883 -16907170 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 204 40 0 0 chr3R 10998570 10998595 -16906458 + (TAG)n Simple_repeat Simple_repeat 2 26 0 4 668 26 64 0 0 chr3R 10998771 10998818 -16906235 + AT_rich Low_complexity Low_complexity 1 47 0 4 668 22 35 0 0 chr3R 11001201 11001230 -16903823 + AT_rich Low_complexity Low_complexity 1 29 0 4 668 189 154 0 0 chr3R 11001270 11001309 -16903744 + (TTG)n Simple_repeat Simple_repeat 1 39 0 4 668 23 0 0 0 chr3R 11001345 11001368 -16903685 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 26 0 0 0 chr3R 11001781 11001807 -16903246 + AT_rich Low_complexity Low_complexity 1 26 0 4 668 22 0 0 0 chr3R 11002728 11002750 -16902303 + AT_rich Low_complexity Low_complexity 1 22 0 4 668 195 100 0 0 chr3R 11003262 11003292 -16901761 + (CGAAA)n Simple_repeat Simple_repeat 1 30 0 4 668 320 64 0 21 chr3R 11003488 11003536 -16901517 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 4 668 34 0 0 0 chr3R 11003637 11003671 -16901382 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 24 0 0 0 chr3R 11004969 11004993 -16900060 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 211 260 0 25 chr3R 11005831 11005910 -16899143 + T-rich Low_complexity Low_complexity 5 81 0 4 668 230 193 0 17 chr3R 11007399 11007457 -16897596 + T-rich Low_complexity Low_complexity 4 60 0 4 668 28 29 0 0 chr3R 11007550 11007585 -16897468 + AT_rich Low_complexity Low_complexity 1 35 0 4 668 21 0 0 0 chr3R 11008008 11008029 -16897024 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 223 233 0 0 chr3R 11008496 11008539 -16896514 + (TTGGGG)n Simple_repeat Simple_repeat 3 45 0 4 668 26 0 0 0 chr3R 11008857 11008883 -16896170 + AT_rich Low_complexity Low_complexity 1 26 0 4 668 22 0 0 0 chr3R 11009534 11009556 -16895497 + AT_rich Low_complexity Low_complexity 1 22 0 4 668 25 83 0 0 chr3R 11009974 11010034 -16895019 + AT_rich Low_complexity Low_complexity 1 60 0 4 669 22 56 0 0 chr3R 11011116 11011152 -16893901 + AT_rich Low_complexity Low_complexity 1 36 0 4 669 32 0 0 0 chr3R 11013497 11013529 -16891524 + AT_rich Low_complexity Low_complexity 1 32 0 4 669 204 40 0 0 chr3R 11015574 11015599 -16889454 + (CAG)n Simple_repeat Simple_repeat 3 27 0 4 669 231 304 0 0 chr3R 11031854 11031923 -16873130 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 669 232 48 23 23 chr3R 11034238 11034281 -16870772 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 669 25 65 0 0 chr3R 11034679 11034725 -16870328 + AT_rich Low_complexity Low_complexity 1 46 0 4 669 21 0 0 0 chr3R 11044624 11044645 -16860408 + AT_rich Low_complexity Low_complexity 1 21 0 4 669 25 0 0 0 chr3R 11048077 11048102 -16856951 + AT_rich Low_complexity Low_complexity 1 25 0 4 669 28 0 0 0 chr3R 11048957 11048985 -16856068 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 227 56 56 0 chr3R 11050174 11050210 -16854843 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4 669 35 41 0 0 chr3R 11053175 11053224 -16851829 + AT_rich Low_complexity Low_complexity 1 49 0 4 669 39 0 0 0 chr3R 11066523 11066562 -16838491 + AT_rich Low_complexity Low_complexity 1 39 0 4 669 225 113 46 46 chr3R 11075460 11075525 -16829528 + (TTA)n Simple_repeat Simple_repeat 1 65 0 4 669 27 49 0 0 chr3R 11076373 11076414 -16828639 + AT_rich Low_complexity Low_complexity 1 41 0 4 669 24 53 0 0 chr3R 11077473 11077511 -16827542 + AT_rich Low_complexity Low_complexity 1 38 0 4 669 246 62 0 0 chr3R 11078718 11078750 -16826303 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 669 246 128 0 0 chr3R 11078958 11078997 -16826056 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 669 222 128 0 0 chr3R 11079110 11079149 -16825904 + (CAG)n Simple_repeat Simple_repeat 3 41 0 4 669 22 0 0 0 chr3R 11082789 11082811 -16822242 + AT_rich Low_complexity Low_complexity 1 22 0 4 669 21 36 0 0 chr3R 11085593 11085621 -16819432 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 269 302 0 0 chr3R 11090571 11090677 -16814376 + GA-rich Low_complexity Low_complexity 2 107 0 4 669 230 100 40 0 chr3R 11091042 11091092 -16813961 + (TTAA)n Simple_repeat Simple_repeat 4 55 0 4 669 29 28 0 0 chr3R 11094244 11094280 -16810773 + AT_rich Low_complexity Low_complexity 1 36 0 4 669 234 250 0 0 chr3R 11096324 11096380 -16808673 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 4 669 22 0 0 0 chr3R 11105281 11105303 -16799750 + AT_rich Low_complexity Low_complexity 1 22 0 4 669 21 36 0 0 chr3R 11106790 11106818 -16798235 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 186 43 0 0 chr3R 11108829 11108852 -16796201 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 669 23 0 0 0 chr3R 11111238 11111261 -16793792 + AT_rich Low_complexity Low_complexity 1 23 0 4 669 206 227 0 0 chr3R 11112486 11112530 -16792523 + CT-rich Low_complexity Low_complexity 1 44 0 4 669 337 261 7 22 chr3R 11113246 11113383 -16791670 + (CAA)n Simple_repeat Simple_repeat 3 137 0 4 669 205 255 20 0 chr3R 11117382 11117433 -16787620 + CT-rich Low_complexity Low_complexity 1 52 0 4 669 288 77 0 0 chr3R 11118076 11118115 -16786938 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 669 201 147 0 0 chr3R 11122093 11122127 -16782926 + (CAA)n Simple_repeat Simple_repeat 2 35 0 4 669 202 206 0 0 chr3R 11122466 11122500 -16782553 + (CAA)n Simple_repeat Simple_repeat 2 35 0 4 669 237 108 0 0 chr3R 11122897 11122934 -16782119 + (ATG)n Simple_repeat Simple_repeat 1 37 0 4 669 23 92 0 0 chr3R 11123329 11123394 -16781659 + AT_rich Low_complexity Low_complexity 1 65 0 4 669 219 150 0 0 chr3R 11126918 11126958 -16778095 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 4 669 21 36 0 0 chr3R 11127105 11127133 -16777920 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 270 56 0 0 chr3R 11128074 11128110 -16776943 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 669 200 59 0 29 chr3R 11130423 11130458 -16774595 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 4 669 204 106 64 0 chr3R 11130602 11130649 -16774404 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 4 669 236 298 0 0 chr3R 11131347 11131471 -16773582 + (CAG)n Simple_repeat Simple_repeat 2 125 0 4 669 217 233 0 0 chr3R 11132237 11132297 -16772756 + (CAG)n Simple_repeat Simple_repeat 2 61 0 4 669 362 287 0 0 chr3R 11132586 11132743 -16772310 + (CTG)n Simple_repeat Simple_repeat 1 157 0 4 669 253 186 353 0 chr3R 11134800 11134902 -16770151 + FB4_DM DNA Tc1 1 138 -3951 4 669 201 192 19 0 chr3R 11135224 11135276 -16769777 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 669 24 32 0 0 chr3R 11135331 11135362 -16769691 + AT_rich Low_complexity Low_complexity 1 31 0 4 669 228 150 50 0 chr3R 11137981 11138041 -16767012 + (TTATA)n Simple_repeat Simple_repeat 2 64 0 4 669 33 25 0 0 chr3R 11139510 11139550 -16765503 + AT_rich Low_complexity Low_complexity 1 40 0 4 669 213 65 0 0 chr3R 11139850 11139881 -16765172 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 669 21 57 0 0 chr3R 11140503 11140538 -16764515 + AT_rich Low_complexity Low_complexity 1 35 0 4 669 21 0 0 0 chr3R 11140605 11140626 -16764427 + AT_rich Low_complexity Low_complexity 1 21 0 4 669 22 80 0 0 chr3R 11140873 11140923 -16764130 + AT_rich Low_complexity Low_complexity 1 50 0 4 670 180 238 0 0 chr3R 11142858 11142921 -16762132 + (CAG)n Simple_repeat Simple_repeat 3 65 0 4 670 186 133 0 0 chr3R 11142952 11142982 -16762071 + (TGG)n Simple_repeat Simple_repeat 2 31 0 4 670 28 29 0 0 chr3R 11143955 11143990 -16761063 + AT_rich Low_complexity Low_complexity 1 35 0 4 670 334 264 0 26 chr3R 11148722 11148835 -16756218 + GA-rich Low_complexity Low_complexity 5 114 0 4 670 219 69 0 0 chr3R 11149709 11149738 -16755315 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 670 22 35 0 0 chr3R 11150352 11150381 -16754672 + AT_rich Low_complexity Low_complexity 1 29 0 4 670 22 35 0 0 chr3R 11150489 11150518 -16754535 + AT_rich Low_complexity Low_complexity 1 29 0 4 670 200 195 0 0 chr3R 11157830 11157871 -16747182 + CT-rich Low_complexity Low_complexity 3 43 0 4 670 224 316 6 62 chr3R 11157984 11158146 -16746907 + (CAT)n Simple_repeat Simple_repeat 3 155 0 4 670 21 36 0 0 chr3R 11182787 11182815 -16722238 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 21 57 0 0 chr3R 11187478 11187513 -16717540 + AT_rich Low_complexity Low_complexity 1 35 0 4 670 21 0 0 0 chr3R 11188526 11188547 -16716506 + AT_rich Low_complexity Low_complexity 1 21 0 4 670 23 68 0 0 chr3R 11192721 11192765 -16712288 + AT_rich Low_complexity Low_complexity 1 44 0 4 670 23 0 0 0 chr3R 11194576 11194599 -16710454 + AT_rich Low_complexity Low_complexity 1 23 0 4 670 183 100 0 0 chr3R 11197959 11197989 -16707064 + (CTCTG)n Simple_repeat Simple_repeat 3 32 0 4 670 25 0 0 0 chr3R 11199832 11199857 -16705196 + AT_rich Low_complexity Low_complexity 1 25 0 4 670 246 278 0 27 chr3R 11201117 11201191 -16703862 + (CATA)n Simple_repeat Simple_repeat 1 72 0 4 670 203 200 22 0 chr3R 11201328 11201373 -16703680 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 670 210 37 0 0 chr3R 11201513 11201540 -16703513 + (CAG)n Simple_repeat Simple_repeat 1 27 0 4 670 250 299 11 22 chr3R 11201646 11201735 -16703318 + (CATATA)n Simple_repeat Simple_repeat 4 91 0 4 670 22 0 0 0 chr3R 11203779 11203801 -16701252 + AT_rich Low_complexity Low_complexity 1 22 0 4 670 238 196 0 0 chr3R 11204716 11204762 -16700291 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 670 243 103 0 0 chr3R 11205888 11205927 -16699126 + (CAT)n Simple_repeat Simple_repeat 1 39 0 4 670 21 36 0 0 chr3R 11206424 11206452 -16698601 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 183 156 0 0 chr3R 11206630 11206662 -16698391 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 670 180 77 0 0 chr3R 11209040 11209066 -16695987 + (CGG)n Simple_repeat Simple_repeat 2 27 0 4 670 237 151 0 70 chr3R 11210736 11210793 -16694260 + (CGAAT)n Simple_repeat Simple_repeat 1 53 0 4 670 24 32 0 0 chr3R 11211708 11211739 -16693314 + AT_rich Low_complexity Low_complexity 1 31 0 4 670 202 192 39 0 chr3R 11212382 11212434 -16692619 + (TCTCTG)n Simple_repeat Simple_repeat 1 54 0 4 670 207 0 0 0 chr3R 11215111 11215134 -16689919 + (CTA)n Simple_repeat Simple_repeat 2 24 0 4 670 210 91 0 0 chr3R 11217234 11217267 -16687786 + (CAG)n Simple_repeat Simple_repeat 1 33 0 4 670 43 20 0 0 chr3R 11218851 11218901 -16686152 + AT_rich Low_complexity Low_complexity 1 50 0 4 670 26 0 0 0 chr3R 11219918 11219944 -16685109 + AT_rich Low_complexity Low_complexity 1 26 0 4 670 23 54 0 0 chr3R 11220960 11220997 -16684056 + AT_rich Low_complexity Low_complexity 1 37 0 4 670 21 57 0 0 chr3R 11221110 11221145 -16683908 + AT_rich Low_complexity Low_complexity 1 35 0 4 670 180 0 0 0 chr3R 11222631 11222651 -16682402 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 670 200 135 0 26 chr3R 11222776 11222814 -16682239 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 670 213 65 0 0 chr3R 11223561 11223592 -16681461 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 670 180 0 0 0 chr3R 11224710 11224730 -16680323 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 670 255 155 0 110 chr3R 11224863 11224972 -16680081 + ROO_I LTR Pao 640 736 -7520 4 670 180 0 0 0 chr3R 11225439 11225459 -16679594 + (CAG)n Simple_repeat Simple_repeat 3 22 0 4 670 188 167 0 20 chr3R 11225663 11225712 -16679341 + (TTA)n Simple_repeat Simple_repeat 1 48 0 4 670 219 36 0 0 chr3R 11225827 11225855 -16679198 + (ATATG)n Simple_repeat Simple_repeat 5 32 0 4 670 30 27 0 0 chr3R 11225877 11225914 -16679139 + AT_rich Low_complexity Low_complexity 1 37 0 4 670 231 227 12 62 chr3R 11226111 11226191 -16678862 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 670 24 32 0 0 chr3R 11226396 11226427 -16678626 + AT_rich Low_complexity Low_complexity 1 31 0 4 670 214 242 0 16 chr3R 11227573 11227636 -16677417 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 670 202 306 0 0 chr3R 11227940 11228012 -16677041 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 670 23 68 0 0 chr3R 11228276 11228320 -16676733 + AT_rich Low_complexity Low_complexity 1 44 0 4 670 189 196 0 0 chr3R 11235422 11235473 -16669580 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 670 456 128 0 0 chr3R 11239531 11239609 -16665444 + (CAG)n Simple_repeat Simple_repeat 1 78 0 4 670 265 144 0 168 chr3R 11239734 11239859 -16665194 + ROO_I LTR Pao 640 743 -7513 4 670 275 319 0 0 chr3R 11239930 11240090 -16664963 + (CAG)n Simple_repeat Simple_repeat 1 160 0 4 670 204 143 0 0 chr3R 11242232 11242274 -16662779 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 670 24 53 0 0 chr3R 11242942 11242980 -16662073 + AT_rich Low_complexity Low_complexity 1 38 0 4 670 205 80 38 57 chr3R 11242980 11243033 -16662020 + A-rich Low_complexity Low_complexity 4 55 0 4 670 234 45 22 43 chr3R 11243577 11243623 -16661430 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 670 242 271 0 0 chr3R 11243750 11243820 -16661233 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 670 213 220 0 0 chr3R 11243944 11243994 -16661059 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 670 293 82 20 0 chr3R 11246470 11246519 -16658534 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 670 249 33 0 0 chr3R 11247593 11247623 -16657430 + (CGATA)n Simple_repeat Simple_repeat 2 31 0 4 670 198 143 0 0 chr3R 11248051 11248086 -16656967 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 670 225 196 0 0 chr3R 11248520 11248576 -16656477 + (TTG)n Simple_repeat Simple_repeat 1 56 0 4 670 258 116 0 0 chr3R 11248938 11248981 -16656072 + (TTG)n Simple_repeat Simple_repeat 1 43 0 4 670 198 160 0 0 chr3R 11249839 11249889 -16655164 + (CTG)n Simple_repeat Simple_repeat 1 50 0 4 670 342 231 0 28 chr3R 11249983 11250090 -16654963 - ROO_I LTR Pao -7512 744 641 4 670 398 86 0 41 chr3R 11250185 11250258 -16654795 + (CTG)n Simple_repeat Simple_repeat 1 70 0 4 670 180 111 0 0 chr3R 11251723 11251750 -16653303 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 670 31 0 0 0 chr3R 11252412 11252443 -16652610 + AT_rich Low_complexity Low_complexity 1 31 0 4 670 22 35 0 0 chr3R 11252502 11252531 -16652522 + AT_rich Low_complexity Low_complexity 1 29 0 4 670 235 204 0 36 chr3R 11253004 11253060 -16651993 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 4 670 260 225 14 0 chr3R 11253151 11253222 -16651831 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 670 219 36 0 0 chr3R 11255373 11255401 -16649652 + (TGGA)n Simple_repeat Simple_repeat 1 28 0 4 670 309 256 0 0 chr3R 11255583 11255665 -16649388 + (CAT)n Simple_repeat Simple_repeat 2 83 0 4 670 204 40 0 0 chr3R 11258945 11258970 -16646083 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 670 228 224 0 0 chr3R 11259295 11259344 -16645709 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 4 670 26 0 0 0 chr3R 11260998 11261024 -16644029 + AT_rich Low_complexity Low_complexity 1 26 0 4 670 21 36 0 0 chr3R 11262301 11262329 -16642724 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 190 136 22 22 chr3R 11262784 11262829 -16642224 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 670 181 111 21 43 chr3R 11263127 11263174 -16641879 + (CATA)n Simple_repeat Simple_repeat 1 46 0 4 670 288 253 0 25 chr3R 11263370 11263451 -16641602 + (TGG)n Simple_repeat Simple_repeat 3 81 0 4 670 21 36 0 0 chr3R 11264123 11264151 -16640902 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 23 33 0 0 chr3R 11267874 11267904 -16637149 + AT_rich Low_complexity Low_complexity 1 30 0 4 670 25 0 0 0 chr3R 11268436 11268461 -16636592 + AT_rich Low_complexity Low_complexity 1 25 0 4 670 21 0 0 0 chr3R 11268692 11268713 -16636340 + AT_rich Low_complexity Low_complexity 1 21 0 4 670 24 32 0 0 chr3R 11271786 11271817 -16633236 + AT_rich Low_complexity Low_complexity 1 31 0 4 671 207 184 26 0 chr3R 11276030 11276068 -16628985 + (CAGC)n Simple_repeat Simple_repeat 3 41 0 4 671 207 139 0 0 chr3R 11279430 11279466 -16625587 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 671 339 78 0 0 chr3R 11283275 11283326 -16621727 + (CAGT)n Simple_repeat Simple_repeat 4 54 0 4 671 256 232 0 24 chr3R 11285244 11285328 -16619725 + T-rich Low_complexity Low_complexity 3 84 0 4 671 186 43 0 0 chr3R 11285757 11285780 -16619273 + (A)n Simple_repeat Simple_repeat 1 23 0 4 671 23 33 0 0 chr3R 11287337 11287367 -16617686 + AT_rich Low_complexity Low_complexity 1 30 0 4 671 288 70 0 0 chr3R 11289333 11289376 -16615677 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 671 192 40 0 0 chr3R 11289982 11290007 -16615046 + (T)n Simple_repeat Simple_repeat 1 25 0 4 671 21 57 0 0 chr3R 11290484 11290519 -16614534 + AT_rich Low_complexity Low_complexity 1 35 0 4 671 21 36 0 0 chr3R 11291860 11291888 -16613165 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 228 86 0 0 chr3R 11292239 11292274 -16612779 + (CGAT)n Simple_repeat Simple_repeat 2 36 0 4 671 228 35 0 0 chr3R 11292445 11292474 -16612579 + (T)n Simple_repeat Simple_repeat 1 29 0 4 671 235 246 0 0 chr3R 11294155 11294212 -16610841 + T-rich Low_complexity Low_complexity 1 57 0 4 671 270 243 0 0 chr3R 11298838 11298912 -16606141 + A-rich Low_complexity Low_complexity 1 74 0 4 671 213 196 0 0 chr3R 11299371 11299417 -16605636 + (CAGC)n Simple_repeat Simple_repeat 2 47 0 4 671 255 61 0 0 chr3R 11300258 11300291 -16604762 + (AAATG)n Simple_repeat Simple_repeat 3 35 0 4 671 216 158 0 0 chr3R 11302051 11302089 -16602964 + (CATA)n Simple_repeat Simple_repeat 4 41 0 4 671 32 0 0 0 chr3R 11302418 11302450 -16602603 + AT_rich Low_complexity Low_complexity 1 32 0 4 671 204 150 0 24 chr3R 11303798 11303839 -16601214 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 4 671 216 0 0 0 chr3R 11304995 11305019 -16600034 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 671 23 78 0 0 chr3R 11306309 11306360 -16598693 + AT_rich Low_complexity Low_complexity 1 51 0 4 671 387 157 0 0 chr3R 11306690 11306760 -16598293 + (ACTG)n Simple_repeat Simple_repeat 1 70 0 4 671 24 53 0 0 chr3R 11310364 11310402 -16594651 + AT_rich Low_complexity Low_complexity 1 38 0 4 671 21 71 0 0 chr3R 11319215 11319257 -16585796 + AT_rich Low_complexity Low_complexity 1 42 0 4 671 213 39 0 0 chr3R 11324138 11324164 -16580889 + (T)n Simple_repeat Simple_repeat 1 26 0 4 671 33 25 0 0 chr3R 11333091 11333131 -16571922 + AT_rich Low_complexity Low_complexity 1 40 0 4 671 258 143 0 0 chr3R 11337368 11337417 -16567636 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 671 204 111 0 0 chr3R 11341481 11341517 -16563536 + (ATG)n Simple_repeat Simple_repeat 1 36 0 4 671 240 149 0 0 chr3R 11343182 11343229 -16561824 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 671 291 54 0 0 chr3R 11351240 11351277 -16553776 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 671 23 0 0 0 chr3R 11352799 11352822 -16552231 + AT_rich Low_complexity Low_complexity 1 23 0 4 671 21 36 0 0 chr3R 11355802 11355830 -16549223 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 203 158 0 0 chr3R 11356036 11356074 -16548979 + (CTG)n Simple_repeat Simple_repeat 2 39 0 4 671 21 36 0 0 chr3R 11360796 11360824 -16544229 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 32 81 0 0 chr3R 11366610 11366684 -16538369 + AT_rich Low_complexity Low_complexity 1 74 0 4 671 282 106 0 0 chr3R 11381664 11381711 -16523342 + (ATTCG)n Simple_repeat Simple_repeat 3 49 0 4 671 195 42 0 0 chr3R 11386604 11386628 -16518425 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 671 249 128 0 0 chr3R 11388494 11388541 -16516512 + (CTG)n Simple_repeat Simple_repeat 3 49 0 4 671 250 224 0 0 chr3R 11391596 11391645 -16513408 + (CAG)n Simple_repeat Simple_repeat 2 50 0 4 671 225 281 0 50 chr3R 11392649 11392750 -16512303 + (CAA)n Simple_repeat Simple_repeat 2 97 0 4 671 21 0 0 0 chr3R 11392898 11392919 -16512134 + AT_rich Low_complexity Low_complexity 1 21 0 4 671 188 182 23 0 chr3R 11393950 11393994 -16511059 + (CGGAA)n Simple_repeat Simple_repeat 2 46 0 4 671 183 80 0 0 chr3R 11394853 11394878 -16510175 + (ATG)n Simple_repeat Simple_repeat 1 25 0 4 671 273 57 0 0 chr3R 11395539 11395574 -16509479 + (TGAG)n Simple_repeat Simple_repeat 3 37 0 4 671 180 0 0 0 chr3R 11395663 11395683 -16509370 + (TATG)n Simple_repeat Simple_repeat 1 20 0 4 671 189 107 0 0 chr3R 11396436 11396464 -16508589 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 672 22 0 0 0 chr3R 11404715 11404737 -16500316 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 24 0 0 0 chr3R 11409691 11409715 -16495338 + AT_rich Low_complexity Low_complexity 1 24 0 4 672 191 105 0 50 chr3R 11414728 11414768 -16490285 + (TTTCG)n Simple_repeat Simple_repeat 3 40 0 4 672 23 33 0 0 chr3R 11421053 11421083 -16483970 + AT_rich Low_complexity Low_complexity 1 30 0 4 672 24 32 0 0 chr3R 11422369 11422400 -16482653 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 24 53 0 0 chr3R 11424266 11424304 -16480749 + AT_rich Low_complexity Low_complexity 1 38 0 4 672 207 0 0 0 chr3R 11426712 11426735 -16478318 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 672 4378 8 0 2 chr3R 11426940 11427422 -16477631 - T412LTR LTR LTR 0 481 1 4 672 62131 1 0 4 chr3R 11427312 11434238 -16470815 - DM412 LTR Gypsy 0 6897 1 4 672 4378 8 0 2 chr3R 11433923 11434405 -16470648 - T412LTR LTR LTR 0 481 1 4 672 22 0 0 0 chr3R 11436373 11436395 -16468658 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 24 32 0 0 chr3R 11439129 11439160 -16465893 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 26 30 0 0 chr3R 11442339 11442372 -16462681 + AT_rich Low_complexity Low_complexity 1 33 0 4 672 31 0 0 0 chr3R 11443030 11443061 -16461992 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 3427 5 45 0 chr3R 11444507 11444675 -16460378 + BLOOD_LTR LTR Gypsy 1 168 -231 4 672 180 0 0 0 chr3R 11444675 11444695 -16460358 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 672 3427 5 45 0 chr3R 11444695 11444908 -16460145 + BLOOD_LTR LTR Gypsy 169 397 -2 4 672 60230 1 0 0 chr3R 11444908 11451523 -16453530 + BLOOD_I LTR Gypsy 1 6613 0 4 672 3427 5 45 0 chr3R 11451523 11451691 -16453362 + BLOOD_LTR LTR Gypsy 1 168 -231 4 672 180 0 0 0 chr3R 11451691 11451711 -16453342 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 672 3427 5 45 0 chr3R 11451711 11451924 -16453129 + BLOOD_LTR LTR Gypsy 169 397 -2 4 672 191 36 36 0 chr3R 11457115 11457143 -16447910 + (CAGAC)n Simple_repeat Simple_repeat 5 33 0 4 672 237 83 0 0 chr3R 11460367 11460403 -16444650 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 4 672 25 31 0 0 chr3R 11462246 11462278 -16442775 + AT_rich Low_complexity Low_complexity 1 32 0 4 672 22 0 0 0 chr3R 11463960 11463982 -16441071 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 249 119 0 0 chr3R 11472062 11472104 -16432949 + (CAT)n Simple_repeat Simple_repeat 1 42 0 4 672 22 56 0 0 chr3R 11474336 11474372 -16430681 + AT_rich Low_complexity Low_complexity 1 36 0 4 672 27 29 0 0 chr3R 11475077 11475111 -16429942 + AT_rich Low_complexity Low_complexity 1 34 0 4 672 183 80 0 0 chr3R 11476029 11476054 -16428999 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 4 672 21 0 0 0 chr3R 11476143 11476164 -16428889 + AT_rich Low_complexity Low_complexity 1 21 0 4 672 40 0 0 0 chr3R 11478563 11478603 -16426450 + AT_rich Low_complexity Low_complexity 1 40 0 4 672 204 97 0 0 chr3R 11483525 11483556 -16421497 + (CAACT)n Simple_repeat Simple_repeat 1 31 0 4 672 33 73 0 0 chr3R 11490149 11490217 -16414836 + AT_rich Low_complexity Low_complexity 1 68 0 4 672 206 118 0 0 chr3R 11490624 11490658 -16414395 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 672 201 83 0 53 chr3R 11495831 11495869 -16409184 + (GGATG)n Simple_repeat Simple_repeat 2 37 0 4 672 198 0 0 0 chr3R 11496226 11496248 -16408805 + (CAATT)n Simple_repeat Simple_repeat 4 25 0 4 672 228 135 0 0 chr3R 11500561 11500598 -16404455 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 672 225 0 0 0 chr3R 11501744 11501769 -16403284 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 672 21 0 0 0 chr3R 11501852 11501873 -16403180 + AT_rich Low_complexity Low_complexity 1 21 0 4 672 24 32 0 0 chr3R 11507290 11507321 -16397732 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 223 205 0 0 chr3R 11516786 11516825 -16388228 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 672 22 35 0 0 chr3R 11525266 11525295 -16379758 + AT_rich Low_complexity Low_complexity 1 29 0 4 672 23 0 0 0 chr3R 11531121 11531144 -16373909 + AT_rich Low_complexity Low_complexity 1 23 0 4 672 25 0 0 0 chr3R 11531864 11531889 -16373164 + AT_rich Low_complexity Low_complexity 1 25 0 4 672 28 0 0 0 chr3R 11532258 11532286 -16372767 + AT_rich Low_complexity Low_complexity 1 28 0 4 672 198 128 0 0 chr3R 11533642 11533681 -16371372 + (CAG)n Simple_repeat Simple_repeat 2 40 0 4 673 22 70 0 0 chr3R 11535271 11535314 -16369739 + AT_rich Low_complexity Low_complexity 1 43 0 4 673 21 71 0 0 chr3R 11535444 11535486 -16369567 + AT_rich Low_complexity Low_complexity 1 42 0 4 673 21 0 0 0 chr3R 11536475 11536496 -16368557 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 216 111 0 0 chr3R 11537040 11537076 -16367977 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 673 22 35 0 0 chr3R 11541589 11541618 -16363435 + AT_rich Low_complexity Low_complexity 1 29 0 4 673 40 21 0 0 chr3R 11541778 11541825 -16363228 + AT_rich Low_complexity Low_complexity 1 47 0 4 673 22 0 0 0 chr3R 11543058 11543080 -16361973 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 21 0 0 0 chr3R 11544077 11544098 -16360955 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 21 36 0 0 chr3R 11544872 11544900 -16360153 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 23 0 0 0 chr3R 11544991 11545014 -16360039 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 183 42 0 0 chr3R 11545472 11545496 -16359557 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 673 192 77 0 0 chr3R 11545545 11545571 -16359482 + (ATG)n Simple_repeat Simple_repeat 1 26 0 4 673 25 0 0 0 chr3R 11545637 11545662 -16359391 + AT_rich Low_complexity Low_complexity 1 25 0 4 673 246 62 0 0 chr3R 11546230 11546262 -16358791 + (ATG)n Simple_repeat Simple_repeat 3 34 0 4 673 21 0 0 0 chr3R 11548541 11548562 -16356491 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 21 0 0 0 chr3R 11550331 11550352 -16354701 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 31 0 0 0 chr3R 11552362 11552393 -16352660 + AT_rich Low_complexity Low_complexity 1 31 0 4 673 23 0 0 0 chr3R 11552489 11552512 -16352541 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 25 31 0 0 chr3R 11554144 11554176 -16350877 + AT_rich Low_complexity Low_complexity 1 32 0 4 673 27 0 0 0 chr3R 11554624 11554651 -16350402 + AT_rich Low_complexity Low_complexity 1 27 0 4 673 25 31 0 0 chr3R 11555045 11555077 -16349976 + AT_rich Low_complexity Low_complexity 1 32 0 4 673 252 59 0 0 chr3R 11556352 11556386 -16348667 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 673 22 0 0 0 chr3R 11557480 11557502 -16347551 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 22 0 0 0 chr3R 11559081 11559103 -16345950 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 43267 1 0 0 chr3R 11560980 11565672 -16339381 - FW_DM LINE Jockey 0 4692 1 4 673 23 0 0 0 chr3R 11568139 11568162 -16336891 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 21 71 0 0 chr3R 11568859 11568901 -16336152 + AT_rich Low_complexity Low_complexity 1 42 0 4 673 189 0 0 0 chr3R 11569899 11569920 -16335133 + (CATA)n Simple_repeat Simple_repeat 3 23 0 4 673 37 23 0 0 chr3R 11570804 11570848 -16334205 + AT_rich Low_complexity Low_complexity 1 44 0 4 673 229 221 88 0 chr3R 11571518 11571586 -16333467 + R2B_DM LINE R2 1911 1984 -1544 4 673 28 48 0 0 chr3R 11572974 11573016 -16332037 + AT_rich Low_complexity Low_complexity 1 42 0 4 673 216 0 0 0 chr3R 11575587 11575611 -16329442 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 673 23 0 0 0 chr3R 11580091 11580114 -16324939 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 210 150 0 0 chr3R 11581352 11581392 -16323661 + (TTGG)n Simple_repeat Simple_repeat 3 42 0 4 673 223 250 0 29 chr3R 11583583 11583653 -16321400 + A-rich Low_complexity Low_complexity 5 72 0 4 673 198 0 0 0 chr3R 11586028 11586050 -16319003 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 673 207 0 0 0 chr3R 11586248 11586271 -16318782 + (GAATG)n Simple_repeat Simple_repeat 3 25 0 4 673 30 0 0 0 chr3R 11587835 11587865 -16317188 + AT_rich Low_complexity Low_complexity 1 30 0 4 673 244 167 0 18 chr3R 11588011 11588066 -16316987 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 4 673 21 0 0 0 chr3R 11589211 11589232 -16315821 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 192 40 0 0 chr3R 11594035 11594060 -16310993 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 4 673 39 68 0 0 chr3R 11594461 11594535 -16310518 + AT_rich Low_complexity Low_complexity 1 74 0 4 673 195 42 0 0 chr3R 11594866 11594890 -16310163 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 673 30 27 0 0 chr3R 11596224 11596261 -16308792 + AT_rich Low_complexity Low_complexity 1 37 0 4 673 627 192 97 46 chr3R 11596811 11596986 -16308067 + DNAREP1_DM LINE Penelope 390 573 -21 4 673 237 108 0 0 chr3R 11598954 11598991 -16306062 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 673 21 36 0 0 chr3R 11599803 11599831 -16305222 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 24 0 0 0 chr3R 11603439 11603463 -16301590 + AT_rich Low_complexity Low_complexity 1 24 0 4 673 28 0 0 0 chr3R 11604228 11604256 -16300797 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 21 57 0 0 chr3R 11605208 11605243 -16299810 + AT_rich Low_complexity Low_complexity 1 35 0 4 673 203 171 0 0 chr3R 11609861 11609902 -16295151 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 673 207 338 0 0 chr3R 11610490 11610570 -16294483 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 673 21 57 0 0 chr3R 11612327 11612362 -16292691 + AT_rich Low_complexity Low_complexity 1 35 0 4 673 30 27 0 0 chr3R 11617330 11617367 -16287686 + AT_rich Low_complexity Low_complexity 1 37 0 4 673 21 36 0 0 chr3R 11618195 11618223 -16286830 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 27 0 0 0 chr3R 11619230 11619257 -16285796 + AT_rich Low_complexity Low_complexity 1 27 0 4 673 210 128 0 0 chr3R 11625305 11625344 -16279709 + (TAA)n Simple_repeat Simple_repeat 2 40 0 4 673 195 69 0 0 chr3R 11627641 11627670 -16277383 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 673 180 0 0 0 chr3R 11631891 11631911 -16273142 + (ATG)n Simple_repeat Simple_repeat 3 22 0 4 673 21 0 0 0 chr3R 11632373 11632394 -16272659 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 1400 46 22 15 chr3R 11635852 11636125 -16268928 + (TTATA)n Simple_repeat Simple_repeat 1 275 0 4 673 21 0 0 0 chr3R 11640859 11640880 -16264173 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 24 32 0 0 chr3R 11642834 11642865 -16262188 + AT_rich Low_complexity Low_complexity 1 31 0 4 673 23 33 0 0 chr3R 11651142 11651172 -16253881 + AT_rich Low_complexity Low_complexity 1 30 0 4 673 22 0 0 0 chr3R 11659089 11659111 -16245942 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 23 0 0 0 chr3R 11660248 11660271 -16244782 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 26 0 0 0 chr3R 11660452 11660478 -16244575 + AT_rich Low_complexity Low_complexity 1 26 0 4 673 24 0 0 0 chr3R 11661707 11661731 -16243322 + AT_rich Low_complexity Low_complexity 1 24 0 4 673 25 102 0 0 chr3R 11662906 11662994 -16242059 + AT_rich Low_complexity Low_complexity 1 88 0 4 673 28 0 0 0 chr3R 11663830 11663858 -16241195 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 24 32 0 0 chr3R 11674403 11674434 -16230619 + AT_rich Low_complexity Low_complexity 1 31 0 4 674 21 57 0 0 chr3R 11674796 11674831 -16230222 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 271 141 15 15 chr3R 11678794 11678859 -16226194 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 674 205 29 59 0 chr3R 11679142 11679176 -16225877 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 674 21 0 0 0 chr3R 11687678 11687699 -16217354 + AT_rich Low_complexity Low_complexity 1 21 0 4 674 26 0 0 0 chr3R 11687709 11687735 -16217318 + AT_rich Low_complexity Low_complexity 1 26 0 4 674 27 0 0 0 chr3R 11688661 11688688 -16216365 + AT_rich Low_complexity Low_complexity 1 27 0 4 674 23 0 0 0 chr3R 11696864 11696887 -16208166 + AT_rich Low_complexity Low_complexity 1 23 0 4 674 480 183 38 19 chr3R 11697480 11697586 -16207467 + DNAREP1_DM LINE Penelope 3 110 -484 4 674 522 84 0 0 chr3R 11697760 11697831 -16207222 + DNAREP1_DM LINE Penelope 524 594 0 4 674 21 36 0 0 chr3R 11698205 11698233 -16206820 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 240 226 0 31 chr3R 11701563 11701627 -16203426 + (CGG)n Simple_repeat Simple_repeat 1 62 0 4 674 24 32 0 0 chr3R 11701654 11701685 -16203368 + AT_rich Low_complexity Low_complexity 1 31 0 4 674 35 0 0 0 chr3R 11706811 11706846 -16198207 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 27 29 0 0 chr3R 11711195 11711229 -16193824 + AT_rich Low_complexity Low_complexity 1 34 0 4 674 23 0 0 0 chr3R 11714684 11714707 -16190346 + AT_rich Low_complexity Low_complexity 1 23 0 4 674 24 0 0 0 chr3R 11715391 11715415 -16189638 + AT_rich Low_complexity Low_complexity 1 24 0 4 674 204 67 0 0 chr3R 11725821 11725851 -16179202 + (CAGG)n Simple_repeat Simple_repeat 3 32 0 4 674 22 56 0 0 chr3R 11726245 11726281 -16178772 + AT_rich Low_complexity Low_complexity 1 36 0 4 674 21 36 0 0 chr3R 11731566 11731594 -16173459 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 27 29 0 0 chr3R 11732532 11732566 -16172487 + AT_rich Low_complexity Low_complexity 1 34 0 4 674 21 36 0 0 chr3R 11733758 11733786 -16171267 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 27 29 0 0 chr3R 11734724 11734758 -16170295 + AT_rich Low_complexity Low_complexity 1 34 0 4 674 250 268 0 0 chr3R 11736617 11736688 -16168365 + (CTG)n Simple_repeat Simple_repeat 1 71 0 4 674 203 290 0 0 chr3R 11737051 11737120 -16167933 + (CTG)n Simple_repeat Simple_repeat 2 70 0 4 674 220 141 0 45 chr3R 11737336 11737403 -16167650 + (CTG)n Simple_repeat Simple_repeat 3 66 0 4 674 206 218 0 0 chr3R 11738440 11738495 -16166558 + CT-rich Low_complexity Low_complexity 2 56 0 4 674 205 204 19 0 chr3R 11738993 11739047 -16166006 + (TGG)n Simple_repeat Simple_repeat 2 56 0 4 674 272 165 9 134 chr3R 11739123 11739235 -16165818 - ROO_I LTR Pao -7516 740 643 4 674 218 259 0 0 chr3R 11739315 11739369 -16165684 + (CTG)n Simple_repeat Simple_repeat 2 55 0 4 674 24 53 0 0 chr3R 11743034 11743072 -16161981 + AT_rich Low_complexity Low_complexity 1 38 0 4 674 191 218 18 0 chr3R 11744893 11744948 -16160105 + (CAA)n Simple_repeat Simple_repeat 2 57 0 4 674 189 0 0 0 chr3R 11746733 11746754 -16158299 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 674 21 36 0 0 chr3R 11748551 11748579 -16156474 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 21 0 0 0 chr3R 11748813 11748834 -16156219 + AT_rich Low_complexity Low_complexity 1 21 0 4 674 183 129 0 0 chr3R 11749448 11749479 -16155574 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 674 207 0 0 0 chr3R 11750355 11750378 -16154675 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 674 244 237 26 26 chr3R 11752611 11752689 -16152364 + ROO_I LTR Pao 676 753 -7503 4 674 21 36 0 0 chr3R 11755532 11755560 -16149493 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 21 57 0 0 chr3R 11759481 11759516 -16145537 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 195 100 0 0 chr3R 11763191 11763221 -16141832 + (TCG)n Simple_repeat Simple_repeat 2 31 0 4 674 22 0 0 0 chr3R 11764575 11764597 -16140456 + AT_rich Low_complexity Low_complexity 1 22 0 4 674 183 80 0 0 chr3R 11764779 11764804 -16140249 + (AACTG)n Simple_repeat Simple_repeat 4 28 0 4 674 22 0 0 0 chr3R 11765915 11765937 -16139116 + AT_rich Low_complexity Low_complexity 1 22 0 4 674 214 191 0 0 chr3R 11768638 11768680 -16136373 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 4 674 213 94 0 0 chr3R 11769500 11769532 -16135521 + (CTG)n Simple_repeat Simple_repeat 1 32 0 4 674 28 48 0 0 chr3R 11776276 11776318 -16128735 + AT_rich Low_complexity Low_complexity 1 42 0 4 674 204 40 0 0 chr3R 11780197 11780222 -16124831 + (TTTAG)n Simple_repeat Simple_repeat 4 28 0 4 674 240 35 0 0 chr3R 11781056 11781085 -16123968 + (TCTA)n Simple_repeat Simple_repeat 4 32 0 4 674 21 57 0 0 chr3R 11782698 11782733 -16122320 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 22 35 0 0 chr3R 11782786 11782815 -16122238 + AT_rich Low_complexity Low_complexity 1 29 0 4 674 204 236 26 79 chr3R 11783327 11783479 -16121574 + A-rich Low_complexity Low_complexity 2 145 0 4 674 25 0 0 0 chr3R 11784318 11784343 -16120710 + AT_rich Low_complexity Low_complexity 1 25 0 4 674 227 146 18 0 chr3R 11786065 11786120 -16118933 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 674 23 54 0 0 chr3R 11786151 11786188 -16118865 + AT_rich Low_complexity Low_complexity 1 37 0 4 674 21 0 0 0 chr3R 11787085 11787106 -16117947 + AT_rich Low_complexity Low_complexity 1 21 0 4 674 30 27 0 0 chr3R 11787168 11787205 -16117848 + AT_rich Low_complexity Low_complexity 1 37 0 4 674 23 54 0 0 chr3R 11793757 11793794 -16111259 + AT_rich Low_complexity Low_complexity 1 37 0 4 674 279 298 0 0 chr3R 11794507 11794631 -16110422 + (CTG)n Simple_repeat Simple_repeat 3 126 0 4 675 206 81 27 0 chr3R 11799725 11799762 -16105291 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 675 24 32 0 0 chr3R 11800926 11800957 -16104096 + AT_rich Low_complexity Low_complexity 1 31 0 4 675 25 51 0 0 chr3R 11802855 11802894 -16102159 + AT_rich Low_complexity Low_complexity 1 39 0 4 675 24 32 0 0 chr3R 11808255 11808286 -16096767 + AT_rich Low_complexity Low_complexity 1 31 0 4 675 22 0 0 0 chr3R 11811271 11811293 -16093760 + AT_rich Low_complexity Low_complexity 1 22 0 4 675 203 162 0 0 chr3R 11811941 11811978 -16093075 + (CATCC)n Simple_repeat Simple_repeat 3 39 0 4 675 236 111 22 0 chr3R 11813023 11813068 -16091985 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 675 180 0 0 0 chr3R 11813410 11813430 -16091623 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 675 27 62 0 0 chr3R 11814648 11814696 -16090357 + AT_rich Low_complexity Low_complexity 1 48 0 4 675 23 54 0 0 chr3R 11817451 11817488 -16087565 + AT_rich Low_complexity Low_complexity 1 37 0 4 675 208 282 0 27 chr3R 11818886 11818959 -16086094 + (CAA)n Simple_repeat Simple_repeat 1 71 0 4 675 43 35 0 0 chr3R 11819403 11819460 -16085593 + AT_rich Low_complexity Low_complexity 1 57 0 4 675 241 260 0 48 chr3R 11820093 11820198 -16084855 + ROO_I LTR Pao 653 752 -7504 4 675 289 281 10 10 chr3R 11820365 11820462 -16084591 + (CAG)n Simple_repeat Simple_repeat 1 97 0 4 675 186 103 0 0 chr3R 11820487 11820516 -16084537 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 675 198 156 0 0 chr3R 11820661 11820706 -16084347 + (CAG)n Simple_repeat Simple_repeat 1 45 0 4 675 231 114 0 0 chr3R 11820761 11820796 -16084257 + (CAG)n Simple_repeat Simple_repeat 1 35 0 4 675 213 182 0 0 chr3R 11820972 11821005 -16084048 + (CGG)n Simple_repeat Simple_repeat 2 34 0 4 675 356 225 0 18 chr3R 11821156 11821269 -16083784 + ROO_I LTR Pao 631 741 -7515 4 675 216 0 0 0 chr3R 11823901 11823925 -16081128 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 675 228 35 0 0 chr3R 11823985 11824014 -16081039 + (CAG)n Simple_repeat Simple_repeat 3 31 0 4 675 200 204 41 0 chr3R 11824173 11824222 -16080831 + A-rich Low_complexity Low_complexity 4 54 0 4 675 450 125 0 0 chr3R 11825135 11825215 -16079838 + (CAG)n Simple_repeat Simple_repeat 1 80 0 4 675 207 167 0 0 chr3R 11825292 11825334 -16079719 + (CGG)n Simple_repeat Simple_repeat 1 42 0 4 675 212 178 0 22 chr3R 11826249 11826295 -16078758 + (CAAAC)n Simple_repeat Simple_repeat 2 46 0 4 675 22 35 0 0 chr3R 11826755 11826784 -16078269 + AT_rich Low_complexity Low_complexity 1 29 0 4 675 212 283 0 0 chr3R 11827036 11827089 -16077964 + (CGG)n Simple_repeat Simple_repeat 1 53 0 4 675 257 51 26 0 chr3R 11827169 11827208 -16077845 + (CAAAC)n Simple_repeat Simple_repeat 2 41 0 4 675 231 191 0 0 chr3R 11828174 11828221 -16076832 + (CAG)n Simple_repeat Simple_repeat 3 49 0 4 675 284 195 0 35 chr3R 11828497 11828582 -16076471 + (CAA)n Simple_repeat Simple_repeat 3 84 0 4 675 243 146 0 0 chr3R 11828686 11828727 -16076326 + (CGG)n Simple_repeat Simple_repeat 1 41 0 4 675 261 119 0 0 chr3R 11828987 11829029 -16076024 + (CAG)n Simple_repeat Simple_repeat 3 44 0 4 675 216 67 0 0 chr3R 11829099 11829129 -16075924 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 675 28 48 0 0 chr3R 11829669 11829711 -16075342 + AT_rich Low_complexity Low_complexity 1 42 0 4 675 635 40 182 0 chr3R 11830036 11830135 -16074918 - G5_DM LINE Jockey 0 4856 4740 4 675 216 297 0 15 chr3R 11830698 11830763 -16074290 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 4 675 203 125 0 24 chr3R 11834054 11834095 -16070958 + (CAA)n Simple_repeat Simple_repeat 1 40 0 4 675 24 0 0 0 chr3R 11838867 11838891 -16066162 + AT_rich Low_complexity Low_complexity 1 24 0 4 675 180 158 0 0 chr3R 11840179 11840217 -16064836 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 675 180 0 0 0 chr3R 11841512 11841532 -16063521 + (A)n Simple_repeat Simple_repeat 1 20 0 4 675 354 163 11 11 chr3R 11841945 11842032 -16063021 + ROO_I LTR Pao 643 729 -7527 4 675 221 163 0 23 chr3R 11842133 11842177 -16062876 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 675 261 135 0 0 chr3R 11842718 11842770 -16062283 + ROO_I LTR Pao 676 727 -7529 4 675 238 218 0 11 chr3R 11842837 11842925 -16062128 + ROO_I LTR Pao 651 737 -7519 4 675 211 114 29 0 chr3R 11845195 11845230 -16059823 + (GCATG)n Simple_repeat Simple_repeat 3 38 0 4 675 221 255 0 0 chr3R 11847898 11847945 -16057108 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 4 675 204 97 0 0 chr3R 11847964 11847995 -16057058 + (ATG)n Simple_repeat Simple_repeat 1 31 0 4 675 21 0 0 0 chr3R 11850923 11850944 -16054109 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 182 136 0 22 chr3R 11851546 11851591 -16053462 + CT-rich Low_complexity Low_complexity 1 44 0 4 675 22 70 0 0 chr3R 11852600 11852643 -16052410 + AT_rich Low_complexity Low_complexity 1 43 0 4 675 25 65 0 0 chr3R 11854091 11854137 -16050916 + AT_rich Low_complexity Low_complexity 1 46 0 4 675 25 31 0 0 chr3R 11854208 11854240 -16050813 + AT_rich Low_complexity Low_complexity 1 32 0 4 675 23 54 0 0 chr3R 11857605 11857642 -16047411 + AT_rich Low_complexity Low_complexity 1 37 0 4 675 31 44 0 0 chr3R 11859693 11859738 -16045315 + AT_rich Low_complexity Low_complexity 1 45 0 4 675 207 0 0 0 chr3R 11861606 11861629 -16043424 + (TCC)n Simple_repeat Simple_repeat 1 23 0 4 675 25 0 0 0 chr3R 11861842 11861867 -16043186 + AT_rich Low_complexity Low_complexity 1 25 0 4 675 243 61 0 0 chr3R 11862465 11862498 -16042555 + (TCTCCC)n Simple_repeat Simple_repeat 1 33 0 4 675 21 0 0 0 chr3R 11862677 11862698 -16042355 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 54 40 0 0 chr3R 11864196 11864271 -16040782 + AT_rich Low_complexity Low_complexity 1 75 0 4 675 435 83 0 0 chr3R 11865442 11865502 -16039551 + (CAG)n Simple_repeat Simple_repeat 3 62 0 4 675 633 78 39 0 chr3R 11866955 11867057 -16037996 - BS LINE Jockey -5 5121 5016 4 675 21 0 0 0 chr3R 11867883 11867904 -16037149 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 255 173 0 0 chr3R 11869499 11869551 -16035502 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 675 21 0 0 0 chr3R 11870469 11870490 -16034563 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 219 69 0 0 chr3R 11871871 11871900 -16033153 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 675 21 0 0 0 chr3R 11882989 11883010 -16022043 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 23 0 0 0 chr3R 11884666 11884689 -16020364 + AT_rich Low_complexity Low_complexity 1 23 0 4 675 184 73 0 89 chr3R 11895144 11895189 -16009864 + (CGGAG)n Simple_repeat Simple_repeat 5 45 0 4 675 225 0 0 0 chr3R 11898240 11898265 -16006788 + (T)n Simple_repeat Simple_repeat 1 25 0 4 675 27 0 0 0 chr3R 11899405 11899432 -16005621 + AT_rich Low_complexity Low_complexity 1 27 0 4 675 21 36 0 0 chr3R 11903318 11903346 -16001707 + AT_rich Low_complexity Low_complexity 1 28 0 4 675 309 151 0 0 chr3R 11907983 11908036 -15997017 + (CATA)n Simple_repeat Simple_repeat 3 55 0 4 675 205 184 0 0 chr3R 11911246 11911284 -15993769 + (CAGCT)n Simple_repeat Simple_repeat 1 38 0 4 675 21 0 0 0 chr3R 11912799 11912820 -15992233 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 21 57 0 0 chr3R 11913319 11913354 -15991699 + AT_rich Low_complexity Low_complexity 1 35 0 4 675 186 191 0 0 chr3R 11919876 11919923 -15985130 + A-rich Low_complexity Low_complexity 4 50 0 4 675 26 0 0 0 chr3R 11920235 11920261 -15984792 + AT_rich Low_complexity Low_complexity 1 26 0 4 675 200 174 0 42 chr3R 11921889 11921937 -15983116 + (CTTAT)n Simple_repeat Simple_repeat 5 50 0 4 675 21 57 0 0 chr3R 11924670 11924705 -15980348 + AT_rich Low_complexity Low_complexity 1 35 0 4 675 235 140 35 0 chr3R 11925190 11925247 -15979806 + ROO_I LTR Pao 653 711 -7545 4 675 286 288 0 0 chr3R 11925470 11925581 -15979472 + (CA)n Simple_repeat Simple_repeat 1 111 0 4 675 242 236 18 0 chr3R 11925899 11925954 -15979099 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 4 675 225 177 12 60 chr3R 11926134 11926218 -15978835 + (CAATC)n Simple_repeat Simple_repeat 2 81 0 4 676 22 0 0 0 chr3R 11928942 11928964 -15976089 + AT_rich Low_complexity Low_complexity 1 22 0 4 676 309 100 0 0 chr3R 11929124 11929174 -15975879 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 676 37 52 0 0 chr3R 11929728 11929786 -15975267 + AT_rich Low_complexity Low_complexity 1 58 0 4 676 30 27 0 0 chr3R 11930157 11930194 -15974859 + AT_rich Low_complexity Low_complexity 1 37 0 4 676 29 28 0 0 chr3R 11931233 11931269 -15973784 + AT_rich Low_complexity Low_complexity 1 36 0 4 676 201 74 0 0 chr3R 11932971 11932998 -15972055 + (CAG)n Simple_repeat Simple_repeat 3 29 0 4 676 273 75 0 0 chr3R 11934876 11934916 -15970137 + (GTATG)n Simple_repeat Simple_repeat 4 43 0 4 676 23 0 0 0 chr3R 11935137 11935160 -15969893 + AT_rich Low_complexity Low_complexity 1 23 0 4 676 231 88 0 0 chr3R 11936838 11936872 -15968181 + (T)n Simple_repeat Simple_repeat 1 34 0 4 676 41 21 0 0 chr3R 11938107 11938155 -15966898 + AT_rich Low_complexity Low_complexity 1 48 0 4 676 321 93 0 0 chr3R 11938473 11938527 -15966526 + (CATCC)n Simple_repeat Simple_repeat 5 58 0 4 676 267 229 0 14 chr3R 11940062 11940133 -15964920 - ROO_I LTR Pao -7542 714 645 4 676 220 206 13 40 chr3R 11941671 11941747 -15963306 + T-rich Low_complexity Low_complexity 3 76 0 4 676 192 125 0 0 chr3R 11942718 11942750 -15962303 + (CCTAT)n Simple_repeat Simple_repeat 4 35 0 4 676 24 0 0 0 chr3R 11944154 11944178 -15960875 + AT_rich Low_complexity Low_complexity 1 24 0 4 676 202 214 0 0 chr3R 11947909 11947951 -15957102 + (CAT)n Simple_repeat Simple_repeat 1 42 0 4 676 183 277 0 0 chr3R 11951225 11951290 -15953763 + (CCCCAG)n Simple_repeat Simple_repeat 5 69 0 4 676 204 111 0 0 chr3R 11955389 11955425 -15949628 + (A)n Simple_repeat Simple_repeat 1 36 0 4 676 21 57 0 0 chr3R 11957008 11957043 -15948010 + AT_rich Low_complexity Low_complexity 1 35 0 4 676 21 36 0 0 chr3R 11958400 11958428 -15946625 + AT_rich Low_complexity Low_complexity 1 28 0 4 676 21 36 0 0 chr3R 11959934 11959962 -15945091 + AT_rich Low_complexity Low_complexity 1 28 0 4 676 195 42 0 0 chr3R 11960440 11960464 -15944589 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 4 676 255 103 0 0 chr3R 11966068 11966107 -15938946 + (CAG)n Simple_repeat Simple_repeat 3 41 0 4 676 24 32 0 0 chr3R 11967028 11967059 -15937994 + AT_rich Low_complexity Low_complexity 1 31 0 4 676 205 302 0 19 chr3R 11967241 11967295 -15937758 + (CCCCAG)n Simple_repeat Simple_repeat 2 54 0 4 676 252 77 0 0 chr3R 11967409 11967448 -15937605 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 676 252 257 10 10 chr3R 11968459 11968561 -15936492 + (CAA)n Simple_repeat Simple_repeat 1 102 0 4 676 26 30 0 0 chr3R 11976692 11976725 -15928328 + AT_rich Low_complexity Low_complexity 1 33 0 4 676 36 23 0 0 chr3R 11976843 11976886 -15928167 + AT_rich Low_complexity Low_complexity 1 43 0 4 676 182 37 0 36 chr3R 11978533 11978561 -15926492 + (CCCTAA)n Simple_repeat Simple_repeat 1 27 0 4 676 34 42 0 0 chr3R 11980327 11980375 -15924678 + AT_rich Low_complexity Low_complexity 1 48 0 4 676 180 0 0 0 chr3R 11981415 11981435 -15923618 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 676 24 32 0 0 chr3R 11982190 11982221 -15922832 + AT_rich Low_complexity Low_complexity 1 31 0 4 676 21 0 0 0 chr3R 11984113 11984134 -15920919 + AT_rich Low_complexity Low_complexity 1 21 0 4 676 192 97 0 0 chr3R 11984677 11984708 -15920345 + (A)n Simple_repeat Simple_repeat 1 31 0 4 676 224 204 0 0 chr3R 11984862 11984906 -15920147 + (CAG)n Simple_repeat Simple_repeat 3 46 0 4 676 272 181 0 27 chr3R 11985173 11985247 -15919806 + (CAA)n Simple_repeat Simple_repeat 1 72 0 4 676 25 51 0 0 chr3R 11985481 11985520 -15919533 + AT_rich Low_complexity Low_complexity 1 39 0 4 676 254 179 0 18 chr3R 11986647 11986704 -15918349 + (CCGAA)n Simple_repeat Simple_repeat 4 59 0 4 676 222 105 0 0 chr3R 11988499 11988537 -15916516 + (CATCC)n Simple_repeat Simple_repeat 4 41 0 4 676 186 150 0 0 chr3R 11990637 11990677 -15914376 + (CTG)n Simple_repeat Simple_repeat 3 42 0 4 676 191 103 26 0 chr3R 11994956 11994995 -15910058 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 4 676 32 0 0 0 chr3R 11996437 11996469 -15908584 + AT_rich Low_complexity Low_complexity 1 32 0 4 676 180 0 0 0 chr3R 11996689 11996709 -15908344 + (TCG)n Simple_repeat Simple_repeat 2 21 0 4 676 209 176 38 38 chr3R 11997036 11997089 -15907964 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 4 676 242 29 29 0 chr3R 11997447 11997482 -15907571 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 4 676 29 0 0 0 chr3R 12000705 12000734 -15904319 + AT_rich Low_complexity Low_complexity 1 29 0 4 676 21 36 0 0 chr3R 12001251 12001279 -15903774 + AT_rich Low_complexity Low_complexity 1 28 0 4 676 22 70 0 0 chr3R 12007717 12007760 -15897293 + AT_rich Low_complexity Low_complexity 1 43 0 4 676 259 230 13 51 chr3R 12009998 12010076 -15894977 - ROO_I LTR Pao -7525 731 657 4 676 203 88 29 0 chr3R 12010236 12010270 -15894783 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 4 676 186 43 0 0 chr3R 12013098 12013121 -15891932 + (CAG)n Simple_repeat Simple_repeat 3 25 0 4 676 3235 3 0 0 chr3R 12015186 12015532 -15889521 - Invader4_LTR LTR Gypsy 0 346 1 4 676 22 35 0 0 chr3R 12015672 12015701 -15889352 + AT_rich Low_complexity Low_complexity 1 29 0 4 676 25 31 0 0 chr3R 12017665 12017697 -15887356 + AT_rich Low_complexity Low_complexity 1 32 0 4 676 235 204 0 0 chr3R 12018856 12018900 -15886153 + (CAG)n Simple_repeat Simple_repeat 3 46 0 4 676 207 284 30 0 chr3R 12019293 12019360 -15885693 + (TGGA)n Simple_repeat Simple_repeat 4 72 0 4 676 21 71 0 0 chr3R 12029116 12029158 -15875895 + AT_rich Low_complexity Low_complexity 1 42 0 4 676 34 24 0 0 chr3R 12031098 12031139 -15873914 + AT_rich Low_complexity Low_complexity 1 41 0 4 676 302 221 0 0 chr3R 12032035 12032112 -15872941 + ROO_I LTR Pao 643 719 -7537 4 676 218 167 0 16 chr3R 12033013 12033074 -15871979 + (CGAA)n Simple_repeat Simple_repeat 3 62 0 4 676 311 191 0 0 chr3R 12033150 12033218 -15871835 - ROO_I LTR Pao -7514 742 675 4 676 271 241 0 0 chr3R 12034068 12034122 -15870931 + G-rich Low_complexity Low_complexity 6 59 0 4 676 183 191 44 0 chr3R 12034357 12034425 -15870628 + (GCTTG)n Simple_repeat Simple_repeat 3 73 0 4 676 22 0 0 0 chr3R 12034898 12034920 -15870133 + AT_rich Low_complexity Low_complexity 1 22 0 4 676 270 116 0 0 chr3R 12035315 12035358 -15869695 + (ACCG)n Simple_repeat Simple_repeat 2 44 0 4 676 23 54 0 0 chr3R 12035719 12035756 -15869297 + AT_rich Low_complexity Low_complexity 1 37 0 4 676 24 91 0 0 chr3R 12037495 12037561 -15867492 + AT_rich Low_complexity Low_complexity 1 66 0 4 676 210 118 0 0 chr3R 12038412 12038446 -15866607 + (CCA)n Simple_repeat Simple_repeat 2 35 0 4 676 206 252 19 28 chr3R 12039373 12039479 -15865574 + (CCCA)n Simple_repeat Simple_repeat 2 106 0 4 676 24 32 0 0 chr3R 12039613 12039644 -15865409 + AT_rich Low_complexity Low_complexity 1 31 0 4 676 210 179 0 0 chr3R 12040035 12040091 -15864962 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 676 279 71 0 0 chr3R 12040267 12040309 -15864744 + (CAAGG)n Simple_repeat Simple_repeat 1 42 0 4 676 203 162 0 0 chr3R 12040499 12040536 -15864517 + (CCTTG)n Simple_repeat Simple_repeat 1 37 0 4 676 216 163 0 0 chr3R 12042489 12042532 -15862521 + (CTG)n Simple_repeat Simple_repeat 3 45 0 4 676 25 0 0 0 chr3R 12043529 12043554 -15861499 + AT_rich Low_complexity Low_complexity 1 25 0 4 676 189 0 0 0 chr3R 12044278 12044299 -15860754 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 4 676 183 80 0 0 chr3R 12044302 12044327 -15860726 + (CTG)n Simple_repeat Simple_repeat 2 26 0 4 676 249 208 19 0 chr3R 12044483 12044536 -15860517 + (CTG)n Simple_repeat Simple_repeat 3 56 0 4 676 204 226 0 0 chr3R 12047155 12047217 -15857836 + (CCCA)n Simple_repeat Simple_repeat 4 65 0 4 676 213 39 0 0 chr3R 12047258 12047284 -15857769 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 676 238 214 18 0 chr3R 12047335 12047391 -15857662 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 676 198 174 0 0 chr3R 12047424 12047470 -15857583 + (TTG)n Simple_repeat Simple_repeat 1 46 0 4 676 183 80 0 0 chr3R 12047479 12047504 -15857549 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 676 212 300 0 39 chr3R 12047986 12048090 -15856963 + (TATATG)n Simple_repeat Simple_repeat 2 101 0 4 676 304 289 10 0 chr3R 12049286 12049383 -15855670 + (CTG)n Simple_repeat Simple_repeat 3 100 0 4 676 21 82 0 0 chr3R 12049572 12049621 -15855432 + AT_rich Low_complexity Low_complexity 1 49 0 4 676 228 283 0 0 chr3R 12050080 12050140 -15854913 + (CAGAGA)n Simple_repeat Simple_repeat 1 60 0 4 677 246 62 0 0 chr3R 12061103 12061135 -15843918 + (CAACT)n Simple_repeat Simple_repeat 3 34 0 4 677 200 259 17 0 chr3R 12061478 12061536 -15843517 + (CGGT)n Simple_repeat Simple_repeat 1 59 0 4 677 23 54 0 0 chr3R 12061772 12061809 -15843244 + AT_rich Low_complexity Low_complexity 1 37 0 4 677 38 22 0 0 chr3R 12061837 12061882 -15843171 + AT_rich Low_complexity Low_complexity 1 45 0 4 677 202 200 0 0 chr3R 12062118 12062158 -15842895 + (CTG)n Simple_repeat Simple_repeat 2 41 0 4 677 201 121 0 0 chr3R 12063101 12063134 -15841919 + (TTG)n Simple_repeat Simple_repeat 3 35 0 4 677 210 278 0 0 chr3R 12065386 12065440 -15839613 + (CCG)n Simple_repeat Simple_repeat 3 56 0 4 677 25 0 0 0 chr3R 12066138 12066163 -15838890 + AT_rich Low_complexity Low_complexity 1 25 0 4 677 187 114 22 22 chr3R 12066989 12067034 -15838019 + GA-rich Low_complexity Low_complexity 3 47 0 4 677 29 0 0 0 chr3R 12068739 12068768 -15836285 + AT_rich Low_complexity Low_complexity 1 29 0 4 677 26 50 0 0 chr3R 12070033 12070073 -15834980 + AT_rich Low_complexity Low_complexity 1 40 0 4 677 231 290 0 0 chr3R 12071404 12071473 -15833580 + (CGG)n Simple_repeat Simple_repeat 2 70 0 4 677 202 224 20 0 chr3R 12071636 12071685 -15833368 + (CAG)n Simple_repeat Simple_repeat 3 52 0 4 677 216 204 19 0 chr3R 12073877 12073931 -15831122 + (CCA)n Simple_repeat Simple_repeat 1 55 0 4 677 216 67 0 0 chr3R 12075663 12075693 -15829360 + (CGAA)n Simple_repeat Simple_repeat 1 30 0 4 677 201 250 0 20 chr3R 12075837 12075886 -15829167 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 677 226 172 17 0 chr3R 12079935 12079993 -15825060 - ROO_I LTR Pao -7533 723 665 4 677 213 139 0 0 chr3R 12080160 12080203 -15824850 + (CAGC)n Simple_repeat Simple_repeat 1 43 0 4 677 22 0 0 0 chr3R 12080313 12080335 -15824718 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 309 266 0 0 chr3R 12083225 12083319 -15821734 + (CAG)n Simple_repeat Simple_repeat 1 94 0 4 677 317 147 0 56 chr3R 12083944 12084052 -15821001 + (CAG)n Simple_repeat Simple_repeat 3 104 0 4 677 216 266 15 15 chr3R 12084308 12084373 -15820680 + (CAG)n Simple_repeat Simple_repeat 2 66 0 4 677 228 207 35 47 chr3R 12084450 12084536 -15820517 + ROO_I LTR Pao 641 725 -7531 4 677 274 240 18 55 chr3R 12085934 12086044 -15819009 + A-rich Low_complexity Low_complexity 3 108 0 4 677 201 39 0 0 chr3R 12086456 12086482 -15818571 + (TATATG)n Simple_repeat Simple_repeat 4 29 0 4 677 24 53 0 0 chr3R 12086574 12086612 -15818441 + AT_rich Low_complexity Low_complexity 1 38 0 4 677 32 0 0 0 chr3R 12086946 12086978 -15818075 + AT_rich Low_complexity Low_complexity 1 32 0 4 677 27 0 0 0 chr3R 12089926 12089953 -15815100 + AT_rich Low_complexity Low_complexity 1 27 0 4 677 27 29 0 0 chr3R 12091665 12091699 -15813354 + AT_rich Low_complexity Low_complexity 1 34 0 4 677 22 56 0 0 chr3R 12092613 12092649 -15812404 + AT_rich Low_complexity Low_complexity 1 36 0 4 677 21 0 0 0 chr3R 12098054 12098075 -15806978 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 28 48 0 0 chr3R 12098377 12098419 -15806634 + AT_rich Low_complexity Low_complexity 1 42 0 4 677 220 250 0 0 chr3R 12098957 12099009 -15806044 + (CGTG)n Simple_repeat Simple_repeat 1 52 0 4 677 267 93 0 0 chr3R 12103480 12103523 -15801530 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 677 22 0 0 0 chr3R 12104257 12104279 -15800774 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 22 0 0 0 chr3R 12104770 12104792 -15800261 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 192 125 0 0 chr3R 12107341 12107373 -15797680 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 677 23 0 0 0 chr3R 12108140 12108163 -15796890 + AT_rich Low_complexity Low_complexity 1 23 0 4 677 204 111 0 0 chr3R 12108961 12108997 -15796056 + (A)n Simple_repeat Simple_repeat 1 36 0 4 677 21 36 0 0 chr3R 12109396 12109424 -15795629 + AT_rich Low_complexity Low_complexity 1 28 0 4 677 29 47 0 0 chr3R 12111981 12112024 -15793029 + AT_rich Low_complexity Low_complexity 1 43 0 4 677 23 0 0 0 chr3R 12118996 12119019 -15786034 + AT_rich Low_complexity Low_complexity 1 23 0 4 677 237 33 0 0 chr3R 12119166 12119196 -15785857 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 677 24 0 0 0 chr3R 12120080 12120104 -15784949 + AT_rich Low_complexity Low_complexity 1 24 0 4 677 21 0 0 0 chr3R 12120414 12120435 -15784618 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 225 154 0 0 chr3R 12121349 12121388 -15783665 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 4 677 36 0 0 0 chr3R 12122000 12122036 -15783017 + AT_rich Low_complexity Low_complexity 1 36 0 4 677 28 48 0 0 chr3R 12122309 12122351 -15782702 + AT_rich Low_complexity Low_complexity 1 42 0 4 677 21 0 0 0 chr3R 12124915 12124936 -15780117 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 230 231 19 28 chr3R 12127842 12127949 -15777104 + A-rich Low_complexity Low_complexity 4 109 0 4 677 278 240 0 28 chr3R 12127958 12128065 -15776988 + (TTA)n Simple_repeat Simple_repeat 3 106 0 4 677 21 36 0 0 chr3R 12128286 12128314 -15776739 + AT_rich Low_complexity Low_complexity 1 28 0 4 677 23 68 0 0 chr3R 12129646 12129690 -15775363 + AT_rich Low_complexity Low_complexity 1 44 0 4 677 22 35 0 0 chr3R 12129982 12130011 -15775042 + AT_rich Low_complexity Low_complexity 1 29 0 4 677 235 274 0 0 chr3R 12130487 12130571 -15774482 + A-rich Low_complexity Low_complexity 1 84 0 4 677 235 191 0 31 chr3R 12131837 12131902 -15773151 + A-rich Low_complexity Low_complexity 2 64 0 4 677 186 43 0 0 chr3R 12132015 12132038 -15773015 + (CGA)n Simple_repeat Simple_repeat 2 24 0 4 677 25 0 0 0 chr3R 12136300 12136325 -15768728 + AT_rich Low_complexity Low_complexity 1 25 0 4 677 205 176 0 0 chr3R 12144585 12144619 -15760434 + (CATATA)n Simple_repeat Simple_repeat 4 37 0 4 677 21 0 0 0 chr3R 12145957 12145978 -15759075 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 22 0 0 0 chr3R 12147231 12147253 -15757800 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 340 87 0 0 chr3R 12155409 12155455 -15749598 - DNAREP1_DM LINE Penelope -548 46 1 4 677 21 0 0 0 chr3R 12162167 12162188 -15742865 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 222 191 0 0 chr3R 12166570 12166617 -15738436 + (CCG)n Simple_repeat Simple_repeat 2 48 0 4 677 180 0 0 0 chr3R 12168648 12168668 -15736385 + (CAG)n Simple_repeat Simple_repeat 1 20 0 4 677 24 91 0 0 chr3R 12180079 12180145 -15724908 + AT_rich Low_complexity Low_complexity 1 66 0 4 677 29 0 0 0 chr3R 12185272 12185301 -15719752 + AT_rich Low_complexity Low_complexity 1 29 0 4 677 260 256 11 11 chr3R 12187382 12187473 -15717580 + (TGG)n Simple_repeat Simple_repeat 3 93 0 4 677 33 56 0 0 chr3R 12188175 12188229 -15716824 + AT_rich Low_complexity Low_complexity 1 54 0 4 678 28 0 0 0 chr3R 12197061 12197089 -15707964 + AT_rich Low_complexity Low_complexity 1 28 0 4 678 246 81 0 0 chr3R 12197654 12197691 -15707362 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 678 23 54 0 0 chr3R 12200228 12200265 -15704788 + AT_rich Low_complexity Low_complexity 1 37 0 4 678 301 270 0 26 chr3R 12201382 12201496 -15703557 + (CTG)n Simple_repeat Simple_repeat 2 112 0 4 678 207 100 0 0 chr3R 12202115 12202145 -15702908 + (ATGGTG)n Simple_repeat Simple_repeat 1 30 0 4 678 211 184 0 0 chr3R 12202167 12202205 -15702848 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 678 216 0 0 0 chr3R 12207683 12207707 -15697346 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 678 207 0 0 0 chr3R 12208057 12208080 -15696973 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 678 22 35 0 0 chr3R 12209244 12209273 -15695780 + AT_rich Low_complexity Low_complexity 1 29 0 4 678 183 80 0 0 chr3R 12212925 12212950 -15692103 + (CACCAT)n Simple_repeat Simple_repeat 4 28 0 4 678 23 0 0 0 chr3R 12213583 12213606 -15691447 + AT_rich Low_complexity Low_complexity 1 23 0 4 678 21 36 0 0 chr3R 12213682 12213710 -15691343 + AT_rich Low_complexity Low_complexity 1 28 0 4 678 189 175 0 0 chr3R 12214669 12214709 -15690344 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 4 678 240 154 0 0 chr3R 12217152 12217204 -15687849 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 678 221 254 0 0 chr3R 12222081 12222136 -15682917 + (CAA)n Simple_repeat Simple_repeat 2 56 0 4 678 220 262 0 15 chr3R 12222284 12222350 -15682703 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 678 235 241 0 0 chr3R 12222477 12222531 -15682522 + GA-rich Low_complexity Low_complexity 2 55 0 4 678 21 0 0 0 chr3R 12222682 12222703 -15682350 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 27 49 0 0 chr3R 12222828 12222869 -15682184 + AT_rich Low_complexity Low_complexity 1 41 0 4 678 22 56 0 0 chr3R 12225604 12225640 -15679413 + AT_rich Low_complexity Low_complexity 1 36 0 4 678 182 156 0 22 chr3R 12227070 12227116 -15677937 + (CAT)n Simple_repeat Simple_repeat 3 47 0 4 678 28 86 0 0 chr3R 12228348 12228418 -15676635 + AT_rich Low_complexity Low_complexity 1 70 0 4 678 183 162 0 0 chr3R 12230849 12230886 -15674167 + (GAGTG)n Simple_repeat Simple_repeat 4 40 0 4 678 314 102 0 33 chr3R 12232512 12232573 -15672480 + (CCA)n Simple_repeat Simple_repeat 2 60 0 4 678 221 224 0 0 chr3R 12235445 12235494 -15669559 + (CATCC)n Simple_repeat Simple_repeat 1 49 0 4 678 201 39 0 0 chr3R 12236372 12236398 -15668655 + (TATCG)n Simple_repeat Simple_repeat 3 28 0 4 678 189 211 0 0 chr3R 12236404 12236456 -15668597 + (GTTTG)n Simple_repeat Simple_repeat 5 56 0 4 678 22 0 0 0 chr3R 12236990 12237012 -15668041 + AT_rich Low_complexity Low_complexity 1 22 0 4 678 203 250 0 0 chr3R 12238300 12238344 -15666709 + CT-rich Low_complexity Low_complexity 2 45 0 4 678 21 36 0 0 chr3R 12238785 12238813 -15666240 + AT_rich Low_complexity Low_complexity 1 28 0 4 678 189 107 0 0 chr3R 12239696 12239724 -15665329 + (CTCA)n Simple_repeat Simple_repeat 4 31 0 4 678 180 176 0 0 chr3R 12241478 12241512 -15663541 + (TTTCG)n Simple_repeat Simple_repeat 2 35 0 4 678 23 33 0 0 chr3R 12241587 12241617 -15663436 + AT_rich Low_complexity Low_complexity 1 30 0 4 678 23 0 0 0 chr3R 12245956 12245979 -15659074 + AT_rich Low_complexity Low_complexity 1 23 0 4 678 24 32 0 0 chr3R 12246677 12246708 -15658345 + AT_rich Low_complexity Low_complexity 1 31 0 4 678 25 0 0 0 chr3R 12248876 12248901 -15656152 + AT_rich Low_complexity Low_complexity 1 25 0 4 678 210 71 0 0 chr3R 12250068 12250096 -15654957 + (CACTC)n Simple_repeat Simple_repeat 5 32 0 4 678 192 97 0 0 chr3R 12250131 12250162 -15654891 + (CGAT)n Simple_repeat Simple_repeat 3 33 0 4 678 22 0 0 0 chr3R 12250643 12250665 -15654388 + AT_rich Low_complexity Low_complexity 1 22 0 4 678 21 0 0 0 chr3R 12253228 12253249 -15651804 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 37 93 0 0 chr3R 12254939 12255046 -15650007 + AT_rich Low_complexity Low_complexity 1 107 0 4 678 23 54 0 0 chr3R 12258597 12258634 -15646419 + AT_rich Low_complexity Low_complexity 1 37 0 4 678 22 0 0 0 chr3R 12262049 12262071 -15642982 + AT_rich Low_complexity Low_complexity 1 22 0 4 678 24 0 0 0 chr3R 12273855 12273879 -15631174 + AT_rich Low_complexity Low_complexity 1 24 0 4 678 21 0 0 0 chr3R 12274039 12274060 -15630993 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 41 21 0 0 chr3R 12279665 12279713 -15625340 + AT_rich Low_complexity Low_complexity 1 48 0 4 678 27 0 0 0 chr3R 12284067 12284094 -15620959 + AT_rich Low_complexity Low_complexity 1 27 0 4 678 51 79 0 0 chr3R 12295666 12295780 -15609273 + AT_rich Low_complexity Low_complexity 1 114 0 4 678 22 94 0 0 chr3R 12298828 12298892 -15606161 + AT_rich Low_complexity Low_complexity 1 64 0 4 678 23 33 0 0 chr3R 12298934 12298964 -15606089 + AT_rich Low_complexity Low_complexity 1 30 0 4 678 30 83 0 0 chr3R 12301654 12301726 -15603327 + AT_rich Low_complexity Low_complexity 1 72 0 4 678 209 222 16 16 chr3R 12311357 12311421 -15593632 + (CTG)n Simple_repeat Simple_repeat 2 65 0 4 678 300 178 0 0 chr3R 12312084 12312157 -15592896 + ROO_I LTR Pao 663 735 -7521 4 678 22 56 0 0 chr3R 12318338 12318374 -15586679 + AT_rich Low_complexity Low_complexity 1 36 0 4 679 186 128 0 0 chr3R 12321578 12321617 -15583436 + (ATGGTG)n Simple_repeat Simple_repeat 6 44 0 4 679 31 0 0 0 chr3R 12323330 12323361 -15581692 + AT_rich Low_complexity Low_complexity 1 31 0 4 679 21 0 0 0 chr3R 12325852 12325873 -15579180 + AT_rich Low_complexity Low_complexity 1 21 0 4 679 228 246 0 40 chr3R 12330423 12330499 -15574554 + (TGAA)n Simple_repeat Simple_repeat 3 75 0 4 679 183 167 0 0 chr3R 12336215 12336257 -15568796 + (ATGGTG)n Simple_repeat Simple_repeat 6 47 0 4 679 251 220 0 17 chr3R 12336547 12336607 -15568446 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 679 201 197 0 0 chr3R 12337241 12337302 -15567751 + (CAT)n Simple_repeat Simple_repeat 3 63 0 4 679 201 263 0 0 chr3R 12338984 12339041 -15566012 + A-rich Low_complexity Low_complexity 1 57 0 4 679 289 107 0 0 chr3R 12339402 12339458 -15565595 + ROO_I LTR Pao 675 730 -7526 4 679 219 152 0 0 chr3R 12340664 12340710 -15564343 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 679 23 0 0 0 chr3R 12342132 12342155 -15562898 + AT_rich Low_complexity Low_complexity 1 23 0 4 679 189 107 0 0 chr3R 12342525 12342553 -15562500 + (TTCGG)n Simple_repeat Simple_repeat 5 32 0 4 679 237 65 0 0 chr3R 12344377 12344408 -15560645 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 679 197 119 0 23 chr3R 12346252 12346295 -15558758 + (TCC)n Simple_repeat Simple_repeat 3 44 0 4 679 183 80 0 0 chr3R 12348158 12348183 -15556870 + (T)n Simple_repeat Simple_repeat 1 25 0 4 679 192 77 0 0 chr3R 12349014 12349040 -15556013 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 679 21 0 0 0 chr3R 12349972 12349993 -15555060 + AT_rich Low_complexity Low_complexity 1 21 0 4 679 26 0 0 0 chr3R 12353664 12353690 -15551363 + AT_rich Low_complexity Low_complexity 1 26 0 4 679 260 259 22 11 chr3R 12355844 12355934 -15549119 + (TTG)n Simple_repeat Simple_repeat 3 93 0 4 679 203 268 14 14 chr3R 12356287 12356359 -15548694 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 679 23 33 0 0 chr3R 12359370 12359400 -15545653 + AT_rich Low_complexity Low_complexity 1 30 0 4 679 321 176 0 0 chr3R 12359631 12359705 -15545348 + (TCCA)n Simple_repeat Simple_repeat 3 76 0 4 679 43 20 0 0 chr3R 12360202 12360252 -15544801 + AT_rich Low_complexity Low_complexity 1 50 0 4 679 21 82 0 0 chr3R 12360316 12360365 -15544688 + AT_rich Low_complexity Low_complexity 1 49 0 4 679 506 162 19 19 chr3R 12361042 12361149 -15543904 - Transib-N1_DM DNA Transib -407 107 1 4 679 189 74 0 0 chr3R 12361173 12361200 -15543853 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 679 28 0 0 0 chr3R 12362893 12362921 -15542132 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 243 0 0 0 chr3R 12365029 12365056 -15539997 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 679 203 152 0 0 chr3R 12365386 12365419 -15539634 + (CTG)n Simple_repeat Simple_repeat 2 34 0 4 679 201 167 0 0 chr3R 12367330 12367366 -15537687 + (CATAC)n Simple_repeat Simple_repeat 1 36 0 4 679 21 36 0 0 chr3R 12368184 12368212 -15536841 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 195 42 0 0 chr3R 12368530 12368554 -15536499 + (TTA)n Simple_repeat Simple_repeat 3 26 0 4 679 27 29 0 0 chr3R 12374668 12374702 -15530351 + AT_rich Low_complexity Low_complexity 1 34 0 4 679 25 31 0 0 chr3R 12377268 12377300 -15527753 + AT_rich Low_complexity Low_complexity 1 32 0 4 679 27 29 0 0 chr3R 12379419 12379453 -15525600 + AT_rich Low_complexity Low_complexity 1 34 0 4 679 24 0 0 0 chr3R 12379545 12379569 -15525484 + AT_rich Low_complexity Low_complexity 1 24 0 4 679 279 200 0 51 chr3R 12381784 12381863 -15523190 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 4 679 230 196 22 0 chr3R 12382960 12383006 -15522047 + (TTCTG)n Simple_repeat Simple_repeat 5 51 0 4 679 26 0 0 0 chr3R 12384829 12384855 -15520198 + AT_rich Low_complexity Low_complexity 1 26 0 4 679 241 231 0 0 chr3R 12392516 12392581 -15512472 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 679 200 278 0 0 chr3R 12394317 12394371 -15510682 + (CATATA)n Simple_repeat Simple_repeat 2 55 0 4 679 208 279 0 0 chr3R 12395871 12395950 -15509103 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 679 203 158 0 0 chr3R 12396043 12396081 -15508972 + GA-rich Low_complexity Low_complexity 2 39 0 4 679 29 0 0 0 chr3R 12400705 12400734 -15504319 + AT_rich Low_complexity Low_complexity 1 29 0 4 679 324 70 0 0 chr3R 12402429 12402472 -15502581 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 679 21 0 0 0 chr3R 12406211 12406232 -15498821 + AT_rich Low_complexity Low_complexity 1 21 0 4 679 204 40 0 0 chr3R 12408806 12408831 -15496222 + (ACTG)n Simple_repeat Simple_repeat 3 27 0 4 679 183 42 0 0 chr3R 12409241 12409265 -15495788 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 679 285 29 0 0 chr3R 12409584 12409618 -15495435 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 679 22 56 0 0 chr3R 12416314 12416350 -15488703 + AT_rich Low_complexity Low_complexity 1 36 0 4 679 262 219 0 0 chr3R 12417208 12417272 -15487781 + ROO_I LTR Pao 668 731 -7525 4 679 180 0 0 0 chr3R 12417378 12417398 -15487655 + (CTG)n Simple_repeat Simple_repeat 1 20 0 4 679 222 271 0 17 chr3R 12418157 12418217 -15486836 + (CTG)n Simple_repeat Simple_repeat 3 61 0 4 679 405 163 0 32 chr3R 12418336 12418431 -15486622 - ROO_I LTR Pao -7522 734 643 4 679 213 94 0 0 chr3R 12419992 12420024 -15485029 + (TTG)n Simple_repeat Simple_repeat 1 32 0 4 679 27 0 0 0 chr3R 12420379 12420406 -15484647 + AT_rich Low_complexity Low_complexity 1 27 0 4 679 28 0 0 0 chr3R 12421145 12421173 -15483880 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 243 61 0 0 chr3R 12426669 12426702 -15478351 + (TAGA)n Simple_repeat Simple_repeat 3 35 0 4 679 21 36 0 0 chr3R 12426994 12427022 -15478031 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 297 109 0 0 chr3R 12427530 12427576 -15477477 + (GCTG)n Simple_repeat Simple_repeat 3 48 0 4 679 240 163 0 0 chr3R 12428020 12428063 -15476990 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 679 200 77 115 0 chr3R 12430680 12430732 -15474321 + (CTAG)n Simple_repeat Simple_repeat 4 61 0 4 679 32 26 0 0 chr3R 12434008 12434047 -15471006 + AT_rich Low_complexity Low_complexity 1 39 0 4 679 32 26 0 0 chr3R 12440217 12440256 -15464797 + AT_rich Low_complexity Low_complexity 1 39 0 4 679 23 78 0 0 chr3R 12440478 12440529 -15464524 + AT_rich Low_complexity Low_complexity 1 51 0 4 679 25 31 0 0 chr3R 12445480 12445512 -15459541 + AT_rich Low_complexity Low_complexity 1 32 0 4 679 23 0 0 0 chr3R 12446038 12446061 -15458992 + AT_rich Low_complexity Low_complexity 1 23 0 4 680 210 326 0 10 chr3R 12451946 12452042 -15453011 + GA-rich Low_complexity Low_complexity 2 96 0 4 680 25 0 0 0 chr3R 12453267 12453292 -15451761 + AT_rich Low_complexity Low_complexity 1 25 0 4 680 22 0 0 0 chr3R 12454381 12454403 -15450650 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 258 136 0 0 chr3R 12455235 12455279 -15449774 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 680 55 0 0 0 chr3R 12459101 12459156 -15445897 + AT_rich Low_complexity Low_complexity 1 55 0 4 680 26 30 0 0 chr3R 12461445 12461478 -15443575 + AT_rich Low_complexity Low_complexity 1 33 0 4 680 231 146 0 0 chr3R 12466237 12466278 -15438775 + (TGG)n Simple_repeat Simple_repeat 1 41 0 4 680 24 32 0 0 chr3R 12468082 12468113 -15436940 + AT_rich Low_complexity Low_complexity 1 31 0 4 680 21 57 0 0 chr3R 12469154 12469189 -15435864 + AT_rich Low_complexity Low_complexity 1 35 0 4 680 25 31 0 0 chr3R 12480786 12480818 -15424235 + AT_rich Low_complexity Low_complexity 1 32 0 4 680 842 111 0 31 chr3R 12481511 12481641 -15423412 - DNAREP1_DM LINE Penelope -466 128 3 4 680 21 57 0 0 chr3R 12483048 12483083 -15421970 + AT_rich Low_complexity Low_complexity 1 35 0 4 680 234 62 0 0 chr3R 12484519 12484551 -15420502 + (CCG)n Simple_repeat Simple_repeat 2 33 0 4 680 200 220 17 0 chr3R 12490333 12490392 -15414661 + (CAGAGA)n Simple_repeat Simple_repeat 4 63 0 4 680 225 119 0 0 chr3R 12492081 12492123 -15412930 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 680 180 77 0 0 chr3R 12493564 12493590 -15411463 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 680 189 0 0 0 chr3R 12495190 12495211 -15409842 + (CAGAC)n Simple_repeat Simple_repeat 3 23 0 4 680 226 203 0 63 chr3R 12495396 12495459 -15409594 + (CCCCAG)n Simple_repeat Simple_repeat 1 59 0 4 680 180 0 0 0 chr3R 12496489 12496509 -15408544 + (A)n Simple_repeat Simple_repeat 1 20 0 4 680 230 81 0 26 chr3R 12497005 12497043 -15408010 + (TTCGGG)n Simple_repeat Simple_repeat 3 39 0 4 680 192 216 0 0 chr3R 12499470 12499521 -15405532 + G-rich Low_complexity Low_complexity 5 55 0 4 680 33 0 0 0 chr3R 12499863 12499896 -15405157 + AT_rich Low_complexity Low_complexity 1 33 0 4 680 22 0 0 0 chr3R 12503194 12503216 -15401837 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 22 0 0 0 chr3R 12503440 12503462 -15401591 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 27 0 0 0 chr3R 12506518 12506545 -15398508 + AT_rich Low_complexity Low_complexity 1 27 0 4 680 207 0 0 0 chr3R 12506907 12506930 -15398123 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 680 22 0 0 0 chr3R 12508224 12508246 -15396807 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 216 0 0 0 chr3R 12509829 12509853 -15395200 + (A)n Simple_repeat Simple_repeat 1 24 0 4 680 201 162 0 26 chr3R 12511635 12511673 -15393380 + (CAG)n Simple_repeat Simple_repeat 2 38 0 4 680 227 133 0 22 chr3R 12511935 12511981 -15393072 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 680 200 204 18 36 chr3R 12512346 12512402 -15392651 + A-rich Low_complexity Low_complexity 2 56 0 4 680 22 35 0 0 chr3R 12512554 12512583 -15392470 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 210 167 0 0 chr3R 12513546 12513582 -15391471 + T-rich Low_complexity Low_complexity 1 36 0 4 680 24 0 0 0 chr3R 12514596 12514620 -15390433 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 216 158 0 0 chr3R 12521312 12521350 -15383703 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4 680 182 91 30 0 chr3R 12522120 12522153 -15382900 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 680 26 50 0 0 chr3R 12523124 12523164 -15381889 + AT_rich Low_complexity Low_complexity 1 40 0 4 680 25 0 0 0 chr3R 12524850 12524875 -15380178 + AT_rich Low_complexity Low_complexity 1 25 0 4 680 29 0 0 0 chr3R 12529250 12529279 -15375774 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 42 20 0 0 chr3R 12530618 12530667 -15374386 + AT_rich Low_complexity Low_complexity 1 49 0 4 680 21 36 0 0 chr3R 12531765 12531793 -15373260 + AT_rich Low_complexity Low_complexity 1 28 0 4 680 24 0 0 0 chr3R 12534324 12534348 -15370705 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 204 156 0 22 chr3R 12536423 12536469 -15368584 + (TAA)n Simple_repeat Simple_repeat 1 45 0 4 680 25 51 0 0 chr3R 12536478 12536517 -15368536 + AT_rich Low_complexity Low_complexity 1 39 0 4 680 180 0 0 0 chr3R 12536522 12536542 -15368511 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 4 680 23 33 0 0 chr3R 12537397 12537427 -15367626 + AT_rich Low_complexity Low_complexity 1 30 0 4 680 21 36 0 0 chr3R 12538772 12538800 -15366253 + AT_rich Low_complexity Low_complexity 1 28 0 4 680 209 149 43 0 chr3R 12539458 12539505 -15365548 + (TATG)n Simple_repeat Simple_repeat 2 50 0 4 680 234 0 0 0 chr3R 12539968 12539994 -15365059 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 680 22 0 0 0 chr3R 12540421 12540443 -15364610 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 243 61 0 0 chr3R 12541631 12541664 -15363389 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 680 21 36 0 0 chr3R 12542824 12542852 -15362201 + AT_rich Low_complexity Low_complexity 1 28 0 4 680 227 196 0 0 chr3R 12544411 12544457 -15360596 + CT-rich Low_complexity Low_complexity 1 46 0 4 680 189 182 0 0 chr3R 12544813 12544868 -15360185 + (CAATC)n Simple_repeat Simple_repeat 2 56 0 4 680 24 0 0 0 chr3R 12545332 12545356 -15359697 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 21 57 0 0 chr3R 12547138 12547173 -15357880 + AT_rich Low_complexity Low_complexity 1 35 0 4 680 215 140 51 34 chr3R 12548684 12548743 -15356310 + A-rich Low_complexity Low_complexity 2 61 0 4 680 33 25 0 0 chr3R 12550316 12550356 -15354697 + AT_rich Low_complexity Low_complexity 1 40 0 4 680 25 65 0 0 chr3R 12551392 12551438 -15353615 + AT_rich Low_complexity Low_complexity 1 46 0 4 680 22 0 0 0 chr3R 12551976 12551998 -15353055 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 225 0 0 0 chr3R 12552396 12552421 -15352632 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 680 29 47 0 0 chr3R 12553659 12553702 -15351351 + AT_rich Low_complexity Low_complexity 1 43 0 4 680 38 51 0 0 chr3R 12554525 12554584 -15350469 + AT_rich Low_complexity Low_complexity 1 59 0 4 680 222 118 0 0 chr3R 12554771 12554805 -15350248 + (TTG)n Simple_repeat Simple_repeat 1 34 0 4 680 24 0 0 0 chr3R 12555801 12555825 -15349228 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 23 86 0 0 chr3R 12557012 12557070 -15347983 + AT_rich Low_complexity Low_complexity 1 58 0 4 680 22 0 0 0 chr3R 12557650 12557672 -15347381 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 36 23 0 0 chr3R 12557906 12557949 -15347104 + AT_rich Low_complexity Low_complexity 1 43 0 4 680 208 317 0 0 chr3R 12558590 12558650 -15346403 + (CCG)n Simple_repeat Simple_repeat 3 62 0 4 680 213 132 0 0 chr3R 12558817 12558855 -15346198 + (CCG)n Simple_repeat Simple_repeat 2 39 0 4 680 24 0 0 0 chr3R 12559376 12559400 -15345653 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 27 0 0 0 chr3R 12559544 12559571 -15345482 + AT_rich Low_complexity Low_complexity 1 27 0 4 680 207 170 0 0 chr3R 12559851 12559898 -15345155 + (TTA)n Simple_repeat Simple_repeat 3 49 0 4 680 21 0 0 0 chr3R 12560660 12560681 -15344372 + AT_rich Low_complexity Low_complexity 1 21 0 4 680 23 68 0 0 chr3R 12560875 12560919 -15344134 + AT_rich Low_complexity Low_complexity 1 44 0 4 680 204 40 0 0 chr3R 12561458 12561483 -15343570 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 680 243 88 0 0 chr3R 12564496 12564530 -15340523 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 4 680 237 239 14 14 chr3R 12564717 12564789 -15340264 + ROO_I LTR Pao 664 735 -7521 4 680 30 45 0 0 chr3R 12565335 12565379 -15339674 + AT_rich Low_complexity Low_complexity 1 44 0 4 680 49 0 0 0 chr3R 12567807 12567856 -15337197 + AT_rich Low_complexity Low_complexity 1 49 0 4 680 21 0 0 0 chr3R 12568590 12568611 -15336442 + AT_rich Low_complexity Low_complexity 1 21 0 4 680 38 0 0 0 chr3R 12572460 12572498 -15332555 + AT_rich Low_complexity Low_complexity 1 38 0 4 680 200 276 0 0 chr3R 12572789 12572847 -15332206 + (CAGAGA)n Simple_repeat Simple_repeat 6 63 0 4 680 39 0 0 0 chr3R 12573912 12573951 -15331102 + AT_rich Low_complexity Low_complexity 1 39 0 4 680 29 70 0 0 chr3R 12574208 12574265 -15330788 + AT_rich Low_complexity Low_complexity 1 57 0 4 680 23 33 0 0 chr3R 12576429 12576459 -15328594 + AT_rich Low_complexity Low_complexity 1 30 0 4 680 22 35 0 0 chr3R 12579698 12579727 -15325326 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 23 33 0 0 chr3R 12580261 12580291 -15324762 + AT_rich Low_complexity Low_complexity 1 30 0 4 680 22 0 0 0 chr3R 12580726 12580748 -15324305 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 22 35 0 0 chr3R 12581573 12581602 -15323451 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 2053 5 0 0 chr3R 12582117 12582341 -15322712 - DIVER_LTR LTR Pao 0 224 1 4 10 52742 2 0 0 chr3R 12582341 12587984 -15317069 - DIVER_I LTR Pao 0 5643 1 4 681 2053 5 0 0 chr3R 12588005 12588229 -15316824 - DIVER_LTR LTR Pao 0 224 1 4 681 22 56 0 0 chr3R 12588492 12588528 -15316525 + AT_rich Low_complexity Low_complexity 1 36 0 4 681 45 75 0 0 chr3R 12588720 12588814 -15316239 + AT_rich Low_complexity Low_complexity 1 94 0 4 681 44 35 0 0 chr3R 12590521 12590579 -15314474 + AT_rich Low_complexity Low_complexity 1 58 0 4 681 26 0 0 0 chr3R 12590623 12590649 -15314404 + AT_rich Low_complexity Low_complexity 1 26 0 4 681 30 0 0 0 chr3R 12590664 12590694 -15314359 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 21 36 0 0 chr3R 12592435 12592463 -15312590 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 32 0 0 0 chr3R 12597445 12597477 -15307576 + AT_rich Low_complexity Low_complexity 1 32 0 4 681 30 0 0 0 chr3R 12597532 12597562 -15307491 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 23 0 0 0 chr3R 12601563 12601586 -15303467 + AT_rich Low_complexity Low_complexity 1 23 0 4 681 30 45 0 0 chr3R 12602706 12602750 -15302303 + AT_rich Low_complexity Low_complexity 1 44 0 4 681 201 39 0 0 chr3R 12605631 12605657 -15299396 + (TTATA)n Simple_repeat Simple_repeat 2 27 0 4 681 196 91 0 43 chr3R 12609870 12609916 -15295137 + (CCCA)n Simple_repeat Simple_repeat 1 44 0 4 681 28 61 0 0 chr3R 12610405 12610454 -15294599 + AT_rich Low_complexity Low_complexity 1 49 0 4 681 22 0 0 0 chr3R 12614049 12614071 -15290982 + AT_rich Low_complexity Low_complexity 1 22 0 4 681 29 70 0 0 chr3R 12619142 12619199 -15285854 + AT_rich Low_complexity Low_complexity 1 57 0 4 681 22 56 0 0 chr3R 12622045 12622081 -15282972 + AT_rich Low_complexity Low_complexity 1 36 0 4 681 246 62 0 0 chr3R 12626535 12626567 -15278486 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 681 23 33 0 0 chr3R 12629697 12629727 -15275326 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 25 0 0 0 chr3R 12631711 12631736 -15273317 + AT_rich Low_complexity Low_complexity 1 25 0 4 681 218 290 19 9 chr3R 12633797 12633905 -15271148 + (TA)n Simple_repeat Simple_repeat 2 110 0 4 681 477 127 0 0 chr3R 12635627 12635706 -15269347 + (CTG)n Simple_repeat Simple_repeat 3 81 0 4 681 21 57 0 0 chr3R 12637267 12637302 -15267751 + AT_rich Low_complexity Low_complexity 1 35 0 4 681 30 27 0 0 chr3R 12640654 12640691 -15264362 + AT_rich Low_complexity Low_complexity 1 37 0 4 681 208 286 0 0 chr3R 12641529 12641592 -15263461 + GA-rich Low_complexity Low_complexity 2 64 0 4 681 26 30 0 0 chr3R 12645131 12645164 -15259889 + AT_rich Low_complexity Low_complexity 1 33 0 4 681 32 0 0 0 chr3R 12645745 12645777 -15259276 + AT_rich Low_complexity Low_complexity 1 32 0 4 681 21 36 0 0 chr3R 12646942 12646970 -15258083 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 259 260 0 0 chr3R 12652976 12653049 -15252004 + (CGG)n Simple_repeat Simple_repeat 3 75 0 4 681 180 200 0 0 chr3R 12653282 12653342 -15251711 + (CTG)n Simple_repeat Simple_repeat 3 62 0 4 681 276 135 29 86 chr3R 12653460 12653565 -15251488 - ROO_I LTR Pao -7518 738 640 4 681 205 240 0 0 chr3R 12653575 12653625 -15251428 + (CGG)n Simple_repeat Simple_repeat 2 51 0 4 681 21 0 0 0 chr3R 12655457 12655478 -15249575 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 203 179 0 0 chr3R 12655631 12655670 -15249383 + T-rich Low_complexity Low_complexity 1 39 0 4 681 23 33 0 0 chr3R 12656845 12656875 -15248178 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 23 33 0 0 chr3R 12659513 12659543 -15245510 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 21 36 0 0 chr3R 12659705 12659733 -15245320 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 21 0 0 0 chr3R 12659757 12659778 -15245275 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 30 27 0 0 chr3R 12660827 12660864 -15244189 + AT_rich Low_complexity Low_complexity 1 37 0 4 681 27 29 0 0 chr3R 12661236 12661270 -15243783 + AT_rich Low_complexity Low_complexity 1 34 0 4 681 27 73 0 0 chr3R 12663701 12663756 -15241297 + AT_rich Low_complexity Low_complexity 1 55 0 4 681 23 68 0 0 chr3R 12664367 12664411 -15240642 + AT_rich Low_complexity Low_complexity 1 44 0 4 681 25 65 0 0 chr3R 12664433 12664479 -15240574 + AT_rich Low_complexity Low_complexity 1 46 0 4 681 27 0 0 0 chr3R 12670791 12670818 -15234235 + AT_rich Low_complexity Low_complexity 1 27 0 4 681 24 67 0 0 chr3R 12672363 12672408 -15232645 + AT_rich Low_complexity Low_complexity 1 45 0 4 681 260 231 20 90 chr3R 12673337 12673437 -15231616 - ROO_I LTR Pao -7512 744 652 4 681 32 26 0 0 chr3R 12682162 12682201 -15222852 + AT_rich Low_complexity Low_complexity 1 39 0 4 681 34 42 0 0 chr3R 12682650 12682698 -15222355 + AT_rich Low_complexity Low_complexity 1 48 0 4 681 23 33 0 0 chr3R 12682814 12682844 -15222209 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 207 267 17 0 chr3R 12683489 12683549 -15221504 + CT-rich Low_complexity Low_complexity 1 61 0 4 681 180 0 0 0 chr3R 12685402 12685422 -15219631 + (CATTC)n Simple_repeat Simple_repeat 2 21 0 4 681 21 0 0 0 chr3R 12688453 12688474 -15216579 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 24 32 0 0 chr3R 12688824 12688855 -15216198 + AT_rich Low_complexity Low_complexity 1 31 0 4 681 26 30 0 0 chr3R 12689018 12689051 -15216002 + AT_rich Low_complexity Low_complexity 1 33 0 4 681 26 30 0 0 chr3R 12694928 12694961 -15210092 + AT_rich Low_complexity Low_complexity 1 33 0 4 681 25 0 0 0 chr3R 12695004 12695029 -15210024 + AT_rich Low_complexity Low_complexity 1 25 0 4 681 24 0 0 0 chr3R 12696217 12696241 -15208812 + AT_rich Low_complexity Low_complexity 1 24 0 4 681 23 33 0 0 chr3R 12696299 12696329 -15208724 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 29 47 0 0 chr3R 12701803 12701846 -15203207 + AT_rich Low_complexity Low_complexity 1 43 0 4 681 23 0 0 0 chr3R 12702814 12702837 -15202216 + AT_rich Low_complexity Low_complexity 1 23 0 4 681 21 0 0 0 chr3R 12703944 12703965 -15201088 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 37 0 0 0 chr3R 12705996 12706033 -15199020 + AT_rich Low_complexity Low_complexity 1 37 0 4 681 37 39 0 0 chr3R 12707927 12707978 -15197075 + AT_rich Low_complexity Low_complexity 1 51 0 4 681 22 0 0 0 chr3R 12710266 12710288 -15194765 + AT_rich Low_complexity Low_complexity 1 22 0 4 681 22 35 0 0 chr3R 12711789 12711818 -15193235 + AT_rich Low_complexity Low_complexity 1 29 0 4 681 33 43 0 0 chr3R 12712594 12712641 -15192412 + AT_rich Low_complexity Low_complexity 1 47 0 4 681 26 0 0 0 chr3R 12713910 12713936 -15191117 + AT_rich Low_complexity Low_complexity 1 26 0 4 682 28 0 0 0 chr3R 12717541 12717569 -15187484 + AT_rich Low_complexity Low_complexity 1 28 0 4 682 189 0 0 0 chr3R 12718029 12718050 -15187003 + (TATG)n Simple_repeat Simple_repeat 4 24 0 4 682 24 111 0 0 chr3R 12718882 12718990 -15186063 + AT_rich Low_complexity Low_complexity 1 108 0 4 682 28 29 0 0 chr3R 12722317 12722352 -15182701 + AT_rich Low_complexity Low_complexity 1 35 0 4 682 22 0 0 0 chr3R 12723631 12723653 -15181400 + AT_rich Low_complexity Low_complexity 1 22 0 4 682 201 171 0 0 chr3R 12724509 12724544 -15180509 + A-rich Low_complexity Low_complexity 1 35 0 4 682 25 31 0 0 chr3R 12725061 12725093 -15179960 + AT_rich Low_complexity Low_complexity 1 32 0 4 682 28 61 0 0 chr3R 12725143 12725192 -15179861 + AT_rich Low_complexity Low_complexity 1 49 0 4 682 23 0 0 0 chr3R 12730355 12730378 -15174675 + AT_rich Low_complexity Low_complexity 1 23 0 4 682 192 111 0 0 chr3R 12731788 12731824 -15173229 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 682 246 62 0 0 chr3R 12732301 12732333 -15172720 + (CATA)n Simple_repeat Simple_repeat 4 35 0 4 682 192 97 0 0 chr3R 12734085 12734116 -15170937 + (T)n Simple_repeat Simple_repeat 1 31 0 4 682 180 179 0 0 chr3R 12735411 12735450 -15169603 + (TCCG)n Simple_repeat Simple_repeat 1 39 0 4 682 23 0 0 0 chr3R 12737852 12737875 -15167178 + AT_rich Low_complexity Low_complexity 1 23 0 4 682 28 71 0 0 chr3R 12739127 12739183 -15165870 + AT_rich Low_complexity Low_complexity 1 56 0 4 682 218 180 0 39 chr3R 12741574 12741626 -15163427 + T-rich Low_complexity Low_complexity 5 54 0 4 682 23 33 0 0 chr3R 12743269 12743299 -15161754 + AT_rich Low_complexity Low_complexity 1 30 0 4 682 343 233 163 0 chr3R 12750401 12750487 -15154566 - DNAREP1_DM LINE Penelope -64 530 431 4 682 27 49 0 0 chr3R 12751089 12751130 -15153923 + AT_rich Low_complexity Low_complexity 1 41 0 4 682 35 54 0 0 chr3R 12751205 12751261 -15153792 + AT_rich Low_complexity Low_complexity 1 56 0 4 682 33 43 0 0 chr3R 12752502 12752549 -15152504 + AT_rich Low_complexity Low_complexity 1 47 0 4 682 31 76 0 0 chr3R 12756673 12756739 -15148314 + AT_rich Low_complexity Low_complexity 1 66 0 4 682 24 0 0 0 chr3R 12757690 12757714 -15147339 + AT_rich Low_complexity Low_complexity 1 24 0 4 682 279 140 0 0 chr3R 12758356 12758406 -15146647 + (CTG)n Simple_repeat Simple_repeat 3 52 0 4 682 201 74 0 0 chr3R 12758559 12758586 -15146467 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 682 465 115 0 0 chr3R 12758664 12758751 -15146302 + (CTG)n Simple_repeat Simple_repeat 3 89 0 4 682 24 0 0 0 chr3R 12759110 12759134 -15145919 + AT_rich Low_complexity Low_complexity 1 24 0 4 682 351 0 0 0 chr3R 12760096 12760135 -15144918 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 682 186 43 0 0 chr3R 12763553 12763576 -15141477 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 4 682 180 0 0 0 chr3R 12765064 12765084 -15139969 + (T)n Simple_repeat Simple_repeat 1 20 0 4 682 206 238 16 16 chr3R 12767426 12767490 -15137563 + (TCCG)n Simple_repeat Simple_repeat 2 65 0 4 682 27 0 0 0 chr3R 12769430 12769457 -15135596 + AT_rich Low_complexity Low_complexity 1 27 0 4 682 21 0 0 0 chr3R 12770834 12770855 -15134198 + AT_rich Low_complexity Low_complexity 1 21 0 4 682 24 0 0 0 chr3R 12773248 12773272 -15131781 + AT_rich Low_complexity Low_complexity 1 24 0 4 682 243 103 0 0 chr3R 12775755 12775794 -15129259 + (CAA)n Simple_repeat Simple_repeat 3 41 0 4 682 26 50 0 0 chr3R 12776075 12776115 -15128938 + AT_rich Low_complexity Low_complexity 1 40 0 4 682 21 0 0 0 chr3R 12777870 12777891 -15127162 + AT_rich Low_complexity Low_complexity 1 21 0 4 682 22 0 0 0 chr3R 12779617 12779639 -15125414 + AT_rich Low_complexity Low_complexity 1 22 0 4 682 23 0 0 0 chr3R 12779818 12779841 -15125212 + AT_rich Low_complexity Low_complexity 1 23 0 4 682 27 0 0 0 chr3R 12779873 12779900 -15125153 + AT_rich Low_complexity Low_complexity 1 27 0 4 682 180 97 0 0 chr3R 12780119 12780150 -15124903 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 4 682 26 30 0 0 chr3R 12783846 12783879 -15121174 + AT_rich Low_complexity Low_complexity 1 33 0 4 682 33 0 0 0 chr3R 12784087 12784120 -15120933 + AT_rich Low_complexity Low_complexity 1 33 0 5 682 25 0 0 0 chr3R 12786811 12786836 -15118217 + AT_rich Low_complexity Low_complexity 1 25 0 5 682 22 0 0 0 chr3R 12790108 12790130 -15114923 + AT_rich Low_complexity Low_complexity 1 22 0 5 682 209 89 0 62 chr3R 12793161 12793209 -15111844 + (GATTG)n Simple_repeat Simple_repeat 1 45 0 5 682 227 178 0 0 chr3R 12793360 12793405 -15111648 + (TTTCG)n Simple_repeat Simple_repeat 1 45 0 5 682 244 118 0 0 chr3R 12794401 12794435 -15110618 + Gypsy4_I LTR Gypsy 3569 3602 -2686 5 682 29 0 0 0 chr3R 12794751 12794780 -15110273 + AT_rich Low_complexity Low_complexity 1 29 0 5 682 22 0 0 0 chr3R 12796461 12796483 -15108570 + AT_rich Low_complexity Low_complexity 1 22 0 5 682 26 30 0 0 chr3R 12796560 12796593 -15108460 + AT_rich Low_complexity Low_complexity 1 33 0 5 682 30 45 0 0 chr3R 12796962 12797006 -15108047 + AT_rich Low_complexity Low_complexity 1 44 0 5 682 22 70 0 0 chr3R 12797324 12797367 -15107686 + AT_rich Low_complexity Low_complexity 1 43 0 5 682 25 0 0 0 chr3R 12799737 12799762 -15105291 + AT_rich Low_complexity Low_complexity 1 25 0 5 682 24 77 0 0 chr3R 12803669 12803721 -15101332 + AT_rich Low_complexity Low_complexity 1 52 0 5 682 40 21 0 0 chr3R 12803929 12803976 -15101077 + AT_rich Low_complexity Low_complexity 1 47 0 5 682 25 51 0 0 chr3R 12803990 12804029 -15101024 + AT_rich Low_complexity Low_complexity 1 39 0 5 682 25 65 0 0 chr3R 12806091 12806137 -15098916 + AT_rich Low_complexity Low_complexity 1 46 0 5 682 198 0 0 0 chr3R 12807333 12807355 -15097698 + (TATG)n Simple_repeat Simple_repeat 3 24 0 5 682 34 0 0 0 chr3R 12810014 12810048 -15095005 + AT_rich Low_complexity Low_complexity 1 34 0 5 682 21 0 0 0 chr3R 12811104 12811125 -15093928 + AT_rich Low_complexity Low_complexity 1 21 0 5 682 228 67 0 0 chr3R 12812599 12812629 -15092424 + (TATG)n Simple_repeat Simple_repeat 1 30 0 5 682 198 143 0 0 chr3R 12813350 12813385 -15091668 + (ATTCG)n Simple_repeat Simple_repeat 4 38 0 5 682 239 235 99 0 chr3R 12817667 12817748 -15087305 - DNAREP1_DM LINE Penelope -10 584 496 5 682 867 263 29 25 chr3R 12817757 12818038 -15087015 - DMCR1A LINE CR1 -996 3474 3193 5 682 56 0 0 0 chr3R 12832230 12832286 -15072767 + AT_rich Low_complexity Low_complexity 1 56 0 5 682 25 65 0 0 chr3R 12837567 12837613 -15067440 + AT_rich Low_complexity Low_complexity 1 46 0 5 683 23 0 0 0 chr3R 12852673 12852696 -15052357 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 24 0 0 0 chr3R 12853315 12853339 -15051714 + AT_rich Low_complexity Low_complexity 1 24 0 5 683 180 125 0 0 chr3R 12854654 12854686 -15050367 + (CCG)n Simple_repeat Simple_repeat 2 33 0 5 683 323 160 0 13 chr3R 12854927 12855003 -15050050 + (CCA)n Simple_repeat Simple_repeat 3 77 0 5 683 285 89 0 0 chr3R 12855309 12855354 -15049699 + (CCA)n Simple_repeat Simple_repeat 1 45 0 5 683 22 35 0 0 chr3R 12856501 12856530 -15048523 + AT_rich Low_complexity Low_complexity 1 29 0 5 683 26 0 0 0 chr3R 12859643 12859669 -15045384 + AT_rich Low_complexity Low_complexity 1 26 0 5 683 21 0 0 0 chr3R 12860458 12860479 -15044574 + AT_rich Low_complexity Low_complexity 1 21 0 5 683 30 0 0 0 chr3R 12864920 12864950 -15040103 + AT_rich Low_complexity Low_complexity 1 30 0 5 683 41 21 0 0 chr3R 12865976 12866024 -15039029 + AT_rich Low_complexity Low_complexity 1 48 0 5 683 34 24 0 0 chr3R 12866161 12866202 -15038851 + AT_rich Low_complexity Low_complexity 1 41 0 5 683 31 68 0 0 chr3R 12867578 12867637 -15037416 + AT_rich Low_complexity Low_complexity 1 59 0 5 683 23 0 0 0 chr3R 12869153 12869176 -15035877 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 256 194 45 0 chr3R 12870314 12870381 -15034672 + ROO_I LTR Pao 664 733 -7523 5 683 27 29 0 0 chr3R 12874780 12874814 -15030239 + AT_rich Low_complexity Low_complexity 1 34 0 5 683 28 0 0 0 chr3R 12874873 12874901 -15030152 + AT_rich Low_complexity Low_complexity 1 28 0 5 683 23 0 0 0 chr3R 12881054 12881077 -15023976 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 26 50 0 0 chr3R 12886015 12886055 -15018998 + AT_rich Low_complexity Low_complexity 1 40 0 5 683 26 0 0 0 chr3R 12893374 12893400 -15011653 + AT_rich Low_complexity Low_complexity 1 26 0 5 683 278 50 0 24 chr3R 12895234 12895275 -15009778 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 683 191 80 77 39 chr3R 12902673 12902751 -15002302 + (TTAA)n Simple_repeat Simple_repeat 2 82 0 5 683 25 31 0 0 chr3R 12904608 12904640 -15000413 + AT_rich Low_complexity Low_complexity 1 32 0 5 683 24 0 0 0 chr3R 12905831 12905855 -14999198 + AT_rich Low_complexity Low_complexity 1 24 0 5 683 45 19 0 0 chr3R 12911140 12911192 -14993861 + AT_rich Low_complexity Low_complexity 1 52 0 5 683 183 139 0 0 chr3R 12912732 12912768 -14992285 + (CAA)n Simple_repeat Simple_repeat 3 38 0 5 683 202 192 19 19 chr3R 12913807 12913860 -14991193 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 5 683 49 0 0 0 chr3R 12920512 12920561 -14984492 + AT_rich Low_complexity Low_complexity 1 49 0 5 683 200 158 52 17 chr3R 12923034 12923092 -14981961 + (TTATA)n Simple_repeat Simple_repeat 3 62 0 5 683 195 139 0 0 chr3R 12925821 12925857 -14979196 + (CCTAG)n Simple_repeat Simple_repeat 5 40 0 5 683 25 0 0 0 chr3R 12926651 12926676 -14978377 + AT_rich Low_complexity Low_complexity 1 25 0 5 683 22 0 0 0 chr3R 12935466 12935488 -14969565 + AT_rich Low_complexity Low_complexity 1 22 0 5 683 231 280 0 0 chr3R 12940503 12940578 -14964475 + T-rich Low_complexity Low_complexity 1 75 0 5 683 189 0 0 0 chr3R 12944437 12944458 -14960595 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 683 241 250 0 0 chr3R 12944619 12944675 -14960378 + (TTG)n Simple_repeat Simple_repeat 1 56 0 5 683 210 219 30 30 chr3R 12945194 12945260 -14959793 + T-rich Low_complexity Low_complexity 3 68 0 5 683 268 118 137 0 chr3R 12946635 12946686 -14958367 + DNAREP1_DM LINE Penelope 1 58 -536 5 683 313 272 11 0 chr3R 12946681 12946773 -14958280 + DNAREP1_DM LINE Penelope 292 384 -210 5 683 206 105 0 26 chr3R 12946774 12946813 -14958240 + (TAA)n Simple_repeat Simple_repeat 1 38 0 5 683 384 207 0 0 chr3R 12946862 12946949 -14958104 + DNAREP1_DM LINE Penelope 508 594 0 5 683 23 33 0 0 chr3R 12947022 12947052 -14958001 + AT_rich Low_complexity Low_complexity 1 30 0 5 683 23 0 0 0 chr3R 12951771 12951794 -14953259 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 21 36 0 0 chr3R 12966919 12966947 -14938106 + AT_rich Low_complexity Low_complexity 1 28 0 5 683 244 261 11 11 chr3R 12967778 12967867 -14937186 + (CTG)n Simple_repeat Simple_repeat 1 89 0 5 683 22 0 0 0 chr3R 12968442 12968464 -14936589 + AT_rich Low_complexity Low_complexity 1 22 0 5 683 23 0 0 0 chr3R 12969921 12969944 -14935109 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 22 35 0 0 chr3R 12971036 12971065 -14933988 + AT_rich Low_complexity Low_complexity 1 29 0 5 683 243 0 0 0 chr3R 12973717 12973744 -14931309 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 684 186 43 0 0 chr3R 12986340 12986363 -14918690 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 684 195 167 0 0 chr3R 12987505 12987547 -14917506 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 684 22 35 0 0 chr3R 12989200 12989229 -14915824 + AT_rich Low_complexity Low_complexity 1 29 0 5 684 234 0 0 0 chr3R 12991956 12991982 -14913071 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 684 21 36 0 0 chr3R 12993172 12993200 -14911853 + AT_rich Low_complexity Low_complexity 1 28 0 5 684 23 54 0 0 chr3R 12994657 12994694 -14910359 + AT_rich Low_complexity Low_complexity 1 37 0 5 684 206 245 0 20 chr3R 12994836 12994886 -14910167 + (TATG)n Simple_repeat Simple_repeat 4 52 0 5 684 24 0 0 0 chr3R 12998785 12998809 -14906244 + AT_rich Low_complexity Low_complexity 1 24 0 5 684 32 57 0 0 chr3R 13002033 13002086 -14902967 + AT_rich Low_complexity Low_complexity 1 53 0 5 684 24 0 0 0 chr3R 13004921 13004945 -14900108 + AT_rich Low_complexity Low_complexity 1 24 0 5 684 26 82 0 0 chr3R 13010376 13010437 -14894616 + AT_rich Low_complexity Low_complexity 1 61 0 5 684 22 0 0 0 chr3R 13011955 13011977 -14893076 + AT_rich Low_complexity Low_complexity 1 22 0 5 684 23 0 0 0 chr3R 13012971 13012994 -14892059 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 22 35 0 0 chr3R 13018596 13018625 -14886428 + AT_rich Low_complexity Low_complexity 1 29 0 5 684 180 97 0 0 chr3R 13019978 13020009 -14885044 + (TTCGG)n Simple_repeat Simple_repeat 4 34 0 5 684 227 179 15 0 chr3R 13024926 13024993 -14880060 + (TTTG)n Simple_repeat Simple_repeat 1 68 0 5 684 28 29 0 0 chr3R 13027460 13027495 -14877558 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 25 51 0 0 chr3R 13028288 13028327 -14876726 + AT_rich Low_complexity Low_complexity 1 39 0 5 684 22 35 0 0 chr3R 13030375 13030404 -14874649 + AT_rich Low_complexity Low_complexity 1 29 0 5 684 23 0 0 0 chr3R 13032669 13032692 -14872361 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 23 0 0 0 chr3R 13034446 13034469 -14870584 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 28 29 0 0 chr3R 13034558 13034593 -14870460 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 21 0 0 0 chr3R 13035338 13035359 -14869694 + AT_rich Low_complexity Low_complexity 1 21 0 5 684 24 0 0 0 chr3R 13036595 13036619 -14868434 + AT_rich Low_complexity Low_complexity 1 24 0 5 684 27 62 0 0 chr3R 13036711 13036759 -14868294 + AT_rich Low_complexity Low_complexity 1 48 0 5 684 28 0 0 0 chr3R 13037369 13037397 -14867656 + AT_rich Low_complexity Low_complexity 1 28 0 5 684 22 0 0 0 chr3R 13038681 13038703 -14866350 + AT_rich Low_complexity Low_complexity 1 22 0 5 684 198 156 0 0 chr3R 13039612 13039657 -14865396 + A-rich Low_complexity Low_complexity 4 48 0 5 684 23 0 0 0 chr3R 13040300 13040323 -14864730 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 207 164 0 68 chr3R 13041705 13041764 -14863289 + T-rich Low_complexity Low_complexity 4 58 0 5 684 24 32 0 0 chr3R 13045185 13045216 -14859837 + AT_rich Low_complexity Low_complexity 1 31 0 5 684 23 54 0 0 chr3R 13045572 13045609 -14859444 + AT_rich Low_complexity Low_complexity 1 37 0 5 684 207 186 13 67 chr3R 13047738 13047813 -14857240 + A-rich Low_complexity Low_complexity 2 72 0 5 684 246 62 0 0 chr3R 13053044 13053076 -14851977 + (CTG)n Simple_repeat Simple_repeat 1 32 0 5 684 23 0 0 0 chr3R 13053265 13053288 -14851765 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 208 232 11 58 chr3R 13057927 13058014 -14847039 + T-rich Low_complexity Low_complexity 5 87 0 5 684 26 0 0 0 chr3R 13058690 13058716 -14846337 + AT_rich Low_complexity Low_complexity 1 26 0 5 684 28 29 0 0 chr3R 13061458 13061493 -14843560 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 216 196 0 0 chr3R 13064779 13064825 -14840228 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 5 684 216 111 0 0 chr3R 13069091 13069127 -14835926 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 684 21 36 0 0 chr3R 13069713 13069741 -14835312 + AT_rich Low_complexity Low_complexity 1 28 0 5 684 35 0 0 0 chr3R 13071502 13071537 -14833516 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 192 135 0 0 chr3R 13073185 13073222 -14831831 + (CTG)n Simple_repeat Simple_repeat 2 38 0 5 684 227 271 0 28 chr3R 13073609 13073681 -14831372 + (CTG)n Simple_repeat Simple_repeat 2 71 0 5 684 23 0 0 0 chr3R 13075825 13075848 -14829205 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 24 32 0 0 chr3R 13078167 13078198 -14826855 + AT_rich Low_complexity Low_complexity 1 31 0 5 684 21 0 0 0 chr3R 13079297 13079318 -14825735 + AT_rich Low_complexity Low_complexity 1 21 0 5 684 243 103 0 0 chr3R 13082988 13083027 -14822026 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 684 210 91 0 0 chr3R 13085179 13085212 -14819841 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 684 26 74 0 0 chr3R 13087844 13087898 -14817155 + AT_rich Low_complexity Low_complexity 1 54 0 5 684 180 0 0 0 chr3R 13090330 13090350 -14814703 + (T)n Simple_repeat Simple_repeat 1 20 0 5 684 189 0 0 0 chr3R 13090882 13090903 -14814150 + (GA)n Simple_repeat Simple_repeat 2 22 0 5 684 28 48 0 0 chr3R 13093580 13093622 -14811431 + AT_rich Low_complexity Low_complexity 1 42 0 5 684 234 172 0 45 chr3R 13095057 13095124 -14809929 + T-rich Low_complexity Low_complexity 5 68 0 5 684 36 0 0 0 chr3R 13097498 13097534 -14807519 + AT_rich Low_complexity Low_complexity 1 36 0 5 684 31 0 0 0 chr3R 13102751 13102782 -14802271 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 198 143 0 0 chr3R 13107660 13107695 -14797358 + (A)n Simple_repeat Simple_repeat 1 35 0 5 685 213 253 42 0 chr3R 13108091 13108186 -14796867 + (CA)n Simple_repeat Simple_repeat 2 100 0 5 685 186 43 0 0 chr3R 13109402 13109425 -14795628 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 685 22 0 0 0 chr3R 13111374 13111396 -14793657 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 180 77 0 0 chr3R 13111739 13111765 -14793288 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 685 25 0 0 0 chr3R 13112020 13112045 -14793008 + AT_rich Low_complexity Low_complexity 1 25 0 5 685 22 0 0 0 chr3R 13116141 13116163 -14788890 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 27 62 0 0 chr3R 13119092 13119140 -14785913 + AT_rich Low_complexity Low_complexity 1 48 0 5 685 26 50 0 0 chr3R 13119593 13119633 -14785420 + AT_rich Low_complexity Low_complexity 1 40 0 5 685 249 163 0 0 chr3R 13119643 13119692 -14785361 + (ATG)n Simple_repeat Simple_repeat 1 49 0 5 685 3246 11 0 0 chr3R 13120448 13120806 -14784247 + BS LINE Jockey 4769 5126 0 5 685 206 75 50 0 chr3R 13122046 13122086 -14782967 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5 685 342 129 0 0 chr3R 13122486 13122548 -14782505 + (CTG)n Simple_repeat Simple_repeat 1 62 0 5 685 24 32 0 0 chr3R 13122868 13122899 -14782154 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 35 24 0 0 chr3R 13125091 13125133 -14779920 + AT_rich Low_complexity Low_complexity 1 42 0 5 685 180 77 0 0 chr3R 13126707 13126733 -14778320 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 685 282 252 142 32 chr3R 13127695 13127948 -14777105 + PENELOPE LINE Penelope 3893 4008 -153 5 685 25 31 0 0 chr3R 13131903 13131935 -14773118 + AT_rich Low_complexity Low_complexity 1 32 0 5 685 22 0 0 0 chr3R 13138836 13138858 -14766195 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 25 75 0 0 chr3R 13145787 13145840 -14759213 + AT_rich Low_complexity Low_complexity 1 53 0 5 685 21 36 0 0 chr3R 13149828 13149856 -14755197 + AT_rich Low_complexity Low_complexity 1 28 0 5 685 23 54 0 0 chr3R 13152344 13152381 -14752672 + AT_rich Low_complexity Low_complexity 1 37 0 5 685 24 32 0 0 chr3R 13155969 13156000 -14749053 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 22 35 0 0 chr3R 13158523 13158552 -14746501 + AT_rich Low_complexity Low_complexity 1 29 0 5 685 189 74 0 0 chr3R 13160436 13160463 -14744590 + (CAG)n Simple_repeat Simple_repeat 2 28 0 5 685 41 21 0 0 chr3R 13163332 13163380 -14741673 + AT_rich Low_complexity Low_complexity 1 48 0 5 685 189 196 0 0 chr3R 13163828 13163874 -14741179 + (ATG)n Simple_repeat Simple_repeat 1 46 0 5 685 212 175 0 0 chr3R 13167289 13167329 -14737724 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 685 216 135 0 0 chr3R 13169849 13169886 -14735167 + (ATTCG)n Simple_repeat Simple_repeat 2 38 0 5 685 26 64 0 0 chr3R 13172269 13172316 -14732737 + AT_rich Low_complexity Low_complexity 1 47 0 5 685 11530 0 53 0 chr3R 13172465 13173957 -14731096 - FW_DM LINE Jockey -2 4690 3120 5 685 26 50 0 0 chr3R 13176094 13176134 -14728919 + AT_rich Low_complexity Low_complexity 1 40 0 5 685 39 0 0 0 chr3R 13179368 13179407 -14725646 + AT_rich Low_complexity Low_complexity 1 39 0 5 685 234 0 0 0 chr3R 13179810 13179836 -14725217 + (ATG)n Simple_repeat Simple_repeat 3 28 0 5 685 212 266 16 0 chr3R 13181802 13181866 -14723187 + A-rich Low_complexity Low_complexity 2 66 0 5 685 25 0 0 0 chr3R 13182840 13182865 -14722188 + AT_rich Low_complexity Low_complexity 1 25 0 5 685 327 49 0 0 chr3R 13185257 13185298 -14719755 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 5 685 203 274 16 0 chr3R 13188438 13188500 -14716553 + (CAA)n Simple_repeat Simple_repeat 1 63 0 5 685 237 197 0 0 chr3R 13188604 13188670 -14716383 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 685 225 222 0 36 chr3R 13190168 13190224 -14714829 + (CCCGAA)n Simple_repeat Simple_repeat 3 56 0 5 685 201 178 0 0 chr3R 13191206 13191251 -14713802 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 685 201 152 43 21 chr3R 13191686 13191733 -14713320 + T-rich Low_complexity Low_complexity 3 50 0 5 685 192 135 0 0 chr3R 13193403 13193440 -14711613 + (ACTG)n Simple_repeat Simple_repeat 4 40 0 5 685 226 220 0 0 chr3R 13194845 13194895 -14710158 + GA-rich Low_complexity Low_complexity 2 51 0 5 685 219 250 0 16 chr3R 13197430 13197491 -14707562 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 685 38 0 0 0 chr3R 13200547 13200585 -14704468 + AT_rich Low_complexity Low_complexity 1 38 0 5 685 195 100 0 0 chr3R 13200957 13200987 -14704066 + (AACTG)n Simple_repeat Simple_repeat 1 30 0 5 685 25 65 0 0 chr3R 13205016 13205062 -14699991 + AT_rich Low_complexity Low_complexity 1 46 0 5 685 21 36 0 0 chr3R 13205198 13205226 -14699827 + AT_rich Low_complexity Low_complexity 1 28 0 5 685 24 32 0 0 chr3R 13205774 13205805 -14699248 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 22 0 0 0 chr3R 13211688 13211710 -14693343 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 183 80 0 0 chr3R 13212676 13212701 -14692352 + (CAG)n Simple_repeat Simple_repeat 1 25 0 5 685 261 0 0 0 chr3R 13214880 13214909 -14690144 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 685 206 208 0 40 chr3R 13214946 13214996 -14690057 + (CATATA)n Simple_repeat Simple_repeat 3 50 0 5 685 21 36 0 0 chr3R 13216114 13216142 -14688911 + AT_rich Low_complexity Low_complexity 1 28 0 5 685 40 49 0 0 chr3R 13217416 13217477 -14687576 + AT_rich Low_complexity Low_complexity 1 61 0 5 685 22 0 0 0 chr3R 13222744 13222766 -14682287 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 186 167 0 0 chr3R 13225086 13225122 -14679931 + (CCG)n Simple_repeat Simple_repeat 2 37 0 5 685 206 116 23 0 chr3R 13228477 13228520 -14676533 + (TTAAA)n Simple_repeat Simple_repeat 3 46 0 5 685 24 32 0 0 chr3R 13229613 13229644 -14675409 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 23 0 0 0 chr3R 13230089 13230112 -14674941 + AT_rich Low_complexity Low_complexity 1 23 0 5 685 29 60 0 0 chr3R 13233228 13233278 -14671775 + AT_rich Low_complexity Low_complexity 1 50 0 5 686 26 50 0 0 chr3R 13238451 13238491 -14666562 + AT_rich Low_complexity Low_complexity 1 40 0 5 686 25 0 0 0 chr3R 13240353 13240378 -14664675 + AT_rich Low_complexity Low_complexity 1 25 0 5 686 31 26 0 0 chr3R 13240518 13240556 -14664497 + AT_rich Low_complexity Low_complexity 1 38 0 5 686 225 146 36 0 chr3R 13242214 13242269 -14662784 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 686 230 186 0 0 chr3R 13242608 13242651 -14662402 + DNAREP1_DM LINE Penelope 12 54 -540 5 686 33 43 0 0 chr3R 13242928 13242975 -14662078 + AT_rich Low_complexity Low_complexity 1 47 0 5 686 24 32 0 0 chr3R 13243726 13243757 -14661296 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 21 36 0 0 chr3R 13244366 13244394 -14660659 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 21 36 0 0 chr3R 13245146 13245174 -14659879 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 23 54 0 0 chr3R 13245853 13245890 -14659163 + AT_rich Low_complexity Low_complexity 1 37 0 5 686 40 0 0 0 chr3R 13246733 13246773 -14658280 + AT_rich Low_complexity Low_complexity 1 40 0 5 686 30 0 0 0 chr3R 13246939 13246969 -14658084 + AT_rich Low_complexity Low_complexity 1 30 0 5 686 21 57 0 0 chr3R 13252825 13252860 -14652193 + AT_rich Low_complexity Low_complexity 1 35 0 5 686 28 48 0 0 chr3R 13252982 13253024 -14652029 + AT_rich Low_complexity Low_complexity 1 42 0 5 686 31 0 0 0 chr3R 13255384 13255415 -14649638 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 22 0 0 0 chr3R 13259869 13259891 -14645162 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 21 0 0 0 chr3R 13261406 13261427 -14643626 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 22 56 0 0 chr3R 13262921 13262957 -14642096 + AT_rich Low_complexity Low_complexity 1 36 0 5 686 24 32 0 0 chr3R 13264155 13264186 -14640867 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 207 167 0 0 chr3R 13264501 13264537 -14640516 + (CTG)n Simple_repeat Simple_repeat 1 36 0 5 686 21 95 0 0 chr3R 13266786 13266849 -14638204 + AT_rich Low_complexity Low_complexity 1 63 0 5 686 24 32 0 0 chr3R 13269177 13269208 -14635845 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 24 32 0 0 chr3R 13270211 13270242 -14634811 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 22 0 0 0 chr3R 13272147 13272169 -14632884 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 29 47 0 0 chr3R 13272196 13272239 -14632814 + AT_rich Low_complexity Low_complexity 1 43 0 5 686 23 68 0 0 chr3R 13272770 13272814 -14632239 + AT_rich Low_complexity Low_complexity 1 44 0 5 686 24 0 0 0 chr3R 13272917 13272941 -14632112 + AT_rich Low_complexity Low_complexity 1 24 0 5 686 21 0 0 0 chr3R 13273668 13273689 -14631364 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 207 0 0 0 chr3R 13274714 13274737 -14630316 + (GCTG)n Simple_repeat Simple_repeat 2 24 0 5 686 33 0 0 0 chr3R 13275164 13275197 -14629856 + AT_rich Low_complexity Low_complexity 1 33 0 5 686 25 31 0 0 chr3R 13275464 13275496 -14629557 + AT_rich Low_complexity Low_complexity 1 32 0 5 686 200 111 0 27 chr3R 13279319 13279356 -14625697 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 5 686 22 35 0 0 chr3R 13279775 13279804 -14625249 + AT_rich Low_complexity Low_complexity 1 29 0 5 686 21 0 0 0 chr3R 13282112 13282133 -14622920 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 1620 0 0 0 chr3R 13282598 13282851 -14622202 + (TTA)n Simple_repeat Simple_repeat 1 253 0 5 686 21 0 0 0 chr3R 13288990 13289011 -14616042 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 234 239 0 0 chr3R 13291625 13291692 -14613361 + (CTG)n Simple_repeat Simple_repeat 2 68 0 5 686 28 0 0 0 chr3R 13291869 13291897 -14613156 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 208 222 0 0 chr3R 13293698 13293743 -14611310 + (TCCG)n Simple_repeat Simple_repeat 1 45 0 5 686 21 36 0 0 chr3R 13295392 13295420 -14609633 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 186 118 0 0 chr3R 13299359 13299393 -14605660 + (GAATG)n Simple_repeat Simple_repeat 5 38 0 5 686 25 31 0 0 chr3R 13301651 13301683 -14603370 + AT_rich Low_complexity Low_complexity 1 32 0 5 686 34 0 0 0 chr3R 13302512 13302546 -14602507 + AT_rich Low_complexity Low_complexity 1 34 0 5 686 23 33 0 0 chr3R 13303961 13303991 -14601062 + AT_rich Low_complexity Low_complexity 1 30 0 5 686 23 0 0 0 chr3R 13307066 13307089 -14597964 + AT_rich Low_complexity Low_complexity 1 23 0 5 686 21 36 0 0 chr3R 13309268 13309296 -14595757 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 180 125 0 0 chr3R 13313303 13313335 -14591718 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 5 686 21 57 0 0 chr3R 13313335 13313370 -14591683 + AT_rich Low_complexity Low_complexity 1 35 0 5 686 223 292 11 33 chr3R 13314351 13314443 -14590610 + (TA)n Simple_repeat Simple_repeat 2 91 0 5 686 294 106 0 0 chr3R 13314950 13314997 -14590056 + (AACTG)n Simple_repeat Simple_repeat 4 50 0 5 686 309 100 0 0 chr3R 13315270 13315320 -14589733 + (TCTG)n Simple_repeat Simple_repeat 1 50 0 5 686 28 29 0 0 chr3R 13318464 13318499 -14586554 + AT_rich Low_complexity Low_complexity 1 35 0 5 686 22 0 0 0 chr3R 13320950 13320972 -14584081 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 234 0 0 0 chr3R 13321514 13321540 -14583513 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 686 25 65 0 0 chr3R 13322296 13322342 -14582711 + AT_rich Low_complexity Low_complexity 1 46 0 5 686 186 71 0 0 chr3R 13324070 13324098 -14580955 + (TTTAG)n Simple_repeat Simple_repeat 3 30 0 5 686 26 0 0 0 chr3R 13328795 13328821 -14576232 + AT_rich Low_complexity Low_complexity 1 26 0 5 686 61590 2 2 10 chr3R 13334997 13342488 -14562565 + DM412 LTR Gypsy 1 6897 0 5 686 22 0 0 0 chr3R 13345033 13345055 -14559998 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 201 289 13 13 chr3R 13346020 13346097 -14558956 + (CCGGA)n Simple_repeat Simple_repeat 4 80 0 5 686 183 80 0 0 chr3R 13347265 13347290 -14557763 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 686 180 0 0 0 chr3R 13348066 13348086 -14556967 + (T)n Simple_repeat Simple_repeat 1 20 0 5 686 22 35 0 0 chr3R 13349110 13349139 -14555914 + AT_rich Low_complexity Low_complexity 1 29 0 5 686 25 31 0 0 chr3R 13351159 13351191 -14553862 + AT_rich Low_complexity Low_complexity 1 32 0 5 686 191 173 0 19 chr3R 13351715 13351768 -14553285 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 686 216 0 0 0 chr3R 13355938 13355962 -14549091 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 686 21 0 0 0 chr3R 13356346 13356367 -14548686 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 216 211 0 19 chr3R 13360056 13360109 -14544944 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 686 263 274 0 0 chr3R 13364408 13364481 -14540572 + CT-rich Low_complexity Low_complexity 1 73 0 5 686 22 0 0 0 chr3R 13368714 13368736 -14536317 + AT_rich Low_complexity Low_complexity 1 22 0 5 687 226 267 13 13 chr3R 13370568 13370644 -14534409 + (CCG)n Simple_repeat Simple_repeat 2 77 0 5 687 180 0 0 0 chr3R 13373702 13373722 -14531331 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 687 32 26 0 0 chr3R 13374591 13374630 -14530423 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 26 0 0 0 chr3R 13375115 13375141 -14529912 + AT_rich Low_complexity Low_complexity 1 26 0 5 687 242 211 0 26 chr3R 13375161 13375239 -14529814 + DNAREP1_DM LINE Penelope 212 287 -307 5 687 312 102 0 0 chr3R 13375872 13375921 -14529132 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 5 687 201 139 0 0 chr3R 13381988 13382031 -14523022 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 687 249 108 0 0 chr3R 13382168 13382205 -14522848 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 687 25 0 0 0 chr3R 13382559 13382584 -14522469 + AT_rich Low_complexity Low_complexity 1 25 0 5 687 183 80 0 0 chr3R 13383012 13383037 -14522016 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 687 256 241 0 0 chr3R 13383492 13383550 -14521503 + CT-rich Low_complexity Low_complexity 2 59 0 5 687 26 0 0 0 chr3R 13383754 13383780 -14521273 + AT_rich Low_complexity Low_complexity 1 26 0 5 687 249 183 0 0 chr3R 13384716 13384776 -14520277 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 687 21 36 0 0 chr3R 13384977 13385005 -14520048 + AT_rich Low_complexity Low_complexity 1 28 0 5 687 210 156 0 0 chr3R 13385487 13385532 -14519521 + (CAG)n Simple_repeat Simple_repeat 1 45 0 5 687 201 175 0 0 chr3R 13385656 13385696 -14519357 + (CGG)n Simple_repeat Simple_repeat 1 40 0 5 687 230 302 0 0 chr3R 13385703 13385766 -14519287 + (CAG)n Simple_repeat Simple_repeat 2 64 0 5 687 202 105 25 50 chr3R 13391587 13391627 -14513426 + (CATAT)n Simple_repeat Simple_repeat 2 40 0 5 687 205 207 0 79 chr3R 13392397 13392460 -14512593 + (CATATA)n Simple_repeat Simple_repeat 4 61 0 5 687 204 40 0 0 chr3R 13392774 13392799 -14512254 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 687 341 189 0 0 chr3R 13392957 13393047 -14512006 + ROO_I LTR Pao 634 723 -7533 5 687 276 137 0 0 chr3R 13394401 13394452 -14510601 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 687 25 31 0 0 chr3R 13394642 13394674 -14510379 + AT_rich Low_complexity Low_complexity 1 32 0 5 687 25 75 0 0 chr3R 13394769 13394822 -14510231 + AT_rich Low_complexity Low_complexity 1 53 0 5 687 209 196 0 0 chr3R 13397131 13397177 -14507876 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 687 54 84 0 0 chr3R 13399469 13399600 -14505453 + AT_rich Low_complexity Low_complexity 1 131 0 5 687 260 265 0 35 chr3R 13400802 13400888 -14504165 + (CCCGAA)n Simple_repeat Simple_repeat 4 86 0 5 687 3761 0 0 0 chr3R 13401107 13401506 -14503547 + BLOOD_LTR LTR Gypsy 1 399 0 5 687 60533 0 0 0 chr3R 13401506 13408117 -14496936 + BLOOD_I LTR Gypsy 1 6613 0 5 687 3761 0 0 0 chr3R 13408117 13408516 -14496537 + BLOOD_LTR LTR Gypsy 1 399 0 5 687 192 40 0 0 chr3R 13409442 13409467 -14495586 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 687 21 57 0 0 chr3R 13411433 13411468 -14493585 + AT_rich Low_complexity Low_complexity 1 35 0 5 687 22 70 0 0 chr3R 13411507 13411550 -14493503 + AT_rich Low_complexity Low_complexity 1 43 0 5 687 22 80 0 0 chr3R 13415881 13415931 -14489122 + AT_rich Low_complexity Low_complexity 1 50 0 5 687 216 0 0 0 chr3R 13416470 13416494 -14488559 + (GTATG)n Simple_repeat Simple_repeat 2 25 0 5 687 3284 0 0 0 chr3R 13417077 13417438 -14487615 + FW_DM LINE Jockey 4332 4692 0 5 687 32 26 0 0 chr3R 13418978 13419017 -14486036 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 24 0 0 0 chr3R 13419127 13419151 -14485902 + AT_rich Low_complexity Low_complexity 1 24 0 5 687 22 35 0 0 chr3R 13419580 13419609 -14485444 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 243 61 0 0 chr3R 13423501 13423534 -14481519 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 687 21 0 0 0 chr3R 13426124 13426145 -14478908 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 25 51 0 0 chr3R 13426175 13426214 -14478839 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 252 235 0 29 chr3R 13427826 13427896 -14477157 + (GCTG)n Simple_repeat Simple_repeat 3 70 0 5 687 30 69 0 0 chr3R 13429247 13429305 -14475748 + AT_rich Low_complexity Low_complexity 1 58 0 5 687 204 193 35 0 chr3R 13429376 13429433 -14475620 + T-rich Low_complexity Low_complexity 2 60 0 5 687 216 97 0 0 chr3R 13429852 13429883 -14475170 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 687 25 51 0 0 chr3R 13430004 13430043 -14475010 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 186 43 0 0 chr3R 13430654 13430677 -14474376 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 687 21 0 0 0 chr3R 13431502 13431523 -14473530 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 26 0 0 0 chr3R 13434489 13434515 -14470538 + AT_rich Low_complexity Low_complexity 1 26 0 5 687 22 35 0 0 chr3R 13435937 13435966 -14469087 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 24 0 0 0 chr3R 13437646 13437670 -14467383 + AT_rich Low_complexity Low_complexity 1 24 0 5 687 35 41 0 0 chr3R 13437794 13437843 -14467210 + AT_rich Low_complexity Low_complexity 1 49 0 5 687 28 29 0 0 chr3R 13438337 13438372 -14466681 + AT_rich Low_complexity Low_complexity 1 35 0 5 687 203 301 0 0 chr3R 13440343 13440436 -14464617 + GA-rich Low_complexity Low_complexity 1 93 0 5 687 21 36 0 0 chr3R 13443352 13443380 -14461673 + AT_rich Low_complexity Low_complexity 1 28 0 5 687 43 47 0 0 chr3R 13445776 13445840 -14459213 + AT_rich Low_complexity Low_complexity 1 64 0 5 687 25 0 0 0 chr3R 13449696 13449721 -14455332 + AT_rich Low_complexity Low_complexity 1 25 0 5 687 21 0 0 0 chr3R 13451235 13451256 -14453797 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 22 35 0 0 chr3R 13458500 13458529 -14446524 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 180 0 0 0 chr3R 13458662 13458682 -14446371 + (G)n Simple_repeat Simple_repeat 1 20 0 5 687 186 43 0 0 chr3R 13459331 13459354 -14445699 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 687 208 245 0 0 chr3R 13460537 13460590 -14444463 + T-rich Low_complexity Low_complexity 2 54 0 5 687 3985 5 0 0 chr3R 13464094 13464522 -14440531 + ROO_LTR LTR Pao 1 428 0 5 687 234 0 0 0 chr3R 13467217 13467243 -14437810 + (CAT)n Simple_repeat Simple_repeat 1 26 0 5 687 198 0 0 0 chr3R 13468828 13468850 -14436203 + (CATA)n Simple_repeat Simple_repeat 3 24 0 5 687 207 0 0 0 chr3R 13469481 13469504 -14435549 + (A)n Simple_repeat Simple_repeat 1 23 0 5 687 21 36 0 0 chr3R 13469632 13469660 -14435393 + AT_rich Low_complexity Low_complexity 1 28 0 5 687 33 25 0 0 chr3R 13470633 13470673 -14434380 + AT_rich Low_complexity Low_complexity 1 40 0 5 687 654 155 114 36 chr3R 13471602 13471769 -14433284 + DNAREP1_DM LINE Penelope 415 594 0 5 687 25 0 0 0 chr3R 13472188 13472213 -14432840 + AT_rich Low_complexity Low_complexity 1 25 0 5 687 25 51 0 0 chr3R 13472258 13472297 -14432756 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 22 35 0 0 chr3R 13473126 13473155 -14431898 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 266 0 29 0 chr3R 13474029 13474063 -14430990 + (TTA)n Simple_repeat Simple_repeat 3 37 0 5 687 29 47 0 0 chr3R 13477647 13477690 -14427363 + AT_rich Low_complexity Low_complexity 1 43 0 5 687 21 0 0 0 chr3R 13481291 13481312 -14423741 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 22 56 0 0 chr3R 13482333 13482369 -14422684 + AT_rich Low_complexity Low_complexity 1 36 0 5 687 339 250 0 0 chr3R 13483415 13483495 -14421558 + DNAREP1_DM LINE Penelope 515 594 0 5 687 201 74 0 0 chr3R 13489976 13490003 -14415050 + (CCA)n Simple_repeat Simple_repeat 2 28 0 5 687 30 27 0 0 chr3R 13491193 13491230 -14413823 + AT_rich Low_complexity Low_complexity 1 37 0 5 687 23 33 0 0 chr3R 13494076 13494106 -14410947 + AT_rich Low_complexity Low_complexity 1 30 0 5 687 22 0 0 0 chr3R 13495700 13495722 -14409331 + AT_rich Low_complexity Low_complexity 1 22 0 5 687 25 51 0 0 chr3R 13496851 13496890 -14408163 + AT_rich Low_complexity Low_complexity 1 39 0 5 688 235 306 0 0 chr3R 13500902 13500964 -14404089 - ROO_I LTR Pao -7532 724 663 5 688 214 133 22 22 chr3R 13507449 13507495 -14397558 + (CTCTG)n Simple_repeat Simple_repeat 3 48 0 5 688 24 0 0 0 chr3R 13509510 13509534 -14395519 + AT_rich Low_complexity Low_complexity 1 24 0 5 688 24 32 0 0 chr3R 13511414 13511445 -14393608 + AT_rich Low_complexity Low_complexity 1 31 0 5 688 25 0 0 0 chr3R 13511503 13511528 -14393525 + AT_rich Low_complexity Low_complexity 1 25 0 5 688 21 36 0 0 chr3R 13513355 13513383 -14391670 + AT_rich Low_complexity Low_complexity 1 28 0 5 688 25 0 0 0 chr3R 13513544 13513569 -14391484 + AT_rich Low_complexity Low_complexity 1 25 0 5 688 199 114 45 0 chr3R 13514021 13514065 -14390988 + T-rich Low_complexity Low_complexity 1 46 0 5 688 202 209 0 0 chr3R 13514766 13514809 -14390244 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 688 26 0 0 0 chr3R 13514863 13514889 -14390164 + AT_rich Low_complexity Low_complexity 1 26 0 5 688 214 239 20 61 chr3R 13515645 13515743 -14389310 + (CTG)n Simple_repeat Simple_repeat 1 94 0 5 688 487 296 0 12 chr3R 13515756 13515927 -14389126 + (CTG)n Simple_repeat Simple_repeat 1 169 0 5 688 189 196 0 0 chr3R 13518926 13518977 -14386076 + (CTG)n Simple_repeat Simple_repeat 1 51 0 5 688 235 297 0 0 chr3R 13520711 13520802 -14384251 + (CTG)n Simple_repeat Simple_repeat 1 91 0 5 688 209 33 33 0 chr3R 13523295 13523325 -14381728 + (GTTTG)n Simple_repeat Simple_repeat 4 34 0 5 688 24 67 0 0 chr3R 13526241 13526286 -14378767 + AT_rich Low_complexity Low_complexity 1 45 0 5 688 210 71 0 0 chr3R 13526438 13526466 -14378587 + (CGAA)n Simple_repeat Simple_repeat 3 30 0 5 688 206 176 0 38 chr3R 13526542 13526595 -14378458 + (GGATG)n Simple_repeat Simple_repeat 1 51 0 5 688 203 179 0 0 chr3R 13526632 13526689 -14378364 + (CCAA)n Simple_repeat Simple_repeat 1 57 0 5 688 207 0 0 0 chr3R 13527135 13527158 -14377895 + (CAAG)n Simple_repeat Simple_repeat 3 25 0 5 688 234 0 0 0 chr3R 13527308 13527334 -14377719 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 688 195 42 0 0 chr3R 13528719 13528743 -14376310 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 688 192 125 0 0 chr3R 13529436 13529468 -14375585 + (TTTCG)n Simple_repeat Simple_repeat 3 34 0 5 688 201 172 29 88 chr3R 13529792 13529894 -14375159 + (CAAGC)n Simple_repeat Simple_repeat 3 98 0 5 688 220 213 21 0 chr3R 13529881 13529928 -14375125 + (ACTCG)n Simple_repeat Simple_repeat 5 52 0 5 688 180 111 0 0 chr3R 13530314 13530341 -14374712 + (CCG)n Simple_repeat Simple_repeat 2 28 0 5 688 276 100 0 0 chr3R 13533955 13533995 -14371058 + (CTG)n Simple_repeat Simple_repeat 3 42 0 5 688 198 71 0 0 chr3R 13535504 13535532 -14369521 + (CAGGC)n Simple_repeat Simple_repeat 5 32 0 5 688 191 133 22 0 chr3R 13536466 13536511 -14368542 + (CAAGG)n Simple_repeat Simple_repeat 2 47 0 5 688 203 297 0 15 chr3R 13536595 13536660 -14368393 + (CGA)n Simple_repeat Simple_repeat 2 65 0 5 688 227 182 0 0 chr3R 13536919 13536963 -14368090 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 688 273 57 0 0 chr3R 13539148 13539183 -14365870 + (CATCG)n Simple_repeat Simple_repeat 3 37 0 5 688 183 80 0 0 chr3R 13540656 13540681 -14364372 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 688 198 118 0 0 chr3R 13543063 13543097 -14361956 + (CTCG)n Simple_repeat Simple_repeat 3 36 0 5 688 217 227 0 0 chr3R 13543459 13543503 -14361550 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 688 25 0 0 0 chr3R 13544543 13544568 -14360485 + AT_rich Low_complexity Low_complexity 1 25 0 5 688 23 0 0 0 chr3R 13544886 13544909 -14360144 + AT_rich Low_complexity Low_complexity 1 23 0 5 688 31 76 0 0 chr3R 13544992 13545058 -14359995 + AT_rich Low_complexity Low_complexity 1 66 0 5 688 34 93 0 0 chr3R 13545608 13545705 -14359348 + AT_rich Low_complexity Low_complexity 1 97 0 5 688 22 0 0 0 chr3R 13547582 13547604 -14357449 + AT_rich Low_complexity Low_complexity 1 22 0 5 688 26 50 0 0 chr3R 13551164 13551204 -14353849 + AT_rich Low_complexity Low_complexity 1 40 0 5 688 25 31 0 0 chr3R 13560539 13560571 -14344482 + AT_rich Low_complexity Low_complexity 1 32 0 5 688 400 59 0 29 chr3R 13560607 13560677 -14344376 + (TTA)n Simple_repeat Simple_repeat 2 69 0 5 688 200 114 29 0 chr3R 13561235 13561270 -14343783 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 688 270 56 0 0 chr3R 13562312 13562348 -14342705 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 688 225 242 0 0 chr3R 13562926 13562992 -14342061 + (CCAA)n Simple_repeat Simple_repeat 3 68 0 5 688 233 227 15 15 chr3R 13564049 13564116 -14340937 + (CCCA)n Simple_repeat Simple_repeat 2 68 0 5 688 25 31 0 0 chr3R 13564444 13564476 -14340577 + AT_rich Low_complexity Low_complexity 1 32 0 5 688 29 70 0 0 chr3R 13566442 13566499 -14338554 + AT_rich Low_complexity Low_complexity 1 57 0 5 688 212 113 36 36 chr3R 13567724 13567779 -14337274 + (TATAA)n Simple_repeat Simple_repeat 4 58 0 5 688 330 235 70 77 chr3R 13569070 13569213 -14335840 + DNAREP1_DM LINE Penelope 191 332 -262 5 688 192 40 0 0 chr3R 13571158 13571183 -14333870 + (CCA)n Simple_repeat Simple_repeat 2 26 0 5 688 26 30 0 0 chr3R 13574477 13574510 -14330543 + AT_rich Low_complexity Low_complexity 1 33 0 5 688 195 42 0 0 chr3R 13576710 13576734 -14328319 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 688 222 136 0 0 chr3R 13582692 13582736 -14322317 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 688 206 118 0 0 chr3R 13583082 13583116 -14321937 + (TCC)n Simple_repeat Simple_repeat 3 36 0 5 688 29 0 0 0 chr3R 13584271 13584300 -14320753 + AT_rich Low_complexity Low_complexity 1 29 0 5 688 291 136 0 0 chr3R 13587146 13587205 -14317848 + (A)n Simple_repeat Simple_repeat 1 59 0 5 688 35 0 0 0 chr3R 13587977 13588012 -14317041 + AT_rich Low_complexity Low_complexity 1 35 0 5 688 4017 0 0 0 chr3R 13588939 13589367 -14315686 - ROO_LTR LTR Pao 0 428 1 5 688 189 0 0 0 chr3R 13589990 13590011 -14315042 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 5 688 204 97 0 0 chr3R 13594269 13594300 -14310753 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 688 280 157 10 73 chr3R 13599787 13599883 -14305170 - ROO_I LTR Pao -7522 734 645 5 688 242 145 113 0 chr3R 13601884 13601946 -14303107 - ROO_I LTR Pao -7529 727 659 5 688 205 179 0 0 chr3R 13602157 13602196 -14302857 + GA-rich Low_complexity Low_complexity 1 39 0 5 688 250 258 16 0 chr3R 13602869 13602931 -14302122 + (CGAAA)n Simple_repeat Simple_repeat 2 64 0 5 688 216 86 0 0 chr3R 13606079 13606114 -14298939 + (CCA)n Simple_repeat Simple_repeat 3 37 0 5 688 279 114 0 0 chr3R 13608671 13608715 -14296338 + (CTG)n Simple_repeat Simple_repeat 1 44 0 5 688 237 108 0 0 chr3R 13608810 13608847 -14296206 + (CTG)n Simple_repeat Simple_repeat 3 39 0 5 688 368 211 0 0 chr3R 13609058 13609162 -14295891 - ROO_I LTR Pao -7512 744 641 5 688 297 151 0 0 chr3R 13609318 13609371 -14295682 + (TTG)n Simple_repeat Simple_repeat 3 55 0 5 688 276 100 0 0 chr3R 13613947 13613987 -14291066 + (CAGT)n Simple_repeat Simple_repeat 3 42 0 5 688 241 309 24 12 chr3R 13616235 13616317 -14288736 + G-rich Low_complexity Low_complexity 2 84 0 5 688 198 128 0 0 chr3R 13618521 13618560 -14286493 + (TCC)n Simple_repeat Simple_repeat 2 40 0 5 688 225 154 0 37 chr3R 13619316 13619370 -14285683 + T-rich Low_complexity Low_complexity 3 54 0 5 688 219 69 0 0 chr3R 13619976 13620005 -14285048 + (ATTCG)n Simple_repeat Simple_repeat 1 29 0 5 688 33 94 0 0 chr3R 13620412 13620508 -14284545 + AT_rich Low_complexity Low_complexity 1 96 0 5 688 30 27 0 0 chr3R 13620635 13620672 -14284381 + AT_rich Low_complexity Low_complexity 1 37 0 5 688 24 0 0 0 chr3R 13621933 13621957 -14283096 + AT_rich Low_complexity Low_complexity 1 24 0 5 688 47 19 0 0 chr3R 13624446 13624500 -14280553 + AT_rich Low_complexity Low_complexity 1 54 0 5 688 22 0 0 0 chr3R 13624606 13624628 -14280425 + AT_rich Low_complexity Low_complexity 1 22 0 5 688 31 0 0 0 chr3R 13624701 13624732 -14280321 + AT_rich Low_complexity Low_complexity 1 31 0 5 688 347 119 102 0 chr3R 13627344 13627403 -14277650 + DNAREP1_DM LINE Penelope 1 65 -529 5 688 21 36 0 0 chr3R 13631118 13631146 -14273907 + AT_rich Low_complexity Low_complexity 1 28 0 5 689 31 0 0 0 chr3R 13633020 13633051 -14272002 + AT_rich Low_complexity Low_complexity 1 31 0 5 689 21 0 0 0 chr3R 13633134 13633155 -14271898 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 23 68 0 0 chr3R 13634850 13634894 -14270159 + AT_rich Low_complexity Low_complexity 1 44 0 5 689 35 88 0 0 chr3R 13638770 13638861 -14266192 + AT_rich Low_complexity Low_complexity 1 91 0 5 689 192 97 0 0 chr3R 13639397 13639428 -14265625 + (TGGA)n Simple_repeat Simple_repeat 1 31 0 5 689 22 0 0 0 chr3R 13640177 13640199 -14264854 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 375 185 0 0 chr3R 13641115 13641207 -14263846 + (ACTG)n Simple_repeat Simple_repeat 3 94 0 5 689 24 32 0 0 chr3R 13641578 13641609 -14263444 + AT_rich Low_complexity Low_complexity 1 31 0 5 689 24 32 0 0 chr3R 13643025 13643056 -14261997 + AT_rich Low_complexity Low_complexity 1 31 0 5 689 23 33 0 0 chr3R 13646738 13646768 -14258285 + AT_rich Low_complexity Low_complexity 1 30 0 5 689 276 30 0 0 chr3R 13647309 13647342 -14257711 + (TTG)n Simple_repeat Simple_repeat 3 35 0 5 689 25 31 0 0 chr3R 13647681 13647713 -14257340 + AT_rich Low_complexity Low_complexity 1 32 0 5 689 231 88 0 0 chr3R 13649991 13650025 -14255028 + (CAT)n Simple_repeat Simple_repeat 3 36 0 5 689 261 109 0 0 chr3R 13650372 13650418 -14254635 + (CAATC)n Simple_repeat Simple_repeat 5 50 0 5 689 25 90 0 0 chr3R 13650951 13651018 -14254035 + AT_rich Low_complexity Low_complexity 1 67 0 5 689 22 0 0 0 chr3R 13656266 13656288 -14248765 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 22 56 0 0 chr3R 13656368 13656404 -14248649 + AT_rich Low_complexity Low_complexity 1 36 0 5 689 25 0 0 0 chr3R 13659345 13659370 -14245683 + AT_rich Low_complexity Low_complexity 1 25 0 5 689 21 36 0 0 chr3R 13661659 13661687 -14243366 + AT_rich Low_complexity Low_complexity 1 28 0 5 689 228 149 0 0 chr3R 13662757 13662804 -14242249 + (CAA)n Simple_repeat Simple_repeat 1 47 0 5 689 195 100 0 0 chr3R 13663353 13663383 -14241670 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 689 615 111 0 66 chr3R 13663535 13663641 -14241412 - DNAREP1_DM LINE Penelope 0 594 496 5 689 578 70 0 0 chr3R 13663640 13663711 -14241342 - DNAREP1_DM LINE Penelope -522 72 2 5 689 21 57 0 0 chr3R 13666395 13666430 -14238623 + AT_rich Low_complexity Low_complexity 1 35 0 5 689 22 0 0 0 chr3R 13667980 13668002 -14237051 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 186 118 0 0 chr3R 13669261 13669295 -14235758 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 689 23 54 0 0 chr3R 13670517 13670554 -14234499 + AT_rich Low_complexity Low_complexity 1 37 0 5 689 27 0 0 0 chr3R 13674283 13674310 -14230743 + AT_rich Low_complexity Low_complexity 1 27 0 5 689 26 30 0 0 chr3R 13675858 13675891 -14229162 + AT_rich Low_complexity Low_complexity 1 33 0 5 689 24 67 0 0 chr3R 13676451 13676496 -14228557 + AT_rich Low_complexity Low_complexity 1 45 0 5 689 213 39 0 0 chr3R 13677886 13677912 -14227141 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 689 22 0 0 0 chr3R 13680354 13680376 -14224677 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 204 40 0 0 chr3R 13681793 13681818 -14223235 + (CAAAC)n Simple_repeat Simple_repeat 1 25 0 5 689 240 284 11 0 chr3R 13684839 13684927 -14220126 + (CAAA)n Simple_repeat Simple_repeat 1 89 0 5 689 288 0 0 0 chr3R 13685868 13685900 -14219153 + (CAGG)n Simple_repeat Simple_repeat 1 32 0 5 689 23 0 0 0 chr3R 13687195 13687218 -14217835 + AT_rich Low_complexity Low_complexity 1 23 0 5 689 183 203 0 0 chr3R 13690729 13690788 -14214265 + (CAA)n Simple_repeat Simple_repeat 3 61 0 5 689 185 132 26 0 chr3R 13693833 13693871 -14211182 + (TTG)n Simple_repeat Simple_repeat 3 41 0 5 689 282 56 0 0 chr3R 13694427 13694463 -14210590 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 689 183 42 0 0 chr3R 13694823 13694847 -14210206 + (CAG)n Simple_repeat Simple_repeat 1 24 0 5 689 21 0 0 0 chr3R 13696966 13696987 -14208066 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 30 27 0 0 chr3R 13698126 13698163 -14206890 + AT_rich Low_complexity Low_complexity 1 37 0 5 689 209 204 0 0 chr3R 13698492 13698541 -14206512 + T-rich Low_complexity Low_complexity 1 49 0 5 689 192 163 0 0 chr3R 13700531 13700574 -14204479 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 689 215 236 0 0 chr3R 13700723 13700778 -14204275 + T-rich Low_complexity Low_complexity 1 55 0 5 689 22 0 0 0 chr3R 13700847 13700869 -14204184 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 201 288 0 0 chr3R 13703671 13703730 -14201323 + (TGG)n Simple_repeat Simple_repeat 2 60 0 5 689 235 125 0 67 chr3R 13704343 13704403 -14200650 + (CAGAGA)n Simple_repeat Simple_repeat 2 57 0 5 689 189 74 0 0 chr3R 13705190 13705217 -14199836 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 689 272 27 0 26 chr3R 13705502 13705540 -14199513 + (TTG)n Simple_repeat Simple_repeat 1 37 0 5 689 188 81 0 75 chr3R 13706827 13706867 -14198186 + (AGTAG)n Simple_repeat Simple_repeat 4 40 0 5 689 231 114 0 0 chr3R 13707394 13707429 -14197624 + (ATTG)n Simple_repeat Simple_repeat 4 38 0 5 689 262 242 0 18 chr3R 13708004 13708170 -14196883 + (TTG)n Simple_repeat Simple_repeat 1 162 0 5 689 228 86 0 0 chr3R 13708203 13708238 -14196815 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 689 230 248 24 40 chr3R 13708255 13708381 -14196672 + (TTG)n Simple_repeat Simple_repeat 1 124 0 5 689 204 111 0 0 chr3R 13708561 13708597 -14196456 + (TTG)n Simple_repeat Simple_repeat 1 36 0 5 689 21 36 0 0 chr3R 13714659 13714687 -14190366 + AT_rich Low_complexity Low_complexity 1 28 0 5 689 321 47 0 0 chr3R 13715248 13715291 -14189762 + (TTG)n Simple_repeat Simple_repeat 2 44 0 5 689 214 158 0 0 chr3R 13715581 13715619 -14189434 + (TTG)n Simple_repeat Simple_repeat 1 38 0 5 689 206 213 0 0 chr3R 13716857 13716904 -14188149 + (TGG)n Simple_repeat Simple_repeat 2 48 0 5 689 263 269 0 0 chr3R 13716932 13716999 -14188054 + G-rich Low_complexity Low_complexity 1 67 0 5 689 234 156 0 0 chr3R 13716999 13717044 -14188009 + (CTG)n Simple_repeat Simple_repeat 2 46 0 5 689 205 237 0 0 chr3R 13717969 13718007 -14187046 + (CCG)n Simple_repeat Simple_repeat 1 38 0 5 689 216 0 0 0 chr3R 13719430 13719454 -14185599 + (T)n Simple_repeat Simple_repeat 1 24 0 5 689 228 143 0 0 chr3R 13719504 13719546 -14185507 + (GA)n Simple_repeat Simple_repeat 2 43 0 5 689 201 94 0 0 chr3R 13720199 13720231 -14184822 + (CTG)n Simple_repeat Simple_repeat 3 34 0 5 689 204 97 0 0 chr3R 13720513 13720544 -14184509 + (CCA)n Simple_repeat Simple_repeat 2 32 0 5 689 180 77 0 0 chr3R 13722732 13722758 -14182295 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 689 217 279 14 54 chr3R 13722954 13723136 -14181917 + A-rich Low_complexity Low_complexity 1 174 0 5 689 329 164 0 14 chr3R 13723312 13723386 -14181667 + (TTG)n Simple_repeat Simple_repeat 3 75 0 5 689 213 39 0 0 chr3R 13723610 13723636 -14181417 + (CAT)n Simple_repeat Simple_repeat 2 27 0 5 689 279 212 0 0 chr3R 13723779 13723864 -14181189 + (CA)n Simple_repeat Simple_repeat 1 85 0 5 689 225 132 0 0 chr3R 13723953 13723991 -14181062 + (CAA)n Simple_repeat Simple_repeat 2 39 0 5 689 200 143 0 23 chr3R 13724117 13724160 -14180893 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 689 288 0 0 0 chr3R 13727065 13727097 -14177956 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 689 212 100 0 24 chr3R 13729925 13729966 -14175087 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 689 274 230 0 0 chr3R 13730925 13730999 -14174054 + (CTG)n Simple_repeat Simple_repeat 1 74 0 5 689 277 171 0 64 chr3R 13731017 13731111 -14173942 - ROO_I LTR Pao -7529 727 640 5 689 238 235 20 20 chr3R 13731414 13731514 -14173539 + (CTG)n Simple_repeat Simple_repeat 1 100 0 5 689 211 135 0 26 chr3R 13735203 13735241 -14169812 + (TTG)n Simple_repeat Simple_repeat 1 37 0 5 689 222 37 0 0 chr3R 13736182 13736209 -14168844 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 689 21 0 0 0 chr3R 13736994 13737015 -14168038 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 222 91 0 0 chr3R 13738007 13738040 -14167013 + (CAA)n Simple_repeat Simple_repeat 1 33 0 5 689 255 79 0 0 chr3R 13740107 13740145 -14164908 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 689 210 163 0 23 chr3R 13740179 13740223 -14164830 + (CATCC)n Simple_repeat Simple_repeat 4 46 0 5 689 236 244 10 115 chr3R 13741988 13742196 -14162857 - ROO_I LTR Pao -7427 829 644 5 689 208 203 14 28 chr3R 13742232 13742303 -14162750 + (CGA)n Simple_repeat Simple_repeat 1 70 0 5 689 189 0 0 0 chr3R 13742453 13742474 -14162579 + (TC)n Simple_repeat Simple_repeat 1 21 0 5 689 27 73 0 0 chr3R 13743589 13743644 -14161409 + AT_rich Low_complexity Low_complexity 1 55 0 5 689 195 100 0 0 chr3R 13743974 13744004 -14161049 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 689 31 58 0 0 chr3R 13744569 13744621 -14160432 + AT_rich Low_complexity Low_complexity 1 52 0 5 689 38 98 0 0 chr3R 13744719 13744841 -14160212 + AT_rich Low_complexity Low_complexity 1 122 0 5 689 180 111 0 0 chr3R 13747718 13747745 -14157308 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 689 192 158 0 0 chr3R 13750705 13750743 -14154310 + (CAGC)n Simple_repeat Simple_repeat 2 39 0 5 689 4650 2 2 10 chr3R 13751632 13752142 -14152911 - HOBO DNA hAT 0 3016 2511 5 689 8493 1 0 0 chr3R 13752134 13753038 -14152015 - HOBO DNA hAT -2112 904 1 5 689 234 136 0 0 chr3R 13754689 13754733 -14150320 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 689 22 35 0 0 chr3R 13755493 13755522 -14149531 + AT_rich Low_complexity Low_complexity 1 29 0 5 689 230 173 19 0 chr3R 13756815 13756867 -14148186 + (CCCA)n Simple_repeat Simple_repeat 2 54 0 5 689 21 0 0 0 chr3R 13758134 13758155 -14146898 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 267 31 0 0 chr3R 13758197 13758229 -14146824 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 690 192 40 0 0 chr3R 13764589 13764614 -14140439 + (CAA)n Simple_repeat Simple_repeat 3 27 0 5 690 201 196 0 0 chr3R 13765824 13765870 -14139183 + (CAGTT)n Simple_repeat Simple_repeat 4 49 0 5 690 23 68 0 0 chr3R 13766902 13766946 -14138107 + AT_rich Low_complexity Low_complexity 1 44 0 5 690 200 194 0 0 chr3R 13768799 13768835 -14136218 + GA-rich Low_complexity Low_complexity 2 37 0 5 690 22 56 0 0 chr3R 13770544 13770580 -14134473 + AT_rich Low_complexity Low_complexity 1 36 0 5 690 240 35 0 0 chr3R 13772697 13772726 -14132327 + (CTG)n Simple_repeat Simple_repeat 3 31 0 5 690 183 80 0 0 chr3R 13774288 13774313 -14130740 + (T)n Simple_repeat Simple_repeat 1 25 0 5 690 270 125 0 0 chr3R 13774926 13774974 -14130079 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 690 24 0 0 0 chr3R 13775183 13775207 -14129846 + AT_rich Low_complexity Low_complexity 1 24 0 5 690 228 86 0 0 chr3R 13776086 13776121 -14128932 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 690 207 0 0 0 chr3R 13778363 13778386 -14126667 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 690 213 154 0 0 chr3R 13779923 13779962 -14125091 + (CAT)n Simple_repeat Simple_repeat 3 41 0 5 690 271 241 0 0 chr3R 13780092 13780146 -14124907 + (CCCCAG)n Simple_repeat Simple_repeat 1 54 0 5 690 198 0 0 0 chr3R 13780292 13780314 -14124739 + (CAG)n Simple_repeat Simple_repeat 3 24 0 5 690 264 143 0 0 chr3R 13782321 13782377 -14122676 + (TTGG)n Simple_repeat Simple_repeat 3 58 0 5 690 180 77 0 0 chr3R 13785619 13785645 -14119408 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 690 216 143 0 0 chr3R 13787967 13788009 -14117044 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 690 22 35 0 0 chr3R 13788741 13788770 -14116283 + AT_rich Low_complexity Low_complexity 1 29 0 5 690 180 0 0 0 chr3R 13789382 13789402 -14115651 + (CAT)n Simple_repeat Simple_repeat 2 21 0 5 690 25 31 0 0 chr3R 13789806 13789838 -14115215 + AT_rich Low_complexity Low_complexity 1 32 0 5 690 192 135 0 0 chr3R 13792260 13792297 -14112756 + (CCG)n Simple_repeat Simple_repeat 1 37 0 5 690 231 161 45 11 chr3R 13792775 13792863 -14112190 + ROO_I LTR Pao 640 730 -7526 5 690 201 74 0 0 chr3R 13792895 13792922 -14112131 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 690 238 250 12 0 chr3R 13792944 13793024 -14112029 + (CAG)n Simple_repeat Simple_repeat 3 83 0 5 690 241 200 10 87 chr3R 13793045 13793149 -14111904 + ROO_I LTR Pao 637 732 -7524 5 690 249 221 89 25 chr3R 13793122 13793201 -14111852 + TART LINE telomeric 12145 12228 -2249 5 690 268 143 0 140 chr3R 13793347 13793461 -14111592 + ROO_I LTR Pao 641 738 -7518 5 690 232 238 0 0 chr3R 13794546 13794609 -14110444 + (CCAA)n Simple_repeat Simple_repeat 4 66 0 5 690 23 33 0 0 chr3R 13798716 13798746 -14106307 + AT_rich Low_complexity Low_complexity 1 30 0 5 690 230 200 18 0 chr3R 13801187 13801242 -14103811 + (CAA)n Simple_repeat Simple_repeat 2 57 0 5 690 213 39 0 0 chr3R 13801998 13802024 -14103029 + (CAA)n Simple_repeat Simple_repeat 1 26 0 5 690 207 70 91 23 chr3R 13802276 13802320 -14102733 + (CTATA)n Simple_repeat Simple_repeat 3 49 0 5 690 218 32 32 0 chr3R 13804309 13804340 -14100713 + (CAG)n Simple_repeat Simple_repeat 1 32 0 5 690 21 36 0 0 chr3R 13804656 13804684 -14100369 + AT_rich Low_complexity Low_complexity 1 28 0 5 690 183 100 0 0 chr3R 13806975 13807005 -14098048 + (TCC)n Simple_repeat Simple_repeat 3 32 0 5 690 225 0 0 0 chr3R 13808430 13808455 -14096598 + (CATA)n Simple_repeat Simple_repeat 4 28 0 5 690 209 184 0 0 chr3R 13811462 13811500 -14093553 + (CAG)n Simple_repeat Simple_repeat 3 40 0 5 690 309 145 15 120 chr3R 13811551 13811684 -14093369 - ROO_I LTR Pao -7497 759 641 5 690 27 62 0 0 chr3R 13813136 13813184 -14091869 + AT_rich Low_complexity Low_complexity 1 48 0 5 690 33 56 0 0 chr3R 13814287 13814341 -14090712 + AT_rich Low_complexity Low_complexity 1 54 0 5 690 189 0 0 0 chr3R 13819117 13819138 -14085915 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 5 690 206 238 16 0 chr3R 13819177 13819240 -14085813 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 690 180 135 0 0 chr3R 13823071 13823108 -14081945 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 690 225 65 0 0 chr3R 13823715 13823746 -14081307 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 690 237 33 0 0 chr3R 13824680 13824710 -14080343 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 690 212 184 0 0 chr3R 13825040 13825078 -14079975 + T-rich Low_complexity Low_complexity 1 38 0 5 690 180 0 0 0 chr3R 13825885 13825905 -14079148 + (TCTCCC)n Simple_repeat Simple_repeat 6 25 0 5 690 333 100 0 0 chr3R 13827787 13827837 -14077216 + (GAAAA)n Simple_repeat Simple_repeat 1 50 0 5 690 242 160 20 0 chr3R 13828782 13828832 -14076221 + (CAA)n Simple_repeat Simple_repeat 1 51 0 5 690 21 36 0 0 chr3R 13829098 13829126 -14075927 + AT_rich Low_complexity Low_complexity 1 28 0 5 690 21 57 0 0 chr3R 13829426 13829461 -14075592 + AT_rich Low_complexity Low_complexity 1 35 0 5 690 219 69 0 0 chr3R 13832140 13832169 -14072884 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 690 22 0 0 0 chr3R 13832387 13832409 -14072644 + GC_rich Low_complexity Low_complexity 1 22 0 5 690 182 91 30 0 chr3R 13833390 13833423 -14071630 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 690 296 274 0 0 chr3R 13833491 13833586 -14071467 + CT-rich Low_complexity Low_complexity 2 96 0 5 690 226 229 0 16 chr3R 13833675 13833737 -14071316 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 690 200 213 0 0 chr3R 13834737 13834784 -14070269 + A-rich Low_complexity Low_complexity 1 47 0 5 690 27 0 0 0 chr3R 13835088 13835115 -14069938 + AT_rich Low_complexity Low_complexity 1 27 0 5 690 26 50 0 0 chr3R 13835497 13835537 -14069516 + AT_rich Low_complexity Low_complexity 1 40 0 5 690 237 260 10 39 chr3R 13836018 13836122 -14068931 + (CTG)n Simple_repeat Simple_repeat 3 103 0 5 690 249 293 20 10 chr3R 13836812 13836912 -14068141 + (CAG)n Simple_repeat Simple_repeat 1 101 0 5 690 204 279 0 47 chr3R 13837070 13837134 -14067919 + (CCA)n Simple_repeat Simple_repeat 2 62 0 5 690 320 171 0 64 chr3R 13837201 13837295 -14067758 + ROO_I LTR Pao 641 728 -7528 5 690 365 92 0 50 chr3R 13837792 13837872 -14067181 + (CAA)n Simple_repeat Simple_repeat 3 78 0 5 690 21 0 0 0 chr3R 13838492 13838513 -14066540 + AT_rich Low_complexity Low_complexity 1 21 0 5 690 22 70 0 0 chr3R 13838621 13838664 -14066389 + AT_rich Low_complexity Low_complexity 1 43 0 5 690 235 85 21 21 chr3R 13838959 13839007 -14066046 + (CAG)n Simple_repeat Simple_repeat 3 50 0 5 690 259 194 10 10 chr3R 13839020 13839124 -14065929 + ROO_I LTR Pao 644 747 -7509 5 690 207 100 0 0 chr3R 13839124 13839154 -14065899 + (CCA)n Simple_repeat Simple_repeat 1 30 0 5 690 180 77 0 0 chr3R 13839195 13839221 -14065832 + (CGA)n Simple_repeat Simple_repeat 1 26 0 5 690 218 246 0 0 chr3R 13839223 13839292 -14065761 + (CAG)n Simple_repeat Simple_repeat 3 71 0 5 690 252 247 0 0 chr3R 13839432 13839505 -14065548 + A-rich Low_complexity Low_complexity 1 73 0 5 690 204 216 0 0 chr3R 13839727 13839778 -14065275 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 690 21 0 0 0 chr3R 13840964 13840985 -14064068 + AT_rich Low_complexity Low_complexity 1 21 0 5 690 225 94 0 0 chr3R 13841605 13841637 -14063416 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 690 201 74 0 0 chr3R 13841955 13841982 -14063071 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 690 26 30 0 0 chr3R 13842838 13842871 -14062182 + AT_rich Low_complexity Low_complexity 1 33 0 5 690 374 57 0 19 chr3R 13843477 13843531 -14061522 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 690 23 78 0 0 chr3R 13843686 13843737 -14061316 + AT_rich Low_complexity Low_complexity 1 51 0 5 690 27 0 0 0 chr3R 13843937 13843964 -14061089 + AT_rich Low_complexity Low_complexity 1 27 0 5 690 29 84 0 0 chr3R 13844018 13844089 -14060964 + AT_rich Low_complexity Low_complexity 1 71 0 5 690 214 171 0 0 chr3R 13844237 13844278 -14060775 + (CAGAT)n Simple_repeat Simple_repeat 4 44 0 5 690 24 32 0 0 chr3R 13845672 13845703 -14059350 + AT_rich Low_complexity Low_complexity 1 31 0 5 690 28 29 0 0 chr3R 13845747 13845782 -14059271 + AT_rich Low_complexity Low_complexity 1 35 0 5 690 32 0 0 0 chr3R 13846939 13846971 -14058082 + AT_rich Low_complexity Low_complexity 1 32 0 5 690 228 100 0 0 chr3R 13852916 13852956 -14052097 + (TCC)n Simple_repeat Simple_repeat 3 42 0 5 690 21 0 0 0 chr3R 13853315 13853336 -14051717 + AT_rich Low_complexity Low_complexity 1 21 0 5 690 28 0 0 0 chr3R 13855552 13855580 -14049473 + AT_rich Low_complexity Low_complexity 1 28 0 5 690 25 31 0 0 chr3R 13856304 13856336 -14048717 + AT_rich Low_complexity Low_complexity 1 32 0 5 690 180 0 0 0 chr3R 13856897 13856917 -14048136 + (TATG)n Simple_repeat Simple_repeat 1 20 0 5 690 4790 4 0 0 chr3R 13858554 13859072 -14045981 + NOMAD_LTR LTR Gypsy 1 518 0 5 690 61411 1 1 2 chr3R 13859072 13865652 -14039401 + NOMAD_I LTR Gypsy 1 6572 0 5 690 4790 4 0 0 chr3R 13865652 13866170 -14038883 + NOMAD_LTR LTR Gypsy 1 518 0 5 690 195 186 0 0 chr3R 13868617 13868660 -14036393 + (ACTG)n Simple_repeat Simple_repeat 3 45 0 5 690 288 0 0 0 chr3R 13868727 13868759 -14036294 + (CAGC)n Simple_repeat Simple_repeat 1 32 0 5 690 183 42 0 0 chr3R 13869454 13869478 -14035575 + (A)n Simple_repeat Simple_repeat 1 24 0 5 690 30 0 0 0 chr3R 13870069 13870099 -14034954 + AT_rich Low_complexity Low_complexity 1 30 0 5 690 213 247 10 61 chr3R 13875144 13875243 -14029810 + CT-rich Low_complexity Low_complexity 1 94 0 5 690 237 33 0 0 chr3R 13876654 13876684 -14028369 + (TCCA)n Simple_repeat Simple_repeat 2 31 0 5 690 189 74 0 0 chr3R 13877516 13877543 -14027510 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 690 22 0 0 0 chr3R 13877902 13877924 -14027129 + AT_rich Low_complexity Low_complexity 1 22 0 5 690 22 35 0 0 chr3R 13878533 13878562 -14026491 + AT_rich Low_complexity Low_complexity 1 29 0 5 690 27 0 0 0 chr3R 13879369 13879396 -14025657 + AT_rich Low_complexity Low_complexity 1 27 0 5 690 25 0 0 0 chr3R 13883120 13883145 -14021908 + AT_rich Low_complexity Low_complexity 1 25 0 5 690 216 67 0 0 chr3R 13883980 13884010 -14021043 + (CAT)n Simple_repeat Simple_repeat 2 31 0 5 690 222 37 0 0 chr3R 13885622 13885649 -14019404 + (T)n Simple_repeat Simple_repeat 1 27 0 5 690 204 122 19 75 chr3R 13885802 13885855 -14019198 + T-rich Low_complexity Low_complexity 1 50 0 5 690 13775 1 3 0 chr3R 13887370 13888867 -14016186 - FW_DM LINE Jockey 0 4692 3192 5 690 265 24 23 23 chr3R 13890362 13890405 -14014648 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 690 198 0 0 0 chr3R 13891877 13891899 -14013154 + (ATG)n Simple_repeat Simple_repeat 1 22 0 5 690 207 0 0 0 chr3R 13892463 13892486 -14012567 + (TCC)n Simple_repeat Simple_repeat 3 25 0 5 691 22 0 0 0 chr3R 13894375 13894397 -14010656 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 23 0 0 0 chr3R 13894701 13894724 -14010329 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 43 0 0 0 chr3R 13895378 13895421 -14009632 + AT_rich Low_complexity Low_complexity 1 43 0 5 691 201 185 56 0 chr3R 13898511 13898565 -14006488 + A-rich Low_complexity Low_complexity 4 60 0 5 691 32 75 0 0 chr3R 13899740 13899807 -14005246 + AT_rich Low_complexity Low_complexity 1 67 0 5 691 26 50 0 0 chr3R 13899851 13899891 -14005162 + AT_rich Low_complexity Low_complexity 1 40 0 5 691 185 159 23 0 chr3R 13904418 13904462 -14000591 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 691 30 0 0 0 chr3R 13904575 13904605 -14000448 + AT_rich Low_complexity Low_complexity 1 30 0 5 691 183 80 0 0 chr3R 13905203 13905228 -13999825 + (CATATA)n Simple_repeat Simple_repeat 4 28 0 5 691 26 93 0 0 chr3R 13905877 13905952 -13999101 + AT_rich Low_complexity Low_complexity 1 75 0 5 691 192 77 0 0 chr3R 13906245 13906271 -13998782 + (CATTC)n Simple_repeat Simple_repeat 4 29 0 5 691 22 88 0 0 chr3R 13908231 13908288 -13996765 + AT_rich Low_complexity Low_complexity 1 57 0 5 691 764 106 310 0 chr3R 13910141 13910317 -13994736 - DNAREP1_DM LINE Penelope -29 565 335 5 691 24 67 0 0 chr3R 13910459 13910504 -13994549 + AT_rich Low_complexity Low_complexity 1 45 0 5 691 25 31 0 0 chr3R 13912243 13912275 -13992778 + AT_rich Low_complexity Low_complexity 1 32 0 5 691 204 163 0 0 chr3R 13914147 13914190 -13990863 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 5 691 183 42 0 0 chr3R 13914998 13915022 -13990031 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 691 186 43 0 0 chr3R 13915371 13915394 -13989659 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 691 25 0 0 0 chr3R 13917592 13917617 -13987436 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 21 57 0 0 chr3R 13917900 13917935 -13987118 + AT_rich Low_complexity Low_complexity 1 35 0 5 691 249 57 0 0 chr3R 13919515 13919550 -13985503 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 691 234 0 0 0 chr3R 13920592 13920618 -13984435 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 691 22 0 0 0 chr3R 13921088 13921110 -13983943 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 23 33 0 0 chr3R 13921402 13921432 -13983621 + AT_rich Low_complexity Low_complexity 1 30 0 5 691 366 129 0 0 chr3R 13922267 13922329 -13982724 + (CAG)n Simple_repeat Simple_repeat 1 62 0 5 691 252 122 0 0 chr3R 13925567 13925608 -13979445 + (CTG)n Simple_repeat Simple_repeat 1 41 0 5 691 180 152 0 0 chr3R 13926292 13926325 -13978728 + T-rich Low_complexity Low_complexity 1 33 0 5 691 233 29 0 29 chr3R 13927135 13927170 -13977883 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 691 28 29 0 0 chr3R 13927539 13927574 -13977479 + AT_rich Low_complexity Low_complexity 1 35 0 5 691 200 31 0 59 chr3R 13927910 13927944 -13977109 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 5 691 40 0 0 0 chr3R 13929658 13929698 -13975355 + AT_rich Low_complexity Low_complexity 1 40 0 5 691 189 94 0 0 chr3R 13930115 13930147 -13974906 + (T)n Simple_repeat Simple_repeat 1 32 0 5 691 21 0 0 0 chr3R 13930644 13930665 -13974388 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 36 53 0 0 chr3R 13930754 13930811 -13974242 + AT_rich Low_complexity Low_complexity 1 57 0 5 691 36 23 0 0 chr3R 13930860 13930903 -13974150 + AT_rich Low_complexity Low_complexity 1 43 0 5 691 27 0 0 0 chr3R 13930966 13930993 -13974060 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 24 0 0 0 chr3R 13931055 13931079 -13973974 + AT_rich Low_complexity Low_complexity 1 24 0 5 691 27 0 0 0 chr3R 13932811 13932838 -13972215 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 234 91 0 0 chr3R 13933170 13933203 -13971850 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 691 198 71 0 0 chr3R 13933281 13933309 -13971744 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 691 198 0 0 0 chr3R 13933801 13933823 -13971230 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 5 691 30 0 0 0 chr3R 13934451 13934481 -13970572 + AT_rich Low_complexity Low_complexity 1 30 0 5 691 201 39 0 0 chr3R 13935339 13935365 -13969688 + (T)n Simple_repeat Simple_repeat 1 26 0 5 691 195 100 0 0 chr3R 13936329 13936359 -13968694 + (T)n Simple_repeat Simple_repeat 1 30 0 5 691 22 0 0 0 chr3R 13937300 13937322 -13967731 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 255 190 0 0 chr3R 13937507 13937565 -13967488 + CT-rich Low_complexity Low_complexity 2 59 0 5 691 28 0 0 0 chr3R 13938781 13938809 -13966244 + AT_rich Low_complexity Low_complexity 1 28 0 5 691 23 0 0 0 chr3R 13942520 13942543 -13962510 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 204 40 0 0 chr3R 13943971 13943996 -13961057 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 691 285 200 13 0 chr3R 13944412 13944533 -13960520 + (TCTCTG)n Simple_repeat Simple_repeat 1 122 0 5 691 234 0 0 0 chr3R 13945062 13945088 -13959965 + (A)n Simple_repeat Simple_repeat 1 26 0 5 691 201 74 0 0 chr3R 13945346 13945373 -13959680 + (CAGT)n Simple_repeat Simple_repeat 1 27 0 5 691 28 61 0 0 chr3R 13946511 13946560 -13958493 + AT_rich Low_complexity Low_complexity 1 49 0 5 691 22 70 0 0 chr3R 13948595 13948638 -13956415 + AT_rich Low_complexity Low_complexity 1 43 0 5 691 27 81 0 0 chr3R 13948653 13948715 -13956338 + AT_rich Low_complexity Low_complexity 1 62 0 5 691 23 68 0 0 chr3R 13950110 13950154 -13954899 + AT_rich Low_complexity Low_complexity 1 44 0 5 691 207 0 0 0 chr3R 13950472 13950495 -13954558 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 691 23 0 0 0 chr3R 13951308 13951331 -13953722 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 189 197 0 0 chr3R 13951793 13951854 -13953199 + A-rich Low_complexity Low_complexity 1 61 0 5 691 22 0 0 0 chr3R 13954286 13954308 -13950745 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 26 0 0 0 chr3R 13954466 13954492 -13950561 + AT_rich Low_complexity Low_complexity 1 26 0 5 691 182 37 37 0 chr3R 13954492 13954519 -13950534 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 691 333 125 0 0 chr3R 13955256 13955312 -13949741 + (T)n Simple_repeat Simple_repeat 1 56 0 5 691 379 48 32 0 chr3R 13956276 13956338 -13948715 + (CAA)n Simple_repeat Simple_repeat 3 66 0 5 691 309 196 19 10 chr3R 13956412 13956515 -13948538 + ROO_I LTR Pao 641 744 -7512 5 691 227 178 0 0 chr3R 13956520 13956565 -13948488 + (CAA)n Simple_repeat Simple_repeat 1 45 0 5 691 240 111 0 0 chr3R 13956574 13956610 -13948443 + (CCA)n Simple_repeat Simple_repeat 3 38 0 5 691 576 163 0 0 chr3R 13956618 13956747 -13948306 + (CAA)n Simple_repeat Simple_repeat 3 131 0 5 691 311 132 15 0 chr3R 13956832 13956900 -13948153 + (CAG)n Simple_repeat Simple_repeat 3 71 0 5 691 449 62 0 15 chr3R 13957044 13957110 -13947943 + (CAG)n Simple_repeat Simple_repeat 3 67 0 5 691 264 137 0 0 chr3R 13957360 13957411 -13947642 + (CAG)n Simple_repeat Simple_repeat 1 51 0 5 691 355 175 0 104 chr3R 13958029 13958144 -13946909 + ROO_I LTR Pao 641 743 -7513 5 691 22 0 0 0 chr3R 13958834 13958856 -13946197 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 22 0 0 0 chr3R 13958880 13958902 -13946151 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 31 26 0 0 chr3R 13959454 13959492 -13945561 + AT_rich Low_complexity Low_complexity 1 38 0 5 691 27 0 0 0 chr3R 13960379 13960406 -13944647 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 353 75 19 0 chr3R 13960638 13960691 -13944362 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 691 189 0 0 0 chr3R 13961605 13961626 -13943427 + (CGAAA)n Simple_repeat Simple_repeat 2 22 0 5 691 195 100 0 0 chr3R 13962575 13962605 -13942448 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 691 228 100 0 0 chr3R 13964635 13964665 -13940388 - DNAREP1_DM LINE Penelope -536 58 29 5 691 35 41 0 0 chr3R 13964713 13964762 -13940291 + AT_rich Low_complexity Low_complexity 1 49 0 5 691 204 213 0 0 chr3R 13966641 13966702 -13938351 + (CAG)n Simple_repeat Simple_repeat 2 62 0 5 691 358 134 29 29 chr3R 13966883 13966952 -13938101 + DNAREP1_DM LINE Penelope 378 446 -148 5 691 450 234 0 0 chr3R 13966952 13967127 -13937926 + (CAGA)n Simple_repeat Simple_repeat 4 178 0 5 691 390 244 0 0 chr3R 13967128 13967214 -13937839 + (CGGA)n Simple_repeat Simple_repeat 4 89 0 5 691 348 83 0 0 chr3R 13968714 13968762 -13936291 + (TTGG)n Simple_repeat Simple_repeat 3 50 0 5 691 261 191 0 8 chr3R 13969662 13969736 -13935317 - ROO_I LTR Pao -7542 714 644 5 691 303 242 21 21 chr3R 13971452 13971549 -13933504 + (CAA)n Simple_repeat Simple_repeat 1 97 0 5 691 189 0 0 0 chr3R 13972817 13972838 -13932215 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 691 216 97 0 0 chr3R 13974715 13974746 -13930307 + (TTA)n Simple_repeat Simple_repeat 2 32 0 5 691 631 145 410 5 chr3R 13975278 13975451 -13929602 + DMRP1 Unknown Unknown 98 340 -6 5 691 29 0 0 0 chr3R 13976168 13976197 -13928856 + AT_rich Low_complexity Low_complexity 1 29 0 5 691 24 53 0 0 chr3R 13980609 13980647 -13924406 + AT_rich Low_complexity Low_complexity 1 38 0 5 691 26 30 0 0 chr3R 13982331 13982364 -13922689 + AT_rich Low_complexity Low_complexity 1 33 0 5 691 198 103 0 0 chr3R 13982730 13982759 -13922294 + (CATA)n Simple_repeat Simple_repeat 3 31 0 5 691 25 0 0 0 chr3R 13984371 13984396 -13920657 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 211 182 0 0 chr3R 13988012 13988045 -13917008 + (TTG)n Simple_repeat Simple_repeat 3 35 0 5 691 22 0 0 0 chr3R 13990297 13990319 -13914734 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 23 0 0 0 chr3R 13992911 13992934 -13912119 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 21 71 0 0 chr3R 13993054 13993096 -13911957 + AT_rich Low_complexity Low_complexity 1 42 0 5 691 26 0 0 0 chr3R 13993130 13993156 -13911897 + AT_rich Low_complexity Low_complexity 1 26 0 5 691 212 133 0 43 chr3R 13993758 13993805 -13911248 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 691 234 128 0 0 chr3R 13994030 13994069 -13910984 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 691 192 135 0 0 chr3R 13995073 13995110 -13909943 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 691 21 36 0 0 chr3R 13995322 13995350 -13909703 + AT_rich Low_complexity Low_complexity 1 28 0 5 691 449 341 0 6 chr3R 13995470 13995650 -13909403 + (CAG)n Simple_repeat Simple_repeat 1 179 0 5 691 226 324 9 29 chr3R 13995670 13995775 -13909278 + ROO_I LTR Pao 633 735 -7521 5 691 39 50 0 0 chr3R 13996299 13996359 -13908694 + AT_rich Low_complexity Low_complexity 1 60 0 5 691 348 138 0 0 chr3R 13999057 13999122 -13905931 + (CAG)n Simple_repeat Simple_repeat 1 65 0 5 691 206 214 0 23 chr3R 14000392 14000435 -13904618 + (CCG)n Simple_repeat Simple_repeat 2 43 0 5 691 25 0 0 0 chr3R 14000933 14000958 -13904095 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 27 0 0 0 chr3R 14001002 14001029 -13904024 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 23 92 0 0 chr3R 14002927 14002992 -13902061 + AT_rich Low_complexity Low_complexity 1 65 0 5 691 25 31 0 0 chr3R 14004669 14004701 -13900352 + AT_rich Low_complexity Low_complexity 1 32 0 5 691 212 0 36 0 chr3R 14005140 14005168 -13899885 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 691 21 0 0 0 chr3R 14005728 14005749 -13899304 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 25 0 0 0 chr3R 14006838 14006863 -13898190 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 207 69 0 0 chr3R 14009076 14009105 -13895948 + (CTG)n Simple_repeat Simple_repeat 3 31 0 5 691 1168 0 0 0 chr3R 14009218 14009348 -13895705 - ARS406_DM Unknown Unknown -38 315 186 5 691 24 53 0 0 chr3R 14011308 14011346 -13893707 + AT_rich Low_complexity Low_complexity 1 38 0 5 691 30 45 0 0 chr3R 14014671 14014715 -13890338 + AT_rich Low_complexity Low_complexity 1 44 0 5 691 271 60 20 20 chr3R 14018753 14018804 -13886249 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 691 180 0 0 0 chr3R 14018919 14018939 -13886114 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 5 691 207 167 42 0 chr3R 14018991 14019039 -13886014 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 691 207 69 0 0 chr3R 14020859 14020888 -13884165 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 691 222 176 0 0 chr3R 14022274 14022325 -13882728 + (TTG)n Simple_repeat Simple_repeat 1 51 0 5 691 815 175 123 5 chr3R 14022421 14022633 -13882420 - HMSBEAGLE_I LTR Gypsy -5802 727 491 5 691 21 0 0 0 chr3R 14022633 14022654 -13882399 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 226 231 15 15 chr3R 14022844 14022910 -13882143 + GA-rich Low_complexity Low_complexity 2 67 0 5 691 238 266 13 0 chr3R 14024589 14024668 -13880385 + GA-rich Low_complexity Low_complexity 1 80 0 5 692 21 0 0 0 chr3R 14024755 14024776 -13880277 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 207 297 14 0 chr3R 14024830 14024904 -13880149 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 692 192 40 0 0 chr3R 14026648 14026673 -13878380 + (T)n Simple_repeat Simple_repeat 1 25 0 5 692 294 222 258 25 chr3R 14031269 14031389 -13873664 + DNAREP1_DM LINE Penelope 447 594 0 5 692 210 212 0 57 chr3R 14033425 14033495 -13871558 + T-rich Low_complexity Low_complexity 2 67 0 5 692 231 208 0 20 chr3R 14035142 14035191 -13869862 + CT-rich Low_complexity Low_complexity 3 50 0 5 692 35 41 0 0 chr3R 14038002 14038051 -13867002 + AT_rich Low_complexity Low_complexity 1 49 0 5 692 847 119 356 0 chr3R 14040783 14040960 -13864093 + DNAREP1_DM LINE Penelope 355 594 0 5 692 52 30 0 0 chr3R 14049262 14049328 -13855725 + AT_rich Low_complexity Low_complexity 1 66 0 5 692 25 31 0 0 chr3R 14055257 14055289 -13849764 + AT_rich Low_complexity Low_complexity 1 32 0 5 692 258 81 0 0 chr3R 14058764 14058801 -13846252 + (ATGGTG)n Simple_repeat Simple_repeat 1 37 0 5 692 228 246 0 42 chr3R 14058815 14058887 -13846166 + (TCTG)n Simple_repeat Simple_repeat 2 70 0 5 692 26 82 0 0 chr3R 14059177 14059238 -13845815 + AT_rich Low_complexity Low_complexity 1 61 0 5 692 231 36 0 0 chr3R 14061960 14061988 -13843065 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 692 213 39 0 0 chr3R 14062359 14062385 -13842668 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 692 201 139 0 0 chr3R 14062558 14062601 -13842452 + (CAG)n Simple_repeat Simple_repeat 2 44 0 5 692 210 71 0 0 chr3R 14062659 14062687 -13842366 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 692 213 39 0 0 chr3R 14064157 14064183 -13840870 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 692 25 65 0 0 chr3R 14064730 14064776 -13840277 + AT_rich Low_complexity Low_complexity 1 46 0 5 692 22 0 0 0 chr3R 14068030 14068052 -13837001 + AT_rich Low_complexity Low_complexity 1 22 0 5 692 231 278 0 0 chr3R 14069707 14069761 -13835292 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 692 231 36 0 0 chr3R 14070909 14070937 -13834116 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 692 186 43 0 0 chr3R 14071638 14071661 -13833392 + (CCCCCT)n Simple_repeat Simple_repeat 4 26 0 5 692 201 241 0 0 chr3R 14071901 14071955 -13833098 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 692 278 107 18 0 chr3R 14074092 14074148 -13830905 + (CAA)n Simple_repeat Simple_repeat 3 59 0 5 692 30 27 0 0 chr3R 14074521 14074558 -13830495 + AT_rich Low_complexity Low_complexity 1 37 0 5 692 206 169 15 0 chr3R 14075069 14075134 -13829919 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 692 284 143 18 0 chr3R 14075436 14075492 -13829561 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 692 31 0 0 0 chr3R 14075813 14075844 -13829209 + AT_rich Low_complexity Low_complexity 1 31 0 5 692 28 0 0 0 chr3R 14083364 14083392 -13821661 + AT_rich Low_complexity Low_complexity 1 28 0 5 692 1088 144 65 56 chr3R 14084907 14085121 -13819932 - DNAREP1_DM LINE Penelope 0 594 379 5 692 475 122 256 0 chr3R 14086249 14086339 -13818714 - DMRP1 Unknown Unknown -222 124 12 5 692 201 152 0 0 chr3R 14086914 14086947 -13818106 + (TATATG)n Simple_repeat Simple_repeat 1 33 0 5 692 40 0 0 0 chr3R 14087101 14087141 -13817912 + AT_rich Low_complexity Low_complexity 1 40 0 5 692 189 0 0 0 chr3R 14087797 14087818 -13817235 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 692 24 53 0 0 chr3R 14088618 14088656 -13816397 + AT_rich Low_complexity Low_complexity 1 38 0 5 692 246 62 0 0 chr3R 14089959 14089991 -13815062 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 692 26 0 0 0 chr3R 14090751 14090777 -13814276 + AT_rich Low_complexity Low_complexity 1 26 0 5 692 209 163 0 20 chr3R 14092707 14092757 -13812296 + (ATG)n Simple_repeat Simple_repeat 3 51 0 5 692 21 0 0 0 chr3R 14093108 14093129 -13811924 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 312 225 0 0 chr3R 14095497 14095577 -13809476 + ROO_I LTR Pao 647 726 -7530 5 692 236 197 0 0 chr3R 14095618 14095689 -13809364 + ROO_I LTR Pao 640 710 -7546 5 692 330 246 0 0 chr3R 14095861 14095975 -13809078 + (CAA)n Simple_repeat Simple_repeat 3 116 0 5 692 21 0 0 0 chr3R 14115177 14115198 -13789855 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 209 83 28 0 chr3R 14120505 14120541 -13784512 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 692 1308 96 45 0 chr3R 14121392 14121591 -13783462 + DNAREP1_DM LINE Penelope 1 208 -386 5 692 228 67 0 0 chr3R 14123016 14123046 -13782007 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 692 203 171 0 0 chr3R 14123857 14123892 -13781161 + (ATTCG)n Simple_repeat Simple_repeat 5 39 0 5 692 24 67 0 0 chr3R 14127858 14127903 -13777150 + AT_rich Low_complexity Low_complexity 1 45 0 5 692 40 0 0 0 chr3R 14128865 14128905 -13776148 + AT_rich Low_complexity Low_complexity 1 40 0 5 692 219 152 0 0 chr3R 14132205 14132251 -13772802 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 692 204 40 0 0 chr3R 14135796 14135821 -13769232 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 692 21 0 0 0 chr3R 14135825 14135846 -13769207 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 220 324 7 35 chr3R 14136677 14136818 -13768235 + (CCCCAG)n Simple_repeat Simple_repeat 2 138 0 5 692 236 300 0 0 chr3R 14136756 14136816 -13768237 + (CCCGAA)n Simple_repeat Simple_repeat 4 63 0 5 692 23 78 0 0 chr3R 14136982 14137033 -13768020 + AT_rich Low_complexity Low_complexity 1 51 0 5 692 21 0 0 0 chr3R 14137060 14137081 -13767972 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 21 71 0 0 chr3R 14137109 14137151 -13767902 + AT_rich Low_complexity Low_complexity 1 42 0 5 692 204 160 60 0 chr3R 14140829 14140879 -13764174 + (TTAAA)n Simple_repeat Simple_repeat 4 56 0 5 692 29 60 0 0 chr3R 14140894 14140944 -13764109 + AT_rich Low_complexity Low_complexity 1 50 0 5 692 27 29 0 0 chr3R 14141766 14141800 -13763253 + AT_rich Low_complexity Low_complexity 1 34 0 5 692 34 0 0 0 chr3R 14142444 14142478 -13762575 + AT_rich Low_complexity Low_complexity 1 34 0 5 692 21 0 0 0 chr3R 14145582 14145603 -13759450 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 299 203 0 0 chr3R 14147032 14147091 -13757962 + DNAREP1_DM LINE Penelope 1 59 -535 5 692 28 29 0 0 chr3R 14150039 14150074 -13754979 + AT_rich Low_complexity Low_complexity 1 35 0 5 692 207 259 0 0 chr3R 14150953 14151007 -13754046 + GA-rich Low_complexity Low_complexity 1 54 0 5 692 28 29 0 0 chr3R 14153948 14153983 -13751070 + AT_rich Low_complexity Low_complexity 1 35 0 5 692 197 140 0 23 chr3R 14154341 14154385 -13750668 + (TAGGG)n Simple_repeat Simple_repeat 3 45 0 5 693 240 267 13 0 chr3R 14156817 14156892 -13748161 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 693 13045 2 0 1 chr3R 14157560 14158996 -13746057 - M4DM DNA Transib 0 1435 1 5 693 225 146 0 0 chr3R 14161233 14161281 -13743772 + (TTG)n Simple_repeat Simple_repeat 1 48 0 5 693 47 44 0 0 chr3R 14161597 14161665 -13743388 + AT_rich Low_complexity Low_complexity 1 68 0 5 693 207 100 0 0 chr3R 14162046 14162076 -13742977 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 693 23 0 0 0 chr3R 14164149 14164172 -13740881 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 207 167 0 0 chr3R 14166349 14166391 -13738662 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 693 369 100 0 0 chr3R 14172413 14172463 -13732590 + DNAREP1_DM LINE Penelope 55 104 -490 5 693 434 98 343 0 chr3R 14172451 14172553 -13732500 + DNAREP1_DM LINE Penelope 458 594 0 5 693 216 222 0 18 chr3R 14173939 14173994 -13731059 + (TTG)n Simple_repeat Simple_repeat 1 54 0 5 693 204 182 0 0 chr3R 14174140 14174184 -13730869 + (CATGC)n Simple_repeat Simple_repeat 5 48 0 5 693 33 43 0 0 chr3R 14174319 14174366 -13730687 + AT_rich Low_complexity Low_complexity 1 47 0 5 693 240 122 0 0 chr3R 14174745 14174786 -13730267 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 693 21 0 0 0 chr3R 14175176 14175197 -13729856 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 207 156 0 0 chr3R 14180777 14180809 -13724244 + (CCG)n Simple_repeat Simple_repeat 1 32 0 5 693 216 67 0 0 chr3R 14180815 14180845 -13724208 + (CTG)n Simple_repeat Simple_repeat 2 31 0 5 693 207 114 0 0 chr3R 14181324 14181359 -13723694 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 693 21 0 0 0 chr3R 14182123 14182144 -13722909 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 23 33 0 0 chr3R 14182166 14182196 -13722857 + AT_rich Low_complexity Low_complexity 1 30 0 5 693 192 40 0 0 chr3R 14184428 14184453 -13720600 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 693 22 35 0 0 chr3R 14185156 14185185 -13719868 + AT_rich Low_complexity Low_complexity 1 29 0 5 693 192 261 0 0 chr3R 14188318 14188410 -13716643 + (ATG)n Simple_repeat Simple_repeat 3 94 0 5 693 23 33 0 0 chr3R 14191591 14191621 -13713432 + AT_rich Low_complexity Low_complexity 1 30 0 5 693 22 0 0 0 chr3R 14191986 14192008 -13713045 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 251 247 0 0 chr3R 14194424 14194497 -13710556 + (TGG)n Simple_repeat Simple_repeat 3 75 0 5 693 213 180 0 39 chr3R 14198727 14198779 -13706274 + (CATAC)n Simple_repeat Simple_repeat 2 51 0 5 693 285 89 0 0 chr3R 14200781 14200826 -13704227 + (CATTT)n Simple_repeat Simple_repeat 1 45 0 5 693 423 59 0 0 chr3R 14203514 14203565 -13701488 + DNAREP1_DM LINE Penelope 20 70 -524 5 693 1032 95 310 0 chr3R 14203561 14203749 -13701304 + DNAREP1_DM LINE Penelope 349 594 0 5 693 384 149 151 95 chr3R 14211174 14211300 -13693753 - DNAREP1_DM LINE Penelope -10 584 452 5 693 243 202 55 77 chr3R 14212345 14212436 -13692617 + DOC3_DM LINE Jockey 1852 1940 -2800 5 693 21 0 0 0 chr3R 14215942 14215963 -13689090 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 279 0 0 0 chr3R 14216647 14216678 -13688375 + (AATAG)n Simple_repeat Simple_repeat 2 32 0 5 693 21 95 0 0 chr3R 14219387 14219450 -13685603 + AT_rich Low_complexity Low_complexity 1 63 0 5 693 23 68 0 0 chr3R 14225258 14225302 -13679751 + AT_rich Low_complexity Low_complexity 1 44 0 5 693 21 0 0 0 chr3R 14228535 14228556 -13676497 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 252 130 0 0 chr3R 14232869 14232915 -13672138 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 693 217 155 17 17 chr3R 14233238 14233297 -13671756 + (ATGGTG)n Simple_repeat Simple_repeat 4 62 0 5 693 202 208 0 0 chr3R 14234874 14234922 -13670131 + (CAG)n Simple_repeat Simple_repeat 2 49 0 5 693 32 0 0 0 chr3R 14235175 14235207 -13669846 + AT_rich Low_complexity Low_complexity 1 32 0 5 693 202 219 0 0 chr3R 14238177 14238218 -13666835 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 693 22 35 0 0 chr3R 14238735 14238764 -13666289 + AT_rich Low_complexity Low_complexity 1 29 0 5 693 26 64 0 0 chr3R 14239897 14239944 -13665109 + AT_rich Low_complexity Low_complexity 1 47 0 5 693 261 0 0 0 chr3R 14240628 14240657 -13664396 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 693 22 0 0 0 chr3R 14240917 14240939 -13664114 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 22 0 0 0 chr3R 14241139 14241161 -13663892 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 207 0 0 0 chr3R 14241789 14241812 -13663241 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 693 489 133 0 0 chr3R 14242355 14242453 -13662600 + (CTG)n Simple_repeat Simple_repeat 1 98 0 5 693 186 103 0 0 chr3R 14243182 14243211 -13661842 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 693 227 191 0 0 chr3R 14243249 14243296 -13661757 + GA-rich Low_complexity Low_complexity 1 47 0 5 693 204 40 0 0 chr3R 14243966 14243991 -13661062 + (T)n Simple_repeat Simple_repeat 1 25 0 5 693 22 35 0 0 chr3R 14244133 14244162 -13660891 + AT_rich Low_complexity Low_complexity 1 29 0 5 693 234 176 0 0 chr3R 14244200 14244251 -13660802 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 693 234 236 14 27 chr3R 14244428 14244502 -13660551 + T-rich Low_complexity Low_complexity 3 75 0 5 693 252 137 0 0 chr3R 14244506 14244557 -13660496 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 693 25 65 0 0 chr3R 14244689 14244735 -13660318 + AT_rich Low_complexity Low_complexity 1 46 0 5 693 345 47 0 0 chr3R 14245279 14245322 -13659731 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 693 203 175 0 0 chr3R 14245488 14245528 -13659525 + T-rich Low_complexity Low_complexity 1 40 0 5 693 217 170 0 21 chr3R 14245820 14245868 -13659185 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 693 195 69 0 0 chr3R 14246136 14246165 -13658888 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 693 213 214 35 18 chr3R 14246468 14246525 -13658528 + (CAGAT)n Simple_repeat Simple_repeat 4 61 0 5 693 184 104 0 59 chr3R 14246618 14246669 -13658384 + (TTTAG)n Simple_repeat Simple_repeat 2 49 0 5 693 237 83 0 0 chr3R 14247039 14247075 -13657978 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 693 180 0 0 0 chr3R 14247119 14247139 -13657914 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 693 207 139 0 0 chr3R 14247775 14247811 -13657242 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 693 192 77 0 0 chr3R 14247848 14247874 -13657179 + (TTA)n Simple_repeat Simple_repeat 1 26 0 5 693 192 241 0 0 chr3R 14247927 14247985 -13657068 + (TTG)n Simple_repeat Simple_repeat 1 58 0 5 693 338 215 0 27 chr3R 14248127 14248237 -13656816 - ROO_I LTR Pao -7513 743 637 5 693 217 216 0 0 chr3R 14248378 14248429 -13656624 + (CTG)n Simple_repeat Simple_repeat 3 53 0 5 693 410 186 0 0 chr3R 14248442 14248539 -13656514 - ROO_I LTR Pao -7519 737 641 5 693 25 0 0 0 chr3R 14248911 14248936 -13656117 + AT_rich Low_complexity Low_complexity 1 25 0 5 693 299 141 16 0 chr3R 14249179 14249243 -13655810 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 693 23 0 0 0 chr3R 14250638 14250661 -13654392 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 26 50 0 0 chr3R 14250682 14250722 -13654331 + AT_rich Low_complexity Low_complexity 1 40 0 5 693 223 186 0 0 chr3R 14251644 14251687 -13653366 + T-rich Low_complexity Low_complexity 1 43 0 5 693 28 29 0 0 chr3R 14254193 14254228 -13650825 + AT_rich Low_complexity Low_complexity 1 35 0 5 693 210 143 0 0 chr3R 14254545 14254580 -13650473 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 693 210 136 0 0 chr3R 14254589 14254633 -13650420 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 693 328 128 0 25 chr3R 14254826 14254906 -13650147 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 693 23 0 0 0 chr3R 14255269 14255292 -13649761 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 25 31 0 0 chr3R 14255455 14255487 -13649566 + AT_rich Low_complexity Low_complexity 1 32 0 5 693 210 174 0 0 chr3R 14257560 14257606 -13647447 + (CTG)n Simple_repeat Simple_repeat 1 46 0 5 693 210 26 0 71 chr3R 14257823 14257865 -13647188 + (CTTTA)n Simple_repeat Simple_repeat 1 39 0 5 693 216 250 0 0 chr3R 14258891 14258931 -13646122 + (CCTG)n Simple_repeat Simple_repeat 3 42 0 5 693 23 0 0 0 chr3R 14259320 14259343 -13645710 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 344 275 0 29 chr3R 14260157 14260262 -13644791 - ROO_I LTR Pao -7513 743 642 5 693 183 204 0 0 chr3R 14260365 14260409 -13644644 + (CCG)n Simple_repeat Simple_repeat 3 46 0 5 693 248 154 0 19 chr3R 14260490 14260543 -13644510 + (CCG)n Simple_repeat Simple_repeat 1 52 0 5 693 189 74 0 0 chr3R 14261926 14261953 -13643100 + (TTG)n Simple_repeat Simple_repeat 3 29 0 5 693 219 69 0 0 chr3R 14262803 14262832 -13642221 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 693 29 28 0 0 chr3R 14265721 14265757 -13639296 + AT_rich Low_complexity Low_complexity 1 36 0 5 693 197 33 33 0 chr3R 14267044 14267074 -13637979 + (CAGTG)n Simple_repeat Simple_repeat 2 32 0 5 693 28 0 0 0 chr3R 14267492 14267520 -13637533 + AT_rich Low_complexity Low_complexity 1 28 0 5 693 28 0 0 0 chr3R 14268128 14268156 -13636897 + AT_rich Low_complexity Low_complexity 1 28 0 5 693 387 41 0 0 chr3R 14268551 14268600 -13636453 + (CTG)n Simple_repeat Simple_repeat 2 50 0 5 693 213 132 0 0 chr3R 14268943 14268981 -13636072 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 693 22 0 0 0 chr3R 14269498 14269520 -13635533 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 185 108 0 26 chr3R 14270208 14270246 -13634807 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 5 693 24 53 0 0 chr3R 14270422 14270460 -13634593 + AT_rich Low_complexity Low_complexity 1 38 0 5 693 185 209 0 15 chr3R 14270823 14270891 -13634162 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 693 237 146 0 0 chr3R 14271066 14271114 -13633939 + (T)n Simple_repeat Simple_repeat 1 48 0 5 693 246 116 0 0 chr3R 14271210 14271253 -13633800 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 693 37 23 0 0 chr3R 14272710 14272754 -13632299 + AT_rich Low_complexity Low_complexity 1 44 0 5 693 237 152 22 0 chr3R 14272818 14272864 -13632189 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 693 186 208 0 0 chr3R 14273170 14273223 -13631830 + (CAGAGA)n Simple_repeat Simple_repeat 5 57 0 5 693 30 69 0 0 chr3R 14273567 14273625 -13631428 + AT_rich Low_complexity Low_complexity 1 58 0 5 693 180 200 0 0 chr3R 14275884 14275924 -13629129 + (TATG)n Simple_repeat Simple_repeat 1 40 0 5 693 228 35 0 0 chr3R 14277820 14277849 -13627204 + (CAAAT)n Simple_repeat Simple_repeat 2 30 0 5 693 22 56 0 0 chr3R 14279697 14279733 -13625320 + AT_rich Low_complexity Low_complexity 1 36 0 5 693 267 79 0 0 chr3R 14280328 14280366 -13624687 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 693 252 175 0 0 chr3R 14282279 14282342 -13622711 + (ACTG)n Simple_repeat Simple_repeat 4 66 0 5 693 262 203 14 0 chr3R 14283248 14283322 -13621731 + ROO_I LTR Pao 653 727 -7529 5 693 27 0 0 0 chr3R 14283696 14283723 -13621330 + AT_rich Low_complexity Low_complexity 1 27 0 5 693 261 57 0 0 chr3R 14285203 14285238 -13619815 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 693 261 265 0 0 chr3R 14285483 14285551 -13619502 - ROO_I LTR Pao -7518 738 671 5 693 186 43 0 0 chr3R 14286201 14286224 -13618829 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 5 694 194 116 0 23 chr3R 14287900 14287944 -13617109 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 5 694 211 220 0 0 chr3R 14288462 14288512 -13616541 + T-rich Low_complexity Low_complexity 1 50 0 5 694 23 0 0 0 chr3R 14291254 14291277 -13613776 + AT_rich Low_complexity Low_complexity 1 23 0 5 694 276 193 0 0 chr3R 14291290 14291347 -13613706 - DOC3_DM LINE Jockey -4170 570 514 5 694 234 91 0 0 chr3R 14291508 14291541 -13613512 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 694 21 36 0 0 chr3R 14292846 14292874 -13612179 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 208 167 21 0 chr3R 14293362 14293410 -13611643 + A-rich Low_complexity Low_complexity 2 50 0 5 694 26 30 0 0 chr3R 14293672 14293705 -13611348 + AT_rich Low_complexity Low_complexity 1 33 0 5 694 22 56 0 0 chr3R 14294090 14294126 -13610927 + AT_rich Low_complexity Low_complexity 1 36 0 5 694 26 82 0 0 chr3R 14294874 14294935 -13610118 + AT_rich Low_complexity Low_complexity 1 61 0 5 694 249 33 0 0 chr3R 14295555 14295585 -13609468 + (ATG)n Simple_repeat Simple_repeat 3 32 0 5 694 22 56 0 0 chr3R 14296096 14296132 -13608921 + AT_rich Low_complexity Low_complexity 1 36 0 5 694 22 0 0 0 chr3R 14296323 14296345 -13608708 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 204 214 0 35 chr3R 14297585 14297643 -13607410 + A-rich Low_complexity Low_complexity 3 58 0 5 694 25 0 0 0 chr3R 14298069 14298094 -13606959 + AT_rich Low_complexity Low_complexity 1 25 0 5 694 22 0 0 0 chr3R 14298433 14298455 -13606598 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 201 200 0 20 chr3R 14298610 14298661 -13606392 + A-rich Low_complexity Low_complexity 5 54 0 5 694 29 0 0 0 chr3R 14298957 14298986 -13606067 + AT_rich Low_complexity Low_complexity 1 29 0 5 694 237 277 30 0 chr3R 14299813 14299914 -13605139 + (CAG)n Simple_repeat Simple_repeat 3 106 0 5 694 233 213 0 0 chr3R 14300133 14300180 -13604873 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 694 21 0 0 0 chr3R 14301825 14301846 -13603207 + AT_rich Low_complexity Low_complexity 1 21 0 5 694 233 167 21 0 chr3R 14301867 14301915 -13603138 + (TTATA)n Simple_repeat Simple_repeat 4 52 0 5 694 210 37 0 0 chr3R 14302391 14302418 -13602635 + (CAG)n Simple_repeat Simple_repeat 2 28 0 5 694 276 30 0 0 chr3R 14304791 14304824 -13600229 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 694 214 200 12 70 chr3R 14306202 14306288 -13598765 + T-rich Low_complexity Low_complexity 4 84 0 5 694 244 232 0 42 chr3R 14306507 14306579 -13598474 + CT-rich Low_complexity Low_complexity 1 69 0 5 694 28 48 0 0 chr3R 14309580 14309622 -13595431 + AT_rich Low_complexity Low_complexity 1 42 0 5 694 22 0 0 0 chr3R 14311143 14311165 -13593888 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 240 255 0 18 chr3R 14311416 14311472 -13593581 + (CTGGGG)n Simple_repeat Simple_repeat 3 57 0 5 694 204 125 0 0 chr3R 14311740 14311772 -13593281 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 694 32 43 0 0 chr3R 14314644 14314690 -13590363 + AT_rich Low_complexity Low_complexity 1 46 0 5 694 28 86 0 0 chr3R 14314729 14314799 -13590254 + AT_rich Low_complexity Low_complexity 1 70 0 5 694 26 74 0 0 chr3R 14315485 14315539 -13589514 + AT_rich Low_complexity Low_complexity 1 54 0 5 694 21 36 0 0 chr3R 14315553 14315581 -13589472 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 29 0 0 0 chr3R 14315604 14315633 -13589420 + AT_rich Low_complexity Low_complexity 1 29 0 5 694 201 129 0 0 chr3R 14316021 14316052 -13589001 + (CATCC)n Simple_repeat Simple_repeat 5 35 0 5 694 27 47 0 45 chr3R 14316396 14316463 -13588590 + AT_rich Low_complexity Low_complexity 1 64 0 5 694 201 167 24 0 chr3R 14316642 14316684 -13588369 + (CAG)n Simple_repeat Simple_repeat 1 43 0 5 694 200 213 0 0 chr3R 14316707 14316754 -13588299 + (TTGG)n Simple_repeat Simple_repeat 3 49 0 5 694 27 29 0 0 chr3R 14320675 14320709 -13584344 + AT_rich Low_complexity Low_complexity 1 34 0 5 694 316 153 28 0 chr3R 14322873 14322945 -13582108 - ROO_I LTR Pao -7537 719 646 5 694 249 119 0 0 chr3R 14323713 14323755 -13581298 + (ACTG)n Simple_repeat Simple_repeat 2 43 0 5 694 210 274 0 52 chr3R 14323756 14323833 -13581220 + (CTGGGG)n Simple_repeat Simple_repeat 2 74 0 5 694 260 186 0 54 chr3R 14325615 14325689 -13579364 + (CTG)n Simple_repeat Simple_repeat 3 72 0 5 694 216 200 0 48 chr3R 14325891 14325954 -13579099 + (CAA)n Simple_repeat Simple_repeat 2 61 0 5 694 275 0 49 74 chr3R 14326482 14326563 -13578490 + (TA)n Simple_repeat Simple_repeat 2 80 0 5 694 34 0 0 0 chr3R 14327996 14328030 -13577023 + AT_rich Low_complexity Low_complexity 1 34 0 5 694 24 0 0 0 chr3R 14328116 14328140 -13576913 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 246 143 0 0 chr3R 14328328 14328377 -13576676 + (CAA)n Simple_repeat Simple_repeat 3 51 0 5 694 220 200 0 0 chr3R 14329881 14329931 -13575122 + (CTG)n Simple_repeat Simple_repeat 3 52 0 5 694 219 103 0 0 chr3R 14330443 14330482 -13574571 + (CACTC)n Simple_repeat Simple_repeat 4 42 0 5 694 24 0 0 0 chr3R 14333202 14333226 -13571827 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 24 0 0 0 chr3R 14336581 14336605 -13568448 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 245 272 0 36 chr3R 14340742 14340826 -13564227 + G-rich Low_complexity Low_complexity 1 81 0 5 694 23 0 0 0 chr3R 14342891 14342914 -13562139 + AT_rich Low_complexity Low_complexity 1 23 0 5 694 208 214 0 0 chr3R 14342946 14342988 -13562065 + (GCTG)n Simple_repeat Simple_repeat 3 44 0 5 694 30 93 0 0 chr3R 14343944 14344030 -13561023 + AT_rich Low_complexity Low_complexity 1 86 0 5 694 228 67 0 0 chr3R 14344327 14344357 -13560696 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 694 195 42 0 0 chr3R 14345872 14345896 -13559157 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 694 207 0 0 0 chr3R 14346190 14346213 -13558840 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 694 24 67 0 0 chr3R 14346794 14346839 -13558214 + AT_rich Low_complexity Low_complexity 1 45 0 5 694 231 36 0 0 chr3R 14348363 14348391 -13556662 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 694 34 0 0 0 chr3R 14350096 14350130 -13554923 + AT_rich Low_complexity Low_complexity 1 34 0 5 694 228 130 0 0 chr3R 14350396 14350442 -13554611 + (CAACT)n Simple_repeat Simple_repeat 1 46 0 5 694 22 94 0 0 chr3R 14351109 14351173 -13553880 + AT_rich Low_complexity Low_complexity 1 64 0 5 694 263 136 0 17 chr3R 14351684 14351744 -13553309 + (CAA)n Simple_repeat Simple_repeat 1 59 0 5 694 210 139 0 0 chr3R 14355896 14355932 -13549121 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 694 22 0 0 0 chr3R 14356574 14356596 -13548457 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 330 155 185 44 chr3R 14356983 14357118 -13547935 + DNAREP1_DM LINE Penelope 415 568 -26 5 694 183 80 0 0 chr3R 14357623 14357648 -13547405 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 694 180 77 0 0 chr3R 14365315 14365341 -13539712 + (GACTG)n Simple_repeat Simple_repeat 5 30 0 5 694 192 77 0 0 chr3R 14368158 14368184 -13536869 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 694 23 22 0 61 chr3R 14368876 14368925 -13536128 + AT_rich Low_complexity Low_complexity 1 46 0 5 694 32 0 0 0 chr3R 14370444 14370476 -13534577 + AT_rich Low_complexity Low_complexity 1 32 0 5 694 185 210 16 0 chr3R 14371394 14371456 -13533597 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 694 273 57 0 0 chr3R 14371574 14371609 -13533444 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 694 188 170 19 0 chr3R 14371842 14371895 -13533158 + CT-rich Low_complexity Low_complexity 2 55 0 5 694 22 0 0 0 chr3R 14371976 14371998 -13533055 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 252 0 0 0 chr3R 14372694 14372722 -13532331 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 694 30 77 0 0 chr3R 14373489 14373554 -13531499 + AT_rich Low_complexity Low_complexity 1 65 0 5 694 23 33 0 0 chr3R 14373932 14373962 -13531091 + AT_rich Low_complexity Low_complexity 1 30 0 5 694 330 98 0 0 chr3R 14374555 14374606 -13530447 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 694 27 49 0 0 chr3R 14375136 14375177 -13529876 + AT_rich Low_complexity Low_complexity 1 41 0 5 694 22 0 0 0 chr3R 14382079 14382101 -13522952 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 195 42 0 0 chr3R 14382541 14382565 -13522488 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 694 213 39 0 0 chr3R 14383819 14383845 -13521208 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 694 207 0 0 0 chr3R 14384755 14384778 -13520275 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 694 25 0 0 0 chr3R 14385112 14385137 -13519916 + AT_rich Low_complexity Low_complexity 1 25 0 5 694 21 57 0 0 chr3R 14385409 14385444 -13519609 + AT_rich Low_complexity Low_complexity 1 35 0 5 694 22 0 0 0 chr3R 14385590 14385612 -13519441 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 21 0 0 0 chr3R 14389088 14389109 -13515944 + AT_rich Low_complexity Low_complexity 1 21 0 5 694 28 0 0 0 chr3R 14389165 14389193 -13515860 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 27 0 0 0 chr3R 14389344 14389371 -13515682 + AT_rich Low_complexity Low_complexity 1 27 0 5 694 26 0 0 0 chr3R 14390017 14390043 -13515010 + AT_rich Low_complexity Low_complexity 1 26 0 5 694 189 0 0 0 chr3R 14392146 14392167 -13512886 + (A)n Simple_repeat Simple_repeat 1 21 0 5 694 200 176 0 0 chr3R 14392288 14392322 -13512731 + (TTCGG)n Simple_repeat Simple_repeat 4 37 0 5 694 201 39 0 0 chr3R 14394672 14394698 -13510355 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 694 183 42 0 0 chr3R 14396079 14396103 -13508950 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 694 22 80 0 0 chr3R 14396173 14396223 -13508830 + AT_rich Low_complexity Low_complexity 1 50 0 5 694 27 0 0 0 chr3R 14396797 14396824 -13508229 + AT_rich Low_complexity Low_complexity 1 27 0 5 694 26 30 0 0 chr3R 14398463 14398496 -13506557 + AT_rich Low_complexity Low_complexity 1 33 0 5 694 25 51 0 0 chr3R 14398551 14398590 -13506463 + AT_rich Low_complexity Low_complexity 1 39 0 5 694 205 157 37 56 chr3R 14398592 14398646 -13506407 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 5 694 28 0 0 0 chr3R 14407552 14407580 -13497473 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 24 0 0 0 chr3R 14408607 14408631 -13496422 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 195 42 0 0 chr3R 14410402 14410426 -13494627 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 694 204 40 0 0 chr3R 14411326 14411351 -13493702 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 694 254 73 24 0 chr3R 14414710 14414751 -13490302 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 694 21 71 0 0 chr3R 14415265 14415307 -13489746 + AT_rich Low_complexity Low_complexity 1 42 0 5 694 183 156 0 0 chr3R 14417346 14417378 -13487675 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 5 695 207 146 0 0 chr3R 14421217 14421258 -13483795 + (CTG)n Simple_repeat Simple_repeat 1 41 0 5 695 203 147 0 0 chr3R 14422842 14422876 -13482177 + (CTG)n Simple_repeat Simple_repeat 2 35 0 5 695 303 173 0 0 chr3R 14423265 14423346 -13481707 + (CTG)n Simple_repeat Simple_repeat 3 83 0 5 695 22 0 0 0 chr3R 14424321 14424343 -13480710 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 35 0 0 0 chr3R 14425867 14425902 -13479151 + AT_rich Low_complexity Low_complexity 1 35 0 5 695 186 71 0 0 chr3R 14426527 14426555 -13478498 + (GATTG)n Simple_repeat Simple_repeat 5 32 0 5 695 24 0 0 0 chr3R 14427016 14427040 -13478013 + AT_rich Low_complexity Low_complexity 1 24 0 5 695 236 211 19 0 chr3R 14431307 14431359 -13473694 + DNAREP1_DM LINE Penelope 35 87 -507 5 695 297 0 0 0 chr3R 14432277 14432310 -13472743 + (T)n Simple_repeat Simple_repeat 1 33 0 5 695 35765 1 0 0 chr3R 14432310 14436454 -13468599 - FW_DM LINE Jockey 0 4692 550 5 695 21 36 0 0 chr3R 14437398 14437426 -13467627 + AT_rich Low_complexity Low_complexity 1 28 0 5 695 24 0 0 0 chr3R 14439976 14440000 -13465053 + AT_rich Low_complexity Low_complexity 1 24 0 5 695 234 128 0 0 chr3R 14442472 14442511 -13462542 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 5 695 37 23 0 0 chr3R 14447725 14447769 -13457284 + AT_rich Low_complexity Low_complexity 1 44 0 5 695 21 0 0 0 chr3R 14453050 14453071 -13451982 + AT_rich Low_complexity Low_complexity 1 21 0 5 695 31 26 0 0 chr3R 14455641 14455679 -13449374 + AT_rich Low_complexity Low_complexity 1 38 0 5 695 308 263 30 10 chr3R 14457539 14457639 -13447414 + DNAREP1_DM LINE Penelope 339 440 -154 5 695 25 31 0 0 chr3R 14457954 14457986 -13447067 + AT_rich Low_complexity Low_complexity 1 32 0 5 695 25 0 0 0 chr3R 14458548 14458573 -13446480 + AT_rich Low_complexity Low_complexity 1 25 0 5 695 215 103 0 25 chr3R 14459438 14459478 -13445575 + (TTCGG)n Simple_repeat Simple_repeat 4 42 0 5 695 211 209 0 0 chr3R 14460970 14461013 -13444040 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 5 695 24 32 0 0 chr3R 14464496 14464527 -13440526 + AT_rich Low_complexity Low_complexity 1 31 0 5 695 210 37 0 0 chr3R 14465340 14465367 -13439686 + (ACCG)n Simple_repeat Simple_repeat 3 29 0 5 695 216 111 0 0 chr3R 14466578 14466614 -13438439 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 5 695 222 37 0 0 chr3R 14467078 14467105 -13437948 + (TAA)n Simple_repeat Simple_repeat 3 29 0 5 695 192 77 0 0 chr3R 14468811 14468837 -13436216 + (TATG)n Simple_repeat Simple_repeat 3 28 0 5 695 22 0 0 0 chr3R 14469921 14469943 -13435110 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 24 0 0 0 chr3R 14470688 14470712 -13434341 + AT_rich Low_complexity Low_complexity 1 24 0 5 695 31 68 0 0 chr3R 14474640 14474699 -13430354 + AT_rich Low_complexity Low_complexity 1 59 0 5 695 215 294 0 0 chr3R 14480828 14480920 -13424133 + CT-rich Low_complexity Low_complexity 2 93 0 5 695 183 80 0 0 chr3R 14481637 14481662 -13423391 + (CTG)n Simple_repeat Simple_repeat 3 27 0 5 695 210 224 0 0 chr3R 14481939 14481988 -13423065 + (CTG)n Simple_repeat Simple_repeat 1 49 0 5 695 205 128 43 0 chr3R 14484108 14484155 -13420898 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 695 221 167 0 0 chr3R 14484764 14484806 -13420247 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 695 235 169 68 0 chr3R 14495239 14495298 -13409755 + ROO_I LTR Pao 663 725 -7531 5 695 23 54 0 0 chr3R 14497745 14497782 -13407271 + AT_rich Low_complexity Low_complexity 1 37 0 5 695 27 0 0 0 chr3R 14498392 14498419 -13406634 + AT_rich Low_complexity Low_complexity 1 27 0 5 695 210 150 0 0 chr3R 14500617 14500657 -13404396 + (TTTTG)n Simple_repeat Simple_repeat 4 43 0 5 695 21 36 0 0 chr3R 14503466 14503494 -13401559 + AT_rich Low_complexity Low_complexity 1 28 0 5 695 247 333 0 0 chr3R 14505377 14505467 -13399586 + GA-rich Low_complexity Low_complexity 2 91 0 5 695 22 0 0 0 chr3R 14506604 14506626 -13398427 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 264 178 27 27 chr3R 14510958 14511033 -13394020 + A-rich Low_complexity Low_complexity 4 78 0 5 695 213 94 0 0 chr3R 14511239 14511271 -13393782 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 695 184 122 61 0 chr3R 14511296 14511345 -13393708 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 5 695 42 20 0 0 chr3R 14517619 14517668 -13387385 + AT_rich Low_complexity Low_complexity 1 49 0 5 695 203 61 0 29 chr3R 14524947 14524981 -13380072 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 695 183 100 0 0 chr3R 14525209 14525239 -13379814 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 695 207 125 0 0 chr3R 14525688 14525728 -13379325 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 695 22 0 0 0 chr3R 14526986 14527008 -13378045 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 212 153 0 92 chr3R 14528080 14528145 -13376908 + (GGGTG)n Simple_repeat Simple_repeat 3 61 0 5 695 23 0 0 0 chr3R 14531350 14531373 -13373680 + AT_rich Low_complexity Low_complexity 1 23 0 5 695 203 133 0 0 chr3R 14532236 14532266 -13372787 + (CGGAA)n Simple_repeat Simple_repeat 4 33 0 5 695 183 42 0 0 chr3R 14534907 14534931 -13370122 + (CTA)n Simple_repeat Simple_repeat 2 25 0 5 695 23 33 0 0 chr3R 14535121 14535151 -13369902 + AT_rich Low_complexity Low_complexity 1 30 0 5 695 189 0 0 0 chr3R 14535317 14535338 -13369715 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 695 221 143 0 45 chr3R 14536886 14536930 -13368123 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 5 695 249 83 0 0 chr3R 14538426 14538462 -13366591 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 695 222 313 0 0 chr3R 14540001 14540100 -13364953 + (CAG)n Simple_repeat Simple_repeat 1 99 0 5 695 267 103 0 0 chr3R 14540175 14540214 -13364839 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5 695 191 146 24 0 chr3R 14541088 14541129 -13363924 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 695 21 0 0 0 chr3R 14542553 14542574 -13362479 + AT_rich Low_complexity Low_complexity 1 21 0 5 695 25 31 0 0 chr3R 14542992 14543024 -13362029 + AT_rich Low_complexity Low_complexity 1 32 0 5 695 33 0 0 0 chr3R 14543183 14543216 -13361837 + AT_rich Low_complexity Low_complexity 1 33 0 5 695 182 143 20 0 chr3R 14544512 14544561 -13360492 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 695 32 75 0 0 chr3R 14546727 14546794 -13358259 + AT_rich Low_complexity Low_complexity 1 67 0 5 695 307 213 0 0 chr3R 14548410 14548471 -13356582 + PROTOP_B DNA P 137 197 -956 5 696 305 93 0 0 chr3R 14548997 14549040 -13356013 + PROTOP_B DNA P 1111 1153 0 5 696 235 341 0 0 chr3R 14551572 14551660 -13353393 + (TGG)n Simple_repeat Simple_repeat 3 90 0 5 696 21 36 0 0 chr3R 14555286 14555314 -13349739 + AT_rich Low_complexity Low_complexity 1 28 0 5 696 208 143 0 0 chr3R 14556900 14556935 -13348118 + (A)n Simple_repeat Simple_repeat 1 35 0 5 696 247 49 49 0 chr3R 14557421 14557462 -13347591 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 696 26 0 0 0 chr3R 14558316 14558342 -13346711 + AT_rich Low_complexity Low_complexity 1 26 0 5 696 21 0 0 0 chr3R 14563684 14563705 -13341348 + AT_rich Low_complexity Low_complexity 1 21 0 5 696 29 28 0 0 chr3R 14571811 14571847 -13333206 + AT_rich Low_complexity Low_complexity 1 36 0 5 696 240 35 0 0 chr3R 14587225 14587254 -13317799 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 696 28 29 0 0 chr3R 14587861 14587896 -13317157 + AT_rich Low_complexity Low_complexity 1 35 0 5 696 183 100 0 0 chr3R 14589792 14589822 -13315231 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 696 189 0 0 0 chr3R 14590090 14590111 -13314942 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 696 231 36 0 0 chr3R 14592007 14592035 -13313018 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 696 235 195 0 0 chr3R 14594263 14594304 -13310749 + (CTTCG)n Simple_repeat Simple_repeat 2 42 0 5 696 189 74 0 0 chr3R 14598912 14598939 -13306114 + (T)n Simple_repeat Simple_repeat 1 27 0 5 696 28 0 0 0 chr3R 14600685 14600713 -13304340 + AT_rich Low_complexity Low_complexity 1 28 0 5 696 225 213 37 74 chr3R 14604167 14604248 -13300805 + BS LINE Jockey 2044 2121 -3005 5 696 207 0 0 0 chr3R 14604558 14604581 -13300472 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 696 23 0 0 0 chr3R 14605039 14605062 -13299991 + AT_rich Low_complexity Low_complexity 1 23 0 5 696 264 59 0 0 chr3R 14605525 14605559 -13299494 + (ATG)n Simple_repeat Simple_repeat 2 35 0 5 696 23 33 0 0 chr3R 14609285 14609315 -13295738 + AT_rich Low_complexity Low_complexity 1 30 0 5 696 22 0 0 0 chr3R 14611176 14611198 -13293855 + AT_rich Low_complexity Low_complexity 1 22 0 5 696 183 129 0 0 chr3R 14611415 14611446 -13293607 + (GCTG)n Simple_repeat Simple_repeat 3 33 0 5 696 222 37 0 0 chr3R 14612428 14612455 -13292598 + (CTG)n Simple_repeat Simple_repeat 2 28 0 5 696 198 174 0 0 chr3R 14613896 14613942 -13291111 + (CACCAT)n Simple_repeat Simple_repeat 3 48 0 5 696 24 32 0 0 chr3R 14618347 14618378 -13286675 + AT_rich Low_complexity Low_complexity 1 31 0 5 696 191 88 0 29 chr3R 14619460 14619495 -13285558 + (AAATG)n Simple_repeat Simple_repeat 3 36 0 5 696 231 61 0 0 chr3R 14620647 14620680 -13284373 + (TAA)n Simple_repeat Simple_repeat 2 34 0 5 696 230 206 15 45 chr3R 14624555 14624621 -13280432 + PROTOP_A DNA P 145 208 -897 5 696 201 94 0 0 chr3R 14626448 14626480 -13278573 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 5 696 22 0 0 0 chr3R 14626651 14626673 -13278380 + AT_rich Low_complexity Low_complexity 1 22 0 5 696 269 131 16 0 chr3R 14627026 14627087 -13277966 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 696 189 0 0 0 chr3R 14627480 14627501 -13277552 + (TCG)n Simple_repeat Simple_repeat 2 22 0 5 696 243 61 0 0 chr3R 14629260 14629293 -13275760 + (TTG)n Simple_repeat Simple_repeat 1 33 0 5 696 324 138 0 0 chr3R 14630173 14630238 -13274815 + (ACTG)n Simple_repeat Simple_repeat 1 65 0 5 696 29 0 0 0 chr3R 14630872 14630901 -13274152 + AT_rich Low_complexity Low_complexity 1 29 0 5 696 203 147 0 0 chr3R 14631301 14631335 -13273718 + (CGAAA)n Simple_repeat Simple_repeat 2 35 0 5 696 276 30 0 0 chr3R 14632199 14632232 -13272821 + (CTG)n Simple_repeat Simple_repeat 1 33 0 5 696 21 57 0 0 chr3R 14633212 14633247 -13271806 + AT_rich Low_complexity Low_complexity 1 35 0 5 696 23 0 0 0 chr3R 14635458 14635481 -13269572 + AT_rich Low_complexity Low_complexity 1 23 0 5 696 198 0 0 0 chr3R 14638947 14638969 -13266084 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 696 28 71 0 0 chr3R 14639109 14639165 -13265888 + AT_rich Low_complexity Low_complexity 1 56 0 5 696 312 27 0 0 chr3R 14641859 14641896 -13263157 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 696 33 43 0 0 chr3R 14642277 14642324 -13262729 + AT_rich Low_complexity Low_complexity 1 47 0 5 696 202 200 0 0 chr3R 14642766 14642811 -13262242 + (TGGG)n Simple_repeat Simple_repeat 2 46 0 5 696 35 0 0 0 chr3R 14643996 14644031 -13261022 + AT_rich Low_complexity Low_complexity 1 35 0 5 696 234 81 0 0 chr3R 14645309 14645346 -13259707 + (TCC)n Simple_repeat Simple_repeat 3 39 0 5 696 180 111 0 0 chr3R 14648582 14648609 -13256444 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 696 22 0 0 0 chr3R 14648923 14648945 -13256108 + AT_rich Low_complexity Low_complexity 1 22 0 5 696 183 80 0 0 chr3R 14651211 14651236 -13253817 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 696 186 43 0 0 chr3R 14651821 14651844 -13253209 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 696 276 225 38 0 chr3R 14652690 14652770 -13252283 + ROO_I LTR Pao 644 726 -7530 5 696 26 50 0 0 chr3R 14654337 14654377 -13250676 + AT_rich Low_complexity Low_complexity 1 40 0 5 696 27 0 0 0 chr3R 14658777 14658804 -13246249 + AT_rich Low_complexity Low_complexity 1 27 0 5 696 210 250 0 59 chr3R 14660852 14660954 -13244099 + A-rich Low_complexity Low_complexity 6 101 0 5 696 212 167 0 0 chr3R 14662945 14662987 -13242066 + T-rich Low_complexity Low_complexity 1 42 0 5 696 26 0 0 0 chr3R 14663758 14663784 -13241269 + AT_rich Low_complexity Low_complexity 1 26 0 5 696 29 47 0 0 chr3R 14667527 14667570 -13237483 + AT_rich Low_complexity Low_complexity 1 43 0 5 696 192 152 0 0 chr3R 14670528 14670561 -13234492 + (CGA)n Simple_repeat Simple_repeat 1 33 0 5 696 210 37 0 0 chr3R 14671986 14672013 -13233040 + (CAGT)n Simple_repeat Simple_repeat 3 29 0 5 696 281 68 0 22 chr3R 14675113 14675158 -13229895 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 696 25 0 0 0 chr3R 14675709 14675734 -13229319 + AT_rich Low_complexity Low_complexity 1 25 0 5 696 21 0 0 0 chr3R 14677806 14677827 -13227226 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 22 0 0 0 chr3R 14681141 14681163 -13223890 + AT_rich Low_complexity Low_complexity 1 22 0 5 697 25 31 0 0 chr3R 14681654 14681686 -13223367 + AT_rich Low_complexity Low_complexity 1 32 0 5 697 27 29 0 0 chr3R 14685763 14685797 -13219256 + AT_rich Low_complexity Low_complexity 1 34 0 5 697 22 56 0 0 chr3R 14688282 14688318 -13216735 + AT_rich Low_complexity Low_complexity 1 36 0 5 697 211 216 0 0 chr3R 14689872 14689923 -13215130 + A-rich Low_complexity Low_complexity 1 51 0 5 697 224 130 22 0 chr3R 14693852 14693898 -13211155 + (GCTTG)n Simple_repeat Simple_repeat 3 49 0 5 697 204 40 0 0 chr3R 14696799 14696824 -13208229 + (T)n Simple_repeat Simple_repeat 1 25 0 5 697 34 42 0 0 chr3R 14697752 14697800 -13207253 + AT_rich Low_complexity Low_complexity 1 48 0 5 697 23 68 0 0 chr3R 14697909 14697953 -13207100 + AT_rich Low_complexity Low_complexity 1 44 0 5 697 267 122 0 0 chr3R 14698340 14698389 -13206664 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 697 27 62 0 0 chr3R 14698931 14698979 -13206074 + AT_rich Low_complexity Low_complexity 1 48 0 5 697 21 0 0 0 chr3R 14699390 14699411 -13205642 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 219 170 0 60 chr3R 14699830 14699880 -13205173 + T-rich Low_complexity Low_complexity 2 48 0 5 697 24 0 0 0 chr3R 14702891 14702915 -13202138 + AT_rich Low_complexity Low_complexity 1 24 0 5 697 209 108 0 26 chr3R 14703131 14703169 -13201884 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 5 697 226 191 21 0 chr3R 14705958 14706005 -13199048 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 697 25 0 0 0 chr3R 14706501 14706526 -13198527 + AT_rich Low_complexity Low_complexity 1 25 0 5 697 189 74 0 0 chr3R 14706792 14706819 -13198234 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 697 215 135 0 26 chr3R 14706999 14707037 -13198016 + CT-rich Low_complexity Low_complexity 2 38 0 5 697 30 0 0 0 chr3R 14707355 14707385 -13197668 + AT_rich Low_complexity Low_complexity 1 30 0 5 697 22 35 0 0 chr3R 14708804 14708833 -13196220 + AT_rich Low_complexity Low_complexity 1 29 0 5 697 300 143 0 0 chr3R 14709029 14709085 -13195968 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 697 23 33 0 0 chr3R 14710676 14710706 -13194347 + AT_rich Low_complexity Low_complexity 1 30 0 5 697 237 163 0 0 chr3R 14712785 14712834 -13192219 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 697 297 131 0 0 chr3R 14713342 14713403 -13191650 + (CAGT)n Simple_repeat Simple_repeat 3 63 0 5 697 21 0 0 0 chr3R 14713679 14713700 -13191353 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 21 0 0 0 chr3R 14718662 14718683 -13186370 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 210 37 0 0 chr3R 14719393 14719420 -13185633 + (TCC)n Simple_repeat Simple_repeat 2 28 0 5 697 23 68 0 0 chr3R 14719862 14719906 -13185147 + AT_rich Low_complexity Low_complexity 1 44 0 5 697 186 43 0 0 chr3R 14720184 14720207 -13184846 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 697 27 29 0 0 chr3R 14721088 14721122 -13183931 + AT_rich Low_complexity Low_complexity 1 34 0 5 697 186 191 0 0 chr3R 14722786 14722828 -13182225 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 697 203 175 0 0 chr3R 14729165 14729205 -13175848 + T-rich Low_complexity Low_complexity 1 40 0 5 697 183 139 0 0 chr3R 14729764 14729800 -13175253 + (CGAAT)n Simple_repeat Simple_repeat 4 39 0 5 697 25 31 0 0 chr3R 14730286 14730318 -13174735 + AT_rich Low_complexity Low_complexity 1 32 0 5 697 189 0 0 0 chr3R 14730594 14730615 -13174438 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 697 38 51 0 0 chr3R 14732099 14732158 -13172895 + AT_rich Low_complexity Low_complexity 1 59 0 5 697 246 164 0 0 chr3R 14732783 14732838 -13172215 + (CAGC)n Simple_repeat Simple_repeat 1 55 0 5 697 225 83 0 0 chr3R 14734256 14734292 -13170761 + (CAG)n Simple_repeat Simple_repeat 3 38 0 5 697 256 212 68 0 chr3R 14735138 14735256 -13169797 + (TA)n Simple_repeat Simple_repeat 1 126 0 5 697 214 269 21 31 chr3R 14735584 14735680 -13169373 + (CATATA)n Simple_repeat Simple_repeat 1 95 0 5 697 26 0 0 0 chr3R 14736047 14736073 -13168980 + AT_rich Low_complexity Low_complexity 1 26 0 5 697 32 43 0 0 chr3R 14736792 14736838 -13168215 + AT_rich Low_complexity Low_complexity 1 46 0 5 697 21 36 0 0 chr3R 14740209 14740237 -13164816 + AT_rich Low_complexity Low_complexity 1 28 0 5 697 207 100 0 0 chr3R 14741119 14741149 -13163904 + (A)n Simple_repeat Simple_repeat 1 30 0 5 697 204 40 0 0 chr3R 14743045 14743070 -13161983 + (CATA)n Simple_repeat Simple_repeat 2 26 0 5 697 2769 44 10 10 chr3R 14743160 14743547 -13161506 + S2_DM DNA Tc1 1331 1717 -18 5 697 195 188 0 0 chr3R 14745335 14745383 -13159670 + A-rich Low_complexity Low_complexity 1 48 0 5 697 227 341 0 0 chr3R 14745481 14745616 -13159437 + A-rich Low_complexity Low_complexity 1 135 0 5 697 245 240 0 0 chr3R 14746599 14746649 -13158404 + (CAG)n Simple_repeat Simple_repeat 2 51 0 5 697 203 156 0 0 chr3R 14747601 14747633 -13157420 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 697 600 93 50 40 chr3R 14747775 14747876 -13157177 + PROTOP_A DNA P 1 102 -1003 5 697 551 192 170 7 chr3R 14747871 14748018 -13157035 + PROTOP_A DNA P 862 1036 -69 5 697 270 81 0 0 chr3R 14750216 14750253 -13154800 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 697 21 0 0 0 chr3R 14750304 14750325 -13154728 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 22 35 0 0 chr3R 14750606 14750635 -13154418 + AT_rich Low_complexity Low_complexity 1 29 0 5 697 214 186 0 0 chr3R 14754123 14754166 -13150887 + (TTG)n Simple_repeat Simple_repeat 2 44 0 5 697 28 29 0 0 chr3R 14754543 14754578 -13150475 + AT_rich Low_complexity Low_complexity 1 35 0 5 697 29 47 0 0 chr3R 14754655 14754698 -13150355 + AT_rich Low_complexity Low_complexity 1 43 0 5 697 186 43 0 0 chr3R 14755344 14755367 -13149686 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 697 302 159 0 14 chr3R 14755459 14755529 -13149524 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 697 204 209 0 0 chr3R 14757584 14757627 -13147426 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 697 22 56 0 0 chr3R 14759214 14759250 -13145803 + AT_rich Low_complexity Low_complexity 1 36 0 5 697 227 203 16 0 chr3R 14759555 14759619 -13145434 + (CAG)n Simple_repeat Simple_repeat 1 65 0 5 697 28 86 0 0 chr3R 14759989 14760059 -13144994 + AT_rich Low_complexity Low_complexity 1 70 0 5 697 249 148 49 0 chr3R 14760181 14760242 -13144811 - ROO_I LTR Pao -7558 698 635 5 697 234 0 0 0 chr3R 14760529 14760555 -13144498 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 697 227 227 30 0 chr3R 14760711 14760777 -13144276 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 697 29 78 0 0 chr3R 14761800 14761864 -13143189 + AT_rich Low_complexity Low_complexity 1 64 0 5 697 225 119 0 0 chr3R 14761940 14761982 -13143071 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 697 206 62 31 0 chr3R 14763679 14763711 -13141342 + (TTCG)n Simple_repeat Simple_repeat 4 36 0 5 697 246 62 0 0 chr3R 14764999 14765031 -13140022 + (CTG)n Simple_repeat Simple_repeat 3 34 0 5 697 21 57 0 0 chr3R 14765447 14765482 -13139571 + AT_rich Low_complexity Low_complexity 1 35 0 5 697 21 36 0 0 chr3R 14766620 14766648 -13138405 + AT_rich Low_complexity Low_complexity 1 28 0 5 697 180 0 0 0 chr3R 14769917 14769937 -13135116 + (CTG)n Simple_repeat Simple_repeat 3 22 0 5 697 21 0 0 0 chr3R 14770342 14770363 -13134690 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 22 56 0 0 chr3R 14771515 14771551 -13133502 + AT_rich Low_complexity Low_complexity 1 36 0 5 697 247 115 0 147 chr3R 14773194 14773296 -13131757 + ROO_I LTR Pao 643 729 -7527 5 697 27 0 0 0 chr3R 14774376 14774403 -13130650 + AT_rich Low_complexity Low_complexity 1 27 0 5 697 237 119 0 0 chr3R 14780209 14780251 -13124802 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 697 25 0 0 0 chr3R 14780771 14780796 -13124257 + AT_rich Low_complexity Low_complexity 1 25 0 5 697 189 0 0 0 chr3R 14781038 14781059 -13123994 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 697 22 0 0 0 chr3R 14781929 14781951 -13123102 + AT_rich Low_complexity Low_complexity 1 22 0 5 697 26 0 0 0 chr3R 14782507 14782533 -13122520 + AT_rich Low_complexity Low_complexity 1 26 0 5 697 200 200 0 0 chr3R 14784425 14784465 -13120588 + GA-rich Low_complexity Low_complexity 3 42 0 5 697 240 59 0 0 chr3R 14784468 14784502 -13120551 + (GAGTG)n Simple_repeat Simple_repeat 3 36 0 5 697 246 81 0 0 chr3R 14784761 14784798 -13120255 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 697 24 0 0 0 chr3R 14785581 14785605 -13119448 + AT_rich Low_complexity Low_complexity 1 24 0 5 697 288 0 0 0 chr3R 14787740 14787772 -13117281 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 697 186 71 0 0 chr3R 14787912 14787940 -13117113 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 697 26 74 0 0 chr3R 14789361 14789415 -13115638 + AT_rich Low_complexity Low_complexity 1 54 0 5 697 276 53 0 0 chr3R 14790052 14790090 -13114963 + (CAT)n Simple_repeat Simple_repeat 3 40 0 5 697 207 0 0 0 chr3R 14793911 14793934 -13111119 + (TAGA)n Simple_repeat Simple_repeat 3 25 0 5 697 201 189 38 0 chr3R 14794329 14794382 -13110671 + (CCCA)n Simple_repeat Simple_repeat 2 56 0 5 697 22 35 0 0 chr3R 14794775 14794804 -13110249 + AT_rich Low_complexity Low_complexity 1 29 0 5 697 25 51 0 0 chr3R 14797465 14797504 -13107549 + AT_rich Low_complexity Low_complexity 1 39 0 5 697 245 229 0 16 chr3R 14799510 14799572 -13105481 + CT-rich Low_complexity Low_complexity 2 62 0 5 697 26 50 0 0 chr3R 14803975 14804015 -13101038 + AT_rich Low_complexity Low_complexity 1 40 0 5 697 207 0 0 0 chr3R 14806992 14807015 -13098038 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 697 22 0 0 0 chr3R 14809475 14809497 -13095556 + AT_rich Low_complexity Low_complexity 1 22 0 5 698 241 273 0 0 chr3R 14815049 14815115 -13089938 + (CAG)n Simple_repeat Simple_repeat 3 68 0 5 698 252 59 0 0 chr3R 14815151 14815185 -13089868 + (TTCG)n Simple_repeat Simple_repeat 1 34 0 5 698 225 167 0 0 chr3R 14816686 14816728 -13088325 + GA-rich Low_complexity Low_complexity 1 42 0 5 698 252 0 0 0 chr3R 14824620 14824648 -13080405 + (ACTCG)n Simple_repeat Simple_repeat 2 29 0 5 698 183 80 0 0 chr3R 14826445 14826470 -13078583 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 5 698 201 133 0 0 chr3R 14827669 14827699 -13077354 + (ACTCG)n Simple_repeat Simple_repeat 5 34 0 5 698 195 42 0 0 chr3R 14835633 14835657 -13069396 + (TCG)n Simple_repeat Simple_repeat 2 25 0 5 698 183 80 0 0 chr3R 14835800 14835825 -13069228 + (CGA)n Simple_repeat Simple_repeat 1 25 0 5 698 28 0 0 0 chr3R 14840734 14840762 -13064291 + AT_rich Low_complexity Low_complexity 1 28 0 5 698 252 143 0 0 chr3R 14841291 14841347 -13063706 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 698 210 91 0 0 chr3R 14843329 14843362 -13061691 + (CAA)n Simple_repeat Simple_repeat 3 35 0 5 698 21 36 0 0 chr3R 14849676 14849704 -13055349 + AT_rich Low_complexity Low_complexity 1 28 0 5 698 23 33 0 0 chr3R 14852942 14852972 -13052081 + AT_rich Low_complexity Low_complexity 1 30 0 5 698 23 0 0 0 chr3R 14858110 14858133 -13046920 + AT_rich Low_complexity Low_complexity 1 23 0 5 698 242 56 28 0 chr3R 14861177 14861213 -13043840 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 698 189 94 0 0 chr3R 14861409 14861441 -13043612 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 5 698 29 0 0 0 chr3R 14862450 14862479 -13042574 + AT_rich Low_complexity Low_complexity 1 29 0 5 698 335 185 0 89 chr3R 14866392 14866493 -13038560 + ROO_I LTR Pao 648 739 -7517 5 698 302 229 0 48 chr3R 14866541 14866665 -13038388 + ROO_I LTR Pao 626 743 -7513 5 698 24 32 0 0 chr3R 14877809 14877840 -13027213 + AT_rich Low_complexity Low_complexity 1 31 0 5 698 279 114 0 0 chr3R 14879546 14879590 -13025463 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 698 284 224 66 0 chr3R 14879916 14879992 -13025061 + ROO_I LTR Pao 651 731 -7525 5 698 224 200 0 0 chr3R 14881579 14881624 -13023429 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 698 237 65 0 0 chr3R 14882140 14882171 -13022882 + (CATAC)n Simple_repeat Simple_repeat 3 33 0 5 698 270 0 0 0 chr3R 14883945 14883975 -13021078 + (CTAA)n Simple_repeat Simple_repeat 1 30 0 5 698 204 40 0 0 chr3R 14885852 14885877 -13019176 + (CATA)n Simple_repeat Simple_repeat 3 27 0 5 698 200 233 0 0 chr3R 14886169 14886212 -13018841 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 698 201 171 0 0 chr3R 14887662 14887697 -13017356 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 698 216 111 0 0 chr3R 14887719 14887755 -13017298 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 5 698 22 35 0 0 chr3R 14888455 14888484 -13016569 + AT_rich Low_complexity Low_complexity 1 29 0 5 698 213 39 0 0 chr3R 14889357 14889383 -13015670 + (TCG)n Simple_repeat Simple_repeat 3 28 0 5 698 223 180 49 0 chr3R 14892100 14892161 -13012892 + T-rich Low_complexity Low_complexity 2 65 0 5 698 236 203 34 0 chr3R 14892312 14892371 -13012682 + ROO_I LTR Pao 667 727 -7529 5 698 198 91 0 0 chr3R 14893844 14893877 -13011176 + (A)n Simple_repeat Simple_repeat 1 33 0 5 698 186 167 0 0 chr3R 14893958 14893994 -13011059 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 698 246 143 0 0 chr3R 14894495 14894544 -13010509 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 698 180 0 0 0 chr3R 14895137 14895157 -13009896 + (CAA)n Simple_repeat Simple_repeat 1 20 0 5 698 240 35 0 0 chr3R 14896004 14896033 -13009020 + (CAGC)n Simple_repeat Simple_repeat 3 31 0 5 698 252 259 25 0 chr3R 14897736 14897817 -13007236 + (TGGA)n Simple_repeat Simple_repeat 2 84 0 5 698 25 0 0 0 chr3R 14898333 14898358 -13006695 + AT_rich Low_complexity Low_complexity 1 25 0 5 698 186 43 0 0 chr3R 14899129 14899152 -13005901 + (TCG)n Simple_repeat Simple_repeat 2 24 0 5 698 243 173 0 0 chr3R 14899465 14899517 -13005536 + (CAATT)n Simple_repeat Simple_repeat 5 56 0 5 698 234 192 58 0 chr3R 14901199 14901251 -13003802 + DOC3_DM LINE Jockey 513 567 -4173 5 698 22 0 0 0 chr3R 14906412 14906434 -12998619 + AT_rich Low_complexity Low_complexity 1 22 0 5 698 27 29 0 0 chr3R 14908208 14908242 -12996811 + AT_rich Low_complexity Low_complexity 1 34 0 5 698 24 0 0 0 chr3R 14908703 14908727 -12996326 + AT_rich Low_complexity Low_complexity 1 24 0 5 698 201 74 0 0 chr3R 14909343 14909370 -12995683 + (CAA)n Simple_repeat Simple_repeat 1 27 0 5 698 339 65 0 0 chr3R 14909543 14909589 -12995464 + (CTG)n Simple_repeat Simple_repeat 3 48 0 5 698 201 167 0 0 chr3R 14910094 14910130 -12994923 + A-rich Low_complexity Low_complexity 1 36 0 5 698 202 217 0 0 chr3R 14911329 14911375 -12993678 + (GAATG)n Simple_repeat Simple_repeat 1 46 0 5 698 203 32 0 61 chr3R 14912225 14912258 -12992795 + (CATCG)n Simple_repeat Simple_repeat 1 31 0 5 698 25 0 0 0 chr3R 14915943 14915968 -12989085 + AT_rich Low_complexity Low_complexity 1 25 0 5 698 23 33 0 0 chr3R 14916438 14916468 -12988585 + AT_rich Low_complexity Low_complexity 1 30 0 5 698 180 97 0 0 chr3R 14916948 14916979 -12988074 + (CAT)n Simple_repeat Simple_repeat 1 31 0 5 698 203 224 20 0 chr3R 14921939 14921988 -12983065 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 5 698 23 0 0 0 chr3R 14924124 14924147 -12980906 + AT_rich Low_complexity Low_complexity 1 23 0 5 698 21 0 0 0 chr3R 14925157 14925178 -12979875 + AT_rich Low_complexity Low_complexity 1 21 0 5 698 348 94 0 0 chr3R 14925243 14925296 -12979757 + (CATAC)n Simple_repeat Simple_repeat 5 57 0 5 698 204 40 0 0 chr3R 14931108 14931133 -12973920 + (T)n Simple_repeat Simple_repeat 1 25 0 5 698 255 56 28 0 chr3R 14932595 14932631 -12972422 - PROTOP_B DNA P -612 541 505 5 698 207 176 0 0 chr3R 14937173 14937207 -12967846 + (CAGTC)n Simple_repeat Simple_repeat 3 36 0 5 698 208 241 0 33 chr3R 14938254 14938314 -12966739 + (CAAGC)n Simple_repeat Simple_repeat 4 61 0 5 698 466 75 45 0 chr3R 14939650 14939717 -12965336 - DNAREP1_DM LINE Penelope 0 594 525 5 698 435 235 0 10 chr3R 14939779 14939878 -12965175 - DNAREP1_DM LINE Penelope -495 99 2 5 698 225 65 0 0 chr3R 14941932 14941963 -12963090 + (CTG)n Simple_repeat Simple_repeat 2 32 0 5 698 226 277 0 15 chr3R 14942057 14942123 -12962930 + (CAG)n Simple_repeat Simple_repeat 3 67 0 5 699 287 185 0 0 chr3R 14944274 14944328 -12960725 + DNAREP1_DM LINE Penelope 1 54 -540 5 699 242 223 131 8 chr3R 14944542 14944664 -12960389 - ROO_I LTR Pao -7518 738 602 5 699 297 148 36 24 chr3R 14945516 14945599 -12959454 - ROO_I LTR Pao -7529 727 644 5 699 214 282 0 13 chr3R 14952069 14952148 -12952905 + (CAG)n Simple_repeat Simple_repeat 2 79 0 5 699 22 0 0 0 chr3R 14953848 14953870 -12951183 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 261 0 0 0 chr3R 14954193 14954222 -12950831 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 699 319 149 0 0 chr3R 14954386 14954433 -12950620 - HOBO DNA hAT -72 2944 2898 5 699 267 81 0 0 chr3R 14954447 14954484 -12950569 - HOBO DNA hAT -244 2772 2736 5 699 32 67 0 0 chr3R 14954497 14954557 -12950496 + AT_rich Low_complexity Low_complexity 1 60 0 5 699 21 57 0 0 chr3R 14960701 14960736 -12944317 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 15687 2 3 10 chr3R 14962846 14964586 -12940467 + BARI_DM DNA Tc1 1 1728 0 5 699 220 196 0 0 chr3R 14964838 14964884 -12940169 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 5 699 243 88 0 0 chr3R 14965143 14965177 -12939876 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 699 186 246 0 0 chr3R 14968581 14968642 -12936411 + (CGGA)n Simple_repeat Simple_repeat 1 61 0 5 699 329 127 0 18 chr3R 14971834 14971890 -12933163 - DNAREP1_DM LINE Penelope 0 594 540 5 699 304 303 22 0 chr3R 14971892 14971981 -12933072 - DNAREP1_DM LINE Penelope -136 458 368 5 699 245 192 77 0 chr3R 14972022 14972074 -12932979 - DNAREP1_DM LINE Penelope -538 56 1 5 699 180 143 0 0 chr3R 14977081 14977123 -12927930 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 5 699 34 24 0 0 chr3R 14977732 14977773 -12927280 + AT_rich Low_complexity Low_complexity 1 41 0 5 699 21 57 0 0 chr3R 14982840 14982875 -12922178 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 422 49 16 0 chr3R 14985709 14985770 -12919283 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 699 31 0 0 0 chr3R 14985821 14985852 -12919201 + AT_rich Low_complexity Low_complexity 1 31 0 5 699 22 0 0 0 chr3R 14988473 14988495 -12916558 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 36 53 0 0 chr3R 14988927 14988984 -12916069 + AT_rich Low_complexity Low_complexity 1 57 0 5 699 29 47 0 0 chr3R 14989180 14989223 -12915830 + AT_rich Low_complexity Low_complexity 1 43 0 5 699 26 74 0 0 chr3R 14989335 14989389 -12915664 + AT_rich Low_complexity Low_complexity 1 54 0 5 699 23 0 0 0 chr3R 14991106 14991129 -12913924 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 203 267 0 0 chr3R 14991677 14991737 -12913316 + T-rich Low_complexity Low_complexity 1 60 0 5 699 25 0 0 0 chr3R 14992593 14992618 -12912435 + AT_rich Low_complexity Low_complexity 1 25 0 5 699 210 136 0 0 chr3R 14993993 14994037 -12911016 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 699 198 71 0 0 chr3R 14995060 14995088 -12909965 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 699 254 148 0 47 chr3R 14995202 14995266 -12909787 + (CAG)n Simple_repeat Simple_repeat 1 61 0 5 699 39 22 0 0 chr3R 14996057 14996103 -12908950 + AT_rich Low_complexity Low_complexity 1 46 0 5 699 21 0 0 0 chr3R 14997236 14997257 -12907796 + AT_rich Low_complexity Low_complexity 1 21 0 5 699 23 0 0 0 chr3R 15007874 15007897 -12897156 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 225 0 0 0 chr3R 15010134 15010159 -12894894 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 699 43 35 0 0 chr3R 15010602 15010659 -12894394 + AT_rich Low_complexity Low_complexity 1 57 0 5 699 192 77 0 0 chr3R 15011565 15011591 -12893462 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 5 699 205 176 0 0 chr3R 15015073 15015107 -12889946 + (CACCAT)n Simple_repeat Simple_repeat 2 35 0 5 699 207 317 10 0 chr3R 15015606 15015710 -12889343 + (CACCAT)n Simple_repeat Simple_repeat 3 107 0 5 699 208 361 0 0 chr3R 15015734 15015795 -12889258 + (CGG)n Simple_repeat Simple_repeat 1 61 0 5 699 480 77 0 0 chr3R 15015947 15016012 -12889041 + (CAG)n Simple_repeat Simple_repeat 1 65 0 5 699 39043 2 0 0 chr3R 15018757 15022995 -12882058 + FW_DM LINE Jockey 455 4692 0 5 699 26 0 0 0 chr3R 15023750 15023776 -12881277 + AT_rich Low_complexity Low_complexity 1 26 0 5 699 261 111 0 0 chr3R 15023925 15023961 -12881092 - DNAREP1_DM LINE Penelope -133 461 426 5 699 195 42 0 0 chr3R 15024951 15024975 -12880078 + (CATA)n Simple_repeat Simple_repeat 4 27 0 5 699 21 57 0 0 chr3R 15025280 15025315 -12879738 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 24 0 0 0 chr3R 15026455 15026479 -12878574 + AT_rich Low_complexity Low_complexity 1 24 0 5 699 23 33 0 0 chr3R 15029388 15029418 -12875635 + AT_rich Low_complexity Low_complexity 1 30 0 5 699 186 103 0 0 chr3R 15029710 15029739 -12875314 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 699 180 0 0 0 chr3R 15033652 15033672 -12871381 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 699 21 36 0 0 chr3R 15035229 15035257 -12869796 + AT_rich Low_complexity Low_complexity 1 28 0 5 699 243 0 0 0 chr3R 15036543 15036570 -12868483 + (CTG)n Simple_repeat Simple_repeat 1 27 0 5 699 195 42 0 0 chr3R 15037436 15037460 -12867593 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 699 26 50 0 0 chr3R 15038357 15038397 -12866656 + AT_rich Low_complexity Low_complexity 1 40 0 5 699 26 30 0 0 chr3R 15039148 15039181 -12865872 + AT_rich Low_complexity Low_complexity 1 33 0 5 699 22 0 0 0 chr3R 15040821 15040843 -12864210 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 23 0 0 0 chr3R 15041151 15041174 -12863879 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 23 0 0 0 chr3R 15041314 15041337 -12863716 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 183 129 0 0 chr3R 15043515 15043546 -12861507 + (CTTTG)n Simple_repeat Simple_repeat 2 32 0 5 699 228 43 65 0 chr3R 15048515 15048561 -12856492 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 699 33 0 0 0 chr3R 15050195 15050228 -12854825 + AT_rich Low_complexity Low_complexity 1 33 0 5 699 39 50 0 0 chr3R 15052481 15052541 -12852512 + AT_rich Low_complexity Low_complexity 1 60 0 5 699 21 0 0 0 chr3R 15057647 15057668 -12847385 + AT_rich Low_complexity Low_complexity 1 21 0 5 699 22 0 0 0 chr3R 15058868 15058890 -12846163 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 23 54 0 0 chr3R 15061907 15061944 -12843109 + AT_rich Low_complexity Low_complexity 1 37 0 5 699 21 57 0 0 chr3R 15062380 15062415 -12842638 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 215 309 0 0 chr3R 15063015 15063096 -12841957 + (ATGGTG)n Simple_repeat Simple_repeat 6 86 0 5 699 22 0 0 0 chr3R 15065911 15065933 -12839120 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 22 35 0 0 chr3R 15066234 15066263 -12838790 + AT_rich Low_complexity Low_complexity 1 29 0 5 699 213 196 0 0 chr3R 15066311 15066367 -12838686 + T-rich Low_complexity Low_complexity 1 56 0 5 699 182 105 0 26 chr3R 15067302 15067341 -12837712 + (TTTTTA)n Simple_repeat Simple_repeat 2 39 0 5 699 25 31 0 0 chr3R 15071974 15072006 -12833047 + AT_rich Low_complexity Low_complexity 1 32 0 5 700 213 273 0 0 chr3R 15075322 15075377 -12829676 + (CAG)n Simple_repeat Simple_repeat 3 57 0 5 700 228 111 0 0 chr3R 15076555 15076591 -12828462 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 700 231 209 45 0 chr3R 15076724 15076741 -12828312 + ROO_I LTR Pao 679 745 -7508 5 700 249 128 0 0 chr3R 15076741 15076788 -12828265 + Gypsy11_I LTR Gypsy 520 566 -2958 5 700 189 94 0 0 chr3R 15077028 15077060 -12827993 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 700 29 70 0 0 chr3R 15077689 15077746 -12827307 + AT_rich Low_complexity Low_complexity 1 57 0 5 700 23 33 0 0 chr3R 15082434 15082464 -12822589 + AT_rich Low_complexity Low_complexity 1 30 0 5 700 189 0 0 0 chr3R 15082667 15082688 -12822365 + (ATG)n Simple_repeat Simple_repeat 2 22 0 5 700 239 238 0 16 chr3R 15083307 15083371 -12821682 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 700 21 36 0 0 chr3R 15087114 15087142 -12817911 + AT_rich Low_complexity Low_complexity 1 28 0 5 700 322 294 8 0 chr3R 15087187 15087306 -12817747 + (CGA)n Simple_repeat Simple_repeat 1 120 0 5 700 23 0 0 0 chr3R 15089681 15089704 -12815349 + AT_rich Low_complexity Low_complexity 1 23 0 5 700 22 0 0 0 chr3R 15090214 15090236 -12814817 + AT_rich Low_complexity Low_complexity 1 22 0 5 700 210 118 0 0 chr3R 15090350 15090384 -12814669 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 700 237 211 0 0 chr3R 15092060 15092112 -12812941 + CT-rich Low_complexity Low_complexity 2 53 0 5 700 24 0 0 0 chr3R 15092855 15092879 -12812174 + AT_rich Low_complexity Low_complexity 1 24 0 5 700 273 29 0 0 chr3R 15093257 15093291 -12811762 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 700 24 0 0 0 chr3R 15096765 15096789 -12808264 + AT_rich Low_complexity Low_complexity 1 24 0 5 700 207 0 0 0 chr3R 15099465 15099488 -12805565 + (GCTG)n Simple_repeat Simple_repeat 3 25 0 5 700 22 80 0 0 chr3R 15099935 15099985 -12805068 + AT_rich Low_complexity Low_complexity 1 50 0 5 700 21 0 0 0 chr3R 15103486 15103507 -12801546 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 23 33 0 0 chr3R 15105994 15106024 -12799029 + AT_rich Low_complexity Low_complexity 1 30 0 5 700 23 0 0 0 chr3R 15108684 15108707 -12796346 + AT_rich Low_complexity Low_complexity 1 23 0 5 700 192 40 0 0 chr3R 15114606 15114631 -12790422 + (CAT)n Simple_repeat Simple_repeat 1 25 0 5 700 22 70 0 0 chr3R 15116672 15116715 -12788338 + AT_rich Low_complexity Low_complexity 1 43 0 5 700 189 0 0 0 chr3R 15117570 15117591 -12787462 + (CGAGA)n Simple_repeat Simple_repeat 1 21 0 5 700 186 133 0 0 chr3R 15119562 15119592 -12785461 + (CCGAA)n Simple_repeat Simple_repeat 2 31 0 5 700 205 186 0 0 chr3R 15120529 15120572 -12784481 + T-rich Low_complexity Low_complexity 1 43 0 5 700 246 62 0 0 chr3R 15120977 15121009 -12784044 + (CAATG)n Simple_repeat Simple_repeat 5 36 0 5 700 34 42 0 0 chr3R 15121294 15121342 -12783711 + AT_rich Low_complexity Low_complexity 1 48 0 5 700 23 0 0 0 chr3R 15121410 15121433 -12783620 + AT_rich Low_complexity Low_complexity 1 23 0 5 700 28 29 0 0 chr3R 15122986 15123021 -12782032 + AT_rich Low_complexity Low_complexity 1 35 0 5 700 27 29 0 0 chr3R 15126357 15126391 -12778662 + AT_rich Low_complexity Low_complexity 1 34 0 5 700 225 159 0 0 chr3R 15126727 15126771 -12778282 + A-rich Low_complexity Low_complexity 1 44 0 5 700 337 271 0 0 chr3R 15128361 15128468 -12776585 + T-rich Low_complexity Low_complexity 1 107 0 5 700 26 30 0 0 chr3R 15128711 15128744 -12776309 + AT_rich Low_complexity Low_complexity 1 33 0 5 700 33 25 0 0 chr3R 15129381 15129421 -12775632 + AT_rich Low_complexity Low_complexity 1 40 0 5 700 243 0 0 0 chr3R 15129497 15129524 -12775529 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 5 700 201 147 0 0 chr3R 15130929 15130963 -12774090 + (CCG)n Simple_repeat Simple_repeat 3 36 0 5 700 223 258 16 0 chr3R 15133108 15133170 -12771883 + (CAGA)n Simple_repeat Simple_repeat 1 63 0 5 700 239 235 0 45 chr3R 15133935 15134024 -12771029 + A-rich Low_complexity Low_complexity 5 89 0 5 700 21 0 0 0 chr3R 15134501 15134522 -12770531 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 195 220 0 0 chr3R 15135173 15135223 -12769830 + (CTGGGG)n Simple_repeat Simple_repeat 2 51 0 5 700 225 132 0 0 chr3R 15135267 15135305 -12769748 + (CAG)n Simple_repeat Simple_repeat 2 39 0 5 700 224 310 0 22 chr3R 15136206 15136295 -12768758 + A-rich Low_complexity Low_complexity 2 88 0 5 700 201 74 0 0 chr3R 15136655 15136682 -12768371 + (CAT)n Simple_repeat Simple_repeat 3 29 0 5 700 189 171 0 0 chr3R 15137994 15138029 -12767024 + (CAAGG)n Simple_repeat Simple_repeat 4 38 0 5 700 189 159 0 0 chr3R 15139116 15139160 -12765893 + A-rich Low_complexity Low_complexity 1 44 0 5 700 200 132 0 26 chr3R 15139763 15139802 -12765251 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 5 700 279 0 0 0 chr3R 15141433 15141464 -12763589 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 700 279 133 0 0 chr3R 15149433 15149478 -12755575 + (CTCA)n Simple_repeat Simple_repeat 3 47 0 5 700 22 0 0 0 chr3R 15150112 15150134 -12754919 + AT_rich Low_complexity Low_complexity 1 22 0 5 700 198 0 0 0 chr3R 15151327 15151349 -12753704 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 700 26 30 0 0 chr3R 15152538 15152571 -12752482 + AT_rich Low_complexity Low_complexity 1 33 0 5 700 35 0 0 0 chr3R 15153218 15153253 -12751800 + AT_rich Low_complexity Low_complexity 1 35 0 5 700 37 73 0 27 chr3R 15153985 15154097 -12750956 + AT_rich Low_complexity Low_complexity 1 109 0 5 700 21 0 0 0 chr3R 15156536 15156557 -12748496 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 27 49 0 0 chr3R 15157274 15157315 -12747738 + AT_rich Low_complexity Low_complexity 1 41 0 5 700 250 156 15 15 chr3R 15159345 15159410 -12745643 + (CAA)n Simple_repeat Simple_repeat 1 65 0 5 700 286 194 45 72 chr3R 15159866 15159977 -12745076 + HELENA LINE Jockey 554 661 0 5 700 180 0 0 0 chr3R 15162545 15162565 -12742488 + (CTTTA)n Simple_repeat Simple_repeat 5 24 0 5 700 23 78 0 0 chr3R 15165048 15165099 -12739954 + AT_rich Low_complexity Low_complexity 1 51 0 5 700 25 31 0 0 chr3R 15166281 15166313 -12738740 + AT_rich Low_complexity Low_complexity 1 32 0 5 700 21 0 0 0 chr3R 15166827 15166848 -12738205 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 21 71 0 0 chr3R 15168651 15168693 -12736360 + AT_rich Low_complexity Low_complexity 1 42 0 5 700 28 29 0 0 chr3R 15169483 15169518 -12735535 + AT_rich Low_complexity Low_complexity 1 35 0 5 700 24 53 0 0 chr3R 15171465 15171503 -12733550 + AT_rich Low_complexity Low_complexity 1 38 0 5 700 291 250 42 0 chr3R 15173852 15173924 -12731129 + (ATGGTG)n Simple_repeat Simple_repeat 6 80 0 5 700 21 0 0 0 chr3R 15178549 15178570 -12726483 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 189 94 0 0 chr3R 15179765 15179797 -12725256 + (A)n Simple_repeat Simple_repeat 1 32 0 5 700 21 0 0 0 chr3R 15184520 15184541 -12720512 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 24 53 0 0 chr3R 15186181 15186219 -12718834 + AT_rich Low_complexity Low_complexity 1 38 0 5 700 218 116 23 0 chr3R 15187762 15187805 -12717248 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 700 22 35 0 0 chr3R 15188111 15188140 -12716913 + AT_rich Low_complexity Low_complexity 1 29 0 5 700 26 64 0 0 chr3R 15189591 15189638 -12715415 + AT_rich Low_complexity Low_complexity 1 47 0 5 700 25 83 0 0 chr3R 15193291 15193351 -12711702 + AT_rich Low_complexity Low_complexity 1 60 0 5 700 36 23 0 0 chr3R 15195158 15195201 -12709852 + AT_rich Low_complexity Low_complexity 1 43 0 5 700 224 299 0 0 chr3R 15196801 15196868 -12708185 + (CCG)n Simple_repeat Simple_repeat 3 69 0 5 700 25 0 0 0 chr3R 15198524 15198549 -12706504 + AT_rich Low_complexity Low_complexity 1 25 0 5 700 180 228 0 0 chr3R 15198914 15198971 -12706082 + A-rich Low_complexity Low_complexity 1 57 0 5 700 25 31 0 0 chr3R 15199521 15199553 -12705500 + AT_rich Low_complexity Low_complexity 1 32 0 5 700 21 0 0 0 chr3R 15200612 15200633 -12704420 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 23 0 0 0 chr3R 15202819 15202842 -12702211 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 204 111 0 0 chr3R 15204881 15204917 -12700136 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 5 701 242 167 0 16 chr3R 15208914 15208975 -12696078 + (CAAAC)n Simple_repeat Simple_repeat 5 64 0 5 701 23 0 0 0 chr3R 15211587 15211610 -12693443 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 23 68 0 0 chr3R 15212039 15212083 -12692970 + AT_rich Low_complexity Low_complexity 1 44 0 5 701 30 0 0 0 chr3R 15220898 15220928 -12684125 + AT_rich Low_complexity Low_complexity 1 30 0 5 701 30 0 0 0 chr3R 15225387 15225417 -12679636 + AT_rich Low_complexity Low_complexity 1 30 0 5 701 222 183 33 0 chr3R 15229236 15229296 -12675757 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 5 701 27 0 0 0 chr3R 15229994 15230021 -12675032 + AT_rich Low_complexity Low_complexity 1 27 0 5 701 219 36 0 0 chr3R 15236984 15237012 -12668041 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5 701 21 0 0 0 chr3R 15237899 15237920 -12667133 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 22 0 0 0 chr3R 15239462 15239484 -12665569 + AT_rich Low_complexity Low_complexity 1 22 0 5 701 230 183 42 14 chr3R 15241458 15241530 -12663523 + (CAAAC)n Simple_repeat Simple_repeat 2 75 0 5 701 207 211 19 0 chr3R 15241945 15241997 -12663056 + (CACCAT)n Simple_repeat Simple_repeat 2 54 0 5 701 35 0 0 0 chr3R 15244187 15244222 -12660831 + AT_rich Low_complexity Low_complexity 1 35 0 5 701 21 0 0 0 chr3R 15244315 15244336 -12660717 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 182 37 37 0 chr3R 15253216 15253243 -12651810 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 701 28 86 0 0 chr3R 15253309 15253379 -12651674 + AT_rich Low_complexity Low_complexity 1 70 0 5 701 23 0 0 0 chr3R 15255582 15255605 -12649448 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 25 0 0 0 chr3R 15255659 15255684 -12649369 + AT_rich Low_complexity Low_complexity 1 25 0 5 701 32 26 0 0 chr3R 15262417 15262456 -12642597 + AT_rich Low_complexity Low_complexity 1 39 0 5 701 23 0 0 0 chr3R 15263281 15263304 -12641749 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 39 74 0 0 chr3R 15265848 15265929 -12639124 + AT_rich Low_complexity Low_complexity 1 81 0 5 701 298 62 188 0 chr3R 15266066 15266114 -12638939 - DNAREP1_DM LINE Penelope -537 57 1 5 701 3711 7 0 0 chr3R 15267282 15267710 -12637343 + ROO_LTR LTR Pao 1 428 0 5 701 69921 1 3 2 chr3R 15267710 15275952 -12629101 + ROO_I LTR Pao 1 8256 0 5 701 3752 2 0 0 chr3R 15275952 15276380 -12628673 + ROO_LTR LTR Pao 1 428 0 5 701 216 149 0 0 chr3R 15278700 15278747 -12626306 + (ACTG)n Simple_repeat Simple_repeat 3 49 0 5 701 219 246 0 0 chr3R 15283622 15283683 -12621370 + A-rich Low_complexity Low_complexity 1 61 0 5 701 216 0 0 0 chr3R 15284843 15284867 -12620186 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 701 24 0 0 0 chr3R 15285095 15285119 -12619934 + AT_rich Low_complexity Low_complexity 1 24 0 5 701 24 0 0 0 chr3R 15285338 15285362 -12619691 + AT_rich Low_complexity Low_complexity 1 24 0 5 701 22 35 0 0 chr3R 15285574 15285603 -12619450 + AT_rich Low_complexity Low_complexity 1 29 0 5 701 21 0 0 0 chr3R 15285964 15285985 -12619068 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 26 0 0 0 chr3R 15287484 15287510 -12617543 + AT_rich Low_complexity Low_complexity 1 26 0 5 701 21 0 0 0 chr3R 15291788 15291809 -12613244 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 23 0 0 0 chr3R 15293714 15293737 -12611316 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 23 33 0 0 chr3R 15293776 15293806 -12611247 + AT_rich Low_complexity Low_complexity 1 30 0 5 701 279 140 0 0 chr3R 15294329 15294379 -12610674 + (TATG)n Simple_repeat Simple_repeat 2 51 0 5 701 207 0 0 0 chr3R 15294603 15294626 -12610427 + (TAAAG)n Simple_repeat Simple_repeat 4 26 0 5 701 264 59 0 0 chr3R 15295395 15295429 -12609624 + (ATG)n Simple_repeat Simple_repeat 1 34 0 5 701 23 0 0 0 chr3R 15296765 15296788 -12608265 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 22 0 0 0 chr3R 15297762 15297784 -12607269 + AT_rich Low_complexity Low_complexity 1 22 0 5 701 25 0 0 0 chr3R 15299008 15299033 -12606020 + AT_rich Low_complexity Low_complexity 1 25 0 5 701 50 42 0 0 chr3R 15299953 15300024 -12605029 + AT_rich Low_complexity Low_complexity 1 71 0 5 701 23 0 0 0 chr3R 15300044 15300067 -12604986 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 25 75 0 0 chr3R 15302307 15302360 -12602693 + AT_rich Low_complexity Low_complexity 1 53 0 5 701 27 29 0 0 chr3R 15308850 15308884 -12596169 + AT_rich Low_complexity Low_complexity 1 34 0 5 701 22 0 0 0 chr3R 15309404 15309426 -12595627 + AT_rich Low_complexity Low_complexity 1 22 0 5 701 28 29 0 0 chr3R 15314521 15314556 -12590497 + AT_rich Low_complexity Low_complexity 1 35 0 5 701 29 0 0 0 chr3R 15317439 15317468 -12587585 + AT_rich Low_complexity Low_complexity 1 29 0 5 701 216 143 53 18 chr3R 15317948 15318005 -12587048 + T-rich Low_complexity Low_complexity 2 60 0 5 701 26 74 0 0 chr3R 15319213 15319267 -12585786 + AT_rich Low_complexity Low_complexity 1 54 0 5 701 320 0 91 0 chr3R 15320157 15320212 -12584841 + (TTTTA)n Simple_repeat Simple_repeat 5 64 0 5 701 29 90 0 0 chr3R 15321815 15321893 -12583160 + AT_rich Low_complexity Low_complexity 1 78 0 5 701 228 241 0 0 chr3R 15323671 15323729 -12581324 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 701 186 118 0 0 chr3R 15324531 15324565 -12580488 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 701 220 191 0 0 chr3R 15325226 15325268 -12579785 + CT-rich Low_complexity Low_complexity 2 43 0 5 701 207 163 0 44 chr3R 15325653 15325698 -12579355 + (CTCG)n Simple_repeat Simple_repeat 2 44 0 5 701 216 184 0 0 chr3R 15326507 15326556 -12578497 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 701 225 180 0 0 chr3R 15329260 15329310 -12575743 + GA-rich Low_complexity Low_complexity 2 51 0 5 701 276 111 0 0 chr3R 15330961 15331006 -12574047 + (CTG)n Simple_repeat Simple_repeat 2 46 0 5 701 24 67 0 0 chr3R 15334403 15334448 -12570605 + AT_rich Low_complexity Low_complexity 1 45 0 5 701 23 0 0 0 chr3R 15335130 15335153 -12569900 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 214 179 0 0 chr3R 15335241 15335280 -12569773 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 87 240 229 0 16 chr3R 15335390 15335452 -12569601 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 702 23 0 0 0 chr3R 15337764 15337787 -12567266 + AT_rich Low_complexity Low_complexity 1 23 0 5 702 213 163 23 0 chr3R 15342322 15342365 -12562688 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 702 222 105 0 0 chr3R 15350264 15350302 -12554751 + (ATTG)n Simple_repeat Simple_repeat 1 38 0 5 702 325 191 56 0 chr3R 15350375 15350464 -12554589 + ROO_I LTR Pao 643 736 -7520 5 702 227 235 34 45 chr3R 15350392 15350481 -12554572 + TART_B1 LINE telomeric 120 207 -10447 5 702 253 177 38 0 chr3R 15352702 15352781 -12552272 + ROO_I LTR Pao 651 732 -7524 5 702 204 189 19 19 chr3R 15355131 15355185 -12549868 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 702 21 36 0 0 chr3R 15355483 15355511 -12549542 + AT_rich Low_complexity Low_complexity 1 28 0 5 702 200 231 0 55 chr3R 15355953 15356008 -12549045 + GA-rich Low_complexity Low_complexity 2 53 0 5 702 22 35 0 0 chr3R 15358070 15358099 -12546954 + AT_rich Low_complexity Low_complexity 1 29 0 5 702 229 311 0 0 chr3R 15358802 15358863 -12546190 + GA-rich Low_complexity Low_complexity 2 62 0 5 702 23 0 0 0 chr3R 15360036 15360059 -12544994 + AT_rich Low_complexity Low_complexity 1 23 0 5 702 22 0 0 0 chr3R 15363871 15363893 -12541160 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 33 25 0 0 chr3R 15364411 15364451 -12540602 + AT_rich Low_complexity Low_complexity 1 40 0 5 702 219 69 0 0 chr3R 15365274 15365303 -12539750 + (GCTG)n Simple_repeat Simple_repeat 1 29 0 5 702 28 48 0 0 chr3R 15370741 15370783 -12534270 + AT_rich Low_complexity Low_complexity 1 42 0 5 702 189 0 0 0 chr3R 15371126 15371147 -12533906 + (ACCTG)n Simple_repeat Simple_repeat 2 22 0 5 702 240 35 0 0 chr3R 15376339 15376368 -12528685 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 702 255 31 0 0 chr3R 15379632 15379664 -12525389 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 702 191 175 18 0 chr3R 15379780 15379837 -12525216 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 702 189 0 0 0 chr3R 15379978 15379999 -12525054 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 5 702 27 29 0 0 chr3R 15381923 15381957 -12523096 + AT_rich Low_complexity Low_complexity 1 34 0 5 702 25 51 0 0 chr3R 15381967 15382006 -12523047 + AT_rich Low_complexity Low_complexity 1 39 0 5 702 21 0 0 0 chr3R 15383789 15383810 -12521243 + AT_rich Low_complexity Low_complexity 1 21 0 5 702 21 71 0 0 chr3R 15383890 15383932 -12521121 + AT_rich Low_complexity Low_complexity 1 42 0 5 702 213 39 0 0 chr3R 15385784 15385810 -12519243 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 702 27 0 0 0 chr3R 15387277 15387304 -12517749 + AT_rich Low_complexity Low_complexity 1 27 0 5 702 205 178 0 0 chr3R 15387675 15387720 -12517333 + (CAG)n Simple_repeat Simple_repeat 2 46 0 5 702 25 75 0 0 chr3R 15392202 15392255 -12512798 + AT_rich Low_complexity Low_complexity 1 53 0 5 702 28 29 0 0 chr3R 15401351 15401386 -12503667 + AT_rich Low_complexity Low_complexity 1 35 0 5 702 22 35 0 0 chr3R 15402398 15402427 -12502626 + AT_rich Low_complexity Low_complexity 1 29 0 5 702 225 108 0 0 chr3R 15405489 15405526 -12499527 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 702 180 0 0 0 chr3R 15405657 15405677 -12499376 + (CTG)n Simple_repeat Simple_repeat 1 20 0 5 702 189 180 0 0 chr3R 15407710 15407760 -12497293 + T-rich Low_complexity Low_complexity 1 50 0 5 702 22 56 0 0 chr3R 15409242 15409278 -12495775 + AT_rich Low_complexity Low_complexity 1 36 0 5 702 36 53 0 0 chr3R 15410085 15410142 -12494911 + AT_rich Low_complexity Low_complexity 1 57 0 5 702 288 281 0 37 chr3R 15411135 15411242 -12493811 + ROO_I LTR Pao 642 744 -7512 5 702 214 324 0 9 chr3R 15411283 15411389 -12493664 + (CAG)n Simple_repeat Simple_repeat 2 106 0 5 702 220 254 0 0 chr3R 15411869 15411932 -12493121 + GA-rich Low_complexity Low_complexity 1 63 0 5 702 21 57 0 0 chr3R 15414136 15414171 -12490882 + AT_rich Low_complexity Low_complexity 1 35 0 5 702 23 54 0 0 chr3R 15417155 15417192 -12487861 + AT_rich Low_complexity Low_complexity 1 37 0 5 702 22 0 0 0 chr3R 15417254 15417276 -12487777 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 22 0 0 0 chr3R 15417305 15417327 -12487726 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 29 28 0 0 chr3R 15418988 15419024 -12486029 + AT_rich Low_complexity Low_complexity 1 36 0 5 702 186 143 0 0 chr3R 15419629 15419664 -12485389 + (CAG)n Simple_repeat Simple_repeat 3 37 0 5 702 25 31 0 0 chr3R 15421031 15421063 -12483990 + AT_rich Low_complexity Low_complexity 1 32 0 5 702 257 163 33 44 chr3R 15422973 15423063 -12481990 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 5 702 246 366 0 18 chr3R 15423515 15423679 -12481374 + G-rich Low_complexity Low_complexity 3 163 0 5 702 24 0 0 0 chr3R 15429260 15429284 -12475769 + AT_rich Low_complexity Low_complexity 1 24 0 5 702 254 167 130 0 chr3R 15432463 15432517 -12472536 + DNAREP1_DM LINE Penelope 2 62 -532 5 702 378 256 67 74 chr3R 15432556 15432691 -12472362 + DNAREP1_DM LINE Penelope 345 478 -116 5 702 198 0 0 0 chr3R 15432695 15432717 -12472336 + (TA)n Simple_repeat Simple_repeat 1 22 0 5 702 22 0 0 0 chr3R 15441478 15441500 -12463553 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 200 241 0 17 chr3R 15442138 15442197 -12462856 + (TA)n Simple_repeat Simple_repeat 1 58 0 5 702 22 0 0 0 chr3R 15445212 15445234 -12459819 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 204 40 0 0 chr3R 15449537 15449562 -12455491 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 702 204 40 0 0 chr3R 15451660 15451685 -12453368 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 702 21 36 0 0 chr3R 15454271 15454299 -12450754 + AT_rich Low_complexity Low_complexity 1 28 0 5 702 26 50 0 0 chr3R 15458922 15458962 -12446091 + AT_rich Low_complexity Low_complexity 1 40 0 5 702 24 77 0 0 chr3R 15460615 15460667 -12444386 + AT_rich Low_complexity Low_complexity 1 52 0 5 702 28 61 0 0 chr3R 15464483 15464532 -12440521 + AT_rich Low_complexity Low_complexity 1 49 0 5 703 21 0 0 0 chr3R 15467591 15467612 -12437441 + AT_rich Low_complexity Low_complexity 1 21 0 5 703 21 57 0 0 chr3R 15468342 15468377 -12436676 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 354 45 0 0 chr3R 15469709 15469753 -12435300 + (TTTAA)n Simple_repeat Simple_repeat 2 45 0 5 703 22 80 0 0 chr3R 15470332 15470382 -12434671 + AT_rich Low_complexity Low_complexity 1 50 0 5 703 34 79 0 0 chr3R 15470452 15470528 -12434525 + AT_rich Low_complexity Low_complexity 1 76 0 5 703 689 107 29 0 chr3R 15474566 15474669 -12430384 + PROTOP_B DNA P 1047 1152 -1 5 703 34 42 0 0 chr3R 15476893 15476941 -12428112 + AT_rich Low_complexity Low_complexity 1 48 0 5 703 258 152 0 0 chr3R 15482387 15482446 -12422607 + CT-rich Low_complexity Low_complexity 1 59 0 5 703 33 0 0 0 chr3R 15485872 15485905 -12419148 + AT_rich Low_complexity Low_complexity 1 33 0 5 703 24 0 0 0 chr3R 15486108 15486132 -12418921 + AT_rich Low_complexity Low_complexity 1 24 0 5 703 23 0 0 0 chr3R 15486239 15486262 -12418791 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 245 170 0 41 chr3R 15492229 15492278 -12412775 + DNAREP1_DM LINE Penelope 22 68 -526 5 703 249 152 22 0 chr3R 15492269 15492315 -12412738 + DNAREP1_DM LINE Penelope 286 332 -262 5 703 434 164 0 0 chr3R 15492344 15492417 -12412636 + DNAREP1_DM LINE Penelope 521 593 -1 5 703 22 35 0 0 chr3R 15493543 15493572 -12411481 + AT_rich Low_complexity Low_complexity 1 29 0 5 703 26 0 0 0 chr3R 15493652 15493678 -12411375 + AT_rich Low_complexity Low_complexity 1 26 0 5 703 204 111 0 0 chr3R 15494711 15494747 -12410306 + (GAA)n Simple_repeat Simple_repeat 2 37 0 5 703 35 24 0 0 chr3R 15496499 15496541 -12408512 + AT_rich Low_complexity Low_complexity 1 42 0 5 703 186 133 0 0 chr3R 15498985 15499015 -12406038 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 703 33 0 0 0 chr3R 15504832 15504865 -12400188 + AT_rich Low_complexity Low_complexity 1 33 0 5 703 330 138 0 0 chr3R 15505682 15505740 -12399313 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 703 277 221 0 29 chr3R 15506609 15506679 -12398374 + (TTG)n Simple_repeat Simple_repeat 1 68 0 5 703 217 219 0 0 chr3R 15507723 15507764 -12397289 + (TGG)n Simple_repeat Simple_repeat 1 41 0 5 703 180 111 0 0 chr3R 15508188 15508215 -12396838 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 5 703 387 0 0 0 chr3R 15508299 15508342 -12396711 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 703 276 77 0 0 chr3R 15510188 15510227 -12394826 + (GTTTG)n Simple_repeat Simple_repeat 3 41 0 5 703 189 0 0 0 chr3R 15512469 15512490 -12392563 + (GCCTG)n Simple_repeat Simple_repeat 3 23 0 5 703 189 0 0 0 chr3R 15514562 15514583 -12390470 + (CAT)n Simple_repeat Simple_repeat 1 21 0 5 703 282 125 0 0 chr3R 15514659 15514707 -12390346 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 703 26 0 0 0 chr3R 15515337 15515363 -12389690 + AT_rich Low_complexity Low_complexity 1 26 0 5 703 243 79 0 0 chr3R 15517596 15517634 -12387419 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 703 195 204 0 0 chr3R 15518989 15519043 -12386010 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 703 279 114 0 0 chr3R 15519186 15519230 -12385823 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 703 228 238 12 12 chr3R 15520946 15521027 -12384026 + (CAG)n Simple_repeat Simple_repeat 2 82 0 5 703 21 57 0 0 chr3R 15521701 15521736 -12383317 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 211 239 15 15 chr3R 15522648 15522716 -12382337 + GA-rich Low_complexity Low_complexity 2 69 0 5 703 180 0 0 0 chr3R 15524806 15524826 -12380227 + (T)n Simple_repeat Simple_repeat 1 20 0 5 703 211 213 0 0 chr3R 15526037 15526084 -12378969 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 703 36 23 0 0 chr3R 15526796 15526839 -12378214 + AT_rich Low_complexity Low_complexity 1 43 0 5 703 219 333 10 0 chr3R 15527848 15527947 -12377106 + (TTTG)n Simple_repeat Simple_repeat 1 100 0 5 703 245 287 0 54 chr3R 15529190 15529282 -12375771 + (TG)n Simple_repeat Simple_repeat 1 87 0 5 703 248 208 0 0 chr3R 15529619 15529667 -12375386 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 703 24 53 0 0 chr3R 15531218 15531256 -12373797 + AT_rich Low_complexity Low_complexity 1 38 0 5 703 3753 2 0 0 chr3R 15531295 15531694 -12373359 + BLOOD_LTR LTR Gypsy 1 399 0 5 703 60368 0 0 0 chr3R 15531694 15538307 -12366746 + BLOOD_I LTR Gypsy 1 6613 0 5 703 3753 2 0 0 chr3R 15538307 15538706 -12366347 + BLOOD_LTR LTR Gypsy 1 399 0 5 703 24 53 0 0 chr3R 15539684 15539722 -12365331 + AT_rich Low_complexity Low_complexity 1 38 0 5 703 205 243 0 0 chr3R 15540577 15540614 -12364439 + G-rich Low_complexity Low_complexity 3 39 0 5 703 276 30 0 0 chr3R 15542596 15542629 -12362424 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 703 192 40 0 0 chr3R 15543409 15543434 -12361619 + (TTTCG)n Simple_repeat Simple_repeat 5 29 0 5 703 27 0 0 65 chr3R 15543825 15543871 -12361182 + AT_rich Low_complexity Low_complexity 1 43 0 5 703 291 163 0 0 chr3R 15544491 15544540 -12360513 + DNAREP1_DM LINE Penelope 20 68 -526 5 703 207 0 0 0 chr3R 15545207 15545230 -12359823 + (CTG)n Simple_repeat Simple_repeat 2 24 0 5 703 44 70 0 0 chr3R 15546783 15546869 -12358184 + AT_rich Low_complexity Low_complexity 1 86 0 5 703 207 69 0 0 chr3R 15547351 15547380 -12357673 + (TTTCG)n Simple_repeat Simple_repeat 3 31 0 5 703 23 0 0 0 chr3R 15548000 15548023 -12357030 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 21 36 0 0 chr3R 15548137 15548165 -12356888 + AT_rich Low_complexity Low_complexity 1 28 0 5 703 34 0 0 0 chr3R 15551682 15551716 -12353337 + AT_rich Low_complexity Low_complexity 1 34 0 5 703 288 167 0 0 chr3R 15553317 15553389 -12351664 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 703 189 132 0 0 chr3R 15553509 15553547 -12351506 + (GAA)n Simple_repeat Simple_repeat 3 40 0 5 703 28 29 0 0 chr3R 15554184 15554219 -12350834 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 210 192 0 0 chr3R 15554832 15554884 -12350169 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 703 23 54 0 0 chr3R 15555956 15555993 -12349060 + AT_rich Low_complexity Low_complexity 1 37 0 5 703 198 103 0 0 chr3R 15556709 15556738 -12348315 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 703 286 280 10 0 chr3R 15556744 15556844 -12348209 + (TG)n Simple_repeat Simple_repeat 2 102 0 5 703 231 103 0 0 chr3R 15556866 15556905 -12348148 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5 703 209 205 0 0 chr3R 15557661 15557700 -12347353 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 703 223 67 21 43 chr3R 15561085 15561132 -12343921 + (CACCC)n Simple_repeat Simple_repeat 5 50 0 5 703 23 0 0 0 chr3R 15561453 15561476 -12343577 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 180 77 0 0 chr3R 15563752 15563778 -12341275 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 703 284 64 21 0 chr3R 15566684 15566731 -12338322 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 703 47936 3 0 0 chr3R 15570019 15575198 -12329855 + DMRT1A LINE R1 3 5181 -2 5 703 196 100 50 0 chr3R 15577058 15577098 -12327955 + (CATATA)n Simple_repeat Simple_repeat 6 47 0 5 703 207 191 0 0 chr3R 15581594 15581641 -12323412 + CT-rich Low_complexity Low_complexity 4 50 0 5 703 24 53 0 0 chr3R 15582611 15582649 -12322404 + AT_rich Low_complexity Low_complexity 1 38 0 5 703 21 57 0 0 chr3R 15582724 15582759 -12322294 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 303 104 0 0 chr3R 15584324 15584372 -12320681 + (TTCGG)n Simple_repeat Simple_repeat 3 50 0 5 703 21 0 0 0 chr3R 15585197 15585218 -12319835 + AT_rich Low_complexity Low_complexity 1 21 0 5 703 221 239 15 0 chr3R 15587033 15587100 -12317953 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 703 219 125 0 0 chr3R 15587252 15587292 -12317761 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 703 232 207 0 33 chr3R 15591098 15591158 -12313895 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 5 703 232 291 0 9 chr3R 15592048 15592159 -12312894 + (CCCA)n Simple_repeat Simple_repeat 1 110 0 5 703 212 0 0 35 chr3R 15592544 15592573 -12312480 + (CAACT)n Simple_repeat Simple_repeat 2 29 0 5 703 216 0 0 0 chr3R 15594893 15594917 -12310136 + (TC)n Simple_repeat Simple_repeat 2 25 0 5 703 21 0 0 0 chr3R 15595951 15595972 -12309081 + AT_rich Low_complexity Low_complexity 1 21 0 5 704 22 35 0 0 chr3R 15606387 15606416 -12298637 + AT_rich Low_complexity Low_complexity 1 29 0 5 704 22 0 0 0 chr3R 15608869 15608891 -12296162 + AT_rich Low_complexity Low_complexity 1 22 0 5 704 21 0 0 0 chr3R 15614584 15614605 -12290448 + AT_rich Low_complexity Low_complexity 1 21 0 5 704 24 0 0 0 chr3R 15617770 15617794 -12287259 + AT_rich Low_complexity Low_complexity 1 24 0 5 704 30 27 0 0 chr3R 15618883 15618920 -12286133 + AT_rich Low_complexity Low_complexity 1 37 0 5 704 28 48 0 0 chr3R 15619281 15619323 -12285730 + AT_rich Low_complexity Low_complexity 1 42 0 5 704 35 0 0 0 chr3R 15620475 15620510 -12284543 + AT_rich Low_complexity Low_complexity 1 35 0 5 704 21 104 0 0 chr3R 15621779 15621856 -12283197 + AT_rich Low_complexity Low_complexity 1 77 0 5 704 207 189 0 0 chr3R 15622294 15622347 -12282706 + (CTG)n Simple_repeat Simple_repeat 2 54 0 5 704 310 293 55 10 chr3R 15622680 15622790 -12282263 - ROO_I LTR Pao -7524 732 638 5 704 418 250 9 9 chr3R 15622827 15622936 -12282117 - ROO_I LTR Pao -7530 726 618 5 704 222 37 0 0 chr3R 15624094 15624121 -12280932 + (CAGGC)n Simple_repeat Simple_repeat 3 29 0 5 704 26 0 0 0 chr3R 15625327 15625353 -12279700 + AT_rich Low_complexity Low_complexity 1 26 0 5 704 23 0 0 0 chr3R 15626443 15626466 -12278587 + AT_rich Low_complexity Low_complexity 1 23 0 5 704 25 51 0 0 chr3R 15628217 15628256 -12276797 + AT_rich Low_complexity Low_complexity 1 39 0 5 704 240 59 0 0 chr3R 15629605 15629639 -12275414 + (T)n Simple_repeat Simple_repeat 1 34 0 5 704 25 0 0 0 chr3R 15633909 15633934 -12271119 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 204 97 0 0 chr3R 15634616 15634647 -12270406 + (CATAA)n Simple_repeat Simple_repeat 4 34 0 5 704 180 200 0 0 chr3R 15635197 15635237 -12269816 + (ATTCG)n Simple_repeat Simple_repeat 1 40 0 5 704 207 0 0 0 chr3R 15635489 15635512 -12269541 + (CATGC)n Simple_repeat Simple_repeat 3 25 0 5 704 204 97 0 0 chr3R 15640132 15640163 -12264890 + (CTTTG)n Simple_repeat Simple_repeat 5 35 0 5 704 198 0 0 0 chr3R 15640866 15640888 -12264165 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 704 225 154 0 0 chr3R 15642676 15642715 -12262338 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 704 243 88 0 0 chr3R 15647652 15647686 -12257367 + (CAATC)n Simple_repeat Simple_repeat 3 36 0 5 704 242 271 0 0 chr3R 15649951 15650010 -12255043 + (CCA)n Simple_repeat Simple_repeat 3 61 0 5 704 27 81 0 0 chr3R 15650999 15651061 -12253992 + AT_rich Low_complexity Low_complexity 1 62 0 5 704 200 289 19 0 chr3R 15651421 15651473 -12253580 + (TTCGGG)n Simple_repeat Simple_repeat 2 54 0 5 704 313 217 22 0 chr3R 15653614 15653706 -12251347 - ROO_I LTR Pao -7510 746 653 5 704 25 0 0 0 chr3R 15657548 15657573 -12247480 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 25 0 0 0 chr3R 15657725 15657750 -12247303 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 21 0 0 0 chr3R 15659414 15659435 -12245618 + AT_rich Low_complexity Low_complexity 1 21 0 5 704 31 0 0 0 chr3R 15662160 15662191 -12242862 + AT_rich Low_complexity Low_complexity 1 31 0 5 704 189 0 0 0 chr3R 15663356 15663377 -12241676 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 704 198 71 0 0 chr3R 15664825 15664853 -12240200 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 704 222 62 0 0 chr3R 15665605 15665637 -12239416 + (CGAAT)n Simple_repeat Simple_repeat 5 36 0 5 704 42 48 0 0 chr3R 15672505 15672568 -12232485 + AT_rich Low_complexity Low_complexity 1 63 0 5 704 25 0 0 0 chr3R 15678699 15678724 -12226329 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 21 71 0 0 chr3R 15679592 15679634 -12225419 + AT_rich Low_complexity Low_complexity 1 42 0 5 704 22 35 0 0 chr3R 15680086 15680115 -12224938 + AT_rich Low_complexity Low_complexity 1 29 0 5 704 22 35 0 0 chr3R 15696807 15696836 -12208217 + AT_rich Low_complexity Low_complexity 1 29 0 5 704 25 0 0 0 chr3R 15696866 15696891 -12208162 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 22 0 0 0 chr3R 15696948 15696970 -12208083 + AT_rich Low_complexity Low_complexity 1 22 0 5 704 23 54 0 0 chr3R 15700585 15700622 -12204431 + AT_rich Low_complexity Low_complexity 1 37 0 5 704 185 0 40 0 chr3R 15701552 15701577 -12203476 + (TTA)n Simple_repeat Simple_repeat 3 28 0 5 704 26 0 0 0 chr3R 15703371 15703397 -12201656 + AT_rich Low_complexity Low_complexity 1 26 0 5 704 379 153 0 20 chr3R 15712155 15712255 -12192798 + (TTG)n Simple_repeat Simple_repeat 1 98 0 5 704 201 266 31 0 chr3R 15714881 15714945 -12190108 + (CAT)n Simple_repeat Simple_repeat 3 68 0 5 704 29 60 0 0 chr3R 15715519 15715569 -12189484 + AT_rich Low_complexity Low_complexity 1 50 0 5 704 40 67 0 0 chr3R 15715997 15716072 -12188981 + AT_rich Low_complexity Low_complexity 1 75 0 5 704 267 114 0 0 chr3R 15716390 15716434 -12188619 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 704 58 0 0 0 chr3R 15717587 15717645 -12187408 + AT_rich Low_complexity Low_complexity 1 58 0 5 704 204 274 0 0 chr3R 15719193 15719244 -12185809 + (CAG)n Simple_repeat Simple_repeat 2 52 0 5 704 231 204 0 0 chr3R 15719571 15719625 -12185428 + (CAG)n Simple_repeat Simple_repeat 3 56 0 5 704 30 27 0 0 chr3R 15724148 15724185 -12180868 + AT_rich Low_complexity Low_complexity 1 37 0 5 704 25 75 0 0 chr3R 15724547 15724600 -12180453 + AT_rich Low_complexity Low_complexity 1 53 0 5 705 271 175 89 40 chr3R 15731184 15731285 -12173768 + ROO_I LTR Pao 627 732 -7524 5 705 23 33 0 0 chr3R 15732125 15732155 -12172898 + AT_rich Low_complexity Low_complexity 1 30 0 5 705 30 27 0 0 chr3R 15736071 15736108 -12168945 + AT_rich Low_complexity Low_complexity 1 37 0 5 705 34 0 0 0 chr3R 15739411 15739445 -12165608 + AT_rich Low_complexity Low_complexity 1 34 0 5 705 25 0 0 0 chr3R 15746302 15746327 -12158726 + AT_rich Low_complexity Low_complexity 1 25 0 5 705 22 0 0 0 chr3R 15749906 15749928 -12155125 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 22 0 0 0 chr3R 15750953 15750975 -12154078 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 21 0 0 0 chr3R 15751346 15751367 -12153686 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 35 0 0 0 chr3R 15756262 15756297 -12148756 + AT_rich Low_complexity Low_complexity 1 35 0 5 705 26 30 0 0 chr3R 15761162 15761195 -12143858 + AT_rich Low_complexity Low_complexity 1 33 0 5 705 201 152 0 0 chr3R 15765344 15765377 -12139676 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 705 39 38 0 0 chr3R 15767635 15767688 -12137365 + AT_rich Low_complexity Low_complexity 1 53 0 5 705 183 100 0 0 chr3R 15770162 15770192 -12134861 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 705 198 156 0 0 chr3R 15771021 15771066 -12133987 + A-rich Low_complexity Low_complexity 1 45 0 5 705 198 71 0 0 chr3R 15771397 15771425 -12133628 + (A)n Simple_repeat Simple_repeat 1 28 0 5 705 25 31 0 0 chr3R 15771886 15771918 -12133135 + AT_rich Low_complexity Low_complexity 1 32 0 5 705 225 0 0 0 chr3R 15772205 15772230 -12132823 + (A)n Simple_repeat Simple_repeat 1 25 0 5 705 244 265 0 0 chr3R 15774793 15774842 -12130211 + DNAREP1_DM LINE Penelope 23 71 -523 5 705 232 182 0 0 chr3R 15777715 15777759 -12127294 - DNAREP1_DM LINE Penelope 0 594 551 5 705 24 53 0 0 chr3R 15777993 15778031 -12127022 + AT_rich Low_complexity Low_complexity 1 38 0 5 705 207 146 0 0 chr3R 15778368 15778409 -12126644 + (TGG)n Simple_repeat Simple_repeat 1 41 0 5 705 210 143 0 0 chr3R 15784069 15784104 -12120949 + (CATA)n Simple_repeat Simple_repeat 4 38 0 5 705 31 58 0 0 chr3R 15784816 15784868 -12120185 + AT_rich Low_complexity Low_complexity 1 52 0 5 705 23 0 0 0 chr3R 15785105 15785128 -12119925 + AT_rich Low_complexity Low_complexity 1 23 0 5 705 180 111 0 0 chr3R 15788734 15788761 -12116292 + (T)n Simple_repeat Simple_repeat 1 27 0 5 705 36 40 0 0 chr3R 15789370 15789420 -12115633 + AT_rich Low_complexity Low_complexity 1 50 0 5 705 180 97 0 0 chr3R 15794789 15794820 -12110233 + (A)n Simple_repeat Simple_repeat 1 31 0 5 705 32 26 0 0 chr3R 15795575 15795614 -12109439 + AT_rich Low_complexity Low_complexity 1 39 0 5 705 355 194 10 10 chr3R 15796108 15796207 -12108846 + (ACTG)n Simple_repeat Simple_repeat 3 101 0 5 705 29 0 0 0 chr3R 15796781 15796810 -12108243 + AT_rich Low_complexity Low_complexity 1 29 0 5 705 28 0 0 0 chr3R 15796871 15796899 -12108154 + AT_rich Low_complexity Low_complexity 1 28 0 5 705 27 73 0 0 chr3R 15798081 15798136 -12106917 + AT_rich Low_complexity Low_complexity 1 55 0 5 705 24 67 0 0 chr3R 15798561 15798606 -12106447 + AT_rich Low_complexity Low_complexity 1 45 0 5 705 24 0 0 0 chr3R 15805259 15805283 -12099770 + AT_rich Low_complexity Low_complexity 1 24 0 5 705 21 0 0 0 chr3R 15811515 15811536 -12093517 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 188 100 25 0 chr3R 15812775 15812815 -12092238 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 705 22 0 0 0 chr3R 15816571 15816593 -12088460 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 21 0 0 0 chr3R 15816643 15816664 -12088389 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 279 93 0 0 chr3R 15817352 15817395 -12087658 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 705 22 0 0 0 chr3R 15818109 15818131 -12086922 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 217 132 0 0 chr3R 15820022 15820060 -12084993 + (GAGTG)n Simple_repeat Simple_repeat 3 40 0 5 705 40 21 0 0 chr3R 15821955 15822002 -12083051 + AT_rich Low_complexity Low_complexity 1 47 0 5 705 192 77 0 0 chr3R 15822312 15822338 -12082715 + (TATAG)n Simple_repeat Simple_repeat 3 28 0 5 705 231 36 0 0 chr3R 15823249 15823277 -12081776 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 5 705 195 184 0 0 chr3R 15825712 15825750 -12079303 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 5 705 283 51 0 0 chr3R 15827420 15827459 -12077594 + Rehavkus-1_DY DNA Tc1 1 38 -5577 5 705 704 65 0 0 chr3R 15827467 15827560 -12077493 + Rehavkus-1_DY DNA Tc1 5647 5738 0 5 705 27 0 0 0 chr3R 15831734 15831761 -12073292 + AT_rich Low_complexity Low_complexity 1 27 0 5 705 276 149 0 0 chr3R 15835594 15835641 -12069412 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 705 195 139 0 0 chr3R 15835729 15835765 -12069288 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 705 260 123 82 0 chr3R 15835995 15836068 -12068985 + ROO_I LTR Pao 652 730 -7526 5 705 302 165 0 96 chr3R 15836085 15836179 -12068874 + ROO_I LTR Pao 640 724 -7532 5 705 255 239 21 21 chr3R 15836241 15836335 -12068718 + (CAG)n Simple_repeat Simple_repeat 3 96 0 5 705 196 131 21 21 chr3R 15836779 15836826 -12068227 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 705 210 171 0 0 chr3R 15836858 15836899 -12068154 + (CAG)n Simple_repeat Simple_repeat 2 42 0 5 705 201 94 0 0 chr3R 15837159 15837191 -12067862 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 705 198 0 0 0 chr3R 15838273 15838295 -12066758 + (TCG)n Simple_repeat Simple_repeat 2 23 0 5 705 1485 137 149 10 chr3R 15838526 15838821 -12066232 + DMRP1 Unknown Unknown 1 336 -10 5 705 34 24 0 0 chr3R 15844132 15844173 -12060880 + AT_rich Low_complexity Low_complexity 1 41 0 5 705 25 83 0 0 chr3R 15848697 15848757 -12056296 + AT_rich Low_complexity Low_complexity 1 60 0 5 705 21 0 0 0 chr3R 15852331 15852352 -12052701 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 21 0 0 0 chr3R 15857444 15857465 -12047588 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 275 257 14 0 chr3R 15861540 15861614 -12043439 + (CTG)n Simple_repeat Simple_repeat 3 77 0 5 706 29 47 0 0 chr3R 15862041 15862084 -12042969 + AT_rich Low_complexity Low_complexity 1 43 0 5 706 23 0 0 0 chr3R 15864173 15864196 -12040857 + AT_rich Low_complexity Low_complexity 1 23 0 5 706 26 0 0 0 chr3R 15871404 15871430 -12033623 + AT_rich Low_complexity Low_complexity 1 26 0 5 706 29 47 0 0 chr3R 15875197 15875240 -12029813 + AT_rich Low_complexity Low_complexity 1 43 0 5 706 21 0 0 0 chr3R 15876961 15876982 -12028071 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 21 36 0 0 chr3R 15880383 15880411 -12024642 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 23 33 0 0 chr3R 15883308 15883338 -12021715 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 21 36 0 0 chr3R 15884769 15884797 -12020256 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 204 293 0 0 chr3R 15888109 15888167 -12016886 + GA-rich Low_complexity Low_complexity 4 61 0 5 706 210 132 0 50 chr3R 15888126 15888166 -12016887 + A-rich Low_complexity Low_complexity 1 38 0 5 706 23 0 0 0 chr3R 15890819 15890842 -12014211 + AT_rich Low_complexity Low_complexity 1 23 0 5 706 23 0 0 0 chr3R 15890973 15890996 -12014057 + AT_rich Low_complexity Low_complexity 1 23 0 5 706 246 61 20 39 chr3R 15892453 15892504 -12012549 + (TATG)n Simple_repeat Simple_repeat 2 51 0 5 706 198 192 0 0 chr3R 15894739 15894791 -12010262 + GA-rich Low_complexity Low_complexity 2 53 0 5 706 183 80 0 0 chr3R 15896242 15896267 -12008786 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 5 706 23 54 0 0 chr3R 15898366 15898403 -12006650 + AT_rich Low_complexity Low_complexity 1 37 0 5 706 279 265 0 0 chr3R 15899440 15899523 -12005530 + (ACTG)n Simple_repeat Simple_repeat 3 85 0 5 706 24 32 0 0 chr3R 15901522 15901553 -12003500 + AT_rich Low_complexity Low_complexity 1 31 0 5 706 205 162 0 0 chr3R 15901906 15901943 -12003110 + (CGGAA)n Simple_repeat Simple_repeat 1 37 0 5 706 24 67 0 0 chr3R 15908518 15908563 -11996490 + AT_rich Low_complexity Low_complexity 1 45 0 5 706 33 25 0 0 chr3R 15909624 15909664 -11995389 + AT_rich Low_complexity Low_complexity 1 40 0 5 706 28 0 0 0 chr3R 15911632 15911660 -11993393 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 22 0 0 0 chr3R 15913878 15913900 -11991153 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 31 26 0 0 chr3R 15915703 15915741 -11989312 + AT_rich Low_complexity Low_complexity 1 38 0 5 706 208 139 0 0 chr3R 15921064 15921100 -11983953 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 706 22 0 0 0 chr3R 15921413 15921435 -11983618 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 228 136 0 0 chr3R 15924084 15924128 -11980925 - HOBO DNA hAT 0 3016 2973 5 706 65 25 0 0 chr3R 15924231 15924310 -11980743 + AT_rich Low_complexity Low_complexity 1 79 0 5 706 317 205 24 0 chr3R 15924315 15924398 -11980655 - HOBO DNA hAT -2739 277 193 5 706 1024 128 26 11 chr3R 15924447 15924636 -11980417 - HOBO DNA hAT -2824 192 1 5 706 198 192 0 0 chr3R 15929598 15929650 -11975403 + (CAA)n Simple_repeat Simple_repeat 1 52 0 5 706 30 45 0 0 chr3R 15929925 15929969 -11975084 + AT_rich Low_complexity Low_complexity 1 44 0 5 706 210 118 0 0 chr3R 15930348 15930382 -11974671 + (CAG)n Simple_repeat Simple_repeat 3 36 0 5 706 209 191 0 0 chr3R 15932287 15932329 -11972724 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 706 183 100 0 0 chr3R 15932342 15932372 -11972681 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 706 307 49 0 0 chr3R 15934705 15934746 -11970307 + Transib-N1_DM DNA Transib 1 41 -473 5 706 1764 98 50 41 chr3R 15934779 15935119 -11969934 + Transib-N1_DM DNA Transib 129 471 -43 5 706 419 169 11 43 chr3R 15935111 15935204 -11969849 + DNAREP1_DM LINE Penelope 400 489 -105 5 706 2297 0 0 0 chr3R 15935314 15935590 -11969463 - Copia_LTR LTR Copia 0 276 1 5 706 39221 1 0 1 chr3R 15935590 15940186 -11964867 - Copia_I LTR Copia 0 4593 1 5 706 2297 0 0 0 chr3R 15940186 15940462 -11964591 - Copia_LTR LTR Copia 0 276 1 5 706 277 175 0 17 chr3R 15943515 15943573 -11961480 - DNAREP1_DM LINE Penelope -110 484 428 5 706 25 65 0 0 chr3R 15945420 15945466 -11959587 + AT_rich Low_complexity Low_complexity 1 46 0 5 706 22 106 0 0 chr3R 15945517 15945602 -11959451 + AT_rich Low_complexity Low_complexity 1 85 0 5 706 22 35 0 0 chr3R 15951594 15951623 -11953430 + AT_rich Low_complexity Low_complexity 1 29 0 5 706 404 130 0 0 chr3R 15951752 15951821 -11953232 + DNAREP1_DM LINE Penelope 515 583 -11 5 706 30 0 0 0 chr3R 15952869 15952899 -11952154 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 23 33 0 0 chr3R 15953427 15953457 -11951596 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 234 105 0 0 chr3R 15954268 15954306 -11950747 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 706 214 147 0 0 chr3R 15955368 15955402 -11949651 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 706 22 0 0 0 chr3R 15956446 15956468 -11948585 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 212 238 0 0 chr3R 15958301 15958343 -11946710 + (CTG)n Simple_repeat Simple_repeat 3 44 0 5 706 24 0 0 0 chr3R 15962209 15962233 -11942820 + AT_rich Low_complexity Low_complexity 1 24 0 5 706 201 234 0 72 chr3R 15964431 15964514 -11940539 + A-rich Low_complexity Low_complexity 4 80 0 5 706 341 58 19 0 chr3R 15966394 15966446 -11938607 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 706 22 0 0 0 chr3R 15971152 15971174 -11933879 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 21 0 0 0 chr3R 15971295 15971316 -11933737 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 21 0 0 0 chr3R 15972591 15972612 -11932441 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 22 0 0 0 chr3R 15975269 15975291 -11929762 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 180 111 0 0 chr3R 15977951 15977978 -11927075 + (TTCTCC)n Simple_repeat Simple_repeat 6 32 0 5 706 50 18 0 0 chr3R 15978377 15978434 -11926619 + AT_rich Low_complexity Low_complexity 1 57 0 5 706 3742 2 0 0 chr3R 15982467 15982895 -11922158 - ROO_LTR LTR Pao 0 428 1 5 88 70168 1 2 2 chr3R 15982895 15991151 -11913902 - ROO_I LTR Pao 0 8256 1 5 707 3742 2 0 0 chr3R 15991151 15991579 -11913474 - ROO_LTR LTR Pao 0 428 1 5 707 238 127 13 66 chr3R 15997724 15997800 -11907253 + (TAA)n Simple_repeat Simple_repeat 2 73 0 5 707 23 33 0 0 chr3R 15998268 15998298 -11906755 + AT_rich Low_complexity Low_complexity 1 30 0 5 707 36 40 0 0 chr3R 16000544 16000594 -11904459 + AT_rich Low_complexity Low_complexity 1 50 0 5 707 221 83 0 27 chr3R 16001559 16001596 -11903457 + (CAAAAA)n Simple_repeat Simple_repeat 5 40 0 5 707 201 39 0 0 chr3R 16001614 16001640 -11903413 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 707 23 0 0 0 chr3R 16002103 16002126 -11902927 + AT_rich Low_complexity Low_complexity 1 23 0 5 707 216 67 0 0 chr3R 16003196 16003226 -11901827 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 707 239 191 0 0 chr3R 16006653 16006700 -11898353 + DNAREP1_DM LINE Penelope 7 53 -541 5 707 254 229 0 0 chr3R 16006712 16006773 -11898280 + DNAREP1_DM LINE Penelope 270 330 -264 5 707 43 71 0 0 chr3R 16007140 16007225 -11897828 + AT_rich Low_complexity Low_complexity 1 85 0 5 707 239 296 87 34 chr3R 16007322 16007532 -11897521 + DNAREP1_DM LINE Penelope 16 373 -221 5 707 202 228 17 17 chr3R 16008963 16009021 -11896032 + (CAG)n Simple_repeat Simple_repeat 3 60 0 5 707 21 0 0 0 chr3R 16011808 16011829 -11893224 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 188 213 0 16 chr3R 16012459 16012521 -11892532 + (CACTC)n Simple_repeat Simple_repeat 3 63 0 5 707 33 25 0 0 chr3R 16012925 16012965 -11892088 + AT_rich Low_complexity Low_complexity 1 40 0 5 707 27 0 0 0 chr3R 16013073 16013100 -11891953 + AT_rich Low_complexity Low_complexity 1 27 0 5 707 44 0 0 0 chr3R 16013700 16013744 -11891309 + AT_rich Low_complexity Low_complexity 1 44 0 5 707 27 0 0 0 chr3R 16014745 16014772 -11890281 + AT_rich Low_complexity Low_complexity 1 27 0 5 707 273 167 0 0 chr3R 16015994 16016048 -11889005 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 707 28 0 0 0 chr3R 16017315 16017343 -11887710 + AT_rich Low_complexity Low_complexity 1 28 0 5 707 186 43 0 0 chr3R 16017935 16017958 -11887095 + (TTTCG)n Simple_repeat Simple_repeat 5 27 0 5 707 27 0 0 0 chr3R 16018272 16018299 -11886754 + AT_rich Low_complexity Low_complexity 1 27 0 5 707 22 35 0 0 chr3R 16020440 16020469 -11884584 + AT_rich Low_complexity Low_complexity 1 29 0 5 707 206 250 0 0 chr3R 16022167 16022219 -11882834 + (CAGA)n Simple_repeat Simple_repeat 3 54 0 5 707 183 42 0 0 chr3R 16022463 16022487 -11882566 + (CAGTG)n Simple_repeat Simple_repeat 3 26 0 5 707 30 69 0 0 chr3R 16023033 16023091 -11881962 + AT_rich Low_complexity Low_complexity 1 58 0 5 707 212 135 0 51 chr3R 16024885 16024924 -11880129 + (TATG)n Simple_repeat Simple_repeat 3 39 0 5 707 342 0 0 0 chr3R 16030354 16030392 -11874661 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 707 23 54 0 0 chr3R 16031975 16032012 -11873041 + AT_rich Low_complexity Low_complexity 1 37 0 5 707 21 0 0 0 chr3R 16033607 16033628 -11871425 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 183 100 0 0 chr3R 16036990 16037020 -11868033 + (CTG)n Simple_repeat Simple_repeat 2 31 0 5 707 200 255 0 0 chr3R 16039359 16039410 -11865643 + G-rich Low_complexity Low_complexity 1 51 0 5 707 210 71 0 0 chr3R 16040521 16040549 -11864504 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 5 707 207 69 0 0 chr3R 16040640 16040669 -11864384 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 707 21 0 0 0 chr3R 16043348 16043369 -11861684 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 189 121 0 0 chr3R 16045445 16045478 -11859575 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 707 21 0 0 0 chr3R 16051578 16051599 -11853454 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 183 100 0 0 chr3R 16052502 16052532 -11852521 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 707 204 120 60 0 chr3R 16052696 16052746 -11852307 + (TAA)n Simple_repeat Simple_repeat 3 55 0 5 707 43 56 0 0 chr3R 16052820 16052891 -11852162 + AT_rich Low_complexity Low_complexity 1 71 0 5 707 282 95 0 0 chr3R 16053361 16053403 -11851650 + (CAG)n Simple_repeat Simple_repeat 2 43 0 5 707 33 25 0 0 chr3R 16056178 16056218 -11848835 + AT_rich Low_complexity Low_complexity 1 40 0 5 707 195 162 0 0 chr3R 16056710 16056747 -11848306 + (ATG)n Simple_repeat Simple_repeat 2 38 0 5 707 225 94 0 0 chr3R 16058775 16058807 -11846246 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 707 189 0 0 0 chr3R 16060089 16060110 -11844943 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 707 264 120 0 0 chr3R 16063971 16064021 -11841032 + (CAG)n Simple_repeat Simple_repeat 1 50 0 5 707 325 258 0 0 chr3R 16064511 16064608 -11840445 + CT-rich Low_complexity Low_complexity 3 99 0 5 707 270 125 0 0 chr3R 16066066 16066114 -11838939 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 707 22 35 0 0 chr3R 16068402 16068431 -11836622 + AT_rich Low_complexity Low_complexity 1 29 0 5 707 24 0 0 0 chr3R 16068557 16068581 -11836472 + AT_rich Low_complexity Low_complexity 1 24 0 5 707 210 162 0 0 chr3R 16070442 16070479 -11834574 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 707 30609 1 0 0 chr3R 16071058 16074603 -11830450 - FW_DM LINE Jockey 0 4692 1148 5 707 36 0 0 0 chr3R 16074685 16074721 -11830332 + AT_rich Low_complexity Low_complexity 1 36 0 5 707 258 125 0 0 chr3R 16075595 16075643 -11829410 + (A)n Simple_repeat Simple_repeat 1 48 0 5 707 21 0 0 0 chr3R 16078309 16078330 -11826723 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 223 267 40 0 chr3R 16079632 16079707 -11825346 + CT-rich Low_complexity Low_complexity 1 78 0 5 707 21 0 0 0 chr3R 16080260 16080281 -11824772 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 211 200 0 0 chr3R 16082888 16082923 -11822130 + (CATA)n Simple_repeat Simple_repeat 4 38 0 5 707 195 139 0 0 chr3R 16083478 16083514 -11821539 + (TTG)n Simple_repeat Simple_repeat 1 36 0 5 707 501 120 0 0 chr3R 16087562 16087654 -11817399 + (CAGT)n Simple_repeat Simple_repeat 1 92 0 5 707 180 176 0 0 chr3R 16087789 16087823 -11817230 + (CATA)n Simple_repeat Simple_repeat 3 36 0 5 707 22 56 0 0 chr3R 16088114 16088150 -11816903 + AT_rich Low_complexity Low_complexity 1 36 0 5 707 23 68 0 0 chr3R 16089206 16089250 -11815803 + AT_rich Low_complexity Low_complexity 1 44 0 5 707 217 219 0 0 chr3R 16091906 16091947 -11813106 + (CATA)n Simple_repeat Simple_repeat 2 42 0 5 707 2333 4 0 4 chr3R 16092292 16092568 -11812485 + BURDOCK_LTR LTR Gypsy 1 275 0 5 707 50814 2 0 0 chr3R 16092568 16098429 -11806624 + BURDOCK_I LTR Gypsy 1 5860 0 5 707 2333 4 0 4 chr3R 16098430 16098706 -11806347 + BURDOCK_LTR LTR Gypsy 1 275 0 5 707 209 280 0 0 chr3R 16100600 16100650 -11804403 + (TATG)n Simple_repeat Simple_repeat 2 51 0 5 707 21 0 0 0 chr3R 16106258 16106279 -11798774 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 25 51 0 0 chr3R 16106368 16106407 -11798646 + AT_rich Low_complexity Low_complexity 1 39 0 5 707 207 232 0 0 chr3R 16108699 16108755 -11796298 + (CAA)n Simple_repeat Simple_repeat 1 56 0 5 707 209 255 0 0 chr3R 16109496 16109543 -11795510 + (CTG)n Simple_repeat Simple_repeat 3 49 0 5 707 28 0 0 0 chr3R 16110404 16110432 -11794621 + AT_rich Low_complexity Low_complexity 1 28 0 5 707 189 0 0 0 chr3R 16111669 16111690 -11793363 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 707 234 141 12 37 chr3R 16113987 16114068 -11790985 + ROO_I LTR Pao 651 729 -7527 5 707 180 0 0 0 chr3R 16114216 16114236 -11790817 + (CAG)n Simple_repeat Simple_repeat 1 20 0 5 707 347 182 0 13 chr3R 16114346 16114424 -11790629 + ROO_I LTR Pao 652 728 -7528 5 707 234 150 0 0 chr3R 16114558 16114598 -11790455 + (CAA)n Simple_repeat Simple_repeat 1 40 0 5 707 212 227 0 0 chr3R 16114621 16114665 -11790388 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 707 23 78 0 0 chr3R 16116561 16116612 -11788441 + AT_rich Low_complexity Low_complexity 1 51 0 5 707 232 202 0 175 chr3R 16119561 16119675 -11785378 + ROO_I LTR Pao 641 734 -7522 5 707 207 276 0 41 chr3R 16119738 16119859 -11785194 + (CAG)n Simple_repeat Simple_repeat 3 118 0 5 707 206 136 0 22 chr3R 16119892 16119937 -11785116 + (CAG)n Simple_repeat Simple_repeat 2 45 0 5 707 321 188 24 36 chr3R 16120370 16120453 -11784600 + ROO_I LTR Pao 651 732 -7524 5 707 219 220 0 33 chr3R 16120562 16120623 -11784430 + (CAG)n Simple_repeat Simple_repeat 3 61 0 5 707 210 71 0 0 chr3R 16120822 16120850 -11784203 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 708 244 257 0 0 chr3R 16122902 16122976 -11782077 + GA-rich Low_complexity Low_complexity 3 76 0 5 708 214 151 18 36 chr3R 16123433 16123488 -11781565 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 708 31 0 0 0 chr3R 16127284 16127315 -11777738 + AT_rich Low_complexity Low_complexity 1 31 0 5 708 21 0 0 0 chr3R 16127988 16128009 -11777044 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 198 71 0 0 chr3R 16128125 16128153 -11776900 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 708 23 68 0 0 chr3R 16131645 16131689 -11773364 + AT_rich Low_complexity Low_complexity 1 44 0 5 708 236 118 0 0 chr3R 16131713 16131747 -11773306 - LINEJ1_DM LINE Jockey -517 4503 4470 5 708 33 0 0 0 chr3R 16134390 16134423 -11770630 + AT_rich Low_complexity Low_complexity 1 33 0 5 708 218 273 0 0 chr3R 16135741 16135807 -11769246 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 708 23 0 0 0 chr3R 16141743 16141766 -11763287 + AT_rich Low_complexity Low_complexity 1 23 0 5 708 214 261 0 0 chr3R 16143759 16143824 -11761229 + A-rich Low_complexity Low_complexity 1 65 0 5 708 21 57 0 0 chr3R 16144329 16144364 -11760689 + AT_rich Low_complexity Low_complexity 1 35 0 5 708 291 122 0 0 chr3R 16149239 16149288 -11755765 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 708 24 32 0 0 chr3R 16150059 16150090 -11754963 + AT_rich Low_complexity Low_complexity 1 31 0 5 708 195 100 0 0 chr3R 16151281 16151311 -11753742 + (GCTG)n Simple_repeat Simple_repeat 1 30 0 5 708 241 246 0 0 chr3R 16153127 16153184 -11751869 + (CCA)n Simple_repeat Simple_repeat 1 57 0 5 708 246 125 0 0 chr3R 16156112 16156160 -11748893 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 708 3990 2 0 0 chr3R 16156775 16157203 -11747850 + ROO_LTR LTR Pao 1 428 0 5 708 31 26 0 0 chr3R 16158445 16158483 -11746570 + AT_rich Low_complexity Low_complexity 1 38 0 5 708 203 171 0 0 chr3R 16158717 16158758 -11746295 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 708 21 57 0 0 chr3R 16159937 16159972 -11745081 + AT_rich Low_complexity Low_complexity 1 35 0 5 708 189 0 0 0 chr3R 16162456 16162477 -11742576 + (TTA)n Simple_repeat Simple_repeat 2 22 0 5 708 44 20 0 0 chr3R 16166412 16166463 -11738590 + AT_rich Low_complexity Low_complexity 1 51 0 5 708 279 175 143 0 chr3R 16168876 16168939 -11736114 - DNAREP1_DM LINE Penelope -1 593 522 5 708 391 143 0 41 chr3R 16169080 16169153 -11735900 - DNAREP1_DM LINE Penelope -524 70 1 5 708 30 27 0 0 chr3R 16171183 16171220 -11733833 + AT_rich Low_complexity Low_complexity 1 37 0 5 708 266 275 8 48 chr3R 16171377 16171503 -11733550 + (CTG)n Simple_repeat Simple_repeat 2 122 0 5 708 260 203 0 42 chr3R 16173367 16173439 -11731614 + (CAA)n Simple_repeat Simple_repeat 1 69 0 5 708 289 221 0 25 chr3R 16173464 16173543 -11731510 + (TG)n Simple_repeat Simple_repeat 1 77 0 5 708 30 27 0 0 chr3R 16174585 16174622 -11730431 + AT_rich Low_complexity Low_complexity 1 37 0 5 708 22 70 0 0 chr3R 16175355 16175398 -11729655 + AT_rich Low_complexity Low_complexity 1 43 0 5 708 27 81 0 0 chr3R 16175454 16175516 -11729537 + AT_rich Low_complexity Low_complexity 1 62 0 5 708 25 31 0 0 chr3R 16178311 16178343 -11726710 + AT_rich Low_complexity Low_complexity 1 32 0 5 708 195 100 0 0 chr3R 16178850 16178880 -11726173 + (TTG)n Simple_repeat Simple_repeat 1 30 0 5 708 21 71 0 0 chr3R 16179987 16180029 -11725024 + AT_rich Low_complexity Low_complexity 1 42 0 5 708 395 154 0 0 chr3R 16180687 16180752 -11724301 + DNAREP1_DM LINE Penelope 524 588 -6 5 708 23 54 0 0 chr3R 16181773 16181810 -11723243 + AT_rich Low_complexity Low_complexity 1 37 0 5 708 236 174 43 0 chr3R 16182940 16183009 -11722044 + (GGATG)n Simple_repeat Simple_repeat 4 75 0 5 708 270 0 0 0 chr3R 16184523 16184553 -11720500 + (A)n Simple_repeat Simple_repeat 1 30 0 5 708 202 53 24 73 chr3R 16185638 16185679 -11719374 + (TTAAA)n Simple_repeat Simple_repeat 4 42 0 5 708 34 65 0 0 chr3R 16185707 16185769 -11719284 + AT_rich Low_complexity Low_complexity 1 62 0 5 708 209 108 27 0 chr3R 16187693 16187730 -11717323 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 5 708 22 35 0 0 chr3R 16188396 16188425 -11716628 + AT_rich Low_complexity Low_complexity 1 29 0 5 708 231 157 0 0 chr3R 16188630 16188681 -11716372 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 708 215 222 0 0 chr3R 16189372 16189417 -11715636 + (CAT)n Simple_repeat Simple_repeat 1 45 0 5 708 21 0 0 0 chr3R 16189716 16189737 -11715316 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 23 0 0 0 chr3R 16191747 16191770 -11713283 + AT_rich Low_complexity Low_complexity 1 23 0 5 708 189 74 0 0 chr3R 16194898 16194925 -11710128 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 5 708 41 36 0 0 chr3R 16195140 16195195 -11709858 + AT_rich Low_complexity Low_complexity 1 55 0 5 708 209 186 0 0 chr3R 16196078 16196121 -11708932 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 708 234 270 0 0 chr3R 16196752 16196815 -11708238 - DNAREP1_DM LINE Penelope 0 594 532 5 708 215 250 28 0 chr3R 16198406 16198478 -11706575 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 708 241 309 0 0 chr3R 16201372 16201440 -11703613 + (CTGGGG)n Simple_repeat Simple_repeat 6 73 0 5 708 276 175 0 0 chr3R 16203487 16203550 -11701503 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 708 36 23 0 0 chr3R 16204085 16204128 -11700925 + AT_rich Low_complexity Low_complexity 1 43 0 5 708 192 167 0 0 chr3R 16205142 16205190 -11699863 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 708 188 167 21 0 chr3R 16205370 16205418 -11699635 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 708 21 36 0 0 chr3R 16209594 16209622 -11695431 + AT_rich Low_complexity Low_complexity 1 28 0 5 708 203 315 21 11 chr3R 16210312 16210405 -11694648 + (CGGA)n Simple_repeat Simple_repeat 4 97 0 5 708 219 231 0 0 chr3R 16210334 16210386 -11694667 + (ACTG)n Simple_repeat Simple_repeat 3 54 0 5 708 21 0 0 0 chr3R 16210767 16210788 -11694265 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 393 22 0 0 chr3R 16211924 16211970 -11693083 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 708 26 74 0 0 chr3R 16212266 16212320 -11692733 + AT_rich Low_complexity Low_complexity 1 54 0 5 708 180 217 0 0 chr3R 16212555 16212601 -11692452 + (CGGA)n Simple_repeat Simple_repeat 4 49 0 5 708 255 157 0 0 chr3R 16212894 16212945 -11692108 + (TCG)n Simple_repeat Simple_repeat 3 53 0 5 708 29 0 0 0 chr3R 16216884 16216913 -11688140 + AT_rich Low_complexity Low_complexity 1 29 0 5 708 188 67 33 0 chr3R 16218978 16219008 -11686045 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 708 21 36 0 0 chr3R 16219269 16219297 -11685756 + AT_rich Low_complexity Low_complexity 1 28 0 5 708 216 122 0 0 chr3R 16219761 16219802 -11685251 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 708 235 220 0 0 chr3R 16220366 16220416 -11684637 + (TCTG)n Simple_repeat Simple_repeat 4 53 0 5 708 21 0 0 0 chr3R 16220673 16220694 -11684359 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 211 224 0 17 chr3R 16223424 16223483 -11681570 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 708 312 127 0 0 chr3R 16226264 16226319 -11678734 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 708 212 100 0 48 chr3R 16226813 16226855 -11678198 + (TTG)n Simple_repeat Simple_repeat 2 41 0 5 708 29 90 0 0 chr3R 16228505 16228583 -11676470 + AT_rich Low_complexity Low_complexity 1 78 0 5 708 23 0 0 0 chr3R 16228662 16228685 -11676368 + AT_rich Low_complexity Low_complexity 1 23 0 5 708 38 0 0 0 chr3R 16229326 16229364 -11675689 + AT_rich Low_complexity Low_complexity 1 38 0 5 708 256 250 0 0 chr3R 16229392 16229444 -11675609 - DNAREP1_DM LINE Penelope -538 56 5 5 708 21 0 0 0 chr3R 16233774 16233795 -11671258 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 30 77 0 0 chr3R 16233861 16233926 -11671127 + AT_rich Low_complexity Low_complexity 1 65 0 5 708 29 28 0 0 chr3R 16235019 16235055 -11669998 + AT_rich Low_complexity Low_complexity 1 36 0 5 708 22 88 0 0 chr3R 16236147 16236204 -11668849 + AT_rich Low_complexity Low_complexity 1 57 0 5 708 29 90 0 0 chr3R 16239299 16239377 -11665676 + AT_rich Low_complexity Low_complexity 1 78 0 5 708 290 287 0 19 chr3R 16241012 16241115 -11663938 + (TTG)n Simple_repeat Simple_repeat 2 102 0 5 708 21 57 0 0 chr3R 16241652 16241687 -11663366 + AT_rich Low_complexity Low_complexity 1 35 0 5 708 26 50 0 0 chr3R 16242923 16242963 -11662090 + AT_rich Low_complexity Low_complexity 1 40 0 5 708 21 0 0 0 chr3R 16243971 16243992 -11661061 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 25 0 0 0 chr3R 16244556 16244581 -11660472 + AT_rich Low_complexity Low_complexity 1 25 0 5 708 25 31 0 0 chr3R 16246593 16246625 -11658428 + AT_rich Low_complexity Low_complexity 1 32 0 5 708 23 86 0 0 chr3R 16246696 16246754 -11658299 + AT_rich Low_complexity Low_complexity 1 58 0 5 708 23 78 0 0 chr3R 16248037 16248088 -11656965 + AT_rich Low_complexity Low_complexity 1 51 0 5 708 207 0 0 0 chr3R 16251519 16251542 -11653511 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 708 180 0 0 0 chr3R 16252517 16252537 -11652516 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 709 33 80 0 0 chr3R 16254223 16254298 -11650755 + AT_rich Low_complexity Low_complexity 1 75 0 5 709 23 0 0 0 chr3R 16254412 16254435 -11650618 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 23 33 0 0 chr3R 16257047 16257077 -11647976 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 22 70 0 0 chr3R 16257105 16257148 -11647905 + AT_rich Low_complexity Low_complexity 1 43 0 5 709 21 82 0 0 chr3R 16258933 16258982 -11646071 + AT_rich Low_complexity Low_complexity 1 49 0 5 709 219 189 0 0 chr3R 16259441 16259494 -11645559 + (CACCAT)n Simple_repeat Simple_repeat 3 55 0 5 709 22 35 0 0 chr3R 16260629 16260658 -11644395 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 255 191 0 0 chr3R 16261046 16261109 -11643944 + (CAGA)n Simple_repeat Simple_repeat 3 65 0 5 709 200 206 0 0 chr3R 16264381 16264415 -11640638 + (TTG)n Simple_repeat Simple_repeat 2 35 0 5 709 234 0 0 0 chr3R 16267317 16267343 -11637710 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 5 709 252 0 0 0 chr3R 16270689 16270717 -11634336 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 709 212 303 20 10 chr3R 16270811 16270911 -11634142 + GA-rich Low_complexity Low_complexity 5 105 0 5 709 22 80 0 0 chr3R 16273273 16273323 -11631730 + AT_rich Low_complexity Low_complexity 1 50 0 5 709 29 0 0 0 chr3R 16276407 16276436 -11628617 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 23 33 0 0 chr3R 16276479 16276509 -11628544 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 180 0 0 0 chr3R 16278831 16278851 -11626202 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 709 225 0 0 0 chr3R 16279445 16279470 -11625583 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 709 32 0 0 0 chr3R 16280421 16280453 -11624600 + AT_rich Low_complexity Low_complexity 1 32 0 5 709 22 35 0 0 chr3R 16281290 16281319 -11623734 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 233 135 19 0 chr3R 16281725 16281777 -11623276 + (CAGC)n Simple_repeat Simple_repeat 2 54 0 5 709 21 0 0 0 chr3R 16282240 16282261 -11622792 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 286 217 36 12 chr3R 16282646 16282730 -11622323 + (TG)n Simple_repeat Simple_repeat 1 86 0 5 709 21 0 0 0 chr3R 16283691 16283712 -11621341 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 234 62 0 0 chr3R 16285566 16285598 -11619455 + (CAA)n Simple_repeat Simple_repeat 1 32 0 5 709 29 28 0 0 chr3R 16287485 16287521 -11617532 + AT_rich Low_complexity Low_complexity 1 36 0 5 709 189 154 0 0 chr3R 16288154 16288193 -11616860 + A-rich Low_complexity Low_complexity 1 39 0 5 709 21 0 0 0 chr3R 16292504 16292525 -11612528 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 29 28 0 0 chr3R 16292588 16292624 -11612429 + AT_rich Low_complexity Low_complexity 1 36 0 5 709 23 0 0 0 chr3R 16293320 16293343 -11611710 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 42 20 0 0 chr3R 16295214 16295263 -11609790 + AT_rich Low_complexity Low_complexity 1 49 0 5 709 23 33 0 0 chr3R 16295341 16295371 -11609682 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 234 105 0 0 chr3R 16298051 16298089 -11606964 + (A)n Simple_repeat Simple_repeat 1 38 0 5 709 267 164 0 0 chr3R 16301633 16301694 -11603359 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 709 240 122 0 0 chr3R 16301898 16301939 -11603114 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 709 186 43 0 0 chr3R 16303001 16303024 -11602029 + (CTAA)n Simple_repeat Simple_repeat 2 24 0 5 709 27 100 0 0 chr3R 16303024 16303114 -11601939 + AT_rich Low_complexity Low_complexity 1 90 0 5 709 450 182 0 0 chr3R 16303414 16303524 -11601529 + (CAGT)n Simple_repeat Simple_repeat 2 111 0 5 709 231 103 0 0 chr3R 16304408 16304447 -11600606 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 709 23 0 0 0 chr3R 16305925 16305948 -11599105 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 183 162 0 0 chr3R 16310072 16310109 -11594944 + CT-rich Low_complexity Low_complexity 1 37 0 5 709 24 32 0 0 chr3R 16312496 16312527 -11592526 + AT_rich Low_complexity Low_complexity 1 31 0 5 709 225 65 0 0 chr3R 16315066 16315097 -11589956 + (CGTTG)n Simple_repeat Simple_repeat 5 35 0 5 709 22 0 0 0 chr3R 16316580 16316602 -11588451 + AT_rich Low_complexity Low_complexity 1 22 0 5 709 30 0 0 0 chr3R 16317156 16317186 -11587867 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 24 0 0 0 chr3R 16320819 16320843 -11584210 + AT_rich Low_complexity Low_complexity 1 24 0 5 709 245 133 43 43 chr3R 16321405 16321452 -11583601 - DNAREP1_DM LINE Penelope -238 356 310 5 709 22 35 0 0 chr3R 16322654 16322683 -11582370 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 22 0 0 0 chr3R 16324823 16324845 -11580208 + AT_rich Low_complexity Low_complexity 1 22 0 5 709 239 184 0 0 chr3R 16326400 16326438 -11578615 + DNAREP1_DM LINE Penelope 1 38 -556 5 709 25 31 0 0 chr3R 16326465 16326497 -11578556 + AT_rich Low_complexity Low_complexity 1 32 0 5 709 33 43 0 0 chr3R 16327825 16327872 -11577181 + AT_rich Low_complexity Low_complexity 1 47 0 5 709 26 30 0 0 chr3R 16332138 16332171 -11572882 + AT_rich Low_complexity Low_complexity 1 33 0 5 709 6784 9 5 0 chr3R 16332362 16333108 -11571945 + BS LINE Jockey 4375 5124 -2 5 709 21 0 0 0 chr3R 16337429 16337450 -11567603 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 4792 4 0 0 chr3R 16338780 16339298 -11565755 + NOMAD_LTR LTR Gypsy 1 518 0 5 709 7072 0 4 0 chr3R 16339298 16340063 -11564990 + NOMAD_I LTR Gypsy 1 768 -5804 5 709 7944 0 0 1 chr3R 16340056 16340908 -11564145 + NOMAD_I LTR Gypsy 5722 6572 0 5 709 4792 4 0 0 chr3R 16340908 16341426 -11563627 + NOMAD_LTR LTR Gypsy 1 518 0 5 709 27 0 0 0 chr3R 16342441 16342468 -11562585 + AT_rich Low_complexity Low_complexity 1 27 0 5 709 212 159 0 43 chr3R 16344957 16345003 -11560050 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 5 709 211 93 47 0 chr3R 16345450 16345493 -11559560 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 709 288 148 0 0 chr3R 16350795 16350856 -11554197 + (GATTG)n Simple_repeat Simple_repeat 4 64 0 5 709 217 219 0 0 chr3R 16352771 16352812 -11552241 + (CCCA)n Simple_repeat Simple_repeat 2 42 0 5 709 26 30 0 0 chr3R 16355114 16355147 -11549906 + AT_rich Low_complexity Low_complexity 1 33 0 5 709 24 0 0 0 chr3R 16356315 16356339 -11548714 + AT_rich Low_complexity Low_complexity 1 24 0 5 709 24 32 0 0 chr3R 16362025 16362056 -11542997 + AT_rich Low_complexity Low_complexity 1 31 0 5 709 203 189 0 0 chr3R 16362434 16362471 -11542582 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 709 23 0 0 0 chr3R 16370923 16370946 -11534107 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 26 30 0 0 chr3R 16371014 16371047 -11534006 + AT_rich Low_complexity Low_complexity 1 33 0 5 709 347 169 0 30 chr3R 16373228 16373295 -11531758 + DNAREP1_DM LINE Penelope 368 432 -162 5 709 23 54 0 0 chr3R 16374550 16374587 -11530466 + AT_rich Low_complexity Low_complexity 1 37 0 5 709 22 35 0 0 chr3R 16375962 16375991 -11529062 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 254 308 13 0 chr3R 16381673 16381751 -11523302 + (TATG)n Simple_repeat Simple_repeat 1 79 0 5 709 31 58 0 0 chr3R 16383672 16383724 -11521329 + AT_rich Low_complexity Low_complexity 1 52 0 5 710 264 212 15 0 chr3R 16386782 16386848 -11518205 + ROO_I LTR Pao 702 768 -7488 5 710 213 154 0 0 chr3R 16391569 16391608 -11513445 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 5 710 22 0 0 0 chr3R 16394023 16394045 -11511008 + AT_rich Low_complexity Low_complexity 1 22 0 5 710 186 167 0 0 chr3R 16394839 16394875 -11510178 + (CATA)n Simple_repeat Simple_repeat 2 37 0 5 710 26 50 0 0 chr3R 16396718 16396758 -11508295 + AT_rich Low_complexity Low_complexity 1 40 0 5 710 31 58 0 0 chr3R 16401712 16401764 -11503289 + AT_rich Low_complexity Low_complexity 1 52 0 5 710 39 60 0 0 chr3R 16403785 16403852 -11501201 + AT_rich Low_complexity Low_complexity 1 67 0 5 710 287 250 0 0 chr3R 16409379 16409467 -11495586 + (TTG)n Simple_repeat Simple_repeat 1 88 0 5 710 234 136 0 0 chr3R 16409472 16409516 -11495537 + (TGG)n Simple_repeat Simple_repeat 3 46 0 5 710 22 56 0 0 chr3R 16414336 16414372 -11490681 + AT_rich Low_complexity Low_complexity 1 36 0 5 710 21 36 0 0 chr3R 16418598 16418626 -11486427 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 22 35 0 0 chr3R 16420750 16420779 -11484274 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 21 36 0 0 chr3R 16421951 16421979 -11483074 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 860 245 152 26 chr3R 16427701 16427880 -11477173 - DNAREP1_DM LINE Penelope -38 556 357 5 710 243 122 0 0 chr3R 16427880 16427929 -11477124 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 5 710 860 245 152 26 chr3R 16427929 16428130 -11476923 - DNAREP1_DM LINE Penelope -238 356 128 5 710 276 263 0 38 chr3R 16429737 16429816 -11475237 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 5 710 21 36 0 0 chr3R 16433404 16433432 -11471621 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 25 0 0 0 chr3R 16436072 16436097 -11468956 + AT_rich Low_complexity Low_complexity 1 25 0 5 710 23 0 0 0 chr3R 16437293 16437316 -11467737 + AT_rich Low_complexity Low_complexity 1 23 0 5 710 198 118 0 0 chr3R 16437729 16437763 -11467290 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 710 328 174 82 52 chr3R 16438892 16438989 -11466064 + DNAREP1_DM LINE Penelope 367 466 -128 5 710 39 0 0 0 chr3R 16441927 16441966 -11463087 + AT_rich Low_complexity Low_complexity 1 39 0 5 710 200 114 22 43 chr3R 16443108 16443154 -11461899 + A-rich Low_complexity Low_complexity 2 46 0 5 710 263 148 0 36 chr3R 16444871 16444955 -11460098 + ROO_I LTR Pao 653 733 -7523 5 710 24 0 0 0 chr3R 16446962 16446986 -11458067 + AT_rich Low_complexity Low_complexity 1 24 0 5 710 23 0 0 0 chr3R 16447711 16447734 -11457319 + AT_rich Low_complexity Low_complexity 1 23 0 5 710 260 199 17 69 chr3R 16448339 16448500 -11456553 + ROO_I LTR Pao 643 743 -7513 5 710 232 188 21 0 chr3R 16451735 16451783 -11453270 + (CAG)n Simple_repeat Simple_repeat 2 50 0 5 710 21 36 0 0 chr3R 16453861 16453889 -11451164 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 25 31 0 0 chr3R 16454527 16454559 -11450494 + AT_rich Low_complexity Low_complexity 1 32 0 5 710 29 0 0 0 chr3R 16460615 16460644 -11444409 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 28 0 0 0 chr3R 16460961 16460989 -11444064 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 33 0 0 0 chr3R 16470073 16470106 -11434947 + AT_rich Low_complexity Low_complexity 1 33 0 5 710 25 31 0 0 chr3R 16473543 16473575 -11431478 + AT_rich Low_complexity Low_complexity 1 32 0 5 710 201 39 0 0 chr3R 16474344 16474370 -11430683 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 710 24 53 0 0 chr3R 16474709 16474747 -11430306 + AT_rich Low_complexity Low_complexity 1 38 0 5 710 22 35 0 0 chr3R 16476886 16476915 -11428138 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 233 169 12 35 chr3R 16482610 16482696 -11422357 + (CAG)n Simple_repeat Simple_repeat 2 85 0 5 710 23 33 0 0 chr3R 16485631 16485661 -11419392 + AT_rich Low_complexity Low_complexity 1 30 0 5 710 300 181 265 0 chr3R 16485773 16485856 -11419197 + DNAREP1_DM LINE Penelope 468 572 -22 5 710 218 191 0 0 chr3R 16491190 16491237 -11413816 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 5 710 186 43 0 0 chr3R 16491356 16491379 -11413674 + (AATTG)n Simple_repeat Simple_repeat 3 25 0 5 710 30 45 0 0 chr3R 16494034 16494078 -11410975 + AT_rich Low_complexity Low_complexity 1 44 0 5 710 41 0 0 0 chr3R 16496729 16496770 -11408283 + AT_rich Low_complexity Low_complexity 1 41 0 5 710 21 57 0 0 chr3R 16498709 16498744 -11406309 + AT_rich Low_complexity Low_complexity 1 35 0 5 710 21 36 0 0 chr3R 16500978 16501006 -11404047 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 213 196 0 0 chr3R 16502451 16502507 -11402546 + (CCG)n Simple_repeat Simple_repeat 2 57 0 5 710 36 40 0 0 chr3R 16503437 16503487 -11401566 + AT_rich Low_complexity Low_complexity 1 50 0 5 710 22 56 0 0 chr3R 16504808 16504844 -11400209 + AT_rich Low_complexity Low_complexity 1 36 0 5 710 21 57 0 0 chr3R 16509906 16509941 -11395112 + AT_rich Low_complexity Low_complexity 1 35 0 5 711 23 0 0 0 chr3R 16521748 16521771 -11383282 + AT_rich Low_complexity Low_complexity 1 23 0 5 711 240 35 0 0 chr3R 16523884 16523913 -11381140 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 711 351 0 0 0 chr3R 16524588 16524627 -11380426 + (AGTAG)n Simple_repeat Simple_repeat 4 42 0 5 711 210 150 0 0 chr3R 16525046 16525086 -11379967 + (AATTG)n Simple_repeat Simple_repeat 3 42 0 5 711 23 54 0 0 chr3R 16531404 16531441 -11373612 + AT_rich Low_complexity Low_complexity 1 37 0 5 711 24 0 0 0 chr3R 16531496 16531520 -11373533 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 278 182 0 15 chr3R 16532957 16533024 -11372029 + (CCGAA)n Simple_repeat Simple_repeat 5 70 0 5 711 211 200 0 0 chr3R 16537026 16537066 -11367987 + T-rich Low_complexity Low_complexity 3 42 0 5 711 25 65 0 0 chr3R 16537562 16537608 -11367445 + AT_rich Low_complexity Low_complexity 1 46 0 5 711 212 59 29 0 chr3R 16538351 16538385 -11366668 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 711 216 67 0 0 chr3R 16542054 16542084 -11362969 + (CAGTT)n Simple_repeat Simple_repeat 4 33 0 5 711 23 33 0 0 chr3R 16545121 16545151 -11359902 + AT_rich Low_complexity Low_complexity 1 30 0 5 711 24 0 0 0 chr3R 16554569 16554593 -11350460 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 30 27 0 0 chr3R 16556926 16556963 -11348090 + AT_rich Low_complexity Low_complexity 1 37 0 5 711 24 0 0 0 chr3R 16561169 16561193 -11343860 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 26 0 0 0 chr3R 16565392 16565418 -11339635 + AT_rich Low_complexity Low_complexity 1 26 0 5 711 183 162 0 0 chr3R 16566105 16566142 -11338911 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 711 23 0 0 0 chr3R 16566858 16566881 -11338172 + AT_rich Low_complexity Low_complexity 1 23 0 5 711 26 30 0 0 chr3R 16569672 16569705 -11335348 + AT_rich Low_complexity Low_complexity 1 33 0 5 711 27 0 0 0 chr3R 16571378 16571405 -11333648 + AT_rich Low_complexity Low_complexity 1 27 0 5 711 222 37 0 0 chr3R 16571993 16572020 -11333033 + (TTGG)n Simple_repeat Simple_repeat 1 27 0 5 711 24 0 0 0 chr3R 16576371 16576395 -11328658 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 201 331 0 16 chr3R 16576811 16576937 -11328116 + (TA)n Simple_repeat Simple_repeat 2 125 0 5 711 180 77 0 0 chr3R 16578371 16578397 -11326656 + (GTTTG)n Simple_repeat Simple_repeat 1 26 0 5 711 204 40 0 0 chr3R 16579016 16579041 -11326012 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 711 225 0 0 0 chr3R 16579363 16579388 -11325665 + (A)n Simple_repeat Simple_repeat 1 25 0 5 711 373 264 0 0 chr3R 16580861 16580986 -11324067 + (CAG)n Simple_repeat Simple_repeat 1 125 0 5 711 213 108 0 0 chr3R 16584046 16584083 -11320970 + (CTG)n Simple_repeat Simple_repeat 2 38 0 5 711 27 81 0 0 chr3R 16588860 16588922 -11316131 + AT_rich Low_complexity Low_complexity 1 62 0 5 711 22 56 0 0 chr3R 16589914 16589950 -11315103 + AT_rich Low_complexity Low_complexity 1 36 0 5 711 205 200 50 0 chr3R 16591212 16591272 -11313781 + A-rich Low_complexity Low_complexity 2 64 0 5 711 192 40 0 0 chr3R 16591382 16591407 -11313646 + (TCG)n Simple_repeat Simple_repeat 1 25 0 5 711 218 32 0 31 chr3R 16592579 16592611 -11312442 + (CAGAC)n Simple_repeat Simple_repeat 5 35 0 5 711 21 0 0 0 chr3R 16593565 16593586 -11311467 + AT_rich Low_complexity Low_complexity 1 21 0 5 711 24 0 0 0 chr3R 16595856 16595880 -11309173 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 261 0 0 0 chr3R 16596217 16596246 -11308807 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 711 245 53 0 50 chr3R 16597177 16597217 -11307836 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 5 711 22 70 0 0 chr3R 16597235 16597278 -11307775 + AT_rich Low_complexity Low_complexity 1 43 0 5 711 26 93 0 0 chr3R 16597432 16597507 -11307546 + AT_rich Low_complexity Low_complexity 1 75 0 5 711 24 0 0 0 chr3R 16599554 16599578 -11305475 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 180 125 0 0 chr3R 16601071 16601103 -11303950 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 711 246 105 0 0 chr3R 16601278 16601316 -11303737 + (ATGGTG)n Simple_repeat Simple_repeat 1 38 0 5 711 22 35 0 0 chr3R 16602120 16602149 -11302904 + AT_rich Low_complexity Low_complexity 1 29 0 5 711 223 203 17 17 chr3R 16605310 16605370 -11299683 + A-rich Low_complexity Low_complexity 3 62 0 5 711 192 77 0 0 chr3R 16606442 16606468 -11298585 + (CAT)n Simple_repeat Simple_repeat 1 26 0 5 711 22 0 0 0 chr3R 16606849 16606871 -11298182 + AT_rich Low_complexity Low_complexity 1 22 0 5 711 36 0 0 0 chr3R 16608077 16608113 -11296940 + AT_rich Low_complexity Low_complexity 1 36 0 5 711 180 0 0 0 chr3R 16608365 16608385 -11296668 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 711 22 0 0 0 chr3R 16609541 16609563 -11295490 + AT_rich Low_complexity Low_complexity 1 22 0 5 711 180 125 0 0 chr3R 16609732 16609764 -11295289 + (AAATG)n Simple_repeat Simple_repeat 1 32 0 5 711 183 42 0 0 chr3R 16609997 16610021 -11295032 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 711 211 244 38 25 chr3R 16611515 16611595 -11293458 + (CATGC)n Simple_repeat Simple_repeat 3 83 0 5 711 197 132 0 26 chr3R 16612705 16612744 -11292309 + (TCCG)n Simple_repeat Simple_repeat 4 41 0 5 711 198 71 0 0 chr3R 16614602 16614630 -11290423 + (T)n Simple_repeat Simple_repeat 1 28 0 5 711 195 69 0 0 chr3R 16616306 16616335 -11288718 + (T)n Simple_repeat Simple_repeat 1 29 0 5 711 266 206 47 16 chr3R 16616437 16616501 -11288552 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 5 711 25 75 0 0 chr3R 16617399 16617452 -11287601 + AT_rich Low_complexity Low_complexity 1 53 0 5 711 186 43 0 0 chr3R 16618316 16618339 -11286714 + (CAGCC)n Simple_repeat Simple_repeat 5 27 0 5 711 28 0 0 0 chr3R 16619358 16619386 -11285667 + AT_rich Low_complexity Low_complexity 1 28 0 5 711 198 0 0 0 chr3R 16621072 16621094 -11283959 + (A)n Simple_repeat Simple_repeat 1 22 0 5 711 210 37 0 0 chr3R 16623832 16623859 -11281194 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 711 193 135 39 0 chr3R 16624418 16624470 -11280583 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 711 21 0 0 0 chr3R 16626654 16626675 -11278378 + AT_rich Low_complexity Low_complexity 1 21 0 5 711 25 0 0 0 chr3R 16626735 16626760 -11278293 + AT_rich Low_complexity Low_complexity 1 25 0 5 711 248 120 0 20 chr3R 16627845 16627896 -11277157 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 711 251 222 0 12 chr3R 16627924 16628006 -11277047 + (ATG)n Simple_repeat Simple_repeat 1 81 0 5 711 211 93 23 23 chr3R 16628106 16628150 -11276903 + (CGG)n Simple_repeat Simple_repeat 2 45 0 5 711 239 200 0 71 chr3R 16628338 16628451 -11276602 + A-rich Low_complexity Low_complexity 4 108 0 5 711 241 177 12 60 chr3R 16628360 16628444 -11276609 + (CAAAT)n Simple_repeat Simple_repeat 2 81 0 5 711 27 29 0 0 chr3R 16629692 16629726 -11275327 + AT_rich Low_complexity Low_complexity 1 34 0 5 711 207 0 0 0 chr3R 16631048 16631071 -11273982 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 711 225 139 0 0 chr3R 16631884 16631927 -11273126 + (CAA)n Simple_repeat Simple_repeat 2 44 0 5 711 30 59 0 0 chr3R 16633715 16633766 -11271287 + AT_rich Low_complexity Low_complexity 1 51 0 5 711 231 191 31 31 chr3R 16633957 16634022 -11271031 + A-rich Low_complexity Low_complexity 1 65 0 5 711 222 128 0 0 chr3R 16634137 16634176 -11270877 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 711 26 0 0 0 chr3R 16634596 16634622 -11270431 + AT_rich Low_complexity Low_complexity 1 26 0 5 711 200 200 25 0 chr3R 16635223 16635263 -11269790 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 711 257 206 14 14 chr3R 16635476 16635550 -11269503 + (TA)n Simple_repeat Simple_repeat 1 74 0 5 711 25 0 0 0 chr3R 16635598 16635623 -11269430 + AT_rich Low_complexity Low_complexity 1 25 0 5 711 21 0 0 0 chr3R 16636238 16636259 -11268794 + AT_rich Low_complexity Low_complexity 1 21 0 5 711 26 0 0 0 chr3R 16640136 16640162 -11264891 + AT_rich Low_complexity Low_complexity 1 26 0 5 711 411 106 0 0 chr3R 16645925 16645991 -11259062 + (CTG)n Simple_repeat Simple_repeat 2 67 0 5 712 317 250 0 0 chr3R 16646935 16647023 -11258030 + (CTG)n Simple_repeat Simple_repeat 3 90 0 5 712 215 293 0 0 chr3R 16647185 16647267 -11257786 + (CTG)n Simple_repeat Simple_repeat 3 84 0 5 712 23 0 0 0 chr3R 16655289 16655312 -11249741 + AT_rich Low_complexity Low_complexity 1 23 0 5 712 26 0 0 0 chr3R 16656441 16656467 -11248586 + AT_rich Low_complexity Low_complexity 1 26 0 5 712 22 0 0 0 chr3R 16656622 16656644 -11248409 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 202 234 21 0 chr3R 16659067 16659114 -11245939 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 712 23 86 0 0 chr3R 16660391 16660449 -11244604 + AT_rich Low_complexity Low_complexity 1 58 0 5 712 29 0 0 0 chr3R 16663698 16663727 -11241326 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 232 276 0 0 chr3R 16664527 16664585 -11240468 + (CGG)n Simple_repeat Simple_repeat 1 58 0 5 712 209 184 0 0 chr3R 16665373 16665411 -11239642 + (CCAA)n Simple_repeat Simple_repeat 3 40 0 5 712 601 212 20 14 chr3R 16666106 16666254 -11238799 - DNAREP1_DM LINE Penelope -83 511 363 5 712 22 35 0 0 chr3R 16667348 16667377 -11237676 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 21 0 0 0 chr3R 16667428 16667449 -11237604 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 945 248 155 0 chr3R 16671012 16671334 -11233719 - DMCR1A LINE CR1 -1234 3236 2865 5 712 215 227 0 0 chr3R 16672011 16672055 -11232998 + (GAATG)n Simple_repeat Simple_repeat 5 48 0 5 712 25 0 0 0 chr3R 16674347 16674372 -11230681 + AT_rich Low_complexity Low_complexity 1 25 0 5 712 29 28 0 0 chr3R 16675899 16675935 -11229118 + AT_rich Low_complexity Low_complexity 1 36 0 5 712 189 74 0 0 chr3R 16676948 16676975 -11228078 + (GAA)n Simple_repeat Simple_repeat 3 29 0 5 712 24 67 0 0 chr3R 16680150 16680195 -11224858 + AT_rich Low_complexity Low_complexity 1 45 0 5 712 43654 0 0 0 chr3R 16680267 16684987 -11220066 + DOC LINE Jockey 4 4723 -2 5 712 281 207 11 0 chr3R 16686385 16686472 -11218581 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 712 22 0 0 0 chr3R 16696494 16696516 -11208537 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 21 36 0 0 chr3R 16697383 16697411 -11207642 + AT_rich Low_complexity Low_complexity 1 28 0 5 712 23 33 0 0 chr3R 16697770 16697800 -11207253 + AT_rich Low_complexity Low_complexity 1 30 0 5 712 399 250 61 61 chr3R 16697872 16698004 -11207049 - DNAREP1_DM LINE Penelope -96 498 367 5 712 198 167 0 0 chr3R 16701739 16701775 -11203278 + (CCGAG)n Simple_repeat Simple_repeat 1 36 0 5 712 22 0 0 0 chr3R 16703235 16703257 -11201796 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 213 180 0 0 chr3R 16706137 16706187 -11198866 + (CACCAT)n Simple_repeat Simple_repeat 6 55 0 5 712 243 88 0 0 chr3R 16707264 16707298 -11197755 + (CATA)n Simple_repeat Simple_repeat 2 35 0 5 712 21 0 0 0 chr3R 16709211 16709232 -11195821 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 26 64 0 0 chr3R 16713342 16713389 -11191664 + AT_rich Low_complexity Low_complexity 1 47 0 5 712 203 152 0 0 chr3R 16713842 16713875 -11191178 + (ACTG)n Simple_repeat Simple_repeat 3 35 0 5 712 24 32 0 0 chr3R 16715473 16715504 -11189549 + AT_rich Low_complexity Low_complexity 1 31 0 5 712 21 0 0 0 chr3R 16715546 16715567 -11189486 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 22 0 0 0 chr3R 16716242 16716264 -11188789 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 21 0 0 0 chr3R 16716630 16716651 -11188402 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 21 57 0 0 chr3R 16717455 16717490 -11187563 + AT_rich Low_complexity Low_complexity 1 35 0 5 712 253 208 39 68 chr3R 16719009 16719112 -11185941 - DNAREP1_DM LINE Penelope -18 576 477 5 712 200 208 0 0 chr3R 16720459 16720507 -11184546 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 712 23 0 0 0 chr3R 16724287 16724310 -11180743 + AT_rich Low_complexity Low_complexity 1 23 0 5 712 236 30 30 0 chr3R 16724721 16724754 -11180299 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 712 222 80 0 57 chr3R 16725615 16725668 -11179385 + (TAAAAA)n Simple_repeat Simple_repeat 3 52 0 5 712 22 35 0 0 chr3R 16726423 16726452 -11178601 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 21 82 0 0 chr3R 16729492 16729541 -11175512 + AT_rich Low_complexity Low_complexity 1 49 0 5 712 44 0 0 0 chr3R 16731778 16731822 -11173231 + AT_rich Low_complexity Low_complexity 1 44 0 5 712 1055 205 74 18 chr3R 16733924 16734207 -11170846 + DNAREP1_DM LINE Penelope 1 299 -295 5 712 27 0 0 0 chr3R 16735699 16735726 -11169327 + AT_rich Low_complexity Low_complexity 1 27 0 5 712 216 97 0 0 chr3R 16735825 16735856 -11169197 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 712 202 139 28 0 chr3R 16737180 16737216 -11167837 + (TTAG)n Simple_repeat Simple_repeat 4 40 0 5 712 30 69 0 0 chr3R 16739073 16739131 -11165922 + AT_rich Low_complexity Low_complexity 1 58 0 5 712 258 219 24 30 chr3R 16740072 16740182 -11164871 + A-rich Low_complexity Low_complexity 1 109 0 5 712 21 57 0 0 chr3R 16740660 16740695 -11164358 + AT_rich Low_complexity Low_complexity 1 35 0 5 712 22 0 0 0 chr3R 16742994 16743016 -11162037 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 21 0 0 0 chr3R 16745777 16745798 -11159255 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 200 135 0 26 chr3R 16751158 16751196 -11153857 + A-rich Low_complexity Low_complexity 2 38 0 5 712 262 220 0 0 chr3R 16753516 16753566 -11151487 - DNAREP1_DM LINE Penelope -542 52 3 5 712 300 119 0 0 chr3R 16756130 16756189 -11148864 + (CTG)n Simple_repeat Simple_repeat 3 61 0 5 712 22 56 0 0 chr3R 16756784 16756820 -11148233 + AT_rich Low_complexity Low_complexity 1 36 0 5 712 232 208 38 0 chr3R 16757849 16757902 -11147151 + (CAGC)n Simple_repeat Simple_repeat 3 57 0 5 712 203 173 19 0 chr3R 16758708 16758760 -11146293 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 712 202 135 27 0 chr3R 16759033 16759070 -11145983 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 712 26 50 0 0 chr3R 16759434 16759474 -11145579 + AT_rich Low_complexity Low_complexity 1 40 0 5 712 309 151 0 0 chr3R 16761011 16761064 -11143989 + (ATG)n Simple_repeat Simple_repeat 3 55 0 5 712 27 0 0 0 chr3R 16761731 16761758 -11143295 + AT_rich Low_complexity Low_complexity 1 27 0 5 712 344 156 62 38 chr3R 16763731 16763811 -11141242 - DNAREP1_DM LINE Penelope 0 594 513 5 712 183 186 0 0 chr3R 16765008 16765051 -11140002 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 712 21 0 0 0 chr3R 16765445 16765466 -11139587 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 180 167 0 0 chr3R 16766335 16766383 -11138670 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 712 231 36 0 0 chr3R 16767402 16767430 -11137623 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 712 22 35 0 0 chr3R 16768540 16768569 -11136484 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 271 180 101 0 chr3R 16771105 16771194 -11133859 - ROO_I LTR Pao -7513 743 646 5 712 200 217 0 0 chr3R 16772117 16772163 -11132890 + T-rich Low_complexity Low_complexity 1 46 0 5 712 216 288 0 0 chr3R 16774771 16774830 -11130223 + (CTG)n Simple_repeat Simple_repeat 1 59 0 5 712 330 123 0 0 chr3R 16775058 16775115 -11129938 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 712 40 21 0 0 chr3R 16775882 16775929 -11129124 + AT_rich Low_complexity Low_complexity 1 47 0 5 713 25 0 0 0 chr3R 16778167 16778192 -11126861 + AT_rich Low_complexity Low_complexity 1 25 0 5 713 183 42 0 0 chr3R 16778333 16778357 -11126696 + (A)n Simple_repeat Simple_repeat 1 24 0 5 713 180 0 0 0 chr3R 16780561 16780581 -11124472 + (T)n Simple_repeat Simple_repeat 1 20 0 5 713 209 200 0 0 chr3R 16782713 16782758 -11122295 + CT-rich Low_complexity Low_complexity 2 46 0 5 713 217 254 0 0 chr3R 16783884 16783939 -11121114 + A-rich Low_complexity Low_complexity 1 55 0 5 713 23 0 0 0 chr3R 16785448 16785471 -11119582 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 246 160 20 20 chr3R 16787872 16787923 -11117130 + (CCCGAA)n Simple_repeat Simple_repeat 6 56 0 5 713 191 61 30 0 chr3R 16792958 16792991 -11112062 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 713 194 119 0 45 chr3R 16794259 16794303 -11110750 + (CCAA)n Simple_repeat Simple_repeat 1 42 0 5 713 219 88 0 0 chr3R 16795361 16795395 -11109658 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 713 28 48 0 0 chr3R 16796406 16796448 -11108605 + AT_rich Low_complexity Low_complexity 1 42 0 5 713 224 231 13 0 chr3R 16799799 16799877 -11105176 + (CAA)n Simple_repeat Simple_repeat 3 81 0 5 713 34 0 0 0 chr3R 16799898 16799932 -11105121 + AT_rich Low_complexity Low_complexity 1 34 0 5 713 212 227 30 0 chr3R 16799996 16800062 -11104991 + A-rich Low_complexity Low_complexity 3 70 0 5 713 215 232 40 20 chr3R 16800047 16800148 -11104905 + (CAA)n Simple_repeat Simple_repeat 2 104 0 5 713 294 115 0 0 chr3R 16800229 16800281 -11104772 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 713 240 169 0 63 chr3R 16800957 16801020 -11104033 + A-rich Low_complexity Low_complexity 2 60 0 5 713 248 70 0 23 chr3R 16801151 16801195 -11103858 + (CAAAAA)n Simple_repeat Simple_repeat 3 45 0 5 713 23 78 0 0 chr3R 16802910 16802961 -11102092 + AT_rich Low_complexity Low_complexity 1 51 0 5 713 32 0 0 0 chr3R 16803229 16803261 -11101792 + AT_rich Low_complexity Low_complexity 1 32 0 5 713 204 184 0 0 chr3R 16803976 16804025 -11101028 + (CAA)n Simple_repeat Simple_repeat 3 51 0 5 713 278 234 36 9 chr3R 16810618 16810730 -11094323 + (CA)n Simple_repeat Simple_repeat 2 116 0 5 713 279 283 21 32 chr3R 16815617 16815712 -11089341 - DNAREP1_DM LINE Penelope -495 99 6 5 713 192 158 0 50 chr3R 16818117 16818177 -11086876 + (CAG)n Simple_repeat Simple_repeat 3 59 0 5 713 21 0 0 0 chr3R 16823672 16823693 -11081360 + AT_rich Low_complexity Low_complexity 1 21 0 5 713 389 181 0 0 chr3R 16826356 16826428 -11078625 - DNAREP1_DM LINE Penelope 0 594 523 5 713 28 0 0 0 chr3R 16826462 16826490 -11078563 + AT_rich Low_complexity Low_complexity 1 28 0 5 713 234 136 0 0 chr3R 16835761 16835805 -11069248 + (ATCTG)n Simple_repeat Simple_repeat 3 46 0 5 713 27 49 0 0 chr3R 16840152 16840193 -11064860 + AT_rich Low_complexity Low_complexity 1 41 0 5 713 219 69 0 0 chr3R 16842054 16842083 -11062970 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 713 186 43 0 0 chr3R 16842804 16842827 -11062226 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 713 42 36 0 0 chr3R 16843110 16843166 -11061887 + AT_rich Low_complexity Low_complexity 1 56 0 5 713 247 127 32 0 chr3R 16843166 16843229 -11061824 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 713 301 161 54 0 chr3R 16843255 16843311 -11061742 - DNAREP1_DM LINE Penelope -535 59 1 5 713 362 273 0 24 chr3R 16843984 16844108 -11060945 + GA-rich Low_complexity Low_complexity 5 125 0 5 713 30 0 0 0 chr3R 16846773 16846803 -11058250 + AT_rich Low_complexity Low_complexity 1 30 0 5 713 207 281 0 0 chr3R 16850028 16850092 -11054961 + A-rich Low_complexity Low_complexity 1 64 0 5 713 21 0 0 0 chr3R 16859241 16859262 -11045791 + AT_rich Low_complexity Low_complexity 1 21 0 5 713 25 31 0 0 chr3R 16868582 16868614 -11036439 + AT_rich Low_complexity Low_complexity 1 32 0 5 713 23 0 0 0 chr3R 16870585 16870608 -11034445 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 189 0 0 0 chr3R 16872608 16872629 -11032424 + (T)n Simple_repeat Simple_repeat 1 21 0 5 713 23 0 0 0 chr3R 16875660 16875683 -11029370 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 23 54 0 0 chr3R 16878751 16878788 -11026265 + AT_rich Low_complexity Low_complexity 1 37 0 5 713 22 56 0 0 chr3R 16880178 16880214 -11024839 + AT_rich Low_complexity Low_complexity 1 36 0 5 713 198 143 0 0 chr3R 16886579 16886614 -11018439 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 713 24 67 0 0 chr3R 16890559 16890604 -11014449 + AT_rich Low_complexity Low_complexity 1 45 0 5 713 21 0 0 0 chr3R 16902564 16902585 -11002468 + AT_rich Low_complexity Low_complexity 1 21 0 5 713 180 0 0 0 chr3R 16906738 16906758 -10998295 + (CACTC)n Simple_repeat Simple_repeat 1 20 0 5 714 318 50 0 0 chr3R 16908686 16908726 -10996327 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 714 228 111 0 0 chr3R 16915894 16915930 -10989123 + (CAG)n Simple_repeat Simple_repeat 2 37 0 5 714 204 67 0 0 chr3R 16916426 16916456 -10988597 + (CAGT)n Simple_repeat Simple_repeat 1 30 0 5 714 195 42 0 0 chr3R 16917188 16917212 -10987841 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 714 24 77 0 0 chr3R 16919906 16919958 -10985095 + AT_rich Low_complexity Low_complexity 1 52 0 5 714 180 0 0 0 chr3R 16922217 16922237 -10982816 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 714 244 231 0 37 chr3R 16923017 16923098 -10981955 + (CTG)n Simple_repeat Simple_repeat 2 79 0 5 714 29 0 0 0 chr3R 16923157 16923186 -10981867 + AT_rich Low_complexity Low_complexity 1 29 0 5 714 228 246 0 0 chr3R 16923288 16923345 -10981708 - ROO_I LTR Pao -7524 732 676 5 714 22 0 0 0 chr3R 16927675 16927697 -10977356 + AT_rich Low_complexity Low_complexity 1 22 0 5 714 232 226 0 0 chr3R 16928060 16928113 -10976940 + ROO_I LTR Pao 651 703 -7553 5 714 30 0 0 0 chr3R 16933956 16933986 -10971067 + AT_rich Low_complexity Low_complexity 1 30 0 5 714 26 30 0 0 chr3R 16936592 16936625 -10968428 + AT_rich Low_complexity Low_complexity 1 33 0 5 714 183 80 0 0 chr3R 16939558 16939583 -10965470 + (CACGC)n Simple_repeat Simple_repeat 4 28 0 5 714 206 355 0 0 chr3R 16941145 16941238 -10963815 + (CAG)n Simple_repeat Simple_repeat 2 94 0 5 714 38 51 0 0 chr3R 16941533 16941592 -10963461 + AT_rich Low_complexity Low_complexity 1 59 0 5 714 26 0 0 0 chr3R 16941846 16941872 -10963181 + AT_rich Low_complexity Low_complexity 1 26 0 5 714 273 207 0 0 chr3R 16944683 16944741 -10960312 + DNAREP1_DM LINE Penelope 24 81 -513 5 714 207 133 0 43 chr3R 16946027 16946074 -10958979 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 714 25 31 0 0 chr3R 16947046 16947078 -10957975 + AT_rich Low_complexity Low_complexity 1 32 0 5 714 203 125 0 24 chr3R 16949046 16949087 -10955966 + (TCCG)n Simple_repeat Simple_repeat 2 41 0 5 714 203 61 30 0 chr3R 16951157 16951190 -10953863 + (TTG)n Simple_repeat Simple_repeat 3 36 0 5 714 27 81 0 0 chr3R 16959680 16959742 -10945311 + AT_rich Low_complexity Low_complexity 1 62 0 5 714 3779 7 0 0 chr3R 16967450 16967867 -10937186 - TIRANT_LTR LTR Gypsy 0 417 1 5 714 68113 2 0 1 chr3R 16967867 16975457 -10929596 - TIRANT_I LTR Gypsy 0 7692 1 5 714 3779 7 0 0 chr3R 16975457 16975874 -10929179 - TIRANT_LTR LTR Gypsy 0 417 1 5 714 24 0 0 0 chr3R 16982214 16982238 -10922815 + AT_rich Low_complexity Low_complexity 1 24 0 5 714 29 47 0 0 chr3R 16983621 16983664 -10921389 + AT_rich Low_complexity Low_complexity 1 43 0 5 714 22 56 0 0 chr3R 16994826 16994862 -10910191 + AT_rich Low_complexity Low_complexity 1 36 0 5 714 241 284 7 29 chr3R 16995307 16995445 -10909608 + A-rich Low_complexity Low_complexity 6 140 0 5 714 243 0 0 0 chr3R 16995514 16995541 -10909512 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 714 208 143 0 0 chr3R 16997822 16997857 -10907196 + (TTTTG)n Simple_repeat Simple_repeat 4 38 0 5 714 189 0 0 0 chr3R 17001205 17001226 -10903827 + (CAG)n Simple_repeat Simple_repeat 1 21 0 5 714 31 26 0 0 chr3R 17001392 17001430 -10903623 + AT_rich Low_complexity Low_complexity 1 38 0 5 714 270 56 0 0 chr3R 17002245 17002281 -10902772 + (TATAG)n Simple_repeat Simple_repeat 5 40 0 5 714 195 162 0 0 chr3R 17002400 17002437 -10902616 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 714 27 0 0 0 chr3R 17006829 17006856 -10898197 + AT_rich Low_complexity Low_complexity 1 27 0 5 714 23 33 0 0 chr3R 17006991 17007021 -10898032 + AT_rich Low_complexity Low_complexity 1 30 0 5 714 25 65 0 0 chr3R 17007233 17007279 -10897774 + AT_rich Low_complexity Low_complexity 1 46 0 5 714 35 24 0 0 chr3R 17011090 17011132 -10893921 + AT_rich Low_complexity Low_complexity 1 42 0 5 714 207 0 0 0 chr3R 17016551 17016574 -10888479 + (A)n Simple_repeat Simple_repeat 1 23 0 5 714 186 118 0 0 chr3R 17026622 17026656 -10878397 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 5 714 213 283 0 29 chr3R 17028389 17028491 -10876562 + GA-rich Low_complexity Low_complexity 2 100 0 5 714 345 173 0 12 chr3R 17031411 17031493 -10873560 + ROO_I LTR Pao 653 733 -7523 5 714 22 0 0 0 chr3R 17035867 17035889 -10869164 + AT_rich Low_complexity Low_complexity 1 22 0 5 714 180 0 0 0 chr3R 17037336 17037356 -10867697 + (TAGA)n Simple_repeat Simple_repeat 2 21 0 5 715 21 36 0 0 chr3R 17039739 17039767 -10865286 + AT_rich Low_complexity Low_complexity 1 28 0 5 715 30 59 0 0 chr3R 17039931 17039982 -10865071 + AT_rich Low_complexity Low_complexity 1 51 0 5 715 22 0 0 0 chr3R 17040311 17040333 -10864720 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 198 192 0 0 chr3R 17043089 17043141 -10861912 + (TCG)n Simple_repeat Simple_repeat 1 52 0 5 715 206 206 0 14 chr3R 17051198 17051272 -10853781 + (CAG)n Simple_repeat Simple_repeat 2 74 0 5 715 279 0 0 0 chr3R 17051602 17051633 -10853420 + (CAA)n Simple_repeat Simple_repeat 2 32 0 5 715 180 152 0 0 chr3R 17052569 17052602 -10852451 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 715 299 301 8 8 chr3R 17052621 17052745 -10852308 + (CAG)n Simple_repeat Simple_repeat 1 124 0 5 715 186 103 0 0 chr3R 17054001 17054030 -10851023 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 715 23 0 0 0 chr3R 17059569 17059592 -10845461 + AT_rich Low_complexity Low_complexity 1 23 0 5 715 204 40 0 0 chr3R 17063161 17063186 -10841867 + (AAATG)n Simple_repeat Simple_repeat 2 26 0 5 715 21 0 0 0 chr3R 17064424 17064445 -10840608 + AT_rich Low_complexity Low_complexity 1 21 0 5 715 22 0 0 0 chr3R 17066634 17066656 -10838397 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 405 200 0 62 chr3R 17067341 17067437 -10837616 - DNAREP1_DM LINE Penelope -2 592 503 5 715 30 89 0 0 chr3R 17071066 17071145 -10833908 + AT_rich Low_complexity Low_complexity 1 79 0 5 715 206 245 0 0 chr3R 17074745 17074798 -10830255 + T-rich Low_complexity Low_complexity 1 53 0 5 715 189 0 0 0 chr3R 17076465 17076486 -10828567 + (GTATG)n Simple_repeat Simple_repeat 5 25 0 5 715 24 32 0 0 chr3R 17077692 17077723 -10827330 + AT_rich Low_complexity Low_complexity 1 31 0 5 715 211 233 0 0 chr3R 17079720 17079763 -10825290 + (ATGGTG)n Simple_repeat Simple_repeat 4 46 0 5 715 189 0 0 0 chr3R 17080321 17080342 -10824711 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 5 715 400 150 0 0 chr3R 17080891 17080951 -10824102 - DNAREP1_DM LINE Penelope -534 60 1 5 715 207 0 0 0 chr3R 17082599 17082622 -10822431 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 715 205 75 24 24 chr3R 17084391 17084432 -10820621 + (CAG)n Simple_repeat Simple_repeat 3 43 0 5 715 240 246 0 0 chr3R 17084547 17084612 -10820441 + (CAG)n Simple_repeat Simple_repeat 3 67 0 5 715 257 208 38 0 chr3R 17085020 17085073 -10819980 - DNAREP1_DM LINE Penelope -136 458 404 5 715 24 53 0 0 chr3R 17086926 17086964 -10818089 + AT_rich Low_complexity Low_complexity 1 38 0 5 715 230 204 0 0 chr3R 17087110 17087154 -10817899 - DNAREP1_DM LINE Penelope -550 44 1 5 715 275 349 14 0 chr3R 17089110 17089256 -10815797 + (CATATA)n Simple_repeat Simple_repeat 2 149 0 5 715 24 77 0 0 chr3R 17091206 17091258 -10813795 + AT_rich Low_complexity Low_complexity 1 52 0 5 715 34 42 0 0 chr3R 17092602 17092650 -10812403 + AT_rich Low_complexity Low_complexity 1 48 0 5 715 27 92 0 0 chr3R 17093480 17093556 -10811497 + AT_rich Low_complexity Low_complexity 1 76 0 5 715 211 192 39 0 chr3R 17102422 17102474 -10802579 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 715 24 53 0 0 chr3R 17102874 17102912 -10802141 + AT_rich Low_complexity Low_complexity 1 38 0 5 715 25 0 0 0 chr3R 17107514 17107539 -10797514 + AT_rich Low_complexity Low_complexity 1 25 0 5 715 216 135 0 0 chr3R 17110438 17110475 -10794578 + (TGG)n Simple_repeat Simple_repeat 1 37 0 5 715 240 59 0 0 chr3R 17113077 17113111 -10791942 + (GAGTG)n Simple_repeat Simple_repeat 5 38 0 5 715 234 203 17 0 chr3R 17113871 17113930 -10791123 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 715 197 39 0 119 chr3R 17115395 17115454 -10789599 + (TTA)n Simple_repeat Simple_repeat 2 53 0 5 715 21 0 0 0 chr3R 17115454 17115475 -10789578 + AT_rich Low_complexity Low_complexity 1 21 0 5 715 228 135 0 0 chr3R 17115972 17116009 -10789044 + (TAGA)n Simple_repeat Simple_repeat 3 39 0 5 715 30 0 0 0 chr3R 17118986 17119016 -10786037 + AT_rich Low_complexity Low_complexity 1 30 0 5 715 189 121 0 0 chr3R 17120339 17120372 -10784681 + (CGAAA)n Simple_repeat Simple_repeat 2 34 0 5 715 758 140 148 66 chr3R 17121261 17121505 -10783548 - DNAREP1_DM LINE Penelope -330 264 1 5 715 31 26 0 0 chr3R 17135653 17135691 -10769362 + AT_rich Low_complexity Low_complexity 1 38 0 5 715 21 0 0 0 chr3R 17136568 17136589 -10768464 + AT_rich Low_complexity Low_complexity 1 21 0 5 715 26 0 0 0 chr3R 17138127 17138153 -10766900 + AT_rich Low_complexity Low_complexity 1 26 0 5 715 37 86 0 0 chr3R 17139032 17139125 -10765928 + AT_rich Low_complexity Low_complexity 1 93 0 5 715 22 0 0 0 chr3R 17140013 17140035 -10765018 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 26 0 0 0 chr3R 17141539 17141565 -10763488 + AT_rich Low_complexity Low_complexity 1 26 0 5 715 21 89 0 0 chr3R 17143971 17144027 -10761026 + AT_rich Low_complexity Low_complexity 1 56 0 5 715 211 184 0 0 chr3R 17148489 17148527 -10756526 + (TTCGGG)n Simple_repeat Simple_repeat 6 43 0 5 715 22 0 0 0 chr3R 17148818 17148840 -10756213 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 194 62 31 0 chr3R 17149497 17149529 -10755524 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 5 715 336 133 0 0 chr3R 17150040 17150100 -10754953 + (TAG)n Simple_repeat Simple_repeat 1 60 0 5 715 23 0 0 0 chr3R 17150232 17150255 -10754798 + AT_rich Low_complexity Low_complexity 1 23 0 5 715 227 250 28 0 chr3R 17150986 17151058 -10753995 + (TTGGGG)n Simple_repeat Simple_repeat 1 74 0 5 715 204 219 13 52 chr3R 17151382 17151459 -10753594 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 5 715 270 250 0 37 chr3R 17151865 17151973 -10753080 + (TG)n Simple_repeat Simple_repeat 2 105 0 5 715 213 151 0 0 chr3R 17152129 17152182 -10752871 + T-rich Low_complexity Low_complexity 1 53 0 5 715 294 87 0 0 chr3R 17152354 17152400 -10752653 + (CGAA)n Simple_repeat Simple_repeat 2 47 0 5 715 186 71 0 0 chr3R 17152526 17152554 -10752499 + (CAGAA)n Simple_repeat Simple_repeat 4 31 0 5 715 205 173 19 37 chr3R 17152705 17152759 -10752294 + (TAG)n Simple_repeat Simple_repeat 2 54 0 5 715 189 0 0 0 chr3R 17153170 17153191 -10751862 + (T)n Simple_repeat Simple_repeat 1 21 0 5 715 195 42 0 0 chr3R 17154724 17154748 -10750305 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 715 245 154 39 0 chr3R 17155026 17155078 -10749975 + (TATG)n Simple_repeat Simple_repeat 3 56 0 5 715 189 0 0 0 chr3R 17155170 17155191 -10749862 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 5 715 207 125 0 0 chr3R 17155706 17155746 -10749307 + (TCC)n Simple_repeat Simple_repeat 3 42 0 5 715 213 233 0 16 chr3R 17157216 17157277 -10747776 + (CAGA)n Simple_repeat Simple_repeat 2 61 0 5 715 278 197 0 0 chr3R 17158603 17158669 -10746384 + T-rich Low_complexity Low_complexity 2 67 0 5 715 34 42 0 0 chr3R 17158844 17158892 -10746161 + AT_rich Low_complexity Low_complexity 1 48 0 5 715 184 143 36 0 chr3R 17159486 17159542 -10745511 + (ATTG)n Simple_repeat Simple_repeat 2 59 0 5 715 198 0 0 0 chr3R 17159694 17159716 -10745337 + (T)n Simple_repeat Simple_repeat 1 22 0 5 715 235 250 0 32 chr3R 17162427 17162489 -10742564 + (CAG)n Simple_repeat Simple_repeat 2 61 0 5 715 236 409 7 7 chr3R 17164439 17164577 -10740476 + G-rich Low_complexity Low_complexity 6 143 0 5 715 204 40 0 0 chr3R 17165400 17165425 -10739628 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 715 218 230 54 0 chr3R 17167189 17167263 -10737790 + T-rich Low_complexity Low_complexity 1 78 0 5 715 304 294 9 9 chr3R 17168341 17168451 -10736602 + (CTG)n Simple_repeat Simple_repeat 1 110 0 5 715 252 111 0 0 chr3R 17168720 17168765 -10736288 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 716 207 88 0 0 chr3R 17171276 17171310 -10733743 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 716 300 261 0 0 chr3R 17174125 17174213 -10730840 + (TTG)n Simple_repeat Simple_repeat 2 89 0 5 716 38 0 0 0 chr3R 17176974 17177012 -10728041 + AT_rich Low_complexity Low_complexity 1 38 0 5 716 24 0 0 0 chr3R 17181369 17181393 -10723660 + AT_rich Low_complexity Low_complexity 1 24 0 5 716 25 0 0 0 chr3R 17185939 17185964 -10719089 + AT_rich Low_complexity Low_complexity 1 25 0 5 716 21 57 0 0 chr3R 17193514 17193549 -10711504 + AT_rich Low_complexity Low_complexity 1 35 0 5 716 22 35 0 0 chr3R 17194753 17194782 -10710271 + AT_rich Low_complexity Low_complexity 1 29 0 5 716 21 36 0 0 chr3R 17198061 17198089 -10706964 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 23 86 0 0 chr3R 17199386 17199444 -10705609 + AT_rich Low_complexity Low_complexity 1 58 0 5 716 230 270 40 0 chr3R 17203796 17203870 -10701183 + (TATG)n Simple_repeat Simple_repeat 4 80 0 5 716 22 0 0 0 chr3R 17205486 17205508 -10699545 + AT_rich Low_complexity Low_complexity 1 22 0 5 716 22 35 0 0 chr3R 17206910 17206939 -10698114 + AT_rich Low_complexity Low_complexity 1 29 0 5 716 226 137 0 56 chr3R 17207488 17207542 -10697511 + ROO_I LTR Pao 676 726 -7530 5 716 49 66 0 0 chr3R 17210056 17210147 -10694906 + AT_rich Low_complexity Low_complexity 1 91 0 5 716 326 212 68 39 chr3R 17211136 17211239 -10693814 - DNAREP1_DM LINE Penelope -16 578 473 5 716 27 73 0 0 chr3R 17212465 17212520 -10692533 + AT_rich Low_complexity Low_complexity 1 55 0 5 716 21 0 0 0 chr3R 17213828 17213849 -10691204 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 198 0 0 0 chr3R 17216951 17216973 -10688080 + (GGA)n Simple_repeat Simple_repeat 1 22 0 5 716 32 26 0 0 chr3R 17217318 17217357 -10687696 + AT_rich Low_complexity Low_complexity 1 39 0 5 716 26 50 0 0 chr3R 17217741 17217781 -10687272 + AT_rich Low_complexity Low_complexity 1 40 0 5 716 24 53 0 0 chr3R 17227337 17227375 -10677678 + AT_rich Low_complexity Low_complexity 1 38 0 5 716 29 28 0 0 chr3R 17228082 17228118 -10676935 + AT_rich Low_complexity Low_complexity 1 36 0 5 716 216 125 15 30 chr3R 17228480 17228546 -10676507 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 5 716 22 80 0 0 chr3R 17229313 17229363 -10675690 + AT_rich Low_complexity Low_complexity 1 50 0 5 716 21 0 0 0 chr3R 17232366 17232387 -10672666 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 21 36 0 0 chr3R 17234022 17234050 -10671003 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 373 230 221 7 chr3R 17234400 17234536 -10670517 - DNAREP1_DM LINE Penelope -1 593 429 5 716 205 262 0 0 chr3R 17236215 17236276 -10668777 + CT-rich Low_complexity Low_complexity 1 61 0 5 716 34 0 0 0 chr3R 17236627 17236661 -10668392 + AT_rich Low_complexity Low_complexity 1 34 0 5 716 215 205 0 0 chr3R 17240221 17240260 -10664793 + (CAGG)n Simple_repeat Simple_repeat 2 40 0 5 716 186 43 0 0 chr3R 17240566 17240589 -10664464 + (CAG)n Simple_repeat Simple_repeat 2 24 0 5 716 236 267 0 0 chr3R 17241070 17241130 -10663923 + (TTG)n Simple_repeat Simple_repeat 1 60 0 5 716 201 121 0 0 chr3R 17242554 17242587 -10662466 + (TCCA)n Simple_repeat Simple_repeat 2 34 0 5 716 43 47 0 0 chr3R 17244681 17244745 -10660308 + AT_rich Low_complexity Low_complexity 1 64 0 5 716 217 231 0 0 chr3R 17245147 17245199 -10659854 + (ATCTG)n Simple_repeat Simple_repeat 4 55 0 5 716 207 114 0 0 chr3R 17245399 17245434 -10659619 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 716 29 0 0 0 chr3R 17245831 17245860 -10659193 + AT_rich Low_complexity Low_complexity 1 29 0 5 716 21 0 0 0 chr3R 17251926 17251947 -10653106 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 210 150 0 0 chr3R 17254890 17254930 -10650123 + (AACTG)n Simple_repeat Simple_repeat 3 42 0 5 716 25 0 0 0 chr3R 17255461 17255486 -10649567 + AT_rich Low_complexity Low_complexity 1 25 0 5 716 217 226 0 16 chr3R 17258399 17258462 -10646591 + (CTGGGG)n Simple_repeat Simple_repeat 2 63 0 5 716 254 106 21 0 chr3R 17260177 17260224 -10644829 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 716 21 36 0 0 chr3R 17260748 17260776 -10644277 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 21 36 0 0 chr3R 17266567 17266595 -10638458 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 21 0 0 0 chr3R 17267081 17267102 -10637951 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 194 152 0 17 chr3R 17271600 17271660 -10633393 + (CTG)n Simple_repeat Simple_repeat 3 61 0 5 716 186 176 0 0 chr3R 17272153 17272204 -10632849 + CT-rich Low_complexity Low_complexity 1 51 0 5 716 29 28 0 0 chr3R 17272900 17272936 -10632117 + AT_rich Low_complexity Low_complexity 1 36 0 5 716 210 71 0 0 chr3R 17273460 17273488 -10631565 + (CAG)n Simple_repeat Simple_repeat 2 29 0 5 716 27 0 0 0 chr3R 17280099 17280126 -10624927 + AT_rich Low_complexity Low_complexity 1 27 0 5 716 26 0 0 0 chr3R 17285187 17285213 -10619840 + AT_rich Low_complexity Low_complexity 1 26 0 5 716 26 0 0 0 chr3R 17285261 17285287 -10619766 + AT_rich Low_complexity Low_complexity 1 26 0 5 716 33 43 0 0 chr3R 17285349 17285396 -10619657 + AT_rich Low_complexity Low_complexity 1 47 0 5 716 36 23 0 0 chr3R 17285436 17285479 -10619574 + AT_rich Low_complexity Low_complexity 1 43 0 5 716 25 48 0 46 chr3R 17285561 17285626 -10619427 + AT_rich Low_complexity Low_complexity 1 62 0 5 716 29 47 0 0 chr3R 17286765 17286808 -10618245 + AT_rich Low_complexity Low_complexity 1 43 0 5 716 210 71 0 0 chr3R 17287557 17287585 -10617468 + (CAGTT)n Simple_repeat Simple_repeat 1 28 0 5 716 243 61 0 0 chr3R 17287802 17287835 -10617218 + (CATCG)n Simple_repeat Simple_repeat 3 35 0 5 716 30 45 0 0 chr3R 17290966 17291010 -10614043 + AT_rich Low_complexity Low_complexity 1 44 0 5 716 40 21 0 0 chr3R 17291118 17291165 -10613888 + AT_rich Low_complexity Low_complexity 1 47 0 5 716 195 42 0 0 chr3R 17291534 17291558 -10613495 + (TCGGG)n Simple_repeat Simple_repeat 2 25 0 5 716 22 70 0 0 chr3R 17300901 17300944 -10604109 + AT_rich Low_complexity Low_complexity 1 43 0 5 717 236 171 0 0 chr3R 17305364 17305405 -10599648 - DNAREP1_DM LINE Penelope -544 50 10 5 717 563 207 210 10 chr3R 17314147 17314342 -10590711 + DNAREP1_DM LINE Penelope 361 594 0 5 717 352 191 0 0 chr3R 17321584 17321652 -10583401 + DNAREP1_DM LINE Penelope 364 431 -163 5 717 21 0 0 0 chr3R 17323002 17323023 -10582030 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 22 35 0 0 chr3R 17333351 17333380 -10571673 + AT_rich Low_complexity Low_complexity 1 29 0 5 717 24 32 0 0 chr3R 17338351 17338382 -10566671 + AT_rich Low_complexity Low_complexity 1 31 0 5 717 28 0 0 0 chr3R 17341446 17341474 -10563579 + AT_rich Low_complexity Low_complexity 1 28 0 5 717 236 77 26 0 chr3R 17343760 17343799 -10561254 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 717 21 36 0 0 chr3R 17345986 17346014 -10559039 + AT_rich Low_complexity Low_complexity 1 28 0 5 717 22 0 0 0 chr3R 17349436 17349458 -10555595 + AT_rich Low_complexity Low_complexity 1 22 0 5 717 44 56 0 0 chr3R 17353672 17353744 -10551309 + AT_rich Low_complexity Low_complexity 1 72 0 5 717 195 167 0 0 chr3R 17355255 17355297 -10549756 + (TGGG)n Simple_repeat Simple_repeat 2 43 0 5 717 183 42 0 0 chr3R 17356603 17356627 -10548426 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 717 25 75 0 0 chr3R 17361233 17361286 -10543767 + AT_rich Low_complexity Low_complexity 1 53 0 5 717 214 215 49 25 chr3R 17361838 17361919 -10543134 + (GGTTG)n Simple_repeat Simple_repeat 5 87 0 5 717 21 0 0 0 chr3R 17362001 17362022 -10543031 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 219 214 0 0 chr3R 17362380 17362422 -10542631 + (CTG)n Simple_repeat Simple_repeat 3 44 0 5 717 204 135 0 0 chr3R 17363647 17363684 -10541369 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 717 37 0 0 0 chr3R 17365818 17365855 -10539198 + AT_rich Low_complexity Low_complexity 1 37 0 5 717 229 204 0 0 chr3R 17366400 17366444 -10538609 + A-rich Low_complexity Low_complexity 2 45 0 5 717 25 31 0 0 chr3R 17367780 17367812 -10537241 + AT_rich Low_complexity Low_complexity 1 32 0 5 717 21 0 0 0 chr3R 17373019 17373040 -10532013 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 238 191 0 0 chr3R 17377313 17377360 -10527693 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 717 194 136 23 0 chr3R 17377398 17377442 -10527611 + GA-rich Low_complexity Low_complexity 1 45 0 5 717 246 32 0 0 chr3R 17378229 17378260 -10526793 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 717 24 53 0 0 chr3R 17380851 17380889 -10524164 + AT_rich Low_complexity Low_complexity 1 38 0 5 717 202 298 0 0 chr3R 17381880 17381974 -10523079 + (ATG)n Simple_repeat Simple_repeat 1 94 0 5 717 216 86 0 0 chr3R 17382911 17382946 -10522107 + (CTG)n Simple_repeat Simple_repeat 1 35 0 5 717 290 159 14 0 chr3R 17382944 17383013 -10522040 + (TGG)n Simple_repeat Simple_repeat 1 70 0 5 717 249 33 0 0 chr3R 17383205 17383235 -10521818 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 5 717 235 218 0 0 chr3R 17383298 17383353 -10521700 + (CAGC)n Simple_repeat Simple_repeat 3 57 0 5 717 240 172 0 0 chr3R 17384807 17384865 -10520188 + CT-rich Low_complexity Low_complexity 1 58 0 5 717 233 196 39 0 chr3R 17386092 17386143 -10518910 - DNAREP1_DM LINE Penelope -535 59 7 5 717 213 39 0 0 chr3R 17387364 17387390 -10517663 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 717 216 209 0 0 chr3R 17387802 17387845 -10517208 + (TTG)n Simple_repeat Simple_repeat 3 45 0 5 717 48 81 0 0 chr3R 17388121 17388232 -10516821 + AT_rich Low_complexity Low_complexity 1 111 0 5 717 23 78 0 0 chr3R 17390317 17390368 -10514685 + AT_rich Low_complexity Low_complexity 1 51 0 5 717 26 50 0 0 chr3R 17393738 17393778 -10511275 + AT_rich Low_complexity Low_complexity 1 40 0 5 717 49 43 0 0 chr3R 17395738 17395808 -10509245 + AT_rich Low_complexity Low_complexity 1 70 0 5 717 236 200 0 14 chr3R 17396520 17396591 -10508462 + (TG)n Simple_repeat Simple_repeat 2 71 0 5 717 194 61 60 20 chr3R 17396651 17396701 -10508352 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 5 717 219 36 0 0 chr3R 17396971 17396999 -10508054 + (CTTTG)n Simple_repeat Simple_repeat 2 29 0 5 717 21 0 0 0 chr3R 17397031 17397052 -10508001 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 273 241 0 44 chr3R 17398373 17398464 -10506589 + T-rich Low_complexity Low_complexity 3 89 0 5 717 234 233 0 0 chr3R 17399362 17399422 -10505631 + (TCG)n Simple_repeat Simple_repeat 1 60 0 5 717 23 0 0 0 chr3R 17402737 17402760 -10502293 + AT_rich Low_complexity Low_complexity 1 23 0 5 717 300 138 0 0 chr3R 17405610 17405675 -10499378 + (ATG)n Simple_repeat Simple_repeat 1 65 0 5 717 38 39 0 0 chr3R 17406906 17406958 -10498095 + AT_rich Low_complexity Low_complexity 1 52 0 5 717 255 79 0 0 chr3R 17407690 17407728 -10497325 + (A)n Simple_repeat Simple_repeat 1 38 0 5 717 23 0 0 0 chr3R 17408358 17408381 -10496672 + AT_rich Low_complexity Low_complexity 1 23 0 5 717 192 97 0 0 chr3R 17409553 17409584 -10495469 + (GAA)n Simple_repeat Simple_repeat 2 32 0 5 717 254 50 25 0 chr3R 17411748 17411788 -10493265 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 5 717 35 24 0 0 chr3R 17412579 17412621 -10492432 + AT_rich Low_complexity Low_complexity 1 42 0 5 717 21 89 0 0 chr3R 17414751 17414807 -10490246 + AT_rich Low_complexity Low_complexity 1 56 0 5 717 350 57 19 0 chr3R 17415579 17415632 -10489421 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 717 264 111 0 0 chr3R 17415911 17415956 -10489097 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 5 717 23 0 0 0 chr3R 17419332 17419355 -10485698 + AT_rich Low_complexity Low_complexity 1 23 0 5 717 186 167 0 0 chr3R 17419987 17420023 -10485030 + (CGGA)n Simple_repeat Simple_repeat 2 37 0 5 717 28 0 0 0 chr3R 17420195 17420223 -10484830 + AT_rich Low_complexity Low_complexity 1 28 0 5 717 209 83 28 0 chr3R 17422929 17422965 -10482088 + (CAT)n Simple_repeat Simple_repeat 2 38 0 5 717 213 94 0 0 chr3R 17424462 17424494 -10480559 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 717 272 154 31 0 chr3R 17426523 17426588 -10478465 + (GCTG)n Simple_repeat Simple_repeat 1 67 0 5 717 21 0 0 0 chr3R 17427047 17427068 -10477985 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 24 100 0 0 chr3R 17430181 17430261 -10474792 + AT_rich Low_complexity Low_complexity 1 80 0 5 717 28 29 0 0 chr3R 17430699 17430734 -10474319 + AT_rich Low_complexity Low_complexity 1 35 0 5 717 207 152 0 42 chr3R 17431108 17431156 -10473897 + A-rich Low_complexity Low_complexity 2 47 0 5 717 192 77 0 0 chr3R 17431358 17431384 -10473669 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 717 25 31 0 0 chr3R 17431928 17431960 -10473093 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 261 262 0 24 chr3R 17432708 17432790 -10472263 + GA-rich Low_complexity Low_complexity 5 84 0 5 718 7289 82 595 5 chr3R 17434785 17437357 -10467696 - FB4_DM DNA Tc1 0 4089 1 5 718 180 97 0 0 chr3R 17440295 17440326 -10464727 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 718 230 56 28 0 chr3R 17440437 17440473 -10464580 + (CCA)n Simple_repeat Simple_repeat 2 38 0 5 718 201 132 0 0 chr3R 17441186 17441224 -10463829 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 5 718 214 254 17 0 chr3R 17441874 17441933 -10463120 + (CAG)n Simple_repeat Simple_repeat 1 60 0 5 718 21 0 0 0 chr3R 17442409 17442430 -10462623 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 225 180 0 0 chr3R 17442575 17442625 -10462428 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 718 25 31 0 0 chr3R 17443642 17443674 -10461379 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 32 43 0 0 chr3R 17443799 17443845 -10461208 + AT_rich Low_complexity Low_complexity 1 46 0 5 718 186 103 0 0 chr3R 17444158 17444187 -10460866 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 718 21 36 0 0 chr3R 17445322 17445350 -10459703 + AT_rich Low_complexity Low_complexity 1 28 0 5 718 36 0 0 0 chr3R 17445843 17445879 -10459174 + AT_rich Low_complexity Low_complexity 1 36 0 5 718 22 35 0 0 chr3R 17446028 17446057 -10458996 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 24 0 0 0 chr3R 17446461 17446485 -10458568 + AT_rich Low_complexity Low_complexity 1 24 0 5 718 23 0 0 0 chr3R 17446697 17446720 -10458333 + AT_rich Low_complexity Low_complexity 1 23 0 5 718 198 0 0 0 chr3R 17446720 17446742 -10458311 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 718 21 0 0 0 chr3R 17447190 17447211 -10457842 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 198 0 0 0 chr3R 17447239 17447261 -10457792 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 718 26 64 0 0 chr3R 17448117 17448164 -10456889 + AT_rich Low_complexity Low_complexity 1 47 0 5 718 207 162 0 0 chr3R 17448699 17448736 -10456317 + (CCG)n Simple_repeat Simple_repeat 1 37 0 5 718 303 290 0 11 chr3R 17448919 17449013 -10456040 + (TTG)n Simple_repeat Simple_repeat 1 93 0 5 718 244 152 51 0 chr3R 17449211 17449270 -10455783 - ROO_I LTR Pao -7555 701 640 5 718 237 123 29 44 chr3R 17449861 17449929 -10455124 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 5 718 183 42 0 0 chr3R 17450142 17450166 -10454887 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 5 718 193 226 0 23 chr3R 17451791 17451877 -10453176 + (CTG)n Simple_repeat Simple_repeat 3 86 0 5 718 280 247 0 13 chr3R 17452112 17452190 -10452863 + (CTG)n Simple_repeat Simple_repeat 1 77 0 5 718 234 45 44 22 chr3R 17452270 17452315 -10452738 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 718 217 348 0 0 chr3R 17456133 17456222 -10448831 + (CA)n Simple_repeat Simple_repeat 1 89 0 5 718 239 176 0 19 chr3R 17458487 17458539 -10446514 + GA-rich Low_complexity Low_complexity 1 51 0 5 718 201 139 0 0 chr3R 17460477 17460520 -10444533 + (GAA)n Simple_repeat Simple_repeat 2 44 0 5 718 224 229 16 0 chr3R 17460817 17460878 -10444175 + T-rich Low_complexity Low_complexity 2 63 0 5 718 34 24 0 0 chr3R 17464973 17465014 -10440039 + AT_rich Low_complexity Low_complexity 1 41 0 5 718 25 0 0 0 chr3R 17468501 17468526 -10436527 + AT_rich Low_complexity Low_complexity 1 25 0 5 718 21 0 0 0 chr3R 17469595 17469616 -10435437 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 21 0 0 0 chr3R 17473558 17473579 -10431474 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 27 81 0 0 chr3R 17475226 17475288 -10429765 + AT_rich Low_complexity Low_complexity 1 62 0 5 718 30 89 0 0 chr3R 17475365 17475444 -10429609 + AT_rich Low_complexity Low_complexity 1 79 0 5 718 213 209 0 0 chr3R 17477501 17477544 -10427509 + GA-rich Low_complexity Low_complexity 2 44 0 5 718 25 31 0 0 chr3R 17482153 17482185 -10422868 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 29 0 0 0 chr3R 17482775 17482804 -10422249 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 350 85 0 0 chr3R 17484894 17484941 -10420112 - DNAREP1_DM LINE Penelope 0 594 548 5 718 345 159 34 79 chr3R 17484956 17485045 -10420008 - DNAREP1_DM LINE Penelope -509 85 1 5 718 210 147 0 0 chr3R 17485872 17485906 -10419147 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 718 22 35 0 0 chr3R 17488252 17488281 -10416772 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 25 31 0 0 chr3R 17489784 17489816 -10415237 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 221 200 36 0 chr3R 17498183 17498238 -10406815 + (CATA)n Simple_repeat Simple_repeat 3 59 0 5 718 23 0 0 0 chr3R 17501355 17501378 -10403675 + AT_rich Low_complexity Low_complexity 1 23 0 5 718 24 77 0 0 chr3R 17502657 17502709 -10402344 + AT_rich Low_complexity Low_complexity 1 52 0 5 718 214 255 0 18 chr3R 17504242 17504298 -10400755 + (TTCTG)n Simple_repeat Simple_repeat 1 55 0 5 718 290 265 0 12 chr3R 17510654 17510738 -10394315 + CT-rich Low_complexity Low_complexity 1 83 0 5 718 22 0 0 0 chr3R 17511095 17511117 -10393936 + AT_rich Low_complexity Low_complexity 1 22 0 5 718 21 0 0 0 chr3R 17511123 17511144 -10393909 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 249 33 0 0 chr3R 17516519 17516549 -10388504 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 718 209 320 0 26 chr3R 17517270 17517347 -10387706 + (CCCCAA)n Simple_repeat Simple_repeat 2 76 0 5 718 22 56 0 0 chr3R 17519628 17519664 -10385389 + AT_rich Low_complexity Low_complexity 1 36 0 5 718 228 277 15 0 chr3R 17520380 17520445 -10384608 + (CGGAG)n Simple_repeat Simple_repeat 2 67 0 5 718 207 211 19 0 chr3R 17520640 17520692 -10384361 + (TTG)n Simple_repeat Simple_repeat 3 55 0 5 718 35 83 0 0 chr3R 17521156 17521240 -10383813 + AT_rich Low_complexity Low_complexity 1 84 0 5 718 22 35 0 0 chr3R 17521633 17521662 -10383391 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 22 0 0 0 chr3R 17522544 17522566 -10382487 + AT_rich Low_complexity Low_complexity 1 22 0 5 718 29 0 0 0 chr3R 17524835 17524864 -10380189 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 203 152 0 0 chr3R 17527773 17527806 -10377247 + CT-rich Low_complexity Low_complexity 2 34 0 5 718 22 0 0 0 chr3R 17528233 17528255 -10376798 + AT_rich Low_complexity Low_complexity 1 22 0 5 718 29 28 0 0 chr3R 17529228 17529264 -10375789 + AT_rich Low_complexity Low_complexity 1 36 0 5 718 34 0 0 0 chr3R 17531914 17531948 -10373105 + AT_rich Low_complexity Low_complexity 1 34 0 5 718 21 0 0 0 chr3R 17536226 17536247 -10368806 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 21 36 0 0 chr3R 17539368 17539396 -10365657 + AT_rich Low_complexity Low_complexity 1 28 0 5 718 229 208 0 19 chr3R 17543535 17543589 -10361464 + CT-rich Low_complexity Low_complexity 2 54 0 5 718 24 0 0 0 chr3R 17546174 17546198 -10358855 + AT_rich Low_complexity Low_complexity 1 24 0 5 718 200 186 14 54 chr3R 17548947 17549021 -10356032 + (TTA)n Simple_repeat Simple_repeat 3 73 0 5 718 195 42 0 0 chr3R 17549675 17549699 -10355354 + (A)n Simple_repeat Simple_repeat 1 24 0 5 718 626 111 529 0 chr3R 17550290 17550460 -10354593 + DMRP1 Unknown Unknown 39 298 -48 5 718 238 200 0 0 chr3R 17551452 17551507 -10353546 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 718 28 48 0 0 chr3R 17553658 17553700 -10351353 + AT_rich Low_complexity Low_complexity 1 42 0 5 718 21 36 0 0 chr3R 17555460 17555488 -10349565 + AT_rich Low_complexity Low_complexity 1 28 0 5 718 29 28 0 0 chr3R 17562664 17562700 -10342353 + AT_rich Low_complexity Low_complexity 1 36 0 5 719 29 28 0 0 chr3R 17565029 17565065 -10339988 + AT_rich Low_complexity Low_complexity 1 36 0 5 719 23 0 0 0 chr3R 17574344 17574367 -10330686 + AT_rich Low_complexity Low_complexity 1 23 0 5 719 24 0 0 0 chr3R 17585129 17585153 -10319900 + AT_rich Low_complexity Low_complexity 1 24 0 5 719 3105 25 0 0 chr3R 17586898 17587254 -10317799 - MDG1_LTR LTR Gypsy 0 442 87 5 719 423 100 0 0 chr3R 17587254 17587324 -10317729 + (TTA)n Simple_repeat Simple_repeat 3 72 0 5 719 56687 7 24 1 chr3R 17587328 17593791 -10311262 - MDG1_I LTR Gypsy -98 6799 1 5 719 3105 25 0 0 chr3R 17593791 17594147 -10310906 - MDG1_LTR LTR Gypsy 0 442 87 5 719 423 100 0 0 chr3R 17594147 17594217 -10310836 + (TTA)n Simple_repeat Simple_repeat 3 72 0 5 719 337 167 0 81 chr3R 17597218 17597329 -10307724 - ROO_I LTR Pao -7515 741 640 5 719 192 40 0 0 chr3R 17606256 17606281 -10298772 + (T)n Simple_repeat Simple_repeat 1 25 0 5 719 214 279 0 0 chr3R 17608712 17608773 -10296280 + A-rich Low_complexity Low_complexity 2 62 0 5 719 21 0 0 0 chr3R 17609315 17609336 -10295717 + AT_rich Low_complexity Low_complexity 1 21 0 5 719 206 246 29 0 chr3R 17609530 17609599 -10295454 + (CAT)n Simple_repeat Simple_repeat 2 72 0 5 719 222 91 0 0 chr3R 17610060 17610093 -10294960 + (CATCT)n Simple_repeat Simple_repeat 2 34 0 5 719 210 37 0 0 chr3R 17610942 17610969 -10294084 + (CAATT)n Simple_repeat Simple_repeat 2 28 0 5 719 228 344 0 8 chr3R 17619660 17619786 -10285267 + (CA)n Simple_repeat Simple_repeat 1 125 0 5 719 205 167 0 0 chr3R 17619923 17619959 -10285094 + CT-rich Low_complexity Low_complexity 1 36 0 5 719 210 37 0 0 chr3R 17623526 17623553 -10281500 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 719 219 125 0 0 chr3R 17623874 17623914 -10281139 + (CGATG)n Simple_repeat Simple_repeat 3 42 0 5 719 180 273 0 0 chr3R 17624167 17624244 -10280809 + (ATG)n Simple_repeat Simple_repeat 1 77 0 5 719 279 114 0 0 chr3R 17624399 17624443 -10280610 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 719 22 0 0 0 chr3R 17626271 17626293 -10278760 + AT_rich Low_complexity Low_complexity 1 22 0 5 719 214 304 0 0 chr3R 17626452 17626521 -10278532 + (CAGT)n Simple_repeat Simple_repeat 4 72 0 5 719 240 224 0 0 chr3R 17629670 17629719 -10275334 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 719 22 35 0 0 chr3R 17631097 17631126 -10273927 + AT_rich Low_complexity Low_complexity 1 29 0 5 719 21 36 0 0 chr3R 17631568 17631596 -10273457 + AT_rich Low_complexity Low_complexity 1 28 0 5 719 182 91 30 0 chr3R 17632426 17632459 -10272594 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 719 284 138 0 15 chr3R 17634267 17634333 -10270720 + (CTG)n Simple_repeat Simple_repeat 1 65 0 5 719 259 74 0 53 chr3R 17635192 17635249 -10269804 + (CAT)n Simple_repeat Simple_repeat 3 56 0 5 719 201 39 0 0 chr3R 17635249 17635275 -10269778 + (CAG)n Simple_repeat Simple_repeat 3 28 0 5 719 189 0 0 0 chr3R 17635578 17635599 -10269454 + (T)n Simple_repeat Simple_repeat 1 21 0 5 719 180 0 0 0 chr3R 17637730 17637750 -10267303 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 719 222 156 0 0 chr3R 17638770 17638815 -10266238 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 719 243 0 0 0 chr3R 17639193 17639220 -10265833 + (T)n Simple_repeat Simple_repeat 1 27 0 5 719 246 143 0 0 chr3R 17639592 17639641 -10265412 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 719 234 174 0 0 chr3R 17640845 17640891 -10264162 + (CGGA)n Simple_repeat Simple_repeat 3 48 0 5 719 207 254 15 0 chr3R 17642113 17642180 -10262873 + (CTG)n Simple_repeat Simple_repeat 1 68 0 5 719 21 36 0 0 chr3R 17642426 17642454 -10262599 + AT_rich Low_complexity Low_complexity 1 28 0 5 719 27 0 0 0 chr3R 17644504 17644531 -10260522 + AT_rich Low_complexity Low_complexity 1 27 0 5 719 227 268 0 44 chr3R 17646639 17646729 -10258324 - ROO_I LTR Pao -7514 742 657 5 719 214 241 0 0 chr3R 17647502 17647556 -10257497 + GA-rich Low_complexity Low_complexity 1 54 0 5 719 251 71 24 0 chr3R 17648119 17648161 -10256892 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 719 24 32 0 0 chr3R 17648504 17648535 -10256518 + AT_rich Low_complexity Low_complexity 1 31 0 5 719 32 26 0 0 chr3R 17649904 17649943 -10255110 + AT_rich Low_complexity Low_complexity 1 39 0 5 719 25 65 0 0 chr3R 17650049 17650095 -10254958 + AT_rich Low_complexity Low_complexity 1 46 0 5 719 27 0 0 0 chr3R 17650106 17650133 -10254920 + AT_rich Low_complexity Low_complexity 1 27 0 5 719 209 194 0 0 chr3R 17651644 17651680 -10253373 + (CAG)n Simple_repeat Simple_repeat 3 38 0 5 719 231 88 0 0 chr3R 17651725 17651759 -10253294 + (GAA)n Simple_repeat Simple_repeat 2 35 0 5 719 22 0 0 0 chr3R 17652109 17652131 -10252922 + AT_rich Low_complexity Low_complexity 1 22 0 5 719 225 279 0 16 chr3R 17655499 17655561 -10249492 + (CAA)n Simple_repeat Simple_repeat 3 63 0 5 719 37 0 0 0 chr3R 17656138 17656175 -10248878 + AT_rich Low_complexity Low_complexity 1 37 0 5 719 24 0 0 0 chr3R 17661721 17661745 -10243308 + AT_rich Low_complexity Low_complexity 1 24 0 5 719 270 0 0 0 chr3R 17661870 17661900 -10243153 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 719 372 120 29 20 chr3R 17663200 17663302 -10241751 + ROO_I LTR Pao 641 743 -7513 5 719 274 172 0 0 chr3R 17663482 17663546 -10241507 - ROO_I LTR Pao -7540 716 653 5 719 304 241 0 33 chr3R 17665166 17665256 -10239797 + (CCCCAA)n Simple_repeat Simple_repeat 1 87 0 5 719 38 22 0 0 chr3R 17665549 17665594 -10239459 + AT_rich Low_complexity Low_complexity 1 45 0 5 719 25 51 0 0 chr3R 17665646 17665685 -10239368 + AT_rich Low_complexity Low_complexity 1 39 0 5 719 21 0 0 0 chr3R 17666913 17666934 -10238119 + AT_rich Low_complexity Low_complexity 1 21 0 5 719 222 159 0 22 chr3R 17667673 17667718 -10237335 + T-rich Low_complexity Low_complexity 3 46 0 5 719 54 0 0 0 chr3R 17672679 17672733 -10232320 + AT_rich Low_complexity Low_complexity 1 54 0 5 719 207 69 0 0 chr3R 17673485 17673514 -10231539 + (T)n Simple_repeat Simple_repeat 1 29 0 5 719 228 244 0 0 chr3R 17674255 17674300 -10230753 + (CATA)n Simple_repeat Simple_repeat 1 45 0 5 719 186 43 0 0 chr3R 17675108 17675131 -10229922 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 719 221 164 0 52 chr3R 17676364 17676422 -10228631 + T-rich Low_complexity Low_complexity 2 56 0 5 719 196 200 24 0 chr3R 17676726 17676811 -10228242 + (TG)n Simple_repeat Simple_repeat 1 87 0 5 719 33 73 0 0 chr3R 17676821 17676889 -10228164 + AT_rich Low_complexity Low_complexity 1 68 0 5 719 26 50 0 0 chr3R 17677098 17677138 -10227915 + AT_rich Low_complexity Low_complexity 1 40 0 5 719 25 83 0 0 chr3R 17677320 17677380 -10227673 + AT_rich Low_complexity Low_complexity 1 60 0 5 719 300 111 0 0 chr3R 17677493 17677538 -10227515 + (TTG)n Simple_repeat Simple_repeat 3 47 0 5 719 216 0 0 0 chr3R 17679621 17679645 -10225408 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 719 23 33 0 0 chr3R 17679842 17679872 -10225181 + AT_rich Low_complexity Low_complexity 1 30 0 5 719 240 130 0 0 chr3R 17683681 17683727 -10221326 + (GGATG)n Simple_repeat Simple_repeat 5 50 0 5 719 183 139 0 0 chr3R 17685006 17685042 -10220011 + (T)n Simple_repeat Simple_repeat 1 36 0 5 719 213 132 0 86 chr3R 17685821 17685879 -10219174 + T-rich Low_complexity Low_complexity 2 54 0 5 719 26 50 0 0 chr3R 17686245 17686285 -10218768 + AT_rich Low_complexity Low_complexity 1 40 0 5 719 206 68 43 43 chr3R 17689938 17689984 -10215069 + (TATAA)n Simple_repeat Simple_repeat 1 46 0 5 720 183 80 0 0 chr3R 17698252 17698277 -10206776 + (TTA)n Simple_repeat Simple_repeat 2 26 0 5 720 22 0 0 0 chr3R 17699331 17699353 -10205700 + AT_rich Low_complexity Low_complexity 1 22 0 5 720 30 0 0 0 chr3R 17700622 17700652 -10204401 + AT_rich Low_complexity Low_complexity 1 30 0 5 720 26 30 0 0 chr3R 17702007 17702040 -10203013 + AT_rich Low_complexity Low_complexity 1 33 0 5 720 31 44 0 0 chr3R 17709631 17709676 -10195377 + AT_rich Low_complexity Low_complexity 1 45 0 5 720 25 31 0 0 chr3R 17710443 17710475 -10194578 + AT_rich Low_complexity Low_complexity 1 32 0 5 720 408 111 0 0 chr3R 17715903 17715966 -10189087 + (ACTG)n Simple_repeat Simple_repeat 1 63 0 5 720 183 42 0 0 chr3R 17716681 17716705 -10188348 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 720 26 64 0 0 chr3R 17717354 17717401 -10187652 + AT_rich Low_complexity Low_complexity 1 47 0 5 720 21 36 0 0 chr3R 17719885 17719913 -10185140 + AT_rich Low_complexity Low_complexity 1 28 0 5 720 237 163 0 0 chr3R 17720048 17720097 -10184956 + (TGG)n Simple_repeat Simple_repeat 3 51 0 5 720 22 0 0 0 chr3R 17721301 17721323 -10183730 + AT_rich Low_complexity Low_complexity 1 22 0 5 720 33 56 0 0 chr3R 17721654 17721708 -10183345 + AT_rich Low_complexity Low_complexity 1 54 0 5 720 206 137 19 38 chr3R 17721978 17722031 -10183022 + T-rich Low_complexity Low_complexity 6 57 0 5 720 258 148 0 0 chr3R 17722058 17722112 -10182941 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 720 21 0 0 0 chr3R 17723499 17723520 -10181533 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 357 174 0 0 chr3R 17723767 17723836 -10181217 + (GTATG)n Simple_repeat Simple_repeat 4 72 0 5 720 201 263 0 0 chr3R 17724008 17724065 -10180988 + T-rich Low_complexity Low_complexity 1 57 0 5 720 186 233 0 0 chr3R 17724725 17724785 -10180268 + (TTG)n Simple_repeat Simple_repeat 1 60 0 5 720 186 103 0 0 chr3R 17725280 17725309 -10179744 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 720 22 35 0 0 chr3R 17727444 17727473 -10177580 + AT_rich Low_complexity Low_complexity 1 29 0 5 720 183 114 0 0 chr3R 17729887 17729922 -10175131 + (CAT)n Simple_repeat Simple_repeat 1 35 0 5 720 236 250 0 0 chr3R 17731246 17731298 -10173755 + (CAG)n Simple_repeat Simple_repeat 1 52 0 5 720 23 33 0 0 chr3R 17731601 17731631 -10173422 + AT_rich Low_complexity Low_complexity 1 30 0 5 720 205 191 0 0 chr3R 17732442 17732484 -10172569 + T-rich Low_complexity Low_complexity 5 46 0 5 720 22 35 0 0 chr3R 17732833 17732862 -10172191 + AT_rich Low_complexity Low_complexity 1 29 0 5 720 198 0 0 0 chr3R 17733256 17733278 -10171775 + (CACAA)n Simple_repeat Simple_repeat 1 22 0 5 720 24 0 0 0 chr3R 17733920 17733944 -10171109 + AT_rich Low_complexity Low_complexity 1 24 0 5 720 33 25 0 0 chr3R 17734073 17734113 -10170940 + AT_rich Low_complexity Low_complexity 1 40 0 5 720 23 0 0 0 chr3R 17734606 17734629 -10170424 + AT_rich Low_complexity Low_complexity 1 23 0 5 720 294 164 0 0 chr3R 17734686 17734741 -10170312 + (TTCGG)n Simple_repeat Simple_repeat 1 55 0 5 720 23 68 0 0 chr3R 17735291 17735335 -10169718 + AT_rich Low_complexity Low_complexity 1 44 0 5 720 30 0 0 0 chr3R 17741231 17741261 -10163792 + AT_rich Low_complexity Low_complexity 1 30 0 5 720 25 31 0 0 chr3R 17741977 17742009 -10163044 + AT_rich Low_complexity Low_complexity 1 32 0 5 720 201 39 0 0 chr3R 17742800 17742826 -10162227 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 720 219 152 0 0 chr3R 17743916 17743962 -10161091 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 720 219 260 0 38 chr3R 17744955 17745035 -10160018 + T-rich Low_complexity Low_complexity 5 81 0 5 720 243 0 0 0 chr3R 17749264 17749291 -10155762 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 720 188 35 35 0 chr3R 17751144 17751173 -10153880 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 720 180 0 0 0 chr3R 17752673 17752693 -10152360 + (T)n Simple_repeat Simple_repeat 1 20 0 5 720 195 69 0 0 chr3R 17753638 17753667 -10151386 + (T)n Simple_repeat Simple_repeat 1 29 0 5 720 48 0 0 0 chr3R 17757313 17757361 -10147692 + AT_rich Low_complexity Low_complexity 1 48 0 5 720 25 0 0 0 chr3R 17757793 17757818 -10147235 + AT_rich Low_complexity Low_complexity 1 25 0 5 720 205 186 23 0 chr3R 17758397 17758440 -10146613 + (CTG)n Simple_repeat Simple_repeat 2 45 0 5 720 180 0 0 0 chr3R 17758534 17758554 -10146499 + (CAGAC)n Simple_repeat Simple_repeat 4 23 0 5 720 21 0 0 0 chr3R 17758910 17758931 -10146122 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 242 224 0 0 chr3R 17759756 17759814 -10145239 + T-rich Low_complexity Low_complexity 1 58 0 5 720 240 167 0 0 chr3R 17760007 17760055 -10144998 + (CAG)n Simple_repeat Simple_repeat 3 50 0 5 720 207 69 0 0 chr3R 17761842 17761871 -10143182 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 720 252 0 0 0 chr3R 17762448 17762476 -10142577 + (CTG)n Simple_repeat Simple_repeat 1 28 0 5 720 230 195 0 163 chr3R 17763205 17763303 -10141750 - ROO_I LTR Pao -7523 733 652 5 720 227 238 0 31 chr3R 17763311 17763376 -10141677 + (ATG)n Simple_repeat Simple_repeat 1 63 0 5 720 209 312 14 21 chr3R 17764199 17764343 -10140710 + T-rich Low_complexity Low_complexity 6 148 0 5 720 262 250 0 0 chr3R 17765220 17765280 -10139773 + (CAG)n Simple_repeat Simple_repeat 2 61 0 5 720 213 330 0 0 chr3R 17766747 17766838 -10138215 + (CAGT)n Simple_repeat Simple_repeat 1 91 0 5 720 249 83 0 0 chr3R 17766973 17767009 -10138044 + (TACGG)n Simple_repeat Simple_repeat 4 39 0 5 720 180 77 0 0 chr3R 17767010 17767036 -10138017 + (ACCG)n Simple_repeat Simple_repeat 4 29 0 5 720 205 250 0 0 chr3R 17767068 17767112 -10137941 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 720 271 65 21 21 chr3R 17767743 17767790 -10137263 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 720 192 77 0 0 chr3R 17768688 17768714 -10136339 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 720 183 42 0 0 chr3R 17768928 17768952 -10136101 + (CAA)n Simple_repeat Simple_repeat 3 26 0 5 720 321 68 0 0 chr3R 17769911 17769955 -10135098 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 720 291 104 0 0 chr3R 17770145 17770193 -10134860 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 720 33 25 0 0 chr3R 17770247 17770287 -10134766 + AT_rich Low_complexity Low_complexity 1 40 0 5 720 29 47 0 0 chr3R 17771107 17771150 -10133903 + AT_rich Low_complexity Low_complexity 1 43 0 5 720 201 162 0 0 chr3R 17773195 17773232 -10131821 + A-rich Low_complexity Low_complexity 2 38 0 5 720 218 154 18 55 chr3R 17773921 17773976 -10131077 + A-rich Low_complexity Low_complexity 2 54 0 5 720 279 104 0 0 chr3R 17774364 17774412 -10130641 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 720 207 255 0 0 chr3R 17774633 17774684 -10130369 + CT-rich Low_complexity Low_complexity 3 53 0 5 720 306 132 0 0 chr3R 17775208 17775261 -10129792 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 720 25 51 0 0 chr3R 17776597 17776636 -10128417 + AT_rich Low_complexity Low_complexity 1 39 0 5 720 186 167 0 0 chr3R 17777454 17777490 -10127563 + (CAA)n Simple_repeat Simple_repeat 1 36 0 5 720 21 0 0 0 chr3R 17778831 17778852 -10126201 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 204 40 0 0 chr3R 17780110 17780135 -10124918 + (CTG)n Simple_repeat Simple_repeat 2 26 0 5 720 287 209 0 32 chr3R 17781338 17781432 -10123621 - ROO_I LTR Pao -7523 733 643 5 720 273 29 0 0 chr3R 17781880 17781914 -10123139 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 720 21 36 0 0 chr3R 17782240 17782268 -10122785 + AT_rich Low_complexity Low_complexity 1 28 0 5 720 207 211 0 19 chr3R 17783619 17783672 -10121381 + (CAATC)n Simple_repeat Simple_repeat 3 54 0 5 720 231 125 0 0 chr3R 17783723 17783763 -10121290 + (CAGAA)n Simple_repeat Simple_repeat 2 41 0 5 720 288 120 0 0 chr3R 17784027 17784077 -10120976 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 720 64 26 0 0 chr3R 17785784 17785862 -10119191 + AT_rich Low_complexity Low_complexity 1 78 0 5 720 192 40 0 0 chr3R 17787499 17787524 -10117529 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 720 195 129 0 0 chr3R 17789485 17789516 -10115537 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 720 189 121 0 0 chr3R 17790278 17790311 -10114742 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 720 189 0 0 0 chr3R 17791385 17791406 -10113647 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 720 267 93 0 0 chr3R 17791799 17791842 -10113211 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 720 192 40 0 0 chr3R 17792377 17792402 -10112651 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 720 37 39 0 0 chr3R 17792892 17792943 -10112110 + AT_rich Low_complexity Low_complexity 1 51 0 5 720 23 86 0 0 chr3R 17792992 17793050 -10112003 + AT_rich Low_complexity Low_complexity 1 58 0 5 720 257 153 58 12 chr3R 17796152 17796238 -10108815 + (TTATA)n Simple_repeat Simple_repeat 1 90 0 5 720 28 71 0 0 chr3R 17796268 17796324 -10108729 + AT_rich Low_complexity Low_complexity 1 56 0 5 720 21 0 0 0 chr3R 17798635 17798656 -10106397 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 286 288 0 0 chr3R 17798947 17799020 -10106033 + (CCG)n Simple_repeat Simple_repeat 2 74 0 5 720 213 159 0 0 chr3R 17799153 17799197 -10105856 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 720 192 40 0 0 chr3R 17800453 17800478 -10104575 + (T)n Simple_repeat Simple_repeat 1 25 0 5 720 23 54 0 0 chr3R 17800502 17800539 -10104514 + AT_rich Low_complexity Low_complexity 1 37 0 5 720 26 0 0 0 chr3R 17801159 17801185 -10103868 + AT_rich Low_complexity Low_complexity 1 26 0 5 720 207 0 0 0 chr3R 17801399 17801422 -10103631 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 720 277 97 16 31 chr3R 17801637 17801701 -10103352 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 720 22 35 0 0 chr3R 17803275 17803304 -10101749 + AT_rich Low_complexity Low_complexity 1 29 0 5 720 300 102 0 0 chr3R 17804686 17804735 -10100318 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 720 180 0 0 0 chr3R 17804853 17804873 -10100180 + (TCG)n Simple_repeat Simple_repeat 2 21 0 5 720 221 163 23 0 chr3R 17805087 17805130 -10099923 + (CTG)n Simple_repeat Simple_repeat 2 45 0 5 720 320 147 0 13 chr3R 17805994 17806070 -10098983 + (ACTG)n Simple_repeat Simple_repeat 4 78 0 5 720 192 25 23 70 chr3R 17806601 17806644 -10098409 + (CAAAAA)n Simple_repeat Simple_repeat 4 44 0 5 720 224 241 0 0 chr3R 17808432 17808486 -10096567 + T-rich Low_complexity Low_complexity 1 54 0 5 720 183 42 0 0 chr3R 17808913 17808937 -10096116 + (T)n Simple_repeat Simple_repeat 1 24 0 5 720 225 65 0 0 chr3R 17810795 17810826 -10094227 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 720 207 69 0 0 chr3R 17811719 17811748 -10093305 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 720 23 54 0 0 chr3R 17813418 17813455 -10091598 + AT_rich Low_complexity Low_complexity 1 37 0 5 720 206 280 0 0 chr3R 17813652 17813702 -10091351 + (CTG)n Simple_repeat Simple_repeat 1 50 0 5 720 244 294 19 10 chr3R 17814225 17814328 -10090725 + (CTG)n Simple_repeat Simple_repeat 2 105 0 5 720 26 0 0 0 chr3R 17814954 17814980 -10090073 + AT_rich Low_complexity Low_complexity 1 26 0 5 720 24 32 0 0 chr3R 17815096 17815127 -10089926 + AT_rich Low_complexity Low_complexity 1 31 0 5 720 339 96 0 0 chr3R 17816013 17816065 -10088988 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 720 207 0 0 0 chr3R 17820145 17820168 -10084885 + (CAG)n Simple_repeat Simple_repeat 2 24 0 5 720 24 0 0 0 chr3R 17821925 17821949 -10083104 + AT_rich Low_complexity Low_complexity 1 24 0 5 720 231 167 0 0 chr3R 17822095 17822137 -10082916 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 720 201 74 0 0 chr3R 17822324 17822351 -10082702 + (CAG)n Simple_repeat Simple_repeat 1 27 0 5 720 216 0 0 0 chr3R 17822789 17822813 -10082240 + (ATATG)n Simple_repeat Simple_repeat 2 25 0 5 720 21 36 0 0 chr3R 17824111 17824139 -10080914 + AT_rich Low_complexity Low_complexity 1 28 0 5 720 206 30 0 83 chr3R 17824590 17824626 -10080427 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 721 198 71 0 0 chr3R 17825984 17826012 -10079041 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 721 25 0 0 0 chr3R 17826527 17826552 -10078501 + AT_rich Low_complexity Low_complexity 1 25 0 5 721 219 310 0 14 chr3R 17827358 17827430 -10077623 + (CGG)n Simple_repeat Simple_repeat 3 73 0 5 721 200 238 0 0 chr3R 17827607 17827649 -10077404 + T-rich Low_complexity Low_complexity 1 42 0 5 721 30 27 0 0 chr3R 17828367 17828404 -10076649 + AT_rich Low_complexity Low_complexity 1 37 0 5 721 50 51 0 0 chr3R 17828439 17828517 -10076536 + AT_rich Low_complexity Low_complexity 1 78 0 5 721 22 0 0 0 chr3R 17828552 17828574 -10076479 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 253 214 9 75 chr3R 17830261 17830367 -10074686 + ROO_I LTR Pao 636 734 -7522 5 721 210 192 0 0 chr3R 17830549 17830601 -10074452 + (CAA)n Simple_repeat Simple_repeat 2 53 0 5 721 234 128 0 0 chr3R 17831310 17831349 -10073704 + (CGG)n Simple_repeat Simple_repeat 2 40 0 5 721 234 0 0 0 chr3R 17831924 17831950 -10073103 + (CGG)n Simple_repeat Simple_repeat 3 28 0 5 721 303 28 0 0 chr3R 17832364 17832400 -10072653 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 721 215 218 12 49 chr3R 17832483 17832565 -10072488 + A-rich Low_complexity Low_complexity 2 80 0 5 721 435 162 8 25 chr3R 17833071 17833191 -10071862 + (CAA)n Simple_repeat Simple_repeat 1 118 0 5 721 30 45 0 0 chr3R 17833656 17833700 -10071353 + AT_rich Low_complexity Low_complexity 1 44 0 5 721 23 33 0 0 chr3R 17834550 17834580 -10070473 + AT_rich Low_complexity Low_complexity 1 30 0 5 721 200 139 28 0 chr3R 17834748 17834784 -10070269 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 721 205 235 14 14 chr3R 17835240 17835309 -10069744 + A-rich Low_complexity Low_complexity 2 70 0 5 721 263 72 0 23 chr3R 17837098 17837141 -10067912 + (CAA)n Simple_repeat Simple_repeat 1 42 0 5 721 240 220 0 17 chr3R 17837520 17837580 -10067473 + (CAA)n Simple_repeat Simple_repeat 3 61 0 5 721 285 149 0 65 chr3R 17838673 17838766 -10066287 + (CAA)n Simple_repeat Simple_repeat 1 87 0 5 721 201 152 0 0 chr3R 17841099 17841132 -10063921 + GA-rich Low_complexity Low_complexity 2 34 0 5 721 21 0 0 0 chr3R 17842132 17842153 -10062900 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 21 0 0 0 chr3R 17844087 17844108 -10060945 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 23 0 0 0 chr3R 17845179 17845202 -10059851 + AT_rich Low_complexity Low_complexity 1 23 0 5 721 27 0 0 0 chr3R 17845768 17845795 -10059258 + AT_rich Low_complexity Low_complexity 1 27 0 5 721 24 67 0 0 chr3R 17851480 17851525 -10053528 + AT_rich Low_complexity Low_complexity 1 45 0 5 721 21 36 0 0 chr3R 17851571 17851599 -10053454 + AT_rich Low_complexity Low_complexity 1 28 0 5 721 252 0 0 0 chr3R 17864653 17864681 -10040372 + (CTTAA)n Simple_repeat Simple_repeat 1 28 0 5 721 21 0 0 0 chr3R 17868283 17868304 -10036749 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 275 222 14 14 chr3R 17868814 17868887 -10036166 + (CAG)n Simple_repeat Simple_repeat 3 75 0 5 721 222 62 0 0 chr3R 17871878 17871910 -10033143 + (T)n Simple_repeat Simple_repeat 1 32 0 5 721 213 132 0 0 chr3R 17873160 17873198 -10031855 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 721 219 186 0 0 chr3R 17874030 17874073 -10030980 + (ATTCG)n Simple_repeat Simple_repeat 5 47 0 5 721 234 214 18 9 chr3R 17876926 17876994 -10028059 + T-rich Low_complexity Low_complexity 1 68 0 5 721 23 33 0 0 chr3R 17877513 17877543 -10027510 + AT_rich Low_complexity Low_complexity 1 30 0 5 721 186 103 0 0 chr3R 17877964 17877993 -10027060 + (GAAAA)n Simple_repeat Simple_repeat 3 31 0 5 721 29 28 0 0 chr3R 17878779 17878815 -10026238 + AT_rich Low_complexity Low_complexity 1 36 0 5 721 21 0 0 0 chr3R 17879976 17879997 -10025056 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 203 179 0 0 chr3R 17880865 17880904 -10024149 + T-rich Low_complexity Low_complexity 1 39 0 5 721 216 0 0 0 chr3R 17881708 17881732 -10023321 + (ATG)n Simple_repeat Simple_repeat 3 26 0 5 721 243 0 0 0 chr3R 17884790 17884817 -10020236 + (A)n Simple_repeat Simple_repeat 1 27 0 5 721 22 35 0 0 chr3R 17885881 17885910 -10019143 + AT_rich Low_complexity Low_complexity 1 29 0 5 721 222 148 0 0 chr3R 17886644 17886698 -10018355 + (ATG)n Simple_repeat Simple_repeat 1 54 0 5 721 192 40 0 0 chr3R 17893695 17893720 -10011333 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 721 25 0 0 0 chr3R 17894679 17894704 -10010349 + AT_rich Low_complexity Low_complexity 1 25 0 5 721 51 51 0 0 chr3R 17895240 17895319 -10009734 + AT_rich Low_complexity Low_complexity 1 79 0 5 721 21 0 0 0 chr3R 17895772 17895793 -10009260 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 198 71 0 0 chr3R 17897241 17897269 -10007784 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 721 34 0 0 0 chr3R 17898168 17898202 -10006851 + AT_rich Low_complexity Low_complexity 1 34 0 5 721 26 0 0 0 chr3R 17898855 17898881 -10006172 + AT_rich Low_complexity Low_complexity 1 26 0 5 721 300 91 0 0 chr3R 17899518 17899562 -10005491 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 721 28 0 0 0 chr3R 17900889 17900917 -10004136 + AT_rich Low_complexity Low_complexity 1 28 0 5 721 212 179 0 0 chr3R 17900969 17901008 -10004045 + A-rich Low_complexity Low_complexity 1 39 0 5 721 213 196 0 67 chr3R 17901232 17901292 -10003761 + A-rich Low_complexity Low_complexity 4 59 0 5 721 443 128 0 11 chr3R 17901627 17901714 -10003339 + (CCAA)n Simple_repeat Simple_repeat 3 88 0 5 721 23 0 0 0 chr3R 17902964 17902987 -10002066 + AT_rich Low_complexity Low_complexity 1 23 0 5 721 307 269 19 0 chr3R 17903292 17903396 -10001657 + (CAG)n Simple_repeat Simple_repeat 2 107 0 5 721 216 111 0 0 chr3R 17903578 17903614 -10001439 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 721 206 236 0 0 chr3R 17908902 17908957 -9996096 + T-rich Low_complexity Low_complexity 1 55 0 5 721 200 200 0 0 chr3R 17910375 17910425 -9994628 + (CTA)n Simple_repeat Simple_repeat 2 51 0 5 721 26 0 0 0 chr3R 17911225 17911251 -9993802 + AT_rich Low_complexity Low_complexity 1 26 0 5 721 229 320 0 0 chr3R 17911349 17911424 -9993629 + (CCG)n Simple_repeat Simple_repeat 1 75 0 5 721 240 35 0 0 chr3R 17914196 17914225 -9990828 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 721 22 0 0 0 chr3R 17915201 17915223 -9989830 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 183 42 0 0 chr3R 17918266 17918290 -9986763 + (AACTG)n Simple_repeat Simple_repeat 5 28 0 5 721 211 216 0 0 chr3R 17920523 17920574 -9984479 + T-rich Low_complexity Low_complexity 1 51 0 5 721 187 54 0 51 chr3R 17920774 17920813 -9984240 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 721 201 74 0 0 chr3R 17923048 17923075 -9981978 + (TTCGG)n Simple_repeat Simple_repeat 5 31 0 5 721 219 69 0 0 chr3R 17924390 17924419 -9980634 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 721 203 147 0 0 chr3R 17924448 17924482 -9980571 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 721 30 0 0 0 chr3R 17924591 17924621 -9980432 + AT_rich Low_complexity Low_complexity 1 30 0 5 721 180 0 0 0 chr3R 17927353 17927373 -9977680 + (A)n Simple_repeat Simple_repeat 1 20 0 5 721 217 209 0 0 chr3R 17928765 17928808 -9976245 + (CCA)n Simple_repeat Simple_repeat 2 44 0 5 721 241 311 0 0 chr3R 17931147 17931237 -9973816 + (ATGGTG)n Simple_repeat Simple_repeat 2 91 0 5 721 258 258 0 0 chr3R 17932293 17932359 -9972694 + ROO_I LTR Pao 659 724 -7532 5 721 21 0 0 0 chr3R 17933403 17933424 -9971629 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 201 94 0 0 chr3R 17935868 17935900 -9969153 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 721 210 150 0 0 chr3R 17936850 17936890 -9968163 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 721 203 61 0 29 chr3R 17937713 17937747 -9967306 + (CATA)n Simple_repeat Simple_repeat 4 36 0 5 721 216 67 0 0 chr3R 17937824 17937854 -9967199 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 721 36 53 0 0 chr3R 17938820 17938877 -9966176 + AT_rich Low_complexity Low_complexity 1 57 0 5 721 21 82 0 0 chr3R 17941002 17941051 -9964002 + AT_rich Low_complexity Low_complexity 1 49 0 5 721 22 0 0 0 chr3R 17946308 17946330 -9958723 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 300 53 0 0 chr3R 17949528 17949566 -9955487 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 721 198 71 0 0 chr3R 17950483 17950511 -9954542 + (CAG)n Simple_repeat Simple_repeat 2 29 0 5 721 292 194 62 31 chr3R 17950923 17951019 -9954034 + ROO_I LTR Pao 650 748 -7508 5 721 309 26 0 0 chr3R 17951881 17951919 -9953134 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 721 35 0 0 0 chr3R 17954739 17954774 -9950279 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 28 29 0 0 chr3R 17956919 17956954 -9948099 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 26 30 0 0 chr3R 17958137 17958170 -9946883 + AT_rich Low_complexity Low_complexity 1 33 0 5 722 21 95 0 0 chr3R 17959066 17959129 -9945924 + AT_rich Low_complexity Low_complexity 1 63 0 5 722 219 170 0 0 chr3R 17963801 17963848 -9941205 + (ATG)n Simple_repeat Simple_repeat 1 47 0 5 722 188 200 0 18 chr3R 17963963 17964019 -9941034 + CT-rich Low_complexity Low_complexity 1 55 0 5 722 381 156 0 0 chr3R 17965790 17965867 -9939186 + (TTG)n Simple_repeat Simple_repeat 2 78 0 5 722 219 125 0 0 chr3R 17965980 17966020 -9939033 + (TTTTTG)n Simple_repeat Simple_repeat 4 43 0 5 722 207 200 29 44 chr3R 17966847 17966915 -9938138 + A-rich Low_complexity Low_complexity 5 71 0 5 722 23 0 0 0 chr3R 17967221 17967244 -9937809 + AT_rich Low_complexity Low_complexity 1 23 0 5 722 213 108 0 0 chr3R 17968597 17968634 -9936419 + (A)n Simple_repeat Simple_repeat 1 37 0 5 722 28 29 0 0 chr3R 17968893 17968928 -9936125 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 23 0 0 0 chr3R 17970108 17970131 -9934922 + AT_rich Low_complexity Low_complexity 1 23 0 5 722 205 233 22 0 chr3R 17971086 17971176 -9933877 + (CAG)n Simple_repeat Simple_repeat 3 94 0 5 722 21 0 0 0 chr3R 17971967 17971988 -9933065 + AT_rich Low_complexity Low_complexity 1 21 0 5 722 201 121 0 0 chr3R 17976074 17976107 -9928946 + (CAGTT)n Simple_repeat Simple_repeat 4 36 0 5 722 22 0 0 0 chr3R 17976286 17976308 -9928745 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 207 0 0 0 chr3R 17976507 17976530 -9928523 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 722 230 149 12 86 chr3R 17977204 17977285 -9927768 - ROO_I LTR Pao -7527 729 655 5 722 225 0 0 0 chr3R 17979208 17979233 -9925820 + (CAG)n Simple_repeat Simple_repeat 2 26 0 5 722 49 18 0 0 chr3R 17981248 17981304 -9923749 + AT_rich Low_complexity Low_complexity 1 56 0 5 722 21 36 0 0 chr3R 17982047 17982075 -9922978 + AT_rich Low_complexity Low_complexity 1 28 0 5 722 274 164 44 15 chr3R 17983866 17983934 -9921119 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 722 219 69 0 0 chr3R 17984559 17984588 -9920465 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 722 226 174 32 85 chr3R 17984634 17984728 -9920325 + ROO_I LTR Pao 639 727 -7529 5 722 206 273 0 15 chr3R 17985658 17985725 -9919328 + (CTG)n Simple_repeat Simple_repeat 3 68 0 5 722 207 114 0 0 chr3R 17986308 17986343 -9918710 + (T)n Simple_repeat Simple_repeat 1 35 0 5 722 201 129 0 0 chr3R 17987022 17987053 -9918000 + (CTG)n Simple_repeat Simple_repeat 3 33 0 5 722 26 0 0 0 chr3R 17988418 17988444 -9916609 + AT_rich Low_complexity Low_complexity 1 26 0 5 722 192 77 0 0 chr3R 17990020 17990046 -9915007 + (TATG)n Simple_repeat Simple_repeat 3 28 0 5 722 225 65 0 0 chr3R 17990605 17990636 -9914417 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 722 219 114 0 0 chr3R 17991825 17991860 -9913193 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 722 288 102 0 0 chr3R 17992098 17992147 -9912906 + (GATTG)n Simple_repeat Simple_repeat 5 53 0 5 722 180 77 0 0 chr3R 17992336 17992362 -9912691 + (ACTG)n Simple_repeat Simple_repeat 1 26 0 5 722 24 53 0 0 chr3R 17992850 17992888 -9912165 + AT_rich Low_complexity Low_complexity 1 38 0 5 722 21 57 0 0 chr3R 17993775 17993810 -9911243 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 216 97 0 0 chr3R 17994217 17994248 -9910805 + (CAG)n Simple_repeat Simple_repeat 1 31 0 5 722 194 91 30 0 chr3R 17996321 17996354 -9908699 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 722 22 35 0 0 chr3R 17996755 17996784 -9908269 + AT_rich Low_complexity Low_complexity 1 29 0 5 722 205 157 78 0 chr3R 17997622 17997673 -9907380 + A-rich Low_complexity Low_complexity 4 58 0 5 722 252 100 0 0 chr3R 17998914 17998954 -9906099 + (CTCA)n Simple_repeat Simple_repeat 3 42 0 5 722 206 105 0 26 chr3R 18002207 18002246 -9902807 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 5 722 212 116 0 44 chr3R 18002897 18002942 -9902111 + (CAT)n Simple_repeat Simple_repeat 1 43 0 5 722 213 205 0 0 chr3R 18005446 18005485 -9899568 + CT-rich Low_complexity Low_complexity 2 40 0 5 722 295 156 143 0 chr3R 18006182 18006259 -9898794 - ROO_I LTR Pao -7517 739 652 5 722 22 0 0 0 chr3R 18008236 18008258 -9896795 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 261 98 0 0 chr3R 18012005 18012046 -9893007 + (CAG)n Simple_repeat Simple_repeat 1 41 0 5 722 247 243 0 0 chr3R 18013167 18013237 -9891816 + (TGG)n Simple_repeat Simple_repeat 3 72 0 5 722 249 196 0 0 chr3R 18014526 18014577 -9890476 + (GCTG)n Simple_repeat Simple_repeat 4 54 0 5 722 24 0 0 0 chr3R 18015120 18015144 -9889909 + AT_rich Low_complexity Low_complexity 1 24 0 5 722 25 0 0 0 chr3R 18017699 18017724 -9887329 + AT_rich Low_complexity Low_complexity 1 25 0 5 722 195 69 0 0 chr3R 18018933 18018962 -9886091 + (A)n Simple_repeat Simple_repeat 1 29 0 5 722 234 91 0 0 chr3R 18020992 18021025 -9884028 + (CACAA)n Simple_repeat Simple_repeat 2 34 0 5 722 231 146 0 0 chr3R 18021062 18021103 -9883950 + (ATTCG)n Simple_repeat Simple_repeat 2 42 0 5 722 254 260 0 0 chr3R 18021208 18021281 -9883772 + A-rich Low_complexity Low_complexity 1 73 0 5 722 31 0 0 0 chr3R 18024255 18024286 -9880767 + AT_rich Low_complexity Low_complexity 1 31 0 5 722 213 241 0 17 chr3R 18025961 18026020 -9879033 + (CAGTT)n Simple_repeat Simple_repeat 2 59 0 5 722 243 88 0 0 chr3R 18026130 18026164 -9878889 + (CTG)n Simple_repeat Simple_repeat 3 36 0 5 722 192 97 0 0 chr3R 18026406 18026437 -9878616 + (CAACT)n Simple_repeat Simple_repeat 1 31 0 5 722 216 200 0 0 chr3R 18030728 18030773 -9874280 + T-rich Low_complexity Low_complexity 1 45 0 5 722 245 180 0 20 chr3R 18031318 18031369 -9873684 + (CCCGAA)n Simple_repeat Simple_repeat 6 55 0 5 722 180 0 0 0 chr3R 18031543 18031563 -9873490 + (T)n Simple_repeat Simple_repeat 1 20 0 5 722 191 125 25 0 chr3R 18033286 18033326 -9871727 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 5 722 25 0 0 0 chr3R 18035437 18035462 -9869591 + AT_rich Low_complexity Low_complexity 1 25 0 5 722 264 100 0 0 chr3R 18036178 18036218 -9868835 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 722 278 197 0 0 chr3R 18039825 18039901 -9865152 + ROO_I LTR Pao 654 729 -7527 5 722 219 114 0 0 chr3R 18042762 18042797 -9862256 + (A)n Simple_repeat Simple_repeat 1 35 0 5 722 23 54 0 0 chr3R 18042828 18042865 -9862188 + AT_rich Low_complexity Low_complexity 1 37 0 5 722 24 0 0 0 chr3R 18043137 18043161 -9861892 + AT_rich Low_complexity Low_complexity 1 24 0 5 722 192 40 0 0 chr3R 18044039 18044064 -9860989 + (CAT)n Simple_repeat Simple_repeat 3 27 0 5 722 249 242 0 52 chr3R 18044998 18045094 -9859959 + (TGAG)n Simple_repeat Simple_repeat 1 91 0 5 722 22 0 0 0 chr3R 18045375 18045397 -9859656 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 228 86 0 0 chr3R 18046318 18046353 -9858700 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 722 35 24 0 0 chr3R 18046692 18046734 -9858319 + AT_rich Low_complexity Low_complexity 1 42 0 5 722 21 36 0 0 chr3R 18052205 18052233 -9852820 + AT_rich Low_complexity Low_complexity 1 28 0 5 722 22 0 0 0 chr3R 18054359 18054381 -9850672 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 202 150 25 0 chr3R 18056744 18056784 -9848269 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 722 213 139 0 0 chr3R 18059841 18059884 -9845169 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 722 4084 0 0 2 chr3R 18060458 18060912 -9844141 - POGO DNA Pogo 0 2121 1669 5 722 7486 1 0 1 chr3R 18060916 18061722 -9843331 - POGO DNA Pogo -1316 805 1 5 722 4022 0 0 0 chr3R 18065268 18065696 -9839357 - ROO_LTR LTR Pao 0 428 1 5 722 73942 0 14 0 chr3R 18065696 18073842 -9831211 - ROO_I LTR Pao 0 8256 1 5 722 4022 0 0 0 chr3R 18073842 18074270 -9830783 - ROO_LTR LTR Pao 0 428 1 5 722 243 0 0 0 chr3R 18074520 18074547 -9830506 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 722 223 186 0 0 chr3R 18075982 18076025 -9829028 + T-rich Low_complexity Low_complexity 1 43 0 5 722 195 69 0 0 chr3R 18079204 18079233 -9825820 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 722 192 125 0 0 chr3R 18081127 18081159 -9823894 + (A)n Simple_repeat Simple_repeat 1 32 0 5 722 217 236 0 18 chr3R 18081343 18081399 -9823654 + (CAG)n Simple_repeat Simple_repeat 2 56 0 5 722 231 88 0 0 chr3R 18083326 18083360 -9821693 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 722 186 103 0 0 chr3R 18083555 18083584 -9821469 + (A)n Simple_repeat Simple_repeat 1 29 0 5 722 189 74 0 0 chr3R 18085752 18085779 -9819274 + (T)n Simple_repeat Simple_repeat 1 27 0 5 722 33 0 0 0 chr3R 18086898 18086931 -9818122 + AT_rich Low_complexity Low_complexity 1 33 0 5 723 24 0 0 0 chr3R 18090089 18090113 -9814940 + AT_rich Low_complexity Low_complexity 1 24 0 5 723 267 31 0 0 chr3R 18091729 18091761 -9813292 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 723 200 115 47 47 chr3R 18096860 18096924 -9808129 + (CAAAC)n Simple_repeat Simple_repeat 1 64 0 5 723 240 246 0 16 chr3R 18098820 18098882 -9806171 + (ATG)n Simple_repeat Simple_repeat 1 61 0 5 723 22 56 0 0 chr3R 18102900 18102936 -9802117 + AT_rich Low_complexity Low_complexity 1 36 0 5 723 189 94 0 0 chr3R 18103264 18103296 -9801757 + (A)n Simple_repeat Simple_repeat 1 32 0 5 723 211 157 19 19 chr3R 18103538 18103590 -9801463 + (CGG)n Simple_repeat Simple_repeat 2 53 0 5 723 256 191 11 11 chr3R 18104166 18104256 -9800797 + (CAG)n Simple_repeat Simple_repeat 1 90 0 5 723 186 71 0 0 chr3R 18105667 18105695 -9799358 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 723 269 156 43 43 chr3R 18107292 18107386 -9797667 + ROO_I LTR Pao 639 732 -7524 5 723 180 0 0 0 chr3R 18111920 18111940 -9793113 + (T)n Simple_repeat Simple_repeat 1 20 0 5 723 21 36 0 0 chr3R 18113271 18113299 -9791754 + AT_rich Low_complexity Low_complexity 1 28 0 5 723 207 100 0 0 chr3R 18114208 18114238 -9790815 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 5 723 26 64 0 0 chr3R 18121069 18121116 -9783937 + AT_rich Low_complexity Low_complexity 1 47 0 5 723 29 0 0 0 chr3R 18128085 18128114 -9776939 + AT_rich Low_complexity Low_complexity 1 29 0 5 723 217 226 0 0 chr3R 18132077 18132130 -9772923 + (CCA)n Simple_repeat Simple_repeat 1 53 0 5 723 264 264 0 14 chr3R 18132507 18132580 -9772473 + (TA)n Simple_repeat Simple_repeat 1 72 0 5 723 24 0 0 0 chr3R 18132783 18132807 -9772246 + AT_rich Low_complexity Low_complexity 1 24 0 5 723 25 0 0 0 chr3R 18134667 18134692 -9770361 + AT_rich Low_complexity Low_complexity 1 25 0 5 723 23 0 0 0 chr3R 18134900 18134923 -9770130 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 222 62 0 0 chr3R 18134983 18135015 -9770038 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 723 200 143 24 0 chr3R 18135476 18135518 -9769535 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 723 24 32 0 0 chr3R 18135721 18135752 -9769301 + AT_rich Low_complexity Low_complexity 1 31 0 5 723 26 0 0 0 chr3R 18135805 18135831 -9769222 + AT_rich Low_complexity Low_complexity 1 26 0 5 723 253 274 0 0 chr3R 18136834 18136907 -9768146 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 723 27 0 0 0 chr3R 18139610 18139637 -9765416 + AT_rich Low_complexity Low_complexity 1 27 0 5 723 255 31 0 0 chr3R 18143106 18143138 -9761915 + (CATTG)n Simple_repeat Simple_repeat 2 33 0 5 723 198 150 0 0 chr3R 18147910 18147950 -9757103 + (CAACT)n Simple_repeat Simple_repeat 1 40 0 5 723 31 76 0 0 chr3R 18149226 18149292 -9755761 + AT_rich Low_complexity Low_complexity 1 66 0 5 723 231 61 0 0 chr3R 18149951 18149984 -9755069 + (CAGAG)n Simple_repeat Simple_repeat 5 37 0 5 723 216 182 0 0 chr3R 18150458 18150502 -9754551 + (CAG)n Simple_repeat Simple_repeat 2 45 0 5 723 23 0 0 0 chr3R 18150722 18150745 -9754308 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 37 23 0 0 chr3R 18150856 18150900 -9754153 + AT_rich Low_complexity Low_complexity 1 44 0 5 723 235 204 0 18 chr3R 18151021 18151076 -9753977 - ROO_I LTR Pao -7528 728 675 5 723 24 0 0 0 chr3R 18151482 18151506 -9753547 + AT_rich Low_complexity Low_complexity 1 24 0 5 723 21 0 0 0 chr3R 18157536 18157557 -9747496 + AT_rich Low_complexity Low_complexity 1 21 0 5 723 21 82 0 0 chr3R 18160965 18161014 -9744039 + AT_rich Low_complexity Low_complexity 1 49 0 5 723 291 85 0 0 chr3R 18162683 18162730 -9742323 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 723 194 105 0 26 chr3R 18165624 18165663 -9739390 + (GAATG)n Simple_repeat Simple_repeat 5 42 0 5 723 338 276 38 19 chr3R 18167459 18167618 -9737435 - ROO_I LTR Pao -7477 779 618 5 723 23 54 0 0 chr3R 18170371 18170408 -9734645 + AT_rich Low_complexity Low_complexity 1 37 0 5 723 23 0 0 0 chr3R 18172906 18172929 -9732124 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 492 143 0 0 chr3R 18174027 18174104 -9730949 + DNAREP1_DM LINE Penelope 1 77 -517 5 723 357 179 0 0 chr3R 18174158 18174214 -9730839 + DNAREP1_DM LINE Penelope 434 489 -105 5 723 23 0 0 0 chr3R 18181945 18181968 -9723085 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 185 125 0 77 chr3R 18182843 18182895 -9722158 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 723 189 0 0 0 chr3R 18185498 18185519 -9719534 + (TCCC)n Simple_repeat Simple_repeat 2 22 0 5 723 23 33 0 0 chr3R 18185885 18185915 -9719138 + AT_rich Low_complexity Low_complexity 1 30 0 5 723 25 0 0 0 chr3R 18188444 18188469 -9716584 + AT_rich Low_complexity Low_complexity 1 25 0 5 723 28 0 0 0 chr3R 18205126 18205154 -9699899 + AT_rich Low_complexity Low_complexity 1 28 0 5 723 25 0 0 0 chr3R 18206897 18206922 -9698131 + AT_rich Low_complexity Low_complexity 1 25 0 5 723 264 100 0 0 chr3R 18213796 18213836 -9691217 + (TTCGG)n Simple_repeat Simple_repeat 3 42 0 5 723 27 49 0 0 chr3R 18214742 18214783 -9690270 + AT_rich Low_complexity Low_complexity 1 41 0 5 723 199 100 0 74 chr3R 18215604 18215658 -9689395 + A-rich Low_complexity Low_complexity 6 55 0 5 724 238 255 0 0 chr3R 18220971 18221018 -9684035 + (CCCGAA)n Simple_repeat Simple_repeat 2 48 0 5 724 23 0 0 0 chr3R 18222382 18222405 -9682648 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 23 0 0 0 chr3R 18224693 18224716 -9680337 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 210 37 0 0 chr3R 18226576 18226603 -9678450 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 724 34 24 0 0 chr3R 18227833 18227874 -9677179 + AT_rich Low_complexity Low_complexity 1 41 0 5 724 33 0 0 0 chr3R 18230102 18230135 -9674918 + AT_rich Low_complexity Low_complexity 1 33 0 5 724 22 0 0 0 chr3R 18231159 18231181 -9673872 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 214 351 0 0 chr3R 18238899 18238973 -9666080 + (CGG)n Simple_repeat Simple_repeat 3 76 0 5 724 724 267 56 99 chr3R 18241937 18242240 -9662813 - P_DG DNA P -160 2728 2439 5 724 357 233 0 0 chr3R 18242274 18242347 -9662706 - P_DG DNA P -410 2478 2406 5 724 189 121 0 0 chr3R 18244977 18245010 -9660043 + (TTC)n Simple_repeat Simple_repeat 2 34 0 5 724 21 36 0 0 chr3R 18246699 18246727 -9658326 + AT_rich Low_complexity Low_complexity 1 28 0 5 724 23 33 0 0 chr3R 18246933 18246963 -9658090 + AT_rich Low_complexity Low_complexity 1 30 0 5 724 267 79 0 0 chr3R 18251452 18251490 -9653563 + (CTG)n Simple_repeat Simple_repeat 3 40 0 5 724 246 105 0 0 chr3R 18251703 18251741 -9653312 + (CTG)n Simple_repeat Simple_repeat 1 38 0 5 724 267 200 0 0 chr3R 18252174 18252249 -9652804 - ROO_I LTR Pao -7539 717 643 5 724 222 286 9 9 chr3R 18252960 18253073 -9651980 + (TGG)n Simple_repeat Simple_repeat 3 115 0 5 724 201 203 26 51 chr3R 18254829 18254907 -9650146 + T-rich Low_complexity Low_complexity 1 76 0 5 724 220 200 0 0 chr3R 18255724 18255769 -9649284 + (CAGT)n Simple_repeat Simple_repeat 1 45 0 5 724 216 67 0 0 chr3R 18256301 18256331 -9648722 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 724 22 0 0 0 chr3R 18260405 18260427 -9644626 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 200 111 0 27 chr3R 18261824 18261861 -9643192 + (CAAAC)n Simple_repeat Simple_repeat 1 36 0 5 724 22 56 0 0 chr3R 18264764 18264800 -9640253 + AT_rich Low_complexity Low_complexity 1 36 0 5 724 23 0 0 0 chr3R 18264820 18264843 -9640210 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 28 0 0 0 chr3R 18272259 18272287 -9632766 + AT_rich Low_complexity Low_complexity 1 28 0 5 724 5243 34 130 1 chr3R 18276322 18277031 -9628022 + FB4_DM DNA Tc1 1 800 -3289 5 724 1838 0 0 0 chr3R 18277291 18277505 -9627548 + FB4_DM DNA Tc1 2977 3190 -899 5 724 3762 17 2 4 chr3R 18277366 18277840 -9627213 - FB4_DM DNA Tc1 -3079 1010 538 5 724 10818 8 1 48 chr3R 18277505 18278900 -9626153 + FB4_DM DNA Tc1 2760 4089 0 5 724 189 107 0 0 chr3R 18284417 18284445 -9620608 + (CCG)n Simple_repeat Simple_repeat 2 29 0 5 724 201 94 0 0 chr3R 18284815 18284847 -9620206 + (CAG)n Simple_repeat Simple_repeat 1 32 0 5 724 30 59 0 0 chr3R 18287871 18287922 -9617131 + AT_rich Low_complexity Low_complexity 1 51 0 5 724 28 48 0 0 chr3R 18290145 18290187 -9614866 + AT_rich Low_complexity Low_complexity 1 42 0 5 724 23 33 0 0 chr3R 18293979 18294009 -9611044 + AT_rich Low_complexity Low_complexity 1 30 0 5 724 220 120 20 20 chr3R 18299538 18299589 -9605464 + (CCAA)n Simple_repeat Simple_repeat 3 53 0 5 724 21 36 0 0 chr3R 18301784 18301812 -9603241 + AT_rich Low_complexity Low_complexity 1 28 0 5 724 243 190 0 0 chr3R 18302523 18302581 -9602472 + CT-rich Low_complexity Low_complexity 2 59 0 5 724 260 102 20 0 chr3R 18302733 18302782 -9602271 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 724 22 0 0 0 chr3R 18306315 18306337 -9598716 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 219 88 0 0 chr3R 18307292 18307326 -9597727 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 724 243 161 0 0 chr3R 18307776 18307832 -9597221 + (CAA)n Simple_repeat Simple_repeat 1 56 0 5 724 209 100 0 48 chr3R 18308625 18308667 -9596386 + (CAG)n Simple_repeat Simple_repeat 2 41 0 5 724 201 74 0 0 chr3R 18310447 18310474 -9594579 + (TAA)n Simple_repeat Simple_repeat 2 28 0 5 724 186 103 0 0 chr3R 18311390 18311419 -9593634 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 724 244 0 56 0 chr3R 18311597 18311633 -9593420 + (CAGTA)n Simple_repeat Simple_repeat 5 42 0 5 724 248 215 12 37 chr3R 18311644 18311726 -9593327 + (CATA)n Simple_repeat Simple_repeat 2 81 0 5 724 192 40 0 0 chr3R 18312487 18312512 -9592541 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 724 42 36 0 0 chr3R 18317399 18317455 -9587598 + AT_rich Low_complexity Low_complexity 1 56 0 5 724 22 56 0 0 chr3R 18318076 18318112 -9586941 + AT_rich Low_complexity Low_complexity 1 36 0 5 724 22 70 0 0 chr3R 18318933 18318976 -9586077 + AT_rich Low_complexity Low_complexity 1 43 0 5 724 22 0 0 0 chr3R 18319445 18319467 -9585586 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 234 0 0 0 chr3R 18320656 18320682 -9584371 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 724 222 62 0 0 chr3R 18323169 18323201 -9581852 + (CACTC)n Simple_repeat Simple_repeat 3 34 0 5 724 201 74 0 0 chr3R 18324961 18324988 -9580065 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 724 23 0 0 0 chr3R 18327388 18327411 -9577642 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 180 200 0 0 chr3R 18331063 18331113 -9573940 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 724 28 29 0 0 chr3R 18331350 18331385 -9573668 + AT_rich Low_complexity Low_complexity 1 35 0 5 724 23 33 0 0 chr3R 18331812 18331842 -9573211 + AT_rich Low_complexity Low_complexity 1 30 0 5 724 207 209 0 0 chr3R 18332515 18332558 -9572495 + (TATATG)n Simple_repeat Simple_repeat 1 43 0 5 724 252 59 0 0 chr3R 18339397 18339431 -9565622 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 724 22 0 0 0 chr3R 18343051 18343073 -9561980 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 24 32 0 0 chr3R 18345762 18345793 -9559260 + AT_rich Low_complexity Low_complexity 1 31 0 5 725 208 278 14 14 chr3R 18353556 18353629 -9551424 + (CATATA)n Simple_repeat Simple_repeat 1 73 0 5 725 381 58 0 0 chr3R 18359719 18359771 -9545282 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 725 32 26 0 0 chr3R 18361330 18361369 -9543684 + AT_rich Low_complexity Low_complexity 1 39 0 5 725 200 209 47 0 chr3R 18362701 18362744 -9542309 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 5 725 180 217 0 0 chr3R 18363718 18363764 -9541289 + (CAT)n Simple_repeat Simple_repeat 1 46 0 5 725 23 0 0 0 chr3R 18364813 18364836 -9540217 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 28 61 0 0 chr3R 18368600 18368649 -9536404 + AT_rich Low_complexity Low_complexity 1 49 0 5 725 33 0 0 0 chr3R 18374132 18374165 -9530888 + AT_rich Low_complexity Low_complexity 1 33 0 5 725 183 100 0 0 chr3R 18376150 18376180 -9528873 + (A)n Simple_repeat Simple_repeat 1 30 0 5 725 210 37 0 0 chr3R 18376685 18376712 -9528341 + (A)n Simple_repeat Simple_repeat 1 27 0 5 725 28 0 0 0 chr3R 18377304 18377332 -9527721 + AT_rich Low_complexity Low_complexity 1 28 0 5 725 21 0 0 0 chr3R 18377582 18377603 -9527450 + AT_rich Low_complexity Low_complexity 1 21 0 5 725 23 0 0 0 chr3R 18378012 18378035 -9527018 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 213 65 0 0 chr3R 18378953 18378984 -9526069 + (ATG)n Simple_repeat Simple_repeat 1 31 0 5 725 23 0 0 0 chr3R 18379552 18379575 -9525478 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 23 0 0 0 chr3R 18381063 18381086 -9523967 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 22 0 0 0 chr3R 18386322 18386344 -9518709 + AT_rich Low_complexity Low_complexity 1 22 0 5 725 219 170 0 0 chr3R 18388189 18388236 -9516817 + (TATAG)n Simple_repeat Simple_repeat 5 51 0 5 725 213 273 0 0 chr3R 18388359 18388414 -9516639 + (TCTCTG)n Simple_repeat Simple_repeat 6 60 0 5 725 255 103 0 0 chr3R 18390091 18390130 -9514923 + (TATG)n Simple_repeat Simple_repeat 2 40 0 5 725 24 32 0 0 chr3R 18390738 18390769 -9514284 + AT_rich Low_complexity Low_complexity 1 31 0 5 725 21 89 0 0 chr3R 18390802 18390858 -9514195 + AT_rich Low_complexity Low_complexity 1 56 0 5 725 26 0 0 0 chr3R 18394711 18394737 -9510316 + AT_rich Low_complexity Low_complexity 1 26 0 5 725 203 147 0 0 chr3R 18395571 18395605 -9509448 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 725 181 95 79 0 chr3R 18397260 18397323 -9507730 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 725 206 152 65 0 chr3R 18399879 18399925 -9505128 + (CGAAA)n Simple_repeat Simple_repeat 2 50 0 5 725 341 131 0 16 chr3R 18402718 18402780 -9502273 + (CCAA)n Simple_repeat Simple_repeat 2 62 0 5 725 276 111 0 0 chr3R 18405317 18405362 -9499691 + (CAG)n Simple_repeat Simple_repeat 3 47 0 5 725 232 192 19 0 chr3R 18413738 18413790 -9491263 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 725 210 250 0 0 chr3R 18414875 18414919 -9490134 + (TATG)n Simple_repeat Simple_repeat 1 44 0 5 725 29 0 0 0 chr3R 18415941 18415970 -9489083 + AT_rich Low_complexity Low_complexity 1 29 0 5 725 222 236 55 0 chr3R 18416245 18416300 -9488753 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 5 725 191 114 29 0 chr3R 18416895 18416930 -9488123 + (TATG)n Simple_repeat Simple_repeat 3 38 0 5 725 248 250 0 0 chr3R 18417758 18417814 -9487239 + (TTG)n Simple_repeat Simple_repeat 3 58 0 5 725 216 97 0 0 chr3R 18418708 18418739 -9486314 + (CAGTT)n Simple_repeat Simple_repeat 5 35 0 5 725 189 195 0 0 chr3R 18419790 18419831 -9485222 + (CATCT)n Simple_repeat Simple_repeat 3 43 0 5 725 207 184 0 0 chr3R 18420413 18420451 -9484602 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 725 300 102 0 0 chr3R 18422298 18422347 -9482706 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 725 213 154 0 0 chr3R 18425182 18425221 -9479832 + (CCGAA)n Simple_repeat Simple_repeat 3 41 0 5 725 232 182 21 74 chr3R 18426406 18426501 -9478552 + ROO_I LTR Pao 649 738 -7518 5 725 212 298 0 0 chr3R 18426594 18426651 -9478402 + (CAG)n Simple_repeat Simple_repeat 2 58 0 5 725 234 180 0 0 chr3R 18426671 18426721 -9478332 + GA-rich Low_complexity Low_complexity 2 51 0 5 725 253 254 0 0 chr3R 18426812 18426875 -9478178 + (CGA)n Simple_repeat Simple_repeat 2 64 0 5 725 201 186 27 54 chr3R 18427786 18427860 -9477193 + CT-rich Low_complexity Low_complexity 2 73 0 5 725 219 204 0 0 chr3R 18427990 18428044 -9477009 + (CAG)n Simple_repeat Simple_repeat 3 56 0 5 725 412 146 0 80 chr3R 18428647 18428759 -9476294 + ROO_I LTR Pao 641 743 -7513 5 725 207 260 0 0 chr3R 18429040 18429090 -9475963 + (TGG)n Simple_repeat Simple_repeat 2 51 0 5 725 237 205 12 37 chr3R 18431245 18431326 -9473727 + (CAG)n Simple_repeat Simple_repeat 1 79 0 5 725 26 30 0 0 chr3R 18433715 18433748 -9471305 + AT_rich Low_complexity Low_complexity 1 33 0 5 725 208 137 0 38 chr3R 18434449 18434502 -9470551 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 725 21 57 0 0 chr3R 18439267 18439302 -9465751 + AT_rich Low_complexity Low_complexity 1 35 0 5 725 233 208 0 0 chr3R 18443175 18443223 -9461830 + (TGG)n Simple_repeat Simple_repeat 3 50 0 5 725 261 0 0 0 chr3R 18449129 18449158 -9455895 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 725 222 37 0 0 chr3R 18449158 18449185 -9455868 + (ATG)n Simple_repeat Simple_repeat 1 27 0 5 725 225 154 0 0 chr3R 18449818 18449857 -9455196 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 725 180 0 0 0 chr3R 18450422 18450442 -9454611 + (A)n Simple_repeat Simple_repeat 1 20 0 5 725 213 265 0 0 chr3R 18451929 18451978 -9453075 + GA-rich Low_complexity Low_complexity 5 53 0 5 725 189 0 0 0 chr3R 18452587 18452608 -9452445 + (GA)n Simple_repeat Simple_repeat 1 21 0 5 725 183 100 0 0 chr3R 18454952 18454982 -9450071 + (CGAAT)n Simple_repeat Simple_repeat 2 31 0 5 725 29 70 0 0 chr3R 18455068 18455125 -9449928 + AT_rich Low_complexity Low_complexity 1 57 0 5 725 186 43 0 0 chr3R 18458984 18459007 -9446046 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 725 22 35 0 0 chr3R 18461609 18461638 -9443415 + AT_rich Low_complexity Low_complexity 1 29 0 5 725 228 67 0 0 chr3R 18468143 18468173 -9436880 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 725 285 51 0 0 chr3R 18469748 18469787 -9435266 + (TTA)n Simple_repeat Simple_repeat 2 40 0 5 725 41 36 0 0 chr3R 18470518 18470573 -9434480 + AT_rich Low_complexity Low_complexity 1 55 0 5 725 261 0 0 0 chr3R 18472897 18472926 -9432127 + (T)n Simple_repeat Simple_repeat 1 29 0 5 725 265 111 0 45 chr3R 18478069 18478135 -9426918 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 725 204 135 0 0 chr3R 18479868 18479905 -9425148 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 725 33 90 0 0 chr3R 18480835 18480924 -9424129 + AT_rich Low_complexity Low_complexity 1 89 0 5 726 205 162 0 0 chr3R 18481707 18481744 -9423309 + (TGGG)n Simple_repeat Simple_repeat 2 38 0 5 726 206 271 0 17 chr3R 18482608 18482668 -9422385 + (CGG)n Simple_repeat Simple_repeat 3 61 0 5 726 223 186 0 0 chr3R 18482624 18482667 -9422386 + (TGG)n Simple_repeat Simple_repeat 3 45 0 5 726 22 0 0 0 chr3R 18482954 18482976 -9422077 + AT_rich Low_complexity Low_complexity 1 22 0 5 726 198 103 0 0 chr3R 18483854 18483883 -9421170 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 726 393 86 0 0 chr3R 18484043 18484101 -9420952 + (CAG)n Simple_repeat Simple_repeat 3 60 0 5 726 399 119 0 0 chr3R 18484997 18485064 -9419989 + (TGGA)n Simple_repeat Simple_repeat 2 68 0 5 726 21 0 0 0 chr3R 18485536 18485557 -9419496 + AT_rich Low_complexity Low_complexity 1 21 0 5 726 26 0 0 0 chr3R 18486693 18486719 -9418334 + AT_rich Low_complexity Low_complexity 1 26 0 5 726 226 50 24 24 chr3R 18487208 18487249 -9417804 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 726 203 171 0 0 chr3R 18487518 18487553 -9417500 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 726 24 0 0 0 chr3R 18496541 18496565 -9408488 + AT_rich Low_complexity Low_complexity 1 24 0 5 726 216 158 0 0 chr3R 18501957 18501995 -9403058 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 726 213 132 0 0 chr3R 18506326 18506364 -9398689 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 726 24 0 0 0 chr3R 18510703 18510727 -9394326 + AT_rich Low_complexity Low_complexity 1 24 0 5 726 29 28 0 0 chr3R 18516119 18516155 -9388898 + AT_rich Low_complexity Low_complexity 1 36 0 5 726 25 0 0 0 chr3R 18523686 18523711 -9381342 + AT_rich Low_complexity Low_complexity 1 25 0 5 726 23 0 0 0 chr3R 18528597 18528620 -9376433 + AT_rich Low_complexity Low_complexity 1 23 0 5 726 21 0 0 0 chr3R 18529984 18530005 -9375048 + AT_rich Low_complexity Low_complexity 1 21 0 5 726 229 145 57 14 chr3R 18536939 18537009 -9368044 + (TTGTG)n Simple_repeat Simple_repeat 5 77 0 5 726 283 248 27 9 chr3R 18537293 18537403 -9367650 + (TA)n Simple_repeat Simple_repeat 2 113 0 5 726 252 0 0 0 chr3R 18543863 18543891 -9361162 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 726 219 222 0 0 chr3R 18545918 18545972 -9359081 + (CTG)n Simple_repeat Simple_repeat 1 54 0 5 726 289 230 0 13 chr3R 18546360 18546435 -9358618 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 726 42 20 0 0 chr3R 18547001 18547050 -9358003 + AT_rich Low_complexity Low_complexity 1 49 0 5 726 214 231 0 19 chr3R 18550020 18550073 -9354980 + (TAA)n Simple_repeat Simple_repeat 1 52 0 5 726 21 36 0 0 chr3R 18550386 18550414 -9354639 + AT_rich Low_complexity Low_complexity 1 28 0 5 726 24 77 0 0 chr3R 18552232 18552284 -9352769 + AT_rich Low_complexity Low_complexity 1 52 0 5 726 210 150 0 0 chr3R 18553030 18553070 -9351983 + (CAG)n Simple_repeat Simple_repeat 3 42 0 5 726 183 42 0 0 chr3R 18553437 18553461 -9351592 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 726 183 162 0 0 chr3R 18554713 18554750 -9350303 + A-rich Low_complexity Low_complexity 1 37 0 5 726 189 0 0 0 chr3R 18556165 18556186 -9348867 + (CAGT)n Simple_repeat Simple_repeat 2 22 0 5 726 24 32 0 0 chr3R 18556920 18556951 -9348102 + AT_rich Low_complexity Low_complexity 1 31 0 5 726 294 50 0 0 chr3R 18557414 18557454 -9347599 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 726 26 0 0 0 chr3R 18557680 18557706 -9347347 + AT_rich Low_complexity Low_complexity 1 26 0 5 726 189 0 0 0 chr3R 18558333 18558354 -9346699 + (TAA)n Simple_repeat Simple_repeat 3 23 0 5 726 1447 99 201 61 chr3R 18558803 18559082 -9345971 + PROTOP_B DNA P 1 318 -835 5 726 24 67 0 0 chr3R 18573389 18573434 -9331619 + AT_rich Low_complexity Low_complexity 1 45 0 5 726 186 43 0 0 chr3R 18576063 18576086 -9328967 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 5 726 212 260 0 0 chr3R 18577119 18577169 -9327884 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 726 231 229 0 0 chr3R 18582737 18582785 -9322268 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 5 726 195 114 0 0 chr3R 18587269 18587304 -9317749 + (AATAG)n Simple_repeat Simple_repeat 1 35 0 5 726 25 0 0 0 chr3R 18600381 18600406 -9304647 + AT_rich Low_complexity Low_complexity 1 25 0 5 726 220 220 0 0 chr3R 18603631 18603681 -9301372 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 5 726 213 39 0 0 chr3R 18607319 18607345 -9297708 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 726 30 0 0 0 chr3R 18608537 18608567 -9296486 + AT_rich Low_complexity Low_complexity 1 30 0 5 726 225 204 0 0 chr3R 18610658 18610712 -9294341 + ROO_I LTR Pao 678 731 -7525 5 726 277 263 0 0 chr3R 18610843 18610919 -9294134 + (CAG)n Simple_repeat Simple_repeat 3 78 0 5 726 261 119 0 0 chr3R 18611002 18611044 -9294009 + (CAG)n Simple_repeat Simple_repeat 3 44 0 5 726 215 274 0 0 chr3R 18611052 18611114 -9293939 + (CAA)n Simple_repeat Simple_repeat 3 64 0 5 727 237 108 0 0 chr3R 18612894 18612931 -9292122 + (CAG)n Simple_repeat Simple_repeat 1 37 0 5 727 230 305 11 0 chr3R 18613102 18613197 -9291856 + (CAG)n Simple_repeat Simple_repeat 2 97 0 5 727 242 95 0 23 chr3R 18613504 18613547 -9291506 + (CAG)n Simple_repeat Simple_repeat 3 44 0 5 727 219 167 0 0 chr3R 18613947 18613989 -9291064 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 727 327 25 0 0 chr3R 18618847 18618887 -9286166 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 727 211 232 24 24 chr3R 18619672 18619756 -9285297 + A-rich Low_complexity Low_complexity 6 89 0 5 727 21 36 0 0 chr3R 18620015 18620043 -9285010 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 273 109 0 0 chr3R 18620399 18620445 -9284608 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 727 29 0 0 0 chr3R 18620827 18620856 -9284197 + AT_rich Low_complexity Low_complexity 1 29 0 5 727 234 171 0 0 chr3R 18624687 18624757 -9280296 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 727 36 53 0 0 chr3R 18625076 18625133 -9279920 + AT_rich Low_complexity Low_complexity 1 57 0 5 727 25 0 0 0 chr3R 18625870 18625895 -9279158 + AT_rich Low_complexity Low_complexity 1 25 0 5 727 249 286 0 0 chr3R 18626846 18626930 -9278123 + (CCCA)n Simple_repeat Simple_repeat 2 85 0 5 727 23 33 0 0 chr3R 18627489 18627519 -9277534 + AT_rich Low_complexity Low_complexity 1 30 0 5 727 24 32 0 0 chr3R 18627854 18627885 -9277168 + AT_rich Low_complexity Low_complexity 1 31 0 5 727 189 0 0 0 chr3R 18629069 18629090 -9275963 + (CAG)n Simple_repeat Simple_repeat 3 23 0 5 727 398 235 0 17 chr3R 18631231 18631348 -9273705 + ROO_I LTR Pao 629 743 -7513 5 727 189 121 0 0 chr3R 18634377 18634410 -9270643 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 727 213 121 0 0 chr3R 18636451 18636484 -9268569 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 727 231 204 0 0 chr3R 18641129 18641183 -9263870 + (CTG)n Simple_repeat Simple_repeat 1 54 0 5 727 249 83 0 0 chr3R 18643128 18643164 -9261889 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 727 212 262 0 0 chr3R 18643502 18643563 -9261490 + A-rich Low_complexity Low_complexity 1 61 0 5 727 214 191 0 0 chr3R 18646940 18646982 -9258071 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 727 186 103 0 0 chr3R 18647758 18647787 -9257266 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 727 294 50 0 0 chr3R 18648378 18648418 -9256635 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 727 189 0 0 0 chr3R 18649270 18649291 -9255762 + (A)n Simple_repeat Simple_repeat 1 21 0 5 727 212 158 0 0 chr3R 18650644 18650682 -9254371 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 727 25 31 0 0 chr3R 18653769 18653801 -9251252 + AT_rich Low_complexity Low_complexity 1 32 0 5 727 22 0 0 0 chr3R 18654431 18654453 -9250600 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 24 0 0 0 chr3R 18655476 18655500 -9249553 + AT_rich Low_complexity Low_complexity 1 24 0 5 727 210 71 0 0 chr3R 18657107 18657135 -9247918 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 727 180 0 0 0 chr3R 18659330 18659350 -9245703 + (C)n Simple_repeat Simple_repeat 1 20 0 5 727 22 0 0 0 chr3R 18659871 18659893 -9245160 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 276 53 0 0 chr3R 18660907 18660945 -9244108 + (TTA)n Simple_repeat Simple_repeat 2 39 0 5 727 23 0 0 0 chr3R 18663656 18663679 -9241374 + AT_rich Low_complexity Low_complexity 1 23 0 5 727 21 36 0 0 chr3R 18665352 18665380 -9239673 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 303 28 0 0 chr3R 18668054 18668090 -9236963 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 727 28 0 0 0 chr3R 18669821 18669849 -9235204 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 213 197 0 0 chr3R 18671339 18671400 -9233653 + T-rich Low_complexity Low_complexity 1 61 0 5 727 183 114 0 0 chr3R 18671473 18671508 -9233545 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 727 22 0 0 0 chr3R 18672124 18672146 -9232907 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 243 61 0 0 chr3R 18673829 18673862 -9231191 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 727 21 36 0 0 chr3R 18676746 18676774 -9228279 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 26 0 0 0 chr3R 18678409 18678435 -9226618 + AT_rich Low_complexity Low_complexity 1 26 0 5 727 23 78 0 0 chr3R 18679716 18679767 -9225286 + AT_rich Low_complexity Low_complexity 1 51 0 5 727 228 175 0 0 chr3R 18680747 18680810 -9224243 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 727 219 229 0 0 chr3R 18683942 18683990 -9221063 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 727 208 213 0 47 chr3R 18685553 18685617 -9219436 + (TGGG)n Simple_repeat Simple_repeat 2 62 0 5 727 31 58 0 0 chr3R 18688950 18689002 -9216051 + AT_rich Low_complexity Low_complexity 1 52 0 5 727 198 118 0 0 chr3R 18689684 18689718 -9215335 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 727 201 121 0 0 chr3R 18691213 18691246 -9213807 + (CAT)n Simple_repeat Simple_repeat 1 33 0 5 727 21 0 0 0 chr3R 18691572 18691593 -9213460 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 29 0 0 0 chr3R 18692289 18692318 -9212735 + AT_rich Low_complexity Low_complexity 1 29 0 5 727 21 0 0 0 chr3R 18693002 18693023 -9212030 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 208 222 0 0 chr3R 18694071 18694125 -9210928 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 727 321 82 0 0 chr3R 18694358 18694407 -9210646 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 727 30 45 0 0 chr3R 18695249 18695293 -9209760 + AT_rich Low_complexity Low_complexity 1 44 0 5 727 201 245 0 0 chr3R 18695455 18695508 -9209545 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 727 246 128 0 0 chr3R 18696047 18696086 -9208967 + (CAG)n Simple_repeat Simple_repeat 3 41 0 5 727 213 94 0 0 chr3R 18696240 18696272 -9208781 + (CATTC)n Simple_repeat Simple_repeat 3 34 0 5 727 216 0 0 0 chr3R 18696908 18696932 -9208121 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 727 21 0 0 0 chr3R 18697238 18697259 -9207794 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 22 0 0 0 chr3R 18698797 18698819 -9206234 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 261 0 0 0 chr3R 18699903 18699932 -9205121 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 727 288 91 0 0 chr3R 18702856 18702900 -9202153 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 727 222 62 0 0 chr3R 18705040 18705072 -9199981 + (CTG)n Simple_repeat Simple_repeat 2 33 0 5 727 204 40 0 0 chr3R 18705384 18705409 -9199644 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 727 18631 1 0 0 chr3R 18706975 18708994 -9196059 + DOC LINE Jockey 1 2019 -2706 5 727 14768 2 0 0 chr3R 18708988 18710590 -9194463 + DOC LINE Jockey 3124 4725 0 5 727 243 0 0 0 chr3R 18710590 18710617 -9194436 + (A)n Simple_repeat Simple_repeat 1 27 0 5 727 189 178 0 0 chr3R 18710832 18710877 -9194176 + (TGGA)n Simple_repeat Simple_repeat 3 47 0 5 727 243 0 0 0 chr3R 18715019 18715046 -9190007 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 727 192 97 0 0 chr3R 18715205 18715236 -9189817 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 5 727 186 118 0 0 chr3R 18715480 18715514 -9189539 + (TCTA)n Simple_repeat Simple_repeat 3 36 0 5 727 25 31 0 0 chr3R 18716559 18716591 -9188462 + AT_rich Low_complexity Low_complexity 1 32 0 5 727 183 42 0 0 chr3R 18717318 18717342 -9187711 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 5 727 195 114 0 0 chr3R 18718087 18718122 -9186931 + (GGA)n Simple_repeat Simple_repeat 3 37 0 5 727 246 62 0 0 chr3R 18718605 18718637 -9186416 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 5 727 214 306 0 0 chr3R 18721535 18721620 -9183433 + A-rich Low_complexity Low_complexity 1 85 0 5 727 255 254 0 0 chr3R 18723627 18723686 -9181367 + A-rich Low_complexity Low_complexity 6 64 0 5 727 201 171 0 0 chr3R 18725758 18725793 -9179260 + T-rich Low_complexity Low_complexity 1 35 0 5 727 207 156 0 0 chr3R 18725937 18725969 -9179084 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 727 25 31 0 0 chr3R 18728752 18728784 -9176269 + AT_rich Low_complexity Low_complexity 1 32 0 5 727 216 0 0 0 chr3R 18731411 18731435 -9173618 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 727 264 227 0 15 chr3R 18733265 18733332 -9171721 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 727 273 57 0 0 chr3R 18735781 18735816 -9169237 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 727 207 277 11 46 chr3R 18737324 18737411 -9167642 + CT-rich Low_complexity Low_complexity 3 86 0 5 727 21 0 0 0 chr3R 18740629 18740650 -9164403 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 198 71 0 0 chr3R 18740981 18741009 -9164044 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 5 727 28 29 0 0 chr3R 18741828 18741863 -9163190 + AT_rich Low_complexity Low_complexity 1 35 0 5 727 192 40 0 0 chr3R 18742636 18742661 -9162392 + (A)n Simple_repeat Simple_repeat 1 25 0 5 727 23 33 0 0 chr3R 18743200 18743230 -9161823 + AT_rich Low_complexity Low_complexity 1 30 0 5 728 226 153 0 40 chr3R 18743727 18743802 -9161251 + (CAG)n Simple_repeat Simple_repeat 3 74 0 5 728 222 105 0 0 chr3R 18746952 18746990 -9158063 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 728 183 42 0 0 chr3R 18747747 18747771 -9157282 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 728 201 121 0 0 chr3R 18755428 18755461 -9149592 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 5 728 21 0 0 0 chr3R 18756003 18756024 -9149029 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 21 36 0 0 chr3R 18762140 18762168 -9142885 + AT_rich Low_complexity Low_complexity 1 28 0 5 728 237 33 0 0 chr3R 18763519 18763549 -9141504 + (CCTTG)n Simple_repeat Simple_repeat 3 32 0 5 728 24 0 0 0 chr3R 18766816 18766840 -9138213 + AT_rich Low_complexity Low_complexity 1 24 0 5 728 216 0 0 0 chr3R 18768848 18768872 -9136181 + (T)n Simple_repeat Simple_repeat 1 24 0 5 728 246 105 0 0 chr3R 18777717 18777755 -9127298 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 728 205 191 0 0 chr3R 18779235 18779277 -9125776 + (TTTAA)n Simple_repeat Simple_repeat 4 45 0 5 728 225 94 0 0 chr3R 18781000 18781032 -9124021 + (CAAGC)n Simple_repeat Simple_repeat 2 33 0 5 728 183 80 0 0 chr3R 18781259 18781284 -9123769 + (TTTCG)n Simple_repeat Simple_repeat 2 26 0 5 728 204 159 0 22 chr3R 18782688 18782733 -9122320 + (TTCTG)n Simple_repeat Simple_repeat 2 45 0 5 728 216 200 0 0 chr3R 18782933 18782978 -9122075 + (CAT)n Simple_repeat Simple_repeat 3 47 0 5 728 180 163 0 0 chr3R 18783550 18783593 -9121460 + (ATGGTG)n Simple_repeat Simple_repeat 4 46 0 5 728 202 55 0 53 chr3R 18788842 18788880 -9116173 + (CAGT)n Simple_repeat Simple_repeat 1 36 0 5 728 183 80 0 0 chr3R 18789598 18789623 -9115430 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 728 180 0 0 0 chr3R 18792032 18792052 -9113001 + (T)n Simple_repeat Simple_repeat 1 20 0 5 728 180 0 0 0 chr3R 18802873 18802893 -9102160 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 728 29 28 0 0 chr3R 18803842 18803878 -9101175 + AT_rich Low_complexity Low_complexity 1 36 0 5 728 189 94 0 0 chr3R 18805208 18805240 -9099813 + (GATTG)n Simple_repeat Simple_repeat 2 33 0 5 728 21 0 0 0 chr3R 18806140 18806161 -9098892 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 248 77 0 25 chr3R 18810736 18810776 -9094277 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 728 240 138 111 12 chr3R 18817195 18817276 -9087777 - ROO_I LTR Pao -7515 741 653 5 728 21 0 0 0 chr3R 18818742 18818763 -9086290 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 23 0 0 0 chr3R 18818880 18818903 -9086150 + AT_rich Low_complexity Low_complexity 1 23 0 5 728 43 47 0 0 chr3R 18823498 18823562 -9081491 + AT_rich Low_complexity Low_complexity 1 64 0 5 728 26 30 0 0 chr3R 18824798 18824831 -9080222 + AT_rich Low_complexity Low_complexity 1 33 0 5 728 21 0 0 0 chr3R 18825132 18825153 -9079900 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 205 200 0 0 chr3R 18825211 18825251 -9079802 + (ATG)n Simple_repeat Simple_repeat 1 40 0 5 728 21 0 0 0 chr3R 18825890 18825911 -9079142 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 207 114 0 0 chr3R 18826835 18826870 -9078183 + (CTG)n Simple_repeat Simple_repeat 3 37 0 5 728 206 156 22 0 chr3R 18829324 18829369 -9075684 + (CATA)n Simple_repeat Simple_repeat 3 48 0 5 728 180 77 0 0 chr3R 18830387 18830413 -9074640 + (GGAAA)n Simple_repeat Simple_repeat 4 29 0 5 728 201 94 0 0 chr3R 18830684 18830716 -9074337 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 728 194 91 0 29 chr3R 18834658 18834692 -9070361 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 5 728 248 91 0 22 chr3R 18838053 18838098 -9066955 + (CAGC)n Simple_repeat Simple_repeat 1 44 0 5 728 25 0 0 0 chr3R 18838819 18838844 -9066209 + AT_rich Low_complexity Low_complexity 1 25 0 5 728 29 0 0 0 chr3R 18843419 18843448 -9061605 + AT_rich Low_complexity Low_complexity 1 29 0 5 728 227 259 0 0 chr3R 18845264 18845322 -9059731 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 728 490 65 16 0 chr3R 18846586 18846648 -9058405 + DNAREP1_DM LINE Penelope 6 68 -526 5 728 489 18 0 0 chr3R 18846652 18846708 -9058345 + DNAREP1_DM LINE Penelope 539 594 0 5 728 28 29 0 0 chr3R 18846881 18846916 -9058137 + AT_rich Low_complexity Low_complexity 1 35 0 5 728 281 347 14 20 chr3R 18847574 18847721 -9057332 + (CTG)n Simple_repeat Simple_repeat 3 148 0 5 728 363 89 0 0 chr3R 18847849 18847905 -9057148 + (CTG)n Simple_repeat Simple_repeat 3 58 0 5 728 243 0 0 0 chr3R 18850275 18850302 -9054751 + (CATAC)n Simple_repeat Simple_repeat 2 28 0 5 728 246 247 0 33 chr3R 18851087 18851179 -9053874 - ROO_I LTR Pao -7523 733 645 5 728 31 0 0 0 chr3R 18853098 18853129 -9051924 + AT_rich Low_complexity Low_complexity 1 31 0 5 728 180 77 0 0 chr3R 18853880 18853906 -9051147 + (T)n Simple_repeat Simple_repeat 1 26 0 5 728 198 0 0 0 chr3R 18858176 18858198 -9046855 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 728 24 32 0 0 chr3R 18859598 18859629 -9045424 + AT_rich Low_complexity Low_complexity 1 31 0 5 728 22 35 0 0 chr3R 18862777 18862806 -9042247 + AT_rich Low_complexity Low_complexity 1 29 0 5 728 28 29 0 0 chr3R 18863377 18863412 -9041641 + AT_rich Low_complexity Low_complexity 1 35 0 5 728 222 37 0 0 chr3R 18868705 18868732 -9036321 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 728 240 250 0 0 chr3R 18869294 18869358 -9035695 + (TCCG)n Simple_repeat Simple_repeat 4 67 0 5 728 189 175 0 0 chr3R 18873008 18873048 -9032005 + A-rich Low_complexity Low_complexity 2 41 0 5 729 203 195 24 0 chr3R 18883325 18883366 -9021687 + (CAG)n Simple_repeat Simple_repeat 3 44 0 5 729 273 146 0 0 chr3R 18885648 18885696 -9019357 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 729 44 63 0 0 chr3R 18887095 18887174 -9017879 + AT_rich Low_complexity Low_complexity 1 79 0 5 729 21 0 0 0 chr3R 18893369 18893390 -9011663 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 23 0 0 0 chr3R 18898226 18898249 -9006804 + AT_rich Low_complexity Low_complexity 1 23 0 5 729 21 0 0 0 chr3R 18899916 18899937 -9005116 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 216 86 0 0 chr3R 18900174 18900209 -9004844 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 729 221 250 0 0 chr3R 18900393 18900441 -9004612 + (CAGAGA)n Simple_repeat Simple_repeat 4 51 0 5 729 209 114 0 28 chr3R 18901670 18901706 -9003347 + (TATG)n Simple_repeat Simple_repeat 4 38 0 5 729 233 307 0 9 chr3R 18901732 18901811 -9003242 + (TTG)n Simple_repeat Simple_repeat 2 80 0 5 729 375 78 0 0 chr3R 18901811 18901862 -9003191 + (CTG)n Simple_repeat Simple_repeat 1 51 0 5 729 233 307 0 9 chr3R 18901862 18901897 -9003156 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 729 22 0 0 0 chr3R 18902866 18902888 -9002165 + AT_rich Low_complexity Low_complexity 1 22 0 5 729 25 0 0 0 chr3R 18902976 18903001 -9002052 + AT_rich Low_complexity Low_complexity 1 25 0 5 729 183 162 0 0 chr3R 18904034 18904071 -9000982 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 729 225 192 0 19 chr3R 18904541 18904594 -9000459 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 729 213 94 0 0 chr3R 18907782 18907814 -8997239 + (CTTTG)n Simple_repeat Simple_repeat 4 35 0 5 729 180 163 0 0 chr3R 18908070 18908113 -8996940 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 729 266 222 0 0 chr3R 18909680 18909743 -8995310 + (TGG)n Simple_repeat Simple_repeat 3 65 0 5 729 225 132 0 0 chr3R 18910704 18910742 -8994311 + (TATG)n Simple_repeat Simple_repeat 4 41 0 5 729 186 103 0 0 chr3R 18929586 18929615 -8975438 + (CTATA)n Simple_repeat Simple_repeat 2 30 0 5 729 255 238 0 0 chr3R 18930876 18930939 -8974114 + A-rich Low_complexity Low_complexity 1 63 0 5 729 231 190 0 0 chr3R 18931774 18931832 -8973221 + CT-rich Low_complexity Low_complexity 2 59 0 5 729 189 0 0 0 chr3R 18934314 18934335 -8970718 + (T)n Simple_repeat Simple_repeat 1 21 0 5 729 229 232 24 35 chr3R 18936406 18936491 -8968562 + A-rich Low_complexity Low_complexity 2 85 0 5 729 222 37 0 0 chr3R 18939490 18939517 -8965536 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 729 207 100 0 0 chr3R 18956092 18956122 -8948931 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 729 231 146 0 0 chr3R 18956668 18956709 -8948344 + (TTG)n Simple_repeat Simple_repeat 1 41 0 5 729 240 35 0 0 chr3R 18956750 18956779 -8948274 + (CAA)n Simple_repeat Simple_repeat 1 29 0 5 729 240 200 0 0 chr3R 18956928 18956988 -8948065 + (CTG)n Simple_repeat Simple_repeat 3 62 0 5 729 233 182 0 18 chr3R 18961417 18961473 -8943580 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 729 21 0 0 0 chr3R 18963120 18963141 -8941912 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 180 97 0 0 chr3R 18963547 18963578 -8941475 + (ATTTG)n Simple_repeat Simple_repeat 4 34 0 5 729 25 0 0 0 chr3R 18967297 18967322 -8937731 + AT_rich Low_complexity Low_complexity 1 25 0 5 729 189 74 0 0 chr3R 18967677 18967704 -8937349 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 729 200 111 28 0 chr3R 18968251 18968287 -8936766 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 729 21 0 0 0 chr3R 18970529 18970550 -8934503 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 195 69 0 0 chr3R 18972779 18972808 -8932245 + (TTCGG)n Simple_repeat Simple_repeat 1 29 0 5 729 320 143 0 14 chr3R 18972932 18973003 -8932050 + (TTG)n Simple_repeat Simple_repeat 3 72 0 5 729 192 40 0 0 chr3R 18973711 18973736 -8931317 + (CAGT)n Simple_repeat Simple_repeat 1 25 0 5 729 37 52 0 0 chr3R 18974894 18974952 -8930101 + AT_rich Low_complexity Low_complexity 1 58 0 5 729 234 81 0 0 chr3R 18975270 18975307 -8929746 + (A)n Simple_repeat Simple_repeat 1 37 0 5 729 22 35 0 0 chr3R 18976509 18976538 -8928515 + AT_rich Low_complexity Low_complexity 1 29 0 5 729 23 0 0 0 chr3R 18977248 18977271 -8927782 + AT_rich Low_complexity Low_complexity 1 23 0 5 729 29 0 0 0 chr3R 18978982 18979011 -8926042 + AT_rich Low_complexity Low_complexity 1 29 0 5 729 252 309 0 0 chr3R 18982725 18982793 -8922260 + (CGTG)n Simple_repeat Simple_repeat 3 70 0 5 729 32 57 0 0 chr3R 18985114 18985167 -8919886 + AT_rich Low_complexity Low_complexity 1 53 0 5 729 21 36 0 0 chr3R 18989733 18989761 -8915292 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 21 36 0 0 chr3R 18991865 18991893 -8913160 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 21 36 0 0 chr3R 18992172 18992200 -8912853 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 297 209 0 0 chr3R 18993891 18993982 -8911071 - ROO_I LTR Pao -7515 741 651 5 729 21 0 0 0 chr3R 18994865 18994886 -8910167 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 30 0 0 0 chr3R 18999187 18999217 -8905836 + AT_rich Low_complexity Low_complexity 1 30 0 5 729 203 179 0 0 chr3R 19001185 19001224 -8903829 + CT-rich Low_complexity Low_complexity 1 39 0 5 729 23 0 0 0 chr3R 19001812 19001835 -8903218 + AT_rich Low_complexity Low_complexity 1 23 0 5 730 22 35 0 0 chr3R 19011992 19012021 -8893032 + AT_rich Low_complexity Low_complexity 1 29 0 5 730 219 254 0 0 chr3R 19012099 19012158 -8892895 + T-rich Low_complexity Low_complexity 1 59 0 5 730 22 35 0 0 chr3R 19012846 19012875 -8892178 + AT_rich Low_complexity Low_complexity 1 29 0 5 730 358 265 0 0 chr3R 19013178 19013280 -8891773 + (CTG)n Simple_repeat Simple_repeat 3 104 0 5 730 201 39 0 0 chr3R 19020439 19020465 -8884588 + (A)n Simple_repeat Simple_repeat 1 26 0 5 730 21 0 0 0 chr3R 19020681 19020702 -8884351 + AT_rich Low_complexity Low_complexity 1 21 0 5 730 21 57 0 0 chr3R 19021021 19021056 -8883997 + AT_rich Low_complexity Low_complexity 1 35 0 5 730 183 162 0 0 chr3R 19022867 19022904 -8882149 + (TATG)n Simple_repeat Simple_repeat 4 40 0 5 730 216 0 0 0 chr3R 19025015 19025039 -8880014 + (T)n Simple_repeat Simple_repeat 1 24 0 5 730 225 65 0 0 chr3R 19027023 19027054 -8877999 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 730 180 0 0 0 chr3R 19027235 19027255 -8877798 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 730 24 0 0 0 chr3R 19030641 19030665 -8874388 + AT_rich Low_complexity Low_complexity 1 24 0 5 730 183 80 0 0 chr3R 19031420 19031445 -8873608 + (CAGAC)n Simple_repeat Simple_repeat 3 27 0 5 730 195 42 0 0 chr3R 19031540 19031564 -8873489 + (T)n Simple_repeat Simple_repeat 1 24 0 5 730 272 83 21 0 chr3R 19033888 19033936 -8871117 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 730 22 0 0 0 chr3R 19035658 19035680 -8869373 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 23 0 0 0 chr3R 19036135 19036158 -8868895 + AT_rich Low_complexity Low_complexity 1 23 0 5 730 186 43 0 0 chr3R 19038086 19038109 -8866944 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 730 259 193 0 43 chr3R 19039934 19040026 -8865027 - TABOR_I LTR Gypsy -15 6321 6234 5 730 234 0 0 0 chr3R 19044712 19044738 -8860315 + (TCC)n Simple_repeat Simple_repeat 1 26 0 5 730 189 0 0 0 chr3R 19044839 19044860 -8860193 + (TCC)n Simple_repeat Simple_repeat 3 23 0 5 730 234 174 0 0 chr3R 19047185 19047231 -8857822 + GA-rich Low_complexity Low_complexity 2 47 0 5 730 201 159 0 0 chr3R 19047415 19047459 -8857594 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 730 32 43 0 42 chr3R 19048137 19048209 -8856844 + AT_rich Low_complexity Low_complexity 1 69 0 5 730 21 0 0 0 chr3R 19051412 19051433 -8853620 + AT_rich Low_complexity Low_complexity 1 21 0 5 730 204 97 0 0 chr3R 19051942 19051973 -8853080 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 730 203 61 30 0 chr3R 19052528 19052561 -8852492 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 730 225 139 0 0 chr3R 19053498 19053541 -8851512 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 730 408 88 0 0 chr3R 19054227 19054284 -8850769 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 730 214 250 0 42 chr3R 19055792 19055863 -8849190 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 5 730 22 0 0 0 chr3R 19064196 19064218 -8840835 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 255 61 0 0 chr3R 19065518 19065551 -8839502 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 730 192 125 0 0 chr3R 19069507 19069539 -8835514 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 730 22 0 0 0 chr3R 19071493 19071515 -8833538 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 23 33 0 0 chr3R 19075254 19075284 -8829769 + AT_rich Low_complexity Low_complexity 1 30 0 5 730 237 250 0 0 chr3R 19077413 19077469 -8827584 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 730 253 220 9 48 chr3R 19083934 19084039 -8821014 + T-rich Low_complexity Low_complexity 1 101 0 5 730 22 0 0 0 chr3R 19084932 19084954 -8820099 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 215 197 16 16 chr3R 19087232 19087294 -8817759 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 730 201 175 0 24 chr3R 19087774 19087815 -8817238 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 5 730 23 0 0 0 chr3R 19088376 19088399 -8816654 + AT_rich Low_complexity Low_complexity 1 23 0 5 730 204 40 0 0 chr3R 19088985 19089010 -8816043 + (TATG)n Simple_repeat Simple_repeat 2 26 0 5 730 232 232 0 0 chr3R 19091713 19091769 -8813284 + (CTG)n Simple_repeat Simple_repeat 1 56 0 5 730 24 32 0 0 chr3R 19091965 19091996 -8813057 + AT_rich Low_complexity Low_complexity 1 31 0 5 730 314 151 34 34 chr3R 19093280 19093369 -8811684 - ROO_I LTR Pao -7524 732 644 5 730 29 28 0 0 chr3R 19093589 19093625 -8811428 + AT_rich Low_complexity Low_complexity 1 36 0 5 730 21 36 0 0 chr3R 19094576 19094604 -8810449 + AT_rich Low_complexity Low_complexity 1 28 0 5 730 207 226 0 19 chr3R 19094942 19094996 -8810057 + (CAG)n Simple_repeat Simple_repeat 2 54 0 5 730 238 200 0 0 chr3R 19096235 19096300 -8808753 - ROO_I LTR Pao -7539 717 653 5 730 222 156 0 0 chr3R 19100208 19100253 -8804800 + (CTGTG)n Simple_repeat Simple_repeat 5 49 0 5 730 208 340 0 0 chr3R 19102044 19102138 -8802915 + T-rich Low_complexity Low_complexity 1 94 0 5 730 227 182 0 0 chr3R 19104661 19104705 -8800348 + CT-rich Low_complexity Low_complexity 2 45 0 5 730 33 85 0 0 chr3R 19106749 19106831 -8798222 + AT_rich Low_complexity Low_complexity 1 82 0 5 730 24 32 0 0 chr3R 19116745 19116776 -8788277 + AT_rich Low_complexity Low_complexity 1 31 0 5 730 208 216 0 0 chr3R 19118128 19118165 -8786888 + (TTG)n Simple_repeat Simple_repeat 1 37 0 5 730 251 151 45 34 chr3R 19118177 19118266 -8786787 - ROO_I LTR Pao -7523 733 644 5 730 263 303 0 27 chr3R 19118287 19118399 -8786654 + (CTG)n Simple_repeat Simple_repeat 1 109 0 5 730 28 48 0 0 chr3R 19118508 19118550 -8786503 + AT_rich Low_complexity Low_complexity 1 42 0 5 730 229 214 10 10 chr3R 19119853 19119952 -8785101 + (CTG)n Simple_repeat Simple_repeat 3 101 0 5 730 216 67 0 0 chr3R 19120009 19120039 -8785014 + (ATG)n Simple_repeat Simple_repeat 3 32 0 5 730 246 62 0 0 chr3R 19120115 19120147 -8784906 + (CTG)n Simple_repeat Simple_repeat 1 32 0 5 730 207 146 0 0 chr3R 19122112 19122153 -8782900 + (A)n Simple_repeat Simple_repeat 1 41 0 5 730 230 221 15 0 chr3R 19122770 19122838 -8782215 - ROO_I LTR Pao -7672 584 516 5 730 27 0 0 0 chr3R 19122844 19122871 -8782182 + AT_rich Low_complexity Low_complexity 1 27 0 5 730 203 245 0 36 chr3R 19124680 19124735 -8780318 + (TATG)n Simple_repeat Simple_repeat 3 55 0 5 730 228 111 0 0 chr3R 19125985 19126021 -8779032 + (CAA)n Simple_repeat Simple_repeat 3 38 0 5 730 26 0 0 0 chr3R 19130385 19130411 -8774642 + AT_rich Low_complexity Low_complexity 1 26 0 5 730 239 204 19 0 chr3R 19130521 19130575 -8774478 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 5 730 22 35 0 0 chr3R 19131601 19131630 -8773423 + AT_rich Low_complexity Low_complexity 1 29 0 5 730 216 241 0 0 chr3R 19131776 19131830 -8773223 + A-rich Low_complexity Low_complexity 5 58 0 5 730 219 69 0 0 chr3R 19132544 19132573 -8772480 + (CCA)n Simple_repeat Simple_repeat 1 29 0 5 730 24 0 0 0 chr3R 19133456 19133480 -8771573 + AT_rich Low_complexity Low_complexity 1 24 0 5 730 273 98 0 0 chr3R 19134058 19134099 -8770954 + (ATG)n Simple_repeat Simple_repeat 3 43 0 5 730 219 250 0 40 chr3R 19134178 19134253 -8770800 + A-rich Low_complexity Low_complexity 2 73 0 5 730 207 0 0 0 chr3R 19134981 19135004 -8770049 + (ATG)n Simple_repeat Simple_repeat 3 25 0 5 731 219 238 0 59 chr3R 19140359 19140444 -8764609 + A-rich Low_complexity Low_complexity 3 82 0 5 731 28 29 0 0 chr3R 19142215 19142250 -8762803 + AT_rich Low_complexity Low_complexity 1 35 0 5 731 32 0 0 0 chr3R 19144085 19144117 -8760936 + AT_rich Low_complexity Low_complexity 1 32 0 5 731 246 85 31 78 chr3R 19144133 19144197 -8760856 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 5 731 200 34 0 33 chr3R 19144571 19144601 -8760452 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 731 198 0 0 0 chr3R 19144948 19144970 -8760083 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 731 189 107 0 0 chr3R 19148883 19148911 -8756142 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 731 190 125 0 40 chr3R 19149520 19149570 -8755483 + (TTCG)n Simple_repeat Simple_repeat 1 48 0 5 731 297 118 0 0 chr3R 19150377 19150428 -8754625 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 731 192 77 0 0 chr3R 19152038 19152064 -8752989 + (ATG)n Simple_repeat Simple_repeat 1 26 0 5 731 26 30 0 0 chr3R 19157054 19157087 -8747966 + AT_rich Low_complexity Low_complexity 1 33 0 5 731 22 35 0 0 chr3R 19158811 19158840 -8746213 + AT_rich Low_complexity Low_complexity 1 29 0 5 731 221 234 0 0 chr3R 19158936 19158983 -8746070 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 731 225 214 22 56 chr3R 19159295 19159384 -8745669 + (GAGTG)n Simple_repeat Simple_repeat 3 88 0 5 731 216 273 8 83 chr3R 19159779 19159911 -8745142 + GA-rich Low_complexity Low_complexity 3 124 0 5 731 191 88 29 0 chr3R 19160534 19160568 -8744485 + (TTTCG)n Simple_repeat Simple_repeat 2 36 0 5 731 184 140 0 57 chr3R 19161056 19161109 -8743944 + T-rich Low_complexity Low_complexity 5 54 0 5 731 54 16 0 0 chr3R 19161449 19161510 -8743543 + AT_rich Low_complexity Low_complexity 1 61 0 5 731 210 71 0 0 chr3R 19162431 19162459 -8742594 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 731 244 259 0 0 chr3R 19162590 19162648 -8742405 + (TGAG)n Simple_repeat Simple_repeat 1 58 0 5 731 192 40 0 0 chr3R 19166502 19166527 -8738526 + (CCAA)n Simple_repeat Simple_repeat 4 28 0 5 731 231 294 0 14 chr3R 19167759 19167828 -8737225 + (TATATG)n Simple_repeat Simple_repeat 6 73 0 5 731 201 39 0 0 chr3R 19169145 19169171 -8735882 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 5 731 200 233 0 0 chr3R 19169435 19169478 -8735575 + (CAA)n Simple_repeat Simple_repeat 3 45 0 5 731 201 133 0 0 chr3R 19171958 19171988 -8733065 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 731 258 81 0 0 chr3R 19172330 19172367 -8732686 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 731 21 0 0 0 chr3R 19172508 19172529 -8732524 + AT_rich Low_complexity Low_complexity 1 21 0 5 731 34 24 0 0 chr3R 19172631 19172672 -8732381 + AT_rich Low_complexity Low_complexity 1 41 0 5 731 31 0 0 0 chr3R 19182929 19182960 -8722093 + AT_rich Low_complexity Low_complexity 1 31 0 5 731 27 87 0 0 chr3R 19184148 19184217 -8720836 + AT_rich Low_complexity Low_complexity 1 69 0 5 731 28 71 0 0 chr3R 19184374 19184430 -8720623 + AT_rich Low_complexity Low_complexity 1 56 0 5 731 228 307 0 0 chr3R 19186946 19187021 -8718032 + (CAG)n Simple_repeat Simple_repeat 3 77 0 5 731 21 0 0 0 chr3R 19187077 19187098 -8717955 + AT_rich Low_complexity Low_complexity 1 21 0 5 731 209 125 25 0 chr3R 19190127 19190167 -8714886 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 731 23 0 0 0 chr3R 19190487 19190510 -8714543 + AT_rich Low_complexity Low_complexity 1 23 0 5 731 307 157 43 33 chr3R 19193692 19193784 -8711269 + ROO_I LTR Pao 640 732 -7524 5 731 26 0 0 0 chr3R 19197311 19197337 -8707716 + AT_rich Low_complexity Low_complexity 1 26 0 5 731 21 36 0 0 chr3R 19198378 19198406 -8706647 + AT_rich Low_complexity Low_complexity 1 28 0 5 731 30 27 0 0 chr3R 19199930 19199967 -8705086 + AT_rich Low_complexity Low_complexity 1 37 0 5 731 207 69 0 0 chr3R 19200699 19200728 -8704325 + (TAA)n Simple_repeat Simple_repeat 3 31 0 5 731 24 67 0 0 chr3R 19200878 19200923 -8704130 + AT_rich Low_complexity Low_complexity 1 45 0 5 731 22 0 0 0 chr3R 19201379 19201401 -8703652 + AT_rich Low_complexity Low_complexity 1 22 0 5 731 21 71 0 0 chr3R 19211374 19211416 -8693637 + AT_rich Low_complexity Low_complexity 1 42 0 5 731 222 37 0 0 chr3R 19213121 19213148 -8691905 + (AACTG)n Simple_repeat Simple_repeat 1 27 0 5 731 21 0 0 0 chr3R 19213168 19213189 -8691864 + AT_rich Low_complexity Low_complexity 1 21 0 5 731 260 192 64 0 chr3R 19213565 19213643 -8691410 + (CAG)n Simple_repeat Simple_repeat 3 85 0 5 731 216 0 0 0 chr3R 19217293 19217317 -8687736 + (TAA)n Simple_repeat Simple_repeat 2 25 0 5 731 594 63 0 0 chr3R 19218385 19218464 -8686589 + (CTG)n Simple_repeat Simple_repeat 2 80 0 5 731 231 263 13 13 chr3R 19218946 19219023 -8686030 + (TTG)n Simple_repeat Simple_repeat 2 78 0 5 731 207 69 0 0 chr3R 19219081 19219110 -8685943 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 5 731 225 250 0 0 chr3R 19219696 19219760 -8685293 + A-rich Low_complexity Low_complexity 5 68 0 5 731 22 0 0 0 chr3R 19220754 19220776 -8684277 + AT_rich Low_complexity Low_complexity 1 22 0 5 731 33 25 0 0 chr3R 19222480 19222520 -8682533 + AT_rich Low_complexity Low_complexity 1 40 0 5 731 186 43 0 0 chr3R 19222619 19222642 -8682411 + (TATG)n Simple_repeat Simple_repeat 2 24 0 5 731 279 54 0 0 chr3R 19225142 19225179 -8679874 + (CAG)n Simple_repeat Simple_repeat 1 37 0 5 731 204 284 0 0 chr3R 19227292 19227366 -8677687 + A-rich Low_complexity Low_complexity 1 74 0 5 731 27 81 0 0 chr3R 19230849 19230911 -8674142 + AT_rich Low_complexity Low_complexity 1 62 0 5 731 306 155 14 27 chr3R 19234082 19234155 -8670898 - ROO_I LTR Pao -7530 726 655 5 731 325 95 32 0 chr3R 19234420 19234483 -8670570 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 731 207 114 0 0 chr3R 19235628 19235663 -8669390 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 5 731 192 97 0 0 chr3R 19235788 19235819 -8669234 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 731 240 111 0 0 chr3R 19236806 19236842 -8668211 + (CTG)n Simple_repeat Simple_repeat 1 36 0 5 731 408 118 0 0 chr3R 19237509 19237577 -8667476 + (CTG)n Simple_repeat Simple_repeat 1 68 0 5 731 22 35 0 0 chr3R 19237795 19237824 -8667229 + AT_rich Low_complexity Low_complexity 1 29 0 5 731 205 317 12 12 chr3R 19237893 19237976 -8667077 + (CCG)n Simple_repeat Simple_repeat 1 83 0 5 731 198 103 0 0 chr3R 19238068 19238097 -8666956 + (TTG)n Simple_repeat Simple_repeat 3 31 0 5 731 195 184 0 0 chr3R 19238787 19238825 -8666228 + (CTAG)n Simple_repeat Simple_repeat 2 39 0 5 731 41 36 0 0 chr3R 19239606 19239661 -8665392 + AT_rich Low_complexity Low_complexity 1 55 0 5 731 24 32 0 0 chr3R 19240202 19240233 -8664820 + AT_rich Low_complexity Low_complexity 1 31 0 5 731 267 237 0 0 chr3R 19243261 19243320 -8661733 + (CTG)n Simple_repeat Simple_repeat 1 59 0 5 731 189 107 0 0 chr3R 19243961 19243989 -8661064 + (CTG)n Simple_repeat Simple_repeat 1 28 0 5 731 192 152 0 0 chr3R 19244359 19244392 -8660661 + (CCG)n Simple_repeat Simple_repeat 1 33 0 5 731 222 211 19 0 chr3R 19245735 19245831 -8659222 + (CAG)n Simple_repeat Simple_repeat 1 97 0 5 731 189 0 0 0 chr3R 19248053 19248074 -8656979 + (CGAAT)n Simple_repeat Simple_repeat 3 23 0 5 731 255 31 0 0 chr3R 19252132 19252164 -8652889 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 731 211 293 12 12 chr3R 19253738 19253821 -8651232 + (CAA)n Simple_repeat Simple_repeat 2 84 0 5 731 22 0 0 0 chr3R 19254215 19254237 -8650816 + AT_rich Low_complexity Low_complexity 1 22 0 5 731 25 31 0 0 chr3R 19255599 19255631 -8649422 + AT_rich Low_complexity Low_complexity 1 32 0 5 731 28 0 0 0 chr3R 19258990 19259018 -8646035 + AT_rich Low_complexity Low_complexity 1 28 0 5 731 228 158 0 66 chr3R 19265523 19265584 -8639469 + ROO_I LTR Pao 664 720 -7536 5 732 228 35 0 0 chr3R 19269152 19269181 -8635872 + (CCTG)n Simple_repeat Simple_repeat 3 31 0 5 732 21 0 0 0 chr3R 19271369 19271390 -8633663 + AT_rich Low_complexity Low_complexity 1 21 0 5 732 183 186 0 0 chr3R 19273889 19273932 -8631121 + (ATTCG)n Simple_repeat Simple_repeat 3 45 0 5 732 180 77 0 0 chr3R 19275267 19275293 -8629760 + (TATG)n Simple_repeat Simple_repeat 3 28 0 5 732 24 53 0 0 chr3R 19275566 19275604 -8629449 + AT_rich Low_complexity Low_complexity 1 38 0 5 732 189 0 0 0 chr3R 19276429 19276450 -8628603 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 5 732 227 238 0 45 chr3R 19277602 19277668 -8627385 + (CTG)n Simple_repeat Simple_repeat 2 64 0 5 732 40 0 0 0 chr3R 19278088 19278128 -8626925 + AT_rich Low_complexity Low_complexity 1 40 0 5 732 21 0 0 0 chr3R 19285503 19285524 -8619529 + AT_rich Low_complexity Low_complexity 1 21 0 5 732 189 94 0 0 chr3R 19285821 19285853 -8619200 + (A)n Simple_repeat Simple_repeat 1 32 0 5 732 209 114 0 28 chr3R 19286970 19287006 -8618047 + (CAG)n Simple_repeat Simple_repeat 3 37 0 5 732 29 28 0 0 chr3R 19287415 19287451 -8617602 + AT_rich Low_complexity Low_complexity 1 36 0 5 732 207 100 0 0 chr3R 19288923 19288953 -8616100 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 5 732 189 0 0 0 chr3R 19292830 19292851 -8612202 + (T)n Simple_repeat Simple_repeat 1 21 0 5 732 23 0 0 0 chr3R 19293065 19293088 -8611965 + AT_rich Low_complexity Low_complexity 1 23 0 5 732 208 233 0 0 chr3R 19297114 19297174 -8607879 + T-rich Low_complexity Low_complexity 1 60 0 5 732 27 0 0 0 chr3R 19297503 19297530 -8607523 + AT_rich Low_complexity Low_complexity 1 27 0 5 732 280 204 9 104 chr3R 19298091 19298206 -8606847 + ROO_I LTR Pao 640 743 -7513 5 732 210 158 0 0 chr3R 19298289 19298327 -8606726 + (CAA)n Simple_repeat Simple_repeat 1 38 0 5 732 201 121 0 0 chr3R 19302400 19302433 -8602620 + (ACTG)n Simple_repeat Simple_repeat 3 35 0 5 732 240 245 0 0 chr3R 19303160 19303213 -8601840 + (CTG)n Simple_repeat Simple_repeat 1 53 0 5 732 21 36 0 0 chr3R 19303554 19303582 -8601471 + AT_rich Low_complexity Low_complexity 1 28 0 5 732 204 158 26 0 chr3R 19305418 19305456 -8599597 + (CAGAT)n Simple_repeat Simple_repeat 1 39 0 5 732 189 147 0 0 chr3R 19312870 19312904 -8592149 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 732 29 90 0 0 chr3R 19315162 19315240 -8589813 + AT_rich Low_complexity Low_complexity 1 78 0 5 732 231 88 0 0 chr3R 19316505 19316539 -8588514 + (CAAGC)n Simple_repeat Simple_repeat 4 37 0 5 732 31 58 0 0 chr3R 19317026 19317078 -8587975 + AT_rich Low_complexity Low_complexity 1 52 0 5 732 234 0 0 0 chr3R 19319324 19319350 -8585703 + (ACTG)n Simple_repeat Simple_repeat 1 26 0 5 732 41 36 0 0 chr3R 19321626 19321681 -8583372 + AT_rich Low_complexity Low_complexity 1 55 0 5 732 220 203 43 0 chr3R 19321986 19322055 -8582998 + A-rich Low_complexity Low_complexity 6 77 0 5 732 33 60 0 35 chr3R 19322319 19322406 -8582647 + AT_rich Low_complexity Low_complexity 1 84 0 5 732 189 0 0 0 chr3R 19325672 19325693 -8579360 + (A)n Simple_repeat Simple_repeat 1 21 0 5 732 207 214 24 0 chr3R 19328675 19328717 -8576336 + (ACTG)n Simple_repeat Simple_repeat 1 43 0 5 732 384 143 0 0 chr3R 19329379 19329463 -8575590 + (ACTG)n Simple_repeat Simple_repeat 3 86 0 5 732 192 158 0 0 chr3R 19330770 19330808 -8574245 + (TTTCG)n Simple_repeat Simple_repeat 5 42 0 5 732 26 30 0 0 chr3R 19334192 19334225 -8570828 + AT_rich Low_complexity Low_complexity 1 33 0 5 732 21 36 0 0 chr3R 19336477 19336505 -8568548 + AT_rich Low_complexity Low_complexity 1 28 0 5 732 22 56 0 0 chr3R 19337009 19337045 -8568008 + AT_rich Low_complexity Low_complexity 1 36 0 5 732 9202 27 10 7 chr3R 19341309 19342411 -8562642 - PROTOP_A DNA P 0 1105 1 5 732 22 35 0 0 chr3R 19342442 19342471 -8562582 + AT_rich Low_complexity Low_complexity 1 29 0 5 732 203 79 26 0 chr3R 19348731 19348769 -8556284 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 732 25 0 0 0 chr3R 19353720 19353745 -8551308 + AT_rich Low_complexity Low_complexity 1 25 0 5 732 28 29 0 0 chr3R 19355078 19355113 -8549940 + AT_rich Low_complexity Low_complexity 1 35 0 5 732 236 216 13 51 chr3R 19355999 19356077 -8548976 + GA-rich Low_complexity Low_complexity 1 75 0 5 732 198 171 0 0 chr3R 19356593 19356634 -8548419 + (ATTCG)n Simple_repeat Simple_repeat 3 43 0 5 732 34 42 0 0 chr3R 19362667 19362715 -8542338 + AT_rich Low_complexity Low_complexity 1 48 0 5 732 24 32 0 0 chr3R 19365209 19365240 -8539813 + AT_rich Low_complexity Low_complexity 1 31 0 5 732 192 77 0 0 chr3R 19376427 19376453 -8528600 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 732 32 26 0 0 chr3R 19377099 19377138 -8527915 + AT_rich Low_complexity Low_complexity 1 39 0 5 732 22 0 0 0 chr3R 19377221 19377243 -8527810 + AT_rich Low_complexity Low_complexity 1 22 0 5 732 27 87 0 0 chr3R 19381737 19381806 -8523247 + AT_rich Low_complexity Low_complexity 1 69 0 5 732 15973 1 0 0 chr3R 19384172 19385900 -8519153 - BARI_DM DNA Tc1 0 1728 1 5 732 207 69 0 0 chr3R 19395027 19395056 -8509997 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 732 21 0 0 0 chr3R 19395524 19395545 -8509508 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 204 67 0 0 chr3R 19399671 19399701 -8505352 + (GGA)n Simple_repeat Simple_repeat 2 31 0 5 733 23 0 0 0 chr3R 19400732 19400755 -8504298 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 224 30 0 29 chr3R 19404764 19404798 -8500255 + (CAATT)n Simple_repeat Simple_repeat 3 35 0 5 733 21 0 0 0 chr3R 19407429 19407450 -8497603 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 192 152 0 0 chr3R 19408668 19408701 -8496352 + G-rich Low_complexity Low_complexity 52 84 0 5 733 25 31 0 0 chr3R 19410602 19410634 -8494419 + AT_rich Low_complexity Low_complexity 1 32 0 5 733 207 162 0 0 chr3R 19410848 19410885 -8494168 + (CAA)n Simple_repeat Simple_repeat 1 37 0 5 733 33 0 0 0 chr3R 19412024 19412057 -8492996 + AT_rich Low_complexity Low_complexity 1 33 0 5 733 46 33 0 0 chr3R 19414360 19414420 -8490633 + AT_rich Low_complexity Low_complexity 1 60 0 5 733 22 0 0 0 chr3R 19417180 19417202 -8487851 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 41 36 0 0 chr3R 19417340 19417395 -8487658 + AT_rich Low_complexity Low_complexity 1 55 0 5 733 23 0 0 0 chr3R 19417629 19417652 -8487401 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 528 208 163 0 chr3R 19418962 19419140 -8485913 - DNAREP1_DM LINE Penelope -2 592 386 5 733 22 80 0 0 chr3R 19419304 19419354 -8485699 + AT_rich Low_complexity Low_complexity 1 50 0 5 733 21 0 0 0 chr3R 19423691 19423712 -8481341 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 26 64 0 0 chr3R 19425020 19425067 -8479986 + AT_rich Low_complexity Low_complexity 1 47 0 5 733 183 80 0 0 chr3R 19425409 19425434 -8479619 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 733 22 0 0 0 chr3R 19426844 19426866 -8478187 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 23 0 0 0 chr3R 19426930 19426953 -8478100 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 25 0 0 0 chr3R 19427002 19427027 -8478026 + AT_rich Low_complexity Low_complexity 1 25 0 5 733 30 0 0 0 chr3R 19427994 19428024 -8477029 + AT_rich Low_complexity Low_complexity 1 30 0 5 733 21 0 0 0 chr3R 19428871 19428892 -8476161 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 22 0 0 0 chr3R 19431962 19431984 -8473069 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 186 43 0 0 chr3R 19433218 19433241 -8471812 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 733 221 196 18 0 chr3R 19435083 19435139 -8469914 + (CAA)n Simple_repeat Simple_repeat 1 57 0 5 733 24 67 0 0 chr3R 19435194 19435239 -8469814 + AT_rich Low_complexity Low_complexity 1 45 0 5 733 21 36 0 0 chr3R 19435877 19435905 -8469148 + AT_rich Low_complexity Low_complexity 1 28 0 5 733 207 100 0 0 chr3R 19436624 19436654 -8468399 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 733 264 111 0 0 chr3R 19437477 19437522 -8467531 + (CATCC)n Simple_repeat Simple_repeat 4 48 0 5 733 24 32 0 0 chr3R 19438005 19438036 -8467017 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 24 53 0 0 chr3R 19439621 19439659 -8465394 + AT_rich Low_complexity Low_complexity 1 38 0 5 733 24 32 0 0 chr3R 19439918 19439949 -8465104 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 27 0 0 0 chr3R 19440417 19440444 -8464609 + AT_rich Low_complexity Low_complexity 1 27 0 5 733 31 0 0 0 chr3R 19443522 19443553 -8461500 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 204 40 0 0 chr3R 19449620 19449645 -8455408 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 733 22 35 0 0 chr3R 19450764 19450793 -8454260 + AT_rich Low_complexity Low_complexity 1 29 0 5 733 328 171 0 13 chr3R 19453032 19453109 -8451944 - ROO_I LTR Pao -7519 737 662 5 733 201 132 0 0 chr3R 19457365 19457403 -8447650 + (CTG)n Simple_repeat Simple_repeat 2 39 0 5 733 218 182 0 0 chr3R 19458076 19458120 -8446933 + (CAACT)n Simple_repeat Simple_repeat 5 48 0 5 733 255 133 0 0 chr3R 19459956 19460001 -8445052 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 5 733 204 40 0 0 chr3R 19460539 19460564 -8444489 + (CATTG)n Simple_repeat Simple_repeat 3 27 0 5 733 225 208 0 20 chr3R 19464526 19464575 -8440478 + (TTG)n Simple_repeat Simple_repeat 1 48 0 5 733 26 0 0 0 chr3R 19464924 19464950 -8440103 + AT_rich Low_complexity Low_complexity 1 26 0 5 733 189 121 0 0 chr3R 19468190 19468223 -8436830 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 733 192 97 0 0 chr3R 19470104 19470135 -8434918 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 5 733 21 0 0 0 chr3R 19470697 19470718 -8434335 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 217 159 0 22 chr3R 19473224 19473269 -8431784 + T-rich Low_complexity Low_complexity 2 45 0 5 733 24 0 0 0 chr3R 19473334 19473358 -8431695 + AT_rich Low_complexity Low_complexity 1 24 0 5 733 26 0 0 0 chr3R 19475257 19475283 -8429770 + AT_rich Low_complexity Low_complexity 1 26 0 5 733 23 33 0 0 chr3R 19478594 19478624 -8426429 + AT_rich Low_complexity Low_complexity 1 30 0 5 733 29 70 0 0 chr3R 19481762 19481819 -8423234 + AT_rich Low_complexity Low_complexity 1 57 0 5 733 243 0 0 0 chr3R 19482496 19482523 -8422530 + (T)n Simple_repeat Simple_repeat 1 27 0 5 733 226 204 74 0 chr3R 19485208 19485262 -8419791 - DMTOM1_LTR LTR Gypsy -6 404 347 5 733 23 33 0 0 chr3R 19485451 19485481 -8419572 + AT_rich Low_complexity Low_complexity 1 30 0 5 733 21 0 0 0 chr3R 19490012 19490033 -8415020 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 24 32 0 0 chr3R 19490465 19490496 -8414557 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 21 0 0 0 chr3R 19490807 19490828 -8414225 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 23 54 0 0 chr3R 19494799 19494836 -8410217 + AT_rich Low_complexity Low_complexity 1 37 0 5 733 200 125 25 0 chr3R 19501487 19501527 -8403526 + (TAAAA)n Simple_repeat Simple_repeat 1 41 0 5 733 234 0 0 0 chr3R 19501731 19501757 -8403296 + (T)n Simple_repeat Simple_repeat 1 26 0 5 733 189 0 0 0 chr3R 19501817 19501838 -8403215 + (CGATG)n Simple_repeat Simple_repeat 1 21 0 5 733 326 80 20 0 chr3R 19502941 19502991 -8402062 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 733 22 0 0 0 chr3R 19504397 19504419 -8400634 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 21 0 0 0 chr3R 19504485 19504506 -8400547 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 25 0 0 0 chr3R 19505585 19505610 -8399443 + AT_rich Low_complexity Low_complexity 1 25 0 5 733 21 57 0 0 chr3R 19506888 19506923 -8398130 + AT_rich Low_complexity Low_complexity 1 35 0 5 733 22 0 0 0 chr3R 19508449 19508471 -8396582 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 183 80 0 0 chr3R 19509136 19509161 -8395892 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 733 31 44 0 0 chr3R 19509996 19510041 -8395012 + AT_rich Low_complexity Low_complexity 1 45 0 5 733 3959 7 0 0 chr3R 19510473 19510901 -8394152 + ROO_LTR LTR Pao 1 428 0 5 733 23 0 0 0 chr3R 19518552 19518575 -8386478 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 21 104 0 0 chr3R 19523589 19523666 -8381387 + AT_rich Low_complexity Low_complexity 1 77 0 5 734 24 32 0 0 chr3R 19531244 19531275 -8373778 + AT_rich Low_complexity Low_complexity 1 31 0 5 734 35 0 0 0 chr3R 19532215 19532250 -8372803 + AT_rich Low_complexity Low_complexity 1 35 0 5 734 328 303 32 32 chr3R 19532847 19532973 -8372080 - XDMR Unknown Unknown -235 126 1 5 734 904 282 13 9 chr3R 19532860 19533175 -8371878 + SAR_DM Satellite Satellite 602 917 -555 5 734 947 206 112 45 chr3R 19532949 19533280 -8371773 - XDMR_DM Unknown Unknown -7 353 1 5 734 35 24 0 0 chr3R 19534378 19534420 -8370633 + AT_rich Low_complexity Low_complexity 1 42 0 5 734 45 34 0 0 chr3R 19534499 19534558 -8370495 + AT_rich Low_complexity Low_complexity 1 59 0 5 734 25 0 0 0 chr3R 19539940 19539965 -8365088 + AT_rich Low_complexity Low_complexity 1 25 0 5 734 21 36 0 0 chr3R 19542459 19542487 -8362566 + AT_rich Low_complexity Low_complexity 1 28 0 5 734 24 53 0 0 chr3R 19545005 19545043 -8360010 + AT_rich Low_complexity Low_complexity 1 38 0 5 734 27 0 0 0 chr3R 19548019 19548046 -8357007 + AT_rich Low_complexity Low_complexity 1 27 0 5 734 180 77 0 0 chr3R 19548562 19548588 -8356465 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 734 225 178 0 0 chr3R 19548857 19548902 -8356151 + (TATG)n Simple_repeat Simple_repeat 3 47 0 5 734 205 178 44 0 chr3R 19550153 19550198 -8354855 + A-rich Low_complexity Low_complexity 6 52 0 5 734 27 29 0 0 chr3R 19550923 19550957 -8354096 + AT_rich Low_complexity Low_complexity 1 34 0 5 734 215 337 10 10 chr3R 19552052 19552151 -8352902 + (TG)n Simple_repeat Simple_repeat 2 100 0 5 734 23 0 0 0 chr3R 19552622 19552645 -8352408 + AT_rich Low_complexity Low_complexity 1 23 0 5 734 24 0 0 0 chr3R 19553136 19553160 -8351893 + AT_rich Low_complexity Low_complexity 1 24 0 5 734 26 0 0 0 chr3R 19553602 19553628 -8351425 + AT_rich Low_complexity Low_complexity 1 26 0 5 734 204 143 0 0 chr3R 19553983 19554025 -8351028 + (T)n Simple_repeat Simple_repeat 1 42 0 5 734 216 200 0 0 chr3R 19561866 19561911 -8343142 + A-rich Low_complexity Low_complexity 1 45 0 5 734 732 33 0 0 chr3R 19563460 19563551 -8341502 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 5 734 232 261 0 0 chr3R 19565670 19565735 -8339318 + T-rich Low_complexity Low_complexity 1 65 0 5 734 21 0 0 0 chr3R 19566065 19566086 -8338967 + AT_rich Low_complexity Low_complexity 1 21 0 5 734 207 69 0 0 chr3R 19567035 19567064 -8337989 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 5 734 22 35 0 0 chr3R 19569158 19569187 -8335866 + AT_rich Low_complexity Low_complexity 1 29 0 5 734 62 0 0 0 chr3R 19576813 19576875 -8328178 + AT_rich Low_complexity Low_complexity 1 62 0 5 734 21 0 0 0 chr3R 19592068 19592089 -8312964 + AT_rich Low_complexity Low_complexity 1 21 0 5 734 34 0 0 0 chr3R 19598641 19598675 -8306378 + AT_rich Low_complexity Low_complexity 1 34 0 5 734 22 35 0 0 chr3R 19602988 19603017 -8302036 + AT_rich Low_complexity Low_complexity 1 29 0 5 734 214 259 0 0 chr3R 19607996 19608050 -8297003 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 734 21 0 0 0 chr3R 19611537 19611558 -8293495 + AT_rich Low_complexity Low_complexity 1 21 0 5 734 224 330 0 0 chr3R 19614538 19614629 -8290424 + (CCA)n Simple_repeat Simple_repeat 2 92 0 5 734 237 65 0 0 chr3R 19629098 19629129 -8275924 + (CTTCG)n Simple_repeat Simple_repeat 4 34 0 5 734 26 0 0 0 chr3R 19634673 19634699 -8270354 + AT_rich Low_complexity Low_complexity 1 26 0 5 734 47 33 0 0 chr3R 19635034 19635095 -8269958 + AT_rich Low_complexity Low_complexity 1 61 0 5 734 192 97 0 0 chr3R 19635526 19635557 -8269496 + (T)n Simple_repeat Simple_repeat 1 31 0 5 734 371 282 6 23 chr3R 19642442 19642616 -8262437 + (CTG)n Simple_repeat Simple_repeat 1 171 0 5 734 21 36 0 0 chr3R 19646072 19646100 -8258953 + AT_rich Low_complexity Low_complexity 1 28 0 5 734 184 131 21 21 chr3R 19649547 19649594 -8255459 + A-rich Low_complexity Low_complexity 1 47 0 5 734 246 105 0 0 chr3R 19651341 19651379 -8253674 + (TTG)n Simple_repeat Simple_repeat 1 38 0 5 734 242 235 15 0 chr3R 19652850 19652918 -8252135 + (CA)n Simple_repeat Simple_repeat 1 69 0 5 734 25 0 0 0 chr3R 19656532 19656557 -8248496 + AT_rich Low_complexity Low_complexity 1 25 0 5 734 192 40 0 0 chr3R 19657440 19657465 -8247588 + (TTGG)n Simple_repeat Simple_repeat 4 28 0 5 734 297 75 0 0 chr3R 19658001 19658041 -8247012 + (TATG)n Simple_repeat Simple_repeat 4 43 0 5 734 25 31 0 0 chr3R 19659340 19659372 -8245681 + AT_rich Low_complexity Low_complexity 1 32 0 5 734 198 128 0 0 chr3R 19659776 19659815 -8245238 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 5 735 4017 0 0 0 chr3R 19661180 19661608 -8243445 + ROO_LTR LTR Pao 1 428 0 5 735 58050 1 2 0 chr3R 19661608 19669845 -8235208 + ROO_I LTR Pao 1 8256 0 5 735 4022 0 0 0 chr3R 19669845 19670273 -8234780 + ROO_LTR LTR Pao 1 428 0 5 735 225 0 0 0 chr3R 19671292 19671317 -8233736 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 735 23 0 0 0 chr3R 19671428 19671451 -8233602 + AT_rich Low_complexity Low_complexity 1 23 0 5 735 306 0 0 0 chr3R 19676138 19676172 -8228881 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 735 4711 4 2 0 chr3R 19676834 19677351 -8227702 - NOMAD_LTR LTR Gypsy 0 518 1 5 735 61405 1 0 1 chr3R 19677351 19683927 -8221126 - NOMAD_I LTR Gypsy 0 6572 1 5 735 4711 4 2 0 chr3R 19683927 19684444 -8220609 - NOMAD_LTR LTR Gypsy 0 518 1 5 735 207 186 27 54 chr3R 19685900 19685974 -8219079 + T-rich Low_complexity Low_complexity 4 75 0 5 735 22 0 0 0 chr3R 19687693 19687715 -8217338 + AT_rich Low_complexity Low_complexity 1 22 0 5 735 24 0 0 0 chr3R 19691455 19691479 -8213574 + AT_rich Low_complexity Low_complexity 1 24 0 5 735 186 118 0 0 chr3R 19697171 19697205 -8207848 + (CAT)n Simple_repeat Simple_repeat 1 34 0 5 735 22 0 0 0 chr3R 19698184 19698206 -8206847 + AT_rich Low_complexity Low_complexity 1 22 0 5 735 219 188 0 0 chr3R 19698987 19699035 -8206018 + (CGAAT)n Simple_repeat Simple_repeat 4 51 0 5 735 274 224 0 0 chr3R 19699684 19699782 -8205271 + ROO_I LTR Pao 646 743 -7513 5 735 213 39 0 0 chr3R 19702214 19702240 -8202813 + (CATA)n Simple_repeat Simple_repeat 3 28 0 5 735 183 80 0 0 chr3R 19703649 19703674 -8201379 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 735 204 40 0 0 chr3R 19704599 19704624 -8200429 + (TAAAG)n Simple_repeat Simple_repeat 1 25 0 5 735 192 40 0 0 chr3R 19707046 19707071 -8197982 + (CAT)n Simple_repeat Simple_repeat 2 26 0 5 735 23 0 0 0 chr3R 19709386 19709409 -8195644 + AT_rich Low_complexity Low_complexity 1 23 0 5 735 234 0 0 0 chr3R 19709724 19709750 -8195303 + (CAAGC)n Simple_repeat Simple_repeat 2 27 0 5 735 22 35 0 0 chr3R 19710466 19710495 -8194558 + AT_rich Low_complexity Low_complexity 1 29 0 5 735 25 0 0 0 chr3R 19712192 19712217 -8192836 + AT_rich Low_complexity Low_complexity 1 25 0 5 735 245 219 27 0 chr3R 19712373 19712446 -8192607 + (CAA)n Simple_repeat Simple_repeat 3 77 0 5 735 28 0 0 0 chr3R 19712882 19712910 -8192143 + AT_rich Low_complexity Low_complexity 1 28 0 5 735 194 128 0 25 chr3R 19713240 19713280 -8191773 + (TTG)n Simple_repeat Simple_repeat 1 39 0 5 735 924 73 0 8 chr3R 19716928 19717053 -8188000 + DNAREP1_DM LINE Penelope 1 124 -470 5 735 264 163 0 0 chr3R 19717115 19717158 -8187895 + DNAREP1_DM LINE Penelope 123 165 -429 5 735 797 85 93 0 chr3R 19717171 19717289 -8187764 + DNAREP1_DM LINE Penelope 435 563 -31 5 735 30 27 0 0 chr3R 19719983 19720020 -8185033 + AT_rich Low_complexity Low_complexity 1 37 0 5 735 300 91 0 0 chr3R 19721018 19721062 -8183991 + (CTG)n Simple_repeat Simple_repeat 1 44 0 5 735 21 0 0 0 chr3R 19721743 19721764 -8183289 + AT_rich Low_complexity Low_complexity 1 21 0 5 735 257 203 0 0 chr3R 19725021 19725080 -8179973 - ROO_I LTR Pao -7523 733 675 5 735 342 147 0 0 chr3R 19729028 19729096 -8175957 - ROO_I LTR Pao -7524 732 665 5 735 180 125 0 0 chr3R 19729444 19729476 -8175577 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 735 222 37 0 0 chr3R 19731105 19731132 -8173921 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 735 278 106 21 0 chr3R 19732139 19732186 -8172867 + (CACTC)n Simple_repeat Simple_repeat 1 48 0 5 735 216 0 0 0 chr3R 19732295 19732319 -8172734 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 735 180 77 0 0 chr3R 19732738 19732764 -8172289 + (GGA)n Simple_repeat Simple_repeat 1 26 0 5 735 233 200 40 0 chr3R 19733097 19733147 -8171906 + (CATTC)n Simple_repeat Simple_repeat 5 56 0 5 735 191 96 0 71 chr3R 19734346 19734402 -8170651 + (CATCC)n Simple_repeat Simple_repeat 4 55 0 5 735 214 208 40 40 chr3R 19734840 19734915 -8170138 + (CATA)n Simple_repeat Simple_repeat 4 78 0 5 735 213 208 19 19 chr3R 19735503 19735557 -8169496 + T-rich Low_complexity Low_complexity 2 55 0 5 735 216 0 0 0 chr3R 19738213 19738237 -8166816 + (CGGT)n Simple_repeat Simple_repeat 4 27 0 5 735 246 220 0 0 chr3R 19738456 19738515 -8166538 + (CAA)n Simple_repeat Simple_repeat 1 59 0 5 735 241 245 0 0 chr3R 19738798 19738847 -8166206 + (TCG)n Simple_repeat Simple_repeat 1 49 0 5 735 255 103 0 0 chr3R 19741330 19741369 -8163684 + (CATCT)n Simple_repeat Simple_repeat 1 39 0 5 735 210 37 0 0 chr3R 19741408 19741435 -8163618 + (CAT)n Simple_repeat Simple_repeat 3 29 0 5 735 23 0 0 0 chr3R 19742204 19742227 -8162826 + AT_rich Low_complexity Low_complexity 1 23 0 5 735 209 186 0 0 chr3R 19744432 19744475 -8160578 + (CTG)n Simple_repeat Simple_repeat 1 43 0 5 735 273 119 0 0 chr3R 19746025 19746067 -8158986 + (CTG)n Simple_repeat Simple_repeat 3 44 0 5 735 210 225 24 36 chr3R 19746106 19746189 -8158864 + (CTG)n Simple_repeat Simple_repeat 2 83 0 5 735 354 134 0 0 chr3R 19746210 19746277 -8158776 + (CTG)n Simple_repeat Simple_repeat 3 69 0 5 735 227 185 8 150 chr3R 19746386 19746513 -8158540 - ROO_I LTR Pao -7515 741 633 5 735 28 0 0 0 chr3R 19747523 19747551 -8157502 + AT_rich Low_complexity Low_complexity 1 28 0 5 735 180 0 0 0 chr3R 19748211 19748231 -8156822 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 735 25 0 0 0 chr3R 19748528 19748553 -8156500 + AT_rich Low_complexity Low_complexity 1 25 0 5 735 22 35 0 0 chr3R 19748907 19748936 -8156117 + AT_rich Low_complexity Low_complexity 1 29 0 5 735 21 0 0 0 chr3R 19752133 19752154 -8152899 + AT_rich Low_complexity Low_complexity 1 21 0 5 735 24 53 0 0 chr3R 19753465 19753503 -8151550 + AT_rich Low_complexity Low_complexity 1 38 0 5 735 24 53 0 0 chr3R 19758465 19758503 -8146550 + AT_rich Low_complexity Low_complexity 1 38 0 5 735 192 40 0 0 chr3R 19763053 19763078 -8141975 + (TAGA)n Simple_repeat Simple_repeat 2 26 0 5 735 24 0 0 0 chr3R 19763361 19763385 -8141668 + AT_rich Low_complexity Low_complexity 1 24 0 5 735 180 0 0 0 chr3R 19767869 19767889 -8137164 + (A)n Simple_repeat Simple_repeat 1 20 0 5 735 198 0 0 0 chr3R 19774271 19774293 -8130760 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 735 26 30 0 0 chr3R 19776653 19776686 -8128367 + AT_rich Low_complexity Low_complexity 1 33 0 5 735 21 57 0 0 chr3R 19784189 19784224 -8120829 + AT_rich Low_complexity Low_complexity 1 35 0 5 735 189 178 0 0 chr3R 19787240 19787285 -8117768 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 735 191 88 0 29 chr3R 19789182 19789217 -8115836 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 735 264 231 0 15 chr3R 19789461 19789527 -8115526 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 5 735 235 316 0 0 chr3R 19790893 19790969 -8114084 + CT-rich Low_complexity Low_complexity 2 77 0 5 735 183 139 0 0 chr3R 19791117 19791153 -8113900 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 91 267 169 0 0 chr3R 19791838 19791909 -8113144 + (CAG)n Simple_repeat Simple_repeat 2 72 0 5 736 24 85 0 0 chr3R 19795312 19795371 -8109682 + AT_rich Low_complexity Low_complexity 1 59 0 5 736 22 35 0 0 chr3R 19795915 19795944 -8109109 + AT_rich Low_complexity Low_complexity 1 29 0 5 736 221 212 15 15 chr3R 19799732 19799799 -8105254 + T-rich Low_complexity Low_complexity 6 72 0 5 736 22 0 0 0 chr3R 19803603 19803625 -8101428 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 33 25 0 0 chr3R 19806082 19806122 -8098931 + AT_rich Low_complexity Low_complexity 1 40 0 5 736 285 128 0 0 chr3R 19806389 19806436 -8098617 + (CAG)n Simple_repeat Simple_repeat 3 49 0 5 736 225 193 0 50 chr3R 19806893 19806953 -8098100 + (CACAC)n Simple_repeat Simple_repeat 3 59 0 5 736 210 224 0 0 chr3R 19807741 19807790 -8097263 + (CAG)n Simple_repeat Simple_repeat 1 49 0 5 736 205 191 0 0 chr3R 19808942 19808984 -8096069 + A-rich Low_complexity Low_complexity 1 42 0 5 736 289 161 11 65 chr3R 19810137 19810230 -8094823 + A-rich Low_complexity Low_complexity 2 89 0 5 736 25 31 0 0 chr3R 19810966 19810998 -8094055 + AT_rich Low_complexity Low_complexity 1 32 0 5 736 25 0 0 0 chr3R 19823873 19823898 -8081155 + AT_rich Low_complexity Low_complexity 1 25 0 5 736 200 216 0 19 chr3R 19827568 19827620 -8077433 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 736 22 0 0 0 chr3R 19828890 19828912 -8076141 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 218 154 19 37 chr3R 19828960 19829014 -8076039 + (CAACG)n Simple_repeat Simple_repeat 5 57 0 5 736 22 0 0 0 chr3R 19829504 19829526 -8075527 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 240 100 0 0 chr3R 19831304 19831344 -8073709 + (T)n Simple_repeat Simple_repeat 1 40 0 5 736 23 92 0 0 chr3R 19831981 19832046 -8073007 + AT_rich Low_complexity Low_complexity 1 65 0 5 736 180 0 0 0 chr3R 19832097 19832117 -8072936 + (T)n Simple_repeat Simple_repeat 1 20 0 5 736 201 74 0 0 chr3R 19835416 19835443 -8069610 + (CAG)n Simple_repeat Simple_repeat 2 28 0 5 736 222 62 0 0 chr3R 19835631 19835663 -8069390 + (CATTC)n Simple_repeat Simple_repeat 5 36 0 5 736 208 137 0 89 chr3R 19836513 19836569 -8068484 + (TGGG)n Simple_repeat Simple_repeat 3 53 0 5 736 214 233 0 0 chr3R 19837885 19837928 -8067125 + C-rich Low_complexity Low_complexity 2 44 0 5 736 186 43 0 0 chr3R 19839924 19839947 -8065106 + (T)n Simple_repeat Simple_repeat 1 23 0 5 736 216 122 0 0 chr3R 19844303 19844344 -8060709 + (ACTG)n Simple_repeat Simple_repeat 3 43 0 5 736 24 32 0 0 chr3R 19849322 19849353 -8055700 + AT_rich Low_complexity Low_complexity 1 31 0 5 736 284 333 0 8 chr3R 19850386 19850519 -8054534 + (TTG)n Simple_repeat Simple_repeat 1 132 0 5 736 213 65 0 0 chr3R 19851784 19851815 -8053238 + (CAG)n Simple_repeat Simple_repeat 2 32 0 5 736 237 83 0 0 chr3R 19856099 19856135 -8048918 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 5 736 192 40 0 0 chr3R 19856826 19856851 -8048202 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 5 736 200 128 26 0 chr3R 19857115 19857154 -8047899 + CT-rich Low_complexity Low_complexity 2 41 0 5 736 24 53 0 0 chr3R 19865275 19865313 -8039740 + AT_rich Low_complexity Low_complexity 1 38 0 5 736 236 315 0 0 chr3R 19870228 19870301 -8034752 + (CGG)n Simple_repeat Simple_repeat 1 73 0 5 736 204 229 0 0 chr3R 19873043 19873091 -8031962 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 736 25 31 0 0 chr3R 19880812 19880844 -8024209 + AT_rich Low_complexity Low_complexity 1 32 0 5 736 21 0 0 0 chr3R 19888117 19888138 -8016915 + AT_rich Low_complexity Low_complexity 1 21 0 5 736 22 0 0 0 chr3R 19889062 19889084 -8015969 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 214 250 47 23 chr3R 19890313 19890399 -8014654 + T-rich Low_complexity Low_complexity 3 90 0 5 736 227 219 14 14 chr3R 19890587 19890661 -8014392 + T-rich Low_complexity Low_complexity 3 76 0 5 736 21 36 0 0 chr3R 19891024 19891052 -8014001 + AT_rich Low_complexity Low_complexity 1 28 0 5 736 204 256 26 0 chr3R 19891103 19891181 -8013872 + (TA)n Simple_repeat Simple_repeat 1 80 0 5 736 180 135 0 0 chr3R 19891312 19891349 -8013704 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 736 26 30 0 0 chr3R 19891843 19891876 -8013177 + AT_rich Low_complexity Low_complexity 1 33 0 5 736 24 53 0 0 chr3R 19891968 19892006 -8013047 + AT_rich Low_complexity Low_complexity 1 38 0 5 736 24 53 0 0 chr3R 19892810 19892848 -8012205 + AT_rich Low_complexity Low_complexity 1 38 0 5 736 34 0 0 0 chr3R 19892973 19893007 -8012046 + AT_rich Low_complexity Low_complexity 1 34 0 5 736 28 48 0 0 chr3R 19894518 19894560 -8010493 + AT_rich Low_complexity Low_complexity 1 42 0 5 736 28 0 0 0 chr3R 19895374 19895402 -8009651 + AT_rich Low_complexity Low_complexity 1 28 0 5 736 225 0 0 0 chr3R 19895768 19895793 -8009260 + (GGTTG)n Simple_repeat Simple_repeat 2 26 0 5 736 255 31 0 0 chr3R 19897589 19897621 -8007432 + (CAT)n Simple_repeat Simple_repeat 3 34 0 5 736 3048 6 0 22 chr3R 19897882 19898242 -8006811 - LINEJ1_DM LINE Jockey 0 5020 4669 5 736 225 0 0 0 chr3R 19898827 19898852 -8006201 + (CACTC)n Simple_repeat Simple_repeat 1 25 0 5 736 222 37 0 0 chr3R 19900513 19900540 -8004513 + (CGATA)n Simple_repeat Simple_repeat 5 31 0 5 736 306 0 0 0 chr3R 19900712 19900746 -8004307 + (CAA)n Simple_repeat Simple_repeat 2 35 0 5 736 4649 2 2 10 chr3R 19902692 19903202 -8001851 - HOBO DNA hAT 0 3016 2511 5 736 8492 1 0 0 chr3R 19903194 19904098 -8000955 - HOBO DNA hAT -2112 904 1 5 736 405 95 0 0 chr3R 19905473 19905536 -7999517 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 736 342 0 0 0 chr3R 19905885 19905923 -7999130 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 736 224 191 0 41 chr3R 19907269 19907318 -7997735 + (CATA)n Simple_repeat Simple_repeat 1 47 0 5 736 233 241 0 18 chr3R 19908460 19908515 -7996538 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 736 234 0 0 0 chr3R 19911463 19911489 -7993564 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 736 207 114 0 0 chr3R 19913930 19913965 -7991088 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 736 22 0 0 0 chr3R 19915622 19915644 -7989409 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 27 0 0 0 chr3R 19921443 19921470 -7983583 + AT_rich Low_complexity Low_complexity 1 27 0 5 737 212 59 0 29 chr3R 19923105 19923140 -7981913 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 5 737 210 234 38 25 chr3R 19924619 19924698 -7980355 + (TAAA)n Simple_repeat Simple_repeat 2 81 0 5 737 213 159 23 0 chr3R 19927303 19927347 -7977706 + T-rich Low_complexity Low_complexity 6 50 0 5 737 201 156 0 0 chr3R 19930917 19930949 -7974104 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 737 206 229 16 0 chr3R 19931047 19931108 -7973945 + CT-rich Low_complexity Low_complexity 1 62 0 5 737 21 57 0 0 chr3R 19931702 19931737 -7973316 + AT_rich Low_complexity Low_complexity 1 35 0 5 737 25 0 0 0 chr3R 19932175 19932200 -7972853 + AT_rich Low_complexity Low_complexity 1 25 0 5 737 233 57 29 0 chr3R 19934406 19934441 -7970612 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 737 27 100 0 0 chr3R 19934907 19934997 -7970056 + AT_rich Low_complexity Low_complexity 1 90 0 5 737 33 56 0 0 chr3R 19938569 19938623 -7966430 + AT_rich Low_complexity Low_complexity 1 54 0 5 737 21 0 0 0 chr3R 19939592 19939613 -7965440 + AT_rich Low_complexity Low_complexity 1 21 0 5 737 25 0 0 0 chr3R 19939760 19939785 -7965268 + AT_rich Low_complexity Low_complexity 1 25 0 5 737 239 79 26 0 chr3R 19939817 19939855 -7965198 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 737 500 77 0 13 chr3R 19939953 19940032 -7965021 + (TA)n Simple_repeat Simple_repeat 2 79 0 5 737 221 175 0 0 chr3R 19943213 19943253 -7961800 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 737 24 67 0 0 chr3R 19944652 19944697 -7960356 + AT_rich Low_complexity Low_complexity 1 45 0 5 737 198 0 0 0 chr3R 19946240 19946262 -7958791 + (GGA)n Simple_repeat Simple_repeat 1 22 0 5 737 231 250 0 0 chr3R 19960002 19960066 -7944987 + (CAG)n Simple_repeat Simple_repeat 3 66 0 5 737 273 204 0 0 chr3R 19964307 19964361 -7940692 + DNAREP1_DM LINE Penelope 5 58 -536 5 737 284 116 0 0 chr3R 19964476 19964519 -7940534 + DNAREP1_DM LINE Penelope 551 593 -1 5 737 34 0 0 0 chr3R 19966481 19966515 -7938538 + AT_rich Low_complexity Low_complexity 1 34 0 5 737 24 32 0 0 chr3R 19966980 19967011 -7938042 + AT_rich Low_complexity Low_complexity 1 31 0 5 737 27 73 0 0 chr3R 19974753 19974808 -7930245 + AT_rich Low_complexity Low_complexity 1 55 0 5 737 31 58 0 0 chr3R 19977762 19977814 -7927239 + AT_rich Low_complexity Low_complexity 1 52 0 5 737 35 71 0 0 chr3R 19977882 19977952 -7927101 + AT_rich Low_complexity Low_complexity 1 70 0 5 737 24 32 0 0 chr3R 19980882 19980913 -7924140 + AT_rich Low_complexity Low_complexity 1 31 0 5 737 25 31 0 0 chr3R 19982522 19982554 -7922499 + AT_rich Low_complexity Low_complexity 1 32 0 5 737 34 55 0 0 chr3R 19987270 19987325 -7917728 + AT_rich Low_complexity Low_complexity 1 55 0 5 737 22 0 0 0 chr3R 19989551 19989573 -7915480 + AT_rich Low_complexity Low_complexity 1 22 0 5 737 231 103 0 0 chr3R 19998573 19998612 -7906441 + (A)n Simple_repeat Simple_repeat 1 39 0 5 737 210 160 0 0 chr3R 20004906 20004956 -7900097 + CT-rich Low_complexity Low_complexity 1 50 0 5 737 207 0 0 0 chr3R 20010593 20010616 -7894437 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 5 737 295 250 95 0 chr3R 20010851 20010935 -7894118 - DNAREP1_DM LINE Penelope -115 479 388 5 737 382 272 0 0 chr3R 20010969 20011083 -7893970 - DNAREP1_DM LINE Penelope -480 114 1 5 737 203 357 0 0 chr3R 20023981 20024051 -7881002 + C-rich Low_complexity Low_complexity 6 75 0 5 737 34 24 0 0 chr3R 20026845 20026886 -7878167 + AT_rich Low_complexity Low_complexity 1 41 0 5 737 207 125 0 0 chr3R 20026939 20026979 -7878074 + (T)n Simple_repeat Simple_repeat 1 40 0 5 737 186 103 0 0 chr3R 20027302 20027331 -7877722 + (CAT)n Simple_repeat Simple_repeat 3 31 0 5 737 23 33 0 0 chr3R 20029376 20029406 -7875647 + AT_rich Low_complexity Low_complexity 1 30 0 5 737 208 147 0 0 chr3R 20030905 20030939 -7874114 + (T)n Simple_repeat Simple_repeat 1 34 0 5 737 249 226 0 31 chr3R 20031894 20031958 -7873095 + (CCTAT)n Simple_repeat Simple_repeat 3 64 0 5 737 22 0 0 0 chr3R 20032154 20032176 -7872877 + AT_rich Low_complexity Low_complexity 1 22 0 5 737 2221 11 26 11 chr3R 20032990 20033261 -7871792 + BLASTOPIA_LTR LTR Gypsy 1 275 0 5 737 41571 1 1 0 chr3R 20033261 20037738 -7867315 + BLASTOPIA_I LTR Gypsy 1 4481 0 5 737 2221 11 26 11 chr3R 20037738 20038009 -7867044 + BLASTOPIA_LTR LTR Gypsy 1 275 0 5 737 21 0 0 0 chr3R 20038342 20038363 -7866690 + AT_rich Low_complexity Low_complexity 1 21 0 5 737 252 86 0 0 chr3R 20038917 20038952 -7866101 + (ATG)n Simple_repeat Simple_repeat 3 37 0 5 737 246 81 0 0 chr3R 20039502 20039539 -7865514 + (CAA)n Simple_repeat Simple_repeat 1 37 0 5 737 22 35 0 0 chr3R 20040272 20040301 -7864752 + AT_rich Low_complexity Low_complexity 1 29 0 5 737 22 0 0 0 chr3R 20040576 20040598 -7864455 + AT_rich Low_complexity Low_complexity 1 22 0 5 737 192 125 0 0 chr3R 20040751 20040783 -7864270 + (CAAGC)n Simple_repeat Simple_repeat 3 34 0 5 737 239 93 23 0 chr3R 20042116 20042159 -7862894 + (ATG)n Simple_repeat Simple_repeat 3 46 0 5 737 189 171 0 0 chr3R 20042608 20042643 -7862410 + (TGG)n Simple_repeat Simple_repeat 1 35 0 5 737 258 81 0 0 chr3R 20044556 20044593 -7860460 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 737 21 0 0 0 chr3R 20046492 20046513 -7858540 + AT_rich Low_complexity Low_complexity 1 21 0 5 737 215 125 41 20 chr3R 20047413 20047462 -7857591 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 737 22 70 0 0 chr3R 20049213 20049256 -7855797 + AT_rich Low_complexity Low_complexity 1 43 0 5 737 283 279 0 26 chr3R 20049546 20049660 -7855393 + (TCG)n Simple_repeat Simple_repeat 1 111 0 5 737 286 139 27 82 chr3R 20051131 20051241 -7853812 - ROO_I LTR Pao -7522 734 631 5 738 35 41 0 0 chr3R 20054030 20054079 -7850974 + AT_rich Low_complexity Low_complexity 1 49 0 5 738 228 111 0 0 chr3R 20057086 20057122 -7847931 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 738 21 36 0 0 chr3R 20060321 20060349 -7844704 + AT_rich Low_complexity Low_complexity 1 28 0 5 738 229 312 0 0 chr3R 20061577 20061673 -7843380 + GA-rich Low_complexity Low_complexity 2 97 0 5 738 201 231 0 0 chr3R 20061759 20061811 -7843242 + (CGA)n Simple_repeat Simple_repeat 2 53 0 5 738 576 130 0 0 chr3R 20064534 20064626 -7840427 + (CAG)n Simple_repeat Simple_repeat 3 94 0 5 738 315 130 0 0 chr3R 20065367 20065421 -7839632 + (CAG)n Simple_repeat Simple_repeat 2 55 0 5 738 229 273 0 35 chr3R 20065537 20065651 -7839402 + (CAG)n Simple_repeat Simple_repeat 3 112 0 5 738 263 374 0 0 chr3R 20066227 20066419 -7838634 + (CGA)n Simple_repeat Simple_repeat 1 192 0 5 738 25 0 0 0 chr3R 20068342 20068367 -7836686 + AT_rich Low_complexity Low_complexity 1 25 0 5 738 207 139 0 0 chr3R 20069713 20069749 -7835304 + (GAA)n Simple_repeat Simple_repeat 2 37 0 5 738 211 128 0 25 chr3R 20071675 20071715 -7833338 + (CAG)n Simple_repeat Simple_repeat 3 41 0 5 738 366 308 0 19 chr3R 20071777 20071936 -7833117 + (CAG)n Simple_repeat Simple_repeat 1 156 0 5 738 332 282 8 8 chr3R 20073219 20073351 -7831702 + (CAG)n Simple_repeat Simple_repeat 3 134 0 5 738 25 51 0 0 chr3R 20074202 20074241 -7830812 + AT_rich Low_complexity Low_complexity 1 39 0 5 738 187 212 24 0 chr3R 20074315 20074400 -7830653 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 738 21 36 0 0 chr3R 20074522 20074550 -7830503 + AT_rich Low_complexity Low_complexity 1 28 0 5 738 31 0 0 0 chr3R 20075899 20075930 -7829123 + AT_rich Low_complexity Low_complexity 1 31 0 5 738 183 100 0 0 chr3R 20076032 20076062 -7828991 + (TTA)n Simple_repeat Simple_repeat 2 31 0 5 738 32 43 0 0 chr3R 20078600 20078646 -7826407 + AT_rich Low_complexity Low_complexity 1 46 0 5 738 35 24 0 0 chr3R 20080503 20080545 -7824508 + AT_rich Low_complexity Low_complexity 1 42 0 5 738 219 88 0 0 chr3R 20085210 20085244 -7819809 + (GTGTG)n Simple_repeat Simple_repeat 5 38 0 5 738 204 97 0 0 chr3R 20086360 20086391 -7818662 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 738 183 80 0 0 chr3R 20089361 20089386 -7815667 + (ATG)n Simple_repeat Simple_repeat 1 25 0 5 738 189 107 0 0 chr3R 20090572 20090600 -7814453 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 5 738 21 0 0 0 chr3R 20090744 20090765 -7814288 + AT_rich Low_complexity Low_complexity 1 21 0 5 738 479 92 0 0 chr3R 20105112 20105177 -7799876 + DNAREP1_DM LINE Penelope 1 65 -529 5 738 238 0 0 0 chr3R 20105175 20105202 -7799851 - DNAREP1_DM LINE Penelope -566 28 2 5 738 234 0 0 0 chr3R 20109535 20109561 -7795492 + (TCC)n Simple_repeat Simple_repeat 1 26 0 5 738 200 128 0 25 chr3R 20110339 20110379 -7794674 + (CAT)n Simple_repeat Simple_repeat 3 41 0 5 738 28 29 0 0 chr3R 20110668 20110703 -7794350 + AT_rich Low_complexity Low_complexity 1 35 0 5 738 228 256 35 0 chr3R 20117166 20117252 -7787801 + (TTG)n Simple_repeat Simple_repeat 3 91 0 5 738 225 270 30 0 chr3R 20121377 20121477 -7783576 + ROO_I LTR Pao 652 754 -7502 5 738 25 0 0 0 chr3R 20124574 20124599 -7780454 + AT_rich Low_complexity Low_complexity 1 25 0 5 738 26 0 0 0 chr3R 20125696 20125722 -7779331 + AT_rich Low_complexity Low_complexity 1 26 0 5 738 23 0 0 0 chr3R 20126234 20126257 -7778796 + AT_rich Low_complexity Low_complexity 1 23 0 5 738 186 71 0 0 chr3R 20126338 20126366 -7778687 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 738 189 0 0 0 chr3R 20130613 20130634 -7774419 + (ACTTG)n Simple_repeat Simple_repeat 1 21 0 5 738 204 230 16 66 chr3R 20133096 20133217 -7771836 + (CAA)n Simple_repeat Simple_repeat 1 115 0 5 738 22 70 0 0 chr3R 20133837 20133880 -7771173 + AT_rich Low_complexity Low_complexity 1 43 0 5 738 23 0 0 0 chr3R 20140275 20140298 -7764755 + AT_rich Low_complexity Low_complexity 1 23 0 5 738 203 261 0 0 chr3R 20145677 20145723 -7759330 + (CATA)n Simple_repeat Simple_repeat 1 46 0 5 738 24 32 0 0 chr3R 20150136 20150167 -7754886 + AT_rich Low_complexity Low_complexity 1 31 0 5 738 264 137 0 0 chr3R 20151704 20151755 -7753298 + (ATG)n Simple_repeat Simple_repeat 3 53 0 5 738 241 224 0 0 chr3R 20152569 20152618 -7752435 + GA-rich Low_complexity Low_complexity 2 50 0 5 738 256 169 51 0 chr3R 20152782 20152841 -7752212 + G_DM LINE Jockey 555 616 -3730 5 738 23 33 0 0 chr3R 20166433 20166463 -7738590 + AT_rich Low_complexity Low_complexity 1 30 0 5 738 21 36 0 0 chr3R 20169604 20169632 -7735421 + AT_rich Low_complexity Low_complexity 1 28 0 5 738 27 0 0 0 chr3R 20169930 20169957 -7735096 + AT_rich Low_complexity Low_complexity 1 27 0 5 738 21 0 0 0 chr3R 20170214 20170235 -7734818 + AT_rich Low_complexity Low_complexity 1 21 0 5 738 33 25 0 0 chr3R 20170288 20170328 -7734725 + AT_rich Low_complexity Low_complexity 1 40 0 5 738 23 33 0 0 chr3R 20171445 20171475 -7733578 + AT_rich Low_complexity Low_complexity 1 30 0 5 738 30 27 0 0 chr3R 20178674 20178711 -7726342 + AT_rich Low_complexity Low_complexity 1 37 0 5 739 314 327 46 18 chr3R 20186061 20186196 -7718857 + SAR_DM Satellite Satellite 541 858 -614 5 739 388 261 16 32 chr3R 20186196 20186382 -7718671 - XDMR_DM Unknown Unknown -1 359 177 5 739 41 0 0 0 chr3R 20194938 20194979 -7710074 + AT_rich Low_complexity Low_complexity 1 41 0 5 739 216 0 0 0 chr3R 20197610 20197634 -7707419 + (GGA)n Simple_repeat Simple_repeat 2 25 0 5 739 35 41 0 0 chr3R 20199745 20199794 -7705259 + AT_rich Low_complexity Low_complexity 1 49 0 5 739 221 214 0 35 chr3R 20203547 20203605 -7701448 + (CATTA)n Simple_repeat Simple_repeat 5 60 0 5 739 25 0 0 0 chr3R 20207059 20207084 -7697969 + AT_rich Low_complexity Low_complexity 1 25 0 5 739 22 0 0 0 chr3R 20210007 20210029 -7695024 + AT_rich Low_complexity Low_complexity 1 22 0 5 739 198 71 0 0 chr3R 20214387 20214415 -7690638 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 739 270 152 0 0 chr3R 20216732 20216791 -7688262 + (CCA)n Simple_repeat Simple_repeat 2 60 0 5 739 23 0 0 0 chr3R 20217751 20217774 -7687279 + AT_rich Low_complexity Low_complexity 1 23 0 5 739 26 50 0 0 chr3R 20220041 20220081 -7684972 + AT_rich Low_complexity Low_complexity 1 40 0 5 739 252 161 0 0 chr3R 20221739 20221801 -7683252 + (TG)n Simple_repeat Simple_repeat 2 63 0 5 739 273 118 0 0 chr3R 20222525 20222576 -7682477 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 739 216 97 0 0 chr3R 20223171 20223202 -7681851 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 5 739 208 280 12 47 chr3R 20226212 20226298 -7678755 + (TATATG)n Simple_repeat Simple_repeat 6 88 0 5 739 234 290 0 0 chr3R 20227260 20227329 -7677724 - ROO_I LTR Pao -7532 724 656 5 739 198 0 0 0 chr3R 20233777 20233799 -7671254 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 739 186 43 0 0 chr3R 20235197 20235220 -7669833 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 739 21 0 0 0 chr3R 20236349 20236370 -7668683 + AT_rich Low_complexity Low_complexity 1 21 0 5 739 189 74 0 0 chr3R 20238944 20238971 -7666082 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 739 241 165 94 85 chr3R 20241163 20241269 -7663784 - ARS406_DM Unknown Unknown -187 166 60 5 739 1872 280 36 38 chr3R 20241277 20243294 -7661759 + SAR_DM Satellite Satellite 1 2013 -245 5 739 213 200 0 0 chr3R 20244502 20244542 -7660511 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 739 213 108 0 0 chr3R 20247936 20247973 -7657080 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 739 23 0 0 0 chr3R 20248976 20248999 -7656054 + AT_rich Low_complexity Low_complexity 1 23 0 5 739 24 0 0 0 chr3R 20249165 20249189 -7655864 + AT_rich Low_complexity Low_complexity 1 24 0 5 739 243 0 0 0 chr3R 20250794 20250821 -7654232 + (T)n Simple_repeat Simple_repeat 1 27 0 5 739 24 0 0 0 chr3R 20253790 20253814 -7651239 + AT_rich Low_complexity Low_complexity 1 24 0 5 739 217 239 0 0 chr3R 20255537 20255583 -7649470 + (ATGGTG)n Simple_repeat Simple_repeat 3 48 0 5 739 243 0 0 0 chr3R 20256408 20256435 -7648618 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 5 739 27 0 0 0 chr3R 20257473 20257500 -7647553 + AT_rich Low_complexity Low_complexity 1 27 0 5 739 198 0 0 0 chr3R 20259655 20259677 -7645376 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 739 279 0 0 0 chr3R 20261499 20261530 -7643523 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 739 183 139 0 0 chr3R 20268176 20268212 -7636841 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 739 186 43 0 0 chr3R 20268607 20268630 -7636423 + (T)n Simple_repeat Simple_repeat 1 23 0 5 739 237 119 0 0 chr3R 20269751 20269793 -7635260 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 739 23 78 0 0 chr3R 20270539 20270590 -7634463 + AT_rich Low_complexity Low_complexity 1 51 0 5 739 24 0 0 0 chr3R 20272487 20272511 -7632542 + AT_rich Low_complexity Low_complexity 1 24 0 5 739 228 149 0 0 chr3R 20272584 20272631 -7632422 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 739 241 226 0 0 chr3R 20274507 20274560 -7630493 + GA-rich Low_complexity Low_complexity 1 53 0 5 739 213 39 0 0 chr3R 20276701 20276727 -7628326 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 739 323 164 0 0 chr3R 20277832 20277899 -7627154 - ROO_I LTR Pao -7528 728 662 5 739 234 91 0 0 chr3R 20278102 20278135 -7626918 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 739 189 107 0 0 chr3R 20278939 20278967 -7626086 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 739 267 133 0 0 chr3R 20278998 20279043 -7626010 + (GTCTG)n Simple_repeat Simple_repeat 5 49 0 5 739 180 0 0 0 chr3R 20279596 20279616 -7625437 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 739 247 209 0 0 chr3R 20279803 20279870 -7625183 - ROO_I LTR Pao -7534 722 656 5 739 195 42 0 0 chr3R 20280062 20280086 -7624967 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 739 198 71 0 0 chr3R 20280881 20280909 -7624144 + (GCTG)n Simple_repeat Simple_repeat 3 30 0 5 739 303 122 0 0 chr3R 20281127 20281176 -7623877 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 739 192 184 0 0 chr3R 20281333 20281382 -7623671 + (GCTG)n Simple_repeat Simple_repeat 3 51 0 5 739 309 197 0 0 chr3R 20281979 20282050 -7623003 + (TCTG)n Simple_repeat Simple_repeat 1 71 0 5 739 255 260 21 10 chr3R 20282719 20282816 -7622237 + T-rich Low_complexity Low_complexity 4 101 0 5 739 218 271 0 0 chr3R 20283943 20283991 -7621062 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 739 345 269 56 48 chr3R 20284637 20284887 -7620166 + XDMR_DM Unknown Unknown 108 359 -1 5 739 1314 282 27 24 chr3R 20284695 20285357 -7619696 - SAR_DM Satellite Satellite -593 879 216 5 739 419 265 11 29 chr3R 20285216 20285391 -7619662 + XDMR Unknown Unknown 1 172 -189 5 739 363 231 33 26 chr3R 20285396 20285547 -7619506 - SAR_DM Satellite Satellite -718 754 603 5 739 189 180 0 0 chr3R 20286960 20287010 -7618043 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 739 216 245 0 0 chr3R 20289325 20289374 -7615679 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 739 23 0 0 0 chr3R 20289887 20289910 -7615143 + AT_rich Low_complexity Low_complexity 1 23 0 5 739 237 83 0 0 chr3R 20290596 20290632 -7614421 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 739 225 146 0 0 chr3R 20290833 20290881 -7614172 + (TTTTTG)n Simple_repeat Simple_repeat 4 51 0 5 739 201 129 0 0 chr3R 20292911 20292942 -7612111 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 739 213 178 0 0 chr3R 20293547 20293592 -7611461 + A-rich Low_complexity Low_complexity 1 45 0 5 739 186 71 0 0 chr3R 20296641 20296669 -7608384 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 739 204 279 0 0 chr3R 20296765 20296826 -7608227 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 739 23 33 0 0 chr3R 20297208 20297238 -7607815 + AT_rich Low_complexity Low_complexity 1 30 0 5 739 22 0 0 0 chr3R 20300636 20300658 -7604395 + AT_rich Low_complexity Low_complexity 1 22 0 5 739 181 0 69 0 chr3R 20302811 20302840 -7602213 + (GGATG)n Simple_repeat Simple_repeat 5 35 0 5 739 372 88 0 0 chr3R 20303347 20303404 -7601649 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 739 189 74 0 0 chr3R 20305313 20305340 -7599713 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 5 739 34 0 0 0 chr3R 20307133 20307167 -7597886 + AT_rich Low_complexity Low_complexity 1 34 0 5 739 234 62 0 0 chr3R 20307318 20307350 -7597703 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 739 204 154 0 25 chr3R 20309454 20309494 -7595559 + (CATTC)n Simple_repeat Simple_repeat 4 42 0 5 739 201 234 0 0 chr3R 20310490 20310554 -7594499 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 740 189 107 0 0 chr3R 20318274 20318302 -7586751 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 5 740 1005 39 0 0 chr3R 20319054 20319183 -7585870 + BS LINE Jockey 4998 5126 0 5 740 258 56 0 0 chr3R 20319183 20319219 -7585834 + (A)n Simple_repeat Simple_repeat 1 36 0 5 740 24 0 0 0 chr3R 20319967 20319991 -7585062 + AT_rich Low_complexity Low_complexity 1 24 0 5 740 195 42 0 0 chr3R 20320181 20320205 -7584848 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 5 740 192 40 0 0 chr3R 20321608 20321633 -7583420 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 740 281 100 0 20 chr3R 20324882 20324933 -7580120 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 740 30 0 0 0 chr3R 20330194 20330224 -7574829 + AT_rich Low_complexity Low_complexity 1 30 0 5 740 1063 56 0 40 chr3R 20331867 20332016 -7573037 + DNAREP1_DM LINE Penelope 1 143 -451 5 740 332 111 0 0 chr3R 20332022 20332067 -7572986 + DNAREP1_DM LINE Penelope 550 594 0 5 740 205 267 0 0 chr3R 20337450 20337510 -7567543 + (CAAA)n Simple_repeat Simple_repeat 4 63 0 5 740 180 0 0 0 chr3R 20338471 20338491 -7566562 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 740 37 0 0 0 chr3R 20339223 20339260 -7565793 + AT_rich Low_complexity Low_complexity 1 37 0 5 740 205 300 0 0 chr3R 20346428 20346498 -7558555 + A-rich Low_complexity Low_complexity 1 70 0 5 740 234 62 0 0 chr3R 20346611 20346643 -7558410 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 740 180 0 0 0 chr3R 20347590 20347610 -7557443 + (CAATC)n Simple_repeat Simple_repeat 2 21 0 5 740 282 198 62 10 chr3R 20347942 20348039 -7557014 + A-rich Low_complexity Low_complexity 3 104 0 5 740 210 154 0 0 chr3R 20350794 20350833 -7554220 + A-rich Low_complexity Low_complexity 1 39 0 5 740 21 36 0 0 chr3R 20352636 20352664 -7552389 + AT_rich Low_complexity Low_complexity 1 28 0 5 740 26 0 0 0 chr3R 20356233 20356259 -7548794 + AT_rich Low_complexity Low_complexity 1 26 0 5 740 35 41 0 0 chr3R 20367451 20367500 -7537553 + AT_rich Low_complexity Low_complexity 1 49 0 5 740 231 167 20 20 chr3R 20368178 20368227 -7536826 - Ulysses_I LTR Gypsy -6033 348 300 5 740 31 58 0 0 chr3R 20370104 20370156 -7534897 + AT_rich Low_complexity Low_complexity 1 52 0 5 740 23 33 0 0 chr3R 20375496 20375526 -7529527 + AT_rich Low_complexity Low_complexity 1 30 0 5 740 186 71 0 0 chr3R 20375667 20375695 -7529358 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 740 210 71 0 0 chr3R 20379819 20379847 -7525206 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 5 740 203 184 0 0 chr3R 20379984 20380022 -7525031 + T-rich Low_complexity Low_complexity 1 38 0 5 740 22 0 0 0 chr3R 20382581 20382603 -7522450 + AT_rich Low_complexity Low_complexity 1 22 0 5 740 198 71 0 0 chr3R 20383540 20383568 -7521485 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 740 28 29 0 0 chr3R 20383600 20383635 -7521418 + AT_rich Low_complexity Low_complexity 1 35 0 5 740 28 61 0 0 chr3R 20383806 20383855 -7521198 + AT_rich Low_complexity Low_complexity 1 49 0 5 740 223 174 0 0 chr3R 20384630 20384676 -7520377 + T-rich Low_complexity Low_complexity 1 46 0 5 740 28 0 0 0 chr3R 20384734 20384762 -7520291 + AT_rich Low_complexity Low_complexity 1 28 0 5 740 180 0 0 0 chr3R 20384922 20384942 -7520111 + (TATATG)n Simple_repeat Simple_repeat 3 22 0 5 740 243 140 0 0 chr3R 20388103 20388153 -7516900 + (CTG)n Simple_repeat Simple_repeat 1 50 0 5 740 324 236 0 33 chr3R 20388327 20388419 -7516634 - ROO_I LTR Pao -7513 743 655 5 740 200 86 29 0 chr3R 20390487 20390522 -7514531 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 740 206 32 32 0 chr3R 20402432 20402463 -7502590 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 740 22 0 0 0 chr3R 20403466 20403488 -7501565 + AT_rich Low_complexity Low_complexity 1 22 0 5 740 389 244 39 13 chr3R 20406213 20406367 -7498686 - XDMR_DM Unknown Unknown -201 159 2 5 740 586 248 47 41 chr3R 20406255 20406575 -7498478 + SAR_DM Satellite Satellite 572 893 -579 5 740 233 161 17 35 chr3R 20406526 20406584 -7498469 - ARS406_DM Unknown Unknown -194 159 103 5 740 255 164 18 18 chr3R 20407994 20408050 -7497003 + (CAG)n Simple_repeat Simple_repeat 3 58 0 5 740 27 29 0 0 chr3R 20408691 20408725 -7496328 + AT_rich Low_complexity Low_complexity 1 34 0 5 740 246 136 0 0 chr3R 20410692 20410736 -7494317 + (TTC)n Simple_repeat Simple_repeat 2 45 0 5 740 198 0 0 0 chr3R 20413102 20413124 -7491929 + (CATGC)n Simple_repeat Simple_repeat 3 24 0 5 740 198 0 0 0 chr3R 20413368 20413390 -7491663 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 5 740 220 220 0 0 chr3R 20415216 20415266 -7489787 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 740 243 172 15 30 chr3R 20415333 20415421 -7489632 + (CAA)n Simple_repeat Simple_repeat 1 86 0 5 740 275 49 24 0 chr3R 20416177 20416218 -7488835 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 740 252 158 53 0 chr3R 20416540 20416597 -7488456 + ROO_I LTR Pao 667 726 -7530 5 740 234 81 0 0 chr3R 20418602 20418639 -7486414 + (T)n Simple_repeat Simple_repeat 1 37 0 5 740 180 0 0 0 chr3R 20419168 20419188 -7485865 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 740 384 111 0 0 chr3R 20419340 20419403 -7485650 + (CACTC)n Simple_repeat Simple_repeat 2 64 0 5 740 180 77 0 0 chr3R 20420292 20420318 -7484735 + (ATG)n Simple_repeat Simple_repeat 2 27 0 5 740 1682 0 5 0 chr3R 20420411 20420596 -7484457 + POGON1 DNA Pogo 1 186 0 5 740 1131 52 0 0 chr3R 20422149 20422304 -7482749 + (TAGA)n Simple_repeat Simple_repeat 3 157 0 5 740 210 156 0 0 chr3R 20422446 20422491 -7482562 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 740 180 111 0 0 chr3R 20423350 20423377 -7481676 + (TTGG)n Simple_repeat Simple_repeat 4 30 0 5 740 240 86 0 0 chr3R 20426404 20426439 -7478614 + (CATA)n Simple_repeat Simple_repeat 2 36 0 5 740 195 146 0 0 chr3R 20427518 20427559 -7477494 + (CCCA)n Simple_repeat Simple_repeat 2 42 0 5 740 312 27 0 0 chr3R 20427848 20427885 -7477168 + (TAG)n Simple_repeat Simple_repeat 3 39 0 5 740 199 68 67 22 chr3R 20428431 20428476 -7476577 + (CAAAC)n Simple_repeat Simple_repeat 5 51 0 5 740 195 42 0 0 chr3R 20431093 20431117 -7473936 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 5 740 471 15 0 42 chr3R 20431297 20431368 -7473685 + (CATA)n Simple_repeat Simple_repeat 1 68 0 5 740 242 160 0 0 chr3R 20433165 20433215 -7471838 + ROO_I LTR Pao 689 738 -7518 5 740 207 182 0 0 chr3R 20435393 20435426 -7469627 + (CACCAT)n Simple_repeat Simple_repeat 2 34 0 5 740 201 234 0 0 chr3R 20435484 20435531 -7469522 + (CAGC)n Simple_repeat Simple_repeat 4 50 0 5 740 227 208 0 0 chr3R 20435661 20435709 -7469344 + T-rich Low_complexity Low_complexity 1 48 0 5 740 246 62 0 0 chr3R 20438050 20438082 -7466971 + (AACTG)n Simple_repeat Simple_repeat 4 35 0 5 740 36 0 0 0 chr3R 20439340 20439376 -7465677 + AT_rich Low_complexity Low_complexity 1 36 0 5 740 255 152 0 0 chr3R 20440073 20440119 -7464934 + T-rich Low_complexity Low_complexity 1 46 0 5 740 183 42 0 0 chr3R 20440940 20440964 -7464089 + (CACTC)n Simple_repeat Simple_repeat 3 26 0 5 740 318 115 0 0 chr3R 20442052 20442104 -7462949 + (CAG)n Simple_repeat Simple_repeat 1 52 0 5 740 229 128 0 133 chr3R 20444815 20444905 -7460148 + ROO_I LTR Pao 651 728 -7528 5 740 240 293 0 0 chr3R 20445023 20445098 -7459955 + (CAG)n Simple_repeat Simple_repeat 3 77 0 5 740 384 286 5 53 chr3R 20445567 20445755 -7459298 + (CAG)n Simple_repeat Simple_repeat 1 179 0 5 740 186 43 0 0 chr3R 20446009 20446032 -7459021 + (A)n Simple_repeat Simple_repeat 1 23 0 5 740 219 171 24 0 chr3R 20447002 20447043 -7458010 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 741 200 350 0 0 chr3R 20450488 20450591 -7454462 + (TCG)n Simple_repeat Simple_repeat 3 105 0 5 741 240 111 0 0 chr3R 20459497 20459533 -7445520 + (CAA)n Simple_repeat Simple_repeat 1 36 0 5 741 23 33 0 0 chr3R 20460208 20460238 -7444815 + AT_rich Low_complexity Low_complexity 1 30 0 5 741 233 262 0 35 chr3R 20463998 20464085 -7440968 - ROO_I LTR Pao -7530 726 643 5 741 316 219 0 0 chr3R 20464118 20464200 -7440853 - ROO_I LTR Pao -7530 726 645 5 741 192 125 0 0 chr3R 20472691 20472723 -7432330 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 741 32 26 0 0 chr3R 20474139 20474178 -7430875 + AT_rich Low_complexity Low_complexity 1 39 0 5 741 213 39 0 0 chr3R 20477038 20477064 -7427989 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 741 201 225 0 0 chr3R 20477083 20477123 -7427930 + (CGGGG)n Simple_repeat Simple_repeat 4 43 0 5 741 25 31 0 0 chr3R 20485121 20485153 -7419900 + AT_rich Low_complexity Low_complexity 1 32 0 5 741 22 35 0 0 chr3R 20485211 20485240 -7419813 + AT_rich Low_complexity Low_complexity 1 29 0 5 741 23 0 0 0 chr3R 20487693 20487716 -7417337 + AT_rich Low_complexity Low_complexity 1 23 0 5 741 210 71 0 0 chr3R 20488016 20488044 -7417009 + (CACCAT)n Simple_repeat Simple_repeat 1 28 0 5 741 25 31 0 0 chr3R 20489876 20489908 -7415145 + AT_rich Low_complexity Low_complexity 1 32 0 5 741 209 33 33 0 chr3R 20490958 20490988 -7414065 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 5 741 181 0 69 0 chr3R 20493979 20494008 -7411045 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 741 36 40 0 0 chr3R 20497247 20497297 -7407756 + AT_rich Low_complexity Low_complexity 1 50 0 5 741 261 183 0 62 chr3R 20499725 20499789 -7405264 + CT-rich Low_complexity Low_complexity 3 62 0 5 741 197 83 0 27 chr3R 20501050 20501087 -7403966 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 741 216 67 0 0 chr3R 20501551 20501581 -7403472 + (A)n Simple_repeat Simple_repeat 1 30 0 5 741 207 0 0 0 chr3R 20503281 20503304 -7401749 + (A)n Simple_repeat Simple_repeat 1 23 0 5 741 22 0 0 0 chr3R 20503693 20503715 -7401338 + AT_rich Low_complexity Low_complexity 1 22 0 5 741 201 113 62 46 chr3R 20508537 20508602 -7396451 + (CAATC)n Simple_repeat Simple_repeat 5 70 0 5 741 209 59 59 0 chr3R 20508741 20508775 -7396278 + (CAAT)n Simple_repeat Simple_repeat 3 38 0 5 741 183 42 0 0 chr3R 20508825 20508849 -7396204 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5 741 216 184 0 0 chr3R 20509829 20509878 -7395175 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 741 279 0 0 0 chr3R 20509925 20509956 -7395097 + (TAA)n Simple_repeat Simple_repeat 2 32 0 5 741 184 111 22 22 chr3R 20512507 20512553 -7392500 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 741 204 40 0 0 chr3R 20512725 20512750 -7392303 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 741 240 200 0 0 chr3R 20513668 20513748 -7391305 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 741 28 0 0 0 chr3R 20514470 20514498 -7390555 + AT_rich Low_complexity Low_complexity 1 28 0 5 741 419 128 12 0 chr3R 20518728 20518814 -7386239 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 741 195 69 0 0 chr3R 20519634 20519663 -7385390 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 741 240 59 0 0 chr3R 20519688 20519722 -7385331 + (CTA)n Simple_repeat Simple_repeat 2 35 0 5 741 203 114 23 0 chr3R 20520483 20520527 -7384526 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 741 21 0 0 0 chr3R 20521035 20521056 -7383997 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 21 0 0 0 chr3R 20521492 20521513 -7383540 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 23 0 0 0 chr3R 20524832 20524855 -7380198 + AT_rich Low_complexity Low_complexity 1 23 0 5 741 368 91 15 0 chr3R 20525168 20525234 -7379819 + (TC)n Simple_repeat Simple_repeat 1 67 0 5 741 182 171 24 0 chr3R 20526001 20526042 -7379011 + (TATCG)n Simple_repeat Simple_repeat 4 45 0 5 741 189 121 0 0 chr3R 20528911 20528944 -7376109 + (CGG)n Simple_repeat Simple_repeat 1 33 0 5 741 194 62 31 0 chr3R 20529061 20529093 -7375960 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 741 209 214 0 0 chr3R 20529486 20529528 -7375525 + (CTCA)n Simple_repeat Simple_repeat 2 43 0 5 741 273 204 0 0 chr3R 20529928 20529982 -7375071 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 741 23 54 0 0 chr3R 20530582 20530619 -7374434 + AT_rich Low_complexity Low_complexity 1 37 0 5 741 207 0 0 0 chr3R 20531184 20531207 -7373846 + (CGAAT)n Simple_repeat Simple_repeat 4 26 0 5 741 29 28 0 0 chr3R 20533757 20533793 -7371260 + AT_rich Low_complexity Low_complexity 1 36 0 5 741 669 24 0 0 chr3R 20535755 20535837 -7369216 + DM412B_LTR LTR Gypsy 483 564 -7 5 741 23 0 0 0 chr3R 20535892 20535915 -7369138 + AT_rich Low_complexity Low_complexity 1 23 0 5 741 264 111 0 0 chr3R 20536045 20536090 -7368963 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 741 21 0 0 0 chr3R 20536804 20536825 -7368228 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 26 30 0 0 chr3R 20537315 20537348 -7367705 + AT_rich Low_complexity Low_complexity 1 33 0 5 741 28 0 0 0 chr3R 20538334 20538362 -7366691 + AT_rich Low_complexity Low_complexity 1 28 0 5 741 219 266 0 0 chr3R 20542400 20542479 -7362574 + (CAG)n Simple_repeat Simple_repeat 2 80 0 5 741 227 181 0 98 chr3R 20542504 20542596 -7362457 + ROO_I LTR Pao 662 744 -7512 5 741 319 141 13 13 chr3R 20542611 20542690 -7362363 + (CAG)n Simple_repeat Simple_repeat 3 81 0 5 741 22 0 0 0 chr3R 20543477 20543499 -7361554 + AT_rich Low_complexity Low_complexity 1 22 0 5 741 496 314 4 4 chr3R 20546301 20546573 -7358480 + (CTG)n Simple_repeat Simple_repeat 1 272 0 5 741 21 0 0 0 chr3R 20548371 20548392 -7356661 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 183 80 0 0 chr3R 20550246 20550271 -7354782 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 5 741 324 102 0 0 chr3R 20551927 20551976 -7353077 + (CCA)n Simple_repeat Simple_repeat 3 51 0 5 741 26 0 0 0 chr3R 20553135 20553161 -7351892 + AT_rich Low_complexity Low_complexity 1 26 0 5 741 21 57 0 0 chr3R 20555324 20555359 -7349694 + AT_rich Low_complexity Low_complexity 1 35 0 5 741 21277 0 0 1 chr3R 20555876 20558187 -7346866 - DOC LINE Jockey 0 4725 2417 5 741 198 0 0 0 chr3R 20558244 20558266 -7346787 + (A)n Simple_repeat Simple_repeat 1 22 0 5 741 213 39 0 0 chr3R 20558602 20558628 -7346425 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 741 207 196 20 0 chr3R 20559109 20559160 -7345893 + (CGG)n Simple_repeat Simple_repeat 1 52 0 5 741 186 143 0 0 chr3R 20559182 20559217 -7345836 + (GAGTG)n Simple_repeat Simple_repeat 1 35 0 5 741 210 264 0 0 chr3R 20560705 20560758 -7344295 + (CATA)n Simple_repeat Simple_repeat 4 56 0 5 741 183 156 0 0 chr3R 20563447 20563479 -7341574 + (CACCAT)n Simple_repeat Simple_repeat 6 37 0 5 741 232 241 0 0 chr3R 20570213 20570271 -7334782 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 742 213 39 0 0 chr3R 20587530 20587556 -7317497 + (CTG)n Simple_repeat Simple_repeat 3 28 0 5 742 21 36 0 0 chr3R 20592569 20592597 -7312456 + AT_rich Low_complexity Low_complexity 1 28 0 5 742 236 288 0 12 chr3R 20593706 20593787 -7311266 + CT-rich Low_complexity Low_complexity 2 81 0 5 742 231 103 0 0 chr3R 20593871 20593910 -7311143 + (TTC)n Simple_repeat Simple_repeat 3 41 0 5 742 183 100 0 0 chr3R 20594269 20594299 -7310754 + (TTG)n Simple_repeat Simple_repeat 1 30 0 5 742 192 77 0 0 chr3R 20595439 20595465 -7309588 + (CAG)n Simple_repeat Simple_repeat 2 27 0 5 742 192 77 0 0 chr3R 20595512 20595538 -7309515 + (CGGGG)n Simple_repeat Simple_repeat 4 29 0 5 742 180 77 0 0 chr3R 20595989 20596015 -7309038 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 5 742 22 0 0 0 chr3R 20599248 20599270 -7305783 + AT_rich Low_complexity Low_complexity 1 22 0 5 742 22 0 0 0 chr3R 20600051 20600073 -7304980 + AT_rich Low_complexity Low_complexity 1 22 0 5 742 192 40 0 0 chr3R 20600408 20600433 -7304620 + (A)n Simple_repeat Simple_repeat 1 25 0 5 742 34 55 0 0 chr3R 20602150 20602205 -7302848 + AT_rich Low_complexity Low_complexity 1 55 0 5 742 252 100 0 0 chr3R 20603356 20603396 -7301657 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 742 216 86 0 0 chr3R 20616295 20616330 -7288723 + (CATAC)n Simple_repeat Simple_repeat 2 36 0 5 742 240 111 0 0 chr3R 20619128 20619164 -7285889 + (CACCAT)n Simple_repeat Simple_repeat 3 38 0 5 742 27 49 0 0 chr3R 20620258 20620299 -7284754 + AT_rich Low_complexity Low_complexity 1 41 0 5 742 480 132 0 0 chr3R 20621945 20622028 -7283025 + (CAG)n Simple_repeat Simple_repeat 1 83 0 5 742 29 28 0 0 chr3R 20624454 20624490 -7280563 + AT_rich Low_complexity Low_complexity 1 36 0 5 742 242 161 18 18 chr3R 20626077 20626134 -7278919 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 742 22 70 0 0 chr3R 20629894 20629937 -7275116 + AT_rich Low_complexity Low_complexity 1 43 0 5 742 21 0 0 0 chr3R 20636607 20636628 -7268425 + AT_rich Low_complexity Low_complexity 1 21 0 5 742 21 57 0 0 chr3R 20638688 20638723 -7266330 + AT_rich Low_complexity Low_complexity 1 35 0 5 742 26 50 0 0 chr3R 20642949 20642989 -7262064 + AT_rich Low_complexity Low_complexity 1 40 0 5 742 291 100 0 0 chr3R 20651760 20651800 -7253253 + DNAREP1_DM LINE Penelope 21 60 -534 5 742 959 160 149 37 chr3R 20651836 20652050 -7253003 + DNAREP1_DM LINE Penelope 357 594 0 5 742 21 0 0 0 chr3R 20655883 20655904 -7249149 + AT_rich Low_complexity Low_complexity 1 21 0 5 742 23 33 0 0 chr3R 20664074 20664104 -7240949 + AT_rich Low_complexity Low_complexity 1 30 0 5 742 234 0 0 0 chr3R 20666053 20666079 -7238974 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 742 21 0 0 0 chr3R 20669731 20669752 -7235301 + AT_rich Low_complexity Low_complexity 1 21 0 5 742 183 42 0 0 chr3R 20672403 20672427 -7232626 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 5 742 192 77 0 0 chr3R 20672567 20672593 -7232460 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 742 36 91 0 0 chr3R 20677121 20677220 -7227833 + AT_rich Low_complexity Low_complexity 1 99 0 5 742 21 36 0 0 chr3R 20680554 20680582 -7224471 + AT_rich Low_complexity Low_complexity 1 28 0 5 742 26 30 0 0 chr3R 20690771 20690804 -7214249 + AT_rich Low_complexity Low_complexity 1 33 0 5 742 192 125 0 0 chr3R 20692275 20692307 -7212746 + (TGG)n Simple_repeat Simple_repeat 2 33 0 5 742 25 0 0 0 chr3R 20694328 20694353 -7210700 + AT_rich Low_complexity Low_complexity 1 25 0 5 742 25 0 0 0 chr3R 20696817 20696842 -7208211 + AT_rich Low_complexity Low_complexity 1 25 0 5 742 22 0 0 0 chr3R 20696993 20697015 -7208038 + AT_rich Low_complexity Low_complexity 1 22 0 5 742 257 0 30 0 chr3R 20697098 20697131 -7207922 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 742 244 164 15 15 chr3R 20701839 20701907 -7203146 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 742 180 163 0 0 chr3R 20702098 20702141 -7202912 + (TTG)n Simple_repeat Simple_repeat 3 45 0 5 742 38 39 0 0 chr3R 20702475 20702527 -7202526 + AT_rich Low_complexity Low_complexity 1 52 0 5 743 38 0 0 0 chr3R 20714662 20714700 -7190353 + AT_rich Low_complexity Low_complexity 1 38 0 5 743 231 88 0 0 chr3R 20715535 20715569 -7189484 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 5 743 231 36 0 0 chr3R 20717441 20717469 -7187584 + (CAT)n Simple_repeat Simple_repeat 3 30 0 5 743 203 32 65 0 chr3R 20719656 20719687 -7185366 + (CAGAA)n Simple_repeat Simple_repeat 3 35 0 5 743 204 97 0 0 chr3R 20720008 20720039 -7185014 + (T)n Simple_repeat Simple_repeat 1 31 0 5 743 22 70 0 0 chr3R 20721077 20721120 -7183933 + AT_rich Low_complexity Low_complexity 1 43 0 5 743 21 0 0 0 chr3R 20723116 20723137 -7181916 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 21 0 0 0 chr3R 20723295 20723316 -7181737 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 282 218 13 13 chr3R 20724010 20724089 -7180964 + (TGG)n Simple_repeat Simple_repeat 2 80 0 5 743 186 43 0 0 chr3R 20724093 20724116 -7180937 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 743 230 273 11 22 chr3R 20725589 20725679 -7179374 + (TTG)n Simple_repeat Simple_repeat 3 91 0 5 743 180 0 0 0 chr3R 20729938 20729958 -7175095 + (A)n Simple_repeat Simple_repeat 1 20 0 5 743 25 0 0 0 chr3R 20730788 20730813 -7174240 + AT_rich Low_complexity Low_complexity 1 25 0 5 743 23 54 0 0 chr3R 20730914 20730951 -7174102 + AT_rich Low_complexity Low_complexity 1 37 0 5 743 25 0 0 0 chr3R 20730978 20731003 -7174050 + AT_rich Low_complexity Low_complexity 1 25 0 5 743 251 220 0 0 chr3R 20731279 20731338 -7173715 + T-rich Low_complexity Low_complexity 1 59 0 5 743 21 0 0 0 chr3R 20734780 20734801 -7170252 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 31 0 0 0 chr3R 20735343 20735374 -7169679 + AT_rich Low_complexity Low_complexity 1 31 0 5 743 21 0 0 0 chr3R 20736030 20736051 -7169002 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 314 80 20 0 chr3R 20736663 20736713 -7168340 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 743 195 42 0 0 chr3R 20737759 20737783 -7167270 + (GCTG)n Simple_repeat Simple_repeat 3 26 0 5 743 28 29 0 0 chr3R 20743695 20743730 -7161323 + AT_rich Low_complexity Low_complexity 1 35 0 5 743 41492 1 0 0 chr3R 20752907 20757632 -7147421 + DOC LINE Jockey 2 4725 0 5 743 23 33 0 0 chr3R 20760592 20760622 -7144431 + AT_rich Low_complexity Low_complexity 1 30 0 5 743 192 40 0 0 chr3R 20760905 20760930 -7144123 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 743 239 254 14 0 chr3R 20763917 20763988 -7141065 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 743 237 167 0 0 chr3R 20765252 20765306 -7139747 + (CTG)n Simple_repeat Simple_repeat 1 54 0 5 743 22 35 0 0 chr3R 20768441 20768470 -7136583 + AT_rich Low_complexity Low_complexity 1 29 0 5 743 23 0 0 0 chr3R 20769537 20769560 -7135493 + AT_rich Low_complexity Low_complexity 1 23 0 5 743 202 205 0 0 chr3R 20770196 20770235 -7134818 + (TCG)n Simple_repeat Simple_repeat 1 39 0 5 743 200 167 42 0 chr3R 20770382 20770430 -7134623 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 743 374 116 0 59 chr3R 20780566 20780667 -7124386 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 5 743 426 274 35 46 chr3R 20790738 20790983 -7114070 + SAR_DM Satellite Satellite 1 242 -684 5 743 229 255 62 67 chr3R 20790855 20791065 -7113988 - XDMR_DM Unknown Unknown -10 350 142 5 743 289 307 51 41 chr3R 20791056 20791372 -7113681 + SAR_DM Satellite Satellite 584 902 -570 5 743 264 170 0 0 chr3R 20796055 20796108 -7108945 + (CCCGAA)n Simple_repeat Simple_repeat 1 53 0 5 743 180 0 0 0 chr3R 20796343 20796363 -7108690 + (CTG)n Simple_repeat Simple_repeat 2 21 0 5 743 273 57 0 0 chr3R 20797596 20797631 -7107422 + (GGA)n Simple_repeat Simple_repeat 2 36 0 5 743 211 227 15 15 chr3R 20798312 20798379 -7106674 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 743 21 36 0 0 chr3R 20798636 20798664 -7106389 + AT_rich Low_complexity Low_complexity 1 28 0 5 743 186 167 0 0 chr3R 20801267 20801303 -7103750 + (ACTG)n Simple_repeat Simple_repeat 1 36 0 5 743 215 208 0 0 chr3R 20801644 20801692 -7103361 + GA-rich Low_complexity Low_complexity 4 51 0 5 743 279 146 0 0 chr3R 20802500 20802555 -7102498 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 743 195 69 0 0 chr3R 20804996 20805025 -7100028 + (A)n Simple_repeat Simple_repeat 1 29 0 5 743 348 293 17 17 chr3R 20809341 20809518 -7095535 + (CAA)n Simple_repeat Simple_repeat 3 179 0 5 743 258 116 0 0 chr3R 20810749 20810792 -7094261 + (CAG)n Simple_repeat Simple_repeat 2 44 0 5 743 222 150 0 0 chr3R 20810805 20810845 -7094208 + (CAT)n Simple_repeat Simple_repeat 1 40 0 5 743 198 209 0 0 chr3R 20811050 20811093 -7093960 + T-rich Low_complexity Low_complexity 1 43 0 5 743 28 79 0 0 chr3R 20811891 20811954 -7093099 + AT_rich Low_complexity Low_complexity 1 63 0 5 743 227 114 0 22 chr3R 20815556 20815601 -7089452 + (CAAAC)n Simple_repeat Simple_repeat 2 45 0 5 743 24 0 0 0 chr3R 20816853 20816877 -7088176 + AT_rich Low_complexity Low_complexity 1 24 0 5 743 22 0 0 0 chr3R 20818891 20818913 -7086140 + AT_rich Low_complexity Low_complexity 1 22 0 5 743 219 96 0 55 chr3R 20819078 20819133 -7085920 + (CATAC)n Simple_repeat Simple_repeat 5 56 0 5 743 253 254 0 0 chr3R 20823055 20823114 -7081939 + (CAG)n Simple_repeat Simple_repeat 1 59 0 5 743 204 167 0 0 chr3R 20823644 20823692 -7081361 + (CATCG)n Simple_repeat Simple_repeat 2 49 0 5 743 225 163 0 0 chr3R 20824580 20824629 -7080424 + A-rich Low_complexity Low_complexity 1 49 0 5 743 222 91 0 0 chr3R 20825470 20825503 -7079550 + (CATCC)n Simple_repeat Simple_repeat 4 36 0 5 743 203 0 37 0 chr3R 20826250 20826277 -7078776 + (TAAAA)n Simple_repeat Simple_repeat 4 31 0 5 743 300 111 0 0 chr3R 20828054 20828099 -7076954 + (ACTG)n Simple_repeat Simple_repeat 4 48 0 5 743 189 0 0 0 chr3R 20831322 20831343 -7073710 + (TCG)n Simple_repeat Simple_repeat 2 22 0 5 743 206 135 0 26 chr3R 20833965 20834003 -7071050 + (CAGC)n Simple_repeat Simple_repeat 2 38 0 5 743 197 108 0 26 chr3R 20834613 20834651 -7070402 + (CTG)n Simple_repeat Simple_repeat 2 38 0 5 743 336 217 0 0 chr3R 20835080 20835140 -7069913 + G-rich Low_complexity Low_complexity 4 63 0 5 743 183 80 0 0 chr3R 20836112 20836137 -7068916 + (ACTG)n Simple_repeat Simple_repeat 2 26 0 5 744 186 118 0 0 chr3R 20846734 20846768 -7058285 + (CCA)n Simple_repeat Simple_repeat 2 35 0 5 744 183 218 0 0 chr3R 20847912 20847967 -7057086 + (CAGAT)n Simple_repeat Simple_repeat 4 58 0 5 744 195 129 0 0 chr3R 20847965 20847996 -7057057 + (AGTTG)n Simple_repeat Simple_repeat 5 35 0 5 744 38 0 0 0 chr3R 20848536 20848574 -7056479 + AT_rich Low_complexity Low_complexity 1 38 0 5 744 22 35 0 0 chr3R 20860067 20860096 -7044957 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 24 32 0 0 chr3R 20867324 20867355 -7037698 + AT_rich Low_complexity Low_complexity 1 31 0 5 744 23 0 0 0 chr3R 20872966 20872989 -7032064 + AT_rich Low_complexity Low_complexity 1 23 0 5 744 21 82 0 0 chr3R 20891378 20891427 -7013626 + AT_rich Low_complexity Low_complexity 1 49 0 5 744 189 0 0 0 chr3R 20902911 20902932 -7002121 + (CCTG)n Simple_repeat Simple_repeat 1 21 0 5 744 29 70 0 0 chr3R 20903765 20903822 -7001231 + AT_rich Low_complexity Low_complexity 1 57 0 5 744 23 86 0 0 chr3R 20905768 20905826 -6999227 + AT_rich Low_complexity Low_complexity 1 58 0 5 744 206 273 0 0 chr3R 20907422 20907477 -6997576 + (CCCCAG)n Simple_repeat Simple_repeat 2 56 0 5 744 236 120 20 0 chr3R 20907519 20907569 -6997484 + (CAG)n Simple_repeat Simple_repeat 2 52 0 5 744 22 0 0 0 chr3R 20907939 20907961 -6997092 + AT_rich Low_complexity Low_complexity 1 22 0 5 744 200 197 66 0 chr3R 20910429 20910490 -6994563 + (TATG)n Simple_repeat Simple_repeat 4 68 0 5 744 23 0 0 0 chr3R 20910618 20910641 -6994412 + AT_rich Low_complexity Low_complexity 1 23 0 5 744 22 70 0 0 chr3R 20911268 20911311 -6993742 + AT_rich Low_complexity Low_complexity 1 43 0 5 744 656 148 82 41 chr3R 20913162 20913381 -6991672 - Jockey2 LINE Jockey -18 3410 3183 5 744 227 217 14 42 chr3R 20913662 20913734 -6991319 + DNAREP1_DM LINE Penelope 500 569 -25 5 744 383 78 0 15 chr3R 20916691 20916756 -6988297 + (CACTC)n Simple_repeat Simple_repeat 5 68 0 5 744 207 250 0 35 chr3R 20917637 20917695 -6987358 + (CATA)n Simple_repeat Simple_repeat 4 59 0 5 744 227 51 77 0 chr3R 20917888 20917927 -6987126 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 5 744 225 0 0 0 chr3R 20918301 20918326 -6986727 + (ACCG)n Simple_repeat Simple_repeat 4 28 0 5 744 23 68 0 0 chr3R 20918682 20918726 -6986327 + AT_rich Low_complexity Low_complexity 1 44 0 5 744 30 59 0 0 chr3R 20929346 20929397 -6975656 + AT_rich Low_complexity Low_complexity 1 51 0 5 744 22 35 0 0 chr3R 20931756 20931785 -6973268 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 21 0 0 0 chr3R 20931959 20931980 -6973073 + AT_rich Low_complexity Low_complexity 1 21 0 5 744 22 35 0 0 chr3R 20933521 20933550 -6971503 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 21 36 0 0 chr3R 20934249 20934277 -6970776 + AT_rich Low_complexity Low_complexity 1 28 0 5 744 24 0 0 0 chr3R 20934463 20934487 -6970566 + AT_rich Low_complexity Low_complexity 1 24 0 5 744 21 57 0 0 chr3R 20934827 20934862 -6970191 + AT_rich Low_complexity Low_complexity 1 35 0 5 744 23 54 0 0 chr3R 20934955 20934992 -6970061 + AT_rich Low_complexity Low_complexity 1 37 0 5 744 26 0 0 0 chr3R 20936416 20936442 -6968611 + AT_rich Low_complexity Low_complexity 1 26 0 5 744 25 0 0 0 chr3R 20938547 20938572 -6966481 + AT_rich Low_complexity Low_complexity 1 25 0 5 744 22 0 0 0 chr3R 20941769 20941791 -6963262 + AT_rich Low_complexity Low_complexity 1 22 0 5 744 34 24 0 0 chr3R 20942130 20942171 -6962882 + AT_rich Low_complexity Low_complexity 1 41 0 5 744 25 31 0 0 chr3R 20942979 20943011 -6962042 + AT_rich Low_complexity Low_complexity 1 32 0 5 744 22 94 0 0 chr3R 20943041 20943105 -6961948 + AT_rich Low_complexity Low_complexity 1 64 0 5 744 29 0 0 0 chr3R 20949048 20949077 -6955976 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 24 0 0 0 chr3R 20950161 20950185 -6954868 + AT_rich Low_complexity Low_complexity 1 24 0 5 744 237 167 0 0 chr3R 20957516 20957570 -6947483 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 744 21 71 0 0 chr3R 20957988 20958030 -6947023 + AT_rich Low_complexity Low_complexity 1 42 0 5 744 328 184 0 0 chr3R 20958869 20958956 -6946097 + ROO_I LTR Pao 643 729 -7527 5 744 31 0 0 0 chr3R 20960626 20960657 -6944396 + AT_rich Low_complexity Low_complexity 1 31 0 5 744 27 0 0 0 chr3R 20961720 20961747 -6943306 + AT_rich Low_complexity Low_complexity 1 27 0 5 744 23 54 0 0 chr3R 20962354 20962391 -6942662 + AT_rich Low_complexity Low_complexity 1 37 0 5 744 25 0 0 0 chr3R 20963050 20963075 -6941978 + AT_rich Low_complexity Low_complexity 1 25 0 5 744 25 51 0 0 chr3R 20965906 20965945 -6939108 + AT_rich Low_complexity Low_complexity 1 39 0 5 744 397 255 27 41 chr3R 20968255 20968402 -6936651 - XDMR_DM Unknown Unknown -213 147 3 5 744 2740 258 29 31 chr3R 20968284 20970050 -6935003 + SAR_DM Satellite Satellite 1 1762 -203 5 745 183 80 0 0 chr3R 20972929 20972954 -6932099 + (CGGT)n Simple_repeat Simple_repeat 1 25 0 5 745 180 213 0 0 chr3R 20973356 20973417 -6931636 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 745 21 71 0 0 chr3R 20974918 20974960 -6930093 + AT_rich Low_complexity Low_complexity 1 42 0 5 745 294 73 0 0 chr3R 20976826 20976867 -6928186 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 745 22 0 0 0 chr3R 20978177 20978199 -6926854 + AT_rich Low_complexity Low_complexity 1 22 0 5 745 213 39 0 0 chr3R 20978657 20978683 -6926370 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 745 207 186 0 0 chr3R 20978708 20978751 -6926302 + (TGAG)n Simple_repeat Simple_repeat 4 46 0 5 745 219 152 0 0 chr3R 20979009 20979055 -6925998 + (GAGTG)n Simple_repeat Simple_repeat 3 48 0 5 745 243 140 0 0 chr3R 20979301 20979351 -6925702 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 745 186 133 0 0 chr3R 20979460 20979490 -6925563 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 5 745 31 0 0 0 chr3R 20981853 20981884 -6923169 + AT_rich Low_complexity Low_complexity 1 31 0 5 745 227 175 0 0 chr3R 20982743 20982783 -6922270 + (CGGTG)n Simple_repeat Simple_repeat 5 44 0 5 745 185 65 32 0 chr3R 20982932 20982963 -6922090 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 745 201 163 0 0 chr3R 20983086 20983135 -6921918 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 745 195 42 0 0 chr3R 20984609 20984633 -6920420 + (TATAG)n Simple_repeat Simple_repeat 3 26 0 5 745 195 100 0 0 chr3R 20986452 20986482 -6918571 + (CTG)n Simple_repeat Simple_repeat 2 31 0 5 745 243 61 0 0 chr3R 20986518 20986551 -6918502 + (CGAGT)n Simple_repeat Simple_repeat 2 34 0 5 745 213 108 0 0 chr3R 20987942 20987979 -6917074 + (CAG)n Simple_repeat Simple_repeat 2 38 0 5 745 363 106 0 0 chr3R 20989512 20989578 -6915475 + (CAG)n Simple_repeat Simple_repeat 3 68 0 5 745 24 0 0 0 chr3R 20990630 20990654 -6914399 + AT_rich Low_complexity Low_complexity 1 24 0 5 745 180 0 0 0 chr3R 20990901 20990921 -6914132 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 745 264 130 0 0 chr3R 20992485 20992531 -6912522 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 745 228 232 0 0 chr3R 20992614 20992670 -6912383 + (CTG)n Simple_repeat Simple_repeat 1 56 0 5 745 285 128 0 0 chr3R 20992853 20992900 -6912153 + (TCCG)n Simple_repeat Simple_repeat 2 48 0 5 745 23 68 0 0 chr3R 20993295 20993339 -6911714 + AT_rich Low_complexity Low_complexity 1 44 0 5 745 192 125 0 0 chr3R 20993644 20993676 -6911377 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 745 263 72 0 23 chr3R 20994513 20994556 -6910497 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 745 22 0 0 0 chr3R 20996155 20996177 -6908876 + AT_rich Low_complexity Low_complexity 1 22 0 5 745 195 139 0 0 chr3R 21000460 21000496 -6904557 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 745 219 88 0 0 chr3R 21005696 21005730 -6899323 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 745 180 158 0 0 chr3R 21007638 21007676 -6897377 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 745 240 100 0 0 chr3R 21009418 21009458 -6895595 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 745 187 179 0 29 chr3R 21010201 21010270 -6894783 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 745 246 220 0 0 chr3R 21010430 21010489 -6894564 + GA-rich Low_complexity Low_complexity 2 60 0 5 745 30 27 0 0 chr3R 21011271 21011308 -6893745 + AT_rich Low_complexity Low_complexity 1 37 0 5 745 23 33 0 0 chr3R 21011548 21011578 -6893475 + AT_rich Low_complexity Low_complexity 1 30 0 5 745 38 0 0 0 chr3R 21011677 21011715 -6893338 + AT_rich Low_complexity Low_complexity 1 38 0 5 745 33 43 0 0 chr3R 21012020 21012067 -6892986 + AT_rich Low_complexity Low_complexity 1 47 0 5 745 25 0 0 0 chr3R 21012159 21012184 -6892869 + AT_rich Low_complexity Low_complexity 1 25 0 5 745 189 74 0 0 chr3R 21012878 21012905 -6892148 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 745 24 0 0 0 chr3R 21013735 21013759 -6891294 + AT_rich Low_complexity Low_complexity 1 24 0 5 745 318 138 0 0 chr3R 21014293 21014351 -6890702 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 745 231 140 0 0 chr3R 21014552 21014602 -6890451 + (CTG)n Simple_repeat Simple_repeat 3 52 0 5 745 217 132 0 0 chr3R 21015900 21015938 -6889115 + (GGA)n Simple_repeat Simple_repeat 1 38 0 5 745 195 42 0 0 chr3R 21018111 21018135 -6886918 + (CATTG)n Simple_repeat Simple_repeat 2 25 0 5 745 30 89 0 0 chr3R 21018438 21018517 -6886536 + AT_rich Low_complexity Low_complexity 1 79 0 5 745 183 42 0 0 chr3R 21019650 21019674 -6885379 + (CTTTA)n Simple_repeat Simple_repeat 5 28 0 5 745 21 0 0 0 chr3R 21022491 21022512 -6882541 + AT_rich Low_complexity Low_complexity 1 21 0 5 745 28 71 0 0 chr3R 21023928 21023984 -6881069 + AT_rich Low_complexity Low_complexity 1 56 0 5 745 26 50 0 0 chr3R 21024514 21024554 -6880499 + AT_rich Low_complexity Low_complexity 1 40 0 5 745 23 0 0 0 chr3R 21041690 21041713 -6863340 + AT_rich Low_complexity Low_complexity 1 23 0 5 745 21 71 0 0 chr3R 21061484 21061526 -6843527 + AT_rich Low_complexity Low_complexity 1 42 0 5 745 32 26 0 0 chr3R 21062812 21062851 -6842202 + AT_rich Low_complexity Low_complexity 1 39 0 5 745 23 0 0 0 chr3R 21062985 21063008 -6842045 + AT_rich Low_complexity Low_complexity 1 23 0 5 745 31 0 0 0 chr3R 21063115 21063146 -6841907 + AT_rich Low_complexity Low_complexity 1 31 0 5 745 210 150 0 0 chr3R 21063162 21063202 -6841851 + (CAA)n Simple_repeat Simple_repeat 3 42 0 5 745 39 0 0 0 chr3R 21071419 21071458 -6833595 + AT_rich Low_complexity Low_complexity 1 39 0 5 745 24 0 0 0 chr3R 21072028 21072052 -6833001 + AT_rich Low_complexity Low_complexity 1 24 0 5 745 33 66 0 0 chr3R 21074767 21074828 -6830225 + AT_rich Low_complexity Low_complexity 1 61 0 5 745 228 86 0 0 chr3R 21078681 21078716 -6826337 + (CAG)n Simple_repeat Simple_repeat 2 36 0 5 745 198 150 0 0 chr3R 21086310 21086350 -6818703 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 745 201 234 0 0 chr3R 21092761 21092808 -6812245 + GA-rich Low_complexity Low_complexity 3 49 0 5 745 34 0 0 0 chr3R 21093503 21093537 -6811516 + AT_rich Low_complexity Low_complexity 1 34 0 5 745 24 77 0 0 chr3R 21098932 21098984 -6806069 + AT_rich Low_complexity Low_complexity 1 52 0 5 746 21 36 0 0 chr3R 21114606 21114634 -6790419 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 23 0 0 0 chr3R 21114823 21114846 -6790207 + AT_rich Low_complexity Low_complexity 1 23 0 5 746 21 36 0 0 chr3R 21117086 21117114 -6787939 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 21 0 0 0 chr3R 21118786 21118807 -6786246 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 32 0 0 0 chr3R 21121620 21121652 -6783401 + AT_rich Low_complexity Low_complexity 1 32 0 5 746 23 33 0 0 chr3R 21125457 21125487 -6779566 + AT_rich Low_complexity Low_complexity 1 30 0 5 746 21 0 0 0 chr3R 21128023 21128044 -6777009 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 21 36 0 0 chr3R 21128204 21128232 -6776821 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 24 0 0 0 chr3R 21131096 21131120 -6773933 + AT_rich Low_complexity Low_complexity 1 24 0 5 746 21 0 0 0 chr3R 21138937 21138958 -6766095 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 238 224 0 0 chr3R 21146050 21146108 -6758945 + DNAREP1_DM LINE Penelope 3 60 -534 5 746 40988 6 1 3 chr3R 21150133 21154660 -6750393 - DOC LINE Jockey -1 4724 209 5 746 22 35 0 0 chr3R 21157113 21157142 -6747911 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 22 35 0 0 chr3R 21157268 21157297 -6747756 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 28 0 0 0 chr3R 21157378 21157406 -6747647 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 41 66 0 0 chr3R 21158745 21158821 -6746232 + AT_rich Low_complexity Low_complexity 1 76 0 5 746 21 0 0 0 chr3R 21169471 21169492 -6735561 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 29 0 0 0 chr3R 21174412 21174441 -6730612 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 233 232 0 0 chr3R 21175215 21175271 -6729782 + T-rich Low_complexity Low_complexity 1 56 0 5 746 222 105 0 0 chr3R 21177389 21177427 -6727626 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 746 201 94 0 0 chr3R 21177748 21177780 -6727273 + (TTG)n Simple_repeat Simple_repeat 1 32 0 5 746 22 35 0 0 chr3R 21183456 21183485 -6721568 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 26 74 0 0 chr3R 21185832 21185886 -6719167 + AT_rich Low_complexity Low_complexity 1 54 0 5 746 44 20 0 0 chr3R 21201248 21201299 -6703754 + AT_rich Low_complexity Low_complexity 1 51 0 5 746 223 288 0 0 chr3R 21202551 21202610 -6702443 + G-rich Low_complexity Low_complexity 5 63 0 5 746 234 105 0 0 chr3R 21204279 21204317 -6700736 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 746 22 0 0 0 chr3R 21206381 21206403 -6698650 + AT_rich Low_complexity Low_complexity 1 22 0 5 746 210 37 0 0 chr3R 21208764 21208791 -6696262 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 746 236 137 20 0 chr3R 21212304 21212355 -6692698 + (CAGAA)n Simple_repeat Simple_repeat 3 54 0 5 746 24 0 0 0 chr3R 21214477 21214501 -6690552 + AT_rich Low_complexity Low_complexity 1 24 0 5 746 200 267 17 0 chr3R 21214623 21214683 -6690370 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 746 213 139 0 0 chr3R 21216127 21216170 -6688883 + (T)n Simple_repeat Simple_repeat 1 43 0 5 746 219 69 0 0 chr3R 21220180 21220209 -6684844 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 746 263 240 13 13 chr3R 21223101 21223177 -6681876 + (CTG)n Simple_repeat Simple_repeat 2 77 0 5 746 334 227 0 22 chr3R 21224028 21224306 -6680747 + (TTG)n Simple_repeat Simple_repeat 1 271 0 5 746 312 221 0 0 chr3R 21224314 21224391 -6680662 + (TGG)n Simple_repeat Simple_repeat 3 79 0 5 746 330 226 0 0 chr3R 21224407 21224544 -6680509 + (TGG)n Simple_repeat Simple_repeat 3 139 0 5 746 253 239 0 32 chr3R 21224594 21224780 -6680273 + (TGG)n Simple_repeat Simple_repeat 1 180 0 5 746 281 218 0 21 chr3R 21224749 21224894 -6680159 + (TTG)n Simple_repeat Simple_repeat 1 142 0 5 746 280 239 0 0 chr3R 21224902 21224973 -6680080 + (TGG)n Simple_repeat Simple_repeat 3 73 0 5 746 314 224 0 12 chr3R 21224977 21225229 -6679824 + (TTG)n Simple_repeat Simple_repeat 1 248 0 5 746 399 221 0 0 chr3R 21225229 21225387 -6679666 + (TGG)n Simple_repeat Simple_repeat 3 160 0 5 746 249 238 0 0 chr3R 21225427 21225549 -6679504 + (TGG)n Simple_repeat Simple_repeat 3 124 0 5 746 387 221 0 0 chr3R 21225583 21225741 -6679312 + (TGG)n Simple_repeat Simple_repeat 3 160 0 5 746 370 202 0 34 chr3R 21225706 21225885 -6679168 + (TTG)n Simple_repeat Simple_repeat 3 175 0 5 746 23 33 0 0 chr3R 21226845 21226875 -6678178 + AT_rich Low_complexity Low_complexity 1 30 0 5 746 375 60 0 0 chr3R 21231143 21231193 -6673860 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 747 22 0 0 0 chr3R 21239234 21239256 -6665797 + AT_rich Low_complexity Low_complexity 1 22 0 5 747 22 35 0 0 chr3R 21242746 21242775 -6662278 + AT_rich Low_complexity Low_complexity 1 29 0 5 747 24 0 0 0 chr3R 21247346 21247370 -6657683 + AT_rich Low_complexity Low_complexity 1 24 0 5 747 21 36 0 0 chr3R 21249228 21249256 -6655797 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 198 0 0 0 chr3R 21249694 21249716 -6655337 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 747 25 0 0 0 chr3R 21253539 21253564 -6651489 + AT_rich Low_complexity Low_complexity 1 25 0 5 747 203 156 0 0 chr3R 21253868 21253900 -6651153 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 747 202 200 0 0 chr3R 21254983 21255023 -6650030 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 747 21 82 0 0 chr3R 21255723 21255772 -6649281 + AT_rich Low_complexity Low_complexity 1 49 0 5 747 25 51 0 0 chr3R 21257182 21257221 -6647832 + AT_rich Low_complexity Low_complexity 1 39 0 5 747 30 0 0 0 chr3R 21257241 21257271 -6647782 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 334 137 0 0 chr3R 21257331 21257382 -6647671 - DNAREP1_DM LINE Penelope -543 51 1 5 747 240 57 29 0 chr3R 21257966 21258001 -6647052 + HOBO DNA hAT 1 36 -2980 5 747 22 0 0 0 chr3R 21258575 21258597 -6646456 + AT_rich Low_complexity Low_complexity 1 22 0 5 747 204 125 0 0 chr3R 21261310 21261342 -6643711 + (TGAG)n Simple_repeat Simple_repeat 3 34 0 5 747 21 36 0 0 chr3R 21261711 21261739 -6643314 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 183 156 0 0 chr3R 21262601 21262633 -6642420 + (CGAAT)n Simple_repeat Simple_repeat 3 34 0 5 747 186 171 0 0 chr3R 21263344 21263385 -6641668 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 5 747 26 50 0 0 chr3R 21263846 21263886 -6641167 + AT_rich Low_complexity Low_complexity 1 40 0 5 747 23 0 0 0 chr3R 21264465 21264488 -6640565 + AT_rich Low_complexity Low_complexity 1 23 0 5 747 36 0 0 0 chr3R 21264599 21264635 -6640418 + AT_rich Low_complexity Low_complexity 1 36 0 5 747 25 0 0 0 chr3R 21265348 21265373 -6639680 + AT_rich Low_complexity Low_complexity 1 25 0 5 747 195 42 0 0 chr3R 21268804 21268828 -6636225 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 747 26 0 0 0 chr3R 21271267 21271293 -6633760 + AT_rich Low_complexity Low_complexity 1 26 0 5 747 180 0 0 0 chr3R 21271665 21271685 -6633368 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 5 747 228 154 0 0 chr3R 21271769 21271833 -6633220 + (CAA)n Simple_repeat Simple_repeat 1 64 0 5 747 252 244 23 0 chr3R 21272148 21272234 -6632819 + (CTG)n Simple_repeat Simple_repeat 2 89 0 5 747 25 0 0 0 chr3R 21274517 21274542 -6630511 + AT_rich Low_complexity Low_complexity 1 25 0 5 747 222 91 0 0 chr3R 21275328 21275361 -6629692 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 747 23 33 0 0 chr3R 21275620 21275650 -6629403 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 195 69 0 0 chr3R 21276214 21276243 -6628810 + (AGTTG)n Simple_repeat Simple_repeat 2 30 0 5 747 21 0 0 0 chr3R 21276695 21276716 -6628337 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 252 0 0 0 chr3R 21280355 21280383 -6624670 + (T)n Simple_repeat Simple_repeat 1 28 0 5 747 223 163 0 0 chr3R 21282443 21282486 -6622567 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 747 226 0 59 0 chr3R 21283850 21283884 -6621169 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 5 747 21 36 0 0 chr3R 21284221 21284249 -6620804 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 39 104 0 0 chr3R 21285154 21285298 -6619755 + AT_rich Low_complexity Low_complexity 1 144 0 5 747 23 33 0 0 chr3R 21290393 21290423 -6614630 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 26 0 0 0 chr3R 21291500 21291526 -6613527 + AT_rich Low_complexity Low_complexity 1 26 0 5 747 21 0 0 0 chr3R 21292887 21292908 -6612145 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 228 209 0 0 chr3R 21293602 21293645 -6611408 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 747 24 0 0 0 chr3R 21294608 21294632 -6610421 + AT_rich Low_complexity Low_complexity 1 24 0 5 747 24 53 0 0 chr3R 21297398 21297436 -6607617 + AT_rich Low_complexity Low_complexity 1 38 0 5 747 237 125 17 35 chr3R 21298263 21298321 -6606732 + (TTG)n Simple_repeat Simple_repeat 1 57 0 5 747 203 200 0 22 chr3R 21298359 21298405 -6606648 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 747 189 0 0 0 chr3R 21307146 21307167 -6597886 + (TCC)n Simple_repeat Simple_repeat 2 22 0 5 747 36 62 0 0 chr3R 21315095 21315159 -6589894 + AT_rich Low_complexity Low_complexity 1 64 0 5 747 189 0 0 0 chr3R 21315898 21315919 -6589134 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 5 747 24 0 0 0 chr3R 21316328 21316352 -6588701 + AT_rich Low_complexity Low_complexity 1 24 0 5 747 23 0 0 0 chr3R 21316800 21316823 -6588230 + AT_rich Low_complexity Low_complexity 1 23 0 5 747 23 33 0 0 chr3R 21316841 21316871 -6588182 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 26 30 0 0 chr3R 21316947 21316980 -6588073 + AT_rich Low_complexity Low_complexity 1 33 0 5 747 25 51 0 0 chr3R 21319085 21319124 -6585929 + AT_rich Low_complexity Low_complexity 1 39 0 5 747 35 24 0 0 chr3R 21319263 21319305 -6585748 + AT_rich Low_complexity Low_complexity 1 42 0 5 747 209 226 0 16 chr3R 21319804 21319867 -6585186 + A-rich Low_complexity Low_complexity 2 63 0 5 747 485 62 0 0 chr3R 21320248 21320312 -6584741 - PROTOP DNA P -3408 1072 1009 5 747 747 87 107 0 chr3R 21320313 21320463 -6584590 - PROTOP DNA P -3773 707 541 5 747 272 133 0 0 chr3R 21320522 21320567 -6584486 - PROTOP DNA P -4431 49 5 5 747 25 75 0 0 chr3R 21320616 21320669 -6584384 + AT_rich Low_complexity Low_complexity 1 53 0 5 747 30 69 0 0 chr3R 21320744 21320802 -6584251 + AT_rich Low_complexity Low_complexity 1 58 0 5 747 2735 114 71 6 chr3R 21321021 21321515 -6583538 + S_DM DNA Tc1 1 526 -1210 5 747 25 102 0 0 chr3R 21321733 21321821 -6583232 + AT_rich Low_complexity Low_complexity 1 88 0 5 747 28 0 0 0 chr3R 21322251 21322279 -6582774 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 47 19 0 0 chr3R 21324789 21324843 -6580210 + AT_rich Low_complexity Low_complexity 1 54 0 5 747 26 30 0 0 chr3R 21324933 21324966 -6580087 + AT_rich Low_complexity Low_complexity 1 33 0 5 747 185 86 0 54 chr3R 21325307 21325344 -6579709 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 5 747 225 0 0 0 chr3R 21325581 21325606 -6579447 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 747 206 118 0 0 chr3R 21325796 21325830 -6579223 + (A)n Simple_repeat Simple_repeat 1 34 0 5 747 379 233 0 0 chr3R 21326426 21326512 -6578541 - DNAREP1_DM LINE Penelope 0 594 509 5 747 24 53 0 0 chr3R 21327576 21327614 -6577439 + AT_rich Low_complexity Low_complexity 1 38 0 5 747 186 43 0 0 chr3R 21327821 21327844 -6577209 + (CAGGA)n Simple_repeat Simple_repeat 4 26 0 5 747 30 0 0 0 chr3R 21328234 21328264 -6576789 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 22 56 0 0 chr3R 21329021 21329057 -6575996 + AT_rich Low_complexity Low_complexity 1 36 0 5 747 30 27 0 0 chr3R 21331013 21331050 -6574003 + AT_rich Low_complexity Low_complexity 1 37 0 5 747 29 0 0 0 chr3R 21331637 21331666 -6573387 + AT_rich Low_complexity Low_complexity 1 29 0 5 747 21 36 0 0 chr3R 21333934 21333962 -6571091 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 28 0 0 0 chr3R 21334128 21334156 -6570897 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 33 43 0 0 chr3R 21334730 21334777 -6570276 + AT_rich Low_complexity Low_complexity 1 47 0 5 747 27 0 0 0 chr3R 21338727 21338754 -6566299 + AT_rich Low_complexity Low_complexity 1 27 0 5 747 26 0 0 0 chr3R 21341094 21341120 -6563933 + AT_rich Low_complexity Low_complexity 1 26 0 5 747 50 51 0 0 chr3R 21341536 21341614 -6563439 + AT_rich Low_complexity Low_complexity 1 78 0 5 747 231 175 17 17 chr3R 21344548 21344606 -6560447 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 747 21 0 0 0 chr3R 21348182 21348203 -6556850 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 206 62 31 0 chr3R 21351594 21351626 -6553427 + (GCCTG)n Simple_repeat Simple_repeat 3 35 0 5 747 211 292 10 10 chr3R 21352306 21352403 -6552650 + (TA)n Simple_repeat Simple_repeat 2 98 0 5 747 207 69 0 0 chr3R 21353789 21353818 -6551235 + (CAGAC)n Simple_repeat Simple_repeat 1 29 0 5 747 32 26 0 0 chr3R 21358444 21358483 -6546570 + AT_rich Low_complexity Low_complexity 1 39 0 5 747 24 0 0 0 chr3R 21361366 21361390 -6543663 + AT_rich Low_complexity Low_complexity 1 24 0 5 748 22 70 0 0 chr3R 21365502 21365545 -6539508 + AT_rich Low_complexity Low_complexity 1 43 0 5 748 25 0 0 0 chr3R 21366190 21366215 -6538838 + AT_rich Low_complexity Low_complexity 1 25 0 5 748 207 0 0 0 chr3R 21366317 21366340 -6538713 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 748 21 0 0 0 chr3R 21366653 21366674 -6538379 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 210 167 0 0 chr3R 21367014 21367050 -6538003 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 748 22 0 0 0 chr3R 21376562 21376584 -6528469 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 23 0 0 0 chr3R 21378125 21378148 -6526905 + AT_rich Low_complexity Low_complexity 1 23 0 5 748 35 41 0 0 chr3R 21381159 21381208 -6523845 + AT_rich Low_complexity Low_complexity 1 49 0 5 748 180 0 0 0 chr3R 21382869 21382889 -6522164 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 5 748 209 157 59 0 chr3R 21382954 21383005 -6522048 + (CGAAT)n Simple_repeat Simple_repeat 4 57 0 5 748 22 0 0 0 chr3R 21384899 21384921 -6520132 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 226 270 0 0 chr3R 21385141 21385204 -6519849 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 748 203 250 33 0 chr3R 21392125 21392185 -6512868 + (CTG)n Simple_repeat Simple_repeat 3 64 0 5 748 27 49 0 0 chr3R 21393614 21393655 -6511398 + AT_rich Low_complexity Low_complexity 1 41 0 5 748 22 0 0 0 chr3R 21395608 21395630 -6509423 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 21 36 0 0 chr3R 21396674 21396702 -6508351 + AT_rich Low_complexity Low_complexity 1 28 0 5 748 21 0 0 0 chr3R 21398139 21398160 -6506893 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 231 157 0 0 chr3R 21398655 21398706 -6506347 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 748 212 175 0 0 chr3R 21400407 21400447 -6504606 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5 748 21 0 0 0 chr3R 21402754 21402775 -6502278 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 183 42 0 0 chr3R 21402958 21402982 -6502071 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 748 23 0 0 0 chr3R 21409699 21409722 -6495331 + AT_rich Low_complexity Low_complexity 1 23 0 5 748 213 219 0 0 chr3R 21412630 21412671 -6492382 + CT-rich Low_complexity Low_complexity 2 42 0 5 748 195 42 0 0 chr3R 21413681 21413705 -6491348 + (CCCTG)n Simple_repeat Simple_repeat 2 25 0 5 748 21 0 0 0 chr3R 21418818 21418839 -6486214 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 27 0 0 0 chr3R 21419992 21420019 -6485034 + AT_rich Low_complexity Low_complexity 1 27 0 5 748 200 254 15 31 chr3R 21421558 21421623 -6483430 + GA-rich Low_complexity Low_complexity 5 68 0 5 748 257 294 0 0 chr3R 21422544 21422629 -6482424 + A-rich Low_complexity Low_complexity 1 85 0 5 748 231 103 0 0 chr3R 21426091 21426130 -6478923 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5 748 186 133 0 0 chr3R 21426334 21426364 -6478689 + (CCG)n Simple_repeat Simple_repeat 2 31 0 5 748 22 0 0 0 chr3R 21428572 21428594 -6476459 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 25 0 0 0 chr3R 21428646 21428671 -6476382 + AT_rich Low_complexity Low_complexity 1 25 0 5 748 26 64 0 0 chr3R 21428795 21428842 -6476211 + AT_rich Low_complexity Low_complexity 1 47 0 5 748 23 0 0 0 chr3R 21429272 21429295 -6475758 + AT_rich Low_complexity Low_complexity 1 23 0 5 748 21 57 0 0 chr3R 21430127 21430162 -6474891 + AT_rich Low_complexity Low_complexity 1 35 0 5 748 34 55 0 0 chr3R 21431222 21431277 -6473776 + AT_rich Low_complexity Low_complexity 1 55 0 5 748 22 0 0 0 chr3R 21432981 21433003 -6472050 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 21 0 0 0 chr3R 21433053 21433074 -6471979 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 180 77 0 0 chr3R 21433518 21433544 -6471509 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 748 209 33 0 32 chr3R 21434062 21434093 -6470960 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 748 29 0 0 0 chr3R 21434781 21434810 -6470243 + AT_rich Low_complexity Low_complexity 1 29 0 5 748 996 289 63 45 chr3R 21434924 21436475 -6468578 + SAR_DM Satellite Satellite 1 1578 -406 5 748 28 0 0 0 chr3R 21436746 21436774 -6468279 + AT_rich Low_complexity Low_complexity 1 28 0 5 748 302 181 0 0 chr3R 21439777 21439871 -6465182 + ROO_I LTR Pao 639 732 -7524 5 748 243 157 0 0 chr3R 21445528 21445579 -6459474 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 748 27 0 0 0 chr3R 21447145 21447172 -6457881 + AT_rich Low_complexity Low_complexity 1 27 0 5 748 31 44 0 0 chr3R 21449646 21449691 -6455362 + AT_rich Low_complexity Low_complexity 1 45 0 5 748 25 0 0 0 chr3R 21452784 21452809 -6452244 + AT_rich Low_complexity Low_complexity 1 25 0 5 748 180 0 0 0 chr3R 21454148 21454168 -6450885 + (CAGT)n Simple_repeat Simple_repeat 1 20 0 5 748 294 173 0 0 chr3R 21461974 21462049 -6443004 + (CAGT)n Simple_repeat Simple_repeat 2 76 0 5 748 29 0 0 0 chr3R 21462990 21463019 -6442034 + AT_rich Low_complexity Low_complexity 1 29 0 5 748 213 238 0 0 chr3R 21467235 21467277 -6437776 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 5 748 213 39 0 0 chr3R 21470495 21470521 -6434532 + (GTTTG)n Simple_repeat Simple_repeat 5 30 0 5 748 21 0 0 0 chr3R 21472331 21472352 -6432701 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 21 36 0 0 chr3R 21472434 21472462 -6432591 + AT_rich Low_complexity Low_complexity 1 28 0 5 748 26 0 0 0 chr3R 21473029 21473055 -6431998 + AT_rich Low_complexity Low_complexity 1 26 0 5 748 205 146 20 20 chr3R 21473474 21473523 -6431530 + T-rich Low_complexity Low_complexity 4 52 0 5 748 30 69 0 0 chr3R 21477233 21477291 -6427762 + AT_rich Low_complexity Low_complexity 1 58 0 5 748 26 0 0 0 chr3R 21478705 21478731 -6426322 + AT_rich Low_complexity Low_complexity 1 26 0 5 748 189 0 0 0 chr3R 21478908 21478929 -6426124 + (TAATG)n Simple_repeat Simple_repeat 1 21 0 5 748 198 174 0 0 chr3R 21479025 21479071 -6425982 + (CAATC)n Simple_repeat Simple_repeat 2 47 0 5 748 210 244 0 0 chr3R 21479564 21479605 -6425448 + (CTG)n Simple_repeat Simple_repeat 2 42 0 5 748 228 200 0 0 chr3R 21480136 21480191 -6424862 + (CTG)n Simple_repeat Simple_repeat 3 57 0 5 748 26 0 0 0 chr3R 21487111 21487137 -6417916 + AT_rich Low_complexity Low_complexity 1 26 0 5 748 22 0 0 0 chr3R 21487405 21487427 -6417626 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 261 83 0 0 chr3R 21488535 21488571 -6416482 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 748 22 35 0 0 chr3R 21495450 21495479 -6409574 + AT_rich Low_complexity Low_complexity 1 29 0 5 749 27 49 0 0 chr3R 21510969 21511010 -6394043 + AT_rich Low_complexity Low_complexity 1 41 0 5 749 224 183 33 0 chr3R 21515147 21515207 -6389846 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 749 201 232 0 35 chr3R 21518136 21518194 -6386859 + (CAAAG)n Simple_repeat Simple_repeat 4 59 0 5 749 219 245 0 0 chr3R 21520806 21520855 -6384198 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 749 207 125 0 0 chr3R 21521600 21521640 -6383413 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 749 201 196 0 0 chr3R 21522324 21522370 -6382683 + (CAA)n Simple_repeat Simple_repeat 1 46 0 5 749 26 64 0 0 chr3R 21524394 21524441 -6380612 + AT_rich Low_complexity Low_complexity 1 47 0 5 749 257 159 16 0 chr3R 21525203 21525266 -6379787 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 749 189 0 0 0 chr3R 21525371 21525392 -6379661 + (TATATG)n Simple_repeat Simple_repeat 6 26 0 5 749 24 32 0 0 chr3R 21525833 21525864 -6379189 + AT_rich Low_complexity Low_complexity 1 31 0 5 749 26 0 0 0 chr3R 21526257 21526283 -6378770 + AT_rich Low_complexity Low_complexity 1 26 0 5 749 28 61 0 0 chr3R 21528470 21528519 -6376534 + AT_rich Low_complexity Low_complexity 1 49 0 5 749 318 138 0 0 chr3R 21530669 21530727 -6374326 + (ATG)n Simple_repeat Simple_repeat 3 60 0 5 749 183 42 0 0 chr3R 21530930 21530954 -6374099 + (TTCCG)n Simple_repeat Simple_repeat 2 25 0 5 749 253 204 0 0 chr3R 21536514 21536568 -6368485 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 749 195 42 0 0 chr3R 21536769 21536793 -6368260 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 749 23 0 0 0 chr3R 21536962 21536985 -6368068 + AT_rich Low_complexity Low_complexity 1 23 0 5 749 24 53 0 0 chr3R 21537165 21537203 -6367850 + AT_rich Low_complexity Low_complexity 1 38 0 5 749 21 0 0 0 chr3R 21542522 21542543 -6362510 + AT_rich Low_complexity Low_complexity 1 21 0 5 749 29 78 0 0 chr3R 21545608 21545672 -6359381 + AT_rich Low_complexity Low_complexity 1 64 0 5 749 189 74 0 0 chr3R 21549558 21549585 -6355468 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 749 222 62 0 0 chr3R 21549935 21549967 -6355086 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 749 3999 2 0 0 chr3R 21551605 21552033 -6353020 - ROO_LTR LTR Pao 0 428 1 5 749 48441 0 1 0 chr3R 21552033 21560279 -6344774 - ROO_I LTR Pao 0 8256 1 5 749 3742 2 0 0 chr3R 21560279 21560707 -6344346 - ROO_LTR LTR Pao 0 428 1 5 749 189 74 0 0 chr3R 21565225 21565252 -6339801 + (CTG)n Simple_repeat Simple_repeat 1 27 0 5 749 23 33 0 0 chr3R 21565712 21565742 -6339311 + AT_rich Low_complexity Low_complexity 1 30 0 5 749 22 0 0 0 chr3R 21567190 21567212 -6337841 + AT_rich Low_complexity Low_complexity 1 22 0 5 749 25 0 0 0 chr3R 21567535 21567560 -6337493 + AT_rich Low_complexity Low_complexity 1 25 0 5 749 255 243 13 13 chr3R 21574433 21574508 -6330545 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 749 351 96 0 0 chr3R 21575888 21575940 -6329113 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 749 204 231 0 0 chr3R 21576474 21576526 -6328527 + A-rich Low_complexity Low_complexity 1 52 0 5 749 188 34 0 33 chr3R 21578598 21578628 -6326425 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 749 21 57 0 0 chr3R 21580001 21580036 -6325017 + AT_rich Low_complexity Low_complexity 1 35 0 5 749 23 33 0 0 chr3R 21580755 21580785 -6324268 + AT_rich Low_complexity Low_complexity 1 30 0 5 749 209 217 22 0 chr3R 21582593 21582639 -6322414 + (CATA)n Simple_repeat Simple_repeat 2 48 0 5 749 33 0 0 0 chr3R 21582845 21582878 -6322175 + AT_rich Low_complexity Low_complexity 1 33 0 5 749 25 0 0 0 chr3R 21583230 21583255 -6321798 + AT_rich Low_complexity Low_complexity 1 25 0 5 749 209 189 0 0 chr3R 21588026 21588063 -6316990 + (CATA)n Simple_repeat Simple_repeat 4 40 0 5 749 29 28 0 0 chr3R 21588207 21588243 -6316810 + AT_rich Low_complexity Low_complexity 1 36 0 5 749 204 343 9 0 chr3R 21589621 21589729 -6315324 + (CAG)n Simple_repeat Simple_repeat 3 111 0 5 749 29 84 0 0 chr3R 21595403 21595474 -6309579 + AT_rich Low_complexity Low_complexity 1 71 0 5 749 21 36 0 0 chr3R 21595556 21595584 -6309469 + AT_rich Low_complexity Low_complexity 1 28 0 5 749 21 0 0 0 chr3R 21601012 21601033 -6304020 + AT_rich Low_complexity Low_complexity 1 21 0 5 749 23 33 0 0 chr3R 21603972 21604002 -6301051 + AT_rich Low_complexity Low_complexity 1 30 0 5 749 192 111 0 0 chr3R 21606374 21606410 -6298643 + (T)n Simple_repeat Simple_repeat 1 36 0 5 749 24 0 0 0 chr3R 21606945 21606969 -6298084 + AT_rich Low_complexity Low_complexity 1 24 0 5 749 330 45 0 0 chr3R 21608886 21608930 -6296123 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 749 24 0 0 0 chr3R 21611717 21611741 -6293312 + AT_rich Low_complexity Low_complexity 1 24 0 5 749 23 0 0 0 chr3R 21613098 21613121 -6291932 + AT_rich Low_complexity Low_complexity 1 23 0 5 749 216 135 0 0 chr3R 21623806 21623843 -6281210 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 749 33 56 0 0 chr3R 21624465 21624519 -6280534 + AT_rich Low_complexity Low_complexity 1 54 0 5 750 189 0 0 0 chr3R 21632825 21632846 -6272207 + (T)n Simple_repeat Simple_repeat 1 21 0 5 750 186 103 0 0 chr3R 21632890 21632919 -6272134 + (TTTCG)n Simple_repeat Simple_repeat 4 32 0 5 750 186 103 0 0 chr3R 21633859 21633888 -6271165 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 750 22 0 0 0 chr3R 21636455 21636477 -6268576 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 273 109 0 0 chr3R 21639465 21639511 -6265542 + (CATCG)n Simple_repeat Simple_repeat 5 50 0 5 750 195 42 0 0 chr3R 21642098 21642122 -6262931 + (CAG)n Simple_repeat Simple_repeat 3 26 0 5 750 27 62 0 0 chr3R 21643269 21643317 -6261736 + AT_rich Low_complexity Low_complexity 1 48 0 5 750 234 157 39 0 chr3R 21643838 21643889 -6261164 + (CAAAT)n Simple_repeat Simple_repeat 3 55 0 5 750 192 40 0 0 chr3R 21644069 21644094 -6260959 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 750 194 0 39 0 chr3R 21648408 21648434 -6256619 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 750 21 0 0 0 chr3R 21649069 21649090 -6255963 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 25 0 0 0 chr3R 21652065 21652090 -6252963 + AT_rich Low_complexity Low_complexity 1 25 0 5 750 39 0 0 0 chr3R 21656220 21656259 -6248794 + AT_rich Low_complexity Low_complexity 1 39 0 5 750 21 0 0 0 chr3R 21657083 21657104 -6247949 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 297 228 0 0 chr3R 21657405 21657484 -6247569 + (CAG)n Simple_repeat Simple_repeat 1 79 0 5 750 3766 0 0 0 chr3R 21658467 21658895 -6246158 + ROO_LTR LTR Pao 1 428 0 5 750 70402 0 0 2 chr3R 21658895 21667163 -6237890 + ROO_I LTR Pao 1 8256 0 5 750 3766 0 0 0 chr3R 21667163 21667591 -6237462 + ROO_LTR LTR Pao 1 428 0 5 750 21 36 0 0 chr3R 21669121 21669149 -6235904 + AT_rich Low_complexity Low_complexity 1 28 0 5 750 33 56 0 0 chr3R 21669401 21669455 -6235598 + AT_rich Low_complexity Low_complexity 1 54 0 5 750 22 0 0 0 chr3R 21669999 21670021 -6235032 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 217 0 61 0 chr3R 21673751 21673784 -6231269 + (TTTTTG)n Simple_repeat Simple_repeat 1 35 0 5 750 23 33 0 0 chr3R 21674216 21674246 -6230807 + AT_rich Low_complexity Low_complexity 1 30 0 5 750 21 71 0 0 chr3R 21676044 21676086 -6228967 + AT_rich Low_complexity Low_complexity 1 42 0 5 750 229 258 32 0 chr3R 21680940 21681002 -6224051 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 5 750 43 20 0 0 chr3R 21681415 21681465 -6223588 + AT_rich Low_complexity Low_complexity 1 50 0 5 750 234 150 0 0 chr3R 21682638 21682678 -6222375 + (CCG)n Simple_repeat Simple_repeat 2 41 0 5 750 183 42 0 0 chr3R 21684466 21684490 -6220563 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 5 750 22 35 0 0 chr3R 21688511 21688540 -6216513 + AT_rich Low_complexity Low_complexity 1 29 0 5 750 183 80 0 0 chr3R 21690076 21690101 -6214952 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 750 219 164 0 52 chr3R 21695764 21695822 -6209231 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 750 22 70 0 0 chr3R 21699861 21699904 -6205149 + AT_rich Low_complexity Low_complexity 1 43 0 5 750 25 0 0 0 chr3R 21704583 21704608 -6200445 + AT_rich Low_complexity Low_complexity 1 25 0 5 750 25 31 0 0 chr3R 21704997 21705029 -6200024 + AT_rich Low_complexity Low_complexity 1 32 0 5 750 22 35 0 0 chr3R 21706345 21706374 -6198679 + AT_rich Low_complexity Low_complexity 1 29 0 5 750 182 62 0 30 chr3R 21706374 21706407 -6198646 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 5 750 256 203 0 33 chr3R 21708179 21708260 -6196793 + (GAGTG)n Simple_repeat Simple_repeat 1 78 0 5 750 22 0 0 0 chr3R 21710219 21710241 -6194812 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 24 77 0 0 chr3R 21710540 21710592 -6194461 + AT_rich Low_complexity Low_complexity 1 52 0 5 750 21 0 0 0 chr3R 21712790 21712811 -6192242 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 195 100 0 0 chr3R 21714502 21714532 -6190521 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 750 251 164 36 0 chr3R 21718896 21718951 -6186102 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 5 750 216 286 0 0 chr3R 21720296 21720359 -6184694 + (CGG)n Simple_repeat Simple_repeat 2 64 0 5 750 201 94 0 0 chr3R 21720365 21720397 -6184656 + (GGA)n Simple_repeat Simple_repeat 1 32 0 5 750 183 100 0 0 chr3R 21720406 21720436 -6184617 + (CAG)n Simple_repeat Simple_repeat 3 32 0 5 750 302 241 0 0 chr3R 21720548 21720635 -6184418 + GA-rich Low_complexity Low_complexity 1 87 0 5 750 22 0 0 0 chr3R 21721036 21721058 -6183995 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 27 49 0 0 chr3R 21722155 21722196 -6182857 + AT_rich Low_complexity Low_complexity 1 41 0 5 750 23 0 0 0 chr3R 21723051 21723074 -6181979 + AT_rich Low_complexity Low_complexity 1 23 0 5 750 22 56 0 0 chr3R 21725401 21725437 -6179616 + AT_rich Low_complexity Low_complexity 1 36 0 5 750 200 86 0 28 chr3R 21727283 21727319 -6177734 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 5 750 26 64 0 0 chr3R 21728571 21728618 -6176435 + AT_rich Low_complexity Low_complexity 1 47 0 5 750 21 0 0 0 chr3R 21731031 21731052 -6174001 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 34 24 0 0 chr3R 21733048 21733089 -6171964 + AT_rich Low_complexity Low_complexity 1 41 0 5 750 23 33 0 0 chr3R 21734063 21734093 -6170960 + AT_rich Low_complexity Low_complexity 1 30 0 5 750 22 35 0 0 chr3R 21741382 21741411 -6163642 + AT_rich Low_complexity Low_complexity 1 29 0 5 750 25 31 0 0 chr3R 21742152 21742184 -6162869 + AT_rich Low_complexity Low_complexity 1 32 0 5 750 23 0 0 0 chr3R 21742918 21742941 -6162112 + AT_rich Low_complexity Low_complexity 1 23 0 5 750 30 0 0 0 chr3R 21743362 21743392 -6161661 + AT_rich Low_complexity Low_complexity 1 30 0 5 750 21 36 0 0 chr3R 21746783 21746811 -6158242 + AT_rich Low_complexity Low_complexity 1 28 0 5 750 31 26 0 0 chr3R 21747672 21747710 -6157343 + AT_rich Low_complexity Low_complexity 1 38 0 5 750 23 0 0 0 chr3R 21750319 21750342 -6154711 + AT_rich Low_complexity Low_complexity 1 23 0 5 750 30 27 0 0 chr3R 21750695 21750732 -6154321 + AT_rich Low_complexity Low_complexity 1 37 0 5 750 32 75 0 0 chr3R 21751045 21751112 -6153941 + AT_rich Low_complexity Low_complexity 1 67 0 5 750 24 0 0 0 chr3R 21752210 21752234 -6152819 + AT_rich Low_complexity Low_complexity 1 24 0 5 750 213 156 0 22 chr3R 21752698 21752744 -6152309 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 750 51 51 0 0 chr3R 21754408 21754487 -6150566 + AT_rich Low_complexity Low_complexity 1 79 0 5 751 23 0 0 0 chr3R 21764975 21764998 -6140055 + AT_rich Low_complexity Low_complexity 1 23 0 5 751 231 146 0 0 chr3R 21765546 21765587 -6139466 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 751 21 0 0 0 chr3R 21765857 21765878 -6139175 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 25 51 0 0 chr3R 21767834 21767873 -6137180 + AT_rich Low_complexity Low_complexity 1 39 0 5 751 37 0 0 0 chr3R 21771154 21771191 -6133862 + AT_rich Low_complexity Low_complexity 1 37 0 5 751 24 0 0 0 chr3R 21776490 21776514 -6128539 + AT_rich Low_complexity Low_complexity 1 24 0 5 751 21 0 0 0 chr3R 21776745 21776766 -6128287 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 23 33 0 0 chr3R 21777514 21777544 -6127509 + AT_rich Low_complexity Low_complexity 1 30 0 5 751 40 37 0 0 chr3R 21781683 21781737 -6123316 + AT_rich Low_complexity Low_complexity 1 54 0 5 751 288 169 39 0 chr3R 21781919 21781996 -6123057 - ROO_I LTR Pao -7525 731 652 5 751 21 36 0 0 chr3R 21783046 21783074 -6121979 + AT_rich Low_complexity Low_complexity 1 28 0 5 751 307 284 7 7 chr3R 21785865 21786007 -6119046 + (CAG)n Simple_repeat Simple_repeat 3 144 0 5 751 204 200 0 35 chr3R 21788490 21788547 -6116506 + A-rich Low_complexity Low_complexity 2 56 0 5 751 21 0 0 0 chr3R 21794415 21794436 -6110617 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 24 53 0 0 chr3R 21795438 21795476 -6109577 + AT_rich Low_complexity Low_complexity 1 38 0 5 751 182 37 37 0 chr3R 21795894 21795921 -6109132 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 751 236 188 0 0 chr3R 21796084 21796132 -6108921 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 751 36 53 0 0 chr3R 21796910 21796967 -6108086 + AT_rich Low_complexity Low_complexity 1 57 0 5 751 186 43 0 0 chr3R 21804865 21804888 -6100165 + (CCA)n Simple_repeat Simple_repeat 1 23 0 5 751 186 143 0 0 chr3R 21806393 21806428 -6098625 + (GGA)n Simple_repeat Simple_repeat 3 37 0 5 751 222 196 0 0 chr3R 21806587 21806633 -6098420 + GA-rich Low_complexity Low_complexity 2 47 0 5 751 192 125 0 0 chr3R 21810338 21810370 -6094683 + (GGAGAA)n Simple_repeat Simple_repeat 1 32 0 5 751 22 0 0 0 chr3R 21811810 21811832 -6093221 + AT_rich Low_complexity Low_complexity 1 22 0 5 751 204 97 0 0 chr3R 21817974 21818005 -6087048 + (CTA)n Simple_repeat Simple_repeat 3 33 0 5 751 204 97 0 0 chr3R 21820426 21820457 -6084596 + (TATG)n Simple_repeat Simple_repeat 2 32 0 5 751 27 49 0 0 chr3R 21820871 21820912 -6084141 + AT_rich Low_complexity Low_complexity 1 41 0 5 751 226 208 0 0 chr3R 21822122 21822170 -6082883 + (CTG)n Simple_repeat Simple_repeat 2 49 0 5 751 26 30 0 0 chr3R 21822880 21822913 -6082140 + AT_rich Low_complexity Low_complexity 1 33 0 5 751 42 0 0 0 chr3R 21824435 21824477 -6080576 + AT_rich Low_complexity Low_complexity 1 42 0 5 751 29 70 0 0 chr3R 21824516 21824573 -6080480 + AT_rich Low_complexity Low_complexity 1 57 0 5 751 22 0 0 0 chr3R 21826451 21826473 -6078580 + AT_rich Low_complexity Low_complexity 1 22 0 5 751 21 82 0 0 chr3R 21827624 21827673 -6077380 + AT_rich Low_complexity Low_complexity 1 49 0 5 751 216 111 0 0 chr3R 21832321 21832357 -6072696 + (TTCGG)n Simple_repeat Simple_repeat 5 40 0 5 751 21 57 0 0 chr3R 21833418 21833453 -6071600 + AT_rich Low_complexity Low_complexity 1 35 0 5 751 30 45 0 0 chr3R 21840097 21840141 -6064912 + AT_rich Low_complexity Low_complexity 1 44 0 5 751 297 200 27 0 chr3R 21842589 21842664 -6062389 - ROO_I LTR Pao -7527 729 653 5 751 222 37 0 0 chr3R 21842862 21842889 -6062164 + (CTG)n Simple_repeat Simple_repeat 1 27 0 5 751 30 59 0 0 chr3R 21845095 21845146 -6059907 + AT_rich Low_complexity Low_complexity 1 51 0 5 751 246 105 0 0 chr3R 21848167 21848205 -6056848 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 751 21 36 0 0 chr3R 21848760 21848788 -6056265 + AT_rich Low_complexity Low_complexity 1 28 0 5 751 37 23 0 0 chr3R 21848880 21848924 -6056129 + AT_rich Low_complexity Low_complexity 1 44 0 5 751 21 57 0 0 chr3R 21851748 21851783 -6053270 + AT_rich Low_complexity Low_complexity 1 35 0 5 751 27 0 0 0 chr3R 21852571 21852598 -6052455 + AT_rich Low_complexity Low_complexity 1 27 0 5 751 305 189 0 10 chr3R 21856570 21856666 -6048387 + (ACTG)n Simple_repeat Simple_repeat 4 98 0 5 751 276 111 0 0 chr3R 21858030 21858075 -6046978 + (CAG)n Simple_repeat Simple_repeat 3 47 0 5 751 204 378 0 0 chr3R 21859316 21859464 -6045589 + (CAA)n Simple_repeat Simple_repeat 2 149 0 5 751 225 119 0 0 chr3R 21860289 21860331 -6044722 + (T)n Simple_repeat Simple_repeat 1 42 0 5 751 201 176 54 0 chr3R 21866930 21867004 -6038049 + (TA)n Simple_repeat Simple_repeat 2 79 0 5 751 23 0 0 0 chr3R 21868809 21868832 -6036221 + AT_rich Low_complexity Low_complexity 1 23 0 5 751 22 56 0 0 chr3R 21870998 21871034 -6034019 + AT_rich Low_complexity Low_complexity 1 36 0 5 751 207 224 20 0 chr3R 21874404 21874453 -6030600 + (CAA)n Simple_repeat Simple_repeat 2 51 0 5 751 216 0 0 0 chr3R 21875073 21875097 -6029956 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 751 24 32 0 0 chr3R 21875442 21875473 -6029580 + AT_rich Low_complexity Low_complexity 1 31 0 5 751 32 75 0 0 chr3R 21875524 21875591 -6029462 + AT_rich Low_complexity Low_complexity 1 67 0 5 751 238 303 0 0 chr3R 21879312 21879401 -6025652 + (TGG)n Simple_repeat Simple_repeat 1 89 0 5 751 183 80 0 0 chr3R 21879785 21879810 -6025243 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 751 32 0 0 0 chr3R 21881275 21881307 -6023746 + AT_rich Low_complexity Low_complexity 1 32 0 5 751 21 0 0 0 chr3R 21881359 21881380 -6023673 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 243 152 0 0 chr3R 21888429 21888475 -6016578 + (CTG)n Simple_repeat Simple_repeat 2 47 0 5 751 21 36 0 0 chr3R 21888786 21888814 -6016239 + AT_rich Low_complexity Low_complexity 1 28 0 5 752 223 28 0 53 chr3R 21889684 21889722 -6015331 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 752 21 0 0 0 chr3R 21891916 21891937 -6013116 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 22 35 0 0 chr3R 21892702 21892731 -6012322 + AT_rich Low_complexity Low_complexity 1 29 0 5 752 258 125 0 0 chr3R 21893645 21893693 -6011360 + (T)n Simple_repeat Simple_repeat 1 48 0 5 752 225 178 0 0 chr3R 21894641 21894686 -6010367 + (TTG)n Simple_repeat Simple_repeat 2 46 0 5 752 188 35 35 0 chr3R 21897870 21897899 -6007154 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 752 200 194 0 0 chr3R 21899826 21899862 -6005191 + (TTCGGG)n Simple_repeat Simple_repeat 4 39 0 5 752 195 42 0 0 chr3R 21900002 21900026 -6005027 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 752 24 32 0 0 chr3R 21902398 21902429 -6002624 + AT_rich Low_complexity Low_complexity 1 31 0 5 752 183 80 0 0 chr3R 21904135 21904160 -6000893 + (ATGGTG)n Simple_repeat Simple_repeat 1 25 0 5 752 21 0 0 0 chr3R 21904798 21904819 -6000234 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 23 54 0 0 chr3R 21904902 21904939 -6000114 + AT_rich Low_complexity Low_complexity 1 37 0 5 752 186 133 0 0 chr3R 21908541 21908571 -5996482 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 752 201 121 0 0 chr3R 21909327 21909360 -5995693 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 752 269 177 37 25 chr3R 21909570 21909651 -5995402 - ROO_I LTR Pao -7539 717 636 5 752 247 229 0 0 chr3R 21911269 21911330 -5993723 + ROO_I LTR Pao 645 705 -7551 5 752 225 221 88 38 chr3R 21911278 21911358 -5993695 + DOC3_DM LINE Jockey 529 612 -4128 5 752 327 136 0 0 chr3R 21911491 21911550 -5993503 + (CAG)n Simple_repeat Simple_repeat 3 61 0 5 752 204 260 0 20 chr3R 21912410 21912461 -5992592 + (CAA)n Simple_repeat Simple_repeat 1 50 0 5 752 219 161 0 0 chr3R 21912948 21913004 -5992049 + A-rich Low_complexity Low_complexity 1 56 0 5 752 26 64 0 0 chr3R 21914456 21914503 -5990550 + AT_rich Low_complexity Low_complexity 1 47 0 5 752 34 0 0 0 chr3R 21916166 21916200 -5988853 + AT_rich Low_complexity Low_complexity 1 34 0 5 752 216 86 0 0 chr3R 21919240 21919275 -5985778 + (GTCTG)n Simple_repeat Simple_repeat 5 39 0 5 752 228 136 12 47 chr3R 21921930 21922015 -5983038 - ROO_I LTR Pao -7532 724 643 5 752 345 152 0 83 chr3R 21922081 21922189 -5982864 - ROO_I LTR Pao -7524 732 634 5 752 44 35 0 0 chr3R 21924600 21924658 -5980395 + AT_rich Low_complexity Low_complexity 1 58 0 5 752 28 0 0 0 chr3R 21924692 21924720 -5980333 + AT_rich Low_complexity Low_complexity 1 28 0 5 752 21 0 0 0 chr3R 21926193 21926214 -5978839 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 216 158 0 0 chr3R 21927951 21927989 -5977064 + (CGA)n Simple_repeat Simple_repeat 3 40 0 5 752 34 42 0 0 chr3R 21929594 21929642 -5975411 + AT_rich Low_complexity Low_complexity 1 48 0 5 752 225 219 31 0 chr3R 21930505 21930569 -5974484 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 752 35 24 0 0 chr3R 21932467 21932509 -5972544 + AT_rich Low_complexity Low_complexity 1 42 0 5 752 249 128 0 0 chr3R 21932765 21932812 -5972241 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 752 25 0 0 0 chr3R 21933571 21933596 -5971457 + AT_rich Low_complexity Low_complexity 1 25 0 5 752 3799 5 0 0 chr3R 21934602 21935019 -5970034 + TIRANT_LTR LTR Gypsy 1 417 0 5 752 71179 0 0 0 chr3R 21935019 21942711 -5962342 + TIRANT_I LTR Gypsy 1 7692 0 5 752 3799 5 0 0 chr3R 21942711 21943128 -5961925 + TIRANT_LTR LTR Gypsy 1 417 0 5 752 180 0 0 0 chr3R 21943172 21943192 -5961861 + (A)n Simple_repeat Simple_repeat 1 20 0 5 752 36 70 0 0 chr3R 21943637 21943708 -5961345 + AT_rich Low_complexity Low_complexity 1 71 0 5 752 212 136 0 43 chr3R 21944650 21944696 -5960357 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 752 21 36 0 0 chr3R 21947921 21947949 -5957104 + AT_rich Low_complexity Low_complexity 1 28 0 5 752 315 0 0 0 chr3R 21948223 21948258 -5956795 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5 752 24 0 0 0 chr3R 21948722 21948746 -5956307 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 23 33 0 0 chr3R 21953523 21953553 -5951500 + AT_rich Low_complexity Low_complexity 1 30 0 5 752 28 48 0 0 chr3R 21955694 21955736 -5949317 + AT_rich Low_complexity Low_complexity 1 42 0 5 752 21 0 0 0 chr3R 21957726 21957747 -5947306 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 24 0 0 0 chr3R 21963075 21963099 -5941954 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 23 33 0 0 chr3R 21973031 21973061 -5931992 + AT_rich Low_complexity Low_complexity 1 30 0 5 752 23 33 0 0 chr3R 21976088 21976118 -5928935 + AT_rich Low_complexity Low_complexity 1 30 0 5 752 303 213 0 0 chr3R 21977156 21977217 -5927836 - DNAREP1_DM LINE Penelope -533 61 1 5 752 24 32 0 0 chr3R 21982393 21982424 -5922629 + AT_rich Low_complexity Low_complexity 1 31 0 5 752 24 53 0 0 chr3R 21983572 21983610 -5921443 + AT_rich Low_complexity Low_complexity 1 38 0 5 752 25 31 0 0 chr3R 21986725 21986757 -5918296 + AT_rich Low_complexity Low_complexity 1 32 0 5 752 21 0 0 0 chr3R 21989096 21989117 -5915936 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 24 0 0 0 chr3R 21996343 21996367 -5908686 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 267 244 11 11 chr3R 22007657 22007748 -5897305 + CT-rich Low_complexity Low_complexity 1 91 0 5 752 23 0 0 0 chr3R 22017085 22017108 -5887945 + AT_rich Low_complexity Low_complexity 1 23 0 5 752 22 35 0 0 chr3R 22017804 22017833 -5887220 + AT_rich Low_complexity Low_complexity 1 29 0 5 753 25 0 0 0 chr3R 22026633 22026658 -5878395 + AT_rich Low_complexity Low_complexity 1 25 0 5 753 21 0 0 0 chr3R 22027368 22027389 -5877664 + AT_rich Low_complexity Low_complexity 1 21 0 5 753 39 0 0 0 chr3R 22030505 22030544 -5874509 + AT_rich Low_complexity Low_complexity 1 39 0 5 753 23 0 0 0 chr3R 22034632 22034655 -5870398 + AT_rich Low_complexity Low_complexity 1 23 0 5 753 31 44 0 0 chr3R 22036257 22036302 -5868751 + AT_rich Low_complexity Low_complexity 1 45 0 5 753 3614 5 7 7 chr3R 22041551 22041965 -5863088 - DM297_LTR LTR Gypsy 0 414 1 5 753 10205 8 0 0 chr3R 22041965 22043137 -5861916 - DM297_I LTR Gypsy 0 6167 4996 5 753 34763 7 0 0 chr3R 22043123 22047018 -5858035 - DM297_I LTR Gypsy -2272 3895 1 5 753 3605 5 7 7 chr3R 22047018 22047431 -5857622 - DM297_LTR LTR Gypsy 0 414 2 5 753 297 0 0 0 chr3R 22047431 22047464 -5857589 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 753 28 0 0 0 chr3R 22047558 22047586 -5857467 + AT_rich Low_complexity Low_complexity 1 28 0 5 753 22 35 0 0 chr3R 22048552 22048581 -5856472 + AT_rich Low_complexity Low_complexity 1 29 0 5 753 210 143 0 0 chr3R 22055692 22055727 -5849326 + (CAA)n Simple_repeat Simple_repeat 3 37 0 5 753 277 197 0 0 chr3R 22057887 22057958 -5847095 + ROO_I LTR Pao 662 732 -7524 5 753 183 139 0 0 chr3R 22059051 22059087 -5845966 + (A)n Simple_repeat Simple_repeat 1 36 0 5 753 24 0 0 0 chr3R 22065911 22065935 -5839118 + AT_rich Low_complexity Low_complexity 1 24 0 5 753 207 204 23 0 chr3R 22073670 22073714 -5831339 + (CAGC)n Simple_repeat Simple_repeat 2 46 0 5 753 30 27 0 0 chr3R 22073948 22073985 -5831068 + AT_rich Low_complexity Low_complexity 1 37 0 5 753 25 31 0 0 chr3R 22074094 22074126 -5830927 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 22 0 0 0 chr3R 22076366 22076388 -5828665 + AT_rich Low_complexity Low_complexity 1 22 0 5 753 24 53 0 0 chr3R 22078614 22078652 -5826401 + AT_rich Low_complexity Low_complexity 1 38 0 5 753 23 33 0 0 chr3R 22080456 22080486 -5824567 + AT_rich Low_complexity Low_complexity 1 30 0 5 753 28 29 0 0 chr3R 22081587 22081622 -5823431 + AT_rich Low_complexity Low_complexity 1 35 0 5 753 200 229 0 20 chr3R 22087166 22087215 -5817838 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 753 195 139 0 0 chr3R 22089218 22089254 -5815799 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 753 44 35 0 0 chr3R 22094036 22094094 -5810959 + AT_rich Low_complexity Low_complexity 1 58 0 5 753 25 31 0 0 chr3R 22096091 22096123 -5808930 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 223 284 0 0 chr3R 22096801 22096868 -5808185 + (TGGA)n Simple_repeat Simple_repeat 4 70 0 5 753 30 69 0 0 chr3R 22099117 22099175 -5805878 + AT_rich Low_complexity Low_complexity 1 58 0 5 753 23 86 0 0 chr3R 22102326 22102384 -5802669 + AT_rich Low_complexity Low_complexity 1 58 0 5 753 25 31 0 0 chr3R 22102738 22102770 -5802283 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 30 0 0 0 chr3R 22103699 22103729 -5801324 + AT_rich Low_complexity Low_complexity 1 30 0 5 753 22 0 0 0 chr3R 22103759 22103781 -5801272 + AT_rich Low_complexity Low_complexity 1 22 0 5 753 218 333 0 0 chr3R 22103880 22103991 -5801062 + A-rich Low_complexity Low_complexity 1 111 0 5 753 230 306 0 23 chr3R 22106115 22106202 -5798851 + (CTCA)n Simple_repeat Simple_repeat 4 88 0 5 753 32 86 0 0 chr3R 22106907 22106988 -5798065 + AT_rich Low_complexity Low_complexity 1 81 0 5 753 228 229 0 0 chr3R 22115387 22115448 -5789605 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 753 195 42 0 0 chr3R 22115829 22115853 -5789200 + (CAGTT)n Simple_repeat Simple_repeat 2 25 0 5 753 26 0 0 0 chr3R 22116652 22116678 -5788375 + AT_rich Low_complexity Low_complexity 1 26 0 5 753 198 0 0 0 chr3R 22117632 22117654 -5787399 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 753 25 31 0 0 chr3R 22119149 22119181 -5785872 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 25 51 0 0 chr3R 22126447 22126486 -5778567 + AT_rich Low_complexity Low_complexity 1 39 0 5 753 219 36 0 0 chr3R 22126787 22126815 -5778238 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 5 753 26 74 0 0 chr3R 22128884 22128938 -5776115 + AT_rich Low_complexity Low_complexity 1 54 0 5 753 21 0 0 0 chr3R 22129864 22129885 -5775168 + AT_rich Low_complexity Low_complexity 1 21 0 5 753 37 23 0 0 chr3R 22132041 22132085 -5772968 + AT_rich Low_complexity Low_complexity 1 44 0 5 753 24 77 0 0 chr3R 22143635 22143687 -5761366 + AT_rich Low_complexity Low_complexity 1 52 0 5 753 29 0 0 0 chr3R 22143723 22143752 -5761301 + AT_rich Low_complexity Low_complexity 1 29 0 5 753 21 0 0 0 chr3R 22147663 22147684 -5757369 + AT_rich Low_complexity Low_complexity 1 21 0 5 753 258 105 0 0 chr3R 22150374 22150412 -5754641 + (TCG)n Simple_repeat Simple_repeat 2 39 0 5 753 21 36 0 0 chr3R 22151069 22151097 -5753956 + AT_rich Low_complexity Low_complexity 1 28 0 5 754 220 70 23 23 chr3R 22155806 22155850 -5749203 + (CAAAC)n Simple_repeat Simple_repeat 2 45 0 5 754 22 0 0 0 chr3R 22155945 22155967 -5749086 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 228 281 0 15 chr3R 22156551 22156616 -5748437 + (CAG)n Simple_repeat Simple_repeat 2 65 0 5 754 230 286 0 0 chr3R 22156955 22157025 -5748028 + ROO_I LTR Pao 658 727 -7529 5 754 21 0 0 0 chr3R 22159140 22159161 -5745892 + AT_rich Low_complexity Low_complexity 1 21 0 5 754 26 30 0 0 chr3R 22162827 22162860 -5742193 + AT_rich Low_complexity Low_complexity 1 33 0 5 754 22 70 0 0 chr3R 22164287 22164330 -5740723 + AT_rich Low_complexity Low_complexity 1 43 0 5 754 258 169 0 0 chr3R 22165318 22165383 -5739670 + (CAGT)n Simple_repeat Simple_repeat 4 68 0 5 754 237 108 0 0 chr3R 22169553 22169590 -5735463 + (GACTG)n Simple_repeat Simple_repeat 1 37 0 5 754 28 29 0 0 chr3R 22175069 22175104 -5729949 + AT_rich Low_complexity Low_complexity 1 35 0 5 754 278 310 0 0 chr3R 22179321 22179421 -5725632 + A-rich Low_complexity Low_complexity 1 100 0 5 754 28 48 0 0 chr3R 22181261 22181303 -5723750 + AT_rich Low_complexity Low_complexity 1 42 0 5 754 26 50 0 0 chr3R 22182757 22182797 -5722256 + AT_rich Low_complexity Low_complexity 1 40 0 5 754 246 81 0 0 chr3R 22198729 22198766 -5706287 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 754 28 0 0 0 chr3R 22199269 22199297 -5705756 + AT_rich Low_complexity Low_complexity 1 28 0 5 754 3736 0 0 2 chr3R 22202101 22202530 -5702523 - ROO_LTR LTR Pao 0 428 1 5 754 70307 1 1 0 chr3R 22202530 22210774 -5694279 - ROO_I LTR Pao 0 8256 1 5 754 3736 0 0 2 chr3R 22210774 22211203 -5693850 - ROO_LTR LTR Pao 0 428 1 5 754 26 30 0 0 chr3R 22213671 22213704 -5691349 + AT_rich Low_complexity Low_complexity 1 33 0 5 754 23 68 0 0 chr3R 22217687 22217731 -5687322 + AT_rich Low_complexity Low_complexity 1 44 0 5 754 21 0 0 0 chr3R 22219008 22219029 -5686024 + AT_rich Low_complexity Low_complexity 1 21 0 5 754 38 22 0 0 chr3R 22221130 22221175 -5683878 + AT_rich Low_complexity Low_complexity 1 45 0 5 754 22 0 0 0 chr3R 22221751 22221773 -5683280 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 25 51 0 0 chr3R 22223222 22223261 -5681792 + AT_rich Low_complexity Low_complexity 1 39 0 5 754 201 132 0 0 chr3R 22225741 22225779 -5679274 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 754 208 121 0 0 chr3R 22226276 22226309 -5678744 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 5 754 25 0 0 0 chr3R 22227292 22227317 -5677736 + AT_rich Low_complexity Low_complexity 1 25 0 5 754 198 0 0 0 chr3R 22228690 22228712 -5676341 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 5 754 58 15 0 0 chr3R 22231667 22231732 -5673321 + AT_rich Low_complexity Low_complexity 1 65 0 5 754 236 202 25 25 chr3R 22233587 22233668 -5671385 + ROO_I LTR Pao 652 732 -7524 5 754 33 43 0 0 chr3R 22234763 22234810 -5670243 + AT_rich Low_complexity Low_complexity 1 47 0 5 754 26 50 0 0 chr3R 22235707 22235747 -5669306 + AT_rich Low_complexity Low_complexity 1 40 0 5 754 340 163 70 0 chr3R 22241478 22241564 -5663489 + ROO_I LTR Pao 641 732 -7524 5 754 21 82 0 0 chr3R 22241855 22241904 -5663149 + AT_rich Low_complexity Low_complexity 1 49 0 5 754 234 282 0 37 chr3R 22242427 22242508 -5662545 + (CTCA)n Simple_repeat Simple_repeat 1 78 0 5 754 213 94 0 0 chr3R 22244371 22244403 -5660650 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 754 21 57 0 0 chr3R 22245233 22245268 -5659785 + AT_rich Low_complexity Low_complexity 1 35 0 5 754 35 92 0 0 chr3R 22246252 22246350 -5658703 + AT_rich Low_complexity Low_complexity 1 98 0 5 754 29 28 0 0 chr3R 22249368 22249404 -5655649 + AT_rich Low_complexity Low_complexity 1 36 0 5 754 24 32 0 0 chr3R 22252323 22252354 -5652699 + AT_rich Low_complexity Low_complexity 1 31 0 5 754 194 62 0 30 chr3R 22253086 22253119 -5651934 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 754 227 143 163 0 chr3R 22253925 22253974 -5651079 - Gypsy11_I LTR Gypsy -1652 1872 1816 5 754 28 29 0 0 chr3R 22254930 22254965 -5650088 + AT_rich Low_complexity Low_complexity 1 35 0 5 754 213 94 0 0 chr3R 22257742 22257774 -5647279 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 754 186 43 0 0 chr3R 22258189 22258212 -5646841 + (CAATA)n Simple_repeat Simple_repeat 3 25 0 5 754 204 158 0 0 chr3R 22258676 22258714 -5646339 + (CAT)n Simple_repeat Simple_repeat 1 38 0 5 754 22 0 0 0 chr3R 22258781 22258803 -5646250 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 267 103 0 0 chr3R 22259552 22259591 -5645462 + (TTG)n Simple_repeat Simple_repeat 3 41 0 5 754 276 154 0 0 chr3R 22259772 22259824 -5645229 + (CCAA)n Simple_repeat Simple_repeat 1 52 0 5 754 23 33 0 0 chr3R 22260050 22260080 -5644973 + AT_rich Low_complexity Low_complexity 1 30 0 5 754 25 0 0 0 chr3R 22260398 22260423 -5644630 + AT_rich Low_complexity Low_complexity 1 25 0 5 754 244 232 14 14 chr3R 22260548 22260618 -5644435 + (CAA)n Simple_repeat Simple_repeat 2 71 0 5 754 35 54 0 0 chr3R 22261276 22261332 -5643721 + AT_rich Low_complexity Low_complexity 1 56 0 5 754 198 0 0 0 chr3R 22262617 22262639 -5642414 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 754 25 65 0 0 chr3R 22264627 22264673 -5640380 + AT_rich Low_complexity Low_complexity 1 46 0 5 754 22 0 0 0 chr3R 22265688 22265710 -5639343 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 285 109 0 0 chr3R 22266243 22266289 -5638764 + (CGATA)n Simple_repeat Simple_repeat 4 49 0 5 754 219 114 0 0 chr3R 22266381 22266416 -5638637 + (CTGTG)n Simple_repeat Simple_repeat 5 39 0 5 754 31 0 0 0 chr3R 22268023 22268054 -5636999 + AT_rich Low_complexity Low_complexity 1 31 0 5 754 248 306 0 9 chr3R 22268642 22268754 -5636299 + A-rich Low_complexity Low_complexity 3 113 0 5 754 180 0 0 0 chr3R 22271224 22271244 -5633809 + (T)n Simple_repeat Simple_repeat 1 20 0 5 754 257 296 0 0 chr3R 22271594 22271665 -5633388 + (GCTG)n Simple_repeat Simple_repeat 3 73 0 5 754 207 261 0 0 chr3R 22280616 22280681 -5624372 + (CCA)n Simple_repeat Simple_repeat 2 66 0 5 755 180 163 0 0 chr3R 22282711 22282754 -5622299 + (CCA)n Simple_repeat Simple_repeat 2 44 0 5 755 234 0 0 0 chr3R 22282757 22282783 -5622270 + (TCC)n Simple_repeat Simple_repeat 2 27 0 5 755 221 146 0 20 chr3R 22287827 22287876 -5617177 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 755 21 36 0 0 chr3R 22291966 22291994 -5613059 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 22 0 0 0 chr3R 22295705 22295727 -5609326 + AT_rich Low_complexity Low_complexity 1 22 0 5 755 207 0 0 0 chr3R 22297710 22297733 -5607320 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 755 26 30 0 0 chr3R 22297878 22297911 -5607142 + AT_rich Low_complexity Low_complexity 1 33 0 5 755 225 132 0 0 chr3R 22299115 22299153 -5605900 + (CTG)n Simple_repeat Simple_repeat 2 39 0 5 755 234 242 0 15 chr3R 22306452 22306519 -5598534 - ROO_I LTR Pao -7527 729 664 5 755 29 28 0 0 chr3R 22306921 22306957 -5598096 + AT_rich Low_complexity Low_complexity 1 36 0 5 755 203 158 0 0 chr3R 22307748 22307786 -5597267 + (GCTG)n Simple_repeat Simple_repeat 1 38 0 5 755 22 0 0 0 chr3R 22309526 22309548 -5595505 + AT_rich Low_complexity Low_complexity 1 22 0 5 755 21 0 0 0 chr3R 22310510 22310531 -5594522 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 201 74 0 0 chr3R 22313871 22313898 -5591155 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 755 281 265 10 10 chr3R 22314116 22314219 -5590834 + (CCCCAG)n Simple_repeat Simple_repeat 3 105 0 5 755 22 70 0 0 chr3R 22317592 22317635 -5587418 + AT_rich Low_complexity Low_complexity 1 43 0 5 755 213 73 0 89 chr3R 22318474 22318519 -5586534 + (TAA)n Simple_repeat Simple_repeat 2 42 0 5 755 234 116 0 0 chr3R 22319460 22319503 -5585550 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 755 201 94 0 0 chr3R 22322082 22322114 -5582939 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 755 180 111 0 0 chr3R 22322889 22322916 -5582137 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 755 227 157 0 19 chr3R 22325625 22325677 -5579376 + (CAAAC)n Simple_repeat Simple_repeat 2 52 0 5 755 207 69 0 0 chr3R 22326040 22326069 -5578984 + (CAA)n Simple_repeat Simple_repeat 1 29 0 5 755 180 111 0 0 chr3R 22326539 22326566 -5578487 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 755 22 0 0 0 chr3R 22327956 22327978 -5577075 + AT_rich Low_complexity Low_complexity 1 22 0 5 755 225 204 0 0 chr3R 22328452 22328496 -5576557 + (CAT)n Simple_repeat Simple_repeat 1 44 0 5 755 200 231 0 0 chr3R 22333155 22333194 -5571859 + A-rich Low_complexity Low_complexity 6 44 0 5 755 200 260 0 0 chr3R 22334382 22334432 -5570621 + (CCGAG)n Simple_repeat Simple_repeat 3 52 0 5 755 186 128 0 0 chr3R 22335729 22335768 -5569285 + (GACTG)n Simple_repeat Simple_repeat 5 43 0 5 755 3749 2 0 0 chr3R 22336278 22336706 -5568347 + ROO_LTR LTR Pao 1 428 0 5 755 68959 0 14 0 chr3R 22336706 22344853 -5560200 + ROO_I LTR Pao 1 8256 0 5 755 3766 0 0 0 chr3R 22344853 22345281 -5559772 + ROO_LTR LTR Pao 1 428 0 5 755 244 314 0 0 chr3R 22348195 22348297 -5556756 + A-rich Low_complexity Low_complexity 1 102 0 5 755 21 36 0 0 chr3R 22348661 22348689 -5556364 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 180 111 0 0 chr3R 22350302 22350329 -5554724 + (TAA)n Simple_repeat Simple_repeat 2 28 0 5 755 24 32 0 0 chr3R 22352342 22352373 -5552680 + AT_rich Low_complexity Low_complexity 1 31 0 5 755 261 163 0 0 chr3R 22354657 22354706 -5550347 + (CAA)n Simple_repeat Simple_repeat 1 49 0 5 755 212 184 20 0 chr3R 22354790 22354839 -5550214 + (CAA)n Simple_repeat Simple_repeat 1 50 0 5 755 213 159 0 0 chr3R 22358208 22358252 -5546801 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 755 237 159 0 0 chr3R 22359057 22359101 -5545952 + (TAA)n Simple_repeat Simple_repeat 3 46 0 5 755 185 94 31 0 chr3R 22360107 22360139 -5544914 + (CAG)n Simple_repeat Simple_repeat 2 34 0 5 755 201 211 0 0 chr3R 22360388 22360445 -5544608 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 755 194 83 56 0 chr3R 22361708 22361744 -5543309 + (TTATA)n Simple_repeat Simple_repeat 1 38 0 5 755 21 82 0 0 chr3R 22361801 22361850 -5543203 + AT_rich Low_complexity Low_complexity 1 49 0 5 755 192 158 0 0 chr3R 22362216 22362254 -5542799 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 5 755 242 246 0 16 chr3R 22362452 22362514 -5542539 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 755 30 27 0 0 chr3R 22363052 22363089 -5541964 + AT_rich Low_complexity Low_complexity 1 37 0 5 755 203 245 0 0 chr3R 22368413 22368462 -5536591 + (TATG)n Simple_repeat Simple_repeat 4 52 0 5 755 180 0 0 0 chr3R 22368996 22369016 -5536037 + (TGAG)n Simple_repeat Simple_repeat 2 21 0 5 755 201 163 20 39 chr3R 22370067 22370118 -5534935 + GA-rich Low_complexity Low_complexity 2 51 0 5 755 21 36 0 0 chr3R 22372281 22372309 -5532744 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 24 0 0 0 chr3R 22372359 22372383 -5532670 + AT_rich Low_complexity Low_complexity 1 24 0 5 755 185 132 26 0 chr3R 22373181 22373219 -5531834 + (CAA)n Simple_repeat Simple_repeat 1 39 0 5 755 24 32 0 0 chr3R 22378855 22378886 -5526167 + AT_rich Low_complexity Low_complexity 1 31 0 5 755 239 113 0 19 chr3R 22379294 22379348 -5525705 + (TTTCG)n Simple_repeat Simple_repeat 4 56 0 5 755 207 0 0 0 chr3R 22383166 22383189 -5521864 + (A)n Simple_repeat Simple_repeat 1 23 0 5 755 3442 2 0 2 chr3R 22384104 22384507 -5520546 + STALKER4_LTR LTR Gypsy 1 402 0 5 755 289 96 0 37 chr3R 22384511 22384565 -5520488 + STALKER4_I LTR Gypsy 1 52 -7350 5 755 36553 5 2 1 chr3R 22384739 22390952 -5514101 + STALKER4_I LTR Gypsy 242 6530 0 5 755 3672 2 0 2 chr3R 22390952 22391355 -5513698 + STALKER4_LTR LTR Gypsy 1 402 0 5 755 221 238 25 12 chr3R 22391867 22391948 -5513105 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 755 186 103 0 0 chr3R 22393373 22393402 -5511651 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 755 189 0 0 0 chr3R 22395020 22395041 -5510012 + (TTCGG)n Simple_repeat Simple_repeat 2 22 0 5 755 21 71 0 0 chr3R 22397448 22397490 -5507563 + AT_rich Low_complexity Low_complexity 1 42 0 5 755 21 0 0 0 chr3R 22398673 22398694 -5506359 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 200 176 0 0 chr3R 22400027 22400061 -5504992 + (CAG)n Simple_repeat Simple_repeat 1 34 0 5 755 21 57 0 0 chr3R 22402640 22402675 -5502378 + AT_rich Low_complexity Low_complexity 1 35 0 5 755 21 0 0 0 chr3R 22403178 22403199 -5501854 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 195 162 0 0 chr3R 22407226 22407263 -5497790 + A-rich Low_complexity Low_complexity 1 37 0 5 755 249 167 0 0 chr3R 22407798 22407852 -5497201 + (TTG)n Simple_repeat Simple_repeat 2 55 0 5 755 226 233 13 27 chr3R 22408068 22408143 -5496910 + (TA)n Simple_repeat Simple_repeat 1 74 0 5 755 210 237 0 0 chr3R 22408259 22408318 -5496735 + T-rich Low_complexity Low_complexity 2 60 0 5 755 25 31 0 0 chr3R 22408553 22408585 -5496468 + AT_rich Low_complexity Low_complexity 1 32 0 5 755 183 42 0 0 chr3R 22413284 22413308 -5491745 + (CAGG)n Simple_repeat Simple_repeat 4 27 0 5 756 213 39 0 0 chr3R 22414410 22414436 -5490617 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 756 204 143 0 23 chr3R 22416601 22416644 -5488409 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 756 216 0 0 0 chr3R 22416827 22416851 -5488202 + (A)n Simple_repeat Simple_repeat 1 24 0 5 756 195 42 0 0 chr3R 22417444 22417468 -5487585 + (CACTC)n Simple_repeat Simple_repeat 2 25 0 5 756 22 35 0 0 chr3R 22419895 22419924 -5485129 + AT_rich Low_complexity Low_complexity 1 29 0 5 756 21 0 0 0 chr3R 22420005 22420026 -5485027 + AT_rich Low_complexity Low_complexity 1 21 0 5 756 24 32 0 0 chr3R 22421633 22421664 -5483389 + AT_rich Low_complexity Low_complexity 1 31 0 5 756 212 194 0 0 chr3R 22421749 22421785 -5483268 + (TTA)n Simple_repeat Simple_repeat 1 36 0 5 756 218 56 0 27 chr3R 22422617 22422654 -5482399 + (TAG)n Simple_repeat Simple_repeat 1 36 0 5 756 198 118 0 0 chr3R 22423553 22423587 -5481466 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 756 198 171 0 0 chr3R 22427085 22427126 -5477927 + (ATG)n Simple_repeat Simple_repeat 3 43 0 5 756 213 279 0 71 chr3R 22427820 22427905 -5477148 + (CGA)n Simple_repeat Simple_repeat 2 80 0 5 756 234 91 0 0 chr3R 22428520 22428553 -5476500 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 756 21 0 0 0 chr3R 22429504 22429525 -5475528 + AT_rich Low_complexity Low_complexity 1 21 0 5 756 208 243 13 26 chr3R 22430655 22430731 -5474322 + (CTG)n Simple_repeat Simple_repeat 1 75 0 5 756 222 91 0 0 chr3R 22431221 22431254 -5473799 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 756 26 0 0 0 chr3R 22434358 22434384 -5470669 + AT_rich Low_complexity Low_complexity 1 26 0 5 756 201 233 0 0 chr3R 22436033 22436076 -5468977 + (TCG)n Simple_repeat Simple_repeat 3 45 0 5 756 201 147 0 0 chr3R 22436659 22436693 -5468360 + (TTCGG)n Simple_repeat Simple_repeat 4 37 0 5 756 22 35 0 0 chr3R 22442064 22442093 -5462960 + AT_rich Low_complexity Low_complexity 1 29 0 5 756 21 0 0 0 chr3R 22443092 22443113 -5461940 + AT_rich Low_complexity Low_complexity 1 21 0 5 756 247 264 0 0 chr3R 22444024 22444077 -5460976 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 5 756 280 321 0 0 chr3R 22445077 22445183 -5459870 + (CGG)n Simple_repeat Simple_repeat 3 108 0 5 756 21 57 0 0 chr3R 22453463 22453498 -5451555 + AT_rich Low_complexity Low_complexity 1 35 0 5 756 25 31 0 0 chr3R 22454582 22454614 -5450439 + AT_rich Low_complexity Low_complexity 1 32 0 5 756 25 31 0 0 chr3R 22456543 22456575 -5448478 + AT_rich Low_complexity Low_complexity 1 32 0 5 756 200 259 0 66 chr3R 22457937 22458028 -5447025 + (GTCTG)n Simple_repeat Simple_repeat 5 89 0 5 756 2578 6 3 31 chr3R 22468505 22468828 -5436225 + LINEJ1_DM LINE Jockey 4707 5020 0 5 756 25 0 0 0 chr3R 22469068 22469093 -5435960 + AT_rich Low_complexity Low_complexity 1 25 0 5 756 217 228 0 17 chr3R 22469655 22469713 -5435340 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 756 251 228 0 0 chr3R 22473335 22473392 -5431661 + T-rich Low_complexity Low_complexity 1 57 0 5 756 219 88 0 0 chr3R 22474336 22474370 -5430683 + (T)n Simple_repeat Simple_repeat 1 34 0 5 756 28 61 0 0 chr3R 22476640 22476689 -5428364 + AT_rich Low_complexity Low_complexity 1 49 0 5 756 210 71 0 0 chr3R 22479151 22479179 -5425874 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 756 270 116 0 0 chr3R 22482985 22483028 -5422025 + (CAG)n Simple_repeat Simple_repeat 3 45 0 5 756 222 143 0 0 chr3R 22487929 22487978 -5417075 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 756 22 35 0 0 chr3R 22493135 22493164 -5411889 + AT_rich Low_complexity Low_complexity 1 29 0 5 756 23 0 0 0 chr3R 22495370 22495393 -5409660 + AT_rich Low_complexity Low_complexity 1 23 0 5 756 182 176 20 0 chr3R 22496877 22496928 -5408125 + A-rich Low_complexity Low_complexity 5 56 0 5 756 27 0 0 0 chr3R 22498464 22498491 -5406562 + AT_rich Low_complexity Low_complexity 1 27 0 5 756 237 119 0 0 chr3R 22504578 22504620 -5400433 + (GCCTG)n Simple_repeat Simple_repeat 3 44 0 5 756 23 33 0 0 chr3R 22508406 22508436 -5396617 + AT_rich Low_complexity Low_complexity 1 30 0 5 756 432 306 74 31 chr3R 22510956 22511212 -5393841 - SAR_DM Satellite Satellite -640 832 566 5 756 275 214 14 28 chr3R 22516516 22516588 -5388465 + (TTTCG)n Simple_repeat Simple_repeat 1 71 0 5 756 27 0 0 0 chr3R 22517748 22517775 -5387278 + AT_rich Low_complexity Low_complexity 1 27 0 5 756 211 217 16 16 chr3R 22518892 22518953 -5386100 + (CTG)n Simple_repeat Simple_repeat 3 63 0 5 756 23 0 0 0 chr3R 22523837 22523860 -5381193 + AT_rich Low_complexity Low_complexity 1 23 0 5 756 21 36 0 0 chr3R 22525350 22525378 -5379675 + AT_rich Low_complexity Low_complexity 1 28 0 5 756 218 213 0 0 chr3R 22537630 22537677 -5367376 + T-rich Low_complexity Low_complexity 1 47 0 5 756 24 85 0 0 chr3R 22543486 22543545 -5361508 + AT_rich Low_complexity Low_complexity 1 59 0 5 757 24 32 0 0 chr3R 22545527 22545558 -5359495 + AT_rich Low_complexity Low_complexity 1 31 0 5 757 245 98 0 24 chr3R 22546245 22546287 -5358766 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 757 21 36 0 0 chr3R 22555220 22555248 -5349805 + AT_rich Low_complexity Low_complexity 1 28 0 5 757 252 130 0 0 chr3R 22555899 22555945 -5349108 + (TGG)n Simple_repeat Simple_repeat 3 48 0 5 757 198 0 0 0 chr3R 22556914 22556936 -5348117 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 757 218 204 0 20 chr3R 22557161 22557211 -5347842 + (CCCA)n Simple_repeat Simple_repeat 1 49 0 5 757 216 0 0 0 chr3R 22558521 22558545 -5346508 + (CAA)n Simple_repeat Simple_repeat 3 26 0 5 757 208 306 0 39 chr3R 22558797 22558899 -5346154 + (TTG)n Simple_repeat Simple_repeat 1 98 0 5 757 204 97 0 0 chr3R 22563456 22563487 -5341566 + (A)n Simple_repeat Simple_repeat 1 31 0 5 757 227 204 0 0 chr3R 22567646 22567695 -5337358 + A-rich Low_complexity Low_complexity 1 49 0 5 757 207 196 0 0 chr3R 22568189 22568235 -5336818 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 757 207 0 0 0 chr3R 22570150 22570173 -5334880 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 757 186 171 0 0 chr3R 22570967 22571008 -5334045 + T-rich Low_complexity Low_complexity 1 41 0 5 757 224 146 35 35 chr3R 22574061 22574118 -5330935 + (CGGA)n Simple_repeat Simple_repeat 1 57 0 5 757 200 135 37 37 chr3R 22575725 22575779 -5329274 + (GTCTG)n Simple_repeat Simple_repeat 1 54 0 5 757 186 71 0 0 chr3R 22576321 22576349 -5328704 + (T)n Simple_repeat Simple_repeat 1 28 0 5 757 245 241 0 0 chr3R 22579564 22579618 -5325435 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 757 27 49 0 0 chr3R 22581204 22581245 -5323808 + AT_rich Low_complexity Low_complexity 1 41 0 5 757 23 0 0 0 chr3R 22582053 22582076 -5322977 + AT_rich Low_complexity Low_complexity 1 23 0 5 757 186 43 0 0 chr3R 22585572 22585595 -5319458 + (CATAC)n Simple_repeat Simple_repeat 1 23 0 5 757 229 133 22 0 chr3R 22586720 22586765 -5318288 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 757 186 71 0 0 chr3R 22590315 22590343 -5314710 + (CATCC)n Simple_repeat Simple_repeat 4 31 0 5 757 213 39 0 0 chr3R 22592819 22592845 -5312208 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 757 24 0 0 0 chr3R 22596296 22596320 -5308733 + AT_rich Low_complexity Low_complexity 1 24 0 5 757 200 261 0 0 chr3R 22598453 22598499 -5306554 + G-rich Low_complexity Low_complexity 3 48 0 5 757 258 32 0 0 chr3R 22601596 22601627 -5303426 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 757 28 0 0 0 chr3R 22604561 22604589 -5300464 + AT_rich Low_complexity Low_complexity 1 28 0 5 757 321 159 0 0 chr3R 22605162 22605225 -5299828 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 757 330 67 0 0 chr3R 22605281 22605326 -5299727 + (ATG)n Simple_repeat Simple_repeat 3 47 0 5 757 246 105 0 0 chr3R 22606584 22606622 -5298431 + (CAGC)n Simple_repeat Simple_repeat 4 41 0 5 757 22 0 0 0 chr3R 22611265 22611287 -5293766 + AT_rich Low_complexity Low_complexity 1 22 0 5 757 216 0 0 0 chr3R 22615918 22615942 -5289111 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 757 23 0 0 0 chr3R 22616947 22616970 -5288083 + AT_rich Low_complexity Low_complexity 1 23 0 5 757 24 0 0 0 chr3R 22618655 22618679 -5286374 + AT_rich Low_complexity Low_complexity 1 24 0 5 757 21 0 0 0 chr3R 22618858 22618879 -5286174 + AT_rich Low_complexity Low_complexity 1 21 0 5 757 243 203 0 0 chr3R 22619181 22619240 -5285813 + (CAG)n Simple_repeat Simple_repeat 3 61 0 5 757 198 0 0 0 chr3R 22622327 22622349 -5282704 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 757 21 0 0 0 chr3R 22624203 22624224 -5280829 + AT_rich Low_complexity Low_complexity 1 21 0 5 757 30 0 0 0 chr3R 22624483 22624513 -5280540 + AT_rich Low_complexity Low_complexity 1 30 0 5 757 35 0 0 0 chr3R 22624582 22624617 -5280436 + AT_rich Low_complexity Low_complexity 1 35 0 5 757 282 73 0 0 chr3R 22625509 22625550 -5279503 + (CTA)n Simple_repeat Simple_repeat 2 42 0 5 757 212 158 0 0 chr3R 22628415 22628453 -5276600 + (CAG)n Simple_repeat Simple_repeat 2 39 0 5 757 270 56 0 0 chr3R 22629341 22629377 -5275676 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 757 202 125 35 18 chr3R 22631540 22631597 -5273456 + A-rich Low_complexity Low_complexity 2 59 0 5 757 264 59 0 0 chr3R 22633155 22633189 -5271864 + (TA)n Simple_repeat Simple_repeat 1 34 0 5 757 4017 0 0 0 chr3R 22636329 22636757 -5268296 - ROO_LTR LTR Pao 0 428 1 5 757 189 132 0 0 chr3R 22637806 22637844 -5267209 + (CGA)n Simple_repeat Simple_repeat 2 39 0 5 757 24 0 0 0 chr3R 22639364 22639388 -5265665 + AT_rich Low_complexity Low_complexity 1 24 0 5 757 233 254 0 0 chr3R 22642504 22642563 -5262490 + (CCCA)n Simple_repeat Simple_repeat 4 62 0 5 757 312 120 0 0 chr3R 22643041 22643091 -5261962 + (TAA)n Simple_repeat Simple_repeat 3 52 0 5 757 204 40 0 0 chr3R 22644999 22645024 -5260029 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 757 201 121 0 0 chr3R 22650473 22650506 -5254547 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 5 757 24 32 0 0 chr3R 22652517 22652548 -5252505 + AT_rich Low_complexity Low_complexity 1 31 0 5 757 21 0 0 0 chr3R 22654249 22654270 -5250783 + AT_rich Low_complexity Low_complexity 1 21 0 5 757 25 31 0 0 chr3R 22654289 22654321 -5250732 + AT_rich Low_complexity Low_complexity 1 32 0 5 757 22 0 0 0 chr3R 22654486 22654508 -5250545 + AT_rich Low_complexity Low_complexity 1 22 0 5 757 330 80 0 0 chr3R 22655321 22655371 -5249682 + (TTG)n Simple_repeat Simple_repeat 1 50 0 5 757 210 320 13 0 chr3R 22655546 22655621 -5249432 + (CATA)n Simple_repeat Simple_repeat 4 79 0 5 757 26 0 0 0 chr3R 22656358 22656384 -5248669 + AT_rich Low_complexity Low_complexity 1 26 0 5 757 186 43 0 0 chr3R 22658186 22658209 -5246844 + (CAT)n Simple_repeat Simple_repeat 1 23 0 5 757 225 0 0 0 chr3R 22660285 22660310 -5244743 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 757 182 59 88 0 chr3R 22662349 22662383 -5242670 + (AGCTG)n Simple_repeat Simple_repeat 1 37 0 5 757 27 0 0 0 chr3R 22668101 22668128 -5236925 + AT_rich Low_complexity Low_complexity 1 27 0 5 757 26 0 0 0 chr3R 22668988 22669014 -5236039 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 26 0 0 0 chr3R 22678170 22678196 -5226857 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 21 0 0 0 chr3R 22679079 22679100 -5225953 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 180 0 0 0 chr3R 22683030 22683050 -5222003 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 758 25 31 0 0 chr3R 22694594 22694626 -5210427 + AT_rich Low_complexity Low_complexity 1 32 0 5 758 234 0 0 0 chr3R 22694645 22694671 -5210382 + (A)n Simple_repeat Simple_repeat 1 26 0 5 758 24 32 0 0 chr3R 22698305 22698336 -5206717 + AT_rich Low_complexity Low_complexity 1 31 0 5 758 207 186 0 0 chr3R 22702649 22702692 -5202361 + (TTG)n Simple_repeat Simple_repeat 1 43 0 5 758 252 0 0 0 chr3R 22702947 22702975 -5202078 + (A)n Simple_repeat Simple_repeat 1 28 0 5 758 200 209 0 0 chr3R 22703996 22704039 -5201014 + (CAT)n Simple_repeat Simple_repeat 1 43 0 5 758 225 0 0 0 chr3R 22705003 22705028 -5200025 + (CAG)n Simple_repeat Simple_repeat 1 25 0 5 758 202 224 0 0 chr3R 22706433 22706482 -5198571 + (ATG)n Simple_repeat Simple_repeat 1 49 0 5 758 22 0 0 0 chr3R 22707046 22707068 -5197985 + AT_rich Low_complexity Low_complexity 1 22 0 5 758 207 100 0 0 chr3R 22707479 22707509 -5197544 + (CGAAT)n Simple_repeat Simple_repeat 4 33 0 5 758 25 65 0 0 chr3R 22709950 22709996 -5195057 + AT_rich Low_complexity Low_complexity 1 46 0 5 758 24 0 0 0 chr3R 22712154 22712178 -5192875 + AT_rich Low_complexity Low_complexity 1 24 0 5 758 300 111 0 0 chr3R 22715799 22715853 -5189200 + (CAGT)n Simple_repeat Simple_repeat 3 56 0 5 758 244 208 0 0 chr3R 22719396 22719444 -5185609 + (CAGT)n Simple_repeat Simple_repeat 3 50 0 5 758 228 67 0 0 chr3R 22722061 22722091 -5182962 + (TATG)n Simple_repeat Simple_repeat 3 32 0 5 758 21 0 0 0 chr3R 22722799 22722820 -5182233 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 29 0 0 0 chr3R 22723142 22723171 -5181882 + AT_rich Low_complexity Low_complexity 1 29 0 5 758 330 87 0 0 chr3R 22723392 22723438 -5181615 + (CAA)n Simple_repeat Simple_repeat 3 48 0 5 758 30 45 0 0 chr3R 22724749 22724793 -5180260 + AT_rich Low_complexity Low_complexity 1 44 0 5 758 26 0 0 0 chr3R 22725898 22725924 -5179129 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 203 156 0 0 chr3R 22730463 22730495 -5174558 + (CATATA)n Simple_repeat Simple_repeat 1 32 0 5 758 204 163 0 23 chr3R 22731687 22731731 -5173322 + (CAAAT)n Simple_repeat Simple_repeat 1 43 0 5 758 225 191 0 0 chr3R 22740191 22740238 -5164815 + A-rich Low_complexity Low_complexity 1 47 0 5 758 26 0 0 0 chr3R 22741208 22741234 -5163819 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 34 42 0 0 chr3R 22742855 22742903 -5162150 + AT_rich Low_complexity Low_complexity 1 48 0 5 758 29 0 0 0 chr3R 22754940 22754969 -5150084 + AT_rich Low_complexity Low_complexity 1 29 0 5 758 23 54 0 0 chr3R 22755588 22755625 -5149428 + AT_rich Low_complexity Low_complexity 1 37 0 5 758 21 36 0 0 chr3R 22756543 22756571 -5148482 + AT_rich Low_complexity Low_complexity 1 28 0 5 758 26 30 0 0 chr3R 22760085 22760118 -5144935 + AT_rich Low_complexity Low_complexity 1 33 0 5 758 210 37 0 0 chr3R 22763112 22763139 -5141914 + (TCC)n Simple_repeat Simple_repeat 3 29 0 5 758 24 32 0 0 chr3R 22773197 22773228 -5131825 + AT_rich Low_complexity Low_complexity 1 31 0 5 758 25 0 0 0 chr3R 22775698 22775723 -5129330 + AT_rich Low_complexity Low_complexity 1 25 0 5 758 26 50 0 0 chr3R 22775904 22775944 -5129109 + AT_rich Low_complexity Low_complexity 1 40 0 5 758 21 0 0 0 chr3R 22777254 22777275 -5127778 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 213 164 66 0 chr3R 22779901 22779962 -5125091 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 758 200 250 33 0 chr3R 22780117 22780177 -5124876 + (CAGAGA)n Simple_repeat Simple_repeat 2 63 0 5 758 24 0 0 0 chr3R 22786715 22786739 -5118314 + AT_rich Low_complexity Low_complexity 1 24 0 5 758 201 121 0 0 chr3R 22788519 22788552 -5116501 + (TATATG)n Simple_repeat Simple_repeat 1 33 0 5 758 206 164 0 18 chr3R 22793077 22793133 -5111920 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 758 21 0 0 0 chr3R 22803290 22803311 -5101742 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 258 153 40 40 chr3R 22805989 22806064 -5098989 + A-rich Low_complexity Low_complexity 4 78 0 5 759 192 40 0 0 chr3R 22806595 22806620 -5098433 + (TATG)n Simple_repeat Simple_repeat 4 28 0 5 759 23 33 0 0 chr3R 22807480 22807510 -5097543 + AT_rich Low_complexity Low_complexity 1 30 0 5 759 35 63 0 0 chr3R 22809618 22809681 -5095372 + AT_rich Low_complexity Low_complexity 1 63 0 5 759 25 31 0 0 chr3R 22810172 22810204 -5094849 + AT_rich Low_complexity Low_complexity 1 32 0 5 759 21 36 0 0 chr3R 22813651 22813679 -5091374 + AT_rich Low_complexity Low_complexity 1 28 0 5 759 22 35 0 0 chr3R 22815635 22815664 -5089389 + AT_rich Low_complexity Low_complexity 1 29 0 5 759 362 247 34 40 chr3R 22818526 22818703 -5086350 + XDMR_DM Unknown Unknown 176 351 -9 5 759 382 250 40 29 chr3R 22818604 22818777 -5086276 - SAR_DM Satellite Satellite -679 793 619 5 759 23 33 0 0 chr3R 22822144 22822174 -5082879 + AT_rich Low_complexity Low_complexity 1 30 0 5 759 3977 5 0 0 chr3R 22833181 22833609 -5071444 + ROO_LTR LTR Pao 1 428 0 5 759 74447 1 4 0 chr3R 22833609 22841830 -5063223 + ROO_I LTR Pao 1 8256 0 5 759 3977 5 0 0 chr3R 22841830 22842258 -5062795 + ROO_LTR LTR Pao 1 428 0 5 759 21 57 0 0 chr3R 22847348 22847383 -5057670 + AT_rich Low_complexity Low_complexity 1 35 0 5 759 23 0 0 0 chr3R 22853439 22853462 -5051591 + AT_rich Low_complexity Low_complexity 1 23 0 5 759 23 33 0 0 chr3R 22858251 22858281 -5046772 + AT_rich Low_complexity Low_complexity 1 30 0 5 759 229 271 0 0 chr3R 22859558 22859606 -5045447 + (TCG)n Simple_repeat Simple_repeat 2 49 0 5 759 21 57 0 0 chr3R 22861907 22861942 -5043111 + AT_rich Low_complexity Low_complexity 1 35 0 5 759 37 0 0 0 chr3R 22866586 22866623 -5038430 + AT_rich Low_complexity Low_complexity 1 37 0 5 759 240 120 65 26 chr3R 22872113 22872190 -5032863 + XDMR_DM Unknown Unknown 274 353 -7 5 759 231 210 72 98 chr3R 22872132 22872285 -5032768 - SAR_DM Satellite Satellite -720 752 604 5 759 23 0 0 0 chr3R 22872769 22872792 -5032261 + AT_rich Low_complexity Low_complexity 1 23 0 5 759 210 222 27 14 chr3R 22874069 22874142 -5030911 + (CTCA)n Simple_repeat Simple_repeat 1 74 0 5 759 231 36 0 0 chr3R 22874528 22874556 -5030497 + (GA)n Simple_repeat Simple_repeat 2 29 0 5 759 308 238 0 37 chr3R 22875311 22875556 -5029497 + (CGG)n Simple_repeat Simple_repeat 1 235 0 5 759 180 0 0 0 chr3R 22876584 22876604 -5028449 + (ATG)n Simple_repeat Simple_repeat 2 21 0 5 759 26 50 0 0 chr3R 22877524 22877564 -5027489 + AT_rich Low_complexity Low_complexity 1 40 0 5 759 25 0 0 0 chr3R 22879813 22879838 -5025215 + AT_rich Low_complexity Low_complexity 1 25 0 5 759 29 28 0 0 chr3R 22885923 22885959 -5019094 + AT_rich Low_complexity Low_complexity 1 36 0 5 759 192 70 22 44 chr3R 22890792 22890837 -5014216 + (TTTTTG)n Simple_repeat Simple_repeat 5 48 0 5 759 21 0 0 0 chr3R 22895229 22895250 -5009803 + AT_rich Low_complexity Low_complexity 1 21 0 5 759 22 0 0 0 chr3R 22900993 22901015 -5004038 + AT_rich Low_complexity Low_complexity 1 22 0 5 759 27 0 0 0 chr3R 22901841 22901868 -5003185 + AT_rich Low_complexity Low_complexity 1 27 0 5 759 180 0 0 0 chr3R 22908175 22908195 -4996858 + (TC)n Simple_repeat Simple_repeat 2 21 0 5 759 205 250 0 0 chr3R 22909564 22909612 -4995441 + (CTGGGG)n Simple_repeat Simple_repeat 1 48 0 5 759 27 0 0 0 chr3R 22918724 22918751 -4986302 + AT_rich Low_complexity Low_complexity 1 27 0 5 759 22 56 0 0 chr3R 22925230 22925266 -4979787 + AT_rich Low_complexity Low_complexity 1 36 0 5 759 23 0 0 0 chr3R 22926205 22926228 -4978825 + AT_rich Low_complexity Low_complexity 1 23 0 5 759 24 67 0 0 chr3R 22926849 22926894 -4978159 + AT_rich Low_complexity Low_complexity 1 45 0 5 759 26 0 0 0 chr3R 22932941 22932967 -4972086 + AT_rich Low_complexity Low_complexity 1 26 0 5 760 21 36 0 0 chr3R 22938055 22938083 -4966970 + AT_rich Low_complexity Low_complexity 1 28 0 5 760 263 307 0 0 chr3R 22941632 22941720 -4963333 + CT-rich Low_complexity Low_complexity 2 89 0 5 760 222 37 0 0 chr3R 22951060 22951087 -4953966 + (TTTAG)n Simple_repeat Simple_repeat 4 30 0 5 760 198 0 0 0 chr3R 22951821 22951843 -4953210 + (CTG)n Simple_repeat Simple_repeat 2 23 0 5 760 222 207 0 0 chr3R 22952602 22952660 -4952393 + (ATGGTG)n Simple_repeat Simple_repeat 4 61 0 5 760 226 333 0 0 chr3R 22953003 22953090 -4951963 + (TCG)n Simple_repeat Simple_repeat 1 87 0 5 760 192 97 0 0 chr3R 22953341 22953372 -4951681 + (TGG)n Simple_repeat Simple_repeat 2 32 0 5 760 206 321 0 0 chr3R 22953372 22953425 -4951628 + (CTG)n Simple_repeat Simple_repeat 2 54 0 5 760 243 0 0 0 chr3R 22959968 22959995 -4945058 + (CAT)n Simple_repeat Simple_repeat 3 29 0 5 760 219 36 0 0 chr3R 22961097 22961125 -4943928 + (GAGTG)n Simple_repeat Simple_repeat 5 32 0 5 760 252 86 0 0 chr3R 22961307 22961342 -4943711 + (CGG)n Simple_repeat Simple_repeat 2 36 0 5 760 231 88 0 0 chr3R 22963661 22963695 -4941358 + (TTG)n Simple_repeat Simple_repeat 1 34 0 5 760 234 62 0 0 chr3R 22965326 22965358 -4939695 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 760 221 57 29 0 chr3R 22966152 22966187 -4938866 + (GAAAA)n Simple_repeat Simple_repeat 2 37 0 5 760 61595 2 3 14 chr3R 22966291 22973844 -4931209 + DM412 LTR Gypsy 1 6897 0 5 760 211 149 43 0 chr3R 22976194 22976241 -4928812 + CT-rich Low_complexity Low_complexity 1 49 0 5 760 183 42 0 0 chr3R 22976282 22976306 -4928747 + (CTCA)n Simple_repeat Simple_repeat 3 26 0 5 760 21 45 0 22 chr3R 22977013 22977036 -4928017 + AT_rich Low_complexity Low_complexity 1 23 0 5 760 430 58 14 28 chr3R 22977036 22977107 -4927946 + (TAA)n Simple_repeat Simple_repeat 1 70 0 5 760 21 45 0 22 chr3R 22977107 22977129 -4927924 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 22 88 0 0 chr3R 22979464 22979521 -4925532 + AT_rich Low_complexity Low_complexity 1 57 0 5 760 240 204 0 0 chr3R 22982954 22983008 -4922045 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 5 760 26 0 0 0 chr3R 22997863 22997889 -4907164 + AT_rich Low_complexity Low_complexity 1 26 0 5 760 203 167 0 0 chr3R 22998666 22998702 -4906351 + (TTGG)n Simple_repeat Simple_repeat 3 38 0 5 760 27 29 0 0 chr3R 23000237 23000271 -4904782 + AT_rich Low_complexity Low_complexity 1 34 0 5 760 22 0 0 0 chr3R 23001235 23001257 -4903796 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 204 97 0 0 chr3R 23001840 23001871 -4903182 + (CAGTT)n Simple_repeat Simple_repeat 5 35 0 5 760 213 196 0 0 chr3R 23002210 23002261 -4902792 + (TCG)n Simple_repeat Simple_repeat 1 51 0 5 760 22 0 0 0 chr3R 23003427 23003449 -4901604 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 309 51 0 0 chr3R 23004328 23004367 -4900686 + (CATTT)n Simple_repeat Simple_repeat 3 41 0 5 760 222 361 0 0 chr3R 23006796 23006904 -4898149 + (CAG)n Simple_repeat Simple_repeat 3 110 0 5 760 225 222 44 44 chr3R 23007664 23007777 -4897276 - XDMR_DM Unknown Unknown -10 350 238 5 760 26 98 0 0 chr3R 23007966 23008048 -4897005 + AT_rich Low_complexity Low_complexity 1 82 0 5 760 186 71 0 0 chr3R 23009709 23009737 -4895316 + (A)n Simple_repeat Simple_repeat 1 28 0 5 760 204 204 18 18 chr3R 23009744 23009799 -4895254 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 760 213 94 0 0 chr3R 23011529 23011561 -4893492 + (ACTG)n Simple_repeat Simple_repeat 1 32 0 5 760 22 0 0 0 chr3R 23017737 23017759 -4887294 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 213 180 0 0 chr3R 23018092 23018142 -4886911 + (CTG)n Simple_repeat Simple_repeat 3 52 0 5 760 233 212 0 0 chr3R 23018419 23018485 -4886568 - ROO_I LTR Pao -7551 705 640 5 760 207 0 0 0 chr3R 23019846 23019869 -4885184 + (TGG)n Simple_repeat Simple_repeat 1 23 0 5 760 215 264 0 0 chr3R 23020676 23020729 -4884324 + (CAG)n Simple_repeat Simple_repeat 1 53 0 5 760 225 209 0 0 chr3R 23020916 23020959 -4884094 + A-rich Low_complexity Low_complexity 1 43 0 5 760 186 128 0 0 chr3R 23024776 23024815 -4880238 + (A)n Simple_repeat Simple_repeat 1 39 0 5 760 189 94 0 0 chr3R 23024992 23025024 -4880029 + (TTTCG)n Simple_repeat Simple_repeat 4 35 0 5 760 21 0 0 0 chr3R 23026649 23026670 -4878383 + AT_rich Low_complexity Low_complexity 1 21 0 5 760 211 220 0 0 chr3R 23029772 23029822 -4875231 + A-rich Low_complexity Low_complexity 1 50 0 5 760 24 53 0 0 chr3R 23030833 23030871 -4874182 + AT_rich Low_complexity Low_complexity 1 38 0 5 760 27 73 0 0 chr3R 23032618 23032673 -4872380 + AT_rich Low_complexity Low_complexity 1 55 0 5 760 186 143 0 0 chr3R 23037516 23037551 -4867502 + (T)n Simple_repeat Simple_repeat 1 35 0 5 760 21 36 0 0 chr3R 23038555 23038583 -4866470 + AT_rich Low_complexity Low_complexity 1 28 0 5 760 21 36 0 0 chr3R 23039625 23039653 -4865400 + AT_rich Low_complexity Low_complexity 1 28 0 5 760 210 37 0 0 chr3R 23040414 23040441 -4864612 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 760 204 67 0 0 chr3R 23041015 23041045 -4864008 + (A)n Simple_repeat Simple_repeat 1 30 0 5 760 32 26 0 0 chr3R 23041941 23041980 -4863073 + AT_rich Low_complexity Low_complexity 1 39 0 5 760 23 0 0 0 chr3R 23046527 23046550 -4858503 + AT_rich Low_complexity Low_complexity 1 23 0 5 760 216 0 0 0 chr3R 23048245 23048269 -4856784 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 760 211 224 0 20 chr3R 23052716 23052766 -4852287 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 5 760 23 0 0 0 chr3R 23054380 23054403 -4850650 + AT_rich Low_complexity Low_complexity 1 23 0 5 760 267 348 6 11 chr3R 23063076 23063256 -4841797 + (CTG)n Simple_repeat Simple_repeat 1 179 0 5 760 231 78 59 0 chr3R 23064101 23064152 -4840901 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 761 21 0 0 0 chr3R 23070871 23070892 -4834161 + AT_rich Low_complexity Low_complexity 1 21 0 5 761 226 250 14 42 chr3R 23079849 23079920 -4825133 + (TATATG)n Simple_repeat Simple_repeat 5 73 0 5 761 328 313 7 7 chr3R 23081493 23081641 -4823412 + (CGA)n Simple_repeat Simple_repeat 1 148 0 5 761 291 279 0 0 chr3R 23087377 23087456 -4817597 + CT-rich Low_complexity Low_complexity 2 80 0 5 761 216 143 0 0 chr3R 23089288 23089330 -4815723 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 761 22 0 0 0 chr3R 23094431 23094453 -4810600 + AT_rich Low_complexity Low_complexity 1 22 0 5 761 183 42 0 0 chr3R 23096209 23096233 -4808820 + (CCCGAA)n Simple_repeat Simple_repeat 4 27 0 5 761 186 103 0 0 chr3R 23096344 23096373 -4808680 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 761 309 118 0 0 chr3R 23096670 23096721 -4808332 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 761 23 54 0 0 chr3R 23100242 23100279 -4804774 + AT_rich Low_complexity Low_complexity 1 37 0 5 761 26 50 0 0 chr3R 23100400 23100440 -4804613 + AT_rich Low_complexity Low_complexity 1 40 0 5 761 180 0 0 0 chr3R 23103179 23103199 -4801854 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 761 237 326 0 0 chr3R 23103380 23103469 -4801584 + (TCG)n Simple_repeat Simple_repeat 3 91 0 5 761 23 0 0 0 chr3R 23106461 23106484 -4798569 + AT_rich Low_complexity Low_complexity 1 23 0 5 761 225 0 0 0 chr3R 23107886 23107911 -4797142 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 761 34 55 0 0 chr3R 23109188 23109243 -4795810 + AT_rich Low_complexity Low_complexity 1 55 0 5 761 304 316 0 0 chr3R 23116477 23116635 -4788418 + (CGA)n Simple_repeat Simple_repeat 3 160 0 5 761 215 145 0 46 chr3R 23116646 23116711 -4788342 + (CTA)n Simple_repeat Simple_repeat 2 63 0 5 761 25 31 0 0 chr3R 23119810 23119842 -4785211 + AT_rich Low_complexity Low_complexity 1 32 0 5 761 219 88 0 0 chr3R 23125497 23125531 -4779522 + (CAT)n Simple_repeat Simple_repeat 1 34 0 5 761 24 0 0 0 chr3R 23131566 23131590 -4773463 + AT_rich Low_complexity Low_complexity 1 24 0 5 761 28 0 0 0 chr3R 23132980 23133008 -4772045 + AT_rich Low_complexity Low_complexity 1 28 0 5 761 24 0 0 0 chr3R 23138067 23138091 -4766962 + AT_rich Low_complexity Low_complexity 1 24 0 5 761 203 171 0 0 chr3R 23140852 23140887 -4764166 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 761 435 38 0 0 chr3R 23142842 23142895 -4762158 + (ATG)n Simple_repeat Simple_repeat 1 53 0 5 761 27 49 0 0 chr3R 23147754 23147795 -4757258 + AT_rich Low_complexity Low_complexity 1 41 0 5 761 291 130 0 0 chr3R 23149113 23149167 -4755886 + (ATG)n Simple_repeat Simple_repeat 1 54 0 5 761 237 108 0 0 chr3R 23152601 23152638 -4752415 + (CAGTT)n Simple_repeat Simple_repeat 4 40 0 5 761 230 229 0 0 chr3R 23153914 23153975 -4751078 + (CATCC)n Simple_repeat Simple_repeat 5 65 0 5 761 210 227 0 0 chr3R 23154149 23154224 -4750829 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 761 23 54 0 0 chr3R 23155090 23155127 -4749926 + AT_rich Low_complexity Low_complexity 1 37 0 5 761 189 0 0 0 chr3R 23158401 23158422 -4746631 + (TGG)n Simple_repeat Simple_repeat 3 23 0 5 761 210 91 0 0 chr3R 23158496 23158529 -4746524 + (CAA)n Simple_repeat Simple_repeat 3 35 0 5 761 182 105 26 0 chr3R 23158652 23158690 -4746363 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 761 23 0 0 0 chr3R 23165034 23165057 -4739996 + AT_rich Low_complexity Low_complexity 1 23 0 5 761 183 80 0 0 chr3R 23165830 23165855 -4739198 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 761 201 132 0 0 chr3R 23166502 23166540 -4738513 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 761 182 62 31 0 chr3R 23167135 23167167 -4737886 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 5 761 3781 7 0 0 chr3R 23168569 23168986 -4736067 - TIRANT_LTR LTR Gypsy 0 417 1 5 761 70919 0 0 0 chr3R 23168986 23176676 -4728377 - TIRANT_I LTR Gypsy 0 7692 1 5 761 3781 7 0 0 chr3R 23176676 23177093 -4727960 - TIRANT_LTR LTR Gypsy 0 417 1 5 761 222 91 0 0 chr3R 23177497 23177530 -4727523 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 761 231 36 0 0 chr3R 23185590 23185618 -4719435 + (CAA)n Simple_repeat Simple_repeat 1 28 0 5 761 21 36 0 0 chr3R 23186395 23186423 -4718630 + AT_rich Low_complexity Low_complexity 1 28 0 5 761 203 0 0 36 chr3R 23192111 23192139 -4712914 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 761 203 185 58 58 chr3R 23192293 23192362 -4712691 + (CATTT)n Simple_repeat Simple_repeat 2 70 0 5 761 301 287 14 35 chr3R 23193738 23193879 -4711174 + (ATG)n Simple_repeat Simple_repeat 3 140 0 5 761 183 42 0 0 chr3R 23196651 23196675 -4708378 + (CAG)n Simple_repeat Simple_repeat 1 24 0 5 761 243 271 0 34 chr3R 23197288 23197376 -4707677 + (CAG)n Simple_repeat Simple_repeat 1 85 0 5 761 210 143 0 0 chr3R 23197532 23197567 -4707486 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 5 761 226 224 17 0 chr3R 23197778 23197836 -4707217 + (CAG)n Simple_repeat Simple_repeat 2 60 0 5 761 248 127 18 0 chr3R 23198109 23198164 -4706889 + (CAG)n Simple_repeat Simple_repeat 1 56 0 5 761 210 71 0 0 chr3R 23198732 23198760 -4706293 + (CAGC)n Simple_repeat Simple_repeat 1 28 0 5 761 23 86 0 0 chr3R 23199064 23199122 -4705931 + AT_rich Low_complexity Low_complexity 1 58 0 5 762 25 0 0 0 chr3R 23200911 23200936 -4704117 + AT_rich Low_complexity Low_complexity 1 25 0 5 762 200 217 0 0 chr3R 23201034 23201080 -4703973 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 762 237 33 0 0 chr3R 23201204 23201234 -4703819 + (TTA)n Simple_repeat Simple_repeat 3 32 0 5 762 228 86 0 0 chr3R 23202243 23202278 -4702775 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 762 216 287 9 18 chr3R 23202440 23202550 -4702503 + (TG)n Simple_repeat Simple_repeat 2 110 0 5 762 220 91 45 0 chr3R 23202590 23202634 -4702419 + (GTTTG)n Simple_repeat Simple_repeat 3 48 0 5 762 208 257 0 28 chr3R 23202811 23202883 -4702170 + (CAA)n Simple_repeat Simple_repeat 2 71 0 5 762 206 224 0 0 chr3R 23207047 23207096 -4697957 + GA-rich Low_complexity Low_complexity 1 49 0 5 762 192 77 0 0 chr3R 23209808 23209834 -4695219 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 762 244 340 0 0 chr3R 23211813 23211907 -4693146 + A-rich Low_complexity Low_complexity 6 99 0 5 762 207 194 0 0 chr3R 23212045 23212081 -4692972 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 762 228 35 0 0 chr3R 23212987 23213016 -4692037 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 762 232 265 15 0 chr3R 23213504 23213572 -4691481 + (CAT)n Simple_repeat Simple_repeat 1 69 0 5 762 180 0 0 0 chr3R 23216247 23216267 -4688786 + (GCTG)n Simple_repeat Simple_repeat 4 23 0 5 762 22 0 0 0 chr3R 23217106 23217128 -4687925 + AT_rich Low_complexity Low_complexity 1 22 0 5 762 22 0 0 0 chr3R 23221270 23221292 -4683761 + AT_rich Low_complexity Low_complexity 1 22 0 5 762 22 56 0 0 chr3R 23224509 23224545 -4680508 + AT_rich Low_complexity Low_complexity 1 36 0 5 762 264 170 0 0 chr3R 23225878 23225931 -4679122 + (TGGA)n Simple_repeat Simple_repeat 3 55 0 5 762 23 0 0 0 chr3R 23226218 23226241 -4678812 + AT_rich Low_complexity Low_complexity 1 23 0 5 762 21 0 0 0 chr3R 23226517 23226538 -4678515 + AT_rich Low_complexity Low_complexity 1 21 0 5 762 198 0 0 0 chr3R 23228298 23228320 -4676733 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 5 762 192 97 0 0 chr3R 23229618 23229649 -4675404 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 762 201 128 51 0 chr3R 23229913 23229952 -4675101 + (CTCA)n Simple_repeat Simple_repeat 3 43 0 5 762 28 0 0 0 chr3R 23233203 23233231 -4671822 + AT_rich Low_complexity Low_complexity 1 28 0 5 762 22 0 0 0 chr3R 23237080 23237102 -4667951 + AT_rich Low_complexity Low_complexity 1 22 0 5 762 27 49 0 0 chr3R 23238157 23238198 -4666855 + AT_rich Low_complexity Low_complexity 1 41 0 5 762 216 0 0 0 chr3R 23241451 23241475 -4663578 + (CTG)n Simple_repeat Simple_repeat 1 24 0 5 762 210 37 0 0 chr3R 23241809 23241836 -4663217 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 762 200 189 0 0 chr3R 23243835 23243872 -4661181 + (CAACC)n Simple_repeat Simple_repeat 3 39 0 5 762 228 111 0 0 chr3R 23247216 23247252 -4657801 + (AAATG)n Simple_repeat Simple_repeat 2 37 0 5 762 216 0 0 0 chr3R 23250075 23250099 -4654954 + (A)n Simple_repeat Simple_repeat 1 24 0 5 762 222 150 0 0 chr3R 23250756 23250796 -4654257 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 762 210 222 0 0 chr3R 23251692 23251737 -4653316 + (CAGC)n Simple_repeat Simple_repeat 2 46 0 5 762 420 67 0 0 chr3R 23251923 23251983 -4653070 + (TC)n Simple_repeat Simple_repeat 2 61 0 5 762 225 0 0 0 chr3R 23252240 23252265 -4652788 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 762 24 32 0 0 chr3R 23253496 23253527 -4651526 + AT_rich Low_complexity Low_complexity 1 31 0 5 762 215 240 0 0 chr3R 23257225 23257275 -4647778 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 5 762 225 65 0 0 chr3R 23258533 23258564 -4646489 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 762 180 182 0 0 chr3R 23258733 23258777 -4646276 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 762 203 244 0 0 chr3R 23260895 23260936 -4644117 + (CTTCG)n Simple_repeat Simple_repeat 4 44 0 5 762 368 69 0 65 chr3R 23263228 23263305 -4641748 + (CTG)n Simple_repeat Simple_repeat 2 73 0 5 762 35 24 0 0 chr3R 23264051 23264093 -4640960 + AT_rich Low_complexity Low_complexity 1 42 0 5 762 189 0 0 0 chr3R 23264887 23264908 -4640145 + (GAAAA)n Simple_repeat Simple_repeat 1 21 0 5 762 183 80 0 0 chr3R 23265569 23265594 -4639459 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 762 189 147 0 0 chr3R 23267161 23267195 -4637858 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 5 762 180 0 0 0 chr3R 23268177 23268197 -4636856 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 762 219 69 0 0 chr3R 23269168 23269197 -4635856 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 762 183 80 0 0 chr3R 23270595 23270620 -4634433 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 762 336 77 0 0 chr3R 23272964 23273016 -4632037 + (ATTCG)n Simple_repeat Simple_repeat 4 55 0 5 762 201 39 0 0 chr3R 23274758 23274784 -4630269 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 5 762 22 35 0 0 chr3R 23275681 23275710 -4629343 + AT_rich Low_complexity Low_complexity 1 29 0 5 762 189 147 0 0 chr3R 23279037 23279071 -4625982 + (TTG)n Simple_repeat Simple_repeat 3 36 0 5 762 213 132 0 0 chr3R 23279126 23279164 -4625889 + (CAA)n Simple_repeat Simple_repeat 1 38 0 5 762 248 67 67 0 chr3R 23281447 23281492 -4623561 + (TTGTG)n Simple_repeat Simple_repeat 2 49 0 5 762 244 229 0 0 chr3R 23284145 23284193 -4620860 + (ATG)n Simple_repeat Simple_repeat 1 48 0 5 762 276 100 0 0 chr3R 23284551 23284591 -4620462 + (ACTG)n Simple_repeat Simple_repeat 3 42 0 5 762 27 0 0 0 chr3R 23286493 23286520 -4618533 + AT_rich Low_complexity Low_complexity 1 27 0 5 762 202 206 0 0 chr3R 23287856 23287890 -4617163 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 762 22 80 0 0 chr3R 23289714 23289764 -4615289 + AT_rich Low_complexity Low_complexity 1 50 0 5 762 21 0 0 0 chr3R 23295335 23295356 -4609697 + AT_rich Low_complexity Low_complexity 1 21 0 5 762 180 0 0 0 chr3R 23300458 23300478 -4604575 + (CGAAT)n Simple_repeat Simple_repeat 3 22 0 5 762 198 0 0 0 chr3R 23300573 23300595 -4604458 + (T)n Simple_repeat Simple_repeat 1 22 0 5 762 203 156 0 0 chr3R 23300782 23300814 -4604239 + CT-rich Low_complexity Low_complexity 2 33 0 5 762 201 74 0 0 chr3R 23301965 23301992 -4603061 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 762 189 74 0 0 chr3R 23317254 23317281 -4587772 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 762 237 108 0 0 chr3R 23317679 23317716 -4587337 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 762 285 135 0 0 chr3R 23320841 23320893 -4584160 + (CCAA)n Simple_repeat Simple_repeat 4 55 0 5 762 189 0 0 0 chr3R 23321035 23321056 -4583997 + (C)n Simple_repeat Simple_repeat 1 21 0 5 762 201 39 0 0 chr3R 23325712 23325738 -4579315 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 762 21 0 0 0 chr3R 23326175 23326196 -4578857 + AT_rich Low_complexity Low_complexity 1 21 0 5 762 180 0 0 0 chr3R 23326307 23326327 -4578726 + (CACTT)n Simple_repeat Simple_repeat 2 21 0 5 762 210 128 0 0 chr3R 23326328 23326367 -4578686 + (CAACT)n Simple_repeat Simple_repeat 3 41 0 5 762 25 0 0 0 chr3R 23326835 23326860 -4578193 + AT_rich Low_complexity Low_complexity 1 25 0 5 762 249 33 0 0 chr3R 23330383 23330413 -4574640 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 763 192 77 0 0 chr3R 23335340 23335366 -4569687 + (CAAAC)n Simple_repeat Simple_repeat 5 30 0 5 763 211 208 0 0 chr3R 23340014 23340062 -4564991 + (CAACC)n Simple_repeat Simple_repeat 1 48 0 5 763 21 0 0 0 chr3R 23340368 23340389 -4564664 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 219 293 0 13 chr3R 23344052 23344128 -4560925 + GA-rich Low_complexity Low_complexity 1 75 0 5 763 210 37 0 0 chr3R 23345458 23345485 -4559568 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 763 4017 0 0 0 chr3R 23346934 23347362 -4557691 + ROO_LTR LTR Pao 1 428 0 5 763 17628 2 4 0 chr3R 23347362 23349324 -4555729 + ROO_I LTR Pao 1 1969 -6287 5 763 52387 1 0 0 chr3R 23349296 23355043 -4550010 - ROO_I LTR Pao -564 7692 1947 5 763 5446 0 2 0 chr3R 23355033 23355657 -4549396 + ROO_I LTR Pao 7632 8256 0 5 763 4017 0 0 0 chr3R 23355657 23356085 -4548968 + ROO_LTR LTR Pao 1 428 0 5 763 212 154 0 0 chr3R 23357805 23357844 -4547209 + (CAG)n Simple_repeat Simple_repeat 2 40 0 5 763 180 200 0 0 chr3R 23358204 23358259 -4546794 + (CAG)n Simple_repeat Simple_repeat 1 55 0 5 763 192 40 0 0 chr3R 23358934 23358959 -4546094 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 763 180 77 0 0 chr3R 23361273 23361299 -4543754 + (A)n Simple_repeat Simple_repeat 1 26 0 5 763 22 0 0 0 chr3R 23361456 23361478 -4543575 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 22 0 0 0 chr3R 23366132 23366154 -4538899 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 249 83 0 0 chr3R 23366418 23366454 -4538599 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 763 22 0 0 0 chr3R 23366489 23366511 -4538542 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 28 61 0 0 chr3R 23372797 23372846 -4532207 + AT_rich Low_complexity Low_complexity 1 49 0 5 763 21 0 0 0 chr3R 23374706 23374727 -4530326 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 25 0 0 0 chr3R 23383397 23383422 -4521631 + AT_rich Low_complexity Low_complexity 1 25 0 5 763 201 39 0 0 chr3R 23384265 23384291 -4520762 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 763 24 32 0 0 chr3R 23387390 23387421 -4517632 + AT_rich Low_complexity Low_complexity 1 31 0 5 763 203 133 0 22 chr3R 23387721 23387767 -4517286 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 763 187 150 16 16 chr3R 23387836 23387897 -4517156 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 763 21 0 0 0 chr3R 23389533 23389554 -4515499 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 23 33 0 0 chr3R 23390479 23390509 -4514544 + AT_rich Low_complexity Low_complexity 1 30 0 5 763 185 0 40 0 chr3R 23390864 23390889 -4514164 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 763 183 100 0 0 chr3R 23393741 23393771 -4511282 + (CTG)n Simple_repeat Simple_repeat 1 30 0 5 763 184 100 0 48 chr3R 23396428 23396470 -4508583 + (CTTTG)n Simple_repeat Simple_repeat 3 42 0 5 763 198 0 0 0 chr3R 23396879 23396901 -4508152 + (TCC)n Simple_repeat Simple_repeat 3 24 0 5 763 293 68 23 0 chr3R 23397886 23397930 -4507123 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 763 204 275 14 0 chr3R 23398760 23398829 -4506224 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 763 220 27 54 0 chr3R 23401402 23401439 -4503614 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 763 235 213 0 0 chr3R 23401720 23401767 -4503286 + (CAAAG)n Simple_repeat Simple_repeat 3 49 0 5 763 291 71 0 0 chr3R 23403315 23403357 -4501696 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 5 763 22 35 0 0 chr3R 23406617 23406646 -4498407 + AT_rich Low_complexity Low_complexity 1 29 0 5 763 189 147 0 0 chr3R 23406668 23406702 -4498351 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 763 21 0 0 0 chr3R 23406731 23406752 -4498301 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 205 176 0 0 chr3R 23410983 23411017 -4494036 + (CAA)n Simple_repeat Simple_repeat 1 34 0 5 763 21 0 0 0 chr3R 23418142 23418163 -4486890 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 25 0 0 0 chr3R 23419733 23419758 -4485295 + AT_rich Low_complexity Low_complexity 1 25 0 5 763 24 32 0 0 chr3R 23420714 23420745 -4484308 + AT_rich Low_complexity Low_complexity 1 31 0 5 763 216 0 0 0 chr3R 23424131 23424155 -4480898 + (TTCTCC)n Simple_repeat Simple_repeat 5 28 0 5 763 183 100 0 0 chr3R 23424514 23424544 -4480509 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 5 763 195 162 0 0 chr3R 23424687 23424724 -4480329 + (TTA)n Simple_repeat Simple_repeat 2 38 0 5 763 21 36 0 0 chr3R 23430150 23430178 -4474875 + AT_rich Low_complexity Low_complexity 1 28 0 5 763 201 159 0 0 chr3R 23432948 23432992 -4472061 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 763 32 57 0 0 chr3R 23433273 23433326 -4471727 + AT_rich Low_complexity Low_complexity 1 53 0 5 763 498 150 0 0 chr3R 23435659 23435739 -4469314 - HOBO DNA hAT -2914 102 23 5 763 22 80 0 0 chr3R 23435878 23435928 -4469125 + AT_rich Low_complexity Low_complexity 1 50 0 5 763 207 0 0 0 chr3R 23445358 23445381 -4459672 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 5 763 22 0 0 0 chr3R 23446934 23446956 -4458097 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 217 180 20 0 chr3R 23446988 23447038 -4458015 + A-rich Low_complexity Low_complexity 4 54 0 5 763 30 0 0 0 chr3R 23451067 23451097 -4453956 + AT_rich Low_complexity Low_complexity 1 30 0 5 763 21 0 0 0 chr3R 23452878 23452899 -4452154 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 210 71 0 0 chr3R 23459769 23459797 -4445256 + (CATCG)n Simple_repeat Simple_repeat 2 29 0 5 763 23 33 0 0 chr3R 23461843 23461873 -4443180 + AT_rich Low_complexity Low_complexity 1 30 0 5 764 220 203 51 0 chr3R 23466522 23466581 -4438472 + (TTCGG)n Simple_repeat Simple_repeat 4 65 0 5 764 261 128 0 0 chr3R 23466728 23466775 -4438278 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 764 183 129 0 0 chr3R 23468007 23468038 -4437015 + (T)n Simple_repeat Simple_repeat 1 31 0 5 764 209 30 61 0 chr3R 23468315 23468348 -4436705 + (TATG)n Simple_repeat Simple_repeat 2 36 0 5 764 201 121 0 0 chr3R 23468432 23468465 -4436588 + (TTTAG)n Simple_repeat Simple_repeat 4 36 0 5 764 222 209 0 0 chr3R 23468683 23468726 -4436327 + GA-rich Low_complexity Low_complexity 2 44 0 5 764 201 139 0 0 chr3R 23471530 23471573 -4433480 + (CTTTA)n Simple_repeat Simple_repeat 4 46 0 5 764 352 82 16 16 chr3R 23473668 23473730 -4431323 + (CTG)n Simple_repeat Simple_repeat 1 62 0 5 764 28 0 0 0 chr3R 23475857 23475885 -4429168 + AT_rich Low_complexity Low_complexity 1 28 0 5 764 40 67 0 0 chr3R 23476457 23476532 -4428521 + AT_rich Low_complexity Low_complexity 1 75 0 5 764 49 43 0 0 chr3R 23477438 23477508 -4427545 + AT_rich Low_complexity Low_complexity 1 70 0 5 764 237 200 0 141 chr3R 23481971 23482099 -4422954 - ROO_I LTR Pao -7512 744 635 5 764 30 0 0 0 chr3R 23482716 23482746 -4422307 + AT_rich Low_complexity Low_complexity 1 30 0 5 764 46 0 0 0 chr3R 23483402 23483448 -4421605 + AT_rich Low_complexity Low_complexity 1 46 0 5 764 23 0 0 0 chr3R 23483483 23483506 -4421547 + AT_rich Low_complexity Low_complexity 1 23 0 5 764 304 72 0 35 chr3R 23483570 23483628 -4421425 + (TTG)n Simple_repeat Simple_repeat 2 57 0 5 764 243 88 0 0 chr3R 23494085 23494119 -4410934 + (TATG)n Simple_repeat Simple_repeat 1 34 0 5 764 27 0 0 0 chr3R 23504827 23504854 -4400199 + AT_rich Low_complexity Low_complexity 1 27 0 5 764 235 217 0 0 chr3R 23507120 23507166 -4397887 + (CCA)n Simple_repeat Simple_repeat 2 47 0 5 764 21 0 0 0 chr3R 23508027 23508048 -4397005 + AT_rich Low_complexity Low_complexity 1 21 0 5 764 200 259 0 18 chr3R 23514300 23514355 -4390698 + G-rich Low_complexity Low_complexity 27 80 0 5 764 233 133 0 32 chr3R 23517266 23517328 -4387725 + (CACTC)n Simple_repeat Simple_repeat 5 64 0 5 764 213 39 0 0 chr3R 23518758 23518784 -4386269 + (A)n Simple_repeat Simple_repeat 1 26 0 5 764 310 256 0 0 chr3R 23527581 23527659 -4377394 + (CAG)n Simple_repeat Simple_repeat 1 78 0 5 764 274 235 0 0 chr3R 23527888 23527956 -4377097 + ROO_I LTR Pao 657 724 -7532 5 764 32 26 0 0 chr3R 23532713 23532752 -4372301 + AT_rich Low_complexity Low_complexity 1 39 0 5 764 291 364 0 0 chr3R 23533529 23533669 -4371384 + GA-rich Low_complexity Low_complexity 5 144 0 5 764 21 0 0 0 chr3R 23536301 23536322 -4368731 + AT_rich Low_complexity Low_complexity 1 21 0 5 764 201 154 0 0 chr3R 23539102 23539141 -4365912 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 764 235 175 0 34 chr3R 23540228 23540287 -4364766 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 764 240 35 0 0 chr3R 23541860 23541889 -4363164 + (TCCTG)n Simple_repeat Simple_repeat 2 30 0 5 764 28 0 0 0 chr3R 23543285 23543313 -4361740 + AT_rich Low_complexity Low_complexity 1 28 0 5 764 219 69 0 0 chr3R 23546799 23546828 -4358225 + (CAGC)n Simple_repeat Simple_repeat 3 31 0 5 764 245 238 0 0 chr3R 23550007 23550070 -4354983 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 764 208 227 0 0 chr3R 23550194 23550238 -4354815 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 764 44776 1 0 0 chr3R 23551345 23556705 -4348348 + I_DM LINE I 98 5457 -774 5 764 189 0 0 0 chr3R 23556705 23556726 -4348327 + (TAA)n Simple_repeat Simple_repeat 3 23 0 5 764 231 173 0 0 chr3R 23559793 23559845 -4345208 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 764 216 111 0 0 chr3R 23562340 23562376 -4342677 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 764 213 250 0 0 chr3R 23563250 23563310 -4341743 + (CAA)n Simple_repeat Simple_repeat 3 62 0 5 764 191 143 0 39 chr3R 23571229 23571280 -4333773 + (CGAAA)n Simple_repeat Simple_repeat 3 51 0 5 764 216 171 0 0 chr3R 23575144 23575185 -4329868 + (CAGC)n Simple_repeat Simple_repeat 2 42 0 5 764 211 205 0 0 chr3R 23578848 23578887 -4326166 + A-rich Low_complexity Low_complexity 4 42 0 5 764 222 213 0 0 chr3R 23579509 23579556 -4325497 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 764 234 62 0 0 chr3R 23580961 23580993 -4324060 + (AGATG)n Simple_repeat Simple_repeat 4 35 0 5 764 218 182 0 0 chr3R 23584910 23584954 -4320099 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 764 248 278 43 22 chr3R 23588554 23588646 -4316407 + (TGGG)n Simple_repeat Simple_repeat 3 96 0 5 764 26 30 0 0 chr3R 23589131 23589164 -4315889 + AT_rich Low_complexity Low_complexity 1 33 0 5 764 186 43 0 0 chr3R 23589555 23589578 -4315475 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 764 285 272 0 0 chr3R 23590024 23590116 -4314937 + (CTG)n Simple_repeat Simple_repeat 3 94 0 5 764 261 0 0 0 chr3R 23590957 23590986 -4314067 + (GCTG)n Simple_repeat Simple_repeat 3 31 0 5 764 23 33 0 0 chr3R 23592783 23592813 -4312240 + AT_rich Low_complexity Low_complexity 1 30 0 5 765 201 39 0 0 chr3R 23594698 23594724 -4310329 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 765 241 281 0 0 chr3R 23596020 23596084 -4308969 + (TATG)n Simple_repeat Simple_repeat 1 64 0 5 765 222 225 0 0 chr3R 23596413 23596493 -4308560 + GA-rich Low_complexity Low_complexity 2 81 0 5 765 211 294 15 0 chr3R 23597082 23597150 -4307903 + (CATA)n Simple_repeat Simple_repeat 3 71 0 5 765 255 31 0 0 chr3R 23598043 23598075 -4306978 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 765 242 184 0 0 chr3R 23599348 23599386 -4305667 + G2_DM LINE Jockey 530 567 -2535 5 765 210 150 0 0 chr3R 23599389 23599429 -4305624 + (A)n Simple_repeat Simple_repeat 1 40 0 5 765 255 197 0 0 chr3R 23599733 23599794 -4305259 - ROO_I LTR Pao -7533 723 663 5 765 219 114 0 0 chr3R 23600194 23600229 -4304824 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 765 274 261 17 25 chr3R 23602405 23602523 -4302530 - XDMR_DM Unknown Unknown -202 158 42 5 765 2001 264 35 34 chr3R 23602417 23603503 -4301550 + SAR_DM Satellite Satellite 180 1266 -206 5 765 739 221 30 30 chr3R 23603278 23603544 -4301509 - XDMR_DM Unknown Unknown -4 356 91 5 765 270 56 0 0 chr3R 23605033 23605069 -4299984 + (TGAG)n Simple_repeat Simple_repeat 2 37 0 5 765 240 35 0 0 chr3R 23606885 23606914 -4298139 + (CAT)n Simple_repeat Simple_repeat 1 29 0 5 765 180 158 0 0 chr3R 23609396 23609434 -4295619 + T-rich Low_complexity Low_complexity 1 38 0 5 765 239 73 0 47 chr3R 23610699 23610742 -4294311 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 5 765 180 0 0 0 chr3R 23611162 23611182 -4293871 + (A)n Simple_repeat Simple_repeat 1 20 0 5 765 435 19 0 0 chr3R 23616741 23616793 -4288260 + (CAGC)n Simple_repeat Simple_repeat 3 54 0 5 765 261 0 0 0 chr3R 23617391 23617420 -4287633 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 765 28659 2 0 0 chr3R 23617420 23620493 -4284560 + DMRT1B LINE R1 2106 5178 -5 5 765 180 0 0 0 chr3R 23620493 23620513 -4284540 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 765 228 163 0 0 chr3R 23620877 23620920 -4284133 + (CCGAA)n Simple_repeat Simple_repeat 1 43 0 5 765 189 0 0 0 chr3R 23621772 23621793 -4283260 + (GTATG)n Simple_repeat Simple_repeat 3 23 0 5 765 195 42 0 0 chr3R 23622646 23622670 -4282383 + (TC)n Simple_repeat Simple_repeat 2 25 0 5 765 210 200 36 0 chr3R 23626919 23626974 -4278079 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 765 23 0 0 0 chr3R 23627616 23627639 -4277414 + AT_rich Low_complexity Low_complexity 1 23 0 5 765 215 218 18 0 chr3R 23628296 23628351 -4276702 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 765 206 163 0 20 chr3R 23629670 23629720 -4275333 + GA-rich Low_complexity Low_complexity 3 51 0 5 765 231 61 0 0 chr3R 23633370 23633403 -4271650 + (CACTG)n Simple_repeat Simple_repeat 3 35 0 5 765 201 271 0 0 chr3R 23637169 23637217 -4267836 + (CAA)n Simple_repeat Simple_repeat 2 49 0 5 765 209 243 14 14 chr3R 23638394 23638465 -4266588 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 765 195 42 0 0 chr3R 23638630 23638654 -4266399 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 765 206 231 0 0 chr3R 23641163 23641215 -4263838 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 765 243 0 0 0 chr3R 23641378 23641405 -4263648 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 765 21 0 0 0 chr3R 23642919 23642940 -4262113 + GC_rich Low_complexity Low_complexity 1 21 0 5 765 205 171 0 0 chr3R 23645083 23645118 -4259935 + GA-rich Low_complexity Low_complexity 4 38 0 5 765 26 64 0 0 chr3R 23646010 23646057 -4258996 + AT_rich Low_complexity Low_complexity 1 47 0 5 765 182 37 37 0 chr3R 23646685 23646712 -4258341 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 765 180 152 0 0 chr3R 23648873 23648906 -4256147 + (CGAGT)n Simple_repeat Simple_repeat 3 35 0 5 765 207 139 0 0 chr3R 23652925 23652961 -4252092 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 765 206 245 0 0 chr3R 23653082 23653135 -4251918 + T-rich Low_complexity Low_complexity 1 53 0 5 765 201 158 0 0 chr3R 23654545 23654583 -4250470 + (ATG)n Simple_repeat Simple_repeat 3 40 0 5 765 201 133 0 0 chr3R 23657262 23657292 -4247761 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 765 225 200 0 0 chr3R 23658369 23658414 -4246639 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 765 33 43 0 0 chr3R 23659483 23659530 -4245523 + AT_rich Low_complexity Low_complexity 1 47 0 5 765 180 0 0 0 chr3R 23660470 23660490 -4244563 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 765 25 0 0 0 chr3R 23661078 23661103 -4243950 + AT_rich Low_complexity Low_complexity 1 25 0 5 765 210 71 0 0 chr3R 23662211 23662239 -4242814 + (ATTCG)n Simple_repeat Simple_repeat 5 32 0 5 765 208 280 0 0 chr3R 23662758 23662808 -4242245 + (TCCG)n Simple_repeat Simple_repeat 1 50 0 5 765 216 67 0 0 chr3R 23665081 23665111 -4239942 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 765 21 0 0 0 chr3R 23666635 23666656 -4238397 + AT_rich Low_complexity Low_complexity 1 21 0 5 765 183 129 0 0 chr3R 23667019 23667050 -4238003 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 765 200 149 0 21 chr3R 23667081 23667129 -4237924 + GA-rich Low_complexity Low_complexity 3 49 0 5 765 21 36 0 0 chr3R 23667794 23667822 -4237231 + AT_rich Low_complexity Low_complexity 1 28 0 5 765 21 36 0 0 chr3R 23667885 23667913 -4237140 + AT_rich Low_complexity Low_complexity 1 28 0 5 765 198 0 0 0 chr3R 23668649 23668671 -4236382 + (TAA)n Simple_repeat Simple_repeat 2 23 0 5 765 212 111 0 53 chr3R 23669942 23669980 -4235073 + (CGTG)n Simple_repeat Simple_repeat 3 38 0 5 765 231 36 0 0 chr3R 23674978 23675006 -4230047 + (CAGTT)n Simple_repeat Simple_repeat 1 28 0 5 765 211 244 0 0 chr3R 23675523 23675591 -4229462 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 765 21 36 0 0 chr3R 23678518 23678546 -4226507 + AT_rich Low_complexity Low_complexity 1 28 0 5 765 22 35 0 0 chr3R 23679505 23679534 -4225519 + AT_rich Low_complexity Low_complexity 1 29 0 5 765 23 0 0 0 chr3R 23680045 23680068 -4224985 + AT_rich Low_complexity Low_complexity 1 23 0 5 765 213 154 0 0 chr3R 23681461 23681500 -4223553 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 765 210 37 0 0 chr3R 23682322 23682349 -4222704 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 765 11681 17 7 0 chr3R 23682536 23683961 -4221092 - M4DM DNA Transib 0 1435 1 5 765 2879 3 0 0 chr3R 23688730 23689060 -4215993 - TRANSPAC_LTR LTR Gypsy 0 330 1 5 765 38733 2 0 0 chr3R 23689059 23693648 -4211405 - TRANSPAC_I LTR Gypsy 0 4590 1 5 765 2879 3 0 0 chr3R 23693648 23693978 -4211075 - TRANSPAC_LTR LTR Gypsy 0 330 1 5 765 222 229 0 0 chr3R 23694770 23694818 -4210235 + (TCTG)n Simple_repeat Simple_repeat 4 51 0 5 765 211 167 42 0 chr3R 23695384 23695432 -4209621 + (CACCAT)n Simple_repeat Simple_repeat 4 53 0 5 765 216 0 0 0 chr3R 23696244 23696268 -4208785 + (CATATA)n Simple_repeat Simple_repeat 5 28 0 5 765 180 0 0 0 chr3R 23696400 23696420 -4208633 + (CAG)n Simple_repeat Simple_repeat 1 20 0 5 765 213 200 0 0 chr3R 23697708 23697753 -4207300 + (CAGCC)n Simple_repeat Simple_repeat 5 49 0 5 765 21 0 0 0 chr3R 23698820 23698841 -4206212 + AT_rich Low_complexity Low_complexity 1 21 0 5 765 228 122 0 0 chr3R 23700716 23700757 -4204296 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 765 3344 7 7 7 chr3R 23701476 23701890 -4203163 + DM297_LTR LTR Gypsy 1 414 0 5 765 51055 7 0 1 chr3R 23701890 23708060 -4196993 + DM297_I LTR Gypsy 1 6167 0 5 765 3368 5 7 7 chr3R 23708060 23708474 -4196579 + DM297_LTR LTR Gypsy 1 414 0 5 765 264 77 0 0 chr3R 23710003 23710042 -4195011 + (ATTG)n Simple_repeat Simple_repeat 1 39 0 5 765 21 0 0 0 chr3R 23711413 23711434 -4193619 + AT_rich Low_complexity Low_complexity 1 21 0 5 765 23 0 0 0 chr3R 23713766 23713789 -4191264 + AT_rich Low_complexity Low_complexity 1 23 0 5 765 219 305 0 0 chr3R 23715917 23715976 -4189077 + (TATG)n Simple_repeat Simple_repeat 1 59 0 5 765 228 200 0 0 chr3R 23716187 23716257 -4188796 + A-rich Low_complexity Low_complexity 1 70 0 5 765 204 97 0 0 chr3R 23717072 23717103 -4187950 + (T)n Simple_repeat Simple_repeat 1 31 0 5 765 186 133 0 0 chr3R 23718525 23718555 -4186498 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 765 192 77 0 0 chr3R 23718838 23718864 -4186189 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 765 189 132 0 0 chr3R 23720913 23720951 -4184102 + (TTCTG)n Simple_repeat Simple_repeat 1 38 0 5 765 22 0 0 0 chr3R 23722940 23722962 -4182091 + AT_rich Low_complexity Low_complexity 1 22 0 5 766 189 175 0 0 chr3R 23724312 23724352 -4180701 + (CATAC)n Simple_repeat Simple_repeat 4 43 0 5 766 228 67 0 0 chr3R 23727131 23727161 -4177892 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 766 225 132 0 0 chr3R 23728958 23728996 -4176057 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 766 21 0 0 0 chr3R 23730950 23730971 -4174082 + AT_rich Low_complexity Low_complexity 1 21 0 5 766 28 86 0 0 chr3R 23732219 23732289 -4172764 + AT_rich Low_complexity Low_complexity 1 70 0 5 766 23 0 0 0 chr3R 23733470 23733493 -4171560 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 258 269 0 0 chr3R 23733881 23733959 -4171094 + T-rich Low_complexity Low_complexity 1 78 0 5 766 270 56 0 0 chr3R 23734362 23734398 -4170655 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 766 198 194 0 0 chr3R 23734901 23734963 -4170090 + (CCCA)n Simple_repeat Simple_repeat 1 62 0 5 766 291 93 0 0 chr3R 23735366 23735409 -4169644 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 766 192 77 0 0 chr3R 23735626 23735652 -4169401 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 766 214 29 57 0 chr3R 23737436 23737471 -4167582 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 766 25 0 0 0 chr3R 23742324 23742349 -4162704 + AT_rich Low_complexity Low_complexity 1 25 0 5 766 30 0 0 0 chr3R 23745227 23745257 -4159796 + AT_rich Low_complexity Low_complexity 1 30 0 5 766 195 69 0 0 chr3R 23746309 23746338 -4158715 + (TCC)n Simple_repeat Simple_repeat 2 30 0 5 766 29 0 0 0 chr3R 23746731 23746760 -4158293 + AT_rich Low_complexity Low_complexity 1 29 0 5 766 26 50 0 0 chr3R 23746870 23746910 -4158143 + AT_rich Low_complexity Low_complexity 1 40 0 5 766 24 0 0 0 chr3R 23751356 23751380 -4153673 + AT_rich Low_complexity Low_complexity 1 24 0 5 766 22 0 0 0 chr3R 23752136 23752158 -4152895 + AT_rich Low_complexity Low_complexity 1 22 0 5 766 21 0 0 0 chr3R 23757006 23757027 -4148026 + AT_rich Low_complexity Low_complexity 1 21 0 5 766 35 0 0 0 chr3R 23763716 23763751 -4141302 + AT_rich Low_complexity Low_complexity 1 35 0 5 766 350 176 0 73 chr3R 23765736 23765901 -4139152 + (CCA)n Simple_repeat Simple_repeat 1 153 0 5 766 24 0 0 0 chr3R 23769156 23769180 -4135873 + AT_rich Low_complexity Low_complexity 1 24 0 5 766 235 85 21 21 chr3R 23769319 23769367 -4135686 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 766 288 130 0 0 chr3R 23771741 23771787 -4133266 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 766 213 250 0 0 chr3R 23772475 23772523 -4132530 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 766 183 186 0 0 chr3R 23773370 23773413 -4131640 + (TGG)n Simple_repeat Simple_repeat 2 44 0 5 766 216 303 0 0 chr3R 23775711 23775810 -4129243 + GA-rich Low_complexity Low_complexity 2 100 0 5 766 21 36 0 0 chr3R 23784904 23784932 -4120121 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 25 31 0 0 chr3R 23786889 23786921 -4118132 + AT_rich Low_complexity Low_complexity 1 32 0 5 766 21 36 0 0 chr3R 23787550 23787578 -4117475 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 25 31 0 0 chr3R 23789535 23789567 -4115486 + AT_rich Low_complexity Low_complexity 1 32 0 5 766 203 182 0 0 chr3R 23794510 23794543 -4110510 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 5 766 180 0 0 0 chr3R 23797549 23797569 -4107484 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 766 264 261 0 0 chr3R 23799283 23799348 -4105705 + (CTG)n Simple_repeat Simple_repeat 3 67 0 5 766 233 220 0 0 chr3R 23800530 23800580 -4104473 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 766 198 0 0 0 chr3R 23800731 23800753 -4104300 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 766 198 0 0 0 chr3R 23802739 23802761 -4102292 + (A)n Simple_repeat Simple_repeat 1 22 0 5 766 27 0 0 0 chr3R 23803239 23803266 -4101787 + AT_rich Low_complexity Low_complexity 1 27 0 5 766 27 62 0 0 chr3R 23803286 23803334 -4101719 + AT_rich Low_complexity Low_complexity 1 48 0 5 766 30 27 0 0 chr3R 23803866 23803903 -4101150 + AT_rich Low_complexity Low_complexity 1 37 0 5 766 192 77 0 0 chr3R 23805291 23805317 -4099736 + (CATTG)n Simple_repeat Simple_repeat 2 27 0 5 766 189 0 0 0 chr3R 23806874 23806895 -4098158 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 766 24 0 0 0 chr3R 23806949 23806973 -4098080 + AT_rich Low_complexity Low_complexity 1 24 0 5 766 22 0 0 0 chr3R 23809207 23809229 -4095824 + AT_rich Low_complexity Low_complexity 1 22 0 5 766 216 0 0 0 chr3R 23812014 23812038 -4093015 + (A)n Simple_repeat Simple_repeat 1 24 0 5 766 195 42 0 0 chr3R 23813648 23813672 -4091381 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 766 21 0 0 0 chr3R 23814389 23814410 -4090643 + AT_rich Low_complexity Low_complexity 1 21 0 5 766 198 0 0 0 chr3R 23818024 23818046 -4087007 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 766 22 35 0 0 chr3R 23818497 23818526 -4086527 + AT_rich Low_complexity Low_complexity 1 29 0 5 766 210 266 0 71 chr3R 23822870 23822955 -4082098 + T-rich Low_complexity Low_complexity 3 81 0 5 766 223 300 0 0 chr3R 23823461 23823531 -4081522 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 766 189 0 0 0 chr3R 23823913 23823934 -4081119 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 766 186 171 0 0 chr3R 23824235 23824276 -4080777 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 766 21 36 0 0 chr3R 23824521 23824549 -4080504 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 195 125 0 0 chr3R 23825723 23825763 -4079290 + (CTG)n Simple_repeat Simple_repeat 2 41 0 5 766 23 0 0 0 chr3R 23826840 23826863 -4078190 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 226 271 0 0 chr3R 23829139 23829198 -4075855 + (CAGGG)n Simple_repeat Simple_repeat 4 62 0 5 766 180 125 0 0 chr3R 23833764 23833796 -4071257 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 766 23 0 0 0 chr3R 23834199 23834222 -4070831 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 215 284 0 0 chr3R 23837522 23837589 -4067464 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 766 39 80 0 0 chr3R 23839084 23839172 -4065881 + AT_rich Low_complexity Low_complexity 1 88 0 5 766 21 36 0 0 chr3R 23840398 23840426 -4064627 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 29 94 0 0 chr3R 23842053 23842138 -4062915 + AT_rich Low_complexity Low_complexity 1 85 0 5 766 21 57 0 0 chr3R 23851541 23851576 -4053477 + AT_rich Low_complexity Low_complexity 1 35 0 5 766 201 147 0 0 chr3R 23851880 23851914 -4053139 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 766 207 0 0 0 chr3R 23852211 23852234 -4052819 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 766 27 49 0 0 chr3R 23852915 23852956 -4052097 + AT_rich Low_complexity Low_complexity 1 41 0 5 766 216 111 0 0 chr3R 23853715 23853751 -4051302 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 766 213 229 21 0 chr3R 23854012 23854060 -4050993 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 766 23 0 0 0 chr3R 23854077 23854100 -4050953 + AT_rich Low_complexity Low_complexity 1 23 0 5 767 26 64 0 0 chr3R 23857960 23858007 -4047046 + AT_rich Low_complexity Low_complexity 1 47 0 5 767 201 184 0 20 chr3R 23859530 23859580 -4045473 + T-rich Low_complexity Low_complexity 3 51 0 5 767 219 170 0 0 chr3R 23861398 23861445 -4043608 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 767 231 61 0 0 chr3R 23862013 23862046 -4043007 + (A)n Simple_repeat Simple_repeat 1 33 0 5 767 27 0 0 0 chr3R 23864118 23864145 -4040908 + AT_rich Low_complexity Low_complexity 1 27 0 5 767 357 224 66 2 chr3R 23865299 23865427 -4039626 + XDMR_DM Unknown Unknown 3 129 -232 5 767 219 69 0 0 chr3R 23866429 23866458 -4038595 + (CAATC)n Simple_repeat Simple_repeat 3 31 0 5 767 252 0 0 0 chr3R 23866965 23866993 -4038060 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 767 300 127 0 0 chr3R 23868797 23868852 -4036201 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 767 28 61 0 0 chr3R 23869523 23869572 -4035481 + AT_rich Low_complexity Low_complexity 1 49 0 5 767 24 32 0 0 chr3R 23870412 23870443 -4034610 + AT_rich Low_complexity Low_complexity 1 31 0 5 767 189 94 0 0 chr3R 23871065 23871097 -4033956 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 767 189 0 0 0 chr3R 23871516 23871537 -4033516 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 767 26 0 0 0 chr3R 23871847 23871873 -4033180 + AT_rich Low_complexity Low_complexity 1 26 0 5 767 223 189 19 0 chr3R 23872680 23872733 -4032320 + (TGGG)n Simple_repeat Simple_repeat 1 54 0 5 767 27 0 0 0 chr3R 23873527 23873554 -4031499 + AT_rich Low_complexity Low_complexity 1 27 0 5 767 26 50 0 0 chr3R 23874330 23874370 -4030683 + AT_rich Low_complexity Low_complexity 1 40 0 5 767 27 29 0 0 chr3R 23874593 23874627 -4030426 + AT_rich Low_complexity Low_complexity 1 34 0 5 767 22 0 0 0 chr3R 23874763 23874785 -4030268 + AT_rich Low_complexity Low_complexity 1 22 0 5 767 253 130 0 42 chr3R 23875649 23875721 -4029332 + (CAG)n Simple_repeat Simple_repeat 1 69 0 5 767 373 167 0 24 chr3R 23875769 23875892 -4029161 + (CAG)n Simple_repeat Simple_repeat 1 120 0 5 767 251 131 0 47 chr3R 23875939 23876003 -4029050 + (CAG)n Simple_repeat Simple_repeat 3 63 0 5 767 192 77 0 0 chr3R 23876691 23876717 -4028336 + (ATTCG)n Simple_repeat Simple_repeat 3 28 0 5 767 225 0 0 0 chr3R 23876878 23876903 -4028150 + (T)n Simple_repeat Simple_repeat 1 25 0 5 767 21 0 0 0 chr3R 23877596 23877617 -4027436 + AT_rich Low_complexity Low_complexity 1 21 0 5 767 27 29 0 0 chr3R 23877699 23877733 -4027320 + AT_rich Low_complexity Low_complexity 1 34 0 5 767 192 135 0 0 chr3R 23878718 23878755 -4026298 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 767 207 0 0 0 chr3R 23879869 23879892 -4025161 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 767 36 23 0 0 chr3R 23882955 23882998 -4022055 + AT_rich Low_complexity Low_complexity 1 43 0 5 767 291 140 0 0 chr3R 23884402 23884452 -4020601 + (CCA)n Simple_repeat Simple_repeat 3 52 0 5 767 197 133 0 62 chr3R 23888130 23888178 -4016875 + A-rich Low_complexity Low_complexity 1 45 0 5 767 21 36 0 0 chr3R 23888774 23888802 -4016251 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 47232 1 0 1 chr3R 23894269 23899657 -4005396 - I_DM LINE I -750 5481 95 5 767 28 0 0 0 chr3R 23902906 23902934 -4002119 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 212 244 0 0 chr3R 23904447 23904488 -4000565 + (CCCGAA)n Simple_repeat Simple_repeat 4 44 0 5 767 26 0 0 0 chr3R 23907383 23907409 -3997644 + AT_rich Low_complexity Low_complexity 1 26 0 5 767 212 100 0 24 chr3R 23909728 23909769 -3995284 + (CAA)n Simple_repeat Simple_repeat 2 41 0 5 767 341 95 16 0 chr3R 23910476 23910539 -3994514 + (ATTCG)n Simple_repeat Simple_repeat 1 64 0 5 767 25 31 0 0 chr3R 23911377 23911409 -3993644 + AT_rich Low_complexity Low_complexity 1 32 0 5 767 22 35 0 0 chr3R 23911746 23911775 -3993278 + AT_rich Low_complexity Low_complexity 1 29 0 5 767 253 152 0 43 chr3R 23912689 23912758 -3992295 + (CAAAC)n Simple_repeat Simple_repeat 5 70 0 5 767 23 33 0 0 chr3R 23914218 23914248 -3990805 + AT_rich Low_complexity Low_complexity 1 30 0 5 767 232 214 0 18 chr3R 23914493 23914550 -3990503 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 767 213 132 0 0 chr3R 23914611 23914649 -3990404 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 5 767 223 175 0 0 chr3R 23915402 23915442 -3989611 + A-rich Low_complexity Low_complexity 3 42 0 5 767 217 275 0 12 chr3R 23915460 23915541 -3989512 + (CAGAGA)n Simple_repeat Simple_repeat 3 82 0 5 767 240 35 0 0 chr3R 23915560 23915589 -3989464 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 767 229 143 61 0 chr3R 23916308 23916357 -3988696 + A-rich Low_complexity Low_complexity 2 53 0 5 767 32 67 0 0 chr3R 23919262 23919322 -3985731 + AT_rich Low_complexity Low_complexity 1 60 0 5 767 21 0 0 0 chr3R 23919511 23919532 -3985521 + AT_rich Low_complexity Low_complexity 1 21 0 5 767 219 88 0 0 chr3R 23920730 23920764 -3984289 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 767 23 0 0 0 chr3R 23924948 23924971 -3980082 + AT_rich Low_complexity Low_complexity 1 23 0 5 767 243 229 11 46 chr3R 23929451 23929538 -3975515 + A-rich Low_complexity Low_complexity 5 88 0 5 767 202 250 17 0 chr3R 23931812 23931872 -3973181 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 5 767 246 32 0 0 chr3R 23931980 23932011 -3973042 + (CAG)n Simple_repeat Simple_repeat 2 32 0 5 767 30 27 0 0 chr3R 23934432 23934469 -3970584 + AT_rich Low_complexity Low_complexity 1 37 0 5 767 36 53 0 0 chr3R 23936988 23937045 -3968008 + AT_rich Low_complexity Low_complexity 1 57 0 5 767 25 51 0 0 chr3R 23938415 23938454 -3966599 + AT_rich Low_complexity Low_complexity 1 39 0 5 767 195 129 0 0 chr3R 23939138 23939169 -3965884 + (TTCCG)n Simple_repeat Simple_repeat 5 35 0 5 767 214 262 0 15 chr3R 23941799 23941865 -3963188 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 5 767 231 103 0 0 chr3R 23943163 23943202 -3961851 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 767 228 67 0 0 chr3R 23943694 23943724 -3961329 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 767 222 62 0 0 chr3R 23946099 23946131 -3958922 + (GCTG)n Simple_repeat Simple_repeat 1 32 0 5 767 234 245 56 56 chr3R 23947224 23947384 -3957669 + XDMR_DM Unknown Unknown 194 353 -7 5 767 299 195 67 50 chr3R 23947271 23947390 -3957663 - SAR_DM Satellite Satellite -1026 446 326 5 767 180 77 0 0 chr3R 23949292 23949318 -3955735 + (CCCA)n Simple_repeat Simple_repeat 4 29 0 5 767 200 34 0 33 chr3R 23950931 23950961 -3954092 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 767 210 284 12 0 chr3R 23951705 23951786 -3953267 + (CA)n Simple_repeat Simple_repeat 1 82 0 5 767 26 0 0 0 chr3R 23954488 23954514 -3950539 + AT_rich Low_complexity Low_complexity 1 26 0 5 767 248 226 0 0 chr3R 23954617 23954670 -3950383 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 767 205 246 0 0 chr3R 23956779 23956836 -3948217 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 767 25 0 0 0 chr3R 23957170 23957195 -3947858 + AT_rich Low_complexity Low_complexity 1 25 0 5 767 31 44 0 0 chr3R 23962048 23962093 -3942960 + AT_rich Low_complexity Low_complexity 1 45 0 5 767 180 0 0 0 chr3R 23962956 23962976 -3942077 + (TTCCG)n Simple_repeat Simple_repeat 1 20 0 5 767 23 0 0 0 chr3R 23963252 23963275 -3941778 + AT_rich Low_complexity Low_complexity 1 23 0 5 767 23 68 0 0 chr3R 23963319 23963363 -3941690 + AT_rich Low_complexity Low_complexity 1 44 0 5 767 28 0 0 0 chr3R 23968976 23969004 -3936049 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 215 224 0 0 chr3R 23970551 23970600 -3934453 + (CTCA)n Simple_repeat Simple_repeat 4 52 0 5 767 30 0 0 0 chr3R 23971066 23971096 -3933957 + AT_rich Low_complexity Low_complexity 1 30 0 5 767 33 43 0 0 chr3R 23972040 23972087 -3932966 + AT_rich Low_complexity Low_complexity 1 47 0 5 767 229 314 0 0 chr3R 23972450 23972520 -3932533 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 767 223 186 0 0 chr3R 23973019 23973062 -3931991 + T-rich Low_complexity Low_complexity 1 43 0 5 767 183 80 0 0 chr3R 23973373 23973398 -3931655 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 767 200 128 26 0 chr3R 23973807 23973846 -3931207 + (CAG)n Simple_repeat Simple_repeat 3 42 0 5 767 297 186 0 0 chr3R 23973879 23973949 -3931104 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 767 22 0 0 0 chr3R 23974776 23974798 -3930255 + AT_rich Low_complexity Low_complexity 1 22 0 5 767 208 227 0 0 chr3R 23977326 23977370 -3927683 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 767 211 309 0 0 chr3R 23977763 23977831 -3927222 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 767 183 184 0 0 chr3R 23978106 23978144 -3926909 + (CCCA)n Simple_repeat Simple_repeat 3 40 0 5 767 21 36 0 0 chr3R 23979487 23979515 -3925538 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 21 0 0 0 chr3R 23980559 23980580 -3924473 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 21 0 0 0 chr3R 23987080 23987101 -3917952 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 230 196 18 0 chr3R 23988926 23988982 -3916071 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 768 22 35 0 0 chr3R 23991918 23991947 -3913106 + AT_rich Low_complexity Low_complexity 1 29 0 5 768 23 0 0 0 chr3R 23992409 23992432 -3912621 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 219 36 0 0 chr3R 23998612 23998640 -3906413 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 768 423 100 0 0 chr3R 23999462 23999532 -3905521 + (TAA)n Simple_repeat Simple_repeat 3 72 0 5 768 3168 17 0 0 chr3R 23999532 23999888 -3905165 + MDG1_LTR LTR Gypsy 87 442 0 5 768 1047 0 0 0 chr3R 23999888 24000000 -3905053 + MDG1_I LTR Gypsy 1 112 -6484 5 768 56051 6 19 2 chr3R 24000000 24006389 -3898664 + MDG1_I LTR Gypsy 113 6799 -98 5 768 423 100 0 0 chr3R 24006393 24006463 -3898590 + (TAA)n Simple_repeat Simple_repeat 3 72 0 5 768 3168 17 0 0 chr3R 24006463 24006819 -3898234 + MDG1_LTR LTR Gypsy 87 442 0 5 768 26 0 0 0 chr3R 24010174 24010200 -3894853 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 233 231 25 13 chr3R 24012170 24012249 -3892804 + (TGGG)n Simple_repeat Simple_repeat 2 81 0 5 768 21 0 0 0 chr3R 24012629 24012650 -3892403 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 247 277 35 80 chr3R 24014923 24015123 -3889930 - SAR_DM Satellite Satellite -1067 405 215 5 768 21 36 0 0 chr3R 24018901 24018929 -3886124 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 213 306 0 0 chr3R 24020894 24020956 -3884097 + (CAA)n Simple_repeat Simple_repeat 3 64 0 5 768 21 0 0 0 chr3R 24024163 24024184 -3880869 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 22 0 0 0 chr3R 24026400 24026422 -3878631 + AT_rich Low_complexity Low_complexity 1 22 0 5 768 21 82 0 0 chr3R 24027176 24027225 -3877828 + AT_rich Low_complexity Low_complexity 1 49 0 5 768 22 0 0 0 chr3R 24028446 24028468 -3876585 + AT_rich Low_complexity Low_complexity 1 22 0 5 768 180 176 0 0 chr3R 24028666 24028700 -3876353 + (CCCTA)n Simple_repeat Simple_repeat 5 38 0 5 768 213 139 0 0 chr3R 24032524 24032567 -3872486 + (ACTG)n Simple_repeat Simple_repeat 3 45 0 5 768 189 147 0 0 chr3R 24035380 24035414 -3869639 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 768 192 40 0 0 chr3R 24045005 24045030 -3860023 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 768 21 36 0 0 chr3R 24051183 24051211 -3853842 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 22 0 0 0 chr3R 24053682 24053704 -3851349 + AT_rich Low_complexity Low_complexity 1 22 0 5 768 198 103 0 0 chr3R 24054373 24054402 -3850651 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 768 23 0 0 0 chr3R 24055382 24055405 -3849648 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 222 37 0 0 chr3R 24058596 24058623 -3846430 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 768 210 191 0 0 chr3R 24058978 24059025 -3846028 + (TTG)n Simple_repeat Simple_repeat 2 48 0 5 768 209 307 0 0 chr3R 24059173 24059248 -3845805 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 768 180 0 0 0 chr3R 24060290 24060310 -3844743 + (CTTTA)n Simple_repeat Simple_repeat 2 21 0 5 768 200 167 20 20 chr3R 24061835 24061884 -3843169 + (TGG)n Simple_repeat Simple_repeat 3 51 0 5 768 23 0 0 0 chr3R 24062644 24062667 -3842386 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 360 130 0 0 chr3R 24063526 24063595 -3841458 + (CAG)n Simple_repeat Simple_repeat 1 69 0 5 768 228 194 95 21 chr3R 24063613 24063708 -3841345 + ROO_I LTR Pao 628 729 -7527 5 768 232 143 0 41 chr3R 24063745 24063818 -3841235 + ROO_I LTR Pao 662 731 -7525 5 768 189 211 0 0 chr3R 24064658 24064710 -3840343 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 768 417 145 0 0 chr3R 24065243 24065319 -3839734 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 768 25 31 0 0 chr3R 24065371 24065403 -3839650 + AT_rich Low_complexity Low_complexity 1 32 0 5 768 23 0 0 0 chr3R 24065540 24065563 -3839490 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 189 121 0 0 chr3R 24066098 24066131 -3838922 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 768 198 0 0 0 chr3R 24067797 24067819 -3837234 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 768 189 0 0 0 chr3R 24068005 24068026 -3837027 + (CTA)n Simple_repeat Simple_repeat 1 21 0 5 768 26 0 0 0 chr3R 24068696 24068722 -3836331 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 273 75 0 0 chr3R 24070771 24070811 -3834242 + (GAGTG)n Simple_repeat Simple_repeat 2 41 0 5 768 180 0 0 0 chr3R 24071893 24071913 -3833140 + (CAG)n Simple_repeat Simple_repeat 2 21 0 5 768 26 0 0 0 chr3R 24073255 24073281 -3831772 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 273 75 0 0 chr3R 24075330 24075370 -3829683 + (GAGTG)n Simple_repeat Simple_repeat 2 41 0 5 768 180 0 0 0 chr3R 24076487 24076507 -3828546 + (CAG)n Simple_repeat Simple_repeat 2 21 0 5 768 26 0 0 0 chr3R 24078575 24078601 -3826452 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 209 176 0 0 chr3R 24078901 24078935 -3826118 + (TTTCG)n Simple_repeat Simple_repeat 1 34 0 5 768 19328 7 1 0 chr3R 24079116 24081197 -3823856 + LINEJ1_DM LINE Jockey 8 2089 -2931 5 768 3036 0 0 17 chr3R 24081196 24081550 -3823503 + LINEJ1_DM LINE Jockey 4673 5020 0 5 768 21 0 0 0 chr3R 24081550 24081571 -3823482 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 202 219 0 0 chr3R 24084209 24084250 -3820803 + (TATG)n Simple_repeat Simple_repeat 1 41 0 5 768 212 250 17 0 chr3R 24085629 24085689 -3819364 + (CATCC)n Simple_repeat Simple_repeat 5 65 0 5 768 28 0 0 0 chr3R 24087950 24087978 -3817075 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 24 32 0 0 chr3R 24089128 24089159 -3815894 + AT_rich Low_complexity Low_complexity 1 31 0 5 768 21 0 0 0 chr3R 24091182 24091203 -3813850 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 208 174 22 0 chr3R 24091640 24091686 -3813367 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 768 198 0 0 0 chr3R 24093591 24093613 -3811440 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 768 195 100 0 0 chr3R 24095981 24096011 -3809042 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 768 214 162 0 0 chr3R 24097315 24097352 -3807701 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 768 25 0 0 0 chr3R 24100351 24100376 -3804677 + AT_rich Low_complexity Low_complexity 1 25 0 5 768 322 172 0 0 chr3R 24100696 24100760 -3804293 - ROO_I LTR Pao -7547 709 646 5 768 444 156 33 0 chr3R 24111795 24111885 -3793168 - ROO_I LTR Pao -7513 743 651 5 768 204 294 0 0 chr3R 24113513 24113564 -3791489 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 768 23 0 0 0 chr3R 24113836 24113859 -3791194 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 21 36 0 0 chr3R 24114234 24114262 -3790791 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 21 36 0 0 chr3R 24115052 24115080 -3789973 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 27 0 0 0 chr3R 24115175 24115202 -3789851 + AT_rich Low_complexity Low_complexity 1 27 0 5 768 204 209 0 0 chr3R 24116448 24116491 -3788562 + (CCCA)n Simple_repeat Simple_repeat 3 45 0 5 769 185 0 0 39 chr3R 24119719 24119745 -3785308 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 5 769 21 57 0 0 chr3R 24121283 24121318 -3783735 + AT_rich Low_complexity Low_complexity 1 35 0 5 769 191 136 0 43 chr3R 24122303 24122349 -3782704 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 769 210 250 0 16 chr3R 24125719 24125780 -3779273 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 769 218 171 0 0 chr3R 24127238 24127273 -3777780 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 769 3079 3 0 11 chr3R 24127901 24128256 -3776797 - LINEJ1_DM LINE Jockey 0 5020 4670 5 769 249 210 0 0 chr3R 24133810 24133872 -3771181 + (TGGG)n Simple_repeat Simple_repeat 3 64 0 5 769 251 204 0 0 chr3R 24138874 24138928 -3766125 + (GCTG)n Simple_repeat Simple_repeat 3 56 0 5 769 203 61 0 29 chr3R 24140258 24140292 -3764761 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 769 204 139 28 0 chr3R 24140700 24140736 -3764317 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 769 23 33 0 0 chr3R 24142142 24142172 -3762881 + AT_rich Low_complexity Low_complexity 1 30 0 5 769 22 35 0 0 chr3R 24143961 24143990 -3761063 + AT_rich Low_complexity Low_complexity 1 29 0 5 769 234 156 0 0 chr3R 24144027 24144072 -3760981 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 769 26 0 0 0 chr3R 24144078 24144104 -3760949 + AT_rich Low_complexity Low_complexity 1 26 0 5 769 279 54 0 0 chr3R 24145553 24145590 -3759463 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 769 251 239 0 0 chr3R 24146337 24146408 -3758645 - ROO_I LTR Pao -7528 728 658 5 769 239 173 11 69 chr3R 24146613 24146700 -3758353 - ROO_I LTR Pao -7532 724 643 5 769 195 146 0 0 chr3R 24148254 24148295 -3756758 + (TGG)n Simple_repeat Simple_repeat 3 43 0 5 769 224 316 7 19 chr3R 24150113 24150268 -3754785 + (CTG)n Simple_repeat Simple_repeat 2 154 0 5 769 24 0 0 0 chr3R 24150866 24150890 -3754163 + AT_rich Low_complexity Low_complexity 1 24 0 5 769 355 149 0 60 chr3R 24151233 24151333 -3753720 - ROO_I LTR Pao -7522 734 641 5 769 292 200 11 32 chr3R 24151334 24151427 -3753626 + (TTG)n Simple_repeat Simple_repeat 2 92 0 5 769 240 35 0 0 chr3R 24155036 24155065 -3749988 + (CATA)n Simple_repeat Simple_repeat 4 32 0 5 769 29 0 0 0 chr3R 24157169 24157198 -3747855 + AT_rich Low_complexity Low_complexity 1 29 0 5 769 201 162 0 0 chr3R 24160078 24160115 -3744938 + (TGG)n Simple_repeat Simple_repeat 2 38 0 5 769 24 100 0 0 chr3R 24162458 24162538 -3742515 + AT_rich Low_complexity Low_complexity 1 80 0 5 769 27 73 0 0 chr3R 24165618 24165673 -3739380 + AT_rich Low_complexity Low_complexity 1 55 0 5 769 29 28 0 0 chr3R 24165956 24165992 -3739061 + AT_rich Low_complexity Low_complexity 1 36 0 5 769 270 95 0 0 chr3R 24167773 24167815 -3737238 + (CAA)n Simple_repeat Simple_repeat 3 44 0 5 769 50 0 0 0 chr3R 24171044 24171094 -3733959 + AT_rich Low_complexity Low_complexity 1 50 0 5 769 31 26 0 0 chr3R 24171422 24171460 -3733593 + AT_rich Low_complexity Low_complexity 1 38 0 5 769 22 0 0 0 chr3R 24173657 24173679 -3731374 + AT_rich Low_complexity Low_complexity 1 22 0 5 769 220 260 0 0 chr3R 24174016 24174066 -3730987 + G-rich Low_complexity Low_complexity 3 52 0 5 769 25 31 0 0 chr3R 24174745 24174777 -3730276 + AT_rich Low_complexity Low_complexity 1 32 0 5 769 23 33 0 0 chr3R 24179637 24179667 -3725386 + AT_rich Low_complexity Low_complexity 1 30 0 5 769 249 57 0 0 chr3R 24180663 24180698 -3724355 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 769 180 0 0 0 chr3R 24181721 24181741 -3723312 + (CCTA)n Simple_repeat Simple_repeat 4 23 0 5 769 265 247 26 0 chr3R 24182152 24182229 -3722824 + (CTG)n Simple_repeat Simple_repeat 2 80 0 5 769 192 77 0 0 chr3R 24183217 24183243 -3721810 + (CAAAC)n Simple_repeat Simple_repeat 1 26 0 5 769 33 0 0 0 chr3R 24186773 24186806 -3718247 + AT_rich Low_complexity Low_complexity 1 33 0 5 769 21 0 0 0 chr3R 24187476 24187497 -3717556 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 191 103 26 0 chr3R 24193543 24193582 -3711471 + (CAGGC)n Simple_repeat Simple_repeat 5 44 0 5 769 237 65 0 0 chr3R 24194364 24194395 -3710658 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 769 22 35 0 0 chr3R 24195911 24195940 -3709113 + AT_rich Low_complexity Low_complexity 1 29 0 5 769 201 159 0 0 chr3R 24200357 24200401 -3704652 + A-rich Low_complexity Low_complexity 1 44 0 5 769 310 146 0 24 chr3R 24203240 24203324 -3701729 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 769 228 130 0 0 chr3R 24203855 24203901 -3701152 + (CGAAT)n Simple_repeat Simple_repeat 5 50 0 5 769 201 154 0 0 chr3R 24204502 24204541 -3700512 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 769 22 0 0 0 chr3R 24207213 24207235 -3697818 + AT_rich Low_complexity Low_complexity 1 22 0 5 769 231 125 0 0 chr3R 24207915 24207955 -3697098 + (CAGAC)n Simple_repeat Simple_repeat 4 43 0 5 769 189 107 0 0 chr3R 24208984 24209012 -3696041 + (TTCTG)n Simple_repeat Simple_repeat 3 30 0 5 769 40 59 0 0 chr3R 24211546 24211614 -3693439 + AT_rich Low_complexity Low_complexity 1 68 0 5 769 219 36 0 0 chr3R 24214226 24214254 -3690799 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 769 225 0 0 0 chr3R 24214340 24214365 -3690688 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 5 769 212 143 0 0 chr3R 24217107 24217142 -3687911 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 769 21 0 0 0 chr3R 24222560 24222581 -3682472 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 402 121 0 0 chr3R 24223104 24223170 -3681883 + (GA)n Simple_repeat Simple_repeat 1 66 0 5 769 25 0 0 0 chr3R 24224052 24224077 -3680976 + AT_rich Low_complexity Low_complexity 1 25 0 5 769 204 111 0 0 chr3R 24225721 24225757 -3679296 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 769 204 205 0 0 chr3R 24227313 24227352 -3677701 + (TCG)n Simple_repeat Simple_repeat 1 39 0 5 769 255 217 0 0 chr3R 24228070 24228130 -3676923 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 769 219 36 0 0 chr3R 24228251 24228279 -3676774 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 769 207 100 0 0 chr3R 24231082 24231112 -3673941 + (CACCAT)n Simple_repeat Simple_repeat 3 32 0 5 769 225 214 18 0 chr3R 24231615 24231671 -3673382 + T-rich Low_complexity Low_complexity 3 59 0 5 769 195 42 0 0 chr3R 24232121 24232145 -3672908 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 769 22 56 0 0 chr3R 24233257 24233293 -3671760 + AT_rich Low_complexity Low_complexity 1 36 0 5 769 180 77 0 0 chr3R 24234972 24234998 -3670055 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 769 234 0 0 0 chr3R 24236082 24236108 -3668945 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 769 276 91 0 0 chr3R 24237279 24237323 -3667730 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 769 248 137 57 38 chr3R 24237813 24237866 -3667187 + (CGAGT)n Simple_repeat Simple_repeat 2 55 0 5 769 180 111 0 0 chr3R 24238856 24238883 -3666170 + (TTTTTA)n Simple_repeat Simple_repeat 6 32 0 5 769 21 0 0 0 chr3R 24239317 24239338 -3665715 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 21 0 0 0 chr3R 24241084 24241105 -3663948 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 203 300 0 0 chr3R 24243039 24243099 -3661954 + CT-rich Low_complexity Low_complexity 2 61 0 5 769 234 143 0 0 chr3R 24245879 24245928 -3659125 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 769 219 139 0 0 chr3R 24246098 24246134 -3658919 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 5 769 23 0 0 0 chr3R 24247762 24247785 -3657268 + AT_rich Low_complexity Low_complexity 1 23 0 5 770 186 143 0 0 chr3R 24250413 24250448 -3654605 + (A)n Simple_repeat Simple_repeat 1 35 0 5 770 183 129 0 0 chr3R 24250799 24250830 -3654223 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 770 210 174 0 0 chr3R 24253104 24253150 -3651903 + (TTCGG)n Simple_repeat Simple_repeat 4 49 0 5 770 27 29 0 0 chr3R 24261660 24261694 -3643359 + AT_rich Low_complexity Low_complexity 1 34 0 5 770 201 39 0 0 chr3R 24267266 24267292 -3637761 + (T)n Simple_repeat Simple_repeat 1 26 0 5 770 214 241 0 0 chr3R 24270235 24270289 -3634764 + (CCCA)n Simple_repeat Simple_repeat 3 56 0 5 770 31 44 0 0 chr3R 24270769 24270814 -3634239 + AT_rich Low_complexity Low_complexity 1 45 0 5 770 285 75 0 0 chr3R 24272012 24272052 -3633001 + (CAGAC)n Simple_repeat Simple_repeat 5 44 0 5 770 242 211 0 17 chr3R 24273429 24273487 -3631566 + (CAG)n Simple_repeat Simple_repeat 3 59 0 5 770 21 0 0 0 chr3R 24274586 24274607 -3630446 + AT_rich Low_complexity Low_complexity 1 21 0 5 770 203 175 0 17 chr3R 24275594 24275652 -3629401 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 770 180 0 0 0 chr3R 24279211 24279231 -3625822 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 770 189 107 0 0 chr3R 24282404 24282432 -3622621 + (TCCG)n Simple_repeat Simple_repeat 1 28 0 5 770 28 71 0 0 chr3R 24283161 24283217 -3621836 + AT_rich Low_complexity Low_complexity 1 56 0 5 770 201 39 0 0 chr3R 24283951 24283977 -3621076 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 770 25 0 0 0 chr3R 24286308 24286333 -3618720 + AT_rich Low_complexity Low_complexity 1 25 0 5 770 210 139 0 0 chr3R 24287263 24287299 -3617754 + (GTCTG)n Simple_repeat Simple_repeat 5 40 0 5 770 186 43 0 0 chr3R 24290631 24290654 -3614399 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 770 206 319 11 11 chr3R 24292725 24292817 -3612236 + (TG)n Simple_repeat Simple_repeat 1 92 0 5 770 31 26 0 0 chr3R 24294269 24294307 -3610746 + AT_rich Low_complexity Low_complexity 1 38 0 5 770 219 244 13 13 chr3R 24295084 24295163 -3609890 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 770 207 0 0 0 chr3R 24298226 24298249 -3606804 + (TTTAG)n Simple_repeat Simple_repeat 1 23 0 5 770 21 0 0 0 chr3R 24299566 24299587 -3605466 + AT_rich Low_complexity Low_complexity 1 21 0 5 770 204 40 0 0 chr3R 24300799 24300824 -3604229 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 770 21 0 0 0 chr3R 24305226 24305247 -3599806 + AT_rich Low_complexity Low_complexity 1 21 0 5 770 22 0 0 0 chr3R 24309101 24309123 -3595930 + AT_rich Low_complexity Low_complexity 1 22 0 5 770 237 220 0 0 chr3R 24312506 24312556 -3592497 + (GGTTG)n Simple_repeat Simple_repeat 1 50 0 5 770 201 129 0 0 chr3R 24316075 24316106 -3588947 + (CTG)n Simple_repeat Simple_repeat 1 31 0 5 770 211 200 0 0 chr3R 24327207 24327242 -3577811 + (TATG)n Simple_repeat Simple_repeat 3 37 0 5 770 195 42 0 0 chr3R 24327343 24327367 -3577686 + (TTTCG)n Simple_repeat Simple_repeat 3 26 0 5 770 24 0 0 0 chr3R 24327410 24327434 -3577619 + AT_rich Low_complexity Low_complexity 1 24 0 5 770 31 0 0 0 chr3R 24333258 24333289 -3571764 + AT_rich Low_complexity Low_complexity 1 31 0 5 770 228 163 23 0 chr3R 24335033 24335076 -3569977 + GA-rich Low_complexity Low_complexity 1 44 0 5 770 33 0 0 0 chr3R 24336120 24336153 -3568900 + AT_rich Low_complexity Low_complexity 1 33 0 5 770 26 0 0 0 chr3R 24341750 24341776 -3563277 + AT_rich Low_complexity Low_complexity 1 26 0 5 770 24 67 0 0 chr3R 24347210 24347255 -3557798 + AT_rich Low_complexity Low_complexity 1 45 0 5 770 183 42 0 0 chr3R 24360698 24360722 -3544331 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 770 183 80 0 0 chr3R 24360734 24360759 -3544294 + (ATG)n Simple_repeat Simple_repeat 1 25 0 5 770 348 43 0 0 chr3R 24365733 24365779 -3539274 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 770 245 190 63 0 chr3R 24366089 24366168 -3538885 + (CAG)n Simple_repeat Simple_repeat 2 85 0 5 770 234 91 0 0 chr3R 24366527 24366560 -3538493 + (CGATG)n Simple_repeat Simple_repeat 4 36 0 5 770 208 143 0 0 chr3R 24370610 24370645 -3534408 + (TAAAAA)n Simple_repeat Simple_repeat 3 37 0 5 770 30 27 0 0 chr3R 24370774 24370811 -3534242 + AT_rich Low_complexity Low_complexity 1 37 0 5 770 28 0 0 0 chr3R 24372488 24372516 -3532537 + AT_rich Low_complexity Low_complexity 1 28 0 5 770 294 29 0 0 chr3R 24373178 24373213 -3531840 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 770 270 157 0 0 chr3R 24376412 24376463 -3528590 + (CACCAT)n Simple_repeat Simple_repeat 3 53 0 5 770 186 103 0 0 chr3R 24376805 24376834 -3528219 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 5 771 192 40 0 0 chr3R 24380137 24380162 -3524891 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 771 21 0 0 0 chr3R 24382241 24382262 -3522791 + AT_rich Low_complexity Low_complexity 1 21 0 5 771 24 32 0 0 chr3R 24383542 24383573 -3521480 + AT_rich Low_complexity Low_complexity 1 31 0 5 771 198 0 0 0 chr3R 24384840 24384862 -3520191 + (CGA)n Simple_repeat Simple_repeat 3 24 0 5 771 22 0 0 0 chr3R 24385264 24385286 -3519767 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 206 105 26 0 chr3R 24385785 24385823 -3519230 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 771 213 39 0 0 chr3R 24387219 24387245 -3517808 + (TGG)n Simple_repeat Simple_repeat 2 27 0 5 771 224 220 0 20 chr3R 24387355 24387406 -3517647 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 771 201 154 0 0 chr3R 24389192 24389231 -3515822 + T-rich Low_complexity Low_complexity 1 39 0 5 771 252 149 0 0 chr3R 24390888 24390935 -3514118 + (CTG)n Simple_repeat Simple_repeat 3 49 0 5 771 290 236 0 14 chr3R 24391867 24391940 -3513113 - ROO_I LTR Pao -7531 725 654 5 771 243 0 0 0 chr3R 24396877 24396904 -3508149 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 771 204 184 0 0 chr3R 24399111 24399160 -3505893 + (CAA)n Simple_repeat Simple_repeat 2 50 0 5 771 223 200 0 16 chr3R 24403007 24403090 -3501963 + (ATGGTG)n Simple_repeat Simple_repeat 1 81 0 5 771 22 35 0 0 chr3R 24403467 24403496 -3501557 + AT_rich Low_complexity Low_complexity 1 29 0 5 771 195 100 0 0 chr3R 24404010 24404040 -3501013 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 5 771 211 211 0 0 chr3R 24405233 24405285 -3499768 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 771 215 316 0 30 chr3R 24406271 24406372 -3498681 + (GGCTG)n Simple_repeat Simple_repeat 4 101 0 5 771 22 0 0 0 chr3R 24406768 24406790 -3498263 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 210 226 0 0 chr3R 24406869 24406922 -3498131 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 771 22 56 0 0 chr3R 24407023 24407059 -3497994 + AT_rich Low_complexity Low_complexity 1 36 0 5 771 281 158 37 0 chr3R 24408387 24408469 -3496584 - ROO_I LTR Pao -7525 731 647 5 771 235 218 0 0 chr3R 24408479 24408534 -3496519 + (CCCGAA)n Simple_repeat Simple_repeat 4 58 0 5 771 465 138 0 0 chr3R 24408598 24408692 -3496361 + (CTG)n Simple_repeat Simple_repeat 3 96 0 5 771 214 158 0 0 chr3R 24410156 24410194 -3494859 + (CCG)n Simple_repeat Simple_repeat 2 39 0 5 771 22 0 0 0 chr3R 24410656 24410678 -3494375 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 290 111 31 62 chr3R 24410822 24410918 -3494135 - ROO_I LTR Pao -7525 731 639 5 771 221 219 0 0 chr3R 24411044 24411085 -3493968 + (CGG)n Simple_repeat Simple_repeat 1 41 0 5 771 252 122 0 0 chr3R 24411623 24411664 -3493389 + (GCTTG)n Simple_repeat Simple_repeat 3 43 0 5 771 269 260 0 0 chr3R 24412110 24412183 -3492870 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 771 22 0 0 0 chr3R 24412797 24412819 -3492234 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 182 108 0 51 chr3R 24412974 24413013 -3492040 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 5 771 21 36 0 0 chr3R 24413426 24413454 -3491599 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 24 0 0 0 chr3R 24413806 24413830 -3491223 + AT_rich Low_complexity Low_complexity 1 24 0 5 771 180 0 0 0 chr3R 24413849 24413869 -3491184 + (A)n Simple_repeat Simple_repeat 1 20 0 5 771 25 31 0 0 chr3R 24415357 24415389 -3489664 + AT_rich Low_complexity Low_complexity 1 32 0 5 771 207 200 0 0 chr3R 24415884 24415924 -3489129 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 5 771 21 0 0 0 chr3R 24417168 24417189 -3487864 + AT_rich Low_complexity Low_complexity 1 21 0 5 771 298 265 0 0 chr3R 24423955 24424038 -3481015 + (CAT)n Simple_repeat Simple_repeat 3 85 0 5 771 21 0 0 0 chr3R 24425353 24425374 -3479679 + AT_rich Low_complexity Low_complexity 1 21 0 5 771 398 191 68 60 chr3R 24425798 24425915 -3479138 - LINEJ1_DM LINE Jockey -30 4990 4873 5 771 183 184 0 0 chr3R 24428799 24428837 -3476216 + (TGG)n Simple_repeat Simple_repeat 2 39 0 5 771 183 42 0 0 chr3R 24430035 24430059 -3474994 + (CAGTG)n Simple_repeat Simple_repeat 1 24 0 5 771 22 35 0 0 chr3R 24434638 24434667 -3470386 + AT_rich Low_complexity Low_complexity 1 29 0 5 771 24 0 0 0 chr3R 24454890 24454914 -3450139 + AT_rich Low_complexity Low_complexity 1 24 0 5 771 218 200 0 0 chr3R 24456775 24456825 -3448228 + T-rich Low_complexity Low_complexity 1 50 0 5 771 215 200 18 18 chr3R 24460236 24460292 -3444761 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 771 360 229 92 81 chr3R 24461780 24461965 -3443088 - DNAREP1_DM LINE Penelope -352 242 56 5 771 21 36 0 0 chr3R 24464595 24464623 -3440430 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 183 80 0 0 chr3R 24466578 24466603 -3438450 + (TAAAAA)n Simple_repeat Simple_repeat 5 29 0 5 771 207 167 0 0 chr3R 24469079 24469121 -3435932 + (GTTTG)n Simple_repeat Simple_repeat 2 43 0 5 771 180 77 0 0 chr3R 24471108 24471134 -3433919 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 771 180 176 0 0 chr3R 24473078 24473112 -3431941 + (CCCGG)n Simple_repeat Simple_repeat 2 35 0 5 771 28 0 0 0 chr3R 24473687 24473715 -3431338 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 210 216 0 0 chr3R 24478916 24478953 -3426100 + (CTCGG)n Simple_repeat Simple_repeat 2 38 0 5 771 207 0 0 0 chr3R 24481582 24481605 -3423448 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 5 771 218 56 28 0 chr3R 24482171 24482207 -3422846 + (TAA)n Simple_repeat Simple_repeat 3 39 0 5 771 23 0 0 0 chr3R 24484781 24484804 -3420249 + AT_rich Low_complexity Low_complexity 1 23 0 5 771 22 35 0 0 chr3R 24487065 24487094 -3417959 + AT_rich Low_complexity Low_complexity 1 29 0 5 771 29 47 0 0 chr3R 24488146 24488189 -3416864 + AT_rich Low_complexity Low_complexity 1 43 0 5 771 213 150 25 0 chr3R 24488626 24488666 -3416387 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 5 771 186 43 0 0 chr3R 24489143 24489166 -3415887 + (AACTG)n Simple_repeat Simple_repeat 4 26 0 5 771 282 125 0 0 chr3R 24489920 24489968 -3415085 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 771 195 42 0 0 chr3R 24490893 24490917 -3414136 + (TTA)n Simple_repeat Simple_repeat 3 26 0 5 771 241 213 16 16 chr3R 24491522 24491584 -3413469 + A-rich Low_complexity Low_complexity 1 62 0 5 771 21 36 0 0 chr3R 24493867 24493895 -3411158 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 27 29 0 0 chr3R 24498259 24498293 -3406760 + AT_rich Low_complexity Low_complexity 1 34 0 5 771 23 0 0 0 chr3R 24500310 24500333 -3404720 + AT_rich Low_complexity Low_complexity 1 23 0 5 771 212 171 0 0 chr3R 24508521 24508562 -3396491 + (CAT)n Simple_repeat Simple_repeat 1 41 0 5 772 30 0 0 0 chr3R 24515831 24515861 -3389192 + AT_rich Low_complexity Low_complexity 1 30 0 5 772 37 0 0 0 chr3R 24518501 24518538 -3386515 + AT_rich Low_complexity Low_complexity 1 37 0 5 772 25 31 0 0 chr3R 24519640 24519672 -3385381 + AT_rich Low_complexity Low_complexity 1 32 0 5 772 186 71 0 0 chr3R 24526614 24526642 -3378411 + (CAG)n Simple_repeat Simple_repeat 2 29 0 5 772 201 147 0 0 chr3R 24526878 24526912 -3378141 + (CGGA)n Simple_repeat Simple_repeat 3 36 0 5 772 285 98 0 0 chr3R 24527302 24527343 -3377710 + (ATG)n Simple_repeat Simple_repeat 3 43 0 5 772 25 0 0 0 chr3R 24528454 24528479 -3376574 + AT_rich Low_complexity Low_complexity 1 25 0 5 772 200 193 53 0 chr3R 24529140 24529197 -3375856 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 772 195 162 0 0 chr3R 24529309 24529346 -3375707 + (TTG)n Simple_repeat Simple_repeat 2 38 0 5 772 221 191 0 21 chr3R 24530785 24530833 -3374220 + (CAA)n Simple_repeat Simple_repeat 2 48 0 5 772 186 133 0 0 chr3R 24531041 24531071 -3373982 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 772 243 133 0 0 chr3R 24534318 24534363 -3370690 + (CAG)n Simple_repeat Simple_repeat 1 45 0 5 772 36 0 0 0 chr3R 24535693 24535729 -3369324 + AT_rich Low_complexity Low_complexity 1 36 0 5 772 21 71 0 0 chr3R 24538058 24538100 -3366953 + AT_rich Low_complexity Low_complexity 1 42 0 5 772 21 0 0 0 chr3R 24539144 24539165 -3365888 + AT_rich Low_complexity Low_complexity 1 21 0 5 772 285 75 0 0 chr3R 24542932 24542972 -3362081 + (TCCG)n Simple_repeat Simple_repeat 4 43 0 5 772 289 159 14 14 chr3R 24543042 24543112 -3361941 - ROO_I LTR Pao -7530 726 657 5 772 218 122 24 0 chr3R 24548491 24548532 -3356521 + (TTGG)n Simple_repeat Simple_repeat 1 42 0 5 772 220 191 0 0 chr3R 24549828 24549870 -3355183 + (TTCGGG)n Simple_repeat Simple_repeat 2 43 0 5 772 238 264 0 0 chr3R 24559117 24559170 -3345883 + (CAG)n Simple_repeat Simple_repeat 3 55 0 5 772 207 105 0 73 chr3R 24559334 24559375 -3345678 + (CGATA)n Simple_repeat Simple_repeat 2 39 0 5 772 21 0 0 0 chr3R 24564803 24564824 -3340229 + AT_rich Low_complexity Low_complexity 1 21 0 5 772 23 33 0 0 chr3R 24565963 24565993 -3339060 + AT_rich Low_complexity Low_complexity 1 30 0 5 772 3961 7 0 0 chr3R 24584062 24584490 -3320563 + ROO_LTR LTR Pao 1 428 0 5 772 31148 1 0 0 chr3R 24584509 24587949 -3317104 + ROO_I LTR Pao 1757 5196 -3060 5 772 11302 4 9 0 chr3R 24587936 24589193 -3315860 + ROO_I LTR Pao 6988 8256 0 5 772 3961 7 0 0 chr3R 24589193 24589621 -3315432 + ROO_LTR LTR Pao 1 428 0 5 772 3696 0 0 2 chr3R 24589691 24590094 -3314959 - STALKER4_LTR LTR Gypsy 0 402 1 5 772 57898 9 0 4 chr3R 24590094 24596647 -3308406 - STALKER4_I LTR Gypsy 0 6530 1 5 772 3696 0 0 2 chr3R 24596647 24597050 -3308003 - STALKER4_LTR LTR Gypsy 0 402 1 5 772 255 61 0 0 chr3R 24599125 24599158 -3305895 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 772 212 86 0 28 chr3R 24601538 24601574 -3303479 + (CTG)n Simple_repeat Simple_repeat 1 35 0 5 772 210 91 0 0 chr3R 24601621 24601654 -3303399 + (TCCCG)n Simple_repeat Simple_repeat 2 34 0 5 772 211 220 0 0 chr3R 24601803 24601853 -3303200 + (GTTTG)n Simple_repeat Simple_repeat 3 52 0 5 772 21 0 0 0 chr3R 24602463 24602484 -3302569 + AT_rich Low_complexity Low_complexity 1 21 0 5 772 218 32 32 0 chr3R 24603194 24603225 -3301828 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 772 216 97 0 0 chr3R 24603834 24603865 -3301188 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 772 219 173 0 0 chr3R 24604455 24604507 -3300546 + A-rich Low_complexity Low_complexity 1 52 0 5 772 219 217 0 0 chr3R 24605851 24605911 -3299142 + T-rich Low_complexity Low_complexity 1 60 0 5 772 182 160 0 20 chr3R 24606404 24606455 -3298598 + (CATCC)n Simple_repeat Simple_repeat 1 50 0 5 772 279 0 0 0 chr3R 24610711 24610742 -3294311 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 5 772 240 186 0 0 chr3R 24612720 24612779 -3292274 + (ATG)n Simple_repeat Simple_repeat 1 59 0 5 772 25 0 0 0 chr3R 24613770 24613795 -3291258 + AT_rich Low_complexity Low_complexity 1 25 0 5 772 46619 5 0 1 chr3R 24618647 24623662 -3281391 + LINEJ1_DM LINE Jockey 12 5020 0 5 772 189 0 0 0 chr3R 24623662 24623683 -3281370 + (A)n Simple_repeat Simple_repeat 1 21 0 5 772 207 269 0 0 chr3R 24624587 24624639 -3280414 + GA-rich Low_complexity Low_complexity 4 55 0 5 772 198 71 0 0 chr3R 24629295 24629323 -3275730 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 5 772 30 27 0 0 chr3R 24634419 24634456 -3270597 + AT_rich Low_complexity Low_complexity 1 37 0 5 772 201 121 0 0 chr3R 24635151 24635184 -3269869 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 772 22 0 0 0 chr3R 24637502 24637524 -3267529 + AT_rich Low_complexity Low_complexity 1 22 0 5 772 258 214 0 0 chr3R 24639350 24639434 -3265619 + GA-rich Low_complexity Low_complexity 5 88 0 5 772 197 128 0 21 chr3R 24641381 24641429 -3263624 + (GGAGAA)n Simple_repeat Simple_repeat 2 48 0 5 773 268 238 24 0 chr3R 24643618 24643702 -3261351 - ROO_I LTR Pao -7524 732 647 5 773 29 60 0 0 chr3R 24645731 24645781 -3259272 + AT_rich Low_complexity Low_complexity 1 50 0 5 773 22 0 0 0 chr3R 24646458 24646480 -3258573 + AT_rich Low_complexity Low_complexity 1 22 0 5 773 253 232 0 0 chr3R 24651619 24651675 -3253378 + (TGG)n Simple_repeat Simple_repeat 2 57 0 5 773 198 103 0 0 chr3R 24654032 24654061 -3250992 + (CACAG)n Simple_repeat Simple_repeat 1 29 0 5 773 189 237 0 0 chr3R 24661163 24661222 -3243831 + (TTG)n Simple_repeat Simple_repeat 1 59 0 5 773 195 42 0 0 chr3R 24661788 24661812 -3243241 + (ATG)n Simple_repeat Simple_repeat 1 24 0 5 773 24 32 0 0 chr3R 24670681 24670712 -3234341 + AT_rich Low_complexity Low_complexity 1 31 0 5 773 22 35 0 0 chr3R 24672473 24672502 -3232551 + AT_rich Low_complexity Low_complexity 1 29 0 5 773 294 95 0 0 chr3R 24672794 24672836 -3232217 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 5 773 234 0 0 0 chr3R 24674597 24674623 -3230430 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 5 773 186 43 0 0 chr3R 24676196 24676219 -3228834 + (TTCCG)n Simple_repeat Simple_repeat 2 24 0 5 773 27 73 0 0 chr3R 24676833 24676888 -3228165 + AT_rich Low_complexity Low_complexity 1 55 0 5 773 313 205 11 33 chr3R 24677219 24677310 -3227743 + ROO_I LTR Pao 646 734 -7522 5 773 202 204 0 0 chr3R 24677540 24677584 -3227469 + (CCA)n Simple_repeat Simple_repeat 2 45 0 5 773 21 36 0 0 chr3R 24677895 24677923 -3227130 + AT_rich Low_complexity Low_complexity 1 28 0 5 773 23 78 0 0 chr3R 24679836 24679887 -3225166 + AT_rich Low_complexity Low_complexity 1 51 0 5 773 183 156 0 0 chr3R 24681931 24681963 -3223090 + (CGGA)n Simple_repeat Simple_repeat 2 33 0 5 773 303 104 0 0 chr3R 24687176 24687224 -3217829 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 773 44 0 0 0 chr3R 24695568 24695612 -3209441 + AT_rich Low_complexity Low_complexity 1 44 0 5 773 21 36 0 0 chr3R 24695935 24695963 -3209090 + AT_rich Low_complexity Low_complexity 1 28 0 5 773 228 238 0 16 chr3R 24712147 24712211 -3192842 + (CTG)n Simple_repeat Simple_repeat 1 63 0 5 773 207 156 0 0 chr3R 24712601 24712633 -3192420 + (CGG)n Simple_repeat Simple_repeat 1 32 0 5 773 211 295 12 25 chr3R 24714925 24715005 -3190048 + (CAG)n Simple_repeat Simple_repeat 2 80 0 5 773 282 208 0 0 chr3R 24715207 24715260 -3189793 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 773 311 296 0 20 chr3R 24719217 24719317 -3185736 + (CAG)n Simple_repeat Simple_repeat 3 100 0 5 773 242 164 18 18 chr3R 24720971 24721027 -3184026 + T-rich Low_complexity Low_complexity 5 60 0 5 773 23 33 0 0 chr3R 24723742 24723772 -3181281 + AT_rich Low_complexity Low_complexity 1 30 0 5 773 206 62 31 0 chr3R 24729404 24729436 -3175617 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 773 224 244 0 35 chr3R 24731866 24731951 -3173102 + GA-rich Low_complexity Low_complexity 3 84 0 5 773 225 0 0 0 chr3R 24735765 24735790 -3169263 + (CAG)n Simple_repeat Simple_repeat 2 26 0 5 773 265 240 0 0 chr3R 24735944 24736019 -3169034 + ROO_I LTR Pao 652 726 -7530 5 773 254 196 20 0 chr3R 24736391 24736442 -3168611 + TART_B1 LINE telomeric 144 195 -10459 5 773 258 97 0 88 chr3R 24736401 24736469 -3168584 + ROO_I LTR Pao 653 714 -7542 5 773 229 190 138 12 chr3R 24736741 24736821 -3168232 + ROO_I LTR Pao 690 779 -7477 5 773 216 184 0 0 chr3R 24738710 24738748 -3166305 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 773 23 0 0 0 chr3R 24738919 24738942 -3166111 + AT_rich Low_complexity Low_complexity 1 23 0 5 773 207 156 0 0 chr3R 24740390 24740422 -3164631 + (CCG)n Simple_repeat Simple_repeat 3 34 0 5 773 234 301 0 47 chr3R 24742998 24743127 -3161926 + (CAG)n Simple_repeat Simple_repeat 2 124 0 5 773 180 135 0 0 chr3R 24743346 24743383 -3161670 + (CCA)n Simple_repeat Simple_repeat 2 38 0 5 773 22 0 0 0 chr3R 24744426 24744448 -3160605 + AT_rich Low_complexity Low_complexity 1 22 0 5 773 226 140 11 85 chr3R 24744603 24744697 -3160356 + (ATG)n Simple_repeat Simple_repeat 1 87 0 5 773 245 213 0 0 chr3R 24744861 24744908 -3160145 + T-rich Low_complexity Low_complexity 1 47 0 5 773 26 50 0 0 chr3R 24748375 24748415 -3156638 + AT_rich Low_complexity Low_complexity 1 40 0 5 773 21 36 0 0 chr3R 24750770 24750798 -3154255 + AT_rich Low_complexity Low_complexity 1 28 0 5 773 23 33 0 0 chr3R 24751391 24751421 -3153632 + AT_rich Low_complexity Low_complexity 1 30 0 5 773 294 200 59 20 chr3R 24753499 24753601 -3151452 - ROO_I LTR Pao -7513 743 638 5 773 189 209 11 34 chr3R 24756346 24756435 -3148618 + (CAA)n Simple_repeat Simple_repeat 3 89 0 5 773 25 0 0 0 chr3R 24756666 24756691 -3148362 + AT_rich Low_complexity Low_complexity 1 25 0 5 773 203 266 16 0 chr3R 24757600 24757664 -3147389 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 773 216 0 0 0 chr3R 24758794 24758818 -3146235 + (A)n Simple_repeat Simple_repeat 1 24 0 5 773 231 36 0 0 chr3R 24760683 24760711 -3144342 + (ATATG)n Simple_repeat Simple_repeat 2 29 0 5 773 202 276 0 0 chr3R 24761012 24761070 -3143983 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 773 229 229 0 0 chr3R 24761160 24761208 -3143845 + A-rich Low_complexity Low_complexity 1 48 0 5 773 27 29 0 0 chr3R 24762415 24762449 -3142604 + AT_rich Low_complexity Low_complexity 1 34 0 5 773 180 77 0 0 chr3R 24762757 24762783 -3142270 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 773 212 158 0 0 chr3R 24766255 24766293 -3138760 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 773 215 276 0 0 chr3R 24766822 24766880 -3138173 + (CAGT)n Simple_repeat Simple_repeat 1 58 0 5 773 21 0 0 0 chr3R 24767246 24767267 -3137786 + AT_rich Low_complexity Low_complexity 1 21 0 5 773 243 0 0 0 chr3R 24768029 24768056 -3136997 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 773 288 137 0 0 chr3R 24768592 24768643 -3136410 + (CAGTT)n Simple_repeat Simple_repeat 1 51 0 5 773 198 0 0 0 chr3R 24768899 24768921 -3136132 + (T)n Simple_repeat Simple_repeat 1 22 0 5 773 251 261 0 0 chr3R 24769744 24769809 -3135244 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 773 246 62 0 0 chr3R 24770733 24770765 -3134288 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 773 237 65 0 0 chr3R 24771163 24771194 -3133859 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 773 219 250 0 0 chr3R 24771997 24772041 -3133012 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 773 230 189 0 19 chr3R 24772243 24772297 -3132756 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 774 29 78 0 0 chr3R 24772702 24772766 -3132287 + AT_rich Low_complexity Low_complexity 1 64 0 5 774 228 77 0 55 chr3R 24773938 24773993 -3131060 + (GTTTG)n Simple_repeat Simple_repeat 2 53 0 5 774 222 37 0 0 chr3R 24774096 24774123 -3130930 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 774 248 120 20 0 chr3R 24775189 24775239 -3129814 + (CAAAC)n Simple_repeat Simple_repeat 5 55 0 5 774 288 313 30 7 chr3R 24775610 24775745 -3129308 + (CAG)n Simple_repeat Simple_repeat 2 139 0 5 774 214 262 12 24 chr3R 24776828 24776910 -3128143 + G-rich Low_complexity Low_complexity 4 84 0 5 774 238 200 0 0 chr3R 24777724 24777779 -3127274 + A-rich Low_complexity Low_complexity 3 57 0 5 774 221 175 0 0 chr3R 24778191 24778231 -3126822 + (AAGTG)n Simple_repeat Simple_repeat 3 42 0 5 774 231 227 0 0 chr3R 24782606 24782672 -3122381 + (CCGAA)n Simple_repeat Simple_repeat 1 66 0 5 774 22 0 0 0 chr3R 24784949 24784971 -3120082 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 23 0 0 0 chr3R 24785912 24785935 -3119118 + AT_rich Low_complexity Low_complexity 1 23 0 5 774 207 0 0 0 chr3R 24787008 24787031 -3118022 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 774 372 111 0 0 chr3R 24787404 24787467 -3117586 + (ACTG)n Simple_repeat Simple_repeat 4 66 0 5 774 247 288 0 0 chr3R 24788871 24788944 -3116109 + (CCCCAA)n Simple_repeat Simple_repeat 3 75 0 5 774 213 39 0 0 chr3R 24791303 24791329 -3113724 + (CTTTG)n Simple_repeat Simple_repeat 3 28 0 5 774 207 0 0 0 chr3R 24793359 24793382 -3111671 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 774 303 85 0 0 chr3R 24796340 24796387 -3108666 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 774 180 77 0 0 chr3R 24798001 24798027 -3107026 + (CTG)n Simple_repeat Simple_repeat 3 28 0 5 774 240 35 0 0 chr3R 24800308 24800337 -3104716 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 774 324 0 0 0 chr3R 24803072 24803108 -3101945 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 774 225 94 0 0 chr3R 24803223 24803255 -3101798 + (CCGAA)n Simple_repeat Simple_repeat 3 34 0 5 774 227 192 0 19 chr3R 24804715 24804768 -3100285 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 774 24 0 0 0 chr3R 24805130 24805154 -3099899 + AT_rich Low_complexity Low_complexity 1 24 0 5 774 195 42 0 0 chr3R 24808912 24808936 -3096117 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5 774 212 294 0 0 chr3R 24809105 24809173 -3095880 + T-rich Low_complexity Low_complexity 2 69 0 5 774 21 0 0 0 chr3R 24809425 24809446 -3095607 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 23 0 0 0 chr3R 24810831 24810854 -3094199 + AT_rich Low_complexity Low_complexity 1 23 0 5 774 217 215 0 44 chr3R 24811879 24811947 -3093106 + (TTG)n Simple_repeat Simple_repeat 2 66 0 5 774 225 128 0 0 chr3R 24812039 24812086 -3092967 + (TCCC)n Simple_repeat Simple_repeat 4 50 0 5 774 225 139 0 0 chr3R 24812758 24812801 -3092252 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 774 23 0 0 0 chr3R 24813165 24813188 -3091865 + AT_rich Low_complexity Low_complexity 1 23 0 5 774 225 0 0 0 chr3R 24814381 24814406 -3090647 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 774 217 229 0 0 chr3R 24815084 24815132 -3089921 + (ATTCG)n Simple_repeat Simple_repeat 4 51 0 5 774 180 143 0 0 chr3R 24815300 24815342 -3089711 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 774 22 0 0 0 chr3R 24815393 24815415 -3089638 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 21 57 0 0 chr3R 24816230 24816265 -3088788 + AT_rich Low_complexity Low_complexity 1 35 0 5 774 204 277 15 0 chr3R 24816374 24816439 -3088614 + (CAG)n Simple_repeat Simple_repeat 3 68 0 5 774 302 197 40 0 chr3R 24817095 24817171 -3087882 + ROO_I LTR Pao 665 743 -7513 5 774 24 0 0 0 chr3R 24817953 24817977 -3087076 + AT_rich Low_complexity Low_complexity 1 24 0 5 774 21 0 0 0 chr3R 24820001 24820022 -3085031 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 270 125 0 0 chr3R 24821496 24821544 -3083509 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 774 22 0 0 0 chr3R 24823320 24823342 -3081711 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 25 31 0 0 chr3R 24824175 24824207 -3080846 + AT_rich Low_complexity Low_complexity 1 32 0 5 774 234 62 0 0 chr3R 24825647 24825679 -3079374 + (A)n Simple_repeat Simple_repeat 1 32 0 5 774 237 163 0 0 chr3R 24825766 24825815 -3079238 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 5 774 189 121 0 0 chr3R 24826605 24826638 -3078415 + (TTG)n Simple_repeat Simple_repeat 1 33 0 5 774 201 154 0 0 chr3R 24826663 24826702 -3078351 + (CAA)n Simple_repeat Simple_repeat 2 40 0 5 774 242 148 0 18 chr3R 24826845 24826900 -3078153 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 774 28 0 0 0 chr3R 24830236 24830264 -3074789 + AT_rich Low_complexity Low_complexity 1 28 0 5 774 21 0 0 0 chr3R 24830776 24830797 -3074256 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 269 247 0 22 chr3R 24832617 24832708 -3072345 + (TATATG)n Simple_repeat Simple_repeat 3 91 0 5 774 318 98 0 0 chr3R 24834317 24834368 -3070685 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 5 774 183 129 0 0 chr3R 24835065 24835096 -3069957 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 774 22 0 0 0 chr3R 24835675 24835697 -3069356 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 219 114 0 0 chr3R 24836132 24836167 -3068886 + (TTAG)n Simple_repeat Simple_repeat 4 38 0 5 774 180 111 0 0 chr3R 24836311 24836338 -3068715 + (CACCAT)n Simple_repeat Simple_repeat 1 27 0 5 774 216 0 0 0 chr3R 24839059 24839083 -3065970 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 5 774 270 0 0 0 chr3R 24840097 24840127 -3064926 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 774 201 39 0 0 chr3R 24842429 24842455 -3062598 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 774 210 154 26 0 chr3R 24843946 24843985 -3061068 + (CATCC)n Simple_repeat Simple_repeat 2 41 0 5 774 2798 97 39 0 chr3R 24851170 24851612 -3053441 + S_DM DNA Tc1 1 459 -1277 5 774 27 29 0 0 chr3R 24856662 24856696 -3048357 + AT_rich Low_complexity Low_complexity 1 34 0 5 774 189 180 0 0 chr3R 24863011 24863061 -3041992 + CT-rich Low_complexity Low_complexity 3 52 0 5 774 239 276 17 0 chr3R 24865097 24865155 -3039898 + (CGTG)n Simple_repeat Simple_repeat 4 62 0 5 774 213 132 0 0 chr3R 24868124 24868162 -3036891 + (ATTCG)n Simple_repeat Simple_repeat 2 39 0 5 774 213 178 0 0 chr3R 24872342 24872387 -3032666 + A-rich Low_complexity Low_complexity 1 45 0 5 774 266 47 0 44 chr3R 24872747 24872792 -3032261 + (CAAAAA)n Simple_repeat Simple_repeat 5 47 0 5 774 239 93 0 23 chr3R 24872989 24873033 -3032020 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 774 24 32 0 0 chr3R 24879990 24880021 -3025032 + AT_rich Low_complexity Low_complexity 1 31 0 5 774 21 0 0 0 chr3R 24880400 24880421 -3024632 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 35 41 0 0 chr3R 24881504 24881553 -3023500 + AT_rich Low_complexity Low_complexity 1 49 0 5 774 213 94 0 0 chr3R 24889778 24889810 -3015243 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 774 21 36 0 0 chr3R 24892720 24892748 -3012305 + AT_rich Low_complexity Low_complexity 1 28 0 5 774 270 95 0 0 chr3R 24895026 24895068 -3009985 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 774 203 234 0 0 chr3R 24895387 24895434 -3009619 + (TCG)n Simple_repeat Simple_repeat 2 48 0 5 774 200 200 15 0 chr3R 24895623 24895688 -3009365 + GA-rich Low_complexity Low_complexity 2 67 0 5 774 234 0 0 0 chr3R 24903303 24903329 -3001724 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 775 6239 16 115 1 chr3R 24905160 24905967 -2999086 + FB4_DM DNA Tc1 1 899 -3190 5 775 4311 18 0 0 chr3R 24905967 24906470 -2998583 - FB4_DM DNA Tc1 -3586 503 1 5 775 279 0 0 0 chr3R 24908586 24908617 -2996436 + (TTG)n Simple_repeat Simple_repeat 1 31 0 5 775 208 28 54 27 chr3R 24908726 24908763 -2996290 + (CAGC)n Simple_repeat Simple_repeat 1 38 0 5 775 206 95 24 0 chr3R 24915244 24915286 -2989767 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 775 212 175 0 0 chr3R 24917904 24917944 -2987109 + (ATG)n Simple_repeat Simple_repeat 1 40 0 5 775 227 114 23 0 chr3R 24920353 24920397 -2984656 + (TCCA)n Simple_repeat Simple_repeat 4 48 0 5 775 189 107 0 0 chr3R 24923709 24923737 -2981316 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 775 219 36 0 0 chr3R 24923921 24923949 -2981104 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 775 198 91 0 0 chr3R 24924093 24924126 -2980927 + (CAG)n Simple_repeat Simple_repeat 1 33 0 5 775 241 64 0 60 chr3R 24924195 24924245 -2980808 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 775 198 103 0 0 chr3R 24924420 24924449 -2980604 + (CAA)n Simple_repeat Simple_repeat 1 29 0 5 775 300 158 35 35 chr3R 24925244 24925329 -2979724 + ROO_I LTR Pao 643 727 -7529 5 775 183 167 0 0 chr3R 24928508 24928550 -2976503 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 775 206 200 0 0 chr3R 24928904 24928939 -2976114 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 775 280 242 16 24 chr3R 24929085 24929208 -2975845 + ROO_I LTR Pao 636 757 -7499 5 775 240 122 0 0 chr3R 24929378 24929419 -2975634 + (CAG)n Simple_repeat Simple_repeat 1 41 0 5 775 202 300 12 12 chr3R 24931397 24931478 -2973575 + (CAG)n Simple_repeat Simple_repeat 3 83 0 5 775 213 195 0 0 chr3R 24931779 24931820 -2973233 + (CAG)n Simple_repeat Simple_repeat 1 41 0 5 775 198 227 0 0 chr3R 24931848 24931923 -2973130 + (CAG)n Simple_repeat Simple_repeat 1 75 0 5 775 201 302 0 10 chr3R 24932225 24932322 -2972731 + (CAG)n Simple_repeat Simple_repeat 1 96 0 5 775 234 62 0 0 chr3R 24933306 24933338 -2971715 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 5 775 21 0 0 0 chr3R 24933504 24933525 -2971528 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 23 105 0 0 chr3R 24938581 24938667 -2966386 + AT_rich Low_complexity Low_complexity 1 86 0 5 775 23 0 0 0 chr3R 24944105 24944128 -2960925 + AT_rich Low_complexity Low_complexity 1 23 0 5 775 297 314 0 0 chr3R 24947047 24947149 -2957904 + (TCG)n Simple_repeat Simple_repeat 2 103 0 5 775 22 0 0 0 chr3R 24953634 24953656 -2951397 + AT_rich Low_complexity Low_complexity 1 22 0 5 775 203 183 16 62 chr3R 24953973 24954037 -2951016 + T-rich Low_complexity Low_complexity 6 66 0 5 775 21 0 0 0 chr3R 24958631 24958652 -2946401 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 312 91 0 0 chr3R 24958863 24958907 -2946146 + (CCAA)n Simple_repeat Simple_repeat 1 44 0 5 775 183 80 0 0 chr3R 24959419 24959444 -2945609 + (CAATC)n Simple_repeat Simple_repeat 2 26 0 5 775 231 36 0 0 chr3R 24960493 24960521 -2944532 + (CCTCG)n Simple_repeat Simple_repeat 2 29 0 5 775 318 67 0 0 chr3R 24965666 24965711 -2939342 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 5 775 21 0 0 0 chr3R 24975597 24975618 -2929435 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 250 227 0 26 chr3R 24982470 24982583 -2922470 + GA-rich Low_complexity Low_complexity 3 112 0 5 775 357 47 0 0 chr3R 24992768 24992811 -2912242 - ARS406_DM Unknown Unknown 0 353 311 5 775 205 186 0 0 chr3R 24998962 24999005 -2906048 + T-rich Low_complexity Low_complexity 1 43 0 5 775 261 109 0 0 chr3R 25000834 25000880 -2904173 + (TGG)n Simple_repeat Simple_repeat 3 48 0 5 775 202 195 0 0 chr3R 25000914 25000955 -2904098 + G-rich Low_complexity Low_complexity 1 41 0 5 775 255 229 14 0 chr3R 25001152 25001222 -2903831 + T-rich Low_complexity Low_complexity 2 72 0 5 775 234 191 0 0 chr3R 25002002 25002049 -2903004 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 5 775 209 217 0 0 chr3R 25004785 25004831 -2900222 + T-rich Low_complexity Low_complexity 1 46 0 5 775 315 85 0 0 chr3R 25007225 25007272 -2897781 + (CTG)n Simple_repeat Simple_repeat 1 47 0 5 775 207 184 0 0 chr3R 25009387 25009425 -2895628 + (GTGTG)n Simple_repeat Simple_repeat 4 41 0 5 775 207 152 0 0 chr3R 25010320 25010366 -2894687 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 775 254 312 29 17 chr3R 25010677 25010738 -2894315 + XDMR_DM Unknown Unknown 181 354 -5 5 775 337 174 60 40 chr3R 25010738 25010849 -2894204 - SAR_DM Satellite Satellite -1027 445 346 5 775 249 108 143 39 chr3R 25011072 25011149 -2893904 - SAR_DM Satellite Satellite -1053 419 335 5 775 349 100 34 101 chr3R 25011369 25011458 -2893595 - SAR_DM Satellite Satellite -1056 416 334 5 775 242 298 46 31 chr3R 25011553 25011747 -2893306 + XDMR Unknown Unknown 165 361 0 5 775 349 100 34 101 chr3R 25011678 25011767 -2893286 - SAR_DM Satellite Satellite -1056 416 334 5 775 242 298 46 31 chr3R 25011862 25012056 -2892997 + XDMR Unknown Unknown 165 361 0 5 775 349 100 34 101 chr3R 25011987 25012076 -2892977 - SAR_DM Satellite Satellite -1056 416 334 5 775 359 190 73 117 chr3R 25012296 25012475 -2892578 - SAR_DM Satellite Satellite -693 779 618 5 775 192 40 0 0 chr3R 25017324 25017349 -2887704 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 775 238 211 0 0 chr3R 25019135 25019187 -2885866 + (GTTTG)n Simple_repeat Simple_repeat 4 55 0 5 775 180 158 0 0 chr3R 25020299 25020337 -2884716 + T-rich Low_complexity Low_complexity 1 38 0 5 775 257 220 0 0 chr3R 25020515 25020574 -2884479 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 775 32 43 0 0 chr3R 25021098 25021144 -2883909 + AT_rich Low_complexity Low_complexity 1 46 0 5 775 32 95 0 0 chr3R 25021211 25021306 -2883747 + AT_rich Low_complexity Low_complexity 1 95 0 5 775 21 0 0 0 chr3R 25021895 25021916 -2883137 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 201 147 0 0 chr3R 25025849 25025883 -2879170 + (TATG)n Simple_repeat Simple_repeat 3 36 0 5 775 37 0 0 0 chr3R 25029600 25029637 -2875416 + AT_rich Low_complexity Low_complexity 1 37 0 5 775 189 0 0 0 chr3R 25030975 25030996 -2874057 + (TTG)n Simple_repeat Simple_repeat 2 22 0 5 775 242 216 0 0 chr3R 25031753 25031804 -2873249 + (CAT)n Simple_repeat Simple_repeat 1 51 0 5 775 231 227 15 15 chr3R 25032609 25032676 -2872377 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 775 216 111 0 0 chr3R 25032988 25033024 -2872029 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 775 28 0 0 0 chr3R 25033139 25033167 -2871886 + AT_rich Low_complexity Low_complexity 1 28 0 5 776 204 258 30 0 chr3R 25035295 25035361 -2869692 + (CAAAG)n Simple_repeat Simple_repeat 4 71 0 5 776 192 77 0 0 chr3R 25035797 25035823 -2869230 + (GCTTG)n Simple_repeat Simple_repeat 3 28 0 5 776 192 179 0 0 chr3R 25035984 25036023 -2869030 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 776 213 65 0 0 chr3R 25036551 25036582 -2868471 + (T)n Simple_repeat Simple_repeat 1 31 0 5 776 202 195 0 0 chr3R 25037246 25037287 -2867766 + CT-rich Low_complexity Low_complexity 1 41 0 5 776 25 0 0 0 chr3R 25039892 25039917 -2865136 + AT_rich Low_complexity Low_complexity 1 25 0 5 776 263 146 0 18 chr3R 25044533 25044589 -2860464 + (CAG)n Simple_repeat Simple_repeat 2 56 0 5 776 235 310 0 0 chr3R 25044880 25044938 -2860115 + (CTGGGG)n Simple_repeat Simple_repeat 1 58 0 5 776 23 54 0 0 chr3R 25045363 25045400 -2859653 + AT_rich Low_complexity Low_complexity 1 37 0 5 776 22 0 0 0 chr3R 25047795 25047817 -2857236 + AT_rich Low_complexity Low_complexity 1 22 0 5 776 24 32 0 0 chr3R 25052748 25052779 -2852274 + AT_rich Low_complexity Low_complexity 1 31 0 5 776 23 68 0 0 chr3R 25054624 25054668 -2850385 + AT_rich Low_complexity Low_complexity 1 44 0 5 776 198 191 0 0 chr3R 25055117 25055164 -2849889 + (CGTG)n Simple_repeat Simple_repeat 1 47 0 5 776 24 53 0 0 chr3R 25060620 25060658 -2844395 + AT_rich Low_complexity Low_complexity 1 38 0 5 776 27 0 0 0 chr3R 25066311 25066338 -2838715 + AT_rich Low_complexity Low_complexity 1 27 0 5 776 22 35 0 0 chr3R 25068827 25068856 -2836197 + AT_rich Low_complexity Low_complexity 1 29 0 5 776 28 48 0 0 chr3R 25069611 25069653 -2835400 + AT_rich Low_complexity Low_complexity 1 42 0 5 776 21 36 0 0 chr3R 25069893 25069921 -2835132 + AT_rich Low_complexity Low_complexity 1 28 0 5 776 29 0 0 0 chr3R 25070466 25070495 -2834558 + AT_rich Low_complexity Low_complexity 1 29 0 5 776 22 0 0 0 chr3R 25076913 25076935 -2828118 + AT_rich Low_complexity Low_complexity 1 22 0 5 776 180 77 0 0 chr3R 25079810 25079836 -2825217 + (TGG)n Simple_repeat Simple_repeat 1 26 0 5 776 188 149 21 0 chr3R 25081181 25081228 -2823825 + CT-rich Low_complexity Low_complexity 1 48 0 5 776 32 0 0 0 chr3R 25083420 25083452 -2821601 + AT_rich Low_complexity Low_complexity 1 32 0 5 776 228 86 0 0 chr3R 25089423 25089458 -2815595 + (GGATG)n Simple_repeat Simple_repeat 1 35 0 5 776 249 257 0 0 chr3R 25090698 25090807 -2814246 + (TGG)n Simple_repeat Simple_repeat 3 111 0 5 776 24 0 0 0 chr3R 25092356 25092380 -2812673 + AT_rich Low_complexity Low_complexity 1 24 0 5 776 26 50 0 0 chr3R 25098273 25098313 -2806740 + AT_rich Low_complexity Low_complexity 1 40 0 5 776 308 24 24 0 chr3R 25099355 25099396 -2805657 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 776 237 108 0 0 chr3R 25103294 25103331 -2801722 + (GGCTG)n Simple_repeat Simple_repeat 1 37 0 5 776 187 93 23 23 chr3R 25105361 25105405 -2799648 + (TATAA)n Simple_repeat Simple_repeat 5 48 0 5 776 26 30 0 0 chr3R 25105531 25105564 -2799489 + AT_rich Low_complexity Low_complexity 1 33 0 5 776 297 0 0 0 chr3R 25108582 25108615 -2796438 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 776 226 288 0 12 chr3R 25109990 25110071 -2794982 + (CGAAT)n Simple_repeat Simple_repeat 2 81 0 5 776 221 269 0 15 chr3R 25113146 25113214 -2791839 + GA-rich Low_complexity Low_complexity 1 67 0 5 776 21 0 0 0 chr3R 25129499 25129520 -2775533 + AT_rich Low_complexity Low_complexity 1 21 0 5 776 201 203 27 55 chr3R 25135325 25135398 -2769655 + (CCA)n Simple_repeat Simple_repeat 2 72 0 5 776 222 128 0 0 chr3R 25136872 25136911 -2768142 + (CAATC)n Simple_repeat Simple_repeat 3 41 0 5 776 25 0 0 0 chr3R 25140076 25140101 -2764952 + AT_rich Low_complexity Low_complexity 1 25 0 5 776 207 0 0 0 chr3R 25140758 25140781 -2764272 + (GTCTG)n Simple_repeat Simple_repeat 3 25 0 5 776 21 71 0 0 chr3R 25145543 25145585 -2759468 + AT_rich Low_complexity Low_complexity 1 42 0 5 776 2146 0 0 4 chr3R 25145606 25145854 -2759199 + LINEJ1_DM LINE Jockey 4761 5007 -13 5 776 509 304 25 9 chr3R 25146120 25146442 -2758611 + SAR_DM Satellite Satellite 572 898 -574 5 776 23 0 0 0 chr3R 25148923 25148946 -2756107 + GC_rich Low_complexity Low_complexity 1 23 0 5 776 42 82 0 0 chr3R 25151263 25151361 -2753692 + AT_rich Low_complexity Low_complexity 1 98 0 5 776 23 0 0 0 chr3R 25151753 25151776 -2753277 + AT_rich Low_complexity Low_complexity 1 23 0 5 776 471 63 0 0 chr3R 25151947 25152010 -2753043 + (ACTG)n Simple_repeat Simple_repeat 2 64 0 5 776 183 80 0 0 chr3R 25153082 25153107 -2751946 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 5 776 191 36 36 0 chr3R 25154160 25154188 -2750865 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 776 207 232 35 18 chr3R 25154314 25154371 -2750682 + (TCCG)n Simple_repeat Simple_repeat 4 61 0 5 776 243 0 0 0 chr3R 25155497 25155524 -2749529 + (GGA)n Simple_repeat Simple_repeat 3 29 0 5 776 381 22 0 0 chr3R 25159982 25160028 -2745025 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 776 258 143 0 0 chr3R 25160687 25160736 -2744317 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 776 22 0 0 0 chr3R 25161742 25161764 -2743289 + GC_rich Low_complexity Low_complexity 1 22 0 5 776 25 0 0 0 chr3R 25164439 25164464 -2740589 + AT_rich Low_complexity Low_complexity 1 25 0 5 776 192 241 0 0 chr3R 25164646 25164704 -2740349 + (ATGGTG)n Simple_repeat Simple_repeat 3 60 0 5 776 231 36 0 0 chr3R 25164749 25164777 -2740276 + (TTG)n Simple_repeat Simple_repeat 3 30 0 5 776 237 146 0 0 chr3R 25165207 25165255 -2739798 + (TTG)n Simple_repeat Simple_repeat 1 48 0 5 777 207 0 0 0 chr3R 25166355 25166378 -2738675 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 777 219 170 0 0 chr3R 25166960 25167007 -2738046 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 5 777 195 69 0 0 chr3R 25168173 25168202 -2736851 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 777 207 0 0 0 chr3R 25172396 25172419 -2732634 + (A)n Simple_repeat Simple_repeat 1 23 0 5 777 180 200 0 0 chr3R 25173060 25173110 -2731943 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 777 267 213 0 0 chr3R 25173229 25173304 -2731749 + (TTG)n Simple_repeat Simple_repeat 1 75 0 5 777 192 152 0 0 chr3R 25173930 25173963 -2731090 + T-rich Low_complexity Low_complexity 1 33 0 5 777 203 157 20 0 chr3R 25175084 25175135 -2729918 + (CGAAA)n Simple_repeat Simple_repeat 3 54 0 5 777 23 0 0 0 chr3R 25176298 25176321 -2728732 + AT_rich Low_complexity Low_complexity 1 23 0 5 777 186 43 0 0 chr3R 25176463 25176486 -2728567 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 777 219 36 0 0 chr3R 25177002 25177030 -2728023 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 777 225 119 0 0 chr3R 25177079 25177121 -2727932 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 777 214 194 38 67 chr3R 25177192 25177297 -2727756 + A-rich Low_complexity Low_complexity 2 103 0 5 777 185 0 40 0 chr3R 25178187 25178212 -2726841 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 777 207 25 24 48 chr3R 25178994 25179036 -2726017 + (TTATA)n Simple_repeat Simple_repeat 4 44 0 5 777 279 0 0 0 chr3R 25179196 25179227 -2725826 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 777 22 0 0 0 chr3R 25180687 25180709 -2724344 + AT_rich Low_complexity Low_complexity 1 22 0 5 777 24 0 0 0 chr3R 25180852 25180876 -2724177 + AT_rich Low_complexity Low_complexity 1 24 0 5 777 203 133 0 0 chr3R 25187078 25187108 -2717945 + (CGGAA)n Simple_repeat Simple_repeat 1 30 0 5 777 192 77 0 0 chr3R 25187275 25187301 -2717752 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 5 777 218 123 13 64 chr3R 25188094 25188172 -2716881 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 777 257 51 26 0 chr3R 25188298 25188337 -2716716 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 777 225 0 0 0 chr3R 25189491 25189516 -2715537 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 777 26 0 0 0 chr3R 25190162 25190188 -2714865 + AT_rich Low_complexity Low_complexity 1 26 0 5 777 261 109 0 0 chr3R 25192116 25192162 -2712891 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 777 225 65 0 0 chr3R 25196210 25196241 -2708812 + (TTG)n Simple_repeat Simple_repeat 3 33 0 5 777 207 189 0 0 chr3R 25196288 25196325 -2708728 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 777 323 127 16 0 chr3R 25196919 25196982 -2708071 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 777 34 42 0 0 chr3R 25202663 25202711 -2702342 + AT_rich Low_complexity Low_complexity 1 48 0 5 777 25 31 0 0 chr3R 25202789 25202821 -2702232 + AT_rich Low_complexity Low_complexity 1 32 0 5 777 27 49 0 0 chr3R 25205889 25205930 -2699123 + AT_rich Low_complexity Low_complexity 1 41 0 5 777 186 150 0 0 chr3R 25207874 25207914 -2697139 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 777 254 229 0 0 chr3R 25210804 25210865 -2694188 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 777 21 36 0 0 chr3R 25212497 25212525 -2692528 + AT_rich Low_complexity Low_complexity 1 28 0 5 777 189 0 0 0 chr3R 25214332 25214353 -2690700 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 777 26 50 0 0 chr3R 25214727 25214767 -2690286 + AT_rich Low_complexity Low_complexity 1 40 0 5 777 214 204 23 0 chr3R 25218431 25218475 -2686578 + (CATA)n Simple_repeat Simple_repeat 3 47 0 5 777 294 87 0 0 chr3R 25218654 25218700 -2686353 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 777 210 233 0 0 chr3R 25220153 25220196 -2684857 + GA-rich Low_complexity Low_complexity 3 45 0 5 777 206 121 0 0 chr3R 25222009 25222042 -2683011 + (GAATG)n Simple_repeat Simple_repeat 3 35 0 5 777 23 0 0 0 chr3R 25223264 25223287 -2681766 + AT_rich Low_complexity Low_complexity 1 23 0 5 777 180 0 0 0 chr3R 25226762 25226782 -2678271 + (CAGG)n Simple_repeat Simple_repeat 3 22 0 5 777 225 0 0 0 chr3R 25227050 25227075 -2677978 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 777 252 86 0 0 chr3R 25227466 25227501 -2677552 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 777 37 0 0 0 chr3R 25227903 25227940 -2677113 + AT_rich Low_complexity Low_complexity 1 37 0 5 777 180 163 0 0 chr3R 25229551 25229594 -2675459 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 777 255 118 0 56 chr3R 25232099 25232153 -2672900 - ROO_I LTR Pao -7511 745 695 5 777 11115 5 0 1 chr3R 25232395 25233593 -2671460 + LINEJ1_DM LINE Jockey 3819 5015 -5 5 777 195 129 0 0 chr3R 25234057 25234088 -2670965 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 777 230 197 15 15 chr3R 25235930 25235997 -2669056 + (TTG)n Simple_repeat Simple_repeat 2 68 0 5 777 207 255 0 0 chr3R 25236286 25236337 -2668716 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 777 207 273 15 0 chr3R 25236471 25236537 -2668516 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 777 22 0 0 0 chr3R 25237158 25237180 -2667873 + AT_rich Low_complexity Low_complexity 1 22 0 5 777 208 250 12 12 chr3R 25237427 25237512 -2667541 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 777 257 118 20 0 chr3R 25238868 25238919 -2666134 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 777 21 0 0 0 chr3R 25240728 25240749 -2664304 + AT_rich Low_complexity Low_complexity 1 21 0 5 777 183 129 0 0 chr3R 25246723 25246754 -2658299 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 777 198 118 0 0 chr3R 25247436 25247470 -2657583 + (CGAGT)n Simple_repeat Simple_repeat 2 35 0 5 777 25 31 0 0 chr3R 25250092 25250124 -2654929 + AT_rich Low_complexity Low_complexity 1 32 0 5 777 21 36 0 0 chr3R 25250883 25250911 -2654142 + AT_rich Low_complexity Low_complexity 1 28 0 5 777 34 0 0 0 chr3R 25251529 25251563 -2653490 + AT_rich Low_complexity Low_complexity 1 34 0 5 777 186 103 0 0 chr3R 25251787 25251816 -2653237 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 777 21 36 0 0 chr3R 25251991 25252019 -2653034 + AT_rich Low_complexity Low_complexity 1 28 0 5 777 24 0 0 0 chr3R 25254919 25254943 -2650110 + AT_rich Low_complexity Low_complexity 1 24 0 5 777 255 61 0 0 chr3R 25255779 25255812 -2649241 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 777 216 0 0 0 chr3R 25256520 25256544 -2648509 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 777 195 129 0 0 chr3R 25259569 25259600 -2645453 + (TTTCG)n Simple_repeat Simple_repeat 4 34 0 5 777 186 43 0 0 chr3R 25263196 25263219 -2641834 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 777 21 0 0 0 chr3R 25265841 25265862 -2639191 + AT_rich Low_complexity Low_complexity 1 21 0 5 777 25 0 0 0 chr3R 25266616 25266641 -2638412 + AT_rich Low_complexity Low_complexity 1 25 0 5 777 278 47 0 44 chr3R 25267112 25267157 -2637896 + (CAAAC)n Simple_repeat Simple_repeat 5 47 0 5 777 206 269 0 0 chr3R 25268863 25268915 -2636138 + (CGA)n Simple_repeat Simple_repeat 2 53 0 5 777 21 0 0 0 chr3R 25269850 25269871 -2635182 + AT_rich Low_complexity Low_complexity 1 21 0 5 777 207 0 0 0 chr3R 25271106 25271129 -2633924 + (T)n Simple_repeat Simple_repeat 1 23 0 5 777 213 94 0 0 chr3R 25271981 25272013 -2633040 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 777 209 344 0 0 chr3R 25272917 25272978 -2632075 + G-rich Low_complexity Low_complexity 5 65 0 5 777 24 0 0 0 chr3R 25273314 25273338 -2631715 + AT_rich Low_complexity Low_complexity 1 24 0 5 777 192 40 0 0 chr3R 25276499 25276524 -2628529 + (CAT)n Simple_repeat Simple_repeat 3 27 0 5 777 306 0 0 0 chr3R 25281226 25281260 -2623793 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 777 211 179 18 18 chr3R 25282192 25282249 -2622804 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 777 234 0 0 0 chr3R 25282378 25282404 -2622649 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 777 205 295 0 25 chr3R 25283782 25283862 -2621191 + (CTG)n Simple_repeat Simple_repeat 3 80 0 5 777 209 246 0 17 chr3R 25283803 25283861 -2621192 + (TTG)n Simple_repeat Simple_repeat 1 57 0 5 777 198 0 0 0 chr3R 25283938 25283960 -2621093 + (TC)n Simple_repeat Simple_repeat 2 23 0 5 777 206 62 31 0 chr3R 25287129 25287161 -2617892 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 777 21 57 0 0 chr3R 25289187 25289222 -2615831 + AT_rich Low_complexity Low_complexity 1 35 0 5 777 198 0 0 0 chr3R 25291327 25291349 -2613704 + (A)n Simple_repeat Simple_repeat 1 22 0 5 777 222 105 0 0 chr3R 25294083 25294121 -2610932 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 777 201 39 0 0 chr3R 25294379 25294405 -2610648 + (T)n Simple_repeat Simple_repeat 1 26 0 5 777 225 0 0 0 chr3R 25295500 25295525 -2609528 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 777 254 106 21 0 chr3R 25296324 25296371 -2608682 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 777 269 246 0 0 chr3R 25296479 25296540 -2608513 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 777 253 93 37 0 chr3R 25296694 25296748 -2608305 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 97 21 0 0 0 chr3R 25296887 25296908 -2608145 + AT_rich Low_complexity Low_complexity 1 21 0 5 778 33 56 0 0 chr3R 25297140 25297194 -2607859 + AT_rich Low_complexity Low_complexity 1 54 0 5 778 29 0 0 0 chr3R 25299789 25299818 -2605235 + AT_rich Low_complexity Low_complexity 1 29 0 5 778 180 0 0 0 chr3R 25301286 25301306 -2603747 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 778 463 104 18 28 chr3R 25309490 25309599 -2595454 + (CAG)n Simple_repeat Simple_repeat 3 110 0 5 778 27 62 0 0 chr3R 25310236 25310284 -2594769 + AT_rich Low_complexity Low_complexity 1 48 0 5 778 261 140 0 0 chr3R 25312418 25312475 -2592578 + (TAAAAA)n Simple_repeat Simple_repeat 2 58 0 5 778 25 0 0 0 chr3R 25316995 25317020 -2588033 + AT_rich Low_complexity Low_complexity 1 25 0 5 778 192 111 0 0 chr3R 25321286 25321322 -2583731 + (TAGA)n Simple_repeat Simple_repeat 1 36 0 5 778 23 33 0 0 chr3R 25324719 25324749 -2580304 + AT_rich Low_complexity Low_complexity 1 30 0 5 778 207 167 0 0 chr3R 25329043 25329079 -2575974 + (CGTG)n Simple_repeat Simple_repeat 3 38 0 5 778 353 22 22 0 chr3R 25332981 25333027 -2572026 + (TTTTA)n Simple_repeat Simple_repeat 3 49 0 5 778 273 250 0 0 chr3R 25333518 25333586 -2571467 + (CATCG)n Simple_repeat Simple_repeat 1 68 0 5 778 261 226 0 0 chr3R 25334438 25334500 -2570553 + (ACTG)n Simple_repeat Simple_repeat 3 64 0 5 778 267 250 0 26 chr3R 25335185 25335263 -2569790 + (CTG)n Simple_repeat Simple_repeat 2 77 0 5 778 345 187 9 142 chr3R 25336824 25336930 -2568123 - DMRP1 Unknown Unknown -1 345 254 5 778 741 67 0 0 chr3R 25336938 25337028 -2568025 - DMRP1 Unknown Unknown -227 119 30 5 778 210 71 0 0 chr3R 25340476 25340504 -2564549 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 5 778 234 62 0 0 chr3R 25343807 25343839 -2561214 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 5 778 217 245 0 0 chr3R 25344688 25344737 -2560316 + (CAT)n Simple_repeat Simple_repeat 1 49 0 5 778 24 0 0 0 chr3R 25345195 25345219 -2559834 + AT_rich Low_complexity Low_complexity 1 24 0 5 778 28 29 0 0 chr3R 25345259 25345294 -2559759 + AT_rich Low_complexity Low_complexity 1 35 0 5 778 186 118 0 0 chr3R 25347730 25347764 -2557289 + (A)n Simple_repeat Simple_repeat 1 34 0 5 778 25 0 0 0 chr3R 25347888 25347913 -2557140 + AT_rich Low_complexity Low_complexity 1 25 0 5 778 182 122 0 68 chr3R 25351364 25351408 -2553645 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 778 29 47 0 0 chr3R 25354365 25354408 -2550645 + AT_rich Low_complexity Low_complexity 1 43 0 5 778 337 165 63 105 chr3R 25354976 25355071 -2549982 - DMRP1 Unknown Unknown -19 327 237 5 778 873 114 14 21 chr3R 25355082 25355225 -2549828 - DMRP1 Unknown Unknown -196 150 9 5 778 213 229 0 0 chr3R 25355751 25355799 -2549254 + (CATTT)n Simple_repeat Simple_repeat 3 50 0 5 778 342 67 0 0 chr3R 25356862 25356907 -2548146 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 5 778 249 214 0 0 chr3R 25359829 25359885 -2545168 + A-rich Low_complexity Low_complexity 1 56 0 5 778 22 70 0 0 chr3R 25365308 25365351 -2539702 + AT_rich Low_complexity Low_complexity 1 43 0 5 778 30 0 0 0 chr3R 25375075 25375105 -2529948 + AT_rich Low_complexity Low_complexity 1 30 0 5 778 230 0 33 0 chr3R 25375873 25375903 -2529150 + (TTTAA)n Simple_repeat Simple_repeat 2 32 0 5 778 203 293 0 0 chr3R 25377912 25377970 -2527083 + (TCG)n Simple_repeat Simple_repeat 2 59 0 5 778 35 0 0 0 chr3R 25379998 25380033 -2525020 + AT_rich Low_complexity Low_complexity 1 35 0 5 778 260 250 12 0 chr3R 25382453 25382537 -2522516 + ROO_I LTR Pao 632 716 -7540 5 778 333 117 0 0 chr3R 25382621 25382681 -2522372 + (CAG)n Simple_repeat Simple_repeat 1 60 0 5 778 211 54 0 51 chr3R 25384350 25384389 -2520664 + (ATG)n Simple_repeat Simple_repeat 2 38 0 5 778 237 108 0 0 chr3R 25385317 25385354 -2519699 + (CATTT)n Simple_repeat Simple_repeat 4 40 0 5 778 208 0 62 0 chr3R 25386525 25386557 -2518496 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 778 256 188 49 12 chr3R 25386627 25386708 -2518345 - ROO_I LTR Pao -7530 726 643 5 778 185 159 0 22 chr3R 25387637 25387682 -2517371 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 778 24 0 0 0 chr3R 25388332 25388356 -2516697 + AT_rich Low_complexity Low_complexity 1 24 0 5 778 219 69 0 0 chr3R 25389438 25389467 -2515586 + (GGA)n Simple_repeat Simple_repeat 1 29 0 5 778 25 31 0 0 chr3R 25390976 25391008 -2514045 + AT_rich Low_complexity Low_complexity 1 32 0 5 778 27 0 0 0 chr3R 25391328 25391355 -2513698 + AT_rich Low_complexity Low_complexity 1 27 0 5 778 26 30 0 0 chr3R 25391926 25391959 -2513094 + AT_rich Low_complexity Low_complexity 1 33 0 5 778 186 118 0 0 chr3R 25393154 25393188 -2511865 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 5 778 239 122 0 20 chr3R 25395922 25395972 -2509081 + (TTG)n Simple_repeat Simple_repeat 1 49 0 5 778 23 78 0 0 chr3R 25396107 25396158 -2508895 + AT_rich Low_complexity Low_complexity 1 51 0 5 778 204 40 0 0 chr3R 25397456 25397481 -2507572 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 778 186 167 0 0 chr3R 25397715 25397751 -2507302 + GA-rich Low_complexity Low_complexity 2 37 0 5 778 195 42 0 0 chr3R 25400402 25400426 -2504627 + (CAATC)n Simple_repeat Simple_repeat 3 26 0 5 778 240 35 0 0 chr3R 25400788 25400817 -2504236 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 778 21 0 0 0 chr3R 25401294 25401315 -2503738 + AT_rich Low_complexity Low_complexity 1 21 0 5 778 270 0 0 0 chr3R 25402519 25402549 -2502504 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 5 778 186 118 0 0 chr3R 25402751 25402785 -2502268 + (TTGG)n Simple_repeat Simple_repeat 4 37 0 5 778 216 0 0 0 chr3R 25409361 25409385 -2495668 + (T)n Simple_repeat Simple_repeat 1 24 0 5 778 249 83 0 0 chr3R 25411870 25411906 -2493147 + (CAGTT)n Simple_repeat Simple_repeat 5 40 0 5 778 330 169 0 0 chr3R 25414382 25414441 -2490612 + DNAREP1_DM LINE Penelope 536 594 0 5 778 38 0 0 0 chr3R 25414504 25414542 -2490511 + AT_rich Low_complexity Low_complexity 1 38 0 5 778 22 0 0 0 chr3R 25414726 25414748 -2490305 + AT_rich Low_complexity Low_complexity 1 22 0 5 778 294 73 0 0 chr3R 25414813 25414854 -2490199 + (TTG)n Simple_repeat Simple_repeat 3 43 0 5 778 248 0 31 0 chr3R 25423549 25423581 -2481472 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 5 779 204 246 15 15 chr3R 25431058 25431124 -2473929 + (TTTG)n Simple_repeat Simple_repeat 4 69 0 5 779 219 36 0 0 chr3R 25432180 25432208 -2472845 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 779 198 103 0 0 chr3R 25433190 25433219 -2471834 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 779 22 0 0 0 chr3R 25433248 25433270 -2471783 + AT_rich Low_complexity Low_complexity 1 22 0 5 779 24 32 0 0 chr3R 25444517 25444548 -2460505 + AT_rich Low_complexity Low_complexity 1 31 0 5 779 26 50 0 0 chr3R 25448590 25448630 -2456423 + AT_rich Low_complexity Low_complexity 1 40 0 5 779 234 178 0 76 chr3R 25448933 25449012 -2456041 + (GTTTG)n Simple_repeat Simple_repeat 1 73 0 5 779 195 100 0 0 chr3R 25449081 25449111 -2455942 + (GAGTG)n Simple_repeat Simple_repeat 3 32 0 5 779 210 71 0 0 chr3R 25457116 25457144 -2447909 + (CGGAA)n Simple_repeat Simple_repeat 5 32 0 5 779 209 222 0 0 chr3R 25458980 25459025 -2446028 + T-rich Low_complexity Low_complexity 1 45 0 5 779 182 174 0 21 chr3R 25459094 25459141 -2445912 + (CAA)n Simple_repeat Simple_repeat 2 47 0 5 779 204 97 0 0 chr3R 25459186 25459217 -2445836 + (CAA)n Simple_repeat Simple_repeat 3 33 0 5 779 210 162 0 0 chr3R 25459483 25459520 -2445533 + T-rich Low_complexity Low_complexity 1 37 0 5 779 185 163 0 20 chr3R 25461237 25461287 -2443766 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 779 219 88 0 0 chr3R 25464102 25464136 -2440917 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 779 22 35 0 0 chr3R 25466261 25466290 -2438763 + AT_rich Low_complexity Low_complexity 1 29 0 5 779 180 143 0 0 chr3R 25466742 25466784 -2438269 + (TCC)n Simple_repeat Simple_repeat 1 42 0 5 779 879 244 54 20 chr3R 25470025 25470340 -2434713 + SAR_DM Satellite Satellite 1 325 -948 5 779 627 235 90 17 chr3R 25470146 25470380 -2434673 - XDMR_DM Unknown Unknown -4 356 106 5 779 207 69 0 0 chr3R 25472292 25472321 -2432732 + (CAGT)n Simple_repeat Simple_repeat 4 32 0 5 779 206 288 0 17 chr3R 25473197 25473257 -2431796 + (CGA)n Simple_repeat Simple_repeat 2 60 0 5 779 202 224 0 20 chr3R 25476211 25476261 -2428792 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 779 221 286 12 0 chr3R 25478610 25478694 -2426359 + (CA)n Simple_repeat Simple_repeat 1 85 0 5 779 2087 4 0 47 chr3R 25478835 25479109 -2425944 - LINEJ1_DM LINE Jockey 0 5020 4760 5 779 19322 7 1 0 chr3R 25479112 25481192 -2423861 - LINEJ1_DM LINE Jockey -2930 2090 10 5 779 22 35 0 0 chr3R 25485145 25485174 -2419879 + AT_rich Low_complexity Low_complexity 1 29 0 5 779 189 0 0 0 chr3R 25485923 25485944 -2419109 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 779 400 274 19 13 chr3R 25489357 25489516 -2415537 - XDMR Unknown Unknown -5 356 197 5 779 24 53 0 0 chr3R 25499415 25499453 -2405600 + AT_rich Low_complexity Low_complexity 1 38 0 5 779 213 39 0 0 chr3R 25516771 25516797 -2388256 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 779 198 71 0 0 chr3R 25517633 25517661 -2387392 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 779 267 31 0 0 chr3R 25517878 25517910 -2387143 + (CCA)n Simple_repeat Simple_repeat 1 32 0 5 779 220 191 0 0 chr3R 25519384 25519431 -2385622 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 779 468 126 0 0 chr3R 25521657 25521744 -2383309 + (CAG)n Simple_repeat Simple_repeat 1 87 0 5 779 213 258 0 0 chr3R 25524205 25524267 -2380786 + (CAG)n Simple_repeat Simple_repeat 2 63 0 5 779 189 0 0 0 chr3R 25526090 25526111 -2378942 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 779 21 0 0 0 chr3R 25526681 25526702 -2378351 + AT_rich Low_complexity Low_complexity 1 21 0 5 779 21 36 0 0 chr3R 25526975 25527003 -2378050 + AT_rich Low_complexity Low_complexity 1 28 0 5 779 180 111 0 0 chr3R 25529674 25529701 -2375352 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 779 25 31 0 0 chr3R 25531752 25531784 -2373269 + AT_rich Low_complexity Low_complexity 1 32 0 5 779 200 114 29 0 chr3R 25532432 25532467 -2372586 + (CTCA)n Simple_repeat Simple_repeat 2 37 0 5 779 228 67 0 0 chr3R 25533067 25533097 -2371956 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 779 26 0 0 0 chr3R 25533587 25533613 -2371440 + AT_rich Low_complexity Low_complexity 1 26 0 5 779 198 0 0 0 chr3R 25535164 25535186 -2369867 + (CCTG)n Simple_repeat Simple_repeat 3 24 0 5 779 22 0 0 0 chr3R 25537483 25537505 -2367548 + AT_rich Low_complexity Low_complexity 1 22 0 5 779 365 303 47 44 chr3R 25541407 25541728 -2363325 + SAR_DM Satellite Satellite 556 877 -595 5 779 204 97 0 0 chr3R 25544319 25544350 -2360703 + (CCA)n Simple_repeat Simple_repeat 2 32 0 5 779 207 69 0 0 chr3R 25545937 25545966 -2359087 + (CAGT)n Simple_repeat Simple_repeat 1 29 0 5 779 189 74 0 0 chr3R 25551796 25551823 -2353230 + (A)n Simple_repeat Simple_repeat 1 27 0 5 779 265 294 33 0 chr3R 25554095 25554187 -2350866 + ROO_I LTR Pao 641 735 -7521 5 780 24 0 0 0 chr3R 25563822 25563846 -2341207 + AT_rich Low_complexity Low_complexity 1 24 0 5 780 4644 2 2 10 chr3R 25564044 25564554 -2340499 - HOBO DNA hAT 0 3016 2511 5 780 8481 1 0 0 chr3R 25564546 25565450 -2339603 - HOBO DNA hAT -2112 904 1 5 780 34 0 0 0 chr3R 25574641 25574675 -2330378 + AT_rich Low_complexity Low_complexity 1 34 0 5 780 255 152 0 0 chr3R 25575352 25575398 -2329655 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 5 780 198 103 0 0 chr3R 25575437 25575466 -2329587 + (TTG)n Simple_repeat Simple_repeat 3 31 0 5 780 223 237 0 0 chr3R 25578140 25578199 -2326854 + (CAG)n Simple_repeat Simple_repeat 1 59 0 5 780 181 176 14 29 chr3R 25579775 25579845 -2325208 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 5 780 22 88 0 0 chr3R 25582777 25582834 -2322219 + AT_rich Low_complexity Low_complexity 1 57 0 5 780 23 33 0 0 chr3R 25583684 25583714 -2321339 + AT_rich Low_complexity Low_complexity 1 30 0 5 780 213 94 0 0 chr3R 25585922 25585954 -2319099 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 780 21 0 0 0 chr3R 25585999 25586020 -2319033 + AT_rich Low_complexity Low_complexity 1 21 0 5 780 4952 2 2 2 chr3R 25586136 25586683 -2318370 + POGO DNA Pogo 1 547 -1574 5 780 5343 2 3 3 chr3R 25586674 25587282 -2317771 + POGO DNA Pogo 1514 2121 0 5 780 25 0 0 0 chr3R 25588200 25588225 -2316828 + AT_rich Low_complexity Low_complexity 1 25 0 5 780 209 269 0 25 chr3R 25589814 25589894 -2315159 + CT-rich Low_complexity Low_complexity 4 81 0 5 780 227 228 0 17 chr3R 25589921 25589979 -2315074 + (CAA)n Simple_repeat Simple_repeat 2 58 0 5 780 216 67 0 0 chr3R 25590176 25590206 -2314847 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 780 399 130 0 0 chr3R 25592753 25592830 -2312223 + (CAG)n Simple_repeat Simple_repeat 3 79 0 5 780 189 74 0 0 chr3R 25593011 25593038 -2312015 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 780 180 0 0 0 chr3R 25593147 25593167 -2311886 + (CAG)n Simple_repeat Simple_repeat 1 20 0 5 780 322 212 11 34 chr3R 25593186 25593274 -2311779 + ROO_I LTR Pao 658 743 -7513 5 780 21 0 0 0 chr3R 25594019 25594040 -2311013 + AT_rich Low_complexity Low_complexity 1 21 0 5 780 237 173 0 19 chr3R 25598750 25598803 -2306250 + CT-rich Low_complexity Low_complexity 1 52 0 5 780 218 204 0 0 chr3R 25599220 25599269 -2305784 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 780 222 62 0 0 chr3R 25600321 25600353 -2304700 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 780 22 0 0 0 chr3R 25600940 25600962 -2304091 + AT_rich Low_complexity Low_complexity 1 22 0 5 780 23 0 0 0 chr3R 25601892 25601915 -2303138 + AT_rich Low_complexity Low_complexity 1 23 0 5 780 24 32 0 0 chr3R 25602461 25602492 -2302561 + AT_rich Low_complexity Low_complexity 1 31 0 5 780 204 40 0 0 chr3R 25604624 25604649 -2300404 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 780 24 53 0 0 chr3R 25604854 25604892 -2300161 + AT_rich Low_complexity Low_complexity 1 38 0 5 780 204 135 0 0 chr3R 25607699 25607736 -2297317 + (GAATG)n Simple_repeat Simple_repeat 4 40 0 5 780 225 0 0 0 chr3R 25610057 25610082 -2294971 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 780 192 77 0 0 chr3R 25611412 25611438 -2293615 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 780 201 152 0 0 chr3R 25612079 25612112 -2292941 + A-rich Low_complexity Low_complexity 2 34 0 5 780 225 0 0 0 chr3R 25614049 25614074 -2290979 + (AACTG)n Simple_repeat Simple_repeat 4 28 0 5 780 272 120 0 20 chr3R 25614543 25614594 -2290459 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 780 240 86 0 0 chr3R 25614960 25614995 -2290058 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 780 368 204 0 53 chr3R 25615946 25616060 -2288993 + ROO_I LTR Pao 644 751 -7505 5 780 186 43 0 0 chr3R 25616243 25616266 -2288787 + (CAG)n Simple_repeat Simple_repeat 1 23 0 5 780 218 311 0 0 chr3R 25618011 25618072 -2286981 + (CAG)n Simple_repeat Simple_repeat 2 62 0 5 780 209 227 0 0 chr3R 25618391 25618435 -2286618 + (CAA)n Simple_repeat Simple_repeat 1 44 0 5 780 27 29 0 0 chr3R 25625258 25625292 -2279761 + AT_rich Low_complexity Low_complexity 1 34 0 5 780 195 42 0 0 chr3R 25647747 25647771 -2257282 + (GAGTG)n Simple_repeat Simple_repeat 2 25 0 5 780 189 107 0 0 chr3R 25651732 25651760 -2253293 + (GTCTG)n Simple_repeat Simple_repeat 5 32 0 5 780 213 65 0 0 chr3R 25661008 25661039 -2244014 + (TAAAG)n Simple_repeat Simple_repeat 3 33 0 5 780 186 167 0 0 chr3R 25663990 25664026 -2241027 + (CAGC)n Simple_repeat Simple_repeat 1 36 0 5 780 192 111 0 0 chr3R 25666780 25666816 -2238237 + (CATTG)n Simple_repeat Simple_repeat 4 39 0 5 780 243 0 0 0 chr3R 25667190 25667217 -2237836 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 780 23 33 0 0 chr3R 25668607 25668637 -2236416 + AT_rich Low_complexity Low_complexity 1 30 0 5 780 218 0 95 0 chr3R 25669633 25669675 -2235378 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 780 214 184 0 20 chr3R 25669806 25669856 -2235197 + CT-rich Low_complexity Low_complexity 1 49 0 5 780 23 0 0 0 chr3R 25685857 25685880 -2219173 + AT_rich Low_complexity Low_complexity 1 23 0 5 781 22 35 0 0 chr3R 25694878 25694907 -2210146 + AT_rich Low_complexity Low_complexity 1 29 0 5 781 229 182 0 0 chr3R 25697207 25697251 -2207802 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 781 222 158 0 66 chr3R 25704076 25704137 -2200916 + (CCA)n Simple_repeat Simple_repeat 3 59 0 5 781 195 100 0 0 chr3R 25706211 25706241 -2198812 + (CAG)n Simple_repeat Simple_repeat 1 30 0 5 781 22 0 0 0 chr3R 25706646 25706668 -2198385 + AT_rich Low_complexity Low_complexity 1 22 0 5 781 3990 2 0 0 chr3R 25707796 25708224 -2196829 + ROO_LTR LTR Pao 1 428 0 5 781 74526 1 3 1 chr3R 25708224 25716467 -2188586 + ROO_I LTR Pao 1 8256 0 5 781 3990 2 0 0 chr3R 25716467 25716895 -2188158 + ROO_LTR LTR Pao 1 428 0 5 781 202 280 13 0 chr3R 25722810 25722885 -2182168 + (ATG)n Simple_repeat Simple_repeat 2 77 0 5 781 201 270 0 0 chr3R 25725529 25725618 -2179435 + (CAAG)n Simple_repeat Simple_repeat 1 89 0 5 781 33 25 0 0 chr3R 25727362 25727402 -2177651 + AT_rich Low_complexity Low_complexity 1 40 0 5 781 234 238 0 0 chr3R 25727996 25728059 -2176994 + GA-rich Low_complexity Low_complexity 3 65 0 5 781 24 0 0 0 chr3R 25729621 25729645 -2175408 + AT_rich Low_complexity Low_complexity 1 24 0 5 781 21 57 0 0 chr3R 25729754 25729789 -2175264 + AT_rich Low_complexity Low_complexity 1 35 0 5 781 25 65 0 0 chr3R 25729992 25730038 -2175015 + AT_rich Low_complexity Low_complexity 1 46 0 5 781 222 254 0 0 chr3R 25735829 25735888 -2169165 + (CCCCAG)n Simple_repeat Simple_repeat 4 62 0 5 781 189 0 0 0 chr3R 25736631 25736652 -2168401 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 781 24 32 0 0 chr3R 25739660 25739691 -2165362 + AT_rich Low_complexity Low_complexity 1 31 0 5 781 186 50 0 70 chr3R 25749033 25749076 -2155977 + (TTA)n Simple_repeat Simple_repeat 3 42 0 5 781 21 36 0 0 chr3R 25749170 25749198 -2155855 + AT_rich Low_complexity Low_complexity 1 28 0 5 781 22 70 0 0 chr3R 25752134 25752177 -2152876 + AT_rich Low_complexity Low_complexity 1 43 0 5 781 22 0 0 0 chr3R 25768740 25768762 -2136291 + AT_rich Low_complexity Low_complexity 1 22 0 5 781 233 220 0 0 chr3R 25783810 25783860 -2121193 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 5 781 219 122 40 20 chr3R 25785447 25785497 -2119556 + (CACTC)n Simple_repeat Simple_repeat 5 55 0 5 781 26 30 0 0 chr3R 25787237 25787270 -2117783 + AT_rich Low_complexity Low_complexity 1 33 0 5 781 192 40 0 0 chr3R 25787605 25787630 -2117423 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 781 213 39 0 0 chr3R 25794098 25794124 -2110929 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 5 781 532 244 12 56 chr3R 25795942 25796159 -2108894 + SAR_DM Satellite Satellite 1 207 -1031 5 781 549 226 37 66 chr3R 25798388 25798630 -2106423 + SAR_DM Satellite Satellite 601 835 -637 5 781 249 83 0 0 chr3R 25801616 25801652 -2103401 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 781 192 40 0 0 chr3R 25809872 25809897 -2095156 + (CATCC)n Simple_repeat Simple_repeat 3 27 0 5 781 209 205 0 0 chr3R 25809947 25809986 -2095067 + (CGAAT)n Simple_repeat Simple_repeat 4 42 0 5 781 230 116 0 23 chr3R 25816074 25816118 -2088935 + (CAG)n Simple_repeat Simple_repeat 1 43 0 5 781 23 0 0 0 chr3R 25821041 25821064 -2083989 + AT_rich Low_complexity Low_complexity 1 23 0 5 782 228 67 0 0 chr3R 25829675 25829705 -2075348 + (TGGA)n Simple_repeat Simple_repeat 3 32 0 5 782 22 0 0 0 chr3R 25830514 25830536 -2074517 + AT_rich Low_complexity Low_complexity 1 22 0 5 782 35 0 0 0 chr3R 25831594 25831629 -2073424 + AT_rich Low_complexity Low_complexity 1 35 0 5 782 202 257 0 0 chr3R 25835556 25835630 -2069423 + GA-rich Low_complexity Low_complexity 3 76 0 5 782 30 77 0 0 chr3R 25838175 25838240 -2066813 + AT_rich Low_complexity Low_complexity 1 65 0 5 782 180 0 0 0 chr3R 25849068 25849088 -2055965 + (ATAGG)n Simple_repeat Simple_repeat 3 22 0 5 782 194 136 23 0 chr3R 25850863 25850907 -2054146 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 782 247 158 0 0 chr3R 25855289 25855327 -2049726 + (CCCGAA)n Simple_repeat Simple_repeat 2 39 0 5 782 183 129 0 0 chr3R 25859658 25859689 -2045364 + (CAG)n Simple_repeat Simple_repeat 1 31 0 5 782 26 74 0 0 chr3R 25868756 25868810 -2036243 + AT_rich Low_complexity Low_complexity 1 54 0 5 782 180 0 0 0 chr3R 25869665 25869685 -2035368 + (CGA)n Simple_repeat Simple_repeat 2 21 0 5 782 306 98 0 0 chr3R 25875428 25875479 -2029574 + (CATCC)n Simple_repeat Simple_repeat 4 54 0 5 782 222 37 0 0 chr3R 25877780 25877807 -2027246 + (ATTCG)n Simple_repeat Simple_repeat 1 27 0 5 782 207 139 0 0 chr3R 25884252 25884288 -2020765 + (CAA)n Simple_repeat Simple_repeat 3 38 0 5 782 201 159 0 0 chr3R 25884719 25884763 -2020290 + CT-rich Low_complexity Low_complexity 1 44 0 5 782 21 0 0 0 chr3R 25885995 25886016 -2019037 + AT_rich Low_complexity Low_complexity 1 21 0 5 782 237 65 0 0 chr3R 25886707 25886738 -2018315 + (TTG)n Simple_repeat Simple_repeat 2 32 0 5 782 252 226 32 16 chr3R 25890555 25890618 -2014435 + TART LINE telomeric 12639 12702 -1775 5 782 207 0 0 0 chr3R 25896386 25896409 -2008644 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 782 22 70 0 0 chr3R 25901330 25901373 -2003680 + AT_rich Low_complexity Low_complexity 1 43 0 5 782 306 150 16 32 chr3R 25902003 25902065 -2002988 - DNAREP1_DM LINE Penelope -533 61 1 5 782 210 192 0 0 chr3R 25902270 25902322 -2002731 + CT-rich Low_complexity Low_complexity 4 55 0 5 782 201 210 0 0 chr3R 25906064 25906126 -1998927 + (CTG)n Simple_repeat Simple_repeat 2 63 0 5 782 21 0 0 0 chr3R 25908651 25908672 -1996381 + AT_rich Low_complexity Low_complexity 1 21 0 5 782 8493 1 0 0 chr3R 25910629 25911533 -1993520 + HOBO DNA hAT 1 904 -2112 5 782 4650 2 2 10 chr3R 25911525 25912035 -1993018 + HOBO DNA hAT 2511 3016 0 5 782 222 37 0 0 chr3R 25915120 25915147 -1989906 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 782 42 0 0 0 chr3R 25915461 25915503 -1989550 + AT_rich Low_complexity Low_complexity 1 42 0 5 782 300 53 0 0 chr3R 25919588 25919626 -1985427 + (CAT)n Simple_repeat Simple_repeat 3 40 0 5 782 189 196 0 0 chr3R 25924016 25924067 -1980986 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 782 216 0 0 0 chr3R 25925335 25925359 -1979694 + (A)n Simple_repeat Simple_repeat 1 24 0 5 782 198 71 0 0 chr3R 25931587 25931615 -1973438 + (T)n Simple_repeat Simple_repeat 1 28 0 5 782 336 121 0 81 chr3R 25935322 25935421 -1969632 + ROO_I LTR Pao 639 729 -7527 5 782 255 242 20 50 chr3R 25935772 25935872 -1969181 + ROO_I LTR Pao 647 743 -7513 5 782 186 143 0 0 chr3R 25936076 25936111 -1968942 + (CAG)n Simple_repeat Simple_repeat 2 36 0 5 782 383 174 33 0 chr3R 25936137 25936229 -1968824 + ROO_I LTR Pao 640 734 -7522 5 782 303 71 0 0 chr3R 25937516 25937558 -1967495 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 782 348 94 0 0 chr3R 25937614 25937667 -1967386 + (CAG)n Simple_repeat Simple_repeat 3 55 0 5 782 200 233 0 0 chr3R 25938557 25938600 -1966453 + (CAATC)n Simple_repeat Simple_repeat 5 47 0 5 782 201 74 0 0 chr3R 25939295 25939322 -1965731 + (A)n Simple_repeat Simple_repeat 1 27 0 5 782 220 188 36 36 chr3R 25941986 25942069 -1962984 + (CTAAA)n Simple_repeat Simple_repeat 3 85 0 5 782 251 122 20 0 chr3R 25942860 25942909 -1962144 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 782 25 51 0 0 chr3R 25942983 25943022 -1962031 + AT_rich Low_complexity Low_complexity 1 39 0 5 782 21 36 0 0 chr3R 25947082 25947110 -1957943 + AT_rich Low_complexity Low_complexity 1 28 0 5 782 23 33 0 0 chr3R 25947201 25947231 -1957822 + AT_rich Low_complexity Low_complexity 1 30 0 5 782 21 0 0 0 chr3R 25948117 25948138 -1956915 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 21 0 0 0 chr3R 25974081 25974102 -1930951 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 209 260 13 27 chr3R 25974559 25974634 -1930419 + (TGGA)n Simple_repeat Simple_repeat 2 75 0 5 783 28 0 0 0 chr3R 25975195 25975223 -1929830 + AT_rich Low_complexity Low_complexity 1 28 0 5 783 725 286 26 24 chr3R 25976588 25977007 -1928046 - SAR_DM Satellite Satellite -525 947 528 5 783 25 51 0 0 chr3R 25985317 25985356 -1919697 + AT_rich Low_complexity Low_complexity 1 39 0 5 783 183 100 0 0 chr3R 25989312 25989342 -1915711 + (GTTTG)n Simple_repeat Simple_repeat 5 34 0 5 783 246 128 0 0 chr3R 26000133 26000172 -1904881 + (TTCGG)n Simple_repeat Simple_repeat 4 42 0 5 783 21 71 0 0 chr3R 26005824 26005866 -1899187 + AT_rich Low_complexity Low_complexity 1 42 0 5 783 250 278 0 0 chr3R 26018279 26018333 -1886720 + (CCCGAA)n Simple_repeat Simple_repeat 5 58 0 5 783 203 147 0 0 chr3R 26024327 26024361 -1880692 + (TCC)n Simple_repeat Simple_repeat 1 34 0 5 783 23 0 0 0 chr3R 26027331 26027354 -1877699 + AT_rich Low_complexity Low_complexity 1 23 0 5 783 26 0 0 0 chr3R 26034983 26035009 -1870044 + AT_rich Low_complexity Low_complexity 1 26 0 5 783 24 0 0 0 chr3R 26036930 26036954 -1868099 + AT_rich Low_complexity Low_complexity 1 24 0 5 783 35 41 0 0 chr3R 26037488 26037537 -1867516 + AT_rich Low_complexity Low_complexity 1 49 0 5 783 23 54 0 0 chr3R 26038223 26038260 -1866793 + AT_rich Low_complexity Low_complexity 1 37 0 5 783 22 56 0 0 chr3R 26038903 26038939 -1866114 + AT_rich Low_complexity Low_complexity 1 36 0 5 783 201 108 0 0 chr3R 26039869 26039906 -1865147 + (TTTTTA)n Simple_repeat Simple_repeat 1 37 0 5 783 22 56 0 0 chr3R 26041163 26041199 -1863854 + AT_rich Low_complexity Low_complexity 1 36 0 5 783 24 0 0 0 chr3R 26047958 26047982 -1857071 + AT_rich Low_complexity Low_complexity 1 24 0 5 783 29 28 0 0 chr3R 26048215 26048251 -1856802 + AT_rich Low_complexity Low_complexity 1 36 0 5 783 21 0 0 0 chr3R 26053185 26053206 -1851847 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 21 0 0 0 chr3R 26053364 26053385 -1851668 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 22 0 0 0 chr3R 26054188 26054210 -1850843 + AT_rich Low_complexity Low_complexity 1 22 0 5 783 261 0 0 0 chr3R 26055194 26055223 -1849830 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 783 9513 19 4 3 chr3R 26064540 26065644 -1839409 + PROTOP_A DNA P 1 1105 0 5 783 23 0 0 0 chr3R 26068327 26068350 -1836703 + AT_rich Low_complexity Low_complexity 1 23 0 5 783 26 0 0 0 chr3R 26072004 26072030 -1833023 + AT_rich Low_complexity Low_complexity 1 26 0 5 783 22 35 0 0 chr3R 26072351 26072380 -1832673 + AT_rich Low_complexity Low_complexity 1 29 0 5 783 226 367 0 0 chr3R 26078181 26078361 -1826692 + (CTG)n Simple_repeat Simple_repeat 1 180 0 5 783 21 57 0 0 chr3R 26079451 26079486 -1825567 + AT_rich Low_complexity Low_complexity 1 35 0 5 783 243 88 0 0 chr3R 26080906 26080940 -1824113 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 783 22 0 0 0 chr3R 26081377 26081399 -1823654 + AT_rich Low_complexity Low_complexity 1 22 0 5 783 227 238 0 130 chr3R 26082503 26082595 -1822458 + Stalker2_LTR LTR Gypsy 209 288 -136 5 783 25 65 0 0 chr3R 26083116 26083162 -1821891 + AT_rich Low_complexity Low_complexity 1 46 0 5 784 21 0 0 0 chr3R 26083464 26083485 -1821568 + AT_rich Low_complexity Low_complexity 1 21 0 5 784 23 0 0 0 chr3R 26086540 26086563 -1818490 + AT_rich Low_complexity Low_complexity 1 23 0 5 784 23 0 0 0 chr3R 26088296 26088319 -1816734 + AT_rich Low_complexity Low_complexity 1 23 0 5 784 215 118 0 89 chr3R 26090682 26090738 -1814315 + (CAGAGA)n Simple_repeat Simple_repeat 5 55 0 5 784 23 33 0 0 chr3R 26092202 26092232 -1812821 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 21 57 0 0 chr3R 26096446 26096481 -1808572 + AT_rich Low_complexity Low_complexity 1 35 0 5 784 180 0 0 0 chr3R 26098982 26099002 -1806051 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 784 229 208 0 0 chr3R 26101799 26101847 -1803206 + (CATA)n Simple_repeat Simple_repeat 2 49 0 5 784 31 44 0 0 chr3R 26103042 26103087 -1801966 + AT_rich Low_complexity Low_complexity 1 45 0 5 784 225 191 0 45 chr3R 26104680 26104768 -1800285 + ROO_I LTR Pao 651 734 -7522 5 784 195 42 0 0 chr3R 26105691 26105715 -1799338 + (CAG)n Simple_repeat Simple_repeat 1 24 0 5 784 309 89 0 0 chr3R 26105805 26105850 -1799203 + (CAG)n Simple_repeat Simple_repeat 1 45 0 5 784 22 0 0 0 chr3R 26107446 26107468 -1797585 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 212 143 0 0 chr3R 26107814 26107849 -1797204 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 784 180 0 0 0 chr3R 26110674 26110694 -1794359 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 784 208 277 0 0 chr3R 26111872 26111919 -1793134 + C-rich Low_complexity Low_complexity 1 47 0 5 784 182 118 29 0 chr3R 26112561 26112595 -1792458 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 5 784 25 0 0 0 chr3R 26112909 26112934 -1792119 + AT_rich Low_complexity Low_complexity 1 25 0 5 784 22 0 0 0 chr3R 26119240 26119262 -1785791 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 37 52 0 0 chr3R 26119322 26119380 -1785673 + AT_rich Low_complexity Low_complexity 1 58 0 5 784 207 100 0 0 chr3R 26120027 26120057 -1784996 + (TATATG)n Simple_repeat Simple_repeat 1 30 0 5 784 52 41 0 0 chr3R 26120847 26120920 -1784133 + AT_rich Low_complexity Low_complexity 1 73 0 5 784 22 0 0 0 chr3R 26121097 26121119 -1783934 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 24 0 0 0 chr3R 26121905 26121929 -1783124 + AT_rich Low_complexity Low_complexity 1 24 0 5 784 222 136 23 0 chr3R 26121984 26122028 -1783025 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 784 25 65 0 0 chr3R 26123441 26123487 -1781566 + AT_rich Low_complexity Low_complexity 1 46 0 5 784 30 0 0 0 chr3R 26129491 26129521 -1775532 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 24 0 0 0 chr3R 26133996 26134020 -1771033 + AT_rich Low_complexity Low_complexity 1 24 0 5 784 180 135 0 0 chr3R 26134031 26134068 -1770985 + (A)n Simple_repeat Simple_repeat 1 37 0 5 784 242 311 23 8 chr3R 26134164 26134297 -1770756 + T-rich Low_complexity Low_complexity 3 137 0 5 784 29 28 0 0 chr3R 26134376 26134412 -1770641 + AT_rich Low_complexity Low_complexity 1 36 0 5 784 222 37 0 0 chr3R 26134447 26134474 -1770579 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 5 784 189 0 0 0 chr3R 26138592 26138613 -1766440 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 784 276 120 0 0 chr3R 26140225 26140275 -1764778 + (A)n Simple_repeat Simple_repeat 1 50 0 5 784 32 0 0 0 chr3R 26140389 26140421 -1764632 + AT_rich Low_complexity Low_complexity 1 32 0 5 784 212 229 16 32 chr3R 26141186 26141249 -1763804 + (CACTT)n Simple_repeat Simple_repeat 4 65 0 5 784 546 43 0 0 chr3R 26141366 26141435 -1763618 + (CAT)n Simple_repeat Simple_repeat 2 70 0 5 784 3712 2 0 2 chr3R 26143102 26143531 -1761522 + ROO_LTR LTR Pao 1 428 0 5 784 49506 5 5 2 chr3R 26143531 26149437 -1755616 + ROO_I LTR Pao 1 5920 -2336 5 784 6390 4 16 0 chr3R 26149434 26150207 -1754846 + ROO_I LTR Pao 7472 8256 0 5 784 3712 2 0 2 chr3R 26150207 26150636 -1754417 + ROO_LTR LTR Pao 1 428 0 5 784 192 40 0 0 chr3R 26150964 26150989 -1754064 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 784 30 0 0 0 chr3R 26152564 26152594 -1752459 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 303 93 0 0 chr3R 26153500 26153543 -1751510 + (TGAA)n Simple_repeat Simple_repeat 4 46 0 5 784 21 36 0 0 chr3R 26158134 26158162 -1746891 + AT_rich Low_complexity Low_complexity 1 28 0 5 784 291 28 0 0 chr3R 26160674 26160710 -1744343 + (A)n Simple_repeat Simple_repeat 1 36 0 5 784 21 0 0 0 chr3R 26161064 26161085 -1743968 + AT_rich Low_complexity Low_complexity 1 21 0 5 784 23 33 0 0 chr3R 26163001 26163031 -1742022 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 200 182 0 0 chr3R 26163819 26163852 -1741201 + (CAG)n Simple_repeat Simple_repeat 1 33 0 5 784 22 0 0 0 chr3R 26165323 26165345 -1739708 + GC_rich Low_complexity Low_complexity 1 22 0 5 784 250 213 0 0 chr3R 26165370 26165417 -1739636 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 784 228 140 51 34 chr3R 26165497 26165556 -1739497 + (TCTG)n Simple_repeat Simple_repeat 3 62 0 5 784 207 0 0 0 chr3R 26165556 26165579 -1739474 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 784 22 0 0 0 chr3R 26166789 26166811 -1738242 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 26 0 0 0 chr3R 26169753 26169779 -1735274 + AT_rich Low_complexity Low_complexity 1 26 0 5 784 22 0 0 0 chr3R 26170379 26170401 -1734652 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 180 0 0 0 chr3R 26171451 26171471 -1733582 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 784 471 18 0 0 chr3R 26172778 26172834 -1732219 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 784 203 250 0 0 chr3R 26173054 26173102 -1731951 + (CAGTC)n Simple_repeat Simple_repeat 4 51 0 5 784 230 0 0 32 chr3R 26173459 26173490 -1731563 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 784 210 317 9 9 chr3R 26177534 26177639 -1727414 + (TCTG)n Simple_repeat Simple_repeat 4 108 0 5 784 243 0 0 0 chr3R 26177758 26177785 -1727268 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 784 21 0 0 0 chr3R 26178765 26178786 -1726267 + AT_rich Low_complexity Low_complexity 1 21 0 5 784 189 74 0 0 chr3R 26180235 26180262 -1724791 + (T)n Simple_repeat Simple_repeat 1 27 0 5 784 204 40 0 0 chr3R 26180418 26180443 -1724610 + (GAGTG)n Simple_repeat Simple_repeat 1 25 0 5 784 201 156 0 0 chr3R 26183513 26183545 -1721508 + (ACTG)n Simple_repeat Simple_repeat 2 33 0 5 784 186 43 0 0 chr3R 26183601 26183624 -1721429 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 784 273 57 0 0 chr3R 26184763 26184798 -1720255 + (CTG)n Simple_repeat Simple_repeat 3 37 0 5 784 183 139 0 0 chr3R 26186475 26186511 -1718542 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 784 331 184 0 28 chr3R 26186511 26186617 -1718436 + ROO_I LTR Pao 641 743 -7513 5 784 282 183 0 0 chr3R 26186709 26186780 -1718273 + (CAG)n Simple_repeat Simple_repeat 1 71 0 5 784 231 114 0 0 chr3R 26186829 26186864 -1718189 + (CAG)n Simple_repeat Simple_repeat 2 36 0 5 784 255 301 0 0 chr3R 26187891 26187974 -1717079 + A-rich Low_complexity Low_complexity 2 84 0 5 784 22 35 0 0 chr3R 26189011 26189040 -1716013 + AT_rich Low_complexity Low_complexity 1 29 0 5 784 218 125 21 0 chr3R 26194359 26194407 -1710646 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 784 213 139 0 0 chr3R 26195072 26195115 -1709938 + (A)n Simple_repeat Simple_repeat 1 43 0 5 784 200 131 0 21 chr3R 26195768 26195815 -1709238 + (CTAAA)n Simple_repeat Simple_repeat 4 49 0 5 784 273 186 0 0 chr3R 26196230 26196300 -1708753 + (CA)n Simple_repeat Simple_repeat 2 71 0 5 784 222 261 0 0 chr3R 26197667 26197732 -1707321 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 784 24 0 0 0 chr3R 26197897 26197921 -1707132 + AT_rich Low_complexity Low_complexity 1 24 0 5 784 26 0 0 0 chr3R 26199737 26199763 -1705290 + AT_rich Low_complexity Low_complexity 1 26 0 5 784 26 0 0 0 chr3R 26201288 26201314 -1703739 + AT_rich Low_complexity Low_complexity 1 26 0 5 784 61886 2 1 14 chr3R 26201315 26208883 -1696170 + DM412 LTR Gypsy 1 6897 0 5 784 243 79 0 0 chr3R 26209189 26209227 -1695826 + (TTCGG)n Simple_repeat Simple_repeat 1 38 0 5 784 518 276 54 47 chr3R 26210902 26211179 -1693874 - SAR_DM Satellite Satellite -588 884 606 5 784 21 0 0 0 chr3R 26212417 26212438 -1692615 + AT_rich Low_complexity Low_complexity 1 21 0 5 785 207 88 0 0 chr3R 26218319 26218353 -1686700 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 785 4017 0 0 0 chr3R 26221994 26222422 -1682631 + ROO_LTR LTR Pao 1 428 0 5 785 62007 1 1 0 chr3R 26222422 26229262 -1675791 + ROO_I LTR Pao 1 6850 -1406 5 785 4408 0 2 0 chr3R 26229262 26229774 -1675279 + ROO_I LTR Pao 7744 8256 0 5 785 4017 0 0 0 chr3R 26229774 26230202 -1674851 + ROO_LTR LTR Pao 1 428 0 5 785 23 0 0 0 chr3R 26243140 26243163 -1661890 + AT_rich Low_complexity Low_complexity 1 23 0 5 785 578 226 23 23 chr3R 26248463 26248635 -1656418 - Baggins1 LINE LOA -5235 218 47 5 785 210 71 0 0 chr3R 26260869 26260897 -1644156 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 785 34 72 0 0 chr3R 26281905 26281974 -1623079 + AT_rich Low_complexity Low_complexity 1 69 0 5 785 210 91 0 0 chr3R 26282399 26282432 -1622621 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 785 234 91 0 0 chr3R 26287708 26287741 -1617312 + (TTA)n Simple_repeat Simple_repeat 2 34 0 5 785 231 169 0 38 chr3R 26302748 26302828 -1602225 + ROO_I LTR Pao 639 715 -7541 5 785 3143 0 0 3 chr3R 26306264 26306616 -1598437 - LINEJ1_DM LINE Jockey 0 5020 4670 5 785 18903 9 1 0 chr3R 26306616 26308661 -1596392 - LINEJ1_DM LINE Jockey -2969 2051 6 5 785 33 43 0 0 chr3R 26317679 26317726 -1587327 + AT_rich Low_complexity Low_complexity 1 47 0 5 785 204 40 0 0 chr3R 26322746 26322771 -1582282 + (TTAG)n Simple_repeat Simple_repeat 3 27 0 5 785 180 0 0 0 chr3R 26326727 26326747 -1578306 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 5 785 27 29 0 0 chr3R 26333660 26333694 -1571359 + AT_rich Low_complexity Low_complexity 1 34 0 5 785 212 250 0 0 chr3R 26343257 26343321 -1561732 + T-rich Low_complexity Low_complexity 1 64 0 5 786 211 277 12 12 chr3R 26348003 26348087 -1556966 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 786 180 200 0 0 chr3R 26357027 26357072 -1547981 + A-rich Low_complexity Low_complexity 2 46 0 5 786 21 0 0 0 chr3R 26359489 26359510 -1545543 + AT_rich Low_complexity Low_complexity 1 21 0 5 786 239 152 43 0 chr3R 26359576 26359622 -1545431 + Gypsy_I LTR Gypsy 184 231 -6276 5 786 183 42 0 0 chr3R 26360294 26360318 -1544735 + (A)n Simple_repeat Simple_repeat 1 24 0 5 786 30 69 0 0 chr3R 26366865 26366923 -1538130 + AT_rich Low_complexity Low_complexity 1 58 0 5 786 606 270 47 34 chr3R 26369393 26369773 -1535280 - SAR_DM Satellite Satellite -860 612 228 5 786 333 289 34 27 chr3R 26369645 26369791 -1535262 + XDMR Unknown Unknown 1 147 -214 5 786 180 0 0 0 chr3R 26369995 26370015 -1535038 + (CCCCCT)n Simple_repeat Simple_repeat 6 25 0 5 786 24 32 0 0 chr3R 26370752 26370783 -1534270 + AT_rich Low_complexity Low_complexity 1 31 0 5 786 32 0 0 0 chr3R 26374095 26374127 -1530926 + AT_rich Low_complexity Low_complexity 1 32 0 5 786 27 49 0 0 chr3R 26377178 26377219 -1527834 + AT_rich Low_complexity Low_complexity 1 41 0 5 786 24 32 0 0 chr3R 26379024 26379055 -1525998 + AT_rich Low_complexity Low_complexity 1 31 0 5 786 24 0 0 0 chr3R 26383929 26383953 -1521100 + AT_rich Low_complexity Low_complexity 1 24 0 5 786 198 0 0 0 chr3R 26385074 26385096 -1519957 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 786 208 147 0 0 chr3R 26385314 26385348 -1519705 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 5 786 29 0 0 0 chr3R 26387993 26388022 -1517031 + AT_rich Low_complexity Low_complexity 1 29 0 5 786 24 0 0 0 chr3R 26389761 26389785 -1515268 + AT_rich Low_complexity Low_complexity 1 24 0 5 786 24 32 0 0 chr3R 26390701 26390732 -1514321 + AT_rich Low_complexity Low_complexity 1 31 0 5 786 396 118 0 0 chr3R 26396650 26396718 -1508335 + (ACTG)n Simple_repeat Simple_repeat 4 71 0 5 786 23 33 0 0 chr3R 26399649 26399679 -1505374 + AT_rich Low_complexity Low_complexity 1 30 0 5 786 23 0 0 0 chr3R 26401329 26401352 -1503701 + AT_rich Low_complexity Low_complexity 1 23 0 5 786 24 53 0 0 chr3R 26401977 26402015 -1503038 + AT_rich Low_complexity Low_complexity 1 38 0 5 786 218 226 0 16 chr3R 26403102 26403165 -1501888 + (CAA)n Simple_repeat Simple_repeat 1 62 0 5 786 198 0 0 0 chr3R 26404234 26404256 -1500797 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 5 786 301 193 35 24 chr3R 26404333 26404418 -1500635 + (CATA)n Simple_repeat Simple_repeat 3 88 0 5 786 33 80 0 0 chr3R 26404565 26404640 -1500413 + AT_rich Low_complexity Low_complexity 1 75 0 5 786 22 0 0 0 chr3R 26405799 26405821 -1499232 + AT_rich Low_complexity Low_complexity 1 22 0 5 786 24 0 0 0 chr3R 26415931 26415955 -1489098 + AT_rich Low_complexity Low_complexity 1 24 0 5 786 21 0 0 0 chr3R 26433741 26433762 -1471291 + AT_rich Low_complexity Low_complexity 1 21 0 5 786 23 0 0 0 chr3R 26441432 26441455 -1463598 + AT_rich Low_complexity Low_complexity 1 23 0 5 786 235 49 0 47 chr3R 26443165 26443208 -1461845 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 786 21 36 0 0 chr3R 26447329 26447357 -1457696 + AT_rich Low_complexity Low_complexity 1 28 0 5 786 192 40 0 0 chr3R 26448271 26448296 -1456757 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 786 23 0 0 0 chr3R 26450481 26450504 -1454549 + AT_rich Low_complexity Low_complexity 1 23 0 5 786 559 244 6 6 chr3R 26455791 26455952 -1449101 + XDMR_DM Unknown Unknown 189 349 -11 5 786 524 247 47 39 chr3R 26455797 26456029 -1449024 - SAR_DM Satellite Satellite -620 852 619 5 786 319 230 0 0 chr3R 26455969 26456043 -1449010 + XDMR_DM Unknown Unknown 7 80 -280 5 786 24 32 0 0 chr3R 26459243 26459274 -1445779 + AT_rich Low_complexity Low_complexity 1 31 0 5 787 210 71 0 0 chr3R 26487311 26487339 -1417714 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 787 24 0 0 0 chr3R 26489172 26489196 -1415857 + AT_rich Low_complexity Low_complexity 1 24 0 5 787 258 32 0 0 chr3R 26491062 26491093 -1413960 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 787 21 0 0 0 chr3R 26491501 26491522 -1413531 + AT_rich Low_complexity Low_complexity 1 21 0 5 787 180 0 0 0 chr3R 26492024 26492044 -1413009 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 787 216 0 0 0 chr3R 26493402 26493426 -1411627 + (CATCG)n Simple_repeat Simple_repeat 2 25 0 5 787 219 236 0 0 chr3R 26495109 26495164 -1409889 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 787 198 171 0 0 chr3R 26496859 26496900 -1408153 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 5 787 192 97 0 0 chr3R 26499640 26499671 -1405382 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 787 3766 0 0 0 chr3R 26505295 26505694 -1399359 + BLOOD_LTR LTR Gypsy 1 399 0 5 787 60199 0 0 1 chr3R 26505694 26512308 -1392745 + BLOOD_I LTR Gypsy 1 6613 0 5 787 3766 0 0 0 chr3R 26512308 26512707 -1392346 + BLOOD_LTR LTR Gypsy 1 399 0 5 787 22 0 0 0 chr3R 26515588 26515610 -1389443 + AT_rich Low_complexity Low_complexity 1 22 0 5 787 22 70 0 0 chr3R 26529366 26529409 -1375644 + AT_rich Low_complexity Low_complexity 1 43 0 5 787 24 0 0 0 chr3R 26536549 26536573 -1368480 + AT_rich Low_complexity Low_complexity 1 24 0 5 787 227 208 55 14 chr3R 26540542 26540615 -1364438 + ROO_I LTR Pao 661 736 -7520 5 787 195 42 0 0 chr3R 26540897 26540921 -1364132 + (TATAG)n Simple_repeat Simple_repeat 2 25 0 5 787 189 0 0 0 chr3R 26542983 26543004 -1362049 + (CATATA)n Simple_repeat Simple_repeat 5 25 0 5 787 216 239 0 0 chr3R 26543391 26543437 -1361616 + C-rich Low_complexity Low_complexity 4 49 0 5 787 25 31 0 0 chr3R 26558918 26558950 -1346103 + AT_rich Low_complexity Low_complexity 1 32 0 5 787 29 70 0 0 chr3R 26560513 26560570 -1344483 + AT_rich Low_complexity Low_complexity 1 57 0 5 787 240 35 0 0 chr3R 26561857 26561886 -1343167 + (TGGA)n Simple_repeat Simple_repeat 4 32 0 5 787 21 36 0 0 chr3R 26563690 26563718 -1341335 + AT_rich Low_complexity Low_complexity 1 28 0 5 787 22 0 0 0 chr3R 26567704 26567726 -1337327 + AT_rich Low_complexity Low_complexity 1 22 0 5 787 21 0 0 0 chr3R 26579070 26579091 -1325962 + AT_rich Low_complexity Low_complexity 1 21 0 5 787 234 91 0 0 chr3R 26580157 26580190 -1324863 + (TATAG)n Simple_repeat Simple_repeat 3 35 0 5 787 207 265 0 0 chr3R 26580227 26580276 -1324777 + (GCTTG)n Simple_repeat Simple_repeat 5 53 0 5 787 21 0 0 0 chr3R 26585102 26585123 -1319930 + AT_rich Low_complexity Low_complexity 1 21 0 5 787 24 32 0 0 chr3R 26587358 26587389 -1317664 + AT_rich Low_complexity Low_complexity 1 31 0 5 787 180 125 0 0 chr3R 26587926 26587958 -1317095 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 787 217 68 45 0 chr3R 26588939 26588983 -1316070 + (CCA)n Simple_repeat Simple_repeat 3 48 0 5 787 276 100 0 0 chr3R 26593550 26593590 -1311463 + (CAGC)n Simple_repeat Simple_repeat 3 42 0 5 787 216 104 0 115 chr3R 26595707 26595794 -1309259 + (CAG)n Simple_repeat Simple_repeat 3 79 0 5 787 186 43 0 0 chr3R 26596223 26596246 -1308807 + (ATTCG)n Simple_repeat Simple_repeat 5 27 0 5 787 219 146 0 0 chr3R 26596396 26596437 -1308616 + (T)n Simple_repeat Simple_repeat 1 41 0 5 787 201 121 0 0 chr3R 26598863 26598896 -1306157 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 5 787 265 267 0 0 chr3R 26599793 26599920 -1305133 + (CAA)n Simple_repeat Simple_repeat 1 127 0 5 787 354 107 0 0 chr3R 26600110 26600166 -1304887 + (CAG)n Simple_repeat Simple_repeat 1 56 0 5 787 225 0 0 0 chr3R 26601088 26601113 -1303940 + (A)n Simple_repeat Simple_repeat 1 25 0 5 787 249 83 0 0 chr3R 26601503 26601539 -1303514 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 787 189 0 0 0 chr3R 26603742 26603763 -1301290 + (CAT)n Simple_repeat Simple_repeat 1 21 0 5 787 273 128 0 0 chr3R 26607002 26607049 -1298004 + (TCCG)n Simple_repeat Simple_repeat 3 49 0 5 788 204 220 0 0 chr3R 26610264 26610314 -1294739 + (CAG)n Simple_repeat Simple_repeat 1 50 0 5 788 211 191 0 0 chr3R 26610720 26610762 -1294291 + GA-rich Low_complexity Low_complexity 2 43 0 5 788 255 79 0 0 chr3R 26612099 26612137 -1292916 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 788 240 111 0 0 chr3R 26614077 26614113 -1290940 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 788 40 49 0 0 chr3R 26614936 26614997 -1290056 + AT_rich Low_complexity Low_complexity 1 61 0 5 788 241 100 20 20 chr3R 26616462 26616513 -1288540 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 788 213 183 13 53 chr3R 26618606 26618681 -1286372 + (TTG)n Simple_repeat Simple_repeat 2 73 0 5 788 497 102 0 33 chr3R 26618819 26618910 -1286143 + (CTG)n Simple_repeat Simple_repeat 3 90 0 5 788 229 111 0 53 chr3R 26619024 26619081 -1285972 + (CTG)n Simple_repeat Simple_repeat 3 56 0 5 788 230 302 0 22 chr3R 26620561 26620645 -1284408 + GA-rich Low_complexity Low_complexity 1 82 0 5 788 22 0 0 0 chr3R 26621066 26621088 -1283965 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 219 187 64 39 chr3R 26623185 26623263 -1281790 + A-rich Low_complexity Low_complexity 1 80 0 5 788 222 37 0 0 chr3R 26625965 26625992 -1279061 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 788 183 42 0 0 chr3R 26626040 26626064 -1278989 + (TTA)n Simple_repeat Simple_repeat 2 25 0 5 788 22 0 0 0 chr3R 26626900 26626922 -1278131 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 198 174 0 0 chr3R 26629048 26629094 -1275959 + GA-rich Low_complexity Low_complexity 1 46 0 5 788 233 185 0 15 chr3R 26630014 26630080 -1274973 + (CAA)n Simple_repeat Simple_repeat 1 65 0 5 788 264 59 0 0 chr3R 26630226 26630260 -1274793 + (TAG)n Simple_repeat Simple_repeat 1 34 0 5 788 221 257 0 39 chr3R 26631840 26631917 -1273136 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 788 189 94 0 0 chr3R 26634789 26634821 -1270232 + (A)n Simple_repeat Simple_repeat 1 32 0 5 788 287 113 0 19 chr3R 26637320 26637374 -1267679 + (TTTTTA)n Simple_repeat Simple_repeat 2 54 0 5 788 204 40 0 0 chr3R 26638059 26638084 -1266969 + (TGGA)n Simple_repeat Simple_repeat 3 27 0 5 788 26 30 0 0 chr3R 26642332 26642365 -1262688 + AT_rich Low_complexity Low_complexity 1 33 0 5 788 231 300 10 0 chr3R 26643616 26643716 -1261337 + (CAG)n Simple_repeat Simple_repeat 2 102 0 5 788 5680 26 25 1 chr3R 26644589 26645274 -1259779 + PROTOP DNA P 1 701 -3779 5 788 910 0 0 0 chr3R 26645274 26645377 -1259676 + PROTOP DNA P 1956 2058 -2422 5 788 6285 15 0 0 chr3R 26645378 26646094 -1258959 + PROTOP DNA P 3765 4480 0 5 788 180 152 0 0 chr3R 26649479 26649512 -1255541 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 5 788 219 175 0 0 chr3R 26656834 26656891 -1248162 + (CAACT)n Simple_repeat Simple_repeat 4 60 0 5 788 24 0 0 0 chr3R 26657636 26657660 -1247393 + AT_rich Low_complexity Low_complexity 1 24 0 5 788 22 35 0 0 chr3R 26659044 26659073 -1245980 + AT_rich Low_complexity Low_complexity 1 29 0 5 788 26 50 0 0 chr3R 26660439 26660479 -1244574 + AT_rich Low_complexity Low_complexity 1 40 0 5 788 203 204 0 22 chr3R 26662621 26662666 -1242387 + (TTGG)n Simple_repeat Simple_repeat 3 46 0 5 788 267 162 108 36 chr3R 26665581 26665664 -1239389 + ROO_I LTR Pao 631 719 -7537 5 788 207 0 0 0 chr3R 26666477 26666500 -1238553 + (TGG)n Simple_repeat Simple_repeat 2 24 0 5 788 25 0 0 0 chr3R 26669040 26669065 -1235988 + AT_rich Low_complexity Low_complexity 1 25 0 5 788 26 0 0 0 chr3R 26670786 26670812 -1234241 + AT_rich Low_complexity Low_complexity 1 26 0 5 788 35 41 0 0 chr3R 26677064 26677113 -1227940 + AT_rich Low_complexity Low_complexity 1 49 0 5 788 28 48 0 0 chr3R 26681604 26681646 -1223407 + AT_rich Low_complexity Low_complexity 1 42 0 5 788 246 174 0 0 chr3R 26685158 26685204 -1219849 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 5 788 273 220 65 41 chr3R 26694172 26694295 -1210758 + (CCCCAG)n Simple_repeat Simple_repeat 2 127 0 5 788 211 225 0 66 chr3R 26695560 26695636 -1209417 + T-rich Low_complexity Low_complexity 1 71 0 5 788 21 0 0 0 chr3R 26696214 26696235 -1208818 + AT_rich Low_complexity Low_complexity 1 21 0 5 788 252 186 14 14 chr3R 26700349 26700420 -1204633 - ROO_I LTR Pao -7543 713 643 5 788 22 0 0 0 chr3R 26700869 26700891 -1204162 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 186 43 0 0 chr3R 26700927 26700950 -1204103 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 788 27 0 0 0 chr3R 26702802 26702829 -1202224 + AT_rich Low_complexity Low_complexity 1 27 0 5 788 303 71 0 0 chr3R 26703422 26703464 -1201589 + (CTG)n Simple_repeat Simple_repeat 1 42 0 5 788 336 134 0 58 chr3R 26703934 26704021 -1201032 - ROO_I LTR Pao -7532 724 643 5 788 242 176 0 0 chr3R 26704040 26704108 -1200945 - ROO_I LTR Pao -7533 723 656 5 788 510 61 0 0 chr3R 26705380 26705446 -1199607 + (CTG)n Simple_repeat Simple_repeat 3 68 0 5 788 203 171 0 0 chr3R 26705447 26705482 -1199571 + (TTG)n Simple_repeat Simple_repeat 1 35 0 5 788 24 53 0 0 chr3R 26705634 26705672 -1199381 + AT_rich Low_complexity Low_complexity 1 38 0 5 788 201 175 25 0 chr3R 26706904 26706944 -1198109 + CT-rich Low_complexity Low_complexity 1 41 0 5 788 29 0 0 0 chr3R 26721728 26721757 -1183296 + AT_rich Low_complexity Low_complexity 1 29 0 5 788 234 81 0 0 chr3R 26728484 26728521 -1176532 + (TAGA)n Simple_repeat Simple_repeat 2 38 0 5 788 23 33 0 0 chr3R 26730553 26730583 -1174470 + AT_rich Low_complexity Low_complexity 1 30 0 5 788 213 171 0 24 chr3R 26731308 26731350 -1173703 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 788 22 0 0 0 chr3R 26731563 26731585 -1173468 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 22 35 0 0 chr3R 26737279 26737308 -1167745 + AT_rich Low_complexity Low_complexity 1 29 0 5 788 207 179 0 0 chr3R 26738173 26738212 -1166841 + GA-rich Low_complexity Low_complexity 5 43 0 5 789 22 0 0 0 chr3R 26739955 26739977 -1165076 + AT_rich Low_complexity Low_complexity 1 22 0 5 789 195 69 0 0 chr3R 26740745 26740774 -1164279 + (TTTCG)n Simple_repeat Simple_repeat 4 32 0 5 789 247 219 16 0 chr3R 26745046 26745110 -1159943 + A-rich Low_complexity Low_complexity 2 66 0 5 789 21 36 0 0 chr3R 26745504 26745532 -1159521 + AT_rich Low_complexity Low_complexity 1 28 0 5 789 258 183 0 0 chr3R 26753546 26753617 -1151436 + (ATGGTG)n Simple_repeat Simple_repeat 3 73 0 5 789 216 97 0 0 chr3R 26755707 26755738 -1149315 + (CAA)n Simple_repeat Simple_repeat 1 31 0 5 789 237 65 0 0 chr3R 26756274 26756305 -1148748 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 5 789 294 73 0 0 chr3R 26757400 26757441 -1147612 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 789 21 0 0 0 chr3R 26757501 26757522 -1147531 + AT_rich Low_complexity Low_complexity 1 21 0 5 789 21 36 0 0 chr3R 26758956 26758984 -1146069 + AT_rich Low_complexity Low_complexity 1 28 0 5 789 211 143 0 23 chr3R 26769292 26769335 -1135718 + (TTAAA)n Simple_repeat Simple_repeat 3 44 0 5 789 319 320 38 30 chr3R 26772648 26772915 -1132138 - XDMR Unknown Unknown -92 269 1 5 789 470 252 42 38 chr3R 26772754 26772993 -1132060 + SAR_DM Satellite Satellite 194 433 -1039 5 789 192 77 0 0 chr3R 26776232 26776258 -1128795 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 789 21 0 0 0 chr3R 26794060 26794081 -1110972 + AT_rich Low_complexity Low_complexity 1 21 0 5 789 37 0 0 0 chr3R 26801368 26801405 -1103648 + AT_rich Low_complexity Low_complexity 1 37 0 5 789 21 57 0 0 chr3R 26802988 26803023 -1102030 + AT_rich Low_complexity Low_complexity 1 35 0 5 789 206 200 67 0 chr3R 26803728 26803788 -1101265 + (CAG)n Simple_repeat Simple_repeat 1 64 0 5 789 23 0 0 0 chr3R 26804157 26804180 -1100873 + AT_rich Low_complexity Low_complexity 1 23 0 5 789 26 30 0 0 chr3R 26805704 26805737 -1099316 + AT_rich Low_complexity Low_complexity 1 33 0 5 789 189 0 0 0 chr3R 26807049 26807070 -1097983 + (CATTT)n Simple_repeat Simple_repeat 1 21 0 5 789 27 0 0 0 chr3R 26808274 26808301 -1096752 + AT_rich Low_complexity Low_complexity 1 27 0 5 789 22 0 0 0 chr3R 26809733 26809755 -1095298 + AT_rich Low_complexity Low_complexity 1 22 0 5 789 258 32 0 0 chr3R 26812841 26812872 -1092181 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 789 23 33 0 0 chr3R 26817391 26817421 -1087632 + AT_rich Low_complexity Low_complexity 1 30 0 5 789 23 33 0 0 chr3R 26823493 26823523 -1081530 + AT_rich Low_complexity Low_complexity 1 30 0 5 789 217 143 35 18 chr3R 26837914 26837971 -1067082 + (TTA)n Simple_repeat Simple_repeat 2 59 0 5 789 25 0 0 0 chr3R 26845533 26845558 -1059495 + AT_rich Low_complexity Low_complexity 1 25 0 5 789 186 133 0 0 chr3R 26851215 26851245 -1053808 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 5 789 204 267 0 0 chr3R 26858006 26858066 -1046987 + (CACTC)n Simple_repeat Simple_repeat 2 61 0 5 789 25 31 0 0 chr3R 26861628 26861660 -1043393 + AT_rich Low_complexity Low_complexity 1 32 0 5 789 27 29 0 0 chr3R 26864491 26864525 -1040528 + AT_rich Low_complexity Low_complexity 1 34 0 5 789 180 158 0 0 chr3R 26864665 26864703 -1040350 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 789 254 347 0 0 chr3R 26864732 26864807 -1040246 + G-rich Low_complexity Low_complexity 1 75 0 5 789 31 0 0 0 chr3R 26865795 26865826 -1039227 + AT_rich Low_complexity Low_complexity 1 31 0 5 790 777 64 34 68 chr3R 26871474 26871591 -1033462 - DNAREP1_DM LINE Penelope -105 489 377 5 790 339 175 28 55 chr3R 26871893 26872002 -1033051 + ROO_I LTR Pao 638 743 -7513 5 790 21 0 0 0 chr3R 26873613 26873634 -1031419 + AT_rich Low_complexity Low_complexity 1 21 0 5 790 21 36 0 0 chr3R 26874346 26874374 -1030679 + AT_rich Low_complexity Low_complexity 1 28 0 5 790 690 24 0 0 chr3R 26881262 26881346 -1023707 + (TA)n Simple_repeat Simple_repeat 1 84 0 5 790 215 211 14 40 chr3R 26882267 26882341 -1022712 + (CCG)n Simple_repeat Simple_repeat 3 74 0 5 790 223 261 15 0 chr3R 26882554 26882619 -1022434 + (CTG)n Simple_repeat Simple_repeat 3 68 0 5 790 240 35 0 0 chr3R 26885399 26885428 -1019625 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 790 22 35 0 0 chr3R 26889081 26889110 -1015943 + AT_rich Low_complexity Low_complexity 1 29 0 5 790 213 106 0 78 chr3R 26892016 26892067 -1012986 + G-rich Low_complexity Low_complexity 2 48 0 5 790 297 109 0 0 chr3R 26897506 26897552 -1007501 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 790 182 156 22 0 chr3R 26899099 26899144 -1005909 + (CTATA)n Simple_repeat Simple_repeat 1 46 0 5 790 2171 116 57 62 chr3R 26900005 26900411 -1004642 - Gypsy6_LTR LTR Gypsy -3 404 1 5 790 22907 231 21 23 chr3R 26900413 26907128 -997925 - Gypsy6_I LTR Gypsy 0 7012 27 5 790 2161 118 62 55 chr3R 26907144 26907548 -997505 - Gypsy6_LTR LTR Gypsy 0 407 1 5 790 180 163 0 0 chr3R 26908762 26908805 -996248 + (CAG)n Simple_repeat Simple_repeat 3 45 0 5 790 24 0 0 0 chr3R 26909094 26909118 -995935 + AT_rich Low_complexity Low_complexity 1 24 0 5 790 23 0 0 0 chr3R 26910098 26910121 -994932 + AT_rich Low_complexity Low_complexity 1 23 0 5 790 24 0 0 0 chr3R 26910185 26910209 -994844 + AT_rich Low_complexity Low_complexity 1 24 0 5 790 205 242 0 0 chr3R 26912583 26912649 -992404 + (CTG)n Simple_repeat Simple_repeat 1 66 0 5 790 216 0 0 0 chr3R 26923993 26924017 -981036 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 790 180 0 0 0 chr3R 26926939 26926959 -978094 + (TTA)n Simple_repeat Simple_repeat 3 22 0 5 790 29 0 0 62 chr3R 26926999 26927047 -978006 + AT_rich Low_complexity Low_complexity 1 45 0 5 790 22 0 0 0 chr3R 26928809 26928831 -976222 + AT_rich Low_complexity Low_complexity 1 22 0 5 790 205 195 0 0 chr3R 26931000 26931041 -974012 + (CATTT)n Simple_repeat Simple_repeat 1 41 0 5 790 21 36 0 0 chr3R 26932142 26932170 -972883 + AT_rich Low_complexity Low_complexity 1 28 0 5 790 27 29 0 0 chr3R 26932192 26932226 -972827 + AT_rich Low_complexity Low_complexity 1 34 0 5 790 23 54 0 0 chr3R 26935305 26935342 -969711 + AT_rich Low_complexity Low_complexity 1 37 0 5 790 25 31 0 0 chr3R 26938955 26938987 -966066 + AT_rich Low_complexity Low_complexity 1 32 0 5 790 279 0 0 0 chr3R 26945930 26945961 -959092 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 790 22 0 0 0 chr3R 26952323 26952345 -952708 + AT_rich Low_complexity Low_complexity 1 22 0 5 790 23 0 0 0 chr3R 26958734 26958757 -946296 + AT_rich Low_complexity Low_complexity 1 23 0 5 790 33 80 0 0 chr3R 26959731 26959806 -945247 + AT_rich Low_complexity Low_complexity 1 75 0 5 790 335 174 60 49 chr3R 26970613 26970766 -934287 + SAR_DM Satellite Satellite 1 154 -677 5 790 234 173 64 55 chr3R 26970689 26970799 -934254 - XDMR Unknown Unknown -2 359 249 5 790 212 167 0 0 chr3R 26971639 26971675 -933378 + (ATG)n Simple_repeat Simple_repeat 3 38 0 5 790 21 89 0 0 chr3R 26972046 26972102 -932951 + AT_rich Low_complexity Low_complexity 1 56 0 5 790 219 103 0 0 chr3R 26975877 26975916 -929137 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 5 790 227 349 0 0 chr3R 26977580 26977666 -927387 + (CAA)n Simple_repeat Simple_repeat 2 87 0 5 790 260 105 53 0 chr3R 26982108 26982184 -922869 + (TA)n Simple_repeat Simple_repeat 2 81 0 5 790 180 231 0 0 chr3R 26992951 26993003 -912050 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 790 195 42 0 0 chr3R 26994678 26994702 -910351 + (ATTCG)n Simple_repeat Simple_repeat 3 26 0 5 790 180 0 0 0 chr3R 26997018 26997038 -908015 + (GGA)n Simple_repeat Simple_repeat 3 22 0 5 790 207 0 0 0 chr3R 26999399 26999422 -905631 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 791 216 0 0 0 chr3R 27001538 27001562 -903491 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 791 23 33 0 0 chr3R 27016519 27016549 -888504 + AT_rich Low_complexity Low_complexity 1 30 0 5 791 255 258 0 0 chr3R 27019451 27019517 -885536 + (CAG)n Simple_repeat Simple_repeat 1 66 0 5 791 23 33 0 0 chr3R 27020100 27020130 -884923 + AT_rich Low_complexity Low_complexity 1 30 0 5 791 237 33 0 0 chr3R 27020584 27020614 -884439 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 791 31 44 0 0 chr3R 27022250 27022295 -882758 + AT_rich Low_complexity Low_complexity 1 45 0 5 791 198 171 0 0 chr3R 27025363 27025404 -879649 + (CATCC)n Simple_repeat Simple_repeat 3 43 0 5 791 21 0 0 0 chr3R 27031021 27031042 -874011 + AT_rich Low_complexity Low_complexity 1 21 0 5 791 180 0 0 0 chr3R 27042548 27042568 -862485 + (CAAT)n Simple_repeat Simple_repeat 3 22 0 5 791 23 68 0 0 chr3R 27045579 27045623 -859430 + AT_rich Low_complexity Low_complexity 1 44 0 5 791 21 57 0 0 chr3R 27045959 27045994 -859059 + AT_rich Low_complexity Low_complexity 1 35 0 5 791 58 28 0 0 chr3R 27046059 27046131 -858922 + AT_rich Low_complexity Low_complexity 1 72 0 5 791 23 0 0 0 chr3R 27046202 27046225 -858828 + AT_rich Low_complexity Low_complexity 1 23 0 5 791 252 111 0 0 chr3R 27048840 27048885 -856168 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 5 791 297 118 0 0 chr3R 27052726 27052777 -852276 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 791 405 133 0 0 chr3R 27053215 27053290 -851763 + (CAG)n Simple_repeat Simple_repeat 3 77 0 5 791 221 242 0 15 chr3R 27053315 27053382 -851671 + (CAG)n Simple_repeat Simple_repeat 2 67 0 5 791 226 174 22 0 chr3R 27054179 27054225 -850828 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 5 791 210 91 0 0 chr3R 27055109 27055142 -849911 + (A)n Simple_repeat Simple_repeat 1 33 0 5 791 21 36 0 0 chr3R 27055299 27055327 -849726 + AT_rich Low_complexity Low_complexity 1 28 0 5 791 28 0 0 0 chr3R 27057143 27057171 -847882 + AT_rich Low_complexity Low_complexity 1 28 0 5 791 192 40 0 0 chr3R 27062878 27062903 -842150 + (TTA)n Simple_repeat Simple_repeat 2 26 0 5 791 274 294 0 0 chr3R 27069145 27069213 -835840 + (CAGT)n Simple_repeat Simple_repeat 1 68 0 5 791 204 111 0 0 chr3R 27069428 27069464 -835589 + (CAT)n Simple_repeat Simple_repeat 1 36 0 5 791 22 35 0 0 chr3R 27082285 27082314 -822739 + AT_rich Low_complexity Low_complexity 1 29 0 5 791 204 67 0 0 chr3R 27087667 27087697 -817356 + (TAG)n Simple_repeat Simple_repeat 2 31 0 5 791 21 36 0 0 chr3R 27087860 27087888 -817165 + AT_rich Low_complexity Low_complexity 1 28 0 5 791 24 0 0 0 chr3R 27098094 27098118 -806935 + AT_rich Low_complexity Low_complexity 1 24 0 5 791 23 0 0 0 chr3R 27101511 27101534 -803519 + AT_rich Low_complexity Low_complexity 1 23 0 5 791 23 0 0 0 chr3R 27102303 27102326 -802727 + AT_rich Low_complexity Low_complexity 1 23 0 5 791 2053 5 0 0 chr3R 27105152 27105376 -799677 + DIVER_LTR LTR Pao 1 224 0 5 791 52742 2 0 0 chr3R 27105397 27111040 -794013 + DIVER_I LTR Pao 1 5643 0 5 791 2053 5 0 0 chr3R 27111040 27111264 -793789 + DIVER_LTR LTR Pao 1 224 0 5 791 21 0 0 0 chr3R 27111691 27111712 -793341 + AT_rich Low_complexity Low_complexity 1 21 0 5 791 300 53 0 0 chr3R 27113227 27113265 -791788 + (CAATT)n Simple_repeat Simple_repeat 5 42 0 5 791 327 104 0 0 chr3R 27117003 27117051 -788002 + (CAGA)n Simple_repeat Simple_repeat 1 48 0 5 791 213 108 0 0 chr3R 27117844 27117881 -787172 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 5 791 186 71 0 0 chr3R 27119439 27119467 -785586 + (CAGTT)n Simple_repeat Simple_repeat 1 28 0 5 791 201 152 0 0 chr3R 27125307 27125340 -779713 + (GTGTG)n Simple_repeat Simple_repeat 3 35 0 5 791 242 186 0 0 chr3R 27126197 27126240 -778813 + (TCTCTG)n Simple_repeat Simple_repeat 1 43 0 5 791 23 33 0 0 chr3R 27126651 27126681 -778372 + AT_rich Low_complexity Low_complexity 1 30 0 5 792 205 233 67 0 chr3R 27132933 27132993 -772060 + (CCCGAA)n Simple_repeat Simple_repeat 4 67 0 5 792 183 156 0 0 chr3R 27133842 27133874 -771179 + T-rich Low_complexity Low_complexity 4 35 0 5 792 198 0 0 0 chr3R 27135515 27135537 -769516 + (ATG)n Simple_repeat Simple_repeat 3 24 0 5 792 25 0 0 0 chr3R 27136540 27136565 -768488 + AT_rich Low_complexity Low_complexity 1 25 0 5 792 204 67 0 0 chr3R 27138330 27138360 -766693 + (CTG)n Simple_repeat Simple_repeat 1 30 0 5 792 201 74 0 0 chr3R 27141739 27141766 -763287 + (TAGA)n Simple_repeat Simple_repeat 3 29 0 5 792 208 147 0 0 chr3R 27147451 27147485 -757568 + (A)n Simple_repeat Simple_repeat 1 34 0 5 792 2442 0 0 0 chr3R 27156212 27156488 -748565 + Copia_LTR LTR Copia 1 276 0 5 792 41743 1 0 0 chr3R 27156488 27161080 -743973 + Copia_I LTR Copia 1 4593 0 5 792 2442 0 0 0 chr3R 27161080 27161356 -743697 + Copia_LTR LTR Copia 1 276 0 5 792 192 97 0 0 chr3R 27162891 27162922 -742131 + (GCCTG)n Simple_repeat Simple_repeat 1 31 0 5 792 279 130 0 0 chr3R 27164598 27164652 -740401 + (CTG)n Simple_repeat Simple_repeat 3 56 0 5 792 201 74 0 0 chr3R 27165869 27165896 -739157 + (ATG)n Simple_repeat Simple_repeat 1 27 0 5 792 225 0 0 0 chr3R 27166383 27166408 -738645 + (CAT)n Simple_repeat Simple_repeat 1 25 0 5 792 23 54 0 0 chr3R 27169050 27169087 -735966 + AT_rich Low_complexity Low_complexity 1 37 0 5 792 204 185 0 0 chr3R 27169796 27169850 -735203 + (CAGTT)n Simple_repeat Simple_repeat 4 57 0 5 792 220 216 0 0 chr3R 27172800 27172851 -732202 + A-rich Low_complexity Low_complexity 1 51 0 5 792 210 118 0 0 chr3R 27172852 27172886 -732167 + (CGAGT)n Simple_repeat Simple_repeat 1 34 0 5 792 189 196 0 0 chr3R 27192750 27192796 -712257 + (CAA)n Simple_repeat Simple_repeat 2 47 0 5 792 225 154 0 0 chr3R 27192976 27193015 -712038 + (CCCGAA)n Simple_repeat Simple_repeat 3 41 0 5 792 189 0 0 0 chr3R 27193119 27193140 -711913 + (CAG)n Simple_repeat Simple_repeat 3 23 0 5 792 231 299 0 0 chr3R 27195712 27195779 -709274 + (CATATA)n Simple_repeat Simple_repeat 3 69 0 5 792 483 138 0 0 chr3R 27196103 27196190 -708863 + (CAG)n Simple_repeat Simple_repeat 3 89 0 5 792 270 152 0 0 chr3R 27196716 27196775 -708278 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 792 207 108 27 0 chr3R 27197481 27197518 -707535 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 792 254 246 0 0 chr3R 27200435 27200500 -704553 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 792 25 65 0 0 chr3R 27206886 27206932 -698121 + AT_rich Low_complexity Low_complexity 1 46 0 5 792 27 49 0 0 chr3R 27217520 27217561 -687492 + AT_rich Low_complexity Low_complexity 1 41 0 5 792 21 57 0 0 chr3R 27224226 27224261 -680792 + AT_rich Low_complexity Low_complexity 1 35 0 5 792 216 250 13 26 chr3R 27231215 27231293 -673760 + (TG)n Simple_repeat Simple_repeat 1 77 0 5 792 183 80 0 0 chr3R 27238249 27238274 -666779 + (CAGCT)n Simple_repeat Simple_repeat 5 29 0 5 792 2405 0 4 0 chr3R 27238866 27239141 -665912 - Copia_LTR LTR Copia 0 276 1 5 792 41577 3 0 0 chr3R 27239141 27243733 -661320 - Copia_I LTR Copia 0 4593 1 5 792 2405 0 4 0 chr3R 27243733 27244008 -661045 - Copia_LTR LTR Copia 0 276 1 5 792 21 0 0 0 chr3R 27244585 27244606 -660447 + AT_rich Low_complexity Low_complexity 1 21 0 5 792 22 35 0 0 chr3R 27244844 27244873 -660180 + AT_rich Low_complexity Low_complexity 1 29 0 5 792 21 0 0 0 chr3R 27246040 27246061 -658992 + AT_rich Low_complexity Low_complexity 1 21 0 5 792 480 72 0 0 chr3R 27246317 27246386 -658667 + (CAT)n Simple_repeat Simple_repeat 2 70 0 5 792 198 71 0 0 chr3R 27249631 27249659 -655394 + (CGAGT)n Simple_repeat Simple_repeat 1 28 0 5 792 213 218 0 0 chr3R 27250876 27250931 -654122 + T-rich Low_complexity Low_complexity 1 55 0 5 792 267 164 0 0 chr3R 27254001 27254062 -650991 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 792 195 114 0 0 chr3R 27257502 27257537 -647516 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 792 218 211 0 19 chr3R 27258465 27258518 -646535 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 793 204 98 0 68 chr3R 27267599 27267643 -637410 + (GGATG)n Simple_repeat Simple_repeat 4 44 0 5 793 21 0 0 0 chr3R 27269395 27269416 -635637 + AT_rich Low_complexity Low_complexity 1 21 0 5 793 243 0 0 0 chr3R 27269545 27269572 -635481 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 793 180 0 0 0 chr3R 27272648 27272668 -632385 + (TATG)n Simple_repeat Simple_repeat 3 22 0 5 793 282 56 0 0 chr3R 27272753 27272789 -632264 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 793 198 143 0 0 chr3R 27278209 27278244 -626809 + (CACTC)n Simple_repeat Simple_repeat 2 36 0 5 793 198 118 0 0 chr3R 27279579 27279613 -625440 + (CAA)n Simple_repeat Simple_repeat 1 34 0 5 793 240 35 0 0 chr3R 27290055 27290084 -614969 + (CATCC)n Simple_repeat Simple_repeat 1 29 0 5 793 208 299 0 29 chr3R 27302005 27302074 -602979 + (CTG)n Simple_repeat Simple_repeat 2 68 0 5 793 237 65 0 0 chr3R 27305009 27305040 -600013 + (ACTG)n Simple_repeat Simple_repeat 2 32 0 5 793 207 0 0 0 chr3R 27308460 27308483 -596570 + (T)n Simple_repeat Simple_repeat 1 23 0 5 793 207 114 0 0 chr3R 27310434 27310469 -594584 + (CCGAA)n Simple_repeat Simple_repeat 1 35 0 5 793 205 171 0 0 chr3R 27316909 27316944 -588109 + CT-rich Low_complexity Low_complexity 2 36 0 5 793 247 258 0 29 chr3R 27318596 27318664 -586389 + (TTCGGG)n Simple_repeat Simple_repeat 4 69 0 5 793 234 0 0 0 chr3R 27332581 27332607 -572446 + (CTTAA)n Simple_repeat Simple_repeat 1 26 0 5 793 180 0 0 0 chr3R 27336369 27336389 -568664 + (AGATG)n Simple_repeat Simple_repeat 5 24 0 5 793 204 97 0 0 chr3R 27337227 27337258 -567795 + (T)n Simple_repeat Simple_repeat 1 31 0 5 793 248 102 0 20 chr3R 27337574 27337624 -567429 + (CATCC)n Simple_repeat Simple_repeat 1 49 0 5 793 197 33 33 0 chr3R 27337786 27337816 -567237 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 5 793 23 0 0 0 chr3R 27344880 27344903 -560150 + AT_rich Low_complexity Low_complexity 1 23 0 5 793 182 191 0 21 chr3R 27345387 27345435 -559618 + (CCCGAA)n Simple_repeat Simple_repeat 5 51 0 5 793 205 171 0 0 chr3R 27347087 27347122 -557931 + GA-rich Low_complexity Low_complexity 2 36 0 5 793 22 0 0 0 chr3R 27355725 27355747 -549306 + GC_rich Low_complexity Low_complexity 1 22 0 5 793 237 65 0 0 chr3R 27358044 27358075 -546978 + (CAGT)n Simple_repeat Simple_repeat 2 32 0 5 793 21 0 0 0 chr3R 27369466 27369487 -535566 + AT_rich Low_complexity Low_complexity 1 21 0 5 793 225 132 0 0 chr3R 27374260 27374298 -530755 + (CAG)n Simple_repeat Simple_repeat 3 40 0 5 793 411 123 0 0 chr3R 27374636 27374717 -530336 + (TCCA)n Simple_repeat Simple_repeat 2 82 0 5 793 200 222 0 0 chr3R 27381347 27381392 -523661 + A-rich Low_complexity Low_complexity 1 45 0 5 793 180 135 0 0 chr3R 27385327 27385364 -519689 + (A)n Simple_repeat Simple_repeat 1 37 0 5 793 24 0 0 0 chr3R 27391853 27391877 -513176 + AT_rich Low_complexity Low_complexity 1 24 0 5 794 25 65 0 0 chr3R 27397478 27397524 -507529 + AT_rich Low_complexity Low_complexity 1 46 0 5 794 22 0 0 0 chr3R 27401567 27401589 -503464 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 189 107 0 0 chr3R 27403774 27403802 -501251 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5 794 23 33 0 0 chr3R 27413975 27414005 -491048 + AT_rich Low_complexity Low_complexity 1 30 0 5 794 183 162 0 0 chr3R 27423777 27423814 -481239 + (ATTG)n Simple_repeat Simple_repeat 3 39 0 5 794 192 167 0 0 chr3R 27424492 27424540 -480513 + T-rich Low_complexity Low_complexity 1 48 0 5 794 186 133 0 0 chr3R 27425814 27425844 -479209 + (CGGA)n Simple_repeat Simple_repeat 2 31 0 5 794 223 315 0 0 chr3R 27427782 27427855 -477198 + (CTG)n Simple_repeat Simple_repeat 3 75 0 5 794 198 0 0 0 chr3R 27428985 27429007 -476046 + (A)n Simple_repeat Simple_repeat 1 22 0 5 794 180 0 0 0 chr3R 27432360 27432380 -472673 + (GAAAA)n Simple_repeat Simple_repeat 3 22 0 5 794 24 32 0 0 chr3R 27438471 27438502 -466551 + AT_rich Low_complexity Low_complexity 1 31 0 5 794 22 0 0 0 chr3R 27438550 27438572 -466481 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 195 100 0 0 chr3R 27438741 27438771 -466282 + (CAG)n Simple_repeat Simple_repeat 3 32 0 5 794 414 100 0 0 chr3R 27439138 27439198 -465855 + (CAG)n Simple_repeat Simple_repeat 3 62 0 5 794 23 33 0 0 chr3R 27440746 27440776 -464277 + AT_rich Low_complexity Low_complexity 1 30 0 5 794 24 32 0 0 chr3R 27443612 27443643 -461410 + AT_rich Low_complexity Low_complexity 1 31 0 5 794 214 239 0 52 chr3R 27448441 27448538 -456515 + (CAG)n Simple_repeat Simple_repeat 2 93 0 5 794 222 208 0 0 chr3R 27451522 27451575 -453478 + (CCAA)n Simple_repeat Simple_repeat 4 56 0 5 794 237 167 0 0 chr3R 27452399 27452453 -452600 + (GTATG)n Simple_repeat Simple_repeat 5 58 0 5 794 234 0 0 0 chr3R 27453105 27453131 -451922 + (A)n Simple_repeat Simple_repeat 1 26 0 5 794 22 0 0 0 chr3R 27454967 27454989 -450064 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 221 154 26 0 chr3R 27457981 27458020 -447033 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 5 794 183 80 0 0 chr3R 27460204 27460229 -444824 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 794 207 125 0 0 chr3R 27462306 27462346 -442707 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 794 189 175 0 0 chr3R 27462861 27462901 -442152 + (CCCGAA)n Simple_repeat Simple_repeat 3 42 0 5 794 203 184 0 0 chr3R 27463764 27463802 -441251 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 794 217 219 0 0 chr3R 27465614 27465655 -439398 + CT-rich Low_complexity Low_complexity 1 41 0 5 794 357 149 0 0 chr3R 27467992 27468059 -436994 + (CCGAA)n Simple_repeat Simple_repeat 2 68 0 5 794 381 287 95 65 chr3R 27477114 27477709 -427344 + SAR_DM Satellite Satellite 1 613 -632 5 794 424 100 0 24 chr3R 27478509 27478591 -426462 + (CAG)n Simple_repeat Simple_repeat 3 82 0 5 794 552 140 0 0 chr3R 27486733 27486840 -418213 + (CAG)n Simple_repeat Simple_repeat 3 109 0 5 794 243 0 0 0 chr3R 27488708 27488735 -416318 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 794 213 39 0 0 chr3R 27488917 27488943 -416110 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 794 21 0 0 0 chr3R 27490282 27490303 -414750 + AT_rich Low_complexity Low_complexity 1 21 0 5 794 215 61 0 29 chr3R 27491325 27491359 -413694 + (GCTTG)n Simple_repeat Simple_repeat 4 36 0 5 794 288 0 0 0 chr3R 27493701 27493733 -411320 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 794 225 188 21 0 chr3R 27493923 27493971 -411082 + (TGGG)n Simple_repeat Simple_repeat 2 50 0 5 794 291 281 128 20 chr3R 27495985 27496134 -408919 - DNAREP1_DM LINE Penelope -6 588 424 5 794 210 37 0 0 chr3R 27499016 27499043 -406010 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 5 794 228 100 0 0 chr3R 27503319 27503359 -401694 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 794 22 0 0 0 chr3R 27506312 27506334 -398719 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 43451 0 0 0 chr3R 27517307 27522017 -383036 + DOC LINE Jockey 15 4722 -3 5 795 203 173 0 19 chr3R 27525934 27525987 -379066 + (TCCA)n Simple_repeat Simple_repeat 4 55 0 5 795 200 191 0 0 chr3R 27526580 27526622 -378431 + (TTAGGC)n Simple_repeat Simple_repeat 3 44 0 5 795 234 0 0 0 chr3R 27528206 27528232 -376821 + (GTGTG)n Simple_repeat Simple_repeat 5 30 0 5 795 231 36 0 0 chr3R 27529336 27529364 -375689 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 795 27 0 0 0 chr3R 27530419 27530446 -374607 + AT_rich Low_complexity Low_complexity 1 27 0 5 795 225 197 16 0 chr3R 27534874 27534935 -370118 + (CAG)n Simple_repeat Simple_repeat 3 64 0 5 795 226 178 22 0 chr3R 27538965 27539010 -366043 + CT-rich Low_complexity Low_complexity 2 47 0 5 795 24 32 0 0 chr3R 27541815 27541846 -363207 + AT_rich Low_complexity Low_complexity 1 31 0 5 795 22 0 0 0 chr3R 27544164 27544186 -360867 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 212 189 38 0 chr3R 27549019 27549072 -355981 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 5 795 183 80 0 0 chr3R 27549689 27549714 -355339 + (CAA)n Simple_repeat Simple_repeat 3 27 0 5 795 25 0 0 0 chr3R 27551595 27551620 -353433 + AT_rich Low_complexity Low_complexity 1 25 0 5 795 26 50 0 0 chr3R 27553218 27553258 -351795 + AT_rich Low_complexity Low_complexity 1 40 0 5 795 236 77 26 0 chr3R 27557536 27557575 -347478 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 5 795 202 148 0 36 chr3R 27568027 27568083 -336970 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 795 21 36 0 0 chr3R 27569876 27569904 -335149 + AT_rich Low_complexity Low_complexity 1 28 0 5 795 31 26 0 0 chr3R 27569949 27569987 -335066 + AT_rich Low_complexity Low_complexity 1 38 0 5 795 22 0 0 0 chr3R 27574775 27574797 -330256 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 180 0 0 0 chr3R 27575200 27575220 -329833 + (GGAGAA)n Simple_repeat Simple_repeat 1 20 0 5 795 21 71 0 0 chr3R 27580887 27580929 -324124 + AT_rich Low_complexity Low_complexity 1 42 0 5 795 243 0 0 0 chr3R 27583698 27583725 -321328 + (TGG)n Simple_repeat Simple_repeat 1 27 0 5 795 180 111 0 0 chr3R 27588161 27588188 -316865 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 5 795 231 146 0 0 chr3R 27589765 27589806 -315247 + (CCA)n Simple_repeat Simple_repeat 2 42 0 5 795 204 216 0 0 chr3R 27589911 27590006 -315047 + (CCG)n Simple_repeat Simple_repeat 1 95 0 5 795 23 68 0 0 chr3R 27595027 27595071 -309982 + AT_rich Low_complexity Low_complexity 1 44 0 5 795 21 0 0 0 chr3R 27597992 27598013 -307040 + AT_rich Low_complexity Low_complexity 1 21 0 5 795 24 67 0 0 chr3R 27602521 27602566 -302487 + AT_rich Low_complexity Low_complexity 1 45 0 5 795 180 0 0 0 chr3R 27604899 27604919 -300134 + (A)n Simple_repeat Simple_repeat 1 20 0 5 795 23 78 0 0 chr3R 27605012 27605063 -299990 + AT_rich Low_complexity Low_complexity 1 51 0 5 795 22 0 0 0 chr3R 27610522 27610544 -294509 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 243 125 0 0 chr3R 27614469 27614509 -290544 + (CAG)n Simple_repeat Simple_repeat 2 41 0 5 795 22 0 0 0 chr3R 27616779 27616801 -288252 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 267 173 0 0 chr3R 27624750 27624802 -280251 + (CAA)n Simple_repeat Simple_repeat 1 52 0 5 795 180 77 0 0 chr3R 27634684 27634710 -270343 + (A)n Simple_repeat Simple_repeat 1 26 0 5 795 21 0 0 0 chr3R 27655518 27655539 -249514 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 248 0 31 0 chr3R 27663874 27663906 -241147 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 796 233 221 123 19 chr3R 27664075 27664181 -240872 + DNAREP1_DM LINE Penelope 172 288 -306 5 796 21 36 0 0 chr3R 27668857 27668885 -236168 + AT_rich Low_complexity Low_complexity 1 28 0 5 796 24 0 0 0 chr3R 27671641 27671665 -233388 + AT_rich Low_complexity Low_complexity 1 24 0 5 796 28 48 0 0 chr3R 27672301 27672343 -232710 + AT_rich Low_complexity Low_complexity 1 42 0 5 796 38 61 0 0 chr3R 27672714 27672780 -232273 + AT_rich Low_complexity Low_complexity 1 66 0 5 796 25 0 0 0 chr3R 27674266 27674291 -230762 + AT_rich Low_complexity Low_complexity 1 25 0 5 796 21 0 0 0 chr3R 27675630 27675651 -229402 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 30 45 0 0 chr3R 27678733 27678777 -226276 + AT_rich Low_complexity Low_complexity 1 44 0 5 796 23 0 0 0 chr3R 27681879 27681902 -223151 + AT_rich Low_complexity Low_complexity 1 23 0 5 796 27 0 0 0 chr3R 27688629 27688656 -216397 + AT_rich Low_complexity Low_complexity 1 27 0 5 796 22 0 0 0 chr3R 27690703 27690725 -214328 + AT_rich Low_complexity Low_complexity 1 22 0 5 796 226 267 0 0 chr3R 27697982 27698042 -207011 + (CAG)n Simple_repeat Simple_repeat 3 62 0 5 796 21 0 0 0 chr3R 27702914 27702935 -202118 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 21 0 0 0 chr3R 27707878 27707899 -197154 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 198 103 0 0 chr3R 27712600 27712629 -192424 + (CACTC)n Simple_repeat Simple_repeat 2 30 0 5 796 8353 66 15 6 chr3R 27713520 27714611 -190442 - FB4_DM DNA Tc1 -1329 2760 1660 5 796 3994 2 0 0 chr3R 27714616 27715044 -190009 - ROO_LTR LTR Pao 0 428 1 5 796 10861 2 10 0 chr3R 27715044 27716250 -188803 - ROO_I LTR Pao 0 8256 7039 5 796 51252 3 3 2 chr3R 27716242 27721950 -183103 - ROO_I LTR Pao -2545 5711 1 5 796 3994 2 0 0 chr3R 27721950 27722378 -182675 - ROO_LTR LTR Pao 0 428 1 5 796 4419 44 6 7 chr3R 27722381 27722928 -182125 - FB4_DM DNA Tc1 -2437 1652 1107 5 796 189 0 0 0 chr3R 27727532 27727553 -177500 + (CATA)n Simple_repeat Simple_repeat 2 22 0 5 796 236 259 0 0 chr3R 27727880 27727938 -177115 + (CTG)n Simple_repeat Simple_repeat 2 59 0 5 796 21 0 0 0 chr3R 27738350 27738371 -166682 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 34 55 0 0 chr3R 27741750 27741805 -163248 + AT_rich Low_complexity Low_complexity 1 55 0 5 796 25 0 0 0 chr3R 27751320 27751345 -153708 + AT_rich Low_complexity Low_complexity 1 25 0 5 796 26 64 0 0 chr3R 27755086 27755133 -149920 + AT_rich Low_complexity Low_complexity 1 47 0 5 796 29 0 0 0 chr3R 27755647 27755676 -149377 + AT_rich Low_complexity Low_complexity 1 29 0 5 796 192 135 0 0 chr3R 27757225 27757262 -147791 + (CAA)n Simple_repeat Simple_repeat 3 39 0 5 796 310 247 5 70 chr3R 27758099 27758286 -146767 + (CTG)n Simple_repeat Simple_repeat 3 177 0 5 796 234 247 0 56 chr3R 27762068 27762158 -142895 + T-rich Low_complexity Low_complexity 1 85 0 5 796 23 0 0 0 chr3R 27766601 27766624 -138429 + AT_rich Low_complexity Low_complexity 1 23 0 5 796 22 0 0 0 chr3R 27767168 27767190 -137863 + AT_rich Low_complexity Low_complexity 1 22 0 5 796 185 132 0 26 chr3R 27769578 27769617 -135436 + A-rich Low_complexity Low_complexity 6 43 0 5 796 25 51 0 0 chr3R 27778749 27778788 -126265 + AT_rich Low_complexity Low_complexity 1 39 0 5 796 349 155 0 0 chr3R 27779613 27779671 -125382 + DMCR1A LINE CR1 4379 4436 -34 5 796 24 0 0 0 chr3R 27779741 27779765 -125288 + AT_rich Low_complexity Low_complexity 1 24 0 5 796 743 0 11 0 chr3R 27780699 27780786 -124267 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 796 1620 44 47 27 chr3R 27780792 27781242 -123811 + (TATAA)n Simple_repeat Simple_repeat 1 459 0 5 796 32 36 0 18 chr3R 27781242 27781265 -123788 + AT_rich Low_complexity Low_complexity 1 23 0 5 796 578 0 42 0 chr3R 27781265 27781337 -123716 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 5 796 32 36 0 18 chr3R 27781337 27781370 -123683 + AT_rich Low_complexity Low_complexity 1 33 0 5 796 948 116 165 23 chr3R 27783096 27783272 -121781 - DNAREP1_DM LINE Penelope -8 586 386 5 796 24 0 0 0 chr3R 27783291 27783315 -121738 + AT_rich Low_complexity Low_complexity 1 24 0 5 796 587 100 0 0 chr3R 27783420 27783500 -121553 - DNAREP1_DM LINE Penelope -514 80 1 5 796 22 0 0 0 chr3R 27783733 27783755 -121298 + AT_rich Low_complexity Low_complexity 1 22 0 5 797 23 33 0 0 chr3R 27788189 27788219 -116834 + AT_rich Low_complexity Low_complexity 1 30 0 5 797 418 145 0 28 chr3R 27793402 27793473 -111580 - DNAREP1_DM LINE Penelope -525 69 1 5 797 1480 103 72 8 chr3R 27794439 27794704 -110349 + DNAREP1_DM LINE Penelope 1 282 -312 5 797 21 0 0 0 chr3R 27795434 27795455 -109598 + AT_rich Low_complexity Low_complexity 1 21 0 5 797 1745 107 207 13 chr3R 27797634 27798026 -107027 + DNAREP1_DM LINE Penelope 24 594 0 5 797 180 179 0 0 chr3R 27799390 27799429 -105624 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 797 22 35 0 0 chr3R 27801729 27801758 -103295 + AT_rich Low_complexity Low_complexity 1 29 0 5 797 218 176 0 19 chr3R 27813627 27813679 -91374 + (CATA)n Simple_repeat Simple_repeat 2 52 0 5 797 24 0 0 0 chr3R 27813922 27813946 -91107 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 27 29 0 0 chr3R 27814068 27814102 -90951 + AT_rich Low_complexity Low_complexity 1 34 0 5 797 21 36 0 0 chr3R 27814830 27814858 -90195 + AT_rich Low_complexity Low_complexity 1 28 0 5 797 204 40 0 0 chr3R 27817844 27817869 -87184 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 5 797 241 52 104 0 chr3R 27818356 27818433 -86620 + (TA)n Simple_repeat Simple_repeat 1 85 0 5 797 31 58 0 0 chr3R 27818497 27818549 -86504 + AT_rich Low_complexity Low_complexity 1 52 0 5 797 26 30 0 0 chr3R 27819421 27819454 -85599 + AT_rich Low_complexity Low_complexity 1 33 0 5 797 27 0 0 0 chr3R 27819911 27819938 -85115 + AT_rich Low_complexity Low_complexity 1 27 0 5 797 679 116 292 27 chr3R 27820781 27820966 -84087 - DNAREP1_DM LINE Penelope 0 594 361 5 797 272 123 27 110 chr3R 27821957 27822030 -83023 + DNAREP1_DM LINE Penelope 16 82 -512 5 797 224 111 41 82 chr3R 27823102 27823200 -81853 + (TTAA)n Simple_repeat Simple_repeat 3 96 0 5 797 33 43 0 0 chr3R 27823254 27823301 -81752 + AT_rich Low_complexity Low_complexity 1 47 0 5 797 3650 0 0 5 chr3R 27823768 27824169 -80884 + BLOOD_LTR LTR Gypsy 1 399 0 5 797 58955 0 0 0 chr3R 27824169 27830780 -74273 + BLOOD_I LTR Gypsy 1 6613 0 5 797 3650 0 0 5 chr3R 27830780 27831181 -73872 + BLOOD_LTR LTR Gypsy 1 399 0 5 797 23 33 0 0 chr3R 27831260 27831290 -73763 + AT_rich Low_complexity Low_complexity 1 30 0 5 797 936 147 444 26 chr3R 27831717 27832136 -72917 + DNAREP1_DM LINE Penelope 1 594 0 5 797 24 32 0 0 chr3R 27832549 27832580 -72473 + AT_rich Low_complexity Low_complexity 1 31 0 5 797 21 0 0 0 chr3R 27832765 27832786 -72267 + AT_rich Low_complexity Low_complexity 1 21 0 5 797 464 259 104 26 chr3R 27833590 27833820 -71233 - DNAREP1_DM LINE Penelope -187 407 160 5 797 512 131 83 0 chr3R 27833817 27833901 -71152 + DNAREP1_DM LINE Penelope 503 593 -1 5 797 24 0 0 0 chr3R 27834449 27834473 -70580 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 24 0 0 0 chr3R 27834656 27834680 -70373 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 319 239 53 60 chr3R 27834774 27834925 -70128 + DNAREP1_DM LINE Penelope 7 156 -438 5 797 421 152 205 4 chr3R 27834926 27835042 -70011 + DNAREP1_DM LINE Penelope 341 453 -141 5 797 26 64 0 0 chr3R 27837551 27837598 -67455 + AT_rich Low_complexity Low_complexity 1 47 0 5 797 58 15 0 0 chr3R 27839273 27839338 -65715 + AT_rich Low_complexity Low_complexity 1 65 0 5 797 22 0 0 0 chr3R 27842289 27842311 -62742 + AT_rich Low_complexity Low_complexity 1 22 0 5 797 22 35 0 0 chr3R 27846464 27846493 -58560 + AT_rich Low_complexity Low_complexity 1 29 0 5 797 618 189 213 39 chr3R 27854025 27854279 -50774 + DNAREP1_DM LINE Penelope 2 299 -295 5 797 45 0 0 0 chr3R 27854404 27854449 -50604 + AT_rich Low_complexity Low_complexity 1 45 0 5 797 27 29 0 0 chr3R 27855454 27855488 -49565 + AT_rich Low_complexity Low_complexity 1 34 0 5 797 35 0 0 0 chr3R 27856803 27856838 -48215 + AT_rich Low_complexity Low_complexity 1 35 0 5 797 23 0 0 0 chr3R 27857293 27857316 -47737 + AT_rich Low_complexity Low_complexity 1 23 0 5 797 600 255 124 16 chr3R 27857461 27857781 -47272 - DNAREP1_DM LINE Penelope -104 490 3 5 797 26 0 0 0 chr3R 27858731 27858757 -46296 + AT_rich Low_complexity Low_complexity 1 26 0 5 797 252 236 0 27 chr3R 27860599 27860673 -44380 + DNAREP1_DM LINE Penelope 499 570 -24 5 797 1877 88 88 7 chr3R 27863067 27863363 -41690 - DNAREP1_DM LINE Penelope 0 594 275 5 797 1040 97 0 0 chr3R 27863403 27863558 -41495 - DNAREP1_DM LINE Penelope -439 155 1 5 797 32 43 0 0 chr3R 27867901 27867947 -37106 + AT_rich Low_complexity Low_complexity 1 46 0 5 797 42 0 0 0 chr3R 27868027 27868069 -36984 + AT_rich Low_complexity Low_complexity 1 42 0 5 797 24 53 0 0 chr3R 27868109 27868147 -36906 + AT_rich Low_complexity Low_complexity 1 38 0 5 797 926 56 210 0 chr3R 27870057 27870200 -34853 - DNAREP1_DM LINE Penelope -9 585 413 5 797 763 78 103 0 chr3R 27870195 27870311 -34742 - DNAREP1_DM LINE Penelope -466 128 1 5 797 32 86 0 0 chr3R 27870703 27870784 -34269 + AT_rich Low_complexity Low_complexity 1 81 0 5 797 229 186 0 0 chr3R 27871559 27871602 -33451 + DNAREP1_DM LINE Penelope 551 593 -1 5 797 27 62 0 0 chr3R 27871747 27871795 -33258 + AT_rich Low_complexity Low_complexity 1 48 0 5 797 21 36 0 0 chr3R 27872259 27872287 -32766 + AT_rich Low_complexity Low_complexity 1 28 0 5 797 23 33 0 0 chr3R 27872969 27872999 -32054 + AT_rich Low_complexity Low_complexity 1 30 0 5 797 30 27 0 0 chr3R 27873076 27873113 -31940 + AT_rich Low_complexity Low_complexity 1 37 0 5 797 382 178 156 0 chr3R 27873801 27873891 -31162 + DNAREP1_DM LINE Penelope 424 527 -67 5 797 22 80 0 0 chr3R 27873929 27873979 -31074 + AT_rich Low_complexity Low_complexity 1 50 0 5 797 27 73 0 0 chr3R 27874064 27874119 -30934 + AT_rich Low_complexity Low_complexity 1 55 0 5 797 344 125 16 0 chr3R 27875767 27875831 -29222 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 797 27 29 0 0 chr3R 27878000 27878034 -27019 + AT_rich Low_complexity Low_complexity 1 34 0 5 797 30 45 0 43 chr3R 27878151 27878221 -26832 + AT_rich Low_complexity Low_complexity 1 67 0 5 797 245 258 0 0 chr3R 27878990 27879056 -25997 + (ATG)n Simple_repeat Simple_repeat 3 68 0 5 797 24 85 0 0 chr3R 27880928 27880987 -24066 + AT_rich Low_complexity Low_complexity 1 59 0 5 797 21 57 0 0 chr3R 27881706 27881741 -23312 + AT_rich Low_complexity Low_complexity 1 35 0 5 797 22 80 0 0 chr3R 27882381 27882431 -22622 + AT_rich Low_complexity Low_complexity 1 50 0 5 797 22 0 0 0 chr3R 27882695 27882717 -22336 + AT_rich Low_complexity Low_complexity 1 22 0 5 797 490 86 0 0 chr3R 27885538 27885608 -19445 - DNAREP1_DM LINE Penelope 0 594 525 5 797 425 157 61 53 chr3R 27885606 27885720 -19333 - DNAREP1_DM LINE Penelope -288 306 192 5 797 282 30 0 0 chr3R 27885726 27885759 -19294 - DNAREP1_DM LINE Penelope -561 33 1 5 797 386 33 0 0 chr3R 27888357 27888418 -16635 - IVK_DM LINE I -7 5395 5335 5 797 24 0 0 0 chr3R 27888429 27888453 -16600 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 1330 122 71 12 chr3R 27890057 27890297 -14756 + DNAREP1_DM LINE Penelope 1 254 -340 5 797 1311 48 83 0 chr3R 27890292 27890460 -14593 + DNAREP1_DM LINE Penelope 413 594 0 5 797 2372 97 44 34 chr3R 27895132 27895517 -9536 - DNAREP1_DM LINE Penelope -7 587 199 5 797 1488 140 97 11 chr3R 27895494 27895974 -9079 + DNAREP1_DM LINE Penelope 123 594 0 5 797 1488 96 64 0 chr3R 27896400 27896618 -8435 + DNAREP1_DM LINE Penelope 363 594 0 5 797 935 170 0 17 chr3R 27897135 27897309 -7744 - HETRP_DM Satellite Satellite -184 1688 1518 5 797 389 156 111 0 chr3R 27897439 27897529 -7524 + DNAREP1_DM LINE Penelope 56 155 -439 5 797 376 157 112 0 chr3R 27897605 27897694 -7359 + DNAREP1_DM LINE Penelope 57 155 -439 5 797 274 105 0 0 chr3R 27897812 27897850 -7203 - HETRP_DM Satellite Satellite -167 1705 1668 5 797 287 116 0 0 chr3R 27897898 27897941 -7112 - HETRP_DM Satellite Satellite -312 1560 1518 5 797 392 156 111 0 chr3R 27898071 27898161 -6892 + DNAREP1_DM LINE Penelope 56 155 -439 5 797 376 157 112 0 chr3R 27898236 27898325 -6728 + DNAREP1_DM LINE Penelope 57 155 -439 5 797 264 132 0 0 chr3R 27898443 27898481 -6572 - HETRP_DM Satellite Satellite -167 1705 1668 5 797 803 83 116 0 chr3R 27898555 27898676 -6377 - DNAREP1_DM LINE Penelope -7 587 453 5 797 1513 52 0 23 chr3R 27898669 27898887 -6166 - HETRP_DM Satellite Satellite -1647 225 13 5 797 3321 40 20 26 chr3R 27898999 27899871 -5182 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27899983 27900855 -4198 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27900967 27901839 -3214 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27901951 27902823 -2230 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27902935 27903807 -1246 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27903919 27904791 -262 - HETRP_DM Satellite Satellite -916 867 1 5 797 880 73 100 0 chr3R 27904903 27905053 0 - HETRP_DM Satellite Satellite -916 956 792 5 585 2334 108 83 0 chr4 1 434 -1351423 + NINJA_I LTR Pao 5543 6011 0 5 585 392 206 102 68 chr4 434 611 -1351246 + NINJA_LTR LTR Pao 1 183 -134 5 585 8867 36 65 0 chr4 637 1723 -1350134 - Baggins1 LINE LOA -178 5275 4120 5 585 363 164 0 16 chr4 2098 2160 -1349697 + DMLTR5 LTR Gypsy 40 100 -166 5 585 909 321 14 9 chr4 2168 2514 -1349343 + Gypsy_I LTR Gypsy 3831 4178 -2329 5 585 1385 99 148 4 chr4 2495 2738 -1349119 - DMRT1C LINE R1 -2180 3263 2986 5 585 1026 114 0 0 chr4 2713 2862 -1348995 - DMRT1C LINE R1 -2661 2782 2634 5 585 1688 78 30 0 chr4 2923 3153 -1348704 - DMRT1C LINE R1 -2810 2633 2397 5 585 1758 38 0 0 chr4 3151 3361 -1348496 - DMRT1C LINE R1 -3246 2197 1988 5 585 2048 102 0 32 chr4 3347 3693 -1348164 - DMRT1C LINE R1 -3729 1714 1380 5 585 4105 111 30 23 chr4 3691 4348 -1347509 - DMRT1C LINE R1 -4742 701 40 5 585 3502 50 143 4 chr4 4363 4889 -1346968 - PROTOP_B DNA P -2 1151 553 5 585 2402 21 0 40 chr4 4873 5176 -1346681 + BATUMI_I LTR Pao 6994 7284 -679 5 585 49872 69 73 49 chr4 5176 12953 -1338904 + BATUMI_I LTR Pao 1 7963 0 5 585 2395 18 0 27 chr4 12953 13244 -1338613 + BATUMI_I LTR Pao 7002 7284 -679 5 585 3643 44 123 38 chr4 13240 13761 -1338096 - PROTOP_B DNA P -588 565 1 5 585 6746 198 70 1 chr4 13846 15300 -1336557 - DMRT1A LINE R1 -249 4934 3381 5 585 4161 261 121 14 chr4 15296 17183 -1334674 - DMRT1A LINE R1 -2307 2876 813 5 585 456 223 19 0 chr4 17378 17481 -1334376 - DMRT1A LINE R1 -4852 331 227 5 585 3692 118 47 12 chr4 17704 18274 -1333583 - DMRT1B LINE R1 0 5183 4594 5 585 950 178 26 31 chr4 18274 18485 -1333372 + Gypsy8_LTR LTR Gypsy 1 210 -94 5 585 1184 169 0 37 chr4 18485 18730 -1333127 + Gypsy8_I LTR Gypsy 1 236 -4111 5 585 1007 283 37 19 chr4 19294 19668 -1332189 + OSVALDO_I LTR Gypsy 408 788 -5865 5 585 2771 34 3 38 chr4 19752 20124 -1331733 + Gypsy8_I LTR Gypsy 230 588 -3759 5 585 2529 196 100 4 chr4 20124 20900 -1330957 + Gypsy8_I LTR Gypsy 708 1036 -3311 5 585 3612 147 29 46 chr4 20908 21772 -1330085 + Gypsy8_I LTR Gypsy 1035 1547 -2800 5 585 322 109 0 0 chr4 21910 21956 -1329901 + Gypsy8_I LTR Gypsy 1882 1927 -2420 5 585 2592 98 5 10 chr4 21958 22348 -1329509 + Gypsy8_I LTR Gypsy 2329 2716 -1631 5 585 896 153 26 16 chr4 22359 22573 -1329284 + Gypsy8_I LTR Gypsy 2986 3338 -1009 5 585 237 271 0 0 chr4 22615 22748 -1329109 + (CCG)n Simple_repeat Simple_repeat 3 135 0 5 585 523 56 0 53 chr4 23070 23164 -1328693 + Gypsy8_I LTR Gypsy 3331 3419 -928 5 585 509 95 0 0 chr4 23271 23345 -1328512 + Gypsy8_I LTR Gypsy 4026 4099 -248 5 585 4991 118 0 0 chr4 23344 24049 -1327808 - DMRT1B LINE R1 -973 4210 3506 5 585 26 30 0 0 chr4 24771 24804 -1327053 + AT_rich Low_complexity Low_complexity 1 33 0 5 585 910 146 357 28 chr4 25682 25984 -1325873 - DNAREP1_DM LINE Penelope -2 592 193 5 585 368 206 88 0 chr4 26019 26121 -1325736 - DNAREP1_DM LINE Penelope -483 111 1 5 585 23 33 0 0 chr4 26890 26920 -1324937 + AT_rich Low_complexity Low_complexity 1 30 0 5 585 21 57 0 0 chr4 26948 26983 -1324874 + AT_rich Low_complexity Low_complexity 1 35 0 5 585 41 58 0 0 chr4 27365 27434 -1324423 + AT_rich Low_complexity Low_complexity 1 69 0 5 585 524 81 207 0 chr4 27774 27861 -1323996 + DNAREP1_DM LINE Penelope 426 530 -64 5 585 928 143 357 28 chr4 32463 32765 -1319092 - DNAREP1_DM LINE Penelope -2 592 193 5 585 368 206 88 0 chr4 32800 32902 -1318955 - DNAREP1_DM LINE Penelope -483 111 1 5 585 24 106 0 0 chr4 33671 33765 -1318092 + AT_rich Low_complexity Low_complexity 1 94 0 5 585 41 58 0 0 chr4 34147 34216 -1317641 + AT_rich Low_complexity Low_complexity 1 69 0 5 585 611 186 45 57 chr4 34500 34710 -1317147 + DMTOM1_LTR LTR Gypsy 284 488 -19 5 585 426 100 14 28 chr4 34701 34773 -1317084 + DMTOM1_LTR LTR Gypsy 340 410 0 5 585 8991 282 66 36 chr4 34773 39869 -1311988 + DM176_I LTR Gypsy 1 4981 -1439 5 585 1115 146 0 5 chr4 39872 40065 -1311792 + DM297_I LTR Gypsy 5490 5681 -486 5 585 877 126 0 59 chr4 40064 40216 -1311641 + DM176_I LTR Gypsy 6278 6420 0 5 585 611 186 45 57 chr4 40440 40650 -1311207 + DMTOM1_LTR LTR Gypsy 284 488 -19 5 585 426 100 14 28 chr4 40641 40713 -1311144 + DMTOM1_LTR LTR Gypsy 340 410 0 5 585 524 81 207 0 chr4 40999 41086 -1310771 + DNAREP1_DM LINE Penelope 426 530 -64 5 585 8429 35 33 29 chr4 45759 46860 -1304997 - PROTOP_A DNA P 0 1105 1 5 585 746 158 375 30 chr4 46860 47145 -1304712 - DNAREP1_DM LINE Penelope -20 574 193 5 585 368 206 88 0 chr4 47180 47282 -1304575 - DNAREP1_DM LINE Penelope -483 111 1 5 585 24 106 0 0 chr4 48051 48145 -1303712 + AT_rich Low_complexity Low_complexity 1 94 0 5 585 41 58 0 0 chr4 48527 48596 -1303261 + AT_rich Low_complexity Low_complexity 1 69 0 5 585 524 81 207 0 chr4 48936 49023 -1302834 + DNAREP1_DM LINE Penelope 426 530 -64 5 585 883 149 357 28 chr4 52331 52633 -1299224 - DNAREP1_DM LINE Penelope -2 592 193 5 585 350 216 88 0 chr4 52668 52770 -1299087 - DNAREP1_DM LINE Penelope -483 111 1 5 585 24 106 0 0 chr4 53539 53633 -1298224 + AT_rich Low_complexity Low_complexity 1 94 0 5 585 41 58 0 0 chr4 54015 54084 -1297773 + AT_rich Low_complexity Low_complexity 1 69 0 5 585 6313 40 34 1 chr4 54449 55246 -1296611 + PROTOP DNA P 1 823 -3657 5 585 5950 18 1 0 chr4 55241 55919 -1295938 + PROTOP DNA P 3802 4480 0 5 585 374 99 192 27 chr4 55919 55990 -1295867 + DNAREP1_DM LINE Penelope 448 530 -64 5 585 388 219 273 0 chr4 62009 62137 -1289720 - DNAREP1_DM LINE Penelope -1 593 431 5 585 3593 61 73 12 chr4 62139 62884 -1288973 + PROTOP_B DNA P 43 939 -214 5 585 1315 114 145 22 chr4 62962 63231 -1288626 - DNAREP1_DM LINE Penelope -292 302 1 5 585 22 0 0 0 chr4 64226 64248 -1287609 + AT_rich Low_complexity Low_complexity 1 22 0 5 585 27 0 0 0 chr4 64842 64869 -1286988 + AT_rich Low_complexity Low_complexity 1 27 0 5 585 36 40 0 0 chr4 64988 65038 -1286819 + AT_rich Low_complexity Low_complexity 1 50 0 5 585 26 50 0 0 chr4 66003 66043 -1285814 + AT_rich Low_complexity Low_complexity 1 40 0 5 585 25 31 0 0 chr4 66067 66099 -1285758 + AT_rich Low_complexity Low_complexity 1 32 0 5 585 25 51 0 0 chr4 66721 66760 -1285097 + AT_rich Low_complexity Low_complexity 1 39 0 5 585 24 32 0 0 chr4 66884 66915 -1284942 + AT_rich Low_complexity Low_complexity 1 31 0 5 585 28 48 0 0 chr4 66992 67034 -1284823 + AT_rich Low_complexity Low_complexity 1 42 0 5 585 24 53 0 0 chr4 67072 67110 -1284747 + AT_rich Low_complexity Low_complexity 1 38 0 5 585 312 279 0 0 chr4 67119 67198 -1284659 - DNAREP1_DM LINE Penelope -511 83 5 5 585 1891 103 94 16 chr4 67211 67650 -1284207 - PROTOP_A DNA P 0 1105 689 5 585 2849 103 32 14 chr4 67649 68082 -1283775 - PROTOP_A DNA P -663 442 2 5 585 27 29 0 0 chr4 68146 68180 -1283677 + AT_rich Low_complexity Low_complexity 1 34 0 5 585 34 0 0 0 chr4 68306 68340 -1283517 + AT_rich Low_complexity Low_complexity 1 34 0 5 585 22 35 0 0 chr4 71336 71365 -1280492 + AT_rich Low_complexity Low_complexity 1 29 0 5 585 31 26 0 0 chr4 71894 71932 -1279925 + AT_rich Low_complexity Low_complexity 1 38 0 5 585 21 36 0 0 chr4 73017 73045 -1278812 + AT_rich Low_complexity Low_complexity 1 28 0 5 585 273 234 152 92 chr4 73172 73352 -1278505 - DNAREP1_DM LINE Penelope -106 488 298 5 585 1220 147 47 8 chr4 73352 73586 -1278271 + DNAREP1_DM LINE Penelope 1 243 -351 5 585 7368 48 33 36 chr4 73551 74622 -1277235 - PROTOP_A DNA P -38 1067 1 5 585 1272 184 124 3 chr4 74623 74978 -1276879 - DNAREP1_DM LINE Penelope -196 398 1 5 585 329 143 79 0 chr4 74985 75048 -1276809 - DNAREP1_DM LINE Penelope -353 241 174 5 585 33 56 0 0 chr4 75199 75253 -1276604 + AT_rich Low_complexity Low_complexity 1 54 0 5 585 2634 96 89 140 chr4 75419 76011 -1275846 + DNAREP1_DM LINE Penelope 2 563 -31 5 585 225 119 0 0 chr4 76042 76084 -1275773 + (TAA)n Simple_repeat Simple_repeat 1 42 0 5 585 445 120 22 0 chr4 76106 76198 -1275659 + (TTA)n Simple_repeat Simple_repeat 3 96 0 5 585 283 101 12 48 chr4 76196 76279 -1275578 + (TAA)n Simple_repeat Simple_repeat 3 82 0 5 585 217 143 35 18 chr4 76279 76336 -1275521 + (TTA)n Simple_repeat Simple_repeat 2 59 0 5 585 25 65 0 0 chr4 76680 76726 -1275131 + AT_rich Low_complexity Low_complexity 1 46 0 5 585 237 132 0 0 chr4 77328 77366 -1274491 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 585 305 320 13 0 chr4 79242 79392 -1272465 + (TA)n Simple_repeat Simple_repeat 1 152 0 5 585 215 245 19 0 chr4 79644 79697 -1272160 + (TATG)n Simple_repeat Simple_repeat 4 57 0 5 585 237 375 0 7 chr4 79833 79970 -1271887 + (TATG)n Simple_repeat Simple_repeat 1 136 0 5 585 326 331 0 0 chr4 80039 80169 -1271688 + (CATA)n Simple_repeat Simple_repeat 2 131 0 5 585 192 163 0 0 chr4 80392 80435 -1271422 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 585 35 41 0 0 chr4 80435 80484 -1271373 + AT_rich Low_complexity Low_complexity 1 49 0 5 585 29 0 0 0 chr4 80549 80578 -1271279 + AT_rich Low_complexity Low_complexity 1 29 0 5 585 250 217 16 16 chr4 80742 80803 -1271054 + (TATATG)n Simple_repeat Simple_repeat 4 64 0 5 585 202 239 22 0 chr4 81267 81313 -1270544 + (TATG)n Simple_repeat Simple_repeat 2 48 0 5 585 21 0 0 0 chr4 81658 81679 -1270178 + AT_rich Low_complexity Low_complexity 1 21 0 5 585 633 268 10 43 chr4 81685 81892 -1269965 - DNAREP1_DM LINE Penelope -37 557 358 5 585 22 0 0 0 chr4 82400 82422 -1269435 + AT_rich Low_complexity Low_complexity 1 22 0 5 585 36 0 0 0 chr4 82849 82885 -1268972 + AT_rich Low_complexity Low_complexity 1 36 0 5 585 577 196 60 47 chr4 83205 83355 -1268502 - DNAREP1_DM LINE Penelope -69 525 374 5 585 22 35 0 0 chr4 83479 83508 -1268349 + AT_rich Low_complexity Low_complexity 1 29 0 5 585 235 162 76 63 chr4 83657 83736 -1268121 - DMCR1A LINE CR1 -146 4324 4245 5 585 989 208 54 9 chr4 83783 84006 -1267851 - DMCR1A LINE CR1 -482 3988 3756 5 585 21 0 0 0 chr4 84041 84062 -1267795 + AT_rich Low_complexity Low_complexity 1 21 0 5 585 47 44 0 0 chr4 84408 84476 -1267381 + AT_rich Low_complexity Low_complexity 1 68 0 5 585 22 35 0 0 chr4 84800 84829 -1267028 + AT_rich Low_complexity Low_complexity 1 29 0 5 585 21 0 0 0 chr4 85953 85974 -1265883 + AT_rich Low_complexity Low_complexity 1 21 0 5 585 27 49 0 0 chr4 86163 86204 -1265653 + AT_rich Low_complexity Low_complexity 1 41 0 5 585 42 92 0 0 chr4 88616 88735 -1263122 + AT_rich Low_complexity Low_complexity 1 119 0 5 585 21 36 0 0 chr4 89099 89127 -1262730 + AT_rich Low_complexity Low_complexity 1 28 0 5 585 27 0 0 0 chr4 91365 91392 -1260465 + AT_rich Low_complexity Low_complexity 1 27 0 5 585 182 62 31 0 chr4 92164 92196 -1259661 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 585 23 0 0 0 chr4 92782 92805 -1259052 + AT_rich Low_complexity Low_complexity 1 23 0 5 585 25 31 0 0 chr4 92911 92943 -1258914 + AT_rich Low_complexity Low_complexity 1 32 0 5 585 274 240 13 26 chr4 93983 94060 -1257797 + (TATG)n Simple_repeat Simple_repeat 3 78 0 5 585 24 0 0 0 chr4 94703 94727 -1257130 + AT_rich Low_complexity Low_complexity 1 24 0 5 585 326 155 40 8 chr4 94742 94815 -1257042 - DNAREP1_DM LINE Penelope -104 490 437 5 585 296 164 65 16 chr4 95330 95392 -1256465 + DNAREP1_DM LINE Penelope 424 488 -106 5 585 661 230 79 55 chr4 96058 96260 -1255597 - DNAREP1_DM LINE Penelope -3 591 385 5 585 569 213 123 26 chr4 96341 96495 -1255362 + DNAREP1_DM LINE Penelope 425 593 -1 5 585 46024 2 0 0 chr4 97159 102534 -1249323 + I_DM LINE I 83 5457 -774 5 585 180 0 0 0 chr4 102534 102554 -1249303 + (TAA)n Simple_repeat Simple_repeat 3 22 0 5 585 26 0 0 0 chr4 102833 102859 -1248998 + AT_rich Low_complexity Low_complexity 1 26 0 5 585 33 25 0 0 chr4 103607 103647 -1248210 + AT_rich Low_complexity Low_complexity 1 40 0 5 585 1130 93 7 2 chr4 104223 104636 -1247221 + (TTA)n Simple_repeat Simple_repeat 1 415 0 5 585 1174 174 78 26 chr4 105084 105355 -1246502 + DNAREP1_DM LINE Penelope 202 486 -108 5 585 23 0 0 0 chr4 106454 106477 -1245380 + AT_rich Low_complexity Low_complexity 1 23 0 5 585 222 118 0 0 chr4 107005 107039 -1244818 + (CATA)n Simple_repeat Simple_repeat 3 36 0 5 585 491 173 0 9 chr4 107090 107201 -1244656 + (TA)n Simple_repeat Simple_repeat 1 110 0 5 585 36 23 0 0 chr4 107805 107848 -1244009 + AT_rich Low_complexity Low_complexity 1 43 0 5 585 24 91 0 0 chr4 108272 108338 -1243519 + AT_rich Low_complexity Low_complexity 1 66 0 5 585 37 0 0 0 chr4 109014 109051 -1242806 + AT_rich Low_complexity Low_complexity 1 37 0 5 585 29 28 0 0 chr4 109185 109221 -1242636 + AT_rich Low_complexity Low_complexity 1 36 0 5 585 505 90 7 50 chr4 109316 109456 -1242401 + (TA)n Simple_repeat Simple_repeat 1 134 0 5 585 2265 112 66 23 chr4 109522 109914 -1241943 - DNAREP1_DM LINE Penelope -185 409 1 5 585 30 27 0 0 chr4 110024 110061 -1241796 + AT_rich Low_complexity Low_complexity 1 37 0 5 585 34 55 0 0 chr4 110269 110324 -1241533 + AT_rich Low_complexity Low_complexity 1 55 0 5 585 180 77 0 0 chr4 110413 110439 -1241418 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 585 25 31 0 0 chr4 111218 111250 -1240607 + AT_rich Low_complexity Low_complexity 1 32 0 5 585 27 0 0 0 chr4 111748 111775 -1240082 + AT_rich Low_complexity Low_complexity 1 27 0 5 585 32 57 0 0 chr4 114206 114259 -1237598 + AT_rich Low_complexity Low_complexity 1 53 0 5 585 286 234 178 0 chr4 114259 114366 -1237491 - DNAREP1_DM LINE Penelope -38 556 431 5 585 23 0 0 0 chr4 115246 115269 -1236588 + AT_rich Low_complexity Low_complexity 1 23 0 5 585 54 40 0 0 chr4 116388 116463 -1235394 + AT_rich Low_complexity Low_complexity 1 75 0 5 585 22 56 0 0 chr4 116825 116861 -1234996 + AT_rich Low_complexity Low_complexity 1 36 0 5 585 25 0 0 0 chr4 117832 117857 -1234000 + AT_rich Low_complexity Low_complexity 1 25 0 5 585 1084 68 12 0 chr4 118753 118916 -1232941 + (TA)n Simple_repeat Simple_repeat 1 165 0 5 585 1199 93 15 21 chr4 118943 119274 -1232583 + (TA)n Simple_repeat Simple_repeat 1 328 0 5 585 30 0 0 0 chr4 119368 119398 -1232459 + AT_rich Low_complexity Low_complexity 1 30 0 5 585 278 159 222 0 chr4 120593 120656 -1231201 + DNAREP1_DM LINE Penelope 454 530 -64 5 585 695 169 320 4 chr4 120740 120984 -1230873 + DNAREP1_DM LINE Penelope 2 322 -272 5 585 1302 121 215 30 chr4 120975 121273 -1230584 - DNAREP1_DM LINE Penelope -241 353 1 5 585 21 0 0 0 chr4 121273 121294 -1230563 + AT_rich Low_complexity Low_complexity 1 21 0 5 585 22 70 0 0 chr4 121393 121436 -1230421 + AT_rich Low_complexity Low_complexity 1 43 0 5 585 308 172 0 17 chr4 121436 121495 -1230362 + PROTOP_B DNA P 923 980 -173 5 585 751 53 0 0 chr4 121561 121655 -1230202 + DNAREP1_DM LINE Penelope 501 594 0 5 585 1124 134 239 11 chr4 121693 122052 -1229805 - PROTOP DNA P -3984 496 55 5 585 795 130 265 23 chr4 122074 122376 -1229481 - FW_DM LINE Jockey -758 3934 3559 5 585 864 168 50 16 chr4 122409 122591 -1229266 - FW_DM LINE Jockey -1318 3374 3187 5 585 26 50 0 0 chr4 122877 122917 -1228940 + AT_rich Low_complexity Low_complexity 1 40 0 5 585 24 53 0 0 chr4 123659 123697 -1228160 + AT_rich Low_complexity Low_complexity 1 38 0 5 585 1088 115 369 17 chr4 123824 124274 -1227583 + DNAREP1_DM LINE Penelope 28 594 0 5 585 28 95 0 0 chr4 124544 124628 -1227229 + AT_rich Low_complexity Low_complexity 1 84 0 5 585 25 0 0 0 chr4 125474 125499 -1226358 + AT_rich Low_complexity Low_complexity 1 25 0 5 585 23 33 0 0 chr4 125707 125737 -1226120 + AT_rich Low_complexity Low_complexity 1 30 0 5 585 22 0 0 0 chr4 126311 126333 -1225524 + AT_rich Low_complexity Low_complexity 1 22 0 5 585 32 57 0 0 chr4 126339 126392 -1225465 + AT_rich Low_complexity Low_complexity 1 53 0 5 585 22 0 0 0 chr4 126999 127021 -1224836 + AT_rich Low_complexity Low_complexity 1 22 0 5 585 31 26 0 0 chr4 127184 127222 -1224635 + AT_rich Low_complexity Low_complexity 1 38 0 5 585 29 0 0 0 chr4 127966 127995 -1223862 + AT_rich Low_complexity Low_complexity 1 29 0 5 585 32 0 0 0 chr4 129790 129822 -1222035 + AT_rich Low_complexity Low_complexity 1 32 0 5 585 46 62 0 0 chr4 130376 130457 -1221400 + AT_rich Low_complexity Low_complexity 1 81 0 5 586 30 0 0 0 chr4 131417 131447 -1220410 + AT_rich Low_complexity Low_complexity 1 30 0 5 586 24 77 0 0 chr4 131713 131765 -1220092 + AT_rich Low_complexity Low_complexity 1 52 0 5 586 29 84 0 0 chr4 132196 132267 -1219590 + AT_rich Low_complexity Low_complexity 1 71 0 5 586 535 206 255 8 chr4 132331 132582 -1219275 - DNAREP1_DM LINE Penelope -8 586 275 5 586 37 76 0 0 chr4 132650 132729 -1219128 + AT_rich Low_complexity Low_complexity 1 79 0 5 586 315 118 203 14 chr4 132789 132858 -1218999 - DNAREP1_DM LINE Penelope -512 82 1 5 586 340 281 8 8 chr4 133512 133634 -1218223 + (TA)n Simple_repeat Simple_repeat 2 123 0 5 586 29 28 0 0 chr4 134180 134216 -1217641 + AT_rich Low_complexity Low_complexity 1 36 0 5 586 6914 21 5 10 chr4 135509 136321 -1215536 - G5_DM LINE Jockey 0 4856 4049 5 586 456 147 0 0 chr4 139593 139668 -1212189 + DNAREP1_DM LINE Penelope 1 75 -519 5 586 266 152 113 3 chr4 139684 139758 -1212099 + DNAREP1_DM LINE Penelope 260 323 -271 5 586 415 169 305 35 chr4 139772 139913 -1211944 + PROTOP_B DNA P 411 589 -564 5 586 1126 169 46 8 chr4 140210 140449 -1211408 + PROTOP_B DNA P 903 1150 -3 5 586 186 43 0 0 chr4 141455 141478 -1210379 + (TAAAA)n Simple_repeat Simple_repeat 5 27 0 5 586 31 0 0 0 chr4 142426 142457 -1209400 + AT_rich Low_complexity Low_complexity 1 31 0 5 586 21 0 0 0 chr4 142593 142614 -1209243 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 231 125 0 0 chr4 142681 142721 -1209136 + (TTA)n Simple_repeat Simple_repeat 3 42 0 5 586 3104 127 78 9 chr4 144644 145883 -1205974 + FB4_DM DNA Tc1 1134 2513 -1576 5 586 519 77 0 49 chr4 145883 145965 -1205892 + PROTOP_A DNA P 13 90 -1015 5 586 9208 38 4 1 chr4 146117 147222 -1204635 - TC1_DM DNA Tc1 0 1666 559 5 586 574 14 14 0 chr4 147221 147292 -1204565 - TC1_DM DNA Tc1 -1594 72 1 5 586 1018 177 102 43 chr4 147363 147985 -1203872 - DNAREP1_DM LINE Penelope 0 594 42 5 586 29 60 0 0 chr4 148423 148473 -1203384 + AT_rich Low_complexity Low_complexity 1 50 0 5 586 581 131 50 0 chr4 148609 148708 -1203149 + DNAREP1_DM LINE Penelope 2 105 -489 5 586 373 78 0 0 chr4 148711 148762 -1203095 + S2_DM DNA Tc1 1 51 -1684 5 586 756 53 0 0 chr4 148761 148856 -1203001 - S2_DM DNA Tc1 -166 1569 1475 5 586 1248 104 0 15 chr4 148869 149065 -1202792 - S2_DM DNA Tc1 -1143 592 400 5 586 2073 126 57 18 chr4 149065 149453 -1202404 + DNAREP1_DM LINE Penelope 164 566 -28 5 586 323 190 94 12 chr4 149590 149675 -1202182 + DNAREP1_DM LINE Penelope 406 497 -97 5 586 670 231 71 36 chr4 151210 151434 -1200423 + DNAREP1_DM LINE Penelope 1 232 -362 5 586 845 199 36 16 chr4 151404 151733 -1200124 + DNAREP1_DM LINE Penelope 83 327 -267 5 586 1287 108 49 57 chr4 151718 151963 -1199894 + DNAREP1_DM LINE Penelope 189 431 -163 5 586 427 33 0 32 chr4 152219 152282 -1199575 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 586 38 68 0 0 chr4 153544 153617 -1198240 + AT_rich Low_complexity Low_complexity 1 73 0 5 586 22 0 0 0 chr4 153766 153788 -1198069 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 45 0 0 0 chr4 154032 154077 -1197780 + AT_rich Low_complexity Low_complexity 1 45 0 5 586 30 27 0 0 chr4 155867 155904 -1195953 + AT_rich Low_complexity Low_complexity 1 37 0 5 586 738 100 0 9 chr4 156218 156329 -1195528 - DNAREP1_DM LINE Penelope -2 592 483 5 586 28 0 0 0 chr4 158960 158988 -1192869 + AT_rich Low_complexity Low_complexity 1 28 0 5 586 218 197 0 16 chr4 159321 159361 -1192496 + (TTA)n Simple_repeat Simple_repeat 3 41 0 5 586 335 22 112 0 chr4 159361 159450 -1192407 + (TA)n Simple_repeat Simple_repeat 2 100 0 5 586 218 197 0 16 chr4 159450 159471 -1192386 + (TTA)n Simple_repeat Simple_repeat 3 23 0 5 586 419 196 118 0 chr4 159496 159596 -1192261 - DNAREP1_DM LINE Penelope -35 559 448 5 586 1214 124 94 39 chr4 159596 159830 -1192027 + PROTOP DNA P 1 247 -4233 5 586 864 123 0 109 chr4 159821 160004 -1191853 + PROTOP_A DNA P 335 497 -608 5 586 1862 99 105 0 chr4 160020 160314 -1191543 - DNAREP1_DM LINE Penelope 0 594 270 5 586 1033 148 151 13 chr4 160328 160560 -1191297 + PROTOP_A DNA P 823 1092 -13 5 586 22 35 0 0 chr4 160571 160600 -1191257 + AT_rich Low_complexity Low_complexity 1 29 0 5 586 336 292 155 0 chr4 160635 160796 -1191061 - DNAREP1_DM LINE Penelope -34 560 375 5 586 262 119 0 0 chr4 163828 163870 -1187987 - DNAREP1_DM LINE Penelope -7 587 546 5 586 586 174 36 14 chr4 163890 164030 -1187827 - DNAREP1_DM LINE Penelope -282 312 170 5 586 1933 82 53 14 chr4 164031 164316 -1187541 - DNAREP1_DM LINE Penelope -28 566 271 5 586 10556 83 64 0 chr4 164375 165959 -1185898 + I_DM LINE I 2134 3819 -2412 5 586 749 155 0 49 chr4 166521 166684 -1185173 - Gypsy8_I LTR Gypsy -4121 226 72 5 586 301 213 27 0 chr4 166795 166870 -1184987 - Gypsy8_I LTR Gypsy -4268 79 3 5 586 987 174 0 78 chr4 166870 167093 -1184764 - Gypsy8_LTR LTR Gypsy -100 204 1 5 586 9128 85 53 16 chr4 167120 168558 -1183299 + I_DM LINE I 3974 5464 -767 5 586 34 55 0 0 chr4 169621 169676 -1182181 + AT_rich Low_complexity Low_complexity 1 55 0 5 586 2904 88 79 33 chr4 169778 170260 -1181597 + DNAREP1_DM LINE Penelope 91 594 0 5 586 1001 197 156 9 chr4 170266 170602 -1181255 + DNAREP1_DM LINE Penelope 20 404 -190 5 586 29 47 0 0 chr4 170604 170647 -1181210 + AT_rich Low_complexity Low_complexity 1 43 0 5 586 43 76 0 0 chr4 174034 174126 -1177731 + AT_rich Low_complexity Low_complexity 1 92 0 5 586 23 0 0 0 chr4 174308 174331 -1177526 + AT_rich Low_complexity Low_complexity 1 23 0 5 586 234 0 0 0 chr4 175921 175947 -1175910 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 586 402 167 33 22 chr4 176179 176271 -1175586 + Transib-N1_DM DNA Transib 20 112 -402 5 586 21 0 0 0 chr4 177002 177023 -1174834 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 23 0 0 0 chr4 177149 177172 -1174685 + AT_rich Low_complexity Low_complexity 1 23 0 5 586 21 36 0 0 chr4 178001 178029 -1173828 + AT_rich Low_complexity Low_complexity 1 28 0 5 586 405 223 0 10 chr4 178426 178530 -1173327 - DNAREP1_DM LINE Penelope -423 171 69 5 586 27 73 0 0 chr4 181088 181143 -1170714 + AT_rich Low_complexity Low_complexity 1 55 0 5 586 2574 91 70 0 chr4 185891 186288 -1165569 + DNAREP1_DM LINE Penelope 1 425 -169 5 586 22 0 0 0 chr4 187293 187315 -1164542 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 34 42 0 0 chr4 194567 194615 -1157242 + AT_rich Low_complexity Low_complexity 1 48 0 5 586 27 0 0 0 chr4 194668 194695 -1157162 + AT_rich Low_complexity Low_complexity 1 27 0 5 586 32 26 0 0 chr4 194797 194836 -1157021 + AT_rich Low_complexity Low_complexity 1 39 0 5 586 23 54 0 0 chr4 195894 195931 -1155926 + AT_rich Low_complexity Low_complexity 1 37 0 5 586 41 36 0 0 chr4 196437 196492 -1155365 + AT_rich Low_complexity Low_complexity 1 55 0 5 586 35 63 0 0 chr4 197362 197425 -1154432 + AT_rich Low_complexity Low_complexity 1 63 0 5 586 21 0 0 0 chr4 197983 198004 -1153853 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 183 49 73 0 chr4 198672 198713 -1153144 + (TTA)n Simple_repeat Simple_repeat 1 44 0 5 586 21 0 0 0 chr4 200597 200618 -1151239 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 2323 97 34 0 chr4 200859 201208 -1150649 - DNAREP1_DM LINE Penelope 0 594 234 5 586 279 210 320 26 chr4 201213 201362 -1150495 - DNAREP1_DM LINE Penelope -262 332 140 5 586 786 148 141 16 chr4 201379 201564 -1150293 - DNAREP1_DM LINE Penelope -384 210 3 5 586 752 177 155 10 chr4 201552 201746 -1150111 + PROTOP DNA P 139 361 -4119 5 586 45 34 0 0 chr4 201998 202057 -1149800 + AT_rich Low_complexity Low_complexity 1 59 0 5 586 21 0 0 0 chr4 202143 202164 -1149693 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 296 164 27 0 chr4 202597 202670 -1149187 + PROTOP DNA P 355 429 -4051 5 586 250 164 30 90 chr4 202689 202823 -1149034 + PROTOP DNA P 549 675 -3805 5 586 229 218 284 10 chr4 202846 202948 -1148909 + PROTOP DNA P 1469 1598 -2882 5 586 705 209 82 5 chr4 202966 203230 -1148627 + PROTOP DNA P 4136 4366 -114 5 586 5972 84 108 81 chr4 203230 204353 -1147504 - PROTOP_B DNA P 0 1153 1 5 586 434 226 17 25 chr4 204353 204471 -1147386 + PROTOP DNA P 4356 4475 -5 5 586 56 71 0 0 chr4 204894 205006 -1146851 + AT_rich Low_complexity Low_complexity 1 112 0 5 586 1908 129 172 43 chr4 205586 206112 -1145745 + DNAREP1_DM LINE Penelope 1 594 0 5 586 292 262 50 0 chr4 206248 206328 -1145529 + DNAREP1_DM LINE Penelope 382 465 -129 5 586 2200 113 46 61 chr4 207844 208238 -1143619 - DNAREP1_DM LINE Penelope -31 563 176 5 586 37 0 0 0 chr4 208354 208391 -1143466 + AT_rich Low_complexity Low_complexity 1 37 0 5 586 23 0 0 0 chr4 209012 209035 -1142822 + AT_rich Low_complexity Low_complexity 1 23 0 5 586 33 0 0 0 chr4 209877 209910 -1141947 + AT_rich Low_complexity Low_complexity 1 33 0 5 586 33 43 0 0 chr4 210356 210403 -1141454 + AT_rich Low_complexity Low_complexity 1 47 0 5 586 1047 172 82 46 chr4 211507 211788 -1140069 - DNAREP1_DM LINE Penelope -303 291 1 5 586 656 95 0 0 chr4 212118 212213 -1139644 - DNAREP1_DM LINE Penelope 0 594 500 5 586 1018 99 0 7 chr4 212217 212370 -1139487 - DNAREP1_DM LINE Penelope -439 155 4 5 586 29 28 0 0 chr4 212445 212481 -1139376 + AT_rich Low_complexity Low_complexity 1 36 0 5 586 22 35 0 0 chr4 212538 212567 -1139290 + AT_rich Low_complexity Low_complexity 1 29 0 5 586 992 150 95 17 chr4 213261 213492 -1138365 + DNAREP1_DM LINE Penelope 2 250 -344 5 586 238 169 88 44 chr4 213463 213531 -1138326 + DNAREP1_DM LINE Penelope 117 187 -407 5 586 653 118 59 0 chr4 213541 213643 -1138214 + DNAREP1_DM LINE Penelope 363 470 -124 5 586 236 237 17 0 chr4 213789 213848 -1138009 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 586 24 0 0 0 chr4 215050 215074 -1136783 + AT_rich Low_complexity Low_complexity 1 24 0 5 586 233 293 0 0 chr4 216383 216465 -1135392 + DNAREP1_DM LINE Penelope 507 588 -6 5 586 1766 142 47 16 chr4 216509 217047 -1134810 - DNAREP1_DM LINE Penelope 0 594 2 5 586 23 0 0 0 chr4 217822 217845 -1134012 + AT_rich Low_complexity Low_complexity 1 23 0 5 586 24 77 0 0 chr4 217919 217971 -1133886 + AT_rich Low_complexity Low_complexity 1 52 0 5 586 27 0 0 0 chr4 218252 218279 -1133578 + AT_rich Low_complexity Low_complexity 1 27 0 5 586 1233 87 83 39 chr4 222458 222662 -1129195 + DNAREP1_DM LINE Penelope 362 574 -20 5 586 5774 58 68 6 chr4 222662 223505 -1128352 - PROTOP_B DNA P 0 1153 259 5 586 27 29 0 0 chr4 225452 225486 -1126371 + AT_rich Low_complexity Low_complexity 1 34 0 5 586 299 261 14 78 chr4 225516 225657 -1126200 + DNAREP1_DM LINE Penelope 361 492 -102 5 586 30 0 0 0 chr4 225850 225880 -1125977 + AT_rich Low_complexity Low_complexity 1 30 0 5 586 22 0 0 0 chr4 226256 226278 -1125579 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 472 69 276 0 chr4 227117 227204 -1124653 - DMCR1A LINE CR1 -1 4469 4359 5 586 1197 69 0 0 chr4 227229 227389 -1124468 - G4_DM LINE Jockey -2043 1813 1654 5 586 375 84 56 0 chr4 227398 227469 -1124388 - DOC5_DM LINE Jockey 0 4682 4608 5 586 5495 55 51 1 chr4 227466 228192 -1123665 - DMCR1A LINE CR1 -2070 2400 1639 5 586 401 41 0 0 chr4 228192 228241 -1123616 - PROTOP_B DNA P 0 1153 1105 5 586 9394 17 4 3 chr4 228241 229345 -1122512 + PROTOP_A DNA P 1 1105 0 5 586 3900 47 87 25 chr4 229345 229930 -1121927 - PROTOP_B DNA P -42 1111 491 5 586 3287 67 125 30 chr4 229931 230572 -1121285 - DMCR1A LINE CR1 -2917 1553 852 5 586 25 31 0 0 chr4 231370 231402 -1120455 + AT_rich Low_complexity Low_complexity 1 32 0 5 586 339 93 19 0 chr4 231695 231749 -1120108 - DNAREP1_DM LINE Penelope -496 98 44 5 586 24 53 0 0 chr4 233373 233411 -1118446 + AT_rich Low_complexity Low_complexity 1 38 0 5 586 21 57 0 0 chr4 233737 233772 -1118085 + AT_rich Low_complexity Low_complexity 1 35 0 5 586 639 78 0 53 chr4 233922 234017 -1117840 - DNAREP1_DM LINE Penelope 0 594 505 5 586 1186 215 156 0 chr4 234010 234338 -1117519 + FW3_DM LINE Jockey 609 987 -2145 5 586 2169 128 60 52 chr4 234537 235087 -1116770 + DNAREP1_DM LINE Penelope 86 594 0 5 586 257 194 149 0 chr4 235101 235168 -1116689 - DNAREP1_DM LINE Penelope -390 204 128 5 586 26 50 0 0 chr4 235575 235615 -1116242 + AT_rich Low_complexity Low_complexity 1 40 0 5 586 21 0 0 0 chr4 235716 235737 -1116120 + AT_rich Low_complexity Low_complexity 1 21 0 5 586 30 27 0 0 chr4 236468 236505 -1115352 + AT_rich Low_complexity Low_complexity 1 37 0 5 586 655 203 7 21 chr4 237071 237212 -1114645 + Gypsy12A_LTR LTR Gypsy 2142 2280 0 5 586 587 145 215 27 chr4 238272 238421 -1113436 + DNAREP1_DM LINE Penelope 418 594 0 5 586 250 208 153 20 chr4 238495 238593 -1113264 + DNAREP1_DM LINE Penelope 424 534 -60 5 586 1979 195 69 20 chr4 239774 240223 -1111634 - FW_DM LINE Jockey -249 4443 3973 5 586 857 112 222 11 chr4 240222 240411 -1111446 - DNAREP1_DM LINE Penelope -174 420 192 5 586 2654 62 21 24 chr4 242050 242429 -1109428 + TC1-2_DM DNA Tc1 1 378 -1266 5 586 5493 42 11 6 chr4 242431 243134 -1108723 + TC1-2_DM DNA Tc1 938 1644 0 5 586 447 182 118 22 chr4 243897 244032 -1107825 - DNAREP1_DM LINE Penelope -279 315 168 5 586 23 0 0 0 chr4 244067 244090 -1107767 + AT_rich Low_complexity Low_complexity 1 23 0 5 586 361 11 235 0 chr4 245303 246223 -1105634 + (CTTAA)n Simple_repeat Simple_repeat 1 1136 0 5 586 22 0 0 0 chr4 246485 246507 -1105350 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 229 229 0 54 chr4 246713 246787 -1105070 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 5 586 3523 128 78 39 chr4 246943 247612 -1104245 - S_DM DNA Tc1 -1041 695 1 5 586 35 24 0 0 chr4 247720 247762 -1104095 + AT_rich Low_complexity Low_complexity 1 42 0 5 586 266 203 15 30 chr4 247832 247898 -1103959 + DNAREP1_DM LINE Penelope 459 523 -71 5 586 208 147 0 0 chr4 247904 247938 -1103919 + (TA)n Simple_repeat Simple_repeat 1 34 0 5 586 32 43 0 0 chr4 248072 248118 -1103739 + AT_rich Low_complexity Low_complexity 1 46 0 5 586 405 129 0 0 chr4 249061 249123 -1102734 + DNAREP1_DM LINE Penelope 18 79 -515 5 586 400 149 0 0 chr4 249259 249326 -1102531 + DNAREP1_DM LINE Penelope 12 78 -516 5 586 561 190 43 0 chr4 249325 249441 -1102416 + DNAREP1_DM LINE Penelope 429 549 -45 5 586 26 0 0 0 chr4 249501 249527 -1102330 + AT_rich Low_complexity Low_complexity 1 26 0 5 586 271 220 71 35 chr4 250412 250497 -1101360 + DNAREP1_DM LINE Penelope 507 594 0 5 586 366 263 118 7 chr4 251265 251418 -1100439 + DNAREP1_DM LINE Penelope 388 557 -37 5 586 32 0 0 0 chr4 252617 252649 -1099208 + AT_rich Low_complexity Low_complexity 1 32 0 5 586 26 50 0 0 chr4 252757 252797 -1099060 + AT_rich Low_complexity Low_complexity 1 40 0 5 586 226 363 52 0 chr4 253825 254018 -1097839 - DNAREP1_DM LINE Penelope -117 477 275 5 586 1222 102 96 0 chr4 254028 254225 -1097632 - DNAREP1_DM LINE Penelope -4 590 375 5 586 1182 166 13 13 chr4 254224 254456 -1097401 - DNAREP1_DM LINE Penelope -362 232 1 5 586 23 33 0 0 chr4 254715 254745 -1097112 + AT_rich Low_complexity Low_complexity 1 30 0 5 586 927 188 202 60 chr4 255090 255441 -1096416 + DNAREP1_DM LINE Penelope 161 561 -33 5 586 22 70 0 0 chr4 255773 255816 -1096041 + AT_rich Low_complexity Low_complexity 1 43 0 5 586 2095 147 70 58 chr4 255866 256558 -1095299 - DNAREP1_DM LINE Penelope -19 575 1 5 586 22 0 0 0 chr4 256868 256890 -1094967 + AT_rich Low_complexity Low_complexity 1 22 0 5 586 21 36 0 0 chr4 261850 261878 -1089979 + AT_rich Low_complexity Low_complexity 1 28 0 5 587 27 49 0 0 chr4 262262 262303 -1089554 + AT_rich Low_complexity Low_complexity 1 41 0 5 587 21 57 0 0 chr4 262662 262697 -1089160 + AT_rich Low_complexity Low_complexity 1 35 0 5 587 231 146 0 0 chr4 263691 263732 -1088125 + (CCG)n Simple_repeat Simple_repeat 2 42 0 5 587 25 31 0 0 chr4 264391 264423 -1087434 + AT_rich Low_complexity Low_complexity 1 32 0 5 587 269 175 94 16 chr4 264457 264521 -1087336 + DNAREP1_DM LINE Penelope 503 571 -23 5 587 22 0 0 0 chr4 266841 266863 -1084994 + AT_rich Low_complexity Low_complexity 1 22 0 5 587 27 62 0 0 chr4 267857 267905 -1083952 + AT_rich Low_complexity Low_complexity 1 48 0 5 587 5610 47 9 1 chr4 268096 268796 -1083061 - DMCR1A LINE CR1 -2127 2343 1639 5 587 1743 46 5 14 chr4 268796 269018 -1082839 - PROTOP_B DNA P 0 1153 934 5 587 2525 54 0 0 chr4 269031 269345 -1082512 - DMCR1A LINE CR1 -3202 1268 955 5 587 1209 48 0 29 chr4 269347 269517 -1082340 - DMCR1A LINE CR1 -4305 165 1 5 587 693 110 126 0 chr4 269938 270065 -1081792 + DNAREP1_DM LINE Penelope 191 333 -261 5 587 23 54 0 0 chr4 270372 270409 -1081448 + AT_rich Low_complexity Low_complexity 1 37 0 5 587 729 157 426 6 chr4 271012 271344 -1080513 + DNAREP1_DM LINE Penelope 73 543 -51 5 587 24 77 0 0 chr4 271887 271939 -1079918 + AT_rich Low_complexity Low_complexity 1 52 0 5 587 21 57 0 0 chr4 272154 272189 -1079668 + AT_rich Low_complexity Low_complexity 1 35 0 5 587 23 54 0 0 chr4 274087 274124 -1077733 + AT_rich Low_complexity Low_complexity 1 37 0 5 587 1528 96 219 61 chr4 274427 274937 -1076920 - DNAREP1_DM LINE Penelope -3 591 1 5 587 22 35 0 0 chr4 275692 275721 -1076136 + AT_rich Low_complexity Low_complexity 1 29 0 5 587 378 216 11 0 chr4 280254 280342 -1071515 - DNAREP1_DM LINE Penelope 0 594 506 5 587 435 131 12 12 chr4 280390 280475 -1071382 - DNAREP1_DM LINE Penelope -259 335 251 5 587 27 29 0 0 chr4 280512 280546 -1071311 + AT_rich Low_complexity Low_complexity 1 34 0 5 587 374 246 49 61 chr4 281195 281440 -1070417 + DNAREP1_DM LINE Penelope 165 331 -263 5 587 464 191 11 0 chr4 281568 281662 -1070195 - DNAREP1_DM LINE Penelope -481 113 19 5 587 26 50 0 0 chr4 282794 282834 -1069023 + AT_rich Low_complexity Low_complexity 1 40 0 5 587 23 0 0 0 chr4 282979 283002 -1068855 + AT_rich Low_complexity Low_complexity 1 23 0 5 587 27 0 0 0 chr4 283522 283549 -1068308 + AT_rich Low_complexity Low_complexity 1 27 0 5 587 468 218 121 0 chr4 284567 284691 -1067166 - DNAREP1_DM LINE Penelope -155 439 301 5 587 361 162 302 9 chr4 284705 284811 -1067046 + DNAREP1_DM LINE Penelope 343 479 -115 5 587 206 61 100 20 chr4 284872 284922 -1066935 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 5 587 30 89 0 0 chr4 285073 285152 -1066705 + AT_rich Low_complexity Low_complexity 1 79 0 5 587 28 61 0 0 chr4 285599 285648 -1066209 + AT_rich Low_complexity Low_complexity 1 49 0 5 587 38 96 0 0 chr4 286257 286372 -1065485 + AT_rich Low_complexity Low_complexity 1 115 0 5 587 1965 97 193 3 chr4 286380 286742 -1065115 + DNAREP1_DM LINE Penelope 1 431 -163 5 587 644 142 383 11 chr4 287151 287332 -1064525 + DMCR1A LINE CR1 3263 3511 -959 5 587 2115 127 55 48 chr4 287327 287748 -1064109 + DMCR1A LINE CR1 4047 4470 0 5 587 753 140 42 54 chr4 287752 287918 -1063939 + DNAREP1_DM LINE Penelope 395 558 -36 5 587 22 0 0 0 chr4 288887 288909 -1062948 + AT_rich Low_complexity Low_complexity 1 22 0 5 587 28 0 0 0 chr4 289679 289707 -1062150 + AT_rich Low_complexity Low_complexity 1 28 0 5 587 29 0 0 0 chr4 289781 289810 -1062047 + AT_rich Low_complexity Low_complexity 1 29 0 5 587 839 232 104 19 chr4 290525 290793 -1061064 + DNAREP1_DM LINE Penelope 304 594 0 5 587 347 100 0 0 chr4 293489 293539 -1058318 + DNAREP1_DM LINE Penelope 511 560 -34 5 587 30 27 0 0 chr4 294883 294920 -1056937 + AT_rich Low_complexity Low_complexity 1 37 0 5 587 22 88 0 0 chr4 295323 295380 -1056477 + AT_rich Low_complexity Low_complexity 1 57 0 5 587 26 0 0 0 chr4 296391 296417 -1055440 + AT_rich Low_complexity Low_complexity 1 26 0 5 587 26 50 0 0 chr4 297377 297417 -1054440 + AT_rich Low_complexity Low_complexity 1 40 0 5 587 311 152 390 0 chr4 297652 297757 -1054100 + DNAREP1_DM LINE Penelope 85 230 -364 5 587 548 222 216 0 chr4 297786 297953 -1053904 + DNAREP1_DM LINE Penelope 366 568 -26 5 587 23 0 0 0 chr4 298796 298819 -1053038 + AT_rich Low_complexity Low_complexity 1 23 0 5 587 26 0 0 0 chr4 299331 299357 -1052500 + AT_rich Low_complexity Low_complexity 1 26 0 5 587 22 0 0 0 chr4 299676 299698 -1052159 + AT_rich Low_complexity Low_complexity 1 22 0 5 587 24 67 0 0 chr4 299765 299810 -1052047 + AT_rich Low_complexity Low_complexity 1 45 0 5 587 26 50 0 0 chr4 299954 299994 -1051863 + AT_rich Low_complexity Low_complexity 1 40 0 5 587 263 56 74 0 chr4 300439 300493 -1051364 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 587 21 36 0 0 chr4 300878 300906 -1050951 + AT_rich Low_complexity Low_complexity 1 28 0 5 587 26 0 0 0 chr4 301580 301606 -1050251 + AT_rich Low_complexity Low_complexity 1 26 0 5 587 36 23 0 0 chr4 301849 301892 -1049965 + AT_rich Low_complexity Low_complexity 1 43 0 5 587 261 135 128 139 chr4 302120 302206 -1049651 + DNAREP1_DM LINE Penelope 363 447 -147 5 587 38 39 0 0 chr4 302887 302939 -1048918 + AT_rich Low_complexity Low_complexity 1 52 0 5 587 3273 31 0 0 chr4 303403 303789 -1048068 - ROOA_LTR LTR Pao 0 386 1 5 587 34524 25 94 2 chr4 303790 308159 -1043698 - ROOA_I LTR Pao 0 6849 2076 5 587 9623 21 18 6 chr4 308160 309317 -1042540 - ROOA_I LTR Pao -4880 1969 799 5 587 3795 24 24 0 chr4 309312 309769 -1042088 - ROOA_I LTR Pao -6381 468 1 5 587 3341 21 0 0 chr4 309769 310155 -1041702 - ROOA_LTR LTR Pao 0 386 1 5 587 42 20 0 0 chr4 310691 310740 -1041117 + AT_rich Low_complexity Low_complexity 1 49 0 5 587 1387 62 0 0 chr4 310756 310933 -1040924 - DMCR1A LINE CR1 -354 4116 3940 5 587 1250 65 6 0 chr4 310933 311101 -1040756 - DMCR1A LINE CR1 -1161 3309 3141 5 587 2570 54 0 0 chr4 311102 311417 -1040440 - DMCR1A LINE CR1 -1499 2971 2657 5 587 31 26 0 0 chr4 311730 311768 -1040089 + AT_rich Low_complexity Low_complexity 1 38 0 5 587 210 91 0 0 chr4 311771 311804 -1040053 + (TTTCG)n Simple_repeat Simple_repeat 2 34 0 5 587 26 74 0 0 chr4 311876 311930 -1039927 + AT_rich Low_complexity Low_complexity 1 54 0 5 587 31 0 0 0 chr4 312033 312064 -1039793 + AT_rich Low_complexity Low_complexity 1 31 0 5 587 25 51 0 0 chr4 312351 312390 -1039467 + AT_rich Low_complexity Low_complexity 1 39 0 5 587 1794 153 240 52 chr4 312427 312923 -1038934 - DNAREP1_DM LINE Penelope 0 594 6 5 587 297 197 91 0 chr4 313037 313103 -1038754 + DNAREP1_DM LINE Penelope 292 363 -231 5 587 278 360 37 15 chr4 313903 314230 -1037627 + BURDOCK_I LTR Gypsy 632 965 -4895 5 587 9180 17 19 0 chr4 315270 316354 -1035503 - PROTOP_A DNA P 0 1105 1 5 587 806 341 23 22 chr4 316452 316784 -1035073 + Gypsy_DS LTR Gypsy 2995 3653 -2876 5 587 1232 113 19 0 chr4 316784 316997 -1034860 + TLD2 Unknown Unknown 2 218 0 5 587 806 341 23 22 chr4 316997 317172 -1034685 + Gypsy_DS LTR Gypsy 3654 4004 -2525 5 587 599 338 16 6 chr4 317233 317552 -1034305 + Gypsy4_I LTR Gypsy 3119 3440 -2848 5 587 2329 48 65 0 chr4 317717 318340 -1033517 + TRANSIB3 DNA Transib 13 722 -2161 5 587 3548 21 7 0 chr4 318363 318788 -1033069 - TC1_DM DNA Tc1 -1238 428 1 5 587 4755 42 22 2 chr4 318788 319378 -1032479 + TRANSIB3 DNA Transib 705 1306 -1577 5 587 3604 42 27 2 chr4 319386 319867 -1031990 + TRANSIB3 DNA Transib 2391 2883 0 5 587 21 0 0 0 chr4 319989 320010 -1031847 + AT_rich Low_complexity Low_complexity 1 21 0 5 587 228 35 0 0 chr4 320133 320162 -1031695 + (TTA)n Simple_repeat Simple_repeat 3 31 0 5 587 26 0 0 0 chr4 320877 320903 -1030954 + AT_rich Low_complexity Low_complexity 1 26 0 5 587 24 85 0 0 chr4 321557 321616 -1030241 + AT_rich Low_complexity Low_complexity 1 59 0 5 587 9268 22 6 0 chr4 323299 324397 -1027460 + PROTOP_A DNA P 1 1105 0 5 587 270 214 0 0 chr4 324549 324605 -1027252 - DNAREP1_DM LINE Penelope -111 483 428 5 587 461 229 0 0 chr4 324744 324840 -1027017 - DNAREP1_DM LINE Penelope -176 418 323 5 587 925 221 74 58 chr4 324869 325234 -1026623 + DNAREP1_DM LINE Penelope 224 594 0 5 587 29 0 0 0 chr4 325387 325416 -1026441 + AT_rich Low_complexity Low_complexity 1 29 0 5 587 422 0 0 0 chr4 327210 327257 -1024600 - PROTOP_B DNA P 0 1153 1107 5 587 9343 20 5 4 chr4 327259 328362 -1023495 + PROTOP_A DNA P 1 1105 0 5 587 33 0 0 0 chr4 330123 330156 -1021701 + AT_rich Low_complexity Low_complexity 1 33 0 5 587 313 91 0 0 chr4 331488 331532 -1020325 + DNAREP1_DM LINE Penelope 12 55 -539 5 587 30 0 0 0 chr4 331541 331571 -1020286 + AT_rich Low_complexity Low_complexity 1 30 0 5 587 25 51 0 0 chr4 332987 333026 -1018831 + AT_rich Low_complexity Low_complexity 1 39 0 5 587 761 50 35 14 chr4 334844 334986 -1016871 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 5 587 27 49 0 0 chr4 335214 335255 -1016602 + AT_rich Low_complexity Low_complexity 1 41 0 5 587 23 33 0 0 chr4 335368 335398 -1016459 + AT_rich Low_complexity Low_complexity 1 30 0 5 587 209 111 21 43 chr4 337601 337648 -1014209 + A-rich Low_complexity Low_complexity 5 50 0 5 587 599 229 98 85 chr4 338099 338404 -1013453 + DNAREP1_DM LINE Penelope 249 557 -37 5 587 22 0 0 0 chr4 338730 338752 -1013105 + AT_rich Low_complexity Low_complexity 1 22 0 5 587 7596 42 68 26 chr4 338844 339919 -1011938 - PROTOP_B DNA P 0 1153 34 5 587 23 0 0 0 chr4 339984 340007 -1011850 + AT_rich Low_complexity Low_complexity 1 23 0 5 587 32 75 0 0 chr4 340498 340565 -1011292 + AT_rich Low_complexity Low_complexity 1 67 0 5 587 3724 0 0 21 chr4 340669 341102 -1010755 + Stalker2_LTR LTR Gypsy 1 424 0 5 587 9817 4 12 0 chr4 341102 342236 -1009621 + Stalker2_I LTR Gypsy 1 1148 -6254 5 587 3852 9 7 0 chr4 342461 342919 -1008938 + Stalker2_I LTR Gypsy 1132 1592 -5810 5 587 40064 18 6 2 chr4 343118 348355 -1003502 + Stalker2_I LTR Gypsy 1574 6530 0 5 587 3724 0 0 21 chr4 348355 348788 -1003069 + Stalker2_LTR LTR Gypsy 1 424 0 5 587 22 35 0 0 chr4 351361 351390 -1000467 + AT_rich Low_complexity Low_complexity 1 29 0 5 587 32 0 0 0 chr4 351528 351560 -1000297 + AT_rich Low_complexity Low_complexity 1 32 0 5 587 1543 124 248 8 chr4 352971 353450 -998407 + DNAREP1_DM LINE Penelope 1 594 0 5 587 21 0 0 0 chr4 353533 353554 -998303 + AT_rich Low_complexity Low_complexity 1 21 0 5 587 22 0 0 0 chr4 353628 353650 -998207 + AT_rich Low_complexity Low_complexity 1 22 0 5 587 934 129 156 25 chr4 353908 354107 -997750 + DNAREP1_DM LINE Penelope 246 470 -124 5 587 24 53 0 0 chr4 354927 354965 -996892 + AT_rich Low_complexity Low_complexity 1 38 0 5 587 23 0 0 0 chr4 355243 355266 -996591 + AT_rich Low_complexity Low_complexity 1 23 0 5 587 22 56 0 0 chr4 355351 355387 -996470 + AT_rich Low_complexity Low_complexity 1 36 0 5 587 26 0 0 0 chr4 356870 356896 -994961 + AT_rich Low_complexity Low_complexity 1 26 0 5 587 33 25 0 0 chr4 358048 358088 -993769 + AT_rich Low_complexity Low_complexity 1 40 0 5 587 30 77 0 0 chr4 358271 358336 -993521 + AT_rich Low_complexity Low_complexity 1 65 0 5 587 26 88 0 0 chr4 359027 359095 -992762 + AT_rich Low_complexity Low_complexity 1 68 0 5 587 23 68 0 0 chr4 359325 359369 -992488 + AT_rich Low_complexity Low_complexity 1 44 0 5 587 462 198 133 16 chr4 359622 359750 -992107 + DNAREP1_DM LINE Penelope 344 486 -108 5 587 27 81 0 0 chr4 360492 360554 -991303 + AT_rich Low_complexity Low_complexity 1 62 0 5 587 557 242 248 7 chr4 360913 361208 -990649 - DNAREP1_DM LINE Penelope -15 579 214 5 587 364 132 200 24 chr4 361701 361786 -990071 + DNAREP1_DM LINE Penelope 428 527 -67 5 587 759 83 0 0 chr4 362052 362173 -989684 + (TA)n Simple_repeat Simple_repeat 1 121 0 5 587 454 158 37 15 chr4 362961 363298 -988559 + (TA)n Simple_repeat Simple_repeat 1 344 0 5 587 215 31 0 30 chr4 363298 363331 -988526 + (TTATA)n Simple_repeat Simple_repeat 2 33 0 5 587 29 98 0 0 chr4 363331 363423 -988434 + AT_rich Low_complexity Low_complexity 1 92 0 5 587 26 0 0 0 chr4 363699 363725 -988132 + AT_rich Low_complexity Low_complexity 1 26 0 5 587 344 87 0 0 chr4 363760 363806 -988051 + DNAREP1_DM LINE Penelope 1 46 -548 5 587 319 242 40 10 chr4 363827 363927 -987930 + DNAREP1_DM LINE Penelope 145 247 -347 5 587 620 107 143 0 chr4 364207 364319 -987538 - DNAREP1_DM LINE Penelope 0 594 467 5 587 235 88 0 0 chr4 364471 364505 -987352 + DNAREP1_DM LINE Penelope 496 529 -65 5 587 3177 19 0 0 chr4 364680 365045 -986812 + ROOA_LTR LTR Pao 22 386 0 5 587 3911 19 13 0 chr4 365045 365507 -986350 + ROOA_I LTR Pao 1 468 -6381 5 587 9623 21 18 6 chr4 365502 366659 -985198 + ROOA_I LTR Pao 799 1969 -4880 5 587 2439 23 56 0 chr4 366660 366963 -984894 + ROOA_I LTR Pao 2076 2395 -4454 5 587 1769 38 0 0 chr4 366966 367178 -984679 + ROOA_I LTR Pao 2761 2972 -3877 5 587 180 0 0 0 chr4 367186 367206 -984651 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 587 6053 17 3 0 chr4 367266 367971 -983886 - TC1-2_DM DNA Tc1 0 1644 938 5 587 2790 46 21 24 chr4 367973 368352 -983505 - TC1-2_DM DNA Tc1 -1266 378 1 5 587 22 80 0 0 chr4 369138 369188 -982669 + AT_rich Low_complexity Low_complexity 1 50 0 5 587 23 33 0 0 chr4 369273 369303 -982554 + AT_rich Low_complexity Low_complexity 1 30 0 5 587 495 169 0 0 chr4 370848 370937 -980920 - DNAREP1_DM LINE Penelope -472 122 34 5 587 25 31 0 0 chr4 373444 373476 -978381 + AT_rich Low_complexity Low_complexity 1 32 0 5 587 348 283 99 28 chr4 373497 373639 -978218 + DNAREP1_DM LINE Penelope 286 437 -157 5 587 21 57 0 0 chr4 373699 373734 -978123 + AT_rich Low_complexity Low_complexity 1 35 0 5 587 21 0 0 0 chr4 373872 373893 -977964 + AT_rich Low_complexity Low_complexity 1 21 0 5 587 672 73 115 0 chr4 374136 374232 -977625 - BS3_DM LINE Jockey -11 1779 1673 5 587 207 139 0 0 chr4 374696 374732 -977125 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 5 587 26 0 0 0 chr4 374827 374853 -977004 + AT_rich Low_complexity Low_complexity 1 26 0 5 587 21 36 0 0 chr4 374928 374956 -976901 + AT_rich Low_complexity Low_complexity 1 28 0 5 587 1485 110 226 7 chr4 377279 377571 -974286 - DNAREP1_DM LINE Penelope -39 555 200 5 587 409 196 244 37 chr4 377618 377782 -974075 - DNAREP1_DM LINE Penelope -363 231 34 5 587 365 155 155 0 chr4 378102 378186 -973671 + DNAREP1_DM LINE Penelope 39 135 -459 5 587 1287 93 156 0 chr4 378190 378415 -973442 + DNAREP1_DM LINE Penelope 335 594 0 5 587 21 0 0 0 chr4 379396 379417 -972440 + AT_rich Low_complexity Low_complexity 1 21 0 5 587 23 0 0 0 chr4 379788 379811 -972046 + AT_rich Low_complexity Low_complexity 1 23 0 5 587 250 184 0 0 chr4 379969 380018 -971839 - DNAREP1_DM LINE Penelope -9 585 537 5 587 260 137 0 19 chr4 380145 380197 -971660 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 587 25 0 0 0 chr4 381182 381207 -970650 + AT_rich Low_complexity Low_complexity 1 25 0 5 587 2533 127 118 18 chr4 382055 382686 -969171 + DNAREP1_DM LINE Penelope 1 591 -3 5 587 297 186 0 63 chr4 382770 382833 -969024 - DNAREP1_DM LINE Penelope -113 481 423 5 587 873 167 125 54 chr4 387496 387757 -964100 - DNAREP1_DM LINE Penelope -148 446 56 5 587 357 253 0 0 chr4 387965 388048 -963809 - FW3_DM LINE Jockey -2773 359 277 6 587 1115 60 40 13 chr4 388050 388202 -963655 - PROTOP_A DNA P 0 1105 950 6 587 2878 35 0 0 chr4 388199 388539 -963318 - PROTOP_A DNA P -765 340 1 6 587 575 190 111 18 chr4 388539 388709 -963148 - FW3_DM LINE Jockey -2851 281 96 6 587 686 114 7 114 chr4 389020 389169 -962688 + Transib-N1_DM DNA Transib 292 424 -90 6 587 24 53 0 0 chr4 389242 389280 -962577 + AT_rich Low_complexity Low_complexity 1 38 0 6 587 265 109 31 0 chr4 389362 389426 -962431 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 587 33 0 0 0 chr4 389426 389459 -962398 + AT_rich Low_complexity Low_complexity 1 33 0 6 587 35 63 0 0 chr4 389522 389585 -962272 + AT_rich Low_complexity Low_complexity 1 63 0 6 587 484 188 85 8 chr4 389646 389775 -962082 + PROTOP DNA P 343 481 -3999 6 587 222 37 0 0 chr4 390011 390038 -961819 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 587 23 54 0 0 chr4 390089 390126 -961731 + AT_rich Low_complexity Low_complexity 1 37 0 6 587 2434 129 102 127 chr4 390607 391315 -960542 + PROTOP_B DNA P 1 690 -463 6 587 279 228 158 0 chr4 391315 391416 -960441 + PROTOP DNA P 1468 1584 -2896 6 587 881 77 381 0 chr4 391420 391624 -960233 + PROTOP DNA P 4197 4480 0 6 587 230 217 145 0 chr4 392056 392139 -959718 - DNAREP1_DM LINE Penelope 0 594 500 6 588 34 72 0 0 chr4 393371 393440 -958417 + AT_rich Low_complexity Low_complexity 1 69 0 6 588 23 0 0 0 chr4 393673 393696 -958161 + AT_rich Low_complexity Low_complexity 1 23 0 6 588 2287 123 120 2 chr4 394255 394672 -957185 - DNAREP1_DM LINE Penelope -98 496 31 6 588 778 40 0 20 chr4 394691 394792 -957065 - PROTOP DNA P -1 4479 4381 6 588 3351 40 146 19 chr4 394790 395372 -956485 - PROTOP DNA P -3821 659 1 6 588 303 214 286 0 chr4 396058 396170 -955687 + DNAREP1_DM LINE Penelope 410 553 -41 6 588 213 139 0 0 chr4 396921 396964 -954893 + (TGG)n Simple_repeat Simple_repeat 3 45 0 6 588 21 36 0 0 chr4 398299 398327 -953530 + AT_rich Low_complexity Low_complexity 1 28 0 6 588 2195 101 155 23 chr4 399656 400377 -951480 + DNAREP1_DM LINE Penelope 2 594 0 6 588 307 188 24 24 chr4 402145 402227 -949630 + DNAREP1_DM LINE Penelope 159 240 -354 6 588 903 184 66 5 chr4 402245 402442 -949415 + DNAREP1_DM LINE Penelope 32 240 -354 6 588 610 98 0 42 chr4 402442 402538 -949319 - DNAREP1_DM LINE Penelope -502 92 1 6 588 1481 171 129 17 chr4 403623 403980 -947877 - DNAREP1_DM LINE Penelope -7 587 191 6 588 916 170 107 17 chr4 403991 404225 -947632 - DNAREP1_DM LINE Penelope -339 255 1 6 588 384 157 191 12 chr4 404396 404480 -947377 + DNAREP1_DM LINE Penelope 440 538 -56 6 588 28 48 0 0 chr4 404631 404673 -947184 + AT_rich Low_complexity Low_complexity 1 42 0 6 588 27 29 0 0 chr4 404822 404856 -947001 + AT_rich Low_complexity Low_complexity 1 34 0 6 588 550 11 0 54 chr4 406768 406860 -944997 + (TA)n Simple_repeat Simple_repeat 1 87 0 6 588 21 36 0 0 chr4 407101 407129 -944728 + AT_rich Low_complexity Low_complexity 1 28 0 6 588 22 80 0 0 chr4 407929 407979 -943878 + AT_rich Low_complexity Low_complexity 1 50 0 6 588 225 236 0 18 chr4 408177 408233 -943624 - DNAREP1_DM LINE Penelope -259 335 281 6 588 360 202 0 146 chr4 410181 410291 -941566 - DNAREP1_DM LINE Penelope -135 459 366 6 588 1762 114 167 20 chr4 410398 410746 -941111 - DNAREP1_DM LINE Penelope -2 592 194 6 588 422 217 86 7 chr4 410736 410875 -940982 - DNAREP1_DM LINE Penelope -301 293 144 6 588 1271 168 118 14 chr4 412223 412663 -939194 + DNAREP1_DM LINE Penelope 130 526 -68 6 588 26 0 0 0 chr4 413314 413340 -938517 + AT_rich Low_complexity Low_complexity 1 26 0 6 588 225 280 0 0 chr4 414372 414422 -937435 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 6 588 28 71 0 0 chr4 414941 414997 -936860 + AT_rich Low_complexity Low_complexity 1 56 0 6 588 21 0 0 0 chr4 417558 417579 -934278 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 35 41 0 0 chr4 418982 419031 -932826 + AT_rich Low_complexity Low_complexity 1 49 0 6 588 22 35 0 0 chr4 419658 419687 -932170 + AT_rich Low_complexity Low_complexity 1 29 0 6 588 21 0 0 0 chr4 419951 419972 -931885 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 22 0 0 0 chr4 421139 421161 -930696 + AT_rich Low_complexity Low_complexity 1 22 0 6 588 24 53 0 0 chr4 422484 422522 -929335 + AT_rich Low_complexity Low_complexity 1 38 0 6 588 308 226 72 46 chr4 423348 423501 -928356 + DNAREP1_DM LINE Penelope 1 157 -437 6 588 281 0 0 0 chr4 423568 423602 -928255 + DNAREP1_DM LINE Penelope 80 113 -481 6 588 1840 97 208 14 chr4 423604 423953 -927904 + DNAREP1_DM LINE Penelope 178 594 0 6 588 372 253 59 20 chr4 423825 423978 -927879 - P_DG DNA P -6 2882 2724 6 588 291 176 43 29 chr4 424045 424115 -927742 - PENELOPE LINE Penelope -155 4006 3936 6 588 369 194 135 16 chr4 424120 424246 -927611 - DNAREP1_DM LINE Penelope -223 371 231 6 588 258 245 215 9 chr4 424299 424406 -927451 - DNAREP1_DM LINE Penelope -465 129 1 6 588 28 61 0 0 chr4 425232 425281 -926576 + AT_rich Low_complexity Low_complexity 1 49 0 6 588 241 241 0 0 chr4 425379 425437 -926420 + (TATG)n Simple_repeat Simple_repeat 2 59 0 6 588 29 28 0 0 chr4 426442 426478 -925379 + AT_rich Low_complexity Low_complexity 1 36 0 6 588 456 147 196 0 chr4 427796 427898 -923959 - DNAREP1_DM LINE Penelope -4 590 469 6 588 23 33 0 0 chr4 428271 428301 -923556 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 617 157 447 0 chr4 428304 428556 -923301 + DNAREP1_DM LINE Penelope 81 446 -148 6 588 425 152 171 0 chr4 429178 429283 -922574 - DNAREP1_DM LINE Penelope -16 578 456 6 588 591 216 106 22 chr4 429290 429470 -922387 - DNAREP1_DM LINE Penelope -385 209 15 6 588 260 179 18 18 chr4 429736 429793 -922064 - DNAREP1_DM LINE Penelope -36 558 502 6 588 2000 115 57 6 chr4 430087 430419 -921438 - DNAREP1_DM LINE Penelope -2 592 244 6 588 27 73 0 0 chr4 430473 430528 -921329 + AT_rich Low_complexity Low_complexity 1 55 0 6 588 21 0 0 0 chr4 430768 430789 -921068 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 662 124 0 0 chr4 431209 431306 -920551 - DNAREP1_DM LINE Penelope 0 594 498 6 588 206 163 20 0 chr4 431910 431959 -919898 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 6 588 228 204 41 0 chr4 432119 432168 -919689 - DNAREP1_DM LINE Penelope -30 564 514 6 588 242 182 127 0 chr4 433410 433465 -918392 - BS2 LINE Jockey 0 4721 4660 6 588 418 232 132 12 chr4 433517 433683 -918174 + DNAREP1_DM LINE Penelope 1 186 -408 6 588 428 106 282 0 chr4 433698 433783 -918074 + DNAREP1_DM LINE Penelope 260 368 -226 6 588 795 78 155 0 chr4 433796 433912 -917945 + DNAREP1_DM LINE Penelope 432 565 -29 6 588 277 164 14 56 chr4 434009 434080 -917777 + DNAREP1_DM LINE Penelope 526 593 -1 6 588 296 221 0 5 chr4 434103 434172 -917685 - BS2 LINE Jockey -191 4530 4474 6 588 312 223 205 8 chr4 434337 434459 -917398 - LINEJ1_DM LINE Jockey -13 5007 4862 6 588 291 217 0 0 chr4 434563 434623 -917234 - LINEJ1_DM LINE Jockey -418 4602 4543 6 588 225 0 0 0 chr4 434633 434658 -917199 + (T)n Simple_repeat Simple_repeat 1 25 0 6 588 5197 3 0 15 chr4 434658 435256 -916601 - LINEJ1_DM LINE Jockey 0 5020 4432 6 588 266 155 26 90 chr4 435297 435375 -916482 + BS3_DM LINE Jockey 1711 1783 -7 6 588 5205 3 0 12 chr4 435453 436049 -915808 - LINEJ1_DM LINE Jockey 0 5020 4432 6 588 266 155 26 90 chr4 436090 436168 -915689 + BS3_DM LINE Jockey 1711 1783 -7 6 588 1473 265 98 21 chr4 437629 438111 -913746 - BS2 LINE Jockey 0 4721 4203 6 588 360 194 47 31 chr4 438126 438254 -913603 + BS2 LINE Jockey 4562 4691 -30 6 588 1193 112 174 62 chr4 438261 438599 -913258 + DNAREP1_DM LINE Penelope 219 594 0 6 588 481 159 23 0 chr4 439829 439917 -911940 + DNAREP1_DM LINE Penelope 1 90 -504 6 588 287 232 72 12 chr4 439908 439991 -911866 + DNAREP1_DM LINE Penelope 403 490 -104 6 588 180 0 0 0 chr4 440635 440655 -911202 + (CATA)n Simple_repeat Simple_repeat 3 22 0 6 588 2461 115 31 2 chr4 440655 441099 -910758 + S_DM DNA Tc1 3 459 -1277 6 588 4609 109 88 7 chr4 441094 441858 -909999 + S_DM DNA Tc1 911 1736 0 6 588 789 101 0 0 chr4 441880 441989 -909868 + DNAREP1_DM LINE Penelope 1 109 -485 6 588 674 88 117 58 chr4 441986 442106 -909751 + DNAREP1_DM LINE Penelope 468 594 0 6 588 334 261 90 0 chr4 442988 443099 -908758 + DNAREP1_DM LINE Penelope 6 126 -468 6 588 1171 91 0 24 chr4 443180 443349 -908508 + DNAREP1_DM LINE Penelope 317 481 -113 6 588 352 132 0 0 chr4 443360 443413 -908444 + DNAREP1_DM LINE Penelope 542 594 0 6 588 24 67 0 0 chr4 445916 445961 -905896 + AT_rich Low_complexity Low_complexity 1 45 0 6 588 24 0 0 0 chr4 448694 448718 -903139 + AT_rich Low_complexity Low_complexity 1 24 0 6 588 220 83 42 0 chr4 448718 448766 -903091 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 588 22 0 0 0 chr4 449794 449816 -902041 + AT_rich Low_complexity Low_complexity 1 22 0 6 588 403 99 50 0 chr4 449857 449958 -901899 + (TA)n Simple_repeat Simple_repeat 2 107 0 6 588 21 0 0 0 chr4 449958 449979 -901878 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 599 208 237 14 chr4 449979 450197 -901660 + DNAREP1_DM LINE Penelope 320 586 -8 6 588 23 33 0 0 chr4 450583 450613 -901244 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 401 117 574 0 chr4 451896 452033 -899824 - PROTOP_B DNA P -65 1088 873 6 588 416 191 13 60 chr4 452111 452261 -899596 - PROTOP_B DNA P -468 685 544 6 588 238 182 50 38 chr4 452297 452377 -899480 - PROTOP_B DNA P -824 329 249 6 588 406 88 412 0 chr4 452391 452470 -899387 - DNAREP1_DM LINE Penelope -49 545 434 6 588 1437 75 0 0 chr4 452470 452656 -899201 - PROTOP_B DNA P 0 1153 968 6 588 6253 103 49 54 chr4 452656 453815 -898042 + PROTOP_B DNA P 1 1153 0 6 588 1154 85 57 6 chr4 453816 453993 -897864 - PROTOP_B DNA P -180 973 788 6 588 2501 60 11 8 chr4 453974 454344 -897513 + S_DM DNA Tc1 1366 1736 0 6 588 4760 14 0 0 chr4 454344 454911 -896946 - PROTOP DNA P -541 3939 3373 6 588 3172 37 146 21 chr4 454900 455366 -896491 - PROTOP_B DNA P -595 558 35 6 588 2129 99 50 132 chr4 455375 455854 -896003 - DNAREP1_DM LINE Penelope -154 440 1 6 588 368 186 76 106 chr4 455849 456074 -895783 - G6_DM LINE Jockey -19 2023 1954 6 588 204 132 0 26 chr4 456111 456150 -895707 + (CGGA)n Simple_repeat Simple_repeat 4 41 0 6 588 27 49 0 0 chr4 456631 456672 -895185 + AT_rich Low_complexity Low_complexity 1 41 0 6 588 317 177 0 0 chr4 456748 456810 -895047 + DNAREP1_DM LINE Penelope 522 583 -11 6 588 593 159 108 60 chr4 456971 457138 -894719 + DNAREP1_DM LINE Penelope 1 175 -419 6 588 581 130 139 0 chr4 457203 457311 -894546 + DNAREP1_DM LINE Penelope 461 583 -11 6 588 22 0 0 0 chr4 457667 457689 -894168 + AT_rich Low_complexity Low_complexity 1 22 0 6 588 24 0 0 0 chr4 459575 459599 -892258 + AT_rich Low_complexity Low_complexity 1 24 0 6 588 24 53 0 0 chr4 459797 459835 -892022 + AT_rich Low_complexity Low_complexity 1 38 0 6 588 21 0 0 0 chr4 463173 463194 -888663 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 311 177 0 31 chr4 464955 465019 -886838 - DNAREP1_DM LINE Penelope -105 489 428 6 588 303 197 0 14 chr4 465044 465116 -886741 - DNAREP1_DM LINE Penelope -406 188 118 6 588 263 183 17 0 chr4 465127 465187 -886670 - DNAREP1_DM LINE Penelope -533 61 1 6 588 23 33 0 0 chr4 465352 465382 -886475 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 217 83 40 40 chr4 465434 465484 -886373 + (TTTAA)n Simple_repeat Simple_repeat 1 50 0 6 588 180 0 0 0 chr4 465512 465532 -886325 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 588 23 33 0 0 chr4 465563 465593 -886264 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 47 0 0 0 chr4 465643 465690 -886167 + AT_rich Low_complexity Low_complexity 1 47 0 6 588 27 0 0 0 chr4 466201 466228 -885629 + AT_rich Low_complexity Low_complexity 1 27 0 6 588 461 105 42 0 chr4 467127 467222 -884635 + (TA)n Simple_repeat Simple_repeat 2 100 0 6 588 243 149 21 0 chr4 468717 468729 -883128 + P_DG DNA P 2743 2755 -133 6 588 434 191 142 22 chr4 468729 468863 -882994 - DNAREP1_DM LINE Penelope 0 594 445 6 588 451 173 35 26 chr4 468905 469018 -882839 - DNAREP1_DM LINE Penelope -336 258 145 6 588 583 225 23 34 chr4 469126 469301 -882556 + DMRP1 Unknown Unknown 168 340 -6 6 588 2146 94 45 134 chr4 469373 469874 -881983 - DNAREP1_DM LINE Penelope 0 594 6 6 588 2285 95 64 142 chr4 469881 470416 -881441 + DNAREP1_DM LINE Penelope 117 584 -10 6 588 1905 121 229 73 chr4 471273 471787 -880070 - DNAREP1_DM LINE Penelope 0 594 1 6 588 222 182 65 0 chr4 472322 472399 -879458 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 588 30 27 0 0 chr4 472733 472770 -879087 + AT_rich Low_complexity Low_complexity 1 37 0 6 588 308 235 176 0 chr4 472883 472968 -878889 - DNAREP1_DM LINE Penelope -63 531 432 6 588 24 0 0 0 chr4 474628 474652 -877205 + AT_rich Low_complexity Low_complexity 1 24 0 6 588 5977 100 60 37 chr4 474691 475771 -876086 + PROTOP_A DNA P 1 1105 0 6 588 211 107 35 18 chr4 475771 475828 -876029 + (TTATA)n Simple_repeat Simple_repeat 4 61 0 6 588 412 188 261 34 chr4 475958 476134 -875723 - DNAREP1_DM LINE Penelope -155 439 224 6 588 296 219 0 0 chr4 476179 476243 -875614 - DNAREP1_DM LINE Penelope -486 108 45 6 588 418 220 142 17 chr4 476301 476421 -875436 + DNAREP1_DM LINE Penelope 394 528 -66 6 588 327 143 100 0 chr4 476414 476484 -875373 - DMCR1A LINE CR1 -53 4417 4341 6 588 638 130 0 39 chr4 476497 476601 -875256 - DMCR1A LINE CR1 -879 3591 3492 6 588 1038 145 0 18 chr4 476615 476784 -875073 - DMCR1A LINE CR1 -1445 3025 2860 6 588 940 19 0 0 chr4 476785 476892 -874965 - PROTOP_A DNA P 0 1105 999 6 588 447 79 0 0 chr4 476914 476977 -874880 - Gypsy12A_LTR LTR Gypsy -138 2142 2080 6 588 589 127 47 85 chr4 476978 477107 -874750 - Gypsy12A_LTR LTR Gypsy -2156 124 1 6 588 1543 140 7 54 chr4 477107 477380 -874477 - DMCR1A LINE CR1 -1722 2748 2489 6 588 9520 17 0 1 chr4 477382 478488 -873369 + PROTOP_A DNA P 1 1105 0 6 588 2396 165 166 19 chr4 478496 479076 -872781 - DMCR1A LINE CR1 -1996 2474 1810 6 588 2323 167 89 22 chr4 479072 479668 -872189 - DMCR1A LINE CR1 -3242 1228 503 6 588 636 167 136 0 chr4 479688 479817 -872040 - DMCR1A LINE CR1 -4059 411 265 6 588 1173 117 370 160 chr4 479817 480308 -871549 + DNAREP1_DM LINE Penelope 1 594 0 6 588 234 250 0 0 chr4 482228 482298 -869559 + CT-rich Low_complexity Low_complexity 1 70 0 6 588 29 47 0 0 chr4 483128 483171 -868686 + AT_rich Low_complexity Low_complexity 1 43 0 6 588 1083 111 6 12 chr4 483470 483643 -868214 + DNAREP1_DM LINE Penelope 335 506 -88 6 588 24 0 0 0 chr4 485967 485991 -865866 + AT_rich Low_complexity Low_complexity 1 24 0 6 588 226 184 0 0 chr4 486096 486134 -865723 + DNAREP1_DM LINE Penelope 1 38 -556 6 588 194 128 0 25 chr4 487808 487848 -864009 + (CTA)n Simple_repeat Simple_repeat 3 41 0 6 588 62 0 0 0 chr4 487921 487983 -863874 + AT_rich Low_complexity Low_complexity 1 62 0 6 588 23 78 0 0 chr4 488232 488283 -863574 + AT_rich Low_complexity Low_complexity 1 51 0 6 588 447 282 53 37 chr4 488732 488920 -862937 - DNAREP1_DM LINE Penelope -123 471 281 6 588 635 114 0 0 chr4 488995 489083 -862774 + FB4_DM DNA Tc1 1 88 -4001 6 588 946 169 193 32 chr4 489074 489474 -862383 + FB4_DM DNA Tc1 214 520 -3569 6 588 275 53 26 0 chr4 489582 489620 -862237 + FB4_DM DNA Tc1 4051 4089 0 6 588 198 208 0 0 chr4 489720 489768 -862089 + (TATG)n Simple_repeat Simple_repeat 4 51 0 6 588 23 33 0 0 chr4 489992 490022 -861835 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 33 0 0 0 chr4 490294 490327 -861530 + AT_rich Low_complexity Low_complexity 1 33 0 6 588 350 209 71 118 chr4 490342 490554 -861303 - PROTOP_A DNA P -196 909 708 6 588 727 258 33 37 chr4 490603 490873 -860984 - PROTOP DNA P -3160 1320 1052 6 588 235 260 27 14 chr4 490933 491007 -860850 + PROTOP DNA P 56 130 -4350 6 588 201 39 0 0 chr4 491093 491119 -860738 + (A)n Simple_repeat Simple_repeat 1 26 0 6 588 454 223 48 0 chr4 491268 491371 -860486 + PROTOP DNA P 4227 4337 -143 6 588 22 88 0 0 chr4 492041 492098 -859759 + AT_rich Low_complexity Low_complexity 1 57 0 6 588 29 0 0 0 chr4 495395 495424 -856433 + AT_rich Low_complexity Low_complexity 1 29 0 6 588 391 69 0 0 chr4 495772 495830 -856027 + DNAREP1_DM LINE Penelope 201 258 -336 6 588 2929 179 92 36 chr4 495859 496946 -854911 + FW_DM LINE Jockey 3505 4684 -8 6 588 461 86 143 0 chr4 496965 497035 -854822 + DNAREP1_DM LINE Penelope 515 594 0 6 588 709 166 150 22 chr4 497043 497275 -854582 + DNAREP1_DM LINE Penelope 100 315 -279 6 588 23 33 0 0 chr4 501780 501810 -850047 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 21 36 0 0 chr4 504162 504190 -847667 + AT_rich Low_complexity Low_complexity 1 28 0 6 588 589 162 100 29 chr4 505144 505284 -846573 - DNAREP1_DM LINE Penelope -46 548 399 6 588 24 0 0 0 chr4 505639 505663 -846194 + AT_rich Low_complexity Low_complexity 1 24 0 6 588 239 53 16 66 chr4 509148 509209 -842648 + (TAAAAA)n Simple_repeat Simple_repeat 1 58 0 6 588 272 171 0 26 chr4 509647 509725 -842132 + (CATA)n Simple_repeat Simple_repeat 4 79 0 6 588 229 0 26 53 chr4 509806 509844 -842013 + (CATA)n Simple_repeat Simple_repeat 2 38 0 6 588 202 170 21 21 chr4 511319 511367 -840490 + (TAAAG)n Simple_repeat Simple_repeat 2 49 0 6 588 358 208 13 0 chr4 512034 512111 -839746 + DNAREP1_DM LINE Penelope 3 80 -514 6 588 24 0 0 0 chr4 512114 512138 -839719 + AT_rich Low_complexity Low_complexity 1 24 0 6 588 337 146 0 0 chr4 512164 512219 -839638 + DNAREP1_DM LINE Penelope 380 434 -160 6 588 396 102 0 0 chr4 515094 515153 -836704 - DNAREP1_DM LINE Penelope 0 594 536 6 588 1327 186 159 18 chr4 515175 515515 -836342 - DNAREP1_DM LINE Penelope -206 388 1 6 588 34 55 0 0 chr4 515940 515995 -835862 + AT_rich Low_complexity Low_complexity 1 55 0 6 588 27 49 0 0 chr4 516719 516760 -835097 + AT_rich Low_complexity Low_complexity 1 41 0 6 588 406 163 279 41 chr4 516953 517100 -834757 + DNAREP1_DM LINE Penelope 413 594 0 6 588 21 0 0 0 chr4 517727 517748 -834109 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 22 56 0 0 chr4 518061 518097 -833760 + AT_rich Low_complexity Low_complexity 1 36 0 6 588 297 188 238 0 chr4 518821 518922 -832935 - DNAREP1_DM LINE Penelope -19 575 451 6 588 529 124 230 29 chr4 519081 519273 -832584 + DNAREP1_DM LINE Penelope 1 368 -226 6 588 245 67 0 0 chr4 519280 519310 -832547 + DNAREP1_DM LINE Penelope 565 594 0 6 588 277 57 0 0 chr4 519328 519363 -832494 + DNAREP1_DM LINE Penelope 350 384 -210 6 588 240 77 0 71 chr4 519389 519431 -832426 + DNAREP1_DM LINE Penelope 556 594 0 6 588 1475 165 38 16 chr4 519456 519906 -831951 - DNAREP1_DM LINE Penelope -259 335 1 6 588 2007 97 80 28 chr4 520306 520643 -831214 - DNAREP1_DM LINE Penelope 0 594 112 6 588 246 231 152 11 chr4 520671 520763 -831094 - DNAREP1_DM LINE Penelope -455 139 35 6 588 36 0 0 0 chr4 520866 520902 -830955 + AT_rich Low_complexity Low_complexity 1 36 0 6 588 26 30 0 0 chr4 520918 520951 -830906 + AT_rich Low_complexity Low_complexity 1 33 0 6 588 278 211 0 0 chr4 521009 521061 -830796 - DNAREP1_DM LINE Penelope -150 444 393 6 588 444 157 344 33 chr4 521150 521381 -830476 - DNAREP1_DM LINE Penelope -102 492 64 6 588 22 35 0 0 chr4 521401 521430 -830427 + AT_rich Low_complexity Low_complexity 1 29 0 6 589 22 0 0 0 chr4 524346 524368 -827489 + AT_rich Low_complexity Low_complexity 1 22 0 6 589 231 88 0 0 chr4 526446 526480 -825377 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 589 204 97 0 0 chr4 527588 527619 -824238 + (CGA)n Simple_repeat Simple_repeat 3 33 0 6 589 26 30 0 0 chr4 527738 527771 -824086 + AT_rich Low_complexity Low_complexity 1 33 0 6 589 1237 178 63 103 chr4 531238 531715 -820142 + DNAREP1_DM LINE Penelope 21 594 0 6 589 516 63 0 0 chr4 532080 532143 -819714 + PROTOP_B DNA P 1091 1153 0 6 589 25 31 0 0 chr4 532248 532280 -819577 + AT_rich Low_complexity Low_complexity 1 32 0 6 589 425 183 49 0 chr4 532298 532380 -819477 - DNAREP1_DM LINE Penelope -498 96 11 6 589 984 58 0 0 chr4 532430 532551 -819306 - DNAREP1_DM LINE Penelope -473 121 1 6 589 375 175 0 0 chr4 532876 532933 -818924 + DNAREP1_DM LINE Penelope 6 62 -532 6 589 21 0 0 0 chr4 533132 533153 -818704 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 433 44 29 0 chr4 533246 533314 -818543 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 589 741 63 0 0 chr4 533437 533532 -818325 - DNAREP1_DM LINE Penelope 0 594 500 6 589 3559 88 34 6 chr4 533527 534061 -817796 - FB4_DM DNA Tc1 -1329 2760 2212 6 589 4258 77 261 4 chr4 534059 534415 -817442 - FB4_DM DNA Tc1 -2191 1898 1455 6 589 210 71 0 0 chr4 534415 534443 -817414 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 589 4258 86 65 5 chr4 534443 534767 -817090 - FB4_DM DNA Tc1 -2635 1454 1108 6 589 1522 95 58 16 chr4 534765 535103 -816754 - DNAREP1_DM LINE Penelope -111 483 1 6 589 255 283 0 0 chr4 535144 535204 -816653 - DNAREP1_DM LINE Penelope -529 65 6 6 589 2373 136 164 30 chr4 536312 536813 -815044 + DNAREP1_DM LINE Penelope 27 594 0 6 589 341 265 71 56 chr4 538979 539175 -812682 + DNAREP1_DM LINE Penelope 286 484 -110 6 589 923 106 194 0 chr4 539297 539467 -812390 - DNAREP1_DM LINE Penelope -53 541 339 6 589 321 104 0 0 chr4 539456 539504 -812353 - DNAREP1_DM LINE Penelope -35 559 512 6 589 288 171 143 0 chr4 539682 539752 -812105 - DNAREP1_DM LINE Penelope -66 528 449 6 589 630 108 73 51 chr4 539774 539911 -811946 + DNAREP1_DM LINE Penelope 226 365 -229 6 589 1043 79 137 18 chr4 541020 541188 -810669 - DNAREP1_DM LINE Penelope -73 521 334 6 589 623 110 0 0 chr4 541182 541273 -810584 - DNAREP1_DM LINE Penelope -485 109 19 6 589 618 113 80 0 chr4 547277 547451 -804406 + DNAREP1_DM LINE Penelope 345 578 -16 6 589 303 151 0 0 chr4 547668 547721 -804136 + DNAREP1_DM LINE Penelope 542 594 0 6 589 253 146 0 0 chr4 547791 547832 -804025 + PROTOP_B DNA P 499 539 -614 6 589 30 27 0 0 chr4 547989 548026 -803831 + AT_rich Low_complexity Low_complexity 1 37 0 6 589 699 203 59 112 chr4 549449 549754 -802103 + DNAREP1_DM LINE Penelope 1 289 -305 6 589 265 218 0 0 chr4 549748 549803 -802054 + DNAREP1_DM LINE Penelope 182 236 -358 6 589 604 107 0 0 chr4 549851 549935 -801922 + DNAREP1_DM LINE Penelope 1 84 -510 6 589 353 73 0 0 chr4 549930 549985 -801872 + DNAREP1_DM LINE Penelope 272 326 -268 6 589 705 56 0 0 chr4 550004 550094 -801763 + DNAREP1_DM LINE Penelope 505 594 0 6 589 385 77 0 0 chr4 550102 550154 -801703 + DNAREP1_DM LINE Penelope 543 594 0 6 589 411 250 121 0 chr4 552996 553112 -798745 + DNAREP1_DM LINE Penelope 430 559 -35 6 589 529 223 8 32 chr4 553187 553312 -798545 + DNAREP1_DM LINE Penelope 371 492 -102 6 589 1645 171 135 92 chr4 556540 557095 -794762 + DNAREP1_DM LINE Penelope 3 581 -13 6 589 517 240 6 85 chr4 557148 557312 -794545 - DNAREP1_DM LINE Penelope -124 470 320 6 589 27 29 0 0 chr4 557413 557447 -794410 + AT_rich Low_complexity Low_complexity 1 34 0 6 589 30 27 0 0 chr4 557553 557590 -794267 + AT_rich Low_complexity Low_complexity 1 37 0 6 589 26 0 0 0 chr4 560046 560072 -791785 + AT_rich Low_complexity Low_complexity 1 26 0 6 589 29 0 0 0 chr4 560337 560366 -791491 + AT_rich Low_complexity Low_complexity 1 29 0 6 589 37 52 0 0 chr4 560733 560791 -791066 + AT_rich Low_complexity Low_complexity 1 58 0 6 589 1003 50 5 48 chr4 560796 560983 -790874 + (TA)n Simple_repeat Simple_repeat 2 180 0 6 589 26 30 0 0 chr4 561528 561561 -790296 + AT_rich Low_complexity Low_complexity 1 33 0 6 589 21 0 0 0 chr4 561847 561868 -789989 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 1394 166 100 0 chr4 562078 562367 -789490 - DNAREP1_DM LINE Penelope -104 490 173 6 589 1074 164 177 4 chr4 562370 562602 -789255 + DNAREP1_DM LINE Penelope 323 594 0 6 589 389 242 55 155 chr4 562621 562802 -789055 + DNAREP1_DM LINE Penelope 432 594 0 6 589 27 49 0 0 chr4 562828 562869 -788988 + AT_rich Low_complexity Low_complexity 1 41 0 6 589 315 127 18 0 chr4 563218 563273 -788584 + DNAREP1_DM LINE Penelope 539 594 0 6 589 1079 201 162 91 chr4 563699 564348 -787509 + DNAREP1_DM LINE Penelope 27 594 0 6 589 524 149 70 73 chr4 564975 565309 -786548 + DNAREP1_DM LINE Penelope 21 594 0 6 589 23 33 0 0 chr4 565887 565917 -785940 + AT_rich Low_complexity Low_complexity 1 30 0 6 589 27 29 0 0 chr4 569322 569356 -782501 + AT_rich Low_complexity Low_complexity 1 34 0 6 589 1767 128 180 8 chr4 569410 569802 -782055 + DNAREP1_DM LINE Penelope 84 542 -52 6 589 630 60 0 0 chr4 570500 570583 -781274 + (TAA)n Simple_repeat Simple_repeat 1 83 0 6 589 25 31 0 0 chr4 574422 574454 -777403 + AT_rich Low_complexity Low_complexity 1 32 0 6 589 1082 211 28 10 chr4 574973 575261 -776596 - DNAREP1_DM LINE Penelope -301 293 1 6 589 25 51 0 0 chr4 575412 575451 -776406 + AT_rich Low_complexity Low_complexity 1 39 0 6 589 30 0 0 0 chr4 576114 576144 -775713 + AT_rich Low_complexity Low_complexity 1 30 0 6 589 1057 152 65 10 chr4 576222 576422 -775435 - DNAREP1_DM LINE Penelope -157 437 227 6 589 225 268 14 14 chr4 576419 576491 -775366 - DNAREP1_DM LINE Penelope -522 72 1 6 589 303 200 0 0 chr4 576521 576581 -775276 - DNAREP1_DM LINE Penelope -8 586 527 6 589 296 64 0 21 chr4 576581 576629 -775228 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 589 21 0 0 0 chr4 576703 576724 -775133 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 192 77 0 0 chr4 579305 579331 -772526 + (CATA)n Simple_repeat Simple_repeat 1 26 0 6 589 299 212 12 0 chr4 579632 579717 -772140 + (TA)n Simple_repeat Simple_repeat 1 86 0 6 589 25 51 0 0 chr4 579907 579946 -771911 + AT_rich Low_complexity Low_complexity 1 39 0 6 589 22 0 0 0 chr4 580229 580251 -771606 + AT_rich Low_complexity Low_complexity 1 22 0 6 589 21 36 0 0 chr4 581471 581499 -770358 + AT_rich Low_complexity Low_complexity 1 28 0 6 589 5408 54 110 6 chr4 581511 582330 -769527 + FB4_DM DNA Tc1 1 904 -3185 6 589 7857 47 25 58 chr4 582330 583545 -768312 + FB4_DM DNA Tc1 2916 4089 0 6 589 27 0 0 0 chr4 583635 583662 -768195 + AT_rich Low_complexity Low_complexity 1 27 0 6 589 224 213 33 0 chr4 583870 583992 -767865 + (TA)n Simple_repeat Simple_repeat 1 126 0 6 589 324 116 114 14 chr4 585776 585846 -766011 - DNAREP1_DM LINE Penelope -502 92 16 6 589 21 57 0 0 chr4 587281 587316 -764541 + AT_rich Low_complexity Low_complexity 1 35 0 6 589 24 32 0 0 chr4 587634 587665 -764192 + AT_rich Low_complexity Low_complexity 1 31 0 6 589 24 67 0 0 chr4 588907 588952 -762905 + AT_rich Low_complexity Low_complexity 1 45 0 6 589 278 56 0 0 chr4 590233 590269 -761588 - PROTOP_B DNA P -614 539 504 6 589 28 35 0 49 chr4 590365 590426 -761431 + AT_rich Low_complexity Low_complexity 1 58 0 6 589 27 29 0 0 chr4 590497 590531 -761326 + AT_rich Low_complexity Low_complexity 1 34 0 6 589 29 47 0 0 chr4 592079 592122 -759735 + AT_rich Low_complexity Low_complexity 1 43 0 6 589 21 0 0 0 chr4 592991 593012 -758845 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 33 0 0 0 chr4 596293 596326 -755531 + AT_rich Low_complexity Low_complexity 1 33 0 6 589 454 176 48 29 chr4 597207 597312 -754545 + DNAREP1_DM LINE Penelope 353 459 -135 6 589 33 56 0 0 chr4 597547 597601 -754256 + AT_rich Low_complexity Low_complexity 1 54 0 6 589 43 64 0 0 chr4 599105 599183 -752674 + AT_rich Low_complexity Low_complexity 1 78 0 6 589 546 57 0 0 chr4 600551 600621 -751236 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 589 31 0 0 0 chr4 600707 600738 -751119 + AT_rich Low_complexity Low_complexity 1 31 0 6 589 245 167 0 0 chr4 600944 600992 -750865 + FW2_DM LINE Jockey 1647 1694 -2267 6 589 227 272 138 30 chr4 601410 601577 -750280 + FW_DM LINE Jockey 3483 3667 -1025 6 589 324 160 200 0 chr4 601548 601623 -750234 + FB4_DM DNA Tc1 17 106 -3983 6 589 317 149 14 95 chr4 601591 601665 -750192 + FB4_DM DNA Tc1 209 276 -3813 6 589 254 111 22 0 chr4 601800 601845 -750012 + FB4_DM DNA Tc1 231 276 -3813 6 589 254 111 22 0 chr4 601980 602025 -749832 + FB4_DM DNA Tc1 231 276 -3813 6 589 30 77 0 0 chr4 602270 602335 -749522 + AT_rich Low_complexity Low_complexity 1 65 0 6 589 250 140 140 0 chr4 602519 602576 -749281 + FB4_DM DNA Tc1 558 622 -3467 6 589 303 167 82 10 chr4 602557 602654 -749203 - FB4_DM DNA Tc1 -3407 682 579 6 589 728 191 119 43 chr4 602575 602873 -748984 + FB4_DM DNA Tc1 3464 3952 -137 6 589 362 294 85 26 chr4 603109 603298 -748559 + FW2_DM LINE Jockey 3278 3477 -484 6 589 371 165 297 0 chr4 603438 603529 -748328 + DNAREP1_DM LINE Penelope 415 532 -62 6 589 188 67 33 0 chr4 604123 604153 -747704 + (TTA)n Simple_repeat Simple_repeat 1 31 0 6 589 340 301 79 16 chr4 604769 604958 -746899 - DNAREP1_DM LINE Penelope -271 323 123 6 589 40 0 0 0 chr4 605200 605240 -746617 + AT_rich Low_complexity Low_complexity 1 40 0 6 589 21 0 0 0 chr4 605292 605313 -746544 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 552 27 81 0 chr4 606879 606953 -744904 + LSU-rRNA_Dme rRNA rRNA 1689 1768 -2132 6 589 416 151 14 0 chr4 607129 607202 -744655 - DNAREP1_DM LINE Penelope -359 235 162 6 589 594 228 85 12 chr4 607190 607354 -744503 - DNAREP1_DM LINE Penelope -131 463 288 6 589 319 171 675 0 chr4 610013 610126 -741731 - DNAREP1_DM LINE Penelope 0 594 405 6 589 28 29 0 0 chr4 612127 612162 -739695 + AT_rich Low_complexity Low_complexity 1 35 0 6 589 446 70 0 0 chr4 612209 612266 -739591 - DNAREP1_DM LINE Penelope -107 487 431 6 589 25868 17 25 1 chr4 612263 616694 -735163 + R1_DM LINE R1 820 5356 0 6 589 657 163 91 14 chr4 616691 616834 -735023 - DNAREP1_DM LINE Penelope -147 447 294 6 589 29 47 0 0 chr4 617069 617112 -734745 + AT_rich Low_complexity Low_complexity 1 43 0 6 589 1295 191 63 115 chr4 617565 618080 -733777 - DNAREP1_DM LINE Penelope 0 594 117 6 589 745 97 0 9 chr4 618095 618209 -733648 - DNAREP1_DM LINE Penelope -415 179 67 6 589 24 53 0 0 chr4 619512 619550 -732307 + AT_rich Low_complexity Low_complexity 1 38 0 6 589 21 57 0 0 chr4 619902 619937 -731920 + AT_rich Low_complexity Low_complexity 1 35 0 6 589 28 0 0 0 chr4 620237 620265 -731592 + AT_rich Low_complexity Low_complexity 1 28 0 6 589 32 0 0 0 chr4 622332 622364 -729493 + AT_rich Low_complexity Low_complexity 1 32 0 6 589 763 210 81 30 chr4 622844 623080 -728777 + DNAREP1_DM LINE Penelope 1 248 -346 6 589 506 128 308 0 chr4 623088 623205 -728652 + DNAREP1_DM LINE Penelope 442 594 0 6 589 21 57 0 0 chr4 623225 623260 -728597 + AT_rich Low_complexity Low_complexity 1 35 0 6 589 648 111 49 6 chr4 623430 623593 -728264 + (TA)n Simple_repeat Simple_repeat 1 170 0 6 589 26 0 0 0 chr4 624882 624908 -726949 + AT_rich Low_complexity Low_complexity 1 26 0 6 589 24 0 0 0 chr4 624992 625016 -726841 + AT_rich Low_complexity Low_complexity 1 24 0 6 589 461 211 0 0 chr4 625106 625196 -726661 - DNAREP1_DM LINE Penelope -3 591 502 6 589 774 122 266 17 chr4 625232 625461 -726396 + DNAREP1_DM LINE Penelope 8 293 -301 6 589 350 109 156 0 chr4 625471 625535 -726322 - DNAREP1_DM LINE Penelope -48 546 473 6 589 606 167 34 34 chr4 629416 629534 -722323 + DNAREP1_DM LINE Penelope 346 463 -131 6 589 225 241 0 0 chr4 630149 630203 -721654 - FW3_DM LINE Jockey -2509 623 570 6 589 584 230 72 51 chr4 630267 630594 -721263 + FB4_DM DNA Tc1 138 643 -3446 6 589 29 0 0 0 chr4 630685 630714 -721143 + AT_rich Low_complexity Low_complexity 1 29 0 6 589 213 39 0 0 chr4 630992 631018 -720839 + (CATATA)n Simple_repeat Simple_repeat 5 30 0 6 589 22 0 0 0 chr4 631370 631392 -720465 + AT_rich Low_complexity Low_complexity 1 22 0 6 589 7512 52 56 13 chr4 632994 634054 -717803 - PROTOP_A DNA P 0 1105 1 6 589 188 100 25 0 chr4 635503 635543 -716314 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 589 186 0 57 29 chr4 636563 636598 -715259 + (TA)n Simple_repeat Simple_repeat 1 36 0 6 589 932 81 0 0 chr4 637271 637395 -714462 - DNAREP1_DM LINE Penelope -470 124 1 6 589 180 0 0 0 chr4 637908 637928 -713929 + (TTTTTA)n Simple_repeat Simple_repeat 1 20 0 6 589 22 0 0 0 chr4 638614 638636 -713221 + AT_rich Low_complexity Low_complexity 1 22 0 6 589 23 54 0 0 chr4 638871 638908 -712949 + AT_rich Low_complexity Low_complexity 1 37 0 6 589 364 64 0 0 chr4 639952 639999 -711858 - DNAREP1_DM LINE Penelope -159 435 389 6 589 24 0 0 0 chr4 641037 641061 -710796 + AT_rich Low_complexity Low_complexity 1 24 0 6 589 26 0 0 0 chr4 641897 641923 -709934 + AT_rich Low_complexity Low_complexity 1 26 0 6 589 30 69 0 0 chr4 642679 642737 -709120 + AT_rich Low_complexity Low_complexity 1 58 0 6 589 1078 118 350 26 chr4 642750 643128 -708729 + DNAREP1_DM LINE Penelope 1 545 -49 6 589 23 114 0 0 chr4 643190 643304 -708553 + AT_rich Low_complexity Low_complexity 1 114 0 6 589 1194 155 205 24 chr4 646905 647242 -704615 + DNAREP1_DM LINE Penelope 125 476 -118 6 589 21 36 0 0 chr4 647367 647395 -704462 + AT_rich Low_complexity Low_complexity 1 28 0 6 589 2184 100 40 8 chr4 647502 647856 -704001 - Jockey2 LINE Jockey 0 3428 3064 6 589 227 56 0 77 chr4 648019 648058 -703799 - PROTOP_B DNA P -613 540 505 6 589 28 86 0 0 chr4 648112 648182 -703675 + AT_rich Low_complexity Low_complexity 1 70 0 6 589 229 81 0 98 chr4 648514 648555 -703302 - DNAREP1_DM LINE Penelope -58 536 500 6 589 802 129 14 0 chr4 648556 648696 -703161 - Gypsy9_LTR LTR Gypsy 0 336 195 6 589 301 214 0 0 chr4 648749 648819 -703038 - DNAREP1_DM LINE Penelope -340 254 185 6 589 735 141 73 45 chr4 649189 649367 -702490 + DNAREP1_DM LINE Penelope 2 184 -410 6 589 625 147 107 15 chr4 649366 649497 -702360 + DNAREP1_DM LINE Penelope 452 594 0 6 589 264 217 17 0 chr4 649501 649561 -702296 + (TATG)n Simple_repeat Simple_repeat 2 62 0 6 589 706 164 98 57 chr4 649614 649808 -702049 - DNAREP1_DM LINE Penelope -45 549 348 6 589 757 168 0 0 chr4 651109 651240 -700617 - DNAREP1_DM LINE Penelope -463 131 1 6 589 1152 162 83 8 chr4 651261 651493 -700364 - DNAREP1_DM LINE Penelope -1 593 344 6 589 967 102 95 0 chr4 651493 651640 -700217 - DNAREP1_DM LINE Penelope 0 594 434 6 589 268 132 0 0 chr4 651685 651723 -700134 - DNAREP1_DM LINE Penelope -52 542 505 6 589 189 0 0 0 chr4 651723 651744 -700113 + (TA)n Simple_repeat Simple_repeat 2 22 0 6 589 958 133 160 0 chr4 651749 651930 -699927 - DNAREP1_DM LINE Penelope -155 439 230 6 589 607 145 0 9 chr4 652046 652157 -699700 + DNAREP1_DM LINE Penelope 165 274 -320 6 589 28 29 0 0 chr4 652214 652249 -699608 + AT_rich Low_complexity Low_complexity 1 35 0 6 589 22 35 0 0 chr4 652767 652796 -699061 + AT_rich Low_complexity Low_complexity 1 29 0 6 589 235 118 0 0 chr4 653370 653404 -698453 + DNAREP1_DM LINE Penelope 1 34 -560 6 589 676 236 140 44 chr4 653455 653726 -698131 + DNAREP1_DM LINE Penelope 278 574 -20 6 589 21 0 0 0 chr4 653926 653947 -697910 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 25 65 0 0 chr4 654755 654801 -697056 + AT_rich Low_complexity Low_complexity 1 46 0 6 589 22 0 0 0 chr4 655197 655219 -696638 + AT_rich Low_complexity Low_complexity 1 22 0 6 590 198 0 0 0 chr4 655821 655843 -696014 + (TAATG)n Simple_repeat Simple_repeat 2 23 0 6 590 697 181 106 47 chr4 656425 656682 -695175 - DNAREP1_DM LINE Penelope -200 394 128 6 590 932 173 180 4 chr4 657389 657445 -694412 - DNAREP1_DM LINE Penelope -27 567 505 6 590 372 43 0 0 chr4 657445 657491 -694366 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 590 932 160 434 3 chr4 657491 657751 -694106 - DNAREP1_DM LINE Penelope -90 504 1 6 590 575 164 168 21 chr4 658913 659056 -692801 + DNAREP1_DM LINE Penelope 341 504 -90 6 590 30 0 0 0 chr4 659122 659152 -692705 + AT_rich Low_complexity Low_complexity 1 30 0 6 590 27 0 0 0 chr4 659462 659489 -692368 + AT_rich Low_complexity Low_complexity 1 27 0 6 590 1867 139 63 48 chr4 661397 661811 -690046 + DNAREP1_DM LINE Penelope 59 594 0 6 590 332 195 99 44 chr4 662033 662124 -689733 + DNAREP1_DM LINE Penelope 395 490 -104 6 590 295 136 17 17 chr4 662315 662375 -689482 - DNAREP1_DM LINE Penelope -1 593 534 6 590 505 156 346 17 chr4 662377 662610 -689247 - DNAREP1_DM LINE Penelope -285 309 1 6 590 309 77 135 0 chr4 663580 663632 -688225 + DNAREP1_DM LINE Penelope 1 59 -535 6 590 576 60 106 39 chr4 663638 663742 -688115 + DNAREP1_DM LINE Penelope 217 327 -267 6 590 521 65 91 0 chr4 663752 663829 -688028 + DNAREP1_DM LINE Penelope 496 579 -15 6 590 21 0 0 0 chr4 664007 664028 -687829 + AT_rich Low_complexity Low_complexity 1 21 0 6 590 1477 61 190 0 chr4 664143 664422 -687435 + Mariner2_DM DNA Tc1 1 332 -580 6 590 264 148 148 0 chr4 664826 664880 -686977 + DNAREP1_DM LINE Penelope 5 66 -528 6 590 21 0 0 0 chr4 664883 664904 -686953 + AT_rich Low_complexity Low_complexity 1 21 0 6 590 315 200 88 51 chr4 664979 665116 -686741 + DNAREP1_DM LINE Penelope 188 329 -265 6 590 29 28 0 0 chr4 665283 665319 -686538 + AT_rich Low_complexity Low_complexity 1 36 0 6 590 1136 174 98 32 chr4 665819 666181 -685676 + DNAREP1_DM LINE Penelope 1 548 -46 6 590 25 65 0 0 chr4 666199 666245 -685612 + AT_rich Low_complexity Low_complexity 1 46 0 6 590 2426 55 105 9 chr4 668151 668483 -683374 + Mariner2_DM DNA Tc1 1 364 -548 6 590 2846 51 56 3 chr4 668533 668907 -682950 + Mariner2_DM DNA Tc1 519 912 0 6 590 775 211 103 29 chr4 668966 669239 -682618 + DNAREP1_DM LINE Penelope 93 385 -209 6 590 207 0 0 0 chr4 670573 670596 -681261 + (T)n Simple_repeat Simple_repeat 1 23 0 6 590 322 349 0 0 chr4 671220 671329 -680528 + (CTG)n Simple_repeat Simple_repeat 2 110 0 6 590 21 0 0 0 chr4 671780 671801 -680056 + AT_rich Low_complexity Low_complexity 1 21 0 6 590 231 206 48 0 chr4 671819 671882 -679975 + DNAREP1_DM LINE Penelope 529 594 0 6 590 27 0 0 0 chr4 672828 672855 -679002 + AT_rich Low_complexity Low_complexity 1 27 0 6 590 259 75 0 0 chr4 673833 673873 -677984 + DNAREP1_DM LINE Penelope 209 248 -346 6 590 959 73 103 0 chr4 673872 674008 -677849 + DNAREP1_DM LINE Penelope 407 556 -38 6 590 43 0 0 0 chr4 675459 675502 -676355 + AT_rich Low_complexity Low_complexity 1 43 0 6 590 22 0 0 0 chr4 676355 676377 -675480 + AT_rich Low_complexity Low_complexity 1 22 0 6 590 309 156 47 94 chr4 679267 679352 -672505 - DNAREP1_DM LINE Penelope 0 594 514 6 590 332 197 0 0 chr4 679352 679418 -672439 - DNAREP1_DM LINE Penelope -188 406 341 6 590 249 170 0 21 chr4 683118 683166 -668691 + DNAREP1_DM LINE Penelope 289 335 -259 6 590 505 186 0 38 chr4 683208 683314 -668543 + DNAREP1_DM LINE Penelope 493 594 0 6 590 24 32 0 0 chr4 683640 683671 -668186 + AT_rich Low_complexity Low_complexity 1 31 0 6 590 26 30 0 0 chr4 685415 685448 -666409 + AT_rich Low_complexity Low_complexity 1 33 0 6 590 504 188 59 0 chr4 687728 687829 -664028 - DNAREP1_DM LINE Penelope -106 488 382 6 590 513 177 70 17 chr4 688447 688562 -663295 - DNAREP1_DM LINE Penelope -105 489 369 6 590 227 159 45 0 chr4 688563 688607 -663250 - DNAREP1_DM LINE Penelope -366 228 183 6 590 1230 58 0 0 chr4 688612 688767 -663090 + DNAREP1_DM LINE Penelope 8 162 -432 6 590 588 124 105 0 chr4 688768 688873 -662984 + DNAREP1_DM LINE Penelope 435 550 -44 6 590 227 147 0 0 chr4 690540 690574 -661283 - DNAREP1_DM LINE Penelope -560 34 1 6 590 374 152 177 0 chr4 690665 690744 -661113 - DNAREP1_DM LINE Penelope -10 584 492 6 590 693 205 48 0 chr4 690960 691126 -660731 - DNAREP1_DM LINE Penelope -415 179 6 6 590 3697 7 0 0 chr4 692285 692702 -659155 - TIRANT_LTR LTR Gypsy 0 417 1 6 590 69639 0 0 0 chr4 692702 700394 -651463 - TIRANT_I LTR Gypsy 0 7692 1 6 590 3697 7 0 0 chr4 700394 700811 -651046 - TIRANT_LTR LTR Gypsy 0 417 1 6 590 570 202 16 8 chr4 701940 702065 -649792 - DNAREP1_DM LINE Penelope -113 481 356 6 590 328 123 106 15 chr4 702145 702211 -649646 - DNAREP1_DM LINE Penelope -31 563 492 6 590 2413 24 162 0 chr4 702216 702544 -649313 + PROTOP_B DNA P 1 381 -772 6 590 1394 30 30 0 chr4 702632 702801 -649056 + PROTOP_B DNA P 902 1075 -78 6 590 4451 27 6 0 chr4 702797 703310 -648547 - TC1_DM DNA Tc1 -474 1192 677 6 590 4823 16 0 2 chr4 703310 703862 -647995 - R1_DM LINE R1 0 5356 4806 6 590 3221 51 132 2 chr4 703859 704461 -647396 - TC1_DM DNA Tc1 -986 680 1 6 590 281 59 0 0 chr4 704464 704498 -647359 - DNAREP1_DM LINE Penelope -118 476 443 6 590 652 256 98 5 chr4 704513 704737 -647120 - DNAREP1_DM LINE Penelope -199 395 151 6 590 293 47 0 23 chr4 704878 704922 -646935 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 590 361 160 13 13 chr4 707519 707595 -644262 - DNAREP1_DM LINE Penelope 0 594 519 6 590 22 0 0 0 chr4 707844 707866 -643991 + AT_rich Low_complexity Low_complexity 1 22 0 6 590 559 175 29 0 chr4 707876 707979 -643878 + DNAREP1_DM LINE Penelope 489 594 0 6 590 24 53 0 0 chr4 708150 708188 -643669 + AT_rich Low_complexity Low_complexity 1 38 0 6 590 28 48 0 0 chr4 709306 709348 -642509 + AT_rich Low_complexity Low_complexity 1 42 0 6 590 30 45 0 0 chr4 709882 709926 -641931 + AT_rich Low_complexity Low_complexity 1 44 0 6 590 26 50 0 0 chr4 710009 710049 -641808 + AT_rich Low_complexity Low_complexity 1 40 0 6 590 21 0 0 0 chr4 710422 710443 -641414 + AT_rich Low_complexity Low_complexity 1 21 0 6 590 25 65 0 0 chr4 710943 710989 -640868 + AT_rich Low_complexity Low_complexity 1 46 0 6 590 26 0 0 0 chr4 712379 712405 -639452 + AT_rich Low_complexity Low_complexity 1 26 0 6 590 47 44 0 0 chr4 715056 715124 -636733 + AT_rich Low_complexity Low_complexity 1 68 0 6 590 189 0 0 0 chr4 715369 715390 -636467 + (A)n Simple_repeat Simple_repeat 1 21 0 6 590 200 310 17 17 chr4 716180 716295 -635562 + (TA)n Simple_repeat Simple_repeat 1 115 0 6 590 21 71 0 0 chr4 716421 716463 -635394 + AT_rich Low_complexity Low_complexity 1 42 0 6 590 22 35 0 0 chr4 717777 717806 -634051 + AT_rich Low_complexity Low_complexity 1 29 0 6 590 1190 167 129 58 chr4 719388 719699 -632158 + DNAREP1_DM LINE Penelope 220 552 -42 6 590 273 250 0 53 chr4 720639 720715 -631142 + DNAREP1_DM LINE Penelope 375 446 -148 6 590 238 118 78 0 chr4 721564 721615 -630242 - DNAREP1_DM LINE Penelope -422 172 118 6 590 256 226 0 0 chr4 723013 723066 -628791 + DNAREP1_DM LINE Penelope 1 53 -541 6 590 262 272 137 26 chr4 726320 726437 -625420 - DNAREP1_DM LINE Penelope -147 447 318 6 590 549 126 35 88 chr4 726619 726732 -625125 - DNAREP1_DM LINE Penelope -104 490 384 6 590 290 235 36 24 chr4 726725 726808 -625049 - DNAREP1_DM LINE Penelope -510 84 1 6 590 846 156 133 0 chr4 727611 727784 -624073 + DNAREP1_DM LINE Penelope 1 196 -398 6 590 1004 72 132 0 chr4 727810 727962 -623895 + DNAREP1_DM LINE Penelope 413 584 -10 6 590 240 219 0 45 chr4 728839 728906 -622951 - PENELOPE LINE Penelope -116 4045 3982 6 590 293 184 78 13 chr4 730215 730292 -621565 + DNAREP1_DM LINE Penelope 3 84 -510 6 590 373 208 0 0 chr4 730518 730590 -621267 + DNAREP1_DM LINE Penelope 395 466 -128 6 590 483 62 15 0 chr4 730597 730662 -621195 + DNAREP1_DM LINE Penelope 529 594 0 6 590 21 36 0 0 chr4 731086 731114 -620743 + AT_rich Low_complexity Low_complexity 1 28 0 6 590 39 38 0 0 chr4 731913 731966 -619891 + AT_rich Low_complexity Low_complexity 1 53 0 6 590 1828 189 174 45 chr4 731976 732862 -618995 - LINEJ1_DM LINE Jockey -29 4991 3992 6 590 278 208 0 0 chr4 735653 735706 -616151 + DNAREP1_DM LINE Penelope 1 53 -541 6 590 26 64 0 0 chr4 737065 737112 -614745 + AT_rich Low_complexity Low_complexity 1 47 0 6 590 2287 73 159 5 chr4 737228 737599 -614258 + DNAREP1_DM LINE Penelope 1 428 -166 6 590 24 0 0 0 chr4 738254 738278 -613579 + AT_rich Low_complexity Low_complexity 1 24 0 6 590 301 226 49 65 chr4 740686 740809 -611048 - DNAREP1_DM LINE Penelope -434 160 40 6 590 251 141 0 169 chr4 742420 742497 -609360 - Transib-N1_DM DNA Transib -431 83 20 6 590 185 108 27 0 chr4 743595 743632 -608225 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 590 601 83 0 23 chr4 743632 743718 -608139 - DNAREP1_DM LINE Penelope -491 103 20 6 590 509 102 318 16 chr4 743723 743852 -608005 + DNAREP1_DM LINE Penelope 146 313 -281 6 590 524 201 32 79 chr4 744550 744739 -607118 - DNAREP1_DM LINE Penelope -365 229 50 6 590 22 35 0 0 chr4 744779 744808 -607049 + AT_rich Low_complexity Low_complexity 1 29 0 6 590 23 54 0 0 chr4 745154 745191 -606666 + AT_rich Low_complexity Low_complexity 1 37 0 6 590 29 0 0 0 chr4 747234 747263 -604594 + AT_rich Low_complexity Low_complexity 1 29 0 6 590 24 32 0 0 chr4 747593 747624 -604233 + AT_rich Low_complexity Low_complexity 1 31 0 6 590 438 207 0 0 chr4 748461 748543 -603314 + DNAREP1_DM LINE Penelope 3 84 -510 6 590 25 0 0 0 chr4 750230 750255 -601602 + AT_rich Low_complexity Low_complexity 1 25 0 6 590 734 77 248 23 chr4 750413 750546 -601311 - DNAREP1_DM LINE Penelope -2 592 430 6 590 1167 146 121 36 chr4 750573 750879 -600978 - DNAREP1_DM LINE Penelope -261 333 2 6 590 22 0 0 0 chr4 752135 752157 -599700 + AT_rich Low_complexity Low_complexity 1 22 0 6 590 206 325 0 13 chr4 752793 752871 -598986 + GA-rich Low_complexity Low_complexity 2 78 0 6 590 23 68 0 0 chr4 754465 754509 -597348 + AT_rich Low_complexity Low_complexity 1 44 0 6 590 23 0 0 0 chr4 755477 755500 -596357 + AT_rich Low_complexity Low_complexity 1 23 0 6 590 205 293 13 0 chr4 757301 757376 -594481 + CT-rich Low_complexity Low_complexity 2 77 0 6 590 245 167 50 50 chr4 757842 757943 -593914 + (TA)n Simple_repeat Simple_repeat 1 101 0 6 590 30 45 0 0 chr4 758052 758096 -593761 + AT_rich Low_complexity Low_complexity 1 44 0 6 590 23 0 0 0 chr4 762433 762456 -589401 + AT_rich Low_complexity Low_complexity 1 23 0 6 590 362 162 0 0 chr4 762562 762630 -589227 - DNAREP1_DM LINE Penelope -3 591 524 6 590 315 49 0 0 chr4 764249 764290 -587567 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 590 21 57 0 0 chr4 764464 764499 -587358 + AT_rich Low_complexity Low_complexity 1 35 0 6 590 29 0 0 0 chr4 765109 765138 -586719 + AT_rich Low_complexity Low_complexity 1 29 0 6 590 22 35 0 0 chr4 765259 765288 -586569 + AT_rich Low_complexity Low_complexity 1 29 0 6 590 270 158 40 40 chr4 766967 767066 -584791 + (TATAA)n Simple_repeat Simple_repeat 5 103 0 6 590 21 0 0 0 chr4 767079 767100 -584757 + AT_rich Low_complexity Low_complexity 1 21 0 6 590 26 50 0 0 chr4 767522 767562 -584295 + AT_rich Low_complexity Low_complexity 1 40 0 6 590 735 186 192 66 chr4 769863 770076 -581781 - DNAREP1_DM LINE Penelope -31 563 324 6 590 484 221 8 16 chr4 770139 770268 -581589 - DNAREP1_DM LINE Penelope -434 160 33 6 590 28 29 0 0 chr4 770278 770313 -581544 + AT_rich Low_complexity Low_complexity 1 35 0 6 590 372 156 182 0 chr4 770406 770481 -581376 - DNAREP1_DM LINE Penelope -58 536 448 6 590 703 25 0 0 chr4 770481 770561 -581296 - PROTOP_B DNA P 0 1153 1074 6 590 799 184 132 44 chr4 770588 770816 -581041 - DNAREP1_DM LINE Penelope -137 457 210 6 590 267 125 104 0 chr4 770817 770865 -580992 - DNAREP1_DM LINE Penelope -541 53 1 6 590 28 48 0 0 chr4 770990 771032 -580825 + AT_rich Low_complexity Low_complexity 1 42 0 6 590 336 237 92 8 chr4 772142 772261 -579596 - DNAREP1_DM LINE Penelope -31 563 435 6 590 345 170 42 51 chr4 772337 772455 -579402 - DNAREP1_DM LINE Penelope -286 308 192 6 590 350 125 18 0 chr4 772485 772541 -579316 - DNAREP1_DM LINE Penelope -506 88 32 6 590 41 0 0 0 chr4 772551 772592 -579265 + AT_rich Low_complexity Low_complexity 1 41 0 6 590 28 48 0 0 chr4 773795 773837 -578020 + AT_rich Low_complexity Low_complexity 1 42 0 6 590 228 171 157 0 chr4 777758 777785 -574072 + P_DG DNA P 2718 2755 -133 6 590 1641 131 105 25 chr4 777785 778099 -573758 - DNAREP1_DM LINE Penelope 0 594 256 6 590 21 71 0 0 chr4 778103 778145 -573712 + AT_rich Low_complexity Low_complexity 1 42 0 6 591 249 133 156 0 chr4 789886 789931 -561926 + DNAREP1_DM LINE Penelope 343 394 -200 6 591 313 135 19 0 chr4 789987 790039 -561818 + DNAREP1_DM LINE Penelope 540 592 -2 6 591 21 71 0 0 chr4 790352 790394 -561463 + AT_rich Low_complexity Low_complexity 1 42 0 6 591 407 85 0 0 chr4 790425 790484 -561373 + DNAREP1_DM LINE Penelope 524 582 -12 6 591 28 0 0 0 chr4 790486 790514 -561343 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 316 285 92 65 chr4 790603 790787 -561070 - DNAREP1_DM LINE Penelope -2 592 404 6 591 22 0 0 0 chr4 792393 792415 -559442 + AT_rich Low_complexity Low_complexity 1 22 0 6 591 1091 29 7 0 chr4 793833 793969 -557888 + TC1_DM DNA Tc1 1 137 -1529 6 591 3854 30 0 0 chr4 793967 794431 -557426 + TC1_DM DNA Tc1 1203 1666 0 6 591 46 19 0 0 chr4 794748 794801 -557056 + AT_rich Low_complexity Low_complexity 1 53 0 6 591 22 0 0 0 chr4 795313 795335 -556522 + AT_rich Low_complexity Low_complexity 1 22 0 6 591 210 262 16 0 chr4 796278 796339 -555518 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 6 591 25 51 0 0 chr4 796672 796711 -555146 + AT_rich Low_complexity Low_complexity 1 39 0 6 591 22 0 0 0 chr4 799080 799102 -552755 + AT_rich Low_complexity Low_complexity 1 22 0 6 591 40 49 0 0 chr4 799150 799211 -552646 + AT_rich Low_complexity Low_complexity 1 61 0 6 591 22 35 0 0 chr4 799243 799272 -552585 + AT_rich Low_complexity Low_complexity 1 29 0 6 591 1743 131 40 6 chr4 802320 802750 -549107 + DNAREP1_DM LINE Penelope 1 574 -20 6 591 1343 68 45 0 chr4 802750 802927 -548930 - PROTOP_B DNA P 0 1153 969 6 591 601 124 60 15 chr4 802933 803095 -548762 - PROTOP_B DNA P -719 434 361 6 591 192 77 0 0 chr4 803095 803121 -548736 + (CATA)n Simple_repeat Simple_repeat 3 28 0 6 591 601 88 60 26 chr4 803121 803169 -548688 - PROTOP_B DNA P -793 360 314 6 591 1207 88 141 0 chr4 803182 803374 -548483 - PROTOP_B DNA P -934 219 1 6 591 31 26 0 0 chr4 804566 804604 -547253 + AT_rich Low_complexity Low_complexity 1 38 0 6 591 2216 45 35 0 chr4 804782 805093 -546764 - TC1_DM DNA Tc1 0 1666 1345 6 591 3970 52 165 10 chr4 805102 806092 -545765 - TC1_DM DNA Tc1 -518 1148 5 6 591 2564 105 91 30 chr4 806313 806775 -545082 - FB4_DM DNA Tc1 -3599 490 1 6 591 225 132 0 0 chr4 809552 809590 -542267 - PROTOP DNA P -1 4479 4441 6 591 31326 13 2 0 chr4 809590 813204 -538653 - PROTOP DNA P 0 4480 860 6 591 309 73 0 0 chr4 817377 817418 -534439 - PROTOP DNA P -4247 233 193 6 591 1536 140 105 17 chr4 817600 818051 -533806 + DNAREP1_DM LINE Penelope 1 376 -218 6 591 680 0 119 0 chr4 818051 818648 -533209 + (TTA)n Simple_repeat Simple_repeat 1 668 0 6 591 237 200 0 28 chr4 818659 818731 -533126 + (TTATA)n Simple_repeat Simple_repeat 3 72 0 6 591 834 74 0 0 chr4 818818 818926 -532931 - DNAREP1_DM LINE Penelope -484 110 3 6 591 26 30 0 0 chr4 819057 819090 -532767 + AT_rich Low_complexity Low_complexity 1 33 0 6 591 263 180 17 33 chr4 819255 819335 -532522 - PROTOP DNA P -4291 189 114 6 591 26 30 0 0 chr4 820552 820585 -531272 + AT_rich Low_complexity Low_complexity 1 33 0 6 591 928 120 96 77 chr4 824094 824302 -527555 - DNAREP1_DM LINE Penelope 0 594 383 6 591 13703 19 15 1 chr4 824322 825942 -525915 + TC1-2_DM DNA Tc1 1 1644 0 6 591 741 168 127 19 chr4 826883 827095 -524762 - DNAREP1_DM LINE Penelope -296 298 64 6 591 258 206 98 49 chr4 827128 827230 -524627 - DNAREP1_DM LINE Penelope -362 232 126 6 591 23 33 0 0 chr4 829538 829568 -522289 + AT_rich Low_complexity Low_complexity 1 30 0 6 591 934 104 342 18 chr4 829841 830060 -521797 + DNAREP1_DM LINE Penelope 305 594 0 6 591 234 180 20 0 chr4 830017 830067 -521790 - P_DG DNA P -90 2798 2748 6 591 21 57 0 0 chr4 831072 831107 -520750 + AT_rich Low_complexity Low_complexity 1 35 0 6 591 204 228 35 17 chr4 831258 831316 -520541 + A-rich Low_complexity Low_complexity 5 63 0 6 591 1894 128 31 3 chr4 831657 831979 -519878 + DNAREP1_DM LINE Penelope 13 343 -251 6 591 1014 114 388 14 chr4 835601 835900 -515957 - DNAREP1_DM LINE Penelope 0 594 184 6 591 254 163 0 0 chr4 835965 836014 -515843 + DNAREP1_DM LINE Penelope 371 419 -175 6 591 879 91 42 67 chr4 836950 837115 -514742 - DNAREP1_DM LINE Penelope -433 161 1 6 591 2430 108 219 14 chr4 837114 837606 -514251 - DNAREP1_DM LINE Penelope 0 594 2 6 591 29 0 0 0 chr4 837677 837706 -514151 + AT_rich Low_complexity Low_complexity 1 29 0 6 591 32 75 0 0 chr4 838160 838227 -513630 + AT_rich Low_complexity Low_complexity 1 67 0 6 591 235 222 0 0 chr4 838587 838632 -513225 + (TATG)n Simple_repeat Simple_repeat 4 48 0 6 591 225 208 0 19 chr4 839158 839212 -512645 + DNAREP1_DM LINE Penelope 439 491 -103 6 591 1147 166 47 4 chr4 840639 841042 -510815 + DNAREP1_DM LINE Penelope 20 332 -262 6 591 404 162 0 39 chr4 841050 841127 -510730 + DNAREP1_DM LINE Penelope 521 594 0 6 591 957 154 24 41 chr4 842249 842515 -509342 - DNAREP1_DM LINE Penelope -262 332 88 6 591 886 152 230 0 chr4 842554 842745 -509112 + DNAREP1_DM LINE Penelope 293 527 -67 6 591 418 196 0 47 chr4 842739 842846 -509011 - DNAREP1_DM LINE Penelope -272 322 221 6 591 291 95 0 0 chr4 842856 842898 -508959 + DNAREP1_DM LINE Penelope 553 594 0 6 591 1545 133 207 15 chr4 843333 843819 -508038 + DNAREP1_DM LINE Penelope 2 580 -14 6 591 261 194 214 79 chr4 843819 843959 -507898 - DNAREP1_DM LINE Penelope -263 331 173 6 591 470 179 0 0 chr4 843985 844069 -507788 - DNAREP1_DM LINE Penelope -510 84 1 6 591 21 0 0 0 chr4 844313 844334 -507523 + AT_rich Low_complexity Low_complexity 1 21 0 6 591 22 35 0 0 chr4 844604 844633 -507224 + AT_rich Low_complexity Low_complexity 1 29 0 6 591 244 86 0 0 chr4 845447 845482 -506375 - DNAREP1_DM LINE Penelope -31 563 529 6 591 245 200 164 41 chr4 845524 845597 -506260 - DNAREP1_DM LINE Penelope -141 453 372 6 591 566 202 101 18 chr4 846605 846778 -505079 - DNAREP1_DM LINE Penelope -1 593 447 6 591 412 198 103 8 chr4 849614 849731 -502126 - DNAREP1_DM LINE Penelope -465 129 2 6 591 245 137 281 10 chr4 849962 850058 -501799 + DNAREP1_DM LINE Penelope 151 272 -322 6 591 243 140 0 0 chr4 850646 850696 -501161 + (T)n Simple_repeat Simple_repeat 1 50 0 6 591 24 0 0 0 chr4 851545 851569 -500288 + AT_rich Low_complexity Low_complexity 1 24 0 6 591 35 0 0 0 chr4 855549 855584 -496273 + AT_rich Low_complexity Low_complexity 1 35 0 6 591 345 139 308 29 chr4 856759 856863 -494994 - DNAREP1_DM LINE Penelope -21 573 441 6 591 370 165 205 8 chr4 856891 857013 -494844 - DNAREP1_DM LINE Penelope -260 334 189 6 591 575 222 142 15 chr4 856995 857256 -494601 - DNAREP1_DM LINE Penelope -298 296 3 6 591 512 92 58 48 chr4 857297 857400 -494457 - DNAREP1_DM LINE Penelope -249 345 242 6 591 22 0 0 0 chr4 857708 857730 -494127 + AT_rich Low_complexity Low_complexity 1 22 0 6 591 22 35 0 0 chr4 859700 859729 -492128 + AT_rich Low_complexity Low_complexity 1 29 0 6 591 437 239 144 16 chr4 859800 859987 -491870 + DNAREP1_DM LINE Penelope 192 402 -192 6 591 1744 149 134 47 chr4 859997 860594 -491263 + DNAREP1_DM LINE Penelope 73 588 -6 6 591 15605 1 0 0 chr4 860623 862351 -489506 + BARI_DM DNA Tc1 1 1728 0 6 591 399 123 74 0 chr4 862366 862447 -489410 - FB4_DM DNA Tc1 -1329 2760 2674 6 591 5521 123 14 5 chr4 862447 863321 -488536 - FB4_DM DNA Tc1 -1699 2390 1509 6 591 1549 96 98 15 chr4 863319 863593 -488264 - DNAREP1_DM LINE Penelope -296 298 2 6 591 295 171 158 0 chr4 864408 864484 -487373 - DNAREP1_DM LINE Penelope -73 521 434 6 591 27 81 0 0 chr4 864814 864876 -486981 + AT_rich Low_complexity Low_complexity 1 62 0 6 591 1530 183 125 3 chr4 865855 866239 -485618 - DNAREP1_DM LINE Penelope 0 594 164 6 591 468 58 14 0 chr4 866301 866370 -485487 - DNAREP1_DM LINE Penelope -419 175 106 6 591 23 33 0 0 chr4 866373 866403 -485454 + AT_rich Low_complexity Low_complexity 1 30 0 6 591 25 0 0 0 chr4 866448 866473 -485384 + AT_rich Low_complexity Low_complexity 1 25 0 6 591 29 0 0 0 chr4 866707 866736 -485121 + AT_rich Low_complexity Low_complexity 1 29 0 6 591 303 103 0 0 chr4 867285 867324 -484533 + DNAREP1_DM LINE Penelope 12 50 -544 6 591 401 230 84 38 chr4 867321 867452 -484405 + DNAREP1_DM LINE Penelope 304 440 -154 6 591 401 153 163 12 chr4 867488 867574 -484283 + DNAREP1_DM LINE Penelope 431 529 -65 6 591 34 55 0 0 chr4 867991 868046 -483811 + AT_rich Low_complexity Low_complexity 1 55 0 6 591 503 27 284 0 chr4 868231 868305 -483552 - DNAREP1_DM LINE Penelope 0 594 500 6 591 6395 93 47 9 chr4 868300 869286 -482571 + FB4_DM DNA Tc1 1106 2128 -1961 6 591 2869 57 73 24 chr4 869287 869700 -482157 + FB4_DM DNA Tc1 2244 2676 -1413 6 591 327 78 0 0 chr4 869704 869755 -482102 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 591 327 78 0 0 chr4 869881 869932 -481925 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 591 23 78 0 0 chr4 870003 870054 -481803 + AT_rich Low_complexity Low_complexity 1 51 0 6 591 427 225 45 9 chr4 870210 870322 -481535 + DNAREP1_DM LINE Penelope 6 121 -473 6 591 591 137 0 0 chr4 871387 871511 -480346 + (TAA)n Simple_repeat Simple_repeat 2 125 0 6 591 248 111 0 0 chr4 872563 872599 -479258 + DNAREP1_DM LINE Penelope 559 594 0 6 591 224 125 77 15 chr4 873678 873743 -478114 + (TATAG)n Simple_repeat Simple_repeat 2 70 0 6 591 466 269 55 18 chr4 874344 874564 -477293 - PROTOP_A DNA P -181 924 697 6 591 265 191 0 0 chr4 874580 874627 -477230 - PROTOP DNA P -2882 1598 1552 6 591 590 151 216 60 chr4 874673 874905 -476952 - PROTOP DNA P -3806 674 405 6 591 30 27 0 0 chr4 875117 875154 -476703 + AT_rich Low_complexity Low_complexity 1 37 0 6 591 998 83 160 0 chr4 876860 877016 -474841 - DNAREP1_DM LINE Penelope 0 594 414 6 591 1041 91 118 0 chr4 877015 877201 -474656 - DNAREP1_DM LINE Penelope -386 208 1 6 591 948 111 110 6 chr4 877852 878016 -473841 + DNAREP1_DM LINE Penelope 232 412 -182 6 591 2940 17 84 0 chr4 878013 878369 -473488 + DMCR1A LINE CR1 2838 3223 -1247 6 591 8916 29 12 17 chr4 878369 879480 -472377 + PROTOP_A DNA P 1 1105 0 6 591 10807 23 1 0 chr4 879480 880733 -471124 + DMCR1A LINE CR1 3217 4470 0 6 591 981 122 103 17 chr4 880734 880909 -470948 + DNAREP1_DM LINE Penelope 405 594 0 6 591 33 56 0 0 chr4 882353 882407 -469450 + AT_rich Low_complexity Low_complexity 1 54 0 6 591 25 51 0 0 chr4 885306 885345 -466512 + AT_rich Low_complexity Low_complexity 1 39 0 6 591 437 154 200 9 chr4 887838 887943 -463914 - DNAREP1_DM LINE Penelope -151 443 319 6 591 25 0 0 0 chr4 887991 888016 -463841 + AT_rich Low_complexity Low_complexity 1 25 0 6 591 427 112 0 22 chr4 888199 888290 -463567 + (TA)n Simple_repeat Simple_repeat 1 89 0 6 591 21 0 0 0 chr4 889081 889102 -462755 + AT_rich Low_complexity Low_complexity 1 21 0 6 591 22 80 0 0 chr4 889383 889433 -462424 + AT_rich Low_complexity Low_complexity 1 50 0 6 591 23 33 0 0 chr4 890212 890242 -461615 + AT_rich Low_complexity Low_complexity 1 30 0 6 591 22 0 0 0 chr4 890635 890657 -461200 + AT_rich Low_complexity Low_complexity 1 22 0 6 591 1028 129 47 26 chr4 890692 890883 -460974 + DNAREP1_DM LINE Penelope 1 195 -399 6 591 994 85 176 0 chr4 890886 891039 -460818 + DNAREP1_DM LINE Penelope 415 594 0 6 591 200 189 0 36 chr4 891411 891466 -460391 + A-rich Low_complexity Low_complexity 4 56 0 6 591 380 224 10 10 chr4 892903 893002 -458855 + DNAREP1_DM LINE Penelope 24 122 -472 6 591 21 36 0 0 chr4 893752 893780 -458077 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 21 0 0 0 chr4 894561 894582 -457275 + AT_rich Low_complexity Low_complexity 1 21 0 6 591 21 36 0 0 chr4 895131 895159 -456698 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 374 237 31 0 chr4 895397 895494 -456363 + DNAREP1_DM LINE Penelope 315 414 -180 6 591 322 228 13 0 chr4 896504 896583 -455274 - DNAREP1_DM LINE Penelope -506 88 9 6 591 36 23 0 0 chr4 896667 896710 -455147 + AT_rich Low_complexity Low_complexity 1 43 0 6 591 39 22 0 0 chr4 896874 896920 -454937 + AT_rich Low_complexity Low_complexity 1 46 0 6 591 25 0 0 0 chr4 897832 897857 -454000 + AT_rich Low_complexity Low_complexity 1 25 0 6 591 865 193 64 28 chr4 898005 898256 -453601 + DMCR1A LINE CR1 2218 2477 -1993 6 591 325 185 31 0 chr4 898308 898373 -453484 + DNAREP1_DM LINE Penelope 349 415 -179 6 591 204 48 47 23 chr4 899013 899056 -452801 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 591 215 296 14 0 chr4 900062 900133 -451724 + (CATATA)n Simple_repeat Simple_repeat 4 75 0 6 591 23 0 0 0 chr4 900650 900673 -451184 + AT_rich Low_complexity Low_complexity 1 23 0 6 591 263 190 171 48 chr4 901716 901821 -450036 + DNAREP1_DM LINE Penelope 1 118 -476 6 591 226 118 0 0 chr4 901859 901893 -449964 - DNAREP1_DM LINE Penelope -557 37 4 6 591 38 22 0 0 chr4 902174 902219 -449638 + AT_rich Low_complexity Low_complexity 1 45 0 6 591 23 0 0 0 chr4 902702 902725 -449132 + AT_rich Low_complexity Low_complexity 1 23 0 6 591 58 24 0 12 chr4 905322 905386 -446471 + AT_rich Low_complexity Low_complexity 1 64 0 6 591 186 43 0 0 chr4 905386 905409 -446448 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 6 591 58 24 0 12 chr4 905409 905427 -446430 + AT_rich Low_complexity Low_complexity 1 18 0 6 591 21 36 0 0 chr4 905530 905558 -446299 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 613 182 64 57 chr4 905590 905730 -446127 + DNAREP1_DM LINE Penelope 341 481 -113 6 591 996 67 0 75 chr4 906811 906972 -444885 + DNAREP1_DM LINE Penelope 1 149 -445 6 591 1365 80 135 0 chr4 906979 907179 -444678 + DNAREP1_DM LINE Penelope 363 589 -5 6 591 405 77 0 0 chr4 907245 907297 -444560 + DNAREP1_DM LINE Penelope 19 70 -524 6 591 1056 73 0 7 chr4 915249 915400 -436457 - BARI1 DNA Tc1 -202 1548 1399 6 591 3834 172 55 74 chr4 915401 916450 -435407 - BARI1 DNA Tc1 -683 1067 39 6 591 451 144 156 0 chr4 916741 916831 -435026 + DNAREP1_DM LINE Penelope 469 572 -22 6 592 266 331 28 0 chr4 917899 918044 -433813 - DNAREP1_DM LINE Penelope -176 418 270 6 592 314 221 13 25 chr4 918068 918147 -433710 - DNAREP1_DM LINE Penelope -388 206 129 6 592 911 151 106 13 chr4 918207 918482 -433375 + DNAREP1_DM LINE Penelope 135 475 -119 6 592 26 0 0 0 chr4 918975 919001 -432856 + AT_rich Low_complexity Low_complexity 1 26 0 6 592 26 30 0 0 chr4 924101 924134 -427723 + AT_rich Low_complexity Low_complexity 1 33 0 6 592 224 77 0 25 chr4 924173 924213 -427644 + (CTATT)n Simple_repeat Simple_repeat 2 40 0 6 592 22 0 0 0 chr4 925748 925770 -426087 + AT_rich Low_complexity Low_complexity 1 22 0 6 592 1922 53 26 8 chr4 926760 927026 -424831 - TRANSIB3 DNA Transib -222 2661 2391 6 592 5367 48 21 4 chr4 927028 927726 -424131 - TRANSIB3 DNA Transib -1911 972 263 6 592 8886 24 27 0 chr4 928542 929618 -422239 + PROTOP_A DNA P 1 1105 0 6 592 1034 104 60 24 chr4 929901 930069 -421788 + DNAREP1_DM LINE Penelope 411 584 -10 6 592 22 0 0 0 chr4 930335 930357 -421500 + AT_rich Low_complexity Low_complexity 1 22 0 6 592 3824 5 2 0 chr4 930594 931016 -420841 - Invader1_LTR LTR Gypsy 0 423 1 6 592 3158 3 0 0 chr4 931024 931370 -420487 - Invader4_LTR LTR Gypsy 0 346 1 6 592 20986 8 13 3 chr4 931370 933760 -418097 - Invader4_I LTR Gypsy 0 2413 1 6 592 3158 3 0 0 chr4 933760 934106 -417751 - Invader4_LTR LTR Gypsy 0 346 1 6 592 21 0 0 0 chr4 934586 934607 -417250 + AT_rich Low_complexity Low_complexity 1 21 0 6 592 235 270 0 0 chr4 934800 934863 -416994 - NINJA_I LTR Pao -1702 4309 4247 6 592 2139 91 76 0 chr4 935140 935479 -416378 + DNAREP1_DM LINE Penelope 95 593 -1 6 592 23 33 0 0 chr4 936066 936096 -415761 + AT_rich Low_complexity Low_complexity 1 30 0 6 592 1049 136 151 23 chr4 937018 937236 -414621 - DNAREP1_DM LINE Penelope -8 586 341 6 592 771 148 81 17 chr4 937253 937425 -414432 + DNAREP1_DM LINE Penelope 176 358 -236 6 592 31 26 0 0 chr4 939122 939160 -412697 + AT_rich Low_complexity Low_complexity 1 38 0 6 592 33 0 0 0 chr4 941894 941927 -409930 + AT_rich Low_complexity Low_complexity 1 33 0 6 592 2350 85 215 100 chr4 941989 942497 -409360 + DNAREP1_DM LINE Penelope 1 566 -28 6 592 24 32 0 0 chr4 942646 942677 -409180 + AT_rich Low_complexity Low_complexity 1 31 0 6 592 298 272 17 17 chr4 944195 944311 -407546 + Mariner_DMA DNA Tc1 736 851 -435 6 592 315 159 14 14 chr4 944635 944705 -407152 - FB4_DM DNA Tc1 -1354 2735 2666 6 592 21 36 0 0 chr4 944705 944733 -407124 + AT_rich Low_complexity Low_complexity 1 28 0 6 592 1110 133 47 5 chr4 944799 945010 -406847 - FB4_DM DNA Tc1 -2769 1320 1101 6 592 21 0 0 0 chr4 945133 945154 -406703 + AT_rich Low_complexity Low_complexity 1 21 0 6 592 25 0 0 0 chr4 945644 945669 -406188 + AT_rich Low_complexity Low_complexity 1 25 0 6 592 227 185 215 0 chr4 945956 946021 -405836 + DNAREP1_DM LINE Penelope 362 440 -154 6 592 189 0 0 0 chr4 947338 947359 -404498 + (TTA)n Simple_repeat Simple_repeat 3 23 0 6 592 473 243 237 52 chr4 947416 947492 -404365 - DNAREP1_DM LINE Penelope -10 584 505 6 592 261 0 0 0 chr4 947492 947521 -404336 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 592 473 243 237 52 chr4 947521 947731 -404126 - DNAREP1_DM LINE Penelope -90 504 245 6 592 23 0 0 0 chr4 949222 949245 -402612 + AT_rich Low_complexity Low_complexity 1 23 0 6 592 251 182 176 29 chr4 949476 949544 -402313 + DNAREP1_DM LINE Penelope 457 534 -60 6 592 30 0 0 0 chr4 949861 949891 -401966 + AT_rich Low_complexity Low_complexity 1 30 0 6 592 29 75 0 31 chr4 950049 950146 -401711 + AT_rich Low_complexity Low_complexity 1 94 0 6 592 23 33 0 0 chr4 951215 951245 -400612 + AT_rich Low_complexity Low_complexity 1 30 0 6 592 24 67 0 0 chr4 951465 951510 -400347 + AT_rich Low_complexity Low_complexity 1 45 0 6 592 29 0 0 0 chr4 951873 951902 -399955 + AT_rich Low_complexity Low_complexity 1 29 0 6 592 3065 80 4 47 chr4 951902 952373 -399484 - DMCR1A LINE CR1 0 4470 4020 6 592 9019 27 10 7 chr4 952373 953475 -398382 - PROTOP_A DNA P 0 1105 1 6 592 5581 59 21 27 chr4 953475 954242 -397615 - DMCR1A LINE CR1 -444 4026 3265 6 592 7574 30 16 0 chr4 954242 955152 -396705 - DMCR1A LINE CR1 -3544 926 2 6 592 7654 45 73 10 chr4 955214 956253 -395604 + PROTOP_A DNA P 1 1105 0 6 592 349 206 48 10 chr4 956563 956666 -395191 + DNAREP1_DM LINE Penelope 487 593 -1 6 592 264 143 14 28 chr4 956828 956900 -394957 + (TA)n Simple_repeat Simple_repeat 1 71 0 6 592 1040 204 77 107 chr4 958264 958895 -392962 - DNAREP1_DM LINE Penelope 0 594 1 6 592 21 36 0 0 chr4 958917 958945 -392912 + AT_rich Low_complexity Low_complexity 1 28 0 6 592 22 35 0 0 chr4 959792 959821 -392036 + AT_rich Low_complexity Low_complexity 1 29 0 6 592 1254 191 168 28 chr4 959821 960219 -391638 + DNAREP1_DM LINE Penelope 4 457 -137 6 592 1217 176 176 53 chr4 960265 960697 -391160 - DNAREP1_DM LINE Penelope -104 490 6 6 592 1345 159 105 9 chr4 961822 962175 -389682 + DNAREP1_DM LINE Penelope 1 342 -252 6 592 29 0 0 0 chr4 962455 962484 -389373 + AT_rich Low_complexity Low_complexity 1 29 0 6 592 381 224 38 95 chr4 962721 962879 -388978 - DMRT1C LINE R1 -565 4878 4730 6 592 23 0 0 0 chr4 963145 963168 -388689 + AT_rich Low_complexity Low_complexity 1 23 0 6 592 982 120 341 2 chr4 965468 965912 -385945 + DNAREP1_DM LINE Penelope 1 594 0 6 592 28 29 0 0 chr4 966623 966658 -385199 + AT_rich Low_complexity Low_complexity 1 35 0 6 592 233 220 0 0 chr4 967496 967546 -384311 + DNAREP1_DM LINE Penelope 2 51 -543 6 592 402 183 0 0 chr4 968259 968330 -383527 - DNAREP1_DM LINE Penelope -160 434 364 6 592 30 27 0 0 chr4 968604 968641 -383216 + AT_rich Low_complexity Low_complexity 1 37 0 6 592 22 35 0 0 chr4 969089 969118 -382739 + AT_rich Low_complexity Low_complexity 1 29 0 6 592 2056 102 110 175 chr4 970404 970984 -380873 + DNAREP1_DM LINE Penelope 1 542 -52 6 592 814 85 8 0 chr4 970984 971102 -380755 - TC1_DM DNA Tc1 0 1666 1548 6 592 3136 38 57 2 chr4 971107 971508 -380349 - TC1_DM DNA Tc1 -446 1220 798 6 592 1036 58 21 21 chr4 971505 971647 -380210 - TC1_DM DNA Tc1 -1089 577 436 6 592 1434 44 0 5 chr4 971639 971823 -380034 - TC1_DM DNA Tc1 -1415 251 69 6 592 1111 102 336 0 chr4 973477 973712 -378145 - DNAREP1_DM LINE Penelope 0 594 281 6 592 241 83 229 0 chr4 973776 973824 -378033 - PROTOP_B DNA P -1094 59 1 6 592 381 82 0 0 chr4 973824 973873 -377984 + PROTOP_B DNA P 1105 1153 0 6 592 728 130 8 15 chr4 975734 975867 -375990 + DNAREP1_DM LINE Penelope 178 309 -285 6 592 7720 32 12 2 chr4 975874 976826 -375031 + PROTOP_A DNA P 145 1105 0 6 592 1024 70 227 53 chr4 976826 977033 -374824 + DNAREP1_DM LINE Penelope 347 589 -5 6 592 27 0 0 0 chr4 978820 978847 -373010 + AT_rich Low_complexity Low_complexity 1 27 0 6 592 21 82 0 0 chr4 979212 979261 -372596 + AT_rich Low_complexity Low_complexity 1 49 0 6 592 55 72 0 0 chr4 979273 979384 -372473 + AT_rich Low_complexity Low_complexity 1 111 0 6 592 21 0 0 0 chr4 979583 979604 -372253 + AT_rich Low_complexity Low_complexity 1 21 0 6 592 24 53 0 0 chr4 979632 979670 -372187 + AT_rich Low_complexity Low_complexity 1 38 0 6 592 36 40 0 0 chr4 979765 979815 -372042 + AT_rich Low_complexity Low_complexity 1 50 0 6 592 4500 102 40 22 chr4 980821 981904 -369953 + PROTOP_B DNA P 1 1152 -1 6 592 416 40 0 0 chr4 981904 981954 -369903 + PROTOP_B DNA P 1104 1153 0 6 592 503 185 92 0 chr4 982035 982154 -369703 - DNAREP1_DM LINE Penelope -19 575 446 6 592 683 163 228 14 chr4 982299 982510 -369347 - DNAREP1_DM LINE Penelope -337 257 2 6 592 25 31 0 0 chr4 982840 982872 -368985 + AT_rich Low_complexity Low_complexity 1 32 0 6 592 1866 74 70 0 chr4 983668 983926 -367931 - DNAREP1_DM LINE Penelope -10 584 309 6 592 899 50 66 0 chr4 983929 984050 -367807 - DNAREP1_DM LINE Penelope -465 129 1 6 592 30 59 0 0 chr4 986280 986331 -365526 + AT_rich Low_complexity Low_complexity 1 51 0 6 592 355 215 161 0 chr4 986345 986438 -365419 - DNAREP1_DM LINE Penelope -104 490 383 6 592 22 0 0 0 chr4 986491 986513 -365344 + AT_rich Low_complexity Low_complexity 1 22 0 6 592 36 23 0 0 chr4 986821 986864 -364993 + AT_rich Low_complexity Low_complexity 1 43 0 6 592 350 164 0 0 chr4 986996 987051 -364806 - DNAREP1_DM LINE Penelope -29 565 511 6 592 27 81 0 0 chr4 987069 987131 -364726 + AT_rich Low_complexity Low_complexity 1 62 0 6 592 182 62 0 30 chr4 987190 987223 -364634 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 6 592 485 216 26 0 chr4 987228 987344 -364513 - DNAREP1_DM LINE Penelope -471 123 5 6 592 25 0 0 0 chr4 987435 987460 -364397 + AT_rich Low_complexity Low_complexity 1 25 0 6 592 519 236 115 62 chr4 987800 988044 -363813 - DNAREP1_DM LINE Penelope -37 557 301 6 592 21 0 0 0 chr4 988979 989000 -362857 + AT_rich Low_complexity Low_complexity 1 21 0 6 592 12034 21 15 1 chr4 989403 990839 -361018 + TC1-2_DM DNA Tc1 1 1455 -189 6 592 624 137 64 8 chr4 990918 991043 -360814 + DM297_LTR LTR Gypsy 275 406 -8 6 592 43 20 0 0 chr4 991064 991114 -360743 + AT_rich Low_complexity Low_complexity 1 50 0 6 592 211 277 10 10 chr4 991240 991342 -360515 + (TTTA)n Simple_repeat Simple_repeat 3 104 0 6 592 321 73 0 0 chr4 991715 991756 -360101 - DNAREP1_DM LINE Penelope -552 42 2 6 592 999 133 23 8 chr4 991839 992098 -359759 + DNAREP1_DM LINE Penelope 2 331 -263 6 592 395 123 0 0 chr4 992092 992149 -359708 + DNAREP1_DM LINE Penelope 509 565 -29 6 592 338 211 33 58 chr4 993235 993356 -358501 + DNAREP1_DM LINE Penelope 34 151 -443 6 592 708 199 251 29 chr4 993354 993633 -358224 + DNAREP1_DM LINE Penelope 254 594 0 6 592 22 56 0 0 chr4 993793 993829 -358028 + AT_rich Low_complexity Low_complexity 1 36 0 6 592 306 167 0 0 chr4 994626 994680 -357177 + DNAREP1_DM LINE Penelope 3 56 -538 6 592 742 163 96 34 chr4 994750 994946 -356911 + DNAREP1_DM LINE Penelope 298 539 -55 6 592 27 29 0 0 chr4 996406 996440 -355417 + AT_rich Low_complexity Low_complexity 1 34 0 6 592 449 179 12 0 chr4 996727 996811 -355046 - DMRP1 Unknown Unknown -216 130 46 6 592 375 232 9 18 chr4 997043 997157 -354700 + DNAREP1_DM LINE Penelope 131 243 -351 6 592 1164 107 29 0 chr4 997211 997417 -354440 + S_DM DNA Tc1 1525 1736 0 6 592 1735 169 154 14 chr4 997888 998322 -353535 + DNAREP1_DM LINE Penelope 117 594 0 6 592 28 48 0 0 chr4 998322 998364 -353493 + AT_rich Low_complexity Low_complexity 1 42 0 6 592 283 243 16 65 chr4 999686 999809 -352048 - DNAREP1_DM LINE Penelope -439 155 39 6 592 772 180 145 21 chr4 999807 1000000 -351857 - DNAREP1_DM LINE Penelope -52 542 326 6 592 1007 198 103 22 chr4 1000020 1000395 -351462 - DNAREP1_DM LINE Penelope -263 331 1 6 592 292 146 0 0 chr4 1000831 1000879 -350978 - DNAREP1_DM LINE Penelope 0 594 547 6 592 2310 160 46 7 chr4 1000897 1001356 -350501 - DNAREP1_DM LINE Penelope -117 477 1 6 592 404 128 209 0 chr4 1002625 1002711 -349146 + DNAREP1_DM LINE Penelope 36 139 -455 6 592 271 0 0 0 chr4 1002749 1002784 -349073 + DNAREP1_DM LINE Penelope 219 253 -341 6 592 1528 127 72 29 chr4 1002780 1003056 -348801 + DNAREP1_DM LINE Penelope 307 594 0 6 592 591 135 11 0 chr4 1004730 1004819 -347038 - DNAREP1_DM LINE Penelope 0 594 505 6 592 180 77 0 0 chr4 1004819 1004845 -347012 + (TA)n Simple_repeat Simple_repeat 1 26 0 6 592 459 127 0 53 chr4 1004845 1004920 -346937 - DNAREP1_DM LINE Penelope -145 449 379 6 592 484 156 0 20 chr4 1004918 1005016 -346841 - DNAREP1_DM LINE Penelope -394 200 105 6 592 283 119 15 15 chr4 1005017 1005085 -346772 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 592 218 213 0 0 chr4 1005102 1005149 -346708 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 592 545 88 25 0 chr4 1005173 1005253 -346604 - DNAREP1_DM LINE Penelope -483 111 30 6 592 315 174 19 115 chr4 1006409 1006513 -345344 - DNAREP1_DM LINE Penelope 0 594 501 6 592 227 167 0 0 chr4 1006794 1006830 -345027 - DNAREP1_DM LINE Penelope -558 36 1 6 592 26 0 0 0 chr4 1006834 1006860 -344997 + AT_rich Low_complexity Low_complexity 1 26 0 6 592 630 266 64 57 chr4 1007745 1008152 -343705 - DNAREP1_DM LINE Penelope -183 411 2 6 592 28 48 0 0 chr4 1008471 1008513 -343344 + AT_rich Low_complexity Low_complexity 1 42 0 6 592 1581 123 133 8 chr4 1008567 1008875 -342982 + DNAREP1_DM LINE Penelope 208 533 -61 6 592 24 32 0 0 chr4 1009628 1009659 -342198 + AT_rich Low_complexity Low_complexity 1 31 0 6 592 833 119 229 0 chr4 1011301 1011519 -340338 - DNAREP1_DM LINE Penelope 0 594 327 6 592 350 127 253 0 chr4 1011631 1011710 -340147 - DNAREP1_DM LINE Penelope -495 99 1 6 592 245 259 188 8 chr4 1012940 1013057 -338800 - DNAREP1_DM LINE Penelope -68 526 389 6 592 244 289 141 0 chr4 1013167 1013288 -338569 - DNAREP1_DM LINE Penelope -68 526 389 6 592 487 172 0 0 chr4 1013377 1013464 -338393 - DNAREP1_DM LINE Penelope -8 586 500 6 592 272 188 94 0 chr4 1013475 1013539 -338318 - DNAREP1_DM LINE Penelope -158 436 367 6 592 653 179 414 42 chr4 1013734 1013973 -337884 - DNAREP1_DM LINE Penelope -4 590 263 6 592 227 167 24 0 chr4 1013982 1014024 -337833 - DNAREP1_DM LINE Penelope -118 476 434 6 592 463 36 0 0 chr4 1014688 1014744 -337113 + DNAREP1_DM LINE Penelope 44 99 -495 6 592 388 108 0 0 chr4 1014744 1014809 -337048 - DNAREP1_DM LINE Penelope -423 171 107 6 592 309 245 0 31 chr4 1014816 1014913 -336944 - DNAREP1_DM LINE Penelope -335 259 166 6 592 539 55 209 11 chr4 1014915 1015006 -336851 - DNAREP1_DM LINE Penelope -485 109 1 6 592 748 94 0 0 chr4 1015472 1015578 -336279 - DNAREP1_DM LINE Penelope -488 106 1 6 592 841 132 270 22 chr4 1016067 1016307 -335550 - DNAREP1_DM LINE Penelope -31 563 129 6 592 235 94 0 0 chr4 1016293 1016325 -335532 - DNAREP1_DM LINE Penelope -355 239 208 6 592 383 152 30 0 chr4 1016602 1016668 -335189 + DNAREP1_DM LINE Penelope 520 587 -7 6 592 24 32 0 0 chr4 1018575 1018606 -333251 + AT_rich Low_complexity Low_complexity 1 31 0 6 592 24 32 0 0 chr4 1019011 1019042 -332815 + AT_rich Low_complexity Low_complexity 1 31 0 6 592 21 0 0 0 chr4 1019653 1019674 -332183 + AT_rich Low_complexity Low_complexity 1 21 0 6 592 2002 96 379 25 chr4 1019710 1020143 -331714 - DNAREP1_DM LINE Penelope -7 587 2 6 592 682 48 341 0 chr4 1020141 1020267 -331590 - DNAREP1_DM LINE Penelope 0 594 426 6 592 5568 63 71 18 chr4 1020263 1021052 -330805 + R1_DM LINE R1 2349 3179 -2177 6 592 2922 49 57 0 chr4 1021051 1021436 -330421 + R1_DM LINE R1 4294 4700 -656 6 592 244 51 179 0 chr4 1021433 1021472 -330385 + R1_DM LINE R1 5311 5356 0 6 592 829 110 156 0 chr4 1021473 1021627 -330230 - DNAREP1_DM LINE Penelope -163 431 254 6 592 1713 126 86 14 chr4 1021626 1022055 -329802 - DNAREP1_DM LINE Penelope -262 332 1 6 592 302 224 153 0 chr4 1022366 1022464 -329393 - DNAREP1_DM LINE Penelope -1 593 481 6 592 353 271 28 5 chr4 1022482 1022621 -329236 + DNAREP1_DM LINE Penelope 435 498 -96 6 592 2027 147 135 79 chr4 1023608 1024163 -327694 + DNAREP1_DM LINE Penelope 1 586 -8 6 592 27 0 0 0 chr4 1024230 1024257 -327600 + AT_rich Low_complexity Low_complexity 1 27 0 6 592 1057 190 60 0 chr4 1024271 1024487 -327370 + DNAREP1_DM LINE Penelope 335 563 -31 6 592 42 57 0 0 chr4 1024648 1024718 -327139 + AT_rich Low_complexity Low_complexity 1 70 0 6 592 1199 132 277 26 chr4 1025259 1025562 -326295 + DNAREP1_DM LINE Penelope 185 563 -31 6 592 1757 127 9 72 chr4 1025606 1025955 -325902 + DNAREP1_DM LINE Penelope 1 327 -267 6 592 728 35 0 0 chr4 1025954 1026041 -325816 + DNAREP1_DM LINE Penelope 508 594 0 6 592 27 62 0 0 chr4 1028040 1028088 -323769 + AT_rich Low_complexity Low_complexity 1 48 0 6 592 792 150 26 57 chr4 1028405 1028621 -323236 + DNAREP1_DM LINE Penelope 1 348 -246 6 592 437 232 21 42 chr4 1029389 1029533 -322324 + DNAREP1_DM LINE Penelope 89 229 -365 6 592 51 42 0 0 chr4 1029575 1029647 -322210 + AT_rich Low_complexity Low_complexity 1 72 0 6 592 22 0 0 0 chr4 1029785 1029807 -322050 + AT_rich Low_complexity Low_complexity 1 22 0 6 592 285 221 39 13 chr4 1031009 1031087 -320770 + DNAREP1_DM LINE Penelope 514 593 -1 6 592 2134 161 116 44 chr4 1031607 1032134 -319723 + DNAREP1_DM LINE Penelope 1 565 -29 6 592 25 0 0 0 chr4 1032772 1032797 -319060 + AT_rich Low_complexity Low_complexity 1 25 0 6 592 23 78 0 0 chr4 1033735 1033786 -318071 + AT_rich Low_complexity Low_complexity 1 51 0 6 592 34 0 0 0 chr4 1034034 1034068 -317789 + AT_rich Low_complexity Low_complexity 1 34 0 6 592 554 249 375 0 chr4 1034529 1034713 -317144 - FB4_DM DNA Tc1 -2730 1359 1107 6 592 213 121 0 0 chr4 1034780 1034813 -317044 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 592 21 71 0 0 chr4 1035989 1036031 -315826 + AT_rich Low_complexity Low_complexity 1 42 0 6 592 22 0 0 0 chr4 1036593 1036615 -315242 + AT_rich Low_complexity Low_complexity 1 22 0 6 592 722 182 184 19 chr4 1040920 1041300 -310557 + DNAREP1_DM LINE Penelope 1 579 -15 6 592 773 180 181 19 chr4 1041324 1041713 -310144 + DNAREP1_DM LINE Penelope 1 588 -6 6 592 881 161 161 0 chr4 1041772 1041964 -309893 + DNAREP1_DM LINE Penelope 345 567 -27 6 592 183 175 0 0 chr4 1041985 1042042 -309815 + A-rich Low_complexity Low_complexity 6 62 0 6 592 1032 96 0 0 chr4 1042047 1042224 -309633 + (TAAAAA)n Simple_repeat Simple_repeat 4 180 0 6 592 360 158 0 0 chr4 1042225 1042320 -309537 + A-rich Low_complexity Low_complexity 84 178 0 6 592 189 240 0 0 chr4 1042339 1042514 -309343 + (TAAA)n Simple_repeat Simple_repeat 4 178 0 6 592 40 0 0 0 chr4 1042514 1042554 -309303 + AT_rich Low_complexity Low_complexity 1 40 0 6 592 737 145 6 0 chr4 1042554 1042733 -309124 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 592 342 0 0 0 chr4 1044331 1044369 -307488 + (TA)n Simple_repeat Simple_repeat 1 38 0 6 592 902 67 111 0 chr4 1044369 1044504 -307353 - DNAREP1_DM LINE Penelope -5 589 440 6 592 5142 123 75 1 chr4 1044505 1045390 -306467 + FB4_DM DNA Tc1 1811 2760 -1329 6 592 1325 103 26 0 chr4 1045392 1045653 -306204 - DNAREP1_DM LINE Penelope -193 401 7 6 592 4418 58 26 21 chr4 1045889 1046505 -305352 + TC1_DM DNA Tc1 1 619 -1047 6 592 22 56 0 0 chr4 1047307 1047343 -304514 + AT_rich Low_complexity Low_complexity 1 36 0 6 592 29 28 0 0 chr4 1047948 1047984 -303873 + AT_rich Low_complexity Low_complexity 1 36 0 6 593 298 202 84 28 chr4 1048831 1048938 -302919 + DNAREP1_DM LINE Penelope 191 303 -291 6 593 23 0 0 0 chr4 1050045 1050068 -301789 + AT_rich Low_complexity Low_complexity 1 23 0 6 593 180 77 0 0 chr4 1050150 1050176 -301681 + (TAATG)n Simple_repeat Simple_repeat 3 28 0 6 593 839 193 66 69 chr4 1051903 1052185 -299672 - DNAREP1_DM LINE Penelope -118 476 64 6 593 39 68 0 0 chr4 1052975 1053049 -298808 + AT_rich Low_complexity Low_complexity 1 74 0 6 593 23 0 0 0 chr4 1055965 1055988 -295869 + AT_rich Low_complexity Low_complexity 1 23 0 6 593 33 25 0 0 chr4 1057562 1057602 -294255 + AT_rich Low_complexity Low_complexity 1 40 0 6 593 241 258 45 0 chr4 1058512 1058578 -293279 - DNAREP1_DM LINE Penelope -7 587 519 6 593 21 89 0 0 chr4 1058875 1058931 -292926 + AT_rich Low_complexity Low_complexity 1 56 0 6 593 32 26 0 0 chr4 1059087 1059126 -292731 + AT_rich Low_complexity Low_complexity 1 39 0 6 593 29 78 0 0 chr4 1059183 1059247 -292610 + AT_rich Low_complexity Low_complexity 1 64 0 6 593 783 141 182 22 chr4 1059302 1059483 -292374 - DNAREP1_DM LINE Penelope -2 592 383 6 593 26 82 0 0 chr4 1059904 1059965 -291892 + AT_rich Low_complexity Low_complexity 1 61 0 6 593 908 199 55 99 chr4 1059965 1060436 -291421 - DNAREP1_DM LINE Penelope -29 565 5 6 593 246 339 30 30 chr4 1061438 1061672 -290185 - POGO DNA Pogo -1550 571 338 6 593 749 196 182 53 chr4 1061829 1062076 -289781 - DNAREP1_DM LINE Penelope 0 594 316 6 593 516 205 95 47 chr4 1062048 1062217 -289640 - DNAREP1_DM LINE Penelope -417 177 1 6 593 36 53 0 0 chr4 1062277 1062334 -289523 + AT_rich Low_complexity Low_complexity 1 57 0 6 593 27 81 0 0 chr4 1062706 1062768 -289089 + AT_rich Low_complexity Low_complexity 1 62 0 6 593 326 130 0 18 chr4 1062795 1062850 -289007 + DNAREP1_DM LINE Penelope 1 54 -540 6 593 1443 163 193 40 chr4 1062885 1063340 -288517 + DNAREP1_DM LINE Penelope 83 526 -68 6 593 708 150 555 0 chr4 1063392 1063590 -288267 + DNAREP1_DM LINE Penelope 241 548 -46 6 593 25 83 0 0 chr4 1064010 1064070 -287787 + AT_rich Low_complexity Low_complexity 1 60 0 6 593 1326 76 292 4 chr4 1064689 1064966 -286891 + DNAREP1_DM LINE Penelope 238 594 0 6 593 22 35 0 0 chr4 1065302 1065331 -286526 + AT_rich Low_complexity Low_complexity 1 29 0 6 593 27 29 0 0 chr4 1065527 1065561 -286296 + AT_rich Low_complexity Low_complexity 1 34 0 6 593 271 60 727 0 chr4 1065987 1066041 -285816 - DNAREP1_DM LINE Penelope 0 594 501 6 593 4355 34 6 0 chr4 1066041 1066575 -285282 + TC1_DM DNA Tc1 1 537 -1129 6 593 5157 49 152 1 chr4 1066572 1067329 -284528 + TC1_DM DNA Tc1 796 1666 0 6 593 387 77 169 0 chr4 1067329 1067390 -284467 - DNAREP1_DM LINE Penelope -110 484 413 6 593 1145 134 167 9 chr4 1067389 1067723 -284134 + DNAREP1_DM LINE Penelope 206 592 -2 6 593 243 271 0 0 chr4 1067752 1067811 -284046 - DNAREP1_DM LINE Penelope -526 68 10 6 593 24 0 0 0 chr4 1068907 1068931 -282926 + AT_rich Low_complexity Low_complexity 1 24 0 6 593 21 82 0 0 chr4 1069277 1069326 -282531 + AT_rich Low_complexity Low_complexity 1 49 0 6 593 28 0 0 0 chr4 1069453 1069481 -282376 + AT_rich Low_complexity Low_complexity 1 28 0 6 593 212 242 32 0 chr4 1069891 1069953 -281904 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 593 2236 82 238 66 chr4 1070354 1070817 -281040 + DNAREP1_DM LINE Penelope 37 579 -15 6 593 21 0 0 0 chr4 1071038 1071059 -280798 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 506 246 0 0 chr4 1072243 1072357 -279500 + DNAREP1_DM LINE Penelope 1 114 -480 6 593 899 139 96 6 chr4 1072418 1072584 -279273 + DNAREP1_DM LINE Penelope 384 564 -30 6 593 202 200 0 0 chr4 1073354 1073389 -278468 + (TATG)n Simple_repeat Simple_repeat 2 36 0 6 593 21 0 0 0 chr4 1073633 1073654 -278203 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 311 309 7 13 chr4 1073955 1074106 -277751 + (TA)n Simple_repeat Simple_repeat 2 151 0 6 593 43 20 0 0 chr4 1074671 1074721 -277136 + AT_rich Low_complexity Low_complexity 1 50 0 6 593 411 230 0 11 chr4 1074845 1074933 -276924 - DNAREP1_DM LINE Penelope -151 443 357 6 593 1001 111 40 0 chr4 1075198 1075397 -276460 - S_DM DNA Tc1 0 1736 1530 6 593 29 0 0 0 chr4 1075684 1075713 -276144 + AT_rich Low_complexity Low_complexity 1 29 0 6 593 21 71 0 0 chr4 1077725 1077767 -274090 + AT_rich Low_complexity Low_complexity 1 42 0 6 593 21 36 0 0 chr4 1077981 1078009 -273848 + AT_rich Low_complexity Low_complexity 1 28 0 6 593 36 23 0 0 chr4 1079133 1079176 -272681 + AT_rich Low_complexity Low_complexity 1 43 0 6 593 368 218 141 31 chr4 1079232 1079360 -272497 - DNAREP1_DM LINE Penelope -20 574 433 6 593 29 47 0 0 chr4 1079984 1080027 -271830 + AT_rich Low_complexity Low_complexity 1 43 0 6 593 26 64 0 0 chr4 1081402 1081449 -270408 + AT_rich Low_complexity Low_complexity 1 47 0 6 593 902 198 107 45 chr4 1082114 1082405 -269452 - DNAREP1_DM LINE Penelope -150 444 136 6 593 351 270 41 47 chr4 1082444 1082615 -269242 - DNAREP1_DM LINE Penelope -410 184 15 6 593 198 103 0 0 chr4 1084085 1084114 -267743 + (TATG)n Simple_repeat Simple_repeat 3 31 0 6 593 1451 86 0 5 chr4 1084229 1084450 -267407 - S_DM DNA Tc1 0 1736 1517 6 593 414 202 43 0 chr4 1084803 1084897 -266960 - DNAREP1_DM LINE Penelope -62 532 435 6 593 400 194 147 13 chr4 1084893 1085079 -266778 - DNAREP1_DM LINE Penelope -299 295 117 6 593 204 159 0 22 chr4 1085187 1085232 -266625 + T-rich Low_complexity Low_complexity 2 45 0 6 593 1097 104 151 9 chr4 1096943 1097281 -254576 - FB4_DM DNA Tc1 -1386 2703 2318 6 593 907 99 247 0 chr4 1097295 1097457 -254400 - FB4_DM DNA Tc1 -1966 2123 1922 6 593 1042 122 6 0 chr4 1097455 1097619 -254238 - FB4_DM DNA Tc1 -2818 1271 1107 6 593 22 35 0 0 chr4 1098140 1098169 -253688 + AT_rich Low_complexity Low_complexity 1 29 0 6 593 265 245 291 39 chr4 1099717 1099903 -251954 - DNAREP1_DM LINE Penelope -148 446 214 6 593 201 100 100 0 chr4 1100009 1100069 -251788 + (TATAG)n Simple_repeat Simple_repeat 5 70 0 6 593 1526 128 146 67 chr4 1100069 1100514 -251343 - DNAREP1_DM LINE Penelope -46 548 117 6 593 939 209 15 27 chr4 1100494 1100754 -251103 - DNAREP1_DM LINE Penelope -296 298 42 6 593 21 36 0 0 chr4 1100754 1100782 -251075 + AT_rich Low_complexity Low_complexity 1 28 0 6 593 263 61 0 0 chr4 1100782 1100815 -251042 - DNAREP1_DM LINE Penelope -541 53 21 6 593 23 0 0 0 chr4 1102189 1102212 -249645 + AT_rich Low_complexity Low_complexity 1 23 0 6 593 458 210 0 0 chr4 1104034 1104134 -247723 + DNAREP1_DM LINE Penelope 72 171 -423 6 593 3511 28 55 0 chr4 1104171 1104606 -247251 + Mariner2_DM DNA Tc1 454 912 0 6 593 501 161 11 0 chr4 1104607 1104700 -247157 + DNAREP1_DM LINE Penelope 500 593 -1 6 593 22 0 0 0 chr4 1105774 1105796 -246061 + AT_rich Low_complexity Low_complexity 1 22 0 6 593 494 114 13 0 chr4 1105801 1105880 -245977 + DNAREP1_DM LINE Penelope 56 135 -459 6 593 1329 127 133 132 chr4 1105896 1106521 -245336 + DNAREP1_DM LINE Penelope 89 552 -42 6 593 232 309 31 41 chr4 1106880 1106978 -244879 + DNAREP1_DM LINE Penelope 367 463 -131 6 593 203 232 36 0 chr4 1107416 1107472 -244385 + (CATA)n Simple_repeat Simple_repeat 3 60 0 6 593 22 35 0 0 chr4 1107597 1107626 -244231 + AT_rich Low_complexity Low_complexity 1 29 0 6 593 893 86 151 0 chr4 1107897 1108036 -243821 - DNAREP1_DM LINE Penelope 0 594 435 6 593 331 136 167 0 chr4 1109001 1109067 -242790 + DNAREP1_DM LINE Penelope 518 594 0 6 593 64 0 0 0 chr4 1110097 1110161 -241696 + AT_rich Low_complexity Low_complexity 1 64 0 6 593 1955 129 143 58 chr4 1110263 1110815 -241042 - DNAREP1_DM LINE Penelope -3 591 117 6 593 436 68 0 0 chr4 1110841 1110900 -240957 - DNAREP1_DM LINE Penelope -535 59 1 6 593 382 127 0 0 chr4 1111084 1111139 -240718 - DNAREP1_DM LINE Penelope -533 61 7 6 593 655 189 26 19 chr4 1111428 1111584 -240273 + DNAREP1_DM LINE Penelope 3 159 -435 6 593 1808 97 164 3 chr4 1111595 1111906 -239951 + DNAREP1_DM LINE Penelope 234 594 0 6 593 657 156 258 11 chr4 1111923 1112105 -239752 - DNAREP1_DM LINE Penelope -6 588 362 6 593 354 172 0 0 chr4 1112130 1112188 -239669 - DNAREP1_DM LINE Penelope -525 69 12 6 593 234 146 0 24 chr4 1112632 1112674 -239183 - DNAREP1_DM LINE Penelope -550 44 4 6 593 21 57 0 0 chr4 1113521 1113556 -238301 + AT_rich Low_complexity Low_complexity 1 35 0 6 593 552 203 92 21 chr4 1114226 1114367 -237490 - DNAREP1_DM LINE Penelope -443 151 1 6 593 758 138 29 7 chr4 1114337 1114476 -237381 - DNAREP1_DM LINE Penelope -444 150 9 6 593 561 237 76 80 chr4 1114960 1115222 -236635 - DNAREP1_DM LINE Penelope -333 261 1 6 593 783 203 61 114 chr4 1115339 1115567 -236290 - DNAREP1_DM LINE Penelope -20 574 359 6 593 2150 132 110 123 chr4 1115565 1116118 -235739 - DNAREP1_DM LINE Penelope -48 546 1 6 593 230 177 78 68 chr4 1117415 1117518 -234339 + DNAREP1_DM LINE Penelope 50 153 -441 6 593 343 227 98 25 chr4 1117569 1117691 -234166 + DNAREP1_DM LINE Penelope 117 247 -347 6 593 321 132 19 0 chr4 1117707 1117760 -234097 - PROTOP_B DNA P -1095 58 5 6 593 21 82 0 0 chr4 1119593 1119642 -232215 + AT_rich Low_complexity Low_complexity 1 49 0 6 593 698 157 283 5 chr4 1119899 1120097 -231760 - DNAREP1_DM LINE Penelope -1 593 341 6 593 443 195 31 31 chr4 1120511 1120638 -231219 + DNAREP1_DM LINE Penelope 2 128 -466 6 593 437 246 0 0 chr4 1120743 1120853 -231004 + DNAREP1_DM LINE Penelope 2 111 -483 6 593 233 143 214 0 chr4 1120923 1120993 -230864 + DNAREP1_DM LINE Penelope 469 553 -41 6 593 270 191 47 16 chr4 1121177 1121241 -230616 - DNAREP1_DM LINE Penelope -486 108 43 6 593 36 40 0 0 chr4 1121620 1121670 -230187 + AT_rich Low_complexity Low_complexity 1 50 0 6 593 586 175 30 115 chr4 1121879 1122079 -229778 + DNAREP1_DM LINE Penelope 80 262 -332 6 593 647 75 0 41 chr4 1122071 1122168 -229689 + DNAREP1_DM LINE Penelope 499 591 -3 6 593 301 188 200 0 chr4 1122212 1122297 -229560 - DNAREP1_DM LINE Penelope -172 422 321 6 593 22 0 0 0 chr4 1122365 1122387 -229470 + AT_rich Low_complexity Low_complexity 1 22 0 6 593 235 118 0 0 chr4 1122414 1122448 -229409 - DNAREP1_DM LINE Penelope -560 34 1 6 593 180 0 0 0 chr4 1122458 1122478 -229379 + (TTAAG)n Simple_repeat Simple_repeat 5 24 0 6 593 373 217 147 0 chr4 1122811 1122940 -228917 - DNAREP1_DM LINE Penelope -33 561 414 6 593 312 203 14 0 chr4 1122998 1123067 -228790 + DNAREP1_DM LINE Penelope 524 593 -1 6 593 30 59 0 0 chr4 1123136 1123187 -228670 + AT_rich Low_complexity Low_complexity 1 51 0 6 593 579 106 9 37 chr4 1123266 1123374 -228483 + DNAREP1_DM LINE Penelope 186 290 -304 6 593 1035 97 97 0 chr4 1123373 1123528 -228329 + DNAREP1_DM LINE Penelope 425 594 0 6 593 318 241 28 0 chr4 1123811 1123883 -227974 + DNAREP1_DM LINE Penelope 432 497 -97 6 593 230 175 0 0 chr4 1123967 1124007 -227850 - DNAREP1_DM LINE Penelope -51 543 504 6 593 499 191 44 26 chr4 1124013 1124126 -227731 - DNAREP1_DM LINE Penelope -479 115 1 6 593 22 0 0 0 chr4 1125189 1125211 -226646 + AT_rich Low_complexity Low_complexity 1 22 0 6 593 411 182 144 9 chr4 1126437 1126548 -225309 - DNAREP1_DM LINE Penelope -28 566 441 6 593 210 238 0 0 chr4 1127142 1127184 -224673 + (CAA)n Simple_repeat Simple_repeat 3 44 0 6 593 229 226 238 0 chr4 1128459 1128543 -223314 - PENELOPE LINE Penelope -121 4040 3937 6 593 237 203 40 13 chr4 1129005 1129080 -222777 + T-rich Low_complexity Low_complexity 3 79 0 6 593 235 35 0 0 chr4 1130369 1130398 -221459 + DNAREP1_DM LINE Penelope 34 62 -532 6 593 47 92 0 0 chr4 1131241 1131372 -220485 + AT_rich Low_complexity Low_complexity 1 131 0 6 593 28 61 0 0 chr4 1132691 1132740 -219117 + AT_rich Low_complexity Low_complexity 1 49 0 6 593 21 0 0 0 chr4 1133305 1133326 -218531 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 31 0 0 0 chr4 1133381 1133412 -218445 + AT_rich Low_complexity Low_complexity 1 31 0 6 593 255 154 19 19 chr4 1134778 1134831 -217026 - DMRP1 Unknown Unknown -283 63 11 6 593 3034 106 66 6 chr4 1135064 1135549 -216308 + DNAREP1_DM LINE Penelope 81 594 0 6 593 28 0 0 0 chr4 1136547 1136575 -215282 + AT_rich Low_complexity Low_complexity 1 28 0 6 593 23 54 0 0 chr4 1137090 1137127 -214730 + AT_rich Low_complexity Low_complexity 1 37 0 6 593 25 31 0 0 chr4 1137238 1137270 -214587 + AT_rich Low_complexity Low_complexity 1 32 0 6 593 21 36 0 0 chr4 1139272 1139300 -212557 + AT_rich Low_complexity Low_complexity 1 28 0 6 593 555 200 227 0 chr4 1139905 1140090 -211767 - DNAREP1_DM LINE Penelope -97 497 271 6 593 271 89 36 0 chr4 1140101 1140157 -211700 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 6 593 3139 112 112 7 chr4 1141495 1142033 -209824 + DNAREP1_DM LINE Penelope 1 594 0 6 593 23 0 0 0 chr4 1142499 1142522 -209335 + AT_rich Low_complexity Low_complexity 1 23 0 6 593 23 0 0 0 chr4 1142857 1142880 -208977 + AT_rich Low_complexity Low_complexity 1 23 0 6 593 815 169 134 0 chr4 1145998 1146170 -205687 - DNAREP1_DM LINE Penelope -32 562 368 6 593 262 221 151 0 chr4 1146170 1146256 -205601 - DNAREP1_DM LINE Penelope -157 437 339 6 593 21 0 0 0 chr4 1146256 1146277 -205580 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 1742 139 46 47 chr4 1146417 1146783 -205074 + DNAREP1_DM LINE Penelope 118 464 -130 6 593 387 239 215 7 chr4 1146807 1146942 -204915 + DNAREP1_DM LINE Penelope 302 464 -130 6 593 654 49 0 24 chr4 1146943 1147027 -204830 + DNAREP1_DM LINE Penelope 513 594 0 6 593 32 26 0 0 chr4 1147290 1147329 -204528 + AT_rich Low_complexity Low_complexity 1 39 0 6 593 1941 115 76 2 chr4 1148274 1148704 -203153 - DNAREP1_DM LINE Penelope -2 592 2 6 593 227 54 27 0 chr4 1148788 1148825 -203032 + (TAAAAA)n Simple_repeat Simple_repeat 4 41 0 6 593 24 0 0 0 chr4 1148825 1148849 -203008 + AT_rich Low_complexity Low_complexity 1 24 0 6 593 996 170 130 99 chr4 1149572 1150037 -201820 + DNAREP1_DM LINE Penelope 1 594 0 6 593 54 49 0 0 chr4 1150814 1150896 -200961 + AT_rich Low_complexity Low_complexity 1 82 0 6 593 579 106 324 0 chr4 1151246 1151388 -200469 - DNAREP1_DM LINE Penelope 0 594 407 6 593 412 133 11 22 chr4 1151390 1151482 -200375 - DNAREP1_DM LINE Penelope -305 289 199 6 593 277 182 0 43 chr4 1151489 1151558 -200299 + DNAREP1_DM LINE Penelope 529 594 0 6 593 29 28 0 0 chr4 1152613 1152649 -199208 + AT_rich Low_complexity Low_complexity 1 36 0 6 593 25 0 0 0 chr4 1153347 1153372 -198485 + AT_rich Low_complexity Low_complexity 1 25 0 6 593 21 0 0 0 chr4 1153534 1153555 -198302 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 505 243 103 22 chr4 1153849 1154034 -197823 + DNAREP1_DM LINE Penelope 395 594 0 6 593 663 109 256 0 chr4 1154223 1154360 -197497 + DNAREP1_DM LINE Penelope 422 593 -1 6 593 405 130 13 0 chr4 1155042 1155119 -196738 - DNAREP1_DM LINE Penelope -381 213 136 6 593 228 186 0 0 chr4 1155116 1155159 -196698 - DNAREP1_DM LINE Penelope -119 475 433 6 593 1269 166 15 19 chr4 1155333 1155603 -196254 + DNAREP1_DM LINE Penelope 31 299 -295 6 593 25 31 0 0 chr4 1156111 1156143 -195714 + AT_rich Low_complexity Low_complexity 1 32 0 6 593 24 77 0 0 chr4 1156510 1156562 -195295 + AT_rich Low_complexity Low_complexity 1 52 0 6 593 306 186 40 54 chr4 1156633 1156707 -195150 - DNAREP1_DM LINE Penelope -262 332 260 6 593 781 126 182 0 chr4 1157882 1158041 -193816 + DNAREP1_DM LINE Penelope 114 301 -293 6 593 524 185 126 0 chr4 1158039 1158158 -193699 + DNAREP1_DM LINE Penelope 441 574 -20 6 593 21 0 0 0 chr4 1158540 1158561 -193296 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 23 33 0 0 chr4 1158874 1158904 -192953 + AT_rich Low_complexity Low_complexity 1 30 0 6 593 27 49 0 0 chr4 1160203 1160244 -191613 + AT_rich Low_complexity Low_complexity 1 41 0 6 593 257 268 124 0 chr4 1160911 1161008 -190849 + DNAREP1_DM LINE Penelope 481 589 -5 6 593 22 0 0 0 chr4 1162033 1162055 -189802 + AT_rich Low_complexity Low_complexity 1 22 0 6 593 27 29 0 0 chr4 1162850 1162884 -188973 + AT_rich Low_complexity Low_complexity 1 34 0 6 593 22 0 0 0 chr4 1163006 1163028 -188829 + AT_rich Low_complexity Low_complexity 1 22 0 6 593 239 229 0 0 chr4 1163331 1163379 -188478 + FW_DM LINE Jockey 178 225 -4467 6 593 365 198 42 42 chr4 1163537 1163632 -188225 + FW3_DM LINE Jockey 350 444 -2688 6 593 701 224 261 0 chr4 1163634 1163876 -187981 + FW3_DM LINE Jockey 751 1056 -2076 6 593 22 0 0 0 chr4 1163929 1163951 -187906 + AT_rich Low_complexity Low_complexity 1 22 0 6 593 184 77 51 0 chr4 1164521 1164560 -187297 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 593 28 0 0 0 chr4 1164762 1164790 -187067 + AT_rich Low_complexity Low_complexity 1 28 0 6 593 21 0 0 0 chr4 1164822 1164843 -187014 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 212 175 0 0 chr4 1166066 1166106 -185751 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 593 894 122 0 0 chr4 1166106 1166286 -185571 + (TAAA)n Simple_repeat Simple_repeat 1 180 0 6 593 909 125 0 0 chr4 1166256 1166618 -185239 + (TA)n Simple_repeat Simple_repeat 1 362 0 6 593 224 210 32 0 chr4 1166861 1166923 -184934 + A-rich Low_complexity Low_complexity 1 64 0 6 593 24 67 0 0 chr4 1167000 1167045 -184812 + AT_rich Low_complexity Low_complexity 1 45 0 6 593 1066 112 67 4 chr4 1168717 1168953 -182904 + DNAREP1_DM LINE Penelope 1 293 -301 6 593 318 126 7 243 chr4 1168937 1169073 -182784 + DNAREP1_DM LINE Penelope 188 291 -303 6 593 859 115 13 13 chr4 1169075 1169233 -182624 - DNAREP1_DM LINE Penelope -302 292 135 6 593 27 0 0 0 chr4 1169558 1169585 -182272 + AT_rich Low_complexity Low_complexity 1 27 0 6 593 1507 178 30 27 chr4 1170166 1170501 -181356 + Gypsy2_LTR LTR Gypsy 1 336 -17 6 593 246 32 0 0 chr4 1171050 1171081 -180776 - DMCR1A LINE CR1 -304 4166 4136 6 593 1477 93 263 0 chr4 1171079 1171345 -180512 - DMCR1A LINE CR1 -616 3854 3519 6 593 804 83 116 0 chr4 1171395 1171516 -180341 - DMCR1A LINE CR1 -2808 1662 1528 6 593 36 40 0 0 chr4 1171551 1171601 -180256 + AT_rich Low_complexity Low_complexity 1 50 0 6 593 27 87 0 0 chr4 1171830 1171899 -179958 + AT_rich Low_complexity Low_complexity 1 69 0 6 593 24 0 0 0 chr4 1172489 1172513 -179344 + AT_rich Low_complexity Low_complexity 1 24 0 6 593 26 0 0 0 chr4 1173216 1173242 -178615 + AT_rich Low_complexity Low_complexity 1 26 0 6 593 16732 34 4 3 chr4 1173773 1175803 -176054 - DOC3_DM LINE Jockey -1818 2922 891 6 593 4124 38 96 14 chr4 1175801 1176365 -175492 - DOC3_DM LINE Jockey -4128 612 3 6 593 31 44 0 0 chr4 1176815 1176860 -174997 + AT_rich Low_complexity Low_complexity 1 45 0 6 593 26 64 0 0 chr4 1177123 1177170 -174687 + AT_rich Low_complexity Low_complexity 1 47 0 6 593 22 0 0 0 chr4 1177305 1177327 -174530 + AT_rich Low_complexity Low_complexity 1 22 0 6 593 21 36 0 0 chr4 1177492 1177520 -174337 + AT_rich Low_complexity Low_complexity 1 28 0 6 593 249 179 18 18 chr4 1177694 1177751 -174106 - BURDOCK_I LTR Gypsy 0 5860 5804 6 593 22 70 0 0 chr4 1177927 1177970 -173887 + AT_rich Low_complexity Low_complexity 1 43 0 6 74 7717 229 95 29 chr4 1178335 1182403 -169454 - BURDOCK_I LTR Gypsy -297 4687 132 6 594 228 230 60 108 chr4 1182696 1182779 -169078 - BURDOCK_LTR LTR Gypsy -64 211 133 6 594 5485 54 19 6 chr4 1182809 1183530 -168327 - TC1_DM DNA Tc1 0 1666 936 6 594 5790 39 23 3 chr4 1183510 1184239 -167618 - TC1_DM DNA Tc1 -922 744 1 6 594 47 0 0 0 chr4 1184979 1185026 -166831 + AT_rich Low_complexity Low_complexity 1 47 0 6 594 1402 33 11 6 chr4 1185072 1185255 -166602 - TC1_DM DNA Tc1 -1482 184 1 6 594 53 17 0 0 chr4 1186114 1186174 -165683 + AT_rich Low_complexity Low_complexity 1 60 0 6 594 25 31 0 0 chr4 1187498 1187530 -164327 + AT_rich Low_complexity Low_complexity 1 32 0 6 594 348 169 201 108 chr4 1187574 1187713 -164144 - DNAREP1_DM LINE Penelope -29 565 414 6 594 347 207 59 17 chr4 1188028 1188146 -163711 + DNAREP1_DM LINE Penelope 184 306 -288 6 594 243 123 106 15 chr4 1188145 1188211 -163646 + DNAREP1_DM LINE Penelope 225 296 -298 6 594 8432 41 6 30 chr4 1188397 1189529 -162328 + PROTOP_A DNA P 1 1105 0 6 594 42 82 0 0 chr4 1189693 1189791 -162066 + AT_rich Low_complexity Low_complexity 1 98 0 6 594 631 209 11 73 chr4 1190178 1190369 -161488 + DNAREP1_DM LINE Penelope 1 179 -415 6 594 3592 17 127 0 chr4 1191735 1192475 -159382 - DMCR1A LINE CR1 -51 4419 3586 6 594 24 32 0 0 chr4 1193371 1193402 -158455 + AT_rich Low_complexity Low_complexity 1 31 0 6 594 21 0 0 0 chr4 1193429 1193450 -158407 + AT_rich Low_complexity Low_complexity 1 21 0 6 594 550 179 241 1 chr4 1194026 1194199 -157658 + DNAREP1_DM LINE Penelope 24 362 -232 6 594 257 150 0 0 chr4 1196011 1196051 -155806 + DMCR1A LINE CR1 3865 3904 -566 6 594 3796 71 76 24 chr4 1196048 1196637 -155220 - Jockey2 LINE Jockey 0 3428 2809 6 594 2781 65 14 0 chr4 1196636 1196990 -154867 - Jockey2 LINE Jockey -765 2663 2305 6 594 1828 49 0 4 chr4 1196982 1197198 -154659 - Jockey2 LINE Jockey -1278 2150 1936 6 594 4501 14 77 0 chr4 1197198 1198210 -153647 - PROTOP_A DNA P 0 1105 16 6 594 9096 31 50 2 chr4 1198216 1199475 -152382 - Jockey2 LINE Jockey -2108 1320 1 6 594 1892 144 142 10 chr4 1199494 1199908 -151949 + DMCR1A LINE CR1 3895 4363 -107 6 594 306 131 0 16 chr4 1199910 1199972 -151885 - FB4_DM DNA Tc1 -2650 1439 1379 6 594 339 140 88 0 chr4 1200323 1200380 -151477 + DNAREP1_DM LINE Penelope 1 62 -532 6 594 809 157 161 5 chr4 1200415 1200607 -151250 + DNAREP1_DM LINE Penelope 362 583 -11 6 594 569 186 252 19 chr4 1201315 1201474 -150383 + DNAREP1_DM LINE Penelope 289 484 -110 6 594 458 45 106 0 chr4 1201481 1201547 -150310 + DNAREP1_DM LINE Penelope 522 594 0 6 594 578 130 0 32 chr4 1203516 1203611 -148246 + PROTOP_B DNA P 1062 1153 0 6 594 25 83 0 0 chr4 1203697 1203757 -148100 + AT_rich Low_complexity Low_complexity 1 60 0 6 594 607 136 71 8 chr4 1203910 1204036 -147821 - DM297_LTR LTR Gypsy 0 414 281 6 594 2642 169 157 11 chr4 1204341 1204989 -146868 + DMCR1A LINE CR1 3484 4226 -244 6 594 553 204 19 0 chr4 1205070 1205178 -146679 + DMCR1A LINE CR1 4361 4470 0 6 594 21 0 0 0 chr4 1205320 1205341 -146516 + AT_rich Low_complexity Low_complexity 1 21 0 6 594 228 118 78 0 chr4 1205484 1205535 -146322 + T-rich Low_complexity Low_complexity 1 55 0 6 594 1150 114 178 107 chr4 1205541 1205955 -145902 + DNAREP1_DM LINE Penelope 30 591 -3 6 594 22 0 0 0 chr4 1207073 1207095 -144762 + AT_rich Low_complexity Low_complexity 1 22 0 6 594 195 184 0 0 chr4 1207293 1207331 -144526 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 594 24 0 0 0 chr4 1207336 1207360 -144497 + AT_rich Low_complexity Low_complexity 1 24 0 6 594 1042 163 50 0 chr4 1207484 1207686 -144171 - DNAREP1_DM LINE Penelope -102 492 281 6 594 23 0 0 0 chr4 1208516 1208539 -143318 + AT_rich Low_complexity Low_complexity 1 23 0 6 594 22 56 0 0 chr4 1209117 1209153 -142704 + AT_rich Low_complexity Low_complexity 1 36 0 6 594 22 56 0 0 chr4 1209642 1209678 -142179 + AT_rich Low_complexity Low_complexity 1 36 0 6 594 21 0 0 0 chr4 1211211 1211232 -140625 + AT_rich Low_complexity Low_complexity 1 21 0 6 594 310 103 121 0 chr4 1211323 1211381 -140476 - DNAREP1_DM LINE Penelope 0 594 530 6 594 2375 125 53 50 chr4 1211418 1211943 -139914 - DNAREP1_DM LINE Penelope -53 541 91 6 594 636 131 535 14 chr4 1211966 1212178 -139679 - DNAREP1_DM LINE Penelope -1 593 271 6 594 23 0 0 0 chr4 1212216 1212239 -139618 + AT_rich Low_complexity Low_complexity 1 23 0 6 594 69 41 0 0 chr4 1213606 1213703 -138154 + AT_rich Low_complexity Low_complexity 1 97 0 6 594 23 0 0 0 chr4 1214309 1214332 -137525 + AT_rich Low_complexity Low_complexity 1 23 0 6 594 29 0 0 0 chr4 1214529 1214558 -137299 + AT_rich Low_complexity Low_complexity 1 29 0 6 594 2828 73 62 24 chr4 1214907 1215327 -136530 - PROTOP_B DNA P -717 436 1 6 594 1043 76 90 0 chr4 1215357 1215502 -136355 - PROTOP_B DNA P -995 158 1 6 594 504 252 204 54 chr4 1215502 1216001 -135856 - DNAREP1_DM LINE Penelope -20 574 1 6 594 23 33 0 0 chr4 1217835 1217865 -133992 + AT_rich Low_complexity Low_complexity 1 30 0 6 594 21 36 0 0 chr4 1218516 1218544 -133313 + AT_rich Low_complexity Low_complexity 1 28 0 6 594 39 80 0 0 chr4 1219047 1219135 -132722 + AT_rich Low_complexity Low_complexity 1 88 0 6 594 192 40 0 0 chr4 1220313 1220338 -131519 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6 594 248 204 61 6 chr4 1220338 1220501 -131356 + (TATAA)n Simple_repeat Simple_repeat 4 175 0 6 594 185 0 0 0 chr4 1220501 1220686 -131171 + AT_rich Low_complexity Low_complexity 1 185 0 6 594 240 141 131 0 chr4 1220686 1220785 -131072 + (CAAT)n Simple_repeat Simple_repeat 3 114 0 6 594 187 5 0 0 chr4 1220785 1220979 -130878 + AT_rich Low_complexity Low_complexity 1 194 0 6 594 300 0 0 0 chr4 1220843 1221143 -130714 + AT_rich Low_complexity Low_complexity 1 300 0 6 594 240 141 131 0 chr4 1221143 1221242 -130615 + (CAAT)n Simple_repeat Simple_repeat 3 114 0 6 594 46 0 0 0 chr4 1221242 1221288 -130569 + AT_rich Low_complexity Low_complexity 1 46 0 6 594 200 28 0 0 chr4 1221388 1221637 -130220 + AT_rich Low_complexity Low_complexity 1 249 0 6 594 300 0 0 0 chr4 1221455 1221755 -130102 + AT_rich Low_complexity Low_complexity 1 300 0 6 594 300 0 0 0 chr4 1221755 1222055 -129802 + AT_rich Low_complexity Low_complexity 1 300 0 6 594 320 87 93 13 chr4 1222060 1222211 -129646 + (TA)n Simple_repeat Simple_repeat 2 164 0 6 594 293 144 136 0 chr4 1222221 1222346 -129511 + (TTATA)n Simple_repeat Simple_repeat 5 146 0 6 594 25 31 0 0 chr4 1222526 1222558 -129299 + AT_rich Low_complexity Low_complexity 1 32 0 6 594 23 33 0 0 chr4 1223768 1223798 -128059 + AT_rich Low_complexity Low_complexity 1 30 0 6 594 651 97 21 0 chr4 1224773 1224866 -126991 - DNAREP1_DM LINE Penelope -147 447 353 6 594 214 162 28 42 chr4 1224913 1224984 -126873 + (TTTAA)n Simple_repeat Simple_repeat 2 71 0 6 594 24 0 0 0 chr4 1227211 1227235 -124622 + AT_rich Low_complexity Low_complexity 1 24 0 6 594 225 0 0 0 chr4 1227462 1227487 -124370 + (A)n Simple_repeat Simple_repeat 1 25 0 6 594 23 0 0 0 chr4 1227808 1227831 -124026 + AT_rich Low_complexity Low_complexity 1 23 0 6 594 1849 182 31 18 chr4 1228238 1228698 -123159 + DNAREP1_DM LINE Penelope 117 503 -91 6 594 435 300 20 44 chr4 1231392 1231643 -120214 + DMCR1A LINE CR1 329 573 -3897 6 594 2171 145 111 24 chr4 1231733 1232186 -119671 + DNAREP1_DM LINE Penelope 1 486 -108 6 594 237 91 45 0 chr4 1232184 1232228 -119629 + DNAREP1_DM LINE Penelope 542 587 -7 6 594 23 0 0 0 chr4 1233242 1233265 -118592 + AT_rich Low_complexity Low_complexity 1 23 0 6 594 24 0 0 0 chr4 1234147 1234171 -117686 + AT_rich Low_complexity Low_complexity 1 24 0 6 594 407 94 85 8 chr4 1236272 1236367 -115490 - DNAREP1_DM LINE Penelope -255 339 212 6 594 476 116 163 0 chr4 1236364 1236450 -115407 - DNAREP1_DM LINE Penelope -206 388 289 6 594 630 136 88 54 chr4 1236650 1236798 -115059 + DNAREP1_DM LINE Penelope 100 252 -342 6 594 35 41 0 0 chr4 1237322 1237371 -114486 + AT_rich Low_complexity Low_complexity 1 49 0 6 594 446 178 44 0 chr4 1237551 1237641 -114216 + DNAREP1_DM LINE Penelope 1 94 -500 6 594 941 132 92 0 chr4 1237801 1237953 -113904 - DNAREP1_DM LINE Penelope -2 592 427 6 594 417 256 216 0 chr4 1237998 1238179 -113678 - DNAREP1_DM LINE Penelope -363 231 12 6 594 28 0 0 0 chr4 1238197 1238225 -113632 + AT_rich Low_complexity Low_complexity 1 28 0 6 594 242 113 127 36 chr4 1238728 1238783 -113074 - DNAREP1_DM LINE Penelope -4 590 531 6 594 1026 104 0 0 chr4 1238783 1239797 -112060 + (TAA)n Simple_repeat Simple_repeat 1 1014 0 6 594 29 0 0 0 chr4 1239821 1239850 -112007 + AT_rich Low_complexity Low_complexity 1 29 0 6 594 1008 111 0 0 chr4 1239983 1240487 -111370 + (TAA)n Simple_repeat Simple_repeat 1 504 0 6 594 29 0 0 0 chr4 1240489 1240518 -111339 + AT_rich Low_complexity Low_complexity 1 29 0 6 594 975 108 0 0 chr4 1240651 1241221 -110636 + (TAA)n Simple_repeat Simple_repeat 1 570 0 6 594 28 0 0 0 chr4 1241223 1241251 -110606 + AT_rich Low_complexity Low_complexity 1 28 0 6 594 975 112 0 0 chr4 1241384 1241816 -110041 + (TAA)n Simple_repeat Simple_repeat 1 432 0 6 594 28 0 0 0 chr4 1241818 1241846 -110011 + AT_rich Low_complexity Low_complexity 1 28 0 6 594 1768 94 22 63 chr4 1241947 1242266 -109591 - DM297_LTR LTR Gypsy -104 310 5 6 594 3025 89 15 0 chr4 1242270 1242731 -109126 - DM297_I LTR Gypsy 0 6167 5700 6 594 779 87 125 15 chr4 1242732 1242877 -108980 - DM297_I LTR Gypsy -818 5349 5205 6 594 2282 87 120 0 chr4 1242869 1243343 -108514 - DM297_I LTR Gypsy -4195 1972 1442 6 594 4511 74 97 42 chr4 1243332 1244464 -107393 - DM297_I LTR Gypsy -4959 1208 15 6 594 1823 132 58 31 chr4 1244462 1244822 -107035 - DM297_LTR LTR Gypsy -42 372 3 6 594 640 104 132 0 chr4 1244847 1244953 -106904 - DNAREP1_DM LINE Penelope -29 565 446 6 594 954 178 101 43 chr4 1244973 1245249 -106608 - DNAREP1_DM LINE Penelope -203 391 100 6 594 470 184 29 39 chr4 1246743 1246845 -105012 + DNAREP1_DM LINE Penelope 398 498 -96 6 594 27 29 0 0 chr4 1247157 1247191 -104666 + AT_rich Low_complexity Low_complexity 1 34 0 6 594 22 0 0 0 chr4 1247716 1247738 -104119 + AT_rich Low_complexity Low_complexity 1 22 0 6 594 442 252 125 6 chr4 1248312 1248472 -103385 - DNAREP1_DM LINE Penelope -140 454 276 6 594 21 0 0 0 chr4 1249654 1249675 -102182 + AT_rich Low_complexity Low_complexity 1 21 0 6 594 479 223 108 0 chr4 1250159 1250289 -101568 + DNAREP1_DM LINE Penelope 432 575 -19 6 594 36 23 0 0 chr4 1250781 1250824 -101033 + AT_rich Low_complexity Low_complexity 1 43 0 6 594 1421 170 135 53 chr4 1251007 1251587 -100270 - DNAREP1_DM LINE Penelope 0 594 86 6 594 1337 198 10 10 chr4 1251588 1251894 -99963 - DNAREP1_DM LINE Penelope -288 306 1 6 594 22 0 0 0 chr4 1252239 1252261 -99596 + AT_rich Low_complexity Low_complexity 1 22 0 6 594 328 113 0 19 chr4 1252725 1252779 -99078 + DNAREP1_DM LINE Penelope 1 53 -541 6 594 482 182 119 64 chr4 1253058 1253207 -98650 - DNAREP1_DM LINE Penelope -29 565 431 6 594 2040 156 62 24 chr4 1253727 1254148 -97709 - DNAREP1_DM LINE Penelope -157 437 1 6 594 234 0 0 0 chr4 1254340 1254366 -97491 + (TA)n Simple_repeat Simple_repeat 1 26 0 6 594 25 0 0 0 chr4 1254403 1254428 -97429 + AT_rich Low_complexity Low_complexity 1 25 0 6 594 28 29 0 0 chr4 1255290 1255325 -96532 + AT_rich Low_complexity Low_complexity 1 35 0 6 594 513 247 22 28 chr4 1256123 1256302 -95555 - DNAREP1_DM LINE Penelope -276 318 141 6 594 488 61 0 0 chr4 1256314 1256380 -95477 - DNAREP1_DM LINE Penelope 0 594 529 6 594 669 202 127 0 chr4 1256434 1256592 -95265 + DNAREP1_DM LINE Penelope 11 188 -406 6 594 1024 176 84 22 chr4 1256592 1256865 -94992 - DNAREP1_DM LINE Penelope -104 490 201 6 594 25 31 0 0 chr4 1257585 1257617 -94240 + AT_rich Low_complexity Low_complexity 1 32 0 6 594 318 245 42 35 chr4 1258284 1258428 -93429 - DNAREP1_DM LINE Penelope 0 594 450 6 594 23 33 0 0 chr4 1258437 1258467 -93390 + AT_rich Low_complexity Low_complexity 1 30 0 6 594 388 121 45 0 chr4 1258801 1258867 -92990 + DNAREP1_DM LINE Penelope 526 594 0 6 594 25 95 0 0 chr4 1259081 1259155 -92702 + AT_rich Low_complexity Low_complexity 1 74 0 6 594 203 61 30 0 chr4 1259743 1259776 -92081 + (ATATG)n Simple_repeat Simple_repeat 3 36 0 6 594 755 161 112 93 chr4 1259952 1260252 -91605 + FW_DM LINE Jockey 97 450 -4242 6 594 2812 129 93 4 chr4 1260257 1260785 -91072 + FW_DM LINE Jockey 1491 2065 -2627 6 594 4928 118 78 52 chr4 1260785 1261821 -90036 + PROTOP_A DNA P 1 1063 -42 6 594 7640 46 72 10 chr4 1261821 1262861 -88996 + PROTOP_A DNA P 1 1105 0 6 594 296 56 0 0 chr4 1262861 1262897 -88960 + PROTOP_A DNA P 1055 1091 -14 6 594 243 0 0 0 chr4 1262897 1262924 -88933 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6 594 9064 25 15 0 chr4 1262943 1264032 -87825 - PROTOP_A DNA P 0 1105 1 6 594 703 128 0 0 chr4 1264038 1264147 -87710 + FW_DM LINE Jockey 2058 2166 -2526 6 594 2117 127 6 15 chr4 1264143 1264472 -87385 + FW_DM LINE Jockey 3665 3990 -702 6 594 328 206 0 0 chr4 1264471 1264539 -87318 + FW_DM LINE Jockey 4416 4483 -209 6 594 1504 143 125 51 chr4 1265239 1265592 -86265 - DNAREP1_DM LINE Penelope -29 565 187 6 594 247 85 40 60 chr4 1265579 1265629 -86228 - DNAREP1_DM LINE Penelope -545 49 1 6 594 24 32 0 0 chr4 1266503 1266534 -85323 + AT_rich Low_complexity Low_complexity 1 31 0 6 594 314 228 136 82 chr4 1266946 1267166 -84691 - DNAREP1_DM LINE Penelope -200 394 163 6 594 314 237 213 0 chr4 1267136 1267305 -84552 - DNAREP1_DM LINE Penelope -273 321 117 6 594 24 77 0 0 chr4 1269177 1269229 -82628 + AT_rich Low_complexity Low_complexity 1 52 0 6 594 317 193 501 0 chr4 1269603 1269739 -82118 + DMCR1A LINE CR1 909 1112 -3358 6 594 500 248 281 23 chr4 1269792 1270048 -81809 + DMCR1A LINE CR1 1589 1910 -2560 6 594 351 106 106 0 chr4 1270184 1270250 -81607 - DNAREP1_DM LINE Penelope -17 577 505 6 594 275 0 29 0 chr4 1270250 1270285 -81572 + (TA)n Simple_repeat Simple_repeat 1 36 0 6 594 272 26 0 116 chr4 1270285 1270328 -81529 + QUASIMODO_LTR LTR Gypsy 2 39 -619 6 594 368 91 106 0 chr4 1270506 1270572 -81285 - DNAREP1_DM LINE Penelope -17 577 505 6 594 257 0 30 0 chr4 1270572 1270605 -81252 + (TA)n Simple_repeat Simple_repeat 1 34 0 6 594 1439 136 176 22 chr4 1270605 1271114 -80743 + QUASIMODO_LTR LTR Gypsy 2 589 -69 6 594 889 81 13 0 chr4 1271186 1271335 -80522 + (TA)n Simple_repeat Simple_repeat 2 152 0 6 594 246 36 0 0 chr4 1271335 1271363 -80494 - DNAREP1_DM LINE Penelope -119 475 448 6 594 629 143 99 73 chr4 1271360 1271511 -80346 - PROTOP DNA P -164 4316 4162 6 594 23 33 0 0 chr4 1271511 1271541 -80316 + AT_rich Low_complexity Low_complexity 1 30 0 6 594 5713 81 129 7 chr4 1271552 1272481 -79376 - PROTOP DNA P -3437 1043 1 6 594 322 0 0 0 chr4 1272481 1272519 -79338 + PROTOP_A DNA P 1067 1104 -1 6 594 1450 168 88 29 chr4 1272519 1272892 -78965 - DMCR1A LINE CR1 -4075 395 1 6 594 396 274 118 25 chr4 1272937 1273251 -78606 - QUASIMODO_I LTR Gypsy -2986 3074 2732 6 594 24 32 0 0 chr4 1273251 1273282 -78575 + AT_rich Low_complexity Low_complexity 1 31 0 6 594 438 318 13 9 chr4 1273564 1273797 -78060 - Gypsy4_I LTR Gypsy -2895 3393 3039 6 594 1027 158 58 83 chr4 1273979 1274352 -77505 - DNAREP1_DM LINE Penelope -262 332 1 6 594 27 49 0 0 chr4 1274865 1274906 -76951 + AT_rich Low_complexity Low_complexity 1 41 0 6 594 22 0 0 0 chr4 1274925 1274947 -76910 + AT_rich Low_complexity Low_complexity 1 22 0 6 594 321 262 37 0 chr4 1275551 1275658 -76199 + DNAREP1_DM LINE Penelope 4 114 -480 6 594 198 0 0 0 chr4 1275659 1275681 -76176 + (TAA)n Simple_repeat Simple_repeat 3 24 0 6 594 1482 208 58 39 chr4 1275694 1276254 -75603 - TART LINE telomeric -6752 7725 7325 6 594 292 177 62 12 chr4 1276254 1276334 -75523 - NINJA_LTR LTR Pao 0 317 234 6 594 305 239 85 61 chr4 1276366 1276531 -75326 - NINJA_LTR LTR Pao -148 169 1 6 594 322 132 0 0 chr4 1276531 1276584 -75273 - NINJA_I LTR Pao 0 6011 5959 6 594 8048 64 28 15 chr4 1276582 1277675 -74182 - DMCR1A LINE CR1 -1824 2646 1539 6 594 2992 110 54 29 chr4 1277671 1278334 -73523 - TART_B1 LINE telomeric -140 10514 10061 6 594 241 0 0 0 chr4 1278332 1278363 -73494 - TAHRE LINE telomeric -7 10456 10426 6 594 1259 7 0 0 chr4 1278363 1278508 -73349 - TART LINE telomeric -3815 10662 10518 6 594 7171 14 1 3 chr4 1278508 1279360 -72497 + PROTOP_A DNA P 1 850 -255 6 594 8981 31 11 1 chr4 1279360 1280454 -71403 - PROTOP_A DNA P 0 1105 1 6 594 2345 11 0 0 chr4 1280454 1280716 -71141 + PROTOP_A DNA P 844 1105 0 6 594 5107 10 3 2 chr4 1280716 1281302 -70555 - TART LINE telomeric -3953 10524 9938 6 594 6524 203 87 54 chr4 1281300 1285200 -66657 - TART LINE telomeric -3421 11056 6948 6 594 5182 118 88 47 chr4 1285204 1286266 -65591 - TART LINE telomeric -3814 10663 9559 6 594 41150 52 23 25 chr4 1286265 1291837 -60020 - HETA LINE telomeric 0 6081 523 6 594 7085 7 85 2 chr4 1291839 1292824 -59033 - TART LINE telomeric 0 14477 13411 6 594 18079 174 27 26 chr4 1292822 1298695 -53162 - HETA LINE telomeric 0 6081 5 6 594 17891 169 45 47 chr4 1298747 1302519 -49338 - HETA LINE telomeric -3814 10663 4019 6 594 198 0 0 0 chr4 1302519 1302541 -49316 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6 594 17891 168 16 21 chr4 1302541 1305439 -46418 - HETA LINE telomeric -2063 4018 1131 6 74 23323 151 33 48 chr4 1305496 1311503 -40354 - HETA LINE telomeric -3748 10729 1 6 595 322 0 0 111 chr4 1311516 1311570 -40287 - TART LINE telomeric -3813 10664 10628 6 595 328 0 0 0 chr4 1311572 1311609 -40248 - HETA LINE telomeric 0 6081 6045 6 595 18777 189 35 42 chr4 1311608 1317936 -33921 - HETA LINE telomeric -1 6080 1 6 595 626 0 0 0 chr4 1317971 1318040 -33817 - TAHRE LINE telomeric -9 10454 10386 6 595 236 0 0 0 chr4 1318040 1318067 -33790 - TART LINE telomeric -13 10450 10424 6 595 18314 159 29 27 chr4 1318070 1323866 -27991 - HETA LINE telomeric -1618 4463 4 6 595 8355 51 139 9 chr4 1323861 1324110 -27747 - TART LINE telomeric -6443 8034 7786 6 595 549 55 0 0 chr4 1324110 1324183 -27674 + (CTTTA)n Simple_repeat Simple_repeat 3 75 0 6 595 8355 51 139 9 chr4 1324183 1325084 -26773 - TART LINE telomeric -6692 7785 6736 6 595 57204 70 22 9 chr4 1325145 1336223 -15634 - TART LINE telomeric -1203 13274 1 6 595 4571 18 124 0 chr4 1336215 1336467 -15390 - TART LINE telomeric -6440 8037 7786 6 595 549 55 0 0 chr4 1336467 1336540 -15317 + (CTTTA)n Simple_repeat Simple_repeat 3 75 0 6 595 4571 18 124 0 chr4 1336540 1336844 -15013 - TART LINE telomeric -6692 7785 7413 6 595 8456 47 139 9 chr4 1336844 1337092 -14765 - TART LINE telomeric -6444 8033 7786 6 595 549 55 0 0 chr4 1337092 1337165 -14692 + (CTTTA)n Simple_repeat Simple_repeat 3 75 0 6 595 8456 47 139 9 chr4 1337165 1338066 -13791 - TART LINE telomeric -6692 7785 6736 6 595 57204 69 25 8 chr4 1338127 1349150 -2707 - TART LINE telomeric -1203 13274 1 6 595 3496 18 157 0 chr4 1349150 1349402 -2455 - TART LINE telomeric -6440 8037 7786 6 595 549 55 0 0 chr4 1349402 1349475 -2382 + (CTTTA)n Simple_repeat Simple_repeat 3 75 0 6 595 3496 18 157 0 chr4 1349475 1349663 -2194 - TART LINE telomeric -6692 7785 7529 6 595 8506 45 139 9 chr4 1349662 1349914 -1943 - TART LINE telomeric -6440 8037 7786 6 595 549 55 0 0 chr4 1349914 1349987 -1870 + (CTTTA)n Simple_repeat Simple_repeat 3 75 0 6 595 8506 45 139 9 chr4 1349987 1350888 -969 - TART LINE telomeric -6692 7785 6735 6 595 1945 253 54 44 chr4 1350940 1351799 -58 - TART LINE telomeric -1203 13274 12640 6 585 26 64 0 0 chrM 69 116 -19401 + AT_rich Low_complexity Low_complexity 1 47 0 1 585 26 74 0 0 chrM 233 287 -19230 + AT_rich Low_complexity Low_complexity 1 54 0 1 585 38 51 0 0 chrM 447 506 -19011 + AT_rich Low_complexity Low_complexity 1 59 0 1 585 26 64 0 0 chrM 649 696 -18821 + AT_rich Low_complexity Low_complexity 1 47 0 1 585 205 177 16 31 chrM 830 894 -18623 + T-rich Low_complexity Low_complexity 1 63 0 1 585 25 99 0 0 chrM 894 975 -18542 + AT_rich Low_complexity Low_complexity 1 81 0 1 585 73 81 0 19 chrM 1050 1265 -18252 + AT_rich Low_complexity Low_complexity 1 211 0 1 585 21 0 0 0 chrM 1652 1673 -17844 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 34 0 0 0 chrM 3198 3232 -16285 + AT_rich Low_complexity Low_complexity 1 34 0 1 585 32 0 0 0 chrM 3877 3909 -15608 + AT_rich Low_complexity Low_complexity 1 32 0 1 585 207 162 43 29 chrM 3929 3999 -15518 + (TTA)n Simple_repeat Simple_repeat 3 73 0 1 585 31 44 0 0 chrM 4270 4315 -15202 + AT_rich Low_complexity Low_complexity 1 45 0 1 585 21 36 0 0 chrM 4609 4637 -14880 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 26 64 0 0 chrM 5520 5567 -13950 + AT_rich Low_complexity Low_complexity 1 47 0 1 585 22 88 0 0 chrM 5586 5643 -13874 + AT_rich Low_complexity Low_complexity 1 57 0 1 585 27 29 0 0 chrM 5774 5808 -13709 + AT_rich Low_complexity Low_complexity 1 34 0 1 585 44 63 0 0 chrM 5834 5913 -13604 + AT_rich Low_complexity Low_complexity 1 79 0 1 585 23 0 0 0 chrM 5958 5981 -13536 + AT_rich Low_complexity Low_complexity 1 23 0 1 585 29 47 0 0 chrM 6288 6331 -13186 + AT_rich Low_complexity Low_complexity 1 43 0 1 585 180 170 0 0 chrM 6401 6454 -13063 + A-rich Low_complexity Low_complexity 6 58 0 1 585 22 88 0 0 chrM 6467 6524 -12993 + AT_rich Low_complexity Low_complexity 1 57 0 1 585 41 48 0 0 chrM 6656 6718 -12799 + AT_rich Low_complexity Low_complexity 1 62 0 1 585 21 36 0 0 chrM 7611 7639 -11878 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 21 82 0 0 chrM 7820 7869 -11648 + AT_rich Low_complexity Low_complexity 1 49 0 1 585 21 82 0 0 chrM 8028 8077 -11440 + AT_rich Low_complexity Low_complexity 1 49 0 1 585 35 71 0 0 chrM 8182 8252 -11265 + AT_rich Low_complexity Low_complexity 1 70 0 1 585 46 95 0 0 chrM 8988 9125 -10392 + AT_rich Low_complexity Low_complexity 1 137 0 1 585 86 98 0 0 chrM 9196 9471 -10046 + AT_rich Low_complexity Low_complexity 1 275 0 1 585 98 90 0 7 chrM 9248 9550 -9967 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 38 22 0 0 chrM 9508 9553 -9964 + AT_rich Low_complexity Low_complexity 1 45 0 1 585 57 47 0 0 chrM 9643 9728 -9789 + AT_rich Low_complexity Low_complexity 1 85 0 1 585 22 99 0 0 chrM 9786 9857 -9660 + AT_rich Low_complexity Low_complexity 1 71 0 1 585 21 0 0 0 chrM 9936 9957 -9560 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 25 0 0 0 chrM 10121 10146 -9371 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 88 88 0 11 chrM 10195 10470 -9047 + AT_rich Low_complexity Low_complexity 1 272 0 1 585 23 68 0 0 chrM 11192 11236 -8281 + AT_rich Low_complexity Low_complexity 1 44 0 1 585 36 74 0 27 chrM 11681 11792 -7725 + AT_rich Low_complexity Low_complexity 1 108 0 1 585 31 58 0 0 chrM 11853 11905 -7612 + AT_rich Low_complexity Low_complexity 1 52 0 1 585 204 200 9 65 chrM 12109 12216 -7301 + A-rich Low_complexity Low_complexity 3 103 0 1 585 34 24 0 0 chrM 12732 12773 -6744 + AT_rich Low_complexity Low_complexity 1 41 0 1 585 69 46 0 30 chrM 13024 13158 -6359 + AT_rich Low_complexity Low_complexity 1 130 0 1 585 24 32 0 0 chrM 13197 13228 -6289 + AT_rich Low_complexity Low_complexity 1 31 0 1 585 108 73 0 0 chrM 13414 13634 -5883 + AT_rich Low_complexity Low_complexity 1 220 0 1 585 203 193 18 0 chrM 13655 13712 -5805 + (TTAA)n Simple_repeat Simple_repeat 1 58 0 1 585 86 100 0 0 chrM 13764 14053 -5464 + AT_rich Low_complexity Low_complexity 1 289 0 1 585 27 49 0 0 chrM 14272 14313 -5204 + AT_rich Low_complexity Low_complexity 1 41 0 1 585 36 40 0 0 chrM 14354 14404 -5113 + AT_rich Low_complexity Low_complexity 1 50 0 1 585 81 58 0 0 chrM 14586 14723 -4794 + AT_rich Low_complexity Low_complexity 1 137 0 1 585 171 44 0 20 chrM 14780 15080 -4437 + AT_rich Low_complexity Low_complexity 1 294 0 1 585 204 37 0 10 chrM 14825 15125 -4392 + AT_rich Low_complexity Low_complexity 1 297 0 1 585 215 31 0 10 chrM 14858 15155 -4362 + AT_rich Low_complexity Low_complexity 1 294 0 1 585 257 20 0 0 chrM 14911 15210 -4307 + AT_rich Low_complexity Low_complexity 1 299 0 1 585 258 20 0 0 chrM 14991 15291 -4226 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 242 27 0 0 chrM 15015 15313 -4204 + AT_rich Low_complexity Low_complexity 1 298 0 1 585 230 33 0 0 chrM 15037 15337 -4180 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 223 37 0 0 chrM 15059 15359 -4158 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 223 37 0 0 chrM 15098 15398 -4119 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 223 37 0 0 chrM 15117 15417 -4100 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 223 37 0 0 chrM 15149 15449 -4068 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 213 40 0 0 chrM 15170 15467 -4050 + AT_rich Low_complexity Low_complexity 1 297 0 1 585 209 43 0 0 chrM 15195 15495 -4022 + AT_rich Low_complexity Low_complexity 1 300 0 1 585 304 186 19 29 chrM 15495 15600 -3917 + (TAAA)n Simple_repeat Simple_repeat 4 107 0 1 585 450 65 0 0 chrM 15629 15691 -3826 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 585 176 30 0 4 chrM 15715 15898 -3619 + AT_rich Low_complexity Low_complexity 1 183 0 1 585 219 36 0 0 chrM 15898 15926 -3591 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 585 167 43 0 23 chrM 15926 16000 -3517 + AT_rich Low_complexity Low_complexity 1 74 0 1 585 198 0 0 0 chrM 16000 16022 -3495 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 585 66 60 0 35 chrM 16022 16133 -3384 + AT_rich Low_complexity Low_complexity 1 106 0 1 585 207 205 37 49 chrM 16140 16304 -3213 + (TATAA)n Simple_repeat Simple_repeat 1 162 0 1 585 231 36 0 0 chrM 16340 16368 -3149 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 585 184 25 0 4 chrM 16397 16581 -2936 + AT_rich Low_complexity Low_complexity 1 184 0 1 585 219 36 0 0 chrM 16581 16609 -2908 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 585 167 43 0 23 chrM 16609 16683 -2834 + AT_rich Low_complexity Low_complexity 1 74 0 1 585 198 0 0 0 chrM 16683 16705 -2812 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 585 66 60 0 35 chrM 16705 16816 -2701 + AT_rich Low_complexity Low_complexity 1 106 0 1 585 207 205 37 49 chrM 16823 16987 -2530 + (TATAA)n Simple_repeat Simple_repeat 1 162 0 1 585 231 36 0 0 chrM 17023 17051 -2466 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 585 82 29 0 0 chrM 17080 17183 -2334 + AT_rich Low_complexity Low_complexity 1 103 0 1 585 213 164 77 54 chrM 17183 17216 -2301 + (TTAAA)n Simple_repeat Simple_repeat 2 36 0 1 585 225 0 0 0 chrM 17216 17241 -2276 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 585 343 147 93 0 chrM 17241 17394 -2123 + (TTAA)n Simple_repeat Simple_repeat 1 167 0 1 585 189 0 0 0 chrM 17406 17427 -2090 + (T)n Simple_repeat Simple_repeat 1 21 0 1 585 189 109 55 0 chrM 17445 17500 -2017 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 585 166 33 0 0 chrM 17501 17716 -1801 + AT_rich Low_complexity Low_complexity 1 215 0 1 585 235 222 62 0 chrM 17728 17890 -1627 + (TA)n Simple_repeat Simple_repeat 1 172 0 1 585 207 105 53 0 chrM 17907 17964 -1553 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 585 166 33 0 0 chrM 17965 18180 -1337 + AT_rich Low_complexity Low_complexity 1 215 0 1 585 235 222 62 0 chrM 18192 18354 -1163 + (TA)n Simple_repeat Simple_repeat 1 172 0 1 585 207 105 53 0 chrM 18371 18428 -1089 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 585 166 33 0 0 chrM 18429 18644 -873 + AT_rich Low_complexity Low_complexity 1 215 0 1 585 235 222 62 0 chrM 18656 18818 -699 + (TA)n Simple_repeat Simple_repeat 1 172 0 1 585 207 105 53 0 chrM 18835 18892 -625 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 585 173 28 0 0 chrM 18893 19108 -409 + AT_rich Low_complexity Low_complexity 1 215 0 1 585 251 216 62 0 chrM 19120 19282 -235 + (TA)n Simple_repeat Simple_repeat 1 172 0 1 585 207 105 53 0 chrM 19299 19356 -161 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 585 76 39 0 0 chrM 19357 19461 -56 + AT_rich Low_complexity Low_complexity 1 104 0 1 585 207 125 0 0 chrM 19461 19501 -16 + (A)n Simple_repeat Simple_repeat 1 40 0 1 585 4869 18 0 3 chrUextra 0 631 -29004025 + Invader2_I LTR Gypsy 3964 4592 0 7 585 2297 8 0 0 chrUextra 631 897 -29003759 + Invader2_LTR LTR Gypsy 1 266 0 7 585 11634 49 71 0 chrUextra 1095 2715 -29001941 - S2_DM DNA Tc1 0 1735 1 7 585 308 131 16 0 chrUextra 3774 3833 -29000823 - DM297_I LTR Gypsy -623 5544 5485 7 585 1616 131 139 29 chrUextra 3833 4342 -29000314 - DNAREP1_DM LINE Penelope 0 594 30 7 585 906 125 0 51 chrUextra 4785 4962 -28999694 + FW_DM LINE Jockey 1371 1538 -3154 7 585 3850 63 29 0 chrUextra 4965 5947 -28998709 + DMCR1A LINE CR1 3416 4470 0 7 585 456 314 6 6 chrUextra 6121 6297 -28998359 - NOMAD_I LTR Gypsy -1228 5344 5169 7 585 328 278 81 27 chrUextra 6634 6782 -28997874 - NOMAD_I LTR Gypsy -2872 3700 3545 7 585 926 302 43 12 chrUextra 6847 7269 -28997387 - NOMAD_I LTR Gypsy -3261 3311 2877 7 585 24 32 0 0 chrUextra 7751 7782 -28996874 + AT_rich Low_complexity Low_complexity 1 31 0 7 585 402 143 0 0 chrUextra 9132 9195 -28995461 + FW_DM LINE Jockey 209 271 -4421 7 585 3478 162 21 3 chrUextra 9193 9855 -28994801 + FW_DM LINE Jockey 948 1621 -3071 7 585 2113 155 110 5 chrUextra 9871 10317 -28994339 + FW_DM LINE Jockey 2644 3136 -1556 7 585 3083 82 70 8 chrUextra 10343 10813 -28993843 + DMRT1C LINE R1 4943 5441 -2 7 585 2717 135 77 0 chrUextra 10812 11371 -28993285 + FW_DM LINE Jockey 4084 4685 -7 7 585 342 280 95 67 chrUextra 12135 12988 -28991668 - Gypsy5_I LTR Gypsy -1628 6064 4748 7 585 868 299 30 7 chrUextra 13033 13440 -28991216 - Gypsy5_I LTR Gypsy -3924 2585 2170 7 585 203 100 80 0 chrUextra 13610 13660 -28990996 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 7 585 198 0 0 0 chrUextra 14147 14169 -28990487 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7 585 33 25 0 0 chrUextra 14642 14682 -28989974 + AT_rich Low_complexity Low_complexity 1 40 0 7 585 187 171 28 14 chrUextra 14682 14753 -28989903 + (TTTA)n Simple_repeat Simple_repeat 2 73 0 7 585 786 142 14 0 chrUextra 16723 16864 -28987792 + DNAREP1_DM LINE Penelope 4 146 -448 7 585 486 141 208 0 chrUextra 16898 17066 -28987590 + DMCR1A LINE CR1 2886 3088 -1382 7 585 1425 198 67 18 chrUextra 17148 17534 -28987122 - Gypsy_LTR LTR Gypsy -77 405 1 7 585 286 325 56 34 chrUextra 19634 20339 -28984317 + Invader2_I LTR Gypsy 2309 3027 -1861 7 585 286 308 19 19 chrUextra 20627 20789 -28983867 + Invader2_I LTR Gypsy 3263 3424 -1562 7 585 8831 48 38 14 chrUextra 21121 22337 -28982319 - DMCR1A LINE CR1 -2237 2233 989 7 585 3494 67 90 25 chrUextra 22334 22948 -28981708 - DMCR1A LINE CR1 -3816 654 1 7 585 1662 143 27 97 chrUextra 23220 23622 -28981034 - Gypsy12A_LTR LTR Gypsy -1904 376 3 7 585 3014 179 159 8 chrUextra 23625 25063 -28979593 - Gypsy12_I LTR Gypsy 0 5546 3892 7 585 2934 226 55 9 chrUextra 25063 25843 -28978813 - Gypsy12_I LTR Gypsy -2609 2937 2122 7 585 1142 161 172 10 chrUextra 25862 26287 -28978369 - Gypsy12_I LTR Gypsy -3899 1647 1154 7 585 2007 95 188 2 chrUextra 26289 26720 -28977936 + DMCR1A LINE CR1 3770 4280 -190 7 585 230 0 0 32 chrUextra 27166 27197 -28977459 + (GAA)n Simple_repeat Simple_repeat 1 30 0 7 585 8299 52 11 2 chrUextra 27579 28721 -28975935 - PROTOP_B DNA P 0 1153 1 7 585 23 33 0 0 chrUextra 29052 29082 -28975574 + AT_rich Low_complexity Low_complexity 1 30 0 7 585 30 0 0 0 chrUextra 29192 29222 -28975434 + AT_rich Low_complexity Low_complexity 1 30 0 7 585 3713 35 0 0 chrUextra 29292 29754 -28974902 - Baggins1 LINE LOA -271 5182 4721 7 585 7822 37 129 0 chrUextra 29752 30873 -28973783 - Baggins1 LINE LOA -1259 4194 2929 7 585 17293 43 59 0 chrUextra 30867 33136 -28971520 - Baggins1 LINE LOA -2839 2614 213 7 585 704 134 204 112 chrUextra 33169 33463 -28971193 + PROTOP_B DNA P 320 640 -513 7 585 3121 138 2 11 chrUextra 33482 34026 -28970630 + DMCR1A LINE CR1 3189 3727 -743 7 585 1087 129 59 10 chrUextra 34031 34235 -28970421 + DMCR1A LINE CR1 3859 4072 -398 7 585 183 146 0 0 chrUextra 39298 39339 -28965317 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 585 22 0 0 0 chrUextra 39564 39586 -28965070 + AT_rich Low_complexity Low_complexity 1 22 0 7 585 246 62 0 0 chrUextra 41634 41666 -28962990 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 585 23 0 0 0 chrUextra 43321 43344 -28961312 + AT_rich Low_complexity Low_complexity 1 23 0 7 585 186 103 0 0 chrUextra 43752 43781 -28960875 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 585 25 51 0 0 chrUextra 44204 44243 -28960413 + AT_rich Low_complexity Low_complexity 1 39 0 7 585 26 0 0 0 chrUextra 45021 45047 -28959609 + AT_rich Low_complexity Low_complexity 1 26 0 7 585 4161 0 0 0 chrUextra 45367 45841 -28958815 - DOC LINE Jockey -4248 477 4 7 585 654 321 76 13 chrUextra 46739 47134 -28957522 - Copia_I LTR Copia -3857 736 317 7 585 251 281 0 0 chrUextra 47178 47260 -28957396 - Copia_I LTR Copia -4356 237 156 7 585 24 0 0 0 chrUextra 47424 47448 -28957208 + AT_rich Low_complexity Low_complexity 1 24 0 7 585 7742 55 43 1 chrUextra 47813 49421 -28955235 - FW2_DM LINE Jockey -95 3866 2191 7 585 5588 127 83 24 chrUextra 49423 50615 -28954041 - FW2_DM LINE Jockey -3258 1434 1 7 585 2794 45 132 4 chrUextra 51102 51865 -28952791 - Transib5 DNA Transib 0 3001 2141 7 585 198 0 0 0 chrUextra 51878 51900 -28952756 + (TTA)n Simple_repeat Simple_repeat 2 23 0 7 585 314 23 0 0 chrUextra 51903 51947 -28952709 - Transib5 DNA Transib -2146 855 812 7 585 1995 37 75 36 chrUextra 52016 52324 -28952332 - Transib5 DNA Transib -2186 815 496 7 585 24870 42 77 15 chrUextra 52330 55779 -28948877 + DMCR1A LINE CR1 1 3663 -807 7 585 4533 22 45 0 chrUextra 55879 56418 -28948238 - DIVER2_I LTR Pao -3151 996 434 7 585 1529 62 0 0 chrUextra 56655 56849 -28947807 - DIVER2_I LTR Pao -3708 439 246 7 585 5249 128 123 21 chrUextra 56848 58209 -28946447 - HETA LINE telomeric -3814 10663 9700 7 585 18619 168 54 53 chrUextra 58231 62252 -28942404 - HETA LINE telomeric -2139 3942 1 7 585 8558 131 71 26 chrUextra 62240 63833 -28940823 - HETA LINE telomeric 0 6081 4050 7 585 563 0 0 0 chrUextra 63838 63898 -28940758 + TAHRE LINE telomeric 10390 10449 -14 7 585 3276 29 11 3 chrUextra 64115 64497 -28940159 - DIVER2_LTR LTR Pao 0 385 1 7 585 1582 45 123 0 chrUextra 64619 64839 -28939817 - DMCR1A LINE CR1 -180 4290 4044 7 585 8958 54 16 0 chrUextra 64841 65937 -28938719 - BS2 LINE Jockey -44 4677 3564 7 585 3457 8 0 0 chrUextra 66037 66424 -28938232 + FW_DM LINE Jockey 4305 4691 -1 7 585 16935 56 76 19 chrUextra 66422 68868 -28935788 - ROOA_I LTR Pao -3533 3316 730 7 585 2802 34 0 0 chrUextra 68862 69188 -28935468 - ROOA_LTR LTR Pao -60 326 1 7 585 23 0 0 0 chrUextra 69645 69668 -28934988 + AT_rich Low_complexity Low_complexity 1 23 0 7 585 3955 69 62 3 chrUextra 69999 70556 -28934100 + DOC4_DM LINE Jockey 1 539 -2252 7 585 4192 83 35 2 chrUextra 70532 71132 -28933524 + DOC4_DM LINE Jockey 387 1006 -1785 7 585 2829 140 47 6 chrUextra 71131 71700 -28932956 + DOC4_DM LINE Jockey 1121 1877 -914 7 585 959 263 40 24 chrUextra 71714 72184 -28932472 + DOC4_DM LINE Jockey 3000 3479 -1261 7 585 2914 44 240 5 chrUextra 72205 72634 -28932022 + DOC4_DM LINE Jockey 2261 2791 0 7 585 21 0 0 0 chrUextra 72772 72793 -28931863 + AT_rich Low_complexity Low_complexity 1 21 0 7 585 232 351 0 0 chrUextra 72824 72901 -28931755 + Gypsy12_I LTR Gypsy 4916 4992 -554 7 585 425 139 76 0 chrUextra 74265 74344 -28930312 + DNAREP1_DM LINE Penelope 1 85 -509 7 585 787 0 102 0 chrUextra 74351 74586 -28930070 + (CAGAC)n Simple_repeat Simple_repeat 1 258 0 7 585 458 43 532 0 chrUextra 74690 74782 -28929874 + ROOA_I LTR Pao 6702 6842 -7 7 585 2520 29 55 0 chrUextra 74797 75108 -28929548 + ROOA_LTR LTR Pao 1 328 -58 7 585 5025 45 23 2 chrUextra 75320 75939 -28928717 + ROOA_I LTR Pao 3146 3777 -3072 7 585 4958 81 8 4 chrUextra 75955 76639 -28928017 + ROOA_I LTR Pao 4740 6075 -2181 7 585 658 147 0 18 chrUextra 76996 77107 -28927549 - MICROPIA_LTR LTR Gypsy -275 201 93 7 585 23 0 0 0 chrUextra 77340 77363 -28927293 + AT_rich Low_complexity Low_complexity 1 23 0 7 585 1538 313 17 17 chrUextra 77363 78000 -28926656 - ZAM_I LTR Gypsy -3372 4118 3482 7 585 273 31 0 0 chrUextra 78004 78036 -28926620 + ROOA_LTR LTR Pao 355 386 0 7 585 4127 90 86 8 chrUextra 78036 78678 -28925978 - I_DM LINE I -1447 4784 4092 7 585 14164 56 40 68 chrUextra 78675 80856 -28923800 + DOC5_DM LINE Jockey 2563 4682 0 7 585 691 168 25 35 chrUextra 80886 81089 -28923567 - DMCR1A LINE CR1 -4263 207 7 7 585 964 227 15 15 chrUextra 81198 81457 -28923199 - DM297_I LTR Gypsy -4804 1363 1105 7 585 235 114 0 22 chrUextra 81574 81619 -28923037 + DM297_LTR LTR Gypsy 275 318 -96 7 585 22 0 0 0 chrUextra 81753 81775 -28922881 + AT_rich Low_complexity Low_complexity 1 22 0 7 585 6841 103 12 22 chrUextra 81815 83146 -28921510 + I_DM LINE I 237 1715 -4516 7 585 4064 24 19 0 chrUextra 83246 83714 -28920942 - DOC3_DM LINE Jockey -2065 2675 2199 7 585 3822 47 11 0 chrUextra 83713 84183 -28920473 - DOC3_DM LINE Jockey -2845 1895 1421 7 585 2460 33 3 0 chrUextra 84834 85134 -28919522 - DOC3_DM LINE Jockey -3323 1417 1117 7 585 3102 35 32 0 chrUextra 85134 85508 -28919148 + ROOA_LTR LTR Pao 1 386 0 7 585 13094 51 16 34 chrUextra 85508 87277 -28917379 + ROOA_I LTR Pao 1 1737 -5112 7 585 4237 60 147 28 chrUextra 87275 87909 -28916747 + ROOA_I LTR Pao 2007 2715 -4134 7 585 949 63 102 0 chrUextra 87928 88055 -28916601 + ROOA_I LTR Pao 3104 3243 -3606 7 585 1648 137 3 10 chrUextra 88054 88334 -28916322 + ROOA_I LTR Pao 5147 5345 -1504 7 585 10205 45 99 1 chrUextra 88745 90085 -28914571 + ROOA_I LTR Pao 5372 6842 -7 7 585 2520 29 55 0 chrUextra 90100 90411 -28914245 + ROOA_LTR LTR Pao 1 328 -58 7 585 4981 17 51 0 chrUextra 90654 91419 -28913237 + DIVER2_I LTR Pao 3314 4117 -30 7 585 2591 23 74 3 chrUextra 91432 91743 -28912913 + DIVER2_LTR LTR Pao 53 385 0 7 585 344 329 63 24 chrUextra 91950 92283 -28912373 - MDG3_I LTR Gypsy -2430 2556 2211 7 585 581 232 13 19 chrUextra 92337 92491 -28912165 - DM412 LTR Gypsy -642 6255 6103 7 585 2081 97 91 0 chrUextra 92491 92799 -28911857 - Gypsy9_LTR LTR Gypsy 0 336 1 7 585 643 190 7 27 chrUextra 92800 92946 -28911710 - DM412 LTR Gypsy -792 6105 5963 7 585 1779 168 70 40 chrUextra 92943 93315 -28911341 - DNAREP1_DM LINE Penelope -19 575 193 7 585 620 39 52 0 chrUextra 93327 93404 -28911252 - DNAREP1_DM LINE Penelope -513 81 1 7 585 547 290 16 16 chrUextra 93435 93624 -28911032 - STALKER4_I LTR Gypsy -4529 2001 1813 7 585 21 57 0 0 chrUextra 94698 94733 -28909923 + AT_rich Low_complexity Low_complexity 1 35 0 7 585 24 0 0 0 chrUextra 95465 95489 -28909167 + AT_rich Low_complexity Low_complexity 1 24 0 7 585 299 286 35 30 chrUextra 95697 95899 -28908757 - I_DM LINE I -1003 5228 5026 7 585 1109 149 11 5 chrUextra 96375 96564 -28908092 - LINEJ1_DM LINE Jockey -2633 2387 2198 7 585 789 68 137 0 chrUextra 96595 96712 -28907944 - DNAREP1_DM LINE Penelope 0 594 462 7 585 822 341 86 16 chrUextra 97231 97872 -28906784 - Gypsy12_I LTR Gypsy -1035 4511 3826 7 585 9252 21 2 1 chrUextra 98043 99090 -28905566 + DMRT1A LINE R1 4129 5176 -7 7 585 2731 157 12 18 chrUextra 99142 99643 -28905013 - MDG1_I LTR Gypsy -6012 584 87 7 585 272 230 13 13 chrUextra 99945 100020 -28904636 - DM412B_LTR LTR Gypsy -262 309 235 7 585 226 244 65 65 chrUextra 100087 100179 -28904477 - TABOR_LTR LTR Gypsy -414 92 1 7 585 701 216 96 0 chrUextra 100179 100343 -28904313 + MDG1_I LTR Gypsy 4481 4660 -1936 7 585 4298 59 120 16 chrUextra 100338 100986 -28903670 - Baggins1 LINE LOA -96 5357 4642 7 585 1628 196 79 5 chrUextra 101016 101420 -28903236 + TABOR_I LTR Gypsy 4509 4942 -1394 7 585 3131 99 158 2 chrUextra 101486 102000 -28902656 + DNAREP1_DM LINE Penelope 1 594 0 7 585 1040 130 264 16 chrUextra 102026 102276 -28902380 + DNAREP1_DM LINE Penelope 184 495 -99 7 585 331 260 19 19 chrUextra 102370 102476 -28902180 + DM412 LTR Gypsy 2554 2659 -4238 7 585 1051 165 70 0 chrUextra 102589 102789 -28901867 + LINEJ1_DM LINE Jockey 2243 2456 -2564 7 585 417 234 120 9 chrUextra 102899 103007 -28901649 + Gypsy8_I LTR Gypsy 3952 4071 -276 7 585 342 199 56 82 chrUextra 103207 103342 -28901314 + Gypsy8_LTR LTR Gypsy 64 304 0 7 585 6669 64 6 1 chrUextra 104059 104902 -28899754 - DMCR1A LINE CR1 0 4470 3624 7 585 3437 26 60 0 chrUextra 104899 105314 -28899342 - DMCR1A LINE CR1 -1012 3458 3019 7 585 218 81 27 0 chrUextra 106593 106630 -28898026 + (TCCTG)n Simple_repeat Simple_repeat 1 38 0 7 585 333 140 0 0 chrUextra 107451 107508 -28897148 + (TCCA)n Simple_repeat Simple_repeat 2 58 0 7 585 26 0 0 0 chrUextra 109047 109073 -28895583 + AT_rich Low_complexity Low_complexity 1 26 0 7 585 248 154 0 0 chrUextra 110458 110497 -28894159 + TRANSIB2 DNA Transib 2531 2569 -275 7 585 321 26 0 0 chrUextra 111380 111418 -28893238 + (CATA)n Simple_repeat Simple_repeat 2 39 0 7 585 255 274 11 0 chrUextra 112129 112224 -28892432 + (TATATG)n Simple_repeat Simple_repeat 5 100 0 7 585 396 111 0 0 chrUextra 112302 112365 -28892291 + (TA)n Simple_repeat Simple_repeat 2 64 0 7 585 207 100 0 0 chrUextra 112512 112542 -28892114 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 7 585 2687 7 0 0 chrUextra 112781 113089 -28891567 - ROO_LTR LTR Pao -120 308 1 7 585 449 147 90 107 chrUextra 113092 113214 -28891442 - G7_DM LINE Jockey -524 668 549 7 585 1010 313 60 7 chrUextra 113287 113706 -28890950 - G_DM LINE Jockey -873 3473 3033 7 585 267 161 899 0 chrUextra 113805 113894 -28890762 - G7_DM LINE Jockey -1002 190 22 7 585 312 286 57 15 chrUextra 114320 114502 -28890154 - G_DM LINE Jockey -289 1753 1557 7 585 248 250 0 14 chrUextra 114757 114826 -28889830 - G_DM LINE Jockey -3100 1246 1179 7 585 3646 173 159 5 chrUextra 115893 116835 -28887821 + MDG1_I LTR Gypsy 3399 4485 -2111 7 585 254 216 13 13 chrUextra 117045 117120 -28887536 - DM412B_LTR LTR Gypsy -262 309 235 7 585 378 218 102 62 chrUextra 117270 117687 -28886969 - Gypsy11_I LTR Gypsy -140 3384 3225 7 585 10295 174 35 3 chrUextra 117692 119830 -28884826 - DM412 LTR Gypsy -595 6302 4097 7 585 2188 271 31 12 chrUextra 119950 120778 -28883878 + FROGGER_I LTR Copia 1148 1991 -86 7 585 1482 54 0 0 chrUextra 121073 121429 -28883227 + (TAA)n Simple_repeat Simple_repeat 1 356 0 7 585 2093 121 30 56 chrUextra 121896 122376 -28882280 + MDG1_I LTR Gypsy 701 1118 -5478 7 585 9386 86 21 8 chrUextra 122675 124123 -28880533 + MDG1_I LTR Gypsy 1217 2683 -3913 7 585 14883 53 35 3 chrUextra 124118 126174 -28878482 + MDG1_I LTR Gypsy 2940 5060 -1536 7 585 1649 87 8 0 chrUextra 126175 126417 -28878239 + MDG1_I LTR Gypsy 5234 5477 -1119 7 585 3672 42 0 0 chrUextra 126425 126883 -28877773 + FW_DM LINE Jockey 1 458 -4234 7 585 1185 311 114 1 chrUextra 126999 127710 -28876946 - OSVALDO_I LTR Gypsy -3927 2726 1936 7 585 595 124 0 0 chrUextra 127715 127812 -28876844 - Gypsy8_I LTR Gypsy -4021 326 230 7 585 675 307 78 21 chrUextra 127888 128373 -28876283 - OSVALDO_I LTR Gypsy -5728 925 413 7 585 807 128 168 39 chrUextra 129290 129493 -28875163 - Gypsy8_I LTR Gypsy -4118 229 1 7 585 758 160 0 34 chrUextra 129493 129642 -28875014 - Gypsy8_LTR LTR Gypsy 0 304 161 7 585 5097 123 70 1 chrUextra 129656 130543 -28874113 + FW_DM LINE Jockey 3148 4095 -597 7 585 1528 132 4 4 chrUextra 130544 130795 -28873861 + FW_DM LINE Jockey 4259 4509 -183 7 73 261 256 0 0 chrUextra 131067 131153 -28873503 - Invader2_I LTR Gypsy -841 3751 3666 7 586 378 49 0 62 chrUextra 131246 131311 -28873345 + DMCR1A LINE CR1 1 61 -4409 7 586 13186 53 52 5 chrUextra 131289 133097 -28871559 + DMCR1A LINE CR1 195 2088 -2382 7 586 1253 239 52 80 chrUextra 133210 133807 -28870849 - Gypsy12_LTR LTR Gypsy -1486 850 271 7 586 8611 101 49 11 chrUextra 133804 135122 -28869534 - Gypsy12_I LTR Gypsy -156 5390 4024 7 586 18124 110 75 84 chrUextra 135153 138747 -28865909 - Gypsy12_I LTR Gypsy -1985 3561 1 7 586 2917 119 2 30 chrUextra 138747 139250 -28865406 - Gypsy12_LTR LTR Gypsy 0 2336 1848 7 586 1000 9 0 0 chrUextra 139350 139466 -28865190 - PROTOP_A DNA P -989 116 1 7 586 353 245 195 13 chrUextra 139939 140088 -28864568 - DIVER2_I LTR Pao -3231 916 741 7 586 2219 138 10 25 chrUextra 140324 140732 -28863924 + GTWIN_LTR LTR Gypsy 1 402 -93 7 586 2298 84 105 22 chrUextra 141316 141716 -28862940 - Mariner2_DM DNA Tc1 -1 911 479 7 586 2033 50 125 13 chrUextra 142123 142426 -28862230 - Mariner2_DM DNA Tc1 -479 433 97 7 586 26 50 0 0 chrUextra 143696 143736 -28860920 + AT_rich Low_complexity Low_complexity 1 40 0 7 586 265 61 0 0 chrUextra 144403 144436 -28860220 + DNAREP1_DM LINE Penelope 20 52 -542 7 586 4209 53 21 3 chrUextra 144441 145047 -28859609 - PROTOP_B DNA P -16 1137 521 7 586 3108 22 95 0 chrUextra 150780 151191 -28853465 - PROTOP_B DNA P -703 450 1 7 586 24 0 0 0 chrUextra 151617 151641 -28853015 + AT_rich Low_complexity Low_complexity 1 24 0 7 586 23 0 0 0 chrUextra 151771 151794 -28852862 + AT_rich Low_complexity Low_complexity 1 23 0 7 586 12581 27 27 1 chrUextra 151893 153496 -28851160 + TC1-2_DM DNA Tc1 1 1644 0 7 586 1061 307 70 66 chrUextra 153639 155423 -28849233 - ZAM_I LTR Gypsy -445 6767 4114 7 586 281 209 45 34 chrUextra 155845 155934 -28848722 - ACCORD2_I LTR Gypsy -4675 2537 2448 7 586 457 291 9 23 chrUextra 156279 156513 -28848143 - Gypsy9_I LTR Gypsy -3626 1051 868 7 586 22 0 0 0 chrUextra 156744 156766 -28847890 + AT_rich Low_complexity Low_complexity 1 22 0 7 586 51 31 0 0 chrUextra 160629 160694 -28843962 + AT_rich Low_complexity Low_complexity 1 65 0 7 586 358 17 68 0 chrUextra 160913 160972 -28843684 + Jockey2 LINE Jockey 3357 3419 -9 7 586 23 54 0 0 chrUextra 161131 161168 -28843488 + AT_rich Low_complexity Low_complexity 1 37 0 7 586 4892 39 40 0 chrUextra 161649 162267 -28842389 - BS2 LINE Jockey -961 3760 3118 7 586 9324 54 61 9 chrUextra 162264 163746 -28840910 - BS2 LINE Jockey -1940 2781 1223 7 586 5252 96 132 6 chrUextra 163744 164621 -28840035 - BS2 LINE Jockey -3723 998 11 7 586 6884 48 123 3 chrUextra 164642 165657 -28838999 - DMCR1A LINE CR1 -543 3927 2791 7 586 4663 72 79 2 chrUextra 165646 166761 -28837895 - DMCR1A LINE CR1 -1798 2672 1472 7 586 25 0 0 0 chrUextra 168102 168127 -28836529 + AT_rich Low_complexity Low_complexity 1 25 0 7 586 1083 23 0 0 chrUextra 172029 172158 -28832498 + PROTOP DNA P 958 1086 -3394 7 586 2934 12 0 0 chrUextra 172169 172491 -28832165 + PROTOP DNA P 4159 4480 0 7 586 392 276 0 38 chrUextra 172506 172638 -28832018 + Gypsy8_I LTR Gypsy 3727 3853 -494 7 586 309 199 6 223 chrUextra 172674 172849 -28831807 + Gypsy8_I LTR Gypsy 4038 4174 -173 7 586 405 157 0 0 chrUextra 173130 173200 -28831456 + Gypsy8_I LTR Gypsy 4278 4347 0 7 586 390 204 152 30 chrUextra 173201 173404 -28831252 + Gypsy8_LTR LTR Gypsy 1 304 0 7 586 397 193 0 24 chrUextra 173404 173489 -28831167 + Gypsy8_I LTR Gypsy 1 83 -4264 7 586 4545 40 2 3 chrUextra 173793 174363 -28830293 + DOC5_DM LINE Jockey 689 1257 -3425 7 586 13328 56 67 38 chrUextra 174362 176321 -28828335 + DOC5_DM LINE Jockey 1956 3972 -710 7 586 236 353 112 4 chrUextra 176595 176845 -28827811 - BLASTOPIA_I LTR Gypsy -1 4480 4204 7 586 3585 2 0 5 chrUextra 176974 177368 -28827288 - Copia_I LTR Copia -4201 392 1 7 586 2376 7 4 4 chrUextra 177368 177644 -28827012 - Copia_LTR LTR Copia 0 276 1 7 586 21 36 0 0 chrUextra 178053 178081 -28826575 + AT_rich Low_complexity Low_complexity 1 28 0 7 586 27 49 0 0 chrUextra 179220 179261 -28825395 + AT_rich Low_complexity Low_complexity 1 41 0 7 586 270 180 0 0 chrUextra 184009 184070 -28820586 + (CAGA)n Simple_repeat Simple_repeat 1 61 0 7 586 21 71 0 0 chrUextra 185407 185449 -28819207 + AT_rich Low_complexity Low_complexity 1 42 0 7 586 24 32 0 0 chrUextra 187331 187362 -28817294 + AT_rich Low_complexity Low_complexity 1 31 0 7 586 323 274 88 0 chrUextra 187487 187600 -28817056 + NOMAD_I LTR Gypsy 534 656 -5916 7 586 353 320 58 32 chrUextra 187912 188067 -28816589 + NOMAD_I LTR Gypsy 1741 1899 -4673 7 586 598 297 9 28 chrUextra 188445 188663 -28815993 + NOMAD_I LTR Gypsy 2358 2571 -4001 7 586 897 269 65 0 chrUextra 188704 188983 -28815673 + NOMAD_I LTR Gypsy 2920 3216 -3356 7 586 363 336 28 28 chrUextra 188970 189255 -28815401 + NOMAD_I LTR Gypsy 5288 5572 -1000 7 586 296 224 6 66 chrUextra 189327 189494 -28815162 + (CAAA)n Simple_repeat Simple_repeat 2 158 0 7 586 603 340 39 43 chrUextra 190191 190679 -28813977 + NOMAD_I LTR Gypsy 6077 6562 -10 7 586 23 0 0 0 chrUextra 191366 191389 -28813267 + AT_rich Low_complexity Low_complexity 1 23 0 7 586 581 244 312 29 chrUextra 191595 191832 -28812824 - Gypsy10_LTR LTR Gypsy -60 304 1 7 586 24 32 0 0 chrUextra 192460 192491 -28812165 + AT_rich Low_complexity Low_complexity 1 31 0 7 586 34 72 0 0 chrUextra 192692 192761 -28811895 + AT_rich Low_complexity Low_complexity 1 69 0 7 586 22 56 0 0 chrUextra 192921 192957 -28811699 + AT_rich Low_complexity Low_complexity 1 36 0 7 586 1791 135 133 24 chrUextra 192984 193561 -28811095 + DNAREP1_DM LINE Penelope 1 399 -195 7 586 3058 30 35 3 chrUextra 193694 194067 -28810589 - ROOA_LTR LTR Pao -1 385 1 7 586 9561 44 67 0 chrUextra 194079 195295 -28809361 - ROOA_I LTR Pao -9 6840 5544 7 586 1129 107 0 19 chrUextra 195395 195557 -28809099 - PROTOP_B DNA P -35 1118 960 7 586 270 158 397 30 chrUextra 195512 195643 -28809013 + Invader3_I LTR Gypsy 1521 1699 -3189 7 586 393 230 11 102 chrUextra 195721 195967 -28808689 + Gypsy_LTR LTR Gypsy 29 230 -252 7 586 614 152 300 15 chrUextra 195975 196175 -28808481 + Invader3_I LTR Gypsy 1554 1810 -3078 7 586 1831 24 158 0 chrUextra 196174 196415 -28808241 + DOC3_DM LINE Jockey 3389 3667 -1073 7 586 9613 188 42 3 chrUextra 196402 198190 -28806466 + Gypsy_I LTR Gypsy 4648 6505 -2 7 586 1215 208 81 53 chrUextra 198221 198618 -28806038 + Gypsy_LTR LTR Gypsy 29 436 -46 7 586 975 223 114 35 chrUextra 198642 198958 -28805698 + DMCR1A LINE CR1 1623 1963 -2507 7 586 572 161 245 6 chrUextra 198952 199115 -28805541 + DNAREP1_DM LINE Penelope 82 283 -311 7 586 2228 188 69 15 chrUextra 199117 199597 -28805059 + DMCR1A LINE CR1 2466 2971 -1499 7 586 243 203 0 33 chrUextra 199618 199679 -28804977 - DMCR1A LINE CR1 -1 4469 4411 7 586 592 190 17 8 chrUextra 199675 199792 -28804864 + Invader3_I LTR Gypsy 679 796 -4092 7 586 1993 62 0 8 chrUextra 199892 200153 -28804503 + BATUMI_I LTR Pao 7705 7963 0 7 586 1809 61 22 31 chrUextra 200153 200434 -28804222 + BATUMI_LTR LTR Pao 35 272 0 7 586 257 196 0 18 chrUextra 200500 200557 -28804099 + Gypsy8_LTR LTR Gypsy 1 56 -248 7 586 25 0 0 0 chrUextra 200558 200583 -28804073 + AT_rich Low_complexity Low_complexity 1 25 0 7 586 797 113 8 0 chrUextra 200626 200750 -28803906 + HMSBEAGLE_I LTR Gypsy 6403 6527 -2 7 586 237 196 0 0 chrUextra 200752 200798 -28803858 + DMLTR5 LTR Gypsy 1 46 -220 7 586 604 122 194 9 chrUextra 200848 200956 -28803700 + DMLTR5 LTR Gypsy 54 181 -85 7 586 4509 40 104 0 chrUextra 200958 201536 -28803120 + IVK_DM LINE I 4 641 -4761 7 586 5958 65 37 22 chrUextra 201549 202397 -28802259 + IVK_DM LINE I 733 1592 -3810 7 586 9620 56 30 0 chrUextra 202391 203619 -28801037 + IVK_DM LINE I 1822 3086 -2316 7 586 4580 58 11 0 chrUextra 203619 204185 -28800471 + IVK_DM LINE I 3257 3828 -1574 7 586 301 24 0 0 chrUextra 204285 204327 -28800329 + IDEFIX_LTR LTR Gypsy 553 594 0 7 586 254 270 67 67 chrUextra 204430 204640 -28800016 + TIRANT_I LTR Gypsy 5093 5302 -2390 7 586 743 296 109 40 chrUextra 204688 205284 -28799372 + ZAM_I LTR Gypsy 5236 5872 -1618 7 586 24 0 0 0 chrUextra 205510 205534 -28799122 + AT_rich Low_complexity Low_complexity 1 24 0 7 586 29 28 0 0 chrUextra 205660 205696 -28798960 + AT_rich Low_complexity Low_complexity 1 36 0 7 586 1450 288 38 13 chrUextra 206477 206955 -28797701 - Ulysses_I LTR Gypsy -2276 4105 3616 7 586 414 229 18 18 chrUextra 208324 208435 -28796221 - Ulysses_I LTR Gypsy -4319 2062 1952 7 586 2535 308 4 24 chrUextra 208626 209420 -28795236 + Gypsy6_I LTR Gypsy 1005 1782 -5230 7 586 276 344 6 69 chrUextra 209450 209625 -28795031 + Gypsy6_I LTR Gypsy 1908 2071 -4941 7 586 3953 280 61 52 chrUextra 209623 211580 -28793076 + Gypsy2_I LTR Gypsy 3256 5280 -855 7 586 430 355 0 0 chrUextra 211598 211753 -28792903 + Gypsy2_I LTR Gypsy 6023 6177 0 7 586 1704 79 26 70 chrUextra 211764 212037 -28792619 + Gypsy6A_LTR LTR Gypsy 42 302 -118 7 586 5146 23 3 2 chrUextra 212178 212779 -28791877 - PROTOP DNA P 0 4480 3879 7 586 30935 25 3 1 chrUextra 212879 217016 -28787640 + TART LINE telomeric 1 7889 -2765 7 586 368 71 18 0 chrUextra 218037 218093 -28786563 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 586 213 159 0 0 chrUextra 219078 219122 -28785534 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 7 586 21 0 0 0 chrUextra 219917 219938 -28784718 + AT_rich Low_complexity Low_complexity 1 21 0 7 586 208 143 0 28 chrUextra 220471 220507 -28784149 + (CATA)n Simple_repeat Simple_repeat 4 38 0 7 586 535 246 77 43 chrUextra 221865 222076 -28782580 - DNAREP1_DM LINE Penelope 0 594 428 7 586 301 233 0 0 chrUextra 222164 222224 -28782432 - DNAREP1_DM LINE Penelope -533 61 2 7 586 35 24 0 0 chrUextra 223202 223244 -28781412 + AT_rich Low_complexity Low_complexity 1 42 0 7 586 1636 37 0 0 chrUextra 225482 225672 -28778984 + DMCR1A LINE CR1 4281 4470 0 7 586 871 54 0 9 chrUextra 225747 225859 -28778797 + ROOA_I LTR Pao 6730 6840 -9 7 586 3569 129 86 0 chrUextra 226210 226792 -28777864 - DMRT1B LINE R1 -2213 2970 2339 7 586 520 95 465 0 chrUextra 226796 226912 -28777744 - DMRT1B LINE R1 -3651 1532 1363 7 586 1007 173 5 0 chrUextra 226911 227096 -28777560 - DMRT1B LINE R1 -3959 1224 1039 7 586 385 127 0 0 chrUextra 227098 227153 -28777503 - DMRT1B LINE R1 -4382 801 747 7 586 735 116 311 7 chrUextra 227246 227394 -28777262 - DMCR1A LINE CR1 -559 3911 3719 7 586 1238 146 43 3 chrUextra 227407 227725 -28776931 - DMCR1A LINE CR1 -2239 2231 1833 7 586 342 330 107 22 chrUextra 228597 228916 -28775740 - Ulysses_I LTR Gypsy -3936 2445 2100 7 586 1190 129 59 10 chrUextra 229015 229219 -28775437 - DMCR1A LINE CR1 -398 4072 3859 7 586 1084 183 5 5 chrUextra 229224 229427 -28775229 - DMCR1A LINE CR1 -743 3727 3525 7 586 2562 7 3 0 chrUextra 229527 229827 -28774829 + Invader2_I LTR Gypsy 4292 4592 0 7 586 2401 19 0 0 chrUextra 229827 230093 -28774563 + Invader2_LTR LTR Gypsy 1 266 0 7 586 2055 50 19 4 chrUextra 230093 230354 -28774302 - DMCR1A LINE CR1 -1008 3462 3198 7 586 16524 50 56 9 chrUextra 230352 232768 -28771888 - DMCR1A LINE CR1 -1940 2530 1 7 586 1973 250 28 28 chrUextra 232783 233417 -28771239 - Copia_I LTR Copia -327 4266 3633 7 586 7136 133 88 7 chrUextra 233542 235875 -28768781 - BS2 LINE Jockey -2195 2526 4 7 586 550 43 14 0 chrUextra 235889 235959 -28768697 + Transib-N1_DM DNA Transib 444 514 0 7 586 24 32 0 0 chrUextra 236029 236060 -28768596 + AT_rich Low_complexity Low_complexity 1 31 0 7 586 34 42 0 0 chrUextra 236380 236428 -28768228 + AT_rich Low_complexity Low_complexity 1 48 0 7 586 813 100 282 0 chrUextra 236985 237155 -28767501 + DNAREP1_DM LINE Penelope 202 419 -175 7 586 568 103 52 0 chrUextra 237182 237279 -28767377 - Jockey2 LINE Jockey -6 3422 3321 7 586 699 24 0 0 chrUextra 237287 237372 -28767284 + (TAA)n Simple_repeat Simple_repeat 3 87 0 7 586 1838 263 0 0 chrUextra 237472 237939 -28766717 - G6_DM LINE Jockey -847 1195 729 7 586 547 258 141 0 chrUextra 238010 238208 -28766448 - Gypsy11_I LTR Gypsy -1567 1957 1732 7 586 680 97 0 0 chrUextra 238443 238536 -28766120 - DNAREP1_DM LINE Penelope -156 438 346 7 586 709 153 17 24 chrUextra 238561 238747 -28765909 - DNAREP1_DM LINE Penelope -262 332 59 7 586 23 68 0 0 chrUextra 239400 239444 -28765212 + AT_rich Low_complexity Low_complexity 1 44 0 7 586 2744 87 66 1 chrUextra 239977 240443 -28764213 - DOC3_DM LINE Jockey -15 4710 4188 7 586 5268 77 72 18 chrUextra 240447 241266 -28763390 - DOC3_DM LINE Jockey -952 3841 2911 7 586 5655 31 30 0 chrUextra 241366 242036 -28762620 - FW_DM LINE Jockey -4002 690 1 7 586 16124 37 37 0 chrUextra 242044 243980 -28760676 + ROOA_I LTR Pao 3304 5310 -1539 7 586 4525 77 53 20 chrUextra 244419 245082 -28759574 + ROOA_I LTR Pao 5349 6033 -816 7 586 32 0 0 0 chrUextra 246509 246541 -28758115 + AT_rich Low_complexity Low_complexity 1 32 0 7 586 35 24 0 0 chrUextra 246640 246682 -28757974 + AT_rich Low_complexity Low_complexity 1 42 0 7 586 1071 168 142 0 chrUextra 248993 249254 -28755402 - FW_DM LINE Jockey -3685 1007 710 7 586 43 47 0 0 chrUextra 249522 249586 -28755070 + AT_rich Low_complexity Low_complexity 1 64 0 7 586 235 323 53 23 chrUextra 249838 249971 -28754685 + Gypsy12_I LTR Gypsy 1439 1575 -3971 7 586 271 351 0 0 chrUextra 250919 251033 -28753623 + Gypsy12_I LTR Gypsy 3213 3326 -2220 7 586 49 0 0 0 chrUextra 251396 251445 -28753211 + AT_rich Low_complexity Low_complexity 1 49 0 7 586 25 51 0 0 chrUextra 251604 251643 -28753013 + AT_rich Low_complexity Low_complexity 1 39 0 7 586 22 56 0 0 chrUextra 251728 251764 -28752892 + AT_rich Low_complexity Low_complexity 1 36 0 7 586 358 290 8 8 chrUextra 251873 252005 -28752651 + BURDOCK_I LTR Gypsy 866 997 -4863 7 586 1032 136 65 68 chrUextra 252865 253158 -28751498 - Gypsy12A_LTR LTR Gypsy -535 1745 1454 7 586 939 0 0 0 chrUextra 253176 253284 -28751372 - DMCR1A LINE CR1 -168 4302 4195 7 586 4160 50 45 11 chrUextra 253275 253807 -28750849 - DMCR1A LINE CR1 -492 3978 3429 7 586 850 49 164 0 chrUextra 253805 253927 -28750729 - DMCR1A LINE CR1 -2578 1892 1751 7 586 1894 93 291 14 chrUextra 253926 254284 -28750372 - DMCR1A LINE CR1 -2989 1481 1025 7 586 1361 129 28 11 chrUextra 254290 254601 -28750055 - DMCR1A LINE CR1 -3899 571 7 7 586 257 146 0 0 chrUextra 254668 254709 -28749947 + DMCR1A LINE CR1 744 784 -3686 7 586 255 174 0 0 chrUextra 254854 254900 -28749756 + NOMAD_I LTR Gypsy 6527 6572 0 7 586 1217 165 125 34 chrUextra 255247 255711 -28748945 - DNAREP1_DM LINE Penelope -201 393 1 7 586 523 33 0 0 chrUextra 255830 255891 -28748765 - DNAREP1_DM LINE Penelope -532 62 2 7 586 21243 43 61 29 chrUextra 256592 259434 -28745222 - Gypsy4_I LTR Gypsy -3256 3032 1 7 586 1930 70 6 109 chrUextra 259434 259754 -28744902 - Gypsy4_LTR LTR Gypsy 0 287 1 7 586 4967 22 20 21 chrUextra 260246 260857 -28743799 - ROO_I LTR Pao -7646 610 1 7 586 3478 45 2 30 chrUextra 260857 261297 -28743359 - ROO_LTR LTR Pao 0 428 1 7 586 2371 90 0 3 chrUextra 261397 261720 -28742936 - DMCR1A LINE CR1 -345 4125 3804 7 587 270 307 52 40 chrUextra 262779 262952 -28741704 - Ulysses_I LTR Gypsy -4333 2048 1874 7 587 720 310 3 29 chrUextra 263272 263578 -28741078 + Gypsy12_I LTR Gypsy 3826 4123 -1423 7 587 3390 5 0 0 chrUextra 263871 264250 -28740406 - QUASIMODO_LTR LTR Gypsy -279 379 1 7 587 212 146 0 111 chrUextra 265352 265406 -28739250 + polypurine Low_complexity Low_complexity 2 49 0 7 587 201 138 0 0 chrUextra 265551 265580 -28739076 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 587 29 0 0 0 chrUextra 267789 267818 -28736838 + AT_rich Low_complexity Low_complexity 1 29 0 7 587 4146 12 0 16 chrUextra 271027 271525 -28733131 - Gypsy4_I LTR Gypsy -5798 490 1 7 587 2572 14 3 0 chrUextra 271525 271811 -28732845 - Gypsy4_LTR LTR Gypsy 0 287 1 7 587 2985 86 21 7 chrUextra 271812 272243 -28732413 + DM297_I LTR Gypsy 1302 1738 -4429 7 587 1964 60 41 4 chrUextra 272243 272513 -28732143 + DM297_I LTR Gypsy 2580 2859 -3308 7 587 6793 77 14 17 chrUextra 272511 273477 -28731179 + DM297_I LTR Gypsy 2991 3953 -2214 7 587 3349 54 69 0 chrUextra 273485 273932 -28730724 - IVK_DM LINE I -10 5392 4915 7 587 3596 71 75 0 chrUextra 273931 274453 -28730203 + DM297_I LTR Gypsy 3943 4503 -1664 7 587 1407 58 0 6 chrUextra 274553 274727 -28729929 + LSU-rRNA_Dme rRNA rRNA 2406 2578 -1322 7 587 5491 69 38 3 chrUextra 274719 275434 -28729222 + R2_DM LINE R2 1644 2383 -1224 7 587 348 317 40 56 chrUextra 275545 275855 -28728801 - G6_DM LINE Jockey -2618 484 277 7 587 397 337 45 19 chrUextra 276111 276423 -28728233 - G6_DM LINE Jockey -866 1176 857 7 587 3124 203 38 18 chrUextra 277043 277864 -28726792 - DMRT1A LINE R1 0 5183 4284 7 587 702 99 0 0 chrUextra 278111 278212 -28726444 + Gypsy9_LTR LTR Gypsy 1 101 -235 7 587 2203 84 46 71 chrUextra 278235 278672 -28725984 + Gypsy9_I LTR Gypsy 122 547 -4130 7 587 384 77 0 0 chrUextra 278724 278776 -28725880 + Gypsy9_I LTR Gypsy 1243 1294 -3383 7 587 2952 153 9 9 chrUextra 278779 279437 -28725219 + Gypsy9_I LTR Gypsy 1529 2322 -3966 7 587 1632 183 26 2 chrUextra 279442 279851 -28724805 + Gypsy9_I LTR Gypsy 2995 3243 -1434 7 587 2102 51 43 20 chrUextra 279861 280162 -28724494 + Gypsy9_I LTR Gypsy 3352 3659 -1018 7 587 1708 80 91 34 chrUextra 280162 280458 -28724198 + Gypsy9_I LTR Gypsy 4129 4441 -236 7 587 1337 108 19 0 chrUextra 280463 280676 -28723980 + Gypsy9_LTR LTR Gypsy 120 336 0 7 587 32 86 0 0 chrUextra 280796 280877 -28723779 + AT_rich Low_complexity Low_complexity 1 81 0 7 587 356 328 21 19 chrUextra 281003 281213 -28723443 + DMRT1B LINE R1 684 912 -4271 7 587 1083 62 50 0 chrUextra 281920 282080 -28722576 - STALKER4_LTR LTR Gypsy -234 168 1 7 587 2924 23 3 0 chrUextra 284719 285071 -28719585 + ROO_LTR LTR Pao 76 428 0 7 587 24 0 0 0 chrUextra 285837 285861 -28718795 + AT_rich Low_complexity Low_complexity 1 24 0 7 587 1751 113 70 0 chrUextra 286016 286316 -28718340 + MAX_LTR LTR Pao 1 321 0 7 587 22 0 0 0 chrUextra 286624 286646 -28718010 + AT_rich Low_complexity Low_complexity 1 22 0 7 587 416 122 0 118 chrUextra 287278 287371 -28717285 - Gypsy8_LTR LTR Gypsy -5 299 218 7 587 898 179 14 29 chrUextra 287385 287592 -28717064 - LINEJ1_DM LINE Jockey -2508 2512 2309 7 587 2109 52 118 50 chrUextra 287601 287964 -28716692 + DMCR1A LINE CR1 1 388 -4082 7 587 823 10 0 0 chrUextra 288064 288166 -28716490 - DM176_LTR LTR Gypsy -405 102 1 7 587 3795 0 0 0 chrUextra 288167 288604 -28716052 - ACCORD_LTR LTR Gypsy -121 437 1 7 587 3976 68 25 22 chrUextra 288607 289195 -28715461 + TC1_DM DNA Tc1 196 785 -881 7 587 663 104 16 33 chrUextra 289297 289485 -28715171 + DMRT1B LINE R1 2962 3181 -2002 7 587 447 18 0 0 chrUextra 289487 289542 -28715114 + DMRT1B LINE R1 3667 3721 -1462 7 587 4755 143 112 1 chrUextra 289541 290432 -28714224 + DMRT1B LINE R1 3776 4765 -418 7 587 542 65 0 0 chrUextra 290441 290518 -28714138 + DMRT1B LINE R1 5107 5183 0 7 587 544 339 46 33 chrUextra 290763 291217 -28713439 - NINJA_I LTR Pao -713 5298 4839 7 587 9650 23 0 1 chrUextra 291382 292555 -28712101 + FW_DM LINE Jockey 3521 4692 0 7 587 1781 276 48 19 chrUextra 292557 292692 -28711964 + Copia_I LTR Copia 3266 3396 -1197 7 587 423 83 0 0 chrUextra 292692 292752 -28711904 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 587 1781 276 48 19 chrUextra 292752 293451 -28711205 + Copia_I LTR Copia 3397 4123 -470 7 587 3496 34 14 0 chrUextra 294639 295076 -28709580 - DMRT1A LINE R1 -4740 443 1 7 587 443 179 71 65 chrUextra 295111 295266 -28709390 + Gypsy11_I LTR Gypsy 538 693 -2831 7 587 295 136 121 114 chrUextra 295242 295391 -28709265 + MDG1_I LTR Gypsy 657 806 -5790 7 587 3698 276 50 28 chrUextra 295916 297740 -28706916 + STALKER4_I LTR Gypsy 1802 3665 -2865 7 587 12966 58 19 6 chrUextra 297848 299752 -28704904 - I_DM LINE I -4205 2026 99 7 587 2557 113 155 22 chrUextra 299764 300409 -28704247 + ACCORD2_I LTR Gypsy 364 1313 -5899 7 587 1403 80 93 0 chrUextra 300438 300663 -28703993 - ROVER-LTR_DM LTR Gypsy -121 246 1 7 587 1142 171 39 18 chrUextra 300662 300942 -28703714 - ROVER-I_DM LTR Gypsy 0 6584 6299 7 587 1598 10 0 0 chrUextra 301048 301251 -28703405 - Invader2_I LTR Gypsy -4389 203 1 7 587 2319 4 0 0 chrUextra 301251 301517 -28703139 - Invader2_LTR LTR Gypsy 0 266 1 7 587 317 224 102 0 chrUextra 301620 301718 -28702938 + DNAREP1_DM LINE Penelope 86 193 -401 7 587 1553 135 86 33 chrUextra 301908 302409 -28702247 + DNAREP1_DM LINE Penelope 100 486 -108 7 587 377 196 0 20 chrUextra 302409 302508 -28702148 - DMLTR5 LTR Gypsy 0 266 170 7 587 5661 56 3 3 chrUextra 302505 303259 -28701397 - IVK_DM LINE I -4 5398 4645 7 587 1613 41 59 0 chrUextra 303258 303477 -28701179 - IVK_DM LINE I -1010 4392 4161 7 587 1539 134 93 12 chrUextra 303477 303809 -28700847 - MDG1_LTR LTR Gypsy -30 412 54 7 587 1533 19 0 0 chrUextra 303809 304136 -28700520 + (TTA)n Simple_repeat Simple_repeat 1 327 0 7 587 377 339 51 34 chrUextra 304236 304590 -28700066 - NINJA_I LTR Pao -813 5198 4839 7 587 3959 73 3 23 chrUextra 304848 305463 -28699193 + DOC5_DM LINE Jockey 104 706 -3976 7 587 3091 33 7 16 chrUextra 305464 305892 -28698764 + DOC5_DM LINE Jockey 1419 1842 -2840 7 587 809 62 0 0 chrUextra 305890 306002 -28698654 + DOC5_DM LINE Jockey 1955 2066 -2616 7 587 2173 89 42 0 chrUextra 305995 306332 -28698324 + DOC5_DM LINE Jockey 2277 2627 -2055 7 587 5198 34 108 39 chrUextra 306329 307281 -28697375 + DOC5_DM LINE Jockey 3326 4343 -339 7 587 2609 13 3 6 chrUextra 307394 307709 -28696947 + ROO_LTR LTR Pao 115 428 0 7 587 1199 211 67 106 chrUextra 307747 308287 -28696369 + G7_DM LINE Jockey 664 1182 -10 7 587 475 155 10 0 chrUextra 308303 308400 -28696256 - MDG1_I LTR Gypsy -3165 3431 3334 7 587 313 27 0 0 chrUextra 308427 308464 -28696192 - BS3_DM LINE Jockey -28 1762 1726 7 587 15073 37 40 2 chrUextra 308477 310446 -28694210 - DOC3_DM LINE Jockey 0 4740 2698 7 587 9065 33 6 5 chrUextra 310546 311681 -28692975 - DMCR1A LINE CR1 -3334 1136 1 7 587 2440 104 116 108 chrUextra 311689 312293 -28692363 + DOC5_DM LINE Jockey 2687 3295 -1387 7 587 2412 41 12 3 chrUextra 312300 312640 -28692016 + DOC5_DM LINE Jockey 4340 4682 0 7 587 22 80 0 0 chrUextra 313927 313977 -28690679 + AT_rich Low_complexity Low_complexity 1 50 0 7 587 1521 62 0 0 chrUextra 314344 314552 -28690104 - ZAM_LTR LTR Gypsy -264 208 1 7 587 1379 134 3 75 chrUextra 314553 314835 -28689821 - FW_DM LINE Jockey -4334 358 97 7 587 596 143 0 9 chrUextra 314978 315084 -28689572 - Gypsy12A_LTR LTR Gypsy -997 1283 1179 7 587 228 267 0 0 chrUextra 316443 316518 -28688138 - Invader2_I LTR Gypsy -2396 2196 2122 7 587 8086 49 40 7 chrUextra 316763 317879 -28686777 - TRANSIB2 DNA Transib -1445 1399 247 7 587 402 115 115 0 chrUextra 317867 317963 -28686693 - TRANSIB2 DNA Transib -2737 107 1 7 587 535 333 18 7 chrUextra 319450 319731 -28684925 + OSVALDO_I LTR Gypsy 508 791 -5862 7 587 7719 15 12 0 chrUextra 319838 320767 -28683889 - Copia2_I LTR Copia -699 3463 2524 7 587 11903 9 41 0 chrUextra 320760 322813 -28681843 - Copia2_I LTR Copia -1825 2337 201 7 587 2861 179 143 9 chrUextra 323280 324074 -28680582 - LINEJ1_DM LINE Jockey -213 4807 3908 7 587 3276 102 4 10 chrUextra 324092 324606 -28680050 + DMRT1C LINE R1 3633 4143 -1300 7 587 240 118 0 0 chrUextra 324604 324638 -28680018 + DMRT1C LINE R1 4316 4349 -1094 7 587 1962 139 168 1 chrUextra 324659 325336 -28679320 + DMRT1C LINE R1 4653 5443 0 7 587 3268 87 23 59 chrUextra 325965 326525 -28678131 + Gypsy8_I LTR Gypsy 1207 1746 -2601 7 587 4293 109 139 36 chrUextra 326515 327419 -28677237 + Gypsy8_I LTR Gypsy 2152 3148 -1199 7 587 480 90 0 53 chrUextra 327474 327568 -28677088 + Gypsy8_I LTR Gypsy 3331 3419 -928 7 587 9410 49 0 2 chrUextra 327655 328875 -28675781 - DMCR1A LINE CR1 -1012 3458 2241 7 587 7099 43 82 5 chrUextra 328975 330296 -28674360 - DOC3_DM LINE Jockey -3254 1486 63 7 587 527 35 114 23 chrUextra 330316 330404 -28674252 - DOC3_DM LINE Jockey -4640 100 5 7 587 228 267 0 0 chrUextra 331450 331525 -28673131 + Invader2_I LTR Gypsy 2122 2196 -2396 7 587 309 217 0 0 chrUextra 332056 332116 -28672540 - NOMAD_I LTR Gypsy -2872 3700 3641 7 587 865 256 114 12 chrUextra 332217 332541 -28672115 - NOMAD_I LTR Gypsy -3182 3390 3034 7 587 259 259 11 11 chrUextra 332696 332786 -28671870 - NOMAD_I LTR Gypsy -5021 1551 1462 7 587 232 323 0 0 chrUextra 332827 332892 -28671764 - NOMAD_I LTR Gypsy -5184 1388 1324 7 587 4410 62 51 14 chrUextra 333109 333696 -28670960 - DMCR1A LINE CR1 -2349 2121 1513 7 587 4746 37 122 1 chrUextra 333692 334786 -28669870 - DMCR1A LINE CR1 -3160 1310 84 7 587 1723 330 14 11 chrUextra 334923 335570 -28669086 - Gypsy6_I LTR Gypsy -5454 1558 910 7 587 30 45 0 0 chrUextra 335816 335860 -28668796 + AT_rich Low_complexity Low_complexity 1 44 0 7 587 182 91 0 29 chrUextra 336001 336035 -28668621 + (TGG)n Simple_repeat Simple_repeat 2 34 0 7 587 2015 91 16 54 chrUextra 336108 336422 -28668234 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 587 21 0 0 0 chrUextra 336564 336585 -28668071 + AT_rich Low_complexity Low_complexity 1 21 0 7 587 21 0 0 0 chrUextra 336752 336773 -28667883 + AT_rich Low_complexity Low_complexity 1 21 0 7 587 218 284 0 43 chrUextra 337162 337254 -28667402 + A-rich Low_complexity Low_complexity 1 88 0 7 587 22 0 0 0 chrUextra 337297 337319 -28667337 + AT_rich Low_complexity Low_complexity 1 22 0 7 587 2296 334 54 45 chrUextra 338183 340366 -28664290 + Invader6_I LTR Gypsy 2 2194 -1905 7 587 784 69 10 0 chrUextra 340363 340464 -28664192 - PROTOP_B DNA P -1051 102 1 7 587 462 114 0 0 chrUextra 340605 340675 -28663981 + (TA)n Simple_repeat Simple_repeat 1 70 0 7 587 1050 344 56 29 chrUextra 340678 341760 -28662896 - Gypsy4_I LTR Gypsy -192 6096 5112 7 587 2421 315 25 17 chrUextra 341824 342901 -28661755 - Gypsy4_I LTR Gypsy -1745 4543 3458 7 587 234 239 0 0 chrUextra 342912 342958 -28661698 - Gypsy4_I LTR Gypsy -2791 3497 3452 7 587 1298 307 163 14 chrUextra 343543 344315 -28660341 - Copia2_I LTR Copia -54 4108 3222 7 587 1297 309 53 21 chrUextra 344361 345038 -28659618 + BLASTOPIA_I LTR Gypsy 2501 3199 -1282 7 587 2027 41 146 0 chrUextra 345224 345491 -28659165 + Baggins1 LINE LOA 2 307 -5146 7 587 2546 33 7 0 chrUextra 345496 345801 -28658855 + Baggins1 LINE LOA 635 941 -4512 7 587 2198 55 7 0 chrUextra 345788 346060 -28658596 + Baggins1 LINE LOA 1286 1559 -3894 7 587 25 31 0 0 chrUextra 346371 346403 -28658253 + AT_rich Low_complexity Low_complexity 1 32 0 7 587 21 36 0 0 chrUextra 348360 348388 -28656268 + AT_rich Low_complexity Low_complexity 1 28 0 7 587 201 305 24 12 chrUextra 348979 349062 -28655594 + (TCG)n Simple_repeat Simple_repeat 3 86 0 7 587 1243 205 71 81 chrUextra 349416 349883 -28654773 - Gypsy_LTR LTR Gypsy -20 462 1 7 587 1411 74 0 38 chrUextra 350144 350355 -28654301 + DMCR1A LINE CR1 129 331 -4139 7 587 9889 27 2 2 chrUextra 350349 351481 -28653175 + DMCR1A LINE CR1 446 1577 -2893 7 587 14644 41 34 19 chrUextra 351581 353429 -28651227 + DIVER2_I LTR Pao 1207 3082 -1065 7 587 6031 21 51 1 chrUextra 353428 354149 -28650507 + DIVER2_I LTR Pao 3199 3955 -192 7 587 2359 82 3 3 chrUextra 354249 354568 -28650088 + S_DM DNA Tc1 671 989 -747 7 587 5266 40 15 1 chrUextra 354568 355222 -28649434 + PROTOP DNA P 1 663 -3817 7 587 536 62 0 0 chrUextra 355243 355307 -28649349 - QUASIMODO_I LTR Gypsy -5996 64 1 7 587 5019 49 30 9 chrUextra 355307 355907 -28648749 - QUASIMODO_LTR LTR Gypsy 0 658 40 7 587 195 42 0 0 chrUextra 355907 355931 -28648725 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 587 5019 49 30 9 chrUextra 355931 355975 -28648681 - QUASIMODO_LTR LTR Gypsy -619 39 1 7 587 232 174 0 0 chrUextra 356749 356795 -28647861 + (TTA)n Simple_repeat Simple_repeat 2 47 0 7 587 27 96 0 0 chrUextra 357709 357792 -28646864 + AT_rich Low_complexity Low_complexity 1 83 0 7 587 20813 36 21 6 chrUextra 359533 362041 -28642615 + DOC3_DM LINE Jockey 835 3379 -1361 7 587 13783 157 7 16 chrUextra 362141 364559 -28640097 + HETA LINE telomeric 1542 3938 -2143 7 587 2588 25 164 0 chrUextra 365006 365374 -28639282 - ROO_LTR LTR Pao 0 428 1 7 587 1463 124 167 15 chrUextra 365378 365677 -28638979 + DNAREP1_DM LINE Penelope 85 545 -49 7 587 1924 270 75 20 chrUextra 367260 368442 -28636214 + QUASIMODO_I LTR Gypsy 4701 6054 -6 7 587 647 116 0 0 chrUextra 369028 369123 -28635533 + DNAREP1_DM LINE Penelope 500 594 0 7 587 2258 55 34 0 chrUextra 369391 369683 -28634973 - DOC4_DM LINE Jockey -8 2783 2482 7 587 2094 21 0 12 chrUextra 369783 370026 -28634630 + BATUMI_I LTR Pao 6762 7001 -962 7 587 12659 128 46 10 chrUextra 369864 372190 -28632466 - BATUMI_I LTR Pao -1063 6851 4386 7 587 327 85 0 0 chrUextra 372303 372350 -28632306 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 587 2397 32 0 34 chrUextra 374800 375123 -28629533 - TAHRE LINE telomeric -10132 331 20 7 587 267 93 0 0 chrUextra 375100 375143 -28629513 - TAHRE LINE telomeric 0 10463 10421 7 587 11512 68 16 17 chrUextra 375164 377190 -28627466 - TAHRE LINE telomeric -9 10454 7623 7 587 2214 137 24 16 chrUextra 377302 377681 -28626975 - DM412B_LTR LTR Gypsy -189 382 1 7 587 259 59 0 0 chrUextra 377681 377714 -28626942 - G5A_DM LINE Jockey -421 2420 2388 7 587 4156 104 56 0 chrUextra 377714 378318 -28626338 + BS2 LINE Jockey 454 1091 -3630 7 587 1049 265 96 20 chrUextra 378300 378643 -28626013 + BS2 LINE Jockey 2642 3010 -1711 7 587 1744 52 24 0 chrUextra 378644 378856 -28625800 + BS3_DM LINE Jockey 390 606 -1184 7 587 2911 61 3 0 chrUextra 378855 379215 -28625441 + BS3_DM LINE Jockey 797 1157 -633 7 587 662 69 0 0 chrUextra 379214 379301 -28625355 + BS3_DM LINE Jockey 1704 1790 0 7 587 1374 206 133 0 chrUextra 379300 379645 -28625011 + GTWIN_I LTR Gypsy 4050 4440 -1981 7 587 8611 107 98 86 chrUextra 379746 382097 -28622559 + TART LINE telomeric 8950 10666 -3811 7 587 3369 85 2 0 chrUextra 382197 382658 -28621998 - I_DM LINE I -2337 3894 3433 7 587 13228 66 6 7 chrUextra 382667 384490 -28620166 - I_DM LINE I -2995 3236 1415 7 587 7867 24 22 0 chrUextra 384590 385504 -28619152 - DM1731_I LTR Copia -3042 934 1 7 587 2392 35 69 0 chrUextra 385504 385794 -28618862 - DM1731_LTR LTR Copia 0 336 27 7 587 9540 24 23 0 chrUextra 385787 386881 -28617775 + DMCR1A LINE CR1 1039 2157 -2313 7 587 2152 4 0 0 chrUextra 386981 387213 -28617443 + Gypsy4_I LTR Gypsy 6057 6288 0 7 587 2561 18 3 0 chrUextra 387213 387499 -28617157 + Gypsy4_LTR LTR Gypsy 1 287 0 7 587 7797 75 60 21 chrUextra 387507 388724 -28615932 - DM297_I LTR Gypsy -4884 1283 20 7 587 2466 92 39 8 chrUextra 388730 389114 -28615542 - DM297_LTR LTR Gypsy -18 396 1 7 587 505 122 0 0 chrUextra 389163 389237 -28615419 - FW_DM LINE Jockey -3176 1516 1443 7 587 2141 4 0 0 chrUextra 389337 389570 -28615086 + ACCORD_LTR LTR Gypsy 326 558 0 7 587 559 90 45 0 chrUextra 389570 389713 -28614943 - TC1_DM DNA Tc1 -1470 196 1 7 587 22 0 0 0 chrUextra 391143 391165 -28613491 + AT_rich Low_complexity Low_complexity 1 22 0 7 587 4039 13 0 0 chrUextra 391671 392121 -28612535 - R1_DM LINE R1 -1609 3747 3298 7 587 2186 31 0 0 chrUextra 392119 392376 -28612280 - R1_DM LINE R1 -2425 2931 2675 7 73 8772 60 27 6 chrUextra 392374 393520 -28611136 - R1_DM LINE R1 -4186 1170 1 7 588 2357 12 0 0 chrUextra 393553 393809 -28610847 - R1_DM LINE R1 0 5356 5101 7 588 11338 36 29 2 chrUextra 393909 395259 -28609397 + DMCR1A LINE CR1 863 2248 -2222 7 588 6675 29 10 1 chrUextra 395265 396038 -28608618 + DMCR1A LINE CR1 2555 3334 -1136 7 588 6919 13 0 0 chrUextra 396138 396903 -28607753 - FW_DM LINE Jockey -3927 765 1 7 588 5884 56 61 1 chrUextra 396920 397724 -28606932 + DOC5_DM LINE Jockey 1823 2674 -2008 7 588 3142 70 80 70 chrUextra 397727 398266 -28606390 + DOC5_DM LINE Jockey 2977 3520 -1162 7 588 260 162 54 108 chrUextra 398369 398480 -28606176 + Stalker2_I LTR Gypsy 799 903 -6499 7 588 23 0 0 0 chrUextra 398594 398617 -28606039 + AT_rich Low_complexity Low_complexity 1 23 0 7 588 1480 311 62 59 chrUextra 398691 400463 -28604193 + MDG1_I LTR Gypsy 1456 3191 -3422 7 588 213 65 0 0 chrUextra 401129 401160 -28603496 + (TA)n Simple_repeat Simple_repeat 1 31 0 7 588 23 0 0 0 chrUextra 402928 402951 -28601705 + AT_rich Low_complexity Low_complexity 1 23 0 7 588 197 119 24 0 chrUextra 403485 403527 -28601129 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 588 11849 54 9 7 chrUextra 405558 407023 -28597633 + DMCR1A LINE CR1 2455 3922 -548 7 588 1495 44 0 0 chrUextra 407125 407308 -28597348 - Baggins1 LINE LOA -4570 883 701 7 588 3381 204 14 56 chrUextra 407308 408134 -28596522 + Gypsy12_LTR LTR Gypsy 1 792 -1544 7 588 4148 162 112 56 chrUextra 408106 409197 -28595459 + Gypsy12_LTR LTR Gypsy 1084 2235 -101 7 588 257 179 11 116 chrUextra 409552 409647 -28595009 + ROO_I LTR Pao 645 729 -7527 7 588 192 97 0 0 chrUextra 410889 410920 -28593736 + (ATTCG)n Simple_repeat Simple_repeat 4 34 0 7 588 21 0 0 0 chrUextra 411339 411360 -28593296 + AT_rich Low_complexity Low_complexity 1 21 0 7 588 354 23 0 0 chrUextra 411477 411520 -28593136 + (A)n Simple_repeat Simple_repeat 1 43 0 7 588 2105 276 15 8 chrUextra 411521 412269 -28592387 + Copia_I LTR Copia 1527 2279 -2314 7 588 2086 296 26 20 chrUextra 412505 413527 -28591129 + Copia_I LTR Copia 2720 3748 -845 7 588 8806 18 11 1 chrUextra 413627 414649 -28590007 + ROO_I LTR Pao 5662 6693 -1563 7 588 9060 18 3 1 chrUextra 414648 415681 -28588975 + ROO_I LTR Pao 6872 7906 -350 7 588 374 221 11 98 chrUextra 415786 416017 -28588639 - Gypsy_LTR LTR Gypsy -267 215 29 7 588 257 158 397 30 chrUextra 416095 416226 -28588430 - Invader3_I LTR Gypsy -3189 1699 1521 7 588 1454 88 0 15 chrUextra 416181 416378 -28588278 + PROTOP_B DNA P 960 1153 0 7 588 700 99 150 18 chrUextra 416439 416552 -28588104 - DNAREP1_DM LINE Penelope -140 454 327 7 588 418 193 0 12 chrUextra 416560 416644 -28588012 + DNAREP1_DM LINE Penelope 117 199 -395 7 588 636 178 96 17 chrUextra 416644 416821 -28587835 - DNAREP1_DM LINE Penelope -270 324 134 7 588 3739 175 100 18 chrUextra 416827 417732 -28586924 - Invader3_I LTR Gypsy -3231 1657 679 7 588 243 203 0 33 chrUextra 417728 417789 -28586867 + DMCR1A LINE CR1 4411 4469 -1 7 588 5356 43 15 21 chrUextra 417913 418576 -28586080 - Baggins1 LINE LOA -3 5450 4792 7 588 8034 87 44 7 chrUextra 418725 419829 -28584827 - R1_DM LINE R1 -3113 2243 1099 7 588 345 168 0 221 chrUextra 419821 419943 -28584713 - R1_DM LINE R1 -4676 680 586 7 588 3178 122 50 20 chrUextra 420360 420905 -28583751 - QUASIMODO_LTR LTR Gypsy -55 603 43 7 588 9474 40 17 0 chrUextra 420896 422023 -28582633 - DMRT1B LINE R1 0 5183 4038 7 588 15377 33 12 7 chrUextra 422253 424100 -28580556 + DMRT1B LINE R1 1 1819 -3364 7 588 9107 106 12 14 chrUextra 426277 428244 -28576412 - Gypsy10_I LTR Gypsy -3014 2264 400 7 588 2645 32 3 9 chrUextra 428344 428690 -28575966 - Invader2_I LTR Gypsy -4247 345 2 7 588 1648 87 17 0 chrUextra 428691 428922 -28575734 - Invader2_LTR LTR Gypsy 0 266 32 7 588 462 257 171 0 chrUextra 429170 429310 -28575346 - DOC3_DM LINE Jockey -3213 1527 1364 7 588 314 198 53 32 chrUextra 429346 429440 -28575216 - DMCR1A LINE CR1 -3999 471 376 7 588 1674 188 337 23 chrUextra 429452 430067 -28574589 - DMRT1A LINE R1 -614 4569 3762 7 588 12098 144 5 1 chrUextra 430363 432271 -28572385 + HETA LINE telomeric 1273 3188 -2893 7 588 8202 30 16 0 chrUextra 432371 433326 -28571330 - DMRT1B LINE R1 -2987 2196 1227 7 588 8203 30 7 0 chrUextra 433322 434278 -28570378 - DMRT1B LINE R1 -4066 1117 155 7 588 16627 23 6 0 chrUextra 434379 436280 -28568376 - FW_DM LINE Jockey -2588 2104 192 7 588 15356 1 0 0 chrUextra 436380 438013 -28566643 - Gypsy3_I LTR Gypsy -4544 1633 1 7 588 2454 8 0 0 chrUextra 438013 438280 -28566376 - Gypsy3_LTR LTR Gypsy 0 398 132 7 588 7367 170 26 94 chrUextra 438380 440242 -28564414 + HETA LINE telomeric 75 1809 -4272 7 588 5793 297 16 12 chrUextra 440367 442217 -28562439 - NOMAD_I LTR Gypsy -2131 4441 2586 7 588 803 176 26 20 chrUextra 442346 442497 -28562159 + HETRP_DM Satellite Satellite 1518 1669 -203 7 588 3634 128 102 23 chrUextra 442509 444125 -28560531 - HOBO DNA hAT 0 3016 1104 7 588 251 81 0 0 chrUextra 444134 444171 -28560485 - HOBO DNA hAT -2070 946 910 7 588 327 328 16 10 chrUextra 444521 444715 -28559941 + BLASTOPIA_I LTR Gypsy 3541 3735 -746 7 588 213 39 0 0 chrUextra 445765 445791 -28558865 + (CAAAT)n Simple_repeat Simple_repeat 3 28 0 7 588 1802 74 222 0 chrUextra 445800 446111 -28558545 + DMCR1A LINE CR1 3375 3754 -716 7 588 778 77 0 0 chrUextra 446219 446323 -28558333 + G5A_DM LINE Jockey 1412 1515 -1326 7 588 5418 64 96 14 chrUextra 446323 447239 -28557417 + G5A_DM LINE Jockey 1624 2614 -227 7 588 261 100 0 0 chrUextra 447235 447275 -28557381 + G5A_DM LINE Jockey 2794 2833 -8 7 588 409 305 22 19 chrUextra 447525 447846 -28556810 - TV1I LTR Gypsy -1051 4912 4591 7 588 15284 21 1 4 chrUextra 448164 450006 -28554650 - Gypsy12_I LTR Gypsy -2650 2896 1062 7 588 286 308 19 19 chrUextra 450278 450440 -28554216 + MDG3_I LTR Gypsy 3263 3424 -1562 7 588 284 339 16 10 chrUextra 450760 450954 -28553702 + BLASTOPIA_I LTR Gypsy 3541 3735 -746 7 588 1984 21 14 3 chrUextra 452039 452330 -28552326 + STALKER4_I LTR Gypsy 6185 6478 -52 7 588 2656 22 3 0 chrUextra 452353 452677 -28551979 + STALKER4_LTR LTR Gypsy 1 325 -77 7 588 2636 26 75 0 chrUextra 452677 452825 -28551831 - Stalker3_LTR LTR Gypsy 0 372 225 7 588 207 0 0 0 chrUextra 452825 452848 -28551808 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 588 2636 26 75 0 chrUextra 452848 453045 -28551611 - Stalker3_LTR LTR Gypsy -148 224 2 7 588 337 44 0 12 chrUextra 453045 453113 -28551543 - STALKER4_I LTR Gypsy 0 6530 6491 7 588 216 212 22 45 chrUextra 453118 453207 -28551449 + T-rich Low_complexity Low_complexity 6 92 0 7 588 691 279 16 28 chrUextra 453482 453869 -28550787 - Gypsy11_I LTR Gypsy -137 3387 3006 7 588 266 189 0 0 chrUextra 453975 454028 -28550628 + DMRT1A LINE R1 2553 2605 -2578 7 588 10144 36 29 1 chrUextra 454041 455328 -28549328 + DMCR1A LINE CR1 48 1370 -3100 7 588 2852 71 9 11 chrUextra 455356 455798 -28548858 - I_DM LINE I -4035 2196 1756 7 588 12721 54 15 23 chrUextra 455898 457703 -28546953 + Gypsy7_I LTR Gypsy 3090 4879 -105 7 588 9262 157 15 17 chrUextra 457827 459652 -28545004 - HETA LINE telomeric -1824 4257 2437 7 588 358 182 13 0 chrUextra 459753 459830 -28544826 - DNAREP1_DM LINE Penelope -493 101 24 7 588 1263 166 147 8 chrUextra 460209 460610 -28544046 - Gypsy12A_LTR LTR Gypsy -1 2335 1812 7 588 5740 52 118 0 chrUextra 460717 461558 -28543098 - BS3_DM LINE Jockey 0 1790 851 7 588 14105 30 30 1 chrUextra 461671 463460 -28541196 - DMRT1B LINE R1 -3180 2003 163 7 588 180 0 0 0 chrUextra 463460 463480 -28541176 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 7 588 1592 87 31 12 chrUextra 463614 463870 -28540786 - ROVER-LTR_DM LTR Gypsy -106 261 1 7 588 2303 167 58 9 chrUextra 463870 464437 -28540219 - ROVER-I_DM LTR Gypsy 0 6584 5990 7 588 2795 170 108 2 chrUextra 464472 465402 -28539254 - ROVER-I_DM LTR Gypsy -1276 5308 4281 7 588 4956 64 105 12 chrUextra 465502 466368 -28538288 - DMCR1A LINE CR1 -2487 1983 1037 7 588 5808 67 11 4 chrUextra 466452 467311 -28537345 + DMCR1A LINE CR1 7 1119 -3351 7 588 26 0 0 0 chrUextra 469140 469166 -28535490 + AT_rich Low_complexity Low_complexity 1 26 0 7 588 22 0 0 0 chrUextra 469307 469329 -28535327 + AT_rich Low_complexity Low_complexity 1 22 0 7 588 677 296 16 61 chrUextra 469419 469732 -28534924 - TIRANT_I LTR Gypsy -6343 1349 1051 7 588 386 237 47 82 chrUextra 470087 470257 -28534399 - TIRANT_I LTR Gypsy -7528 164 1 7 588 826 167 86 125 chrUextra 470372 470708 -28533948 - TIRANT_LTR LTR Gypsy -94 323 1 7 588 2874 36 3 0 chrUextra 470708 471100 -28533556 - Invader2_I LTR Gypsy -4176 416 24 7 588 3737 63 20 0 chrUextra 471200 471708 -28532948 - G5_DM LINE Jockey -1466 3390 2873 7 588 625 212 34 0 chrUextra 471714 471860 -28532796 - DMCR1A LINE CR1 -2523 1947 1797 7 588 1171 112 20 0 chrUextra 472004 472200 -28532456 + DOC LINE Jockey 558 757 -3968 7 588 2421 52 28 0 chrUextra 472199 472523 -28532133 - G5_DM LINE Jockey -79 4777 4445 7 588 2573 114 43 13 chrUextra 472515 472977 -28531679 + DOC LINE Jockey 571 1046 -3679 7 588 2776 20 0 3 chrUextra 473088 473613 -28531043 + MDG3_I LTR Gypsy 4397 4986 0 7 588 2004 26 3 57 chrUextra 473613 473895 -28530761 + MDG3_LTR LTR Gypsy 1 267 0 7 588 311 109 91 30 chrUextra 473895 473951 -28530705 + TART LINE telomeric 3139 3198 -11279 7 588 371 108 0 30 chrUextra 474999 475057 -28529599 - DMTOM1_LTR LTR Gypsy -6 404 349 7 588 493 148 38 83 chrUextra 475057 475190 -28529466 - DMTOM1_LTR LTR Gypsy 0 410 284 7 588 242 207 17 0 chrUextra 475207 475265 -28529391 - DM176_LTR LTR Gypsy -141 366 308 7 588 248 133 22 0 chrUextra 475383 475428 -28529228 - DM176_LTR LTR Gypsy -238 269 224 7 588 21 0 0 0 chrUextra 475533 475554 -28529102 + AT_rich Low_complexity Low_complexity 1 21 0 7 588 557 73 0 92 chrUextra 475566 475686 -28528970 - DMCR1A LINE CR1 -102 4368 4260 7 588 1464 43 0 0 chrUextra 475996 476184 -28528472 - DMCR1A LINE CR1 -205 4265 4078 7 588 4668 35 0 0 chrUextra 476181 476754 -28527902 - DMCR1A LINE CR1 -357 4113 3541 7 588 22 35 0 0 chrUextra 477661 477690 -28526966 + AT_rich Low_complexity Low_complexity 1 29 0 7 588 2010 149 9 0 chrUextra 478023 478373 -28526283 - DMCR1A LINE CR1 -836 3634 3282 7 588 1084 87 6 12 chrUextra 478388 478549 -28526107 - DMCR1A LINE CR1 -1239 3231 3072 7 588 511 104 13 0 chrUextra 478549 478626 -28526030 + DNAREP1_DM LINE Penelope 2 79 -515 7 588 370 262 97 16 chrUextra 478910 479096 -28525560 - QUASIMODO_I LTR Gypsy -4388 1672 1472 7 588 227 139 0 0 chrUextra 479182 479225 -28525431 - QUASIMODO_I LTR Gypsy -4694 1366 1324 7 588 873 314 20 20 chrUextra 479282 479773 -28524883 - TV1I LTR Gypsy -5044 919 429 7 588 30 0 0 0 chrUextra 479820 479850 -28524806 + AT_rich Low_complexity Low_complexity 1 30 0 7 588 928 167 112 25 chrUextra 480263 480503 -28524153 - QUASIMODO_LTR LTR Gypsy -69 589 329 7 588 2797 24 0 0 chrUextra 480603 480934 -28523722 - R2_DM LINE R2 -1345 2262 1932 7 588 5715 54 12 1 chrUextra 480956 481710 -28522946 - R1_DM LINE R1 -69 5287 4526 7 588 2518 180 7 48 chrUextra 481710 482293 -28522363 + Gypsy12_LTR LTR Gypsy 1 559 -1777 7 588 2604 101 90 37 chrUextra 482480 483046 -28521610 - BATUMI_I LTR Pao -7335 628 33 7 588 2131 21 7 28 chrUextra 483052 483342 -28521314 - BATUMI_I LTR Pao -679 7284 7001 7 588 667 12 12 0 chrUextra 483341 483427 -28521229 + PROTOP DNA P 2043 2129 -2351 7 588 1051 88 69 0 chrUextra 483428 483588 -28521068 - Gypsy9_LTR LTR Gypsy -165 171 1 7 588 26 0 0 0 chrUextra 483597 483623 -28521033 + AT_rich Low_complexity Low_complexity 1 26 0 7 588 213 65 0 0 chrUextra 483623 483654 -28521002 + (T)n Simple_repeat Simple_repeat 1 31 0 7 588 27 0 0 0 chrUextra 483655 483682 -28520974 + AT_rich Low_complexity Low_complexity 1 27 0 7 588 25 0 0 0 chrUextra 483776 483801 -28520855 + AT_rich Low_complexity Low_complexity 1 25 0 7 588 470 123 0 0 chrUextra 484160 484241 -28520415 + MICROPIA_LTR LTR Gypsy 233 313 -163 7 588 3821 25 16 8 chrUextra 484349 484833 -28519823 - PROTOP DNA P -3945 535 48 7 588 935 124 200 16 chrUextra 484844 485089 -28519567 + Gypsy12A_LTR LTR Gypsy 811 1100 -1180 7 588 3945 146 48 82 chrUextra 485089 486064 -28518592 + Gypsy12A_LTR LTR Gypsy 1336 2277 -3 7 588 3469 199 39 19 chrUextra 486227 487956 -28516700 - SAR_DM Satellite Satellite -396 1763 1 7 588 5007 242 20 30 chrUextra 488058 489665 -28514991 + TABOR_I LTR Gypsy 4368 5958 -378 7 588 4366 8 0 0 chrUextra 489907 490422 -28514234 + Copia2_I LTR Copia 3648 4162 0 7 588 1530 5 21 0 chrUextra 490458 490644 -28514012 + Copia2_LTR_DM LTR Copia 9 198 0 7 588 35 24 0 0 chrUextra 490646 490688 -28513968 + AT_rich Low_complexity Low_complexity 1 42 0 7 588 26 0 0 0 chrUextra 490806 490832 -28513824 + AT_rich Low_complexity Low_complexity 1 26 0 7 588 245 125 46 15 chrUextra 491146 491211 -28513445 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 588 35 63 0 0 chrUextra 492143 492206 -28512450 + AT_rich Low_complexity Low_complexity 1 63 0 7 588 23 68 0 0 chrUextra 492584 492628 -28512028 + AT_rich Low_complexity Low_complexity 1 44 0 7 588 1045 135 69 171 chrUextra 493084 493384 -28511272 + HOBO DNA hAT 44 312 -2704 7 588 453 162 98 9 chrUextra 493384 493496 -28511160 + PROTOP_B DNA P 1 122 -1031 7 588 2701 184 12 2 chrUextra 493598 494111 -28510545 - Invader3_I LTR Gypsy -3692 1196 679 7 588 226 203 0 33 chrUextra 494107 494168 -28510488 + DMCR1A LINE CR1 4411 4469 -1 7 588 7101 190 34 27 chrUextra 495440 497179 -28507477 - HETA LINE telomeric -1633 4448 2723 7 588 2802 143 77 0 chrUextra 497279 497797 -28506859 + DMRT1B LINE R1 593 1150 -4033 7 588 1762 140 14 0 chrUextra 497833 498126 -28506530 + DMRT1B LINE R1 1955 2251 -2932 7 588 2291 146 64 2 chrUextra 498122 498542 -28506114 + DMRT1B LINE R1 2460 2905 -2278 7 588 2791 160 6 2 chrUextra 498529 499012 -28505644 + DMRT1B LINE R1 3101 3585 -1598 7 588 4320 177 14 0 chrUextra 499112 499958 -28504698 - HETA LINE telomeric -4094 1987 1130 7 588 3346 190 18 43 chrUextra 500001 500844 -28503812 - TAHRE LINE telomeric -9562 901 80 7 588 12358 36 50 8 chrUextra 500944 502672 -28501984 - DMCR1A LINE CR1 -1464 3006 1205 7 588 3955 48 69 10 chrUextra 502774 503401 -28501255 - DM297_I LTR Gypsy -201 5966 5303 7 588 6436 64 70 1 chrUextra 503395 504377 -28500279 - DM297_I LTR Gypsy -1175 4992 3943 7 588 844 58 41 0 chrUextra 504376 504497 -28500159 + IVK_DM LINE I 4915 5040 -362 7 588 4047 26 0 2 chrUextra 504599 505104 -28499552 - DMCR1A LINE CR1 -3919 551 48 7 588 2328 231 85 5 chrUextra 505117 506318 -28498338 - DMRT1A LINE R1 -2578 2605 1283 7 588 1822 31 253 0 chrUextra 506422 506915 -28497741 + Baggins1 LINE LOA 3470 4086 -1367 7 588 7356 30 36 0 chrUextra 506909 507846 -28496810 + Baggins1 LINE LOA 4483 5453 0 7 588 4415 52 2 29 chrUextra 508245 508877 -28495779 - Gypsy7_I LTR Gypsy -4369 615 1 7 588 1526 88 0 49 chrUextra 508877 509141 -28495515 - Gypsy7_LTR LTR Gypsy 0 251 1 7 588 735 75 0 28 chrUextra 509141 509250 -28495406 - Gypsy7_I LTR Gypsy 0 4984 4879 7 588 3803 77 3 46 chrUextra 509350 509964 -28494692 - Gypsy7_I LTR Gypsy -94 4890 4303 7 588 6059 15 77 0 chrUextra 510066 511040 -28493616 - DMRT1B LINE R1 -2689 2494 1446 7 588 275 186 34 0 chrUextra 511146 511202 -28493454 - STALKER4_LTR LTR Gypsy -23 379 322 7 588 2670 34 63 0 chrUextra 511202 511403 -28493253 + Stalker3_LTR LTR Gypsy 1 201 -171 7 588 207 0 0 0 chrUextra 511403 511426 -28493230 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 588 2670 34 63 0 chrUextra 511426 511574 -28493082 + Stalker3_LTR LTR Gypsy 202 370 -2 7 588 291 49 0 0 chrUextra 511574 511615 -28493041 + Stalker2_I LTR Gypsy 1 41 -7361 7 588 4629 71 14 12 chrUextra 511886 512554 -28492102 - TRANSIB4 DNA Transib -102 2508 1840 7 588 7205 66 46 4 chrUextra 512552 513603 -28491053 - TRANSIB4 DNA Transib -1404 1206 112 7 588 13980 15 16 4 chrUextra 513703 515417 -28489239 + DOC2_DM LINE Jockey 896 2629 -2164 7 588 6562 53 65 7 chrUextra 515517 517138 -28487518 + DMCR1A LINE CR1 2688 4401 -69 7 588 4799 24 7 5 chrUextra 517330 517928 -28486728 + CIRCE LINE Composite 3126 3724 -2632 7 588 2101 32 0 4 chrUextra 517924 518205 -28486451 + CIRCE LINE Composite 4391 4670 -1686 7 588 6684 16 25 1 chrUextra 518204 519042 -28485614 - STALKER4_I LTR Gypsy -2365 4165 3308 7 588 5948 77 68 11 chrUextra 520954 522455 -28482201 - DMCR1A LINE CR1 -2629 1841 7 7 588 235 146 0 0 chrUextra 522522 522563 -28482093 + DMCR1A LINE CR1 744 784 -3686 7 588 46 0 0 0 chrUextra 522765 522811 -28481845 + AT_rich Low_complexity Low_complexity 1 46 0 7 588 3041 126 18 18 chrUextra 522845 523396 -28481260 + DOC LINE Jockey 4147 4697 -28 7 588 414 37 0 0 chrUextra 523414 523468 -28481188 - DNAREP1_DM LINE Penelope -360 234 181 7 588 306 53 0 0 chrUextra 523517 523555 -28481101 + DNAREP1_DM LINE Penelope 445 482 -112 7 73 6976 41 12 0 chrUextra 523560 524444 -28480212 + DMCR1A LINE CR1 1547 2441 -2029 7 589 13320 32 49 1 chrUextra 524572 526278 -28478378 + Gypsy4_I LTR Gypsy 2453 4241 -2047 7 589 4412 61 25 6 chrUextra 526379 527020 -28477636 - TRANSIB4 DNA Transib -1957 653 1 7 589 381 193 0 11 chrUextra 527020 527108 -28477548 + DNAREP1_DM LINE Penelope 159 245 -349 7 589 1043 203 40 57 chrUextra 527108 527479 -28477177 - Gypsy_LTR LTR Gypsy -117 365 1 7 589 312 211 0 0 chrUextra 527482 527558 -28477098 - Gypsy_I LTR Gypsy -3 6504 6429 7 589 538 167 86 16 chrUextra 527591 527719 -28476937 + DNAREP1_DM LINE Penelope 432 568 -26 7 589 682 123 21 14 chrUextra 527931 528071 -28476585 - DNAREP1_DM LINE Penelope -262 332 192 7 589 10738 76 33 19 chrUextra 528182 529866 -28474790 - TART LINE telomeric -3842 10635 8928 7 589 451 65 182 0 chrUextra 529966 530043 -28474613 + DMRT1C LINE R1 5351 5441 -2 7 589 27 29 0 0 chrUextra 531755 531789 -28472867 + AT_rich Low_complexity Low_complexity 1 34 0 7 589 21 36 0 0 chrUextra 532727 532755 -28471901 + AT_rich Low_complexity Low_complexity 1 28 0 7 589 4831 10 0 0 chrUextra 533511 534132 -28470524 - DM297_I LTR Gypsy -216 5951 5331 7 589 2570 9 0 6 chrUextra 534115 534440 -28470216 - DM297_I LTR Gypsy -1953 4214 3892 7 589 5828 5 52 0 chrUextra 534428 535172 -28469484 - DM297_I LTR Gypsy -2378 3789 3007 7 589 5406 32 6 4 chrUextra 535272 535952 -28468704 + DMRT1B LINE R1 4503 5183 0 7 589 226 0 0 0 chrUextra 535984 536010 -28468646 + STALKER4_LTR LTR Gypsy 1 26 -376 7 589 266 45 0 62 chrUextra 536008 536056 -28468600 + BATUMI_I LTR Pao 7001 7045 -918 7 589 5038 54 53 28 chrUextra 536053 536886 -28467770 + BATUMI_I LTR Pao 100 953 -7010 7 589 32 26 0 0 chrUextra 536886 536925 -28467731 + AT_rich Low_complexity Low_complexity 1 39 0 7 589 273 296 88 12 chrUextra 537907 538078 -28466578 + BS LINE Jockey 2093 2276 -2850 7 589 306 236 79 0 chrUextra 538076 538165 -28466491 + BS LINE Jockey 2638 2733 -2393 7 589 524 143 231 8 chrUextra 539284 539418 -28465238 + Transib-N1_DM DNA Transib 351 514 0 7 589 14458 0 0 1 chrUextra 540546 542199 -28462457 - MAX_I LTR Pao -1417 6497 4846 7 589 338 176 104 38 chrUextra 542302 542408 -28462248 - MDG1_I LTR Gypsy -6483 113 1 7 589 1867 94 74 3 chrUextra 542408 542706 -28461950 - MDG1_LTR LTR Gypsy -30 412 94 7 589 372 88 0 0 chrUextra 542708 542765 -28461891 + (TTA)n Simple_repeat Simple_repeat 3 59 0 7 589 2370 41 3 28 chrUextra 543232 543557 -28461099 + NINJA_LTR LTR Pao 1 317 0 7 589 2363 38 53 64 chrUextra 543557 543950 -28460706 + NINJA_I LTR Pao 1 389 -5622 7 589 4808 247 25 24 chrUextra 544051 545582 -28459074 - TOM_I LTR Gypsy -3251 2861 1328 7 589 5047 189 3 6 chrUextra 545797 546802 -28457854 + ROVER-I_DM LTR Gypsy 3757 4758 -1826 7 589 1418 177 87 0 chrUextra 546806 547140 -28457516 + ROVER-I_DM LTR Gypsy 4946 5308 -1276 7 589 1006 193 121 24 chrUextra 547142 547439 -28457217 + ROVER-I_DM LTR Gypsy 5892 6217 -367 7 589 3300 39 99 0 chrUextra 547546 548182 -28456474 + DOC3_DM LINE Jockey 3798 4496 -244 7 589 731 45 9 0 chrUextra 548179 548289 -28456367 + DOC3_DM LINE Jockey 4630 4740 0 7 589 322 295 0 0 chrUextra 548290 548402 -28456254 + BS2 LINE Jockey 2773 2884 -1837 7 589 5630 66 9 7 chrUextra 548409 549176 -28455480 + BS3_DM LINE Jockey 235 1003 -787 7 589 317 161 32 21 chrUextra 549345 549440 -28455216 - HMSBEAGLE_I LTR Gypsy -5817 712 617 7 589 733 123 240 0 chrUextra 549466 549637 -28455019 - HMSBEAGLE_I LTR Gypsy -6314 215 4 7 589 1102 126 78 18 chrUextra 549638 549856 -28454800 - DMLTR5 LTR Gypsy -1 265 35 7 589 262 85 128 0 chrUextra 549998 550033 -28454623 - PROTOP_B DNA P -7 1146 1106 7 589 605 119 8 25 chrUextra 550033 550154 -28454502 + M4DM DNA Transib 1 119 -1316 7 589 423 61 0 83 chrUextra 550153 550225 -28454431 + M4DM DNA Transib 304 369 -1066 7 589 3391 99 7 21 chrUextra 550348 550905 -28453751 + M4DM DNA Transib 406 954 -481 7 589 3401 221 16 7 chrUextra 551007 551864 -28452792 - TABOR_I LTR Gypsy -1435 4901 4037 7 589 1846 236 56 15 chrUextra 551867 552580 -28452076 - STALKER4_I LTR Gypsy -2671 3859 3118 7 589 840 254 18 111 chrUextra 552735 553178 -28451478 - Invader3_I LTR Gypsy -1744 3144 2743 7 589 5437 53 1 0 chrUextra 554464 555181 -28449475 + IVK_DM LINE I 2130 2847 -2555 7 589 772 21 0 0 chrUextra 555180 555274 -28449382 + IVK_DM LINE I 3750 3843 -1559 7 589 1323 90 0 0 chrUextra 555273 555461 -28449195 + IVK_DM LINE I 3972 4159 -1243 7 589 4126 47 36 58 chrUextra 555456 556072 -28448584 - Gypsy3_I LTR Gypsy -5246 931 330 7 589 1877 36 0 0 chrUextra 556172 556392 -28448264 - FW_DM LINE Jockey -4469 223 4 7 589 745 188 78 58 chrUextra 556409 556652 -28448004 - STALKER4_I LTR Gypsy -5398 1132 885 7 589 740 112 24 8 chrUextra 556998 557124 -28447532 - STALKER4_I LTR Gypsy -5645 885 758 7 589 358 162 112 0 chrUextra 557439 557519 -28447137 - DNAREP1_DM LINE Penelope -439 155 67 7 589 210 37 0 0 chrUextra 557667 557694 -28446962 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 589 361 214 0 23 chrUextra 557694 557780 -28446876 + HETRP_DM Satellite Satellite 1549 1632 -240 7 589 5032 9 2 2 chrUextra 557880 558432 -28446224 + SSU-rRNA_Dme rRNA rRNA 1274 1825 -170 7 589 1890 35 53 0 chrUextra 558448 558674 -28445982 + Gypsy6_LTR LTR Gypsy 170 407 0 7 589 1932 23 44 116 chrUextra 558674 558967 -28445689 + Gypsy6_I LTR Gypsy 1 272 -6740 7 589 4667 8 0 0 chrUextra 558970 559475 -28445181 + Gypsy6_I LTR Gypsy 3058 3562 -3450 7 589 23 0 0 0 chrUextra 559579 559602 -28445054 + AT_rich Low_complexity Low_complexity 1 23 0 7 589 287 70 0 23 chrUextra 560255 560299 -28444357 + DNAREP1_DM LINE Penelope 188 230 -364 7 589 1002 84 300 9 chrUextra 560326 560536 -28444120 + DNAREP1_DM LINE Penelope 197 467 -127 7 589 402 227 10 93 chrUextra 560565 560811 -28443845 - Gypsy_LTR LTR Gypsy -252 230 29 7 589 262 147 419 29 chrUextra 560889 560994 -28443662 - Invader3_I LTR Gypsy -3189 1699 1554 7 589 1408 98 0 15 chrUextra 560975 561172 -28443484 + PROTOP_B DNA P 960 1153 0 7 589 2167 8 0 0 chrUextra 561277 561512 -28443144 + Invader1_LTR LTR Gypsy 189 423 0 7 589 1549 6 0 0 chrUextra 561512 561682 -28442974 + Copia2_LTR_DM LTR Copia 29 198 0 7 589 229 155 51 17 chrUextra 561814 561873 -28442783 + (TA)n Simple_repeat Simple_repeat 1 61 0 7 589 3291 10 90 0 chrUextra 562458 562846 -28441810 + Invader1_LTR LTR Gypsy 1 423 0 7 589 12436 53 4 5 chrUextra 562970 564554 -28440102 + HETA LINE telomeric 2786 4368 -1713 7 589 9111 17 53 0 chrUextra 564655 565898 -28438758 + NINJA_I LTR Pao 3413 4721 -1290 7 589 2614 22 127 0 chrUextra 565901 566217 -28438439 + Baggins1 LINE LOA 5083 5438 -15 7 589 1226 0 0 0 chrUextra 568023 568158 -28436498 - ACCORD_LTR LTR Gypsy -423 135 1 7 589 9412 10 30 0 chrUextra 568158 569601 -28435055 - ACCORD_I LTR Gypsy -2585 3703 2600 7 589 12968 16 2 22 chrUextra 569701 571274 -28433382 - BATUMI_I LTR Pao -5970 1993 452 7 589 12881 33 71 5 chrUextra 571375 572944 -28431712 - BATUMI_I LTR Pao -1903 6060 4389 7 589 434 69 0 0 chrUextra 573347 573405 -28431251 - DNAREP1_DM LINE Penelope -9 585 528 7 589 677 143 0 50 chrUextra 573405 573545 -28431111 - DNAREP1_DM LINE Penelope -263 331 199 7 589 371 129 67 56 chrUextra 573543 573633 -28431023 - DNAREP1_DM LINE Penelope -312 282 192 7 589 1211 97 44 17 chrUextra 573615 573865 -28430791 - DNAREP1_DM LINE Penelope -295 299 1 7 589 26 0 0 0 chrUextra 573927 573953 -28430703 + AT_rich Low_complexity Low_complexity 1 26 0 7 589 2367 157 68 57 chrUextra 573998 574539 -28430117 - HOBO DNA hAT -42 2974 2428 7 589 26 64 0 0 chrUextra 574558 574605 -28430051 + AT_rich Low_complexity Low_complexity 1 47 0 7 589 21 36 0 0 chrUextra 575290 575318 -28429338 + AT_rich Low_complexity Low_complexity 1 28 0 7 589 29 70 0 0 chrUextra 575386 575443 -28429213 + AT_rich Low_complexity Low_complexity 1 57 0 7 589 26 30 0 0 chrUextra 575483 575516 -28429140 + AT_rich Low_complexity Low_complexity 1 33 0 7 589 3925 50 24 0 chrUextra 575678 576178 -28428478 - PROTOP DNA P -3968 512 1 7 589 2864 96 0 37 chrUextra 576363 576818 -28427838 + S_DM DNA Tc1 1299 1736 0 7 589 1730 31 4 4 chrUextra 576818 577036 -28427620 + CIRCE LINE Composite 4493 4710 -1646 7 589 2652 51 6 6 chrUextra 577034 577367 -28427289 - R1_DM LINE R1 -5009 347 15 7 589 4704 33 2 0 chrUextra 577366 577910 -28426746 - R1_DM LINE R1 -551 4805 4261 7 589 2091 36 90 4 chrUextra 578010 578288 -28426368 - DOC3_DM LINE Jockey -3079 1661 1360 7 589 1551 270 21 19 chrUextra 578284 578770 -28425886 - BS2 LINE Jockey -1937 2784 2298 7 589 3444 66 152 0 chrUextra 578774 579374 -28425282 - BS3_DM LINE Jockey -759 1031 341 7 589 719 62 52 3 chrUextra 579410 579555 -28425101 - DOC3_DM LINE Jockey 0 4740 4452 7 589 11614 41 36 31 chrUextra 579655 581196 -28423460 + BATUMI_I LTR Pao 2313 3861 -4102 7 589 4551 41 70 5 chrUextra 581630 582212 -28422444 + DMCR1A LINE CR1 1082 1701 -2769 7 589 769 68 19 0 chrUextra 582199 582302 -28422354 + DMCR1A LINE CR1 4364 4468 -2 7 589 4099 44 62 0 chrUextra 582305 582833 -28421823 - Transib5 DNA Transib -591 2410 1850 7 589 32 86 0 0 chrUextra 583069 583150 -28421506 + AT_rich Low_complexity Low_complexity 1 81 0 7 589 3152 294 43 24 chrUextra 583276 584462 -28420194 + DMRT1A LINE R1 711 1919 -3264 7 589 3170 13 5 18 chrUextra 584563 584944 -28419712 + FW_DM LINE Jockey 4316 4691 -1 7 589 5435 85 15 6 chrUextra 584931 585754 -28418902 + MDG1_I LTR Gypsy 5454 6666 -231 7 589 193 29 29 29 chrUextra 585754 585789 -28418867 + (TA)n Simple_repeat Simple_repeat 1 35 0 7 589 1684 258 65 39 chrUextra 585789 585928 -28418728 + MDG1_I LTR Gypsy 6667 6799 -98 7 589 1329 25 0 0 chrUextra 585932 586093 -28418563 + (TAA)n Simple_repeat Simple_repeat 3 163 0 7 589 192 245 0 0 chrUextra 586645 586698 -28417958 + (CACCAT)n Simple_repeat Simple_repeat 4 56 0 7 589 1952 14 0 0 chrUextra 587822 588035 -28416621 + R1_DM LINE R1 5144 5356 0 7 589 4708 65 20 3 chrUextra 588068 588671 -28415985 + R1_DM LINE R1 1 613 -4743 7 589 5633 44 12 1 chrUextra 588669 589350 -28415306 + R1_DM LINE R1 1019 1706 -3650 7 589 7845 189 28 7 chrUextra 589451 590966 -28413690 + TAHRE LINE telomeric 621 2168 -8295 7 589 2094 0 0 4 chrUextra 591066 591294 -28413362 + Gypsy4_I LTR Gypsy 6062 6288 0 7 589 2324 45 3 37 chrUextra 591294 591591 -28413065 + Gypsy4_LTR LTR Gypsy 1 287 0 7 589 1295 200 8 0 chrUextra 591814 592064 -28412592 + Gypsy_I LTR Gypsy 5968 6219 -288 7 589 1315 205 48 64 chrUextra 592066 592503 -28412153 + Gypsy_LTR LTR Gypsy 33 462 -20 7 589 1309 62 124 0 chrUextra 592680 592857 -28411799 - MDG1_LTR LTR Gypsy -150 292 94 7 589 372 88 0 0 chrUextra 592859 592916 -28411740 + (TTA)n Simple_repeat Simple_repeat 3 59 0 7 589 915 86 56 21 chrUextra 592944 593087 -28411569 + DM176_I LTR Gypsy 2360 2507 -3913 7 589 6389 105 31 11 chrUextra 593094 594041 -28410615 + DM176_I LTR Gypsy 2641 3606 -2814 7 589 633 172 9 0 chrUextra 594069 594185 -28410471 + DM176_I LTR Gypsy 3704 3820 -2600 7 589 12253 16 12 1 chrUextra 594285 595677 -28408979 - DMRT1B LINE R1 -1873 3310 1903 7 589 519 0 108 0 chrUextra 595678 595789 -28408867 + (GTCTG)n Simple_repeat Simple_repeat 5 127 0 7 589 5274 144 65 27 chrUextra 595889 596617 -28408039 + TART LINE telomeric 4907 5644 -8833 7 589 180 111 0 0 chrUextra 596617 596644 -28408012 + (CAG)n Simple_repeat Simple_repeat 3 29 0 7 589 5274 144 65 27 chrUextra 596644 596886 -28407770 + TART LINE telomeric 5645 5914 -8563 7 589 3987 48 2 22 chrUextra 596885 597392 -28407264 + TART LINE telomeric 2952 3448 -11029 7 589 11592 31 4 3 chrUextra 597492 598992 -28405664 + GTWIN_I LTR Gypsy 5186 7129 -393 7 589 222 151 13 27 chrUextra 599175 599250 -28405406 + (TTTA)n Simple_repeat Simple_repeat 4 77 0 7 589 417 229 18 18 chrUextra 600037 600148 -28404508 + Ulysses_I LTR Gypsy 1952 2062 -4319 7 589 4364 14 0 16 chrUextra 600690 601180 -28403476 - Gypsy12_I LTR Gypsy -354 5192 4711 7 589 8585 18 38 1 chrUextra 601177 602186 -28402470 - Gypsy12_I LTR Gypsy -1185 4361 3316 7 589 3702 194 30 19 chrUextra 602290 603750 -28400906 + SAR_DM Satellite Satellite 1 1475 -203 7 589 3160 39 5 38 chrUextra 603883 604450 -28400206 + PROTOP_A DNA P 570 1105 0 7 589 1322 323 7 11 chrUextra 604470 605023 -28399633 - Gypsy4_I LTR Gypsy -5106 1182 495 7 589 22 0 0 0 chrUextra 605254 605276 -28399380 + AT_rich Low_complexity Low_complexity 1 22 0 7 589 8434 22 6 2 chrUextra 605464 606452 -28398204 - PROTOP_A DNA P -113 992 1 7 589 4167 22 4 18 chrUextra 606452 606950 -28397706 - CIRCE LINE Composite -3926 2430 1940 7 589 1846 5 0 0 chrUextra 607050 607249 -28397407 + Gypsy4_I LTR Gypsy 6090 6288 0 7 589 2524 18 7 0 chrUextra 607249 607534 -28397122 + Gypsy4_LTR LTR Gypsy 1 287 0 7 589 1669 19 0 5 chrUextra 607534 607740 -28396916 - PROTOP_A DNA P -252 853 649 7 589 3219 41 36 2 chrUextra 607736 608155 -28396501 - PROTOP_B DNA P -562 591 159 7 589 1217 117 152 107 chrUextra 608152 608515 -28396141 + MAX_I LTR Pao 976 1354 -6560 7 589 23 0 0 0 chrUextra 609032 609055 -28395601 + AT_rich Low_complexity Low_complexity 1 23 0 7 589 803 306 49 37 chrUextra 609181 609290 -28395366 - Gypsy4_I LTR Gypsy -3214 2953 2820 7 589 1496 34 48 0 chrUextra 609290 609498 -28395158 - TLD2 Unknown Unknown 0 218 1 7 589 803 306 49 37 chrUextra 609498 609953 -28394703 - Gypsy4_I LTR Gypsy -3214 2819 2255 7 589 12360 28 24 8 chrUextra 610217 611690 -28392966 - DMCR1A LINE CR1 -1024 3446 1950 7 589 31 58 0 0 chrUextra 611840 611892 -28392764 + AT_rich Low_complexity Low_complexity 1 52 0 7 589 3379 40 0 2 chrUextra 611944 612344 -28392312 - STALKER4_LTR LTR Gypsy -3 399 1 7 589 8001 22 14 1 chrUextra 612344 613260 -28391396 + R1_DM LINE R1 4390 5317 -39 7 589 1688 318 66 47 chrUextra 613424 614829 -28389827 - HMSBEAGLE_I LTR Gypsy -1578 4951 3520 7 589 4629 6 6 0 chrUextra 614929 615478 -28389178 + ROVER-I_DM LTR Gypsy 6033 6584 0 7 589 1465 126 65 116 chrUextra 615478 615865 -28388791 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 589 3684 44 2 9 chrUextra 615865 616397 -28388259 - PROTOP DNA P -3699 781 316 7 589 4450 225 74 52 chrUextra 616497 617951 -28386705 - Gypsy12_LTR LTR Gypsy -797 1539 55 7 589 5232 31 2 2 chrUextra 618064 618682 -28385974 - R1_DM LINE R1 -1350 4006 3389 7 589 7122 35 28 1 chrUextra 618680 619531 -28385125 - R1_DM LINE R1 -3237 2119 1246 7 589 13419 5 0 4 chrUextra 619631 621095 -28383561 - CIRCE LINE Composite -2493 3863 2406 7 589 6601 141 46 35 chrUextra 621195 622485 -28382171 - TART LINE telomeric -3843 10634 9331 7 589 361 216 44 44 chrUextra 622478 622638 -28382018 - TAHRE LINE telomeric -2993 7470 7311 7 589 12625 26 25 0 chrUextra 622756 624216 -28380440 + DMCR1A LINE CR1 2750 4245 -225 7 589 9714 15 2 0 chrUextra 624348 625451 -28379205 + PROTOP_A DNA P 1 1105 0 7 589 664 131 145 16 chrUextra 625501 625625 -28379031 - DNAREP1_DM LINE Penelope -128 466 327 7 589 554 181 19 9 chrUextra 625658 625764 -28378892 - Invader3_I LTR Gypsy -4068 820 714 7 589 4684 112 22 45 chrUextra 625875 626690 -28377966 + Gypsy8_I LTR Gypsy 1035 1728 -2619 7 589 477 133 9 37 chrUextra 626674 626783 -28377873 - DMSAT6 Satellite Satellite -138 332 227 7 589 3744 30 2 0 chrUextra 626888 627325 -28377331 + DMCR1A LINE CR1 2096 2533 -1937 7 589 5794 0 2 2 chrUextra 627430 628055 -28376601 - BS2 LINE Jockey -4086 635 11 7 589 405 70 18 0 chrUextra 629421 629478 -28375178 + BARI1 DNA Tc1 37 94 -1656 7 589 897 112 60 42 chrUextra 629479 629646 -28375010 - Gypsy12A_LTR LTR Gypsy -1695 585 416 7 589 1045 136 36 25 chrUextra 629717 630095 -28374561 + I_DM LINE I 4172 4450 -1781 7 589 2845 27 26 6 chrUextra 630096 630436 -28374220 + DMCR1A LINE CR1 1292 1638 -2832 7 589 4517 25 25 2 chrUextra 632087 632637 -28372019 + IDEFIX_LTR LTR Gypsy 32 594 0 7 589 25 0 0 0 chrUextra 632845 632870 -28371786 + AT_rich Low_complexity Low_complexity 1 25 0 7 589 3196 36 0 10 chrUextra 633140 633533 -28371123 + IDEFIX_I LTR Gypsy 1 389 -5239 7 589 1245 41 198 0 chrUextra 633633 633926 -28370730 + DMRT1A LINE R1 2985 3335 -1848 7 589 3507 34 5 0 chrUextra 633918 634332 -28370324 + DMRT1A LINE R1 4451 4866 -317 7 589 645 38 0 0 chrUextra 634328 634408 -28370248 + DMRT1A LINE R1 5094 5173 -10 7 589 1093 15 0 0 chrUextra 634409 634540 -28370116 + DOC3_DM LINE Jockey 620 750 -3990 7 589 939 39 7 59 chrUextra 634544 634679 -28369977 + DMCR1A LINE CR1 239 366 -4104 7 589 3368 42 12 5 chrUextra 634673 635077 -28369579 + DMCR1A LINE CR1 664 1070 -3400 7 589 2537 110 36 31 chrUextra 635177 636007 -28368649 + DMSAT6 Satellite Satellite 1 833 -92 7 589 2730 99 14 24 chrUextra 636026 636619 -28368037 + DMSAT6 Satellite Satellite 1 586 -1 7 589 3366 59 25 5 chrUextra 636721 637162 -28367494 + BATUMI_I LTR Pao 7514 7963 0 7 589 1534 47 0 30 chrUextra 637184 637383 -28367273 + BATUMI_LTR LTR Pao 32 224 -48 7 589 2627 44 6 0 chrUextra 637381 637698 -28366958 + STALKER4_LTR LTR Gypsy 61 379 -23 7 589 25 0 0 0 chrUextra 637858 637883 -28366773 + AT_rich Low_complexity Low_complexity 1 25 0 7 589 1157 206 4 4 chrUextra 637907 638160 -28366496 + Stalker2_I LTR Gypsy 291 543 -6859 7 589 7210 40 1 1 chrUextra 638262 639116 -28365540 - R1_DM LINE R1 -3667 1689 836 7 589 2571 90 161 20 chrUextra 639092 639575 -28365081 - R1_DM LINE R1 -4761 595 1 7 589 462 55 0 0 chrUextra 639575 639630 -28365026 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 7 589 564 28 0 0 chrUextra 639626 639697 -28364959 - R2_DM LINE R2 -4 3603 3533 7 589 12271 34 2 1 chrUextra 639797 641226 -28363430 + DMCR1A LINE CR1 1140 2569 -1901 7 589 364 113 0 19 chrUextra 642856 642910 -28361746 - BS2 LINE Jockey -4419 302 250 7 589 400 267 19 19 chrUextra 642916 643023 -28361633 - GTWIN_I LTR Gypsy -4769 1652 1546 7 589 2836 189 177 18 chrUextra 643112 643835 -28360821 - GTWIN_I LTR Gypsy -5149 1272 435 7 589 22 0 0 0 chrUextra 643944 643966 -28360690 + AT_rich Low_complexity Low_complexity 1 22 0 7 589 26 88 0 0 chrUextra 644008 644076 -28360580 + AT_rich Low_complexity Low_complexity 1 68 0 7 589 234 205 229 0 chrUextra 644161 644244 -28360412 - Gypsy_I LTR Gypsy -6405 102 1 7 589 6348 16 1 0 chrUextra 644382 645112 -28359544 - PROTOP_A DNA P -374 731 1 7 589 557 43 0 0 chrUextra 645112 645181 -28359475 - DOC3_DM LINE Jockey -2994 1746 1678 7 589 922 18 0 9 chrUextra 645181 645293 -28359363 - TRANSIB2 DNA Transib 0 2844 2734 7 589 4186 41 35 8 chrUextra 645289 645806 -28358850 - DOC3_DM LINE Jockey -1454 3286 2756 7 589 1565 104 50 11 chrUextra 645906 646187 -28358469 - DMSAT6 Satellite Satellite -48 422 131 7 589 2623 84 15 45 chrUextra 646198 646670 -28357986 - DMSAT6 Satellite Satellite -4 466 9 7 589 2446 112 42 17 chrUextra 646688 647327 -28357329 - DMSAT6 Satellite Satellite -3 655 1 7 589 9791 66 34 5 chrUextra 647428 648849 -28355807 + DMCR1A LINE CR1 2303 4083 -387 7 589 1705 30 5 0 chrUextra 648949 649148 -28355508 - PROTOP_B DNA P -953 200 1 7 589 3327 55 29 0 chrUextra 649149 649565 -28355091 + DOC3_DM LINE Jockey 3065 3492 -1248 7 589 4067 37 39 0 chrUextra 649550 650040 -28354616 + DMCR1A LINE CR1 3962 4470 0 7 589 2864 21 3 3 chrUextra 650038 650369 -28354287 + DOC3_DM LINE Jockey 811 1141 -3599 7 589 4335 77 22 25 chrUextra 650610 651470 -28353186 - PROTOP_A DNA P 0 1153 297 7 589 293 188 0 0 chrUextra 651470 651534 -28353122 - Gypsy8_I LTR Gypsy -4054 293 230 7 589 246 185 18 18 chrUextra 651739 651794 -28352862 - Gypsy8_LTR LTR Gypsy -248 56 2 7 589 467 90 0 0 chrUextra 651987 652095 -28352561 - RSP Satellite Satellite -54 108 1 7 589 830 143 7 19 chrUextra 652135 652686 -28351970 - RSP Satellite Satellite -1 544 1 7 589 6452 13 3 10 chrUextra 652679 653400 -28351256 - Gypsy2_I LTR Gypsy -1085 5050 4335 7 589 366 362 43 45 chrUextra 653528 653904 -28350752 + BS LINE Jockey 465 839 -4287 7 589 343 169 39 0 chrUextra 654002 654079 -28350577 + BS LINE Jockey 973 1052 -4074 7 589 1221 313 31 10 chrUextra 654132 654619 -28350037 + BS LINE Jockey 1165 1661 -3465 7 589 2373 29 0 7 chrUextra 655009 655284 -28349372 + R1_DM LINE R1 5084 5356 0 7 73 8814 55 11 2 chrUextra 655317 656416 -28348240 + R1_DM LINE R1 1 1109 -4247 7 590 5878 146 41 106 chrUextra 656517 657894 -28346762 + TART LINE telomeric 5744 7031 -7446 7 590 5643 11 3 3 chrUextra 658025 658658 -28345998 - LSU-rRNA_Dme rRNA rRNA -2443 1457 825 7 590 1269 0 0 0 chrUextra 658663 658800 -28345856 - LSU-rRNA_Dme rRNA rRNA -3763 137 1 7 590 21 95 0 0 chrUextra 658812 658875 -28345781 + AT_rich Low_complexity Low_complexity 1 63 0 7 590 28 29 0 0 chrUextra 658901 658936 -28345720 + AT_rich Low_complexity Low_complexity 1 35 0 7 590 12458 10 28 1 chrUextra 659528 660929 -28343727 + Gypsy4_I LTR Gypsy 905 2342 -3946 7 590 8604 37 7 0 chrUextra 661029 662038 -28342618 + DMCR1A LINE CR1 3455 4470 0 7 590 871 54 0 9 chrUextra 662113 662225 -28342431 + ROOA_I LTR Pao 6730 6840 -9 7 590 1386 256 54 19 chrUextra 662528 663271 -28341385 + QUASIMODO_I LTR Gypsy 5186 6060 0 7 590 247 79 0 116 chrUextra 663271 663314 -28341342 + QUASIMODO_LTR LTR Gypsy 1 38 -620 7 590 204 40 0 0 chrUextra 663314 663339 -28341317 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 590 4862 38 0 0 chrUextra 663348 663927 -28340729 + DMRT1B LINE R1 3885 4463 -720 7 590 5550 22 0 3 chrUextra 664027 664664 -28339992 - DMRT1A LINE R1 -4348 835 201 7 590 189 72 108 0 chrUextra 664685 664768 -28339888 + (GTCTG)n Simple_repeat Simple_repeat 1 92 0 7 590 591 56 0 0 chrUextra 664788 664860 -28339796 + DMRT1A LINE R1 2623 2694 -2489 7 590 5185 7 0 0 chrUextra 664858 665426 -28339230 + DMRT1A LINE R1 2807 3374 -1809 7 590 271 278 34 26 chrUextra 666561 666767 -28337889 + DM297_I LTR Gypsy 2372 2443 -3724 7 590 550 234 138 0 chrUextra 666779 666924 -28337732 + Gypsy4_I LTR Gypsy 2521 2685 -3603 7 590 5641 42 26 18 chrUextra 667024 667749 -28336907 - R1_DM LINE R1 -3897 1459 729 7 590 2992 68 5 5 chrUextra 667736 668123 -28336533 - R1_DM LINE R1 -4969 387 1 7 590 2380 23 0 0 chrUextra 668156 668421 -28336235 - R1_DM LINE R1 0 5356 5092 7 590 3419 16 5 0 chrUextra 668521 668907 -28335749 - PROTOP_A DNA P -717 388 1 7 590 243 214 100 0 chrUextra 669047 669117 -28335539 + Gypsy9_I LTR Gypsy 1501 1577 -3100 7 590 1883 280 50 13 chrUextra 669214 669898 -28334758 + Gypsy4_I LTR Gypsy 2608 3316 -2972 7 590 10739 69 0 17 chrUextra 670013 671405 -28333251 - Gypsy10_I LTR Gypsy -2258 3020 1653 7 590 384 199 7 26 chrUextra 671564 671697 -28332959 - FW3_DM LINE Jockey -1510 1622 1526 7 590 922 179 46 7 chrUextra 671697 671926 -28332730 - DOC4_DM LINE Jockey -914 1877 1735 7 590 431 266 8 8 chrUextra 672549 672674 -28331982 - DIVER2_I LTR Pao -497 3650 3526 7 590 546 169 115 28 chrUextra 673023 673205 -28331451 + Gypsy12A_LTR LTR Gypsy 677 874 -1406 7 590 2224 176 136 147 chrUextra 673372 674382 -28330274 + Gypsy12A_LTR LTR Gypsy 967 1965 -315 7 590 6127 12 1 9 chrUextra 674482 675180 -28329476 - CIRCE LINE Composite -2122 4234 3542 7 590 5561 31 12 25 chrUextra 675177 675869 -28328787 - CIRCE LINE Composite -3499 2857 2175 7 590 293 174 70 102 chrUextra 676324 676452 -28328204 - BS LINE Jockey -4967 159 36 7 590 488 113 0 0 chrUextra 676455 676526 -28328130 + DMCR1A LINE CR1 2526 2596 -1874 7 590 1119 131 84 42 chrUextra 676530 676745 -28327911 + DMCR1A LINE CR1 2771 2994 -1476 7 590 1034 113 7 0 chrUextra 676739 676889 -28327767 + DMCR1A LINE CR1 3247 3397 -1073 7 590 1149 122 23 60 chrUextra 677136 677353 -28327303 - DNAREP1_DM LINE Penelope -5 589 381 7 590 12047 18 12 0 chrUextra 677453 678835 -28325821 + STALKER4_I LTR Gypsy 3799 5196 -1334 7 590 1667 174 41 3 chrUextra 678935 679379 -28325277 - BS3_DM LINE Jockey -1545 245 1 7 590 1408 146 23 15 chrUextra 679380 679644 -28325012 - MDG1_LTR LTR Gypsy -30 412 147 7 590 1547 83 33 8 chrUextra 679639 679882 -28324774 - DM297_I LTR Gypsy -3212 2955 2707 7 590 2624 111 14 24 chrUextra 679890 680316 -28324340 - DM297_I LTR Gypsy -3376 2791 2370 7 590 1604 36 35 15 chrUextra 680416 680613 -28324043 - PROTOP_B DNA P -952 201 1 7 590 52 30 0 0 chrUextra 680947 681013 -28323643 + AT_rich Low_complexity Low_complexity 1 66 0 7 590 7464 37 25 1 chrUextra 681896 682788 -28321868 + R1_DM LINE R1 867 1779 -3577 7 590 2991 18 125 4 chrUextra 682788 683276 -28321380 + R1_DM LINE R1 1974 2520 -2836 7 590 5443 22 0 0 chrUextra 683376 683998 -28320658 - FW_DM LINE Jockey -1610 3082 2461 7 590 6500 26 0 1 chrUextra 683996 684755 -28319901 - FW_DM LINE Jockey -2506 2186 1429 7 590 6876 26 21 0 chrUextra 684855 685657 -28318999 - FW_DM LINE Jockey -800 3892 3074 7 590 2464 21 3 0 chrUextra 685661 685951 -28318705 - FW_DM LINE Jockey -1802 2890 2600 7 590 2438 25 3 0 chrUextra 685950 686232 -28318424 - FW_DM LINE Jockey -2499 2193 1911 7 590 1518 108 126 96 chrUextra 686533 686878 -28317778 + STALKER4_LTR LTR Gypsy 69 372 0 7 590 251 253 11 11 chrUextra 686994 687082 -28317574 + Invader2_I LTR Gypsy 4322 4409 -183 7 590 5411 138 21 83 chrUextra 687829 689183 -28315473 + HETA LINE telomeric 1 1134 -4947 7 590 2565 84 8 29 chrUextra 689283 689661 -28314995 - HETA LINE telomeric -3811 2270 1901 7 590 1527 61 0 25 chrUextra 689649 689851 -28314805 - HETA LINE telomeric -4519 1562 1366 7 590 5343 88 62 24 chrUextra 689847 690654 -28314002 - TART LINE telomeric -3916 10561 9724 7 590 227 247 62 0 chrUextra 690755 690836 -28313820 + TOM_I LTR Gypsy 5843 5928 -184 7 590 1934 52 40 4 chrUextra 690865 691116 -28313540 - DMTOM1_LTR LTR Gypsy -150 260 1 7 590 433 258 32 53 chrUextra 691114 691302 -28313354 - DM176_I LTR Gypsy 0 6420 6237 7 590 11708 28 4 0 chrUextra 692226 693595 -28311061 - DMRT1A LINE R1 -3259 1924 550 7 590 12555 7 0 0 chrUextra 693702 695063 -28309593 - TART LINE telomeric -885 13592 12232 7 590 1289 148 0 37 chrUextra 695163 695381 -28309275 + BS3_DM LINE Jockey 1771 1980 -2741 7 590 322 312 0 0 chrUextra 695385 695481 -28309175 + BS3_DM LINE Jockey 2088 2183 -2538 7 590 406 212 0 0 chrUextra 695513 695593 -28309063 + BS3_DM LINE Jockey 2866 2945 -1776 7 590 2504 44 183 0 chrUextra 695591 696189 -28308467 + BS3_DM LINE Jockey 101 807 -983 7 590 921 84 122 5 chrUextra 696178 696325 -28308331 + BS3_DM LINE Jockey 1191 1333 -457 7 590 1538 85 14 5 chrUextra 696318 696531 -28308125 + BS3_DM LINE Jockey 1539 1753 -37 7 590 788 33 0 0 chrUextra 696631 696721 -28307935 + R1_DM LINE R1 5267 5356 0 7 590 3254 76 5 7 chrUextra 696754 697190 -28307466 + R1_DM LINE R1 1 435 -4921 7 590 6883 38 1 1 chrUextra 697185 697995 -28306661 + R1_DM LINE R1 1101 1910 -3446 7 590 226 307 88 88 chrUextra 699783 700022 -28304634 + Gypsy12_I LTR Gypsy 1681 1919 -3627 7 590 785 325 6 23 chrUextra 700560 700907 -28303749 + Gypsy12_I LTR Gypsy 2947 3287 -2259 7 590 3576 5 0 0 chrUextra 701026 701421 -28303235 - Stalker2_LTR LTR Gypsy -29 395 1 7 590 1057 142 0 33 chrUextra 701421 701603 -28303053 + Gypsy12_LTR LTR Gypsy 2161 2336 0 7 590 2401 153 137 0 chrUextra 701603 702089 -28302567 - FW_DM LINE Jockey -3430 1262 710 7 590 23 33 0 0 chrUextra 702357 702387 -28302269 + AT_rich Low_complexity Low_complexity 1 30 0 7 590 2749 35 143 9 chrUextra 702490 702931 -28301725 + TRANSIB3 DNA Transib 807 1306 -1577 7 590 556 29 0 0 chrUextra 702940 703008 -28301648 + TRANSIB3 DNA Transib 2392 2459 -424 7 590 1080 85 147 4 chrUextra 703020 703245 -28301411 + TRANSIB3 DNA Transib 2624 2880 -3 7 590 512 263 78 35 chrUextra 703311 703543 -28301113 + Copia_I LTR Copia 3486 3727 -866 7 590 709 246 87 28 chrUextra 703554 703843 -28300813 + Copia_I LTR Copia 3819 4124 -469 7 590 2633 164 62 88 chrUextra 703949 704765 -28299891 - HETA LINE telomeric -5192 889 95 7 590 3834 84 18 26 chrUextra 704763 705310 -28299346 - TART LINE telomeric -3814 10663 10121 7 590 25 31 0 0 chrUextra 705924 705956 -28298700 + AT_rich Low_complexity Low_complexity 1 32 0 7 590 634 110 28 0 chrUextra 706227 706336 -28298320 + PROTOP_B DNA P 201 312 -841 7 590 230 59 59 0 chrUextra 706352 706386 -28298270 - DNAREP1_DM LINE Penelope -363 231 196 7 590 4387 165 93 31 chrUextra 706870 707823 -28296833 + STALKER4_I LTR Gypsy 1209 2220 -4310 7 590 291 56 0 0 chrUextra 707811 707847 -28296809 + Stalker2_I LTR Gypsy 2628 2663 -4739 7 590 1551 96 37 8 chrUextra 707849 708090 -28296566 + STALKER4_I LTR Gypsy 2617 2864 -3666 7 590 982 73 7 21 chrUextra 708089 708229 -28296427 - Gypsy6A_LTR LTR Gypsy -70 350 213 7 590 4365 182 26 22 chrUextra 708334 709688 -28294968 + Gypsy2_I LTR Gypsy 1549 2916 -4096 7 590 6568 28 57 1 chrUextra 709788 711147 -28293509 - R1_DM LINE R1 -1294 4062 2526 7 590 10097 63 7 5 chrUextra 711247 712522 -28292134 + R1_DM LINE R1 960 2237 -3119 7 590 214 174 0 0 chrUextra 713947 713993 -28290663 + A-rich Low_complexity Low_complexity 1 46 0 7 590 5674 5 10 0 chrUextra 714164 714789 -28289867 + Copia2_I LTR Copia 615 1245 -2917 7 590 445 113 0 0 chrUextra 714793 714855 -28289801 - BS3_DM LINE Jockey -755 1035 974 7 590 2364 244 88 13 chrUextra 714890 715517 -28289139 - BS2 LINE Jockey -2195 2526 1853 7 590 5579 33 45 0 chrUextra 715619 716304 -28288352 + NINJA_I LTR Pao 4466 5181 -830 7 590 5643 28 1 12 chrUextra 716298 716974 -28287682 + NINJA_I LTR Pao 1614 2282 -3729 7 590 304 289 11 0 chrUextra 718577 718667 -28285989 - BATUMI_I LTR Pao -1707 6256 6166 7 590 1024 305 95 17 chrUextra 719110 719520 -28285136 - DIVER2_I LTR Pao -274 3873 3432 7 590 272 243 14 0 chrUextra 719523 719593 -28285063 - DIVER2_I LTR Pao -1019 3128 3058 7 590 797 282 8 27 chrUextra 719622 719881 -28284775 + BS LINE Jockey 2019 2272 -2854 7 590 12546 5 0 0 chrUextra 719981 721332 -28283324 + Gypsy_I LTR Gypsy 3060 4410 -2097 7 590 294 119 0 243 chrUextra 721433 721544 -28283112 + Gypsy2_I LTR Gypsy 595 678 -5457 7 590 21 0 0 0 chrUextra 721849 721870 -28282786 + AT_rich Low_complexity Low_complexity 1 21 0 7 590 362 194 0 0 chrUextra 722065 722132 -28282524 + IDEFIX_I LTR Gypsy 1 67 -5561 7 590 1440 186 236 48 chrUextra 722146 722783 -28281873 + IDEFIX_I LTR Gypsy 234 990 -4638 7 590 3152 11 18 50 chrUextra 722883 723266 -28281390 + Gypsy12_LTR LTR Gypsy 1966 2336 0 7 590 831 194 1 0 chrUextra 723804 723961 -28280695 + Gypsy3_I LTR Gypsy 1398 1534 -4643 7 590 1707 284 30 17 chrUextra 724336 724912 -28279744 - TOM_I LTR Gypsy -920 5192 4610 7 590 3918 197 27 5 chrUextra 724895 725681 -28278975 - TOM_I LTR Gypsy -2864 3248 2446 7 590 12148 6 1 0 chrUextra 725781 727129 -28277527 - HETA LINE telomeric -1692 4389 3040 7 590 4582 27 94 0 chrUextra 727229 727783 -28276873 + R1_DM LINE R1 4086 4691 -665 7 590 1248 62 151 6 chrUextra 727773 727952 -28276704 + R1_DM LINE R1 5034 5238 -118 7 590 1343 73 0 17 chrUextra 727935 728116 -28276540 + R1_DM LINE R1 224 401 -4955 7 590 3577 36 60 2 chrUextra 728127 728577 -28276079 + R1_DM LINE R1 721 1196 -4160 7 590 5623 45 22 0 chrUextra 728677 729358 -28275298 + Baggins1 LINE LOA 4443 5138 -315 7 590 26 0 0 0 chrUextra 730914 730940 -28273716 + AT_rich Low_complexity Low_complexity 1 26 0 7 590 428 137 58 44 chrUextra 731569 731706 -28272950 + NTS_DM Other Other 102 240 0 7 590 276 146 21 0 chrUextra 731706 731754 -28272902 + NTS_DM Other Other 1 49 -191 7 590 1159 137 30 22 chrUextra 731852 732083 -28272573 + NTS_DM Other Other 8 240 0 7 590 303 104 21 0 chrUextra 732083 732131 -28272525 + NTS_DM Other Other 1 49 -191 7 590 1128 133 0 5 chrUextra 732212 732409 -28272247 + NTS_DM Other Other 1 196 -44 7 590 293 125 21 0 chrUextra 732499 732547 -28272109 + NTS_DM Other Other 1 49 -191 7 590 1079 155 34 21 chrUextra 732631 732868 -28271788 + NTS_DM Other Other 1 240 0 7 590 287 109 22 0 chrUextra 732868 732914 -28271742 + NTS_DM Other Other 1 47 -193 7 590 3582 14 5 0 chrUextra 733014 733452 -28271204 + Invader2_I LTR Gypsy 4153 4592 0 7 590 2268 26 0 19 chrUextra 733452 733723 -28270933 + Invader2_LTR LTR Gypsy 1 266 0 7 590 2234 246 8 14 chrUextra 733723 734352 -28270304 + IDEFIX_I LTR Gypsy 2050 2674 -2954 7 590 5816 48 87 0 chrUextra 734458 735215 -28269441 - Baggins1 LINE LOA -601 4852 4030 7 590 1756 188 129 0 chrUextra 735216 735573 -28269083 - GTWIN_I LTR Gypsy -1969 4452 4050 7 590 662 69 0 0 chrUextra 735572 735659 -28268997 - BS3_DM LINE Jockey 0 1790 1704 7 590 1123 63 7 0 chrUextra 735658 735800 -28268856 - BS3_DM LINE Jockey -633 1157 1015 7 590 6100 16 27 0 chrUextra 735900 737240 -28267416 - FW_DM LINE Jockey -551 4141 2766 7 590 10716 47 42 6 chrUextra 737340 738678 -28265978 - Baggins1 LINE LOA -598 4855 3470 7 590 1844 24 5 0 chrUextra 738784 738995 -28265661 - R1_DM LINE R1 -571 4785 4574 7 590 6078 32 1 1 chrUextra 738992 739702 -28264954 - R1_DM LINE R1 -1121 4235 3526 7 590 3698 21 0 0 chrUextra 739696 740119 -28264537 - R1_DM LINE R1 -2231 3125 2703 7 590 9551 33 3 1 chrUextra 740219 741328 -28263328 + G5_DM LINE Jockey 760 1870 -2986 7 590 2197 20 0 0 chrUextra 741307 741558 -28263098 + G5_DM LINE Jockey 2604 2854 -2002 7 590 1821 95 154 32 chrUextra 741658 741996 -28262660 - FW3_DM LINE Jockey -2659 473 95 7 590 489 137 248 8 chrUextra 742357 742482 -28262174 - DMCR1A LINE CR1 -51 4419 4265 7 590 23 68 0 0 chrUextra 742881 742925 -28261731 + AT_rich Low_complexity Low_complexity 1 44 0 7 590 1476 12 0 6 chrUextra 743097 743266 -28261390 + Gypsy4_I LTR Gypsy 6120 6287 -1 7 590 2501 28 3 0 chrUextra 743267 743553 -28261103 + Gypsy4_LTR LTR Gypsy 1 287 0 7 590 1077 176 96 149 chrUextra 743629 744004 -28260652 - DNAREP1_DM LINE Penelope -68 526 172 7 590 943 298 64 6 chrUextra 744022 744349 -28260307 + Gypsy3_I LTR Gypsy 5374 5719 -458 7 590 286 302 12 0 chrUextra 744563 744649 -28260007 - Gypsy_DS LTR Gypsy -6048 1474 1388 7 590 318 224 11 34 chrUextra 744730 744818 -28259838 - Gypsy6_LTR LTR Gypsy -168 239 154 7 590 23 54 0 0 chrUextra 745507 745544 -28259112 + AT_rich Low_complexity Low_complexity 1 37 0 7 590 12086 1 0 0 chrUextra 745973 747310 -28257346 - TABOR_I LTR Gypsy -636 5700 4364 7 590 9304 112 1 1 chrUextra 747413 748744 -28255912 + HETA LINE telomeric 1858 3188 -2893 7 590 9878 30 66 35 chrUextra 748846 750174 -28254482 + Gypsy12_LTR LTR Gypsy 607 1976 -360 7 590 7374 54 19 2 chrUextra 750274 751188 -28253468 - DMRT1A LINE R1 -4254 929 1 7 590 3465 41 0 0 chrUextra 751190 751604 -28253052 - DOC3_DM LINE Jockey -4110 630 217 7 590 9920 12 38 1 chrUextra 751707 752908 -28251748 + STALKER4_I LTR Gypsy 5285 6530 0 7 590 1029 24 0 0 chrUextra 752908 753033 -28251623 + STALKER4_LTR LTR Gypsy 1 125 -277 7 590 3463 5 0 0 chrUextra 753133 753513 -28251143 - MDG3_I LTR Gypsy -4606 380 1 7 590 2448 4 0 0 chrUextra 753512 753779 -28250877 - MDG3_LTR LTR Gypsy 0 267 1 7 590 1836 270 37 19 chrUextra 753783 754462 -28250194 + ROVER-I_DM LTR Gypsy 696 1386 -5198 7 590 395 311 13 7 chrUextra 754677 754829 -28249827 - NOMAD_I LTR Gypsy -1528 5044 4892 7 590 717 329 9 12 chrUextra 754855 755175 -28249481 - NOMAD_I LTR Gypsy -1770 4802 4484 7 590 335 275 156 21 chrUextra 755356 755497 -28249159 - NOMAD_I LTR Gypsy -2872 3700 3541 7 590 996 250 114 12 chrUextra 755517 755841 -28248815 - NOMAD_I LTR Gypsy -3182 3390 3034 7 590 878 53 0 17 chrUextra 756015 756130 -28248526 - CIRCE LINE Composite -5271 1085 973 7 590 6997 65 52 7 chrUextra 756272 757200 -28247456 - CIRCE LINE Composite -5386 970 1 7 590 661 48 0 12 chrUextra 757227 757311 -28247345 - CIRCE LINE Composite -79 6277 6195 7 590 397 21 21 0 chrUextra 757419 757466 -28247190 - Gypsy2_I LTR Gypsy -6087 48 1 7 590 3249 11 0 0 chrUextra 757466 757819 -28246837 - Gypsy2_LTR LTR Gypsy 0 353 1 7 590 341 247 26 79 chrUextra 757823 758012 -28246644 + Gypsy11_LTR LTR Gypsy 110 288 -164 7 590 1453 193 135 5 chrUextra 758047 758432 -28246224 + FW_DM LINE Jockey 357 791 -3901 7 590 310 28 0 0 chrUextra 758433 758469 -28246187 + FW_DM LINE Jockey 4323 4358 -334 7 590 2015 47 8 45 chrUextra 758469 758737 -28245919 + BLOOD_LTR LTR Gypsy 1 258 -141 7 590 813 96 233 0 chrUextra 759318 759464 -28245192 + FB4_DM DNA Tc1 3 182 -3907 7 590 4707 24 61 80 chrUextra 759497 760172 -28244484 + PROTOP_A DNA P 1 662 -443 7 590 356 362 12 4 chrUextra 760599 760843 -28243813 - BURDOCK_I LTR Gypsy -4878 982 737 7 590 30 27 0 0 chrUextra 761540 761577 -28243079 + AT_rich Low_complexity Low_complexity 1 37 0 7 590 1915 43 9 0 chrUextra 761695 761926 -28242730 - G5_DM LINE Jockey -651 4205 3973 7 590 3898 16 158 6 chrUextra 761916 762409 -28242247 - G5_DM LINE Jockey -1041 3815 3248 7 590 2205 20 0 0 chrUextra 762387 762639 -28242017 - G5_DM LINE Jockey -2001 2855 2604 7 590 3309 48 5 2 chrUextra 762618 763017 -28241639 - G5_DM LINE Jockey -2986 1870 1471 7 590 12225 6 0 0 chrUextra 763117 764438 -28240218 - TART LINE telomeric -9935 4542 3222 7 590 4753 34 10 5 chrUextra 764538 765132 -28239524 + PROTOP_A DNA P 509 1105 0 7 590 329 0 0 0 chrUextra 765132 765170 -28239486 + PROTOP_A DNA P 1067 1104 -1 7 590 233 189 37 19 chrUextra 765335 765389 -28239267 + Gypsy8_LTR LTR Gypsy 2 56 -248 7 590 293 188 0 0 chrUextra 765593 765657 -28238999 + Gypsy8_I LTR Gypsy 230 293 -4054 7 590 1659 30 25 0 chrUextra 765657 765859 -28238797 + PROTOP DNA P 296 502 -3978 7 590 4893 13 6 0 chrUextra 765959 766502 -28238154 + DMRT1B LINE R1 4638 5183 0 7 590 638 0 0 0 chrUextra 766504 766577 -28238079 + QUASIMODO_LTR LTR Gypsy 55 127 -531 7 590 1868 10 0 0 chrUextra 767379 767582 -28237074 + PROTOP DNA P 4277 4479 -1 7 590 450 231 18 9 chrUextra 767757 767866 -28236790 + MICROPIA_LTR LTR Gypsy 367 476 0 7 590 1464 168 120 102 chrUextra 767919 768517 -28236139 - Gypsy12A_LTR LTR Gypsy -218 2062 1454 7 590 930 0 0 0 chrUextra 768535 768643 -28236013 - DMCR1A LINE CR1 -168 4302 4195 7 590 424 109 16 0 chrUextra 768634 768698 -28235958 - DMCR1A LINE CR1 -492 3978 3914 7 590 21 0 0 0 chrUextra 769028 769049 -28235607 + AT_rich Low_complexity Low_complexity 1 21 0 7 590 25 65 0 0 chrUextra 769101 769147 -28235509 + AT_rich Low_complexity Low_complexity 1 46 0 7 590 1157 223 174 47 chrUextra 769240 769737 -28234919 - DNAREP1_DM LINE Penelope -25 569 10 7 590 833 164 48 72 chrUextra 769858 770107 -28234549 - Gypsy_LTR LTR Gypsy -86 396 154 7 590 288 300 63 20 chrUextra 770248 770503 -28234153 + Gypsy5_I LTR Gypsy 4759 5024 -1485 7 590 225 300 0 0 chrUextra 770671 770741 -28233915 + ZAM_I LTR Gypsy 7092 7161 -329 7 590 297 317 10 0 chrUextra 771434 771535 -28233121 + NOMAD_I LTR Gypsy 564 665 -5907 7 590 11035 41 1 1 chrUextra 771635 772952 -28231704 - HETA LINE telomeric -4085 1996 681 7 590 1620 0 0 0 chrUextra 773056 773258 -28231398 + (TTCTC)n Simple_repeat Simple_repeat 1 202 0 7 590 4729 0 0 0 chrUextra 773258 773763 -28230893 - TABOR_LTR LTR Gypsy -1 505 1 7 590 550 0 0 0 chrUextra 773761 773829 -28230827 - TABOR_I LTR Gypsy 0 6336 6269 7 590 4841 0 0 0 chrUextra 773829 774347 -28230309 + NOMAD_LTR LTR Gypsy 1 518 0 7 590 8844 46 91 2 chrUextra 774472 775740 -28228916 - IVK_DM LINE I -106 5296 3917 7 590 240 0 0 0 chrUextra 775885 775911 -28228745 + R1_DM LINE R1 5331 5356 0 7 590 10030 52 29 3 chrUextra 775944 777201 -28227455 + R1_DM LINE R1 1 1289 -4067 7 590 930 89 9 21 chrUextra 777301 778550 -28226106 + RSP Satellite Satellite 1 1234 0 7 590 2056 13 4 0 chrUextra 778901 779140 -28225516 - ALUII_DM Unknown Unknown 0 240 1 7 590 21 57 0 0 chrUextra 779140 779175 -28225481 + AT_rich Low_complexity Low_complexity 1 35 0 7 590 28 95 0 0 chrUextra 779330 779414 -28225242 + AT_rich Low_complexity Low_complexity 1 84 0 7 590 37 39 0 0 chrUextra 779515 779566 -28225090 + AT_rich Low_complexity Low_complexity 1 51 0 7 590 28 48 0 0 chrUextra 779921 779963 -28224693 + AT_rich Low_complexity Low_complexity 1 42 0 7 590 2725 0 3 0 chrUextra 780129 780423 -28224233 + BEL_I LTR Pao 5110 5404 0 7 590 3377 0 0 0 chrUextra 780423 780784 -28223872 + BEL_LTR LTR Pao 1 361 0 7 590 6108 0 0 0 chrUextra 780794 781443 -28223213 + BEL_I LTR Pao 1884 2532 -2872 7 590 3999 172 96 109 chrUextra 781575 782842 -28221814 + TART LINE telomeric 8950 10200 -4277 7 590 6949 127 40 54 chrUextra 782955 784265 -28220391 + BATUMI_I LTR Pao 3340 4631 -3332 7 590 27 0 0 0 chrUextra 784371 784398 -28220258 + AT_rich Low_complexity Low_complexity 1 27 0 7 590 25 0 0 0 chrUextra 784492 784517 -28220139 + AT_rich Low_complexity Low_complexity 1 25 0 7 590 625 209 127 102 chrUextra 784740 785023 -28219633 + MICROPIA_LTR LTR Gypsy 86 375 -101 7 590 4125 23 2 2 chrUextra 785197 785673 -28218983 + PROTOP DNA P 1 476 -4004 7 590 807 20 10 0 chrUextra 785776 785875 -28218781 + R1_DM LINE R1 3987 4086 -1270 7 73 6716 33 13 0 chrUextra 785873 786661 -28217995 + R1_DM LINE R1 4559 5356 0 7 591 2944 73 10 5 chrUextra 786694 787081 -28217575 + R1_DM LINE R1 1 389 -4967 7 591 8892 43 11 8 chrUextra 787181 788256 -28216400 - Baggins1 LINE LOA -982 4471 3394 7 591 1763 71 0 0 chrUextra 788264 788488 -28216168 - Baggins1 LINE LOA -2270 3183 2960 7 591 620 320 17 17 chrUextra 788596 788943 -28215713 + HMSBEAGLE_I LTR Gypsy 5039 5385 -1144 7 591 5973 14 0 0 chrUextra 790006 790667 -28213989 + G_DM LINE Jockey 2867 3527 -819 7 591 4950 52 22 0 chrUextra 790665 791301 -28213355 - R1_DM LINE R1 -4374 982 333 7 591 896 139 375 0 chrUextra 791880 792092 -28212564 + DNAREP1_DM LINE Penelope 304 594 0 7 591 26 30 0 0 chrUextra 792356 792389 -28212267 + AT_rich Low_complexity Low_complexity 1 33 0 7 591 5605 6 3 0 chrUextra 792806 793448 -28211208 - DM176_I LTR Gypsy -4145 2275 1632 7 591 5765 3 42 0 chrUextra 793436 794111 -28210545 - DM176_I LTR Gypsy -4926 1494 792 7 591 4304 28 2 23 chrUextra 794289 794804 -28209852 - CIRCE LINE Composite -4471 1885 1382 7 591 1802 38 0 0 chrUextra 794804 795016 -28209640 + STALKER4_LTR LTR Gypsy 1 212 -190 7 591 47 0 0 0 chrUextra 795460 795507 -28209149 + AT_rich Low_complexity Low_complexity 1 47 0 7 591 2545 125 1 23 chrUextra 797021 797767 -28206889 + DMSAT6 Satellite Satellite 1 729 -159 7 591 2331 120 39 34 chrUextra 797788 798325 -28206331 + DMSAT6 Satellite Satellite 1 540 -1 7 591 619 180 8 30 chrUextra 798425 798557 -28206099 - HETRP_DM Satellite Satellite -215 1657 1529 7 591 665 204 13 26 chrUextra 798682 798838 -28205818 - HETRP_DM Satellite Satellite -190 1682 1529 7 591 735 184 11 69 chrUextra 798964 799139 -28205517 - HETRP_DM Satellite Satellite -190 1682 1518 7 591 648 204 13 26 chrUextra 799269 799425 -28205231 - HETRP_DM Satellite Satellite -190 1682 1529 7 591 454 229 16 32 chrUextra 799553 799679 -28204977 - HETRP_DM Satellite Satellite -190 1682 1559 7 591 315 49 0 0 chrUextra 799688 799729 -28204927 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 591 6070 3 0 1 chrUextra 799829 800490 -28204166 - POGO DNA Pogo -1461 660 1 7 591 541 104 31 0 chrUextra 800894 800990 -28203666 + PROTOP DNA P 3521 3619 -861 7 591 520 0 0 15 chrUextra 801067 801132 -28203524 + Copia_LTR LTR Copia 1 64 -212 7 591 3385 121 198 41 chrUextra 801232 801895 -28202761 + STALKER4_I LTR Gypsy 1584 2350 -4180 7 591 1557 92 37 8 chrUextra 801897 802138 -28202518 + STALKER4_I LTR Gypsy 2617 2864 -3666 7 591 2150 54 3 35 chrUextra 802137 802426 -28202230 - Gypsy6A_LTR LTR Gypsy -70 350 71 7 591 481 105 55 55 chrUextra 802444 802535 -28202121 + R1_DM LINE R1 1 91 -5265 7 591 722 195 13 25 chrUextra 802646 802804 -28201852 + HETRP_DM Satellite Satellite 1529 1684 -188 7 591 671 202 12 58 chrUextra 802905 803078 -28201578 + HETRP_DM Satellite Satellite 1518 1682 -190 7 591 658 206 13 25 chrUextra 803197 803356 -28201300 + HETRP_DM Satellite Satellite 1529 1685 -187 7 591 210 37 0 0 chrUextra 803497 803524 -28201132 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 591 522 220 15 29 chrUextra 803524 803660 -28200996 + HETRP_DM Satellite Satellite 1549 1682 -190 7 591 728 188 13 25 chrUextra 803779 803937 -28200719 + HETRP_DM Satellite Satellite 1529 1684 -188 7 591 5764 23 1 11 chrUextra 804038 804707 -28199949 + R1_DM LINE R1 4694 5356 0 7 591 4775 60 3 3 chrUextra 804740 805340 -28199316 + R1_DM LINE R1 1 600 -4756 7 591 6883 45 12 3 chrUextra 805440 806292 -28198364 - R1_DM LINE R1 -3905 1451 593 7 591 1359 85 16 0 chrUextra 806290 806479 -28198177 - R1_DM LINE R1 -5164 192 1 7 591 2094 9 4 0 chrUextra 806512 806742 -28197914 - R1_DM LINE R1 0 5356 5126 7 591 3969 9 2 0 chrUextra 806842 807277 -28197379 + LSU-rRNA_Dme rRNA rRNA 3458 3893 -7 7 591 227 195 0 0 chrUextra 807293 807334 -28197322 + LSU-rRNA_Dme rRNA rRNA 2580 2620 -1280 7 591 6248 24 0 30 chrUextra 807384 808144 -28196512 - G_DM LINE Jockey -15 4331 3595 7 591 2902 33 0 0 chrUextra 808268 808604 -28196052 + DM1731_LTR LTR Copia 1 336 0 7 591 1553 0 6 0 chrUextra 808604 808774 -28195882 + DM1731_I LTR Copia 1 171 -3805 7 591 724 10 0 9 chrUextra 808772 808877 -28195779 - DOC LINE Jockey -1 4724 4621 7 591 6034 12 1 0 chrUextra 808875 809546 -28195110 + DM1731_I LTR Copia 163 834 -3142 7 591 3350 36 58 7 chrUextra 809648 810065 -28194591 - DMCR1A LINE CR1 -2951 1519 1082 7 591 3913 37 17 7 chrUextra 810378 810947 -28193709 + Transib5 DNA Transib 1191 1805 -1196 7 591 27 73 0 0 chrUextra 811308 811363 -28193293 + AT_rich Low_complexity Low_complexity 1 55 0 7 591 23 68 0 0 chrUextra 811401 811445 -28193211 + AT_rich Low_complexity Low_complexity 1 44 0 7 591 26 30 0 0 chrUextra 811491 811524 -28193132 + AT_rich Low_complexity Low_complexity 1 33 0 7 591 3145 55 57 0 chrUextra 811910 812346 -28192310 - PROTOP_A DNA P -49 1056 596 7 591 4580 204 19 0 chrUextra 812447 813287 -28191369 - TIRANT_I LTR Gypsy -5443 2249 1394 7 591 254 300 15 15 chrUextra 813336 813468 -28191188 + (TATATG)n Simple_repeat Simple_repeat 2 133 0 7 591 22 0 0 0 chrUextra 813494 813516 -28191140 + AT_rich Low_complexity Low_complexity 1 22 0 7 591 264 279 30 37 chrUextra 813595 813729 -28190927 - TIRANT_I LTR Gypsy -6337 1355 1223 7 591 708 97 7 22 chrUextra 813846 814116 -28190540 + RSP Satellite Satellite 1 266 0 7 591 7377 34 19 8 chrUextra 814120 814994 -28189662 - G5_DM LINE Jockey 0 4856 3973 7 591 1470 6 0 0 chrUextra 814984 815142 -28189514 - G5_DM LINE Jockey -1041 3815 3658 7 591 2309 19 0 0 chrUextra 815242 815498 -28189158 + R1_DM LINE R1 5101 5356 0 7 591 4900 59 3 3 chrUextra 815531 816144 -28188512 + R1_DM LINE R1 1 613 -4743 7 591 3351 50 0 0 chrUextra 816140 816537 -28188119 + R1_DM LINE R1 1234 1630 -3726 7 591 1995 89 101 30 chrUextra 816637 816974 -28187682 - BATUMI_I LTR Pao -7602 361 1 7 591 2143 36 3 31 chrUextra 816974 817261 -28187395 - BATUMI_I LTR Pao -679 7284 7006 7 591 5386 11 6 14 chrUextra 817266 817932 -28186724 - STALKER4_I LTR Gypsy -109 6421 5761 7 591 944 338 81 21 chrUextra 818044 818721 -28185935 - Invader6_I LTR Gypsy -1753 2346 1629 7 591 276 279 0 0 chrUextra 818746 818814 -28185842 - Invader4_I LTR Gypsy -1111 1302 1235 7 591 24 32 0 0 chrUextra 818820 818851 -28185805 + AT_rich Low_complexity Low_complexity 1 31 0 7 591 3217 74 28 129 chrUextra 819426 820044 -28184612 - CIRCE LINE Composite -821 5535 4981 7 591 2239 77 3 6 chrUextra 820407 820720 -28183936 - CIRCE LINE Composite -1376 4980 4669 7 591 3407 174 55 51 chrUextra 820823 822103 -28182553 - TAHRE LINE telomeric -14 10449 8037 7 591 5641 11 2 0 chrUextra 822211 822836 -28181820 + DMRT1A LINE R1 2385 3010 -2173 7 591 4853 73 15 12 chrUextra 822832 823501 -28181155 - TRANSIB4 DNA Transib -50 2560 1890 7 591 11130 22 26 1 chrUextra 823602 824892 -28179764 - R1_DM LINE R1 -1513 3843 2522 7 591 2780 12 68 0 chrUextra 824992 825115 -28179541 - Stalker3_LTR LTR Gypsy -25 347 225 7 591 207 0 0 0 chrUextra 825115 825138 -28179518 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 591 2780 12 68 0 chrUextra 825138 825339 -28179317 - Stalker3_LTR LTR Gypsy -148 224 2 7 591 1838 18 82 0 chrUextra 825339 825558 -28179098 + R1_DM LINE R1 4830 5066 -290 7 591 979 53 0 0 chrUextra 825555 825669 -28178987 + R1_DM LINE R1 5243 5356 0 7 591 4517 68 3 5 chrUextra 825702 826282 -28178374 + R1_DM LINE R1 1 579 -4777 7 591 833 60 0 0 chrUextra 826382 826482 -28178174 - CIRCE LINE Composite -5284 1072 973 7 591 7848 14 46 35 chrUextra 826624 827584 -28177072 - CIRCE LINE Composite -5386 970 1 7 591 690 46 11 0 chrUextra 827584 827671 -28176985 - CIRCE LINE Composite 0 6356 6269 7 591 5133 14 0 0 chrUextra 827771 828348 -28176308 + PROTOP DNA P 3904 4480 0 7 591 4979 70 90 13 chrUextra 829162 829859 -28174797 + R1_DM LINE R1 1 751 -4605 7 591 4948 58 0 2 chrUextra 829844 830446 -28174210 + R1_DM LINE R1 1135 1735 -3621 7 591 11304 20 1 2 chrUextra 830546 831832 -28172824 - R1_DM LINE R1 -817 4539 3256 7 591 4500 135 28 18 chrUextra 831932 833208 -28171448 - Gypsy3_I LTR Gypsy -776 5401 4042 7 591 5407 93 32 49 chrUextra 833317 834306 -28170350 - HETA LINE telomeric -5193 888 1 7 591 1833 107 3 10 chrUextra 834302 834596 -28170060 - TAHRE LINE telomeric -13 10450 10159 7 591 1500 289 71 28 chrUextra 834705 835344 -28169312 + Gypsy4_I LTR Gypsy 2797 3463 -2825 7 591 353 286 57 0 chrUextra 835344 835449 -28169207 + ACCORD_LTR LTR Gypsy 1 111 -447 7 591 234 239 0 0 chrUextra 835742 835788 -28168868 + Gypsy4_I LTR Gypsy 3452 3497 -2791 7 591 436 237 51 51 chrUextra 835799 835955 -28168701 + Gypsy4_I LTR Gypsy 3458 3705 -2155 7 591 366 256 98 102 chrUextra 836446 836711 -28167945 - Invader1_LTR LTR Gypsy -55 368 105 7 591 2441 82 32 20 chrUextra 836811 837227 -28167429 + Gypsy6A_LTR LTR Gypsy 1 420 0 7 591 591 45 0 236 chrUextra 837227 837371 -28167285 + Gypsy6_I LTR Gypsy 1 110 -6902 7 591 9040 100 49 6 chrUextra 837471 838754 -28165902 + Gypsy12_I LTR Gypsy 1056 2394 -3152 7 591 9767 60 51 7 chrUextra 838854 840137 -28164519 - HMSBEAGLE_I LTR Gypsy -3507 3022 1684 7 591 10968 20 46 0 chrUextra 840241 841520 -28163136 + DMRT1A LINE R1 1073 2410 -2773 7 591 11145 21 2 7 chrUextra 841620 842903 -28161753 - R1_DM LINE R1 -1179 4177 2902 7 591 4511 58 2 2 chrUextra 843003 843553 -28161103 + R1_DM LINE R1 1041 1590 -3766 7 591 6488 18 10 0 chrUextra 843554 844286 -28160370 + R1_DM LINE R1 1706 2444 -2912 7 591 1470 6 0 0 chrUextra 844386 844549 -28160107 - QUASIMODO_LTR LTR Gypsy -372 286 124 7 591 724 321 22 29 chrUextra 844627 845038 -28159618 + Invader5_I LTR Gypsy 1225 1632 -1702 7 591 1330 320 26 21 chrUextra 845045 845668 -28158988 + MICROPIA_I LTR Gypsy 2536 3161 -1315 7 591 5006 33 0 2 chrUextra 845768 846372 -28158284 - TRANSIB2 DNA Transib -2241 603 1 7 591 955 9 0 0 chrUextra 846372 846484 -28158172 - Invader2_I LTR Gypsy -4480 112 1 7 591 2413 15 0 0 chrUextra 846484 846750 -28157906 - Invader2_LTR LTR Gypsy 0 266 1 7 591 2629 33 0 0 chrUextra 846750 847049 -28157607 + DMCR1A LINE CR1 3459 3757 -713 7 591 9969 40 13 32 chrUextra 847149 848428 -28156228 + Gypsy12_LTR LTR Gypsy 207 1461 -875 7 591 250 263 13 13 chrUextra 849151 849228 -28155428 + (CATA)n Simple_repeat Simple_repeat 1 77 0 7 591 7955 25 13 0 chrUextra 849935 850847 -28153809 + R1_DM LINE R1 4143 5066 -290 7 591 954 27 27 0 chrUextra 850844 850955 -28153701 + R1_DM LINE R1 5243 5356 0 7 591 1275 66 6 0 chrUextra 850988 851155 -28153501 + R1_DM LINE R1 1 168 -5188 7 591 3709 7 0 0 chrUextra 851285 851695 -28152961 - Gypsy5_LTR LTR Gypsy -20 410 1 7 591 7860 2 5 0 chrUextra 851695 852563 -28152093 - Gypsy5_I LTR Gypsy 0 6509 5638 7 591 2466 109 14 29 chrUextra 852663 853919 -28150737 + DMSAT6 Satellite Satellite 1 1237 -67 7 591 10816 25 30 1 chrUextra 854040 855317 -28149339 - FW_DM LINE Jockey -2762 1930 616 7 591 1512 116 96 4 chrUextra 855703 855963 -28148693 + DNAREP1_DM LINE Penelope 1 284 -310 7 591 2192 154 77 65 chrUextra 856185 856693 -28147963 + DNAREP1_DM LINE Penelope 1 514 -80 7 591 3886 93 77 39 chrUextra 856793 857494 -28147162 + TART LINE telomeric 2635 3362 -11115 7 591 1468 138 63 24 chrUextra 857489 857741 -28146915 + TART LINE telomeric 3683 3944 -10533 7 591 368 283 127 62 chrUextra 857744 858055 -28146601 + TART LINE telomeric 8899 9206 -1448 7 591 3770 202 50 28 chrUextra 858170 859445 -28145211 + SAR_DM Satellite Satellite 1 1304 -168 7 591 1553 77 0 0 chrUextra 859545 859741 -28144915 + CIRCE LINE Composite 4182 4377 -1979 7 591 419 100 14 28 chrUextra 859741 859813 -28144843 - DMTOM1_LTR LTR Gypsy 0 410 340 7 591 617 188 46 55 chrUextra 859804 860013 -28144643 - DMTOM1_LTR LTR Gypsy -19 488 284 7 591 278 140 20 20 chrUextra 860121 860172 -28144484 - DMTOM1_LTR LTR Gypsy -238 269 219 7 591 3425 89 69 29 chrUextra 860267 860821 -28143835 + CIRCE LINE Composite 4371 4946 -1410 7 591 8688 46 28 49 chrUextra 860921 862196 -28142460 + BATUMI_I LTR Pao 428 1675 -6288 7 591 4201 204 24 34 chrUextra 862297 863571 -28141085 + SAR_DM Satellite Satellite 1 1260 -203 7 591 2757 198 33 82 chrUextra 863671 864541 -28140115 + HETA LINE telomeric 3282 4109 -1972 7 591 2394 92 10 30 chrUextra 864541 864945 -28139711 + TART LINE telomeric 9331 9726 -4751 7 591 3733 21 0 2 chrUextra 865045 865473 -28139183 - PROTOP_A DNA P -678 427 1 7 591 7053 27 50 8 chrUextra 865473 866319 -28138337 - DMCR1A LINE CR1 -2825 1645 765 7 591 4271 3 132 0 chrUextra 866419 867056 -28137600 - TART LINE telomeric -346 14131 13411 7 591 2792 176 11 10 chrUextra 867054 867575 -28137081 - TAHRE LINE telomeric -11 10452 9931 7 591 341 186 45 34 chrUextra 867597 867686 -28136970 - TAHRE LINE telomeric -631 9832 9743 7 591 3713 203 45 25 chrUextra 867793 869065 -28135591 - SAR_DM Satellite Satellite -224 1297 1 7 591 2740 104 16 20 chrUextra 869200 870437 -28134219 - DMSAT6 Satellite Satellite 0 1231 1 7 591 1493 0 0 0 chrUextra 870537 870703 -28133953 - Copia_I LTR Copia -4427 166 1 7 591 2442 0 0 0 chrUextra 870703 870979 -28133677 - Copia_LTR LTR Copia 0 276 1 7 591 281 106 0 21 chrUextra 871171 871219 -28133437 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 591 263 128 0 21 chrUextra 871430 871478 -28133178 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 591 4701 36 54 33 chrUextra 871909 872518 -28132138 - Gypsy12_LTR LTR Gypsy -1714 622 1 7 591 5802 12 6 5 chrUextra 872518 873169 -28131487 - Gypsy12_I LTR Gypsy 0 5546 4895 7 591 10345 27 34 7 chrUextra 873280 874550 -28130106 + ROO_I LTR Pao 2225 3528 -4728 7 591 3866 42 2 0 chrUextra 874650 875121 -28129535 + PROTOP_A DNA P 634 1105 0 7 591 2268 86 35 51 chrUextra 875211 875639 -28129017 + ACCORD2_I LTR Gypsy 1608 2028 -5184 7 591 1882 85 58 10 chrUextra 875609 875918 -28128738 + ACCORD2_I LTR Gypsy 1836 2159 -5053 7 591 6240 5 3 4 chrUextra 876020 877290 -28127366 + G2_DM LINE Jockey 1675 3002 -100 7 591 5402 19 1 6 chrUextra 877390 878659 -28125997 - Invader2_I LTR Gypsy -1792 2800 1474 7 591 4590 8 0 0 chrUextra 878759 879257 -28125399 + Copia2_I LTR Copia 3530 4027 -135 7 591 208 200 31 0 chrUextra 879470 879535 -28125121 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 591 22 35 0 0 chrUextra 879728 879757 -28124899 + AT_rich Low_complexity Low_complexity 1 29 0 7 591 2803 19 0 0 chrUextra 880128 880443 -28124213 + PROTOP_A DNA P 791 1105 0 7 591 664 131 145 16 chrUextra 880493 880617 -28124039 - DNAREP1_DM LINE Penelope -128 466 327 7 591 674 204 14 7 chrUextra 880650 880788 -28123868 - Invader3_I LTR Gypsy -4068 820 682 7 591 23 0 0 0 chrUextra 880798 880821 -28123835 + AT_rich Low_complexity Low_complexity 1 23 0 7 591 5591 0 0 2 chrUextra 881497 882098 -28122558 - DOC LINE Jockey -4122 603 4 7 591 1047 101 41 10 chrUextra 882093 882264 -28122392 - DMRT1B LINE R1 -4850 333 1 7 591 458 47 0 72 chrUextra 882457 882526 -28122130 - QUASIMODO_LTR LTR Gypsy -593 65 2 7 591 728 64 9 0 chrUextra 882872 882981 -28121675 + TRANSIB2 DNA Transib 2111 2220 -624 7 591 642 146 8 23 chrUextra 883331 883469 -28121187 + TRANSIB2 DNA Transib 2186 2323 -691 7 591 1666 70 48 0 chrUextra 883500 883730 -28120926 + TRANSIB2 DNA Transib 2604 2844 0 7 591 2949 109 0 0 chrUextra 883731 884133 -28120523 - DMRT1B LINE R1 -1287 3896 3495 7 591 5192 23 16 3 chrUextra 884233 884852 -28119804 - G_DM LINE Jockey -3718 628 2 7 591 2457 59 0 10 chrUextra 884831 885141 -28119515 - FW_DM LINE Jockey -4385 307 1 7 591 3074 28 0 0 chrUextra 885149 885501 -28119155 + R1_DM LINE R1 1377 1728 -3628 7 591 11021 22 19 1 chrUextra 885601 886868 -28117788 - R1_DM LINE R1 -1170 4186 2897 7 591 3321 14 0 0 chrUextra 886968 887333 -28117323 - SSU-rRNA_Dme rRNA rRNA -1201 794 430 7 591 627 104 29 172 chrUextra 887393 887567 -28117089 - MICROPIA_LTR LTR Gypsy -172 304 156 7 591 228 163 0 20 chrUextra 887588 887638 -28117018 - MICROPIA_I LTR Gypsy 0 4476 4428 7 591 21 0 0 0 chrUextra 888200 888221 -28116435 + AT_rich Low_complexity Low_complexity 1 21 0 7 591 2202 30 13 3 chrUextra 888335 888634 -28116022 + MDG1_I LTR Gypsy 5995 6296 -300 7 591 775 89 7 46 chrUextra 888603 888756 -28115900 + MDG1_I LTR Gypsy 6450 6596 0 7 591 339 105 0 0 chrUextra 888772 888829 -28115827 + (TAA)n Simple_repeat Simple_repeat 3 59 0 7 591 1965 89 78 3 chrUextra 888831 889113 -28115543 + MDG1_LTR LTR Gypsy 94 396 -46 7 591 804 275 25 59 chrUextra 889701 890057 -28114599 + FROGGER_I LTR Copia 1694 2037 -40 7 591 28 0 0 0 chrUextra 890600 890628 -28114028 + AT_rich Low_complexity Low_complexity 1 28 0 7 591 2533 124 14 32 chrUextra 891068 892331 -28112325 - DMSAT6 Satellite Satellite -3 1240 1 7 591 5480 22 25 3 chrUextra 892432 893084 -28111572 + FW_DM LINE Jockey 4027 4692 0 7 591 273 29 0 0 chrUextra 893088 893122 -28111534 - R1_DM LINE R1 -3966 1390 1357 7 591 4832 31 2 2 chrUextra 893122 893696 -28110960 - R1_DM LINE R1 -4150 1206 633 7 591 2269 205 19 42 chrUextra 895228 895769 -28108887 - Gypsy12_LTR LTR Gypsy -1808 528 1 7 591 4567 91 73 17 chrUextra 895768 896424 -28108232 - Gypsy12_I LTR Gypsy 0 5546 4854 7 591 8104 31 2 48 chrUextra 896524 897597 -28107059 - NINJA_I LTR Pao -4987 1024 1 7 591 1560 53 0 5 chrUextra 897598 897787 -28106869 - NINJA_LTR LTR Pao -1 316 129 7 591 230 154 0 0 chrUextra 897902 897941 -28106715 - Stalker2_I LTR Gypsy -7073 329 291 7 591 28 48 0 0 chrUextra 897948 897990 -28106666 + AT_rich Low_complexity Low_complexity 1 42 0 7 591 3406 38 0 2 chrUextra 898042 898442 -28106214 - STALKER4_LTR LTR Gypsy -3 399 1 7 591 6008 35 7 4 chrUextra 898442 899149 -28105507 - R1_DM LINE R1 -2213 3143 2435 7 591 2279 0 0 0 chrUextra 899254 899501 -28105155 + Gypsy2_I LTR Gypsy 5889 6135 0 7 591 3325 0 0 0 chrUextra 899501 899854 -28104802 + Gypsy2_LTR LTR Gypsy 1 353 0 7 591 547 308 21 45 chrUextra 899884 900173 -28104483 - HMSBEAGLE_I LTR Gypsy -3604 2925 2644 7 591 281 232 0 0 chrUextra 900442 900511 -28104145 - HMSBEAGLE_I LTR Gypsy -4097 2432 2364 7 591 1265 77 0 0 chrUextra 900611 900805 -28103851 + S_DM DNA Tc1 1543 1736 0 7 591 1255 42 6 0 chrUextra 900805 900964 -28103692 + CIRCE LINE Composite 4493 4652 -1704 7 591 421 66 0 0 chrUextra 900965 901026 -28103630 + CIRCE LINE Composite 4561 4621 -1735 7 591 1187 56 0 0 chrUextra 901022 901165 -28103491 + CIRCE LINE Composite 4838 4980 -1376 7 591 1338 55 0 0 chrUextra 901355 901518 -28103138 - R1_DM LINE R1 -4037 1319 1157 7 591 2871 49 0 6 chrUextra 901520 901872 -28102784 - R1_DM LINE R1 -4745 611 262 7 591 4681 18 0 39 chrUextra 901972 902544 -28102112 - G_DM LINE Jockey -392 3954 3405 7 591 1247 42 0 0 chrUextra 902540 902683 -28101973 - G_DM LINE Jockey -1178 3168 3026 7 591 4766 25 2 0 chrUextra 902675 903233 -28101423 - G_DM LINE Jockey -1713 2633 2075 7 591 2154 139 232 0 chrUextra 903334 904011 -28100645 - DMRT1B LINE R1 -380 4803 3968 7 591 4522 43 0 10 chrUextra 904014 904594 -28100062 + TRANSIB2 DNA Transib 10 583 -2261 7 591 10816 28 24 1 chrUextra 904694 905954 -28098702 + R1_DM LINE R1 1439 2727 -2629 7 591 6108 98 0 0 chrUextra 906054 906854 -28097802 - Gypsy12_I LTR Gypsy -2058 3488 2689 7 591 324 125 0 0 chrUextra 906863 906911 -28097745 - Gypsy12_I LTR Gypsy -3094 2452 2405 7 591 2811 117 2 0 chrUextra 906917 907311 -28097345 - Gypsy12_I LTR Gypsy -3468 2078 1684 7 591 635 0 0 0 chrUextra 907411 907484 -28097172 - TABOR_I LTR Gypsy -6263 73 1 7 591 4737 0 0 0 chrUextra 907484 907990 -28096666 - TABOR_LTR LTR Gypsy 0 506 1 7 591 6154 9 0 0 chrUextra 907990 908668 -28095988 - DMRT1B LINE R1 -355 4828 4151 7 591 3945 183 40 30 chrUextra 908768 910024 -28094632 + SAR_DM Satellite Satellite 1 1269 -203 7 591 5485 228 15 10 chrUextra 910124 911380 -28093276 + G_DM LINE Jockey 2449 3711 -635 7 591 5017 203 15 48 chrUextra 911492 912735 -28091921 + TAHRE LINE telomeric 6 1207 -9256 7 591 5357 3 2 2 chrUextra 912836 913417 -28091239 - R2_DM LINE R2 -3025 582 2 7 591 6371 1 0 0 chrUextra 913414 914091 -28090565 + R2_DM LINE R2 1742 2418 -1189 7 591 1472 15 25 20 chrUextra 914191 914390 -28090266 + NTS_DM Other Other 41 240 0 7 591 1975 4 17 13 chrUextra 914390 914629 -28090027 + NTS_DM Other Other 1 240 0 7 591 815 0 0 0 chrUextra 914629 914716 -28089940 + NTS_DM Other Other 1 87 -153 7 591 6531 7 0 0 chrUextra 914716 915445 -28089211 + G6_DM LINE Jockey 1 729 -1313 7 591 2831 58 117 0 chrUextra 915545 915939 -28088717 + PROTOP DNA P 60 499 -3981 7 591 2671 52 265 10 chrUextra 915963 916538 -28088118 + PROTOP DNA P 2910 3631 -849 7 591 1236 134 29 8 chrUextra 916536 916776 -28087880 + PROTOP_A DNA P 740 984 -121 7 591 4605 4 0 0 chrUextra 916920 917427 -28087229 + DM176_LTR LTR Gypsy 1 507 0 7 73 919 0 194 0 chrUextra 917427 917540 -28087116 + ACCORD_LTR LTR Gypsy 422 558 0 7 592 5439 7 3 3 chrUextra 917540 918152 -28086504 + ACCORD_I LTR Gypsy 1 612 -5676 7 592 238 170 0 54 chrUextra 918331 918387 -28086269 - MINOS DNA Tc1 -452 1323 1271 7 592 510 33 0 0 chrUextra 919445 919505 -28085151 - PROTOP_B DNA P 0 1153 1094 7 592 2435 303 45 30 chrUextra 919639 920757 -28083899 - Invader6_I LTR Gypsy -1540 2559 1426 7 592 832 121 0 8 chrUextra 920732 920857 -28083799 + Gypsy7_I LTR Gypsy 3177 3300 -1684 7 592 3456 3 5 0 chrUextra 920958 921343 -28083313 + G2_DM LINE Jockey 2715 3101 -1 7 592 4371 65 16 23 chrUextra 921592 922210 -28082446 - TRANSIB4 DNA Transib 0 2610 1997 7 592 5408 48 0 0 chrUextra 922310 922951 -28081705 + HELENA_RT LINE Jockey 677 1317 0 7 592 2010 34 216 17 chrUextra 922989 923290 -28081366 - DMCR1A LINE CR1 -4108 362 2 7 592 270 232 0 0 chrUextra 923677 923733 -28080923 - DM176_I LTR Gypsy -3724 2696 2641 7 592 2410 60 3 75 chrUextra 923708 924053 -28080603 - CIRCE LINE Composite -5064 1292 973 7 592 6049 31 0 0 chrUextra 924209 924914 -28079742 - G2_DM LINE Jockey -10 3092 2388 7 592 26 82 0 0 chrUextra 925037 925098 -28079558 + AT_rich Low_complexity Low_complexity 1 61 0 7 592 291 268 51 10 chrUextra 925250 925348 -28079308 - DMCR1A LINE CR1 -616 3854 3753 7 592 375 280 17 0 chrUextra 925362 925480 -28079176 - DMCR1A LINE CR1 -776 3694 3575 7 592 1098 152 22 5 chrUextra 926392 926577 -28078079 + Invader1_LTR LTR Gypsy 236 423 0 7 592 420 329 40 47 chrUextra 926716 927038 -28077618 + MICROPIA_I LTR Gypsy 772 1091 -3385 7 592 426 292 229 29 chrUextra 927060 927502 -28077154 + MICROPIA_I LTR Gypsy 1150 1679 -2797 7 592 860 71 9 0 chrUextra 927505 927618 -28077038 - DMCR1A LINE CR1 0 4470 4357 7 592 2413 4 0 0 chrUextra 927718 927978 -28076678 - Invader4_LTR LTR Gypsy -86 260 1 7 592 6588 8 29 0 chrUextra 927978 928969 -28075687 - Invader4_I LTR Gypsy 0 2413 1268 7 592 2936 84 75 30 chrUextra 929075 929567 -28075089 - BATUMI_I LTR Pao -7449 514 1 7 592 2360 28 0 27 chrUextra 929567 929863 -28074793 - BATUMI_I LTR Pao -679 7284 6997 7 592 3786 28 22 4 chrUextra 929858 930320 -28074336 - G_DM LINE Jockey -3696 650 181 7 592 10615 3 24 0 chrUextra 930420 931612 -28073044 + DM176_I LTR Gypsy 2460 3679 -2741 7 592 553 0 0 0 chrUextra 931610 931671 -28072985 + DM176_I LTR Gypsy 4297 4357 -2063 7 592 7472 22 83 0 chrUextra 931771 933021 -28071635 - R1_DM LINE R1 -1586 3770 2417 7 592 4192 54 0 4 chrUextra 933138 933644 -28071012 - G5_DM LINE Jockey -4349 507 4 7 592 941 67 0 17 chrUextra 933671 933862 -28070794 + RSP Satellite Satellite 1 187 -2 7 592 823 125 18 16 chrUextra 933888 934371 -28070285 + RSP Satellite Satellite 1 484 0 7 592 4731 8 21 0 chrUextra 934523 935046 -28069610 + Copia2_I LTR Copia 3526 4059 -103 7 592 6119 9 0 6 chrUextra 935047 935720 -28068936 + MICROPIA_I LTR Gypsy 2941 3609 -867 7 592 1559 269 62 26 chrUextra 937234 937765 -28066891 - TOM_I LTR Gypsy -5147 965 416 7 592 24 0 0 0 chrUextra 938319 938343 -28066313 + AT_rich Low_complexity Low_complexity 1 24 0 7 592 1691 30 15 16 chrUextra 938518 938783 -28065873 + LSU-rRNA_Dme rRNA rRNA 3691 3900 0 7 592 266 196 0 19 chrUextra 938884 938936 -28065720 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 266 196 0 19 chrUextra 938976 939028 -28065628 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 266 196 0 19 chrUextra 939068 939120 -28065536 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 277 176 0 19 chrUextra 939151 939203 -28065453 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 2957 6 0 0 chrUextra 939212 939533 -28065123 + MAX_LTR LTR Pao 1 321 0 7 592 2178 4 0 0 chrUextra 939533 939767 -28064889 + MAX_I LTR Pao 1 234 -7680 7 592 4459 279 7 7 chrUextra 939867 941112 -28063544 + TIRANT_I LTR Gypsy 3640 4884 -2808 7 592 4491 95 2 5 chrUextra 941214 941820 -28062836 - R1_DM LINE R1 -3645 1711 1108 7 592 3079 107 72 104 chrUextra 941834 942459 -28062197 - R1_DM LINE R1 -4681 675 71 7 592 5630 28 53 3 chrUextra 942561 943243 -28061413 - R1_DM LINE R1 -255 5101 4386 7 592 5092 26 0 0 chrUextra 943233 943808 -28060848 - R1_DM LINE R1 -736 4620 4046 7 592 5675 2 3 0 chrUextra 943908 944521 -28060135 + LSU-rRNA_Dme rRNA rRNA 2037 2651 -1249 7 592 402 0 0 0 chrUextra 944519 944563 -28060093 + R1_DM LINE R1 4708 4751 -605 7 592 5522 3 0 0 chrUextra 944560 945155 -28059501 + R1_DM LINE R1 4232 4826 -530 7 592 430 74 0 0 chrUextra 945255 945309 -28059347 + Gypsy6A_LTR LTR Gypsy 249 302 -118 7 592 34 24 0 0 chrUextra 945536 945577 -28059079 + AT_rich Low_complexity Low_complexity 1 41 0 7 592 1907 324 15 6 chrUextra 945851 946501 -28058155 + Gypsy6_I LTR Gypsy 945 1600 -5412 7 592 2154 99 6 0 chrUextra 946601 946913 -28057743 + IDEFIX_I LTR Gypsy 3604 3917 -1711 7 592 5570 55 17 9 chrUextra 946907 947658 -28056998 + IDEFIX_I LTR Gypsy 4192 4948 -680 7 592 1455 61 0 5 chrUextra 947649 947847 -28056809 + IDEFIX_I LTR Gypsy 780 976 -4652 7 592 2533 122 13 25 chrUextra 947947 949192 -28055464 + DMSAT6 Satellite Satellite 1 1229 -97 7 592 11137 23 0 2 chrUextra 949292 950537 -28054119 - G5_DM LINE Jockey -674 4182 2941 7 592 7404 57 8 5 chrUextra 950637 951882 -28052774 - HETA LINE telomeric -2166 3915 2897 7 592 8164 83 32 11 chrUextra 953326 954465 -28050191 - BS LINE Jockey -3956 1170 9 7 592 4095 163 146 36 chrUextra 954677 955776 -28048880 + IDEFIX_I LTR Gypsy 282 1501 -4127 7 592 593 144 135 0 chrUextra 955810 955914 -28048742 + IDEFIX_I LTR Gypsy 2442 2559 -3069 7 592 11343 5 2 9 chrUextra 956015 957258 -28047398 - TART LINE telomeric -310 14167 12934 7 592 1136 66 12 35 chrUextra 957363 957536 -28047120 - DMCR1A LINE CR1 -47 4423 4255 7 592 1511 66 0 10 chrUextra 957531 957730 -28046926 - DMCR1A LINE CR1 -2868 1602 1406 7 592 1619 64 18 0 chrUextra 957723 957943 -28046713 - FB4_DM DNA Tc1 -3865 224 1 7 592 2211 166 95 5 chrUextra 957952 958375 -28046281 + FW_DM LINE Jockey 1056 1516 -3176 7 592 910 117 64 12 chrUextra 958424 958597 -28046059 + DM297_LTR LTR Gypsy 1 182 -232 7 592 3608 5 0 0 chrUextra 958701 959089 -28045567 + DMRT1B LINE R1 4796 5183 0 7 592 5441 19 111 7 chrUextra 959088 959944 -28044712 - R1_DM LINE R1 -760 4596 3652 7 592 653 23 11 23 chrUextra 960044 960132 -28044524 - RSP Satellite Satellite -31 87 1 7 592 9461 41 35 2 chrUextra 960159 961287 -28043369 + G5_DM LINE Jockey 4 1169 -3687 7 592 2733 100 19 34 chrUextra 961387 962630 -28042026 + DMSAT6 Satellite Satellite 1 1223 -97 7 592 3928 110 8 12 chrUextra 962730 963319 -28041337 + HMSBEAGLE_I LTR Gypsy 2814 3400 -3129 7 592 4266 73 134 40 chrUextra 963302 963973 -28040683 + DMCR1A LINE CR1 1600 2333 -2137 7 592 5355 20 62 2 chrUextra 964075 964716 -28039940 + FW_DM LINE Jockey 600 1279 -3413 7 592 5068 38 17 0 chrUextra 964714 965316 -28039340 + FW_DM LINE Jockey 366 977 -3715 7 592 756 295 55 40 chrUextra 965423 965748 -28038908 + DM297_I LTR Gypsy 2372 2800 -3367 7 592 1470 29 63 0 chrUextra 965748 965953 -28038703 + TLD2 Unknown Unknown 1 218 0 7 592 756 295 55 40 chrUextra 965953 966081 -28038575 + DM297_I LTR Gypsy 2801 2972 -3195 7 592 245 175 73 73 chrUextra 966104 966172 -28038484 + Gypsy4_I LTR Gypsy 4324 4391 -1897 7 592 2712 106 20 27 chrUextra 966758 967983 -28036673 - DMSAT6 Satellite Satellite -128 1217 1 7 592 4587 48 24 15 chrUextra 968099 969143 -28035513 + PROTOP DNA P 192 1105 0 7 592 358 335 34 34 chrUextra 969143 969339 -28035317 + Gypsy6_I LTR Gypsy 1434 1629 -5383 7 592 1040 61 8 0 chrUextra 969440 969571 -28035085 - G5_DM LINE Jockey -752 4104 3973 7 592 10023 19 9 0 chrUextra 969561 970681 -28033975 - G5_DM LINE Jockey -1041 3815 2686 7 592 10709 33 12 1 chrUextra 972122 973361 -28031295 - R1_DM LINE R1 -3003 2353 1101 7 592 6253 9 17 1 chrUextra 973461 974159 -28030497 + LSU-rRNA_Dme rRNA rRNA 1946 2654 -1246 7 592 5017 2 0 0 chrUextra 974161 974700 -28029956 + R1_DM LINE R1 1672 2210 -3146 7 592 1483 6 0 0 chrUextra 974800 974960 -28029696 + Gypsy4_I LTR Gypsy 2134 2293 -3995 7 592 3015 9 63 0 chrUextra 974960 975161 -28029495 + Stalker3_LTR LTR Gypsy 1 201 -171 7 592 207 0 0 0 chrUextra 975161 975184 -28029472 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 592 3015 9 63 0 chrUextra 975184 975332 -28029324 + Stalker3_LTR LTR Gypsy 202 370 -2 7 592 3415 18 28 0 chrUextra 975332 975721 -28028935 + Gypsy4_I LTR Gypsy 2290 2689 -3599 7 592 2928 21 0 3 chrUextra 975706 976039 -28028617 + Gypsy4_I LTR Gypsy 3200 3531 -2757 7 592 3190 133 14 43 chrUextra 976164 976720 -28027936 + Gypsy12_LTR LTR Gypsy 1774 2313 -23 7 592 3670 43 48 18 chrUextra 976779 977277 -28027379 + PROTOP_A DNA P 1 513 -592 7 592 329 288 30 22 chrUextra 977489 977624 -28027032 - Gypsy11_LTR LTR Gypsy -207 245 110 7 592 3253 11 0 0 chrUextra 977628 977981 -28026675 + Gypsy2_LTR LTR Gypsy 1 353 0 7 592 6167 25 27 7 chrUextra 977981 978717 -28025939 + Gypsy2_I LTR Gypsy 1 751 -5384 7 592 2812 229 91 72 chrUextra 978821 980055 -28024601 - TART LINE telomeric -3895 10582 9326 7 592 274 342 84 39 chrUextra 980464 980796 -28023860 + BLASTOPIA_I LTR Gypsy 4134 4480 -1 7 592 10790 32 1 1 chrUextra 981493 982731 -28021925 + R1_DM LINE R1 1094 2331 -3025 7 592 11015 11 1 13 chrUextra 982831 984069 -28020587 + DM1731_I LTR Copia 728 1950 -2026 7 592 8390 54 11 8 chrUextra 984169 985212 -28019444 - R1_DM LINE R1 -4266 1090 45 7 592 1422 19 0 0 chrUextra 985251 985406 -28019250 - R1_DM LINE R1 0 5356 5202 7 592 10848 14 24 0 chrUextra 985506 986742 -28017914 - FW_DM LINE Jockey -807 3885 2620 7 592 4701 21 70 11 chrUextra 986842 987414 -28017242 - FW_DM LINE Jockey -1954 2738 2133 7 592 2851 63 6 6 chrUextra 987403 987767 -28016889 - R1_DM LINE R1 -4970 386 23 7 592 2525 31 0 7 chrUextra 987788 988078 -28016578 - R1_DM LINE R1 0 5356 5069 7 592 1386 30 0 12 chrUextra 988182 988350 -28016306 - CIRCE LINE Composite -2676 3680 3515 7 592 1560 278 46 6 chrUextra 988347 988821 -28015835 + Gypsy4_I LTR Gypsy 2032 2524 -3764 7 592 22 0 0 0 chrUextra 990606 990628 -28014028 + AT_rich Low_complexity Low_complexity 1 22 0 7 592 2620 115 30 19 chrUextra 990848 992083 -28012573 - DMSAT6 Satellite Satellite -61 1247 1 7 592 11103 2 8 0 chrUextra 992183 993418 -28011238 + DM176_I LTR Gypsy 3494 4738 -1682 7 592 320 127 56 0 chrUextra 993561 993632 -28011024 + ROO_I LTR Pao 820 894 -7362 7 592 9564 31 1 0 chrUextra 993621 994753 -28009903 + ROO_I LTR Pao 1303 2435 -5821 7 592 5305 24 48 0 chrUextra 994853 996087 -28008569 - R1_DM LINE R1 -2069 3287 1964 7 592 26 30 0 0 chrUextra 996190 996223 -28008433 + AT_rich Low_complexity Low_complexity 1 33 0 7 592 748 46 0 0 chrUextra 996247 996334 -28008322 - PROTOP_B DNA P -650 503 417 7 592 3515 48 196 0 chrUextra 996339 996835 -28007821 - DOC3_DM LINE Jockey 0 4740 4148 7 592 5156 29 5 0 chrUextra 996827 997421 -28007235 - DOC3_DM LINE Jockey -738 4002 3406 7 592 2197 174 202 36 chrUextra 997521 998322 -28006334 + TART LINE telomeric 9279 10486 -3991 7 592 34 24 0 0 chrUextra 998331 998372 -28006284 + AT_rich Low_complexity Low_complexity 1 41 0 7 592 5015 20 0 0 chrUextra 998855 999405 -28005251 - G_DM LINE Jockey -869 3477 2928 7 592 5251 13 0 2 chrUextra 999404 1000000 -28004656 - G_DM LINE Jockey -1867 2479 1885 7 592 778 0 11 0 chrUextra 1000000 1000088 -28004568 - G_DM LINE Jockey -2462 1884 1796 7 592 4117 189 26 29 chrUextra 1000188 1001421 -28003235 - SAR_DM Satellite Satellite -1034 1230 1 7 592 2393 265 81 28 chrUextra 1001522 1002751 -28001905 - ROVER-I_DM LTR Gypsy -4939 1645 351 7 592 3101 0 0 0 chrUextra 1002853 1003184 -28001472 + Invader4_LTR LTR Gypsy 16 346 0 7 592 8249 6 9 0 chrUextra 1003184 1004084 -28000572 + Invader4_I LTR Gypsy 1 908 -1505 7 592 2608 40 0 0 chrUextra 1004184 1004487 -28000169 - PROTOP DNA P -4177 303 1 7 592 299 295 0 0 chrUextra 1004700 1004795 -27999861 + TOM_I LTR Gypsy 1685 1779 -4333 7 592 1080 36 0 0 chrUextra 1004811 1004951 -27999705 - G4_DM LINE Jockey 0 3856 3717 7 592 1196 29 0 0 chrUextra 1004949 1005089 -27999567 - G4_DM LINE Jockey -267 3589 3450 7 592 587 282 3 27 chrUextra 1005109 1005408 -27999248 + DM297_I LTR Gypsy 1891 2182 -3985 7 592 3902 32 92 5 chrUextra 1005515 1006169 -27998487 + R1_DM LINE R1 4646 5356 0 7 592 4333 53 32 11 chrUextra 1006176 1006744 -27997912 + R1_DM LINE R1 269 848 -4508 7 592 1679 145 173 14 chrUextra 1007065 1007530 -27997126 - DMRT1B LINE R1 -340 4843 3968 7 592 4206 49 0 9 chrUextra 1007533 1008073 -27996583 + TRANSIB2 DNA Transib 10 544 -2300 7 592 406 175 0 64 chrUextra 1008173 1008283 -27996373 + XDMR_DM Unknown Unknown 258 360 0 7 592 3950 186 60 30 chrUextra 1008192 1009400 -27995256 - SAR_DM Satellite Satellite -354 1243 1 7 592 4989 2 2 2 chrUextra 1009501 1010053 -27994603 - DOC6_DM LINE Jockey -3670 552 1 7 592 4006 174 0 1 chrUextra 1010055 1010712 -27993944 - TIRANT_I LTR Gypsy -5432 2260 1605 7 592 1321 95 141 15 chrUextra 1011248 1011496 -27993160 + ACCORD2_I LTR Gypsy 2895 3120 -4092 7 592 2840 0 6 0 chrUextra 1011506 1011825 -27992831 - QUASIMODO_LTR LTR Gypsy -337 321 1 7 592 817 112 0 0 chrUextra 1011850 1011984 -27992672 - S_DM DNA Tc1 0 1736 1603 7 592 371 161 0 0 chrUextra 1011997 1012053 -27992603 - S_DM DNA Tc1 -374 1362 1307 7 592 7634 42 13 86 chrUextra 1012164 1013382 -27991274 + BATUMI_I LTR Pao 243 1371 -6592 7 592 3580 56 2 5 chrUextra 1013482 1013930 -27990726 - R1_DM LINE R1 -4839 517 71 7 592 682 36 0 0 chrUextra 1013934 1014017 -27990639 - R1_DM LINE R1 -1414 3942 3860 7 592 5788 45 4 6 chrUextra 1013997 1014708 -27989948 - R1_DM LINE R1 -1949 3407 2698 7 592 16862 133 53 5 chrUextra 1014808 1017360 -27987296 - TART_B1 LINE telomeric -4843 5811 3137 7 592 6873 54 21 3 chrUextra 1017460 1018685 -27985971 - HETA LINE telomeric -2166 3915 2928 7 592 6170 27 46 8 chrUextra 1018785 1019531 -27985125 + R1_DM LINE R1 4293 5066 -290 7 592 973 53 0 0 chrUextra 1019528 1019642 -27985014 + R1_DM LINE R1 5243 5356 0 7 592 2636 54 6 6 chrUextra 1019675 1020010 -27984646 + R1_DM LINE R1 1 335 -5021 7 592 5110 14 14 0 chrUextra 1020110 1020688 -27983968 - PROTOP_A DNA P -519 586 1 7 592 4523 75 119 6 chrUextra 1020688 1021333 -27983323 + HMSBEAGLE_I LTR Gypsy 1314 2031 -4498 7 592 9903 32 34 0 chrUextra 1021482 1022659 -27981997 - DMCR1A LINE CR1 0 4470 3254 7 592 3804 47 15 0 chrUextra 1023213 1023681 -27980975 + DOC3_DM LINE Jockey 1421 1895 -2845 7 592 2606 30 7 0 chrUextra 1023680 1023982 -27980674 + DOC3_DM LINE Jockey 2199 2502 -2238 7 592 2986 25 22 3 chrUextra 1024083 1024438 -27980218 - BATUMI_I LTR Pao -7601 362 1 7 592 1964 24 70 16 chrUextra 1024438 1024696 -27979960 - BATUMI_LTR LTR Pao 0 272 1 7 592 21 0 0 0 chrUextra 1024833 1024854 -27979802 + AT_rich Low_complexity Low_complexity 1 21 0 7 592 1925 273 132 10 chrUextra 1025482 1026318 -27978338 + BS LINE Jockey 1861 2798 -2328 7 592 9399 23 45 0 chrUextra 1026728 1027950 -27976706 - FW_DM LINE Jockey -780 3912 2636 7 592 212 0 0 35 chrUextra 1028083 1028112 -27976544 + (TTA)n Simple_repeat Simple_repeat 2 29 0 7 592 1193 139 64 5 chrUextra 1028142 1028345 -27976311 - DNAREP1_DM LINE Penelope -358 236 22 7 592 1396 59 0 0 chrUextra 1029372 1029541 -27975115 - G5_DM LINE Jockey -4684 172 4 7 592 919 87 0 12 chrUextra 1029568 1029738 -27974918 + RSP Satellite Satellite 1 168 0 7 592 805 115 10 19 chrUextra 1029767 1030289 -27974367 + RSP Satellite Satellite 1 517 -8 7 592 807 117 17 17 chrUextra 1030315 1030547 -27974109 + RSP Satellite Satellite 1 232 0 7 592 2423 67 17 17 chrUextra 1030694 1031045 -27973611 - QUASIMODO_I LTR Gypsy -1461 4599 4249 7 592 2095 139 11 28 chrUextra 1031223 1031579 -27973077 - GTWIN_LTR LTR Gypsy -145 350 1 7 592 2814 39 0 0 chrUextra 1031579 1031914 -27972742 - QUASIMODO_I LTR Gypsy -1808 4252 3918 7 592 210 147 14 29 chrUextra 1032410 1032480 -27972176 + (TAAA)n Simple_repeat Simple_repeat 1 69 0 7 592 8209 94 65 0 chrUextra 1033336 1034556 -27970100 - TART_B1 LINE telomeric -7382 3272 1974 7 592 3132 212 26 22 chrUextra 1034656 1035875 -27968781 - SAR_DM Satellite Satellite -218 1223 1 7 592 6558 19 0 0 chrUextra 1035975 1036726 -27967930 - ROO_I LTR Pao -3313 4943 4193 7 592 3948 16 2 0 chrUextra 1036733 1037178 -27967478 + FW_DM LINE Jockey 1748 2193 -2499 7 592 2173 316 38 30 chrUextra 1037294 1038357 -27966299 - NOMAD_I LTR Gypsy -3468 3104 2034 7 592 6057 40 54 30 chrUextra 1038613 1039433 -27965223 + Transib5 DNA Transib 1572 2410 -591 7 592 837 79 18 0 chrUextra 1039436 1039550 -27965106 - DMCR1A LINE CR1 -2 4468 4353 7 592 1366 44 222 4 chrUextra 1039552 1039831 -27964825 - DMCR1A LINE CR1 -236 4234 3895 7 592 710 201 13 25 chrUextra 1039936 1040094 -27964562 + HETRP_DM Satellite Satellite 1529 1684 -188 7 592 705 191 17 58 chrUextra 1040195 1040367 -27964289 + HETRP_DM Satellite Satellite 1518 1682 -190 7 592 704 226 6 30 chrUextra 1040497 1040666 -27963990 + HETRP_DM Satellite Satellite 1518 1682 -190 7 592 715 190 11 69 chrUextra 1040769 1040944 -27963712 + HETRP_DM Satellite Satellite 1518 1682 -190 7 592 282 29 0 0 chrUextra 1041061 1041096 -27963560 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 592 236 132 0 0 chrUextra 1041096 1041134 -27963522 + HETRP_DM Satellite Satellite 1549 1586 -286 7 592 1154 21 107 0 chrUextra 1041979 1042119 -27962537 + PROTOP_B DNA P 1 155 -998 7 592 2515 82 3 26 chrUextra 1042117 1042466 -27962190 + Gypsy12_I LTR Gypsy 4657 4997 -549 7 592 3551 177 86 2 chrUextra 1042567 1043783 -27960873 + ROVER-I_DM LTR Gypsy 3966 5283 -1301 7 592 21 57 0 0 chrUextra 1044384 1044419 -27960237 + AT_rich Low_complexity Low_complexity 1 35 0 7 592 1077 196 64 0 chrUextra 1044569 1044819 -27959837 - DNAREP1_DM LINE Penelope -328 266 1 7 592 5262 29 30 2 chrUextra 1045201 1046418 -27958238 - MDG1_I LTR Gypsy -1359 5237 3987 7 592 6181 7 49 0 chrUextra 1046518 1047214 -27957442 + Gypsy6_I LTR Gypsy 6281 7010 -2 7 592 3709 15 0 0 chrUextra 1047217 1047624 -27957032 + Gypsy6_LTR LTR Gypsy 1 407 0 7 592 994 0 0 9 chrUextra 1047624 1047735 -27956921 + SSU-rRNA_Dme rRNA rRNA 1822 1931 -64 7 9 6032 5 3 0 chrUextra 1048382 1049052 -27955604 + Gypsy5_I LTR Gypsy 5622 6293 -216 7 593 5354 50 0 5 chrUextra 1050467 1051137 -27953519 + DOC3_DM LINE Jockey 185 851 -3889 7 593 2075 36 4 0 chrUextra 1051134 1051383 -27953273 + DOC3_DM LINE Jockey 1016 1265 -3475 7 593 2356 41 34 0 chrUextra 1051388 1051680 -27952976 + DOC3_DM LINE Jockey 1647 1948 -2792 7 593 9042 45 59 6 chrUextra 1051782 1052997 -27951659 + DOC3_DM LINE Jockey 3326 4704 -36 7 593 3520 20 0 0 chrUextra 1053097 1053494 -27951162 + R1_DM LINE R1 4960 5356 0 7 593 6042 56 65 0 chrUextra 1053527 1054311 -27950345 + R1_DM LINE R1 1 835 -4521 7 593 1040 21 135 7 chrUextra 1054411 1054552 -27950104 + ROO_I LTR Pao 5128 5286 -2970 7 593 4579 43 19 2 chrUextra 1054532 1055097 -27949559 + ROO_I LTR Pao 5430 6004 -2252 7 593 362 24 0 0 chrUextra 1055094 1055135 -27949521 + ROO_I LTR Pao 6222 6262 -1994 7 593 4114 30 0 0 chrUextra 1055130 1055625 -27949031 + ROO_I LTR Pao 6445 6939 -1317 7 593 2649 205 163 4 chrUextra 1057041 1058160 -27946496 - DMRT1A LINE R1 -261 4922 3640 7 593 189 74 0 0 chrUextra 1058160 1058187 -27946469 + (TATG)n Simple_repeat Simple_repeat 3 29 0 7 593 1300 158 90 5 chrUextra 1058187 1058249 -27946407 - DMRT1A LINE R1 -1544 3639 3558 7 593 1684 311 12 11 chrUextra 1058351 1058923 -27945733 - NINJA_I LTR Pao -4454 1557 985 7 593 680 89 9 65 chrUextra 1060165 1060273 -27944383 - Baggins1 LINE LOA -262 5191 5090 7 593 442 88 0 0 chrUextra 1060273 1060330 -27944326 - Baggins1 LINE LOA -606 4847 4791 7 593 621 35 0 140 chrUextra 1060775 1060875 -27943781 - Baggins1 LINE LOA 0 5453 5368 7 593 4380 33 16 0 chrUextra 1060993 1061583 -27943073 + PROTOP_A DNA P 570 1105 0 7 593 27 29 0 0 chrUextra 1061834 1061868 -27942788 + AT_rich Low_complexity Low_complexity 1 34 0 7 593 9745 34 46 7 chrUextra 1062286 1063497 -27941159 - CIRCE LINE Composite -2944 3412 2155 7 593 1755 43 197 0 chrUextra 1063598 1063832 -27940824 + Baggins1 LINE LOA 5062 5341 -112 7 593 1309 68 288 18 chrUextra 1063827 1064053 -27940603 + ROOA_I LTR Pao 1489 1775 -5074 7 593 931 59 8 0 chrUextra 1064048 1064166 -27940490 + ROOA_I LTR Pao 1962 2080 -4769 7 593 3819 57 377 0 chrUextra 1064156 1064808 -27939848 + Baggins1 LINE LOA 588 1485 -3968 7 593 5679 13 0 0 chrUextra 1064908 1065526 -27939130 + MICROPIA_I LTR Gypsy 1902 2519 -1957 7 593 5452 5 0 7 chrUextra 1065521 1066118 -27938538 + MICROPIA_I LTR Gypsy 2812 3404 -1072 7 593 1928 32 0 0 chrUextra 1066218 1066439 -27938217 + R1_DM LINE R1 3439 3659 -1697 7 593 4554 29 2 0 chrUextra 1066437 1066960 -27937696 + R1_DM LINE R1 4833 5356 0 7 593 3288 65 58 0 chrUextra 1066993 1067426 -27937230 + R1_DM LINE R1 1 458 -4898 7 593 5797 200 37 9 chrUextra 1067534 1068737 -27935919 + TAHRE LINE telomeric 587 1822 -8641 7 593 4279 187 17 27 chrUextra 1068837 1070046 -27934610 - SAR_DM Satellite Satellite -259 1197 1 7 593 4714 22 2 11 chrUextra 1071455 1072001 -27932655 + R1_DM LINE R1 4526 5066 -290 7 593 1022 26 0 0 chrUextra 1071998 1072112 -27932544 + R1_DM LINE R1 5243 5356 0 7 593 4064 66 34 4 chrUextra 1072133 1072664 -27931992 + R1_DM LINE R1 23 569 -4787 7 593 2609 51 3 0 chrUextra 1072764 1073080 -27931576 - Baggins1 LINE LOA -346 5107 4791 7 593 2647 27 109 40 chrUextra 1073354 1073701 -27930955 - Baggins1 LINE LOA 0 5453 5083 7 593 2450 11 0 0 chrUextra 1073704 1073973 -27930683 - NINJA_I LTR Pao -1290 4721 4453 7 593 2537 68 0 3 chrUextra 1074073 1074405 -27930251 + IDEFIX_I LTR Gypsy 3854 4184 -1444 7 593 2420 18 18 0 chrUextra 1074405 1074690 -27929966 + IDEFIX_LTR LTR Gypsy 1 290 -304 7 593 4510 72 10 5 chrUextra 1074693 1075282 -27929374 - BS LINE Jockey -3928 1198 607 7 593 3422 138 7 14 chrUextra 1075384 1075952 -27928704 + TAHRE LINE telomeric 9884 10447 -16 7 593 361 77 0 19 chrUextra 1075942 1075995 -27928661 + TAHRE LINE telomeric 10406 10457 -6 7 593 3509 86 6 24 chrUextra 1075983 1076590 -27928066 + HETA LINE telomeric 1 631 -5450 7 593 224 185 31 0 chrUextra 1076742 1076807 -27927849 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 593 220 141 46 15 chrUextra 1077267 1077332 -27927324 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 593 22 35 0 0 chrUextra 1077525 1077554 -27927102 + AT_rich Low_complexity Low_complexity 1 29 0 7 593 46 19 0 0 chrUextra 1077847 1077900 -27926756 + AT_rich Low_complexity Low_complexity 1 53 0 7 593 1126 28 0 20 chrUextra 1078000 1078146 -27926510 - BLASTOPIA_LTR LTR Gypsy -132 143 1 7 593 5753 2 56 0 chrUextra 1078146 1079209 -27925447 - BLASTOPIA_I LTR Gypsy 0 4481 3359 7 593 2142 254 4 9 chrUextra 1079309 1079838 -27924818 + TABOR_I LTR Gypsy 3783 4308 -2028 7 593 2783 203 16 26 chrUextra 1079830 1080517 -27924139 + Stalker2_I LTR Gypsy 5041 5720 -1682 7 593 223 240 0 0 chrUextra 1081744 1081794 -27922862 + CT-rich Low_complexity Low_complexity 1 50 0 7 593 2581 107 23 21 chrUextra 1081925 1083133 -27921523 + DMSAT6 Satellite Satellite 1 1210 -48 7 593 3770 61 4 6 chrUextra 1083233 1083712 -27920944 - R1_DM LINE R1 -3982 1374 897 7 593 1228 81 70 0 chrUextra 1083709 1083894 -27920762 - R1_DM LINE R1 -4566 790 593 7 593 1359 85 16 0 chrUextra 1083892 1084081 -27920575 - R1_DM LINE R1 -5164 192 1 7 593 2881 12 6 3 chrUextra 1084114 1084441 -27920215 - R1_DM LINE R1 0 5356 5029 7 593 10941 3 0 0 chrUextra 1084541 1085749 -27918907 - ACCORD_I LTR Gypsy -3744 2544 1337 7 593 324 250 45 0 chrUextra 1085879 1085967 -27918689 - DIVER2_I LTR Pao -34 4113 4022 7 593 301 114 0 0 chrUextra 1086173 1086217 -27918439 + DNAREP1_DM LINE Penelope 1 44 -550 7 593 6281 63 48 8 chrUextra 1086222 1087057 -27917599 - M4DM DNA Transib -336 1099 232 7 593 5548 24 20 2 chrUextra 1087157 1088365 -27916291 + FW_DM LINE Jockey 737 1962 -2384 7 593 1094 29 0 0 chrUextra 1088465 1088603 -27916053 + DOC2_DM LINE Jockey 4654 4791 -2 7 593 757 99 0 0 chrUextra 1089291 1089392 -27915264 + Gypsy9_LTR LTR Gypsy 1 101 -235 7 593 1105 76 159 74 chrUextra 1089395 1089652 -27915004 + Gypsy9_I LTR Gypsy 75 353 -4324 7 593 1974 13 4 13 chrUextra 1089772 1090002 -27914654 + BATUMI_I LTR Pao 6774 7001 -962 7 593 7968 68 62 4 chrUextra 1089840 1090979 -27913677 - BATUMI_I LTR Pao -1063 6851 5414 7 593 3061 135 16 0 chrUextra 1091079 1091530 -27913126 + Gypsy_I LTR Gypsy 6050 6507 0 7 593 437 149 0 0 chrUextra 1091530 1091597 -27913059 + Gypsy_LTR LTR Gypsy 1 67 -415 7 593 449 88 44 0 chrUextra 1091594 1091662 -27912994 + DNAREP1_DM LINE Penelope 522 592 -2 7 593 423 117 0 0 chrUextra 1091953 1092013 -27912643 + FB4_DM DNA Tc1 1018 1077 -3012 7 593 924 128 5 11 chrUextra 1092038 1092227 -27912429 - S_DM DNA Tc1 0 1736 1549 7 593 2463 68 0 3 chrUextra 1092385 1092697 -27911959 + BS3_DM LINE Jockey 106 416 -1374 7 593 1607 69 10 0 chrUextra 1092693 1092896 -27911760 + BS3_DM LINE Jockey 526 730 -1060 7 593 757 22 0 0 chrUextra 1092908 1092997 -27911659 + BS3_DM LINE Jockey 1458 1546 -244 7 593 3999 90 5 19 chrUextra 1093005 1093591 -27911065 + DM297_I LTR Gypsy 2179 2756 -3411 7 593 10452 15 3 7 chrUextra 1093691 1094896 -27909760 - Gypsy4_I LTR Gypsy -942 5346 4146 7 593 4889 0 2 0 chrUextra 1094996 1095526 -27909130 + IVK_DM LINE I 4870 5400 -2 7 593 192 40 0 0 chrUextra 1095964 1095989 -27908667 + (TTA)n Simple_repeat Simple_repeat 1 25 0 7 593 30 27 0 0 chrUextra 1096106 1096143 -27908513 + AT_rich Low_complexity Low_complexity 1 37 0 7 593 10351 27 2 2 chrUextra 1096303 1097506 -27907150 - R1_DM LINE R1 -1267 4089 2886 7 593 3444 0 0 0 chrUextra 1097606 1097978 -27906678 + Copia_I LTR Copia 4222 4593 0 7 593 2302 0 30 0 chrUextra 1097978 1098246 -27906410 + Copia_LTR LTR Copia 1 276 0 7 593 10246 23 30 1 chrUextra 1098910 1100112 -27904544 - FW_DM LINE Jockey -1199 3493 2257 7 593 10489 28 0 0 chrUextra 1100214 1101418 -27903238 + G2_DM LINE Jockey 1656 2859 -243 7 593 4964 4 0 2 chrUextra 1101518 1102063 -27902593 - FW_DM LINE Jockey -4148 544 1 7 593 5684 3 1 0 chrUextra 1102074 1102720 -27901936 + STALKER4_I LTR Gypsy 2909 3555 -2975 7 593 1153 288 14 9 chrUextra 1103097 1103447 -27901209 - BS LINE Jockey -2393 2733 2382 7 593 674 297 8 28 chrUextra 1103436 1103689 -27900967 - BS LINE Jockey -2860 2266 2019 7 593 272 243 14 0 chrUextra 1103718 1103788 -27900868 + DIVER2_I LTR Pao 3058 3128 -1019 7 593 482 314 66 9 chrUextra 1103791 1104003 -27900653 + DIVER2_I LTR Pao 3432 3655 -492 7 593 5226 2 0 2 chrUextra 1104126 1104695 -27899961 - POGO DNA Pogo -1553 568 1 7 593 201 121 0 0 chrUextra 1104836 1104869 -27899787 + (TC)n Simple_repeat Simple_repeat 1 33 0 7 593 5453 3 0 0 chrUextra 1105429 1106023 -27898633 - QUASIMODO_LTR LTR Gypsy -64 594 1 7 593 555 0 130 5 chrUextra 1106243 1106629 -27898027 + (TA)n Simple_repeat Simple_repeat 1 434 0 7 593 830 139 0 17 chrUextra 1106740 1107032 -27897624 + RSP Satellite Satellite 1 287 0 7 593 921 126 8 17 chrUextra 1107072 1107815 -27896841 + RSP Satellite Satellite 1 736 0 7 593 310 149 0 0 chrUextra 1107855 1107902 -27896754 + RSP Satellite Satellite 72 118 0 7 593 4564 23 4 0 chrUextra 1108033 1108552 -27896104 + R1_DM LINE R1 4480 5000 -356 7 593 579 54 0 0 chrUextra 1108555 1108629 -27896027 + R1_DM LINE R1 95 168 -5188 7 593 4877 40 16 11 chrUextra 1108627 1109235 -27895421 + R1_DM LINE R1 638 1248 -4108 7 593 10351 30 25 0 chrUextra 1109335 1110537 -27894119 - R1_DM LINE R1 -2734 2622 1391 7 593 270 54 0 0 chrUextra 1111024 1111061 -27893595 - PROTOP_B DNA P 0 1153 1117 7 593 3756 77 72 102 chrUextra 1111126 1111838 -27892818 - PROTOP_B DNA P 0 1153 464 7 593 8314 70 52 29 chrUextra 1111938 1113138 -27891518 + Gypsy7_I LTR Gypsy 2118 3345 -1639 7 593 5127 60 42 39 chrUextra 1113238 1113935 -27890721 - CIRCE LINE Composite -5657 699 1 7 593 4016 36 48 0 chrUextra 1113962 1114438 -27890218 - CIRCE LINE Composite -79 6277 5779 7 593 1252 147 130 44 chrUextra 1114753 1115053 -27889603 - DNAREP1_DM LINE Penelope -201 393 83 7 593 231 37 0 0 chrUextra 1115142 1115169 -27889487 - DNAREP1_DM LINE Penelope -532 62 36 7 593 3353 8 3 3 chrUextra 1115838 1116230 -27888426 + DOC LINE Jockey 4334 4725 0 7 593 241 0 0 0 chrUextra 1116230 1116256 -27888400 - ROO_I LTR Pao -4037 4219 4194 7 593 1005 33 0 0 chrUextra 1116264 1116384 -27888272 + FW_DM LINE Jockey 1748 1867 -2825 7 593 2327 178 20 81 chrUextra 1116389 1117031 -27887625 - TART_B1 LINE telomeric -9020 1634 1032 7 593 3485 77 24 61 chrUextra 1117150 1117692 -27886964 + Gypsy8_I LTR Gypsy 1207 1728 -2619 7 593 533 117 8 48 chrUextra 1117676 1117802 -27886854 - DMSAT6 Satellite Satellite -71 399 279 7 593 3732 32 0 0 chrUextra 1117903 1118336 -27886320 + DMCR1A LINE CR1 2096 2528 -1942 7 593 6655 99 64 69 chrUextra 1118436 1119616 -27885040 - R1_DM LINE R1 -4181 1175 1 7 593 821 21 0 0 chrUextra 1119735 1119830 -27884826 - Stalker2_I LTR Gypsy -7307 95 1 7 593 3872 0 0 2 chrUextra 1119830 1120255 -27884401 - Stalker2_LTR LTR Gypsy 0 424 1 7 593 564 204 15 29 chrUextra 1120304 1120440 -27884216 - HETRP_DM Satellite Satellite -190 1682 1549 7 593 210 37 0 0 chrUextra 1120440 1120467 -27884189 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 593 366 162 112 0 chrUextra 1120615 1120695 -27883961 + DNAREP1_DM LINE Penelope 67 155 -439 7 593 1345 181 103 37 chrUextra 1121088 1121438 -27883218 - Gypsy12A_LTR LTR Gypsy -1760 520 148 7 593 5868 47 74 5 chrUextra 1121438 1122233 -27882423 - PROTOP_B DNA P -38 1115 266 7 593 192 135 0 0 chrUextra 1122918 1122955 -27881701 + (A)n Simple_repeat Simple_repeat 1 37 0 7 593 23 54 0 0 chrUextra 1123354 1123391 -27881265 + AT_rich Low_complexity Low_complexity 1 37 0 7 593 1894 40 0 13 chrUextra 1123632 1123862 -27880794 + PROTOP DNA P 4254 4480 0 7 593 802 126 154 0 chrUextra 1123862 1124005 -27880651 - DNAREP1_DM LINE Penelope -20 574 410 7 593 515 100 0 0 chrUextra 1123999 1124069 -27880587 - DNAREP1_DM LINE Penelope -490 104 35 7 593 2274 258 0 0 chrUextra 1124930 1125485 -27879171 - G6_DM LINE Jockey -849 1193 639 7 593 356 0 0 0 chrUextra 1125483 1125524 -27879132 - ROVER-LTR_DM LTR Gypsy -326 41 1 7 593 21 0 0 0 chrUextra 1125554 1125575 -27879081 + AT_rich Low_complexity Low_complexity 1 21 0 7 593 5434 8 0 0 chrUextra 1126228 1126833 -27877823 + DOC LINE Jockey 4121 4725 0 7 593 2831 183 7 12 chrUextra 1126830 1127426 -27877230 + SAR_DM Satellite Satellite 218 810 -662 7 593 11129 2 11 0 chrUextra 1127526 1128723 -27875933 + MICROPIA_I LTR Gypsy 1991 3200 -1276 7 593 21 89 0 0 chrUextra 1129501 1129557 -27875099 + AT_rich Low_complexity Low_complexity 1 56 0 7 593 23 68 0 0 chrUextra 1129595 1129639 -27875017 + AT_rich Low_complexity Low_complexity 1 44 0 7 593 28 71 0 0 chrUextra 1129685 1129741 -27874915 + AT_rich Low_complexity Low_complexity 1 56 0 7 593 1023 51 36 0 chrUextra 1129880 1130017 -27874639 - PROTOP_A DNA P -592 513 372 7 593 26 82 0 0 chrUextra 1130445 1130506 -27874150 + AT_rich Low_complexity Low_complexity 1 61 0 7 593 279 303 0 0 chrUextra 1131244 1131310 -27873346 - DIVER2_I LTR Pao -165 3982 3917 7 593 477 307 76 55 chrUextra 1131427 1132009 -27872647 - Gypsy5_I LTR Gypsy -2192 4317 4028 7 593 1591 293 15 14 chrUextra 1132025 1132614 -27872042 - ZAM_I LTR Gypsy -3244 4246 3657 7 593 10053 24 50 1 chrUextra 1132714 1133910 -27870746 - DMCR1A LINE CR1 -972 3498 2244 7 593 10710 5 8 1 chrUextra 1134010 1135206 -27869450 - Invader2_I LTR Gypsy -2673 1919 716 7 593 10379 9 19 0 chrUextra 1136602 1137798 -27866858 - QUASIMODO_I LTR Gypsy -4126 1934 716 7 593 754 34 0 0 chrUextra 1138423 1138511 -27866145 - NINJA_LTR LTR Pao -1 316 229 7 593 343 269 26 53 chrUextra 1138513 1138627 -27866029 + Gypsy4_I LTR Gypsy 946 1132 -5156 7 593 1098 121 88 16 chrUextra 1138651 1138845 -27865811 + DMCR1A LINE CR1 454 661 -3809 7 593 4463 195 20 22 chrUextra 1139200 1140388 -27864268 + SAR_DM Satellite Satellite 1 1185 -208 7 593 5078 2 0 2 chrUextra 1140488 1141058 -27863598 + HMSBEAGLE_I LTR Gypsy 55 623 -5906 7 593 5945 0 0 0 chrUextra 1141045 1141683 -27862973 + HMSBEAGLE_I LTR Gypsy 3065 3702 -2827 7 593 5513 28 78 1 chrUextra 1141783 1142978 -27861678 - R1_DM LINE R1 -1137 4219 2933 7 593 5422 12 5 0 chrUextra 1143078 1143677 -27860979 + Copia2_I LTR Copia 2607 3208 -954 7 593 552 42 0 0 chrUextra 1143683 1143754 -27860902 + (TTA)n Simple_repeat Simple_repeat 2 72 0 7 593 585 52 32 75 chrUextra 1143758 1143945 -27860711 + (TAA)n Simple_repeat Simple_repeat 1 179 0 7 593 345 86 77 35 chrUextra 1143919 1144088 -27860568 + (TATAA)n Simple_repeat Simple_repeat 3 178 0 7 593 1209 78 0 0 chrUextra 1144093 1144272 -27860384 + (TTA)n Simple_repeat Simple_repeat 2 180 0 7 593 691 197 13 26 chrUextra 1144383 1144539 -27860117 + HETRP_DM Satellite Satellite 1529 1682 -190 7 593 683 208 13 25 chrUextra 1144658 1144816 -27859840 + HETRP_DM Satellite Satellite 1529 1684 -188 7 593 677 205 11 67 chrUextra 1144917 1145095 -27859561 + HETRP_DM Satellite Satellite 1518 1685 -187 7 593 192 40 0 0 chrUextra 1145236 1145261 -27859395 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 593 564 199 22 30 chrUextra 1145261 1145396 -27859260 + HETRP_DM Satellite Satellite 1549 1682 -190 7 593 192 40 0 0 chrUextra 1145540 1145565 -27859091 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 593 228 154 51 0 chrUextra 1145717 1145756 -27858900 + Invader6_I LTR Gypsy 670 710 -3389 7 593 537 328 17 4 chrUextra 1145961 1146197 -27858459 + MICROPIA_I LTR Gypsy 907 1145 -3331 7 593 5084 55 15 8 chrUextra 1146201 1146860 -27857796 + S_DM DNA Tc1 1 664 -1072 7 593 4493 112 50 1 chrUextra 1146960 1147615 -27857041 - Gypsy_I LTR Gypsy -358 6149 5463 7 593 246 139 0 0 chrUextra 1147616 1147659 -27856997 + G6_DM LINE Jockey 1 43 -1999 7 593 8739 22 8 84 chrUextra 1148254 1149448 -27855208 + G_DM LINE Jockey 8 1111 -3235 7 593 2003 87 45 65 chrUextra 1149548 1149904 -27854752 - ROVER-LTR_DM LTR Gypsy -18 349 1 7 593 2159 21 0 0 chrUextra 1149904 1150146 -27854510 - CIRCE LINE Composite -1983 4373 4132 7 593 5013 32 7 5 chrUextra 1150148 1150741 -27853915 - CIRCE LINE Composite -2704 3652 3059 7 593 4677 72 15 5 chrUextra 1150841 1151451 -27853205 - Gypsy7_I LTR Gypsy -1701 3283 2668 7 593 4363 64 29 3 chrUextra 1151450 1152034 -27852622 - Gypsy7_I LTR Gypsy -2993 1991 1393 7 593 2063 93 142 27 chrUextra 1152345 1152710 -27851946 + FW3_DM LINE Jockey 95 501 -2631 7 593 657 326 21 49 chrUextra 1152710 1152997 -27851659 + NOMAD_I LTR Gypsy 6162 6440 -132 7 593 850 167 30 143 chrUextra 1152968 1153233 -27851423 + Gypsy12A_LTR LTR Gypsy 1180 1414 -866 7 593 832 123 8 0 chrUextra 1153429 1153559 -27851097 + DM297_I LTR Gypsy 4901 5031 -1136 7 593 193 0 94 0 chrUextra 1153749 1153781 -27850875 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 7 593 850 167 30 143 chrUextra 1154146 1154411 -27850245 - Gypsy12A_LTR LTR Gypsy -866 1414 1180 7 593 552 311 25 59 chrUextra 1154382 1154618 -27850038 - NOMAD_I LTR Gypsy -132 6440 6213 7 593 3429 22 180 0 chrUextra 1154720 1155258 -27849398 + R1_DM LINE R1 4057 4691 -665 7 593 1650 54 0 5 chrUextra 1155248 1155454 -27849202 + R1_DM LINE R1 5034 5238 -118 7 593 3500 65 2 23 chrUextra 1155437 1155913 -27848743 + R1_DM LINE R1 224 689 -4667 7 593 1491 58 16 0 chrUextra 1156278 1156467 -27848189 - PROTOP_B DNA P 0 1153 962 7 593 1025 138 76 76 chrUextra 1156510 1156800 -27847856 - Gypsy_LTR LTR Gypsy -46 436 147 7 593 5701 3 0 0 chrUextra 1157306 1157919 -27846737 + LSU-rRNA_Dme rRNA rRNA 1975 2587 -1313 7 593 5384 7 0 0 chrUextra 1157910 1158498 -27846158 + R2_DM LINE R2 2522 3109 -498 7 593 10263 22 29 0 chrUextra 1158598 1159790 -27844866 + FW_DM LINE Jockey 1551 2776 -1916 7 593 611 186 45 57 chrUextra 1160130 1160340 -27844316 + DMTOM1_LTR LTR Gypsy 284 488 -19 7 593 426 100 14 28 chrUextra 1160331 1160403 -27844253 + DMTOM1_LTR LTR Gypsy 340 410 0 7 593 524 81 207 0 chrUextra 1160689 1160776 -27843880 + DNAREP1_DM LINE Penelope 426 530 -64 7 593 5513 192 15 17 chrUextra 1161189 1162372 -27842284 - HETA LINE telomeric -1815 4266 3086 7 593 3019 99 49 11 chrUextra 1162472 1163115 -27841541 + DMCR1A LINE CR1 3135 4121 -349 7 593 514 239 6 77 chrUextra 1163783 1163964 -27840692 - TOM_I LTR Gypsy -4630 1482 1315 7 593 2135 254 45 41 chrUextra 1164116 1164919 -27839737 - TOM_I LTR Gypsy -5087 1025 199 7 593 10687 6 18 1 chrUextra 1165054 1166245 -27838411 - BS LINE Jockey -2307 2819 1609 7 593 2655 92 45 12 chrUextra 1166346 1167535 -27837121 - DMSAT6 Satellite Satellite 0 1227 1 7 593 3280 46 39 0 chrUextra 1167635 1168233 -27836423 - DOC2_DM LINE Jockey -4133 660 6 7 593 1898 281 32 7 chrUextra 1168239 1168824 -27835832 - TOM_I LTR Gypsy -851 5261 4662 7 593 10622 1 19 0 chrUextra 1168925 1170115 -27834541 - ACCORD_I LTR Gypsy -817 5471 4260 7 593 4426 99 37 0 chrUextra 1170216 1170839 -27833817 + IDEFIX_I LTR Gypsy 1329 1974 -3654 7 593 5085 15 2 0 chrUextra 1171511 1172099 -27832557 + PROTOP_A DNA P 517 1105 0 7 593 5074 30 27 0 chrUextra 1172102 1172694 -27831962 + DMCR1A LINE CR1 1642 2249 -2221 7 593 3237 58 25 0 chrUextra 1172837 1173236 -27831420 - DMCR1A LINE CR1 -3459 1011 603 7 593 731 138 65 0 chrUextra 1173238 1173376 -27831280 - G3_DM LINE Jockey -1467 3138 2992 7 593 2637 96 14 24 chrUextra 1174083 1175268 -27829388 - DMSAT6 Satellite Satellite -5 1173 1 7 593 5197 0 2 2 chrUextra 1175372 1175933 -27828723 + SSU-rRNA_Dme rRNA rRNA 1265 1825 -170 7 593 2198 108 57 62 chrUextra 1175933 1176337 -27828319 + Gypsy6_LTR LTR Gypsy 1 402 -5 7 593 335 233 53 126 chrUextra 1176353 1176559 -27828097 + Gypsy3_I LTR Gypsy 27 217 -5960 7 593 1417 136 58 14 chrUextra 1176660 1176936 -27827720 - DNAREP1_DM LINE Penelope -306 288 1 7 593 502 265 68 18 chrUextra 1176933 1177151 -27827505 - Gypsy_I LTR Gypsy -4497 2010 1797 7 593 271 314 12 0 chrUextra 1177447 1177533 -27827123 - Gypsy_DS LTR Gypsy -6048 1474 1388 7 593 332 212 11 34 chrUextra 1177614 1177702 -27826954 - Gypsy6_LTR LTR Gypsy -168 239 154 7 593 5931 1 0 3 chrUextra 1177948 1178607 -27826049 + G6_DM LINE Jockey 1375 2031 -11 7 593 505 167 0 11 chrUextra 1178625 1178716 -27825940 - HETRP_DM Satellite Satellite -254 1618 1529 7 593 747 184 12 58 chrUextra 1178839 1179012 -27825644 - HETRP_DM Satellite Satellite -190 1682 1518 7 74 4764 22 0 4 chrUextra 1179236 1179784 -27824872 - PROTOP DNA P -3934 546 1 7 594 470 117 0 13 chrUextra 1180542 1180620 -27824036 + DNAREP1_DM LINE Penelope 354 430 -164 7 594 371 92 0 167 chrUextra 1180639 1180717 -27823939 - Invader1_LTR LTR Gypsy 0 423 359 7 594 2799 76 14 0 chrUextra 1180715 1181069 -27823587 - Invader1_I LTR Gypsy -2361 825 467 7 594 562 134 10 10 chrUextra 1181084 1181182 -27823474 - Invader1_LTR LTR Gypsy -90 333 236 7 594 545 137 9 89 chrUextra 1181189 1181301 -27823355 - Invader1_LTR LTR Gypsy -320 103 1 7 594 367 172 58 0 chrUextra 1181342 1181429 -27823227 - DNAREP1_DM LINE Penelope 0 594 503 7 594 1560 9 0 0 chrUextra 1181812 1182026 -27822630 + (TTATA)n Simple_repeat Simple_repeat 1 214 0 7 594 2409 36 103 0 chrUextra 1182026 1182327 -27822329 + DM1731_LTR LTR Copia 5 336 0 7 594 945 9 9 0 chrUextra 1182327 1182434 -27822222 + DM1731_I LTR Copia 1 108 -3868 7 594 5030 7 5 9 chrUextra 1182438 1183000 -27821656 + DM1731_I LTR Copia 3326 3885 -91 7 594 5176 156 44 11 chrUextra 1184387 1185574 -27819082 + BATUMI_I LTR Pao 3994 5208 -2706 7 594 336 100 17 0 chrUextra 1185674 1185734 -27818922 - ROVER-I_DM LTR Gypsy -371 6213 6153 7 594 736 218 0 11 chrUextra 1185929 1186105 -27818551 - ROVER-I_DM LTR Gypsy -421 6163 5990 7 594 4069 158 72 4 chrUextra 1186140 1186858 -27817798 - ROVER-I_DM LTR Gypsy -1276 5308 4542 7 594 939 66 16 0 chrUextra 1186960 1187081 -27817575 + DOC3_DM LINE Jockey 1773 1895 -2845 7 594 9035 31 25 4 chrUextra 1187080 1188146 -27816510 + DOC3_DM LINE Jockey 2199 3287 -1453 7 594 5814 13 0 2 chrUextra 1188246 1189432 -27815224 + Invader2_I LTR Gypsy 2793 4062 -530 7 594 1943 0 0 0 chrUextra 1189532 1189740 -27814916 + NOMAD_I LTR Gypsy 6365 6572 0 7 594 3739 5 0 0 chrUextra 1189740 1190145 -27814511 + NOMAD_LTR LTR Gypsy 114 518 0 7 594 1634 322 4 6 chrUextra 1190158 1190708 -27813948 - Gypsy6_I LTR Gypsy -172 6840 6292 7 594 2204 207 24 48 chrUextra 1190818 1191365 -27813291 - Gypsy12_LTR LTR Gypsy -1802 534 1 7 594 4726 83 47 2 chrUextra 1191364 1191988 -27812668 - Gypsy12_I LTR Gypsy 0 5546 4895 7 594 232 330 35 9 chrUextra 1192222 1192335 -27812321 + Copia2_I LTR Copia 116 231 -3931 7 594 2807 170 193 37 chrUextra 1193389 1194303 -27810353 - TART LINE telomeric -6807 7670 6734 7 594 354 192 38 91 chrUextra 1194335 1194492 -27810164 - TART LINE telomeric -8372 6105 6004 7 594 252 277 0 30 chrUextra 1194507 1194574 -27810082 - TART LINE telomeric -10047 607 543 7 594 1989 9 0 0 chrUextra 1194674 1194902 -27809754 + DM297_I LTR Gypsy 5940 6167 0 7 594 3575 5 7 10 chrUextra 1194902 1195317 -27809339 + DM297_LTR LTR Gypsy 1 414 0 7 594 312 266 2 0 chrUextra 1195509 1195604 -27809052 - Gypsy2_I LTR Gypsy -3301 2834 2758 7 594 27 0 0 0 chrUextra 1195618 1195645 -27809011 + AT_rich Low_complexity Low_complexity 1 27 0 7 594 396 182 73 24 chrUextra 1195694 1195858 -27808798 - DMCR1A LINE CR1 -2090 2380 2108 7 594 1321 47 59 0 chrUextra 1195959 1196129 -27808527 - R1_DM LINE R1 -4719 637 458 7 594 3290 16 0 0 chrUextra 1196124 1196495 -27808161 - R1_DM LINE R1 -1107 4249 3879 7 594 4473 28 0 0 chrUextra 1196492 1197001 -27807655 - R1_DM LINE R1 -1714 3642 3134 7 594 1216 52 6 6 chrUextra 1196987 1197143 -27807513 - R1_DM LINE R1 -3063 2293 2138 7 594 9566 28 12 22 chrUextra 1197243 1198427 -27806229 + DOC2_DM LINE Jockey 588 1759 -3034 7 594 1228 260 31 53 chrUextra 1198572 1199059 -27805597 + FROGGER_I LTR Copia 1562 2037 -40 7 594 1587 25 0 0 chrUextra 1199297 1199614 -27805042 + (TTA)n Simple_repeat Simple_repeat 1 317 0 7 594 634 62 268 0 chrUextra 1199614 1199711 -27804945 - IVK_DM LINE I -1235 4167 4045 7 594 1500 6 0 0 chrUextra 1199811 1199976 -27804680 - DOC LINE Jockey -1090 3635 3471 7 594 3049 67 212 4 chrUextra 1199982 1200758 -27803898 - DOC4_DM LINE Jockey -940 1851 914 7 594 2779 290 59 21 chrUextra 1201191 1202279 -27802377 + DMRT1A LINE R1 711 1839 -3344 7 594 656 312 64 9 chrUextra 1203134 1203477 -27801179 + Gypsy5_I LTR Gypsy 2195 2556 -3953 7 594 299 296 0 0 chrUextra 1203471 1203552 -27801104 + Gypsy5_I LTR Gypsy 2747 2827 -3682 7 594 7698 8 25 2 chrUextra 1203662 1204719 -27799937 - DMRT1B LINE R1 -3294 1889 713 7 594 478 0 0 0 chrUextra 1204720 1204774 -27799882 - QUASIMODO_LTR LTR Gypsy -604 54 1 7 594 664 0 0 0 chrUextra 1204774 1204845 -27799811 - QUASIMODO_I LTR Gypsy 0 6060 5990 7 594 6571 28 100 0 chrUextra 1204945 1206128 -27798528 - IDEFIX_I LTR Gypsy -3984 1644 344 7 594 6596 14 14 0 chrUextra 1206228 1206996 -27797660 - STALKER4_I LTR Gypsy -1098 5432 4654 7 594 3828 5 0 5 chrUextra 1206988 1207411 -27797245 - STALKER4_I LTR Gypsy -2290 4240 3820 7 594 3046 20 0 17 chrUextra 1207511 1207872 -27796784 - DM412 LTR Gypsy -6542 355 1 7 594 4149 8 0 66 chrUextra 1207557 1208072 -27796584 - T412LTR LTR LTR 0 481 1 7 594 562 0 0 0 chrUextra 1208793 1208863 -27795793 + TABOR_I LTR Gypsy 6267 6336 0 7 594 4681 6 0 0 chrUextra 1208861 1209367 -27795289 + TABOR_LTR LTR Gypsy 1 506 0 7 594 5224 28 16 0 chrUextra 1209367 1209975 -27794681 + DMCR1A LINE CR1 3143 3760 -710 7 594 3485 109 78 2 chrUextra 1210075 1210607 -27794049 - Invader1_I LTR Gypsy -715 2471 1899 7 594 4562 52 60 23 chrUextra 1210607 1211257 -27793399 + PROTOP DNA P 1 674 -3806 7 594 1006 169 14 34 chrUextra 1211410 1211618 -27793038 - LINEJ1_DM LINE Jockey -2508 2512 2309 7 594 7298 29 53 24 chrUextra 1211627 1212539 -27792117 + DMCR1A LINE CR1 1 938 -3532 7 594 2716 88 23 19 chrUextra 1212639 1213820 -27790836 - DMSAT6 Satellite Satellite -394 1186 1 7 594 2397 15 0 0 chrUextra 1213920 1214192 -27790464 - Copia2_I LTR Copia -3890 272 1 7 594 1717 10 10 0 chrUextra 1214192 1214388 -27790268 - Copia2_LTR_DM LTR Copia 0 198 1 7 594 1467 28 0 0 chrUextra 1214388 1214568 -27790088 + (TAA)n Simple_repeat Simple_repeat 1 180 0 7 594 1383 60 0 0 chrUextra 1214586 1214903 -27789753 + (TAA)n Simple_repeat Simple_repeat 1 317 0 7 594 336 76 105 25 chrUextra 1214907 1215069 -27789587 + (TTATA)n Simple_repeat Simple_repeat 3 177 0 7 594 25 0 0 0 chrUextra 1215076 1215101 -27789555 + AT_rich Low_complexity Low_complexity 1 25 0 7 594 4595 30 15 0 chrUextra 1215201 1215740 -27788916 - DMRT1B LINE R1 -4494 689 143 7 594 271 327 67 36 chrUextra 1216155 1216380 -27788276 + MICROPIA_I LTR Gypsy 1 232 -2181 7 594 4118 193 25 25 chrUextra 1216481 1217661 -27786995 - SAR_DM Satellite Satellite -430 1180 1 7 594 2597 115 11 11 chrUextra 1217765 1218312 -27786344 + G6_DM LINE Jockey 1739 2042 0 7 594 759 178 13 26 chrUextra 1219061 1219217 -27785439 - HETRP_DM Satellite Satellite -190 1682 1529 7 594 744 211 12 18 chrUextra 1219375 1219544 -27785112 - HETRP_DM Satellite Satellite -187 1685 1518 7 594 555 204 15 29 chrUextra 1219674 1219810 -27784846 - HETRP_DM Satellite Satellite -190 1682 1549 7 594 210 37 0 0 chrUextra 1219810 1219837 -27784819 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 594 358 162 112 0 chrUextra 1219985 1220065 -27784591 + DNAREP1_DM LINE Penelope 67 155 -439 7 594 2873 199 2 35 chrUextra 1220321 1220940 -27783716 - TAHRE LINE telomeric -9475 988 391 7 594 4145 81 11 5 chrUextra 1220941 1221500 -27783156 - TART LINE telomeric -3816 10661 10100 7 594 434 69 0 0 chrUextra 1221900 1221958 -27782698 - DNAREP1_DM LINE Penelope -9 585 528 7 594 655 114 14 64 chrUextra 1221958 1222098 -27782558 - DNAREP1_DM LINE Penelope -263 331 199 7 594 480 132 5 45 chrUextra 1222096 1222223 -27782433 - DNAREP1_DM LINE Penelope -312 282 118 7 594 26 0 0 0 chrUextra 1222240 1222266 -27782390 + AT_rich Low_complexity Low_complexity 1 26 0 7 594 2058 182 82 15 chrUextra 1222290 1222753 -27781903 - HOBO DNA hAT 0 3016 2523 7 594 3593 84 96 3 chrUextra 1223173 1223776 -27780880 + TRANSIB2 DNA Transib 2186 2844 0 7 594 1941 107 0 0 chrUextra 1223777 1224058 -27780598 - DMRT1B LINE R1 -1287 3896 3616 7 594 437 19 0 0 chrUextra 1224158 1224211 -27780445 - LOOPER1_DM DNA PiggyBac -1828 53 1 7 594 593 203 12 120 chrUextra 1224378 1224636 -27780020 - ROVER-I_DM LTR Gypsy -6354 230 1 7 594 506 93 0 0 chrUextra 1224721 1224796 -27779860 - ROVER-LTR_DM LTR Gypsy -220 147 73 7 594 2137 111 22 32 chrUextra 1224812 1225323 -27779333 + QUASIMODO_LTR LTR Gypsy 52 621 -37 7 594 3316 145 3 0 chrUextra 1225436 1226001 -27778655 - HETA LINE telomeric -2654 3427 2861 7 594 22 56 0 0 chrUextra 1226027 1226063 -27778593 + AT_rich Low_complexity Low_complexity 1 36 0 7 594 337 109 15 45 chrUextra 1226063 1226130 -27778526 - TART LINE telomeric -6131 8346 8282 7 594 994 61 0 0 chrUextra 1226128 1226260 -27778396 - HETA LINE telomeric -4584 1497 1366 7 594 2322 96 6 6 chrUextra 1226259 1226614 -27778042 - HETA LINE telomeric -106 5975 5621 7 594 3949 17 0 0 chrUextra 1226714 1227195 -27777461 + NINJA_I LTR Pao 749 1229 -4782 7 594 2148 30 26 0 chrUextra 1227198 1227467 -27777189 + NINJA_I LTR Pao 1400 1675 -4336 7 594 3370 28 2 0 chrUextra 1227463 1227891 -27776765 + NINJA_I LTR Pao 1863 2291 -3720 7 594 5317 43 141 3 chrUextra 1227991 1229166 -27775490 + Baggins1 LINE LOA 2936 4272 -1181 7 594 2374 11 0 4 chrUextra 1229268 1229549 -27775107 + STALKER4_LTR LTR Gypsy 123 402 0 7 594 330 25 0 0 chrUextra 1229549 1229576 -27775080 + STALKER4_I LTR Gypsy 1 27 -6503 7 594 289 96 0 37 chrUextra 1229576 1229630 -27775026 + Stalker2_I LTR Gypsy 1 52 -7350 7 594 5114 8 0 8 chrUextra 1229837 1230445 -27774211 + BS LINE Jockey 5 607 -4519 7 594 9750 14 17 1 chrUextra 1230545 1231721 -27772935 + DOC2_DM LINE Jockey 2593 3787 -1006 7 594 6978 91 30 21 chrUextra 1231822 1232957 -27771699 - HMSBEAGLE_I LTR Gypsy -4162 2367 1122 7 594 9857 8 18 1 chrUextra 1233097 1234273 -27770383 + DMRT1A LINE R1 2393 3588 -1595 7 594 2377 10 10 10 chrUextra 1234373 1234675 -27769981 - DM297_LTR LTR Gypsy -112 302 1 7 594 2801 11 0 3 chrUextra 1234675 1235027 -27769629 - DM297_I LTR Gypsy 0 6167 5817 7 594 4226 4 0 0 chrUextra 1235026 1235549 -27769107 - DM297_I LTR Gypsy -4618 1549 1027 7 594 10033 0 6 0 chrUextra 1235649 1236825 -27767831 + Gypsy5_I LTR Gypsy 72 1254 -5255 7 594 9513 21 8 6 chrUextra 1236925 1238100 -27766556 - R1_DM LINE R1 -1260 4096 2920 7 594 2980 0 0 0 chrUextra 1238200 1238551 -27766105 + HMSBEAGLE_I LTR Gypsy 6179 6529 0 7 594 2316 8 0 0 chrUextra 1238551 1238817 -27765839 + DMLTR5 LTR Gypsy 1 266 0 7 594 3838 8 0 62 chrUextra 1238821 1239322 -27765334 - MICROPIA_LTR LTR Gypsy 0 476 7 7 594 394 36 0 0 chrUextra 1239319 1239375 -27765281 + R1_DM LINE R1 652 707 -4649 7 594 3066 207 65 56 chrUextra 1239475 1240219 -27764437 - TAHRE LINE telomeric -2344 8119 7348 7 594 198 0 0 0 chrUextra 1240219 1240241 -27764415 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 7 594 3066 207 65 56 chrUextra 1240241 1240650 -27764006 - TAHRE LINE telomeric -3116 7347 6956 7 594 8026 76 7 4 chrUextra 1240755 1241925 -27762731 - HETA LINE telomeric -1058 5023 3851 7 594 4140 225 41 18 chrUextra 1242026 1243194 -27761462 - TOM_I LTR Gypsy -3070 3042 1848 7 594 4443 213 20 8 chrUextra 1243308 1244433 -27760223 - Stalker2_I LTR Gypsy -2642 4760 3622 7 594 4000 4 0 0 chrUextra 1244573 1245039 -27759617 - DOC LINE Jockey -2168 2557 2092 7 594 934 0 0 0 chrUextra 1245036 1245145 -27759511 - DOC LINE Jockey -1453 3272 3164 7 594 5151 2 2 0 chrUextra 1245143 1245747 -27758909 - DOC LINE Jockey -2642 2083 1479 7 594 9952 11 19 0 chrUextra 1245847 1247021 -27757635 - MICROPIA_I LTR Gypsy -1313 3163 1968 7 594 4319 4 0 0 chrUextra 1247121 1247659 -27756997 + DOC6_DM LINE Jockey 3685 4222 0 7 594 1082 210 62 92 chrUextra 1247655 1248218 -27756438 - Gypsy12A_LTR LTR Gypsy -1274 1006 501 7 594 812 304 137 0 chrUextra 1248584 1249009 -27755647 - OSVALDO_I LTR Gypsy -4172 2481 1999 7 594 4521 30 0 0 chrUextra 1249010 1249569 -27755087 - DMCR1A LINE CR1 -1792 2678 2120 7 594 5393 0 1 1 chrUextra 1249669 1250315 -27754341 - POGO DNA Pogo -41 2080 1435 7 594 4587 2 0 0 chrUextra 1250317 1250843 -27753813 - POGO DNA Pogo -1341 780 255 7 594 498 211 34 28 chrUextra 1250944 1251120 -27753536 + SAR_DM Satellite Satellite 613 789 -683 7 594 965 187 25 18 chrUextra 1251131 1251639 -27753017 + SAR_DM Satellite Satellite 1 511 -680 7 594 1072 164 29 8 chrUextra 1251650 1251896 -27752760 + SAR_DM Satellite Satellite 539 789 -683 7 594 915 165 33 19 chrUextra 1251907 1252117 -27752539 + SAR_DM Satellite Satellite 539 751 -721 7 594 4903 63 8 6 chrUextra 1252217 1252884 -27751772 + HMSBEAGLE_I LTR Gypsy 1503 2170 -4359 7 594 3562 59 98 0 chrUextra 1252879 1253390 -27751266 + HMSBEAGLE_I LTR Gypsy 2428 2988 -3541 7 594 3378 42 4 24 chrUextra 1253490 1253951 -27750705 - CIRCE LINE Composite -4017 2339 1888 7 594 386 347 29 34 chrUextra 1253656 1254035 -27750621 - Ulysses_I LTR Gypsy -1504 4877 4501 7 594 4165 44 17 53 chrUextra 1254027 1254627 -27750029 - CIRCE LINE Composite -4474 1882 1305 7 594 1732 312 3 3 chrUextra 1254792 1255425 -27749231 + Invader1_I LTR Gypsy 1463 2095 -1091 7 594 559 235 7 7 chrUextra 1255425 1255579 -27749077 + Invader1_I LTR Gypsy 2416 2569 -617 7 594 1824 34 4 0 chrUextra 1256035 1256272 -27748384 + TART_B1 LINE telomeric 3391 3628 -7026 7 594 2508 111 40 0 chrUextra 1256270 1256649 -27748007 + TART_B1 LINE telomeric 4415 4808 -5846 7 594 3285 114 64 0 chrUextra 1256648 1257207 -27747449 + TART LINE telomeric 768 1362 -13115 7 594 5167 98 89 90 chrUextra 1257309 1258479 -27746177 + BATUMI_I LTR Pao 562 1730 -6233 7 594 5007 2 5 8 chrUextra 1258579 1259171 -27745485 + DM1731_I LTR Copia 3377 3966 -10 7 594 2570 29 0 0 chrUextra 1259174 1259490 -27745166 + DM1731_LTR LTR Copia 21 336 0 7 594 1255 165 8 4 chrUextra 1259489 1259545 -27745111 + SAR_DM Satellite Satellite 399 594 -878 7 594 1274 79 0 0 chrUextra 1259545 1259734 -27744922 - ARS406_DM Unknown Unknown -164 189 1 7 594 1255 165 8 4 chrUextra 1259734 1259751 -27744905 + SAR_DM Satellite Satellite 595 661 -811 7 594 9796 14 16 1 chrUextra 1259851 1261023 -27743633 - Gypsy2_I LTR Gypsy -2774 3361 2172 7 594 9154 8 28 0 chrUextra 1261123 1262295 -27742361 - QUASIMODO_I LTR Gypsy -325 5735 4531 7 594 5280 18 1 5 chrUextra 1262395 1263052 -27741604 - PROTOP_A DNA P -450 655 1 7 594 2722 9 0 0 chrUextra 1263666 1263998 -27740658 + Copia2_I LTR Copia 3831 4162 0 7 594 1672 5 0 0 chrUextra 1263998 1264196 -27740460 + Copia2_LTR_DM LTR Copia 1 198 0 7 594 1032 24 0 0 chrUextra 1264196 1264319 -27740337 + (TTA)n Simple_repeat Simple_repeat 2 124 0 7 594 2411 94 21 12 chrUextra 1264937 1266080 -27738576 + DMSAT6 Satellite Satellite 1 1152 -29 7 594 426 308 41 0 chrUextra 1266231 1266426 -27738230 + Ulysses_I LTR Gypsy 5641 5843 -538 7 594 348 236 103 49 chrUextra 1266456 1266679 -27737977 + Ulysses_I LTR Gypsy 5894 6128 -253 7 594 360 63 0 0 chrUextra 1267556 1267619 -27737037 + ROO_I LTR Pao 780 842 -7414 7 594 1414 40 20 0 chrUextra 1267644 1267843 -27736813 + ROO_I LTR Pao 941 1143 -7113 7 594 1079 22 0 0 chrUextra 1267844 1267980 -27736676 + ROO_I LTR Pao 1897 2032 -6224 7 594 1750 295 29 19 chrUextra 1268020 1268643 -27736013 - NOMAD_I LTR Gypsy -2102 4470 3842 7 594 1543 154 13 10 chrUextra 1268750 1269059 -27735597 + SAR_DM Satellite Satellite 549 858 -614 7 594 2900 189 20 16 chrUextra 1269079 1269818 -27734838 + SAR_DM Satellite Satellite 1 742 -261 7 594 665 0 12 0 chrUextra 1269838 1269921 -27734735 - ARS406_DM Unknown Unknown -180 173 90 7 594 3412 20 0 0 chrUextra 1270021 1270430 -27734226 - NINJA_I LTR Pao -4136 1875 1467 7 594 5490 32 28 35 chrUextra 1270403 1271191 -27733465 - NINJA_I LTR Pao -5204 807 26 7 594 5291 13 3 2 chrUextra 1271291 1271923 -27732733 - BLASTOPIA_I LTR Gypsy -152 4329 3697 7 594 4858 0 0 0 chrUextra 1271890 1272461 -27732195 - BLASTOPIA_I LTR Gypsy -3457 1024 454 7 594 3984 166 4 7 chrUextra 1272562 1273306 -27731350 - Gypsy5_I LTR Gypsy -3083 3426 2685 7 594 3185 10 5 71 chrUextra 1273296 1273731 -27730925 + MICROPIA_LTR LTR Gypsy 20 425 -51 7 594 419 119 0 0 chrUextra 1273832 1273899 -27730757 + Gypsy8_LTR LTR Gypsy 1 67 -237 7 594 2095 19 0 8 chrUextra 1273996 1274255 -27730401 + CIRCE LINE Composite 3516 3772 -2584 7 594 5598 21 23 39 chrUextra 1274250 1275001 -27729655 + CIRCE LINE Composite 3952 4690 -1666 7 594 2772 273 9 2 chrUextra 1275117 1275929 -27728727 + HMSBEAGLE_I LTR Gypsy 3177 3993 -2536 7 594 349 363 21 12 chrUextra 1275930 1276256 -27728400 + HMSBEAGLE_I LTR Gypsy 4247 4575 -1954 7 594 224 185 31 0 chrUextra 1276875 1276940 -27727716 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 594 22 35 0 0 chrUextra 1277227 1277256 -27727400 + AT_rich Low_complexity Low_complexity 1 29 0 7 594 208 200 31 0 chrUextra 1277449 1277514 -27727142 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 594 3877 104 75 20 chrUextra 1277666 1278521 -27726135 + PROTOP_B DNA P 1 888 -217 7 594 313 50 0 0 chrUextra 1278514 1278574 -27726082 + PROTOP_B DNA P 572 631 -522 7 594 1719 44 13 4 chrUextra 1278579 1278808 -27725848 + PROTOP_B DNA P 794 1024 -129 7 594 9965 22 38 1 chrUextra 1278908 1280077 -27724579 - DMCR1A LINE CR1 -959 3511 2300 7 594 3265 41 0 15 chrUextra 1280177 1280571 -27724085 - DMCR1A LINE CR1 -2193 2277 1890 7 594 26 0 0 0 chrUextra 1280579 1280605 -27724051 + AT_rich Low_complexity Low_complexity 1 26 0 7 594 2420 69 0 0 chrUextra 1281445 1281764 -27722892 - IDEFIX_I LTR Gypsy -1481 4147 3829 7 594 1014 305 37 43 chrUextra 1282094 1282604 -27722052 + MICROPIA_I LTR Gypsy 1 507 -3969 7 594 4168 25 0 0 chrUextra 1282713 1283192 -27721464 + Copia2_I LTR Copia 3684 4162 0 7 594 233 29 0 0 chrUextra 1283192 1283224 -27721432 + Copia2_LTR_DM LTR Copia 1 32 -166 7 594 3368 20 60 0 chrUextra 1283224 1283623 -27721033 + Invader1_LTR LTR Gypsy 1 423 0 7 594 1572 0 0 0 chrUextra 1283623 1283793 -27720863 + Copia2_LTR_DM LTR Copia 29 198 0 7 594 1615 64 5 0 chrUextra 1283981 1284183 -27720473 - DMRT1A LINE R1 -144 5039 4837 7 594 3452 20 25 0 chrUextra 1284182 1284582 -27720074 + Transib5 DNA Transib 962 1371 -1630 7 594 4587 41 5 5 chrUextra 1284581 1285149 -27719507 + Transib5 DNA Transib 1684 2251 -750 7 594 4170 11 2 0 chrUextra 1285249 1285715 -27718941 - FW_DM LINE Jockey -1908 2784 2318 7 594 586 15 0 0 chrUextra 1285721 1285789 -27718867 + DIVER2_LTR LTR Pao 318 385 0 7 594 2839 47 140 3 chrUextra 1285789 1286175 -27718481 + DIVER2_I LTR Pao 1 439 -3708 7 594 417 122 68 10 chrUextra 1286530 1286645 -27718011 - Rehavkus-1_DY DNA Tc1 -5388 227 1 7 594 231 196 0 97 chrUextra 1286664 1286726 -27717930 - PROTOP DNA P -232 4248 4192 7 594 418 186 157 0 chrUextra 1286723 1286825 -27717831 - PROTOP DNA P -2895 1585 1468 7 594 272 262 0 48 chrUextra 1286816 1286900 -27717756 - PROTOP DNA P -3950 530 451 7 594 2277 55 30 10 chrUextra 1286939 1287235 -27717421 - PROTOP DNA P -4178 302 1 7 594 52 30 0 0 chrUextra 1287569 1287635 -27717021 + AT_rich Low_complexity Low_complexity 1 66 0 7 594 363 312 16 26 chrUextra 1287784 1287975 -27716681 - Gypsy7_I LTR Gypsy -3630 1354 1166 7 594 6100 44 40 63 chrUextra 1288071 1288950 -27715706 - PROTOP_A DNA P -1 1104 246 7 594 10336 6 52 1 chrUextra 1289050 1290217 -27714439 - Invader3_I LTR Gypsy -2491 2397 1171 7 594 5189 44 0 0 chrUextra 1290317 1290948 -27713708 - NINJA_I LTR Pao -3860 2151 1521 7 594 3896 36 37 44 chrUextra 1290937 1291483 -27713173 - NINJA_I LTR Pao -5396 615 74 7 594 8272 30 50 28 chrUextra 1291586 1292667 -27711989 + PROTOP_A DNA P 1 1105 0 7 594 8843 63 44 0 chrUextra 1292849 1294015 -27710641 + MDG1_I LTR Gypsy 4161 5377 -1219 7 594 8594 26 16 0 chrUextra 1294115 1295116 -27709540 + R1_DM LINE R1 4338 5354 -2 7 594 958 78 8 0 chrUextra 1295151 1295280 -27709376 + R1_DM LINE R1 1 130 -5226 7 594 293 188 62 0 chrUextra 1295592 1295656 -27709000 + Gypsy4_I LTR Gypsy 3517 3584 -2704 7 594 392 339 6 12 chrUextra 1295724 1295894 -27708762 + Gypsy4_I LTR Gypsy 4323 4491 -1797 7 594 1333 132 123 4 chrUextra 1296065 1296309 -27708347 - DNAREP1_DM LINE Penelope -321 273 1 7 594 271 275 10 73 chrUextra 1296380 1296476 -27708180 + Gypsy4_I LTR Gypsy 4926 5005 -1283 7 594 960 192 0 5 chrUextra 1296648 1296836 -27707820 - Gypsy2_I LTR Gypsy -862 5273 5087 7 594 276 320 20 20 chrUextra 1296988 1297090 -27707566 - G2_DM LINE Jockey -2720 382 281 7 594 715 13 0 0 chrUextra 1297910 1297989 -27706667 + DM297_I LTR Gypsy 6089 6167 0 7 594 3614 5 7 7 chrUextra 1297989 1298403 -27706253 + DM297_LTR LTR Gypsy 1 414 0 7 594 5596 25 24 5 chrUextra 1298403 1299075 -27705581 - PROTOP_A DNA P -401 704 20 7 594 3766 69 129 29 chrUextra 1299175 1299787 -27704869 - PROTOP_B DNA P -480 673 1 7 594 420 235 36 73 chrUextra 1299990 1300155 -27704501 - MDG3_I LTR Gypsy -1649 3337 3179 7 594 5911 130 137 22 chrUextra 1300447 1301604 -27703052 - TART LINE telomeric -4001 10476 9188 7 594 2622 100 22 21 chrUextra 1301704 1302868 -27701788 + DMSAT6 Satellite Satellite 1 1165 -18 7 594 3108 303 23 16 chrUextra 1302986 1304093 -27700563 + MICROPIA_I LTR Gypsy 2485 3598 -878 7 594 1852 111 16 60 chrUextra 1304440 1304756 -27699900 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 594 5633 14 0 0 chrUextra 1304756 1305395 -27699261 - STALKER4_I LTR Gypsy -3346 3184 2546 7 594 6514 55 58 9 chrUextra 1305495 1306358 -27698298 - R1_DM LINE R1 -4451 905 1 7 594 2383 11 0 0 chrUextra 1306391 1306653 -27698003 - R1_DM LINE R1 0 5356 5095 7 594 2201 270 2 4 chrUextra 1306758 1307312 -27697344 - Gypsy2_I LTR Gypsy -509 5626 5074 7 594 22 0 0 0 chrUextra 1307343 1307365 -27697291 + AT_rich Low_complexity Low_complexity 1 22 0 7 594 2640 239 4 4 chrUextra 1307366 1307921 -27696735 - Gypsy6_I LTR Gypsy -1714 5298 4744 7 594 4115 2 0 0 chrUextra 1308021 1308464 -27696192 + BS2 LINE Jockey 4279 4721 0 7 594 22 0 0 0 chrUextra 1308464 1308486 -27696170 + AT_rich Low_complexity Low_complexity 1 22 0 7 594 2580 35 3 25 chrUextra 1308603 1308924 -27695732 + NINJA_LTR LTR Pao 1 314 -3 7 594 268 289 22 11 chrUextra 1310037 1310128 -27694528 - Invader4_I LTR Gypsy -539 1874 1783 7 74 2639 35 0 0 chrUextra 1310547 1310864 -27693792 + NINJA_I LTR Pao 5695 6011 0 7 595 2545 41 3 28 chrUextra 1310864 1311188 -27693468 + NINJA_LTR LTR Pao 1 316 -1 7 595 21 0 0 0 chrUextra 1311240 1311261 -27693395 + AT_rich Low_complexity Low_complexity 1 21 0 7 595 5202 3 0 3 chrUextra 1311808 1312379 -27692277 - POGO DNA Pogo -1552 569 1 7 595 2469 191 43 12 chrUextra 1312380 1312964 -27691692 - SAR_DM Satellite Satellite -637 835 234 7 595 1377 53 83 21 chrUextra 1313070 1313262 -27691394 + SSU-rRNA_Dme rRNA rRNA 1670 1873 -122 7 595 1059 46 23 0 chrUextra 1313257 1313388 -27691268 + LSU-rRNA_Dme rRNA rRNA 978 1111 -2789 7 595 353 64 0 0 chrUextra 1313381 1313428 -27691228 + LSU-rRNA_Dme rRNA rRNA 1575 1621 -2279 7 595 2826 52 227 6 chrUextra 1313418 1313885 -27690771 + LSU-rRNA_Dme rRNA rRNA 2009 2578 -1322 7 595 2855 63 9 0 chrUextra 1313883 1314232 -27690424 + R2_DM LINE R2 1649 2000 -1607 7 595 2799 110 145 6 chrUextra 1314332 1314861 -27689795 - TART LINE telomeric -6799 7678 7159 7 595 1957 109 7 7 chrUextra 1314870 1315157 -27689499 - TART LINE telomeric -7457 7020 6734 7 595 617 222 35 22 chrUextra 1315210 1315493 -27689163 - TART LINE telomeric -7836 6641 6501 7 595 268 208 0 0 chrUextra 1315635 1315688 -27688968 + NOMAD_I LTR Gypsy 6520 6572 0 7 595 679 124 214 237 chrUextra 1316036 1316437 -27688219 - DNAREP1_DM LINE Penelope -201 393 2 7 595 268 208 0 0 chrUextra 1316922 1316975 -27687681 + NOMAD_I LTR Gypsy 6520 6572 0 7 595 1014 149 198 63 chrUextra 1317323 1317610 -27687046 - DNAREP1_DM LINE Penelope -201 393 83 7 595 523 33 0 0 chrUextra 1317699 1317760 -27686896 - DNAREP1_DM LINE Penelope -532 62 2 7 595 1297 132 3 172 chrUextra 1318411 1318713 -27685943 + HOBO DNA hAT 23 273 -2743 7 595 2030 97 216 21 chrUextra 1318718 1319091 -27685565 + PROTOP_B DNA P 33 478 -675 7 595 1546 72 10 0 chrUextra 1319068 1319276 -27685380 + HOBO DNA hAT 330 539 -2477 7 595 849 133 86 6 chrUextra 1320362 1320536 -27684120 - DNAREP1_DM LINE Penelope -297 297 110 7 595 8075 45 12 1 chrUextra 1320650 1321641 -27683015 + R1_DM LINE R1 616 1617 -3739 7 595 1266 7 0 0 chrUextra 1321653 1321796 -27682860 + R1_DM LINE R1 2001 2143 -3213 7 595 805 122 4 18 chrUextra 1321903 1322123 -27682533 - RSP Satellite Satellite 0 217 1 7 595 919 93 0 12 chrUextra 1322152 1322322 -27682334 - RSP Satellite Satellite -65 168 1 7 595 6023 44 0 1 chrUextra 1322349 1323056 -27681600 + G5_DM LINE Jockey 4 709 -4147 7 595 4663 31 0 23 chrUextra 1323156 1323716 -27680940 - CIRCE LINE Composite -3139 3217 2671 7 595 5015 29 3 8 chrUextra 1323724 1324316 -27680340 - CIRCE LINE Composite -3814 2542 1954 7 595 6673 34 57 39 chrUextra 1324416 1325283 -27679373 + DMCR1A LINE CR1 2169 3050 -1420 7 595 1277 135 31 6 chrUextra 1325297 1325569 -27679087 - DOC LINE Jockey -1559 3166 2846 7 595 8625 67 11 5 chrUextra 1325676 1326836 -27677820 - R1_DM LINE R1 -3236 2120 93 7 595 251 196 18 0 chrUextra 1326936 1327001 -27677655 - DM297_I LTR Gypsy -3741 2426 2372 7 595 769 39 0 0 chrUextra 1328196 1328300 -27676356 + DOC2_DM LINE Jockey 4689 4792 -1 7 595 760 99 0 0 chrUextra 1328977 1329078 -27675578 + Gypsy9_LTR LTR Gypsy 1 101 -235 7 595 1113 76 159 74 chrUextra 1329081 1329338 -27675318 + Gypsy9_I LTR Gypsy 75 353 -4324 7 595 4698 20 0 2 chrUextra 1329455 1329994 -27674662 + FW_DM LINE Jockey 4155 4692 0 7 595 3554 67 26 2 chrUextra 1329994 1330458 -27674198 - R1_DM LINE R1 -3947 1409 935 7 595 1385 46 0 0 chrUextra 1330440 1330614 -27674042 - R1_DM LINE R1 -4740 616 443 7 595 3493 161 23 32 chrUextra 1330714 1331873 -27672783 - TAHRE LINE telomeric -3748 10729 9854 7 595 5890 173 8 11 chrUextra 1333235 1334390 -27670266 + ROVER-I_DM LTR Gypsy 4082 5232 -1352 7 595 2328 35 0 0 chrUextra 1334490 1334776 -27669880 - PROTOP DNA P -4194 286 1 7 595 260 295 0 0 chrUextra 1334990 1335085 -27669571 + TOM_I LTR Gypsy 1685 1779 -4333 7 595 966 50 0 0 chrUextra 1335126 1335266 -27669390 - G4_DM LINE Jockey 0 3856 3717 7 595 1113 29 0 0 chrUextra 1335264 1335404 -27669252 - G4_DM LINE Jockey -267 3589 3450 7 595 237 298 9 37 chrUextra 1335424 1335640 -27669016 + DM297_I LTR Gypsy 1891 2100 -4067 7 595 683 30 10 0 chrUextra 1335748 1335848 -27668808 + STALKER4_I LTR Gypsy 6430 6530 0 7 595 3177 51 2 14 chrUextra 1335848 1336287 -27668369 + STALKER4_LTR LTR Gypsy 1 392 -10 7 595 2252 100 15 30 chrUextra 1336291 1336904 -27667752 - DMSAT6 Satellite Satellite -66 603 1 7 595 2112 45 3 6 chrUextra 1337006 1337296 -27667360 + Gypsy6A_LTR LTR Gypsy 36 408 -12 7 595 6256 28 23 55 chrUextra 1337296 1338164 -27666492 + Gypsy12_LTR LTR Gypsy 1 840 -1496 7 595 764 134 0 0 chrUextra 1338264 1338383 -27666273 - DMRT1B LINE R1 -5064 119 1 7 595 854 91 314 8 chrUextra 1338585 1338830 -27665826 - DMCR1A LINE CR1 -4065 405 86 7 595 235 295 84 33 chrUextra 1339170 1339384 -27665272 - Invader2_I LTR Gypsy -2256 2336 2112 7 595 248 135 0 55 chrUextra 1339521 1339576 -27665080 + MDG1_I LTR Gypsy 5674 5725 -871 7 595 1577 91 15 11 chrUextra 1339580 1339956 -27664700 + MDG1_I LTR Gypsy 5956 6531 -65 7 595 336 30 0 132 chrUextra 1339990 1340066 -27664590 + MDG1_I LTR Gypsy 6531 6596 0 7 595 1587 20 0 0 chrUextra 1340082 1340383 -27664273 + (TAA)n Simple_repeat Simple_repeat 1 301 0 7 595 1231 148 102 18 chrUextra 1340383 1340666 -27663990 + MDG1_LTR LTR Gypsy 42 348 -94 7 595 1770 217 13 67 chrUextra 1340778 1341316 -27663340 + Gypsy12_LTR LTR Gypsy 115 623 -1713 7 595 501 162 97 67 chrUextra 1341317 1341482 -27663174 + Gypsy12_LTR LTR Gypsy 1000 1169 -1167 7 595 2704 31 87 0 chrUextra 1341501 1341857 -27662799 - CIRCE LINE Composite -5969 387 1 7 595 515 77 13 0 chrUextra 1341857 1341935 -27662721 - CIRCE LINE Composite 0 6356 6278 7 595 481 66 0 13 chrUextra 1342035 1342112 -27662544 + S_DM DNA Tc1 1661 1736 0 7 595 1034 15 0 8 chrUextra 1342112 1342239 -27662417 - CIRCE LINE Composite -1861 4495 4370 7 595 1588 120 67 36 chrUextra 1342239 1342595 -27662061 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 595 1904 134 56 12 chrUextra 1342595 1343009 -27661647 - ROVER-I_DM LTR Gypsy 0 6584 6153 7 595 5589 0 1 1 chrUextra 1343292 1343962 -27660694 - POGO DNA Pogo -30 2091 1422 7 595 4234 0 0 0 chrUextra 1343960 1344449 -27660207 - POGO DNA Pogo -1330 791 303 7 595 1587 9 0 0 chrUextra 1344562 1344776 -27659880 + (TTA)n Simple_repeat Simple_repeat 1 214 0 7 595 6439 62 35 0 chrUextra 1344778 1345656 -27659000 - IVK_DM LINE I -1237 4165 3257 7 595 346 60 0 0 chrUextra 1345656 1345706 -27658950 - IVK_DM LINE I -2316 3086 3037 7 595 1776 35 0 4 chrUextra 1345806 1346033 -27658623 + Gypsy6A_LTR LTR Gypsy 195 420 0 7 595 6436 48 25 44 chrUextra 1346033 1346963 -27657693 + Gypsy3_I LTR Gypsy 1 912 -5265 7 595 1655 198 28 84 chrUextra 1347063 1347636 -27657020 + TART_B1 LINE telomeric 1136 1676 -8978 7 595 764 83 0 0 chrUextra 1347644 1347764 -27656892 + TART_B1 LINE telomeric 2286 2405 -8249 7 595 227 32 0 0 chrUextra 1347764 1347795 -27656861 + PROTOP_A DNA P 1 31 -1074 7 595 3044 19 0 38 chrUextra 1347793 1348186 -27656470 + PROTOP_A DNA P 728 1105 0 7 595 259 59 0 0 chrUextra 1348186 1348220 -27656436 + TART_B1 LINE telomeric 2399 2432 -8222 7 595 1911 48 0 4 chrUextra 1348323 1348572 -27656084 + Gypsy6A_LTR LTR Gypsy 173 420 0 7 595 5855 41 18 81 chrUextra 1348572 1349477 -27655179 + Gypsy6_I LTR Gypsy 1 848 -6164 7 595 1017 53 0 0 chrUextra 1349577 1349709 -27654947 - DMCR1A LINE CR1 -715 3755 3624 7 595 7743 28 88 0 chrUextra 1349706 1350734 -27653922 - DMCR1A LINE CR1 -1012 3458 2340 7 595 3198 13 3 0 chrUextra 1350834 1351212 -27653444 - Gypsy4_I LTR Gypsy -1960 4328 3950 7 595 6419 7 25 0 chrUextra 1351225 1351990 -27652666 - Gypsy4_I LTR Gypsy -2392 3896 3113 7 595 875 296 186 11 chrUextra 1352258 1353213 -27651443 + TV1I LTR Gypsy 379 1501 -4559 7 595 247 233 12 0 chrUextra 1353673 1353755 -27650901 + DM297_I LTR Gypsy 2372 2443 -3724 7 595 503 330 78 43 chrUextra 1353767 1353845 -27650811 + Gypsy4_I LTR Gypsy 2521 2633 -3655 7 595 1425 42 19 0 chrUextra 1353845 1354059 -27650597 + TLD2 Unknown Unknown 1 218 0 7 595 503 330 78 43 chrUextra 1354059 1354502 -27650154 + Gypsy4_I LTR Gypsy 2634 3280 -3008 7 595 397 176 11 42 chrUextra 1354665 1354760 -27649896 + TIRANT_I LTR Gypsy 1 92 -7600 7 595 2059 198 68 45 chrUextra 1354809 1355723 -27648933 + TIRANT_I LTR Gypsy 237 1037 -6655 7 595 1006 53 15 0 chrUextra 1355858 1355991 -27648665 - R1_DM LINE R1 -357 4999 4865 7 595 21 0 0 0 chrUextra 1356337 1356358 -27648298 + AT_rich Low_complexity Low_complexity 1 21 0 7 595 3707 30 93 0 chrUextra 1357114 1357771 -27646885 - R1_DM LINE R1 -252 5104 4387 7 595 4017 40 2 0 chrUextra 1357768 1358270 -27646386 - R1_DM LINE R1 -2010 3346 2844 7 595 7415 101 13 8 chrUextra 1358370 1359525 -27645131 + S_DM DNA Tc1 425 1585 -151 7 595 5333 21 44 1 chrUextra 1359625 1360290 -27644366 - R1_DM LINE R1 -617 4739 4047 7 595 3908 22 57 0 chrUextra 1360284 1360780 -27643876 - R1_DM LINE R1 -851 4505 3982 7 595 8691 39 15 8 chrUextra 1360881 1362035 -27642621 - ROO_I LTR Pao -6076 2180 1019 7 595 4488 24 5 0 chrUextra 1362137 1362689 -27641967 - PROTOP_A DNA P -550 555 1 7 595 4000 91 7 2 chrUextra 1362689 1363290 -27641366 - TART LINE telomeric -13226 1251 648 7 595 2504 61 19 96 chrUextra 1363391 1363920 -27640736 + BATUMI_I LTR Pao 279 766 -7197 7 595 3252 86 2 0 chrUextra 1363903 1364381 -27640275 - I_DM LINE I -2320 3911 3433 7 595 1128 58 0 0 chrUextra 1364390 1364545 -27640111 - I_DM LINE I -2995 3236 3082 7 595 4250 10 2 0 chrUextra 1364645 1365148 -27639508 - DOC2_DM LINE Jockey -2438 2355 1852 7 595 4674 14 139 0 chrUextra 1365146 1365800 -27638856 - DOC2_DM LINE Jockey -870 3923 3179 7 595 9211 33 26 0 chrUextra 1365900 1367055 -27637601 + R1_DM LINE R1 2122 3306 -2050 7 595 228 143 0 0 chrUextra 1367199 1367241 -27637415 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 595 189 0 0 0 chrUextra 1367667 1367688 -27636968 + (T)n Simple_repeat Simple_repeat 1 21 0 7 595 21 0 0 0 chrUextra 1368151 1368172 -27636484 + AT_rich Low_complexity Low_complexity 1 21 0 7 595 1389 32 5 11 chrUextra 1368410 1368601 -27636055 - IDEFIX_I LTR Gypsy -3249 2379 2190 7 595 1758 53 20 0 chrUextra 1368618 1368863 -27635793 - IDEFIX_I LTR Gypsy -4764 864 615 7 595 3966 37 0 0 chrUextra 1368873 1369386 -27635270 - IDEFIX_I LTR Gypsy -5115 513 1 7 595 4286 16 0 8 chrUextra 1369664 1370180 -27634476 - FW_DM LINE Jockey -581 4111 3600 7 595 5201 25 0 0 chrUextra 1370188 1370818 -27633838 - FW_DM LINE Jockey -3764 928 299 7 595 368 21 0 0 chrUextra 1370918 1370966 -27633690 + PROTOP DNA P 527 574 -3906 7 595 4654 14 28 0 chrUextra 1370963 1371536 -27633120 + PROTOP DNA P 3892 4480 0 7 595 821 109 0 8 chrUextra 1371536 1371665 -27632991 - TART LINE telomeric -7545 6932 6805 7 595 1577 125 3 52 chrUextra 1371675 1371963 -27632693 - TART LINE telomeric -10520 3957 3684 7 595 288 169 0 0 chrUextra 1371963 1372028 -27632628 - TART LINE telomeric -11118 3359 3295 7 595 5209 7 0 3 chrUextra 1372172 1372782 -27631874 - DOC LINE Jockey -4115 610 3 7 595 3416 83 9 23 chrUextra 1372791 1373318 -27631338 + Gypsy12_I LTR Gypsy 9 528 -5018 7 595 3279 20 10 0 chrUextra 1373426 1373830 -27630826 + TAHRE LINE telomeric 459 866 -9597 7 595 2441 38 50 0 chrUextra 1373831 1374051 -27630605 - DM1731_LTR LTR Copia 0 336 117 7 595 297 0 0 0 chrUextra 1374051 1374084 -27630572 + (CATA)n Simple_repeat Simple_repeat 2 34 0 7 595 2441 38 50 0 chrUextra 1374084 1374183 -27630473 - DM1731_LTR LTR Copia -220 116 2 7 595 3280 2 8 13 chrUextra 1374183 1374580 -27630076 - DM1731_I LTR Copia 0 3976 3582 7 595 4440 133 52 43 chrUextra 1374680 1375833 -27628823 - TART_B1 LINE telomeric -7956 2698 1109 7 595 9661 9 32 1 chrUextra 1375933 1377086 -27627570 - Invader1_I LTR Gypsy -147 3039 1851 7 595 1757 5 0 0 chrUextra 1377186 1377388 -27627268 + DMRT1B LINE R1 4982 5183 0 7 595 1380 112 54 0 chrUextra 1377423 1377664 -27626992 + TART_B1 LINE telomeric 2309 2562 -8092 7 595 1662 41 0 0 chrUextra 1377665 1377885 -27626771 + TART_B1 LINE telomeric 3433 3652 -7002 7 595 2803 106 39 26 chrUextra 1377882 1378339 -27626317 + TART_B1 LINE telomeric 4297 4759 -5895 7 595 3369 200 36 26 chrUextra 1378441 1379592 -27625064 + SAR_DM Satellite Satellite 1 1162 -208 7 595 4837 0 2 0 chrUextra 1379692 1380259 -27624397 + FW_DM LINE Jockey 4125 4692 0 7 595 392 103 0 0 chrUextra 1380476 1380534 -27624122 + FB4_DM DNA Tc1 1018 1075 -3014 7 595 865 128 5 11 chrUextra 1380561 1380750 -27623906 - S_DM DNA Tc1 0 1736 1549 7 595 9181 5 64 1 chrUextra 1380947 1382096 -27622560 - DM176_I LTR Gypsy -1492 4928 3707 7 595 9675 24 0 0 chrUextra 1383448 1384599 -27620057 - R2_DM LINE R2 -1002 2605 1455 7 595 9264 18 0 3 chrUextra 1384700 1385852 -27618804 + QUASIMODO_I LTR Gypsy 2582 3729 -2331 7 595 1031 16 0 0 chrUextra 1385952 1386078 -27618578 + DM176_LTR LTR Gypsy 382 507 0 7 595 704 268 0 0 chrUextra 1386161 1386366 -27618290 - Copia2_I LTR Copia -97 4065 3861 7 595 2600 16 0 3 chrUextra 1386370 1386685 -27617971 - DM176_I LTR Gypsy -1841 4579 4266 7 595 3504 7 9 0 chrUextra 1386676 1387104 -27617552 - DM176_I LTR Gypsy -2804 3616 3185 7 595 9387 24 3 2 chrUextra 1387204 1388355 -27616301 + G2_DM LINE Jockey 1703 2855 -247 7 595 1206 8 0 0 chrUextra 1388455 1388585 -27616071 + STALKER4_LTR LTR Gypsy 128 257 -145 7 595 1397 58 5 50 chrUextra 1388585 1388785 -27615871 - ROVER-LTR_DM LTR Gypsy 0 367 177 7 595 519 68 0 39 chrUextra 1388916 1388993 -27615663 - ROVER-LTR_DM LTR Gypsy -293 74 1 7 595 5236 5 5 0 chrUextra 1388992 1389606 -27615050 - ROVER-I_DM LTR Gypsy 0 6584 5968 7 595 275 176 58 14 chrUextra 1389770 1389839 -27614817 - DM176_LTR LTR Gypsy -141 366 295 7 595 237 228 11 151 chrUextra 1389948 1390041 -27614615 - DM176_LTR LTR Gypsy -238 269 190 7 595 865 126 0 71 chrUextra 1390097 1390251 -27614405 - DM176_I LTR Gypsy 0 6420 6278 7 595 749 156 2 28 chrUextra 1390259 1390410 -27614246 - DM176_I LTR Gypsy -561 5859 5731 7 595 1725 212 11 13 chrUextra 1390394 1390857 -27613799 - DM297_I LTR Gypsy -1433 4734 4273 7 595 257 32 0 0 chrUextra 1391130 1391161 -27613495 - CIRCE LINE Composite -1376 4980 4950 7 595 2888 24 0 0 chrUextra 1391161 1391495 -27613161 + R1_DM LINE R1 2864 3197 -2159 7 595 2974 20 3 0 chrUextra 1391496 1391840 -27612816 + R1_DM LINE R1 3938 4282 -1074 7 595 2123 32 4 0 chrUextra 1391860 1392106 -27612550 + R1_DM LINE R1 4407 4653 -703 7 595 2071 149 9 0 chrUextra 1392211 1392547 -27612109 - DMCR1A LINE CR1 -850 3620 3282 7 595 1173 87 6 12 chrUextra 1392562 1392723 -27611933 - DMCR1A LINE CR1 -1239 3231 3072 7 595 875 145 13 28 chrUextra 1392723 1393016 -27611640 + DNAREP1_DM LINE Penelope 2 332 -262 7 595 597 167 86 16 chrUextra 1393228 1393356 -27611300 - DNAREP1_DM LINE Penelope -26 568 432 7 595 8264 72 89 1 chrUextra 1393460 1394609 -27610047 - TART LINE telomeric -12618 1859 610 7 595 9529 20 13 5 chrUextra 1394709 1395815 -27608841 + R1_DM LINE R1 4243 5356 0 7 595 5918 15 41 1 chrUextra 1395959 1397109 -27607547 + R1_DM LINE R1 3539 4734 -622 7 595 1019 0 0 0 chrUextra 1397209 1397318 -27607338 - ROO_I LTR Pao -8147 109 1 7 595 3999 2 0 0 chrUextra 1397318 1397746 -27606910 - ROO_LTR LTR Pao 0 428 1 7 595 1099 336 20 8 chrUextra 1397835 1398327 -27606329 - Gypsy3_I LTR Gypsy -4648 1529 1032 7 595 2648 0 7 0 chrUextra 1399709 1400003 -27604653 - Copia_I LTR Copia -4297 296 1 7 595 2468 0 0 0 chrUextra 1400003 1400279 -27604377 - Copia_LTR LTR Copia 0 276 1 7 595 665 267 42 33 chrUextra 1400528 1400859 -27603797 - Gypsy11_I LTR Gypsy -137 3387 3098 7 595 4387 113 59 128 chrUextra 1400962 1402106 -27602550 + BATUMI_I LTR Pao 98 1161 -6802 7 595 5670 19 0 0 chrUextra 1402208 1402844 -27601812 + R1_DM LINE R1 4056 4691 -665 7 595 1601 68 0 5 chrUextra 1402834 1403040 -27601616 + R1_DM LINE R1 5034 5238 -118 7 595 1381 62 0 17 chrUextra 1403023 1403204 -27601452 + R1_DM LINE R1 224 401 -4955 7 595 1107 64 0 7 chrUextra 1403215 1403357 -27601299 + R1_DM LINE R1 721 861 -4495 7 595 9006 51 24 3 chrUextra 1404706 1405855 -27598801 - TART LINE telomeric -4046 10431 9259 7 595 314 28 0 0 chrUextra 1405955 1405991 -27598665 - ROVER-I_DM LTR Gypsy -6446 138 103 7 595 1120 16 0 0 chrUextra 1406042 1406165 -27598491 - ROVER-I_DM LTR Gypsy -6461 123 1 7 595 3050 3 39 25 chrUextra 1406165 1406527 -27598129 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 595 3139 192 0 0 chrUextra 1406527 1407104 -27597552 - ROVER-I_DM LTR Gypsy -2719 3865 3289 7 595 9900 25 15 0 chrUextra 1407204 1408353 -27596303 - NINJA_I LTR Pao -2179 3832 2667 7 595 642 182 112 112 chrUextra 1408453 1408718 -27595938 + Gypsy12_LTR LTR Gypsy 1323 1597 -683 7 595 207 0 0 0 chrUextra 1408718 1408741 -27595915 + (TAA)n Simple_repeat Simple_repeat 3 25 0 7 595 497 206 144 65 chrUextra 1408741 1408827 -27595829 + Gypsy12_LTR LTR Gypsy 1598 1678 -602 7 595 6093 53 47 1 chrUextra 1408820 1409600 -27595056 - IVK_DM LINE I -2 5400 4585 7 595 30 27 0 0 chrUextra 1409819 1409856 -27594800 + AT_rich Low_complexity Low_complexity 1 37 0 7 595 27 0 0 0 chrUextra 1410277 1410304 -27594352 + AT_rich Low_complexity Low_complexity 1 27 0 7 595 488 209 27 143 chrUextra 1410306 1410607 -27594049 + TOM_I LTR Gypsy 1 266 -5846 7 595 9737 23 0 12 chrUextra 1410949 1412097 -27592559 - TAHRE LINE telomeric -5444 5019 3886 7 595 1219 184 37 0 chrUextra 1412197 1412441 -27592215 + ROVER-I_DM LTR Gypsy 5056 5308 -1276 7 595 2801 175 80 18 chrUextra 1412443 1413096 -27591560 + ROVER-I_DM LTR Gypsy 5892 6584 0 7 595 1460 80 98 4 chrUextra 1413095 1413320 -27591336 + ROVER-LTR_DM LTR Gypsy 1 246 -121 7 595 9792 36 27 0 chrUextra 1413444 1414591 -27590065 + DIVER_I LTR Pao 234 1411 -4232 7 595 4441 43 9 0 chrUextra 1414691 1415228 -27589428 - TART LINE telomeric -11876 2601 2060 7 595 4323 69 125 0 chrUextra 1415232 1415838 -27588818 - TART LINE telomeric -12625 1852 1171 7 595 482 18 0 0 chrUextra 1415938 1415995 -27588661 + STALKER4_I LTR Gypsy 6474 6530 0 7 595 3430 48 1 14 chrUextra 1415995 1416434 -27588222 + STALKER4_LTR LTR Gypsy 1 399 -3 7 595 4815 25 132 0 chrUextra 1416434 1417085 -27587571 - R1_DM LINE R1 -1700 3656 2920 7 595 8621 59 13 11 chrUextra 1417185 1418330 -27586326 + IDEFIX_I LTR Gypsy 3751 4897 -731 7 595 262 0 0 0 chrUextra 1418463 1418494 -27586162 + Gypsy12A_LTR LTR Gypsy 2249 2279 -1 7 595 417 200 11 0 chrUextra 1418873 1418963 -27585693 + DNAREP1_DM LINE Penelope 24 114 -480 7 595 1194 33 118 0 chrUextra 1418950 1419102 -27585554 + Baggins1 LINE LOA 3482 3651 -1802 7 595 3322 44 114 9 chrUextra 1419114 1419554 -27585102 + Baggins1 LINE LOA 3705 4190 -1263 7 595 2501 96 42 14 chrUextra 1419678 1420036 -27584620 - HMSBEAGLE_I LTR Gypsy -5040 1489 1122 7 595 1048 118 47 5 chrUextra 1420134 1420346 -27584310 - HMSBEAGLE_I LTR Gypsy -5819 710 490 7 595 237 235 0 14 chrUextra 1420456 1420525 -27584131 - TIRANT_LTR LTR Gypsy -109 308 241 7 595 266 105 0 0 chrUextra 1420523 1420561 -27584095 - HMSBEAGLE_I LTR Gypsy -132 6397 6360 7 595 1481 131 83 0 chrUextra 1420924 1421176 -27583480 + MAX_LTR LTR Pao 49 321 0 7 595 2377 40 3 60 chrUextra 1421176 1421493 -27583163 + MAX_I LTR Pao 1 299 -7615 7 595 292 337 112 8 chrUextra 1421794 1422045 -27582611 - BLASTOPIA_I LTR Gypsy -1 4480 4204 7 595 1146 165 33 8 chrUextra 1422170 1422414 -27582242 + SAR_DM Satellite Satellite 540 789 -683 7 595 1243 172 20 8 chrUextra 1422425 1423316 -27581340 + SAR_DM Satellite Satellite 1 901 -683 7 595 5065 18 0 0 chrUextra 1423416 1423987 -27580669 - FW_DM LINE Jockey -1049 3643 3073 7 595 4639 28 4 0 chrUextra 1424020 1424562 -27580094 - DOC2_DM LINE Jockey -2467 2326 1783 7 595 1768 43 103 4 chrUextra 1424662 1424894 -27579762 - G4_DM LINE Jockey -273 3583 3329 7 595 401 74 56 0 chrUextra 1424888 1424942 -27579714 - G4_DM LINE Jockey -683 3173 3117 7 595 4898 39 32 10 chrUextra 1424924 1425539 -27579117 - G4_DM LINE Jockey -903 2953 2325 7 595 654 47 12 0 chrUextra 1425537 1425623 -27579033 - G4_DM LINE Jockey -1876 1980 1894 7 595 1560 0 51 0 chrUextra 1425632 1425808 -27578848 - G4_DM LINE Jockey -2195 1661 1477 7 595 353 363 34 28 chrUextra 1425936 1426290 -27578366 - BURDOCK_I LTR Gypsy -4878 982 627 7 595 9824 28 8 0 chrUextra 1427154 1428300 -27576356 - R1_DM LINE R1 -1824 3532 2378 7 595 7902 14 46 28 chrUextra 1428483 1429436 -27575220 - CIRCE LINE Composite -5386 970 1 7 595 900 46 0 0 chrUextra 1429436 1429545 -27575111 - CIRCE LINE Composite 0 6356 6248 7 595 2583 0 3 0 chrUextra 1429646 1429928 -27574728 + Copia_I LTR Copia 4311 4593 0 7 595 2468 0 0 0 chrUextra 1429928 1430204 -27574452 + Copia_LTR LTR Copia 1 276 0 7 595 338 152 22 122 chrUextra 1430204 1430237 -27574419 + SSU-rRNA_Dme rRNA rRNA 1972 1995 0 7 595 5299 19 61 1 chrUextra 1430891 1431876 -27572780 + R2_DM LINE R2 2231 3274 -333 7 595 1243 35 0 0 chrUextra 1431893 1432036 -27572620 + LSU-rRNA_Dme rRNA rRNA 2579 2721 -1179 7 595 4433 37 30 3 chrUextra 1432136 1432692 -27571964 + IDEFIX_I LTR Gypsy 4466 5036 -592 7 595 2937 58 0 0 chrUextra 1432692 1433053 -27571603 + BEL_LTR LTR Pao 1 361 0 7 595 1848 49 0 9 chrUextra 1433053 1433281 -27571375 + BEL_I LTR Pao 1 226 -5178 7 595 663 215 0 0 chrUextra 1433382 1433517 -27571139 - Gypsy2_I LTR Gypsy -914 5221 5087 7 595 276 301 30 30 chrUextra 1433632 1433771 -27570885 - G2_DM LINE Jockey -2720 382 281 7 595 2614 3 0 0 chrUextra 1434625 1434908 -27569748 - MAX_I LTR Pao -7631 283 1 7 595 2932 6 0 0 chrUextra 1434908 1435229 -27569427 - MAX_LTR LTR Pao 0 321 1 7 595 5015 2 2 0 chrUextra 1435229 1435769 -27568887 - BARI_DM DNA Tc1 -372 1356 816 7 595 2281 8 16 0 chrUextra 1435869 1436125 -27568531 - MAX_I LTR Pao -7654 260 1 7 595 2932 6 0 0 chrUextra 1436125 1436446 -27568210 - MAX_LTR LTR Pao 0 321 1 7 595 1718 294 12 21 chrUextra 1436450 1437013 -27567643 + MICROPIA_I LTR Gypsy 2768 3325 -1151 7 595 1101 289 4 4 chrUextra 1437907 1438249 -27566407 + Gypsy9_I LTR Gypsy 882 1543 -5469 7 595 528 59 0 29 chrUextra 1438359 1438429 -27566227 + ACCORD2_LTR LTR Gypsy 148 215 0 7 595 1641 123 16 4 chrUextra 1438429 1438671 -27565985 + HETA LINE telomeric 2433 2677 -3404 7 595 4099 168 16 42 chrUextra 1438667 1439498 -27565158 + HETA LINE telomeric 2959 3767 -2314 7 595 1462 103 216 10 chrUextra 1439599 1439891 -27564765 - DMRT1C LINE R1 -3169 2274 1923 7 595 236 161 0 16 chrUextra 1440407 1440470 -27564186 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 7 595 2806 59 2 2 chrUextra 1440841 1441389 -27563267 - R1_DM LINE R1 -3620 1736 1081 7 595 2353 55 0 7 chrUextra 1441383 1441677 -27562979 - R1_DM LINE R1 -3748 1608 1317 7 74 2693 26 0 0 chrUextra 1441675 1441983 -27562673 - R1_DM LINE R1 -3528 1828 1521 7 596 960 108 7 19 chrUextra 1442087 1443029 -27561627 + RSP Satellite Satellite 1 931 0 7 596 1422 27 0 42 chrUextra 1443033 1443225 -27561431 - G5_DM LINE Jockey 0 4856 4673 7 596 4561 14 16 0 chrUextra 1443327 1443843 -27560813 - DOC LINE Jockey -4198 527 4 7 596 2721 73 13 2 chrUextra 1443849 1444409 -27560247 - G5_DM LINE Jockey -146 4710 3972 7 596 7736 93 51 0 chrUextra 1444567 1445709 -27558947 - TART_B1 LINE telomeric -7427 3227 2028 7 596 29 28 0 0 chrUextra 1446762 1446798 -27557858 + AT_rich Low_complexity Low_complexity 1 36 0 7 596 760 0 0 0 chrUextra 1447050 1447132 -27557524 - ROO_LTR LTR Pao -346 82 1 7 596 3832 110 0 7 chrUextra 1447132 1447733 -27556923 + IDEFIX_I LTR Gypsy 5032 5628 0 7 596 3697 46 2 2 chrUextra 1447733 1448191 -27556465 + IDEFIX_LTR LTR Gypsy 1 458 -136 7 596 234 239 0 0 chrUextra 1448554 1448600 -27556056 + Gypsy4_I LTR Gypsy 3452 3497 -2791 7 596 534 272 58 45 chrUextra 1448611 1448834 -27555822 + Gypsy4_I LTR Gypsy 3458 3683 -2605 7 596 22 0 0 0 chrUextra 1448940 1448962 -27555694 + AT_rich Low_complexity Low_complexity 1 22 0 7 596 527 299 9 20 chrUextra 1449193 1449427 -27555229 + Gypsy9_I LTR Gypsy 868 1051 -3626 7 596 4021 2 7 0 chrUextra 1449532 1449976 -27554680 - BARI_DM DNA Tc1 -1278 450 4 7 596 6100 0 1 27 chrUextra 1449976 1450673 -27553983 - BARI_DM DNA Tc1 -1 1727 1049 7 596 8444 35 13 23 chrUextra 1450868 1451914 -27552742 + CIRCE LINE Composite 4981 6016 -340 7 596 1574 57 0 0 chrUextra 1452014 1452206 -27552450 - PROTOP DNA P -4215 265 74 7 596 258 32 0 0 chrUextra 1452406 1452437 -27552219 + (CAA)n Simple_repeat Simple_repeat 2 32 0 7 596 4756 2 4 0 chrUextra 1453255 1453777 -27550879 + FW_DM LINE Jockey 4169 4692 0 7 596 4762 20 2 0 chrUextra 1453783 1454326 -27550330 + R1_DM LINE R1 4729 5272 -84 7 596 607 28 0 0 chrUextra 1454325 1454396 -27550260 + R1_DM LINE R1 229 299 -5057 7 596 600 122 41 50 chrUextra 1454668 1454789 -27549867 - NTS_DM Other Other -120 120 1 7 596 1610 28 19 19 chrUextra 1454789 1455004 -27549652 - NTS_DM Other Other 0 240 26 7 596 268 196 0 19 chrUextra 1455081 1455133 -27549523 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 596 3916 0 23 2 chrUextra 1455194 1455636 -27549020 + G_DM LINE Jockey 1 451 -3895 7 596 5442 53 49 0 chrUextra 1455738 1456416 -27548240 - DIVER_I LTR Pao -4932 711 1 7 596 1115 108 9 110 chrUextra 1456437 1456665 -27547991 - DIVER_LTR LTR Pao 0 224 20 7 596 1864 9 0 0 chrUextra 1456664 1456876 -27547780 + STALKER4_I LTR Gypsy 2725 2936 -3594 7 596 1616 66 43 22 chrUextra 1456976 1457207 -27547449 + PROTOP_B DNA P 918 1153 0 7 596 1474 130 133 208 chrUextra 1457401 1457906 -27546750 + DNAREP1_DM LINE Penelope 123 589 -5 7 596 2028 34 0 15 chrUextra 1458216 1458484 -27546172 + Invader2_I LTR Gypsy 4329 4592 0 7 596 1837 77 25 55 chrUextra 1458484 1458758 -27545898 + Invader2_LTR LTR Gypsy 1 266 0 7 596 777 108 0 129 chrUextra 1458791 1458961 -27545695 + HMSBEAGLE_I LTR Gypsy 6219 6366 -163 7 596 266 105 0 0 chrUextra 1459170 1459208 -27545448 + HMSBEAGLE_I LTR Gypsy 6360 6397 -132 7 596 245 243 0 14 chrUextra 1459206 1459277 -27545379 + TIRANT_LTR LTR Gypsy 241 310 -107 7 596 1767 167 19 92 chrUextra 1459464 1459887 -27544769 + Gypsy3_LTR LTR Gypsy 1 392 -6 7 596 235 111 0 62 chrUextra 1459909 1459957 -27544699 + Gypsy3_LTR LTR Gypsy 354 398 0 7 596 2268 32 4 7 chrUextra 1459957 1460237 -27544419 - CIRCE LINE Composite -1097 5259 4981 7 596 2581 105 12 29 chrUextra 1460700 1461834 -27542822 + DMSAT6 Satellite Satellite 1 1114 -3 7 596 5387 118 28 3 chrUextra 1461936 1463073 -27541583 + Gypsy2_I LTR Gypsy 2034 3939 -3073 7 596 5373 2 2 0 chrUextra 1463173 1463764 -27540892 - FW_DM LINE Jockey -1805 2887 2296 7 596 4765 24 0 0 chrUextra 1463772 1464312 -27540344 - R1_DM LINE R1 -616 4740 4201 7 596 1539 17 6 0 chrUextra 1464412 1464590 -27540066 + FW_DM LINE Jockey 3655 3833 -859 7 596 4344 28 41 2 chrUextra 1464594 1465128 -27539528 + FW_DM LINE Jockey 4138 4692 0 7 596 243 59 0 0 chrUextra 1465138 1465172 -27539484 - R1_DM LINE R1 -3966 1390 1357 7 596 3086 34 13 3 chrUextra 1465172 1465551 -27539105 - R1_DM LINE R1 -4150 1206 824 7 596 359 258 99 103 chrUextra 1465653 1465916 -27538740 + Invader1_LTR LTR Gypsy 107 368 -55 7 596 271 128 0 21 chrUextra 1466436 1466484 -27538172 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 596 376 49 65 16 chrUextra 1466506 1466568 -27538088 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 596 953 183 102 15 chrUextra 1466567 1466772 -27537884 - DMLTR5 LTR Gypsy 0 266 44 7 596 4753 32 0 4 chrUextra 1466891 1467450 -27537206 + HETA LINE telomeric 5524 6080 -1 7 596 276 29 0 0 chrUextra 1467450 1467484 -27537172 + TAHRE LINE telomeric 10420 10453 -10 7 596 2172 173 138 31 chrUextra 1467485 1468027 -27536629 + TART LINE telomeric 9687 10286 -4191 7 596 8668 57 8 3 chrUextra 1468166 1469267 -27535389 + R1_DM LINE R1 3 1109 -4247 7 596 825 118 0 0 chrUextra 1469368 1469495 -27535161 - ARS406_DM Unknown Unknown -225 128 2 7 596 4262 210 15 19 chrUextra 1469390 1470471 -27534185 + SAR_DM Satellite Satellite 180 1256 -216 7 596 985 55 0 0 chrUextra 1470380 1470507 -27534149 - ARS406_DM Unknown Unknown -164 189 63 7 596 614 300 86 13 chrUextra 1470663 1470977 -27533679 - NINJA_I LTR Pao -2487 3524 3188 7 596 364 301 11 11 chrUextra 1471480 1471650 -27533006 - Invader2_I LTR Gypsy -630 3962 3872 7 596 5069 2 0 0 chrUextra 1471845 1472388 -27532268 + R2_DM LINE R2 3065 3607 0 7 596 667 27 0 0 chrUextra 1472391 1472465 -27532191 + LSU-rRNA_Dme rRNA rRNA 2578 2651 -1249 7 596 4486 12 4 0 chrUextra 1472481 1472983 -27531673 + R1_DM LINE R1 1 504 -4852 7 596 2877 174 8 11 chrUextra 1473083 1474219 -27530437 + SAR_DM Satellite Satellite 1 1132 -569 7 596 1704 111 115 0 chrUextra 1474872 1475160 -27529496 + MAX_LTR LTR Pao 1 321 0 7 596 2011 33 3 97 chrUextra 1475160 1475459 -27529197 + MAX_I LTR Pao 1 271 -7643 7 596 10335 2 1 0 chrUextra 1475559 1476697 -27527959 - G_DM LINE Jockey -167 4179 3041 7 596 1137 138 64 21 chrUextra 1476798 1477220 -27527436 - DNAREP1_DM LINE Penelope -262 332 86 7 596 2636 244 49 31 chrUextra 1477219 1477934 -27526722 - Gypsy6_I LTR Gypsy -2332 4680 3953 7 596 5706 3 0 0 chrUextra 1478034 1478649 -27526007 + LSU-rRNA_Dme rRNA rRNA 1967 2581 -1319 7 596 4696 2 2 0 chrUextra 1478664 1479171 -27525485 + R2_DM LINE R2 1820 2327 -1280 7 596 5055 0 0 0 chrUextra 1479271 1479814 -27524842 + IVK_DM LINE I 4409 4951 -451 7 596 2860 58 8 3 chrUextra 1479814 1480176 -27524480 - Gypsy10_LTR LTR Gypsy 0 364 1 7 596 587 48 0 98 chrUextra 1480176 1480268 -27524388 - Gypsy10_I LTR Gypsy 0 5278 5196 7 596 846 97 227 0 chrUextra 1481113 1481267 -27523389 + FB4_DM DNA Tc1 3 191 -3898 7 596 670 93 41 0 chrUextra 1481260 1481357 -27523299 - Baggins1 LINE LOA -626 4827 4727 7 596 27 29 0 0 chrUextra 1481596 1481630 -27523026 + AT_rich Low_complexity Low_complexity 1 34 0 7 596 3676 195 211 5 chrUextra 1481746 1482810 -27521846 - DMRT1A LINE R1 -275 4908 3640 7 596 189 74 0 0 chrUextra 1482810 1482837 -27521819 + (TATG)n Simple_repeat Simple_repeat 3 29 0 7 596 1188 150 99 5 chrUextra 1482837 1482878 -27521778 - DMRT1A LINE R1 -1544 3639 3579 7 596 5292 42 17 13 chrUextra 1482990 1484113 -27520543 + Transib5 DNA Transib 997 2165 -836 7 596 8960 49 22 3 chrUextra 1484213 1485348 -27519308 - TART LINE telomeric -4096 10381 9225 7 596 1542 0 0 0 chrUextra 1485450 1485616 -27519040 - LSU-rRNA_Dme rRNA rRNA -3734 166 1 7 596 21 95 0 0 chrUextra 1485628 1485691 -27518965 + AT_rich Low_complexity Low_complexity 1 63 0 7 596 34 24 0 0 chrUextra 1485904 1485945 -27518711 + AT_rich Low_complexity Low_complexity 1 41 0 7 596 884 120 5 19 chrUextra 1486682 1487290 -27517366 + RSP Satellite Satellite 1 599 0 7 596 547 276 23 65 chrUextra 1487544 1487807 -27516849 - FROGGER_I LTR Copia -40 2037 1786 7 596 989 246 131 7 chrUextra 1487916 1488206 -27516450 + Gypsy3_I LTR Gypsy 1906 2231 -3946 7 596 1020 249 12 12 chrUextra 1488220 1488464 -27516192 + Gypsy2_I LTR Gypsy 1847 2090 -4045 7 596 4828 9 34 0 chrUextra 1489150 1489708 -27514948 + IDEFIX_LTR LTR Gypsy 18 594 0 7 596 254 270 67 67 chrUextra 1489811 1490021 -27514635 + TIRANT_I LTR Gypsy 5093 5302 -2390 7 596 618 242 34 31 chrUextra 1490065 1490283 -27514373 + ZAM_I LTR Gypsy 5236 5432 -2058 7 596 4337 14 0 2 chrUextra 1490384 1490875 -27513781 + Copia2_I LTR Copia 3673 4162 0 7 596 233 29 0 0 chrUextra 1490875 1490907 -27513749 + Copia2_LTR_DM LTR Copia 1 32 -166 7 596 3436 10 60 0 chrUextra 1490907 1491306 -27513350 + Invader1_LTR LTR Gypsy 1 423 0 7 596 1557 6 0 0 chrUextra 1491306 1491476 -27513180 + Copia2_LTR_DM LTR Copia 29 198 0 7 596 4041 15 2 0 chrUextra 1491618 1492073 -27512583 - PROTOP_A DNA P -649 456 1 7 596 1433 93 0 15 chrUextra 1492184 1492381 -27512275 - PROTOP_A DNA P -1 1104 907 7 596 269 169 361 33 chrUextra 1492345 1492467 -27512189 + Invader3_I LTR Gypsy 1538 1699 -3189 7 596 372 243 5 139 chrUextra 1492545 1492752 -27511904 + Gypsy_LTR LTR Gypsy 29 204 -291 7 596 2161 251 30 16 chrUextra 1492855 1493429 -27511227 - TOM_I LTR Gypsy -842 5270 4689 7 596 2631 194 15 19 chrUextra 1493446 1493976 -27510680 - TOM_I LTR Gypsy -3152 2960 2433 7 596 9408 45 5 0 chrUextra 1494086 1495220 -27509436 - TAHRE LINE telomeric -4082 6381 5242 7 596 4563 0 0 0 chrUextra 1495320 1495832 -27508824 - DM297_I LTR Gypsy -538 5629 5118 7 596 5590 9 0 0 chrUextra 1495822 1496453 -27508203 - DM297_I LTR Gypsy -2278 3889 3259 7 596 2889 110 11 52 chrUextra 1496553 1497015 -27507641 + Gypsy12_LTR LTR Gypsy 1871 2313 -23 7 596 881 191 184 70 chrUextra 1497010 1497433 -27507223 + HETA LINE telomeric 5441 5910 -171 7 596 1394 49 0 98 chrUextra 1497482 1497686 -27506970 + PROTOP_B DNA P 1 184 -969 7 596 9474 37 0 4 chrUextra 1497786 1498919 -27505737 + G2_DM LINE Jockey 1043 2170 -932 7 596 822 234 116 11 chrUextra 1499084 1499361 -27505295 + BS LINE Jockey 3133 3438 -1688 7 596 1134 188 51 33 chrUextra 1499420 1499695 -27504961 - DMCR1A LINE CR1 -2065 2405 2126 7 596 1658 193 16 41 chrUextra 1500252 1500655 -27504001 + Gypsy3_LTR LTR Gypsy 31 392 -6 7 596 444 54 0 159 chrUextra 1500713 1500801 -27503855 + BLOOD_LTR LTR Gypsy 185 258 -141 7 596 3692 39 13 13 chrUextra 1500916 1501384 -27503272 + BLOOD_I LTR Gypsy 1 468 -6145 7 596 893 0 0 0 chrUextra 1501486 1501581 -27503075 - MDG1_I LTR Gypsy -6501 95 1 7 596 3184 14 0 0 chrUextra 1501581 1501937 -27502719 - MDG1_LTR LTR Gypsy 0 442 87 7 596 423 100 0 0 chrUextra 1501937 1502007 -27502649 + (TTA)n Simple_repeat Simple_repeat 3 72 0 7 596 5334 3 0 0 chrUextra 1502023 1502616 -27502040 + MDG1_I LTR Gypsy 4354 4946 -1650 7 596 2586 111 3 3 chrUextra 1502716 1503076 -27501580 - R1_DM LINE R1 -3898 1458 1099 7 596 414 146 68 110 chrUextra 1503076 1503222 -27501434 - R1_DM LINE R1 -4651 705 566 7 596 3144 121 79 71 chrUextra 1503217 1503848 -27500808 - R1_DM LINE R1 -4686 670 35 7 596 2542 104 16 30 chrUextra 1503952 1505079 -27499577 - DMSAT6 Satellite Satellite 0 1110 1 7 596 9097 49 10 3 chrUextra 1505180 1506312 -27498344 - R1_DM LINE R1 -4109 1247 109 7 596 30 45 0 0 chrUextra 1507222 1507266 -27497390 + AT_rich Low_complexity Low_complexity 1 44 0 7 596 950 91 7 7 chrUextra 1507393 1507537 -27497119 - DNAREP1_DM LINE Penelope -450 144 1 7 596 3286 191 13 14 chrUextra 1507644 1508776 -27495880 + SAR_DM Satellite Satellite 1 1130 -208 7 596 523 0 0 0 chrUextra 1508876 1508936 -27495720 - TABOR_I LTR Gypsy -6276 60 1 7 596 4737 0 0 0 chrUextra 1508936 1509442 -27495214 - TABOR_LTR LTR Gypsy 0 506 1 7 596 4336 57 0 34 chrUextra 1509442 1510006 -27494650 - Gypsy10_I LTR Gypsy -2215 3063 2519 7 596 10053 24 9 1 chrUextra 1510107 1511238 -27493418 + MAX_I LTR Pao 5668 6807 -1107 7 596 708 229 240 11 chrUextra 1511338 1511685 -27492971 - BS LINE Jockey -2678 2448 2023 7 596 876 306 39 11 chrUextra 1512112 1512469 -27492187 - BS LINE Jockey -3465 1661 1295 7 596 4889 17 0 0 chrUextra 1512569 1513103 -27491553 - Gypsy6_I LTR Gypsy -1038 5974 5441 7 596 5586 7 0 0 chrUextra 1513098 1513700 -27490956 - Gypsy6_I LTR Gypsy -2479 4533 3932 7 596 242 32 0 0 chrUextra 1513800 1513831 -27490825 - BATUMI_I LTR Pao -7932 31 1 7 596 2164 32 7 31 chrUextra 1513831 1514121 -27490535 - BATUMI_I LTR Pao -679 7284 7002 7 596 1886 36 0 5 chrUextra 1516260 1516482 -27488174 + CIRCE LINE Composite 1665 1885 -4471 7 596 663 286 51 51 chrUextra 1516488 1516820 -27487836 + Gypsy12_I LTR Gypsy 3835 4166 -1380 7 596 6845 31 33 16 chrUextra 1516549 1517388 -27487268 + CIRCE LINE Composite 1884 2737 -3619 7 596 285 227 0 0 chrUextra 1517490 1517556 -27487100 + DMRT1B LINE R1 2644 2709 -2474 7 596 425 177 0 12 chrUextra 1517547 1517627 -27487029 + DMRT1B LINE R1 3671 3749 -1434 7 596 3516 110 112 2 chrUextra 1517585 1518140 -27486516 - DMRT1B LINE R1 -1434 3749 3134 7 596 550 262 73 6 chrUextra 1518171 1518336 -27486320 + Gypsy12_I LTR Gypsy 3154 3329 -2217 7 596 10300 5 0 0 chrUextra 1518720 1519850 -27484806 + TART LINE telomeric 11304 12433 -2044 7 596 4593 4 0 0 chrUextra 1519950 1520461 -27484195 + DOC LINE Jockey 4215 4725 0 7 596 3061 9 0 0 chrUextra 1520460 1520796 -27483860 - Copia2_I LTR Copia -3675 487 152 7 596 241 280 39 78 chrUextra 1520846 1520974 -27483682 - DM1731_I LTR Copia -3324 652 530 7 596 6471 3 70 4 chrUextra 1521179 1522002 -27482654 + MDG1_I LTR Gypsy 5732 6799 -98 7 596 423 100 0 0 chrUextra 1522006 1522076 -27482580 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 596 2059 17 0 0 chrUextra 1522076 1522306 -27482350 + MDG1_LTR LTR Gypsy 87 316 -126 7 596 8031 31 34 30 chrUextra 1522408 1523470 -27481186 + PROTOP_A DNA P 40 1105 0 7 596 2506 104 25 42 chrUextra 1523637 1524752 -27479904 + DMSAT6 Satellite Satellite 1 1096 -46 7 596 4564 4 0 0 chrUextra 1524866 1525361 -27479295 + LSU-rRNA_Dme rRNA rRNA 1965 2459 -1441 7 596 5968 6 0 0 chrUextra 1525355 1525995 -27478661 + R2_DM LINE R2 1321 1960 -1647 7 596 3874 92 29 29 chrUextra 1526095 1526678 -27477978 - R1_DM LINE R1 -4200 1156 574 7 596 916 103 99 31 chrUextra 1526679 1526840 -27477816 - R1_DM LINE R1 -5184 172 1 7 596 2084 65 3 35 chrUextra 1526858 1527147 -27477509 + Gypsy6A_LTR LTR Gypsy 71 350 -70 7 596 610 64 0 0 chrUextra 1527146 1527224 -27477432 - Stalker2_I LTR Gypsy -4238 3164 3087 7 596 7593 74 39 5 chrUextra 1527324 1528439 -27476217 + R1_DM LINE R1 1829 3740 -1616 7 596 9869 13 1 15 chrUextra 1528553 1529681 -27474975 - CIRCE LINE Composite -1789 4567 3456 7 596 8160 26 5 0 chrUextra 1529781 1530710 -27473946 + R1_DM LINE R1 4327 5260 -96 7 596 1528 65 5 10 chrUextra 1530708 1530909 -27473747 + R1_DM LINE R1 164 363 -4993 7 596 355 277 281 20 chrUextra 1531210 1531505 -27473151 - Ulysses_I LTR Gypsy -1486 4895 4524 7 596 241 259 0 0 chrUextra 1531630 1531684 -27472972 - Ulysses_I LTR Gypsy -2002 4379 4326 7 596 235 118 0 0 chrUextra 1532013 1532047 -27472609 + Gypsy8_LTR LTR Gypsy 8 41 -263 7 596 4988 46 3 9 chrUextra 1532237 1533364 -27471292 - BATUMI_I LTR Pao -2075 5888 4626 7 596 4549 11 0 4 chrUextra 1533464 1533990 -27470666 + TART LINE telomeric 13954 14477 0 7 596 855 176 12 29 chrUextra 1534010 1534180 -27470476 + HETRP_DM Satellite Satellite 1516 1682 -190 7 596 243 208 0 19 chrUextra 1534223 1534277 -27470379 + HETRP_DM Satellite Satellite 1580 1632 -240 7 596 336 174 250 42 chrUextra 1534324 1534420 -27470236 + HETRP_DM Satellite Satellite 1519 1634 -238 7 596 638 190 8 16 chrUextra 1534468 1534591 -27470065 + HETRP_DM Satellite Satellite 1516 1637 -235 7 596 514 115 82 55 chrUextra 1534693 1534803 -27469853 - DNAREP1_DM LINE Penelope -465 129 17 7 596 961 96 17 19 chrUextra 1535981 1536905 -27467751 + RSP Satellite Satellite 1 922 -1 7 596 758 89 18 18 chrUextra 1536931 1537045 -27467611 + RSP Satellite Satellite 2 115 -3 7 596 5885 14 21 4 chrUextra 1537145 1537842 -27466814 + PROTOP_A DNA P 397 1105 0 7 596 2400 87 165 33 chrUextra 1537842 1538272 -27466384 + TART_B1 LINE telomeric 3614 4100 -6554 7 596 26 0 0 0 chrUextra 1539459 1539485 -27465171 + AT_rich Low_complexity Low_complexity 1 26 0 7 596 3216 11 37 13 chrUextra 1539598 1539972 -27464684 + CIRCE LINE Composite 3990 4372 -1984 7 596 1785 10 5 0 chrUextra 1539972 1540170 -27464486 + Invader1_LTR LTR Gypsy 1 199 -224 7 596 4185 25 4 4 chrUextra 1540170 1540652 -27464004 - Gypsy_LTR LTR Gypsy 0 482 1 7 596 608 14 0 14 chrUextra 1540652 1540724 -27463932 - Gypsy_I LTR Gypsy 0 6507 6437 7 596 8873 41 49 11 chrUextra 1540824 1541950 -27462706 + DMCR1A LINE CR1 1605 2773 -1697 7 596 5591 20 1 0 chrUextra 1542050 1543175 -27461481 + DM1731_I LTR Copia 383 1552 -2424 7 596 2180 20 88 0 chrUextra 1543275 1543763 -27460893 + DMCR1A LINE CR1 1456 1986 -2484 7 596 5761 25 1 0 chrUextra 1543749 1544400 -27460256 + DMCR1A LINE CR1 3416 4067 -403 7 596 1828 19 0 5 chrUextra 1544507 1544714 -27459942 + R1_DM LINE R1 5151 5356 0 7 596 6676 64 34 2 chrUextra 1544747 1545625 -27459031 + R1_DM LINE R1 1 906 -4450 7 596 1082 162 8 95 chrUextra 1545726 1545978 -27458678 - TART LINE telomeric -5085 9392 9163 7 596 3359 176 25 66 chrUextra 1546006 1546850 -27457806 - HETA LINE telomeric -2027 4054 3246 7 596 327 87 0 0 chrUextra 1546951 1546997 -27457659 - BARI1 DNA Tc1 -1668 82 37 7 596 2148 12 0 8 chrUextra 1548175 1548420 -27456236 + CIRCE LINE Composite 3530 3772 -2584 7 596 7319 21 20 17 chrUextra 1548415 1549299 -27455357 + CIRCE LINE Composite 3952 4838 -1518 7 596 3476 63 130 14 chrUextra 1549399 1550099 -27454557 - TART LINE telomeric -6963 7514 6734 7 596 615 256 82 62 chrUextra 1550151 1550513 -27454143 - TART_B1 LINE telomeric -1448 9206 8847 7 596 8173 81 1 5 chrUextra 1550629 1551747 -27452909 - IDEFIX_I LTR Gypsy -1901 3727 2615 7 596 5682 8 51 1 chrUextra 1551847 1552971 -27451685 + Gypsy4_I LTR Gypsy 2989 4168 -2120 7 596 227 274 14 14 chrUextra 1553147 1553221 -27451435 + DIVER2_I LTR Pao 1965 2038 -2109 7 596 630 176 76 46 chrUextra 1553695 1553892 -27450764 + DMCR1A LINE CR1 4227 4429 -41 7 596 21 0 0 0 chrUextra 1554014 1554035 -27450621 + AT_rich Low_complexity Low_complexity 1 21 0 7 596 1204 174 77 58 chrUextra 1554295 1554817 -27449839 - HETA LINE telomeric -5468 613 1 7 596 2765 175 17 9 chrUextra 1554848 1555373 -27449283 - TAHRE LINE telomeric -4 10459 9931 7 596 1047 49 61 20 chrUextra 1555523 1555670 -27448986 - BATUMI_LTR LTR Pao -119 153 1 7 596 1845 125 113 32 chrUextra 1556035 1556414 -27448242 - DNAREP1_DM LINE Penelope -168 426 17 7 596 2586 89 7 38 chrUextra 1556965 1557856 -27446800 - DMSAT6 Satellite Satellite -32 863 1 7 596 1073 35 6 90 chrUextra 1557967 1558123 -27446533 + Baggins1 LINE LOA 5311 5453 0 7 596 3076 67 14 17 chrUextra 1558559 1558972 -27445684 + Baggins1 LINE LOA 4780 5191 -262 7 596 1686 250 26 61 chrUextra 1559191 1559721 -27444935 - Gypsy3_I LTR Gypsy -4432 1745 859 7 596 303 192 89 38 chrUextra 1559731 1559888 -27444768 - TLD2 Unknown Unknown -47 171 7 7 596 273 237 118 0 chrUextra 1559833 1559909 -27444747 - Gypsy_DS LTR Gypsy -4190 3332 3248 7 596 2555 66 65 16 chrUextra 1559930 1560314 -27444342 + DMCR1A LINE CR1 2 404 -4066 7 596 4608 0 0 0 chrUextra 1560414 1560950 -27443706 + DOC6_DM LINE Jockey 3687 4222 0 7 596 2069 213 68 2 chrUextra 1560962 1561404 -27443252 + TIRANT_I LTR Gypsy 2251 2721 -4971 7 596 1228 8 0 0 chrUextra 1561404 1561537 -27443119 + PROTOP_A DNA P 1 133 -972 7 596 785 43 0 0 chrUextra 1561637 1561729 -27442927 - R1_DM LINE R1 -2843 2513 2422 7 596 1836 23 0 18 chrUextra 1561730 1561948 -27442708 - ACCORD2_LTR LTR Gypsy -1 214 1 7 596 697 59 0 0 chrUextra 1561948 1562031 -27442625 - ACCORD2_I LTR Gypsy -8 7204 7122 7 596 1157 24 240 41 chrUextra 1562027 1562248 -27442408 - ACCORD2_I LTR Gypsy -5441 1771 1507 7 596 1765 33 176 0 chrUextra 1562329 1562509 -27442147 - ACCORD2_I LTR Gypsy -5845 1367 1178 7 596 228 86 0 0 chrUextra 1562509 1562544 -27442112 + (TTA)n Simple_repeat Simple_repeat 2 36 0 7 596 1765 33 176 0 chrUextra 1562544 1562607 -27442049 - ACCORD2_I LTR Gypsy -6035 1177 1083 7 596 1332 20 0 0 chrUextra 1562607 1562760 -27441896 + MICROPIA_LTR LTR Gypsy 1 153 -323 7 596 1543 85 0 19 chrUextra 1562860 1563075 -27441581 - BS LINE Jockey -4907 219 9 7 596 21 36 0 0 chrUextra 1563566 1563594 -27441062 + AT_rich Low_complexity Low_complexity 1 28 0 7 596 9097 38 56 3 chrUextra 1564083 1565205 -27439451 + Baggins1 LINE LOA 516 1697 -3756 7 596 1890 0 5 0 chrUextra 1565305 1565513 -27439143 - DM1731_I LTR Copia -3767 209 1 7 596 2855 39 0 0 chrUextra 1565513 1565849 -27438807 - DM1731_LTR LTR Copia 0 336 1 7 596 208 200 31 0 chrUextra 1565853 1565918 -27438738 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 596 38 39 0 0 chrUextra 1566375 1566427 -27438229 + AT_rich Low_complexity Low_complexity 1 52 0 7 596 3524 186 51 75 chrUextra 1566549 1567649 -27437007 - TART LINE telomeric -4522 9955 8967 7 596 545 293 153 42 chrUextra 1567765 1568261 -27436395 + Invader1_I LTR Gypsy 1465 1650 -1536 7 596 519 114 80 83 chrUextra 1568221 1568393 -27436263 - PROTOP_A DNA P -588 517 348 7 596 352 280 34 8 chrUextra 1568744 1568863 -27435793 + Invader4_I LTR Gypsy 1 122 -2291 7 596 2531 84 0 0 chrUextra 1568974 1569317 -27435339 + TRANSIB3 DNA Transib 1821 2163 -720 7 596 1078 77 45 0 chrUextra 1569317 1569473 -27435183 + ROVER-LTR_DM LTR Gypsy 1 163 -204 7 596 1386 342 7 8 chrUextra 1569484 1570088 -27434568 + GTWIN_I LTR Gypsy 3329 3931 -2490 7 596 5569 50 1 3 chrUextra 1570193 1570873 -27433783 + R1_DM LINE R1 1101 1779 -3577 7 596 2589 20 138 0 chrUextra 1570873 1571315 -27433341 + R1_DM LINE R1 1974 2476 -2880 7 596 8825 22 71 8 chrUextra 1571415 1572487 -27432169 - CIRCE LINE Composite -1702 4654 3515 7 596 269 122 20 0 chrUextra 1572484 1572533 -27432123 + Gypsy9_I LTR Gypsy 1895 1944 -2733 7 74 9660 26 33 0 chrUextra 1572636 1573757 -27430899 - R1_DM LINE R1 -1939 3417 2260 7 597 5188 92 35 5 chrUextra 1573857 1574978 -27429678 + BATUMI_I LTR Pao 3994 4991 -2972 7 597 1948 85 214 18 chrUextra 1575078 1575628 -27429028 + ACCORD2_I LTR Gypsy 1114 1771 -5441 7 597 729 56 0 0 chrUextra 1575624 1575714 -27428942 + ACCORD2_I LTR Gypsy 7122 7211 -1 7 597 1781 28 9 19 chrUextra 1575712 1575928 -27428728 + ACCORD2_LTR LTR Gypsy 1 214 -1 7 597 2371 22 4 0 chrUextra 1575929 1576198 -27428458 + R1_DM LINE R1 2422 2691 -2665 7 597 279 183 70 102 chrUextra 1576420 1576548 -27428108 - BS LINE Jockey -4967 159 36 7 597 488 113 0 0 chrUextra 1576551 1576622 -27428034 + DMCR1A LINE CR1 2526 2596 -1874 7 597 1215 126 87 5 chrUextra 1576626 1576833 -27427823 + DMCR1A LINE CR1 2771 2994 -1476 7 597 992 127 7 0 chrUextra 1576827 1576977 -27427679 + DMCR1A LINE CR1 3247 3397 -1073 7 597 1011 117 42 58 chrUextra 1577225 1577415 -27427241 - DNAREP1_DM LINE Penelope -5 589 403 7 597 214 293 12 24 chrUextra 1578050 1578134 -27426522 + (CGA)n Simple_repeat Simple_repeat 2 84 0 7 597 618 300 86 13 chrUextra 1579016 1579330 -27425326 + NINJA_I LTR Pao 3188 3524 -2487 7 597 298 264 65 9 chrUextra 1579453 1579560 -27425096 + NINJA_I LTR Pao 4448 4560 -1451 7 597 1952 43 8 12 chrUextra 1580328 1580585 -27424071 + CIRCE LINE Composite 4981 5236 -1120 7 597 4343 18 18 0 chrUextra 1580583 1581076 -27423580 + CIRCE LINE Composite 5546 6047 -309 7 597 2539 0 0 4 chrUextra 1581176 1581456 -27423200 - POGO DNA Pogo -1842 279 1 7 597 2039 22 0 0 chrUextra 1581456 1581683 -27422973 + Invader2_LTR LTR Gypsy 40 266 0 7 597 515 0 0 0 chrUextra 1581683 1581744 -27422912 + Invader2_I LTR Gypsy 1 61 -4531 7 597 718 164 0 0 chrUextra 1581942 1582058 -27422598 + DMRT1A LINE R1 3762 3877 -1306 7 597 796 193 214 14 chrUextra 1582080 1582295 -27422361 + DMRT1A LINE R1 3954 4211 -972 7 597 7291 77 12 42 chrUextra 1582395 1583511 -27421145 - HETA LINE telomeric -4932 1149 67 7 597 2545 3 0 0 chrUextra 1583614 1583896 -27420760 - Copia_I LTR Copia -4311 282 1 7 597 2345 7 4 4 chrUextra 1583896 1584172 -27420484 - Copia_LTR LTR Copia 0 276 1 7 597 1050 180 30 19 chrUextra 1584177 1584733 -27419923 + SAR_DM Satellite Satellite 1 561 -1040 7 597 9517 21 12 0 chrUextra 1584836 1585952 -27418704 + TART LINE telomeric 8340 9469 -5008 7 597 3951 100 14 9 chrUextra 1586053 1586609 -27418047 - Gypsy12_I LTR Gypsy -4214 1332 774 7 597 3953 110 35 0 chrUextra 1586605 1587170 -27417486 - Gypsy12_I LTR Gypsy -1646 3900 3316 7 597 4764 13 0 0 chrUextra 1587270 1587795 -27416861 - MICROPIA_I LTR Gypsy -3546 930 406 7 597 2392 15 0 0 chrUextra 1587793 1588056 -27416600 - MICROPIA_I LTR Gypsy -4213 263 1 7 597 2458 7 0 96 chrUextra 1588056 1588388 -27416268 - MICROPIA_LTR LTR Gypsy 0 476 177 7 597 2391 104 164 17 chrUextra 1588488 1588910 -27415746 - DMCR1A LINE CR1 -1641 2829 2346 7 597 1388 283 102 6 chrUextra 1588946 1589605 -27415051 - Gypsy4_I LTR Gypsy -2589 3699 2893 7 597 4030 5 0 2 chrUextra 1589706 1590147 -27414509 - IVK_DM LINE I -15 5387 4948 7 597 2885 58 8 3 chrUextra 1590147 1590509 -27414147 + Gypsy10_LTR LTR Gypsy 1 364 0 7 597 2128 80 0 41 chrUextra 1590509 1590824 -27413832 + Gypsy10_I LTR Gypsy 1 302 -4976 7 597 2154 79 0 0 chrUextra 1590924 1591216 -27413440 - IDEFIX_I LTR Gypsy -1508 4120 3829 7 597 315 326 24 89 chrUextra 1591300 1591546 -27413110 + ACCORD2_I LTR Gypsy 526 755 -6457 7 597 869 302 43 49 chrUextra 1591574 1592040 -27412616 + MICROPIA_I LTR Gypsy 2 464 -4012 7 597 749 20 10 19 chrUextra 1592142 1592245 -27412411 - CIRCE LINE Composite -1274 5082 4981 7 597 1147 23 0 0 chrUextra 1592603 1592734 -27411922 - CIRCE LINE Composite -1376 4980 4850 7 597 4146 24 0 36 chrUextra 1592731 1593260 -27411396 - CIRCE LINE Composite -1644 4712 4203 7 597 6784 25 0 0 chrUextra 1593360 1594130 -27410526 - R1_DM LINE R1 -2823 2533 1764 7 597 1726 102 32 46 chrUextra 1594125 1594477 -27410179 - R1_DM LINE R1 -3640 1716 1377 7 597 4486 56 27 15 chrUextra 1594577 1595161 -27409495 - BATUMI_I LTR Pao -3825 4138 3548 7 597 3354 73 56 144 chrUextra 1595794 1596434 -27408222 - CIRCE LINE Composite -4800 1556 973 7 597 2687 69 46 0 chrUextra 1596561 1596911 -27407745 - CIRCE LINE Composite -5386 970 605 7 597 3160 12 0 0 chrUextra 1597011 1597356 -27407300 + Gypsy4_I LTR Gypsy 5944 6288 0 7 597 2562 24 0 0 chrUextra 1597356 1597643 -27407013 + Gypsy4_LTR LTR Gypsy 1 287 0 7 597 2597 59 343 0 chrUextra 1597643 1598128 -27406528 - DOC3_DM LINE Jockey -3851 889 238 7 597 1841 108 22 4 chrUextra 1598228 1598498 -27406158 + DM176_I LTR Gypsy 3332 3606 -2814 7 597 2547 178 102 11 chrUextra 1598526 1599056 -27405600 + DM176_I LTR Gypsy 3704 4281 -2139 7 597 1189 29 0 0 chrUextra 1599055 1599192 -27405464 - DMCR1A LINE CR1 -3534 936 800 7 597 796 62 80 0 chrUextra 1599190 1599302 -27405354 - DMCR1A LINE CR1 -4063 407 287 7 597 189 139 0 0 chrUextra 1599302 1599345 -27405311 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 597 2706 31 0 9 chrUextra 1599445 1599768 -27404888 + R1_DM LINE R1 4950 5269 -87 7 597 1717 70 215 2 chrUextra 1599769 1600210 -27404446 + R1_DM LINE R1 77 611 -4745 7 597 1756 61 0 0 chrUextra 1600212 1600425 -27404231 + R1_DM LINE R1 1247 1459 -3897 7 597 1026 24 8 0 chrUextra 1600436 1600561 -27404095 + R1_DM LINE R1 1556 1681 -3675 7 597 1024 258 55 40 chrUextra 1600662 1601065 -27403591 - TOM_I LTR Gypsy -4389 1723 1315 7 597 2081 247 2 43 chrUextra 1601177 1601740 -27402916 - TOM_I LTR Gypsy -5087 1025 486 7 597 25 48 0 46 chrUextra 1602050 1602115 -27402541 + AT_rich Low_complexity Low_complexity 1 62 0 7 597 514 112 0 48 chrUextra 1602199 1602283 -27402373 + Baggins1 LINE LOA 5036 5115 -338 7 597 548 83 36 0 chrUextra 1602248 1602332 -27402324 - FB4_DM DNA Tc1 -3676 413 327 7 597 5508 43 0 9 chrUextra 1602335 1602993 -27401663 + Jockey2 LINE Jockey 2530 3181 -247 7 597 2649 105 28 21 chrUextra 1603097 1604209 -27400447 - DMSAT6 Satellite Satellite -66 1119 1 7 597 4134 2 0 0 chrUextra 1604309 1604752 -27399904 + TABOR_LTR LTR Gypsy 64 506 0 7 597 2411 178 11 16 chrUextra 1604752 1605424 -27399232 + Gypsy10_I LTR Gypsy 2867 3536 -2752 7 597 793 78 243 0 chrUextra 1605628 1605842 -27398814 + Invader2_LTR LTR Gypsy 1 266 0 7 597 5162 33 8 6 chrUextra 1605858 1606496 -27398160 + Invader2_I LTR Gypsy 2 640 -3952 7 597 1245 20 0 7 chrUextra 1606493 1606640 -27398016 + Invader2_I LTR Gypsy 1173 1318 -3274 7 597 1140 56 0 36 chrUextra 1606740 1606908 -27397748 + PROTOP_B DNA P 317 478 -675 7 597 1815 80 0 4 chrUextra 1606885 1607135 -27397521 + HOBO DNA hAT 330 578 -2438 7 597 581 81 0 0 chrUextra 1607132 1607206 -27397450 - Baggins1 LINE LOA -589 4864 4791 7 597 2936 37 34 0 chrUextra 1607313 1607663 -27396993 - Baggins1 LINE LOA -202 5251 4890 7 597 286 278 22 11 chrUextra 1608641 1608732 -27395924 - Invader4_I LTR Gypsy -539 1874 1783 7 597 9452 32 13 2 chrUextra 1609170 1610284 -27394372 + R1_DM LINE R1 1195 2320 -3036 7 597 4164 2 0 0 chrUextra 1610385 1610872 -27393784 + DOC6_DM LINE Jockey 3736 4222 0 7 597 1005 331 2 0 chrUextra 1611024 1611420 -27393236 - Copia2_I LTR Copia -54 4108 3712 7 597 4640 220 52 6 chrUextra 1611600 1612696 -27391960 - Stalker2_I LTR Gypsy -2458 4944 3262 7 597 955 283 216 7 chrUextra 1612988 1613558 -27391098 - BS LINE Jockey -3465 1661 973 7 597 2486 109 26 32 chrUextra 1614030 1615143 -27389513 + DMSAT6 Satellite Satellite 1 1105 -71 7 597 10302 2 4 0 chrUextra 1615243 1616357 -27388299 - TART LINE telomeric -6735 7742 6625 7 597 5698 25 52 14 chrUextra 1617671 1618484 -27386172 - PROTOP DNA P -3727 753 1 7 597 2575 30 10 3 chrUextra 1618484 1618784 -27385872 - DIVER2_I LTR Pao -518 3629 3328 7 597 3633 66 60 0 chrUextra 1618884 1619352 -27385304 + Baggins1 LINE LOA 4958 5453 0 7 597 24 0 0 0 chrUextra 1619389 1619413 -27385243 + AT_rich Low_complexity Low_complexity 1 24 0 7 597 496 0 0 0 chrUextra 1620097 1620150 -27384506 - ROVER-I_DM LTR Gypsy -6531 53 1 7 597 1455 125 59 116 chrUextra 1620150 1620539 -27384117 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 597 21 0 0 0 chrUextra 1620571 1620592 -27384064 + AT_rich Low_complexity Low_complexity 1 21 0 7 597 4562 10 0 0 chrUextra 1621310 1621805 -27382851 + Copia2_I LTR Copia 1766 2260 -1902 7 597 5533 31 5 0 chrUextra 1621781 1622423 -27382233 + Copia2_I LTR Copia 2369 3013 -1149 7 597 3669 40 12 20 chrUextra 1622525 1623013 -27381643 - TRANSIB3 DNA Transib -9 2874 2391 7 597 4130 49 109 15 chrUextra 1623021 1623636 -27381020 - TRANSIB3 DNA Transib -1577 1306 634 7 597 5282 27 0 0 chrUextra 1623736 1624335 -27380321 + MAX_I LTR Pao 2972 3570 -4344 7 597 4488 33 2 0 chrUextra 1624334 1624849 -27379807 + MAX_I LTR Pao 4017 4532 -3382 7 597 8708 16 27 17 chrUextra 1624949 1625537 -27379119 - DM176_I LTR Gypsy -5313 1107 513 7 597 181 30 29 57 chrUextra 1625537 1625572 -27379084 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 597 8708 16 27 17 chrUextra 1625572 1626062 -27378594 - DM176_I LTR Gypsy -5908 512 18 7 597 1407 263 42 67 chrUextra 1626620 1627244 -27377412 - Gypsy12_LTR LTR Gypsy -1214 1122 515 7 597 5285 65 60 19 chrUextra 1627374 1628353 -27376303 - PROTOP_B DNA P -193 960 1 7 597 4467 35 0 9 chrUextra 1628586 1629110 -27375546 - BATUMI_I LTR Pao -1854 6109 5591 7 597 5078 33 0 0 chrUextra 1629117 1629698 -27374958 - BATUMI_I LTR Pao -2922 5041 4461 7 597 8309 51 6 0 chrUextra 1629798 1630868 -27373788 + QUASIMODO_I LTR Gypsy 3177 4252 -1808 7 597 1702 24 0 0 chrUextra 1631010 1631216 -27373440 - Invader2_I LTR Gypsy -4386 206 1 7 597 2473 4 0 0 chrUextra 1631216 1631482 -27373174 - Invader2_LTR LTR Gypsy 0 266 1 7 597 4874 11 0 0 chrUextra 1632222 1632759 -27371897 + MICROPIA_I LTR Gypsy 728 1264 -3212 7 597 716 22 0 0 chrUextra 1632752 1632842 -27371814 + BS LINE Jockey 5037 5126 0 7 597 4596 6 0 0 chrUextra 1632838 1633334 -27371322 + MICROPIA_I LTR Gypsy 1249 1744 -2732 7 597 561 30 0 0 chrUextra 1634006 1634073 -27370583 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 597 1781 5 0 0 chrUextra 1634073 1634271 -27370385 - Copia2_LTR_DM LTR Copia 0 198 1 7 597 2314 18 0 0 chrUextra 1634271 1634546 -27370110 - Copia2_I LTR Copia 0 4162 3888 7 597 5900 2 2 0 chrUextra 1634646 1635282 -27369374 - DOC LINE Jockey -4088 637 1 7 597 2096 199 10 6 chrUextra 1635276 1635757 -27368899 + SAR_DM Satellite Satellite 267 749 -723 7 597 9234 3 9 0 chrUextra 1635971 1636968 -27367688 + SSU-rRNA_Dme rRNA rRNA 1 1006 -989 7 597 2817 34 3 0 chrUextra 1637068 1637387 -27367269 - DIVER_I LTR Pao -2032 3611 3292 7 597 1109 100 4 33 chrUextra 1637387 1637574 -27367082 - STALKER4_LTR LTR Gypsy -3 399 227 7 597 3813 5 7 2 chrUextra 1637574 1637995 -27366661 - Invader1_LTR LTR Gypsy 0 423 1 7 597 1538 16 11 0 chrUextra 1637995 1638179 -27366477 - Invader1_I LTR Gypsy 0 3186 3001 7 597 5514 171 5 36 chrUextra 1638286 1639387 -27365269 - HETA LINE telomeric -2282 3799 2734 7 597 302 0 0 0 chrUextra 1639490 1639523 -27365133 + Invader2_I LTR Gypsy 4560 4592 0 7 597 2406 15 0 0 chrUextra 1639523 1639789 -27364867 + Invader2_LTR LTR Gypsy 1 266 0 7 597 3198 40 0 0 chrUextra 1639789 1640165 -27364491 - PROTOP DNA P -4104 376 1 7 597 688 234 286 19 chrUextra 1640335 1640601 -27364055 - TAHRE LINE telomeric -188 10275 9939 7 597 6385 3 0 1 chrUextra 1640701 1641391 -27363265 - R2_DM LINE R2 -2916 691 3 7 597 3875 2 0 0 chrUextra 1641392 1641812 -27362844 - LSU-rRNA_Dme rRNA rRNA -1401 2499 2080 7 597 8997 48 10 3 chrUextra 1641912 1643022 -27361634 - R1_DM LINE R1 -4067 1289 172 7 597 27 29 0 0 chrUextra 1643137 1643171 -27361485 + AT_rich Low_complexity Low_complexity 1 34 0 7 597 875 28 19 9 chrUextra 1643494 1643601 -27361055 + Baggins1 LINE LOA 5346 5453 0 7 597 1524 52 5 0 chrUextra 1644041 1644232 -27360424 + Baggins1 LINE LOA 4791 4982 -471 7 597 1823 28 37 0 chrUextra 1644332 1644547 -27360109 - PROTOP_B DNA P -930 223 1 7 597 879 81 0 0 chrUextra 1644547 1644666 -27359990 + STALKER4_LTR LTR Gypsy 48 166 -236 7 597 52 41 0 0 chrUextra 1644978 1645051 -27359605 + AT_rich Low_complexity Low_complexity 1 73 0 7 597 21 36 0 0 chrUextra 1645100 1645128 -27359528 + AT_rich Low_complexity Low_complexity 1 28 0 7 597 234 229 0 0 chrUextra 1645391 1645439 -27359217 + HMSBEAGLE_I LTR Gypsy 1812 1859 -4670 7 597 3918 26 69 16 chrUextra 1645544 1646053 -27358603 + PROTOP_A DNA P 570 1105 0 7 597 5244 3 0 15 chrUextra 1646752 1647335 -27357321 - DOC LINE Jockey -4120 605 32 7 597 280 154 0 0 chrUextra 1647372 1647424 -27357232 - BS LINE Jockey -3054 2072 2021 7 597 1309 103 0 118 chrUextra 1647585 1647839 -27356817 + DIVER_LTR LTR Pao 1 224 0 7 597 4574 8 0 2 chrUextra 1647962 1648475 -27356181 - G6_DM LINE Jockey -1529 513 2 7 597 39 50 0 0 chrUextra 1648595 1648655 -27356001 + AT_rich Low_complexity Low_complexity 1 60 0 7 597 26 50 0 0 chrUextra 1648826 1648866 -27355790 + AT_rich Low_complexity Low_complexity 1 40 0 7 597 1439 41 0 0 chrUextra 1648901 1649072 -27355584 + ROO_LTR LTR Pao 1 171 -257 7 597 2550 108 14 29 chrUextra 1649172 1650282 -27354374 - DMSAT6 Satellite Satellite -101 1094 1 7 597 640 191 7 47 chrUextra 1650382 1650530 -27354126 - DOC LINE Jockey -437 4288 4147 7 597 46 0 0 0 chrUextra 1650564 1650610 -27354046 + AT_rich Low_complexity Low_complexity 1 46 0 7 597 1824 36 5 0 chrUextra 1650628 1650848 -27353808 + S2_DM DNA Tc1 748 968 -767 7 597 693 123 261 15 chrUextra 1650849 1651121 -27353535 - IDEFIX_LTR LTR Gypsy -253 341 3 7 597 2226 109 11 14 chrUextra 1651120 1651491 -27353165 - IDEFIX_I LTR Gypsy -2 5626 5257 7 597 5925 5 0 0 chrUextra 1651592 1652229 -27352427 - BS2 LINE Jockey -3882 839 203 7 597 4128 0 0 0 chrUextra 1652251 1652702 -27351954 + ACCORD_I LTR Gypsy 3490 3940 -2348 7 597 2347 112 92 33 chrUextra 1652802 1653283 -27351373 + STALKER4_I LTR Gypsy 703 1211 -5319 7 597 2614 17 3 0 chrUextra 1653283 1653580 -27351076 + Invader3_LTR LTR Gypsy 1 298 0 7 597 3064 0 0 0 chrUextra 1653580 1653911 -27350745 + Invader3_I LTR Gypsy 1 331 -4557 7 597 9103 32 18 19 chrUextra 1654011 1655120 -27349536 - R1_DM LINE R1 -419 4937 3830 7 597 9591 28 2 0 chrUextra 1655220 1656329 -27348327 - R1_DM LINE R1 -2441 2915 1805 7 597 9362 30 30 4 chrUextra 1656429 1657538 -27347118 - R1_DM LINE R1 -3050 2306 1169 7 597 1944 184 54 30 chrUextra 1657638 1658099 -27346557 + Stalker2_I LTR Gypsy 342 813 -6589 7 597 5063 13 26 5 chrUextra 1658096 1658108 -27346548 + STALKER4_I LTR Gypsy 2990 3002 -3528 7 597 281 47 0 23 chrUextra 1658108 1658152 -27346504 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 7 597 5063 13 26 5 chrUextra 1658152 1658746 -27345910 + STALKER4_I LTR Gypsy 3003 3609 -2921 7 597 6369 37 53 10 chrUextra 1658846 1659671 -27344985 + Transib5 DNA Transib 1550 2410 -591 7 597 846 79 18 0 chrUextra 1659674 1659788 -27344868 - DMCR1A LINE CR1 -2 4468 4353 7 597 1346 43 0 0 chrUextra 1659790 1659954 -27344702 - DMCR1A LINE CR1 -236 4234 4071 7 597 9798 18 0 0 chrUextra 1660054 1661162 -27343494 - NINJA_I LTR Pao -4368 1643 536 7 597 4481 206 14 38 chrUextra 1661262 1662370 -27342286 + HETA LINE telomeric 3044 4124 -1957 7 597 2270 19 4 0 chrUextra 1662470 1662726 -27341930 + PROTOP_A DNA P 849 1105 0 7 597 664 131 145 16 chrUextra 1662776 1662900 -27341756 - DNAREP1_DM LINE Penelope -128 466 327 7 597 705 200 14 7 chrUextra 1662933 1663074 -27341582 - Invader3_I LTR Gypsy -4068 820 679 7 597 249 203 0 33 chrUextra 1663070 1663131 -27341525 + DMCR1A LINE CR1 4411 4469 -1 7 597 1973 184 73 14 chrUextra 1663152 1663577 -27341079 - DMCR1A LINE CR1 -1499 2971 2522 7 597 273 253 90 50 chrUextra 1663747 1663847 -27340809 + DNAREP1_DM LINE Penelope 489 592 -2 7 597 356 161 10 147 chrUextra 1664086 1664188 -27340468 - DNAREP1_DM LINE Penelope -6 588 501 7 597 1054 69 69 0 chrUextra 1664192 1664352 -27340304 + S2_DM DNA Tc1 1 171 -1564 7 597 348 173 0 58 chrUextra 1664371 1664457 -27340199 - DNAREP1_DM LINE Penelope -26 568 488 7 597 286 175 117 58 chrUextra 1664580 1664683 -27339973 - Gypsy2_LTR LTR Gypsy -150 203 95 7 597 258 286 0 0 chrUextra 1664697 1664767 -27339889 - Gypsy2_I LTR Gypsy -91 6044 5975 7 597 315 188 112 0 chrUextra 1664897 1664977 -27339679 - DNAREP1_DM LINE Penelope -439 155 67 7 597 612 208 70 13 chrUextra 1665111 1665267 -27339389 + HETRP_DM Satellite Satellite 1518 1682 -190 7 597 612 208 70 13 chrUextra 1665398 1665554 -27339102 + HETRP_DM Satellite Satellite 1518 1682 -190 7 597 817 170 32 19 chrUextra 1665684 1665840 -27338816 + HETRP_DM Satellite Satellite 1518 1675 -197 7 597 842 134 7 14 chrUextra 1665847 1665991 -27338665 - HOBO DNA hAT 0 3016 2874 7 597 817 53 0 42 chrUextra 1666094 1666212 -27338444 - Gypsy4_LTR LTR Gypsy -174 113 1 7 597 939 34 264 0 chrUextra 1666627 1666771 -27337885 - PROTOP_B DNA P -971 182 1 7 597 333 89 0 0 chrUextra 1666774 1666819 -27337837 + DMRT1B LINE R1 5125 5169 -14 7 597 977 156 61 0 chrUextra 1667017 1667197 -27337459 + Invader3_I LTR Gypsy 4491 4681 -207 7 597 4609 135 55 38 chrUextra 1667297 1668403 -27336253 + DM297_I LTR Gypsy 2278 3389 -2778 7 597 361 285 103 27 chrUextra 1668641 1668825 -27335831 - Ulysses_I LTR Gypsy -1486 4895 4698 7 597 265 298 11 11 chrUextra 1668840 1668935 -27335721 - Ulysses_I LTR Gypsy -1762 4619 4525 7 597 235 118 0 0 chrUextra 1669440 1669474 -27335182 + Gypsy8_LTR LTR Gypsy 8 41 -263 7 597 877 84 8 18 chrUextra 1669709 1670324 -27334332 - RSP Satellite Satellite -83 609 1 7 597 961 80 29 22 chrUextra 1670350 1670814 -27333842 - RSP Satellite Satellite 0 467 1 7 597 815 30 0 20 chrUextra 1670914 1671015 -27333641 + R1_DM LINE R1 5258 5356 0 7 597 7396 59 3 24 chrUextra 1671048 1672019 -27332637 + R1_DM LINE R1 1 951 -4405 7 597 4758 56 32 15 chrUextra 1672119 1673224 -27331432 + STALKER4_I LTR Gypsy 866 2073 -4457 7 597 1914 47 54 0 chrUextra 1673325 1673759 -27330897 - DOC2_DM LINE Jockey -4296 497 6 7 597 1918 279 28 16 chrUextra 1673783 1674399 -27330257 - TOM_I LTR Gypsy -880 5232 4610 7 597 265 196 36 0 chrUextra 1674373 1674429 -27330227 - DM176_I LTR Gypsy -2846 3574 3517 7 597 2443 45 3 6 chrUextra 1674529 1674842 -27329814 + Gypsy6A_LTR LTR Gypsy 13 408 -12 7 597 6169 23 24 61 chrUextra 1674842 1675634 -27329022 + Gypsy12_LTR LTR Gypsy 1 763 -1573 7 597 4715 19 4 0 chrUextra 1675734 1676266 -27328390 + R2_DM LINE R2 2750 3283 -324 7 597 2328 193 6 44 chrUextra 1676340 1676838 -27327818 - Gypsy12_LTR LTR Gypsy -1777 559 81 7 597 9176 52 0 1 chrUextra 1676938 1678042 -27326614 + HETA LINE telomeric 1639 2741 -3340 7 597 1398 303 70 36 chrUextra 1678144 1679244 -27325412 + MDG1_I LTR Gypsy 1811 2947 -3649 7 597 1698 45 0 0 chrUextra 1679346 1679547 -27325109 - PROTOP_A DNA P -904 201 1 7 597 917 228 91 13 chrUextra 1679547 1679778 -27324878 - TOM_I LTR Gypsy -2137 3975 3727 7 597 275 235 15 0 chrUextra 1679852 1679920 -27324736 - TOM_I LTR Gypsy -3053 3059 2991 7 597 1671 44 126 9 chrUextra 1679907 1680138 -27324518 - Baggins1 LINE LOA -4495 958 701 7 597 1727 154 17 23 chrUextra 1680138 1680437 -27324219 + Gypsy12_LTR LTR Gypsy 1 297 -2039 7 597 9200 46 1 0 chrUextra 1680550 1681653 -27323003 - TAHRE LINE telomeric -4154 6309 5206 7 597 3502 8 0 0 chrUextra 1681753 1682133 -27322523 + Invader1_I LTR Gypsy 1458 1837 -1349 7 597 1948 304 70 17 chrUextra 1682960 1683896 -27320760 + Gypsy4_I LTR Gypsy 3727 4712 -1576 7 597 3843 244 73 23 chrUextra 1685372 1686461 -27318195 - Gypsy6_I LTR Gypsy -664 6348 5205 7 597 9438 27 31 0 chrUextra 1686561 1687663 -27316993 - R1_DM LINE R1 -2021 3335 2200 7 597 2364 58 409 2 chrUextra 1687824 1688301 -27316355 + PROTOP_B DNA P 176 847 -306 7 597 3029 150 7 24 chrUextra 1688273 1688857 -27315799 - Jockey2 LINE Jockey -1586 1842 1419 7 597 339 26 0 0 chrUextra 1688965 1689004 -27315652 + DM176_I LTR Gypsy 6382 6420 0 7 597 243 228 11 151 chrUextra 1689060 1689153 -27315503 + DMTOM1_LTR LTR Gypsy 190 269 -238 7 597 597 186 45 57 chrUextra 1689262 1689472 -27315184 + DMTOM1_LTR LTR Gypsy 284 488 -19 7 597 419 100 14 28 chrUextra 1689463 1689535 -27315121 + DMTOM1_LTR LTR Gypsy 340 410 0 7 597 3396 68 16 22 chrUextra 1689535 1690066 -27314590 + MDG1_I LTR Gypsy 5756 6499 -97 7 597 2446 87 34 21 chrUextra 1690166 1690558 -27314098 + Gypsy6A_LTR LTR Gypsy 25 420 0 7 597 1012 168 102 15 chrUextra 1690658 1690863 -27313793 + DMLTR5 LTR Gypsy 44 266 0 7 597 351 93 661 14 chrUextra 1690862 1690994 -27313662 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 7 597 9419 20 1 0 chrUextra 1691368 1692429 -27312227 + R1_DM LINE R1 4005 5066 -290 7 597 360 48 0 0 chrUextra 1692426 1692468 -27312188 + R1_DM LINE R1 5243 5284 -72 7 597 4308 23 2 0 chrUextra 1692568 1693087 -27311569 - Invader2_I LTR Gypsy -310 4282 3763 7 597 4676 26 12 0 chrUextra 1693095 1693669 -27310987 - Invader2_I LTR Gypsy -1245 3347 2767 7 597 1032 115 0 42 chrUextra 1693769 1693959 -27310697 + Invader1_I LTR Gypsy 2959 3140 -46 7 597 355 120 0 0 chrUextra 1694007 1694057 -27310599 + Invader1_I LTR Gypsy 3137 3186 0 7 597 1064 98 270 24 chrUextra 1694058 1694397 -27310259 + Invader1_LTR LTR Gypsy 2 423 0 7 597 1443 149 151 92 chrUextra 1694433 1694870 -27309786 - HMSBEAGLE_I LTR Gypsy -5891 638 176 7 597 582 0 0 15 chrUextra 1694970 1695037 -27309619 - MICROPIA_I LTR Gypsy -4410 66 1 7 597 4132 13 0 61 chrUextra 1695037 1695544 -27309112 - MICROPIA_LTR LTR Gypsy 0 476 1 7 597 3754 4 0 61 chrUextra 1695544 1696070 -27308586 - ROVER-I_DM LTR Gypsy -5681 903 410 7 597 2525 79 34 22 chrUextra 1696170 1696559 -27308097 + Gypsy6A_LTR LTR Gypsy 28 420 0 7 597 302 167 35 12 chrUextra 1696559 1696641 -27308015 + NTS_DM Other Other 122 205 -35 7 597 307 104 21 0 chrUextra 1696667 1696715 -27307941 + NTS_DM Other Other 1 49 -191 7 597 1107 154 29 21 chrUextra 1696797 1697035 -27307621 + NTS_DM Other Other 1 240 0 7 597 326 83 21 0 chrUextra 1697035 1697083 -27307573 + NTS_DM Other Other 1 49 -191 7 597 1470 44 5 16 chrUextra 1697085 1697270 -27307386 + G2_DM LINE Jockey 1401 1583 -1519 7 597 2997 94 19 46 chrUextra 1697370 1697849 -27306807 + TART LINE telomeric 6965 7430 -7047 7 597 1825 160 19 101 chrUextra 1697848 1698470 -27306186 + TART LINE telomeric 6655 6997 -7480 7 597 22 0 0 0 chrUextra 1699093 1699115 -27305541 + AT_rich Low_complexity Low_complexity 1 22 0 7 597 9181 16 10 6 chrUextra 1699770 1700870 -27303786 + QUASIMODO_I LTR Gypsy 808 1912 -4148 7 597 7420 17 17 2 chrUextra 1700970 1701809 -27302847 + Gypsy4_I LTR Gypsy 5438 6288 0 7 597 2353 11 4 0 chrUextra 1701809 1702070 -27302586 + Gypsy4_LTR LTR Gypsy 1 262 -25 7 597 9005 38 9 22 chrUextra 1702170 1703270 -27301386 + Gypsy3_I LTR Gypsy 1114 2199 -3978 7 74 2560 105 13 25 chrUextra 1703787 1704469 -27300187 + DMSAT6 Satellite Satellite 1 673 -37 7 598 3765 49 104 28 chrUextra 1704569 1705135 -27299521 + ROO_I LTR Pao 234 842 -7414 7 598 2058 25 0 0 chrUextra 1705171 1705411 -27299245 - FW_DM LINE Jockey -1853 2839 2600 7 598 2293 19 0 0 chrUextra 1705410 1705668 -27298988 - FW_DM LINE Jockey -2499 2193 1936 7 598 2294 56 0 10 chrUextra 1705768 1706056 -27298600 - MAX_I LTR Pao -5162 2752 2468 7 598 6147 53 26 17 chrUextra 1706034 1706855 -27297801 - MAX_I LTR Pao -5870 2044 1217 7 598 9485 30 3 4 chrUextra 1706967 1708065 -27296591 + MAX_I LTR Pao 4099 5195 -2719 7 598 2539 113 25 47 chrUextra 1708165 1709263 -27295393 - DMSAT6 Satellite Satellite -210 1073 1 7 598 2773 7 0 0 chrUextra 1709363 1709665 -27294991 - BARI_DM DNA Tc1 -1423 305 4 7 598 2293 4 0 0 chrUextra 1709665 1709918 -27294738 - BARI_DM DNA Tc1 -1 1727 1475 7 598 5125 2 0 0 chrUextra 1709902 1710461 -27294195 - BARI_DM DNA Tc1 -208 1520 962 7 598 708 191 13 26 chrUextra 1710581 1710737 -27293919 - HETRP_DM Satellite Satellite -190 1682 1529 7 598 705 191 13 26 chrUextra 1710858 1711014 -27293642 - HETRP_DM Satellite Satellite -190 1682 1529 7 598 721 184 13 26 chrUextra 1711138 1711294 -27293362 - HETRP_DM Satellite Satellite -190 1682 1529 7 598 691 196 11 69 chrUextra 1711418 1711593 -27293063 - HETRP_DM Satellite Satellite -190 1682 1518 7 598 4209 79 19 26 chrUextra 1711866 1712728 -27291928 - PROTOP_A DNA P 0 1153 297 7 598 293 188 0 0 chrUextra 1712728 1712792 -27291864 - Gypsy8_I LTR Gypsy -4054 293 230 7 598 4738 216 31 6 chrUextra 1712961 1714055 -27290601 - TOM_I LTR Gypsy -3041 3071 1951 7 598 2939 92 107 23 chrUextra 1714155 1714631 -27290025 - TART LINE telomeric -6843 7634 7119 7 598 2463 179 86 14 chrUextra 1714624 1715253 -27289403 - TART LINE telomeric -4911 9566 8957 7 598 1002 41 16 0 chrUextra 1715373 1715495 -27289161 - Baggins1 LINE LOA -15 5438 5315 7 598 1817 37 124 0 chrUextra 1715491 1715732 -27288924 - Baggins1 LINE LOA -456 4997 4727 7 598 23 50 0 48 chrUextra 1716192 1716255 -27288401 + AT_rich Low_complexity Low_complexity 1 60 0 7 598 2813 157 46 26 chrUextra 1716581 1717149 -27287507 - Stalker2_I LTR Gypsy -6547 855 277 7 598 219 36 0 0 chrUextra 1717150 1717178 -27287478 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 7 598 4424 2 0 0 chrUextra 1717178 1717649 -27287007 - BS LINE Jockey -28 5098 4628 7 598 2203 188 69 15 chrUextra 1717753 1718233 -27286423 + DMCR1A LINE CR1 2466 2971 -1499 7 598 249 203 0 33 chrUextra 1718254 1718315 -27286341 - DMCR1A LINE CR1 -1 4469 4411 7 598 3046 186 13 2 chrUextra 1718308 1718846 -27285810 + Invader3_I LTR Gypsy 675 1218 -3670 7 598 1508 6 6 6 chrUextra 1718947 1719123 -27285533 + QUASIMODO_LTR LTR Gypsy 483 658 0 7 598 7862 7 8 25 chrUextra 1719123 1720044 -27284612 + QUASIMODO_I LTR Gypsy 1 905 -5155 7 598 2095 151 12 86 chrUextra 1720144 1720894 -27283762 - TART LINE telomeric -10472 4005 3684 7 598 1713 119 37 91 chrUextra 1720890 1721241 -27283415 - TART LINE telomeric -11115 3362 3031 7 598 4879 53 33 20 chrUextra 1721341 1722031 -27282625 - ROO_I LTR Pao -6768 1488 790 7 598 352 21 0 0 chrUextra 1722390 1722438 -27282218 - ROO_I LTR Pao -7460 796 749 7 598 3749 45 44 10 chrUextra 1722538 1723034 -27281622 + DMCR1A LINE CR1 3958 4470 0 7 598 356 57 0 70 chrUextra 1723040 1723097 -27281559 + DNAREP1_DM LINE Penelope 508 560 -34 7 598 32 43 0 0 chrUextra 1723116 1723162 -27281494 + AT_rich Low_complexity Low_complexity 1 46 0 7 598 806 148 196 5 chrUextra 1724175 1724379 -27280277 - DNAREP1_DM LINE Penelope -70 524 282 7 598 1646 215 100 41 chrUextra 1724934 1725487 -27279169 + Gypsy12_LTR LTR Gypsy 1159 1726 -554 7 598 685 152 88 0 chrUextra 1725497 1725622 -27279034 + Gypsy12A_LTR LTR Gypsy 2127 2262 -18 7 598 838 253 65 47 chrUextra 1725629 1725907 -27278749 + TAHRE LINE telomeric 9807 10089 -374 7 598 529 125 89 0 chrUextra 1725907 1726019 -27278637 + TART LINE telomeric 10370 10491 -3986 7 598 9574 24 1 0 chrUextra 1726131 1727224 -27277432 - R1_DM LINE R1 -61 5295 4202 7 598 186 43 0 0 chrUextra 1728184 1728207 -27276449 + (CTG)n Simple_repeat Simple_repeat 3 25 0 7 598 4738 59 60 37 chrUextra 1728528 1729520 -27275136 + TRANSIB1 DNA Transib 491 1381 -1633 7 598 600 36 83 0 chrUextra 1729525 1729609 -27275047 + ACCORD2_I LTR Gypsy 2412 2502 -4710 7 598 4568 118 42 7 chrUextra 1729715 1730429 -27274227 + HETA LINE telomeric 2449 3187 -2894 7 598 905 95 35 24 chrUextra 1730591 1730810 -27273846 + TART LINE telomeric 9650 9822 -4655 7 598 8239 98 8 0 chrUextra 1730910 1732005 -27272651 - Gypsy12_I LTR Gypsy -735 4811 3708 7 598 9287 29 4 2 chrUextra 1732105 1733200 -27271456 - R1_DM LINE R1 -1244 4112 3016 7 598 4525 18 0 0 chrUextra 1733300 1733809 -27270847 - R1_DM LINE R1 -2890 2466 1958 7 598 4648 55 0 3 chrUextra 1733809 1734395 -27270261 - R1_DM LINE R1 -4558 798 215 7 598 4459 12 4 0 chrUextra 1734495 1734995 -27269661 - R1_DM LINE R1 -4854 502 1 7 598 501 18 0 0 chrUextra 1734995 1735050 -27269606 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 7 598 4419 2 79 2 chrUextra 1735047 1735590 -27269066 - R2_DM LINE R2 -13 3594 3010 7 598 5089 211 29 2 chrUextra 1735695 1736778 -27267878 + DM412 LTR Gypsy 3536 4647 -2250 7 598 239 167 21 0 chrUextra 1736887 1736935 -27267721 - NTS_DM Other Other -191 49 1 7 598 1079 138 39 22 chrUextra 1736935 1737164 -27267492 - NTS_DM Other Other 0 240 8 7 598 227 195 45 68 chrUextra 1737171 1737259 -27267397 - NTS_DM Other Other 0 240 155 7 598 296 125 21 0 chrUextra 1737262 1737310 -27267346 - NTS_DM Other Other -191 49 1 7 598 1172 129 15 5 chrUextra 1737341 1737544 -27267112 - NTS_DM Other Other -35 205 1 7 598 242 119 24 0 chrUextra 1737634 1737676 -27266980 - NTS_DM Other Other -191 49 7 7 598 463 121 70 39 chrUextra 1737682 1737811 -27266845 - NTS_DM Other Other 0 240 108 7 598 868 115 0 0 chrUextra 1737819 1737949 -27266707 - NTS_DM Other Other -103 137 8 7 598 2741 185 12 19 chrUextra 1738078 1739172 -27265484 - SAR_DM Satellite Satellite -444 1086 1 7 598 8896 28 1 1 chrUextra 1739272 1740303 -27264353 + R1_DM LINE R1 4326 5356 0 7 598 229 33 0 0 chrUextra 1740336 1740366 -27264290 + R1_DM LINE R1 1 30 -5326 7 598 4486 10 0 4 chrUextra 1740466 1740980 -27263676 + TART LINE telomeric 13966 14477 0 7 598 4428 65 9 0 chrUextra 1740986 1741560 -27263096 + HETA LINE telomeric 3839 4417 -1664 7 598 9393 25 0 2 chrUextra 1741660 1742750 -27261906 - R1_DM LINE R1 -2331 3025 1938 7 598 2434 242 95 64 chrUextra 1742859 1743786 -27260870 - Gypsy12_LTR LTR Gypsy -1368 968 13 7 598 1092 81 0 13 chrUextra 1743798 1743948 -27260708 - Gypsy12_I LTR Gypsy 0 5546 5399 7 598 3493 52 4 13 chrUextra 1744048 1744501 -27260155 + BATUMI_I LTR Pao 3182 3630 -4333 7 598 4810 65 0 5 chrUextra 1744482 1745089 -27259567 + BATUMI_I LTR Pao 4316 4919 -3044 7 598 478 77 0 0 chrUextra 1745077 1745142 -27259514 + BATUMI_I LTR Pao 5395 5459 -2504 7 598 8112 66 25 8 chrUextra 1745242 1746336 -27258320 - QUASIMODO_I LTR Gypsy -4461 1599 488 7 598 3268 45 17 63 chrUextra 1746436 1746913 -27257743 + DOC5_DM LINE Jockey 4197 4651 -31 7 598 242 0 61 0 chrUextra 1746915 1746948 -27257708 + (TATAA)n Simple_repeat Simple_repeat 2 36 0 7 598 5758 3 0 0 chrUextra 1747629 1748257 -27256399 + QUASIMODO_LTR LTR Gypsy 31 658 0 7 598 1901 39 0 41 chrUextra 1748257 1748523 -27256133 + BATUMI_I LTR Pao 668 922 -7041 7 598 1625 31 0 10 chrUextra 1748523 1748718 -27255938 + BATUMI_I LTR Pao 1630 1822 -6141 7 598 303 54 0 0 chrUextra 1748822 1748859 -27255797 + R1_DM LINE R1 5320 5356 0 7 598 4746 66 7 3 chrUextra 1748892 1749502 -27255154 + R1_DM LINE R1 1 612 -4744 7 598 1822 59 86 2 chrUextra 1749487 1749915 -27254741 + R1_DM LINE R1 1384 1847 -3509 7 598 1014 17 25 0 chrUextra 1750387 1750505 -27254151 + PROTOP_B DNA P 55 175 -978 7 598 3133 76 53 25 chrUextra 1750512 1751108 -27253548 + PROTOP_A DNA P 512 1081 -72 7 598 4693 55 45 0 chrUextra 1751208 1751803 -27252853 + TART_B1 LINE telomeric 2904 3525 -7129 7 598 3646 103 36 0 chrUextra 1751797 1752301 -27252355 + TART_B1 LINE telomeric 4319 4840 -5814 7 598 9466 18 15 1 chrUextra 1752401 1753494 -27251162 - R1_DM LINE R1 -1317 4039 2932 7 598 6621 67 53 69 chrUextra 1753594 1754687 -27249969 - ROO_I LTR Pao -6661 1595 520 7 598 9309 34 7 0 chrUextra 1754787 1755880 -27248776 + R1_DM LINE R1 1238 2338 -3018 7 598 343 80 0 39 chrUextra 1755980 1756032 -27248624 - DMTOM1_LTR LTR Gypsy -21 389 340 7 598 611 186 45 57 chrUextra 1756023 1756233 -27248423 - DMTOM1_LTR LTR Gypsy -19 488 284 7 598 41 58 0 0 chrUextra 1756517 1756586 -27248070 + AT_rich Low_complexity Low_complexity 1 69 0 7 598 24 106 0 0 chrUextra 1756969 1757063 -27247593 + AT_rich Low_complexity Low_complexity 1 94 0 7 598 21 89 0 0 chrUextra 1757661 1757717 -27246939 + AT_rich Low_complexity Low_complexity 1 56 0 7 598 21 89 0 0 chrUextra 1757807 1757863 -27246793 + AT_rich Low_complexity Low_complexity 1 56 0 7 598 29 47 0 0 chrUextra 1757901 1757944 -27246712 + AT_rich Low_complexity Low_complexity 1 43 0 7 598 28 71 0 0 chrUextra 1757988 1758044 -27246612 + AT_rich Low_complexity Low_complexity 1 56 0 7 598 668 37 37 0 chrUextra 1758183 1758264 -27246392 - PROTOP DNA P -3968 512 429 7 598 8856 44 4 4 chrUextra 1758364 1759455 -27245201 + IDEFIX_I LTR Gypsy 2321 3411 -2217 7 598 300 29 0 0 chrUextra 1760139 1760173 -27244483 + G2_DM LINE Jockey 2657 2690 -412 7 598 412 20 0 0 chrUextra 1760168 1760217 -27244439 - ROO_I LTR Pao -2762 5494 5446 7 598 3503 21 67 0 chrUextra 1760213 1760648 -27244008 - ROO_I LTR Pao -2970 5286 4823 7 598 4570 151 67 43 chrUextra 1760748 1761736 -27242920 + R1_DM LINE R1 4346 5356 0 7 598 544 31 0 0 chrUextra 1761769 1761834 -27242822 + R1_DM LINE R1 1 65 -5291 7 598 1081 40 67 0 chrUextra 1761940 1762089 -27242567 + PROTOP DNA P 3076 3234 -1246 7 598 786 21 0 11 chrUextra 1763132 1763226 -27241430 - NINJA_I LTR Pao -5918 93 1 7 598 2545 41 3 28 chrUextra 1763226 1763551 -27241105 - NINJA_LTR LTR Pao 0 317 1 7 598 803 64 9 0 chrUextra 1763551 1763661 -27240995 + G5_DM LINE Jockey 4737 4847 -9 7 598 307 178 439 8 chrUextra 1763693 1763823 -27240833 + PROTOP DNA P 1 186 -4294 7 598 3121 13 0 3 chrUextra 1764323 1764714 -27239942 - DM297_I LTR Gypsy -229 5938 5549 7 598 6131 13 0 0 chrUextra 1764705 1765414 -27239242 - DM297_I LTR Gypsy -1444 4723 4015 7 598 2553 0 3 3 chrUextra 1765514 1765797 -27238859 + Copia_I LTR Copia 4311 4593 0 7 598 2468 0 0 0 chrUextra 1765797 1766073 -27238583 + Copia_LTR LTR Copia 1 276 0 7 598 2445 192 11 8 chrUextra 1766070 1766605 -27238051 + SAR_DM Satellite Satellite 263 799 -673 7 598 4169 196 27 32 chrUextra 1766705 1767796 -27236860 + SAR_DM Satellite Satellite 67 1151 -321 7 598 3375 34 0 0 chrUextra 1767901 1768289 -27236367 - FW_DM LINE Jockey -4296 396 9 7 598 3116 213 59 0 chrUextra 1768306 1768987 -27235669 - ROVER-I_DM LTR Gypsy -2795 3789 3069 7 598 4959 26 3 0 chrUextra 1769087 1769660 -27234996 + DM1731_I LTR Copia 358 932 -3044 7 598 4728 4 2 0 chrUextra 1769661 1770178 -27234478 + IVK_DM LINE I 4744 5261 -141 7 598 4664 50 44 5 chrUextra 1770278 1770865 -27233791 + DMCR1A LINE CR1 1263 1872 -2598 7 598 2068 94 45 0 chrUextra 1770876 1771164 -27233492 + DMCR1A LINE CR1 3220 3520 -950 7 598 1655 57 42 0 chrUextra 1771157 1771369 -27233287 + DMCR1A LINE CR1 3655 3875 -595 7 598 2593 263 57 13 chrUextra 1771667 1772560 -27232096 + G6_DM LINE Jockey 243 1174 -868 7 598 310 220 98 41 chrUextra 1775129 1775252 -27229404 + Gypsy4_I LTR Gypsy 3461 3590 -2698 7 598 440 306 152 36 chrUextra 1775314 1775616 -27229040 + Gypsy4_I LTR Gypsy 4323 4659 -1629 7 598 307 141 263 32 chrUextra 1775588 1775683 -27228973 + BURDOCK_I LTR Gypsy 4727 4843 -1017 7 598 1333 132 123 4 chrUextra 1775720 1775964 -27228692 - DNAREP1_DM LINE Penelope -321 273 1 7 598 300 273 11 74 chrUextra 1776035 1776130 -27228526 + Gypsy4_I LTR Gypsy 4926 5005 -1283 7 598 9749 6 36 1 chrUextra 1776230 1777319 -27227337 - GTWIN_I LTR Gypsy -1248 5173 4047 7 598 9737 6 11 0 chrUextra 1777419 1778508 -27226148 + DOC LINE Jockey 780 1880 -2845 7 598 4526 30 0 2 chrUextra 1778608 1779140 -27225516 + HETA LINE telomeric 5551 6081 0 7 598 5130 4 0 0 chrUextra 1779143 1779697 -27224959 + TART LINE telomeric 11291 11844 -2633 7 598 3130 144 15 22 chrUextra 1779797 1780414 -27224242 + TAHRE LINE telomeric 9915 10663 -3814 7 598 1392 207 45 39 chrUextra 1780408 1780841 -27223815 + TAHRE LINE telomeric 6944 7304 -3159 7 598 3277 3 0 0 chrUextra 1780986 1781340 -27223316 + QUASIMODO_LTR LTR Gypsy 305 658 0 7 598 300 53 0 0 chrUextra 1781340 1781378 -27223278 + (TA)n Simple_repeat Simple_repeat 1 38 0 7 598 195 42 0 0 chrUextra 1781414 1781438 -27223218 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 598 26 30 0 0 chrUextra 1781752 1781785 -27222871 + AT_rich Low_complexity Low_complexity 1 33 0 7 598 9095 22 34 12 chrUextra 1782175 1783264 -27221392 - R1_DM LINE R1 -1642 3714 2602 7 598 9161 9 2 29 chrUextra 1783364 1784452 -27220204 - QUASIMODO_I LTR Gypsy -3360 2700 1643 7 598 5251 0 0 0 chrUextra 1784552 1785125 -27219531 + FW_DM LINE Jockey 4119 4691 -1 7 598 916 99 91 7 chrUextra 1785124 1785259 -27219397 - Invader1_I LTR Gypsy -1141 2045 1899 7 598 2939 50 79 0 chrUextra 1785259 1785639 -27219017 + PROTOP DNA P 1 410 -4070 7 598 5657 137 30 4 chrUextra 1785740 1786818 -27217838 + BATUMI_I LTR Pao 3629 4802 -3112 7 598 983 333 20 21 chrUextra 1786991 1787579 -27217077 - MICROPIA_I LTR Gypsy -3389 710 127 7 598 1184 105 41 0 chrUextra 1787588 1787760 -27216896 - IDEFIX_I LTR Gypsy -3784 1844 1666 7 598 2734 63 0 79 chrUextra 1788116 1788532 -27216124 + Gypsy8_I LTR Gypsy 1346 1728 -2619 7 598 667 84 7 51 chrUextra 1788516 1788654 -27216002 - DMSAT6 Satellite Satellite -71 399 268 7 598 3871 31 0 0 chrUextra 1788755 1789204 -27215452 + DMCR1A LINE CR1 2096 2544 -1926 7 598 3540 68 90 16 chrUextra 1789304 1789813 -27214843 + DMCR1A LINE CR1 1649 2195 -2275 7 598 2161 95 36 7 chrUextra 1789809 1790115 -27214541 + BS2 LINE Jockey 198 512 -4209 7 598 2002 92 7 0 chrUextra 1790110 1790391 -27214265 + BS2 LINE Jockey 1373 1655 -3066 7 598 4590 94 88 9 chrUextra 1790491 1791578 -27213078 + Gypsy12_I LTR Gypsy 1078 2250 -3296 7 598 3599 80 75 16 chrUextra 1791679 1792187 -27212469 - Gypsy12_I LTR Gypsy -614 4932 4395 7 598 813 143 4 42 chrUextra 1792171 1792355 -27212301 - Gypsy12_I LTR Gypsy -4853 693 459 7 598 1968 97 15 52 chrUextra 1792368 1792694 -27211962 - Gypsy12_I LTR Gypsy -5206 340 27 7 598 386 204 40 20 chrUextra 1792664 1792764 -27211892 - Gypsy12_LTR LTR Gypsy -1938 398 297 7 598 263 0 0 0 chrUextra 1792865 1792894 -27211762 - BARI_DM DNA Tc1 -1696 32 4 7 598 9478 1 40 0 chrUextra 1792894 1793952 -27210704 - BARI_DM DNA Tc1 -1 1727 628 7 598 7572 77 9 4 chrUextra 1794069 1795139 -27209517 + R1_DM LINE R1 1403 3517 -1839 7 598 8181 9 94 21 chrUextra 1795239 1796248 -27208408 - QUASIMODO_I LTR Gypsy -4977 1083 1 7 598 696 0 0 0 chrUextra 1796248 1796326 -27208330 - QUASIMODO_LTR LTR Gypsy 0 658 581 7 598 837 309 33 28 chrUextra 1796431 1796847 -27207809 + Copia2_I LTR Copia 1652 2116 -2477 7 598 28 0 0 0 chrUextra 1796908 1796936 -27207720 + AT_rich Low_complexity Low_complexity 1 28 0 7 598 277 340 48 19 chrUextra 1797302 1797512 -27207144 + Copia2_I LTR Copia 2452 2667 -1495 7 598 2183 8 4 0 chrUextra 1797612 1797858 -27206798 + R1_DM LINE R1 4036 4282 -1074 7 598 5220 30 54 0 chrUextra 1797878 1798504 -27206152 + R1_DM LINE R1 4407 5066 -290 7 598 1022 26 0 0 chrUextra 1798501 1798615 -27206041 + R1_DM LINE R1 5243 5356 0 7 598 406 40 0 0 chrUextra 1798648 1798698 -27205958 + R1_DM LINE R1 1 50 -5306 7 598 3155 9 0 0 chrUextra 1799025 1799369 -27205287 - BS LINE Jockey -1 5125 4782 7 598 3830 14 0 2 chrUextra 1799453 1799884 -27204772 + Gypsy4_I LTR Gypsy 374 803 -5485 7 598 9648 14 36 1 chrUextra 1799984 1801070 -27203586 + R2_DM LINE R2 605 1728 -1879 7 598 4612 18 0 0 chrUextra 1801170 1801679 -27202977 + DIVER_I LTR Pao 798 1306 -4337 7 598 5036 31 0 0 chrUextra 1801680 1802256 -27202400 + DIVER_I LTR Pao 1498 2073 -3570 7 598 9811 8 12 0 chrUextra 1802356 1803441 -27201215 + STALKER4_I LTR Gypsy 3644 4741 -1789 7 598 390 310 38 38 chrUextra 1804281 1804521 -27200135 + Gypsy4_I LTR Gypsy 1179 1367 -4810 7 598 526 195 0 9 chrUextra 1804726 1804840 -27199816 + XDMR_DM Unknown Unknown 248 360 0 7 598 4029 192 30 31 chrUextra 1804755 1805809 -27198847 - SAR_DM Satellite Satellite -353 1119 67 7 598 8943 13 9 45 chrUextra 1805912 1806996 -27197660 + Gypsy2_I LTR Gypsy 3284 4328 -1807 7 598 9037 15 21 23 chrUextra 1807096 1808181 -27196475 + LSU-rRNA_Dme rRNA rRNA 117 1199 -2701 7 598 4696 16 0 0 chrUextra 1808281 1808794 -27195862 - SSU-rRNA_Dme rRNA rRNA -1464 531 19 7 598 23 78 0 0 chrUextra 1808860 1808911 -27195745 + AT_rich Low_complexity Low_complexity 1 51 0 7 598 32 0 0 0 chrUextra 1808920 1808952 -27195704 + AT_rich Low_complexity Low_complexity 1 32 0 7 598 26 93 0 0 chrUextra 1809045 1809120 -27195536 + AT_rich Low_complexity Low_complexity 1 75 0 7 598 1778 56 0 9 chrUextra 1809466 1809699 -27194957 + DM297_I LTR Gypsy 4121 4351 -1816 7 598 2397 62 22 9 chrUextra 1809703 1810026 -27194630 + MDG1_I LTR Gypsy 5401 5727 -869 7 598 1791 56 0 0 chrUextra 1810028 1810277 -27194379 + MDG1_I LTR Gypsy 5956 6204 -392 7 598 627 90 54 185 chrUextra 1810253 1810513 -27194143 + MDG1_I LTR Gypsy 6371 6596 0 7 598 308 0 0 0 chrUextra 1810651 1810688 -27193968 - Copia2_LTR_DM LTR Copia -133 65 29 7 598 3885 5 5 0 chrUextra 1810688 1811109 -27193547 - Invader1_LTR LTR Gypsy 0 423 1 7 598 3837 15 37 63 chrUextra 1811117 1811606 -27193050 - MICROPIA_LTR LTR Gypsy 0 476 1 7 598 824 29 0 0 chrUextra 1811634 1811736 -27192920 - Copia2_I LTR Copia 0 4162 4061 7 598 2333 187 34 14 chrUextra 1811836 1812401 -27192255 - SAR_DM Satellite Satellite -692 780 205 7 598 352 216 29 10 chrUextra 1812317 1812420 -27192236 + ARS406_DM Unknown Unknown 1 105 -248 7 598 2100 190 17 8 chrUextra 1812445 1812918 -27191738 - SAR_DM Satellite Satellite -411 1061 585 7 598 9272 19 0 0 chrUextra 1813020 1814104 -27190552 - ZAM_I LTR Gypsy -1670 5820 4737 7 598 366 282 30 8 chrUextra 1814280 1814412 -27190244 + Invader4_I LTR Gypsy 1 135 -2278 7 598 406 327 47 71 chrUextra 1814464 1815074 -27189582 + Invader6_I LTR Gypsy 888 1477 -2999 7 598 616 318 5 0 chrUextra 1815073 1815287 -27189369 + Invader6_I LTR Gypsy 1726 1940 -2159 7 598 9478 8 52 2 chrUextra 1815388 1816472 -27188184 - G_DM LINE Jockey -878 3468 2331 7 598 6169 33 9 0 chrUextra 1816572 1817337 -27187319 + Invader2_I LTR Gypsy 2800 3571 -1021 7 598 2676 31 6 0 chrUextra 1817335 1817656 -27187000 + Invader2_I LTR Gypsy 3763 4085 -507 7 598 776 172 7 0 chrUextra 1817756 1817901 -27186755 - ARS406_DM Unknown Unknown -207 146 1 7 598 4292 187 34 29 chrUextra 1817793 1818838 -27185818 + SAR_DM Satellite Satellite 180 1230 -242 7 598 2494 103 29 52 chrUextra 1818958 1819439 -27185217 + DMSAT6 Satellite Satellite 1 470 0 7 598 2577 91 22 29 chrUextra 1819466 1820023 -27184633 + DMSAT6 Satellite Satellite 1 553 0 7 598 3949 30 93 0 chrUextra 1820715 1821208 -27183448 + PROTOP DNA P 1 539 -3941 7 598 702 36 12 0 chrUextra 1821308 1821392 -27183264 + R1_DM LINE R1 5272 5356 0 7 598 7877 51 3 5 chrUextra 1821413 1822392 -27182264 + R1_DM LINE R1 23 999 -4357 7 598 6135 25 14 0 chrUextra 1822492 1823203 -27181453 + R1_DM LINE R1 1632 2352 -3004 7 598 3146 39 16 0 chrUextra 1823191 1823575 -27181081 + R1_DM LINE R1 2635 3024 -2332 7 598 4407 0 2 0 chrUextra 1823675 1824153 -27180503 + IVK_DM LINE I 4924 5402 0 7 598 1533 40 0 0 chrUextra 1824153 1824511 -27180145 + (TTA)n Simple_repeat Simple_repeat 1 358 0 7 598 1076 81 0 9 chrUextra 1824527 1824755 -27179901 + (TTA)n Simple_repeat Simple_repeat 1 225 0 7 598 6378 163 24 0 chrUextra 1824858 1825941 -27178715 + Gypsy5_I LTR Gypsy 1869 2977 -3532 7 598 2370 41 105 0 chrUextra 1826041 1826356 -27178300 - BS3_DM LINE Jockey -673 1117 770 7 598 833 209 30 80 chrUextra 1826386 1826688 -27177968 - Gypsy12A_LTR LTR Gypsy -1169 1111 825 7 598 3146 34 104 31 chrUextra 1826700 1827124 -27177532 - Baggins1 LINE LOA -5 5448 4994 7 598 479 324 12 21 chrUextra 1827224 1827467 -27177189 + Gypsy4_I LTR Gypsy 3233 3473 -2815 7 598 267 234 71 47 chrUextra 1828041 1828126 -27176530 + Gypsy6_I LTR Gypsy 4628 4714 -2298 7 598 4580 0 0 2 chrUextra 1828407 1828917 -27175739 + DOC LINE Jockey 4217 4725 0 7 598 4872 21 73 0 chrUextra 1828917 1829490 -27175166 - R1_DM LINE R1 -1620 3736 3122 7 598 2731 201 85 54 chrUextra 1829592 1830652 -27174004 + TART LINE telomeric 6050 6653 -7824 7 598 249 209 70 0 chrUextra 1830773 1830859 -27173797 + R1_DM LINE R1 619 710 -4646 7 598 7333 93 3 7 chrUextra 1830856 1831853 -27172803 + R1_DM LINE R1 1108 2100 -3256 7 598 4382 187 13 25 chrUextra 1831953 1833033 -27171623 + SAR_DM Satellite Satellite 1 1067 -221 7 598 2713 119 75 39 chrUextra 1833147 1833705 -27170951 + STALKER4_I LTR Gypsy 597 1174 -5356 7 598 3072 3 0 0 chrUextra 1833705 1834035 -27170621 + TRANSPAC_LTR LTR Gypsy 1 330 0 7 598 1572 22 6 0 chrUextra 1834035 1834215 -27170441 + TRANSPAC_I LTR Gypsy 1 181 -4409 7 598 3894 9 0 0 chrUextra 1834315 1834751 -27169905 + FW_DM LINE Jockey 4255 4690 -2 7 74 6010 5 0 0 chrUextra 1834750 1835395 -27169261 - Invader1_I LTR Gypsy -993 2193 1549 7 599 3985 81 46 10 chrUextra 1835495 1836081 -27168575 - IDEFIX_I LTR Gypsy -1141 4487 3881 7 599 814 114 0 0 chrUextra 1836077 1836200 -27168456 - IDEFIX_I LTR Gypsy -1852 3776 3654 7 599 940 172 71 81 chrUextra 1836222 1836544 -27168112 - Gypsy_LTR LTR Gypsy -21 461 143 7 599 251 0 0 0 chrUextra 1836545 1836575 -27168081 - PROTOP_B DNA P 0 1153 1124 7 599 5315 15 2 2 chrUextra 1836675 1837276 -27167380 + R1_DM LINE R1 3708 4308 -1048 7 599 3616 65 7 4 chrUextra 1837290 1837755 -27166901 + R1_DM LINE R1 1 466 -4890 7 599 3694 211 35 16 chrUextra 1837860 1838891 -27165765 + SAR_DM Satellite Satellite 218 1267 -205 7 599 818 153 0 7 chrUextra 1838790 1838935 -27165721 - ARS406_DM Unknown Unknown -164 189 46 7 599 254 0 0 0 chrUextra 1839035 1839063 -27165593 + GTWIN_LTR LTR Gypsy 468 495 0 7 599 9917 0 0 0 chrUextra 1839063 1840115 -27164541 + GTWIN_I LTR Gypsy 1 1052 -5369 7 599 9380 7 26 0 chrUextra 1840215 1841284 -27163372 - STALKER4_I LTR Gypsy -841 5689 4593 7 599 3962 189 27 26 chrUextra 1841397 1842465 -27162191 + SAR_DM Satellite Satellite 1 1069 -203 7 599 432 75 0 0 chrUextra 1842575 1842642 -27162014 - MDG1_I LTR Gypsy -5396 1200 1134 7 599 6876 68 28 8 chrUextra 1842708 1843654 -27161002 - MDG1_I LTR Gypsy -5452 1144 181 7 599 844 263 189 19 chrUextra 1844452 1844828 -27159828 + Invader3_I LTR Gypsy 198 637 -4251 7 599 4586 42 42 4 chrUextra 1844935 1846012 -27158644 - IDEFIX_I LTR Gypsy -1090 4538 3421 7 599 2552 118 22 23 chrUextra 1846114 1847193 -27157463 - DMSAT6 Satellite Satellite -45 1078 1 7 599 5182 0 0 0 chrUextra 1847293 1847849 -27156807 - BEL_I LTR Pao -3151 2253 1698 7 599 3799 5 0 0 chrUextra 1847849 1848266 -27156390 + TIRANT_LTR LTR Gypsy 1 417 0 7 599 981 0 0 0 chrUextra 1848266 1848372 -27156284 + TIRANT_I LTR Gypsy 1 106 -7586 7 599 4207 4 0 2 chrUextra 1848472 1848934 -27155722 - FW_DM LINE Jockey -4226 466 6 7 599 28 48 0 0 chrUextra 1849217 1849259 -27155397 + AT_rich Low_complexity Low_complexity 1 42 0 7 599 2677 89 17 26 chrUextra 1849667 1850730 -27153926 - DMSAT6 Satellite Satellite 0 1053 1 7 599 3726 98 22 6 chrUextra 1850856 1851397 -27153259 - TART LINE telomeric -7194 7283 6734 7 599 368 283 127 62 chrUextra 1851425 1851736 -27152920 - TART LINE telomeric -1448 9206 8899 7 599 926 171 94 0 chrUextra 1851739 1851909 -27152747 - TART LINE telomeric -10533 3944 3759 7 599 2839 199 73 65 chrUextra 1852009 1852894 -27151762 + Gypsy12_LTR LTR Gypsy 696 1597 -683 7 599 207 0 0 0 chrUextra 1852894 1852917 -27151739 + (TAA)n Simple_repeat Simple_repeat 3 25 0 7 599 480 206 144 65 chrUextra 1852917 1853003 -27151653 + Gypsy12_LTR LTR Gypsy 1598 1678 -602 7 599 648 65 11 0 chrUextra 1852996 1853088 -27151568 - IVK_DM LINE I -2 5400 5308 7 599 10071 1 0 0 chrUextra 1853188 1854267 -27150389 + TART LINE telomeric 5743 6821 -7656 7 599 9141 28 32 1 chrUextra 1854367 1855446 -27149210 - R1_DM LINE R1 -1413 3943 2831 7 599 9395 13 32 0 chrUextra 1855548 1856625 -27148031 + Gypsy4_I LTR Gypsy 3950 5060 -1228 7 599 5302 2 38 0 chrUextra 1856725 1857804 -27146852 + DM176_I LTR Gypsy 3203 4322 -2098 7 599 2561 111 43 17 chrUextra 1859083 1860160 -27144496 + DMSAT6 Satellite Satellite 1 1105 -29 7 599 7362 62 105 24 chrUextra 1860262 1861341 -27143315 - Gypsy7_I LTR Gypsy -2301 2683 1518 7 599 686 152 88 0 chrUextra 1861477 1861602 -27143054 + Gypsy12A_LTR LTR Gypsy 2127 2262 -18 7 599 1009 226 223 55 chrUextra 1861609 1862031 -27142625 + TAHRE LINE telomeric 9807 10299 -164 7 599 330 101 102 6 chrUextra 1862083 1862155 -27142501 + TART LINE telomeric 10421 10491 -3986 7 599 1611 36 10 0 chrUextra 1862325 1862519 -27142137 + PROTOP_B DNA P 1 196 -957 7 599 9534 21 1 1 chrUextra 1862619 1863697 -27140959 - R1_DM LINE R1 -707 4649 3572 7 599 3386 16 0 0 chrUextra 1863797 1864173 -27140483 + R1_DM LINE R1 4981 5356 0 7 599 4251 57 130 3 chrUextra 1864206 1864875 -27139781 + R1_DM LINE R1 1 754 -4602 7 599 9440 23 1 0 chrUextra 1864975 1866053 -27138603 + FW_DM LINE Jockey 2227 3305 -1387 7 599 5252 19 45 3 chrUextra 1866153 1867231 -27137425 - G5_DM LINE Jockey -817 4039 2916 7 599 4378 6 0 0 chrUextra 1867331 1867821 -27136835 + QUASIMODO_I LTR Gypsy 2458 2947 -3113 7 599 2872 36 137 16 chrUextra 1867818 1868278 -27136378 + TRANSIB3 DNA Transib 791 1306 -1577 7 599 576 15 0 0 chrUextra 1868287 1868355 -27136301 + TRANSIB3 DNA Transib 2392 2459 -424 7 599 264 95 0 0 chrUextra 1868367 1868409 -27136247 + TRANSIB3 DNA Transib 2624 2665 -218 7 599 730 47 0 0 chrUextra 1868509 1868595 -27136061 + DMCR1A LINE CR1 1285 1370 -3100 7 599 5868 88 14 28 chrUextra 1868623 1869587 -27135069 - I_DM LINE I -4035 2196 1247 7 599 1013 87 9 20 chrUextra 1869695 1870745 -27133911 - RSP Satellite Satellite 0 1038 1 7 599 2047 0 0 0 chrUextra 1870865 1871087 -27133569 - ROO_I LTR Pao -8034 222 1 7 599 3979 5 0 0 chrUextra 1871087 1871515 -27133141 - ROO_LTR LTR Pao 0 428 1 7 599 719 12 0 35 chrUextra 1871515 1871601 -27133055 - NTS_DM Other Other -133 107 25 7 599 1302 18 0 12 chrUextra 1871653 1871819 -27132837 - NTS_DM Other Other -39 201 38 7 599 928 9 0 27 chrUextra 1871819 1871931 -27132725 - NTS_DM Other Other -107 133 25 7 599 2546 114 43 16 chrUextra 1872043 1873119 -27131537 + DMSAT6 Satellite Satellite 1 1105 -6 7 599 928 9 0 27 chrUextra 1873222 1873334 -27131322 - NTS_DM Other Other -107 133 25 7 599 1332 18 0 6 chrUextra 1873386 1873551 -27131105 - NTS_DM Other Other -39 201 38 7 599 928 9 0 27 chrUextra 1873551 1873663 -27130993 - NTS_DM Other Other -107 133 25 7 599 22 56 0 0 chrUextra 1873689 1873725 -27130931 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 2957 6 0 0 chrUextra 1873734 1874055 -27130601 - MAX_LTR LTR Pao 0 321 1 7 599 2241 0 0 0 chrUextra 1874055 1874298 -27130358 - MAX_I LTR Pao 0 7914 7672 7 599 25 0 0 0 chrUextra 1874492 1874517 -27130139 + AT_rich Low_complexity Low_complexity 1 25 0 7 599 4912 29 7 3 chrUextra 1874695 1875287 -27129369 - IDEFIX_LTR LTR Gypsy 0 594 1 7 599 677 109 49 38 chrUextra 1875287 1875475 -27129181 + Invader2_I LTR Gypsy 3419 3679 -913 7 599 9733 2 0 0 chrUextra 1875575 1876652 -27128004 + ROVER-I_DM LTR Gypsy 2458 3534 -3050 7 599 4524 2 0 0 chrUextra 1876752 1877232 -27127424 + SSU-rRNA_Dme rRNA rRNA 224 703 -1292 7 599 2474 8 0 0 chrUextra 1877232 1877498 -27127158 - DMLTR5 LTR Gypsy 0 266 1 7 599 3023 0 0 0 chrUextra 1877498 1877829 -27126827 - HMSBEAGLE_I LTR Gypsy 0 6529 6199 7 599 9825 0 1 0 chrUextra 1877929 1879005 -27125651 - Gypsy5_I LTR Gypsy -4693 1816 740 7 599 1336 206 131 126 chrUextra 1879306 1879862 -27124794 + HMSBEAGLE_I LTR Gypsy 5810 6368 -161 7 599 297 152 42 70 chrUextra 1880096 1880167 -27124489 + HMSBEAGLE_I LTR Gypsy 6334 6402 -127 7 599 4341 15 27 0 chrUextra 1880281 1880807 -27123849 + Invader2_I LTR Gypsy 84 623 -3969 7 599 5092 0 0 0 chrUextra 1880807 1881357 -27123299 - ACCORD_LTR LTR Gypsy 0 558 9 7 599 5349 22 23 3 chrUextra 1881457 1882533 -27122123 - STALKER4_I LTR Gypsy -2158 4372 3222 7 599 9219 23 2 0 chrUextra 1882633 1883709 -27120947 + ACCORD2_I LTR Gypsy 3325 4402 -2810 7 599 3264 29 146 0 chrUextra 1883809 1884356 -27120300 + R1_DM LINE R1 4440 5066 -290 7 599 1002 35 0 0 chrUextra 1884353 1884467 -27120189 + R1_DM LINE R1 5243 5356 0 7 599 2919 73 5 5 chrUextra 1884500 1884885 -27119771 + R1_DM LINE R1 1 385 -4971 7 599 3240 32 5 0 chrUextra 1885039 1885416 -27119240 - STALKER4_LTR LTR Gypsy -23 379 1 7 599 5755 23 0 0 chrUextra 1885416 1886061 -27118595 - DIVER_I LTR Pao -2347 3296 2652 7 599 2570 26 3 3 chrUextra 1886161 1886475 -27118181 + IDEFIX_LTR LTR Gypsy 281 594 0 7 599 25 0 0 0 chrUextra 1886645 1886670 -27117986 + AT_rich Low_complexity Low_complexity 1 25 0 7 599 1946 26 4 0 chrUextra 1887007 1887235 -27117421 + IDEFIX_I LTR Gypsy 1 229 -5399 7 599 3133 104 18 62 chrUextra 1887337 1887890 -27116766 + TART LINE telomeric 2834 3362 -11115 7 599 2319 149 12 77 chrUextra 1887884 1888413 -27116243 + TART LINE telomeric 3682 4029 -10448 7 599 238 91 22 22 chrUextra 1888513 1888558 -27116098 + PROTOP DNA P 3430 3474 -1006 7 599 795 103 145 6 chrUextra 1888596 1888762 -27115894 + PROTOP DNA P 3726 3914 -566 7 599 1016 133 139 2 chrUextra 1888770 1889165 -27115491 - DNAREP1_DM LINE Penelope -262 332 3 7 599 21 0 0 0 chrUextra 1889537 1889558 -27115098 + AT_rich Low_complexity Low_complexity 1 21 0 7 599 987 0 8 0 chrUextra 1889689 1889809 -27114847 + MAX_I LTR Pao 7794 7914 0 7 599 2731 12 0 0 chrUextra 1889809 1890130 -27114526 + MAX_LTR LTR Pao 1 321 0 7 599 4540 25 5 41 chrUextra 1890130 1890765 -27113891 + DOC2_DM LINE Jockey 746 1357 -3436 7 599 1080 7 0 81 chrUextra 1890865 1891013 -27113643 - ROO_I LTR Pao -8120 136 1 7 599 3766 0 0 0 chrUextra 1891013 1891441 -27113215 - ROO_LTR LTR Pao 0 428 1 7 599 1658 26 4 61 chrUextra 1891441 1891684 -27112972 + ALUII_DM Unknown Unknown 12 240 0 7 599 25 0 0 0 chrUextra 1892144 1892169 -27112487 + AT_rich Low_complexity Low_complexity 1 25 0 7 599 4811 36 17 0 chrUextra 1892485 1893116 -27111540 + IDEFIX_I LTR Gypsy 1 642 -4986 7 599 1593 167 19 92 chrUextra 1893243 1893666 -27110990 - Gypsy3_LTR LTR Gypsy -6 392 1 7 599 3814 22 24 138 chrUextra 1893666 1894291 -27110365 + CIRCE LINE Composite 5256 5809 -547 7 599 2302 100 22 25 chrUextra 1894392 1895466 -27109190 + DMSAT6 Satellite Satellite 1 1070 0 7 599 6780 80 19 3 chrUextra 1895566 1896591 -27108065 + IDEFIX_I LTR Gypsy 2877 3917 -1711 7 599 384 89 0 0 chrUextra 1896585 1896641 -27108015 + IDEFIX_I LTR Gypsy 4192 4247 -1381 7 599 4098 6 2 0 chrUextra 1896741 1897219 -27107437 + QUASIMODO_LTR LTR Gypsy 180 658 0 7 599 992 149 196 20 chrUextra 1897219 1897560 -27107096 - DNAREP1_DM LINE Penelope -104 490 90 7 599 1034 116 60 5 chrUextra 1897564 1897764 -27106892 - DNAREP1_DM LINE Penelope -262 332 122 7 599 245 152 0 21 chrUextra 1897769 1897816 -27106840 - Gypsy3_I LTR Gypsy -2236 3941 3901 7 599 7062 49 34 19 chrUextra 1897916 1898991 -27105665 + STALKER4_I LTR Gypsy 877 1967 -4563 7 599 4899 55 10 6 chrUextra 1899091 1899772 -27104884 - MDG1_I LTR Gypsy -512 6084 5401 7 599 2709 57 31 5 chrUextra 1899777 1900166 -27104490 - DM297_I LTR Gypsy -1816 4351 3953 7 599 390 153 0 0 chrUextra 1900267 1900339 -27104317 + ARS406_DM Unknown Unknown 45 116 -237 7 599 1115 178 26 9 chrUextra 1900340 1901100 -27103556 - SAR_DM Satellite Satellite -683 772 1 7 599 898 183 26 9 chrUextra 1901111 1901337 -27103319 - SAR_DM Satellite Satellite -683 789 560 7 599 2400 99 8 40 chrUextra 1901445 1902514 -27102142 - DMSAT6 Satellite Satellite -52 1035 1 7 599 1848 12 0 40 chrUextra 1902977 1903227 -27101429 - ALUII_DM Unknown Unknown 0 240 1 7 599 21 57 0 0 chrUextra 1903227 1903262 -27101394 + AT_rich Low_complexity Low_complexity 1 35 0 7 599 22 35 0 0 chrUextra 1903459 1903488 -27101168 + AT_rich Low_complexity Low_complexity 1 29 0 7 599 37 39 0 0 chrUextra 1903589 1903640 -27101016 + AT_rich Low_complexity Low_complexity 1 51 0 7 599 3805 78 69 0 chrUextra 1903788 1904371 -27100285 + Gypsy10_I LTR Gypsy 1196 1818 -3460 7 599 21 0 0 0 chrUextra 1904827 1904848 -27099808 + AT_rich Low_complexity Low_complexity 1 21 0 7 599 1501 353 15 11 chrUextra 1905036 1906024 -27098632 + Copia2_I LTR Copia 2592 3583 -579 7 599 2759 137 29 44 chrUextra 1906160 1906708 -27097948 + Gypsy12_LTR LTR Gypsy 1774 2313 -23 7 599 822 234 259 21 chrUextra 1906720 1907099 -27097557 + TAHRE LINE telomeric 9807 10275 -188 7 599 4013 57 147 15 chrUextra 1907310 1907985 -27096671 - TART LINE telomeric -11349 3128 2365 7 599 2135 119 124 2 chrUextra 1907980 1908383 -27096273 - TART LINE telomeric -13132 1345 894 7 599 3470 45 0 7 chrUextra 1908484 1908930 -27095726 - FW_DM LINE Jockey -4248 444 2 7 599 5170 33 17 0 chrUextra 1908914 1909556 -27095100 + R1_DM LINE R1 1376 2028 -3328 7 599 1841 74 111 25 chrUextra 1909656 1910186 -27094470 - DM297_I LTR Gypsy -382 5785 5210 7 599 4804 0 2 0 chrUextra 1910829 1911412 -27093244 - DM297_I LTR Gypsy -473 5694 5111 7 599 4227 4 0 0 chrUextra 1911399 1911902 -27092754 - DM297_I LTR Gypsy -1880 4287 3785 7 599 497 177 16 16 chrUextra 1912002 1912128 -27092528 - ARS406_DM Unknown Unknown -226 127 2 7 599 3202 224 31 13 chrUextra 1912026 1913053 -27091603 + SAR_DM Satellite Satellite 185 1230 -242 7 599 456 148 0 0 chrUextra 1912992 1913073 -27091583 - ARS406_DM Unknown Unknown -166 187 107 7 599 2582 82 22 19 chrUextra 1913175 1914248 -27090408 - DMSAT6 Satellite Satellite 0 1076 1 7 599 9044 7 1 0 chrUextra 1914348 1915421 -27089235 + HETA LINE telomeric 2386 3459 -2622 7 599 2243 31 0 24 chrUextra 1915521 1915817 -27088839 + G5_DM LINE Jockey 4568 4856 0 7 599 819 75 0 18 chrUextra 1915821 1916594 -27088062 - RSP Satellite Satellite -13 759 1 7 599 2789 188 17 11 chrUextra 1916694 1917406 -27087250 - Jockey2 LINE Jockey -1609 1819 1419 7 599 706 148 30 61 chrUextra 1917576 1917741 -27086915 - Gypsy5_LTR LTR Gypsy -194 236 77 7 599 229 125 0 24 chrUextra 1918422 1918463 -27086193 - HMSBEAGLE_I LTR Gypsy -6308 221 182 7 599 262 106 0 21 chrUextra 1918594 1918642 -27086014 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 599 336 66 65 16 chrUextra 1918664 1918726 -27085930 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 599 867 176 104 15 chrUextra 1918725 1918927 -27085729 - DMLTR5 LTR Gypsy 0 266 47 7 599 3398 5 5 7 chrUextra 1919038 1919473 -27085183 - STALKER4_I LTR Gypsy -4889 1641 1208 7 599 2445 17 3 0 chrUextra 1919473 1919770 -27084886 - Invader3_LTR LTR Gypsy 0 298 1 7 599 945 0 0 0 chrUextra 1919770 1919881 -27084775 - Invader3_I LTR Gypsy 0 4888 4778 7 599 227 31 31 0 chrUextra 1919881 1919913 -27084743 + (TTA)n Simple_repeat Simple_repeat 1 33 0 7 599 1643 0 0 5 chrUextra 1919913 1920110 -27084546 - Invader3_I LTR Gypsy -144 4744 4549 7 599 272 207 23 0 chrUextra 1920247 1920326 -27084330 + PROTOP_A DNA P 43 124 -981 7 599 21 0 0 0 chrUextra 1920421 1920442 -27084214 + AT_rich Low_complexity Low_complexity 1 21 0 7 599 579 99 0 112 chrUextra 1920527 1920652 -27084004 - DNAREP1_DM LINE Penelope -9 585 475 7 599 848 117 0 135 chrUextra 1921713 1921920 -27082736 - DIVER_LTR LTR Pao 0 224 46 7 599 4476 17 0 2 chrUextra 1921919 1922454 -27082202 - DIVER_I LTR Pao -2331 3312 2779 7 599 4456 91 9 39 chrUextra 1922558 1923626 -27081030 + HETA LINE telomeric 5524 6081 0 7 599 272 95 0 0 chrUextra 1923726 1923768 -27080888 - SAR_DM Satellite Satellite -1032 440 399 7 599 3341 186 33 13 chrUextra 1923785 1924798 -27079858 - SAR_DM Satellite Satellite -441 1032 1 7 599 359 138 92 0 chrUextra 1925776 1925841 -27078815 - G3_DM LINE Jockey -4026 579 509 7 599 2499 3 0 0 chrUextra 1926070 1926362 -27078294 + BLASTOPIA_I LTR Gypsy 4190 4481 0 7 599 2084 19 7 11 chrUextra 1926362 1926634 -27078022 + BLASTOPIA_LTR LTR Gypsy 1 271 -4 7 599 188 67 33 0 chrUextra 1926634 1926664 -27077992 + (TA)n Simple_repeat Simple_repeat 2 32 0 7 599 3508 27 0 0 chrUextra 1926680 1927122 -27077534 - MDG1_LTR LTR Gypsy 0 442 1 7 599 2173 68 0 37 chrUextra 1927242 1927565 -27077091 + CIRCE LINE Composite 2479 2789 -3567 7 599 829 76 0 0 chrUextra 1927581 1927699 -27076957 + CIRCE LINE Composite 4863 4980 -1376 7 599 378 40 0 0 chrUextra 1927887 1927937 -27076719 + G4_DM LINE Jockey 3749 3798 -58 7 599 8781 21 1 1 chrUextra 1928413 1929484 -27075172 - R1_DM LINE R1 -1469 3887 2817 7 599 2237 306 23 28 chrUextra 1929605 1930655 -27074001 - MICROPIA_I LTR Gypsy -1166 3310 2266 7 599 422 54 18 0 chrUextra 1930755 1930811 -27073845 - R1_DM LINE R1 -3983 1373 1317 7 599 8108 34 1 1 chrUextra 1930809 1931826 -27072830 - R1_DM LINE R1 -3528 1828 812 7 599 3292 7 12 12 chrUextra 1931926 1932335 -27072321 + DM1731_I LTR Copia 3568 3976 0 7 599 2730 30 0 0 chrUextra 1932335 1932671 -27071985 + DM1731_LTR LTR Copia 1 336 0 7 599 2082 16 4 0 chrUextra 1933097 1933348 -27071308 + LSU-rRNA_Dme rRNA rRNA 2330 2581 -1319 7 599 6968 10 5 2 chrUextra 1933346 1934168 -27070488 + R2_DM LINE R2 3 826 -2781 7 599 21 36 0 0 chrUextra 1934436 1934464 -27070192 + AT_rich Low_complexity Low_complexity 1 28 0 7 599 53 17 0 0 chrUextra 1934639 1934699 -27069957 + AT_rich Low_complexity Low_complexity 1 60 0 7 599 231 175 16 16 chrUextra 1935182 1935246 -27069410 + (TTA)n Simple_repeat Simple_repeat 2 65 0 7 599 220 141 46 15 chrUextra 1935475 1935540 -27069116 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 599 51 31 0 0 chrUextra 1936052 1936117 -27068539 + AT_rich Low_complexity Low_complexity 1 65 0 7 599 22 35 0 0 chrUextra 1936445 1936474 -27068182 + AT_rich Low_complexity Low_complexity 1 29 0 7 599 3552 192 30 26 chrUextra 1936611 1937670 -27066986 - SAR_DM Satellite Satellite -445 1063 1 7 599 3235 55 0 0 chrUextra 1937779 1938248 -27066408 + ZAM_I LTR Gypsy 6386 6854 -636 7 599 2239 52 10 0 chrUextra 1938247 1938555 -27066101 + ZAM_I LTR Gypsy 7176 7486 -4 7 599 525 68 0 0 chrUextra 1938573 1938647 -27066009 + ZAM_LTR LTR Gypsy 1 74 -398 7 599 513 47 0 0 chrUextra 1938649 1938713 -27065943 - DIVER2_I LTR Pao -1459 2688 2625 7 599 1061 47 113 0 chrUextra 1938699 1938849 -27065807 - DIVER2_I LTR Pao -3071 1076 910 7 599 3412 162 28 16 chrUextra 1938949 1940019 -27064637 + Gypsy10_I LTR Gypsy 3676 5287 -1001 7 599 8816 21 9 0 chrUextra 1940119 1941189 -27063467 + DMRT1A LINE R1 3543 4622 -561 7 599 4920 47 23 5 chrUextra 1941289 1941937 -27062719 - TART LINE telomeric -4034 10443 9784 7 599 2118 32 42 24 chrUextra 1941932 1942219 -27062437 - PROTOP_A DNA P -813 292 1 7 599 983 50 0 0 chrUextra 1942219 1942359 -27062297 - TART_B1 LINE telomeric -4967 5687 5548 7 599 1064 20 0 7 chrUextra 1942459 1942607 -27062049 + NTS_DM Other Other 55 201 -39 7 599 21 57 0 0 chrUextra 1942607 1942642 -27062014 + AT_rich Low_complexity Low_complexity 1 35 0 7 599 832 9 9 27 chrUextra 1942668 1942779 -27061877 + NTS_DM Other Other 25 133 -107 7 599 955 29 7 7 chrUextra 1942779 1942916 -27061740 + NTS_DM Other Other 38 174 -66 7 599 5140 3 3 0 chrUextra 1942905 1943529 -27061127 - DM297_I LTR Gypsy -4902 1265 640 7 599 8689 15 2 0 chrUextra 1943629 1944699 -27059957 - STALKER4_I LTR Gypsy -296 6234 5163 7 599 21 89 0 0 chrUextra 1945123 1945179 -27059477 + AT_rich Low_complexity Low_complexity 1 56 0 7 599 23 68 0 0 chrUextra 1945217 1945261 -27059395 + AT_rich Low_complexity Low_complexity 1 44 0 7 599 2489 41 3 0 chrUextra 1945551 1945867 -27058789 - PROTOP DNA P 0 4480 4164 7 599 7668 52 7 8 chrUextra 1946000 1947037 -27057619 + R1_DM LINE R1 1 1036 -4320 7 599 870 9 0 27 chrUextra 1947148 1947260 -27057396 + NTS_DM Other Other 25 133 -107 7 599 1222 18 0 12 chrUextra 1947260 1947426 -27057230 + NTS_DM Other Other 38 201 -39 7 599 21 57 0 0 chrUextra 1947426 1947461 -27057195 + AT_rich Low_complexity Low_complexity 1 35 0 7 599 772 10 10 29 chrUextra 1947487 1947590 -27057066 + NTS_DM Other Other 25 125 -115 7 599 2328 4 0 4 chrUextra 1947590 1947866 -27056790 - BURDOCK_LTR LTR Gypsy 0 275 1 7 599 2956 0 0 3 chrUextra 1947867 1948206 -27056450 - BURDOCK_I LTR Gypsy 0 5860 5523 7 599 782 160 96 20 chrUextra 1948306 1948504 -27056152 + ROVER-I_DM LTR Gypsy 6372 6584 0 7 599 1721 131 41 33 chrUextra 1948504 1948868 -27055788 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 599 647 195 99 71 chrUextra 1948868 1949321 -27055335 + ROVER-I_DM LTR Gypsy 1 466 -6118 7 599 853 18 0 27 chrUextra 1949494 1949606 -27055050 - NTS_DM Other Other -107 133 25 7 599 22 56 0 0 chrUextra 1949632 1949668 -27054988 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 255 125 0 0 chrUextra 1949681 1949721 -27054935 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 246 150 0 0 chrUextra 1949764 1949804 -27054852 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 246 150 0 0 chrUextra 1949856 1949896 -27054760 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 246 150 0 0 chrUextra 1949948 1949988 -27054668 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 27 29 0 0 chrUextra 1950084 1950118 -27054538 + AT_rich Low_complexity Low_complexity 1 34 0 7 599 3079 3 0 0 chrUextra 1950190 1950544 -27054112 - LSU-rRNA_Dme rRNA rRNA 0 3900 3547 7 599 22 56 0 0 chrUextra 1950753 1950789 -27053867 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 2391 166 133 18 chrUextra 1950942 1951696 -27052960 + TART LINE telomeric 8952 9726 -4751 7 599 2535 61 7 185 chrUextra 1951812 1952357 -27052299 - CIRCE LINE Composite -4936 1420 973 7 599 2778 24 147 0 chrUextra 1952499 1952880 -27051776 - CIRCE LINE Composite -5386 970 534 7 599 259 207 6 91 chrUextra 1953098 1953263 -27051393 + A-rich Low_complexity Low_complexity 1 151 0 7 599 34 24 0 0 chrUextra 1953339 1953380 -27051276 + AT_rich Low_complexity Low_complexity 1 41 0 7 599 289 200 107 0 chrUextra 1953411 1953486 -27051170 + DM297_I LTR Gypsy 400 482 -5685 7 599 1227 195 4 0 chrUextra 1953499 1953756 -27050900 + DM297_I LTR Gypsy 617 874 -5293 7 599 30 0 0 0 chrUextra 1953756 1953786 -27050870 + AT_rich Low_complexity Low_complexity 1 30 0 7 599 737 191 0 0 chrUextra 1953821 1953978 -27050678 + DM297_I LTR Gypsy 1315 1471 -4696 7 599 4591 68 2 12 chrUextra 1954148 1954790 -27049866 + R1_DM LINE R1 1609 2243 -3113 7 599 1979 67 4 0 chrUextra 1954946 1955216 -27049440 + Baggins1 LINE LOA 4791 5061 -392 7 599 2829 65 103 0 chrUextra 1955318 1955773 -27048883 + G_DM LINE Jockey 871 1372 -2974 7 599 4869 11 2 16 chrUextra 1955767 1956384 -27048272 + G_DM LINE Jockey 2076 2683 -1663 7 599 2124 180 9 23 chrUextra 1956484 1956994 -27047662 - SAR_DM Satellite Satellite -1088 502 1 7 599 2237 179 15 17 chrUextra 1957013 1957552 -27047104 - SAR_DM Satellite Satellite -396 1076 539 7 599 1583 189 92 40 chrUextra 1957652 1958010 -27046646 + DNAREP1_DM LINE Penelope 125 481 -113 7 599 190 56 27 27 chrUextra 1958010 1958047 -27046609 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 599 1583 189 92 40 chrUextra 1958047 1958135 -27046521 + DNAREP1_DM LINE Penelope 482 593 -1 7 599 418 88 44 0 chrUextra 1958836 1958904 -27045752 - DNAREP1_DM LINE Penelope -2 592 522 7 599 406 149 0 0 chrUextra 1958901 1958968 -27045688 - Gypsy_LTR LTR Gypsy -415 67 1 7 599 5965 119 21 1 chrUextra 1958968 1959888 -27044768 - Gypsy_I LTR Gypsy 0 6507 5570 7 599 1293 7 0 0 chrUextra 1959988 1960139 -27044517 - G_DM LINE Jockey -4195 151 1 7 599 246 150 0 0 chrUextra 1960212 1960252 -27044404 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 599 1731 19 0 0 chrUextra 1960327 1960543 -27044113 - G_DM LINE Jockey -726 3620 3405 7 599 4183 33 0 4 chrUextra 1960539 1961055 -27043601 - G_DM LINE Jockey -1178 3168 2655 7 599 4801 2 0 0 chrUextra 1961155 1961717 -27042939 - DOC6_DM LINE Jockey -3640 582 21 7 599 26 0 0 0 chrUextra 1961742 1961768 -27042888 + AT_rich Low_complexity Low_complexity 1 26 0 7 599 1452 158 74 95 chrUextra 1961768 1962200 -27042456 + Gypsy12A_LTR LTR Gypsy 1007 1429 -851 7 599 2122 84 2 43 chrUextra 1962322 1962783 -27041873 + DMSAT6 Satellite Satellite 14 455 -15 7 599 4796 36 2 0 chrUextra 1962780 1963387 -27041269 - DMCR1A LINE CR1 -1632 2838 2231 7 599 5175 5 2 0 chrUextra 1963489 1964094 -27040562 + IVK_DM LINE I 4796 5401 -1 7 599 2715 32 0 6 chrUextra 1964211 1964556 -27040100 - DMCR1A LINE CR1 0 4470 4128 7 599 3916 9 58 0 chrUextra 1964656 1965191 -27039465 + STALKER4_I LTR Gypsy 5963 6528 -2 7 599 2202 12 0 0 chrUextra 1965193 1965449 -27039207 + STALKER4_LTR LTR Gypsy 1 256 -146 7 599 1935 9 0 4 chrUextra 1965449 1965682 -27038974 + MICROPIA_LTR LTR Gypsy 1 232 -244 7 74 3892 36 0 0 chrUextra 1965823 1966300 -27038356 + DMCR1A LINE CR1 980 1456 -3014 7 600 4301 48 29 19 chrUextra 1966302 1966890 -27037766 - DMCR1A LINE CR1 -2223 2247 1654 7 600 2305 176 23 23 chrUextra 1966992 1968056 -27036600 - SAR_DM Satellite Satellite -670 1064 1 7 600 5447 9 0 0 chrUextra 1968156 1968803 -27035853 + PROTOP_A DNA P 459 1105 0 7 600 401 231 18 9 chrUextra 1968978 1969087 -27035569 + MICROPIA_LTR LTR Gypsy 367 476 0 7 600 226 170 0 21 chrUextra 1969174 1969222 -27035434 - Gypsy12A_LTR LTR Gypsy -244 2036 1990 7 600 4735 14 5 2 chrUextra 1969322 1969902 -27034754 + R1_DM LINE R1 3701 4282 -1074 7 600 3748 32 2 2 chrUextra 1969922 1970388 -27034268 + R1_DM LINE R1 4407 4872 -484 7 600 1485 0 0 0 chrUextra 1970488 1970659 -27033997 - ROO_I LTR Pao -8085 171 1 7 600 3752 2 0 0 chrUextra 1970659 1971087 -27033569 - ROO_LTR LTR Pao 0 428 1 7 600 4042 0 0 0 chrUextra 1971087 1971554 -27033102 + ROO_I LTR Pao 4234 4700 -3556 7 600 453 49 0 0 chrUextra 1971654 1971715 -27032941 - G5A_DM LINE Jockey -549 2292 2232 7 600 285 215 138 0 chrUextra 1971743 1971864 -27032792 + BURDOCK_I LTR Gypsy 1721 1805 -3179 7 600 864 248 42 11 chrUextra 1971858 1972143 -27032513 + BURDOCK_I LTR Gypsy 2155 2448 -3412 7 600 264 188 0 0 chrUextra 1972410 1972474 -27032182 + Gypsy8_I LTR Gypsy 230 293 -4054 7 600 1947 20 20 0 chrUextra 1972474 1972720 -27031936 + PROTOP DNA P 296 546 -3934 7 600 1185 178 32 11 chrUextra 1972821 1973100 -27031556 - SAR_DM Satellite Satellite -645 827 543 7 600 3041 192 19 13 chrUextra 1973111 1973886 -27030770 - SAR_DM Satellite Satellite -396 1076 297 7 600 7885 46 16 3 chrUextra 1973986 1975052 -27029604 - R1_DM LINE R1 -4125 1231 152 7 600 1758 10 0 0 chrUextra 1975152 1975357 -27029299 + Gypsy6_I LTR Gypsy 6808 7012 0 7 600 2326 76 32 20 chrUextra 1975359 1975775 -27028881 + Gypsy6A_LTR LTR Gypsy 1 420 0 7 600 819 63 16 16 chrUextra 1975781 1975910 -27028746 + PROTOP DNA P 3346 3474 -1006 7 600 795 103 145 6 chrUextra 1975948 1976114 -27028542 + PROTOP DNA P 3726 3914 -566 7 600 385 145 15 0 chrUextra 1976122 1976207 -27028449 - DNAREP1_DM LINE Penelope -381 213 137 7 600 1991 0 0 8 chrUextra 1976318 1976558 -27028098 + Copia_I LTR Copia 4356 4593 0 7 600 2297 0 0 0 chrUextra 1976558 1976834 -27027822 + Copia_LTR LTR Copia 1 276 0 7 600 418 18 0 0 chrUextra 1976834 1976890 -27027766 + NTS_DM Other Other 78 133 -107 7 600 1252 18 0 6 chrUextra 1976890 1977055 -27027601 + NTS_DM Other Other 38 201 -39 7 600 870 9 0 27 chrUextra 1977107 1977219 -27027437 + NTS_DM Other Other 25 133 -107 7 600 1245 18 0 6 chrUextra 1977219 1977383 -27027273 + NTS_DM Other Other 38 200 -40 7 600 2705 34 0 0 chrUextra 1977483 1977834 -27026822 - IDEFIX_LTR LTR Gypsy -243 351 1 7 600 244 125 0 0 chrUextra 1977802 1977842 -27026814 + BARI1 DNA Tc1 3 42 -1708 7 600 248 170 0 0 chrUextra 1977905 1977952 -27026704 + GTWIN_I LTR Gypsy 4931 4977 -1444 7 600 212 167 0 0 chrUextra 1978070 1978112 -27026544 + A-rich Low_complexity Low_complexity 1 42 0 7 600 272 229 110 61 chrUextra 1978199 1978362 -27026294 + MDG1_I LTR Gypsy 1304 1474 -5122 7 600 7609 56 48 1 chrUextra 1978648 1979713 -27024943 + R1_DM LINE R1 194 1308 -4048 7 600 6553 15 93 1 chrUextra 1979813 1980878 -27023778 + DOC2_DM LINE Jockey 2468 3630 -1163 7 600 334 230 68 107 chrUextra 1981009 1981962 -27022694 + ROVER-I_DM LTR Gypsy 1 916 -5668 7 600 1553 145 82 3 chrUextra 1982143 1982462 -27022194 + Invader1_I LTR Gypsy 2843 3186 0 7 600 1626 128 25 35 chrUextra 1982462 1982778 -27021878 + Invader1_LTR LTR Gypsy 1 313 -110 7 600 21 0 0 0 chrUextra 1983020 1983041 -27021615 + AT_rich Low_complexity Low_complexity 1 21 0 7 600 3097 3 0 0 chrUextra 1983308 1983664 -27020992 + QUASIMODO_LTR LTR Gypsy 303 658 0 7 600 279 73 29 106 chrUextra 1983675 1983744 -27020912 - ROVER-LTR_DM LTR Gypsy -7 403 308 7 600 499 53 0 26 chrUextra 1983772 1983849 -27020807 - ROVER-LTR_DM LTR Gypsy -256 111 37 7 600 2170 160 49 10 chrUextra 1983861 1984372 -27020284 - ROVER-I_DM LTR Gypsy -4 6580 6050 7 600 3238 5 0 0 chrUextra 1984472 1984852 -27019804 - DM176_I LTR Gypsy -840 5580 5201 7 600 5843 3 9 0 chrUextra 1984848 1985536 -27019120 - DM176_I LTR Gypsy -5167 1253 560 7 600 4068 0 2 0 chrUextra 1985636 1986105 -27018551 - SSU-rRNA_Dme rRNA rRNA -837 1158 689 7 600 2862 6 0 0 chrUextra 1986105 1986435 -27018221 - TRANSPAC_LTR LTR Gypsy 0 330 1 7 600 2038 8 4 4 chrUextra 1986434 1986699 -27017957 - TRANSPAC_I LTR Gypsy 0 4590 4326 7 600 479 122 100 0 chrUextra 1987265 1987355 -27017301 + DNAREP1_DM LINE Penelope 496 594 0 7 600 33 25 0 0 chrUextra 1987411 1987451 -27017205 + AT_rich Low_complexity Low_complexity 1 40 0 7 600 33 43 0 0 chrUextra 1987472 1987519 -27017137 + AT_rich Low_complexity Low_complexity 1 47 0 7 600 2411 100 37 19 chrUextra 1987970 1989028 -27015628 + DMSAT6 Satellite Satellite 1 1077 -6 7 600 4066 4 0 0 chrUextra 1989128 1989607 -27015049 - Copia_I LTR Copia -2287 2306 1828 7 600 5050 2 2 2 chrUextra 1989601 1990192 -27014464 - Copia_I LTR Copia -3177 1416 826 7 600 9039 2 0 0 chrUextra 1990292 1991356 -27013300 + TAHRE LINE telomeric 6734 7797 -2666 7 600 3730 193 20 21 chrUextra 1991475 1992496 -27012160 + SAR_DM Satellite Satellite 57 1076 -396 7 600 895 138 76 76 chrUextra 1992690 1992980 -27011676 - Gypsy_LTR LTR Gypsy -46 436 147 7 600 800 150 118 0 chrUextra 1993490 1993643 -27011013 + DMRT1B LINE R1 4815 4985 -198 7 600 3729 188 27 30 chrUextra 1993796 1994845 -27009811 + SAR_DM Satellite Satellite 57 1101 -371 7 600 9294 1 0 0 chrUextra 1994945 1996008 -27008648 - GTWIN_I LTR Gypsy -1368 5053 3991 7 600 4101 33 255 23 chrUextra 1996108 1996817 -27007839 + MDG1_I LTR Gypsy 5723 6596 0 7 600 383 68 17 0 chrUextra 1996833 1996892 -27007764 + (TAA)n Simple_repeat Simple_repeat 3 62 0 7 600 1757 98 11 4 chrUextra 1996904 1997171 -27007485 + MDG1_LTR LTR Gypsy 123 391 -51 7 600 2876 12 0 0 chrUextra 1997271 1997609 -27007047 + FW_DM LINE Jockey 559 896 -3796 7 600 6163 11 0 0 chrUextra 1997612 1998333 -27006323 - BS LINE Jockey 0 5126 4406 7 600 468 223 8 16 chrUextra 1998433 1998556 -27006100 + HETRP_DM Satellite Satellite 1548 1669 -203 7 600 631 186 7 28 chrUextra 1998695 1998839 -27005817 + HETRP_DM Satellite Satellite 1529 1669 -203 7 600 587 222 6 19 chrUextra 1998978 1999134 -27005522 + HETRP_DM Satellite Satellite 1529 1682 -190 7 600 643 186 7 14 chrUextra 1999255 1999397 -27005259 + HETRP_DM Satellite Satellite 1529 1669 -203 7 600 3502 2 0 0 chrUextra 1999595 2000000 -27004656 - FW_DM LINE Jockey -2439 2253 1849 7 600 5895 1 36 0 chrUextra 2000000 2000657 -27003999 - FW_DM LINE Jockey -2844 1848 1168 7 600 874 0 0 0 chrUextra 2000757 2000851 -27003805 - BEL_I LTR Pao -5310 94 1 7 600 3377 0 0 0 chrUextra 2000851 2001212 -27003444 - BEL_LTR LTR Pao 0 361 1 7 600 3774 47 3 140 chrUextra 2001212 2001819 -27002837 + CIRCE LINE Composite 1066 1587 -4769 7 600 1993 0 0 0 chrUextra 2001919 2002135 -27002521 + FW_DM LINE Jockey 2966 3181 -1511 7 600 1478 108 19 11 chrUextra 2002368 2002639 -27002017 - DMSAT6 Satellite Satellite -65 405 133 7 600 4742 11 2 2 chrUextra 2003081 2003621 -27001035 - FW_DM LINE Jockey -1578 3114 2575 7 600 4560 25 2 0 chrUextra 2003615 2004143 -27000513 - FW_DM LINE Jockey -3168 1524 996 7 600 9242 19 17 13 chrUextra 2004243 2005305 -26999351 - Gypsy6_I LTR Gypsy -1366 5646 4581 7 600 3607 136 99 48 chrUextra 2005405 2006180 -26998476 + Invader1_I LTR Gypsy 2372 3186 0 7 600 1694 116 18 31 chrUextra 2006181 2006467 -26998189 + Invader1_LTR LTR Gypsy 2 283 -140 7 600 4023 180 31 28 chrUextra 2006580 2007628 -26997028 - SAR_DM Satellite Satellite -354 1051 1 7 600 5439 121 107 23 chrUextra 2007730 2008784 -26995872 + TART LINE telomeric 8950 10092 -4385 7 600 36 23 0 0 chrUextra 2008952 2008995 -26995661 + AT_rich Low_complexity Low_complexity 1 43 0 7 600 8183 62 20 12 chrUextra 2010051 2011112 -26993544 + R1_DM LINE R1 43 1111 -4245 7 600 240 30 0 83 chrUextra 2011212 2011248 -26993408 - NTS_DM Other Other -183 57 25 7 600 1332 18 0 6 chrUextra 2011300 2011465 -26993191 - NTS_DM Other Other -39 201 38 7 600 928 9 0 27 chrUextra 2011465 2011577 -26993079 - NTS_DM Other Other -107 133 25 7 600 22 56 0 0 chrUextra 2011603 2011639 -26993017 + AT_rich Low_complexity Low_complexity 1 36 0 7 600 277 176 0 19 chrUextra 2011652 2011704 -26992952 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 600 241 163 0 58 chrUextra 2011743 2011795 -26992861 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2570 7 600 27 0 0 0 chrUextra 2011797 2011824 -26992832 + AT_rich Low_complexity Low_complexity 1 27 0 7 600 3461 0 0 3 chrUextra 2011896 2012270 -26992386 - LSU-rRNA_Dme rRNA rRNA 0 3900 3528 7 600 523 129 0 0 chrUextra 2012387 2012472 -26992184 - MICROPIA_LTR LTR Gypsy -159 317 233 7 600 25 0 0 0 chrUextra 2012831 2012856 -26991800 + AT_rich Low_complexity Low_complexity 1 25 0 7 600 220 266 0 0 chrUextra 2012867 2012931 -26991725 + T-rich Low_complexity Low_complexity 2 65 0 7 600 468 0 0 0 chrUextra 2012951 2013003 -26991653 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 600 1762 85 68 0 chrUextra 2013026 2013274 -26991382 + Gypsy9_LTR LTR Gypsy 1 265 -71 7 600 952 103 138 0 chrUextra 2013259 2013433 -26991223 + Gypsy9_I LTR Gypsy 12 209 -4468 7 600 9603 0 0 0 chrUextra 2013533 2014593 -26990063 - ACCORD_I LTR Gypsy -958 5330 4271 7 600 3137 132 11 13 chrUextra 2014693 2015215 -26989441 + TAHRE LINE telomeric 9942 10462 -1 7 600 642 14 0 0 chrUextra 2015201 2015273 -26989383 + TAHRE LINE telomeric 10380 10451 -12 7 600 1034 157 63 81 chrUextra 2015262 2015751 -26988905 + HETA LINE telomeric 1 616 -5465 7 600 2797 94 20 13 chrUextra 2015853 2016912 -26987744 + DMSAT6 Satellite Satellite 1 1066 -40 7 600 437 250 93 44 chrUextra 2017012 2017229 -26987427 - Gypsy12_LTR LTR Gypsy -440 1896 1640 7 600 736 248 36 73 chrUextra 2017247 2017577 -26987079 - Gypsy12_LTR LTR Gypsy -1187 1149 832 7 600 1141 159 14 28 chrUextra 2017670 2017884 -26986772 - Gypsy12_LTR LTR Gypsy -2125 211 1 7 600 1477 75 0 0 chrUextra 2017884 2018071 -26986585 - Gypsy12_I LTR Gypsy 0 5546 5360 7 600 1998 174 74 51 chrUextra 2018171 2018729 -26985927 + TART LINE telomeric 3620 3997 -10480 7 600 3393 107 2 20 chrUextra 2018723 2019229 -26985427 + TART LINE telomeric 6753 7249 -7228 7 600 2119 101 34 67 chrUextra 2019331 2019823 -26984833 - HETA LINE telomeric -5453 628 1 7 600 322 0 0 111 chrUextra 2019836 2019890 -26984766 - TAHRE LINE telomeric -3813 10664 10628 7 600 328 0 0 0 chrUextra 2019892 2019929 -26984727 - HETA LINE telomeric 0 6081 6045 7 600 2538 160 13 11 chrUextra 2019928 2020389 -26984267 - TAHRE LINE telomeric -12 10451 9990 7 600 2121 139 33 36 chrUextra 2020489 2020878 -26983778 - Invader1_LTR LTR Gypsy -35 388 1 7 600 240 111 0 0 chrUextra 2020928 2020973 -26983683 + (A)n Simple_repeat Simple_repeat 1 45 0 7 600 718 79 10 0 chrUextra 2020976 2021077 -26983579 + DMRT1C LINE R1 3489 3590 -1853 7 600 845 62 208 0 chrUextra 2021075 2021219 -26983437 - DOC5_DM LINE Jockey -4092 590 417 7 600 300 200 42 14 chrUextra 2021216 2021287 -26983369 + DMRT1B LINE R1 298 370 -4813 7 600 1846 55 4 34 chrUextra 2021283 2021545 -26983111 + Gypsy7_I LTR Gypsy 17 270 -4714 7 600 7266 65 29 36 chrUextra 2021648 2022707 -26981949 + TART LINE telomeric 2286 3337 -11140 7 600 2663 100 21 32 chrUextra 2022807 2023859 -26980797 + DMSAT6 Satellite Satellite 1 1039 -74 7 600 30 27 0 0 chrUextra 2024574 2024611 -26980045 + AT_rich Low_complexity Low_complexity 1 37 0 7 600 997 70 4 20 chrUextra 2025185 2026181 -26978475 - RSP Satellite Satellite 0 980 1 7 600 5800 17 21 0 chrUextra 2026281 2026939 -26977717 - FW_DM LINE Jockey -4020 672 1 7 600 3392 38 0 0 chrUextra 2026946 2027339 -26977317 + R1_DM LINE R1 1397 1789 -3567 7 600 9497 13 0 6 chrUextra 2027439 2028497 -26976159 - Gypsy2_I LTR Gypsy -4848 1287 236 7 600 3377 180 8 11 chrUextra 2028597 2029655 -26975001 - SAR_DM Satellite Satellite -664 1053 1 7 600 1669 26 0 10 chrUextra 2029755 2029949 -26974707 + PROTOP DNA P 4289 4480 0 7 600 26 30 0 0 chrUextra 2030322 2030355 -26974301 + AT_rich Low_complexity Low_complexity 1 33 0 7 600 23 68 0 0 chrUextra 2030401 2030445 -26974211 + AT_rich Low_complexity Low_complexity 1 44 0 7 600 28 79 0 0 chrUextra 2030476 2030539 -26974117 + AT_rich Low_complexity Low_complexity 1 63 0 7 600 1585 174 6 6 chrUextra 2030913 2031231 -26973425 + SAR_DM Satellite Satellite 406 723 -749 7 600 3339 193 7 7 chrUextra 2031242 2031971 -26972685 + SAR_DM Satellite Satellite 256 984 -488 7 600 940 0 0 0 chrUextra 2032071 2032172 -26972484 - BEL_I LTR Pao -5303 101 1 7 600 3294 0 11 0 chrUextra 2032172 2032529 -26972127 - BEL_LTR LTR Pao 0 361 1 7 600 523 71 0 0 chrUextra 2032529 2032599 -26972057 + QUASIMODO_I LTR Gypsy 5105 5174 -886 7 600 1740 58 16 0 chrUextra 2032589 2032846 -26971810 + QUASIMODO_I LTR Gypsy 5467 5727 -333 7 600 461 225 31 47 chrUextra 2032897 2033129 -26971527 + QUASIMODO_LTR LTR Gypsy 29 379 -279 7 600 7452 45 74 14 chrUextra 2033230 2034273 -26970383 + Baggins1 LINE LOA 4078 5182 -271 7 600 3273 110 27 72 chrUextra 2034390 2035009 -26969647 + Gypsy8_I LTR Gypsy 1035 1533 -2814 7 600 383 123 62 0 chrUextra 2035010 2035075 -26969581 - I_DM LINE I -6057 174 106 7 600 35 71 0 0 chrUextra 2035082 2035152 -26969504 + AT_rich Low_complexity Low_complexity 1 70 0 7 600 1542 75 9 27 chrUextra 2035152 2035372 -26969284 - DMCR1A LINE CR1 0 4470 4255 7 600 549 79 13 0 chrUextra 2035367 2035443 -26969213 - DMCR1A LINE CR1 -2868 1602 1526 7 600 2548 99 17 26 chrUextra 2035543 2036600 -26968056 + DMSAT6 Satellite Satellite 1 1046 -3 7 600 4240 40 8 11 chrUextra 2036721 2037254 -26967402 - BATUMI_I LTR Pao -962 7001 6471 7 600 3170 75 126 0 chrUextra 2037249 2037756 -26966900 + BATUMI_I LTR Pao 7344 7914 -49 7 600 263 91 0 0 chrUextra 2038109 2038142 -26966514 + Baggins1 LINE LOA 4727 4759 -694 7 600 784 76 248 7 chrUextra 2038147 2038292 -26966364 - FB4_DM DNA Tc1 -3907 182 3 7 600 1892 5 37 0 chrUextra 2039013 2039229 -26965427 + Gypsy4_I LTR Gypsy 3673 3896 -2392 7 600 7010 16 54 0 chrUextra 2039242 2040069 -26964587 + Gypsy4_I LTR Gypsy 3950 4821 -1467 7 600 2212 23 8 0 chrUextra 2040169 2040429 -26964227 - R1_DM LINE R1 -342 5014 4753 7 600 6101 35 26 35 chrUextra 2040430 2041225 -26963431 + R1_DM LINE R1 409 1196 -4160 7 600 5265 22 56 4 chrUextra 2041325 2042381 -26962275 + FW_DM LINE Jockey 3264 4374 -318 7 600 8153 49 21 4 chrUextra 2042481 2043537 -26961119 - IDEFIX_I LTR Gypsy -1941 3687 2614 7 600 717 209 6 19 chrUextra 2043749 2043905 -26960751 - HETRP_DM Satellite Satellite -190 1682 1529 7 600 734 184 13 26 chrUextra 2044058 2044214 -26960442 - HETRP_DM Satellite Satellite -190 1682 1529 7 600 726 209 6 19 chrUextra 2044367 2044523 -26960133 - HETRP_DM Satellite Satellite -190 1682 1529 7 600 1223 58 116 0 chrUextra 2045313 2045485 -26959171 - PROTOP_B DNA P 0 1153 962 7 600 1012 142 76 76 chrUextra 2045528 2045818 -26958838 - Gypsy_LTR LTR Gypsy -46 436 147 7 600 1128 262 47 52 chrUextra 2045958 2046380 -26958276 - Gypsy12_LTR LTR Gypsy -1725 611 192 7 600 4846 86 0 2 chrUextra 2046385 2047005 -26957651 - Gypsy12_I LTR Gypsy -27 5519 4901 7 600 9829 2 0 0 chrUextra 2047105 2048161 -26956495 + TART_B1 LINE telomeric 9354 10409 -245 7 600 904 0 0 0 chrUextra 2048261 2048371 -26956285 + Stalker2_I LTR Gypsy 7293 7402 0 7 600 3857 0 0 2 chrUextra 2048371 2048796 -26955860 + Stalker2_LTR LTR Gypsy 1 424 0 7 600 744 211 12 18 chrUextra 2048881 2049050 -26955606 + HETRP_DM Satellite Satellite 1518 1685 -187 7 600 600 185 0 9 chrUextra 2049208 2049317 -26955339 + HETRP_DM Satellite Satellite 1529 1636 -236 7 600 24 0 0 0 chrUextra 2049855 2049879 -26954777 + AT_rich Low_complexity Low_complexity 1 24 0 7 600 24 32 0 0 chrUextra 2049908 2049939 -26954717 + AT_rich Low_complexity Low_complexity 1 31 0 7 600 621 67 11 22 chrUextra 2050038 2050130 -26954526 - BS3_DM LINE Jockey 0 1790 1700 7 600 649 258 5 37 chrUextra 2050572 2050761 -26953895 + ROVER-I_DM LTR Gypsy 1890 2072 -4512 7 600 1504 219 67 6 chrUextra 2050759 2051118 -26953538 + ROVER-I_DM LTR Gypsy 2298 2678 -3906 7 600 383 303 62 62 chrUextra 2051163 2051582 -26953074 - BLASTOPIA_I LTR Gypsy -1885 2596 2178 7 600 2474 93 0 0 chrUextra 2051728 2052073 -26952583 + DMRT1C LINE R1 2678 3022 -2421 7 600 895 71 0 0 chrUextra 2052074 2052186 -26952470 + DMRT1C LINE R1 4367 4478 -965 7 600 4802 45 52 0 chrUextra 2052184 2052782 -26951874 + DMRT1C LINE R1 4659 5287 -156 7 600 4152 199 15 19 chrUextra 2052884 2053937 -26950719 + SAR_DM Satellite Satellite 167 1215 -257 7 600 5720 20 76 0 chrUextra 2054037 2055092 -26949564 - STALKER4_I LTR Gypsy -2744 3786 2652 7 600 227 274 14 14 chrUextra 2055954 2056028 -26948628 + DIVER2_I LTR Pao 1965 2038 -2109 7 600 4208 21 4 0 chrUextra 2056347 2056831 -26947825 + R1_DM LINE R1 3843 4328 -1028 7 600 4017 27 106 7 chrUextra 2056830 2057378 -26947278 + R1_DM LINE R1 4465 5066 -290 7 600 229 37 0 0 chrUextra 2057375 2057402 -26947254 + R1_DM LINE R1 5243 5269 -87 7 600 396 143 0 0 chrUextra 2057583 2057640 -26947016 - DNAREP1_DM LINE Penelope -479 115 59 7 600 2026 38 4 0 chrUextra 2057640 2057878 -26946778 + Gypsy6A_LTR LTR Gypsy 1 239 -181 7 600 244 132 0 0 chrUextra 2057877 2057915 -26946741 + Gypsy6A_LTR LTR Gypsy 371 408 -12 7 600 5422 21 2 28 chrUextra 2057915 2058557 -26946099 + Gypsy12_LTR LTR Gypsy 1 625 -1711 7 600 8721 54 0 0 chrUextra 2058657 2059712 -26944944 - IDEFIX_I LTR Gypsy -2987 2641 1587 7 600 3557 71 52 15 chrUextra 2059812 2060330 -26944326 + HETA LINE telomeric 3320 3856 -2225 7 600 4251 63 2 5 chrUextra 2060312 2060867 -26943789 + HETA LINE telomeric 691 1243 -4838 7 600 8913 28 2 9 chrUextra 2060967 2062021 -26942635 + FW_DM LINE Jockey 1120 2165 -2527 7 600 2338 300 41 47 chrUextra 2062121 2063171 -26941485 - MICROPIA_I LTR Gypsy -1897 2579 1536 7 600 7304 82 47 8 chrUextra 2063275 2064301 -26940355 - R1_DM LINE R1 -3693 1663 598 7 600 2641 90 50 15 chrUextra 2064429 2065483 -26939173 - DMSAT6 Satellite Satellite -59 1090 1 7 600 4079 189 16 20 chrUextra 2065584 2066518 -26938138 + SAR_DM Satellite Satellite 335 1264 -208 7 600 852 76 0 0 chrUextra 2066518 2066637 -26938019 - ARS406_DM Unknown Unknown -195 158 40 7 600 740 119 76 44 chrUextra 2066771 2066929 -26937727 - DNAREP1_DM LINE Penelope -415 179 17 7 600 21 0 0 0 chrUextra 2068313 2068334 -26936322 + AT_rich Low_complexity Low_complexity 1 21 0 7 600 21 0 0 0 chrUextra 2068446 2068467 -26936189 + AT_rich Low_complexity Low_complexity 1 21 0 7 600 9097 30 30 0 chrUextra 2069045 2070098 -26934558 - DIVER_I LTR Pao -130 5513 4429 7 600 8680 28 47 1 chrUextra 2070198 2071229 -26933427 - FW_DM LINE Jockey -3614 1078 1 7 600 434 83 0 0 chrUextra 2071352 2071412 -26933244 + DMRT1C LINE R1 2574 2633 -2810 7 600 2752 90 0 3 chrUextra 2071473 2071863 -26932793 + DMRT1C LINE R1 2634 3022 -2421 7 600 587 42 0 0 chrUextra 2071864 2071935 -26932721 + DMRT1C LINE R1 4367 4437 -1006 7 600 3599 52 67 0 chrUextra 2071941 2072404 -26932252 + DMRT1C LINE R1 4659 5152 -291 7 600 7483 71 26 7 chrUextra 2072504 2073531 -26931125 + QUASIMODO_I LTR Gypsy 564 1610 -4450 7 600 33 25 0 0 chrUextra 2074309 2074349 -26930307 + AT_rich Low_complexity Low_complexity 1 40 0 7 600 496 133 100 0 chrUextra 2074402 2074492 -26930164 - DNAREP1_DM LINE Penelope 0 594 496 7 600 6156 36 12 13 chrUextra 2074810 2075579 -26929077 - BATUMI_I LTR Pao -5421 2542 1775 7 600 2427 21 67 0 chrUextra 2075579 2075863 -26928793 + PROTOP_A DNA P 1 303 -802 7 600 4192 108 33 52 chrUextra 2075963 2077016 -26927640 + TART LINE telomeric 10155 10663 -3814 7 600 8473 37 27 16 chrUextra 2077116 2078165 -26926491 + CIRCE LINE Composite 2202 3261 -3095 7 600 1926 78 25 67 chrUextra 2078771 2079086 -26925570 + Gypsy6A_LTR LTR Gypsy 1 302 -118 7 600 182 91 0 29 chrUextra 2079159 2079193 -26925463 + (CCA)n Simple_repeat Simple_repeat 2 34 0 7 600 4706 41 140 16 chrUextra 2079420 2080062 -26924594 - R1_DM LINE R1 -3985 1371 650 7 600 2059 9 0 0 chrUextra 2080057 2080283 -26924373 + MICROPIA_LTR LTR Gypsy 7 232 -244 7 600 1437 12 0 0 chrUextra 2080309 2080472 -26924184 + MICROPIA_LTR LTR Gypsy 229 391 -85 7 600 8721 20 27 2 chrUextra 2080572 2081624 -26923032 - Invader2_I LTR Gypsy -2094 2498 1421 7 600 1532 101 5 0 chrUextra 2081724 2081933 -26922723 + Gypsy12_I LTR Gypsy 794 1003 -4543 7 600 467 65 0 0 chrUextra 2081922 2081984 -26922672 + Gypsy12_I LTR Gypsy 5482 5543 -3 7 600 1566 113 12 25 chrUextra 2081988 2082227 -26922429 + Gypsy12_LTR LTR Gypsy 1 236 -2100 7 600 3282 29 11 0 chrUextra 2082227 2082605 -26922051 + DIVER2_LTR LTR Pao 4 385 0 7 600 1349 65 0 0 chrUextra 2082605 2082775 -26921881 + DIVER2_I LTR Pao 1 170 -3977 7 600 1393 137 20 27 chrUextra 2082875 2083148 -26921508 - DMRT1B LINE R1 -4847 336 1 7 600 4268 201 13 18 chrUextra 2084026 2085056 -26919600 - SAR_DM Satellite Satellite -268 1204 180 7 600 832 110 0 0 chrUextra 2084950 2085077 -26919579 + ARS406_DM Unknown Unknown 1 127 -226 7 600 3079 169 39 10 chrUextra 2085177 2086228 -26918428 + SAR_DM Satellite Satellite 1 1080 -677 7 600 3735 204 28 44 chrUextra 2086361 2087366 -26917290 - TART_B1 LINE telomeric -8838 1816 828 7 600 4128 194 32 35 chrUextra 2087479 2088530 -26916126 + SAR_DM Satellite Satellite 1 1048 -203 7 600 2778 3 3 0 chrUextra 2088630 2088933 -26915723 - HMSBEAGLE_I LTR Gypsy -6225 304 1 7 600 2466 8 0 0 chrUextra 2088932 2089198 -26915458 - DMLTR5 LTR Gypsy 0 266 1 7 600 300 111 0 0 chrUextra 2089199 2089244 -26915412 + (CATA)n Simple_repeat Simple_repeat 2 46 0 7 600 2299 15 7 11 chrUextra 2089244 2089520 -26915136 - BLASTOPIA_LTR LTR Gypsy 0 275 1 7 600 1413 6 0 0 chrUextra 2089520 2089677 -26914979 - BLASTOPIA_I LTR Gypsy 0 4481 4325 7 600 2344 173 33 47 chrUextra 2089780 2090637 -26914019 - SAR_DM Satellite Satellite -699 844 1 7 600 545 189 0 0 chrUextra 2090545 2090656 -26914000 + ARS406_DM Unknown Unknown 6 116 -237 7 600 791 192 12 0 chrUextra 2090657 2090829 -26913827 - SAR_DM Satellite Satellite -683 789 616 7 600 1192 311 45 42 chrUextra 2090930 2091976 -26912680 + MDG1_I LTR Gypsy 1521 2465 -4148 7 600 1152 38 0 0 chrUextra 2092080 2092212 -26912444 + DMCR1A LINE CR1 974 1105 -3365 7 600 7799 33 26 0 chrUextra 2092214 2093130 -26911526 + DMCR1A LINE CR1 1213 2152 -2318 7 600 3750 103 105 4 chrUextra 2093231 2094273 -26910383 + Gypsy12_I LTR Gypsy 3688 4895 -651 7 600 3757 12 0 2 chrUextra 2094380 2094807 -26909849 + QUASIMODO_I LTR Gypsy 2281 2706 -3354 7 600 5343 24 18 2 chrUextra 2094802 2095430 -26909226 + QUASIMODO_I LTR Gypsy 2858 3495 -2565 7 600 4269 195 26 15 chrUextra 2095534 2096576 -26908080 + SAR_DM Satellite Satellite 212 1264 -208 7 600 3643 54 9 4 chrUextra 2096680 2097147 -26907509 + DMRT1C LINE R1 3999 4467 -976 7 9 33 85 0 0 chrUextra 2097147 2097229 -26907427 + AT_rich Low_complexity Low_complexity 1 82 0 7 601 310 73 17 83 chrUextra 2097241 2097301 -26907355 + PROTOP DNA P 1014 1069 -3411 7 601 1294 73 8 19 chrUextra 2097293 2097548 -26907108 + PROTOP DNA P 3940 4112 -368 7 601 1198 29 0 7 chrUextra 2097545 2097686 -26906970 + PROTOP DNA P 4340 4479 -1 7 601 257 231 0 0 chrUextra 2097840 2097892 -26906764 + MICROPIA_I LTR Gypsy 3799 3850 -626 7 601 22 80 0 0 chrUextra 2098615 2098665 -26905991 + AT_rich Low_complexity Low_complexity 1 50 0 7 601 4023 30 60 4 chrUextra 2098978 2099482 -26905174 - R1_DM LINE R1 -1048 4308 3777 7 601 4518 35 11 0 chrUextra 2099483 2100027 -26904629 - R1_DM LINE R1 -2243 3113 2564 7 601 2926 33 19 24 chrUextra 2100141 2100510 -26904146 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 601 193 0 61 30 chrUextra 2100510 2100543 -26904113 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 7 601 1635 217 48 13 chrUextra 2100551 2101175 -26903481 + HETA LINE telomeric 869 1593 -4488 7 601 305 138 0 33 chrUextra 2101279 2101339 -26903317 + Stalker3_LTR LTR Gypsy 315 372 0 7 601 25 0 0 0 chrUextra 2101427 2101452 -26903204 + AT_rich Low_complexity Low_complexity 1 25 0 7 601 2867 146 72 48 chrUextra 2101476 2102325 -26902331 + STALKER4_I LTR Gypsy 291 1207 -5323 7 601 9165 30 7 1 chrUextra 2102425 2103474 -26901182 - Gypsy3_I LTR Gypsy -400 5777 4723 7 601 377 0 0 0 chrUextra 2103574 2103620 -26901036 + NTS_DM Other Other 88 133 -107 7 601 1350 18 0 6 chrUextra 2103620 2103785 -26900871 + NTS_DM Other Other 38 201 -39 7 601 936 9 0 27 chrUextra 2103837 2103949 -26900707 + NTS_DM Other Other 25 133 -107 7 601 788 0 0 0 chrUextra 2103949 2104035 -26900621 + NTS_DM Other Other 38 123 -117 7 601 2466 8 0 0 chrUextra 2104035 2104301 -26900355 - DMLTR5 LTR Gypsy 0 266 1 7 601 2940 0 0 0 chrUextra 2104301 2104623 -26900033 - HMSBEAGLE_I LTR Gypsy 0 6529 6208 7 601 5389 166 15 29 chrUextra 2104723 2105772 -26898884 - HETA LINE telomeric -2377 3704 2707 7 601 3471 91 0 0 chrUextra 2105872 2106313 -26898343 - HMSBEAGLE_I LTR Gypsy -2315 4214 3774 7 601 2347 57 0 0 chrUextra 2106321 2106604 -26898052 + BATUMI_I LTR Pao 2325 2607 -5356 7 601 2003 76 30 24 chrUextra 2106624 2106921 -26897735 + BATUMI_I LTR Pao 2590 2888 -5075 7 601 21 0 0 0 chrUextra 2107413 2107434 -26897222 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 3760 9 2 0 chrUextra 2108169 2108594 -26896062 + FW_DM LINE Jockey 4267 4692 0 7 601 2810 174 24 8 chrUextra 2108596 2108763 -26895893 - SAR_DM Satellite Satellite -604 868 701 7 601 221 0 35 0 chrUextra 2108763 2108792 -26895864 + (TAA)n Simple_repeat Simple_repeat 2 31 0 7 601 2810 174 24 8 chrUextra 2108792 2109217 -26895439 - SAR_DM Satellite Satellite -772 700 268 7 601 2129 302 58 20 chrUextra 2109557 2110365 -26894291 + NINJA_I LTR Pao 2898 3736 -2275 7 601 213 39 0 0 chrUextra 2110531 2110557 -26894099 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 7 601 695 150 240 7 chrUextra 2110557 2110705 -26893951 + DNAREP1_DM LINE Penelope 22 205 -389 7 601 2127 63 7 14 chrUextra 2111613 2111903 -26892753 - R1_DM LINE R1 -5046 310 23 7 601 3522 29 156 0 chrUextra 2111924 2112661 -26891995 - R1_DM LINE R1 0 5356 4505 7 601 5682 77 6 1 chrUextra 2112761 2113542 -26891114 - IDEFIX_I LTR Gypsy -455 5173 4389 7 601 1788 260 0 2 chrUextra 2113909 2114367 -26890289 - G6_DM LINE Jockey -871 1171 715 7 601 1522 18 0 0 chrUextra 2114373 2114541 -26890115 - PROTOP_A DNA P -937 168 1 7 601 3608 19 7 0 chrUextra 2114541 2114957 -26889699 + R1_DM LINE R1 2540 2958 -2398 7 601 2934 27 0 6 chrUextra 2115057 2115398 -26889258 + R1_DM LINE R1 4931 5269 -87 7 601 4149 69 2 6 chrUextra 2115399 2115936 -26888720 + R1_DM LINE R1 77 611 -4745 7 601 1361 72 0 0 chrUextra 2115938 2116105 -26888551 + R1_DM LINE R1 1247 1413 -3943 7 601 3088 180 36 37 chrUextra 2116206 2117249 -26887407 + SAR_DM Satellite Satellite 1 1042 -666 7 601 1437 38 0 0 chrUextra 2117353 2117614 -26887042 + (TTA)n Simple_repeat Simple_repeat 1 261 0 7 601 297 168 0 87 chrUextra 2117619 2117723 -26886933 - DM412 LTR Gypsy -98 6799 6705 7 601 408 121 43 25 chrUextra 2117718 2117879 -26886777 - MDG1_I LTR Gypsy -38 6558 6395 7 601 3793 57 87 0 chrUextra 2117894 2118400 -26886256 + DM297_I LTR Gypsy 2983 3532 -2635 7 601 8907 36 6 1 chrUextra 2118500 2119547 -26885109 + R1_DM LINE R1 1010 2061 -3295 7 601 22 0 0 0 chrUextra 2120041 2120063 -26884593 + AT_rich Low_complexity Low_complexity 1 22 0 7 601 3498 5 0 3 chrUextra 2120794 2121179 -26883477 - DOC LINE Jockey -4310 415 32 7 601 5670 16 2 0 chrUextra 2121210 2121841 -26882815 + R1_DM LINE R1 3945 4576 -780 7 601 3870 197 28 34 chrUextra 2121945 2122985 -26881671 + SAR_DM Satellite Satellite 57 1090 -382 7 601 3437 196 142 19 chrUextra 2123112 2124135 -26880521 - TART LINE telomeric -4001 10476 9325 7 601 4235 189 27 24 chrUextra 2124235 2125266 -26879390 - SAR_DM Satellite Satellite -259 1213 180 7 601 759 99 0 16 chrUextra 2125158 2125281 -26879375 + ARS406_DM Unknown Unknown 1 121 -232 7 601 5179 3 0 3 chrUextra 2125381 2125959 -26878697 + DOC LINE Jockey 4144 4719 -6 7 601 552 167 83 0 chrUextra 2125957 2126077 -26878579 + DMCR1A LINE CR1 2276 2405 -2065 7 601 789 251 107 11 chrUextra 2126136 2126406 -26878250 - BS LINE Jockey -1688 3438 3143 7 601 584 185 78 24 chrUextra 2126527 2126693 -26877963 - DNAREP1_DM LINE Penelope -272 322 148 7 601 538 192 192 0 chrUextra 2126682 2126802 -26877854 + DMCR1A LINE CR1 2719 2861 -1609 7 601 4845 4 6 0 chrUextra 2127673 2128208 -26876448 + TART LINE telomeric 10126 10663 -3814 7 601 2716 28 0 27 chrUextra 2128210 2128719 -26875937 + HETRP_DM Satellite Satellite 1 495 -1284 7 601 728 179 7 14 chrUextra 2128819 2128961 -26875695 - HETRP_DM Satellite Satellite -203 1669 1529 7 601 556 199 22 30 chrUextra 2129110 2129245 -26875411 - HETRP_DM Satellite Satellite -190 1682 1549 7 601 192 40 0 0 chrUextra 2129245 2129270 -26875386 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 601 697 201 13 25 chrUextra 2129385 2129543 -26875113 - HETRP_DM Satellite Satellite -188 1684 1529 7 601 671 202 12 58 chrUextra 2129662 2129835 -26874821 - HETRP_DM Satellite Satellite -190 1682 1518 7 601 5799 2 2 0 chrUextra 2129965 2130599 -26874057 - FW_DM LINE Jockey -4057 635 1 7 601 3335 27 74 0 chrUextra 2130608 2131011 -26873645 - R1_DM LINE R1 -1066 4290 3858 7 601 5344 2 53 0 chrUextra 2131111 2132157 -26872499 - DM176_I LTR Gypsy -1400 5020 3920 7 601 1277 26 13 0 chrUextra 2132257 2132412 -26872244 - BATUMI_I LTR Pao -1380 6583 6427 7 601 2125 23 0 4 chrUextra 2132435 2132695 -26871961 + BATUMI_I LTR Pao 7303 7561 -402 7 601 640 49 0 24 chrUextra 2132695 2132778 -26871878 + BATUMI_I LTR Pao 7083 7163 -800 7 601 4421 36 0 4 chrUextra 2132779 2133302 -26871354 + G_DM LINE Jockey 2588 3108 -1238 7 601 2494 109 29 36 chrUextra 2133402 2134447 -26870209 - DMSAT6 Satellite Satellite -111 1036 1 7 601 3798 206 16 23 chrUextra 2134547 2135569 -26869087 + SAR_DM Satellite Satellite 1 1014 -216 7 601 437 186 0 20 chrUextra 2135493 2135592 -26869064 - XDMR_DM Unknown Unknown -10 350 254 7 601 345 96 19 37 chrUextra 2135905 2135959 -26868697 - Gypsy5_I LTR Gypsy -6456 53 1 7 601 1276 172 17 53 chrUextra 2136100 2136400 -26868256 - Gypsy5_LTR LTR Gypsy -141 289 1 7 601 2427 110 12 0 chrUextra 2136400 2136737 -26867919 + Invader2_I LTR Gypsy 620 960 -3632 7 601 7638 46 32 1 chrUextra 2136837 2137774 -26866882 - R1_DM LINE R1 -3753 1603 638 7 601 789 91 0 0 chrUextra 2137772 2137882 -26866774 - R1_DM LINE R1 -5188 168 59 7 601 905 22 29 29 chrUextra 2137982 2138120 -26866536 + NTS_DM Other Other 103 240 0 7 601 1880 17 17 17 chrUextra 2138120 2138360 -26866296 + NTS_DM Other Other 1 240 0 7 601 951 10 0 0 chrUextra 2138360 2138464 -26866192 + NTS_DM Other Other 1 104 -136 7 601 3072 3 0 0 chrUextra 2138464 2138794 -26865862 - TRANSPAC_LTR LTR Gypsy 0 330 1 7 601 1925 9 0 8 chrUextra 2138793 2139027 -26865629 - TRANSPAC_I LTR Gypsy 0 4590 4359 7 601 3233 146 5 14 chrUextra 2139127 2139682 -26864974 + TAHRE LINE telomeric 9912 10461 -2 7 601 1175 136 35 111 chrUextra 2139722 2140127 -26864529 + HETA LINE telomeric 1 374 -5707 7 601 3046 15 0 3 chrUextra 2140272 2140614 -26864042 - STALKER4_LTR LTR Gypsy -61 341 1 7 601 893 9 0 9 chrUextra 2140614 2140729 -26863927 - STALKER4_I LTR Gypsy 0 6530 6417 7 601 2145 35 3 37 chrUextra 2140729 2141022 -26863634 - BATUMI_I LTR Pao -679 7284 7002 7 601 2648 0 0 7 chrUextra 2141022 2141317 -26863339 - BATUMI_I LTR Pao 0 7963 7671 7 601 3344 6 3 0 chrUextra 2141417 2141782 -26862874 + Invader1_LTR LTR Gypsy 58 423 0 7 601 695 190 11 69 chrUextra 2141785 2141960 -26862696 - HETRP_DM Satellite Satellite -190 1682 1518 7 601 524 241 7 22 chrUextra 2142062 2142198 -26862458 - HETRP_DM Satellite Satellite -190 1682 1549 7 601 246 32 0 0 chrUextra 2142198 2142229 -26862427 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 601 351 225 0 12 chrUextra 2142373 2142454 -26862202 - HETRP_DM Satellite Satellite -190 1682 1603 7 601 204 186 34 0 chrUextra 2142561 2142620 -26862036 + (TAA)n Simple_repeat Simple_repeat 2 62 0 7 601 22 35 0 0 chrUextra 2142815 2142844 -26861812 + AT_rich Low_complexity Low_complexity 1 29 0 7 601 220 141 46 15 chrUextra 2143131 2143196 -26861460 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 601 10594 176 42 39 chrUextra 2143705 2145893 -26858763 - R1_DM LINE R1 -448 4908 2714 7 601 2308 128 15 37 chrUextra 2146021 2146502 -26858154 + DMSAT6 Satellite Satellite 1 470 0 7 601 2366 113 21 52 chrUextra 2146519 2147004 -26857652 + DMSAT6 Satellite Satellite 1 470 0 7 601 479 186 0 19 chrUextra 2147137 2147241 -26857415 + XDMR_DM Unknown Unknown 249 350 -10 7 601 2783 175 26 22 chrUextra 2147165 2148169 -26856487 - SAR_DM Satellite Satellite -354 1007 1 7 601 556 134 71 0 chrUextra 2148069 2148181 -26856475 + ARS406_DM Unknown Unknown 1 120 -233 7 601 1255 288 52 8 chrUextra 2148281 2148795 -26855861 + ROVER-I_DM LTR Gypsy 1158 1694 -4890 7 601 1018 244 4 29 chrUextra 2148775 2149050 -26855606 + ROVER-I_DM LTR Gypsy 1805 2072 -4512 7 601 1230 196 87 7 chrUextra 2149048 2149325 -26855331 + ROVER-I_DM LTR Gypsy 2298 2596 -3988 7 601 814 37 0 115 chrUextra 2149487 2149609 -26855047 + Baggins1 LINE LOA 5346 5453 0 7 601 3122 63 5 17 chrUextra 2150037 2150443 -26854213 + Baggins1 LINE LOA 4791 5191 -262 7 601 1891 0 9 0 chrUextra 2150572 2150787 -26853869 - Copia_I LTR Copia -4376 217 1 7 601 2405 0 4 0 chrUextra 2150787 2151062 -26853594 - Copia_LTR LTR Copia 0 276 1 7 601 234 122 0 0 chrUextra 2151062 2151108 -26853548 - PROTOP DNA P -426 4054 4009 7 601 225 37 0 0 chrUextra 2151104 2151131 -26853525 - PROTOP DNA P -2881 1599 1573 7 601 577 205 0 39 chrUextra 2151245 2151372 -26853284 + STALKER4_I LTR Gypsy 3692 3813 -2717 7 601 239 149 43 0 chrUextra 2151363 2151410 -26853246 + TABOR_I LTR Gypsy 3604 3652 -2684 7 601 949 164 33 0 chrUextra 2151430 2151613 -26853043 + I_DM LINE I 2127 2315 -3916 7 601 1310 101 24 19 chrUextra 2151973 2152186 -26852470 - DMCR1A LINE CR1 -179 4291 4078 7 601 4983 35 0 0 chrUextra 2152183 2152756 -26851900 - DMCR1A LINE CR1 -357 4113 3541 7 601 352 179 47 23 chrUextra 2153702 2153788 -26850868 + DNAREP1_DM LINE Penelope 475 562 -32 7 601 21 0 0 0 chrUextra 2153829 2153850 -26850806 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 3772 19 0 0 chrUextra 2153999 2154420 -26850236 + R1_DM LINE R1 4936 5356 0 7 601 4480 77 20 3 chrUextra 2154453 2155042 -26849614 + R1_DM LINE R1 1 599 -4757 7 601 2844 231 9 57 chrUextra 2155142 2155918 -26848738 + Gypsy12_LTR LTR Gypsy 34 772 -1564 7 601 712 217 151 20 chrUextra 2155940 2156185 -26848471 + Gypsy12_LTR LTR Gypsy 1042 1318 -1018 7 601 688 46 62 0 chrUextra 2156329 2156459 -26848197 + (TTA)n Simple_repeat Simple_repeat 3 140 0 7 601 5927 65 56 8 chrUextra 2156459 2157328 -26847328 + HMSBEAGLE_I LTR Gypsy 976 1917 -4612 7 601 1910 71 8 8 chrUextra 2157428 2157684 -26846972 + R1_DM LINE R1 54 309 -5047 7 601 6889 28 0 0 chrUextra 2157681 2158471 -26846185 + R1_DM LINE R1 1503 2292 -3064 7 601 9514 145 43 54 chrUextra 2158571 2160324 -26844332 + R1_DM LINE R1 3621 5354 -2 7 601 3152 58 5 5 chrUextra 2160359 2160757 -26843899 + R1_DM LINE R1 1 398 -4958 7 601 2925 91 0 2 chrUextra 2160857 2161253 -26843403 - Jockey2 LINE Jockey -1615 1813 1419 7 601 793 142 30 61 chrUextra 2161468 2161633 -26843023 - Gypsy5_LTR LTR Gypsy -194 236 77 7 601 627 73 0 0 chrUextra 2161637 2161719 -26842937 - Jockey2 LINE Jockey -3346 82 1 7 601 3065 176 16 0 chrUextra 2162000 2162552 -26842104 - HETA LINE telomeric -4179 1902 1342 7 601 2842 138 8 16 chrUextra 2162552 2163037 -26841619 - TAHRE LINE telomeric -9 10454 9974 7 601 3789 53 62 0 chrUextra 2163142 2163630 -26841026 - PROTOP DNA P -3962 518 1 7 601 3611 112 71 2 chrUextra 2163630 2164184 -26840472 + Invader1_I LTR Gypsy 1899 2491 -695 7 601 1825 79 0 12 chrUextra 2164284 2164529 -26840127 - DMCR1A LINE CR1 -3033 1437 1196 7 601 3945 199 21 21 chrUextra 2165446 2166467 -26838189 - SAR_DM Satellite Satellite -396 1076 57 7 601 708 221 0 7 chrUextra 2166568 2166718 -26837938 - Gypsy2_I LTR Gypsy -900 5235 5087 7 601 274 301 30 30 chrUextra 2166833 2166972 -26837684 - G2_DM LINE Jockey -2720 382 281 7 601 5629 32 0 0 chrUextra 2167710 2168359 -26836297 + DMRT1B LINE R1 3223 3871 -1312 7 601 3280 38 2 0 chrUextra 2168356 2168752 -26835904 + DMRT1B LINE R1 4436 4832 -351 7 601 6810 11 7 0 chrUextra 2168852 2169605 -26835051 + STALKER4_I LTR Gypsy 3540 4297 -2233 7 601 2565 27 0 0 chrUextra 2169602 2169894 -26834762 + STALKER4_I LTR Gypsy 4410 4701 -1829 7 601 5271 16 0 3 chrUextra 2169994 2170615 -26834041 - Invader2_I LTR Gypsy -211 4381 3763 7 601 3241 43 43 0 chrUextra 2170613 2171036 -26833620 - Invader2_I LTR Gypsy -1021 3571 3131 7 601 3740 144 78 38 chrUextra 2171136 2172177 -26832479 + TART_B1 LINE telomeric 967 2701 -7953 7 601 1731 284 16 31 chrUextra 2172290 2172861 -26831795 + FROGGER_I LTR Copia 558 1119 -958 7 601 1005 296 28 28 chrUextra 2172891 2173253 -26831403 + Copia2_I LTR Copia 1616 1977 -2185 7 601 2834 9 0 3 chrUextra 2173418 2173757 -26830899 - Invader2_I LTR Gypsy -4254 338 1 7 601 2491 0 0 0 chrUextra 2173757 2174023 -26830633 - Invader2_LTR LTR Gypsy 0 266 1 7 601 3263 49 16 0 chrUextra 2174034 2174459 -26830197 + MDG1_I LTR Gypsy 1130 1561 -5035 7 601 805 136 0 0 chrUextra 2174561 2174686 -26829970 + ARS406_DM Unknown Unknown 65 189 -164 7 601 4138 189 36 30 chrUextra 2174575 2175598 -26829058 - SAR_DM Satellite Satellite -198 1274 246 7 601 9412 11 2 0 chrUextra 2175700 2176741 -26827915 - DIVER2_I LTR Pao -2754 1393 351 7 601 8270 52 10 1 chrUextra 2176846 2177882 -26826774 + R1_DM LINE R1 300 1344 -4012 7 601 5743 29 8 104 chrUextra 2177982 2179023 -26825633 - TART LINE telomeric -363 14114 12990 7 601 5793 38 66 13 chrUextra 2179123 2179879 -26824777 - ROO_I LTR Pao -3268 4988 4193 7 601 2402 22 4 0 chrUextra 2179886 2180163 -26824493 + FW_DM LINE Jockey 1748 2025 -2667 7 601 412 255 119 94 chrUextra 2180388 2180674 -26823982 + Invader1_LTR LTR Gypsy 84 376 -47 7 601 338 85 689 15 chrUextra 2181169 2181301 -26823355 - HMSBEAGLE_I LTR Gypsy -6308 221 1 7 601 1018 60 6 17 chrUextra 2181405 2182446 -26822210 + RSP Satellite Satellite 1 1029 0 7 601 9198 0 0 1 chrUextra 2182546 2183586 -26821070 - TAHRE LINE telomeric -2020 8443 7405 7 601 2270 181 4 27 chrUextra 2183686 2184173 -26820483 + SAR_DM Satellite Satellite 615 1090 -382 7 601 2184 42 3 30 chrUextra 2184174 2184467 -26820189 - BATUMI_I LTR Pao -677 7286 7002 7 601 1191 60 16 52 chrUextra 2184467 2184659 -26819997 - BATUMI_I LTR Pao 0 7963 7779 7 601 838 18 9 26 chrUextra 2184612 2184726 -26819930 + BATUMI_I LTR Pao 6592 6703 -1260 7 601 4122 29 6 2 chrUextra 2184826 2185317 -26819339 - R1_DM LINE R1 -1560 3796 3304 7 601 3330 35 15 0 chrUextra 2185317 2185723 -26818933 - R1_DM LINE R1 -2310 3046 2635 7 601 1191 45 19 0 chrUextra 2185711 2185866 -26818790 - R1_DM LINE R1 -3004 2352 2195 7 601 2412 191 47 6 chrUextra 2185972 2187005 -26817651 - SAR_DM Satellite Satellite -535 1075 1 7 601 4859 8 0 0 chrUextra 2187106 2187637 -26817019 + QUASIMODO_LTR LTR Gypsy 128 658 0 7 601 3436 70 28 24 chrUextra 2187650 2188146 -26816510 - IDEFIX_I LTR Gypsy -1474 4154 3657 7 601 8880 29 7 0 chrUextra 2188246 2189286 -26815370 - NINJA_I LTR Pao -2647 3364 2318 7 601 21 0 0 0 chrUextra 2189734 2189755 -26814901 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 2633 32 0 22 chrUextra 2189780 2190103 -26814553 + NINJA_LTR LTR Pao 1 316 -1 7 601 2237 49 6 16 chrUextra 2190104 2190415 -26814241 + NINJA_I LTR Pao 1 308 -5703 7 601 8996 2 1 35 chrUextra 2190526 2191566 -26813090 - Invader3_I LTR Gypsy -2607 2281 1277 7 601 2696 132 4 18 chrUextra 2191667 2192121 -26812535 + TAHRE LINE telomeric 10011 10458 -5 7 601 1420 175 74 56 chrUextra 2192132 2192703 -26811953 + HETA LINE telomeric 1 613 -5468 7 601 560 301 53 43 chrUextra 2192805 2193104 -26811552 - HMSBEAGLE_I LTR Gypsy -3638 2891 2590 7 601 477 319 15 5 chrUextra 2193646 2193841 -26810815 - HMSBEAGLE_I LTR Gypsy -4398 2131 1935 7 601 8039 24 12 5 chrUextra 2193944 2194911 -26809745 - DM176_I LTR Gypsy -5446 974 1 7 601 655 0 0 0 chrUextra 2194911 2194983 -26809673 - DM176_LTR LTR Gypsy 0 507 436 7 601 5983 29 40 0 chrUextra 2195083 2196122 -26808534 - R1_DM LINE R1 -1561 3795 2716 7 601 3174 164 339 17 chrUextra 2196222 2197256 -26807400 - TART LINE telomeric -4899 9578 8213 7 601 5660 99 31 65 chrUextra 2197361 2198373 -26806283 + PROTOP_B DNA P 177 1153 0 7 601 2641 113 26 22 chrUextra 2198500 2199539 -26805117 + DMSAT6 Satellite Satellite 1 1043 -82 7 601 1478 63 380 0 chrUextra 2199639 2199873 -26804783 - DMCR1A LINE CR1 -2036 2434 2112 7 601 6165 51 45 25 chrUextra 2199870 2200677 -26803979 - DMCR1A LINE CR1 -2461 2009 1187 7 601 250 24 0 180 chrUextra 2200778 2200828 -26803828 - Gypsy7_I LTR Gypsy -4943 41 1 7 601 1896 76 0 12 chrUextra 2200828 2201081 -26803575 - Gypsy7_LTR LTR Gypsy 0 251 2 7 601 936 28 0 0 chrUextra 2201081 2201187 -26803469 - Gypsy7_I LTR Gypsy 0 4984 4879 7 601 778 79 0 45 chrUextra 2201282 2201414 -26803242 - Gypsy7_I LTR Gypsy -109 4875 4750 7 601 2965 70 71 5 chrUextra 2201393 2201816 -26802840 - Gypsy7_I LTR Gypsy -1411 4449 3999 7 601 1500 246 106 75 chrUextra 2202024 2202654 -26802002 + TIRANT_I LTR Gypsy 755 1398 -6294 7 601 718 191 0 0 chrUextra 2202820 2202946 -26801710 + TIRANT_I LTR Gypsy 1394 1519 -6173 7 601 1130 16 0 8 chrUextra 2203056 2203186 -26801470 + Invader2_LTR LTR Gypsy 138 266 0 7 601 3089 24 0 0 chrUextra 2203186 2203561 -26801095 + Invader2_I LTR Gypsy 1 375 -4217 7 601 4885 4 0 0 chrUextra 2203559 2204095 -26800561 + Invader2_I LTR Gypsy 623 1158 -3434 7 601 5135 32 121 1 chrUextra 2204573 2205233 -26799423 + PROTOP_B DNA P 1 736 -417 7 601 521 111 0 0 chrUextra 2205333 2205405 -26799251 + ARS406_DM Unknown Unknown 118 189 -164 7 601 4180 190 23 34 chrUextra 2205342 2206366 -26798290 - SAR_DM Satellite Satellite -242 1230 218 7 601 5833 10 64 0 chrUextra 2206471 2207175 -26797481 + STALKER4_I LTR Gypsy 3260 4008 -2522 7 601 2919 9 3 0 chrUextra 2207179 2207509 -26797147 + STALKER4_I LTR Gypsy 4593 4923 -1607 7 601 27 29 0 0 chrUextra 2207803 2207837 -26796819 + AT_rich Low_complexity Low_complexity 1 34 0 7 601 23 50 0 48 chrUextra 2208361 2208424 -26796232 + AT_rich Low_complexity Low_complexity 1 60 0 7 601 9409 12 3 1 chrUextra 2208747 2209785 -26794871 - R2_DM LINE R2 -502 3105 2066 7 601 8289 24 77 0 chrUextra 2209885 2210923 -26793733 + R1_DM LINE R1 3865 4982 -374 7 601 1174 137 30 22 chrUextra 2211069 2211300 -26793356 + NTS_DM Other Other 8 240 0 7 601 239 167 21 0 chrUextra 2211300 2211348 -26793308 + NTS_DM Other Other 1 49 -191 7 601 268 171 45 68 chrUextra 2211351 2211439 -26793217 + NTS_DM Other Other 155 240 0 7 601 1015 130 67 10 chrUextra 2211439 2211633 -26793023 + NTS_DM Other Other 1 205 -35 7 601 296 125 21 0 chrUextra 2211664 2211712 -26792944 + NTS_DM Other Other 1 49 -191 7 601 1101 142 35 22 chrUextra 2211810 2212040 -26792616 + NTS_DM Other Other 8 240 0 7 601 6672 4 0 0 chrUextra 2212161 2212909 -26791747 - DM176_I LTR Gypsy -1376 5044 4297 7 601 2675 3 0 0 chrUextra 2212907 2213199 -26791457 - DM176_I LTR Gypsy -2741 3679 3388 7 601 2906 12 0 0 chrUextra 2213299 2213618 -26791038 - PROTOP DNA P -3 4477 4159 7 601 5257 30 95 6 chrUextra 2213629 2214337 -26790319 - PROTOP DNA P -3394 1086 316 7 601 244 269 25 13 chrUextra 2214438 2214517 -26790139 - Invader4_I LTR Gypsy -551 1862 1783 7 601 676 351 33 41 chrUextra 2214933 2215474 -26789182 - Invader6_I LTR Gypsy -1504 2595 2059 7 601 467 55 0 0 chrUextra 2216711 2216766 -26787890 - R1_DM LINE R1 -4055 1301 1247 7 601 4767 64 3 3 chrUextra 2216768 2217379 -26787277 - R1_DM LINE R1 -4745 611 1 7 601 1004 35 0 0 chrUextra 2217412 2217526 -26787130 - R1_DM LINE R1 0 5356 5243 7 601 1958 9 4 4 chrUextra 2217523 2217748 -26786908 - R1_DM LINE R1 -290 5066 4842 7 601 864 20 0 10 chrUextra 2217848 2217948 -26786708 - PROTOP DNA P -4382 98 1 7 601 880 291 88 32 chrUextra 2218261 2218787 -26785869 - TV1I LTR Gypsy -5127 933 379 7 601 9140 17 15 0 chrUextra 2218985 2220022 -26784634 + ROO_I LTR Pao 1504 2556 -5700 7 601 2593 101 22 16 chrUextra 2220138 2221136 -26783520 - DMSAT6 Satellite Satellite 0 1004 1 7 601 332 137 173 27 chrUextra 2221262 2221337 -26783319 - Gypsy8_I LTR Gypsy -3330 1017 932 7 601 1492 88 15 0 chrUextra 2221326 2221530 -26783126 - Gypsy8_I LTR Gypsy -3867 480 274 7 601 2423 88 8 53 chrUextra 2221498 2222296 -26782360 + DMSAT6 Satellite Satellite 1 761 -44 7 601 282 24 0 0 chrUextra 2222396 2222437 -26782219 - QUASIMODO_I LTR Gypsy -996 5064 5024 7 601 1772 0 5 0 chrUextra 2222437 2222634 -26782022 - Copia2_LTR_DM LTR Copia 0 198 1 7 601 2162 16 0 0 chrUextra 2222634 2222892 -26781764 - Copia2_I LTR Copia 0 4162 3905 7 601 4888 13 6 2 chrUextra 2222884 2223432 -26781224 - Copia2_I LTR Copia -1572 2590 2041 7 601 3245 41 115 0 chrUextra 2223979 2224567 -26780089 + PROTOP_B DNA P 1 653 -500 7 601 881 144 118 0 chrUextra 2225093 2225246 -26779410 + DMRT1B LINE R1 4815 4985 -198 7 601 675 130 28 0 chrUextra 2225370 2225478 -26779178 + DMRT1B LINE R1 5055 5165 -18 7 601 27 29 0 0 chrUextra 2226042 2226076 -26778580 + AT_rich Low_complexity Low_complexity 1 34 0 7 601 35 63 0 0 chrUextra 2226601 2226664 -26777992 + AT_rich Low_complexity Low_complexity 1 63 0 7 601 2295 120 5 33 chrUextra 2226940 2227389 -26777267 - DMSAT6 Satellite Satellite -30 440 5 7 601 2410 108 9 41 chrUextra 2227415 2227975 -26776681 - DMSAT6 Satellite Satellite -3 541 1 7 75 2542 83 21 43 chrUextra 2228076 2228607 -26776049 + DMSAT6 Satellite Satellite 1 518 -130 7 602 2350 107 17 38 chrUextra 2228628 2229104 -26775552 + DMSAT6 Satellite Satellite 5 470 0 7 602 4801 4 2 0 chrUextra 2229212 2229733 -26774923 + Gypsy6_I LTR Gypsy 6489 7010 -2 7 602 3720 17 0 0 chrUextra 2229736 2230143 -26774513 + Gypsy6_LTR LTR Gypsy 1 407 0 7 602 956 0 9 0 chrUextra 2230143 2230248 -26774408 + SSU-rRNA_Dme rRNA rRNA 1822 1927 -68 7 602 2021 79 4 0 chrUextra 2230516 2230781 -26773875 + Baggins1 LINE LOA 4762 5027 -426 7 602 30 27 0 0 chrUextra 2231840 2231877 -26772779 + AT_rich Low_complexity Low_complexity 1 37 0 7 602 1965 189 192 38 chrUextra 2231887 2232518 -26772138 - HETA LINE telomeric -171 5910 5183 7 602 2763 68 13 35 chrUextra 2232620 2233015 -26771641 - Gypsy10_I LTR Gypsy -4892 386 1 7 602 1458 85 15 5 chrUextra 2233015 2233215 -26771441 - Gypsy10_LTR LTR Gypsy 0 364 163 7 602 23 54 0 0 chrUextra 2233756 2233793 -26770863 + AT_rich Low_complexity Low_complexity 1 37 0 7 602 21 0 0 0 chrUextra 2234201 2234222 -26770434 + AT_rich Low_complexity Low_complexity 1 21 0 7 602 42 57 0 0 chrUextra 2234361 2234431 -26770225 + AT_rich Low_complexity Low_complexity 1 70 0 7 602 395 153 203 79 chrUextra 2234549 2234726 -26769930 + DNAREP1_DM LINE Penelope 16 214 -380 7 602 391 167 39 0 chrUextra 2234710 2234788 -26769868 - DNAREP1_DM LINE Penelope -377 217 137 7 602 5891 0 0 0 chrUextra 2234891 2235522 -26769134 - DOC LINE Jockey -4065 660 30 7 602 3743 5 0 0 chrUextra 2235519 2235926 -26768730 - LSU-rRNA_Dme rRNA rRNA -1352 2548 2142 7 602 4415 12 0 0 chrUextra 2236026 2236516 -26768140 - R1_DM LINE R1 -3247 2109 1620 7 602 821 84 0 0 chrUextra 2236516 2236623 -26768033 - R1_DM LINE R1 -4515 841 735 7 602 3501 53 2 5 chrUextra 2236622 2237061 -26767595 - R1_DM LINE R1 -4745 611 174 7 602 3833 29 0 7 chrUextra 2237161 2237618 -26767038 - STALKER4_I LTR Gypsy -1443 5087 4634 7 602 2173 38 98 27 chrUextra 2237618 2237913 -26766743 - NINJA_LTR LTR Pao -1 316 1 7 602 2458 21 0 0 chrUextra 2237913 2238196 -26766460 - NINJA_I LTR Pao 0 6011 5729 7 602 983 125 113 5 chrUextra 2238525 2238710 -26765946 + DNAREP1_DM LINE Penelope 1 205 -389 7 602 23 0 0 0 chrUextra 2238768 2238791 -26765865 + AT_rich Low_complexity Low_complexity 1 23 0 7 602 2435 101 3 6 chrUextra 2238951 2239299 -26765357 - Gypsy12A_LTR LTR Gypsy 0 2280 1934 7 602 2733 212 55 12 chrUextra 2239431 2240465 -26764191 - SAR_DM Satellite Satellite -1054 1078 1 7 602 9411 1 13 0 chrUextra 2240566 2241601 -26763055 - G2_DM LINE Jockey -8 3094 2047 7 602 4838 9 0 0 chrUextra 2241701 2242237 -26762419 + FW_DM LINE Jockey 4155 4690 -2 7 602 4322 22 0 0 chrUextra 2242236 2242736 -26761920 - STALKER4_I LTR Gypsy -3765 2765 2266 7 602 9011 19 2 1 chrUextra 2242836 2243870 -26760786 - Gypsy4_I LTR Gypsy -1067 5221 4187 7 602 1571 0 0 0 chrUextra 2243970 2244140 -26760516 + Copia_I LTR Copia 4424 4593 0 7 602 2368 7 4 0 chrUextra 2244140 2244415 -26760241 + Copia_LTR LTR Copia 1 276 0 7 602 245 0 0 0 chrUextra 2244415 2244449 -26760207 + Copia_LTR LTR Copia 243 276 0 7 602 2192 195 75 35 chrUextra 2244449 2244997 -26759659 + Stalker2_I LTR Gypsy 5079 5649 -1753 7 602 916 97 5 19 chrUextra 2245173 2245759 -26758897 + RSP Satellite Satellite 1 578 0 7 602 897 81 0 14 chrUextra 2245798 2246079 -26758577 + RSP Satellite Satellite 1 277 -1 7 602 26 30 0 0 chrUextra 2246626 2246659 -26757997 + AT_rich Low_complexity Low_complexity 1 33 0 7 602 21 89 0 0 chrUextra 2246796 2246852 -26757804 + AT_rich Low_complexity Low_complexity 1 56 0 7 602 2678 204 54 10 chrUextra 2247372 2248405 -26756251 - SAR_DM Satellite Satellite -641 1078 1 7 602 5479 200 6 0 chrUextra 2248506 2249538 -26755118 + ROVER-I_DM LTR Gypsy 2729 3766 -2818 7 602 3642 185 32 59 chrUextra 2249654 2250624 -26754032 + SAR_DM Satellite Satellite 326 1269 -203 7 602 1094 66 13 0 chrUextra 2250521 2250672 -26753984 - ARS406_DM Unknown Unknown -164 189 37 7 602 5437 10 0 0 chrUextra 2250772 2251396 -26753260 - STALKER4_I LTR Gypsy -3182 3348 2725 7 602 1114 108 9 106 chrUextra 2251395 2251622 -26753034 + DIVER_LTR LTR Pao 20 224 0 7 602 1133 47 6 75 chrUextra 2251643 2251804 -26752852 + DIVER_I LTR Pao 1 150 -5493 7 602 5970 52 19 66 chrUextra 2251933 2252871 -26751785 + BATUMI_I LTR Pao 603 1496 -6467 7 602 614 0 0 0 chrUextra 2252868 2252938 -26751718 + G6_DM LINE Jockey 1855 1924 -118 7 602 2457 73 0 0 chrUextra 2253488 2253804 -26750852 - PROTOP DNA P -1549 2931 2616 7 602 458 125 0 0 chrUextra 2254007 2254071 -26750585 - ACCORD2_LTR LTR Gypsy 0 215 152 7 602 34 24 0 0 chrUextra 2255039 2255080 -26749576 + AT_rich Low_complexity Low_complexity 1 41 0 7 602 581 115 80 0 chrUextra 2255091 2255204 -26749452 - TART LINE telomeric -3986 10491 10370 7 602 26 0 0 0 chrUextra 2255412 2255438 -26749218 + AT_rich Low_complexity Low_complexity 1 26 0 7 602 1454 98 32 14 chrUextra 2255438 2255655 -26749001 - PROTOP DNA P -4258 222 1 7 602 5552 49 10 3 chrUextra 2255655 2256336 -26748320 - DOC3_DM LINE Jockey -1072 3668 2983 7 602 9440 14 0 0 chrUextra 2256437 2257470 -26747186 - R2_DM LINE R2 -979 2628 1596 7 602 922 179 46 7 chrUextra 2257731 2257960 -26746696 + DOC4_DM LINE Jockey 1735 2056 -2636 7 602 384 246 65 34 chrUextra 2257960 2258180 -26746476 + FW3_DM LINE Jockey 1526 1622 -1510 7 602 324 295 75 66 chrUextra 2258217 2258602 -26746054 + DOC4_DM LINE Jockey 2886 3329 -1411 7 602 3425 24 86 2 chrUextra 2258703 2259287 -26745369 - Gypsy2_I LTR Gypsy -1302 4833 4201 7 602 928 286 65 28 chrUextra 2259250 2259735 -26744921 + DM412 LTR Gypsy 2708 3271 -3626 7 602 7180 81 29 13 chrUextra 2259835 2260867 -26743789 + QUASIMODO_I LTR Gypsy 275 1323 -4737 7 602 8830 25 12 0 chrUextra 2260986 2261999 -26742657 - R1_DM LINE R1 -2588 2768 1744 7 602 3932 196 19 31 chrUextra 2262099 2263130 -26741526 + SAR_DM Satellite Satellite 1 1018 -203 7 602 2940 26 0 11 chrUextra 2263231 2263583 -26741073 - BATUMI_I LTR Pao -4707 3256 2909 7 602 5380 39 26 18 chrUextra 2263581 2264263 -26740393 - BATUMI_I LTR Pao -5715 2248 1561 7 602 523 28 14 0 chrUextra 2265495 2265566 -26739090 - G2_DM LINE Jockey -31 3071 3000 7 602 3424 42 12 5 chrUextra 2265562 2265994 -26738662 - G2_DM LINE Jockey -211 2891 2457 7 602 4396 45 21 0 chrUextra 2265993 2266525 -26738131 - G2_DM LINE Jockey -1090 2012 1470 7 602 7804 92 13 1 chrUextra 2266626 2267657 -26736999 - Gypsy12_I LTR Gypsy -737 4809 3767 7 602 715 324 26 26 chrUextra 2268353 2268695 -26735961 + DIVER2_I LTR Pao 3018 3359 -788 7 602 2172 35 27 4 chrUextra 2268888 2269147 -26735509 + DOC3_DM LINE Jockey 2283 2547 -2193 7 602 1639 35 211 4 chrUextra 2269149 2269377 -26735279 + DOC3_DM LINE Jockey 2667 2941 -1799 7 602 4758 27 6 0 chrUextra 2269371 2269919 -26734737 + DOC3_DM LINE Jockey 3298 3848 -892 7 602 1809 0 0 0 chrUextra 2270031 2270229 -26734427 + Copia2_LTR_DM LTR Copia 1 198 0 7 602 1041 80 33 0 chrUextra 2270229 2270379 -26734277 + QUASIMODO_I LTR Gypsy 5024 5178 -882 7 602 592 59 47 0 chrUextra 2270377 2270462 -26734194 + QUASIMODO_I LTR Gypsy 5479 5567 -493 7 602 5437 10 0 2 chrUextra 2270456 2271050 -26733606 + Copia2_I LTR Copia 1710 2302 -1860 7 602 617 148 40 16 chrUextra 2271155 2271279 -26733377 - DMTOM1_LTR LTR Gypsy 0 410 284 7 602 279 191 59 0 chrUextra 2271296 2271364 -26733292 - DM176_LTR LTR Gypsy -141 366 295 7 602 257 228 11 151 chrUextra 2271472 2271565 -26733091 - DM176_LTR LTR Gypsy -238 269 190 7 602 842 130 36 0 chrUextra 2271621 2271759 -26732897 - DM176_I LTR Gypsy 0 6420 6278 7 602 1129 146 0 0 chrUextra 2271758 2271950 -26732706 - DM297_I LTR Gypsy -486 5681 5490 7 602 1090 164 0 4 chrUextra 2271948 2272175 -26732481 - DM297_I LTR Gypsy -1433 4734 4509 7 602 2622 24 9 0 chrUextra 2272699 2273028 -26731628 - TC1-2_DM DNA Tc1 0 1644 1313 7 602 9048 8 0 10 chrUextra 2273412 2274443 -26730213 + DMRT1B LINE R1 871 1891 -3292 7 602 5942 21 8 1 chrUextra 2274543 2275574 -26729082 - Copia_I LTR Copia -1647 2946 1809 7 602 227 0 0 0 chrUextra 2275674 2275701 -26728955 + Copia2_I LTR Copia 4136 4162 0 7 602 1781 5 0 0 chrUextra 2275701 2275899 -26728757 + Copia2_LTR_DM LTR Copia 1 198 0 7 602 1473 17 0 0 chrUextra 2275899 2276071 -26728585 + (TTA)n Simple_repeat Simple_repeat 2 173 0 7 602 5672 111 10 22 chrUextra 2276805 2277835 -26726821 + Gypsy12_I LTR Gypsy 358 1432 -4114 7 602 25 51 0 0 chrUextra 2278390 2278429 -26726227 + AT_rich Low_complexity Low_complexity 1 39 0 7 602 1094 139 64 5 chrUextra 2278470 2278673 -26725983 - DNAREP1_DM LINE Penelope -358 236 22 7 602 2608 88 5 31 chrUextra 2279065 2279489 -26725167 - HETA LINE telomeric -3791 2290 1878 7 602 252 100 0 0 chrUextra 2279487 2279527 -26725129 - HETA LINE telomeric -5220 861 822 7 602 1512 185 18 80 chrUextra 2279525 2280037 -26724619 - TAHRE LINE telomeric -9966 497 18 7 602 569 312 17 61 chrUextra 2280229 2280526 -26724130 - Gypsy8_I LTR Gypsy -1905 2442 2159 7 602 547 330 18 7 chrUextra 2280801 2281082 -26723574 - OSVALDO_I LTR Gypsy -5862 791 508 7 602 736 36 143 0 chrUextra 2281327 2281439 -26723217 + DNAREP1_DM LINE Penelope 467 594 0 7 602 30 0 0 0 chrUextra 2281695 2281725 -26722931 + AT_rich Low_complexity Low_complexity 1 30 0 7 602 3294 42 2 18 chrUextra 2282455 2282897 -26721759 - DOC3_DM LINE Jockey -4137 603 169 7 602 8042 30 6 3 chrUextra 2283585 2284615 -26720041 - STALKER4_I LTR Gypsy -816 5714 4682 7 602 4792 41 26 3 chrUextra 2284724 2285745 -26718911 - TART LINE telomeric -5566 8911 8328 7 602 729 192 85 96 chrUextra 2285845 2286138 -26718518 + TIRANT_LTR LTR Gypsy 20 309 -108 7 602 528 218 16 8 chrUextra 2287061 2287186 -26717470 + Gypsy_I LTR Gypsy 6094 6219 -288 7 602 975 207 112 37 chrUextra 2287188 2287564 -26717092 + Gypsy_LTR LTR Gypsy 33 436 -46 7 602 229 220 0 0 chrUextra 2287717 2287776 -26716880 + TIRANT_I LTR Gypsy 6974 7032 -660 7 602 3496 187 21 26 chrUextra 2288113 2289135 -26715521 - SAR_DM Satellite Satellite -435 1017 1 7 602 667 182 23 52 chrUextra 2289235 2289409 -26715247 - TART LINE telomeric -10091 563 395 7 602 1620 108 241 29 chrUextra 2289380 2289724 -26714932 - TART LINE telomeric -10448 4029 3613 7 602 1459 95 0 28 chrUextra 2289728 2289977 -26714679 - TART LINE telomeric -6448 8029 7788 7 602 3600 200 15 25 chrUextra 2290365 2291395 -26713261 - SAR_DM Satellite Satellite -1035 1019 1 7 602 314 151 0 0 chrUextra 2291495 2291548 -26713108 + Gypsy3_I LTR Gypsy 6125 6177 0 7 602 1950 118 59 57 chrUextra 2291548 2291954 -26712702 + Gypsy6_LTR LTR Gypsy 1 407 0 7 602 529 194 0 59 chrUextra 2292365 2292518 -26712138 - Gypsy8_I LTR Gypsy -4123 224 81 7 602 3822 78 65 4 chrUextra 2292672 2293282 -26711374 + TRANSIB2 DNA Transib 1810 2844 0 7 602 2562 105 0 0 chrUextra 2293283 2293654 -26711002 - DMRT1B LINE R1 -1287 3896 3526 7 602 3045 45 83 9 chrUextra 2294883 2295330 -26709326 + QUASIMODO_I LTR Gypsy 4549 5028 -1032 7 602 1685 5 0 0 chrUextra 2295330 2295528 -26709128 + Copia2_LTR_DM LTR Copia 1 198 0 7 602 3176 13 3 0 chrUextra 2295528 2295912 -26708744 + Copia2_I LTR Copia 1 385 -3777 7 602 3318 22 0 0 chrUextra 2296012 2296413 -26708243 + R1_DM LINE R1 4956 5356 0 7 602 4205 64 49 3 chrUextra 2296446 2297040 -26707616 + R1_DM LINE R1 1 621 -4735 7 602 4073 22 0 0 chrUextra 2297141 2297641 -26707015 + FW_DM LINE Jockey 4193 4692 0 7 602 254 29 0 0 chrUextra 2297652 2297686 -26706970 - R1_DM LINE R1 -3966 1390 1357 7 602 3563 48 43 2 chrUextra 2297686 2298170 -26706486 - R1_DM LINE R1 -4150 1206 703 7 602 195 42 0 0 chrUextra 2298607 2298631 -26706025 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 7 602 189 0 0 0 chrUextra 2298682 2298703 -26705953 + (CCCCCT)n Simple_repeat Simple_repeat 4 24 0 7 602 3944 23 0 0 chrUextra 2300528 2301005 -26703651 - DOC2_DM LINE Jockey -258 4535 4059 7 602 4600 11 2 0 chrUextra 2301012 2301557 -26703099 - DOC2_DM LINE Jockey -1135 3658 3113 7 602 3468 33 0 2 chrUextra 2301672 2302101 -26702555 - ROO_LTR LTR Pao 0 428 1 7 602 26 50 0 0 chrUextra 2302136 2302176 -26702480 + AT_rich Low_complexity Low_complexity 1 40 0 7 602 2452 14 0 0 chrUextra 2302391 2302681 -26701975 - DMRT1A LINE R1 -1051 4132 3843 7 602 270 188 16 0 chrUextra 2302787 2302851 -26701805 + XDMR Unknown Unknown 297 361 0 7 602 3332 177 34 18 chrUextra 2302796 2303813 -26700843 - SAR_DM Satellite Satellite -353 1033 1 7 602 374 307 0 0 chrUextra 2304127 2304254 -26700402 - MICROPIA_I LTR Gypsy -682 3794 3668 7 602 1256 289 54 13 chrUextra 2304301 2304898 -26699758 - MICROPIA_I LTR Gypsy -1159 3317 2697 7 602 728 212 116 99 chrUextra 2305042 2305943 -26698713 - ROVER-I_DM LTR Gypsy -5515 1069 1 7 602 308 79 27 103 chrUextra 2305943 2306018 -26698638 - DMTOM1_LTR LTR Gypsy -7 403 308 7 602 1652 43 14 0 chrUextra 2306169 2306380 -26698276 - CIRCE LINE Composite -3222 3134 2921 7 602 3015 30 11 81 chrUextra 2306379 2306867 -26697789 + ROO_I LTR Pao 182 728 -7528 7 602 327 136 0 0 chrUextra 2306867 2306926 -26697730 + (CAG)n Simple_repeat Simple_repeat 1 59 0 7 602 410 235 36 111 chrUextra 2306926 2306993 -26697663 + ROO_I LTR Pao 729 795 -7461 7 602 484 334 27 27 chrUextra 2307298 2307627 -26697029 - Invader1_I LTR Gypsy -2668 518 190 7 602 265 289 82 0 chrUextra 2307686 2307783 -26696873 - MICROPIA_I LTR Gypsy -4371 105 1 7 602 231 276 12 132 chrUextra 2307890 2308057 -26696599 - ACCORD2_I LTR Gypsy -6540 672 526 7 602 1027 148 0 58 chrUextra 2308102 2308325 -26696331 - TAHRE LINE telomeric -9832 631 422 7 602 7914 7 0 26 chrUextra 2308425 2309453 -26695203 - DM176_I LTR Gypsy -4420 2000 1000 7 602 3724 184 18 20 chrUextra 2309553 2310580 -26694076 + SAR_DM Satellite Satellite 1 1024 -208 7 602 3271 163 36 3 chrUextra 2310681 2311316 -26693340 + HETA LINE telomeric 1773 2428 -3653 7 602 891 133 0 0 chrUextra 2311309 2311459 -26693197 + HETA LINE telomeric 2767 2916 -3165 7 602 1625 76 108 0 chrUextra 2311458 2311709 -26692947 + HETA LINE telomeric 2442 2719 -3362 7 602 4149 6 0 0 chrUextra 2311809 2312289 -26692367 + TABOR_LTR LTR Gypsy 27 506 0 7 602 1272 261 103 2 chrUextra 2312940 2313366 -26691290 + Gypsy3_I LTR Gypsy 2297 2765 -3412 7 602 1832 54 147 7 chrUextra 2313370 2313670 -26690986 + PROTOP DNA P 3133 3474 -1006 7 602 764 98 151 12 chrUextra 2313708 2313874 -26690782 + PROTOP DNA P 3726 3914 -566 7 602 405 156 0 0 chrUextra 2313882 2313959 -26690697 - DNAREP1_DM LINE Penelope -381 213 137 7 602 246 150 0 0 chrUextra 2314085 2314125 -26690531 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 602 246 150 0 0 chrUextra 2314177 2314217 -26690439 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 602 27 29 0 0 chrUextra 2314222 2314256 -26690400 + AT_rich Low_complexity Low_complexity 1 34 0 7 602 1189 39 0 25 chrUextra 2314328 2314464 -26690192 - LSU-rRNA_Dme rRNA rRNA 0 3900 3769 7 602 5436 0 0 2 chrUextra 2314464 2315091 -26689565 + POGO DNA Pogo 1 626 -1495 7 602 903 281 31 31 chrUextra 2315742 2316158 -26688498 - Copia2_I LTR Copia -2263 1899 1392 7 602 4009 99 66 18 chrUextra 2316328 2317338 -26687318 - TART LINE telomeric -6799 7678 7027 7 602 3877 186 15 20 chrUextra 2317452 2318435 -26686221 - SAR_DM Satellite Satellite -300 1172 195 7 602 767 115 0 0 chrUextra 2318342 2318472 -26686184 + ARS406_DM Unknown Unknown 1 130 -223 7 602 7385 51 19 5 chrUextra 2318575 2319599 -26685057 + IDEFIX_I LTR Gypsy 2631 3669 -1959 7 602 3896 63 32 3 chrUextra 2319699 2320726 -26683930 - PROTOP DNA P -29 1076 154 7 602 8649 14 10 0 chrUextra 2320827 2321853 -26682803 + DM1731_I LTR Copia 1077 2112 -1864 7 602 1001 47 0 0 chrUextra 2321953 2322082 -26682574 + CIRCE LINE Composite 4852 4980 -1376 7 602 1682 41 5 5 chrUextra 2322272 2322491 -26682165 - R1_DM LINE R1 -4037 1319 1101 7 602 3107 67 5 7 chrUextra 2322486 2322922 -26681734 - R1_DM LINE R1 -4921 435 1 7 602 441 0 0 0 chrUextra 2324205 2324256 -26680400 - Gypsy4_I LTR Gypsy -6237 51 1 7 602 2439 17 0 0 chrUextra 2324256 2324543 -26680113 - Gypsy4_LTR LTR Gypsy 0 287 1 7 602 3992 73 13 7 chrUextra 2325331 2326357 -26678299 + R1_DM LINE R1 26 1436 -3920 7 602 3650 35 113 4 chrUextra 2326457 2326980 -26677676 + ROOA_I LTR Pao 5961 6540 -309 7 602 805 11 0 0 chrUextra 2326979 2327073 -26677583 + ROOA_I LTR Pao 6749 6842 -7 7 602 465 35 0 0 chrUextra 2327079 2327137 -26677519 + ROOA_LTR LTR Pao 329 386 0 7 602 383 183 17 17 chrUextra 2327180 2327297 -26677359 + DMCR1A LINE CR1 75 191 -4279 7 602 8573 1 31 0 chrUextra 2327583 2328609 -26676047 + DM176_I LTR Gypsy 2459 3516 -2904 7 602 526 56 0 0 chrUextra 2328709 2328781 -26675875 + ARS406_DM Unknown Unknown 118 189 -164 7 602 3746 202 21 17 chrUextra 2328718 2329721 -26674935 - SAR_DM Satellite Satellite -242 1230 224 7 602 452 120 0 0 chrUextra 2329659 2329734 -26674922 + ARS406_DM Unknown Unknown 1 75 -278 7 602 3012 18 34 0 chrUextra 2329834 2330219 -26674437 - IDEFIX_LTR LTR Gypsy -196 398 1 7 602 241 105 0 0 chrUextra 2330187 2330225 -26674431 + BARI1 DNA Tc1 3 40 -1710 7 602 24 0 0 0 chrUextra 2330470 2330494 -26674162 + AT_rich Low_complexity Low_complexity 1 24 0 7 602 414 65 0 16 chrUextra 2330796 2330859 -26673797 - DMRT1B LINE R1 -340 4843 4782 7 602 2510 87 32 21 chrUextra 2332084 2333109 -26671547 - DMSAT6 Satellite Satellite -103 1037 1 7 602 2724 0 0 0 chrUextra 2333209 2333521 -26671135 + NOMAD_LTR LTR Gypsy 207 518 0 7 602 258 0 0 43 chrUextra 2333521 2333567 -26671089 - BATUMI_I LTR Pao -7253 710 667 7 602 3560 52 137 23 chrUextra 2333585 2334234 -26670422 - BATUMI_I LTR Pao -7228 735 13 7 602 1016 169 99 30 chrUextra 2334350 2334613 -26670043 - Gypsy12_LTR LTR Gypsy -892 1444 1164 7 602 412 86 0 0 chrUextra 2334826 2334884 -26669772 - Gypsy12_I LTR Gypsy -3986 1560 1503 7 602 3140 87 0 19 chrUextra 2334891 2335359 -26669297 - Gypsy12_I LTR Gypsy -3992 1554 1096 7 602 3850 112 42 53 chrUextra 2335672 2336475 -26668181 - PROTOP_B DNA P 0 1153 360 7 602 3763 66 0 25 chrUextra 2336583 2337113 -26667543 + CIRCE LINE Composite 2319 2835 -3521 7 602 3799 45 8 2 chrUextra 2337115 2337607 -26667049 + CIRCE LINE Composite 2961 3455 -2901 7 602 2833 192 13 18 chrUextra 2338831 2339855 -26664801 + SAR_DM Satellite Satellite 1 1018 -569 7 602 779 72 24 8 chrUextra 2339992 2340118 -26664538 - STALKER4_I LTR Gypsy -5645 885 758 7 602 1035 173 90 76 chrUextra 2340184 2340540 -26664116 - ROVER-LTR_DM LTR Gypsy 0 367 7 7 602 373 194 87 10 chrUextra 2340758 2340862 -26663794 - DNAREP1_DM LINE Penelope -416 178 67 7 602 51 31 0 0 chrUextra 2342020 2342085 -26662571 + AT_rich Low_complexity Low_complexity 1 65 0 7 602 1063 51 0 0 chrUextra 2342203 2342341 -26662315 + R1_DM LINE R1 4696 4833 -523 7 602 2706 17 64 0 chrUextra 2342341 2342489 -26662167 - Stalker3_LTR LTR Gypsy 0 372 225 7 602 186 43 0 0 chrUextra 2342489 2342512 -26662144 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 602 2706 17 64 0 chrUextra 2342512 2342707 -26661949 - Stalker3_LTR LTR Gypsy -148 224 8 7 602 292 50 0 0 chrUextra 2342713 2342753 -26661903 - STALKER4_I LTR Gypsy 0 6530 6491 7 602 29 0 0 0 chrUextra 2342753 2342782 -26661874 + AT_rich Low_complexity Low_complexity 1 29 0 7 602 189 0 0 0 chrUextra 2342810 2342831 -26661825 + (T)n Simple_repeat Simple_repeat 1 21 0 7 602 3618 202 17 24 chrUextra 2344452 2345475 -26659181 - SAR_DM Satellite Satellite -836 1016 1 7 602 2726 209 112 18 chrUextra 2345612 2346577 -26658079 + SAR_DM Satellite Satellite 201 1256 -216 7 602 730 92 0 0 chrUextra 2346490 2346599 -26658057 - ARS406_DM Unknown Unknown -167 186 78 7 602 4908 38 47 33 chrUextra 2346699 2347418 -26657238 + PROTOP_A DNA P 377 1105 0 7 602 1491 55 14 9 chrUextra 2347825 2348046 -26656610 + G5_DM LINE Jockey 4635 4856 0 7 602 1527 107 4 4 chrUextra 2348045 2348289 -26656367 - BS2 LINE Jockey -4464 257 14 7 602 31 58 0 0 chrUextra 2348494 2348546 -26656110 + AT_rich Low_complexity Low_complexity 1 52 0 7 602 192 40 0 0 chrUextra 2348663 2348688 -26655968 + (TAA)n Simple_repeat Simple_repeat 1 25 0 7 602 8303 23 0 13 chrUextra 2348947 2349971 -26654685 - Gypsy2_I LTR Gypsy -4841 1294 284 7 602 365 114 0 12 chrUextra 2350071 2350151 -26654505 + NTS_DM Other Other 118 196 -44 7 602 1034 143 38 21 chrUextra 2350368 2350604 -26654052 + NTS_DM Other Other 1 240 0 7 602 280 104 21 0 chrUextra 2350604 2350652 -26654004 + NTS_DM Other Other 1 49 -191 7 602 862 109 0 0 chrUextra 2350742 2350879 -26653777 + NTS_DM Other Other 1 137 -103 7 602 357 159 53 38 chrUextra 2350887 2351018 -26653638 + NTS_DM Other Other 108 240 0 7 602 306 83 21 0 chrUextra 2351018 2351066 -26653590 + NTS_DM Other Other 1 49 -191 7 602 3449 202 36 25 chrUextra 2351197 2352217 -26652439 + SAR_DM Satellite Satellite 1 1031 -227 7 602 40 67 0 0 chrUextra 2352840 2352915 -26651741 + AT_rich Low_complexity Low_complexity 1 75 0 7 602 2532 78 21 21 chrUextra 2353450 2353920 -26650736 + DMSAT6 Satellite Satellite 1 470 0 7 602 2148 98 18 67 chrUextra 2353958 2354452 -26650204 + DMSAT6 Satellite Satellite 1 470 0 7 602 26 30 0 0 chrUextra 2354688 2354721 -26649935 + AT_rich Low_complexity Low_complexity 1 33 0 7 602 213 39 0 0 chrUextra 2355035 2355061 -26649595 + (TA)n Simple_repeat Simple_repeat 2 27 0 7 602 737 82 9 0 chrUextra 2355097 2355207 -26649449 + (TA)n Simple_repeat Simple_repeat 2 112 0 7 602 276 231 0 0 chrUextra 2355283 2355361 -26649295 + (TA)n Simple_repeat Simple_repeat 2 79 0 7 602 22 0 0 0 chrUextra 2355456 2355478 -26649178 + AT_rich Low_complexity Low_complexity 1 22 0 7 602 8341 8 30 9 chrUextra 2355686 2356709 -26647947 + Gypsy6_I LTR Gypsy 1272 2316 -4696 7 602 5404 55 110 10 chrUextra 2356809 2357673 -26646983 + TART LINE telomeric 2201 3150 -11327 7 602 758 129 7 0 chrUextra 2357685 2357832 -26646824 + TART LINE telomeric 3295 3442 -11035 7 602 206 228 0 60 chrUextra 2358293 2358377 -26646279 + A-rich Low_complexity Low_complexity 2 80 0 7 602 25 31 0 0 chrUextra 2358502 2358534 -26646122 + AT_rich Low_complexity Low_complexity 1 32 0 7 75 4130 29 2 2 chrUextra 2359054 2359573 -26645083 + NINJA_I LTR Pao 1122 1640 -4371 7 603 743 77 0 0 chrUextra 2359954 2360058 -26644598 + HOBO DNA hAT 23 126 -2890 7 603 3080 21 3 3 chrUextra 2360177 2360561 -26644095 - R1_DM LINE R1 -4150 1206 823 7 603 3294 71 9 4 chrUextra 2360555 2361019 -26643637 - R1_DM LINE R1 -4890 466 1 7 603 1215 14 0 7 chrUextra 2361052 2361198 -26643458 - R1_DM LINE R1 0 5356 5212 7 603 380 171 0 0 chrUextra 2361298 2361387 -26643269 - Gypsy3_I LTR Gypsy -4727 2285 2218 7 603 554 284 264 0 chrUextra 2361471 2361691 -26642965 - Gypsy3_I LTR Gypsy -4593 1584 1307 7 603 501 278 30 0 chrUextra 2361680 2361813 -26642843 - Gypsy6_I LTR Gypsy -5469 1543 1407 7 603 3904 196 12 17 chrUextra 2362420 2363429 -26641227 + SAR_DM Satellite Satellite 253 1256 -216 7 603 816 29 0 0 chrUextra 2363338 2363442 -26641214 - ARS406_DM Unknown Unknown -164 189 86 7 603 5586 66 44 2 chrUextra 2363542 2364383 -26640273 + STALKER4_I LTR Gypsy 2583 3458 -3072 7 603 1084 106 28 0 chrUextra 2364384 2364564 -26640092 + IDEFIX_I LTR Gypsy 437 621 -5007 7 603 1351 134 44 7 chrUextra 2364664 2364935 -26639721 - DMSAT6 Satellite Satellite -181 289 9 7 603 2309 104 27 25 chrUextra 2364949 2365686 -26638970 - DMSAT6 Satellite Satellite 0 738 1 7 603 1189 194 3 3 chrUextra 2365786 2366070 -26638586 - SAR_DM Satellite Satellite -693 779 496 7 603 794 20 0 0 chrUextra 2366075 2366173 -26638483 + ARS406_DM Unknown Unknown 90 187 -166 7 603 1659 179 8 7 chrUextra 2366085 2366808 -26637848 - SAR_DM Satellite Satellite -569 723 1 7 603 221 167 0 0 chrUextra 2366934 2366976 -26637680 + T-rich Low_complexity Low_complexity 1 42 0 7 603 234 91 0 0 chrUextra 2367597 2367630 -26637026 + (CTG)n Simple_repeat Simple_repeat 1 33 0 7 603 2693 134 6 10 chrUextra 2368030 2368511 -26636145 + TAHRE LINE telomeric 9981 10459 -4 7 603 2570 122 32 38 chrUextra 2368498 2369052 -26635604 + TART LINE telomeric 9498 10048 -4429 7 603 1726 37 0 0 chrUextra 2369152 2369369 -26635287 - ROOA_LTR LTR Pao -169 217 1 7 603 547 122 44 0 chrUextra 2369372 2369462 -26635194 - TRANSIB2 DNA Transib -516 2328 2235 7 603 1496 51 139 0 chrUextra 2369488 2369725 -26634931 - TRANSIB2 DNA Transib 0 2844 2575 7 603 3207 58 34 2 chrUextra 2369725 2370173 -26634483 - TRANSIB2 DNA Transib -1372 1472 1011 7 603 3966 35 77 0 chrUextra 2370273 2370794 -26633862 - FW_DM LINE Jockey -4131 561 1 7 603 3663 36 104 2 chrUextra 2370802 2371294 -26633362 + R1_DM LINE R1 1377 1918 -3438 7 603 1131 30 24 0 chrUextra 2371394 2371563 -26633093 - TLD2 Unknown Unknown -45 173 1 7 603 733 322 23 23 chrUextra 2371397 2372019 -26632637 - Gypsy4_I LTR Gypsy -3769 3243 2255 7 603 2977 16 3 3 chrUextra 2372515 2372880 -26631776 + R1_DM LINE R1 3644 4008 -1348 7 603 1395 0 0 0 chrUextra 2372875 2373039 -26631617 + R1_DM LINE R1 4903 5066 -290 7 603 923 44 0 0 chrUextra 2373036 2373150 -26631506 + R1_DM LINE R1 5243 5356 0 7 603 2409 60 6 17 chrUextra 2373183 2373536 -26631120 + R1_DM LINE R1 1 349 -5007 7 603 7809 40 3 4 chrUextra 2373636 2374657 -26629999 - R1_DM LINE R1 -4184 1172 153 7 603 476 272 95 0 chrUextra 2374839 2375008 -26629648 + Gypsy_I LTR Gypsy 1881 2065 -4442 7 603 1365 141 106 16 chrUextra 2375022 2375390 -26629266 + DNAREP1_DM LINE Penelope 1 335 -259 7 603 882 137 54 0 chrUextra 2375392 2375560 -26629096 - DMCR1A LINE CR1 -171 4299 4123 7 603 293 226 275 7 chrUextra 2375582 2375720 -26628936 + Gypsy_I LTR Gypsy 1098 1272 -5235 7 603 3780 188 20 32 chrUextra 2375883 2376897 -26627759 + SAR_DM Satellite Satellite 1 1002 -208 7 603 5836 14 0 0 chrUextra 2377325 2378020 -26626636 - Copia2_I LTR Copia -2248 1914 1220 7 603 4940 7 0 0 chrUextra 2378120 2378697 -26625959 - DOC LINE Jockey -131 4594 4018 7 603 2787 6 0 0 chrUextra 2378699 2379022 -26625634 - DOC LINE Jockey -932 3793 3471 7 603 856 62 0 0 chrUextra 2379028 2379141 -26625515 - DOC4_DM LINE Jockey -940 1851 1739 7 603 2097 142 8 12 chrUextra 2379241 2379692 -26624964 - STALKER4_I LTR Gypsy -5763 767 235 7 603 289 96 0 37 chrUextra 2379881 2379935 -26624721 - STALKER4_I LTR Gypsy -7350 52 1 7 603 330 25 0 0 chrUextra 2379935 2379962 -26624694 - STALKER4_I LTR Gypsy -6503 27 1 7 603 2536 7 0 3 chrUextra 2379962 2380261 -26624395 - STALKER4_LTR LTR Gypsy 0 402 105 7 603 2230 102 18 24 chrUextra 2380361 2381381 -26623275 + DMSAT6 Satellite Satellite 1 1013 -18 7 603 288 58 0 88 chrUextra 2381481 2381538 -26623118 + BATUMI_I LTR Pao 718 769 -7194 7 603 2679 87 112 40 chrUextra 2381579 2382501 -26622155 + BATUMI_I LTR Pao 749 1736 -6227 7 603 4289 17 31 0 chrUextra 2382601 2383141 -26621515 + DMCR1A LINE CR1 3838 4394 -76 7 603 351 336 7 0 chrUextra 2383284 2383433 -26621223 - NOMAD_I LTR Gypsy -1528 5044 4895 7 603 346 325 6 6 chrUextra 2383462 2383620 -26621036 - NOMAD_I LTR Gypsy -1770 4802 4645 7 603 6794 39 9 72 chrUextra 2383721 2384741 -26619915 - BATUMI_I LTR Pao -6161 1802 847 7 603 4177 68 24 8 chrUextra 2384841 2385462 -26619194 - TRANSIB4 DNA Transib -1910 700 70 7 603 312 211 0 0 chrUextra 2385534 2385610 -26619046 - Gypsy_I LTR Gypsy -3 6504 6429 7 603 554 159 86 16 chrUextra 2385643 2385771 -26618885 + DNAREP1_DM LINE Penelope 432 568 -26 7 603 7659 25 4 28 chrUextra 2385961 2386980 -26617676 + Gypsy12_LTR LTR Gypsy 1321 2315 -21 7 603 4443 13 93 0 chrUextra 2387082 2388099 -26616557 - DOC2_DM LINE Jockey -946 3847 2736 7 603 9476 0 0 0 chrUextra 2388199 2389218 -26615438 + Gypsy2_I LTR Gypsy 3576 4594 -1541 7 603 7776 8 6 0 chrUextra 2389318 2390167 -26614489 - LSU-rRNA_Dme rRNA rRNA -407 3493 2640 7 603 1489 35 0 0 chrUextra 2390165 2390337 -26614319 - R1_DM LINE R1 0 5356 5185 7 603 2698 22 31 0 chrUextra 2390437 2390754 -26613902 - FW_DM LINE Jockey -3518 1174 848 7 603 3163 38 0 0 chrUextra 2390753 2391122 -26613534 - FW_DM LINE Jockey -4323 369 1 7 603 394 274 8 16 chrUextra 2391300 2391426 -26613230 - DIVER2_I LTR Pao -1784 2363 2239 7 603 1879 291 34 37 chrUextra 2391556 2392571 -26612085 - SAR_DM Satellite Satellite -219 1253 243 7 603 3490 5 0 0 chrUextra 2392675 2393052 -26611604 - DOC LINE Jockey -4347 378 2 7 603 23 0 0 0 chrUextra 2393134 2393157 -26611499 + AT_rich Low_complexity Low_complexity 1 23 0 7 603 236 331 47 52 chrUextra 2393231 2393639 -26611017 + BLOOD_I LTR Gypsy 1456 1861 -4752 7 603 4300 189 17 22 chrUextra 2393794 2394801 -26609855 + SAR_DM Satellite Satellite 246 1247 -225 7 603 689 76 11 0 chrUextra 2394721 2394813 -26609843 - ARS406_DM Unknown Unknown -164 189 97 7 603 2448 149 62 22 chrUextra 2394930 2395648 -26609008 - Stalker2_I LTR Gypsy -5525 1005 144 7 603 1210 91 3 34 chrUextra 2395732 2395932 -26608724 - STALKER4_LTR LTR Gypsy -3 399 240 7 603 1237 269 127 25 chrUextra 2396254 2397051 -26607605 - MICROPIA_I LTR Gypsy -682 3794 2917 7 603 3475 167 20 16 chrUextra 2397151 2398168 -26606488 + SAR_DM Satellite Satellite 1 1021 -378 7 603 1346 0 0 0 chrUextra 2398269 2398413 -26606243 - BEL_I LTR Pao -5260 144 1 7 603 3383 0 0 0 chrUextra 2398413 2398774 -26605882 - BEL_LTR LTR Pao 0 361 1 7 603 4574 10 2 2 chrUextra 2398774 2399287 -26605369 + PROTOP DNA P 979 1491 -2989 7 603 7731 51 33 12 chrUextra 2399387 2400405 -26604251 - R1_DM LINE R1 -4312 1044 5 7 603 257 191 63 0 chrUextra 2400507 2400570 -26604086 - DM176_LTR LTR Gypsy -146 361 295 7 603 267 215 11 151 chrUextra 2400679 2400772 -26603884 - DM176_LTR LTR Gypsy -238 269 190 7 603 26 30 0 0 chrUextra 2401156 2401189 -26603467 + AT_rich Low_complexity Low_complexity 1 33 0 7 603 349 107 18 0 chrUextra 2401453 2401509 -26603147 - DNAREP1_DM LINE Penelope 0 594 538 7 603 2178 75 20 72 chrUextra 2401624 2402111 -26602545 - DMSAT6 Satellite Satellite -4 466 5 7 603 2434 84 0 43 chrUextra 2402125 2402609 -26602047 - DMSAT6 Satellite Satellite -3 467 5 7 603 6926 98 31 11 chrUextra 2402741 2403759 -26600897 + HETA LINE telomeric 1918 2956 -3125 7 603 4045 194 25 21 chrUextra 2403870 2404877 -26599779 - SAR_DM Satellite Satellite -396 1076 66 7 603 3200 8 0 0 chrUextra 2404979 2405338 -26599318 - STALKER4_I LTR Gypsy -1008 5522 5164 7 603 2648 164 9 8 chrUextra 2405329 2405988 -26598668 + BATUMI_I LTR Pao 4002 4738 -3176 7 603 3074 272 34 13 chrUextra 2406096 2407096 -26597560 - G6_DM LINE Jockey -756 1286 266 7 603 5070 134 56 9 chrUextra 2407211 2408228 -26596428 - TART_B1 LINE telomeric -7977 2677 1203 7 603 7543 63 14 3 chrUextra 2408328 2409330 -26595326 + PROTOP_B DNA P 125 1137 -16 7 603 4962 227 3 3 chrUextra 2409446 2410462 -26594194 + Gypsy6_I LTR Gypsy 4263 5278 -1734 7 603 5499 166 81 3 chrUextra 2410563 2411579 -26593077 + HETA LINE telomeric 1366 2460 -3621 7 603 589 240 35 35 chrUextra 2411680 2411879 -26592777 + Gypsy12_LTR LTR Gypsy 951 1149 -1187 7 603 3238 166 39 42 chrUextra 2411888 2412574 -26592082 + Gypsy12_LTR LTR Gypsy 1653 2336 0 7 603 750 60 33 41 chrUextra 2412574 2412695 -26591961 + Gypsy12_I LTR Gypsy 1 120 -5426 7 603 8527 27 25 3 chrUextra 2413913 2414930 -26589726 - IDEFIX_I LTR Gypsy -2271 3357 2319 7 603 3672 196 45 24 chrUextra 2415030 2416044 -26588612 + SAR_DM Satellite Satellite 1 1035 -216 7 603 8459 23 3 3 chrUextra 2416164 2417163 -26587493 - ROO_I LTR Pao 0 8256 7258 7 603 6805 15 48 1 chrUextra 2417263 2418279 -26586377 + TART LINE telomeric 8037 8943 -5534 7 603 47 0 0 0 chrUextra 2418533 2418580 -26586076 + AT_rich Low_complexity Low_complexity 1 47 0 7 603 1926 15 0 65 chrUextra 2418596 2418875 -26585781 - Gypsy4_I LTR Gypsy -5911 377 117 7 603 2269 46 7 37 chrUextra 2418891 2419187 -26585469 - Gypsy4_LTR LTR Gypsy 0 287 1 7 603 706 81 10 0 chrUextra 2419296 2419395 -26585261 + HOBO DNA hAT 23 122 -2894 7 603 2484 61 2 58 chrUextra 2419495 2419891 -26584765 + ROO_I LTR Pao 807 1592 -6664 7 603 5255 35 0 0 chrUextra 2419890 2420511 -26584145 + ROO_I LTR Pao 1850 2470 -5786 7 603 1360 40 0 137 chrUextra 2420623 2420857 -26583799 + Gypsy8_I LTR Gypsy 1332 1533 -2814 7 603 382 123 62 0 chrUextra 2420858 2420923 -26583733 - I_DM LINE I -6057 174 106 7 603 35 71 0 0 chrUextra 2420930 2421000 -26583656 + AT_rich Low_complexity Low_complexity 1 70 0 7 603 1541 75 9 27 chrUextra 2421000 2421220 -26583436 - DMCR1A LINE CR1 0 4470 4255 7 603 1518 66 0 10 chrUextra 2421215 2421414 -26583242 - DMCR1A LINE CR1 -2868 1602 1406 7 603 1684 55 18 0 chrUextra 2421407 2421627 -26583029 - FB4_DM DNA Tc1 -3865 224 1 7 603 2607 91 17 30 chrUextra 2421727 2422743 -26581913 + DMSAT6 Satellite Satellite 1 1001 -69 7 603 6708 4 0 0 chrUextra 2422844 2423566 -26581090 + LSU-rRNA_Dme rRNA rRNA 1856 2577 -1323 7 603 2399 4 0 4 chrUextra 2423597 2423859 -26580797 + R2_DM LINE R2 1 261 -3346 7 603 25 0 0 0 chrUextra 2423973 2423998 -26580658 + AT_rich Low_complexity Low_complexity 1 25 0 7 603 5300 142 13 33 chrUextra 2425075 2426091 -26578565 + Gypsy3_I LTR Gypsy 1513 2791 -4221 7 603 200 0 100 0 chrUextra 2426426 2426466 -26578190 + (TA)n Simple_repeat Simple_repeat 1 44 0 7 603 228 78 78 0 chrUextra 2426812 2426863 -26577793 + (TA)n Simple_repeat Simple_repeat 1 55 0 7 603 226 382 0 0 chrUextra 2426966 2427076 -26577580 - DIVER2_I LTR Pao -158 3989 3880 7 603 4494 21 104 0 chrUextra 2427307 2428323 -26576333 + NINJA_I LTR Pao 4009 5130 -881 7 603 5479 14 0 5 chrUextra 2428423 2429054 -26575602 + MDG3_I LTR Gypsy 2348 2975 -2011 7 603 1277 0 0 0 chrUextra 2429024 2429164 -26575492 + MDG3_I LTR Gypsy 4847 4986 0 7 603 2452 4 0 0 chrUextra 2429164 2429431 -26575225 + MDG3_LTR LTR Gypsy 1 267 0 7 603 356 57 0 70 chrUextra 2429544 2429601 -26575055 - DNAREP1_DM LINE Penelope -34 560 508 7 603 7141 57 48 8 chrUextra 2429607 2430554 -26574102 - DMCR1A LINE CR1 0 4470 3487 7 603 1595 187 0 19 chrUextra 2430654 2430976 -26573680 - STALKER4_I LTR Gypsy -5987 543 228 7 603 26 50 0 0 chrUextra 2430976 2431016 -26573640 + AT_rich Low_complexity Low_complexity 1 40 0 7 603 2559 58 55 15 chrUextra 2431104 2431462 -26573194 - STALKER4_LTR LTR Gypsy -3 399 64 7 603 979 66 96 0 chrUextra 2431459 2431595 -26573061 - FW2_DM LINE Jockey -3429 532 384 7 603 504 83 0 0 chrUextra 2431597 2431669 -26572987 - FW2_DM LINE Jockey -3805 156 85 7 603 442 95 0 31 chrUextra 2431769 2431834 -26572822 + RSP Satellite Satellite 55 117 -1 7 603 870 106 6 16 chrUextra 2431874 2432501 -26572155 + RSP Satellite Satellite 1 621 0 7 603 868 85 0 12 chrUextra 2432541 2432784 -26571872 + RSP Satellite Satellite 1 240 0 7 603 5143 46 106 74 chrUextra 2432974 2433836 -26570820 - ROO_I LTR Pao -7110 1146 258 7 603 1524 37 0 5 chrUextra 2434000 2434188 -26570468 - HETA LINE telomeric -2566 3515 3329 7 603 3228 32 61 2 chrUextra 2434190 2434599 -26570057 + NINJA_I LTR Pao 5579 6011 0 7 603 948 17 8 55 chrUextra 2434599 2434726 -26569930 + NINJA_LTR LTR Pao 1 121 -196 7 603 526 33 0 0 chrUextra 2434720 2434781 -26569875 - PROTOP_B DNA P -1092 61 1 7 603 1676 77 0 0 chrUextra 2434781 2435014 -26569642 - TART_B1 LINE telomeric -4967 5687 5455 7 603 358 77 19 0 chrUextra 2435114 2435166 -26569490 - Gypsy12_LTR LTR Gypsy -2283 53 1 7 603 6736 83 11 11 chrUextra 2435165 2436055 -26568601 - Gypsy12_I LTR Gypsy 0 5546 4657 7 603 659 26 0 0 chrUextra 2436053 2436129 -26568527 - PROTOP_A DNA P -950 155 80 7 603 2965 188 36 15 chrUextra 2436230 2436937 -26567719 - Jockey2 LINE Jockey -1608 1820 1419 7 603 646 148 29 59 chrUextra 2437107 2437243 -26567413 - Gypsy5_LTR LTR Gypsy -194 236 105 7 603 3295 26 0 0 chrUextra 2437344 2437723 -26566933 + G2_DM LINE Jockey 803 1181 -1921 7 603 5518 29 0 0 chrUextra 2437713 2438359 -26566297 + G2_DM LINE Jockey 2232 2877 -225 7 603 757 339 22 32 chrUextra 2438459 2438861 -26565795 + TV1I LTR Gypsy 572 969 -4994 7 603 911 245 7 11 chrUextra 2438863 2439135 -26565521 + TV1I LTR Gypsy 3864 4134 -1829 7 603 933 237 56 22 chrUextra 2439128 2439452 -26565204 + QUASIMODO_I LTR Gypsy 4257 4591 -1469 7 603 7622 45 84 12 chrUextra 2441801 2442815 -26561841 + DMCR1A LINE CR1 2497 3583 -887 7 603 1860 86 12 4 chrUextra 2442915 2443171 -26561485 + MDG1_LTR LTR Gypsy 164 421 -21 7 603 588 0 0 0 chrUextra 2444029 2444094 -26560562 - Invader2_LTR LTR Gypsy -201 65 1 7 603 4334 14 18 7 chrUextra 2444094 2445043 -26559613 - Invader2_I LTR Gypsy 0 4592 3586 7 603 1022 139 56 5 chrUextra 2445160 2445355 -26559301 - NTS_DM Other Other -35 205 1 7 603 299 106 21 0 chrUextra 2445446 2445493 -26559163 - NTS_DM Other Other -192 48 1 7 603 483 127 53 38 chrUextra 2445493 2445624 -26559032 - NTS_DM Other Other 0 240 108 7 603 856 108 8 0 chrUextra 2445632 2445761 -26558895 - NTS_DM Other Other -103 137 8 7 603 296 125 21 0 chrUextra 2445859 2445907 -26558749 - NTS_DM Other Other -191 49 1 7 603 1131 134 20 5 chrUextra 2445938 2446140 -26558516 - NTS_DM Other Other -35 205 1 7 603 1695 15 0 0 chrUextra 2446257 2446452 -26558204 - IDEFIX_LTR LTR Gypsy -399 195 1 7 603 3356 111 65 6 chrUextra 2446452 2447267 -26557389 - IDEFIX_I LTR Gypsy 0 5628 4516 7 603 8635 19 0 5 chrUextra 2447371 2447919 -26556737 + ROO_I LTR Pao 4944 5489 -2767 7 603 216 0 0 0 chrUextra 2447919 2447943 -26556713 + (TTATG)n Simple_repeat Simple_repeat 2 25 0 7 603 8635 19 0 5 chrUextra 2447943 2448384 -26556272 + ROO_I LTR Pao 5490 5928 -2328 7 603 2448 98 10 31 chrUextra 2448490 2449494 -26555162 + DMSAT6 Satellite Satellite 1 983 -18 7 603 4234 180 22 23 chrUextra 2449604 2450590 -26554066 + SAR_DM Satellite Satellite 180 1164 -308 7 603 568 203 21 14 chrUextra 2450464 2450609 -26554047 - XDMR_DM Unknown Unknown 0 360 215 7 603 3626 3 0 0 chrUextra 2450710 2451101 -26553555 - DMRT1B LINE R1 -20 5163 4773 7 603 2374 180 24 83 chrUextra 2451097 2451720 -26552936 - TART_B1 LINE telomeric -9086 1568 983 7 603 8804 19 18 0 chrUextra 2451823 2452836 -26551820 + PROTOP DNA P 886 1916 -2564 7 603 3979 2 0 0 chrUextra 2452936 2453374 -26551282 + DM176_I LTR Gypsy 2864 3301 -3119 7 603 434 20 0 0 chrUextra 2453387 2453436 -26551220 + DM176_I LTR Gypsy 3582 3630 -2790 7 603 4627 0 0 0 chrUextra 2453426 2453949 -26550707 + DM176_I LTR Gypsy 4513 5035 -1385 7 603 8774 25 5 0 chrUextra 2454049 2455062 -26549594 + R1_DM LINE R1 3915 4932 -424 7 603 3728 190 106 26 chrUextra 2455171 2456175 -26548481 - HETA LINE telomeric -461 5620 4537 7 603 6542 49 43 4 chrUextra 2456275 2457288 -26547368 - R1_DM LINE R1 -3916 1440 292 7 603 3028 103 41 117 chrUextra 2457389 2457929 -26546727 + Gypsy12_I LTR Gypsy 1323 1821 -3725 7 603 445 135 292 0 chrUextra 2457926 2458010 -26546646 + Gypsy12_I LTR Gypsy 4465 4574 -972 7 603 3470 15 0 0 chrUextra 2458010 2458400 -26546256 - PROTOP DNA P 0 4480 4091 7 603 8245 22 2 1 chrUextra 2458501 2459433 -26545223 - Gypsy4_I LTR Gypsy -2156 4132 3200 7 603 801 31 31 0 chrUextra 2459418 2459514 -26545142 - Gypsy4_I LTR Gypsy -3599 2689 2591 7 603 5027 11 0 0 chrUextra 2459614 2460168 -26544488 + Copia2_I LTR Copia 3607 4160 -2 7 603 233 29 0 0 chrUextra 2460170 2460202 -26544454 + Copia2_LTR_DM LTR Copia 1 32 -166 7 603 3217 3 0 0 chrUextra 2460202 2460548 -26544108 - Invader4_LTR LTR Gypsy 0 346 1 7 603 672 0 13 0 chrUextra 2460548 2460627 -26544029 - Invader4_I LTR Gypsy 0 2413 2334 7 603 9114 7 29 6 chrUextra 2460727 2461740 -26542916 + Invader6_I LTR Gypsy 148 1183 -2916 7 603 8833 26 0 0 chrUextra 2461840 2462852 -26541804 + DMRT1A LINE R1 1657 2668 -2515 7 603 4439 72 28 11 chrUextra 2462953 2463720 -26540936 + PROTOP_B DNA P 106 888 -217 7 603 313 50 0 0 chrUextra 2463713 2463773 -26540883 + PROTOP_B DNA P 572 631 -522 7 603 1423 48 16 0 chrUextra 2463778 2463966 -26540690 + PROTOP_B DNA P 794 984 -169 7 603 2469 94 12 39 chrUextra 2464066 2465073 -26539583 - DMSAT6 Satellite Satellite -149 979 1 7 603 1608 121 129 59 chrUextra 2465186 2465573 -26539083 - DM297_LTR LTR Gypsy 0 414 1 7 603 4793 42 3 3 chrUextra 2465587 2466181 -26538475 - IDEFIX_LTR LTR Gypsy 0 594 1 7 603 3744 170 20 18 chrUextra 2466305 2467103 -26537553 + SAR_DM Satellite Satellite 326 1125 -347 7 603 1830 14 0 0 chrUextra 2467093 2467302 -26537354 - DOC2_DM LINE Jockey 0 4793 4585 7 603 5912 18 40 0 chrUextra 2467402 2468414 -26536242 - DMRT1A LINE R1 -3564 1619 568 7 603 511 0 0 0 chrUextra 2468514 2468571 -26536085 + STALKER4_I LTR Gypsy 6474 6530 0 7 603 3376 52 1 14 chrUextra 2468571 2469010 -26535646 + STALKER4_LTR LTR Gypsy 1 399 -3 7 603 1149 66 0 0 chrUextra 2469626 2469778 -26534878 + ARS406_DM Unknown Unknown 38 189 -164 7 603 4065 187 18 20 chrUextra 2469675 2470614 -26534042 - SAR_DM Satellite Satellite -203 1269 333 7 603 1004 79 9 20 chrUextra 2470738 2471740 -26532916 + RSP Satellite Satellite 1 990 0 7 603 8783 24 1 1 chrUextra 2471850 2472862 -26531794 + R1_DM LINE R1 3619 4630 -726 7 603 4244 29 4 0 chrUextra 2473146 2473636 -26531020 + R1_DM LINE R1 4865 5356 0 7 603 2288 63 7 10 chrUextra 2473670 2473973 -26530683 + R1_DM LINE R1 24 325 -5031 7 603 4052 194 18 24 chrUextra 2474073 2475072 -26529584 - SAR_DM Satellite Satellite -821 993 1 7 603 3826 10 29 2 chrUextra 2475184 2475666 -26528990 + STALKER4_I LTR Gypsy 6036 6530 0 7 603 694 48 0 0 chrUextra 2475666 2475749 -26528907 + STALKER4_LTR LTR Gypsy 1 83 -319 7 603 4019 18 0 0 chrUextra 2475744 2476195 -26528461 - STALKER4_I LTR Gypsy -1740 4790 4340 7 603 3974 196 25 21 chrUextra 2476295 2477305 -26527351 + SAR_DM Satellite Satellite 1 1014 -203 7 603 1754 154 57 56 chrUextra 2477405 2477838 -26526818 - TART LINE telomeric -9441 5036 4698 7 603 1828 106 226 26 chrUextra 2477809 2478158 -26526498 - TART LINE telomeric -10448 4029 3611 7 603 1801 80 0 12 chrUextra 2478160 2478412 -26526244 - TART LINE telomeric -6449 8028 7780 7 603 494 0 0 0 chrUextra 2478517 2478573 -26526083 - NOMAD_I LTR Gypsy -6516 56 1 7 603 4800 0 0 0 chrUextra 2478573 2479091 -26525565 - NOMAD_LTR LTR Gypsy 0 518 1 7 603 3869 5 0 0 chrUextra 2479091 2479525 -26525131 + ROO_I LTR Pao 4710 5143 -3113 7 603 5089 6 0 0 chrUextra 2479625 2480174 -26524482 - DOC LINE Jockey -4173 552 4 7 603 3548 58 18 2 chrUextra 2480178 2480635 -26524021 + Gypsy4_I LTR Gypsy 3950 4341 -1947 7 603 2474 185 15 4 chrUextra 2480759 2481745 -26522911 + SAR_DM Satellite Satellite 1 996 -645 7 603 8769 13 38 0 chrUextra 2481845 2482853 -26521803 + QUASIMODO_I LTR Gypsy 2186 3231 -2829 7 603 3604 3 0 0 chrUextra 2482955 2483341 -26521315 - TABOR_LTR LTR Gypsy -115 391 6 7 603 1815 44 64 21 chrUextra 2483340 2483574 -26521082 - PROTOP DNA P -4236 244 1 7 603 5282 140 60 1 chrUextra 2484065 2485069 -26519587 - HETA LINE telomeric -2794 3287 2042 7 603 1385 246 33 13 chrUextra 2485173 2485564 -26519092 - TOM_I LTR Gypsy -1157 4955 4557 7 603 446 252 17 17 chrUextra 2485564 2485681 -26518975 - DM297_I LTR Gypsy -2673 3494 3378 7 603 2431 181 59 21 chrUextra 2485654 2486179 -26518477 - TOM_I LTR Gypsy -2954 3158 2614 7 603 2305 29 0 0 chrUextra 2486282 2486561 -26518095 + Invader1_I LTR Gypsy 2908 3186 0 7 603 3843 7 0 5 chrUextra 2486561 2486986 -26517670 + Invader1_LTR LTR Gypsy 1 423 0 7 603 2817 10 0 0 chrUextra 2486986 2487291 -26517365 + Invader1_I LTR Gypsy 1 305 -2881 7 603 4070 53 3 79 chrUextra 2487391 2488001 -26516655 + Gypsy7_I LTR Gypsy 935 1498 -3486 7 603 3176 60 0 0 chrUextra 2488001 2488400 -26516256 + FW_DM LINE Jockey 111 509 -4183 7 603 8402 18 28 2 chrUextra 2488500 2489509 -26515147 - G6_DM LINE Jockey -299 1743 32 7 603 1562 208 147 9 chrUextra 2489664 2490120 -26514536 - Stalker2_I LTR Gypsy -6607 795 277 7 75 351 250 8 41 chrUextra 2490327 2490424 -26514232 - STALKER4_LTR LTR Gypsy -27 375 283 7 604 629 73 10 0 chrUextra 2490424 2490520 -26514136 - IDEFIX_LTR LTR Gypsy 0 594 498 7 604 734 31 10 10 chrUextra 2490521 2490618 -26514038 - IDEFIX_LTR LTR Gypsy -304 290 194 7 604 678 202 12 58 chrUextra 2490838 2491011 -26513645 + HETRP_DM Satellite Satellite 1518 1682 -190 7 604 755 184 12 58 chrUextra 2491141 2491314 -26513342 + HETRP_DM Satellite Satellite 1518 1682 -190 7 604 733 194 11 62 chrUextra 2491414 2491590 -26513066 + HETRP_DM Satellite Satellite 1518 1684 -188 7 604 198 0 0 0 chrUextra 2491705 2491727 -26512929 + (GA)n Simple_repeat Simple_repeat 2 23 0 7 604 2554 108 24 22 chrUextra 2491839 2492831 -26511825 + DMSAT6 Satellite Satellite 1 993 -18 7 604 914 97 15 0 chrUextra 2492936 2493070 -26511586 - DM297_I LTR Gypsy -6012 155 20 7 604 2477 92 39 8 chrUextra 2493076 2493460 -26511196 - DM297_LTR LTR Gypsy -18 396 1 7 604 2254 167 97 5 chrUextra 2493509 2493943 -26510713 - FW_DM LINE Jockey -3176 1516 1043 7 604 9395 2 0 0 chrUextra 2494043 2495051 -26509605 + Gypsy6_I LTR Gypsy 3338 4345 -2667 7 604 3040 290 10 7 chrUextra 2495157 2496158 -26508498 - ROVER-I_DM LTR Gypsy -1997 4587 3584 7 604 4311 221 7 15 chrUextra 2496259 2497260 -26507396 - Stalker2_I LTR Gypsy -1825 5577 4585 7 604 2441 52 27 18 chrUextra 2497367 2497697 -26506959 + BATUMI_I LTR Pao 6669 7001 -962 7 604 5411 98 11 5 chrUextra 2497535 2498375 -26506281 - BATUMI_I LTR Pao -1063 6851 5765 7 604 1428 6 0 0 chrUextra 2498475 2498634 -26506022 - NOMAD_I LTR Gypsy -6413 159 1 7 604 3733 5 0 0 chrUextra 2498634 2499041 -26505615 - NOMAD_LTR LTR Gypsy 0 518 112 7 604 2918 58 55 0 chrUextra 2499039 2499420 -26505236 + PROTOP_A DNA P 704 1105 0 7 604 987 17 0 0 chrUextra 2499583 2499700 -26504956 + (TTA)n Simple_repeat Simple_repeat 3 119 0 7 604 1144 81 19 0 chrUextra 2499720 2499880 -26504776 + Jockey2 LINE Jockey 3089 3251 -177 7 604 428 53 60 34 chrUextra 2499883 2500000 -26504656 + (TTA)n Simple_repeat Simple_repeat 1 120 0 7 604 591 27 0 0 chrUextra 2500000 2500073 -26504583 + (TTA)n Simple_repeat Simple_repeat 3 75 0 7 604 564 93 62 0 chrUextra 2500081 2500178 -26504478 + Jockey2 LINE Jockey 3321 3423 -5 7 604 805 100 282 0 chrUextra 2500205 2500375 -26504281 - DNAREP1_DM LINE Penelope -175 419 202 7 604 8673 33 7 0 chrUextra 2500691 2501699 -26502957 - R1_DM LINE R1 -2070 3286 2272 7 604 1469 101 50 0 chrUextra 2501799 2502018 -26502638 + S_DM DNA Tc1 1025 1254 -482 7 604 1940 94 73 3 chrUextra 2502008 2502337 -26502319 + S_DM DNA Tc1 1383 1734 -2 7 604 984 150 11 53 chrUextra 2502351 2502541 -26502115 - ACCORD2_I LTR Gypsy -6188 1024 843 7 604 1745 121 0 4 chrUextra 2502557 2502807 -26501849 - ACCORD2_I LTR Gypsy -6458 754 506 7 604 2659 3 0 0 chrUextra 2502907 2503205 -26501451 + G6_DM LINE Jockey 1745 2042 0 7 604 180 0 0 0 chrUextra 2503205 2503225 -26501431 + (A)n Simple_repeat Simple_repeat 1 20 0 7 604 2063 13 0 8 chrUextra 2503225 2503460 -26501196 + MICROPIA_I LTR Gypsy 403 635 -3841 7 604 4208 13 0 0 chrUextra 2503449 2503914 -26500742 + MICROPIA_I LTR Gypsy 742 1206 -3270 7 604 3683 204 31 12 chrUextra 2504017 2505021 -26499635 - SAR_DM Satellite Satellite -862 1023 1 7 604 4911 37 27 8 chrUextra 2505121 2505720 -26498936 + SSU-rRNA_Dme rRNA rRNA 1264 1873 -122 7 604 1059 46 23 0 chrUextra 2505715 2505846 -26498810 + LSU-rRNA_Dme rRNA rRNA 978 1111 -2789 7 604 351 64 0 0 chrUextra 2505839 2505886 -26498770 + LSU-rRNA_Dme rRNA rRNA 1575 1621 -2279 7 604 1007 43 420 9 chrUextra 2505876 2506113 -26498543 + LSU-rRNA_Dme rRNA rRNA 2009 2342 -1558 7 604 6293 9 3 0 chrUextra 2506228 2506926 -26497730 + DMRT1B LINE R1 4038 4737 -446 7 604 2871 3 0 0 chrUextra 2506922 2507235 -26497421 + DMRT1B LINE R1 4697 5009 -174 7 604 5636 26 88 3 chrUextra 2507336 2508038 -26496618 - NINJA_I LTR Pao -303 5708 4947 7 604 2693 29 0 0 chrUextra 2508027 2508342 -26496314 - NINJA_I LTR Pao -3092 2919 2605 7 604 2541 116 9 25 chrUextra 2508442 2508876 -26495780 + TAHRE LINE telomeric 10037 10463 0 7 604 1394 167 63 86 chrUextra 2508868 2509449 -26495207 + HETA LINE telomeric 1 616 -5465 7 604 7725 23 1 10 chrUextra 2509549 2510459 -26494197 - FW_DM LINE Jockey -1191 3501 2600 7 604 870 10 0 0 chrUextra 2510458 2510555 -26494101 - FW_DM LINE Jockey -2499 2193 2097 7 604 2948 18 0 3 chrUextra 2510655 2510987 -26493669 - R1_DM LINE R1 -3263 2093 1763 7 604 5258 43 1 5 chrUextra 2511001 2511656 -26493000 - R1_DM LINE R1 -4265 1091 439 7 604 686 182 36 0 chrUextra 2511761 2511898 -26492758 - TAHRE LINE telomeric -3278 7185 7044 7 604 1994 207 135 91 chrUextra 2511897 2512742 -26491914 - TART LINE telomeric -3421 11056 10175 7 604 5380 2 0 0 chrUextra 2512867 2513456 -26491200 + FW_DM LINE Jockey 4102 4690 -2 7 604 2635 33 0 0 chrUextra 2513454 2513760 -26490896 - DM1731_LTR LTR Copia -24 312 7 7 604 3420 60 91 0 chrUextra 2513973 2514491 -26490165 + PROTOP_A DNA P 570 1105 0 7 604 1901 44 65 0 chrUextra 2514542 2514967 -26489689 + PROTOP DNA P 448 766 -339 7 604 1924 34 77 0 chrUextra 2515850 2516085 -26488571 + PROTOP DNA P 1 253 -4227 7 604 970 91 9 20 chrUextra 2516187 2517183 -26487473 - RSP Satellite Satellite -54 984 1 7 604 8046 9 4 58 chrUextra 2517291 2518297 -26486359 - Gypsy4_I LTR Gypsy -858 5430 4479 7 604 3643 5 0 0 chrUextra 2518397 2518835 -26485821 - DM176_I LTR Gypsy -25 6395 5958 7 604 1605 60 137 0 chrUextra 2518835 2519069 -26485587 - Invader2_LTR LTR Gypsy 0 266 1 7 604 2882 0 3 0 chrUextra 2519069 2519403 -26485253 - Invader2_I LTR Gypsy 0 4592 4258 7 604 2471 127 34 36 chrUextra 2519515 2519963 -26484693 + TART LINE telomeric 7000 7446 -7031 7 604 4674 15 2 13 chrUextra 2519963 2520501 -26484155 + PROTOP_A DNA P 1 532 -573 7 604 3651 2 0 2 chrUextra 2520609 2521013 -26483643 - Stalker2_LTR LTR Gypsy -21 403 1 7 604 4417 14 13 13 chrUextra 2521013 2521615 -26483041 - Stalker2_I LTR Gypsy 0 7402 6801 7 604 3897 2 0 0 chrUextra 2521715 2522136 -26482520 - NOMAD_LTR LTR Gypsy -97 421 1 7 604 339 65 0 0 chrUextra 2522136 2522182 -26482474 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 604 1003 118 12 12 chrUextra 2522182 2522354 -26482302 + Gypsy11_LTR LTR Gypsy 281 452 0 7 604 480 133 100 0 chrUextra 2522383 2522473 -26482183 + DNAREP1_DM LINE Penelope 1 99 -495 7 604 1605 0 0 0 chrUextra 2522547 2522721 -26481935 + DM176_LTR LTR Gypsy 64 237 -270 7 604 1807 0 0 10 chrUextra 2522821 2523024 -26481632 + BATUMI_I LTR Pao 7763 7963 0 7 604 2159 39 7 31 chrUextra 2523024 2523315 -26481341 + BATUMI_I LTR Pao 7002 7285 -678 7 604 6246 32 4 56 chrUextra 2523927 2524766 -26479890 - NINJA_I LTR Pao -5181 830 36 7 604 1310 50 6 6 chrUextra 2524772 2524933 -26479723 - NINJA_LTR LTR Pao 0 317 157 7 604 9149 9 0 7 chrUextra 2525033 2526037 -26478619 + MICROPIA_I LTR Gypsy 1775 2771 -1705 7 604 1652 170 25 5 chrUextra 2526139 2526702 -26477954 + SAR_DM Satellite Satellite 1 574 -417 7 604 2051 159 35 9 chrUextra 2526719 2527144 -26477512 + SAR_DM Satellite Satellite 536 971 -501 7 604 2492 132 25 20 chrUextra 2527252 2528248 -26476408 + DMSAT6 Satellite Satellite 1 1001 -3 7 604 3574 218 20 21 chrUextra 2528360 2529354 -26475302 + SAR_DM Satellite Satellite 1 992 -225 7 604 5237 54 3 19 chrUextra 2529454 2530459 -26474197 + STALKER4_I LTR Gypsy 14 1119 -5411 7 604 3713 12 0 5 chrUextra 2530559 2530988 -26473668 + DOC LINE Jockey 4293 4719 -6 7 604 1820 237 155 5 chrUextra 2530983 2531563 -26473093 + BS LINE Jockey 2060 2726 -2400 7 604 1683 26 0 0 chrUextra 2531664 2531854 -26472802 - Invader2_LTR LTR Gypsy -76 190 1 7 604 7212 23 0 0 chrUextra 2531854 2532667 -26471989 + DMCR1A LINE CR1 3459 4271 -199 7 604 4882 27 12 0 chrUextra 2532771 2533332 -26471324 + R1_DM LINE R1 4789 5356 0 7 604 3214 61 5 5 chrUextra 2533365 2533774 -26470882 + R1_DM LINE R1 1 409 -4947 7 604 4087 201 12 20 chrUextra 2534979 2535984 -26468672 + SAR_DM Satellite Satellite 209 1205 -267 7 604 901 36 0 0 chrUextra 2536084 2536196 -26468460 + ARS406_DM Unknown Unknown 78 189 -164 7 604 3974 189 23 23 chrUextra 2536105 2537088 -26467568 - SAR_DM Satellite Satellite -216 1256 274 7 604 4547 6 8 2 chrUextra 2537188 2537697 -26466959 - DOC LINE Jockey -2390 2335 1824 7 604 1052 102 0 11 chrUextra 2537711 2537890 -26466766 + (TTA)n Simple_repeat Simple_repeat 1 177 0 7 604 3925 30 86 1 chrUextra 2538292 2539187 -26465469 - R1_DM LINE R1 -2115 3241 2271 7 604 464 0 0 0 chrUextra 2539180 2539230 -26465426 + CIRCE LINE Composite 4931 4980 -1376 7 604 950 137 0 0 chrUextra 2539396 2539549 -26465107 + ARS406_DM Unknown Unknown 37 189 -164 7 604 3666 205 33 29 chrUextra 2539438 2540389 -26464267 - SAR_DM Satellite Satellite -198 1274 321 7 604 1340 6 90 0 chrUextra 2540906 2541062 -26463594 + PROTOP_B DNA P 1 170 -983 7 604 1762 147 49 18 chrUextra 2541060 2541386 -26463270 + TART LINE telomeric 3548 3883 -10594 7 604 870 99 0 37 chrUextra 2541366 2541502 -26463154 + TART LINE telomeric 5323 5453 -9024 7 604 3997 192 24 25 chrUextra 2541604 2542608 -26462048 - SAR_DM Satellite Satellite -400 1072 70 7 604 2469 93 3 52 chrUextra 2542710 2543711 -26460945 - DMSAT6 Satellite Satellite -28 951 1 7 604 4471 108 111 29 chrUextra 2543812 2544815 -26459841 - STALKER4_I LTR Gypsy -5113 1417 297 7 604 8444 33 20 0 chrUextra 2544915 2545918 -26458738 - R1_DM LINE R1 -1812 3544 2522 7 604 3499 3 0 0 chrUextra 2546018 2546393 -26458263 - R2_DM LINE R2 -32 3575 3201 7 604 5821 9 0 0 chrUextra 2546386 2547021 -26457635 - R2_DM LINE R2 -594 3013 2379 7 604 2402 116 5 55 chrUextra 2547121 2547505 -26457151 + Gypsy12_LTR LTR Gypsy 1949 2313 -23 7 604 813 239 226 31 chrUextra 2547529 2547888 -26456768 + TAHRE LINE telomeric 9871 10299 -164 7 604 787 34 220 8 chrUextra 2548006 2548124 -26456532 + PROTOP_B DNA P 1 143 -1010 7 604 868 28 65 0 chrUextra 2548224 2548332 -26456324 + TART LINE telomeric 7608 7722 -6755 7 604 549 55 0 0 chrUextra 2548332 2548405 -26456251 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 7 604 2204 8 0 0 chrUextra 2548405 2548659 -26455997 + TART LINE telomeric 7786 8039 -6438 7 604 4245 70 0 0 chrUextra 2548656 2549227 -26455429 + TART_B1 LINE telomeric 1095 1665 -8989 7 604 2591 111 16 25 chrUextra 2549328 2550330 -26454326 - DMSAT6 Satellite Satellite -23 993 1 7 604 3155 9 0 0 chrUextra 2550551 2550895 -26453761 - BS LINE Jockey -1 5125 4782 7 604 3375 23 0 0 chrUextra 2551045 2551433 -26453223 + Gypsy4_I LTR Gypsy 374 761 -5527 7 604 720 43 0 0 chrUextra 2551533 2551626 -26453030 - BATUMI_I LTR Pao -568 7395 7303 7 604 2544 40 9 9 chrUextra 2551649 2551974 -26452682 + BATUMI_I LTR Pao 6427 6751 -1212 7 604 4773 21 3 11 chrUextra 2551967 2552536 -26452120 - BATUMI_I LTR Pao -4489 3474 2910 7 604 3194 0 2 10 chrUextra 2552636 2553045 -26451611 + HMSBEAGLE_I LTR Gypsy 382 787 -5742 7 604 891 38 49 12 chrUextra 2553063 2553225 -26451431 + (TTA)n Simple_repeat Simple_repeat 3 170 0 7 604 3699 0 2 2 chrUextra 2553225 2553639 -26451017 + HMSBEAGLE_I LTR Gypsy 976 1389 -5140 7 604 1074 0 0 0 chrUextra 2553739 2553861 -26450795 - QUASIMODO_LTR LTR Gypsy -535 123 2 7 604 429 0 49 0 chrUextra 2553861 2553922 -26450734 + (TA)n Simple_repeat Simple_repeat 1 64 0 7 604 814 138 55 65 chrUextra 2553922 2554123 -26450533 - ROVER-LTR_DM LTR Gypsy -1 366 168 7 604 728 163 75 53 chrUextra 2554179 2554406 -26450250 - ROVER-I_DM LTR Gypsy -6222 362 131 7 604 189 0 0 0 chrUextra 2554435 2554456 -26450200 + (T)n Simple_repeat Simple_repeat 1 21 0 7 604 431 165 13 0 chrUextra 2554498 2554577 -26450079 - ROVER-I_DM LTR Gypsy -6504 80 1 7 604 590 138 67 79 chrUextra 2554577 2554742 -26449914 - ROVER-LTR_DM LTR Gypsy 0 367 205 7 604 3746 32 0 5 chrUextra 2554842 2555277 -26449379 + R1_DM LINE R1 4924 5356 0 7 604 3621 62 27 11 chrUextra 2555310 2555845 -26448811 + R1_DM LINE R1 1 619 -4737 7 604 3426 29 0 0 chrUextra 2556164 2556549 -26448107 - DIVER2_LTR LTR Pao 0 385 1 7 604 3471 25 2 0 chrUextra 2556549 2556948 -26447708 - DIVER2_I LTR Pao 0 4147 3748 7 604 8523 41 2 0 chrUextra 2557048 2558045 -26446611 + G5_DM LINE Jockey 52 1050 -3806 7 604 2679 271 20 25 chrUextra 2558150 2559152 -26445504 + Copia_I LTR Copia 3203 4199 -394 7 604 8475 24 19 21 chrUextra 2559252 2560254 -26444402 + Gypsy12_LTR LTR Gypsy 61 1060 -1276 7 604 2256 41 0 7 chrUextra 2560354 2560623 -26444033 + R1_DM LINE R1 5090 5356 0 7 604 5577 57 3 4 chrUextra 2560657 2561356 -26443300 + R1_DM LINE R1 1 698 -4658 7 604 8370 30 22 0 chrUextra 2561456 2562458 -26442198 + MDG1_I LTR Gypsy 1884 2907 -3689 7 604 2481 4 0 0 chrUextra 2562558 2562829 -26441827 - HMSBEAGLE_I LTR Gypsy -6258 271 1 7 604 2474 8 0 0 chrUextra 2562828 2563094 -26441562 - DMLTR5 LTR Gypsy 0 266 1 7 604 3433 8 0 0 chrUextra 2563094 2563466 -26441190 - ROO_I LTR Pao -7884 372 1 7 604 836 0 0 0 chrUextra 2563466 2563560 -26441096 - ROO_LTR LTR Pao 0 428 335 7 604 4433 6 0 0 chrUextra 2563660 2564158 -26440498 + QUASIMODO_I LTR Gypsy 2450 2947 -3113 7 604 457 112 0 91 chrUextra 2564155 2564243 -26440413 + TRANSIB3 DNA Transib 791 870 -2013 7 604 561 29 43 0 chrUextra 2564224 2564294 -26440362 + TRANSIB3 DNA Transib 2808 2880 -3 7 604 470 260 82 39 chrUextra 2564360 2564592 -26440064 + Copia_I LTR Copia 3486 3727 -866 7 604 747 209 6 19 chrUextra 2565293 2565449 -26439207 - HETRP_DM Satellite Satellite -190 1682 1529 7 604 676 197 13 32 chrUextra 2565602 2565759 -26438897 - HETRP_DM Satellite Satellite -190 1682 1529 7 604 2496 109 9 30 chrUextra 2565864 2566866 -26437790 + DMSAT6 Satellite Satellite 1 980 -28 7 604 1932 14 0 5 chrUextra 2566966 2567182 -26437474 + Invader1_LTR LTR Gypsy 209 423 0 7 604 528 241 7 29 chrUextra 2567185 2567322 -26437334 - HETRP_DM Satellite Satellite -190 1682 1549 7 604 534 16 0 0 chrUextra 2567322 2567385 -26437271 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 604 735 184 11 69 chrUextra 2567501 2567676 -26436980 - HETRP_DM Satellite Satellite -190 1682 1518 7 604 464 226 8 17 chrUextra 2567824 2567941 -26436715 - HETRP_DM Satellite Satellite -208 1664 1549 7 604 222 37 0 0 chrUextra 2567941 2567968 -26436688 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 604 23 68 0 0 chrUextra 2568154 2568198 -26436458 + AT_rich Low_complexity Low_complexity 1 44 0 7 604 1755 267 93 29 chrUextra 2568206 2569070 -26435586 + Copia_I LTR Copia 1102 2020 -2573 7 604 4098 182 24 22 chrUextra 2569197 2570172 -26434484 - SAR_DM Satellite Satellite -411 976 1 7 604 926 185 33 22 chrUextra 2570272 2570627 -26434029 + SAR_DM Satellite Satellite 1 358 -1040 7 604 1077 176 26 12 chrUextra 2570638 2571273 -26433383 + SAR_DM Satellite Satellite 1 643 -680 7 604 2615 112 14 25 chrUextra 2571373 2572374 -26432282 + DMSAT6 Satellite Satellite 1 990 -29 7 604 1087 175 35 11 chrUextra 2572477 2573475 -26431181 - SAR_DM Satellite Satellite -810 1021 1 7 604 7901 39 3 2 chrUextra 2573575 2574576 -26430080 + STALKER4_I LTR Gypsy 5447 6448 -82 7 604 1160 21 107 0 chrUextra 2574767 2574907 -26429749 + PROTOP_B DNA P 1 155 -998 7 604 5781 85 25 12 chrUextra 2574905 2575677 -26428979 + Gypsy12_I LTR Gypsy 4657 5438 -108 7 604 1051 39 0 180 chrUextra 2575777 2575966 -26428690 + DMCR1A LINE CR1 2896 3050 -1420 7 604 3267 128 144 2 chrUextra 2575980 2576778 -26427878 - DOC LINE Jockey -1559 3166 2256 7 604 3741 70 120 10 chrUextra 2576878 2577879 -26426777 - R1_DM LINE R1 -4125 1231 42 7 604 3884 181 17 21 chrUextra 2577979 2578968 -26425688 + SAR_DM Satellite Satellite 1 984 -677 7 604 459 280 86 0 chrUextra 2579087 2579262 -26425394 - OSVALDO_I LTR Gypsy -4597 2056 1867 7 604 359 110 173 27 chrUextra 2579233 2579308 -26425348 - Gypsy8_I LTR Gypsy -3330 1017 932 7 604 1515 88 15 0 chrUextra 2579297 2579501 -26425155 - Gypsy8_I LTR Gypsy -3867 480 274 7 604 2368 72 2 58 chrUextra 2579506 2580081 -26424575 + DMSAT6 Satellite Satellite 1 542 -3 7 604 34 0 0 0 chrUextra 2580689 2580723 -26423933 + AT_rich Low_complexity Low_complexity 1 34 0 7 604 2288 25 94 0 chrUextra 2580858 2581135 -26423521 + PROTOP DNA P 1 303 -4177 7 604 360 62 0 0 chrUextra 2581134 2581182 -26423474 + PROTOP_B DNA P 336 383 -770 7 604 2500 111 97 112 chrUextra 2581282 2581820 -26422836 - TART LINE telomeric -6963 7514 6985 7 604 1127 165 70 47 chrUextra 2581818 2582278 -26422378 - TART LINE telomeric -3814 10663 9968 7 604 868 15 3 25 chrUextra 2582383 2582511 -26422145 + MDG1_I LTR Gypsy 6484 6596 0 7 604 423 100 0 0 chrUextra 2582515 2582585 -26422071 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 604 3132 20 0 0 chrUextra 2582585 2582941 -26421715 + MDG1_LTR LTR Gypsy 87 442 0 7 604 4058 9 0 0 chrUextra 2582941 2583384 -26421272 - MDG1_I LTR Gypsy -2587 4009 3567 7 604 8590 30 13 2 chrUextra 2583484 2584485 -26420171 - R1_DM LINE R1 -1237 4119 3108 7 604 6942 25 17 7 chrUextra 2584585 2585398 -26419258 + R1_DM LINE R1 4246 5066 -290 7 604 1002 35 0 0 chrUextra 2585395 2585509 -26419147 + R1_DM LINE R1 5243 5356 0 7 604 373 23 0 0 chrUextra 2585542 2585585 -26419071 + R1_DM LINE R1 1 43 -5313 7 604 7997 34 1 6 chrUextra 2585686 2586680 -26417976 + IDEFIX_I LTR Gypsy 2843 3831 -1797 7 604 1069 148 15 5 chrUextra 2586799 2587002 -26417654 - NTS_DM Other Other -35 205 1 7 604 283 125 21 0 chrUextra 2587084 2587132 -26417524 - NTS_DM Other Other -191 49 1 7 604 1141 142 29 21 chrUextra 2587132 2587370 -26417286 - NTS_DM Other Other 0 240 1 7 604 241 119 24 0 chrUextra 2587460 2587502 -26417154 - NTS_DM Other Other -191 49 7 7 604 437 129 70 39 chrUextra 2587508 2587637 -26417019 - NTS_DM Other Other 0 240 108 7 604 886 108 0 0 chrUextra 2587645 2587775 -26416881 - NTS_DM Other Other -103 137 8 7 604 5780 31 30 0 chrUextra 2587886 2588886 -26415770 - R1_DM LINE R1 -1968 3388 2324 7 604 437 95 155 0 chrUextra 2588986 2589070 -26415586 + TART_B1 LINE telomeric 2243 2339 -8315 7 604 4791 19 0 0 chrUextra 2589068 2589599 -26415057 + DMRT1A LINE R1 3602 4132 -1051 7 604 26 50 0 0 chrUextra 2589814 2589854 -26414802 + AT_rich Low_complexity Low_complexity 1 40 0 7 604 808 41 0 0 chrUextra 2589889 2589986 -26414670 + ROO_LTR LTR Pao 1 97 -331 7 604 8075 40 13 1 chrUextra 2590086 2591086 -26413570 - MDG1_I LTR Gypsy -1185 5411 4400 7 604 2305 29 33 0 chrUextra 2591186 2591461 -26413195 + R1_DM LINE R1 4783 5066 -290 7 604 1010 35 0 0 chrUextra 2591458 2591572 -26413084 + R1_DM LINE R1 5243 5356 0 7 604 4672 57 3 3 chrUextra 2591605 2592186 -26412470 + R1_DM LINE R1 1 581 -4775 7 604 22 35 0 0 chrUextra 2592449 2592478 -26412178 + AT_rich Low_complexity Low_complexity 1 29 0 7 604 45 62 0 0 chrUextra 2592565 2592645 -26412011 + AT_rich Low_complexity Low_complexity 1 80 0 7 604 182 59 0 81 chrUextra 2592646 2592683 -26411973 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 7 604 359 0 0 0 chrUextra 2592699 2592739 -26411917 + STALKER4_I LTR Gypsy 6491 6530 0 7 604 2941 23 63 0 chrUextra 2592739 2592940 -26411716 + Stalker3_LTR LTR Gypsy 1 201 -171 7 604 207 0 0 0 chrUextra 2592940 2592963 -26411693 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 604 2941 23 63 0 chrUextra 2592963 2593111 -26411545 + Stalker3_LTR LTR Gypsy 202 370 -2 7 604 306 118 0 38 chrUextra 2593111 2593164 -26411492 + Stalker2_I LTR Gypsy 1 51 -7351 7 604 2989 43 6 0 chrUextra 2593386 2593737 -26410919 + BATUMI_I LTR Pao 6068 6420 -1543 7 604 4339 58 9 10 chrUextra 2593763 2594339 -26410317 - BATUMI_I LTR Pao -962 7001 6427 7 604 235 111 0 0 chrUextra 2594350 2594386 -26410270 + BATUMI_I LTR Pao 7303 7338 -625 7 604 21 0 0 0 chrUextra 2594566 2594587 -26410069 + AT_rich Low_complexity Low_complexity 1 21 0 7 604 357 262 118 100 chrUextra 2594695 2594975 -26409681 - Invader1_LTR LTR Gypsy -55 368 84 7 604 959 178 102 15 chrUextra 2595184 2595389 -26409267 + DMLTR5 LTR Gypsy 44 266 0 7 604 379 49 65 16 chrUextra 2595388 2595450 -26409206 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 7 604 684 197 13 26 chrUextra 2595668 2595824 -26408832 + HETRP_DM Satellite Satellite 1529 1682 -190 7 604 652 200 7 15 chrUextra 2595943 2596080 -26408576 + HETRP_DM Satellite Satellite 1529 1664 -208 7 604 699 193 7 14 chrUextra 2596225 2596367 -26408289 + HETRP_DM Satellite Satellite 1529 1669 -203 7 604 459 171 0 12 chrUextra 2596503 2596586 -26408070 + HETRP_DM Satellite Satellite 1529 1610 -262 7 604 8670 19 10 1 chrUextra 2596686 2597686 -26406970 - R1_DM LINE R1 -1192 4164 3156 7 604 2303 114 42 10 chrUextra 2597786 2598192 -26406464 + DMSAT6 Satellite Satellite 48 466 -4 7 604 2636 106 16 26 chrUextra 2598213 2598786 -26405870 + DMSAT6 Satellite Satellite 1 566 0 7 604 8755 16 8 0 chrUextra 2598907 2599886 -26404770 - G2_DM LINE Jockey -1810 1292 306 7 604 798 66 0 9 chrUextra 2599986 2600093 -26404563 - BATUMI_I LTR Pao -7857 106 1 7 604 2149 35 3 34 chrUextra 2600093 2600386 -26404270 - BATUMI_I LTR Pao -679 7284 7001 7 604 2059 202 59 61 chrUextra 2600380 2600986 -26403670 - TAHRE LINE telomeric -9781 682 78 7 604 3729 169 16 9 chrUextra 2601087 2602086 -26402570 + SAR_DM Satellite Satellite 1 1005 -425 7 604 8424 34 15 1 chrUextra 2602186 2603185 -26401471 + R1_DM LINE R1 3093 4105 -1251 7 604 4871 35 20 74 chrUextra 2603285 2603991 -26400665 - NINJA_I LTR Pao -5343 668 1 7 604 2300 39 21 11 chrUextra 2603992 2604277 -26400379 - NINJA_LTR LTR Pao -1 316 29 7 604 2436 120 26 36 chrUextra 2604396 2605373 -26399283 + DMSAT6 Satellite Satellite 1 967 -3 7 604 4947 6 4 0 chrUextra 2605483 2606029 -26398627 + QUASIMODO_LTR LTR Gypsy 111 658 0 7 604 835 280 18 28 chrUextra 2606029 2606477 -26398179 - DM412 LTR Gypsy -3316 3581 3200 7 604 2196 201 32 4 chrUextra 2606591 2607581 -26397075 - SAR_DM Satellite Satellite -436 1018 1 7 604 4073 205 10 25 chrUextra 2607686 2608680 -26395976 - SAR_DM Satellite Satellite -353 978 1 7 604 2954 129 6 16 chrUextra 2608780 2609270 -26395386 + TAHRE LINE telomeric 9979 10463 0 7 604 220 27 54 0 chrUextra 2609289 2609326 -26395330 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 7 604 1135 179 60 62 chrUextra 2609337 2609772 -26394884 + HETA LINE telomeric 19 452 -5629 7 604 9056 2 1 0 chrUextra 2609879 2610878 -26393778 - ACCORD_I LTR Gypsy -3105 3183 2184 7 604 37 39 0 0 chrUextra 2611185 2611236 -26393420 + AT_rich Low_complexity Low_complexity 1 51 0 7 604 22 35 0 0 chrUextra 2611337 2611366 -26393290 + AT_rich Low_complexity Low_complexity 1 29 0 7 604 21 57 0 0 chrUextra 2611526 2611561 -26393095 + AT_rich Low_complexity Low_complexity 1 35 0 7 604 2112 8 0 0 chrUextra 2611561 2611801 -26392855 + ALUII_DM Unknown Unknown 1 240 0 7 604 3355 181 28 25 chrUextra 2612077 2613071 -26391585 - SAR_DM Satellite Satellite -500 996 1 7 604 349 0 0 22 chrUextra 2613176 2613222 -26391434 - DOC2_DM LINE Jockey -2211 2582 2538 7 604 6252 60 32 13 chrUextra 2613240 2614175 -26390481 - DOC2_DM LINE Jockey -3099 1694 742 7 604 7053 33 22 41 chrUextra 2614275 2615274 -26389382 + BATUMI_I LTR Pao 2274 3253 -4710 7 604 3907 30 14 2 chrUextra 2615374 2615881 -26388775 + PROTOP_A DNA P 526 1038 -67 7 604 261 0 0 0 chrUextra 2615903 2615933 -26388723 + CIRCE LINE Composite 4951 4980 -1376 7 604 644 174 60 30 chrUextra 2616045 2616211 -26388445 - DNAREP1_DM LINE Penelope -336 258 88 7 604 904 51 185 0 chrUextra 2616211 2616368 -26388288 - PROTOP_B DNA P -250 903 718 7 604 8125 21 9 1 chrUextra 2616473 2617472 -26387184 + R1_DM LINE R1 2937 3943 -1413 7 604 5131 40 150 13 chrUextra 2617753 2618571 -26386085 + DIVER2_I LTR Pao 2417 3346 -801 7 604 1875 22 0 0 chrUextra 2618671 2618899 -26385757 + MDG3_I LTR Gypsy 2251 2478 -2508 7 604 26 0 0 0 chrUextra 2619372 2619398 -26385258 + AT_rich Low_complexity Low_complexity 1 26 0 7 604 3466 190 13 15 chrUextra 2619775 2620769 -26383887 + SAR_DM Satellite Satellite 1 991 -216 7 604 225 250 0 93 chrUextra 2620869 2620944 -26383712 + Gypsy7_I LTR Gypsy 3226 3293 -1691 7 605 24 53 0 0 chrUextra 2621445 2621483 -26383173 + AT_rich Low_complexity Low_complexity 1 38 0 7 605 1375 62 5 10 chrUextra 2621970 2622165 -26382491 - BATUMI_I LTR Pao -7769 194 1 7 605 1890 35 3 93 chrUextra 2622165 2622477 -26382179 - BATUMI_I LTR Pao -679 7284 7001 7 605 3599 49 0 4 chrUextra 2622472 2622967 -26381689 + ACCORD2_I LTR Gypsy 2718 3210 -4002 7 605 7734 19 37 3 chrUextra 2623067 2624066 -26380590 - STALKER4_I LTR Gypsy -485 6045 5013 7 605 3141 150 16 13 chrUextra 2624166 2625165 -26379491 + G2_DM LINE Jockey 4 1728 -314 7 605 6108 133 20 0 chrUextra 2625265 2626264 -26378392 + TAHRE LINE telomeric 1285 2303 -8160 7 605 1301 313 14 12 chrUextra 2626366 2626868 -26377788 - NINJA_I LTR Pao -4524 1487 985 7 605 28 48 0 0 chrUextra 2627665 2627707 -26376949 + AT_rich Low_complexity Low_complexity 1 42 0 7 605 562 92 35 0 chrUextra 2627980 2628067 -26376589 - NTS_DM Other Other -150 90 1 7 605 995 48 35 13 chrUextra 2628067 2628248 -26376408 - NTS_DM Other Other 0 240 26 7 605 246 150 0 0 chrUextra 2628325 2628365 -26376291 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 605 996 73 7 13 chrUextra 2628561 2628713 -26375943 - BATUMI_I LTR Pao -7812 151 1 7 605 1877 35 3 93 chrUextra 2628713 2629024 -26375632 - BATUMI_I LTR Pao -679 7284 7002 7 605 3126 53 1 16 chrUextra 2629061 2629501 -26375155 - STALKER4_LTR LTR Gypsy -3 399 1 7 605 1040 310 37 26 chrUextra 2629993 2630636 -26374020 - HMSBEAGLE_I LTR Gypsy -757 5772 5123 7 605 51 31 0 0 chrUextra 2631218 2631283 -26373373 + AT_rich Low_complexity Low_complexity 1 65 0 7 605 404 0 0 0 chrUextra 2631707 2631755 -26372901 - Invader1_LTR LTR Gypsy 0 423 376 7 605 2399 3 10 0 chrUextra 2631855 2632143 -26372513 - MDG3_I LTR Gypsy -4695 291 1 7 605 2295 4 0 0 chrUextra 2632142 2632409 -26372247 - MDG3_LTR LTR Gypsy 0 267 1 7 605 428 100 0 12 chrUextra 2632409 2632464 -26372192 + (TTCTC)n Simple_repeat Simple_repeat 2 56 0 7 605 1323 50 0 0 chrUextra 2632464 2632644 -26372012 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 7 605 428 100 0 12 chrUextra 2632644 2632669 -26371987 + (TTCTC)n Simple_repeat Simple_repeat 2 26 0 7 605 1389 39 0 0 chrUextra 2632669 2632849 -26371807 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 7 605 21 57 0 0 chrUextra 2632971 2633006 -26371650 + AT_rich Low_complexity Low_complexity 1 35 0 7 605 1156 24 0 24 chrUextra 2633006 2633175 -26371481 - NTS_DM Other Other -38 202 38 7 605 870 9 0 27 chrUextra 2633175 2633287 -26371369 - NTS_DM Other Other -107 133 25 7 605 1215 18 6 6 chrUextra 2633340 2633504 -26371152 - NTS_DM Other Other -39 201 38 7 605 870 9 0 27 chrUextra 2633504 2633616 -26371040 - NTS_DM Other Other -107 133 25 7 605 1222 18 0 12 chrUextra 2633668 2633834 -26370822 - NTS_DM Other Other -39 201 38 7 605 720 9 0 68 chrUextra 2633834 2633951 -26370705 - NTS_DM Other Other -107 133 25 7 605 8058 25 21 1 chrUextra 2634051 2635049 -26369607 - R1_DM LINE R1 -1246 4110 3093 7 605 4761 27 82 0 chrUextra 2635149 2635775 -26368881 + NINJA_I LTR Pao 1900 2576 -3435 7 605 291 215 0 0 chrUextra 2635789 2635854 -26368802 + Invader5_I LTR Gypsy 962 1026 -2308 7 605 569 306 12 8 chrUextra 2635890 2636147 -26368509 + MICROPIA_I LTR Gypsy 1897 2154 -2322 7 605 4467 17 15 5 chrUextra 2636247 2636850 -26367806 + Invader2_I LTR Gypsy 3984 4592 0 7 605 2209 26 0 0 chrUextra 2636850 2637116 -26367540 + Invader2_LTR LTR Gypsy 1 266 0 7 605 368 156 41 20 chrUextra 2637122 2637220 -26367436 + Gypsy12A_LTR LTR Gypsy 1634 1733 -547 7 605 1305 45 11 6 chrUextra 2637345 2637523 -26367133 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 7 605 651 150 28 23 chrUextra 2637539 2637716 -26366940 + GA-rich Low_complexity Low_complexity 1 178 0 7 605 4649 142 14 13 chrUextra 2638445 2639218 -26365438 - Gypsy3_I LTR Gypsy -4479 1698 925 7 605 4213 2 0 0 chrUextra 2639541 2640023 -26364633 - DOC LINE Jockey -4239 486 5 7 605 26 64 0 0 chrUextra 2640032 2640079 -26364577 + AT_rich Low_complexity Low_complexity 1 47 0 7 605 28 48 0 0 chrUextra 2640239 2640281 -26364375 + AT_rich Low_complexity Low_complexity 1 42 0 7 605 7459 44 32 7 chrUextra 2640639 2641637 -26363019 - R1_DM LINE R1 -3798 1558 536 7 605 3966 2 2 6 chrUextra 2641737 2642218 -26362438 + DOC LINE Jockey 4244 4722 -3 7 605 1543 87 0 5 chrUextra 2642515 2642735 -26361921 - DMRT1B LINE R1 -2 5181 4963 7 605 7765 31 7 9 chrUextra 2642835 2643833 -26360823 + BATUMI_I LTR Pao 1530 2525 -5438 7 605 4362 117 95 18 chrUextra 2643998 2644929 -26359727 - TART LINE telomeric -6799 7678 6876 7 605 1554 31 0 4 chrUextra 2645034 2645258 -26359398 + (TTCTC)n Simple_repeat Simple_repeat 1 223 0 7 605 1897 165 74 97 chrUextra 2645258 2646029 -26358627 + BATUMI_I LTR Pao 341 1093 -6870 7 605 3761 203 12 18 chrUextra 2646129 2647123 -26357533 + SAR_DM Satellite Satellite 261 1248 -224 7 605 2224 182 12 9 chrUextra 2647238 2648223 -26356433 - SAR_DM Satellite Satellite -397 987 1 7 605 316 178 50 108 chrUextra 2648371 2648491 -26356165 - Copia_I LTR Copia -80 4513 4401 7 605 22 56 0 0 chrUextra 2648536 2648572 -26356084 + AT_rich Low_complexity Low_complexity 1 36 0 7 605 2217 157 104 11 chrUextra 2648718 2649313 -26355343 + TART LINE telomeric 8952 9537 -4940 7 605 7114 18 1 0 chrUextra 2649420 2650274 -26354382 + STALKER4_I LTR Gypsy 3936 4790 -1740 7 605 625 60 0 0 chrUextra 2650269 2650352 -26354304 - STALKER4_LTR LTR Gypsy -319 83 1 7 605 410 46 123 0 chrUextra 2650352 2650417 -26354239 - STALKER4_I LTR Gypsy 0 6530 6458 7 605 4651 27 116 1 chrUextra 2650517 2651359 -26353297 + DMRT1B LINE R1 3764 4702 -481 7 605 1248 32 0 0 chrUextra 2651358 2651514 -26353142 + DOC2_DM LINE Jockey 3447 3602 -1191 7 605 291 255 0 31 chrUextra 2651616 2651713 -26352943 - Gypsy12_LTR LTR Gypsy -1564 772 679 7 605 1920 200 69 53 chrUextra 2651773 2652323 -26352333 - Gypsy12_LTR LTR Gypsy -1777 559 1 7 605 2156 80 0 3 chrUextra 2652322 2652611 -26352045 - Gypsy12_I LTR Gypsy 0 5546 5259 7 605 276 51 26 0 chrUextra 2652711 2652750 -26351906 + ARS406_DM Unknown Unknown 150 189 -164 7 605 2693 183 16 6 chrUextra 2652718 2653351 -26351305 - SAR_DM Satellite Satellite -625 847 209 7 605 1439 166 39 15 chrUextra 2653367 2653704 -26350952 - SAR_DM Satellite Satellite -729 743 399 7 605 4620 36 11 44 chrUextra 2653808 2654472 -26350184 - DOC2_DM LINE Jockey -3769 1024 383 7 605 1002 292 0 6 chrUextra 2654454 2654805 -26349851 - TOM_I LTR Gypsy -890 5222 4874 7 605 707 168 19 0 chrUextra 2655317 2655472 -26349184 + DNAREP1_DM LINE Penelope 82 239 -355 7 605 1288 185 53 110 chrUextra 2655447 2655902 -26348754 + DNAREP1_DM LINE Penelope 128 556 -38 7 605 549 315 16 46 chrUextra 2656069 2656375 -26348281 + HMSBEAGLE_I LTR Gypsy 2650 2946 -3583 7 605 1849 255 8 6 chrUextra 2656472 2656996 -26347660 + HMSBEAGLE_I LTR Gypsy 3101 3625 -2904 7 605 3366 182 13 19 chrUextra 2657099 2657224 -26347432 - SAR_DM Satellite Satellite -731 987 854 7 605 317 202 13 0 chrUextra 2657224 2657303 -26347353 + XDMR Unknown Unknown 282 361 0 7 605 3366 182 13 19 chrUextra 2657303 2658093 -26346563 - SAR_DM Satellite Satellite -731 853 1 7 605 3260 194 40 27 chrUextra 2658198 2659193 -26345463 + SAR_DM Satellite Satellite 1 1008 -208 7 605 4620 138 51 20 chrUextra 2660395 2661387 -26343269 - TART LINE telomeric -4466 10011 8989 7 605 487 158 16 8 chrUextra 2661487 2661608 -26343048 + PROTOP_B DNA P 327 448 -705 7 605 507 141 287 0 chrUextra 2661647 2661818 -26342838 - DNAREP1_DM LINE Penelope -199 395 176 7 605 25 0 0 0 chrUextra 2661920 2661945 -26342711 + AT_rich Low_complexity Low_complexity 1 25 0 7 605 3257 43 86 4 chrUextra 2662015 2662481 -26342175 + IDEFIX_LTR LTR Gypsy 1 504 -90 7 605 8219 13 1 8 chrUextra 2662583 2663579 -26341077 - FW_DM LINE Jockey -1856 2836 1848 7 605 7976 30 4 1 chrUextra 2663679 2664675 -26339981 - R1_DM LINE R1 -1325 4031 3033 7 605 2298 112 20 20 chrUextra 2664802 2665256 -26339400 + DMSAT6 Satellite Satellite 17 470 0 7 605 2036 118 65 9 chrUextra 2665289 2665734 -26338922 + DMSAT6 Satellite Satellite 1 470 0 7 605 639 38 123 143 chrUextra 2666205 2666359 -26338297 + PROTOP_B DNA P 328 478 -675 7 605 312 95 111 0 chrUextra 2666343 2666406 -26338250 + HOBO DNA hAT 330 399 -2617 7 605 359 73 44 89 chrUextra 2666405 2666495 -26338161 + HOBO DNA hAT 2337 2422 -594 7 605 24 0 0 0 chrUextra 2666495 2666519 -26338137 + AT_rich Low_complexity Low_complexity 1 24 0 7 605 1484 116 12 79 chrUextra 2666538 2666866 -26337790 + HOBO DNA hAT 2428 2733 -283 7 605 2753 137 4 11 chrUextra 2666967 2667439 -26337217 + TAHRE LINE telomeric 9995 10463 0 7 605 2946 168 17 0 chrUextra 2667438 2667963 -26336693 + HETA LINE telomeric 1450 1983 -4098 7 605 417 39 0 0 chrUextra 2668063 2668114 -26336542 + MDG3_LTR LTR Gypsy 217 267 0 7 605 8303 6 15 6 chrUextra 2668113 2669059 -26335597 + MDG3_I LTR Gypsy 1 954 -4032 7 605 2444 203 38 39 chrUextra 2669159 2670149 -26334507 - SAR_DM Satellite Satellite -691 988 1 7 605 6959 73 34 3 chrUextra 2670255 2671251 -26333405 - IDEFIX_I LTR Gypsy -1145 4483 3457 7 605 276 30 0 0 chrUextra 2671363 2671396 -26333260 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 605 646 207 14 14 chrUextra 2671522 2671669 -26332987 - HETRP_DM Satellite Satellite -197 1675 1529 7 605 496 226 82 7 chrUextra 2671812 2671959 -26332697 - HETRP_DM Satellite Satellite -197 1675 1518 7 605 369 214 87 10 chrUextra 2672093 2672197 -26332459 + DNAREP1_DM LINE Penelope 67 178 -416 7 605 774 84 42 0 chrUextra 2672447 2672566 -26332090 + IDEFIX_I LTR Gypsy 741 864 -4764 7 605 6808 49 5 0 chrUextra 2672583 2673443 -26331213 + IDEFIX_I LTR Gypsy 2190 3053 -2575 7 605 353 0 0 65 chrUextra 2673543 2673589 -26331067 - NTS_DM Other Other -173 67 25 7 605 1304 18 0 6 chrUextra 2673641 2673806 -26330850 - NTS_DM Other Other -39 201 38 7 605 907 9 0 27 chrUextra 2673806 2673918 -26330738 - NTS_DM Other Other -107 133 25 7 605 2604 130 7 9 chrUextra 2673943 2674531 -26330125 - G6_DM LINE Jockey 0 2042 1739 7 605 8321 33 9 1 chrUextra 2674639 2675635 -26329021 - R1_DM LINE R1 -3251 2105 1102 7 605 4240 177 18 25 chrUextra 2675735 2676726 -26327930 - SAR_DM Satellite Satellite -243 1229 246 7 605 323 67 0 0 chrUextra 2676686 2676731 -26327925 + ARS406_DM Unknown Unknown 1 45 -308 7 605 6007 84 80 39 chrUextra 2677928 2678923 -26325733 + HETA LINE telomeric 511 1546 -4535 7 605 8791 10 0 0 chrUextra 2679028 2680019 -26324637 + BS LINE Jockey 524 1514 -3612 7 605 1060 77 0 6 chrUextra 2680119 2680275 -26324381 + ARS406_DM Unknown Unknown 35 189 -164 7 605 3674 195 21 26 chrUextra 2680171 2681114 -26323542 - SAR_DM Satellite Satellite -203 1269 332 7 605 881 334 24 22 chrUextra 2681218 2681766 -26322890 - HMSBEAGLE_I LTR Gypsy -1971 4558 4010 7 605 1687 269 5 0 chrUextra 2681764 2682210 -26322446 - HMSBEAGLE_I LTR Gypsy -2732 3797 3350 7 605 21 0 0 0 chrUextra 2683105 2683126 -26321530 + AT_rich Low_complexity Low_complexity 1 21 0 7 605 661 147 0 0 chrUextra 2683405 2683514 -26321142 - Gypsy5_I LTR Gypsy -2086 4423 4315 7 605 5292 161 1 1 chrUextra 2683514 2684400 -26320256 - Gypsy5_I LTR Gypsy -2512 3997 3112 7 605 180 0 0 0 chrUextra 2684883 2684903 -26319753 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 605 483 18 0 0 chrUextra 2685190 2685246 -26319410 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 605 550 345 63 23 chrUextra 2685609 2686007 -26318649 + MICROPIA_I LTR Gypsy 1896 2309 -2167 7 605 577 324 72 28 chrUextra 2686002 2686475 -26318181 + MICROPIA_I LTR Gypsy 3487 3980 -496 7 605 2348 106 23 36 chrUextra 2686708 2687180 -26317476 + DMSAT6 Satellite Satellite 5 470 0 7 605 2593 87 21 23 chrUextra 2687196 2687667 -26316989 + DMSAT6 Satellite Satellite 1 470 0 7 605 4062 17 0 0 chrUextra 2687785 2688256 -26316400 + Copia2_I LTR Copia 3692 4162 0 7 605 3745 15 37 63 chrUextra 2688284 2688773 -26315883 + MICROPIA_LTR LTR Gypsy 1 476 0 7 605 3549 18 73 2 chrUextra 2688880 2689317 -26315339 - PROTOP_A DNA P -637 468 1 7 605 4811 13 6 0 chrUextra 2689326 2689875 -26314781 - Copia2_I LTR Copia -1285 2877 2326 7 605 8441 20 5 2 chrUextra 2689975 2690970 -26313686 + R1_DM LINE R1 3373 4370 -986 7 605 8339 23 25 0 chrUextra 2691070 2692065 -26312591 + FW_DM LINE Jockey 2453 3472 -1220 7 605 3615 9 5 5 chrUextra 2692165 2692607 -26312049 + BURDOCK_I LTR Gypsy 9 450 -5410 7 605 5126 0 0 0 chrUextra 2692585 2693160 -26311496 + BURDOCK_I LTR Gypsy 4628 5202 -658 7 605 8059 25 3 7 chrUextra 2693260 2694255 -26310401 - STALKER4_I LTR Gypsy -4472 2058 1068 7 605 3405 3 0 0 chrUextra 2694355 2694731 -26309925 + NOMAD_LTR LTR Gypsy 143 518 0 7 605 4900 200 56 0 chrUextra 2695450 2696445 -26308211 + ROVER-I_DM LTR Gypsy 2729 3779 -2805 7 605 3839 197 21 29 chrUextra 2696546 2697537 -26307119 - SAR_DM Satellite Satellite -361 982 1 7 605 306 105 0 50 chrUextra 2697684 2697744 -26306912 - Stalker2_I LTR Gypsy -7345 57 1 7 605 345 25 0 0 chrUextra 2697744 2697771 -26306885 - STALKER4_I LTR Gypsy -6503 27 1 7 605 3543 5 2 2 chrUextra 2697771 2698173 -26306483 - STALKER4_LTR LTR Gypsy 0 402 1 7 605 2321 48 0 0 chrUextra 2698173 2698468 -26306188 + MAX_I LTR Pao 7087 7381 -533 7 605 1073 30 0 0 chrUextra 2698500 2698635 -26306021 + MAX_I LTR Pao 7381 7515 -399 7 605 8260 6 31 1 chrUextra 2698742 2699730 -26304926 + QUASIMODO_I LTR Gypsy 3746 4763 -1297 7 605 3980 193 11 14 chrUextra 2699830 2700825 -26303831 - SAR_DM Satellite Satellite -399 991 1 7 605 7310 58 3 2 chrUextra 2700925 2701920 -26302736 + G_DM LINE Jockey 805 1743 -299 7 605 1250 0 0 0 chrUextra 2703115 2703258 -26301398 - ZAM_I LTR Gypsy -7347 143 1 7 605 2327 41 7 7 chrUextra 2703258 2703552 -26301104 - ZAM_LTR LTR Gypsy 0 472 179 7 605 1804 31 5 0 chrUextra 2703540 2703763 -26300893 - ZAM_LTR LTR Gypsy -248 224 1 7 605 511 247 152 22 chrUextra 2703763 2703940 -26300716 - TAHRE LINE telomeric -457 10006 9807 7 605 929 147 6 6 chrUextra 2703947 2704104 -26300552 - Gypsy12A_LTR LTR Gypsy -18 2262 2106 7 605 4049 196 15 18 chrUextra 2704212 2705202 -26299454 + SAR_DM Satellite Satellite 224 1210 -262 7 605 3112 51 57 45 chrUextra 2705328 2705817 -26298839 - DM176_LTR LTR Gypsy -26 481 1 7 605 2001 84 36 0 chrUextra 2705818 2706092 -26298564 + DIVER2_I LTR Pao 156 439 -3708 7 605 3093 286 14 14 chrUextra 2706407 2707386 -26297270 + HMSBEAGLE_I LTR Gypsy 3344 4322 -2207 7 605 1119 30 0 0 chrUextra 2707932 2708067 -26296589 + (CTTAT)n Simple_repeat Simple_repeat 3 137 0 7 605 4536 8 30 0 chrUextra 2708587 2709581 -26295075 - DOC2_DM LINE Jockey -995 3798 2775 7 605 23 68 0 0 chrUextra 2710121 2710165 -26294491 + AT_rich Low_complexity Low_complexity 1 44 0 7 605 26 30 0 0 chrUextra 2710211 2710244 -26294412 + AT_rich Low_complexity Low_complexity 1 33 0 7 605 701 25 0 0 chrUextra 2710596 2710675 -26293981 - PROTOP_B DNA P 0 1153 1075 7 605 22 0 0 0 chrUextra 2711272 2711294 -26293362 + AT_rich Low_complexity Low_complexity 1 22 0 7 605 1560 129 260 13 chrUextra 2711314 2711691 -26292965 - DNAREP1_DM LINE Penelope -124 470 1 7 605 378 77 19 0 chrUextra 2712001 2712053 -26292603 - DOC4_DM LINE Jockey -245 2546 2494 7 605 2323 165 30 24 chrUextra 2712068 2712533 -26292123 + DMCR1A LINE CR1 1938 2405 -2065 7 605 761 250 107 11 chrUextra 2712592 2712863 -26291793 - BS LINE Jockey -1688 3438 3142 7 605 4002 191 22 17 chrUextra 2712963 2713921 -26290735 - SAR_DM Satellite Satellite -315 1157 195 7 605 774 108 8 0 chrUextra 2713828 2713957 -26290699 + ARS406_DM Unknown Unknown 1 130 -223 7 605 1620 18 0 0 chrUextra 2714057 2714441 -26290215 + (TTATA)n Simple_repeat Simple_repeat 1 384 0 7 605 5062 30 8 3 chrUextra 2714441 2715051 -26289605 + IVK_DM LINE I 1 613 -4789 7 605 3897 194 19 25 chrUextra 2715152 2716145 -26288511 + SAR_DM Satellite Satellite 1 987 -203 7 605 4927 19 0 2 chrUextra 2716245 2716826 -26287830 - QUASIMODO_I LTR Gypsy -3016 3044 2465 7 605 2497 44 3 25 chrUextra 2716826 2717149 -26287507 - NINJA_LTR LTR Pao -1 316 1 7 605 717 44 11 0 chrUextra 2717149 2717239 -26287417 - NINJA_I LTR Pao 0 6011 5921 7 605 2263 260 21 28 chrUextra 2717339 2718322 -26286334 + DM412 LTR Gypsy 2512 3563 -3334 7 605 21 89 0 0 chrUextra 2718466 2718522 -26286134 + AT_rich Low_complexity Low_complexity 1 56 0 7 605 29 47 0 0 chrUextra 2718560 2718603 -26286053 + AT_rich Low_complexity Low_complexity 1 43 0 7 605 34 65 0 0 chrUextra 2718649 2718711 -26285945 + AT_rich Low_complexity Low_complexity 1 62 0 7 605 1736 30 0 0 chrUextra 2719062 2719263 -26285393 - PROTOP DNA P 0 4480 4280 7 605 885 48 163 0 chrUextra 2719261 2719427 -26285229 - PROTOP_B DNA P -432 721 530 7 605 8346 1 92 1 chrUextra 2719527 2720521 -26284135 + MAX_I LTR Pao 580 1663 -6251 7 605 737 71 0 0 chrUextra 2720621 2720720 -26283936 - QUASIMODO_I LTR Gypsy -1713 4347 4249 7 605 2371 136 10 25 chrUextra 2720877 2721285 -26283371 - GTWIN_LTR LTR Gypsy -93 402 1 7 605 2700 36 0 0 chrUextra 2721285 2721615 -26283041 - QUASIMODO_I LTR Gypsy -1808 4252 3923 7 605 1598 33 0 99 chrUextra 2721737 2721970 -26282686 - DIVER2_I LTR Pao -2572 1575 1366 7 605 1151 135 69 168 chrUextra 2723002 2723301 -26281355 + HOBO DNA hAT 44 312 -2704 7 605 2024 97 200 17 chrUextra 2723301 2723705 -26280951 + PROTOP_B DNA P 1 478 -675 7 605 864 83 0 0 chrUextra 2723682 2723803 -26280853 + HOBO DNA hAT 330 450 -2566 7 605 6068 79 48 28 chrUextra 2723903 2724897 -26279759 + STALKER4_I LTR Gypsy 484 1561 -4969 7 605 9088 1 21 0 chrUextra 2724997 2725990 -26278666 - BARI_DM DNA Tc1 -42 1686 673 7 605 8783 16 14 0 chrUextra 2726090 2727083 -26277573 - FW_DM LINE Jockey -3599 1093 87 7 605 7777 11 7 2 chrUextra 2727183 2728063 -26276593 + DOC LINE Jockey 3836 4719 -6 7 605 234 247 133 10 chrUextra 2728061 2728159 -26276497 + ROVER-I_DM LTR Gypsy 1624 1733 -4851 7 605 4825 25 101 3 chrUextra 2728276 2728883 -26275773 + NINJA_I LTR Pao 5050 5715 -296 7 605 1173 8 0 0 chrUextra 2728887 2729015 -26275641 - PROTOP_A DNA P -977 128 1 7 605 2135 28 0 4 chrUextra 2729015 2729269 -26275387 + NINJA_I LTR Pao 5469 5721 -290 7 605 21 0 0 0 chrUextra 2729586 2729607 -26275049 + AT_rich Low_complexity Low_complexity 1 21 0 7 605 2130 105 0 0 chrUextra 2730542 2730847 -26273809 - Invader2_I LTR Gypsy -1580 3012 2708 7 605 2996 44 18 0 chrUextra 2730837 2731220 -26273436 - DOC5_DM LINE Jockey -4292 390 1 7 605 1017 35 0 0 chrUextra 2731230 2731346 -26273310 - G3_DM LINE Jockey -1096 3509 3394 7 605 760 42 0 30 chrUextra 2731356 2731455 -26273201 - G3_DM LINE Jockey -1662 2943 2848 7 605 631 195 0 0 chrUextra 2731555 2731683 -26272973 + Gypsy11_I LTR Gypsy 2979 3106 -418 7 605 40 0 0 0 chrUextra 2731694 2731734 -26272922 + AT_rich Low_complexity Low_complexity 1 40 0 7 605 282 255 103 48 chrUextra 2731765 2731930 -26272726 + DM412 LTR Gypsy 6696 6869 -28 7 605 1055 0 0 0 chrUextra 2731930 2732043 -26272613 - Gypsy2_LTR LTR Gypsy 0 353 241 7 605 4015 9 0 7 chrUextra 2732087 2732548 -26272108 - Gypsy2_I LTR Gypsy -175 5960 5503 7 605 3936 222 58 16 chrUextra 2732657 2734727 -26269929 - SAR_DM Satellite Satellite -203 2157 1 7 605 4307 179 19 30 chrUextra 2734838 2735825 -26268831 + SAR_DM Satellite Satellite 246 1221 -251 7 605 6614 88 54 9 chrUextra 2735927 2736919 -26267737 - BATUMI_I LTR Pao -1616 6298 5223 7 605 183 42 0 0 chrUextra 2737464 2737488 -26267168 + (A)n Simple_repeat Simple_repeat 1 24 0 7 605 23 54 0 0 chrUextra 2737754 2737791 -26266865 + AT_rich Low_complexity Low_complexity 1 37 0 7 605 2608 100 30 17 chrUextra 2738113 2739106 -26265550 - DMSAT6 Satellite Satellite -157 1005 1 7 605 8883 9 12 2 chrUextra 2739206 2740199 -26264457 - MDG1_I LTR Gypsy -1967 4629 3627 7 605 475 110 0 24 chrUextra 2740300 2740384 -26264272 + DMLTR5 LTR Gypsy 185 266 0 7 605 2201 90 46 23 chrUextra 2740383 2740734 -26263922 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 7 605 30 45 0 0 chrUextra 2740749 2740793 -26263863 + AT_rich Low_complexity Low_complexity 1 44 0 7 605 2168 129 70 6 chrUextra 2740947 2741289 -26263367 + HMSBEAGLE_I LTR Gypsy 1195 1558 -4971 7 605 4494 12 12 4 chrUextra 2741392 2741904 -26262752 - DMRT1A LINE R1 -2976 2207 1692 7 605 4039 52 0 0 chrUextra 2741885 2742385 -26262271 - TART LINE telomeric -11818 2659 2160 7 605 1192 63 6 6 chrUextra 2742485 2742661 -26261995 + (AATAG)n Simple_repeat Simple_repeat 2 177 0 7 605 239 196 18 0 chrUextra 2742661 2742717 -26261939 + (TATAA)n Simple_repeat Simple_repeat 3 59 0 7 605 1205 102 13 10 chrUextra 2742718 2743094 -26261562 + (AATAG)n Simple_repeat Simple_repeat 1 377 0 7 605 1458 56 0 16 chrUextra 2743107 2743477 -26261179 + (AATAG)n Simple_repeat Simple_repeat 1 363 0 7 605 4762 41 5 0 chrUextra 2743577 2744136 -26260520 - DIVER_I LTR Pao -5081 562 1 7 605 1316 103 0 118 chrUextra 2744157 2744411 -26260245 - DIVER_LTR LTR Pao 0 224 1 7 605 562 120 162 22 chrUextra 2744672 2744808 -26259848 + DNAREP1_DM LINE Penelope 117 271 -323 7 605 1017 125 54 0 chrUextra 2744810 2744978 -26259678 - DMCR1A LINE CR1 -171 4299 4123 7 605 313 262 220 55 chrUextra 2744951 2745169 -26259487 + Gypsy4_I LTR Gypsy 854 1107 -5181 7 605 293 188 62 0 chrUextra 2745312 2745376 -26259280 + Gypsy4_I LTR Gypsy 3517 3584 -2704 7 605 392 339 6 12 chrUextra 2745444 2745614 -26259042 + Gypsy4_I LTR Gypsy 4323 4491 -1797 7 605 8175 10 8 18 chrUextra 2745761 2746753 -26257903 + MAX_I LTR Pao 291 1272 -6642 7 605 1762 61 0 42 chrUextra 2746853 2747091 -26257565 + Gypsy4_LTR LTR Gypsy 60 287 0 7 605 599 230 0 0 chrUextra 2747219 2747345 -26257311 + Gypsy_I LTR Gypsy 6094 6219 -288 7 605 1305 205 48 64 chrUextra 2747347 2747784 -26256872 + Gypsy_LTR LTR Gypsy 33 462 -20 7 605 3970 197 14 19 chrUextra 2747945 2748937 -26255719 - SAR_DM Satellite Satellite -468 987 1 7 605 5971 10 36 4 chrUextra 2749037 2750029 -26254627 + BATUMI_I LTR Pao 4766 5789 -2174 7 605 3959 2 0 0 chrUextra 2750129 2750564 -26254092 + FW_DM LINE Jockey 4258 4692 0 7 605 1439 76 41 0 chrUextra 2750547 2750744 -26253912 + TRANSIB2 DNA Transib 2640 2844 0 7 605 2756 109 0 0 chrUextra 2750745 2751121 -26253535 - DMRT1B LINE R1 -1287 3896 3521 7 605 40 21 0 0 chrUextra 2751629 2751676 -26252980 + AT_rich Low_complexity Low_complexity 1 47 0 7 605 262 186 100 73 chrUextra 2751687 2751797 -26252859 + TABOR_LTR LTR Gypsy 3 115 -391 7 605 246 285 57 28 chrUextra 2751765 2751906 -26252750 + Gypsy11_LTR LTR Gypsy 101 245 -207 7 606 25 75 0 0 chrUextra 2752938 2752991 -26251665 + AT_rich Low_complexity Low_complexity 1 53 0 7 606 1143 238 13 10 chrUextra 2752998 2753303 -26251353 + XDMR Unknown Unknown 33 338 -23 7 606 4506 4 0 0 chrUextra 2753405 2753905 -26250751 - FW_DM LINE Jockey -4073 619 120 7 606 2204 112 6 18 chrUextra 2753912 2754249 -26250407 - Gypsy12_I LTR Gypsy -4991 555 223 7 606 267 223 19 46 chrUextra 2754224 2754332 -26250324 - Gypsy12_I LTR Gypsy -595 1685 1581 7 606 8121 40 18 12 chrUextra 2754497 2755489 -26249167 - DMCR1A LINE CR1 -2278 2192 1195 7 606 2428 0 31 0 chrUextra 2755589 2755876 -26248780 - ROO_I LTR Pao -7592 664 369 7 606 2466 8 0 0 chrUextra 2755876 2756142 -26248514 - DMLTR5 LTR Gypsy 0 266 1 7 606 3986 0 0 0 chrUextra 2756142 2756581 -26248075 - HMSBEAGLE_I LTR Gypsy 0 6529 6091 7 606 4058 31 0 6 chrUextra 2756681 2757164 -26247492 + HETA LINE telomeric 5600 6079 -2 7 606 4484 0 0 0 chrUextra 2757163 2757673 -26246983 + TAHRE LINE telomeric 7811 8320 -2143 7 606 7986 14 27 47 chrUextra 2757773 2758765 -26245891 - LSU-rRNA_Dme rRNA rRNA -1454 2446 1475 7 606 2529 99 5 39 chrUextra 2758866 2759254 -26245402 + CIRCE LINE Composite 3551 3925 -2431 7 606 2496 62 0 6 chrUextra 2759254 2759579 -26245077 + CIRCE LINE Composite 4658 4980 -1376 7 606 750 0 0 0 chrUextra 2759957 2760039 -26244617 + Invader3_LTR LTR Gypsy 217 298 0 7 606 8288 2 13 0 chrUextra 2760039 2760949 -26243707 + Invader3_I LTR Gypsy 1 922 -3966 7 606 4589 21 0 0 chrUextra 2761049 2761575 -26243081 - IDEFIX_I LTR Gypsy -3200 2428 1903 7 606 2269 45 21 3 chrUextra 2761551 2761842 -26242814 - IDEFIX_I LTR Gypsy -5332 296 1 7 606 22 35 0 0 chrUextra 2762205 2762234 -26242422 + AT_rich Low_complexity Low_complexity 1 29 0 7 606 47 33 0 0 chrUextra 2762526 2762587 -26242069 + AT_rich Low_complexity Low_complexity 1 61 0 7 606 48 32 0 0 chrUextra 2763064 2763126 -26241530 + AT_rich Low_complexity Low_complexity 1 62 0 7 606 4491 0 0 0 chrUextra 2763232 2763714 -26240942 - Copia_I LTR Copia -105 4488 4007 7 606 4607 6 0 6 chrUextra 2763695 2764223 -26240433 - Copia_I LTR Copia -804 3789 3265 7 606 8728 28 6 0 chrUextra 2764323 2765314 -26239342 + DMCR1A LINE CR1 331 1327 -3143 7 606 3573 40 0 0 chrUextra 2765414 2765840 -26238816 + MAX_I LTR Pao 2661 3086 -4828 7 606 3485 35 0 2 chrUextra 2765844 2766249 -26238407 + MAX_I LTR Pao 3376 3779 -4135 7 606 1303 32 0 7 chrUextra 2766250 2766405 -26238251 + MAX_I LTR Pao 4644 4797 -3117 7 606 3621 62 98 0 chrUextra 2766505 2766993 -26237663 + DMCR1A LINE CR1 2011 2546 -1924 7 606 521 51 0 132 chrUextra 2766992 2767083 -26237573 + DMCR1A LINE CR1 2759 2837 -1633 7 606 977 42 0 0 chrUextra 2767077 2767195 -26237461 + DMCR1A LINE CR1 2964 3081 -1389 7 606 1772 90 257 0 chrUextra 2767195 2767495 -26237161 + DMCR1A LINE CR1 3183 3559 -911 7 606 2652 107 47 25 chrUextra 2767596 2768587 -26236069 - DMSAT6 Satellite Satellite -35 1012 1 7 606 4345 57 4 4 chrUextra 2768687 2769229 -26235427 - R1_DM LINE R1 -4814 542 1 7 606 3534 24 10 5 chrUextra 2769262 2769678 -26234978 - R1_DM LINE R1 0 5356 4939 7 606 4703 38 10 46 chrUextra 2769783 2770390 -26234266 - CIRCE LINE Composite -5771 585 1 7 606 1036 68 0 0 chrUextra 2770390 2770522 -26234134 - CIRCE LINE Composite 0 6356 6225 7 606 2029 28 77 0 chrUextra 2770519 2770767 -26233889 - CIRCE LINE Composite -364 5992 5726 7 606 201 74 0 0 chrUextra 2771301 2771328 -26233328 + (TCTTG)n Simple_repeat Simple_repeat 1 27 0 7 606 1380 62 0 0 chrUextra 2771329 2771508 -26233148 + (CCTTG)n Simple_repeat Simple_repeat 1 179 0 7 606 2732 84 31 17 chrUextra 2771960 2772951 -26231705 + DMSAT6 Satellite Satellite 1 1005 -3 7 606 5204 9 0 0 chrUextra 2773051 2773623 -26231033 + QUASIMODO_LTR LTR Gypsy 87 658 0 7 606 392 103 14 29 chrUextra 2773652 2773713 -26230943 - DMTOM1_LTR LTR Gypsy -2 408 349 7 606 632 148 40 16 chrUextra 2773713 2773837 -26230819 - DMTOM1_LTR LTR Gypsy 0 410 284 7 606 282 191 59 0 chrUextra 2773854 2773922 -26230734 - DM176_LTR LTR Gypsy -141 366 295 7 606 1697 10 0 0 chrUextra 2774142 2774339 -26230317 - Invader2_I LTR Gypsy -2056 2536 2340 7 606 6539 25 19 0 chrUextra 2774337 2775126 -26229530 - Invader2_I LTR Gypsy -2648 1944 1141 7 606 6882 108 15 10 chrUextra 2775233 2776223 -26228433 + Gypsy12_I LTR Gypsy 2474 3468 -2078 7 606 3694 185 14 17 chrUextra 2778506 2779495 -26225161 + SAR_DM Satellite Satellite 1 985 -208 7 606 2798 17 6 0 chrUextra 2779606 2779955 -26224701 + G_DM LINE Jockey 3996 4346 0 7 606 4974 11 16 2 chrUextra 2779973 2780588 -26224068 + G_DM LINE Jockey 1 624 -3722 7 606 3514 188 38 22 chrUextra 2780689 2781656 -26223000 + SAR_DM Satellite Satellite 282 1264 -208 7 606 850 67 0 0 chrUextra 2781559 2781679 -26222977 - ARS406_DM Unknown Unknown -164 189 70 7 606 2815 37 3 0 chrUextra 2781780 2782131 -26222525 - DOC3_DM LINE Jockey -1324 3416 3065 7 606 5108 30 0 0 chrUextra 2782132 2782770 -26221886 + PROTOP_A DNA P 1 638 -467 7 606 2136 15 7 11 chrUextra 2782872 2783148 -26221508 - BLASTOPIA_LTR LTR Gypsy 0 275 1 7 606 1156 0 0 0 chrUextra 2783148 2783282 -26221374 - BLASTOPIA_I LTR Gypsy 0 4481 4348 7 606 5053 3 5 0 chrUextra 2783273 2783861 -26220795 - BLASTOPIA_I LTR Gypsy -978 3503 2913 7 606 328 48 0 0 chrUextra 2783965 2784007 -26220649 - PROTOP DNA P -1529 2951 2910 7 606 2704 57 114 0 chrUextra 2784031 2784435 -26220221 - PROTOP DNA P -3981 499 50 7 606 3096 210 19 18 chrUextra 2785051 2786040 -26218616 + SAR_DM Satellite Satellite 1 990 -208 7 606 8158 23 0 1 chrUextra 2786141 2787131 -26217525 - DM1731_I LTR Copia -2963 1013 25 7 606 2634 266 31 27 chrUextra 2787232 2788221 -26216435 - ROVER-I_DM LTR Gypsy -4523 2061 1069 7 606 7972 26 13 0 chrUextra 2788323 2789311 -26215345 - Gypsy4_I LTR Gypsy -4756 1532 532 7 606 4744 3 0 0 chrUextra 2789411 2789976 -26214680 + DOC LINE Jockey 4161 4725 0 7 606 180 0 0 0 chrUextra 2789991 2790011 -26214645 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 7 606 3143 23 0 3 chrUextra 2790011 2790401 -26214255 + DMRT1B LINE R1 163 551 -4632 7 606 3641 52 24 0 chrUextra 2790523 2791023 -26213633 - PROTOP DNA P -3968 512 1 7 606 297 95 47 16 chrUextra 2791193 2791257 -26213399 - TART LINE telomeric -6321 8156 8091 7 606 506 158 18 0 chrUextra 2791346 2791460 -26213196 - HETA LINE telomeric -171 5910 5795 7 606 865 127 23 57 chrUextra 2791954 2792130 -26212526 + ACCORD2_LTR LTR Gypsy 46 215 0 7 606 538 119 147 100 chrUextra 2792130 2792280 -26212376 + ACCORD2_I LTR Gypsy 1 157 -7055 7 606 448 0 0 0 chrUextra 2792277 2792328 -26212328 + ACCORD2_I LTR Gypsy 306 356 -6856 7 606 831 161 53 43 chrUextra 2792329 2792517 -26212139 + ACCORD2_LTR LTR Gypsy 26 215 0 7 606 7550 42 0 9 chrUextra 2792681 2793671 -26210985 + STALKER4_I LTR Gypsy 4401 5381 -1149 7 606 3144 0 0 5 chrUextra 2793771 2794160 -26210496 + DOC LINE Jockey 4339 4725 0 7 606 5029 13 0 0 chrUextra 2794164 2794761 -26209895 - IVK_DM LINE I -1403 3999 3403 7 606 22 35 0 0 chrUextra 2796137 2796166 -26208490 + AT_rich Low_complexity Low_complexity 1 29 0 7 606 208 200 31 0 chrUextra 2796359 2796424 -26208232 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 606 21 36 0 0 chrUextra 2796748 2796776 -26207880 + AT_rich Low_complexity Low_complexity 1 28 0 7 606 4456 34 2 2 chrUextra 2797041 2797598 -26207058 + R2_DM LINE R2 3029 3585 -22 7 606 191 32 65 0 chrUextra 2797598 2797629 -26207027 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 7 606 3276 10 2 10 chrUextra 2797629 2798030 -26206626 + LSU-rRNA_Dme rRNA rRNA 2584 2981 -919 7 606 291 232 0 0 chrUextra 2798821 2798890 -26205766 - BS2 LINE Jockey -507 4214 4146 7 606 1053 97 87 0 chrUextra 2799221 2799417 -26205239 - DMCR1A LINE CR1 -134 4336 4124 7 606 588 79 11 11 chrUextra 2799406 2799496 -26205160 - DMCR1A LINE CR1 -761 3709 3620 7 606 330 263 0 78 chrUextra 2799495 2799623 -26205033 - HMSBEAGLE_I LTR Gypsy -3032 3497 3380 7 606 3783 30 74 0 chrUextra 2800311 2801242 -26203414 - R1_DM LINE R1 -2080 3276 2277 7 606 436 0 0 0 chrUextra 2801242 2801292 -26203364 + CIRCE LINE Composite 4931 4980 -1376 7 606 8064 17 4 2 chrUextra 2801401 2802391 -26202265 + Gypsy4_I LTR Gypsy 4186 5177 -1111 7 606 4568 16 31 10 chrUextra 2802491 2803481 -26201175 + MAX_I LTR Pao 549 1637 -6277 7 606 3979 14 0 0 chrUextra 2803581 2804064 -26200592 - MDG3_I LTR Gypsy -3315 1671 1189 7 606 4379 6 0 0 chrUextra 2804063 2804571 -26200085 - MDG3_I LTR Gypsy -4022 964 457 7 606 694 0 12 0 chrUextra 2804671 2804756 -26199900 + BARI_DM DNA Tc1 1642 1727 -1 7 606 4972 4 6 0 chrUextra 2804756 2805661 -26198995 + BARI_DM DNA Tc1 4 966 -762 7 606 3580 200 30 13 chrUextra 2805762 2806750 -26197906 - SAR_DM Satellite Satellite -261 1211 207 7 606 3705 131 195 0 chrUextra 2806872 2807604 -26197052 - DMRT1B LINE R1 -340 4843 3968 7 606 1729 39 0 13 chrUextra 2807607 2807840 -26196816 + TRANSIB2 DNA Transib 10 239 -2605 7 606 5823 46 239 9 chrUextra 2807959 2808929 -26195727 + TART LINE telomeric 5300 7055 -7422 7 606 5359 109 28 6 chrUextra 2809029 2810015 -26194641 - STALKER4_I LTR Gypsy -442 6455 5326 7 606 1546 14 0 0 chrUextra 2810118 2810326 -26194330 + STALKER4_I LTR Gypsy 6312 6519 -11 7 606 2697 9 0 9 chrUextra 2810321 2810651 -26194005 + STALKER4_LTR LTR Gypsy 76 402 0 7 606 2235 167 5 7 chrUextra 2810678 2811107 -26193549 - ROVER-I_DM LTR Gypsy -1471 5113 4686 7 606 3058 53 38 0 chrUextra 2811208 2811626 -26193030 + DMCR1A LINE CR1 1751 2184 -2286 7 606 1359 92 9 9 chrUextra 2811626 2811846 -26192810 + DMCR1A LINE CR1 2317 2536 -1934 7 606 2096 58 0 0 chrUextra 2811851 2812126 -26192530 + DMCR1A LINE CR1 2643 2917 -1553 7 606 559 29 0 0 chrUextra 2812126 2812196 -26192460 + DMCR1A LINE CR1 3031 3100 -1370 7 606 21 0 0 0 chrUextra 2812438 2812459 -26192197 + AT_rich Low_complexity Low_complexity 1 21 0 7 606 1365 127 77 74 chrUextra 2812770 2813094 -26191562 - DNAREP1_DM LINE Penelope -262 332 8 7 606 299 165 25 42 chrUextra 2813165 2813285 -26191371 + PROTOP_B DNA P 311 428 -725 7 606 3475 58 70 0 chrUextra 2813573 2814247 -26190409 - PROTOP_A DNA P 0 1105 520 7 606 998 64 7 0 chrUextra 2814234 2814374 -26190282 - PROTOP_A DNA P -806 299 159 7 606 4353 0 0 10 chrUextra 2814477 2814981 -26189675 + HOBO DNA hAT 2518 3016 0 7 606 819 86 0 79 chrUextra 2815565 2815729 -26188927 + Gypsy12_I LTR Gypsy 666 816 -4730 7 606 1371 86 105 0 chrUextra 2815728 2815938 -26188718 + Gypsy12_I LTR Gypsy 1323 1554 -3992 7 606 373 77 0 0 chrUextra 2815945 2815997 -26188659 + Gypsy12_I LTR Gypsy 1503 1554 -3992 7 606 2174 110 0 12 chrUextra 2816004 2816327 -26188329 + Gypsy12_I LTR Gypsy 1503 1821 -3725 7 606 1508 71 116 0 chrUextra 2816324 2816549 -26188107 + Gypsy12_I LTR Gypsy 4465 4715 -831 7 606 5176 100 4 2 chrUextra 2816652 2817437 -26187219 + S_DM DNA Tc1 204 989 -747 7 606 1553 59 0 0 chrUextra 2817437 2817641 -26187015 + PROTOP_A DNA P 1 204 -901 7 606 1974 190 31 10 chrUextra 2817758 2818730 -26185926 - SAR_DM Satellite Satellite -396 992 1 7 606 2314 102 10 51 chrUextra 2818832 2819807 -26184849 + DMSAT6 Satellite Satellite 1 934 -3 7 606 2370 103 31 22 chrUextra 2819919 2820908 -26183748 - DMSAT6 Satellite Satellite -28 997 1 7 606 4844 10 0 0 chrUextra 2821008 2821596 -26183060 + STALKER4_I LTR Gypsy 5502 6089 -441 7 606 1550 21 67 0 chrUextra 2821613 2821851 -26182805 + STALKER4_I LTR Gypsy 6277 6530 0 7 606 1158 0 68 0 chrUextra 2821851 2821997 -26182659 + STALKER4_LTR LTR Gypsy 1 156 -246 7 606 3361 0 0 0 chrUextra 2822097 2822482 -26182174 - STALKER4_I LTR Gypsy -2351 4179 3795 7 606 5010 2 0 0 chrUextra 2822496 2823085 -26181571 - STALKER4_I LTR Gypsy -3859 2671 2083 7 606 832 217 5 5 chrUextra 2823185 2823393 -26181263 - Stalker2_I LTR Gypsy -6904 498 291 7 606 25 0 0 0 chrUextra 2823417 2823442 -26181214 + AT_rich Low_complexity Low_complexity 1 25 0 7 606 2571 40 86 0 chrUextra 2823583 2823932 -26180724 - STALKER4_LTR LTR Gypsy -23 379 1 7 606 295 240 10 20 chrUextra 2823932 2824034 -26180622 - Gypsy4_I LTR Gypsy -2017 4271 4171 7 606 323 199 27 5 chrUextra 2824052 2824170 -26180486 - Gypsy4_I LTR Gypsy -3523 2765 2650 7 606 284 280 56 0 chrUextra 2824391 2824498 -26180158 + NINJA_I LTR Pao 4448 4560 -1451 7 606 3283 202 34 19 chrUextra 2825361 2826317 -26178339 + SAR_DM Satellite Satellite 1 970 -255 7 606 5134 7 0 0 chrUextra 2826449 2827057 -26177599 - STALKER4_I LTR Gypsy -739 5791 5184 7 606 1104 35 7 0 chrUextra 2827056 2827188 -26177468 - DIVER_I LTR Pao -2219 3424 3292 7 606 1549 88 3 31 chrUextra 2827188 2827437 -26177219 - STALKER4_LTR LTR Gypsy -3 399 162 7 606 6728 15 63 2 chrUextra 2827537 2828525 -26176131 + SSU-rRNA_Dme rRNA rRNA 803 1850 -145 7 606 2249 126 18 21 chrUextra 2828625 2829613 -26175043 + DMSAT6 Satellite Satellite 1 984 -64 7 606 40 49 0 0 chrUextra 2829783 2829844 -26174812 + AT_rich Low_complexity Low_complexity 1 61 0 7 606 1557 85 4 46 chrUextra 2830822 2831082 -26173574 - BATUMI_I LTR Pao -7714 249 1 7 606 1925 35 3 90 chrUextra 2831082 2831392 -26173264 - BATUMI_I LTR Pao -679 7284 7002 7 606 279 125 235 0 chrUextra 2831395 2831787 -26172869 + (TTTAG)n Simple_repeat Simple_repeat 1 484 0 7 606 567 141 0 47 chrUextra 2832334 2832461 -26172195 + CT-rich Low_complexity Low_complexity 6 126 0 7 606 40 21 0 0 chrUextra 2833204 2833251 -26171405 + AT_rich Low_complexity Low_complexity 1 47 0 7 606 1972 18 4 0 chrUextra 2833740 2833965 -26170691 + Gypsy4_I LTR Gypsy 374 599 -5689 7 606 407 43 0 0 chrUextra 2834065 2834112 -26170544 - ROVER-I_DM LTR Gypsy -6537 47 1 7 606 3218 16 0 5 chrUextra 2834112 2834481 -26170175 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 606 528 124 101 118 chrUextra 2834481 2834709 -26169947 + MAX_I LTR Pao 285 508 -7406 7 606 2112 87 6 12 chrUextra 2834709 2835048 -26169608 + S_DM DNA Tc1 3 339 -1397 7 606 2930 255 11 30 chrUextra 2835153 2836058 -26168598 + DM412 LTR Gypsy 5688 6575 -322 7 606 3199 25 3 0 chrUextra 2836241 2836601 -26168055 + Gypsy_LTR LTR Gypsy 122 482 0 7 606 5001 8 236 0 chrUextra 2836599 2837229 -26167427 + Gypsy_I LTR Gypsy 1 779 -5728 7 606 4315 8 0 0 chrUextra 2837329 2837803 -26166853 - DOC LINE Jockey -428 4297 3824 7 606 4644 4 0 0 chrUextra 2837809 2838317 -26166339 - DOC LINE Jockey -1078 3647 3140 7 606 442 179 403 0 chrUextra 2838417 2838618 -26166038 + PROTOP DNA P 3967 4248 -232 7 606 594 289 128 34 chrUextra 2838704 2839141 -26165515 - MICROPIA_I LTR Gypsy -626 3850 3163 7 606 646 247 50 42 chrUextra 2839143 2839405 -26165251 - MICROPIA_I LTR Gypsy -1098 3378 3115 7 606 4228 187 16 24 chrUextra 2839505 2840487 -26164169 + SAR_DM Satellite Satellite 208 1181 -291 7 606 829 133 0 0 chrUextra 2840592 2840727 -26163929 - ARS406_DM Unknown Unknown -218 135 1 7 606 4098 192 8 19 chrUextra 2840631 2841569 -26163087 + SAR_DM Satellite Satellite 192 1118 -354 7 606 361 202 0 21 chrUextra 2841483 2841579 -26163077 - XDMR_DM Unknown Unknown 0 360 267 7 606 3639 190 35 50 chrUextra 2841679 2842665 -26161991 + SAR_DM Satellite Satellite 250 1221 -251 7 606 3847 167 33 18 chrUextra 2842768 2843620 -26161036 - SAR_DM Satellite Satellite -417 1055 191 7 606 423 254 0 0 chrUextra 2843631 2843753 -26160903 - SAR_DM Satellite Satellite -749 723 602 7 606 7912 20 45 15 chrUextra 2843853 2844840 -26159816 - ROO_I LTR Pao -4706 3550 2535 7 606 2411 189 65 30 chrUextra 2844957 2845927 -26158729 + SAR_DM Satellite Satellite 1 1004 -839 7 606 7831 39 54 10 chrUextra 2846027 2847014 -26157642 - DOC3_DM LINE Jockey -1839 2901 1872 7 606 3890 186 44 34 chrUextra 2847126 2848073 -26156583 - HETA LINE telomeric -655 5426 4470 7 606 1318 35 0 45 chrUextra 2848201 2848378 -26156278 - NINJA_LTR LTR Pao -148 169 1 7 606 1021 99 56 20 chrUextra 2848390 2848585 -26156071 + ACCORD2_I LTR Gypsy 1525 1726 -5486 7 606 956 187 5 31 chrUextra 2848585 2848778 -26155878 + Gypsy12_LTR LTR Gypsy 1 188 -2148 7 606 613 229 102 60 chrUextra 2848789 2849188 -26155468 + Gypsy12_LTR LTR Gypsy 1427 1878 -458 7 606 4751 127 52 52 chrUextra 2849288 2850275 -26154381 - PROTOP_B DNA P -83 1070 84 7 606 26 0 0 0 chrUextra 2850378 2850404 -26154252 + AT_rich Low_complexity Low_complexity 1 26 0 7 606 2492 184 113 106 chrUextra 2850404 2851339 -26153317 + Gypsy12A_LTR LTR Gypsy 1007 1969 -367 7 606 2567 100 19 20 chrUextra 2851464 2852449 -26152207 - DMSAT6 Satellite Satellite -61 984 1 7 606 5897 1 0 3 chrUextra 2852551 2853202 -26151454 + DOC LINE Jockey 4076 4724 -1 7 606 376 49 65 16 chrUextra 2853229 2853291 -26151365 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 606 977 178 102 15 chrUextra 2853290 2853495 -26151161 - DMLTR5 LTR Gypsy 0 266 44 7 606 2239 306 50 19 chrUextra 2854724 2855705 -26148951 + Invader6_I LTR Gypsy 1588 2598 -1501 7 606 3586 3 0 0 chrUextra 2855810 2856202 -26148454 - R2_DM LINE R2 -2528 1079 688 7 606 621 0 0 0 chrUextra 2856200 2856268 -26148388 - R1_DM LINE R1 -5288 68 1 7 606 4872 2 0 2 chrUextra 2856268 2856797 -26147859 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2105 7 606 2460 113 30 21 chrUextra 2856897 2857881 -26146775 + DMSAT6 Satellite Satellite 1 992 -116 7 606 567 50 75 0 chrUextra 2857984 2858064 -26146592 - TART LINE telomeric -10709 3768 3683 7 606 5805 74 61 33 chrUextra 2858059 2858971 -26145685 - TART LINE telomeric -11115 3362 2425 7 606 396 192 279 39 chrUextra 2859379 2859548 -26145108 - DNAREP1_DM LINE Penelope -325 269 59 7 606 2550 43 3 5 chrUextra 2859548 2859873 -26144783 + Gypsy6A_LTR LTR Gypsy 1 408 -12 7 606 1670 11 0 0 chrUextra 2859873 2860058 -26144598 + Gypsy12_LTR LTR Gypsy 1 185 -2151 7 606 2554 125 16 16 chrUextra 2860158 2861142 -26143514 - DMSAT6 Satellite Satellite -39 983 1 7 606 1389 33 16 37 chrUextra 2861245 2861432 -26143224 + G5A_DM LINE Jockey 2656 2838 -3 7 606 628 267 131 20 chrUextra 2861458 2861710 -26142946 - Gypsy7_I LTR Gypsy -3317 1667 1388 7 606 3222 51 0 5 chrUextra 2861834 2862232 -26142424 - PROTOP_A DNA P 0 1105 710 7 606 1336 184 20 4 chrUextra 2862332 2862578 -26142078 - MICROPIA_I LTR Gypsy -3954 522 273 7 606 4605 87 45 28 chrUextra 2862645 2863319 -26141337 - DMCR1A LINE CR1 -228 4242 3558 7 606 3781 12 2 2 chrUextra 2863967 2864397 -26140259 - Gypsy5_LTR LTR Gypsy 0 430 1 7 606 2640 84 56 12 chrUextra 2864506 2865491 -26139165 + DMSAT6 Satellite Satellite 1 1028 -37 7 606 2202 30 0 0 chrUextra 2865594 2865856 -26138800 - FW_DM LINE Jockey -1311 3381 3120 7 606 1443 284 41 23 chrUextra 2866677 2867240 -26137416 + Copia2_I LTR Copia 730 1302 -2860 7 606 574 31 0 0 chrUextra 2867308 2867373 -26137283 + PROTOP_B DNA P 11 75 -1078 7 606 2206 73 14 0 chrUextra 2867375 2867663 -26136993 + BS2 LINE Jockey 4412 4703 -18 7 606 8748 21 1 3 chrUextra 2867763 2868749 -26135907 - BATUMI_I LTR Pao -2054 5909 4926 7 606 3081 35 0 5 chrUextra 2868849 2869221 -26135435 - IDEFIX_LTR LTR Gypsy -93 501 132 7 606 4686 55 16 2 chrUextra 2869220 2869835 -26134821 - IDEFIX_I LTR Gypsy -558 5070 4447 7 606 2416 96 26 54 chrUextra 2871021 2872003 -26132653 - DMSAT6 Satellite Satellite -109 955 1 7 606 3482 90 49 53 chrUextra 2872111 2872870 -26131786 + Gypsy12_LTR LTR Gypsy 1501 2336 0 7 606 3879 198 20 13 chrUextra 2873193 2874179 -26130477 + SAR_DM Satellite Satellite 1 992 -203 7 606 2321 122 28 2 chrUextra 2874285 2874711 -26129945 + MDG1_I LTR Gypsy 785 1221 -5375 7 606 4451 53 7 0 chrUextra 2874701 2875265 -26129391 + MDG1_I LTR Gypsy 1134 1701 -4895 7 606 2938 0 0 15 chrUextra 2875365 2875689 -26128967 + HOBO DNA hAT 2698 3016 0 7 606 8243 39 0 0 chrUextra 2876451 2877434 -26127222 - STALKER4_I LTR Gypsy -2589 3941 2959 7 606 422 135 40 0 chrUextra 2877542 2877616 -26127040 + DMCR1A LINE CR1 394 470 -4000 7 606 5358 21 6 40 chrUextra 2877627 2878324 -26126332 + DOC5_DM LINE Jockey 3979 4651 -31 7 606 242 0 61 0 chrUextra 2878326 2878359 -26126297 + (TATAA)n Simple_repeat Simple_repeat 2 36 0 7 606 298 125 62 0 chrUextra 2879086 2879166 -26125490 + GA-rich Low_complexity Low_complexity 5 89 0 7 606 8126 41 1 1 chrUextra 2879709 2880695 -26123961 + R1_DM LINE R1 743 1728 -3628 7 606 4065 190 12 17 chrUextra 2880803 2881781 -26122875 - SAR_DM Satellite Satellite -417 973 1 7 606 2507 55 9 17 chrUextra 2881881 2882454 -26122202 - Invader2_I LTR Gypsy -3846 746 2 7 606 1064 52 37 0 chrUextra 2882475 2882611 -26122045 - Invader2_LTR LTR Gypsy -125 141 1 7 606 309 274 29 29 chrUextra 2882628 2882767 -26121889 + Gypsy5_I LTR Gypsy 902 1040 -5469 7 75 8876 5 9 0 chrUextra 2882967 2883953 -26120703 + STALKER4_I LTR Gypsy 1653 2647 -3883 7 607 2607 96 12 40 chrUextra 2884064 2884543 -26120113 - DMSAT6 Satellite Satellite 0 470 5 7 607 2524 91 17 30 chrUextra 2884572 2885038 -26119618 - DMSAT6 Satellite Satellite 0 470 11 7 607 3328 180 6 7 chrUextra 2885138 2885821 -26118835 - SAR_DM Satellite Satellite -594 878 197 7 607 753 124 0 0 chrUextra 2885730 2885851 -26118805 + ARS406_DM Unknown Unknown 1 121 -232 7 607 1445 167 11 7 chrUextra 2885839 2886123 -26118533 - SAR_DM Satellite Satellite -545 927 643 7 607 3068 0 0 0 chrUextra 2886223 2886552 -26118104 + LSU-rRNA_Dme rRNA rRNA 2227 2555 -1345 7 607 1630 0 0 0 chrUextra 2886575 2886750 -26117906 + R2_DM LINE R2 3427 3601 -6 7 607 4276 4 0 0 chrUextra 2886746 2887208 -26117448 + LSU-rRNA_Dme rRNA rRNA 2578 3039 -861 7 607 1775 34 0 0 chrUextra 2887308 2887512 -26117144 - PROTOP_A DNA P -901 204 1 7 607 332 204 124 110 chrUextra 2887704 2888293 -26116363 - ROVER-I_DM LTR Gypsy -5804 780 184 7 607 8197 9 7 1 chrUextra 2888393 2889378 -26115278 + DMRT1B LINE R1 687 1677 -3506 7 607 998 95 0 0 chrUextra 2889480 2889638 -26115018 + ARS406_DM Unknown Unknown 1 158 -195 7 607 1725 182 17 7 chrUextra 2889645 2890049 -26114607 - SAR_DM Satellite Satellite -569 903 496 7 607 644 63 53 0 chrUextra 2890054 2890149 -26114507 + ARS406_DM Unknown Unknown 90 189 -164 7 607 1705 168 23 15 chrUextra 2890064 2890458 -26114198 - SAR_DM Satellite Satellite -569 903 507 7 607 943 37 7 29 chrUextra 2890563 2890703 -26113953 - NINJA_I LTR Pao -5874 137 1 7 607 2202 49 0 10 chrUextra 2890703 2890994 -26113662 - NINJA_LTR LTR Pao 0 317 30 7 607 4124 37 33 2 chrUextra 2891005 2891548 -26113108 + PROTOP DNA P 1 560 -3920 7 607 3374 203 25 12 chrUextra 2891648 2892627 -26112029 + SAR_DM Satellite Satellite 1 991 -203 7 607 8000 8 42 0 chrUextra 2892733 2893715 -26110941 - STALKER4_I LTR Gypsy -2282 4248 3226 7 607 2950 210 27 14 chrUextra 2893818 2894800 -26109856 - SAR_DM Satellite Satellite -844 994 1 7 607 885 0 0 9 chrUextra 2894903 2895010 -26109646 + NTS_DM Other Other 13 118 -122 7 607 293 47 0 23 chrUextra 2895010 2895054 -26109602 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 607 525 13 0 62 chrUextra 2895114 2895194 -26109462 + NTS_DM Other Other 59 133 -107 7 607 655 40 29 20 chrUextra 2895194 2895296 -26109360 + NTS_DM Other Other 38 140 -100 7 607 248 172 17 17 chrUextra 2895532 2895591 -26109065 + DM176_LTR LTR Gypsy 308 366 -141 7 607 552 148 40 16 chrUextra 2895608 2895732 -26108924 + DMTOM1_LTR LTR Gypsy 284 410 0 7 607 388 100 14 28 chrUextra 2895732 2895795 -26108861 + DMTOM1_LTR LTR Gypsy 349 410 0 7 607 243 181 0 108 chrUextra 2895795 2895888 -26108768 + ROVER-I_DM LTR Gypsy 1 83 -6501 7 607 2350 78 14 49 chrUextra 2895988 2896957 -26107699 + DMSAT6 Satellite Satellite 1 934 0 7 607 2395 116 13 22 chrUextra 2897094 2898033 -26106623 + DMSAT6 Satellite Satellite 1 929 -6 7 607 314 328 16 11 chrUextra 2898346 2898537 -26106119 - BLASTOPIA_I LTR Gypsy -749 3732 3541 7 607 335 296 19 19 chrUextra 2898873 2899035 -26105621 - MDG3_I LTR Gypsy -1562 3424 3263 7 607 3561 5 0 2 chrUextra 2899243 2899659 -26104997 - DOC LINE Jockey -4279 446 32 7 607 550 199 25 56 chrUextra 2899688 2899848 -26104808 - DMCR1A LINE CR1 -2190 2280 2126 7 607 528 188 0 0 chrUextra 2900765 2900893 -26103763 + (AATAG)n Simple_repeat Simple_repeat 2 129 0 7 607 1640 112 32 7 chrUextra 2901413 2901692 -26102964 + TART LINE telomeric 9197 9482 -4995 7 607 225 329 84 42 chrUextra 2901995 2902328 -26102328 - BLASTOPIA_I LTR Gypsy -1 4480 4134 7 607 3958 0 0 0 chrUextra 2902498 2902952 -26101704 - DOC6_DM LINE Jockey -2286 1936 1483 7 607 2116 54 7 0 chrUextra 2902951 2903231 -26101425 - Baggins1 LINE LOA -3886 1567 1286 7 607 2010 42 8 0 chrUextra 2903218 2903483 -26101173 - Baggins1 LINE LOA -4512 941 675 7 607 906 72 36 0 chrUextra 2903583 2903721 -26100935 + QUASIMODO_I LTR Gypsy 5033 5175 -885 7 607 1653 34 0 0 chrUextra 2903732 2903967 -26100689 + QUASIMODO_I LTR Gypsy 5493 5727 -333 7 607 2484 93 35 32 chrUextra 2904067 2904501 -26100155 + QUASIMODO_LTR LTR Gypsy 91 658 0 7 607 428 36 0 0 chrUextra 2904668 2904723 -26099933 + ARS406_DM Unknown Unknown 135 189 -164 7 607 3318 186 60 16 chrUextra 2904674 2905648 -26099008 - SAR_DM Satellite Satellite -256 1016 1 7 607 5021 0 15 0 chrUextra 2905753 2906346 -26098310 + BARI_DM DNA Tc1 1126 1727 -1 7 607 3376 0 0 0 chrUextra 2906346 2906738 -26097918 + BARI_DM DNA Tc1 4 395 -1333 7 607 4337 0 0 0 chrUextra 2906838 2907338 -26097318 - FW_DM LINE Jockey -4192 500 1 7 607 412 88 44 0 chrUextra 2907432 2907500 -26097156 - DNAREP1_DM LINE Penelope -2 592 522 7 607 406 149 0 0 chrUextra 2907497 2907564 -26097092 - Gypsy_LTR LTR Gypsy -415 67 1 7 607 1727 121 0 0 chrUextra 2907564 2907820 -26096836 - Gypsy_I LTR Gypsy 0 6507 6252 7 607 1888 16 0 65 chrUextra 2907923 2908183 -26096473 + CIRCE LINE Composite 5185 5427 -929 7 607 5267 20 14 0 chrUextra 2908270 2908908 -26095748 + CIRCE LINE Composite 5428 6074 -282 7 607 1111 14 7 7 chrUextra 2909008 2909157 -26095499 + IDEFIX_LTR LTR Gypsy 446 594 0 7 607 25 0 0 0 chrUextra 2909347 2909372 -26095284 + AT_rich Low_complexity Low_complexity 1 25 0 7 607 2190 4 0 0 chrUextra 2909736 2909993 -26094663 + IDEFIX_I LTR Gypsy 1 257 -5371 7 607 222 37 0 0 chrUextra 2910856 2910883 -26093773 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 607 2415 98 33 21 chrUextra 2911178 2912160 -26092496 - DMSAT6 Satellite Satellite -38 993 1 7 607 942 337 65 31 chrUextra 2912360 2913242 -26091414 - Invader6_I LTR Gypsy -1504 2595 1684 7 607 228 114 0 0 chrUextra 2913347 2913382 -26091274 - Invader1_I LTR Gypsy 0 3186 3152 7 607 645 269 5 5 chrUextra 2914122 2914331 -26090325 - Invader1_I LTR Gypsy -622 2564 2356 7 607 205 51 51 0 chrUextra 2914891 2914930 -26089726 + (TA)n Simple_repeat Simple_repeat 1 41 0 7 607 426 70 0 0 chrUextra 2915516 2915573 -26089083 + DM297_I LTR Gypsy 732 788 -5379 7 607 491 61 60 12 chrUextra 2915561 2915644 -26089012 - DM297_I LTR Gypsy -6080 87 1 7 607 526 99 369 0 chrUextra 2915644 2915810 -26088846 - DM297_LTR LTR Gypsy 0 414 187 7 607 313 233 23 11 chrUextra 2915835 2915922 -26088734 - R1-2_DM LINE R1 -12 5344 5257 7 607 299 167 0 0 chrUextra 2916036 2916098 -26088558 - R1-2_DM LINE R1 0 3216 3167 7 607 2454 97 113 10 chrUextra 2916094 2916499 -26088157 - R1-2_DM LINE R1 -551 2665 2219 7 607 22 0 0 0 chrUextra 2916825 2916847 -26087809 + AT_rich Low_complexity Low_complexity 1 22 0 7 607 30 0 0 0 chrUextra 2916889 2916919 -26087737 + AT_rich Low_complexity Low_complexity 1 30 0 7 607 1913 246 27 4 chrUextra 2917011 2917574 -26087082 - DM297_I LTR Gypsy -1864 4303 3728 7 607 2470 102 6 31 chrUextra 2917685 2918667 -26085989 - DMSAT6 Satellite Satellite -61 957 1 7 607 4602 115 99 41 chrUextra 2918769 2919751 -26084905 - TART LINE telomeric -4242 10235 9197 7 607 2204 22 0 4 chrUextra 2919851 2920120 -26084536 - PROTOP_A DNA P -837 268 1 7 607 4462 95 1 28 chrUextra 2920120 2920832 -26083824 - HETA LINE telomeric -119 5962 5270 7 607 7540 42 35 1 chrUextra 2920935 2921919 -26082737 - R1_DM LINE R1 -3355 2001 985 7 607 362 198 18 26 chrUextra 2922020 2922134 -26082522 + XDMR_DM Unknown Unknown 248 360 0 7 607 3715 213 24 23 chrUextra 2922056 2924087 -26080569 - SAR_DM Satellite Satellite -361 2032 1 7 607 2434 106 24 5 chrUextra 2924188 2925170 -26079486 - DMSAT6 Satellite Satellite -61 1000 1 7 607 2649 48 152 4 chrUextra 2925271 2925790 -26078866 - IVK_DM LINE I -890 4512 3917 7 607 2286 148 37 11 chrUextra 2925794 2926253 -26078403 + Gypsy12_LTR LTR Gypsy 1706 2176 -160 7 607 7420 9 0 0 chrUextra 2926355 2927223 -26077433 - Copia2_I LTR Copia -2062 2100 1233 7 607 1025 0 8 0 chrUextra 2927218 2927339 -26077317 - Copia2_I LTR Copia -3039 1123 1002 7 607 4922 21 0 40 chrUextra 2927439 2928122 -26076534 + DOC5_DM LINE Jockey 3996 4651 -31 7 607 260 0 57 0 chrUextra 2928122 2928157 -26076499 + (TATAA)n Simple_repeat Simple_repeat 5 41 0 7 607 2753 9 27 0 chrUextra 2928523 2928851 -26075805 + DM1731_I LTR Copia 2879 3215 -761 7 607 4320 51 142 0 chrUextra 2928865 2929507 -26075149 - TRANSIB2 DNA Transib -1377 1467 735 7 607 2178 180 11 9 chrUextra 2929609 2930589 -26074067 + SAR_DM Satellite Satellite 1 982 -473 7 607 255 111 0 0 chrUextra 2930691 2930736 -26073920 - ARS406_DM Unknown Unknown -308 45 1 7 607 3646 202 13 16 chrUextra 2930696 2931669 -26072987 + SAR_DM Satellite Satellite 246 1215 -257 7 607 391 74 0 0 chrUextra 2931621 2931675 -26072981 - ARS406_DM Unknown Unknown -164 189 136 7 607 2491 36 0 0 chrUextra 2931775 2932083 -26072573 + DMRT1B LINE R1 4876 5183 0 7 607 546 28 106 0 chrUextra 2932101 2932243 -26072413 + (CAGAC)n Simple_repeat Simple_repeat 1 157 0 7 607 3140 52 26 0 chrUextra 2932255 2932759 -26071897 + DMRT1A LINE R1 1 662 -4521 7 607 3516 192 17 19 chrUextra 2932859 2933793 -26070863 + SAR_DM Satellite Satellite 333 1264 -208 7 607 990 75 7 0 chrUextra 2933696 2933842 -26070814 - ARS406_DM Unknown Unknown -164 189 43 7 607 4137 172 143 49 chrUextra 2933944 2935891 -26068765 + Baggins1 LINE LOA 3061 5191 -262 7 607 3348 0 0 0 chrUextra 2936110 2936503 -26068153 + FW_DM LINE Jockey 4300 4692 0 7 607 1836 5 32 0 chrUextra 2936506 2936727 -26067929 + Gypsy4_I LTR Gypsy 3669 3896 -2392 7 607 2969 14 3 0 chrUextra 2936740 2937093 -26067563 + Gypsy4_I LTR Gypsy 3950 4303 -1985 7 607 339 319 31 31 chrUextra 2937858 2938087 -26066569 - Gypsy3_I LTR Gypsy -4643 1492 1179 7 607 3498 5 0 9 chrUextra 2938276 2938702 -26065954 + FW_DM LINE Jockey 4271 4692 0 7 607 4300 15 0 18 chrUextra 2938700 2939259 -26065397 - PROTOP_A DNA P -351 754 206 7 607 1913 13 4 0 chrUextra 2939359 2939588 -26065068 - MDG1_LTR LTR Gypsy -126 316 87 7 607 423 100 0 0 chrUextra 2939588 2939658 -26064998 + (TTA)n Simple_repeat Simple_repeat 3 72 0 7 607 1772 221 101 30 chrUextra 2939675 2940337 -26064319 - Gypsy12_LTR LTR Gypsy -447 1889 1181 7 607 5802 6 31 0 chrUextra 2940442 2941425 -26063231 + DOC2_DM LINE Jockey 2774 3787 -1006 7 607 1703 54 4 28 chrUextra 2941534 2941781 -26062875 - BATUMI_LTR LTR Pao 0 272 32 7 607 1700 132 81 9 chrUextra 2941799 2942144 -26062512 + MDG1_LTR LTR Gypsy 43 412 -30 7 607 1884 159 14 0 chrUextra 2942149 2942508 -26062148 + IDEFIX_I LTR Gypsy 4800 5163 -465 7 607 5097 11 70 5 chrUextra 2942608 2943591 -26061065 - ACCORD2_I LTR Gypsy -1712 5500 4454 7 607 597 335 42 35 chrUextra 2943728 2944564 -26060092 + HMSBEAGLE_I LTR Gypsy 4544 5385 -1144 7 607 821 320 60 35 chrUextra 2944775 2945736 -26058920 + MDG1_I LTR Gypsy 2142 3126 -3470 7 607 2759 180 11 14 chrUextra 2945857 2946840 -26057816 + SAR_DM Satellite Satellite 1 980 -836 7 607 7765 31 7 8 chrUextra 2946940 2947923 -26056733 - MAX_I LTR Pao -1762 6152 5171 7 607 1359 45 0 0 chrUextra 2948341 2948546 -26056110 + (CAATA)n Simple_repeat Simple_repeat 1 205 0 7 607 4278 143 67 31 chrUextra 2949179 2950086 -26054570 - TART LINE telomeric -7824 6653 5714 7 607 775 171 0 38 chrUextra 2950190 2950348 -26054308 - Gypsy12_LTR LTR Gypsy -2184 152 1 7 607 311 328 136 9 chrUextra 2950365 2950601 -26054055 + Ulysses_I LTR Gypsy 5202 5467 -914 7 607 426 308 41 0 chrUextra 2950680 2950875 -26053781 + Ulysses_I LTR Gypsy 5641 5843 -538 7 607 348 236 103 49 chrUextra 2950905 2951128 -26053528 + Ulysses_I LTR Gypsy 5894 6128 -253 7 607 4373 40 61 0 chrUextra 2951272 2952254 -26052402 - MAX_I LTR Pao -960 6954 5913 7 607 624 314 22 26 chrUextra 2952854 2953336 -26051320 + Gypsy4_I LTR Gypsy 2431 2669 -3619 7 607 3226 85 0 7 chrUextra 2953436 2953886 -26050770 - HMSBEAGLE_I LTR Gypsy -2300 4229 3783 7 607 302 243 332 5 chrUextra 2953886 2954073 -26050583 - BS LINE Jockey -2802 2324 2077 7 607 2001 151 0 0 chrUextra 2954084 2954416 -26050240 - HMSBEAGLE_I LTR Gypsy -2721 3808 3477 7 607 617 45 22 11 chrUextra 2954518 2954609 -26050047 + BATUMI_LTR LTR Pao 181 272 0 7 607 5316 0 0 0 chrUextra 2955600 2956209 -26048447 + BEL_I LTR Pao 1093 1701 -3703 7 607 3208 5 0 0 chrUextra 2956209 2956582 -26048074 - TIRANT_LTR LTR Gypsy 0 417 45 7 607 3183 204 13 14 chrUextra 2956689 2957664 -26046992 + SAR_DM Satellite Satellite 1 974 -227 7 607 3771 39 100 0 chrUextra 2957764 2958746 -26045910 + IDEFIX_I LTR Gypsy 2013 3092 -2536 7 607 6137 15 99 1 chrUextra 2958846 2959828 -26044828 + ROO_I LTR Pao 733 1810 -6446 7 607 4470 28 5 2 chrUextra 2959928 2960498 -26044158 - FW_DM LINE Jockey -2929 1763 1228 7 607 2405 11 3 0 chrUextra 2960627 2960910 -26043746 - Gypsy2_LTR LTR Gypsy 0 353 70 7 607 2709 6 0 0 chrUextra 2961010 2961323 -26043333 + R1_DM LINE R1 5044 5356 0 7 607 3178 68 0 0 chrUextra 2961323 2961750 -26042906 + R1_DM LINE R1 1367 1793 -3563 7 607 1374 170 0 0 chrUextra 2961751 2961992 -26042664 + R1_DM LINE R1 310 550 -4806 7 607 4971 7 0 0 chrUextra 2962092 2962691 -26041965 + ROVER-I_DM LTR Gypsy 2110 2708 -3876 7 607 3216 5 0 0 chrUextra 2962694 2963074 -26041582 + ROVER-I_DM LTR Gypsy 3036 3415 -3169 7 607 7882 23 3 1 chrUextra 2963174 2964156 -26040500 + ROO_I LTR Pao 3799 4782 -3474 7 607 1431 38 0 0 chrUextra 2964660 2964977 -26039679 + (TCTTG)n Simple_repeat Simple_repeat 1 317 0 7 607 1452 6 6 6 chrUextra 2965338 2965515 -26039141 + Copia_I LTR Copia 4417 4593 0 7 607 2186 18 0 0 chrUextra 2965515 2965791 -26038865 + Copia_LTR LTR Copia 1 276 0 7 607 232 0 0 0 chrUextra 2965791 2965825 -26038831 + Copia_LTR LTR Copia 243 276 0 7 607 3834 18 2 8 chrUextra 2965825 2966320 -26038336 + PROTOP_A DNA P 551 1042 -63 7 607 7629 31 34 1 chrUextra 2966420 2967399 -26037257 - R1_DM LINE R1 -1711 3645 2635 7 607 445 18 0 0 chrUextra 2967502 2967559 -26037097 + DOC5_DM LINE Jockey 4595 4651 -31 7 607 260 0 57 0 chrUextra 2967559 2967594 -26037062 + (TATAA)n Simple_repeat Simple_repeat 5 41 0 7 607 293 274 39 24 chrUextra 2968585 2968712 -26035944 - XDMR Unknown Unknown -232 129 1 7 607 3610 202 14 20 chrUextra 2968602 2969565 -26035091 + SAR_DM Satellite Satellite 246 1202 -270 7 607 23 0 0 0 chrUextra 2969705 2969728 -26034928 + AT_rich Low_complexity Low_complexity 1 23 0 7 607 2434 192 12 10 chrUextra 2970747 2971727 -26032929 + SAR_DM Satellite Satellite 1 982 -645 7 607 4600 10 33 3 chrUextra 2971832 2972409 -26032247 - IDEFIX_LTR LTR Gypsy 0 594 1 7 607 450 49 0 0 chrUextra 2972409 2972470 -26032186 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 607 733 104 8 0 chrUextra 2972908 2973033 -26031623 - ARS406_DM Unknown Unknown -227 126 1 7 607 3490 196 11 21 chrUextra 2972937 2973875 -26030781 + SAR_DM Satellite Satellite 192 1119 -353 7 607 332 172 20 20 chrUextra 2973788 2973889 -26030767 - XDMR_DM Unknown Unknown 0 360 260 7 607 2413 108 19 28 chrUextra 2973989 2974968 -26029688 - DMSAT6 Satellite Satellite -72 970 1 7 607 3744 183 19 22 chrUextra 2975073 2976049 -26028607 + SAR_DM Satellite Satellite 65 1037 -435 7 607 661 143 57 25 chrUextra 2976209 2976367 -26028289 - DNAREP1_DM LINE Penelope -415 179 17 7 607 3590 195 12 16 chrUextra 2977232 2978213 -26026443 - SAR_DM Satellite Satellite -435 976 1 7 607 5206 10 2 0 chrUextra 2978313 2978931 -26025725 - FW_DM LINE Jockey -4073 619 1 7 607 2779 29 0 0 chrUextra 2978945 2979294 -26025362 + STALKER4_I LTR Gypsy 2748 3096 -3434 7 607 3123 26 0 0 chrUextra 2979418 2979797 -26024859 - STALKER4_LTR LTR Gypsy -23 379 1 7 607 403 304 16 16 chrUextra 2979804 2979991 -26024665 + MICROPIA_I LTR Gypsy 301 487 -3989 7 607 431 356 30 0 chrUextra 2980066 2980364 -26024292 + MICROPIA_I LTR Gypsy 1211 1517 -2959 7 607 4663 4 0 0 chrUextra 2980475 2981012 -26023644 + BS2 LINE Jockey 4185 4721 0 7 607 261 0 0 0 chrUextra 2981021 2981050 -26023606 + (A)n Simple_repeat Simple_repeat 1 29 0 7 607 432 87 43 0 chrUextra 2981051 2981120 -26023536 + IDEFIX_I LTR Gypsy 1430 1501 -4127 7 607 1573 129 116 3 chrUextra 2981154 2981456 -26023200 + IDEFIX_I LTR Gypsy 2442 2777 -2851 7 607 783 32 0 0 chrUextra 2981556 2981651 -26023005 - LSU-rRNA_Dme rRNA rRNA -1228 2672 2578 7 607 7694 3 14 0 chrUextra 2981647 2982537 -26022119 - R2_DM LINE R2 -6 3601 2700 7 607 4389 10 0 0 chrUextra 2983718 2984238 -26020418 + FW_DM LINE Jockey 4169 4688 -4 7 607 1896 128 50 25 chrUextra 2984243 2984699 -26019957 - STALKER4_I LTR Gypsy -5618 912 396 7 607 1290 6 0 18 chrUextra 2984877 2985042 -26019614 - NTS_DM Other Other -78 162 1 7 607 1847 4 17 13 chrUextra 2985042 2985281 -26019375 - NTS_DM Other Other 0 240 1 7 607 1836 8 17 13 chrUextra 2985281 2985520 -26019136 - NTS_DM Other Other 0 240 1 7 607 1659 34 17 21 chrUextra 2985520 2985761 -26018895 - NTS_DM Other Other 0 240 1 7 607 339 292 0 0 chrUextra 2986303 2986409 -26018247 + Copia2_I LTR Copia 567 672 -3490 7 607 1131 38 0 37 chrUextra 2986961 2987123 -26017533 - BATUMI_LTR LTR Pao -85 187 32 7 607 3239 206 60 4 chrUextra 2987139 2987942 -26016714 + ROVER-I_DM LTR Gypsy 3241 4088 -2496 7 607 3620 88 2 24 chrUextra 2988042 2988590 -26016066 + Gypsy12_I LTR Gypsy 1019 1554 -3992 7 607 2102 111 12 12 chrUextra 2988597 2988916 -26015740 + Gypsy12_I LTR Gypsy 1503 1821 -3725 7 607 592 91 236 0 chrUextra 2988913 2989023 -26015633 + Gypsy12_I LTR Gypsy 4465 4600 -946 7 607 2187 103 8 53 chrUextra 2989136 2989628 -26015028 + DMSAT6 Satellite Satellite 1 470 0 7 607 2323 92 18 22 chrUextra 2989648 2990104 -26014552 + DMSAT6 Satellite Satellite 17 470 0 7 607 237 65 0 0 chrUextra 2990534 2990565 -26014091 + (TTG)n Simple_repeat Simple_repeat 2 32 0 7 607 1615 77 0 0 chrUextra 2990779 2991001 -26013655 + Gypsy12_I LTR Gypsy 2449 2670 -2876 7 607 1264 101 0 26 chrUextra 2990992 2991185 -26013471 + Gypsy12_I LTR Gypsy 2811 2998 -2548 7 607 2352 242 78 51 chrUextra 2991285 2992232 -26012424 + Gypsy12_LTR LTR Gypsy 106 1078 -1258 7 607 694 108 0 0 chrUextra 2992871 2992973 -26011683 - STALKER4_LTR LTR Gypsy -15 387 286 7 607 2886 17 0 16 chrUextra 2992968 2993336 -26011320 - STALKER4_I LTR Gypsy -5105 1425 1064 7 607 3909 48 0 0 chrUextra 2993447 2993950 -26010706 - FW_DM LINE Jockey -4187 505 3 7 607 1189 280 11 23 chrUextra 2993949 2994384 -26010272 + Gypsy_I LTR Gypsy 4312 4741 -1766 7 607 1227 92 184 0 chrUextra 2994527 2994766 -26009890 + TAHRE LINE telomeric 7557 7839 -6638 7 607 2126 126 122 47 chrUextra 2994766 2995506 -26009150 + TAHRE LINE telomeric 10013 10451 -12 7 607 385 254 0 0 chrUextra 2996719 2996837 -26007819 + MDG3_I LTR Gypsy 3522 3639 -1347 7 607 1105 310 19 7 chrUextra 2996852 2997391 -26007265 + MDG3_I LTR Gypsy 3693 4237 -749 7 607 875 62 189 114 chrUextra 2997466 2997667 -26006989 + STALKER4_LTR LTR Gypsy 69 284 -118 7 607 4651 49 98 4 chrUextra 2997767 2998731 -26005925 + PROTOP DNA P 949 2002 -2478 7 607 525 307 43 13 chrUextra 2998883 2999117 -26005539 - Copia2_I LTR Copia -758 3404 3164 7 607 2346 135 185 0 chrUextra 2999248 2999826 -26004830 + DMRT1B LINE R1 1492 2176 -3007 7 607 480 0 17 0 chrUextra 2999927 2999987 -26004669 - DM1731_I LTR Copia -3915 61 1 7 607 2738 28 0 0 chrUextra 3000000 3000323 -26004333 - DM1731_LTR LTR Copia -13 323 1 7 607 3956 35 39 0 chrUextra 3000323 3000811 -26003845 - PROTOP DNA P -3973 507 1 7 607 714 11 115 7 chrUextra 3001012 3001580 -26003076 + (TA)n Simple_repeat Simple_repeat 1 629 0 7 607 2749 45 0 0 chrUextra 3001582 3001918 -26002738 + DM1731_LTR LTR Copia 1 336 0 7 607 549 15 15 0 chrUextra 3001918 3001985 -26002671 + DM1731_I LTR Copia 1 68 -3908 7 607 3735 189 24 28 chrUextra 3002088 3003067 -26001589 - SAR_DM Satellite Satellite -836 975 1 7 607 7580 47 15 4 chrUextra 3003174 3004146 -26000510 + IDEFIX_I LTR Gypsy 2429 3411 -2217 7 607 379 324 44 25 chrUextra 3004851 3005215 -25999441 + BURDOCK_I LTR Gypsy 850 1561 -4574 7 607 3964 194 25 18 chrUextra 3005327 3006301 -25998355 + SAR_DM Satellite Satellite 249 1229 -243 7 607 1903 9 0 0 chrUextra 3006407 3006619 -25998037 + LSU-rRNA_Dme rRNA rRNA 3689 3900 0 7 607 262 150 0 0 chrUextra 3006728 3006768 -25997888 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3006820 3006860 -25997796 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3006912 3006952 -25997704 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 253 150 0 0 chrUextra 3007004 3007044 -25997612 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3007096 3007136 -25997520 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 253 150 0 0 chrUextra 3007188 3007228 -25997428 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3007280 3007320 -25997336 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 846 17 32 24 chrUextra 3007487 3007610 -25997046 + NTS_DM Other Other 117 240 0 7 607 1901 13 17 13 chrUextra 3007610 3007849 -25996807 + NTS_DM Other Other 1 240 0 7 607 1222 13 0 26 chrUextra 3007849 3008004 -25996652 + NTS_DM Other Other 1 151 -89 7 607 615 11 0 33 chrUextra 3007999 3008090 -25996566 + NTS_DM Other Other 75 162 -78 7 607 489 131 36 0 chrUextra 3008200 3008284 -25996372 + NTS_DM Other Other 4 90 -150 7 607 2397 83 32 20 chrUextra 3008613 3009029 -25995627 - Gypsy6A_LTR LTR Gypsy 0 420 1 7 607 4527 6 31 0 chrUextra 3009031 3009547 -25995109 - Gypsy6_I LTR Gypsy 0 7012 6481 7 607 2776 133 8 23 chrUextra 3009647 3010132 -25994524 + TAHRE LINE telomeric 9974 10451 -12 7 607 2994 155 0 0 chrUextra 3010130 3010627 -25994029 + HETA LINE telomeric 2709 3205 -2876 7 607 6911 46 19 1 chrUextra 3010744 3011624 -25993032 + DIVER2_I LTR Pao 1547 2442 -1705 7 607 3541 197 67 20 chrUextra 3011809 3012752 -25991904 + SAR_DM Satellite Satellite 278 1264 -208 7 607 970 62 0 0 chrUextra 3012655 3012785 -25991871 - ARS406_DM Unknown Unknown -164 189 60 7 607 8083 32 8 7 chrUextra 3012887 3013867 -25990789 - R1_DM LINE R1 -3604 1752 772 7 75 8497 5 37 1 chrUextra 3013967 3014947 -25989709 + G2_DM LINE Jockey 1491 2505 -597 7 608 8877 1 2 2 chrUextra 3015047 3016027 -25988629 + SSU-rRNA_Dme rRNA rRNA 928 1907 -88 7 608 4670 29 9 9 chrUextra 3016127 3016685 -25987971 - BATUMI_I LTR Pao -1740 6223 5666 7 608 459 52 0 0 chrUextra 3016686 3016744 -25987912 - DMCR1A LINE CR1 -3331 1139 1082 7 608 1041 307 36 28 chrUextra 3017216 3017719 -25986937 - HMSBEAGLE_I LTR Gypsy -900 5629 5123 7 608 286 291 88 73 chrUextra 3017765 3018173 -25986483 - HMSBEAGLE_I LTR Gypsy -1575 4954 4541 7 608 3644 19 0 0 chrUextra 3018286 3018703 -25985953 - ROO_I LTR Pao -795 7461 7045 7 608 4775 12 2 0 chrUextra 3018701 3019265 -25985391 - ROO_I LTR Pao -1382 6874 6310 7 608 1645 190 163 57 chrUextra 3019365 3019911 -25984745 + HETA LINE telomeric 5307 5910 -171 7 608 27 49 0 0 chrUextra 3019921 3019962 -25984694 + AT_rich Low_complexity Low_complexity 1 41 0 7 608 2733 86 21 12 chrUextra 3020451 3021423 -25983233 - DMSAT6 Satellite Satellite -3 980 1 7 608 3683 189 18 20 chrUextra 3021532 3022430 -25982226 + SAR_DM Satellite Satellite 369 1264 -208 7 608 573 28 0 0 chrUextra 3022430 3022502 -25982154 - ARS406_DM Unknown Unknown -195 158 87 7 608 534 43 0 0 chrUextra 3022602 3022671 -25981985 + (TTCTC)n Simple_repeat Simple_repeat 5 73 0 7 608 560 59 0 12 chrUextra 3022671 3022756 -25981900 + (AGATG)n Simple_repeat Simple_repeat 3 87 0 7 608 1620 37 0 2 chrUextra 3022763 3023304 -25981352 + (GAGAA)n Simple_repeat Simple_repeat 1 539 0 7 608 3828 197 19 21 chrUextra 3023684 3024652 -25980004 - SAR_DM Satellite Satellite -261 1211 246 7 608 8155 18 38 0 chrUextra 3024760 3025736 -25978920 - DOC2_DM LINE Jockey -2649 2144 1132 7 608 3261 5 0 5 chrUextra 3025839 3026226 -25978430 + DOC LINE Jockey 4341 4725 0 7 608 277 208 73 24 chrUextra 3026203 3026326 -25978330 + Gypsy12A_LTR LTR Gypsy 1599 1727 -553 7 608 3160 76 13 36 chrUextra 3026340 3026818 -25977838 + Gypsy12_I LTR Gypsy 1 467 -5079 7 608 1054 60 40 0 chrUextra 3026918 3027069 -25977587 - BATUMI_I LTR Pao -1380 6583 6427 7 608 2488 62 0 3 chrUextra 3027092 3027431 -25977225 + BATUMI_I LTR Pao 7303 7640 -323 7 608 1475 62 0 10 chrUextra 3027430 3027626 -25977030 + BATUMI_I LTR Pao 7770 7963 0 7 608 1409 52 134 19 chrUextra 3027648 3027864 -25976792 + BATUMI_LTR LTR Pao 32 272 0 7 608 4483 20 29 0 chrUextra 3027997 3028591 -25976065 + STALKER4_I LTR Gypsy 5920 6530 0 7 608 3188 29 0 5 chrUextra 3028591 3028972 -25975684 + STALKER4_LTR LTR Gypsy 1 379 -23 7 608 2513 123 14 20 chrUextra 3030155 3030594 -25974062 + TAHRE LINE telomeric 10020 10455 -8 7 608 1928 177 31 60 chrUextra 3030593 3031131 -25973525 + HETA LINE telomeric 3244 3704 -2377 7 608 8121 9 8 1 chrUextra 3032317 3033292 -25971364 - Invader2_I LTR Gypsy -2152 2440 1459 7 608 3926 187 16 25 chrUextra 3033393 3034363 -25970293 + SAR_DM Satellite Satellite 212 1172 -300 7 608 2269 12 0 4 chrUextra 3034471 3034728 -25969928 + STALKER4_LTR LTR Gypsy 147 402 0 7 608 345 25 0 0 chrUextra 3034728 3034755 -25969901 + STALKER4_I LTR Gypsy 1 27 -6503 7 608 306 105 0 50 chrUextra 3034755 3034815 -25969841 + Stalker2_I LTR Gypsy 1 57 -7345 7 608 3691 5 0 0 chrUextra 3035041 3035450 -25969206 + STALKER4_I LTR Gypsy 3991 4399 -2131 7 608 1978 59 11 15 chrUextra 3035550 3035810 -25968846 - G5A_DM LINE Jockey -479 2362 2104 7 608 5381 32 46 0 chrUextra 3035809 3036529 -25968127 + DMCR1A LINE CR1 347 1099 -3371 7 608 2036 122 78 0 chrUextra 3036629 3036964 -25967692 + IDEFIX_I LTR Gypsy 3860 4220 -1408 7 608 1404 139 87 21 chrUextra 3036977 3037264 -25967392 + IDEFIX_I LTR Gypsy 4854 5159 -469 7 608 869 47 0 0 chrUextra 3037293 3037399 -25967257 - DMTOM1_LTR LTR Gypsy -304 106 1 7 608 611 199 15 0 chrUextra 3037399 3037517 -25967139 - ZAM_I LTR Gypsy -6843 647 528 7 608 3699 189 39 31 chrUextra 3037715 3038687 -25965969 + SAR_DM Satellite Satellite 57 1036 -436 7 608 536 128 54 18 chrUextra 3038788 3038899 -25965757 - ARS406_DM Unknown Unknown -238 115 1 7 608 3711 185 26 25 chrUextra 3038813 3039766 -25964890 + SAR_DM Satellite Satellite 198 1151 -321 7 608 6007 30 24 13 chrUextra 3039866 3040845 -25963811 - Invader4_I LTR Gypsy -104 2309 1252 7 608 455 29 0 42 chrUextra 3040945 3041013 -25963643 - BATUMI_I LTR Pao -897 7066 7002 7 608 5444 14 21 6 chrUextra 3041013 3041669 -25962987 - BATUMI_I LTR Pao 0 7963 7298 7 608 1889 30 13 0 chrUextra 3041687 3041924 -25962732 + BATUMI_I LTR Pao 6427 6666 -1297 7 608 8332 24 10 0 chrUextra 3042024 3043003 -25961653 + R1_DM LINE R1 4039 5027 -329 7 608 1879 193 5 5 chrUextra 3043104 3043520 -25961136 - SAR_DM Satellite Satellite -561 911 496 7 608 1917 181 4 9 chrUextra 3043535 3043950 -25960706 - SAR_DM Satellite Satellite -569 542 41 7 608 777 60 0 0 chrUextra 3043950 3044050 -25960606 + ARS406_DM Unknown Unknown 90 189 -164 7 608 1917 181 4 9 chrUextra 3044050 3044081 -25960575 - SAR_DM Satellite Satellite -569 40 1 7 608 727 111 0 8 chrUextra 3044182 3044300 -25960356 - ARS406_DM Unknown Unknown -236 117 1 7 608 3939 181 13 27 chrUextra 3044206 3045143 -25959513 + SAR_DM Satellite Satellite 195 1118 -354 7 608 378 206 0 19 chrUextra 3045057 3045161 -25959495 - XDMR_DM Unknown Unknown 0 360 259 7 608 2350 7 62 0 chrUextra 3045261 3045550 -25959106 - IDEFIX_LTR LTR Gypsy -287 307 1 7 608 5548 10 35 1 chrUextra 3045550 3046238 -25958418 - IDEFIX_I LTR Gypsy 0 5628 4918 7 608 699 65 0 0 chrUextra 3046341 3046433 -25958223 + TART LINE telomeric 10572 10663 -3814 7 608 4133 62 3 24 chrUextra 3046432 3047024 -25957632 + TART LINE telomeric 630 1209 -13268 7 608 2223 32 42 24 chrUextra 3047024 3047311 -25957345 + PROTOP_A DNA P 1 292 -813 7 608 4103 39 86 0 chrUextra 3047418 3047962 -25956694 + QUASIMODO_I LTR Gypsy 2312 2902 -3158 7 608 3320 46 2 0 chrUextra 3047956 3048394 -25956262 + QUASIMODO_I LTR Gypsy 3168 3606 -2454 7 608 1554 11 0 0 chrUextra 3048892 3049072 -25955584 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 7 608 333 62 0 0 chrUextra 3049074 3049122 -25955534 + (GAGAA)n Simple_repeat Simple_repeat 4 51 0 7 608 303 25 0 0 chrUextra 3049122 3049162 -25955494 + MDG3_LTR LTR Gypsy 1 40 -227 7 608 1779 14 0 9 chrUextra 3049574 3049792 -25954864 + FW_DM LINE Jockey 4477 4692 0 7 608 3377 177 12 13 chrUextra 3049803 3050552 -25954104 + SAR_DM Satellite Satellite 326 1073 -399 7 608 1158 123 0 0 chrUextra 3050652 3050888 -25953768 + (TA)n Simple_repeat Simple_repeat 1 236 0 7 608 1387 11 17 17 chrUextra 3050901 3051079 -25953577 - DM297_LTR LTR Gypsy -236 178 1 7 608 3061 105 83 0 chrUextra 3051077 3051592 -25953064 - DM176_I LTR Gypsy 0 6420 5863 7 608 410 75 0 0 chrUextra 3051577 3051630 -25953026 - DM297_I LTR Gypsy -1660 4507 4455 7 608 4585 2 0 0 chrUextra 3051732 3052239 -25952417 - FW_DM LINE Jockey -4185 507 1 7 608 2853 41 126 35 chrUextra 3052255 3052708 -25951948 + ROO_I LTR Pao 285 778 -7478 7 608 4263 14 27 2 chrUextra 3052809 3053324 -25951332 + IDEFIX_LTR LTR Gypsy 67 594 0 7 608 401 73 19 0 chrUextra 3053324 3053396 -25951260 + MDG1_I LTR Gypsy 6543 6596 0 7 608 234 202 81 23 chrUextra 3053387 3053473 -25951183 + TABOR_LTR LTR Gypsy 1 91 -415 7 608 6946 110 5 1 chrUextra 3053887 3054864 -25949792 - HMSBEAGLE_I LTR Gypsy -2034 4495 3515 7 608 22 56 0 0 chrUextra 3054998 3055034 -25949622 + AT_rich Low_complexity Low_complexity 1 36 0 7 608 362 191 25 83 chrUextra 3055079 3055199 -25949457 + Copia_I LTR Copia 4401 4513 -80 7 608 502 269 72 9 chrUextra 3056512 3056733 -25947923 - MICROPIA_I LTR Gypsy -886 3590 3356 7 608 308 315 25 15 chrUextra 3056815 3057018 -25947638 + Gypsy10_I LTR Gypsy 2223 2427 -2851 7 608 353 335 37 46 chrUextra 3057768 3058098 -25946558 + Gypsy6_I LTR Gypsy 2920 3547 -2982 7 608 1656 18 13 18 chrUextra 3058199 3058424 -25946232 - NTS_DM Other Other -16 224 1 7 608 1408 20 20 20 chrUextra 3058424 3058627 -25946029 - NTS_DM Other Other 0 240 38 7 608 3367 5 7 7 chrUextra 3058642 3059056 -25945600 + DM297_LTR LTR Gypsy 1 414 0 7 608 954 17 8 0 chrUextra 3059056 3059176 -25945480 + DM297_I LTR Gypsy 1 121 -6046 7 608 2493 191 10 9 chrUextra 3059277 3060250 -25944406 - SAR_DM Satellite Satellite -645 973 1 7 608 3676 193 14 20 chrUextra 3060362 3061328 -25943328 - SAR_DM Satellite Satellite -300 1172 212 7 608 4214 34 20 0 chrUextra 3061432 3061968 -25942688 + G2_DM LINE Jockey 2547 3093 -9 7 608 3259 50 0 5 chrUextra 3061969 3062409 -25942247 - G2_DM LINE Jockey -574 2528 2091 7 608 4141 64 0 5 chrUextra 3062510 3063094 -25941562 + IDEFIX_I LTR Gypsy 378 958 -4670 7 608 2962 19 0 58 chrUextra 3063094 3063488 -25941168 + Gypsy3_LTR LTR Gypsy 1 371 -27 7 608 2923 6 0 0 chrUextra 3063588 3063930 -25940726 + STALKER4_I LTR Gypsy 1688 2029 -4501 7 608 5196 17 0 0 chrUextra 3063930 3064566 -25940090 + STALKER4_I LTR Gypsy 2334 2969 -3561 7 608 3464 8 0 0 chrUextra 3064666 3065068 -25939588 - DOC LINE Jockey -4292 433 32 7 608 2377 173 9 22 chrUextra 3065093 3065643 -25939013 - SAR_DM Satellite Satellite -512 960 418 7 608 555 290 68 35 chrUextra 3065766 3066580 -25938076 + TV1I LTR Gypsy 738 1558 -4405 7 608 751 103 8 0 chrUextra 3066821 3066947 -25937709 - ARS406_DM Unknown Unknown -226 127 1 7 608 3702 185 11 21 chrUextra 3066850 3067789 -25936867 + SAR_DM Satellite Satellite 191 1119 -353 7 608 275 188 16 0 chrUextra 3067734 3067798 -25936858 - XDMR Unknown Unknown 0 361 297 7 608 22 35 0 0 chrUextra 3068244 3068273 -25936383 + AT_rich Low_complexity Low_complexity 1 29 0 7 608 40 21 0 0 chrUextra 3068671 3068718 -25935938 + AT_rich Low_complexity Low_complexity 1 47 0 7 608 7822 28 16 1 chrUextra 3068975 3069952 -25934704 - R1_DM LINE R1 -1331 4025 3034 7 608 5405 48 20 90 chrUextra 3070074 3071029 -25933627 + BATUMI_I LTR Pao 1 888 -7075 7 608 673 106 59 7 chrUextra 3071515 3071667 -25932989 + GA-rich Low_complexity Low_complexity 5 164 0 7 608 388 320 17 27 chrUextra 3072643 3072958 -25931698 + BURDOCK_I LTR Gypsy 850 992 -4868 7 608 3574 193 16 18 chrUextra 3073288 3074260 -25930396 - SAR_DM Satellite Satellite -396 969 1 7 608 737 122 0 63 chrUextra 3074485 3074643 -25930013 + Gypsy8_I LTR Gypsy 72 219 -4128 7 608 362 105 0 0 chrUextra 3075280 3075337 -25929319 - DNAREP1_DM LINE Penelope 0 594 538 7 608 3706 186 44 14 chrUextra 3075472 3076408 -25928248 + SAR_DM Satellite Satellite 266 1229 -243 7 608 896 77 42 0 chrUextra 3076578 3076721 -25927935 + I_DM LINE I 4996 5144 -1087 7 608 3372 20 69 0 chrUextra 3076719 3077368 -25927288 + DMCR1A LINE CR1 1291 1984 -2486 7 608 1058 44 0 0 chrUextra 3077356 3077491 -25927165 + DMCR1A LINE CR1 3416 3550 -920 7 608 3771 42 64 0 chrUextra 3077591 3078110 -25926546 + Transib5 DNA Transib 1859 2410 -591 7 608 779 88 18 0 chrUextra 3078113 3078227 -25926429 - DMCR1A LINE CR1 -2 4468 4353 7 608 2442 54 0 12 chrUextra 3078229 3078568 -25926088 - DMCR1A LINE CR1 -236 4234 3900 7 608 7352 55 9 0 chrUextra 3078674 3079645 -25925011 - IDEFIX_I LTR Gypsy -2968 2660 1681 7 608 4319 4 0 0 chrUextra 3079770 3080277 -25924379 - DM176_LTR LTR Gypsy 0 507 1 7 608 3766 0 0 0 chrUextra 3080278 3080712 -25923944 - ACCORD_LTR LTR Gypsy -121 437 4 7 608 471 207 0 0 chrUextra 3080837 3080982 -25923674 + (CATAA)n Simple_repeat Simple_repeat 2 146 0 7 608 555 224 0 4 chrUextra 3080984 3081235 -25923421 + (AATAG)n Simple_repeat Simple_repeat 1 249 0 7 608 288 70 0 0 chrUextra 3081268 3081311 -25923345 + (TATAA)n Simple_repeat Simple_repeat 4 46 0 7 608 1329 80 0 4 chrUextra 3081318 3081799 -25922857 + (AATAG)n Simple_repeat Simple_repeat 1 478 0 7 608 399 216 0 18 chrUextra 3081899 3082012 -25922644 - SAR_DM Satellite Satellite -1170 302 192 7 608 1005 95 0 0 chrUextra 3081916 3082074 -25922582 + ARS406_DM Unknown Unknown 1 158 -195 7 608 3008 187 7 8 chrUextra 3082081 3082794 -25921862 - SAR_DM Satellite Satellite -569 903 192 7 608 692 124 0 0 chrUextra 3082698 3082819 -25921837 + ARS406_DM Unknown Unknown 1 121 -232 7 608 491 29 15 0 chrUextra 3082808 3082876 -25921780 + ARS406_DM Unknown Unknown 78 146 -207 7 608 2403 305 24 12 chrUextra 3083017 3083953 -25920703 - MICROPIA_I LTR Gypsy -1261 3215 2269 7 608 543 41 0 0 chrUextra 3084256 3084353 -25920303 + (TTTA)n Simple_repeat Simple_repeat 1 97 0 7 608 1545 36 0 0 chrUextra 3084353 3084683 -25919973 + (TAAA)n Simple_repeat Simple_repeat 1 330 0 7 608 2889 6 0 0 chrUextra 3084692 3085029 -25919627 + STALKER4_LTR LTR Gypsy 1 337 -65 7 608 2066 0 0 16 chrUextra 3085129 3085378 -25919278 + Copia_I LTR Copia 4349 4593 0 7 608 2286 4 0 0 chrUextra 3085378 3085654 -25919002 + Copia_LTR LTR Copia 1 276 0 7 608 3845 13 0 0 chrUextra 3085654 3086105 -25918551 - MDG3_I LTR Gypsy -4196 790 340 7 608 2765 37 0 0 chrUextra 3086205 3086554 -25918102 + DOC3_DM LINE Jockey 2721 3069 -1671 7 608 1348 53 0 21 chrUextra 3086553 3086747 -25917909 - DMCR1A LINE CR1 -4279 191 2 7 608 1443 61 142 0 chrUextra 3087281 3087577 -25917079 + TART LINE telomeric 2181 2518 -11959 7 608 3858 15 2 0 chrUextra 3087580 3088045 -25916611 + PROTOP_A DNA P 1 466 -639 7 608 1856 5 0 0 chrUextra 3088045 3088257 -25916399 - PROTOP DNA P 0 4480 4269 7 608 3501 154 85 89 chrUextra 3088357 3089333 -25915323 + BATUMI_I LTR Pao 4682 5653 -2310 7 608 2599 159 96 7 chrUextra 3089458 3090306 -25914350 - DM176_I LTR Gypsy -1748 4672 3704 7 608 523 107 0 0 chrUextra 3090334 3090409 -25914247 - DM176_I LTR Gypsy -2814 3606 3532 7 608 2291 50 85 0 chrUextra 3090509 3090828 -25913828 + Baggins1 LINE LOA 5092 5437 -16 7 608 379 311 0 0 chrUextra 3091293 3091441 -25913215 + DIVER_I LTR Pao 4689 4836 -807 7 608 5629 22 0 154 chrUextra 3091585 3092561 -25912095 + MDG3_I LTR Gypsy 1213 2038 -2948 7 608 5823 106 4 6 chrUextra 3094813 3095789 -25908867 + BATUMI_I LTR Pao 4311 5282 -2632 7 608 7397 55 7 2 chrUextra 3095889 3096865 -25907791 - BS2 LINE Jockey -147 4574 3594 7 608 3713 176 16 14 chrUextra 3096975 3097941 -25906715 - SAR_DM Satellite Satellite -431 968 1 7 608 186 133 0 0 chrUextra 3098067 3098097 -25906559 + (CTG)n Simple_repeat Simple_repeat 3 32 0 7 608 661 188 78 58 chrUextra 3099182 3099425 -25905231 + STALKER4_I LTR Gypsy 885 1132 -5398 7 608 5202 35 0 0 chrUextra 3099442 3100093 -25904563 + FW_DM LINE Jockey 4 654 -4038 7 608 2383 115 18 13 chrUextra 3100196 3101169 -25903487 + DMSAT6 Satellite Satellite 1 976 -152 7 608 3379 5 0 0 chrUextra 3101269 3101666 -25902990 + DM176_LTR LTR Gypsy 111 507 0 7 608 3220 84 14 10 chrUextra 3101675 3102180 -25902476 + ACCORD2_I LTR Gypsy 1863 2369 -4843 7 608 412 109 0 0 chrUextra 3102181 3102245 -25902411 + ACCORD2_I LTR Gypsy 2676 2739 -4473 7 608 4574 2 0 0 chrUextra 3102345 3102879 -25901777 - FW_DM LINE Jockey -1265 3427 2894 7 608 3723 9 2 0 chrUextra 3102877 3103320 -25901336 + DOC LINE Jockey 2712 3155 -1570 7 608 377 204 9 18 chrUextra 3103425 3103535 -25901121 + XDMR_DM Unknown Unknown 252 360 0 7 608 3566 186 9 16 chrUextra 3103449 3104386 -25900270 - SAR_DM Satellite Satellite -353 931 1 7 608 3738 7 9 9 chrUextra 3104495 3104961 -25899695 + DOC LINE Jockey 4257 4722 -3 7 608 2147 260 0 0 chrUextra 3104954 3105470 -25899186 + Gypsy6_I LTR Gypsy 3770 4285 -2727 7 608 3515 195 54 14 chrUextra 3105572 3106535 -25898121 + SAR_DM Satellite Satellite 230 1230 -242 7 608 533 68 0 0 chrUextra 3106472 3106545 -25898111 - ARS406_DM Unknown Unknown -164 189 117 7 608 3581 24 0 0 chrUextra 3106647 3107073 -25897583 - R2_DM LINE R2 -1250 2357 1932 7 608 3551 36 41 2 chrUextra 3107095 3107563 -25897093 - R1_DM LINE R1 -69 5287 4802 7 608 464 17 0 17 chrUextra 3107561 3107620 -25897036 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2598 7 608 2834 31 0 6 chrUextra 3107720 3108073 -25896583 + R1_DM LINE R1 5006 5356 0 7 608 4259 57 2 22 chrUextra 3108106 3108695 -25895961 + R1_DM LINE R1 1 577 -4779 7 608 335 296 19 19 chrUextra 3109509 3109671 -25894985 + MDG3_I LTR Gypsy 3263 3424 -1562 7 608 2596 111 26 10 chrUextra 3110945 3111920 -25892736 + DMSAT6 Satellite Satellite 1 990 -64 7 608 584 342 61 34 chrUextra 3112225 3112927 -25891729 + Invader3_I LTR Gypsy 2309 3029 -1859 7 608 2318 120 22 0 chrUextra 3113102 3113470 -25891186 + DMRT1C LINE R1 2786 3161 -2282 7 608 1610 65 5 0 chrUextra 3113455 3113655 -25891001 + DMRT1C LINE R1 3923 4123 -1320 7 608 2771 63 57 5 chrUextra 3113652 3114036 -25890620 + DMRT1C LINE R1 4364 4767 -676 7 608 4838 29 12 8 chrUextra 3114451 3115037 -25889619 + DMCR1A LINE CR1 4 591 -3879 7 608 960 26 0 0 chrUextra 3115032 3115145 -25889511 + DMCR1A LINE CR1 1198 1310 -3160 7 608 2946 95 2 19 chrUextra 3115245 3115674 -25888982 + Gypsy12_I LTR Gypsy 149 570 -4976 7 608 3071 102 20 53 chrUextra 3115702 3116209 -25888447 + Gypsy12_LTR LTR Gypsy 1847 2336 0 7 608 1685 278 7 7 chrUextra 3116320 3116878 -25887778 + Copia_I LTR Copia 1722 2279 -2314 7 608 426 197 0 0 chrUextra 3117149 3117220 -25887436 + HETA LINE telomeric 4533 4603 -1478 7 608 5497 20 52 5 chrUextra 3117395 3118370 -25886286 - BATUMI_I LTR Pao -1715 6248 5228 7 608 4206 200 11 22 chrUextra 3118470 3119423 -25885233 + SAR_DM Satellite Satellite 1 942 -217 7 608 8182 29 29 0 chrUextra 3119545 3120520 -25884136 - FW_DM LINE Jockey -1247 3445 2443 7 608 5169 23 2 2 chrUextra 3120625 3121227 -25883429 - R1_DM LINE R1 -1454 3902 3301 7 608 2974 56 0 5 chrUextra 3121220 3121595 -25883061 - R1_DM LINE R1 -4745 611 239 7 608 62 26 0 0 chrUextra 3122136 3122212 -25882444 + AT_rich Low_complexity Low_complexity 1 76 0 7 608 22 35 0 0 chrUextra 3122505 3122534 -25882122 + AT_rich Low_complexity Low_complexity 1 29 0 7 608 564 54 0 0 chrUextra 3122770 3122844 -25881812 - ACCORD2_I LTR Gypsy -559 6653 6580 7 608 3545 58 68 0 chrUextra 3122834 3123402 -25881254 - ACCORD2_I LTR Gypsy -4186 3026 2420 7 608 762 113 59 53 chrUextra 3123404 3123591 -25881065 - ACCORD2_I LTR Gypsy -5160 2052 1865 7 608 3796 26 46 0 chrUextra 3123845 3124300 -25880356 - PROTOP_A DNA P -629 476 1 7 608 1475 0 0 0 chrUextra 3124920 3125079 -25879577 - LSU-rRNA_Dme rRNA rRNA -3741 159 1 7 608 21 95 0 0 chrUextra 3125091 3125154 -25879502 + AT_rich Low_complexity Low_complexity 1 63 0 7 608 34 24 0 0 chrUextra 3125367 3125408 -25879248 + AT_rich Low_complexity Low_complexity 1 41 0 7 608 4784 2 2 0 chrUextra 3125995 3126518 -25878138 - FW_DM LINE Jockey -3500 1192 669 7 608 3010 0 0 0 chrUextra 3126511 3126835 -25877821 + R1_DM LINE R1 5033 5356 0 7 608 1256 7 0 0 chrUextra 3126833 3126970 -25877686 + LSU-rRNA_Dme rRNA rRNA 2640 2776 -1124 7 608 1827 98 11 30 chrUextra 3127070 3127334 -25877322 + Gypsy12_I LTR Gypsy 4710 4968 -578 7 608 793 78 252 14 chrUextra 3127326 3127465 -25877191 + Gypsy12_I LTR Gypsy 5305 5476 -70 7 608 1055 275 28 89 chrUextra 3127481 3128044 -25876612 + Gypsy12_LTR LTR Gypsy 475 1003 -1333 7 608 8462 25 11 0 chrUextra 3128145 3129120 -25875536 + R1_DM LINE R1 1619 2604 -2752 7 608 2946 15 0 0 chrUextra 3129220 3129559 -25875097 + Copia2_I LTR Copia 3824 4162 0 7 608 1820 0 0 0 chrUextra 3129559 3129757 -25874899 + Copia2_LTR_DM LTR Copia 1 198 0 7 608 3594 11 0 2 chrUextra 3129757 3130195 -25874461 + Copia2_I LTR Copia 1 487 -3675 7 608 230 274 24 12 chrUextra 3130883 3130968 -25873688 + Gypsy_DS LTR Gypsy 1361 1446 -6076 7 608 332 343 0 0 chrUextra 3131116 3131259 -25873397 + Gypsy7_I LTR Gypsy 782 924 -4060 7 608 23 68 0 0 chrUextra 3131802 3131846 -25872810 + AT_rich Low_complexity Low_complexity 1 44 0 7 608 26 0 0 0 chrUextra 3132881 3132907 -25871749 + AT_rich Low_complexity Low_complexity 1 26 0 7 608 2431 7 0 0 chrUextra 3133014 3133290 -25871366 - Copia_LTR LTR Copia 0 276 1 7 608 1205 0 0 0 chrUextra 3133290 3133419 -25871237 - Copia_I LTR Copia 0 4593 4465 7 608 2957 3 0 0 chrUextra 3133519 3133840 -25870816 - FW_DM LINE Jockey -4371 321 1 7 608 2408 39 3 17 chrUextra 3133848 3134174 -25870482 + PROTOP_A DNA P 742 1104 -1 7 608 1819 15 0 0 chrUextra 3134292 3134493 -25870163 + PROTOP_A DNA P 1 201 -904 7 608 3050 119 17 21 chrUextra 3134593 3135567 -25869089 - ROVER-I_DM LTR Gypsy -621 5963 4576 7 608 2545 4 4 0 chrUextra 3135668 3135946 -25868710 - FW_DM LINE Jockey -4413 279 1 7 608 2121 0 0 4 chrUextra 3135957 3136202 -25868454 + POGO DNA Pogo 1871 2114 -7 7 608 999 39 0 0 chrUextra 3136202 3136330 -25868326 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 7 608 1620 0 0 0 chrUextra 3136332 3136641 -25868015 + (TTCTC)n Simple_repeat Simple_repeat 1 309 0 7 608 1468 6 0 12 chrUextra 3136743 3136910 -25867746 - CIRCE LINE Composite -2675 3681 3517 7 608 6304 80 16 0 chrUextra 3136910 3137715 -25866941 + Gypsy12_I LTR Gypsy 2975 3792 -1754 7 608 540 116 0 0 chrUextra 3137835 3137921 -25866735 + (CTG)n Simple_repeat Simple_repeat 1 86 0 7 608 4330 13 12 21 chrUextra 3137921 3138664 -25865992 - ROO_I LTR Pao -7616 640 1 7 608 1131 8 0 0 chrUextra 3138664 3138789 -25865867 - ROO_LTR LTR Pao 0 428 304 7 608 659 0 0 0 chrUextra 3138889 3138959 -25865697 - NTS_DM Other Other -170 70 1 7 608 1992 4 17 13 chrUextra 3138959 3139198 -25865458 - NTS_DM Other Other 0 240 1 7 608 1946 0 17 21 chrUextra 3139198 3139439 -25865217 - NTS_DM Other Other 0 240 1 7 608 1938 8 17 17 chrUextra 3139439 3139679 -25864977 - NTS_DM Other Other 0 240 1 7 608 1324 22 22 22 chrUextra 3139679 3139863 -25864793 - NTS_DM Other Other 0 240 57 7 608 3329 35 0 0 chrUextra 3139963 3140360 -25864296 - MAX_I LTR Pao -4639 3275 2879 7 608 2011 78 3 21 chrUextra 3141059 3141349 -25863307 + PROTOP_A DNA P 194 478 -627 7 608 1730 85 0 0 chrUextra 3141326 3141561 -25863095 + HOBO DNA hAT 330 564 -2452 7 608 3467 68 2 7 chrUextra 3141553 3142011 -25862645 + HOBO DNA hAT 385 840 -2176 7 608 1620 29 0 2 chrUextra 3142111 3143085 -25861571 + (G)n Simple_repeat Simple_repeat 1 972 0 7 608 4757 2 0 2 chrUextra 3143185 3143705 -25860951 + R1_DM LINE R1 4838 5356 0 7 608 4234 2 0 0 chrUextra 3143703 3144159 -25860497 + LSU-rRNA_Dme rRNA rRNA 2640 3095 -805 7 608 4149 194 13 22 chrUextra 3144260 3145231 -25859425 - SAR_DM Satellite Satellite -305 1167 205 7 9 3875 203 13 32 chrUextra 3145333 3146291 -25858365 + SAR_DM Satellite Satellite 1 939 -203 7 609 8302 16 39 1 chrUextra 3146410 3147381 -25857275 - R1_DM LINE R1 -1120 4236 3229 7 609 338 147 59 59 chrUextra 3147481 3147582 -25857074 + XDMR_DM Unknown Unknown 260 360 0 7 609 4107 172 15 28 chrUextra 3147496 3148448 -25856208 - SAR_DM Satellite Satellite -354 1118 180 7 609 4008 179 89 26 chrUextra 3148555 3149527 -25855129 + Gypsy12_LTR LTR Gypsy 1179 2212 -124 7 609 1945 36 4 27 chrUextra 3150701 3150960 -25853696 + BATUMI_I LTR Pao 7032 7284 -679 7 609 3477 154 122 28 chrUextra 3150960 3151673 -25852983 + TAHRE LINE telomeric 403 1182 -9281 7 609 4578 134 97 41 chrUextra 3151774 3152746 -25851910 + TART LINE telomeric 9576 10601 -3876 7 609 445 339 74 18 chrUextra 3152957 3153293 -25851363 + ACCORD_I LTR Gypsy 2817 3171 -3117 7 609 549 313 8 2 chrUextra 3153286 3153479 -25851177 + Gypsy5_I LTR Gypsy 2747 3113 -3307 7 609 32 0 0 0 chrUextra 3154050 3154082 -25850574 + AT_rich Low_complexity Low_complexity 1 32 0 7 609 4737 8 2 4 chrUextra 3154366 3154892 -25849764 + LSU-rRNA_Dme rRNA rRNA 905 1429 -2471 7 609 7639 47 11 11 chrUextra 3154992 3155965 -25848691 + R1_DM LINE R1 40 1012 -4344 7 609 8499 21 0 0 chrUextra 3156066 3157034 -25847622 - FW_DM LINE Jockey -1066 3626 2659 7 609 4132 23 4 2 chrUextra 3157138 3157610 -25847046 - Gypsy_LTR LTR Gypsy -9 473 1 7 609 2069 18 0 0 chrUextra 3157610 3157838 -25846818 + Invader1_LTR LTR Gypsy 196 423 0 7 609 2526 11 0 0 chrUextra 3157838 3158111 -25846545 + Invader1_I LTR Gypsy 1 273 -2913 7 609 3879 197 17 23 chrUextra 3158211 3159184 -25845472 + SAR_DM Satellite Satellite 1 967 -216 7 609 5100 101 1 6 chrUextra 3160357 3161053 -25843603 + Gypsy12_I LTR Gypsy 1386 2078 -3468 7 609 325 125 0 0 chrUextra 3161059 3161107 -25843549 + Gypsy12_I LTR Gypsy 2405 2452 -3094 7 609 1532 117 5 0 chrUextra 3161116 3161329 -25843327 + Gypsy12_I LTR Gypsy 2689 2902 -2644 7 609 6040 6 95 1 chrUextra 3161433 3162403 -25842253 - Invader3_I LTR Gypsy -3041 1847 787 7 609 751 0 0 0 chrUextra 3162503 3162587 -25842069 + NTS_DM Other Other 50 133 -107 7 609 1350 18 0 6 chrUextra 3162587 3162752 -25841904 + NTS_DM Other Other 38 201 -39 7 609 936 9 0 27 chrUextra 3162804 3162916 -25841740 + NTS_DM Other Other 25 133 -107 7 609 1320 18 0 12 chrUextra 3162916 3163082 -25841574 + NTS_DM Other Other 38 201 -39 7 609 1408 23 0 22 chrUextra 3163134 3163315 -25841341 + NTS_DM Other Other 25 201 -39 7 609 21 57 0 0 chrUextra 3163315 3163350 -25841306 + AT_rich Low_complexity Low_complexity 1 35 0 7 609 660 42 10 50 chrUextra 3163376 3163476 -25841180 + NTS_DM Other Other 25 120 -120 7 609 7786 45 3 0 chrUextra 3163576 3164492 -25840164 + BS2 LINE Jockey 3125 4043 -678 7 609 2473 171 37 10 chrUextra 3164684 3165169 -25839487 - TART_B1 LINE telomeric -9359 1295 798 7 609 546 104 37 111 chrUextra 3165164 3165272 -25839384 - TART LINE telomeric -7157 7320 7221 7 609 1789 124 0 52 chrUextra 3165284 3165590 -25839066 - TART LINE telomeric -10505 3972 3683 7 609 248 108 0 0 chrUextra 3165585 3165622 -25839034 - TART LINE telomeric -11115 3362 3326 7 609 8260 23 7 3 chrUextra 3165722 3166695 -25837961 + ACCORD2_I LTR Gypsy 5551 6527 -685 7 609 4581 2 0 0 chrUextra 3166795 3167288 -25837368 + LSU-rRNA_Dme rRNA rRNA 2087 2579 -1321 7 609 4505 6 2 2 chrUextra 3167276 3167768 -25836888 + R2_DM LINE R2 1641 2132 -1475 7 609 1147 35 0 21 chrUextra 3167868 3168013 -25836643 - TAHRE LINE telomeric -9164 1299 1158 7 609 7366 13 1 0 chrUextra 3168018 3168841 -25835815 - DOC2_DM LINE Jockey 0 4793 3970 7 609 8458 30 0 1 chrUextra 3168941 3169914 -25834742 + R1_DM LINE R1 1521 2492 -2864 7 609 5349 67 0 14 chrUextra 3170014 3170731 -25833925 - IDEFIX_I LTR Gypsy -3963 1665 959 7 609 1817 69 32 4 chrUextra 3170738 3170986 -25833670 - IDEFIX_I LTR Gypsy -4808 820 566 7 609 3400 15 0 0 chrUextra 3171086 3171486 -25833170 - ROO_I LTR Pao -1252 7004 6605 7 609 4968 21 0 0 chrUextra 3171486 3172058 -25832598 - ROO_I LTR Pao -5054 3202 2631 7 609 8275 29 42 0 chrUextra 3172158 3173130 -25831526 - R1_DM LINE R1 -2024 3332 2320 7 609 7356 42 3 52 chrUextra 3173230 3174202 -25830454 + Gypsy12_LTR LTR Gypsy 428 1351 -985 7 609 2530 73 20 52 chrUextra 3174302 3174707 -25829949 - DM297_LTR LTR Gypsy -22 392 1 7 609 3813 55 37 12 chrUextra 3174707 3175274 -25829382 - DM297_I LTR Gypsy 0 6167 5587 7 609 2007 49 4 8 chrUextra 3175374 3175621 -25829035 + NINJA_LTR LTR Pao 72 317 0 7 609 5387 34 10 39 chrUextra 3175621 3176346 -25828310 + NINJA_I LTR Pao 1 704 -5307 7 609 5919 24 0 15 chrUextra 3176446 3177166 -25827490 - TAHRE LINE telomeric -9735 728 20 7 609 267 93 0 0 chrUextra 3177143 3177186 -25827470 - TAHRE LINE telomeric 0 10463 10421 7 609 1752 29 0 0 chrUextra 3177208 3177418 -25827238 - TAHRE LINE telomeric -9 10454 10245 7 609 1332 12 0 78 chrUextra 3177518 3177697 -25826959 - MDG3_LTR LTR Gypsy -102 165 1 7 609 1319 33 17 17 chrUextra 3177697 3177856 -25826800 + FW_DM LINE Jockey 1668 1902 -2790 7 609 4387 6 0 0 chrUextra 3178590 3179075 -25825581 + FW_DM LINE Jockey 4208 4692 0 7 609 3539 57 6 0 chrUextra 3179079 3179551 -25825105 - MDG3_I LTR Gypsy -2893 2093 1619 7 609 2655 72 35 35 chrUextra 3179662 3180634 -25824022 + DMSAT6 Satellite Satellite 1 972 -28 7 609 430 20 0 0 chrUextra 3180734 3180784 -25823872 - R1_DM LINE R1 -748 4608 4559 7 609 5463 16 25 3 chrUextra 3180782 3181419 -25823237 - R1_DM LINE R1 -1270 4086 3436 7 609 2372 40 98 0 chrUextra 3181409 3181706 -25822950 - R1_DM LINE R1 -2076 3280 2955 7 609 479 172 9 57 chrUextra 3182896 3183001 -25821655 - Gypsy12_LTR LTR Gypsy -2236 100 1 7 609 2932 87 87 2 chrUextra 3183000 3183404 -25821252 - Gypsy12_I LTR Gypsy 0 5546 5109 7 609 3487 69 0 18 chrUextra 3183397 3183839 -25820817 - Gypsy12_I LTR Gypsy -592 4954 4521 7 609 261 98 0 0 chrUextra 3184462 3184503 -25820153 + (CTG)n Simple_repeat Simple_repeat 2 42 0 7 609 7117 49 79 10 chrUextra 3185022 3185994 -25818662 - PROTOP_A DNA P -55 1050 12 7 609 8204 35 0 15 chrUextra 3186094 3187066 -25817590 - BATUMI_I LTR Pao -1722 6241 5285 7 609 6891 31 5 5 chrUextra 3187275 3188138 -25816518 + PROTOP_A DNA P 1 994 -111 7 609 2723 200 41 14 chrUextra 3188240 3189209 -25815447 + SAR_DM Satellite Satellite 1 995 -208 7 609 210 143 0 0 chrUextra 3189616 3189651 -25815005 + (CAA)n Simple_repeat Simple_repeat 1 35 0 7 609 23 0 0 0 chrUextra 3190108 3190131 -25814525 + AT_rich Low_complexity Low_complexity 1 23 0 7 609 348 230 0 20 chrUextra 3190380 3190482 -25814174 + XDMR_DM Unknown Unknown 261 360 0 7 609 3834 191 26 19 chrUextra 3190396 3191316 -25813340 - SAR_DM Satellite Satellite -354 1118 192 7 609 898 84 0 8 chrUextra 3191219 3191351 -25813305 + ARS406_DM Unknown Unknown 1 131 -222 7 609 1739 5 0 0 chrUextra 3191451 3191639 -25813017 + DIVER_I LTR Pao 5456 5643 0 7 609 2040 5 0 0 chrUextra 3191639 3191863 -25812793 + DIVER_LTR LTR Pao 1 224 0 7 609 285 322 20 20 chrUextra 3192268 3192414 -25812242 - Gypsy4_I LTR Gypsy -2815 3473 3328 7 609 271 264 0 0 chrUextra 3192534 3192621 -25812035 - Copia_I LTR Copia -1055 3538 3452 7 609 23 0 0 0 chrUextra 3192802 3192825 -25811831 + AT_rich Low_complexity Low_complexity 1 23 0 7 609 758 280 13 13 chrUextra 3193012 3193316 -25811340 - Copia_I LTR Copia -2314 2279 1976 7 609 1323 68 62 0 chrUextra 3193316 3193493 -25811163 + BS2 LINE Jockey 2722 2909 -1812 7 609 3889 188 18 25 chrUextra 3193616 3194528 -25810128 + SAR_DM Satellite Satellite 326 1230 -242 7 609 734 31 62 0 chrUextra 3194467 3194564 -25810092 - ARS406_DM Unknown Unknown -166 187 85 7 609 7808 55 5 8 chrUextra 3194664 3195635 -25809021 - DMCR1A LINE CR1 -2570 1900 933 7 609 1186 0 0 0 chrUextra 3196296 3196423 -25808233 - DM1731_I LTR Copia -1292 2684 2558 7 609 3130 38 0 0 chrUextra 3196807 3197174 -25807482 - STALKER4_LTR LTR Gypsy -35 367 1 7 609 4018 60 18 5 chrUextra 3197174 3197772 -25806884 - STALKER4_I LTR Gypsy 0 6530 5925 7 609 8382 20 16 2 chrUextra 3197877 3198848 -25805808 - R1_DM LINE R1 -1192 4164 3180 7 609 3748 199 31 23 chrUextra 3198948 3199919 -25804737 - SAR_DM Satellite Satellite -435 1037 59 7 609 8290 20 45 2 chrUextra 3200019 3200990 -25803666 - R1_DM LINE R1 -1160 4196 3184 7 609 5885 14 35 1 chrUextra 3201090 3201784 -25802872 - PROTOP_A DNA P -388 717 1 7 609 3792 32 0 0 chrUextra 3202161 3202597 -25802059 + R1_DM LINE R1 1344 1779 -3577 7 609 3361 30 114 0 chrUextra 3202597 3203132 -25801524 + R1_DM LINE R1 1974 2569 -2787 7 609 4256 11 2 2 chrUextra 3203232 3203707 -25800949 + DM412B_LTR LTR Gypsy 97 571 0 7 609 4516 10 0 0 chrUextra 3203707 3204203 -25800453 + DM176_I LTR Gypsy 672 1167 -5253 7 609 757 152 12 0 chrUextra 3204735 3204906 -25799750 + (AATAG)n Simple_repeat Simple_repeat 2 174 0 7 609 4121 195 14 19 chrUextra 3205379 3206345 -25798311 - SAR_DM Satellite Satellite -255 1217 256 7 609 6769 33 0 0 chrUextra 3206447 3207233 -25797423 - FW_DM LINE Jockey -3906 786 1 7 609 1249 81 11 0 chrUextra 3207241 3207415 -25797241 - MDG1_I LTR Gypsy -1119 5477 5302 7 609 3828 31 9 0 chrUextra 3207515 3207962 -25796694 - FW_DM LINE Jockey -3921 771 321 7 609 4460 17 13 2 chrUextra 3207963 3208485 -25796171 - G_DM LINE Jockey 0 4346 3819 7 609 2704 93 21 13 chrUextra 3208586 3209555 -25795101 + DMSAT6 Satellite Satellite 1 975 -37 7 609 4840 26 14 123 chrUextra 3209656 3210389 -25794267 - CIRCE LINE Composite -723 5633 4981 7 609 3314 6 0 3 chrUextra 3210725 3211091 -25793565 + STALKER4_LTR LTR Gypsy 38 402 0 7 609 688 19 74 0 chrUextra 3211118 3211213 -25793443 + STALKER4_I LTR Gypsy 2229 2317 -4213 7 609 3717 41 2 0 chrUextra 3211231 3211695 -25792961 + STALKER4_I LTR Gypsy 3114 3578 -2952 7 609 1620 24 14 0 chrUextra 3212343 3212765 -25791891 + (GAGAA)n Simple_repeat Simple_repeat 1 427 0 7 609 608 245 113 52 chrUextra 3212877 3213239 -25791417 + M4DM DNA Transib 3 386 -1049 7 609 1254 98 122 5 chrUextra 3213630 3213835 -25790821 + DNAREP1_DM LINE Penelope 1 229 -365 7 609 3894 190 33 11 chrUextra 3213954 3214905 -25789751 + SAR_DM Satellite Satellite 57 1028 -444 7 609 8619 10 9 0 chrUextra 3215005 3215975 -25788681 - DM176_I LTR Gypsy -2117 4303 3325 7 609 738 184 0 22 chrUextra 3216621 3216760 -25787896 - DMCR1A LINE CR1 -1848 2622 2487 7 609 947 222 374 0 chrUextra 3216765 3217045 -25787611 - DMCR1A LINE CR1 -2445 2025 1641 7 609 3819 193 24 29 chrUextra 3217145 3218115 -25786541 + SAR_DM Satellite Satellite 1 965 -208 7 609 3984 201 14 21 chrUextra 3218215 3219175 -25785481 + SAR_DM Satellite Satellite 1 953 -203 7 609 5049 59 112 0 chrUextra 3219285 3220255 -25784401 + STALKER4_I LTR Gypsy 1165 2242 -4288 7 609 3372 5 5 10 chrUextra 3220355 3220739 -25783917 - G2_DM LINE Jockey -1522 1580 1199 7 609 5581 5 0 0 chrUextra 3220725 3221325 -25783331 - G2_DM LINE Jockey -2340 762 163 7 609 8512 17 13 5 chrUextra 3221425 3222395 -25782261 - Gypsy4_I LTR Gypsy -3588 2700 1723 7 609 6935 58 5 29 chrUextra 3222496 3223465 -25781191 + Gypsy10_I LTR Gypsy 2402 3347 -1931 7 609 6570 62 2 19 chrUextra 3223565 3224485 -25780171 - R1_DM LINE R1 -4451 905 1 7 609 3538 196 18 20 chrUextra 3224641 3225605 -25779051 - SAR_DM Satellite Satellite -208 1264 303 7 609 2587 49 149 0 chrUextra 3225705 3226234 -25778422 - IDEFIX_I LTR Gypsy -3645 1983 1376 7 609 3150 64 9 0 chrUextra 3226234 3226674 -25777982 - IDEFIX_I LTR Gypsy -4567 1061 618 7 609 951 296 65 106 chrUextra 3228932 3229804 -25774852 - Invader3_I LTR Gypsy -1309 3579 2743 7 609 3693 175 15 20 chrUextra 3229987 3230955 -25773701 + SAR_DM Satellite Satellite 1 963 -208 7 609 3368 0 8 0 chrUextra 3231055 3231453 -25773203 + TART LINE telomeric 10263 10663 -3814 7 609 2886 122 94 34 chrUextra 3231441 3232025 -25772631 + TART LINE telomeric 9665 10283 -4194 7 609 21 0 0 0 chrUextra 3232638 3232659 -25771997 + AT_rich Low_complexity Low_complexity 1 21 0 7 609 770 52 0 108 chrUextra 3232965 3233095 -25771561 - Baggins1 LINE LOA 0 5453 5338 7 609 3248 25 5 0 chrUextra 3233195 3233596 -25771060 - PROTOP_A DNA P -702 403 1 7 609 3704 56 4 7 chrUextra 3233596 3234158 -25770498 - PROTOP_A DNA P -31 1074 570 7 609 3480 184 14 19 chrUextra 3234265 3235234 -25769422 + SAR_DM Satellite Satellite 1 963 -227 7 609 189 147 0 0 chrUextra 3235975 3236009 -25768647 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 7 609 1512 11 0 0 chrUextra 3236751 3236925 -25767731 + (TCTTG)n Simple_repeat Simple_repeat 3 176 0 7 609 807 10 10 0 chrUextra 3237474 3237574 -25767082 + NTS_DM Other Other 33 133 -107 7 609 817 0 0 0 chrUextra 3237574 3237670 -25766986 + NTS_DM Other Other 38 133 -107 7 609 1408 20 20 20 chrUextra 3237670 3237873 -25766783 + NTS_DM Other Other 38 240 0 7 609 1720 25 17 17 chrUextra 3237873 3238113 -25766543 + NTS_DM Other Other 1 240 0 7 609 1713 25 17 17 chrUextra 3238113 3238353 -25766303 + NTS_DM Other Other 1 240 0 7 609 774 11 0 0 chrUextra 3238353 3238443 -25766213 + NTS_DM Other Other 1 90 -150 7 609 3128 56 9 0 chrUextra 3238543 3238969 -25765687 - HETA LINE telomeric -1812 4269 3840 7 609 398 0 0 0 chrUextra 3238976 3239032 -25765624 - TART LINE telomeric 0 14477 14422 7 609 3284 80 12 6 chrUextra 3239032 3239512 -25765144 - TART LINE telomeric -3814 10663 10181 7 609 8039 25 0 0 chrUextra 3239612 3240581 -25764075 - DMCR1A LINE CR1 -1956 2514 1546 7 609 4688 23 2 0 chrUextra 3240681 3241251 -25763405 - R1_DM LINE R1 -3108 2248 1678 7 609 1502 40 62 13 chrUextra 3241248 3241475 -25763181 - R1_DM LINE R1 -4389 967 730 7 609 4202 150 3 30 chrUextra 3241457 3242089 -25762567 - R1_DM LINE R1 -4741 615 1 7 609 455 36 0 0 chrUextra 3242089 3242144 -25762512 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 7 609 4022 11 79 0 chrUextra 3242150 3242719 -25761937 - R2_DM LINE R2 0 3607 2994 7 609 901 239 10 0 chrUextra 3242826 3243115 -25761541 + QUASIMODO_I LTR Gypsy 5544 5835 -225 7 609 1874 110 62 63 chrUextra 3243291 3243758 -25760898 + QUASIMODO_LTR LTR Gypsy 1 589 -69 7 609 680 115 0 0 chrUextra 3243888 3244001 -25760655 - ARS406_DM Unknown Unknown -240 113 1 7 609 3668 190 13 17 chrUextra 3243908 3244838 -25759818 + SAR_DM Satellite Satellite 195 1120 -352 7 609 391 184 9 19 chrUextra 3244752 3244857 -25759799 - XDMR_DM Unknown Unknown 0 360 257 7 609 540 229 0 0 chrUextra 3244957 3245079 -25759577 + Gypsy_I LTR Gypsy 6098 6219 -288 7 609 1139 208 47 47 chrUextra 3245081 3245485 -25759171 + Gypsy_LTR LTR Gypsy 33 436 -46 7 609 229 220 0 0 chrUextra 3245638 3245697 -25758959 + TIRANT_I LTR Gypsy 6974 7032 -660 7 609 3281 207 26 18 chrUextra 3246026 3246990 -25757666 - SAR_DM Satellite Satellite -702 971 1 7 609 322 178 50 101 chrUextra 3247363 3247482 -25757174 + Copia_I LTR Copia 4401 4513 -80 7 609 34 24 0 0 chrUextra 3248000 3248041 -25756615 + AT_rich Low_complexity Low_complexity 1 41 0 7 609 1593 64 95 41 chrUextra 3248164 3248459 -25756197 + DM176_LTR LTR Gypsy 171 481 -26 7 609 1453 126 129 59 chrUextra 3248493 3248880 -25755776 + DM297_LTR LTR Gypsy 1 414 0 7 609 420 170 69 10 chrUextra 3248904 3249005 -25755651 + Gypsy2_LTR LTR Gypsy 100 206 -147 7 609 1158 122 0 0 chrUextra 3249234 3249592 -25755064 + (TA)n Simple_repeat Simple_repeat 1 358 0 7 609 2313 76 32 20 chrUextra 3249596 3250012 -25754644 - Gypsy6A_LTR LTR Gypsy 0 420 1 7 609 1573 16 5 0 chrUextra 3250014 3250201 -25754455 - Gypsy6_I LTR Gypsy 0 7012 6825 7 609 542 67 100 0 chrUextra 3250329 3250419 -25754237 + MAX_I LTR Pao 1256 1354 -6560 7 609 5830 53 48 23 chrUextra 3250405 3251271 -25753385 + MAX_I LTR Pao 1219 2106 -5808 7 609 3775 176 18 26 chrUextra 3251372 3252340 -25752316 - SAR_DM Satellite Satellite -311 1161 202 7 609 4158 21 0 4 chrUextra 3252440 3252965 -25751691 + TART LINE telomeric 13955 14477 0 7 609 1909 167 11 23 chrUextra 3252967 3253409 -25751247 + TAHRE LINE telomeric 220 656 -9807 7 609 5086 10 2 2 chrUextra 3253509 3254115 -25750541 + QUASIMODO_LTR LTR Gypsy 53 658 0 7 609 1279 110 56 99 chrUextra 3254128 3254450 -25750206 - ACCORD2_I LTR Gypsy -5342 1870 1563 7 609 7775 25 20 2 chrUextra 3254578 3255547 -25749109 - R1_DM LINE R1 -91 5265 4280 7 609 2401 102 30 8 chrUextra 3255647 3256606 -25748050 + DMSAT6 Satellite Satellite 1 979 -6 7 609 4051 242 14 1 chrUextra 3256719 3257676 -25746980 - Gypsy6_I LTR Gypsy -2423 4589 3621 7 609 6430 110 21 0 chrUextra 3257785 3258754 -25745902 - Gypsy12_I LTR Gypsy -2023 3523 2535 7 609 612 0 0 0 chrUextra 3258854 3258924 -25745732 + DM176_I LTR Gypsy 6351 6420 0 7 609 4241 12 0 0 chrUextra 3258924 3259431 -25745225 + DM176_LTR LTR Gypsy 1 507 0 7 609 28 48 0 0 chrUextra 3259703 3259745 -25744911 + AT_rich Low_complexity Low_complexity 1 42 0 7 609 3572 2 0 7 chrUextra 3259923 3260351 -25744305 + BATUMI_I LTR Pao 7539 7963 0 7 609 2198 28 0 27 chrUextra 3260351 3260642 -25744014 + BATUMI_I LTR Pao 7002 7284 -679 7 609 1954 28 28 0 chrUextra 3260640 3260892 -25743764 - PROTOP DNA P -2431 2049 1791 7 609 3729 209 17 26 chrUextra 3260992 3261960 -25742696 - SAR_DM Satellite Satellite -1087 958 1 7 609 1067 303 38 39 chrUextra 3262061 3263021 -25741635 + SAR_DM Satellite Satellite 297 1255 -217 7 609 8110 5 16 1 chrUextra 3263130 3264099 -25740557 - IDEFIX_I LTR Gypsy -3594 2034 1051 7 609 1001 30 15 0 chrUextra 3264308 3264440 -25740216 - MAX_LTR LTR Pao -187 134 1 7 609 4291 45 8 50 chrUextra 3264445 3265167 -25739489 - MAX_I LTR Pao -2 7912 6837 7 609 812 329 19 10 chrUextra 3265267 3265685 -25738971 + Gypsy3_I LTR Gypsy 1108 1529 -4648 7 609 488 253 111 50 chrUextra 3265798 3266160 -25738496 + M4DM DNA Transib 3 386 -1049 7 609 1632 23 14 0 chrUextra 3267080 3267301 -25737355 + TC1-2_DM DNA Tc1 1313 1536 -108 7 609 3258 92 2 26 chrUextra 3267403 3267905 -25736751 - Gypsy12_I LTR Gypsy -4222 1324 835 7 609 2846 93 4 26 chrUextra 3267910 3268371 -25736285 - Gypsy12_I LTR Gypsy -4991 555 105 7 609 3451 0 0 0 chrUextra 3268471 3268862 -25735794 - TABOR_LTR LTR Gypsy -115 391 1 7 609 2158 178 36 19 chrUextra 3268860 3269439 -25735217 - TABOR_I LTR Gypsy 0 6336 5748 7 609 4265 0 2 0 chrUextra 3269539 3270031 -25734625 + NOMAD_LTR LTR Gypsy 26 518 0 7 609 227 0 0 0 chrUextra 3270031 3270057 -25734599 + NOMAD_LTR LTR Gypsy 493 518 0 7 609 3910 0 2 0 chrUextra 3270057 3270507 -25734149 + NOMAD_I LTR Gypsy 1 451 -6121 7 609 1725 156 11 31 chrUextra 3270607 3270957 -25733699 - DMCR1A LINE CR1 -2190 2280 1938 7 609 359 77 19 0 chrUextra 3270972 3271024 -25733632 + DOC4_DM LINE Jockey 2494 2546 -245 7 609 5464 79 36 87 chrUextra 3272743 3273711 -25730945 + CIRCE LINE Composite 3628 4546 -1810 7 609 7621 41 6 0 chrUextra 3274879 3275847 -25728809 - R1_DM LINE R1 -2039 3317 2344 7 609 21 36 0 0 chrUextra 3276618 3276646 -25728010 + AT_rich Low_complexity Low_complexity 1 28 0 7 610 7693 31 4 0 chrUextra 3278083 3279051 -25725605 + NINJA_I LTR Pao 1064 2035 -3976 7 610 1125 22 0 0 chrUextra 3279151 3279289 -25725367 - NTS_DM Other Other -102 138 1 7 610 1492 10 20 15 chrUextra 3279289 3279491 -25725165 - NTS_DM Other Other 0 240 38 7 610 870 9 0 27 chrUextra 3279491 3279603 -25725053 - NTS_DM Other Other -107 133 25 7 610 22 56 0 0 chrUextra 3279629 3279665 -25724991 + AT_rich Low_complexity Low_complexity 1 36 0 7 610 261 125 0 0 chrUextra 3279678 3279718 -25724938 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 610 246 150 0 0 chrUextra 3279770 3279810 -25724846 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 610 27 29 0 0 chrUextra 3279815 3279849 -25724807 + AT_rich Low_complexity Low_complexity 1 34 0 7 610 22 56 0 0 chrUextra 3279913 3279949 -25724707 + AT_rich Low_complexity Low_complexity 1 36 0 7 610 861 0 0 0 chrUextra 3280021 3280119 -25724537 - LSU-rRNA_Dme rRNA rRNA 0 3900 3803 7 610 3290 5 0 0 chrUextra 3280800 3281187 -25723469 + FW_DM LINE Jockey 887 1273 -3419 7 610 3801 181 16 22 chrUextra 3281294 3282255 -25722401 - SAR_DM Satellite Satellite -396 955 1 7 610 257 30 0 0 chrUextra 3282355 3282388 -25722268 + Invader2_I LTR Gypsy 4560 4592 0 7 610 1922 8 85 4 chrUextra 3282388 3282634 -25722022 + Invader2_LTR LTR Gypsy 1 266 0 7 610 1028 88 0 0 chrUextra 3282634 3282793 -25721863 + STALKER4_I LTR Gypsy 3300 3458 -3072 7 610 236 57 0 0 chrUextra 3282794 3282829 -25721827 + IDEFIX_I LTR Gypsy 437 471 -5157 7 610 3051 77 7 0 chrUextra 3282825 3283266 -25721390 + IDEFIX_I LTR Gypsy 657 1100 -4528 7 610 473 33 0 16 chrUextra 3283261 3283323 -25721333 + IDEFIX_I LTR Gypsy 1377 1437 -4191 7 610 7890 27 5 0 chrUextra 3283423 3284391 -25720265 - MAX_I LTR Pao -5528 2386 1414 7 610 1107 203 4 4 chrUextra 3284491 3284763 -25719893 - SAR_DM Satellite Satellite -705 767 496 7 610 1714 192 2 7 chrUextra 3284778 3285188 -25719468 - SAR_DM Satellite Satellite -569 903 496 7 610 777 31 0 0 chrUextra 3285193 3285291 -25719365 + ARS406_DM Unknown Unknown 90 187 -166 7 610 1126 159 12 16 chrUextra 3285203 3285458 -25719198 - SAR_DM Satellite Satellite -569 903 650 7 610 1637 119 76 16 chrUextra 3285558 3285874 -25718782 - Gypsy6_LTR LTR Gypsy -72 335 1 7 610 5522 0 0 0 chrUextra 3285874 3286525 -25718131 + TABOR_I LTR Gypsy 1012 1662 -4674 7 610 5506 3 152 101 chrUextra 3286625 3287592 -25717064 + ROVER-I_DM LTR Gypsy 23 1038 -5546 7 610 2318 121 17 34 chrUextra 3287697 3288659 -25715997 - DMSAT6 Satellite Satellite -6 944 1 7 610 3781 13 0 0 chrUextra 3288759 3289209 -25715447 - PROTOP_A DNA P -655 450 1 7 610 799 152 197 0 chrUextra 3289228 3289406 -25715250 - Gypsy8_I LTR Gypsy -3905 442 230 7 610 246 200 0 18 chrUextra 3289609 3289665 -25714991 - Gypsy8_LTR LTR Gypsy -248 56 2 7 610 1281 172 260 43 chrUextra 3289828 3290339 -25714317 + TART LINE telomeric 9858 10479 -3998 7 610 34 24 0 0 chrUextra 3290358 3290399 -25714257 + AT_rich Low_complexity Low_complexity 1 41 0 7 610 1620 20 0 0 chrUextra 3291126 3291429 -25713227 + (CAAAA)n Simple_repeat Simple_repeat 1 303 0 7 610 5736 26 40 0 chrUextra 3291960 3292927 -25711729 - R1_DM LINE R1 -2401 2955 1916 7 610 3983 42 62 1 chrUextra 3293232 3293993 -25710663 + PROTOP DNA P 148 823 -282 7 610 3471 188 35 19 chrUextra 3294114 3295039 -25709617 + SAR_DM Satellite Satellite 326 1264 -208 7 610 773 71 0 0 chrUextra 3294942 3295054 -25709602 - ARS406_DM Unknown Unknown -164 189 78 7 610 4493 4 0 0 chrUextra 3295163 3295681 -25708975 + NOMAD_LTR LTR Gypsy 1 518 0 7 610 257 293 13 7 chrUextra 3296232 3296383 -25708273 - XDMR Unknown Unknown -209 152 1 7 610 1096 302 30 37 chrUextra 3296283 3297155 -25707501 + SAR_DM Satellite Satellite 256 1121 -351 7 610 353 135 33 33 chrUextra 3297079 3297171 -25707485 - XDMR_DM Unknown Unknown -10 350 259 7 610 1483 0 6 0 chrUextra 3297295 3297471 -25707185 + QUASIMODO_LTR LTR Gypsy 237 413 -245 7 610 1035 57 12 71 chrUextra 3297588 3297757 -25706899 - BLOOD_LTR LTR Gypsy -143 256 98 7 610 4247 12 0 0 chrUextra 3297754 3298262 -25706394 - BLOOD_I LTR Gypsy -1658 4955 4448 7 610 1914 103 111 40 chrUextra 3298362 3298787 -25705869 + BATUMI_I LTR Pao 133 587 -7376 7 610 3121 29 26 0 chrUextra 3298805 3299188 -25705468 - Invader6_LTR LTR Gypsy 0 393 1 7 610 779 0 0 0 chrUextra 3299188 3299278 -25705378 - Invader6_I LTR Gypsy 0 4099 4010 7 610 264 59 0 0 chrUextra 3299295 3299329 -25705327 + (T)n Simple_repeat Simple_repeat 1 34 0 7 610 3696 190 12 23 chrUextra 3299435 3300393 -25704263 + SAR_DM Satellite Satellite 212 1159 -313 7 610 7972 23 1 0 chrUextra 3300496 3301463 -25703193 - TAHRE LINE telomeric -5021 5442 4475 7 610 2387 90 24 21 chrUextra 3301564 3302530 -25702126 + DMSAT6 Satellite Satellite 1 968 -6 7 610 3282 212 27 13 chrUextra 3302631 3303587 -25701069 - SAR_DM Satellite Satellite -208 1264 295 7 610 1761 0 0 0 chrUextra 3303696 3303896 -25700760 - DIVER_I LTR Pao -5443 200 1 7 610 1927 5 0 0 chrUextra 3303917 3304141 -25700515 - DIVER_LTR LTR Pao 0 224 1 7 610 3335 22 0 26 chrUextra 3304141 3304562 -25700094 + CIRCE LINE Composite 1473 1882 -4474 7 610 1036 244 95 33 chrUextra 3304775 3305258 -25699398 - G_DM LINE Jockey -3516 830 318 7 610 2435 49 9 0 chrUextra 3305261 3305585 -25699071 + R2_DM LINE R2 2014 2340 -1267 7 610 1110 7 0 7 chrUextra 3305584 3305728 -25698928 - G2_DM LINE Jockey -14 3088 2946 7 610 1096 267 117 33 chrUextra 3305835 3306734 -25697922 + SAR_DM Satellite Satellite 252 1225 -247 7 610 7933 12 4 0 chrUextra 3306894 3307860 -25696796 + Invader2_I LTR Gypsy 875 1844 -2748 7 610 7789 32 0 0 chrUextra 3307960 3308926 -25695730 - R1_DM LINE R1 -1850 3506 2541 7 610 5053 2 0 0 chrUextra 3310092 3310670 -25693986 + LSU-rRNA_Dme rRNA rRNA 2074 2651 -1249 7 610 531 0 0 0 chrUextra 3310667 3310728 -25693928 + R1_DM LINE R1 5296 5356 0 7 610 2884 3 0 0 chrUextra 3310726 3311058 -25693598 + LSU-rRNA_Dme rRNA rRNA 2640 2971 -929 7 610 4706 16 61 26 chrUextra 3311158 3311780 -25692876 - ACCORD2_I LTR Gypsy -6568 644 1 7 610 1751 14 0 23 chrUextra 3311780 3312000 -25692656 - ACCORD2_LTR LTR Gypsy 0 215 1 7 610 1064 8 0 0 chrUextra 3312000 3312124 -25692532 - R1_DM LINE R1 -2937 2419 2296 7 610 1038 8 0 0 chrUextra 3312224 3312343 -25692313 - PROTOP_A DNA P -986 119 1 7 610 799 152 197 0 chrUextra 3312362 3312540 -25692116 - Gypsy8_I LTR Gypsy -3905 442 230 7 610 246 200 0 18 chrUextra 3312743 3312799 -25691857 - Gypsy8_LTR LTR Gypsy -248 56 2 7 610 864 248 42 11 chrUextra 3312808 3313093 -25691563 - BURDOCK_I LTR Gypsy -3412 2448 2155 7 610 21 0 0 0 chrUextra 3313152 3313173 -25691483 + AT_rich Low_complexity Low_complexity 1 21 0 7 610 815 0 0 0 chrUextra 3313290 3313386 -25691270 + ROO_I LTR Pao 8161 8256 0 7 610 3742 2 0 0 chrUextra 3313386 3313814 -25690842 + ROO_LTR LTR Pao 1 428 0 7 610 488 253 111 50 chrUextra 3313843 3314205 -25690451 + M4DM DNA Transib 3 386 -1049 7 610 5768 52 9 8 chrUextra 3314356 3315137 -25689519 + Jockey2 LINE Jockey 2647 3428 0 7 610 3054 179 8 10 chrUextra 3315431 3316141 -25688515 + SAR_DM Satellite Satellite 195 903 -569 7 610 1051 82 0 0 chrUextra 3316148 3316306 -25688350 - ARS406_DM Unknown Unknown -195 158 1 7 610 833 219 0 4 chrUextra 3316156 3316385 -25688271 + SAR_DM Satellite Satellite 496 723 -749 7 610 1535 277 34 32 chrUextra 3316491 3317363 -25687293 - ROVER-I_DM LTR Gypsy -5203 1381 508 7 610 1881 172 7 10 chrUextra 3317554 3317960 -25686696 + SAR_DM Satellite Satellite 643 1047 -425 7 610 203 54 81 0 chrUextra 3317960 3317997 -25686659 + (TAAAAA)n Simple_repeat Simple_repeat 4 43 0 7 610 2381 157 14 8 chrUextra 3318000 3318519 -25686137 + SAR_DM Satellite Satellite 326 847 -625 7 610 7054 48 17 3 chrUextra 3318620 3319586 -25685070 + STALKER4_I LTR Gypsy 2155 3133 -3397 7 610 6271 21 48 4 chrUextra 3319686 3320499 -25684157 - STALKER4_I LTR Gypsy -979 5551 4703 7 610 968 71 156 0 chrUextra 3320498 3320652 -25684004 - STALKER4_I LTR Gypsy -2732 3798 3621 7 610 3838 184 17 21 chrUextra 3320752 3321718 -25682938 + SAR_DM Satellite Satellite 256 1217 -255 7 610 3983 10 0 0 chrUextra 3321818 3322300 -25682356 + Invader2_I LTR Gypsy 2072 2553 -2039 7 610 4202 6 0 0 chrUextra 3322300 3322784 -25681872 - GTWIN_LTR LTR Gypsy 0 495 12 7 610 4011 53 30 80 chrUextra 3323950 3324649 -25680007 - PROTOP_A DNA P -441 664 1 7 610 4164 28 63 0 chrUextra 3325016 3325982 -25678674 + R1_DM LINE R1 1666 2692 -2664 7 610 3496 95 0 50 chrUextra 3326082 3326660 -25677996 - R1_DM LINE R1 -4234 1122 574 7 610 982 102 29 29 chrUextra 3326661 3326833 -25677823 - R1_DM LINE R1 -5184 172 1 7 610 1269 79 5 35 chrUextra 3326851 3327048 -25677608 + Gypsy6A_LTR LTR Gypsy 71 261 -159 7 610 640 193 7 14 chrUextra 3327174 3327316 -25677340 + HETRP_DM Satellite Satellite 1529 1669 -203 7 610 610 230 0 32 chrUextra 3327433 3327590 -25677066 + HETRP_DM Satellite Satellite 1518 1669 -203 7 610 606 193 7 15 chrUextra 3327728 3327865 -25676791 + HETRP_DM Satellite Satellite 1529 1664 -208 7 610 482 210 0 56 chrUextra 3327987 3328113 -25676543 + HETRP_DM Satellite Satellite 1518 1636 -236 7 610 345 317 32 32 chrUextra 3328337 3328614 -25676042 + Invader1_I LTR Gypsy 950 1226 -1960 7 610 940 296 16 16 chrUextra 3328762 3329139 -25675517 + MICROPIA_I LTR Gypsy 1360 1736 -2740 7 610 4755 4 0 2 chrUextra 3329278 3329827 -25674829 - R2_DM LINE R2 -3057 550 3 7 610 3607 2 0 0 chrUextra 3329827 3330243 -25674413 - LSU-rRNA_Dme rRNA rRNA -1336 2564 2149 7 610 1801 13 17 13 chrUextra 3330383 3330622 -25674034 + NTS_DM Other Other 1 240 0 7 610 1839 4 17 13 chrUextra 3330622 3330861 -25673795 + NTS_DM Other Other 1 240 0 7 610 1836 4 17 13 chrUextra 3330861 3331100 -25673556 + NTS_DM Other Other 1 240 0 7 610 1626 29 0 0 chrUextra 3331100 3331306 -25673350 + NTS_DM Other Other 1 206 -34 7 610 5123 14 20 0 chrUextra 3331408 3332041 -25672615 - LSU-rRNA_Dme rRNA rRNA -2808 1092 447 7 610 1090 56 0 0 chrUextra 3332046 3332190 -25672466 - LSU-rRNA_Dme rRNA rRNA -3755 145 2 7 610 28 79 0 0 chrUextra 3332203 3332266 -25672390 + AT_rich Low_complexity Low_complexity 1 63 0 7 610 4587 45 20 5 chrUextra 3332490 3333093 -25671563 - G2_DM LINE Jockey -1090 2012 1401 7 610 302 83 21 0 chrUextra 3333095 3333143 -25671513 - NTS_DM Other Other -191 49 1 7 610 1015 154 29 21 chrUextra 3333143 3333381 -25671275 - NTS_DM Other Other 0 240 1 7 610 4065 69 44 105 chrUextra 3333544 3334383 -25670273 + MAX_I LTR Pao 410 1197 -6717 7 610 25 0 0 0 chrUextra 3334389 3334414 -25670242 + AT_rich Low_complexity Low_complexity 1 25 0 7 610 1684 44 4 17 chrUextra 3334603 3334835 -25669821 + R1_DM LINE R1 2009 2237 -3119 7 610 611 42 221 0 chrUextra 3334917 3335012 -25669644 - Gypsy6A_LTR LTR Gypsy -234 186 71 7 610 2701 109 84 67 chrUextra 3335030 3335568 -25669088 + R1_DM LINE R1 1 547 -4809 7 610 5271 28 1 0 chrUextra 3335668 3336323 -25668333 + QUASIMODO_I LTR Gypsy 428 1083 -4977 7 610 2668 6 0 0 chrUextra 3336316 3336633 -25668023 + QUASIMODO_I LTR Gypsy 1964 2280 -3780 7 610 7785 20 10 1 chrUextra 3336733 3337698 -25666958 - PROTOP DNA P -2700 1780 807 7 610 26 50 0 0 chrUextra 3337900 3337940 -25666716 + AT_rich Low_complexity Low_complexity 1 40 0 7 610 403 235 53 83 chrUextra 3338103 3338368 -25666288 + Gypsy3_LTR LTR Gypsy 112 368 -30 7 610 4757 2 0 0 chrUextra 3338863 3339403 -25665253 - LINEJ1_DM LINE Jockey -889 4131 3592 7 610 2145 87 0 15 chrUextra 3339966 3340322 -25664334 - QUASIMODO_LTR LTR Gypsy -292 366 52 7 610 3856 13 0 61 chrUextra 3340347 3340854 -25663802 + MICROPIA_LTR LTR Gypsy 1 476 0 7 610 342 0 0 0 chrUextra 3340854 3340893 -25663763 + MICROPIA_I LTR Gypsy 1 39 -4437 7 610 7833 4 20 0 chrUextra 3340995 3341958 -25662698 + QUASIMODO_I LTR Gypsy 3689 4670 -1390 7 610 6445 70 84 1 chrUextra 3342058 3343015 -25661641 - R1-2_DM LINE R1 -2127 1089 54 7 610 496 0 0 16 chrUextra 3343123 3343184 -25661472 - QUASIMODO_I LTR Gypsy -5999 61 2 7 610 5498 11 0 3 chrUextra 3343186 3343846 -25660810 - QUASIMODO_LTR LTR Gypsy 0 658 1 7 610 335 89 0 0 chrUextra 3343846 3343901 -25660755 - PROTOP_A DNA P -401 704 650 7 610 1260 34 284 0 chrUextra 3343898 3344088 -25660568 - PROTOP DNA P -3069 1411 1168 7 610 3644 173 21 29 chrUextra 3344195 3345135 -25659521 - SAR_DM Satellite Satellite -216 1256 324 7 610 1420 315 16 16 chrUextra 3345464 3346140 -25658516 - Copia2_I LTR Copia -2071 2091 1407 7 610 3653 190 9 15 chrUextra 3346319 3347283 -25657373 + SAR_DM Satellite Satellite 1 958 -208 7 610 8277 10 1 0 chrUextra 3347383 3348347 -25656309 - Invader1_I LTR Gypsy -1568 1618 654 7 610 249 278 22 11 chrUextra 3349126 3349217 -25655439 - Invader4_I LTR Gypsy -539 1874 1783 7 610 8247 1 2 2 chrUextra 3349511 3350475 -25654181 - LSU-rRNA_Dme rRNA rRNA -2307 1593 630 7 610 3630 183 36 13 chrUextra 3350575 3351534 -25653122 + SAR_DM Satellite Satellite 1 980 -219 7 610 4441 13 0 0 chrUextra 3351639 3352167 -25652489 + Invader1_I LTR Gypsy 2552 3079 -107 7 610 460 0 0 0 chrUextra 3352179 3352233 -25652423 + Invader1_I LTR Gypsy 3133 3186 0 7 610 3160 8 3 0 chrUextra 3352233 3352602 -25652054 + Invader1_LTR LTR Gypsy 1 370 -53 7 610 4624 2 0 0 chrUextra 3352703 3353236 -25651420 + NOMAD_I LTR Gypsy 2702 3234 -3338 7 610 3873 0 0 0 chrUextra 3353228 3353667 -25650989 + NOMAD_I LTR Gypsy 3980 4418 -2154 7 610 2813 126 57 133 chrUextra 3353767 3354731 -25649925 + BATUMI_I LTR Pao 98 988 -6975 7 610 2231 32 4 0 chrUextra 3354831 3355109 -25649547 + Gypsy4_LTR LTR Gypsy 9 287 0 7 610 4665 27 73 28 chrUextra 3355109 3355793 -25648863 + Gypsy4_I LTR Gypsy 1 715 -5573 7 610 8470 0 0 0 chrUextra 3355895 3356859 -25647797 - GTWIN_I LTR Gypsy -630 5791 4828 7 610 4948 19 72 0 chrUextra 3356959 3357923 -25646733 - DOC2_DM LINE Jockey -765 4028 2996 7 610 7873 0 2 0 chrUextra 3358023 3358987 -25645669 + TRANSPAC_I LTR Gypsy 2917 3882 -708 7 610 7691 11 3 0 chrUextra 3359087 3360051 -25644605 + QUASIMODO_I LTR Gypsy 4157 5123 -937 7 610 1915 255 62 30 chrUextra 3360162 3361072 -25643584 - ROVER-I_DM LTR Gypsy -5098 1486 548 7 610 1648 194 24 5 chrUextra 3361215 3361625 -25643031 - SAR_DM Satellite Satellite -525 947 530 7 610 261 143 109 16 chrUextra 3361598 3361662 -25642994 + XDMR Unknown Unknown 292 361 0 7 610 2147 180 25 8 chrUextra 3361658 3362179 -25642477 - SAR_DM Satellite Satellite -396 1076 547 7 610 2219 94 7 39 chrUextra 3362291 3363241 -25641415 + DMSAT6 Satellite Satellite 1 919 -82 7 610 3395 192 21 23 chrUextra 3363345 3364306 -25640350 + SAR_DM Satellite Satellite 1 959 -242 7 610 3601 189 12 16 chrUextra 3364407 3365370 -25639286 - SAR_DM Satellite Satellite -442 959 1 7 610 3268 203 11 19 chrUextra 3365471 3366432 -25638224 + SAR_DM Satellite Satellite 1 953 -242 7 610 1749 98 104 25 chrUextra 3366540 3366866 -25637790 - BATUMI_I LTR Pao -7611 352 1 7 610 1998 35 3 34 chrUextra 3366866 3367160 -25637496 - BATUMI_I LTR Pao -679 7284 7000 7 610 1496 179 9 6 chrUextra 3367158 3367495 -25637161 - SAR_DM Satellite Satellite -736 736 399 7 610 2633 50 6 0 chrUextra 3367601 3367943 -25636713 + STALKER4_LTR LTR Gypsy 36 379 -23 7 610 27 49 0 0 chrUextra 3368081 3368122 -25636534 + AT_rich Low_complexity Low_complexity 1 41 0 7 610 725 206 6 6 chrUextra 3368153 3368324 -25636332 + Stalker2_I LTR Gypsy 291 461 -6941 7 610 952 112 19 0 chrUextra 3368323 3368483 -25636173 + STALKER4_I LTR Gypsy 742 904 -5626 7 610 978 9 0 0 chrUextra 3368663 3368778 -25635878 - Gypsy_I LTR Gypsy -6392 115 1 7 610 3958 23 4 2 chrUextra 3368776 3369257 -25635399 - Gypsy_LTR LTR Gypsy 0 482 1 7 610 1746 40 0 0 chrUextra 3369257 3369479 -25635177 + DM1731_LTR LTR Copia 114 335 -1 7 610 1184 14 14 0 chrUextra 3369479 3369627 -25635029 + DM1731_I LTR Copia 1 150 -3826 7 610 681 19 0 27 chrUextra 3369727 3369838 -25634818 + TART LINE telomeric 14370 14477 0 7 610 2946 13 0 8 chrUextra 3369838 3370218 -25634438 + TART LINE telomeric 14101 14477 0 7 610 3991 2 0 2 chrUextra 3370218 3370691 -25633965 + TART LINE telomeric 11786 12257 -2220 7 610 607 0 0 0 chrUextra 3370791 3370864 -25633792 + ROO_LTR LTR Pao 356 428 0 7 610 371 116 87 0 chrUextra 3370864 3370927 -25633729 - ROVER-LTR_DM LTR Gypsy -298 69 1 7 610 589 116 0 0 chrUextra 3370930 3371025 -25633631 + STALKER4_LTR LTR Gypsy 271 365 -37 7 610 471 113 43 114 chrUextra 3371855 3371995 -25632661 - Gypsy12_I LTR Gypsy -5390 156 27 7 610 1635 201 15 20 chrUextra 3371965 3372365 -25632291 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 610 2467 66 178 7 chrUextra 3372364 3372819 -25631837 - Gypsy12_I LTR Gypsy 0 5546 5014 7 610 1301 167 176 8 chrUextra 3372920 3373277 -25631379 - HETA LINE telomeric -1632 4449 4128 7 610 22 56 0 0 chrUextra 3373431 3373467 -25631189 + AT_rich Low_complexity Low_complexity 1 36 0 7 610 354 191 75 19 chrUextra 3373512 3373619 -25631037 + Copia_I LTR Copia 4401 4513 -80 7 610 3078 69 122 4 chrUextra 3373983 3374517 -25630139 - BATUMI_I LTR Pao -23 7940 7344 7 610 3136 42 9 14 chrUextra 3374512 3374947 -25629709 + BATUMI_I LTR Pao 6471 6903 -1060 7 610 1504 11 0 6 chrUextra 3375047 3375226 -25629430 + R1_DM LINE R1 5179 5356 0 7 610 1265 14 0 0 chrUextra 3375224 3375372 -25629284 + LSU-rRNA_Dme rRNA rRNA 2640 2787 -1113 7 610 5125 11 57 0 chrUextra 3375381 3376011 -25628645 + R2_DM LINE R2 374 1039 -2568 7 610 3107 97 12 29 chrUextra 3376114 3376632 -25628024 - Gypsy12_I LTR Gypsy -4991 555 47 7 610 1631 192 20 25 chrUextra 3376629 3377029 -25627627 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 610 330 43 0 0 chrUextra 3377028 3377074 -25627582 - Gypsy12_I LTR Gypsy 0 5546 5501 7 610 1750 0 0 5 chrUextra 3377174 3377381 -25627275 + ACCORD_LTR LTR Gypsy 353 558 0 7 610 3557 60 43 0 chrUextra 3378350 3378948 -25625708 + PROTOP_A DNA P 573 1105 0 7 610 4538 105 57 28 chrUextra 3379300 3380263 -25624393 + STALKER4_I LTR Gypsy 408 1447 -5083 7 610 916 185 32 12 chrUextra 3380367 3380613 -25624043 + SAR_DM Satellite Satellite 539 789 -683 7 610 1035 168 28 12 chrUextra 3380624 3380871 -25623785 + SAR_DM Satellite Satellite 539 789 -683 7 610 1074 178 18 7 chrUextra 3380882 3381323 -25623333 + SAR_DM Satellite Satellite 1 446 -678 7 610 730 12 0 0 chrUextra 3382489 3382575 -25622081 + DIVER_I LTR Pao 5558 5643 0 7 610 1927 5 0 0 chrUextra 3382575 3382799 -25621857 + DIVER_LTR LTR Pao 1 224 0 7 610 404 39 0 0 chrUextra 3382819 3382870 -25621786 - CIRCE LINE Composite -4878 1478 1428 7 610 641 92 20 10 chrUextra 3382870 3382969 -25621687 + STALKER4_LTR LTR Gypsy 280 379 -23 7 610 25 0 0 0 chrUextra 3383083 3383108 -25621548 + AT_rich Low_complexity Low_complexity 1 25 0 7 610 1547 187 0 0 chrUextra 3383136 3383452 -25621204 + STALKER4_I LTR Gypsy 235 550 -5980 7 610 1144 44 0 0 chrUextra 3383582 3383741 -25620915 - G2_DM LINE Jockey -10 3092 2934 7 610 2181 80 40 0 chrUextra 3383737 3384064 -25620592 + G2_DM LINE Jockey 2527 2866 -236 7 610 3476 31 70 0 chrUextra 3384059 3384515 -25620141 + G2_DM LINE Jockey 1551 2038 -1064 7 610 2341 88 335 12 chrUextra 3384615 3385458 -25619198 + R1-2_DM LINE R1 32 1147 -2069 7 610 558 171 28 9 chrUextra 3385460 3385566 -25619090 + R1-2_DM LINE R1 2205 2312 -904 7 610 3061 3 3 3 chrUextra 3385678 3386047 -25618609 + DM297_I LTR Gypsy 286 654 -5513 7 610 5053 5 0 0 chrUextra 3386037 3386641 -25618015 + DM297_I LTR Gypsy 4942 5545 -622 7 610 2244 0 4 0 chrUextra 3386741 3387007 -25617649 - Copia_I LTR Copia -4326 267 1 7 610 2200 7 4 4 chrUextra 3387007 3387283 -25617373 - Copia_LTR LTR Copia 0 276 1 7 610 2483 41 3 0 chrUextra 3387369 3387685 -25616971 - PROTOP DNA P 0 4480 4164 7 610 3539 181 25 19 chrUextra 3387814 3388753 -25615903 - SAR_DM Satellite Satellite -872 944 1 7 610 7518 3 19 26 chrUextra 3388867 3389830 -25614826 + ROVER-I_DM LTR Gypsy 473 1428 -5156 7 610 4582 2 0 0 chrUextra 3389930 3390455 -25614201 - LSU-rRNA_Dme rRNA rRNA -1588 2312 1788 7 610 3266 0 10 2 chrUextra 3390499 3390893 -25613763 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1392 7 610 1056 0 0 8 chrUextra 3390993 3391122 -25613534 + R1_DM LINE R1 4939 5066 -290 7 610 916 44 0 0 chrUextra 3391119 3391233 -25613423 + R1_DM LINE R1 5243 5356 0 7 610 4549 67 3 3 chrUextra 3391267 3391884 -25612772 + R1_DM LINE R1 1 617 -4739 7 610 530 28 14 14 chrUextra 3391883 3391956 -25612700 + R1_DM LINE R1 1101 1173 -4183 7 610 4319 198 42 8 chrUextra 3392056 3393019 -25611637 + HETA LINE telomeric 686 1680 -4401 7 610 853 67 0 0 chrUextra 3393123 3393242 -25611414 + TART LINE telomeric 10545 10663 -3814 7 610 4054 57 0 30 chrUextra 3393241 3393839 -25610817 + TART LINE telomeric 630 1209 -13268 7 610 1716 34 49 33 chrUextra 3393839 3394082 -25610574 + PROTOP_A DNA P 1 247 -858 7 610 2353 48 3 0 chrUextra 3394182 3394498 -25610158 + DOC3_DM LINE Jockey 1474 1790 -2950 7 610 3486 32 7 0 chrUextra 3394714 3395145 -25609511 + DMRT1B LINE R1 1 434 -4749 7 610 676 259 21 55 chrUextra 3395912 3396149 -25608507 - Invader1_I LTR Gypsy -583 2751 2356 7 610 3828 16 14 8 chrUextra 3396308 3396828 -25607828 + Stalker2_I LTR Gypsy 626 1148 -6254 7 610 1777 5 0 0 chrUextra 3397053 3397271 -25607385 + Stalker2_I LTR Gypsy 1132 1349 -6053 7 610 4208 238 0 0 chrUextra 3397371 3398334 -25606322 - Gypsy6_I LTR Gypsy -3304 3708 2746 7 610 1909 92 103 2 chrUextra 3398434 3398901 -25605755 - S_DM DNA Tc1 -1222 514 1 7 610 441 177 0 30 chrUextra 3398985 3399084 -25605572 - DNAREP1_DM LINE Penelope -236 358 263 7 610 400 145 0 0 chrUextra 3399310 3399379 -25605277 - DNAREP1_DM LINE Penelope -349 245 177 7 610 458 225 18 128 chrUextra 3399500 3399719 -25604937 + TIRANT_LTR LTR Gypsy 115 309 -108 7 610 1879 79 4 0 chrUextra 3400040 3400305 -25604351 + Baggins1 LINE LOA 4762 5027 -426 7 610 359 305 70 29 chrUextra 3400576 3400920 -25603736 - QUASIMODO_I LTR Gypsy -5320 740 383 7 610 22 0 0 0 chrUextra 3401208 3401230 -25603426 + AT_rich Low_complexity Low_complexity 1 22 0 7 610 506 299 16 12 chrUextra 3401266 3401510 -25603146 + HMSBEAGLE_I LTR Gypsy 4838 5082 -1447 7 610 4787 0 0 0 chrUextra 3402686 3403244 -25601412 + FW_DM LINE Jockey 4135 4692 0 7 610 3481 5 0 0 chrUextra 3403244 3403649 -25601007 - DMRT1B LINE R1 -2785 2398 1994 7 610 3043 112 115 6 chrUextra 3403751 3404291 -25600365 + TAHRE LINE telomeric 1074 1672 -8791 7 610 562 70 68 23 chrUextra 3404285 3404373 -25600283 + ACCORD2_LTR LTR Gypsy 124 215 0 7 610 1566 119 8 0 chrUextra 3404373 3404617 -25600039 + HETA LINE telomeric 2432 2677 -3404 7 610 590 152 0 0 chrUextra 3404613 3404712 -25599944 + HETA LINE telomeric 2959 3057 -3024 7 610 721 11 11 0 chrUextra 3404812 3404903 -25599753 + NTS_DM Other Other 42 133 -107 7 610 1252 18 0 6 chrUextra 3404903 3405068 -25599588 + NTS_DM Other Other 38 201 -39 7 610 21 57 0 0 chrUextra 3405068 3405103 -25599553 + AT_rich Low_complexity Low_complexity 1 35 0 7 610 832 9 9 27 chrUextra 3405129 3405240 -25599416 + NTS_DM Other Other 25 133 -107 7 610 1150 22 113 21 chrUextra 3405240 3405426 -25599230 + NTS_DM Other Other 38 240 0 7 610 1756 17 17 17 chrUextra 3405426 3405666 -25598990 + NTS_DM Other Other 1 240 0 7 610 925 9 0 0 chrUextra 3405666 3405774 -25598882 + NTS_DM Other Other 1 108 -132 7 610 2438 24 0 0 chrUextra 3405874 3406167 -25598489 + R1_DM LINE R1 5064 5356 0 7 610 4471 65 57 3 chrUextra 3406200 3406835 -25597821 + R1_DM LINE R1 1 669 -4687 7 76 2426 87 26 32 chrUextra 3406936 3407896 -25596760 + DMSAT6 Satellite Satellite 1 953 -97 7 611 7948 18 0 1 chrUextra 3407998 3408960 -25595696 + DOC2_DM LINE Jockey 2740 3700 -1093 7 611 1804 0 0 0 chrUextra 3409060 3409269 -25595387 + DM297_LTR LTR Gypsy 206 414 0 7 611 3054 3 0 24 chrUextra 3409275 3409651 -25595005 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 611 3064 0 0 3 chrUextra 3409651 3410020 -25594636 + ROVER-I_DM LTR Gypsy 1 368 -6216 7 611 745 0 0 0 chrUextra 3410122 3410208 -25594448 - FW_DM LINE Jockey -2283 2409 2324 7 611 3716 2 0 0 chrUextra 3410203 3410632 -25594024 - FW_DM LINE Jockey -4263 429 1 7 611 2017 183 7 7 chrUextra 3410633 3411084 -25593572 - SAR_DM Satellite Satellite -592 880 430 7 611 221 208 38 0 chrUextra 3411663 3411716 -25592940 + (CATA)n Simple_repeat Simple_repeat 1 55 0 7 611 5549 106 83 4 chrUextra 3412246 3413206 -25591450 + Gypsy12_I LTR Gypsy 3240 4275 -1271 7 611 1587 5 0 0 chrUextra 3413308 3413511 -25591145 + (TTATA)n Simple_repeat Simple_repeat 1 203 0 7 611 1167 112 0 0 chrUextra 3413514 3413693 -25590963 + (TATTG)n Simple_repeat Simple_repeat 2 180 0 7 611 1512 24 0 5 chrUextra 3413700 3414091 -25590565 + (TTATA)n Simple_repeat Simple_repeat 1 388 0 7 611 1227 35 6 17 chrUextra 3414096 3414270 -25590386 + BLASTOPIA_LTR LTR Gypsy 1 172 -103 7 611 180 239 0 0 chrUextra 3414985 3415148 -25589508 + (TTTG)n Simple_repeat Simple_repeat 4 166 0 7 611 233 0 0 161 chrUextra 3415120 3415331 -25589325 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 7 611 2117 26 0 25 chrUextra 3415432 3415711 -25588945 + BATUMI_I LTR Pao 7013 7284 -679 7 611 2886 29 18 0 chrUextra 3415709 3416090 -25588566 - PROTOP DNA P -2431 2049 1662 7 611 2303 27 3 0 chrUextra 3416099 3416394 -25588262 - PROTOP DNA P -3893 587 292 7 611 3089 3 0 0 chrUextra 3416494 3416850 -25587806 - DOC LINE Jockey -4366 359 4 7 611 1663 177 25 11 chrUextra 3416852 3417415 -25587241 - SAR_DM Satellite Satellite -542 571 1 7 611 7602 21 59 1 chrUextra 3417556 3418518 -25586138 + DOC2_DM LINE Jockey 1930 2947 -1846 7 611 2106 8 11 19 chrUextra 3418618 3418882 -25585774 + DM1731_I LTR Copia 3715 3976 0 7 611 2644 42 0 0 chrUextra 3418882 3419218 -25585438 + DM1731_LTR LTR Copia 1 336 0 7 611 1557 17 8 3 chrUextra 3419218 3419580 -25585076 + (TTATA)n Simple_repeat Simple_repeat 1 364 0 7 611 2221 171 16 9 chrUextra 3419680 3420636 -25584020 - SAR_DM Satellite Satellite -682 961 1 7 611 3135 84 6 4 chrUextra 3420742 3421244 -25583412 - S_DM DNA Tc1 -1233 503 1 7 611 2464 44 0 6 chrUextra 3421244 3421566 -25583090 - MDG1_I LTR Gypsy -2667 3929 3610 7 611 645 95 0 9 chrUextra 3421567 3421673 -25582983 - MDG1_I LTR Gypsy -5246 1350 1246 7 611 30 0 0 0 chrUextra 3421879 3421909 -25582747 + AT_rich Low_complexity Low_complexity 1 30 0 7 611 30 83 0 0 chrUextra 3422477 3422549 -25582107 + AT_rich Low_complexity Low_complexity 1 72 0 7 611 2398 98 12 56 chrUextra 3422886 3423825 -25580831 + DMSAT6 Satellite Satellite 1 897 0 7 611 7373 16 26 5 chrUextra 3423928 3424890 -25579766 - IDEFIX_I LTR Gypsy -1055 4573 3592 7 611 1882 14 0 0 chrUextra 3424990 3425212 -25579444 - BATUMI_I LTR Pao -7741 222 1 7 611 1671 42 4 44 chrUextra 3425212 3425463 -25579193 - BATUMI_LTR LTR Pao 0 272 32 7 611 1547 219 102 6 chrUextra 3425479 3425952 -25578704 + ROVER-I_DM LTR Gypsy 3241 3758 -2826 7 611 932 79 6 20 chrUextra 3426052 3426952 -25577704 + RSP Satellite Satellite 1 888 0 7 611 277 0 0 0 chrUextra 3427117 3427152 -25577504 + PROTOP DNA P 248 282 -4198 7 611 6867 28 7 17 chrUextra 3427151 3428076 -25576580 + PROTOP DNA P 388 1302 -3178 7 611 430 170 19 0 chrUextra 3428176 3428282 -25576374 + ARS406_DM Unknown Unknown 11 118 -235 7 611 1109 172 26 9 chrUextra 3428278 3429041 -25575615 - SAR_DM Satellite Satellite -680 775 1 7 611 390 136 25 0 chrUextra 3429052 3429133 -25575523 - SAR_DM Satellite Satellite -1043 429 347 7 611 2982 36 169 14 chrUextra 3429238 3429820 -25574836 - PROTOP_B DNA P -480 673 1 7 611 276 95 0 0 chrUextra 3429820 3429858 -25574798 + STALKER4_LTR LTR Gypsy 48 85 -317 7 611 245 0 65 22 chrUextra 3429858 3429904 -25574752 + (TAA)n Simple_repeat Simple_repeat 1 48 0 7 611 45 55 0 0 chrUextra 3430071 3430144 -25574512 + AT_rich Low_complexity Low_complexity 1 73 0 7 611 1620 0 0 0 chrUextra 3430305 3430485 -25574171 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 7 611 732 128 24 28 chrUextra 3430485 3430773 -25573883 + CT-rich Low_complexity Low_complexity 1 286 0 7 611 783 106 39 28 chrUextra 3430816 3431098 -25573558 + GA-rich Low_complexity Low_complexity 1 285 0 7 611 2934 188 23 13 chrUextra 3431361 3432321 -25572335 + SAR_DM Satellite Satellite 1 969 -208 7 611 7878 9 0 9 chrUextra 3432422 3433383 -25571273 - STALKER4_I LTR Gypsy -787 5743 4792 7 611 918 244 19 55 chrUextra 3433483 3433795 -25570861 + Gypsy12_LTR LTR Gypsy 228 528 -1808 7 611 444 221 31 38 chrUextra 3434154 3434314 -25570342 + Gypsy12_LTR LTR Gypsy 920 1078 -1258 7 611 352 263 17 9 chrUextra 3434326 3434441 -25570215 + Gypsy12_LTR LTR Gypsy 1158 1273 -1063 7 611 4518 83 104 12 chrUextra 3434544 3435260 -25569396 + Gypsy12_I LTR Gypsy 4765 5546 0 7 611 1225 171 12 25 chrUextra 3435260 3435505 -25569151 + Gypsy12_LTR LTR Gypsy 1 242 -2094 7 611 3511 201 19 26 chrUextra 3436666 3437627 -25567029 + SAR_DM Satellite Satellite 1 953 -203 7 611 3519 108 100 81 chrUextra 3438788 3439749 -25564907 + BATUMI_I LTR Pao 13 991 -6972 7 611 8142 5 15 0 chrUextra 3439849 3440810 -25563846 - MDG3_I LTR Gypsy -3747 1239 265 7 611 4942 41 3 2 chrUextra 3441971 3442606 -25562050 + R1_DM LINE R1 824 1459 -3897 7 611 2730 30 0 0 chrUextra 3442597 3442930 -25561726 + R1_DM LINE R1 1402 1734 -3622 7 611 7917 40 9 3 chrUextra 3443032 3443992 -25560664 - MAX_I LTR Pao -4715 3199 2234 7 611 7823 28 113 1 chrUextra 3444092 3445052 -25559604 - R1_DM LINE R1 -2901 2455 1388 7 611 5493 2 0 0 chrUextra 3445152 3445754 -25558902 - DOC LINE Jockey -4120 605 4 7 611 3118 6 3 3 chrUextra 3445756 3446112 -25558544 + Invader3_I LTR Gypsy 3079 3434 -1454 7 611 989 86 6 18 chrUextra 3446222 3447156 -25557500 - RSP Satellite Satellite 0 923 1 7 611 2491 115 25 9 chrUextra 3447272 3448232 -25556424 - DMSAT6 Satellite Satellite -51 975 1 7 611 3834 191 22 21 chrUextra 3448332 3449292 -25555364 - SAR_DM Satellite Satellite -446 1026 66 7 611 8104 1 36 0 chrUextra 3449392 3450352 -25554304 - ROO_I LTR Pao -7051 1205 211 7 611 1824 0 0 0 chrUextra 3450456 3450662 -25553994 + Copia_I LTR Copia 4388 4593 0 7 611 2116 4 57 4 chrUextra 3450662 3450891 -25553765 + Copia_LTR LTR Copia 1 228 -48 7 611 216 0 0 0 chrUextra 3450891 3450915 -25553741 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 7 611 2116 4 57 4 chrUextra 3450915 3450947 -25553709 + Copia_LTR LTR Copia 229 274 -2 7 611 282 279 12 0 chrUextra 3452137 3452223 -25552433 + Gypsy5_I LTR Gypsy 5198 5284 -1225 7 611 3788 204 16 18 chrUextra 3452572 3453531 -25551125 - SAR_DM Satellite Satellite -404 956 1 7 611 1699 104 17 64 chrUextra 3454801 3455099 -25549557 - Gypsy6A_LTR LTR Gypsy -118 302 19 7 611 4712 25 0 0 chrUextra 3455103 3455651 -25549005 - MDG1_I LTR Gypsy -2500 4096 3549 7 611 4837 26 112 35 chrUextra 3455752 3456712 -25547944 + DMCR1A LINE CR1 2460 3493 -977 7 611 4077 196 12 20 chrUextra 3456813 3457768 -25546888 + SAR_DM Satellite Satellite 1 947 -203 7 611 4250 8 0 0 chrUextra 3457872 3458356 -25546300 - QUASIMODO_LTR LTR Gypsy -174 484 1 7 611 3064 38 9 16 chrUextra 3458356 3458786 -25545870 - QUASIMODO_I LTR Gypsy 0 6060 5634 7 611 326 0 0 0 chrUextra 3458791 3458832 -25545824 - QUASIMODO_I LTR Gypsy -789 5271 5231 7 611 5669 9 0 0 chrUextra 3458932 3459564 -25545092 - LSU-rRNA_Dme rRNA rRNA -687 3213 2582 7 611 2675 20 0 0 chrUextra 3459584 3459889 -25544767 - R2_DM LINE R2 -333 3274 2970 7 611 4557 4 0 2 chrUextra 3459992 3460506 -25544150 + FW_DM LINE Jockey 4177 4689 -3 7 611 4026 2 2 0 chrUextra 3460504 3460952 -25543704 - DOC LINE Jockey -2003 2722 2274 7 611 3760 187 20 24 chrUextra 3461052 3462005 -25542651 + SAR_DM Satellite Satellite 198 1146 -326 7 611 2175 38 4 0 chrUextra 3462120 3462387 -25542269 + DMCR1A LINE CR1 4203 4470 0 7 611 1123 82 3 3 chrUextra 3462808 3462976 -25541680 + FW2_DM LINE Jockey 1 156 -3805 7 611 589 77 143 0 chrUextra 3462978 3463069 -25541587 + FW2_DM LINE Jockey 384 487 -3474 7 611 7087 97 1 0 chrUextra 3463171 3464130 -25540526 - Gypsy12_I LTR Gypsy -1411 4135 3176 7 611 1566 5 0 69 chrUextra 3464230 3464432 -25540224 + DM176_LTR LTR Gypsy 96 283 -224 7 611 2029 32 16 0 chrUextra 3464433 3464686 -25539970 + DM176_LTR LTR Gypsy 251 507 0 7 611 28 0 0 0 chrUextra 3464686 3464714 -25539942 + AT_rich Low_complexity Low_complexity 1 28 0 7 611 3933 32 0 0 chrUextra 3464715 3465189 -25539467 - ROO_I LTR Pao -2741 5515 5042 7 611 289 318 95 0 chrUextra 3465483 3465609 -25539047 - OSVALDO_I LTR Gypsy -4172 2481 2344 7 611 438 293 23 0 chrUextra 3465702 3465876 -25538780 - OSVALDO_I LTR Gypsy -4570 2083 1906 7 611 342 123 173 27 chrUextra 3465874 3465949 -25538707 - Gypsy8_I LTR Gypsy -3330 1017 932 7 611 1481 88 15 0 chrUextra 3465938 3466142 -25538514 - Gypsy8_I LTR Gypsy -3867 480 274 7 611 424 223 79 42 chrUextra 3466033 3466248 -25538408 + DMSAT6 Satellite Satellite 117 339 -131 7 611 690 132 0 0 chrUextra 3466348 3466462 -25538194 - ARS406_DM Unknown Unknown -239 114 1 7 611 3975 192 11 17 chrUextra 3466369 3467299 -25537357 + SAR_DM Satellite Satellite 195 1118 -354 7 611 275 206 0 0 chrUextra 3467244 3467307 -25537349 - XDMR Unknown Unknown 0 361 299 7 611 3317 221 20 25 chrUextra 3467407 3468366 -25536290 - SAR_DM Satellite Satellite -488 954 1 7 611 7319 28 33 3 chrUextra 3468466 3469384 -25535272 - PROTOP_A DNA P -88 1017 73 7 611 339 43 22 0 chrUextra 3469379 3469425 -25535231 + ROVER-I_DM LTR Gypsy 5141 5187 -1397 7 611 5702 85 22 0 chrUextra 3469526 3470280 -25534376 + Gypsy12_I LTR Gypsy 2947 3717 -1829 7 611 1263 122 0 0 chrUextra 3470301 3470482 -25534174 + Gypsy12_I LTR Gypsy 3830 4010 -1536 7 611 8161 20 3 0 chrUextra 3470585 3471543 -25533113 - STALKER4_I LTR Gypsy -3777 2753 1793 7 611 4799 101 76 32 chrUextra 3471643 3472526 -25532130 + PROTOP_B DNA P 232 1153 0 7 611 1049 170 143 70 chrUextra 3473081 3473353 -25531303 + G3_DM LINE Jockey 221 512 -4093 7 611 505 299 60 14 chrUextra 3473358 3473575 -25531081 + DIVER2_I LTR Pao 1593 1819 -2328 7 611 1267 20 13 0 chrUextra 3473761 3473913 -25530743 - DM176_I LTR Gypsy -6266 154 1 7 611 3094 49 59 47 chrUextra 3473913 3474401 -25530255 - DM176_LTR LTR Gypsy -27 480 1 7 611 2419 44 35 0 chrUextra 3474405 3474720 -25529936 + IDEFIX_I LTR Gypsy 2176 2501 -3127 7 611 3860 201 11 19 chrUextra 3474820 3475775 -25528881 + SAR_DM Satellite Satellite 301 1248 -224 7 611 1353 62 0 0 chrUextra 3476224 3476451 -25528205 + (TCTTG)n Simple_repeat Simple_repeat 1 227 0 7 611 4410 6 2 0 chrUextra 3477408 3477897 -25526759 + Gypsy4_I LTR Gypsy 2421 2910 -3378 7 611 3432 150 192 18 chrUextra 3478048 3478955 -25525701 + STALKER4_I LTR Gypsy 1198 2263 -4267 7 611 3929 169 29 28 chrUextra 3479056 3479983 -25524673 - SAR_DM Satellite Satellite -365 1107 180 7 611 951 73 0 0 chrUextra 3479877 3480013 -25524643 + ARS406_DM Unknown Unknown 1 136 -217 7 611 8129 4 80 0 chrUextra 3480113 3481071 -25523585 + DMRT1B LINE R1 3678 4712 -471 7 611 3998 193 14 24 chrUextra 3481171 3482129 -25522527 - SAR_DM Satellite Satellite -372 948 1 7 611 3560 107 190 0 chrUextra 3482229 3483187 -25521469 + IDEFIX_I LTR Gypsy 3639 4779 -849 7 611 2536 181 9 3 chrUextra 3483287 3484245 -25520411 - SAR_DM Satellite Satellite -436 963 1 7 611 8628 2 20 1 chrUextra 3484345 3485303 -25519353 - Gypsy6_I LTR Gypsy -2722 4290 3315 7 611 2527 82 46 2 chrUextra 3485403 3485817 -25518839 + TART LINE telomeric 9305 9736 -4741 7 611 457 257 43 14 chrUextra 3485813 3485951 -25518705 + TAHRE LINE telomeric 9756 9897 -566 7 611 3262 34 0 5 chrUextra 3485951 3486361 -25518295 + TRANSIB2 DNA Transib 1 408 -2436 7 611 8260 24 5 3 chrUextra 3486461 3487419 -25517237 - BATUMI_I LTR Pao -2022 5941 4982 7 611 3596 198 22 28 chrUextra 3487519 3488472 -25516184 - SAR_DM Satellite Satellite -469 1003 57 7 611 6049 61 50 26 chrUextra 3488577 3489535 -25515121 + STALKER4_I LTR Gypsy 667 1647 -4883 7 611 24 96 0 0 chrUextra 3490125 3490198 -25514458 + AT_rich Low_complexity Low_complexity 1 73 0 7 611 756 180 328 51 chrUextra 3490693 3490986 -25513670 + TART LINE telomeric 10118 10491 -3986 7 611 3472 60 49 39 chrUextra 3491113 3491620 -25513036 + PROTOP DNA P 1 512 -3968 7 611 2548 68 171 2 chrUextra 3491751 3492393 -25512263 + STALKER4_I LTR Gypsy 4846 5596 -934 7 611 2428 47 88 0 chrUextra 3492390 3492709 -25511947 + Baggins1 LINE LOA 1 347 -5106 7 611 7025 76 27 1 chrUextra 3492809 3493767 -25510889 + DM412 LTR Gypsy 1984 2966 -3931 7 611 3407 3 0 0 chrUextra 3494925 3495305 -25509351 - Copia_I LTR Copia -4213 380 1 7 611 2329 14 0 0 chrUextra 3495305 3495581 -25509075 - Copia_LTR LTR Copia 0 276 1 7 611 2459 3 3 3 chrUextra 3495581 3495883 -25508773 + QUASIMODO_I LTR Gypsy 4764 5065 -995 7 611 343 57 0 70 chrUextra 3495995 3496052 -25508604 + DNAREP1_DM LINE Penelope 508 560 -34 7 611 32 43 0 0 chrUextra 3496071 3496117 -25508539 + AT_rich Low_complexity Low_complexity 1 46 0 7 611 363 360 4 1 chrUextra 3496641 3496885 -25507771 - BURDOCK_I LTR Gypsy -4878 982 737 7 611 8023 32 5 0 chrUextra 3497041 3497999 -25506657 - R1_DM LINE R1 -2040 3316 2354 7 611 7706 4 26 48 chrUextra 3498099 3499056 -25505600 - LSU-rRNA_Dme rRNA rRNA -1428 2472 1537 7 611 456 331 18 13 chrUextra 3499260 3499534 -25505122 - GTWIN_I LTR Gypsy -2883 3538 3347 7 611 594 317 20 8 chrUextra 3499526 3499777 -25504879 - GTWIN_I LTR Gypsy -2914 3507 3254 7 611 283 279 0 0 chrUextra 3499909 3499988 -25504668 - DM176_I LTR Gypsy -3175 3245 3167 7 611 403 70 0 0 chrUextra 3500056 3500113 -25504543 - TLD2 Unknown Unknown 0 218 162 7 611 7645 19 2 3 chrUextra 3500290 3501170 -25503486 - DOC2_DM LINE Jockey 0 4793 3915 7 611 940 45 0 0 chrUextra 3502115 3502227 -25502429 - DM1731_LTR LTR Copia 0 336 225 7 611 8245 22 2 3 chrUextra 3502327 3503284 -25501372 - Gypsy4_I LTR Gypsy -912 5376 4421 7 611 869 95 0 0 chrUextra 3503384 3503510 -25501146 - ARS406_DM Unknown Unknown -227 126 1 7 611 4223 184 7 22 chrUextra 3503414 3504340 -25500316 + SAR_DM Satellite Satellite 192 1103 -369 7 611 3724 5 0 2 chrUextra 3504441 3504855 -25499801 - R1_DM LINE R1 -139 5217 4805 7 611 4761 4 0 6 chrUextra 3504869 3505398 -25499258 - R1_DM LINE R1 0 5356 4831 7 611 4251 183 27 21 chrUextra 3505499 3506455 -25498201 + SAR_DM Satellite Satellite 252 1213 -259 7 611 307 139 59 157 chrUextra 3506555 3506708 -25497948 - BATUMI_I LTR Pao -7223 740 603 7 611 3311 31 26 0 chrUextra 3506723 3507106 -25497550 + Invader6_LTR LTR Gypsy 1 393 0 7 611 3761 5 2 0 chrUextra 3507106 3507512 -25497144 + Invader6_I LTR Gypsy 1 407 -3692 7 611 4268 16 71 24 chrUextra 3507612 3508569 -25496087 - CIRCE LINE Composite -1766 4590 3589 7 611 2371 216 34 41 chrUextra 3508669 3509626 -25495030 + SAR_DM Satellite Satellite 1 950 -414 7 611 335 127 18 0 chrUextra 3509726 3509781 -25494875 + ARS406_DM Unknown Unknown 132 187 -166 7 611 3119 202 19 19 chrUextra 3509740 3510683 -25493973 - SAR_DM Satellite Satellite -975 943 1 7 611 3397 194 11 16 chrUextra 3510785 3511739 -25492917 + SAR_DM Satellite Satellite 1 949 -216 7 611 1620 24 0 0 chrUextra 3511841 3512266 -25492390 + (TTATA)n Simple_repeat Simple_repeat 1 425 0 7 611 1870 21 17 17 chrUextra 3512308 3512548 -25492108 + NTS_DM Other Other 1 240 0 7 611 1797 38 17 17 chrUextra 3512548 3512788 -25491868 + NTS_DM Other Other 1 240 0 7 611 1175 231 92 3 chrUextra 3513954 3514270 -25490386 - Invader3_I LTR Gypsy -2839 2049 1706 7 611 693 78 47 37 chrUextra 3514270 3514377 -25490279 - PROTOP_B DNA P 0 1153 1046 7 611 258 191 0 0 chrUextra 3514378 3514425 -25490231 - Invader3_I LTR Gypsy -3417 1471 1425 7 611 1829 235 117 12 chrUextra 3514410 3514905 -25489751 - Invader3_I LTR Gypsy -4039 849 303 7 611 2492 89 19 53 chrUextra 3515036 3515523 -25489133 + DMSAT6 Satellite Satellite 1 470 0 7 611 2416 101 23 12 chrUextra 3515539 3515968 -25488688 + DMSAT6 Satellite Satellite 1 434 -36 7 611 4585 8 0 0 chrUextra 3516092 3516599 -25488057 - DM176_LTR LTR Gypsy 0 507 1 7 611 3800 0 0 0 chrUextra 3516601 3517024 -25487632 - LSU-rRNA_Dme rRNA rRNA -2976 924 502 7 611 26 30 0 0 chrUextra 3517124 3517157 -25487499 + AT_rich Low_complexity Low_complexity 1 33 0 7 611 4668 22 15 0 chrUextra 3517534 3518080 -25486576 - PROTOP_A DNA P 0 1105 552 7 611 4474 32 66 2 chrUextra 3518180 3518767 -25485889 - FW_DM LINE Jockey -4067 625 1 7 611 2947 40 0 17 chrUextra 3518775 3519135 -25485521 + R1_DM LINE R1 1377 1730 -3626 7 611 3493 110 60 14 chrUextra 3519236 3519811 -25484845 + HETA LINE telomeric 2955 3708 -2373 7 611 2165 118 66 19 chrUextra 3519828 3520192 -25484464 + HETA LINE telomeric 3982 4362 -1719 7 611 1065 29 0 42 chrUextra 3520746 3520890 -25483766 - NTS_DM Other Other -78 162 25 7 611 268 196 0 19 chrUextra 3520960 3521012 -25483644 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 611 1603 41 0 10 chrUextra 3521050 3521248 -25483408 + G_DM LINE Jockey 2653 2848 -1498 7 611 7916 29 3 8 chrUextra 3521348 3522303 -25482353 - NINJA_I LTR Pao -3369 2642 1693 7 611 1361 30 12 0 chrUextra 3522404 3522571 -25482085 - BATUMI_I LTR Pao -1368 6595 6427 7 611 1384 53 0 0 chrUextra 3522594 3522782 -25481874 + BATUMI_I LTR Pao 7303 7490 -473 7 611 5024 17 7 0 chrUextra 3522779 3523360 -25481296 - STALKER4_I LTR Gypsy -3863 2667 2083 7 611 8896 2 1 0 chrUextra 3523460 3524416 -25480240 - Gypsy2_I LTR Gypsy -497 5638 4682 7 611 1929 5 0 0 chrUextra 3524516 3524729 -25479927 + Copia_I LTR Copia 4381 4593 0 7 611 2443 7 0 0 chrUextra 3524729 3525005 -25479651 + Copia_LTR LTR Copia 1 276 0 7 611 251 0 0 0 chrUextra 3525005 3525039 -25479617 + Copia_LTR LTR Copia 243 276 0 7 611 712 306 41 48 chrUextra 3525080 3525472 -25479184 + MICROPIA_I LTR Gypsy 1936 2324 -2152 7 611 5510 99 5 18 chrUextra 3525679 3526513 -25478143 + M4DM DNA Transib 406 1228 -207 7 611 764 21 0 49 chrUextra 3526629 3526731 -25477925 - NINJA_LTR LTR Pao -220 97 1 7 611 1911 14 0 0 chrUextra 3526731 3526947 -25477709 - NINJA_I LTR Pao 0 6011 5796 7 611 5329 33 2 2 chrUextra 3526953 3527584 -25477072 - NINJA_I LTR Pao -423 5588 4958 7 611 3735 202 27 24 chrUextra 3527684 3528640 -25476016 - SAR_DM Satellite Satellite -850 959 1 7 611 7278 14 156 27 chrUextra 3528740 3529696 -25474960 - QUASIMODO_I LTR Gypsy -3068 2992 1914 7 611 2487 97 22 38 chrUextra 3529796 3530752 -25473904 - DMSAT6 Satellite Satellite -162 940 1 7 611 5799 20 32 0 chrUextra 3530852 3531808 -25472848 + R1_DM LINE R1 1979 2965 -2391 7 611 1872 24 117 0 chrUextra 3531908 3532155 -25472501 + ROO_I LTR Pao 5011 5286 -2970 7 611 3539 51 33 2 chrUextra 3532135 3532587 -25472069 + ROO_I LTR Pao 5430 5895 -2361 7 611 527 40 13 51 chrUextra 3532965 3533044 -25471612 + BATUMI_LTR LTR Pao 197 272 0 7 611 205 321 0 0 chrUextra 3533105 3533186 -25471470 + CT-rich Low_complexity Low_complexity 2 82 0 7 611 2043 46 4 206 chrUextra 3533430 3533920 -25470736 + BATUMI_I LTR Pao 504 894 -7069 7 611 954 341 79 17 chrUextra 3534030 3534687 -25469969 - Invader6_I LTR Gypsy -1773 2326 1629 7 611 275 279 0 0 chrUextra 3534766 3534834 -25469822 - Invader4_I LTR Gypsy -1111 1302 1235 7 611 24 32 0 0 chrUextra 3534840 3534871 -25469785 + AT_rich Low_complexity Low_complexity 1 31 0 7 611 1469 46 0 76 chrUextra 3535082 3535292 -25469364 - DMCR1A LINE CR1 -1012 3458 3265 7 611 6451 27 0 3 chrUextra 3535292 3536032 -25468624 - DMCR1A LINE CR1 -3544 926 189 7 611 252 226 0 0 chrUextra 3536133 3536186 -25468470 - TV1I LTR Gypsy -2042 3921 3869 7 611 939 309 50 37 chrUextra 3536191 3536785 -25467871 - QUASIMODO_I LTR Gypsy -5069 991 390 7 611 351 25 0 0 chrUextra 3537188 3537237 -25467419 + MDG1_I LTR Gypsy 6558 6596 0 7 611 444 86 0 0 chrUextra 3537242 3537312 -25467344 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 611 3174 17 0 0 chrUextra 3537312 3537668 -25466988 + MDG1_LTR LTR Gypsy 87 442 0 7 611 21 36 0 0 chrUextra 3537817 3537845 -25466811 + AT_rich Low_complexity Low_complexity 1 28 0 7 611 21 89 0 0 chrUextra 3538812 3538868 -25465788 + AT_rich Low_complexity Low_complexity 1 56 0 7 611 21 57 0 0 chrUextra 3538906 3538941 -25465715 + AT_rich Low_complexity Low_complexity 1 35 0 7 612 26 30 0 0 chrUextra 3538986 3539019 -25465637 + AT_rich Low_complexity Low_complexity 1 33 0 7 612 6865 101 11 0 chrUextra 3539298 3540253 -25464403 + HETA LINE telomeric 2182 3146 -2935 7 612 2503 103 12 38 chrUextra 3540355 3541308 -25463348 - DMSAT6 Satellite Satellite -5 927 1 7 612 3641 215 32 11 chrUextra 3541408 3542356 -25462300 + SAR_DM Satellite Satellite 205 1172 -300 7 612 3596 186 38 25 chrUextra 3543519 3544473 -25460183 + SAR_DM Satellite Satellite 1 965 -208 7 612 463 179 31 39 chrUextra 3544587 3544715 -25459941 + DNAREP1_DM LINE Penelope 190 316 -278 7 612 385 281 7 7 chrUextra 3544711 3544847 -25459809 - DNAREP1_DM LINE Penelope -291 303 168 7 612 26 30 0 0 chrUextra 3544863 3544896 -25459760 + AT_rich Low_complexity Low_complexity 1 33 0 7 612 594 238 41 14 chrUextra 3544991 3545136 -25459520 + DMCR1A LINE CR1 850 998 -3472 7 612 7294 45 45 0 chrUextra 3545628 3546579 -25458077 - STALKER4_I LTR Gypsy -2031 4582 3554 7 612 2847 88 15 8 chrUextra 3546683 3547196 -25457460 - G2_DM LINE Jockey -2781 321 4 7 612 628 14 0 0 chrUextra 3547194 3547267 -25457389 + STALKER4_I LTR Gypsy 6458 6530 0 7 612 3260 30 0 0 chrUextra 3547267 3547638 -25457018 + STALKER4_LTR LTR Gypsy 1 371 -31 7 612 8628 6 7 2 chrUextra 3547738 3548693 -25455963 - TART_B1 LINE telomeric -1643 9011 8052 7 612 2297 4 0 0 chrUextra 3548793 3549042 -25455614 + G5_DM LINE Jockey 3567 3815 -1041 7 612 6213 31 1 0 chrUextra 3549032 3549748 -25454908 + G5_DM LINE Jockey 3973 4689 -167 7 612 2377 25 3 7 chrUextra 3549848 3550136 -25454520 + IDEFIX_LTR LTR Gypsy 308 594 0 7 612 25 0 0 0 chrUextra 3550314 3550339 -25454317 + AT_rich Low_complexity Low_complexity 1 25 0 7 612 1199 20 81 0 chrUextra 3550655 3550803 -25453853 + IDEFIX_I LTR Gypsy 1 160 -5468 7 612 3813 195 38 20 chrUextra 3550909 3551858 -25452798 - SAR_DM Satellite Satellite -203 1269 304 7 612 6418 44 12 0 chrUextra 3551958 3552728 -25451928 - ZAM_I LTR Gypsy -3390 4100 3322 7 612 1494 33 0 0 chrUextra 3552728 3552909 -25451747 - ZAM_I LTR Gypsy -4401 3089 2909 7 612 7328 32 1 2 chrUextra 3553013 3553871 -25450785 + G_DM LINE Jockey 2312 3168 -1178 7 612 872 20 0 0 chrUextra 3553867 3553968 -25450688 + G_DM LINE Jockey 3405 3505 -841 7 612 3709 28 0 9 chrUextra 3554068 3554502 -25450154 + BATUMI_I LTR Pao 5968 6397 -1566 7 612 3935 40 8 12 chrUextra 3554522 3555023 -25449633 - BATUMI_I LTR Pao -962 7001 6503 7 612 3816 173 55 30 chrUextra 3555123 3556071 -25448585 - SAR_DM Satellite Satellite -321 1151 180 7 612 32 43 0 0 chrUextra 3556203 3556249 -25448407 + AT_rich Low_complexity Low_complexity 1 46 0 7 612 268 340 6 6 chrUextra 3556759 3556922 -25447734 - BURDOCK_I LTR Gypsy -4878 982 820 7 612 2444 105 22 11 chrUextra 3557233 3558188 -25446468 + DMSAT6 Satellite Satellite 1 965 -108 7 612 2639 56 59 0 chrUextra 3558288 3558663 -25445993 + PROTOP_A DNA P 709 1105 0 7 612 26 30 0 0 chrUextra 3559036 3559069 -25445587 + AT_rich Low_complexity Low_complexity 1 33 0 7 612 1201 7 0 0 chrUextra 3559343 3559489 -25445167 - STALKER4_LTR LTR Gypsy -256 146 1 7 612 23 0 0 0 chrUextra 3559536 3559559 -25445097 + AT_rich Low_complexity Low_complexity 1 23 0 7 612 565 272 74 18 chrUextra 3559620 3559904 -25444752 + Copia_I LTR Copia 1653 1952 -2641 7 612 1968 12 8 0 chrUextra 3559957 3560197 -25444459 - STALKER4_LTR LTR Gypsy -91 311 70 7 612 225 242 42 42 chrUextra 3560202 3560297 -25444359 + Gypsy_DS LTR Gypsy 6122 6216 -1306 7 612 4192 14 0 0 chrUextra 3560398 3560894 -25443762 - PROTOP_A DNA P -609 496 1 7 612 1158 121 0 0 chrUextra 3561454 3561879 -25442777 + (TA)n Simple_repeat Simple_repeat 1 425 0 7 612 1405 204 5 21 chrUextra 3561924 3562406 -25442250 + Gypsy8_I LTR Gypsy 1035 1246 -3101 7 612 7338 19 2 11 chrUextra 3562507 3563461 -25441195 - IDEFIX_I LTR Gypsy -1666 3962 3017 7 612 300 0 0 0 chrUextra 3563561 3563861 -25440795 + AT_rich Low_complexity Low_complexity 1 300 0 7 612 300 0 0 0 chrUextra 3563670 3563970 -25440686 + AT_rich Low_complexity Low_complexity 1 300 0 7 612 185 5 0 0 chrUextra 3563819 3564011 -25440645 + AT_rich Low_complexity Low_complexity 1 192 0 7 612 2989 14 11 0 chrUextra 3564615 3564976 -25439680 + R1_DM LINE R1 4896 5260 -96 7 612 3935 68 40 19 chrUextra 3564974 3565569 -25439087 + R1_DM LINE R1 164 771 -4585 7 612 7465 20 37 0 chrUextra 3565669 3566623 -25438033 + STALKER4_I LTR Gypsy 2311 3299 -3231 7 612 2877 29 0 3 chrUextra 3566723 3567105 -25437551 - ROO_I LTR Pao -267 7989 7609 7 612 4849 7 0 0 chrUextra 3567105 3567677 -25436979 - ROO_I LTR Pao -1677 6579 6008 7 612 8163 1 0 1 chrUextra 3567777 3568731 -25435925 - R1_DM LINE R1 -1687 3669 2717 7 612 3886 5 0 0 chrUextra 3568831 3569276 -25435380 - GTWIN_LTR LTR Gypsy -50 445 1 7 612 4205 16 25 0 chrUextra 3569276 3569785 -25434871 - MICROPIA_I LTR Gypsy -648 3828 3307 7 612 3852 145 157 31 chrUextra 3569885 3570839 -25433817 - TART LINE telomeric -7076 7401 6328 7 612 2112 145 97 92 chrUextra 3570940 3571822 -25432834 - TART LINE telomeric -3814 10663 10040 7 612 286 152 17 0 chrUextra 3571834 3571893 -25432763 - TART LINE telomeric -4516 9961 9902 7 612 4365 10 1 66 chrUextra 3571993 3572688 -25431968 + MDG1_I LTR Gypsy 5960 6799 -98 7 612 423 100 0 0 chrUextra 3572692 3572762 -25431894 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 612 1551 16 0 0 chrUextra 3572762 3572947 -25431709 + MDG1_LTR LTR Gypsy 87 271 -171 7 612 5577 7 0 0 chrUextra 3573047 3573727 -25430929 - STALKER4_I LTR Gypsy -2799 3731 3052 7 612 2229 11 11 0 chrUextra 3573724 3574001 -25430655 - STALKER4_I LTR Gypsy -3902 2628 2349 7 612 479 122 100 0 chrUextra 3574514 3574604 -25430052 + DNAREP1_DM LINE Penelope 496 594 0 7 612 26 50 0 0 chrUextra 3574660 3574700 -25429956 + AT_rich Low_complexity Low_complexity 1 40 0 7 612 2313 80 37 37 chrUextra 3575350 3575757 -25428899 - Gypsy6A_LTR LTR Gypsy 0 420 1 7 612 1785 109 129 6 chrUextra 3575767 3576109 -25428547 - Invader1_LTR LTR Gypsy 0 423 40 7 612 4133 24 2 0 chrUextra 3576209 3576716 -25427940 - PROTOP_A DNA P -597 508 1 7 612 686 158 375 30 chrUextra 3576716 3577001 -25427655 - DNAREP1_DM LINE Penelope -20 574 193 7 612 322 200 90 0 chrUextra 3577038 3577138 -25427518 - DNAREP1_DM LINE Penelope -485 109 1 7 612 2606 3 0 0 chrUextra 3577263 3577565 -25427091 - DOC LINE Jockey -4421 304 3 7 612 5662 6 0 0 chrUextra 3577562 3578217 -25426439 + IVK_DM LINE I 3992 4646 -756 7 612 3737 187 18 22 chrUextra 3578321 3579261 -25425395 + SAR_DM Satellite Satellite 1 935 -208 7 612 3616 198 15 15 chrUextra 3579371 3580325 -25424331 - SAR_DM Satellite Satellite -676 954 1 7 612 7898 13 16 0 chrUextra 3580425 3581377 -25423279 - Invader3_I LTR Gypsy -1368 3520 2554 7 612 751 103 0 16 chrUextra 3581479 3581607 -25423049 - ARS406_DM Unknown Unknown -227 126 1 7 612 3541 182 24 26 chrUextra 3581509 3582433 -25422223 + SAR_DM Satellite Satellite 192 1113 -359 7 612 6545 59 2 15 chrUextra 3582533 3583487 -25421169 + QUASIMODO_I LTR Gypsy 994 1935 -4125 7 612 5006 0 0 0 chrUextra 3583587 3584158 -25420498 + MAX_I LTR Pao 6174 6744 -1170 7 612 3204 0 0 0 chrUextra 3584156 3584541 -25420115 + MAX_I LTR Pao 7083 7467 -447 7 612 644 35 11 0 chrUextra 3585235 3585322 -25419334 + (TTTTG)n Simple_repeat Simple_repeat 3 90 0 7 612 2432 33 0 0 chrUextra 3585695 3586001 -25418655 - QUASIMODO_I LTR Gypsy -3471 2589 2284 7 612 2365 36 3 0 chrUextra 3586004 3586310 -25418346 - QUASIMODO_I LTR Gypsy -3933 2127 1821 7 612 2384 40 3 15 chrUextra 3586319 3586649 -25418007 - QUASIMODO_I LTR Gypsy -4450 1610 1285 7 612 361 303 7 7 chrUextra 3586756 3586899 -25417757 + BURDOCK_I LTR Gypsy 850 992 -4868 7 612 5242 24 2 0 chrUextra 3587802 3588439 -25416217 + R1_DM LINE R1 4719 5356 0 7 612 2071 57 7 0 chrUextra 3588472 3588755 -25415901 + R1_DM LINE R1 1 285 -5071 7 612 1599 20 0 0 chrUextra 3588857 3589107 -25415549 + (TTATA)n Simple_repeat Simple_repeat 1 250 0 7 612 6103 0 0 1 chrUextra 3589107 3589808 -25414848 + POGO DNA Pogo 8 707 -1414 7 612 25 0 0 0 chrUextra 3589952 3589977 -25414679 + AT_rich Low_complexity Low_complexity 1 25 0 7 612 4469 12 46 0 chrUextra 3590167 3590735 -25413921 - IDEFIX_LTR LTR Gypsy 0 594 1 7 612 258 119 0 0 chrUextra 3590703 3590745 -25413911 + BARI1 DNA Tc1 3 44 -1706 7 612 423 65 65 0 chrUextra 3590755 3590848 -25413808 + (TTA)n Simple_repeat Simple_repeat 3 101 0 7 612 3029 42 3 8 chrUextra 3591153 3591540 -25413116 - DIVER2_LTR LTR Pao 0 385 1 7 612 3070 21 3 0 chrUextra 3591540 3591914 -25412742 - DIVER2_I LTR Pao 0 4147 3773 7 612 5294 0 0 2 chrUextra 3592014 3592621 -25412035 - BS2 LINE Jockey -4104 617 12 7 612 280 265 0 0 chrUextra 3592803 3592905 -25411751 - IDEFIX_I LTR Gypsy -816 4812 4711 7 612 3058 184 8 31 chrUextra 3593069 3594020 -25410636 + SAR_DM Satellite Satellite 1 928 -545 7 612 218 252 26 26 chrUextra 3594125 3594239 -25410417 + (TTTAG)n Simple_repeat Simple_repeat 3 116 0 7 612 695 181 114 124 chrUextra 3594323 3594930 -25409726 - ROVER-I_DM LTR Gypsy -5983 601 1 7 612 254 229 15 113 chrUextra 3594933 3595066 -25409590 - DMTOM1_LTR LTR Gypsy -2 408 289 7 612 7695 25 1 4 chrUextra 3595173 3596126 -25408530 + R1_DM LINE R1 1396 2345 -3011 7 612 4340 4 0 0 chrUextra 3596226 3596728 -25407928 + DMRT1B LINE R1 4682 5183 0 7 612 3751 16 0 0 chrUextra 3596735 3597179 -25407477 - R1_DM LINE R1 -760 4596 4153 7 612 3781 179 14 17 chrUextra 3597285 3598232 -25406424 - SAR_DM Satellite Satellite -425 944 1 7 612 231 36 0 0 chrUextra 3598930 3598958 -25405698 + (TTG)n Simple_repeat Simple_repeat 2 29 0 7 612 1032 26 282 0 chrUextra 3599129 3599285 -25405371 + PROTOP DNA P 1 200 -4280 7 612 25 31 0 0 chrUextra 3599754 3599786 -25404870 + AT_rich Low_complexity Low_complexity 1 32 0 7 612 2309 33 72 0 chrUextra 3600438 3600594 -25404062 + Stalker3_LTR LTR Gypsy 46 201 -171 7 612 207 0 0 0 chrUextra 3600594 3600617 -25404039 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 612 2309 33 72 0 chrUextra 3600617 3600765 -25403891 + Stalker3_LTR LTR Gypsy 202 370 -2 7 612 291 49 0 0 chrUextra 3600765 3600806 -25403850 + Stalker2_I LTR Gypsy 1 41 -7361 7 612 1921 149 27 0 chrUextra 3601021 3601391 -25403265 + Stalker2_I LTR Gypsy 242 621 -6781 7 612 4453 15 0 0 chrUextra 3601491 3602024 -25402632 - DMRT1B LINE R1 -242 4941 4409 7 612 1355 289 5 2 chrUextra 3602024 3602443 -25402213 + Invader1_I LTR Gypsy 1744 2163 -1023 7 612 7443 37 3 1 chrUextra 3602544 3603497 -25401159 - R1_DM LINE R1 -3633 1723 769 7 612 3561 186 15 17 chrUextra 3603597 3604550 -25400106 - SAR_DM Satellite Satellite -447 951 1 7 612 2253 118 38 15 chrUextra 3604651 3605603 -25399053 + DMSAT6 Satellite Satellite 1 974 -113 7 612 306 0 0 0 chrUextra 3605703 3605739 -25398917 + HOBO DNA hAT 869 904 -2112 7 612 4353 0 0 10 chrUextra 3605737 3606241 -25398415 + HOBO DNA hAT 2518 3016 0 7 612 7001 52 13 6 chrUextra 3606759 3607709 -25396947 + R1_DM LINE R1 234 1189 -4167 7 612 25 0 0 0 chrUextra 3608061 3608086 -25396570 + AT_rich Low_complexity Low_complexity 1 25 0 7 612 40 0 0 0 chrUextra 3608143 3608183 -25396473 + AT_rich Low_complexity Low_complexity 1 40 0 7 612 3407 199 20 16 chrUextra 3608862 3609814 -25394842 - SAR_DM Satellite Satellite -446 955 1 7 612 3560 203 13 17 chrUextra 3609915 3610863 -25393793 + SAR_DM Satellite Satellite 302 1245 -227 7 612 551 0 128 9 chrUextra 3610970 3611264 -25393392 + (TA)n Simple_repeat Simple_repeat 1 328 0 7 612 525 319 37 37 chrUextra 3611289 3611587 -25393069 - Copia2_I LTR Copia -2381 1781 1392 7 612 2368 167 18 8 chrUextra 3612022 3612530 -25392126 + SAR_DM Satellite Satellite 425 937 -535 7 612 1791 174 7 10 chrUextra 3612568 3612974 -25391682 + SAR_DM Satellite Satellite 580 984 -488 7 612 7870 16 18 2 chrUextra 3613074 3614027 -25390629 - R2_DM LINE R2 -467 3140 2173 7 612 3668 188 31 19 chrUextra 3614127 3615074 -25389582 - SAR_DM Satellite Satellite -268 1204 247 7 612 3423 117 104 107 chrUextra 3615179 3616131 -25388525 - BATUMI_I LTR Pao -6448 1515 567 7 612 2871 12 14 0 chrUextra 3616231 3616577 -25388079 + DMRT1A LINE R1 4833 5183 0 7 612 3792 183 13 16 chrUextra 3617283 3618235 -25386421 + SAR_DM Satellite Satellite 1 949 -216 7 612 2408 174 11 11 chrUextra 3618335 3618876 -25385780 - SAR_DM Satellite Satellite -436 1036 496 7 612 1835 176 2 8 chrUextra 3618891 3619287 -25385369 - SAR_DM Satellite Satellite -569 903 510 7 612 2657 3 0 0 chrUextra 3619387 3619704 -25384952 - QUASIMODO_LTR LTR Gypsy -341 317 1 7 612 519 31 0 0 chrUextra 3619704 3619768 -25384888 - QUASIMODO_I LTR Gypsy 0 6060 5997 7 612 2662 57 2 17 chrUextra 3620439 3620817 -25383839 + STALKER4_LTR LTR Gypsy 62 392 -10 7 612 2229 95 33 17 chrUextra 3620810 3621391 -25383265 - DMSAT6 Satellite Satellite -22 590 1 7 612 22 56 0 0 chrUextra 3621863 3621899 -25382757 + AT_rich Low_complexity Low_complexity 1 36 0 7 612 456 53 0 0 chrUextra 3622546 3622621 -25382035 + PROTOP DNA P 673 747 -3733 7 612 2249 15 0 0 chrUextra 3622636 3622902 -25381754 - Invader2_LTR LTR Gypsy 0 266 1 7 612 3907 34 0 2 chrUextra 3622902 3623401 -25381255 + PROTOP_A DNA P 608 1105 0 7 612 445 97 43 11 chrUextra 3623401 3623495 -25381161 + STALKER4_I LTR Gypsy 6132 6228 -302 7 612 1014 215 100 41 chrUextra 3623597 3624179 -25380477 + SAR_DM Satellite Satellite 1 616 -314 7 612 430 82 0 0 chrUextra 3624215 3624276 -25380380 + FB4_DM DNA Tc1 2 62 -4027 7 612 1047 148 120 19 chrUextra 3624239 3624544 -25380112 - FB4_DM DNA Tc1 -3376 713 384 7 612 2390 113 15 16 chrUextra 3624649 3625599 -25379057 + DMSAT6 Satellite Satellite 1 948 -29 7 612 1013 24 0 0 chrUextra 3625699 3625823 -25378833 + CIRCE LINE Composite 1759 1882 -4474 7 612 518 311 41 41 chrUextra 3625832 3626194 -25378462 + Gypsy12_I LTR Gypsy 3835 4196 -1350 7 612 4233 26 4 27 chrUextra 3625899 3626455 -25378201 + CIRCE LINE Composite 1888 2430 -3926 7 612 1521 32 0 5 chrUextra 3626455 3626645 -25378011 + PROTOP_A DNA P 1 189 -916 7 612 3404 188 37 38 chrUextra 3626753 3627614 -25377042 - TAHRE LINE telomeric -2656 7807 6948 7 612 7971 0 0 2 chrUextra 3627803 3628755 -25375901 + ROVER-I_DM LTR Gypsy 4097 5046 -1538 7 612 34 24 0 0 chrUextra 3629223 3629264 -25375392 + AT_rich Low_complexity Low_complexity 1 41 0 7 612 518 114 48 0 chrUextra 3629283 3629388 -25375268 - TART LINE telomeric -3998 10479 10370 7 612 1143 202 88 52 chrUextra 3629400 3629807 -25374849 - HETA LINE telomeric -406 5675 5254 7 612 2502 94 21 36 chrUextra 3629907 3630857 -25373799 + DMSAT6 Satellite Satellite 1 935 0 7 612 2310 113 7 35 chrUextra 3630959 3631906 -25372750 + DMSAT6 Satellite Satellite 1 920 -29 7 612 6251 45 0 1 chrUextra 3632011 3632857 -25371799 + QUASIMODO_I LTR Gypsy 3408 4252 -1808 7 612 432 119 28 47 chrUextra 3632857 3632963 -25371693 + GTWIN_LTR LTR Gypsy 1 104 -391 7 612 568 317 13 13 chrUextra 3633063 3633293 -25371363 + Gypsy6_I LTR Gypsy 6782 7011 -1 7 612 1771 78 25 67 chrUextra 3633296 3633611 -25371045 + Gypsy6A_LTR LTR Gypsy 1 302 -118 7 612 21 89 0 0 chrUextra 3634553 3634609 -25370047 + AT_rich Low_complexity Low_complexity 1 56 0 7 612 29 47 0 0 chrUextra 3634647 3634690 -25369966 + AT_rich Low_complexity Low_complexity 1 43 0 7 612 27 81 0 0 chrUextra 3634736 3634798 -25369858 + AT_rich Low_complexity Low_complexity 1 62 0 7 612 250 33 0 0 chrUextra 3635222 3635252 -25369404 + Baggins1 LINE LOA 4727 4756 -697 7 612 693 103 241 0 chrUextra 3635260 3635405 -25369251 + FB4_DM DNA Tc1 3908 4087 -2 7 612 3666 188 17 21 chrUextra 3636224 3637168 -25367488 - SAR_DM Satellite Satellite -255 1217 278 7 612 407 69 0 0 chrUextra 3637569 3637627 -25367029 - DNAREP1_DM LINE Penelope -9 585 528 7 612 488 122 16 73 chrUextra 3637631 3637755 -25366901 - DNAREP1_DM LINE Penelope -279 315 199 7 612 1124 112 0 24 chrUextra 3637753 3637995 -25366661 - DNAREP1_DM LINE Penelope -312 282 4 7 612 26 0 0 0 chrUextra 3638060 3638086 -25366570 + AT_rich Low_complexity Low_complexity 1 26 0 7 612 393 234 0 18 chrUextra 3638110 3638219 -25366437 - HOBO DNA hAT 0 3016 2910 7 612 2302 190 45 5 chrUextra 3638324 3639152 -25365504 - SAR_DM Satellite Satellite -532 861 1 7 612 622 121 73 0 chrUextra 3639142 3639266 -25365390 + ARS406_DM Unknown Unknown 50 182 -171 7 612 208 200 31 0 chrUextra 3639377 3639442 -25365214 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 612 22 35 0 0 chrUextra 3639751 3639780 -25364876 + AT_rich Low_complexity Low_complexity 1 29 0 7 612 58 15 0 0 chrUextra 3639955 3640020 -25364636 + AT_rich Low_complexity Low_complexity 1 65 0 7 612 5499 92 79 29 chrUextra 3640421 3641372 -25363284 + Gypsy12_I LTR Gypsy 53 1050 -4496 7 612 295 125 0 0 chrUextra 3641472 3641520 -25363136 - TART LINE telomeric -5267 9210 9163 7 612 2821 189 23 84 chrUextra 3641548 3642420 -25362236 - HETA LINE telomeric -2027 4054 3236 7 612 189 196 0 0 chrUextra 3643028 3643074 -25361582 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 7 612 2374 178 8 8 chrUextra 3644625 3645573 -25359083 + SAR_DM Satellite Satellite 1 948 -478 7 612 3867 7 0 25 chrUextra 3645676 3646146 -25358510 + LSU-rRNA_Dme rRNA rRNA 2192 2649 -1251 7 612 2728 9 0 0 chrUextra 3646148 3646466 -25358190 + R1_DM LINE R1 5039 5356 0 7 612 1412 6 0 0 chrUextra 3646464 3646627 -25358029 + LSU-rRNA_Dme rRNA rRNA 2640 2802 -1098 7 612 4266 10 0 6 chrUextra 3646727 3647234 -25357422 - CIRCE LINE Composite -2337 4019 3516 7 612 419 119 0 0 chrUextra 3647331 3647398 -25357258 - Gypsy8_LTR LTR Gypsy -237 67 1 7 612 1027 86 6 39 chrUextra 3647400 3647581 -25357075 - Invader2_I LTR Gypsy -676 4212 3861 7 612 605 97 0 0 chrUextra 3647585 3647678 -25356978 - Invader2_I LTR Gypsy -799 3793 3701 7 612 979 73 0 0 chrUextra 3647778 3647929 -25356727 - BATUMI_I LTR Pao -510 7453 7303 7 612 3949 40 57 9 chrUextra 3647952 3648501 -25356155 + BATUMI_I LTR Pao 6427 7001 -962 7 612 2017 267 46 20 chrUextra 3647964 3648728 -25355928 - MAX_I LTR Pao -668 7246 6463 7 612 560 15 0 0 chrUextra 3648829 3648896 -25355760 - STALKER4_LTR LTR Gypsy -335 67 1 7 612 7178 25 0 5 chrUextra 3648896 3649775 -25354881 + FW_DM LINE Jockey 3240 4114 -578 7 612 2409 261 22 63 chrUextra 3649882 3650819 -25353837 - Gypsy3_I LTR Gypsy -4009 2168 1270 7 612 2667 21 0 6 chrUextra 3650944 3651272 -25353384 + G_DM LINE Jockey 2653 2978 -1368 7 612 5041 21 0 0 chrUextra 3651268 3651882 -25352774 - G2_DM LINE Jockey -2010 1092 479 7 612 3498 186 14 24 chrUextra 3651984 3652929 -25351727 - SAR_DM Satellite Satellite -879 935 1 7 612 7608 20 28 1 chrUextra 3653033 3653984 -25350672 + R1_DM LINE R1 3511 4487 -869 7 612 306 175 62 12 chrUextra 3655137 3655218 -25349438 - DMTOM1_LTR LTR Gypsy -42 368 284 7 612 254 190 17 0 chrUextra 3655235 3655293 -25349363 - DM176_LTR LTR Gypsy -141 366 308 7 612 248 133 22 0 chrUextra 3655412 3655457 -25349199 - DM176_LTR LTR Gypsy -238 269 224 7 612 894 119 0 0 chrUextra 3655561 3655704 -25348952 - DM176_I LTR Gypsy 0 6420 6278 7 612 1029 151 0 0 chrUextra 3655703 3655895 -25348761 - DM297_I LTR Gypsy -486 5681 5490 7 612 948 114 0 6 chrUextra 3655893 3656070 -25348586 - DM297_I LTR Gypsy -1433 4734 4559 7 612 2115 192 13 9 chrUextra 3656194 3657137 -25347519 - SAR_DM Satellite Satellite -417 946 1 7 612 4519 32 104 1 chrUextra 3657237 3658188 -25346468 - R1_DM LINE R1 -1798 3558 2510 7 612 389 304 35 102 chrUextra 3658589 3659238 -25345418 + HMSBEAGLE_I LTR Gypsy 2322 2927 -3602 7 612 1092 295 7 7 chrUextra 3659339 3659748 -25344908 + MICROPIA_I LTR Gypsy 1418 1838 -2261 7 612 652 306 7 7 chrUextra 3659778 3660048 -25344608 + MICROPIA_I LTR Gypsy 1897 2166 -2310 7 612 836 38 0 0 chrUextra 3660088 3660193 -25344463 + Invader2_LTR LTR Gypsy 162 266 0 7 612 545 12 12 59 chrUextra 3660193 3660278 -25344378 + Invader2_I LTR Gypsy 1 81 -4511 7 612 306 83 21 0 chrUextra 3660390 3660438 -25344218 - Gypsy12_I LTR Gypsy -3995 1551 1503 7 612 1371 86 105 0 chrUextra 3660445 3660655 -25344001 - Gypsy12_I LTR Gypsy -3992 1554 1323 7 612 2998 102 7 50 chrUextra 3660654 3661339 -25343317 - Gypsy12_I LTR Gypsy -4730 816 106 7 612 1600 19 5 0 chrUextra 3661440 3661646 -25343010 + STALKER4_I LTR Gypsy 1135 1341 -5189 7 612 1544 36 20 0 chrUextra 3661646 3661842 -25342814 + BLOOD_LTR LTR Gypsy 1 200 -199 7 612 1604 176 14 88 chrUextra 3661842 3662265 -25342391 + Gypsy3_LTR LTR Gypsy 1 392 -6 7 612 5789 76 34 36 chrUextra 3662490 3663440 -25341216 + TART LINE telomeric 2389 3336 -11141 7 612 2028 13 0 0 chrUextra 3663540 3663778 -25340878 - Invader4_I LTR Gypsy -2175 238 1 7 612 3029 3 0 0 chrUextra 3663778 3664124 -25340532 - Invader4_LTR LTR Gypsy 0 346 1 7 612 455 151 0 41 chrUextra 3664124 3664220 -25340436 + HETA LINE telomeric 3511 3602 -2479 7 612 503 244 110 8 chrUextra 3664253 3664489 -25340167 + HETA LINE telomeric 3832 4091 -1990 7 612 2728 3 6 0 chrUextra 3664590 3664920 -25339736 + IDEFIX_LTR LTR Gypsy 263 594 0 7 612 21 57 0 0 chrUextra 3665060 3665095 -25339561 + AT_rich Low_complexity Low_complexity 1 35 0 7 612 1054 139 69 5 chrUextra 3665136 3665338 -25339318 - DNAREP1_DM LINE Penelope -358 236 22 7 612 5718 73 36 33 chrUextra 3665647 3666590 -25338066 - TART LINE telomeric -11115 3362 2417 7 612 546 42 0 0 chrUextra 3666690 3666761 -25337895 + ARS406_DM Unknown Unknown 119 189 -164 7 612 3648 195 15 21 chrUextra 3666698 3667640 -25337016 - SAR_DM Satellite Satellite -242 1230 295 7 612 2896 173 10 5 chrUextra 3667743 3668687 -25335969 - SAR_DM Satellite Satellite -635 948 1 7 612 3442 182 40 25 chrUextra 3668790 3669739 -25334917 - SAR_DM Satellite Satellite -445 1027 65 7 76 2602 42 0 61 chrUextra 3669922 3670300 -25334356 + DIVER2_I LTR Pao 1223 1577 -2570 7 613 1250 32 311 0 chrUextra 3670296 3670605 -25334051 + DIVER2_I LTR Pao 3743 4147 0 7 613 1142 55 74 0 chrUextra 3670605 3670768 -25333888 + DIVER2_LTR LTR Pao 1 175 -210 7 613 7315 17 22 7 chrUextra 3670890 3671840 -25332816 - STALKER4_I LTR Gypsy -4296 2234 1271 7 613 3306 112 27 24 chrUextra 3671940 3672890 -25331766 + TART LINE telomeric 8037 8920 -5557 7 613 3201 125 74 14 chrUextra 3674063 3674615 -25330041 + HMSBEAGLE_I LTR Gypsy 4194 4778 -1751 7 613 279 103 35 0 chrUextra 3674616 3674674 -25329982 - DNAREP1_DM LINE Penelope -453 141 82 7 613 1990 107 48 0 chrUextra 3674680 3674990 -25329666 + HMSBEAGLE_I LTR Gypsy 4746 5070 -1459 7 613 4597 14 11 0 chrUextra 3675090 3675648 -25329008 - M4DM DNA Transib -871 564 1 7 613 889 96 0 0 chrUextra 3675648 3675794 -25328862 - QUASIMODO_LTR LTR Gypsy -480 178 33 7 613 828 255 21 4 chrUextra 3675791 3676027 -25328629 + ROVER-I_DM LTR Gypsy 1056 1295 -5289 7 613 277 345 0 0 chrUextra 3676324 3676489 -25328167 + (CAGT)n Simple_repeat Simple_repeat 4 168 0 7 613 201 257 0 0 chrUextra 3676799 3676908 -25327748 + (CAGT)n Simple_repeat Simple_repeat 2 110 0 7 613 279 125 236 0 chrUextra 3676945 3677089 -25327567 + (TTTAG)n Simple_repeat Simple_repeat 1 178 0 7 613 361 147 136 9 chrUextra 3677209 3677319 -25327337 + Gypsy12_LTR LTR Gypsy 1413 1536 -800 7 613 2373 107 2 52 chrUextra 3677320 3677726 -25326930 + Gypsy12_LTR LTR Gypsy 1951 2336 0 7 613 459 143 0 0 chrUextra 3677728 3677805 -25326851 + Gypsy2_I LTR Gypsy 1088 1164 -4971 7 613 2237 73 0 26 chrUextra 3677828 3678139 -25326517 + Gypsy12_I LTR Gypsy 4621 4923 -623 7 613 7370 37 0 22 chrUextra 3678240 3679190 -25325466 + BATUMI_I LTR Pao 5271 6199 -1764 7 613 8129 15 0 1 chrUextra 3679290 3680240 -25324416 + R2_DM LINE R2 1048 1996 -1611 7 613 3785 11 0 0 chrUextra 3680356 3680806 -25323850 + DM176_LTR LTR Gypsy 58 507 0 7 613 3401 52 0 0 chrUextra 3680808 3681290 -25323366 + MDG1_I LTR Gypsy 5755 6236 -360 7 613 477 81 207 0 chrUextra 3681627 3681714 -25322942 + DNAREP1_DM LINE Penelope 426 530 -64 7 613 2505 107 11 14 chrUextra 3682439 3683388 -25321268 - DMSAT6 Satellite Satellite -41 945 1 7 613 7858 29 0 0 chrUextra 3683488 3684437 -25320219 - DIVER_I LTR Pao -2415 3228 2280 7 613 5417 24 9 16 chrUextra 3684537 3685222 -25319434 - DIVER2_I LTR Pao -1301 2846 2167 7 613 1153 28 7 0 chrUextra 3685222 3685367 -25319289 - DIVER2_I LTR Pao -2097 2050 1905 7 613 928 50 0 0 chrUextra 3685367 3685486 -25319170 - DIVER2_I LTR Pao -2404 1743 1625 7 613 3155 31 0 0 chrUextra 3686635 3687020 -25317636 - BATUMI_I LTR Pao -3217 4746 4362 7 613 4358 44 2 0 chrUextra 3687035 3687584 -25317072 - BATUMI_I LTR Pao -3817 4146 3597 7 613 3020 14 0 3 chrUextra 3687684 3688048 -25316608 + STALKER4_LTR LTR Gypsy 40 402 0 7 613 2927 86 81 32 chrUextra 3688067 3688633 -25316023 + STALKER4_I LTR Gypsy 833 1426 -5104 7 613 2395 93 27 37 chrUextra 3688733 3689682 -25314974 + DMSAT6 Satellite Satellite 1 939 -28 7 613 2196 253 22 53 chrUextra 3689785 3690731 -25313925 - Stalker2_I LTR Gypsy -3218 4184 3268 7 613 1967 80 63 97 chrUextra 3690833 3691278 -25313378 - BATUMI_I LTR Pao -6785 1178 749 7 613 290 53 16 81 chrUextra 3691319 3691381 -25313275 - BATUMI_I LTR Pao -7194 769 712 7 613 355 49 49 0 chrUextra 3691383 3691444 -25313212 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 7 613 2599 12 54 0 chrUextra 3691445 3691780 -25312876 + IDEFIX_LTR LTR Gypsy 1 353 -241 7 613 4024 6 0 0 chrUextra 3691880 3692350 -25312306 - R2_DM LINE R2 -2497 1110 641 7 613 4175 2 0 0 chrUextra 3692348 3692829 -25311827 - LSU-rRNA_Dme rRNA rRNA -1320 2580 2100 7 613 2194 118 13 35 chrUextra 3692938 3693402 -25311254 + DMSAT6 Satellite Satellite 17 470 0 7 613 2322 117 18 9 chrUextra 3693430 3693878 -25310778 + DMSAT6 Satellite Satellite 1 452 -18 7 613 1221 165 4 12 chrUextra 3693984 3694229 -25310427 - HETA LINE telomeric -1726 4355 4113 7 613 426 174 18 0 chrUextra 3694229 3694338 -25310318 - TAHRE LINE telomeric -3044 7419 7309 7 613 3131 144 10 12 chrUextra 3694344 3694927 -25309729 - TAHRE LINE telomeric -9 10454 9873 7 613 891 43 0 0 chrUextra 3695029 3695146 -25309510 + ARS406_DM Unknown Unknown 73 189 -164 7 613 3504 184 28 24 chrUextra 3695055 3695976 -25308680 - SAR_DM Satellite Satellite -216 1256 332 7 613 899 82 6 19 chrUextra 3696141 3697025 -25307631 - RSP Satellite Satellite 0 872 1 7 613 3739 23 50 0 chrUextra 3697125 3697604 -25307052 - PROTOP_A DNA P -602 503 1 7 613 2919 98 13 2 chrUextra 3697604 3698074 -25306582 + TART LINE telomeric 715 1189 -13288 7 613 687 179 6 50 chrUextra 3698252 3698411 -25306245 - HETRP_DM Satellite Satellite -203 1669 1518 7 613 668 179 7 14 chrUextra 3698555 3698697 -25305959 - HETRP_DM Satellite Satellite -203 1669 1529 7 613 668 179 7 14 chrUextra 3698837 3698979 -25305677 - HETRP_DM Satellite Satellite -203 1669 1529 7 613 7346 13 120 0 chrUextra 3699223 3700172 -25304484 - DOC2_DM LINE Jockey -920 3873 2811 7 613 3141 0 0 0 chrUextra 3700272 3700637 -25304019 - ACCORD_LTR LTR Gypsy -193 365 1 7 613 4999 3 0 0 chrUextra 3700637 3701221 -25303435 + Invader2_I LTR Gypsy 620 1203 -3389 7 613 193 91 0 64 chrUextra 3701369 3701416 -25303240 + T-rich Low_complexity Low_complexity 4 47 0 7 613 3675 180 15 9 chrUextra 3701416 3702264 -25302392 - SAR_DM Satellite Satellite -425 1047 195 7 613 842 10 10 0 chrUextra 3702370 3702472 -25302184 + LSU-rRNA_Dme rRNA rRNA 2481 2583 -1317 7 613 1850 4 17 13 chrUextra 3702512 3702751 -25301905 + NTS_DM Other Other 1 240 0 7 613 530 0 0 0 chrUextra 3702751 3702811 -25301845 + NTS_DM Other Other 1 60 -180 7 613 4458 2 0 0 chrUextra 3702809 3703318 -25301338 + R2_DM LINE R2 2081 2589 -1018 7 613 2444 94 32 38 chrUextra 3703418 3704365 -25300291 + DMSAT6 Satellite Satellite 1 940 -130 7 613 4512 58 40 0 chrUextra 3704466 3705072 -25299584 + TART_B1 LINE telomeric 2991 3620 -7034 7 613 2806 26 0 0 chrUextra 3705072 3705414 -25299242 + PROTOP_A DNA P 1 342 -763 7 613 4736 17 2 30 chrUextra 3706562 3707161 -25297495 - Gypsy12_LTR LTR Gypsy -1754 582 1 7 613 2386 43 3 5 chrUextra 3707161 3707486 -25297170 - Gypsy6A_LTR LTR Gypsy -12 408 1 7 613 1985 169 47 28 chrUextra 3708094 3708558 -25296098 + STALKER4_I LTR Gypsy 1044 1516 -5014 7 613 2223 95 25 30 chrUextra 3708658 3709604 -25295052 - DMSAT6 Satellite Satellite -48 941 1 7 613 3150 209 49 12 chrUextra 3709706 3710647 -25294009 + SAR_DM Satellite Satellite 242 1217 -255 7 613 3630 211 33 20 chrUextra 3710757 3712750 -25291906 - SAR_DM Satellite Satellite -300 2018 1 7 613 998 187 35 17 chrUextra 3712868 3713784 -25290872 + SAR_DM Satellite Satellite 1 932 -680 7 613 7464 35 5 2 chrUextra 3713898 3714846 -25289810 + MDG1_I LTR Gypsy 1526 2476 -4120 7 613 3838 11 2 4 chrUextra 3714946 3715422 -25289234 + DOC LINE Jockey 4251 4725 0 7 613 2417 146 13 4 chrUextra 3715425 3715894 -25288762 - SAR_DM Satellite Satellite -627 845 373 7 613 2979 202 37 25 chrUextra 3716007 3716942 -25287714 + TART LINE telomeric 8037 9261 -1202 7 613 2378 17 0 0 chrUextra 3717042 3717333 -25287323 + FW_DM LINE Jockey 4392 4682 -10 7 613 1094 139 64 5 chrUextra 3717695 3717898 -25286758 + DNAREP1_DM LINE Penelope 22 236 -358 7 613 21 57 0 0 chrUextra 3717939 3717974 -25286682 + AT_rich Low_complexity Low_complexity 1 35 0 7 613 221 208 38 0 chrUextra 3718688 3718741 -25285915 + (CATA)n Simple_repeat Simple_repeat 1 55 0 7 613 7594 18 42 0 chrUextra 3719138 3720086 -25284570 - DMRT1B LINE R1 -2146 3037 2050 7 613 1180 0 0 0 chrUextra 3720186 3720321 -25284335 + Copia_I LTR Copia 4459 4593 0 7 613 2148 18 7 0 chrUextra 3720321 3720595 -25284061 + Copia_LTR LTR Copia 1 276 0 7 613 1266 60 0 0 chrUextra 3720596 3720764 -25283892 - ROO_I LTR Pao -2657 5599 5432 7 613 2892 21 75 0 chrUextra 3720746 3721134 -25283522 - ROO_I LTR Pao -2970 5286 4870 7 613 3605 189 16 20 chrUextra 3721237 3722177 -25282479 + SAR_DM Satellite Satellite 282 1217 -255 7 613 900 49 16 0 chrUextra 3722283 3722405 -25282251 + DMCR1A LINE CR1 1522 1645 -2825 7 613 6569 14 2 13 chrUextra 3722405 3723230 -25281426 + PROTOP_A DNA P 1 816 -289 7 613 316 318 0 8 chrUextra 3723756 3723886 -25280770 - BLASTOPIA_I LTR Gypsy -775 3706 3578 7 613 2918 206 35 11 chrUextra 3724378 3725326 -25279330 - SAR_DM Satellite Satellite -506 971 1 7 613 3529 194 14 21 chrUextra 3725441 3726373 -25278283 + SAR_DM Satellite Satellite 332 1256 -216 7 613 4755 18 1 8 chrUextra 3726474 3727422 -25277234 - Copia_I LTR Copia -1699 2894 2054 7 613 3086 132 30 5 chrUextra 3727522 3728084 -25276572 - Stalker2_I LTR Gypsy -6585 817 242 7 613 291 49 0 0 chrUextra 3728282 3728323 -25276333 - Stalker2_I LTR Gypsy -7361 41 1 7 613 1182 20 0 7 chrUextra 3728323 3728470 -25276186 - Stalker3_LTR LTR Gypsy 0 372 227 7 613 3389 20 0 0 chrUextra 3728570 3728979 -25275677 - Gypsy4_I LTR Gypsy -5506 782 374 7 613 47 0 0 0 chrUextra 3729437 3729484 -25275172 + AT_rich Low_complexity Low_complexity 1 47 0 7 613 739 21 0 0 chrUextra 3729618 3729712 -25274944 - PROTOP_B DNA P -570 583 490 7 613 337 170 93 9 chrUextra 3730079 3730186 -25274470 + TAHRE LINE telomeric 7309 7424 -3039 7 613 645 214 6 54 chrUextra 3730190 3730358 -25274298 + HETA LINE telomeric 4152 4311 -1770 7 613 4867 56 55 8 chrUextra 3732760 3733707 -25270949 + PROTOP DNA P 7 863 -242 7 613 3325 206 16 19 chrUextra 3733807 3734741 -25269915 + SAR_DM Satellite Satellite 334 1264 -208 7 613 793 55 9 0 chrUextra 3734644 3734754 -25269902 - ARS406_DM Unknown Unknown -164 189 79 7 613 3777 22 22 15 chrUextra 3734854 3735141 -25269515 - DM176_I LTR Gypsy -5595 825 531 7 613 181 30 29 57 chrUextra 3735141 3735176 -25269480 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 613 3777 63 63 37 chrUextra 3735176 3735627 -25269029 - DM176_I LTR Gypsy -5890 530 1 7 613 467 128 142 74 chrUextra 3735627 3735801 -25268855 - DM176_LTR LTR Gypsy -27 480 230 7 613 260 56 0 0 chrUextra 3735901 3735937 -25268719 + HMSBEAGLE_I LTR Gypsy 2366 2401 -4128 7 613 1714 108 16 60 chrUextra 3735988 3736304 -25268352 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 613 1477 198 105 0 chrUextra 3736365 3736709 -25267947 + HMSBEAGLE_I LTR Gypsy 2422 2801 -3728 7 613 670 221 0 0 chrUextra 3736708 3736848 -25267808 + HMSBEAGLE_I LTR Gypsy 3155 3294 -3235 7 613 7436 40 1 1 chrUextra 3736948 3737895 -25266761 + R1_DM LINE R1 972 1918 -3438 7 613 983 8 0 0 chrUextra 3737995 3738115 -25266541 - Copia_I LTR Copia -4473 120 1 7 613 2297 0 0 0 chrUextra 3738115 3738391 -25266265 - Copia_LTR LTR Copia 0 276 1 7 613 4680 11 5 0 chrUextra 3738391 3738942 -25265714 + QUASIMODO_I LTR Gypsy 1801 2354 -3706 7 613 646 39 0 0 chrUextra 3739042 3739145 -25265511 + FW_DM LINE Jockey 4590 4692 0 7 613 2229 107 35 25 chrUextra 3739146 3739989 -25264667 - DMSAT6 Satellite Satellite -105 851 1 7 613 316 265 0 0 chrUextra 3740321 3740419 -25264237 - DIVER2_I LTR Pao -1621 2526 2429 7 613 4354 14 0 69 chrUextra 3741136 3741727 -25262929 - QUASIMODO_I LTR Gypsy -5510 550 1 7 613 2837 3 3 17 chrUextra 3741727 3742083 -25262573 - QUASIMODO_LTR LTR Gypsy 0 658 308 7 613 2294 165 4 6 chrUextra 3742183 3742658 -25261998 + SAR_DM Satellite Satellite 430 903 -569 7 613 1928 193 2 5 chrUextra 3742673 3743116 -25261540 + SAR_DM Satellite Satellite 496 937 -535 7 613 989 51 0 0 chrUextra 3742993 3743130 -25261526 - ARS406_DM Unknown Unknown -164 189 53 7 613 25 48 0 46 chrUextra 3743696 3743761 -25260895 + AT_rich Low_complexity Low_complexity 1 62 0 7 613 824 307 75 13 chrUextra 3744623 3745154 -25259502 + Copia_I LTR Copia 1716 2279 -2314 7 613 2316 115 25 19 chrUextra 3745324 3746271 -25258385 + DMSAT6 Satellite Satellite 1 953 -228 7 613 519 90 0 196 chrUextra 3746446 3746584 -25258072 - DNAREP1_DM LINE Penelope -9 585 475 7 613 6804 18 37 1 chrUextra 3748465 3749309 -25255347 - DMRT1B LINE R1 -4309 874 1 7 613 7244 42 6 2 chrUextra 3749512 3750459 -25254197 - R1_DM LINE R1 -3780 1576 626 7 613 2615 22 0 0 chrUextra 3750559 3750872 -25253784 - CIRCE LINE Composite -6043 313 1 7 613 5075 24 36 0 chrUextra 3750872 3751506 -25253150 - CIRCE LINE Composite 0 6356 5700 7 613 3284 210 25 10 chrUextra 3751622 3752546 -25252110 + SAR_DM Satellite Satellite 332 1269 -203 7 613 3509 68 0 4 chrUextra 3753700 3754186 -25250470 + HOBO DNA hAT 467 950 -2066 7 613 533 64 13 0 chrUextra 3754187 3754265 -25250391 + HOBO DNA hAT 1100 1178 -1838 7 613 917 151 0 0 chrUextra 3754272 3754431 -25250225 + HOBO DNA hAT 1478 1636 -1380 7 613 423 203 39 71 chrUextra 3754439 3754593 -25250063 + HOBO DNA hAT 1753 1901 -1115 7 613 244 170 0 0 chrUextra 3754600 3754647 -25250009 + HOBO DNA hAT 2088 2134 -882 7 613 2897 129 12 16 chrUextra 3754747 3755258 -25249398 + TAHRE LINE telomeric 9945 10453 -10 7 613 3603 15 0 0 chrUextra 3755240 3755694 -25248962 + TAHRE LINE telomeric 2782 3235 -7228 7 613 1987 110 13 29 chrUextra 3755794 3756170 -25248486 + TAHRE LINE telomeric 10093 10462 -1 7 613 3369 73 6 20 chrUextra 3756153 3756741 -25247915 + HETA LINE telomeric 1 608 -5473 7 613 3637 190 24 19 chrUextra 3756841 3757787 -25246869 + SAR_DM Satellite Satellite 257 1207 -265 7 613 3114 80 2 11 chrUextra 3757887 3758331 -25246325 + R1_DM LINE R1 1666 2105 -3251 7 613 239 232 61 0 chrUextra 3758345 3758444 -25246212 + R1_DM LINE R1 606 710 -4646 7 613 2496 133 5 7 chrUextra 3758420 3758833 -25245823 + R1_DM LINE R1 1108 1498 -3858 7 613 1084 261 25 49 chrUextra 3758969 3759457 -25245199 + FROGGER_I LTR Copia 1562 2037 -40 7 613 623 205 97 0 chrUextra 3759694 3759879 -25244777 - SAR_DM Satellite Satellite -627 845 643 7 613 6082 101 48 9 chrUextra 3759979 3760925 -25243731 - Gypsy12_I LTR Gypsy -3320 2226 1245 7 613 5597 14 21 0 chrUextra 3761305 3761971 -25242685 - SSU-rRNA_Dme rRNA rRNA 0 1995 1316 7 613 938 167 63 10 chrUextra 3762071 3762343 -25242313 + ARS406_DM Unknown Unknown 22 360 0 7 613 3233 168 15 22 chrUextra 3762257 3763013 -25241643 - SAR_DM Satellite Satellite -354 1118 369 7 613 23 68 0 0 chrUextra 3763776 3763820 -25240836 + AT_rich Low_complexity Low_complexity 1 44 0 7 613 26 30 0 0 chrUextra 3763866 3763899 -25240757 + AT_rich Low_complexity Low_complexity 1 33 0 7 613 2433 106 22 4 chrUextra 3764166 3765108 -25239548 + DMSAT6 Satellite Satellite 1 959 -108 7 613 7845 4 12 0 chrUextra 3765209 3766155 -25238501 - DM176_I LTR Gypsy -1315 5105 4149 7 613 7655 20 24 1 chrUextra 3766255 3767201 -25237455 - R1_DM LINE R1 -1373 3983 3016 7 613 7285 44 11 1 chrUextra 3767301 3768247 -25236409 - R1_DM LINE R1 -3668 1688 734 7 613 3138 24 0 0 chrUextra 3768347 3768725 -25235931 + LSU-rRNA_Dme rRNA rRNA 3523 3900 0 7 613 2313 110 18 19 chrUextra 3768836 3769293 -25235363 + G2_DM LINE Jockey 4 305 -2797 7 613 7029 52 0 14 chrUextra 3769393 3770339 -25234317 + DMCR1A LINE CR1 2609 3541 -929 7 613 637 112 8 8 chrUextra 3771485 3771602 -25233054 - ARS406_DM Unknown Unknown -236 117 1 7 613 3901 170 12 22 chrUextra 3771509 3772431 -25232225 + SAR_DM Satellite Satellite 195 1107 -365 7 613 4091 47 109 41 chrUextra 3772531 3773475 -25231181 + BATUMI_I LTR Pao 2329 3336 -4627 7 613 3636 194 19 17 chrUextra 3773577 3774519 -25230137 + SAR_DM Satellite Satellite 287 1230 -242 7 613 1716 103 37 34 chrUextra 3774654 3774975 -25229681 - ROVER-LTR_DM LTR Gypsy 0 367 46 7 613 21 57 0 0 chrUextra 3775328 3775363 -25229293 + AT_rich Low_complexity Low_complexity 1 35 0 7 613 2679 182 7 7 chrUextra 3775669 3776615 -25228041 - SAR_DM Satellite Satellite -649 946 1 7 613 379 65 242 0 chrUextra 3776715 3776777 -25227879 - PROTOP_B DNA P -1076 77 1 7 613 3391 36 131 0 chrUextra 3777761 3778601 -25226055 + DOC3_DM LINE Jockey 3547 4496 -244 7 613 691 56 37 0 chrUextra 3778598 3778705 -25225951 + DOC3_DM LINE Jockey 4630 4740 0 7 613 2341 141 50 31 chrUextra 3778998 3779751 -25224905 + Stalker2_I LTR Gypsy 291 1173 -5357 7 613 800 33 7 160 chrUextra 3779852 3779996 -25224660 + DIVER2_I LTR Pao 1454 1575 -2572 7 613 3398 52 9 0 chrUextra 3779973 3780398 -25224258 + DIVER2_I LTR Pao 3719 4147 0 7 613 971 27 0 0 chrUextra 3780398 3780509 -25224147 + DIVER2_LTR LTR Pao 1 111 -274 7 613 1140 42 7 0 chrUextra 3780522 3780665 -25223991 + DIVER2_LTR LTR Pao 242 385 0 7 613 3474 26 106 4 chrUextra 3781014 3781842 -25222814 + BLOOD_I LTR Gypsy 32 944 -5669 7 613 470 281 129 29 chrUextra 3782248 3782817 -25221839 + Gypsy4_I LTR Gypsy 3237 3538 -2883 7 613 6643 54 6 45 chrUextra 3782999 3783932 -25220724 + HETA LINE telomeric 587 1483 -4598 7 613 7986 36 8 0 chrUextra 3784032 3784977 -25219679 - R1_DM LINE R1 -3247 2109 1157 7 613 2584 102 32 6 chrUextra 3785077 3786006 -25218650 + DMSAT6 Satellite Satellite 1 953 -29 7 613 3127 0 3 0 chrUextra 3786122 3786476 -25218180 - MICROPIA_I LTR Gypsy -239 4237 3883 7 613 5426 15 5 0 chrUextra 3786451 3787067 -25217589 - MICROPIA_I LTR Gypsy -1043 3433 2815 7 613 3779 186 20 25 chrUextra 3787170 3788098 -25216558 + SAR_DM Satellite Satellite 346 1269 -203 7 613 855 77 0 0 chrUextra 3787995 3788112 -25216544 - ARS406_DM Unknown Unknown -164 189 73 7 613 435 0 0 0 chrUextra 3788212 3788260 -25216396 + SSU-rRNA_Dme rRNA rRNA 1948 1995 0 7 613 21 89 0 0 chrUextra 3788279 3788335 -25216321 + AT_rich Low_complexity Low_complexity 1 56 0 7 613 245 231 0 19 chrUextra 3790093 3790146 -25214510 + Gypsy_I LTR Gypsy 2605 2656 -3851 7 613 929 346 28 55 chrUextra 3790320 3791247 -25213409 + MICROPIA_I LTR Gypsy 176 1077 -3399 7 613 6567 39 17 74 chrUextra 3791349 3792290 -25212366 + Gypsy6_I LTR Gypsy 1 887 -6125 7 613 1502 249 19 21 chrUextra 3792392 3792814 -25211842 + TOM_I LTR Gypsy 4896 5316 -796 7 613 3845 66 46 6 chrUextra 3792812 3793333 -25211323 + DMCR1A LINE CR1 3457 3998 -472 7 613 5972 13 4 4 chrUextra 3793437 3794146 -25210510 + PROTOP_A DNA P 397 1105 0 7 613 1298 124 0 28 chrUextra 3794146 3794360 -25210296 - TART LINE telomeric -10587 3890 3683 7 613 2731 187 25 6 chrUextra 3794484 3795124 -25209532 - SAR_DM Satellite Satellite -448 1024 373 7 613 790 170 22 4 chrUextra 3795147 3795427 -25209229 - SAR_DM Satellite Satellite -630 285 1 7 613 808 74 0 0 chrUextra 3795530 3795650 -25209006 + TART_B1 LINE telomeric 2286 2405 -8249 7 613 236 32 0 0 chrUextra 3795650 3795681 -25208975 + PROTOP_A DNA P 1 31 -1074 7 613 3184 19 0 38 chrUextra 3795679 3796072 -25208584 + PROTOP_A DNA P 728 1105 0 7 613 2729 91 35 5 chrUextra 3796072 3796469 -25208187 + TART_B1 LINE telomeric 2399 2807 -7847 7 613 1158 125 0 2 chrUextra 3796573 3797094 -25207562 + (TA)n Simple_repeat Simple_repeat 1 519 0 7 613 700 97 64 13 chrUextra 3798230 3798251 -25206405 + polypyrimidine Low_complexity Low_complexity 148 169 0 7 613 984 86 28 11 chrUextra 3798251 3798427 -25206229 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 7 613 700 97 64 13 chrUextra 3798427 3798562 -25206094 + CT-rich Low_complexity Low_complexity 5 147 0 7 613 3781 181 27 16 chrUextra 3798664 3799606 -25205050 + SAR_DM Satellite Satellite 1 951 -203 7 613 6831 104 0 1 chrUextra 3799708 3800650 -25204006 - GTWIN_I LTR Gypsy -1525 4896 3956 7 613 4235 15 130 0 chrUextra 3800750 3801026 -25203630 + TART LINE telomeric 7440 7722 -6755 7 76 549 55 0 0 chrUextra 3801026 3801099 -25203557 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 7 614 4235 15 130 0 chrUextra 3801099 3801351 -25203305 + TART LINE telomeric 7723 8035 -6442 7 614 2118 111 103 3 chrUextra 3801343 3801694 -25202962 + TART LINE telomeric 6742 7127 -7350 7 614 314 116 26 115 chrUextra 3802143 3802221 -25202435 + TIRANT_I LTR Gypsy 1 71 -7621 7 614 1642 158 17 23 chrUextra 3802853 3803152 -25201504 - Gypsy12_LTR LTR Gypsy -2039 297 1 7 614 4522 79 78 14 chrUextra 3803152 3803781 -25200875 - Gypsy12_I LTR Gypsy 0 5546 4878 7 614 2751 0 6 3 chrUextra 3803882 3804197 -25200459 + LSU-rRNA_Dme rRNA rRNA 1473 1788 -2112 7 614 4449 55 2 8 chrUextra 3804241 3804826 -25199830 + LSU-rRNA_Dme rRNA rRNA 1788 2368 -1532 7 614 24 32 0 0 chrUextra 3805312 3805343 -25199313 + AT_rich Low_complexity Low_complexity 1 31 0 7 614 8281 8 16 2 chrUextra 3805970 3806914 -25197742 + SSU-rRNA_Dme rRNA rRNA 459 1415 -580 7 614 6940 72 9 0 chrUextra 3807014 3807958 -25196698 - STALKER4_I LTR Gypsy -387 6143 5191 7 614 2771 9 6 9 chrUextra 3808058 3808388 -25196268 + DM297_LTR LTR Gypsy 86 414 0 7 614 5026 13 0 0 chrUextra 3808398 3809002 -25195654 + DM297_I LTR Gypsy 4276 4879 -1288 7 614 1587 38 0 2 chrUextra 3810173 3810672 -25193984 + (ATAAG)n Simple_repeat Simple_repeat 1 498 0 7 614 4927 197 0 6 chrUextra 3811191 3812127 -25192529 - ROVER-I_DM LTR Gypsy -3331 3253 2324 7 614 2895 200 39 16 chrUextra 3812234 3813178 -25191478 - SAR_DM Satellite Satellite -399 965 1 7 614 2474 97 0 11 chrUextra 3813278 3813642 -25191014 + HETA LINE telomeric 2664 3023 -3058 7 614 2283 112 315 7 chrUextra 3813662 3814221 -25190435 + TART LINE telomeric 9549 10279 -4198 7 614 3933 41 78 0 chrUextra 3814755 3815266 -25189390 + PROTOP DNA P 1 551 -3929 7 614 1852 263 27 41 chrUextra 3816412 3816521 -25188135 + SAR_DM Satellite Satellite 1 492 -766 7 614 2611 64 6 0 chrUextra 3816521 3816880 -25187776 - XDMR Unknown Unknown 0 361 1 7 614 2569 70 3 3 chrUextra 3816880 3817241 -25187415 - XDMR Unknown Unknown 0 361 1 7 614 1852 263 27 41 chrUextra 3817241 3817330 -25187326 + SAR_DM Satellite Satellite 493 905 -353 7 614 1597 6 0 0 chrUextra 3817454 3817631 -25187025 + DMRT1B LINE R1 5007 5183 0 7 614 647 210 76 10 chrUextra 3817678 3817875 -25186781 - Copia_I LTR Copia -932 3661 3452 7 614 806 28 0 0 chrUextra 3819087 3819194 -25185462 + TLD2 Unknown Unknown 112 218 0 7 614 377 297 32 32 chrUextra 3819122 3819341 -25185315 + DM176_I LTR Gypsy 3027 3245 -3175 7 614 38 61 0 0 chrUextra 3819928 3819994 -25184662 + AT_rich Low_complexity Low_complexity 1 66 0 7 614 422 128 139 13 chrUextra 3820005 3820084 -25184572 - DNAREP1_DM LINE Penelope -110 484 396 7 614 2373 98 10 8 chrUextra 3820084 3820485 -25184171 + S_DM DNA Tc1 91 492 -1244 7 614 21 36 0 0 chrUextra 3820905 3820933 -25183723 + AT_rich Low_complexity Low_complexity 1 28 0 7 614 35 0 0 0 chrUextra 3822196 3822231 -25182425 + AT_rich Low_complexity Low_complexity 1 35 0 7 614 1203 158 142 6 chrUextra 3822249 3822574 -25182082 - Gypsy5_I LTR Gypsy -1239 5270 4902 7 614 2929 31 42 0 chrUextra 3823265 3823618 -25181038 + PROTOP DNA P 1 368 -4112 7 614 704 65 0 0 chrUextra 3823718 3823811 -25180845 + TAHRE LINE telomeric 10361 10453 -10 7 614 3335 139 28 88 chrUextra 3823810 3824657 -25179999 + HETA LINE telomeric 190 985 -5096 7 614 318 219 77 77 chrUextra 3824789 3824893 -25179763 - MICROPIA_I LTR Gypsy -4372 104 1 7 614 260 344 31 20 chrUextra 3824920 3825116 -25179540 - ACCORD2_I LTR Gypsy -6457 755 558 7 614 3318 8 0 11 chrUextra 3825804 3826181 -25178475 + MICROPIA_I LTR Gypsy 3007 3379 -1097 7 614 4961 7 2 0 chrUextra 3826178 3826747 -25177909 + MICROPIA_I LTR Gypsy 3886 4455 -21 7 614 4261 0 0 0 chrUextra 3827890 3828373 -25176283 + DOC LINE Jockey 4243 4725 0 7 614 32 0 0 0 chrUextra 3828518 3828550 -25176106 + AT_rich Low_complexity Low_complexity 1 32 0 7 614 1341 13 0 0 chrUextra 3828682 3828833 -25175823 + SSU-rRNA_Dme rRNA rRNA 1 151 -1844 7 614 1973 0 9 21 chrUextra 3828936 3829169 -25175487 + DM1731_I LTR Copia 3747 3976 0 7 614 2788 39 0 0 chrUextra 3829169 3829505 -25175151 + DM1731_LTR LTR Copia 1 336 0 7 614 22 35 0 0 chrUextra 3829700 3829729 -25174927 + AT_rich Low_complexity Low_complexity 1 29 0 7 614 3820 172 18 37 chrUextra 3829988 3830876 -25173780 - SAR_DM Satellite Satellite -411 1061 191 7 614 654 171 8 0 chrUextra 3830788 3830917 -25173739 + ARS406_DM Unknown Unknown 10 139 -214 7 614 1512 38 0 3 chrUextra 3831019 3831365 -25173291 + (TATAA)n Simple_repeat Simple_repeat 1 344 0 7 614 2038 43 3 34 chrUextra 3831365 3831657 -25172999 + BATUMI_I LTR Pao 7002 7284 -679 7 614 1025 76 7 7 chrUextra 3831657 3831803 -25172853 + BATUMI_I LTR Pao 1 146 -7817 7 614 895 87 28 21 chrUextra 3831821 3831962 -25172694 + BATUMI_I LTR Pao 292 433 -7530 7 614 21 89 0 0 chrUextra 3832353 3832409 -25172247 + AT_rich Low_complexity Low_complexity 1 56 0 7 614 23 68 0 0 chrUextra 3832447 3832491 -25172165 + AT_rich Low_complexity Low_complexity 1 44 0 7 614 575 30 0 0 chrUextra 3832938 3833005 -25171651 - PROTOP_A DNA P -1 1104 1037 7 614 2487 181 57 12 chrUextra 3833105 3834047 -25170609 + SAR_DM Satellite Satellite 1 983 -208 7 614 7718 14 15 0 chrUextra 3834148 3835091 -25169565 + STALKER4_I LTR Gypsy 2113 3069 -3461 7 614 5509 22 46 0 chrUextra 3835193 3836134 -25168522 - FW_DM LINE Jockey -639 4053 3070 7 614 7222 18 30 12 chrUextra 3836234 3837177 -25167479 + ROO_I LTR Pao 2869 3828 -4428 7 614 7806 8 10 1 chrUextra 3837290 3838220 -25166436 + Invader3_I LTR Gypsy 1 938 -3950 7 614 7790 26 5 0 chrUextra 3838320 3839263 -25165393 - DIVER2_I LTR Pao -160 3987 3040 7 614 1923 175 95 69 chrUextra 3839364 3839973 -25164683 - HETA LINE telomeric -778 5303 4679 7 614 859 202 7 90 chrUextra 3840029 3840306 -25164350 - TAHRE LINE telomeric -3081 7382 7129 7 614 46 0 0 0 chrUextra 3840805 3840851 -25163805 + AT_rich Low_complexity Low_complexity 1 46 0 7 614 2545 131 11 15 chrUextra 3840885 3841341 -25163315 + DOC LINE Jockey 4147 4600 -125 7 614 592 273 29 0 chrUextra 3841449 3841621 -25163035 - HELENA_RT LINE Jockey -928 389 213 7 614 1731 312 6 0 chrUextra 3841652 3842316 -25162340 - BS LINE Jockey -3465 1661 994 7 614 4347 19 0 4 chrUextra 3842494 3843037 -25161619 - PROTOP_A DNA P -453 652 112 7 614 2134 88 18 2 chrUextra 3843032 3843420 -25161236 - TART LINE telomeric -6799 7678 7396 7 614 7489 16 43 6 chrUextra 3843537 3844474 -25160182 + FW_DM LINE Jockey 1842 2812 -1880 7 614 7918 8 1 0 chrUextra 3844578 3845521 -25159135 - DOC2_DM LINE Jockey -1107 3686 2743 7 614 1978 118 71 55 chrUextra 3845841 3846495 -25158161 - DNAREP1_DM LINE Penelope 0 594 24 7 614 3387 181 14 70 chrUextra 3846663 3847603 -25157053 - SAR_DM Satellite Satellite -443 888 1 7 614 302 148 3 0 chrUextra 3848069 3848126 -25156530 + HETA LINE telomeric 4170 4217 -1864 7 614 24 0 0 0 chrUextra 3848400 3848424 -25156232 + AT_rich Low_complexity Low_complexity 1 24 0 7 614 25 75 0 0 chrUextra 3848493 3848546 -25156110 + AT_rich Low_complexity Low_complexity 1 53 0 7 614 6092 23 117 0 chrUextra 3848747 3849689 -25154967 - R1_DM LINE R1 -1595 3761 2710 7 614 3758 183 15 19 chrUextra 3849789 3850731 -25153925 - SAR_DM Satellite Satellite -268 1204 267 7 614 2477 85 17 32 chrUextra 3850832 3851773 -25152883 + DMSAT6 Satellite Satellite 1 926 -48 7 614 3017 19 3 0 chrUextra 3851873 3852237 -25152419 + R1_DM LINE R1 4992 5356 0 7 614 4062 61 4 4 chrUextra 3852270 3852815 -25151841 + R1_DM LINE R1 1 545 -4811 7 614 732 106 0 8 chrUextra 3852915 3853039 -25151617 - ARS406_DM Unknown Unknown -230 123 1 7 614 3580 189 11 11 chrUextra 3852945 3853827 -25150829 + SAR_DM Satellite Satellite 195 1076 -396 7 614 3331 115 52 4 chrUextra 3854107 3854891 -25149765 + DMRT1C LINE R1 3743 4615 -828 7 614 1282 24 24 0 chrUextra 3854999 3855164 -25149492 - DM176_LTR LTR Gypsy -88 419 251 7 614 2208 7 0 78 chrUextra 3855165 3855472 -25149184 - DM176_LTR LTR Gypsy -224 283 1 7 614 216 0 0 0 chrUextra 3855473 3855497 -25149159 + (TA)n Simple_repeat Simple_repeat 1 24 0 7 614 3705 7 2 0 chrUextra 3855497 3855939 -25148717 - IDEFIX_LTR LTR Gypsy -1 593 151 7 614 1046 15 7 0 chrUextra 3856043 3856180 -25148476 + G_DM LINE Jockey 3483 3620 -726 7 614 246 150 0 0 chrUextra 3856255 3856295 -25148361 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 614 4857 16 18 3 chrUextra 3856368 3856983 -25147673 + G_DM LINE Jockey 1 624 -3722 7 614 3650 195 16 20 chrUextra 3857084 3858025 -25146631 + SAR_DM Satellite Satellite 1 937 -216 7 614 500 110 0 0 chrUextra 3858125 3858207 -25146449 - ARS406_DM Unknown Unknown -271 82 1 7 614 3344 205 7 17 chrUextra 3858160 3859049 -25145607 + SAR_DM Satellite Satellite 239 1118 -354 7 614 300 198 10 29 chrUextra 3858963 3859067 -25145589 - XDMR_DM Unknown Unknown 0 360 259 7 614 2127 110 146 7 chrUextra 3859179 3859591 -25145065 + Invader1_I LTR Gypsy 2718 3186 0 7 614 1490 129 17 38 chrUextra 3859591 3859882 -25144774 + Invader1_LTR LTR Gypsy 1 285 -138 7 614 4025 2 0 0 chrUextra 3860210 3860680 -25143976 + DM176_LTR LTR Gypsy 38 507 0 7 614 1566 20 2 0 chrUextra 3860686 3861146 -25143510 + (TTATA)n Simple_repeat Simple_repeat 1 461 0 7 614 26 0 0 0 chrUextra 3861601 3861627 -25143029 + AT_rich Low_complexity Low_complexity 1 26 0 7 614 1793 271 8 9 chrUextra 3862303 3862965 -25141691 - QUASIMODO_I LTR Gypsy -561 5499 4839 7 614 2050 187 57 22 chrUextra 3863345 3864190 -25140466 - TART LINE telomeric -731 9732 8525 7 614 724 42 0 0 chrUextra 3864181 3864277 -25140379 - G6_DM LINE Jockey 0 2042 1947 7 614 3590 193 11 16 chrUextra 3864377 3865293 -25139363 + SAR_DM Satellite Satellite 208 1118 -354 7 614 417 200 0 18 chrUextra 3865207 3865319 -25139337 - XDMR_DM Unknown Unknown 0 360 251 7 614 1879 79 4 0 chrUextra 3865420 3865685 -25138971 - Baggins1 LINE LOA -426 5027 4762 7 614 884 183 80 90 chrUextra 3865994 3866306 -25138350 - TIRANT_LTR LTR Gypsy -108 309 1 7 614 2821 12 0 0 chrUextra 3866461 3866798 -25137858 + DM176_LTR LTR Gypsy 171 507 0 7 614 3465 23 0 16 chrUextra 3866953 3867403 -25137253 + STALKER4_I LTR Gypsy 1064 1506 -5024 7 614 1089 94 0 0 chrUextra 3867503 3867652 -25137004 + Gypsy12_I LTR Gypsy 1673 1821 -3725 7 614 5052 83 93 26 chrUextra 3867649 3868445 -25136211 + Gypsy12_I LTR Gypsy 4465 5313 -233 7 614 1447 313 20 23 chrUextra 3868553 3869288 -25135368 - Copia2_I LTR Copia -2071 2091 1359 7 614 697 54 0 0 chrUextra 3869586 3869679 -25134977 + DOC3_DM LINE Jockey 759 851 -3889 7 614 1998 24 4 0 chrUextra 3869676 3869925 -25134731 + DOC3_DM LINE Jockey 1016 1265 -3475 7 614 4657 40 17 0 chrUextra 3869930 3870527 -25134129 + DOC3_DM LINE Jockey 1647 2253 -2487 7 614 6475 29 116 0 chrUextra 3870627 3871568 -25133088 + MAX_I LTR Pao 4075 5124 -2790 7 614 1623 101 108 25 chrUextra 3872709 3873023 -25131633 - BATUMI_I LTR Pao -7623 340 1 7 614 1993 35 3 34 chrUextra 3873023 3873315 -25131341 - BATUMI_I LTR Pao -679 7284 7002 7 614 551 0 130 6 chrUextra 3873315 3873640 -25131016 + (TA)n Simple_repeat Simple_repeat 1 365 0 7 614 2396 164 10 5 chrUextra 3873750 3874688 -25129968 + SAR_DM Satellite Satellite 1 942 -588 7 614 3967 17 90 3 chrUextra 3874791 3875477 -25129179 - R1_DM LINE R1 -1416 3940 3195 7 614 2091 19 0 0 chrUextra 3875475 3875732 -25128924 - R1_DM LINE R1 -2484 2872 2616 7 614 345 91 0 0 chrUextra 3876077 3876132 -25128524 + PROTOP_A DNA P 219 273 -832 7 614 4395 13 30 0 chrUextra 3876183 3876380 -25128276 - QUASIMODO_I LTR Gypsy -5513 547 351 7 614 218 56 0 27 chrUextra 3876380 3876417 -25128239 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 7 614 4395 13 30 0 chrUextra 3876417 3876750 -25127906 - QUASIMODO_I LTR Gypsy -5710 350 2 7 614 634 106 71 12 chrUextra 3876873 3877173 -25127483 + CT-rich Low_complexity Low_complexity 1 317 0 7 614 625 90 0 0 chrUextra 3878985 3879074 -25125582 - ACCORD2_I LTR Gypsy -4448 2764 2676 7 614 3149 84 14 10 chrUextra 3879075 3879569 -25125087 - ACCORD2_I LTR Gypsy -4843 2369 1874 7 614 219 69 0 0 chrUextra 3879569 3879598 -25125058 + (TA)n Simple_repeat Simple_repeat 2 30 0 7 614 2524 104 65 14 chrUextra 3880286 3880732 -25123924 + Invader1_I LTR Gypsy 2718 3186 0 7 614 1034 88 88 54 chrUextra 3880732 3880937 -25123719 + Invader1_LTR LTR Gypsy 1 212 -211 7 614 2670 179 14 9 chrUextra 3881037 3881970 -25122686 + SAR_DM Satellite Satellite 1 937 -1005 7 614 2509 176 61 33 chrUextra 3882078 3882626 -25122030 + TART_B1 LINE telomeric 1634 2357 -8297 7 614 1981 21 0 0 chrUextra 3882626 3882859 -25121797 + PROTOP_A DNA P 873 1105 0 7 614 2509 176 61 33 chrUextra 3882859 3883019 -25121637 + TART_B1 LINE telomeric 2358 2571 -8083 7 614 7393 37 24 0 chrUextra 3883119 3884060 -25120596 - MAX_I LTR Pao -2464 5450 4487 7 614 2743 78 71 2 chrUextra 3884160 3884595 -25120061 + TRANSIB2 DNA Transib 2315 2779 -65 7 614 3466 105 0 0 chrUextra 3884596 3885101 -25119555 - DMRT1B LINE R1 -1372 3811 3307 7 614 1811 18 0 5 chrUextra 3885201 3885419 -25119237 + R1_DM LINE R1 5140 5356 0 7 614 4386 60 3 3 chrUextra 3885453 3886041 -25118615 + R1_DM LINE R1 24 611 -4745 7 614 679 63 0 0 chrUextra 3886043 3886138 -25118518 + R1_DM LINE R1 1157 1251 -4105 7 614 5803 4 19 1 chrUextra 3886243 3886965 -25117691 + Invader3_I LTR Gypsy 4154 4888 0 7 614 1718 23 55 0 chrUextra 3886965 3887183 -25117473 + Invader3_LTR LTR Gypsy 1 230 -68 7 614 3501 193 19 22 chrUextra 3887284 3888200 -25116456 + SAR_DM Satellite Satellite 246 1158 -314 7 614 435 214 14 21 chrUextra 3888078 3888221 -25116435 - XDMR_DM Unknown Unknown 0 360 219 7 614 2370 132 24 32 chrUextra 3888324 3889264 -25115392 - DMSAT6 Satellite Satellite -79 932 1 7 614 3830 185 36 21 chrUextra 3889367 3890306 -25114350 + SAR_DM Satellite Satellite 259 1211 -261 7 614 3503 37 34 0 chrUextra 3890406 3890842 -25113814 - DMCR1A LINE CR1 -1738 2732 2282 7 614 468 93 0 0 chrUextra 3891041 3891116 -25113540 - TLD2 Unknown Unknown 0 218 144 7 614 30 27 0 0 chrUextra 3891550 3891587 -25113069 + AT_rich Low_complexity Low_complexity 1 37 0 7 614 1530 98 43 4 chrUextra 3891839 3892074 -25112582 + BS2 LINE Jockey 14 257 -4464 7 614 1918 40 12 8 chrUextra 3892073 3892327 -25112329 - G5_DM LINE Jockey 0 4856 4602 7 614 388 31 328 0 chrUextra 3892324 3892388 -25112268 - G5_DM LINE Jockey -489 4367 4283 7 614 3092 193 67 28 chrUextra 3892489 3893427 -25111229 + SAR_DM Satellite Satellite 1 973 -203 7 614 4001 184 13 21 chrUextra 3893529 3894462 -25110194 + SAR_DM Satellite Satellite 267 1191 -281 7 614 265 31 0 0 chrUextra 3894438 3894470 -25110186 - ARS406_DM Unknown Unknown -164 189 158 7 614 2640 176 13 9 chrUextra 3894699 3895488 -25109168 - SAR_DM Satellite Satellite -478 791 1 7 614 4664 22 13 0 chrUextra 3895610 3896165 -25108491 + NINJA_I LTR Pao 414 975 -5036 7 614 3184 23 5 0 chrUextra 3896161 3896550 -25108106 + NINJA_I LTR Pao 1705 2095 -3916 7 614 186 43 0 0 chrUextra 3896815 3896838 -25107818 + (TTTTTA)n Simple_repeat Simple_repeat 1 23 0 7 614 270 208 0 0 chrUextra 3897537 3897590 -25107066 + TOM_I LTR Gypsy 2196 2248 -3864 7 614 1379 102 5 5 chrUextra 3897695 3897901 -25106755 + BS2 LINE Jockey 52 257 -4464 7 614 1918 40 12 8 chrUextra 3897900 3898154 -25106502 - G5_DM LINE Jockey 0 4856 4602 7 614 2841 59 59 0 chrUextra 3898151 3898525 -25106131 - G5_DM LINE Jockey -489 4367 3972 7 614 21 0 0 0 chrUextra 3898556 3898577 -25106079 + AT_rich Low_complexity Low_complexity 1 21 0 7 614 3803 171 107 15 chrUextra 3899774 3900710 -25103946 - HETA LINE telomeric -586 5495 4474 7 614 3357 212 32 24 chrUextra 3900811 3901749 -25102907 - SAR_DM Satellite Satellite -281 1191 246 7 614 3662 192 21 28 chrUextra 3902890 3903823 -25100833 + SAR_DM Satellite Satellite 304 1230 -242 7 614 1537 327 8 10 chrUextra 3904257 3904869 -25099787 + HMSBEAGLE_I LTR Gypsy 1440 2050 -4479 7 614 576 90 0 22 chrUextra 3904970 3905061 -25099595 + RSP Satellite Satellite 17 105 -13 7 614 7295 21 0 8 chrUextra 3905065 3905910 -25098746 - G5_DM LINE Jockey 0 4856 4019 7 614 2962 6 9 0 chrUextra 3906013 3906360 -25098296 + IDEFIX_LTR LTR Gypsy 245 594 0 7 614 740 11 11 0 chrUextra 3907050 3907142 -25097514 + IVK_DM LINE I 5309 5401 -1 7 614 5935 36 33 1 chrUextra 3907259 3907990 -25096666 - DMCR1A LINE CR1 0 4470 3717 7 614 1609 0 5 5 chrUextra 3908090 3908278 -25096378 - Copia2_LTR_DM LTR Copia -10 188 1 7 614 1841 35 8 38 chrUextra 3908278 3908544 -25096112 - Copia2_I LTR Copia 0 4162 3905 7 614 4308 16 6 0 chrUextra 3908536 3909030 -25095626 - Copia2_I LTR Copia -1572 2590 2094 7 614 4575 8 0 17 chrUextra 3909130 3909657 -25094999 - DOC LINE Jockey -4176 549 32 7 614 21 89 0 0 chrUextra 3910176 3910232 -25094424 + AT_rich Low_complexity Low_complexity 1 56 0 7 614 29 70 0 0 chrUextra 3910270 3910327 -25094329 + AT_rich Low_complexity Low_complexity 1 57 0 7 614 26 30 0 0 chrUextra 3910367 3910400 -25094256 + AT_rich Low_complexity Low_complexity 1 33 0 7 614 3459 56 69 0 chrUextra 3910562 3911041 -25093615 - PROTOP DNA P -3968 512 1 7 614 2315 178 29 14 chrUextra 3911215 3911741 -25092915 - SAR_DM Satellite Satellite -1109 533 1 7 614 1488 172 32 9 chrUextra 3911752 3912092 -25092564 - SAR_DM Satellite Satellite -396 1076 729 7 614 795 11 0 31 chrUextra 3912250 3912348 -25092308 - NTS_DM Other Other -121 119 25 7 614 22 56 0 0 chrUextra 3912374 3912410 -25092246 + AT_rich Low_complexity Low_complexity 1 36 0 7 614 269 125 0 0 chrUextra 3912423 3912463 -25092193 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 614 3365 0 0 0 chrUextra 3912524 3912889 -25091767 - R2_DM LINE R2 -1322 2285 1921 7 614 2775 0 0 0 chrUextra 3912886 3913189 -25091467 - LSU-rRNA_Dme rRNA rRNA -1274 2626 2324 7 614 3757 195 21 15 chrUextra 3913302 3914230 -25090426 - SAR_DM Satellite Satellite -435 933 1 7 614 6639 11 0 96 chrUextra 3914330 3915270 -25089386 - MDG3_I LTR Gypsy -2920 2066 1217 7 614 1258 287 38 38 chrUextra 3915415 3916222 -25088434 + ZAM_I LTR Gypsy 4717 5523 -1967 7 614 4024 185 16 19 chrUextra 3916410 3917348 -25087308 - SAR_DM Satellite Satellite -308 1164 230 7 614 7240 47 64 5 chrUextra 3917448 3918387 -25086269 + BATUMI_I LTR Pao 4428 5421 -2542 7 614 5635 5 0 0 chrUextra 3918487 3919109 -25085547 + DMRT1B LINE R1 4562 5183 0 7 614 242 114 0 0 chrUextra 3919290 3919325 -25085331 - Invader1_I LTR Gypsy 0 3186 3152 7 614 7487 21 95 1 chrUextra 3920565 3921504 -25083152 - R1_DM LINE R1 -2207 3149 2123 7 614 1596 135 57 57 chrUextra 3921626 3922050 -25082606 + BATUMI_I LTR Pao 292 715 -7248 7 614 4064 27 4 4 chrUextra 3922055 3922537 -25082119 + Gypsy_LTR LTR Gypsy 1 482 0 7 614 4779 16 9 0 chrUextra 3922643 3923216 -25081440 + QUASIMODO_I LTR Gypsy 972 1549 -4511 7 614 3197 8 0 0 chrUextra 3923216 3923582 -25081074 + QUASIMODO_I LTR Gypsy 1883 2248 -3812 7 614 2549 106 12 31 chrUextra 3924721 3925658 -25078998 + DMSAT6 Satellite Satellite 1 918 -69 7 614 3887 194 14 19 chrUextra 3925762 3926699 -25077957 - SAR_DM Satellite Satellite -291 1181 250 7 614 1693 121 151 36 chrUextra 3926799 3927467 -25077189 - Gypsy12_I LTR Gypsy -4746 800 1 7 614 1638 103 4 52 chrUextra 3927467 3927734 -25076922 - Gypsy12_LTR LTR Gypsy 0 2336 2083 7 614 8133 12 24 1 chrUextra 3927839 3928777 -25075879 + R2_DM LINE R2 381 1339 -2268 7 614 7913 38 0 0 chrUextra 3928877 3929816 -25074840 - MAX_I LTR Pao -5206 2708 1770 7 614 3945 7 2 2 chrUextra 3929916 3930371 -25074285 - ACCORD_I LTR Gypsy -5833 455 1 7 614 4309 0 33 0 chrUextra 3930371 3930855 -25073801 - ACCORD_LTR LTR Gypsy 0 558 59 7 614 3399 194 32 11 chrUextra 3930955 3931894 -25072762 + SAR_DM Satellite Satellite 1 959 -244 7 76 5029 21 2 0 chrUextra 3931994 3932575 -25072081 + R1_DM LINE R1 4775 5356 0 7 615 2450 62 6 6 chrUextra 3932608 3932933 -25071723 + R1_DM LINE R1 1 325 -5031 7 615 240 184 39 13 chrUextra 3933035 3933112 -25071544 + MDG1_LTR LTR Gypsy 334 412 -30 7 615 2982 125 35 3 chrUextra 3933113 3933972 -25070684 + BS3_DM LINE Jockey 1 766 -1024 7 615 8014 6 44 1 chrUextra 3934072 3935011 -25069645 - DMRT1B LINE R1 -3666 1517 539 7 615 323 67 0 0 chrUextra 3935111 3935156 -25069500 - ARS406_DM Unknown Unknown -308 45 1 7 615 3858 180 18 25 chrUextra 3935116 3936049 -25068607 + SAR_DM Satellite Satellite 246 1172 -300 7 615 3719 189 13 21 chrUextra 3936150 3937089 -25067567 - SAR_DM Satellite Satellite -450 931 1 7 615 744 285 12 12 chrUextra 3937203 3937523 -25067133 + Copia_I LTR Copia 1960 2279 -2314 7 615 418 197 0 0 chrUextra 3937795 3937866 -25066790 + HETA LINE telomeric 4533 4603 -1478 7 615 6513 38 0 8 chrUextra 3938229 3939017 -25065639 - DOC3_DM LINE Jockey -743 3997 3216 7 615 978 33 419 0 chrUextra 3939017 3939165 -25065491 - PROTOP_A DNA P 0 1105 896 7 615 5904 17 1 4 chrUextra 3939265 3939967 -25064689 + PROTOP_A DNA P 406 1105 0 7 615 1763 47 0 0 chrUextra 3939970 3940203 -25064453 - PROTOP_A DNA P -688 417 185 7 615 355 0 0 23 chrUextra 3940303 3940347 -25064309 - DOC2_DM LINE Jockey -4744 49 7 7 615 3543 187 16 30 chrUextra 3940356 3941234 -25063422 + SAR_DM Satellite Satellite 380 1245 -227 7 615 1425 29 0 0 chrUextra 3941342 3941516 -25063140 + (TTATA)n Simple_repeat Simple_repeat 2 175 0 7 615 1499 28 0 19 chrUextra 3941537 3941899 -25062757 + (TTATA)n Simple_repeat Simple_repeat 1 355 0 7 615 1346 70 14 22 chrUextra 3941921 3942274 -25062382 + (TTATA)n Simple_repeat Simple_repeat 1 350 0 7 615 7071 53 4 8 chrUextra 3943417 3944355 -25060301 - IDEFIX_I LTR Gypsy -1946 3682 2748 7 615 1751 294 48 28 chrUextra 3944457 3945372 -25059284 + Copia2_I LTR Copia 977 1909 -2253 7 615 3299 204 10 15 chrUextra 3945493 3946430 -25058226 + SAR_DM Satellite Satellite 1 932 -216 7 615 851 36 0 0 chrUextra 3946531 3946642 -25058014 + ARS406_DM Unknown Unknown 79 189 -164 7 615 3361 203 14 20 chrUextra 3946551 3947467 -25057189 - SAR_DM Satellite Satellite -216 1256 346 7 615 7269 43 1 0 chrUextra 3947569 3948507 -25056149 + G2_DM LINE Jockey 1534 2472 -630 7 615 2393 194 16 21 chrUextra 3949651 3950583 -25054073 - SAR_DM Satellite Satellite -569 927 1 7 615 3753 2 0 2 chrUextra 3950683 3951142 -25053514 + STALKER4_I LTR Gypsy 3112 3569 -2961 7 615 4044 13 0 0 chrUextra 3951142 3951620 -25053036 + PROTOP_A DNA P 1 478 -627 7 615 7119 31 25 5 chrUextra 3951720 3952656 -25052000 - LSU-rRNA_Dme rRNA rRNA -2195 1705 752 7 615 2389 105 32 12 chrUextra 3952759 3953694 -25050962 - DMSAT6 Satellite Satellite -28 953 1 7 615 398 23 0 142 chrUextra 3953794 3954191 -25050465 + GA-rich Low_complexity Low_complexity 1 340 0 7 615 1076 81 0 24 chrUextra 3954831 3954995 -25049661 + DMCR1A LINE CR1 2038 2197 -2273 7 615 401 53 0 0 chrUextra 3954996 3955053 -25049603 + DMCR1A LINE CR1 2385 2441 -2029 7 615 3957 48 36 0 chrUextra 3955072 3955595 -25049061 + DMCR1A LINE CR1 2523 3064 -1406 7 615 813 65 70 35 chrUextra 3955597 3955740 -25048916 + DMCR1A LINE CR1 3434 3581 -889 7 615 252 77 0 0 chrUextra 3955727 3955766 -25048890 + DMCR1A LINE CR1 3702 3740 -730 7 615 495 25 0 12 chrUextra 3955868 3955948 -25048708 + IDEFIX_LTR LTR Gypsy 516 594 0 7 615 703 80 0 94 chrUextra 3955954 3956092 -25048564 - MDG1_I LTR Gypsy -5818 778 654 7 615 576 114 8 47 chrUextra 3956217 3956346 -25048310 - MDG1_I LTR Gypsy -6012 584 461 7 615 681 111 200 0 chrUextra 3956340 3956475 -25048181 - MDG1_I LTR Gypsy -6363 233 72 7 615 414 103 0 143 chrUextra 3956526 3956617 -25048039 - MDG1_I LTR Gypsy -6518 78 1 7 615 1858 179 9 7 chrUextra 3956905 3957327 -25047329 - SAR_DM Satellite Satellite -724 748 326 7 615 2231 164 18 10 chrUextra 3957349 3957842 -25046814 - SAR_DM Satellite Satellite -569 903 407 7 615 6378 73 35 0 chrUextra 3957942 3958874 -25045782 - TART LINE telomeric -13315 1162 198 7 615 3340 199 24 16 chrUextra 3958979 3959916 -25044740 + SAR_DM Satellite Satellite 1 944 -220 7 615 3418 176 39 29 chrUextra 3960016 3960953 -25043703 - SAR_DM Satellite Satellite -442 946 1 7 615 3506 188 29 24 chrUextra 3961053 3961985 -25042671 + SAR_DM Satellite Satellite 294 1230 -242 7 615 2021 19 0 0 chrUextra 3962090 3962361 -25042295 - DM297_I LTR Gypsy -285 5882 5612 7 615 5612 9 0 0 chrUextra 3962346 3963027 -25041629 - DM297_I LTR Gypsy -1660 4507 3827 7 615 7778 21 1 1 chrUextra 3963127 3964064 -25040592 - G5_DM LINE Jockey -295 4561 3625 7 615 763 61 0 0 chrUextra 3964164 3964278 -25040378 - IDEFIX_I LTR Gypsy -1006 4622 4509 7 615 5973 56 16 0 chrUextra 3964268 3965101 -25039555 - IDEFIX_I LTR Gypsy -1346 4282 3437 7 615 766 0 0 11 chrUextra 3965201 3965294 -25039362 + MDG3_I LTR Gypsy 4895 4986 0 7 615 2257 11 0 0 chrUextra 3965294 3965561 -25039095 + MDG3_LTR LTR Gypsy 1 267 0 7 615 679 292 7 10 chrUextra 3965574 3965875 -25038781 + ROVER-I_DM LTR Gypsy 1352 1651 -4933 7 615 543 215 0 8 chrUextra 3965884 3966015 -25038641 + ROVER-I_DM LTR Gypsy 1805 1934 -4650 7 615 2150 15 0 0 chrUextra 3966238 3966497 -25038159 - DM176_LTR LTR Gypsy -248 259 1 7 615 1226 24 0 46 chrUextra 3966497 3966650 -25038006 + STALKER4_LTR LTR Gypsy 258 402 0 7 615 330 25 0 0 chrUextra 3966650 3966677 -25037979 + STALKER4_I LTR Gypsy 1 27 -6503 7 615 289 96 0 37 chrUextra 3966677 3966731 -25037925 + Stalker2_I LTR Gypsy 1 52 -7350 7 615 1267 163 82 0 chrUextra 3966905 3967175 -25037481 + Stalker2_I LTR Gypsy 252 543 -6859 7 615 1875 181 17 19 chrUextra 3967278 3967752 -25036904 + SAR_DM Satellite Satellite 293 765 -707 7 615 2705 33 0 0 chrUextra 3967751 3968087 -25036569 + DM1731_LTR LTR Copia 1 336 0 7 615 1049 8 8 0 chrUextra 3968087 3968212 -25036444 + DM1731_I LTR Copia 1 126 -3850 7 615 2247 111 23 29 chrUextra 3968333 3969249 -25035407 + DMSAT6 Satellite Satellite 1 910 0 7 615 4577 6 0 0 chrUextra 3969349 3969885 -25034771 - Copia2_I LTR Copia -3610 552 17 7 615 3366 8 0 2 chrUextra 3969885 3970286 -25034370 - Gypsy5_LTR LTR Gypsy 0 430 31 7 615 3402 187 15 16 chrUextra 3970387 3971322 -25033334 + SAR_DM Satellite Satellite 1 933 -208 7 615 758 330 49 31 chrUextra 3971422 3972345 -25032311 + Copia2_I LTR Copia 1823 2761 -1401 7 615 3753 184 15 22 chrUextra 3972458 3973386 -25031270 + SAR_DM Satellite Satellite 251 1172 -300 7 615 3752 8 42 2 chrUextra 3973494 3973965 -25030691 + IDEFIX_LTR LTR Gypsy 105 594 0 7 615 212 0 0 35 chrUextra 3974099 3974128 -25030528 + (TTA)n Simple_repeat Simple_repeat 2 29 0 7 615 1040 148 64 5 chrUextra 3974158 3974361 -25030295 - DNAREP1_DM LINE Penelope -358 236 22 7 615 7209 4 0 6 chrUextra 3974530 3975372 -25029284 - LSU-rRNA_Dme rRNA rRNA -1276 2624 1788 7 615 391 0 0 20 chrUextra 3975416 3975466 -25029190 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1740 7 615 2501 0 0 7 chrUextra 3975566 3975855 -25028801 - BLOOD_LTR LTR Gypsy -112 287 1 7 615 5620 0 0 0 chrUextra 3975855 3976502 -25028154 - DOC LINE Jockey -2252 2473 1827 7 615 3692 200 12 19 chrUextra 3976606 3977535 -25027121 - SAR_DM Satellite Satellite -396 922 1 7 615 6254 66 133 2 chrUextra 3977638 3978574 -25026082 - TART_B1 LINE telomeric -7172 3482 2424 7 615 236 273 41 48 chrUextra 3979730 3979876 -25024780 + Gypsy9_I LTR Gypsy 2642 2786 -1891 7 615 3258 212 7 19 chrUextra 3980746 3981672 -25022984 + SAR_DM Satellite Satellite 206 1119 -353 7 615 354 191 0 21 chrUextra 3981586 3981682 -25022974 - XDMR_DM Unknown Unknown 0 360 267 7 615 3714 189 19 20 chrUextra 3981783 3982718 -25021938 + SAR_DM Satellite Satellite 224 1157 -315 7 615 7548 31 0 0 chrUextra 3982818 3983754 -25020902 + NINJA_I LTR Pao 1607 2542 -3469 7 615 2657 168 14 7 chrUextra 3983855 3984790 -25019866 + SAR_DM Satellite Satellite 1 942 -558 7 615 3182 178 35 18 chrUextra 3984890 3985826 -25018830 - SAR_DM Satellite Satellite -430 951 1 7 615 3370 187 20 25 chrUextra 3985926 3986814 -25017842 + SAR_DM Satellite Satellite 373 1256 -216 7 615 1009 50 0 0 chrUextra 3986723 3986862 -25017794 - ARS406_DM Unknown Unknown -164 189 51 7 615 315 113 0 0 chrUextra 3986962 3987024 -25017632 + MDG1_I LTR Gypsy 6143 6204 -392 7 615 437 110 46 33 chrUextra 3987017 3987168 -25017488 + MDG1_I LTR Gypsy 6395 6547 -49 7 615 341 60 0 113 chrUextra 3987177 3987272 -25017384 + MDG1_I LTR Gypsy 6530 6596 0 7 615 1587 25 0 8 chrUextra 3987276 3987637 -25017019 + (TAA)n Simple_repeat Simple_repeat 1 358 0 7 615 1165 152 100 12 chrUextra 3987639 3987898 -25016758 + MDG1_LTR LTR Gypsy 89 370 -72 7 615 7530 21 26 0 chrUextra 3987998 3988934 -25015722 - R1_DM LINE R1 -2030 3326 2367 7 615 7211 24 41 16 chrUextra 3989034 3989970 -25014686 - CIRCE LINE Composite -2790 3566 2608 7 615 1789 0 0 0 chrUextra 3990070 3990280 -25014376 + Copia_I LTR Copia 4384 4593 0 7 615 2260 0 4 0 chrUextra 3990280 3990555 -25014101 + Copia_LTR LTR Copia 1 276 0 7 615 423 184 354 0 chrUextra 3990629 3990787 -25013869 + PROTOP_B DNA P 940 1153 0 7 615 233 132 0 0 chrUextra 3990787 3990825 -25013831 + PROTOP_B DNA P 1116 1153 0 7 615 2623 52 0 0 chrUextra 3991118 3991466 -25013190 + G2_DM LINE Jockey 2680 3027 -75 7 615 4743 30 0 0 chrUextra 3991465 3992042 -25012614 - G2_DM LINE Jockey -1645 1457 881 7 615 7121 43 8 14 chrUextra 3992142 3993078 -25011578 - BATUMI_I LTR Pao -3692 4271 3341 7 615 7720 19 2 0 chrUextra 3993178 3994114 -25010542 + STALKER4_I LTR Gypsy 4069 5006 -1524 7 615 7924 3 3 0 chrUextra 3994214 3995150 -25009506 + G6_DM LINE Jockey 301 1239 -803 7 615 2372 99 17 30 chrUextra 3995250 3996186 -25008470 + DMSAT6 Satellite Satellite 1 924 -69 7 615 1966 205 191 51 chrUextra 3996287 3997222 -25007434 + TAHRE LINE telomeric 9358 10423 -40 7 615 2313 103 93 0 chrUextra 3997322 3997710 -25006946 + DM176_I LTR Gypsy 2863 3286 -3134 7 615 1327 121 5 14 chrUextra 3997702 3997920 -25006736 + DM176_I LTR Gypsy 3453 3668 -2752 7 615 8007 97 30 2 chrUextra 3997929 3999292 -25005364 - DMRT1B LINE R1 -581 4602 3137 7 615 2421 197 8 7 chrUextra 3999392 3999999 -25004657 - SAR_DM Satellite Satellite -685 787 180 7 615 1672 169 3 3 chrUextra 4000001 4000327 -25004329 - SAR_DM Satellite Satellite -577 895 570 7 615 253 191 58 14 chrUextra 4001182 4001251 -25003405 + DM176_LTR LTR Gypsy 295 366 -141 7 615 456 151 54 0 chrUextra 4001268 4001361 -25003295 + DMTOM1_LTR LTR Gypsy 284 381 -29 7 615 3069 17 0 0 chrUextra 4001462 4001811 -25002845 - TAHRE LINE telomeric -7753 2710 2362 7 615 4458 36 85 10 chrUextra 4001811 4002397 -25002259 - TAHRE LINE telomeric -8422 2041 1412 7 615 3787 203 10 20 chrUextra 4002497 4003421 -25001235 + SAR_DM Satellite Satellite 1 915 -242 7 615 1945 0 18 0 chrUextra 4003539 4003758 -25000898 - DMRT1B LINE R1 -66 5117 4895 7 615 2271 28 17 10 chrUextra 4003755 4004047 -25000609 - DMRT1B LINE R1 -1868 3315 3022 7 615 357 155 93 46 chrUextra 4004682 4004790 -24999866 - TART_B1 LINE telomeric -132 10522 10410 7 615 1304 135 110 4 chrUextra 4004790 4005035 -24999621 - TART LINE telomeric -481 13996 13726 7 615 1497 199 161 35 chrUextra 4005047 4005475 -24999181 - TART LINE telomeric -1139 13338 12857 7 615 3230 8 0 0 chrUextra 4005602 4005963 -24998693 - MDG3_I LTR Gypsy -4625 361 1 7 615 2163 30 8 0 chrUextra 4005962 4006227 -24998429 - MDG3_LTR LTR Gypsy 0 267 1 7 615 1865 21 16 5 chrUextra 4006227 4006536 -24998120 - MDG3_I LTR Gypsy 0 4986 4608 7 615 3985 5 0 2 chrUextra 4006637 4007081 -24997575 + QUASIMODO_LTR LTR Gypsy 216 658 0 7 615 3526 42 108 0 chrUextra 4007092 4007572 -24997084 + IDEFIX_I LTR Gypsy 4442 4973 -655 7 615 2730 3 0 12 chrUextra 4007672 4007993 -24996663 - DOC LINE Jockey -4407 318 2 7 615 5467 11 2 0 chrUextra 4007991 4008607 -24996049 - MDG3_I LTR Gypsy -3399 1587 971 7 615 485 235 53 83 chrUextra 4008789 4009054 -24995602 + Gypsy3_LTR LTR Gypsy 112 368 -30 7 615 1867 128 100 52 chrUextra 4009140 4009642 -24995014 + ACCORD2_I LTR Gypsy 1507 2032 -5180 7 615 4061 190 13 21 chrUextra 4009747 4010677 -24993979 + SAR_DM Satellite Satellite 1 922 -203 7 615 1620 29 0 2 chrUextra 4010777 4011223 -24993433 + (TATAA)n Simple_repeat Simple_repeat 1 445 0 7 615 2389 0 0 0 chrUextra 4011226 4011502 -24993154 - Copia_LTR LTR Copia 0 276 1 7 615 1824 0 0 0 chrUextra 4011502 4011708 -24992948 - Copia_I LTR Copia 0 4593 4388 7 615 1235 0 7 0 chrUextra 4011812 4011951 -24992705 - DM1731_I LTR Copia -3836 140 1 7 615 2788 39 0 0 chrUextra 4011951 4012287 -24992369 - DM1731_LTR LTR Copia 0 336 1 7 615 1599 182 15 7 chrUextra 4012290 4012744 -24991912 + SAR_DM Satellite Satellite 1 457 -645 7 615 1234 123 133 79 chrUextra 4012847 4013270 -24991386 - IDEFIX_LTR LTR Gypsy -99 495 1 7 615 262 122 0 0 chrUextra 4013239 4013280 -24991376 + BARI1 DNA Tc1 4 44 -1706 7 615 207 113 48 0 chrUextra 4013283 4013345 -24991311 + (TA)n Simple_repeat Simple_repeat 2 66 0 7 615 1099 271 61 17 chrUextra 4013371 4013781 -24990875 - Gypsy4_I LTR Gypsy -3298 2990 2563 7 615 259 184 0 0 chrUextra 4013882 4013931 -24990725 + Copia_I LTR Copia 2068 2116 -2477 7 615 1107 291 32 39 chrUextra 4014349 4014814 -24989842 + FROGGER_I LTR Copia 407 868 -1209 7 615 7384 25 3 28 chrUextra 4014917 4015852 -24988804 + DOC2_DM LINE Jockey 505 1416 -3377 7 615 7119 57 32 1 chrUextra 4015952 4016887 -24987769 + ACCORD2_I LTR Gypsy 4861 5824 -1388 7 615 3857 194 13 19 chrUextra 4016987 4017913 -24986743 + SAR_DM Satellite Satellite 298 1217 -255 7 615 485 51 0 0 chrUextra 4017863 4017922 -24986734 - ARS406_DM Unknown Unknown -164 189 131 7 615 669 13 0 0 chrUextra 4018022 4018100 -24986556 + (TATAA)n Simple_repeat Simple_repeat 1 78 0 7 615 2788 33 0 0 chrUextra 4018100 4018431 -24986225 - DM1731_LTR LTR Copia -1 335 5 7 615 863 19 19 0 chrUextra 4018431 4018539 -24986117 + (TATAA)n Simple_repeat Simple_repeat 4 113 0 7 615 2752 36 0 9 chrUextra 4018539 4018877 -24985779 - DM1731_LTR LTR Copia -1 335 1 7 615 655 12 0 0 chrUextra 4018877 4018957 -24985699 - DM1731_I LTR Copia 0 3976 3897 7 615 1633 174 8 6 chrUextra 4019057 4019410 -24985246 - ROVER-I_DM LTR Gypsy -241 6343 5990 7 615 2984 162 2 16 chrUextra 4019445 4019991 -24984665 - ROVER-I_DM LTR Gypsy -1276 5308 4771 7 615 3084 14 0 3 chrUextra 4020097 4020454 -24984202 - MDG1_LTR LTR Gypsy 0 442 87 7 615 423 100 0 0 chrUextra 4020454 4020524 -24984132 + (TTA)n Simple_repeat Simple_repeat 3 72 0 7 615 2603 26 48 0 chrUextra 4020539 4020851 -24983805 - PROTOP DNA P -4153 327 1 7 615 1020 52 0 0 chrUextra 4021127 4021262 -24983394 + ARS406_DM Unknown Unknown 52 186 -167 7 615 3452 193 21 20 chrUextra 4021142 4021945 -24982711 - SAR_DM Satellite Satellite -535 921 26 7 615 660 53 52 10 chrUextra 4021945 4022041 -24982615 + ARS406_DM Unknown Unknown 90 189 -164 7 615 3452 193 21 20 chrUextra 4022041 4022062 -24982594 - SAR_DM Satellite Satellite -535 25 1 7 615 192 40 0 0 chrUextra 4022179 4022204 -24982452 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 615 523 224 16 8 chrUextra 4022204 4022330 -24982326 + HETRP_DM Satellite Satellite 1549 1675 -197 7 615 664 185 7 33 chrUextra 4022488 4022639 -24982017 + HETRP_DM Satellite Satellite 1529 1675 -197 7 615 715 179 14 14 chrUextra 4022778 4022925 -24981731 + HETRP_DM Satellite Satellite 1529 1675 -197 7 615 1445 47 19 5 chrUextra 4023816 4024031 -24980625 - TLD2 Unknown Unknown 0 218 1 7 615 723 276 26 30 chrUextra 4023865 4024130 -24980526 - Gypsy4_I LTR Gypsy -3504 2784 2521 7 615 3629 196 24 19 chrUextra 4025267 4026201 -24978455 - SAR_DM Satellite Satellite -470 1002 65 7 615 2050 293 61 7 chrUextra 4026302 4027140 -24977516 - OSVALDO_I LTR Gypsy -3646 3007 2125 7 615 5534 9 4 14 chrUextra 4027337 4028026 -24976630 + Invader2_I LTR Gypsy 3911 4592 0 7 615 2193 12 0 0 chrUextra 4028026 4028272 -24976384 + Invader2_LTR LTR Gypsy 1 246 -20 7 615 373 56 93 0 chrUextra 4028372 4028426 -24976230 + ARS406_DM Unknown Unknown 131 189 -164 7 615 3908 185 19 20 chrUextra 4028381 4029306 -24975350 - SAR_DM Satellite Satellite -255 1217 294 7 615 22 35 0 0 chrUextra 4030020 4030049 -24974607 + AT_rich Low_complexity Low_complexity 1 29 0 7 615 189 74 0 0 chrUextra 4030229 4030256 -24974400 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 615 2726 91 30 11 chrUextra 4030442 4031375 -24973281 + DMSAT6 Satellite Satellite 1 951 -285 7 615 7642 17 2 17 chrUextra 4031475 4032409 -24972247 + IDEFIX_I LTR Gypsy 2284 3203 -2425 7 615 3491 187 24 20 chrUextra 4032511 4033442 -24971214 + SAR_DM Satellite Satellite 1 934 -203 7 615 271 326 41 31 chrUextra 4033618 4033814 -24970842 + ACCORD2_I LTR Gypsy 558 755 -6457 7 615 4643 54 9 6 chrUextra 4033841 4034477 -24970179 - IDEFIX_I LTR Gypsy -1793 3835 3198 7 615 3532 198 17 19 chrUextra 4034577 4035465 -24969191 + SAR_DM Satellite Satellite 384 1269 -203 7 615 1017 60 27 0 chrUextra 4035362 4035511 -24969145 - ARS406_DM Unknown Unknown -164 189 37 7 615 649 0 0 0 chrUextra 4035611 4035683 -24968973 + ROVER-I_DM LTR Gypsy 6513 6584 0 7 615 3167 5 0 24 chrUextra 4035683 4036059 -24968597 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 615 2497 198 6 0 chrUextra 4036059 4036544 -24968112 + ROVER-I_DM LTR Gypsy 3862 4349 -2235 7 615 692 124 0 0 chrUextra 4036645 4036758 -24967898 - ARS406_DM Unknown Unknown -240 113 1 7 615 3724 190 23 20 chrUextra 4036668 4037569 -24967087 + SAR_DM Satellite Satellite 198 1101 -371 7 615 4387 2 0 0 chrUextra 4037679 4038171 -24966485 + FW_DM LINE Jockey 4201 4692 0 7 615 312 104 0 0 chrUextra 4038172 4038220 -24966436 - ARS406_DM Unknown Unknown -305 48 1 7 615 2086 157 21 12 chrUextra 4038177 4038609 -24966047 + SAR_DM Satellite Satellite 602 1037 -435 7 615 3077 73 110 2 chrUextra 4038713 4039148 -24965508 + Gypsy12_I LTR Gypsy 5065 5546 0 7 615 2147 192 30 48 chrUextra 4039147 4039646 -24965010 + Gypsy12_LTR LTR Gypsy 1 490 -1846 7 615 3761 2 0 0 chrUextra 4039747 4040160 -24964496 + NOMAD_LTR LTR Gypsy 106 518 0 7 615 28 48 0 0 chrUextra 4040198 4040240 -24964416 + AT_rich Low_complexity Low_complexity 1 42 0 7 615 514 119 36 0 chrUextra 4040514 4040598 -24964058 - NTS_DM Other Other -150 90 4 7 615 842 176 67 11 chrUextra 4040824 4041038 -24963618 - DNAREP1_DM LINE Penelope -262 332 117 7 615 1067 114 24 0 chrUextra 4041078 4041244 -24963412 - DNAREP1_DM LINE Penelope -419 175 6 7 615 231 139 0 0 chrUextra 4041251 4041294 -24963362 - DM176_I LTR Gypsy -1654 4766 4724 7 615 3291 112 84 117 chrUextra 4041815 4042748 -24961908 - BATUMI_I LTR Pao -6977 986 85 7 615 7715 7 20 1 chrUextra 4042849 4043065 -24961591 - STALKER4_I LTR Gypsy -987 5543 5329 7 615 183 80 0 0 chrUextra 4043065 4043090 -24961566 + (TATG)n Simple_repeat Simple_repeat 4 28 0 7 615 7715 7 20 1 chrUextra 4043090 4043783 -24960873 - STALKER4_I LTR Gypsy -1202 5328 4618 7 615 6723 62 72 4 chrUextra 4043883 4044809 -24959847 - DMCR1A LINE CR1 -2926 1544 556 7 615 2567 83 4 39 chrUextra 4044920 4045847 -24958809 + DMSAT6 Satellite Satellite 1 895 -85 7 615 5818 66 52 27 chrUextra 4045951 4046885 -24957771 + STALKER4_I LTR Gypsy 695 1652 -4878 7 615 2969 170 31 26 chrUextra 4046985 4047918 -24956738 + TAHRE LINE telomeric 9948 10451 -12 7 615 247 330 77 19 chrUextra 4048027 4048234 -24956422 + ACCORD2_I LTR Gypsy 537 755 -6457 7 615 1189 322 32 27 chrUextra 4048261 4048884 -24955772 + MICROPIA_I LTR Gypsy 1 626 -3850 7 615 3831 186 17 17 chrUextra 4049058 4049985 -24954671 + SAR_DM Satellite Satellite 180 1106 -366 7 615 2286 111 47 9 chrUextra 4050085 4050531 -24954125 + DMSAT6 Satellite Satellite 5 467 -3 7 615 2570 102 17 15 chrUextra 4050550 4051018 -24953638 + DMSAT6 Satellite Satellite 1 469 -1 7 615 1158 122 0 0 chrUextra 4051145 4051471 -24953185 + (TA)n Simple_repeat Simple_repeat 1 326 0 7 615 4503 4 0 0 chrUextra 4051473 4051980 -24952676 - DM176_LTR LTR Gypsy 0 507 1 7 615 650 0 0 0 chrUextra 4051980 4052051 -24952605 - DM176_I LTR Gypsy 0 6420 6350 7 615 22 0 0 0 chrUextra 4052228 4052250 -24952406 + AT_rich Low_complexity Low_complexity 1 22 0 7 615 312 232 0 0 chrUextra 4052523 4052592 -24952064 + BS2 LINE Jockey 4146 4214 -507 7 615 1089 106 8 73 chrUextra 4053189 4053446 -24951210 + Gypsy12_I LTR Gypsy 499 795 -4751 7 615 4629 96 36 8 chrUextra 4053448 4054117 -24950539 + Gypsy12_I LTR Gypsy 1363 2050 -3496 7 615 3689 187 12 22 chrUextra 4054232 4055122 -24949534 + SAR_DM Satellite Satellite 373 1253 -219 7 615 866 60 0 0 chrUextra 4055034 4055150 -24949506 - ARS406_DM Unknown Unknown -164 189 74 7 615 5047 2 0 0 chrUextra 4055250 4055839 -24948817 + Copia_I LTR Copia 2257 2845 -1748 7 615 3010 8 0 0 chrUextra 4055832 4056183 -24948473 + Copia_I LTR Copia 3508 3858 -735 7 615 3428 35 5 12 chrUextra 4056283 4056715 -24947941 + BATUMI_I LTR Pao 3046 3474 -4489 7 615 2314 50 9 9 chrUextra 4056708 4057033 -24947623 - BATUMI_I LTR Pao -1212 6751 6427 7 615 1087 62 0 0 chrUextra 4057056 4057216 -24947440 + BATUMI_I LTR Pao 7303 7462 -501 7 615 1155 67 11 32 chrUextra 4057316 4057501 -24947155 - DMCR1A LINE CR1 -35 4435 4255 7 615 1411 66 0 10 chrUextra 4057496 4057695 -24946961 - DMCR1A LINE CR1 -2868 1602 1406 7 615 1563 55 18 0 chrUextra 4057688 4057908 -24946748 - FB4_DM DNA Tc1 -3865 224 1 7 615 1475 178 117 9 chrUextra 4057908 4058249 -24946407 + FW_DM LINE Jockey 1026 1403 -3289 7 615 1649 165 22 16 chrUextra 4058349 4059282 -24945374 - SAR_DM Satellite Satellite -723 939 1 7 615 870 10 0 0 chrUextra 4059382 4059481 -24945175 + (GAGAA)n Simple_repeat Simple_repeat 2 100 0 7 615 503 120 43 0 chrUextra 4059538 4059630 -24945026 + DMCR1A LINE CR1 2677 2772 -1698 7 615 2627 181 98 11 chrUextra 4059662 4060315 -24944341 + DMCR1A LINE CR1 3167 3876 -594 7 615 1182 33 0 7 chrUextra 4060416 4060570 -24944086 + ROO_I LTR Pao 5738 5890 -2366 7 615 21 0 0 0 chrUextra 4061044 4061065 -24943591 + AT_rich Low_complexity Low_complexity 1 21 0 7 615 3755 185 7 9 chrUextra 4061469 4062353 -24942303 - SAR_DM Satellite Satellite -396 1076 195 7 615 738 107 0 0 chrUextra 4062260 4062381 -24942275 + ARS406_DM Unknown Unknown 1 121 -232 7 76 3333 168 10 9 chrUextra 4062483 4063414 -24941242 + SAR_DM Satellite Satellite 1 932 -416 7 616 3749 195 6 9 chrUextra 4063514 4064423 -24940233 - SAR_DM Satellite Satellite -1088 905 1 7 616 707 111 0 0 chrUextra 4064330 4064447 -24940209 + ARS406_DM Unknown Unknown 1 117 -236 7 616 8070 2 20 0 chrUextra 4065579 4066511 -24938145 + R2_DM LINE R2 1005 1955 -1652 7 616 647 133 0 0 chrUextra 4066611 4066724 -24937932 - ARS406_DM Unknown Unknown -240 113 1 7 616 3853 176 10 16 chrUextra 4066631 4067543 -24937113 + SAR_DM Satellite Satellite 195 1100 -372 7 616 252 0 0 0 chrUextra 4067669 4067697 -24936959 + (A)n Simple_repeat Simple_repeat 1 28 0 7 616 1491 57 0 0 chrUextra 4067700 4068132 -24936524 + (TAA)n Simple_repeat Simple_repeat 1 432 0 7 616 3754 0 5 0 chrUextra 4068137 4068575 -24936081 - IVK_DM LINE I 0 5402 4963 7 616 4449 60 2 1 chrUextra 4068689 4069605 -24935051 - Invader6_I LTR Gypsy -97 4002 3163 7 616 7429 21 56 0 chrUextra 4069707 4070639 -24934017 - R1_DM LINE R1 -2839 2517 1534 7 616 4229 131 8 20 chrUextra 4071771 4072673 -24931983 + Gypsy10_I LTR Gypsy 2586 3487 -2801 7 616 6326 33 5 0 chrUextra 4072912 4073735 -24930921 + PROTOP_A DNA P 74 900 -205 7 616 876 69 46 0 chrUextra 4073835 4073965 -24930691 - ROVER-LTR_DM LTR Gypsy -231 136 1 7 616 1711 155 167 10 chrUextra 4073965 4074479 -24930177 - ROVER-I_DM LTR Gypsy 0 6584 5990 7 616 1550 102 0 0 chrUextra 4074514 4074759 -24929897 - ROVER-I_DM LTR Gypsy -1276 5308 5064 7 616 319 276 55 45 chrUextra 4074867 4075168 -24929488 - MDG1_I LTR Gypsy -4501 2112 1748 7 616 7755 4 4 14 chrUextra 4075899 4076831 -24927825 - FW_DM LINE Jockey -464 4228 3306 7 616 7670 30 1 0 chrUextra 4076931 4077863 -24926793 + MAX_I LTR Pao 3784 4716 -3198 7 616 4319 4 0 0 chrUextra 4078348 4078855 -24925801 + DM176_LTR LTR Gypsy 1 507 0 7 616 7655 7 0 15 chrUextra 4078995 4079927 -24924729 + STALKER4_I LTR Gypsy 1480 2397 -4133 7 616 7050 16 3 5 chrUextra 4080027 4080918 -24923738 + Invader2_I LTR Gypsy 2502 3391 -1201 7 616 367 0 0 0 chrUextra 4080916 4080959 -24923697 + Invader2_I LTR Gypsy 2868 2910 -1682 7 616 548 122 19 9 chrUextra 4081059 4081167 -24923489 - ARS406_DM Unknown Unknown -202 151 43 7 616 3272 182 29 11 chrUextra 4081163 4081989 -24922667 + SAR_DM Satellite Satellite 191 1031 -441 7 616 3607 194 13 18 chrUextra 4082098 4083023 -24921633 - SAR_DM Satellite Satellite -300 1172 253 7 616 6247 93 29 15 chrUextra 4083123 4084055 -24920601 - Gypsy12_I LTR Gypsy -71 5475 4531 7 616 2772 220 20 20 chrUextra 4085187 4086069 -24918587 + SAR_DM Satellite Satellite 383 1264 -208 7 616 781 121 7 21 chrUextra 4085975 4086119 -24918537 - ARS406_DM Unknown Unknown -166 187 46 7 616 3302 11 0 27 chrUextra 4086219 4086664 -24917992 + DM176_I LTR Gypsy 2398 2830 -3590 7 616 4165 8 0 0 chrUextra 4086653 4087151 -24917505 + DM176_I LTR Gypsy 3769 4266 -2154 7 616 905 9 0 9 chrUextra 4087251 4087362 -24917294 - MDG3_I LTR Gypsy -4876 110 1 7 616 2241 15 0 0 chrUextra 4087361 4087628 -24917028 - MDG3_LTR LTR Gypsy 0 267 1 7 616 4577 18 0 4 chrUextra 4087628 4088183 -24916473 + Gypsy2_I LTR Gypsy 5335 5887 -248 7 616 590 118 0 0 chrUextra 4088285 4088378 -24916278 + Gypsy6A_LTR LTR Gypsy 210 302 -118 7 616 33 25 0 0 chrUextra 4088605 4088645 -24916011 + AT_rich Low_complexity Low_complexity 1 40 0 7 616 2370 14 14 0 chrUextra 4089316 4089600 -24915056 + R1_DM LINE R1 5069 5356 0 7 616 1826 63 8 0 chrUextra 4089633 4089886 -24914770 + R1_DM LINE R1 1 255 -5101 7 616 1786 54 0 4 chrUextra 4089887 4090130 -24914526 + R1_DM LINE R1 374 615 -4741 7 616 1030 15 8 15 chrUextra 4090114 4090247 -24914409 + R1_DM LINE R1 1938 2069 -3287 7 616 2471 85 34 26 chrUextra 4090347 4091279 -24913377 + DMSAT6 Satellite Satellite 1 940 -51 7 616 6192 18 1 1 chrUextra 4091379 4092119 -24912537 + R2_DM LINE R2 2535 3274 -333 7 616 1450 17 0 0 chrUextra 4092139 4092311 -24912345 + LSU-rRNA_Dme rRNA rRNA 2582 2753 -1147 7 616 21 89 0 0 chrUextra 4092560 4092616 -24912040 + AT_rich Low_complexity Low_complexity 1 56 0 7 616 21 57 0 0 chrUextra 4092654 4092689 -24911967 + AT_rich Low_complexity Low_complexity 1 35 0 7 616 26 30 0 0 chrUextra 4092735 4092768 -24911888 + AT_rich Low_complexity Low_complexity 1 33 0 7 616 1595 34 0 14 chrUextra 4093135 4093343 -24911313 - PROTOP DNA P 0 4480 4276 7 616 3076 156 101 69 chrUextra 4093443 4094374 -24910282 + G_DM LINE Jockey 695 1655 -2691 7 616 6124 83 46 3 chrUextra 4095505 4096436 -24908220 + TART_B1 LINE telomeric 2348 3318 -7336 7 616 7421 19 8 0 chrUextra 4096536 4097467 -24907189 + STALKER4_I LTR Gypsy 2653 3590 -2940 7 616 987 32 0 0 chrUextra 4098106 4098229 -24906427 + (CAAGA)n Simple_repeat Simple_repeat 4 126 0 7 616 4286 12 0 0 chrUextra 4099021 4099529 -24905127 - Copia2_I LTR Copia -2288 1874 1367 7 616 4800 2 7 0 chrUextra 4099629 4100190 -24904466 + DMRT1B LINE R1 4619 5183 0 7 616 1582 26 0 0 chrUextra 4100196 4100386 -24904270 - R1_DM LINE R1 -760 4596 4407 7 616 1266 13 0 0 chrUextra 4100407 4100560 -24904096 - R1_DM LINE R1 -1074 4282 4130 7 616 4245 27 2 0 chrUextra 4100660 4101186 -24903470 + FW_DM LINE Jockey 4166 4692 0 7 616 2877 44 98 0 chrUextra 4101180 4101588 -24903068 + Gypsy7_I LTR Gypsy 1489 1936 -3048 7 616 3111 191 46 14 chrUextra 4101691 4102622 -24902034 + SAR_DM Satellite Satellite 1 960 -216 7 616 235 167 0 0 chrUextra 4102722 4102770 -24901886 - ARS406_DM Unknown Unknown -305 48 1 7 616 3685 180 27 20 chrUextra 4102731 4103650 -24901006 + SAR_DM Satellite Satellite 247 1172 -300 7 616 2312 100 30 29 chrUextra 4104815 4105715 -24898941 - DMSAT6 Satellite Satellite 0 900 1 7 616 4724 0 4 0 chrUextra 4105815 4106370 -24898286 + Copia_I LTR Copia 1128 1684 -2909 7 616 3249 5 0 0 chrUextra 4106358 4106746 -24897910 + Copia_I LTR Copia 2041 2428 -2165 7 616 2526 96 25 56 chrUextra 4106846 4107289 -24897367 - TART LINE telomeric -8726 5751 5323 7 616 1598 147 49 18 chrUextra 4107269 4107595 -24897061 - TART LINE telomeric -10594 3883 3548 7 616 1247 6 90 0 chrUextra 4107593 4107749 -24896907 - PROTOP DNA P -4310 170 1 7 616 7328 29 28 3 chrUextra 4107877 4108808 -24895848 - G2_DM LINE Jockey -1201 1901 948 7 616 3555 188 28 18 chrUextra 4108913 4109839 -24894817 - SAR_DM Satellite Satellite -425 934 1 7 616 6897 42 26 8 chrUextra 4109939 4110870 -24893786 - R1_DM LINE R1 -4302 1054 107 7 616 2958 182 6 6 chrUextra 4110972 4111892 -24892764 - SAR_DM Satellite Satellite -658 920 1 7 616 313 118 188 14 chrUextra 4112001 4112070 -24892586 - Gypsy8_I LTR Gypsy -3330 1017 937 7 616 1403 88 15 0 chrUextra 4112065 4112269 -24892387 - Gypsy8_I LTR Gypsy -3867 480 274 7 616 2135 87 12 48 chrUextra 4112237 4112930 -24891726 + DMSAT6 Satellite Satellite 1 667 -151 7 616 2229 7 4 0 chrUextra 4113033 4113308 -24891348 + Copia_LTR LTR Copia 1 276 0 7 616 433 0 0 0 chrUextra 4113308 4113358 -24891298 + Copia_I LTR Copia 1 50 -4543 7 616 5228 5 0 2 chrUextra 4113356 4113963 -24890693 - POGO DNA Pogo -1418 703 98 7 616 728 46 0 115 chrUextra 4114370 4114492 -24890164 + Baggins1 LINE LOA 5346 5453 0 7 616 408 88 0 0 chrUextra 4114937 4114994 -24889662 + Baggins1 LINE LOA 4791 4847 -606 7 616 474 233 43 8 chrUextra 4115271 4115388 -24889268 - HETRP_DM Satellite Satellite -203 1669 1549 7 616 315 49 0 0 chrUextra 4115388 4115429 -24889227 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 616 547 192 8 16 chrUextra 4115587 4115709 -24888947 - HETRP_DM Satellite Satellite -203 1669 1549 7 616 315 49 0 0 chrUextra 4115709 4115750 -24888906 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 616 514 226 0 9 chrUextra 4115908 4116024 -24888632 - HETRP_DM Satellite Satellite -203 1669 1555 7 616 1054 146 142 0 chrUextra 4116125 4116358 -24888298 + MAX_LTR LTR Pao 56 321 0 7 616 2070 34 3 88 chrUextra 4116358 4116677 -24887979 + MAX_I LTR Pao 1 292 -7622 7 616 3190 199 28 17 chrUextra 4117156 4118073 -24886583 - SAR_DM Satellite Satellite -308 1164 238 7 616 2266 106 34 14 chrUextra 4118199 4119083 -24885573 - DMSAT6 Satellite Satellite -19 902 1 7 616 2102 0 0 4 chrUextra 4119218 4119461 -24885195 - TABOR_LTR LTR Gypsy -264 242 1 7 616 5316 12 7 4 chrUextra 4119461 4120149 -24884507 - STALKER4_I LTR Gypsy -118 6412 5723 7 616 3627 198 10 12 chrUextra 4120249 4121150 -24883506 - SAR_DM Satellite Satellite -1094 899 1 7 616 733 114 0 8 chrUextra 4121056 4121180 -24883476 + ARS406_DM Unknown Unknown 1 123 -230 7 616 2525 143 28 21 chrUextra 4121289 4121823 -24882833 + SAR_DM Satellite Satellite 366 903 -569 7 616 1730 167 3 14 chrUextra 4121838 4122209 -24882447 + SAR_DM Satellite Satellite 496 862 -610 7 616 3738 173 21 25 chrUextra 4122315 4123233 -24881423 - SAR_DM Satellite Satellite -313 1159 246 7 616 256 146 0 0 chrUextra 4123193 4123241 -24881415 + ARS406_DM Unknown Unknown 1 48 -305 7 616 5705 5 0 0 chrUextra 4123341 4124007 -24880649 - FW_DM LINE Jockey -4012 680 15 7 616 1247 174 4 11 chrUextra 4124003 4124032 -24880624 - SAR_DM Satellite Satellite -441 1031 938 7 616 1248 90 0 0 chrUextra 4124032 4124221 -24880435 + ARS406_DM Unknown Unknown 1 189 -164 7 616 1247 174 4 11 chrUextra 4124221 4124271 -24880385 - SAR_DM Satellite Satellite -441 937 766 7 616 7185 33 16 10 chrUextra 4124371 4125301 -24879355 + BATUMI_I LTR Pao 1472 2407 -5556 7 616 7140 25 3 0 chrUextra 4125401 4126277 -24878379 + DIVER2_I LTR Pao 3269 4147 0 7 616 428 38 0 0 chrUextra 4126277 4126330 -24878326 + DIVER2_LTR LTR Pao 1 53 -332 7 616 4926 3 2 2 chrUextra 4126431 4127005 -24877651 + LSU-rRNA_Dme rRNA rRNA 2113 2686 -1214 7 616 2902 6 3 6 chrUextra 4127002 4127361 -24877295 + R1_DM LINE R1 852 1209 -4147 7 616 3866 0 0 2 chrUextra 4127461 4127914 -24876742 - HETA LINE telomeric -3854 2227 1776 7 616 1113 55 0 12 chrUextra 4127914 4128079 -24876577 - TAHRE LINE telomeric -12 10451 10289 7 616 2067 8 0 11 chrUextra 4128080 4128333 -24876323 - TART LINE telomeric -6439 8038 7786 7 616 348 43 0 0 chrUextra 4128333 4128379 -24876277 + (CTTTA)n Simple_repeat Simple_repeat 3 48 0 7 616 3548 188 23 19 chrUextra 4128492 4129417 -24875239 + SAR_DM Satellite Satellite 321 1248 -224 7 616 6866 53 5 0 chrUextra 4130551 4131481 -24873175 - STALKER4_I LTR Gypsy -340 6190 5256 7 616 7475 27 13 0 chrUextra 4131581 4132511 -24872145 - R1_DM LINE R1 -2135 3221 2280 7 616 472 34 0 0 chrUextra 4132611 4132670 -24871986 - BATUMI_I LTR Pao -327 7636 7578 7 616 6185 60 16 1 chrUextra 4132657 4133541 -24871115 + MDG1_I LTR Gypsy 5303 6199 -397 7 616 680 0 0 0 chrUextra 4133641 4133720 -24870936 - ROO_LTR LTR Pao -349 79 1 7 616 2130 27 0 0 chrUextra 4134312 4134571 -24870085 + PROTOP_A DNA P 1 259 -846 7 616 7195 26 53 8 chrUextra 4134671 4135599 -24869057 - R1_DM LINE R1 -1476 3880 2911 7 616 4721 58 41 67 chrUextra 4135756 4136631 -24868025 + BATUMI_I LTR Pao 568 1419 -6544 7 616 3925 64 44 9 chrUextra 4136731 4137623 -24867033 + PROTOP_A DNA P 316 1105 0 7 616 3394 190 16 18 chrUextra 4137761 4138691 -24865965 + SAR_DM Satellite Satellite 1 928 -208 7 616 7527 11 10 3 chrUextra 4138791 4139721 -24864935 - G_DM LINE Jockey -1450 2896 1961 7 616 411 35 18 0 chrUextra 4139821 4139878 -24864778 - ARS406_DM Unknown Unknown -206 147 90 7 616 1987 186 17 8 chrUextra 4139883 4140739 -24863917 + SAR_DM Satellite Satellite 1 863 -532 7 616 3726 186 13 19 chrUextra 4140851 4141781 -24862875 - SAR_DM Satellite Satellite -439 924 1 7 616 2415 108 27 13 chrUextra 4141882 4142807 -24861849 - DMSAT6 Satellite Satellite -71 938 1 7 616 2811 76 80 13 chrUextra 4142911 4143511 -24861145 + Gypsy12_I LTR Gypsy 4907 5546 0 7 616 1475 183 15 25 chrUextra 4143510 4143835 -24860821 + Gypsy12_LTR LTR Gypsy 1 322 -2014 7 616 3199 218 17 32 chrUextra 4143941 4145898 -24858758 - SAR_DM Satellite Satellite -620 1926 1 7 616 1579 5 0 11 chrUextra 4145998 4146189 -24858467 - DIVER_I LTR Pao -5454 189 1 7 616 1927 5 0 0 chrUextra 4146210 4146434 -24858222 - DIVER_LTR LTR Pao 0 224 1 7 616 6815 40 43 0 chrUextra 4148056 4148985 -24855671 + ZAM_I LTR Gypsy 2595 3563 -3927 7 616 2207 8 0 0 chrUextra 4149085 4149346 -24855310 + MAX_I LTR Pao 7654 7914 0 7 616 2740 9 0 0 chrUextra 4149346 4149667 -24854989 + MAX_LTR LTR Pao 1 321 0 7 616 464 111 133 0 chrUextra 4149667 4149751 -24854905 + MAX_I LTR Pao 1097 1192 -6722 7 616 401 126 213 150 chrUextra 4149760 4150013 -24854643 + MAX_I LTR Pao 1056 1324 -6590 7 616 460 279 36 60 chrUextra 4150125 4150473 -24854183 - DM297_I LTR Gypsy -3004 3416 2675 7 616 1523 23 19 0 chrUextra 4150473 4150687 -24853969 - TLD2 Unknown Unknown 0 218 1 7 616 460 279 36 60 chrUextra 4150687 4150733 -24853923 - DM297_I LTR Gypsy -3004 2674 2573 7 616 543 324 1 1 chrUextra 4151777 4151990 -24852666 - MICROPIA_I LTR Gypsy -626 3850 3662 7 616 6944 42 21 13 chrUextra 4152175 4153099 -24851557 - DMCR1A LINE CR1 -1955 2515 1585 7 616 5934 4 28 0 chrUextra 4153201 4153908 -24850748 - DMRT1A LINE R1 -3177 2006 1280 7 616 1727 19 5 5 chrUextra 4153913 4154130 -24850526 + FW_DM LINE Jockey 3229 3445 -1247 7 616 7661 5 15 1 chrUextra 4154230 4155159 -24849497 + DM176_I LTR Gypsy 2989 3930 -2490 7 616 2634 134 12 20 chrUextra 4155260 4155754 -24848902 + TAHRE LINE telomeric 9974 10463 0 7 616 2761 109 9 5 chrUextra 4155754 4156188 -24848468 + TART_B1 LINE telomeric 921 1356 -9298 7 616 2550 83 41 12 chrUextra 4156290 4157216 -24847440 - DMSAT6 Satellite Satellite -3 953 1 7 616 3475 192 11 16 chrUextra 4157317 4158245 -24846411 + SAR_DM Satellite Satellite 1 922 -216 7 616 3603 192 19 21 chrUextra 4158349 4159275 -24845381 - SAR_DM Satellite Satellite -425 924 1 7 616 7354 35 12 0 chrUextra 4159377 4160304 -24844352 + R1_DM LINE R1 1292 2229 -3127 7 616 1582 0 0 0 chrUextra 4160404 4160588 -24844068 - NOMAD_I LTR Gypsy -6388 184 1 7 616 4527 0 0 0 chrUextra 4160588 4161106 -24843550 - NOMAD_LTR LTR Gypsy 0 518 1 7 616 347 91 0 70 chrUextra 4161118 4161189 -24843467 + BATUMI_I LTR Pao 704 769 -7194 7 616 547 110 10 20 chrUextra 4161230 4161332 -24843324 + BATUMI_I LTR Pao 749 849 -7114 7 616 1555 132 80 6 chrUextra 4161433 4161745 -24842911 + Invader1_I LTR Gypsy 2852 3186 0 7 616 479 103 10 103 chrUextra 4161745 4161842 -24842814 + Invader1_LTR LTR Gypsy 1 88 -335 7 616 481 148 37 0 chrUextra 4161843 4161924 -24842732 + Invader1_LTR LTR Gypsy 340 423 0 7 616 1189 110 312 34 chrUextra 4161946 4162358 -24842298 + PROTOP DNA P 424 950 -3530 7 616 2469 174 88 12 chrUextra 4163491 4164419 -24840237 + Gypsy12_I LTR Gypsy 1016 2014 -3532 7 616 2579 3 0 0 chrUextra 4164520 4164817 -24839839 + LSU-rRNA_Dme rRNA rRNA 2288 2584 -1316 7 616 5623 2 0 0 chrUextra 4164810 4165449 -24839207 + R2_DM LINE R2 1043 1681 -1926 7 616 22 35 0 0 chrUextra 4165620 4165649 -24839007 + AT_rich Low_complexity Low_complexity 1 29 0 7 616 224 185 31 0 chrUextra 4165935 4166000 -24838656 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 616 262 47 14 72 chrUextra 4167428 4167497 -24837159 + (TAAAAA)n Simple_repeat Simple_repeat 2 66 0 7 616 40 21 0 0 chrUextra 4167972 4168019 -24836637 + AT_rich Low_complexity Low_complexity 1 47 0 7 616 1541 5 0 5 chrUextra 4168636 4168821 -24835835 - ROO_I LTR Pao -8072 184 1 7 616 3766 0 0 0 chrUextra 4168821 4169249 -24835407 - ROO_LTR LTR Pao 0 428 1 7 616 2751 9 0 0 chrUextra 4169249 4169565 -24835091 + IVK_DM LINE I 3264 3579 -1823 7 616 1041 96 0 0 chrUextra 4169668 4169846 -24834810 + (ACATG)n Simple_repeat Simple_repeat 3 180 0 7 616 1004 96 0 6 chrUextra 4169852 4170030 -24834626 + (CAAGA)n Simple_repeat Simple_repeat 4 180 0 7 616 1041 96 0 0 chrUextra 4170030 4170567 -24834089 + (ACATG)n Simple_repeat Simple_repeat 1 537 0 7 616 2562 23 0 0 chrUextra 4170694 4171004 -24833652 - STALKER4_LTR LTR Gypsy -92 310 1 7 616 4279 25 33 3 chrUextra 4171004 4171612 -24833044 - STALKER4_I LTR Gypsy 0 6530 5905 7 616 313 0 0 0 chrUextra 4171724 4171765 -24832891 - NTS_DM Other Other -125 115 75 7 616 1217 13 0 7 chrUextra 4171760 4171912 -24832744 - NTS_DM Other Other -89 151 1 7 616 1799 17 17 13 chrUextra 4171912 4172151 -24832505 - NTS_DM Other Other 0 240 1 7 616 284 0 75 57 chrUextra 4172151 4172204 -24832452 - NTS_DM Other Other 0 240 187 7 616 269 30 0 0 chrUextra 4172204 4172237 -24832419 - NTS_DM Other Other -206 34 2 7 616 295 308 65 14 chrUextra 4172371 4172648 -24832008 + G6_DM LINE Jockey 246 536 -1506 7 616 4404 0 2 0 chrUextra 4172752 4173275 -24831381 + TABOR_I LTR Gypsy 490 1013 -5323 7 616 1937 108 59 64 chrUextra 4173275 4173681 -24830975 - Gypsy6_LTR LTR Gypsy -3 404 1 7 616 246 150 0 0 chrUextra 4173853 4173893 -24830763 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 616 238 235 0 0 chrUextra 4173945 4173996 -24830660 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 616 246 150 0 0 chrUextra 4174036 4174076 -24830580 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 616 29 28 0 0 chrUextra 4174081 4174117 -24830539 + AT_rich Low_complexity Low_complexity 1 36 0 7 616 4483 0 2 0 chrUextra 4174197 4174709 -24829947 - LSU-rRNA_Dme rRNA rRNA 0 3900 3388 7 616 343 129 14 14 chrUextra 4174809 4174880 -24829776 + ARS406_DM Unknown Unknown 119 189 -164 7 616 3372 188 31 29 chrUextra 4174836 4175737 -24828919 - SAR_DM Satellite Satellite -261 903 1 7 616 322 178 50 101 chrUextra 4175896 4176015 -24828641 - Copia_I LTR Copia -80 4513 4401 7 616 1320 198 50 7 chrUextra 4176465 4176765 -24827891 + HETA LINE telomeric 4031 4343 -1738 7 616 4399 24 2 4 chrUextra 4177893 4178443 -24826213 - ACCORD2_I LTR Gypsy -1522 5690 5142 7 616 3253 10 0 0 chrUextra 4178437 4178821 -24825835 - ACCORD2_I LTR Gypsy -2371 4841 4458 7 616 3719 191 12 21 chrUextra 4178921 4179849 -24824807 + SAR_DM Satellite Satellite 1 920 -216 7 616 647 36 342 0 chrUextra 4179951 4180062 -24824594 - PROTOP DNA P -4331 149 1 7 616 310 89 0 0 chrUextra 4180065 4180110 -24824546 + DMRT1B LINE R1 5125 5169 -14 7 616 1400 149 35 0 chrUextra 4180308 4180569 -24824087 + Invader3_I LTR Gypsy 4491 4760 -128 7 616 994 137 191 0 chrUextra 4180597 4180801 -24823855 - Invader3_I LTR Gypsy -961 3927 3685 7 616 3828 183 14 21 chrUextra 4180977 4181905 -24822751 + SAR_DM Satellite Satellite 1 921 -208 7 616 1341 130 3 157 chrUextra 4182008 4182346 -24822310 - TART LINE telomeric -7207 7270 6985 7 616 437 45 88 15 chrUextra 4182346 4182414 -24822242 - TAHRE LINE telomeric -11 10452 10380 7 616 779 29 29 0 chrUextra 4182413 4182518 -24822138 - TART LINE telomeric -3814 10663 10556 7 616 1549 138 181 52 chrUextra 4182529 4182933 -24821723 - TART LINE telomeric -4201 10276 9821 7 616 5222 60 6 3 chrUextra 4183033 4183735 -24820921 - R1_DM LINE R1 -4652 704 1 7 616 1669 10 0 0 chrUextra 4183768 4183961 -24820695 - R1_DM LINE R1 0 5356 5164 7 616 3781 186 16 20 chrUextra 4184065 4184984 -24819672 + SAR_DM Satellite Satellite 1 916 -208 7 616 273 189 0 0 chrUextra 4185244 4185297 -24819359 + NOMAD_I LTR Gypsy 6520 6572 0 7 616 1112 135 136 47 chrUextra 4185645 4185924 -24818732 - DNAREP1_DM LINE Penelope -201 393 90 7 616 3568 39 0 0 chrUextra 4186117 4186576 -24818080 + G2_DM LINE Jockey 2070 2528 -574 7 616 1124 50 0 0 chrUextra 4186576 4186736 -24817920 - G2_DM LINE Jockey -9 3093 2934 7 616 1940 64 42 48 chrUextra 4186732 4187044 -24817612 + G2_DM LINE Jockey 2527 2836 -266 7 616 1732 104 16 60 chrUextra 4187147 4187463 -24817193 + Gypsy6A_LTR LTR Gypsy 1 302 -118 7 616 3008 22 0 0 chrUextra 4187514 4187876 -24816780 - PROTOP_A DNA P -743 362 1 7 616 6920 25 0 3 chrUextra 4188173 4189032 -24815624 + FW_DM LINE Jockey 3837 4692 0 7 616 7837 4 9 1 chrUextra 4189201 4190129 -24814527 + ACCORD_I LTR Gypsy 2916 3850 -2438 7 616 725 108 0 0 chrUextra 4190229 4190349 -24814307 - ARS406_DM Unknown Unknown -232 121 2 7 616 3607 178 14 15 chrUextra 4190254 4191140 -24813516 + SAR_DM Satellite Satellite 192 1076 -396 7 616 2473 87 29 26 chrUextra 4191257 4192185 -24812471 + DMSAT6 Satellite Satellite 1 930 -80 7 616 1030 0 0 0 chrUextra 4192285 4192402 -24812254 - BATUMI_I LTR Pao -7846 117 1 7 616 1968 26 30 15 chrUextra 4192402 4192670 -24811986 - BATUMI_LTR LTR Pao 0 272 1 7 616 21 0 0 0 chrUextra 4192807 4192828 -24811828 + AT_rich Low_complexity Low_complexity 1 21 0 7 616 697 21 0 0 chrUextra 4193313 4193407 -24811249 - QUASIMODO_I LTR Gypsy -474 5586 5493 7 616 5379 58 64 10 chrUextra 4193418 4194241 -24810415 - QUASIMODO_I LTR Gypsy -885 5175 4308 7 617 1777 5 0 0 chrUextra 4194341 4194546 -24810110 + DIVER_I LTR Pao 5439 5643 0 7 617 1915 5 0 0 chrUextra 4194546 4194770 -24809886 + DIVER_LTR LTR Pao 1 224 0 7 617 3385 38 0 2 chrUextra 4194788 4195212 -24809444 + ROO_LTR LTR Pao 6 428 0 7 617 41 58 0 0 chrUextra 4195557 4195626 -24809030 + AT_rich Low_complexity Low_complexity 1 69 0 7 617 477 81 207 0 chrUextra 4195966 4196053 -24808603 + DNAREP1_DM LINE Penelope 426 530 -64 7 617 752 140 115 72 chrUextra 4196421 4196629 -24808027 - TIRANT_LTR LTR Gypsy -200 217 1 7 617 932 41 16 0 chrUextra 4196899 4197021 -24807635 - Baggins1 LINE LOA -15 5438 5315 7 617 1681 37 124 0 chrUextra 4197017 4197258 -24807398 - Baggins1 LINE LOA -456 4997 4727 7 617 3105 204 29 10 chrUextra 4197425 4198353 -24806303 + SAR_DM Satellite Satellite 1 946 -208 7 617 852 91 0 12 chrUextra 4198461 4198625 -24806031 - RSP Satellite Satellite 0 162 1 7 617 836 72 0 15 chrUextra 4198664 4199062 -24805594 - RSP Satellite Satellite 0 392 1 7 617 804 96 0 14 chrUextra 4199102 4199381 -24805275 - RSP Satellite Satellite -1 275 1 7 617 3326 194 22 22 chrUextra 4199481 4200409 -24804247 - SAR_DM Satellite Satellite -488 984 57 7 617 26 50 0 0 chrUextra 4201177 4201217 -24803439 + AT_rich Low_complexity Low_complexity 1 40 0 7 617 3465 0 0 2 chrUextra 4201556 4201959 -24802697 - STALKER4_LTR LTR Gypsy 0 402 1 7 617 4195 18 2 0 chrUextra 4201959 4202465 -24802191 - PROTOP_A DNA P -588 517 11 7 617 1281 61 0 0 chrUextra 4202889 4203069 -24801587 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 617 527 48 0 12 chrUextra 4203593 4203678 -24800978 + NTS_DM Other Other 118 201 -39 7 617 21 57 0 0 chrUextra 4203678 4203713 -24800943 + AT_rich Low_complexity Low_complexity 1 35 0 7 617 832 9 9 27 chrUextra 4203739 4203850 -24800806 + NTS_DM Other Other 25 133 -107 7 617 735 0 0 0 chrUextra 4203850 4203935 -24800721 + NTS_DM Other Other 38 122 -118 7 617 3367 5 7 7 chrUextra 4203935 4204349 -24800307 - DM297_LTR LTR Gypsy 0 414 1 7 617 1394 12 0 0 chrUextra 4204349 4204521 -24800135 - DM297_I LTR Gypsy 0 6167 5996 7 617 2245 29 0 0 chrUextra 4204907 4205188 -24799468 + IDEFIX_I LTR Gypsy 1 281 -5347 7 617 2801 30 69 0 chrUextra 4205188 4205549 -24799107 + IDEFIX_I LTR Gypsy 1605 1990 -3638 7 617 3572 185 29 21 chrUextra 4205650 4206557 -24798099 - SAR_DM Satellite Satellite -313 1159 246 7 617 341 100 17 0 chrUextra 4206517 4206577 -24798079 + ARS406_DM Unknown Unknown 1 61 -292 7 617 4599 11 0 0 chrUextra 4206677 4207222 -24797434 - FW_DM LINE Jockey -1866 2826 2282 7 617 3217 10 0 0 chrUextra 4207220 4207604 -24797052 - FW_DM LINE Jockey -2787 1905 1522 7 617 885 123 0 0 chrUextra 4207705 4207884 -24796772 + (TA)n Simple_repeat Simple_repeat 2 180 0 7 617 4033 84 52 41 chrUextra 4207887 4208623 -24796033 - I_DM LINE I -3133 3098 2355 7 617 3326 62 61 18 chrUextra 4208731 4209239 -24795417 - QUASIMODO_I LTR Gypsy -1282 4778 4249 7 617 2654 61 8 3 chrUextra 4209239 4209601 -24795055 - Gypsy10_LTR LTR Gypsy 0 364 1 7 617 384 58 0 0 chrUextra 4209601 4209653 -24795003 - Gypsy10_I LTR Gypsy 0 5278 5227 7 617 3606 0 0 0 chrUextra 4209761 4210171 -24794485 + ROO_LTR LTR Pao 19 428 0 7 617 4374 8 0 0 chrUextra 4210171 4210685 -24793971 - IVK_DM LINE I -2134 3268 2755 7 617 3606 199 10 16 chrUextra 4210788 4211711 -24792945 - SAR_DM Satellite Satellite -224 1248 332 7 617 6875 31 0 52 chrUextra 4211815 4212739 -24791917 + R1_DM LINE R1 1254 2129 -3227 7 617 2195 134 12 15 chrUextra 4212839 4213766 -24790890 - DMSAT6 Satellite Satellite -102 924 1 7 617 7597 30 0 0 chrUextra 4213868 4214793 -24789863 - R1_DM LINE R1 -2565 2791 1867 7 617 6487 30 5 0 chrUextra 4215920 4216728 -24787928 + R1_DM LINE R1 4458 5269 -87 7 617 940 59 0 0 chrUextra 4216728 4216847 -24787809 + R1_DM LINE R1 1257 1375 -3981 7 617 754 98 0 0 chrUextra 4216947 4217069 -24787587 - ARS406_DM Unknown Unknown -231 122 1 7 617 3700 176 24 20 chrUextra 4216963 4217870 -24786786 + SAR_DM Satellite Satellite 180 1090 -382 7 617 7803 1 17 0 chrUextra 4217974 4218901 -24785755 - DM176_I LTR Gypsy -1687 4733 3791 7 617 6966 50 2 1 chrUextra 4219001 4219913 -24784743 - R1_DM LINE R1 -3806 1550 638 7 617 3359 191 19 18 chrUextra 4220028 4220952 -24783704 - SAR_DM Satellite Satellite -444 924 1 7 617 760 323 15 16 chrUextra 4221100 4221566 -24783090 + Gypsy4_I LTR Gypsy 2360 3243 -3769 7 617 615 12 24 0 chrUextra 4221495 4221580 -24783076 + TLD2 Unknown Unknown 1 87 -131 7 617 286 281 20 40 chrUextra 4221567 4221719 -24782937 + DM297_I LTR Gypsy 2878 2991 -3176 7 617 345 325 0 7 chrUextra 4221827 4221982 -24782674 + GTWIN_I LTR Gypsy 3254 3407 -3014 7 617 6152 1 0 11 chrUextra 4222082 4222863 -24781793 + STALKER4_I LTR Gypsy 5759 6530 0 7 617 1181 0 0 7 chrUextra 4222863 4223009 -24781647 + STALKER4_LTR LTR Gypsy 1 145 -257 7 617 23 68 0 0 chrUextra 4223163 4223207 -24781449 + AT_rich Low_complexity Low_complexity 1 44 0 7 617 21 89 0 0 chrUextra 4223245 4223301 -24781355 + AT_rich Low_complexity Low_complexity 1 56 0 7 617 543 40 0 0 chrUextra 4224136 4224210 -24780446 + ARS406_DM Unknown Unknown 85 158 -195 7 617 657 53 53 0 chrUextra 4224207 4224302 -24780354 + ARS406_DM Unknown Unknown 90 189 -164 7 617 1821 180 12 8 chrUextra 4224217 4225046 -24779610 - SAR_DM Satellite Satellite -569 832 1 7 617 327 0 0 0 chrUextra 4225163 4225200 -24779456 - Invader1_I LTR Gypsy -3149 37 1 7 617 3602 7 5 0 chrUextra 4225200 4225621 -24779035 - Invader1_LTR LTR Gypsy 0 423 1 7 617 218 212 15 0 chrUextra 4225692 4225758 -24778898 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 617 3505 196 11 28 chrUextra 4227220 4228144 -24776512 - SAR_DM Satellite Satellite -224 1248 341 7 617 3761 40 2 2 chrUextra 4228244 4229171 -24775485 + R1_DM LINE R1 1004 1974 -3382 7 617 568 51 0 0 chrUextra 4229290 4229369 -24775287 + G2_DM LINE Jockey 2935 3013 -89 7 617 3227 65 29 0 chrUextra 4229364 4229813 -24774843 - G2_DM LINE Jockey -114 2988 2527 7 617 1156 43 0 0 chrUextra 4229809 4229971 -24774685 + G2_DM LINE Jockey 2934 3095 -7 7 617 1644 66 0 0 chrUextra 4229971 4230198 -24774458 - G2_DM LINE Jockey -32 3070 2844 7 617 2057 48 149 4 chrUextra 4230298 4230917 -24773739 - PROTOP DNA P -238 867 296 7 617 264 188 0 0 chrUextra 4230917 4230981 -24773675 - Gypsy8_I LTR Gypsy -4054 293 230 7 617 3231 40 0 0 chrUextra 4231325 4231730 -24772926 - G5A_DM LINE Jockey -205 2636 2232 7 617 242 273 198 0 chrUextra 4231758 4231879 -24772777 + BURDOCK_I LTR Gypsy 1906 2050 -3810 7 617 864 248 42 11 chrUextra 4231873 4232158 -24772498 + BURDOCK_I LTR Gypsy 2155 2448 -3412 7 617 1881 58 39 0 chrUextra 4233019 4233279 -24771377 + Baggins1 LINE LOA 2000 2269 -3184 7 617 3439 189 15 28 chrUextra 4233381 4234288 -24770368 + SAR_DM Satellite Satellite 361 1256 -216 7 617 797 48 0 0 chrUextra 4234197 4234302 -24770354 - ARS406_DM Unknown Unknown -164 189 85 7 617 2004 141 76 22 chrUextra 4234498 4235117 -24769539 - Stalker2_I LTR Gypsy -5531 999 291 7 617 27 0 0 0 chrUextra 4235141 4235168 -24769488 + AT_rich Low_complexity Low_complexity 1 27 0 7 617 276 138 0 33 chrUextra 4235255 4235315 -24769341 - Stalker3_LTR LTR Gypsy 0 372 315 7 617 3212 8 28 0 chrUextra 4235433 4235827 -24768829 + TAHRE LINE telomeric 10051 10455 -8 7 617 3882 2 2 6 chrUextra 4235885 4236360 -24768296 + HETA LINE telomeric 454 926 -5155 7 617 3633 179 27 29 chrUextra 4236465 4237387 -24767269 - SAR_DM Satellite Satellite -314 1158 239 7 617 6526 22 42 31 chrUextra 4237487 4238350 -24766306 - CIRCE LINE Composite -5484 872 1 7 617 497 16 0 16 chrUextra 4238350 4238414 -24766242 - CIRCE LINE Composite 0 6356 6294 7 617 26 64 0 0 chrUextra 4238637 4238684 -24765972 + AT_rich Low_complexity Low_complexity 1 47 0 7 617 501 336 38 7 chrUextra 4238985 4239275 -24765381 - GTWIN_I LTR Gypsy -2883 3538 3162 7 617 1191 96 75 0 chrUextra 4239541 4239728 -24764928 - DNAREP1_DM LINE Penelope -30 564 364 7 617 291 250 45 0 chrUextra 4239815 4239903 -24764753 - DIVER2_I LTR Pao -34 4113 4022 7 617 898 125 113 5 chrUextra 4240109 4240294 -24764362 + DNAREP1_DM LINE Penelope 1 205 -389 7 617 23 0 0 0 chrUextra 4240352 4240375 -24764281 + AT_rich Low_complexity Low_complexity 1 23 0 7 617 7495 23 8 4 chrUextra 4240568 4241495 -24763161 + DMRT1A LINE R1 3342 4271 -912 7 617 2085 263 3 0 chrUextra 4241601 4242202 -24762454 + TOM_I LTR Gypsy 5006 5608 -504 7 617 1073 69 62 6 chrUextra 4242360 4242521 -24762135 - DMTOM1_LTR LTR Gypsy -150 260 91 7 617 3190 191 33 28 chrUextra 4242624 4243506 -24761150 + SAR_DM Satellite Satellite 384 1269 -203 7 617 813 146 0 0 chrUextra 4243403 4243547 -24761109 - ARS406_DM Unknown Unknown -164 189 46 7 617 3135 194 82 14 chrUextra 4243654 4244573 -24760083 - SAR_DM Satellite Satellite -208 1264 284 7 617 3468 187 12 17 chrUextra 4244673 4245599 -24759057 + SAR_DM Satellite Satellite 1 920 -216 7 617 4723 44 29 0 chrUextra 4245699 4246313 -24758343 - BS2 LINE Jockey -1368 3353 2722 7 617 686 277 13 13 chrUextra 4246313 4246617 -24758039 + Copia_I LTR Copia 1976 2279 -2314 7 617 584 53 0 0 chrUextra 4246727 4246802 -24757854 + FW_DM LINE Jockey 1898 1972 -2720 7 617 887 172 32 11 chrUextra 4246800 4246988 -24757668 + FW_DM LINE Jockey 2403 2594 -2098 7 617 4019 128 23 0 chrUextra 4246993 4247651 -24757005 + FW_DM LINE Jockey 3399 4071 -621 7 617 7711 14 0 4 chrUextra 4247751 4248675 -24755981 + FW_DM LINE Jockey 1896 2815 -1877 7 617 7389 20 17 2 chrUextra 4248777 4249703 -24754953 + NINJA_I LTR Pao 4989 5928 -83 7 617 3656 184 14 17 chrUextra 4249803 4250729 -24753927 - SAR_DM Satellite Satellite -443 923 1 7 617 27 73 0 0 chrUextra 4250892 4250947 -24753709 + AT_rich Low_complexity Low_complexity 1 55 0 7 617 1403 68 115 0 chrUextra 4251520 4251755 -24752901 + PROTOP DNA P 452 713 -3767 7 617 1091 27 6 45 chrUextra 4251855 4252011 -24752645 + G5A_DM LINE Jockey 2689 2838 -3 7 617 773 290 108 22 chrUextra 4252037 4252499 -24752157 - Gypsy7_I LTR Gypsy -3317 1667 1166 7 617 1469 33 0 6 chrUextra 4252598 4252781 -24751875 - PROTOP DNA P 0 4480 4299 7 617 520 208 0 0 chrUextra 4252887 4253012 -24751644 - ROVER-I_DM LTR Gypsy -470 6114 5990 7 617 1200 130 0 0 chrUextra 4253047 4253246 -24751410 - ROVER-I_DM LTR Gypsy -1276 5308 5110 7 617 3449 2 0 2 chrUextra 4253246 4253649 -24751007 + STALKER4_LTR LTR Gypsy 1 402 0 7 617 330 25 0 0 chrUextra 4253649 4253676 -24750980 + STALKER4_I LTR Gypsy 1 27 -6503 7 617 289 96 0 37 chrUextra 4253676 4253730 -24750926 + Stalker2_I LTR Gypsy 1 52 -7350 7 617 624 117 0 9 chrUextra 4253907 4254019 -24750637 - ARS406_DM Unknown Unknown -242 111 1 7 617 3602 189 7 10 chrUextra 4253925 4254810 -24749846 + SAR_DM Satellite Satellite 195 1076 -396 7 617 4544 33 58 1 chrUextra 4254933 4255859 -24748797 + MAX_I LTR Pao 2769 3747 -4167 7 617 1557 40 0 0 chrUextra 4255959 4256158 -24748498 - QUASIMODO_I LTR Gypsy -3578 2482 2284 7 617 5497 39 1 6 chrUextra 4256161 4256885 -24747771 - QUASIMODO_I LTR Gypsy -3933 2127 1407 7 617 2802 9 3 28 chrUextra 4256985 4257342 -24747314 - ROVER-LTR_DM LTR Gypsy -19 348 1 7 617 4681 9 2 0 chrUextra 4257354 4257911 -24746745 + QUASIMODO_LTR LTR Gypsy 1 558 -100 7 617 368 254 39 50 chrUextra 4258195 4258377 -24746279 + Gypsy12_LTR LTR Gypsy 899 1078 -1258 7 617 952 171 29 10 chrUextra 4258395 4258602 -24746054 + Gypsy12_LTR LTR Gypsy 1164 1374 -962 7 617 328 211 34 34 chrUextra 4258676 4258823 -24745833 + Gypsy12_LTR LTR Gypsy 1581 1727 -553 7 617 280 137 0 19 chrUextra 4258852 4258904 -24745752 + Gypsy12_LTR LTR Gypsy 2286 2336 0 7 617 3221 14 142 0 chrUextra 4259038 4259961 -24744695 - DMRT1B LINE R1 -2285 2898 1845 7 617 7831 4 0 2 chrUextra 4260061 4260986 -24743670 + TART LINE telomeric 12021 12943 -1534 7 617 376 121 0 0 chrUextra 4261092 4261150 -24743506 - HETRP_DM Satellite Satellite -286 1586 1529 7 617 679 199 0 7 chrUextra 4261319 4261461 -24743195 - HETRP_DM Satellite Satellite -203 1669 1529 7 617 626 200 7 14 chrUextra 4261603 4261745 -24742911 - HETRP_DM Satellite Satellite -203 1669 1529 7 617 249 240 20 30 chrUextra 4261912 4262011 -24742645 - HETRP_DM Satellite Satellite -203 1669 1572 7 617 5593 21 3 0 chrUextra 4262111 4262792 -24741864 - FW_DM LINE Jockey -1577 3115 2433 7 617 1994 20 0 4 chrUextra 4262791 4263036 -24741620 - FW_DM LINE Jockey -2561 2131 1888 7 617 2784 9 0 0 chrUextra 4263136 4263468 -24741188 + R1_DM LINE R1 3951 4282 -1074 7 617 4693 19 2 7 chrUextra 4263488 4264061 -24740595 + R1_DM LINE R1 4407 4976 -380 7 617 3574 199 20 20 chrUextra 4264164 4265086 -24739570 + SAR_DM Satellite Satellite 1 922 -208 7 617 1284 43 0 0 chrUextra 4265186 4265349 -24739307 - CIRCE LINE Composite -766 5590 5428 7 617 2532 79 67 35 chrUextra 4265429 4265862 -24738794 - CIRCE LINE Composite -929 5427 4981 7 617 4367 0 2 0 chrUextra 4266211 4266709 -24737947 + LSU-rRNA_Dme rRNA rRNA 3268 3766 -134 7 617 3560 0 0 2 chrUextra 4266709 4267136 -24737520 - POGO DNA Pogo 0 2121 1696 7 617 2147 4 0 8 chrUextra 4267236 4267496 -24737160 + BATUMI_I LTR Pao 7706 7963 0 7 617 1973 39 3 40 chrUextra 4267496 4267790 -24736866 + BATUMI_I LTR Pao 7002 7284 -679 7 617 1982 118 67 19 chrUextra 4268277 4268693 -24735963 - STALKER4_I LTR Gypsy -5531 999 564 7 617 4183 8 0 0 chrUextra 4268696 4269186 -24735470 - STALKER4_I LTR Gypsy -2559 3971 3482 7 617 4307 0 0 0 chrUextra 4270311 4270811 -24733845 + TAHRE LINE telomeric 9964 10463 0 7 617 889 158 68 73 chrUextra 4270810 4271236 -24733420 + HETA LINE telomeric 1 607 -5474 7 617 5860 6 1 1 chrUextra 4272362 4273045 -24731611 - R2_DM LINE R2 -2920 687 5 7 617 2113 4 0 0 chrUextra 4273042 4273286 -24731370 - LSU-rRNA_Dme rRNA rRNA -1369 2531 2288 7 617 1812 45 4 0 chrUextra 4273396 4273638 -24731018 - G5_DM LINE Jockey -12 4844 4602 7 617 2715 56 53 0 chrUextra 4273635 4274011 -24730645 - G5_DM LINE Jockey -489 4367 3972 7 617 21 0 0 0 chrUextra 4274042 4274063 -24730593 + AT_rich Low_complexity Low_complexity 1 21 0 7 617 7995 1 0 0 chrUextra 4274411 4275336 -24729320 - TABOR_I LTR Gypsy -1659 4677 3753 7 617 2959 174 6 11 chrUextra 4275441 4276361 -24728295 + SAR_DM Satellite Satellite 1 916 -562 7 617 8021 1 0 2 chrUextra 4276461 4277386 -24727270 - LSU-rRNA_Dme rRNA rRNA -954 2946 2024 7 617 29 47 0 0 chrUextra 4277520 4277563 -24727093 + AT_rich Low_complexity Low_complexity 1 43 0 7 617 21 89 0 0 chrUextra 4277601 4277657 -24726999 + AT_rich Low_complexity Low_complexity 1 56 0 7 617 743 295 41 55 chrUextra 4278540 4278956 -24725700 + Gypsy12_I LTR Gypsy 3823 4232 -1314 7 617 6749 27 5 16 chrUextra 4278613 4279435 -24725221 + CIRCE LINE Composite 1884 2696 -3660 7 617 1906 0 0 0 chrUextra 4279535 4279761 -24724895 + ROO_I LTR Pao 8031 8256 0 7 617 3893 5 0 0 chrUextra 4279761 4280189 -24724467 + ROO_LTR LTR Pao 1 428 0 7 617 226 0 0 0 chrUextra 4280189 4280220 -24724436 + NTS_DM Other Other 103 133 -107 7 617 1304 18 0 6 chrUextra 4280220 4280385 -24724271 + NTS_DM Other Other 38 201 -39 7 617 2533 0 0 4 chrUextra 4280559 4280838 -24723818 - ROO_LTR LTR Pao -150 278 1 7 617 3153 143 16 56 chrUextra 4280838 4281483 -24723173 + TART LINE telomeric 9615 10233 -4244 7 617 2610 100 30 13 chrUextra 4281583 4282507 -24722149 + DMSAT6 Satellite Satellite 1 939 -147 7 617 3555 189 28 13 chrUextra 4282612 4283530 -24721126 - SAR_DM Satellite Satellite -1049 931 1 7 617 7527 17 14 7 chrUextra 4283631 4284555 -24720101 + MDG3_I LTR Gypsy 2154 3084 -1902 7 617 1289 56 6 0 chrUextra 4284657 4284836 -24719820 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 617 198 150 0 0 chrUextra 4284836 4284876 -24719780 + (AGATG)n Simple_repeat Simple_repeat 2 41 0 7 617 1317 61 0 0 chrUextra 4284876 4285056 -24719600 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 617 472 35 0 0 chrUextra 4285679 4285736 -24718920 + ARS406_DM Unknown Unknown 133 189 -164 7 617 3887 183 14 19 chrUextra 4285686 4286582 -24718074 - SAR_DM Satellite Satellite -255 1217 326 7 617 3521 209 24 11 chrUextra 4286704 4287619 -24717037 + SAR_DM Satellite Satellite 246 1172 -300 7 617 3607 7 0 5 chrUextra 4287727 4288146 -24716510 + Stalker2_LTR LTR Gypsy 8 424 0 7 617 4568 2 2 0 chrUextra 4288146 4288651 -24716005 + DMRT1A LINE R1 3433 3938 -1245 7 617 5234 21 165 0 chrUextra 4288751 4289675 -24714981 + ROO_I LTR Pao 1501 2577 -5679 7 617 2397 107 28 49 chrUextra 4289775 4290699 -24713957 + DMSAT6 Satellite Satellite 1 904 -7 7 617 3971 4 0 9 chrUextra 4290799 4291251 -24713405 + GTWIN_LTR LTR Gypsy 48 495 0 7 617 1976 81 98 0 chrUextra 4291893 4292189 -24712467 + DNAREP1_DM LINE Penelope 261 585 -9 7 617 1244 133 226 13 chrUextra 4292442 4292747 -24711909 + DNAREP1_DM LINE Penelope 1 370 -224 7 617 8110 4 9 0 chrUextra 4292847 4293771 -24710885 + ROO_I LTR Pao 6304 7235 -1021 7 617 7977 24 1 0 chrUextra 4293871 4294795 -24709861 + R1_DM LINE R1 1525 2449 -2907 7 617 3889 224 18 22 chrUextra 4294903 4296841 -24707815 + SAR_DM Satellite Satellite 1 1931 -396 7 617 6497 50 43 5 chrUextra 4296943 4297862 -24706794 - DOC2_DM LINE Jockey -3177 1616 619 7 617 1285 189 134 57 chrUextra 4297967 4298354 -24706302 - TAHRE LINE telomeric -2823 7640 7224 7 617 3697 80 2 30 chrUextra 4298360 4298891 -24705765 - HETA LINE telomeric 0 6081 5566 7 617 3957 183 14 20 chrUextra 4298991 4299915 -24704741 + SAR_DM Satellite Satellite 1 918 -225 7 617 1547 6 0 6 chrUextra 4300016 4300197 -24704459 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 617 1547 13 0 4 chrUextra 4300231 4300462 -24704194 + (ATCG)n Simple_repeat Simple_repeat 1 230 0 7 617 1272 11 35 0 chrUextra 4300469 4300643 -24704013 + (CGATA)n Simple_repeat Simple_repeat 1 180 0 7 617 858 36 0 0 chrUextra 4300643 4300753 -24703903 + (CATA)n Simple_repeat Simple_repeat 1 110 0 7 617 1328 22 0 22 chrUextra 4300753 4300937 -24703719 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 617 3454 93 80 31 chrUextra 4301039 4301652 -24703004 - Gypsy12_I LTR Gypsy -4845 701 1 7 617 337 218 34 34 chrUextra 4301666 4301813 -24702843 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 7 617 285 185 37 0 chrUextra 4301864 4301945 -24702711 - Gypsy12_LTR LTR Gypsy -827 1509 1426 7 617 508 122 100 0 chrUextra 4302392 4302482 -24702174 + DNAREP1_DM LINE Penelope 496 594 0 7 617 26 50 0 0 chrUextra 4302534 4302574 -24702082 + AT_rich Low_complexity Low_complexity 1 40 0 7 617 3750 186 18 20 chrUextra 4303095 4303996 -24700660 - SAR_DM Satellite Satellite -203 1269 371 7 617 747 158 0 4 chrUextra 4304117 4304357 -24700299 - SAR_DM Satellite Satellite -800 238 1 7 617 2459 181 9 17 chrUextra 4304368 4304906 -24699750 - SAR_DM Satellite Satellite -396 1076 543 7 617 484 229 0 0 chrUextra 4304917 4305035 -24699621 - SAR_DM Satellite Satellite -396 1076 959 7 617 2640 93 53 17 chrUextra 4305135 4306059 -24698597 - DMSAT6 Satellite Satellite -84 956 1 7 617 3716 176 42 21 chrUextra 4306171 4307054 -24697602 + SAR_DM Satellite Satellite 369 1269 -203 7 617 967 69 0 0 chrUextra 4306951 4307082 -24697574 - ARS406_DM Unknown Unknown -164 189 59 7 617 1907 45 4 0 chrUextra 4307182 4307424 -24697232 + QUASIMODO_I LTR Gypsy 1887 2129 -3931 7 617 2675 37 0 0 chrUextra 4307425 4307752 -24696904 + QUASIMODO_I LTR Gypsy 2284 2610 -3450 7 617 1912 30 0 0 chrUextra 4307763 4307997 -24696659 + QUASIMODO_I LTR Gypsy 2669 2902 -3158 7 617 762 79 9 0 chrUextra 4307991 4308105 -24696551 + QUASIMODO_I LTR Gypsy 3168 3282 -2778 7 617 610 176 81 51 chrUextra 4308780 4308977 -24695679 + DMCR1A LINE CR1 4227 4429 -41 7 617 1145 14 7 14 chrUextra 4308984 4309128 -24695528 - Gypsy12_LTR LTR Gypsy -1400 936 794 7 617 8308 12 0 0 chrUextra 4309228 4310151 -24694505 - Gypsy6_I LTR Gypsy -625 6387 5465 7 617 1295 45 0 0 chrUextra 4310251 4310408 -24694248 - IDEFIX_LTR LTR Gypsy -95 499 343 7 617 5400 80 0 1 chrUextra 4310402 4311174 -24693482 - IDEFIX_I LTR Gypsy -334 5294 4524 7 617 460 332 39 46 chrUextra 4311738 4312143 -24692513 - Gypsy6_I LTR Gypsy -5228 1784 1437 7 617 1841 127 237 2 chrUextra 4312297 4312892 -24691764 + DMRT1B LINE R1 4107 4843 -340 7 617 24 0 0 0 chrUextra 4313194 4313218 -24691438 + AT_rich Low_complexity Low_complexity 1 24 0 7 617 2975 6 0 0 chrUextra 4313320 4313647 -24691009 + ROO_LTR LTR Pao 98 424 -4 7 617 1620 11 8 3 chrUextra 4313647 4314008 -24690648 + (TATAA)n Simple_repeat Simple_repeat 1 362 0 7 617 1805 49 0 0 chrUextra 4314017 4314243 -24690413 - DM1731_LTR LTR Copia -10 326 101 7 617 488 227 23 0 chrUextra 4314343 4314471 -24690185 + Gypsy12_LTR LTR Gypsy 1774 1904 -432 7 617 30 0 0 0 chrUextra 4314471 4314501 -24690155 + AT_rich Low_complexity Low_complexity 1 30 0 7 617 4085 49 17 2 chrUextra 4314527 4315054 -24689602 - DIVER2_I LTR Pao -1196 2951 2417 7 617 2117 178 11 14 chrUextra 4315372 4316286 -24688370 - SAR_DM Satellite Satellite -514 911 1 7 617 22 35 0 0 chrUextra 4316502 4316531 -24688125 + AT_rich Low_complexity Low_complexity 1 29 0 7 617 21 82 0 0 chrUextra 4316654 4316703 -24687953 + AT_rich Low_complexity Low_complexity 1 49 0 7 617 289 312 24 93 chrUextra 4316798 4317045 -24687611 + ACCORD2_I LTR Gypsy 526 755 -6457 7 617 611 199 15 0 chrUextra 4317069 4317187 -24687469 + ZAM_I LTR Gypsy 528 647 -6843 7 617 869 47 0 0 chrUextra 4317187 4317293 -24687363 + DMTOM1_LTR LTR Gypsy 1 106 -304 7 617 2606 113 25 21 chrUextra 4317412 4318335 -24686321 + DMSAT6 Satellite Satellite 1 926 -15 7 617 690 311 45 72 chrUextra 4318565 4319207 -24685449 + HMSBEAGLE_I LTR Gypsy 2322 2946 -3583 7 617 226 139 0 0 chrUextra 4320090 4320126 -24684530 + DNAREP1_DM LINE Penelope 196 231 -363 7 617 624 110 28 0 chrUextra 4320142 4320251 -24684405 - PROTOP_B DNA P -841 312 201 7 617 4306 10 8 0 chrUextra 4320481 4320968 -24683688 - FW_DM LINE Jockey -509 4183 3693 7 617 1693 35 12 87 chrUextra 4320959 4321213 -24683443 - Gypsy6_I LTR Gypsy -6460 552 318 7 617 1207 0 0 0 chrUextra 4321271 4321404 -24683252 - FW_DM LINE Jockey -923 3769 3637 7 617 35 0 0 0 chrUextra 4321506 4321541 -24683115 + AT_rich Low_complexity Low_complexity 1 35 0 7 617 24 32 0 0 chrUextra 4321620 4321651 -24683005 + AT_rich Low_complexity Low_complexity 1 31 0 7 617 3804 181 17 22 chrUextra 4322527 4323450 -24681206 + SAR_DM Satellite Satellite 1 917 -203 7 617 976 218 82 0 chrUextra 4323569 4323825 -24680831 - Invader3_I LTR Gypsy -2906 1982 1706 7 617 665 87 47 37 chrUextra 4323825 4323932 -24680724 - PROTOP_B DNA P 0 1153 1046 7 617 240 94 0 0 chrUextra 4323933 4323965 -24680691 - Invader3_I LTR Gypsy -3417 1471 1440 7 617 1907 226 105 10 chrUextra 4323969 4324465 -24680191 - Invader3_I LTR Gypsy -4043 845 303 7 617 226 155 80 45 chrUextra 4324573 4324661 -24679995 - HETA LINE telomeric -5990 91 1 7 617 921 58 0 8 chrUextra 4324730 4324852 -24679804 - TART LINE telomeric -3818 10659 10539 7 617 4064 13 2 0 chrUextra 4324852 4325320 -24679336 - PROTOP_A DNA P 0 1105 637 7 77 1459 17 6 6 chrUextra 4325315 4325495 -24679161 - PROTOP_B DNA P -623 530 351 7 618 3624 194 13 16 chrUextra 4325596 4326518 -24678138 - SAR_DM Satellite Satellite -467 919 1 7 618 7793 12 1 1 chrUextra 4326620 4327542 -24677114 - STALKER4_I LTR Gypsy -2767 3763 2842 7 618 1554 15 0 0 chrUextra 4327642 4327917 -24676739 + (TATAA)n Simple_repeat Simple_repeat 1 275 0 7 618 3345 101 19 10 chrUextra 4327922 4328466 -24676190 - G2_DM LINE Jockey -197 2905 2485 7 618 792 41 10 0 chrUextra 4328459 4328557 -24676099 - G2_DM LINE Jockey -976 2126 2028 7 618 5176 10 9 0 chrUextra 4328668 4329252 -24675404 - Copia2_I LTR Copia -1703 2459 1871 7 618 1950 4 100 0 chrUextra 4329688 4329928 -24674728 - Copia_I LTR Copia -4329 264 1 7 618 239 0 0 0 chrUextra 4329928 4329962 -24674694 - Copia_LTR LTR Copia 0 276 243 7 618 2377 4 0 0 chrUextra 4329962 4330238 -24674418 - Copia_LTR LTR Copia 0 276 1 7 618 1324 43 26 31 chrUextra 4330247 4330440 -24674216 - PROTOP DNA P -3883 597 406 7 618 423 100 0 0 chrUextra 4330456 4330526 -24674130 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 618 760 0 0 0 chrUextra 4330526 4330611 -24674045 + MDG1_LTR LTR Gypsy 87 171 -271 7 618 731 158 48 38 chrUextra 4330711 4330921 -24673735 + Stalker2_I LTR Gypsy 682 893 -6509 7 618 241 252 48 19 chrUextra 4331528 4331633 -24673023 + MDG1_I LTR Gypsy 1748 1855 -4741 7 618 8047 4 12 0 chrUextra 4331739 4332657 -24671999 + STALKER4_I LTR Gypsy 4308 5236 -1294 7 618 896 0 9 9 chrUextra 4332761 4332866 -24671790 + STALKER4_LTR LTR Gypsy 298 402 0 7 618 345 25 0 0 chrUextra 4332866 4332893 -24671763 + STALKER4_I LTR Gypsy 1 27 -6503 7 618 306 105 0 50 chrUextra 4332893 4332953 -24671703 + Stalker2_I LTR Gypsy 1 57 -7345 7 618 410 154 173 0 chrUextra 4333121 4333225 -24671431 + Stalker2_I LTR Gypsy 242 363 -7039 7 618 1979 115 99 40 chrUextra 4333225 4333679 -24670977 + STALKER4_I LTR Gypsy 732 1212 -5318 7 618 1621 42 5 31 chrUextra 4333779 4334003 -24670653 + BATUMI_I LTR Pao 7066 7283 -680 7 618 1205 24 12 12 chrUextra 4334003 4334170 -24670486 + (TTATA)n Simple_repeat Simple_repeat 5 171 0 7 618 3078 14 3 24 chrUextra 4334174 4334549 -24670107 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 618 1327 13 0 0 chrUextra 4334549 4334701 -24669955 - ROVER-I_DM LTR Gypsy 0 6584 6433 7 618 3654 0 0 0 chrUextra 4334801 4335199 -24669457 + TABOR_LTR LTR Gypsy 109 506 0 7 618 3804 9 0 18 chrUextra 4335199 4335653 -24669003 - DMRT1B LINE R1 -1978 3205 2760 7 618 588 14 0 0 chrUextra 4335654 4335723 -24668933 + (TTGTG)n Simple_repeat Simple_repeat 4 72 0 7 618 5900 62 70 18 chrUextra 4335858 4336745 -24667911 + PROTOP_B DNA P 1 933 -220 7 618 263 125 21 0 chrUextra 4337122 4337170 -24667486 + DNAREP1_DM LINE Penelope 288 336 -258 7 618 277 318 21 21 chrUextra 4337611 4337757 -24666899 + BURDOCK_I LTR Gypsy 865 997 -4863 7 618 3561 186 41 25 chrUextra 4337867 4338787 -24665869 + SAR_DM Satellite Satellite 296 1230 -242 7 618 3627 194 22 17 chrUextra 4338889 4339809 -24664847 - SAR_DM Satellite Satellite -444 924 1 7 618 3458 183 19 63 chrUextra 4339911 4340828 -24663828 + SAR_DM Satellite Satellite 201 1076 -396 7 618 4764 17 3 38 chrUextra 4340933 4341533 -24663123 + G_DM LINE Jockey 3768 4346 0 7 618 2646 46 12 0 chrUextra 4341528 4341855 -24662801 + FW_DM LINE Jockey 321 651 -4041 7 618 58 15 0 0 chrUextra 4342449 4342514 -24662142 + AT_rich Low_complexity Low_complexity 1 65 0 7 618 538 148 5 260 chrUextra 4342998 4343190 -24661466 + HOBO DNA hAT 131 273 -2743 7 618 1878 104 172 28 chrUextra 4343195 4343585 -24661071 + PROTOP_B DNA P 33 478 -675 7 618 2402 81 0 6 chrUextra 4343562 4343899 -24660757 + HOBO DNA hAT 330 664 -2352 7 618 3278 5 0 0 chrUextra 4343999 4344372 -24660284 - DOC LINE Jockey -2847 1878 1506 7 618 4117 23 4 69 chrUextra 4344370 4344921 -24659735 - Gypsy12_LTR LTR Gypsy -1226 1110 596 7 618 2162 8 0 0 chrUextra 4345021 4345259 -24659397 + PROTOP_B DNA P 922 1153 0 7 618 3165 21 119 0 chrUextra 4345259 4345771 -24658885 - R1_DM LINE R1 -2810 2546 1974 7 618 1468 29 0 0 chrUextra 4345771 4345943 -24658713 - R1_DM LINE R1 -3577 1779 1608 7 618 2893 3 94 0 chrUextra 4346043 4346424 -24658232 + LSU-rRNA_Dme rRNA rRNA 2233 2649 -1251 7 618 2857 9 0 0 chrUextra 4346426 4346744 -24657912 + R1_DM LINE R1 5039 5356 0 7 618 1960 5 0 0 chrUextra 4346750 4346965 -24657691 + LSU-rRNA_Dme rRNA rRNA 2640 2854 -1046 7 618 3390 223 22 16 chrUextra 4347065 4347982 -24656674 + SAR_DM Satellite Satellite 1 922 -203 7 618 8028 14 8 0 chrUextra 4348087 4349009 -24655647 + Copia2_I LTR Copia 919 1847 -2315 7 618 3739 191 9 16 chrUextra 4349119 4350007 -24654649 - SAR_DM Satellite Satellite -396 1076 195 7 618 722 85 0 25 chrUextra 4349911 4350031 -24654625 + ARS406_DM Unknown Unknown 1 117 -236 7 618 5611 92 81 10 chrUextra 4350131 4351001 -24653655 + Invader1_I LTR Gypsy 2207 3137 -49 7 618 3626 191 22 21 chrUextra 4351153 4352043 -24652613 + SAR_DM Satellite Satellite 374 1264 -208 7 618 232 62 0 0 chrUextra 4352043 4352075 -24652581 - ARS406_DM Unknown Unknown -195 158 127 7 618 1951 9 0 4 chrUextra 4352175 4352401 -24652255 + QUASIMODO_LTR LTR Gypsy 434 658 0 7 618 5845 3 10 33 chrUextra 4352401 4353097 -24651559 + QUASIMODO_I LTR Gypsy 1 680 -5380 7 618 8341 4 0 0 chrUextra 4353197 4354119 -24650537 + TART LINE telomeric 6323 7244 -7233 7 618 7626 38 7 1 chrUextra 4354219 4355141 -24649515 - R1_DM LINE R1 -1602 3754 2828 7 618 7551 26 17 0 chrUextra 4355241 4356163 -24648493 + PROTOP_A DNA P 86 1023 -82 7 618 34 24 0 0 chrUextra 4356787 4356828 -24647828 + AT_rich Low_complexity Low_complexity 1 41 0 7 618 21 95 0 0 chrUextra 4357041 4357104 -24647552 + AT_rich Low_complexity Low_complexity 1 63 0 7 618 615 0 0 0 chrUextra 4357116 4357184 -24647472 + LSU-rRNA_Dme rRNA rRNA 1 68 -3832 7 618 222 151 13 27 chrUextra 4358418 4358493 -24646163 + (TAAA)n Simple_repeat Simple_repeat 4 77 0 7 618 3538 5 0 0 chrUextra 4358813 4359226 -24645430 + IDEFIX_I LTR Gypsy 4266 4678 -950 7 618 3734 194 31 21 chrUextra 4359327 4360244 -24644412 + SAR_DM Satellite Satellite 1 925 -255 7 618 2306 15 0 0 chrUextra 4360347 4360615 -24644041 + QUASIMODO_I LTR Gypsy 1282 1549 -4511 7 618 5654 6 0 5 chrUextra 4360615 4361268 -24643388 + QUASIMODO_I LTR Gypsy 1883 2532 -3528 7 618 5170 25 0 0 chrUextra 4361368 4361967 -24642689 - R1_DM LINE R1 -2481 2875 2277 7 618 454 0 0 0 chrUextra 4361967 4362017 -24642639 + CIRCE LINE Composite 4931 4980 -1376 7 618 883 314 25 19 chrUextra 4362615 4363106 -24641550 + Gypsy4_I LTR Gypsy 2024 2689 -3599 7 618 646 23 23 0 chrUextra 4363035 4363122 -24641534 + TLD2 Unknown Unknown 1 89 -129 7 618 315 281 20 40 chrUextra 4363107 4363259 -24641397 + DM297_I LTR Gypsy 2878 2991 -3176 7 618 644 227 6 31 chrUextra 4363414 4363573 -24641083 + HETRP_DM Satellite Satellite 1521 1675 -197 7 618 651 193 7 15 chrUextra 4363706 4363843 -24640813 + HETRP_DM Satellite Satellite 1529 1664 -208 7 618 661 205 12 49 chrUextra 4363965 4364129 -24640527 + HETRP_DM Satellite Satellite 1518 1675 -197 7 618 309 114 0 0 chrUextra 4364287 4364331 -24640325 + HETRP_DM Satellite Satellite 1529 1572 -300 7 618 3904 231 10 9 chrUextra 4364440 4365352 -24639304 + TABOR_I LTR Gypsy 3722 4634 -1702 7 618 5088 3 44 0 chrUextra 4365455 4366373 -24638283 - DOC LINE Jockey -844 3881 2924 7 618 1384 107 25 14 chrUextra 4366475 4366764 -24637892 + Gypsy2_I LTR Gypsy 5877 6126 -9 7 618 3183 11 0 0 chrUextra 4366765 4367118 -24637538 + Gypsy2_LTR LTR Gypsy 1 353 0 7 618 358 347 17 23 chrUextra 4367215 4367392 -24637264 + NOMAD_I LTR Gypsy 6053 6228 -344 7 618 4487 90 14 100 chrUextra 4367515 4368415 -24636241 + ROO_I LTR Pao 114 936 -7320 7 618 1566 17 2 2 chrUextra 4368515 4369057 -24635599 + (TTATA)n Simple_repeat Simple_repeat 1 542 0 7 618 3215 3 3 3 chrUextra 4369068 4369436 -24635220 + DM176_LTR LTR Gypsy 1 368 -139 7 618 7517 34 57 0 chrUextra 4369536 4370457 -24634199 - R1_DM LINE R1 -2718 2638 1666 7 618 622 171 81 51 chrUextra 4372297 4372494 -24632162 + DMCR1A LINE CR1 4227 4429 -41 7 618 7895 14 31 0 chrUextra 4372599 4373520 -24631136 - Copia2_I LTR Copia -2460 1702 753 7 618 2224 65 29 0 chrUextra 4373620 4373926 -24630730 - QUASIMODO_I LTR Gypsy -5716 344 30 7 618 2241 98 40 32 chrUextra 4373933 4374314 -24630342 - QUASIMODO_LTR LTR Gypsy -51 607 91 7 618 265 203 0 0 chrUextra 4374469 4374528 -24630128 - TIRANT_I LTR Gypsy -660 7032 6974 7 618 252 152 87 43 chrUextra 4374645 4374714 -24629942 - DM176_LTR LTR Gypsy -141 366 295 7 618 272 140 20 20 chrUextra 4374823 4374874 -24629782 - DM176_LTR LTR Gypsy -238 269 219 7 618 3945 19 0 65 chrUextra 4374981 4375490 -24629166 + MICROPIA_LTR LTR Gypsy 1 476 0 7 618 620 0 0 14 chrUextra 4375490 4375562 -24629094 + MICROPIA_I LTR Gypsy 1 71 -4405 7 618 299 162 104 24 chrUextra 4376115 4376279 -24628377 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 7 618 232 164 68 83 chrUextra 4376212 4376345 -24628311 + (TCTTG)n Simple_repeat Simple_repeat 3 133 0 7 618 319 141 135 0 chrUextra 4376338 4376494 -24628162 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 7 618 8154 0 0 1 chrUextra 4376683 4377604 -24627052 - ROO_I LTR Pao -2865 5391 4472 7 618 22 56 0 0 chrUextra 4378017 4378053 -24626603 + AT_rich Low_complexity Low_complexity 1 36 0 7 618 3483 22 10 2 chrUextra 4378207 4378622 -24626034 - PROTOP_A DNA P 0 1105 688 7 618 7860 25 1 1 chrUextra 4378725 4379646 -24625010 - R1_DM LINE R1 -2401 2955 2035 7 618 2442 171 12 8 chrUextra 4379747 4380254 -24624402 - SAR_DM Satellite Satellite -549 923 415 7 618 3484 19 0 0 chrUextra 4380254 4380667 -24623989 - MDG1_LTR LTR Gypsy 0 442 30 7 618 284 167 64 0 chrUextra 4381253 4381331 -24623325 + CT-rich Low_complexity Low_complexity 4 86 0 7 618 3520 21 180 2 chrUextra 4381788 4382320 -24622336 - DOC2_DM LINE Jockey -2601 2192 1566 7 618 2784 34 80 0 chrUextra 4382356 4382708 -24621948 - DMCR1A LINE CR1 0 4470 4091 7 618 1432 80 10 0 chrUextra 4382808 4383007 -24621649 - R1_DM LINE R1 -5155 201 1 7 618 940 53 0 0 chrUextra 4383040 4383154 -24621502 - R1_DM LINE R1 0 5356 5243 7 618 2052 17 4 0 chrUextra 4383151 4383387 -24621269 - R1_DM LINE R1 -290 5066 4830 7 618 2613 16 70 0 chrUextra 4383387 4383588 -24621068 + Stalker3_LTR LTR Gypsy 1 201 -171 7 618 207 0 0 0 chrUextra 4383588 4383611 -24621045 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 618 2613 16 70 0 chrUextra 4383611 4383724 -24620932 + Stalker3_LTR LTR Gypsy 202 335 -37 7 618 3624 215 21 12 chrUextra 4383828 4384747 -24619909 - SAR_DM Satellite Satellite -397 926 1 7 618 458 196 11 0 chrUextra 4384848 4384940 -24619716 - NTS_DM Other Other -147 93 1 7 618 295 106 21 0 chrUextra 4385031 4385078 -24619578 - NTS_DM Other Other -192 48 1 7 618 458 127 53 38 chrUextra 4385078 4385209 -24619447 - NTS_DM Other Other 0 240 108 7 618 817 132 7 0 chrUextra 4385217 4385353 -24619303 - NTS_DM Other Other -103 137 1 7 618 234 167 21 0 chrUextra 4385444 4385492 -24619164 - NTS_DM Other Other -191 49 1 7 618 1088 138 35 22 chrUextra 4385492 4385722 -24618934 - NTS_DM Other Other 0 240 8 7 618 369 95 0 0 chrUextra 4385868 4385931 -24618725 + (AATAG)n Simple_repeat Simple_repeat 2 64 0 7 618 1304 76 26 14 chrUextra 4385944 4386292 -24618364 + (AATAG)n Simple_repeat Simple_repeat 1 351 0 7 618 1346 81 10 4 chrUextra 4386307 4386788 -24617868 + (AATAG)n Simple_repeat Simple_repeat 1 484 0 7 618 8175 2 0 2 chrUextra 4387908 4388828 -24615828 - G_DM LINE Jockey -1249 3097 2180 7 618 7553 25 1 0 chrUextra 4388928 4389848 -24614808 + R1_DM LINE R1 3929 4849 -507 7 618 22 88 0 0 chrUextra 4390236 4390293 -24614363 + AT_rich Low_complexity Low_complexity 1 57 0 7 618 30 59 0 0 chrUextra 4390331 4390382 -24614274 + AT_rich Low_complexity Low_complexity 1 51 0 7 618 26 30 0 0 chrUextra 4390428 4390461 -24614195 + AT_rich Low_complexity Low_complexity 1 33 0 7 618 1910 52 15 0 chrUextra 4390596 4390867 -24613789 - PROTOP_A DNA P -592 513 239 7 618 3510 194 22 21 chrUextra 4390968 4391888 -24612768 + SAR_DM Satellite Satellite 293 1213 -259 7 618 6722 44 24 2 chrUextra 4393008 4393928 -24610728 - LSU-rRNA_Dme rRNA rRNA -2514 1386 447 7 618 903 41 26 26 chrUextra 4394028 4394179 -24610477 + NTS_DM Other Other 90 240 0 7 618 1258 19 0 18 chrUextra 4394179 4394344 -24610312 + NTS_DM Other Other 1 162 -78 7 618 488 119 36 0 chrUextra 4394454 4394538 -24610118 + NTS_DM Other Other 4 90 -150 7 618 28 48 0 0 chrUextra 4394811 4394853 -24609803 + AT_rich Low_complexity Low_complexity 1 42 0 7 618 1580 169 19 92 chrUextra 4395086 4395509 -24609147 - Gypsy3_LTR LTR Gypsy -6 392 1 7 618 1919 196 6 6 chrUextra 4395509 4395967 -24608689 - Gypsy3_I LTR Gypsy 0 6177 5892 7 618 432 116 0 21 chrUextra 4396068 4396219 -24608437 + RSP Satellite Satellite 1 147 -2 7 618 809 119 12 17 chrUextra 4396245 4396980 -24607676 + RSP Satellite Satellite 1 731 0 7 618 816 60 0 0 chrUextra 4397088 4397204 -24607452 + ARS406_DM Unknown Unknown 43 158 -195 7 618 1938 174 5 9 chrUextra 4397211 4398005 -24606651 - SAR_DM Satellite Satellite -569 791 1 7 618 519 90 0 196 chrUextra 4398163 4398301 -24606355 + DNAREP1_DM LINE Penelope 475 585 -9 7 618 21 0 0 0 chrUextra 4398386 4398407 -24606249 + AT_rich Low_complexity Low_complexity 1 21 0 7 618 281 194 40 0 chrUextra 4398502 4398580 -24606076 - PROTOP_A DNA P -981 124 43 7 618 908 70 5 17 chrUextra 4399186 4399584 -24605072 - RSP Satellite Satellite 0 393 1 7 618 2492 87 8 9 chrUextra 4399581 4400040 -24604616 - G6_DM LINE Jockey 0 2042 1739 7 618 1898 177 7 12 chrUextra 4400148 4400577 -24604079 + SAR_DM Satellite Satellite 602 1028 -444 7 618 27 0 0 0 chrUextra 4400577 4400604 -24604052 + AT_rich Low_complexity Low_complexity 1 27 0 7 618 4040 4 0 0 chrUextra 4400604 4401068 -24603588 - BS2 LINE Jockey 0 4721 4258 7 618 1292 285 117 17 chrUextra 4401217 4402005 -24602651 + MICROPIA_I LTR Gypsy 2697 3563 -913 7 618 3236 200 19 23 chrUextra 4402199 4403099 -24601557 - SAR_DM Satellite Satellite -208 1264 369 7 618 2348 111 25 27 chrUextra 4403208 4404103 -24600553 + DMSAT6 Satellite Satellite 1 893 -18 7 618 6424 21 48 14 chrUextra 4404291 4405148 -24599508 + STALKER4_I LTR Gypsy 1057 1942 -4588 7 618 1968 190 24 12 chrUextra 4405253 4406167 -24598489 + SAR_DM Satellite Satellite 1 925 -396 7 618 4471 122 30 65 chrUextra 4406267 4407186 -24597470 + BATUMI_I LTR Pao 3706 4592 -3371 7 618 1395 59 0 3 chrUextra 4407286 4407592 -24597064 + (CTTAT)n Simple_repeat Simple_repeat 1 305 0 7 618 3706 2 0 5 chrUextra 4407592 4408022 -24596634 - ROO_LTR LTR Pao 0 428 1 7 618 1453 6 6 0 chrUextra 4408022 4408205 -24596451 - ROO_I LTR Pao 0 8256 8073 7 618 3500 186 16 24 chrUextra 4408305 4409219 -24595437 - SAR_DM Satellite Satellite -245 1227 321 7 618 380 307 21 23 chrUextra 4409451 4409690 -24594966 + BURDOCK_I LTR Gypsy 842 1079 -5209 7 618 1026 188 24 20 chrUextra 4410352 4411262 -24593394 - SAR_DM Satellite Satellite -396 914 1 7 618 1713 0 0 0 chrUextra 4411362 4411568 -24593088 + DM176_I LTR Gypsy 2152 2357 -4063 7 618 4968 39 9 1 chrUextra 4411568 4412281 -24592375 + DM176_I LTR Gypsy 4473 5283 -1301 7 618 6829 28 55 8 chrUextra 4412381 4413298 -24591358 + ROO_I LTR Pao 4244 5203 -3053 7 618 7477 19 9 4 chrUextra 4413400 4414319 -24590337 - FW_DM LINE Jockey -2099 2593 1671 7 618 7492 25 13 0 chrUextra 4414419 4415338 -24589318 - R1_DM LINE R1 -15 5341 4411 7 618 231 218 38 47 chrUextra 4415971 4416077 -24588579 - Copia_I LTR Copia -81 4512 4408 7 618 21 0 0 0 chrUextra 4416151 4416172 -24588484 + AT_rich Low_complexity Low_complexity 1 21 0 7 618 6705 19 55 22 chrUextra 4416459 4417376 -24587280 + ROO_I LTR Pao 2995 3941 -4315 7 618 3567 15 7 0 chrUextra 4417476 4417932 -24586724 - STALKER4_I LTR Gypsy -4965 1565 1107 7 618 3476 20 73 26 chrUextra 4417930 4418393 -24586263 - CIRCE LINE Composite -3221 3135 2651 7 618 740 30 10 10 chrUextra 4419516 4419616 -24585040 - R1_DM LINE R1 -4154 1202 1103 7 618 4436 69 3 3 chrUextra 4419616 4420227 -24584429 - R1_DM LINE R1 -4745 611 1 7 618 1446 29 0 0 chrUextra 4420260 4420433 -24584223 - R1_DM LINE R1 0 5356 5184 7 618 4235 41 67 4 chrUextra 4420539 4421452 -24583204 - BATUMI_I LTR Pao -1543 6420 5451 7 618 3316 189 33 11 chrUextra 4421552 4422470 -24582186 - SAR_DM Satellite Satellite -684 939 1 7 618 535 308 33 39 chrUextra 4422832 4423486 -24581170 - GTWIN_I LTR Gypsy -2883 3538 2809 7 618 2835 6 0 0 chrUextra 4423590 4423917 -24580739 - SSU-rRNA_Dme rRNA rRNA -1668 327 1 7 618 32 0 0 0 chrUextra 4424049 4424081 -24580575 + AT_rich Low_complexity Low_complexity 1 32 0 7 618 28 48 0 0 chrUextra 4424409 4424451 -24580205 + AT_rich Low_complexity Low_complexity 1 42 0 7 618 3726 6 0 0 chrUextra 4424609 4425091 -24579565 - DM176_I LTR Gypsy -65 6355 5874 7 618 3685 0 0 0 chrUextra 4425087 4425528 -24579128 - DM176_I LTR Gypsy -1631 4789 4349 7 618 3088 50 125 0 chrUextra 4425628 4426173 -24578483 - DMCR1A LINE CR1 -908 3562 2950 7 618 1587 67 3 3 chrUextra 4426170 4426457 -24578199 + ROOA_I LTR Pao 4644 5005 -1844 7 618 219 125 0 0 chrUextra 4426458 4426498 -24578158 + (TA)n Simple_repeat Simple_repeat 1 40 0 7 618 303 22 43 0 chrUextra 4426501 4426547 -24578109 - DMCR1A LINE CR1 -2119 2351 2304 7 618 3057 0 0 0 chrUextra 4426647 4426993 -24577663 - ROO_LTR LTR Pao -82 346 1 7 618 698 0 12 0 chrUextra 4426993 4427078 -24577578 - ROO_I LTR Pao 0 8256 8171 7 618 3112 77 6 2 chrUextra 4427078 4427561 -24577095 + S_DM DNA Tc1 1 485 -1251 7 618 5106 42 14 4 chrUextra 4427669 4428455 -24576201 - STALKER4_I LTR Gypsy -1626 5776 4863 7 618 1161 7 0 7 chrUextra 4428447 4428585 -24576071 - STALKER4_I LTR Gypsy -2290 4240 4104 7 618 3897 27 6 0 chrUextra 4428688 4429169 -24575487 + R1_DM LINE R1 4873 5356 0 7 618 2783 67 62 0 chrUextra 4429202 4429604 -24575052 + R1_DM LINE R1 1 427 -4929 7 618 1402 0 6 0 chrUextra 4429704 4429878 -24574778 + ROO_I LTR Pao 8082 8256 0 7 618 3722 2 0 2 chrUextra 4429878 4430307 -24574349 + ROO_LTR LTR Pao 1 428 0 7 618 1599 16 0 0 chrUextra 4430316 4430623 -24574033 + (TATAA)n Simple_repeat Simple_repeat 1 307 0 7 618 1905 97 24 88 chrUextra 4430724 4431098 -24573558 + TART LINE telomeric 3013 3362 -11115 7 618 1942 164 31 78 chrUextra 4431093 4431640 -24573016 + TART LINE telomeric 3683 4029 -10448 7 618 2254 111 9 38 chrUextra 4431743 4432659 -24571997 - DMSAT6 Satellite Satellite -7 888 1 7 618 1635 115 0 19 chrUextra 4432760 4433018 -24571638 - Gypsy12_I LTR Gypsy -2483 3063 2811 7 618 1599 81 0 0 chrUextra 4433009 4433231 -24571425 - Gypsy12_I LTR Gypsy -2876 2670 2449 7 618 234 50 200 0 chrUextra 4433234 4433274 -24571382 - PROTOP_B DNA P -1105 48 1 7 618 3254 187 14 19 chrUextra 4433779 4434696 -24569960 + SAR_DM Satellite Satellite 1 912 -217 7 618 793 135 0 0 chrUextra 4434899 4435025 -24569631 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 7 618 295 109 0 0 chrUextra 4435124 4435170 -24569486 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 7 618 677 197 72 86 chrUextra 4435433 4435711 -24568945 - HMSBEAGLE_I LTR Gypsy -161 6368 6095 7 618 3387 185 32 20 chrUextra 4435831 4436725 -24567931 + SAR_DM Satellite Satellite 326 1230 -242 7 618 2199 43 0 0 chrUextra 4436832 4437108 -24567548 - R1_DM LINE R1 -3753 1603 1328 7 618 2631 40 3 11 chrUextra 4437105 4437456 -24567200 - R1_DM LINE R1 -4179 1177 830 7 618 2329 55 0 0 chrUextra 4437441 4437750 -24566906 - R1_DM LINE R1 -4744 612 304 7 618 3602 172 18 28 chrUextra 4437851 4438742 -24565914 + SAR_DM Satellite Satellite 237 1118 -354 7 618 362 194 18 27 chrUextra 4438657 4438768 -24565888 - XDMR_DM Unknown Unknown 0 360 251 7 618 524 90 45 0 chrUextra 4439060 4439203 -24565453 + TC1_DM DNA Tc1 1 196 -1470 7 618 4837 0 0 0 chrUextra 4439203 4439761 -24564895 - ACCORD_LTR LTR Gypsy 0 558 1 7 618 738 114 0 0 chrUextra 4439886 4440009 -24564647 - ARS406_DM Unknown Unknown -230 123 1 7 618 3622 184 11 10 chrUextra 4439916 4440797 -24563859 + SAR_DM Satellite Satellite 195 1076 -396 7 618 7569 9 12 7 chrUextra 4440904 4441822 -24562834 - FW_DM LINE Jockey -1934 2758 1836 7 618 1710 31 80 0 chrUextra 4442616 4442840 -24561816 + PROTOP DNA P 1 242 -4238 7 618 3437 24 5 2 chrUextra 4442940 4443361 -24561295 - Gypsy_LTR LTR Gypsy -60 422 1 7 618 4189 12 2 0 chrUextra 4443361 4443857 -24560799 - Gypsy_I LTR Gypsy 0 6507 6011 7 618 7223 16 0 2 chrUextra 4443958 4444874 -24559782 + QUASIMODO_I LTR Gypsy 4293 5206 -854 7 618 3555 199 19 10 chrUextra 4444978 4445892 -24558764 - SAR_DM Satellite Satellite -219 1253 332 7 618 5199 6 2 0 chrUextra 4445994 4446632 -24558024 - QUASIMODO_I LTR Gypsy -1504 4556 3918 7 618 2033 22 4 4 chrUextra 4446642 4446912 -24557744 - QUASIMODO_I LTR Gypsy -2545 3515 3246 7 618 1026 78 20 0 chrUextra 4447012 4447165 -24557491 - R1_DM LINE R1 -5200 156 1 7 618 913 53 0 0 chrUextra 4447198 4447312 -24557344 - R1_DM LINE R1 0 5356 5243 7 618 5124 19 13 0 chrUextra 4447309 4447930 -24556726 - R1_DM LINE R1 -290 5066 4438 7 618 2272 21 144 0 chrUextra 4448030 4448453 -24556203 - R1_DM LINE R1 -2899 2457 1974 7 618 3912 36 10 0 chrUextra 4448453 4448948 -24555708 - R1_DM LINE R1 -3577 1779 1280 7 618 4072 0 8 0 chrUextra 4449048 4449529 -24555127 - QUASIMODO_LTR LTR Gypsy -173 485 1 7 618 53 40 0 0 chrUextra 4449529 4449603 -24555053 + AT_rich Low_complexity Low_complexity 1 74 0 7 618 2673 0 0 12 chrUextra 4450066 4450394 -24554262 + BATUMI_I LTR Pao 7640 7963 0 7 618 2202 25 0 27 chrUextra 4450394 4450685 -24553971 + BATUMI_I LTR Pao 7002 7284 -679 7 618 2516 0 0 0 chrUextra 4450685 4450984 -24553672 - STALKER4_I LTR Gypsy -2856 3674 3376 7 618 188 86 0 28 chrUextra 4451710 4451746 -24552910 + (CAGAA)n Simple_repeat Simple_repeat 4 38 0 7 618 2445 88 42 33 chrUextra 4452106 4453018 -24551638 - DMSAT6 Satellite Satellite -3 920 1 7 618 4475 56 24 106 chrUextra 4453120 4454038 -24550618 - BATUMI_I LTR Pao -6626 1337 495 7 618 892 184 295 65 chrUextra 4454590 4455055 -24549601 - HETA LINE telomeric -371 5710 5139 7 618 3471 189 16 25 chrUextra 4455156 4456074 -24548582 - SAR_DM Satellite Satellite -264 1208 299 7 77 5112 78 34 28 chrUextra 4456174 4457092 -24547564 + STALKER4_I LTR Gypsy 449 1501 -5029 7 619 4265 19 0 0 chrUextra 4457192 4457707 -24546949 + DOC2_DM LINE Jockey 4278 4792 -1 7 619 4680 6 0 0 chrUextra 4458209 4458759 -24545897 - DM176_I LTR Gypsy -879 5541 4992 7 619 3286 0 0 0 chrUextra 4458752 4459126 -24545530 - DM176_I LTR Gypsy -5455 965 592 7 619 6475 52 19 3 chrUextra 4459226 4460143 -24544513 + R1_DM LINE R1 1922 3740 -1616 7 619 2605 0 0 0 chrUextra 4460243 4460549 -24544107 + G_DM LINE Jockey 4038 4343 -3 7 619 235 186 0 0 chrUextra 4460629 4460672 -24543984 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 7 619 226 103 25 25 chrUextra 4460813 4460853 -24543803 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 619 2050 0 0 0 chrUextra 4460926 4461160 -24543496 + G_DM LINE Jockey 1 234 -4112 7 619 6421 51 33 11 chrUextra 4461263 4462177 -24542479 + R1_DM LINE R1 301 1234 -4122 7 619 1521 17 0 0 chrUextra 4462774 4462954 -24541702 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 7 619 234 81 0 0 chrUextra 4462954 4462990 -24541666 + (ACTAG)n Simple_repeat Simple_repeat 4 40 0 7 619 6836 43 20 2 chrUextra 4463294 4464211 -24540445 + R1_DM LINE R1 172 1104 -4252 7 619 3104 231 57 40 chrUextra 4464311 4466245 -24538411 - SAR_DM Satellite Satellite -828 1967 1 7 619 790 0 0 0 chrUextra 4466347 4466438 -24538218 - DM176_I LTR Gypsy -6329 91 1 7 619 4293 8 0 0 chrUextra 4466438 4466945 -24537711 - DM176_LTR LTR Gypsy 0 507 1 7 619 472 58 0 232 chrUextra 4466947 4467059 -24537597 + DNAREP1_DM LINE Penelope 500 585 -9 7 619 21 0 0 0 chrUextra 4467144 4467165 -24537491 + AT_rich Low_complexity Low_complexity 1 21 0 7 619 291 232 0 0 chrUextra 4467872 4467941 -24536715 - BS2 LINE Jockey -507 4214 4146 7 619 22 0 0 0 chrUextra 4468214 4468236 -24536420 + AT_rich Low_complexity Low_complexity 1 22 0 7 619 7555 9 32 1 chrUextra 4468379 4469296 -24535360 + Copia2_I LTR Copia 448 1392 -2770 7 619 7195 45 0 3 chrUextra 4469397 4470313 -24534343 - BATUMI_I LTR Pao -2312 5651 4739 7 619 6970 19 64 1 chrUextra 4470413 4471330 -24533326 + ROO_I LTR Pao 2675 3649 -4607 7 619 3714 182 18 26 chrUextra 4471433 4472346 -24532310 + SAR_DM Satellite Satellite 1 905 -217 7 619 3452 185 17 22 chrUextra 4472450 4473346 -24531310 + SAR_DM Satellite Satellite 282 1172 -300 7 619 406 246 8 0 chrUextra 4473241 4473363 -24531293 - XDMR Unknown Unknown 0 361 239 7 619 2765 60 11 5 chrUextra 4473464 4473846 -24530810 - R1_DM LINE R1 -4972 384 1 7 619 762 43 0 0 chrUextra 4473879 4473973 -24530683 - R1_DM LINE R1 0 5356 5263 7 619 2767 27 110 0 chrUextra 4473972 4474381 -24530275 - R1_DM LINE R1 -301 5055 4602 7 619 3477 0 2 2 chrUextra 4474481 4474895 -24529761 + G2_DM LINE Jockey 2684 3097 -5 7 619 2627 59 57 0 chrUextra 4474891 4475263 -24529393 + PROTOP_A DNA P 713 1105 0 7 619 837 259 23 13 chrUextra 4475501 4475810 -24528846 - XDMR_DM Unknown Unknown -43 317 6 7 619 3407 229 31 37 chrUextra 4475544 4477431 -24527225 + SAR_DM Satellite Satellite 1 1874 -208 7 619 1658 68 26 57 chrUextra 4477531 4477795 -24526861 + Invader2_LTR LTR Gypsy 11 266 0 7 619 651 92 43 135 chrUextra 4477828 4477991 -24526665 + HMSBEAGLE_I LTR Gypsy 6219 6366 -163 7 619 251 105 0 0 chrUextra 4478201 4478239 -24526417 + HMSBEAGLE_I LTR Gypsy 6360 6397 -132 7 619 3531 192 12 17 chrUextra 4478550 4479463 -24525193 + SAR_DM Satellite Satellite 1 909 -208 7 619 597 4 0 136 chrUextra 4480149 4480474 -24524182 + (TTTTTA)n Simple_repeat Simple_repeat 1 280 0 7 619 3340 15 0 0 chrUextra 4480579 4480978 -24523678 - PROTOP_A DNA P -706 399 1 7 619 3194 26 0 2 chrUextra 4480978 4481495 -24523161 - Invader1_I LTR Gypsy -2007 1179 547 7 619 3608 188 12 18 chrUextra 4481595 4482495 -24522161 + SAR_DM Satellite Satellite 224 1118 -354 7 619 350 194 20 10 chrUextra 4482412 4482511 -24522145 - XDMR_DM Unknown Unknown 0 360 261 7 619 6250 46 12 44 chrUextra 4482611 4483527 -24521129 - BATUMI_I LTR Pao -4673 3290 2404 7 619 3520 10 0 0 chrUextra 4483627 4484036 -24520620 - DMRT1B LINE R1 -4774 409 1 7 619 2317 35 3 0 chrUextra 4484252 4484540 -24520116 + R1_DM LINE R1 4594 4882 -474 7 619 245 162 114 15 chrUextra 4484894 4485026 -24519630 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 7 619 269 174 96 30 chrUextra 4485047 4485213 -24519443 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 7 619 558 338 9 9 chrUextra 4485716 4486081 -24518575 - GTWIN_I LTR Gypsy -2883 3538 3119 7 619 347 296 33 28 chrUextra 4486213 4486425 -24518231 - DM176_I LTR Gypsy -3175 3245 3033 7 619 432 45 15 0 chrUextra 4486360 4486426 -24518230 - TLD2 Unknown Unknown 0 218 152 7 619 314 292 23 23 chrUextra 4486427 4486560 -24518096 - GTWIN_I LTR Gypsy -3725 2563 2431 7 619 290 116 26 115 chrUextra 4487001 4487079 -24517577 + TIRANT_I LTR Gypsy 1 71 -7621 7 619 305 190 20 20 chrUextra 4487691 4487793 -24516863 + XDMR_DM Unknown Unknown 259 360 0 7 619 3637 191 8 18 chrUextra 4487707 4488605 -24516051 - SAR_DM Satellite Satellite -354 1118 230 7 619 3477 190 16 18 chrUextra 4488728 4489622 -24515034 + SAR_DM Satellite Satellite 326 1217 -255 7 619 1257 7 0 0 chrUextra 4489723 4489875 -24514781 - Copia_I LTR Copia -4441 152 1 7 619 2297 0 0 0 chrUextra 4489875 4490151 -24514505 - Copia_LTR LTR Copia 0 276 1 7 619 244 128 0 21 chrUextra 4490259 4490307 -24514349 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 619 244 128 0 21 chrUextra 4490533 4490581 -24514075 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 619 320 302 32 32 chrUextra 4490855 4491074 -24513582 - DM176_I LTR Gypsy -3175 3245 3027 7 619 724 57 0 0 chrUextra 4491002 4491107 -24513549 - TLD2 Unknown Unknown 0 218 114 7 619 400 0 0 0 chrUextra 4491236 4491284 -24513372 - MAX_LTR LTR Pao -273 48 1 7 619 293 102 0 0 chrUextra 4491290 4491339 -24513317 - MAX_I LTR Pao -2 7912 7864 7 619 1781 161 0 0 chrUextra 4491337 4491654 -24513002 + HMSBEAGLE_I LTR Gypsy 5432 5748 -781 7 619 228 0 0 0 chrUextra 4491757 4491787 -24512869 + DMCR1A LINE CR1 306 335 -4135 7 619 6868 45 1 9 chrUextra 4491774 4492671 -24511985 + DMCR1A LINE CR1 2597 3486 -984 7 619 938 287 45 11 chrUextra 4492782 4493138 -24511518 - HMSBEAGLE_I LTR Gypsy -973 5556 5189 7 619 269 308 82 65 chrUextra 4493253 4493681 -24510975 - HMSBEAGLE_I LTR Gypsy -1567 4962 4528 7 619 2133 149 49 11 chrUextra 4493790 4494259 -24510397 + ROVER-I_DM LTR Gypsy 6098 6584 0 7 619 1760 111 71 28 chrUextra 4494259 4494611 -24510045 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 619 378 177 13 0 chrUextra 4494611 4494690 -24509966 + ROVER-I_DM LTR Gypsy 1 80 -6504 7 619 2134 8 4 0 chrUextra 4494803 4495062 -24509594 + IDEFIX_LTR LTR Gypsy 335 594 0 7 619 25 0 0 0 chrUextra 4495252 4495277 -24509379 + AT_rich Low_complexity Low_complexity 1 25 0 7 619 4640 23 0 0 chrUextra 4495818 4496389 -24508267 - FW_DM LINE Jockey -1594 3098 2528 7 619 2683 18 0 26 chrUextra 4496391 4496733 -24507923 - FW_DM LINE Jockey -2468 2224 1892 7 619 2245 185 79 65 chrUextra 4496833 4497744 -24506912 - TAHRE LINE telomeric -631 9832 9129 7 619 6678 58 9 7 chrUextra 4497848 4498763 -24505893 + R1_DM LINE R1 3 919 -4437 7 619 423 184 354 0 chrUextra 4498896 4499054 -24505602 + PROTOP_B DNA P 940 1153 0 7 619 233 132 0 0 chrUextra 4499054 4499092 -24505564 + PROTOP_B DNA P 1116 1153 0 7 619 445 183 11 0 chrUextra 4499454 4499547 -24505109 + Gypsy12A_LTR LTR Gypsy 2 95 -2185 7 619 579 37 146 0 chrUextra 4499548 4499630 -24505026 + PROTOP_B DNA P 1 94 -1059 7 619 1165 26 7 0 chrUextra 4499626 4499778 -24504878 + PROTOP_B DNA P 224 376 -777 7 619 957 8 0 16 chrUextra 4499878 4499999 -24504657 - DM1731_I LTR Copia -495 3481 3363 7 619 7116 18 0 0 chrUextra 4500000 4500793 -24503863 - DM1731_I LTR Copia -615 3361 2569 7 619 4627 11 21 0 chrUextra 4500893 4501455 -24503201 + Stalker2_I LTR Gypsy 578 1151 -6251 7 619 1077 8 0 0 chrUextra 4501677 4501808 -24502848 + Stalker2_I LTR Gypsy 1132 1262 -6140 7 619 2229 7 7 2 chrUextra 4502923 4503359 -24501297 - DMRT1B LINE R1 -3938 1245 713 7 619 479 0 0 0 chrUextra 4503360 4503414 -24501242 - QUASIMODO_LTR LTR Gypsy -604 54 1 7 619 3586 7 0 0 chrUextra 4503414 4503838 -24500818 - QUASIMODO_I LTR Gypsy 0 6060 5637 7 619 7833 16 16 0 chrUextra 4503938 4504853 -24499803 + Invader2_I LTR Gypsy 3049 3978 -614 7 619 3706 0 0 2 chrUextra 4504965 4505368 -24499288 - STALKER4_LTR LTR Gypsy 0 402 1 7 619 4116 26 40 2 chrUextra 4505368 4505868 -24498788 - ROOA_I LTR Pao -4457 2392 1874 7 619 1390 160 8 24 chrUextra 4505970 4506220 -24498436 - Gypsy12_LTR LTR Gypsy -2090 246 1 7 619 3046 75 72 21 chrUextra 4506219 4506883 -24497773 - Gypsy12_I LTR Gypsy 0 5546 4849 7 619 4017 7 0 0 chrUextra 4506983 4507430 -24497226 - QUASIMODO_LTR LTR Gypsy -211 447 1 7 619 1167 8 0 8 chrUextra 4507437 4507569 -24497087 - MICROPIA_LTR LTR Gypsy 0 476 346 7 619 1940 19 306 12 chrUextra 4507575 4507895 -24496761 - MICROPIA_I LTR Gypsy -1207 3269 2856 7 619 2749 44 97 0 chrUextra 4508010 4508473 -24496183 + R2_DM LINE R2 3094 3601 -6 7 619 2550 42 20 0 chrUextra 4508469 4508775 -24495881 + LSU-rRNA_Dme rRNA rRNA 2578 2889 -1011 7 619 1035 36 14 14 chrUextra 4508774 4508913 -24495743 + LSU-rRNA_Dme rRNA rRNA 1227 1365 -2535 7 619 23 0 0 0 chrUextra 4509148 4509171 -24495485 + AT_rich Low_complexity Low_complexity 1 23 0 7 619 1874 83 214 9 chrUextra 4510028 4510508 -24494148 + PROTOP_B DNA P 241 856 -297 7 619 3012 87 0 2 chrUextra 4510516 4510919 -24493737 - Jockey2 LINE Jockey -1608 1820 1419 7 619 2600 96 19 42 chrUextra 4511043 4511942 -24492714 - DMSAT6 Satellite Satellite -32 878 1 7 619 3853 167 16 39 chrUextra 4512064 4512973 -24491683 - SAR_DM Satellite Satellite -694 888 1 7 619 2107 15 53 11 chrUextra 4513078 4513342 -24491314 + BLASTOPIA_LTR LTR Gypsy 1 275 0 7 619 5960 0 1 0 chrUextra 4513342 4513988 -24490668 + BLASTOPIA_I LTR Gypsy 1 647 -3834 7 619 964 326 50 47 chrUextra 4514088 4514626 -24490030 - Gypsy4_I LTR Gypsy -2915 3373 2668 7 619 1627 28 19 0 chrUextra 4514626 4514840 -24489816 - TLD2 Unknown Unknown 0 218 1 7 619 964 326 50 47 chrUextra 4514840 4514988 -24489668 - Gypsy4_I LTR Gypsy -2915 2667 2471 7 619 2336 178 8 4 chrUextra 4515103 4515578 -24489078 + SAR_DM Satellite Satellite 293 769 -703 7 619 3898 7 0 5 chrUextra 4515582 4516016 -24488640 - IVK_DM LINE I 0 5402 4971 7 619 4053 188 16 22 chrUextra 4516116 4517030 -24487626 - SAR_DM Satellite Satellite -458 908 1 7 619 2405 21 3 7 chrUextra 4517130 4517420 -24487236 - R1_DM LINE R1 -1301 4055 3767 7 619 5362 32 2 2 chrUextra 4517410 4518042 -24486614 - R1_DM LINE R1 -1817 3539 2908 7 619 2457 110 17 31 chrUextra 4518156 4519058 -24485598 - DMSAT6 Satellite Satellite -3 889 1 7 619 7062 49 25 10 chrUextra 4519168 4520072 -24484584 + TART LINE telomeric 3098 4015 -10462 7 619 6391 3 0 0 chrUextra 4520172 4520858 -24483798 + LSU-rRNA_Dme rRNA rRNA 1947 2632 -1268 7 619 2050 4 9 0 chrUextra 4520858 4521086 -24483570 + R1_DM LINE R1 1 230 -5126 7 619 7609 28 38 7 chrUextra 4521186 4522100 -24482556 - R1_DM LINE R1 -2172 3184 2242 7 619 3825 188 15 19 chrUextra 4522200 4523114 -24481542 + SAR_DM Satellite Satellite 1 910 -216 7 619 1416 0 0 0 chrUextra 4523214 4523383 -24481273 + DOC LINE Jockey 4553 4721 -4 7 619 3063 202 27 4 chrUextra 4523399 4524114 -24480542 + SAR_DM Satellite Satellite 326 1056 -416 7 619 4053 181 12 11 chrUextra 4524253 4525137 -24479519 - SAR_DM Satellite Satellite -396 1076 192 7 619 7199 47 31 3 chrUextra 4527270 4528184 -24476472 - R1_DM LINE R1 -4193 1163 225 7 619 1524 35 0 0 chrUextra 4528284 4528455 -24476201 + R1_DM LINE R1 5186 5356 0 7 619 4503 62 3 3 chrUextra 4528489 4529057 -24475599 + R1_DM LINE R1 24 591 -4765 7 619 1161 27 34 0 chrUextra 4529047 4529196 -24475460 + R1_DM LINE R1 796 949 -4407 7 619 298 277 99 73 chrUextra 4529446 4529637 -24475019 + Invader1_LTR LTR Gypsy 84 279 -144 7 619 376 49 65 16 chrUextra 4529682 4529744 -24474912 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 619 1016 168 102 15 chrUextra 4529743 4529948 -24474708 - DMLTR5 LTR Gypsy 0 266 44 7 619 512 120 98 0 chrUextra 4531407 4531499 -24473157 + NTS_DM Other Other 4 104 -136 7 619 26 93 0 0 chrUextra 4531904 4531979 -24472677 + AT_rich Low_complexity Low_complexity 1 75 0 7 619 32 0 0 0 chrUextra 4532073 4532105 -24472551 + AT_rich Low_complexity Low_complexity 1 32 0 7 619 2671 95 39 9 chrUextra 4532340 4533250 -24471406 + DMSAT6 Satellite Satellite 1 937 -119 7 619 7941 25 0 3 chrUextra 4533356 4534268 -24470388 + G5_DM LINE Jockey 2604 3512 -1344 7 619 4528 75 0 3 chrUextra 4534368 4534959 -24469697 + STALKER4_I LTR Gypsy 5395 5983 -547 7 619 2975 6 0 0 chrUextra 4534960 4535282 -24469374 + STALKER4_I LTR Gypsy 3870 4191 -2339 7 619 1234 139 111 9 chrUextra 4535382 4535607 -24469049 - MDG1_LTR LTR Gypsy -106 336 89 7 619 386 77 0 44 chrUextra 4535609 4535677 -24468979 + (TTA)n Simple_repeat Simple_repeat 2 66 0 7 619 3955 0 0 2 chrUextra 4535677 4536102 -24468554 + ROO_LTR LTR Pao 5 428 0 7 619 1557 17 0 0 chrUextra 4536103 4536283 -24468373 + (TTA)n Simple_repeat Simple_repeat 1 180 0 7 619 5176 17 0 0 chrUextra 4536396 4536990 -24467666 + FW_DM LINE Jockey 2650 3243 -1449 7 619 2245 75 2 24 chrUextra 4536990 4537310 -24467346 - STALKER4_LTR LTR Gypsy -10 392 94 7 619 457 256 131 24 chrUextra 4537410 4537578 -24467078 - TAHRE LINE telomeric -471 9992 9807 7 619 3283 182 45 22 chrUextra 4537590 4538282 -24466374 - Gypsy12_LTR LTR Gypsy -23 2313 1606 7 619 3439 16 0 0 chrUextra 4538424 4538807 -24465849 - PROTOP_A DNA P -722 383 1 7 619 810 48 29 0 chrUextra 4538807 4538895 -24465761 - DOC3_DM LINE Jockey -2611 2129 2039 7 619 3805 20 27 2 chrUextra 4538895 4539337 -24465319 + Gypsy12_LTR LTR Gypsy 1 453 -1883 7 619 7872 27 1 1 chrUextra 4539438 4540351 -24464305 - R1_DM LINE R1 -1251 4105 3193 7 619 8404 0 1 3 chrUextra 4540451 4541364 -24463292 + SSU-rRNA_Dme rRNA rRNA 545 1455 -540 7 619 4086 9 0 0 chrUextra 4541464 4541919 -24462737 + QUASIMODO_I LTR Gypsy 1864 2318 -3742 7 619 4214 0 0 11 chrUextra 4541919 4542377 -24462279 - HOBO DNA hAT 0 3016 2564 7 619 5363 96 50 26 chrUextra 4542477 4543374 -24461282 - PROTOP_A DNA P -186 919 1 7 619 7482 32 22 8 chrUextra 4544504 4545416 -24459240 + ROO_I LTR Pao 3688 4612 -3644 7 619 21 89 0 0 chrUextra 4546331 4546387 -24458269 + AT_rich Low_complexity Low_complexity 1 56 0 7 619 1588 105 22 38 chrUextra 4546529 4546796 -24457860 - Gypsy12_I LTR Gypsy -5257 289 27 7 619 1815 187 18 26 chrUextra 4546766 4547155 -24457501 - Gypsy12_LTR LTR Gypsy -1938 398 13 7 619 2112 70 4 11 chrUextra 4547168 4547442 -24457214 - Gypsy12_I LTR Gypsy 0 5546 5275 7 619 423 222 0 0 chrUextra 4547549 4547639 -24457017 - IDEFIX_I LTR Gypsy -4487 1141 1052 7 619 3254 99 84 45 chrUextra 4547806 4548378 -24456278 - IDEFIX_LTR LTR Gypsy 0 594 1 7 619 5124 0 15 0 chrUextra 4548555 4549149 -24455507 - ROO_I LTR Pao -7285 971 369 7 619 2454 11 0 0 chrUextra 4549149 4549415 -24455241 - DMLTR5 LTR Gypsy 0 266 1 7 619 434 38 0 0 chrUextra 4549415 4549468 -24455188 - HMSBEAGLE_I LTR Gypsy 0 6529 6477 7 619 4137 8 0 63 chrUextra 4549569 4550077 -24454579 + MICROPIA_LTR LTR Gypsy 1 476 0 7 619 3507 20 5 0 chrUextra 4550077 4550481 -24454175 - ACCORD2_I LTR Gypsy -6128 1084 679 7 619 442 248 122 14 chrUextra 4550596 4550743 -24453913 - HETA LINE telomeric -478 5603 5441 7 619 1167 144 45 5 chrUextra 4550733 4550935 -24453721 - Gypsy12A_LTR LTR Gypsy -18 2262 2053 7 619 4274 93 2 0 chrUextra 4550933 4551494 -24453162 - Gypsy12_I LTR Gypsy -924 4622 4061 7 619 6459 96 20 11 chrUextra 4551594 4552507 -24452149 + Gypsy12_I LTR Gypsy 1800 2720 -2826 7 619 3584 185 22 41 chrUextra 4552609 4553520 -24451136 + SAR_DM Satellite Satellite 90 983 -489 7 619 4080 30 104 6 chrUextra 4553620 4554533 -24450123 + DMRT1B LINE R1 3608 4610 -573 7 619 6789 58 6 7 chrUextra 4554633 4555508 -24449148 - TRANSIB2 DNA Transib -1961 883 10 7 619 2848 0 0 12 chrUextra 4555646 4555970 -24448686 + ACCORD_LTR LTR Gypsy 239 558 0 7 619 5073 31 0 0 chrUextra 4555970 4556559 -24448097 + R1_DM LINE R1 3126 3714 -1642 7 619 524 125 191 9 chrUextra 4556661 4556762 -24447894 + HOBO DNA hAT 193 312 -2704 7 619 1927 101 203 22 chrUextra 4556762 4557166 -24447490 + PROTOP DNA P 1 477 -4003 7 619 3004 75 0 5 chrUextra 4557143 4557572 -24447084 + HOBO DNA hAT 330 756 -2260 7 619 2297 105 31 34 chrUextra 4559698 4560611 -24444045 - DMSAT6 Satellite Satellite -73 909 1 7 619 4469 41 17 7 chrUextra 4560711 4561295 -24443361 - CIRCE LINE Composite -2846 3510 2921 7 619 2351 25 3 28 chrUextra 4561294 4561616 -24443040 + ROO_I LTR Pao 182 495 -7761 7 619 920 76 9 21 chrUextra 4561735 4562158 -24442498 + RSP Satellite Satellite 1 418 0 7 619 1328 298 0 6 chrUextra 4562163 4562632 -24442024 + G2_DM LINE Jockey 1231 1696 -1406 7 619 506 223 8 15 chrUextra 4562761 4562893 -24441763 - DMLTR5 LTR Gypsy 0 266 136 7 619 227 88 0 0 chrUextra 4562889 4562923 -24441733 - HMSBEAGLE_I LTR Gypsy -92 6437 6404 7 619 272 130 0 0 chrUextra 4563022 4563068 -24441588 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 7 619 2133 142 21 0 chrUextra 4563276 4563649 -24441007 - HMSBEAGLE_I LTR Gypsy -4075 2454 2074 7 619 464 186 0 17 chrUextra 4563749 4563864 -24440792 + XDMR_DM Unknown Unknown 248 360 0 7 619 3566 183 12 20 chrUextra 4563778 4564658 -24439998 - SAR_DM Satellite Satellite -354 1118 246 7 619 598 14 0 0 chrUextra 4564761 4564832 -24439824 + DM176_LTR LTR Gypsy 213 283 -224 7 619 2020 20 16 0 chrUextra 4564833 4565086 -24439570 + DM176_LTR LTR Gypsy 251 507 0 7 619 1135 98 96 19 chrUextra 4565087 4565377 -24439279 - ZAM_I LTR Gypsy -6989 501 1 7 619 1260 167 14 68 chrUextra 4565377 4565673 -24438983 - ZAM_LTR LTR Gypsy 0 472 193 7 619 744 0 0 0 chrUextra 4565773 4565875 -24438781 + Copia_LTR LTR Copia 175 276 0 7 619 232 0 0 0 chrUextra 4565875 4565909 -24438747 + Copia_LTR LTR Copia 243 276 0 7 619 23 0 0 0 chrUextra 4566289 4566312 -24438344 + AT_rich Low_complexity Low_complexity 1 23 0 7 619 4165 6 0 2 chrUextra 4566785 4567273 -24437383 - DOC LINE Jockey -268 4457 3971 7 619 3631 5 0 5 chrUextra 4567265 4567697 -24436959 - DOC LINE Jockey -934 3791 3362 7 619 3563 184 18 23 chrUextra 4567801 4568709 -24435947 - SAR_DM Satellite Satellite -224 1248 346 7 619 2530 214 61 45 chrUextra 4568819 4569720 -24434936 + TAHRE LINE telomeric 7035 7949 -2514 7 619 2257 268 26 35 chrUextra 4569821 4570641 -24434015 + MAX_I LTR Pao 6435 7246 -668 7 619 4484 21 7 10 chrUextra 4570076 4570653 -24434003 - BATUMI_I LTR Pao -962 7001 6427 7 619 404 35 0 0 chrUextra 4570676 4570733 -24433923 + BATUMI_I LTR Pao 7303 7359 -604 7 619 3047 207 46 13 chrUextra 4570838 4571745 -24432911 + SAR_DM Satellite Satellite 272 1208 -264 7 619 442 277 43 98 chrUextra 4571858 4572186 -24432470 - Gypsy12_LTR LTR Gypsy -1348 988 679 7 619 1685 192 9 50 chrUextra 4572336 4572757 -24431899 - Gypsy12_LTR LTR Gypsy -1899 437 34 7 619 2719 3 0 3 chrUextra 4572857 4573173 -24431483 + LSU-rRNA_Dme rRNA rRNA 2341 2655 -1245 7 619 4752 5 0 0 chrUextra 4573173 4573725 -24430931 + R1_DM LINE R1 4805 5356 0 7 619 388 22 0 0 chrUextra 4573723 4573769 -24430887 + LSU-rRNA_Dme rRNA rRNA 2640 2685 -1215 7 619 2536 7 7 0 chrUextra 4573869 4574169 -24430487 - DMRT1B LINE R1 -4881 302 1 7 619 3258 5 0 0 chrUextra 4574397 4574781 -24429875 - DMRT1B LINE R1 -114 5069 4686 7 619 7456 11 34 3 chrUextra 4574881 4575793 -24428863 + G2_DM LINE Jockey 1206 2145 -957 7 619 2951 179 10 10 chrUextra 4575900 4576600 -24428056 + SAR_DM Satellite Satellite 192 891 -581 7 619 1535 50 0 0 chrUextra 4576606 4576805 -24427851 - Gypsy6A_LTR LTR Gypsy 0 420 222 7 619 7041 46 50 0 chrUextra 4576905 4577817 -24426839 - BS2 LINE Jockey -733 3988 3031 7 619 3289 204 13 21 chrUextra 4577917 4578826 -24425830 + SAR_DM Satellite Satellite 303 1204 -268 7 619 516 203 233 0 chrUextra 4578988 4579121 -24425535 - TIRANT_I LTR Gypsy -3752 3940 3777 7 619 21 82 0 0 chrUextra 4579273 4579322 -24425334 + AT_rich Low_complexity Low_complexity 1 49 0 7 619 1404 75 71 4 chrUextra 4579532 4579772 -24424884 - DMCR1A LINE CR1 -91 4379 4124 7 619 493 76 25 12 chrUextra 4579761 4579841 -24424815 - DMCR1A LINE CR1 -761 3709 3629 7 619 41 47 0 34 chrUextra 4579960 4580048 -24424608 + AT_rich Low_complexity Low_complexity 1 85 0 7 619 690 50 60 0 chrUextra 4580146 4580246 -24424410 + DNAREP1_DM LINE Penelope 1 106 -488 7 619 30 45 0 0 chrUextra 4580395 4580439 -24424217 + AT_rich Low_complexity Low_complexity 1 44 0 7 619 7614 10 8 2 chrUextra 4580953 4581865 -24422791 - DOC2_DM LINE Jockey -575 4218 3302 7 619 3768 181 13 20 chrUextra 4581965 4582875 -24421781 + SAR_DM Satellite Satellite 256 1159 -313 7 619 2589 3 0 0 chrUextra 4582977 4583278 -24421378 - DOC LINE Jockey -4414 311 11 7 619 2219 3 3 56 chrUextra 4583989 4584291 -24420365 - ACCORD2_I LTR Gypsy -6926 286 1 7 619 1796 9 0 18 chrUextra 4584291 4584510 -24420146 - ACCORD2_LTR LTR Gypsy 0 215 1 7 619 3177 13 5 0 chrUextra 4584510 4584901 -24419755 + FW_DM LINE Jockey 1495 1887 -2805 7 619 4606 14 2 3 chrUextra 4585342 4585913 -24418743 - PROTOP_A DNA P 0 1105 536 7 619 853 90 0 0 chrUextra 4586013 4586147 -24418509 - ARS406_DM Unknown Unknown -219 134 1 7 619 3824 171 10 11 chrUextra 4586045 4586923 -24417733 + SAR_DM Satellite Satellite 185 1061 -411 7 77 3234 177 34 29 chrUextra 4587025 4587898 -24416758 + SAR_DM Satellite Satellite 287 1164 -308 7 620 3338 178 14 20 chrUextra 4588039 4588948 -24415708 - SAR_DM Satellite Satellite -514 903 1 7 620 3377 191 17 20 chrUextra 4589048 4589937 -24414719 + SAR_DM Satellite Satellite 379 1264 -208 7 620 850 60 0 0 chrUextra 4589840 4589957 -24414699 - ARS406_DM Unknown Unknown -164 189 73 7 620 4893 160 10 9 chrUextra 4590065 4590967 -24413689 - Gypsy5_I LTR Gypsy -2869 3640 2738 7 620 556 212 141 14 chrUextra 4591308 4591528 -24413128 - DM412 LTR Gypsy -2433 4464 4217 7 620 334 202 35 12 chrUextra 4591552 4591637 -24413019 - STALKER4_I LTR Gypsy -2777 3753 3667 7 620 7479 21 13 1 chrUextra 4592081 4592992 -24411664 - R1_DM LINE R1 -11 5345 4424 7 620 676 263 5 5 chrUextra 4593100 4593314 -24411342 + Invader1_I LTR Gypsy 2356 2569 -617 7 620 7374 24 0 1 chrUextra 4594103 4595014 -24409642 + TRANSIB2 DNA Transib 513 1422 -1422 7 620 2328 29 0 7 chrUextra 4595121 4595431 -24409225 - NINJA_I LTR Pao -5703 308 1 7 620 1155 47 0 7 chrUextra 4595431 4595580 -24409076 - NINJA_LTR LTR Pao 0 317 170 7 620 3433 19 7 0 chrUextra 4595575 4595994 -24408662 + PROTOP_A DNA P 684 1105 0 7 620 7721 1 0 0 chrUextra 4596125 4597036 -24407620 + ACCORD_I LTR Gypsy 1900 2810 -3478 7 620 7423 27 16 0 chrUextra 4597136 4598047 -24406609 - R1_DM LINE R1 -2781 2575 1650 7 620 5052 11 5 3 chrUextra 4598147 4598757 -24405899 - QUASIMODO_LTR LTR Gypsy -47 611 1 7 620 4862 67 10 12 chrUextra 4599158 4599843 -24404813 - R1_DM LINE R1 -4672 684 1 7 620 914 44 0 0 chrUextra 4599876 4599990 -24404666 - R1_DM LINE R1 0 5356 5243 7 620 680 0 0 0 chrUextra 4599987 4600069 -24404587 - R1_DM LINE R1 -290 5066 4985 7 620 5540 12 25 0 chrUextra 4600169 4600841 -24403815 - Gypsy4_I LTR Gypsy -1650 4638 3950 7 620 1805 9 32 0 chrUextra 4600854 4601074 -24403582 - Gypsy4_I LTR Gypsy -2392 3896 3670 7 620 3546 184 18 23 chrUextra 4601184 4602089 -24402567 - SAR_DM Satellite Satellite -227 1245 346 7 620 5355 74 48 34 chrUextra 4602202 4603102 -24401554 - TART LINE telomeric -11115 3362 2451 7 620 4529 97 19 27 chrUextra 4603203 4604113 -24400543 + TART LINE telomeric 6981 7678 -6799 7 620 2018 8 0 0 chrUextra 4604213 4604448 -24400208 - TAHRE LINE telomeric -7867 2596 2362 7 620 5187 32 35 16 chrUextra 4604448 4605124 -24399532 - TAHRE LINE telomeric -8422 2041 1353 7 620 5408 3 0 0 chrUextra 4605224 4605856 -24398800 - DOC LINE Jockey -2747 1978 1347 7 620 23 0 0 0 chrUextra 4605861 4605884 -24398772 + AT_rich Low_complexity Low_complexity 1 23 0 7 620 474 175 78 23 chrUextra 4605959 4606088 -24398568 - Invader2_LTR LTR Gypsy 0 266 131 7 620 284 83 42 0 chrUextra 4606085 4606133 -24398523 + BARI1 DNA Tc1 39 88 -1662 7 620 7822 1 0 0 chrUextra 4606235 4607146 -24397510 + G_DM LINE Jockey 590 1500 -2846 7 620 1655 140 121 0 chrUextra 4607246 4607568 -24397088 - R1_DM LINE R1 -458 4898 4538 7 620 241 269 87 29 chrUextra 4607575 4607713 -24396943 - Gypsy8_LTR LTR Gypsy -158 146 1 7 620 865 104 139 6 chrUextra 4607784 4607949 -24396707 + DNAREP1_DM LINE Penelope 1 187 -407 7 620 631 189 48 16 chrUextra 4607969 4608157 -24396499 + DNAREP1_DM LINE Penelope 123 316 -278 7 620 2656 14 3 6 chrUextra 4608257 4608605 -24396051 + DOC LINE Jockey 4379 4725 0 7 620 302 202 65 33 chrUextra 4608699 4608791 -24395865 + Gypsy5_I LTR Gypsy 6411 6505 -4 7 620 267 206 10 49 chrUextra 4609015 4609117 -24395539 + HETA LINE telomeric 5771 5868 -213 7 620 2961 165 8 3 chrUextra 4609269 4610174 -24394482 - SAR_DM Satellite Satellite -645 908 1 7 620 1620 14 0 0 chrUextra 4610592 4610952 -24393704 + (CAAGA)n Simple_repeat Simple_repeat 1 360 0 7 620 3312 198 40 18 chrUextra 4611290 4612201 -24392455 - SAR_DM Satellite Satellite -264 1208 278 7 620 3722 184 17 20 chrUextra 4612301 4613212 -24391444 + SAR_DM Satellite Satellite 1 907 -208 7 620 1293 149 82 33 chrUextra 4613312 4613617 -24391039 - Gypsy6_LTR LTR Gypsy -87 320 1 7 620 1120 6 25 19 chrUextra 4613617 4613778 -24390878 + NTS_DM Other Other 79 240 0 7 620 1847 4 17 13 chrUextra 4613778 4614017 -24390639 + NTS_DM Other Other 1 240 0 7 620 1271 6 0 24 chrUextra 4614017 4614183 -24390473 + NTS_DM Other Other 1 162 -78 7 620 2003 51 70 0 chrUextra 4615334 4615607 -24389049 + G5_DM LINE Jockey 4076 4367 -489 7 620 1812 45 4 0 chrUextra 4615604 4615846 -24388810 + G5_DM LINE Jockey 4602 4844 -12 7 620 247 178 439 8 chrUextra 4615881 4616011 -24388645 + PROTOP DNA P 1 186 -4294 7 620 1809 101 7 20 chrUextra 4616344 4616638 -24388018 - TART LINE telomeric -8865 5612 5323 7 620 1283 160 118 20 chrUextra 4616618 4616924 -24387732 - TART LINE telomeric -10594 3883 3548 7 620 1247 6 90 0 chrUextra 4616922 4617078 -24387578 - PROTOP_B DNA P -983 170 1 7 620 1441 128 57 3 chrUextra 4617507 4617789 -24386867 + DNAREP1_DM LINE Penelope 1 297 -297 7 620 5384 3 0 0 chrUextra 4618364 4618988 -24385668 + R1_DM LINE R1 4725 5348 -8 7 620 2300 4 0 0 chrUextra 4619010 4619274 -24385382 + LSU-rRNA_Dme rRNA rRNA 2640 2903 -997 7 620 2829 132 91 4 chrUextra 4619374 4619892 -24384764 + HMSBEAGLE_I LTR Gypsy 5257 5819 -710 7 620 3152 3 3 0 chrUextra 4620384 4620756 -24383900 - POGO DNA Pogo -235 1886 1514 7 620 4702 2 0 2 chrUextra 4620747 4621294 -24383362 - POGO DNA Pogo -1574 547 2 7 620 3265 194 47 20 chrUextra 4621394 4622304 -24382352 - SAR_DM Satellite Satellite -242 1230 296 7 620 2382 109 33 8 chrUextra 4622404 4623314 -24381342 + DMSAT6 Satellite Satellite 1 933 -29 7 620 520 317 41 32 chrUextra 4623419 4623758 -24380898 - MICROPIA_I LTR Gypsy -4134 342 1 7 620 231 320 20 85 chrUextra 4623785 4624031 -24380625 - ACCORD2_I LTR Gypsy -6457 755 526 7 620 2820 66 5 18 chrUextra 4624930 4625330 -24379326 + Baggins1 LINE LOA 4791 5185 -268 7 620 3345 194 23 12 chrUextra 4625440 4626323 -24378333 - SAR_DM Satellite Satellite -396 1076 185 7 620 470 183 16 16 chrUextra 4626221 4626343 -24378313 + ARS406_DM Unknown Unknown 2 123 -230 7 620 3333 11 25 14 chrUextra 4626444 4626885 -24377771 - QUASIMODO_I LTR Gypsy -4170 1890 1445 7 620 3544 15 86 0 chrUextra 4626890 4627354 -24377302 - QUASIMODO_I LTR Gypsy -2829 3231 2728 7 620 230 0 0 0 chrUextra 4627454 4627481 -24377175 + ROO_I LTR Pao 8230 8256 0 7 620 3742 2 0 0 chrUextra 4627481 4627909 -24376747 + ROO_LTR LTR Pao 1 428 0 7 620 371 116 87 0 chrUextra 4627909 4627972 -24376684 - ROVER-LTR_DM LTR Gypsy -298 69 1 7 620 589 116 0 0 chrUextra 4627975 4628070 -24376586 + STALKER4_LTR LTR Gypsy 271 365 -37 7 620 5317 9 0 0 chrUextra 4628464 4629096 -24375560 + FW_DM LINE Jockey 4059 4690 -2 7 620 1399 34 0 0 chrUextra 4629196 4629374 -24375282 - DOC3_DM LINE Jockey 0 4740 4563 7 620 4538 16 0 7 chrUextra 4629474 4630027 -24374629 + MICROPIA_I LTR Gypsy 3587 4135 -341 7 620 666 12 0 0 chrUextra 4630024 4630104 -24374552 + MICROPIA_LTR LTR Gypsy 32 111 -365 7 620 814 248 8 24 chrUextra 4630108 4630356 -24374300 - DMLTR5 LTR Gypsy -22 244 1 7 620 238 0 0 0 chrUextra 4630357 4630384 -24374272 + DMCR1A LINE CR1 1624 1650 -2820 7 620 6593 47 71 1 chrUextra 4630484 4631394 -24373262 - DMCR1A LINE CR1 -2896 1574 601 7 620 3477 190 17 21 chrUextra 4631503 4632403 -24372253 + SAR_DM Satellite Satellite 369 1264 -208 7 620 1682 100 28 0 chrUextra 4632504 4632753 -24371903 - Gypsy_I LTR Gypsy -789 5718 5463 7 620 231 139 0 0 chrUextra 4632754 4632797 -24371859 + G6_DM LINE Jockey 1 43 -1999 7 620 1107 101 10 46 chrUextra 4633514 4633711 -24370945 + DM297_I LTR Gypsy 2578 2767 -3400 7 620 1336 74 28 9 chrUextra 4633740 4633957 -24370699 + DM297_I LTR Gypsy 2707 2927 -3240 7 620 475 145 0 0 chrUextra 4633961 4634037 -24370619 - BS3_DM LINE Jockey -404 1386 1311 7 620 2944 63 2 0 chrUextra 4634027 4634423 -24370233 - BS3_DM LINE Jockey -746 1044 648 7 620 4177 68 70 12 chrUextra 4635532 4636439 -24368217 + TART LINE telomeric 7057 7678 -6799 7 620 943 186 102 0 chrUextra 4636988 4637214 -24367442 + FW_DM LINE Jockey 1437 1685 -3007 7 620 584 53 0 0 chrUextra 4637229 4637304 -24367352 + FW_DM LINE Jockey 1898 1972 -2720 7 620 783 151 41 7 chrUextra 4637302 4637449 -24367207 + FW_DM LINE Jockey 2403 2554 -2138 7 620 2552 84 21 30 chrUextra 4637551 4638459 -24366197 + DMSAT6 Satellite Satellite 1 900 -74 7 620 4591 122 48 52 chrUextra 4638559 4639467 -24365189 - TART LINE telomeric -8115 6362 5458 7 620 2295 18 4 0 chrUextra 4639568 4639842 -24364814 + Gypsy4_LTR LTR Gypsy 13 287 0 7 620 5149 8 2 0 chrUextra 4639842 4640477 -24364179 + Gypsy4_I LTR Gypsy 1 636 -5652 7 620 1554 0 11 0 chrUextra 4640577 4640767 -24363889 - NTS_DM Other Other -48 192 1 7 620 1850 4 17 13 chrUextra 4640767 4641006 -24363650 - NTS_DM Other Other 0 240 1 7 620 2219 4 4 4 chrUextra 4641026 4641302 -24363354 + Copia_LTR LTR Copia 1 276 0 7 620 1446 6 0 22 chrUextra 4641302 4641486 -24363170 + Copia_I LTR Copia 1 180 -4413 7 620 3431 89 20 8 chrUextra 4641588 4642096 -24362560 - Gypsy12_I LTR Gypsy -3906 1640 1127 7 620 2472 84 2 45 chrUextra 4642094 4642495 -24362161 - Gypsy12_I LTR Gypsy -5091 455 72 7 620 7579 6 33 0 chrUextra 4642595 4643504 -24361152 - DM1731_I LTR Copia -1258 2718 1780 7 620 3984 2 0 0 chrUextra 4643604 4644074 -24360582 - QUASIMODO_LTR LTR Gypsy -188 470 1 7 620 3398 5 0 5 chrUextra 4644074 4644513 -24360143 - STALKER4_I LTR Gypsy -55 6475 6039 7 620 2261 92 34 33 chrUextra 4644615 4645522 -24359134 - DMSAT6 Satellite Satellite -66 908 1 7 620 3161 57 60 7 chrUextra 4646068 4646531 -24358125 + PROTOP DNA P 1 488 -3992 7 620 5602 98 46 0 chrUextra 4646631 4647540 -24357116 - TART_B1 LINE telomeric -7660 2994 2044 7 620 1726 170 8 5 chrUextra 4647640 4648013 -24356643 - SAR_DM Satellite Satellite -700 772 399 7 620 4420 13 24 0 chrUextra 4648015 4648549 -24356107 + IVK_DM LINE I 1 547 -4855 7 620 2888 208 25 12 chrUextra 4648682 4649556 -24355100 + SAR_DM Satellite Satellite 1 885 -354 7 620 2010 32 3 102 chrUextra 4649658 4649973 -24354683 + Gypsy12_LTR LTR Gypsy 653 936 -1400 7 620 551 176 81 51 chrUextra 4649980 4650177 -24354479 - DMCR1A LINE CR1 -41 4429 4227 7 620 7261 24 7 0 chrUextra 4650667 4651557 -24353099 + R1_DM LINE R1 4461 5356 0 7 620 7579 7 13 0 chrUextra 4651676 4652585 -24352071 + STALKER4_I LTR Gypsy 1444 2364 -4166 7 620 3597 188 9 14 chrUextra 4652692 4653578 -24351078 - SAR_DM Satellite Satellite -396 1076 195 7 620 552 147 0 9 chrUextra 4653484 4653594 -24351062 + ARS406_DM Unknown Unknown 1 109 -244 7 620 1794 175 15 5 chrUextra 4653694 4654090 -24350566 + SAR_DM Satellite Satellite 500 899 -573 7 620 7686 19 0 0 chrUextra 4654703 4655612 -24349044 - BEL_I LTR Pao -1146 4258 3350 7 620 330 328 28 38 chrUextra 4656052 4656379 -24348277 - Gypsy3_I LTR Gypsy -5255 1757 1218 7 620 1968 25 0 0 chrUextra 4656721 4656958 -24347698 + Baggins1 LINE LOA 3533 3769 -1684 7 620 3332 39 0 0 chrUextra 4656956 4657369 -24347287 + Baggins1 LINE LOA 4054 4466 -987 7 620 2062 42 0 0 chrUextra 4657371 4657630 -24347026 + Baggins1 LINE LOA 4364 4622 -831 7 620 3445 184 34 18 chrUextra 4657742 4658633 -24346023 + SAR_DM Satellite Satellite 326 1230 -242 7 620 2414 94 23 34 chrUextra 4658740 4659621 -24345035 - DMSAT6 Satellite Satellite -13 871 1 7 620 2077 43 63 11 chrUextra 4660047 4660331 -24344325 + PROTOP DNA P 1 299 -4181 7 620 1177 47 86 0 chrUextra 4660318 4660657 -24343999 + PROTOP_A DNA P 522 757 -3723 7 620 1300 0 0 7 chrUextra 4660757 4660909 -24343747 + LSU-rRNA_Dme rRNA rRNA 2482 2632 -1268 7 620 1470 0 6 0 chrUextra 4660909 4661082 -24343574 + R1_DM LINE R1 1 174 -5182 7 620 4868 2 0 3 chrUextra 4661097 4661666 -24342990 + R2_DM LINE R2 653 1219 -2388 7 620 3207 179 49 54 chrUextra 4661802 4662674 -24341982 + Gypsy12_LTR LTR Gypsy 1456 2323 -13 7 620 3503 192 7 21 chrUextra 4662774 4663682 -24340974 + SAR_DM Satellite Satellite 1 895 -354 7 620 460 71 0 0 chrUextra 4663782 4663852 -24340804 + S_DM DNA Tc1 1667 1736 0 7 620 1034 15 0 8 chrUextra 4663852 4663979 -24340677 - CIRCE LINE Composite -1861 4495 4370 7 620 1847 92 45 64 chrUextra 4663979 4664353 -24340303 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 620 1487 139 65 15 chrUextra 4664353 4664690 -24339966 - ROVER-I_DM LTR Gypsy 0 6584 6231 7 620 946 82 10 21 chrUextra 4664848 4665698 -24338958 - RSP Satellite Satellite 0 841 1 7 620 3062 0 0 0 chrUextra 4665798 4666155 -24338501 - NOMAD_LTR LTR Gypsy -161 357 1 7 620 551 4 127 11 chrUextra 4666155 4666706 -24337950 + (TA)n Simple_repeat Simple_repeat 1 615 0 7 620 2429 3 0 0 chrUextra 4666806 4667089 -24337567 + Copia_I LTR Copia 4311 4593 0 7 620 2260 7 0 0 chrUextra 4667089 4667365 -24337291 + Copia_LTR LTR Copia 1 276 0 7 620 2985 9 0 0 chrUextra 4667365 4667714 -24336942 - STALKER4_I LTR Gypsy -1991 4539 4191 7 620 361 119 15 0 chrUextra 4667814 4667881 -24336775 - ARS406_DM Unknown Unknown -285 68 1 7 620 3701 180 7 18 chrUextra 4667842 4668717 -24335939 + SAR_DM Satellite Satellite 247 1111 -361 7 620 3267 216 76 14 chrUextra 4668822 4669730 -24334926 + ROVER-I_DM LTR Gypsy 1866 2829 -3755 7 620 3621 191 12 19 chrUextra 4669830 4670730 -24333926 + SAR_DM Satellite Satellite 1 893 -255 7 620 972 9 0 0 chrUextra 4670838 4670950 -24333706 - LSU-rRNA_Dme rRNA rRNA -1149 2751 2640 7 620 3798 0 0 0 chrUextra 4670948 4671384 -24333272 - R1_DM LINE R1 0 5356 4921 7 620 3102 6 0 0 chrUextra 4671387 4671746 -24332910 - R1_DM LINE R1 0 5356 4998 7 620 2849 142 55 11 chrUextra 4671847 4672388 -24332268 - TART LINE telomeric -10618 3859 3295 7 620 1620 66 209 28 chrUextra 4672400 4672754 -24331902 - TART LINE telomeric -11327 3150 2733 7 620 5817 81 82 2 chrUextra 4672854 4673762 -24330894 + TART LINE telomeric 135 1114 -13363 7 620 6104 62 6 1 chrUextra 4673862 4674768 -24329888 - TART LINE telomeric -12007 2470 1666 7 620 244 128 0 21 chrUextra 4675113 4675161 -24329495 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 620 244 128 0 21 chrUextra 4675322 4675370 -24329286 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 620 244 128 0 21 chrUextra 4675600 4675648 -24329008 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 620 351 49 65 16 chrUextra 4675670 4675732 -24328924 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 620 2420 144 18 75 chrUextra 4675880 4676711 -24327945 - HETA LINE telomeric -5404 677 1 7 620 510 44 0 0 chrUextra 4676718 4676786 -24327870 - HETA LINE telomeric 0 6081 6014 7 620 2179 134 24 19 chrUextra 4676886 4677790 -24326866 - DMSAT6 Satellite Satellite -7 909 1 7 620 3735 186 17 23 chrUextra 4677894 4678802 -24325854 - SAR_DM Satellite Satellite -416 902 1 7 620 986 191 69 9 chrUextra 4678903 4679135 -24325521 - HETA LINE telomeric -1805 4276 4031 7 620 22 56 0 0 chrUextra 4679285 4679321 -24325335 + AT_rich Low_complexity Low_complexity 1 36 0 7 620 295 187 50 101 chrUextra 4679366 4679485 -24325171 + Copia_I LTR Copia 4401 4513 -80 7 620 7131 25 51 1 chrUextra 4679910 4680818 -24323838 + R1_DM LINE R1 3435 4387 -969 7 620 3601 182 14 17 chrUextra 4680919 4681826 -24322830 + SAR_DM Satellite Satellite 1 904 -396 7 620 1773 23 0 0 chrUextra 4681927 4682141 -24322515 + DIVER_I LTR Pao 5430 5643 0 7 620 1204 103 0 100 chrUextra 4682141 4682390 -24322266 + DIVER_LTR LTR Pao 1 224 0 7 620 3404 14 24 0 chrUextra 4682411 4682834 -24321822 - STALKER4_I LTR Gypsy -3882 2648 2216 7 620 21 89 0 0 chrUextra 4683694 4683750 -24320906 + AT_rich Low_complexity Low_complexity 1 56 0 7 620 23 68 0 0 chrUextra 4683788 4683832 -24320824 + AT_rich Low_complexity Low_complexity 1 44 0 7 620 4160 37 74 0 chrUextra 4683942 4684482 -24320174 - Baggins1 LINE LOA -1493 3960 3381 7 620 2777 55 0 0 chrUextra 4684488 4684850 -24319806 - Baggins1 LINE LOA -3237 2216 1855 7 620 2478 93 5 11 chrUextra 4684953 4685388 -24319268 - S_DM DNA Tc1 -1304 432 1 7 620 3832 11 0 15 chrUextra 4685388 4685858 -24318798 - CIRCE LINE Composite -1861 4495 4033 7 620 1384 0 0 0 chrUextra 4685958 4686119 -24318537 - ROO_LTR LTR Pao -267 161 1 7 620 1578 35 3 0 chrUextra 4686120 4686866 -24317790 + (CTTAT)n Simple_repeat Simple_repeat 1 748 0 7 620 3411 191 18 20 chrUextra 4686984 4687871 -24316785 + SAR_DM Satellite Satellite 326 1210 -262 7 620 881 50 8 0 chrUextra 4687974 4688094 -24316562 - Gypsy6A_LTR LTR Gypsy -299 121 1 7 620 365 143 0 0 chrUextra 4688094 4688151 -24316505 + DNAREP1_DM LINE Penelope 59 115 -479 7 620 257 229 0 0 chrUextra 4688981 4689042 -24315614 + Copia2_I LTR Copia 1860 1920 -2242 7 620 250 311 52 13 chrUextra 4689036 4689189 -24315467 + Copia_I LTR Copia 1958 2116 -2477 7 620 336 314 45 16 chrUextra 4689628 4689874 -24314782 + Copia2_I LTR Copia 2452 2704 -1458 7 620 6450 47 2 21 chrUextra 4689999 4690895 -24313761 - Gypsy7_I LTR Gypsy -4013 971 93 7 620 3289 196 48 10 chrUextra 4692003 4692909 -24311747 - SAR_DM Satellite Satellite -308 1164 225 7 620 5523 91 15 62 chrUextra 4693009 4693916 -24310740 - TART LINE telomeric -9120 5357 4493 7 620 1196 0 6 19 chrUextra 4694016 4694176 -24310480 + ROO_I LTR Pao 8099 8256 0 7 620 3741 2 0 0 chrUextra 4694176 4694604 -24310052 + ROO_LTR LTR Pao 1 428 0 7 620 24 0 0 0 chrUextra 4694768 4694792 -24309864 + AT_rich Low_complexity Low_complexity 1 24 0 7 620 3591 188 14 21 chrUextra 4695023 4695930 -24308726 + SAR_DM Satellite Satellite 1 900 -216 7 620 2443 286 1 5 chrUextra 4696048 4696932 -24307724 - G_DM LINE Jockey -1519 2827 1947 7 620 3769 44 4 0 chrUextra 4697061 4697540 -24307116 - FW2_DM LINE Jockey -674 3287 2807 7 620 1752 73 215 0 chrUextra 4697549 4697944 -24306712 - FW2_DM LINE Jockey -1416 2545 2066 7 620 2419 0 18 0 chrUextra 4698044 4698328 -24306328 + BEL_LTR LTR Pao 73 361 0 7 620 4186 44 67 16 chrUextra 4698328 4698951 -24305705 - QUASIMODO_I LTR Gypsy -951 5109 4455 7 620 1429 128 22 25 chrUextra 4699053 4699373 -24305283 - DMSAT6 Satellite Satellite -147 323 5 7 620 2378 179 18 30 chrUextra 4699389 4700965 -24303691 - DMSAT6 Satellite Satellite 0 1557 1 7 620 1293 60 10 23 chrUextra 4701068 4701370 -24303286 + (AATAG)n Simple_repeat Simple_repeat 1 297 0 7 620 1289 56 6 0 chrUextra 4701402 4701581 -24303075 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 7 620 948 129 8 11 chrUextra 4701601 4701966 -24302690 + (AATAG)n Simple_repeat Simple_repeat 1 364 0 7 620 3334 190 20 20 chrUextra 4702072 4702930 -24301726 + SAR_DM Satellite Satellite 407 1264 -208 7 620 1027 49 7 0 chrUextra 4702833 4702975 -24301681 - ARS406_DM Unknown Unknown -164 189 47 7 620 4148 31 7 3 chrUextra 4703079 4703653 -24301003 + IDEFIX_I LTR Gypsy 4982 5557 -71 7 620 23 0 0 0 chrUextra 4703879 4703902 -24300754 + AT_rich Low_complexity Low_complexity 1 23 0 7 620 3937 29 0 0 chrUextra 4704086 4704577 -24300079 + MDG1_I LTR Gypsy 1971 2461 -4135 7 620 3263 34 0 0 chrUextra 4704578 4704993 -24299663 + MDG1_I LTR Gypsy 2982 3396 -3200 7 620 3373 226 12 30 chrUextra 4705093 4706000 -24298656 - ROVER-I_DM LTR Gypsy -4001 2583 1693 7 620 3688 178 16 19 chrUextra 4706102 4706978 -24297678 - SAR_DM Satellite Satellite -353 1119 247 7 620 360 134 0 15 chrUextra 4706939 4707007 -24297649 + ARS406_DM Unknown Unknown 1 67 -286 7 620 4285 96 19 0 chrUextra 4707107 4707742 -24296914 + HMSBEAGLE_I LTR Gypsy 2525 3171 -3358 7 620 1533 121 31 0 chrUextra 4707757 4708013 -24296643 + HMSBEAGLE_I LTR Gypsy 5306 5569 -960 7 620 449 147 90 107 chrUextra 4708192 4708314 -24296342 + G7_DM LINE Jockey 549 668 -524 7 620 3668 9 0 2 chrUextra 4708317 4708746 -24295910 + ROO_LTR LTR Pao 1 428 0 7 620 690 187 150 0 chrUextra 4708784 4708971 -24295685 + G7_DM LINE Jockey 664 878 -314 7 620 2401 94 28 22 chrUextra 4709121 4710028 -24294628 - DMSAT6 Satellite Satellite -45 912 1 7 620 1481 56 0 10 chrUextra 4710129 4710800 -24293856 + (CTTAT)n Simple_repeat Simple_repeat 1 664 0 7 620 1068 24 0 0 chrUextra 4710800 4710926 -24293730 + (ATCTG)n Simple_repeat Simple_repeat 3 129 0 7 620 708 74 0 0 chrUextra 4710927 4711035 -24293621 + (TATCG)n Simple_repeat Simple_repeat 3 110 0 7 620 463 269 0 0 chrUextra 4711135 4711265 -24293391 + MICROPIA_I LTR Gypsy 3747 3876 -600 7 620 6952 34 51 0 chrUextra 4712142 4713049 -24291607 - Baggins1 LINE LOA -4113 1340 388 7 620 1385 18 0 0 chrUextra 4713149 4713312 -24291344 + R1_DM LINE R1 5192 5354 -2 7 620 5124 62 6 3 chrUextra 4713347 4714048 -24290608 + R1_DM LINE R1 1 703 -4653 7 620 7553 1 0 0 chrUextra 4714155 4715061 -24289595 + ROVER-I_DM LTR Gypsy 1212 2117 -4467 7 620 2840 208 25 13 chrUextra 4715161 4716067 -24288589 + SAR_DM Satellite Satellite 1 917 -203 7 620 3160 5 0 49 chrUextra 4716167 4716573 -24288083 - DOC6_DM LINE Jockey -3836 386 1 7 620 330 120 0 0 chrUextra 4716599 4716649 -24288007 + Invader1_I LTR Gypsy 3137 3186 0 7 620 1490 129 17 38 chrUextra 4716649 4716940 -24287716 + Invader1_LTR LTR Gypsy 1 285 -138 7 620 2835 69 18 7 chrUextra 4717173 4717613 -24287043 + MDG1_I LTR Gypsy 691 1135 -5461 7 620 2726 53 13 2 chrUextra 4717685 4718079 -24286577 + MDG1_I LTR Gypsy 1131 1528 -5068 7 620 438 0 0 0 chrUextra 4718179 4718229 -24286427 - Invader1_LTR LTR Gypsy -373 50 1 7 620 218 212 15 0 chrUextra 4718300 4718366 -24286290 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 621 51 31 0 0 chrUextra 4718845 4718910 -24285746 + AT_rich Low_complexity Low_complexity 1 65 0 7 621 2557 84 23 24 chrUextra 4719185 4720091 -24284565 + DMSAT6 Satellite Satellite 1 905 -28 7 621 4478 3 59 2 chrUextra 4720191 4720764 -24283892 + LSU-rRNA_Dme rRNA rRNA 2027 2632 -1268 7 621 2836 3 6 0 chrUextra 4720764 4721097 -24283559 + R1_DM LINE R1 1 335 -5021 7 621 3029 191 15 21 chrUextra 4721207 4722101 -24282555 - SAR_DM Satellite Satellite -514 888 1 7 621 5509 36 34 4 chrUextra 4722203 4723109 -24281547 + BATUMI_I LTR Pao 4315 5422 -2541 7 621 3522 172 20 27 chrUextra 4723209 4724098 -24280558 - SAR_DM Satellite Satellite -264 1208 326 7 621 981 294 35 0 chrUextra 4724219 4724566 -24280090 - ROVER-I_DM LTR Gypsy -5107 1477 1119 7 621 682 24 0 0 chrUextra 4724573 4724655 -24280001 - TLD3 Unknown Unknown -89 83 2 7 621 1145 291 16 16 chrUextra 4724633 4725118 -24279538 + ROVER-I_DM LTR Gypsy 2576 3060 -3524 7 621 2289 55 37 19 chrUextra 4725223 4725597 -24279059 + ACCORD2_I LTR Gypsy 1635 2015 -5197 7 621 4362 26 0 0 chrUextra 4725595 4726127 -24278529 + ACCORD2_I LTR Gypsy 2128 2659 -4553 7 621 3415 188 34 17 chrUextra 4726230 4727133 -24277523 + SAR_DM Satellite Satellite 1 917 -313 7 621 2010 67 0 0 chrUextra 4727233 4727501 -24277155 + Gypsy12_I LTR Gypsy 3450 3717 -1829 7 621 4240 105 2 0 chrUextra 4727522 4728139 -24276517 + Gypsy12_I LTR Gypsy 3830 4447 -1099 7 621 1034 15 0 8 chrUextra 4728250 4728377 -24276279 - CIRCE LINE Composite -1861 4495 4370 7 621 1846 92 45 64 chrUextra 4728377 4728751 -24275905 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 621 1645 134 57 18 chrUextra 4728759 4729145 -24275511 - ROVER-I_DM LTR Gypsy -18 6566 6166 7 621 5440 3 0 0 chrUextra 4729245 4729886 -24274770 - DMRT1B LINE R1 -4275 908 268 7 621 1620 0 0 0 chrUextra 4729887 4730151 -24274505 + (TTGTG)n Simple_repeat Simple_repeat 1 264 0 7 621 2154 11 0 25 chrUextra 4730251 4730533 -24274123 + PROTOP DNA P 4206 4480 0 7 621 310 225 0 0 chrUextra 4730533 4730602 -24274054 + BS2 LINE Jockey 4146 4214 -507 7 621 791 110 58 6 chrUextra 4731257 4731431 -24273225 + HMSBEAGLE_I LTR Gypsy 528 710 -5819 7 621 4272 89 24 13 chrUextra 4731529 4732163 -24272493 + HMSBEAGLE_I LTR Gypsy 1122 1762 -4767 7 621 304 174 23 0 chrUextra 4732375 4732454 -24272202 - PROTOP_A DNA P -981 124 43 7 621 71 67 0 0 chrUextra 4732798 4732932 -24271724 + AT_rich Low_complexity Low_complexity 1 134 0 7 621 7805 4 2 1 chrUextra 4733269 4734175 -24270481 - LSU-rRNA_Dme rRNA rRNA -23 3877 2971 7 621 2537 181 92 20 chrUextra 4734275 4735179 -24269477 - TAHRE LINE telomeric -2183 8280 7373 7 621 3410 173 15 41 chrUextra 4735281 4736167 -24268489 + SAR_DM Satellite Satellite 256 1118 -354 7 621 366 168 19 29 chrUextra 4736082 4736186 -24268470 - XDMR_DM Unknown Unknown 0 360 258 7 621 7424 19 8 4 chrUextra 4736286 4737191 -24267465 + LSU-rRNA_Dme rRNA rRNA 2606 3513 -387 7 621 2530 3 0 0 chrUextra 4738296 4738590 -24266066 - DM1731_I LTR Copia -1326 2650 2357 7 621 5304 3 0 0 chrUextra 4738588 4739201 -24265455 - DM1731_I LTR Copia -1761 2215 1603 7 621 2668 219 25 52 chrUextra 4739313 4740106 -24264550 - Gypsy12_LTR LTR Gypsy -1564 772 1 7 621 325 262 0 0 chrUextra 4740106 4740203 -24264453 - DM297_I LTR Gypsy -2709 3458 3362 7 621 5635 90 16 2 chrUextra 4740310 4741211 -24263445 - MAX_I LTR Pao -1551 6412 5463 7 621 3111 208 26 21 chrUextra 4741316 4742209 -24262447 + SAR_DM Satellite Satellite 295 1191 -281 7 621 3554 194 9 10 chrUextra 4742332 4743218 -24261438 + SAR_DM Satellite Satellite 192 1076 -396 7 621 702 12 0 0 chrUextra 4743321 4743404 -24261252 - Copia2_I LTR Copia -4079 83 1 7 621 1665 5 0 0 chrUextra 4743404 4743601 -24261055 - Copia2_LTR_DM LTR Copia 0 198 2 7 621 1488 19 0 0 chrUextra 4743601 4743809 -24260847 + (TTA)n Simple_repeat Simple_repeat 1 208 0 7 621 1060 81 19 0 chrUextra 4743830 4743990 -24260666 + Jockey2 LINE Jockey 3089 3251 -177 7 621 199 26 77 26 chrUextra 4743996 4744035 -24260621 + (TTTTA)n Simple_repeat Simple_repeat 3 43 0 7 621 1122 29 0 0 chrUextra 4744057 4744195 -24260461 + (TTA)n Simple_repeat Simple_repeat 3 140 0 7 621 2474 117 24 28 chrUextra 4744326 4745231 -24259425 + DMSAT6 Satellite Satellite 1 901 -74 7 621 3395 3 0 0 chrUextra 4745331 4745719 -24258937 - GTWIN_LTR LTR Gypsy -107 388 1 7 621 293 196 50 101 chrUextra 4745728 4745847 -24258809 - Copia_I LTR Copia -80 4513 4401 7 621 22 56 0 0 chrUextra 4745892 4745928 -24258728 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 550 197 97 13 chrUextra 4746082 4746236 -24258420 + HETA LINE telomeric 4031 4197 -1884 7 621 870 9 0 27 chrUextra 4746338 4746450 -24258206 - NTS_DM Other Other -107 133 25 7 621 22 56 0 0 chrUextra 4746476 4746512 -24258144 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 255 125 0 0 chrUextra 4746525 4746565 -24258091 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 621 246 150 0 0 chrUextra 4746608 4746648 -24258008 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 621 246 150 0 0 chrUextra 4746701 4746741 -24257915 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 621 22 56 0 0 chrUextra 4746746 4746782 -24257874 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 3374 3 0 0 chrUextra 4746854 4747241 -24257415 - LSU-rRNA_Dme rRNA rRNA 0 3900 3514 7 621 2310 103 6 47 chrUextra 4747345 4748246 -24256410 + DMSAT6 Satellite Satellite 1 864 -69 7 621 3073 61 25 2 chrUextra 4748346 4748792 -24255864 - BATUMI_I LTR Pao -205 7758 7303 7 621 2308 50 9 12 chrUextra 4748815 4749141 -24255515 + BATUMI_I LTR Pao 6427 6751 -1212 7 621 886 52 0 8 chrUextra 4749134 4749251 -24255405 - BATUMI_I LTR Pao -4489 3474 3359 7 621 1353 77 0 0 chrUextra 4749352 4749546 -24255110 + HOBO DNA hAT 385 578 -2438 7 621 542 81 0 0 chrUextra 4749543 4749617 -24255039 - Baggins1 LINE LOA -589 4864 4791 7 621 2824 47 3 0 chrUextra 4749724 4750085 -24254571 - Baggins1 LINE LOA -202 5251 4890 7 621 4384 11 34 4 chrUextra 4750356 4750908 -24253748 - IDEFIX_LTR LTR Gypsy -25 569 1 7 621 553 83 127 40 chrUextra 4750912 4751038 -24253618 - MAX_I LTR Pao -7496 418 282 7 621 1281 12 0 0 chrUextra 4751361 4751527 -24253129 + STALKER4_I LTR Gypsy 6365 6530 0 7 621 3177 52 2 14 chrUextra 4751527 4751966 -24252690 + STALKER4_LTR LTR Gypsy 1 392 -10 7 621 1058 70 63 6 chrUextra 4752107 4752266 -24252390 - DMTOM1_LTR LTR Gypsy -150 260 93 7 621 5988 88 39 3 chrUextra 4752366 4753270 -24251386 - TART_B1 LINE telomeric -7362 3292 2357 7 621 1620 31 2 3 chrUextra 4753373 4754276 -24250380 + (CTTAT)n Simple_repeat Simple_repeat 1 902 0 7 621 2013 0 0 0 chrUextra 4754376 4754606 -24250050 + LSU-rRNA_Dme rRNA rRNA 3671 3900 0 7 621 27 29 0 0 chrUextra 4754678 4754712 -24249944 + AT_rich Low_complexity Low_complexity 1 34 0 7 621 22 56 0 0 chrUextra 4754776 4754812 -24249844 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 246 150 0 0 chrUextra 4754817 4754857 -24249799 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 621 246 150 0 0 chrUextra 4754909 4754949 -24249707 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 621 870 9 0 27 chrUextra 4755022 4755134 -24249522 + NTS_DM Other Other 25 133 -107 7 621 1070 21 0 14 chrUextra 4755134 4755281 -24249375 + NTS_DM Other Other 38 182 -58 7 621 2046 4 0 0 chrUextra 4755381 4755619 -24249037 - ROO_I LTR Pao -8018 238 1 7 621 3766 0 0 0 chrUextra 4755619 4756047 -24248609 - ROO_LTR LTR Pao 0 428 1 7 621 2060 8 0 0 chrUextra 4756047 4756286 -24248370 + CIRCE LINE Composite 1939 2177 -4179 7 621 3399 176 50 39 chrUextra 4756387 4757236 -24247420 - Gypsy12_LTR LTR Gypsy -23 2313 1456 7 621 1659 162 11 19 chrUextra 4757390 4757755 -24246901 - HETA LINE telomeric -2265 3816 3455 7 621 2561 119 39 35 chrUextra 4757753 4758294 -24246362 - TART LINE telomeric -4425 10052 9510 7 621 1909 4 0 0 chrUextra 4758394 4758619 -24246037 + MAX_I LTR Pao 7690 7914 0 7 621 2744 9 0 0 chrUextra 4758619 4758940 -24245716 + MAX_LTR LTR Pao 1 321 0 7 621 305 191 14 14 chrUextra 4758944 4759013 -24245643 + HETRP_DM Satellite Satellite 1601 1669 -203 7 621 625 187 14 14 chrUextra 4759146 4759287 -24245369 + HETRP_DM Satellite Satellite 1529 1669 -203 7 621 7241 26 0 0 chrUextra 4759398 4760265 -24244391 - R2_DM LINE R2 -809 2798 1932 7 621 3911 9 0 0 chrUextra 4760402 4760867 -24243789 - G6_DM LINE Jockey -1577 465 1 7 621 286 194 15 15 chrUextra 4760866 4760934 -24243722 + HETRP_DM Satellite Satellite 1602 1669 -203 7 621 210 37 0 0 chrUextra 4761065 4761092 -24243564 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 621 491 208 8 16 chrUextra 4761092 4761214 -24243442 + HETRP_DM Satellite Satellite 1549 1669 -203 7 621 3690 179 6 19 chrUextra 4761413 4762292 -24242364 - SAR_DM Satellite Satellite -411 1061 195 7 621 629 126 0 0 chrUextra 4762199 4762310 -24242346 + ARS406_DM Unknown Unknown 1 111 -242 7 621 553 77 0 0 chrUextra 4762410 4762488 -24242168 - HETA LINE telomeric -4110 1971 1894 7 621 3092 227 52 7 chrUextra 4762484 4763314 -24241342 - TAHRE LINE telomeric -9079 1384 518 7 621 7432 24 1 0 chrUextra 4763414 4764318 -24240338 + R1_DM LINE R1 1332 2236 -3120 7 621 1677 31 53 0 chrUextra 4764418 4764643 -24240013 - IDEFIX_I LTR Gypsy -5391 237 1 7 621 28 0 0 0 chrUextra 4764936 4764964 -24239692 + AT_rich Low_complexity Low_complexity 1 28 0 7 621 979 42 7 47 chrUextra 4765170 4765318 -24239338 - IDEFIX_LTR LTR Gypsy -56 538 397 7 621 2796 99 2 24 chrUextra 4765422 4765877 -24238779 - TART LINE telomeric -7228 7249 6805 7 621 1577 125 3 52 chrUextra 4765887 4766175 -24238481 - TART LINE telomeric -10520 3957 3684 7 621 522 133 33 163 chrUextra 4766171 4766324 -24238332 - TART LINE telomeric -11115 3362 3230 7 621 3683 171 14 22 chrUextra 4766431 4767311 -24237345 + SAR_DM Satellite Satellite 246 1118 -354 7 621 351 204 0 19 chrUextra 4767225 4767330 -24237326 - XDMR_DM Unknown Unknown 0 360 258 7 621 1677 10 0 0 chrUextra 4767430 4767629 -24237027 - ROO_I LTR Pao -8057 199 1 7 621 3699 5 0 2 chrUextra 4767629 4768058 -24236598 - ROO_LTR LTR Pao 0 428 1 7 621 2405 150 72 31 chrUextra 4768724 4769338 -24235318 - PROTOP_A DNA P 0 1105 467 7 621 6974 25 7 25 chrUextra 4769438 4770342 -24234314 - R1_DM LINE R1 -531 4825 3939 7 621 4111 4 0 0 chrUextra 4770442 4770927 -24233729 - QUASIMODO_LTR LTR Gypsy -173 485 1 7 621 3520 5 0 2 chrUextra 4770936 4771346 -24233310 - QUASIMODO_LTR LTR Gypsy 0 658 250 7 621 7601 11 8 0 chrUextra 4771449 4772350 -24232306 - Gypsy4_I LTR Gypsy -3560 2728 1821 7 621 485 48 0 0 chrUextra 4772450 4772513 -24232143 - R1_DM LINE R1 -5293 63 1 7 621 6498 25 2 0 chrUextra 4772546 4773342 -24231314 - R1_DM LINE R1 0 5356 4559 7 621 2226 198 43 29 chrUextra 4773454 4774104 -24230552 - HETA LINE telomeric -1968 4113 3455 7 621 1295 130 82 8 chrUextra 4774102 4774358 -24230298 - HETA LINE telomeric -602 5479 5205 7 621 7843 1 1 0 chrUextra 4774458 4775358 -24229298 + LSU-rRNA_Dme rRNA rRNA 2237 3137 -763 7 621 3522 172 19 27 chrUextra 4775466 4776366 -24228290 - SAR_DM Satellite Satellite -313 1159 267 7 621 3354 186 15 25 chrUextra 4776466 4777370 -24227286 + SAR_DM Satellite Satellite 1 894 -216 7 621 477 217 8 16 chrUextra 4777632 4777754 -24226902 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 192 40 0 0 chrUextra 4777754 4777779 -24226877 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 621 655 186 7 14 chrUextra 4777910 4778052 -24226604 - HETRP_DM Satellite Satellite -203 1669 1529 7 621 648 217 0 32 chrUextra 4778188 4778345 -24226311 - HETRP_DM Satellite Satellite -203 1669 1518 7 621 5123 87 63 10 chrUextra 4778474 4779284 -24225372 + Invader1_I LTR Gypsy 2285 3137 -49 7 621 270 139 0 0 chrUextra 4779335 4779378 -24225278 + Invader1_I LTR Gypsy 3137 3179 -7 7 621 2613 3 9 0 chrUextra 4779481 4779796 -24224860 + DOC2_DM LINE Jockey 1144 1461 -3332 7 621 2945 40 3 18 chrUextra 4779792 4780176 -24224480 + G5A_DM LINE Jockey 2461 2838 -3 7 621 349 269 0 0 chrUextra 4780202 4780310 -24224346 - Gypsy7_I LTR Gypsy -3317 1667 1560 7 621 5211 83 95 30 chrUextra 4780482 4781386 -24223270 + BATUMI_I LTR Pao 795 1757 -6206 7 621 2427 0 7 10 chrUextra 4781486 4781781 -24222875 - Copia_I LTR Copia -4299 294 1 7 621 2249 4 4 0 chrUextra 4781781 4782056 -24222600 - Copia_LTR LTR Copia 0 276 1 7 621 499 115 31 0 chrUextra 4782133 4782229 -24222427 - PROTOP DNA P -861 3619 3521 7 621 3244 188 16 18 chrUextra 4782490 4783394 -24221262 + SAR_DM Satellite Satellite 1 901 -208 7 621 3703 179 14 25 chrUextra 4783499 4784396 -24220260 - SAR_DM Satellite Satellite -216 1256 369 7 621 3365 2 5 0 chrUextra 4784498 4784911 -24219745 - LSU-rRNA_Dme rRNA rRNA -3140 760 346 7 621 1930 0 0 0 chrUextra 4784926 4785148 -24219508 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 7 621 21 95 0 0 chrUextra 4785160 4785223 -24219433 + AT_rich Low_complexity Low_complexity 1 63 0 7 621 1630 32 20 4 chrUextra 4785502 4785751 -24218905 + STALKER4_I LTR Gypsy 6278 6530 0 7 621 1961 4 0 0 chrUextra 4785751 4785979 -24218677 + STALKER4_LTR LTR Gypsy 1 228 -174 7 621 2852 81 5 2 chrUextra 4785983 4786405 -24218251 + S_DM DNA Tc1 764 1186 -550 7 621 7167 33 29 0 chrUextra 4786505 4787408 -24217248 + R1_DM LINE R1 1197 2125 -3231 7 621 776 176 25 25 chrUextra 4787579 4787788 -24216868 - DNAREP1_DM LINE Penelope -262 332 117 7 621 967 115 19 0 chrUextra 4787851 4788008 -24216648 - DNAREP1_DM LINE Penelope -429 165 6 7 621 824 261 18 108 chrUextra 4788772 4789224 -24215432 - Invader3_I LTR Gypsy -1735 3153 2743 7 621 40 49 0 0 chrUextra 4789524 4789585 -24215071 + AT_rich Low_complexity Low_complexity 1 61 0 7 621 26 50 0 0 chrUextra 4789815 4789855 -24214801 + AT_rich Low_complexity Low_complexity 1 40 0 7 621 272 207 23 0 chrUextra 4790250 4790329 -24214327 + PROTOP_A DNA P 43 124 -981 7 621 870 27 0 0 chrUextra 4790517 4790627 -24214029 + ARS406_DM Unknown Unknown 80 189 -164 7 621 3427 191 16 21 chrUextra 4790536 4791420 -24213236 - SAR_DM Satellite Satellite -216 1256 378 7 621 3893 66 13 7 chrUextra 4791523 4792423 -24212233 + HETA LINE telomeric 3870 4338 -1743 7 621 4506 56 2 0 chrUextra 4792524 4793115 -24211541 + ZAM_I LTR Gypsy 1311 1902 -5588 7 621 1314 62 302 0 chrUextra 4793116 4793421 -24211235 + ZAM_I LTR Gypsy 2323 2719 -4771 7 621 28 48 0 0 chrUextra 4793594 4793636 -24211020 + AT_rich Low_complexity Low_complexity 1 42 0 7 621 488 119 36 0 chrUextra 4793909 4793993 -24210663 - NTS_DM Other Other -150 90 4 7 621 1290 12 0 18 chrUextra 4794103 4794268 -24210388 - NTS_DM Other Other -78 162 1 7 621 1112 6 25 19 chrUextra 4794268 4794429 -24210227 - NTS_DM Other Other 0 240 79 7 621 802 284 14 14 chrUextra 4794538 4794820 -24209836 - BS2 LINE Jockey -2142 2579 2298 7 621 4627 47 12 0 chrUextra 4794837 4795432 -24209224 - BS3_DM LINE Jockey -776 1014 413 7 621 1431 0 0 0 chrUextra 4795532 4795691 -24208965 + (CACAA)n Simple_repeat Simple_repeat 5 163 0 7 621 423 100 0 0 chrUextra 4795707 4795777 -24208879 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 621 2970 17 0 0 chrUextra 4795777 4796133 -24208523 + MDG1_LTR LTR Gypsy 87 442 0 7 621 2599 0 0 0 chrUextra 4796133 4796435 -24208221 + MDG1_I LTR Gypsy 1 302 -6294 7 621 3898 58 19 4 chrUextra 4797539 4798072 -24206584 + R1_DM LINE R1 193 733 -4623 7 621 2893 56 0 0 chrUextra 4798068 4798441 -24206215 + R1_DM LINE R1 1224 1596 -3760 7 621 2429 94 7 52 chrUextra 4798555 4799444 -24205212 + DMSAT6 Satellite Satellite 1 848 0 7 621 537 182 81 51 chrUextra 4799954 4800151 -24204505 + DMCR1A LINE CR1 4227 4429 -41 7 621 21 0 0 0 chrUextra 4800273 4800294 -24204362 + AT_rich Low_complexity Low_complexity 1 21 0 7 621 2231 127 19 31 chrUextra 4800551 4801446 -24203210 - DMSAT6 Satellite Satellite -30 883 1 7 621 3407 190 29 20 chrUextra 4801550 4802453 -24202203 + SAR_DM Satellite Satellite 298 1208 -264 7 621 7613 2 1 2 chrUextra 4803556 4804459 -24200197 + G6_DM LINE Jockey 1024 1925 -117 7 621 2100 172 9 5 chrUextra 4804575 4805461 -24199195 + SAR_DM Satellite Satellite 1 889 -694 7 621 913 291 3 6 chrUextra 4805592 4805910 -24198746 - MICROPIA_I LTR Gypsy -2746 1730 1414 7 621 833 71 79 0 chrUextra 4805908 4806034 -24198622 + Gypsy7_I LTR Gypsy 3199 3334 -1650 7 621 2224 35 10 0 chrUextra 4806035 4806325 -24198331 + Gypsy7_I LTR Gypsy 3615 3907 -1077 7 621 7551 6 24 0 chrUextra 4806563 4807465 -24197191 - STALKER4_I LTR Gypsy -2281 4249 3326 7 621 1065 144 64 5 chrUextra 4807665 4807868 -24196788 + DNAREP1_DM LINE Penelope 22 236 -358 7 621 212 0 0 35 chrUextra 4807920 4807949 -24196707 + (TAA)n Simple_repeat Simple_repeat 2 29 0 7 621 21 0 0 0 chrUextra 4808017 4808038 -24196618 + AT_rich Low_complexity Low_complexity 1 21 0 7 621 7267 30 1 0 chrUextra 4808567 4809469 -24195187 - R1_DM LINE R1 -2334 3022 2120 7 621 1789 81 3 34 chrUextra 4809599 4809893 -24194763 + PROTOP_B DNA P 194 478 -675 7 621 4366 68 0 3 chrUextra 4809870 4810471 -24194185 + HOBO DNA hAT 330 928 -2088 7 621 7464 12 40 0 chrUextra 4810571 4811473 -24193183 - Gypsy6_I LTR Gypsy -3566 3446 2509 7 621 626 40 0 0 chrUextra 4811573 4811674 -24192982 - PROTOP_B DNA P -395 758 658 7 621 29 0 0 0 chrUextra 4811674 4811703 -24192953 + AT_rich Low_complexity Low_complexity 1 29 0 7 621 1274 25 0 0 chrUextra 4811717 4811875 -24192781 - PROTOP_B DNA P -843 310 154 7 621 3664 43 150 5 chrUextra 4811889 4812475 -24192181 + Copia2_I LTR Copia 334 1004 -3158 7 621 21 0 0 0 chrUextra 4812601 4812622 -24192034 + AT_rich Low_complexity Low_complexity 1 21 0 7 621 2583 65 130 134 chrUextra 4812722 4813052 -24191604 + ROO_I LTR Pao 258 640 -7616 7 621 294 106 0 0 chrUextra 4813052 4813099 -24191557 + (CAG)n Simple_repeat Simple_repeat 1 47 0 7 621 2583 63 149 149 chrUextra 4813099 4813477 -24191179 + ROO_I LTR Pao 641 1056 -7200 7 621 297 127 0 98 chrUextra 4813577 4813638 -24191018 - HETRP_DM Satellite Satellite -300 1572 1518 7 621 649 217 0 32 chrUextra 4813755 4813912 -24190744 - HETRP_DM Satellite Satellite -203 1669 1518 7 621 477 217 8 16 chrUextra 4814029 4814151 -24190505 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 192 40 0 0 chrUextra 4814151 4814176 -24190480 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 621 607 200 7 14 chrUextra 4814334 4814476 -24190180 - HETRP_DM Satellite Satellite -203 1669 1529 7 621 281 194 40 0 chrUextra 4815397 4815475 -24189181 + PROTOP_A DNA P 43 124 -981 7 621 7037 27 4 13 chrUextra 4815582 4816482 -24188174 - R1_DM LINE R1 -120 5236 4345 7 621 3781 11 0 0 chrUextra 4816583 4817024 -24187632 - DOC LINE Jockey -4261 464 24 7 621 1811 194 2 2 chrUextra 4817071 4817485 -24187171 - SAR_DM Satellite Satellite -535 937 524 7 621 5757 12 10 0 chrUextra 4817585 4818275 -24186381 + DMRT1A LINE R1 4485 5181 -2 7 621 5216 75 111 21 chrUextra 4818587 4819483 -24185173 + TART_B1 LINE telomeric 3163 4139 -6515 7 621 456 111 0 0 chrUextra 4819589 4819661 -24184995 + FW_DM LINE Jockey 2123 2194 -2498 7 621 2725 147 2 14 chrUextra 4819663 4820152 -24184504 + FW_DM LINE Jockey 2641 3123 -1569 7 621 1373 100 10 39 chrUextra 4820180 4820491 -24184165 - DMSAT6 Satellite Satellite -35 435 134 7 621 2259 96 0 0 chrUextra 4822129 4822495 -24182161 - S_DM DNA Tc1 0 1736 1371 7 621 1847 9 5 0 chrUextra 4822595 4822816 -24181840 - ROO_I LTR Pao -8034 222 1 7 621 3742 2 0 0 chrUextra 4822816 4823244 -24181412 - ROO_LTR LTR Pao 0 428 1 7 621 4933 95 50 86 chrUextra 4823597 4824495 -24180161 + Gypsy12_I LTR Gypsy 956 1821 -3725 7 621 1924 36 7 32 chrUextra 4824599 4824884 -24179772 + BATUMI_I LTR Pao 7007 7284 -679 7 621 4568 32 5 13 chrUextra 4824903 4825500 -24179156 + BATUMI_I LTR Pao 1785 2376 -5587 7 621 7587 2 17 0 chrUextra 4825601 4826503 -24178153 - DM412 LTR Gypsy -3472 3425 2509 7 621 3172 196 32 20 chrUextra 4826603 4827505 -24177151 + SAR_DM Satellite Satellite 59 971 -501 7 621 7615 1 8 2 chrUextra 4827605 4828507 -24176149 + DOC LINE Jockey 1344 2250 -2475 7 621 3375 198 9 18 chrUextra 4828612 4829493 -24175163 - SAR_DM Satellite Satellite -354 1118 246 7 621 272 258 22 0 chrUextra 4829418 4829507 -24175149 + XDMR_DM Unknown Unknown 6 96 -264 7 621 6620 42 9 2 chrUextra 4829612 4830500 -24174156 + DOC2_DM LINE Jockey 747 1640 -3153 7 621 2410 192 51 66 chrUextra 4830611 4831402 -24173254 + SAR_DM Satellite Satellite 298 1076 -396 7 621 382 165 93 0 chrUextra 4831416 4831513 -24173143 + SAR_DM Satellite Satellite 547 652 -820 7 621 7228 20 1 13 chrUextra 4831613 4832515 -24172141 + G2_DM LINE Jockey 140 1030 -2072 7 621 3318 189 20 22 chrUextra 4832615 4833502 -24171154 + SAR_DM Satellite Satellite 380 1264 -208 7 621 823 54 0 0 chrUextra 4833405 4833517 -24171139 - ARS406_DM Unknown Unknown -164 189 78 7 621 7359 21 0 0 chrUextra 4833617 4834519 -24170137 - ACCORD2_I LTR Gypsy -4538 2674 1773 7 621 3766 7 0 2 chrUextra 4834619 4835060 -24169596 + STALKER4_I LTR Gypsy 3801 4240 -2290 7 621 3582 19 83 0 chrUextra 4835052 4835521 -24169135 + STALKER4_I LTR Gypsy 4654 5161 -1369 7 621 1165 97 6 0 chrUextra 4835621 4835797 -24168859 + BS3_DM LINE Jockey 868 1044 -746 7 621 1765 68 0 0 chrUextra 4835787 4836023 -24168633 + BS3_DM LINE Jockey 1311 1546 -244 7 621 3305 84 2 6 chrUextra 4836031 4836523 -24168133 + DM297_I LTR Gypsy 2179 2668 -3499 7 621 3243 197 41 19 chrUextra 4836623 4837520 -24167136 + SAR_DM Satellite Satellite 301 1217 -255 7 621 2428 96 10 34 chrUextra 4837625 4838526 -24166130 - DMSAT6 Satellite Satellite -100 879 1 7 621 501 208 8 16 chrUextra 4838626 4838748 -24165908 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 264 30 0 0 chrUextra 4838748 4838781 -24165875 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 621 681 179 7 14 chrUextra 4838910 4839052 -24165604 - HETRP_DM Satellite Satellite -203 1669 1529 7 621 494 202 16 16 chrUextra 4839203 4839324 -24165332 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 282 29 0 0 chrUextra 4839324 4839359 -24165297 + (TC)n Simple_repeat Simple_repeat 2 36 0 7 621 859 90 0 0 chrUextra 4839627 4839760 -24164896 - ARS406_DM Unknown Unknown -220 133 1 7 621 3433 186 14 14 chrUextra 4839667 4840528 -24164128 + SAR_DM Satellite Satellite 195 1055 -417 7 621 1505 188 148 46 chrUextra 4840725 4841410 -24163246 + Gypsy12_LTR LTR Gypsy 921 1675 -661 7 621 275 209 35 52 chrUextra 4841412 4841528 -24163128 + Gypsy12_LTR LTR Gypsy 1396 1509 -827 7 621 3335 190 44 16 chrUextra 4841634 4842530 -24162126 - SAR_DM Satellite Satellite -396 920 1 7 621 198 0 0 0 chrUextra 4843088 4843110 -24161546 + (TTG)n Simple_repeat Simple_repeat 2 23 0 7 621 2094 42 14 0 chrUextra 4843243 4843531 -24161125 + PROTOP DNA P 232 523 -3957 7 621 303 82 65 16 chrUextra 4843643 4843705 -24160951 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 7 621 7316 16 4 0 chrUextra 4844632 4845533 -24159123 + PROTOP DNA P 2788 3692 -788 7 621 3867 39 18 20 chrUextra 4845633 4846179 -24158477 + BATUMI_I LTR Pao 6457 7001 -962 7 621 2805 12 0 0 chrUextra 4846205 4846534 -24158122 - BATUMI_I LTR Pao -1543 6420 6092 7 621 3594 189 19 25 chrUextra 4846634 4847534 -24157122 + SAR_DM Satellite Satellite 1 894 -208 7 621 3109 198 41 11 chrUextra 4847635 4848536 -24156120 - SAR_DM Satellite Satellite -1045 928 1 7 621 3659 202 8 18 chrUextra 4848639 4849537 -24155119 - SAR_DM Satellite Satellite -435 889 1 7 77 7410 19 13 0 chrUextra 4849637 4850538 -24154118 - R1_DM LINE R1 -2654 2702 1790 7 622 898 37 123 22 chrUextra 4850638 4850773 -24153883 - BATUMI_I LTR Pao -813 7150 7002 7 622 2412 14 0 7 chrUextra 4850773 4851069 -24153587 - BATUMI_I LTR Pao 0 7963 7670 7 622 3666 24 0 13 chrUextra 4851078 4851539 -24153117 - BATUMI_I LTR Pao -1884 6079 5625 7 622 1647 199 38 17 chrUextra 4851639 4852057 -24152599 - HETA LINE telomeric -1635 4446 4020 7 622 27 62 0 0 chrUextra 4852198 4852246 -24152410 + AT_rich Low_complexity Low_complexity 1 48 0 7 622 371 181 75 19 chrUextra 4852291 4852398 -24152258 + Copia_I LTR Copia 4401 4513 -80 7 622 1449 276 31 39 chrUextra 4852649 4853541 -24151115 + SAR_DM Satellite Satellite 1 885 -396 7 622 669 110 0 0 chrUextra 4853641 4853750 -24150906 - ARS406_DM Unknown Unknown -244 109 1 7 622 3490 198 8 9 chrUextra 4853657 4854540 -24150116 + SAR_DM Satellite Satellite 195 1076 -396 7 622 926 27 0 0 chrUextra 4854642 4854753 -24149903 - R1_DM LINE R1 -3 5353 5243 7 622 3989 22 4 0 chrUextra 4854750 4855241 -24149415 - R1_DM LINE R1 -290 5066 4574 7 622 2423 30 7 0 chrUextra 4855238 4855543 -24149113 - R1_DM LINE R1 -1121 4235 3929 7 622 7002 37 27 0 chrUextra 4855643 4856544 -24148112 - R1_DM LINE R1 -1771 3585 2661 7 622 2831 74 22 175 chrUextra 4856910 4857545 -24147111 + CIRCE LINE Composite 4981 5518 -838 7 622 1047 194 4 0 chrUextra 4857645 4857903 -24146753 - ROVER-I_DM LTR Gypsy -336 6248 5990 7 622 3071 166 2 20 chrUextra 4857938 4858546 -24146110 - ROVER-I_DM LTR Gypsy -1276 5308 4712 7 622 3504 184 10 20 chrUextra 4858659 4859543 -24145113 - SAR_DM Satellite Satellite -352 1120 246 7 622 6270 101 0 0 chrUextra 4859650 4860548 -24144108 + Gypsy12_I LTR Gypsy 3502 4399 -1147 7 622 4947 22 16 2 chrUextra 4860648 4861272 -24143384 - G_DM LINE Jockey -3713 633 1 7 622 226 103 25 25 chrUextra 4861345 4861385 -24143271 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 622 246 150 0 0 chrUextra 4861437 4861477 -24143179 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 622 7121 41 8 2 chrUextra 4861650 4862550 -24142106 + BS2 LINE Jockey 2796 3700 -1021 7 622 3150 201 15 20 chrUextra 4862652 4863546 -24141110 + SAR_DM Satellite Satellite 1 889 -208 7 622 5537 68 14 69 chrUextra 4863651 4864552 -24140104 + CIRCE LINE Composite 1380 2231 -4125 7 622 2271 269 41 55 chrUextra 4864653 4865552 -24139104 + Gypsy2_I LTR Gypsy 4183 5069 -1066 7 622 5396 25 0 1 chrUextra 4865652 4866319 -24138337 + FW_DM LINE Jockey 4027 4692 0 7 622 843 54 0 0 chrUextra 4866320 4866431 -24138225 - BATUMI_I LTR Pao -1426 6537 6427 7 622 734 87 0 0 chrUextra 4866437 4866552 -24138104 + BATUMI_I LTR Pao 7298 7412 -551 7 622 7297 21 27 0 chrUextra 4866652 4867552 -24137104 - FW_DM LINE Jockey -3673 1019 96 7 622 21 89 0 0 chrUextra 4867770 4867826 -24136830 + AT_rich Low_complexity Low_complexity 1 56 0 7 622 1590 26 0 10 chrUextra 4868354 4868551 -24136105 - PROTOP DNA P 0 4480 4286 7 622 5118 103 62 29 chrUextra 4868652 4869550 -24135106 - Gypsy12_I LTR Gypsy -4425 1121 194 7 622 1476 48 24 0 chrUextra 4869652 4869862 -24134794 + QUASIMODO_I LTR Gypsy 4960 5174 -886 7 622 995 29 0 0 chrUextra 4869874 4870014 -24134642 + QUASIMODO_I LTR Gypsy 5493 5632 -428 7 622 2400 68 26 9 chrUextra 4870015 4870354 -24134302 + QUASIMODO_LTR LTR Gypsy 314 658 0 7 622 2785 0 6 0 chrUextra 4870652 4870974 -24133682 - ROO_LTR LTR Pao -100 328 5 7 622 386 77 0 44 chrUextra 4870974 4871042 -24133614 + (TAA)n Simple_repeat Simple_repeat 2 66 0 7 622 1343 152 93 13 chrUextra 4871044 4871344 -24133312 + MDG1_LTR LTR Gypsy 89 412 -30 7 622 666 259 14 10 chrUextra 4871345 4871552 -24133104 + BS2 LINE Jockey 2721 2928 -1793 7 622 354 45 0 0 chrUextra 4871951 4871995 -24132661 + (GAGAA)n Simple_repeat Simple_repeat 3 46 0 7 622 3139 183 18 45 chrUextra 4872652 4873552 -24131104 - SAR_DM Satellite Satellite -504 875 1 7 622 1747 75 7 39 chrUextra 4873652 4873931 -24130725 - HETA LINE telomeric -3918 2163 1894 7 622 3006 76 39 149 chrUextra 4873930 4874552 -24130104 - HETA LINE telomeric -4524 1557 1005 7 622 884 90 0 38 chrUextra 4874903 4875087 -24129569 + (TCTTG)n Simple_repeat Simple_repeat 1 177 0 7 622 1336 0 0 53 chrUextra 4875101 4875290 -24129366 + (TCTTG)n Simple_repeat Simple_repeat 2 180 0 7 622 2916 14 0 0 chrUextra 4875654 4875998 -24128658 + R1_DM LINE R1 5013 5356 0 7 622 270 127 77 31 chrUextra 4875998 4876063 -24128593 + DM176_LTR LTR Gypsy 227 294 -213 7 622 245 220 0 0 chrUextra 4876193 4876252 -24128404 + DM176_LTR LTR Gypsy 308 366 -141 7 622 568 164 40 16 chrUextra 4876269 4876393 -24128263 + DMTOM1_LTR LTR Gypsy 284 410 0 7 622 372 86 14 54 chrUextra 4876393 4876458 -24128198 + DMTOM1_LTR LTR Gypsy 349 410 0 7 622 660 68 0 0 chrUextra 4876464 4876552 -24128104 - MDG1_I LTR Gypsy -5818 778 691 7 622 381 159 0 0 chrUextra 4876654 4876723 -24127933 - PROTOP DNA P -453 4027 3959 7 622 237 119 24 0 chrUextra 4876722 4876764 -24127892 - PROTOP DNA P -3565 915 873 7 622 1260 153 8 24 chrUextra 4877295 4877550 -24127106 - PROTOP_B DNA P -4 1149 899 7 622 3233 191 20 13 chrUextra 4878653 4879552 -24125104 + SAR_DM Satellite Satellite 1 905 -208 7 622 1008 103 0 0 chrUextra 4881123 4881547 -24123109 + (TAA)n Simple_repeat Simple_repeat 1 424 0 7 622 6875 29 8 18 chrUextra 4881652 4882552 -24122104 + BATUMI_I LTR Pao 980 1870 -6093 7 622 4395 0 0 0 chrUextra 4882653 4883188 -24121468 - DM176_I LTR Gypsy -475 5945 5411 7 622 3164 0 0 0 chrUextra 4883186 4883552 -24121104 - DM176_I LTR Gypsy -2772 3648 3283 7 622 1401 30 0 0 chrUextra 4883652 4883821 -24120835 + PROTOP DNA P 4278 4446 -34 7 622 1777 45 0 0 chrUextra 4883819 4884040 -24120616 + PROTOP DNA P 4260 4480 0 7 622 26 30 0 0 chrUextra 4884411 4884444 -24120212 + AT_rich Low_complexity Low_complexity 1 33 0 7 622 23 68 0 0 chrUextra 4884490 4884534 -24120122 + AT_rich Low_complexity Low_complexity 1 44 0 7 622 26 30 0 0 chrUextra 4885043 4885076 -24119580 + AT_rich Low_complexity Low_complexity 1 33 0 7 622 23 68 0 0 chrUextra 4885122 4885166 -24119490 + AT_rich Low_complexity Low_complexity 1 44 0 7 622 4499 26 0 0 chrUextra 4885652 4886197 -24118459 - R1_DM LINE R1 -669 4687 4143 7 622 2920 8 3 3 chrUextra 4886200 4886552 -24118104 - R1_DM LINE R1 -1469 3887 3536 7 622 7014 22 77 0 chrUextra 4886652 4887552 -24117104 - R1_DM LINE R1 -1768 3588 2620 7 622 3193 90 59 19 chrUextra 4887652 4888174 -24116482 - BS LINE Jockey -4575 551 9 7 622 508 122 100 0 chrUextra 4889347 4889437 -24115219 + DNAREP1_DM LINE Penelope 496 594 0 7 622 33 25 0 0 chrUextra 4889491 4889531 -24115125 + AT_rich Low_complexity Low_complexity 1 40 0 7 622 1632 94 8 24 chrUextra 4889652 4889902 -24114754 - TART LINE telomeric -8909 5568 5323 7 622 1906 143 3 18 chrUextra 4889882 4890223 -24114433 - TART LINE telomeric -10594 3883 3548 7 622 1310 6 90 0 chrUextra 4890221 4890377 -24114279 - PROTOP_B DNA P -983 170 1 7 622 3211 26 0 30 chrUextra 4890652 4891050 -24113606 - CIRCE LINE Composite -3547 2809 2424 7 622 4319 20 0 0 chrUextra 4891050 4891552 -24113104 - PROTOP_A DNA P 0 1105 604 7 622 7943 18 2 0 chrUextra 4891652 4892551 -24112105 - MAX_I LTR Pao -1311 6603 5703 7 622 5327 23 49 1 chrUextra 4892652 4893308 -24111348 - R1_DM LINE R1 -1179 4177 3491 7 622 1985 33 0 0 chrUextra 4893310 4893550 -24111106 - R1_DM LINE R1 -2388 2968 2729 7 622 843 325 4 1 chrUextra 4893656 4893991 -24110665 + Gypsy_DS LTR Gypsy 5499 5791 -1731 7 622 823 335 59 30 chrUextra 4894003 4894529 -24110127 + GTWIN_I LTR Gypsy 5578 6118 -303 7 622 3012 3 0 0 chrUextra 4894652 4894984 -24109672 + QUASIMODO_LTR LTR Gypsy 327 658 0 7 622 2794 5 100 0 chrUextra 4894984 4895552 -24109104 + QUASIMODO_I LTR Gypsy 1 625 -5435 7 622 4315 0 0 11 chrUextra 4895655 4896133 -24108523 + HOBO DNA hAT 2544 3016 0 7 622 5603 5 0 9 chrUextra 4896652 4897302 -24107354 + DOC LINE Jockey 4079 4722 -3 7 622 1272 154 12 8 chrUextra 4897302 4897551 -24107105 + SAR_DM Satellite Satellite 334 583 -889 7 622 514 28 0 141 chrUextra 4898098 4898304 -24106352 + T-rich Low_complexity Low_complexity 4 180 0 7 622 524 28 0 137 chrUextra 4898316 4898521 -24106135 + T-rich Low_complexity Low_complexity 4 180 0 7 622 996 17 9 0 chrUextra 4899188 4899304 -24105352 + DMRT1A LINE R1 346 462 -4721 7 622 1921 20 172 0 chrUextra 4899308 4899552 -24105104 - DMRT1A LINE R1 -2537 2646 2361 7 622 386 59 0 0 chrUextra 4899744 4899795 -24104861 + Transib5 DNA Transib 5 55 -2946 7 622 3546 26 76 46 chrUextra 4899793 4900319 -24104337 + Transib5 DNA Transib 181 722 -2279 7 622 2005 29 0 4 chrUextra 4900306 4900551 -24104105 + Transib5 DNA Transib 2099 2342 -659 7 622 3764 199 5 20 chrUextra 4900651 4901547 -24103109 + SAR_DM Satellite Satellite 209 1090 -382 7 622 5937 88 9 11 chrUextra 4901650 4902549 -24102107 - BATUMI_I LTR Pao -3366 4548 3592 7 622 6841 57 29 0 chrUextra 4902649 4903548 -24101108 - IDEFIX_I LTR Gypsy -4155 1473 549 7 622 7819 11 6 1 chrUextra 4903648 4904547 -24100109 - STALKER4_I LTR Gypsy -1545 4985 4083 7 622 2661 159 10 8 chrUextra 4904648 4905541 -24099115 - SAR_DM Satellite Satellite -620 894 1 7 622 6094 19 93 0 chrUextra 4905646 4906545 -24098111 - ROO_I LTR Pao -1148 7108 6126 7 622 5203 10 1 3 chrUextra 4906645 4907544 -24097112 + DOC LINE Jockey 3171 4143 -582 7 622 2177 29 117 0 chrUextra 4907644 4908090 -24096566 + R1_DM LINE R1 4194 4691 -665 7 622 1618 59 0 5 chrUextra 4908080 4908286 -24096370 + R1_DM LINE R1 5034 5238 -118 7 622 1364 62 0 17 chrUextra 4908269 4908450 -24096206 + R1_DM LINE R1 224 401 -4955 7 622 616 85 0 0 chrUextra 4908461 4908543 -24096113 + R1_DM LINE R1 721 802 -4554 7 622 647 141 25 8 chrUextra 4908695 4908817 -24095839 - STALKER4_I LTR Gypsy -5649 881 758 7 622 1208 170 89 72 chrUextra 4908881 4909242 -24095414 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 622 7596 11 0 11 chrUextra 4909642 4910541 -24094115 + QUASIMODO_I LTR Gypsy 1259 2147 -3913 7 622 3292 3 0 0 chrUextra 4910641 4911001 -24093655 + ROO_LTR LTR Pao 69 428 0 7 622 226 0 0 0 chrUextra 4911001 4911032 -24093624 + NTS_DM Other Other 103 133 -107 7 622 1304 18 0 6 chrUextra 4911032 4911197 -24093459 + NTS_DM Other Other 38 201 -39 7 622 907 9 0 27 chrUextra 4911249 4911361 -24093295 + NTS_DM Other Other 25 133 -107 7 622 1264 30 0 6 chrUextra 4911361 4911526 -24093130 + NTS_DM Other Other 38 201 -39 7 622 888 266 78 28 chrUextra 4911651 4912046 -24092610 - G_DM LINE Jockey -3559 787 373 7 622 247 62 0 0 chrUextra 4912277 4912309 -24092347 + NTS_DM Other Other 2 33 -207 7 622 21 0 0 0 chrUextra 4912325 4912346 -24092310 + AT_rich Low_complexity Low_complexity 1 21 0 7 622 291 131 16 16 chrUextra 4912644 4912706 -24091950 + DM297_I LTR Gypsy 3159 3220 -2947 7 622 416 252 17 17 chrUextra 4912678 4912795 -24091861 + DM297_I LTR Gypsy 3378 3494 -2673 7 622 2601 258 15 12 chrUextra 4912795 4913537 -24091119 + TOM_I LTR Gypsy 4557 5300 -812 7 622 4306 57 12 12 chrUextra 4913638 4914220 -24090436 - MDG1_I LTR Gypsy -614 5982 5401 7 622 2343 52 19 6 chrUextra 4914225 4914537 -24090119 - DM297_I LTR Gypsy -1816 4351 4036 7 622 3912 178 11 11 chrUextra 4914637 4915509 -24089147 + SAR_DM Satellite Satellite 205 1076 -396 7 622 3621 186 17 24 chrUextra 4915636 4916519 -24088137 - SAR_DM Satellite Satellite -270 1202 326 7 622 51 31 0 0 chrUextra 4916692 4916757 -24087899 + AT_rich Low_complexity Low_complexity 1 65 0 7 622 220 141 46 15 chrUextra 4917251 4917316 -24087340 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 622 21 0 0 0 chrUextra 4918376 4918397 -24086259 + AT_rich Low_complexity Low_complexity 1 21 0 7 622 4538 21 2 0 chrUextra 4918633 4919161 -24085495 - PROTOP_A DNA P -576 529 1 7 622 7560 20 4 4 chrUextra 4919632 4920531 -24084125 + ROO_I LTR Pao 924 1822 -6434 7 622 5358 152 18 2 chrUextra 4920631 4921530 -24083126 + HETA LINE telomeric 1337 2249 -3832 7 622 1446 23 0 0 chrUextra 4921630 4921802 -24082854 - Stalker3_LTR LTR Gypsy -200 172 1 7 622 6509 7 0 1 chrUextra 4921802 4922529 -24082127 - Gypsy4_I LTR Gypsy -3995 2293 1568 7 622 3629 192 16 24 chrUextra 4922629 4923515 -24081141 - SAR_DM Satellite Satellite -224 1248 370 7 622 1073 269 9 9 chrUextra 4923628 4923944 -24080712 + Gypsy6_I LTR Gypsy 6552 6840 -172 7 622 254 286 0 0 chrUextra 4923928 4923998 -24080658 + Gypsy2_I LTR Gypsy 5975 6044 -91 7 622 272 175 117 58 chrUextra 4924012 4924115 -24080541 + Gypsy2_LTR LTR Gypsy 95 203 -150 7 622 337 193 0 35 chrUextra 4924238 4924324 -24080332 + DNAREP1_DM LINE Penelope 486 568 -26 7 622 1024 62 69 0 chrUextra 4924343 4924503 -24080153 - S2_DM DNA Tc1 -1564 171 1 7 622 3768 185 18 19 chrUextra 4924632 4925526 -24079130 - SAR_DM Satellite Satellite -478 893 1 7 622 1234 7 0 0 chrUextra 4925626 4925767 -24078889 - NTS_DM Other Other -99 141 1 7 622 1926 4 17 13 chrUextra 4925767 4926006 -24078650 - NTS_DM Other Other 0 240 1 7 622 1557 10 20 15 chrUextra 4926006 4926208 -24078448 - NTS_DM Other Other 0 240 38 7 622 1148 15 0 0 chrUextra 4926208 4926341 -24078315 - NTS_DM Other Other -107 133 1 7 622 1274 22 22 22 chrUextra 4926341 4926525 -24078131 - NTS_DM Other Other 0 240 57 7 622 1436 53 0 36 chrUextra 4926625 4926821 -24077835 - Baggins1 LINE LOA -2532 2921 2733 7 622 2529 35 82 0 chrUextra 4927205 4927524 -24077132 - Baggins1 LINE LOA 0 5453 5109 7 622 2565 54 12 9 chrUextra 4927897 4928234 -24076422 - DMRT1A LINE R1 -11 5172 4835 7 622 2624 23 0 0 chrUextra 4928215 4928521 -24076135 + Transib5 DNA Transib 997 1302 -1699 7 622 771 11 0 0 chrUextra 4928623 4928712 -24075944 - Gypsy4_LTR LTR Gypsy -198 89 1 7 622 1373 111 71 158 chrUextra 4928821 4929143 -24075513 + HOBO DNA hAT 23 316 -2700 7 622 1793 101 190 18 chrUextra 4929144 4929522 -24075134 + PROTOP_B DNA P 17 459 -694 7 622 795 50 0 0 chrUextra 4929624 4929723 -24074933 + ARS406_DM Unknown Unknown 91 189 -164 7 622 3861 182 15 19 chrUextra 4929642 4930521 -24074135 - SAR_DM Satellite Satellite -225 1247 373 7 622 1767 71 20 26 chrUextra 4930621 4930937 -24073719 - HETA LINE telomeric -5514 567 1 7 622 3040 145 7 19 chrUextra 4930940 4931482 -24073174 - TAHRE LINE telomeric -13 10450 9915 7 622 704 314 29 17 chrUextra 4931624 4931968 -24072688 + Gypsy4_I LTR Gypsy 3126 3473 -2815 7 622 537 16 0 0 chrUextra 4932619 4932681 -24071975 + PROTOP_B DNA P 1092 1153 0 7 622 3811 26 0 26 chrUextra 4932681 4933147 -24071509 + CIRCE LINE Composite 2424 2877 -3479 7 622 2793 36 5 42 chrUextra 4933138 4933517 -24071139 + CIRCE LINE Composite 1908 2272 -4084 7 622 248 0 0 0 chrUextra 4933617 4933644 -24071012 + Invader4_LTR LTR Gypsy 320 346 0 7 622 228 190 84 52 chrUextra 4933843 4933998 -24070658 + (CTATT)n Simple_repeat Simple_repeat 5 164 0 7 622 295 177 88 35 chrUextra 4934307 4934477 -24070179 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 7 622 215 313 0 0 chrUextra 4934408 4934507 -24070149 + T-rich Low_complexity Low_complexity 1 99 0 7 622 3945 178 9 11 chrUextra 4934615 4935496 -24069160 + SAR_DM Satellite Satellite 198 1076 -396 7 622 1206 21 0 0 chrUextra 4935948 4936093 -24068563 + (TATTG)n Simple_repeat Simple_repeat 2 146 0 7 622 7371 25 0 1 chrUextra 4936611 4937509 -24067147 - MDG3_I LTR Gypsy -2823 2163 1267 7 622 2138 12 39 4 chrUextra 4937609 4937867 -24066789 + QUASIMODO_LTR LTR Gypsy 392 658 0 7 622 2753 62 106 87 chrUextra 4937884 4938131 -24066525 + BATUMI_I LTR Pao 603 867 -7096 7 622 293 0 27 0 chrUextra 4938131 4938168 -24066488 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 7 622 2753 62 106 87 chrUextra 4938168 4938507 -24066149 + BATUMI_I LTR Pao 868 1199 -6764 7 622 3551 202 26 10 chrUextra 4938608 4939499 -24065157 - SAR_DM Satellite Satellite -242 1230 326 7 622 7665 20 47 0 chrUextra 4939605 4940503 -24064153 + MAX_I LTR Pao 3018 3957 -3957 7 622 4275 13 0 10 chrUextra 4940603 4941501 -24063155 + DOC LINE Jockey 2372 3526 -1199 7 622 7650 25 0 1 chrUextra 4941601 4942498 -24062158 - R1_DM LINE R1 -2146 3210 2315 7 622 3796 183 27 19 chrUextra 4942599 4943496 -24061160 + SAR_DM Satellite Satellite 256 1159 -313 7 622 1705 5 0 0 chrUextra 4944595 4944786 -24059870 - MICROPIA_LTR LTR Gypsy -54 422 232 7 622 2125 4 0 0 chrUextra 4944815 4945047 -24059609 - MICROPIA_LTR LTR Gypsy -244 232 1 7 622 3862 11 20 2 chrUextra 4945047 4945493 -24059163 - MICROPIA_I LTR Gypsy 0 4476 4023 7 622 4461 73 19 5 chrUextra 4945593 4946222 -24058434 - BATUMI_I LTR Pao -23 7940 7303 7 622 2001 32 12 0 chrUextra 4946245 4946491 -24058165 + BATUMI_I LTR Pao 6427 6675 -1288 7 622 2680 67 0 3 chrUextra 4946591 4946941 -24057715 + IDEFIX_I LTR Gypsy 3836 4184 -1444 7 622 1111 15 0 0 chrUextra 4946941 4947071 -24057585 + IDEFIX_LTR LTR Gypsy 1 130 -464 7 622 615 35 0 11 chrUextra 4947069 4947157 -24057499 + IDEFIX_LTR LTR Gypsy 508 594 0 7 622 436 55 19 0 chrUextra 4947157 4947229 -24057427 + MDG1_I LTR Gypsy 6543 6596 0 7 622 299 200 69 23 chrUextra 4947220 4947307 -24057349 + TABOR_LTR LTR Gypsy 1 91 -415 7 622 6509 102 32 0 chrUextra 4947589 4948487 -24056169 - Gypsy12_I LTR Gypsy -2141 3405 2479 7 622 3333 192 18 20 chrUextra 4948589 4948620 -24056036 + SAR_DM Satellite Satellite 1 34 -1413 7 622 837 40 0 0 chrUextra 4948620 4948720 -24055936 - ARS406_DM Unknown Unknown -164 189 90 7 622 3333 192 18 20 chrUextra 4948720 4949481 -24055175 + SAR_DM Satellite Satellite 35 889 -558 7 622 299 51 0 0 chrUextra 4949585 4949624 -24055032 + ARS406_DM Unknown Unknown 120 158 -195 7 622 2016 185 6 8 chrUextra 4949621 4950466 -24054190 - SAR_DM Satellite Satellite -558 843 1 7 622 4787 4 0 0 chrUextra 4950583 4951113 -24053543 - DM297_I LTR Gypsy -625 5542 5013 7 622 3341 8 0 0 chrUextra 4951111 4951481 -24053175 - DM297_I LTR Gypsy -1837 4330 3961 7 622 7923 17 0 2 chrUextra 4951581 4952479 -24052177 + R2_DM LINE R2 392 1287 -2320 7 622 4073 187 7 18 chrUextra 4952579 4953472 -24051184 + SAR_DM Satellite Satellite 208 1090 -382 7 622 671 236 165 52 chrUextra 4953578 4954112 -24050544 + Gypsy12_LTR LTR Gypsy 1451 1989 -291 7 622 23 0 0 0 chrUextra 4954287 4954310 -24050346 + AT_rich Low_complexity Low_complexity 1 23 0 7 622 500 149 211 0 chrUextra 4954361 4954475 -24050181 - DNAREP1_DM LINE Penelope -378 216 79 7 622 444 252 112 19 chrUextra 4954575 4954781 -24049875 + TAHRE LINE telomeric 9865 10089 -374 7 622 574 115 80 0 chrUextra 4954781 4954894 -24049762 + TART LINE telomeric 10370 10491 -3986 7 622 34 24 0 0 chrUextra 4954905 4954946 -24049710 + AT_rich Low_complexity Low_complexity 1 41 0 7 622 2429 120 14 35 chrUextra 4955573 4956471 -24048185 - DMSAT6 Satellite Satellite -1 879 1 7 622 2053 158 12 10 chrUextra 4956571 4957469 -24047187 - SAR_DM Satellite Satellite -700 899 1 7 622 3113 30 0 3 chrUextra 4957569 4957940 -24046716 - STALKER4_I LTR Gypsy -1186 5344 4975 7 622 2495 115 12 14 chrUextra 4957939 4958452 -24046204 + DMSAT6 Satellite Satellite 1 511 -97 7 622 248 239 56 22 chrUextra 4958762 4958852 -24045804 - DNAREP1_DM LINE Penelope -501 93 1 7 622 242 200 0 183 chrUextra 4959359 4959463 -24045193 + ACCORD2_LTR LTR Gypsy 1 85 -130 7 622 993 80 0 0 chrUextra 4959565 4959703 -24044953 - ARS406_DM Unknown Unknown -215 138 1 7 622 4155 173 12 12 chrUextra 4959597 4960462 -24044194 + SAR_DM Satellite Satellite 180 1044 -428 7 622 3715 172 10 14 chrUextra 4960563 4961348 -24043308 + SAR_DM Satellite Satellite 212 993 -479 7 622 551 104 62 0 chrUextra 4961365 4961461 -24043195 + SAR_DM Satellite Satellite 326 427 -1045 7 622 5139 19 0 13 chrUextra 4961561 4962186 -24042470 - Invader2_I LTR Gypsy -1108 3484 2868 7 622 2213 25 0 7 chrUextra 4962182 4962459 -24042197 - Invader2_I LTR Gypsy -1199 3393 3119 7 622 5507 41 3 14 chrUextra 4962762 4963457 -24041199 - R1_DM LINE R1 -4037 1319 633 7 622 1620 3 0 5 chrUextra 4963557 4963932 -24040724 + (GAGAA)n Simple_repeat Simple_repeat 1 372 0 7 622 4533 14 0 2 chrUextra 4963938 4964450 -24040206 - HETA LINE telomeric 0 6081 5571 7 622 512 120 98 0 chrUextra 4964919 4965011 -24039645 - NTS_DM Other Other -136 104 4 7 622 1348 37 0 0 chrUextra 4965122 4965284 -24039372 - NTS_DM Other Other -78 162 1 7 622 1047 26 26 26 chrUextra 4965284 4965439 -24039217 - NTS_DM Other Other 0 240 86 7 622 990 23 69 0 chrUextra 4965553 4965684 -24038972 - DOC LINE Jockey -4582 143 4 7 622 6681 9 33 0 chrUextra 4965695 4966450 -24038206 - DOC2_DM LINE Jockey -2176 2617 1838 7 622 4036 191 11 18 chrUextra 4966550 4967447 -24037209 + SAR_DM Satellite Satellite 267 1157 -315 7 622 438 138 0 65 chrUextra 4967547 4967671 -24036985 + CT-rich Low_complexity Low_complexity 4 119 0 7 622 859 203 32 0 chrUextra 4967674 4967861 -24036795 - Gypsy5_I LTR Gypsy -1953 4556 4364 7 622 3007 195 9 5 chrUextra 4967871 4968444 -24036212 - Gypsy5_I LTR Gypsy -2612 3897 3323 7 622 2620 106 14 12 chrUextra 4968544 4969441 -24035215 + DMSAT6 Satellite Satellite 1 899 -6 7 622 4495 4 0 0 chrUextra 4969541 4970024 -24034632 - TABOR_LTR LTR Gypsy -23 483 1 7 622 2832 13 0 0 chrUextra 4970121 4970438 -24034218 + MAX_I LTR Pao 4879 5195 -2719 7 622 3124 8 0 45 chrUextra 4970538 4970918 -24033738 - ACCORD2_I LTR Gypsy -6849 363 1 7 622 1920 9 0 18 chrUextra 4970918 4971137 -24033519 - ACCORD2_LTR LTR Gypsy 0 215 1 7 622 2702 19 19 0 chrUextra 4971137 4971435 -24033221 - R1_DM LINE R1 -2931 2425 2122 7 622 2640 10 0 0 chrUextra 4971535 4971829 -24032827 - R1_DM LINE R1 -1037 4319 4026 7 622 5189 32 5 0 chrUextra 4971831 4972432 -24032224 - R1_DM LINE R1 -1679 3677 3074 7 622 2657 0 0 7 chrUextra 4972532 4972834 -24031822 - ACCORD_LTR LTR Gypsy -258 300 1 7 622 5153 21 2 8 chrUextra 4972834 4973429 -24031227 - R1_DM LINE R1 -2231 3125 2535 7 622 6935 53 32 3 chrUextra 4973529 4974426 -24030230 - R1_DM LINE R1 -4232 1124 202 7 622 1472 284 57 30 chrUextra 4974526 4975421 -24029235 - STALKER4_I LTR Gypsy -2897 3633 2715 7 622 22 0 0 0 chrUextra 4975844 4975866 -24028790 + AT_rich Low_complexity Low_complexity 1 22 0 7 622 1497 95 41 35 chrUextra 4976523 4976840 -24027816 + DMSAT6 Satellite Satellite 106 424 -46 7 622 2970 145 2 14 chrUextra 4976866 4977357 -24027299 - FW_DM LINE Jockey -1567 3125 2641 7 622 340 138 17 0 chrUextra 4977359 4977417 -24027239 - FW_DM LINE Jockey -2498 2194 2136 7 622 7685 28 2 5 chrUextra 4977517 4978414 -24026242 + R1_DM LINE R1 4093 4987 -369 7 622 7293 47 27 5 chrUextra 4978514 4979411 -24025245 + IDEFIX_I LTR Gypsy 1066 1982 -3646 7 622 3470 198 26 28 chrUextra 4979511 4980407 -24024249 + SAR_DM Satellite Satellite 65 958 -514 7 77 1620 30 0 0 chrUextra 4980526 4980890 -24023766 + (TAGA)n Simple_repeat Simple_repeat 1 364 0 7 623 1191 94 0 0 chrUextra 4980893 4981170 -24023486 + (CTAG)n Simple_repeat Simple_repeat 1 277 0 7 623 1402 0 11 17 chrUextra 4981170 4981350 -24023306 + (CATAG)n Simple_repeat Simple_repeat 1 180 0 7 623 477 0 0 0 chrUextra 4981352 4981405 -24023251 + (CTAG)n Simple_repeat Simple_repeat 3 55 0 7 623 3875 49 19 10 chrUextra 4981505 4982018 -24022638 - R1_DM LINE R1 -4225 1131 614 7 623 2859 63 5 5 chrUextra 4982034 4982402 -24022254 - R1_DM LINE R1 -4947 409 42 7 623 4438 20 0 0 chrUextra 4982502 4983000 -24021656 + R1_DM LINE R1 4859 5356 0 7 623 1360 7 0 0 chrUextra 4982998 4983146 -24021510 + LSU-rRNA_Dme rRNA rRNA 2640 2787 -1113 7 623 2151 16 0 0 chrUextra 4983155 4983399 -24021257 + R2_DM LINE R2 374 617 -2990 7 623 3810 189 47 17 chrUextra 4983510 4984389 -24020267 + SAR_DM Satellite Satellite 326 1230 -242 7 623 2441 19 193 0 chrUextra 4984496 4984567 -24020089 + TART LINE telomeric 7652 7722 -6755 7 623 509 55 0 14 chrUextra 4984567 4984641 -24020015 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 7 623 2441 19 193 0 chrUextra 4984641 4984890 -24019766 + TART LINE telomeric 7723 8032 -6445 7 623 3973 60 2 0 chrUextra 4984890 4985391 -24019265 + TART LINE telomeric 5436 5937 -8540 7 623 2818 70 0 0 chrUextra 4985493 4985851 -24018805 + BS3_DM LINE Jockey 59 416 -1374 7 623 1601 69 10 0 chrUextra 4985847 4986050 -24018606 + BS3_DM LINE Jockey 526 730 -1060 7 623 729 34 0 0 chrUextra 4986062 4986151 -24018505 + BS3_DM LINE Jockey 1458 1546 -244 7 623 1699 84 4 4 chrUextra 4986150 4986390 -24018266 + DM297_I LTR Gypsy 2179 2418 -3749 7 623 2191 50 7 3 chrUextra 4986490 4986764 -24017892 + Gypsy6A_LTR LTR Gypsy 143 420 0 7 623 3700 52 27 114 chrUextra 4986764 4987387 -24017269 + Gypsy6_I LTR Gypsy 1 569 -6443 7 623 446 314 27 37 chrUextra 4987487 4987779 -24016877 + MICROPIA_I LTR Gypsy 424 710 -3389 7 623 502 317 13 9 chrUextra 4987988 4988214 -24016442 + MICROPIA_I LTR Gypsy 907 1133 -3343 7 623 663 275 6 6 chrUextra 4988211 4988383 -24016273 + Invader6_I LTR Gypsy 1708 1879 -2220 7 623 4190 137 50 39 chrUextra 4988484 4989378 -24015278 - HETA LINE telomeric -522 5559 4656 7 623 3246 129 8 13 chrUextra 4989479 4990004 -24014652 + TAHRE LINE telomeric 9934 10455 -8 7 623 2156 147 14 8 chrUextra 4990004 4990375 -24014281 + TART_B1 LINE telomeric 879 1251 -9403 7 623 3959 58 18 170 chrUextra 4990487 4991371 -24013285 - BATUMI_I LTR Pao -7010 953 204 7 623 1399 107 22 41 chrUextra 4991473 4991788 -24012868 - DM412 LTR Gypsy -316 255 1 7 623 4011 57 17 17 chrUextra 4991829 4992367 -24012289 - DM412 LTR Gypsy -357 6540 6003 7 623 1544 0 0 0 chrUextra 4992470 4992636 -24012020 + NOMAD_I LTR Gypsy 6407 6572 0 7 623 4800 0 0 0 chrUextra 4992636 4993154 -24011502 + NOMAD_LTR LTR Gypsy 1 518 0 7 623 1930 0 0 0 chrUextra 4993154 4993363 -24011293 - ROO_I LTR Pao -3543 4713 4505 7 623 5329 15 63 0 chrUextra 4993463 4994309 -24010347 - MICROPIA_I LTR Gypsy -3577 899 1 7 623 406 20 0 20 chrUextra 4994309 4994359 -24010297 - MICROPIA_LTR LTR Gypsy 0 476 428 7 623 1795 317 42 11 chrUextra 4994461 4995347 -24009309 - MICROPIA_I LTR Gypsy -1837 2639 1761 7 623 3997 185 16 19 chrUextra 4995459 4996351 -24008305 - SAR_DM Satellite Satellite -242 1230 342 7 623 3300 17 0 0 chrUextra 4996451 4996812 -24007844 - TABOR_LTR LTR Gypsy -145 361 1 7 623 3671 27 1 21 chrUextra 4996810 4997347 -24007309 - TABOR_I LTR Gypsy 0 6336 5690 7 623 3191 120 29 17 chrUextra 4997450 4997974 -24006682 - DOC LINE Jockey -49 4676 4147 7 623 46 0 0 0 chrUextra 4998008 4998054 -24006602 + AT_rich Low_complexity Low_complexity 1 46 0 7 623 1786 45 5 0 chrUextra 4998072 4998292 -24006364 + S2_DM DNA Tc1 748 968 -767 7 623 348 60 60 0 chrUextra 4998293 4998343 -24006313 - IDEFIX_LTR LTR Gypsy -253 341 289 7 623 2073 0 0 0 chrUextra 4998443 4998679 -24005977 + G_DM LINE Jockey 4108 4343 -3 7 623 254 186 0 0 chrUextra 4998759 4998802 -24005854 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 7 623 240 216 0 19 chrUextra 4998851 4998903 -24005753 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 623 3414 0 0 0 chrUextra 4998964 4999339 -24005317 + G_DM LINE Jockey 1 375 -3971 7 623 5101 14 0 0 chrUextra 4999439 5000000 -24004656 + Gypsy2_I LTR Gypsy 3073 3633 -2502 7 623 2880 24 0 0 chrUextra 5000000 5000335 -24004321 + Gypsy2_I LTR Gypsy 3634 3968 -2167 7 623 3769 195 12 8 chrUextra 5000454 5001311 -24003345 - SAR_DM Satellite Satellite -418 1054 195 7 623 695 124 0 0 chrUextra 5001218 5001331 -24003325 + ARS406_DM Unknown Unknown 1 113 -240 7 623 279 125 236 0 chrUextra 5002479 5002623 -24002033 + (TTTAG)n Simple_repeat Simple_repeat 1 178 0 7 623 4488 12 0 11 chrUextra 5002629 5003323 -24001333 + DM412 LTR Gypsy 1 519 -6378 7 623 7584 35 0 0 chrUextra 5003423 5004319 -24000337 - S_DM DNA Tc1 -557 1179 284 7 623 3651 18 9 0 chrUextra 5004419 5004873 -23999783 - PROTOP DNA P -251 4229 3772 7 623 3767 18 5 0 chrUextra 5004870 5005311 -23999345 - PROTOP DNA P -3182 1298 856 7 623 902 96 0 0 chrUextra 5005415 5005551 -23999105 - ARS406_DM Unknown Unknown -217 136 1 7 623 3856 190 9 9 chrUextra 5005432 5006310 -23998346 + SAR_DM Satellite Satellite 167 1044 -428 7 623 23 0 0 0 chrUextra 5006539 5006562 -23998094 + AT_rich Low_complexity Low_complexity 1 23 0 7 623 186 43 0 0 chrUextra 5006846 5006869 -23997787 + (TAAAAA)n Simple_repeat Simple_repeat 1 23 0 7 623 530 309 84 37 chrUextra 5006902 5007305 -23997351 + TV1I LTR Gypsy 417 838 -5125 7 623 768 60 0 0 chrUextra 5007407 5007507 -23997149 + ARS406_DM Unknown Unknown 88 187 -166 7 623 3804 182 16 19 chrUextra 5007420 5008303 -23996353 - SAR_DM Satellite Satellite -217 1255 376 7 623 3952 191 15 18 chrUextra 5008407 5009299 -23995357 + SAR_DM Satellite Satellite 1 889 -203 7 623 2481 166 10 14 chrUextra 5009399 5010295 -23994361 - SAR_DM Satellite Satellite -458 892 1 7 623 1315 190 93 20 chrUextra 5010399 5010753 -23993903 + Gypsy12_LTR LTR Gypsy 1154 1533 -803 7 623 3620 114 37 0 chrUextra 5010755 5011291 -23993365 + Gypsy12_I LTR Gypsy 1779 2334 -3212 7 623 649 26 13 0 chrUextra 5011391 5011467 -23993189 - Gypsy4_I LTR Gypsy -3922 2366 2290 7 623 2956 9 63 0 chrUextra 5011467 5011615 -23993041 - Stalker3_LTR LTR Gypsy 0 372 225 7 623 207 0 0 0 chrUextra 5011615 5011638 -23993018 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 623 2956 9 63 0 chrUextra 5011638 5011839 -23992817 - Stalker3_LTR LTR Gypsy -148 224 2 7 623 3874 7 2 7 chrUextra 5011839 5012287 -23992369 - Gypsy4_I LTR Gypsy -3995 2293 1848 7 623 441 92 195 0 chrUextra 5012390 5012477 -23992179 - DMCR1A LINE CR1 -243 4227 4124 7 623 622 79 11 11 chrUextra 5012466 5012556 -23992100 - DMCR1A LINE CR1 -761 3709 3620 7 623 864 291 21 13 chrUextra 5012555 5012941 -23991715 - HMSBEAGLE_I LTR Gypsy -3032 3497 3109 7 623 7264 19 94 0 chrUextra 5014378 5015273 -23989383 + FW_DM LINE Jockey 3240 4218 -474 7 623 7556 9 41 6 chrUextra 5015373 5016260 -23988396 + MICROPIA_I LTR Gypsy 2958 3875 -601 7 623 6764 25 28 0 chrUextra 5016381 5017179 -23987477 + G2_DM LINE Jockey 638 1457 -1645 7 623 639 47 0 0 chrUextra 5017177 5017263 -23987393 - G2_DM LINE Jockey -75 3027 2942 7 623 262 119 24 0 chrUextra 5017376 5017418 -23987238 - NTS_DM Other Other -191 49 7 7 623 1091 134 20 5 chrUextra 5017455 5017657 -23986999 - NTS_DM Other Other -35 205 1 7 623 225 183 45 68 chrUextra 5017657 5017745 -23986911 - NTS_DM Other Other 0 240 155 7 623 1179 124 30 22 chrUextra 5017796 5018027 -23986629 - NTS_DM Other Other 0 240 8 7 623 285 85 43 0 chrUextra 5018123 5018170 -23986486 - NTS_DM Other Other -191 49 1 7 623 272 88 0 17 chrUextra 5018200 5018258 -23986398 - NTS_DM Other Other -67 173 117 7 623 7958 0 1 0 chrUextra 5018358 5019253 -23985403 - ACCORD_I LTR Gypsy -1375 4913 4018 7 623 1438 150 37 138 chrUextra 5019353 5019862 -23984794 + TART LINE telomeric 7043 7421 -3042 7 623 1668 177 43 18 chrUextra 5019856 5020248 -23984408 + TART LINE telomeric 9178 9579 -4898 7 623 277 348 0 0 chrUextra 5020582 5020717 -23983939 - Invader3_I LTR Gypsy -695 4193 4059 7 623 242 322 0 0 chrUextra 5021109 5021199 -23983457 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 7 623 3373 20 2 0 chrUextra 5021343 5021744 -23982912 - STALKER4_I LTR Gypsy -3995 2535 2134 7 623 4231 14 0 6 chrUextra 5021740 5022238 -23982418 - STALKER4_I LTR Gypsy -1546 4984 4490 7 623 4414 129 72 39 chrUextra 5022338 5023232 -23981424 + MICROPIA_I LTR Gypsy 1650 2572 -1904 7 623 2647 7 0 3 chrUextra 5023333 5023642 -23981014 - DM297_I LTR Gypsy -864 5303 4996 7 623 5043 17 0 0 chrUextra 5023628 5024228 -23980428 - DM297_I LTR Gypsy -2272 3895 3296 7 623 2162 0 12 19 chrUextra 5024328 5024584 -23980072 + DM1731_I LTR Copia 3723 3976 0 7 623 2800 39 0 0 chrUextra 5024584 5024920 -23979736 + DM1731_LTR LTR Copia 1 336 0 7 623 40 37 0 0 chrUextra 5024983 5025037 -23979619 + AT_rich Low_complexity Low_complexity 1 54 0 7 623 1184 38 0 37 chrUextra 5025061 5025223 -23979433 + BATUMI_LTR LTR Pao 32 187 -85 7 623 1164 31 210 0 chrUextra 5025323 5025485 -23979171 + Gypsy12_I LTR Gypsy 4166 4361 -1185 7 623 6292 16 5 15 chrUextra 5025482 5026218 -23978438 + Gypsy12_I LTR Gypsy 4711 5439 -107 7 623 1964 221 44 58 chrUextra 5026342 5026909 -23977747 - Gypsy12_LTR LTR Gypsy -1777 559 1 7 623 2167 91 0 23 chrUextra 5026909 5027213 -23977443 - Gypsy12_I LTR Gypsy 0 5546 5250 7 623 21 0 0 0 chrUextra 5028175 5028196 -23976460 + AT_rich Low_complexity Low_complexity 1 21 0 7 623 1609 9 24 0 chrUextra 5028314 5028527 -23976129 - TLD2 Unknown Unknown 0 218 1 7 623 455 316 14 10 chrUextra 5028362 5028570 -23976086 - Gypsy4_I LTR Gypsy -3504 2784 2576 7 623 7492 11 3 3 chrUextra 5029303 5030198 -23974458 - DM176_I LTR Gypsy -481 5939 5045 7 623 674 276 90 51 chrUextra 5030363 5030718 -23973938 - TV1I LTR Gypsy -5118 942 574 7 623 3160 94 0 40 chrUextra 5030715 5031193 -23973463 - Gypsy12_I LTR Gypsy -4442 1104 646 7 623 1630 209 120 33 chrUextra 5031322 5031872 -23972784 - Gypsy12_LTR LTR Gypsy -575 1761 1164 7 623 469 251 21 84 chrUextra 5031890 5032129 -23972527 - Gypsy12_LTR LTR Gypsy -1258 1078 855 7 623 2415 0 0 0 chrUextra 5032288 5032552 -23972104 + Invader2_LTR LTR Gypsy 3 266 0 7 623 409 272 82 50 chrUextra 5032625 5032966 -23971690 + I_DM LINE I 3622 3973 -2258 7 623 34 24 0 0 chrUextra 5033435 5033476 -23971180 + AT_rich Low_complexity Low_complexity 1 41 0 7 623 1815 108 16 60 chrUextra 5033681 5033997 -23970659 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 623 27 49 0 0 chrUextra 5034060 5034101 -23970555 + AT_rich Low_complexity Low_complexity 1 41 0 7 623 2261 179 17 8 chrUextra 5034278 5035173 -23969483 - SAR_DM Satellite Satellite -693 902 1 7 623 421 45 29 43 chrUextra 5035276 5035346 -23969310 - Gypsy12_I LTR Gypsy -5477 69 1 7 623 3465 177 44 43 chrUextra 5035346 5036168 -23968488 - Gypsy12_LTR LTR Gypsy 0 2336 1514 7 623 394 121 0 0 chrUextra 5036276 5036334 -23968322 + ARS406_DM Unknown Unknown 132 189 -164 7 623 3127 195 88 14 chrUextra 5036284 5037162 -23967494 - SAR_DM Satellite Satellite -255 1217 275 7 623 6446 68 20 7 chrUextra 5037262 5038156 -23966500 + IDEFIX_I LTR Gypsy 2659 3564 -2064 7 623 3910 177 19 22 chrUextra 5038260 5039149 -23965507 - SAR_DM Satellite Satellite -255 1217 332 7 623 537 244 122 22 chrUextra 5039252 5039432 -23965224 - TAHRE LINE telomeric -459 10004 9807 7 623 673 146 9 0 chrUextra 5039439 5039549 -23965107 - Gypsy12A_LTR LTR Gypsy -18 2262 2152 7 623 2267 108 183 0 chrUextra 5039546 5040115 -23964541 - Gypsy12_I LTR Gypsy -1044 4502 3830 7 623 4149 16 24 0 chrUextra 5040244 5040748 -23963908 - Invader2_I LTR Gypsy -3881 711 196 7 623 3185 38 0 2 chrUextra 5040740 5041138 -23963518 - TRANSIB2 DNA Transib -2178 666 270 7 623 2444 72 12 55 chrUextra 5041238 5042132 -23962524 + DMSAT6 Satellite Satellite 1 856 -69 7 623 454 113 0 0 chrUextra 5043229 5043300 -23961356 - ARS406_DM Unknown Unknown -282 71 1 7 623 3438 174 16 81 chrUextra 5043238 5044119 -23960537 + SAR_DM Satellite Satellite 224 1047 -425 7 623 2465 116 15 40 chrUextra 5044220 5045114 -23959542 - DMSAT6 Satellite Satellite -94 871 1 7 623 22 35 0 0 chrUextra 5045402 5045431 -23959225 + AT_rich Low_complexity Low_complexity 1 29 0 7 623 51 31 0 0 chrUextra 5045607 5045672 -23958984 + AT_rich Low_complexity Low_complexity 1 65 0 7 623 534 66 0 0 chrUextra 5046208 5046284 -23958372 + S_DM DNA Tc1 1661 1736 0 7 623 1058 23 15 8 chrUextra 5046284 5046412 -23958244 - CIRCE LINE Composite -1861 4495 4367 7 623 3744 14 2 0 chrUextra 5046412 5046834 -23957822 - Invader1_LTR LTR Gypsy 0 423 1 7 623 2172 11 8 0 chrUextra 5046834 5047102 -23957554 - Invader1_I LTR Gypsy 0 3186 2917 7 623 3931 177 17 11 chrUextra 5047204 5048084 -23956572 + SAR_DM Satellite Satellite 192 1076 -396 7 623 7925 2 11 0 chrUextra 5048196 5049090 -23955566 - DMRT1B LINE R1 -1838 3345 2442 7 623 533 70 0 0 chrUextra 5049190 5049261 -23955395 + ARS406_DM Unknown Unknown 119 189 -164 7 623 3633 194 20 19 chrUextra 5049198 5050082 -23954574 - SAR_DM Satellite Satellite -242 1230 346 7 623 976 50 22 6 chrUextra 5050184 5050325 -23954331 - FW_DM LINE Jockey -3336 1404 1228 7 623 3165 8 3 0 chrUextra 5050454 5050806 -23953850 - Gypsy2_LTR LTR Gypsy 0 353 1 7 623 1623 5 0 177 chrUextra 5050807 5051078 -23953578 - Gypsy2_I LTR Gypsy -9 6126 5904 7 623 22 35 0 0 chrUextra 5051331 5051360 -23953296 + AT_rich Low_complexity Low_complexity 1 29 0 7 623 224 185 31 0 chrUextra 5051647 5051712 -23952944 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 623 5144 93 18 4 chrUextra 5052176 5052942 -23951714 - S_DM DNA Tc1 -959 777 1 7 623 1022 24 0 8 chrUextra 5052942 5053066 -23951590 - CIRCE LINE Composite -1861 4495 4373 7 623 2868 57 60 0 chrUextra 5053166 5053551 -23951105 + PROTOP_A DNA P 698 1105 0 7 623 21 57 0 0 chrUextra 5054005 5054040 -23950616 + AT_rich Low_complexity Low_complexity 1 35 0 7 623 7381 31 25 0 chrUextra 5054160 5055054 -23949602 - R1_DM LINE R1 -1845 3511 2596 7 623 7217 44 11 1 chrUextra 5055154 5056048 -23948608 - R1_DM LINE R1 -3993 1363 461 7 623 262 150 0 0 chrUextra 5056158 5056198 -23948458 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 262 150 0 0 chrUextra 5056249 5056289 -23948367 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 246 150 0 0 chrUextra 5056341 5056381 -23948275 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 255 125 0 0 chrUextra 5056424 5056464 -23948192 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 1321 17 0 22 chrUextra 5056530 5056711 -23947945 + NTS_DM Other Other 25 201 -39 7 623 863 9 0 27 chrUextra 5056763 5056875 -23947781 + NTS_DM Other Other 25 133 -107 7 623 1252 18 0 6 chrUextra 5056875 5057040 -23947616 + NTS_DM Other Other 38 201 -39 7 623 972 38 0 0 chrUextra 5057142 5057273 -23947383 + QUASIMODO_I LTR Gypsy 2772 2902 -3158 7 623 5499 52 1 0 chrUextra 5057267 5058036 -23946620 + QUASIMODO_I LTR Gypsy 3168 3937 -2123 7 623 3801 26 0 0 chrUextra 5058136 5058590 -23946066 + MAX_I LTR Pao 6247 6700 -1214 7 623 704 266 12 46 chrUextra 5058616 5058936 -23945720 - Gypsy12_LTR LTR Gypsy -1564 772 502 7 623 274 232 0 0 chrUextra 5058948 5059004 -23945652 - Gypsy12_LTR LTR Gypsy -1816 464 409 7 623 661 107 0 136 chrUextra 5059173 5059335 -23945321 + HMSBEAGLE_I LTR Gypsy 6229 6368 -161 7 623 295 109 0 0 chrUextra 5059598 5059644 -23945012 + HMSBEAGLE_I LTR Gypsy 6360 6405 -124 7 623 950 139 0 12 chrUextra 5059840 5060007 -23944649 + DMLTR5 LTR Gypsy 102 266 0 7 623 1187 26 26 0 chrUextra 5060124 5060278 -23944378 - DM176_LTR LTR Gypsy -99 408 251 7 623 2198 11 0 78 chrUextra 5060279 5060586 -23944070 - DM176_LTR LTR Gypsy -224 283 1 7 623 1095 93 6 0 chrUextra 5060838 5060999 -23943657 + MAX_I LTR Pao 557 718 -7196 7 623 2149 202 43 26 chrUextra 5061296 5062007 -23942649 - SAR_DM Satellite Satellite -627 723 1 7 623 2552 16 0 6 chrUextra 5062111 5062434 -23942222 + G6_DM LINE Jockey 1722 2042 0 7 623 4651 11 0 0 chrUextra 5062452 5063004 -23941652 - S_DM DNA Tc1 -217 1519 968 7 623 2496 111 40 10 chrUextra 5063116 5063997 -23940659 - DMSAT6 Satellite Satellite 0 907 1 7 623 1620 0 0 0 chrUextra 5064300 5064577 -23940079 + (CAAGA)n Simple_repeat Simple_repeat 1 277 0 7 623 869 16 0 59 chrUextra 5064595 5064730 -23939926 + (CAAGA)n Simple_repeat Simple_repeat 5 131 0 7 623 3446 188 16 24 chrUextra 5065090 5065982 -23938674 - SAR_DM Satellite Satellite -316 1156 272 7 623 6960 26 41 0 chrUextra 5066083 5066976 -23937680 + NINJA_I LTR Pao 1159 2088 -3923 7 623 3224 37 10 0 chrUextra 5067076 5067481 -23937175 + DMRT1B LINE R1 4775 5183 0 7 623 505 30 105 0 chrUextra 5067499 5067632 -23937024 + (CAGAC)n Simple_repeat Simple_repeat 1 147 0 7 623 2623 31 3 0 chrUextra 5067644 5067969 -23936687 + DMRT1A LINE R1 1 326 -4857 7 623 1781 5 0 0 chrUextra 5068069 5068281 -23936375 - DMRT1B LINE R1 -721 4462 4251 7 623 4716 60 48 9 chrUextra 5068277 5068962 -23935694 + R1_DM LINE R1 176 887 -4469 7 623 3798 5 194 5 chrUextra 5069062 5069651 -23935005 + MDG1_I LTR Gypsy 5909 6799 -98 7 623 423 100 0 0 chrUextra 5069655 5069725 -23934931 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 623 1936 17 0 0 chrUextra 5069725 5069955 -23934701 + MDG1_LTR LTR Gypsy 87 316 -126 7 623 985 344 0 0 chrUextra 5070179 5070665 -23933991 - Invader6_I LTR Gypsy -1888 2211 1726 7 623 548 125 17 26 chrUextra 5071060 5071175 -23933481 + RSP Satellite Satellite 1 114 -4 7 623 1020 65 9 19 chrUextra 5071219 5071835 -23932821 + RSP Satellite Satellite 1 610 0 7 623 861 266 47 28 chrUextra 5072043 5072602 -23932054 + TART LINE telomeric 12798 13306 -1171 7 623 1645 119 7 4 chrUextra 5072664 5072933 -23931723 + TART LINE telomeric 6734 7003 -7474 7 623 3269 197 18 26 chrUextra 5073034 5073925 -23930731 - SAR_DM Satellite Satellite -220 1252 369 7 623 41 0 0 0 chrUextra 5074027 5074068 -23930588 + AT_rich Low_complexity Low_complexity 1 41 0 7 623 585 195 76 19 chrUextra 5074259 5074416 -23930240 - ACCORD2_LTR LTR Gypsy -5 210 45 7 623 2134 85 78 25 chrUextra 5074477 5074702 -23929954 - ACCORD2_I LTR Gypsy -8 7204 6979 7 623 185 0 40 0 chrUextra 5074702 5074727 -23929929 + (TTA)n Simple_repeat Simple_repeat 1 26 0 7 623 2134 85 78 25 chrUextra 5074727 5074862 -23929794 - ACCORD2_I LTR Gypsy -234 6978 6826 7 623 389 69 0 0 chrUextra 5074862 5074920 -23929736 - ACCORD2_I LTR Gypsy -341 6871 6814 7 623 7376 20 1 3 chrUextra 5075020 5075913 -23928743 - R2_DM LINE R2 -651 2956 2066 7 623 3796 9 0 2 chrUextra 5076013 5076472 -23928184 + MICROPIA_I LTR Gypsy 4019 4476 0 7 623 898 9 0 0 chrUextra 5076472 5076577 -23928079 + MICROPIA_LTR LTR Gypsy 1 105 -371 7 623 1376 12 0 23 chrUextra 5076573 5076744 -23927912 - ACCORD2_LTR LTR Gypsy -48 167 1 7 623 1378 34 34 0 chrUextra 5076744 5076906 -23927750 - R1_DM LINE R1 -2931 2425 2258 7 623 2310 35 10 10 chrUextra 5077010 5077323 -23927333 + BATUMI_I LTR Pao 6439 6751 -1212 7 623 4471 30 2 10 chrUextra 5077316 5077896 -23926760 - BATUMI_I LTR Pao -4489 3474 2900 7 623 3366 25 4 43 chrUextra 5078288 5078753 -23925903 + CIRCE LINE Composite 4981 5427 -929 7 623 336 0 0 0 chrUextra 5078852 5078892 -23925764 + CIRCE LINE Composite 5893 5932 -424 7 623 3286 183 67 22 chrUextra 5079053 5079885 -23924771 + STALKER4_I LTR Gypsy 885 1754 -4776 7 623 3760 189 5 8 chrUextra 5079985 5080870 -23923786 + SAR_DM Satellite Satellite 195 1076 -396 7 623 3517 117 0 0 chrUextra 5080978 5081497 -23923159 - Gypsy12_I LTR Gypsy -1446 4100 3582 7 623 3026 24 0 0 chrUextra 5081497 5081866 -23922790 - PROTOP_A DNA P 0 1105 737 7 623 3428 194 12 17 chrUextra 5081982 5082843 -23921813 - SAR_DM Satellite Satellite -291 1181 326 7 623 3109 200 11 16 chrUextra 5082964 5083857 -23920799 + SAR_DM Satellite Satellite 1 887 -216 7 623 2804 177 72 14 chrUextra 5083957 5084661 -23919995 - Gypsy12_LTR LTR Gypsy -136 2200 1456 7 623 398 202 145 16 chrUextra 5084664 5084850 -23919806 - Gypsy12_LTR LTR Gypsy -661 1675 1466 7 623 258 116 43 14 chrUextra 5085444 5085514 -23919142 + A-rich Low_complexity Low_complexity 1 72 0 7 623 1703 32 0 43 chrUextra 5085943 5086200 -23918456 + BATUMI_I LTR Pao 677 922 -7041 7 623 3367 41 2 13 chrUextra 5086200 5086648 -23918008 + BATUMI_I LTR Pao 1630 2072 -5891 7 623 1229 38 26 26 chrUextra 5086646 5086836 -23917820 + BATUMI_I LTR Pao 1914 2103 -5860 7 623 3254 186 13 17 chrUextra 5086936 5087824 -23916832 + SAR_DM Satellite Satellite 1 884 -208 7 623 2298 32 0 0 chrUextra 5087929 5088214 -23916442 - DM1731_LTR LTR Copia -45 291 7 7 623 7047 15 71 0 chrUextra 5088922 5089814 -23914842 - DOC2_DM LINE Jockey -2141 2652 1698 7 623 4007 194 12 7 chrUextra 5089956 5090807 -23913849 + ROVER-I_DM LTR Gypsy 3537 4391 -2193 7 623 1637 152 30 16 chrUextra 5090907 5091275 -23913381 - SAR_DM Satellite Satellite -557 915 543 7 623 2140 184 14 18 chrUextra 5091286 5091799 -23912857 - SAR_DM Satellite Satellite -396 1076 566 7 623 5402 2 0 2 chrUextra 5091899 5092520 -23912136 - R2_DM LINE R2 -2987 620 1 7 623 2186 0 4 0 chrUextra 5092538 5092791 -23911865 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2328 7 623 586 132 0 0 chrUextra 5092891 5092997 -23911659 - ARS406_DM Unknown Unknown -247 106 1 7 623 3665 185 9 10 chrUextra 5092904 5093783 -23910873 + SAR_DM Satellite Satellite 195 1072 -400 7 623 4342 4 0 2 chrUextra 5093894 5094399 -23910257 - DOC LINE Jockey -4190 535 32 7 623 2460 32 109 20 chrUextra 5094427 5094775 -23909881 + ROO_I LTR Pao 4219 4597 -3659 7 623 1031 147 34 21 chrUextra 5094949 5095186 -23909470 + NTS_DM Other Other 1 240 0 7 623 977 147 38 21 chrUextra 5095325 5095561 -23909095 + NTS_DM Other Other 1 240 0 7 623 360 164 15 0 chrUextra 5095700 5095767 -23908889 + NTS_DM Other Other 1 68 -172 7 623 1749 131 47 44 chrUextra 5096398 5096759 -23907897 - ZAM_LTR LTR Gypsy 0 472 111 7 623 1396 319 52 33 chrUextra 5096863 5097749 -23906907 - Gypsy2_I LTR Gypsy -2127 4008 3106 7 623 3276 236 29 28 chrUextra 5097851 5099719 -23904937 + SAR_DM Satellite Satellite 1 1868 -208 7 623 486 117 0 0 chrUextra 5099658 5099735 -23904921 - ARS406_DM Unknown Unknown -166 187 111 7 623 7151 26 0 1 chrUextra 5099835 5100727 -23903929 + NINJA_I LTR Pao 1882 2772 -3239 7 623 6838 21 42 2 chrUextra 5100827 5101719 -23902937 - PROTOP_A DNA P -97 1008 82 7 623 2317 7 0 0 chrUextra 5101819 5102109 -23902547 + TRANSPAC_I LTR Gypsy 4301 4590 0 7 623 2879 3 0 0 chrUextra 5102108 5102438 -23902218 + TRANSPAC_LTR LTR Gypsy 1 330 0 7 623 2321 0 4 4 chrUextra 5102438 5102711 -23901945 - SSU-rRNA_Dme rRNA rRNA -555 1440 1168 7 623 1447 0 17 6 chrUextra 5103111 5103285 -23901371 + (TCTTG)n Simple_repeat Simple_repeat 3 178 0 7 623 21 57 0 0 chrUextra 5104260 5104295 -23900361 + AT_rich Low_complexity Low_complexity 1 35 0 7 623 444 326 136 14 chrUextra 5104328 5104695 -23899961 + BS LINE Jockey 116 527 -4599 7 623 3763 0 0 0 chrUextra 5104795 5105223 -23899433 + TABOR_LTR LTR Gypsy 79 506 0 7 623 1942 189 9 9 chrUextra 5105222 5105685 -23898971 + SAR_DM Satellite Satellite 457 919 -553 7 623 4389 32 13 1 chrUextra 5105787 5106679 -23897977 - DMRT1A LINE R1 -4094 1089 41 7 623 7658 0 10 0 chrUextra 5107771 5108663 -23895993 - DMRT1B LINE R1 -1596 3587 2687 7 623 631 91 0 10 chrUextra 5108763 5108863 -23895793 + SAR_DM Satellite Satellite 400 498 -974 7 623 3013 194 12 16 chrUextra 5108883 5109655 -23895001 + SAR_DM Satellite Satellite 1 768 -242 7 623 1620 0 0 0 chrUextra 5109755 5110026 -23894630 + (GAGAA)n Simple_repeat Simple_repeat 1 271 0 7 623 7078 29 1 2 chrUextra 5110747 5111639 -23893017 + NINJA_I LTR Pao 3849 4739 -1272 7 77 3974 16 0 2 chrUextra 5111739 5112192 -23892464 + HETA LINE telomeric 5630 6081 0 7 624 1786 149 13 36 chrUextra 5112187 5112631 -23892025 + HETA LINE telomeric 1 616 -5465 7 624 731 141 0 0 chrUextra 5112731 5112852 -23891804 - ARS406_DM Unknown Unknown -232 121 1 7 624 3755 195 8 17 chrUextra 5112756 5113600 -23891056 + SAR_DM Satellite Satellite 192 1028 -444 7 624 1318 225 198 56 chrUextra 5113723 5114548 -23890108 - Gypsy12_LTR LTR Gypsy -486 1794 853 7 624 7326 38 28 1 chrUextra 5114715 5115607 -23889049 - R1_DM LINE R1 -3628 1728 813 7 624 3693 176 19 25 chrUextra 5115707 5116599 -23888057 + SAR_DM Satellite Satellite 1 885 -216 7 624 1620 9 0 0 chrUextra 5117158 5117591 -23887065 + (TCTTG)n Simple_repeat Simple_repeat 1 433 0 7 624 5103 40 2 11 chrUextra 5117737 5118350 -23886306 - G5A_DM LINE Jockey -3 2838 2232 7 624 322 231 119 21 chrUextra 5118358 5118499 -23886157 + Gypsy7_I LTR Gypsy 1704 1805 -3179 7 624 232 259 67 11 chrUextra 5118493 5118583 -23886073 + Gypsy7_I LTR Gypsy 2155 2249 -3611 7 624 2087 176 21 24 chrUextra 5118692 5119575 -23885081 - SAR_DM Satellite Satellite -535 881 1 7 624 7583 7 48 0 chrUextra 5119675 5119807 -23884849 + STALKER4_I LTR Gypsy 1376 1507 -5023 7 624 189 0 0 0 chrUextra 5119807 5119828 -23884828 + (TATAA)n Simple_repeat Simple_repeat 2 22 0 7 624 7583 7 48 0 chrUextra 5119828 5120566 -23884090 + STALKER4_I LTR Gypsy 1508 2286 -4244 7 624 530 285 19 50 chrUextra 5120693 5120952 -23883704 + FROGGER_I LTR Copia 1827 2077 0 7 624 220 141 46 15 chrUextra 5121210 5121275 -23883381 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 624 3799 179 15 20 chrUextra 5121658 5122548 -23882108 - SAR_DM Satellite Satellite -498 885 1 7 624 3434 194 49 22 chrUextra 5122648 5123539 -23881117 + SAR_DM Satellite Satellite 72 986 -486 7 624 4472 43 1 1 chrUextra 5123639 5124530 -23880126 + R1_DM LINE R1 1061 1991 -3365 7 624 7664 22 10 1 chrUextra 5124630 5125521 -23879135 - R1_DM LINE R1 -2878 2478 1580 7 624 3395 103 68 6 chrUextra 5125628 5126143 -23878513 + TAHRE LINE telomeric 1140 1686 -8777 7 624 608 70 68 23 chrUextra 5126166 5126254 -23878402 + ACCORD2_LTR LTR Gypsy 124 215 0 7 624 1692 122 8 4 chrUextra 5126254 5126498 -23878158 + HETA LINE telomeric 2433 2677 -3404 7 624 5581 18 0 11 chrUextra 5126612 5127500 -23877156 - CIRCE LINE Composite -1868 4488 3564 7 624 6658 52 7 37 chrUextra 5127603 5128494 -23876162 + HETA LINE telomeric 3798 4661 -1420 7 624 347 322 25 23 chrUextra 5128656 5128878 -23875778 - BLASTOPIA_I LTR Gypsy -1061 3925 3541 7 624 318 289 18 43 chrUextra 5129163 5129326 -23875330 - BLASTOPIA_I LTR Gypsy -1565 3421 3263 7 624 2809 3 3 0 chrUextra 5129585 5129904 -23874752 + FW_DM LINE Jockey 4373 4692 0 7 624 2095 138 54 36 chrUextra 5129896 5130476 -23874180 - STALKER4_I LTR Gypsy -5525 1005 418 7 624 3999 186 8 22 chrUextra 5130582 5131460 -23873196 + SAR_DM Satellite Satellite 246 1111 -361 7 624 263 170 19 0 chrUextra 5131414 5131467 -23873189 - XDMR Unknown Unknown 0 361 308 7 624 7860 19 3 0 chrUextra 5131567 5132458 -23872198 - FW_DM LINE Jockey -662 4030 3137 7 624 1776 93 13 17 chrUextra 5132558 5132876 -23871780 - BATUMI_I LTR Pao -180 7783 7303 7 624 4282 48 7 9 chrUextra 5132899 5133449 -23871207 + BATUMI_I LTR Pao 6427 6975 -988 7 624 6535 55 89 5 chrUextra 5133549 5134440 -23870216 - TRANSIB2 DNA Transib -1543 1301 336 7 624 7640 16 26 0 chrUextra 5134540 5135431 -23869225 - ROO_I LTR Pao -3837 4419 3506 7 624 7114 24 75 22 chrUextra 5135531 5136422 -23868234 - Gypsy12_I LTR Gypsy -4346 1200 263 7 624 1040 193 20 29 chrUextra 5136522 5136767 -23867889 + Gypsy5_LTR LTR Gypsy 47 289 -141 7 624 5357 7 0 0 chrUextra 5137513 5138127 -23866529 - Copia_I LTR Copia -1823 2770 2157 7 624 2635 3 7 0 chrUextra 5138109 5138404 -23866252 - Copia_I LTR Copia -2930 1663 1367 7 624 1411 39 6 0 chrUextra 5138505 5138683 -23865973 - G5_DM LINE Jockey -76 4780 4602 7 624 3259 48 5 0 chrUextra 5138680 5139074 -23865582 - G5_DM LINE Jockey -489 4367 3972 7 624 21 0 0 0 chrUextra 5139105 5139126 -23865530 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 4513 45 93 0 chrUextra 5139520 5140119 -23864537 - BS3_DM LINE Jockey -366 1424 770 7 624 720 197 13 72 chrUextra 5140149 5140384 -23864272 - Gypsy12A_LTR LTR Gypsy -1169 1111 891 7 624 2557 90 40 17 chrUextra 5141477 5142368 -23862288 + DMSAT6 Satellite Satellite 1 912 -6 7 624 1620 0 0 0 chrUextra 5142468 5142717 -23861939 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 7 624 4742 0 0 0 chrUextra 5142720 5143226 -23861430 + TABOR_LTR LTR Gypsy 1 506 0 7 624 1168 0 0 0 chrUextra 5143226 5143359 -23861297 + TABOR_I LTR Gypsy 1 133 -6203 7 624 8114 6 18 1 chrUextra 5143459 5144349 -23860307 - LSU-rRNA_Dme rRNA rRNA -413 3487 2583 7 624 2163 168 35 0 chrUextra 5144535 5144934 -23859722 + DM176_I LTR Gypsy 6008 6420 0 7 624 2096 37 34 4 chrUextra 5145070 5145339 -23859317 + R1_DM LINE R1 611 887 -4469 7 624 6473 24 7 84 chrUextra 5145439 5146320 -23858336 - TART LINE telomeric -99 14378 13581 7 624 4052 55 43 2 chrUextra 5146429 5146959 -23857697 - DMCR1A LINE CR1 -737 3733 3182 7 624 2962 49 25 0 chrUextra 5146952 5147319 -23857337 - DMCR1A LINE CR1 -1487 2983 2608 7 624 2094 30 0 22 chrUextra 5148036 5148307 -23856349 + DMCR1A LINE CR1 5 269 -4201 7 624 3414 38 21 27 chrUextra 5148409 5149246 -23855410 + HETRP_DM Satellite Satellite 1 832 -1456 7 624 6570 55 10 6 chrUextra 5149401 5150289 -23854367 - R1_DM LINE R1 -1140 4216 3456 7 624 788 118 0 14 chrUextra 5150392 5150538 -23854118 + (TTA)n Simple_repeat Simple_repeat 1 144 0 7 624 303 352 39 23 chrUextra 5150822 5151081 -23853575 + BS LINE Jockey 347 609 -4517 7 624 2554 129 26 3 chrUextra 5151379 5152268 -23852388 - DMSAT6 Satellite Satellite -38 909 1 7 624 1189 89 63 0 chrUextra 5152369 5152559 -23852097 - IDEFIX_I LTR Gypsy -4569 1059 858 7 624 21 0 0 0 chrUextra 5152949 5152970 -23851686 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 576 230 63 58 chrUextra 5152979 5153207 -23851449 - TV1I LTR Gypsy -1939 4024 3814 7 624 4532 2 0 2 chrUextra 5153359 5153848 -23850808 - R2_DM LINE R2 -3118 489 2 7 624 3500 0 0 3 chrUextra 5153871 5154249 -23850407 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2256 7 624 3354 62 92 7 chrUextra 5154350 5155239 -23849417 + IDEFIX_I LTR Gypsy 2688 3652 -1976 7 624 2511 97 45 20 chrUextra 5155339 5156229 -23848427 - DMSAT6 Satellite Satellite -84 911 1 7 624 3511 39 2 2 chrUextra 5156329 5156746 -23847910 + LSU-rRNA_Dme rRNA rRNA 2144 2560 -1340 7 624 4293 6 0 2 chrUextra 5156752 5157219 -23847437 + R2_DM LINE R2 3 468 -3139 7 624 1005 128 0 0 chrUextra 5157319 5157475 -23847181 + ROVER-I_DM LTR Gypsy 5153 5308 -1276 7 624 754 218 0 11 chrUextra 5157510 5157686 -23846970 + ROVER-I_DM LTR Gypsy 5990 6163 -421 7 624 1675 115 41 13 chrUextra 5157881 5158199 -23846457 + ROVER-I_DM LTR Gypsy 6153 6479 -105 7 624 3725 192 17 22 chrUextra 5158309 5159179 -23845477 + SAR_DM Satellite Satellite 391 1256 -216 7 624 942 27 0 0 chrUextra 5159088 5159199 -23845457 - ARS406_DM Unknown Unknown -164 189 79 7 624 584 178 47 14 chrUextra 5159485 5159633 -23845023 - DNAREP1_DM LINE Penelope -441 153 1 7 624 7493 26 0 15 chrUextra 5160289 5161179 -23843477 + FW_DM LINE Jockey 1396 2272 -2420 7 624 3767 179 22 21 chrUextra 5161279 5162168 -23842488 + SAR_DM Satellite Satellite 1 889 -378 7 624 802 0 11 0 chrUextra 5163259 5163354 -23841302 + R1_DM LINE R1 4971 5066 -290 7 624 1004 35 0 0 chrUextra 5163351 5163465 -23841191 + R1_DM LINE R1 5243 5356 0 7 624 4715 66 3 7 chrUextra 5163498 5164111 -23840545 + R1_DM LINE R1 1 611 -4745 7 624 312 56 0 0 chrUextra 5164113 5164149 -23840507 + R1_DM LINE R1 1247 1282 -4074 7 624 8010 1 0 3 chrUextra 5164249 5165139 -23839517 + ACCORD_I LTR Gypsy 297 1183 -5105 7 624 4960 16 0 0 chrUextra 5165239 5165800 -23838856 - DMRT1B LINE R1 -1708 3475 2915 7 624 2936 15 0 0 chrUextra 5165794 5166129 -23838527 - DMRT1B LINE R1 -2373 2810 2476 7 624 489 170 19 9 chrUextra 5166230 5166337 -23838319 + HETA LINE telomeric 5803 5910 -171 7 624 27 49 0 0 chrUextra 5166347 5166388 -23838268 + AT_rich Low_complexity Low_complexity 1 41 0 7 624 5301 99 99 33 chrUextra 5167228 5168099 -23836557 - Gypsy12_I LTR Gypsy -4160 1386 459 7 624 7297 34 8 15 chrUextra 5168207 5169096 -23835560 - BATUMI_I LTR Pao -6071 1892 1010 7 624 1233 0 24 18 chrUextra 5169198 5169362 -23835294 - NTS_DM Other Other 0 240 76 7 624 2660 146 10 28 chrUextra 5169361 5170084 -23834572 - G6_DM LINE Jockey 0 2042 1739 7 624 1046 32 25 25 chrUextra 5170185 5170343 -23834313 + NTS_DM Other Other 83 240 0 7 624 1173 8 0 8 chrUextra 5170343 5170477 -23834179 + NTS_DM Other Other 1 133 -107 7 624 1294 25 0 6 chrUextra 5170477 5170639 -23834017 + NTS_DM Other Other 38 198 -42 7 624 909 18 0 27 chrUextra 5170704 5170816 -23833840 + NTS_DM Other Other 25 133 -107 7 624 1247 36 0 12 chrUextra 5170816 5170982 -23833674 + NTS_DM Other Other 38 201 -39 7 624 307 0 0 75 chrUextra 5171034 5171074 -23833582 + NTS_DM Other Other 25 61 -179 7 624 2023 0 0 0 chrUextra 5171174 5171390 -23833266 - HOBO DNA hAT -2800 216 1 7 624 809 51 67 25 chrUextra 5172163 5172283 -23832373 - ROVER-LTR_DM LTR Gypsy -242 125 1 7 624 2648 165 42 10 chrUextra 5172283 5172860 -23831796 - ROVER-I_DM LTR Gypsy 0 6584 5990 7 624 980 134 0 0 chrUextra 5172895 5173052 -23831604 - ROVER-I_DM LTR Gypsy -1276 5308 5152 7 624 3321 39 115 0 chrUextra 5173152 5173588 -23831068 - PROTOP DNA P -3994 486 1 7 624 3910 181 16 20 chrUextra 5174141 5175030 -23829626 - SAR_DM Satellite Satellite -321 1151 267 7 624 8025 8 8 0 chrUextra 5175130 5176019 -23828637 + STALKER4_I LTR Gypsy 4156 5051 -1479 7 624 21 0 0 0 chrUextra 5176857 5176878 -23827778 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 629 51 13 0 chrUextra 5176930 5177008 -23827648 - NINJA_LTR LTR Pao -1 316 238 7 624 2565 104 16 18 chrUextra 5177108 5177996 -23826660 - DMSAT6 Satellite Satellite -95 886 1 7 624 3958 183 7 11 chrUextra 5178098 5178953 -23825703 - SAR_DM Satellite Satellite -430 1042 191 7 624 931 77 0 0 chrUextra 5178856 5178986 -23825670 + ARS406_DM Unknown Unknown 1 130 -223 7 624 2203 21 12 131 chrUextra 5179086 5179422 -23825234 + DM176_LTR LTR Gypsy 212 507 0 7 624 994 42 0 0 chrUextra 5179429 5179548 -23825108 - MDG1_I LTR Gypsy -5818 778 660 7 624 2808 86 29 10 chrUextra 5179542 5179953 -23824703 - MDG1_I LTR Gypsy -6177 419 1 7 624 980 291 57 22 chrUextra 5180075 5180531 -23824125 - G6_DM LINE Jockey -1305 737 266 7 624 254 81 0 51 chrUextra 5180687 5180726 -23823930 + NTS_DM Other Other 2 38 -202 7 624 1798 28 0 0 chrUextra 5180752 5180964 -23823692 - G2_DM LINE Jockey -32 3070 2859 7 624 763 88 276 17 chrUextra 5181123 5181343 -23823313 - Gypsy11_LTR LTR Gypsy 0 452 175 7 624 2490 106 209 2 chrUextra 5181432 5181953 -23822703 - HMSBEAGLE_I LTR Gypsy -4530 1999 1371 7 624 4475 38 80 0 chrUextra 5182066 5182942 -23821714 + Baggins1 LINE LOA 3381 4326 -1127 7 624 3974 9 4 4 chrUextra 5183042 5183499 -23821157 + PROTOP DNA P 4024 4480 0 7 624 2650 97 23 49 chrUextra 5183499 5183931 -23820725 + TART LINE telomeric 6926 7346 -7131 7 624 4064 172 12 24 chrUextra 5184032 5184915 -23819741 - SAR_DM Satellite Satellite -354 1118 246 7 624 266 133 0 0 chrUextra 5184875 5184920 -23819736 + ARS406_DM Unknown Unknown 1 45 -308 7 624 7799 8 28 1 chrUextra 5185020 5185909 -23818747 - Invader3_I LTR Gypsy -2571 2317 1405 7 624 485 84 0 0 chrUextra 5186998 5187069 -23817587 + DMTOM1_LTR LTR Gypsy 190 260 -150 7 624 254 242 61 0 chrUextra 5187098 5187197 -23817459 - TOM_I LTR Gypsy -184 5928 5824 7 624 2222 260 24 8 chrUextra 5187227 5187882 -23816774 - TOM_I LTR Gypsy -504 5608 4943 7 624 4532 30 0 0 chrUextra 5187987 5188516 -23816140 + FW_DM LINE Jockey 4161 4689 -3 7 624 3056 25 8 0 chrUextra 5188512 5188875 -23815781 - ROO_I LTR Pao -4051 4205 3840 7 624 8290 2 0 0 chrUextra 5188975 5189863 -23814793 - BS LINE Jockey -211 4915 4028 7 624 6284 85 56 5 chrUextra 5189963 5190851 -23813805 + HMSBEAGLE_I LTR Gypsy 2435 3368 -3161 7 624 354 24 0 0 chrUextra 5190951 5190992 -23813664 - R1_DM LINE R1 -5315 41 1 7 624 3880 22 71 0 chrUextra 5191025 5191839 -23812817 - R1_DM LINE R1 0 5356 4485 7 624 2792 131 11 21 chrUextra 5191939 5192414 -23812242 + TAHRE LINE telomeric 9986 10455 -8 7 624 2739 105 0 29 chrUextra 5192407 5192827 -23811829 + TART_B1 LINE telomeric 3707 4114 -6540 7 624 2613 114 18 8 chrUextra 5192930 5193815 -23810841 + DMSAT6 Satellite Satellite 1 894 -64 7 624 3791 184 15 21 chrUextra 5193925 5194792 -23809864 + SAR_DM Satellite Satellite 369 1230 -242 7 624 596 54 0 0 chrUextra 5194729 5194803 -23809853 - ARS406_DM Unknown Unknown -164 189 116 7 624 309 51 0 0 chrUextra 5195492 5195531 -23809125 + (TA)n Simple_repeat Simple_repeat 2 40 0 7 624 2529 98 3 41 chrUextra 5195893 5196777 -23807879 - DMSAT6 Satellite Satellite -82 850 1 7 624 3171 212 20 24 chrUextra 5196879 5197760 -23806896 + SAR_DM Satellite Satellite 376 1253 -219 7 624 26 30 0 0 chrUextra 5197902 5197935 -23806721 + AT_rich Low_complexity Low_complexity 1 33 0 7 624 44 20 0 0 chrUextra 5197947 5197998 -23806658 + AT_rich Low_complexity Low_complexity 1 51 0 7 624 429 45 0 15 chrUextra 5198013 5198081 -23806575 + HOBO DNA hAT 2422 2488 -528 7 624 860 162 12 6 chrUextra 5198083 5198244 -23806412 + HOBO DNA hAT 2855 3016 0 7 624 1427 95 266 21 chrUextra 5198856 5199145 -23805511 - Invader2_I LTR Gypsy -814 3778 3419 7 624 2498 35 9 6 chrUextra 5199145 5199460 -23805196 + IDEFIX_LTR LTR Gypsy 1 316 -278 7 624 21 0 0 0 chrUextra 5199460 5199481 -23805175 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 2209 35 4 0 chrUextra 5199483 5199743 -23804913 - CIRCE LINE Composite -1027 5329 5069 7 624 262 250 12 23 chrUextra 5200133 5200219 -23804437 + (CATA)n Simple_repeat Simple_repeat 1 85 0 7 624 436 252 17 17 chrUextra 5200893 5201010 -23803646 - DM297_I LTR Gypsy -2673 3494 3378 7 624 3288 204 42 15 chrUextra 5200983 5201719 -23802937 - TOM_I LTR Gypsy -2954 3158 2403 7 624 2661 109 38 12 chrUextra 5201819 5202707 -23801949 - DMSAT6 Satellite Satellite -94 910 1 7 624 2601 104 34 24 chrUextra 5202807 5203695 -23800961 + DMSAT6 Satellite Satellite 1 897 -6 7 624 1673 123 0 0 chrUextra 5203795 5204030 -23800626 + HMSBEAGLE_I LTR Gypsy 4539 4773 -1756 7 624 1091 97 0 0 chrUextra 5204024 5204168 -23800488 + HMSBEAGLE_I LTR Gypsy 4881 5024 -1505 7 624 847 84 8 8 chrUextra 5204178 5204298 -23800358 + HMSBEAGLE_I LTR Gypsy 234 353 -6176 7 624 1687 164 0 0 chrUextra 5204421 5204683 -23799973 + HMSBEAGLE_I LTR Gypsy 1212 1473 -5056 7 624 2826 123 4 4 chrUextra 5204783 5205275 -23799381 + BATUMI_I LTR Pao 3993 4560 -3354 7 624 3229 60 2 0 chrUextra 5205273 5205671 -23798985 + BATUMI_I LTR Pao 4364 4762 -3201 7 624 7237 49 2 0 chrUextra 5205776 5206659 -23797997 - TART LINE telomeric -8442 6035 5151 7 624 325 138 0 17 chrUextra 5206759 5206818 -23797838 + MDG1_LTR LTR Gypsy 359 416 -26 7 624 2011 289 65 11 chrUextra 5206819 5207646 -23797010 + Gypsy4_I LTR Gypsy 1741 2612 -3676 7 624 1116 22 0 0 chrUextra 5208500 5208635 -23796021 + (GAGAA)n Simple_repeat Simple_repeat 5 139 0 7 624 389 296 19 19 chrUextra 5208954 5209116 -23795540 - MDG3_I LTR Gypsy -1562 3424 3263 7 624 314 329 7 7 chrUextra 5209425 5209566 -23795090 - Invader3_I LTR Gypsy -1859 3029 2889 7 624 1805 192 20 25 chrUextra 5209743 5210143 -23794513 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 624 2724 77 143 6 chrUextra 5210142 5210611 -23794045 - Gypsy12_I LTR Gypsy 0 5546 5014 7 624 989 300 50 28 chrUextra 5210861 5211403 -23793253 - Copia_I LTR Copia -3689 904 351 7 624 477 17 0 0 chrUextra 5211699 5211759 -23792897 + DM1731_I LTR Copia 3917 3976 0 7 624 2876 36 0 0 chrUextra 5211759 5212095 -23792561 + DM1731_LTR LTR Copia 1 336 0 7 624 2297 55 10 3 chrUextra 5212095 5212391 -23792265 + IDEFIX_I LTR Gypsy 5331 5628 0 7 624 1623 31 0 0 chrUextra 5212391 5212587 -23792069 + IDEFIX_LTR LTR Gypsy 1 196 -398 7 624 3381 187 13 21 chrUextra 5212687 5213575 -23791081 - SAR_DM Satellite Satellite -837 881 1 7 624 7676 25 2 0 chrUextra 5213675 5214563 -23790093 - IDEFIX_I LTR Gypsy -3183 2445 1556 7 624 3109 17 0 3 chrUextra 5214663 5215011 -23789645 + QUASIMODO_LTR LTR Gypsy 311 657 -1 7 624 2194 193 30 35 chrUextra 5215011 5215551 -23789105 + TAHRE LINE telomeric 9281 9817 -646 7 624 4595 160 6 42 chrUextra 5215651 5216539 -23788117 - HETA LINE telomeric -48 6033 5178 7 624 4162 176 11 8 chrUextra 5216641 5217515 -23787141 - SAR_DM Satellite Satellite -416 1056 180 7 624 2817 86 32 10 chrUextra 5217626 5218509 -23786147 + DMSAT6 Satellite Satellite 1 902 -97 7 624 2624 108 15 18 chrUextra 5218637 5219500 -23785156 + DMSAT6 Satellite Satellite 1 860 0 7 624 4445 33 50 0 chrUextra 5219941 5220487 -23784169 + PROTOP DNA P 1 573 -3907 7 624 4563 42 39 142 chrUextra 5221583 5222324 -23782332 + CIRCE LINE Composite 5328 5992 -364 7 624 1004 76 0 0 chrUextra 5222321 5222453 -23782203 + CIRCE LINE Composite 6225 6356 0 7 624 3056 19 66 0 chrUextra 5222561 5223246 -23781410 + R1_DM LINE R1 4326 5055 -301 7 624 813 43 0 0 chrUextra 5223245 5223339 -23781317 + R1_DM LINE R1 5263 5356 0 7 624 534 55 68 0 chrUextra 5223372 5223445 -23781211 + R1_DM LINE R1 1 78 -5278 7 624 7646 16 17 8 chrUextra 5224535 5225422 -23779234 - SSU-rRNA_Dme rRNA rRNA -427 1568 674 7 624 7290 1 0 72 chrUextra 5225522 5226409 -23778247 - LSU-rRNA_Dme rRNA rRNA -1014 2886 2064 7 624 1380 104 9 23 chrUextra 5226510 5226726 -23777930 + Gypsy12A_LTR LTR Gypsy 2027 2239 -41 7 624 3383 38 31 2 chrUextra 5226739 5227159 -23777497 + PROTOP DNA P 81 512 -3968 7 624 28 71 0 0 chrUextra 5227298 5227354 -23777302 + AT_rich Low_complexity Low_complexity 1 56 0 7 624 4723 20 4 0 chrUextra 5227496 5228043 -23776613 + DOC2_DM LINE Jockey 913 1461 -3332 7 624 2849 39 0 20 chrUextra 5228039 5228383 -23776273 + G5A_DM LINE Jockey 2461 2797 -44 7 624 6858 34 1 5 chrUextra 5228483 5229294 -23775362 + FW_DM LINE Jockey 3885 4692 0 7 624 619 54 0 0 chrUextra 5229296 5229370 -23775286 - R1_DM LINE R1 -3966 1390 1317 7 624 6982 14 1 9 chrUextra 5229543 5230354 -23774302 + STALKER4_I LTR Gypsy 1064 1868 -4662 7 624 2697 200 105 19 chrUextra 5230457 5231200 -23773456 - Gypsy12_LTR LTR Gypsy -311 2025 1219 7 624 253 213 103 32 chrUextra 5231188 5231314 -23773342 - Gypsy12A_LTR LTR Gypsy -566 1714 1580 7 624 3210 14 0 6 chrUextra 5231444 5231803 -23772853 - R2_DM LINE R2 -3248 359 3 7 624 4794 13 2 0 chrUextra 5231801 5232331 -23772325 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2051 7 624 4075 179 10 18 chrUextra 5232433 5233313 -23771343 - SAR_DM Satellite Satellite -354 1118 246 7 624 1618 6 0 0 chrUextra 5233872 5234046 -23770610 - SSU-rRNA_Dme rRNA rRNA 0 1995 1822 7 624 2317 23 0 0 chrUextra 5234046 5234304 -23770352 - Gypsy6_LTR LTR Gypsy 0 407 150 7 624 5913 22 19 1 chrUextra 5234404 5235083 -23769573 - DM1731_I LTR Copia -867 3109 2419 7 624 2121 9 0 0 chrUextra 5235050 5235283 -23769373 - DM1731_I LTR Copia -1786 2190 1958 7 624 7028 51 11 2 chrUextra 5235390 5236275 -23768381 - R1_DM LINE R1 -4207 1149 257 7 624 7804 12 1 1 chrUextra 5236376 5237262 -23767394 - R1_DM LINE R1 -1137 4219 3334 7 624 2356 17 55 0 chrUextra 5237362 5237651 -23767005 + Copia2_I LTR Copia 666 970 -3192 7 624 5152 11 3 2 chrUextra 5237674 5238248 -23766408 + Copia2_I LTR Copia 1879 2453 -1709 7 624 5751 8 0 0 chrUextra 5238348 5238997 -23765659 - G6_DM LINE Jockey -1393 649 1 7 624 310 202 24 37 chrUextra 5238996 5239078 -23765578 + HETRP_DM Satellite Satellite 1602 1682 -190 7 624 210 37 0 0 chrUextra 5239195 5239222 -23765434 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 624 4798 53 106 55 chrUextra 5239334 5240220 -23764436 + R1_DM LINE R1 1017 1947 -3409 7 624 23 68 0 0 chrUextra 5240691 5240735 -23763921 + AT_rich Low_complexity Low_complexity 1 44 0 7 624 259 207 6 91 chrUextra 5240970 5241135 -23763521 + A-rich Low_complexity Low_complexity 1 151 0 7 624 600 14 0 0 chrUextra 5241306 5241379 -23763277 + NTS_DM Other Other 61 133 -107 7 624 1383 32 21 21 chrUextra 5241379 5241571 -23763085 + NTS_DM Other Other 38 229 -11 7 624 1167 8 0 0 chrUextra 5241603 5241731 -23762925 + NTS_DM Other Other 1 128 -112 7 624 3938 9 0 0 chrUextra 5241746 5242192 -23762464 - G6_DM LINE Jockey 0 2042 1597 7 624 43 0 0 0 chrUextra 5242368 5242411 -23762245 + AT_rich Low_complexity Low_complexity 1 43 0 7 625 539 340 17 10 chrUextra 5243664 5243955 -23760701 - Gypsy4_I LTR Gypsy -2815 3473 3181 7 625 288 196 0 0 chrUextra 5243940 5243996 -23760660 - DM297_I LTR Gypsy -3740 2427 2372 7 625 2570 111 22 11 chrUextra 5244268 5245150 -23759506 - DMSAT6 Satellite Satellite -149 890 1 7 625 4781 8 0 2 chrUextra 5245252 5245775 -23758881 - LSU-rRNA_Dme rRNA rRNA -545 3355 2834 7 625 438 20 0 0 chrUextra 5246085 5246136 -23758520 + (T)n Simple_repeat Simple_repeat 1 51 0 7 625 8014 9 1 2 chrUextra 5246236 5247122 -23757534 + SSU-rRNA_Dme rRNA rRNA 508 1392 -603 7 625 7666 34 1 0 chrUextra 5247222 5248108 -23756548 - MAX_I LTR Pao -5104 2810 1924 7 625 3059 6 0 0 chrUextra 5249194 5249526 -23755130 + GTWIN_I LTR Gypsy 5173 5504 -917 7 625 4196 53 11 3 chrUextra 5249516 5250080 -23754576 + GTWIN_I LTR Gypsy 5970 7044 -478 7 625 460 102 0 14 chrUextra 5250180 5250250 -23754406 - R1_DM LINE R1 -252 5104 5036 7 625 3218 36 65 4 chrUextra 5250242 5251066 -23753590 - R1_DM LINE R1 -665 4691 3746 7 625 2787 159 15 10 chrUextra 5251177 5252052 -23752604 + SAR_DM Satellite Satellite 1 879 -435 7 625 2918 6 0 9 chrUextra 5252153 5252497 -23752159 + DOC LINE Jockey 4380 4720 -5 7 625 4627 33 0 0 chrUextra 5252496 5253038 -23751618 + R1_DM LINE R1 2423 2964 -2392 7 625 2525 108 13 14 chrUextra 5253138 5254024 -23750632 + DMSAT6 Satellite Satellite 1 884 -18 7 625 7973 8 9 0 chrUextra 5254124 5255010 -23749646 + DMRT1B LINE R1 3437 4330 -853 7 625 3923 224 37 19 chrUextra 5255110 5256982 -23747674 + SAR_DM Satellite Satellite 1 1904 -220 7 625 4873 26 0 2 chrUextra 5257082 5257652 -23747004 + M4DM DNA Transib 248 816 -619 7 625 2595 27 0 0 chrUextra 5257662 5257962 -23746694 + M4DM DNA Transib 1136 1435 0 7 625 981 9 0 9 chrUextra 5258068 5258182 -23746474 - ROVER-I_DM LTR Gypsy -6369 215 103 7 625 1120 16 0 0 chrUextra 5258233 5258356 -23746300 - ROVER-I_DM LTR Gypsy -6461 123 1 7 625 2405 15 3 36 chrUextra 5258356 5258671 -23745985 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 625 2495 11 0 0 chrUextra 5258671 5258954 -23745702 - ROVER-I_DM LTR Gypsy 0 6584 6302 7 625 7932 9 1 6 chrUextra 5259054 5259940 -23744716 + Gypsy4_I LTR Gypsy 1189 2070 -4218 7 625 4332 116 28 2 chrUextra 5260040 5260925 -23743731 + QUASIMODO_I LTR Gypsy 2078 3005 -2958 7 625 48 0 0 0 chrUextra 5261637 5261685 -23742971 + AT_rich Low_complexity Low_complexity 1 48 0 7 625 2251 34 4 0 chrUextra 5262374 5262641 -23742015 - DMCR1A LINE CR1 0 4470 4203 7 625 1589 75 4 62 chrUextra 5262641 5262897 -23741759 - BATUMI_LTR LTR Pao 0 272 32 7 625 3741 194 27 20 chrUextra 5263003 5263882 -23740774 - SAR_DM Satellite Satellite -242 1230 346 7 625 3066 137 26 4 chrUextra 5263984 5264582 -23740074 + BS3_DM LINE Jockey 1 416 -1374 7 625 1601 69 10 0 chrUextra 5264578 5264781 -23739875 + BS3_DM LINE Jockey 526 730 -1060 7 625 659 13 0 0 chrUextra 5264793 5264869 -23739787 + BS3_DM LINE Jockey 1458 1533 -257 7 625 818 29 0 19 chrUextra 5264974 5265078 -23739578 + BATUMI_I LTR Pao 7183 7284 -679 7 625 907 9 0 9 chrUextra 5265078 5265193 -23739463 + STALKER4_I LTR Gypsy 6417 6530 0 7 625 3158 14 0 0 chrUextra 5265193 5265542 -23739114 + STALKER4_LTR LTR Gypsy 1 349 -53 7 625 1334 205 0 20 chrUextra 5265560 5265854 -23738802 + STALKER4_I LTR Gypsy 228 515 -6015 7 625 23 0 0 0 chrUextra 5266157 5266180 -23738476 + AT_rich Low_complexity Low_complexity 1 23 0 7 625 2377 11 0 14 chrUextra 5266348 5266628 -23738028 + Copia_LTR LTR Copia 1 276 0 7 625 1873 5 0 5 chrUextra 5266628 5266839 -23737817 + Copia_I LTR Copia 1 210 -4383 7 625 337 307 16 16 chrUextra 5267568 5267697 -23736959 - DIVER2_I LTR Pao -1779 2368 2240 7 625 8228 2 0 0 chrUextra 5267925 5268809 -23735847 + Gypsy6_I LTR Gypsy 3837 4720 -2292 7 625 2594 185 111 95 chrUextra 5268909 5269794 -23734862 + Gypsy12A_LTR LTR Gypsy 1052 1950 -330 7 625 1250 309 5 4 chrUextra 5269894 5270317 -23734339 - Invader6_I LTR Gypsy -2186 1913 1501 7 625 870 280 22 67 chrUextra 5270358 5270764 -23733892 - Invader4_I LTR Gypsy -1505 908 521 7 625 4963 2 0 0 chrUextra 5270879 5271426 -23733230 + DOC LINE Jockey 4178 4724 -1 7 625 1676 143 65 28 chrUextra 5271424 5271748 -23732908 + MDG3_I LTR Gypsy 1580 1915 -3071 7 625 804 48 0 71 chrUextra 5271864 5271976 -23732680 - MAX_I LTR Pao -7810 104 1 7 625 1802 122 29 0 chrUextra 5271996 5272275 -23732381 - MAX_LTR LTR Pao -34 287 1 7 625 3548 54 0 7 chrUextra 5272284 5272749 -23731907 - MAX_I LTR Pao -2 7912 7451 7 625 2609 184 14 12 chrUextra 5272849 5273734 -23730922 - SAR_DM Satellite Satellite -432 885 1 7 625 716 191 13 26 chrUextra 5273836 5273992 -23730664 + HETRP_DM Satellite Satellite 1529 1682 -190 7 625 707 186 7 14 chrUextra 5274120 5274262 -23730394 + HETRP_DM Satellite Satellite 1529 1669 -203 7 625 683 220 71 48 chrUextra 5274344 5274554 -23730102 + HETRP_DM Satellite Satellite 1470 1684 -188 7 625 3808 2 0 0 chrUextra 5274819 5275227 -23729429 + BS2 LINE Jockey 4314 4721 0 7 625 198 0 0 0 chrUextra 5275233 5275255 -23729401 + (A)n Simple_repeat Simple_repeat 1 22 0 7 625 954 87 0 0 chrUextra 5275578 5275704 -23728952 - R1-2_DM LINE R1 -2125 1091 966 7 625 653 0 0 0 chrUextra 5275804 5275874 -23728782 + ROO_I LTR Pao 8187 8256 0 7 625 3999 2 0 0 chrUextra 5275874 5276302 -23728354 + ROO_LTR LTR Pao 1 428 0 7 625 3108 26 41 0 chrUextra 5276302 5276689 -23727967 - IDEFIX_I LTR Gypsy -592 5036 4634 7 625 3521 191 16 30 chrUextra 5276789 5277673 -23726983 - SAR_DM Satellite Satellite -315 1157 287 7 625 3359 193 42 18 chrUextra 5277774 5278659 -23725997 + SAR_DM Satellite Satellite 298 1203 -269 7 625 4224 4 2 2 chrUextra 5278759 5279238 -23725418 + DOC LINE Jockey 4244 4722 -3 7 625 240 111 0 62 chrUextra 5279744 5279792 -23724864 + XDMR Unknown Unknown 317 361 0 7 625 3905 170 15 33 chrUextra 5279751 5280629 -23724027 - SAR_DM Satellite Satellite -369 1103 242 7 625 3750 192 21 11 chrUextra 5280735 5281609 -23723047 + SAR_DM Satellite Satellite 195 1076 -396 7 625 5617 20 138 1 chrUextra 5281714 5282474 -23722182 - DOC2_DM LINE Jockey -2367 2426 1563 7 625 685 68 0 0 chrUextra 5282508 5282596 -23722060 - DMCR1A LINE CR1 0 4470 4383 7 625 6965 29 10 37 chrUextra 5282699 5283584 -23721072 + G_DM LINE Jockey 3033 3893 -453 7 625 5791 26 34 0 chrUextra 5283684 5284569 -23720087 - R1_DM LINE R1 -2231 3125 2211 7 625 731 97 16 64 chrUextra 5285366 5285554 -23719102 + GA-rich Low_complexity Low_complexity 1 179 0 7 625 8052 7 1 1 chrUextra 5285654 5286539 -23718117 - R1_DM LINE R1 -683 4673 3789 7 625 7935 11 0 0 chrUextra 5286639 5287523 -23717133 + ROO_I LTR Pao 1624 2507 -5749 7 625 2800 76 14 32 chrUextra 5287623 5288507 -23716149 - DMSAT6 Satellite Satellite -46 867 1 7 625 4211 28 69 5 chrUextra 5288608 5289491 -23715165 - DMRT1B LINE R1 -2947 2236 1297 7 625 1097 63 221 0 chrUextra 5289591 5289749 -23714907 + Gypsy12_I LTR Gypsy 5354 5546 0 7 625 933 136 141 37 chrUextra 5289748 5289939 -23714717 + Gypsy12_LTR LTR Gypsy 1 211 -2125 7 625 1156 258 5 97 chrUextra 5289942 5290385 -23714271 + Gypsy12_LTR LTR Gypsy 402 803 -1533 7 625 3640 195 14 28 chrUextra 5290575 5291459 -23713197 - SAR_DM Satellite Satellite -470 872 1 7 625 4930 32 79 3 chrUextra 5291559 5292443 -23712213 - R1_DM LINE R1 -145 5211 4261 7 625 1409 105 62 8 chrUextra 5292836 5293095 -23711561 + DMSAT6 Satellite Satellite 133 405 -65 7 625 3865 198 13 20 chrUextra 5293527 5294411 -23710245 + SAR_DM Satellite Satellite 1 877 -217 7 625 7882 18 0 1 chrUextra 5294511 5295395 -23709261 + HETA LINE telomeric 1872 2754 -3327 7 625 2901 24 71 9 chrUextra 5295495 5296127 -23708529 + R1_DM LINE R1 4385 5055 -301 7 625 798 32 0 11 chrUextra 5296126 5296221 -23708435 + R1_DM LINE R1 5263 5356 0 7 625 926 64 24 0 chrUextra 5296254 5296379 -23708277 + R1_DM LINE R1 1 128 -5228 7 625 2918 167 41 14 chrUextra 5296482 5297065 -23707591 + Gypsy12_LTR LTR Gypsy 1667 2265 -71 7 625 1216 107 297 44 chrUextra 5297070 5297363 -23707293 + Gypsy12_I LTR Gypsy 366 732 -4814 7 625 840 137 0 7 chrUextra 5297463 5297603 -23707053 + ARS406_DM Unknown Unknown 51 189 -164 7 625 3100 198 82 14 chrUextra 5297500 5298340 -23706316 - SAR_DM Satellite Satellite -203 1269 373 7 625 7028 13 5 11 chrUextra 5298447 5298863 -23705793 - DM176_I LTR Gypsy -5476 944 529 7 625 181 30 29 57 chrUextra 5298863 5298898 -23705758 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 625 7028 13 5 11 chrUextra 5298898 5299329 -23705327 - DM176_I LTR Gypsy -5892 528 103 7 625 2192 53 94 0 chrUextra 5299431 5299751 -23704905 + PROTOP_B DNA P 634 983 -170 7 625 2222 57 11 0 chrUextra 5299903 5300185 -23704471 - ZAM_I LTR Gypsy -107 7383 7099 7 625 835 75 44 7 chrUextra 5300180 5300315 -23704341 - ZAM_I LTR Gypsy -714 6776 6637 7 625 2594 119 7 23 chrUextra 5300415 5301296 -23703360 - DMSAT6 Satellite Satellite -105 866 1 7 625 3579 200 13 27 chrUextra 5301399 5302283 -23702373 + SAR_DM Satellite Satellite 1 871 -242 7 625 7582 19 30 0 chrUextra 5302383 5303262 -23701394 + DOC2_DM LINE Jockey 2168 3072 -1721 7 625 7665 20 2 0 chrUextra 5303367 5304251 -23700405 - TAHRE LINE telomeric -5717 4746 3861 7 625 2567 128 27 21 chrUextra 5304355 5305235 -23699421 + DMSAT6 Satellite Satellite 1 885 -69 7 625 4090 69 55 24 chrUextra 5305335 5306002 -23698654 - STALKER4_I LTR Gypsy -4959 1571 884 7 625 1935 18 5 0 chrUextra 5306002 5306219 -23698437 - Invader1_LTR LTR Gypsy 0 423 206 7 625 4021 172 16 27 chrUextra 5306319 5307203 -23697453 - SAR_DM Satellite Satellite -265 1207 334 7 625 5374 2 0 0 chrUextra 5307303 5307875 -23696781 - HOBO DNA hAT -2444 572 1 7 625 1568 56 9 32 chrUextra 5308287 5308507 -23696149 + BATUMI_LTR LTR Pao 58 272 0 7 625 4798 43 36 14 chrUextra 5308507 5309168 -23695488 + BATUMI_I LTR Pao 1 676 -7287 7 625 7687 3 12 0 chrUextra 5309271 5310155 -23694501 + QUASIMODO_I LTR Gypsy 990 1884 -4176 7 625 326 101 26 115 chrUextra 5310256 5310334 -23694322 - TIRANT_I LTR Gypsy -7621 71 1 7 625 1356 48 0 0 chrUextra 5310766 5310932 -23693724 - Gypsy10_LTR LTR Gypsy -198 166 1 7 625 21 0 0 0 chrUextra 5310963 5310984 -23693672 + AT_rich Low_complexity Low_complexity 1 21 0 7 625 7872 10 10 6 chrUextra 5311239 5312123 -23692533 - FW_DM LINE Jockey -1956 2736 1849 7 625 7167 17 2 9 chrUextra 5312223 5313107 -23691549 + DM412 LTR Gypsy 1146 2023 -4874 7 625 7818 11 0 1 chrUextra 5313207 5314065 -23690591 + DMRT1B LINE R1 4327 5183 0 7 625 7793 3 7 0 chrUextra 5314191 5315075 -23689581 - DM176_I LTR Gypsy -3889 2531 1642 7 625 6619 30 14 53 chrUextra 5315175 5316059 -23688597 - NINJA_I LTR Pao -5009 1002 154 7 625 2545 264 27 24 chrUextra 5316161 5317043 -23687613 - DM297_I LTR Gypsy -1872 4295 3411 7 625 7546 33 0 0 chrUextra 5317143 5318027 -23686629 + G2_DM LINE Jockey 2107 2990 -112 7 625 2844 84 25 10 chrUextra 5319111 5319995 -23684661 + DMSAT6 Satellite Satellite 1 896 -74 7 625 3346 96 34 36 chrUextra 5320095 5320624 -23684032 - Gypsy12_I LTR Gypsy -5018 528 1 7 625 2191 120 20 14 chrUextra 5320624 5320978 -23683678 - Gypsy12A_LTR LTR Gypsy 0 2280 1925 7 625 383 296 18 25 chrUextra 5321158 5321321 -23683335 + MDG3_I LTR Gypsy 3263 3424 -1562 7 625 334 306 24 53 chrUextra 5321658 5321865 -23682791 + BLASTOPIA_I LTR Gypsy 3541 3741 -740 7 625 780 189 289 60 chrUextra 5322067 5322478 -23682178 - TAHRE LINE telomeric -3986 10491 9807 7 625 2971 115 4 46 chrUextra 5322473 5322947 -23681709 - Gypsy12_LTR LTR Gypsy -23 2313 1860 7 625 7632 34 1 0 chrUextra 5324031 5324915 -23679741 + BATUMI_I LTR Pao 4536 5420 -2543 7 625 1018 53 0 0 chrUextra 5325015 5325147 -23679509 + ARS406_DM Unknown Unknown 58 189 -164 7 625 3639 191 14 22 chrUextra 5325044 5325896 -23678760 - SAR_DM Satellite Satellite -203 1269 425 7 625 1546 294 54 36 chrUextra 5325998 5326851 -23677805 - DOC LINE Jockey -1053 3672 2805 7 625 6666 17 0 59 chrUextra 5326981 5327864 -23676792 - DM176_I LTR Gypsy -5419 1001 171 7 625 4507 86 66 29 chrUextra 5328127 5328846 -23675810 + TART LINE telomeric 9650 10365 -4112 7 625 4065 0 0 0 chrUextra 5328947 5329391 -23675265 + FW_DM LINE Jockey 4249 4692 0 7 625 980 285 8 13 chrUextra 5329392 5329780 -23674876 - MDG3_I LTR Gypsy -962 4024 3481 7 625 21 89 0 0 chrUextra 5331689 5331745 -23672911 + AT_rich Low_complexity Low_complexity 1 56 0 7 625 2652 57 6 6 chrUextra 5331896 5332233 -23672423 - R1_DM LINE R1 -5019 337 1 7 625 4318 25 39 2 chrUextra 5332266 5332779 -23671877 - R1_DM LINE R1 0 5356 4825 7 625 5810 85 3 9 chrUextra 5332879 5333762 -23670894 + BATUMI_I LTR Pao 4281 5236 -2678 7 625 7070 27 75 0 chrUextra 5333862 5334745 -23669911 + R1_DM LINE R1 1564 2512 -2844 7 625 272 175 117 58 chrUextra 5335002 5335105 -23669551 - Gypsy2_LTR LTR Gypsy -150 203 95 7 625 2169 274 7 48 chrUextra 5335119 5335722 -23668934 - Gypsy2_I LTR Gypsy -91 6044 5467 7 625 4654 194 5 0 chrUextra 5335828 5336711 -23667945 + ROVER-I_DM LTR Gypsy 3505 4391 -2193 7 625 2896 3 0 0 chrUextra 5336811 5337143 -23667513 - ROO_I LTR Pao -6875 1381 1050 7 625 4635 7 2 0 chrUextra 5337115 5337673 -23666983 + ROO_I LTR Pao 7698 8256 0 7 625 3465 199 14 22 chrUextra 5337798 5338677 -23665979 - SAR_DM Satellite Satellite -216 1256 385 7 625 5374 5 2 22 chrUextra 5338777 5339419 -23665237 + BATUMI_I LTR Pao 6674 7302 -661 7 625 2031 4 0 4 chrUextra 5339432 5339660 -23664996 - BATUMI_I LTR Pao -1543 6420 6194 7 625 2605 94 2 34 chrUextra 5339760 5340639 -23664017 - DMSAT6 Satellite Satellite -67 851 1 7 625 7294 20 6 0 chrUextra 5340743 5341626 -23663030 + IDEFIX_I LTR Gypsy 4172 5059 -569 7 625 843 70 101 0 chrUextra 5341726 5341855 -23662801 - G2_DM LINE Jockey -434 2668 2527 7 625 1037 36 0 0 chrUextra 5341851 5341988 -23662668 + G2_DM LINE Jockey 2934 3070 -32 7 625 4360 47 24 0 chrUextra 5341988 5342542 -23662114 - G2_DM LINE Jockey -9 3093 2527 7 625 539 28 0 0 chrUextra 5342538 5342609 -23662047 + G2_DM LINE Jockey 2934 3004 -98 7 625 692 191 0 7 chrUextra 5342709 5342846 -23661810 + DMLTR5 LTR Gypsy 131 266 0 7 625 372 95 270 14 chrUextra 5342845 5342977 -23661679 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 7 625 259 128 0 21 chrUextra 5343207 5343255 -23661401 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 625 259 128 0 21 chrUextra 5343500 5343548 -23661108 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 625 6371 28 8 3 chrUextra 5343819 5344575 -23660081 + DMRT1A LINE R1 1 760 -4423 7 625 1762 5 84 0 chrUextra 5344675 5344888 -23659768 - STALKER4_LTR LTR Gypsy -108 294 64 7 625 954 66 96 0 chrUextra 5344885 5345021 -23659635 - FW2_DM LINE Jockey -3429 532 384 7 625 1123 82 3 3 chrUextra 5345023 5345191 -23659465 - FW2_DM LINE Jockey -3805 156 1 7 625 3957 169 13 19 chrUextra 5345669 5346527 -23658129 + SAR_DM Satellite Satellite 224 1076 -396 7 625 3796 186 11 18 chrUextra 5346643 5347517 -23657139 - SAR_DM Satellite Satellite -359 1113 246 7 625 270 128 0 0 chrUextra 5347477 5347524 -23657132 + ARS406_DM Unknown Unknown 1 47 -306 7 625 3791 215 15 8 chrUextra 5347624 5348490 -23656166 + TABOR_I LTR Gypsy 4173 5044 -1292 7 625 7522 5 9 0 chrUextra 5348607 5349490 -23655166 + DM176_I LTR Gypsy 1429 2319 -4101 7 625 1620 12 1 0 chrUextra 5349590 5350271 -23654385 + (TTCTC)n Simple_repeat Simple_repeat 1 681 0 7 625 1142 73 0 6 chrUextra 5350282 5350462 -23654194 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 7 625 1470 35 0 0 chrUextra 5350573 5350743 -23653913 + PROTOP DNA P 4311 4480 0 7 625 21 89 0 0 chrUextra 5351271 5351327 -23653329 + AT_rich Low_complexity Low_complexity 1 56 0 7 625 37 39 0 0 chrUextra 5351835 5351886 -23652770 + AT_rich Low_complexity Low_complexity 1 51 0 7 625 22 35 0 0 chrUextra 5351987 5352016 -23652640 + AT_rich Low_complexity Low_complexity 1 29 0 7 625 254 192 41 0 chrUextra 5352213 5352286 -23652370 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 7 625 7274 30 1 10 chrUextra 5352539 5353422 -23651234 + FW_DM LINE Jockey 1139 2013 -2679 7 625 6954 32 1 12 chrUextra 5353522 5354405 -23650251 + STALKER4_I LTR Gypsy 2701 3573 -2957 7 625 7906 14 1 0 chrUextra 5354505 5355388 -23649268 - BS LINE Jockey -1412 3714 2831 7 625 3157 170 10 6 chrUextra 5355488 5356369 -23648287 - SAR_DM Satellite Satellite -601 884 1 7 625 3450 36 63 0 chrUextra 5356471 5357013 -23647643 + ROO_I LTR Pao 4482 5057 -3199 7 625 2958 21 0 0 chrUextra 5357013 5357353 -23647303 - PROTOP DNA P 0 4480 4141 7 625 3624 183 19 27 chrUextra 5357453 5358314 -23646342 + SAR_DM Satellite Satellite 377 1230 -242 7 625 676 24 12 0 chrUextra 5358251 5358335 -23646321 - ARS406_DM Unknown Unknown -164 189 105 7 625 7560 1 2 0 chrUextra 5358435 5359317 -23645339 - ACCORD_I LTR Gypsy -402 5886 5003 7 625 2959 54 24 0 chrUextra 5359417 5359790 -23644866 + TART_B1 LINE telomeric 3056 3437 -7217 7 625 4374 18 0 0 chrUextra 5359790 5360299 -23644357 - PROTOP_A DNA P 0 1105 597 7 625 5244 17 0 5 chrUextra 5360399 5361005 -23643651 - QUASIMODO_I LTR Gypsy -5457 603 1 7 625 2337 15 0 7 chrUextra 5361005 5361281 -23643375 - QUASIMODO_LTR LTR Gypsy 0 658 385 7 625 2771 195 50 58 chrUextra 5361382 5362262 -23642394 + TART LINE telomeric 8064 8936 -5541 7 625 1173 49 0 0 chrUextra 5362428 5362571 -23642085 - CIRCE LINE Composite -1376 4980 4838 7 625 976 52 7 0 chrUextra 5362567 5362695 -23641961 - CIRCE LINE Composite -1735 4621 4493 7 625 3799 90 2 2 chrUextra 5362695 5363239 -23641417 - S_DM DNA Tc1 0 1736 1193 7 625 6872 37 7 24 chrUextra 5363345 5364227 -23640429 + BATUMI_I LTR Pao 1041 1907 -6056 7 625 1995 38 0 0 chrUextra 5364327 5364564 -23640092 + DIVER_I LTR Pao 5407 5643 0 7 625 1249 112 0 108 chrUextra 5364564 5364815 -23639841 + DIVER_LTR LTR Pao 1 224 0 7 625 1654 121 94 40 chrUextra 5364836 5365208 -23639448 + HETA LINE telomeric 4958 5349 -732 7 625 2981 14 0 8 chrUextra 5365309 5365679 -23638977 + TART LINE telomeric 14104 14470 -7 7 625 3568 106 0 2 chrUextra 5365678 5366191 -23638465 + TART_B1 LINE telomeric 924 1435 -9219 7 625 3853 191 7 16 chrUextra 5366294 5367168 -23637488 - SAR_DM Satellite Satellite -361 1111 246 7 625 259 133 0 0 chrUextra 5367128 5367173 -23637483 + ARS406_DM Unknown Unknown 1 45 -308 7 625 6567 32 8 5 chrUextra 5367274 5368125 -23636531 + PROTOP DNA P 177 1030 -3450 7 625 5579 10 6 13 chrUextra 5368255 5368967 -23635689 + STALKER4_I LTR Gypsy 5824 6530 0 7 625 1446 12 0 0 chrUextra 5368967 5369136 -23635520 + STALKER4_LTR LTR Gypsy 1 169 -233 7 625 3771 239 38 26 chrUextra 5369239 5370589 -23634067 + SAR_DM Satellite Satellite 1 1365 -203 7 625 1092 164 24 19 chrUextra 5370637 5371048 -23633608 + SAR_DM Satellite Satellite 1 412 -680 7 625 403 194 0 19 chrUextra 5371206 5371311 -23633345 + XDMR_DM Unknown Unknown 258 360 0 7 625 3772 173 36 19 chrUextra 5371225 5372083 -23632573 - SAR_DM Satellite Satellite -354 1118 246 7 625 7751 14 8 0 chrUextra 5372183 5373065 -23631591 + Gypsy4_I LTR Gypsy 933 1821 -4467 7 78 4562 39 7 41 chrUextra 5373165 5374047 -23630609 + CIRCE LINE Composite 5137 5934 -422 7 626 246 132 0 0 chrUextra 5374535 5374573 -23630083 - PROTOP_B DNA P 0 1153 1116 7 626 475 184 354 0 chrUextra 5374573 5374731 -23629925 - PROTOP_B DNA P 0 1153 940 7 626 37 52 0 0 chrUextra 5374780 5374838 -23629818 + AT_rich Low_complexity Low_complexity 1 58 0 7 626 7467 33 6 1 chrUextra 5375129 5376011 -23628645 + Gypsy3_I LTR Gypsy 534 1419 -4758 7 626 838 53 21 26 chrUextra 5376111 5376243 -23628413 - BATUMI_LTR LTR Pao -134 138 32 7 626 27 87 0 0 chrUextra 5376289 5376358 -23628298 + AT_rich Low_complexity Low_complexity 1 69 0 7 626 42 20 0 0 chrUextra 5376885 5376934 -23627722 + AT_rich Low_complexity Low_complexity 1 49 0 7 626 817 278 52 27 chrUextra 5377103 5377535 -23627121 + TART LINE telomeric 13085 13306 -1171 7 626 2462 98 152 2 chrUextra 5377575 5377975 -23626681 + TART LINE telomeric 6734 7193 -7284 7 626 2911 107 71 30 chrUextra 5378075 5378665 -23625991 - TART LINE telomeric -4568 9909 9296 7 626 1330 207 24 10 chrUextra 5378653 5378946 -23625710 - TAHRE LINE telomeric -350 10113 9817 7 626 639 200 7 15 chrUextra 5379121 5379258 -23625398 - HETRP_DM Satellite Satellite -208 1664 1529 7 626 687 192 12 49 chrUextra 5379386 5379550 -23625106 - HETRP_DM Satellite Satellite -197 1675 1518 7 626 697 217 6 31 chrUextra 5379662 5379824 -23624832 - HETRP_DM Satellite Satellite -197 1675 1518 7 626 4174 13 0 0 chrUextra 5380039 5380510 -23624146 + R1_DM LINE R1 4884 5354 -2 7 626 2815 65 5 5 chrUextra 5380545 5380919 -23623737 + R1_DM LINE R1 1 374 -4982 7 626 6636 56 24 10 chrUextra 5381021 5381899 -23622757 + Gypsy7_I LTR Gypsy 2754 3643 -1341 7 626 1955 46 0 0 chrUextra 5382003 5382241 -23622415 - MDG3_I LTR Gypsy -4748 238 1 7 626 470 103 13 0 chrUextra 5382240 5382318 -23622338 - MDG3_LTR LTR Gypsy 0 267 189 7 626 1668 139 189 2 chrUextra 5382351 5382884 -23621772 - DMRT1B LINE R1 -360 4823 4191 7 626 1659 183 6 8 chrUextra 5382987 5383345 -23621311 - SAR_DM Satellite Satellite -620 852 496 7 626 2590 158 8 10 chrUextra 5383360 5383865 -23620791 - SAR_DM Satellite Satellite -569 903 400 7 626 7505 6 9 0 chrUextra 5383965 5384846 -23619810 - DM176_I LTR Gypsy -3800 2620 1732 7 626 1251 57 0 0 chrUextra 5384946 5385162 -23619494 + (TTA)n Simple_repeat Simple_repeat 1 216 0 7 626 1112 93 0 7 chrUextra 5385177 5385459 -23619197 + (TTA)n Simple_repeat Simple_repeat 1 279 0 7 626 229 339 31 31 chrUextra 5385936 5386064 -23618592 - Gypsy2_I LTR Gypsy -4664 1471 1344 7 626 6970 46 2 12 chrUextra 5388870 5389751 -23614905 + BATUMI_I LTR Pao 2780 3651 -4312 7 626 7152 33 55 0 chrUextra 5389851 5390732 -23613924 - Baggins1 LINE LOA -4090 1363 435 7 626 594 159 259 6 chrUextra 5390833 5390991 -23613665 + DNAREP1_DM LINE Penelope 125 322 -272 7 626 439 147 82 21 chrUextra 5390963 5391060 -23613596 + DNAREP1_DM LINE Penelope 167 269 -325 7 626 3093 167 46 74 chrUextra 5391067 5391713 -23612943 + Gypsy2_I LTR Gypsy 3878 4505 -1630 7 626 2379 108 7 68 chrUextra 5391813 5392692 -23611964 + DMSAT6 Satellite Satellite 1 825 -108 7 626 1158 22 0 0 chrUextra 5392794 5392931 -23611725 - IDEFIX_LTR LTR Gypsy -457 137 1 7 626 5974 34 1 3 chrUextra 5392931 5393675 -23610981 - IDEFIX_I LTR Gypsy 0 5628 4886 7 626 2533 82 26 50 chrUextra 5394756 5395634 -23609022 - DMSAT6 Satellite Satellite -144 856 1 7 626 298 143 43 34 chrUextra 5395739 5395831 -23608825 + TART LINE telomeric 8091 8156 -6321 7 626 3442 54 98 2 chrUextra 5395949 5396416 -23608240 + PROTOP DNA P 1 512 -3968 7 626 28 71 0 0 chrUextra 5396555 5396611 -23608045 + AT_rich Low_complexity Low_complexity 1 56 0 7 626 6704 48 6 2 chrUextra 5396718 5397568 -23607088 - DOC2_DM LINE Jockey -3632 1161 309 7 626 180 0 0 0 chrUextra 5397579 5397599 -23607057 + (T)n Simple_repeat Simple_repeat 1 20 0 7 626 3942 182 18 11 chrUextra 5397721 5398580 -23606076 - SAR_DM Satellite Satellite -396 1076 212 7 626 792 11 0 0 chrUextra 5398680 5398770 -23605886 + ROO_I LTR Pao 8167 8256 0 7 626 3145 22 54 0 chrUextra 5398770 5399138 -23605518 + ROO_LTR LTR Pao 1 388 -40 7 626 525 122 100 0 chrUextra 5399188 5399278 -23605378 + DNAREP1_DM LINE Penelope 496 594 0 7 626 33 25 0 0 chrUextra 5399334 5399374 -23605282 + AT_rich Low_complexity Low_complexity 1 40 0 7 626 3763 2 0 0 chrUextra 5400642 5401074 -23603582 + DOC6_DM LINE Jockey 3791 4222 0 7 626 3827 22 0 2 chrUextra 5401077 5401523 -23603133 + MDG3_I LTR Gypsy 2485 2929 -2057 7 626 2952 12 36 3 chrUextra 5401628 5401965 -23602691 - Invader1_I LTR Gypsy -1245 1941 1594 7 626 4611 15 38 2 chrUextra 5401973 5402503 -23602153 - Invader1_I LTR Gypsy -2549 637 89 7 626 2156 291 19 50 chrUextra 5402622 5403480 -23601176 + MICROPIA_I LTR Gypsy 1394 2224 -2252 7 626 1941 112 65 3 chrUextra 5403585 5403907 -23600749 + PROTOP DNA P 4139 4480 0 7 626 413 103 0 14 chrUextra 5403907 5403963 -23600693 - I_DM LINE I -1032 5199 5145 7 626 4220 26 52 0 chrUextra 5403964 5404465 -23600191 - DMCR1A LINE CR1 0 4470 3944 7 626 2309 187 21 5 chrUextra 5404574 5405440 -23599216 + SAR_DM Satellite Satellite 1 880 -562 7 626 4758 2 0 0 chrUextra 5405547 5406069 -23598587 - FW_DM LINE Jockey -2673 2019 1498 7 626 3144 16 0 0 chrUextra 5406065 5406428 -23598228 + STALKER4_I LTR Gypsy 5749 6111 -419 7 626 4477 20 47 0 chrUextra 5406531 5407409 -23597247 - R1_DM LINE R1 -1534 3822 2904 7 626 7414 30 45 0 chrUextra 5407509 5408390 -23596266 - Gypsy4_I LTR Gypsy -1797 4491 3571 7 626 423 0 0 0 chrUextra 5408490 5408536 -23596120 - TABOR_I LTR Gypsy -6290 46 1 7 626 4719 2 0 0 chrUextra 5408536 5409042 -23595614 - TABOR_LTR LTR Gypsy 0 506 1 7 626 233 0 0 161 chrUextra 5409057 5409268 -23595388 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 7 626 309 238 0 0 chrUextra 5409270 5409371 -23595285 + (CAAA)n Simple_repeat Simple_repeat 4 104 0 7 626 7954 7 9 1 chrUextra 5409471 5410352 -23594304 + Invader4_I LTR Gypsy 394 1281 -1132 7 626 4131 10 0 66 chrUextra 5410455 5410970 -23593686 + T412LTR LTR LTR 1 481 0 7 626 380 0 0 0 chrUextra 5411433 5411477 -23593179 - NOMAD_I LTR Gypsy -6528 44 1 7 626 4800 0 0 0 chrUextra 5411477 5411995 -23592661 - NOMAD_LTR LTR Gypsy 0 518 1 7 626 687 118 0 0 chrUextra 5411997 5412132 -23592524 + (TA)n Simple_repeat Simple_repeat 2 136 0 7 626 894 122 0 0 chrUextra 5412131 5412311 -23592345 + (TTTA)n Simple_repeat Simple_repeat 1 180 0 7 626 3161 154 270 27 chrUextra 5412429 5413292 -23591364 + TART LINE telomeric 9134 10206 -4271 7 626 1732 144 119 71 chrUextra 5413395 5413806 -23590850 - DNAREP1_DM LINE Penelope -163 431 1 7 626 22 56 0 0 chrUextra 5414586 5414622 -23590034 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 337 213 42 92 chrUextra 5414667 5414786 -23589870 + Copia_I LTR Copia 4401 4513 -80 7 626 47 0 0 0 chrUextra 5414873 5414920 -23589736 + AT_rich Low_complexity Low_complexity 1 47 0 7 626 347 322 44 42 chrUextra 5415891 5415923 -23588733 + Gypsy6_I LTR Gypsy 3168 3246 -3766 7 626 1621 33 19 0 chrUextra 5415923 5416137 -23588519 + TLD2 Unknown Unknown 1 218 0 7 626 347 322 44 42 chrUextra 5416137 5416231 -23588425 + Gypsy6_I LTR Gypsy 3247 3488 -3524 7 626 5551 42 148 0 chrUextra 5416338 5417218 -23587438 - TRANSIB2 DNA Transib -905 1939 930 7 626 2988 11 114 0 chrUextra 5417318 5417679 -23586977 + QUASIMODO_LTR LTR Gypsy 83 484 -174 7 626 2273 19 8 0 chrUextra 5417679 5417944 -23586712 + MDG3_LTR LTR Gypsy 1 267 0 7 626 2373 0 0 0 chrUextra 5417943 5418198 -23586458 + MDG3_I LTR Gypsy 1 255 -4731 7 626 7559 20 5 2 chrUextra 5418298 5419178 -23585478 - R1_DM LINE R1 -843 4513 3632 7 626 1253 7 7 7 chrUextra 5419278 5419428 -23585228 - Copia_I LTR Copia -4443 150 1 7 626 251 0 0 0 chrUextra 5419428 5419462 -23585194 - Copia_LTR LTR Copia 0 276 243 7 626 2456 4 0 0 chrUextra 5419462 5419738 -23584918 - Copia_LTR LTR Copia 0 276 1 7 626 2418 25 0 0 chrUextra 5419738 5420020 -23584636 - IDEFIX_LTR LTR Gypsy -312 282 1 7 626 289 98 0 0 chrUextra 5419988 5420029 -23584627 + BARI1 DNA Tc1 3 43 -1707 7 626 21 0 0 0 chrUextra 5420107 5420128 -23584528 + AT_rich Low_complexity Low_complexity 1 21 0 7 626 226 67 0 0 chrUextra 5420128 5420158 -23584498 + Invader1_LTR LTR Gypsy 1 30 -393 7 626 2335 4 4 0 chrUextra 5420261 5420518 -23584138 + QUASIMODO_LTR LTR Gypsy 401 658 0 7 626 1055 0 8 0 chrUextra 5420518 5420633 -23584023 - DM1731_LTR LTR Copia -220 116 1 7 626 3155 82 13 22 chrUextra 5420633 5421082 -23583574 - IDEFIX_LTR LTR Gypsy -149 445 1 7 626 486 36 0 0 chrUextra 5421082 5421138 -23583518 - IDEFIX_I LTR Gypsy 0 5628 5573 7 626 5665 26 38 1 chrUextra 5421238 5422118 -23582538 - R1_DM LINE R1 -2054 3302 2391 7 626 3987 179 19 24 chrUextra 5422218 5423098 -23581558 + SAR_DM Satellite Satellite 355 1230 -242 7 626 830 40 10 0 chrUextra 5423198 5423299 -23581357 + TART LINE telomeric 10562 10663 -3814 7 626 459 80 77 39 chrUextra 5423297 5423375 -23581281 + TART LINE telomeric 10985 11065 -3412 7 626 3762 110 74 84 chrUextra 5423365 5424078 -23580578 + TART LINE telomeric 6985 7690 -6787 7 626 1620 0 0 0 chrUextra 5424181 5424361 -23580295 + (TTGTG)n Simple_repeat Simple_repeat 1 180 0 7 626 4718 2 0 0 chrUextra 5424369 5424875 -23579781 + TABOR_LTR LTR Gypsy 1 506 0 7 626 1557 0 11 6 chrUextra 5424875 5425058 -23579598 + TABOR_I LTR Gypsy 1 184 -6152 7 626 677 276 36 4 chrUextra 5425161 5425583 -23579073 + ROVER-I_DM LTR Gypsy 1371 1934 -4650 7 626 328 280 78 41 chrUextra 5425780 5426022 -23578634 - TV1I LTR Gypsy -4405 1558 1308 7 626 2097 64 7 3 chrUextra 5426138 5426434 -23578222 - I_DM LINE I -5836 395 99 7 626 4108 72 21 2 chrUextra 5426489 5427018 -23577638 + Baggins1 LINE LOA 4205 4743 -710 7 626 877 47 16 0 chrUextra 5427118 5427245 -23577411 - TLD2 Unknown Unknown -30 188 60 7 626 548 328 41 43 chrUextra 5427234 5427700 -23576956 - Gypsy4_I LTR Gypsy -3638 2650 2024 7 626 5142 173 32 0 chrUextra 5428098 5428977 -23575679 + TIRANT_I LTR Gypsy 2751 3657 -4035 7 626 5564 28 0 67 chrUextra 5429078 5429841 -23574815 - NINJA_I LTR Pao -5299 712 1 7 626 925 52 8 8 chrUextra 5429841 5429958 -23574698 - NINJA_LTR LTR Pao 0 317 201 7 626 21 89 0 0 chrUextra 5431542 5431598 -23573058 + AT_rich Low_complexity Low_complexity 1 56 0 7 626 29 47 0 0 chrUextra 5431636 5431679 -23572977 + AT_rich Low_complexity Low_complexity 1 43 0 7 626 28 71 0 0 chrUextra 5431723 5431779 -23572877 + AT_rich Low_complexity Low_complexity 1 56 0 7 626 7730 27 0 0 chrUextra 5432018 5432898 -23571758 + DIVER_I LTR Pao 3912 4791 -852 7 626 5591 21 15 1 chrUextra 5432998 5433669 -23570987 - R1_DM LINE R1 -4066 1290 611 7 626 559 82 0 0 chrUextra 5433805 5433878 -23570778 - DM176_I LTR Gypsy 0 6420 6348 7 626 3204 3 0 0 chrUextra 5433978 5434322 -23570334 - HOBO DNA hAT -2672 344 1 7 626 230 83 0 53 chrUextra 5434797 5434835 -23569821 + TRAM_LTR LTR Pao 273 308 -64 7 626 3840 32 76 1 chrUextra 5434958 5435748 -23568908 + R1_DM LINE R1 4506 5354 -2 7 626 369 108 15 15 chrUextra 5435772 5435838 -23568818 + R1_DM LINE R1 23 88 -5268 7 626 2482 72 6 40 chrUextra 5435938 5436814 -23567842 - DMSAT6 Satellite Satellite -65 845 1 7 626 432 157 0 0 chrUextra 5436918 5436988 -23567668 + ARS406_DM Unknown Unknown 120 189 -164 7 626 3472 179 64 31 chrUextra 5436926 5437795 -23566861 - SAR_DM Satellite Satellite -243 1229 332 7 626 6693 28 147 15 chrUextra 5437898 5438778 -23565878 + ACCORD2_I LTR Gypsy 4611 5606 -1606 7 626 2494 4 0 0 chrUextra 5438879 5439158 -23565498 - R2_DM LINE R2 -2824 783 505 7 626 5659 3 0 0 chrUextra 5439149 5439758 -23564898 - LSU-rRNA_Dme rRNA rRNA -1340 2560 1952 7 626 1464 0 0 0 chrUextra 5439858 5440021 -23564635 + ROO_I LTR Pao 8094 8256 0 7 626 3999 2 0 0 chrUextra 5440021 5440449 -23564207 + ROO_LTR LTR Pao 1 428 0 7 626 746 136 105 8 chrUextra 5440838 5440971 -23563685 - DMCR1A LINE CR1 -1244 3226 3081 7 626 1093 163 102 15 chrUextra 5441058 5441263 -23563393 + DMLTR5 LTR Gypsy 40 262 -4 7 626 2452 107 96 20 chrUextra 5441264 5441713 -23562943 + HMSBEAGLE_I LTR Gypsy 2 484 -6045 7 626 2559 87 39 10 chrUextra 5441818 5442696 -23561960 - DMSAT6 Satellite Satellite -98 903 1 7 626 3939 181 24 11 chrUextra 5442806 5443677 -23560979 - SAR_DM Satellite Satellite -396 1076 195 7 626 2348 18 0 14 chrUextra 5443778 5444066 -23560590 - STALKER4_LTR LTR Gypsy -118 284 1 7 626 2092 264 3 0 chrUextra 5444087 5444658 -23559998 - TOM_I LTR Gypsy -504 5608 5036 7 626 570 14 0 42 chrUextra 5444758 5444830 -23559826 - NTS_DM Other Other -147 93 25 7 626 1274 18 0 12 chrUextra 5444882 5445048 -23559608 - NTS_DM Other Other -39 201 38 7 626 907 9 0 27 chrUextra 5445048 5445160 -23559496 - NTS_DM Other Other -107 133 25 7 626 22 56 0 0 chrUextra 5445186 5445222 -23559434 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 269 125 0 0 chrUextra 5445235 5445275 -23559381 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 262 150 0 0 chrUextra 5445318 5445358 -23559298 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 262 150 0 0 chrUextra 5445410 5445450 -23559206 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 262 150 0 0 chrUextra 5445502 5445542 -23559114 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 22 56 0 0 chrUextra 5445547 5445583 -23559073 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 2082 183 9 5 chrUextra 5445738 5446494 -23558162 + SAR_DM Satellite Satellite 1 759 -535 7 626 812 62 0 0 chrUextra 5446505 5446618 -23558038 - ARS406_DM Unknown Unknown -189 164 52 7 626 3634 5 2 2 chrUextra 5446718 5447126 -23557530 - Invader1_LTR LTR Gypsy -15 408 1 7 626 3102 99 2 0 chrUextra 5447134 5447598 -23557058 - S_DM DNA Tc1 0 1736 1272 7 626 1072 107 54 33 chrUextra 5447706 5447890 -23556766 - TART LINE telomeric -10607 3870 3683 7 626 4171 82 22 55 chrUextra 5447885 5448571 -23556085 - TART LINE telomeric -11115 3362 2700 7 626 2453 97 5 36 chrUextra 5448678 5449558 -23555098 - DMSAT6 Satellite Satellite -37 852 1 7 626 256 0 0 0 chrUextra 5449658 5449687 -23554969 + R1_DM LINE R1 5328 5356 0 7 626 4830 62 16 15 chrUextra 5449722 5450538 -23554118 + R1_DM LINE R1 2 960 -4396 7 626 71 67 0 0 chrUextra 5450720 5450854 -23553802 + AT_rich Low_complexity Low_complexity 1 134 0 7 626 2740 172 15 17 chrUextra 5451618 5452498 -23552158 + SAR_DM Satellite Satellite 1 878 -577 7 626 860 109 0 0 chrUextra 5452599 5452727 -23551929 + ARS406_DM Unknown Unknown 62 189 -164 7 626 3300 204 21 26 chrUextra 5452624 5453478 -23551178 - SAR_DM Satellite Satellite -203 1269 420 7 626 919 139 90 0 chrUextra 5453578 5453744 -23550912 + TART LINE telomeric 3703 3883 -10594 7 626 4354 110 37 34 chrUextra 5453724 5454458 -23550198 + TART LINE telomeric 5323 6058 -8419 7 626 7785 10 0 5 chrUextra 5454558 5455438 -23549218 - FW_DM LINE Jockey -571 4121 3246 7 626 2766 119 119 0 chrUextra 5455538 5456043 -23548613 + Stalker2_I LTR Gypsy 3310 3874 -3528 7 626 24 32 0 0 chrUextra 5456061 5456092 -23548564 + AT_rich Low_complexity Low_complexity 1 31 0 7 626 255 215 11 151 chrUextra 5456121 5456214 -23548442 + DM176_LTR LTR Gypsy 190 269 -238 7 626 260 194 75 0 chrUextra 5456326 5456393 -23548263 + DM176_LTR LTR Gypsy 295 366 -141 7 626 642 44 0 32 chrUextra 5456518 5456612 -23548044 + QUASIMODO_I LTR Gypsy 1636 1726 -4334 7 626 4506 2 0 2 chrUextra 5456626 5457141 -23547515 + QUASIMODO_I LTR Gypsy 1709 2222 -3838 7 626 558 4 133 0 chrUextra 5457141 5457397 -23547259 + (TA)n Simple_repeat Simple_repeat 1 289 0 7 626 3665 113 52 92 chrUextra 5457500 5458290 -23546366 + PROTOP_B DNA P 396 1153 0 7 626 3012 237 34 31 chrUextra 5458476 5459354 -23545302 - ROVER-I_DM LTR Gypsy -4155 2429 1549 7 626 6449 23 22 0 chrUextra 5459455 5460227 -23544429 + Copia2_I LTR Copia 536 1324 -2838 7 626 810 57 0 0 chrUextra 5460229 5460334 -23544322 + Copia2_I LTR Copia 1628 1732 -2430 7 626 450 30 0 15 chrUextra 5460436 5460503 -23544153 + NTS_DM Other Other 136 201 -39 7 626 907 9 0 27 chrUextra 5460555 5460667 -23543989 + NTS_DM Other Other 25 133 -107 7 626 1304 18 0 6 chrUextra 5460667 5460832 -23543824 + NTS_DM Other Other 38 201 -39 7 626 907 9 0 27 chrUextra 5460884 5460996 -23543660 + NTS_DM Other Other 25 133 -107 7 626 1274 18 0 12 chrUextra 5460996 5461162 -23543494 + NTS_DM Other Other 38 201 -39 7 626 729 11 0 33 chrUextra 5461223 5461313 -23543343 + NTS_DM Other Other 25 111 -129 7 626 201 164 44 15 chrUextra 5461437 5461505 -23543151 + GA-rich Low_complexity Low_complexity 1 70 0 7 626 205 0 87 22 chrUextra 5461926 5461972 -23542684 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 626 1406 90 35 18 chrUextra 5461972 5462199 -23542457 + ROVER-LTR_DM LTR Gypsy 2 232 -135 7 626 3221 102 115 0 chrUextra 5462392 5462936 -23541720 - DMRT1B LINE R1 -1444 3739 3134 7 626 542 262 73 6 chrUextra 5462967 5463132 -23541524 + Gypsy12_I LTR Gypsy 3154 3329 -2217 7 626 442 35 18 0 chrUextra 5463371 5463428 -23541228 - DIVER_I LTR Pao -5585 58 1 7 626 1073 108 9 110 chrUextra 5463449 5463677 -23540979 - DIVER_LTR LTR Pao 0 224 20 7 626 4482 11 0 45 chrUextra 5463676 5464250 -23540406 + STALKER4_I LTR Gypsy 2725 3272 -3258 7 626 248 165 91 70 chrUextra 5464588 5464731 -23539925 + (CAAGA)n Simple_repeat Simple_repeat 3 148 0 7 626 364 217 106 0 chrUextra 5464848 5465009 -23539647 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 7 626 373 216 105 0 chrUextra 5464941 5465103 -23539553 + (CAGAA)n Simple_repeat Simple_repeat 1 179 0 7 626 345 201 107 0 chrUextra 5465016 5465227 -23539429 + (AATAG)n Simple_repeat Simple_repeat 1 233 0 7 626 2426 115 26 16 chrUextra 5465331 5466208 -23538448 + DMSAT6 Satellite Satellite 1 885 -1 7 626 5991 3 0 1 chrUextra 5466308 5466997 -23537659 - Copia_I LTR Copia -1079 3514 2827 7 626 1652 5 0 5 chrUextra 5467000 5467187 -23537469 - Copia_I LTR Copia -2466 2127 1942 7 626 2942 6 0 0 chrUextra 5467287 5467619 -23537037 - Copia2_I LTR Copia -3830 332 1 7 626 1761 0 0 0 chrUextra 5467622 5467819 -23536837 - Copia2_LTR_DM LTR Copia -1 197 1 7 626 2901 11 26 0 chrUextra 5467819 5468166 -23536490 - Copia2_I LTR Copia 0 4162 3807 7 626 7742 1 11 0 chrUextra 5468266 5469145 -23535511 + Stalker2_I LTR Gypsy 2430 3318 -4084 7 626 380 198 0 19 chrUextra 5469245 5469348 -23535308 + XDMR_DM Unknown Unknown 260 360 0 7 626 3839 183 6 17 chrUextra 5469262 5470124 -23534532 - SAR_DM Satellite Satellite -354 1118 267 7 626 458 0 0 0 chrUextra 5470224 5470274 -23534382 + MDG3_I LTR Gypsy 4937 4986 0 7 626 2396 4 0 0 chrUextra 5470274 5470541 -23534115 + MDG3_LTR LTR Gypsy 1 267 0 7 626 241 114 0 22 chrUextra 5470578 5470623 -23534033 - ROVER-I_DM LTR Gypsy -6390 194 151 7 626 201 74 0 0 chrUextra 5470648 5470675 -23533981 + (T)n Simple_repeat Simple_repeat 1 27 0 7 626 422 165 13 0 chrUextra 5470717 5470796 -23533860 - ROVER-I_DM LTR Gypsy -6504 80 1 7 626 1532 104 49 59 chrUextra 5470796 5471103 -23533553 - ROVER-LTR_DM LTR Gypsy 0 367 64 7 626 2748 3 0 0 chrUextra 5471203 5471531 -23533125 + DOC LINE Jockey 4398 4725 0 7 626 1135 154 14 28 chrUextra 5471553 5471767 -23532889 - Gypsy12_LTR LTR Gypsy -2125 211 1 7 626 2255 82 0 3 chrUextra 5471766 5472058 -23532598 - Gypsy12_I LTR Gypsy 0 5546 5256 7 626 229 0 0 0 chrUextra 5472056 5472082 -23532574 - Gypsy12_I LTR Gypsy -887 4659 4634 7 626 673 26 0 0 chrUextra 5472182 5472259 -23532397 - Baggins1 LINE LOA -62 5391 5315 7 626 1793 33 124 0 chrUextra 5472255 5472496 -23532160 - Baggins1 LINE LOA -456 4997 4727 7 626 27 29 0 0 chrUextra 5472735 5472769 -23531887 + AT_rich Low_complexity Low_complexity 1 34 0 7 626 809 29 10 0 chrUextra 5473161 5473264 -23531392 + G5A_DM LINE Jockey 2735 2838 -3 7 626 383 269 0 0 chrUextra 5473290 5473398 -23531258 - Gypsy7_I LTR Gypsy -3317 1667 1560 7 626 418 315 68 29 chrUextra 5473441 5473752 -23530904 - Gypsy7_I LTR Gypsy -3496 1488 1166 7 626 1631 31 0 5 chrUextra 5473848 5474040 -23530616 - PROTOP DNA P -1 4479 4289 7 626 3582 191 26 19 chrUextra 5474140 5475019 -23529637 - SAR_DM Satellite Satellite -315 1157 273 7 626 2321 73 3 68 chrUextra 5475119 5475487 -23529169 - Invader3_I LTR Gypsy -2989 1899 1556 7 626 2574 39 0 0 chrUextra 5475488 5475793 -23528863 - Invader3_I LTR Gypsy -4081 807 503 7 626 1776 25 0 0 chrUextra 5475795 5475998 -23528658 - Invader3_I LTR Gypsy -4680 208 6 7 626 3428 213 13 22 chrUextra 5476098 5476977 -23527679 + SAR_DM Satellite Satellite 1 870 -203 7 626 3994 177 8 13 chrUextra 5478062 5478933 -23525723 + SAR_DM Satellite Satellite 195 1061 -411 7 626 5318 44 75 0 chrUextra 5479114 5479914 -23524742 - DMCR1A LINE CR1 -3061 1409 550 7 626 7586 5 9 7 chrUextra 5480014 5480892 -23523764 + MAX_I LTR Pao 814 1693 -6221 7 626 7725 1 1 0 chrUextra 5480992 5481870 -23522786 + TABOR_I LTR Gypsy 2145 3023 -3313 7 626 2908 70 7 17 chrUextra 5482398 5482803 -23521853 - Baggins1 LINE LOA -262 5191 4791 7 626 2082 178 5 15 chrUextra 5482949 5483343 -23521313 + TAHRE LINE telomeric 9825 10214 -249 7 626 2226 34 3 82 chrUextra 5483926 5484244 -23520412 - LSU-rRNA_Dme rRNA rRNA -3606 294 2 7 626 28 79 0 0 chrUextra 5484257 5484320 -23520336 + AT_rich Low_complexity Low_complexity 1 63 0 7 626 22 56 0 0 chrUextra 5484535 5484571 -23520085 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 1158 140 2 0 chrUextra 5484914 5485327 -23519329 + (TA)n Simple_repeat Simple_repeat 1 413 0 7 626 1158 122 0 0 chrUextra 5485347 5485527 -23519129 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 626 2289 8 4 0 chrUextra 5485527 5485782 -23518874 - DMLTR5 LTR Gypsy 0 266 11 7 626 1355 6 0 18 chrUextra 5485886 5486051 -23518605 + NTS_DM Other Other 1 162 -78 7 626 513 103 39 0 chrUextra 5486167 5486245 -23518411 + NTS_DM Other Other 10 90 -150 7 626 4449 8 0 0 chrUextra 5486255 5486760 -23517896 + DM176_LTR LTR Gypsy 1 505 -2 7 626 2830 183 68 19 chrUextra 5486871 5487719 -23516937 - TART LINE telomeric -4827 9650 8957 7 626 536 169 23 125 chrUextra 5487840 5488016 -23516640 + FB4_DM DNA Tc1 912 1069 -3020 7 626 1154 147 80 35 chrUextra 5488070 5488359 -23516297 + FB4_DM DNA Tc1 2898 3199 -890 7 626 2621 83 9 40 chrUextra 5488816 5489694 -23514962 + DMSAT6 Satellite Satellite 1 850 -37 7 626 1436 130 121 16 chrUextra 5489863 5490226 -23514430 + DNAREP1_DM LINE Penelope 1 332 -262 7 626 984 125 54 0 chrUextra 5490228 5490396 -23514260 - DMCR1A LINE CR1 -171 4299 4123 7 626 334 226 275 7 chrUextra 5490419 5490557 -23514099 + Gypsy_I LTR Gypsy 1098 1272 -5235 7 626 3317 191 55 23 chrUextra 5490772 5491650 -23513006 - SAR_DM Satellite Satellite -269 1203 298 7 626 1443 294 22 18 chrUextra 5491753 5492336 -23512320 + MICROPIA_I LTR Gypsy 2393 2970 -1506 7 626 445 288 1 17 chrUextra 5492330 5492493 -23512163 + MICROPIA_I LTR Gypsy 1526 1655 -1531 7 626 452 231 128 40 chrUextra 5492476 5492625 -23512031 + MICROPIA_I LTR Gypsy 3145 3306 -1170 7 626 2788 50 0 3 chrUextra 5492728 5493070 -23511586 + BATUMI_I LTR Pao 3741 4081 -3882 7 626 4538 35 0 0 chrUextra 5493066 5493606 -23511050 + BATUMI_I LTR Pao 4585 5124 -2839 7 626 1470 29 0 0 chrUextra 5493706 5493914 -23510742 + (TATAA)n Simple_repeat Simple_repeat 1 208 0 7 626 1136 100 0 16 chrUextra 5493936 5494119 -23510537 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 7 626 1405 28 11 0 chrUextra 5494138 5494316 -23510340 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 7 626 1533 26 0 0 chrUextra 5494316 5494584 -23510072 + (TATAA)n Simple_repeat Simple_repeat 1 268 0 7 626 614 0 0 0 chrUextra 5494684 5494758 -23509898 + DM1731_I LTR Copia 3903 3976 0 7 626 2788 39 0 0 chrUextra 5494758 5495094 -23509562 + DM1731_LTR LTR Copia 1 336 0 7 626 1873 191 47 9 chrUextra 5495098 5495562 -23509094 - SAR_DM Satellite Satellite -658 814 333 7 626 2517 92 40 16 chrUextra 5495705 5496540 -23508116 + DMSAT6 Satellite Satellite 1 855 -3 7 626 1605 48 35 9 chrUextra 5496640 5496869 -23507787 - IDEFIX_LTR LTR Gypsy -357 237 3 7 626 415 151 86 0 chrUextra 5497049 5497142 -23507514 + DNAREP1_DM LINE Penelope 182 282 -312 7 626 344 87 0 0 chrUextra 5497168 5497214 -23507442 + DNAREP1_DM LINE Penelope 350 395 -199 7 626 500 176 15 15 chrUextra 5497253 5497386 -23507270 - PROTOP_B DNA P -705 448 316 7 626 7506 16 2 0 chrUextra 5497618 5498496 -23506160 + STALKER4_I LTR Gypsy 1868 2747 -3783 7 626 2144 176 11 9 chrUextra 5498601 5499064 -23505592 - SAR_DM Satellite Satellite -396 1076 613 7 626 232 108 0 0 chrUextra 5499032 5499069 -23505587 + ARS406_DM Unknown Unknown 1 37 -316 7 626 2009 157 8 10 chrUextra 5499082 5499474 -23505182 - SAR_DM Satellite Satellite -439 1033 643 7 626 1336 47 47 10 chrUextra 5499574 5499766 -23504890 - ROVER-LTR_DM LTR Gypsy -168 199 1 7 626 239 160 264 57 chrUextra 5499766 5499857 -23504799 + STALKER4_LTR LTR Gypsy 261 373 -29 7 626 535 47 22 56 chrUextra 5499910 5500000 -23504656 + STALKER4_I LTR Gypsy 17 103 -6427 7 626 2697 135 9 16 chrUextra 5500000 5500452 -23504204 + STALKER4_I LTR Gypsy 148 596 -5934 7 626 781 0 0 0 chrUextra 5500552 5500636 -23504020 - MICROPIA_I LTR Gypsy -4392 84 1 7 626 3249 11 2 75 chrUextra 5500636 5501050 -23503606 - MICROPIA_LTR LTR Gypsy 0 476 93 7 626 1753 33 191 0 chrUextra 5501053 5501113 -23503543 + ACCORD2_I LTR Gypsy 1081 1140 -6072 7 626 255 79 0 0 chrUextra 5501113 5501151 -23503505 + (TAA)n Simple_repeat Simple_repeat 2 39 0 7 626 1753 33 191 0 chrUextra 5501151 5501331 -23503325 + ACCORD2_I LTR Gypsy 1141 1366 -5846 7 626 1301 82 18 0 chrUextra 5501530 5501700 -23502956 - DIVER2_I LTR Pao -256 3891 3719 7 626 5392 47 0 33 chrUextra 5501677 5502375 -23502281 - DIVER2_I LTR Pao -2572 1575 901 7 626 2379 24 0 16 chrUextra 5502515 5502818 -23501838 - NINJA_I LTR Pao -5713 298 1 7 626 2524 44 3 28 chrUextra 5502818 5503143 -23501513 - NINJA_LTR LTR Pao 0 317 1 7 626 1014 100 21 32 chrUextra 5503162 5503348 -23501308 + ACCORD2_I LTR Gypsy 1543 1726 -5486 7 626 6783 39 1 32 chrUextra 5503486 5504364 -23500292 - R1_DM LINE R1 -4085 1271 421 7 78 7182 31 33 12 chrUextra 5504465 5505342 -23499314 - DMCR1A LINE CR1 -1540 2930 2036 7 627 2889 62 5 30 chrUextra 5505442 5505844 -23498812 - ROO_I LTR Pao -7751 505 114 7 627 3574 36 17 2 chrUextra 5505877 5506299 -23498357 - ROO_LTR LTR Pao 0 428 1 7 627 7130 26 0 0 chrUextra 5506420 5507222 -23497434 + DIVER_I LTR Pao 4842 5643 0 7 627 567 67 0 13 chrUextra 5507222 5507298 -23497358 + DIVER_LTR LTR Pao 1 75 -149 7 627 3601 14 0 0 chrUextra 5507398 5507827 -23496829 + DM176_I LTR Gypsy 5992 6420 0 7 627 3492 21 42 33 chrUextra 5507827 5508276 -23496380 + DM176_LTR LTR Gypsy 1 453 -54 7 627 271 266 45 45 chrUextra 5508377 5508536 -23496120 - DM176_I LTR Gypsy -3724 2696 2641 7 627 2131 51 78 81 chrUextra 5508477 5508798 -23495858 - CIRCE LINE Composite -5064 1292 973 7 627 2538 64 0 0 chrUextra 5508940 5509252 -23495404 - CIRCE LINE Composite -5386 970 659 7 627 3341 133 57 43 chrUextra 5509354 5510230 -23494426 + STALKER4_I LTR Gypsy 292 1246 -5284 7 627 4117 25 0 0 chrUextra 5510332 5510807 -23493849 + FW_DM LINE Jockey 289 763 -3929 7 627 3610 7 0 10 chrUextra 5510801 5511210 -23493446 + FW_DM LINE Jockey 1828 2232 -2460 7 627 2426 120 9 39 chrUextra 5512288 5513162 -23491494 + DMSAT6 Satellite Satellite 1 847 -97 7 627 1222 0 0 12 chrUextra 5514248 5514411 -23490245 + BLOOD_I LTR Gypsy 6453 6613 0 7 627 3725 0 0 5 chrUextra 5514411 5514812 -23489844 + BLOOD_LTR LTR Gypsy 1 399 0 7 627 896 44 9 0 chrUextra 5514812 5514911 -23489745 + DM297_I LTR Gypsy 1993 2092 -4075 7 627 1847 9 0 0 chrUextra 5514906 5515122 -23489534 + DM297_I LTR Gypsy 5926 6141 -26 7 627 1919 0 0 0 chrUextra 5515222 5515426 -23489230 + LSU-rRNA_Dme rRNA rRNA 2443 2646 -1254 7 627 3608 0 0 0 chrUextra 5515436 5515827 -23488829 + R1_DM LINE R1 4966 5356 0 7 627 2427 0 0 4 chrUextra 5515830 5516100 -23488556 + R1_DM LINE R1 2994 3262 -2094 7 627 2144 157 22 5 chrUextra 5516200 5516609 -23488047 - SAR_DM Satellite Satellite -680 792 377 7 627 2176 35 3 31 chrUextra 5516605 5516896 -23487760 + BATUMI_I LTR Pao 7002 7284 -679 7 627 1387 61 6 6 chrUextra 5516896 5517078 -23487578 + BATUMI_I LTR Pao 1 182 -7781 7 627 3840 181 13 20 chrUextra 5517195 5518056 -23486600 + SAR_DM Satellite Satellite 326 1180 -292 7 627 21 57 0 0 chrUextra 5518482 5518517 -23486139 + AT_rich Low_complexity Low_complexity 1 35 0 7 627 6759 49 11 22 chrUextra 5519134 5520012 -23484644 + R1_DM LINE R1 525 1393 -3963 7 627 7735 2 0 17 chrUextra 5520112 5520990 -23483666 - DM412 LTR Gypsy -3473 3424 2562 7 627 457 37 0 0 chrUextra 5521913 5521967 -23482689 - MAX_I LTR Pao -3882 4032 3979 7 627 195 114 0 0 chrUextra 5522909 5522944 -23481712 + (TA)n Simple_repeat Simple_repeat 1 35 0 7 627 725 209 6 19 chrUextra 5523427 5523583 -23481073 - HETRP_DM Satellite Satellite -190 1682 1529 7 627 7427 30 0 9 chrUextra 5524021 5524898 -23479758 - R1_DM LINE R1 -3144 2212 1344 7 627 2405 130 97 42 chrUextra 5524998 5525508 -23479148 + BATUMI_I LTR Pao 100 641 -7322 7 627 3259 3 0 3 chrUextra 5525508 5525875 -23478781 + QUASIMODO_LTR LTR Gypsy 1 366 -292 7 627 3510 194 12 16 chrUextra 5525983 5526852 -23477804 - SAR_DM Satellite Satellite -514 865 1 7 627 2599 87 13 2 chrUextra 5526953 5527346 -23477310 + MDG1_I LTR Gypsy 741 1137 -5459 7 627 1383 7 0 0 chrUextra 5527409 5527560 -23477096 - Invader2_LTR LTR Gypsy 0 266 116 7 627 2242 4 0 0 chrUextra 5527561 5527829 -23476827 - Invader2_I LTR Gypsy -219 4373 4106 7 627 534 0 0 0 chrUextra 5527929 5527993 -23476663 + TABOR_I LTR Gypsy 6273 6336 0 7 627 4742 0 0 0 chrUextra 5527991 5528497 -23476159 + TABOR_LTR LTR Gypsy 1 506 0 7 627 1024 42 0 40 chrUextra 5528497 5528619 -23476037 + STALKER4_I LTR Gypsy 6415 6530 0 7 627 1638 5 0 5 chrUextra 5528619 5528806 -23475850 + STALKER4_LTR LTR Gypsy 1 186 -216 7 627 3846 251 6 9 chrUextra 5528906 5529782 -23474874 - Gypsy2_I LTR Gypsy -3548 2587 1715 7 627 1971 8 17 13 chrUextra 5529897 5530136 -23474520 - NTS_DM Other Other 0 240 1 7 627 5266 3 0 0 chrUextra 5530186 5530760 -23473896 - R1_DM LINE R1 -775 4581 4008 7 627 7901 15 12 0 chrUextra 5530860 5531737 -23472919 - Invader1_I LTR Gypsy -1552 1634 747 7 627 267 215 11 151 chrUextra 5531867 5531960 -23472696 - DM176_LTR LTR Gypsy -238 269 190 7 627 2715 66 19 8 chrUextra 5532012 5532377 -23472279 - MDG1_I LTR Gypsy -827 5769 5401 7 627 2476 58 36 6 chrUextra 5532383 5532714 -23471942 - DM297_I LTR Gypsy -1816 4351 4011 7 627 3818 181 15 21 chrUextra 5532814 5533668 -23470988 + SAR_DM Satellite Satellite 333 1181 -291 7 627 251 81 27 0 chrUextra 5533654 5533691 -23470965 - ARS406_DM Unknown Unknown -164 189 152 7 627 1164 276 26 34 chrUextra 5533792 5534300 -23470356 - ROVER-I_DM LTR Gypsy -5362 1222 392 7 627 211 291 8 23 chrUextra 5534462 5534592 -23470064 + (TTTA)n Simple_repeat Simple_repeat 2 129 0 7 627 7455 35 7 6 chrUextra 5534768 5535645 -23469011 + BATUMI_I LTR Pao 5470 6347 -1616 7 627 3392 199 53 17 chrUextra 5535745 5536609 -23468047 + SAR_DM Satellite Satellite 375 1269 -203 7 627 811 112 0 0 chrUextra 5536506 5536622 -23468034 - ARS406_DM Unknown Unknown -164 189 74 7 627 3524 202 35 8 chrUextra 5536723 5537582 -23467074 + SAR_DM Satellite Satellite 195 1076 -396 7 627 1006 324 50 49 chrUextra 5537705 5537893 -23466763 + Gypsy4_I LTR Gypsy 2431 2679 -3609 7 627 1771 9 9 0 chrUextra 5537893 5538109 -23466547 + TLD2 Unknown Unknown 1 218 0 7 627 1006 324 50 49 chrUextra 5538109 5538576 -23466080 + Gypsy4_I LTR Gypsy 2680 3302 -2986 7 627 3563 152 51 55 chrUextra 5538676 5539553 -23465103 - HETA LINE telomeric -381 5700 4956 7 627 2015 320 26 18 chrUextra 5539714 5540530 -23464126 + MICROPIA_I LTR Gypsy 1999 2820 -1656 7 627 4346 26 4 0 chrUextra 5540630 5541133 -23463523 + R1_DM LINE R1 4194 4698 -658 7 627 1818 24 14 0 chrUextra 5541137 5541349 -23463307 + R1_DM LINE R1 5142 5356 0 7 627 924 80 8 0 chrUextra 5541382 5541507 -23463149 + R1_DM LINE R1 1 126 -5230 7 627 5517 82 47 26 chrUextra 5541608 5542484 -23462172 + STALKER4_I LTR Gypsy 634 1527 -5003 7 627 2623 6 0 90 chrUextra 5542584 5542928 -23461728 + MICROPIA_LTR LTR Gypsy 164 476 0 7 627 2511 15 99 0 chrUextra 5542928 5543461 -23461195 + MICROPIA_I LTR Gypsy 1 586 -3890 7 627 3675 5 0 2 chrUextra 5543578 5543981 -23460675 + STALKER4_LTR LTR Gypsy 1 402 0 7 627 230 61 0 29 chrUextra 5543981 5544015 -23460641 + STALKER4_I LTR Gypsy 1 33 -6497 7 627 493 179 0 0 chrUextra 5544538 5544622 -23460034 - HETRP_DM Satellite Satellite -260 1612 1529 7 627 740 216 6 19 chrUextra 5544785 5544941 -23459715 - HETRP_DM Satellite Satellite -190 1682 1529 7 627 758 203 51 92 chrUextra 5545094 5545311 -23459345 - HETRP_DM Satellite Satellite -190 1682 1475 7 627 1797 34 0 4 chrUextra 5545516 5545754 -23458902 + QUASIMODO_I LTR Gypsy 5491 5727 -333 7 627 2746 119 18 38 chrUextra 5545797 5546297 -23458359 + QUASIMODO_LTR LTR Gypsy 26 658 0 7 627 4121 102 97 82 chrUextra 5546492 5547369 -23457287 - PROTOP_B DNA P -174 979 90 7 627 190 0 67 0 chrUextra 5547814 5547844 -23456812 + (TA)n Simple_repeat Simple_repeat 1 32 0 7 627 3078 28 42 0 chrUextra 5547986 5548346 -23456310 + PROTOP DNA P 1 375 -4105 7 627 249 222 27 27 chrUextra 5549169 5549243 -23455413 - Gypsy4_I LTR Gypsy -1891 4397 4324 7 627 328 55 365 14 chrUextra 5549430 5549504 -23455152 - DM297_LTR LTR Gypsy -314 100 1 7 627 22 88 0 0 chrUextra 5549540 5549597 -23455059 + AT_rich Low_complexity Low_complexity 1 57 0 7 627 23 68 0 0 chrUextra 5549881 5549925 -23454731 + AT_rich Low_complexity Low_complexity 1 44 0 7 627 25 65 0 0 chrUextra 5550125 5550171 -23454485 + AT_rich Low_complexity Low_complexity 1 46 0 7 627 648 39 0 0 chrUextra 5550191 5550268 -23454388 + TRANSIB2 DNA Transib 441 517 -2327 7 627 283 29 0 0 chrUextra 5550266 5550300 -23454356 + TRANSIB2 DNA Transib 840 873 -1971 7 627 2544 96 32 26 chrUextra 5550400 5551277 -23453379 - DMSAT6 Satellite Satellite -24 882 1 7 627 1344 17 22 22 chrUextra 5551377 5551561 -23453095 + NTS_DM Other Other 57 240 0 7 627 761 40 61 0 chrUextra 5551561 5551643 -23453013 + NTS_DM Other Other 1 88 -152 7 627 1909 129 66 69 chrUextra 5551643 5552051 -23452605 - Gypsy6_LTR LTR Gypsy 0 407 1 7 627 1215 6 25 19 chrUextra 5552051 5552212 -23452444 + NTS_DM Other Other 79 240 0 7 627 392 0 0 0 chrUextra 5552212 5552254 -23452402 + NTS_DM Other Other 1 42 -198 7 627 2379 19 0 0 chrUextra 5552354 5552625 -23452031 + G5_DM LINE Jockey 2816 3086 -1770 7 627 3900 25 0 0 chrUextra 5552622 5553070 -23451586 + G5_DM LINE Jockey 2699 3146 -1710 7 627 1484 6 0 0 chrUextra 5553070 5553230 -23451426 - FW_DM LINE Jockey -360 4332 4173 7 627 3971 189 7 8 chrUextra 5553347 5554206 -23450450 - SAR_DM Satellite Satellite -396 1076 219 7 627 460 321 0 0 chrUextra 5554307 5554491 -23450165 - OSVALDO_I LTR Gypsy -3929 2724 2541 7 627 411 303 45 0 chrUextra 5554529 5554661 -23449995 - OSVALDO_I LTR Gypsy -4172 2481 2344 7 627 457 298 145 0 chrUextra 5554680 5554928 -23449728 - OSVALDO_I LTR Gypsy -4464 2189 1906 7 627 332 137 173 27 chrUextra 5554926 5555001 -23449655 - Gypsy8_I LTR Gypsy -3330 1017 932 7 627 1446 78 16 0 chrUextra 5554990 5555182 -23449474 - Gypsy8_I LTR Gypsy -3867 480 286 7 627 240 149 203 0 chrUextra 5555286 5555360 -23449296 + Invader1_I LTR Gypsy 1063 1151 -2035 7 627 1909 307 10 53 chrUextra 5555343 5556158 -23448498 + MICROPIA_I LTR Gypsy 1682 2461 -2015 7 627 7791 17 7 1 chrUextra 5556258 5557134 -23447522 - BATUMI_I LTR Pao -2233 5730 4850 7 627 1988 48 10 0 chrUextra 5557234 5557617 -23447039 - DMCR1A LINE CR1 -149 4321 3896 7 627 709 242 114 55 chrUextra 5557617 5558110 -23446546 + DM297_I LTR Gypsy 92 613 -5554 7 627 3518 196 11 19 chrUextra 5558210 5559086 -23445570 - SAR_DM Satellite Satellite -471 869 1 7 627 479 122 100 0 chrUextra 5559673 5559763 -23444893 + DNAREP1_DM LINE Penelope 496 594 0 7 627 33 25 0 0 chrUextra 5559817 5559857 -23444799 + AT_rich Low_complexity Low_complexity 1 40 0 7 627 1098 0 0 8 chrUextra 5560909 5561038 -23443618 + Invader4_LTR LTR Gypsy 1 128 -218 7 627 22 0 0 0 chrUextra 5561849 5561871 -23442785 + AT_rich Low_complexity Low_complexity 1 22 0 7 627 583 65 0 0 chrUextra 5561937 5562014 -23442642 - NINJA_LTR LTR Pao 0 317 241 7 627 2484 291 8 8 chrUextra 5562114 5562980 -23441676 - TIRANT_I LTR Gypsy -3672 4020 3155 7 627 2852 30 0 0 chrUextra 5563090 5563455 -23441201 - QUASIMODO_I LTR Gypsy -4628 1432 1068 7 627 4000 8 37 0 chrUextra 5563453 5563966 -23440690 + QUASIMODO_I LTR Gypsy 3500 4031 -2029 7 627 2368 108 31 24 chrUextra 5564066 5564942 -23439714 - DMSAT6 Satellite Satellite -266 882 1 7 627 46 0 0 0 chrUextra 5565182 5565228 -23439428 + AT_rich Low_complexity Low_complexity 1 46 0 7 627 1076 20 0 0 chrUextra 5566018 5566164 -23438492 - QUASIMODO_I LTR Gypsy -422 5638 5493 7 627 983 68 34 0 chrUextra 5566175 5566322 -23438334 - QUASIMODO_I LTR Gypsy -885 5175 5024 7 627 1699 0 0 0 chrUextra 5566322 5566520 -23438136 - Copia2_LTR_DM LTR Copia 0 198 1 7 627 2035 16 0 0 chrUextra 5566520 5566778 -23437878 - Copia2_I LTR Copia 0 4162 3905 7 627 976 24 8 0 chrUextra 5566770 5566894 -23437762 - Copia2_I LTR Copia -1572 2590 2466 7 627 2471 23 0 0 chrUextra 5566994 5567294 -23437362 + R1_DM LINE R1 3950 4249 -1107 7 627 4296 31 74 0 chrUextra 5567289 5567869 -23436787 + R1_DM LINE R1 458 1080 -4276 7 627 5546 5 0 5 chrUextra 5567969 5568622 -23436034 - G2_DM LINE Jockey -1366 1736 1087 7 627 1076 7 26 19 chrUextra 5568619 5568775 -23435881 + NTS_DM Other Other 83 239 -1 7 627 565 15 0 0 chrUextra 5568777 5568844 -23435812 + NTS_DM Other Other 1 67 -173 7 627 2393 94 15 15 chrUextra 5568944 5569816 -23434840 - DMSAT6 Satellite Satellite -72 871 1 7 627 21 89 0 0 chrUextra 5569976 5570032 -23434624 + AT_rich Low_complexity Low_complexity 1 56 0 7 627 2878 171 14 9 chrUextra 5570896 5571766 -23432890 - SAR_DM Satellite Satellite -593 873 1 7 627 3152 102 41 26 chrUextra 5571869 5572744 -23431912 + TART LINE telomeric 4827 6270 -8207 7 627 3336 184 16 25 chrUextra 5572848 5573717 -23430939 - SAR_DM Satellite Satellite -313 1159 299 7 627 5201 67 17 3 chrUextra 5573859 5574582 -23430074 + R1_DM LINE R1 1 733 -4623 7 627 863 69 0 0 chrUextra 5574578 5574694 -23429962 + R1_DM LINE R1 1224 1339 -4017 7 627 4661 11 0 33 chrUextra 5574794 5575375 -23429281 + Gypsy12_LTR LTR Gypsy 1775 2336 0 7 627 2259 34 0 7 chrUextra 5575375 5575668 -23428988 + Gypsy12_I LTR Gypsy 1 291 -5255 7 627 3968 88 10 5 chrUextra 5575769 5576376 -23428280 + IDEFIX_I LTR Gypsy 3308 3917 -1711 7 627 1767 64 29 25 chrUextra 5576370 5576644 -23428012 + IDEFIX_I LTR Gypsy 4192 4466 -1162 7 627 1396 18 0 0 chrUextra 5576744 5576910 -23427746 - PROTOP_A DNA P -939 166 1 7 627 396 205 287 18 chrUextra 5577065 5577229 -23427427 - DNAREP1_DM LINE Penelope -176 418 211 7 627 648 113 204 0 chrUextra 5577242 5577384 -23427272 - DNAREP1_DM LINE Penelope -423 171 1 7 627 2897 0 0 0 chrUextra 5577719 5578053 -23426603 - MICROPIA_I LTR Gypsy -315 4161 3828 7 627 4623 6 0 7 chrUextra 5578052 5578593 -23426063 - MICROPIA_I LTR Gypsy -986 3490 2954 7 627 3045 188 91 26 chrUextra 5578694 5579569 -23425087 + Gypsy12_LTR LTR Gypsy 1327 2258 -78 7 627 1620 0 0 0 chrUextra 5579669 5579981 -23424675 + (GAGAA)n Simple_repeat Simple_repeat 1 312 0 7 627 7542 1 2 2 chrUextra 5580644 5581519 -23423137 + SSU-rRNA_Dme rRNA rRNA 928 1802 -193 7 627 23 68 0 0 chrUextra 5582324 5582368 -23422288 + AT_rich Low_complexity Low_complexity 1 44 0 7 627 26 30 0 0 chrUextra 5582414 5582447 -23422209 + AT_rich Low_complexity Low_complexity 1 33 0 7 627 7527 2 16 1 chrUextra 5582594 5583469 -23421187 - R2_DM LINE R2 -1212 2395 1508 7 627 1159 12 175 0 chrUextra 5583569 5583735 -23420921 - IDEFIX_LTR LTR Gypsy -399 195 1 7 627 1992 62 0 7 chrUextra 5583736 5584029 -23420627 - IDEFIX_I LTR Gypsy -2 5626 5336 7 627 3134 34 5 7 chrUextra 5584003 5584444 -23420212 - IDEFIX_I LTR Gypsy -407 5221 4782 7 627 1158 121 0 0 chrUextra 5585071 5585294 -23419362 + (TA)n Simple_repeat Simple_repeat 1 223 0 7 627 1004 8 0 0 chrUextra 5585295 5585418 -23419238 + DM176_LTR LTR Gypsy 1 123 -384 7 627 193 0 94 0 chrUextra 5586686 5586718 -23417938 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7 627 2056 135 115 17 chrUextra 5586908 5587369 -23417287 - DM297_I LTR Gypsy -1136 5031 4526 7 627 1459 193 15 11 chrUextra 5587541 5588343 -23416313 + SAR_DM Satellite Satellite 1 804 -645 7 627 868 83 6 17 chrUextra 5588444 5589065 -23415591 - RSP Satellite Satellite -78 614 1 7 627 644 88 51 19 chrUextra 5589091 5589317 -23415339 - RSP Satellite Satellite 0 233 1 7 627 2141 115 98 37 chrUextra 5589445 5590138 -23414518 + Gypsy12_I LTR Gypsy 171 976 -4570 7 627 388 268 8 0 chrUextra 5590145 5590272 -23414384 + DM297_I LTR Gypsy 3337 3464 -2703 7 627 2887 3 3 3 chrUextra 5590394 5590737 -23413919 - R1_DM LINE R1 -1476 3880 3538 7 627 4639 2 0 0 chrUextra 5590738 5591269 -23413387 - LSU-rRNA_Dme rRNA rRNA -1305 2595 2065 7 627 1604 70 126 0 chrUextra 5591450 5591830 -23412826 - PROTOP DNA P -1279 3201 2774 7 627 3163 38 0 2 chrUextra 5591831 5592231 -23412425 + STALKER4_LTR LTR Gypsy 1 399 -3 7 627 633 25 0 0 chrUextra 5592351 5592431 -23412225 - ARS406_DM Unknown Unknown -184 169 90 7 627 2958 201 13 32 chrUextra 5592430 5593218 -23411438 + SAR_DM Satellite Satellite 1 773 -208 7 627 302 259 81 19 chrUextra 5593628 5593789 -23410867 + QUASIMODO_I LTR Gypsy 1315 1485 -4575 7 627 824 253 51 0 chrUextra 5593932 5594189 -23410467 + QUASIMODO_I LTR Gypsy 1815 2084 -3976 7 627 1356 65 2 3 chrUextra 5594296 5594880 -23409776 + (ATAAG)n Simple_repeat Simple_repeat 1 583 0 7 627 1350 45 0 0 chrUextra 5594892 5595070 -23409586 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 7 627 505 28 0 27 chrUextra 5595095 5595168 -23409488 + (ATAAG)n Simple_repeat Simple_repeat 5 75 0 7 627 21 0 0 0 chrUextra 5595447 5595468 -23409188 + AT_rich Low_complexity Low_complexity 1 21 0 7 627 262 31 0 0 chrUextra 5595484 5595516 -23409140 - NTS_DM Other Other -207 33 2 7 627 6689 9 7 11 chrUextra 5596242 5597116 -23407540 + MAX_I LTR Pao 337 1206 -6708 7 627 4628 2 0 0 chrUextra 5597216 5597756 -23406900 + FW_DM LINE Jockey 4153 4692 0 7 627 2737 9 0 6 chrUextra 5597765 5598090 -23406566 - Gypsy2_LTR LTR Gypsy 0 353 31 7 627 4942 45 84 39 chrUextra 5598295 5599064 -23405592 - TRANSIB2 DNA Transib -624 2220 1417 7 627 3778 173 9 8 chrUextra 5599191 5600037 -23404619 - SAR_DM Satellite Satellite -396 1076 230 7 627 7012 36 6 1 chrUextra 5600140 5601012 -23403644 - Baggins1 LINE LOA -3285 2168 1293 7 627 1737 302 24 17 chrUextra 5601112 5601867 -23402789 + Invader1_I LTR Gypsy 1810 2569 -617 7 627 2308 11 0 0 chrUextra 5602086 5602362 -23402294 - FW_DM LINE Jockey -1438 3254 2979 7 627 2313 84 55 30 chrUextra 5602372 5602957 -23401699 + DMSAT6 Satellite Satellite 1 599 0 7 627 253 0 0 0 chrUextra 5603060 5603090 -23401566 + ACCORD2_I LTR Gypsy 1055 1084 -6128 7 627 3844 11 0 61 chrUextra 5603090 5603597 -23401059 - MICROPIA_LTR LTR Gypsy 0 476 1 7 627 2722 12 0 3 chrUextra 5603597 5603934 -23400722 - MICROPIA_I LTR Gypsy 0 4476 4141 7 627 1958 33 0 0 chrUextra 5604034 5604278 -23400378 + R1_DM LINE R1 1418 1661 -3695 7 627 5230 30 0 0 chrUextra 5604265 5604908 -23399748 + R1_DM LINE R1 1907 2549 -2807 7 627 4288 2 0 0 chrUextra 5605008 5605539 -23399117 + DOC6_DM LINE Jockey 3692 4222 0 7 627 26 30 0 0 chrUextra 5605633 5605666 -23398990 + AT_rich Low_complexity Low_complexity 1 33 0 7 627 58 15 0 0 chrUextra 5606079 5606144 -23398512 + AT_rich Low_complexity Low_complexity 1 65 0 7 627 58 15 0 0 chrUextra 5606625 5606690 -23397966 + AT_rich Low_complexity Low_complexity 1 65 0 7 627 3542 178 19 18 chrUextra 5606957 5607827 -23396829 + SAR_DM Satellite Satellite 252 1122 -350 7 627 1933 0 8 21 chrUextra 5607933 5608171 -23396485 + DM1731_I LTR Copia 3742 3976 0 7 627 2537 34 34 0 chrUextra 5608171 5608496 -23396160 + DM1731_LTR LTR Copia 1 336 0 7 627 246 98 0 0 chrUextra 5608496 5608537 -23396119 - TART LINE telomeric -6226 8251 8211 7 627 606 198 44 25 chrUextra 5608524 5608722 -23395934 - TART LINE telomeric -4935 9542 9364 7 627 189 0 0 0 chrUextra 5608757 5608778 -23395878 + (T)n Simple_repeat Simple_repeat 1 21 0 7 627 4163 0 0 2 chrUextra 5608904 5609392 -23395264 + DM176_I LTR Gypsy 2422 2908 -3512 7 627 238 132 19 19 chrUextra 5609419 5609473 -23395183 + (TTA)n Simple_repeat Simple_repeat 1 54 0 7 627 21 89 0 0 chrUextra 5610623 5610679 -23393977 + AT_rich Low_complexity Low_complexity 1 56 0 7 627 5323 32 17 1 chrUextra 5610852 5611547 -23393109 - PROTOP DNA P -3774 706 1 7 627 701 100 322 25 chrUextra 5611566 5611724 -23392932 - DNAREP1_DM LINE Penelope 0 594 390 7 627 1953 105 11 28 chrUextra 5611826 5612200 -23392456 + BATUMI_I LTR Pao 7430 7963 0 7 627 1630 67 4 62 chrUextra 5612222 5612478 -23392178 + BATUMI_LTR LTR Pao 32 272 0 7 627 1861 22 5 0 chrUextra 5612478 5612700 -23391956 + DMCR1A LINE CR1 4203 4425 -45 7 627 790 132 0 0 chrUextra 5612800 5612921 -23391735 + DM176_I LTR Gypsy 6300 6420 0 7 627 2139 63 31 19 chrUextra 5613057 5613447 -23391209 + R1_DM LINE R1 611 1294 -4062 7 627 2004 31 0 0 chrUextra 5613445 5613674 -23390982 + R1_DM LINE R1 1607 1835 -3521 7 627 3682 189 29 11 chrUextra 5613780 5614647 -23390009 - SAR_DM Satellite Satellite -396 1076 195 7 627 7899 5 10 0 chrUextra 5614748 5615620 -23389036 + Invader2_I LTR Gypsy 603 1483 -3109 7 627 7262 38 16 1 chrUextra 5615722 5616596 -23388060 - R1_DM LINE R1 -3554 1802 916 7 627 2435 165 45 45 chrUextra 5616698 5618544 -23386112 + DMSAT6 Satellite Satellite 1 1846 -57 7 627 1816 213 82 14 chrUextra 5618681 5619185 -23385471 - Gypsy3_I LTR Gypsy -5052 1960 1176 7 627 326 296 84 103 chrUextra 5619199 5619511 -23385145 - Gypsy6_I LTR Gypsy -4867 1268 987 7 627 2549 84 33 24 chrUextra 5619619 5620490 -23384166 + DMSAT6 Satellite Satellite 1 878 -6 7 627 3002 29 8 0 chrUextra 5620592 5620943 -23383713 + ACCORD2_I LTR Gypsy 731 1084 -6128 7 627 3988 13 2 81 chrUextra 5620943 5621460 -23383196 - MICROPIA_LTR LTR Gypsy 0 476 1 7 627 3277 35 195 1 chrUextra 5621566 5622302 -23382354 - IDEFIX_I LTR Gypsy -4145 1483 606 7 627 884 72 0 16 chrUextra 5622313 5622440 -23382216 - IDEFIX_I LTR Gypsy -5142 486 362 7 627 384 107 0 0 chrUextra 5623173 5623229 -23381427 - DNAREP1_DM LINE Penelope -153 441 386 7 627 2522 107 23 7 chrUextra 5623543 5624388 -23380268 - DMSAT6 Satellite Satellite -5 858 1 7 627 276 59 0 0 chrUextra 5624489 5624523 -23380133 - Gypsy12_I LTR Gypsy -4150 1396 1363 7 627 4462 101 75 45 chrUextra 5624525 5625297 -23379359 - Gypsy12_I LTR Gypsy -4751 795 1 7 627 335 154 62 0 chrUextra 5625297 5625362 -23379294 - Gypsy12_LTR LTR Gypsy 0 2336 2268 7 627 3501 181 22 29 chrUextra 5625462 5626278 -23378378 + SAR_DM Satellite Satellite 267 1076 -396 7 627 244 143 0 0 chrUextra 5626293 5626335 -23378321 + SAR_DM Satellite Satellite 547 588 -884 7 627 1372 19 0 18 chrUextra 5626631 5626796 -23377860 - NTS_DM Other Other -78 162 1 7 627 1588 28 18 32 chrUextra 5626796 5627015 -23377641 - NTS_DM Other Other 0 240 25 7 627 268 196 0 19 chrUextra 5627085 5627137 -23377519 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 627 1039 53 0 15 chrUextra 5627175 5627308 -23377348 + G_DM LINE Jockey 2653 2783 -1563 7 627 180 0 0 0 chrUextra 5627913 5627933 -23376723 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 627 3800 180 18 26 chrUextra 5628381 5629240 -23375416 - SAR_DM Satellite Satellite -268 1204 353 7 627 7526 22 1 1 chrUextra 5629354 5630227 -23374429 - R1_DM LINE R1 -1231 4125 3253 7 627 7405 39 0 1 chrUextra 5630327 5631200 -23373456 + IDEFIX_I LTR Gypsy 1199 2070 -3558 7 627 2668 82 23 21 chrUextra 5631300 5632171 -23372485 + DMSAT6 Satellite Satellite 1 873 0 7 627 1620 184 61 38 chrUextra 5632273 5632668 -23371988 - TART LINE telomeric -5052 9425 9022 7 627 1257 188 23 111 chrUextra 5632668 5633141 -23371515 - TAHRE LINE telomeric -3220 7243 6944 7 627 3021 184 96 14 chrUextra 5633271 5634119 -23370537 - SAR_DM Satellite Satellite -397 917 1 7 627 7338 17 7 3 chrUextra 5634219 5635092 -23369564 + Invader2_I LTR Gypsy 2800 3675 -917 7 627 26 64 0 0 chrUextra 5635555 5635602 -23369054 + AT_rich Low_complexity Low_complexity 1 47 0 7 627 33 25 0 0 chrUextra 5635623 5635663 -23368993 + AT_rich Low_complexity Low_complexity 1 40 0 7 628 1239 301 60 11 chrUextra 5636165 5636719 -23367937 - OSVALDO_I LTR Gypsy -3729 2924 2344 7 628 482 256 64 5 chrUextra 5636810 5637028 -23367628 - OSVALDO_I LTR Gypsy -4568 2085 1857 7 628 3897 5 0 64 chrUextra 5637138 5637610 -23367046 - MICROPIA_LTR LTR Gypsy -34 442 1 7 628 1260 120 79 56 chrUextra 5637610 5638011 -23366645 - TART LINE telomeric -4660 9817 9467 7 628 7318 35 6 2 chrUextra 5638111 5638984 -23365672 + MDG1_I LTR Gypsy 1601 2476 -4120 7 628 2489 4 4 0 chrUextra 5639084 5639356 -23365300 + DM412B_LTR LTR Gypsy 210 482 -89 7 628 3767 57 8 3 chrUextra 5639477 5639957 -23364699 + DMRT1B LINE R1 1 444 -4739 7 628 6341 9 41 14 chrUextra 5640057 5640831 -23363825 + PROTOP_A DNA P 311 1105 0 7 628 1404 163 0 0 chrUextra 5641030 5641324 -23363332 - TART_B1 LINE telomeric -8839 1815 1522 7 628 2727 97 25 56 chrUextra 5641345 5641791 -23362865 - TART LINE telomeric -8723 5754 5323 7 628 749 136 114 0 chrUextra 5641771 5641903 -23362753 - TART LINE telomeric -10594 3883 3737 7 628 1706 304 42 14 chrUextra 5642042 5642867 -23361789 - Copia_I LTR Copia -932 3661 2814 7 628 682 0 0 0 chrUextra 5642978 5643054 -23361602 + NOMAD_I LTR Gypsy 6497 6572 0 7 628 4800 0 0 0 chrUextra 5643054 5643572 -23361084 + NOMAD_LTR LTR Gypsy 1 518 0 7 628 551 0 131 4 chrUextra 5643572 5643809 -23360847 + (TA)n Simple_repeat Simple_repeat 1 267 0 7 628 40 0 0 0 chrUextra 5643809 5643849 -23360807 + AT_rich Low_complexity Low_complexity 1 40 0 7 628 7935 3 0 0 chrUextra 5643949 5644822 -23359834 - ROVER-I_DM LTR Gypsy -2853 3731 2859 7 628 3415 173 99 3 chrUextra 5644949 5645795 -23358861 + Gypsy12_I LTR Gypsy 2495 3421 -2125 7 628 7575 22 25 1 chrUextra 5645895 5646768 -23357888 - DMCR1A LINE CR1 -3084 1386 493 7 628 6466 27 11 64 chrUextra 5646868 5647741 -23356915 - BATUMI_I LTR Pao -6329 1634 808 7 628 3603 197 13 20 chrUextra 5647842 5648713 -23355943 + SAR_DM Satellite Satellite 1 864 -225 7 628 4990 99 20 12 chrUextra 5648813 5649560 -23355096 + S_DM DNA Tc1 984 1736 0 7 628 967 45 8 8 chrUextra 5649560 5649685 -23354971 + CIRCE LINE Composite 4493 4617 -1739 7 628 2601 171 9 32 chrUextra 5649789 5650344 -23354312 - SAR_DM Satellite Satellite -365 1107 566 7 628 2488 7 0 16 chrUextra 5650348 5650657 -23353999 - DOC LINE Jockey 0 4725 4422 7 628 3834 163 134 15 chrUextra 5650757 5651627 -23353029 + TART_B1 LINE telomeric 1756 2729 -7925 7 628 3500 212 28 10 chrUextra 5651729 5652601 -23352055 + SAR_DM Satellite Satellite 278 1164 -308 7 628 999 9 0 0 chrUextra 5652701 5652810 -23351846 - NTS_DM Other Other -131 109 1 7 628 1509 15 20 25 chrUextra 5652810 5653014 -23351642 - NTS_DM Other Other 0 240 38 7 628 936 9 0 27 chrUextra 5653014 5653126 -23351530 - NTS_DM Other Other -107 133 25 7 628 21 57 0 0 chrUextra 5653152 5653187 -23351469 + AT_rich Low_complexity Low_complexity 1 35 0 7 628 1350 18 0 6 chrUextra 5653187 5653352 -23351304 - NTS_DM Other Other -39 201 38 7 628 936 9 0 27 chrUextra 5653352 5653464 -23351192 - NTS_DM Other Other -107 133 25 7 628 403 36 0 18 chrUextra 5653516 5653573 -23351083 - NTS_DM Other Other -39 201 146 7 628 3843 182 16 22 chrUextra 5653673 5654539 -23350117 + SAR_DM Satellite Satellite 230 1090 -382 7 628 7307 35 1 7 chrUextra 5654645 5655517 -23349139 + MDG1_I LTR Gypsy 3393 4259 -2337 7 628 3455 3 3 0 chrUextra 5655617 5656000 -23348656 - NOMAD_LTR LTR Gypsy -134 384 1 7 628 265 91 0 0 chrUextra 5656249 5656282 -23348374 + Baggins1 LINE LOA 4727 4759 -694 7 628 780 103 241 0 chrUextra 5656287 5656432 -23348224 + FB4_DM DNA Tc1 3908 4087 -2 7 628 1003 45 0 17 chrUextra 5656605 5656959 -23347697 + RSP Satellite Satellite 1 348 0 7 628 954 94 4 17 chrUextra 5656989 5657461 -23347195 + RSP Satellite Satellite 1 466 0 7 628 4044 11 0 62 chrUextra 5657561 5658057 -23346599 + MICROPIA_LTR LTR Gypsy 12 476 0 7 628 3111 21 50 0 chrUextra 5658057 5658433 -23346223 - ACCORD2_I LTR Gypsy -6128 1084 690 7 628 4944 20 41 3 chrUextra 5658533 5659124 -23345532 + R1_DM LINE R1 3703 4315 -1041 7 628 1887 23 32 0 chrUextra 5659119 5659338 -23345318 + R1_DM LINE R1 5131 5356 0 7 628 272 29 0 0 chrUextra 5659371 5659405 -23345251 + R1_DM LINE R1 1 34 -5322 7 628 4362 2 0 0 chrUextra 5659505 5659976 -23344680 + ACCORD_LTR LTR Gypsy 88 558 0 7 628 2139 50 7 9 chrUextra 5659976 5660377 -23344279 - R1_DM LINE R1 -2227 3129 2697 7 628 3552 17 7 0 chrUextra 5660478 5660893 -23343763 + ACCORD2_I LTR Gypsy 3274 3691 -3521 7 628 4119 4 0 0 chrUextra 5660897 5661349 -23343307 + ACCORD2_I LTR Gypsy 4093 4544 -2668 7 628 3192 155 66 24 chrUextra 5661612 5662247 -23342409 - Stalker2_I LTR Gypsy -6499 903 242 7 628 2697 189 54 16 chrUextra 5662421 5663290 -23341366 - SAR_DM Satellite Satellite -672 902 1 7 628 4316 142 155 1 chrUextra 5663394 5664264 -23340392 - DM176_I LTR Gypsy -2312 4108 3105 7 628 224 185 31 0 chrUextra 5664553 5664618 -23340038 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 628 53 17 0 0 chrUextra 5664839 5664899 -23339757 + AT_rich Low_complexity Low_complexity 1 60 0 7 628 21 36 0 0 chrUextra 5665074 5665102 -23339554 + AT_rich Low_complexity Low_complexity 1 28 0 7 628 4068 178 85 18 chrUextra 5665337 5666209 -23338447 + TAHRE LINE telomeric 9510 10439 -24 7 628 1133 8 0 0 chrUextra 5666309 5666432 -23338224 - BATUMI_I LTR Pao -7840 123 1 7 628 2323 11 0 25 chrUextra 5666432 5666711 -23337945 - BATUMI_LTR LTR Pao 0 272 1 7 628 21 0 0 0 chrUextra 5666848 5666869 -23337787 + AT_rich Low_complexity Low_complexity 1 21 0 7 628 2758 7 0 0 chrUextra 5667281 5667585 -23337071 - TABOR_LTR LTR Gypsy -202 304 1 7 628 4097 14 35 9 chrUextra 5667583 5668153 -23336503 - TABOR_I LTR Gypsy 0 6336 5752 7 628 7597 15 8 1 chrUextra 5668253 5669125 -23335531 - G2_DM LINE Jockey -2134 968 91 7 628 1661 31 0 5 chrUextra 5669225 5669419 -23335237 + PROTOP DNA P 4288 4480 0 7 628 26 30 0 0 chrUextra 5669785 5669818 -23334838 + AT_rich Low_complexity Low_complexity 1 33 0 7 628 23 68 0 0 chrUextra 5669864 5669908 -23334748 + AT_rich Low_complexity Low_complexity 1 44 0 7 628 21 89 0 0 chrUextra 5669944 5670000 -23334656 + AT_rich Low_complexity Low_complexity 1 56 0 7 628 5264 82 15 1 chrUextra 5670197 5671066 -23333590 - Gypsy6_I LTR Gypsy -3742 3270 1962 7 628 706 102 0 27 chrUextra 5671179 5671290 -23333366 - Gypsy12_I LTR Gypsy -4980 566 459 7 628 1856 94 18 55 chrUextra 5671303 5671629 -23333027 - Gypsy12_I LTR Gypsy -5206 340 27 7 628 1754 193 22 28 chrUextra 5671599 5671999 -23332657 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 628 327 24 0 0 chrUextra 5671998 5672039 -23332617 - Gypsy12_I LTR Gypsy 0 5546 5506 7 628 2522 191 18 5 chrUextra 5672146 5673013 -23331643 + SAR_DM Satellite Satellite 1 878 -751 7 628 974 76 6 17 chrUextra 5673129 5673985 -23330671 + RSP Satellite Satellite 1 846 0 7 628 1650 299 45 31 chrUextra 5674169 5674941 -23329715 - Gypsy4_I LTR Gypsy -1804 4484 3702 7 628 3839 176 16 22 chrUextra 5675060 5675928 -23328728 + SAR_DM Satellite Satellite 196 1058 -414 7 628 2634 172 9 10 chrUextra 5676032 5676901 -23327755 - SAR_DM Satellite Satellite -425 867 1 7 628 2358 111 50 32 chrUextra 5677001 5677873 -23326783 - DMSAT6 Satellite Satellite -94 887 1 7 628 3727 178 23 23 chrUextra 5677975 5678839 -23325817 - SAR_DM Satellite Satellite -262 1210 347 7 628 2343 21 32 0 chrUextra 5678945 5679227 -23325429 + R1_DM LINE R1 4776 5066 -290 7 628 988 35 0 0 chrUextra 5679224 5679338 -23325318 + R1_DM LINE R1 5243 5356 0 7 628 3323 61 34 5 chrUextra 5679371 5679816 -23324840 + R1_DM LINE R1 1 458 -4898 7 628 3860 186 12 8 chrUextra 5679939 5680789 -23323867 - SAR_DM Satellite Satellite -396 1076 224 7 628 7383 26 5 1 chrUextra 5680891 5681761 -23322895 + R1_DM LINE R1 4005 4877 -479 7 628 4255 24 110 0 chrUextra 5681861 5682397 -23322259 + R1_DM LINE R1 4472 5066 -290 7 628 961 44 0 0 chrUextra 5682394 5682508 -23322148 + R1_DM LINE R1 5243 5356 0 7 628 1388 89 5 0 chrUextra 5682541 5682732 -23321924 + R1_DM LINE R1 1 192 -5164 7 628 1805 140 4 4 chrUextra 5682842 5683166 -23321490 - BATUMI_I LTR Pao -3410 4504 4105 7 628 1541 22 33 0 chrUextra 5683159 5683341 -23321315 + Copia2_I LTR Copia 2104 2291 -1871 7 628 979 71 0 0 chrUextra 5683334 5683460 -23321196 + Copia2_LTR_DM LTR Copia 73 198 0 7 628 500 276 138 0 chrUextra 5683460 5683702 -23320954 - TOM_I LTR Gypsy -350 5762 5595 7 628 2421 4 0 0 chrUextra 5683807 5684076 -23320580 + QUASIMODO_LTR LTR Gypsy 390 658 0 7 628 5008 15 47 12 chrUextra 5684076 5684676 -23319980 + QUASIMODO_I LTR Gypsy 1 621 -5439 7 628 3628 199 17 18 chrUextra 5684777 5685643 -23319013 - SAR_DM Satellite Satellite -466 864 1 7 628 623 13 0 0 chrUextra 5685747 5685824 -23318832 + NTS_DM Other Other 57 133 -107 7 628 1304 18 0 6 chrUextra 5685824 5685989 -23318667 + NTS_DM Other Other 38 201 -39 7 628 907 9 0 27 chrUextra 5686041 5686153 -23318503 + NTS_DM Other Other 25 133 -107 7 628 1287 24 0 6 chrUextra 5686153 5686318 -23318338 + NTS_DM Other Other 38 201 -39 7 628 907 9 0 27 chrUextra 5686379 5686491 -23318165 + NTS_DM Other Other 25 133 -107 7 628 950 48 0 8 chrUextra 5686491 5686618 -23318038 + NTS_DM Other Other 38 163 -77 7 628 2038 183 21 8 chrUextra 5686718 5687586 -23317070 - SAR_DM Satellite Satellite -495 879 1 7 628 21 89 0 0 chrUextra 5688455 5688511 -23316145 + AT_rich Low_complexity Low_complexity 1 56 0 7 628 3469 209 8 20 chrUextra 5688674 5689531 -23315125 + SAR_DM Satellite Satellite 1 847 -216 7 628 7005 22 36 0 chrUextra 5689631 5690502 -23314154 + Invader2_I LTR Gypsy 1967 2868 -1724 7 628 7487 32 2 0 chrUextra 5690602 5691473 -23313183 + G5A_DM LINE Jockey 1694 2566 -275 7 628 1485 153 86 18 chrUextra 5691580 5691882 -23312774 - MDG1_LTR LTR Gypsy -30 412 87 7 628 1620 11 0 11 chrUextra 5691882 5692155 -23312501 + (TTA)n Simple_repeat Simple_repeat 1 269 0 7 628 364 89 8 95 chrUextra 5692164 5692279 -23312377 - MDG1_I LTR Gypsy 0 6596 6529 7 628 493 114 52 22 chrUextra 5692299 5692433 -23312223 - MDG1_I LTR Gypsy -64 6532 6395 7 628 2510 241 42 61 chrUextra 5692551 5693407 -23311249 + Gypsy12_LTR LTR Gypsy 105 944 -1392 7 628 3551 175 37 31 chrUextra 5693517 5694386 -23310270 + SAR_DM Satellite Satellite 340 1213 -259 7 628 6032 10 21 0 chrUextra 5694486 5694854 -23309802 - STALKER4_I LTR Gypsy -834 5696 5329 7 628 183 80 0 0 chrUextra 5694854 5694879 -23309777 + (TATG)n Simple_repeat Simple_repeat 4 28 0 7 628 6032 10 21 0 chrUextra 5694879 5695217 -23309439 - STALKER4_I LTR Gypsy -1202 5328 4976 7 628 977 72 14 0 chrUextra 5695216 5695354 -23309302 + DMSAT6 Satellite Satellite 318 457 -13 7 628 2024 18 0 0 chrUextra 5695457 5695686 -23308970 + MICROPIA_I LTR Gypsy 1951 2179 -2297 7 628 5727 9 0 0 chrUextra 5695692 5696328 -23308328 + MICROPIA_I LTR Gypsy 2306 2941 -1535 7 628 7533 5 23 1 chrUextra 5696428 5697299 -23307357 + DM176_I LTR Gypsy 3866 4755 -1665 7 628 3406 233 3 3 chrUextra 5697401 5698259 -23306397 - DM412 LTR Gypsy -518 6884 5502 7 628 3342 132 33 5 chrUextra 5698380 5698959 -23305697 - Stalker2_I LTR Gypsy -6566 836 242 7 628 294 43 87 0 chrUextra 5699169 5699215 -23305441 - Stalker2_I LTR Gypsy -7352 50 1 7 628 23 0 0 0 chrUextra 5699787 5699810 -23304846 + AT_rich Low_complexity Low_complexity 1 23 0 7 628 4762 123 52 1 chrUextra 5700312 5701183 -23303473 + BATUMI_I LTR Pao 3671 4656 -3258 7 628 47 0 0 0 chrUextra 5701489 5701536 -23303120 + AT_rich Low_complexity Low_complexity 1 47 0 7 628 30 69 0 0 chrUextra 5701586 5701644 -23303012 + AT_rich Low_complexity Low_complexity 1 58 0 7 628 2780 221 20 1 chrUextra 5702254 5703125 -23301531 - ROVER-I_DM LTR Gypsy -2959 3625 2535 7 628 3492 168 51 59 chrUextra 5703229 5704096 -23300560 - Gypsy12_LTR LTR Gypsy -4 2332 1473 7 628 3571 200 6 16 chrUextra 5704196 5705057 -23299599 + SAR_DM Satellite Satellite 267 1118 -354 7 628 314 213 0 21 chrUextra 5704971 5705067 -23299589 - XDMR_DM Unknown Unknown 0 360 267 7 628 6262 34 0 0 chrUextra 5705167 5705933 -23298723 - ROO_I LTR Pao -3034 5222 4457 7 628 910 42 0 8 chrUextra 5705919 5706038 -23298618 - ROO_I LTR Pao -4398 3858 3741 7 628 2568 3 0 0 chrUextra 5706138 5706421 -23298235 + BEL_LTR LTR Pao 79 361 0 7 628 5390 0 0 2 chrUextra 5706421 5707009 -23297647 + BEL_I LTR Pao 1 587 -4817 7 628 256 318 40 40 chrUextra 5707301 5707478 -23297178 - Gypsy6_I LTR Gypsy -2298 4714 4538 7 628 259 128 0 21 chrUextra 5708166 5708214 -23296442 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 628 259 128 0 21 chrUextra 5708440 5708488 -23296168 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 628 277 106 0 21 chrUextra 5708718 5708766 -23295890 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 628 372 49 65 16 chrUextra 5708788 5708850 -23295806 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 628 452 198 0 10 chrUextra 5708849 5708951 -23295705 - DMLTR5 LTR Gypsy 0 266 166 7 628 4663 2 0 4 chrUextra 5709051 5709573 -23295083 + QUASIMODO_LTR LTR Gypsy 139 658 0 7 628 2991 9 0 0 chrUextra 5709574 5709922 -23294734 - DM176_I LTR Gypsy -4458 1962 1615 7 628 3745 180 14 24 chrUextra 5710026 5710892 -23293764 - SAR_DM Satellite Satellite -382 1090 234 7 628 3471 214 19 13 chrUextra 5711967 5712832 -23291824 + SAR_DM Satellite Satellite 1 870 -203 7 628 2171 11 62 0 chrUextra 5712935 5713195 -23291461 - R1_DM LINE R1 -1645 3711 3436 7 628 2669 39 57 4 chrUextra 5713185 5713805 -23290851 - R1_DM LINE R1 -2076 3280 2590 7 628 7242 23 41 1 chrUextra 5713905 5714775 -23289881 - DMRT1A LINE R1 -647 4536 3632 7 628 3639 10 0 0 chrUextra 5714875 5715277 -23289379 + GTWIN_LTR LTR Gypsy 94 495 0 7 628 4103 4 13 0 chrUextra 5715277 5715745 -23288911 + Copia2_I LTR Copia 424 897 -3265 7 628 2323 171 29 0 chrUextra 5715845 5716265 -23288391 - G6_DM LINE Jockey -854 1188 757 7 628 637 91 162 0 chrUextra 5716356 5716455 -23288201 - HELENA_RT LINE Jockey -774 543 429 7 628 1540 117 45 0 chrUextra 5716468 5716715 -23287941 - HELENA_RT LINE Jockey -1001 316 59 7 628 427 141 81 0 chrUextra 5716815 5716914 -23287742 - Stalker2_I LTR Gypsy -7054 348 242 7 628 281 65 87 0 chrUextra 5717107 5717153 -23287503 - Stalker2_I LTR Gypsy -7352 50 1 7 628 1625 7 240 0 chrUextra 5717153 5717453 -23287203 - Stalker3_LTR LTR Gypsy 0 372 1 7 628 1906 26 4 4 chrUextra 5717453 5717681 -23286975 + R1_DM LINE R1 4830 5057 -299 7 628 7231 20 0 15 chrUextra 5717785 5718654 -23286002 - FW_DM LINE Jockey -985 3707 2852 7 628 22 35 0 0 chrUextra 5718809 5718838 -23285818 + AT_rich Low_complexity Low_complexity 1 29 0 7 628 181 77 0 71 chrUextra 5718870 5718912 -23285744 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 7 628 558 286 106 31 chrUextra 5719149 5719541 -23285115 - IDEFIX_I LTR Gypsy -2876 3087 2541 7 628 22 56 0 0 chrUextra 5719541 5719577 -23285079 + AT_rich Low_complexity Low_complexity 1 36 0 7 628 4342 31 107 40 chrUextra 5719740 5720595 -23284061 + DMCR1A LINE CR1 2234 3146 -1324 7 628 25 75 0 0 chrUextra 5720964 5721017 -23283639 + AT_rich Low_complexity Low_complexity 1 53 0 7 628 21 57 0 0 chrUextra 5721055 5721090 -23283566 + AT_rich Low_complexity Low_complexity 1 35 0 7 628 7853 3 6 0 chrUextra 5721665 5722524 -23282132 + Gypsy3_I LTR Gypsy 1384 2247 -3930 7 628 3818 187 22 17 chrUextra 5722640 5723505 -23281151 - SAR_DM Satellite Satellite -326 1146 278 7 628 729 184 13 26 chrUextra 5723633 5723789 -23280867 + HETRP_DM Satellite Satellite 1529 1682 -190 7 628 726 185 17 58 chrUextra 5723919 5724091 -23280565 + HETRP_DM Satellite Satellite 1518 1682 -190 7 628 708 201 13 25 chrUextra 5724242 5724400 -23280256 + HETRP_DM Satellite Satellite 1529 1684 -188 7 628 1874 212 88 48 chrUextra 5724575 5725156 -23279500 + Gypsy12_LTR LTR Gypsy 588 1191 -1145 7 628 2164 32 112 7 chrUextra 5725159 5725445 -23279211 - CIRCE LINE Composite -5969 387 72 7 628 6814 44 0 16 chrUextra 5725545 5726415 -23278241 + R1_DM LINE R1 217 1072 -4284 7 628 3929 179 26 24 chrUextra 5726515 5727385 -23277271 + SAR_DM Satellite Satellite 342 1213 -259 7 628 51 31 0 0 chrUextra 5727975 5728040 -23276616 + AT_rich Low_complexity Low_complexity 1 65 0 7 628 2497 183 6 5 chrUextra 5728455 5729325 -23275331 + SAR_DM Satellite Satellite 1 870 -558 7 628 4092 231 2 2 chrUextra 5729425 5730295 -23274361 + TABOR_I LTR Gypsy 3616 4485 -1851 7 628 192 125 0 0 chrUextra 5730506 5730538 -23274118 + (TC)n Simple_repeat Simple_repeat 1 32 0 7 628 7786 19 1 0 chrUextra 5731365 5732235 -23272421 - Gypsy12_I LTR Gypsy -2199 3347 2477 7 628 2263 122 33 36 chrUextra 5732335 5733181 -23271475 + DMSAT6 Satellite Satellite 1 843 -83 7 628 3289 189 33 27 chrUextra 5733305 5734124 -23270532 + SAR_DM Satellite Satellite 446 1269 -203 7 628 938 70 28 0 chrUextra 5734032 5734175 -23270481 - ARS406_DM Unknown Unknown -175 178 32 7 628 2651 7 0 0 chrUextra 5734275 5734565 -23270091 - MDG3_I LTR Gypsy -4696 290 1 7 628 2343 15 4 0 chrUextra 5734564 5734830 -23269826 - MDG3_LTR LTR Gypsy 0 267 1 7 628 2453 51 48 0 chrUextra 5734830 5735145 -23269511 + Copia_I LTR Copia 1344 1673 -2920 7 628 879 81 0 8 chrUextra 5735245 5735370 -23269286 + ARS406_DM Unknown Unknown 66 189 -164 7 628 3455 194 24 21 chrUextra 5735272 5736114 -23268542 - SAR_DM Satellite Satellite -208 1264 421 7 628 5223 17 25 13 chrUextra 5736214 5736822 -23267834 - ACCORD2_I LTR Gypsy -6078 1134 520 7 628 2211 19 11 4 chrUextra 5736821 5737083 -23267573 - ACCORD2_I LTR Gypsy -6814 398 135 7 628 429 120 0 160 chrUextra 5737183 5737296 -23267360 + Stalker3_LTR LTR Gypsy 287 399 -3 7 628 6461 37 3 1 chrUextra 5737296 5738052 -23266604 + DIVER_I LTR Pao 3292 4048 -1595 7 628 7222 24 58 1 chrUextra 5738152 5739021 -23265635 - R1_DM LINE R1 -1021 4335 3418 7 628 1235 274 130 67 chrUextra 5739124 5739925 -23264731 - MDG3_I LTR Gypsy -1244 3742 2892 7 628 3940 177 11 11 chrUextra 5740090 5740917 -23263739 - SAR_DM Satellite Satellite -466 1006 180 7 628 1066 81 0 0 chrUextra 5740811 5740959 -23263697 + ARS406_DM Unknown Unknown 1 148 -205 7 628 4675 8 0 0 chrUextra 5741059 5741572 -23263084 + ROO_I LTR Pao 1457 1969 -6287 7 628 3486 5 0 3 chrUextra 5741544 5741926 -23262730 - ROO_I LTR Pao -564 7692 7312 7 628 4128 167 13 23 chrUextra 5742032 5742897 -23261759 + SAR_DM Satellite Satellite 246 1101 -371 7 628 779 336 68 10 chrUextra 5742839 5743155 -23261501 - ARS406_DM Unknown Unknown -9 351 2 7 628 3978 191 7 9 chrUextra 5743014 5743866 -23260790 + SAR_DM Satellite Satellite 180 1029 -443 7 628 7159 30 3 14 chrUextra 5743966 5744835 -23259821 - BATUMI_I LTR Pao -5558 2405 1546 7 628 7520 25 0 0 chrUextra 5744935 5745804 -23258852 + NINJA_I LTR Pao 1588 2456 -3555 7 628 3730 181 20 25 chrUextra 5745906 5746773 -23257883 + SAR_DM Satellite Satellite 293 1154 -318 7 628 2902 33 0 0 chrUextra 5746873 5747209 -23257447 - PROTOP_A DNA P -769 336 1 7 628 3387 26 0 99 chrUextra 5747228 5747742 -23256914 + NINJA_I LTR Pao 1 463 -5548 7 628 1884 25 4 59 chrUextra 5748280 5748534 -23256122 - ALUII_DM Unknown Unknown 0 240 1 7 628 21 57 0 0 chrUextra 5748534 5748569 -23256087 + AT_rich Low_complexity Low_complexity 1 35 0 7 628 7667 14 51 0 chrUextra 5748811 5749680 -23254976 - Copia2_I LTR Copia -386 3776 2864 7 628 47 0 0 0 chrUextra 5749826 5749873 -23254783 + AT_rich Low_complexity Low_complexity 1 47 0 7 628 318 135 0 0 chrUextra 5750749 5750801 -23253855 + MAX_I LTR Pao 1109 1160 -6754 7 628 3628 118 73 77 chrUextra 5750801 5751618 -23253038 + MAX_I LTR Pao 938 1751 -6163 7 628 2716 105 16 13 chrUextra 5751718 5752587 -23252069 + DMSAT6 Satellite Satellite 1 871 -119 7 628 3829 189 24 15 chrUextra 5752688 5753556 -23251100 - SAR_DM Satellite Satellite -255 1217 342 7 628 7760 8 1 1 chrUextra 5753656 5754525 -23250131 - R1_DM LINE R1 -1180 4176 3308 7 628 1453 11 16 5 chrUextra 5754625 5754811 -23249845 + DM297_I LTR Gypsy 3834 4021 -2146 7 628 3735 14 0 0 chrUextra 5754790 5755234 -23249422 + DM297_I LTR Gypsy 5724 6167 0 7 628 2185 8 11 11 chrUextra 5755234 5755494 -23249162 + DM297_LTR LTR Gypsy 1 260 -154 7 628 5571 22 5 2 chrUextra 5755598 5756236 -23248420 + TC1_DM DNA Tc1 1027 1666 0 7 628 7360 30 0 0 chrUextra 5756563 5757432 -23247224 - HETA LINE telomeric -2594 3487 2619 7 628 2204 16 16 0 chrUextra 5757540 5757786 -23246870 + PROTOP_A DNA P 840 1089 -16 7 628 2818 79 24 3 chrUextra 5757793 5758401 -23246255 + TART_B1 LINE telomeric 2399 3119 -7535 7 628 2940 81 2 21 chrUextra 5758501 5758919 -23245737 - DOC3_DM LINE Jockey -1608 3132 2723 7 628 1241 50 0 0 chrUextra 5758997 5759157 -23245499 + DMCR1A LINE CR1 114 273 -4197 7 628 1192 75 0 6 chrUextra 5759168 5759328 -23245328 + DMCR1A LINE CR1 330 488 -3982 7 628 2242 180 49 36 chrUextra 5759469 5760021 -23244635 - Stalker2_I LTR Gypsy -6553 849 291 7 628 28 48 0 0 chrUextra 5760028 5760070 -23244586 + AT_rich Low_complexity Low_complexity 1 42 0 7 628 870 119 5 39 chrUextra 5760175 5760337 -23244319 - STALKER4_LTR LTR Gypsy -3 399 230 7 628 3542 190 43 22 chrUextra 5760445 5761305 -23243351 - SAR_DM Satellite Satellite -216 1256 379 7 628 3981 0 2 0 chrUextra 5761405 5761834 -23242822 + QUASIMODO_LTR LTR Gypsy 229 658 0 7 628 216 0 0 0 chrUextra 5761834 5761858 -23242798 + (TA)n Simple_repeat Simple_repeat 1 24 0 7 628 2168 20 16 0 chrUextra 5761860 5762113 -23242543 - DM176_LTR LTR Gypsy 0 507 251 7 628 1436 13 0 0 chrUextra 5762114 5762273 -23242383 - DM176_LTR LTR Gypsy -224 283 125 7 628 471 200 0 18 chrUextra 5762373 5762485 -23242171 + XDMR_DM Unknown Unknown 251 360 0 7 628 3698 189 11 19 chrUextra 5762399 5763241 -23241415 - SAR_DM Satellite Satellite -354 1118 284 7 628 2423 103 16 35 chrUextra 5763341 5764209 -23240447 - DMSAT6 Satellite Satellite -119 851 1 7 628 1699 267 51 52 chrUextra 5764312 5765153 -23239503 - SAR_DM Satellite Satellite -439 1033 194 7 628 3885 11 2 64 chrUextra 5766245 5766726 -23237930 + MICROPIA_LTR LTR Gypsy 26 476 0 7 628 3459 11 5 0 chrUextra 5766734 5767113 -23237543 + Invader1_LTR LTR Gypsy 1 381 -42 7 629 2314 202 29 6 chrUextra 5767213 5768081 -23236575 - SAR_DM Satellite Satellite -784 887 1 7 629 25 0 0 0 chrUextra 5768298 5768323 -23236333 + AT_rich Low_complexity Low_complexity 1 25 0 7 629 2227 159 228 22 chrUextra 5768338 5769049 -23235607 + STALKER4_I LTR Gypsy 228 1130 -5400 7 629 4066 181 14 9 chrUextra 5769155 5770016 -23234640 + SAR_DM Satellite Satellite 180 1044 -428 7 629 7513 6 0 28 chrUextra 5770117 5770982 -23233674 - Invader3_I LTR Gypsy -2636 2252 1412 7 629 3519 185 24 30 chrUextra 5771086 5771931 -23232725 + SAR_DM Satellite Satellite 425 1264 -208 7 629 848 62 0 0 chrUextra 5771834 5771946 -23232710 - ARS406_DM Unknown Unknown -164 189 78 7 629 1375 63 10 59 chrUextra 5772053 5772255 -23232401 + BLOOD_LTR LTR Gypsy 67 258 -141 7 629 3850 38 141 5 chrUextra 5772370 5772921 -23231735 + BLOOD_I LTR Gypsy 1 626 -5987 7 629 2156 63 0 0 chrUextra 5773021 5773292 -23231364 + BS2 LINE Jockey 2658 2928 -1793 7 629 1927 9 0 18 chrUextra 5773292 5773511 -23231145 + ACCORD2_LTR LTR Gypsy 1 215 0 7 629 2419 36 3 38 chrUextra 5773511 5773880 -23230776 + ACCORD2_I LTR Gypsy 1 417 -6795 7 629 4027 0 0 0 chrUextra 5774957 5775417 -23229239 + I_DM LINE I 4998 5457 -774 7 629 234 0 0 0 chrUextra 5775417 5775443 -23229213 + (TAA)n Simple_repeat Simple_repeat 3 28 0 7 629 1767 207 32 8 chrUextra 5775446 5775825 -23228831 + TAHRE LINE telomeric 603 990 -9473 7 629 2512 115 19 20 chrUextra 5775925 5776779 -23227877 - DMSAT6 Satellite Satellite -35 853 1 7 629 7409 32 1 0 chrUextra 5776893 5777761 -23226895 + R1_DM LINE R1 4302 5170 -186 7 629 7355 16 0 0 chrUextra 5777861 5778729 -23225927 + BEL_I LTR Pao 1999 2866 -2538 7 629 2972 6 0 0 chrUextra 5778829 5779175 -23225481 + NOMAD_LTR LTR Gypsy 173 518 0 7 629 3749 32 0 0 chrUextra 5779181 5779697 -23224959 - Stalker2_I LTR Gypsy -639 6258 5690 7 629 3500 184 17 19 chrUextra 5779798 5780665 -23223991 - SAR_DM Satellite Satellite -261 1211 346 7 629 484 87 32 11 chrUextra 5780775 5780868 -23223788 - ARS406_DM Unknown Unknown -164 189 95 7 629 3391 189 8 8 chrUextra 5780832 5781633 -23223023 + SAR_DM Satellite Satellite 205 1005 -467 7 629 2042 215 12 54 chrUextra 5781741 5782312 -23222344 - Gypsy12_LTR LTR Gypsy -1777 559 13 7 629 1946 81 0 14 chrUextra 5782324 5782601 -23222055 - Gypsy12_I LTR Gypsy 0 5546 5274 7 629 3113 3 0 0 chrUextra 5782701 5783068 -23221588 + FW_DM LINE Jockey 4326 4692 0 7 629 4173 24 0 0 chrUextra 5783065 5783564 -23221092 + R1_DM LINE R1 4287 4785 -571 7 629 2962 214 17 20 chrUextra 5783669 5784537 -23220119 + SAR_DM Satellite Satellite 1 865 -216 7 629 2623 0 7 0 chrUextra 5784637 5784945 -23219711 - FW_DM LINE Jockey -4380 312 3 7 629 2497 168 14 9 chrUextra 5784945 5785505 -23219151 - SAR_DM Satellite Satellite -516 956 394 7 629 7437 2 2 3 chrUextra 5785605 5786473 -23218183 + SSU-rRNA_Dme rRNA rRNA 989 1855 -140 7 629 2432 116 10 31 chrUextra 5786573 5787440 -23217216 + DMSAT6 Satellite Satellite 1 849 -97 7 629 4849 17 2 3 chrUextra 5787541 5788139 -23216517 + G2_DM LINE Jockey 2506 3102 0 7 629 617 92 0 20 chrUextra 5788306 5788406 -23216250 + ROVER-LTR_DM LTR Gypsy 177 274 -93 7 629 1969 107 59 57 chrUextra 5788669 5789057 -23215599 - Gypsy6_LTR LTR Gypsy -18 389 1 7 629 180 77 0 0 chrUextra 5789311 5789337 -23215319 + (TAAAAA)n Simple_repeat Simple_repeat 4 29 0 7 629 3353 183 21 24 chrUextra 5789477 5790344 -23214312 - SAR_DM Satellite Satellite -257 1215 352 7 629 3248 52 68 40 chrUextra 5790581 5791079 -23213577 - PROTOP DNA P -3968 512 1 7 629 520 130 62 14 chrUextra 5791128 5791271 -23213385 - TART LINE telomeric -3988 10489 10370 7 629 501 231 66 111 chrUextra 5791506 5791929 -23212727 + ROVER-I_DM LTR Gypsy 1 404 -6180 7 629 2331 45 60 0 chrUextra 5791931 5792263 -23212393 + LOOPER1_DM DNA PiggyBac 1 352 -1529 7 629 540 56 0 0 chrUextra 5792397 5792469 -23212187 + (TAAAG)n Simple_repeat Simple_repeat 4 75 0 7 629 2052 12 0 0 chrUextra 5792471 5792725 -23211931 + TART LINE telomeric 7786 8039 -6438 7 629 3468 66 2 3 chrUextra 5792722 5793246 -23211410 + TART_B1 LINE telomeric 952 1453 -9201 7 629 3489 175 13 19 chrUextra 5793346 5794213 -23210443 - SAR_DM Satellite Satellite -399 1073 212 7 629 1505 11 6 0 chrUextra 5794870 5795049 -23209607 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 7 629 725 93 0 8 chrUextra 5795049 5795178 -23209478 + (TTCTC)n Simple_repeat Simple_repeat 4 132 0 7 629 224 0 0 162 chrUextra 5795337 5795547 -23209109 + (CTATA)n Simple_repeat Simple_repeat 3 178 0 7 629 1210 103 0 97 chrUextra 5795552 5795800 -23208856 + DIVER_LTR LTR Pao 1 224 0 7 629 2578 37 9 0 chrUextra 5795821 5796147 -23208509 + DIVER_I LTR Pao 1 329 -5314 7 629 6493 24 22 1 chrUextra 5796247 5797090 -23207566 - PROTOP_A DNA P -244 861 1 7 629 6092 38 86 1 chrUextra 5797214 5798081 -23206575 + Baggins1 LINE LOA 3816 4756 -697 7 629 3694 172 13 21 chrUextra 5798181 5799043 -23205613 - SAR_DM Satellite Satellite -372 1100 246 7 629 245 133 0 0 chrUextra 5799003 5799048 -23205608 + ARS406_DM Unknown Unknown 1 45 -308 7 629 1874 146 82 26 chrUextra 5799197 5799577 -23205079 - TART LINE telomeric -10480 3997 3597 7 629 3218 39 50 0 chrUextra 5799569 5800011 -23204645 - TART LINE telomeric -11657 2820 2357 7 629 980 138 35 26 chrUextra 5800225 5800456 -23204200 + NTS_DM Other Other 8 240 0 7 629 965 149 20 5 chrUextra 5800595 5800797 -23203859 + NTS_DM Other Other 1 205 -35 7 629 259 146 21 0 chrUextra 5800828 5800876 -23203780 + NTS_DM Other Other 1 49 -191 7 629 24 0 0 0 chrUextra 5801133 5801157 -23203499 + AT_rich Low_complexity Low_complexity 1 24 0 7 629 2890 86 207 30 chrUextra 5801220 5801946 -23202710 - DM412 LTR Gypsy 0 6897 6180 8 629 270 198 82 47 chrUextra 5802052 5802222 -23202434 + (TCTTG)n Simple_repeat Simple_repeat 3 178 0 8 629 280 174 83 42 chrUextra 5802146 5802314 -23202342 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 8 629 346 157 111 19 chrUextra 5802589 5802751 -23201905 + (TCTG)n Simple_repeat Simple_repeat 4 180 0 8 629 213 194 74 49 chrUextra 5802663 5802826 -23201830 + (TCTA)n Simple_repeat Simple_repeat 2 168 0 8 629 1394 281 41 41 chrUextra 5803987 5804838 -23199818 - SAR_DM Satellite Satellite -396 1076 226 8 629 270 276 29 0 chrUextra 5804745 5804850 -23199806 + XDMR_DM Unknown Unknown 8 115 -245 8 629 24 0 0 0 chrUextra 5805075 5805099 -23199557 + AT_rich Low_complexity Low_complexity 1 24 0 8 629 304 138 0 17 chrUextra 5805271 5805330 -23199326 - PROTOP DNA P -4422 58 1 7 629 3698 26 0 0 chrUextra 5805353 5805817 -23198839 + IDEFIX_I LTR Gypsy 1 464 -5164 8 629 2809 219 18 30 chrUextra 5805917 5806783 -23197873 + SAR_DM Satellite Satellite 1 855 -208 8 629 2453 91 29 35 chrUextra 5806884 5807741 -23196915 - DMSAT6 Satellite Satellite -82 851 1 8 629 1527 0 0 0 chrUextra 5808056 5808233 -23196423 - FW_DM LINE Jockey -4515 177 1 8 629 5519 11 1 0 chrUextra 5808818 5809472 -23195184 + G_DM LINE Jockey 562 1216 -3130 8 629 1779 19 0 0 chrUextra 5809471 5809685 -23194971 + G_DM LINE Jockey 1342 1555 -2791 8 629 3085 80 100 14 chrUextra 5809785 5810592 -23194064 + Gypsy12_I LTR Gypsy 4670 5546 0 8 629 318 96 19 0 chrUextra 5810591 5810643 -23194013 + Gypsy12_LTR LTR Gypsy 1 53 -2283 8 629 2231 229 36 38 chrUextra 5810752 5811576 -23193080 - SAR_DM Satellite Satellite -455 1017 195 8 629 891 82 0 0 chrUextra 5811483 5811617 -23193039 + ARS406_DM Unknown Unknown 1 134 -219 8 629 2778 38 152 5 chrUextra 5811719 5812324 -23192332 - R1_DM LINE R1 -4011 1345 652 8 629 1925 9 0 0 chrUextra 5812321 5812547 -23192109 + MICROPIA_LTR LTR Gypsy 7 232 -244 8 629 3089 234 10 15 chrUextra 5812686 5813553 -23191103 + Stalker2_I LTR Gypsy 5012 5874 -1528 8 629 556 114 0 11 chrUextra 5813653 5813742 -23190914 - NTS_DM Other Other -145 95 8 8 629 267 85 43 0 chrUextra 5813838 5813885 -23190771 - NTS_DM Other Other -191 49 1 8 629 954 114 0 6 chrUextra 5813915 5814082 -23190574 - NTS_DM Other Other -67 173 8 8 629 259 146 21 0 chrUextra 5814180 5814228 -23190428 - NTS_DM Other Other -191 49 1 8 629 1029 134 20 5 chrUextra 5814259 5814461 -23190195 - NTS_DM Other Other -35 205 1 8 629 4079 23 21 0 chrUextra 5814620 5815132 -23189524 + FW_DM LINE Jockey 4170 4692 0 8 629 2821 22 8 0 chrUextra 5815130 5815487 -23189169 - ROO_I LTR Pao -4051 4205 3846 8 629 1119 145 0 0 chrUextra 5815587 5816454 -23188202 + (TA)n Simple_repeat Simple_repeat 1 867 0 8 629 7038 29 0 0 chrUextra 5816554 5817420 -23187236 - R1_DM LINE R1 -2333 3023 2158 8 629 4793 31 28 0 chrUextra 5817521 5818167 -23186489 - Invader2_I LTR Gypsy -3927 665 2 8 629 1487 66 0 36 chrUextra 5818168 5818388 -23186268 - Invader2_LTR LTR Gypsy 0 266 55 8 629 893 98 4 17 chrUextra 5818508 5819019 -23185637 - RSP Satellite Satellite 0 504 1 8 629 782 105 0 17 chrUextra 5819058 5819352 -23185304 - RSP Satellite Satellite 0 289 1 8 629 2559 93 28 5 chrUextra 5819482 5819871 -23184785 - Gypsy2_I LTR Gypsy -338 5797 5400 8 629 3483 27 9 0 chrUextra 5819884 5820322 -23184334 - PROTOP_A DNA P 0 1105 664 8 629 438 212 0 9 chrUextra 5820422 5820536 -23184120 + XDMR_DM Unknown Unknown 248 360 0 8 629 3429 179 11 20 chrUextra 5820451 5821285 -23183371 - SAR_DM Satellite Satellite -353 1119 294 8 629 3892 165 3 4 chrUextra 5821393 5822105 -23182551 + ROVER-I_DM LTR Gypsy 4403 5113 -1471 8 629 1044 0 0 8 chrUextra 5822132 5822256 -23182400 - STALKER4_LTR LTR Gypsy 0 402 280 8 629 1877 176 12 8 chrUextra 5822356 5823218 -23181438 - SAR_DM Satellite Satellite -727 865 1 8 629 304 23 0 23 chrUextra 5823323 5823367 -23181289 + MDG1_I LTR Gypsy 5825 5867 -729 8 629 714 54 222 45 chrUextra 5823373 5823555 -23181101 + MDG1_I LTR Gypsy 6393 6596 0 8 629 372 88 0 0 chrUextra 5823561 5823618 -23181038 + (TAA)n Simple_repeat Simple_repeat 3 59 0 8 629 1872 91 74 3 chrUextra 5823620 5823918 -23180738 + MDG1_LTR LTR Gypsy 94 412 -30 8 629 1234 84 137 8 chrUextra 5823940 5824188 -23180468 + R1-2_DM LINE R1 689 968 -2248 8 629 3389 181 20 23 chrUextra 5824293 5825155 -23179501 - SAR_DM Satellite Satellite -313 1159 301 8 629 1457 291 38 8 chrUextra 5825261 5826115 -23178541 - Invader6_I LTR Gypsy -933 3166 1528 8 629 6259 48 2 13 chrUextra 5826234 5827087 -23177569 + BATUMI_I LTR Pao 2779 3622 -4341 8 629 863 147 0 0 chrUextra 5827189 5827339 -23177317 + HOBO DNA hAT 1487 1636 -1380 8 629 423 203 39 71 chrUextra 5827347 5827501 -23177155 + HOBO DNA hAT 1753 1901 -1115 8 629 1938 109 15 6 chrUextra 5827508 5827832 -23176824 + HOBO DNA hAT 2088 2414 -602 8 629 29 47 0 0 chrUextra 5827837 5827880 -23176776 + AT_rich Low_complexity Low_complexity 1 43 0 8 629 531 81 0 169 chrUextra 5827902 5828050 -23176606 + HOBO DNA hAT 2428 2550 -466 8 629 1515 28 0 0 chrUextra 5828765 5828945 -23175711 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 8 629 645 14 0 0 chrUextra 5828945 5829019 -23175637 + (TTCTC)n Simple_repeat Simple_repeat 2 75 0 8 629 7285 8 2 6 chrUextra 5829119 5829985 -23174671 + CIRCE LINE Composite 1531 2393 -3963 8 629 813 120 2 0 chrUextra 5830087 5830241 -23174415 - ARS406_DM Unknown Unknown -223 130 2 8 629 2957 184 10 24 chrUextra 5830227 5830951 -23173705 + SAR_DM Satellite Satellite 406 1119 -353 8 629 6716 37 38 1 chrUextra 5831051 5831917 -23172739 + R1_DM LINE R1 1121 2018 -3338 8 629 577 154 53 9 chrUextra 5832020 5832363 -23172293 + GA-rich Low_complexity Low_complexity 1 358 0 8 629 6859 34 0 7 chrUextra 5832983 5833849 -23170807 - R1_DM LINE R1 -1932 3424 2565 8 629 5823 25 47 30 chrUextra 5833949 5834497 -23170159 + DM176_I LTR Gypsy 26 551 -5869 8 629 254 50 25 0 chrUextra 5834497 5834537 -23170119 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 8 629 5823 25 47 30 chrUextra 5834537 5834815 -23169841 + DM176_I LTR Gypsy 552 866 -5554 8 629 3518 185 8 12 chrUextra 5834915 5835753 -23168903 - SAR_DM Satellite Satellite -441 1031 197 8 629 625 127 0 17 chrUextra 5835661 5835781 -23168875 + ARS406_DM Unknown Unknown 1 118 -235 8 629 494 135 31 10 chrUextra 5835881 5835978 -23168678 - TIRANT_LTR LTR Gypsy -318 99 1 8 629 965 50 0 92 chrUextra 5836252 5836405 -23168251 - Baggins1 LINE LOA 0 5453 5315 8 629 1699 33 124 0 chrUextra 5836401 5836642 -23168014 - Baggins1 LINE LOA -456 4997 4727 8 629 2382 95 21 21 chrUextra 5836848 5837712 -23166944 + DMSAT6 Satellite Satellite 1 864 -71 8 629 7018 30 0 1 chrUextra 5837813 5838679 -23165977 + R1_DM LINE R1 3768 4632 -724 8 629 3313 192 14 19 chrUextra 5838793 5839644 -23165012 - SAR_DM Satellite Satellite -354 1118 272 8 629 6136 37 113 0 chrUextra 5839746 5840611 -23164045 - DMRT1B LINE R1 -962 4221 3259 8 629 3660 178 9 11 chrUextra 5840711 5841562 -23163094 - SAR_DM Satellite Satellite -443 1029 180 8 629 791 83 0 0 chrUextra 5841456 5841577 -23163079 + ARS406_DM Unknown Unknown 1 121 -232 8 629 3240 184 13 19 chrUextra 5841680 5842543 -23162113 + SAR_DM Satellite Satellite 1 858 -208 8 629 838 322 14 15 chrUextra 5842645 5843238 -23161418 + Gypsy5_I LTR Gypsy 3943 4534 -1975 8 629 2118 23 8 0 chrUextra 5843238 5843499 -23161157 + STALKER4_LTR LTR Gypsy 1 263 -139 8 629 3428 183 19 23 chrUextra 5843609 5844475 -23160181 - SAR_DM Satellite Satellite -264 1208 347 8 629 1208 76 0 3 chrUextra 5845136 5845441 -23159215 + (ATAAG)n Simple_repeat Simple_repeat 1 304 0 8 629 4472 4 0 0 chrUextra 5845541 5846066 -23158590 + G2_DM LINE Jockey 2577 3101 -1 8 629 21 95 0 0 chrUextra 5846263 5846326 -23158330 + AT_rich Low_complexity Low_complexity 1 63 0 8 629 559 0 0 14 chrUextra 5846338 5846407 -23158249 + LSU-rRNA_Dme rRNA rRNA 1 68 -3832 8 629 7309 6 1 0 chrUextra 5846507 5847373 -23157283 - DOC2_DM LINE Jockey -1243 3550 2684 8 629 3335 188 34 20 chrUextra 5847476 5848339 -23156317 + SAR_DM Satellite Satellite 1 874 -242 8 629 242 0 0 0 chrUextra 5848439 5848467 -23156189 - MICROPIA_I LTR Gypsy -4448 28 1 8 629 3930 2 0 61 chrUextra 5848467 5848974 -23155682 - MICROPIA_LTR LTR Gypsy 0 476 1 8 629 550 0 0 0 chrUextra 5848974 5849038 -23155618 + ACCORD2_I LTR Gypsy 1081 1144 -6068 8 629 228 86 0 0 chrUextra 5849038 5849073 -23155583 + (TAA)n Simple_repeat Simple_repeat 2 36 0 8 629 810 64 0 0 chrUextra 5849087 5849197 -23155459 + ACCORD2_I LTR Gypsy 1258 1367 -5845 8 629 2131 231 63 52 chrUextra 5849438 5850234 -23154422 - Gypsy12_LTR LTR Gypsy -962 1374 570 8 629 423 101 0 0 chrUextra 5850370 5850439 -23154217 - ARS406_DM Unknown Unknown -284 69 1 8 629 3122 192 40 18 chrUextra 5850377 5851235 -23153421 + SAR_DM Satellite Satellite 224 1100 -372 8 629 473 18 0 0 chrUextra 5851335 5851391 -23153265 - NTS_DM Other Other -147 93 38 8 629 870 9 0 27 chrUextra 5851391 5851503 -23153153 - NTS_DM Other Other -107 133 25 8 629 21 57 0 0 chrUextra 5851529 5851564 -23153092 + AT_rich Low_complexity Low_complexity 1 35 0 8 629 1252 18 0 6 chrUextra 5851564 5851729 -23152927 - NTS_DM Other Other -39 201 38 8 629 870 9 0 27 chrUextra 5851729 5851841 -23152815 - NTS_DM Other Other -107 133 25 8 629 255 125 0 0 chrUextra 5851916 5851956 -23152700 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 629 246 150 0 0 chrUextra 5851999 5852039 -23152617 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 629 246 150 0 0 chrUextra 5852091 5852131 -23152525 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 629 2782 192 46 15 chrUextra 5852300 5853165 -23151491 - SAR_DM Satellite Satellite -862 891 1 8 629 2473 83 36 39 chrUextra 5853265 5854127 -23150529 + DMSAT6 Satellite Satellite 1 859 -82 8 629 1290 118 135 34 chrUextra 5854233 5854560 -23150096 + MAX_I LTR Pao 194 567 -7347 8 629 1123 84 381 0 chrUextra 5854813 5855073 -23149583 + MAX_I LTR Pao 557 915 -6999 8 629 4543 4 0 0 chrUextra 5855195 5855744 -23148912 - ROVER-I_DM LTR Gypsy -728 5856 5308 8 629 2053 22 0 0 chrUextra 5855793 5856060 -23148596 - ROVER-I_DM LTR Gypsy -1253 5331 5065 8 629 5801 23 1 1 chrUextra 5856160 5856863 -23147793 + R1_DM LINE R1 4654 5356 0 8 629 920 70 8 0 chrUextra 5856896 5857025 -23147631 + R1_DM LINE R1 1 130 -5226 8 629 3980 0 0 0 chrUextra 5857125 5857607 -23147049 - DM297_I LTR Gypsy -480 5687 5206 8 629 3192 5 0 0 chrUextra 5857603 5857990 -23146666 - DM297_I LTR Gypsy -1174 4993 4607 8 629 3603 177 21 13 chrUextra 5858090 5858948 -23145708 - SAR_DM Satellite Satellite -416 1056 192 8 629 3453 65 0 0 chrUextra 5859056 5859516 -23145140 + BS3_DM LINE Jockey 585 1044 -746 8 629 1765 68 0 0 chrUextra 5859506 5859742 -23144914 + BS3_DM LINE Jockey 1311 1546 -244 8 629 1070 71 6 12 chrUextra 5859750 5859920 -23144736 + DM297_I LTR Gypsy 2179 2347 -3820 8 629 348 252 21 36 chrUextra 5860021 5860161 -23144495 - DNAREP1_DM LINE Penelope -306 288 151 8 629 191 88 0 29 chrUextra 5860298 5860333 -23144323 + (CTATA)n Simple_repeat Simple_repeat 2 35 0 8 629 28 29 0 0 chrUextra 5860716 5860751 -23143905 + AT_rich Low_complexity Low_complexity 1 35 0 8 629 2731 9 0 0 chrUextra 5862494 5862815 -23141841 + Copia2_I LTR Copia 152 472 -3690 8 629 5477 5 39 5 chrUextra 5862915 5863780 -23140876 - MICROPIA_I LTR Gypsy -703 3773 2879 8 629 4313 6 68 2 chrUextra 5864845 5865710 -23138946 + DMRT1A LINE R1 1173 2094 -3089 8 629 1173 27 0 0 chrUextra 5865810 5865956 -23138700 - FW_DM LINE Jockey -3052 1640 1495 8 629 1796 9 0 18 chrUextra 5865956 5866175 -23138481 + ACCORD2_LTR LTR Gypsy 1 215 0 8 629 3906 8 10 30 chrUextra 5866175 5866675 -23137981 + ACCORD2_I LTR Gypsy 1 490 -6722 8 629 282 29 0 0 chrUextra 5866908 5866943 -23137713 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 629 502 217 8 8 chrUextra 5866943 5867064 -23137592 + HETRP_DM Satellite Satellite 1549 1669 -203 8 629 681 179 7 14 chrUextra 5867227 5867369 -23137287 + HETRP_DM Satellite Satellite 1529 1669 -203 8 629 246 32 0 0 chrUextra 5867498 5867529 -23137127 + (GA)n Simple_repeat Simple_repeat 2 32 0 8 629 427 211 9 18 chrUextra 5867529 5867640 -23137016 + HETRP_DM Satellite Satellite 1549 1658 -214 8 629 2623 19 0 3 chrUextra 5867740 5868059 -23136597 + QUASIMODO_LTR LTR Gypsy 341 658 0 8 629 4222 23 0 35 chrUextra 5868059 5868605 -23136051 + QUASIMODO_I LTR Gypsy 1 527 -5533 8 629 5101 34 9 0 chrUextra 5868705 5869351 -23135305 - R1_DM LINE R1 -2070 3286 2635 8 629 1764 39 9 0 chrUextra 5869339 5869570 -23135086 - R1_DM LINE R1 -3004 2352 2120 8 629 764 297 48 33 chrUextra 5869678 5870529 -23134127 + SAR_DM Satellite Satellite 1 863 -405 8 629 3607 168 20 24 chrUextra 5870636 5871499 -23133157 + SAR_DM Satellite Satellite 332 1190 -282 8 629 283 50 0 0 chrUextra 5871651 5871691 -23132965 - TLD2 Unknown Unknown 0 218 179 8 629 518 303 22 22 chrUextra 5871694 5872156 -23132500 - ROVER-I_DM LTR Gypsy -3825 3187 2894 8 629 413 333 14 22 chrUextra 5872686 5873078 -23131578 - BURDOCK_I LTR Gypsy -4579 1556 850 8 629 2476 86 34 42 chrUextra 5873530 5874395 -23130261 + DMSAT6 Satellite Satellite 1 857 -141 8 629 1809 59 21 32 chrUextra 5874495 5874775 -23129881 - Gypsy12_I LTR Gypsy -5269 277 1 8 629 302 137 0 0 chrUextra 5874775 5874826 -23129830 - Gypsy12A_LTR LTR Gypsy 0 2336 2286 8 629 328 211 34 34 chrUextra 5874855 5875002 -23129654 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 8 629 998 161 29 10 chrUextra 5875077 5875284 -23129372 - Gypsy12_LTR LTR Gypsy -962 1374 1164 8 629 1598 273 31 26 chrUextra 5875460 5875549 -23129107 + SAR_DM Satellite Satellite 267 844 -628 8 629 2539 67 3 0 chrUextra 5875549 5875909 -23128747 - XDMR Unknown Unknown 0 361 1 8 629 2517 69 3 0 chrUextra 5875909 5876269 -23128387 - XDMR Unknown Unknown 0 361 1 8 629 1598 273 31 26 chrUextra 5876269 5876309 -23128347 + SAR_DM Satellite Satellite 845 1119 -353 8 629 324 42 0 0 chrUextra 5876277 5876325 -23128331 - XDMR Unknown Unknown -24 337 290 8 629 3093 205 12 27 chrUextra 5877394 5878252 -23126404 - SAR_DM Satellite Satellite -216 1256 412 8 629 3018 192 19 20 chrUextra 5878353 5879215 -23125441 - SAR_DM Satellite Satellite -981 860 1 8 629 676 284 94 46 chrUextra 5879456 5880124 -23124532 - ZAM_I LTR Gypsy -1831 5659 4960 8 629 3443 187 14 20 chrUextra 5880281 5881145 -23123511 + SAR_DM Satellite Satellite 352 1210 -262 8 629 3262 176 17 35 chrUextra 5882216 5883036 -23121620 - SAR_DM Satellite Satellite -300 1172 368 8 629 7124 24 0 1 chrUextra 5883173 5884037 -23120619 + R1_DM LINE R1 1588 2450 -2906 8 629 3528 23 0 10 chrUextra 5884137 5884618 -23120038 + Invader2_I LTR Gypsy 4117 4592 0 8 629 1734 70 25 55 chrUextra 5884618 5884892 -23119764 + Invader2_LTR LTR Gypsy 1 266 0 8 629 497 96 0 0 chrUextra 5884925 5884998 -23119658 + HMSBEAGLE_I LTR Gypsy 6219 6291 -238 8 629 332 61 0 20 chrUextra 5885101 5885151 -23119505 - TRANSIB2 DNA Transib -567 2277 2229 8 629 245 224 60 0 chrUextra 5885125 5885192 -23119464 - TRANSIB1 DNA Transib -758 2256 2186 8 629 2598 66 21 66 chrUextra 5885541 5885965 -23118691 - TRANSIB2 DNA Transib -624 2220 1816 8 629 6313 35 31 3 chrUextra 5886065 5886929 -23117727 - IDEFIX_I LTR Gypsy -703 4925 4038 8 629 183 100 0 0 chrUextra 5887040 5887070 -23117586 + (TAA)n Simple_repeat Simple_repeat 3 32 0 8 629 1842 98 74 3 chrUextra 5887072 5887370 -23117286 + MDG1_LTR LTR Gypsy 94 412 -30 8 629 1297 20 0 0 chrUextra 5887370 5887523 -23117133 + R1_DM LINE R1 5202 5354 -2 8 629 2373 69 6 6 chrUextra 5887558 5887893 -23116763 + R1_DM LINE R1 1 335 -5021 8 629 748 0 0 21 chrUextra 5887993 5888090 -23116566 + BATUMI_I LTR Pao 7869 7963 0 8 629 2194 45 0 34 chrUextra 5888090 5888383 -23116273 + BATUMI_I LTR Pao 7002 7284 -679 8 629 4097 179 8 9 chrUextra 5888957 5889810 -23114846 - SAR_DM Satellite Satellite -426 1046 195 8 629 725 96 0 0 chrUextra 5889717 5889821 -23114835 + ARS406_DM Unknown Unknown 1 104 -249 8 629 3984 185 10 9 chrUextra 5889921 5890785 -23113871 - SAR_DM Satellite Satellite -396 1076 212 8 629 3666 189 14 20 chrUextra 5890885 5891749 -23112907 + SAR_DM Satellite Satellite 1 859 -216 8 629 1336 85 48 0 chrUextra 5891849 5892037 -23112619 + DMRT1C LINE R1 2041 2237 -3206 8 629 447 32 143 0 chrUextra 5892037 5892100 -23112556 + DMRT1C LINE R1 2177 2248 -3195 8 629 803 81 0 9 chrUextra 5892104 5892216 -23112440 + DMRT1C LINE R1 3628 3738 -1705 8 629 3679 61 40 12 chrUextra 5892212 5892713 -23111943 + DMRT1C LINE R1 4002 4516 -927 8 629 260 20 19 58 chrUextra 5893778 5893830 -23110826 + NTS_DM Other Other 113 162 -78 8 629 992 256 81 31 chrUextra 5894186 5894641 -23110015 + G6_DM LINE Jockey 243 720 -1322 8 629 3335 169 108 31 chrUextra 5894741 5895604 -23109052 - TART LINE telomeric -4101 10376 9487 8 629 966 71 14 14 chrUextra 5895705 5895848 -23108808 - DMCR1A LINE CR1 -4326 144 2 8 629 32 26 0 0 chrUextra 5895850 5895889 -23108767 + AT_rich Low_complexity Low_complexity 1 39 0 8 629 738 0 112 0 chrUextra 5895889 5896140 -23108516 + (TTA)n Simple_repeat Simple_repeat 1 279 0 8 629 189 230 0 0 chrUextra 5896188 5896262 -23108394 + (TTAA)n Simple_repeat Simple_repeat 1 74 0 8 629 22 35 0 0 chrUextra 5896401 5896430 -23108226 + AT_rich Low_complexity Low_complexity 1 29 0 8 629 5652 61 67 17 chrUextra 5896669 5897533 -23107123 - STALKER4_I LTR Gypsy -4892 1638 732 8 78 7713 2 22 2 chrUextra 5897633 5898497 -23106159 + DM176_I LTR Gypsy 3502 4382 -2038 8 630 1620 4 0 0 chrUextra 5898599 5898871 -23105785 + (GAGAA)n Simple_repeat Simple_repeat 1 272 0 8 630 2369 122 20 12 chrUextra 5899567 5900419 -23104237 + DMSAT6 Satellite Satellite 1 859 -74 8 630 5808 11 0 16 chrUextra 5900543 5901213 -23103443 - PROTOP_A DNA P 0 1105 447 8 630 1371 30 6 6 chrUextra 5901221 5901388 -23103268 - PROTOP_A DNA P -778 327 161 8 630 2664 0 3 0 chrUextra 5901488 5901778 -23102878 + R1_DM LINE R1 5066 5356 0 8 630 3560 7 229 2 chrUextra 5901785 5902239 -23102417 + R1_DM LINE R1 4800 5356 0 8 630 1053 9 0 0 chrUextra 5902237 5902351 -23102305 + LSU-rRNA_Dme rRNA rRNA 2640 2753 -1147 8 630 931 88 7 0 chrUextra 5903414 5903551 -23101105 - ARS406_DM Unknown Unknown -215 138 1 8 630 3865 176 19 11 chrUextra 5903433 5904277 -23100379 + SAR_DM Satellite Satellite 167 1017 -455 8 630 7709 12 0 0 chrUextra 5904377 5905240 -23099416 - DMRT1B LINE R1 -160 5023 4161 8 630 3082 57 123 54 chrUextra 5905723 5906203 -23098453 - TRANSIB2 DNA Transib -624 2220 1708 8 630 521 59 129 0 chrUextra 5906311 5906396 -23098260 - MAX_I LTR Pao -6999 915 820 8 630 529 93 230 14 chrUextra 5906407 5906546 -23098110 - MAX_I LTR Pao -7189 725 557 8 630 4206 25 4 2 chrUextra 5906551 5907032 -23097624 + Gypsy_LTR LTR Gypsy 1 482 0 8 630 1236 7 0 0 chrUextra 5907030 5907166 -23097490 + Gypsy_I LTR Gypsy 1 136 -6371 8 630 1566 29 0 2 chrUextra 5907266 5908129 -23096527 + (TCTA)n Simple_repeat Simple_repeat 1 861 0 8 630 5188 10 3 2 chrUextra 5908229 5908808 -23095848 - FW_DM LINE Jockey -732 3960 3381 8 630 2403 0 0 4 chrUextra 5908832 5909092 -23095564 - STALKER4_LTR LTR Gypsy 0 402 144 8 630 826 30 0 0 chrUextra 5909192 5909292 -23095364 + IDEFIX_I LTR Gypsy 182 281 -5347 8 630 7227 75 44 11 chrUextra 5909292 5911015 -23093641 + IDEFIX_I LTR Gypsy 1605 3427 -2201 8 630 5998 101 25 12 chrUextra 5911118 5911981 -23092675 + Gypsy12_I LTR Gypsy 1577 2451 -3095 8 630 6809 40 28 1 chrUextra 5912085 5912944 -23091712 - R1_DM LINE R1 -4010 1346 465 8 630 3915 178 13 22 chrUextra 5913044 5913907 -23090749 - SAR_DM Satellite Satellite -315 1157 303 8 630 5501 8 2 0 chrUextra 5914007 5914611 -23090045 + IVK_DM LINE I 4798 5402 0 8 630 262 305 25 44 chrUextra 5914584 5914858 -23089798 + QUASIMODO_I LTR Gypsy 5662 5930 -130 8 630 2717 0 0 0 chrUextra 5914970 5915271 -23089385 + FW_DM LINE Jockey 4392 4692 0 8 630 459 262 97 16 chrUextra 5915450 5915636 -23089020 - QUASIMODO_I LTR Gypsy -4388 1672 1472 8 630 262 247 0 0 chrUextra 5915722 5915795 -23088861 - QUASIMODO_I LTR Gypsy -4694 1366 1294 8 630 7386 36 0 0 chrUextra 5915933 5916796 -23087860 - R1_DM LINE R1 -2571 2785 1923 8 630 2554 89 0 52 chrUextra 5916896 5917759 -23086897 - DMSAT6 Satellite Satellite -99 817 1 8 630 4089 174 13 11 chrUextra 5917865 5918717 -23085939 + SAR_DM Satellite Satellite 180 1033 -439 8 630 3413 195 35 13 chrUextra 5918822 5919660 -23084996 - SAR_DM Satellite Satellite -321 1151 296 8 630 1713 310 28 28 chrUextra 5919789 5920618 -23084038 + ROVER-I_DM LTR Gypsy 1054 1882 -4702 8 630 7488 23 1 0 chrUextra 5920748 5921611 -23083045 - DMRT1B LINE R1 -2234 2949 2086 8 630 5919 65 56 6 chrUextra 5921715 5922572 -23082084 + TART LINE telomeric 2275 3174 -11303 8 630 7018 36 37 6 chrUextra 5922674 5923537 -23081119 + Baggins1 LINE LOA 903 1792 -3661 8 630 2430 114 7 33 chrUextra 5923641 5924500 -23080156 - DMSAT6 Satellite Satellite -196 836 1 8 630 2701 35 3 0 chrUextra 5925148 5925463 -23079193 - DIVER2_LTR LTR Pao 0 385 70 8 630 2470 185 19 8 chrUextra 5925563 5926426 -23078230 + SAR_DM Satellite Satellite 1 872 -203 8 630 714 134 34 0 chrUextra 5926526 5926645 -23078011 + DM176_I LTR Gypsy 6298 6420 0 8 630 611 188 45 57 chrUextra 5926869 5927079 -23077577 + DMTOM1_LTR LTR Gypsy 284 488 -19 8 630 426 100 14 28 chrUextra 5927070 5927142 -23077514 + DMTOM1_LTR LTR Gypsy 340 410 0 8 630 221 167 0 18 chrUextra 5927308 5927363 -23077293 + (TAA)n Simple_repeat Simple_repeat 1 54 0 8 630 2527 124 14 17 chrUextra 5927491 5928352 -23076304 - DMSAT6 Satellite Satellite -37 857 1 8 630 5650 39 136 48 chrUextra 5930392 5931238 -23073418 - BATUMI_I LTR Pao -4489 3474 2555 8 630 1224 107 68 186 chrUextra 5931338 5931661 -23072995 + Invader1_I LTR Gypsy 2902 3186 0 8 630 2602 109 44 19 chrUextra 5931662 5932074 -23072582 + Invader1_LTR LTR Gypsy 2 423 0 8 630 1499 131 2 35 chrUextra 5932302 5932582 -23072074 + Gypsy12_I LTR Gypsy 365 693 -4853 8 630 4078 83 116 13 chrUextra 5932566 5933162 -23071494 + Gypsy12_I LTR Gypsy 4395 5051 -495 8 630 1723 148 3 0 chrUextra 5934229 5934520 -23070136 - Gypsy5_I LTR Gypsy -1527 4982 4691 8 630 3469 147 14 0 chrUextra 5934531 5935081 -23069575 - Gypsy5_I LTR Gypsy -2234 4275 3718 8 630 664 38 0 0 chrUextra 5935186 5935265 -23069391 - DM176_I LTR Gypsy -6341 79 1 8 630 3705 19 47 91 chrUextra 5935265 5935795 -23068861 - DM176_LTR LTR Gypsy 0 507 1 8 630 618 208 59 71 chrUextra 5935810 5936048 -23068608 - QUASIMODO_LTR LTR Gypsy 0 658 424 8 630 6988 47 27 0 chrUextra 5936148 5937007 -23067649 - TART LINE telomeric -12214 2263 1382 8 630 993 6 0 119 chrUextra 5937112 5937513 -23067143 + (CACAA)n Simple_repeat Simple_repeat 1 353 0 8 630 4002 9 0 0 chrUextra 5937526 5937972 -23066684 + DMRT1B LINE R1 1328 1773 -3410 8 630 2878 3 0 0 chrUextra 5939996 5940317 -23064339 - QUASIMODO_LTR LTR Gypsy -335 323 3 8 630 225 53 102 51 chrUextra 5940317 5940376 -23064280 + (TATAG)n Simple_repeat Simple_repeat 2 63 0 8 630 206 203 94 6 chrUextra 5940514 5940673 -23063983 + (TA)n Simple_repeat Simple_repeat 2 174 0 8 630 343 178 72 18 chrUextra 5940686 5940852 -23063804 + (TA)n Simple_repeat Simple_repeat 2 176 0 8 630 22 35 0 0 chrUextra 5941155 5941184 -23063472 + AT_rich Low_complexity Low_complexity 1 29 0 8 630 7544 22 1 0 chrUextra 5941920 5942782 -23061874 + R1_DM LINE R1 4099 4961 -395 8 630 1596 37 0 0 chrUextra 5942882 5943070 -23061586 - BATUMI_I LTR Pao -3082 4881 4694 8 630 915 295 0 0 chrUextra 5943071 5943315 -23061341 - MAX_I LTR Pao -3275 4639 4396 8 630 3599 54 0 0 chrUextra 5943315 5943744 -23060912 - BATUMI_I LTR Pao -3885 4078 3650 8 630 1316 295 36 42 chrUextra 5943857 5944689 -23059967 + SAR_DM Satellite Satellite 294 1120 -352 8 630 439 165 11 11 chrUextra 5944613 5944705 -23059951 - XDMR_DM Unknown Unknown -10 350 259 8 630 4037 188 6 6 chrUextra 5944807 5945638 -23059018 + SAR_DM Satellite Satellite 246 1076 -396 8 630 237 175 15 31 chrUextra 5945603 5945668 -23058988 - XDMR_DM Unknown Unknown 0 360 297 8 630 1620 4 0 0 chrUextra 5946353 5946630 -23058026 + (CTTAT)n Simple_repeat Simple_repeat 1 277 0 8 630 3185 201 47 14 chrUextra 5947692 5948554 -23056102 - SAR_DM Satellite Satellite -494 890 1 8 630 1884 25 4 59 chrUextra 5948717 5948971 -23055685 - ALUII_DM Unknown Unknown 0 240 1 8 630 21 57 0 0 chrUextra 5948971 5949006 -23055650 + AT_rich Low_complexity Low_complexity 1 35 0 8 630 22 35 0 0 chrUextra 5949203 5949232 -23055424 + AT_rich Low_complexity Low_complexity 1 29 0 8 630 37 39 0 0 chrUextra 5949333 5949384 -23055272 + AT_rich Low_complexity Low_complexity 1 51 0 8 630 7488 24 0 0 chrUextra 5950578 5951439 -23053217 + HETA LINE telomeric 2283 3143 -2938 8 630 4896 19 55 0 chrUextra 5951539 5952400 -23052256 + DOC2_DM LINE Jockey 1034 1941 -2852 8 630 7381 19 14 0 chrUextra 5952500 5953361 -23051295 + ROO_I LTR Pao 761 1633 -6623 8 630 7563 11 0 2 chrUextra 5953461 5954322 -23050334 - STALKER4_I LTR Gypsy -4390 2140 1282 8 630 7398 24 30 0 chrUextra 5954423 5955283 -23049373 + R1_DM LINE R1 1501 2386 -2970 8 630 3950 189 7 15 chrUextra 5955384 5956244 -23048412 - SAR_DM Satellite Satellite -369 1103 251 8 630 2298 176 16 11 chrUextra 5957305 5957748 -23046908 - TAHRE LINE telomeric -40 10423 9979 8 630 2257 124 16 14 chrUextra 5957753 5958122 -23046534 - TAHRE LINE telomeric -19 10444 10075 8 630 3786 179 18 21 chrUextra 5958279 5959124 -23045532 + SAR_DM Satellite Satellite 369 1210 -262 8 630 665 50 0 0 chrUextra 5959227 5959307 -23045349 - R1_DM LINE R1 -3960 1396 1317 8 630 5786 46 1 63 chrUextra 5959305 5960087 -23044569 - R1_DM LINE R1 -3528 1828 1095 8 630 7243 22 19 3 chrUextra 5960188 5961049 -23043607 + R1_DM LINE R1 3801 4674 -682 8 630 7693 12 0 1 chrUextra 5961149 5962010 -23042646 + DMRT1A LINE R1 2582 3441 -1742 8 630 2709 205 51 52 chrUextra 5962168 5962971 -23041685 + TAHRE LINE telomeric 6944 7745 -2718 8 630 1548 12 0 0 chrUextra 5963071 5963240 -23041416 - Invader2_LTR LTR Gypsy -97 169 1 8 630 5769 10 0 10 chrUextra 5963240 5963932 -23040724 - Invader2_I LTR Gypsy 0 4592 3908 8 630 6725 38 1 15 chrUextra 5964032 5964888 -23039768 - R1_DM LINE R1 -4074 1282 439 8 630 3606 42 38 0 chrUextra 5964993 5965671 -23038985 + PROTOP_A DNA P 390 1153 0 8 630 328 85 0 0 chrUextra 5965671 5965718 -23038938 + PROTOP_A DNA P 420 466 -639 8 630 592 67 217 0 chrUextra 5965733 5965853 -23038803 + PROTOP_B DNA P 554 699 -454 8 630 3788 191 7 18 chrUextra 5965956 5966815 -23037841 - SAR_DM Satellite Satellite -361 1111 262 8 630 1689 42 51 5 chrUextra 5966915 5967129 -23037527 + Baggins1 LINE LOA 5230 5453 0 8 630 356 7 227 0 chrUextra 5967633 5967774 -23036882 + (ATATG)n Simple_repeat Simple_repeat 2 174 0 8 630 1473 17 0 0 chrUextra 5968010 5968182 -23036474 + (TAA)n Simple_repeat Simple_repeat 2 173 0 8 630 1792 5 0 0 chrUextra 5968182 5968380 -23036276 - Copia2_LTR_DM LTR Copia 0 198 1 8 630 3144 11 0 0 chrUextra 5968380 5968737 -23035919 - Copia2_I LTR Copia 0 4162 3806 8 630 359 315 24 24 chrUextra 5968952 5969118 -23035538 - BLASTOPIA_I LTR Gypsy -775 3706 3541 8 630 377 288 18 35 chrUextra 5969450 5969619 -23035037 - MDG3_I LTR Gypsy -1558 3428 3263 8 630 7341 27 19 0 chrUextra 5969798 5970659 -23033997 - R1_DM LINE R1 -1770 3586 2710 8 630 232 203 51 0 chrUextra 5970893 5970952 -23033704 - DMRT1C LINE R1 -1261 4182 4121 8 630 2391 89 115 11 chrUextra 5971109 5971482 -23033174 - MDG1_LTR LTR Gypsy -30 412 1 8 630 432 56 0 0 chrUextra 5971482 5971535 -23033121 + DOC5_DM LINE Jockey 3927 3979 -703 8 630 680 22 0 11 chrUextra 5971530 5971620 -23033036 + DOC5_DM LINE Jockey 4180 4268 -414 8 630 461 0 16 0 chrUextra 5971720 5971782 -23032874 + TART LINE telomeric 14415 14477 0 8 630 3108 24 0 8 chrUextra 5971781 5972161 -23032495 + TART LINE telomeric 14101 14477 0 8 630 3010 83 9 0 chrUextra 5972161 5972581 -23032075 + TART_B1 LINE telomeric 1171 1594 -9060 8 630 5225 94 73 38 chrUextra 5972681 5973541 -23031115 - Gypsy12_I LTR Gypsy -4374 1172 283 8 630 7495 24 9 0 chrUextra 5973644 5974503 -23030153 - STALKER4_I LTR Gypsy -1740 4790 3924 8 630 7168 26 55 1 chrUextra 5974603 5975464 -23029192 - R1_DM LINE R1 -2344 3012 2106 8 630 2387 123 15 17 chrUextra 5975564 5976424 -23028232 + DMSAT6 Satellite Satellite 1 858 -69 8 630 3656 191 18 26 chrUextra 5976525 5977376 -23027280 + SAR_DM Satellite Satellite 412 1255 -217 8 630 760 81 0 0 chrUextra 5977287 5977386 -23027270 - ARS406_DM Unknown Unknown -164 189 91 8 630 7449 8 28 0 chrUextra 5977486 5978347 -23026309 + Invader2_I LTR Gypsy 3236 4120 -472 8 630 2486 94 29 26 chrUextra 5978448 5979304 -23025352 - DMSAT6 Satellite Satellite -17 858 1 8 630 2685 88 30 8 chrUextra 5979408 5980269 -23024387 + DMSAT6 Satellite Satellite 1 880 -48 8 630 2608 92 31 14 chrUextra 5980369 5981229 -23023427 - DMSAT6 Satellite Satellite -84 875 1 8 630 4017 185 7 12 chrUextra 5981330 5982190 -23022466 + SAR_DM Satellite Satellite 212 1067 -405 8 630 4021 187 8 8 chrUextra 5982290 5983149 -23021507 - SAR_DM Satellite Satellite -396 1076 218 8 630 699 23 0 120 chrUextra 5983250 5983350 -23021306 + LSU-rRNA_Dme rRNA rRNA 2562 2649 -1251 8 630 2897 9 0 0 chrUextra 5983352 5983670 -23020986 + R1_DM LINE R1 5039 5356 0 8 630 3968 14 0 2 chrUextra 5983668 5984110 -23020546 + LSU-rRNA_Dme rRNA rRNA 2640 3080 -820 8 630 3825 191 21 16 chrUextra 5984210 5985068 -23019588 + SAR_DM Satellite Satellite 1 862 -242 8 630 265 61 0 0 chrUextra 5985170 5985203 -23019453 - LSU-rRNA_Dme rRNA rRNA -1228 2672 2640 8 630 3588 10 0 2 chrUextra 5985201 5985601 -23019055 - R1_DM LINE R1 0 5356 4958 8 630 3990 0 0 11 chrUextra 5985591 5986030 -23018626 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2223 8 630 2907 0 3 6 chrUextra 5986130 5986452 -23018204 - HOBO DNA hAT -2695 321 1 8 630 25 31 0 0 chrUextra 5986684 5986716 -23017940 + AT_rich Low_complexity Low_complexity 1 32 0 8 630 750 189 30 0 chrUextra 5988050 5988214 -23016442 - SAR_DM Satellite Satellite -719 753 585 8 630 624 128 36 43 chrUextra 5988212 5988351 -23016305 - FB4_DM DNA Tc1 -1089 3000 2863 8 630 444 173 30 52 chrUextra 5988234 5988368 -23016288 + FB4_DM DNA Tc1 684 814 -3275 8 630 443 82 0 0 chrUextra 5988326 5988387 -23016269 - FB4_DM DNA Tc1 -4027 62 2 8 630 1293 153 77 2 chrUextra 5988423 5988847 -23015809 - SAR_DM Satellite Satellite -658 455 1 8 630 4951 75 3 31 chrUextra 5989010 5989803 -23014853 + STALKER4_I LTR Gypsy 5407 6129 -467 8 630 528 0 0 0 chrUextra 5989813 5989870 -23014786 + PROTOP_B DNA P 1 57 -1096 8 630 2364 0 0 19 chrUextra 5989970 5990235 -23014421 + HOBO DNA hAT 2757 3016 0 8 630 7916 6 0 0 chrUextra 5990930 5991790 -23012866 + Invader3_I LTR Gypsy 1203 2062 -2826 8 630 2352 128 9 47 chrUextra 5991890 5992750 -23011906 - DMSAT6 Satellite Satellite -32 827 1 8 630 3877 179 16 11 chrUextra 5992850 5993685 -23010971 - SAR_DM Satellite Satellite -454 1018 180 8 630 887 99 0 0 chrUextra 5993579 5993710 -23010946 + ARS406_DM Unknown Unknown 1 131 -222 8 630 27 29 0 0 chrUextra 5994100 5994134 -23010522 + AT_rich Low_complexity Low_complexity 1 34 0 8 630 670 93 41 0 chrUextra 5994373 5994470 -23010186 + Baggins1 LINE LOA 4727 4827 -626 8 630 813 105 229 0 chrUextra 5994463 5994616 -23010040 - FB4_DM DNA Tc1 -3899 190 3 8 630 3753 203 8 11 chrUextra 5994772 5995627 -23009029 + SAR_DM Satellite Satellite 195 1047 -425 8 630 6733 41 24 12 chrUextra 5995730 5996590 -23008066 - R1_DM LINE R1 -4064 1292 422 8 630 613 182 30 49 chrUextra 5996690 5996880 -23007776 - DMRT1B LINE R1 -4913 270 1 8 630 4998 23 0 0 chrUextra 5996978 5997550 -23007106 + R1_DM LINE R1 4592 5163 -193 8 630 3436 196 25 28 chrUextra 5997652 5998509 -23006147 - SAR_DM Satellite Satellite -219 1253 400 8 630 3652 11 0 2 chrUextra 5998610 5999054 -23005602 + DM176_I LTR Gypsy 5942 6384 -36 8 630 3259 20 12 35 chrUextra 5999066 5999470 -23005186 + DM176_LTR LTR Gypsy 89 483 -24 8 630 3991 2 0 0 chrUextra 5999570 6000000 -23004656 + LSU-rRNA_Dme rRNA rRNA 2001 2430 -1470 8 630 1126 5 197 0 chrUextra 6000000 6000183 -23004473 + LSU-rRNA_Dme rRNA rRNA 2431 2649 -1251 8 630 2224 12 0 0 chrUextra 6000185 6000430 -23004226 + R1_DM LINE R1 5039 5283 -73 8 630 21 0 0 0 chrUextra 6000731 6000752 -23003904 + AT_rich Low_complexity Low_complexity 1 21 0 8 630 3613 190 19 23 chrUextra 6001492 6002345 -23002311 + SAR_DM Satellite Satellite 369 1217 -255 8 630 2446 108 13 35 chrUextra 6002472 6003310 -23001346 - DMSAT6 Satellite Satellite -3 819 1 8 630 2780 201 40 70 chrUextra 6003411 6004225 -23000431 - TART_B1 LINE telomeric -9067 1587 798 8 630 3635 178 47 20 chrUextra 6004373 6005229 -22999427 - SAR_DM Satellite Satellite -242 1230 352 8 630 2284 309 42 13 chrUextra 6005330 6006190 -22998466 - MICROPIA_I LTR Gypsy -881 3595 2711 8 630 7530 30 0 0 chrUextra 6006290 6007150 -22997506 - STALKER4_I LTR Gypsy -1896 4634 3775 8 630 3390 201 15 17 chrUextra 6007250 6008110 -22996546 - SAR_DM Satellite Satellite -504 858 1 8 630 1281 342 15 20 chrUextra 6008457 6009069 -22995587 - MICROPIA_I LTR Gypsy -583 3893 3285 8 630 3873 38 4 2 chrUextra 6009171 6009876 -22994780 - R1_DM LINE R1 -2224 3132 2394 8 630 1336 20 7 0 chrUextra 6009878 6010030 -22994626 - R1_DM LINE R1 -3291 2065 1913 8 630 3427 3 0 0 chrUextra 6010130 6010497 -22994159 - MICROPIA_I LTR Gypsy -4109 367 1 8 630 4437 0 0 2 chrUextra 6010497 6010974 -22993682 - MICROPIA_LTR LTR Gypsy 0 476 1 8 630 4950 65 19 8 chrUextra 6011089 6011736 -22992920 + R1_DM LINE R1 1584 2237 -3119 8 630 674 42 219 0 chrUextra 6011817 6011913 -22992743 - Gypsy6A_LTR LTR Gypsy -233 187 71 8 630 3658 60 30 10 chrUextra 6012048 6012540 -22992116 - TART LINE telomeric -13745 732 231 8 630 589 311 28 16 chrUextra 6012609 6012864 -22991792 - Copia_I LTR Copia -3928 665 408 8 630 249 48 47 23 chrUextra 6012864 6012907 -22991749 - BATUMI_LTR LTR Pao 0 272 229 8 630 732 0 0 12 chrUextra 6013007 6013092 -22991564 - MDG1_LTR LTR Gypsy -272 170 87 8 630 423 100 0 0 chrUextra 6013092 6013162 -22991494 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 630 2404 137 28 29 chrUextra 6013966 6014825 -22989831 + DMSAT6 Satellite Satellite 1 858 -18 8 630 5431 0 0 0 chrUextra 6014925 6015518 -22989138 + FW_DM LINE Jockey 4100 4692 0 8 630 1432 118 34 11 chrUextra 6015519 6015784 -22988872 - DMSAT6 Satellite Satellite -116 354 84 8 630 363 0 0 0 chrUextra 6015884 6015925 -22988731 - PROTOP_B DNA P -1112 41 1 8 630 4936 34 83 2 chrUextra 6015925 6016743 -22987913 + Copia2_I LTR Copia 940 1824 -2338 8 630 4308 20 2 25 chrUextra 6016843 6017366 -22987290 - ROO_I LTR Pao -7745 511 1 8 630 2830 27 60 0 chrUextra 6017366 6017702 -22986954 - ROO_LTR LTR Pao 0 428 73 8 630 271 354 32 36 chrUextra 6017884 6018136 -22986520 + ZAM_I LTR Gypsy 2496 2746 -4744 8 630 1281 68 8 4 chrUextra 6019091 6019344 -22985312 + (TATTG)n Simple_repeat Simple_repeat 1 254 0 8 630 3750 176 21 25 chrUextra 6019722 6020579 -22984077 - SAR_DM Satellite Satellite -318 1154 301 8 630 2216 39 18 18 chrUextra 6020679 6020965 -22983691 + NINJA_I LTR Pao 2562 2847 -3164 8 630 5074 25 22 0 chrUextra 6020942 6021538 -22983118 + NINJA_I LTR Pao 3999 4607 -1404 8 630 8028 2 0 0 chrUextra 6021638 6022497 -22982159 + TART_B1 LINE telomeric 137 995 -9659 8 630 7614 14 11 0 chrUextra 6022597 6023456 -22981200 - DOC2_DM LINE Jockey -998 3795 2928 8 630 29 60 0 0 chrUextra 6024071 6024121 -22980535 + AT_rich Low_complexity Low_complexity 1 50 0 8 630 509 112 112 0 chrUextra 6024237 6024326 -22980330 + DNAREP1_DM LINE Penelope 496 594 0 8 630 21 57 0 0 chrUextra 6024380 6024415 -22980241 + AT_rich Low_complexity Low_complexity 1 35 0 8 630 2099 182 9 8 chrUextra 6024515 6025370 -22979286 + SAR_DM Satellite Satellite 1 855 -558 8 630 2464 112 6 33 chrUextra 6025474 6026333 -22978323 + DMSAT6 Satellite Satellite 1 835 -159 8 630 4996 19 15 89 chrUextra 6026433 6027119 -22977537 + LSU-rRNA_Dme rRNA rRNA 1633 2267 -1633 8 630 975 53 17 0 chrUextra 6027117 6027292 -22977364 + R2_DM LINE R2 805 1084 -2523 8 630 7896 5 0 0 chrUextra 6027392 6028251 -22976405 - MICROPIA_I LTR Gypsy -152 4324 3466 8 630 1824 115 75 48 chrUextra 6028361 6028798 -22975858 + BATUMI_I LTR Pao 321 769 -7194 8 630 1593 139 16 67 chrUextra 6028839 6029210 -22975446 + BATUMI_I LTR Pao 749 1100 -6863 8 78 7397 6 0 19 chrUextra 6029310 6030169 -22974487 + IDEFIX_I LTR Gypsy 550 1392 -4236 8 631 4150 19 2 4 chrUextra 6030269 6030744 -22973912 - R1_DM LINE R1 -2945 2411 1938 8 631 1921 54 0 4 chrUextra 6030728 6030971 -22973685 - R1_DM LINE R1 -4741 615 374 8 631 1218 64 6 0 chrUextra 6030972 6031128 -22973528 - R1_DM LINE R1 -5101 255 99 8 631 2284 34 0 0 chrUextra 6031229 6031492 -22973164 + DIVER_I LTR Pao 5381 5643 0 8 631 1293 107 0 118 chrUextra 6031492 6031746 -22972910 + DIVER_LTR LTR Pao 1 224 0 8 631 3136 37 3 0 chrUextra 6032187 6032568 -22972088 - IDEFIX_I LTR Gypsy -3057 2571 2190 8 631 3542 46 11 4 chrUextra 6032585 6033046 -22971610 - IDEFIX_I LTR Gypsy -4764 864 401 8 631 3254 175 53 19 chrUextra 6033328 6034005 -22970651 + STALKER4_I LTR Gypsy 1044 1743 -4787 8 631 4121 2 0 19 chrUextra 6034105 6034570 -22970086 - FW_DM LINE Jockey -3771 921 466 8 631 948 53 0 0 chrUextra 6034850 6034964 -22969692 + IDEFIX_I LTR Gypsy 1 114 -5514 8 631 2247 34 3 51 chrUextra 6035064 6035378 -22969278 - Gypsy7_I LTR Gypsy -4685 299 1 8 631 1891 76 0 12 chrUextra 6035378 6035631 -22969025 - Gypsy7_LTR LTR Gypsy 0 251 2 8 631 940 28 0 0 chrUextra 6035631 6035737 -22968919 - Gypsy7_I LTR Gypsy 0 4984 4879 8 631 576 67 11 11 chrUextra 6035832 6035922 -22968734 - Gypsy7_I LTR Gypsy -109 4875 4786 8 631 3119 40 3 3 chrUextra 6036023 6036396 -22968260 - R1_DM LINE R1 -3883 1473 1101 8 631 3911 62 2 4 chrUextra 6036395 6036882 -22967774 - R1_DM LINE R1 -4739 617 132 8 631 7578 15 36 0 chrUextra 6036982 6037841 -22966815 + R1_DM LINE R1 1692 2581 -2775 8 631 1301 73 54 6 chrUextra 6037941 6038199 -22966457 - DM176_I LTR Gypsy -1802 4618 4473 8 631 5251 5 5 0 chrUextra 6038197 6038798 -22965858 - DM176_I LTR Gypsy -4063 2357 1754 8 631 621 315 92 45 chrUextra 6039375 6039757 -22964899 + Gypsy6_I LTR Gypsy 2943 3358 -3214 8 631 2433 116 3 0 chrUextra 6039860 6040213 -22964443 - DMRT1B LINE R1 -1696 3487 3134 8 631 572 273 67 0 chrUextra 6040244 6040409 -22964247 + Gypsy12_I LTR Gypsy 3154 3329 -2217 8 631 6784 38 6 0 chrUextra 6040818 6041677 -22962979 - IDEFIX_I LTR Gypsy -291 5337 4474 8 631 2807 94 163 5 chrUextra 6041794 6042243 -22962413 - TART LINE telomeric -6799 7678 7159 8 631 1959 119 10 3 chrUextra 6042241 6042537 -22962119 - TART LINE telomeric -7446 7031 6734 8 631 3653 184 9 20 chrUextra 6042745 6043586 -22961070 + SAR_DM Satellite Satellite 287 1118 -354 8 631 306 188 0 0 chrUextra 6043531 6043595 -22961061 - XDMR Unknown Unknown 0 361 298 8 631 3599 189 12 20 chrUextra 6043701 6044554 -22960102 - SAR_DM Satellite Satellite -514 845 1 8 631 3697 180 16 21 chrUextra 6044654 6045512 -22959144 + SAR_DM Satellite Satellite 293 1146 -326 8 631 849 78 0 0 chrUextra 6045617 6045733 -22958923 - Jockey2 LINE Jockey -1894 1534 1419 8 631 778 148 30 61 chrUextra 6046224 6046389 -22958267 - Gypsy5_LTR LTR Gypsy -194 236 77 8 631 603 76 0 0 chrUextra 6046393 6046472 -22958184 - Jockey2 LINE Jockey -3346 82 4 8 631 6817 14 7 56 chrUextra 6046572 6047431 -22957225 - LSU-rRNA_Dme rRNA rRNA -1979 1921 1105 8 631 3414 16 3 0 chrUextra 6048007 6048389 -22956267 - DMRT1A LINE R1 -102 5081 4699 8 631 2534 101 8 42 chrUextra 6048497 6049347 -22955309 - DMSAT6 Satellite Satellite -64 821 1 8 631 7549 23 9 0 chrUextra 6049447 6050305 -22954351 + R1_DM LINE R1 1806 2671 -2685 8 631 2494 98 40 33 chrUextra 6050405 6051263 -22953393 - DMSAT6 Satellite Satellite -82 864 1 8 631 2882 171 14 31 chrUextra 6051365 6052221 -22952435 - SAR_DM Satellite Satellite -715 841 1 8 631 392 114 124 11 chrUextra 6052351 6052440 -22952216 - DNAREP1_DM LINE Penelope -439 155 57 8 631 403 156 111 0 chrUextra 6052515 6052605 -22952051 - DNAREP1_DM LINE Penelope -439 155 56 8 631 291 116 0 0 chrUextra 6052735 6052778 -22951878 + HETRP_DM Satellite Satellite 1518 1560 -312 8 631 278 105 0 0 chrUextra 6052826 6052864 -22951792 + HETRP_DM Satellite Satellite 1668 1705 -167 8 631 392 114 124 11 chrUextra 6052982 6053071 -22951585 - DNAREP1_DM LINE Penelope -439 155 57 8 631 535 116 0 140 chrUextra 6054243 6054393 -22950263 - ROVER-I_DM LTR Gypsy -6279 305 177 8 631 967 224 60 11 chrUextra 6054409 6054693 -22949963 + QUASIMODO_I LTR Gypsy 4961 5258 -802 8 631 792 236 93 14 chrUextra 6054694 6055050 -22949606 + QUASIMODO_I LTR Gypsy 5480 5863 -197 8 631 7318 33 1 0 chrUextra 6055195 6056053 -22948603 - R1_DM LINE R1 -2162 3194 2336 8 631 7181 1 57 1 chrUextra 6056153 6057009 -22947647 - ROO_I LTR Pao -7128 1128 225 8 631 1813 9 50 0 chrUextra 6057111 6057330 -22947326 - Copia2_I LTR Copia -407 3755 3526 8 631 1442 6 0 0 chrUextra 6057680 6057850 -22946806 - Copia2_LTR_DM LTR Copia 0 198 29 8 631 1034 0 0 0 chrUextra 6057850 6057969 -22946687 - Invader1_LTR LTR Gypsy 0 423 305 8 631 23 68 0 0 chrUextra 6058188 6058232 -22946424 + AT_rich Low_complexity Low_complexity 1 44 0 8 631 1893 50 0 0 chrUextra 6058687 6058926 -22945730 - PROTOP DNA P 0 4480 4242 8 631 3773 30 0 0 chrUextra 6059027 6059495 -22945161 + G2_DM LINE Jockey 2625 3092 -10 8 631 2797 62 10 0 chrUextra 6059496 6059885 -22944771 - G2_DM LINE Jockey -574 2528 2136 8 631 3416 173 19 23 chrUextra 6059985 6060838 -22943818 + SAR_DM Satellite Satellite 333 1181 -291 8 631 2757 6 0 0 chrUextra 6062439 6062759 -22941897 - Copia2_I LTR Copia -2248 1914 1595 8 631 3325 189 16 25 chrUextra 6062859 6063717 -22940939 - SAR_DM Satellite Satellite -467 850 1 8 631 6651 34 3 9 chrUextra 6063817 6064675 -22939981 - BATUMI_I LTR Pao -5384 2579 1727 8 631 1642 114 30 0 chrUextra 6064779 6065043 -22939613 - HETA LINE telomeric -3249 2832 2561 8 631 757 241 10 0 chrUextra 6065040 6065239 -22939417 - HETA LINE telomeric -4691 1390 1190 8 631 1113 173 17 68 chrUextra 6065254 6065608 -22939048 - TAHRE LINE telomeric -10110 353 18 8 631 3823 163 13 13 chrUextra 6065733 6066572 -22938084 - SAR_DM Satellite Satellite -439 1033 195 8 631 654 107 9 0 chrUextra 6066479 6066591 -22938065 + ARS406_DM Unknown Unknown 1 113 -240 8 631 3018 199 21 21 chrUextra 6066691 6067517 -22937139 + SAR_DM Satellite Satellite 439 1264 -208 8 631 903 70 0 0 chrUextra 6067420 6067549 -22937107 - ARS406_DM Unknown Unknown -164 189 61 8 631 6492 11 0 37 chrUextra 6067649 6068507 -22936149 + MDG3_I LTR Gypsy 1367 2192 -2794 8 631 6637 21 1 0 chrUextra 6068607 6069415 -22935241 - R1_DM LINE R1 -2271 3085 2277 8 631 436 0 0 0 chrUextra 6069415 6069465 -22935191 + CIRCE LINE Composite 4931 4980 -1376 8 631 2733 0 0 0 chrUextra 6069565 6069890 -22934766 + FW_DM LINE Jockey 4367 4691 -1 8 631 1205 72 11 27 chrUextra 6069888 6070074 -22934582 - ROO_I LTR Pao -7960 296 114 8 631 2555 32 0 3 chrUextra 6070107 6070423 -22934233 - ROO_LTR LTR Pao 0 428 114 8 631 1167 8 0 0 chrUextra 6071068 6071200 -22933456 + (TAGA)n Simple_repeat Simple_repeat 1 132 0 8 631 1557 17 0 0 chrUextra 6071200 6071380 -22933276 + (TAGG)n Simple_repeat Simple_repeat 1 180 0 8 631 311 340 30 34 chrUextra 6071511 6072049 -22932607 + Invader2_I LTR Gypsy 2495 3029 -1859 8 631 2950 169 14 20 chrUextra 6072441 6073140 -22931516 - SAR_DM Satellite Satellite -587 885 191 8 631 512 199 62 0 chrUextra 6073151 6073297 -22931359 - SAR_DM Satellite Satellite -749 723 569 8 631 2605 93 28 15 chrUextra 6073402 6074253 -22930403 - DMSAT6 Satellite Satellite -82 862 1 8 631 2669 47 0 0 chrUextra 6074872 6075213 -22929443 + DIVER2_I LTR Pao 901 1241 -2906 8 631 3305 173 17 26 chrUextra 6075314 6076152 -22928504 + SAR_DM Satellite Satellite 352 1181 -291 8 631 6948 19 21 0 chrUextra 6076270 6077127 -22927529 + ACCORD2_I LTR Gypsy 81 955 -6257 8 631 21 36 0 0 chrUextra 6077391 6077419 -22927237 + AT_rich Low_complexity Low_complexity 1 28 0 8 631 2116 109 0 0 chrUextra 6077709 6078022 -22926634 - DMRT1B LINE R1 -2 5181 4869 8 631 3315 178 16 17 chrUextra 6078191 6079041 -22925615 - SAR_DM Satellite Satellite -535 848 1 8 631 1071 87 0 0 chrUextra 6079157 6079318 -22925338 - ARS406_DM Unknown Unknown -192 161 1 8 631 3143 180 37 13 chrUextra 6079222 6079998 -22924658 + SAR_DM Satellite Satellite 192 986 -486 8 631 7370 1 1 3 chrUextra 6080098 6080955 -22923701 + SSU-rRNA_Dme rRNA rRNA 485 1339 -656 8 631 1193 44 167 0 chrUextra 6081055 6081271 -22923385 - FW_DM LINE Jockey -867 3825 3574 8 631 5153 23 20 0 chrUextra 6081270 6081912 -22922744 - FW_DM LINE Jockey -1277 3415 2761 8 631 2686 160 18 7 chrUextra 6082022 6082594 -22922062 + SAR_DM Satellite Satellite 326 903 -569 8 631 657 53 53 0 chrUextra 6082509 6082604 -22922052 - ARS406_DM Unknown Unknown -164 189 90 8 631 1036 209 0 4 chrUextra 6082609 6082869 -22921787 + SAR_DM Satellite Satellite 496 754 -718 8 631 39 50 0 0 chrUextra 6083535 6083595 -22921061 + AT_rich Low_complexity Low_complexity 1 60 0 8 631 26 50 0 0 chrUextra 6083766 6083806 -22920850 + AT_rich Low_complexity Low_complexity 1 40 0 8 631 7087 15 15 0 chrUextra 6083926 6084783 -22919873 - DOC2_DM LINE Jockey -2289 2504 1635 8 631 7069 20 13 0 chrUextra 6084883 6085739 -22918917 + R1_DM LINE R1 1733 2599 -2757 8 631 2757 204 30 28 chrUextra 6086816 6087652 -22917004 + SAR_DM Satellite Satellite 373 1210 -262 8 631 6543 37 31 8 chrUextra 6087755 6088602 -22916054 + Baggins1 LINE LOA 2742 3607 -1846 8 631 3376 188 20 20 chrUextra 6088711 6089568 -22915088 - SAR_DM Satellite Satellite -317 1155 299 8 631 3190 56 25 14 chrUextra 6089668 6090517 -22914139 + PROTOP_A DNA P 383 1105 0 8 631 3463 187 8 19 chrUextra 6090625 6091482 -22913174 + SAR_DM Satellite Satellite 253 1100 -372 8 631 2456 0 3 0 chrUextra 6091582 6091864 -22912792 + LSU-rRNA_Dme rRNA rRNA 2404 2686 -1214 8 631 4860 0 2 2 chrUextra 6091861 6092439 -22912217 + R1_DM LINE R1 852 1429 -3927 8 631 7265 6 19 1 chrUextra 6092539 6093396 -22911260 - GTWIN_I LTR Gypsy -1467 4954 4083 8 631 3039 115 0 0 chrUextra 6093496 6093964 -22910692 - DMRT1B LINE R1 -1582 3601 3134 8 631 487 285 67 0 chrUextra 6093995 6094160 -22910496 + Gypsy12_I LTR Gypsy 3154 3329 -2217 8 631 787 39 0 0 chrUextra 6094453 6094557 -22910099 + G5_DM LINE Jockey 4753 4856 0 8 631 836 106 9 20 chrUextra 6094561 6095310 -22909346 - RSP Satellite Satellite -13 741 1 8 631 237 172 86 0 chrUextra 6095410 6095468 -22909188 - TART LINE telomeric -1332 13145 13083 8 631 2142 125 0 25 chrUextra 6095488 6095852 -22908804 - TART LINE telomeric -10448 4029 3682 8 631 2080 108 21 78 chrUextra 6095846 6096267 -22908389 - TART LINE telomeric -11115 3362 2966 8 631 603 75 53 0 chrUextra 6096367 6096461 -22908195 - Invader2_I LTR Gypsy -4492 100 2 8 631 753 74 243 0 chrUextra 6096477 6096691 -22907965 - Invader2_LTR LTR Gypsy 0 266 1 8 631 921 164 318 10 chrUextra 6096691 6096980 -22907676 - HMSBEAGLE_I LTR Gypsy -355 6174 5797 8 631 1498 95 30 0 chrUextra 6096991 6097223 -22907433 - HMSBEAGLE_I LTR Gypsy -901 5628 5390 8 631 7449 7 0 0 chrUextra 6097324 6098181 -22906475 - Gypsy6_I LTR Gypsy -1921 5091 4235 8 631 491 15 77 0 chrUextra 6098281 6098346 -22906310 + ARS406_DM Unknown Unknown 120 189 -164 8 631 3229 187 31 22 chrUextra 6098288 6099138 -22905518 - SAR_DM Satellite Satellite -242 1230 374 8 631 2643 7 0 0 chrUextra 6099238 6099544 -22905112 + DMRT1B LINE R1 4878 5183 0 8 631 2221 104 26 45 chrUextra 6099551 6100090 -22904566 + QUASIMODO_LTR LTR Gypsy 51 643 -15 8 631 1251 92 0 0 chrUextra 6100195 6100368 -22904288 - TART_B1 LINE telomeric -6067 4587 4415 8 631 5242 51 15 0 chrUextra 6100366 6101052 -22903604 - TART_B1 LINE telomeric -7026 3628 2933 8 631 3559 16 0 25 chrUextra 6101152 6101594 -22903062 + CIRCE LINE Composite 1443 1873 -4483 8 631 3010 24 5 13 chrUextra 6101624 6102009 -22902647 + CIRCE LINE Composite 2015 2396 -3960 8 631 1127 70 13 17 chrUextra 6102113 6102343 -22902313 + (AATAG)n Simple_repeat Simple_repeat 1 229 0 8 631 1217 102 9 5 chrUextra 6102371 6102795 -22901861 + (AATAG)n Simple_repeat Simple_repeat 1 426 0 8 631 978 65 6 19 chrUextra 6102808 6102966 -22901690 + (AATAG)n Simple_repeat Simple_repeat 2 157 0 8 631 3240 181 15 16 chrUextra 6103066 6103871 -22900785 - SAR_DM Satellite Satellite -489 983 180 8 631 1064 70 0 6 chrUextra 6103764 6103923 -22900733 + ARS406_DM Unknown Unknown 1 158 -195 8 631 3709 103 103 43 chrUextra 6104048 6104880 -22899776 + PROTOP_A DNA P 1 882 -223 8 631 2638 204 39 21 chrUextra 6104992 6105759 -22898897 + SAR_DM Satellite Satellite 378 1158 -314 8 631 346 86 17 0 chrUextra 6105776 6105834 -22898822 + SAR_DM Satellite Satellite 377 435 -1037 8 631 3605 189 9 12 chrUextra 6105937 6106790 -22897866 - SAR_DM Satellite Satellite -1092 850 1 8 631 3879 2 0 0 chrUextra 6106894 6107340 -22897316 + NOMAD_LTR LTR Gypsy 73 518 0 8 631 6158 45 38 9 chrUextra 6107853 6108707 -22895949 + R1_DM LINE R1 257 1134 -4222 8 631 313 68 0 0 chrUextra 6109764 6109808 -22894848 + ARS406_DM Unknown Unknown 146 189 -164 8 631 2870 197 7 25 chrUextra 6109771 6110497 -22894159 - SAR_DM Satellite Satellite -620 833 27 8 631 782 40 0 0 chrUextra 6110497 6110597 -22894059 + ARS406_DM Unknown Unknown 90 189 -164 8 631 2870 197 7 25 chrUextra 6110597 6110619 -22894037 - SAR_DM Satellite Satellite -620 26 1 8 631 3496 187 13 20 chrUextra 6111676 6112531 -22892125 - SAR_DM Satellite Satellite -532 849 1 8 631 3436 191 18 31 chrUextra 6112631 6113487 -22891169 - SAR_DM Satellite Satellite -518 844 1 8 631 2306 8 0 0 chrUextra 6113587 6113849 -22890807 + LSU-rRNA_Dme rRNA rRNA 2195 2456 -1444 8 631 5345 2 0 0 chrUextra 6113852 6114443 -22890213 + R2_DM LINE R2 603 1193 -2414 8 631 1620 5 0 0 chrUextra 6114543 6114964 -22889692 + (TTATA)n Simple_repeat Simple_repeat 1 421 0 8 631 2332 11 0 0 chrUextra 6114984 6115260 -22889396 + Copia_LTR LTR Copia 1 276 0 8 631 1131 29 0 0 chrUextra 6115260 6115399 -22889257 + Copia_I LTR Copia 1 139 -4454 8 631 2588 106 23 32 chrUextra 6115499 6116355 -22888301 - DMSAT6 Satellite Satellite -84 848 1 8 631 227 229 16 16 chrUextra 6116984 6117046 -22887610 + MAX_I LTR Pao 3570 3631 -4283 8 631 7043 39 1 1 chrUextra 6117411 6118267 -22886389 - R1_DM LINE R1 -3638 1718 863 8 631 279 125 234 0 chrUextra 6118373 6118757 -22885899 + (CTAAA)n Simple_repeat Simple_repeat 1 474 0 8 631 2340 4 4 0 chrUextra 6118762 6119037 -22885619 + Copia_LTR LTR Copia 1 276 0 8 631 239 0 0 0 chrUextra 6119037 6119071 -22885585 + Copia_LTR LTR Copia 243 276 0 8 631 1156 7 178 0 chrUextra 6119071 6119223 -22885433 + Copia_I LTR Copia 1 179 -4414 8 631 1597 86 0 0 chrUextra 6119323 6119533 -22885123 - Gypsy12_I LTR Gypsy -680 4866 4657 8 631 1089 43 107 0 chrUextra 6119531 6119671 -22884985 - PROTOP_B DNA P -998 155 1 8 631 2607 159 58 26 chrUextra 6121243 6122087 -22882569 - TART LINE telomeric -4887 9590 8495 8 631 24 32 0 0 chrUextra 6122809 6122840 -22881816 + AT_rich Low_complexity Low_complexity 1 31 0 8 631 262 279 0 0 chrUextra 6122846 6122914 -22881742 + Invader4_I LTR Gypsy 1235 1302 -1111 8 631 40 21 0 0 chrUextra 6123215 6123262 -22881394 + AT_rich Low_complexity Low_complexity 1 47 0 8 631 4317 76 136 8 chrUextra 6123275 6124003 -22880653 + ACCORD2_I LTR Gypsy 883 1703 -5509 8 631 2383 265 5 0 chrUextra 6124210 6124828 -22879828 + HMSBEAGLE_I LTR Gypsy 3177 3797 -2732 8 631 287 311 8 8 chrUextra 6124826 6124959 -22879697 + HMSBEAGLE_I LTR Gypsy 4010 4142 -2387 8 631 2814 189 32 10 chrUextra 6125059 6125648 -22879008 - TAHRE LINE telomeric -122 10341 9740 8 631 1912 31 50 12 chrUextra 6125656 6125915 -22878741 - HETA LINE telomeric -2379 3702 3434 8 631 2920 95 90 4 chrUextra 6126019 6126499 -22878157 + Gypsy12_I LTR Gypsy 5024 5544 -2 8 631 1562 192 30 38 chrUextra 6126502 6126871 -22877785 + Gypsy12_LTR LTR Gypsy 2 367 -1969 8 631 6213 99 8 1 chrUextra 6126971 6127827 -22876829 - R1_DM LINE R1 -3615 1741 880 8 631 1587 6 0 0 chrUextra 6127931 6128111 -22876545 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 8 631 1757 54 4 28 chrUextra 6128139 6128386 -22876270 + BATUMI_LTR LTR Pao 32 272 0 8 631 3075 43 20 5 chrUextra 6128386 6128782 -22875874 + BATUMI_I LTR Pao 1 402 -7561 8 631 6592 37 0 8 chrUextra 6128882 6129737 -22874919 + IDEFIX_I LTR Gypsy 3189 4036 -1592 8 631 1599 4 0 0 chrUextra 6129837 6130066 -22874590 + (GAGAA)n Simple_repeat Simple_repeat 1 229 0 8 631 3490 195 17 20 chrUextra 6130792 6131647 -22873009 + SAR_DM Satellite Satellite 1 852 -203 8 631 7166 35 3 0 chrUextra 6131747 6132602 -22872054 + DMCR1A LINE CR1 3446 4303 -167 8 631 3826 0 0 0 chrUextra 6132702 6133146 -22871510 - ROO_I LTR Pao -202 8054 7611 8 631 3744 7 0 7 chrUextra 6133128 6133557 -22871099 - ROO_I LTR Pao -1030 7226 6801 8 631 3032 39 52 0 chrUextra 6133657 6134043 -22870613 - PROTOP DNA P -4074 406 1 8 631 2171 32 0 0 chrUextra 6134612 6134864 -22869792 + Baggins1 LINE LOA 5201 5452 -1 8 631 4357 105 3 7 chrUextra 6134861 6135467 -22869189 - NOMAD_I LTR Gypsy -2103 4469 3866 8 631 3618 40 69 2 chrUextra 6135629 6136109 -22868547 - PROTOP DNA P -3968 512 1 8 631 486 158 70 12 chrUextra 6136227 6136368 -22868288 - TART LINE telomeric -3986 10491 10371 8 631 3083 215 73 12 chrUextra 6136522 6137377 -22867279 - TAHRE LINE telomeric -4606 1475 375 8 631 5409 0 0 0 chrUextra 6137477 6138078 -22866578 - FW_DM LINE Jockey -1833 2859 2259 8 631 2331 23 0 0 chrUextra 6138066 6138332 -22866324 - Gypsy4_I LTR Gypsy -2600 3688 3423 8 631 3236 204 24 8 chrUextra 6138434 6139233 -22865423 - SAR_DM Satellite Satellite -411 1061 250 8 631 6466 45 48 2 chrUextra 6139387 6140241 -22864415 - MDG1_I LTR Gypsy -4550 2046 1154 8 631 3676 187 14 10 chrUextra 6141307 6142134 -22862522 - SAR_DM Satellite Satellite -396 1076 246 8 631 330 231 33 0 chrUextra 6142059 6142150 -22862506 + XDMR_DM Unknown Unknown 6 99 -261 8 631 6155 7 0 0 chrUextra 6142415 6143107 -22861549 + Copia2_I LTR Copia 152 843 -3319 8 631 485 83 14 0 chrUextra 6143207 6143279 -22861377 + QUASIMODO_I LTR Gypsy 5103 5175 -885 8 631 1745 34 0 0 chrUextra 6143288 6143525 -22861131 + QUASIMODO_I LTR Gypsy 5491 5727 -333 8 631 2545 106 15 37 chrUextra 6143619 6144062 -22860594 + QUASIMODO_LTR LTR Gypsy 63 633 -25 8 631 616 144 9 0 chrUextra 6144163 6144274 -22860382 + DNAREP1_DM LINE Penelope 64 175 -419 8 631 889 165 51 19 chrUextra 6144314 6144528 -22860128 + DNAREP1_DM LINE Penelope 117 332 -262 8 631 419 157 188 73 chrUextra 6144512 6144704 -22859952 - DNAREP1_DM LINE Penelope -380 214 1 8 631 49 43 0 0 chrUextra 6144795 6144865 -22859791 + AT_rich Low_complexity Low_complexity 1 70 0 8 631 46 0 0 0 chrUextra 6145270 6145316 -22859340 + AT_rich Low_complexity Low_complexity 1 46 0 8 631 4639 43 2 12 chrUextra 6145332 6145972 -22858684 + PROTOP DNA P 199 831 -3649 8 631 2571 247 16 36 chrUextra 6146080 6146927 -22857729 - Gypsy6_I LTR Gypsy -1694 5318 4033 8 631 815 92 0 0 chrUextra 6147027 6147147 -22857509 - ARS406_DM Unknown Unknown -233 120 1 8 631 3343 177 7 10 chrUextra 6147051 6147765 -22856891 + SAR_DM Satellite Satellite 192 903 -569 8 631 758 73 0 0 chrUextra 6147772 6147881 -22856775 - ARS406_DM Unknown Unknown -195 158 50 8 631 7155 21 2 8 chrUextra 6147982 6148837 -22855819 + FW_DM LINE Jockey 1586 2435 -2257 8 631 488 98 63 31 chrUextra 6149491 6149618 -22855038 + CT-rich Low_complexity Low_complexity 4 134 0 8 631 5688 2 3 0 chrUextra 6149892 6150537 -22854119 + DOC LINE Jockey 4079 4725 0 8 631 1662 30 0 10 chrUextra 6150542 6150746 -22853910 + CIRCE LINE Composite 3480 3681 -2675 8 631 1189 0 0 7 chrUextra 6150847 6150985 -22853671 - NOMAD_I LTR Gypsy -6435 137 1 8 631 4715 2 0 0 chrUextra 6150985 6151503 -22853153 - NOMAD_LTR LTR Gypsy 0 518 1 8 631 1537 0 0 32 chrUextra 6151802 6151991 -22852665 + DM1731_I LTR Copia 3794 3976 0 8 631 2838 33 0 0 chrUextra 6151991 6152327 -22852329 + DM1731_LTR LTR Copia 1 336 0 8 631 2782 27 0 0 chrUextra 6152328 6152657 -22851999 - TAHRE LINE telomeric -9597 866 538 8 631 2122 46 0 4 chrUextra 6154306 6154567 -22850089 - PROTOP DNA P 0 4480 4221 8 631 7513 1 0 1 chrUextra 6155622 6156477 -22848179 + ROVER-I_DM LTR Gypsy 3257 4110 -2474 8 631 1946 255 24 38 chrUextra 6156577 6156682 -22847974 + SAR_DM Satellite Satellite 251 902 -570 8 631 2197 123 8 0 chrUextra 6156682 6157040 -22847616 - XDMR Unknown Unknown 0 361 1 8 631 2229 125 3 3 chrUextra 6157040 6157401 -22847255 - XDMR Unknown Unknown 0 361 1 8 631 1946 255 24 38 chrUextra 6157401 6157429 -22847227 + SAR_DM Satellite Satellite 903 1090 -382 8 631 5286 34 0 0 chrUextra 6157531 6158152 -22846504 - MAX_I LTR Pao -5377 2537 1917 8 631 1620 0 0 0 chrUextra 6158155 6158368 -22846288 + (CACAA)n Simple_repeat Simple_repeat 1 213 0 8 631 4983 39 74 12 chrUextra 6158485 6159160 -22845496 - ROO_I LTR Pao -3347 4909 4193 8 631 1497 12 0 0 chrUextra 6159169 6159339 -22845317 + FW_DM LINE Jockey 1750 1919 -2773 8 631 7265 18 0 2 chrUextra 6159439 6160293 -22844363 + LSU-rRNA_Dme rRNA rRNA 364 1215 -2685 8 632 3240 195 38 15 chrUextra 6160393 6161247 -22843409 + SAR_DM Satellite Satellite 1 873 -203 8 632 2747 271 21 2 chrUextra 6161347 6162191 -22842465 - G6_DM LINE Jockey -784 1258 399 8 632 669 97 0 0 chrUextra 6162301 6162404 -22842252 - ARS406_DM Unknown Unknown -238 115 13 8 632 3810 178 16 10 chrUextra 6162323 6163155 -22841501 + SAR_DM Satellite Satellite 195 1031 -441 8 632 1405 37 0 0 chrUextra 6163255 6163442 -22841214 + FW_DM LINE Jockey 4506 4692 0 8 632 1109 52 0 0 chrUextra 6163446 6163580 -22841076 - R1_DM LINE R1 -3966 1390 1257 8 632 3890 73 4 27 chrUextra 6163557 6164108 -22840548 - R1_DM LINE R1 -4656 700 163 8 632 3086 31 23 3 chrUextra 6164209 6164593 -22840063 + PROTOP DNA P 940 1331 -3149 8 632 659 226 6 54 chrUextra 6164864 6165032 -22839624 - HETA LINE telomeric -1770 4311 4152 8 632 238 132 19 19 chrUextra 6165772 6165826 -22838830 + (TAA)n Simple_repeat Simple_repeat 1 54 0 8 632 21 57 0 0 chrUextra 6165896 6165931 -22838725 + AT_rich Low_complexity Low_complexity 1 35 0 8 632 24 0 0 0 chrUextra 6165986 6166010 -22838646 + AT_rich Low_complexity Low_complexity 1 24 0 8 632 1078 0 0 0 chrUextra 6166117 6166241 -22838415 + DM1731_I LTR Copia 3853 3976 0 8 632 2562 36 0 3 chrUextra 6166241 6166550 -22838106 + DM1731_LTR LTR Copia 29 336 0 8 632 6996 21 0 1 chrUextra 6167071 6167925 -22836731 + DMRT1B LINE R1 2599 3451 -1732 8 632 2785 204 28 13 chrUextra 6168026 6168875 -22835781 + SAR_DM Satellite Satellite 1 861 -255 8 632 2572 0 0 3 chrUextra 6168979 6169280 -22835376 + Copia_I LTR Copia 4294 4593 0 8 632 2286 4 0 0 chrUextra 6169280 6169556 -22835100 + Copia_LTR LTR Copia 1 276 0 8 632 1620 7 0 0 chrUextra 6169557 6169833 -22834823 + (TATAA)n Simple_repeat Simple_repeat 1 276 0 8 632 1604 26 0 0 chrUextra 6169933 6170123 -22834533 + PROTOP DNA P 4291 4480 0 8 632 21 57 0 0 chrUextra 6170573 6170608 -22834048 + AT_rich Low_complexity Low_complexity 1 35 0 8 632 2676 184 162 9 chrUextra 6170948 6171740 -22832916 - DM297_I LTR Gypsy -1354 4813 3893 8 632 408 0 134 0 chrUextra 6172582 6172694 -22831962 + (TC)n Simple_repeat Simple_repeat 2 128 0 8 632 373 207 36 29 chrUextra 6172795 6172932 -22831724 - Gypsy12A_LTR LTR Gypsy -1286 1050 826 8 632 1638 204 35 21 chrUextra 6172961 6173535 -22831121 - Gypsy12A_LTR LTR Gypsy -1786 550 1 8 632 240 309 10 0 chrUextra 6173552 6173649 -22831007 + Ulysses_I LTR Gypsy 5202 5299 -1082 8 632 6800 29 22 0 chrUextra 6173749 6174603 -22830053 + R1_DM LINE R1 2146 3018 -2338 8 632 336 24 0 0 chrUextra 6174713 6174754 -22829902 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 632 476 209 8 17 chrUextra 6174754 6174871 -22829785 + HETRP_DM Satellite Satellite 1549 1664 -208 8 632 681 179 7 14 chrUextra 6175039 6175181 -22829475 + HETRP_DM Satellite Satellite 1529 1669 -203 8 632 24 53 0 0 chrUextra 6175188 6175226 -22829430 + AT_rich Low_complexity Low_complexity 1 38 0 8 632 625 200 7 14 chrUextra 6175314 6175456 -22829200 + HETRP_DM Satellite Satellite 1529 1669 -203 8 632 1484 22 0 6 chrUextra 6175660 6175841 -22828815 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 8 632 3302 186 17 19 chrUextra 6176611 6177444 -22827212 + SAR_DM Satellite Satellite 386 1216 -256 8 632 533 43 0 0 chrUextra 6177395 6177465 -22827191 - ARS406_DM Unknown Unknown -164 189 120 8 632 862 87 14 0 chrUextra 6177565 6177703 -22826953 - ARS406_DM Unknown Unknown -213 140 1 8 632 3552 177 7 10 chrUextra 6177607 6178419 -22826237 + SAR_DM Satellite Satellite 192 1001 -471 8 632 2323 0 0 3 chrUextra 6178519 6178809 -22825847 + DOC LINE Jockey 4437 4725 0 8 632 2634 167 6 4 chrUextra 6178826 6179373 -22825283 + SAR_DM Satellite Satellite 326 873 -599 8 632 2499 83 26 23 chrUextra 6179473 6180327 -22824329 - DMSAT6 Satellite Satellite -78 855 1 8 632 6991 1 2 2 chrUextra 6180427 6181281 -22823375 - ROVER-I_DM LTR Gypsy -1334 5250 4397 8 632 302 64 21 0 chrUextra 6182188 6182235 -22822421 - DIVER2_LTR LTR Pao -1 384 337 8 632 750 229 0 0 chrUextra 6182342 6182521 -22822135 + (TA)n Simple_repeat Simple_repeat 1 179 0 8 632 1092 133 0 0 chrUextra 6182501 6182681 -22821975 + (CATA)n Simple_repeat Simple_repeat 1 180 0 8 632 235 213 64 39 chrUextra 6182702 6182780 -22821876 - OSVALDO_LTR LTR Gypsy -1105 91 12 8 632 852 196 0 0 chrUextra 6182810 6182989 -22821667 + (CATA)n Simple_repeat Simple_repeat 2 180 0 8 632 1059 139 0 0 chrUextra 6182999 6183179 -22821477 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 632 3016 29 10 0 chrUextra 6183289 6183704 -22820952 + MDG1_I LTR Gypsy 5863 6281 -315 8 632 719 66 0 24 chrUextra 6183719 6183844 -22820812 + MDG1_I LTR Gypsy 6475 6596 0 8 632 372 88 0 0 chrUextra 6183860 6183917 -22820739 + (TAA)n Simple_repeat Simple_repeat 3 59 0 8 632 1452 85 98 0 chrUextra 6183919 6184143 -22820513 + MDG1_LTR LTR Gypsy 94 339 -103 8 632 609 131 49 20 chrUextra 6184244 6184602 -22820054 + GA-rich Low_complexity Low_complexity 1 368 0 8 632 1174 187 154 25 chrUextra 6185246 6185641 -22819015 - Gypsy12_LTR LTR Gypsy -727 1609 1164 8 632 436 226 31 37 chrUextra 6185658 6185819 -22818837 - Gypsy12_LTR LTR Gypsy -1257 1079 920 8 632 2305 4 29 4 chrUextra 6186151 6186431 -22818225 - STALKER4_LTR LTR Gypsy -115 287 1 8 632 4312 9 2 11 chrUextra 6186431 6187005 -22817651 - STALKER4_I LTR Gypsy 0 6530 5962 8 632 3383 177 13 14 chrUextra 6187106 6187936 -22816720 - SAR_DM Satellite Satellite -452 1020 192 8 632 700 102 0 8 chrUextra 6187839 6187958 -22816698 + ARS406_DM Unknown Unknown 1 118 -235 8 632 1935 21 4 0 chrUextra 6188060 6188297 -22816359 + R1_DM LINE R1 5032 5269 -87 8 632 4792 44 16 0 chrUextra 6188297 6188911 -22815745 + R1_DM LINE R1 1257 1880 -3476 8 632 2414 89 30 15 chrUextra 6189018 6189864 -22814792 + DMSAT6 Satellite Satellite 1 858 -3 8 632 3957 17 36 11 chrUextra 6189964 6190817 -22813839 + MAX_I LTR Pao 582 1537 -6377 8 632 7063 9 2 1 chrUextra 6190917 6191770 -22812886 + Invader2_I LTR Gypsy 874 1727 -2865 8 632 2179 16 0 0 chrUextra 6191870 6192126 -22812530 + R1_DM LINE R1 5101 5356 0 8 632 3902 77 30 3 chrUextra 6192159 6192723 -22811933 + R1_DM LINE R1 1 579 -4777 8 632 1945 9 0 0 chrUextra 6192826 6193050 -22811606 - Gypsy4_I LTR Gypsy -415 5873 5650 8 632 5092 16 5 0 chrUextra 6193055 6193676 -22810980 - Gypsy4_I LTR Gypsy -890 5398 4775 8 632 3484 179 18 18 chrUextra 6193777 6194629 -22810027 - SAR_DM Satellite Satellite -365 1107 256 8 632 3583 172 13 8 chrUextra 6195682 6196508 -22808148 + SAR_DM Satellite Satellite 247 1076 -396 8 632 762 140 14 0 chrUextra 6196635 6196778 -22807878 + HETA LINE telomeric 3043 3187 -2894 8 632 723 170 86 21 chrUextra 6196901 6197142 -22807514 + TART LINE telomeric 9364 9608 -4869 8 632 1814 57 7 50 chrUextra 6197142 6197421 -22807235 + MDG3_LTR LTR Gypsy 1 267 0 8 632 470 14 58 0 chrUextra 6197419 6197488 -22807168 + MDG3_I LTR Gypsy 1 73 -4913 8 632 7153 16 0 2 chrUextra 6197588 6198441 -22806215 - BEL_I LTR Pao -373 5031 4181 8 632 3056 164 19 11 chrUextra 6198545 6199394 -22805262 + SAR_DM Satellite Satellite 1 856 -435 8 632 3446 179 13 21 chrUextra 6199494 6200341 -22804315 - SAR_DM Satellite Satellite -264 1208 369 8 632 6977 25 1 1 chrUextra 6200447 6201300 -22803356 - R1_DM LINE R1 -2790 2566 1714 8 632 5728 89 0 10 chrUextra 6201445 6202253 -22802403 + Gypsy12_I LTR Gypsy 4206 5005 -541 8 632 3315 182 35 15 chrUextra 6202353 6203206 -22801450 + SAR_DM Satellite Satellite 207 1076 -396 8 632 2073 134 74 40 chrUextra 6204261 6204760 -22799896 - TAHRE LINE telomeric -9942 521 6 8 632 2335 75 3 0 chrUextra 6204747 6205081 -22799575 - HETA LINE telomeric -2 6079 5745 8 632 1528 156 7 10 chrUextra 6205212 6205510 -22799146 - HETA LINE telomeric -2258 3823 3527 8 632 4527 0 0 0 chrUextra 6205512 6206030 -22798626 - NOMAD_LTR LTR Gypsy 0 518 1 8 632 237 0 0 0 chrUextra 6206030 6206061 -22798595 - NOMAD_I LTR Gypsy 0 6572 6542 8 632 3450 192 16 19 chrUextra 6206165 6207018 -22797638 + SAR_DM Satellite Satellite 1 850 -216 8 632 2107 106 18 47 chrUextra 6207118 6207971 -22796685 + DMSAT6 Satellite Satellite 1 827 -74 8 632 3839 16 93 4 chrUextra 6208073 6208579 -22796077 + PROTOP DNA P 3930 4480 0 8 632 1635 112 199 0 chrUextra 6208579 6208923 -22795733 - TART_B1 LINE telomeric -9022 1632 1220 8 632 1620 20 0 2 chrUextra 6209406 6209875 -22794781 + (TCTA)n Simple_repeat Simple_repeat 1 468 0 8 632 7129 1 2 0 chrUextra 6209975 6210827 -22793829 + Gypsy5_I LTR Gypsy 5430 6283 -226 8 632 3365 76 7 11 chrUextra 6210927 6211422 -22793234 + BATUMI_I LTR Pao 5994 6420 -1543 8 632 2723 57 8 18 chrUextra 6211382 6211777 -22792879 - BATUMI_I LTR Pao -962 7001 6611 8 632 4772 5 0 0 chrUextra 6211879 6212433 -22792223 - Gypsy4_I LTR Gypsy -419 5869 5316 8 632 2103 0 0 12 chrUextra 6212476 6212731 -22791925 - Gypsy4_I LTR Gypsy -961 5327 5076 8 632 278 230 0 0 chrUextra 6212832 6212906 -22791750 + SAR_DM Satellite Satellite 988 1061 -411 8 632 2935 175 28 14 chrUextra 6212950 6213673 -22790983 + SAR_DM Satellite Satellite 205 937 -535 8 632 47 0 0 0 chrUextra 6214322 6214369 -22790287 + AT_rich Low_complexity Low_complexity 1 47 0 8 632 364 40 0 20 chrUextra 6214735 6214786 -22789870 + T412LTR LTR LTR 112 161 -320 8 632 2961 17 3 6 chrUextra 6214784 6215147 -22789509 + DM412B_LTR LTR Gypsy 128 489 -82 8 632 1612 188 94 9 chrUextra 6215134 6215558 -22789098 - TART LINE telomeric -5068 9409 8950 8 632 21 0 0 0 chrUextra 6215728 6215749 -22788907 + AT_rich Low_complexity Low_complexity 1 21 0 8 632 37 23 0 0 chrUextra 6215840 6215884 -22788772 + AT_rich Low_complexity Low_complexity 1 44 0 8 632 21 0 0 0 chrUextra 6215905 6215926 -22788730 + AT_rich Low_complexity Low_complexity 1 21 0 8 632 645 214 6 54 chrUextra 6216326 6216494 -22788162 - HETA LINE telomeric -1770 4311 4152 8 632 2518 75 3 0 chrUextra 6216641 6216990 -22787666 + PROTOP DNA P 4131 4480 0 8 632 26 30 0 0 chrUextra 6217340 6217373 -22787283 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 3522 189 13 6 chrUextra 6217593 6218430 -22786226 + SAR_DM Satellite Satellite 234 1076 -396 8 632 3981 211 6 5 chrUextra 6218556 6219395 -22785261 + Gypsy_I LTR Gypsy 452 1291 -5216 8 632 975 82 0 0 chrUextra 6219495 6219642 -22785014 - ARS406_DM Unknown Unknown -206 147 1 8 632 3280 179 15 20 chrUextra 6219536 6220347 -22784309 + SAR_DM Satellite Satellite 180 986 -486 8 632 4029 63 36 23 chrUextra 6220447 6221065 -22783591 - MAX_I LTR Pao -6070 1844 1219 8 632 574 91 325 19 chrUextra 6221051 6221208 -22783448 - MAX_I LTR Pao -6560 1354 1150 8 632 2069 16 0 4 chrUextra 6221399 6221650 -22783006 + CIRCE LINE Composite 721 970 -5386 8 632 2169 57 9 84 chrUextra 6221792 6222138 -22782518 + CIRCE LINE Composite 973 1292 -5064 8 632 240 367 27 45 chrUextra 6221917 6222248 -22782408 + Gypsy12_I LTR Gypsy 2932 3256 -2290 8 632 21 89 0 0 chrUextra 6222960 6223016 -22781640 + AT_rich Low_complexity Low_complexity 1 56 0 8 632 23 68 0 0 chrUextra 6223054 6223098 -22781558 + AT_rich Low_complexity Low_complexity 1 44 0 8 632 26 30 0 0 chrUextra 6223144 6223177 -22781479 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 6910 12 0 7 chrUextra 6223303 6224155 -22780501 - ROO_I LTR Pao -4481 3775 2930 8 632 3413 180 17 19 chrUextra 6224261 6225106 -22779550 + SAR_DM Satellite Satellite 369 1211 -261 8 632 21 89 0 0 chrUextra 6225440 6225496 -22779160 + AT_rich Low_complexity Low_complexity 1 56 0 8 632 23 68 0 0 chrUextra 6225534 6225578 -22779078 + AT_rich Low_complexity Low_complexity 1 44 0 8 632 26 30 0 0 chrUextra 6225624 6225657 -22778999 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 345 23 0 0 chrUextra 6226016 6226059 -22778597 - PROTOP_B DNA P 0 1153 1111 8 632 7240 16 0 0 chrUextra 6226159 6227011 -22777645 + Gypsy2_I LTR Gypsy 828 1679 -4456 8 632 2979 201 33 12 chrUextra 6227112 6227957 -22776699 - SAR_DM Satellite Satellite -261 1211 349 8 632 968 130 0 0 chrUextra 6228063 6228225 -22776431 - IDEFIX_I LTR Gypsy -1062 4566 4405 8 632 1592 105 23 0 chrUextra 6228210 6228476 -22776180 - IDEFIX_I LTR Gypsy -2387 3241 2970 8 632 2135 88 145 0 chrUextra 6228473 6228915 -22775741 - IDEFIX_I LTR Gypsy -4091 1537 1032 8 632 4770 48 63 13 chrUextra 6229015 6229726 -22774930 - QUASIMODO_I LTR Gypsy -1065 4995 4249 8 632 69 13 0 0 chrUextra 6230358 6230434 -22774222 + AT_rich Low_complexity Low_complexity 1 76 0 8 632 21 0 0 0 chrUextra 6230787 6230808 -22773848 + AT_rich Low_complexity Low_complexity 1 21 0 8 632 840 84 8 0 chrUextra 6230919 6231050 -22773606 - ARS406_DM Unknown Unknown -221 132 1 8 632 3465 185 14 9 chrUextra 6230957 6231771 -22772885 + SAR_DM Satellite Satellite 195 1012 -460 8 632 3023 185 50 16 chrUextra 6231871 6232723 -22771933 - SAR_DM Satellite Satellite -515 881 1 8 632 6292 39 18 26 chrUextra 6232823 6233675 -22770981 + R1_DM LINE R1 3568 4412 -944 8 632 6641 30 40 0 chrUextra 6233775 6234627 -22770029 - NINJA_I LTR Pao -1798 4213 3328 8 632 3222 36 111 0 chrUextra 6235035 6235485 -22769171 + PROTOP DNA P 1 500 -3980 8 632 732 43 0 0 chrUextra 6235484 6235578 -22769078 + PROTOP DNA P 111 204 -4276 8 632 3129 183 24 19 chrUextra 6235681 6236531 -22768125 + SAR_DM Satellite Satellite 1 854 -208 8 632 6471 32 58 1 chrUextra 6236631 6237483 -22767173 + ROO_I LTR Pao 2186 3085 -5171 8 632 2905 113 83 63 chrUextra 6237583 6238170 -22766486 - R1_DM LINE R1 -4757 599 1 8 632 645 31 219 0 chrUextra 6238188 6238284 -22766372 + Gypsy6A_LTR LTR Gypsy 71 187 -233 8 632 550 29 0 0 chrUextra 6238365 6238435 -22766221 - R1_DM LINE R1 -3119 2237 2168 8 632 1258 42 18 0 chrUextra 6238535 6238703 -22765953 - Baggins1 LINE LOA -492 4961 4791 8 632 752 37 0 115 chrUextra 6239143 6239265 -22765391 - Baggins1 LINE LOA 0 5453 5346 8 632 3092 8 0 3 chrUextra 6239487 6239869 -22764787 + POGO DNA Pogo 1741 2121 0 8 632 1578 19 0 0 chrUextra 6239869 6240339 -22764317 + (TTATA)n Simple_repeat Simple_repeat 1 470 0 8 632 6688 8 25 0 chrUextra 6240439 6241235 -22763421 + DMRT1A LINE R1 1292 2107 -3076 8 632 451 0 18 0 chrUextra 6241235 6241290 -22763366 - PROTOP_B DNA P 0 1153 1098 8 632 781 298 33 33 chrUextra 6241474 6241621 -22763035 - Gypsy4_I LTR Gypsy -3176 2991 2810 8 632 1504 28 19 0 chrUextra 6241621 6241835 -22762821 - TLD2 Unknown Unknown 0 218 1 8 632 781 298 33 33 chrUextra 6241835 6242233 -22762423 - Gypsy4_I LTR Gypsy -3176 2809 2313 8 632 1179 0 0 0 chrUextra 6242341 6242472 -22762184 + (TTGTG)n Simple_repeat Simple_repeat 1 131 0 8 632 1229 13 33 0 chrUextra 6242472 6242624 -22762032 + DMRT1B LINE R1 3536 3692 -1491 8 632 3492 0 0 5 chrUextra 6242624 6243025 -22761631 + BLOOD_LTR LTR Gypsy 1 399 0 8 632 1390 0 0 6 chrUextra 6243025 6243191 -22761465 + BLOOD_I LTR Gypsy 1 165 -6448 8 632 5911 56 2 4 chrUextra 6243335 6244143 -22760513 + BATUMI_I LTR Pao 4315 5269 -2645 8 632 4779 104 12 29 chrUextra 6244245 6245094 -22759562 - Gypsy12_I LTR Gypsy -4193 1353 463 8 632 5651 12 1 3 chrUextra 6245194 6245874 -22758782 - DMRT1B LINE R1 -4504 679 1 8 632 2187 166 39 17 chrUextra 6246145 6246665 -22757991 - SAR_DM Satellite Satellite -446 1026 496 8 632 1627 153 3 6 chrUextra 6246680 6246996 -22757660 - SAR_DM Satellite Satellite -569 903 589 8 632 6369 1 116 12 chrUextra 6247096 6247947 -22756709 - ROO_I LTR Pao -7123 1133 194 8 632 4954 12 0 0 chrUextra 6248047 6248639 -22756017 + PROTOP DNA P 3889 4480 0 8 632 2135 27 0 0 chrUextra 6248639 6248897 -22755759 - R1_DM LINE R1 -2810 2546 2289 8 632 1707 23 0 0 chrUextra 6249949 6250169 -22754487 + ROO_I LTR Pao 8037 8256 0 8 632 1369 18 0 0 chrUextra 6250169 6250334 -22754322 + ROO_LTR LTR Pao 1 165 -263 8 632 3615 32 13 0 chrUextra 6250334 6250800 -22753856 - PROTOP_A DNA P 0 1105 634 8 632 6361 33 53 15 chrUextra 6250900 6251751 -22752905 - CIRCE LINE Composite -3031 3325 2443 8 632 2428 172 97 17 chrUextra 6252033 6252699 -22751957 + TART LINE telomeric 8952 9604 -4873 8 632 3170 5 0 0 chrUextra 6252802 6253169 -22751487 + R2_DM LINE R2 3241 3607 0 8 632 433 55 0 0 chrUextra 6253168 6253223 -22751433 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 8 632 2994 61 63 5 chrUextra 6253223 6253653 -22751003 + R1_DM LINE R1 1 455 -4901 8 632 6346 39 73 0 chrUextra 6253753 6254604 -22750052 + DMRT1B LINE R1 2662 3574 -1609 8 632 7127 6 0 14 chrUextra 6254706 6255555 -22749101 - Invader3_I LTR Gypsy -2836 2052 1216 8 632 2919 12 9 0 chrUextra 6255657 6256003 -22748653 - MAX_I LTR Pao -7565 349 1 8 632 2740 9 0 0 chrUextra 6256003 6256324 -22748332 - MAX_LTR LTR Pao 0 321 1 8 632 343 57 111 28 chrUextra 6256324 6256396 -22748260 - MAX_I LTR Pao -6898 1016 939 8 632 298 0 0 0 chrUextra 6256436 6256472 -22748184 - MAX_I LTR Pao -6959 955 920 8 632 6919 8 25 0 chrUextra 6256607 6257457 -22747199 + PROTOP_A DNA P 235 1105 0 8 632 1829 124 10 14 chrUextra 6257557 6257851 -22746805 + Gypsy12_I LTR Gypsy 1529 1821 -3725 8 632 3743 91 46 14 chrUextra 6257848 6258408 -22746248 + Gypsy12_I LTR Gypsy 4465 5042 -504 8 632 4657 39 48 1 chrUextra 6258508 6259359 -22745297 + DIVER_I LTR Pao 3151 4041 -1602 8 632 619 166 98 61 chrUextra 6260410 6260702 -22743954 - HETA LINE telomeric -5500 581 4 8 632 588 0 0 0 chrUextra 6260737 6260806 -22743850 - TAHRE LINE telomeric -9 10454 10386 8 632 258 125 0 0 chrUextra 6260795 6260835 -22743821 - TART LINE telomeric -6141 8336 8297 8 632 3645 0 0 0 chrUextra 6260835 6261261 -22743395 - TAHRE LINE telomeric -14 10449 10024 8 632 3517 185 21 23 chrUextra 6261361 6262212 -22742444 - SAR_DM Satellite Satellite -467 849 1 8 632 4432 104 29 9 chrUextra 6262312 6262685 -22741971 - R1_DM LINE R1 -4068 1288 897 8 632 243 88 0 0 chrUextra 6262685 6262719 -22741937 + (CGG)n Simple_repeat Simple_repeat 1 34 0 8 632 4432 104 29 9 chrUextra 6262719 6263046 -22741610 - R1_DM LINE R1 -4460 896 574 8 632 635 96 0 0 chrUextra 6263047 6263141 -22741515 - R1_DM LINE R1 -5184 172 79 8 632 2389 64 67 3 chrUextra 6263263 6263622 -22741034 - PROTOP_A DNA P -723 382 1 8 632 779 190 265 48 chrUextra 6263793 6264102 -22740554 - TART LINE telomeric -3986 10491 10116 8 632 3253 187 16 20 chrUextra 6264214 6265060 -22739596 + SAR_DM Satellite Satellite 388 1230 -242 8 632 7203 2 12 0 chrUextra 6265165 6266016 -22738640 + DM176_I LTR Gypsy 3311 4171 -2249 8 632 340 37 37 0 chrUextra 6266116 6266170 -22738486 + (TAAAG)n Simple_repeat Simple_repeat 3 58 0 8 632 2080 4 0 0 chrUextra 6266170 6266423 -22738233 + TART LINE telomeric 7786 8038 -6439 8 632 2608 183 4 9 chrUextra 6266422 6266967 -22737689 + HETA LINE telomeric 3044 3585 -2496 8 632 3360 183 38 9 chrUextra 6267067 6267913 -22736743 + SAR_DM Satellite Satellite 207 1076 -396 8 632 1527 309 22 22 chrUextra 6268109 6268843 -22735813 + Copia2_I LTR Copia 1358 2091 -2071 8 632 1050 187 35 23 chrUextra 6268969 6269226 -22735430 - Gypsy12_LTR LTR Gypsy -1005 1331 1072 8 632 1416 227 113 33 chrUextra 6269229 6269811 -22734845 - Gypsy12_LTR LTR Gypsy -549 1787 1159 8 632 240 86 0 0 chrUextra 6269939 6269974 -22734682 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 8 632 231 88 0 0 chrUextra 6269988 6270022 -22734634 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 632 243 0 0 0 chrUextra 6270180 6270207 -22734449 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 632 2373 0 0 0 chrUextra 6270872 6271143 -22733513 + LSU-rRNA_Dme rRNA rRNA 2907 3177 -723 8 632 4934 3 0 0 chrUextra 6271144 6271722 -22732934 + R2_DM LINE R2 436 1013 -2594 8 632 22 88 0 0 chrUextra 6271839 6271896 -22732760 + AT_rich Low_complexity Low_complexity 1 57 0 8 632 23 78 0 0 chrUextra 6271934 6271985 -22732671 + AT_rich Low_complexity Low_complexity 1 51 0 8 632 26 30 0 0 chrUextra 6272031 6272064 -22732592 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 492 34 0 0 chrUextra 6272226 6272285 -22732371 - PROTOP_B DNA P -640 513 455 8 632 1228 33 0 0 chrUextra 6272284 6272436 -22732220 - PROTOP_B DNA P -1001 152 1 8 632 287 123 83 30 chrUextra 6272576 6272673 -22731983 - TART LINE telomeric -3988 10489 10421 8 632 5456 40 11 30 chrUextra 6272773 6273624 -22731032 + TART LINE telomeric 3311 4436 -10041 8 632 2277 189 11 5 chrUextra 6273724 6274575 -22730081 - SAR_DM Satellite Satellite -667 856 1 8 632 2887 0 0 3 chrUextra 6274675 6275020 -22729636 + LINEJ1_DM LINE Jockey 4677 5020 0 8 632 6684 31 7 3 chrUextra 6275626 6276474 -22728182 + STALKER4_I LTR Gypsy 4068 4918 -1612 8 632 2232 100 55 59 chrUextra 6276593 6277428 -22727228 - DMSAT6 Satellite Satellite 0 831 1 8 632 602 39 0 0 chrUextra 6277528 6277605 -22727051 - DIVER2_I LTR Pao -2848 1299 1223 8 632 3506 17 0 2 chrUextra 6278479 6278881 -22725775 + R1_DM LINE R1 4956 5356 0 8 632 3098 75 7 7 chrUextra 6278902 6279330 -22725326 + R1_DM LINE R1 23 450 -4906 8 632 2808 262 28 19 chrUextra 6279430 6280281 -22724375 - G6_DM LINE Jockey -522 1520 662 8 632 6945 25 27 7 chrUextra 6280381 6281231 -22723425 + ROO_I LTR Pao 2223 3089 -5167 8 632 1057 43 26 153 chrUextra 6281332 6281522 -22723134 - Baggins1 LINE LOA -5145 308 143 8 632 679 38 123 143 chrUextra 6281934 6282088 -22722568 + PROTOP_B DNA P 328 478 -675 8 632 359 139 97 0 chrUextra 6282072 6282144 -22722512 + HOBO DNA hAT 330 408 -2608 8 632 306 42 83 0 chrUextra 6282134 6282182 -22722474 + HOBO DNA hAT 2337 2388 -628 8 632 1017 186 102 0 chrUextra 6282407 6282633 -22722023 + FW_DM LINE Jockey 1437 1685 -3007 8 632 590 67 0 0 chrUextra 6282648 6282723 -22721933 + FW_DM LINE Jockey 1898 1972 -2720 8 632 1345 145 25 8 chrUextra 6282721 6282958 -22721698 + FW_DM LINE Jockey 2403 2643 -2049 8 632 681 174 154 6 chrUextra 6282970 6283132 -22721524 + FW_DM LINE Jockey 2694 2879 -1813 8 632 192 40 0 0 chrUextra 6283277 6283302 -22721354 + (TAA)n Simple_repeat Simple_repeat 1 25 0 8 632 3715 177 33 15 chrUextra 6284184 6285031 -22719625 - SAR_DM Satellite Satellite -416 1056 195 8 632 2510 108 37 21 chrUextra 6285132 6285629 -22719027 - R1_DM LINE R1 -4331 1025 224 8 632 1618 59 0 5 chrUextra 6285612 6285818 -22718838 - R1_DM LINE R1 -118 5238 5034 8 632 1505 23 0 0 chrUextra 6285808 6285982 -22718674 - R1_DM LINE R1 -665 4691 4518 8 632 596 182 0 0 chrUextra 6286082 6286203 -22718453 - STALKER4_I LTR Gypsy -6175 355 235 8 632 31 58 0 0 chrUextra 6286204 6286256 -22718400 + AT_rich Low_complexity Low_complexity 1 52 0 8 632 3173 32 5 0 chrUextra 6286394 6286771 -22717885 - STALKER4_LTR LTR Gypsy -23 379 1 8 632 1371 31 0 0 chrUextra 6286771 6286932 -22717724 - DIVER_I LTR Pao -2347 3296 3136 8 632 1121 139 69 5 chrUextra 6287064 6287266 -22717390 - DNAREP1_DM LINE Penelope -358 236 22 8 632 5064 25 20 3 chrUextra 6287982 6288626 -22716030 - Invader2_I LTR Gypsy -3936 656 2 8 632 1467 78 10 5 chrUextra 6288627 6288832 -22715824 - Invader2_LTR LTR Gypsy 0 266 61 8 632 7292 25 0 0 chrUextra 6288933 6289782 -22714874 - FW_DM LINE Jockey -1062 3630 2782 8 632 3185 198 18 26 chrUextra 6289882 6290729 -22713927 + SAR_DM Satellite Satellite 430 1269 -203 8 632 4183 19 6 0 chrUextra 6290832 6291345 -22713311 - PROTOP DNA P -163 4317 3802 8 9 2309 41 56 0 chrUextra 6291340 6291682 -22712974 - PROTOP DNA P -3657 823 463 8 633 7325 21 0 1 chrUextra 6291782 6292632 -22712024 - DMRT1B LINE R1 -2197 2986 2138 8 633 23 0 0 0 chrUextra 6293003 6293026 -22711630 + AT_rich Low_complexity Low_complexity 1 23 0 8 633 1086 7 0 13 chrUextra 6293682 6293836 -22710820 + DOC LINE Jockey 4574 4725 0 8 633 5373 34 12 7 chrUextra 6293841 6294532 -22710124 + Gypsy12_LTR LTR Gypsy 1140 1833 -503 8 633 4014 169 10 10 chrUextra 6294648 6295479 -22709177 - SAR_DM Satellite Satellite -396 1076 246 8 633 1159 0 0 0 chrUextra 6295582 6295708 -22708948 - ROVER-I_DM LTR Gypsy -6458 126 1 8 633 3188 3 0 24 chrUextra 6295708 6296084 -22708572 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 633 3170 0 0 0 chrUextra 6296084 6296432 -22708224 - DOC LINE Jockey -974 3751 3404 8 633 2880 176 43 15 chrUextra 6296545 6297381 -22707275 - SAR_DM Satellite Satellite -535 859 1 8 633 3845 37 21 33 chrUextra 6297482 6298330 -22706326 - DM176_I LTR Gypsy -5611 809 29 8 633 600 62 411 0 chrUextra 6298515 6298644 -22706012 + MAX_I LTR Pao 1173 1354 -6560 8 633 4566 61 32 21 chrUextra 6298628 6299282 -22705374 + MAX_I LTR Pao 1217 1877 -6037 8 633 1518 6 0 0 chrUextra 6299382 6299554 -22705102 - MDG1_I LTR Gypsy -6424 172 1 8 633 3730 20 0 0 chrUextra 6299554 6299996 -22704660 - MDG1_LTR LTR Gypsy 0 442 1 8 633 1976 32 0 12 chrUextra 6299996 6300232 -22704424 + MDG1_I LTR Gypsy 5762 5994 -602 8 633 2988 192 23 21 chrUextra 6300338 6301179 -22703477 + SAR_DM Satellite Satellite 1 842 -339 8 633 1383 0 7 0 chrUextra 6301282 6301436 -22703220 + LSU-rRNA_Dme rRNA rRNA 3746 3900 0 8 633 22 56 0 0 chrUextra 6301508 6301544 -22703112 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 262 150 0 0 chrUextra 6301549 6301589 -22703067 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 633 262 150 0 0 chrUextra 6301644 6301684 -22702972 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 633 269 125 0 0 chrUextra 6301727 6301767 -22702889 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 633 22 56 0 0 chrUextra 6301780 6301816 -22702840 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 907 9 0 27 chrUextra 6301842 6301954 -22702702 + NTS_DM Other Other 25 133 -107 8 633 1304 18 0 6 chrUextra 6301954 6302119 -22702537 + NTS_DM Other Other 38 201 -39 8 633 3735 190 12 9 chrUextra 6302233 6303074 -22701582 + SAR_DM Satellite Satellite 212 1054 -418 8 633 3604 183 31 11 chrUextra 6303182 6304031 -22700625 - SAR_DM Satellite Satellite -373 1099 234 8 633 1414 20 25 20 chrUextra 6304132 6304331 -22700325 + NTS_DM Other Other 41 240 0 8 633 1904 8 17 13 chrUextra 6304331 6304570 -22700086 + NTS_DM Other Other 1 240 0 8 633 1908 8 17 13 chrUextra 6304570 6304809 -22699847 + NTS_DM Other Other 1 240 0 8 633 1355 6 0 18 chrUextra 6304809 6304974 -22699682 + NTS_DM Other Other 1 162 -78 8 633 7794 0 5 0 chrUextra 6305082 6305932 -22698724 - Gypsy6_I LTR Gypsy -1496 5516 4663 8 633 7002 15 6 0 chrUextra 6306032 6306882 -22697774 - IDEFIX_I LTR Gypsy -1080 4548 3694 8 633 2547 156 110 10 chrUextra 6306982 6307603 -22697053 - TART LINE telomeric -4908 9569 8950 8 633 29 28 0 0 chrUextra 6307749 6307785 -22696871 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 233 332 67 62 chrUextra 6308312 6308713 -22695943 + Copia2_I LTR Copia 1497 1899 -2263 8 633 1558 289 35 32 chrUextra 6308882 6309690 -22694966 - SAR_DM Satellite Satellite -456 1016 207 8 633 325 315 44 11 chrUextra 6309540 6309723 -22694933 + XDMR Unknown Unknown 1 189 -172 8 633 822 31 0 0 chrUextra 6309859 6309957 -22694699 + ARS406_DM Unknown Unknown 92 189 -164 8 633 2053 160 10 9 chrUextra 6309869 6310680 -22693976 - SAR_DM Satellite Satellite -571 811 1 8 633 3305 41 0 0 chrUextra 6310780 6311191 -22693465 + FW_DM LINE Jockey 4282 4692 0 8 633 3544 41 2 2 chrUextra 6311193 6311629 -22693027 - R1_DM LINE R1 -3966 1390 955 8 633 24 0 0 0 chrUextra 6311814 6311838 -22692818 + AT_rich Low_complexity Low_complexity 1 24 0 8 633 2153 4 0 0 chrUextra 6311950 6312195 -22692461 - FW_DM LINE Jockey -6 4686 4442 8 633 22 56 0 0 chrUextra 6312248 6312284 -22692372 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 981 127 0 0 chrUextra 6312679 6312836 -22691820 + (TA)n Simple_repeat Simple_repeat 1 157 0 8 633 230 180 62 47 chrUextra 6312836 6312900 -22691756 - Stalker2_LTR LTR Gypsy -134 290 226 8 633 1137 146 0 3 chrUextra 6312900 6313526 -22691130 + (TA)n Simple_repeat Simple_repeat 1 624 0 8 633 5151 76 52 22 chrUextra 6313628 6314476 -22690180 + STALKER4_I LTR Gypsy 634 1506 -5024 8 633 3185 98 7 11 chrUextra 6314576 6315028 -22689628 + Gypsy12_I LTR Gypsy 2005 2454 -3092 8 633 2361 128 38 18 chrUextra 6315027 6315425 -22689231 + Gypsy12_I LTR Gypsy 2299 2704 -2842 8 633 4586 16 118 1 chrUextra 6315525 6316374 -22688282 - R1_DM LINE R1 -2401 2955 2008 8 633 2394 0 4 0 chrUextra 6316474 6316747 -22687909 - Copia_I LTR Copia -4319 274 1 8 633 2323 14 0 0 chrUextra 6316747 6317023 -22687633 - Copia_LTR LTR Copia 0 276 1 8 633 682 335 10 0 chrUextra 6317023 6317323 -22687333 + HMSBEAGLE_I LTR Gypsy 3819 4121 -2408 8 633 972 0 27 0 chrUextra 6317423 6317535 -22687121 + DMRT1B LINE R1 5069 5183 0 8 633 1658 26 0 0 chrUextra 6317540 6317730 -22686926 - R1_DM LINE R1 -760 4596 4407 8 633 2532 11 126 2 chrUextra 6317750 6318272 -22686384 - R1_DM LINE R1 -1074 4282 3696 8 633 1986 9 5 0 chrUextra 6318372 6318595 -22686061 - MAX_I LTR Pao -7690 224 1 8 633 2896 6 0 0 chrUextra 6318595 6318916 -22685740 - MAX_LTR LTR Pao 0 321 1 8 633 2426 10 0 0 chrUextra 6318917 6319221 -22685435 - Invader2_I LTR Gypsy -204 4388 4085 8 633 1828 9 78 4 chrUextra 6319323 6319554 -22685102 + MICROPIA_I LTR Gypsy 4229 4476 0 8 633 4041 13 0 61 chrUextra 6319554 6320061 -22684595 + MICROPIA_LTR LTR Gypsy 1 476 0 8 633 287 265 0 47 chrUextra 6320063 6320170 -22684486 + Gypsy12_LTR LTR Gypsy 1119 1220 -1116 8 633 6815 32 7 6 chrUextra 6320270 6321119 -22683537 - IDEFIX_I LTR Gypsy -2256 3372 2523 8 633 3367 0 0 0 chrUextra 6321219 6321589 -22683067 + LSU-rRNA_Dme rRNA rRNA 2214 2583 -1317 8 633 1930 4 17 13 chrUextra 6321629 6321868 -22682788 + NTS_DM Other Other 1 240 0 8 633 555 16 0 0 chrUextra 6321868 6321930 -22682726 + NTS_DM Other Other 1 62 -178 8 633 1296 0 0 0 chrUextra 6321926 6322068 -22682588 + R2_DM LINE R2 2081 2222 -1385 8 633 3063 14 3 0 chrUextra 6322168 6322516 -22682140 + Invader1_LTR LTR Gypsy 75 423 0 8 633 1058 23 15 8 chrUextra 6322516 6322644 -22682012 + CIRCE LINE Composite 4367 4495 -1861 8 633 2174 95 11 8 chrUextra 6322644 6323017 -22681639 + S_DM DNA Tc1 1 374 -1362 8 633 2126 0 8 0 chrUextra 6323117 6323358 -22681298 - R1_DM LINE R1 -5113 243 1 8 633 5434 2 0 0 chrUextra 6323371 6323966 -22680690 - LSU-rRNA_Dme rRNA rRNA -1257 2643 2049 8 633 5344 6 0 0 chrUextra 6324066 6324691 -22679965 + Invader2_I LTR Gypsy 3749 4373 -219 8 633 1353 7 0 0 chrUextra 6324692 6324843 -22679813 + Invader2_LTR LTR Gypsy 116 266 0 8 633 5827 75 78 7 chrUextra 6325016 6325862 -22678794 - DMCR1A LINE CR1 -319 4151 3246 8 633 1701 55 5 0 chrUextra 6325964 6326184 -22678472 - Baggins1 LINE LOA -442 5011 4791 8 633 1330 29 0 76 chrUextra 6326629 6326813 -22677843 - Baggins1 LINE LOA 0 5453 5284 8 633 473 210 24 24 chrUextra 6327060 6327187 -22677469 - HETRP_DM Satellite Satellite -197 1675 1549 8 633 192 40 0 0 chrUextra 6327187 6327212 -22677444 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 633 687 193 14 14 chrUextra 6327338 6327485 -22677171 - HETRP_DM Satellite Satellite -197 1675 1529 8 633 520 188 25 17 chrUextra 6327643 6327762 -22676894 - HETRP_DM Satellite Satellite -197 1675 1556 8 633 5254 20 0 0 chrUextra 6327862 6328461 -22676195 - FW_DM LINE Jockey -3694 998 400 8 633 2216 12 0 0 chrUextra 6328461 6328711 -22675945 + STALKER4_LTR LTR Gypsy 1 250 -152 8 633 3311 189 51 22 chrUextra 6328812 6329660 -22674996 + SAR_DM Satellite Satellite 340 1211 -261 8 633 2600 167 11 8 chrUextra 6329760 6330285 -22674371 - SAR_DM Satellite Satellite -620 852 326 8 633 1572 102 0 59 chrUextra 6330712 6330984 -22673672 - Gypsy12_I LTR Gypsy -4666 880 625 8 633 2147 72 18 39 chrUextra 6330977 6331309 -22673347 - Gypsy12_I LTR Gypsy -5221 325 1 8 633 1319 159 49 4 chrUextra 6331309 6331555 -22673101 - Gypsy12A_LTR LTR Gypsy 0 2280 2024 8 633 26 82 0 0 chrUextra 6331969 6332030 -22672626 + AT_rich Low_complexity Low_complexity 1 61 0 8 633 286 278 51 10 chrUextra 6332182 6332280 -22672376 - DMCR1A LINE CR1 -616 3854 3753 8 633 372 280 17 0 chrUextra 6332294 6332412 -22672244 - DMCR1A LINE CR1 -776 3694 3575 8 633 3558 7 11 32 chrUextra 6332607 6333044 -22671612 + DM176_LTR LTR Gypsy 80 507 0 8 633 674 268 0 5 chrUextra 6333127 6333333 -22671323 - Copia2_I LTR Copia -97 4065 3861 8 633 946 9 9 0 chrUextra 6333337 6333452 -22671204 - DM176_I LTR Gypsy -1841 4579 4464 8 633 5041 7 59 0 chrUextra 6333556 6334405 -22670251 + ROO_I LTR Pao 4743 5641 -2615 8 633 3427 168 62 60 chrUextra 6334510 6335354 -22669302 - IDEFIX_I LTR Gypsy -4497 1131 287 8 633 5492 0 0 2 chrUextra 6335454 6336085 -22668571 - DOC LINE Jockey -4085 640 11 8 633 1780 14 0 0 chrUextra 6336085 6336303 -22668353 - FW_DM LINE Jockey -1614 3078 2861 8 633 2289 103 18 30 chrUextra 6336412 6337252 -22667404 - DMSAT6 Satellite Satellite 0 830 1 8 633 3542 229 28 50 chrUextra 6337357 6338835 -22665821 - SAR_DM Satellite Satellite -371 1444 1 8 633 591 266 61 32 chrUextra 6338533 6338878 -22665778 + XDMR_DM Unknown Unknown 6 360 0 8 633 1149 162 40 26 chrUextra 6338875 6339148 -22665508 - SAR_DM Satellite Satellite -674 798 522 8 633 3370 186 31 10 chrUextra 6339253 6340078 -22664578 - SAR_DM Satellite Satellite -435 1037 195 8 633 660 124 0 0 chrUextra 6339985 6340098 -22664558 + ARS406_DM Unknown Unknown 1 113 -240 8 633 2021 193 99 39 chrUextra 6340209 6340906 -22663750 - TAHRE LINE telomeric -9707 756 18 8 633 605 67 11 11 chrUextra 6340955 6341046 -22663610 - HETA LINE telomeric -5 6076 5986 8 633 7249 6 0 0 chrUextra 6341146 6341994 -22662662 + R1_DM LINE R1 2486 3333 -2023 8 633 963 67 0 0 chrUextra 6342094 6342228 -22662428 + ROO_I LTR Pao 8123 8256 0 8 633 2708 27 24 0 chrUextra 6342228 6342563 -22662093 + ROO_LTR LTR Pao 1 343 -85 8 633 2567 33 8 6 chrUextra 6342577 6342942 -22661714 + S_DM DNA Tc1 1 366 -1370 8 633 4547 7 0 0 chrUextra 6343990 6344544 -22660112 - Invader2_I LTR Gypsy -1699 2893 2340 8 633 2202 37 0 3 chrUextra 6344542 6344838 -22659818 - Invader2_I LTR Gypsy -2648 1944 1650 8 633 22 35 0 0 chrUextra 6345200 6345229 -22659427 + AT_rich Low_complexity Low_complexity 1 29 0 8 633 51 31 0 0 chrUextra 6345404 6345469 -22659187 + AT_rich Low_complexity Low_complexity 1 65 0 8 633 998 150 0 5 chrUextra 6345892 6346086 -22658570 - NTS_DM Other Other -47 193 1 8 633 285 104 21 0 chrUextra 6346168 6346216 -22658440 - NTS_DM Other Other -191 49 1 8 633 548 121 106 29 chrUextra 6346216 6346386 -22658270 - NTS_DM Other Other 0 240 58 8 633 540 214 0 0 chrUextra 6346425 6346603 -22658053 + (CATAA)n Simple_repeat Simple_repeat 2 179 0 8 633 374 272 0 0 chrUextra 6346609 6346734 -22657922 + (CATAG)n Simple_repeat Simple_repeat 1 125 0 8 633 6220 42 38 20 chrUextra 6346834 6347682 -22656974 - Copia2_I LTR Copia -544 3618 2756 8 633 22 35 0 0 chrUextra 6347820 6347849 -22656807 + AT_rich Low_complexity Low_complexity 1 29 0 8 633 58 15 0 0 chrUextra 6348024 6348089 -22656567 + AT_rich Low_complexity Low_complexity 1 65 0 8 633 216 121 51 17 chrUextra 6348571 6348630 -22656026 + (TTA)n Simple_repeat Simple_repeat 2 62 0 8 633 2775 72 14 40 chrUextra 6348731 6349177 -22655479 - Gypsy12_I LTR Gypsy -5107 439 6 8 633 488 51 49 25 chrUextra 6349176 6349257 -22655399 - Gypsy12_I LTR Gypsy -5459 87 5 8 633 1657 118 111 9 chrUextra 6349254 6349578 -22655078 - Gypsy12A_LTR LTR Gypsy -45 2235 1879 8 633 3265 31 101 4 chrUextra 6349678 6350134 -22654522 + IDEFIX_LTR LTR Gypsy 95 594 0 8 633 703 80 0 94 chrUextra 6350140 6350278 -22654378 - MDG1_I LTR Gypsy -5818 778 654 8 633 574 103 8 49 chrUextra 6350403 6350526 -22654130 - MDG1_I LTR Gypsy -6012 584 467 8 633 6979 18 2 1 chrUextra 6350626 6351467 -22653189 - FW_DM LINE Jockey -503 4189 3348 8 633 5860 106 0 0 chrUextra 6351574 6352422 -22652234 + HMSBEAGLE_I LTR Gypsy 4514 5361 -1168 8 633 6379 35 42 0 chrUextra 6352522 6353370 -22651286 + IDEFIX_I LTR Gypsy 1818 2701 -2927 8 633 6898 17 14 0 chrUextra 6353470 6354314 -22650342 - BLOOD_I LTR Gypsy -3579 3034 2179 8 633 2230 120 20 32 chrUextra 6354420 6355266 -22649390 + DMSAT6 Satellite Satellite 1 835 -64 8 633 427 139 13 0 chrUextra 6355366 6355445 -22649211 + ARS406_DM Unknown Unknown 108 187 -166 8 633 2749 213 29 13 chrUextra 6355385 6356214 -22648442 - SAR_DM Satellite Satellite -242 1230 389 8 633 1481 6 0 0 chrUextra 6356314 6356488 -22648168 + Copia2_LTR_DM LTR Copia 25 198 0 8 633 25 51 0 0 chrUextra 6356528 6356567 -22648089 + AT_rich Low_complexity Low_complexity 1 39 0 8 633 640 90 10 0 chrUextra 6357262 6357362 -22647294 - SAR_DM Satellite Satellite -643 829 729 8 633 1901 164 21 11 chrUextra 6357373 6358110 -22646546 - SAR_DM Satellite Satellite -836 744 1 8 633 2668 19 0 0 chrUextra 6358210 6358529 -22646127 + R1_DM LINE R1 5038 5356 0 8 633 4556 11 0 0 chrUextra 6358527 6359058 -22645598 + LSU-rRNA_Dme rRNA rRNA 2640 3170 -730 8 633 1886 286 29 20 chrUextra 6359202 6359997 -22644659 - ROVER-I_DM LTR Gypsy -4933 1651 850 8 633 34 24 0 0 chrUextra 6360199 6360240 -22644416 + AT_rich Low_complexity Low_complexity 1 41 0 8 633 21 95 0 0 chrUextra 6360453 6360516 -22644140 + AT_rich Low_complexity Low_complexity 1 63 0 8 633 3183 12 0 59 chrUextra 6360528 6360954 -22643702 + LSU-rRNA_Dme rRNA rRNA 1 401 -3499 8 633 7285 1 0 0 chrUextra 6361054 6361902 -22642754 - Invader3_I LTR Gypsy -2418 2470 1623 8 633 3411 168 24 23 chrUextra 6362016 6362849 -22641807 + SAR_DM Satellite Satellite 326 1159 -313 8 633 3903 64 4 4 chrUextra 6362951 6363481 -22641175 - R1_DM LINE R1 -4826 530 1 8 633 2322 28 14 0 chrUextra 6363514 6363798 -22640858 - R1_DM LINE R1 0 5356 5069 8 633 1334 121 29 0 chrUextra 6364203 6364442 -22640214 + DNAREP1_DM LINE Penelope 1 246 -348 8 633 6161 73 13 9 chrUextra 6364846 6365694 -22638962 + Gypsy12_I LTR Gypsy 4332 5182 -364 8 633 3200 5 3 0 chrUextra 6366250 6366642 -22638014 + IDEFIX_I LTR Gypsy 4266 4658 -970 8 633 449 15 131 5 chrUextra 6366744 6366950 -22637706 + (TA)n Simple_repeat Simple_repeat 1 231 0 8 633 1832 264 22 18 chrUextra 6366955 6367584 -22637072 - FROGGER_I LTR Copia -154 1923 1292 8 633 6179 35 46 8 chrUextra 6367709 6368538 -22636118 - DOC3_DM LINE Jockey -717 4023 3164 8 633 6318 28 67 18 chrUextra 6368638 6369484 -22635172 + Gypsy12_I LTR Gypsy 363 1250 -4296 8 633 238 89 0 82 chrUextra 6369588 6369637 -22635019 - DMCR1A LINE CR1 -4424 46 2 8 633 26 82 0 0 chrUextra 6370193 6370254 -22634402 + AT_rich Low_complexity Low_complexity 1 61 0 8 633 1197 0 0 0 chrUextra 6370534 6370674 -22633982 - NOMAD_I LTR Gypsy -6432 140 1 8 633 4527 0 0 0 chrUextra 6370674 6371192 -22633464 - NOMAD_LTR LTR Gypsy 0 518 1 8 633 1944 13 0 0 chrUextra 6372426 6372651 -22632005 - Invader1_I LTR Gypsy -2961 225 1 8 633 3579 14 2 0 chrUextra 6372651 6373073 -22631583 - Invader1_LTR LTR Gypsy 0 423 1 8 633 1712 10 0 0 chrUextra 6373073 6373273 -22631383 - CIRCE LINE Composite -1984 4372 4173 8 633 7083 11 1 1 chrUextra 6373373 6374220 -22630436 + R1_DM LINE R1 3451 4297 -1059 8 633 3381 196 15 21 chrUextra 6374320 6375166 -22629490 + SAR_DM Satellite Satellite 1 840 -208 8 633 322 156 61 24 chrUextra 6375948 6376112 -22628544 + GA-rich Low_complexity Low_complexity 5 174 0 8 633 3106 185 14 22 chrUextra 6377161 6378008 -22626648 - SAR_DM Satellite Satellite -559 840 1 8 633 5435 57 1 14 chrUextra 6378110 6378955 -22625701 + CIRCE LINE Composite 2287 3170 -3186 8 633 1519 86 12 8 chrUextra 6379056 6379313 -22625343 + S_DM DNA Tc1 163 420 -1316 8 633 1466 74 0 0 chrUextra 6379312 6379542 -22625114 + S_DM DNA Tc1 1507 1736 0 8 633 1181 42 6 0 chrUextra 6379542 6379701 -22624955 + CIRCE LINE Composite 4493 4652 -1704 8 633 395 66 0 0 chrUextra 6379702 6379763 -22624893 + CIRCE LINE Composite 4561 4621 -1735 8 633 1110 56 0 0 chrUextra 6379759 6379902 -22624754 + CIRCE LINE Composite 4838 4980 -1376 8 633 828 329 16 8 chrUextra 6380007 6380626 -22624030 - TABOR_I LTR Gypsy -3362 2974 2351 8 633 753 127 8 47 chrUextra 6380951 6381118 -22623538 - Gypsy12_I LTR Gypsy -4870 676 459 8 633 1754 87 20 37 chrUextra 6381131 6381430 -22623226 - Gypsy12_I LTR Gypsy -5206 340 47 8 633 1512 195 16 27 chrUextra 6381427 6381796 -22622860 - Gypsy12_LTR LTR Gypsy -1938 398 34 8 633 3571 176 12 18 chrUextra 6381896 6382737 -22621919 + SAR_DM Satellite Satellite 212 1047 -425 8 633 3329 178 19 20 chrUextra 6382858 6383690 -22620966 + SAR_DM Satellite Satellite 326 1156 -316 8 633 529 0 0 0 chrUextra 6383790 6383851 -22620805 - BLASTOPIA_I LTR Gypsy -4420 61 1 8 633 2092 19 7 11 chrUextra 6383851 6384123 -22620533 - BLASTOPIA_LTR LTR Gypsy 0 275 5 8 633 1161 118 0 0 chrUextra 6384123 6384301 -22620355 + (CATA)n Simple_repeat Simple_repeat 3 180 0 8 633 1158 122 0 0 chrUextra 6384301 6384633 -22620023 + (TA)n Simple_repeat Simple_repeat 1 332 0 8 633 26 0 0 0 chrUextra 6385136 6385162 -22619494 + AT_rich Low_complexity Low_complexity 1 26 0 8 633 6845 19 6 1 chrUextra 6385684 6386531 -22618125 - R1_DM LINE R1 -1092 4264 3414 8 633 2088 216 30 44 chrUextra 6386631 6387478 -22617178 + SAR_DM Satellite Satellite 1 835 -396 8 633 4529 23 96 0 chrUextra 6387578 6388390 -22616266 - NINJA_I LTR Pao -3167 2844 1955 8 633 4620 4 0 2 chrUextra 6388525 6389026 -22615630 - R2_DM LINE R2 -3080 527 28 8 633 3224 0 0 0 chrUextra 6389027 6389372 -22615284 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2237 8 633 1312 197 16 13 chrUextra 6389472 6389785 -22614871 - SAR_DM Satellite Satellite -677 795 482 8 633 1978 128 12 28 chrUextra 6390420 6390741 -22613915 - GTWIN_LTR LTR Gypsy -179 316 1 8 633 4333 40 0 0 chrUextra 6390741 6391266 -22613390 - QUASIMODO_I LTR Gypsy -1808 4252 3728 8 633 28 79 0 0 chrUextra 6392030 6392093 -22612563 + AT_rich Low_complexity Low_complexity 1 63 0 8 633 3577 186 22 21 chrUextra 6392313 6393160 -22611496 + SAR_DM Satellite Satellite 355 1202 -270 8 633 4679 16 1 2 chrUextra 6393260 6394107 -22610549 - STALKER4_I LTR Gypsy -3625 2905 1990 8 633 3048 167 20 11 chrUextra 6394207 6395048 -22609608 - SAR_DM Satellite Satellite -404 849 1 8 633 2651 96 46 18 chrUextra 6395154 6396001 -22608655 + DMSAT6 Satellite Satellite 1 870 -3 8 633 1057 15 0 0 chrUextra 6396101 6396232 -22608424 + DOC2_DM LINE Jockey 4663 4793 0 8 633 6019 27 34 4 chrUextra 6396237 6396948 -22607708 + TAHRE LINE telomeric 1158 1889 -8574 8 633 2993 130 43 2 chrUextra 6397048 6397894 -22606762 - DOC3_DM LINE Jockey -306 4434 3674 8 633 7397 19 17 2 chrUextra 6397995 6398840 -22605816 + Gypsy4_I LTR Gypsy 5232 6088 -200 8 633 2966 0 0 3 chrUextra 6398942 6399265 -22605391 + R1_DM LINE R1 5035 5356 0 8 633 4754 13 2 4 chrUextra 6399259 6399789 -22604867 + R2_DM LINE R2 1665 2193 -1414 8 633 459 0 18 0 chrUextra 6399889 6399946 -22604710 + TABOR_I LTR Gypsy 6279 6336 0 8 633 2316 8 0 0 chrUextra 6399944 6400195 -22604461 + TABOR_LTR LTR Gypsy 1 251 -255 8 633 4936 11 2 0 chrUextra 6400185 6400736 -22603920 - DMRT1B LINE R1 -2980 2203 1652 8 633 2607 101 27 8 chrUextra 6400836 6401683 -22602973 + DMSAT6 Satellite Satellite 1 863 -40 8 633 6478 45 28 12 chrUextra 6401783 6402630 -22602026 - R1_DM LINE R1 -4125 1231 371 8 633 963 87 0 0 chrUextra 6402730 6402868 -22601788 + ARS406_DM Unknown Unknown 52 189 -164 8 633 3378 204 14 18 chrUextra 6402745 6403576 -22601080 - SAR_DM Satellite Satellite -535 827 1 8 633 3560 12 2 0 chrUextra 6403676 6404075 -22600581 + R1_DM LINE R1 4957 5356 0 8 633 3211 61 10 5 chrUextra 6404108 6404522 -22600134 + R1_DM LINE R1 1 416 -4940 8 633 2607 102 14 17 chrUextra 6404622 6405468 -22599188 - DMSAT6 Satellite Satellite -23 843 1 8 633 28 48 0 0 chrUextra 6406035 6406077 -22598579 + AT_rich Low_complexity Low_complexity 1 42 0 8 633 7528 9 2 1 chrUextra 6406514 6407360 -22597296 - G_DM LINE Jockey -2326 2020 1174 8 633 1769 326 16 6 chrUextra 6407676 6408306 -22596350 + Gypsy6_I LTR Gypsy 945 1580 -5432 8 633 3495 183 29 20 chrUextra 6408406 6409252 -22595404 + SAR_DM Satellite Satellite 1 853 -202 8 633 2502 90 30 39 chrUextra 6409385 6410197 -22594459 - DMSAT6 Satellite Satellite 0 803 1 8 633 2977 14 0 6 chrUextra 6410298 6410654 -22594002 + TART LINE telomeric 14124 14477 0 8 633 1043 235 165 35 chrUextra 6410660 6411144 -22593512 + TART LINE telomeric 3235 3781 -10696 8 633 323 224 11 34 chrUextra 6411624 6411712 -22592944 - Gypsy6_LTR LTR Gypsy -168 239 154 8 633 705 193 7 14 chrUextra 6412219 6412361 -22592295 + HETRP_DM Satellite Satellite 1529 1669 -203 8 633 692 185 7 15 chrUextra 6412497 6412634 -22592022 + HETRP_DM Satellite Satellite 1529 1664 -208 8 633 642 221 13 25 chrUextra 6412777 6412935 -22591721 + HETRP_DM Satellite Satellite 1529 1684 -188 8 633 3584 226 14 14 chrUextra 6413140 6413979 -22590677 - TABOR_I LTR Gypsy -1456 4880 4042 8 633 7268 26 1 0 chrUextra 6414082 6414921 -22589735 + R1_DM LINE R1 3946 4785 -571 8 633 628 320 52 20 chrUextra 6415168 6415678 -22588978 + TIRANT_I LTR Gypsy 3586 3921 -3771 8 633 1455 34 43 9 chrUextra 6415612 6415823 -22588833 + TLD2 Unknown Unknown 1 218 0 8 633 6573 53 60 3 chrUextra 6415974 6416820 -22587836 + DMCR1A LINE CR1 1832 2725 -1745 8 633 3591 181 13 11 chrUextra 6416920 6417766 -22586890 - SAR_DM Satellite Satellite -470 848 1 8 633 21 95 0 0 chrUextra 6417900 6417963 -22586693 + AT_rich Low_complexity Low_complexity 1 63 0 8 633 34 24 0 0 chrUextra 6418176 6418217 -22586439 + AT_rich Low_complexity Low_complexity 1 41 0 8 633 2906 182 58 16 chrUextra 6418812 6419658 -22584998 + SAR_DM Satellite Satellite 1 881 -203 8 633 1607 17 0 0 chrUextra 6419758 6419935 -22584721 + PROTOP_A DNA P 929 1105 0 8 633 976 58 0 0 chrUextra 6419935 6420056 -22584600 + TART LINE telomeric 10539 10659 -3818 8 633 1703 185 19 60 chrUextra 6420106 6420590 -22584066 + TAHRE LINE telomeric 18 481 -9982 8 633 4149 173 8 9 chrUextra 6420705 6421544 -22583112 - SAR_DM Satellite Satellite -440 1032 195 8 633 1245 94 0 0 chrUextra 6421656 6421869 -22582787 + (TCTCC)n Simple_repeat Simple_repeat 1 213 0 8 633 1620 5 0 2 chrUextra 6421879 6422270 -22582386 + (GAGAA)n Simple_repeat Simple_repeat 1 390 0 8 634 41 0 0 0 chrUextra 6422596 6422637 -22582019 + AT_rich Low_complexity Low_complexity 1 41 0 8 634 635 67 32 31 chrUextra 6423152 6423266 -22581390 - BATUMI_LTR LTR Pao -152 120 35 8 634 1289 70 0 11 chrUextra 6423266 6423440 -22581216 - BATUMI_I LTR Pao 0 7963 7792 8 634 7488 5 12 1 chrUextra 6423542 6424388 -22580268 - G_DM LINE Jockey -3200 1146 292 8 634 2067 187 8 7 chrUextra 6424488 6425315 -22579341 + SAR_DM Satellite Satellite 1 827 -558 8 634 323 306 32 98 chrUextra 6425677 6425923 -22578733 + ACCORD2_I LTR Gypsy 526 755 -6457 8 634 2608 48 18 0 chrUextra 6425950 6426280 -22578376 - IDEFIX_I LTR Gypsy -1793 3835 3500 8 634 2538 95 26 18 chrUextra 6426381 6427226 -22577430 - DMSAT6 Satellite Satellite -17 851 1 8 634 4309 8 16 0 chrUextra 6427326 6427813 -22576843 + Copia2_I LTR Copia 629 1123 -3039 8 634 3262 11 0 11 chrUextra 6427797 6428171 -22576485 + Copia2_I LTR Copia 1226 1595 -2567 8 634 6133 45 15 48 chrUextra 6428271 6429116 -22575540 - BATUMI_I LTR Pao -5145 2818 2002 8 634 5028 25 22 0 chrUextra 6429216 6429807 -22574849 + R1_DM LINE R1 4753 5356 0 8 634 1733 55 9 0 chrUextra 6429840 6430060 -22574596 + R1_DM LINE R1 1 222 -5134 8 634 2480 4 0 4 chrUextra 6430161 6430432 -22574224 + TABOR_LTR LTR Gypsy 237 506 0 8 634 1024 42 0 40 chrUextra 6430432 6430554 -22574102 + STALKER4_I LTR Gypsy 6415 6530 0 8 634 3387 50 1 16 chrUextra 6430554 6430992 -22573664 + STALKER4_LTR LTR Gypsy 1 399 -3 8 634 1488 26 21 5 chrUextra 6431106 6431298 -22573358 - PROTOP DNA P -514 3966 3772 8 634 5311 26 27 6 chrUextra 6431295 6431951 -22572705 - PROTOP DNA P -3182 1298 629 8 634 33 43 0 41 chrUextra 6432228 6432301 -22572355 + AT_rich Low_complexity Low_complexity 1 70 0 8 634 37 23 0 0 chrUextra 6432392 6432436 -22572220 + AT_rich Low_complexity Low_complexity 1 44 0 8 634 21 0 0 0 chrUextra 6432457 6432478 -22572178 + AT_rich Low_complexity Low_complexity 1 21 0 8 634 1546 12 0 0 chrUextra 6432726 6432896 -22571760 - PROTOP_A DNA P -87 1018 849 8 634 1721 113 42 45 chrUextra 6432996 6433329 -22571327 + Stalker2_I LTR Gypsy 572 903 -6499 8 634 23 0 0 0 chrUextra 6433443 6433466 -22571190 + AT_rich Low_complexity Low_complexity 1 23 0 8 634 239 346 26 19 chrUextra 6433540 6433808 -22570848 + BLOOD_I LTR Gypsy 1456 1725 -4888 8 634 3417 189 9 8 chrUextra 6433943 6434786 -22569870 + SAR_DM Satellite Satellite 1 843 -539 8 634 2673 78 38 25 chrUextra 6434886 6435731 -22568925 - DMSAT6 Satellite Satellite -33 855 1 8 634 7116 23 1 8 chrUextra 6435831 6436676 -22567980 + QUASIMODO_I LTR Gypsy 660 1498 -4562 8 634 3680 180 22 19 chrUextra 6436776 6437608 -22567048 - SAR_DM Satellite Satellite -459 1013 180 8 634 510 176 16 25 chrUextra 6437499 6437621 -22567035 + ARS406_DM Unknown Unknown 1 121 -232 8 634 3535 193 16 25 chrUextra 6437725 6438565 -22566091 - SAR_DM Satellite Satellite -216 1256 425 8 634 3539 5 0 0 chrUextra 6438666 6439058 -22565598 - DMRT1B LINE R1 -2663 2520 2129 8 634 2881 9 0 0 chrUextra 6439057 6439377 -22565279 - DMRT1B LINE R1 -3159 2024 1705 8 634 337 277 0 10 chrUextra 6439406 6439508 -22565148 + Copia_I LTR Copia 3721 3821 -772 8 634 2660 89 90 117 chrUextra 6439611 6440122 -22564534 + Invader1_I LTR Gypsy 2690 3186 0 8 634 1960 111 57 24 chrUextra 6440123 6440456 -22564200 + Invader1_LTR LTR Gypsy 2 345 -78 8 634 3978 185 7 8 chrUextra 6440556 6441389 -22563267 + SAR_DM Satellite Satellite 245 1076 -396 8 634 7215 27 9 1 chrUextra 6441501 6442346 -22562310 + R1_DM LINE R1 4160 5011 -345 8 634 5603 81 93 21 chrUextra 6442446 6443291 -22561365 + TART_B1 LINE telomeric 3192 4097 -6557 8 634 7574 5 12 0 chrUextra 6443391 6444236 -22560420 - DM176_I LTR Gypsy -1959 4461 3607 8 634 1015 62 0 6 chrUextra 6444338 6444501 -22560155 + DM297_I LTR Gypsy 1122 1283 -4884 8 634 2394 18 3 0 chrUextra 6444509 6444795 -22559861 - Gypsy4_LTR LTR Gypsy 0 287 1 8 634 3030 26 36 5 chrUextra 6444795 6445181 -22559475 - Gypsy4_I LTR Gypsy 0 6288 5891 8 634 2312 122 30 8 chrUextra 6445289 6446126 -22558530 - DMSAT6 Satellite Satellite -2 855 1 8 634 6994 6 0 14 chrUextra 6446226 6447071 -22557585 - Invader3_I LTR Gypsy -2541 2347 1515 8 634 3368 192 15 21 chrUextra 6447171 6448016 -22556640 - SAR_DM Satellite Satellite -487 840 1 8 634 535 296 43 47 chrUextra 6448122 6448195 -22556461 + GTWIN_I LTR Gypsy 2545 2662 -3759 8 634 1392 47 19 0 chrUextra 6448195 6448409 -22556247 + TLD2 Unknown Unknown 1 218 0 8 634 535 296 43 47 chrUextra 6448409 6448944 -22555712 + GTWIN_I LTR Gypsy 2663 3538 -2883 8 634 342 0 0 0 chrUextra 6449061 6449099 -22555557 + (CTCGG)n Simple_repeat Simple_repeat 1 38 0 8 634 1164 73 0 0 chrUextra 6449099 6449276 -22555380 + (TTCTC)n Simple_repeat Simple_repeat 2 178 0 8 634 212 171 0 0 chrUextra 6449673 6449714 -22554942 + (GTTTG)n Simple_repeat Simple_repeat 3 43 0 8 634 5937 73 4 1 chrUextra 6450006 6450851 -22553805 + TART LINE telomeric 295 1141 -13336 8 634 438 336 9 9 chrUextra 6451896 6452112 -22552544 + GTWIN_I LTR Gypsy 3323 3538 -2883 8 634 2792 204 18 25 chrUextra 6452853 6453686 -22550970 - SAR_DM Satellite Satellite -535 826 1 8 634 5407 6 0 0 chrUextra 6453786 6454417 -22550239 - FW_DM LINE Jockey -1083 3609 2979 8 634 1129 101 24 9 chrUextra 6454416 6454627 -22550029 + DMSAT6 Satellite Satellite 254 467 -3 8 634 6669 18 0 26 chrUextra 6454731 6455576 -22549080 + G_DM LINE Jockey 3093 3915 -431 8 634 1897 24 0 0 chrUextra 6455676 6455926 -22548730 - TART LINE telomeric -13598 879 630 8 634 3046 158 7 12 chrUextra 6455925 6456521 -22548135 - TAHRE LINE telomeric -12 10451 9859 8 634 6752 32 8 0 chrUextra 6456621 6457466 -22547190 - DMCR1A LINE CR1 -1674 2796 1945 8 634 3025 172 113 26 chrUextra 6457568 6458410 -22546246 - HETA LINE telomeric -211 5870 5063 8 634 1897 14 0 0 chrUextra 6459456 6459677 -22544979 + DMRT1B LINE R1 4963 5183 0 8 634 3799 11 32 0 chrUextra 6459839 6460301 -22544355 + DMRT1A LINE R1 3194 3670 -1513 8 634 6942 29 1 0 chrUextra 6460404 6461246 -22543410 - Gypsy12_I LTR Gypsy -2253 3293 2451 8 634 5619 26 0 7 chrUextra 6461346 6462050 -22542606 + FW_DM LINE Jockey 3994 4692 0 8 634 254 29 0 0 chrUextra 6462060 6462094 -22542562 - R1_DM LINE R1 -3966 1390 1357 8 634 659 32 21 11 chrUextra 6462094 6462189 -22542467 - R1_DM LINE R1 -4150 1206 1111 8 634 1609 5 40 0 chrUextra 6462290 6462488 -22542168 + R1_DM LINE R1 4861 5066 -290 8 634 924 44 0 0 chrUextra 6462485 6462599 -22542057 + R1_DM LINE R1 5243 5356 0 8 634 3685 60 8 4 chrUextra 6462632 6463134 -22541522 + R1_DM LINE R1 1 504 -4852 8 634 3708 177 7 15 chrUextra 6463234 6464078 -22540578 - SAR_DM Satellite Satellite -362 1110 274 8 634 189 0 0 0 chrUextra 6464722 6464743 -22539913 + (CTG)n Simple_repeat Simple_repeat 3 23 0 8 634 270 194 0 61 chrUextra 6464772 6464871 -22539785 - ROO_I LTR Pao -7523 733 641 8 634 3586 179 11 9 chrUextra 6465124 6465965 -22538691 - SAR_DM Satellite Satellite -417 1055 214 8 634 4431 6 21 0 chrUextra 6466066 6466593 -22538063 + TAHRE LINE telomeric 9915 10452 -11 8 634 1803 50 11 18 chrUextra 6466620 6466910 -22537746 + HETA LINE telomeric 1 243 -5838 8 634 3277 191 14 21 chrUextra 6467010 6467852 -22536804 + SAR_DM Satellite Satellite 1 835 -216 8 634 4130 194 18 0 chrUextra 6467958 6468798 -22535858 + ROVER-I_DM LTR Gypsy 3556 4410 -2174 8 634 4490 18 32 0 chrUextra 6469187 6469742 -22534914 + PROTOP_A DNA P 1 573 -532 8 634 1424 12 0 6 chrUextra 6469842 6470013 -22534643 - BATUMI_I LTR Pao -2924 5039 4870 8 634 3706 114 5 8 chrUextra 6470008 6470686 -22533970 - BATUMI_I LTR Pao -2879 5035 4281 8 634 2338 7 0 0 chrUextra 6470786 6471062 -22533594 - DM176_LTR LTR Gypsy -231 276 1 8 634 472 58 0 232 chrUextra 6471064 6471176 -22533480 + DNAREP1_DM LINE Penelope 500 585 -9 8 634 21 0 0 0 chrUextra 6471261 6471282 -22533374 + AT_rich Low_complexity Low_complexity 1 21 0 8 634 304 174 23 0 chrUextra 6471377 6471456 -22533200 - PROTOP_A DNA P -981 124 43 8 634 1548 11 0 0 chrUextra 6472676 6472854 -22531802 + (TTATA)n Simple_repeat Simple_repeat 3 180 0 8 634 1620 0 0 0 chrUextra 6472876 6473112 -22531544 + (TTATA)n Simple_repeat Simple_repeat 1 236 0 8 634 3552 2 0 0 chrUextra 6473112 6473518 -22531138 + ROO_LTR LTR Pao 2 407 -21 8 634 3071 21 8 0 chrUextra 6473618 6474004 -22530652 + ROO_I LTR Pao 3817 4205 -4051 8 634 3747 22 0 0 chrUextra 6474001 6474462 -22530194 - FW_DM LINE Jockey 0 4692 4232 8 634 7196 2 1 2 chrUextra 6474562 6475406 -22529250 - LSU-rRNA_Dme rRNA rRNA -2458 1442 600 8 634 1545 19 0 0 chrUextra 6475508 6475923 -22528733 + (TTATA)n Simple_repeat Simple_repeat 1 415 0 8 634 2286 4 0 0 chrUextra 6475925 6476201 -22528455 + Copia_LTR LTR Copia 1 276 0 8 634 232 0 0 0 chrUextra 6476201 6476235 -22528421 + Copia_LTR LTR Copia 243 276 0 8 634 627 67 67 0 chrUextra 6476235 6476339 -22528317 + Copia_I LTR Copia 1 111 -4482 8 634 981 74 0 0 chrUextra 6476450 6476598 -22528058 - ARS406_DM Unknown Unknown -177 176 29 8 634 2733 201 22 19 chrUextra 6476598 6477291 -22527365 + SAR_DM Satellite Satellite 1 695 -208 8 634 1752 18 9 0 chrUextra 6477394 6477615 -22527041 - MDG3_LTR LTR Gypsy -44 223 1 8 634 3448 9 93 0 chrUextra 6477615 6478058 -22526598 - QUASIMODO_LTR LTR Gypsy -174 484 1 8 634 1388 17 0 0 chrUextra 6478058 6478238 -22526418 - QUASIMODO_I LTR Gypsy 0 6060 5881 8 634 356 196 0 19 chrUextra 6478338 6478442 -22526214 + XDMR_DM Unknown Unknown 259 360 0 8 634 2981 168 31 45 chrUextra 6478356 6479160 -22525496 - SAR_DM Satellite Satellite -354 1118 326 8 634 6883 19 1 1 chrUextra 6479282 6480126 -22524530 - R1_DM LINE R1 -1137 4219 3376 8 634 1078 207 22 0 chrUextra 6480226 6480453 -22524203 - ROVER-I_DM LTR Gypsy -4161 2423 2192 8 634 575 75 65 0 chrUextra 6480510 6480603 -22524053 - ROVER-LTR_DM LTR Gypsy -268 99 1 8 634 418 98 158 0 chrUextra 6480603 6480679 -22523977 - DM412B_LTR LTR Gypsy -326 245 157 8 634 564 156 0 9 chrUextra 6480679 6480789 -22523867 - DM412 LTR Gypsy -3 6894 6786 8 634 2181 53 0 0 chrUextra 6480788 6481070 -22523586 + ROOA_I LTR Pao 1615 1896 -4953 8 634 1585 306 18 13 chrUextra 6481227 6481991 -22522665 + MICROPIA_I LTR Gypsy 2253 2970 -1506 8 634 6428 11 0 0 chrUextra 6482114 6482958 -22521698 + DMRT1B LINE R1 1120 2069 -3114 8 634 1165 14 0 0 chrUextra 6483058 6483199 -22521457 + TRANSPAC_I LTR Gypsy 4450 4590 0 8 634 2879 3 0 0 chrUextra 6483198 6483528 -22521128 + TRANSPAC_LTR LTR Gypsy 1 330 0 8 634 2988 16 3 3 chrUextra 6483528 6483902 -22520754 + STALKER4_I LTR Gypsy 1170 1543 -4987 8 634 5127 2 0 0 chrUextra 6484002 6484587 -22520069 - LSU-rRNA_Dme rRNA rRNA -676 3224 2640 8 634 519 0 0 16 chrUextra 6484585 6484649 -22520007 - R1_DM LINE R1 0 5356 5294 8 634 1760 5 0 5 chrUextra 6484641 6484846 -22519810 - LSU-rRNA_Dme rRNA rRNA -1252 2648 2445 8 634 1343 12 0 6 chrUextra 6484946 6485110 -22519546 + STALKER4_LTR LTR Gypsy 240 402 0 8 634 5014 38 35 1 chrUextra 6485137 6485790 -22518866 - R1_DM LINE R1 -3787 1569 895 8 634 3417 187 14 18 chrUextra 6485890 6486734 -22517922 + SAR_DM Satellite Satellite 375 1215 -257 8 634 1772 0 5 0 chrUextra 6487778 6487987 -22516669 - STALKER4_LTR LTR Gypsy -192 210 1 8 634 1200 130 0 0 chrUextra 6487987 6488186 -22516470 + ROVER-I_DM LTR Gypsy 5110 5308 -1276 8 634 676 218 0 11 chrUextra 6488221 6488397 -22516259 + ROVER-I_DM LTR Gypsy 5990 6163 -421 8 634 3515 17 0 0 chrUextra 6488722 6489143 -22515513 - PROTOP_A DNA P -684 421 1 8 634 1379 51 10 5 chrUextra 6489143 6489340 -22515316 + TART_B1 LINE telomeric 3431 3628 -7026 8 634 1480 83 0 48 chrUextra 6489338 6489565 -22515091 + TART_B1 LINE telomeric 4415 4630 -6024 8 634 3762 171 7 11 chrUextra 6489672 6490510 -22514146 + SAR_DM Satellite Satellite 195 1029 -443 8 634 2113 98 34 11 chrUextra 6490610 6490961 -22513695 + MDG1_I LTR Gypsy 3 361 -6235 8 634 2948 68 18 7 chrUextra 6490958 6491416 -22513240 + MDG1_I LTR Gypsy 672 1134 -5462 8 634 3198 5 0 5 chrUextra 6491555 6491951 -22512705 + DOC LINE Jockey 4332 4725 0 8 634 1778 252 0 0 chrUextra 6491974 6492398 -22512258 + Gypsy6_I LTR Gypsy 2931 3354 -3658 8 634 7197 0 0 0 chrUextra 6492498 6493342 -22511314 - TAHRE LINE telomeric -2482 7981 7138 8 634 3436 185 9 11 chrUextra 6493443 6494257 -22510399 - SAR_DM Satellite Satellite -466 1006 195 8 634 703 124 0 0 chrUextra 6494164 6494285 -22510371 + ARS406_DM Unknown Unknown 1 121 -232 8 634 6912 19 17 0 chrUextra 6494385 6495228 -22509428 + FW_DM LINE Jockey 343 1199 -3493 8 634 2658 73 25 24 chrUextra 6495328 6496171 -22508485 - DMSAT6 Satellite Satellite -117 844 1 8 634 6661 31 19 1 chrUextra 6496271 6497114 -22507542 - R1_DM LINE R1 -1903 3453 2596 8 634 5194 24 43 0 chrUextra 6497214 6498057 -22506599 + PROTOP_A DNA P 50 928 -177 8 634 380 324 25 33 chrUextra 6498473 6498829 -22505827 - BURDOCK_I LTR Gypsy -4868 992 856 8 634 1489 6 0 0 chrUextra 6498829 6499000 -22505656 - PROTOP DNA P 0 4480 4310 8 634 6943 19 1 5 chrUextra 6499103 6499943 -22504713 - R1_DM LINE R1 -608 4748 3912 8 634 5016 33 42 10 chrUextra 6500043 6500718 -22503938 - ROO_I LTR Pao -3368 4888 4193 8 634 1342 13 0 0 chrUextra 6500727 6500886 -22503770 + FW_DM LINE Jockey 1750 1908 -2784 8 634 258 81 0 0 chrUextra 6501479 6501516 -22503140 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 634 4385 48 109 5 chrUextra 6501930 6502772 -22501884 + R1_DM LINE R1 625 1554 -3802 8 634 7384 1 0 0 chrUextra 6502872 6503715 -22500941 + MAX_I LTR Pao 6100 6942 -972 8 634 5880 95 0 2 chrUextra 6503824 6504658 -22499998 + Gypsy12_I LTR Gypsy 2487 3318 -2228 8 634 1512 38 61 5 chrUextra 6504758 6504971 -22499685 + DIVER2_I LTR Pao 2218 2442 -1705 8 634 2243 187 6 9 chrUextra 6505701 6506225 -22498431 - SAR_DM Satellite Satellite -455 1017 496 8 634 1489 161 3 7 chrUextra 6506240 6506541 -22498115 - SAR_DM Satellite Satellite -569 903 604 8 634 6857 14 11 0 chrUextra 6506644 6507487 -22497169 + R1_DM LINE R1 260 1111 -4245 8 634 6324 45 7 12 chrUextra 6507587 6508427 -22496229 - DMCR1A LINE CR1 -1499 2971 2136 8 634 5659 25 63 1 chrUextra 6508530 6509373 -22495283 + R1_DM LINE R1 3755 4649 -707 8 634 1534 19 23 18 chrUextra 6509473 6509693 -22494963 + NTS_DM Other Other 20 240 0 8 634 1755 17 17 17 chrUextra 6509693 6509933 -22494723 + NTS_DM Other Other 1 240 0 8 634 1861 0 17 13 chrUextra 6509933 6510172 -22494484 + NTS_DM Other Other 1 240 0 8 634 1180 14 0 0 chrUextra 6510172 6510316 -22494340 + NTS_DM Other Other 1 144 -96 8 634 247 195 207 0 chrUextra 6510451 6510533 -22494123 - XDMR_DM Unknown Unknown -7 353 255 8 634 1010 171 27 12 chrUextra 6510482 6511045 -22493611 + SAR_DM Satellite Satellite 1 570 -1040 8 634 830 174 35 10 chrUextra 6511056 6511259 -22493397 + SAR_DM Satellite Satellite 539 746 -726 8 634 6858 21 4 6 chrUextra 6511359 6512202 -22492454 - DM1731_I LTR Copia -91 3885 3045 8 634 3169 198 11 15 chrUextra 6512302 6513136 -22491520 + SAR_DM Satellite Satellite 1 830 -208 8 634 3498 185 18 24 chrUextra 6513246 6514079 -22490577 - SAR_DM Satellite Satellite -514 828 1 8 634 2680 54 0 0 chrUextra 6514188 6514538 -22490118 + DIVER_I LTR Pao 3309 3658 -1985 8 634 4152 20 0 0 chrUextra 6514535 6515031 -22489625 + DIVER_I LTR Pao 3797 4292 -1351 8 634 1349 0 0 0 chrUextra 6515131 6515291 -22489365 + DM176_I LTR Gypsy 6261 6420 0 8 634 4282 8 0 0 chrUextra 6515291 6515798 -22488858 + DM176_LTR LTR Gypsy 1 507 0 8 634 1510 16 6 0 chrUextra 6515798 6515972 -22488684 + LSU-rRNA_Dme rRNA rRNA 917 1091 -2809 8 634 3035 196 70 70 chrUextra 6517017 6517852 -22486804 + Gypsy3_I LTR Gypsy 137 971 -5206 8 634 1788 74 123 3 chrUextra 6518271 6518556 -22486100 - TART LINE telomeric -6877 7600 7282 8 634 268 0 0 0 chrUextra 6518557 6518588 -22486068 + NINJA_LTR LTR Pao 1 31 -286 8 634 1637 33 56 0 chrUextra 6518588 6518801 -22485855 - PROTOP_B DNA P 0 1153 929 8 634 3381 180 14 12 chrUextra 6519843 6520649 -22484007 - SAR_DM Satellite Satellite -471 1001 195 8 634 779 108 0 0 chrUextra 6520556 6520685 -22483971 + ARS406_DM Unknown Unknown 1 129 -224 8 634 26 30 0 0 chrUextra 6520837 6520870 -22483786 + AT_rich Low_complexity Low_complexity 1 33 0 8 634 21 89 0 0 chrUextra 6521007 6521063 -22483593 + AT_rich Low_complexity Low_complexity 1 56 0 8 634 2963 9 0 0 chrUextra 6521757 6522102 -22482554 + BS LINE Jockey 4782 5126 0 8 634 47 0 0 0 chrUextra 6522488 6522535 -22482121 + AT_rich Low_complexity Low_complexity 1 47 0 8 634 2457 172 30 100 chrUextra 6522743 6523511 -22481145 + Gypsy12A_LTR LTR Gypsy 1443 2156 -124 8 634 2405 117 16 9 chrUextra 6523613 6524427 -22480229 - DMSAT6 Satellite Satellite -90 820 1 8 634 3222 180 25 20 chrUextra 6524553 6525395 -22479261 - SAR_DM Satellite Satellite -1033 846 1 8 634 3875 28 0 4 chrUextra 6525495 6525992 -22478664 + CIRCE LINE Composite 4486 4980 -1376 8 634 872 104 14 7 chrUextra 6526190 6526335 -22478321 - Gypsy9_I LTR Gypsy -2778 1899 1754 8 634 5686 93 5 12 chrUextra 6526438 6527279 -22477377 + Gypsy12_I LTR Gypsy 1690 2524 -3022 8 634 1547 95 0 0 chrUextra 6527789 6528011 -22476645 + Gypsy12_I LTR Gypsy 2449 2670 -2876 8 634 1362 117 0 23 chrUextra 6528002 6528221 -22476435 + Gypsy12_I LTR Gypsy 2811 3024 -2522 8 634 2903 39 166 12 chrUextra 6528321 6528917 -22475739 + PROTOP_B DNA P 6 694 -459 8 634 21 0 0 0 chrUextra 6529093 6529114 -22475542 + AT_rich Low_complexity Low_complexity 1 21 0 8 634 4785 69 80 21 chrUextra 6529263 6530105 -22474551 + STALKER4_I LTR Gypsy 712 1602 -4928 8 634 1349 40 6 0 chrUextra 6530205 6530379 -22474277 + R1_DM LINE R1 1619 1793 -3563 8 634 1946 158 25 40 chrUextra 6530380 6530782 -22473874 + R1_DM LINE R1 310 705 -4651 8 634 1753 117 4 4 chrUextra 6530782 6531047 -22473609 + R1_DM LINE R1 1099 1363 -3993 8 634 2172 0 48 0 chrUextra 6531147 6531417 -22473239 - ROO_I LTR Pao -1236 7020 6738 8 634 4844 0 0 3 chrUextra 6531417 6531989 -22472667 - ROO_I LTR Pao -2320 5936 5367 8 634 6919 13 7 0 chrUextra 6532089 6532931 -22471725 + G_DM LINE Jockey 2250 3097 -1249 8 634 3348 128 18 25 chrUextra 6533031 6533741 -22470915 + MDG1_I LTR Gypsy 5736 6799 -98 8 634 1035 39 0 0 chrUextra 6533745 6533873 -22470783 + (TAA)n Simple_repeat Simple_repeat 3 130 0 8 634 4980 89 9 7 chrUextra 6534001 6534815 -22469841 + G2_DM LINE Jockey 4 664 -2438 8 634 828 147 0 0 chrUextra 6534915 6535065 -22469591 + SAR_DM Satellite Satellite 523 672 -800 8 634 324 321 0 0 chrUextra 6534968 6535105 -22469551 - XDMR Unknown Unknown -222 139 3 8 634 2519 178 22 18 chrUextra 6535127 6535757 -22468899 + SAR_DM Satellite Satellite 191 823 -649 8 634 679 121 0 160 chrUextra 6535861 6536048 -22468608 + DIVER_LTR LTR Pao 68 224 0 8 634 241 174 70 102 chrUextra 6536450 6536578 -22468078 - BS LINE Jockey -4967 159 36 8 634 455 113 0 0 chrUextra 6536581 6536652 -22468004 + DMCR1A LINE CR1 2526 2596 -1874 8 634 6623 26 33 5 chrUextra 6537741 6538583 -22466073 - FW_DM LINE Jockey -1695 2997 2132 8 634 2369 115 25 11 chrUextra 6538683 6539525 -22465131 - DMSAT6 Satellite Satellite -91 853 1 8 634 1726 0 0 0 chrUextra 6539625 6539824 -22464832 - R1_DM LINE R1 -356 5000 4802 8 634 5647 2 0 0 chrUextra 6539822 6540467 -22464189 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2011 8 634 1414 77 68 5 chrUextra 6540567 6540788 -22463868 + DMCR1A LINE CR1 1950 2184 -2286 8 634 334 103 0 0 chrUextra 6540788 6540846 -22463810 + DMCR1A LINE CR1 2317 2374 -2096 8 634 1357 74 139 0 chrUextra 6540851 6541067 -22463589 + DMCR1A LINE CR1 3066 3311 -1159 8 634 1232 63 132 0 chrUextra 6541086 6541276 -22463380 + DMCR1A LINE CR1 3828 4042 -428 8 634 21 71 0 0 chrUextra 6541350 6541392 -22463264 + AT_rich Low_complexity Low_complexity 1 42 0 8 634 2666 189 90 27 chrUextra 6541526 6542314 -22462342 + SAR_DM Satellite Satellite 370 1207 -265 8 634 490 229 45 35 chrUextra 6542150 6542349 -22462307 - XDMR_DM Unknown Unknown -7 353 153 8 634 320 161 10 147 chrUextra 6542461 6542563 -22462093 - DNAREP1_DM LINE Penelope -6 588 501 8 634 1085 50 12 6 chrUextra 6542567 6542729 -22461927 + S2_DM DNA Tc1 1 163 -1572 8 634 314 173 0 58 chrUextra 6542755 6542841 -22461815 - DNAREP1_DM LINE Penelope -26 568 488 8 634 240 175 117 58 chrUextra 6542964 6543067 -22461589 - Gypsy2_LTR LTR Gypsy -150 203 95 8 634 492 269 0 125 chrUextra 6543081 6543289 -22461367 - Gypsy2_I LTR Gypsy -91 6044 5863 8 634 246 150 0 0 chrUextra 6543455 6543495 -22461161 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 634 246 150 0 0 chrUextra 6543547 6543587 -22461069 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 634 255 125 0 0 chrUextra 6543630 6543670 -22460986 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 634 22 56 0 0 chrUextra 6543683 6543719 -22460937 + AT_rich Low_complexity Low_complexity 1 36 0 8 634 4302 4 0 0 chrUextra 6543728 6544232 -22460424 + G6_DM LINE Jockey 576 1079 -963 8 634 26 30 0 0 chrUextra 6544584 6544617 -22460039 + AT_rich Low_complexity Low_complexity 1 33 0 8 634 1614 36 0 0 chrUextra 6544976 6545171 -22459485 - PROTOP DNA P 0 4480 4286 8 634 21 57 0 0 chrUextra 6545324 6545359 -22459297 + AT_rich Low_complexity Low_complexity 1 35 0 8 634 246 262 10 10 chrUextra 6545705 6545809 -22458847 - TV1I LTR Gypsy -818 5145 5042 8 634 1521 40 0 17 chrUextra 6546215 6547055 -22457601 + (CTATT)n Simple_repeat Simple_repeat 1 825 0 8 634 3295 202 11 21 chrUextra 6547155 6547996 -22456660 + SAR_DM Satellite Satellite 1 832 -227 8 634 1062 0 0 0 chrUextra 6548819 6548937 -22455719 + (TTCTC)n Simple_repeat Simple_repeat 4 121 0 8 634 2669 154 100 100 chrUextra 6549037 6549878 -22454778 - CIRCE LINE Composite -4138 2218 1378 8 634 1620 5 0 0 chrUextra 6550203 6550580 -22454076 + (CAAGA)n Simple_repeat Simple_repeat 1 377 0 8 634 1602 213 90 24 chrUextra 6550922 6551760 -22452896 + SAR_DM Satellite Satellite 1 893 -216 8 634 1876 63 4 4 chrUextra 6552801 6553054 -22451602 + ROOA_I LTR Pao 3064 3316 -3533 8 79 5002 5 0 0 chrUextra 6553052 6553642 -22451014 - FW_DM LINE Jockey -1 4691 4102 8 635 263 160 113 0 chrUextra 6553742 6553848 -22450808 + (TTATA)n Simple_repeat Simple_repeat 5 122 0 8 635 25 31 0 0 chrUextra 6554028 6554060 -22450596 + AT_rich Low_complexity Low_complexity 1 32 0 8 635 369 0 0 0 chrUextra 6555016 6555061 -22449595 + Copia2_LTR_DM LTR Copia 154 198 0 8 635 3816 11 0 7 chrUextra 6555061 6555524 -22449132 + Copia2_I LTR Copia 1 460 -3702 8 635 3243 178 19 22 chrUextra 6556579 6557406 -22447250 + SAR_DM Satellite Satellite 326 1150 -322 8 635 4250 32 0 26 chrUextra 6557801 6558347 -22446309 - Baggins1 LINE LOA 0 5453 4922 8 635 3183 187 18 27 chrUextra 6558448 6559268 -22445388 + SAR_DM Satellite Satellite 352 1164 -308 8 635 3290 22 2 2 chrUextra 6559389 6559796 -22444860 - NINJA_I LTR Pao -827 5184 4778 8 635 1373 27 176 0 chrUextra 6559804 6559992 -22444664 - NINJA_I LTR Pao -1498 4513 4293 8 635 426 55 0 0 chrUextra 6559999 6560054 -22444602 - NINJA_I LTR Pao -2279 3732 3678 8 635 25 31 0 0 chrUextra 6560097 6560129 -22444527 + AT_rich Low_complexity Low_complexity 1 32 0 8 635 6722 32 0 1 chrUextra 6560329 6561170 -22443486 - R1_DM LINE R1 -2215 3141 2302 8 635 6158 64 2 4 chrUextra 6561270 6562111 -22442545 + R1_DM LINE R1 4 843 -4513 8 635 1042 39 65 0 chrUextra 6562482 6562636 -22442020 - PROTOP DNA P -1246 3234 3071 8 635 2455 88 0 0 chrUextra 6562639 6562992 -22441664 - PROTOP DNA P -1512 2968 2616 8 635 220 141 46 15 chrUextra 6563596 6563661 -22440995 + (TTA)n Simple_repeat Simple_repeat 2 68 0 8 635 22 35 0 0 chrUextra 6563948 6563977 -22440679 + AT_rich Low_complexity Low_complexity 1 29 0 8 635 2739 225 14 11 chrUextra 6564108 6564934 -22439722 - SAR_DM Satellite Satellite -396 1076 248 8 635 3314 186 16 20 chrUextra 6565034 6565872 -22438784 + SAR_DM Satellite Satellite 348 1181 -291 8 635 4043 15 0 0 chrUextra 6565975 6566452 -22438204 + FW_DM LINE Jockey 3856 4332 -360 8 635 2942 30 0 0 chrUextra 6566452 6566816 -22437840 - G5_DM LINE Jockey -1710 3146 2783 8 635 320 238 0 10 chrUextra 6566916 6567018 -22437638 + XDMR_DM Unknown Unknown 260 360 0 8 635 3233 191 14 22 chrUextra 6566932 6567757 -22436899 - SAR_DM Satellite Satellite -353 1119 301 8 635 3523 171 24 21 chrUextra 6567857 6568695 -22435961 - SAR_DM Satellite Satellite -264 1208 369 8 635 416 55 0 0 chrUextra 6568798 6568853 -22435803 - DM1731_LTR LTR Copia -119 217 163 8 635 6148 16 29 1 chrUextra 6568870 6569639 -22435017 - G6_DM LINE Jockey 0 2042 1253 8 635 668 174 72 45 chrUextra 6569761 6569984 -22434672 - Gypsy12_LTR LTR Gypsy -778 1558 1330 8 635 4090 49 8 40 chrUextra 6569988 6570580 -22434076 + DIVER2_I LTR Pao 1429 2001 -2146 8 635 1234 0 0 0 chrUextra 6570680 6570822 -22433834 + Copia_I LTR Copia 4452 4593 0 8 635 2286 4 0 0 chrUextra 6570822 6571098 -22433558 + Copia_LTR LTR Copia 1 276 0 8 635 3560 2 0 0 chrUextra 6571098 6571521 -22433135 - Copia_I LTR Copia -2805 1788 1366 8 635 1416 29 0 0 chrUextra 6571621 6571865 -22432791 + (CTATT)n Simple_repeat Simple_repeat 1 244 0 8 635 1587 46 0 2 chrUextra 6571880 6572460 -22432196 + (CTATT)n Simple_repeat Simple_repeat 1 579 0 8 635 6871 16 4 0 chrUextra 6572562 6573402 -22431254 - STALKER4_I LTR Gypsy -3616 2914 2072 8 635 776 0 0 0 chrUextra 6573502 6573596 -22431060 - Copia_LTR LTR Copia -182 94 1 8 635 2377 4 0 0 chrUextra 6573596 6573873 -22430783 - Copia_I LTR Copia 0 4593 4317 8 635 3949 0 0 0 chrUextra 6573873 6574342 -22430314 - Copia_I LTR Copia -2805 1788 1320 8 635 6985 17 4 1 chrUextra 6574442 6575282 -22429374 - DMRT1A LINE R1 -2689 2494 1653 8 635 3522 179 18 12 chrUextra 6575383 6576214 -22428442 - SAR_DM Satellite Satellite -439 1033 198 8 635 1895 68 21 0 chrUextra 6576322 6576603 -22428053 - QUASIMODO_I LTR Gypsy -1525 4535 4249 8 635 2179 138 10 25 chrUextra 6576760 6577162 -22427494 - GTWIN_LTR LTR Gypsy -93 402 7 8 635 1225 198 30 6 chrUextra 6577282 6577612 -22427044 - SAR_DM Satellite Satellite -678 794 457 8 635 1413 110 100 152 chrUextra 6577621 6578102 -22426554 + FB4_DM DNA Tc1 173 628 -3461 8 635 4014 0 0 0 chrUextra 6578202 6578657 -22425999 - TABOR_LTR LTR Gypsy -51 455 1 8 635 1798 170 13 5 chrUextra 6578657 6579042 -22425614 - SAR_DM Satellite Satellite -651 821 434 8 635 6144 49 0 13 chrUextra 6579142 6579982 -22424674 - STALKER4_I LTR Gypsy -2665 3865 3037 8 635 3107 178 20 21 chrUextra 6580087 6580922 -22423734 + SAR_DM Satellite Satellite 1 833 -396 8 635 32 57 0 0 chrUextra 6581077 6581130 -22423526 + AT_rich Low_complexity Low_complexity 1 53 0 8 635 4396 58 2 3 chrUextra 6581290 6581862 -22422794 - BS2 LINE Jockey -678 4043 3473 8 635 3190 187 16 17 chrUextra 6581962 6582802 -22421854 + SAR_DM Satellite Satellite 1 838 -216 8 635 5810 85 32 11 chrUextra 6582902 6583742 -22420914 + Gypsy12_I LTR Gypsy 4677 5534 -12 8 635 6793 23 2 8 chrUextra 6583842 6584682 -22419974 + R1_DM LINE R1 4447 5281 -75 8 635 3286 190 14 24 chrUextra 6584787 6585621 -22419035 + SAR_DM Satellite Satellite 1 825 -216 8 635 6843 14 0 1 chrUextra 6585724 6586562 -22418094 + STALKER4_I LTR Gypsy 1249 2085 -4445 8 635 3361 184 12 11 chrUextra 6586662 6587468 -22417188 - SAR_DM Satellite Satellite -471 1001 195 8 635 782 102 0 0 chrUextra 6587375 6587502 -22417154 + ARS406_DM Unknown Unknown 1 127 -226 8 635 6964 5 11 6 chrUextra 6587602 6588442 -22416214 - G2_DM LINE Jockey -1371 1731 888 8 635 1780 5 5 0 chrUextra 6588544 6588754 -22415902 - DM1731_I LTR Copia -3765 211 1 8 635 2678 39 0 0 chrUextra 6588754 6589090 -22415566 - DM1731_LTR LTR Copia 0 336 1 8 635 2139 120 6 32 chrUextra 6589482 6590321 -22414335 + DMSAT6 Satellite Satellite 1 816 -96 8 635 4281 4 2 2 chrUextra 6590422 6590925 -22413731 + QUASIMODO_LTR LTR Gypsy 156 658 0 8 635 678 76 0 112 chrUextra 6590925 6591056 -22413600 + CIRCE LINE Composite 4369 4484 -1872 8 635 904 179 25 30 chrUextra 6591059 6591261 -22413395 - DM412 LTR Gypsy -566 6331 6131 8 635 4735 28 5 0 chrUextra 6592302 6592884 -22411772 + ACCORD2_I LTR Gypsy 500 1084 -6128 8 635 1989 12 4 4 chrUextra 6592884 6593129 -22411527 - MICROPIA_LTR LTR Gypsy 0 476 232 8 635 1480 211 3 0 chrUextra 6593242 6593565 -22411091 - G_DM LINE Jockey -3109 1237 914 8 635 1304 53 0 0 chrUextra 6593582 6593751 -22410905 + G2_DM LINE Jockey 2751 2919 -183 8 635 855 108 88 0 chrUextra 6593748 6593896 -22410760 - G2_DM LINE Jockey -415 2687 2527 8 635 1124 49 0 0 chrUextra 6593892 6594055 -22410601 + G2_DM LINE Jockey 2934 3096 -6 8 635 1570 62 87 45 chrUextra 6594182 6594346 -22410310 + MAX_I LTR Pao 126 278 -7636 8 635 249 33 0 0 chrUextra 6594346 6594376 -22410280 + (TA)n Simple_repeat Simple_repeat 2 31 0 8 635 1570 75 96 37 chrUextra 6594376 6594526 -22410130 + MAX_I LTR Pao 279 499 -7415 8 635 6121 63 13 4 chrUextra 6595122 6595962 -22408694 - R1_DM LINE R1 -4495 861 14 8 635 6980 1 17 0 chrUextra 6596062 6596902 -22407754 - STALKER4_I LTR Gypsy -392 6138 5285 8 635 2249 11 0 0 chrUextra 6597002 6597268 -22407388 - DM176_I LTR Gypsy -1858 4562 4297 8 635 4895 0 0 0 chrUextra 6597266 6597842 -22406814 - DM176_I LTR Gypsy -2741 3679 3104 8 635 3137 185 64 14 chrUextra 6597942 6598781 -22405875 + SAR_DM Satellite Satellite 384 1264 -208 8 635 294 24 24 0 chrUextra 6598887 6598928 -22405728 + BATUMI_I LTR Pao 7922 7963 0 8 635 1284 111 37 29 chrUextra 6598950 6599192 -22405464 + BATUMI_LTR LTR Pao 29 272 0 8 635 230 254 0 0 chrUextra 6599192 6599259 -22405397 - Copia_I LTR Copia -373 4220 4154 8 635 291 233 128 0 chrUextra 6599301 6599387 -22405269 - Copia_I LTR Copia -494 4099 4003 8 635 252 196 0 0 chrUextra 6599400 6599456 -22405200 - Copia_I LTR Copia -932 3661 3606 8 635 2052 4 0 0 chrUextra 6599468 6599722 -22404934 - DOC LINE Jockey 0 4725 4472 8 635 6885 27 2 0 chrUextra 6599822 6600662 -22403994 + R1_DM LINE R1 1318 2159 -3197 8 635 5820 44 154 6 chrUextra 6600763 6601602 -22403054 + R1_DM LINE R1 345 1308 -4048 8 635 815 11 0 0 chrUextra 6601702 6601797 -22402859 - NTS_DM Other Other -145 95 1 8 635 1428 20 20 20 chrUextra 6601797 6602000 -22402656 - NTS_DM Other Other 0 240 38 8 635 870 9 0 27 chrUextra 6602000 6602112 -22402544 - NTS_DM Other Other -107 133 25 8 635 21 57 0 0 chrUextra 6602138 6602173 -22402483 + AT_rich Low_complexity Low_complexity 1 35 0 8 635 1252 18 0 6 chrUextra 6602173 6602338 -22402318 - NTS_DM Other Other -39 201 38 8 635 870 9 0 27 chrUextra 6602338 6602450 -22402206 - NTS_DM Other Other -107 133 25 8 635 307 25 0 0 chrUextra 6602502 6602542 -22402114 - NTS_DM Other Other -39 201 162 8 635 997 95 0 0 chrUextra 6602642 6602800 -22401856 + ARS406_DM Unknown Unknown 1 158 -195 8 635 3025 181 6 6 chrUextra 6602807 6603481 -22401175 - SAR_DM Satellite Satellite -569 903 230 8 635 7117 1 0 0 chrUextra 6603582 6604421 -22400235 + ROVER-I_DM LTR Gypsy 3446 4284 -2300 8 635 3070 3 6 0 chrUextra 6604522 6604879 -22399777 + LSU-rRNA_Dme rRNA rRNA 2289 2647 -1253 8 635 4017 4 2 6 chrUextra 6604878 6605362 -22399294 + R1_DM LINE R1 3472 3953 -1403 8 635 2139 189 20 8 chrUextra 6605462 6606293 -22398363 - SAR_DM Satellite Satellite -690 840 1 8 635 266 262 12 0 chrUextra 6606218 6606302 -22398354 + XDMR_DM Unknown Unknown 6 90 -270 8 635 2619 67 8 3 chrUextra 6606405 6606767 -22397889 + Gypsy10_LTR LTR Gypsy 1 364 0 8 635 372 156 0 13 chrUextra 6606767 6606841 -22397815 + MDG1_LTR LTR Gypsy 344 416 -26 8 635 415 357 10 10 chrUextra 6606842 6607154 -22397502 + Gypsy10_I LTR Gypsy 1741 2266 -3012 8 635 25 65 0 0 chrUextra 6607981 6608027 -22396629 + AT_rich Low_complexity Low_complexity 1 46 0 8 635 3020 194 14 16 chrUextra 6608282 6609121 -22395535 - SAR_DM Satellite Satellite -553 837 1 8 635 3425 178 17 25 chrUextra 6609224 6610060 -22394596 - SAR_DM Satellite Satellite -216 1256 428 8 635 4128 9 6 0 chrUextra 6610160 6610685 -22393971 + ROVER-I_DM LTR Gypsy 6057 6584 0 8 635 2230 15 3 36 chrUextra 6610685 6610999 -22393657 + ROVER-LTR_DM LTR Gypsy 1 366 -1 8 635 2816 9 0 0 chrUextra 6611099 6611428 -22393228 - STALKER4_LTR LTR Gypsy -73 329 1 8 635 3646 18 61 0 chrUextra 6611428 6611938 -22392718 - STALKER4_I LTR Gypsy 0 6530 5990 8 635 2904 189 35 25 chrUextra 6612038 6612838 -22391818 + SAR_DM Satellite Satellite 269 1076 -396 8 635 24 0 0 0 chrUextra 6613211 6613235 -22391421 + AT_rich Low_complexity Low_complexity 1 24 0 8 635 1363 101 282 0 chrUextra 6613537 6613815 -22390841 - DMRT1B LINE R1 -340 4843 4487 8 635 2370 98 32 24 chrUextra 6613916 6614755 -22389901 - DMSAT6 Satellite Satellite -91 846 1 8 635 4601 2 0 0 chrUextra 6614855 6615382 -22389274 + LSU-rRNA_Dme rRNA rRNA 2055 2581 -1319 8 635 2731 0 0 0 chrUextra 6615384 6615694 -22388962 - R2_DM LINE R2 -938 2669 2360 8 635 5731 57 49 13 chrUextra 6615794 6616633 -22388023 + R1_DM LINE R1 148 1016 -4340 8 635 1095 215 152 70 chrUextra 6616739 6617572 -22387084 - Gypsy12_I LTR Gypsy -4612 934 34 8 635 6868 13 20 16 chrUextra 6618611 6619450 -22385206 - Gypsy6_I LTR Gypsy -1211 5801 4959 8 635 3021 0 0 0 chrUextra 6619550 6619895 -22384761 + R2_DM LINE R2 3263 3607 0 8 635 651 26 0 0 chrUextra 6619894 6619971 -22384685 + LSU-rRNA_Dme rRNA rRNA 2578 2654 -1246 8 635 3357 0 5 0 chrUextra 6620000 6620389 -22384267 + R1_DM LINE R1 1 391 -4965 8 635 1325 138 194 21 chrUextra 6620489 6620777 -22383879 + DMRT1B LINE R1 4828 5165 -18 8 635 30 27 0 0 chrUextra 6621428 6621465 -22383191 + AT_rich Low_complexity Low_complexity 1 37 0 8 635 3897 37 116 0 chrUextra 6621465 6622010 -22382646 - PROTOP_A DNA P -497 608 1 8 635 966 41 0 0 chrUextra 6622010 6622131 -22382525 - DMCR1A LINE CR1 -2825 1645 1525 8 635 690 31 10 0 chrUextra 6622126 6622222 -22382434 - PROTOP_A DNA P -641 464 368 8 635 237 33 0 0 chrUextra 6622237 6622267 -22382389 + (TCTCC)n Simple_repeat Simple_repeat 1 30 0 8 635 1110 146 129 47 chrUextra 6622495 6622796 -22381860 - DNAREP1_DM LINE Penelope -201 393 83 8 635 489 33 0 0 chrUextra 6622885 6622946 -22381710 - DNAREP1_DM LINE Penelope -532 62 2 8 635 338 180 70 28 chrUextra 6624281 6624424 -22380232 + (AGATG)n Simple_repeat Simple_repeat 3 151 0 8 635 580 6 0 139 chrUextra 6624434 6624853 -22379803 + (GA)n Simple_repeat Simple_repeat 1 360 0 8 635 298 62 0 138 chrUextra 6624896 6625084 -22379572 + GA-rich Low_complexity Low_complexity 1 162 0 8 635 441 0 0 0 chrUextra 6625974 6626023 -22378633 + (TTGTG)n Simple_repeat Simple_repeat 1 49 0 8 635 2824 6 0 0 chrUextra 6626123 6626448 -22378208 + DIVER_I LTR Pao 5319 5643 0 8 635 1927 5 0 0 chrUextra 6626448 6626672 -22377984 + DIVER_LTR LTR Pao 1 224 0 8 635 404 39 0 0 chrUextra 6626692 6626743 -22377913 - CIRCE LINE Composite -4878 1478 1428 8 635 641 92 20 10 chrUextra 6626743 6626842 -22377814 + STALKER4_LTR LTR Gypsy 280 379 -23 8 635 3531 170 17 14 chrUextra 6627062 6627892 -22376764 - SAR_DM Satellite Satellite -446 1026 195 8 635 1308 21 21 21 chrUextra 6628001 6628193 -22376463 - NTS_DM Other Other -11 229 38 8 635 817 0 0 0 chrUextra 6628193 6628289 -22376367 - NTS_DM Other Other -107 133 38 8 635 832 9 9 27 chrUextra 6628289 6628400 -22376256 - NTS_DM Other Other -107 133 25 8 635 21 57 0 0 chrUextra 6628426 6628461 -22376195 + AT_rich Low_complexity Low_complexity 1 35 0 8 635 1234 24 0 6 chrUextra 6628461 6628626 -22376030 - NTS_DM Other Other -39 201 38 8 635 870 9 0 27 chrUextra 6628626 6628738 -22375918 - NTS_DM Other Other -107 133 25 8 635 22 56 0 0 chrUextra 6628764 6628800 -22375856 + AT_rich Low_complexity Low_complexity 1 36 0 8 635 3325 0 0 0 chrUextra 6628940 6629317 -22375339 - ROO_LTR LTR Pao -51 377 1 8 635 2655 85 11 10 chrUextra 6629879 6630712 -22373944 + DMSAT6 Satellite Satellite 1 833 -40 8 635 3496 168 26 9 chrUextra 6630849 6631654 -22373002 - SAR_DM Satellite Satellite -361 1111 293 8 635 2709 0 0 0 chrUextra 6631757 6632074 -22372582 - ACCORD_LTR LTR Gypsy -241 317 1 8 635 3959 45 13 9 chrUextra 6632074 6632596 -22372060 - R1_DM LINE R1 -2231 3125 2602 8 635 7034 7 34 0 chrUextra 6632699 6633535 -22371121 + DOC2_DM LINE Jockey 3569 4432 -361 8 635 2505 170 13 8 chrUextra 6634574 6635413 -22369243 + SAR_DM Satellite Satellite 1 843 -536 8 635 22 0 0 0 chrUextra 6635708 6635730 -22368926 + AT_rich Low_complexity Low_complexity 1 22 0 8 635 3209 170 35 23 chrUextra 6636455 6637267 -22367389 + SAR_DM Satellite Satellite 293 1113 -359 8 635 318 188 9 47 chrUextra 6637185 6637291 -22367365 - XDMR_DM Unknown Unknown 0 360 259 8 635 2741 0 0 0 chrUextra 6637391 6637702 -22366954 - HOBO DNA hAT -2705 311 1 8 635 36 53 0 0 chrUextra 6637876 6637933 -22366723 + AT_rich Low_complexity Low_complexity 1 57 0 8 635 2153 0 0 0 chrUextra 6637974 6638220 -22366436 - HOBO DNA hAT 0 3016 2771 8 635 1972 130 21 9 chrUextra 6638330 6638663 -22365993 - HETA LINE telomeric -3184 2897 2561 8 635 1376 236 11 8 chrUextra 6638660 6639019 -22365637 - TAHRE LINE telomeric -9261 1202 843 8 635 377 204 7 53 chrUextra 6639019 6639169 -22365487 - TAHRE LINE telomeric -10034 429 287 8 635 907 9 0 0 chrUextra 6639269 6639381 -22365275 + DM1731_I LTR Copia 3865 3976 0 8 635 2700 30 0 3 chrUextra 6639381 6639718 -22364938 + DM1731_LTR LTR Copia 1 336 0 8 635 525 284 77 40 chrUextra 6639722 6640100 -22364556 - Copia_I LTR Copia -401 4192 3801 8 635 317 197 0 0 chrUextra 6640208 6640279 -22364377 - STALKER4_I LTR Gypsy -6225 305 235 8 635 31 58 0 0 chrUextra 6640280 6640332 -22364324 + AT_rich Low_complexity Low_complexity 1 52 0 8 635 3153 55 1 14 chrUextra 6640420 6640859 -22363797 - STALKER4_LTR LTR Gypsy -3 399 1 8 635 611 0 0 0 chrUextra 6640859 6640932 -22363724 - STALKER4_I LTR Gypsy 0 6530 6458 8 635 575 200 0 0 chrUextra 6640928 6641043 -22363613 + G_DM LINE Jockey 1069 1183 -3163 8 635 3257 187 17 23 chrUextra 6642083 6642921 -22361735 - SAR_DM Satellite Satellite -262 1210 378 8 635 3596 25 83 1 chrUextra 6643021 6643859 -22360797 - R1_DM LINE R1 -1250 4106 3200 8 635 1743 73 3 28 chrUextra 6643959 6644228 -22360428 + STALKER4_LTR LTR Gypsy 144 392 -10 8 635 1803 52 40 4 chrUextra 6644369 6644620 -22360036 - DMTOM1_LTR LTR Gypsy -150 260 1 8 635 397 242 38 44 chrUextra 6644618 6644778 -22359878 - DM176_I LTR Gypsy 0 6420 6262 8 635 3091 195 18 19 chrUextra 6644897 6645735 -22358921 + SAR_DM Satellite Satellite 1 836 -208 8 635 7061 14 0 0 chrUextra 6645835 6646673 -22357983 - IDEFIX_I LTR Gypsy -3601 2027 1190 8 635 3590 214 21 19 chrUextra 6646773 6648548 -22356108 - SAR_DM Satellite Satellite -514 1778 1 8 635 850 9 0 0 chrUextra 6648649 6648754 -22355902 + PROTOP DNA P 257 361 -4119 8 635 1732 104 16 60 chrUextra 6648805 6649121 -22355535 - Gypsy6A_LTR LTR Gypsy -118 302 1 8 635 2491 28 47 8 chrUextra 6649121 6649485 -22355171 + PROTOP DNA P 359 736 -3744 8 635 538 148 3 30 chrUextra 6649587 6649770 -22354886 + XDMR Unknown Unknown 111 361 0 8 635 3098 189 15 24 chrUextra 6649622 6650425 -22354231 - SAR_DM Satellite Satellite -259 1213 418 8 635 6220 54 1 0 chrUextra 6650525 6651363 -22353293 + IDEFIX_I LTR Gypsy 3496 4334 -1294 8 635 2781 43 89 0 chrUextra 6651497 6651892 -22352764 + PROTOP_A DNA P 84 513 -592 8 635 28 71 0 0 chrUextra 6652031 6652087 -22352569 + AT_rich Low_complexity Low_complexity 1 56 0 8 635 29 47 0 0 chrUextra 6652131 6652174 -22352482 + AT_rich Low_complexity Low_complexity 1 43 0 8 635 28 71 0 0 chrUextra 6652212 6652268 -22352388 + AT_rich Low_complexity Low_complexity 1 56 0 8 635 6864 17 0 7 chrUextra 6652401 6653239 -22351417 - FW_DM LINE Jockey -2258 2434 1603 8 635 256 244 216 9 chrUextra 6653409 6653525 -22351131 + DIVER2_I LTR Pao 3190 3329 -818 8 635 241 143 0 0 chrUextra 6653732 6653773 -22350883 - G5A_DM LINE Jockey -853 1988 1948 8 635 2360 57 3 0 chrUextra 6653773 6654088 -22350568 - PROTOP DNA P 0 4480 4165 8 635 274 88 275 0 chrUextra 6654097 6654177 -22350479 - PROTOP DNA P -3732 748 646 8 635 2259 33 3 16 chrUextra 6654277 6654584 -22350072 + IDEFIX_LTR LTR Gypsy 292 594 0 8 635 22 0 0 0 chrUextra 6654696 6654718 -22349938 + AT_rich Low_complexity Low_complexity 1 22 0 8 635 27 29 0 0 chrUextra 6654774 6654808 -22349848 + AT_rich Low_complexity Low_complexity 1 34 0 8 635 415 0 0 19 chrUextra 6655057 6655109 -22349547 + IDEFIX_I LTR Gypsy 1 51 -5577 8 635 6774 31 1 0 chrUextra 6655215 6656053 -22348603 + DIVER_I LTR Pao 3546 4384 -1259 8 635 6533 43 1 4 chrUextra 6656153 6656991 -22347665 - BATUMI_I LTR Pao -2637 5326 4491 8 635 6368 41 2 9 chrUextra 6657091 6657929 -22346727 + BATUMI_I LTR Pao 3035 3866 -4097 8 635 875 127 23 57 chrUextra 6660479 6660655 -22344001 + ACCORD2_LTR LTR Gypsy 46 215 0 8 635 366 94 0 159 chrUextra 6660655 6660743 -22343913 + ACCORD2_I LTR Gypsy 1 74 -7138 8 635 6646 16 1 0 chrUextra 6660843 6661681 -22342975 + QUASIMODO_I LTR Gypsy 4443 5281 -779 8 635 755 161 0 43 chrUextra 6662368 6662556 -22342100 + CT-rich Low_complexity Low_complexity 1 180 0 8 635 255 170 0 0 chrUextra 6662572 6662619 -22342037 + CT-rich Low_complexity Low_complexity 2 48 0 8 635 4555 16 27 0 chrUextra 6662719 6663281 -22341375 - IVK_DM LINE I -4825 577 1 8 635 475 247 17 29 chrUextra 6663282 6663457 -22341199 - QUASIMODO_I LTR Gypsy -361 5699 5527 8 635 831 19 65 0 chrUextra 6663449 6663557 -22341099 + PROTOP_A DNA P 176 290 -815 8 635 1597 33 5 5 chrUextra 6663657 6663854 -22340802 + QUASIMODO_I LTR Gypsy 1613 1809 -4251 8 635 2297 0 0 0 chrUextra 6663854 6664130 -22340526 - Copia_LTR LTR Copia 0 276 1 8 635 3133 0 0 3 chrUextra 6664130 6664495 -22340161 - Copia_I LTR Copia 0 4593 4230 8 635 1626 198 68 41 chrUextra 6664603 6665119 -22339537 + Gypsy12_LTR LTR Gypsy 957 1486 -850 8 635 670 154 8 0 chrUextra 6665120 6665237 -22339419 + Gypsy12_LTR LTR Gypsy 2145 2262 -18 8 635 491 249 143 21 chrUextra 6665244 6665433 -22339223 + TAHRE LINE telomeric 9807 10018 -445 8 635 3399 184 8 14 chrUextra 6665533 6666371 -22338285 + SAR_DM Satellite Satellite 1 832 -411 8 635 6181 38 32 5 chrUextra 6666471 6667309 -22337347 - HETA LINE telomeric -2284 3797 2937 8 635 7123 9 4 0 chrUextra 6667409 6668247 -22336409 + R1_DM LINE R1 1916 2756 -2600 8 635 7033 18 0 0 chrUextra 6668347 6669185 -22335471 + FW_DM LINE Jockey 3638 4475 -217 8 635 1296 189 62 44 chrUextra 6669285 6669673 -22334983 - STALKER4_I LTR Gypsy -5251 1279 885 8 635 593 91 20 10 chrUextra 6670022 6670122 -22334534 - STALKER4_I LTR Gypsy -5645 885 785 8 635 4747 57 13 82 chrUextra 6670227 6671052 -22333604 - BATUMI_I LTR Pao -6561 1402 635 8 635 867 20 0 0 chrUextra 6671895 6671996 -22332660 + (TTCTC)n Simple_repeat Simple_repeat 5 105 0 8 635 6544 29 47 0 chrUextra 6672096 6672933 -22331723 - FW_DM LINE Jockey -3450 1242 367 8 635 3096 200 12 22 chrUextra 6673038 6673870 -22330786 - SAR_DM Satellite Satellite -227 1245 422 8 635 3029 37 3 0 chrUextra 6673970 6674352 -22330304 + R1_DM LINE R1 4684 5066 -290 8 635 954 26 0 0 chrUextra 6674349 6674463 -22330193 + R1_DM LINE R1 5243 5356 0 8 635 2208 65 6 6 chrUextra 6674496 6674807 -22329849 + R1_DM LINE R1 1 311 -5045 8 635 2892 43 10 12 chrUextra 6674907 6675308 -22329348 - BATUMI_I LTR Pao -1093 6870 6471 8 635 2382 68 116 0 chrUextra 6675303 6675744 -22328912 + BATUMI_I LTR Pao 7344 7835 -128 8 635 1452 35 5 5 chrUextra 6675844 6676046 -22328610 + ROO_I LTR Pao 945 1146 -7110 8 635 3285 180 22 21 chrUextra 6676784 6677606 -22327050 + SAR_DM Satellite Satellite 369 1191 -281 8 635 272 56 0 0 chrUextra 6677582 6677618 -22327038 - ARS406_DM Unknown Unknown -164 189 154 8 635 2420 35 79 0 chrUextra 6678237 6678555 -22326101 + DMCR1A LINE CR1 1082 1424 -3046 8 635 4561 13 7 8 chrUextra 6678655 6679266 -22325390 + STALKER4_I LTR Gypsy 5921 6530 0 8 635 1957 0 0 0 chrUextra 6679266 6679492 -22325164 + STALKER4_LTR LTR Gypsy 1 226 -176 8 635 274 30 0 0 chrUextra 6679594 6679627 -22325029 - DMRT1B LINE R1 -5150 33 1 8 635 4682 31 2 0 chrUextra 6679844 6680429 -22324227 + R1_DM LINE R1 2559 3144 -2212 8 635 2602 207 26 61 chrUextra 6680532 6681364 -22323292 + TART_B1 LINE telomeric 905 1707 -8947 8 635 1306 256 82 16 chrUextra 6681740 6682303 -22322353 + QUASIMODO_I LTR Gypsy 4367 4966 -1094 8 635 3115 184 16 16 chrUextra 6682403 6683240 -22321416 - SAR_DM Satellite Satellite -556 837 1 8 79 3388 170 24 20 chrUextra 6684285 6685114 -22319542 - SAR_DM Satellite Satellite -300 1172 341 8 636 3322 178 28 21 chrUextra 6685215 6686051 -22318605 - SAR_DM Satellite Satellite -365 1107 267 8 636 307 27 0 0 chrUextra 6686151 6686188 -22318468 - NTS_DM Other Other -203 37 1 8 636 1674 21 16 25 chrUextra 6686188 6686430 -22318226 - NTS_DM Other Other 0 240 1 8 636 1378 20 20 25 chrUextra 6686430 6686634 -22318022 - NTS_DM Other Other 0 240 38 8 636 817 0 0 0 chrUextra 6686634 6686730 -22317926 - NTS_DM Other Other -107 133 38 8 636 832 9 9 27 chrUextra 6686730 6686841 -22317815 - NTS_DM Other Other -107 133 25 8 636 21 57 0 0 chrUextra 6686867 6686902 -22317754 + AT_rich Low_complexity Low_complexity 1 35 0 8 636 547 35 0 12 chrUextra 6686902 6686988 -22317668 - NTS_DM Other Other -39 201 117 8 636 4381 104 105 5 chrUextra 6687155 6687925 -22316731 - TART LINE telomeric -6799 7678 6832 8 636 2751 124 128 26 chrUextra 6688025 6688862 -22315794 - TART LINE telomeric -4395 10082 9435 8 636 6306 4 24 20 chrUextra 6688962 6689799 -22314857 + MAX_I LTR Pao 581 1420 -6494 8 636 1457 0 0 0 chrUextra 6689899 6690065 -22314591 + LSU-rRNA_Dme rRNA rRNA 2416 2581 -1319 8 636 5808 1 0 0 chrUextra 6690063 6690736 -22313920 + R2_DM LINE R2 510 1182 -2425 8 636 213 296 0 20 chrUextra 6691388 6691488 -22313168 + T-rich Low_complexity Low_complexity 3 100 0 8 636 880 80 7 22 chrUextra 6691773 6692610 -22312046 + RSP Satellite Satellite 1 824 0 8 636 2979 26 0 0 chrUextra 6692710 6693090 -22311566 - IDEFIX_I LTR Gypsy -1715 3913 3534 8 636 1585 16 0 0 chrUextra 6693088 6693275 -22311381 - DIVER2_LTR LTR Pao -198 187 1 8 636 2111 15 4 11 chrUextra 6693275 6693547 -22311109 - DIVER2_I LTR Pao 0 4147 3878 8 636 3497 0 43 2 chrUextra 6693647 6694064 -22310592 - DOC LINE Jockey -4288 437 4 8 636 2004 161 10 10 chrUextra 6694068 6694483 -22310173 + SAR_DM Satellite Satellite 630 1044 -428 8 636 29 0 0 0 chrUextra 6694672 6694701 -22309955 + AT_rich Low_complexity Low_complexity 1 29 0 8 636 975 109 0 0 chrUextra 6694703 6695120 -22309536 + (TTA)n Simple_repeat Simple_repeat 1 417 0 8 636 29 0 0 0 chrUextra 6695253 6695282 -22309374 + AT_rich Low_complexity Low_complexity 1 29 0 8 636 762 103 0 0 chrUextra 6695284 6695420 -22309236 + (TTA)n Simple_repeat Simple_repeat 3 138 0 8 636 6806 13 7 0 chrUextra 6695521 6696358 -22308298 + STALKER4_I LTR Gypsy 2449 3291 -3239 8 636 5783 39 77 19 chrUextra 6696459 6697295 -22307361 - BATUMI_I LTR Pao -4258 3705 2822 8 636 3028 14 0 0 chrUextra 6697395 6697756 -22306900 + PROTOP DNA P 4120 4480 0 8 636 2201 213 2 2 chrUextra 6697756 6698232 -22306424 - ROVER-I_DM LTR Gypsy -3720 2864 2389 8 636 6713 18 31 0 chrUextra 6698332 6699169 -22305487 + DOC2_DM LINE Jockey 1473 2335 -2458 8 636 2948 50 86 0 chrUextra 6699269 6699687 -22304969 + PROTOP_A DNA P 652 1105 0 8 636 26 30 0 0 chrUextra 6700064 6700097 -22304559 + AT_rich Low_complexity Low_complexity 1 33 0 8 636 5077 35 32 3 chrUextra 6700205 6700789 -22303867 - DMRT1B LINE R1 -4437 746 163 8 636 180 0 0 0 chrUextra 6700789 6700809 -22303847 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 8 636 5077 35 32 3 chrUextra 6700809 6700887 -22303769 - DMRT1B LINE R1 -5021 162 66 8 636 986 117 7 0 chrUextra 6700887 6701041 -22303615 - DMRT1C LINE R1 -4788 655 501 8 636 7174 0 1 4 chrUextra 6701141 6701977 -22302679 + SSU-rRNA_Dme rRNA rRNA 676 1509 -486 8 636 252 250 0 0 chrUextra 6702161 6702221 -22302435 + TV1I LTR Gypsy 5903 5962 -1 8 636 929 72 0 0 chrUextra 6703013 6703151 -22301505 - ARS406_DM Unknown Unknown -215 138 1 8 636 3190 183 9 13 chrUextra 6703058 6703849 -22300807 + SAR_DM Satellite Satellite 195 982 -490 8 636 6316 49 4 4 chrUextra 6704885 6705721 -22298935 + IDEFIX_I LTR Gypsy 2349 3184 -2444 8 636 1197 65 0 0 chrUextra 6706145 6706375 -22298281 + (TTCTCC)n Simple_repeat Simple_repeat 1 230 0 8 636 1205 74 0 0 chrUextra 6706757 6706933 -22297723 - ARS406_DM Unknown Unknown -177 176 1 8 636 2631 169 9 14 chrUextra 6706933 6707592 -22297064 + SAR_DM Satellite Satellite 1 830 -416 8 636 2772 0 0 0 chrUextra 6707693 6708008 -22296648 + LSU-rRNA_Dme rRNA rRNA 2340 2654 -1246 8 636 4198 6 4 0 chrUextra 6708038 6708529 -22296127 + R1_DM LINE R1 1 493 -4863 8 636 3828 30 2 0 chrUextra 6708990 6709465 -22295191 + PROTOP DNA P 1 476 -4004 8 636 2072 293 13 23 chrUextra 6709566 6710390 -22294266 - FROGGER_I LTR Copia -691 1386 571 8 636 4281 91 75 45 chrUextra 6710546 6711331 -22293325 + Gypsy12_I LTR Gypsy 1 809 -4737 8 636 6639 24 41 0 chrUextra 6711437 6712273 -22292383 - R1_DM LINE R1 -1751 3605 2736 8 636 2274 222 54 53 chrUextra 6712373 6713209 -22291447 + Gypsy12_LTR LTR Gypsy 627 1463 -873 8 636 3198 185 32 16 chrUextra 6713309 6714145 -22290511 + SAR_DM Satellite Satellite 1 848 -208 8 636 7346 0 0 0 chrUextra 6714245 6715081 -22289575 + MAX_I LTR Pao 3816 4651 -3263 8 636 4195 17 85 2 chrUextra 6715181 6715722 -22288934 - ROO_I LTR Pao -2518 5738 5153 8 636 2324 10 3 0 chrUextra 6715725 6716017 -22288639 - ROO_I LTR Pao -3323 4933 4641 8 636 3732 158 12 17 chrUextra 6716133 6716953 -22287703 + SAR_DM Satellite Satellite 191 1006 -466 8 636 3044 26 38 13 chrUextra 6717495 6717889 -22286767 + PROTOP_A DNA P 1 404 -701 8 636 1467 5 5 0 chrUextra 6717989 6718173 -22286483 + ROO_I LTR Pao 8072 8256 0 8 636 3766 0 0 0 chrUextra 6718173 6718601 -22286055 + ROO_LTR LTR Pao 1 428 0 8 636 4341 98 5 1 chrUextra 6719085 6719759 -22284897 + S_DM DNA Tc1 1 676 -1060 8 636 2449 50 9 0 chrUextra 6719861 6720184 -22284472 - TART LINE telomeric -12107 2370 2045 8 636 3665 61 78 0 chrUextra 6720175 6720697 -22283959 - TART LINE telomeric -12618 1859 1297 8 636 605 234 7 109 chrUextra 6720820 6721094 -22283562 - ROVER-LTR_DM LTR Gypsy -121 246 1 8 636 2452 162 28 8 chrUextra 6721094 6721629 -22283027 - ROVER-I_DM LTR Gypsy 0 6584 6039 8 636 334 252 22 37 chrUextra 6721737 6721873 -22282783 - QUASIMODO_I LTR Gypsy -400 5660 5527 8 636 2201 66 33 3 chrUextra 6721865 6722198 -22282458 + PROTOP_B DNA P 176 518 -635 8 636 917 39 394 0 chrUextra 6722174 6722402 -22282254 + PROTOP DNA P 541 859 -3621 8 636 1105 69 19 0 chrUextra 6722410 6722569 -22282087 - Jockey2 LINE Jockey -1608 1820 1659 8 636 1888 252 34 32 chrUextra 6722673 6723268 -22281388 - TOM_I LTR Gypsy -5100 1012 417 8 636 324 273 116 83 chrUextra 6723812 6724088 -22280568 - Invader1_LTR LTR Gypsy -55 368 84 8 636 658 157 148 14 chrUextra 6724297 6724439 -22280217 + DMLTR5 LTR Gypsy 44 204 -62 8 636 4253 62 16 96 chrUextra 6724542 6725377 -22279279 + BATUMI_I LTR Pao 86 853 -7110 8 636 501 340 91 14 chrUextra 6725487 6726003 -22278653 - BLASTOPIA_I LTR Gypsy -1301 3180 2625 8 636 6893 12 36 0 chrUextra 6726413 6727249 -22277407 - STALKER4_I LTR Gypsy -1845 4685 3820 8 636 4328 79 50 111 chrUextra 6727349 6728185 -22276471 - HETA LINE telomeric -4557 1524 740 8 636 946 22 0 7 chrUextra 6728285 6728420 -22276236 + NTS_DM Other Other 68 201 -39 8 636 21 57 0 0 chrUextra 6728420 6728455 -22276201 + AT_rich Low_complexity Low_complexity 1 35 0 8 636 832 9 9 27 chrUextra 6728481 6728592 -22276064 + NTS_DM Other Other 25 133 -107 8 636 817 0 0 0 chrUextra 6728592 6728688 -22275968 + NTS_DM Other Other 38 133 -107 8 636 1387 25 20 20 chrUextra 6728688 6728891 -22275765 + NTS_DM Other Other 38 240 0 8 636 1647 22 17 17 chrUextra 6728891 6729121 -22275535 + NTS_DM Other Other 1 230 -10 8 636 6208 41 52 1 chrUextra 6729225 6730057 -22274599 - R1_DM LINE R1 -3581 1775 902 8 636 5872 58 0 5 chrUextra 6730157 6730992 -22273664 + IDEFIX_I LTR Gypsy 4626 5456 -172 8 636 3833 38 28 4 chrUextra 6731092 6731592 -22273064 - DMCR1A LINE CR1 -3701 769 258 8 636 770 38 0 9 chrUextra 6731597 6731704 -22272952 - DMCR1A LINE CR1 -4364 106 1 8 636 291 232 0 0 chrUextra 6732281 6732350 -22272306 - BS2 LINE Jockey -507 4214 4146 8 636 22 0 0 0 chrUextra 6732625 6732647 -22272009 + AT_rich Low_complexity Low_complexity 1 22 0 8 636 3182 109 88 46 chrUextra 6732962 6733597 -22271059 - Gypsy12_I LTR Gypsy -4662 884 223 8 636 875 281 47 33 chrUextra 6733898 6734686 -22269970 - STALKER4_I LTR Gypsy -3098 3432 2634 8 636 236 273 0 0 chrUextra 6734834 6734900 -22269756 + Gypsy4_I LTR Gypsy 1067 1132 -5156 8 636 994 124 80 16 chrUextra 6734932 6735120 -22269536 + DMCR1A LINE CR1 454 653 -3817 8 636 509 327 60 46 chrUextra 6735128 6735647 -22269009 + Gypsy4_I LTR Gypsy 1220 1745 -4543 8 636 2410 18 0 0 chrUextra 6735767 6736053 -22268603 - Invader4_I LTR Gypsy -2127 286 1 8 636 3003 6 0 0 chrUextra 6736053 6736399 -22268257 - Invader4_LTR LTR Gypsy 0 346 1 8 636 40 0 0 0 chrUextra 6736399 6736439 -22268217 + AT_rich Low_complexity Low_complexity 1 40 0 8 636 551 0 124 12 chrUextra 6736439 6736600 -22268056 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 636 4676 0 0 54 chrUextra 6736702 6737328 -22267328 + MDG3_I LTR Gypsy 4395 4986 0 8 636 1785 5 0 0 chrUextra 6737328 6737537 -22267119 + MDG3_LTR LTR Gypsy 1 209 -58 8 636 1422 0 0 6 chrUextra 6737637 6737805 -22266851 + STALKER4_LTR LTR Gypsy 236 402 0 8 636 4350 83 1 19 chrUextra 6737805 6738472 -22266184 + STALKER4_I LTR Gypsy 1 655 -5875 8 636 6904 22 5 0 chrUextra 6738572 6739407 -22265249 - R1_DM LINE R1 -689 4667 3829 8 636 509 126 70 12 chrUextra 6740442 6740584 -22264072 - TAHRE LINE telomeric -3988 10489 10370 8 636 684 245 117 16 chrUextra 6740584 6740841 -22263815 - TAHRE LINE telomeric -374 10089 9807 8 636 2299 110 40 54 chrUextra 6740853 6741277 -22263379 - Gypsy12_LTR LTR Gypsy -23 2313 1896 8 636 3165 6 0 0 chrUextra 6741377 6741739 -22262917 - R2_DM LINE R2 -192 3415 3054 8 636 4050 4 0 0 chrUextra 6741743 6742212 -22262444 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2113 8 636 3701 199 8 26 chrUextra 6742312 6743143 -22261513 + TAHRE LINE telomeric 394 1209 -9254 8 636 3986 2 0 0 chrUextra 6743629 6744082 -22260574 + HOBO DNA hAT 1 453 -2563 8 636 7077 2 1 0 chrUextra 6744182 6745017 -22259639 + MDG3_I LTR Gypsy 2383 3218 -1768 8 636 3492 227 14 23 chrUextra 6745117 6746885 -22257771 + SAR_DM Satellite Satellite 1 1753 -365 8 636 4176 35 3 56 chrUextra 6746987 6747592 -22257064 + MAX_I LTR Pao 6876 7448 -466 8 636 1778 48 0 0 chrUextra 6747594 6747822 -22256834 + MAX_I LTR Pao 7646 7873 -41 8 636 3286 0 0 0 chrUextra 6747922 6748299 -22256357 - FW_DM LINE Jockey -4315 377 1 8 636 1005 68 166 0 chrUextra 6748467 6748757 -22255899 - PROTOP DNA P -1279 3201 2864 8 636 3295 174 36 25 chrUextra 6748857 6749688 -22254968 + SAR_DM Satellite Satellite 378 1217 -255 8 636 3650 18 0 0 chrUextra 6749792 6750233 -22254423 + PROTOP DNA P 4040 4480 0 8 636 2055 103 172 0 chrUextra 6750233 6750626 -22254030 - TART_B1 LINE telomeric -9022 1632 1172 8 636 3197 191 14 24 chrUextra 6750727 6751554 -22253102 + SAR_DM Satellite Satellite 438 1256 -216 8 636 3567 177 8 18 chrUextra 6751663 6752493 -22252163 - SAR_DM Satellite Satellite -369 1103 282 8 636 3455 11 109 4 chrUextra 6752597 6753432 -22251224 - DOC LINE Jockey -664 4061 3139 8 636 3196 187 14 19 chrUextra 6753532 6754367 -22250289 + SAR_DM Satellite Satellite 1 830 -208 8 636 940 179 31 14 chrUextra 6754469 6755302 -22249354 - SAR_DM Satellite Satellite -808 846 1 8 636 3206 69 9 0 chrUextra 6755402 6755838 -22248818 + BS3_DM LINE Jockey 605 1044 -746 8 636 1721 76 0 0 chrUextra 6755828 6756064 -22248592 + BS3_DM LINE Jockey 1311 1546 -244 8 636 1039 85 6 6 chrUextra 6756072 6756237 -22248419 + DM297_I LTR Gypsy 2179 2343 -3824 8 636 571 0 0 0 chrUextra 6756337 6756402 -22248254 - MAX_I LTR Pao -7849 65 1 8 636 2691 12 3 0 chrUextra 6756402 6756722 -22247934 - MAX_LTR LTR Pao 0 321 1 8 636 27 0 0 0 chrUextra 6756722 6756749 -22247907 + AT_rich Low_complexity Low_complexity 1 27 0 8 636 3558 2 0 0 chrUextra 6756749 6757172 -22247484 - MAX_I LTR Pao -482 7432 7010 8 636 3840 13 0 0 chrUextra 6757272 6757725 -22246931 - DOC LINE Jockey -4241 484 32 8 636 3005 8 3 0 chrUextra 6757756 6758107 -22246549 - DOC2_DM LINE Jockey -2176 2617 2266 8 636 6906 20 1 0 chrUextra 6758207 6759042 -22245614 - R1_DM LINE R1 -3119 2237 1402 8 636 2051 4 4 0 chrUextra 6760077 6760323 -22244333 + Gypsy6_I LTR Gypsy 1960 2206 -4806 8 636 5088 8 0 0 chrUextra 6760322 6760912 -22243744 + Gypsy6_I LTR Gypsy 2418 3007 -4005 8 636 1910 184 51 20 chrUextra 6761012 6761501 -22243155 - Stalker2_I LTR Gypsy -6608 794 291 8 636 28 48 0 0 chrUextra 6761508 6761550 -22243106 + AT_rich Low_complexity Low_complexity 1 42 0 8 636 1770 62 0 12 chrUextra 6761602 6761847 -22242809 - STALKER4_LTR LTR Gypsy -3 399 158 8 636 4205 19 0 2 chrUextra 6761947 6762467 -22242189 + DOC LINE Jockey 4207 4725 0 8 636 570 98 69 0 chrUextra 6762471 6762573 -22242083 - ROVER-LTR_DM LTR Gypsy -258 109 1 8 636 298 0 0 0 chrUextra 6762889 6762925 -22241731 + MAX_I LTR Pao 920 955 -6959 8 636 1850 118 37 233 chrUextra 6762964 6763716 -22240940 + MAX_I LTR Pao 938 1542 -6372 8 636 1255 22 21 21 chrUextra 6763816 6764004 -22240652 + NTS_DM Other Other 53 240 0 8 636 1756 17 17 17 chrUextra 6764004 6764244 -22240412 + NTS_DM Other Other 1 240 0 8 636 1756 17 17 17 chrUextra 6764244 6764484 -22240172 + NTS_DM Other Other 1 240 0 8 636 1251 30 0 6 chrUextra 6764484 6764650 -22240006 + NTS_DM Other Other 1 165 -75 8 636 555 310 78 38 chrUextra 6764750 6765580 -22239076 - HMSBEAGLE_I LTR Gypsy -1234 5295 4433 8 636 6715 36 0 0 chrUextra 6765684 6766518 -22238138 + MAX_I LTR Pao 5104 5937 -1977 8 636 6956 7 29 0 chrUextra 6766618 6767452 -22237204 + DMRT1B LINE R1 2018 2875 -2308 8 636 4028 65 29 2 chrUextra 6768486 6769320 -22235336 + PROTOP DNA P 157 880 -225 8 636 3235 190 14 22 chrUextra 6769421 6770251 -22234405 + SAR_DM Satellite Satellite 425 1248 -224 8 636 6126 29 71 2 chrUextra 6770354 6771180 -22233476 + ROOA_I LTR Pao 5658 6540 -309 8 636 267 164 0 18 chrUextra 6771291 6771347 -22233309 - NINJA_LTR LTR Pao -147 170 116 8 636 237 160 0 20 chrUextra 6771403 6771454 -22233202 - Gypsy8_LTR LTR Gypsy -254 50 1 8 636 212 0 0 35 chrUextra 6772292 6772321 -22232335 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 636 6512 23 0 1 chrUextra 6773156 6773949 -22230707 + Invader3_I LTR Gypsy 3261 4052 -836 8 636 453 0 0 0 chrUextra 6773936 6773989 -22230667 + Invader3_I LTR Gypsy 4827 4879 -9 8 636 4099 2 6 4 chrUextra 6774090 6774580 -22230076 + LSU-rRNA_Dme rRNA rRNA 1298 1788 -2112 8 636 1120 0 0 0 chrUextra 6774624 6774751 -22229905 + LSU-rRNA_Dme rRNA rRNA 1788 1914 -1986 8 636 1477 6 0 0 chrUextra 6774751 6774924 -22229732 + TRANSPAC_LTR LTR Gypsy 1 173 -157 8 636 4572 41 14 2 chrUextra 6775026 6775663 -22228993 + MDG1_I LTR Gypsy 5650 6294 -302 8 636 25 0 0 0 chrUextra 6775684 6775709 -22228947 + AT_rich Low_complexity Low_complexity 1 25 0 8 636 746 61 18 26 chrUextra 6775731 6775857 -22228799 + BATUMI_LTR LTR Pao 32 138 -134 8 636 3011 181 56 6 chrUextra 6775963 6776792 -22227864 - SAR_DM Satellite Satellite -682 870 1 8 636 1394 30 64 0 chrUextra 6776976 6777179 -22227477 - TLD2 Unknown Unknown -2 216 1 8 636 566 330 42 14 chrUextra 6777119 6777571 -22227085 - Gypsy6_I LTR Gypsy -3774 3238 2920 8 636 2734 210 25 54 chrUextra 6777826 6778660 -22225996 + TAHRE LINE telomeric 7042 7851 -2612 8 636 21 89 0 0 chrUextra 6778859 6778915 -22225741 + AT_rich Low_complexity Low_complexity 1 56 0 8 636 23 78 0 0 chrUextra 6778953 6779004 -22225652 + AT_rich Low_complexity Low_complexity 1 51 0 8 636 33 0 0 0 chrUextra 6779050 6779083 -22225573 + AT_rich Low_complexity Low_complexity 1 33 0 8 636 1094 45 8 0 chrUextra 6779460 6779594 -22225062 - PROTOP DNA P 0 4480 4346 8 636 40 67 0 0 chrUextra 6780346 6780421 -22224235 + AT_rich Low_complexity Low_complexity 1 75 0 8 636 1931 4 0 4 chrUextra 6780628 6780854 -22223802 - ACCORD2_I LTR Gypsy -1132 6080 5856 8 636 5286 13 0 2 chrUextra 6780852 6781462 -22223194 - ACCORD2_I LTR Gypsy -769 6443 5835 8 636 227 0 0 0 chrUextra 6781562 6781587 -22223069 - IDEFIX_I LTR Gypsy -5603 25 1 8 636 25 0 0 0 chrUextra 6781880 6781905 -22222751 + AT_rich Low_complexity Low_complexity 1 25 0 8 636 2365 27 7 3 chrUextra 6782097 6782396 -22222260 - IDEFIX_LTR LTR Gypsy 0 594 295 8 636 1488 19 0 0 chrUextra 6782496 6782709 -22221947 + (TTA)n Simple_repeat Simple_repeat 1 213 0 8 636 1560 135 39 36 chrUextra 6782730 6782957 -22221699 + Jockey2 LINE Jockey 3089 3318 -110 8 636 1176 28 0 0 chrUextra 6782957 6783101 -22221555 + (TTA)n Simple_repeat Simple_repeat 3 146 0 8 636 1560 135 39 36 chrUextra 6783101 6783204 -22221452 + Jockey2 LINE Jockey 3319 3420 -8 8 636 365 124 433 0 chrUextra 6783233 6783330 -22221326 - DNAREP1_DM LINE Penelope -175 419 281 8 636 7112 14 0 2 chrUextra 6783430 6784264 -22220392 + MDG3_I LTR Gypsy 2524 3355 -1631 8 636 24 32 0 0 chrUextra 6784695 6784726 -22219930 + AT_rich Low_complexity Low_complexity 1 31 0 8 636 324 0 0 0 chrUextra 6784875 6784911 -22219745 + (T)n Simple_repeat Simple_repeat 1 36 0 8 636 5846 53 23 42 chrUextra 6785298 6786132 -22218524 + HETA LINE telomeric 3458 4275 -1806 8 636 2240 133 24 37 chrUextra 6786232 6787066 -22217590 + DMSAT6 Satellite Satellite 1 822 -40 8 636 378 281 104 29 chrUextra 6787649 6787994 -22216662 - QUASIMODO_I LTR Gypsy 0 6060 5690 8 636 5278 22 0 15 chrUextra 6788100 6788751 -22215905 + CIRCE LINE Composite 4340 4980 -1376 8 636 3418 177 46 25 chrUextra 6789035 6789868 -22214788 + SAR_DM Satellite Satellite 332 1181 -291 8 636 3177 169 11 8 chrUextra 6789968 6790800 -22213856 + SAR_DM Satellite Satellite 1 833 -399 8 636 4616 38 106 40 chrUextra 6791054 6791735 -22212921 - TRANSIB2 DNA Transib -624 2220 1495 8 636 6916 18 34 0 chrUextra 6791836 6792670 -22211986 + STALKER4_I LTR Gypsy 2032 2893 -3637 8 636 4110 35 27 2 chrUextra 6792770 6793282 -22211374 + FW_DM LINE Jockey 4167 4691 -1 8 636 268 29 0 0 chrUextra 6793291 6793325 -22211331 - R1_DM LINE R1 -3966 1390 1357 8 636 2321 29 4 4 chrUextra 6793325 6793604 -22211052 - R1_DM LINE R1 -4150 1206 928 8 636 7077 31 0 1 chrUextra 6793704 6794538 -22210118 - R1_DM LINE R1 -1955 3401 2569 8 636 3466 188 22 20 chrUextra 6794642 6795472 -22209184 - SAR_DM Satellite Satellite -242 1230 400 8 636 47 0 0 0 chrUextra 6796087 6796134 -22208522 + AT_rich Low_complexity Low_complexity 1 47 0 8 636 6120 1 1 0 chrUextra 6796506 6797178 -22207478 - LSU-rRNA_Dme rRNA rRNA -588 3312 2640 8 636 1437 12 6 0 chrUextra 6797176 6797339 -22207317 - R1_DM LINE R1 0 5356 5193 8 636 3378 185 23 24 chrUextra 6797442 6798272 -22206384 - SAR_DM Satellite Satellite -242 1230 402 8 636 3190 159 45 8 chrUextra 6798374 6798421 -22206235 + SAR_DM Satellite Satellite 1 59 -1660 8 636 1089 88 0 0 chrUextra 6798421 6798580 -22206076 - ARS406_DM Unknown Unknown -164 189 31 8 636 3190 159 45 8 chrUextra 6798580 6799205 -22205451 + SAR_DM Satellite Satellite 60 861 -858 8 636 7498 7 2 0 chrUextra 6799305 6800137 -22204519 - LSU-rRNA_Dme rRNA rRNA -422 3478 2645 8 636 3547 186 16 19 chrUextra 6800240 6801070 -22203586 - SAR_DM Satellite Satellite -359 1113 287 8 636 5236 14 44 0 chrUextra 6801171 6802004 -22202652 + FW_DM LINE Jockey 3032 3901 -791 8 636 2703 184 10 6 chrUextra 6802104 6802936 -22201720 - SAR_DM Satellite Satellite -710 835 1 8 636 1757 84 2 2 chrUextra 6803970 6804228 -22200428 - TART LINE telomeric -9562 4915 4698 8 636 1729 20 0 0 chrUextra 6804237 6804432 -22200224 - TART LINE telomeric -9789 4688 4494 8 636 379 19 0 19 chrUextra 6804428 6804481 -22200175 - TAHRE LINE telomeric -6 10457 10406 8 636 2150 77 16 9 chrUextra 6804482 6804798 -22199858 - TART LINE telomeric -3820 10657 10340 8 636 333 271 123 91 chrUextra 6805175 6805451 -22199205 - Invader1_LTR LTR Gypsy -55 368 84 8 636 434 150 0 24 chrUextra 6805654 6805736 -22198920 + DMLTR5 LTR Gypsy 44 123 -143 8 636 1362 47 0 0 chrUextra 6806499 6806669 -22197987 + (CCTTG)n Simple_repeat Simple_repeat 2 171 0 8 636 3293 3 0 0 chrUextra 6806769 6807155 -22197501 - ROO_I LTR Pao -7088 1168 783 8 636 4034 7 0 0 chrUextra 6807155 6807602 -22197054 - NOMAD_LTR LTR Gypsy 0 518 72 8 636 5760 67 17 3 chrUextra 6807702 6808461 -22196195 - R1_DM LINE R1 -4585 771 2 8 636 313 26 0 0 chrUextra 6808497 6808535 -22196121 - R1_DM LINE R1 0 5356 5319 8 636 992 170 37 82 chrUextra 6808635 6808879 -22195777 + TART LINE telomeric 3130 3362 -11115 8 636 2173 168 27 70 chrUextra 6808874 6809466 -22195190 + TART LINE telomeric 3683 4029 -10448 8 636 3466 188 8 17 chrUextra 6809583 6810386 -22194270 + SAR_DM Satellite Satellite 326 1120 -352 8 636 363 200 10 20 chrUextra 6810299 6810401 -22194255 - XDMR_DM Unknown Unknown 0 360 260 8 636 320 125 0 0 chrUextra 6810501 6810557 -22194099 + ARS406_DM Unknown Unknown 66 121 -232 8 636 3831 227 29 16 chrUextra 6810545 6812253 -22192403 - SAR_DM Satellite Satellite -545 1729 1 8 636 315 111 19 0 chrUextra 6812213 6812267 -22192389 + ARS406_DM Unknown Unknown 1 55 -298 8 636 5266 100 7 1 chrUextra 6812367 6813200 -22191456 - BATUMI_I LTR Pao -3298 4616 3704 8 636 1271 143 3 168 chrUextra 6813323 6813633 -22191023 - HOBO DNA hAT -2743 273 15 8 636 1229 53 0 0 chrUextra 6813982 6814133 -22190523 - NINJA_I LTR Pao -4371 1640 1490 8 636 3919 36 63 11 chrUextra 6814234 6814774 -22189882 - BATUMI_I LTR Pao -7395 568 1 8 636 1462 28 121 45 chrUextra 6814774 6814998 -22189658 - BATUMI_LTR LTR Pao 0 272 32 8 636 865 98 0 0 chrUextra 6815166 6815298 -22189358 - ARS406_DM Unknown Unknown -221 132 1 8 79 3427 178 31 14 chrUextra 6815202 6815999 -22188657 + SAR_DM Satellite Satellite 192 1002 -470 8 637 7041 14 1 0 chrUextra 6817032 6817865 -22186791 - QUASIMODO_I LTR Gypsy -4595 1465 632 8 637 702 186 14 14 chrUextra 6818044 6818191 -22186465 - HETRP_DM Satellite Satellite -197 1675 1529 8 637 702 186 14 14 chrUextra 6818349 6818496 -22186160 - HETRP_DM Satellite Satellite -197 1675 1529 8 637 494 224 16 16 chrUextra 6818624 6818751 -22185905 - HETRP_DM Satellite Satellite -197 1675 1549 8 637 192 40 0 0 chrUextra 6818751 6818776 -22185880 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 637 1912 178 1 13 chrUextra 6818901 6819314 -22185342 - STALKER4_I LTR Gypsy -6705 697 235 8 637 22 0 0 0 chrUextra 6819341 6819363 -22185293 + AT_rich Low_complexity Low_complexity 1 22 0 8 637 2003 45 8 0 chrUextra 6819489 6819731 -22184925 - STALKER4_LTR LTR Gypsy -23 379 136 8 637 7088 8 0 1 chrUextra 6819831 6820664 -22183992 - Invader2_I LTR Gypsy -240 4352 3521 8 637 3260 243 35 16 chrUextra 6820765 6822520 -22182136 - SAR_DM Satellite Satellite -555 1788 1 8 637 2906 3 3 0 chrUextra 6822630 6822959 -22181697 + IVK_DM LINE I 5073 5402 0 8 637 760 285 28 30 chrUextra 6822964 6823463 -22181193 - STALKER4_I LTR Gypsy -3093 3437 2940 8 637 3698 274 37 22 chrUextra 6823571 6825316 -22179340 - SAR_DM Satellite Satellite -203 1770 1 8 637 479 107 0 0 chrUextra 6825254 6825329 -22179327 + ARS406_DM Unknown Unknown 1 75 -278 8 637 7382 11 4 0 chrUextra 6825429 6826262 -22178394 - Gypsy4_I LTR Gypsy -3210 3078 2243 8 637 23 0 0 0 chrUextra 6826432 6826455 -22178201 + AT_rich Low_complexity Low_complexity 1 23 0 8 637 1380 318 11 11 chrUextra 6826570 6827191 -22177465 + ROVER-I_DM LTR Gypsy 1057 1677 -4907 8 637 3007 226 29 13 chrUextra 6827302 6828128 -22176528 + SAR_DM Satellite Satellite 1 839 -203 8 637 1094 209 4 4 chrUextra 6828235 6828475 -22176181 - Stalker2_I LTR Gypsy -6872 530 291 8 637 1918 146 10 3 chrUextra 6828483 6828869 -22175787 - STALKER4_I LTR Gypsy -6790 612 233 8 637 225 116 0 44 chrUextra 6829016 6829061 -22175595 - STALKER4_I LTR Gypsy -7350 52 10 8 637 3137 11 0 0 chrUextra 6829161 6829517 -22175139 - R1_DM LINE R1 -1006 4350 3995 8 637 4185 8 2 2 chrUextra 6829514 6829994 -22174662 - R1_DM LINE R1 -1475 3881 3402 8 637 2209 0 0 4 chrUextra 6830094 6830348 -22174308 + FW_DM LINE Jockey 4437 4689 -3 8 637 5267 9 0 0 chrUextra 6830347 6830927 -22173729 - GTWIN_I LTR Gypsy -1292 5129 4550 8 637 632 36 12 0 chrUextra 6831027 6831110 -22173546 + ARS406_DM Unknown Unknown 104 187 -166 8 637 3566 269 29 37 chrUextra 6831049 6832788 -22171868 - SAR_DM Satellite Satellite -242 1725 1 8 637 7448 6 2 0 chrUextra 6832893 6833725 -22170931 + DOC2_DM LINE Jockey 1958 2791 -2002 8 637 6817 19 12 6 chrUextra 6833825 6834657 -22169999 - BATUMI_I LTR Pao -1649 6314 5478 8 637 3460 180 8 13 chrUextra 6834762 6835589 -22169067 - SAR_DM Satellite Satellite -396 1076 254 8 637 3532 174 16 11 chrUextra 6835689 6836509 -22168147 - SAR_DM Satellite Satellite -454 1018 195 8 637 602 133 0 0 chrUextra 6836416 6836521 -22168135 + ARS406_DM Unknown Unknown 1 105 -248 8 637 967 24 0 86 chrUextra 6836621 6836760 -22167896 - ROO_I LTR Pao -8129 127 1 8 637 3307 17 49 0 chrUextra 6836760 6837168 -22167488 - ROO_LTR LTR Pao 0 428 1 8 637 3303 182 26 10 chrUextra 6838510 6839316 -22165340 + SAR_DM Satellite Satellite 226 1044 -428 8 637 4924 16 0 0 chrUextra 6839417 6840027 -22164629 - PROTOP DNA P -106 4374 3765 8 637 855 0 0 0 chrUextra 6840028 6840131 -22164525 - PROTOP DNA P -2422 2058 1956 8 637 556 34 152 0 chrUextra 6840131 6840249 -22164407 - PROTOP DNA P -3779 701 566 8 637 3384 137 76 46 chrUextra 6840349 6841181 -22163475 + PROTOP_A DNA P 228 1084 -21 8 637 1851 4 4 4 chrUextra 6841281 6841516 -22163140 - Stalker2_I LTR Gypsy -3480 3922 3688 8 637 5038 0 5 0 chrUextra 6841513 6842113 -22162543 - Stalker2_I LTR Gypsy -4013 3389 2787 8 637 4846 47 62 0 chrUextra 6842213 6842885 -22161771 - R1_DM LINE R1 -1945 3411 2698 8 637 952 55 52 71 chrUextra 6842890 6843045 -22161611 - R2_DM LINE R2 -1537 2070 1919 8 637 1791 70 0 0 chrUextra 6843145 6843401 -22161255 - IDEFIX_I LTR Gypsy -1544 4084 3829 8 637 1617 46 0 0 chrUextra 6843758 6843975 -22160681 - IDEFIX_I LTR Gypsy -1793 3835 3619 8 637 1402 101 0 39 chrUextra 6844077 6844335 -22160321 - HETA LINE telomeric -5795 286 39 8 637 632 180 0 18 chrUextra 6844304 6844468 -22160188 - HETA LINE telomeric -5725 356 196 8 637 2234 157 14 11 chrUextra 6844463 6844908 -22159748 - TAHRE LINE telomeric -3 10460 10015 8 637 4216 56 16 113 chrUextra 6845009 6845841 -22158815 + BATUMI_I LTR Pao 30 780 -7183 8 637 6820 20 4 1 chrUextra 6845941 6846773 -22157883 + R1_DM LINE R1 3170 4003 -1353 8 637 3190 0 3 3 chrUextra 6847808 6848183 -22156473 + STALKER4_LTR LTR Gypsy 28 402 0 8 637 1521 71 14 0 chrUextra 6848213 6848424 -22156232 + Gypsy6A_LTR LTR Gypsy 207 420 0 8 637 6890 23 0 10 chrUextra 6848737 6849569 -22155087 - Gypsy12_I LTR Gypsy -504 5042 4219 8 637 6954 23 0 1 chrUextra 6849669 6850501 -22154155 + MAX_I LTR Pao 3156 3986 -3928 8 637 3150 69 0 2 chrUextra 6850601 6851054 -22153602 - BATUMI_I LTR Pao -209 7754 7303 8 637 2595 54 8 6 chrUextra 6851077 6851433 -22153223 + BATUMI_I LTR Pao 6427 6783 -1180 8 637 3319 181 18 24 chrUextra 6851538 6852365 -22152291 - SAR_DM Satellite Satellite -242 1230 409 8 637 444 221 0 9 chrUextra 6852465 6852579 -22152077 + XDMR_DM Unknown Unknown 248 360 0 8 637 3197 182 15 20 chrUextra 6852494 6853291 -22151365 - SAR_DM Satellite Satellite -354 1118 326 8 637 1428 84 6 3 chrUextra 6853401 6853758 -22150898 + (AATAG)n Simple_repeat Simple_repeat 1 357 0 8 637 1239 91 5 20 chrUextra 6853806 6854224 -22150432 + (AATAG)n Simple_repeat Simple_repeat 1 411 0 8 637 7307 0 0 0 chrUextra 6854329 6855161 -22149495 + MAX_I LTR Pao 3154 3985 -3929 8 637 2416 92 31 44 chrUextra 6855261 6856074 -22148582 + DMSAT6 Satellite Satellite 1 801 -6 8 637 4625 24 0 0 chrUextra 6856193 6856767 -22147889 + FW_DM LINE Jockey 4119 4692 0 8 637 1055 52 0 0 chrUextra 6856771 6856905 -22147751 - R1_DM LINE R1 -3966 1390 1257 8 637 628 81 0 83 chrUextra 6856904 6857025 -22147631 - R1_DM LINE R1 -4675 681 571 8 637 2316 106 30 12 chrUextra 6857130 6857955 -22146701 - DMSAT6 Satellite Satellite 0 840 1 8 637 3503 178 13 18 chrUextra 6858064 6858889 -22145767 + SAR_DM Satellite Satellite 332 1152 -320 8 637 2218 4 0 0 chrUextra 6858989 6859250 -22145406 - Copia_I LTR Copia -4332 261 1 8 637 2297 0 0 0 chrUextra 6859250 6859526 -22145130 - Copia_LTR LTR Copia 0 276 1 8 637 30 27 0 0 chrUextra 6859687 6859724 -22144932 + AT_rich Low_complexity Low_complexity 1 37 0 8 637 2734 124 74 0 chrUextra 6859921 6860752 -22143904 - TART_B1 LINE telomeric -8784 1870 983 8 637 3371 175 8 11 chrUextra 6860855 6861612 -22143044 - SAR_DM Satellite Satellite -425 1047 293 8 637 280 86 121 0 chrUextra 6861627 6861685 -22142971 + ARS406_DM Unknown Unknown 53 117 -236 8 637 1881 5 5 0 chrUextra 6861785 6862008 -22142648 - STALKER4_LTR LTR Gypsy -178 224 1 8 637 4535 13 5 7 chrUextra 6862008 6862617 -22142039 - STALKER4_I LTR Gypsy 0 6530 5923 8 637 7058 10 2 0 chrUextra 6862717 6863549 -22141107 + Gypsy6_I LTR Gypsy 466 1299 -5713 8 637 469 232 0 72 chrUextra 6863727 6863894 -22140762 - TOM_I LTR Gypsy -4630 1482 1328 8 637 1380 240 2 55 chrUextra 6864062 6864481 -22140175 - TOM_I LTR Gypsy -5089 1023 627 8 637 21 0 0 0 chrUextra 6864581 6864602 -22140054 + AT_rich Low_complexity Low_complexity 1 21 0 8 637 3300 44 49 0 chrUextra 6864961 6865413 -22139243 - PROTOP_A DNA P 0 1105 632 8 637 799 248 20 7 chrUextra 6866446 6866751 -22137905 + CT-rich Low_complexity Low_complexity 1 308 0 8 637 201 302 0 0 chrUextra 6866759 6866802 -22137854 + polypyrimidine Low_complexity Low_complexity 4 46 0 8 637 824 192 32 0 chrUextra 6866805 6866992 -22137664 - Gypsy5_I LTR Gypsy -1953 4556 4364 8 637 1100 207 22 11 chrUextra 6867002 6867275 -22137381 - Gypsy5_I LTR Gypsy -2612 3897 3622 8 637 2459 208 50 29 chrUextra 6867375 6868199 -22136457 + SAR_DM Satellite Satellite 1 841 -203 8 637 6895 19 0 1 chrUextra 6868306 6869137 -22135519 - DMRT1A LINE R1 -2519 2664 1835 8 637 777 0 0 0 chrUextra 6869237 6869326 -22135330 - Gypsy2_LTR LTR Gypsy -264 89 1 8 637 6483 0 0 0 chrUextra 6869326 6870068 -22134588 - Gypsy2_I LTR Gypsy 0 6135 5394 8 637 3284 183 14 24 chrUextra 6870170 6870999 -22133657 + SAR_DM Satellite Satellite 195 1015 -457 8 637 4313 101 167 4 chrUextra 6871101 6871930 -22132726 - TART LINE telomeric -6799 7678 6783 8 637 1824 45 62 0 chrUextra 6872030 6872273 -22132383 + TART_B1 LINE telomeric 3363 3620 -7034 8 637 4571 29 7 5 chrUextra 6872273 6872861 -22131795 + PROTOP_A DNA P 1 589 -516 8 637 3894 57 2 6 chrUextra 6872961 6873486 -22131170 + R1_DM LINE R1 89 611 -4745 8 637 1248 55 0 0 chrUextra 6873488 6873651 -22131005 + R1_DM LINE R1 1157 1319 -4037 8 637 4291 21 0 2 chrUextra 6873892 6874414 -22130242 + DIVER2_I LTR Pao 3627 4147 0 8 637 2417 39 3 7 chrUextra 6874414 6874723 -22129933 + DIVER2_LTR LTR Pao 1 308 -77 8 637 411 288 40 39 chrUextra 6874995 6875038 -22129618 + DM297_I LTR Gypsy 2576 2667 -3500 8 637 1544 9 24 0 chrUextra 6875038 6875251 -22129405 + TLD2 Unknown Unknown 1 218 0 8 637 411 288 40 39 chrUextra 6875251 6875398 -22129258 + DM297_I LTR Gypsy 2668 2991 -3176 8 637 300 342 19 0 chrUextra 6875473 6875634 -22129022 + Gypsy7_I LTR Gypsy 2933 3096 -1888 8 637 285 0 0 75 chrUextra 6875754 6875794 -22128862 - NTS_DM Other Other -179 61 25 8 637 22 56 0 0 chrUextra 6875820 6875856 -22128800 + AT_rich Low_complexity Low_complexity 1 36 0 8 637 255 125 0 0 chrUextra 6875869 6875909 -22128747 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 246 150 0 0 chrUextra 6875952 6875992 -22128664 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 246 150 0 0 chrUextra 6876044 6876084 -22128572 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 24 53 0 0 chrUextra 6876089 6876127 -22128529 + AT_rich Low_complexity Low_complexity 1 38 0 8 637 246 150 0 0 chrUextra 6876136 6876176 -22128480 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 27 29 0 0 chrUextra 6876181 6876215 -22128441 + AT_rich Low_complexity Low_complexity 1 34 0 8 637 246 150 0 0 chrUextra 6876326 6876366 -22128290 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 246 150 0 0 chrUextra 6876418 6876458 -22128198 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 27 29 0 0 chrUextra 6876463 6876497 -22128159 + AT_rich Low_complexity Low_complexity 1 34 0 8 637 21 0 0 0 chrUextra 6877230 6877251 -22127405 + AT_rich Low_complexity Low_complexity 1 21 0 8 637 5158 43 4 18 chrUextra 6877616 6878357 -22126299 - STALKER4_I LTR Gypsy -4790 1740 818 8 637 1796 176 3 3 chrUextra 6878547 6879117 -22125539 + SAR_DM Satellite Satellite 1 570 -545 8 637 685 124 0 0 chrUextra 6879105 6879226 -22125430 - ARS406_DM Unknown Unknown -232 121 1 8 637 3173 241 19 35 chrUextra 6879130 6880309 -22124347 + SAR_DM Satellite Satellite 1 1160 -208 8 637 704 26 34 34 chrUextra 6881340 6881459 -22123197 + NTS_DM Other Other 122 240 0 8 637 1651 38 17 17 chrUextra 6881459 6881699 -22122957 + NTS_DM Other Other 1 240 0 8 637 1672 34 17 17 chrUextra 6881699 6881938 -22122718 + NTS_DM Other Other 1 239 -1 8 637 1471 66 17 17 chrUextra 6881939 6882171 -22122485 + NTS_DM Other Other 1 232 -8 8 637 3130 179 50 11 chrUextra 6882275 6883076 -22121580 + SAR_DM Satellite Satellite 245 1076 -396 8 637 1915 33 25 0 chrUextra 6883203 6883448 -22121208 + DMCR1A LINE CR1 4220 4470 0 8 637 516 225 62 85 chrUextra 6883455 6883742 -22120914 - Gypsy8_LTR LTR Gypsy -5 299 1 8 637 1991 36 46 4 chrUextra 6883752 6884033 -22120623 + DMCR1A LINE CR1 4105 4397 -73 8 637 2006 249 57 9 chrUextra 6885102 6885766 -22118890 - Gypsy4_I LTR Gypsy -3565 2723 2028 8 637 473 304 62 43 chrUextra 6885995 6886799 -22117857 + DM176_I LTR Gypsy 1442 2263 -4321 8 637 6771 24 7 0 chrUextra 6886926 6887757 -22116899 - R1_DM LINE R1 -145 5211 4375 8 637 269 231 105 65 chrUextra 6887973 6888126 -22116530 + MDG1_I LTR Gypsy 1304 1462 -5134 8 637 912 214 109 17 chrUextra 6888240 6888618 -22116038 + MDG1_I LTR Gypsy 1661 2144 -4452 8 637 238 170 19 0 chrUextra 6888618 6888671 -22115985 + DMLTR5 LTR Gypsy 1 54 -212 8 637 3380 183 17 19 chrUextra 6888788 6889619 -22115037 - SAR_DM Satellite Satellite -259 1213 385 8 637 5093 2 2 2 chrUextra 6889719 6890305 -22114351 - R2_DM LINE R2 -1724 1883 1298 8 637 2026 20 0 4 chrUextra 6890303 6890550 -22114106 - R2_DM LINE R2 -2029 1578 1333 8 637 693 103 241 0 chrUextra 6890938 6891083 -22113573 + FB4_DM DNA Tc1 3 182 -3907 8 637 250 33 0 0 chrUextra 6891091 6891121 -22113535 - Baggins1 LINE LOA -697 4756 4727 8 637 3086 194 18 20 chrUextra 6891581 6892412 -22112244 - SAR_DM Satellite Satellite -264 1208 380 8 637 1092 139 64 5 chrUextra 6892949 6893152 -22111504 + DNAREP1_DM LINE Penelope 22 236 -358 8 637 212 0 0 35 chrUextra 6893182 6893211 -22111445 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 637 3418 168 11 15 chrUextra 6893444 6894246 -22110410 + SAR_DM Satellite Satellite 278 1076 -396 8 637 259 78 19 56 chrUextra 6894220 6894274 -22110382 - XDMR_DM Unknown Unknown -9 351 300 8 637 6465 34 25 0 chrUextra 6894374 6895205 -22109451 - MDG1_I LTR Gypsy -3411 3185 2334 8 637 5966 24 6 48 chrUextra 6895305 6896136 -22108520 + BATUMI_I LTR Pao 1900 2695 -5268 8 637 2566 205 45 52 chrUextra 6896236 6897066 -22107590 - TAHRE LINE telomeric -2550 7913 7090 8 637 2096 59 78 35 chrUextra 6897167 6897533 -22107123 + DM176_LTR LTR Gypsy 113 480 -27 8 637 3399 26 26 11 chrUextra 6897533 6897998 -22106658 + DM176_I LTR Gypsy 1 472 -5948 8 637 4754 94 73 37 chrUextra 6898098 6898929 -22105727 - Gypsy12_I LTR Gypsy -4321 1225 365 8 637 3658 33 2 2 chrUextra 6899029 6899489 -22105167 - CIRCE LINE Composite -364 5992 5533 8 637 614 326 51 46 chrUextra 6899961 6900489 -22104167 - Gypsy4_I LTR Gypsy -2913 3508 2674 8 637 1467 28 24 0 chrUextra 6900489 6900702 -22103954 - TLD2 Unknown Unknown 0 218 1 8 637 614 326 51 46 chrUextra 6900702 6900791 -22103865 - Gypsy4_I LTR Gypsy -2913 2673 2530 8 637 3225 186 22 20 chrUextra 6900893 6901721 -22102935 + SAR_DM Satellite Satellite 282 1110 -362 8 637 6491 10 51 13 chrUextra 6901821 6902643 -22102013 + DOC LINE Jockey 252 1104 -3621 8 637 3293 3 0 0 chrUextra 6903681 6904071 -22100585 - QUASIMODO_LTR LTR Gypsy -268 390 1 8 637 2804 31 3 0 chrUextra 6904151 6904511 -22100145 - NINJA_I LTR Pao -1656 4355 3995 8 637 2706 24 0 0 chrUextra 6904630 6904961 -22099695 - R1_DM LINE R1 -2162 3194 2864 8 637 241 32 0 0 chrUextra 6904961 6904992 -22099664 + CIRCE LINE Composite 4950 4980 -1376 8 637 608 42 10 31 chrUextra 6905344 6905441 -22099215 + CIRCE LINE Composite 4981 5075 -1281 8 637 4559 13 0 0 chrUextra 6907401 6907941 -22096715 - STALKER4_I LTR Gypsy -2342 4188 3649 8 637 551 0 134 3 chrUextra 6907941 6908231 -22096425 + (TA)n Simple_repeat Simple_repeat 1 328 0 8 637 3385 154 132 10 chrUextra 6908331 6909157 -22095499 - TART LINE telomeric -4600 9877 8951 8 637 248 133 22 0 chrUextra 6909360 6909405 -22095251 - DM176_LTR LTR Gypsy -238 269 224 8 637 1036 95 3 35 chrUextra 6909511 6909703 -22094953 + STALKER4_LTR LTR Gypsy 248 399 -3 8 637 301 45 14 69 chrUextra 6909786 6909858 -22094798 + (TAAA)n Simple_repeat Simple_repeat 1 68 0 8 637 965 205 4 4 chrUextra 6909866 6910091 -22094565 + Stalker2_I LTR Gypsy 291 515 -6887 8 637 6673 20 0 1 chrUextra 6910191 6911019 -22093637 - ROO_I LTR Pao -3232 5024 4198 8 637 1172 179 84 25 chrUextra 6911304 6911624 -22093032 - Gypsy12_LTR LTR Gypsy -840 1496 1158 8 637 345 230 31 98 chrUextra 6911636 6911829 -22092827 - Gypsy12_LTR LTR Gypsy -1258 1078 899 8 637 572 11 0 137 chrUextra 6912054 6912259 -22092397 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 8 637 304 181 66 0 chrUextra 6913471 6913637 -22091019 + T-rich Low_complexity Low_complexity 1 177 0 8 637 599 140 46 12 chrUextra 6913630 6913803 -22090853 + CT-rich Low_complexity Low_complexity 1 179 0 8 637 3467 181 8 12 chrUextra 6913911 6914741 -22089915 - SAR_DM Satellite Satellite -445 1027 201 8 637 3001 3 0 3 chrUextra 6914841 6915189 -22089467 - DMRT1B LINE R1 -4836 347 1 8 637 2192 19 0 0 chrUextra 6915406 6915671 -22088985 + R1_DM LINE R1 2559 2823 -2533 8 637 6798 5 23 0 chrUextra 6915771 6916601 -22088055 + DM297_I LTR Gypsy 4619 5467 -700 8 637 3320 179 14 16 chrUextra 6916713 6917508 -22087148 + SAR_DM Satellite Satellite 326 1118 -354 8 637 380 189 9 19 chrUextra 6917422 6917530 -22087126 - XDMR_DM Unknown Unknown 0 360 254 8 637 2406 264 27 19 chrUextra 6917636 6918461 -22086195 - G6_DM LINE Jockey -567 1475 645 8 637 5305 69 1 51 chrUextra 6918561 6919391 -22085265 + HETA LINE telomeric 590 1378 -4703 8 637 6352 40 24 4 chrUextra 6919491 6920321 -22084335 - TART LINE telomeric -3845 10632 9786 8 637 5344 14 0 11 chrUextra 6920421 6921251 -22083405 + DM412 LTR Gypsy 1 657 -6240 8 637 3478 183 7 17 chrUextra 6921351 6922181 -22082475 - SAR_DM Satellite Satellite -354 1118 297 8 637 3772 97 66 31 chrUextra 6922281 6923111 -22081545 + STALKER4_I LTR Gypsy 419 1338 -5192 8 637 351 49 65 16 chrUextra 6923660 6923722 -22080934 - HMSBEAGLE_I LTR Gypsy -6464 65 1 8 637 922 168 102 15 chrUextra 6923721 6923926 -22080730 - DMLTR5 LTR Gypsy 0 266 44 8 637 607 13 0 0 chrUextra 6924141 6924216 -22080440 + MAX_I LTR Pao 7840 7914 0 8 637 2729 12 0 0 chrUextra 6924216 6924537 -22080119 + MAX_LTR LTR Pao 1 321 0 8 637 2003 168 7 9 chrUextra 6924537 6924969 -22079687 + SAR_DM Satellite Satellite 432 862 -610 8 637 4961 46 60 0 chrUextra 6925071 6925848 -22078808 - PROTOP DNA P -3727 753 1 8 637 2864 192 21 22 chrUextra 6926001 6926831 -22077825 + SAR_DM Satellite Satellite 1 829 -354 8 637 3463 172 18 23 chrUextra 6926931 6927756 -22076900 + SAR_DM Satellite Satellite 371 1191 -281 8 637 7198 6 0 0 chrUextra 6927861 6928691 -22075965 - Gypsy6_I LTR Gypsy -4091 2921 2092 8 637 2420 7 7 3 chrUextra 6928791 6929093 -22075563 + ROVER-I_DM LTR Gypsy 6282 6584 0 8 637 2971 14 0 8 chrUextra 6929093 6929463 -22075193 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 637 497 0 136 7 chrUextra 6929463 6929617 -22075039 + (TA)n Simple_repeat Simple_repeat 2 175 0 8 637 33 0 0 0 chrUextra 6929727 6929760 -22074896 + AT_rich Low_complexity Low_complexity 1 33 0 8 637 2975 46 56 0 chrUextra 6930137 6930551 -22074105 - PROTOP_A DNA P 0 1105 669 8 637 2195 111 18 31 chrUextra 6930651 6931481 -22073175 + DMSAT6 Satellite Satellite 1 819 -28 8 637 6548 8 32 0 chrUextra 6931581 6932411 -22072245 + DM176_I LTR Gypsy 1105 1961 -4459 8 637 2745 96 40 92 chrUextra 6932517 6933341 -22071315 - TART LINE telomeric -3814 10663 10309 8 637 3282 190 21 9 chrUextra 6934380 6935194 -22069462 - SAR_DM Satellite Satellite -425 1047 224 8 637 3293 193 11 11 chrUextra 6935299 6936128 -22068528 - SAR_DM Satellite Satellite -446 1026 198 8 637 884 26 0 0 chrUextra 6936228 6936342 -22068314 + R1_DM LINE R1 3973 4086 -1270 8 637 5593 32 4 4 chrUextra 6936340 6937057 -22067599 + R1_DM LINE R1 4559 5275 -81 8 637 3183 170 15 29 chrUextra 6937158 6937962 -22066694 + SAR_DM Satellite Satellite 326 1118 -354 8 637 414 167 9 29 chrUextra 6937876 6937981 -22066675 - XDMR_DM Unknown Unknown 0 360 258 8 637 920 66 5 18 chrUextra 6938090 6938482 -22066174 + RSP Satellite Satellite 1 387 0 8 637 908 63 6 19 chrUextra 6938553 6938906 -22065750 + RSP Satellite Satellite 1 348 0 8 637 7080 5 0 0 chrUextra 6939015 6939844 -22064812 + R1_DM LINE R1 2173 3001 -2355 8 637 6695 19 26 0 chrUextra 6939944 6940773 -22063883 - R1_DM LINE R1 -2338 3018 2168 8 637 3123 193 17 35 chrUextra 6940873 6941696 -22062960 + SAR_DM Satellite Satellite 1 808 -227 8 637 898 19 0 0 chrUextra 6941802 6941908 -22062748 + PROTOP_A DNA P 1000 1105 0 8 637 361 93 0 0 chrUextra 6941908 6941962 -22062694 - STALKER4_LTR LTR Gypsy -348 54 1 8 637 316 141 52 42 chrUextra 6941962 6942058 -22062598 - STALKER4_I LTR Gypsy 0 6530 6434 8 637 23 0 0 0 chrUextra 6942063 6942086 -22062570 + AT_rich Low_complexity Low_complexity 1 23 0 8 637 2966 26 5 3 chrUextra 6942086 6942467 -22062189 - IDEFIX_LTR LTR Gypsy 0 594 213 8 637 810 10 0 0 chrUextra 6942465 6942565 -22062091 - IDEFIX_LTR LTR Gypsy -494 100 1 8 637 519 45 0 0 chrUextra 6942565 6942631 -22062025 - IDEFIX_I LTR Gypsy 0 5628 5563 8 637 5483 5 0 0 chrUextra 6943660 6944307 -22060349 + PROTOP_A DNA P 459 1105 0 8 637 817 61 8 8 chrUextra 6944357 6944489 -22060167 + TRANSIB4 DNA Transib 1 132 -2478 8 637 2360 115 24 23 chrUextra 6944589 6945418 -22059238 + DMSAT6 Satellite Satellite 1 829 -97 8 637 372 286 70 70 chrUextra 6945539 6945956 -22058700 + BLASTOPIA_I LTR Gypsy 2180 2596 -1885 8 637 311 325 0 0 chrUextra 6945969 6946095 -22058561 + Invader2_I LTR Gypsy 2624 2749 -1843 8 79 3036 193 17 25 chrUextra 6946453 6947261 -22057395 - SAR_DM Satellite Satellite -300 1172 371 8 638 2612 22 0 0 chrUextra 6947376 6947693 -22056963 - DMRT1B LINE R1 -1149 4034 3718 8 638 4335 19 0 0 chrUextra 6947687 6948205 -22056451 - DMRT1B LINE R1 -1572 3611 3094 8 638 2445 20 3 10 chrUextra 6948305 6948608 -22056048 - BATUMI_I LTR Pao -1991 5972 5672 8 638 4530 9 0 0 chrUextra 6948606 6949134 -22055522 - BATUMI_I LTR Pao -2648 5315 4788 8 638 1512 45 0 0 chrUextra 6949234 6949458 -22055198 + (CTATT)n Simple_repeat Simple_repeat 1 224 0 8 638 1479 81 7 7 chrUextra 6949469 6950004 -22054652 + (CTATT)n Simple_repeat Simple_repeat 1 535 0 8 638 251 85 21 0 chrUextra 6950016 6950063 -22054593 + (CTATT)n Simple_repeat Simple_repeat 2 49 0 8 638 559 193 11 6 chrUextra 6950183 6950360 -22054296 + (TTATG)n Simple_repeat Simple_repeat 2 179 0 8 638 2295 4 0 0 chrUextra 6950375 6950642 -22054014 + MDG3_LTR LTR Gypsy 1 267 0 8 638 3009 0 0 3 chrUextra 6950641 6950992 -22053664 + MDG3_I LTR Gypsy 1 350 -4636 8 638 3017 23 2 111 chrUextra 6951092 6951578 -22053078 - PROTOP_A DNA P -476 629 197 8 638 2266 83 0 9 chrUextra 6951579 6951920 -22052736 + R1_DM LINE R1 720 1057 -4299 8 638 2640 208 84 10 chrUextra 6952021 6952831 -22051825 - SAR_DM Satellite Satellite -261 1211 342 8 638 743 100 0 0 chrUextra 6952950 6953070 -22051586 - ARS406_DM Unknown Unknown -233 120 1 8 638 3206 184 35 12 chrUextra 6952977 6953779 -22050877 + SAR_DM Satellite Satellite 195 1014 -458 8 638 3226 195 10 17 chrUextra 6953879 6954708 -22049948 + SAR_DM Satellite Satellite 1 823 -227 8 638 430 111 25 0 chrUextra 6954808 6954889 -22049767 - SAR_DM Satellite Satellite -851 621 539 8 638 987 190 42 20 chrUextra 6954900 6955636 -22049020 - SAR_DM Satellite Satellite -683 751 1 8 638 392 222 99 0 chrUextra 6955884 6956046 -22048610 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 8 638 326 239 98 0 chrUextra 6955959 6956122 -22048534 + (CAGAA)n Simple_repeat Simple_repeat 1 179 0 8 638 260 196 82 41 chrUextra 6956106 6956276 -22048380 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 8 638 248 185 89 36 chrUextra 6956213 6956381 -22048275 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 8 638 339 225 106 0 chrUextra 6956402 6956562 -22048094 + (CAAGA)n Simple_repeat Simple_repeat 4 180 0 8 638 876 53 0 0 chrUextra 6956683 6956796 -22047860 - CIRCE LINE Composite -5271 1085 973 8 638 3691 68 0 50 chrUextra 6956938 6957493 -22047163 - CIRCE LINE Composite -5386 970 444 8 638 4275 88 88 14 chrUextra 6957594 6958422 -22046234 - Gypsy12_I LTR Gypsy -487 5059 4112 8 638 1092 139 64 5 chrUextra 6959617 6959820 -22044836 + DNAREP1_DM LINE Penelope 22 236 -358 8 638 212 0 0 35 chrUextra 6959850 6959879 -22044777 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 638 6819 19 10 0 chrUextra 6960378 6961205 -22043451 + R1_DM LINE R1 1765 2599 -2757 8 638 4438 135 16 0 chrUextra 6961306 6962134 -22042522 + TART_B1 LINE telomeric 1105 1945 -8709 8 638 6358 21 69 1 chrUextra 6962238 6963062 -22041594 - R1_DM LINE R1 -1268 4088 3209 8 638 6930 13 1 0 chrUextra 6963163 6963990 -22040666 - DMRT1B LINE R1 -2319 2864 2037 8 638 1503 0 0 0 chrUextra 6964090 6964257 -22040399 + (CACAA)n Simple_repeat Simple_repeat 1 167 0 8 638 5476 8 0 9 chrUextra 6964258 6964918 -22039738 + DMRT1B LINE R1 2760 3413 -1770 8 638 2872 40 45 0 chrUextra 6965018 6965392 -22039264 + DOC3_DM LINE Jockey 2307 2697 -2043 8 638 1516 35 5 0 chrUextra 6965390 6965589 -22039067 + DOC3_DM LINE Jockey 4540 4739 -1 8 638 939 142 142 28 chrUextra 6965550 6965839 -22038817 - Gypsy12A_LTR LTR Gypsy -532 1748 1427 8 638 747 0 0 0 chrUextra 6966691 6966774 -22037882 + (CAAGA)n Simple_repeat Simple_repeat 3 85 0 8 638 4863 20 28 17 chrUextra 6968730 6969558 -22035098 + ACCORD2_I LTR Gypsy 5156 6102 -1110 8 638 6754 17 13 0 chrUextra 6969658 6970486 -22034170 + DOC2_DM LINE Jockey 1385 2223 -2570 8 638 407 168 0 21 chrUextra 6970610 6970707 -22033949 + HETA LINE telomeric 4350 4444 -1637 8 638 1079 200 40 40 chrUextra 6970703 6971031 -22033625 + TAHRE LINE telomeric 9356 9683 -780 8 638 4598 157 8 6 chrUextra 6971514 6972341 -22032315 - Gypsy5_I LTR Gypsy -2428 4081 3253 8 638 6930 20 2 0 chrUextra 6972442 6973270 -22031386 + DIVER2_I LTR Pao 3269 4098 -49 8 638 3134 194 15 20 chrUextra 6973370 6974182 -22030474 + SAR_DM Satellite Satellite 438 1245 -227 8 638 684 63 0 0 chrUextra 6974103 6974198 -22030458 - ARS406_DM Unknown Unknown -164 189 95 8 638 4102 48 78 5 chrUextra 6974298 6975126 -22029530 + IDEFIX_I LTR Gypsy 1009 1897 -3731 8 638 366 22 0 0 chrUextra 6976008 6976053 -22028603 + PROTOP_B DNA P 1 45 -1108 8 638 4347 29 104 0 chrUextra 6976154 6976982 -22027674 - R1_DM LINE R1 -1719 3637 2724 8 638 23 68 0 0 chrUextra 6977209 6977253 -22027403 + AT_rich Low_complexity Low_complexity 1 44 0 8 638 28 71 0 0 chrUextra 6977299 6977355 -22027301 + AT_rich Low_complexity Low_complexity 1 56 0 8 638 2954 44 14 19 chrUextra 6977494 6977910 -22026746 - PROTOP_A DNA P -592 513 100 8 638 6778 25 0 4 chrUextra 6978010 6978838 -22025818 - R1_DM LINE R1 -2592 2764 1940 8 638 1149 328 9 14 chrUextra 6978938 6979582 -22025074 - Invader6_I LTR Gypsy -1698 2401 1761 8 638 590 305 0 0 chrUextra 6979579 6979766 -22024890 - Invader6_I LTR Gypsy -2189 1910 1724 8 638 2811 211 10 16 chrUextra 6979866 6980693 -22023963 + SAR_DM Satellite Satellite 1 822 -227 8 638 592 272 37 56 chrUextra 6981014 6981283 -22023373 - TV1I LTR Gypsy -5118 942 669 8 638 1614 100 0 27 chrUextra 6981366 6981622 -22023034 - Gypsy12_I LTR Gypsy -4442 1104 856 8 638 3249 186 17 21 chrUextra 6981725 6982550 -22022106 + SAR_DM Satellite Satellite 337 1158 -314 8 638 4645 8 3 2 chrUextra 6982650 6983240 -22021416 + DM176_I LTR Gypsy 5418 6008 -412 8 638 1672 41 111 28 chrUextra 6983226 6983478 -22021178 + ROO_I LTR Pao 4199 4471 -3785 8 638 23 0 0 0 chrUextra 6983578 6983601 -22021055 + AT_rich Low_complexity Low_complexity 1 23 0 8 638 1083 256 52 85 chrUextra 6983603 6984390 -22020266 + TOM_I LTR Gypsy 1 761 -5351 8 638 1235 19 0 0 chrUextra 6984506 6984666 -22019990 + G2_DM LINE Jockey 2937 3096 -6 8 638 4012 39 36 82 chrUextra 6984665 6985334 -22019322 + Invader2_I LTR Gypsy 700 1337 -3255 8 638 917 52 29 0 chrUextra 6985435 6985571 -22019085 - PROTOP_A DNA P -547 558 419 8 638 5681 7 10 0 chrUextra 6985571 6986262 -22018394 - PROTOP_A DNA P 0 1105 408 8 638 2586 99 144 45 chrUextra 6986362 6987108 -22017548 - BATUMI_I LTR Pao -6384 1579 760 8 638 3169 199 8 9 chrUextra 6987319 6988115 -22016541 - SAR_DM Satellite Satellite -396 1076 282 8 638 6006 65 11 8 chrUextra 6988219 6989046 -22015610 - BATUMI_I LTR Pao -3773 4190 3362 8 638 359 138 92 0 chrUextra 6989294 6989359 -22015297 + G3_DM LINE Jockey 509 579 -4026 8 638 6820 24 0 0 chrUextra 6990074 6990902 -22013754 - R1_DM LINE R1 -2666 2690 1863 8 638 365 245 0 9 chrUextra 6991002 6991113 -22013543 - SAR_DM Satellite Satellite -1171 301 192 8 638 1182 64 6 0 chrUextra 6991018 6991190 -22013466 + ARS406_DM Unknown Unknown 1 173 -180 8 638 1795 165 13 10 chrUextra 6991210 6991596 -22013060 - SAR_DM Satellite Satellite -614 858 472 8 638 1101 150 5 5 chrUextra 6991616 6991830 -22012826 - SAR_DM Satellite Satellite -614 858 645 8 638 6438 5 1 8 chrUextra 6991930 6992756 -22011900 + STALKER4_I LTR Gypsy 5695 6514 -16 8 638 6401 16 6 1 chrUextra 6992858 6993661 -22010995 - QUASIMODO_I LTR Gypsy -4574 1486 680 8 638 3172 226 21 6 chrUextra 6994714 6995541 -22009115 + ROVER-I_DM LTR Gypsy 1952 2790 -3794 8 638 293 200 30 40 chrUextra 6995642 6995741 -22008915 + XDMR_DM Unknown Unknown 254 351 -9 8 638 3229 183 11 19 chrUextra 6995664 6996464 -22008192 - SAR_DM Satellite Satellite -353 1119 326 8 638 3465 0 0 2 chrUextra 6996588 6996991 -22007665 - STALKER4_LTR LTR Gypsy 0 402 1 8 638 2976 17 10 0 chrUextra 6996991 6997396 -22007260 - STALKER4_I LTR Gypsy 0 6530 6122 8 638 1565 11 0 0 chrUextra 6997496 6997681 -22006975 - Gypsy12_LTR LTR Gypsy -2151 185 1 8 638 228 132 0 0 chrUextra 6997681 6997719 -22006937 - Gypsy6A_LTR LTR Gypsy -12 408 371 8 638 1894 38 4 0 chrUextra 6997718 6997956 -22006700 - Gypsy6A_LTR LTR Gypsy -181 239 1 8 638 365 143 0 0 chrUextra 6997956 6998013 -22006643 + DNAREP1_DM LINE Penelope 59 115 -479 8 638 3182 175 55 13 chrUextra 6998424 6999248 -22005408 + SAR_DM Satellite Satellite 180 1037 -435 8 638 2237 90 22 35 chrUextra 6999353 7000000 -22004656 + DMSAT6 Satellite Satellite 1 638 -65 8 638 931 98 11 17 chrUextra 7000000 7000177 -22004479 + DMSAT6 Satellite Satellite 200 375 -95 8 638 1802 0 0 0 chrUextra 7000277 7000489 -22004167 - Copia_LTR LTR Copia -64 212 1 8 638 370 316 51 53 chrUextra 7000650 7001104 -22003552 - HMSBEAGLE_I LTR Gypsy -750 5779 5327 8 638 4913 5 5 0 chrUextra 7001204 7001794 -22002862 + STALKER4_I LTR Gypsy 2036 2628 -3902 8 638 1969 8 0 0 chrUextra 7001791 7002031 -22002625 + STALKER4_I LTR Gypsy 3052 3291 -3239 8 638 7116 1 2 2 chrUextra 7002131 7002958 -22001698 - SSU-rRNA_Dme rRNA rRNA -328 1667 841 8 638 22 0 0 0 chrUextra 7003118 7003140 -22001516 + AT_rich Low_complexity Low_complexity 1 22 0 8 638 575 336 41 26 chrUextra 7004190 7004655 -22000001 - NOMAD_I LTR Gypsy 0 6572 6101 8 638 7261 1 0 0 chrUextra 7004912 7005739 -21998917 + MAX_I LTR Pao 3679 4505 -3409 8 638 786 90 0 0 chrUextra 7005841 7005963 -21998693 - ARS406_DM Unknown Unknown -231 122 1 8 638 3354 181 9 11 chrUextra 7005867 7006666 -21997990 + SAR_DM Satellite Satellite 192 988 -484 8 638 1414 196 24 22 chrUextra 7006766 7007179 -21997477 + SAR_DM Satellite Satellite 663 1076 -396 8 638 1732 171 25 12 chrUextra 7007190 7007593 -21997063 + SAR_DM Satellite Satellite 543 950 -522 8 638 706 148 30 61 chrUextra 7008088 7008253 -21996403 - Gypsy5_LTR LTR Gypsy -194 236 77 8 638 583 73 0 0 chrUextra 7008257 7008339 -21996317 - Jockey2 LINE Jockey -3346 82 1 8 638 714 20 178 0 chrUextra 7010273 7010374 -21994282 + PROTOP_B DNA P 1 119 -1034 8 638 2022 101 182 38 chrUextra 7010474 7010874 -21993782 + TART_B1 LINE telomeric 3728 4185 -6469 8 638 2802 62 54 0 chrUextra 7010874 7011261 -21993395 + TART LINE telomeric 1452 1859 -12618 8 638 356 41 41 0 chrUextra 7011252 7011301 -21993355 + TART LINE telomeric 2045 2095 -12382 8 638 287 127 0 18 chrUextra 7011402 7011458 -21993198 + ARS406_DM Unknown Unknown 135 189 -164 8 638 3001 188 36 27 chrUextra 7011414 7012228 -21992428 - SAR_DM Satellite Satellite -261 1211 391 8 638 5605 1 0 0 chrUextra 7012328 7012975 -21991681 - R2_DM LINE R2 -2400 1207 561 8 638 1498 6 6 0 chrUextra 7012974 7013155 -21991501 - LSU-rRNA_Dme rRNA rRNA -1547 2353 2172 8 638 3079 185 33 17 chrUextra 7013255 7014071 -21990585 + SAR_DM Satellite Satellite 1 828 -208 8 638 2474 41 3 0 chrUextra 7014415 7014731 -21989925 - PROTOP DNA P 0 4480 4164 8 638 1094 72 17 0 chrUextra 7014733 7015005 -21989651 - PROTOP_A DNA P -3723 757 573 8 638 3351 177 22 19 chrUextra 7015109 7015932 -21988724 + SAR_DM Satellite Satellite 294 1118 -354 8 638 6665 15 0 10 chrUextra 7016036 7016860 -21987796 - Gypsy4_I LTR Gypsy -5331 957 142 8 638 2775 177 10 5 chrUextra 7016963 7017577 -21987079 + SAR_DM Satellite Satellite 230 846 -626 8 638 1857 5 0 0 chrUextra 7017574 7017790 -21986866 + DM1731_I LTR Copia 2068 2283 -1693 8 638 246 150 0 0 chrUextra 7017891 7017931 -21986725 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 238 150 0 0 chrUextra 7017983 7018023 -21986633 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 246 150 0 0 chrUextra 7018075 7018115 -21986541 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 238 150 0 0 chrUextra 7018262 7018302 -21986354 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 235 175 0 0 chrUextra 7018354 7018394 -21986262 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 246 150 0 0 chrUextra 7018446 7018486 -21986170 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 226 175 0 0 chrUextra 7018538 7018578 -21986078 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 238 150 0 0 chrUextra 7018630 7018670 -21985986 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 257 287 58 84 chrUextra 7018865 7019055 -21985601 + Invader1_LTR LTR Gypsy 184 368 -55 8 638 6943 7 0 7 chrUextra 7019744 7020571 -21984085 + STALKER4_I LTR Gypsy 3970 4790 -1740 8 638 244 128 0 21 chrUextra 7020830 7020878 -21983778 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 638 244 128 0 21 chrUextra 7021104 7021152 -21983504 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 638 351 49 65 16 chrUextra 7021174 7021236 -21983420 - HMSBEAGLE_I LTR Gypsy -6464 65 1 8 638 893 173 102 15 chrUextra 7021235 7021440 -21983216 - DMLTR5 LTR Gypsy 0 266 44 8 638 1737 47 172 0 chrUextra 7022037 7022292 -21982364 + PROTOP DNA P 1 299 -4181 8 638 776 34 185 0 chrUextra 7022279 7022425 -21982231 + PROTOP_B DNA P 520 692 -461 8 638 2628 201 70 14 chrUextra 7022527 7023352 -21981304 - SAR_DM Satellite Satellite -318 1154 284 8 638 6597 17 51 4 chrUextra 7023452 7024279 -21980377 - DMRT1B LINE R1 -2686 2497 1632 8 638 575 142 0 0 chrUextra 7024379 7024485 -21980171 - ARS406_DM Unknown Unknown -247 106 1 8 638 3389 194 6 10 chrUextra 7024392 7025206 -21979450 + SAR_DM Satellite Satellite 195 1005 -467 8 638 5290 19 12 0 chrUextra 7025492 7026133 -21978523 - LSU-rRNA_Dme rRNA rRNA 0 3900 3252 8 638 894 130 0 17 chrUextra 7026880 7027060 -21977596 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 8 638 6972 5 4 6 chrUextra 7027160 7027987 -21976669 - DM1731_I LTR Copia -146 3830 3006 8 638 3814 129 6 6 chrUextra 7028087 7028899 -21975757 + BATUMI_I LTR Pao 3862 4749 -3165 8 638 267 233 0 0 chrUextra 7029016 7029076 -21975580 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 8 638 1031 134 0 6 chrUextra 7029076 7029256 -21975400 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 638 2990 14 0 5 chrUextra 7029257 7029626 -21975030 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 638 1756 5 0 9 chrUextra 7029626 7029840 -21974816 + ROVER-I_DM LTR Gypsy 1 212 -6372 8 638 1985 167 10 7 chrUextra 7029946 7030765 -21973891 + SAR_DM Satellite Satellite 1 821 -679 8 638 2603 69 0 6 chrUextra 7030866 7031231 -21973425 + BATUMI_I LTR Pao 7601 7963 0 8 638 3542 47 0 0 chrUextra 7031239 7031690 -21972966 + BATUMI_I LTR Pao 4630 5080 -2883 8 638 4932 18 69 1 chrUextra 7032718 7033543 -21971113 + FW_DM LINE Jockey 3366 4246 -446 8 638 972 106 34 78 chrUextra 7033644 7033849 -21970807 - ACCORD2_I LTR Gypsy -7016 196 1 8 638 593 196 48 113 chrUextra 7033849 7034079 -21970577 - ACCORD2_LTR LTR Gypsy 0 215 1 8 638 788 127 191 89 chrUextra 7034079 7034304 -21970352 + IDEFIX_LTR LTR Gypsy 347 594 0 8 638 513 139 11 11 chrUextra 7034383 7034470 -21970186 - PROTOP_B DNA P -957 196 110 8 638 6204 30 1 1 chrUextra 7034570 7035396 -21969260 - IDEFIX_I LTR Gypsy -246 5382 4557 8 638 2610 0 0 0 chrUextra 7035496 7035792 -21968864 - DMRT1B LINE R1 -4814 369 74 8 638 4055 25 9 0 chrUextra 7035794 7036322 -21968334 - IDEFIX_I LTR Gypsy -496 5132 4600 8 638 3203 199 6 9 chrUextra 7036453 7037248 -21967408 - SAR_DM Satellite Satellite -396 1076 284 8 638 1744 122 336 41 chrUextra 7037348 7037976 -21966680 + Gypsy12_I LTR Gypsy 92 976 -4570 8 638 385 281 0 0 chrUextra 7037983 7038105 -21966551 + DM297_I LTR Gypsy 3337 3458 -2709 8 638 349 95 14 87 chrUextra 7038105 7038174 -21966482 + Gypsy12_LTR LTR Gypsy 1 64 -2272 8 638 6659 13 31 11 chrUextra 7038274 7039100 -21965556 - CIRCE LINE Composite -1997 4359 3517 8 638 501 240 0 8 chrUextra 7040146 7040276 -21964380 + IDEFIX_I LTR Gypsy 926 1054 -4574 8 638 615 0 0 0 chrUextra 7040293 7040364 -21964292 + DOC3_DM LINE Jockey 1 71 -4669 8 638 2884 40 33 2 chrUextra 7040362 7040758 -21963898 + DOC3_DM LINE Jockey 643 1050 -3690 8 638 1600 24 14 19 chrUextra 7040740 7040952 -21963704 + DOC3_DM LINE Jockey 1512 1722 -3018 8 638 7129 8 0 0 chrUextra 7041052 7041878 -21962778 - Invader1_I LTR Gypsy -1377 1809 984 8 638 3099 226 5 8 chrUextra 7041980 7042802 -21961854 - DM412 LTR Gypsy -573 6324 5506 8 638 596 127 9 0 chrUextra 7042904 7043014 -21961642 - ARS406_DM Unknown Unknown -242 111 1 8 638 3136 193 11 14 chrUextra 7042922 7043730 -21960926 + SAR_DM Satellite Satellite 195 1000 -472 8 638 2486 88 32 22 chrUextra 7043830 7044653 -21960003 + DMSAT6 Satellite Satellite 1 831 -74 8 638 7083 2 0 2 chrUextra 7044756 7045582 -21959074 - HETA LINE telomeric -3666 2415 1592 8 638 1626 47 5 0 chrUextra 7045682 7045893 -21958763 - Baggins1 LINE LOA -352 5101 4890 8 638 2145 53 25 12 chrUextra 7046186 7046508 -21958148 - Jockey2 LINE Jockey 0 3428 3103 8 638 2567 220 13 56 chrUextra 7046609 7047360 -21957296 - Gypsy12_LTR LTR Gypsy -1617 719 1 8 638 532 56 0 0 chrUextra 7047362 7047434 -21957222 - Gypsy12_I LTR Gypsy -2 5544 5473 8 638 2821 33 0 8 chrUextra 7047534 7047905 -21956751 + CIRCE LINE Composite 4613 4980 -1376 8 638 1682 41 5 5 chrUextra 7048095 7048314 -21956342 - R1_DM LINE R1 -4037 1319 1101 8 638 256 120 0 20 chrUextra 7048309 7048360 -21956296 - R1_DM LINE R1 -4921 435 386 8 638 869 9 0 9 chrUextra 7048460 7048567 -21956089 - NTS_DM Other Other -134 106 1 8 638 1745 17 17 17 chrUextra 7048567 7048807 -21955849 - NTS_DM Other Other 0 240 1 8 638 1803 17 17 13 chrUextra 7048807 7049046 -21955610 - NTS_DM Other Other 0 240 1 8 638 1781 13 17 17 chrUextra 7049046 7049286 -21955370 - NTS_DM Other Other 0 240 1 8 638 415 51 0 0 chrUextra 7049386 7049445 -21955211 + Gypsy12_I LTR Gypsy 5488 5546 0 8 638 2189 194 17 42 chrUextra 7049444 7049986 -21954670 + Gypsy12_LTR LTR Gypsy 1 528 -1808 8 638 275 287 0 11 chrUextra 7050085 7050180 -21954476 + Gypsy12_LTR LTR Gypsy 679 772 -1564 8 638 700 246 107 11 chrUextra 7050328 7050599 -21954057 - BS LINE Jockey -1688 3438 3142 8 638 1082 239 7 7 chrUextra 7050855 7051137 -21953519 - BS LINE Jockey -2328 2798 2517 8 638 207 0 0 0 chrUextra 7051238 7051261 -21953395 + (TTA)n Simple_repeat Simple_repeat 3 25 0 8 638 751 62 102 0 chrUextra 7051261 7051389 -21953267 - MDG1_I LTR Gypsy -1721 4875 4735 8 638 1042 20 0 0 chrUextra 7051394 7051540 -21953116 - FW_DM LINE Jockey 0 4692 4547 8 638 414 124 185 50 chrUextra 7051534 7051628 -21953028 - MDG1_LTR LTR Gypsy -241 201 87 8 638 1272 7 0 0 chrUextra 7051628 7051773 -21952883 + (TTA)n Simple_repeat Simple_repeat 3 147 0 8 638 623 128 104 0 chrUextra 7051773 7051898 -21952758 - MDG1_I LTR Gypsy -1721 4875 4738 8 638 941 62 0 7 chrUextra 7051908 7052055 -21952601 - FW_DM LINE Jockey 0 4692 4547 8 638 2890 211 29 11 chrUextra 7052164 7052962 -21951694 - SAR_DM Satellite Satellite -519 812 1 8 638 2110 237 44 65 chrUextra 7053090 7053916 -21950740 - Gypsy12_LTR LTR Gypsy -1301 1035 228 8 638 2503 185 7 20 chrUextra 7054016 7054047 -21950609 + SAR_DM Satellite Satellite 1 37 -1271 8 638 1073 81 0 0 chrUextra 7054047 7054208 -21950448 - ARS406_DM Unknown Unknown -164 189 29 8 638 2503 185 7 20 chrUextra 7054208 7054837 -21949819 + SAR_DM Satellite Satellite 38 810 -498 8 638 6741 13 40 5 chrUextra 7054942 7055768 -21948888 - Gypsy2_I LTR Gypsy -3493 2642 1788 8 638 6506 19 4 6 chrUextra 7055868 7056694 -21947962 + PROTOP_A DNA P 39 862 -243 8 638 6546 35 18 1 chrUextra 7056794 7057620 -21947036 - DMCR1A LINE CR1 -568 3902 3063 8 638 6764 19 1 5 chrUextra 7057720 7058546 -21946110 + R1_DM LINE R1 1913 2735 -2621 8 638 2336 25 0 0 chrUextra 7058647 7058928 -21945728 - PROTOP_A DNA P -824 281 1 8 638 2132 45 4 0 chrUextra 7058928 7059197 -21945459 + ROO_LTR LTR Pao 159 428 0 8 638 1515 48 7 4 chrUextra 7059197 7059471 -21945185 + (TTATA)n Simple_repeat Simple_repeat 1 274 0 8 638 3448 180 14 24 chrUextra 7059574 7060390 -21944266 - SAR_DM Satellite Satellite -511 808 1 8 638 725 42 0 0 chrUextra 7060498 7060593 -21944063 + ARS406_DM Unknown Unknown 95 189 -164 8 638 3079 201 12 20 chrUextra 7060511 7061324 -21943332 - SAR_DM Satellite Satellite -224 1248 442 8 638 882 0 0 0 chrUextra 7061424 7061522 -21943134 + (GAGAA)n Simple_repeat Simple_repeat 5 102 0 8 638 3328 36 17 2 chrUextra 7062407 7062829 -21941827 - ROO_LTR LTR Pao 0 428 1 8 638 26 50 0 0 chrUextra 7062864 7062904 -21941752 + AT_rich Low_complexity Low_complexity 1 40 0 8 638 39 50 0 0 chrUextra 7063075 7063135 -21941521 + AT_rich Low_complexity Low_complexity 1 60 0 8 638 511 16 0 0 chrUextra 7063276 7063337 -21941319 - Copia2_I LTR Copia -4101 61 1 8 638 1645 10 0 0 chrUextra 7063337 7063534 -21941122 - Copia2_LTR_DM LTR Copia 0 198 2 8 638 1488 18 0 0 chrUextra 7063534 7063754 -21940902 + (TTA)n Simple_repeat Simple_repeat 1 220 0 8 638 1060 81 19 0 chrUextra 7063775 7063935 -21940721 + Jockey2 LINE Jockey 3089 3251 -177 8 638 818 44 43 24 chrUextra 7063938 7064102 -21940554 + (TTA)n Simple_repeat Simple_repeat 2 168 0 8 638 2406 100 41 13 chrUextra 7064202 7065025 -21939631 - DMSAT6 Satellite Satellite -108 846 1 8 638 1067 154 28 16 chrUextra 7065148 7065399 -21939257 - SAR_DM Satellite Satellite -680 792 539 8 638 1110 183 19 6 chrUextra 7065410 7065927 -21938729 - SAR_DM Satellite Satellite -683 523 1 8 638 1904 4 0 90 chrUextra 7066052 7066320 -21938336 + DM176_LTR LTR Gypsy 40 283 -224 8 638 2020 20 16 0 chrUextra 7066321 7066574 -21938082 + DM176_LTR LTR Gypsy 251 507 0 8 638 1135 98 96 19 chrUextra 7066575 7066865 -21937791 - ZAM_I LTR Gypsy -6989 501 1 8 638 3419 60 72 3 chrUextra 7067142 7067802 -21936854 - PROTOP_A DNA P 0 1105 535 8 638 1216 182 10 24 chrUextra 7067902 7068200 -21936456 - HETA LINE telomeric -2333 3748 3455 8 638 2341 118 74 34 chrUextra 7068198 7068725 -21935931 - TART LINE telomeric -4425 10052 9505 8 638 4712 0 0 0 chrUextra 7068827 7069375 -21935281 + G2_DM LINE Jockey 2553 3100 -2 8 638 750 226 29 5 chrUextra 7069443 7069652 -21935004 + ROVER-I_DM LTR Gypsy 3937 4150 -2434 8 638 6655 30 0 1 chrUextra 7069752 7070577 -21934079 + R1_DM LINE R1 2625 3448 -1908 8 638 6611 6 1 1 chrUextra 7070677 7071502 -21933154 + DM297_I LTR Gypsy 888 1712 -4455 8 638 6691 23 0 0 chrUextra 7071602 7072425 -21932231 - FW_DM LINE Jockey -2961 1731 909 8 638 2864 177 10 10 chrUextra 7072527 7073352 -21931304 - SAR_DM Satellite Satellite -719 825 1 8 638 3200 182 22 21 chrUextra 7073454 7074266 -21930390 + SAR_DM Satellite Satellite 369 1181 -291 8 638 1745 70 50 40 chrUextra 7074377 7074675 -21929981 + HETRP_DM Satellite Satellite 656 956 -916 8 638 2858 37 7 24 chrUextra 7074787 7075198 -21929458 + HETRP_DM Satellite Satellite 13 416 -1456 8 638 1303 53 0 0 chrUextra 7075302 7075472 -21929184 + R1_DM LINE R1 1624 1793 -3563 8 638 1980 155 0 68 chrUextra 7075473 7075867 -21928789 + R1_DM LINE R1 310 676 -4680 8 638 1772 110 4 4 chrUextra 7075863 7076127 -21928529 + R1_DM LINE R1 1099 1362 -3994 8 638 2813 166 53 5 chrUextra 7076227 7076851 -21927805 - TART LINE telomeric -4874 9603 8950 8 638 1095 188 0 0 chrUextra 7076842 7077050 -21927606 - HETA LINE telomeric -2638 3443 3236 8 79 3299 189 15 16 chrUextra 7077153 7077977 -21926679 - SAR_DM Satellite Satellite -366 1106 284 8 639 4599 4 0 0 chrUextra 7078077 7078606 -21926050 + BS2 LINE Jockey 4193 4721 0 8 639 180 0 0 0 chrUextra 7078615 7078635 -21926021 + (A)n Simple_repeat Simple_repeat 1 20 0 8 639 2022 32 0 0 chrUextra 7078635 7078882 -21925774 + BATUMI_I LTR Pao 4075 4321 -3642 8 639 517 42 56 0 chrUextra 7079002 7079074 -21925582 - DM176_LTR LTR Gypsy -181 326 251 8 639 2190 11 0 78 chrUextra 7079075 7079382 -21925274 - DM176_LTR LTR Gypsy -224 283 1 8 639 229 161 51 0 chrUextra 7079382 7079490 -21925166 + MDG1_I LTR Gypsy 773 886 -5710 8 639 2161 53 71 0 chrUextra 7079504 7079827 -21924829 + MDG1_I LTR Gypsy 1193 1538 -5058 8 639 6669 28 10 1 chrUextra 7079927 7080752 -21923904 + R1_DM LINE R1 1393 2224 -3132 8 639 2777 174 15 24 chrUextra 7081777 7082450 -21922206 - SAR_DM Satellite Satellite -615 857 191 8 639 446 196 20 17 chrUextra 7082462 7082601 -21922055 - SAR_DM Satellite Satellite -396 1076 964 8 639 3327 164 24 42 chrUextra 7082708 7083518 -21921138 - SAR_DM Satellite Satellite -425 1047 253 8 639 2605 0 0 0 chrUextra 7083627 7083927 -21920729 - DOC LINE Jockey -4420 305 6 8 639 1141 82 82 0 chrUextra 7084233 7084416 -21920240 - DMCR1A LINE CR1 -1114 3356 3159 8 639 369 259 0 0 chrUextra 7084825 7084933 -21919723 + Gypsy7_I LTR Gypsy 1560 1667 -3317 8 639 1314 29 6 39 chrUextra 7084959 7085141 -21919515 - G5A_DM LINE Jockey -3 2838 2663 8 639 475 291 77 17 chrUextra 7085142 7085376 -21919280 + Gypsy7_I LTR Gypsy 1239 1486 -3498 8 639 1347 267 65 27 chrUextra 7085780 7086292 -21918364 - TOM_I LTR Gypsy -5147 965 435 8 639 2726 3 0 0 chrUextra 7086402 7086714 -21917942 + BS2 LINE Jockey 4410 4721 0 8 639 207 0 0 0 chrUextra 7086720 7086743 -21917913 + (A)n Simple_repeat Simple_repeat 1 23 0 8 639 2090 171 31 6 chrUextra 7086743 7087227 -21917429 - SAR_DM Satellite Satellite -444 1028 533 8 639 3132 184 18 20 chrUextra 7087327 7088152 -21916504 + SAR_DM Satellite Satellite 1 822 -208 8 639 4337 24 11 0 chrUextra 7088252 7088801 -21915855 + FW_DM LINE Jockey 2833 3387 -1305 8 639 2395 0 0 0 chrUextra 7088801 7089077 -21915579 + STALKER4_LTR LTR Gypsy 1 276 -126 8 639 6783 17 0 0 chrUextra 7089177 7090002 -21914654 + MDG3_I LTR Gypsy 2382 3206 -1780 8 639 560 267 16 16 chrUextra 7090398 7090588 -21914068 + Transib5 DNA Transib 1410 1599 -1402 8 639 33 56 0 0 chrUextra 7090672 7090726 -21913930 + AT_rich Low_complexity Low_complexity 1 54 0 8 639 234 98 24 0 chrUextra 7090886 7090927 -21913729 - BS2 LINE Jockey -678 4043 4002 8 639 5323 83 34 5 chrUextra 7091027 7091852 -21912804 + BATUMI_I LTR Pao 4315 5262 -2652 8 639 6709 23 1 1 chrUextra 7091952 7092777 -21911879 + R1_DM LINE R1 2028 2852 -2504 8 639 214 228 24 37 chrUextra 7092954 7093036 -21911620 + T-rich Low_complexity Low_complexity 2 82 0 8 639 180 0 0 0 chrUextra 7093441 7093461 -21911195 + (A)n Simple_repeat Simple_repeat 1 20 0 8 639 634 146 9 0 chrUextra 7093841 7093951 -21910705 + Gypsy12A_LTR LTR Gypsy 2152 2262 -18 8 639 906 223 241 30 chrUextra 7093958 7094365 -21910291 + TAHRE LINE telomeric 9807 10299 -164 8 639 287 122 81 30 chrUextra 7094417 7094517 -21910139 + TART LINE telomeric 10421 10489 -3988 8 639 1046 335 25 6 chrUextra 7094727 7095549 -21909107 - DM1731_I LTR Copia -259 3717 2845 8 639 2838 175 91 29 chrUextra 7095654 7096476 -21908180 + HETA LINE telomeric 4036 5266 -815 8 639 946 51 0 0 chrUextra 7096577 7096695 -21907961 + PROTOP DNA P 4363 4480 0 8 639 27 81 0 0 chrUextra 7097043 7097105 -21907551 + AT_rich Low_complexity Low_complexity 1 62 0 8 639 23 68 0 0 chrUextra 7097151 7097195 -21907461 + AT_rich Low_complexity Low_complexity 1 44 0 8 639 27 73 0 0 chrUextra 7097232 7097287 -21907369 + AT_rich Low_complexity Low_complexity 1 55 0 8 639 5522 41 14 8 chrUextra 7097584 7098323 -21906333 - R1_DM LINE R1 -4037 1319 577 8 639 6785 16 0 1 chrUextra 7098427 7099252 -21905404 + FW_DM LINE Jockey 933 1756 -2936 8 639 30 45 0 0 chrUextra 7099382 7099426 -21905230 + AT_rich Low_complexity Low_complexity 1 44 0 8 639 1949 183 51 29 chrUextra 7099433 7099946 -21904710 + Stalker2_I LTR Gypsy 291 814 -6588 8 639 1665 14 0 32 chrUextra 7099961 7100177 -21904479 + STALKER4_I LTR Gypsy 1064 1272 -5258 8 639 3176 188 57 39 chrUextra 7100277 7101102 -21903554 - TAHRE LINE telomeric -2595 7868 7029 8 639 6823 13 0 0 chrUextra 7102127 7102952 -21901704 - STALKER4_I LTR Gypsy -767 5763 4939 8 639 1279 117 65 0 chrUextra 7103055 7103269 -21901387 + Invader1_LTR LTR Gypsy 196 423 0 8 639 2033 126 95 82 chrUextra 7103341 7103877 -21900779 - HMSBEAGLE_I LTR Gypsy -5951 578 36 8 639 3501 4 31 0 chrUextra 7103977 7104435 -21900221 + Invader2_I LTR Gypsy 4121 4592 0 8 639 2176 23 8 0 chrUextra 7104435 7104699 -21899957 + Invader2_LTR LTR Gypsy 1 266 0 8 639 400 170 41 41 chrUextra 7104703 7104801 -21899855 + Gypsy6_I LTR Gypsy 3447 3544 -3468 8 639 6754 34 0 0 chrUextra 7104902 7105727 -21898929 - BS2 LINE Jockey -835 3886 3062 8 639 3939 23 2 0 chrUextra 7105827 7106307 -21898349 + R1_DM LINE R1 4876 5356 0 8 639 2069 68 55 6 chrUextra 7106340 7106651 -21898005 + R1_DM LINE R1 1 326 -5030 8 639 2932 132 4 10 chrUextra 7106751 7107262 -21897394 + TAHRE LINE telomeric 9946 10453 -10 8 639 2554 3 3 3 chrUextra 7107262 7107575 -21897081 + HETA LINE telomeric 4462 4774 -1307 8 639 739 219 0 0 chrUextra 7107678 7107874 -21896782 + SAR_DM Satellite Satellite 528 723 -749 8 639 2486 174 26 18 chrUextra 7107885 7108499 -21896157 + SAR_DM Satellite Satellite 191 809 -663 8 639 1119 94 27 6 chrUextra 7108600 7108867 -21895789 + PROTOP_A DNA P 573 773 -332 8 639 4247 6 0 2 chrUextra 7108911 7109423 -21895233 - DOC LINE Jockey 0 4725 4215 8 639 2317 91 12 51 chrUextra 7109523 7110342 -21894314 - DMSAT6 Satellite Satellite -71 787 1 8 639 2079 16 0 0 chrUextra 7110447 7110700 -21893956 - STALKER4_I LTR Gypsy -1303 5227 4975 8 639 2313 122 13 13 chrUextra 7110722 7111271 -21893385 + DMSAT6 Satellite Satellite 1 548 -3 8 639 2381 168 30 18 chrUextra 7111388 7111951 -21892705 + SAR_DM Satellite Satellite 326 895 -577 8 639 507 135 0 0 chrUextra 7112020 7112109 -21892547 + SAR_DM Satellite Satellite 543 631 -841 8 639 397 183 0 0 chrUextra 7112102 7112195 -21892461 - ARS406_DM Unknown Unknown -224 129 37 8 639 631 25 0 0 chrUextra 7112295 7112375 -21892281 - MICROPIA_LTR LTR Gypsy -395 81 2 8 639 5316 19 0 0 chrUextra 7112405 7113042 -21891614 - Copia2_I LTR Copia 0 4162 3526 8 639 1846 178 11 7 chrUextra 7113219 7114043 -21890613 - SAR_DM Satellite Satellite -708 826 1 8 639 5017 64 55 18 chrUextra 7114143 7114967 -21889689 + STALKER4_I LTR Gypsy 709 1562 -4968 8 639 7113 1 2 2 chrUextra 7115067 7115891 -21888765 - SSU-rRNA_Dme rRNA rRNA -147 1848 1025 8 639 351 0 0 0 chrUextra 7115991 7116030 -21888626 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 639 2882 24 118 0 chrUextra 7116915 7117296 -21887360 - R1_DM LINE R1 -1671 3685 3260 8 639 1884 39 8 45 chrUextra 7117296 7117562 -21887094 + BLOOD_LTR LTR Gypsy 1 256 -143 8 639 466 35 0 0 chrUextra 7117679 7117737 -21886919 + BLOOD_I LTR Gypsy 1 58 -6555 8 639 1587 9 0 0 chrUextra 7117843 7118065 -21886591 + (TTATA)n Simple_repeat Simple_repeat 1 222 0 8 639 2239 36 103 0 chrUextra 7118065 7118366 -21886290 + DM1731_LTR LTR Copia 5 336 0 8 639 2552 0 3 0 chrUextra 7118366 7118663 -21885993 + DM1731_I LTR Copia 1 298 -3678 8 639 5179 2 0 0 chrUextra 7118763 7119356 -21885300 - DOC LINE Jockey -4123 602 10 8 639 233 0 0 161 chrUextra 7119371 7119582 -21885074 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 8 639 5032 43 30 99 chrUextra 7119687 7120511 -21884145 - Stalker2_I LTR Gypsy -2702 4700 3934 8 639 2103 0 0 0 chrUextra 7120611 7120855 -21883801 + Copia_I LTR Copia 4350 4593 0 8 639 2256 4 0 4 chrUextra 7120855 7121132 -21883524 + Copia_LTR LTR Copia 1 276 0 8 639 265 402 0 0 chrUextra 7121535 7121632 -21883024 + polypyrimidine Low_complexity Low_complexity 1 97 0 8 639 3600 22 121 4 chrUextra 7122459 7123282 -21881374 + R1_DM LINE R1 2983 3902 -1454 8 639 886 291 0 4 chrUextra 7123383 7123642 -21881014 - TOM_I LTR Gypsy -5227 885 628 8 639 652 125 18 106 chrUextra 7123773 7123943 -21880713 - TOM_I LTR Gypsy -5957 155 1 8 639 1738 46 99 8 chrUextra 7123943 7124205 -21880451 - DMTOM1_LTR LTR Gypsy 0 410 125 8 639 3554 167 16 15 chrUextra 7124307 7125131 -21879525 + SAR_DM Satellite Satellite 212 1036 -436 8 639 4975 22 84 1 chrUextra 7125231 7126055 -21878601 - R1_DM LINE R1 -1422 3934 3043 8 639 3467 186 7 8 chrUextra 7126155 7126979 -21877677 + SAR_DM Satellite Satellite 254 1076 -396 8 639 1620 0 0 0 chrUextra 7127081 7127361 -21877295 + (CACAA)n Simple_repeat Simple_repeat 1 280 0 8 639 3438 2 0 2 chrUextra 7127391 7127794 -21876862 - STALKER4_LTR LTR Gypsy 0 402 1 8 639 768 10 0 37 chrUextra 7127794 7127903 -21876753 - STALKER4_I LTR Gypsy 0 6530 6426 8 639 862 19 0 0 chrUextra 7128927 7129033 -21875623 - FW_DM LINE Jockey -3189 1503 1398 8 639 5897 18 1 3 chrUextra 7129029 7129751 -21874905 - FW_DM LINE Jockey -3936 756 36 8 639 3063 190 23 40 chrUextra 7129853 7129877 -21874779 + SAR_DM Satellite Satellite 1 39 -984 8 639 840 263 26 17 chrUextra 7129877 7130222 -21874434 - XDMR_DM Unknown Unknown -7 353 6 8 639 3063 190 23 40 chrUextra 7130222 7130675 -21873981 + SAR_DM Satellite Satellite 40 807 -216 8 639 3911 31 0 0 chrUextra 7130775 7131260 -21873396 + NINJA_I LTR Pao 1156 1640 -4371 8 639 1727 58 0 0 chrUextra 7132653 7132879 -21871777 + PROTOP_B DNA P 73 297 -856 8 639 2316 85 81 126 chrUextra 7132866 7133447 -21871209 + PROTOP_B DNA P 520 1074 -79 8 639 5663 85 65 1 chrUextra 7133547 7134371 -21870285 - Gypsy12_I LTR Gypsy -11 5535 4659 8 639 4044 0 0 2 chrUextra 7134471 7134940 -21869716 + ACCORD_LTR LTR Gypsy 91 558 0 8 639 5178 21 119 1 chrUextra 7135395 7136219 -21868437 - IDEFIX_I LTR Gypsy -4141 1487 567 8 639 3328 185 16 19 chrUextra 7136320 7137142 -21867514 + SAR_DM Satellite Satellite 346 1164 -308 8 639 234 0 0 0 chrUextra 7137243 7137269 -21867387 + (TATAA)n Simple_repeat Simple_repeat 4 29 0 8 639 1416 39 0 0 chrUextra 7137289 7137468 -21867188 + (CAATA)n Simple_repeat Simple_repeat 1 179 0 8 639 3372 179 11 20 chrUextra 7138166 7138983 -21865673 - SAR_DM Satellite Satellite -417 1055 246 8 639 251 130 0 0 chrUextra 7138943 7138989 -21865667 + ARS406_DM Unknown Unknown 1 46 -307 8 639 1307 55 20 29 chrUextra 7139089 7139293 -21865363 - CIRCE LINE Composite -4832 1524 1323 8 639 392 341 32 18 chrUextra 7139174 7139452 -21865204 - Gypsy12_I LTR Gypsy -2177 3369 3088 8 639 2165 63 6 78 chrUextra 7139393 7139738 -21864918 - CIRCE LINE Composite -5064 1292 973 8 639 232 62 0 0 chrUextra 7139880 7139912 -21864744 - CIRCE LINE Composite -5386 970 939 8 639 5099 3 0 3 chrUextra 7140012 7140607 -21864049 + LSU-rRNA_Dme rRNA rRNA 1864 2456 -1444 8 639 1930 0 0 0 chrUextra 7140610 7140835 -21863821 + R2_DM LINE R2 603 827 -2780 8 639 3569 131 15 24 chrUextra 7140935 7141695 -21862961 + MDG1_I LTR Gypsy 5693 6799 -98 8 639 477 34 0 0 chrUextra 7141699 7141758 -21862898 + (TAA)n Simple_repeat Simple_repeat 3 61 0 8 639 2192 126 33 26 chrUextra 7141862 7142675 -21861981 + DMSAT6 Satellite Satellite 1 819 -49 8 639 5724 1 1 0 chrUextra 7142781 7143440 -21861216 + LSU-rRNA_Dme rRNA rRNA 1970 2629 -1271 8 639 1407 6 0 0 chrUextra 7143440 7143604 -21861052 + R2_DM LINE R2 2430 2593 -1014 8 639 1247 248 6 15 chrUextra 7143704 7144032 -21860624 + ROVER-I_DM LTR Gypsy 939 1263 -5321 8 639 1175 259 43 49 chrUextra 7144020 7144527 -21860129 + ROVER-I_DM LTR Gypsy 1515 2018 -4566 8 639 2313 132 13 20 chrUextra 7144627 7145447 -21859209 + DMSAT6 Satellite Satellite 1 814 -74 8 639 2147 178 32 81 chrUextra 7145550 7146373 -21858283 + TAHRE LINE telomeric 6 928 -5153 8 639 862 326 12 12 chrUextra 7146882 7147292 -21857364 - MICROPIA_I LTR Gypsy -626 3850 3347 8 639 477 33 0 0 chrUextra 7147396 7147456 -21857200 + ARS406_DM Unknown Unknown 130 189 -164 8 639 3085 201 11 19 chrUextra 7147406 7148205 -21856451 - SAR_DM Satellite Satellite -255 1217 425 8 639 231 62 0 0 chrUextra 7148319 7148351 -21856305 - R1_DM LINE R1 -5302 54 23 8 639 6325 25 1 3 chrUextra 7148372 7149142 -21855514 - R1_DM LINE R1 0 5356 4588 8 639 6702 22 13 1 chrUextra 7149242 7150065 -21854591 + Gypsy2_I LTR Gypsy 2169 3001 -3134 8 639 851 28 0 0 chrUextra 7150166 7150274 -21854382 + NTS_DM Other Other 26 133 -107 8 639 1252 18 0 6 chrUextra 7150274 7150439 -21854217 + NTS_DM Other Other 38 201 -39 8 639 4508 13 2 2 chrUextra 7150449 7150988 -21853668 + DM412B_LTR LTR Gypsy 1 539 -32 8 639 2929 203 17 21 chrUextra 7151088 7151904 -21852752 + SAR_DM Satellite Satellite 418 1230 -242 8 639 3086 184 26 11 chrUextra 7152011 7152803 -21851853 - SAR_DM Satellite Satellite -489 983 180 8 639 832 76 38 0 chrUextra 7152702 7152834 -21851822 + ARS406_DM Unknown Unknown 1 137 -216 8 639 5215 2 2 2 chrUextra 7152934 7153544 -21851112 - Copia_I LTR Copia -3948 645 36 8 639 857 29 0 0 chrUextra 7153654 7153757 -21850899 - PROTOP DNA P -32 4448 4346 8 639 6139 45 6 0 chrUextra 7153857 7154680 -21849976 - IDEFIX_I LTR Gypsy -4524 1104 277 8 639 2655 183 74 15 chrUextra 7154807 7155602 -21849054 + TART LINE telomeric 8950 9650 -4827 8 639 2607 56 56 0 chrUextra 7155703 7156063 -21848593 + G5_DM LINE Jockey 3988 4367 -489 8 639 1830 40 12 8 chrUextra 7156060 7156314 -21848342 + G5_DM LINE Jockey 4602 4856 0 8 639 1292 113 5 5 chrUextra 7156313 7156526 -21848130 - BS2 LINE Jockey -4464 257 45 8 639 3332 29 4 43 chrUextra 7156911 7157376 -21847280 + CIRCE LINE Composite 4981 5427 -929 8 639 2229 28 62 3 chrUextra 7158081 7158372 -21846284 + PROTOP DNA P 1 308 -4172 8 639 580 29 1 0 chrUextra 7158475 7158551 -21846105 + R1_DM LINE R1 3598 3666 -1690 8 639 6071 22 14 0 chrUextra 7158561 7159295 -21845361 + R1_DM LINE R1 4026 4769 -587 8 639 1904 0 0 0 chrUextra 7159395 7159618 -21845038 + Copia_I LTR Copia 4371 4593 0 8 639 2273 7 0 0 chrUextra 7159618 7159894 -21844762 + Copia_LTR LTR Copia 1 276 0 8 639 2153 31 45 0 chrUextra 7159894 7160177 -21844479 + PROTOP DNA P 276 571 -3909 8 639 316 0 0 0 chrUextra 7160318 7160354 -21844302 - Copia_I LTR Copia -4557 36 1 8 639 232 0 0 0 chrUextra 7160354 7160388 -21844268 - Copia_LTR LTR Copia 0 276 243 8 639 2233 14 0 0 chrUextra 7160388 7160664 -21843992 - Copia_LTR LTR Copia 0 276 1 8 639 3859 7 0 0 chrUextra 7160680 7161141 -21843515 + QUASIMODO_LTR LTR Gypsy 1 461 -197 8 639 2167 76 1 50 chrUextra 7161241 7162064 -21842592 + DMSAT6 Satellite Satellite 1 782 -64 8 639 6734 19 5 1 chrUextra 7162164 7162987 -21841669 - R1_DM LINE R1 -876 4480 3655 8 639 4625 41 2 2 chrUextra 7163087 7163678 -21840978 - R1_DM LINE R1 -3992 1364 774 8 639 1571 75 13 0 chrUextra 7163681 7163908 -21840748 - R1_DM LINE R1 -5126 230 1 8 639 3224 194 14 9 chrUextra 7164011 7164817 -21839839 + SAR_DM Satellite Satellite 267 1076 -396 8 639 4310 0 0 0 chrUextra 7164933 7165433 -21839223 + FW_DM LINE Jockey 4193 4692 0 8 639 663 184 47 18 chrUextra 7165424 7165595 -21839061 + TART LINE telomeric 9391 9566 -4911 8 639 752 150 7 20 chrUextra 7165594 7165744 -21838912 + TART LINE telomeric 7123 7270 -7207 8 639 6652 27 1 5 chrUextra 7165856 7166679 -21837977 + R1_DM LINE R1 4194 5013 -343 8 639 4945 33 8 3 chrUextra 7166779 7167395 -21837261 - DMCR1A LINE CR1 -3188 1282 664 8 639 872 39 7 59 chrUextra 7167389 7167524 -21837132 - DMCR1A LINE CR1 -4104 366 239 8 639 572 27 0 0 chrUextra 7167528 7167602 -21837054 - DOC3_DM LINE Jockey -3990 750 677 8 639 3017 184 69 48 chrUextra 7167718 7168517 -21836139 + Gypsy12_LTR LTR Gypsy 1503 2318 -18 8 639 6979 6 5 0 chrUextra 7168625 7169448 -21835208 + FW_DM LINE Jockey 533 1359 -3333 8 639 3113 206 11 20 chrUextra 7169552 7170368 -21834288 - SAR_DM Satellite Satellite -535 808 1 8 639 2123 0 0 0 chrUextra 7170473 7170719 -21833937 + DM297_LTR LTR Gypsy 169 414 0 8 639 1879 79 4 0 chrUextra 7170998 7171263 -21833393 + Baggins1 LINE LOA 4762 5027 -426 8 639 3086 204 8 14 chrUextra 7171394 7172217 -21832439 - SAR_DM Satellite Satellite -542 818 1 8 639 7100 4 1 1 chrUextra 7172317 7173140 -21831516 - TART LINE telomeric -10822 3655 2833 8 639 6300 9 1 32 chrUextra 7173247 7174063 -21830593 - STALKER4_I LTR Gypsy -2952 3578 2788 8 639 2801 24 2 64 chrUextra 7174163 7174570 -21830086 - DM176_I LTR Gypsy -5586 834 453 8 639 1204 20 7 0 chrUextra 7174558 7174706 -21829950 - DM176_I LTR Gypsy -6271 149 1 8 639 1342 78 103 46 chrUextra 7174706 7174986 -21829670 - DM176_LTR LTR Gypsy -27 480 199 8 639 4998 104 40 15 chrUextra 7175102 7175909 -21828747 + Gypsy12_I LTR Gypsy 2351 3177 -2369 8 639 6712 4 17 11 chrUextra 7176011 7176832 -21827824 + MAX_I LTR Pao 840 1665 -6249 8 639 3116 206 20 5 chrUextra 7176932 7177747 -21826909 + SAR_DM Satellite Satellite 250 1076 -396 8 639 1824 5 0 0 chrUextra 7178466 7178676 -21825980 - PROTOP DNA P 0 4480 4271 8 639 21 89 0 0 chrUextra 7179331 7179387 -21825269 + AT_rich Low_complexity Low_complexity 1 56 0 8 639 7128 1 0 1 chrUextra 7179701 7180524 -21824132 - R2_DM LINE R2 -2641 966 145 8 639 2607 210 41 43 chrUextra 7180626 7181447 -21823209 - TAHRE LINE telomeric -2546 7917 7098 8 639 2291 63 0 6 chrUextra 7181547 7181867 -21822789 + R1_DM LINE R1 294 611 -4745 8 639 1660 56 0 0 chrUextra 7181869 7182082 -21822574 + R1_DM LINE R1 1247 1459 -3897 8 639 2283 22 0 0 chrUextra 7182093 7182370 -21822286 + R1_DM LINE R1 1556 1832 -3524 8 639 629 133 0 0 chrUextra 7182470 7182583 -21822073 - ARS406_DM Unknown Unknown -240 113 1 8 639 3304 184 10 12 chrUextra 7182490 7183292 -21821364 + SAR_DM Satellite Satellite 195 994 -478 8 639 976 73 7 18 chrUextra 7183400 7184215 -21820441 + RSP Satellite Satellite 1 806 0 8 639 6618 27 21 0 chrUextra 7184315 7185134 -21819522 + R1_DM LINE R1 3950 4785 -571 8 639 3445 111 70 89 chrUextra 7185241 7186059 -21818597 + PROTOP_B DNA P 304 1105 -48 8 639 3507 174 8 18 chrUextra 7186159 7186961 -21817695 - SAR_DM Satellite Satellite -353 1119 326 8 639 908 80 5 18 chrUextra 7187096 7187903 -21816753 + RSP Satellite Satellite 1 796 0 8 639 2011 141 1 2 chrUextra 7188003 7188520 -21816136 - G_DM LINE Jockey -906 1136 622 8 639 1039 8 0 23 chrUextra 7188510 7188639 -21816017 - BATUMI_I LTR Pao -677 7286 7161 8 639 1434 27 0 5 chrUextra 7188638 7188825 -21815831 - BATUMI_I LTR Pao -424 7539 7354 8 639 4233 19 0 0 chrUextra 7188925 7189442 -21815214 + FW_DM LINE Jockey 2562 3078 -1614 8 639 2635 0 0 0 chrUextra 7189442 7189746 -21814910 + DOC LINE Jockey 11 314 -4411 8 639 1120 7 14 0 chrUextra 7189847 7189986 -21814670 - MICROPIA_LTR LTR Gypsy -335 141 1 8 639 550 0 0 0 chrUextra 7189986 7190050 -21814606 + ACCORD2_I LTR Gypsy 1081 1144 -6068 8 639 228 86 0 0 chrUextra 7190050 7190085 -21814571 + (TAA)n Simple_repeat Simple_repeat 2 36 0 8 639 1551 122 252 21 chrUextra 7190099 7190519 -21814137 + ACCORD2_I LTR Gypsy 1258 1774 -5438 8 639 248 47 432 36 chrUextra 7190533 7190644 -21814012 + ACCORD2_I LTR Gypsy 1556 1710 -5502 8 639 3198 203 11 19 chrUextra 7190781 7191583 -21813073 - SAR_DM Satellite Satellite -535 795 1 8 639 3249 176 37 18 chrUextra 7191691 7192484 -21812172 - SAR_DM Satellite Satellite -480 992 185 8 639 641 182 0 0 chrUextra 7192381 7192513 -21812143 + ARS406_DM Unknown Unknown 1 132 -221 8 639 3251 193 17 16 chrUextra 7192616 7193433 -21811223 + SAR_DM Satellite Satellite 347 1164 -308 8 639 1154 298 85 24 chrUextra 7193543 7194353 -21810303 + HMSBEAGLE_I LTR Gypsy 3434 4270 -2259 8 639 5978 61 23 4 chrUextra 7194457 7195279 -21809377 + Gypsy7_I LTR Gypsy 2754 3591 -1393 8 639 2048 186 10 6 chrUextra 7195384 7196201 -21808455 - SAR_DM Satellite Satellite -535 819 1 8 639 1932 171 7 9 chrUextra 7196301 7197123 -21807533 + SAR_DM Satellite Satellite 1 820 -677 8 639 3390 175 16 13 chrUextra 7198145 7198939 -21805717 - SAR_DM Satellite Satellite -404 1068 272 8 639 3778 23 4 4 chrUextra 7199067 7199543 -21805113 + R1_DM LINE R1 4794 5269 -87 8 639 2570 69 12 0 chrUextra 7199543 7199889 -21804767 + R1_DM LINE R1 1257 1606 -3750 8 639 6818 19 2 1 chrUextra 7199989 7200811 -21803845 - FW_DM LINE Jockey -289 4403 3581 8 639 236 192 0 0 chrUextra 7200938 7200990 -21803666 + DNAREP1_DM LINE Penelope 58 109 -485 8 639 855 143 357 28 chrUextra 7201027 7201329 -21803327 + DNAREP1_DM LINE Penelope 193 592 -2 8 639 4572 54 51 128 chrUextra 7201833 7202655 -21802001 + CIRCE LINE Composite 5177 5935 -421 8 639 6616 26 1 2 chrUextra 7202755 7203577 -21801079 - R1_DM LINE R1 -1200 4156 3336 8 639 248 32 0 0 chrUextra 7203677 7203708 -21800948 + ARS406_DM Unknown Unknown 159 189 -164 8 639 3318 182 15 19 chrUextra 7203684 7204497 -21800159 - SAR_DM Satellite Satellite -281 1191 382 8 639 3960 130 102 0 chrUextra 7204599 7205421 -21799235 - HETA LINE telomeric -2849 3232 2327 8 639 3440 89 2 0 chrUextra 7205521 7206036 -21798620 + S_DM DNA Tc1 1221 1736 0 8 639 1172 106 0 0 chrUextra 7206088 7206267 -21798389 + MAX_I LTR Pao 547 725 -7189 8 639 351 62 125 0 chrUextra 7206279 7206343 -21798313 + MAX_I LTR Pao 824 895 -7019 8 639 3357 8 0 0 chrUextra 7206443 7206831 -21797825 + ROO_LTR LTR Pao 41 428 0 8 639 6220 46 5 2 chrUextra 7207365 7208187 -21796469 - R1_DM LINE R1 -4007 1349 526 8 639 2663 31 0 28 chrUextra 7208287 7208646 -21796010 - ROVER-LTR_DM LTR Gypsy -18 349 1 8 639 352 288 2 2 chrUextra 7208694 7208858 -21795798 - ACCORD2_I LTR Gypsy -1286 5926 5786 8 640 6758 15 19 0 chrUextra 7209209 7210031 -21794625 + DOC2_DM LINE Jockey 1882 2719 -2074 8 640 664 104 0 0 chrUextra 7210131 7210237 -21794419 - ARS406_DM Unknown Unknown -247 106 1 8 640 2972 176 20 14 chrUextra 7210144 7210849 -21793807 + SAR_DM Satellite Satellite 195 903 -569 8 640 657 53 53 0 chrUextra 7210764 7210859 -21793797 - ARS406_DM Unknown Unknown -164 189 90 8 640 613 93 0 0 chrUextra 7210856 7210953 -21793703 - ARS406_DM Unknown Unknown -195 158 62 8 640 739 168 24 24 chrUextra 7211053 7211218 -21793438 + GTWIN_LTR LTR Gypsy 238 402 -93 8 640 3275 59 62 18 chrUextra 7211375 7211874 -21792782 + QUASIMODO_I LTR Gypsy 4249 4769 -1291 8 640 869 157 116 40 chrUextra 7211975 7212200 -21792456 + Gypsy12_LTR LTR Gypsy 1245 1486 -850 8 640 680 145 8 0 chrUextra 7212201 7212318 -21792338 + Gypsy12_LTR LTR Gypsy 2145 2262 -18 8 640 595 244 105 78 chrUextra 7212308 7212566 -21792090 + TAHRE LINE telomeric 9807 10279 -4198 8 640 390 205 0 38 chrUextra 7212549 7212681 -21791975 + TAHRE LINE telomeric 10173 10299 -164 8 640 3278 175 21 25 chrUextra 7212903 7213717 -21790939 + SAR_DM Satellite Satellite 349 1159 -313 8 640 2429 0 0 0 chrUextra 7213819 7214097 -21790559 + ACCORD_LTR LTR Gypsy 281 558 0 8 640 4699 4 0 0 chrUextra 7214097 7214641 -21790015 - BS2 LINE Jockey -1793 2928 2385 8 640 2984 40 5 0 chrUextra 7214832 7215209 -21789447 - STALKER4_LTR LTR Gypsy -23 379 1 8 640 2310 34 37 3 chrUextra 7215209 7215563 -21789093 - STALKER4_I LTR Gypsy 0 6530 6165 8 640 1659 197 8 8 chrUextra 7215663 7216206 -21788450 + BATUMI_I LTR Pao 4118 4736 -3178 8 640 2420 4 0 0 chrUextra 7216205 7216485 -21788171 + BATUMI_I LTR Pao 4900 5179 -2784 8 640 6683 1 1 0 chrUextra 7216585 7217407 -21787249 - TRANSPAC_I LTR Gypsy -353 4237 3415 8 640 960 14 34 20 chrUextra 7217507 7217656 -21787000 + NTS_DM Other Other 90 240 0 8 640 1716 25 17 17 chrUextra 7217656 7217896 -21786760 + NTS_DM Other Other 1 240 0 8 640 1170 43 0 24 chrUextra 7217896 7218062 -21786594 + NTS_DM Other Other 1 162 -78 8 640 396 155 35 12 chrUextra 7218171 7218256 -21786400 + NTS_DM Other Other 4 90 -150 8 640 6897 12 0 0 chrUextra 7218429 7219251 -21785405 + PROTOP DNA P 1910 2731 -1749 8 640 2324 108 41 9 chrUextra 7220273 7221095 -21783561 - DMSAT6 Satellite Satellite -113 848 1 8 640 3198 48 1 14 chrUextra 7221225 7221664 -21782992 - STALKER4_LTR LTR Gypsy -3 399 1 8 640 2713 31 71 0 chrUextra 7221664 7222017 -21782639 + R1_DM LINE R1 4390 4767 -589 8 640 2735 129 75 31 chrUextra 7222128 7222673 -21781983 - Gypsy_I LTR Gypsy -5714 793 225 8 640 2319 4 0 0 chrUextra 7222684 7222938 -21781718 + LINEJ1_DM LINE Jockey 4111 4364 -656 8 640 6799 28 0 16 chrUextra 7223038 7223859 -21780797 - CIRCE LINE Composite -3171 3185 2378 8 640 2588 86 37 38 chrUextra 7223959 7224780 -21779876 - DMSAT6 Satellite Satellite -104 820 1 8 640 697 115 0 0 chrUextra 7224880 7224993 -21779663 - ARS406_DM Unknown Unknown -239 114 2 8 640 3563 186 20 10 chrUextra 7224901 7225700 -21778956 + SAR_DM Satellite Satellite 195 1001 -471 8 640 922 237 4 4 chrUextra 7225801 7226026 -21778630 - ROVER-I_DM LTR Gypsy -4304 2280 2056 8 640 1826 289 5 5 chrUextra 7226030 7226618 -21778038 - ROVER-I_DM LTR Gypsy -4949 1635 1048 8 640 1586 0 0 0 chrUextra 7226722 7226895 -21777761 + DOC LINE Jockey 4139 4311 -414 8 640 5526 14 0 1 chrUextra 7226895 7227543 -21777113 - M4DM DNA Transib 0 1435 789 8 640 3685 10 0 0 chrUextra 7227643 7228059 -21776597 + PROTOP_A DNA P 690 1105 0 8 640 1198 84 12 0 chrUextra 7228059 7228213 -21776443 + DOC3_DM LINE Jockey 1740 1895 -2845 8 640 2146 24 16 0 chrUextra 7228212 7228464 -21776192 + DOC3_DM LINE Jockey 2199 2454 -2286 8 640 1019 115 19 0 chrUextra 7228648 7228805 -21775851 - DNAREP1_DM LINE Penelope -429 165 6 8 640 231 139 0 0 chrUextra 7228812 7228855 -21775801 - DM176_I LTR Gypsy -1654 4766 4724 8 640 254 186 439 8 chrUextra 7228883 7229013 -21775643 + PROTOP DNA P 1 186 -4294 8 640 6432 49 14 6 chrUextra 7229501 7230305 -21774351 + DOC3_DM LINE Jockey 3070 3879 -861 8 640 2963 179 25 4 chrUextra 7230406 7231227 -21773429 - SAR_DM Satellite Satellite -603 838 1 8 640 1858 274 6 6 chrUextra 7231341 7231968 -21772688 - Copia_I LTR Copia -2314 2279 1653 8 640 1843 117 56 2 chrUextra 7232637 7233064 -21771592 + DNAREP1_DM LINE Penelope 3 332 -262 8 640 1810 308 45 5 chrUextra 7233195 7233971 -21770685 + MICROPIA_I LTR Gypsy 2242 3048 -1428 8 640 7469 1 1 1 chrUextra 7234090 7234911 -21769745 + SSU-rRNA_Dme rRNA rRNA 378 1198 -797 8 640 4168 2 0 6 chrUextra 7235014 7235497 -21769159 - QUASIMODO_LTR LTR Gypsy -178 480 1 8 640 408 164 43 73 chrUextra 7235497 7235649 -21769007 + BATUMI_I LTR Pao 623 769 -7194 8 640 847 93 7 21 chrUextra 7235690 7235832 -21768824 + BATUMI_I LTR Pao 749 888 -7075 8 640 3582 171 64 10 chrUextra 7235938 7236747 -21767909 - SAR_DM Satellite Satellite -425 1047 195 8 640 2573 87 19 33 chrUextra 7236853 7237674 -21766982 + DMSAT6 Satellite Satellite 1 809 -82 8 640 3320 201 8 11 chrUextra 7237774 7238566 -21766090 - SAR_DM Satellite Satellite -489 983 195 8 640 742 115 0 8 chrUextra 7238472 7238595 -21766061 + ARS406_DM Unknown Unknown 1 122 -231 8 640 1590 297 10 10 chrUextra 7238695 7239199 -21765457 + Gypsy6_I LTR Gypsy 6508 7011 -1 8 640 1835 78 29 67 chrUextra 7239202 7239516 -21765140 + Gypsy6A_LTR LTR Gypsy 1 302 -118 8 640 246 191 0 0 chrUextra 7239628 7239675 -21764981 - DMCR1A LINE CR1 -3680 790 744 8 640 592 127 36 0 chrUextra 7239742 7239852 -21764804 + DMCR1A LINE CR1 7 120 -4350 8 640 574 137 11 0 chrUextra 7239847 7239942 -21764714 + DMCR1A LINE CR1 365 460 -4010 8 640 3335 31 4 55 chrUextra 7239961 7240437 -21764219 + DOC5_DM LINE Jockey 3979 4430 -252 8 640 2622 82 37 7 chrUextra 7240541 7241356 -21763300 - DMSAT6 Satellite Satellite -251 839 1 8 640 261 75 434 0 chrUextra 7241828 7241881 -21762775 + PROTOP_B DNA P 1 76 -1077 8 640 1710 72 0 0 chrUextra 7241871 7242093 -21762563 + Gypsy12_I LTR Gypsy 2449 2670 -2876 8 640 1304 111 0 26 chrUextra 7242084 7242278 -21762378 + Gypsy12_I LTR Gypsy 2811 2999 -2547 8 640 3557 190 10 11 chrUextra 7242381 7243200 -21761456 + SAR_DM Satellite Satellite 195 1012 -460 8 640 3127 183 61 15 chrUextra 7243300 7244087 -21760569 - SAR_DM Satellite Satellite -459 1013 191 8 640 476 170 0 10 chrUextra 7244017 7244118 -21760538 + ARS406_DM Unknown Unknown 29 128 -225 8 640 6647 27 8 4 chrUextra 7244221 7245042 -21759614 + ROO_I LTR Pao 763 1587 -6669 8 640 2689 176 17 19 chrUextra 7245144 7245959 -21758697 - SAR_DM Satellite Satellite -354 814 1 8 640 2428 7 0 0 chrUextra 7246984 7247274 -21757382 + DOC LINE Jockey 4436 4725 0 8 640 22 0 0 0 chrUextra 7247345 7247367 -21757289 + AT_rich Low_complexity Low_complexity 1 22 0 8 640 210 225 21 53 chrUextra 7247519 7247613 -21757043 + (TTATA)n Simple_repeat Simple_repeat 2 92 0 8 640 192 40 0 0 chrUextra 7248329 7248354 -21756302 + (TTA)n Simple_repeat Simple_repeat 1 25 0 8 640 30 27 0 0 chrUextra 7248471 7248508 -21756148 + AT_rich Low_complexity Low_complexity 1 37 0 8 640 2582 153 17 11 chrUextra 7248826 7249647 -21755009 - SAR_DM Satellite Satellite -554 826 1 8 640 1369 0 0 0 chrUextra 7249747 7249896 -21754760 + BATUMI_I LTR Pao 5167 5315 -2648 8 640 5765 21 1 7 chrUextra 7249894 7250568 -21754088 + BATUMI_I LTR Pao 5672 6341 -1622 8 640 1396 321 58 23 chrUextra 7250673 7251455 -21753201 + MICROPIA_I LTR Gypsy 2014 2822 -1654 8 640 2351 171 45 7 chrUextra 7251589 7252410 -21752246 + SAR_DM Satellite Satellite 1 852 -684 8 640 2616 139 16 156 chrUextra 7252510 7253330 -21751326 - BATUMI_I LTR Pao -6699 1264 560 8 640 4290 0 0 6 chrUextra 7253431 7253949 -21750707 + DOC6_DM LINE Jockey 3708 4222 0 8 640 21 0 0 0 chrUextra 7254230 7254251 -21750405 + AT_rich Low_complexity Low_complexity 1 21 0 8 640 6836 22 17 2 chrUextra 7254352 7255173 -21749483 + DOC2_DM LINE Jockey 1274 2106 -2687 8 640 949 307 47 45 chrUextra 7255297 7256058 -21748598 + BLOOD_I LTR Gypsy 1576 2338 -4275 8 640 21 89 0 0 chrUextra 7256350 7256406 -21748250 + AT_rich Low_complexity Low_complexity 1 56 0 8 640 28 71 0 0 chrUextra 7256632 7256688 -21747968 + AT_rich Low_complexity Low_complexity 1 56 0 8 640 29 47 0 0 chrUextra 7256726 7256769 -21747887 + AT_rich Low_complexity Low_complexity 1 43 0 8 640 28 71 0 0 chrUextra 7256813 7256869 -21747787 + AT_rich Low_complexity Low_complexity 1 56 0 8 640 2114 40 22 11 chrUextra 7257115 7257390 -21747266 - DOC2_DM LINE Jockey -4133 660 383 8 640 1747 288 27 11 chrUextra 7257372 7257931 -21746725 - TOM_I LTR Gypsy -890 5222 4655 8 640 6971 2 52 0 chrUextra 7258036 7258857 -21745799 + DM176_I LTR Gypsy 3015 3878 -2542 8 640 1479 40 0 2 chrUextra 7258957 7259778 -21744878 + (ATAAG)n Simple_repeat Simple_repeat 1 818 0 8 640 5844 71 0 7 chrUextra 7259886 7260698 -21743958 - BATUMI_I LTR Pao -1146 6768 5721 8 640 1875 10 0 0 chrUextra 7260798 7261006 -21743650 + LSU-rRNA_Dme rRNA rRNA 2395 2602 -1298 8 640 5413 2 0 0 chrUextra 7261013 7261618 -21743038 + R1_DM LINE R1 2534 3138 -2218 8 640 775 118 0 0 chrUextra 7261718 7261845 -21742811 - ARS406_DM Unknown Unknown -226 127 1 8 640 3438 180 9 15 chrUextra 7261749 7262537 -21742119 + SAR_DM Satellite Satellite 192 974 -498 8 640 1347 41 0 56 chrUextra 7262638 7262818 -21741838 - PROTOP DNA P -4237 243 74 8 640 5984 72 30 1 chrUextra 7263558 7264378 -21740278 - QUASIMODO_I LTR Gypsy -4754 1306 463 8 640 1494 154 14 21 chrUextra 7264745 7265030 -21739626 - PROTOP_B DNA P -4 1149 867 8 640 1219 33 7 0 chrUextra 7265148 7265298 -21739358 - Gypsy7_I LTR Gypsy -1077 3907 3757 8 640 3707 24 81 0 chrUextra 7265400 7266218 -21738438 - R1_DM LINE R1 -474 4882 3999 8 640 6785 38 8 4 chrUextra 7266318 7267138 -21737518 - Gypsy12_I LTR Gypsy -2772 2774 1951 8 640 7154 12 10 1 chrUextra 7267238 7268058 -21736598 - DOC2_DM LINE Jockey -2013 2780 1954 8 640 2322 11 19 0 chrUextra 7268158 7268421 -21736235 - ACCORD2_I LTR Gypsy -6425 787 520 8 640 3353 13 0 36 chrUextra 7268420 7268833 -21735823 - ACCORD2_I LTR Gypsy -6814 398 1 8 640 1180 21 0 28 chrUextra 7268833 7268978 -21735678 - ACCORD2_LTR LTR Gypsy 0 215 75 8 640 702 186 14 14 chrUextra 7269132 7269279 -21735377 + HETRP_DM Satellite Satellite 1529 1675 -197 8 640 715 179 14 14 chrUextra 7269416 7269563 -21735093 + HETRP_DM Satellite Satellite 1529 1675 -197 8 640 689 206 7 7 chrUextra 7269721 7269868 -21734788 + HETRP_DM Satellite Satellite 1529 1675 -197 8 640 921 28 0 0 chrUextra 7269998 7270104 -21734552 + DOC3_DM LINE Jockey 2592 2697 -2043 8 640 1587 35 5 0 chrUextra 7270102 7270301 -21734355 + DOC3_DM LINE Jockey 4540 4739 -1 8 640 1943 149 77 83 chrUextra 7270262 7270818 -21733838 - Gypsy12A_LTR LTR Gypsy -532 1748 1196 8 640 1285 188 158 21 chrUextra 7270999 7271380 -21733276 - Gypsy12_LTR LTR Gypsy -746 1590 1158 8 640 437 257 27 49 chrUextra 7271392 7271576 -21733080 - Gypsy12_LTR LTR Gypsy -1258 1078 899 8 640 622 289 28 86 chrUextra 7271843 7272445 -21732211 - GTWIN_I LTR Gypsy -2912 3508 3027 8 640 783 37 0 0 chrUextra 7272373 7272480 -21732176 - TLD2 Unknown Unknown 0 218 112 8 640 2406 100 10 48 chrUextra 7272758 7273578 -21731078 - DMSAT6 Satellite Satellite -65 788 1 8 640 913 154 0 17 chrUextra 7274106 7274284 -21730372 + CT-rich Low_complexity Low_complexity 2 176 0 8 640 527 87 0 131 chrUextra 7274295 7274494 -21730162 + CT-rich Low_complexity Low_complexity 2 174 0 8 640 1218 309 47 37 chrUextra 7274736 7275352 -21729304 - DIVER2_I LTR Pao -508 3639 3018 8 640 3561 195 6 8 chrUextra 7275538 7276335 -21728321 - SAR_DM Satellite Satellite -395 1077 282 8 640 599 323 16 13 chrUextra 7276794 7277102 -21727554 - GTWIN_I LTR Gypsy -2298 3562 3256 8 640 1620 6 0 2 chrUextra 7277358 7278178 -21726478 + (TA)n Simple_repeat Simple_repeat 1 817 0 8 640 2396 94 18 44 chrUextra 7279203 7280018 -21724638 - DMSAT6 Satellite Satellite 0 793 1 8 640 3452 56 55 0 chrUextra 7280119 7280694 -21723962 + PROTOP_A DNA P 570 1105 0 8 640 3108 187 14 18 chrUextra 7281038 7281857 -21722799 - SAR_DM Satellite Satellite -549 815 1 8 640 588 324 19 19 chrUextra 7281959 7282439 -21722217 - Gypsy6_I LTR Gypsy -3807 3205 2255 8 640 2996 162 16 10 chrUextra 7282878 7282934 -21721722 + SAR_DM Satellite Satellite 1 65 -1299 8 640 850 60 0 0 chrUextra 7282934 7283051 -21721605 - ARS406_DM Unknown Unknown -164 189 73 8 640 2996 162 16 10 chrUextra 7283051 7283698 -21720958 + SAR_DM Satellite Satellite 66 825 -539 8 640 5921 48 51 5 chrUextra 7283798 7284617 -21720039 - IDEFIX_I LTR Gypsy -3723 1905 1049 8 640 2719 47 35 71 chrUextra 7284780 7285214 -21719442 - MAX_I LTR Pao -7496 418 1 8 640 1723 115 29 0 chrUextra 7285234 7285513 -21719143 - MAX_LTR LTR Pao -34 287 1 8 640 2490 109 6 23 chrUextra 7285640 7286455 -21718201 - DMSAT6 Satellite Satellite -17 800 1 8 640 1687 216 77 54 chrUextra 7286669 7287354 -21717302 + Gypsy12_LTR LTR Gypsy 833 1533 -803 8 640 22 0 0 0 chrUextra 7287816 7287838 -21716818 + AT_rich Low_complexity Low_complexity 1 22 0 8 640 5105 23 2 0 chrUextra 7288398 7289042 -21715614 - STALKER4_I LTR Gypsy -3138 3392 2748 8 640 1344 19 0 0 chrUextra 7289056 7289218 -21715438 + FW_DM LINE Jockey 1 162 -4530 8 640 648 132 0 0 chrUextra 7289324 7289430 -21715226 + ARS406_DM Unknown Unknown 88 193 -160 8 640 1751 124 87 129 chrUextra 7289434 7289999 -21714657 + FB4_DM DNA Tc1 173 713 -3376 8 640 430 82 0 0 chrUextra 7290000 7290061 -21714595 - FB4_DM DNA Tc1 -4027 62 2 8 640 258 98 0 0 chrUextra 7290097 7290138 -21714518 - SAR_DM Satellite Satellite -1018 454 414 8 640 6398 2 110 0 chrUextra 7290238 7291058 -21713598 + NOMAD_I LTR Gypsy 720 1629 -4943 8 640 302 200 0 13 chrUextra 7291158 7291234 -21713422 - ARS406_DM Unknown Unknown -278 75 1 8 640 3241 187 28 6 chrUextra 7291171 7291968 -21712688 + SAR_DM Satellite Satellite 224 1037 -435 8 640 6713 4 11 0 chrUextra 7292078 7292880 -21711776 - Gypsy4_I LTR Gypsy -735 5553 4743 8 640 5083 2 0 5 chrUextra 7292998 7293589 -21711067 - HOBO DNA hAT -2428 588 1 8 640 3206 63 74 0 chrUextra 7293918 7294550 -21710106 + PROTOP_A DNA P 528 1071 -34 8 640 1536 42 0 0 chrUextra 7294548 7294737 -21709919 + PROTOP_B DNA P 938 1121 -32 8 640 2420 218 35 14 chrUextra 7294838 7295658 -21708998 - SAR_DM Satellite Satellite -565 837 1 8 640 6500 18 12 8 chrUextra 7295758 7296563 -21708093 - R1_DM LINE R1 -1092 4264 3456 8 640 278 0 0 0 chrUextra 7296679 7296711 -21707945 - DM1731_LTR LTR Copia -304 32 1 8 640 3722 4 7 11 chrUextra 7296711 7297161 -21707495 - DM1731_I LTR Copia 0 3976 3529 8 640 2896 9 0 0 chrUextra 7297159 7297498 -21707158 - DM1731_I LTR Copia -591 3385 3047 8 640 717 266 92 37 chrUextra 7297598 7298086 -21706570 - QUASIMODO_I LTR Gypsy -19 6041 5527 8 640 2240 60 33 3 chrUextra 7298078 7298411 -21706245 + PROTOP_B DNA P 176 518 -635 8 640 1350 54 0 0 chrUextra 7299084 7299326 -21705330 + (CTTAT)n Simple_repeat Simple_repeat 1 242 0 8 640 3072 193 14 19 chrUextra 7299438 7300258 -21704398 + SAR_DM Satellite Satellite 1 815 -208 8 640 4053 24 129 0 chrUextra 7300358 7301178 -21703478 - R1_DM LINE R1 -1964 3392 2467 8 640 2413 54 15 3 chrUextra 7301278 7301610 -21703046 - TART LINE telomeric -12097 2380 2045 8 640 2652 58 85 0 chrUextra 7301601 7301977 -21702679 - TART LINE telomeric -12618 1859 1452 8 640 649 123 34 26 chrUextra 7301977 7302094 -21702562 - TART_B1 LINE telomeric -6469 4185 4068 8 640 1721 68 0 0 chrUextra 7302198 7302432 -21702224 - G5_DM LINE Jockey -651 4205 3972 8 640 21 0 0 0 chrUextra 7302463 7302484 -21702172 + AT_rich Low_complexity Low_complexity 1 21 0 8 640 69 13 0 0 chrUextra 7302837 7302913 -21701743 + AT_rich Low_complexity Low_complexity 1 76 0 8 640 6511 20 2 15 chrUextra 7303118 7303938 -21700718 - BATUMI_I LTR Pao -6189 1774 965 8 640 1187 58 6 0 chrUextra 7304038 7304210 -21700446 - ARS406_DM Unknown Unknown -180 173 1 8 640 3174 175 9 11 chrUextra 7304117 7304857 -21699799 + SAR_DM Satellite Satellite 195 933 -539 8 640 3411 31 2 0 chrUextra 7304957 7305379 -21699277 - R1_DM LINE R1 -1800 3556 3134 8 640 3382 17 0 2 chrUextra 7305365 7305776 -21698880 - R1_DM LINE R1 -3063 2293 1884 8 640 5219 31 37 5 chrUextra 7305876 7306695 -21697961 + R1_DM LINE R1 3322 4238 -1118 8 640 6871 11 6 0 chrUextra 7306795 7307614 -21697042 + DMRT1A LINE R1 4224 5047 -136 8 640 1639 0 0 5 chrUextra 7308633 7308829 -21695827 - BLOOD_I LTR Gypsy -6418 195 1 8 640 3180 5 45 0 chrUextra 7308829 7309042 -21695614 - BLOOD_LTR LTR Gypsy 0 399 187 8 640 216 0 0 0 chrUextra 7309042 7309066 -21695590 + (GA)n Simple_repeat Simple_repeat 2 25 0 8 640 3180 5 45 0 chrUextra 7309066 7309231 -21695425 - BLOOD_LTR LTR Gypsy -213 186 5 8 640 1620 0 0 0 chrUextra 7309231 7309450 -21695206 + (CACAA)n Simple_repeat Simple_repeat 1 219 0 8 640 6736 15 28 0 chrUextra 7309552 7310371 -21694285 + Copia2_I LTR Copia 969 1810 -2352 8 640 3420 196 6 5 chrUextra 7310471 7311290 -21693366 - SAR_DM Satellite Satellite -397 1075 256 8 640 1575 173 118 28 chrUextra 7311390 7311856 -21692800 - TART LINE telomeric -5047 9430 8531 8 640 22 56 0 0 chrUextra 7312010 7312046 -21692610 + AT_rich Low_complexity Low_complexity 1 36 0 8 640 313 179 51 102 chrUextra 7312091 7312209 -21692447 + Copia_I LTR Copia 4401 4512 -81 8 640 6129 21 22 0 chrUextra 7312309 7313048 -21691608 + R1_DM LINE R1 1670 2425 -2931 8 640 650 13 0 0 chrUextra 7313048 7313125 -21691531 + ACCORD2_LTR LTR Gypsy 1 77 -138 8 640 3353 185 11 9 chrUextra 7313228 7314031 -21690625 + SAR_DM Satellite Satellite 272 1076 -396 8 640 2702 65 0 0 chrUextra 7315066 7315420 -21689236 - G5_DM LINE Jockey -4105 751 398 8 640 1244 97 0 6 chrUextra 7315411 7315588 -21689068 - G5_DM LINE Jockey -4675 181 6 8 640 6429 10 20 1 chrUextra 7315985 7316645 -21688011 - STALKER4_I LTR Gypsy -543 5987 5329 8 640 183 80 0 0 chrUextra 7316645 7316670 -21687986 + (TATG)n Simple_repeat Simple_repeat 4 28 0 8 640 6429 10 20 1 chrUextra 7316670 7316804 -21687852 - STALKER4_I LTR Gypsy -1202 5328 5179 8 640 593 122 9 0 chrUextra 7316904 7317011 -21687645 - ARS406_DM Unknown Unknown -245 108 1 8 640 3500 171 12 11 chrUextra 7316919 7317718 -21686938 + SAR_DM Satellite Satellite 195 994 -478 8 640 2469 83 28 26 chrUextra 7317824 7318624 -21686032 - DMSAT6 Satellite Satellite -98 801 1 8 640 3150 184 14 28 chrUextra 7318744 7319537 -21685119 + SAR_DM Satellite Satellite 391 1172 -300 8 640 6213 42 2 10 chrUextra 7319662 7320480 -21684176 + BATUMI_I LTR Pao 3082 3893 -4070 8 640 1888 83 0 4 chrUextra 7320580 7320847 -21683809 + R1_DM LINE R1 1321 1586 -3770 8 640 2786 27 75 3 chrUextra 7320852 7321399 -21683257 + R1_DM LINE R1 2264 2849 -2507 8 640 3266 217 4 1 chrUextra 7321537 7322318 -21682338 + Stalker2_I LTR Gypsy 5135 5917 -1485 8 640 6340 18 7 4 chrUextra 7322418 7323237 -21681419 - DM176_I LTR Gypsy -5244 1176 355 8 640 5524 21 0 6 chrUextra 7323337 7324010 -21680646 - R1_DM LINE R1 -2687 2669 2001 8 640 921 67 82 0 chrUextra 7324022 7324156 -21680500 - R1_DM LINE R1 -3739 1617 1473 8 640 3370 197 5 9 chrUextra 7324262 7325075 -21679581 + SAR_DM Satellite Satellite 195 1004 -468 8 640 1066 296 29 35 chrUextra 7325177 7325688 -21678968 - FROGGER_I LTR Copia -1150 927 420 8 640 2405 176 20 50 chrUextra 7326094 7326913 -21677743 + SAR_DM Satellite Satellite 1 794 -515 8 640 6287 9 0 42 chrUextra 7327013 7327832 -21676824 - QUASIMODO_I LTR Gypsy -3990 2070 1286 8 640 3369 111 56 35 chrUextra 7328058 7328751 -21675905 - PROTOP_A DNA P 0 1105 398 8 640 932 0 0 9 chrUextra 7328851 7328960 -21675696 + (TTGTG)n Simple_repeat Simple_repeat 3 110 0 8 640 580 83 0 0 chrUextra 7328961 7329069 -21675587 - PROTOP_B DNA P -507 646 539 8 640 1567 63 93 8 chrUextra 7329061 7329318 -21675338 - PROTOP_A DNA P -602 503 225 8 640 224 0 0 162 chrUextra 7329365 7329575 -21675081 + (CTATA)n Simple_repeat Simple_repeat 3 178 0 8 640 6298 32 2 11 chrUextra 7329770 7330589 -21674067 - BATUMI_I LTR Pao -4302 3661 2850 8 640 1657 5 0 0 chrUextra 7330690 7330880 -21673776 - LSU-rRNA_Dme rRNA rRNA -1071 2829 2640 8 640 2081 28 0 0 chrUextra 7330878 7331130 -21673526 - R1_DM LINE R1 0 5356 5105 8 640 3015 40 0 0 chrUextra 7331133 7331508 -21673148 - R1_DM LINE R1 -571 4785 4411 8 640 4382 8 32 5 chrUextra 7331608 7332201 -21672455 + STALKER4_I LTR Gypsy 5922 6530 0 8 640 1957 0 0 0 chrUextra 7332201 7332427 -21672229 + STALKER4_LTR LTR Gypsy 1 226 -176 8 640 2245 4 0 0 chrUextra 7332527 7332784 -21671872 + LSU-rRNA_Dme rRNA rRNA 2393 2649 -1251 8 640 2728 9 0 0 chrUextra 7332786 7333104 -21671552 + R1_DM LINE R1 5039 5356 0 8 640 1971 13 0 0 chrUextra 7333114 7333346 -21671310 + R1_DM LINE R1 5039 5270 -86 8 640 256 138 156 33 chrUextra 7333459 7333549 -21671107 - QUASIMODO_LTR LTR Gypsy -467 191 91 8 640 1688 30 0 0 chrUextra 7333649 7333884 -21670772 - QUASIMODO_I LTR Gypsy -333 5727 5493 8 640 983 68 34 0 chrUextra 7333895 7334042 -21670614 - QUASIMODO_I LTR Gypsy -885 5175 5024 8 640 1699 0 0 0 chrUextra 7334042 7334240 -21670416 - Copia2_LTR_DM LTR Copia 0 198 1 8 640 7225 0 0 0 chrUextra 7334365 7335184 -21669472 + MAX_I LTR Pao 3358 4176 -3738 8 640 6611 18 13 2 chrUextra 7336203 7337022 -21667634 - R1_DM LINE R1 -805 4551 3724 8 640 1855 321 8 10 chrUextra 7337147 7337941 -21666715 - GTWIN_I LTR Gypsy -2646 3775 2984 8 640 1350 314 63 59 chrUextra 7338091 7338857 -21665799 - MICROPIA_I LTR Gypsy -1830 2646 2093 8 640 530 194 97 0 chrUextra 7339073 7339228 -21665428 - ROO_I LTR Pao -1475 6781 6612 8 640 692 149 337 11 chrUextra 7339218 7339402 -21665254 - ROO_I LTR Pao -2771 5485 5242 8 640 345 91 0 0 chrUextra 7339474 7339529 -21665127 - PROTOP_A DNA P -832 273 219 8 640 364 129 14 28 chrUextra 7339921 7339984 -21664672 - DMTOM1_LTR LTR Gypsy 0 410 349 8 9 552 148 40 16 chrUextra 7339984 7340108 -21664548 - DMTOM1_LTR LTR Gypsy 0 410 284 8 641 248 172 17 17 chrUextra 7340125 7340184 -21664472 - DM176_LTR LTR Gypsy -141 366 308 8 641 248 133 22 0 chrUextra 7340303 7340348 -21664308 - DM176_LTR LTR Gypsy -238 269 224 8 641 1662 73 0 16 chrUextra 7340448 7340698 -21663958 - MDG1_I LTR Gypsy -827 5769 5524 8 641 902 301 12 3 chrUextra 7341293 7341616 -21663040 + Invader4_I LTR Gypsy 1 326 -2087 8 641 4080 27 23 2 chrUextra 7341717 7342238 -21662418 - DOC3_DM LINE Jockey -3398 1342 811 8 641 2259 40 63 0 chrUextra 7342236 7342536 -21662120 - DMCR1A LINE CR1 0 4470 4152 8 641 5639 107 0 0 chrUextra 7342636 7343455 -21661201 + Gypsy_I LTR Gypsy 5298 6116 -391 8 641 2287 272 15 15 chrUextra 7343556 7344373 -21660283 - FROGGER_I LTR Copia -86 1991 1175 8 641 3321 10 3 0 chrUextra 7344474 7344863 -21659793 - DIVER_I LTR Pao -5253 390 1 8 641 1851 9 9 0 chrUextra 7344884 7345106 -21659550 - DIVER_LTR LTR Pao 0 224 1 8 641 1620 0 0 0 chrUextra 7345107 7345287 -21659369 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 8 641 6613 27 24 0 chrUextra 7345393 7346212 -21658444 + FW_DM LINE Jockey 127 965 -3727 8 641 3302 166 37 33 chrUextra 7346323 7347131 -21657525 + SAR_DM Satellite Satellite 369 1179 -293 8 641 5515 36 25 18 chrUextra 7347231 7347646 -21657010 + DM176_I LTR Gypsy 85 501 -5919 8 641 181 30 29 57 chrUextra 7347646 7347681 -21656975 + (TAA)n Simple_repeat Simple_repeat 3 36 0 8 641 5515 36 25 18 chrUextra 7347681 7348049 -21656607 + DM176_I LTR Gypsy 502 873 -5547 8 641 3643 37 0 2 chrUextra 7348489 7348950 -21655706 - DMCR1A LINE CR1 0 4470 4011 8 641 4807 0 0 0 chrUextra 7349067 7349614 -21655042 + R2_DM LINE R2 3061 3607 0 8 641 450 0 0 0 chrUextra 7349626 7349677 -21654979 + LSU-rRNA_Dme rRNA rRNA 2582 2632 -1268 8 641 1741 5 10 0 chrUextra 7349677 7349885 -21654771 + R1_DM LINE R1 1 210 -5146 8 641 2501 186 66 45 chrUextra 7349987 7350767 -21653889 - SAR_DM Satellite Satellite -1030 796 1 8 641 579 61 194 0 chrUextra 7350903 7351001 -21653655 + DMRT1C LINE R1 5325 5441 -2 8 641 208 200 31 0 chrUextra 7351971 7352036 -21652620 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 641 22 35 0 0 chrUextra 7352231 7352260 -21652396 + AT_rich Low_complexity Low_complexity 1 29 0 8 641 220 141 46 15 chrUextra 7352547 7352612 -21652044 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 641 3849 5 2 0 chrUextra 7352739 7353184 -21651472 + DIVER_I LTR Pao 5198 5643 0 8 641 1927 5 0 0 chrUextra 7353184 7353408 -21651248 + DIVER_LTR LTR Pao 1 224 0 8 641 232 133 67 0 chrUextra 7353431 7353551 -21651105 + A-rich Low_complexity Low_complexity 5 132 0 8 641 430 257 19 19 chrUextra 7353657 7353812 -21650844 + Copia2_I LTR Copia 3911 4065 -97 8 641 1470 177 33 36 chrUextra 7354108 7354472 -21650184 + STALKER4_I LTR Gypsy 975 1337 -5193 8 641 2013 15 11 15 chrUextra 7354575 7354848 -21649808 - ACCORD2_I LTR Gypsy -5860 1352 1081 8 641 4155 0 0 2 chrUextra 7354848 7355325 -21649331 + MICROPIA_LTR LTR Gypsy 1 476 0 8 641 535 0 29 0 chrUextra 7355325 7355393 -21649263 + MICROPIA_I LTR Gypsy 1 70 -4406 8 641 2703 3 58 3 chrUextra 7355493 7355835 -21648821 - MDG3_I LTR Gypsy -241 4745 4385 8 641 4001 2 2 0 chrUextra 7355833 7356310 -21648346 - MDG3_I LTR Gypsy -528 4458 3981 8 641 1227 201 32 82 chrUextra 7356453 7356470 -21648186 - HETA LINE telomeric -3103 7360 7348 8 641 198 0 0 0 chrUextra 7356470 7356492 -21648164 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 8 641 1895 206 27 80 chrUextra 7356492 7357229 -21647427 - HETA LINE telomeric -2135 3946 3308 8 641 2872 199 27 14 chrUextra 7357329 7358126 -21646530 + SAR_DM Satellite Satellite 1 807 -208 8 641 508 42 56 0 chrUextra 7358247 7358318 -21646338 - DM176_LTR LTR Gypsy -182 325 251 8 641 2146 11 0 80 chrUextra 7358319 7358621 -21646035 - DM176_LTR LTR Gypsy -224 283 6 8 641 34 55 0 0 chrUextra 7358686 7358741 -21645915 + AT_rich Low_complexity Low_complexity 1 55 0 8 641 2228 53 16 0 chrUextra 7358747 7359065 -21645591 + MDG1_I LTR Gypsy 1193 1515 -5081 8 641 1098 15 7 7 chrUextra 7359165 7359302 -21645354 - PROTOP_A DNA P -968 137 1 8 641 4413 78 86 29 chrUextra 7359302 7359983 -21644673 + Gypsy12_I LTR Gypsy 4568 5287 -259 8 641 2330 99 31 22 chrUextra 7360083 7360901 -21643755 + DMSAT6 Satellite Satellite 1 825 -233 8 641 536 200 0 9 chrUextra 7361077 7361193 -21643463 - DNAREP1_DM LINE Penelope -465 129 15 8 641 6380 32 21 5 chrUextra 7361919 7362737 -21641919 - R1_DM LINE R1 -2111 3245 2415 8 641 647 118 8 70 chrUextra 7362837 7362965 -21641691 + IDEFIX_LTR LTR Gypsy 102 221 -373 8 641 27 0 0 0 chrUextra 7363142 7363169 -21641487 + AT_rich Low_complexity Low_complexity 1 27 0 8 641 2265 126 25 0 chrUextra 7363289 7363655 -21641001 + IDEFIX_I LTR Gypsy 1817 2191 -3437 8 641 7134 1 0 0 chrUextra 7363755 7364573 -21640083 - MAX_I LTR Pao -4496 3418 2601 8 641 3158 36 25 23 chrUextra 7364673 7365272 -21639384 + HETRP_DM Satellite Satellite 1 599 -1284 8 641 781 37 0 0 chrUextra 7365384 7365491 -21639165 + HETRP_DM Satellite Satellite 13 119 -1753 8 641 4792 2 0 0 chrUextra 7365591 7366148 -21638508 - FW_DM LINE Jockey -3672 1020 464 8 641 1524 69 20 8 chrUextra 7366160 7366409 -21638247 + DOC2_DM LINE Jockey 747 998 -3795 8 641 926 9 0 0 chrUextra 7366509 7366624 -21638032 - NTS_DM Other Other -88 152 38 8 641 870 9 0 27 chrUextra 7366624 7366736 -21637920 - NTS_DM Other Other -107 133 25 8 641 22 56 0 0 chrUextra 7366762 7366798 -21637858 + AT_rich Low_complexity Low_complexity 1 36 0 8 641 255 125 0 0 chrUextra 7366811 7366851 -21637805 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 641 246 150 0 0 chrUextra 7366894 7366934 -21637722 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 641 246 150 0 0 chrUextra 7366986 7367026 -21637630 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 641 27 29 0 0 chrUextra 7367031 7367065 -21637591 + AT_rich Low_complexity Low_complexity 1 34 0 8 641 1669 0 0 0 chrUextra 7367137 7367327 -21637329 - LSU-rRNA_Dme rRNA rRNA 0 3900 3711 8 641 1074 15 7 22 chrUextra 7367427 7367566 -21637090 - DOC2_DM LINE Jockey -4647 146 10 8 641 4760 18 0 0 chrUextra 7367673 7368245 -21636411 - DOC2_DM LINE Jockey 0 4793 4222 8 641 3117 188 20 25 chrUextra 7368345 7369161 -21635495 - SAR_DM Satellite Satellite -256 1216 405 8 641 551 176 81 51 chrUextra 7370694 7370891 -21633765 + DMCR1A LINE CR1 4227 4429 -41 8 641 727 20 0 20 chrUextra 7370898 7370999 -21633657 - Gypsy12_LTR LTR Gypsy -1400 936 838 8 641 5493 95 29 5 chrUextra 7372017 7372835 -21631821 + Gypsy12_I LTR Gypsy 1399 2236 -3310 8 641 4707 21 0 0 chrUextra 7373855 7374427 -21630229 - PROTOP_A DNA P -533 572 1 8 641 2025 16 0 0 chrUextra 7374427 7374671 -21629985 + R1_DM LINE R1 2540 2783 -2573 8 641 3236 5 0 3 chrUextra 7374771 7375160 -21629496 + FW_DM LINE Jockey 4304 4691 -1 8 641 1525 42 9 32 chrUextra 7375369 7375589 -21629067 - BATUMI_LTR LTR Pao 0 272 58 8 641 3083 22 0 0 chrUextra 7375689 7376060 -21628596 + R1_DM LINE R1 4986 5356 0 8 641 2946 65 10 5 chrUextra 7376093 7376507 -21628149 + R1_DM LINE R1 1 416 -4940 8 641 3454 179 10 12 chrUextra 7376607 7377420 -21627236 + SAR_DM Satellite Satellite 237 1047 -425 8 641 1771 26 18 0 chrUextra 7377525 7377751 -21626905 + DM176_LTR LTR Gypsy 261 490 -17 8 641 1495 167 96 26 chrUextra 7377749 7378343 -21626313 - HETA LINE telomeric -564 5517 5122 8 641 1062 8 0 0 chrUextra 7378443 7378574 -21626082 + G6_DM LINE Jockey 1901 2031 -11 8 641 468 167 0 11 chrUextra 7378592 7378683 -21625973 - HETRP_DM Satellite Satellite -254 1618 1529 8 641 699 179 6 38 chrUextra 7378820 7378977 -21625679 - HETRP_DM Satellite Satellite -203 1669 1518 8 641 622 184 14 14 chrUextra 7379121 7379259 -21625397 - HETRP_DM Satellite Satellite -203 1669 1532 8 641 3184 189 27 18 chrUextra 7379361 7380179 -21624477 - SAR_DM Satellite Satellite -264 1208 384 8 641 2212 112 58 48 chrUextra 7380302 7381097 -21623559 - DMSAT6 Satellite Satellite 0 803 1 8 641 3413 123 37 83 chrUextra 7381197 7382015 -21622641 + PROTOP_B DNA P 296 1075 -78 8 641 893 180 80 90 chrUextra 7382154 7382466 -21622190 - TIRANT_LTR LTR Gypsy -108 309 1 8 641 965 50 0 92 chrUextra 7382740 7382893 -21621763 - Baggins1 LINE LOA 0 5453 5315 8 641 302 50 0 0 chrUextra 7382889 7382929 -21621727 - Baggins1 LINE LOA -456 4997 4958 8 641 2565 16 0 0 chrUextra 7383033 7383341 -21621315 + MDG1_LTR LTR Gypsy 135 442 0 8 641 4365 6 0 0 chrUextra 7383341 7383851 -21620805 - MDG1_I LTR Gypsy -2239 4357 3848 8 641 268 125 0 0 chrUextra 7383951 7383999 -21620657 - ARS406_DM Unknown Unknown -305 48 1 8 641 3586 181 9 9 chrUextra 7383959 7384769 -21619887 + SAR_DM Satellite Satellite 246 1055 -417 8 641 21 0 0 0 chrUextra 7386414 7386435 -21618221 + AT_rich Low_complexity Low_complexity 1 21 0 8 641 244 86 0 0 chrUextra 7386705 7386740 -21617916 + ARS406_DM Unknown Unknown 155 189 -164 8 641 3340 177 11 21 chrUextra 7386726 7387523 -21617133 - SAR_DM Satellite Satellite -291 1181 393 8 641 1291 0 0 6 chrUextra 7387623 7387779 -21616877 + FW_DM LINE Jockey 23 177 -4515 8 641 3085 203 12 20 chrUextra 7388554 7389358 -21615298 + SAR_DM Satellite Satellite 149 946 -526 8 641 3539 179 43 17 chrUextra 7389458 7390275 -21614381 + SAR_DM Satellite Satellite 180 1017 -455 8 641 7145 16 1 2 chrUextra 7390375 7391192 -21613464 + R1_DM LINE R1 3566 4381 -975 8 641 6161 66 9 12 chrUextra 7391292 7392109 -21612547 - R1_DM LINE R1 -4495 861 48 8 641 7376 1 23 1 chrUextra 7392209 7393026 -21611630 + Gypsy6_I LTR Gypsy 1857 2691 -4321 8 641 3250 157 16 11 chrUextra 7393126 7393943 -21610713 + SAR_DM Satellite Satellite 1 821 -434 8 641 4940 14 7 6 chrUextra 7394043 7394856 -21609800 - STALKER4_I LTR Gypsy -4345 2185 1083 8 641 373 299 101 9 chrUextra 7395000 7395213 -21609443 + MICROPIA_I LTR Gypsy 3434 3850 -626 8 641 560 178 339 0 chrUextra 7395322 7395563 -21609093 - PROTOP DNA P -200 4280 3959 8 641 256 172 109 0 chrUextra 7395562 7395626 -21609030 - PROTOP DNA P -3565 915 845 8 641 2152 193 59 24 chrUextra 7395903 7396445 -21608211 - TAHRE LINE telomeric -2859 7604 7044 8 641 830 169 271 19 chrUextra 7396454 7396694 -21607962 - TART LINE telomeric -4301 10176 9900 8 641 397 41 0 0 chrUextra 7396794 7396843 -21607813 - R1_DM LINE R1 -5307 49 1 8 641 6447 22 1 0 chrUextra 7396876 7397611 -21607045 - R1_DM LINE R1 0 5356 4621 8 641 1458 47 0 0 chrUextra 7397711 7397990 -21606666 + (ATAAG)n Simple_repeat Simple_repeat 1 279 0 8 641 3827 178 9 17 chrUextra 7398628 7399444 -21605212 + SAR_DM Satellite Satellite 303 1111 -361 8 641 2694 50 52 3 chrUextra 7399621 7399964 -21604692 + PROTOP DNA P 1 360 -4120 8 641 1332 195 107 11 chrUextra 7400015 7400362 -21604294 + HETA LINE telomeric 4125 4410 -1671 8 641 6972 17 56 0 chrUextra 7401379 7402196 -21602460 - FW_DM LINE Jockey -93 4599 3737 8 641 5424 3 0 0 chrUextra 7402298 7402879 -21601777 - SSU-rRNA_Dme rRNA rRNA -1414 581 1 8 641 32 0 0 0 chrUextra 7403011 7403043 -21601613 + AT_rich Low_complexity Low_complexity 1 32 0 8 641 3561 107 48 5 chrUextra 7403213 7404030 -21600626 - Gypsy12_I LTR Gypsy -866 4680 3770 8 641 2493 107 11 32 chrUextra 7404130 7404944 -21599712 + DMSAT6 Satellite Satellite 1 796 -92 8 641 2666 184 10 10 chrUextra 7405054 7405864 -21598792 - SAR_DM Satellite Satellite -396 810 1 8 641 579 3 127 6 chrUextra 7405974 7406283 -21598373 + (TA)n Simple_repeat Simple_repeat 1 346 0 8 641 875 206 150 38 chrUextra 7406889 7407322 -21597334 + Gypsy12_LTR LTR Gypsy 1267 1727 -553 8 641 335 137 0 0 chrUextra 7407351 7407402 -21597254 + Gypsy12_LTR LTR Gypsy 2286 2336 0 8 641 1952 71 24 31 chrUextra 7407402 7407694 -21596962 + Gypsy12_I LTR Gypsy 1 290 -5256 8 641 6960 20 21 1 chrUextra 7407798 7408615 -21596041 - STALKER4_I LTR Gypsy -1181 5349 4517 8 641 3689 167 16 24 chrUextra 7408720 7409511 -21595145 - SAR_DM Satellite Satellite -362 1110 326 8 641 1055 0 0 0 chrUextra 7409632 7409765 -21594891 + BLOOD_I LTR Gypsy 6481 6613 0 8 641 3761 0 0 0 chrUextra 7409765 7410164 -21594492 + BLOOD_LTR LTR Gypsy 1 399 0 8 641 233 0 0 161 chrUextra 7410169 7410380 -21594276 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 8 641 228 224 0 0 chrUextra 7410382 7410449 -21594207 + (CAAA)n Simple_repeat Simple_repeat 4 70 0 8 641 3211 16 3 0 chrUextra 7410549 7410913 -21593743 + DMCR1A LINE CR1 4106 4470 0 8 641 292 74 93 0 chrUextra 7410916 7410967 -21593689 + I_DM LINE I 5145 5200 -1031 8 641 750 101 0 9 chrUextra 7410967 7411077 -21593579 - PROTOP_A DNA P 0 1105 997 8 641 1565 62 10 0 chrUextra 7411065 7411260 -21593396 + DIVER2_LTR LTR Pao 189 385 0 8 641 910 28 0 0 chrUextra 7411260 7411366 -21593290 + DIVER2_I LTR Pao 1 106 -4041 8 641 419 179 21 10 chrUextra 7411466 7411562 -21593094 + XDMR_DM Unknown Unknown 255 351 -9 8 641 3459 181 34 21 chrUextra 7411486 7412263 -21592393 - SAR_DM Satellite Satellite -354 1118 332 8 641 3575 190 12 11 chrUextra 7412383 7413187 -21591469 - SAR_DM Satellite Satellite -488 984 180 8 641 758 113 0 0 chrUextra 7413085 7413200 -21591456 + ARS406_DM Unknown Unknown 5 119 -234 8 641 6002 73 21 7 chrUextra 7413300 7414117 -21590539 - IDEFIX_I LTR Gypsy -2187 3441 2614 8 641 4288 40 103 0 chrUextra 7414217 7415034 -21589622 + IDEFIX_I LTR Gypsy 1429 2329 -3299 8 641 5975 33 1 0 chrUextra 7415252 7415950 -21588706 + DMCR1A LINE CR1 2096 2794 -1676 8 641 1341 0 0 0 chrUextra 7416050 7416199 -21588457 + (CACAA)n Simple_repeat Simple_repeat 4 152 0 8 641 5969 5 16 0 chrUextra 7416201 7416866 -21587790 + DMRT1B LINE R1 3544 4219 -964 8 641 220 223 0 55 chrUextra 7417149 7417277 -21587379 + T-rich Low_complexity Low_complexity 5 125 0 8 641 180 0 0 0 chrUextra 7417895 7417915 -21586741 + (A)n Simple_repeat Simple_repeat 1 20 0 8 641 6711 20 10 6 chrUextra 7417915 7418698 -21585958 - R1_DM LINE R1 -760 4596 3811 8 641 2661 98 24 33 chrUextra 7418805 7419614 -21585042 + DMSAT6 Satellite Satellite 1 800 0 8 641 226 268 0 0 chrUextra 7420459 7420530 -21584126 - Gypsy7_I LTR Gypsy -4060 924 854 8 641 4776 155 26 2 chrUextra 7420630 7421444 -21583212 + HETA LINE telomeric 1593 2425 -3656 8 641 653 43 49 28 chrUextra 7421548 7421690 -21582966 + (TAA)n Simple_repeat Simple_repeat 3 147 0 8 641 1144 81 19 0 chrUextra 7421693 7421853 -21582803 - Jockey2 LINE Jockey -177 3251 3089 8 641 1488 19 0 0 chrUextra 7421874 7422088 -21582568 + (TAA)n Simple_repeat Simple_repeat 1 214 0 8 641 1739 15 0 0 chrUextra 7422088 7422285 -21582371 + Copia2_LTR_DM LTR Copia 2 198 0 8 641 696 13 0 0 chrUextra 7422285 7422362 -21582294 + Copia2_I LTR Copia 1 77 -4085 8 641 7138 14 44 5 chrUextra 7422462 7423278 -21581378 - R2_DM LINE R2 -2130 1477 630 8 641 34 24 0 0 chrUextra 7423490 7423531 -21581125 + AT_rich Low_complexity Low_complexity 1 41 0 8 641 4536 168 5 6 chrUextra 7424294 7425110 -21579546 - HETA LINE telomeric -2499 3582 2768 8 641 3256 190 16 22 chrUextra 7425210 7425951 -21578705 + SAR_DM Satellite Satellite 430 1166 -306 8 641 489 193 83 8 chrUextra 7425853 7425973 -21578683 - XDMR Unknown Unknown 0 361 233 8 641 413 129 14 0 chrUextra 7425952 7426022 -21578634 - ARS406_DM Unknown Unknown -282 71 1 8 641 6997 27 9 0 chrUextra 7426126 7426942 -21577714 + R1_DM LINE R1 4325 5147 -209 8 641 989 9 0 0 chrUextra 7427042 7427156 -21577500 - R1_DM LINE R1 -1217 4139 4026 8 641 5725 32 63 7 chrUextra 7427158 7427858 -21576798 - R1_DM LINE R1 -1679 3677 2939 8 641 6810 25 2 1 chrUextra 7427958 7428774 -21575882 + PROTOP_A DNA P 150 966 -139 8 641 1964 44 290 0 chrUextra 7428874 7429167 -21575489 + DOC3_DM LINE Jockey 4363 4740 0 8 641 910 102 232 10 chrUextra 7429172 7429379 -21575277 + PROTOP DNA P 416 668 -3812 8 641 354 98 137 32 chrUextra 7429353 7429448 -21575208 - I_DM LINE I -731 5500 5396 8 641 7151 25 0 0 chrUextra 7429790 7430606 -21574050 - R1_DM LINE R1 -2574 2782 1967 8 641 2627 106 37 18 chrUextra 7430706 7431521 -21573135 + DMSAT6 Satellite Satellite 1 829 -18 8 641 6898 33 1 1 chrUextra 7431622 7432437 -21572219 - R1_DM LINE R1 -3813 1543 729 8 641 3497 175 18 23 chrUextra 7432538 7433332 -21571324 + SAR_DM Satellite Satellite 287 1076 -396 8 641 230 146 18 35 chrUextra 7433297 7433354 -21571302 - XDMR_DM Unknown Unknown 0 360 305 8 641 727 301 43 58 chrUextra 7433468 7433884 -21570772 + Gypsy12_I LTR Gypsy 3823 4232 -1314 8 641 6181 24 6 15 chrUextra 7433541 7434269 -21570387 + CIRCE LINE Composite 1884 2604 -3752 8 641 1450 0 0 12 chrUextra 7434370 7434532 -21570124 - Stalker2_I LTR Gypsy -7242 160 1 8 641 3860 5 0 0 chrUextra 7434532 7434956 -21569700 - Stalker2_LTR LTR Gypsy 0 424 1 8 641 1949 9 66 0 chrUextra 7434956 7435184 -21569472 - DMRT1A LINE R1 -1747 3436 3194 8 641 2398 11 7 4 chrUextra 7435286 7435565 -21569091 + LSU-rRNA_Dme rRNA rRNA 1512 1791 -2109 8 641 2036 0 0 0 chrUextra 7435606 7435823 -21568833 + LSU-rRNA_Dme rRNA rRNA 1788 2004 -1896 8 641 2522 4 0 0 chrUextra 7435824 7436102 -21568554 + R2_DM LINE R2 602 879 -2728 8 641 2840 0 0 9 chrUextra 7436202 7436526 -21568130 + BATUMI_I LTR Pao 7643 7963 0 8 641 2327 28 0 27 chrUextra 7436526 7436817 -21567839 + BATUMI_I LTR Pao 7002 7284 -679 8 641 1520 65 5 5 chrUextra 7436817 7437018 -21567638 + BATUMI_I LTR Pao 1 201 -7762 8 641 3370 196 19 25 chrUextra 7437121 7437932 -21566724 - SAR_DM Satellite Satellite -242 1230 425 8 641 4847 19 21 2 chrUextra 7438034 7438597 -21566059 + R1_DM LINE R1 4783 5356 0 8 641 1733 55 9 0 chrUextra 7438630 7438850 -21565806 + R1_DM LINE R1 1 222 -5134 8 641 1773 132 25 0 chrUextra 7438953 7439233 -21565423 - MAX_LTR LTR Pao -34 287 1 8 641 2455 199 6 8 chrUextra 7439233 7439766 -21564890 - SAR_DM Satellite Satellite -484 988 457 8 641 6156 59 7 8 chrUextra 7439867 7440682 -21563974 - BATUMI_I LTR Pao -1164 6750 5694 8 641 320 138 0 49 chrUextra 7441064 7441125 -21563531 - G5A_DM LINE Jockey -49 2792 2735 8 641 551 111 100 0 chrUextra 7441270 7441360 -21563296 + DNAREP1_DM LINE Penelope 496 594 0 8 641 26 50 0 0 chrUextra 7441416 7441456 -21563200 + AT_rich Low_complexity Low_complexity 1 40 0 8 641 3385 166 9 8 chrUextra 7441698 7442501 -21562155 + BATUMI_I LTR Pao 3923 4802 -3112 8 641 2538 0 0 0 chrUextra 7442614 7442894 -21561762 + MAX_I LTR Pao 7635 7914 0 8 641 2932 6 0 0 chrUextra 7442894 7443215 -21561441 + MAX_LTR LTR Pao 1 321 0 8 641 386 240 60 0 chrUextra 7443215 7443304 -21561352 - MICROPIA_I LTR Gypsy -1702 2774 2680 8 641 7664 0 1 0 chrUextra 7443530 7444346 -21560310 + BEL_I LTR Pao 2833 3649 -1755 8 641 7183 21 4 0 chrUextra 7444446 7445262 -21559394 - R1_DM LINE R1 -1581 3775 2957 8 641 4833 6 4 0 chrUextra 7445362 7445890 -21558766 - R1_DM LINE R1 -4826 530 1 8 641 249 35 0 0 chrUextra 7445890 7445919 -21558737 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2604 8 641 2357 0 0 0 chrUextra 7445928 7446178 -21558478 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2404 8 641 4837 0 0 0 chrUextra 7446278 7446798 -21557858 - STALKER4_I LTR Gypsy -2009 4521 4002 8 641 1242 53 11 66 chrUextra 7446913 7447094 -21557562 - BLOOD_LTR LTR Gypsy -141 258 88 8 641 7289 16 1 0 chrUextra 7447194 7448010 -21556646 - R1_DM LINE R1 -3041 2315 1499 8 641 3690 191 9 11 chrUextra 7448111 7448926 -21555730 + SAR_DM Satellite Satellite 243 1055 -417 8 641 1517 154 14 21 chrUextra 7449107 7449392 -21555264 - PROTOP_B DNA P -4 1149 867 8 641 2377 35 10 0 chrUextra 7449510 7449800 -21554856 - Gypsy7_I LTR Gypsy -1077 3907 3615 8 641 255 125 0 0 chrUextra 7449802 7449842 -21554814 - BURDOCK_I LTR Gypsy -2331 3529 3490 8 641 3512 20 5 0 chrUextra 7450858 7451259 -21553397 - PROTOP_B DNA P -750 403 1 8 641 626 213 20 0 chrUextra 7451260 7451410 -21553246 - IDEFIX_I LTR Gypsy -4677 951 799 8 641 708 235 221 0 chrUextra 7451410 7451614 -21553042 - IDEFIX_I LTR Gypsy -5379 249 1 8 641 251 33 0 0 chrUextra 7451644 7451674 -21552982 + NINJA_I LTR Pao 1955 1984 -4027 8 641 2914 55 0 5 chrUextra 7451774 7452159 -21552497 - BATUMI_I LTR Pao -278 7685 7303 8 641 3200 44 10 7 chrUextra 7452182 7452590 -21552066 + BATUMI_I LTR Pao 6427 6835 -1128 8 641 1425 47 0 5 chrUextra 7452690 7452881 -21551775 + FW_DM LINE Jockey 4503 4692 0 8 641 273 29 0 0 chrUextra 7452889 7452923 -21551733 - R1_DM LINE R1 -3966 1390 1357 8 641 4415 32 97 12 chrUextra 7452923 7453500 -21551156 - R1_DM LINE R1 -4150 1206 581 8 641 288 176 0 0 chrUextra 7454527 7454595 -21550061 + (CTATT)n Simple_repeat Simple_repeat 2 69 0 8 641 3377 0 0 0 chrUextra 7454595 7454956 -21549700 + BEL_LTR LTR Pao 1 361 0 8 641 3563 5 0 0 chrUextra 7454956 7455338 -21549318 + BEL_I LTR Pao 1 382 -5022 8 641 200 0 100 0 chrUextra 7456185 7456225 -21548431 + (TA)n Simple_repeat Simple_repeat 1 44 0 8 641 296 109 36 18 chrUextra 7456375 7456431 -21548225 - HETA LINE telomeric -2570 3511 3455 8 641 3873 114 62 27 chrUextra 7456429 7457161 -21547495 - TART LINE telomeric -4425 10052 9296 8 641 3318 196 25 10 chrUextra 7457268 7458082 -21546574 + SAR_DM Satellite Satellite 246 1071 -401 8 641 1245 7 0 0 chrUextra 7458183 7458318 -21546338 - BLASTOPIA_I LTR Gypsy -2264 2217 2083 8 641 6268 4 0 0 chrUextra 7458303 7458998 -21545658 - BLASTOPIA_I LTR Gypsy -3149 1332 638 8 641 5256 23 10 7 chrUextra 7459098 7459705 -21544951 + ACCORD2_I LTR Gypsy 476 1084 -6128 8 641 1825 10 0 5 chrUextra 7459705 7459913 -21544743 - MICROPIA_LTR LTR Gypsy 0 476 270 8 641 227 0 0 0 chrUextra 7460013 7460040 -21544616 + Invader1_I LTR Gypsy 3160 3186 0 8 641 3840 12 2 0 chrUextra 7460040 7460462 -21544194 + Invader1_LTR LTR Gypsy 1 423 0 8 641 1644 118 98 38 chrUextra 7460462 7460828 -21543828 + STALKER4_I LTR Gypsy 884 1271 -5259 8 641 33 105 0 0 chrUextra 7460931 7461055 -21543601 + AT_rich Low_complexity Low_complexity 1 124 0 8 641 267 242 60 18 chrUextra 7461055 7461223 -21543433 + T-rich Low_complexity Low_complexity 3 177 0 8 641 4726 102 134 14 chrUextra 7461849 7462656 -21542000 - TART LINE telomeric -6605 7872 6969 8 641 7183 27 0 4 chrUextra 7462758 7463573 -21541083 - BATUMI_I LTR Pao -2399 5564 4753 8 641 1620 2 0 2 chrUextra 7463673 7463984 -21540672 + (ATCG)n Simple_repeat Simple_repeat 1 310 0 8 641 184 0 143 0 chrUextra 7463984 7464040 -21540616 + (CAGAT)n Simple_repeat Simple_repeat 3 66 0 8 641 1620 1 0 5 chrUextra 7464040 7464324 -21540332 + (ATCG)n Simple_repeat Simple_repeat 1 282 0 8 641 1378 0 0 12 chrUextra 7464324 7464488 -21540168 + (CGAT)n Simple_repeat Simple_repeat 1 162 0 8 641 6619 1 134 0 chrUextra 7464588 7465403 -21539253 - ROO_I LTR Pao -7185 1071 148 8 641 7254 17 1 1 chrUextra 7465505 7466318 -21538338 + DOC2_DM LINE Jockey 3598 4410 -383 8 641 7351 2 1 2 chrUextra 7466418 7467233 -21537423 + LSU-rRNA_Dme rRNA rRNA 534 1347 -2553 8 641 6354 49 60 1 chrUextra 7467333 7468148 -21536508 + R1_DM LINE R1 259 1121 -4235 8 641 3739 0 0 0 chrUextra 7468248 7468648 -21536008 + NOMAD_LTR LTR Gypsy 119 518 0 8 641 1303 11 0 53 chrUextra 7470312 7470502 -21534154 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 641 275 192 0 23 chrUextra 7470504 7470516 -21534140 + polypyrimidine Low_complexity Low_complexity 120 130 0 8 641 1111 45 5 43 chrUextra 7470516 7470703 -21533953 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 641 275 192 0 23 chrUextra 7470703 7470823 -21533833 + CT-rich Low_complexity Low_complexity 1 119 0 8 80 4381 4 44 0 chrUextra 7470993 7471808 -21532848 + Invader2_I LTR Gypsy 767 1617 -2975 8 642 2492 115 9 28 chrUextra 7471908 7472723 -21531933 + DMSAT6 Satellite Satellite 1 798 -108 8 642 1522 34 0 0 chrUextra 7472823 7472999 -21531657 + DOC3_DM LINE Jockey 2126 2301 -2439 8 642 2702 43 21 0 chrUextra 7472985 7473313 -21531343 + DOC3_DM LINE Jockey 2520 2854 -1886 8 642 2627 31 89 0 chrUextra 7473312 7473638 -21531018 + DOC3_DM LINE Jockey 3005 3359 -1381 8 642 760 135 0 0 chrUextra 7473738 7473864 -21530792 - ARS406_DM Unknown Unknown -227 126 1 8 642 3532 184 8 11 chrUextra 7473768 7474553 -21530103 + SAR_DM Satellite Satellite 192 973 -499 8 642 267 338 129 7 chrUextra 7475059 7475345 -21529311 - BLASTOPIA_I LTR Gypsy -1 4480 4160 8 642 1389 0 0 0 chrUextra 7475568 7475717 -21528939 + BEL_I LTR Pao 5256 5404 0 8 642 3377 0 0 0 chrUextra 7475717 7476078 -21528578 + BEL_LTR LTR Pao 1 361 0 8 642 928 62 0 0 chrUextra 7476090 7476203 -21528453 - CIRCE LINE Composite -5271 1085 973 8 642 276 29 0 0 chrUextra 7476346 7476380 -21528276 - CIRCE LINE Composite -5386 970 937 8 642 1578 9 0 0 chrUextra 7477415 7477637 -21527019 + (GAGAA)n Simple_repeat Simple_repeat 1 222 0 8 642 7060 10 17 10 chrUextra 7478325 7479128 -21525528 - CIRCE LINE Composite -1859 4497 3689 8 642 5394 5 0 0 chrUextra 7479228 7479835 -21524821 - Copia_I LTR Copia -479 4114 3508 8 642 1886 0 0 0 chrUextra 7479828 7480043 -21524613 - Copia_I LTR Copia -1748 2845 2631 8 642 3904 0 0 12 chrUextra 7480143 7480567 -21524089 + HOBO DNA hAT 2598 3016 0 8 642 3371 197 14 21 chrUextra 7481058 7481873 -21522783 - SAR_DM Satellite Satellite -292 1180 372 8 642 7292 17 1 0 chrUextra 7481973 7482788 -21521868 - Copia2_I LTR Copia -2160 2002 1187 8 642 3482 188 14 20 chrUextra 7482891 7483703 -21520953 + SAR_DM Satellite Satellite 399 1205 -267 8 642 1987 181 8 8 chrUextra 7483815 7484204 -21520452 + SAR_DM Satellite Satellite 1 743 -607 8 642 870 229 16 103 chrUextra 7484204 7484583 -21520073 - XDMR_DM Unknown Unknown -9 351 6 8 642 1987 181 8 8 chrUextra 7484583 7484607 -21520049 + SAR_DM Satellite Satellite 744 792 -558 8 642 4237 2 0 0 chrUextra 7484718 7485173 -21519483 - R2_DM LINE R2 -3003 604 150 8 642 3354 11 0 25 chrUextra 7485140 7485533 -21519123 - LSU-rRNA_Dme rRNA rRNA -1294 2606 2224 8 642 323 111 0 0 chrUextra 7486548 7486593 -21518063 - Baggins1 LINE LOA -647 4806 4762 8 642 3194 44 60 48 chrUextra 7486874 7487363 -21517293 + DM176_LTR LTR Gypsy 1 481 -26 8 642 2198 33 72 43 chrUextra 7487463 7487809 -21516847 + PROTOP_B DNA P 581 936 -217 8 642 301 50 0 0 chrUextra 7487802 7487862 -21516794 + PROTOP_B DNA P 572 631 -522 8 642 2440 51 13 0 chrUextra 7487867 7488180 -21516476 + PROTOP_B DNA P 794 1110 -43 8 642 403 148 267 0 chrUextra 7488177 7488278 -21516378 - DMCR1A LINE CR1 -1125 3345 3218 8 642 3133 205 29 22 chrUextra 7488378 7489185 -21515471 + SAR_DM Satellite Satellite 445 1256 -216 8 642 42 57 0 0 chrUextra 7489333 7489403 -21515253 + AT_rich Low_complexity Low_complexity 1 70 0 8 642 346 166 203 79 chrUextra 7489521 7489698 -21514958 + DNAREP1_DM LINE Penelope 16 214 -380 8 642 891 171 67 11 chrUextra 7489682 7489896 -21514760 - DNAREP1_DM LINE Penelope -262 332 117 8 642 1094 129 31 0 chrUextra 7489912 7490102 -21514554 - DNAREP1_DM LINE Penelope -267 327 6 8 642 1939 118 10 7 chrUextra 7490208 7490506 -21514150 - TART LINE telomeric -7445 7032 6734 8 642 810 262 66 38 chrUextra 7490534 7490946 -21513710 - TART LINE telomeric -1171 13306 13083 8 642 407 75 0 0 chrUextra 7490966 7491023 -21513633 - TART LINE telomeric -10448 4029 3980 8 642 4317 99 77 52 chrUextra 7491128 7491893 -21512763 - Gypsy12_I LTR Gypsy -4762 784 1 8 642 6902 17 32 1 chrUextra 7492038 7492853 -21511803 + STALKER4_I LTR Gypsy 2161 3000 -3530 8 642 363 31 115 10 chrUextra 7492962 7493058 -21511598 + (TATAA)n Simple_repeat Simple_repeat 2 107 0 8 642 472 168 297 30 chrUextra 7493120 7493344 -21511312 - DNAREP1_DM LINE Penelope -251 343 60 8 642 2009 38 4 0 chrUextra 7493347 7493583 -21511073 + Gypsy6A_LTR LTR Gypsy 3 239 -181 8 642 245 132 0 0 chrUextra 7493582 7493620 -21511036 + Gypsy6A_LTR LTR Gypsy 371 408 -12 8 642 1318 14 0 0 chrUextra 7493620 7493768 -21510888 + Gypsy12_LTR LTR Gypsy 1 148 -2188 8 642 3612 5 2 0 chrUextra 7493868 7494261 -21510395 - DIVER_I LTR Pao -5162 481 88 8 642 1750 5 0 0 chrUextra 7494264 7494457 -21510199 - DIVER_LTR LTR Pao -31 193 1 8 642 1620 0 0 0 chrUextra 7494459 7494683 -21509973 + (TTATA)n Simple_repeat Simple_repeat 1 224 0 8 642 2743 89 45 6 chrUextra 7494783 7495598 -21509058 - DMSAT6 Satellite Satellite -74 847 1 8 642 508 0 0 19 chrUextra 7495698 7495804 -21508852 - NOMAD_I LTR Gypsy -755 5817 5714 8 642 530 128 11 0 chrUextra 7495778 7495872 -21508784 - NOMAD_I LTR Gypsy -969 5603 5509 8 642 5987 5 1 5 chrUextra 7495844 7496512 -21508144 - NOMAD_I LTR Gypsy -5706 866 201 8 642 2021 79 4 0 chrUextra 7496889 7497154 -21507502 + Baggins1 LINE LOA 4762 5027 -426 8 642 3277 92 5 36 chrUextra 7497526 7498338 -21506318 - Gypsy12_I LTR Gypsy -4580 966 122 8 642 315 185 250 42 chrUextra 7499415 7499511 -21505145 + HETRP_DM Satellite Satellite 1519 1634 -238 8 642 855 176 12 29 chrUextra 7499559 7499729 -21504927 + HETRP_DM Satellite Satellite 1516 1682 -190 8 642 243 208 0 19 chrUextra 7499772 7499826 -21504830 + HETRP_DM Satellite Satellite 1580 1632 -240 8 642 315 185 250 42 chrUextra 7499873 7499969 -21504687 + HETRP_DM Satellite Satellite 1519 1634 -238 8 642 692 172 20 20 chrUextra 7500017 7500165 -21504491 + HETRP_DM Satellite Satellite 1516 1663 -209 8 642 822 111 8 15 chrUextra 7500309 7500819 -21503837 + RSP Satellite Satellite 1 506 0 8 642 815 79 0 9 chrUextra 7500859 7501082 -21503574 + RSP Satellite Satellite 1 221 0 8 642 3417 184 6 16 chrUextra 7501183 7501996 -21502660 - SAR_DM Satellite Satellite -365 1107 303 8 642 1900 193 12 14 chrUextra 7502096 7502891 -21501765 + SAR_DM Satellite Satellite 1 794 -645 8 642 5295 34 36 0 chrUextra 7503010 7503684 -21500972 - FW_DM LINE Jockey -3674 1018 321 8 642 1035 35 14 0 chrUextra 7503679 7503824 -21500832 - G_DM LINE Jockey 0 4346 4200 8 642 1522 6 0 0 chrUextra 7503924 7504106 -21500550 + NOMAD_I LTR Gypsy 912 1093 -5479 8 642 5072 20 0 3 chrUextra 7504101 7504738 -21499918 + NOMAD_I LTR Gypsy 5499 6133 -439 8 642 23 0 0 0 chrUextra 7505435 7505458 -21499198 + AT_rich Low_complexity Low_complexity 1 23 0 8 642 6719 23 0 0 chrUextra 7505752 7506566 -21498090 + R1_DM LINE R1 3838 4651 -705 8 642 246 150 0 0 chrUextra 7506823 7506863 -21497793 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 642 3842 2 0 0 chrUextra 7506915 7507357 -21497299 + LSU-rRNA_Dme rRNA rRNA 2191 2632 -1268 8 642 1011 8 8 0 chrUextra 7507357 7507480 -21497176 + R1_DM LINE R1 1 124 -5232 8 642 5640 6 0 0 chrUextra 7507584 7508242 -21496414 - QUASIMODO_LTR LTR Gypsy 0 658 1 8 642 487 147 25 49 chrUextra 7508270 7508392 -21496264 + Gypsy12A_LTR LTR Gypsy 1613 1731 -549 8 642 2986 22 149 2 chrUextra 7508494 7509308 -21495348 - R1_DM LINE R1 -1253 4103 3171 8 642 6699 10 17 9 chrUextra 7509408 7510222 -21494434 + CIRCE LINE Composite 3523 4343 -2013 8 642 1442 114 83 47 chrUextra 7510337 7510712 -21493944 + BATUMI_I LTR Pao 292 680 -7283 8 642 3413 31 5 2 chrUextra 7510712 7511136 -21493520 - Gypsy_LTR LTR Gypsy 0 482 58 8 642 6219 30 53 5 chrUextra 7511236 7512050 -21492606 + Gypsy4_I LTR Gypsy 1425 2277 -4011 8 642 1934 62 83 37 chrUextra 7512150 7512498 -21492158 + DM176_LTR LTR Gypsy 132 481 -26 8 642 3005 16 0 3 chrUextra 7512506 7512874 -21491782 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 642 750 11 0 0 chrUextra 7512874 7512964 -21491692 - ROVER-I_DM LTR Gypsy 0 6584 6495 8 642 286 50 0 0 chrUextra 7513073 7513133 -21491523 + PROTOP_B DNA P 572 631 -522 8 642 2281 58 13 0 chrUextra 7513138 7513451 -21491205 + PROTOP_B DNA P 794 1110 -43 8 642 977 147 182 4 chrUextra 7513448 7513673 -21490983 - DMCR1A LINE CR1 -1125 3345 3081 8 642 571 137 178 8 chrUextra 7513760 7513878 -21490778 + DMLTR5 LTR Gypsy 40 177 -89 8 642 3227 46 0 0 chrUextra 7514036 7514453 -21490203 - PROTOP_A DNA P -688 417 1 8 642 839 228 91 13 chrUextra 7514453 7514684 -21489972 - TOM_I LTR Gypsy -2137 3975 3727 8 642 6656 28 0 0 chrUextra 7514892 7515706 -21488950 + R1_DM LINE R1 2100 2913 -2443 8 642 2821 3 0 0 chrUextra 7515806 7516138 -21488518 - ACCORD_LTR LTR Gypsy -226 332 1 8 642 715 41 20 10 chrUextra 7516138 7516236 -21488420 + TART LINE telomeric 7900 7998 -6479 8 642 2241 103 101 23 chrUextra 7516224 7516620 -21488036 + TART LINE telomeric 3597 4023 -10454 8 642 1881 175 9 5 chrUextra 7516720 7517521 -21487135 + SAR_DM Satellite Satellite 1 804 -585 8 642 518 108 81 0 chrUextra 7517650 7517761 -21486895 + TART LINE telomeric 10370 10489 -3988 8 642 34 24 0 0 chrUextra 7517774 7517815 -21486841 + AT_rich Low_complexity Low_complexity 1 41 0 8 642 6768 20 0 0 chrUextra 7518548 7519362 -21485294 - DMRT1A LINE R1 -2383 2800 1987 8 642 6136 44 6 1 chrUextra 7519462 7520276 -21484380 - HETA LINE telomeric -1201 4880 4063 8 642 4447 21 86 2 chrUextra 7520376 7521190 -21483466 - R1_DM LINE R1 -1374 3982 3101 8 642 3138 186 21 21 chrUextra 7521296 7522101 -21482555 - SAR_DM Satellite Satellite -242 1230 426 8 642 6724 10 7 7 chrUextra 7522204 7523018 -21481638 + CIRCE LINE Composite 2168 2981 -3375 8 642 932 297 39 34 chrUextra 7523258 7523899 -21480757 + BLOOD_I LTR Gypsy 1822 2465 -4148 8 642 331 93 19 0 chrUextra 7524091 7524145 -21480511 - ROVER-I_DM LTR Gypsy -6529 55 1 8 642 1870 89 45 64 chrUextra 7524145 7524519 -21480137 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 642 2756 12 0 3 chrUextra 7524519 7524846 -21479810 - CIRCE LINE Composite -1983 4373 4048 8 642 2068 0 4 0 chrUextra 7524946 7525192 -21479464 - NOMAD_LTR LTR Gypsy -271 247 1 8 642 551 6 128 6 chrUextra 7525192 7525505 -21479151 + (TA)n Simple_repeat Simple_repeat 1 350 0 8 642 2139 8 0 4 chrUextra 7525505 7525760 -21478896 + T412LTR LTR LTR 1 254 -227 8 642 5645 97 15 0 chrUextra 7525860 7526674 -21477982 + Gypsy12_I LTR Gypsy 2388 3213 -2333 8 642 2422 111 120 7 chrUextra 7526776 7527217 -21477439 + TART LINE telomeric 7311 7726 -6751 8 642 2003 91 173 35 chrUextra 7527213 7527588 -21477068 + TAHRE LINE telomeric 10013 10439 -24 8 642 3350 163 8 8 chrUextra 7527694 7528399 -21476257 + SAR_DM Satellite Satellite 369 1073 -399 8 642 389 166 0 13 chrUextra 7528419 7528502 -21476154 + SAR_DM Satellite Satellite 974 1046 -426 8 642 685 204 73 52 chrUextra 7529163 7529411 -21475245 - TAHRE LINE telomeric -780 9683 9431 8 642 2368 107 23 16 chrUextra 7530430 7531244 -21473412 + DMSAT6 Satellite Satellite 1 820 -108 8 642 4469 21 70 6 chrUextra 7531344 7532158 -21472498 + R1_DM LINE R1 3492 4357 -999 8 642 2283 0 0 0 chrUextra 7532258 7532530 -21472126 - DOC LINE Jockey -3829 896 625 8 642 3294 81 0 56 chrUextra 7532536 7533071 -21471585 - Gypsy7_I LTR Gypsy -2064 2920 2416 8 642 6745 17 1 1 chrUextra 7534084 7534897 -21469759 - R1_DM LINE R1 -763 4593 3781 8 642 1049 183 28 10 chrUextra 7535940 7536714 -21467942 - SAR_DM Satellite Satellite -680 787 1 8 642 6515 11 60 0 chrUextra 7536823 7537636 -21467020 - STALKER4_I LTR Gypsy -1324 5206 4345 8 642 933 34 0 0 chrUextra 7538431 7538548 -21466108 + (TATTG)n Simple_repeat Simple_repeat 5 121 0 8 642 3382 185 16 10 chrUextra 7538649 7539460 -21465196 + SAR_DM Satellite Satellite 1 816 -396 8 642 2274 171 8 5 chrUextra 7539562 7540375 -21464281 + SAR_DM Satellite Satellite 1 815 -545 8 642 5603 14 1 0 chrUextra 7540475 7541144 -21463512 + Invader1_I LTR Gypsy 2517 3186 0 8 642 1237 7 0 0 chrUextra 7541144 7541288 -21463368 + Invader1_LTR LTR Gypsy 1 144 -279 8 642 5927 20 4 9 chrUextra 7541388 7542153 -21462503 - STALKER4_I LTR Gypsy -4706 1824 1064 8 642 1087 22 7 0 chrUextra 7542301 7542437 -21462219 - FW_DM LINE Jockey -4555 137 1 8 642 5482 27 5 0 chrUextra 7542444 7543114 -21461542 + R1_DM LINE R1 1397 2069 -3287 8 642 2034 200 34 7 chrUextra 7543214 7544027 -21460629 + SAR_DM Satellite Satellite 1 835 -590 8 642 1550 296 51 53 chrUextra 7544130 7544939 -21459717 - MICROPIA_I LTR Gypsy -2004 2472 1666 8 642 22 56 0 0 chrUextra 7545438 7545474 -21459182 + AT_rich Low_complexity Low_complexity 1 36 0 8 642 2523 170 12 11 chrUextra 7545954 7546763 -21457893 - SAR_DM Satellite Satellite -439 809 1 8 642 6531 38 0 4 chrUextra 7546866 7547679 -21456977 - BATUMI_I LTR Pao -2264 5699 4890 8 642 388 257 375 10 chrUextra 7547786 7547994 -21456662 + MICROPIA_I LTR Gypsy 1396 1679 -2797 8 642 4723 40 2 0 chrUextra 7547997 7548592 -21456064 - DMCR1A LINE CR1 0 4470 3875 8 642 2457 186 66 40 chrUextra 7548692 7549501 -21455155 + TAHRE LINE telomeric 9102 9833 -630 8 642 1215 14 0 0 chrUextra 7549605 7549752 -21454904 - NTS_DM Other Other -93 147 1 8 642 1836 8 17 13 chrUextra 7549752 7549991 -21454665 - NTS_DM Other Other 0 240 1 8 642 1835 4 17 13 chrUextra 7549991 7550230 -21454426 - NTS_DM Other Other 0 240 1 8 642 1163 49 21 27 chrUextra 7550230 7550418 -21454238 - NTS_DM Other Other 0 240 54 8 642 5111 51 46 9 chrUextra 7550544 7551331 -21453325 - DM297_I LTR Gypsy 0 6167 5352 8 642 2409 101 5 53 chrUextra 7551431 7551827 -21452829 + Gypsy12_LTR LTR Gypsy 1937 2313 -23 8 642 682 198 199 58 chrUextra 7551822 7552238 -21452418 + TAHRE LINE telomeric 10015 10489 -3988 8 642 294 260 101 24 chrUextra 7552504 7552796 -21451860 + TART LINE telomeric 10958 11056 -3421 8 642 2239 197 10 12 chrUextra 7553494 7554070 -21450586 + SAR_DM Satellite Satellite 482 1056 -416 8 642 5540 95 1 1 chrUextra 7554171 7554983 -21449673 - S_DM DNA Tc1 -549 1187 376 8 642 4917 81 3 8 chrUextra 7555092 7555896 -21448760 + G_DM LINE Jockey 757 1551 -491 8 642 3220 191 17 21 chrUextra 7555996 7556802 -21447854 + SAR_DM Satellite Satellite 1 803 -226 8 642 6576 14 1 2 chrUextra 7556912 7557722 -21446934 - STALKER4_I LTR Gypsy -4542 1988 1180 8 642 598 11 0 132 chrUextra 7558431 7558635 -21446021 + (CAAAAA)n Simple_repeat Simple_repeat 3 179 0 8 642 7018 0 0 0 chrUextra 7558735 7559548 -21445108 + DOC LINE Jockey 289 1101 -3624 8 642 1579 318 10 6 chrUextra 7559649 7560276 -21444380 + HMSBEAGLE_I LTR Gypsy 1452 2080 -4449 8 642 27 29 0 0 chrUextra 7560673 7560707 -21443949 + AT_rich Low_complexity Low_complexity 1 34 0 8 642 250 33 0 0 chrUextra 7560946 7560976 -21443680 + Baggins1 LINE LOA 4727 4756 -697 8 642 664 73 324 0 chrUextra 7560984 7561120 -21443536 - FB4_DM DNA Tc1 -3907 182 3 8 642 1715 84 35 23 chrUextra 7561474 7561813 -21442843 - Gypsy6A_LTR LTR Gypsy -77 343 1 8 642 757 109 0 0 chrUextra 7561813 7561932 -21442724 - NTS_DM Other Other -115 125 7 8 642 261 125 21 0 chrUextra 7562026 7562074 -21442582 - NTS_DM Other Other -191 49 1 8 642 566 115 106 29 chrUextra 7562074 7562244 -21442412 - NTS_DM Other Other 0 240 58 8 642 471 15 0 29 chrUextra 7562387 7562456 -21442200 + BATUMI_I LTR Pao 7895 7961 -2 8 642 2214 17 0 30 chrUextra 7562458 7562753 -21441903 + BATUMI_I LTR Pao 6999 7284 -679 8 642 48 0 0 0 chrUextra 7564439 7564487 -21440169 + AT_rich Low_complexity Low_complexity 1 48 0 8 642 1620 23 27 5 chrUextra 7565126 7565782 -21438874 + (AGATG)n Simple_repeat Simple_repeat 1 670 0 8 642 987 89 0 0 chrUextra 7565782 7565939 -21438717 + (ACATG)n Simple_repeat Simple_repeat 5 161 0 8 642 3386 174 15 16 chrUextra 7566050 7566844 -21437812 + SAR_DM Satellite Satellite 326 1118 -354 8 642 3251 193 14 18 chrUextra 7566952 7567765 -21436891 - SAR_DM Satellite Satellite -545 809 1 8 642 4661 62 20 3 chrUextra 7567865 7568514 -21436142 - QUASIMODO_I LTR Gypsy -5371 689 30 8 642 1341 6 0 0 chrUextra 7568521 7568678 -21435978 - QUASIMODO_LTR LTR Gypsy -51 607 451 8 642 1601 11 0 0 chrUextra 7568778 7568969 -21435687 + DOC5_DM LINE Jockey 4461 4651 -31 8 642 260 0 57 0 chrUextra 7568969 7569004 -21435652 + (TATAA)n Simple_repeat Simple_repeat 5 41 0 8 642 3313 180 14 15 chrUextra 7569706 7570501 -21434155 + SAR_DM Satellite Satellite 326 1119 -353 8 642 3738 5 0 2 chrUextra 7570605 7571042 -21433614 - FW_DM LINE Jockey -806 3886 3451 8 642 3204 28 2 2 chrUextra 7572430 7572824 -21431832 - ROO_LTR LTR Pao -34 394 1 8 642 3503 5 0 0 chrUextra 7572824 7573243 -21431413 + LSU-rRNA_Dme rRNA rRNA 557 975 -2925 8 642 2407 137 111 36 chrUextra 7573345 7574149 -21430507 - TART LINE telomeric -6799 7678 7200 8 642 2424 3 0 7 chrUextra 7574256 7574548 -21430108 + BATUMI_I LTR Pao 7674 7963 0 8 642 1959 50 3 88 chrUextra 7574548 7574873 -21429783 + BATUMI_I LTR Pao 7002 7298 -665 8 642 1004 132 10 24 chrUextra 7574860 7575069 -21429587 + TAHRE LINE telomeric 10218 10423 -40 8 642 3353 181 8 14 chrUextra 7575176 7575981 -21428675 + SAR_DM Satellite Satellite 195 994 -478 8 642 6834 10 14 2 chrUextra 7576082 7576895 -21427761 + CIRCE LINE Composite 3655 4476 -1880 8 642 518 16 0 0 chrUextra 7576995 7577059 -21427597 - R1_DM LINE R1 -2899 2457 2394 8 642 6040 34 1 0 chrUextra 7577061 7577808 -21426848 - R1_DM LINE R1 -3291 2065 1318 8 642 6904 16 4 0 chrUextra 7577908 7578720 -21425936 - R2_DM LINE R2 -1759 1848 1034 8 642 2345 99 18 50 chrUextra 7578820 7579621 -21425035 - DMSAT6 Satellite Satellite -3 775 1 8 642 3781 73 10 2 chrUextra 7580644 7581152 -21423504 + Gypsy12_I LTR Gypsy 5035 5546 0 8 642 1465 171 13 27 chrUextra 7581152 7581453 -21423203 + Gypsy12_LTR LTR Gypsy 1 297 -2039 8 642 2049 55 24 3 chrUextra 7581556 7581848 -21422808 - TART LINE telomeric -12135 2342 2045 8 642 2802 62 54 0 chrUextra 7581839 7582226 -21422430 - TART LINE telomeric -12618 1859 1452 8 642 633 115 43 26 chrUextra 7582226 7582342 -21422314 - TART_B1 LINE telomeric -6469 4185 4068 8 642 2047 4 4 4 chrUextra 7582468 7582712 -21421944 - BEL_LTR LTR Pao -117 244 1 8 642 4651 3 0 0 chrUextra 7582712 7583280 -21421376 - TRANSPAC_I LTR Gypsy -345 4245 3678 8 642 2557 98 2 10 chrUextra 7584294 7584697 -21419959 + HETA LINE telomeric 2788 3187 -2894 8 642 952 163 63 18 chrUextra 7584819 7585101 -21419555 + TART LINE telomeric 9364 9646 -4831 8 642 1573 135 188 0 chrUextra 7585205 7585524 -21419132 - DOC LINE Jockey -1541 3184 2806 8 642 1741 86 299 49 chrUextra 7585521 7586015 -21418641 - DOC LINE Jockey -2108 2617 2001 8 642 3318 178 10 11 chrUextra 7586119 7586904 -21417752 + SAR_DM Satellite Satellite 293 1076 -396 8 642 3315 179 15 16 chrUextra 7587028 7587827 -21416829 + SAR_DM Satellite Satellite 304 1101 -371 8 642 503 243 7 7 chrUextra 7587943 7588096 -21416560 + IDEFIX_I LTR Gypsy 365 517 -5111 8 642 831 256 169 6 chrUextra 7588126 7588452 -21416204 + IDEFIX_I LTR Gypsy 676 1054 -4574 8 642 615 0 0 0 chrUextra 7588469 7588540 -21416116 + DOC3_DM LINE Jockey 1 71 -4669 8 642 1636 42 0 0 chrUextra 7588538 7588752 -21415904 + DOC3_DM LINE Jockey 643 856 -3884 8 642 1197 0 0 0 chrUextra 7588852 7588998 -21415658 - QUASIMODO_LTR LTR Gypsy -512 146 1 8 642 51 31 0 0 chrUextra 7588998 7589063 -21415593 + AT_rich Low_complexity Low_complexity 1 65 0 8 642 345 91 0 0 chrUextra 7589383 7589438 -21415218 + PROTOP_A DNA P 219 273 -832 8 642 1413 34 0 0 chrUextra 7589489 7589664 -21414992 - QUASIMODO_I LTR Gypsy -5513 547 373 8 642 995 108 19 0 chrUextra 7590148 7590305 -21414351 + DNAREP1_DM LINE Penelope 6 165 -429 8 642 589 143 115 19 chrUextra 7590361 7590518 -21414138 + DNAREP1_DM LINE Penelope 120 291 -303 8 642 1532 220 146 68 chrUextra 7590676 7591437 -21413219 - Gypsy12_LTR LTR Gypsy -838 1498 679 8 642 1577 40 0 0 chrUextra 7591588 7591787 -21412869 - FW_DM LINE Jockey -4493 199 1 8 642 4821 30 18 2 chrUextra 7591795 7592400 -21412256 + R1_DM LINE R1 1377 1991 -3365 8 642 2403 30 20 0 chrUextra 7593412 7593714 -21410942 - CIRCE LINE Composite -6048 308 1 8 642 961 68 0 0 chrUextra 7593714 7593846 -21410810 - CIRCE LINE Composite 0 6356 6225 8 642 2919 31 76 0 chrUextra 7593843 7594224 -21410432 - CIRCE LINE Composite -364 5992 5583 8 642 6664 25 0 0 chrUextra 7594324 7595136 -21409520 - NINJA_I LTR Pao -1860 4151 3340 8 642 6072 14 0 1 chrUextra 7595236 7595960 -21408696 + DOC2_DM LINE Jockey 4047 4769 -24 8 642 2927 212 12 10 chrUextra 7596148 7596957 -21407699 - SAR_DM Satellite Satellite -416 1056 246 8 642 2209 118 25 11 chrUextra 7597064 7597872 -21406784 - DMSAT6 Satellite Satellite -6 818 1 8 642 6011 16 49 10 chrUextra 7597972 7598784 -21405872 - FW_DM LINE Jockey -293 4399 3556 8 642 1599 4 0 0 chrUextra 7598885 7599115 -21405541 + (TTGTG)n Simple_repeat Simple_repeat 1 230 0 8 642 4980 7 0 0 chrUextra 7599115 7599696 -21404960 - DMRT1B LINE R1 -864 4319 3739 8 642 589 292 34 78 chrUextra 7599925 7600607 -21404049 - GTWIN_I LTR Gypsy -2883 3538 3053 8 642 345 43 0 0 chrUextra 7600561 7600608 -21404048 - TLD2 Unknown Unknown 0 218 172 8 642 292 214 0 0 chrUextra 7600798 7600854 -21403802 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 8 642 723 251 153 81 chrUextra 7600963 7601518 -21403138 + Gypsy12_LTR LTR Gypsy 679 1273 -1063 8 80 3182 55 135 2 chrUextra 7601620 7602432 -21402224 - R1_DM LINE R1 -4357 999 80 8 643 5026 22 3 2 chrUextra 7602532 7603161 -21401495 - PROTOP_A DNA P -475 630 1 8 643 4532 2 14 0 chrUextra 7603444 7604016 -21400640 + DOC6_DM LINE Jockey 3643 4222 0 8 643 689 0 117 0 chrUextra 7604027 7604251 -21400405 + (TTA)n Simple_repeat Simple_repeat 1 250 0 8 643 3802 51 40 0 chrUextra 7604358 7604864 -21399792 + TART_B1 LINE telomeric 3000 3525 -7129 8 643 2157 84 13 3 chrUextra 7604858 7605167 -21399489 + TART_B1 LINE telomeric 4319 4630 -6024 8 643 2611 7 0 0 chrUextra 7605270 7605574 -21399082 - MDG3_I LTR Gypsy -4682 304 1 8 643 2048 22 4 50 chrUextra 7605573 7605853 -21398803 - MDG3_LTR LTR Gypsy 0 267 1 8 643 1234 33 17 17 chrUextra 7605853 7606012 -21398644 + FW_DM LINE Jockey 1668 1902 -2790 8 643 7043 2 0 0 chrUextra 7606180 7606992 -21397664 - DOC LINE Jockey -905 3820 3009 8 643 6561 20 31 2 chrUextra 7607092 7607904 -21396752 + MAX_I LTR Pao 2937 3771 -4143 8 643 6799 19 0 0 chrUextra 7608004 7608815 -21395841 - FW_DM LINE Jockey -350 4342 3532 8 643 31 26 0 0 chrUextra 7609448 7609486 -21395170 + AT_rich Low_complexity Low_complexity 1 38 0 8 643 5729 95 1 0 chrUextra 7609828 7610640 -21394016 + Gypsy12_I LTR Gypsy 2995 3807 -1739 8 643 1104 195 4 4 chrUextra 7610740 7610998 -21393658 - SAR_DM Satellite Satellite -719 753 496 8 643 644 63 53 0 chrUextra 7611003 7611098 -21393558 + ARS406_DM Unknown Unknown 90 189 -164 8 643 2407 166 21 6 chrUextra 7611013 7611540 -21393116 - SAR_DM Satellite Satellite -569 903 369 8 643 3200 8 5 0 chrUextra 7611652 7612039 -21392617 - QUASIMODO_I LTR Gypsy -3485 2575 2187 8 643 1328 0 22 16 chrUextra 7612564 7612747 -21391909 + NTS_DM Other Other 57 240 0 8 643 1831 0 17 17 chrUextra 7612747 7612987 -21391669 + NTS_DM Other Other 1 240 0 8 643 1301 6 0 18 chrUextra 7612987 7613152 -21391504 + NTS_DM Other Other 1 162 -78 8 643 488 119 36 0 chrUextra 7613262 7613346 -21391310 + NTS_DM Other Other 4 90 -150 8 643 2394 99 15 14 chrUextra 7613479 7614287 -21390369 - DMSAT6 Satellite Satellite -71 809 1 8 643 5315 61 53 3 chrUextra 7614388 7615141 -21389515 - R1_DM LINE R1 -4565 791 1 8 643 3422 28 52 1 chrUextra 7615300 7616112 -21388544 - R1_DM LINE R1 -1489 3867 3015 8 643 5821 25 2 69 chrUextra 7616212 7617024 -21387632 + Gypsy12_LTR LTR Gypsy 364 1121 -1215 8 643 6068 44 33 12 chrUextra 7617124 7617936 -21386720 + R1_DM LINE R1 1000 1828 -3528 8 643 1315 23 103 0 chrUextra 7618036 7618210 -21386446 - PROTOP_B DNA P -961 192 1 8 643 756 59 10 0 chrUextra 7618948 7619050 -21385606 + PROTOP_B DNA P 1008 1110 -43 8 643 977 147 182 4 chrUextra 7619047 7619272 -21385384 - DMCR1A LINE CR1 -1125 3345 3081 8 643 997 163 102 15 chrUextra 7619359 7619564 -21385092 + DMLTR5 LTR Gypsy 40 262 -4 8 643 1084 105 41 20 chrUextra 7619565 7619760 -21384896 + HMSBEAGLE_I LTR Gypsy 2 200 -6329 8 643 1273 199 162 20 chrUextra 7619860 7620280 -21384376 + TAHRE LINE telomeric 9352 9728 -735 8 643 550 191 338 49 chrUextra 7620274 7620620 -21384036 + HETA LINE telomeric 5465 5910 -171 8 643 34 24 0 0 chrUextra 7620630 7620671 -21383985 + AT_rich Low_complexity Low_complexity 1 41 0 8 643 6796 23 0 0 chrUextra 7620772 7621584 -21383072 - DIVER_I LTR Pao -2542 3101 2290 8 643 4371 25 51 0 chrUextra 7621684 7622237 -21382419 + DMCR1A LINE CR1 3890 4470 0 8 643 954 13 428 0 chrUextra 7622274 7622496 -21382160 + DOC2_DM LINE Jockey 1566 1882 -2911 8 643 393 74 0 0 chrUextra 7622596 7622650 -21382006 + Gypsy12_I LTR Gypsy 1501 1554 -3992 8 643 2091 111 12 12 chrUextra 7622657 7622976 -21381680 + Gypsy12_I LTR Gypsy 1503 1821 -3725 8 643 2865 87 60 18 chrUextra 7622973 7623407 -21381249 + Gypsy12_I LTR Gypsy 4465 4916 -630 8 643 259 258 15 15 chrUextra 7623507 7623574 -21381082 + (TATG)n Simple_repeat Simple_repeat 4 70 0 8 643 547 212 0 22 chrUextra 7623576 7623759 -21380897 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 643 402 318 0 0 chrUextra 7623738 7623917 -21380739 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 8 643 300 231 0 0 chrUextra 7623917 7623969 -21380687 + (CATG)n Simple_repeat Simple_repeat 2 53 0 8 643 1299 37 0 0 chrUextra 7624418 7624579 -21380077 + Invader6_LTR LTR Gypsy 233 393 0 8 643 585 152 223 4 chrUextra 7624579 7624815 -21379841 + MAX_I LTR Pao 280 567 -7347 8 643 1451 62 4 0 chrUextra 7625004 7625229 -21379427 - S_DM DNA Tc1 0 1736 1511 8 643 1620 9 0 0 chrUextra 7625329 7625646 -21379010 + (TATAA)n Simple_repeat Simple_repeat 1 317 0 8 643 4090 2 2 6 chrUextra 7625650 7626140 -21378516 + POGO DNA Pogo 1 488 -1633 8 643 21 89 0 0 chrUextra 7626839 7626895 -21377761 + AT_rich Low_complexity Low_complexity 1 56 0 8 643 1724 5 0 0 chrUextra 7627151 7627351 -21377305 + DMCR1A LINE CR1 2737 2936 -1534 8 643 4862 33 28 2 chrUextra 7627350 7627962 -21376694 + DMCR1A LINE CR1 3460 4087 -383 8 643 6325 40 7 1 chrUextra 7628062 7628873 -21375783 + R1_DM LINE R1 2208 3023 -2333 8 643 4350 6 2 4 chrUextra 7628973 7629486 -21375170 - R2_DM LINE R2 -3093 514 3 8 643 2639 0 0 0 chrUextra 7629485 7629784 -21374872 + R2_DM LINE R2 1524 1822 -1785 8 643 3160 194 29 23 chrUextra 7629884 7630695 -21373961 + SAR_DM Satellite Satellite 1 815 -208 8 643 803 217 15 0 chrUextra 7630795 7630998 -21373658 - SAR_DM Satellite Satellite -731 741 536 8 643 2338 75 32 20 chrUextra 7631001 7631417 -21373239 + Gypsy6A_LTR LTR Gypsy 1 420 0 8 643 873 52 5 180 chrUextra 7631417 7631606 -21373050 + Gypsy6_I LTR Gypsy 1 156 -6856 8 643 1071 0 0 0 chrUextra 7632398 7632517 -21372139 + (TTCTC)n Simple_repeat Simple_repeat 2 120 0 8 643 21 0 0 0 chrUextra 7632897 7632918 -21371738 + AT_rich Low_complexity Low_complexity 1 21 0 8 643 2971 183 34 27 chrUextra 7633528 7634335 -21370321 + SAR_DM Satellite Satellite 419 1230 -242 8 643 3202 184 19 16 chrUextra 7634439 7635250 -21369406 - SAR_DM Satellite Satellite -455 1017 205 8 643 1054 40 126 0 chrUextra 7635350 7635501 -21369155 + CIRCE LINE Composite 5823 5992 -364 8 643 961 68 0 0 chrUextra 7635498 7635630 -21369026 + CIRCE LINE Composite 6225 6356 0 8 643 2704 31 87 0 chrUextra 7635630 7635986 -21368670 + CIRCE LINE Composite 1 387 -5969 8 643 467 160 103 71 chrUextra 7636005 7636160 -21368496 - Gypsy12_LTR LTR Gypsy -1167 1169 1010 8 643 6465 37 10 0 chrUextra 7636261 7637072 -21367584 + R1_DM LINE R1 1169 1987 -3369 8 643 661 123 0 0 chrUextra 7637172 7637286 -21367370 - ARS406_DM Unknown Unknown -239 114 1 8 643 3083 199 10 11 chrUextra 7637193 7637983 -21366673 + SAR_DM Satellite Satellite 195 983 -489 8 643 4663 71 53 23 chrUextra 7638083 7638894 -21365762 - STALKER4_I LTR Gypsy -4964 1566 732 8 643 5928 55 2 15 chrUextra 7638994 7639805 -21364851 + CIRCE LINE Composite 1895 2695 -3661 8 643 3300 225 23 27 chrUextra 7639905 7641612 -21363044 - SAR_DM Satellite Satellite -469 1701 1 8 643 2443 178 7 16 chrUextra 7641727 7642293 -21362363 - SAR_DM Satellite Satellite -416 1056 496 8 643 657 53 53 0 chrUextra 7642298 7642393 -21362263 + ARS406_DM Unknown Unknown 90 189 -164 8 643 989 162 39 9 chrUextra 7642308 7642538 -21362118 - SAR_DM Satellite Satellite -569 903 667 8 643 247 250 0 0 chrUextra 7643003 7643067 -21361589 - ZAM_I LTR Gypsy -3793 3697 3634 8 643 3214 173 17 27 chrUextra 7643549 7644355 -21360301 + SAR_DM Satellite Satellite 384 1181 -291 8 643 1868 85 11 4 chrUextra 7644462 7644734 -21359922 - MDG1_LTR LTR Gypsy -46 396 123 8 643 294 87 0 0 chrUextra 7644739 7644785 -21359871 + (TTA)n Simple_repeat Simple_repeat 3 48 0 8 643 1754 142 13 0 chrUextra 7645371 7645688 -21358968 + STALKER4_I LTR Gypsy 239 559 -5971 8 643 1824 142 101 21 chrUextra 7645696 7646182 -21358474 + STALKER4_I LTR Gypsy 235 868 -5662 8 643 2895 121 53 63 chrUextra 7646285 7646949 -21357707 - HETA LINE telomeric -5096 985 329 8 643 1001 95 6 23 chrUextra 7646921 7647093 -21357563 - TART LINE telomeric -6131 8346 8178 8 643 2680 200 22 19 chrUextra 7647198 7648000 -21356656 + SAR_DM Satellite Satellite 195 1256 -216 8 643 3668 2 0 2 chrUextra 7648104 7648528 -21356128 + ROO_LTR LTR Pao 6 428 0 8 643 1532 176 194 3 chrUextra 7648528 7648910 -21355746 - Gypsy3_I LTR Gypsy -1233 4944 4490 8 643 2448 286 10 4 chrUextra 7649015 7649826 -21354830 + FROGGER_I LTR Copia 704 1519 -558 8 643 1265 0 0 0 chrUextra 7649926 7650076 -21354580 + DM176_I LTR Gypsy 6271 6420 0 8 643 4232 14 0 0 chrUextra 7650076 7650583 -21354073 + DM176_LTR LTR Gypsy 1 507 0 8 643 807 159 0 0 chrUextra 7650585 7650736 -21353920 + (TA)n Simple_repeat Simple_repeat 2 152 0 8 643 6197 19 47 0 chrUextra 7650837 7651646 -21353010 - STALKER4_I LTR Gypsy -4164 2366 1520 8 643 702 119 8 0 chrUextra 7651748 7651874 -21352782 - ARS406_DM Unknown Unknown -226 127 1 8 643 3264 178 9 13 chrUextra 7651781 7652559 -21352097 + SAR_DM Satellite Satellite 195 969 -503 8 643 1648 184 48 4 chrUextra 7652659 7653470 -21351186 - SAR_DM Satellite Satellite -694 846 1 8 643 932 60 6 18 chrUextra 7653570 7654372 -21350284 + RSP Satellite Satellite 1 792 0 8 643 6717 20 2 0 chrUextra 7654481 7655292 -21349364 + TAHRE LINE telomeric 4874 5686 -4777 8 643 6744 6 30 0 chrUextra 7655392 7656203 -21348453 - DMRT1B LINE R1 -2089 3094 2260 8 643 3498 184 9 6 chrUextra 7656306 7657114 -21347542 + SAR_DM Satellite Satellite 224 1033 -439 8 643 6940 2 1 0 chrUextra 7657214 7658025 -21346631 - ROO_I LTR Pao -2238 6018 5207 8 643 3098 183 10 11 chrUextra 7658130 7658936 -21345720 - SAR_DM Satellite Satellite -216 1256 180 8 643 590 163 382 0 chrUextra 7659036 7659206 -21345450 - Gypsy5_I LTR Gypsy -6002 507 273 8 643 1506 125 118 0 chrUextra 7659208 7659495 -21345161 + MAX_LTR LTR Pao 1 321 0 8 643 2143 39 3 114 chrUextra 7659495 7659847 -21344809 + MAX_I LTR Pao 1 313 -7601 8 643 5775 59 78 0 chrUextra 7659947 7660758 -21343898 + Baggins1 LINE LOA 4355 5228 -225 8 643 3044 192 15 26 chrUextra 7660858 7661664 -21342992 + SAR_DM Satellite Satellite 434 1230 -242 8 643 3705 57 44 19 chrUextra 7661954 7662579 -21342077 - PROTOP_A DNA P 0 1153 572 8 643 2656 143 32 19 chrUextra 7662680 7664401 -21340255 + DMSAT6 Satellite Satellite 1 1742 -64 8 643 5717 95 0 0 chrUextra 7664502 7665309 -21339347 - Gypsy12_I LTR Gypsy -1893 3653 2847 8 643 6705 14 0 6 chrUextra 7665412 7666222 -21338434 + FW_DM LINE Jockey 1618 2422 -2270 8 643 6560 31 2 0 chrUextra 7666322 7667132 -21337524 + DIVER2_I LTR Pao 611 1422 -2725 8 643 934 0 9 0 chrUextra 7667232 7667342 -21337314 - ROO_I LTR Pao -8145 111 1 8 643 3742 2 0 0 chrUextra 7667342 7667770 -21336886 - ROO_LTR LTR Pao 0 428 1 8 643 1810 73 0 0 chrUextra 7667770 7668042 -21336614 + IDEFIX_I LTR Gypsy 5032 5303 -325 8 643 5323 94 38 11 chrUextra 7668142 7668952 -21335704 + Gypsy12_I LTR Gypsy 831 1662 -3884 8 643 3139 181 10 21 chrUextra 7669052 7669858 -21334798 - SAR_DM Satellite Satellite -481 991 195 8 643 2137 186 23 17 chrUextra 7670032 7670563 -21334093 + SAR_DM Satellite Satellite 543 1076 -396 8 643 717 200 35 15 chrUextra 7670574 7670772 -21333884 + SAR_DM Satellite Satellite 543 744 -728 8 643 35 0 0 0 chrUextra 7670935 7670970 -21333686 + AT_rich Low_complexity Low_complexity 1 35 0 8 643 2238 159 86 3 chrUextra 7670988 7671524 -21333132 - Gypsy5_I LTR Gypsy -1239 5270 4691 8 643 993 88 7 0 chrUextra 7671535 7671682 -21332974 - Gypsy5_I LTR Gypsy -2234 4275 4128 8 643 6359 22 54 0 chrUextra 7671782 7672592 -21332064 - R1_DM LINE R1 -110 5246 4393 8 643 6320 26 1 20 chrUextra 7672692 7673502 -21331154 + QUASIMODO_I LTR Gypsy 81 875 -5185 8 643 3460 184 8 8 chrUextra 7673602 7674405 -21330251 - SAR_DM Satellite Satellite -446 1026 224 8 643 387 118 0 0 chrUextra 7674344 7674412 -21330244 + ARS406_DM Unknown Unknown 2 69 -284 8 643 4908 4 128 1 chrUextra 7674512 7675274 -21329382 - DMRT1B LINE R1 -3612 1571 713 8 643 383 0 0 0 chrUextra 7675275 7675322 -21329334 - QUASIMODO_LTR LTR Gypsy -604 54 8 8 643 1255 330 3 3 chrUextra 7675533 7676105 -21328551 + HMSBEAGLE_I LTR Gypsy 1509 2080 -4449 8 643 524 188 16 0 chrUextra 7676332 7676460 -21328196 - ARS406_DM Unknown Unknown -223 130 1 8 643 2864 179 67 14 chrUextra 7676365 7677142 -21327514 + SAR_DM Satellite Satellite 191 1008 -464 8 643 2003 154 128 0 chrUextra 7677242 7677770 -21326886 - DMRT1B LINE R1 -620 4563 3968 8 643 1990 45 0 11 chrUextra 7677773 7678045 -21326611 + TRANSIB2 DNA Transib 10 278 -2566 8 643 6596 15 4 0 chrUextra 7678152 7678959 -21325697 + ROO_I LTR Pao 2415 3224 -5032 8 643 6688 20 0 2 chrUextra 7679972 7680782 -21323874 - R1_DM LINE R1 -2890 2466 1659 8 643 1620 0 0 0 chrUextra 7681300 7681480 -21323176 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 8 643 1228 41 0 12 chrUextra 7681500 7681673 -21322983 + (ATAAG)n Simple_repeat Simple_repeat 1 171 0 8 643 612 0 52 0 chrUextra 7681792 7681869 -21322787 + DOC3_DM LINE Jockey 4416 4496 -244 8 643 707 37 37 0 chrUextra 7681866 7681973 -21322683 + DOC3_DM LINE Jockey 4630 4740 0 8 643 4633 47 12 0 chrUextra 7682009 7682602 -21322054 + BS3_DM LINE Jockey 341 940 -850 8 643 936 35 0 0 chrUextra 7682702 7682816 -21321840 + DMCR1A LINE CR1 4357 4470 0 8 643 516 225 62 85 chrUextra 7682823 7683110 -21321546 - Gypsy8_LTR LTR Gypsy -5 299 1 8 643 6938 1 2 2 chrUextra 7683612 7684422 -21320234 + LSU-rRNA_Dme rRNA rRNA 850 1659 -2241 8 643 3516 176 7 11 chrUextra 7684522 7685332 -21319324 + SAR_DM Satellite Satellite 212 1018 -454 8 643 6361 24 25 11 chrUextra 7685434 7686242 -21318414 - FW_DM LINE Jockey -3120 1572 754 8 643 5540 16 14 9 chrUextra 7686342 7687030 -21317626 + R1_DM LINE R1 4374 5065 -291 8 643 895 45 0 0 chrUextra 7687031 7687142 -21317514 + R1_DM LINE R1 5246 5356 0 8 643 41 66 0 0 chrUextra 7687252 7687328 -21317328 + AT_rich Low_complexity Low_complexity 1 76 0 8 643 22 35 0 0 chrUextra 7687415 7687444 -21317212 + AT_rich Low_complexity Low_complexity 1 29 0 8 643 1252 261 2 7 chrUextra 7687600 7688062 -21316594 - Gypsy11_I LTR Gypsy -137 3387 2928 8 643 3032 198 20 22 chrUextra 7688163 7688971 -21315685 + SAR_DM Satellite Satellite 425 1230 -242 8 643 6409 32 15 1 chrUextra 7689072 7689882 -21314774 + DMCR1A LINE CR1 3187 4007 -463 8 643 261 83 0 0 chrUextra 7689982 7690018 -21314638 + DM297_I LTR Gypsy 753 788 -5379 8 643 470 73 60 12 chrUextra 7690006 7690089 -21314567 - DM297_I LTR Gypsy -6080 87 1 8 643 526 99 369 0 chrUextra 7690089 7690255 -21314401 - DM297_LTR LTR Gypsy 0 414 187 8 643 313 233 23 11 chrUextra 7690280 7690367 -21314289 - R1-2_DM LINE R1 -12 5344 5257 8 643 299 167 0 0 chrUextra 7690473 7690535 -21314121 - R1-2_DM LINE R1 0 3216 3167 8 643 1673 68 161 0 chrUextra 7690531 7690792 -21313864 - R1-2_DM LINE R1 -551 2665 2363 8 643 994 311 2 7 chrUextra 7690892 7691326 -21313330 - MDG3_I LTR Gypsy -862 4124 3693 8 643 635 295 10 29 chrUextra 7691341 7691655 -21313001 - MDG3_I LTR Gypsy -1347 3639 3332 8 643 1409 11 0 6 chrUextra 7691802 7691977 -21312679 - FW_DM LINE Jockey -4495 197 24 8 643 1517 26 3 16 chrUextra 7691982 7692612 -21312044 + (TATAA)n Simple_repeat Simple_repeat 1 621 0 8 643 2458 3 0 0 chrUextra 7692712 7693018 -21311638 + DOC LINE Jockey 4420 4725 0 8 643 1977 25 0 8 chrUextra 7693023 7693270 -21311386 + CIRCE LINE Composite 3480 3724 -2632 8 643 1777 40 0 35 chrUextra 7693266 7693522 -21311134 + CIRCE LINE Composite 4391 4637 -1719 8 643 3596 22 4 24 chrUextra 7693622 7694086 -21310570 - CIRCE LINE Composite -4014 2342 1888 8 643 609 293 42 57 chrUextra 7693751 7694153 -21310503 - Gypsy12_I LTR Gypsy -1316 4230 3835 8 643 2203 30 4 0 chrUextra 7694162 7694432 -21310224 - CIRCE LINE Composite -4474 1882 1612 8 643 2198 284 5 14 chrUextra 7694584 7695342 -21309314 + ROVER-I_DM LTR Gypsy 904 1654 -4930 8 643 6889 11 0 0 chrUextra 7695442 7696251 -21308405 + DOC2_DM LINE Jockey 3481 4289 -504 8 643 3571 0 2 2 chrUextra 7696352 7696767 -21307889 - DOC LINE Jockey -4306 419 5 8 643 6797 9 7 1 chrUextra 7697262 7698072 -21306584 + DOC2_DM LINE Jockey 2960 3774 -1019 8 643 3330 177 15 21 chrUextra 7698172 7698981 -21305675 + SAR_DM Satellite Satellite 369 1172 -300 8 643 1437 12 0 0 chrUextra 7699082 7699249 -21305407 + (TTATA)n Simple_repeat Simple_repeat 2 168 0 8 643 3036 8 58 3 chrUextra 7699277 7699658 -21304998 - STALKER4_LTR LTR Gypsy 0 402 1 8 643 1796 4 0 4 chrUextra 7699658 7699892 -21304764 - STALKER4_I LTR Gypsy 0 6530 6298 8 643 3226 176 32 21 chrUextra 7699992 7700802 -21303854 + SAR_DM Satellite Satellite 389 1207 -265 8 643 4822 17 0 0 chrUextra 7700902 7701484 -21303172 + FW_DM LINE Jockey 1324 1905 -2787 8 643 1948 13 0 0 chrUextra 7701482 7701712 -21302944 + FW_DM LINE Jockey 2282 2511 -2181 8 643 2040 35 4 0 chrUextra 7701815 7702072 -21302584 + CIRCE LINE Composite 5072 5329 -1027 8 643 21 0 0 0 chrUextra 7702074 7702095 -21302561 + AT_rich Low_complexity Low_complexity 1 21 0 8 643 2308 39 23 0 chrUextra 7702095 7702404 -21302252 - IDEFIX_LTR LTR Gypsy -278 316 1 8 643 845 98 43 11 chrUextra 7702404 7702622 -21302034 + Invader2_I LTR Gypsy 3419 3709 -883 8 643 4680 16 0 0 chrUextra 7702722 7703284 -21301372 - FW_DM LINE Jockey -3673 1019 458 8 643 1146 28 0 0 chrUextra 7703279 7703421 -21301235 - R1_DM LINE R1 -2242 3114 2973 8 643 844 54 0 0 chrUextra 7703420 7703532 -21301124 + FW_DM LINE Jockey 353 464 -4228 8 643 2748 0 0 0 chrUextra 7703632 7703957 -21300699 + BARI_DM DNA Tc1 1403 1727 -1 8 643 4182 0 2 0 chrUextra 7703957 7704442 -21300214 + BARI_DM DNA Tc1 4 489 -1239 8 643 519 90 0 196 chrUextra 7704866 7705004 -21299652 + DNAREP1_DM LINE Penelope 475 585 -9 8 643 21 0 0 0 chrUextra 7705090 7705111 -21299545 + AT_rich Low_complexity Low_complexity 1 21 0 8 643 294 191 23 0 chrUextra 7705206 7705285 -21299371 - PROTOP_A DNA P -981 124 43 8 643 1923 104 61 58 chrUextra 7705452 7705830 -21298826 - Gypsy6_LTR LTR Gypsy -28 379 1 8 643 1919 185 5 5 chrUextra 7705830 7706249 -21298407 - Gypsy3_I LTR Gypsy 0 6177 5892 8 643 6788 16 0 1 chrUextra 7706362 7707172 -21297484 - HETA LINE telomeric -3584 2497 1689 8 643 3614 169 94 11 chrUextra 7707272 7708071 -21296585 + Gypsy5_I LTR Gypsy 278 1142 -5367 8 643 4388 11 6 0 chrUextra 7708182 7708717 -21295939 + DM176_I LTR Gypsy 3127 3664 -2756 8 643 2229 8 0 0 chrUextra 7708726 7708992 -21295664 + DM176_I LTR Gypsy 3817 4082 -2338 8 643 2988 208 7 16 chrUextra 7709092 7709898 -21294758 + SAR_DM Satellite Satellite 419 1217 -255 8 643 787 0 104 0 chrUextra 7710022 7710527 -21294129 + (GTCTG)n Simple_repeat Simple_repeat 1 557 0 8 643 388 139 76 0 chrUextra 7710534 7710613 -21294043 - DNAREP1_DM LINE Penelope -509 85 1 8 643 6832 11 0 0 chrUextra 7710912 7711722 -21292934 + HETA LINE telomeric 2228 3037 -3044 8 643 1085 275 96 10 chrUextra 7712733 7713541 -21291115 - TV1I LTR Gypsy -2280 3683 2807 8 643 3522 179 9 10 chrUextra 7713643 7714452 -21290204 + SAR_DM Satellite Satellite 195 1002 -470 8 643 332 0 0 0 chrUextra 7714552 7714592 -21290064 + ARS406_DM Unknown Unknown 143 182 -171 8 643 3664 227 14 34 chrUextra 7714590 7716268 -21288388 - SAR_DM Satellite Satellite -478 1644 1 8 643 28 48 0 0 chrUextra 7716628 7716670 -21287986 + AT_rich Low_complexity Low_complexity 1 42 0 8 643 32 0 0 0 chrUextra 7716998 7717030 -21287626 + AT_rich Low_complexity Low_complexity 1 32 0 8 643 3337 180 8 13 chrUextra 7717282 7718065 -21286591 + SAR_DM Satellite Satellite 298 1076 -396 8 643 1929 136 155 43 chrUextra 7718192 7718638 -21286018 + TART LINE telomeric 9781 10276 -4201 8 643 779 29 29 0 chrUextra 7718649 7718754 -21285902 + TART LINE telomeric 10556 10663 -3814 8 643 448 30 88 15 chrUextra 7718752 7718820 -21285836 + TAHRE LINE telomeric 10380 10452 -11 8 643 878 129 12 41 chrUextra 7718820 7718990 -21285666 + TART LINE telomeric 6985 7149 -7328 8 643 1243 49 0 0 chrUextra 7719102 7719265 -21285391 + G2_DM LINE Jockey 2471 2633 -469 8 643 5068 42 3 0 chrUextra 7719264 7719911 -21284745 - G2_DM LINE Jockey -725 2377 1729 8 643 1727 58 0 0 chrUextra 7720426 7720652 -21284004 + PROTOP DNA P 74 299 -4181 8 643 981 50 144 0 chrUextra 7720639 7720820 -21283836 + PROTOP DNA P 519 725 -3755 8 643 6309 20 0 30 chrUextra 7720920 7721729 -21282927 - QUASIMODO_I LTR Gypsy -5234 826 42 8 643 4140 0 0 0 chrUextra 7721829 7722303 -21282353 - FW_DM LINE Jockey -905 3787 3314 8 643 1404 108 0 9 chrUextra 7722334 7722549 -21282107 - BS2 LINE Jockey -4259 462 250 8 643 2497 86 43 11 chrUextra 7722738 7723547 -21281109 - DMSAT6 Satellite Satellite -95 835 1 8 643 1555 57 14 0 chrUextra 7723647 7723859 -21280797 - IDEFIX_I LTR Gypsy -5413 215 1 8 643 25 0 0 0 chrUextra 7724126 7724151 -21280505 + AT_rich Low_complexity Low_complexity 1 25 0 8 643 612 71 70 9 chrUextra 7724342 7724456 -21280200 - IDEFIX_LTR LTR Gypsy 0 594 474 8 643 1094 138 0 6 chrUextra 7724556 7724731 -21279925 + Gypsy12_I LTR Gypsy 1648 1821 -3725 8 643 4041 91 56 13 chrUextra 7724728 7725340 -21279316 + Gypsy12_I LTR Gypsy 4465 5102 -444 8 643 885 158 0 0 chrUextra 7725465 7725623 -21279033 + (TATG)n Simple_repeat Simple_repeat 2 159 0 8 643 1137 128 0 0 chrUextra 7725622 7725802 -21278854 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 643 449 161 0 11 chrUextra 7725808 7725896 -21278760 + (TATG)n Simple_repeat Simple_repeat 2 88 0 8 643 1116 133 0 0 chrUextra 7725895 7726075 -21278581 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 643 1040 123 0 22 chrUextra 7726089 7726272 -21278384 + (TATG)n Simple_repeat Simple_repeat 2 180 0 8 643 6326 1 4 5 chrUextra 7726374 7727127 -21277529 + LSU-rRNA_Dme rRNA rRNA 1037 1788 -2112 8 643 5543 47 11 1 chrUextra 7727284 7728092 -21276564 + Gypsy6_I LTR Gypsy 2608 3944 -3068 8 643 1158 122 0 0 chrUextra 7728229 7728593 -21276063 + (TA)n Simple_repeat Simple_repeat 1 364 0 8 643 1146 122 0 0 chrUextra 7728599 7728779 -21275877 + (TATG)n Simple_repeat Simple_repeat 1 180 0 8 643 1103 122 0 11 chrUextra 7728804 7728986 -21275670 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 643 3676 268 20 36 chrUextra 7729104 7730810 -21273846 + SAR_DM Satellite Satellite 1 1678 -208 8 643 494 17 0 0 chrUextra 7730760 7730819 -21273837 - ARS406_DM Unknown Unknown -164 189 131 8 643 1875 242 118 9 chrUextra 7731087 7731671 -21272985 + Invader3_I LTR Gypsy 198 845 -4043 8 643 229 94 0 0 chrUextra 7731675 7731707 -21272949 + Invader3_I LTR Gypsy 1440 1471 -3417 8 643 2448 88 19 29 chrUextra 7731828 7732637 -21272019 - DMSAT6 Satellite Satellite -4 800 1 8 80 6452 27 36 0 chrUextra 7732737 7733546 -21271110 - R1_DM LINE R1 -173 5183 4346 8 644 254 192 41 0 chrUextra 7734276 7734349 -21270307 + (TATAA)n Simple_repeat Simple_repeat 5 80 0 8 644 1669 86 58 168 chrUextra 7734555 7734931 -21269725 - Gypsy12_I LTR Gypsy -3902 1644 1310 8 644 2948 11 3 6 chrUextra 7734929 7735285 -21269371 - DM412B_LTR LTR Gypsy -89 482 128 8 644 578 25 25 12 chrUextra 7735283 7735364 -21269292 - T412LTR LTR LTR -320 161 80 8 644 6076 45 31 6 chrUextra 7735464 7736273 -21268383 - IDEFIX_I LTR Gypsy -3420 2208 1380 8 644 787 170 6 19 chrUextra 7736444 7736600 -21268056 + HETRP_DM Satellite Satellite 1516 1669 -203 8 644 276 185 250 42 chrUextra 7736758 7736854 -21267802 + HETRP_DM Satellite Satellite 1519 1634 -238 8 644 787 170 6 19 chrUextra 7736902 7737058 -21267598 + HETRP_DM Satellite Satellite 1516 1669 -203 8 644 5880 29 4 1 chrUextra 7737283 7738091 -21266565 - TART LINE telomeric -5437 9040 8328 8 644 4743 0 0 2 chrUextra 7738191 7738735 -21265921 + R2_DM LINE R2 3065 3607 0 8 644 659 26 0 0 chrUextra 7738734 7738812 -21265844 + LSU-rRNA_Dme rRNA rRNA 2578 2655 -1245 8 644 886 10 0 0 chrUextra 7738812 7738914 -21265742 + R1_DM LINE R1 5255 5356 0 8 644 762 11 0 0 chrUextra 7738912 7739000 -21265656 + LSU-rRNA_Dme rRNA rRNA 2640 2727 -1173 8 644 3124 179 27 22 chrUextra 7739100 7739909 -21264747 + SAR_DM Satellite Satellite 1 813 -411 8 644 5129 19 0 2 chrUextra 7740009 7740629 -21264027 + R1_DM LINE R1 1675 2293 -3063 8 644 1689 30 0 0 chrUextra 7740615 7740818 -21263838 + R1_DM LINE R1 3134 3336 -2020 8 644 5152 115 5 2 chrUextra 7740918 7741722 -21262934 - TART LINE telomeric -3689 2392 1587 8 644 3564 175 9 9 chrUextra 7741830 7742632 -21262024 - SAR_DM Satellite Satellite -425 1047 246 8 644 2222 127 14 27 chrUextra 7742736 7743545 -21261111 + DMSAT6 Satellite Satellite 1 798 -51 8 644 2905 184 26 29 chrUextra 7743645 7744427 -21260229 - SAR_DM Satellite Satellite -259 1213 435 8 644 2151 113 0 12 chrUextra 7744568 7744891 -21259765 + Gypsy12_I LTR Gypsy 1503 1821 -3725 8 644 3097 88 55 19 chrUextra 7744888 7745363 -21259293 + Gypsy12_I LTR Gypsy 4465 4956 -590 8 644 3292 0 0 0 chrUextra 7745463 7745838 -21258818 + LSU-rRNA_Dme rRNA rRNA 3526 3900 0 8 644 29 28 0 0 chrUextra 7745910 7745946 -21258710 + AT_rich Low_complexity Low_complexity 1 36 0 8 644 246 150 0 0 chrUextra 7745951 7745991 -21258665 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 644 246 150 0 0 chrUextra 7746043 7746083 -21258573 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 644 246 150 0 0 chrUextra 7746135 7746175 -21258481 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 644 5863 3 68 0 chrUextra 7746372 7747095 -21257561 + LSU-rRNA_Dme rRNA rRNA 1861 2632 -1268 8 644 708 0 12 0 chrUextra 7747095 7747181 -21257475 + R1_DM LINE R1 1 87 -5269 8 644 431 198 0 18 chrUextra 7748190 7748303 -21256353 + XDMR_DM Unknown Unknown 250 360 0 8 644 3210 183 9 18 chrUextra 7748217 7748997 -21255659 - SAR_DM Satellite Satellite -354 1118 346 8 644 3731 48 8 12 chrUextra 7749126 7749635 -21255021 - BATUMI_I LTR Pao -4389 3574 3068 8 644 602 96 11 11 chrUextra 7749634 7749754 -21254902 - BATUMI_I LTR Pao -5170 2744 2623 8 644 1145 15 0 0 chrUextra 7749772 7749908 -21254748 - BATUMI_I LTR Pao -5476 2487 2352 8 644 2925 70 12 14 chrUextra 7750009 7750432 -21254224 - DMCR1A LINE CR1 -1226 3244 2823 8 644 1742 52 264 0 chrUextra 7750432 7750817 -21253839 - DMCR1A LINE CR1 -1870 2600 2114 8 644 2930 187 31 28 chrUextra 7750917 7751724 -21252932 + SAR_DM Satellite Satellite 1 809 -219 8 644 6611 6 11 0 chrUextra 7751826 7752635 -21252021 + STALKER4_I LTR Gypsy 2693 3510 -3020 8 644 1123 276 29 33 chrUextra 7752740 7753530 -21251126 + STALKER4_I LTR Gypsy 2694 3480 -3050 8 644 2961 181 66 11 chrUextra 7753648 7754453 -21250203 - SAR_DM Satellite Satellite -715 849 1 8 644 5257 16 2 0 chrUextra 7754724 7755362 -21249294 - PROTOP_A DNA P 0 1105 467 8 644 515 54 1 0 chrUextra 7755462 7755530 -21249126 - FW2_DM LINE Jockey -831 3130 3070 8 644 1565 49 13 13 chrUextra 7755535 7755762 -21248894 - FW2_DM LINE Jockey -1756 2205 1979 8 644 4268 29 0 2 chrUextra 7755749 7756271 -21248385 - FW2_DM LINE Jockey -2115 1846 1326 8 644 26 0 0 0 chrUextra 7757279 7757305 -21247351 + AT_rich Low_complexity Low_complexity 1 26 0 8 644 551 0 131 6 chrUextra 7757305 7757626 -21247030 + (TA)n Simple_repeat Simple_repeat 1 361 0 8 644 2316 8 0 0 chrUextra 7757631 7757897 -21246759 - DMLTR5 LTR Gypsy 0 266 1 8 644 1609 0 0 0 chrUextra 7757897 7758087 -21246569 - HMSBEAGLE_I LTR Gypsy 0 6529 6340 8 644 6009 19 5 34 chrUextra 7758187 7758989 -21245667 + STALKER4_I LTR Gypsy 3178 3956 -2574 8 644 5054 19 13 5 chrUextra 7759095 7759722 -21244934 - Transib5 DNA Transib -1408 1593 962 8 644 1263 72 16 6 chrUextra 7759721 7759903 -21244753 + DMRT1A LINE R1 4837 5020 -163 8 644 3432 180 10 10 chrUextra 7760003 7760806 -21243850 - SAR_DM Satellite Satellite -443 1029 227 8 644 7058 0 1 1 chrUextra 7760911 7761719 -21242937 + GTWIN_I LTR Gypsy 4485 5292 -1129 8 644 3038 189 27 21 chrUextra 7761820 7762627 -21242029 - SAR_DM Satellite Satellite -242 1230 419 8 644 2568 94 31 4 chrUextra 7762727 7763535 -21241121 - DMSAT6 Satellite Satellite -105 829 1 8 644 234 50 200 0 chrUextra 7764248 7764288 -21240368 + PROTOP_B DNA P 1 48 -1105 8 644 1118 66 7 0 chrUextra 7764291 7764443 -21240213 + Gypsy12_I LTR Gypsy 2449 2601 -2945 8 644 3894 30 0 4 chrUextra 7764543 7765046 -21239610 + CIRCE LINE Composite 4480 4980 -1376 8 644 1118 73 0 0 chrUextra 7765200 7765351 -21239305 - R1_DM LINE R1 -4037 1319 1169 8 644 2372 99 14 38 chrUextra 7765451 7766247 -21238409 + DMSAT6 Satellite Satellite 1 776 -31 8 644 2074 30 57 0 chrUextra 7766359 7766623 -21238033 - PROTOP_A DNA P -807 298 20 8 644 6973 2 0 1 chrUextra 7767267 7768075 -21236581 - ROO_I LTR Pao -575 7681 6875 8 644 7036 2 0 1 chrUextra 7768175 7768983 -21235673 - LSU-rRNA_Dme rRNA rRNA -527 3373 2567 8 644 3193 188 11 12 chrUextra 7769083 7769891 -21234765 + SAR_DM Satellite Satellite 185 991 -481 8 644 2938 177 10 4 chrUextra 7769991 7770796 -21233860 + SAR_DM Satellite Satellite 1 809 -677 8 644 4160 192 0 0 chrUextra 7771807 7772615 -21232041 + ROVER-I_DM LTR Gypsy 2665 3472 -3112 8 644 2295 7 0 0 chrUextra 7772715 7772987 -21231669 - FW_DM LINE Jockey -3937 755 484 8 644 2595 202 2 4 chrUextra 7772986 7773523 -21231133 - Gypsy6_I LTR Gypsy -2139 4873 4338 8 644 4401 6 132 6 chrUextra 7773623 7774273 -21230383 + MDG1_I LTR Gypsy 5878 6799 -98 8 644 423 100 0 0 chrUextra 7774277 7774347 -21230309 + (TAA)n Simple_repeat Simple_repeat 3 72 0 8 644 690 0 12 0 chrUextra 7774347 7774431 -21230225 + MDG1_LTR LTR Gypsy 87 171 -271 8 644 291 28 0 0 chrUextra 7774786 7774822 -21229834 + (TTCTC)n Simple_repeat Simple_repeat 2 37 0 8 644 369 0 0 0 chrUextra 7774829 7774870 -21229786 + (GAGAA)n Simple_repeat Simple_repeat 4 44 0 8 644 3103 101 17 13 chrUextra 7775439 7775991 -21228665 + MDG1_I LTR Gypsy 5768 6695 -202 8 644 288 0 0 0 chrUextra 7775991 7776023 -21228633 + (TA)n Simple_repeat Simple_repeat 2 33 0 8 644 608 265 83 61 chrUextra 7776023 7776129 -21228527 + MDG1_I LTR Gypsy 6696 6798 -99 8 644 909 44 0 0 chrUextra 7776133 7776247 -21228409 + (TAA)n Simple_repeat Simple_repeat 3 116 0 8 644 3150 176 21 37 chrUextra 7777255 7778062 -21226594 - SAR_DM Satellite Satellite -417 1055 262 8 644 2346 220 26 51 chrUextra 7778165 7778970 -21225686 - HETA LINE telomeric -1970 4111 3327 8 644 6753 5 1 0 chrUextra 7779979 7780787 -21223869 - DMRT1A LINE R1 -3807 1376 568 8 644 6476 30 1 1 chrUextra 7780887 7781695 -21222961 + R1_DM LINE R1 2039 2846 -2510 8 644 4733 59 26 7 chrUextra 7781795 7782574 -21222082 + TART LINE telomeric 10051 10663 -3814 8 644 3459 21 34 5 chrUextra 7783073 7783511 -21221145 + PROTOP_B DNA P 1 451 -702 8 644 24 32 0 0 chrUextra 7784044 7784075 -21220581 + AT_rich Low_complexity Low_complexity 1 31 0 8 644 23 0 0 0 chrUextra 7784154 7784177 -21220479 + AT_rich Low_complexity Low_complexity 1 23 0 8 644 593 79 11 0 chrUextra 7784177 7784266 -21220390 - BS3_DM LINE Jockey -1 1789 1700 8 644 607 11 0 132 chrUextra 7785060 7785265 -21219391 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 8 644 220 204 68 0 chrUextra 7785224 7785327 -21219329 + A-rich Low_complexity Low_complexity 5 114 0 8 644 571 42 0 0 chrUextra 7785427 7785499 -21219157 + ARS406_DM Unknown Unknown 118 189 -164 8 644 3108 186 15 21 chrUextra 7785436 7786235 -21218421 - SAR_DM Satellite Satellite -242 1230 437 8 644 180 0 0 0 chrUextra 7786335 7786355 -21218301 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 644 2119 102 52 134 chrUextra 7786526 7787069 -21217587 + PROTOP_B DNA P 618 1115 -38 8 644 6650 20 2 0 chrUextra 7787243 7788051 -21216605 + IDEFIX_I LTR Gypsy 1552 2361 -3267 8 644 1249 25 0 0 chrUextra 7788454 7788612 -21216044 + MDG1_LTR LTR Gypsy 284 441 -1 8 644 531 0 0 0 chrUextra 7788612 7788671 -21215985 + (CAAGA)n Simple_repeat Simple_repeat 5 63 0 8 644 23 68 0 0 chrUextra 7789774 7789818 -21214838 + AT_rich Low_complexity Low_complexity 1 44 0 8 644 3177 193 14 23 chrUextra 7789977 7790775 -21213881 - SAR_DM Satellite Satellite -535 790 1 8 644 6154 28 1 0 chrUextra 7790930 7791683 -21212973 - R1_DM LINE R1 0 5356 4603 8 644 1321 62 0 10 chrUextra 7791784 7791981 -21212675 - CIRCE LINE Composite -1504 4852 4658 8 644 3927 81 5 30 chrUextra 7791981 7792591 -21212065 - CIRCE LINE Composite -2431 3925 3331 8 644 2066 201 31 8 chrUextra 7792691 7792891 -21211765 - SAR_DM Satellite Satellite -1030 827 607 8 644 387 94 16 0 chrUextra 7792891 7792955 -21211701 + ARS406_DM Unknown Unknown 122 186 -167 8 644 2066 201 31 8 chrUextra 7792955 7793499 -21211157 - SAR_DM Satellite Satellite -1030 606 1 8 644 1540 0 0 0 chrUextra 7793599 7793774 -21210882 + LSU-rRNA_Dme rRNA rRNA 2404 2578 -1322 8 644 5493 2 0 0 chrUextra 7793773 7794407 -21210249 + R2_DM LINE R2 605 1238 -2369 8 644 5792 7 68 0 chrUextra 7794507 7795315 -21209341 + Gypsy4_I LTR Gypsy 2818 3680 -2608 8 644 2717 201 68 35 chrUextra 7795415 7796223 -21208433 + TAHRE LINE telomeric 127 961 -9502 8 644 706 11 0 11 chrUextra 7796323 7796411 -21208245 - MICROPIA_I LTR Gypsy -4389 87 1 8 644 3907 6 0 61 chrUextra 7796411 7796918 -21207738 - MICROPIA_LTR LTR Gypsy 0 476 1 8 644 1844 5 5 0 chrUextra 7796918 7797131 -21207525 - STALKER4_LTR LTR Gypsy -146 256 43 8 644 6937 5 0 0 chrUextra 7797231 7798039 -21206617 + Gypsy4_I LTR Gypsy 308 1115 -5173 8 644 6149 28 76 0 chrUextra 7799063 7799855 -21204801 - R1_DM LINE R1 0 5356 4505 8 644 2693 81 123 1 chrUextra 7799959 7800763 -21203893 - Gypsy12_I LTR Gypsy 0 5546 4610 8 644 1965 17 0 0 chrUextra 7800863 7801097 -21203559 - DIVER2_I LTR Pao -171 3976 3743 8 644 1451 38 0 103 chrUextra 7801095 7801329 -21203327 - DIVER2_I LTR Pao -2572 1575 1366 8 644 6050 29 53 4 chrUextra 7801773 7802577 -21202079 - CIRCE LINE Composite -2634 3722 2879 8 644 297 70 0 0 chrUextra 7802679 7802722 -21201934 - CIRCE LINE Composite -3178 3178 3136 8 644 5533 48 3 28 chrUextra 7802725 7803487 -21201169 - CIRCE LINE Composite -3487 2869 2127 8 644 1741 30 94 4 chrUextra 7803587 7803620 -21201036 - Stalker3_LTR LTR Gypsy -116 256 202 8 644 198 0 0 0 chrUextra 7803620 7803642 -21201014 + (CTTAT)n Simple_repeat Simple_repeat 3 24 0 8 644 1741 30 94 4 chrUextra 7803642 7803843 -21200813 - Stalker3_LTR LTR Gypsy -171 201 1 8 644 337 39 0 24 chrUextra 7803843 7803912 -21200744 - STALKER4_I LTR Gypsy 0 6530 6491 8 644 244 215 0 0 chrUextra 7803913 7803978 -21200678 + T-rich Low_complexity Low_complexity 1 65 0 8 644 284 48 24 0 chrUextra 7803989 7804031 -21200625 + (TTTTA)n Simple_repeat Simple_repeat 4 46 0 8 644 22 35 0 0 chrUextra 7804130 7804159 -21200497 + AT_rich Low_complexity Low_complexity 1 29 0 8 644 1835 0 0 0 chrUextra 7804495 7804703 -21199953 - BEL_I LTR Pao -5196 208 1 8 644 3166 0 0 0 chrUextra 7804703 7805064 -21199592 - BEL_LTR LTR Pao 0 361 1 8 644 1970 4 0 0 chrUextra 7805064 7805303 -21199353 - TRANSPAC_I LTR Gypsy -345 4245 4007 8 644 6689 15 14 0 chrUextra 7805403 7806210 -21198446 + FW_DM LINE Jockey 3776 4593 -99 8 644 3101 193 18 22 chrUextra 7806310 7807109 -21197547 + SAR_DM Satellite Satellite 378 1172 -300 8 644 1067 15 0 62 chrUextra 7807371 7807515 -21197141 - 5S_DM RNA RNA 0 135 1 8 644 1167 7 0 0 chrUextra 7807746 7807881 -21196775 - 5S_DM RNA RNA 0 135 1 8 644 2396 129 20 24 chrUextra 7808124 7808931 -21195725 + DMSAT6 Satellite Satellite 1 803 -233 8 644 7097 0 0 0 chrUextra 7809031 7809838 -21194818 - Gypsy12_I LTR Gypsy -2276 3270 2464 8 644 2833 199 120 4 chrUextra 7810845 7811652 -21193004 + Gypsy5_I LTR Gypsy 1261 2161 -4348 8 644 6945 0 2 0 chrUextra 7811752 7812559 -21192097 + G_DM LINE Jockey 805 1613 -2733 8 644 3149 71 2 5 chrUextra 7812659 7813100 -21191556 + R1_DM LINE R1 172 611 -4745 8 644 2791 52 3 3 chrUextra 7813100 7813466 -21191190 + R1_DM LINE R1 1103 1468 -3888 8 644 3747 0 0 0 chrUextra 7814473 7814928 -21189728 - ROVER-I_DM LTR Gypsy -6129 455 1 8 644 2975 3 3 0 chrUextra 7814928 7815280 -21189376 - ROVER-LTR_DM LTR Gypsy 0 367 15 8 644 695 57 0 0 chrUextra 7815380 7815485 -21189171 + QUASIMODO_I LTR Gypsy 5623 5727 -333 8 644 2558 102 13 35 chrUextra 7815595 7816048 -21188608 + QUASIMODO_LTR LTR Gypsy 79 658 0 8 644 6971 2 0 0 chrUextra 7816287 7817094 -21187562 - DM1731_I LTR Copia -1513 2463 1657 8 644 2387 192 80 51 chrUextra 7817194 7818000 -21186656 - TAHRE LINE telomeric -5985 8492 7171 8 644 330 0 0 0 chrUextra 7818101 7818141 -21186515 - MAX_I LTR Pao -7874 40 1 8 644 2729 12 0 0 chrUextra 7818141 7818462 -21186194 - MAX_LTR LTR Pao 0 321 1 8 644 1992 152 34 11 chrUextra 7818462 7818908 -21185748 - SAR_DM Satellite Satellite -676 796 341 8 644 3296 35 12 4 chrUextra 7819008 7819815 -21184841 + Transib5 DNA Transib 1279 2132 -869 8 644 6338 32 1 0 chrUextra 7819915 7820722 -21183934 - MDG1_I LTR Gypsy -829 5767 4960 8 644 842 28 0 0 chrUextra 7821731 7821838 -21182818 + G_DM LINE Jockey 4225 4331 -15 8 644 5104 7 2 0 chrUextra 7821945 7822536 -21182120 - LSU-rRNA_Dme rRNA rRNA -7 3893 3302 8 644 6057 0 1 0 chrUextra 7822636 7823326 -21181330 + LSU-rRNA_Dme rRNA rRNA 3210 3900 0 8 644 29 28 0 0 chrUextra 7823398 7823434 -21181222 + AT_rich Low_complexity Low_complexity 1 36 0 8 644 655 142 8 0 chrUextra 7823543 7823663 -21180993 + SAR_DM Satellite Satellite 701 821 -651 8 644 4441 0 0 0 chrUextra 7823663 7824169 -21180487 + TABOR_LTR LTR Gypsy 1 506 0 8 644 1451 6 11 0 chrUextra 7824169 7824350 -21180306 + TABOR_I LTR Gypsy 1 183 -6153 8 644 3162 229 39 19 chrUextra 7824454 7824485 -21180171 + SAR_DM Satellite Satellite 1 33 -2279 8 644 657 53 53 0 chrUextra 7824485 7824580 -21180076 - ARS406_DM Unknown Unknown -164 189 90 8 644 3162 229 39 19 chrUextra 7824580 7826163 -21178493 + SAR_DM Satellite Satellite 34 1743 -569 8 644 951 32 8 0 chrUextra 7826264 7826388 -21178268 + G3_DM LINE Jockey 4459 4583 -22 8 644 23 0 0 0 chrUextra 7826420 7826443 -21178213 + AT_rich Low_complexity Low_complexity 1 23 0 8 644 216 86 0 0 chrUextra 7826459 7826494 -21178162 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 8 644 3955 2 74 0 chrUextra 7827171 7827978 -21176678 - G2_DM LINE Jockey -1943 1159 293 8 644 3072 187 19 23 chrUextra 7828078 7828873 -21175783 + SAR_DM Satellite Satellite 390 1181 -291 8 644 4101 22 10 2 chrUextra 7828985 7829489 -21175167 + R1_DM LINE R1 4849 5356 0 8 644 1906 70 7 0 chrUextra 7829522 7829792 -21174864 + R1_DM LINE R1 1 272 -5084 8 644 6380 17 24 0 chrUextra 7829892 7830699 -21173957 - STALKER4_I LTR Gypsy -2612 3918 3093 8 644 4093 15 11 0 chrUextra 7830799 7831343 -21173313 + STALKER4_I LTR Gypsy 5981 6530 0 8 644 799 61 0 0 chrUextra 7831343 7831458 -21173198 + STALKER4_LTR LTR Gypsy 1 115 -287 8 644 1297 6 0 6 chrUextra 7831440 7831604 -21173052 + BARI_DM DNA Tc1 1408 1570 -158 8 644 1172 125 41 82 chrUextra 7831706 7831976 -21172680 + TART LINE telomeric 3104 3362 -11115 8 644 1224 124 0 28 chrUextra 7831971 7832185 -21172471 + TART LINE telomeric 3683 3890 -10587 8 644 2813 9 0 0 chrUextra 7832185 7832513 -21172143 - PROTOP_A DNA P 0 1105 778 8 644 360 107 0 0 chrUextra 7832892 7832948 -21171708 + DNAREP1_DM LINE Penelope 386 441 -153 8 644 3702 174 23 15 chrUextra 7833526 7834324 -21170332 - SAR_DM Satellite Satellite -300 1172 369 8 644 1154 21 107 0 chrUextra 7834631 7834771 -21169885 + PROTOP_B DNA P 1 155 -998 8 644 3482 77 7 19 chrUextra 7834769 7835234 -21169422 + Gypsy12_I LTR Gypsy 4657 5115 -431 8 644 1068 8 0 0 chrUextra 7835334 7835451 -21169205 - NTS_DM Other Other -123 117 1 8 644 1866 25 17 17 chrUextra 7835451 7835691 -21168965 - NTS_DM Other Other 0 240 1 8 644 1558 15 20 20 chrUextra 7835691 7835894 -21168762 - NTS_DM Other Other 0 240 38 8 644 936 9 0 27 chrUextra 7835894 7836006 -21168650 - NTS_DM Other Other -107 133 25 8 644 565 36 0 12 chrUextra 7836058 7836141 -21168515 - NTS_DM Other Other -39 201 120 8 644 1491 58 16 0 chrUextra 7836754 7836943 -21167713 - PROTOP_B DNA P 0 1153 962 8 644 2332 114 45 26 chrUextra 7837151 7837946 -21166710 - DMSAT6 Satellite Satellite -71 810 1 8 644 7057 1 0 0 chrUextra 7838055 7838855 -21165801 - ROVER-I_DM LTR Gypsy -4191 2393 1594 8 644 7200 12 7 0 chrUextra 7838962 7839768 -21164888 + R1_DM LINE R1 3838 4649 -707 8 644 3545 190 14 22 chrUextra 7839868 7840674 -21163982 + SAR_DM Satellite Satellite 411 1209 -263 8 644 4131 52 2 2 chrUextra 7840774 7841280 -21163376 - R1_DM LINE R1 -3750 1606 1101 8 644 2382 57 0 0 chrUextra 7841279 7841580 -21163076 - R1_DM LINE R1 -4739 617 317 8 644 3917 178 9 8 chrUextra 7841680 7842479 -21162177 - SAR_DM Satellite Satellite -455 1017 218 8 644 1273 24 0 18 chrUextra 7842617 7842784 -21161872 - NTS_DM Other Other -39 201 38 8 644 902 28 0 27 chrUextra 7842784 7842896 -21161760 - NTS_DM Other Other -107 133 25 8 644 1228 61 0 6 chrUextra 7842948 7843113 -21161543 - NTS_DM Other Other -39 201 38 8 644 803 28 0 52 chrUextra 7843113 7843228 -21161428 - NTS_DM Other Other -107 133 25 8 644 252 196 0 19 chrUextra 7843304 7843356 -21161300 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 644 422 151 0 0 chrUextra 7843492 7843565 -21161091 - ARS406_DM Unknown Unknown -280 73 1 8 644 3822 176 10 11 chrUextra 7843500 7844297 -21160359 + SAR_DM Satellite Satellite 221 1016 -456 8 644 2564 89 18 18 chrUextra 7844398 7845202 -21159454 - DMSAT6 Satellite Satellite -37 803 1 8 644 7098 11 42 0 chrUextra 7845304 7846110 -21158546 - Gypsy4_I LTR Gypsy -3648 2640 1801 8 644 912 218 27 9 chrUextra 7846245 7846467 -21158189 - TOM_I LTR Gypsy -3691 2421 2196 8 644 5982 3 0 1 chrUextra 7848022 7848680 -21155976 - DMRT1B LINE R1 -983 4200 3544 8 644 1314 0 0 0 chrUextra 7848682 7848828 -21155828 + (TTGTG)n Simple_repeat Simple_repeat 2 147 0 8 644 213 65 0 0 chrUextra 7849316 7849347 -21155309 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 644 6010 24 24 1 chrUextra 7849834 7850549 -21154107 - PROTOP_B DNA P -426 727 1 8 644 383 167 56 0 chrUextra 7850568 7850640 -21154016 - Gypsy8_I LTR Gypsy -3905 442 367 8 644 6250 40 17 11 chrUextra 7850740 7851546 -21153110 - R1_DM LINE R1 -4124 1232 422 8 644 5301 27 2 2 chrUextra 7851647 7852268 -21152388 + R1_DM LINE R1 3294 3914 -1442 8 644 1292 77 87 11 chrUextra 7852267 7852452 -21152204 + R1_DM LINE R1 268 466 -4890 8 644 6944 14 65 0 chrUextra 7852552 7853358 -21151298 + STALKER4_I LTR Gypsy 3511 4368 -2162 8 644 7097 12 6 0 chrUextra 7853458 7854264 -21150392 + QUASIMODO_I LTR Gypsy 2697 3507 -2553 8 644 573 189 49 8 chrUextra 7854364 7854487 -21150169 - ARS406_DM Unknown Unknown -225 128 1 8 644 3348 174 39 22 chrUextra 7854395 7855170 -21149486 + SAR_DM Satellite Satellite 191 978 -494 8 644 3621 174 24 20 chrUextra 7855270 7856075 -21148581 - SAR_DM Satellite Satellite -470 1002 195 8 644 3480 193 15 22 chrUextra 7856176 7856980 -21147676 + SAR_DM Satellite Satellite 414 1211 -261 8 644 2077 304 21 21 chrUextra 7857084 7857847 -21146809 - Invader1_I LTR Gypsy -1123 2063 1301 8 644 3646 180 25 21 chrUextra 7857990 7858794 -21145862 + SAR_DM Satellite Satellite 209 1015 -457 8 644 7344 5 1 2 chrUextra 7858894 7859700 -21144956 + LSU-rRNA_Dme rRNA rRNA 655 1459 -2441 8 644 264 174 0 0 chrUextra 7859809 7859855 -21144801 - NOMAD_I LTR Gypsy 0 6572 6527 8 644 257 146 0 0 chrUextra 7859998 7860039 -21144617 - DMCR1A LINE CR1 -3686 784 744 8 644 628 139 51 17 chrUextra 7860106 7860314 -21144342 + DMCR1A LINE CR1 365 470 -4000 8 644 2186 21 14 0 chrUextra 7860325 7860606 -21144050 + DOC5_DM LINE Jockey 3979 4263 -419 8 644 493 284 47 47 chrUextra 7861617 7861938 -21142718 - DM297_I LTR Gypsy -3176 2991 2671 8 644 1558 37 19 0 chrUextra 7861764 7861978 -21142678 - TLD2 Unknown Unknown 0 218 1 8 644 306 288 0 0 chrUextra 7861909 7861989 -21142667 - Gypsy_DS LTR Gypsy -4187 3335 3256 8 644 423 300 29 34 chrUextra 7861995 7862315 -21142341 - TIRANT_I LTR Gypsy -3948 3744 3586 8 644 6212 28 0 0 chrUextra 7862518 7863238 -21141418 + R1_DM LINE R1 2249 2968 -2388 8 644 529 71 107 0 chrUextra 7863240 7863324 -21141332 + R1_DM LINE R1 3491 3583 -1773 8 644 2509 113 15 15 chrUextra 7863424 7864206 -21140450 - DMSAT6 Satellite Satellite -71 782 1 8 645 4399 114 6 8 chrUextra 7864333 7865136 -21139520 + BATUMI_I LTR Pao 4179 5035 -2879 8 645 635 67 32 31 chrUextra 7865573 7865687 -21138969 - BATUMI_LTR LTR Pao -152 120 35 8 645 1564 79 0 9 chrUextra 7865687 7865903 -21138753 - BATUMI_I LTR Pao 0 7963 7750 8 645 279 226 245 14 chrUextra 7866144 7866279 -21138377 + DM176_I LTR Gypsy 6008 6174 -246 8 645 1005 71 0 0 chrUextra 7866279 7866405 -21138251 - Copia2_LTR_DM LTR Copia 0 198 73 8 645 4942 9 11 4 chrUextra 7866398 7866948 -21137708 - Copia2_I LTR Copia -1871 2291 1738 8 645 1512 17 0 0 chrUextra 7867048 7867227 -21137429 + (AATAG)n Simple_repeat Simple_repeat 1 179 0 8 645 1196 79 6 0 chrUextra 7867246 7867424 -21137232 + (AATAG)n Simple_repeat Simple_repeat 2 180 0 8 645 1116 91 3 38 chrUextra 7867482 7867854 -21136802 + (AATAG)n Simple_repeat Simple_repeat 1 359 0 8 645 951 69 2 17 chrUextra 7867954 7868760 -21135896 - RSP Satellite Satellite -50 794 1 8 645 3712 179 7 12 chrUextra 7868865 7869636 -21135020 - SAR_DM Satellite Satellite -514 958 192 8 645 721 135 8 0 chrUextra 7869540 7869666 -21134990 + ARS406_DM Unknown Unknown 1 127 -226 8 645 3807 183 15 9 chrUextra 7869769 7870572 -21134084 + SAR_DM Satellite Satellite 246 1053 -419 8 645 2555 32 16 0 chrUextra 7870674 7870985 -21133671 - DIVER2_I LTR Pao 0 4147 3832 8 645 884 82 25 0 chrUextra 7871015 7871137 -21133519 - DIVER2_I LTR Pao -304 3843 3719 8 645 1609 33 0 99 chrUextra 7871114 7871347 -21133309 - DIVER2_I LTR Pao -2572 1575 1366 8 645 7042 24 0 0 chrUextra 7871578 7872383 -21132273 + R1_DM LINE R1 2488 3292 -2064 8 645 1488 22 0 0 chrUextra 7872501 7872681 -21131975 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 645 570 41 0 0 chrUextra 7873392 7873465 -21131191 + (AGATG)n Simple_repeat Simple_repeat 1 73 0 8 645 1620 0 0 0 chrUextra 7873465 7873645 -21131011 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 8 645 1620 0 0 0 chrUextra 7873666 7874196 -21130460 + (AGATG)n Simple_repeat Simple_repeat 1 530 0 8 645 1358 77 0 11 chrUextra 7874296 7874481 -21130175 + BATUMI_I LTR Pao 7781 7963 0 8 645 1827 46 4 40 chrUextra 7874503 7874753 -21129903 + BATUMI_LTR LTR Pao 32 272 0 8 645 774 228 26 10 chrUextra 7874790 7874985 -21129671 - QUASIMODO_I LTR Gypsy -2719 3341 3144 8 645 446 193 149 0 chrUextra 7874988 7875102 -21129554 - QUASIMODO_I LTR Gypsy -3026 3034 2904 8 645 6872 26 4 2 chrUextra 7875202 7876008 -21128648 - R1_DM LINE R1 -1390 3966 3160 8 645 32 0 0 0 chrUextra 7876122 7876154 -21128502 + AT_rich Low_complexity Low_complexity 1 32 0 8 645 3327 52 42 5 chrUextra 7876154 7876583 -21128073 + PROTOP_A DNA P 661 1105 0 8 645 393 340 35 30 chrUextra 7876583 7876778 -21127878 + Gypsy6_I LTR Gypsy 1434 1629 -5383 8 645 2990 32 0 8 chrUextra 7877014 7877391 -21127265 - Invader1_I LTR Gypsy -2335 851 361 8 645 360 0 0 0 chrUextra 7877391 7877430 -21127226 - Invader1_LTR LTR Gypsy -384 39 1 8 645 928 84 0 0 chrUextra 7877923 7878054 -21126602 - Jockey2 LINE Jockey -1879 1549 1419 8 645 767 148 30 61 chrUextra 7878538 7878703 -21125953 - Gypsy5_LTR LTR Gypsy -194 236 77 8 645 7477 0 0 0 chrUextra 7878826 7879625 -21125031 - TIRANT_I LTR Gypsy -6893 799 1 8 645 558 164 9 52 chrUextra 7879734 7879850 -21124806 - Gypsy12_LTR LTR Gypsy -2225 111 1 8 645 444 281 0 0 chrUextra 7879850 7879972 -21124684 - DM297_I LTR Gypsy -2709 3458 3337 8 645 706 104 0 0 chrUextra 7879979 7880075 -21124581 - Gypsy12_I LTR Gypsy -4570 976 881 8 645 1003 142 76 59 chrUextra 7880072 7880391 -21124265 - Gypsy12_I LTR Gypsy -4790 756 366 8 645 996 99 7 0 chrUextra 7880396 7880538 -21124118 - Gypsy12_LTR LTR Gypsy -71 2265 2123 8 645 1290 154 107 0 chrUextra 7880640 7880893 -21123763 + DMRT1B LINE R1 4700 4979 -204 8 645 823 98 0 0 chrUextra 7880905 7881017 -21123639 + DMRT1B LINE R1 5072 5183 0 8 645 1868 126 90 104 chrUextra 7881010 7881443 -21123213 + IDEFIX_LTR LTR Gypsy 73 499 -95 8 645 2510 44 60 0 chrUextra 7882032 7882349 -21122307 - DMRT1C LINE R1 -2 5441 5106 8 645 1906 95 105 28 chrUextra 7882449 7882773 -21121883 - BATUMI_I LTR Pao -7614 349 1 8 645 2061 32 3 88 chrUextra 7882773 7883078 -21121578 - BATUMI_I LTR Pao -679 7284 7006 8 645 943 128 12 6 chrUextra 7883079 7883252 -21121404 + (CAATA)n Simple_repeat Simple_repeat 2 175 0 8 645 25 0 0 0 chrUextra 7883670 7883695 -21120961 + AT_rich Low_complexity Low_complexity 1 25 0 8 645 4762 21 7 10 chrUextra 7884304 7884881 -21119775 - BATUMI_I LTR Pao -962 7001 6427 8 645 1253 31 0 0 chrUextra 7884904 7885064 -21119592 + BATUMI_I LTR Pao 7303 7462 -501 8 645 1074 188 20 18 chrUextra 7885180 7885956 -21118700 - SAR_DM Satellite Satellite -749 777 1 8 645 315 197 26 0 chrUextra 7885893 7885969 -21118687 + XDMR_DM Unknown Unknown 255 332 -28 8 645 25 51 0 0 chrUextra 7886069 7886108 -21118548 + AT_rich Low_complexity Low_complexity 1 39 0 8 645 2387 176 48 28 chrUextra 7886115 7886651 -21118005 + Stalker2_I LTR Gypsy 291 837 -6565 8 645 1985 9 0 0 chrUextra 7886652 7886874 -21117782 + DM176_LTR LTR Gypsy 1 222 -285 8 645 2523 98 29 21 chrUextra 7886974 7887779 -21116877 - DMSAT6 Satellite Satellite -12 810 1 8 645 4045 5 0 0 chrUextra 7887879 7888316 -21116340 + QUASIMODO_LTR LTR Gypsy 222 658 0 8 645 1047 82 0 0 chrUextra 7888316 7888451 -21116205 + STALKER4_LTR LTR Gypsy 253 387 -15 8 645 3699 5 0 2 chrUextra 7888980 7889409 -21115247 + ROO_LTR LTR Pao 1 428 0 8 645 1554 0 0 0 chrUextra 7889409 7889589 -21115067 + ROO_I LTR Pao 1 180 -8076 8 645 2528 42 0 6 chrUextra 7889689 7890025 -21114631 + ROO_I LTR Pao 3528 3861 -4395 8 645 388 100 0 16 chrUextra 7890021 7890082 -21114574 + BATUMI_I LTR Pao 2013 2072 -5891 8 645 2918 47 10 19 chrUextra 7890080 7890494 -21114162 + BATUMI_I LTR Pao 1914 2323 -5640 8 645 3490 181 11 9 chrUextra 7890594 7891399 -21113257 + SAR_DM Satellite Satellite 262 1068 -404 8 645 1586 314 11 9 chrUextra 7891651 7892291 -21112365 + HMSBEAGLE_I LTR Gypsy 1440 2080 -4449 8 645 3003 199 12 20 chrUextra 7892405 7893204 -21111452 + SAR_DM Satellite Satellite 425 1217 -255 8 645 2272 181 59 26 chrUextra 7893309 7894114 -21110542 - SAR_DM Satellite Satellite -481 831 1 8 645 6356 24 32 2 chrUextra 7895119 7895924 -21108732 - R1_DM LINE R1 -1407 3949 3121 8 645 286 54 304 0 chrUextra 7896025 7896081 -21108575 - Stalker2_I LTR Gypsy -7088 314 242 8 645 289 96 0 37 chrUextra 7896255 7896309 -21108347 - Stalker2_I LTR Gypsy -7350 52 1 8 645 330 25 0 0 chrUextra 7896309 7896336 -21108320 - STALKER4_I LTR Gypsy -6503 27 1 8 645 3449 2 0 2 chrUextra 7896336 7896739 -21107917 - STALKER4_LTR LTR Gypsy 0 402 1 8 645 582 100 0 0 chrUextra 7896739 7896828 -21107828 + ROVER-I_DM LTR Gypsy 5110 5198 -1386 8 645 5629 62 33 6 chrUextra 7896929 7897718 -21106938 + TART_B1 LINE telomeric 2964 3773 -6881 8 645 238 303 12 18 chrUextra 7898055 7898223 -21106433 + (TTTA)n Simple_repeat Simple_repeat 2 168 0 8 645 265 240 23 76 chrUextra 7898342 7898473 -21106183 - ROVER-I_DM LTR Gypsy -6460 124 1 8 645 391 113 0 27 chrUextra 7898473 7898537 -21106119 - DMTOM1_LTR LTR Gypsy 0 410 349 8 645 483 150 10 20 chrUextra 7898537 7898639 -21106017 - DMTOM1_LTR LTR Gypsy 0 410 310 8 645 39 50 0 0 chrUextra 7899022 7899082 -21105574 + AT_rich Low_complexity Low_complexity 1 60 0 8 645 2927 57 0 9 chrUextra 7899644 7900058 -21104598 + IDEFIX_I LTR Gypsy 3250 3659 -1969 8 645 2187 129 10 26 chrUextra 7900058 7900448 -21104208 + GTWIN_LTR LTR Gypsy 1 384 -111 8 645 6576 12 0 0 chrUextra 7900549 7901354 -21103302 - QUASIMODO_I LTR Gypsy -4577 1483 679 8 645 6389 41 0 1 chrUextra 7901454 7902259 -21102397 + BATUMI_I LTR Pao 4396 5199 -2764 8 645 5606 32 1 23 chrUextra 7902360 7902807 -21101849 - DM176_I LTR Gypsy -5448 972 529 8 645 181 30 29 57 chrUextra 7902807 7902842 -21101814 + (TTA)n Simple_repeat Simple_repeat 3 36 0 8 645 5606 32 1 23 chrUextra 7902842 7903164 -21101492 - DM176_I LTR Gypsy -5892 528 220 8 645 3391 179 11 15 chrUextra 7903269 7904069 -21100587 + SAR_DM Satellite Satellite 212 1008 -464 8 645 1583 0 0 0 chrUextra 7904169 7904350 -21100306 + Gypsy3_I LTR Gypsy 5997 6177 0 8 645 2629 19 102 60 chrUextra 7904350 7904732 -21099924 + Gypsy3_LTR LTR Gypsy 1 398 0 8 645 2050 0 0 0 chrUextra 7904732 7904974 -21099682 + Gypsy3_I LTR Gypsy 1 242 -5935 8 645 1620 14 0 7 chrUextra 7905504 7905797 -21098859 + (GAGAA)n Simple_repeat Simple_repeat 1 291 0 8 645 4802 51 19 67 chrUextra 7905979 7906784 -21097872 + BATUMI_I LTR Pao 679 1444 -6519 8 645 6368 13 6 14 chrUextra 7906885 7907689 -21096967 + PROTOP_A DNA P 302 1099 -6 8 645 265 337 29 33 chrUextra 7908314 7908587 -21096069 - Gypsy6_I LTR Gypsy -5228 1784 1513 8 645 2754 191 18 11 chrUextra 7908694 7909496 -21095160 + SAR_DM Satellite Satellite 195 1248 -224 8 645 6444 4 0 0 chrUextra 7909599 7910339 -21094317 - LSU-rRNA_Dme rRNA rRNA -1373 2527 1788 8 645 782 11 0 0 chrUextra 7910504 7910595 -21094061 - NTS_DM Other Other -149 91 1 8 645 1756 17 17 17 chrUextra 7910595 7910835 -21093821 - NTS_DM Other Other 0 240 1 8 645 1734 21 17 17 chrUextra 7910835 7911075 -21093581 - NTS_DM Other Other 0 240 1 8 645 1679 22 17 17 chrUextra 7911075 7911309 -21093347 - NTS_DM Other Other 0 240 7 8 645 3496 213 44 17 chrUextra 7911409 7913119 -21091537 - SAR_DM Satellite Satellite -484 1755 1 8 645 4086 7 2 11 chrUextra 7913219 7913765 -21090891 + STALKER4_I LTR Gypsy 5979 6519 -11 8 645 2124 11 11 4 chrUextra 7913760 7914024 -21090632 + STALKER4_LTR LTR Gypsy 76 341 -61 8 645 6078 39 60 0 chrUextra 7914124 7914929 -21089727 + ROO_I LTR Pao 2012 2864 -5392 8 645 4863 110 15 1 chrUextra 7915030 7915774 -21088882 - Gypsy_I LTR Gypsy -291 6216 5463 8 645 231 139 0 0 chrUextra 7915775 7915818 -21088838 + G6_DM LINE Jockey 1 43 -1999 8 645 3528 42 135 1 chrUextra 7915934 7916739 -21087917 + R1_DM LINE R1 979 1891 -3465 8 645 1714 24 5 0 chrUextra 7916839 7917049 -21087607 - DMCR1A LINE CR1 -1345 3125 2915 8 645 4486 33 23 2 chrUextra 7917069 7917644 -21087012 - DMCR1A LINE CR1 -3067 1403 817 8 645 1420 69 60 8 chrUextra 7917744 7917978 -21086678 - DMCR1A LINE CR1 -4220 250 5 8 645 2607 108 170 0 chrUextra 7918002 7918549 -21086107 - DM297_I LTR Gypsy -4616 1551 912 8 645 2655 3 18 0 chrUextra 7918649 7918976 -21085680 + Invader3_I LTR Gypsy 4556 4888 0 8 645 2377 7 42 0 chrUextra 7918976 7919262 -21085394 + Invader3_LTR LTR Gypsy 1 298 0 8 645 1611 5 0 5 chrUextra 7919262 7919454 -21085202 + Invader3_I LTR Gypsy 1 191 -4697 8 645 3220 205 64 8 chrUextra 7919555 7920357 -21084299 - TAHRE LINE telomeric -8790 1673 827 8 645 1704 72 4 0 chrUextra 7920459 7920708 -21083948 - TRANSIB4 DNA Transib -2291 319 70 8 645 312 211 0 0 chrUextra 7920780 7920856 -21083800 - Gypsy_I LTR Gypsy -3 6504 6429 8 645 554 159 86 16 chrUextra 7920889 7921017 -21083639 + DNAREP1_DM LINE Penelope 432 568 -26 8 645 6270 31 19 1 chrUextra 7921362 7922166 -21082490 + DMRT1B LINE R1 2821 3638 -1545 8 645 4396 21 25 2 chrUextra 7922266 7922830 -21081826 - IDEFIX_LTR LTR Gypsy -17 577 1 8 645 241 105 0 0 chrUextra 7922798 7922836 -21081820 + BARI1 DNA Tc1 3 40 -1710 8 645 2562 48 9 0 chrUextra 7924327 7924659 -21079997 - DMRT1A LINE R1 -12 5171 4837 8 645 1837 18 0 0 chrUextra 7924658 7924878 -21079778 + Transib5 DNA Transib 962 1181 -1820 8 645 315 250 117 0 chrUextra 7924984 7925112 -21079544 - OSVALDO_I LTR Gypsy -4633 2020 1878 8 645 318 118 188 14 chrUextra 7925094 7925163 -21079493 - Gypsy8_I LTR Gypsy -3330 1017 937 8 645 1403 88 15 0 chrUextra 7925158 7925362 -21079294 - Gypsy8_I LTR Gypsy -3867 480 274 8 645 1801 78 26 48 chrUextra 7925360 7925778 -21078878 + DMSAT6 Satellite Satellite 10 418 -52 8 645 436 155 0 0 chrUextra 7926188 7926259 -21078397 - TAHRE LINE telomeric -2867 7596 7526 8 645 339 236 39 39 chrUextra 7926530 7926658 -21077998 - Copia_I LTR Copia -2314 2279 2152 8 645 30 0 0 0 chrUextra 7926831 7926861 -21077795 + AT_rich Low_complexity Low_complexity 1 30 0 8 645 1210 91 10 24 chrUextra 7926955 7927554 -21077102 + (TA)n Simple_repeat Simple_repeat 1 590 0 8 645 3064 196 12 19 chrUextra 7927690 7928494 -21076162 - SAR_DM Satellite Satellite -259 1213 415 8 645 6721 6 1 0 chrUextra 7928594 7929398 -21075258 + G6_DM LINE Jockey 1191 1995 -47 8 645 798 208 72 10 chrUextra 7929498 7929707 -21074949 - HETA LINE telomeric -1840 4241 4020 8 645 22 56 0 0 chrUextra 7929857 7929893 -21074763 + AT_rich Low_complexity Low_complexity 1 36 0 8 645 322 178 50 101 chrUextra 7929938 7930057 -21074599 + Copia_I LTR Copia 4401 4513 -80 8 645 201 162 0 0 chrUextra 7930413 7930450 -21074206 + A-rich Low_complexity Low_complexity 1 37 0 8 645 5891 36 4 1 chrUextra 7930451 7931206 -21073450 - R1_DM LINE R1 -3966 1390 634 8 645 6848 6 1 1 chrUextra 7931306 7932110 -21072546 + DMRT1A LINE R1 4225 5028 -155 8 645 5816 55 53 1 chrUextra 7932210 7933014 -21071642 + TART LINE telomeric 30 875 -13602 8 645 297 330 24 34 chrUextra 7933337 7933648 -21071008 - Gypsy3_I LTR Gypsy -5231 1781 1219 8 645 310 312 14 14 chrUextra 7933649 7933807 -21070849 - Gypsy2_I LTR Gypsy -4643 1492 1218 8 645 2265 108 10 24 chrUextra 7934023 7934822 -21069834 + DMSAT6 Satellite Satellite 1 787 -151 8 645 6452 30 1 2 chrUextra 7934922 7935726 -21068930 + R1_DM LINE R1 3757 4559 -797 8 645 3278 197 13 26 chrUextra 7935826 7936630 -21068026 - SAR_DM Satellite Satellite -372 793 1 8 645 6622 29 0 0 chrUextra 7936730 7937534 -21067122 - DIVER_I LTR Pao -3914 1729 926 8 645 4232 64 69 42 chrUextra 7937789 7938438 -21066218 - CIRCE LINE Composite -5386 970 304 8 645 1669 0 0 0 chrUextra 7938538 7938729 -21065927 - R2_DM LINE R2 -2374 1233 1043 8 645 5362 5 0 0 chrUextra 7938722 7939342 -21065314 - LSU-rRNA_Dme rRNA rRNA -1316 2584 1965 8 645 1080 21 107 0 chrUextra 7940775 7940915 -21063741 + PROTOP_B DNA P 1 155 -998 8 645 1747 81 0 0 chrUextra 7940913 7941149 -21063507 + Gypsy12_I LTR Gypsy 4657 4892 -654 8 645 5657 50 47 0 chrUextra 7941250 7942054 -21062602 - IDEFIX_I LTR Gypsy -1028 4600 3759 8 645 6556 17 6 1 chrUextra 7942154 7942958 -21061698 + R1_DM LINE R1 3447 4254 -1102 8 645 454 33 16 0 chrUextra 7943058 7943119 -21061537 - Gypsy4_I LTR Gypsy -3022 3266 3205 8 645 3324 20 8 0 chrUextra 7943110 7943507 -21061149 - Gypsy4_I LTR Gypsy -3599 2689 2290 8 645 2649 12 66 0 chrUextra 7943507 7943655 -21061001 - Stalker3_LTR LTR Gypsy 0 372 225 8 645 207 0 0 0 chrUextra 7943655 7943678 -21060978 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 645 2649 12 66 0 chrUextra 7943678 7943862 -21060794 - Stalker3_LTR LTR Gypsy -148 224 19 8 645 1352 62 5 10 chrUextra 7943962 7944156 -21060500 + BATUMI_I LTR Pao 7771 7963 0 8 645 1752 42 4 28 chrUextra 7944178 7944425 -21060231 + BATUMI_LTR LTR Pao 32 272 0 8 645 37 0 0 0 chrUextra 7944425 7944462 -21060194 + AT_rich Low_complexity Low_complexity 1 37 0 8 645 2081 16 4 0 chrUextra 7944517 7944766 -21059890 - PROTOP DNA P -1 4479 4230 8 645 5754 22 23 8 chrUextra 7944866 7945215 -21059441 + DM176_I LTR Gypsy 147 501 -5919 8 645 181 30 29 57 chrUextra 7945215 7945250 -21059406 + (TAA)n Simple_repeat Simple_repeat 3 36 0 8 645 5754 22 23 8 chrUextra 7945250 7945670 -21058986 + DM176_I LTR Gypsy 502 928 -5492 8 645 2777 151 18 21 chrUextra 7945770 7946569 -21058087 + SAR_DM Satellite Satellite 1 797 -500 8 645 924 75 0 45 chrUextra 7946417 7946571 -21058085 - ARS406_DM Unknown Unknown -164 189 43 8 645 6968 4 1 0 chrUextra 7946674 7947478 -21057178 - CIRCE LINE Composite -5482 874 70 8 645 2732 59 94 3 chrUextra 7947578 7948164 -21056492 - PROTOP_A DNA P -81 1024 522 8 645 1637 59 9 0 chrUextra 7948154 7948375 -21056281 - PROTOP DNA P -4184 296 74 8 645 5491 62 5 7 chrUextra 7948528 7949286 -21055370 + R1_DM LINE R1 23 779 -4577 8 645 2161 4 0 4 chrUextra 7949386 7949638 -21055018 + R1_DM LINE R1 5106 5356 0 8 645 2717 13 0 0 chrUextra 7949648 7949966 -21054690 + R1_DM LINE R1 5039 5356 0 8 645 1819 9 0 0 chrUextra 7949976 7950190 -21054466 + R1_DM LINE R1 5039 5252 -104 8 645 2700 207 14 12 chrUextra 7950292 7951092 -21053564 - SAR_DM Satellite Satellite -689 801 1 8 645 4888 2 0 2 chrUextra 7951194 7951757 -21052899 - LSU-rRNA_Dme rRNA rRNA -699 3201 2640 8 645 1885 5 0 0 chrUextra 7951779 7951998 -21052658 - R1_DM LINE R1 -8 5348 5130 8 645 305 279 107 89 chrUextra 7952221 7952501 -21052155 - Invader1_LTR LTR Gypsy -55 368 84 8 645 813 180 109 16 chrUextra 7952710 7952902 -21051754 + DMLTR5 LTR Gypsy 44 253 -13 8 645 2896 14 0 0 chrUextra 7953004 7953348 -21051308 - MDG1_LTR LTR Gypsy -12 430 87 8 645 423 100 0 0 chrUextra 7953348 7953418 -21051238 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 645 3371 174 10 18 chrUextra 7953907 7954701 -21049955 + SAR_DM Satellite Satellite 332 1119 -353 8 645 270 188 16 0 chrUextra 7954646 7954710 -21049946 - XDMR Unknown Unknown 0 361 297 8 645 6956 4 1 0 chrUextra 7954810 7955614 -21049042 + Gypsy6_I LTR Gypsy 1910 2714 -4298 8 645 316 0 0 0 chrUextra 7955714 7955756 -21048900 + Copia_I LTR Copia 4552 4593 0 8 645 2286 4 0 0 chrUextra 7955756 7956032 -21048624 + Copia_LTR LTR Copia 1 276 0 8 645 3973 8 2 0 chrUextra 7956032 7956518 -21048138 + STALKER4_I LTR Gypsy 3262 3748 -2782 8 645 5178 15 2 0 chrUextra 7956619 7957236 -21047420 + R1_DM LINE R1 1639 2256 -3100 8 645 1586 5 0 0 chrUextra 7957234 7957422 -21047234 - MICROPIA_I LTR Gypsy -3172 1304 1117 8 645 2389 90 37 22 chrUextra 7957522 7958302 -21046354 + DMSAT6 Satellite Satellite 1 792 -104 8 645 493 0 43 0 chrUextra 7959159 7959228 -21045428 - ALUII_DM Unknown Unknown 0 240 169 8 645 2028 186 14 20 chrUextra 7959331 7960131 -21044525 + SAR_DM Satellite Satellite 1 795 -677 8 645 1863 111 154 46 chrUextra 7960231 7960771 -21043885 - BATUMI_I LTR Pao -7239 724 127 8 645 1733 31 0 22 chrUextra 7960804 7961033 -21043623 - BATUMI_I LTR Pao -679 7284 7061 8 645 3199 189 11 10 chrUextra 7961134 7961929 -21042727 - SAR_DM Satellite Satellite -485 987 192 8 645 2151 148 158 17 chrUextra 7962048 7962572 -21042084 - TART LINE telomeric -4201 10276 9679 8 645 2194 19 4 8 chrUextra 7962572 7962840 -21041816 + PROTOP_A DNA P 1 267 -838 8 645 3193 54 42 26 chrUextra 7962940 7963397 -21041259 + CIRCE LINE Composite 2326 2789 -3567 8 645 829 76 0 0 chrUextra 7963413 7963531 -21041125 + CIRCE LINE Composite 4863 4980 -1376 8 645 3658 9 2 0 chrUextra 7963843 7964276 -21040380 + DOC2_DM LINE Jockey 2075 2508 -2285 8 645 3145 13 0 0 chrUextra 7964274 7964646 -21040010 + DOC2_DM LINE Jockey 3436 3807 -986 8 645 355 109 0 0 chrUextra 7964749 7964804 -21039852 + ARS406_DM Unknown Unknown 135 189 -164 8 645 3390 168 18 25 chrUextra 7964756 7965549 -21039107 - SAR_DM Satellite Satellite -257 1215 429 8 645 2312 116 19 19 chrUextra 7965649 7966433 -21038223 - DMSAT6 Satellite Satellite -71 784 1 8 645 5289 32 9 2 chrUextra 7966552 7967355 -21037301 + TART LINE telomeric 13462 14073 -404 8 645 4099 74 57 25 chrUextra 7967455 7968247 -21036409 - PROTOP DNA P -261 844 48 8 645 563 133 19 19 chrUextra 7968692 7968799 -21035857 + DNAREP1_DM LINE Penelope 2 108 -486 8 645 839 3 0 99 chrUextra 7968815 7969158 -21035498 + (TGAA)n Simple_repeat Simple_repeat 1 308 0 8 645 6614 21 4 0 chrUextra 7969261 7970064 -21034592 - R1_DM LINE R1 -1641 3715 2910 8 645 257 59 0 0 chrUextra 7970164 7970198 -21034458 + ARS406_DM Unknown Unknown 156 189 -164 8 645 3073 192 14 20 chrUextra 7970174 7970966 -21033690 - SAR_DM Satellite Satellite -281 1191 405 8 645 1158 137 0 43 chrUextra 7971067 7971648 -21033008 + (TA)n Simple_repeat Simple_repeat 1 556 0 8 645 581 128 0 67 chrUextra 7971677 7971870 -21032786 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 645 2281 0 0 0 chrUextra 7971970 7972232 -21032424 + LSU-rRNA_Dme rRNA rRNA 3639 3900 0 8 645 27 29 0 0 chrUextra 7972304 7972338 -21032318 + AT_rich Low_complexity Low_complexity 1 34 0 8 645 22 56 0 0 chrUextra 7972402 7972438 -21032218 + AT_rich Low_complexity Low_complexity 1 36 0 8 645 246 150 0 0 chrUextra 7972443 7972483 -21032173 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 645 246 150 0 0 chrUextra 7972535 7972575 -21032081 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 645 255 125 0 0 chrUextra 7972618 7972658 -21031998 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 645 22 56 0 0 chrUextra 7972671 7972707 -21031949 + AT_rich Low_complexity Low_complexity 1 36 0 8 645 285 0 0 75 chrUextra 7972733 7972773 -21031883 + NTS_DM Other Other 25 61 -179 8 645 35 0 0 0 chrUextra 7973115 7973150 -21031506 + AT_rich Low_complexity Low_complexity 1 35 0 8 645 25 0 0 0 chrUextra 7973583 7973608 -21031048 + AT_rich Low_complexity Low_complexity 1 25 0 8 645 2448 205 37 20 chrUextra 7973776 7974578 -21030078 + SAR_DM Satellite Satellite 1 815 -242 8 645 5878 65 6 2 chrUextra 7974679 7975482 -21029174 + STALKER4_I LTR Gypsy 367 1172 -5358 8 645 6376 39 0 4 chrUextra 7975582 7976385 -21028271 - MAX_I LTR Pao -4839 3075 2276 8 645 306 227 93 0 chrUextra 7976488 7976585 -21028071 + GTWIN_LTR LTR Gypsy 300 405 -90 8 645 26 88 0 0 chrUextra 7976863 7976931 -21027725 + AT_rich Low_complexity Low_complexity 1 68 0 8 645 334 210 151 12 chrUextra 7977101 7977238 -21027418 + Gypsy_I LTR Gypsy 435 605 -5902 8 645 2795 37 125 0 chrUextra 7977388 7978191 -21026465 + DOC3_DM LINE Jockey 3382 4284 -456 8 645 3387 172 14 19 chrUextra 7978291 7979084 -21025572 - SAR_DM Satellite Satellite -315 1157 369 8 645 2230 11 0 4 chrUextra 7979194 7979470 -21025186 - PROTOP_A DNA P -586 519 245 8 645 4403 4 0 0 chrUextra 7979470 7979976 -21024680 - TABOR_LTR LTR Gypsy 0 506 1 8 645 6974 0 1 0 chrUextra 7980099 7980898 -21023758 - NOMAD_I LTR Gypsy -3102 3470 2671 8 645 240 175 117 58 chrUextra 7981144 7981247 -21023409 - Gypsy2_LTR LTR Gypsy -150 203 95 8 645 233 286 0 0 chrUextra 7981261 7981331 -21023325 - Gypsy2_I LTR Gypsy -91 6044 5975 8 645 359 211 0 0 chrUextra 7981340 7981416 -21023240 - Gypsy3_I LTR Gypsy -172 6005 5930 8 645 1598 276 10 2 chrUextra 7981382 7981799 -21022857 - Gypsy2_I LTR Gypsy -174 5961 5542 8 645 323 291 39 8 chrUextra 7982212 7982340 -21022316 + Copia2_I LTR Copia 567 698 -3464 8 645 369 0 0 0 chrUextra 7982347 7982392 -21022264 + Copia2_LTR_DM LTR Copia 154 198 0 8 645 2622 13 0 0 chrUextra 7982392 7982706 -21021950 + Copia2_I LTR Copia 1 314 -3848 8 645 2450 122 38 17 chrUextra 7982809 7983606 -21021050 + DMSAT6 Satellite Satellite 1 813 -151 8 645 714 116 0 0 chrUextra 7983709 7983830 -21020826 - ARS406_DM Unknown Unknown -232 121 1 8 645 3208 178 10 13 chrUextra 7983734 7984503 -21020153 + SAR_DM Satellite Satellite 192 958 -514 8 645 2831 195 42 21 chrUextra 7984613 7985401 -21019255 + SAR_DM Satellite Satellite 1 804 -208 8 645 379 91 0 15 chrUextra 7985348 7985415 -21019241 - ARS406_DM Unknown Unknown -238 115 50 8 645 488 60 95 0 chrUextra 7985527 7985611 -21019045 + MAX_I LTR Pao 824 915 -6999 8 645 298 0 0 0 chrUextra 7985725 7985761 -21018895 + MAX_I LTR Pao 920 955 -6959 8 645 815 164 87 156 chrUextra 7985800 7986248 -21018408 + MAX_I LTR Pao 938 1354 -6560 8 645 1383 12 0 6 chrUextra 7986418 7986590 -21018066 + MICROPIA_I LTR Gypsy 4306 4476 0 8 645 3877 11 0 61 chrUextra 7986590 7987097 -21017559 + MICROPIA_LTR LTR Gypsy 1 476 0 8 645 978 26 0 0 chrUextra 7987105 7987221 -21017435 + Invader1_LTR LTR Gypsy 1 116 -307 8 645 2177 8 0 4 chrUextra 7987321 7987588 -21017068 + MICROPIA_I LTR Gypsy 4211 4476 0 8 645 3888 6 0 61 chrUextra 7987588 7988093 -21016563 + MICROPIA_LTR LTR Gypsy 1 474 -2 8 645 5826 81 0 11 chrUextra 7988224 7989027 -21015629 - Gypsy12_I LTR Gypsy -241 5305 4512 8 645 2854 115 59 28 chrUextra 7989127 7989656 -21015000 - DMHMR2 Unknown Unknown -9 1203 659 8 645 1520 151 33 0 chrUextra 7989655 7989927 -21014729 - TAHRE LINE telomeric -8452 2011 1731 8 645 3285 168 19 28 chrUextra 7990030 7990830 -21013826 + SAR_DM Satellite Satellite 380 1172 -300 8 645 2086 12 31 4 chrUextra 7990933 7991190 -21013466 - BATUMI_I LTR Pao -7699 264 1 8 645 1861 21 28 83 chrUextra 7991190 7991478 -21013178 - BATUMI_LTR LTR Pao 0 272 1 8 645 21 0 0 0 chrUextra 7991615 7991636 -21013020 + AT_rich Low_complexity Low_complexity 1 21 0 8 645 6414 30 36 0 chrUextra 7991836 7992639 -21012017 - R1_DM LINE R1 -428 4928 4097 8 645 3192 122 96 75 chrUextra 7992739 7993542 -21011114 + PROTOP_B DNA P 292 1111 -42 8 645 6265 47 1 0 chrUextra 7994545 7995347 -21009309 + DMRT1B LINE R1 2874 3676 -1507 8 646 3674 51 2 0 chrUextra 7996349 7996820 -21007836 - Baggins1 LINE LOA -191 5262 4791 8 646 1267 58 0 17 chrUextra 7996976 7997151 -21007505 - R1_DM LINE R1 -3113 2243 2072 8 646 6382 35 1 4 chrUextra 7997251 7998048 -21006608 + BATUMI_I LTR Pao 4381 5175 -2788 8 646 2443 109 14 12 chrUextra 7998153 7998949 -21005707 - DMSAT6 Satellite Satellite -236 797 1 8 646 2680 3 0 6 chrUextra 7999055 7999369 -21005287 - ROO_LTR LTR Pao -116 312 1 8 646 4168 2 0 2 chrUextra 7999369 7999854 -21004802 - ROO_I LTR Pao -5437 2819 2336 8 646 1733 192 120 42 chrUextra 8000010 8000587 -21004069 + HETA LINE telomeric 5102 5723 -358 8 646 518 108 81 0 chrUextra 8000587 8000698 -21003958 + TART LINE telomeric 10370 10489 -3988 8 646 34 24 0 0 chrUextra 8000711 8000752 -21003904 + AT_rich Low_complexity Low_complexity 1 41 0 8 646 6423 21 8 0 chrUextra 8000859 8001661 -21002995 + ROO_I LTR Pao 3644 4451 -3805 8 646 294 297 104 86 chrUextra 8002166 8002446 -21002210 - Invader1_LTR LTR Gypsy -55 368 84 8 646 834 163 0 0 chrUextra 8003128 8003382 -21001274 + (AGATG)n Simple_repeat Simple_repeat 1 254 0 8 646 678 297 51 53 chrUextra 8003566 8003753 -21000903 + Gypsy4_I LTR Gypsy 2431 2766 -3654 8 646 1487 28 19 0 chrUextra 8003753 8003967 -21000689 + TLD2 Unknown Unknown 1 218 0 8 646 678 297 51 53 chrUextra 8003967 8004367 -21000289 + Gypsy4_I LTR Gypsy 2767 3490 -2930 8 646 3274 0 0 0 chrUextra 8004467 8004838 -20999818 - ROO_LTR LTR Pao -57 371 1 8 646 2573 153 0 0 chrUextra 8004838 8005269 -20999387 + Gypsy3_I LTR Gypsy 4940 5370 -807 8 646 1096 29 0 0 chrUextra 8005369 8005508 -20999148 - G5_DM LINE Jockey -116 4740 4602 8 646 2742 53 59 0 chrUextra 8005505 8005879 -20998777 - G5_DM LINE Jockey -489 4367 3972 8 646 21 0 0 0 chrUextra 8005910 8005931 -20998725 + AT_rich Low_complexity Low_complexity 1 21 0 8 646 2277 176 6 9 chrUextra 8006273 8007073 -20997583 - SAR_DM Satellite Satellite -464 798 1 8 646 4274 20 7 11 chrUextra 8007173 8007723 -20996933 + BATUMI_I LTR Pao 6454 7001 -962 8 646 2147 269 26 36 chrUextra 8007174 8007975 -20996681 - MAX_I LTR Pao -684 7230 6438 8 646 1041 8 0 0 chrUextra 8008075 8008204 -20996452 - STALKER4_LTR LTR Gypsy -273 129 1 8 646 4942 21 45 0 chrUextra 8008204 8008877 -20995779 - STALKER4_I LTR Gypsy 0 6530 5828 8 646 6744 9 0 6 chrUextra 8009879 8010681 -20993975 - DMRT1B LINE R1 -1665 3518 2722 8 646 3147 184 14 22 chrUextra 8010784 8011567 -20993089 + SAR_DM Satellite Satellite 405 1181 -291 8 646 1915 0 4 0 chrUextra 8011683 8011916 -20992740 + Copia_LTR LTR Copia 43 276 0 8 646 4814 0 0 2 chrUextra 8011916 8012483 -20992173 - MDG3_I LTR Gypsy -343 4643 4078 8 646 3061 191 20 24 chrUextra 8012586 8013387 -20991269 - SAR_DM Satellite Satellite -261 1211 414 8 646 3755 18 0 0 chrUextra 8013487 8013935 -20990721 + NINJA_I LTR Pao 3454 3901 -2110 8 646 2861 23 0 0 chrUextra 8013936 8014289 -20990367 + NINJA_I LTR Pao 4175 4527 -1484 8 646 1252 18 0 6 chrUextra 8014392 8014557 -20990099 + NTS_DM Other Other 38 201 -39 8 646 870 9 0 27 chrUextra 8014609 8014721 -20989935 + NTS_DM Other Other 25 133 -107 8 646 1417 20 20 20 chrUextra 8014721 8014924 -20989732 + NTS_DM Other Other 38 240 0 8 646 1642 38 17 21 chrUextra 8014924 8015165 -20989491 + NTS_DM Other Other 1 240 0 8 646 2331 187 10 2 chrUextra 8015291 8016092 -20988564 - SAR_DM Satellite Satellite -667 806 1 8 646 4513 22 55 0 chrUextra 8016193 8016995 -20987661 - FW_DM LINE Jockey -1049 3643 2798 8 646 2362 93 29 24 chrUextra 8017099 8017895 -20986761 - DMSAT6 Satellite Satellite -32 799 1 8 646 6579 19 9 0 chrUextra 8017997 8018799 -20985857 - Copia2_I LTR Copia -1060 3102 2294 8 646 425 254 7 7 chrUextra 8018900 8019043 -20985613 + IDEFIX_I LTR Gypsy 375 517 -5111 8 646 501 259 169 6 chrUextra 8019073 8019399 -20985257 + IDEFIX_I LTR Gypsy 676 1054 -4574 8 646 446 30 72 43 chrUextra 8019416 8019485 -20985171 + DOC3_DM LINE Jockey 1 71 -4669 8 646 1605 46 5 0 chrUextra 8019483 8019700 -20984956 + DOC3_DM LINE Jockey 643 860 -3880 8 646 5118 3 2 0 chrUextra 8019801 8020394 -20984262 - ROO_I LTR Pao -675 7581 6988 8 646 1806 14 0 0 chrUextra 8020381 8020603 -20984053 - ROO_I LTR Pao -3060 5196 4975 8 646 6552 26 0 0 chrUextra 8020703 8021505 -20983151 - R1_DM LINE R1 -2175 3181 2380 8 646 6800 5 0 0 chrUextra 8021605 8022407 -20982249 - DOC LINE Jockey -3287 1438 637 8 646 4315 102 90 18 chrUextra 8022507 8023309 -20981347 + TART LINE telomeric 9281 10140 -4337 8 646 6348 42 1 1 chrUextra 8023409 8024211 -20980445 - R1_DM LINE R1 -3456 1900 1099 8 646 2784 184 9 9 chrUextra 8024311 8025112 -20979544 - SAR_DM Satellite Satellite -732 801 1 8 646 518 108 81 0 chrUextra 8025347 8025458 -20979198 + TART LINE telomeric 10370 10489 -3988 8 646 27 49 0 0 chrUextra 8025471 8025512 -20979144 + AT_rich Low_complexity Low_complexity 1 41 0 8 646 5097 70 12 2 chrUextra 8026113 8026897 -20977759 - DMRT1A LINE R1 -3277 1906 1075 8 646 766 109 0 0 chrUextra 8027014 8027142 -20977514 - ARS406_DM Unknown Unknown -225 128 1 8 646 3263 172 12 13 chrUextra 8027049 8027814 -20976842 + SAR_DM Satellite Satellite 195 958 -514 8 646 561 291 25 20 chrUextra 8027915 8028291 -20976365 + Gypsy6_I LTR Gypsy 5178 5318 -1694 8 646 870 9 0 27 chrUextra 8028822 8028934 -20975722 - NTS_DM Other Other -107 133 25 8 646 1252 18 0 6 chrUextra 8028986 8029151 -20975505 - NTS_DM Other Other -39 201 38 8 646 870 9 0 27 chrUextra 8029151 8029263 -20975393 - NTS_DM Other Other -107 133 25 8 646 22 56 0 0 chrUextra 8029289 8029325 -20975331 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 255 125 0 0 chrUextra 8029338 8029378 -20975278 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 246 150 0 0 chrUextra 8029421 8029461 -20975195 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 6832 10 2 0 chrUextra 8029717 8030518 -20974138 - Copia2_I LTR Copia -830 3332 2530 8 646 6668 8 1 1 chrUextra 8030618 8031419 -20973237 + LSU-rRNA_Dme rRNA rRNA 470 1270 -2630 8 646 4254 47 69 3 chrUextra 8031519 8032113 -20972543 - DIVER2_I LTR Pao -1689 2458 1826 8 646 796 185 10 58 chrUextra 8032113 8032320 -20972336 + Gypsy5_LTR LTR Gypsy 1 197 -233 8 646 6452 11 26 0 chrUextra 8032420 8033221 -20971435 + STALKER4_I LTR Gypsy 2230 3051 -3479 8 646 22 56 0 0 chrUextra 8033342 8033378 -20971278 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 255 125 0 0 chrUextra 8033391 8033431 -20971225 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 246 150 0 0 chrUextra 8033474 8033514 -20971142 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 246 150 0 0 chrUextra 8033557 8033597 -20971059 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 27 29 0 0 chrUextra 8033691 8033725 -20970931 + AT_rich Low_complexity Low_complexity 1 34 0 8 646 2844 0 0 0 chrUextra 8033797 8034122 -20970534 - LSU-rRNA_Dme rRNA rRNA 0 3900 3576 8 646 39 50 0 0 chrUextra 8035430 8035490 -20969166 + AT_rich Low_complexity Low_complexity 1 60 0 8 646 26 50 0 0 chrUextra 8035661 8035701 -20968955 + AT_rich Low_complexity Low_complexity 1 40 0 8 646 1480 43 0 0 chrUextra 8035736 8035924 -20968732 + ROO_LTR LTR Pao 1 188 -240 8 646 4799 10 7 2 chrUextra 8036024 8036607 -20968049 - FW_DM LINE Jockey -2612 2080 1495 8 646 1757 9 5 18 chrUextra 8036607 8036825 -20967831 + ACCORD2_LTR LTR Gypsy 1 215 0 8 646 23 0 0 0 chrUextra 8037309 8037332 -20967324 + AT_rich Low_complexity Low_complexity 1 23 0 8 646 1526 29 0 99 chrUextra 8037476 8037709 -20966947 + DIVER2_I LTR Pao 1366 1575 -2572 8 646 6562 18 1 11 chrUextra 8037826 8038627 -20966029 + Gypsy12_I LTR Gypsy 856 1648 -3898 8 646 3251 177 14 20 chrUextra 8038727 8039519 -20965137 - SAR_DM Satellite Satellite -501 971 185 8 646 2041 182 83 25 chrUextra 8039683 8040429 -20964227 + SAR_DM Satellite Satellite 1 789 -208 8 646 576 39 0 0 chrUextra 8040532 8040610 -20964046 + STALKER4_I LTR Gypsy 6453 6530 0 8 646 3036 60 1 14 chrUextra 8040620 8041051 -20963605 + STALKER4_LTR LTR Gypsy 9 399 -3 8 646 2351 11 4 0 chrUextra 8041051 8041330 -20963326 + Gypsy4_I LTR Gypsy 896 1175 -5113 8 646 364 228 53 53 chrUextra 8041441 8041612 -20963044 - Gypsy12A_LTR LTR Gypsy -1285 995 825 8 646 4357 34 74 21 chrUextra 8041624 8042231 -20962425 - Baggins1 LINE LOA -5 5448 4810 8 646 527 205 15 76 chrUextra 8042331 8042541 -20962115 + TOM_I LTR Gypsy 858 1085 -5082 8 646 977 265 48 34 chrUextra 8042681 8043123 -20961533 + TOM_I LTR Gypsy 1328 1775 -4337 8 646 3268 182 9 14 chrUextra 8043232 8044027 -20960629 - SAR_DM Satellite Satellite -487 985 195 8 646 3328 177 11 13 chrUextra 8044133 8044928 -20959728 - SAR_DM Satellite Satellite -484 988 195 8 646 4093 0 0 2 chrUextra 8045034 8045511 -20959145 + FW_DM LINE Jockey 4203 4678 -14 8 646 1620 19 0 0 chrUextra 8045511 8045833 -20958823 + (GAGAA)n Simple_repeat Simple_repeat 1 322 0 8 646 410 100 14 0 chrUextra 8045936 8046006 -20958650 - ARS406_DM Unknown Unknown -282 71 1 8 646 3335 181 24 8 chrUextra 8045945 8046736 -20957920 + SAR_DM Satellite Satellite 224 1027 -445 8 646 1583 11 5 0 chrUextra 8046836 8047024 -20957632 - Invader1_LTR LTR Gypsy -234 189 1 8 646 5054 8 23 10 chrUextra 8047024 8047637 -20957019 - CIRCE LINE Composite -1984 4372 3752 8 646 204 40 0 0 chrUextra 8048322 8048347 -20956309 + (TTG)n Simple_repeat Simple_repeat 2 26 0 8 646 6544 16 6 6 chrUextra 8048638 8049439 -20955217 + FW_DM LINE Jockey 3401 4201 -491 8 646 6585 22 0 0 chrUextra 8049539 8050338 -20954318 - FW_DM LINE Jockey -913 3779 2981 8 646 868 338 39 35 chrUextra 8050441 8051233 -20953423 - HMSBEAGLE_I LTR Gypsy -1599 4930 4136 8 646 631 17 0 0 chrUextra 8051342 8051424 -20953232 + Gypsy12_LTR LTR Gypsy 2199 2336 0 8 646 4351 40 20 28 chrUextra 8051424 8052142 -20952514 + Gypsy12_I LTR Gypsy 1 767 -4779 8 646 664 206 0 7 chrUextra 8052329 8052471 -20952185 + HETRP_DM Satellite Satellite 1529 1669 -203 8 646 689 206 0 7 chrUextra 8052640 8052782 -20951874 + HETRP_DM Satellite Satellite 1529 1669 -203 8 646 430 209 0 11 chrUextra 8052951 8053043 -20951613 + HETRP_DM Satellite Satellite 1529 1619 -253 8 646 3439 184 9 8 chrUextra 8053143 8053944 -20950712 - SAR_DM Satellite Satellite -404 1068 267 8 646 5991 44 39 1 chrUextra 8054044 8054845 -20949811 + R1_DM LINE R1 835 1665 -3691 8 646 3954 84 72 83 chrUextra 8054945 8055670 -20948986 + Invader1_I LTR Gypsy 2470 3186 0 8 646 323 132 0 93 chrUextra 8055671 8055746 -20948910 + Invader1_LTR LTR Gypsy 2 69 -354 8 646 1555 136 185 26 chrUextra 8056196 8056499 -20948157 + DMRT1B LINE R1 4815 5165 -18 8 646 2618 94 19 6 chrUextra 8056747 8057548 -20947108 + DMSAT6 Satellite Satellite 1 810 -85 8 646 370 178 50 101 chrUextra 8057681 8057800 -20946856 - Copia_I LTR Copia -80 4513 4401 8 646 22 56 0 0 chrUextra 8057845 8057881 -20946775 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 2077 179 36 10 chrUextra 8058035 8058446 -20946210 + HETA LINE telomeric 4031 4452 -1629 8 646 3685 184 15 12 chrUextra 8058551 8059350 -20945306 - SAR_DM Satellite Satellite -417 1055 255 8 646 3443 202 53 12 chrUextra 8059511 8060251 -20944405 + HETA LINE telomeric 669 1438 -4643 8 646 236 159 0 83 chrUextra 8060362 8060410 -20944246 - HETRP_DM Satellite Satellite -310 1562 1519 8 646 243 208 0 19 chrUextra 8060457 8060511 -20944145 - HETRP_DM Satellite Satellite -240 1632 1580 8 646 855 176 12 29 chrUextra 8060554 8060724 -20943932 - HETRP_DM Satellite Satellite -190 1682 1516 8 646 315 185 250 42 chrUextra 8060772 8060868 -20943788 - HETRP_DM Satellite Satellite -238 1634 1519 8 646 243 208 0 19 chrUextra 8060915 8060969 -20943687 - HETRP_DM Satellite Satellite -240 1632 1580 8 646 689 163 14 36 chrUextra 8061012 8061152 -20943504 - HETRP_DM Satellite Satellite -190 1682 1546 8 646 7016 28 0 0 chrUextra 8061252 8062053 -20942603 - R1_DM LINE R1 -1988 3368 2568 8 646 1207 0 7 0 chrUextra 8062153 8062289 -20942367 - NOMAD_I LTR Gypsy -6435 137 1 8 646 3768 7 0 0 chrUextra 8062289 8062698 -20941958 - NOMAD_LTR LTR Gypsy 0 518 110 8 646 515 190 236 52 chrUextra 8062718 8062951 -20941705 - ROVER-LTR_DM LTR Gypsy -2 365 90 8 646 1023 79 7 0 chrUextra 8063054 8063193 -20941463 - R1_DM LINE R1 -5216 140 1 8 646 987 44 0 0 chrUextra 8063226 8063340 -20941316 - R1_DM LINE R1 0 5356 5243 8 646 4401 29 15 0 chrUextra 8063337 8063855 -20940801 - R1_DM LINE R1 -290 5066 4541 8 646 1861 94 0 0 chrUextra 8063955 8064209 -20940447 + DMRT1B LINE R1 1827 2080 -3103 8 646 3855 73 119 0 chrUextra 8064206 8064751 -20939905 + DMRT1B LINE R1 2229 2838 -2345 8 646 7402 4 1 1 chrUextra 8064856 8065657 -20938999 + SSU-rRNA_Dme rRNA rRNA 118 918 -1077 8 646 6887 20 24 2 chrUextra 8065757 8066558 -20938098 - R1_DM LINE R1 -1375 3981 3164 8 646 3536 170 14 21 chrUextra 8066660 8067435 -20937221 - SAR_DM Satellite Satellite -523 949 180 8 646 688 177 0 0 chrUextra 8067328 8067458 -20937198 + ARS406_DM Unknown Unknown 1 130 -223 8 646 263 91 0 0 chrUextra 8067560 8067593 -20937063 + Baggins1 LINE LOA 4727 4759 -694 8 646 757 103 241 0 chrUextra 8067598 8067743 -20936913 + FB4_DM DNA Tc1 3908 4087 -2 8 646 6990 0 0 8 chrUextra 8068460 8069261 -20935395 + ROO_I LTR Pao 4448 5242 -3014 8 646 3327 236 24 17 chrUextra 8069361 8071061 -20933595 - SAR_DM Satellite Satellite -545 1712 1 8 646 2398 38 0 3 chrUextra 8071165 8071453 -20933203 - QUASIMODO_I LTR Gypsy -5773 287 1 8 646 4569 8 10 4 chrUextra 8071453 8071964 -20932692 - QUASIMODO_LTR LTR Gypsy 0 658 145 8 646 3226 159 13 15 chrUextra 8072064 8072855 -20931801 - SAR_DM Satellite Satellite -1005 788 1 8 646 407 257 114 96 chrUextra 8073355 8073635 -20931021 - Invader1_LTR LTR Gypsy -55 368 84 8 646 3685 183 9 10 chrUextra 8073866 8074667 -20929989 - SAR_DM Satellite Satellite -417 1055 256 8 646 6358 59 26 1 chrUextra 8074767 8075568 -20929088 + TART_B1 LINE telomeric 2723 3543 -7111 8 646 3575 176 19 24 chrUextra 8075671 8076469 -20928187 - SAR_DM Satellite Satellite -300 1172 379 8 646 3704 183 13 9 chrUextra 8076572 8077364 -20927292 + SAR_DM Satellite Satellite 282 1076 -396 8 646 4715 41 64 9 chrUextra 8077470 8078270 -20926386 - BATUMI_I LTR Pao -2180 5783 4940 8 646 317 225 50 0 chrUextra 8078371 8078451 -20926205 + DMCR1A LINE CR1 4346 4429 -41 8 646 21 0 0 0 chrUextra 8078573 8078594 -20926062 + AT_rich Low_complexity Low_complexity 1 21 0 8 646 679 116 316 5 chrUextra 8078964 8079169 -20925487 + DNAREP1_DM LINE Penelope 1 269 -325 8 646 4608 31 0 0 chrUextra 8079270 8079822 -20924834 - MDG1_I LTR Gypsy -3063 3533 2982 8 646 2029 36 0 4 chrUextra 8079823 8080070 -20924586 - MDG1_I LTR Gypsy -4135 2461 2216 8 646 2041 181 11 6 chrUextra 8080177 8080962 -20923694 + SAR_DM Satellite Satellite 1 788 -558 8 646 2682 33 0 0 chrUextra 8081070 8081376 -20923280 + CIRCE LINE Composite 6051 6356 0 8 646 4354 24 8 0 chrUextra 8081376 8081870 -20922786 + CIRCE LINE Composite 1 498 -5858 8 646 3827 216 4 1 chrUextra 8081970 8082768 -20921888 + BLOOD_I LTR Gypsy 3753 4552 -2061 8 646 2871 183 28 71 chrUextra 8082870 8083669 -20920987 + SAR_DM Satellite Satellite 295 1058 -414 8 646 2867 6 0 0 chrUextra 8083770 8084090 -20920566 - DOC LINE Jockey -2795 1930 1611 8 646 231 235 97 81 chrUextra 8084282 8084467 -20920189 - Gypsy5_I LTR Gypsy -586 5923 5736 8 646 7314 4 0 0 chrUextra 8084670 8085470 -20919186 + R1_DM LINE R1 2627 3426 -1930 8 646 6752 23 52 2 chrUextra 8085570 8086370 -20918286 + R1_DM LINE R1 2117 2956 -2400 8 646 2115 4 0 13 chrUextra 8086470 8086707 -20917949 + BEL_I LTR Pao 5171 5404 0 8 646 3377 0 0 0 chrUextra 8086707 8087068 -20917588 + BEL_LTR LTR Pao 1 361 0 8 646 1661 30 0 0 chrUextra 8087068 8087268 -20917388 - PROTOP DNA P -3497 983 784 8 646 2597 101 23 45 chrUextra 8087370 8088147 -20916509 - DMSAT6 Satellite Satellite -83 759 1 8 646 6923 14 5 0 chrUextra 8088270 8089070 -20915586 - PROTOP DNA P -82 4398 3595 8 646 1838 33 124 0 chrUextra 8089397 8089638 -20915018 + Baggins1 LINE LOA 4727 4997 -456 8 646 1043 50 0 92 chrUextra 8089634 8089787 -20914869 + Baggins1 LINE LOA 5315 5453 0 8 646 5564 10 91 0 chrUextra 8090070 8090870 -20913786 - FW_DM LINE Jockey -62 4630 3758 8 646 7344 1 0 0 chrUextra 8090970 8091770 -20912886 - ROO_I LTR Pao -5517 2739 1940 8 646 3380 198 12 12 chrUextra 8091870 8092667 -20911989 - SAR_DM Satellite Satellite -484 988 192 8 646 4169 2 79 0 chrUextra 8092770 8093570 -20911086 - FW_DM LINE Jockey -1128 3564 2702 8 646 7296 2 2 2 chrUextra 8093670 8094470 -20910186 - LSU-rRNA_Dme rRNA rRNA -2216 1684 885 8 646 3588 40 22 4 chrUextra 8094570 8095370 -20909286 + R1_DM LINE R1 727 1636 -3720 8 646 3604 22 0 0 chrUextra 8095470 8095880 -20908776 + NINJA_I LTR Pao 1188 1597 -4414 8 646 3027 82 0 3 chrUextra 8095878 8096270 -20908386 - R1_DM LINE R1 -3535 1821 1431 8 646 1761 30 0 0 chrUextra 8096370 8096568 -20908088 + PROTOP DNA P 4283 4480 0 8 646 22 80 0 0 chrUextra 8096928 8096978 -20907678 + AT_rich Low_complexity Low_complexity 1 50 0 8 646 29 47 0 0 chrUextra 8097024 8097067 -20907589 + AT_rich Low_complexity Low_complexity 1 43 0 8 646 21 89 0 0 chrUextra 8097103 8097159 -20907497 + AT_rich Low_complexity Low_complexity 1 56 0 8 646 2567 11 0 0 chrUextra 8097270 8097549 -20907107 - LSU-rRNA_Dme rRNA rRNA -1044 2856 2578 8 646 4829 2 23 0 chrUextra 8097545 8098070 -20906586 - R2_DM LINE R2 -6 3601 3065 8 646 2136 66 10 27 chrUextra 8098170 8098464 -20906192 + FW3_DM LINE Jockey 847 1135 -1997 8 646 1692 84 9 0 chrUextra 8098467 8098694 -20905962 + FW3_DM LINE Jockey 1659 1887 -1245 8 646 4881 6 0 2 chrUextra 8099070 8099603 -20905053 + R1_DM LINE R1 4825 5356 0 8 646 2332 30 0 0 chrUextra 8099601 8099870 -20904786 + LSU-rRNA_Dme rRNA rRNA 2640 2908 -992 8 646 4455 8 0 0 chrUextra 8099970 8100450 -20904206 - R2_DM LINE R2 -1153 2454 1975 8 646 3021 0 0 0 chrUextra 8100446 8100770 -20903886 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2258 8 646 3489 106 65 70 chrUextra 8100889 8101662 -20902994 + BATUMI_I LTR Pao 1 769 -7194 8 646 6863 22 16 1 chrUextra 8101770 8102570 -20902086 - R1_DM LINE R1 -790 4566 3755 8 646 6166 90 15 0 chrUextra 8102670 8103470 -20901186 - GTWIN_I LTR Gypsy -2784 3637 2826 8 646 3475 179 35 27 chrUextra 8103573 8104368 -20900288 + SAR_DM Satellite Satellite 1 801 -216 8 646 3305 194 11 33 chrUextra 8104479 8105269 -20899387 - SAR_DM Satellite Satellite -569 772 1 8 646 7079 15 1 1 chrUextra 8105370 8106169 -20898487 - R1_DM LINE R1 -751 4605 3807 8 646 7435 4 0 0 chrUextra 8106270 8107070 -20897586 + DIVER_I LTR Pao 2588 3387 -2256 8 646 3604 87 4 42 chrUextra 8107170 8107720 -20896936 + Gypsy12_I LTR Gypsy 74 602 -4944 8 646 1523 86 164 0 chrUextra 8107738 8107970 -20896686 + Gypsy12_I LTR Gypsy 4395 4664 -882 8 646 6958 30 0 0 chrUextra 8108070 8108870 -20895786 + MAX_I LTR Pao 4894 5693 -2221 8 646 6927 16 30 0 chrUextra 8108973 8109770 -20894886 - R1_DM LINE R1 -2567 2789 1969 8 646 3097 198 26 26 chrUextra 8109877 8110670 -20893986 + SAR_DM Satellite Satellite 1 793 -216 8 646 6748 14 38 11 chrUextra 8110770 8111570 -20893086 - DOC2_DM LINE Jockey -2400 2393 1573 8 646 5431 26 3 0 chrUextra 8111670 8112288 -20892368 + DIVER2_I LTR Pao 448 1067 -3080 8 646 800 36 242 0 chrUextra 8112284 8112470 -20892186 + DIVER2_I LTR Pao 2842 3072 -1075 8 646 7181 9 0 4 chrUextra 8112570 8113370 -20891286 - STALKER4_I LTR Gypsy -1570 4960 4164 8 646 3216 214 9 9 chrUextra 8114371 8115162 -20889494 - SAR_DM Satellite Satellite -464 1008 218 8 646 3621 184 18 12 chrUextra 8115271 8116070 -20888586 + SAR_DM Satellite Satellite 227 1029 -443 8 646 3398 41 10 0 chrUextra 8116170 8116586 -20888070 - IDEFIX_I LTR Gypsy -5208 420 1 8 646 220 200 13 51 chrUextra 8116787 8116866 -20887790 + T-rich Low_complexity Low_complexity 1 76 0 8 646 6253 44 21 5 chrUextra 8117070 8117870 -20886786 + IDEFIX_I LTR Gypsy 3049 3861 -1767 8 646 6921 31 0 0 chrUextra 8117970 8118768 -20885888 - DMRT1B LINE R1 -1402 3781 2984 8 646 7415 2 0 0 chrUextra 8118875 8119670 -20884986 - Invader1_I LTR Gypsy -299 2887 2093 8 646 1901 47 0 4 chrUextra 8119770 8120005 -20884651 + TRANSIB2 DNA Transib 389 622 -2222 8 646 4379 43 20 4 chrUextra 8120033 8120570 -20884086 + TRANSIB2 DNA Transib 1027 1572 -1272 8 646 274 125 0 0 chrUextra 8120671 8120711 -20883945 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 646 22 56 0 0 chrUextra 8120724 8120760 -20883896 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 936 9 0 27 chrUextra 8120786 8120898 -20883758 + NTS_DM Other Other 25 133 -107 8 646 1350 18 0 6 chrUextra 8120898 8121063 -20883593 + NTS_DM Other Other 38 201 -39 8 646 923 18 0 27 chrUextra 8121115 8121227 -20883429 + NTS_DM Other Other 25 133 -107 8 646 1350 18 0 6 chrUextra 8121227 8121392 -20883264 + NTS_DM Other Other 38 201 -39 8 646 6937 30 18 0 chrUextra 8121570 8122370 -20882286 + DIVER_I LTR Pao 800 1613 -4030 8 646 3525 40 0 2 chrUextra 8122470 8122897 -20881759 - IDEFIX_I LTR Gypsy -5202 426 1 8 646 2105 37 0 0 chrUextra 8123025 8123269 -20881387 + PROTOP_A DNA P 1 244 -861 8 646 3375 88 16 2 chrUextra 8123370 8123815 -20880841 - Gypsy_I LTR Gypsy -594 5913 5463 8 646 246 139 0 0 chrUextra 8123816 8123859 -20880797 + G6_DM LINE Jockey 1 43 -1999 8 646 627 124 9 0 chrUextra 8124269 8124374 -20880282 - ARS406_DM Unknown Unknown -247 106 1 8 646 3481 178 9 8 chrUextra 8124281 8125068 -20879588 + SAR_DM Satellite Satellite 1 787 -542 8 646 1324 86 91 0 chrUextra 8125168 8125365 -20879291 + Gypsy9_LTR LTR Gypsy 51 265 -71 8 646 3402 91 86 53 chrUextra 8125350 8125967 -20878689 + Gypsy9_I LTR Gypsy 12 648 -4029 8 80 3591 186 8 10 chrUextra 8126068 8126848 -20877808 - SAR_DM Satellite Satellite -514 958 181 8 647 764 114 0 8 chrUextra 8126742 8126866 -20877790 + ARS406_DM Unknown Unknown 1 123 -230 8 647 1865 45 0 0 chrUextra 8126966 8127188 -20877468 + DM1731_LTR LTR Copia 115 336 0 8 647 4948 28 7 0 chrUextra 8127189 8127765 -20876891 - TAHRE LINE telomeric -9597 866 287 8 647 7340 2 24 0 chrUextra 8127865 8128664 -20875992 + Gypsy6_I LTR Gypsy 3181 3998 -3014 8 647 3514 172 31 25 chrUextra 8128767 8129550 -20875106 + SAR_DM Satellite Satellite 332 1118 -354 8 647 381 172 10 31 chrUextra 8129464 8129560 -20875096 - XDMR_DM Unknown Unknown 0 360 267 8 647 968 0 0 0 chrUextra 8130562 8130671 -20873985 - Stalker2_LTR LTR Gypsy -315 109 1 8 647 5564 12 1 3 chrUextra 8130671 8131361 -20873295 - Stalker2_I LTR Gypsy 0 7402 6714 8 647 368 241 35 35 chrUextra 8131802 8131918 -20872738 + Gypsy5_I LTR Gypsy 4298 4413 -2096 8 647 645 139 49 11 chrUextra 8131918 8132202 -20872454 + GA-rich Low_complexity Low_complexity 1 295 0 8 647 252 0 0 0 chrUextra 8133739 8133767 -20870889 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8 647 203 202 19 66 chrUextra 8134463 8134569 -20870087 + (TTTAG)n Simple_repeat Simple_repeat 3 103 0 8 647 210 259 33 26 chrUextra 8134597 8134748 -20869908 + (TTTAG)n Simple_repeat Simple_repeat 3 154 0 8 647 210 259 33 26 chrUextra 8134776 8134927 -20869729 + (TTTAG)n Simple_repeat Simple_repeat 3 154 0 8 647 3281 199 16 20 chrUextra 8135062 8135856 -20868800 - SAR_DM Satellite Satellite -255 1217 427 8 647 2400 65 2 20 chrUextra 8135956 8136284 -20868372 + STALKER4_LTR LTR Gypsy 85 392 -10 8 647 2419 91 7 48 chrUextra 8136277 8136740 -20867916 - DMSAT6 Satellite Satellite -22 448 5 8 647 1199 49 0 0 chrUextra 8137237 8137380 -20867276 - CIRCE LINE Composite -1376 4980 4838 8 647 1014 52 7 0 chrUextra 8137376 8137504 -20867152 - CIRCE LINE Composite -1735 4621 4493 8 647 1085 60 0 0 chrUextra 8137504 8137654 -20867002 - S_DM DNA Tc1 0 1736 1587 8 647 2503 101 16 41 chrUextra 8137754 8138553 -20866103 - DMSAT6 Satellite Satellite -140 778 1 8 647 5058 81 3 30 chrUextra 8139604 8140351 -20864305 + STALKER4_I LTR Gypsy 17 743 -5787 8 647 1876 102 8 52 chrUextra 8140451 8140870 -20863786 - DOC2_DM LINE Jockey -4310 483 6 8 647 1863 159 16 8 chrUextra 8140883 8141250 -20863406 + SAR_DM Satellite Satellite 380 749 -723 8 647 2669 83 20 13 chrUextra 8141350 8142149 -20862507 + DMSAT6 Satellite Satellite 1 805 -3 8 647 6232 52 1 10 chrUextra 8142249 8143048 -20861608 - R1_DM LINE R1 -4402 954 163 8 647 31 26 0 0 chrUextra 8143853 8143891 -20860765 + AT_rich Low_complexity Low_complexity 1 38 0 8 647 7121 1 2 0 chrUextra 8144047 8144846 -20859810 + DM176_I LTR Gypsy 1485 2285 -4135 8 647 1581 28 0 0 chrUextra 8146030 8146284 -20858372 + (CAAGA)n Simple_repeat Simple_repeat 1 254 0 8 647 3675 169 29 18 chrUextra 8146744 8147543 -20857113 - SAR_DM Satellite Satellite -453 1019 212 8 647 1593 0 0 0 chrUextra 8147643 8147820 -20856836 + (GAGAA)n Simple_repeat Simple_repeat 2 178 0 8 647 3118 108 39 101 chrUextra 8148542 8149208 -20855448 - PROTOP_B DNA P -109 1044 420 8 647 1173 15 0 8 chrUextra 8149208 8149341 -20855315 - PROTOP_B DNA P 0 1153 1025 8 647 936 9 0 27 chrUextra 8149447 8149559 -20855097 + NTS_DM Other Other 25 133 -107 8 647 1640 5 20 15 chrUextra 8149559 8149761 -20854895 + NTS_DM Other Other 38 240 0 8 647 1401 6 0 18 chrUextra 8149761 8149926 -20854730 + NTS_DM Other Other 1 162 -78 8 647 521 131 36 0 chrUextra 8150036 8150120 -20854536 + NTS_DM Other Other 4 90 -150 8 647 3652 177 13 13 chrUextra 8151250 8152034 -20852622 - SAR_DM Satellite Satellite -396 1076 293 8 647 6829 5 19 14 chrUextra 8153037 8153836 -20850820 + MDG1_I LTR Gypsy 319 1121 -5475 8 647 6089 60 0 6 chrUextra 8153936 8154735 -20849921 - BATUMI_I LTR Pao -1162 6752 5716 8 647 3514 186 29 11 chrUextra 8154836 8155630 -20849026 + SAR_DM Satellite Satellite 352 1159 -313 8 647 2513 92 10 34 chrUextra 8155738 8156322 -20848334 - DMSAT6 Satellite Satellite -82 570 1 8 647 1744 254 2 104 chrUextra 8156349 8156867 -20847789 - DMSAT6 Satellite Satellite 0 470 6 8 647 2466 103 11 20 chrUextra 8156888 8157432 -20847224 - DMSAT6 Satellite Satellite 0 538 1 8 647 6815 14 15 8 chrUextra 8157532 8158331 -20846325 + DOC2_DM LINE Jockey 1874 2678 -2115 8 647 510 0 0 0 chrUextra 8159175 8159230 -20845426 - PROTOP_B DNA P 0 1153 1099 8 647 6923 6 1 3 chrUextra 8159330 8160107 -20844549 - DM176_I LTR Gypsy -5110 1310 535 8 647 22 0 0 0 chrUextra 8160107 8160129 -20844527 + AT_rich Low_complexity Low_complexity 1 22 0 8 647 2350 4 4 0 chrUextra 8160229 8160487 -20844169 - MDG3_I LTR Gypsy -4727 259 1 8 647 2261 23 8 0 chrUextra 8160486 8160751 -20843905 - MDG3_LTR LTR Gypsy 0 267 1 8 647 6231 15 134 0 chrUextra 8161128 8161927 -20842729 + IDEFIX_I LTR Gypsy 4483 5388 -240 8 647 2602 86 25 19 chrUextra 8162027 8162826 -20841830 - DMSAT6 Satellite Satellite -127 804 1 8 647 3508 171 24 29 chrUextra 8162928 8163725 -20840931 - SAR_DM Satellite Satellite -300 1172 380 8 647 5764 100 39 0 chrUextra 8163825 8164624 -20840032 - Gypsy12_I LTR Gypsy -1959 3587 2758 8 647 6432 46 0 14 chrUextra 8164724 8165523 -20839133 - STALKER4_I LTR Gypsy -2475 4055 3268 8 647 6354 48 8 0 chrUextra 8166522 8167319 -20837337 - IDEFIX_I LTR Gypsy -4298 1330 528 8 647 5094 51 4 11 chrUextra 8167421 8168220 -20836436 - BATUMI_I LTR Pao -5170 2744 1953 8 647 6591 6 13 1 chrUextra 8168323 8169119 -20835537 + G_DM LINE Jockey 1 805 -3541 8 647 5880 23 0 0 chrUextra 8169219 8169928 -20834728 - FW_DM LINE Jockey -3631 1061 353 8 647 740 11 0 0 chrUextra 8169927 8170017 -20834639 + R1_DM LINE R1 2973 3062 -2294 8 647 4944 111 0 39 chrUextra 8170120 8170914 -20833742 + Gypsy3_I LTR Gypsy 1521 2283 -3894 8 647 906 100 0 16 chrUextra 8171020 8171203 -20833453 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 647 1049 82 0 6 chrUextra 8171212 8171384 -20833272 + (CTTAT)n Simple_repeat Simple_repeat 4 174 0 8 647 305 131 0 28 chrUextra 8171388 8171415 -20833241 + polypyrimidine Low_complexity Low_complexity 47 73 0 8 647 1290 56 0 0 chrUextra 8171415 8171771 -20832885 + (CTTAT)n Simple_repeat Simple_repeat 1 356 0 8 647 305 131 0 28 chrUextra 8171771 8171813 -20832843 + polypyrimidine Low_complexity Low_complexity 6 46 0 8 647 6713 4 0 1 chrUextra 8171916 8172711 -20831945 - ROO_I LTR Pao -925 7331 6538 8 647 2527 13 0 0 chrUextra 8172811 8173111 -20831545 - STALKER4_LTR LTR Gypsy -102 300 1 8 647 3775 12 12 2 chrUextra 8173111 8173609 -20831047 - STALKER4_I LTR Gypsy 0 6530 6028 8 647 724 144 36 7 chrUextra 8173720 8173860 -20830796 - Gypsy12_LTR LTR Gypsy -962 1374 1231 8 647 1500 205 133 27 chrUextra 8173859 8174479 -20830177 - Gypsy12_LTR LTR Gypsy -566 1714 1050 8 647 478 63 0 0 chrUextra 8174609 8174672 -20829984 - Baggins1 LINE LOA -600 4853 4791 8 647 4201 58 14 12 chrUextra 8174828 8175405 -20829251 - R1_DM LINE R1 -3113 2243 1666 8 647 1178 132 3 172 chrUextra 8175757 8176059 -20828597 + HOBO DNA hAT 23 273 -2743 8 647 944 120 280 4 chrUextra 8176064 8176303 -20828353 + PROTOP_B DNA P 33 337 -816 8 647 6351 0 1 0 chrUextra 8176403 8177126 -20827530 + LSU-rRNA_Dme rRNA rRNA 3177 3900 0 8 647 6173 26 0 5 chrUextra 8177301 8178099 -20826557 - ROO_I LTR Pao -60 8196 7403 8 647 6737 15 0 0 chrUextra 8178199 8178995 -20825661 + Gypsy4_I LTR Gypsy 3622 4417 -1871 8 647 1850 36 43 8 chrUextra 8179097 8179351 -20825305 - TRANSIB2 DNA Transib -1555 1289 1027 8 647 2118 49 0 3 chrUextra 8179379 8179665 -20824991 - TRANSIB2 DNA Transib -2222 622 338 8 647 1181 40 0 26 chrUextra 8179670 8179825 -20824831 - MICROPIA_I LTR Gypsy -1157 3319 3169 8 647 422 118 0 0 chrUextra 8179827 8179895 -20824761 + Gypsy8_LTR LTR Gypsy 1 68 -236 8 647 342 326 14 14 chrUextra 8180023 8180166 -20824490 + Gypsy3_I LTR Gypsy 6032 6174 -3 8 647 1701 111 16 60 chrUextra 8180169 8180485 -20824171 + Gypsy6A_LTR LTR Gypsy 1 302 -118 8 647 34 24 0 0 chrUextra 8180713 8180754 -20823902 + AT_rich Low_complexity Low_complexity 1 41 0 8 647 6278 11 2 16 chrUextra 8180893 8181691 -20822965 + ROO_I LTR Pao 647 1433 -6823 8 647 2361 116 6 38 chrUextra 8181791 8182589 -20822067 - DMSAT6 Satellite Satellite -124 773 1 8 647 1501 17 0 0 chrUextra 8182689 8182867 -20821789 - DIVER2_I LTR Pao -227 3920 3743 8 647 1526 29 0 99 chrUextra 8182865 8183098 -20821558 - DIVER2_I LTR Pao -2572 1575 1366 8 647 23 0 0 0 chrUextra 8183242 8183265 -20821391 + AT_rich Low_complexity Low_complexity 1 23 0 8 647 3217 177 13 19 chrUextra 8183589 8184374 -20820282 - SAR_DM Satellite Satellite -361 1111 332 8 647 5772 60 0 0 chrUextra 8184485 8185283 -20819373 + IDEFIX_I LTR Gypsy 3596 4393 -1235 8 647 266 226 42 21 chrUextra 8185783 8185878 -20818778 + (CAA)n Simple_repeat Simple_repeat 1 97 0 8 647 254 227 11 0 chrUextra 8185958 8186046 -20818610 + ROO_I LTR Pao 660 748 -7508 8 647 3389 22 3 21 chrUextra 8186281 8187002 -20817654 - Gypsy2_I LTR Gypsy -5312 823 1 8 647 600 26 26 0 chrUextra 8187002 8187078 -20817578 - Gypsy2_LTR LTR Gypsy 0 353 276 8 647 3294 181 15 19 chrUextra 8187182 8187977 -20816679 - SAR_DM Satellite Satellite -425 1047 256 8 647 6394 38 1 0 chrUextra 8188077 8188875 -20815781 - R1_DM LINE R1 -211 5145 4347 8 647 3362 180 8 14 chrUextra 8188975 8189770 -20814886 + SAR_DM Satellite Satellite 248 1037 -435 8 647 22 35 0 0 chrUextra 8190214 8190243 -20814413 + AT_rich Low_complexity Low_complexity 1 29 0 8 647 6146 24 33 0 chrUextra 8190771 8191567 -20813089 - PROTOP_A DNA P -283 822 1 8 647 3082 192 14 24 chrUextra 8191670 8192467 -20812189 + SAR_DM Satellite Satellite 429 1217 -255 8 647 2531 80 30 21 chrUextra 8192567 8193365 -20811291 - DMSAT6 Satellite Satellite -96 805 1 8 647 3246 170 18 24 chrUextra 8193465 8194259 -20810397 - SAR_DM Satellite Satellite -315 1157 369 8 647 2472 211 25 67 chrUextra 8194364 8195157 -20809499 - TART_B1 LINE telomeric -9067 1587 828 8 647 2948 196 11 15 chrUextra 8195262 8196059 -20808597 - SAR_DM Satellite Satellite -587 793 1 8 647 3091 90 58 40 chrUextra 8196159 8196957 -20807699 + PROTOP_A DNA P 324 1105 -48 8 647 4199 6 0 0 chrUextra 8197057 8197544 -20807112 + DMRT1B LINE R1 4697 5183 0 8 647 2429 17 23 13 chrUextra 8197552 8197855 -20806801 - R1_DM LINE R1 -760 4596 4291 8 647 497 126 0 11 chrUextra 8197974 8198062 -20806594 - G3_DM LINE Jockey -4416 189 103 8 647 3300 177 21 18 chrUextra 8198853 8199631 -20805025 + SAR_DM Satellite Satellite 380 1159 -313 8 647 459 234 0 14 chrUextra 8199508 8199651 -20805005 - XDMR_DM Unknown Unknown 0 360 220 8 647 398 326 41 26 chrUextra 8200044 8200549 -20804107 - ZAM_I LTR Gypsy -1838 5652 5392 8 647 966 160 37 61 chrUextra 8200739 8201398 -20803258 - DNAREP1_DM LINE Penelope -262 332 79 8 647 319 137 14 14 chrUextra 8201373 8201447 -20803209 - DNAREP1_DM LINE Penelope -275 319 246 8 647 4896 40 100 19 chrUextra 8201552 8202345 -20802311 + BATUMI_I LTR Pao 1190 2046 -5917 8 647 935 190 102 0 chrUextra 8202481 8202707 -20801949 + FW_DM LINE Jockey 1437 1685 -3007 8 647 584 53 0 0 chrUextra 8202722 8202797 -20801859 + FW_DM LINE Jockey 1898 1972 -2720 8 647 887 172 32 11 chrUextra 8202795 8202983 -20801673 + FW_DM LINE Jockey 2403 2594 -2098 8 647 1528 130 0 4 chrUextra 8202988 8203243 -20801413 + FW_DM LINE Jockey 3399 3652 -1040 8 647 4493 11 64 0 chrUextra 8203343 8204141 -20800515 + DOC LINE Jockey 1393 2241 -2484 8 647 36 55 0 52 chrUextra 8204272 8204388 -20800268 + AT_rich Low_complexity Low_complexity 1 110 0 8 647 3039 3 0 0 chrUextra 8204682 8205039 -20799617 + NOMAD_LTR LTR Gypsy 1 357 -161 8 647 628 70 0 0 chrUextra 8205139 8205225 -20799431 + Baggins1 LINE LOA 4942 5027 -426 8 647 2622 75 87 10 chrUextra 8206037 8206835 -20797821 + DMSAT6 Satellite Satellite 1 859 -21 8 647 230 281 11 11 chrUextra 8207215 8207305 -20797351 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 8 647 5409 63 34 4 chrUextra 8207833 8208631 -20796025 + IDEFIX_I LTR Gypsy 2951 3772 -1856 8 647 6461 30 0 0 chrUextra 8208731 8209529 -20795127 + R1_DM LINE R1 2384 3181 -2175 8 647 762 40 0 0 chrUextra 8209629 8209728 -20794928 + ARS406_DM Unknown Unknown 91 189 -164 8 647 3028 178 15 11 chrUextra 8209639 8210426 -20794230 - SAR_DM Satellite Satellite -218 1254 195 8 647 449 29 229 0 chrUextra 8210527 8210597 -20794059 - PROTOP_B DNA P -1067 86 1 8 647 23 0 0 0 chrUextra 8211275 8211298 -20793358 + AT_rich Low_complexity Low_complexity 1 23 0 8 647 2305 122 15 6 chrUextra 8211425 8212219 -20792437 - DMSAT6 Satellite Satellite -112 801 1 8 647 339 292 0 0 chrUextra 8212588 8212694 -20791962 + Copia2_I LTR Copia 567 672 -3490 8 647 1742 13 82 0 chrUextra 8213221 8213453 -20791203 - IDEFIX_LTR LTR Gypsy -343 251 1 8 647 241 105 0 0 chrUextra 8213421 8213459 -20791197 + BARI1 DNA Tc1 3 40 -1710 8 647 24 0 0 0 chrUextra 8213603 8213627 -20791029 + AT_rich Low_complexity Low_complexity 1 24 0 8 647 291 232 0 0 chrUextra 8213857 8213926 -20790730 - BS2 LINE Jockey -507 4214 4146 8 647 317 281 104 86 chrUextra 8214184 8214464 -20790192 + Invader1_LTR LTR Gypsy 84 368 -55 8 647 3024 191 15 23 chrUextra 8215017 8215814 -20788842 + SAR_DM Satellite Satellite 421 1211 -261 8 647 914 53 2 17 chrUextra 8215915 8216705 -20787951 - RSP Satellite Satellite -30 778 1 8 647 201 121 0 0 chrUextra 8217137 8217170 -20787486 + (TC)n Simple_repeat Simple_repeat 1 33 0 8 647 3837 15 96 0 chrUextra 8217714 8218509 -20786147 + DOC LINE Jockey 2030 2900 -1825 8 647 978 171 15 29 chrUextra 8218609 8218814 -20785842 - Gypsy12_LTR LTR Gypsy -2134 202 1 8 647 4229 78 32 2 chrUextra 8218814 8219404 -20785252 - Gypsy12_I LTR Gypsy 0 5546 4939 8 647 461 15 76 15 chrUextra 8219506 8219572 -20785084 + ARS406_DM Unknown Unknown 120 189 -164 8 647 2884 190 28 23 chrUextra 8219527 8220303 -20784353 - SAR_DM Satellite Satellite -255 1217 438 8 647 1098 7 7 0 chrUextra 8220403 8220538 -20784118 + ROO_I LTR Pao 8121 8256 0 8 647 3742 2 0 0 chrUextra 8220538 8220966 -20783690 + ROO_LTR LTR Pao 1 428 0 8 647 2008 0 0 0 chrUextra 8220966 8221200 -20783456 - ROO_I LTR Pao -2042 6214 5981 8 647 5714 23 37 0 chrUextra 8221303 8222012 -20782644 + DMCR1A LINE CR1 3736 4470 0 8 647 381 103 0 14 chrUextra 8222013 8222082 -20782574 + I_DM LINE I 5145 5212 -1019 8 647 1759 305 71 14 chrUextra 8222203 8222990 -20781666 - Gypsy5_I LTR Gypsy -3198 3311 2480 8 647 5611 21 0 0 chrUextra 8223094 8223753 -20780903 + PROTOP DNA P 3822 4480 0 8 647 661 156 0 0 chrUextra 8223753 8223891 -20780765 - TART_B1 LINE telomeric -9022 1632 1495 8 647 2541 288 2 6 chrUextra 8223994 8224787 -20779869 - G2_DM LINE Jockey -1331 1771 982 8 647 4613 17 0 4 chrUextra 8224888 8225419 -20779237 - G2_DM LINE Jockey -920 2182 1654 8 647 2158 15 0 0 chrUextra 8225422 8225685 -20778971 - PROTOP DNA P -329 4151 3889 8 647 4819 22 67 8 chrUextra 8225785 8226582 -20778074 + FW_DM LINE Jockey 3497 4340 -352 8 647 401 74 0 0 chrUextra 8226682 8226736 -20777920 + ARS406_DM Unknown Unknown 132 185 -168 8 647 3254 195 21 11 chrUextra 8226690 8227479 -20777177 - SAR_DM Satellite Satellite -255 1217 421 8 647 1265 199 84 16 chrUextra 8227616 8228375 -20776281 + SAR_DM Satellite Satellite 1 810 -680 8 647 278 87 0 21 chrUextra 8228484 8228531 -20776125 - Gypsy12A_LTR LTR Gypsy -725 1555 1510 8 647 213 65 0 0 chrUextra 8228531 8228562 -20776094 + (TATAA)n Simple_repeat Simple_repeat 3 33 0 8 647 1394 171 50 75 chrUextra 8228577 8228993 -20775663 - Gypsy12A_LTR LTR Gypsy -866 1414 1009 8 647 721 274 11 7 chrUextra 8229373 8229659 -20774997 - DM297_I LTR Gypsy -4371 1796 1458 8 647 642 252 19 19 chrUextra 8230322 8230526 -20774130 + Gypsy6_I LTR Gypsy 5161 5318 -1694 8 647 6924 8 1 4 chrUextra 8231168 8231964 -20772692 - LSU-rRNA_Dme rRNA rRNA -2535 1365 572 8 647 2125 174 5 7 chrUextra 8232067 8232490 -20772166 - SAR_DM Satellite Satellite -425 1047 626 8 647 1494 123 163 0 chrUextra 8232490 8232766 -20771890 - MAX_LTR LTR Pao 0 321 1 8 647 612 89 0 0 chrUextra 8232771 8232861 -20771795 - MAX_I LTR Pao -2 7912 7823 8 647 1729 33 5 0 chrUextra 8232979 8233193 -20771463 + PROTOP DNA P 4164 4378 -102 8 647 21 57 0 0 chrUextra 8233409 8233444 -20771212 + AT_rich Low_complexity Low_complexity 1 35 0 8 647 21 89 0 0 chrUextra 8233482 8233538 -20771118 + AT_rich Low_complexity Low_complexity 1 56 0 8 647 7085 1 0 0 chrUextra 8233858 8234655 -20770001 - QUASIMODO_I LTR Gypsy -3550 2510 1714 8 647 6570 34 1 2 chrUextra 8236549 8237346 -20767310 + NINJA_I LTR Pao 5208 6003 -8 8 647 1896 179 49 77 chrUextra 8237446 8238243 -20766413 + HETA LINE telomeric 6 677 -5404 8 647 6310 38 72 0 chrUextra 8238343 8239140 -20765516 - R1_DM LINE R1 -2398 2958 2105 8 647 288 29 0 0 chrUextra 8239240 8239275 -20765381 + Baggins1 LINE LOA 5217 5251 -202 8 647 569 81 0 0 chrUextra 8239382 8239456 -20765200 + Baggins1 LINE LOA 4791 4864 -589 8 647 1805 76 0 4 chrUextra 8239453 8239703 -20764953 - HOBO DNA hAT -2438 578 330 8 647 1981 83 190 20 chrUextra 8239680 8240032 -20764624 - PROTOP DNA P -4000 480 67 8 647 2711 97 16 30 chrUextra 8240137 8240928 -20763728 - DMSAT6 Satellite Satellite -31 779 1 8 647 1807 328 18 6 chrUextra 8241053 8241829 -20762827 + MICROPIA_I LTR Gypsy 955 1739 -2737 8 647 714 331 12 9 chrUextra 8242282 8242676 -20761980 - GTWIN_I LTR Gypsy -2883 3538 3147 8 647 3351 191 14 20 chrUextra 8242828 8243617 -20761039 + SAR_DM Satellite Satellite 389 1172 -300 8 647 4840 31 0 21 chrUextra 8243902 8244522 -20760134 - CIRCE LINE Composite -1376 4980 4374 8 647 7270 0 0 0 chrUextra 8244622 8245419 -20759237 + FW_DM LINE Jockey 3531 4327 -365 8 647 4523 48 5 12 chrUextra 8245519 8246316 -20758340 + PROTOP DNA P 201 853 -252 8 647 661 205 12 49 chrUextra 8246589 8246753 -20757903 + HETRP_DM Satellite Satellite 1518 1675 -197 8 647 702 186 14 14 chrUextra 8246911 8247058 -20757598 + HETRP_DM Satellite Satellite 1529 1675 -197 8 647 207 69 0 0 chrUextra 8247184 8247213 -20757443 + (GA)n Simple_repeat Simple_repeat 2 30 0 8 647 180 0 0 0 chrUextra 8247777 8247797 -20756859 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 8 647 1066 209 14 14 chrUextra 8247829 8248110 -20756546 - XDMR Unknown Unknown 0 361 81 8 647 2144 176 36 7 chrUextra 8248210 8249006 -20755650 + SAR_DM Satellite Satellite 1 818 -677 8 647 3437 184 11 12 chrUextra 8249114 8249879 -20754777 - SAR_DM Satellite Satellite -514 958 195 8 647 736 119 0 0 chrUextra 8249786 8249904 -20754752 + ARS406_DM Unknown Unknown 1 118 -235 8 647 3359 189 15 19 chrUextra 8250004 8250801 -20753855 + SAR_DM Satellite Satellite 418 1211 -261 8 647 6964 8 0 0 chrUextra 8250901 8251698 -20752958 - DM297_I LTR Gypsy -2364 3803 3007 8 647 1390 304 29 31 chrUextra 8251837 8252529 -20752127 - Copia2_I LTR Copia -127 4035 3205 8 647 7046 1 2 0 chrUextra 8252695 8253492 -20751164 + DOC LINE Jockey 731 1529 -3196 8 647 4565 23 64 5 chrUextra 8253812 8254389 -20750267 + PROTOP_A DNA P 1 611 -494 8 647 3351 183 31 22 chrUextra 8254492 8255286 -20749370 + SAR_DM Satellite Satellite 1 801 -396 8 647 2198 0 4 4 chrUextra 8255386 8255634 -20749022 + BEL_I LTR Pao 5157 5404 0 8 647 3223 0 11 0 chrUextra 8255634 8255991 -20748665 + BEL_LTR LTR Pao 1 361 0 8 647 1478 31 26 0 chrUextra 8255991 8256183 -20748473 - QUASIMODO_I LTR Gypsy -951 5109 4913 8 80 5769 103 6 0 chrUextra 8257180 8257977 -20746679 - Gypsy12_I LTR Gypsy -1114 4432 3631 8 648 2532 118 54 15 chrUextra 8258077 8258874 -20745782 + DMSAT6 Satellite Satellite 1 828 -97 8 648 1639 271 7 7 chrUextra 8260126 8260668 -20743988 - Copia_I LTR Copia -2314 2279 1738 8 648 2816 188 40 15 chrUextra 8260773 8261564 -20743092 - SAR_DM Satellite Satellite -216 1256 195 8 648 329 176 42 92 chrUextra 8261689 8261808 -20742848 - Copia_I LTR Copia -80 4513 4401 8 648 22 56 0 0 chrUextra 8261853 8261889 -20742767 + AT_rich Low_complexity Low_complexity 1 36 0 8 648 2002 188 36 7 chrUextra 8262043 8262461 -20742195 + HETA LINE telomeric 4020 4449 -1632 8 648 2677 3 0 0 chrUextra 8262562 8262863 -20741793 - NOMAD_LTR LTR Gypsy -217 301 1 8 648 4286 4 0 0 chrUextra 8263459 8263937 -20740719 - DMRT1B LINE R1 -1762 3421 2944 8 648 2872 0 3 0 chrUextra 8263936 8264256 -20740400 - DMRT1B LINE R1 -2686 2497 2177 8 648 2243 175 16 13 chrUextra 8264356 8265153 -20739503 - SAR_DM Satellite Satellite -504 800 1 8 648 24 0 0 0 chrUextra 8266766 8266790 -20737866 + AT_rich Low_complexity Low_complexity 1 24 0 8 648 7171 2 0 0 chrUextra 8267047 8267843 -20736813 + R1_DM LINE R1 1439 2234 -3122 8 648 260 182 18 0 chrUextra 8267944 8267999 -20736657 - ARS406_DM Unknown Unknown -297 56 1 8 648 3333 189 32 8 chrUextra 8267951 8268739 -20735917 + SAR_DM Satellite Satellite 238 1044 -428 8 648 2089 8 0 0 chrUextra 8268839 8269074 -20735582 + DM297_I LTR Gypsy 566 800 -5367 8 648 4986 3 0 2 chrUextra 8269069 8269635 -20735021 + DM297_I LTR Gypsy 4745 5309 -858 8 648 2641 175 14 10 chrUextra 8269737 8270529 -20734127 - SAR_DM Satellite Satellite -435 795 1 8 648 413 117 0 0 chrUextra 8270830 8270890 -20733766 + FB4_DM DNA Tc1 1018 1077 -3012 8 648 908 128 5 11 chrUextra 8270915 8271104 -20733552 - S_DM DNA Tc1 0 1736 1549 8 648 22 56 0 0 chrUextra 8271215 8271251 -20733405 + AT_rich Low_complexity Low_complexity 1 36 0 8 648 6560 12 21 0 chrUextra 8271527 8271757 -20732899 + STALKER4_I LTR Gypsy 5083 5312 -1218 8 648 183 80 0 0 chrUextra 8271757 8271782 -20732874 + (CATA)n Simple_repeat Simple_repeat 4 28 0 8 648 6560 12 21 0 chrUextra 8271782 8272323 -20732333 + STALKER4_I LTR Gypsy 5313 5868 -662 8 648 2605 79 14 21 chrUextra 8272425 8273219 -20731437 - DMSAT6 Satellite Satellite -39 787 1 8 648 7000 13 0 0 chrUextra 8273319 8274115 -20730541 + FW_DM LINE Jockey 1495 2290 -2402 8 648 1647 70 137 22 chrUextra 8274215 8274493 -20730163 - IDEFIX_I LTR Gypsy -2022 3606 3297 8 648 1203 78 0 18 chrUextra 8274505 8274675 -20729981 - IDEFIX_I LTR Gypsy -2758 2870 2704 8 648 2746 33 3 0 chrUextra 8274674 8275010 -20729646 - IDEFIX_I LTR Gypsy -3030 2598 2262 8 648 6885 16 19 0 chrUextra 8276007 8276801 -20727855 - Gypsy4_I LTR Gypsy -3327 2961 2153 8 648 7040 1 0 0 chrUextra 8276903 8277699 -20726957 - QUASIMODO_I LTR Gypsy -3597 2463 1668 8 648 3389 100 87 20 chrUextra 8277799 8278434 -20726222 + PROTOP_B DNA P 477 1153 0 8 648 3354 173 16 9 chrUextra 8278695 8279458 -20725198 - SAR_DM Satellite Satellite -459 1013 246 8 648 476 577 0 0 chrUextra 8279418 8279607 -20725049 + ARS406_DM Unknown Unknown 1 189 -164 8 648 6743 2 1 4 chrUextra 8279591 8280387 -20724269 - LSU-rRNA_Dme rRNA rRNA -2484 1416 623 8 648 4103 51 66 0 chrUextra 8280490 8281280 -20723376 - DMCR1A LINE CR1 -920 3550 2709 8 648 276 281 104 86 chrUextra 8281657 8281937 -20722719 - Invader1_LTR LTR Gypsy -55 368 84 8 648 4426 121 64 1 chrUextra 8282279 8283071 -20721585 + IDEFIX_I LTR Gypsy 3360 4201 -1427 8 648 510 16 0 0 chrUextra 8283175 8283236 -20721420 + ARS406_DM Unknown Unknown 129 189 -164 8 648 3057 188 18 19 chrUextra 8283186 8283971 -20720685 - SAR_DM Satellite Satellite -255 1217 434 8 648 21 89 0 0 chrUextra 8284776 8284832 -20719824 + AT_rich Low_complexity Low_complexity 1 56 0 8 648 213 65 0 0 chrUextra 8284968 8284999 -20719657 + (TAA)n Simple_repeat Simple_repeat 2 32 0 8 648 1843 105 10 3 chrUextra 8285011 8285299 -20719357 + MDG1_LTR LTR Gypsy 123 412 -30 8 648 2598 33 30 102 chrUextra 8285300 8285739 -20718917 + DMCR1A LINE CR1 1 407 -4063 8 648 3127 186 33 27 chrUextra 8285863 8286659 -20717997 - SAR_DM Satellite Satellite -542 800 1 8 648 1855 162 50 13 chrUextra 8286759 8287237 -20717419 + DOC4_DM LINE Jockey 2532 2791 0 8 648 833 87 113 7 chrUextra 8287403 8287553 -20717103 + G3_DM LINE Jockey 82 247 -4358 8 648 2462 121 12 25 chrUextra 8287655 8288450 -20716206 + DMSAT6 Satellite Satellite 1 785 -74 8 648 296 23 0 0 chrUextra 8289303 8289347 -20715309 + TART LINE telomeric 9210 9253 -5224 8 648 3668 5 0 0 chrUextra 8289447 8289869 -20714787 - ROO_LTR LTR Pao -6 422 1 8 648 4914 104 1 0 chrUextra 8290344 8291138 -20713518 - TART_B1 LINE telomeric -8841 1813 1019 8 648 3347 183 9 10 chrUextra 8291245 8292035 -20712621 + SAR_DM Satellite Satellite 195 983 -489 8 648 6902 4 2 0 chrUextra 8292135 8292931 -20711725 + LINEJ1_DM LINE Jockey 2991 3788 -1232 8 648 3691 172 8 9 chrUextra 8293036 8293827 -20710829 - SAR_DM Satellite Satellite -425 1047 258 8 648 2167 23 4 0 chrUextra 8293927 8294191 -20710465 - CIRCE LINE Composite -6091 265 1 8 648 4323 26 17 0 chrUextra 8294191 8294723 -20709933 - CIRCE LINE Composite 0 6356 5816 8 648 2914 199 21 25 chrUextra 8294823 8295619 -20709037 + SAR_DM Satellite Satellite 416 1208 -264 8 648 3711 14 0 0 chrUextra 8295719 8296155 -20708501 - Copia2_I LTR Copia -201 3961 3526 8 648 277 51 0 0 chrUextra 8296476 8296515 -20708141 - Copia2_LTR_DM LTR Copia 0 198 160 8 648 3022 212 19 14 chrUextra 8296615 8297405 -20707251 + TABOR_I LTR Gypsy 4351 5144 -1192 8 648 2333 150 108 21 chrUextra 8297691 8298307 -20706349 + TART LINE telomeric 8952 9568 -4909 8 648 247 248 76 76 chrUextra 8298494 8298599 -20706057 - MICROPIA_I LTR Gypsy -4371 105 1 8 648 1241 133 0 55 chrUextra 8298918 8299173 -20705483 - TAHRE LINE telomeric -9832 631 391 8 648 2876 192 8 11 chrUextra 8299303 8300098 -20704558 + SAR_DM Satellite Satellite 195 1256 -216 8 648 6768 10 0 1 chrUextra 8300199 8300995 -20703661 + DOC2_DM LINE Jockey 3667 4461 -332 8 648 514 162 0 49 chrUextra 8301095 8301218 -20703438 - ARS406_DM Unknown Unknown -236 117 1 8 648 2973 183 25 17 chrUextra 8301115 8301887 -20702769 + SAR_DM Satellite Satellite 191 968 -504 8 648 6377 19 10 4 chrUextra 8301991 8302787 -20701869 - R1_DM LINE R1 -844 4512 3712 8 648 6469 14 0 1 chrUextra 8302887 8303683 -20700973 + QUASIMODO_I LTR Gypsy 2901 3695 -2365 8 648 6791 1 0 0 chrUextra 8303783 8304579 -20700077 - LSU-rRNA_Dme rRNA rRNA -2649 1251 456 8 648 5359 5 0 0 chrUextra 8304679 8305298 -20699358 + Gypsy4_I LTR Gypsy 5670 6288 0 8 648 1165 30 6 68 chrUextra 8305298 8305475 -20699181 + Gypsy4_LTR LTR Gypsy 1 166 -121 8 648 3818 15 0 0 chrUextra 8305575 8306038 -20698618 + FW_DM LINE Jockey 4230 4692 0 8 648 1137 73 0 0 chrUextra 8306471 8306636 -20698020 - ARS406_DM Unknown Unknown -188 165 1 8 648 3072 187 7 8 chrUextra 8306540 8307267 -20697389 + SAR_DM Satellite Satellite 192 917 -555 8 648 2358 183 55 19 chrUextra 8307372 8308163 -20696493 + SAR_DM Satellite Satellite 1 819 -216 8 648 816 250 0 0 chrUextra 8308270 8308454 -20696202 - Gypsy3_I LTR Gypsy -3377 2800 2617 8 648 4560 17 2 42 chrUextra 8308444 8309059 -20695597 + DOC2_DM LINE Jockey 360 949 -3844 8 648 3875 192 0 4 chrUextra 8309159 8309955 -20694701 - Gypsy5_I LTR Gypsy -4691 1818 1026 8 648 6808 4 0 0 chrUextra 8310055 8310851 -20693805 + R1_DM LINE R1 2707 3502 -1854 8 648 757 147 160 0 chrUextra 8310974 8311130 -20693526 - DOC LINE Jockey -1739 2986 2806 8 648 2574 89 239 39 chrUextra 8311127 8311740 -20692916 - DOC LINE Jockey -2108 2617 1883 8 648 1065 93 0 0 chrUextra 8312198 8312642 -20692014 + (ACATG)n Simple_repeat Simple_repeat 1 444 0 8 648 3233 13 22 4 chrUextra 8312743 8313240 -20691416 - ROO_I LTR Pao -7651 605 1 8 648 2624 3 0 0 chrUextra 8313240 8313539 -20691117 - ROO_LTR LTR Pao 0 428 130 8 648 3367 5 0 0 chrUextra 8313639 8314030 -20690626 - NOMAD_LTR LTR Gypsy -14 504 114 8 648 3565 0 0 0 chrUextra 8314030 8314435 -20690221 - NOMAD_I LTR Gypsy 0 6572 6168 8 648 6645 15 1 0 chrUextra 8314535 8315331 -20689325 - DMRT1B LINE R1 -1621 3562 2766 8 648 3026 174 39 15 chrUextra 8315431 8316227 -20688429 - SAR_DM Satellite Satellite -685 814 1 8 648 364 0 0 22 chrUextra 8316327 8316373 -20688283 - NTS_DM Other Other -158 82 38 8 648 840 9 0 35 chrUextra 8316373 8316486 -20688170 - NTS_DM Other Other -107 133 25 8 648 1252 18 0 6 chrUextra 8316538 8316703 -20687953 - NTS_DM Other Other -39 201 38 8 648 1142 0 0 0 chrUextra 8316703 8316836 -20687820 - NTS_DM Other Other -107 133 1 8 648 1757 0 25 17 chrUextra 8316836 8317074 -20687582 - NTS_DM Other Other 0 240 1 8 648 256 0 82 61 chrUextra 8317074 8317123 -20687533 - NTS_DM Other Other 0 240 191 8 648 4661 20 52 0 chrUextra 8317223 8318019 -20686637 - R1_DM LINE R1 -1666 3690 2854 8 648 5878 25 49 1 chrUextra 8318119 8318874 -20685782 - DOC3_DM LINE Jockey -945 3795 3005 8 648 282 48 24 0 chrUextra 8318873 8318915 -20685741 - DOC3_DM LINE Jockey -1886 2854 2812 8 648 6564 14 33 0 chrUextra 8319015 8319811 -20684845 - Copia2_I LTR Copia -1920 2242 1421 8 648 3373 184 11 11 chrUextra 8319911 8320702 -20683954 + SAR_DM Satellite Satellite 257 1047 -425 8 648 2527 117 21 13 chrUextra 8320807 8321603 -20683053 + DMSAT6 Satellite Satellite 1 802 -245 8 648 3386 175 10 18 chrUextra 8321703 8322498 -20682158 + SAR_DM Satellite Satellite 302 1090 -382 8 648 6648 2 0 0 chrUextra 8322599 8323394 -20681262 + Copia_I LTR Copia 1916 2710 -1883 8 648 6686 0 2 0 chrUextra 8323494 8324289 -20680367 - TABOR_I LTR Gypsy -5131 1205 409 8 648 292 207 97 32 chrUextra 8324394 8324549 -20680107 + (CAAGA)n Simple_repeat Simple_repeat 3 167 0 8 648 364 219 105 0 chrUextra 8324566 8324882 -20679774 + (CAAGA)n Simple_repeat Simple_repeat 1 349 0 8 648 1186 0 7 0 chrUextra 8325285 8325429 -20679227 - BLASTOPIA_I LTR Gypsy -4336 145 1 8 648 2140 15 7 11 chrUextra 8325429 8325705 -20678951 - BLASTOPIA_LTR LTR Gypsy 0 275 1 8 648 808 17 32 24 chrUextra 8325705 8325823 -20678833 + NTS_DM Other Other 122 240 0 8 648 1847 4 17 13 chrUextra 8325823 8326062 -20678594 + NTS_DM Other Other 1 240 0 8 648 3622 170 9 9 chrUextra 8326180 8326971 -20677685 - SAR_DM Satellite Satellite -430 1042 252 8 648 6316 25 35 0 chrUextra 8327074 8327869 -20676787 - FW_DM LINE Jockey -624 4068 3246 8 648 6735 6 0 0 chrUextra 8327969 8328764 -20675892 - R1_DM LINE R1 -1788 3568 2774 8 648 975 24 0 0 chrUextra 8328866 8328992 -20675664 - IDEFIX_LTR LTR Gypsy -468 126 1 8 648 244 125 0 0 chrUextra 8328960 8329000 -20675656 + BARI1 DNA Tc1 3 42 -1708 8 648 270 149 0 0 chrUextra 8329063 8329110 -20675546 + GTWIN_I LTR Gypsy 4931 4977 -1444 8 648 22 0 0 0 chrUextra 8329150 8329172 -20675484 + AT_rich Low_complexity Low_complexity 1 22 0 8 648 205 191 0 0 chrUextra 8329227 8329269 -20675387 + A-rich Low_complexity Low_complexity 1 42 0 8 648 275 260 9 71 chrUextra 8329397 8329509 -20675147 + MDG1_I LTR Gypsy 1358 1462 -5134 8 648 3363 188 8 8 chrUextra 8329761 8330545 -20674111 + SAR_DM Satellite Satellite 259 1042 -430 8 648 2342 113 19 37 chrUextra 8330654 8331449 -20673207 + DMSAT6 Satellite Satellite 1 780 -6 8 648 2559 185 63 23 chrUextra 8331549 8332342 -20672314 - SAR_DM Satellite Satellite -615 824 1 8 648 1940 288 19 14 chrUextra 8332505 8333238 -20671418 - FROGGER_I LTR Copia -547 1530 794 8 648 200 111 28 0 chrUextra 8333339 8333375 -20671281 + (TA)n Simple_repeat Simple_repeat 2 38 0 8 648 2316 8 0 0 chrUextra 8333375 8333641 -20671015 - DMLTR5 LTR Gypsy 0 266 1 8 648 4068 12 0 0 chrUextra 8333641 8334134 -20670522 - HMSBEAGLE_I LTR Gypsy 0 6529 6037 8 648 766 72 9 0 chrUextra 8334237 8334348 -20670308 - R1_DM LINE R1 -5222 134 23 8 648 4891 28 2 3 chrUextra 8334369 8334974 -20669682 - R1_DM LINE R1 0 5356 4753 8 648 340 111 0 0 chrUextra 8334975 8335029 -20669627 + R1_DM LINE R1 409 462 -4894 8 648 5307 62 21 4 chrUextra 8335129 8335874 -20668782 - R1_DM LINE R1 -4598 758 1 8 648 6669 5 15 0 chrUextra 8336024 8336819 -20667837 - DM176_I LTR Gypsy -3412 3008 2202 8 648 1070 128 0 5 chrUextra 8337033 8337230 -20667426 + NTS_DM Other Other 1 196 -44 8 648 1019 147 38 21 chrUextra 8337447 8337683 -20666973 + NTS_DM Other Other 1 240 0 8 648 3906 195 0 1 chrUextra 8337816 8338608 -20666048 - ROVER-I_DM LTR Gypsy -2489 4095 3305 8 648 733 105 229 0 chrUextra 8339092 8339245 -20665411 + FB4_DM DNA Tc1 3 190 -3899 8 648 620 93 41 0 chrUextra 8339238 8339335 -20665321 - Baggins1 LINE LOA -626 4827 4727 8 648 6289 16 1 9 chrUextra 8339604 8340399 -20664257 - QUASIMODO_I LTR Gypsy -4142 1918 1130 8 648 235 0 0 0 chrUextra 8340499 8340528 -20664128 + HOBO DNA hAT 875 903 -2113 8 648 4335 0 0 10 chrUextra 8340529 8341031 -20663625 + HOBO DNA hAT 2520 3016 0 8 648 659 180 13 51 chrUextra 8341435 8341593 -20663063 + HETRP_DM Satellite Satellite 1518 1669 -203 8 648 655 186 7 14 chrUextra 8341756 8341898 -20662758 + HETRP_DM Satellite Satellite 1529 1669 -203 8 648 282 29 0 0 chrUextra 8342029 8342064 -20662592 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 648 502 217 8 8 chrUextra 8342064 8342185 -20662471 + HETRP_DM Satellite Satellite 1549 1669 -203 8 648 728 307 16 16 chrUextra 8342289 8342673 -20661983 + Gypsy4_I LTR Gypsy 2234 2784 -3504 8 648 1510 23 19 0 chrUextra 8342507 8342721 -20661935 + TLD2 Unknown Unknown 1 218 0 8 648 458 340 10 10 chrUextra 8342732 8343031 -20661625 + GTWIN_I LTR Gypsy 3323 3538 -2883 8 648 1376 76 20 0 chrUextra 8343184 8343382 -20661274 + IDEFIX_I LTR Gypsy 4747 4948 -680 8 648 4565 40 16 2 chrUextra 8343373 8343979 -20660677 + IDEFIX_I LTR Gypsy 780 1394 -4234 8 648 2636 188 34 9 chrUextra 8344079 8344874 -20659782 + SAR_DM Satellite Satellite 1 815 -707 8 648 6349 23 4 4 chrUextra 8344974 8345769 -20658887 + R1_DM LINE R1 3249 4043 -1313 8 648 3306 185 18 10 chrUextra 8345869 8346646 -20658010 - SAR_DM Satellite Satellite -443 1029 247 8 648 285 140 18 0 chrUextra 8346607 8346664 -20657992 + ARS406_DM Unknown Unknown 1 58 -295 8 648 1252 18 0 6 chrUextra 8346785 8346950 -20657706 - NTS_DM Other Other -39 201 38 8 648 870 9 0 27 chrUextra 8346950 8347062 -20657594 - NTS_DM Other Other -107 133 25 8 648 1252 18 0 6 chrUextra 8347114 8347279 -20657377 - NTS_DM Other Other -39 201 38 8 648 870 9 0 27 chrUextra 8347279 8347391 -20657265 - NTS_DM Other Other -107 133 25 8 648 22 56 0 0 chrUextra 8347417 8347453 -20657203 + AT_rich Low_complexity Low_complexity 1 36 0 8 648 243 125 0 0 chrUextra 8347466 8347506 -20657150 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 648 3456 176 10 10 chrUextra 8347662 8348454 -20656202 + SAR_DM Satellite Satellite 246 1037 -435 8 648 4393 15 2 0 chrUextra 8348554 8349081 -20655575 - R1_DM LINE R1 -26 5330 4803 8 648 584 42 0 0 chrUextra 8349084 8349156 -20655500 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2578 8 648 1623 15 0 0 chrUextra 8349152 8349349 -20655307 - R2_DM LINE R2 -3 3604 3408 8 648 790 191 83 93 chrUextra 8349449 8349750 -20654906 + TIRANT_LTR LTR Gypsy 12 309 -108 8 648 397 176 11 42 chrUextra 8349904 8349999 -20654657 + TIRANT_I LTR Gypsy 1 92 -7600 8 648 237 312 15 66 chrUextra 8350048 8350185 -20654471 + TIRANT_I LTR Gypsy 581 710 -6982 8 648 4755 37 24 0 chrUextra 8350344 8350963 -20653693 + DOC3_DM LINE Jockey 816 1449 -3291 8 648 946 70 5 18 chrUextra 8351239 8351999 -20652657 + RSP Satellite Satellite 1 750 0 8 648 2723 213 14 21 chrUextra 8352134 8352929 -20651727 + SAR_DM Satellite Satellite 419 1207 -265 8 648 5672 70 10 6 chrUextra 8353031 8353824 -20650832 + R1_DM LINE R1 1348 2143 -3213 8 648 3487 174 13 9 chrUextra 8353927 8354716 -20649940 - SAR_DM Satellite Satellite -435 1037 246 8 648 4952 2 0 0 chrUextra 8354819 8355386 -20649270 + DOC2_DM LINE Jockey 3693 4259 -534 8 648 1553 19 68 0 chrUextra 8355384 8355590 -20649066 + DOC2_DM LINE Jockey 4574 4793 0 8 648 1445 127 84 11 chrUextra 8355714 8356001 -20648655 + Invader1_I LTR Gypsy 2879 3186 0 8 648 1241 135 67 41 chrUextra 8356001 8356271 -20648385 + Invader1_LTR LTR Gypsy 1 277 -146 8 648 2738 25 75 0 chrUextra 8357044 8357404 -20647252 + PROTOP_A DNA P 1 387 -718 8 648 3248 180 13 14 chrUextra 8357504 8358299 -20646357 - SAR_DM Satellite Satellite -467 1005 212 8 648 2360 114 14 21 chrUextra 8358430 8359194 -20645462 + DMSAT6 Satellite Satellite 1 758 0 8 648 6814 13 0 0 chrUextra 8359294 8360089 -20644567 - Gypsy12_I LTR Gypsy -1752 3794 3000 8 648 3160 184 9 13 chrUextra 8360191 8360958 -20643698 - SAR_DM Satellite Satellite -514 958 195 8 648 714 92 8 8 chrUextra 8360864 8360984 -20643672 + ARS406_DM Unknown Unknown 1 120 -233 8 648 4409 2 0 0 chrUextra 8361084 8361612 -20643044 - Copia_I LTR Copia -650 3943 3416 8 648 2239 4 0 0 chrUextra 8361605 8361879 -20642777 - Copia_I LTR Copia -1630 2963 2690 8 648 393 52 17 0 chrUextra 8361979 8362037 -20642619 - ARS406_DM Unknown Unknown -205 148 90 8 648 2957 198 12 19 chrUextra 8362036 8362774 -20641882 + SAR_DM Satellite Satellite 1 732 -216 8 648 2715 19 0 0 chrUextra 8362874 8363197 -20641459 - MICROPIA_I LTR Gypsy -3410 1066 744 8 648 2707 22 110 2 chrUextra 8363188 8363669 -20640987 - MICROPIA_I LTR Gypsy -3841 635 103 8 648 2607 169 9 9 chrUextra 8363790 8364558 -20640098 + SAR_DM Satellite Satellite 1 768 -539 8 648 3203 41 117 2 chrUextra 8364663 8365272 -20639384 - R1_DM LINE R1 -3882 1474 796 8 648 1434 62 0 0 chrUextra 8365262 8365457 -20639199 - R1_DM LINE R1 -4765 591 397 8 648 697 104 0 9 chrUextra 8365557 8365673 -20638983 - ARS406_DM Unknown Unknown -238 115 1 8 648 3246 178 9 21 chrUextra 8365576 8366351 -20638305 + SAR_DM Satellite Satellite 192 957 -515 8 648 1620 24 0 0 chrUextra 8366451 8367072 -20637584 + (GAGAA)n Simple_repeat Simple_repeat 1 621 0 8 648 327 23 0 0 chrUextra 8367345 8367388 -20637268 - ARS406_DM Unknown Unknown -233 120 78 8 648 674 116 0 8 chrUextra 8367377 8367499 -20637157 - ARS406_DM Unknown Unknown -232 121 1 8 648 3001 177 10 11 chrUextra 8367402 8368115 -20636541 + SAR_DM Satellite Satellite 192 903 -569 8 648 794 20 0 0 chrUextra 8368027 8368125 -20636531 - ARS406_DM Unknown Unknown -166 187 90 8 648 533 0 16 0 chrUextra 8368239 8368303 -20636353 - DM176_I LTR Gypsy -6355 65 1 8 648 2005 24 16 0 chrUextra 8368303 8368556 -20636100 - DM176_LTR LTR Gypsy 0 507 251 8 648 2272 14 0 34 chrUextra 8368557 8368850 -20635806 - DM176_LTR LTR Gypsy -224 283 1 8 648 4868 17 137 1 chrUextra 8369133 8369836 -20634820 - DOC2_DM LINE Jockey -2430 2363 1566 8 648 337 111 0 0 chrUextra 8369872 8369926 -20634730 - DMCR1A LINE CR1 0 4470 4417 8 648 5270 112 4 0 chrUextra 8370027 8370816 -20633840 + HMSBEAGLE_I LTR Gypsy 4761 5552 -977 8 648 3029 180 24 32 chrUextra 8370923 8371715 -20632941 - SAR_DM Satellite Satellite -261 1211 426 8 648 1620 40 0 0 chrUextra 8371816 8372139 -20632517 + (CAAGA)n Simple_repeat Simple_repeat 1 323 0 8 648 525 71 0 0 chrUextra 8372139 8372209 -20632447 + (CAAGG)n Simple_repeat Simple_repeat 1 70 0 8 648 1529 6 0 6 chrUextra 8372209 8372388 -20632268 + (CAAGA)n Simple_repeat Simple_repeat 1 178 0 8 648 1920 5 0 0 chrUextra 8372388 8372609 -20632047 + TABOR_LTR LTR Gypsy 1 221 -285 8 648 458 29 0 14 chrUextra 8372709 8372779 -20631877 + TART_B1 LINE telomeric 3584 3652 -7002 8 648 4469 116 26 15 chrUextra 8372776 8373503 -20631153 + TART_B1 LINE telomeric 4297 5031 -5623 8 648 1597 75 89 19 chrUextra 8373603 8373861 -20630795 - Gypsy12_I LTR Gypsy -3908 1638 1363 8 648 2282 113 2 47 chrUextra 8373863 8374397 -20630259 - Gypsy12_I LTR Gypsy -4751 795 231 8 648 3269 31 111 0 chrUextra 8374666 8375116 -20629540 + PROTOP DNA P 1 500 -3980 8 648 1426 34 0 0 chrUextra 8375115 8375291 -20629365 + PROTOP DNA P 111 286 -4194 8 648 3340 169 12 13 chrUextra 8375399 8376167 -20628489 - SAR_DM Satellite Satellite -514 958 192 8 648 708 97 0 9 chrUextra 8376070 8376185 -20628471 + ARS406_DM Unknown Unknown 1 114 -239 8 648 342 85 0 0 chrUextra 8376285 8376332 -20628324 - HMSBEAGLE_I LTR Gypsy -6249 280 234 8 648 1019 97 0 0 chrUextra 8376342 8376486 -20628170 - HMSBEAGLE_I LTR Gypsy -1505 5024 4881 8 648 3991 105 55 0 chrUextra 8376480 8377079 -20627577 - HMSBEAGLE_I LTR Gypsy -1756 4773 4142 8 648 6612 21 0 0 chrUextra 8377179 8377973 -20626683 + R1_DM LINE R1 4046 4839 -517 8 648 507 29 0 0 chrUextra 8378073 8378142 -20626514 + DMCR1A LINE CR1 4402 4470 0 8 648 583 122 0 0 chrUextra 8378150 8378240 -20626416 - Gypsy12_LTR LTR Gypsy -307 2029 1940 8 648 1410 191 178 40 chrUextra 8378239 8378867 -20625789 - Gypsy12_LTR LTR Gypsy -594 1742 1028 8 648 4939 18 25 0 chrUextra 8378967 8379579 -20625077 + R1_DM LINE R1 4440 5066 -290 8 648 924 44 0 0 chrUextra 8379576 8379690 -20624966 + R1_DM LINE R1 5243 5356 0 8 648 295 53 0 0 chrUextra 8379723 8379761 -20624895 + R1_DM LINE R1 1 38 -5318 8 648 6741 0 1 1 chrUextra 8380755 8381549 -20623107 - ROO_I LTR Pao -259 7997 7204 8 648 2561 22 0 0 chrUextra 8382543 8382860 -20621796 + FW_DM LINE Jockey 2927 3243 -1449 8 648 3082 60 1 17 chrUextra 8382860 8383300 -20621356 - STALKER4_LTR LTR Gypsy -10 392 1 8 648 316 0 0 0 chrUextra 8383300 8383337 -20621319 - STALKER4_I LTR Gypsy 0 6530 6494 8 648 437 216 14 21 chrUextra 8383437 8383579 -20621077 + XDMR_DM Unknown Unknown 220 360 0 8 648 3241 174 16 18 chrUextra 8383458 8384231 -20620425 - SAR_DM Satellite Satellite -313 1159 389 8 648 6383 20 4 0 chrUextra 8384331 8385125 -20619531 + ROO_I LTR Pao 1323 2119 -6137 8 648 318 26 0 0 chrUextra 8385225 8385264 -20619392 + ARS406_DM Unknown Unknown 123 161 -192 8 648 1528 160 37 24 chrUextra 8385229 8385835 -20618821 - SAR_DM Satellite Satellite -242 614 1 8 648 1266 13 0 7 chrUextra 8385848 8386002 -20618654 + DOC2_DM LINE Jockey 10 162 -4631 8 648 27 49 0 0 chrUextra 8386776 8386817 -20617839 + AT_rich Low_complexity Low_complexity 1 41 0 8 648 360 121 96 0 chrUextra 8386830 8386913 -20617743 - TART LINE telomeric -3988 10489 10399 8 648 3216 185 6 17 chrUextra 8387013 8387798 -20616858 - SAR_DM Satellite Satellite -1036 776 1 8 649 6904 0 0 0 chrUextra 8389695 8390489 -20614167 - BARI_DM DNA Tc1 -93 1635 842 8 649 2346 105 18 12 chrUextra 8390590 8391381 -20613275 - DMSAT6 Satellite Satellite -11 796 1 8 649 824 18 0 67 chrUextra 8391483 8391603 -20613053 - Gypsy4_I LTR Gypsy -6060 228 117 8 649 2120 46 7 37 chrUextra 8391619 8391915 -20612741 - Gypsy4_LTR LTR Gypsy 0 287 1 8 649 1043 90 18 12 chrUextra 8392024 8392193 -20612463 + HOBO DNA hAT 23 192 -2824 8 649 3085 189 14 21 chrUextra 8392377 8393170 -20611486 - SAR_DM Satellite Satellite -261 1211 425 8 649 1764 14 9 0 chrUextra 8393271 8393485 -20611171 - R1_DM LINE R1 -734 4622 4407 8 649 4598 16 2 2 chrUextra 8393505 8394065 -20610591 - R1_DM LINE R1 -1074 4282 3723 8 649 1325 21 21 21 chrUextra 8394165 8394358 -20610298 - NTS_DM Other Other -10 230 38 8 649 870 9 0 27 chrUextra 8394358 8394470 -20610186 - NTS_DM Other Other -107 133 25 8 649 25 51 0 0 chrUextra 8394493 8394532 -20610124 + AT_rich Low_complexity Low_complexity 1 39 0 8 649 261 125 0 0 chrUextra 8394545 8394585 -20610071 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 649 246 150 0 0 chrUextra 8394637 8394677 -20609979 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 649 29 28 0 0 chrUextra 8394682 8394718 -20609938 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 1458 0 6 0 chrUextra 8394790 8394959 -20609697 - LSU-rRNA_Dme rRNA rRNA 0 3900 3731 8 649 1522 161 3 7 chrUextra 8395062 8395363 -20609293 + SAR_DM Satellite Satellite 604 903 -569 8 649 832 108 0 92 chrUextra 8395370 8395544 -20609112 - ARS406_DM Unknown Unknown -195 158 1 8 649 1745 192 2 2 chrUextra 8395430 8395827 -20608829 + SAR_DM Satellite Satellite 531 927 -545 8 649 837 0 0 0 chrUextra 8395953 8396053 -20608603 - NOMAD_LTR LTR Gypsy -418 100 1 8 649 36 55 0 52 chrUextra 8396347 8396463 -20608193 + AT_rich Low_complexity Low_complexity 1 110 0 8 649 1800 9 0 0 chrUextra 8396536 8396747 -20607909 + SSU-rRNA_Dme rRNA rRNA 1 211 -1784 8 649 2866 189 11 26 chrUextra 8396848 8397641 -20607015 - SAR_DM Satellite Satellite -601 781 1 8 649 6811 4 0 0 chrUextra 8397741 8398533 -20606123 + FW_DM LINE Jockey 1207 1998 -2694 8 649 22 56 0 0 chrUextra 8398737 8398773 -20605883 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 424 107 107 0 chrUextra 8399529 8399613 -20605043 - TART LINE telomeric -4950 9527 9435 8 649 2065 202 43 16 chrUextra 8399616 8400169 -20604487 - TAHRE LINE telomeric -2590 7873 7306 8 649 650 25 0 0 chrUextra 8400243 8400323 -20604333 + G2_DM LINE Jockey 2891 2970 -132 8 649 817 145 190 36 chrUextra 8400938 8401217 -20603439 - MAX_I LTR Pao -7347 567 246 8 649 2335 108 18 37 chrUextra 8401317 8402105 -20602551 - DMSAT6 Satellite Satellite -77 772 1 8 649 3028 185 10 16 chrUextra 8402215 8402983 -20601673 - SAR_DM Satellite Satellite -514 958 195 8 649 659 115 0 9 chrUextra 8402889 8403003 -20601653 + ARS406_DM Unknown Unknown 1 113 -240 8 649 6714 4 4 2 chrUextra 8403103 8403896 -20600760 - LSU-rRNA_Dme rRNA rRNA -2146 1754 961 8 649 4322 14 0 0 chrUextra 8403998 8404504 -20600152 - Gypsy4_I LTR Gypsy -133 6155 5650 8 649 2262 14 0 0 chrUextra 8404509 8404788 -20599868 - Gypsy4_I LTR Gypsy -890 5398 5120 8 649 3042 197 14 19 chrUextra 8404889 8405682 -20598974 - SAR_DM Satellite Satellite -257 1215 427 8 649 242 331 0 0 chrUextra 8405784 8405923 -20598733 - ROVER-I_DM LTR Gypsy -3870 2714 2576 8 649 1363 12 6 6 chrUextra 8405901 8406069 -20598587 + TLD3 Unknown Unknown 2 169 -3 8 649 470 284 28 28 chrUextra 8406041 8406331 -20598325 - DM176_I LTR Gypsy -4292 2128 1839 8 649 1360 22 0 11 chrUextra 8406678 8406858 -20597798 - NTS_DM Other Other -62 178 1 8 649 813 6 363 22 chrUextra 8406858 8407037 -20597619 - NTS_DM Other Other 0 240 1 8 649 1438 15 20 20 chrUextra 8407037 8407240 -20597416 - NTS_DM Other Other 0 240 38 8 649 870 9 0 27 chrUextra 8407240 8407352 -20597304 - NTS_DM Other Other -107 133 25 8 649 398 48 0 16 chrUextra 8407404 8407468 -20597188 - NTS_DM Other Other -39 201 139 8 649 6590 15 0 1 chrUextra 8407568 8408361 -20596295 + DMRT1B LINE R1 1577 2368 -2815 8 649 4067 43 3 7 chrUextra 8408653 8409246 -20595410 - PROTOP_A DNA P 0 1105 570 8 649 2000 4 0 0 chrUextra 8409354 8409583 -20595073 + ROO_LTR LTR Pao 200 428 0 8 649 4557 4 0 23 chrUextra 8409583 8410147 -20594509 + ROO_I LTR Pao 1 551 -7705 8 649 6840 1 0 0 chrUextra 8410247 8411040 -20593616 + TART LINE telomeric 5286 6078 -8399 8 649 3049 192 28 18 chrUextra 8411140 8411915 -20592741 - SAR_DM Satellite Satellite -321 1151 369 8 649 2325 83 45 15 chrUextra 8412033 8412826 -20591830 + DMSAT6 Satellite Satellite 1 817 -29 8 649 818 220 134 15 chrUextra 8412931 8413509 -20591147 + TART LINE telomeric 3318 4029 -10448 8 649 477 240 19 38 chrUextra 8413484 8413644 -20591012 + TART_B1 LINE telomeric 8329 8485 -2169 8 649 585 27 0 0 chrUextra 8413646 8413719 -20590937 + TART LINE telomeric 10663 10735 -3742 8 649 1838 5 0 0 chrUextra 8413819 8414029 -20590627 + PROTOP_A DNA P 896 1105 0 8 649 1140 84 12 0 chrUextra 8414029 8414183 -20590473 + DOC3_DM LINE Jockey 1740 1895 -2845 8 649 3467 24 19 0 chrUextra 8414187 8414612 -20590044 + DOC3_DM LINE Jockey 2205 2637 -2103 8 649 1620 0 0 0 chrUextra 8415073 8415501 -20589155 + (CTATT)n Simple_repeat Simple_repeat 1 428 0 8 649 5120 19 14 3 chrUextra 8415605 8416247 -20588409 - R1_DM LINE R1 -1217 4139 3491 8 649 1165 20 0 7 chrUextra 8416249 8416398 -20588258 - R1_DM LINE R1 -2388 2968 2821 8 649 6342 18 1 0 chrUextra 8416498 8417291 -20587365 - QUASIMODO_I LTR Gypsy -4570 1490 697 8 649 6664 11 5 0 chrUextra 8417392 8418184 -20586472 + FW_DM LINE Jockey 690 1485 -3207 8 649 229 143 20 0 chrUextra 8418408 8418457 -20586199 - RSP Satellite Satellite -9 109 60 8 649 229 143 20 0 chrUextra 8418574 8418623 -20586033 - RSP Satellite Satellite -9 109 60 8 649 226 65 0 0 chrUextra 8418740 8418771 -20585885 - RSP Satellite Satellite -9 109 79 8 649 3741 2 0 0 chrUextra 8419177 8419608 -20585048 + ACCORD_LTR LTR Gypsy 128 558 0 8 649 1945 86 233 0 chrUextra 8419609 8419970 -20584686 - TART LINE telomeric -6575 7902 7458 8 649 3606 184 14 13 chrUextra 8420070 8420863 -20583793 - TAHRE LINE telomeric -56 10407 9614 8 649 288 140 20 0 chrUextra 8420963 8421013 -20583643 - HETRP_DM Satellite Satellite -293 1579 1529 8 649 487 240 0 16 chrUextra 8421164 8421287 -20583369 - HETRP_DM Satellite Satellite -203 1669 1549 8 649 498 17 0 0 chrUextra 8421287 8421346 -20583310 + (TC)n Simple_repeat Simple_repeat 2 60 0 8 649 625 200 7 14 chrUextra 8421477 8421619 -20583037 - HETRP_DM Satellite Satellite -203 1669 1529 8 649 24 53 0 0 chrUextra 8421707 8421745 -20582911 + AT_rich Low_complexity Low_complexity 1 38 0 8 649 6599 13 2 1 chrUextra 8421856 8422649 -20582007 + FW_DM LINE Jockey 92 885 -3807 8 649 741 85 0 8 chrUextra 8422749 8422867 -20581789 - ARS406_DM Unknown Unknown -236 117 1 8 649 3065 193 5 10 chrUextra 8422770 8423541 -20581115 + SAR_DM Satellite Satellite 192 958 -514 8 649 6347 15 44 4 chrUextra 8423642 8424435 -20580221 - MICROPIA_I LTR Gypsy -291 4185 3361 8 649 5417 0 2 0 chrUextra 8424535 8425152 -20579504 + LSU-rRNA_Dme rRNA rRNA 3283 3900 0 8 649 22 56 0 0 chrUextra 8425224 8425260 -20579396 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 246 150 0 0 chrUextra 8425265 8425305 -20579351 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 3418 178 8 14 chrUextra 8425429 8426221 -20578435 + SAR_DM Satellite Satellite 332 1118 -354 8 649 1588 0 0 0 chrUextra 8426321 8426505 -20578151 - ROO_I LTR Pao -8072 184 1 8 649 3742 2 0 0 chrUextra 8426505 8426933 -20577723 - ROO_LTR LTR Pao 0 428 1 8 649 1264 61 0 0 chrUextra 8426933 8427114 -20577542 - ROO_I LTR Pao 0 8256 8076 8 649 2138 186 13 21 chrUextra 8427214 8427746 -20576910 + SAR_DM Satellite Satellite 517 1044 -428 8 649 857 181 37 14 chrUextra 8427789 8428007 -20576649 + SAR_DM Satellite Satellite 543 765 -707 8 649 2262 125 57 132 chrUextra 8428107 8428900 -20575756 + BATUMI_I LTR Pao 421 1153 -6810 8 649 6804 1 0 0 chrUextra 8429000 8429793 -20574863 - DOC LINE Jockey -2559 2166 1374 8 649 1353 315 18 26 chrUextra 8429917 8430679 -20573977 - Invader6_I LTR Gypsy -1465 2634 1879 8 649 849 10 0 0 chrUextra 8430786 8430884 -20573772 + (TATAA)n Simple_repeat Simple_repeat 3 100 0 8 649 1479 19 0 0 chrUextra 8430902 8431170 -20573486 + (TATAA)n Simple_repeat Simple_repeat 1 268 0 8 649 2600 33 3 3 chrUextra 8431170 8431501 -20573155 - DM1731_LTR LTR Copia -1 335 5 8 649 648 26 0 0 chrUextra 8431501 8431579 -20573077 + (TATAA)n Simple_repeat Simple_repeat 4 81 0 8 649 22 35 0 0 chrUextra 8431695 8431724 -20572932 + AT_rich Low_complexity Low_complexity 1 29 0 8 649 284 48 24 0 chrUextra 8431823 8431865 -20572791 + (TAAAA)n Simple_repeat Simple_repeat 4 46 0 8 649 27 0 0 0 chrUextra 8431876 8431903 -20572753 + AT_rich Low_complexity Low_complexity 1 27 0 8 649 212 87 0 61 chrUextra 8431903 8431952 -20572704 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 8 649 337 0 0 0 chrUextra 8431971 8432011 -20572645 + STALKER4_I LTR Gypsy 6491 6530 0 8 649 2719 20 63 3 chrUextra 8432011 8432212 -20572444 + Stalker3_LTR LTR Gypsy 1 201 -171 8 649 207 0 0 0 chrUextra 8432212 8432235 -20572421 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 8 649 2719 20 63 3 chrUextra 8432235 8432384 -20572272 + Stalker3_LTR LTR Gypsy 202 370 -2 8 649 611 80 0 0 chrUextra 8432384 8432472 -20572184 - R1_DM LINE R1 -523 4833 4746 8 649 4117 33 138 10 chrUextra 8432572 8433365 -20571291 - BATUMI_I LTR Pao -5513 2450 1557 8 649 6508 24 0 0 chrUextra 8433468 8434258 -20570398 - R1_DM LINE R1 -1534 3822 3033 8 649 4466 17 2 0 chrUextra 8434358 8434891 -20569765 + R1_DM LINE R1 4823 5356 0 8 649 1597 75 9 0 chrUextra 8434924 8435151 -20569505 + R1_DM LINE R1 1 229 -5127 8 649 247 269 125 43 chrUextra 8435373 8435742 -20568914 - QUASIMODO_I LTR Gypsy 0 6060 5662 8 649 2769 9 3 0 chrUextra 8435715 8436044 -20568612 - IVK_DM LINE I 0 5402 5073 8 649 1288 176 11 22 chrUextra 8436147 8436420 -20568236 + DM176_I LTR Gypsy 4012 4281 -2139 8 649 1111 29 0 0 chrUextra 8436419 8436556 -20568100 - DMCR1A LINE CR1 -3534 936 800 8 649 2237 32 34 110 chrUextra 8436554 8436935 -20567721 - DMCR1A LINE CR1 -4063 407 56 8 649 320 287 13 0 chrUextra 8437052 8437202 -20567454 + I_DM LINE I 3822 3973 -2258 8 649 897 192 0 0 chrUextra 8437554 8437741 -20566915 - MDG1_I LTR Gypsy -4119 2477 2291 8 649 3367 174 9 19 chrUextra 8437937 8438723 -20565933 - SAR_DM Satellite Satellite -353 1119 342 8 649 6323 28 34 0 chrUextra 8438823 8439616 -20565040 - R1_DM LINE R1 -2654 2702 1883 8 649 4120 8 0 0 chrUextra 8439716 8440208 -20564448 + MDG3_I LTR Gypsy 2012 2503 -2483 8 649 2282 7 0 66 chrUextra 8440207 8440509 -20564147 + DOC6_DM LINE Jockey 1 282 -3940 8 649 946 70 5 19 chrUextra 8440616 8441372 -20563284 + RSP Satellite Satellite 1 745 0 8 649 4586 6 0 2 chrUextra 8441502 8442033 -20562623 - R2_DM LINE R2 -3075 532 3 8 649 2214 0 0 0 chrUextra 8442042 8442295 -20562361 - LSU-rRNA_Dme rRNA rRNA -1692 2208 1956 8 649 2363 7 0 0 chrUextra 8443288 8443565 -20561091 + MDG1_I LTR Gypsy 4081 4357 -2239 8 649 2984 14 0 0 chrUextra 8443565 8443921 -20560735 - MDG1_LTR LTR Gypsy 0 442 87 8 649 423 100 0 0 chrUextra 8443921 8443991 -20560665 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 649 526 33 8 0 chrUextra 8443995 8444081 -20560575 - MDG1_I LTR Gypsy 0 6596 6523 8 649 3583 0 2 0 chrUextra 8444181 8444590 -20560066 + SSU-rRNA_Dme rRNA rRNA 1586 1995 0 8 649 21 89 0 0 chrUextra 8444609 8444665 -20559991 + AT_rich Low_complexity Low_complexity 1 56 0 8 649 2093 19 4 25 chrUextra 8445074 8445351 -20559305 + BATUMI_I LTR Pao 7016 7286 -677 8 649 2011 141 1 2 chrUextra 8445341 8445867 -20558789 + G_DM LINE Jockey 622 1145 -897 8 649 3074 189 15 21 chrUextra 8445968 8446759 -20557897 + SAR_DM Satellite Satellite 432 1217 -255 8 649 6653 14 5 0 chrUextra 8446860 8447653 -20557003 - DMRT1B LINE R1 -2511 2672 1876 8 649 6486 25 1 0 chrUextra 8447753 8448546 -20556110 + R1_DM LINE R1 2924 3717 -1639 8 649 975 109 0 0 chrUextra 8448647 8449002 -20555654 + (TAA)n Simple_repeat Simple_repeat 1 355 0 8 649 28 0 0 0 chrUextra 8449004 8449032 -20555624 + AT_rich Low_complexity Low_complexity 1 28 0 8 649 975 116 0 0 chrUextra 8449165 8449439 -20555217 + (TAA)n Simple_repeat Simple_repeat 1 274 0 8 649 1388 6 6 0 chrUextra 8449539 8449705 -20554951 - DM1731_I LTR Copia -3809 167 1 8 649 2717 33 0 0 chrUextra 8449705 8450041 -20554615 - DM1731_LTR LTR Copia 0 336 1 8 649 2355 3 10 17 chrUextra 8450041 8450332 -20554324 - DM1731_I LTR Copia 0 3976 3688 8 649 24 32 0 0 chrUextra 8450740 8450771 -20553885 + AT_rich Low_complexity Low_complexity 1 31 0 8 649 245 279 0 0 chrUextra 8450777 8450845 -20553811 + Invader4_I LTR Gypsy 1235 1302 -1111 8 649 448 329 57 14 chrUextra 8450924 8451220 -20553436 + Invader6_I LTR Gypsy 1629 1937 -2162 8 649 235 146 0 0 chrUextra 8452217 8452258 -20552398 - DMCR1A LINE CR1 -3686 784 744 8 649 579 138 43 17 chrUextra 8452325 8452525 -20552131 + DMCR1A LINE CR1 365 460 -4010 8 649 3110 30 4 54 chrUextra 8452544 8453008 -20551648 + DOC5_DM LINE Jockey 3979 4419 -263 8 649 6619 14 0 0 chrUextra 8453108 8453900 -20550756 - FW_DM LINE Jockey -1577 3115 2324 8 649 2497 3 0 0 chrUextra 8454000 8454290 -20550366 - DOC LINE Jockey -4431 294 5 8 649 3224 46 16 45 chrUextra 8454287 8454792 -20549864 + ROO_I LTR Pao 144 633 -7623 8 649 551 0 131 6 chrUextra 8455818 8455978 -20548678 + (GA)n Simple_repeat Simple_repeat 1 180 0 8 649 616 134 46 17 chrUextra 8455967 8456141 -20548515 + GA-rich Low_complexity Low_complexity 1 179 0 8 649 6374 20 1 5 chrUextra 8456677 8457468 -20547188 + NINJA_I LTR Pao 4854 5641 -370 8 649 2996 0 0 0 chrUextra 8458460 8458802 -20545854 + LSU-rRNA_Dme rRNA rRNA 3559 3900 0 8 649 27 29 0 0 chrUextra 8458874 8458908 -20545748 + AT_rich Low_complexity Low_complexity 1 34 0 8 649 246 150 0 0 chrUextra 8458913 8458953 -20545703 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 246 150 0 0 chrUextra 8459005 8459045 -20545611 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 246 150 0 0 chrUextra 8459097 8459137 -20545519 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 255 125 0 0 chrUextra 8459180 8459220 -20545436 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 405 191 0 0 chrUextra 8459352 8459457 -20545199 + (CATAA)n Simple_repeat Simple_repeat 5 109 0 8 649 3964 17 0 8 chrUextra 8459458 8459943 -20544713 + T412LTR LTR LTR 1 481 0 8 649 4104 18 0 15 chrUextra 8459626 8460144 -20544512 + DM412 LTR Gypsy 1 510 -6387 8 649 954 24 0 45 chrUextra 8460244 8460378 -20544278 + Invader1_I LTR Gypsy 3059 3186 0 8 649 3647 5 2 0 chrUextra 8460378 8460800 -20543856 + Invader1_LTR LTR Gypsy 1 423 0 8 649 2045 0 0 4 chrUextra 8460800 8461036 -20543620 + Invader1_I LTR Gypsy 1 235 -2951 8 649 34 24 0 0 chrUextra 8461221 8461262 -20543394 + AT_rich Low_complexity Low_complexity 1 41 0 8 649 3380 175 13 16 chrUextra 8462033 8462819 -20541837 + SAR_DM Satellite Satellite 321 1103 -369 8 649 3428 181 9 9 chrUextra 8462926 8463712 -20540944 - SAR_DM Satellite Satellite -425 1047 262 8 649 601 300 47 39 chrUextra 8463839 8464258 -20540398 - BURDOCK_I LTR Gypsy -2361 3499 2969 8 649 865 38 15 0 chrUextra 8464473 8464604 -20540052 - TLD2 Unknown Unknown 0 218 86 8 649 3221 181 18 17 chrUextra 8464704 8465481 -20539175 + SAR_DM Satellite Satellite 341 1118 -354 8 649 288 232 10 10 chrUextra 8465396 8465496 -20539160 - XDMR_DM Unknown Unknown 0 360 261 8 649 675 293 29 6 chrUextra 8465603 8465953 -20538703 + ROVER-I_DM LTR Gypsy 1278 1635 -4949 8 649 550 270 67 0 chrUextra 8465981 8466159 -20538497 + ROVER-I_DM LTR Gypsy 2190 2379 -4205 8 649 266 282 107 89 chrUextra 8466690 8466970 -20537686 - Invader1_LTR LTR Gypsy -55 368 84 8 649 405 150 0 24 chrUextra 8467179 8467261 -20537395 + DMLTR5 LTR Gypsy 44 123 -143 8 649 665 116 0 0 chrUextra 8467380 8467492 -20537164 - ARS406_DM Unknown Unknown -241 112 1 8 649 3271 177 11 11 chrUextra 8467399 8468163 -20536493 + SAR_DM Satellite Satellite 195 958 -514 8 649 3142 0 0 0 chrUextra 8468272 8468633 -20536023 - FW_DM LINE Jockey -4331 361 1 8 649 3357 16 0 0 chrUextra 8468639 8469064 -20535592 - Invader2_I LTR Gypsy -1803 2789 2365 8 649 3272 187 9 9 chrUextra 8469164 8469943 -20534713 - SAR_DM Satellite Satellite -470 1002 224 8 649 435 120 0 0 chrUextra 8469881 8469956 -20534700 + ARS406_DM Unknown Unknown 1 75 -278 8 649 4080 21 59 0 chrUextra 8470056 8470848 -20533808 - R1_DM LINE R1 -1600 3756 2918 8 649 3128 182 19 13 chrUextra 8470948 8471720 -20532936 - SAR_DM Satellite Satellite -501 971 195 8 649 518 129 10 10 chrUextra 8471638 8471740 -20532916 + ARS406_DM Unknown Unknown 13 114 -239 8 649 5183 46 54 24 chrUextra 8471840 8472593 -20532063 - BATUMI_I LTR Pao -6234 1729 954 8 649 29 28 0 0 chrUextra 8472596 8472632 -20532024 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 246 150 0 0 chrUextra 8472929 8472969 -20531687 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 255 125 0 0 chrUextra 8473012 8473052 -20531604 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 886 0 0 27 chrUextra 8473127 8473239 -20531417 + NTS_DM Other Other 25 133 -107 8 649 1252 18 0 6 chrUextra 8473239 8473404 -20531252 + NTS_DM Other Other 38 201 -39 8 649 516 15 0 44 chrUextra 8473456 8473524 -20531132 + NTS_DM Other Other 25 89 -151 8 649 28 48 0 0 chrUextra 8473630 8473672 -20530984 + AT_rich Low_complexity Low_complexity 1 42 0 8 649 488 119 36 0 chrUextra 8473945 8474029 -20530627 - NTS_DM Other Other -150 90 4 8 649 1283 12 0 18 chrUextra 8474139 8474304 -20530352 - NTS_DM Other Other -78 162 1 8 649 736 9 36 27 chrUextra 8474304 8474416 -20530240 - NTS_DM Other Other 0 240 128 8 649 6451 23 0 1 chrUextra 8474516 8475308 -20529348 + ROO_I LTR Pao 943 1733 -6523 8 649 3067 210 53 8 chrUextra 8475410 8476197 -20528459 + TAHRE LINE telomeric 603 1425 -9038 8 649 5880 24 37 14 chrUextra 8476302 8477092 -20527564 + ROO_I LTR Pao 3344 4151 -4105 8 649 3711 2 0 2 chrUextra 8477515 8477944 -20526712 - ROO_LTR LTR Pao 0 428 1 8 649 323 0 25 0 chrUextra 8477944 8477984 -20526672 - ROO_I LTR Pao 0 8256 8216 8 649 5713 48 35 1 chrUextra 8478084 8478876 -20525780 + R1_DM LINE R1 470 1288 -4068 8 649 836 19 9 0 chrUextra 8478976 8479082 -20525574 - DM297_I LTR Gypsy -6060 107 1 8 649 3368 5 7 7 chrUextra 8479082 8479496 -20525160 - DM297_LTR LTR Gypsy 0 414 1 8 649 6726 15 0 0 chrUextra 8479868 8480656 -20524000 + MAX_I LTR Pao 3237 4024 -3890 8 649 6628 2 2 0 chrUextra 8480760 8481552 -20523104 - ROO_I LTR Pao -118 8138 7345 8 649 5381 16 0 0 chrUextra 8481652 8482288 -20522368 + LSU-rRNA_Dme rRNA rRNA 1946 2581 -1319 8 649 1148 15 0 0 chrUextra 8482309 8482444 -20522212 + R2_DM LINE R2 3 137 -3470 8 649 2158 40 0 0 chrUextra 8482544 8482816 -20521840 - PROTOP_A DNA P -833 272 1 8 649 699 118 96 58 chrUextra 8482816 8482971 -20521685 + TART LINE telomeric 3884 4029 -10448 8 649 310 49 0 0 chrUextra 8483035 8483076 -20521580 + TART_B1 LINE telomeric 6297 6337 -4317 8 649 2091 41 11 0 chrUextra 8483067 8483336 -20521320 + TART LINE telomeric 2045 2316 -12161 8 649 2931 186 56 17 chrUextra 8483437 8484228 -20520428 - SAR_DM Satellite Satellite -610 822 1 8 649 6523 19 4 0 chrUextra 8484328 8485120 -20519536 + R1_DM LINE R1 1714 2508 -2848 8 649 1620 2 45 30 chrUextra 8485455 8485859 -20518797 + (CAAGA)n Simple_repeat Simple_repeat 1 409 0 8 649 3328 8 0 0 chrUextra 8486112 8486501 -20518155 - LSU-rRNA_Dme rRNA rRNA -872 3028 2640 8 649 3363 20 0 0 chrUextra 8486499 8486904 -20517752 - R1_DM LINE R1 0 5356 4952 8 649 5787 23 8 13 chrUextra 8487004 8487795 -20516861 + STALKER4_I LTR Gypsy 5711 6497 -33 8 649 2369 173 8 6 chrUextra 8487896 8488687 -20515969 - SAR_DM Satellite Satellite -667 791 1 8 649 23 68 0 0 chrUextra 8489255 8489299 -20515357 + AT_rich Low_complexity Low_complexity 1 44 0 8 649 3442 181 9 9 chrUextra 8489685 8490472 -20514184 - SAR_DM Satellite Satellite -425 1047 261 8 649 1158 120 0 0 chrUextra 8490572 8490790 -20513866 + (TA)n Simple_repeat Simple_repeat 1 218 0 8 649 956 146 33 102 chrUextra 8490790 8491034 -20513622 - DMLTR5 LTR Gypsy 0 266 40 8 649 793 135 0 0 chrUextra 8491122 8491248 -20513408 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 8 649 6029 33 4 1 chrUextra 8491464 8492256 -20512400 + STALKER4_I LTR Gypsy 2541 3334 -3196 8 649 4748 128 9 5 chrUextra 8492356 8493148 -20511508 + HETA LINE telomeric 2541 3335 -2746 8 649 1103 28 7 0 chrUextra 8493248 8493390 -20511266 - FW_DM LINE Jockey -1950 2742 2600 8 649 3614 18 2 2 chrUextra 8493389 8493833 -20510823 - FW_DM LINE Jockey -2499 2193 1750 8 649 1215 48 117 41 chrUextra 8493842 8494039 -20510617 + ROO_I LTR Pao 4193 4404 -3852 8 649 28 48 0 0 chrUextra 8494692 8494734 -20509922 + AT_rich Low_complexity Low_complexity 1 42 0 8 649 6313 26 0 0 chrUextra 8495032 8495824 -20508832 - MDG1_I LTR Gypsy -1414 5182 4391 8 649 1743 10 0 19 chrUextra 8495924 8496137 -20508519 + ACCORD2_LTR LTR Gypsy 7 215 0 8 649 4565 14 21 24 chrUextra 8496137 8496716 -20507940 + ACCORD2_I LTR Gypsy 1 577 -6635 8 649 1179 28 0 0 chrUextra 8497044 8497187 -20507469 + (CAATA)n Simple_repeat Simple_repeat 5 147 0 8 649 5762 5 11 3 chrUextra 8497708 8498451 -20506205 + STALKER4_I LTR Gypsy 5782 6530 0 8 649 407 20 0 0 chrUextra 8498451 8498500 -20506156 + STALKER4_LTR LTR Gypsy 1 49 -353 8 649 6917 2 0 0 chrUextra 8498600 8499392 -20505264 - DIVER_I LTR Pao -3570 2073 1282 8 649 4357 4 0 2 chrUextra 8499492 8500000 -20504656 + LSU-rRNA_Dme rRNA rRNA 2084 2590 -1310 8 649 562 0 0 0 chrUextra 8500000 8500064 -20504592 + LSU-rRNA_Dme rRNA rRNA 2591 2654 -1246 8 649 1869 18 0 0 chrUextra 8500060 8500284 -20504372 + R1_DM LINE R1 3279 3502 -1854 8 649 1093 23 0 0 chrUextra 8500596 8500727 -20503929 + DMRT1B LINE R1 1 131 -5052 8 649 4660 9 2 0 chrUextra 8501276 8501837 -20502819 - STALKER4_I LTR Gypsy -1376 5154 4593 8 649 1656 13 198 0 chrUextra 8501841 8502068 -20502588 - STALKER4_I LTR Gypsy -2522 4008 3737 8 649 24 0 0 0 chrUextra 8502168 8502192 -20502464 + AT_rich Low_complexity Low_complexity 1 24 0 8 649 3053 58 1 14 chrUextra 8502280 8502711 -20501945 - STALKER4_LTR LTR Gypsy -3 399 9 8 649 1610 30 21 0 chrUextra 8502721 8502956 -20501700 - STALKER4_I LTR Gypsy 0 6530 6291 8 649 3476 247 24 19 chrUextra 8503066 8504744 -20499912 - SAR_DM Satellite Satellite -216 1687 1 8 649 6424 34 0 1 chrUextra 8505736 8506528 -20498128 + R1_DM LINE R1 1391 2181 -3175 8 649 6273 28 0 11 chrUextra 8506628 8507418 -20497238 - R1_DM LINE R1 -2154 3202 2422 8 649 2268 172 26 8 chrUextra 8507520 8508301 -20496355 - SAR_DM Satellite Satellite -535 795 1 8 649 22 0 0 0 chrUextra 8509613 8509635 -20495021 + AT_rich Low_complexity Low_complexity 1 22 0 8 649 2275 113 5 24 chrUextra 8510197 8510988 -20493668 - DMSAT6 Satellite Satellite -251 775 1 8 649 201 277 0 0 chrUextra 8511094 8511159 -20493497 + (CTATT)n Simple_repeat Simple_repeat 2 66 0 8 649 540 214 0 0 chrUextra 8511159 8511337 -20493319 + (TTATG)n Simple_repeat Simple_repeat 2 179 0 8 649 566 115 106 29 chrUextra 8511376 8511546 -20493110 + NTS_DM Other Other 58 240 0 8 649 285 104 21 0 chrUextra 8511546 8511594 -20493062 + NTS_DM Other Other 1 49 -191 8 649 1072 124 0 5 chrUextra 8511676 8511870 -20492786 + NTS_DM Other Other 1 193 -47 8 649 1843 182 33 161 chrUextra 8511979 8512760 -20491896 + TART LINE telomeric 8113 8793 -5684 8 649 3149 180 22 22 chrUextra 8512879 8513661 -20490995 - SAR_DM Satellite Satellite -301 1171 390 8 649 6742 2 13 0 chrUextra 8513761 8514552 -20490104 - DMRT1B LINE R1 -1686 3497 2697 8 649 2880 109 121 28 chrUextra 8514653 8515190 -20489466 - TART LINE telomeric -7157 7320 6734 8 649 359 265 31 52 chrUextra 8515252 8515443 -20489213 - TART LINE telomeric -1492 12985 12799 8 649 2689 173 13 15 chrUextra 8515571 8516334 -20488322 + Gypsy2_I LTR Gypsy 1713 2747 -4265 8 649 3312 0 0 0 chrUextra 8516434 8516812 -20487844 + R2_DM LINE R2 3224 3601 -6 8 649 455 36 0 0 chrUextra 8516808 8516863 -20487793 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 8 649 3115 0 6 0 chrUextra 8516863 8517225 -20487431 + R1_DM LINE R1 1 364 -4992 8 649 6837 0 0 0 chrUextra 8517325 8518116 -20486540 - DOC LINE Jockey -3710 1015 225 8 649 1249 49 5 42 chrUextra 8518216 8518408 -20486248 + G5A_DM LINE Jockey 2657 2841 0 8 649 1404 108 0 9 chrUextra 8518440 8518655 -20486001 - BS2 LINE Jockey -4259 462 250 8 649 367 265 20 0 chrUextra 8518666 8518768 -20485888 - GTWIN_I LTR Gypsy -4772 1649 1546 8 649 751 160 53 0 chrUextra 8518857 8519007 -20485649 - GTWIN_I LTR Gypsy -5149 1272 1115 8 649 733 60 0 41 chrUextra 8519107 8519229 -20485427 - DMCR1A LINE CR1 -4353 117 1 8 649 1843 98 74 3 chrUextra 8519230 8519528 -20485128 - MDG1_LTR LTR Gypsy -30 412 94 8 649 372 88 0 0 chrUextra 8519530 8519587 -20485069 + (TTA)n Simple_repeat Simple_repeat 3 59 0 8 81 849 86 56 21 chrUextra 8519615 8519758 -20484898 + DM176_I LTR Gypsy 2360 2507 -3913 8 650 729 128 45 0 chrUextra 8519765 8519898 -20484758 + DM176_I LTR Gypsy 2641 2779 -3641 8 650 998 114 6 6 chrUextra 8519998 8520166 -20484490 + MDG1_LTR LTR Gypsy 245 412 -30 8 650 2614 30 30 102 chrUextra 8520167 8520606 -20484050 + DMCR1A LINE CR1 1 407 -4063 8 650 1111 29 0 0 chrUextra 8520604 8520741 -20483915 + DMCR1A LINE CR1 800 936 -3534 8 650 2389 116 12 9 chrUextra 8520899 8521680 -20482976 + DMSAT6 Satellite Satellite 1 783 -18 8 650 6576 19 0 0 chrUextra 8521780 8522571 -20482085 - DMRT1B LINE R1 -2840 2343 1553 8 650 1211 35 0 0 chrUextra 8522671 8522816 -20481840 + PROTOP DNA P 4336 4480 0 8 650 28 71 0 0 chrUextra 8523170 8523226 -20481430 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 23 68 0 0 chrUextra 8523272 8523316 -20481340 + AT_rich Low_complexity Low_complexity 1 44 0 8 650 21 89 0 0 chrUextra 8523354 8523410 -20481246 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 3186 177 19 25 chrUextra 8524454 8525242 -20479414 + SAR_DM Satellite Satellite 399 1181 -291 8 650 3311 182 16 14 chrUextra 8525344 8526134 -20478522 + SAR_DM Satellite Satellite 256 1047 -425 8 650 3365 15 2 0 chrUextra 8526235 8526639 -20478017 - PROTOP_A DNA P -700 405 1 8 650 228 100 0 0 chrUextra 8526746 8526786 -20477870 + (A)n Simple_repeat Simple_repeat 1 40 0 8 650 6937 1 0 0 chrUextra 8527126 8527917 -20476739 - SSU-rRNA_Dme rRNA rRNA -914 1081 291 8 650 47 0 0 0 chrUextra 8528662 8528709 -20475947 + AT_rich Low_complexity Low_complexity 1 47 0 8 650 1949 0 0 0 chrUextra 8528908 8529134 -20475522 + BARI_DM DNA Tc1 1502 1727 -1 8 650 4893 0 0 0 chrUextra 8529134 8529699 -20474957 + BARI_DM DNA Tc1 4 568 -1160 8 650 3284 184 10 10 chrUextra 8529799 8530581 -20474075 - SAR_DM Satellite Satellite -467 1005 224 8 650 394 127 0 0 chrUextra 8530519 8530590 -20474066 + ARS406_DM Unknown Unknown 1 71 -282 8 650 6656 6 0 0 chrUextra 8530690 8531481 -20473175 - MDG3_I LTR Gypsy -1053 3933 3143 8 650 531 197 29 14 chrUextra 8531584 8531723 -20472933 + HETRP_DM Satellite Satellite 1529 1669 -203 8 650 665 186 7 14 chrUextra 8531888 8532030 -20472626 + HETRP_DM Satellite Satellite 1529 1669 -203 8 650 646 217 0 44 chrUextra 8532146 8532305 -20472351 + HETRP_DM Satellite Satellite 1518 1669 -203 8 650 357 296 22 22 chrUextra 8532588 8532771 -20471885 - DM297_I LTR Gypsy -3176 2991 2809 8 650 384 39 0 0 chrUextra 8532735 8532787 -20471869 - TLD2 Unknown Unknown 0 218 167 8 650 656 278 30 34 chrUextra 8532786 8533222 -20471434 - Gypsy4_I LTR Gypsy -3792 3220 2431 8 650 6858 0 0 0 chrUextra 8533363 8534154 -20470502 + DMRT1B LINE R1 2750 3540 -1643 8 650 3333 180 10 11 chrUextra 8534254 8535042 -20469614 - SAR_DM Satellite Satellite -489 983 197 8 650 3380 180 11 10 chrUextra 8535151 8535936 -20468720 - SAR_DM Satellite Satellite -425 1047 262 8 650 2387 100 42 22 chrUextra 8536036 8536816 -20467840 + DMSAT6 Satellite Satellite 1 796 -89 8 650 1846 78 0 0 chrUextra 8536927 8537182 -20467474 - PROTOP DNA P -1610 2870 2616 8 650 860 156 54 22 chrUextra 8537383 8537567 -20467089 - ACCORD2_LTR LTR Gypsy 0 215 26 8 650 575 49 286 5 chrUextra 8537568 8537714 -20466942 - ACCORD2_I LTR Gypsy -6963 249 58 8 650 5852 50 4 14 chrUextra 8537818 8538609 -20466047 + R1_DM LINE R1 124 906 -4450 8 650 369 0 0 0 chrUextra 8538711 8538757 -20465899 - Copia_LTR LTR Copia -230 46 1 8 650 4132 0 4 0 chrUextra 8538757 8539237 -20465419 - Copia_I LTR Copia 0 4593 4112 8 650 2221 0 0 0 chrUextra 8539239 8539500 -20465156 - Copia_I LTR Copia -638 3955 3695 8 650 27 29 0 0 chrUextra 8539846 8539880 -20464776 + AT_rich Low_complexity Low_complexity 1 34 0 8 650 21 57 0 0 chrUextra 8540550 8540585 -20464071 + AT_rich Low_complexity Low_complexity 1 35 0 8 650 1252 18 0 6 chrUextra 8540585 8540750 -20463906 - NTS_DM Other Other -39 201 38 8 650 870 9 0 27 chrUextra 8540750 8540862 -20463794 - NTS_DM Other Other -107 133 25 8 650 1252 18 0 6 chrUextra 8540914 8541079 -20463577 - NTS_DM Other Other -39 201 38 8 650 870 9 0 27 chrUextra 8541079 8541191 -20463465 - NTS_DM Other Other -107 133 25 8 650 271 0 0 26 chrUextra 8541243 8541281 -20463375 - NTS_DM Other Other -39 201 165 8 650 577 164 69 28 chrUextra 8541382 8541526 -20463130 + ROVER-I_DM LTR Gypsy 6435 6584 0 8 650 1734 120 44 36 chrUextra 8541526 8541890 -20462766 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 650 370 177 13 0 chrUextra 8541890 8541969 -20462687 + ROVER-I_DM LTR Gypsy 1 80 -6504 8 650 183 80 0 0 chrUextra 8542011 8542036 -20462620 + (A)n Simple_repeat Simple_repeat 1 25 0 8 650 629 104 9 19 chrUextra 8542065 8542173 -20462483 + ROVER-I_DM LTR Gypsy 131 237 -6347 8 650 2774 213 33 12 chrUextra 8542273 8543064 -20461592 - SAR_DM Satellite Satellite -539 807 1 8 650 1771 26 8 45 chrUextra 8544055 8544297 -20460359 - Gypsy4_LTR LTR Gypsy -54 233 1 8 650 1273 111 71 158 chrUextra 8544406 8544728 -20459928 + HOBO DNA hAT 23 316 -2700 8 650 526 156 45 9 chrUextra 8544729 8544839 -20459817 + PROTOP_B DNA P 17 130 -1023 8 650 363 33 180 0 chrUextra 8544956 8545017 -20459639 + I_DM LINE I 5396 5467 -764 8 650 704 104 244 23 chrUextra 8545025 8545232 -20459424 - PROTOP DNA P -3808 672 418 8 650 1884 48 196 0 chrUextra 8545237 8545733 -20458923 - DOC3_DM LINE Jockey 0 4740 4148 8 650 2513 77 23 9 chrUextra 8545843 8546620 -20458036 + DMSAT6 Satellite Satellite 1 788 -18 8 650 6658 2 11 0 chrUextra 8546728 8547519 -20457137 + DM176_I LTR Gypsy 5005 5804 -616 8 650 2148 202 16 50 chrUextra 8547761 8548324 -20456332 - Gypsy12_LTR LTR Gypsy -1792 544 1 8 650 646 47 0 0 chrUextra 8548323 8548408 -20456248 - Gypsy12_I LTR Gypsy 0 5546 5462 8 650 829 0 10 0 chrUextra 8548510 8548609 -20456047 - DM1731_I LTR Copia -3876 100 1 8 650 2717 33 0 0 chrUextra 8548609 8548945 -20455711 - DM1731_LTR LTR Copia 0 336 1 8 650 21 0 0 0 chrUextra 8548960 8548981 -20455675 + AT_rich Low_complexity Low_complexity 1 21 0 8 650 291 83 0 59 chrUextra 8548983 8549034 -20455622 - PROTOP DNA P -4421 59 12 8 650 3118 188 10 26 chrUextra 8549401 8550192 -20454464 - SAR_DM Satellite Satellite -258 1214 437 8 650 3362 3 0 0 chrUextra 8550292 8550680 -20453976 + LSU-rRNA_Dme rRNA rRNA 2194 2581 -1319 8 650 3427 7 0 2 chrUextra 8550678 8551083 -20453573 + R2_DM LINE R2 2558 2961 -646 8 650 6113 23 34 0 chrUextra 8551183 8551972 -20452684 - ROO_I LTR Pao -3011 5245 4430 8 650 283 50 0 0 chrUextra 8552074 8552114 -20452542 + ARS406_DM Unknown Unknown 119 158 -195 8 650 2920 192 11 8 chrUextra 8552121 8552831 -20451825 - SAR_DM Satellite Satellite -569 903 192 8 650 690 132 8 0 chrUextra 8552735 8552864 -20451792 + ARS406_DM Unknown Unknown 1 130 -223 8 650 6213 24 1 0 chrUextra 8552965 8553756 -20450900 - MDG1_I LTR Gypsy -358 6238 5447 8 650 3125 186 14 24 chrUextra 8553856 8554645 -20450011 - SAR_DM Satellite Satellite -264 1208 428 8 650 2590 164 8 38 chrUextra 8554747 8554793 -20449863 + SAR_DM Satellite Satellite 1 52 -1253 8 650 850 60 0 0 chrUextra 8554793 8554910 -20449746 - ARS406_DM Unknown Unknown -164 189 73 8 650 2590 164 8 38 chrUextra 8554910 8555537 -20449119 + SAR_DM Satellite Satellite 53 766 -539 8 650 901 30 14 56 chrUextra 8555640 8555783 -20448873 + BATUMI_LTR LTR Pao 136 272 0 8 650 4298 43 19 20 chrUextra 8555783 8556426 -20448230 + BATUMI_I LTR Pao 1 642 -7321 8 650 6608 13 19 0 chrUextra 8556527 8557316 -20447340 - Invader1_I LTR Gypsy -727 2459 1656 8 650 6585 14 0 0 chrUextra 8557417 8558207 -20446449 - FW_DM LINE Jockey -2878 1814 1025 8 650 5771 21 81 34 chrUextra 8558307 8559097 -20445559 - CIRCE LINE Composite -5496 860 34 8 650 2972 193 24 23 chrUextra 8559198 8559987 -20444669 + SAR_DM Satellite Satellite 425 1214 -258 8 650 3208 180 20 17 chrUextra 8560089 8560853 -20443803 + SAR_DM Satellite Satellite 346 1111 -361 8 650 280 190 0 23 chrUextra 8560776 8560862 -20443794 - XDMR_DM Unknown Unknown 0 360 277 8 650 6663 6 1 8 chrUextra 8560977 8561767 -20442889 + STALKER4_I LTR Gypsy 3813 4597 -1933 8 650 6330 25 4 8 chrUextra 8561867 8562657 -20441999 + R1_DM LINE R1 2607 3393 -1963 8 650 6421 22 6 5 chrUextra 8562757 8563547 -20441109 - FW_DM LINE Jockey -328 4364 3574 8 650 3687 7 0 0 chrUextra 8563647 8564087 -20440569 - DMRT1B LINE R1 -4372 811 372 8 650 1691 114 25 0 chrUextra 8564112 8564437 -20440219 - TART_B1 LINE telomeric -8410 2244 1912 8 650 522 211 14 37 chrUextra 8565147 8565323 -20439333 - TART_B1 LINE telomeric -10122 532 381 8 650 2649 198 66 25 chrUextra 8565442 8566213 -20438443 - TAHRE LINE telomeric -548 9915 9113 8 650 21 89 0 0 chrUextra 8566506 8566562 -20438094 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 30 77 0 0 chrUextra 8566687 8566752 -20437904 + AT_rich Low_complexity Low_complexity 1 65 0 8 650 3462 1 47 0 chrUextra 8567207 8567997 -20436659 + Copia_I LTR Copia 1536 2362 -2231 8 650 579 223 20 20 chrUextra 8568149 8568313 -20436343 + Gypsy6_I LTR Gypsy 5178 5318 -1694 8 650 6967 0 0 0 chrUextra 8568987 8569777 -20434879 - Gypsy6_I LTR Gypsy -962 6050 5261 8 650 5999 28 57 4 chrUextra 8570770 8571547 -20433109 - CIRCE LINE Composite -2777 3579 2762 8 650 1190 184 47 82 chrUextra 8571657 8572142 -20432514 - TAHRE LINE telomeric -2207 8256 7789 8 650 231 128 0 0 chrUextra 8572115 8572154 -20432502 - HETA LINE telomeric -1495 4586 4548 8 650 743 196 53 105 chrUextra 8572162 8572447 -20432209 - TAHRE LINE telomeric -2981 7482 7213 8 650 6530 10 30 0 chrUextra 8572547 8573337 -20431319 + DOC2_DM LINE Jockey 2095 2908 -1885 8 650 3266 174 9 9 chrUextra 8573447 8574193 -20430463 - SAR_DM Satellite Satellite -535 937 192 8 650 863 85 0 0 chrUextra 8574097 8574227 -20430429 + ARS406_DM Unknown Unknown 1 130 -223 8 650 1158 122 0 0 chrUextra 8574327 8574541 -20430115 + (TA)n Simple_repeat Simple_repeat 1 214 0 8 650 2316 8 0 0 chrUextra 8574541 8574807 -20429849 - DMLTR5 LTR Gypsy 0 266 1 8 650 2664 0 0 0 chrUextra 8574807 8575117 -20429539 - HMSBEAGLE_I LTR Gypsy 0 6529 6220 8 650 999 75 0 0 chrUextra 8575222 8575368 -20429288 - ARS406_DM Unknown Unknown -164 189 44 8 650 2493 187 22 18 chrUextra 8575368 8576007 -20428649 + SAR_DM Satellite Satellite 1 642 -354 8 650 3074 191 14 20 chrUextra 8576107 8576893 -20427763 - SAR_DM Satellite Satellite -549 781 1 8 650 4030 34 0 0 chrUextra 8576997 8577504 -20427152 + PROTOP_A DNA P 599 1105 0 8 650 2185 46 18 0 chrUextra 8577504 8577787 -20426869 - DMCR1A LINE CR1 -860 3610 3323 8 650 3369 25 107 1 chrUextra 8577889 8578677 -20425979 + MAX_I LTR Pao 3126 3996 -3918 8 650 569 14 0 0 chrUextra 8578777 8578847 -20425809 + STALKER4_I LTR Gypsy 6461 6530 0 8 650 3328 8 10 2 chrUextra 8578847 8579246 -20425410 + STALKER4_LTR LTR Gypsy 1 402 0 8 650 2383 20 3 3 chrUextra 8579273 8579567 -20425089 - MAX_I LTR Pao -824 7090 6797 8 650 6421 23 1 0 chrUextra 8579667 8580457 -20424199 + ROO_I LTR Pao 1181 1971 -6285 8 650 6449 27 0 0 chrUextra 8581447 8582237 -20422419 + ROO_I LTR Pao 6775 7564 -692 8 650 6439 20 2 8 chrUextra 8582337 8583127 -20421529 + R1_DM LINE R1 4178 4963 -393 8 650 899 0 0 0 chrUextra 8583227 8583331 -20421325 + 5S_DM RNA RNA 32 135 0 8 650 1104 0 0 56 chrUextra 8583572 8583715 -20420941 + 5S_DM RNA RNA 1 135 0 8 650 549 0 0 0 chrUextra 8583953 8584017 -20420639 + 5S_DM RNA RNA 1 64 -71 8 650 3294 176 17 9 chrUextra 8584139 8584907 -20419749 - SAR_DM Satellite Satellite -396 1076 303 8 650 376 78 0 0 chrUextra 8585007 8585058 -20419598 + Gypsy6A_LTR LTR Gypsy 252 302 -118 8 650 34 24 0 0 chrUextra 8585285 8585326 -20419330 + AT_rich Low_complexity Low_complexity 1 41 0 8 650 6368 29 1 0 chrUextra 8585897 8586687 -20417969 - R1_DM LINE R1 -1740 3616 2826 8 650 5203 94 10 14 chrUextra 8586787 8587575 -20417081 + Gypsy12_I LTR Gypsy 1180 1964 -3582 8 650 3390 170 9 14 chrUextra 8587677 8588458 -20416198 - SAR_DM Satellite Satellite -501 971 195 8 650 23 33 0 0 chrUextra 8588852 8588882 -20415774 + AT_rich Low_complexity Low_complexity 1 30 0 8 650 507 173 15 8 chrUextra 8589076 8589210 -20415446 + PROTOP_B DNA P 314 448 -705 8 650 328 87 0 0 chrUextra 8589249 8589295 -20415361 - DNAREP1_DM LINE Penelope -199 395 350 8 650 1361 18 0 6 chrUextra 8589457 8589624 -20415032 + MICROPIA_LTR LTR Gypsy 311 476 0 8 650 3609 9 5 0 chrUextra 8589632 8590053 -20414603 + Invader1_LTR LTR Gypsy 1 423 0 8 650 1469 0 0 0 chrUextra 8590053 8590223 -20414433 + Copia2_LTR_DM LTR Copia 29 198 0 8 650 1681 291 47 12 chrUextra 8590357 8591129 -20413527 + MICROPIA_I LTR Gypsy 2417 3215 -1261 8 650 369 109 0 0 chrUextra 8591237 8591292 -20413364 + (TA)n Simple_repeat Simple_repeat 2 56 0 8 650 270 271 74 0 chrUextra 8591470 8591592 -20413064 + Invader6_I LTR Gypsy 1003 1133 -3343 8 650 935 307 14 17 chrUextra 8591575 8592006 -20412650 + Invader6_I LTR Gypsy 1682 2122 -1977 8 650 26 30 0 0 chrUextra 8592547 8592580 -20412076 + AT_rich Low_complexity Low_complexity 1 33 0 8 650 6311 30 10 0 chrUextra 8593017 8593807 -20410849 - R1_DM LINE R1 -72 5284 4487 8 650 921 125 0 6 chrUextra 8593913 8594090 -20410566 + DM297_I LTR Gypsy 4559 4734 -1433 8 650 1019 146 0 5 chrUextra 8594088 8594281 -20410375 + DM297_I LTR Gypsy 5490 5681 -486 8 650 766 140 0 53 chrUextra 8594280 8594431 -20410225 + DM176_I LTR Gypsy 6278 6420 0 8 650 6346 24 14 1 chrUextra 8594799 8595587 -20409069 - R1_DM LINE R1 -1027 4329 3532 8 650 6742 1 1 4 chrUextra 8595687 8596475 -20408181 + LSU-rRNA_Dme rRNA rRNA 760 1545 -2355 8 650 3366 183 8 9 chrUextra 8596577 8597361 -20407295 - SAR_DM Satellite Satellite -444 1028 246 8 650 272 109 0 0 chrUextra 8597321 8597367 -20407289 + ARS406_DM Unknown Unknown 1 46 -307 8 650 3121 184 27 14 chrUextra 8597467 8598252 -20406404 - SAR_DM Satellite Satellite -454 1018 224 8 650 5510 29 10 51 chrUextra 8598357 8599147 -20405509 - BATUMI_I LTR Pao -4796 3167 2410 8 650 3270 185 11 18 chrUextra 8599248 8600036 -20404620 + SAR_DM Satellite Satellite 377 1159 -313 8 650 6794 5 0 0 chrUextra 8600137 8600927 -20403729 - PROTOP DNA P -1111 3369 2580 8 650 1241 122 38 61 chrUextra 8601027 8601288 -20403368 + R1_DM LINE R1 451 705 -4651 8 650 3636 102 2 2 chrUextra 8601288 8601817 -20402839 + R1_DM LINE R1 1099 1627 -3729 8 650 5243 57 31 4 chrUextra 8601918 8602693 -20401963 + TART LINE telomeric 2290 3085 -11392 8 650 6213 23 23 1 chrUextra 8602807 8603597 -20401059 - STALKER4_I LTR Gypsy -3371 3159 2353 8 650 6401 27 4 0 chrUextra 8603698 8604487 -20400169 - R1_DM LINE R1 -1853 3503 2712 8 650 1900 69 81 0 chrUextra 8604587 8604909 -20399747 - PROTOP DNA P -3723 757 421 8 650 3131 66 49 2 chrUextra 8604909 8605377 -20399279 - PROTOP_A DNA P 0 1105 616 8 650 1328 39 0 4 chrUextra 8605477 8605708 -20398948 + (ATCG)n Simple_repeat Simple_repeat 1 230 0 8 650 221 104 21 0 chrUextra 8605708 8605725 -20398931 + (CGAT)n Simple_repeat Simple_repeat 3 19 0 8 650 1171 62 0 11 chrUextra 8605725 8605905 -20398751 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 8 650 221 104 21 0 chrUextra 8605905 8605935 -20398721 + (CGAT)n Simple_repeat Simple_repeat 4 33 0 8 650 1185 73 0 0 chrUextra 8605935 8606267 -20398389 + (TCTA)n Simple_repeat Simple_repeat 1 332 0 8 650 256 98 0 0 chrUextra 8606367 8606408 -20398248 - PROTOP DNA P -4222 258 218 8 650 209 125 0 24 chrUextra 8606729 8606791 -20397865 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 8 650 3040 6 6 0 chrUextra 8606791 8607157 -20397499 + QUASIMODO_LTR LTR Gypsy 1 368 -290 8 650 3051 190 21 20 chrUextra 8607257 8608047 -20396609 + SAR_DM Satellite Satellite 419 1209 -263 8 650 3254 205 10 11 chrUextra 8609037 8609827 -20394829 - DM412 LTR Gypsy -2058 4839 4051 8 650 6396 25 6 0 chrUextra 8609928 8610717 -20393939 + R1_DM LINE R1 1431 2224 -3132 8 650 3240 177 16 18 chrUextra 8610818 8611605 -20393051 + SAR_DM Satellite Satellite 334 1119 -353 8 650 254 286 0 0 chrUextra 8611758 8611828 -20392828 - Gypsy2_I LTR Gypsy -91 6044 5975 8 650 393 211 0 0 chrUextra 8611837 8611913 -20392743 - Gypsy3_I LTR Gypsy -172 6005 5930 8 650 2931 242 7 3 chrUextra 8611879 8612497 -20392159 - Gypsy2_I LTR Gypsy -174 5961 5342 8 650 6912 19 10 1 chrUextra 8612597 8613387 -20391269 - R1_DM LINE R1 -2922 2434 1638 8 650 5133 82 20 9 chrUextra 8613491 8614277 -20390379 + R1_DM LINE R1 3456 4043 -1313 8 650 2799 170 16 6 chrUextra 8614391 8614955 -20389701 + SAR_DM Satellite Satellite 1 751 -613 8 650 1376 85 0 0 chrUextra 8614955 8615144 -20389512 - ARS406_DM Unknown Unknown -164 189 1 8 650 2799 170 16 6 chrUextra 8615144 8615165 -20389491 + SAR_DM Satellite Satellite 752 781 -583 8 650 7406 1 0 0 chrUextra 8615267 8616057 -20388599 - HOBO DNA hAT -2126 890 101 8 650 6989 13 2 1 chrUextra 8616157 8616947 -20387709 + R1_DM LINE R1 3873 4663 -693 8 650 6539 43 5 1 chrUextra 8617047 8617836 -20386820 + R1_DM LINE R1 1055 1846 -3510 8 650 6086 16 0 7 chrUextra 8617936 8618641 -20386015 + MICROPIA_I LTR Gypsy 3777 4476 0 8 650 753 0 0 0 chrUextra 8618641 8618725 -20385931 + MICROPIA_LTR LTR Gypsy 1 84 -392 8 650 2189 159 88 39 chrUextra 8619115 8619605 -20385051 + DNAREP1_DM LINE Penelope 1 514 -80 8 650 2107 4 0 0 chrUextra 8620603 8620832 -20383824 - STALKER4_LTR LTR Gypsy -173 229 1 8 650 4218 43 7 4 chrUextra 8620832 8621392 -20383264 - STALKER4_I LTR Gypsy 0 6530 5969 8 650 3645 173 11 19 chrUextra 8621493 8622275 -20382381 - SAR_DM Satellite Satellite -371 1101 326 8 650 3743 60 52 2 chrUextra 8622381 8622916 -20381740 + PROTOP DNA P 192 753 -3727 8 650 1194 48 7 7 chrUextra 8622922 8623069 -20381587 + PROTOP DNA P 4334 4480 0 8 650 3225 186 54 14 chrUextra 8623270 8624054 -20380602 - SAR_DM Satellite Satellite -262 1210 396 8 650 5206 34 11 0 chrUextra 8624159 8624773 -20379883 - FW_DM LINE Jockey -4071 621 1 8 650 1422 42 0 0 chrUextra 8624781 8624948 -20379708 + R1_DM LINE R1 1377 1543 -3813 8 650 6847 20 1 1 chrUextra 8625048 8625837 -20378819 + R1_DM LINE R1 3585 4373 -983 8 650 294 91 0 43 chrUextra 8626328 8626374 -20378282 + DNAREP1_DM LINE Penelope 2 45 -549 8 650 967 172 82 36 chrUextra 8626396 8626726 -20377930 + DNAREP1_DM LINE Penelope 89 359 -235 8 650 936 9 0 27 chrUextra 8626836 8626948 -20377708 + NTS_DM Other Other 25 133 -107 8 650 1320 18 0 12 chrUextra 8626948 8627114 -20377542 + NTS_DM Other Other 38 201 -39 8 650 936 9 0 27 chrUextra 8627166 8627278 -20377378 + NTS_DM Other Other 25 133 -107 8 650 1350 18 0 6 chrUextra 8627278 8627443 -20377213 + NTS_DM Other Other 38 201 -39 8 650 936 9 0 27 chrUextra 8627495 8627607 -20377049 + NTS_DM Other Other 25 133 -107 8 650 6891 19 1 1 chrUextra 8627715 8628504 -20376152 - R1_DM LINE R1 -860 4496 3708 8 650 5989 26 0 39 chrUextra 8628604 8629393 -20375263 - DM176_I LTR Gypsy -5465 955 198 8 650 5804 89 37 13 chrUextra 8629493 8630282 -20374374 - Gypsy12_I LTR Gypsy -80 5466 4659 8 650 2038 298 16 25 chrUextra 8630387 8631161 -20373495 - FROGGER_I LTR Copia -805 1272 506 8 650 7319 0 1 0 chrUextra 8631271 8632060 -20372596 - TART LINE telomeric -10663 3814 3025 8 650 2727 84 66 22 chrUextra 8632160 8632931 -20371725 - DMSAT6 Satellite Satellite -91 805 1 8 650 3269 22 0 0 chrUextra 8633049 8633411 -20371245 + Invader6_LTR LTR Gypsy 32 393 0 8 650 3923 9 0 0 chrUextra 8633411 8633838 -20370818 + Invader6_I LTR Gypsy 1 427 -3672 8 650 3394 129 78 37 chrUextra 8633939 8634727 -20369929 + STALKER4_I LTR Gypsy 385 1253 -5277 8 650 5876 71 14 0 chrUextra 8634827 8635616 -20369040 + STALKER4_I LTR Gypsy 2626 3425 -3105 8 650 3410 184 15 41 chrUextra 8635716 8636500 -20368156 + SAR_DM Satellite Satellite 1 763 -205 8 650 6560 41 1 1 chrUextra 8636605 8637394 -20367262 - R1_DM LINE R1 -3841 1515 727 8 650 222 37 0 0 chrUextra 8637881 8637908 -20366748 + (T)n Simple_repeat Simple_repeat 1 27 0 8 650 6849 16 1 2 chrUextra 8638383 8639172 -20365484 + R1_DM LINE R1 3469 4256 -1100 8 650 7176 0 0 0 chrUextra 8639272 8640061 -20364595 - MDG3_I LTR Gypsy -543 4443 3655 8 650 3560 194 13 25 chrUextra 8640161 8640950 -20363706 - SAR_DM Satellite Satellite -542 779 1 8 650 6948 20 0 0 chrUextra 8641050 8641839 -20362817 + ROO_I LTR Pao 1297 2085 -6171 8 650 3219 177 29 19 chrUextra 8641944 8642697 -20361959 - SAR_DM Satellite Satellite -514 958 198 8 650 582 122 51 25 chrUextra 8642610 8642728 -20361928 + ARS406_DM Unknown Unknown 1 121 -232 8 650 1128 131 155 79 chrUextra 8643082 8643505 -20361151 + IDEFIX_LTR LTR Gypsy 1 504 -90 8 650 850 36 0 18 chrUextra 8643505 8643617 -20361039 - CIRCE LINE Composite -1500 4856 4747 8 650 4765 2 0 4 chrUextra 8643717 8644232 -20360424 - R2_DM LINE R2 -27 3580 3068 8 650 2573 7 0 3 chrUextra 8644221 8644506 -20360150 - LSU-rRNA_Dme rRNA rRNA -1321 2579 2296 8 650 6222 47 67 1 chrUextra 8644606 8645395 -20359261 + Baggins1 LINE LOA 4365 5205 -248 8 650 2680 94 13 19 chrUextra 8645495 8646275 -20358381 - DMSAT6 Satellite Satellite -72 774 1 8 650 1350 18 0 6 chrUextra 8646388 8646553 -20358103 + NTS_DM Other Other 38 201 -39 8 650 936 9 0 27 chrUextra 8646605 8646717 -20357939 + NTS_DM Other Other 25 133 -107 8 650 1537 20 20 20 chrUextra 8646717 8646920 -20357736 + NTS_DM Other Other 38 240 0 8 650 1873 21 17 17 chrUextra 8646920 8647160 -20357496 + NTS_DM Other Other 1 240 0 8 650 6795 23 0 1 chrUextra 8647273 8648062 -20356594 + FW_DM LINE Jockey 2640 3427 -1265 8 650 3436 187 32 10 chrUextra 8648162 8648950 -20355706 + SAR_DM Satellite Satellite 387 1191 -281 8 650 994 36 0 0 chrUextra 8649051 8649163 -20355493 + PROTOP DNA P 4369 4480 0 8 650 27 81 0 0 chrUextra 8649511 8649573 -20355083 + AT_rich Low_complexity Low_complexity 1 62 0 8 650 29 47 0 0 chrUextra 8649619 8649662 -20354994 + AT_rich Low_complexity Low_complexity 1 43 0 8 650 21 89 0 0 chrUextra 8649700 8649756 -20354900 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 6148 48 38 2 chrUextra 8649940 8650729 -20353927 + R1_DM LINE R1 598 1414 -3942 8 651 4010 179 13 29 chrUextra 8650845 8651617 -20353039 - HETA LINE telomeric -2431 3650 2891 8 651 6656 28 28 0 chrUextra 8651718 8652507 -20352149 + R1_DM LINE R1 2710 3520 -1836 8 651 3706 121 38 85 chrUextra 8652607 8653396 -20351260 - PROTOP_B DNA P -81 1072 321 8 651 634 179 8 25 chrUextra 8653507 8653627 -20351029 - TAHRE LINE telomeric -687 9776 9659 8 651 1507 193 74 98 chrUextra 8654385 8654964 -20349692 - TART LINE telomeric -6928 7549 6985 8 651 474 67 77 39 chrUextra 8654954 8655032 -20349624 - TART LINE telomeric -3805 10672 10592 8 651 1096 42 14 7 chrUextra 8655030 8655174 -20349482 - TART LINE telomeric -3814 10663 10519 8 651 7196 0 0 2 chrUextra 8655274 8656063 -20348593 - ROO_I LTR Pao -2604 5652 4866 8 651 3517 211 50 21 chrUextra 8656163 8657841 -20346815 - SAR_DM Satellite Satellite -602 1726 1 8 651 22 56 0 0 chrUextra 8657950 8657986 -20346670 + AT_rich Low_complexity Low_complexity 1 36 0 8 651 278 176 0 19 chrUextra 8657999 8658051 -20346605 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 268 196 0 19 chrUextra 8658082 8658134 -20346522 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 268 196 0 19 chrUextra 8658174 8658226 -20346430 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 268 196 0 19 chrUextra 8658266 8658318 -20346338 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 2861 3 0 0 chrUextra 8658419 8658728 -20345928 - LSU-rRNA_Dme rRNA rRNA 0 3900 3592 8 651 3409 192 12 12 chrUextra 8658830 8659608 -20345048 - SAR_DM Satellite Satellite -515 957 180 8 651 4748 2 0 4 chrUextra 8659719 8660238 -20344418 - POGO DNA Pogo -711 1410 894 8 651 2518 0 0 0 chrUextra 8660235 8660508 -20344148 + BEL_I LTR Pao 1322 1594 -3810 8 651 45 0 0 0 chrUextra 8660610 8660655 -20344001 + AT_rich Low_complexity Low_complexity 1 45 0 8 651 3037 210 26 3 chrUextra 8660701 8661394 -20343262 - DM412 LTR Gypsy -324 6573 5865 8 651 387 0 0 0 chrUextra 8661497 8661540 -20343116 + Invader1_LTR LTR Gypsy 381 423 0 8 651 2495 128 124 73 chrUextra 8661576 8662182 -20342474 - HMSBEAGLE_I LTR Gypsy -5891 638 2 8 651 479 198 10 19 chrUextra 8662183 8662286 -20342370 - DMLTR5 LTR Gypsy -4 262 161 8 651 7332 0 1 1 chrUextra 8662386 8663175 -20341481 + MDG3_I LTR Gypsy 650 1438 -3548 8 651 5770 68 34 8 chrUextra 8663275 8664063 -20340593 + QUASIMODO_I LTR Gypsy 578 1386 -4674 8 651 3576 180 11 13 chrUextra 8664169 8664929 -20339727 - SAR_DM Satellite Satellite -535 937 180 8 651 899 92 0 0 chrUextra 8664823 8664953 -20339703 + ARS406_DM Unknown Unknown 1 130 -223 8 651 2575 84 7 36 chrUextra 8665941 8666692 -20337964 - DMSAT6 Satellite Satellite -59 728 1 8 651 508 208 0 65 chrUextra 8667065 8667235 -20337421 - Gypsy8_I LTR Gypsy -4123 224 66 8 651 246 152 13 132 chrUextra 8667342 8667418 -20337238 - Gypsy8_LTR LTR Gypsy -237 67 1 8 651 6404 29 1 0 chrUextra 8667717 8668505 -20336151 - R1_DM LINE R1 -1836 3520 2732 8 651 6236 7 12 0 chrUextra 8668605 8669341 -20335315 + DMRT1B LINE R1 4436 5180 -3 8 651 468 0 0 0 chrUextra 8669341 8669393 -20335263 + (CACAA)n Simple_repeat Simple_repeat 4 55 0 8 651 2281 3 0 0 chrUextra 8669493 8669777 -20334879 + I_DM LINE I 5181 5464 -767 8 651 2705 6 80 8 chrUextra 8669766 8670281 -20334375 - LSU-rRNA_Dme rRNA rRNA -994 2906 2355 8 651 5827 18 6 0 chrUextra 8671269 8671983 -20332673 + PROTOP_A DNA P 388 1105 0 8 651 652 0 0 0 chrUextra 8671983 8672057 -20332599 + CIRCE LINE Composite 2424 2497 -3859 8 651 475 187 0 0 chrUextra 8672157 8672264 -20332392 - STALKER4_I LTR Gypsy -6189 341 235 8 651 31 58 0 0 chrUextra 8672265 8672317 -20332339 + AT_rich Low_complexity Low_complexity 1 52 0 8 651 3155 54 2 14 chrUextra 8672405 8672844 -20331812 - STALKER4_LTR LTR Gypsy -10 392 1 8 651 549 101 10 20 chrUextra 8672844 8672945 -20331711 + DMSAT6 Satellite Satellite 291 390 -80 8 651 6385 27 5 0 chrUextra 8673046 8673833 -20330823 + R1_DM LINE R1 1445 2235 -3121 8 651 1348 6 0 0 chrUextra 8673933 8674106 -20330550 + STALKER4_I LTR Gypsy 6358 6530 0 8 651 3419 2 0 5 chrUextra 8674106 8674510 -20330146 + STALKER4_LTR LTR Gypsy 1 402 0 8 651 1207 284 48 32 chrUextra 8674823 8675580 -20329076 + SAR_DM Satellite Satellite 352 1120 -352 8 651 6290 18 15 4 chrUextra 8675709 8676497 -20328159 - NINJA_I LTR Pao -314 5697 4901 8 651 3251 179 7 8 chrUextra 8676604 8677346 -20327310 - SAR_DM Satellite Satellite -535 937 197 8 651 846 92 0 0 chrUextra 8677255 8677385 -20327271 + ARS406_DM Unknown Unknown 1 130 -223 8 651 1996 8 4 0 chrUextra 8677485 8677733 -20326923 + Copia_LTR LTR Copia 28 276 0 8 651 26 30 0 0 chrUextra 8677742 8677775 -20326881 + AT_rich Low_complexity Low_complexity 1 33 0 8 651 21 57 0 0 chrUextra 8677821 8677856 -20326800 + AT_rich Low_complexity Low_complexity 1 35 0 8 651 21 89 0 0 chrUextra 8677894 8677950 -20326706 + AT_rich Low_complexity Low_complexity 1 56 0 8 651 1582 79 14 45 chrUextra 8678373 8678689 -20325967 - HETA LINE telomeric -5525 556 1 8 651 3259 82 4 4 chrUextra 8678682 8679159 -20325497 - HETA LINE telomeric 0 6081 5605 8 651 2336 159 77 25 chrUextra 8679261 8679810 -20324846 - Stalker2_I LTR Gypsy -6584 818 242 8 651 289 96 0 37 chrUextra 8679984 8680038 -20324618 - Stalker2_I LTR Gypsy -7350 52 1 8 651 1150 49 238 5 chrUextra 8681640 8681825 -20322831 + PROTOP DNA P 1 228 -4252 8 651 5356 21 52 0 chrUextra 8681925 8682713 -20321943 + R1_DM LINE R1 1771 2599 -2757 8 651 3396 173 8 8 chrUextra 8682832 8683583 -20321073 - SAR_DM Satellite Satellite -396 1076 326 8 651 3015 184 19 29 chrUextra 8683701 8684489 -20320167 + SAR_DM Satellite Satellite 436 1215 -257 8 651 3488 167 13 9 chrUextra 8684589 8685358 -20319298 - SAR_DM Satellite Satellite -455 1017 246 8 651 327 103 17 0 chrUextra 8685318 8685376 -20319280 + ARS406_DM Unknown Unknown 1 59 -294 8 651 4067 43 68 32 chrUextra 8685477 8686097 -20318559 - PROTOP_B DNA P -511 642 1 8 651 301 68 0 0 chrUextra 8686221 8686265 -20318391 + PROTOP_B DNA P 1 44 -1109 8 651 575 28 0 0 chrUextra 8686365 8686436 -20318220 + ARS406_DM Unknown Unknown 119 189 -164 8 651 3184 239 57 14 chrUextra 8686373 8688041 -20316615 - SAR_DM Satellite Satellite -242 1738 1 8 651 3070 45 9 16 chrUextra 8688141 8688573 -20316083 - BATUMI_I LTR Pao -1017 6946 6518 8 651 1175 271 15 3 chrUextra 8688584 8688921 -20315735 + TOM_I LTR Gypsy 628 968 -5144 8 651 2556 151 47 19 chrUextra 8689031 8689817 -20314839 - TART_B1 LINE telomeric -8313 2341 1117 8 651 2713 33 0 0 chrUextra 8689917 8690249 -20314407 - CIRCE LINE Composite -597 5759 5428 8 651 2147 85 77 35 chrUextra 8690329 8690705 -20313951 - CIRCE LINE Composite -929 5427 5036 8 651 5466 30 0 0 chrUextra 8690805 8691479 -20313177 - FW_DM LINE Jockey -4010 682 9 8 651 600 147 0 0 chrUextra 8691496 8691591 -20313065 - ROVER-I_DM LTR Gypsy -2795 3789 3695 8 651 1369 18 0 0 chrUextra 8691693 8691859 -20312797 - DMRT1A LINE R1 -627 4556 4391 8 651 5286 8 10 0 chrUextra 8691859 8692481 -20312175 - DMRT1A LINE R1 -2714 2469 1842 8 651 1285 29 105 0 chrUextra 8693197 8693369 -20311287 + PROTOP_B DNA P 1 190 -963 8 651 6739 1 0 0 chrUextra 8693469 8694257 -20310399 - G6_DM LINE Jockey -344 1698 911 8 651 1586 5 0 0 chrUextra 8694357 8694545 -20310111 - MICROPIA_LTR LTR Gypsy -288 188 1 8 651 4554 15 82 7 chrUextra 8694545 8695145 -20309511 - MICROPIA_I LTR Gypsy 0 4476 3832 8 651 5198 15 4 42 chrUextra 8695245 8695952 -20308704 - MDG3_I LTR Gypsy -2688 2298 1619 8 651 559 49 12 0 chrUextra 8695952 8696033 -20308623 - MDG3_I LTR Gypsy -3305 1681 1600 8 651 4012 12 48 0 chrUextra 8696133 8696627 -20308029 - ROO_I LTR Pao -6526 1730 1213 8 651 2461 24 0 0 chrUextra 8696627 8696921 -20307735 + PROTOP_A DNA P 1 294 -811 8 651 3227 176 18 22 chrUextra 8697021 8697809 -20306847 - SAR_DM Satellite Satellite -313 1159 375 8 651 6481 9 22 0 chrUextra 8697909 8698697 -20305959 - DMRT1B LINE R1 -70 5113 4309 8 651 6258 0 2 32 chrUextra 8698797 8699585 -20305071 + LSU-rRNA_Dme rRNA rRNA 120 884 -3016 8 651 6656 19 1 0 chrUextra 8699685 8700469 -20304187 - Gypsy6_I LTR Gypsy -1332 5680 4896 8 651 3204 236 37 24 chrUextra 8700573 8702241 -20302415 - SAR_DM Satellite Satellite -490 1690 1 8 651 2509 41 3 0 chrUextra 8703252 8703568 -20301088 + PROTOP_A DNA P 789 1105 0 8 651 26 30 0 0 chrUextra 8703943 8703976 -20300680 + AT_rich Low_complexity Low_complexity 1 33 0 8 651 1182 36 0 12 chrUextra 8704125 8704293 -20300363 - NTS_DM Other Other -37 203 38 8 651 817 0 0 0 chrUextra 8704293 8704389 -20300267 - NTS_DM Other Other -107 133 38 8 651 832 9 9 27 chrUextra 8704389 8704500 -20300156 - NTS_DM Other Other -107 133 25 8 651 21 57 0 0 chrUextra 8704526 8704561 -20300095 + AT_rich Low_complexity Low_complexity 1 35 0 8 651 1252 18 0 6 chrUextra 8704561 8704726 -20299930 - NTS_DM Other Other -39 201 38 8 651 852 18 0 27 chrUextra 8704726 8704838 -20299818 - NTS_DM Other Other -107 133 25 8 651 21 36 0 0 chrUextra 8704864 8704892 -20299764 + AT_rich Low_complexity Low_complexity 1 28 0 8 651 360 111 0 0 chrUextra 8705013 8705067 -20299589 + (CATA)n Simple_repeat Simple_repeat 3 56 0 8 651 1149 123 0 0 chrUextra 8705069 8705248 -20299408 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 651 3899 6 0 61 chrUextra 8705248 8705754 -20298902 - MICROPIA_LTR LTR Gypsy -1 475 1 8 651 368 0 0 21 chrUextra 8705754 8705801 -20298855 - MICROPIA_I LTR Gypsy 0 4476 4431 8 651 5082 3 0 0 chrUextra 8705901 8706485 -20298171 + LSU-rRNA_Dme rRNA rRNA 1995 2578 -1322 8 651 1737 5 0 0 chrUextra 8706484 8706689 -20297967 + R2_DM LINE R2 605 809 -2798 8 651 3138 181 10 15 chrUextra 8706793 8707577 -20297079 + SAR_DM Satellite Satellite 1 780 -354 8 651 6535 23 0 0 chrUextra 8707677 8708465 -20296191 + R1_DM LINE R1 2001 2788 -2568 8 651 890 18 0 9 chrUextra 8708565 8708675 -20295981 - DM297_LTR LTR Gypsy -304 110 2 8 651 180 0 0 0 chrUextra 8708675 8708695 -20295961 + (TA)n Simple_repeat Simple_repeat 1 20 0 8 651 3150 0 0 0 chrUextra 8708695 8709061 -20295595 + ROVER-LTR_DM LTR Gypsy 2 367 0 8 651 2496 0 0 0 chrUextra 8709061 8709353 -20295303 + ROVER-I_DM LTR Gypsy 1 292 -6292 8 651 3404 205 10 6 chrUextra 8709453 8710240 -20294416 - Stalker2_I LTR Gypsy -2935 4467 3678 8 651 977 309 21 21 chrUextra 8710610 8711126 -20293530 - ACCORD_I LTR Gypsy -2113 4175 3660 8 651 796 82 0 0 chrUextra 8711229 8711351 -20293305 - ARS406_DM Unknown Unknown -231 122 1 8 651 3250 172 13 13 chrUextra 8711245 8712003 -20292653 + SAR_DM Satellite Satellite 180 937 -535 8 651 5870 47 13 1 chrUextra 8712117 8712905 -20291751 - R1_DM LINE R1 -4185 1171 375 8 651 6888 0 1 0 chrUextra 8713006 8713790 -20290866 + LSU-rRNA_Dme rRNA rRNA 2919 3703 -197 8 651 6495 20 1 0 chrUextra 8713895 8714681 -20289975 + R1_DM LINE R1 1504 2290 -3066 8 651 3312 87 13 4 chrUextra 8715686 8716208 -20288448 + CIRCE LINE Composite 4454 4980 -1376 8 651 2709 160 48 19 chrUextra 8716565 8717197 -20287459 + TART LINE telomeric 8941 9590 -4887 8 651 664 178 0 8 chrUextra 8717215 8717345 -20287311 + HETA LINE telomeric 4491 4619 -1462 8 651 4320 2 0 47 chrUextra 8717445 8717998 -20286658 - LSU-rRNA_Dme rRNA rRNA -3373 527 1 8 651 21 95 0 0 chrUextra 8718010 8718073 -20286583 + AT_rich Low_complexity Low_complexity 1 63 0 8 651 767 11 0 0 chrUextra 8718333 8718424 -20286232 + R1_DM LINE R1 4192 4282 -1074 8 651 5163 29 14 3 chrUextra 8718444 8719097 -20285559 + R1_DM LINE R1 4407 5066 -290 8 651 3190 176 13 13 chrUextra 8719226 8719993 -20284663 - SAR_DM Satellite Satellite -514 958 192 8 651 693 107 0 0 chrUextra 8719897 8720009 -20284647 + ARS406_DM Unknown Unknown 1 112 -241 8 651 6402 25 9 0 chrUextra 8720111 8720897 -20283759 + R1_DM LINE R1 4555 5347 -9 8 651 6640 20 0 0 chrUextra 8720997 8721785 -20282871 - DIVER_I LTR Pao -2691 2952 2165 8 651 2160 189 74 28 chrUextra 8721891 8722673 -20281983 - TART LINE telomeric -4920 9557 8967 8 651 3297 186 9 8 chrUextra 8722774 8723548 -20281108 + SAR_DM Satellite Satellite 282 1056 -416 8 651 35 63 0 0 chrUextra 8723719 8723782 -20280874 + AT_rich Low_complexity Low_complexity 1 63 0 8 651 27 29 0 0 chrUextra 8724321 8724355 -20280301 + AT_rich Low_complexity Low_complexity 1 34 0 8 651 3499 40 64 2 chrUextra 8724619 8725101 -20279555 + PROTOP DNA P 1 512 -3968 8 651 28 71 0 0 chrUextra 8725240 8725296 -20279360 + AT_rich Low_complexity Low_complexity 1 56 0 8 651 687 149 32 57 chrUextra 8725489 8725646 -20279010 - Gypsy5_LTR LTR Gypsy -201 229 77 8 651 583 73 0 0 chrUextra 8725650 8725732 -20278924 - Jockey2 LINE Jockey -3346 82 1 8 651 1014 183 32 68 chrUextra 8725863 8726203 -20278453 - Gypsy_LTR LTR Gypsy -51 431 104 8 651 2163 8 0 0 chrUextra 8726321 8726570 -20278086 - DMLTR5 LTR Gypsy -17 249 1 8 651 4332 22 11 7 chrUextra 8726570 8727108 -20277548 - ACCORD2_I LTR Gypsy -6128 1084 545 8 651 3288 189 9 8 chrUextra 8727211 8727990 -20276666 + SAR_DM Satellite Satellite 282 1061 -411 8 651 4592 16 0 0 chrUextra 8728095 8728649 -20276007 + PROTOP DNA P 3927 4480 0 8 651 1094 8 0 0 chrUextra 8728650 8728783 -20275873 + QUASIMODO_I LTR Gypsy 1567 1699 -4361 8 651 5639 22 13 0 chrUextra 8728984 8729668 -20274988 + CIRCE LINE Composite 5664 6356 0 8 651 806 30 0 0 chrUextra 8729668 8729769 -20274887 + CIRCE LINE Composite 1 101 -6255 8 651 1900 0 0 5 chrUextra 8729901 8730124 -20274532 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 651 21 95 0 0 chrUextra 8730136 8730199 -20274457 + AT_rich Low_complexity Low_complexity 1 63 0 8 651 34 24 0 0 chrUextra 8730412 8730453 -20274203 + AT_rich Low_complexity Low_complexity 1 41 0 8 651 1378 33 0 0 chrUextra 8730756 8730936 -20273720 - PROTOP_A DNA P -729 376 197 8 651 4106 93 2 7 chrUextra 8730937 8731543 -20273113 + R1_DM LINE R1 720 1322 -4034 8 651 3064 197 24 22 chrUextra 8731644 8732425 -20272231 + SAR_DM Satellite Satellite 1 782 -203 8 651 21 36 0 0 chrUextra 8732539 8732567 -20272089 + AT_rich Low_complexity Low_complexity 1 28 0 8 651 2959 52 18 0 chrUextra 8732851 8733239 -20271417 - BS2 LINE Jockey -1605 3116 2722 8 651 268 222 0 0 chrUextra 8733239 8733302 -20271354 + Copia_I LTR Copia 1976 2038 -2555 8 651 2830 208 11 19 chrUextra 8733417 8734203 -20270453 - SAR_DM Satellite Satellite -268 1204 425 8 651 6690 5 1 0 chrUextra 8734304 8735091 -20269565 - DM297_I LTR Gypsy -3183 2984 2197 8 651 22 56 0 0 chrUextra 8735281 8735317 -20269339 + AT_rich Low_complexity Low_complexity 1 36 0 8 651 366 183 75 19 chrUextra 8735363 8735469 -20269187 + Copia_I LTR Copia 4402 4513 -80 8 651 26 0 0 0 chrUextra 8736830 8736856 -20267800 + AT_rich Low_complexity Low_complexity 1 26 0 8 651 3418 183 8 9 chrUextra 8736969 8737752 -20266904 + SAR_DM Satellite Satellite 224 1005 -467 8 651 28 48 0 0 chrUextra 8738060 8738102 -20266554 + AT_rich Low_complexity Low_complexity 1 42 0 8 651 488 119 36 0 chrUextra 8738375 8738459 -20266197 - NTS_DM Other Other -150 90 4 8 651 414 15 0 43 chrUextra 8738569 8738639 -20266017 - NTS_DM Other Other -78 162 96 8 651 6510 20 0 0 chrUextra 8738739 8739523 -20265133 + FW_DM LINE Jockey 649 1432 -3260 8 651 6727 6 1 0 chrUextra 8739626 8740413 -20264243 - Gypsy4_I LTR Gypsy -4547 1741 954 8 651 2935 205 14 20 chrUextra 8740513 8741300 -20263356 + SAR_DM Satellite Satellite 1 782 -227 8 651 1819 96 99 29 chrUextra 8741400 8741744 -20262912 - BATUMI_I LTR Pao -7595 368 1 8 651 2000 32 7 31 chrUextra 8741744 8742034 -20262622 - BATUMI_I LTR Pao -679 7284 7002 8 651 5843 43 28 1 chrUextra 8742287 8743071 -20261585 + TART LINE telomeric 2008 2812 -11665 8 651 5728 44 29 1 chrUextra 8743181 8743939 -20260717 + R1_DM LINE R1 681 1459 -3897 8 651 6836 0 1 2 chrUextra 8744061 8744848 -20259808 - LSU-rRNA_Dme rRNA rRNA -130 3770 2985 8 651 5911 37 1 5 chrUextra 8744948 8745735 -20258921 - R1_DM LINE R1 -4180 1176 393 8 651 3127 13 0 0 chrUextra 8745835 8746207 -20258449 - Gypsy4_I LTR Gypsy -5543 745 374 8 651 920 70 8 20 chrUextra 8746732 8747509 -20257147 - RSP Satellite Satellite 0 767 1 8 651 198 0 0 0 chrUextra 8747657 8747679 -20256977 + (CAA)n Simple_repeat Simple_repeat 2 23 0 8 651 1167 111 78 0 chrUextra 8749061 8749278 -20255378 + DNAREP1_DM LINE Penelope 1 234 -360 8 651 3301 225 17 27 chrUextra 8749383 8751052 -20253604 + SAR_DM Satellite Satellite 1 1651 -396 8 651 3916 96 0 0 chrUextra 8751157 8751708 -20252948 + Gypsy12_I LTR Gypsy 3167 3717 -1829 8 651 1702 85 0 0 chrUextra 8751707 8751943 -20252713 + Gypsy12_I LTR Gypsy 3511 3746 -1800 8 651 4288 30 97 0 chrUextra 8752044 8752829 -20251827 + DMCR1A LINE CR1 2314 3174 -1296 8 651 6729 2 0 0 chrUextra 8753818 8754604 -20250052 + FW_DM LINE Jockey 1017 1802 -2890 8 651 2381 96 9 33 chrUextra 8754711 8755492 -20249164 + DMSAT6 Satellite Satellite 1 762 -256 8 651 712 105 0 103 chrUextra 8755609 8755938 -20248718 + GA-rich Low_complexity Low_complexity 1 294 0 8 651 1380 47 0 0 chrUextra 8756479 8756651 -20248005 + (TTCTC)n Simple_repeat Simple_repeat 1 172 0 8 651 1188 7 0 0 chrUextra 8757366 8757509 -20247147 + DM1731_I LTR Copia 3834 3976 0 8 651 2644 42 0 0 chrUextra 8757509 8757845 -20246811 + DM1731_LTR LTR Copia 1 336 0 8 651 551 0 133 4 chrUextra 8757845 8758117 -20246539 + (TA)n Simple_repeat Simple_repeat 1 307 0 8 651 34 0 0 0 chrUextra 8758119 8758153 -20246503 + AT_rich Low_complexity Low_complexity 1 34 0 8 651 6765 4 0 0 chrUextra 8758253 8759040 -20245616 + FW_DM LINE Jockey 827 1613 -3079 8 651 3860 110 24 61 chrUextra 8759159 8759925 -20244731 + Gypsy8_I LTR Gypsy 1035 1649 -2698 8 651 4437 76 48 25 chrUextra 8760914 8761700 -20242956 - STALKER4_I LTR Gypsy -4977 1553 750 8 651 2354 84 13 61 chrUextra 8761804 8762588 -20242068 - DMSAT6 Satellite Satellite -25 746 1 8 651 6402 23 0 5 chrUextra 8762688 8763475 -20241181 + FW_DM LINE Jockey 3687 4469 -223 8 651 4342 2 0 0 chrUextra 8763575 8764074 -20240582 + QUASIMODO_LTR LTR Gypsy 160 658 0 8 651 491 87 0 0 chrUextra 8764080 8764149 -20240507 + ROVER-LTR_DM LTR Gypsy 73 141 -226 8 651 324 179 25 13 chrUextra 8764241 8764320 -20240336 + ROVER-I_DM LTR Gypsy 1 80 -6504 8 651 3190 184 41 22 chrUextra 8764474 8765245 -20239411 - SAR_DM Satellite Satellite -540 785 1 8 651 5921 36 15 0 chrUextra 8765349 8766136 -20238520 + MDG1_I LTR Gypsy 4713 5511 -1085 8 651 6616 1 1 0 chrUextra 8766239 8767021 -20237635 + LSU-rRNA_Dme rRNA rRNA 229 1011 -2889 8 651 919 18 0 0 chrUextra 8767123 8767233 -20237423 - DM176_I LTR Gypsy -6310 110 1 8 651 1108 22 0 0 chrUextra 8767233 8767370 -20237286 - DM176_LTR LTR Gypsy 0 507 371 8 651 3961 10 56 0 chrUextra 8767373 8767910 -20236746 - PROTOP_A DNA P -376 729 163 8 651 2238 175 15 6 chrUextra 8768010 8768775 -20235881 - SAR_DM Satellite Satellite -549 771 1 8 651 327 103 17 0 chrUextra 8768724 8768782 -20235874 + ARS406_DM Unknown Unknown 1 59 -294 8 651 3012 189 18 28 chrUextra 8768897 8769683 -20234973 + SAR_DM Satellite Satellite 434 1211 -261 8 651 603 67 0 0 chrUextra 8769784 8769873 -20234783 + (GAGAA)n Simple_repeat Simple_repeat 2 90 0 8 651 1620 0 0 0 chrUextra 8769892 8770252 -20234404 + (CGAGA)n Simple_repeat Simple_repeat 1 360 0 8 651 1341 0 0 0 chrUextra 8770252 8770401 -20234255 + (CAAGA)n Simple_repeat Simple_repeat 1 149 0 8 651 1539 0 0 0 chrUextra 8770401 8770571 -20234085 + (TTGTG)n Simple_repeat Simple_repeat 3 173 0 8 651 1343 36 0 0 chrUextra 8770671 8770836 -20233820 + R1_DM LINE R1 5192 5356 0 8 651 4288 68 3 3 chrUextra 8770869 8771458 -20233198 + R1_DM LINE R1 1 589 -4767 8 651 338 300 7 7 chrUextra 8771990 8772131 -20232525 + Invader3_I LTR Gypsy 2889 3029 -1859 8 651 6010 28 4 3 chrUextra 8772481 8773231 -20231425 - R1_DM LINE R1 0 5356 4606 8 651 31 58 0 0 chrUextra 8773389 8773441 -20231215 + AT_rich Low_complexity Low_complexity 1 52 0 8 651 3146 48 4 14 chrUextra 8773529 8773967 -20230689 - STALKER4_LTR LTR Gypsy -3 399 1 8 651 2977 5 8 8 chrUextra 8774219 8774589 -20230067 + DM297_LTR LTR Gypsy 45 414 0 8 651 782 203 28 9 chrUextra 8775105 8775319 -20229337 - SAR_DM Satellite Satellite -716 756 539 8 651 871 184 28 20 chrUextra 8775330 8775579 -20229077 - SAR_DM Satellite Satellite -683 789 539 8 651 875 188 27 23 chrUextra 8775590 8775852 -20228804 - SAR_DM Satellite Satellite -683 789 527 8 651 3242 185 23 9 chrUextra 8775996 8776777 -20227879 + SAR_DM Satellite Satellite 228 1019 -453 8 651 1458 10 0 14 chrUextra 8776877 8777086 -20227570 + (TTCTC)n Simple_repeat Simple_repeat 1 205 0 8 651 1049 0 0 74 chrUextra 8777123 8777313 -20227343 + (TTCTC)n Simple_repeat Simple_repeat 2 177 0 8 651 232 0 91 36 chrUextra 8777358 8777413 -20227243 + (GA)n Simple_repeat Simple_repeat 1 58 0 8 651 565 155 53 8 chrUextra 8777416 8777663 -20226993 + GA-rich Low_complexity Low_complexity 1 257 0 8 651 6636 15 8 0 chrUextra 8779535 8780321 -20224335 + Copia2_I LTR Copia 1470 2261 -1901 8 651 6578 4 4 4 chrUextra 8780424 8781207 -20223449 - LSU-rRNA_Dme rRNA rRNA -2220 1680 898 8 81 6294 14 50 1 chrUextra 8781307 8782093 -20222563 - R1_DM LINE R1 -762 4594 3771 8 652 238 108 0 0 chrUextra 8782228 8782265 -20222391 + DNAREP1_DM LINE Penelope 1 37 -557 8 652 2954 40 5 3 chrUextra 8782284 8782662 -20221994 + STALKER4_LTR LTR Gypsy 1 379 -23 8 652 515 168 426 30 chrUextra 8782713 8782938 -20221718 + DNAREP1_DM LINE Penelope 50 364 -230 8 652 275 274 120 87 chrUextra 8783428 8783704 -20220952 - Invader1_LTR LTR Gypsy -55 368 84 8 652 231 154 0 0 chrUextra 8783965 8784004 -20220652 - NTS_DM Other Other -201 39 1 8 652 291 104 21 0 chrUextra 8784094 8784142 -20220514 - NTS_DM Other Other -191 49 1 8 652 357 159 53 38 chrUextra 8784142 8784273 -20220383 - NTS_DM Other Other 0 240 108 8 652 862 109 0 0 chrUextra 8784281 8784418 -20220238 - NTS_DM Other Other -103 137 1 8 652 280 104 21 0 chrUextra 8784508 8784556 -20220100 - NTS_DM Other Other -191 49 1 8 652 732 147 46 26 chrUextra 8784556 8784751 -20219905 - NTS_DM Other Other 0 240 42 8 652 4216 2 6 0 chrUextra 8785133 8785637 -20219019 - DOC LINE Jockey -3 4722 4216 8 652 28 48 0 0 chrUextra 8786666 8786708 -20217948 + AT_rich Low_complexity Low_complexity 1 42 0 8 652 32 0 0 0 chrUextra 8787036 8787068 -20217588 + AT_rich Low_complexity Low_complexity 1 32 0 8 652 1769 5 0 5 chrUextra 8787200 8787409 -20217247 + SSU-rRNA_Dme rRNA rRNA 1 208 -1787 8 652 5429 19 0 14 chrUextra 8787509 8788207 -20216449 - QUASIMODO_I LTR Gypsy -1654 4406 3719 8 652 491 45 0 0 chrUextra 8788228 8788295 -20216361 - QUASIMODO_I LTR Gypsy -2643 3417 3351 8 652 6898 0 0 0 chrUextra 8788395 8789181 -20215475 + GTWIN_I LTR Gypsy 3760 4545 -1876 8 652 4772 72 22 40 chrUextra 8790169 8790953 -20213703 + Gypsy10_I LTR Gypsy 58 827 -4451 8 652 2666 181 20 14 chrUextra 8791072 8791720 -20212936 + SAR_DM Satellite Satellite 425 1076 -396 8 652 480 136 87 0 chrUextra 8791735 8791838 -20212818 + SAR_DM Satellite Satellite 547 658 -814 8 652 22 0 0 0 chrUextra 8791939 8791961 -20212695 + AT_rich Low_complexity Low_complexity 1 22 0 8 652 198 107 54 0 chrUextra 8791964 8792020 -20212636 + (TA)n Simple_repeat Simple_repeat 1 59 0 8 652 88 41 0 0 chrUextra 8792020 8792143 -20212513 + AT_rich Low_complexity Low_complexity 1 123 0 8 652 238 134 44 15 chrUextra 8792143 8792211 -20212445 + (TA)n Simple_repeat Simple_repeat 1 70 0 8 652 142 33 0 0 chrUextra 8792212 8792396 -20212260 + AT_rich Low_complexity Low_complexity 1 184 0 8 652 261 188 38 38 chrUextra 8792396 8792569 -20212087 + (TTATA)n Simple_repeat Simple_repeat 1 173 0 8 652 34 0 0 0 chrUextra 8792574 8792608 -20212048 + AT_rich Low_complexity Low_complexity 1 34 0 8 652 238 134 44 15 chrUextra 8792608 8792676 -20211980 + (TA)n Simple_repeat Simple_repeat 1 70 0 8 652 41 21 0 0 chrUextra 8792677 8792725 -20211931 + AT_rich Low_complexity Low_complexity 1 48 0 8 652 6478 15 1 0 chrUextra 8792825 8793611 -20211045 + FW_DM LINE Jockey 2543 3329 -1363 8 652 351 216 0 10 chrUextra 8793711 8793814 -20210842 + XDMR_DM Unknown Unknown 259 360 0 8 652 3293 173 8 19 chrUextra 8793729 8794487 -20210169 - SAR_DM Satellite Satellite -354 1118 369 8 652 1563 170 6 0 chrUextra 8794599 8794923 -20209733 - SAR_DM Satellite Satellite -593 879 554 8 652 618 118 0 0 chrUextra 8794832 8794934 -20209722 + ARS406_DM Unknown Unknown 1 102 -251 8 652 2041 164 9 9 chrUextra 8794950 8795382 -20209274 - SAR_DM Satellite Satellite -425 1047 616 8 652 2840 175 9 12 chrUextra 8795483 8796269 -20208387 - SAR_DM Satellite Satellite -732 783 1 8 652 2281 19 0 0 chrUextra 8796369 8796640 -20208016 - PROTOP_A DNA P -834 271 1 8 652 4138 23 6 0 chrUextra 8796640 8797153 -20207503 + R1_DM LINE R1 2540 3055 -2301 8 652 2395 110 10 18 chrUextra 8797255 8798039 -20206617 - DMSAT6 Satellite Satellite -37 777 1 8 652 213 210 15 61 chrUextra 8798141 8798207 -20206449 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 8 652 866 60 9 0 chrUextra 8798452 8798568 -20206088 + MAX_I LTR Pao 557 673 -7241 8 652 298 0 0 0 chrUextra 8798633 8798669 -20205987 + MAX_I LTR Pao 920 955 -6959 8 652 654 179 64 50 chrUextra 8798709 8798927 -20205729 + MAX_I LTR Pao 938 1158 -6756 8 652 2310 91 4 37 chrUextra 8799028 8799813 -20204843 + DMSAT6 Satellite Satellite 1 758 -28 8 652 4272 4 0 0 chrUextra 8799913 8800403 -20204253 - GTWIN_LTR LTR Gypsy -5 490 1 8 652 436 155 0 0 chrUextra 8800474 8800545 -20204111 - TAHRE LINE telomeric -2867 7596 7526 8 652 6304 20 0 0 chrUextra 8800799 8801585 -20203071 - PROTOP_A DNA P -185 920 135 8 652 6753 0 1 4 chrUextra 8801685 8802471 -20202185 - SSU-rRNA_Dme rRNA rRNA -617 1378 595 8 652 6068 16 3 1 chrUextra 8802576 8803357 -20201299 - Stalker2_I LTR Gypsy -1279 6123 5406 8 652 6740 1 0 0 chrUextra 8803457 8804243 -20200413 - DM412 LTR Gypsy -3979 2918 2133 8 652 625 37 0 0 chrUextra 8804343 8804425 -20200231 - ARS406_DM Unknown Unknown -182 171 90 8 652 602 37 0 0 chrUextra 8804422 8804503 -20200153 - ARS406_DM Unknown Unknown -195 158 78 8 652 2710 172 25 25 chrUextra 8804490 8805129 -20199527 + SAR_DM Satellite Satellite 408 1046 -426 8 652 5436 47 16 6 chrUextra 8805229 8806015 -20198641 - G_DM LINE Jockey -1061 981 204 8 652 6140 10 13 1 chrUextra 8806115 8806901 -20197755 + STALKER4_I LTR Gypsy 5686 6480 -50 8 652 3459 172 19 9 chrUextra 8807005 8807787 -20196869 - SAR_DM Satellite Satellite -435 1037 248 8 652 6355 25 0 0 chrUextra 8808773 8809557 -20195099 + NINJA_I LTR Pao 2106 2889 -3122 8 652 3747 196 5 5 chrUextra 8809660 8810445 -20194211 + ROVER-I_DM LTR Gypsy 3704 4488 -2096 8 652 867 207 147 60 chrUextra 8811437 8811817 -20192839 - HETA LINE telomeric -358 5723 5311 8 652 3114 177 18 16 chrUextra 8812317 8813103 -20191553 - SAR_DM Satellite Satellite -603 787 1 8 652 3329 242 0 0 chrUextra 8813220 8813988 -20190668 + Gypsy6_I LTR Gypsy 3302 4069 -2943 8 652 6598 9 5 2 chrUextra 8814089 8814875 -20189781 + IVK_DM LINE I 3431 4218 -1184 8 652 6650 0 0 0 chrUextra 8815863 8816647 -20188009 - ROO_I LTR Pao -130 8126 7343 8 652 5611 1 0 0 chrUextra 8816747 8817425 -20187231 + ROO_I LTR Pao 7579 8256 0 8 652 861 9 9 0 chrUextra 8817425 8817533 -20187123 + ROO_LTR LTR Pao 1 109 -319 8 652 6919 0 0 0 chrUextra 8817633 8818419 -20186237 - MAX_I LTR Pao -3624 4290 3505 8 652 5382 0 2 0 chrUextra 8818519 8819132 -20185524 + LSU-rRNA_Dme rRNA rRNA 3287 3900 0 8 652 22 56 0 0 chrUextra 8819204 8819240 -20185416 + AT_rich Low_complexity Low_complexity 1 36 0 8 652 6652 8 1 0 chrUextra 8819406 8820191 -20184465 - FW_DM LINE Jockey -1787 2905 2120 8 652 2429 154 114 13 chrUextra 8820296 8820898 -20183758 + TART LINE telomeric 8952 9590 -4887 8 652 6709 1 2 1 chrUextra 8821177 8821963 -20182693 + R1_DM LINE R1 1521 2307 -3049 8 652 1096 15 0 0 chrUextra 8822063 8822196 -20182460 + ROO_I LTR Pao 8124 8256 0 8 652 3580 19 2 0 chrUextra 8822196 8822623 -20182033 + ROO_LTR LTR Pao 1 428 0 8 652 1620 14 0 10 chrUextra 8822952 8823727 -20180929 + (ATAAG)n Simple_repeat Simple_repeat 1 767 0 8 652 6079 47 0 0 chrUextra 8823835 8824621 -20180035 - G2_DM LINE Jockey -1669 1433 648 8 652 6929 0 0 0 chrUextra 8824721 8825507 -20179149 - Gypsy2_I LTR Gypsy -2507 3628 2843 8 652 3056 190 15 23 chrUextra 8825607 8826393 -20178263 + SAR_DM Satellite Satellite 429 1208 -264 8 652 6639 4 4 3 chrUextra 8826495 8827279 -20177377 - LSU-rRNA_Dme rRNA rRNA -2220 1680 896 8 652 893 140 6 30 chrUextra 8827383 8827552 -20177104 - TART LINE telomeric -7328 7149 6985 8 652 437 45 88 15 chrUextra 8827552 8827620 -20177036 - TAHRE LINE telomeric -11 10452 10380 8 652 2051 165 167 20 chrUextra 8827617 8828156 -20176500 - HETA LINE telomeric 0 6081 5464 8 652 3207 192 6 9 chrUextra 8828272 8829051 -20175605 - SAR_DM Satellite Satellite -398 1074 298 8 652 398 162 31 93 chrUextra 8829378 8829507 -20175149 - R1_DM LINE R1 -338 5018 4898 8 652 348 286 70 18 chrUextra 8829765 8829936 -20174720 + Gypsy6_I LTR Gypsy 6404 6583 -429 8 652 3583 63 181 4 chrUextra 8830037 8830599 -20174057 - R1_DM LINE R1 -4672 684 23 8 652 1734 15 0 0 chrUextra 8830620 8830822 -20173834 - R1_DM LINE R1 0 5356 5155 8 652 262 106 0 21 chrUextra 8830926 8830974 -20173682 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 652 230 293 62 73 chrUextra 8831523 8831700 -20172956 - Invader1_LTR LTR Gypsy -55 368 194 8 652 291 28 0 0 chrUextra 8831807 8831843 -20172813 + BATUMI_I LTR Pao 6385 6420 -1543 8 652 4382 19 19 11 chrUextra 8831869 8832439 -20172217 - BATUMI_I LTR Pao -962 7001 6427 8 652 868 62 0 0 chrUextra 8832462 8832591 -20172065 + BATUMI_I LTR Pao 7303 7431 -532 8 652 6402 24 4 0 chrUextra 8832692 8833477 -20171179 + FW_DM LINE Jockey 2855 3642 -1050 8 652 437 126 103 62 chrUextra 8833603 8833761 -20170895 - Invader1_LTR LTR Gypsy -199 224 1 8 652 21 0 0 0 chrUextra 8833761 8833782 -20170874 + AT_rich Low_complexity Low_complexity 1 21 0 8 652 247 122 0 0 chrUextra 8833860 8833901 -20170755 - BARI1 DNA Tc1 -1707 43 3 8 652 3918 29 0 2 chrUextra 8833869 8834362 -20170294 + IDEFIX_LTR LTR Gypsy 1 492 -102 8 652 2663 180 8 5 chrUextra 8834466 8835057 -20169599 - SAR_DM Satellite Satellite -615 857 265 8 652 1606 5 0 0 chrUextra 8835048 8835247 -20169409 - FW_DM LINE Jockey 0 4692 4494 8 652 6239 31 1 0 chrUextra 8835347 8836132 -20168524 - MDG1_I LTR Gypsy -3622 2974 2189 8 652 2151 15 0 4 chrUextra 8836251 8836512 -20168144 + CIRCE LINE Composite 711 970 -5386 8 652 2265 54 0 77 chrUextra 8836654 8836994 -20167662 + CIRCE LINE Composite 973 1286 -5070 8 652 6864 1 1 0 chrUextra 8837117 8837902 -20166754 + R2_DM LINE R2 941 1726 -1881 8 652 6601 6 9 1 chrUextra 8838002 8838787 -20165869 + FW_DM LINE Jockey 2034 2824 -1868 8 652 2946 183 50 27 chrUextra 8838889 8839672 -20164984 - SAR_DM Satellite Satellite -549 800 1 8 652 6832 2 0 0 chrUextra 8839772 8840557 -20164099 - DM1731_I LTR Copia -764 3212 2428 8 652 2350 111 75 82 chrUextra 8840657 8841307 -20163349 + BATUMI_I LTR Pao 124 769 -7194 8 652 493 131 0 21 chrUextra 8841348 8841442 -20163214 + BATUMI_I LTR Pao 749 840 -7123 8 652 332 302 62 62 chrUextra 8841661 8842078 -20162578 - BLASTOPIA_I LTR Gypsy -1885 2596 2180 8 652 1199 14 0 0 chrUextra 8842427 8842573 -20162083 - FW_DM LINE Jockey -4366 326 181 8 652 350 111 32 0 chrUextra 8842579 8842642 -20162014 - DNAREP1_DM LINE Penelope -348 246 182 8 652 1911 5 0 0 chrUextra 8842994 8843212 -20161444 - PROTOP_A DNA P 0 1105 888 8 652 3851 30 0 0 chrUextra 8843312 8843782 -20160874 - R1_DM LINE R1 -861 4495 4026 8 652 2493 16 3 0 chrUextra 8843792 8844097 -20160559 - R1_DM LINE R1 -1690 3666 3361 8 652 6858 0 1 1 chrUextra 8844197 8844982 -20159674 + LSU-rRNA_Dme rRNA rRNA 3034 3818 -82 8 652 5195 16 0 118 chrUextra 8845082 8845867 -20158789 + CIRCE LINE Composite 1342 2033 -4323 8 652 1519 198 0 0 chrUextra 8845971 8846285 -20158371 - Gypsy5_I LTR Gypsy -1960 4549 4236 8 652 1368 170 208 58 chrUextra 8846267 8846752 -20157904 - Gypsy5_I LTR Gypsy -2624 3885 3328 8 652 3109 203 11 19 chrUextra 8846852 8847633 -20157023 - SAR_DM Satellite Satellite -556 774 1 8 652 491 16 0 16 chrUextra 8847737 8847799 -20156857 - NTS_DM Other Other -179 61 1 8 652 1734 21 17 17 chrUextra 8847799 8848039 -20156617 - NTS_DM Other Other 0 240 1 8 652 1408 20 20 20 chrUextra 8848039 8848242 -20156414 - NTS_DM Other Other 0 240 38 8 652 817 0 0 0 chrUextra 8848242 8848338 -20156318 - NTS_DM Other Other -107 133 38 8 652 832 9 9 27 chrUextra 8848338 8848449 -20156207 - NTS_DM Other Other -107 133 25 8 652 23 54 0 0 chrUextra 8848475 8848512 -20156144 + AT_rich Low_complexity Low_complexity 1 37 0 8 652 6434 1 0 0 chrUextra 8848622 8849407 -20155249 + TRANSPAC_I LTR Gypsy 3329 4113 -477 8 652 6023 45 5 3 chrUextra 8849509 8850292 -20154364 + R1_DM LINE R1 948 1732 -3624 8 652 641 92 20 10 chrUextra 8850412 8850511 -20154145 - STALKER4_LTR LTR Gypsy -23 379 280 8 652 3716 22 0 24 chrUextra 8850512 8850978 -20153678 + CIRCE LINE Composite 1428 1882 -4474 8 652 364 313 21 21 chrUextra 8850987 8851173 -20153483 + Gypsy12_I LTR Gypsy 3835 4020 -1526 8 652 906 26 0 49 chrUextra 8851054 8851176 -20153480 + CIRCE LINE Composite 1888 2003 -4353 8 652 4349 83 57 29 chrUextra 8851277 8852062 -20152594 - STALKER4_I LTR Gypsy -5054 1476 670 8 652 22 0 0 0 chrUextra 8853108 8853130 -20151526 + AT_rich Low_complexity Low_complexity 1 22 0 8 652 3689 2 0 0 chrUextra 8853934 8854360 -20150296 - LSU-rRNA_Dme rRNA rRNA -835 3065 2640 8 652 3083 6 0 0 chrUextra 8854358 8854717 -20149939 - R1_DM LINE R1 0 5356 4998 8 652 3044 68 5 0 chrUextra 8854817 8855227 -20149429 - BS3_DM LINE Jockey -853 937 526 8 652 2734 73 0 0 chrUextra 8855227 8855597 -20149059 - BS3_DM LINE Jockey -1369 421 52 8 652 1108 124 30 22 chrUextra 8855817 8856048 -20148608 + NTS_DM Other Other 8 240 0 8 652 827 108 0 0 chrUextra 8856194 8856324 -20148332 + NTS_DM Other Other 8 137 -103 8 652 433 127 53 38 chrUextra 8856332 8856463 -20148193 + NTS_DM Other Other 108 240 0 8 652 6281 1 1 32 chrUextra 8856587 8857372 -20147284 - LSU-rRNA_Dme rRNA rRNA -3123 777 17 8 652 2527 3 0 0 chrUextra 8857472 8857760 -20146896 - Gypsy4_I LTR Gypsy -3711 2577 2290 8 652 2870 3 63 0 chrUextra 8857760 8857908 -20146748 - Stalker3_LTR LTR Gypsy 0 372 225 8 652 207 0 0 0 chrUextra 8857908 8857931 -20146725 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 652 2870 3 63 0 chrUextra 8857931 8858132 -20146524 - Stalker3_LTR LTR Gypsy -148 224 2 8 652 1099 0 0 0 chrUextra 8858132 8858257 -20146399 - Gypsy4_I LTR Gypsy -3995 2293 2169 8 652 6500 22 1 0 chrUextra 8858357 8859142 -20145514 + R1_DM LINE R1 4440 5225 -131 8 652 2815 225 22 14 chrUextra 8859245 8860017 -20144639 + SAR_DM Satellite Satellite 1 778 -208 8 652 277 250 0 0 chrUextra 8860405 8860477 -20144179 + BS2 LINE Jockey 4148 4219 -502 8 652 3307 170 15 22 chrUextra 8861012 8861794 -20142862 + SAR_DM Satellite Satellite 335 1111 -361 8 652 3384 179 10 11 chrUextra 8861897 8862682 -20141974 - SAR_DM Satellite Satellite -439 1033 250 8 652 3186 173 18 22 chrUextra 8862782 8863567 -20141089 + SAR_DM Satellite Satellite 383 1164 -308 8 652 476 18 0 0 chrUextra 8863667 8863724 -20140932 + NINJA_I LTR Pao 5955 6011 0 8 652 2371 38 3 28 chrUextra 8863724 8864048 -20140608 + NINJA_LTR LTR Pao 1 316 -1 8 652 4682 4 0 0 chrUextra 8864552 8865097 -20139559 - FW_DM LINE Jockey -4147 545 1 8 652 944 26 0 0 chrUextra 8865437 8865551 -20139105 + ACCORD2_I LTR Gypsy 1254 1367 -5845 8 652 4103 24 19 12 chrUextra 8865636 8866222 -20138434 + ACCORD2_I LTR Gypsy 1508 2097 -5115 8 652 1807 51 88 0 chrUextra 8866809 8867107 -20137549 + PROTOP_B DNA P 451 754 -399 8 652 6649 6 0 0 chrUextra 8867207 8867992 -20136664 + Invader2_I LTR Gypsy 770 1554 -3038 8 652 2566 10 0 0 chrUextra 8868092 8868391 -20136265 + LSU-rRNA_Dme rRNA rRNA 2344 2642 -1258 8 652 4058 14 2 2 chrUextra 8868383 8868877 -20135779 + R1_DM LINE R1 3726 4219 -1137 8 652 6361 17 6 8 chrUextra 8868977 8869762 -20134894 + FW_DM LINE Jockey 3632 4415 -277 8 652 352 0 0 0 chrUextra 8869868 8869910 -20134746 + BATUMI_I LTR Pao 7922 7963 0 8 652 2242 21 0 27 chrUextra 8869910 8870203 -20134453 + BATUMI_I LTR Pao 7002 7286 -677 8 652 2265 22 0 214 chrUextra 8870193 8870647 -20134009 + G_DM LINE Jockey 638 994 -3352 8 652 3133 188 8 9 chrUextra 8870774 8871526 -20133130 - SAR_DM Satellite Satellite -396 1076 326 8 652 724 149 118 41 chrUextra 8871633 8871903 -20132753 - Invader1_LTR LTR Gypsy -72 351 1 8 652 21 0 0 0 chrUextra 8871903 8871924 -20132732 + AT_rich Low_complexity Low_complexity 1 21 0 8 652 269 98 0 0 chrUextra 8872002 8872043 -20132613 - BARI1 DNA Tc1 -1707 43 3 8 652 3149 22 62 0 chrUextra 8872011 8872417 -20132239 + IDEFIX_LTR LTR Gypsy 1 431 -163 8 652 2287 84 52 15 chrUextra 8872517 8873299 -20131357 - DMSAT6 Satellite Satellite -29 811 1 8 652 5683 42 52 3 chrUextra 8873402 8874186 -20130470 + DOC2_DM LINE Jockey 843 1665 -3128 8 652 6284 27 1 1 chrUextra 8874286 8875070 -20129586 - R1_DM LINE R1 -1402 3954 3171 8 652 231 36 0 0 chrUextra 8875597 8875625 -20129031 + (TTG)n Simple_repeat Simple_repeat 2 29 0 8 652 729 79 32 0 chrUextra 8875791 8875917 -20128739 + PROTOP DNA P 617 746 -3734 8 652 246 30 0 0 chrUextra 8875921 8875954 -20128702 + PROTOP_B DNA P 951 983 -170 8 652 317 281 104 86 chrUextra 8876550 8876830 -20127826 - Invader1_LTR LTR Gypsy -55 368 84 8 652 22 35 0 0 chrUextra 8877060 8877089 -20127567 + AT_rich Low_complexity Low_complexity 1 29 0 8 652 220 141 46 15 chrUextra 8877376 8877441 -20127215 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 652 5914 4 3 1 chrUextra 8877822 8878519 -20126137 + Invader1_I LTR Gypsy 2489 3186 0 8 652 702 12 0 11 chrUextra 8878519 8878606 -20126050 + Invader1_LTR LTR Gypsy 1 86 -337 8 652 6536 3 4 0 chrUextra 8878706 8879490 -20125166 + MDG1_I LTR Gypsy 1154 1940 -4656 8 652 284 122 24 24 chrUextra 8879840 8879924 -20124732 + A-rich Low_complexity Low_complexity 1 84 0 8 652 1103 48 7 0 chrUextra 8880227 8880374 -20124282 - DMRT1A LINE R1 -13 5170 5023 8 652 3402 176 12 9 chrUextra 8880488 8881258 -20123398 - SAR_DM Satellite Satellite -397 1075 304 8 652 4447 2 0 0 chrUextra 8881358 8881864 -20122792 - SSU-rRNA_Dme rRNA rRNA -1489 506 1 8 652 32 0 0 0 chrUextra 8881996 8882028 -20122628 + AT_rich Low_complexity Low_complexity 1 32 0 8 652 5000 26 2 0 chrUextra 8883126 8883734 -20120922 + R1_DM LINE R1 4458 5066 -290 8 652 887 44 0 9 chrUextra 8883731 8883846 -20120810 + R1_DM LINE R1 5243 5356 0 8 652 258 0 0 0 chrUextra 8883879 8883910 -20120746 + R1_DM LINE R1 1 31 -5325 8 652 277 106 21 0 chrUextra 8884040 8884087 -20120569 + NTS_DM Other Other 1 48 -192 8 652 981 108 0 6 chrUextra 8884185 8884352 -20120304 + NTS_DM Other Other 8 173 -67 8 652 306 83 21 0 chrUextra 8884382 8884430 -20120226 + NTS_DM Other Other 1 49 -191 8 652 1108 124 30 22 chrUextra 8884526 8884757 -20119899 + NTS_DM Other Other 8 240 0 8 652 6831 3 0 0 chrUextra 8884894 8885678 -20118978 - R2_DM LINE R2 -2115 1492 709 8 652 1150 70 6 0 chrUextra 8885782 8885954 -20118702 + ARS406_DM Unknown Unknown 1 173 -180 8 652 2705 175 8 8 chrUextra 8885974 8886561 -20118095 - SAR_DM Satellite Satellite -614 858 272 8 652 4010 190 1 0 chrUextra 8886662 8887446 -20117210 - ROVER-I_DM LTR Gypsy -3443 3141 2357 8 652 2967 176 9 16 chrUextra 8887546 8888330 -20116326 - SAR_DM Satellite Satellite -242 1230 192 8 652 774 243 162 0 chrUextra 8888439 8888674 -20115982 - Invader3_I LTR Gypsy -4253 635 363 8 652 269 178 0 0 chrUextra 8888683 8888728 -20115928 - BS2 LINE Jockey -439 4282 4238 8 652 695 0 0 40 chrUextra 8888822 8888921 -20115735 - DOC2_DM LINE Jockey -1 4792 4698 8 652 2627 20 0 0 chrUextra 8888921 8889214 -20115442 - DOC2_DM LINE Jockey -303 4490 4198 8 652 2521 121 20 54 chrUextra 8889314 8889812 -20114844 - BATUMI_I LTR Pao -6734 1229 749 8 652 633 142 147 49 chrUextra 8889853 8890098 -20114558 - BATUMI_I LTR Pao -7194 769 501 8 652 411 0 0 0 chrUextra 8890198 8890242 -20114414 - NTS_DM Other Other -159 81 38 8 652 898 9 9 27 chrUextra 8890242 8890353 -20114303 - NTS_DM Other Other -107 133 25 8 652 21 57 0 0 chrUextra 8890380 8890415 -20114241 + AT_rich Low_complexity Low_complexity 1 35 0 8 652 1350 18 0 6 chrUextra 8890415 8890580 -20114076 - NTS_DM Other Other -39 201 38 8 652 936 9 0 27 chrUextra 8890580 8890692 -20113964 - NTS_DM Other Other -107 133 25 8 652 1350 18 0 6 chrUextra 8890744 8890909 -20113747 - NTS_DM Other Other -39 201 38 8 652 549 14 27 0 chrUextra 8890909 8890982 -20113674 - NTS_DM Other Other -107 133 59 8 652 6679 24 5 3 chrUextra 8891082 8891866 -20112790 + DMRT1A LINE R1 2902 3687 -1496 8 652 4605 0 0 0 chrUextra 8891966 8892464 -20112192 + NOMAD_LTR LTR Gypsy 21 518 0 8 652 873 124 0 0 chrUextra 8892467 8892746 -20111910 + (TA)n Simple_repeat Simple_repeat 1 279 0 8 652 7147 1 1 0 chrUextra 8892850 8893632 -20111024 + FW_DM LINE Jockey 869 1651 -3041 8 652 2168 4 0 32 chrUextra 8893734 8894011 -20110645 + HMSBEAGLE_I LTR Gypsy 527 796 -5733 8 652 974 29 52 12 chrUextra 8894011 8894183 -20110473 + (TTA)n Simple_repeat Simple_repeat 1 179 0 8 652 2840 9 3 6 chrUextra 8894183 8894518 -20110138 + HMSBEAGLE_I LTR Gypsy 969 1302 -5227 8 652 2603 93 16 16 chrUextra 8894618 8894988 -20109668 + Gypsy12_I LTR Gypsy 1603 1972 -3574 8 652 3058 99 2 7 chrUextra 8894984 8895402 -20109254 + Gypsy12_I LTR Gypsy 2196 2611 -2935 8 652 560 144 192 0 chrUextra 8895531 8895635 -20109021 + HOBO DNA hAT 193 316 -2700 8 652 2259 90 184 23 chrUextra 8895636 8896033 -20108623 + PROTOP DNA P 17 477 -4003 8 652 1864 80 0 0 chrUextra 8896010 8896259 -20108397 + HOBO DNA hAT 330 578 -2438 8 652 237 67 0 0 chrUextra 8896256 8896286 -20108370 - Baggins1 LINE LOA -589 4864 4835 8 652 4140 29 25 0 chrUextra 8896386 8896869 -20107787 - MAX_I LTR Pao -4984 2930 2436 8 652 2651 13 0 3 chrUextra 8896869 8897170 -20107486 - MAX_I LTR Pao -5789 2125 1826 8 652 4716 38 2 0 chrUextra 8897270 8897818 -20106838 + Baggins1 LINE LOA 4808 5356 -97 8 652 2072 22 0 4 chrUextra 8897822 8898054 -20106602 + Baggins1 LINE LOA 5017 5247 -206 8 652 3222 187 13 20 chrUextra 8898154 8898936 -20105720 - SAR_DM Satellite Satellite -598 776 1 8 652 6491 1 3 59 chrUextra 8899922 8900706 -20103950 - LSU-rRNA_Dme rRNA rRNA -1738 2162 1423 8 652 7000 5 15 0 chrUextra 8900806 8901590 -20103066 + DMRT1B LINE R1 4248 5043 -140 8 652 1511 12 0 0 chrUextra 8901690 8901861 -20102795 + R1_DM LINE R1 4896 5066 -290 8 652 983 44 0 0 chrUextra 8901858 8901972 -20102684 + R1_DM LINE R1 5243 5356 0 8 652 3592 71 4 4 chrUextra 8902005 8902474 -20102182 + R1_DM LINE R1 1 469 -4887 8 652 7191 9 0 1 chrUextra 8903458 8904242 -20100414 + Copia2_I LTR Copia 1598 2380 -1782 8 652 2581 97 12 14 chrUextra 8904342 8905109 -20099547 + DMSAT6 Satellite Satellite 1 765 -74 8 652 6385 22 86 1 chrUextra 8905226 8906010 -20098646 + R1_DM LINE R1 3909 4758 -598 8 652 7192 0 3 3 chrUextra 8906111 8906894 -20097762 + SSU-rRNA_Dme rRNA rRNA 850 1632 -363 8 652 898 9 9 27 chrUextra 8907039 8907150 -20097506 + NTS_DM Other Other 25 133 -107 8 652 876 0 0 0 chrUextra 8907150 8907246 -20097410 + NTS_DM Other Other 38 133 -107 8 652 1516 25 20 20 chrUextra 8907246 8907449 -20097207 + NTS_DM Other Other 38 240 0 8 652 1878 21 17 17 chrUextra 8907449 8907689 -20096967 + NTS_DM Other Other 1 240 0 8 652 819 11 0 0 chrUextra 8907689 8907778 -20096878 + NTS_DM Other Other 1 89 -151 8 652 437 69 0 0 chrUextra 8908471 8908529 -20096127 - DNAREP1_DM LINE Penelope -9 585 528 8 652 545 122 16 73 chrUextra 8908533 8908657 -20095999 - DNAREP1_DM LINE Penelope -279 315 199 8 652 1884 25 4 59 chrUextra 8908940 8909194 -20095462 - ALUII_DM Unknown Unknown 0 240 1 8 652 21 57 0 0 chrUextra 8909194 8909229 -20095427 + AT_rich Low_complexity Low_complexity 1 35 0 8 652 22 35 0 0 chrUextra 8909426 8909455 -20095201 + AT_rich Low_complexity Low_complexity 1 29 0 8 652 3684 187 9 8 chrUextra 8909648 8910430 -20094226 + SAR_DM Satellite Satellite 224 1006 -466 8 652 2122 176 6 6 chrUextra 8910530 8911308 -20093348 + SAR_DM Satellite Satellite 1 778 -558 8 652 6346 32 82 0 chrUextra 8911414 8912198 -20092458 - R1_DM LINE R1 -3056 2300 1453 8 652 628 26 0 13 chrUextra 8912298 8912376 -20092280 + Invader2_I LTR Gypsy 4516 4592 0 8 652 2329 23 8 0 chrUextra 8912376 8912640 -20092016 + Invader2_LTR LTR Gypsy 1 266 0 8 81 1489 254 109 22 chrUextra 8912640 8913082 -20091574 + Gypsy2_I LTR Gypsy 2722 3202 -2933 8 653 6747 23 3 5 chrUextra 8913182 8913966 -20090690 + R1_DM LINE R1 4385 5166 -190 8 653 6857 6 3 1 chrUextra 8914066 8914850 -20089806 + DM297_I LTR Gypsy 8 792 -5375 8 653 3256 188 17 26 chrUextra 8914955 8915734 -20088922 - SAR_DM Satellite Satellite -255 1217 446 8 653 1034 83 0 0 chrUextra 8916718 8916862 -20087794 - ARS406_DM Unknown Unknown -209 144 1 8 653 3630 164 18 15 chrUextra 8916756 8917498 -20087158 + SAR_DM Satellite Satellite 180 923 -549 8 653 2450 0 0 0 chrUextra 8917602 8917872 -20086784 + MAX_I LTR Pao 7645 7914 0 8 653 2932 6 0 0 chrUextra 8917872 8918193 -20086463 + MAX_LTR LTR Pao 1 321 0 8 653 965 173 32 0 chrUextra 8918192 8918377 -20086279 + SAR_DM Satellite Satellite 533 723 -749 8 653 2315 16 0 0 chrUextra 8918486 8918742 -20085914 + R1_DM LINE R1 5101 5356 0 8 653 3864 65 4 4 chrUextra 8918775 8919270 -20085386 + R1_DM LINE R1 1 495 -4861 8 653 2656 7 7 10 chrUextra 8919370 8919675 -20084981 - LSU-rRNA_Dme rRNA rRNA -2531 1369 1066 8 653 4022 0 0 0 chrUextra 8919675 8920103 -20084553 - ROO_LTR LTR Pao 0 428 1 8 653 472 0 0 0 chrUextra 8920103 8920154 -20084502 - LSU-rRNA_Dme rRNA rRNA -2830 1070 1020 8 653 380 97 16 0 chrUextra 8920254 8920316 -20084340 + (TCTCC)n Simple_repeat Simple_repeat 2 64 0 8 653 881 19 9 0 chrUextra 8920321 8920428 -20084228 + (GAGAA)n Simple_repeat Simple_repeat 1 108 0 8 653 349 354 1 36 chrUextra 8921138 8921348 -20083308 - Gypsy3_I LTR Gypsy -4601 1534 1179 8 653 29 47 0 0 chrUextra 8922254 8922297 -20082359 + AT_rich Low_complexity Low_complexity 1 43 0 8 653 32 0 0 0 chrUextra 8922625 8922657 -20081999 + AT_rich Low_complexity Low_complexity 1 32 0 8 653 3162 80 70 14 chrUextra 8922906 8923389 -20081267 + PROTOP_B DNA P 644 1153 0 8 653 238 111 43 22 chrUextra 8923582 8923628 -20081028 + DNAREP1_DM LINE Penelope 250 296 -298 8 653 360 64 0 0 chrUextra 8923629 8923676 -20080980 + DNAREP1_DM LINE Penelope 185 231 -363 8 653 1413 259 163 0 chrUextra 8924082 8924572 -20080084 + Gypsy6_I LTR Gypsy 1940 2836 -4176 8 653 2223 4 0 0 chrUextra 8924672 8924910 -20079746 - LSU-rRNA_Dme rRNA rRNA -1023 2877 2640 8 653 4885 9 2 2 chrUextra 8924908 8925455 -20079201 - R1_DM LINE R1 0 5356 4810 8 653 961 82 0 0 chrUextra 8925557 8925692 -20078964 - ARS406_DM Unknown Unknown -218 135 1 8 653 3415 187 9 14 chrUextra 8925586 8926324 -20078332 + SAR_DM Satellite Satellite 180 914 -558 8 653 2202 28 3 101 chrUextra 8926438 8926754 -20077902 + Gypsy12_LTR LTR Gypsy 652 936 -1400 8 653 644 176 76 46 chrUextra 8926761 8926958 -20077698 - DMCR1A LINE CR1 -41 4429 4227 8 653 2916 34 90 16 chrUextra 8927321 8927709 -20076947 + IDEFIX_LTR LTR Gypsy 178 594 0 8 653 220 200 13 51 chrUextra 8927901 8927980 -20076676 + A-rich Low_complexity Low_complexity 1 76 0 8 653 1343 264 41 46 chrUextra 8928205 8928972 -20075684 - SAR_DM Satellite Satellite -723 763 1 8 653 3824 7 2 2 chrUextra 8929087 8929514 -20075142 - DOC LINE Jockey -1889 2836 2410 8 653 1903 157 8 6 chrUextra 8929501 8929853 -20074803 - SAR_DM Satellite Satellite -794 678 326 8 653 6739 24 1 1 chrUextra 8929970 8930753 -20073903 - R1_DM LINE R1 -1052 4304 3522 8 653 3811 123 121 6 chrUextra 8930853 8931521 -20073135 - TART LINE telomeric -6999 7478 6734 8 653 332 193 60 0 chrUextra 8931553 8931636 -20073020 - TART_B1 LINE telomeric -2339 8315 8228 8 653 1127 138 35 22 chrUextra 8931768 8931998 -20072658 - NTS_DM Other Other 0 240 8 8 653 296 125 21 0 chrUextra 8932096 8932144 -20072512 - NTS_DM Other Other -191 49 1 8 653 1115 139 20 5 chrUextra 8932175 8932377 -20072279 - NTS_DM Other Other -35 205 1 8 653 277 128 21 0 chrUextra 8932468 8932515 -20072141 - NTS_DM Other Other -192 48 1 8 653 5434 19 16 2 chrUextra 8932670 8933311 -20071345 + G_DM LINE Jockey 1 650 -3696 8 653 649 43 0 31 chrUextra 8933306 8933402 -20071254 + BATUMI_I LTR Pao 6997 7089 -874 8 653 6956 1 3 0 chrUextra 8933502 8934284 -20070372 + TABOR_I LTR Gypsy 1630 2413 -3923 8 653 6809 27 0 1 chrUextra 8934385 8935168 -20069488 + R1_DM LINE R1 1344 2125 -3231 8 653 412 255 119 94 chrUextra 8935467 8935753 -20068903 - Invader1_LTR LTR Gypsy -47 376 84 8 653 434 150 0 24 chrUextra 8935962 8936044 -20068612 + DMLTR5 LTR Gypsy 44 123 -143 8 653 2468 121 15 14 chrUextra 8936151 8936934 -20067722 + DMSAT6 Satellite Satellite 1 784 -85 8 653 7161 3 1 3 chrUextra 8937034 8937817 -20066839 - LSU-rRNA_Dme rRNA rRNA -2446 1454 673 8 653 6928 10 46 0 chrUextra 8937919 8938700 -20065956 - DM1731_I LTR Copia -1822 2154 1338 8 653 297 68 23 0 chrUextra 8938800 8938844 -20065812 - ARS406_DM Unknown Unknown -308 45 1 8 653 3633 187 9 10 chrUextra 8938805 8939583 -20065073 + SAR_DM Satellite Satellite 246 1022 -450 8 653 6618 18 0 24 chrUextra 8939683 8940464 -20064192 - QUASIMODO_I LTR Gypsy -5027 1033 272 8 653 2092 216 97 46 chrUextra 8940589 8941330 -20063326 + Gypsy12_LTR LTR Gypsy 831 1609 -727 8 653 237 65 0 0 chrUextra 8941495 8941526 -20063130 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 653 3850 5 0 2 chrUextra 8943215 8943643 -20061013 - R1_DM LINE R1 -2594 2762 2336 8 653 3221 14 0 0 chrUextra 8943643 8943998 -20060658 + R1_DM LINE R1 4212 4566 -790 8 653 22 0 0 0 chrUextra 8944130 8944152 -20060504 + AT_rich Low_complexity Low_complexity 1 22 0 8 653 2405 180 47 34 chrUextra 8944179 8944737 -20059919 + Stalker2_I LTR Gypsy 291 855 -6547 8 653 1011 29 0 0 chrUextra 8944745 8944881 -20059775 - FW_DM LINE Jockey -4 4688 4553 8 653 7033 5 1 1 chrUextra 8944981 8945764 -20058892 - R1_DM LINE R1 -1436 3920 3138 8 653 6572 1 1 3 chrUextra 8945864 8946586 -20058070 - BLASTOPIA_I LTR Gypsy -3760 721 1 8 653 355 0 17 0 chrUextra 8946586 8946644 -20058012 - BLASTOPIA_LTR LTR Gypsy 0 275 217 8 653 1401 6 0 18 chrUextra 8946831 8946996 -20057660 - NTS_DM Other Other -78 162 1 8 653 1995 4 17 13 chrUextra 8946996 8947235 -20057421 - NTS_DM Other Other 0 240 1 8 653 1956 13 17 13 chrUextra 8947235 8947474 -20057182 - NTS_DM Other Other 0 240 1 8 653 350 0 71 54 chrUextra 8947474 8947530 -20057126 - NTS_DM Other Other 0 240 184 8 653 6725 24 17 1 chrUextra 8947630 8948411 -20056245 + R1_DM LINE R1 4184 4976 -380 8 653 3269 178 43 28 chrUextra 8948514 8949296 -20055360 + SAR_DM Satellite Satellite 415 1208 -264 8 653 366 23 0 0 chrUextra 8950126 8950169 -20054487 + (GAGAA)n Simple_repeat Simple_repeat 1 43 0 8 653 2050 156 76 16 chrUextra 8950279 8950702 -20053954 - TART LINE telomeric -5078 9399 8952 8 653 198 0 0 0 chrUextra 8951177 8951199 -20053457 + (ATAAG)n Simple_repeat Simple_repeat 3 24 0 8 653 1344 0 0 7 chrUextra 8951200 8951349 -20053307 + Stalker3_LTR LTR Gypsy 225 372 0 8 653 3605 12 8 0 chrUextra 8951349 8951746 -20052910 + Gypsy4_I LTR Gypsy 2290 2689 -3599 8 653 1882 19 0 5 chrUextra 8951731 8951945 -20052711 + Gypsy4_I LTR Gypsy 3200 3412 -2876 8 653 1567 101 1 10 chrUextra 8952052 8952316 -20052340 + BATUMI_I LTR Pao 4315 4736 -3178 8 653 4755 2 0 0 chrUextra 8952315 8952828 -20051828 + BATUMI_I LTR Pao 4900 5412 -2551 8 653 2877 193 11 13 chrUextra 8952928 8953638 -20051018 - Jockey2 LINE Jockey -1622 1806 1419 8 653 3373 188 20 20 chrUextra 8953811 8954593 -20050063 + SAR_DM Satellite Satellite 430 1211 -261 8 653 3799 220 9 2 chrUextra 8955586 8956359 -20048297 - Gypsy2_I LTR Gypsy -203 5974 5195 8 653 1188 288 29 38 chrUextra 8957343 8957820 -20046836 + Invader1_I LTR Gypsy 2092 2564 -622 8 653 1153 147 93 4 chrUextra 8958229 8958455 -20046201 + MAX_LTR LTR Pao 76 321 0 8 653 2836 176 7 5 chrUextra 8958454 8959009 -20045647 + SAR_DM Satellite Satellite 266 821 -651 8 653 501 87 12 12 chrUextra 8959109 8959191 -20045465 - Gypsy2_I LTR Gypsy -939 5196 5115 8 653 3634 109 181 70 chrUextra 8959180 8959892 -20044764 - Gypsy2_I LTR Gypsy -1390 4745 3955 8 653 3341 193 25 25 chrUextra 8959992 8960775 -20043881 - SAR_DM Satellite Satellite -539 783 1 8 653 5598 0 2 0 chrUextra 8960875 8961481 -20043175 - BLASTOPIA_I LTR Gypsy -3874 607 1 8 653 1378 17 40 11 chrUextra 8961481 8961658 -20042998 - BLASTOPIA_LTR LTR Gypsy 0 275 94 8 653 1568 0 0 0 chrUextra 8961758 8961925 -20042731 + LSU-rRNA_Dme rRNA rRNA 1838 2004 -1896 8 653 5665 2 0 0 chrUextra 8961926 8962541 -20042115 + R2_DM LINE R2 602 1216 -2391 8 653 4894 76 52 24 chrUextra 8962641 8963424 -20041232 + STALKER4_I LTR Gypsy 707 1511 -5019 8 653 438 168 429 41 chrUextra 8963526 8963747 -20040909 - DNAREP1_DM LINE Penelope -102 492 193 8 653 368 206 88 0 chrUextra 8963782 8963884 -20040772 - DNAREP1_DM LINE Penelope -483 111 1 8 653 2484 183 10 6 chrUextra 8964407 8965190 -20039466 + SAR_DM Satellite Satellite 1 785 -558 8 653 2589 53 6 3 chrUextra 8965290 8965612 -20039044 + G5_DM LINE Jockey 1548 1870 -2986 8 653 4260 17 2 0 chrUextra 8965591 8966073 -20038583 + G5_DM LINE Jockey 2604 3086 -1770 8 653 6761 11 42 0 chrUextra 8966173 8966956 -20037700 - Gypsy4_I LTR Gypsy -1035 5253 4438 8 653 3364 144 22 10 chrUextra 8967057 8967634 -20037022 + TAHRE LINE telomeric 9867 10450 -13 8 653 789 87 5 25 chrUextra 8967682 8967839 -20036817 + HETA LINE telomeric 1 157 -10306 8 653 3650 171 17 20 chrUextra 8967939 8968720 -20035936 + SAR_DM Satellite Satellite 377 1154 -318 8 653 6423 31 4 14 chrUextra 8969705 8970488 -20034168 - BATUMI_I LTR Pao -5792 2171 1397 8 653 2401 18 4 11 chrUextra 8970592 8970873 -20033783 + BATUMI_I LTR Pao 6723 7001 -962 8 653 4122 19 2 4 chrUextra 8970899 8971371 -20033285 - BATUMI_I LTR Pao -1543 6420 5950 8 653 1621 35 155 0 chrUextra 8971471 8971697 -20032959 - ROO_I LTR Pao -5170 3086 2826 8 653 4824 11 0 32 chrUextra 8971691 8972254 -20032402 + Gypsy12_LTR LTR Gypsy 255 799 -1537 8 653 2862 198 81 23 chrUextra 8972357 8973136 -20031520 - SAR_DM Satellite Satellite -224 1248 425 8 653 3664 174 9 11 chrUextra 8973243 8974008 -20030648 - SAR_DM Satellite Satellite -514 958 195 8 653 737 95 0 0 chrUextra 8973915 8974020 -20030636 + ARS406_DM Unknown Unknown 1 105 -248 8 653 1050 25 16 0 chrUextra 8974175 8974297 -20030359 - Baggins1 LINE LOA -15 5438 5315 8 653 1825 33 124 0 chrUextra 8974293 8974534 -20030122 - Baggins1 LINE LOA -456 4997 4727 8 653 27 29 0 0 chrUextra 8974773 8974807 -20029849 + AT_rich Low_complexity Low_complexity 1 34 0 8 653 21 89 0 0 chrUextra 8975380 8975436 -20029220 + AT_rich Low_complexity Low_complexity 1 56 0 8 653 26 30 0 0 chrUextra 8975564 8975597 -20029059 + AT_rich Low_complexity Low_complexity 1 33 0 8 653 4603 26 59 1 chrUextra 8975886 8976669 -20027987 - ACCORD2_I LTR Gypsy -4463 2749 1922 8 653 1625 145 0 8 chrUextra 8976769 8977026 -20027630 + FW_DM LINE Jockey 2871 3125 -1567 8 653 2228 88 4 49 chrUextra 8977062 8977551 -20027105 - DMSAT6 Satellite Satellite -3 467 1 8 653 7240 1 0 3 chrUextra 8977652 8978435 -20026221 + LSU-rRNA_Dme rRNA rRNA 2011 2791 -1109 8 653 5010 12 16 2 chrUextra 8978535 8979098 -20025558 + DMRT1B LINE R1 3241 3811 -1372 8 653 2034 0 0 0 chrUextra 8979096 8979317 -20025339 + DMRT1B LINE R1 3766 3986 -1197 8 653 2182 4 0 4 chrUextra 8979449 8979695 -20024961 + MICROPIA_LTR LTR Gypsy 232 476 0 8 653 4615 6 2 0 chrUextra 8979695 8980199 -20024457 + MICROPIA_I LTR Gypsy 1 505 -3971 8 653 3430 188 9 11 chrUextra 8980308 8981052 -20023604 - SAR_DM Satellite Satellite -535 937 195 8 653 757 98 16 8 chrUextra 8980958 8981081 -20023575 + ARS406_DM Unknown Unknown 1 124 -229 8 653 7101 15 0 0 chrUextra 8982063 8982845 -20021811 + R2_DM LINE R2 750 1531 -2076 8 653 3259 191 19 24 chrUextra 8982945 8983727 -20020929 - SAR_DM Satellite Satellite -261 1211 434 8 653 4467 0 0 2 chrUextra 8983827 8984339 -20020317 - DM176_I LTR Gypsy -423 5997 5487 8 653 2150 8 8 0 chrUextra 8984365 8984609 -20020047 - DM176_I LTR Gypsy -926 5494 5249 8 653 3281 197 14 22 chrUextra 8984709 8985491 -20019165 - SAR_DM Satellite Satellite -258 1214 439 8 653 3332 195 19 25 chrUextra 8985591 8986373 -20018283 + SAR_DM Satellite Satellite 1 777 -216 8 653 3506 191 13 10 chrUextra 8986473 8987255 -20017401 - SAR_DM Satellite Satellite -489 983 200 8 653 6696 22 31 1 chrUextra 8987355 8988137 -20016519 + R1_DM LINE R1 3792 4596 -760 8 653 6398 35 4 11 chrUextra 8988237 8989019 -20015637 + BATUMI_I LTR Pao 1451 2226 -5737 8 653 6670 26 0 1 chrUextra 8989119 8989901 -20014755 - NINJA_I LTR Pao -3709 2302 1522 8 653 4031 30 7 2 chrUextra 8990001 8990711 -20013945 - PROTOP_A DNA P -111 994 1 8 653 620 28 0 0 chrUextra 8990711 8990783 -20013873 + DOC5_DM LINE Jockey 4573 4644 -38 8 653 3155 25 0 0 chrUextra 8990883 8991240 -20013416 - R1_DM LINE R1 -1960 3396 3040 8 653 3579 30 16 0 chrUextra 8991238 8991665 -20012991 - R1_DM LINE R1 -2587 2769 2336 8 653 2539 176 13 6 chrUextra 8992647 8993427 -20011229 - SAR_DM Satellite Satellite -648 785 1 8 653 7268 0 0 0 chrUextra 8993531 8994309 -20010347 - BARI_DM DNA Tc1 -578 1150 373 8 653 2421 196 45 4 chrUextra 8994412 8995193 -20009463 - SAR_DM Satellite Satellite -533 813 1 8 653 2118 0 0 92 chrUextra 8995293 8995565 -20009091 - LSU-rRNA_Dme rRNA rRNA -3653 247 1 8 653 21 95 0 0 chrUextra 8995577 8995640 -20009016 + AT_rich Low_complexity Low_complexity 1 63 0 8 653 23 54 0 0 chrUextra 8995853 8995890 -20008766 + AT_rich Low_complexity Low_complexity 1 37 0 8 653 228 33 33 0 chrUextra 8996175 8996205 -20008451 + ARS406_DM Unknown Unknown 159 189 -164 8 653 3402 178 19 27 chrUextra 8996182 8996955 -20007701 - SAR_DM Satellite Satellite -281 1191 425 8 653 6750 3 40 1 chrUextra 8997057 8997839 -20006817 + R1_DM LINE R1 606 1417 -3939 8 653 2384 185 13 17 chrUextra 8998821 8999986 -20004670 + DMSAT6 Satellite Satellite 1 1159 -14 8 653 2339 103 26 15 chrUextra 9000013 9000478 -20004178 + DMSAT6 Satellite Satellite 1 470 0 8 653 948 296 27 26 chrUextra 9000587 9001359 -20003297 - SAR_DM Satellite Satellite -1082 772 1 8 653 2894 194 22 17 chrUextra 9001472 9002249 -20002407 - SAR_DM Satellite Satellite -255 1217 437 8 653 6570 8 37 0 chrUextra 9002349 9003131 -20001525 - DM1731_I LTR Copia -558 3418 2608 8 653 1627 10 0 5 chrUextra 9003812 9004013 -20000643 + Gypsy5_LTR LTR Gypsy 1 200 -230 8 653 3631 68 45 28 chrUextra 9004113 9004811 -19999845 + PROTOP_A DNA P 502 1153 0 8 653 6085 1 0 1 chrUextra 9004995 9005695 -19998961 - R2_DM LINE R2 -2906 701 3 8 653 738 0 0 0 chrUextra 9005693 9005777 -19998879 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2498 8 653 6097 1 0 0 chrUextra 9005877 9006570 -19998086 - SSU-rRNA_Dme rRNA rRNA -1302 693 1 8 653 2611 203 66 14 chrUextra 9006763 9007523 -19997133 + SAR_DM Satellite Satellite 458 1256 -216 8 653 825 29 0 0 chrUextra 9007434 9007539 -19997117 - ARS406_DM Unknown Unknown -166 187 83 8 653 4670 16 0 2 chrUextra 9008523 9009080 -19995576 - LSU-rRNA_Dme rRNA rRNA -1554 2346 1791 8 653 1354 11 28 6 chrUextra 9009127 9009305 -19995351 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1607 8 653 1985 12 88 0 chrUextra 9009405 9009454 -19995202 - Stalker3_LTR LTR Gypsy -99 273 225 8 653 207 0 0 0 chrUextra 9009454 9009477 -19995179 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 653 1985 12 88 0 chrUextra 9009477 9009678 -19994978 - Stalker3_LTR LTR Gypsy -148 224 2 8 653 1957 17 4 0 chrUextra 9009678 9009914 -19994742 + R1_DM LINE R1 4830 5066 -290 8 653 943 35 0 0 chrUextra 9009911 9010025 -19994631 + R1_DM LINE R1 5243 5356 0 8 653 808 108 8 0 chrUextra 9010058 9010187 -19994469 + R1_DM LINE R1 1 130 -5226 8 653 2336 3 0 82 chrUextra 9010287 9010605 -19994051 - LSU-rRNA_Dme rRNA rRNA -3608 292 1 8 653 21 95 0 0 chrUextra 9010617 9010680 -19993976 + AT_rich Low_complexity Low_complexity 1 63 0 8 653 34 24 0 0 chrUextra 9010893 9010934 -19993722 + AT_rich Low_complexity Low_complexity 1 41 0 8 653 5921 9 124 1 chrUextra 9011169 9011951 -19992705 - Gypsy4_I LTR Gypsy -596 5692 4815 8 653 484 111 0 0 chrUextra 9012054 9012135 -19992521 + ARS406_DM Unknown Unknown 1 81 -272 8 653 1304 147 8 4 chrUextra 9012144 9012397 -19992259 - SAR_DM Satellite Satellite -847 625 372 8 653 1955 172 7 7 chrUextra 9012408 9012830 -19991826 - SAR_DM Satellite Satellite -447 1025 604 8 653 4388 91 133 1 chrUextra 9012961 9013677 -19990979 - R1_DM LINE R1 -9 5347 4538 8 653 1795 5 0 0 chrUextra 9013815 9014036 -19990620 + DOC LINE Jockey 4502 4722 -3 8 653 4152 52 42 8 chrUextra 9014002 9014597 -19990059 + TART LINE telomeric 9658 10272 -4205 8 653 2236 22 0 0 chrUextra 9014697 9014966 -19989690 - CIRCE LINE Composite -6087 269 1 8 653 4300 21 0 0 chrUextra 9014966 9015479 -19989177 - CIRCE LINE Composite 0 6356 5844 8 653 3310 185 6 10 chrUextra 9015579 9016359 -19988297 - SAR_DM Satellite Satellite -484 988 212 8 653 6615 11 0 0 chrUextra 9016461 9017243 -19987413 - G2_DM LINE Jockey -2098 1004 223 8 653 5097 2 2 0 chrUextra 9017343 9017931 -19986725 + LSU-rRNA_Dme rRNA rRNA 1967 2555 -1345 8 653 1496 0 0 0 chrUextra 9017954 9018125 -19986531 + R2_DM LINE R2 3427 3597 -10 8 653 21 57 0 0 chrUextra 9018423 9018458 -19986198 + AT_rich Low_complexity Low_complexity 1 35 0 8 653 2403 18 99 0 chrUextra 9018504 9019007 -19985649 - PROTOP_A DNA P -117 988 436 8 653 2299 121 14 12 chrUextra 9019119 9019889 -19984767 - DMSAT6 Satellite Satellite -3 772 1 8 653 728 317 18 18 chrUextra 9020039 9020597 -19984059 + Gypsy4_I LTR Gypsy 2431 3335 -4187 8 653 1510 23 19 0 chrUextra 9020431 9020645 -19984011 + TLD2 Unknown Unknown 1 218 0 8 653 323 265 4 12 chrUextra 9020655 9020770 -19983886 + GTWIN_I LTR Gypsy 3323 3424 -2997 8 653 3430 65 0 18 chrUextra 9020871 9021375 -19983281 + TART LINE telomeric 715 1209 -13268 8 653 490 33 0 0 chrUextra 9021375 9021436 -19983220 + PROTOP_B DNA P 1 61 -1092 8 653 882 17 8 55 chrUextra 9021430 9021557 -19983099 - NINJA_LTR LTR Pao -196 121 1 8 653 774 42 0 0 chrUextra 9021557 9021653 -19983003 - NINJA_I LTR Pao 0 6011 5916 8 653 6215 32 22 0 chrUextra 9022636 9023417 -19981239 + R1_DM LINE R1 2455 3252 -2104 8 653 3837 27 32 16 chrUextra 9023517 9024299 -19980357 + ROO_I LTR Pao 1686 2526 -5730 8 653 21 89 0 0 chrUextra 9024410 9024466 -19980190 + AT_rich Low_complexity Low_complexity 1 56 0 8 653 29 60 0 0 chrUextra 9024504 9024554 -19980102 + AT_rich Low_complexity Low_complexity 1 50 0 8 653 33 25 0 0 chrUextra 9024587 9024627 -19980029 + AT_rich Low_complexity Low_complexity 1 40 0 8 653 1504 41 0 10 chrUextra 9024986 9025181 -19979475 - PROTOP DNA P 0 4480 4288 8 653 6340 23 1 0 chrUextra 9025281 9026063 -19978593 - NINJA_I LTR Pao -1628 4383 3601 8 653 2343 86 8 35 chrUextra 9026163 9026945 -19977711 - DMSAT6 Satellite Satellite -67 760 1 8 653 5528 55 22 4 chrUextra 9027046 9027827 -19976829 - IDEFIX_I LTR Gypsy -1544 4084 3290 8 653 1500 141 15 11 chrUextra 9027927 9028199 -19976457 + Gypsy12_I LTR Gypsy 5274 5546 0 8 653 1359 131 5 0 chrUextra 9028199 9028421 -19976235 + Gypsy12A_LTR LTR Gypsy 1 223 -2057 8 653 22 80 0 0 chrUextra 9028486 9028536 -19976120 + AT_rich Low_complexity Low_complexity 1 50 0 8 653 24 53 0 0 chrUextra 9028591 9028629 -19976027 + AT_rich Low_complexity Low_complexity 1 38 0 8 653 416 104 15 0 chrUextra 9028642 9028709 -19975947 - DOC LINE Jockey -1130 3595 3528 8 653 1003 307 25 25 chrUextra 9028827 9029589 -19975067 + Gypsy_I LTR Gypsy 1801 2655 -3852 8 653 2987 180 19 28 chrUextra 9029691 9030473 -19974183 - SAR_DM Satellite Satellite -1023 774 1 8 653 1620 0 0 0 chrUextra 9030573 9030875 -19973781 + (GAGAA)n Simple_repeat Simple_repeat 1 302 0 8 653 192 40 0 0 chrUextra 9031551 9031576 -19973080 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 653 511 193 16 16 chrUextra 9031576 9031697 -19972959 + HETRP_DM Satellite Satellite 1549 1669 -203 8 653 626 192 6 62 chrUextra 9031841 9032002 -19972654 + HETRP_DM Satellite Satellite 1518 1669 -203 8 653 422 184 20 10 chrUextra 9032138 9032237 -19972419 + HETRP_DM Satellite Satellite 1529 1628 -244 8 653 897 39 533 0 chrUextra 9032337 9032487 -19972169 - PROTOP_A DNA P -875 230 1 8 653 577 112 169 15 chrUextra 9033300 9033436 -19971220 + DNAREP1_DM LINE Penelope 226 382 -212 8 653 1698 76 104 11 chrUextra 9033443 9033722 -19970934 + DNAREP1_DM LINE Penelope 290 594 0 8 653 23 0 0 0 chrUextra 9033978 9034001 -19970655 + AT_rich Low_complexity Low_complexity 1 23 0 8 653 6012 1 1 62 chrUextra 9034101 9034882 -19969774 + LSU-rRNA_Dme rRNA rRNA 1723 2456 -1444 8 653 2870 28 0 0 chrUextra 9034982 9035338 -19969318 + STALKER4_I LTR Gypsy 2010 2365 -4165 8 653 2685 92 52 0 chrUextra 9035336 9035762 -19968894 - IDEFIX_I LTR Gypsy -874 4754 4307 8 653 1206 40 0 0 chrUextra 9035894 9036043 -19968613 + DMCR1A LINE CR1 1584 1732 -2738 8 653 4577 39 0 15 chrUextra 9036043 9036644 -19968012 + DMCR1A LINE CR1 1983 2574 -1896 8 653 207 0 0 0 chrUextra 9037387 9037410 -19967246 + (A)n Simple_repeat Simple_repeat 1 23 0 8 653 1609 20 120 0 chrUextra 9037625 9037875 -19966781 + STALKER4_I LTR Gypsy 6251 6530 0 8 653 3177 51 2 14 chrUextra 9037875 9038314 -19966342 + STALKER4_LTR LTR Gypsy 1 392 -10 8 653 519 12 0 46 chrUextra 9038318 9038405 -19966251 - DMSAT6 Satellite Satellite -66 404 322 8 653 3242 190 21 8 chrUextra 9038506 9039280 -19965376 - SAR_DM Satellite Satellite -443 1029 246 8 653 231 149 0 0 chrUextra 9039240 9039287 -19965369 + ARS406_DM Unknown Unknown 1 47 -306 8 653 1620 25 2 12 chrUextra 9039387 9039891 -19964765 + (TTATA)n Simple_repeat Simple_repeat 1 498 0 8 653 2153 40 4 0 chrUextra 9039891 9040168 -19964488 + DM1731_LTR LTR Copia 2 279 -57 8 653 4265 61 47 21 chrUextra 9040268 9040886 -19963770 - G5A_DM LINE Jockey -905 1936 1303 8 653 1157 43 142 0 chrUextra 9040887 9041049 -19963607 - G5A_DM LINE Jockey -1691 1150 966 8 653 524 283 25 21 chrUextra 9041151 9041386 -19963270 - MICROPIA_I LTR Gypsy -2881 1595 1360 8 653 333 315 36 36 chrUextra 9041534 9041811 -19962845 - Invader1_I LTR Gypsy -1960 1226 950 8 653 3554 104 122 21 chrUextra 9042107 9042811 -19961845 + TART LINE telomeric 6734 7508 -6969 8 653 27 29 0 0 chrUextra 9043269 9043303 -19961353 + AT_rich Low_complexity Low_complexity 1 34 0 8 653 1030 20 196 0 chrUextra 9043542 9043690 -19960966 + Baggins1 LINE LOA 4727 4903 -550 8 81 6522 20 0 0 chrUextra 9043792 9044573 -19960083 + FW_DM LINE Jockey 688 1468 -3224 8 654 2166 84 50 29 chrUextra 9045012 9045454 -19959202 + DMSAT6 Satellite Satellite 17 467 -3 8 654 2009 13 0 0 chrUextra 9045554 9045787 -19958869 + LSU-rRNA_Dme rRNA rRNA 2420 2652 -1248 8 654 4671 5 2 2 chrUextra 9045779 9046335 -19958321 + R1_DM LINE R1 3551 4106 -1250 8 654 1771 79 0 31 chrUextra 9046435 9046720 -19957936 + TART_B1 LINE telomeric 5412 5687 -4967 8 654 490 33 0 0 chrUextra 9046720 9046781 -19957875 + PROTOP_B DNA P 1 61 -1092 8 654 882 17 8 55 chrUextra 9046775 9046902 -19957754 - NINJA_LTR LTR Pao -196 121 1 8 654 2462 32 6 0 chrUextra 9046902 9047216 -19957440 - NINJA_I LTR Pao 0 6011 5696 8 654 318 202 0 21 chrUextra 9047319 9047415 -19957241 + XDMR_DM Unknown Unknown 267 360 0 8 654 2599 185 5 20 chrUextra 9047329 9047963 -19956693 - SAR_DM Satellite Satellite -353 1119 496 8 654 657 53 53 0 chrUextra 9047968 9048063 -19956593 + ARS406_DM Unknown Unknown 90 189 -164 8 654 537 154 42 17 chrUextra 9047978 9048097 -19956559 - SAR_DM Satellite Satellite -569 903 782 8 654 6699 6 1 0 chrUextra 9048197 9048978 -19955678 - G2_DM LINE Jockey -2098 1004 223 8 654 419 119 0 0 chrUextra 9049197 9049264 -19955392 - Gypsy8_LTR LTR Gypsy -237 67 1 8 654 1027 79 6 41 chrUextra 9049266 9049437 -19955219 - Invader2_I LTR Gypsy -567 4025 3861 8 654 1380 98 34 11 chrUextra 9049451 9049753 -19954903 - Invader2_I LTR Gypsy -799 3793 3419 8 654 701 66 28 0 chrUextra 9049753 9049859 -19954797 + IDEFIX_LTR LTR Gypsy 1 109 -485 8 654 623 27 0 0 chrUextra 9049959 9050034 -19954622 - R1_DM LINE R1 -39 5317 5243 8 654 5757 21 16 0 chrUextra 9050031 9050740 -19953916 - R1_DM LINE R1 -290 5066 4347 8 654 1620 5 0 0 chrUextra 9050840 9051062 -19953594 + (TATAA)n Simple_repeat Simple_repeat 1 222 0 8 654 2765 6 0 0 chrUextra 9051066 9051387 -19953269 + MAX_LTR LTR Pao 1 321 0 8 654 2017 8 0 0 chrUextra 9051387 9051621 -19953035 + MAX_I LTR Pao 1 234 -7680 8 654 1910 14 0 0 chrUextra 9051721 9051944 -19952712 + ROO_LTR LTR Pao 206 428 0 8 654 1477 22 0 0 chrUextra 9052602 9052783 -19951873 + G2_DM LINE Jockey 912 1092 -2010 8 654 2667 21 0 6 chrUextra 9052779 9053107 -19951549 - G_DM LINE Jockey -1368 2978 2653 8 654 246 150 0 0 chrUextra 9053157 9053197 -19951459 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 837 27 9 26 chrUextra 9053267 9053383 -19951273 + NTS_DM Other Other 25 138 -102 8 654 6010 31 5 11 chrUextra 9053483 9054264 -19950392 - BATUMI_I LTR Pao -5568 2395 1620 8 654 6815 3 0 0 chrUextra 9054366 9055145 -19949511 - R2_DM LINE R2 -910 2697 1919 8 654 6835 1 0 0 chrUextra 9055245 9056026 -19948630 + BURDOCK_I LTR Gypsy 3011 3791 -2069 8 654 1578 9 0 0 chrUextra 9057007 9057221 -19947435 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 8 654 430 286 19 19 chrUextra 9057223 9057380 -19947276 + BS2 LINE Jockey 1255 1411 -3310 8 654 1237 192 68 12 chrUextra 9057466 9057788 -19946868 + BS2 LINE Jockey 1536 1875 -2846 8 654 2238 7 0 84 chrUextra 9057888 9058199 -19946457 - LSU-rRNA_Dme rRNA rRNA -3615 285 1 8 654 34 24 0 0 chrUextra 9058487 9058528 -19946128 + AT_rich Low_complexity Low_complexity 1 41 0 8 654 5325 96 13 0 chrUextra 9058769 9059550 -19945106 + HETA LINE telomeric 2135 2925 -3156 8 654 3232 186 10 9 chrUextra 9059651 9060431 -19944225 + SAR_DM Satellite Satellite 237 1017 -455 8 654 2655 6 3 0 chrUextra 9060531 9060867 -19943789 - Invader2_I LTR Gypsy -4255 337 1 8 654 2260 15 0 0 chrUextra 9060867 9061133 -19943523 - Invader2_LTR LTR Gypsy 0 266 1 8 654 1304 6 0 34 chrUextra 9061133 9061312 -19943344 - Invader2_I LTR Gypsy 0 4592 4420 8 654 5825 23 1 27 chrUextra 9061441 9062185 -19942471 - Gypsy12_LTR LTR Gypsy -1611 725 1 8 654 2282 4 0 4 chrUextra 9062293 9062568 -19942088 + Copia_I LTR Copia 24 297 -4296 8 654 3533 52 0 0 chrUextra 9063174 9063635 -19941021 - BS2 LINE Jockey -129 4592 4132 8 654 835 280 64 0 chrUextra 9063691 9063955 -19940701 + BS2 LINE Jockey 788 1068 -3653 8 654 2386 98 40 16 chrUextra 9064055 9064836 -19939820 + DMSAT6 Satellite Satellite 1 800 -97 8 654 383 323 48 38 chrUextra 9065274 9065567 -19939089 + MICROPIA_I LTR Gypsy 1 296 -4180 8 654 707 118 4 45 chrUextra 9065568 9065717 -19938939 - STALKER4_LTR LTR Gypsy -3 399 249 8 654 1554 17 0 0 chrUextra 9065817 9066115 -19938541 + (TTATA)n Simple_repeat Simple_repeat 1 298 0 8 654 744 47 0 0 chrUextra 9066115 9066222 -19938434 + G2_DM LINE Jockey 2989 3095 -7 8 654 3079 32 3 0 chrUextra 9066221 9066598 -19938058 - LSU-rRNA_Dme rRNA rRNA -474 3426 3049 8 654 3141 182 43 10 chrUextra 9066703 9067478 -19937178 + SAR_DM Satellite Satellite 195 994 -478 8 654 840 20 0 10 chrUextra 9067579 9067682 -19936974 + PROTOP_B DNA P 1054 1153 0 8 654 2920 89 72 105 chrUextra 9067682 9068360 -19936296 + PROTOP_B DNA P 420 1075 -78 8 654 6309 28 3 0 chrUextra 9068460 9069241 -19935415 + R1_DM LINE R1 2471 3253 -2103 8 654 983 332 9 17 chrUextra 9069352 9069877 -19934779 + MICROPIA_I LTR Gypsy 3354 3850 -626 8 654 2856 189 22 33 chrUextra 9070232 9071002 -19933654 - SAR_DM Satellite Satellite -577 761 1 8 654 40 21 0 0 chrUextra 9071820 9071867 -19932789 + AT_rich Low_complexity Low_complexity 1 47 0 8 654 763 59 17 0 chrUextra 9072217 9072335 -19932321 + (CAATA)n Simple_repeat Simple_repeat 5 124 0 8 654 2470 0 0 3 chrUextra 9072335 9072632 -19932024 - FW_DM LINE Jockey -1 4691 4396 8 654 2216 107 9 55 chrUextra 9072891 9073641 -19931015 - DMSAT6 Satellite Satellite 0 716 1 8 654 1915 174 21 5 chrUextra 9073746 9074168 -19930488 - SAR_DM Satellite Satellite -588 884 456 8 654 1417 186 24 3 chrUextra 9074188 9074527 -19930129 - SAR_DM Satellite Satellite -566 906 561 8 654 530 37 0 123 chrUextra 9074627 9074814 -19929842 + T-rich Low_complexity Low_complexity 3 166 0 8 654 1243 75 0 5 chrUextra 9075508 9075696 -19928960 + ARS406_DM Unknown Unknown 3 189 -164 8 654 1038 178 12 12 chrUextra 9075696 9075752 -19928904 - SAR_DM Satellite Satellite -830 642 399 8 654 370 57 19 0 chrUextra 9075768 9075821 -19928835 + ARS406_DM Unknown Unknown 136 189 -164 8 654 2339 164 16 8 chrUextra 9075777 9076286 -19928370 - SAR_DM Satellite Satellite -614 858 346 8 654 5425 85 3 4 chrUextra 9076393 9077169 -19927487 + HETA LINE telomeric 1916 2690 -3391 8 654 256 128 0 0 chrUextra 9077270 9077317 -19927339 - ARS406_DM Unknown Unknown -306 47 1 8 654 2660 173 56 11 chrUextra 9077277 9077907 -19926749 + SAR_DM Satellite Satellite 246 903 -569 8 654 846 81 7 0 chrUextra 9077914 9078050 -19926606 - ARS406_DM Unknown Unknown -195 158 22 8 654 3360 179 7 8 chrUextra 9078151 9078921 -19925735 - SAR_DM Satellite Satellite -480 992 224 8 654 442 99 0 0 chrUextra 9078859 9078930 -19925726 + ARS406_DM Unknown Unknown 1 71 -282 8 654 309 51 0 0 chrUextra 9079469 9079508 -19925148 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 654 3256 119 42 87 chrUextra 9082556 9083337 -19921319 - PROTOP_B DNA P -92 1061 316 8 654 2025 0 0 0 chrUextra 9083901 9084141 -19920515 - ALUII_DM Unknown Unknown 0 240 1 8 654 21 57 0 0 chrUextra 9084141 9084176 -19920480 + AT_rich Low_complexity Low_complexity 1 35 0 8 654 2889 28 3 0 chrUextra 9084319 9084683 -19919973 - NINJA_I LTR Pao -1648 4363 3999 8 654 3428 28 0 9 chrUextra 9084660 9085099 -19919557 - NINJA_I LTR Pao -3164 2847 2413 8 654 3407 179 14 7 chrUextra 9085202 9085973 -19918683 + SAR_DM Satellite Satellite 282 1058 -414 8 654 2898 63 5 17 chrUextra 9086296 9086702 -19917954 + Baggins1 LINE LOA 4791 5191 -262 8 654 3952 2 0 0 chrUextra 9086961 9087419 -19917237 - QUASIMODO_LTR LTR Gypsy -96 562 105 8 654 586 6 125 3 chrUextra 9087420 9087741 -19916915 + (TA)n Simple_repeat Simple_repeat 1 360 0 8 654 5286 16 0 0 chrUextra 9087842 9088467 -19916189 - BS2 LINE Jockey -4016 705 81 8 654 479 0 146 0 chrUextra 9088472 9088623 -19916033 + (TA)n Simple_repeat Simple_repeat 1 173 0 8 654 5057 92 1 1 chrUextra 9088723 9089504 -19915152 - BATUMI_I LTR Pao -3366 4548 3692 8 654 2396 214 61 18 chrUextra 9089607 9090383 -19914273 + SAR_DM Satellite Satellite 1 809 -208 8 654 6316 18 1 3 chrUextra 9090485 9091266 -19913390 - G_DM LINE Jockey -1563 2783 2004 8 654 6592 1 35 0 chrUextra 9091366 9092147 -19912509 - Invader4_I LTR Gypsy -426 1987 1180 8 654 2926 180 9 11 chrUextra 9092255 9093028 -19911628 - SAR_DM Satellite Satellite -396 771 1 8 654 6587 15 0 0 chrUextra 9093128 9093909 -19910747 + DOC2_DM LINE Jockey 3828 4608 -185 8 654 2206 29 0 0 chrUextra 9094009 9094281 -19910375 - DM1731_LTR LTR Copia -64 272 1 8 654 2205 191 6 6 chrUextra 9094280 9094790 -19909866 - SAR_DM Satellite Satellite -707 765 256 8 654 719 325 22 23 chrUextra 9095185 9095670 -19908986 - MICROPIA_I LTR Gypsy -3389 710 229 8 654 458 233 81 0 chrUextra 9095772 9095944 -19908712 - DNAREP1_DM LINE Penelope -407 187 2 8 654 292 120 100 0 chrUextra 9096222 9096272 -19908384 + DNAREP1_DM LINE Penelope 408 462 -132 8 654 1182 55 0 0 chrUextra 9096389 9096552 -19908104 + (GAGAA)n Simple_repeat Simple_repeat 2 164 0 8 654 4128 119 154 8 chrUextra 9096652 9097433 -19907223 + TAHRE LINE telomeric 716 1610 -8853 8 654 3622 52 42 0 chrUextra 9097702 9098310 -19906346 - PROTOP_A DNA P 0 1105 570 8 654 6671 10 0 0 chrUextra 9098414 9099195 -19905461 - Gypsy4_I LTR Gypsy -3638 2650 1870 8 654 575 125 0 0 chrUextra 9099295 9099383 -19905273 - Baggins1 LINE LOA -604 4849 4762 8 654 893 180 80 90 chrUextra 9099704 9100016 -19904640 - TIRANT_LTR LTR Gypsy -108 309 1 8 654 2628 82 181 3 chrUextra 9100175 9100743 -19903913 - TART_B1 LINE telomeric -7587 3067 2399 8 654 1707 33 0 5 chrUextra 9100743 9100955 -19903701 - PROTOP_A DNA P 0 1105 895 8 654 5567 43 60 24 chrUextra 9101055 9101835 -19902821 - DMCR1A LINE CR1 -1464 3006 2199 8 654 4958 0 0 0 chrUextra 9101935 9102517 -19902139 - STALKER4_I LTR Gypsy -782 5748 5167 8 654 268 55 309 0 chrUextra 9102518 9102573 -19902083 - Stalker2_I LTR Gypsy -7089 313 242 8 654 6006 36 6 4 chrUextra 9102815 9103595 -19901061 - DMRT1B LINE R1 -167 5016 4235 8 654 3320 20 12 0 chrUextra 9103697 9104105 -19900551 + FW_DM LINE Jockey 4018 4430 -262 8 654 1411 25 56 0 chrUextra 9104121 9104317 -19900339 + FW_DM LINE Jockey 4486 4692 0 8 654 254 29 0 0 chrUextra 9104323 9104357 -19900299 - R1_DM LINE R1 -3966 1390 1357 8 654 904 26 8 8 chrUextra 9104357 9104475 -19900181 - R1_DM LINE R1 -4150 1206 1089 8 654 888 97 8 16 chrUextra 9104575 9105355 -19899301 + RSP Satellite Satellite 1 773 0 8 654 4987 109 5 1 chrUextra 9105455 9106235 -19898421 - S_DM DNA Tc1 -185 1551 769 8 654 6661 0 1 0 chrUextra 9106335 9107115 -19897541 + DOC LINE Jockey 1454 2234 -2491 8 654 3341 182 9 10 chrUextra 9107216 9107995 -19896661 - SAR_DM Satellite Satellite -439 1033 256 8 654 464 146 73 0 chrUextra 9108985 9109081 -19895575 + DMCR1A LINE CR1 2303 2405 -2065 8 654 684 250 107 11 chrUextra 9109140 9109411 -19895245 - BS LINE Jockey -1688 3438 3142 8 654 261 301 0 0 chrUextra 9109661 9109754 -19894902 - BS LINE Jockey -2328 2798 2706 8 654 1523 6 0 0 chrUextra 9109855 9110032 -19894624 - Copia2_I LTR Copia -869 3293 3117 8 654 22 35 0 0 chrUextra 9110066 9110095 -19894561 + AT_rich Low_complexity Low_complexity 1 29 0 8 654 58 15 0 0 chrUextra 9110270 9110335 -19894321 + AT_rich Low_complexity Low_complexity 1 65 0 8 654 426 176 32 48 chrUextra 9111383 9111508 -19893148 - Stalker2_I LTR Gypsy -6520 882 760 8 654 46 0 0 0 chrUextra 9112247 9112293 -19892363 + AT_rich Low_complexity Low_complexity 1 46 0 8 654 6972 5 8 0 chrUextra 9112495 9113275 -19891381 + Copia2_I LTR Copia 403 1188 -2974 8 654 3238 180 16 19 chrUextra 9113375 9114155 -19890501 + SAR_DM Satellite Satellite 1 777 -242 8 654 22 0 0 0 chrUextra 9115013 9115035 -19889621 + AT_rich Low_complexity Low_complexity 1 22 0 8 654 2540 177 9 9 chrUextra 9115135 9115915 -19888741 + SAR_DM Satellite Satellite 1 780 -558 8 654 3327 172 21 29 chrUextra 9116016 9116789 -19887867 + SAR_DM Satellite Satellite 425 1191 -281 8 654 250 33 0 0 chrUextra 9116765 9116795 -19887861 - ARS406_DM Unknown Unknown -164 189 160 8 654 3079 184 57 26 chrUextra 9116895 9117663 -19886993 + SAR_DM Satellite Satellite 1 791 -203 8 654 726 78 0 0 chrUextra 9117573 9117675 -19886981 - ARS406_DM Unknown Unknown -164 189 88 8 654 368 303 14 43 chrUextra 9118188 9118395 -19886261 - BLASTOPIA_I LTR Gypsy -740 3741 3541 8 654 1332 25 0 0 chrUextra 9118655 9118814 -19885842 - DM297_I LTR Gypsy -6008 159 1 8 654 3523 5 7 7 chrUextra 9118814 9119228 -19885428 - DM297_LTR LTR Gypsy 0 414 1 8 654 1143 175 30 12 chrUextra 9119557 9120060 -19884596 + SAR_DM Satellite Satellite 1 511 -680 8 654 1097 161 37 8 chrUextra 9120071 9120315 -19884341 + SAR_DM Satellite Satellite 539 789 -683 8 654 2283 204 45 9 chrUextra 9120416 9121195 -19883461 + SAR_DM Satellite Satellite 1 806 -666 8 654 3269 45 0 2 chrUextra 9121324 9121724 -19882932 - STALKER4_LTR LTR Gypsy -3 399 1 8 654 3037 23 0 0 chrUextra 9121724 9122075 -19882581 + FW_DM LINE Jockey 3240 3590 -1102 8 654 4276 38 0 0 chrUextra 9122175 9122701 -19881955 + PROTOP_A DNA P 580 1105 0 8 654 657 298 4 0 chrUextra 9122713 9122955 -19881701 - ROVER-I_DM LTR Gypsy -5050 1534 1292 8 654 3891 174 5 6 chrUextra 9123058 9123835 -19880821 - SAR_DM Satellite Satellite -435 1037 262 8 654 1209 0 0 0 chrUextra 9123935 9124073 -19880583 + QUASIMODO_LTR LTR Gypsy 521 658 0 8 654 5488 3 5 22 chrUextra 9124073 9124715 -19879941 + QUASIMODO_I LTR Gypsy 1 631 -5429 8 654 3570 175 12 12 chrUextra 9124815 9125585 -19879071 - SAR_DM Satellite Satellite -455 1017 248 8 654 281 243 0 0 chrUextra 9125524 9125594 -19879062 + XDMR_DM Unknown Unknown 18 87 -273 8 654 2296 255 2 2 chrUextra 9125914 9126475 -19878181 + HMSBEAGLE_I LTR Gypsy 3100 3660 -2869 8 654 993 0 0 78 chrUextra 9126578 9126770 -19877886 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 8 654 5074 7 2 0 chrUextra 9126783 9127355 -19877301 + DMRT1B LINE R1 1328 1900 -3283 8 654 604 318 27 36 chrUextra 9127455 9127820 -19876836 - MICROPIA_I LTR Gypsy -2143 2333 1972 8 654 3084 6 0 0 chrUextra 9127883 9128232 -19876424 + QUASIMODO_LTR LTR Gypsy 124 472 -186 8 654 6493 10 58 3 chrUextra 9128335 9129115 -19875541 - DM176_I LTR Gypsy -2054 4366 3544 8 654 6784 16 0 5 chrUextra 9129215 9129995 -19874661 + FW_DM LINE Jockey 3541 4316 -376 8 654 6881 9 9 1 chrUextra 9130095 9130875 -19873781 + Gypsy4_I LTR Gypsy 1478 2263 -4025 8 654 6918 1 0 1 chrUextra 9131855 9132635 -19872021 - ROO_I LTR Pao -5870 2386 1608 8 654 372 280 111 93 chrUextra 9132746 9133026 -19871630 + Invader1_LTR LTR Gypsy 84 368 -55 8 654 325 246 43 17 chrUextra 9134258 9134374 -19870282 + STALKER4_I LTR Gypsy 2111 2229 -4301 8 654 3461 172 19 26 chrUextra 9134495 9135275 -19869381 - SAR_DM Satellite Satellite -308 1164 390 8 654 1587 5 0 0 chrUextra 9135379 9135602 -19869054 + (TTATA)n Simple_repeat Simple_repeat 1 223 0 8 654 2788 39 0 0 chrUextra 9135602 9135938 -19868718 - DM1731_LTR LTR Copia 0 336 1 8 654 1839 5 0 23 chrUextra 9135938 9136155 -19868501 - DM1731_I LTR Copia 0 3976 3765 8 654 1760 34 0 0 chrUextra 9136457 9136694 -19867962 - QUASIMODO_I LTR Gypsy -333 5727 5491 8 654 1027 68 34 0 chrUextra 9136703 9136850 -19867806 - QUASIMODO_I LTR Gypsy -885 5175 5024 8 654 1658 0 0 0 chrUextra 9136850 9137035 -19867621 - Copia2_LTR_DM LTR Copia 0 198 14 8 654 3918 9 47 0 chrUextra 9137135 9137811 -19866845 + PROTOP_A DNA P 398 1105 0 8 654 684 48 0 9 chrUextra 9137811 9137915 -19866741 - ZAM_I LTR Gypsy -1762 5728 5626 8 654 2523 7 7 0 chrUextra 9138015 9138323 -19866333 + DOC LINE Jockey 4414 4723 -2 8 654 3179 196 26 27 chrUextra 9138895 9139671 -19864985 - HETA LINE telomeric -1643 4438 3664 8 654 6316 28 5 3 chrUextra 9139775 9140555 -19864101 - PROTOP_A DNA P -5 1100 319 8 654 376 138 0 0 chrUextra 9140655 9140713 -19863943 + ARS406_DM Unknown Unknown 130 187 -166 8 654 3099 194 30 27 chrUextra 9140665 9141435 -19863221 - SAR_DM Satellite Satellite -255 1217 446 8 654 34 24 0 0 chrUextra 9141891 9141932 -19862724 + AT_rich Low_complexity Low_complexity 1 41 0 8 654 696 122 0 65 chrUextra 9142159 9142282 -19862374 - Gypsy6A_LTR LTR Gypsy -118 302 188 8 654 3670 163 10 19 chrUextra 9142415 9143195 -19861461 + SAR_DM Satellite Satellite 253 1025 -447 8 654 271 56 0 0 chrUextra 9143295 9143331 -19861325 - ARS406_DM Unknown Unknown -227 126 91 8 654 3507 173 10 7 chrUextra 9143344 9144073 -19860583 + SAR_DM Satellite Satellite 326 1056 -416 8 654 6949 9 1 1 chrUextra 9144175 9144955 -19859701 - R2_DM LINE R2 -473 3134 2355 8 654 3698 38 0 0 chrUextra 9145055 9145507 -19859149 - IDEFIX_I LTR Gypsy -5176 452 1 8 654 25 0 0 0 chrUextra 9145799 9145824 -19858832 + AT_rich Low_complexity Low_complexity 1 25 0 8 654 6714 19 0 0 chrUextra 9145935 9146715 -19857941 + ROO_I LTR Pao 5559 6338 -1918 8 654 1289 0 23 17 chrUextra 9146815 9146988 -19857668 + NTS_DM Other Other 67 240 0 8 654 1940 0 17 13 chrUextra 9146988 9147227 -19857429 + NTS_DM Other Other 1 240 0 8 654 1915 8 17 13 chrUextra 9147227 9147466 -19857190 + NTS_DM Other Other 1 240 0 8 654 1159 0 0 0 chrUextra 9147466 9147595 -19857061 + NTS_DM Other Other 1 129 -111 8 654 356 265 114 96 chrUextra 9147711 9147991 -19856665 - Invader1_LTR LTR Gypsy -55 368 84 8 654 982 168 102 15 chrUextra 9148200 9148405 -19856251 + DMLTR5 LTR Gypsy 44 266 0 8 654 369 111 32 0 chrUextra 9148404 9148467 -19856189 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 8 654 6527 26 37 1 chrUextra 9148575 9149355 -19855301 + R1_DM LINE R1 4072 4879 -477 8 654 3030 3 3 0 chrUextra 9149455 9149814 -19854842 - ROO_I LTR Pao -3301 4955 4596 8 654 522 119 0 0 chrUextra 9149814 9149898 -19854758 + (CTG)n Simple_repeat Simple_repeat 1 84 0 8 654 2803 9 23 6 chrUextra 9149898 9150235 -19854421 - ROO_I LTR Pao -7616 640 296 8 654 5543 62 35 1 chrUextra 9150335 9151114 -19853542 + STALKER4_I LTR Gypsy 2551 3355 -3175 8 654 2016 238 46 9 chrUextra 9151281 9151829 -19852827 + BS LINE Jockey 2231 2798 -2328 8 654 5608 2 2 0 chrUextra 9152095 9152712 -19851944 - LSU-rRNA_Dme rRNA rRNA -643 3257 2640 8 654 1398 7 0 0 chrUextra 9152710 9152864 -19851792 - R1_DM LINE R1 0 5356 5203 8 654 5961 25 116 0 chrUextra 9152976 9153755 -19850901 + Copia2_I LTR Copia 1118 1986 -2176 8 654 1148 144 64 5 chrUextra 9154094 9154297 -19850359 + DNAREP1_DM LINE Penelope 22 236 -358 8 654 212 0 0 35 chrUextra 9154348 9154377 -19850279 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 654 1167 64 13 6 chrUextra 9154735 9154893 -19849763 + G5_DM LINE Jockey 1712 1870 -2986 8 654 5544 25 0 2 chrUextra 9154872 9155515 -19849141 + G5_DM LINE Jockey 2604 3245 -1611 8 654 23 33 0 0 chrUextra 9156027 9156057 -19848599 + AT_rich Low_complexity Low_complexity 1 30 0 8 654 1658 19 29 0 chrUextra 9156495 9156700 -19847956 + IDEFIX_LTR LTR Gypsy 106 316 -278 8 654 21 0 0 0 chrUextra 9156700 9156721 -19847935 + AT_rich Low_complexity Low_complexity 1 21 0 8 654 2837 32 3 6 chrUextra 9156723 9157073 -19847583 - CIRCE LINE Composite -1027 5329 4981 8 654 3417 0 0 0 chrUextra 9157375 9157748 -19846908 + LSU-rRNA_Dme rRNA rRNA 3528 3900 0 8 654 22 56 0 0 chrUextra 9157820 9157856 -19846800 + AT_rich Low_complexity Low_complexity 1 36 0 8 654 262 150 0 0 chrUextra 9157861 9157901 -19846755 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 262 150 0 0 chrUextra 9157953 9157993 -19846663 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 262 150 0 0 chrUextra 9158045 9158085 -19846571 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 636 20 39 39 chrUextra 9158255 9158357 -19846299 + NTS_DM Other Other 139 240 0 8 654 1813 21 17 17 chrUextra 9158357 9158597 -19846059 + NTS_DM Other Other 1 240 0 8 654 1177 8 0 0 chrUextra 9158597 9158730 -19845926 + NTS_DM Other Other 1 133 -107 8 654 1304 18 0 6 chrUextra 9158730 9158895 -19845761 + NTS_DM Other Other 38 201 -39 8 654 21 57 0 0 chrUextra 9158895 9158930 -19845726 + AT_rich Low_complexity Low_complexity 1 35 0 8 654 569 13 26 39 chrUextra 9158957 9159035 -19845621 + NTS_DM Other Other 25 101 -139 8 654 3891 107 70 4 chrUextra 9159140 9159915 -19844741 - Gypsy12_I LTR Gypsy -1345 4201 3376 8 654 6826 18 0 0 chrUextra 9160895 9161674 -19842982 + R1_DM LINE R1 3987 4765 -591 8 654 3320 189 14 21 chrUextra 9161774 9162552 -19842104 + SAR_DM Satellite Satellite 419 1191 -281 8 654 868 0 0 19 chrUextra 9162653 9162760 -19841896 - QUASIMODO_LTR LTR Gypsy -553 105 1 8 654 4017 124 23 0 chrUextra 9162768 9163380 -19841276 + HMSBEAGLE_I LTR Gypsy 5063 5688 -841 8 654 3477 25 5 0 chrUextra 9163532 9163936 -19840720 - R1_DM LINE R1 -86 5270 4865 8 654 21 0 0 0 chrUextra 9164282 9164303 -19840353 + AT_rich Low_complexity Low_complexity 1 21 0 8 654 1716 0 0 5 chrUextra 9164411 9164605 -19840051 - ROO_I LTR Pao -8063 193 1 8 654 3917 2 0 0 chrUextra 9164605 9165033 -19839623 - ROO_LTR LTR Pao 0 428 1 8 654 1798 19 14 0 chrUextra 9165290 9165500 -19839156 + R1_DM LINE R1 5144 5356 0 8 654 4035 65 47 0 chrUextra 9165533 9166069 -19838587 + R1_DM LINE R1 1 561 -4795 8 654 7002 0 1 4 chrUextra 9166169 9166948 -19837708 + SSU-rRNA_Dme rRNA rRNA 558 1334 -661 8 654 4471 2 0 0 chrUextra 9167048 9167560 -19837096 - LSU-rRNA_Dme rRNA rRNA -749 3151 2640 8 654 2216 0 4 8 chrUextra 9167562 9167827 -19836829 - R1_DM LINE R1 0 5356 5093 8 654 878 0 0 0 chrUextra 9167927 9168029 -19836627 + Invader2_LTR LTR Gypsy 165 266 0 8 654 4789 15 20 0 chrUextra 9168029 9168640 -19836016 + Invader2_I LTR Gypsy 1 623 -3969 8 654 542 0 0 0 chrUextra 9168640 9168706 -19835950 - ACCORD_LTR LTR Gypsy 0 558 493 8 654 246 150 0 0 chrUextra 9168882 9168922 -19835734 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 255 125 0 0 chrUextra 9168965 9169005 -19835651 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 22 56 0 0 chrUextra 9169018 9169054 -19835602 + AT_rich Low_complexity Low_complexity 1 36 0 8 654 870 9 0 27 chrUextra 9169080 9169192 -19835464 + NTS_DM Other Other 25 133 -107 8 654 1252 18 0 6 chrUextra 9169192 9169357 -19835299 + NTS_DM Other Other 38 201 -39 8 654 870 9 0 27 chrUextra 9169409 9169521 -19835135 + NTS_DM Other Other 25 133 -107 8 654 526 0 16 0 chrUextra 9169521 9169585 -19835071 + NTS_DM Other Other 38 102 -138 8 654 3215 174 11 12 chrUextra 9169687 9170439 -19834217 + SAR_DM Satellite Satellite 326 1076 -396 8 654 2561 118 20 30 chrUextra 9170565 9171340 -19833316 + DMSAT6 Satellite Satellite 1 766 -147 8 654 225 0 0 0 chrUextra 9171443 9171468 -19833188 + (TTGTG)n Simple_repeat Simple_repeat 1 25 0 8 654 4695 6 0 0 chrUextra 9171468 9172013 -19832643 + DMRT1B LINE R1 3536 4080 -1103 8 654 1799 5 0 0 chrUextra 9172009 9172222 -19832434 + DMRT1B LINE R1 4823 5035 -148 8 654 2730 116 5 7 chrUextra 9172524 9172950 -19831706 - HMSBEAGLE_I LTR Gypsy -918 5611 5187 8 654 715 118 0 9 chrUextra 9172988 9173099 -19831557 - HMSBEAGLE_I LTR Gypsy -3139 3390 3281 8 654 2967 197 14 20 chrUextra 9173201 9173980 -19830676 + SAR_DM Satellite Satellite 442 1215 -257 8 654 1597 0 5 0 chrUextra 9174080 9174267 -19830389 - ROO_LTR LTR Pao -240 188 1 8 654 5101 12 0 0 chrUextra 9174267 9174859 -19829797 + IVK_DM LINE I 3264 3855 -1547 8 81 1724 120 0 0 chrUextra 9174959 9175217 -19829439 - Gypsy12_I LTR Gypsy -1083 4463 4206 8 655 3515 89 0 31 chrUextra 9175215 9175738 -19828918 - Gypsy12_I LTR Gypsy -1672 3874 3368 8 655 6825 3 0 0 chrUextra 9175838 9176617 -19828039 + SSU-rRNA_Dme rRNA rRNA 17 795 -1200 8 655 3263 185 10 9 chrUextra 9176723 9177496 -19827160 - SAR_DM Satellite Satellite -396 1076 303 8 655 6757 5 0 0 chrUextra 9177596 9178375 -19826281 + MICROPIA_I LTR Gypsy 3224 4002 -474 8 655 266 19 60 77 chrUextra 9178487 9178604 -19826052 + CT-rich Low_complexity Low_complexity 2 116 0 8 655 610 6 126 0 chrUextra 9178629 9178788 -19825868 + (GA)n Simple_repeat Simple_repeat 2 180 0 8 655 488 119 36 0 chrUextra 9179486 9179570 -19825086 - NTS_DM Other Other -150 90 4 8 655 1301 6 0 18 chrUextra 9179680 9179845 -19824811 - NTS_DM Other Other -78 162 1 8 655 1824 0 21 13 chrUextra 9179845 9180083 -19824573 - NTS_DM Other Other 0 240 1 8 655 264 0 80 60 chrUextra 9180083 9180133 -19824523 - NTS_DM Other Other 0 240 190 8 655 1516 45 0 15 chrUextra 9180234 9180435 -19824221 + R1_DM LINE R1 2046 2243 -3113 8 655 3307 48 2 0 chrUextra 9180591 9181012 -19823644 + Baggins1 LINE LOA 4791 5212 -241 8 655 4663 0 7 2 chrUextra 9181112 9181655 -19823001 + MAX_I LTR Pao 3126 3671 -4243 8 655 1737 166 43 19 chrUextra 9181991 9182765 -19821891 + SAR_DM Satellite Satellite 1 792 -677 8 655 2933 0 0 0 chrUextra 9182870 9183202 -19821454 - ROO_LTR LTR Pao -96 332 1 8 655 3788 0 0 5 chrUextra 9183202 9183649 -19821007 - LSU-rRNA_Dme rRNA rRNA -2830 1070 626 8 655 3734 18 9 2 chrUextra 9183749 9184203 -19820453 - CIRCE LINE Composite -2865 3491 3035 8 655 2406 35 0 37 chrUextra 9184204 9184528 -19820128 - CIRCE LINE Composite -3442 2914 2603 8 655 3060 179 18 27 chrUextra 9184631 9185406 -19819250 - SAR_DM Satellite Satellite -300 1172 405 8 655 44 0 0 0 chrUextra 9185510 9185554 -19819102 + AT_rich Low_complexity Low_complexity 1 44 0 8 655 22 35 0 0 chrUextra 9185729 9185758 -19818898 + AT_rich Low_complexity Low_complexity 1 29 0 8 655 22 35 0 0 chrUextra 9186136 9186165 -19818491 + AT_rich Low_complexity Low_complexity 1 29 0 8 655 3854 29 0 4 chrUextra 9186386 9186879 -19817777 + CIRCE LINE Composite 4490 4980 -1376 8 655 3460 172 8 12 chrUextra 9188148 9188923 -19815733 + SAR_DM Satellite Satellite 246 1017 -455 8 655 6243 33 3 0 chrUextra 9189023 9189802 -19814854 - R1_DM LINE R1 -2007 3349 2569 8 655 5663 49 4 1 chrUextra 9189902 9190665 -19813991 - ZAM_I LTR Gypsy -1838 5652 4888 8 655 3086 163 21 33 chrUextra 9190788 9191544 -19813112 + SAR_DM Satellite Satellite 370 1116 -356 8 655 226 159 15 45 chrUextra 9191489 9191555 -19813101 - XDMR Unknown Unknown 0 361 298 8 655 6005 42 15 1 chrUextra 9191660 9192439 -19812217 - G2_DM LINE Jockey -1723 1379 590 8 655 2796 190 47 4 chrUextra 9192540 9193289 -19811367 + SAR_DM Satellite Satellite 296 1076 -396 8 655 6702 3 1 3 chrUextra 9193418 9194197 -19810459 + SSU-rRNA_Dme rRNA rRNA 570 1347 -648 8 655 2574 210 14 12 chrUextra 9194300 9195032 -19809624 - SAR_DM Satellite Satellite -549 923 191 8 655 687 146 0 21 chrUextra 9194932 9195072 -19809584 + ARS406_DM Unknown Unknown 1 137 -216 8 655 1113 29 0 0 chrUextra 9195817 9195955 -19808701 + G3_DM LINE Jockey 4418 4555 -50 8 655 3711 16 2 0 chrUextra 9196055 9196495 -19808161 + LSU-rRNA_Dme rRNA rRNA 3460 3900 0 8 655 246 150 0 0 chrUextra 9196683 9196723 -19807933 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 22 70 0 0 chrUextra 9196736 9196779 -19807877 + AT_rich Low_complexity Low_complexity 1 43 0 8 655 3076 176 20 24 chrUextra 9196934 9197713 -19806943 + SAR_DM Satellite Satellite 377 1152 -320 8 655 6645 4 1 0 chrUextra 9197815 9198592 -19806064 - Invader2_I LTR Gypsy -3079 1513 736 8 655 1154 110 0 15 chrUextra 9198883 9199225 -19805431 + (CTATT)n Simple_repeat Simple_repeat 1 337 0 8 655 1474 9 0 17 chrUextra 9199227 9199467 -19805189 + (TTCTC)n Simple_repeat Simple_repeat 1 235 0 8 655 2239 24 10 10 chrUextra 9199571 9199871 -19804785 - BATUMI_I LTR Pao -1237 6726 6427 8 655 3663 18 0 2 chrUextra 9199894 9200350 -19804306 + BATUMI_I LTR Pao 7303 7757 -206 8 655 3314 221 22 14 chrUextra 9200450 9202108 -19802548 + SAR_DM Satellite Satellite 1 1672 -500 8 655 28 0 0 0 chrUextra 9202412 9202440 -19802216 + AT_rich Low_complexity Low_complexity 1 28 0 8 655 818 0 0 0 chrUextra 9203087 9203180 -19801476 + LSU-rRNA_Dme rRNA rRNA 3808 3900 0 8 655 27 29 0 0 chrUextra 9203252 9203286 -19801370 + AT_rich Low_complexity Low_complexity 1 34 0 8 655 22 56 0 0 chrUextra 9203350 9203386 -19801270 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 246 150 0 0 chrUextra 9203391 9203431 -19801225 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 246 150 0 0 chrUextra 9203483 9203523 -19801133 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 255 125 0 0 chrUextra 9203566 9203606 -19801050 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 22 56 0 0 chrUextra 9203619 9203655 -19801001 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 870 9 0 27 chrUextra 9203681 9203793 -19800863 + NTS_DM Other Other 25 133 -107 8 655 632 0 0 0 chrUextra 9203793 9203866 -19800790 + NTS_DM Other Other 38 110 -130 8 655 2884 189 24 11 chrUextra 9203970 9204707 -19799949 - SAR_DM Satellite Satellite -535 937 191 8 655 648 158 0 8 chrUextra 9204609 9204743 -19799913 + ARS406_DM Unknown Unknown 1 133 -220 8 655 1668 133 38 12 chrUextra 9204851 9205171 -19799485 + Invader1_LTR LTR Gypsy 96 423 0 8 655 283 357 17 17 chrUextra 9205310 9205612 -19799044 + MICROPIA_I LTR Gypsy 772 1073 -3403 8 655 445 271 0 0 chrUextra 9207482 9207615 -19797041 - DM297_I LTR Gypsy -2049 4118 3986 8 655 2219 261 0 0 chrUextra 9207633 9208261 -19796395 - ROVER-I_DM LTR Gypsy -2549 4035 3408 8 655 2446 98 36 17 chrUextra 9208363 9209110 -19795546 + DMSAT6 Satellite Satellite 1 760 -167 8 655 3178 169 19 30 chrUextra 9209240 9210006 -19794650 - SAR_DM Satellite Satellite -1051 758 1 8 655 611 76 0 21 chrUextra 9210119 9210213 -19794443 + R1_DM LINE R1 1517 1608 -3748 8 655 2716 48 158 1 chrUextra 9210207 9210898 -19793758 + R1_DM LINE R1 1081 1879 -3477 8 655 5776 1 0 34 chrUextra 9211051 9211777 -19792879 + LSU-rRNA_Dme rRNA rRNA 1 701 -3199 8 655 6465 7 1 3 chrUextra 9211877 9212652 -19792004 + BS LINE Jockey 1435 2208 -2918 8 655 450 0 0 0 chrUextra 9212756 9212808 -19791848 - MICROPIA_I LTR Gypsy -4424 52 1 8 655 3930 2 0 61 chrUextra 9212808 9213315 -19791341 - MICROPIA_LTR LTR Gypsy 0 476 1 8 655 1515 14 19 14 chrUextra 9213315 9213531 -19791125 + ACCORD2_I LTR Gypsy 1081 1297 -5915 8 655 63 26 0 0 chrUextra 9214171 9214248 -19790408 + AT_rich Low_complexity Low_complexity 1 77 0 8 655 4146 121 8 11 chrUextra 9214515 9215293 -19789363 + BATUMI_I LTR Pao 4281 5035 -2879 8 655 666 25 0 0 chrUextra 9215393 9215473 -19789183 + (ATAAG)n Simple_repeat Simple_repeat 1 80 0 8 655 1157 101 11 0 chrUextra 9215473 9215650 -19789006 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 655 957 76 0 0 chrUextra 9215650 9215780 -19788876 + (GGAGA)n Simple_repeat Simple_repeat 5 135 0 8 655 6566 0 1 0 chrUextra 9216273 9217051 -19787605 + ROO_I LTR Pao 4461 5239 -3017 8 655 1238 26 0 0 chrUextra 9217151 9217306 -19787350 - QUASIMODO_I LTR Gypsy -4085 1975 1821 8 655 4241 61 2 8 chrUextra 9217315 9217930 -19786726 - QUASIMODO_I LTR Gypsy -4450 1610 1000 8 655 3614 59 42 0 chrUextra 9218236 9218809 -19785847 - PROTOP_A DNA P 0 1105 573 8 655 4000 2 0 2 chrUextra 9218909 9219398 -19785258 - I_DM LINE I -5644 587 100 8 655 2458 0 0 3 chrUextra 9219401 9219688 -19784968 + LSU-rRNA_Dme rRNA rRNA 2875 3160 -740 8 655 3149 176 19 26 chrUextra 9220667 9221444 -19783212 + SAR_DM Satellite Satellite 439 1210 -262 8 655 4562 9 79 0 chrUextra 9221549 9222325 -19782331 - Invader2_I LTR Gypsy -2760 1832 996 8 655 1479 137 26 11 chrUextra 9223305 9223570 -19781086 + MDG1_LTR LTR Gypsy 144 412 -30 8 655 3089 132 30 0 chrUextra 9223575 9224083 -19780573 + IDEFIX_I LTR Gypsy 4800 5322 -306 8 655 5217 95 4 25 chrUextra 9224183 9224951 -19779705 + HETA LINE telomeric 5327 6078 -3 8 655 3454 189 17 8 chrUextra 9225061 9225839 -19778817 + SAR_DM Satellite Satellite 220 1004 -468 8 655 285 106 0 21 chrUextra 9225962 9226010 -19778646 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 655 270 246 92 92 chrUextra 9226585 9226715 -19777941 - Invader1_LTR LTR Gypsy -55 368 239 8 655 3570 185 8 8 chrUextra 9226823 9227574 -19777082 - SAR_DM Satellite Satellite -396 1076 326 8 655 801 33 0 0 chrUextra 9227695 9227787 -19776869 - MAX_LTR LTR Pao -229 92 1 8 655 4750 35 48 48 chrUextra 9227792 9228473 -19776183 - MAX_I LTR Pao -2 7912 7232 8 655 27 49 0 0 chrUextra 9228584 9228625 -19776031 + AT_rich Low_complexity Low_complexity 1 41 0 8 655 534 119 36 0 chrUextra 9228899 9228983 -19775673 - NTS_DM Other Other -150 90 4 8 655 1383 12 0 18 chrUextra 9229093 9229258 -19775398 - NTS_DM Other Other -78 162 1 8 655 677 0 43 32 chrUextra 9229258 9229351 -19775305 - NTS_DM Other Other 0 240 147 8 655 630 0 0 0 chrUextra 9229451 9229521 -19775135 + (GAGAA)n Simple_repeat Simple_repeat 4 73 0 8 655 6713 28 0 0 chrUextra 9230329 9231107 -19773549 - R1_DM LINE R1 -2259 3097 2320 8 655 6669 30 6 0 chrUextra 9231207 9231985 -19772671 + R1_DM LINE R1 1345 2127 -3229 8 655 3288 191 33 8 chrUextra 9232109 9232860 -19771796 - SAR_DM Satellite Satellite -425 1047 278 8 655 534 119 36 0 chrUextra 9233009 9233093 -19771563 - NTS_DM Other Other -150 90 4 8 655 1401 6 0 18 chrUextra 9233203 9233368 -19771288 - NTS_DM Other Other -78 162 1 8 655 1970 8 17 13 chrUextra 9233368 9233607 -19771049 - NTS_DM Other Other 0 240 1 8 655 988 0 30 22 chrUextra 9233607 9233741 -19770915 - NTS_DM Other Other 0 240 106 8 655 6425 0 0 0 chrUextra 9233841 9234533 -19770123 - BARI_DM DNA Tc1 -1033 695 4 8 655 743 23 0 0 chrUextra 9234533 9234619 -19770037 - BARI_DM DNA Tc1 -1 1727 1642 8 655 6464 39 0 1 chrUextra 9234719 9235497 -19769159 - MDG1_I LTR Gypsy -2704 3892 3116 8 655 3625 187 14 8 chrUextra 9235597 9236374 -19768282 - SAR_DM Satellite Satellite -470 1002 221 8 655 3753 171 14 18 chrUextra 9237353 9238131 -19766525 + SAR_DM Satellite Satellite 227 1001 -471 8 655 7131 1 0 1 chrUextra 9238231 9239009 -19765647 - ROO_I LTR Pao -2532 5724 4948 8 655 6018 20 55 1 chrUextra 9239109 9239887 -19764769 - R1_DM LINE R1 -1200 4156 3337 8 655 877 64 22 0 chrUextra 9240554 9240763 -19763893 + PROTOP_B DNA P 570 754 -399 8 655 6967 10 4 1 chrUextra 9240865 9241643 -19763013 + IVK_DM LINE I 3211 3990 -1412 8 655 1818 183 19 25 chrUextra 9241744 9242521 -19762135 - SAR_DM Satellite Satellite -593 772 1 8 655 7005 1 4 0 chrUextra 9242621 9243399 -19761257 - ROO_I LTR Pao -5012 3244 2464 8 655 3440 186 9 19 chrUextra 9243499 9244274 -19760382 - SAR_DM Satellite Satellite -539 933 167 8 655 6519 30 1 15 chrUextra 9244377 9245155 -19759501 + BATUMI_I LTR Pao 1202 1968 -5995 8 655 3424 5 5 0 chrUextra 9245255 9245631 -19759025 - LSU-rRNA_Dme rRNA rRNA -883 3017 2640 8 655 3715 5 0 0 chrUextra 9245629 9246033 -19758623 - R1_DM LINE R1 0 5356 4953 8 655 6786 14 5 1 chrUextra 9246133 9246911 -19757745 - R1_DM LINE R1 -1137 4219 3439 8 655 25 48 0 46 chrUextra 9247294 9247359 -19757297 + AT_rich Low_complexity Low_complexity 1 62 0 8 655 27 29 0 0 chrUextra 9247473 9247507 -19757149 + AT_rich Low_complexity Low_complexity 1 34 0 8 655 392 23 0 0 chrUextra 9247746 9247789 -19756867 + Baggins1 LINE LOA 4727 4769 -684 8 655 4308 2 2 0 chrUextra 9247891 9248358 -19756298 - LSU-rRNA_Dme rRNA rRNA -793 3107 2640 8 655 2850 0 0 3 chrUextra 9248356 9248667 -19755989 - R1_DM LINE R1 0 5356 5047 8 655 3910 62 10 31 chrUextra 9248767 9249285 -19755371 - Gypsy10_I LTR Gypsy -1981 3297 2791 8 655 2053 76 4 0 chrUextra 9249281 9249545 -19755111 - Gypsy10_I LTR Gypsy -3001 2277 2013 8 655 2520 116 33 5 chrUextra 9249653 9250422 -19754234 - DMSAT6 Satellite Satellite -30 790 1 8 655 7198 3 1 0 chrUextra 9250523 9251301 -19753355 - STALKER4_I LTR Gypsy -1982 4548 3770 8 655 2326 91 24 24 chrUextra 9251401 9252012 -19752644 + STALKER4_I LTR Gypsy 664 1341 -5189 8 655 1490 24 0 0 chrUextra 9252012 9252178 -19752478 + BLOOD_LTR LTR Gypsy 1 166 -233 8 655 3496 167 25 26 chrUextra 9252283 9253057 -19751599 - SAR_DM Satellite Satellite -320 1152 380 8 655 3512 107 91 42 chrUextra 9253158 9253891 -19750765 + BATUMI_I LTR Pao 1 769 -7194 8 655 1352 24 0 12 chrUextra 9254035 9254203 -19750453 - CIRCE LINE Composite -1210 5146 4981 8 655 2184 24 0 4 chrUextra 9254560 9254813 -19749843 - CIRCE LINE Composite -1376 4980 4729 8 655 4591 91 8 4 chrUextra 9254913 9255691 -19748965 + G2_DM LINE Jockey 4 533 -2569 8 655 6951 4 13 0 chrUextra 9255791 9256569 -19748087 - DM176_I LTR Gypsy -2504 3916 3129 8 655 6082 41 29 10 chrUextra 9256669 9257441 -19747215 - R1_DM LINE R1 -3926 1430 645 8 655 4354 13 107 8 chrUextra 9257547 9258325 -19746331 - DOC2_DM LINE Jockey -125 4668 3814 8 655 240 172 46 15 chrUextra 9258591 9258656 -19746000 - HMSBEAGLE_I LTR Gypsy -6308 221 155 8 655 376 87 293 13 chrUextra 9258884 9259016 -19745640 - HMSBEAGLE_I LTR Gypsy -6308 221 1 8 655 766 193 0 7 chrUextra 9259015 9259161 -19745495 - DMLTR5 LTR Gypsy 0 266 122 8 655 1931 9 5 0 chrUextra 9260181 9260400 -19744256 - Gypsy4_I LTR Gypsy -6068 220 1 8 655 2600 17 0 0 chrUextra 9260400 9260687 -19743969 - Gypsy4_LTR LTR Gypsy 0 287 1 8 655 536 55 568 0 chrUextra 9261060 9261218 -19743438 + PROTOP_B DNA P 609 856 -297 8 655 3006 162 8 10 chrUextra 9261206 9261808 -19742848 - Jockey2 LINE Jockey -1608 1820 1419 8 655 6035 33 8 33 chrUextra 9261937 9262715 -19741941 - DOC2_DM LINE Jockey -3649 1144 387 8 655 224 156 0 43 chrUextra 9263544 9263591 -19741065 + (CGAGT)n Simple_repeat Simple_repeat 3 47 0 8 655 4623 0 0 0 chrUextra 9263693 9264193 -19740463 + NOMAD_LTR LTR Gypsy 19 518 0 8 655 2069 39 60 0 chrUextra 9264193 9264471 -19740185 - PROTOP DNA P -3727 753 459 8 655 2579 101 49 15 chrUextra 9264571 9265349 -19739307 + DMSAT6 Satellite Satellite 1 804 -87 8 655 3430 179 26 11 chrUextra 9265466 9266206 -19738450 - SAR_DM Satellite Satellite -396 1076 326 8 655 188 111 28 0 chrUextra 9266571 9266607 -19738049 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 655 6898 21 0 0 chrUextra 9267205 9267983 -19736673 + R1_DM LINE R1 1628 2405 -2951 8 655 7083 9 3 0 chrUextra 9268083 9268861 -19735795 + Gypsy4_I LTR Gypsy 511 1290 -4998 8 655 3818 14 0 5 chrUextra 9268961 9269396 -19735260 - G_DM LINE Jockey -31 4315 3883 8 655 2975 15 0 0 chrUextra 9269394 9269737 -19734919 - G_DM LINE Jockey -712 3634 3292 8 655 5762 20 12 90 chrUextra 9269852 9270617 -19734039 + CIRCE LINE Composite 5328 6032 -324 8 655 3194 204 31 8 chrUextra 9270718 9271495 -19733161 - SAR_DM Satellite Satellite -460 1012 218 8 655 719 299 74 38 chrUextra 9271727 9271844 -19732812 - GTWIN_I LTR Gypsy -3195 2972 2815 8 655 1515 30 64 0 chrUextra 9271844 9272047 -19732609 - TLD2 Unknown Unknown -2 216 1 8 655 719 299 74 38 chrUextra 9272047 9272372 -19732284 - GTWIN_I LTR Gypsy -3195 2814 2372 8 655 3871 174 8 9 chrUextra 9272475 9273246 -19731410 + SAR_DM Satellite Satellite 278 1047 -425 8 655 3301 182 14 21 chrUextra 9273351 9274129 -19730527 - SAR_DM Satellite Satellite -599 772 1 8 655 2295 173 9 8 chrUextra 9274229 9275007 -19729649 + SAR_DM Satellite Satellite 1 779 -558 8 655 6727 26 3 0 chrUextra 9275985 9276763 -19727893 + R1_DM LINE R1 2938 3717 -1639 8 655 3369 181 19 29 chrUextra 9276863 9277632 -19727024 + SAR_DM Satellite Satellite 430 1191 -281 8 655 253 33 0 0 chrUextra 9277611 9277641 -19727015 - ARS406_DM Unknown Unknown -167 186 157 8 655 5605 56 4 8 chrUextra 9277741 9278518 -19726138 + R1_DM LINE R1 178 951 -4405 8 655 494 16 0 15 chrUextra 9278618 9278683 -19725973 - DMRT1B LINE R1 -5119 64 1 8 655 2388 133 20 0 chrUextra 9278900 9279389 -19725267 - TART_B1 LINE telomeric -8410 2244 1746 8 655 2569 88 19 5 chrUextra 9279495 9280272 -19724384 - DMSAT6 Satellite Satellite -50 788 1 8 655 6659 8 0 0 chrUextra 9280372 9281149 -19723507 - Gypsy4_I LTR Gypsy -4112 2176 1400 8 655 1722 57 0 31 chrUextra 9281249 9281503 -19723153 - R1_DM LINE R1 -4609 747 502 8 655 2939 54 5 5 chrUextra 9281502 9281895 -19722761 - R1_DM LINE R1 -4963 393 1 8 655 830 20 0 0 chrUextra 9281928 9282026 -19722630 - R1_DM LINE R1 0 5356 5259 8 655 6723 3 0 3 chrUextra 9282126 9282903 -19721753 + SSU-rRNA_Dme rRNA rRNA 123 897 -1098 8 655 6745 4 0 0 chrUextra 9283003 9283780 -19720876 - DM1731_I LTR Copia -661 3315 2539 8 655 574 180 0 15 chrUextra 9283880 9284010 -19720646 - ARS406_DM Unknown Unknown -225 128 1 8 655 3057 177 16 22 chrUextra 9283901 9284657 -19719999 + SAR_DM Satellite Satellite 180 930 -542 8 655 5428 2 0 0 chrUextra 9284757 9285379 -19719277 + LSU-rRNA_Dme rRNA rRNA 1960 2581 -1319 8 655 1282 13 0 0 chrUextra 9285377 9285534 -19719122 + R2_DM LINE R2 510 666 -2941 8 655 5779 5 0 0 chrUextra 9285634 9286300 -19718356 + LSU-rRNA_Dme rRNA rRNA 1967 2632 -1268 8 655 923 0 9 0 chrUextra 9286300 9286411 -19718245 + R1_DM LINE R1 1 112 -5244 8 655 6851 0 0 0 chrUextra 9286511 9287288 -19717368 + Invader6_I LTR Gypsy 144 920 -3179 8 655 6563 3 0 1 chrUextra 9287388 9288165 -19716491 - ROO_I LTR Pao -1451 6805 6030 8 655 3324 177 9 13 chrUextra 9288268 9289040 -19715616 + SAR_DM Satellite Satellite 293 1061 -411 8 655 2897 3 0 0 chrUextra 9289142 9289476 -19715180 + LSU-rRNA_Dme rRNA rRNA 3567 3900 0 8 655 22 56 0 0 chrUextra 9289548 9289584 -19715072 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 246 150 0 0 chrUextra 9289589 9289629 -19715027 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 246 150 0 0 chrUextra 9289681 9289721 -19714935 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 255 125 0 0 chrUextra 9289764 9289804 -19714852 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 22 56 0 0 chrUextra 9289817 9289853 -19714803 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 285 0 0 75 chrUextra 9289879 9289919 -19714737 + NTS_DM Other Other 25 61 -179 8 655 4242 100 4 24 chrUextra 9290045 9290741 -19713915 + S_DM DNA Tc1 1055 1736 0 8 655 448 48 16 0 chrUextra 9290741 9290796 -19713860 + CIRCE LINE Composite 4493 4548 -1808 8 655 3413 43 7 2 chrUextra 9290896 9291336 -19713320 + G5_DM LINE Jockey 1429 1870 -2986 8 655 2999 14 0 0 chrUextra 9291315 9291673 -19712983 + G5_DM LINE Jockey 2604 2961 -1895 8 655 259 131 234 0 chrUextra 9291824 9291961 -19712695 + (CTAAA)n Simple_repeat Simple_repeat 5 173 0 8 655 259 131 234 0 chrUextra 9292200 9292337 -19712319 + (CTAAA)n Simple_repeat Simple_repeat 5 173 0 8 655 2908 136 31 4 chrUextra 9292651 9293244 -19711412 + BS3_DM LINE Jockey 1 421 -1369 8 655 1493 69 10 0 chrUextra 9293225 9293427 -19711229 + BS3_DM LINE Jockey 526 729 -1061 8 655 2678 193 57 26 chrUextra 9293527 9294304 -19710352 + SAR_DM Satellite Satellite 430 1230 -242 8 655 6119 12 0 1 chrUextra 9294404 9295148 -19709508 + PROTOP_A DNA P 363 1105 0 8 655 262 61 0 0 chrUextra 9295148 9295181 -19709475 + Gypsy12_I LTR Gypsy 909 941 -4605 8 655 2279 103 29 32 chrUextra 9295281 9296051 -19708605 + DMSAT6 Satellite Satellite 1 766 -155 8 655 324 328 16 11 chrUextra 9296169 9296360 -19708296 - BLASTOPIA_I LTR Gypsy -749 3732 3541 8 655 357 283 18 25 chrUextra 9296697 9296860 -19707796 - MDG3_I LTR Gypsy -1562 3424 3263 8 655 6602 1 0 0 chrUextra 9297035 9297812 -19706844 + BLOOD_I LTR Gypsy 1479 2255 -4358 8 655 2333 110 15 31 chrUextra 9297912 9298689 -19705967 - DMSAT6 Satellite Satellite -113 764 1 8 655 6619 1 0 0 chrUextra 9298789 9299566 -19705090 + ROO_I LTR Pao 3687 4463 -3793 8 655 5395 53 39 34 chrUextra 9299666 9300439 -19704217 - CIRCE LINE Composite -5577 779 3 8 655 297 28 0 0 chrUextra 9300543 9300579 -19704077 - Gypsy3_I LTR Gypsy -250 5927 5892 8 655 4769 84 21 3 chrUextra 9300581 9301320 -19703336 - Gypsy3_I LTR Gypsy -286 6726 5276 8 655 2221 175 32 10 chrUextra 9301432 9302197 -19702459 + SAR_DM Satellite Satellite 1 781 -1037 8 655 1252 18 0 6 chrUextra 9302326 9302491 -19702165 - NTS_DM Other Other -39 201 38 8 655 870 9 0 27 chrUextra 9302491 9302603 -19702053 - NTS_DM Other Other -107 133 25 8 655 22 56 0 0 chrUextra 9302629 9302665 -19701991 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 255 125 0 0 chrUextra 9302678 9302718 -19701938 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 246 150 0 0 chrUextra 9302761 9302801 -19701855 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 246 150 0 0 chrUextra 9302853 9302893 -19701763 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 246 150 0 0 chrUextra 9302945 9302985 -19701671 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 22 56 0 0 chrUextra 9302990 9303026 -19701630 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 2738 216 24 34 chrUextra 9303212 9303949 -19700707 + ROVER-I_DM LTR Gypsy 1689 2418 -4166 8 655 6097 28 0 1 chrUextra 9304051 9304828 -19699828 + PROTOP_A DNA P 281 1056 -49 8 655 1991 4 0 4 chrUextra 9304928 9305168 -19699488 - Copia_I LTR Copia -4354 239 1 8 655 2297 0 0 0 chrUextra 9305168 9305444 -19699212 - Copia_LTR LTR Copia 0 276 1 8 655 2270 8 4 0 chrUextra 9305444 9305703 -19698953 - SSU-rRNA_Dme rRNA rRNA -28 1967 1708 8 81 6476 4 1 0 chrUextra 9305805 9306582 -19698074 + STALKER4_I LTR Gypsy 3061 3838 -2692 8 656 2948 199 21 23 chrUextra 9306690 9307458 -19697198 - HETA LINE telomeric -1704 4377 3612 8 656 3374 170 13 18 chrUextra 9307561 9308336 -19696320 - SAR_DM Satellite Satellite -369 1103 333 8 656 319 299 16 16 chrUextra 9308845 9308974 -19695682 - DIVER2_I LTR Pao -1779 2368 2240 8 656 343 255 27 18 chrUextra 9309101 9309213 -19695443 - DIVER2_I LTR Pao -2328 1819 1707 8 656 6240 1 0 32 chrUextra 9309313 9310090 -19694566 - LSU-rRNA_Dme rRNA rRNA -3118 782 31 8 656 571 99 0 11 chrUextra 9310207 9310299 -19694357 + DMRT1B LINE R1 155 245 -4938 8 656 299 230 126 0 chrUextra 9310878 9310965 -19693691 - Gypsy12_I LTR Gypsy -2217 3329 3232 8 656 3742 2 0 0 chrUextra 9311092 9311520 -19693136 - ROO_LTR LTR Pao 0 428 1 8 656 1620 0 0 3 chrUextra 9311520 9311814 -19692842 + (TTATA)n Simple_repeat Simple_repeat 1 293 0 8 656 309 51 0 0 chrUextra 9313444 9313483 -19691173 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 656 4484 2 4 0 chrUextra 9313698 9314215 -19690441 + LSU-rRNA_Dme rRNA rRNA 3382 3900 0 8 656 27 29 0 0 chrUextra 9314287 9314321 -19690335 + AT_rich Low_complexity Low_complexity 1 34 0 8 656 230 175 0 0 chrUextra 9314415 9314455 -19690201 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 656 3052 11 0 0 chrUextra 9314575 9314942 -19689714 + FW_DM LINE Jockey 4326 4692 0 8 656 600 193 46 23 chrUextra 9314977 9315152 -19689504 + TART LINE telomeric 9364 9542 -4935 8 656 828 54 0 0 chrUextra 9315162 9315274 -19689382 + HETA LINE telomeric 5965 6076 -5 8 656 28 29 0 0 chrUextra 9315317 9315352 -19689304 + AT_rich Low_complexity Low_complexity 1 35 0 8 656 6619 1 1 0 chrUextra 9315455 9316229 -19688427 + DOC LINE Jockey 1411 2185 -2540 8 656 6220 26 19 3 chrUextra 9316329 9317105 -19687551 + R1_DM LINE R1 4015 4803 -553 8 656 270 125 21 0 chrUextra 9317301 9317349 -19687307 - NTS_DM Other Other -191 49 1 8 656 549 183 44 28 chrUextra 9317349 9317529 -19687127 - NTS_DM Other Other 0 240 58 8 656 917 130 0 0 chrUextra 9317543 9317697 -19686959 - NTS_DM Other Other -86 154 1 8 656 248 146 21 0 chrUextra 9317779 9317827 -19686829 - NTS_DM Other Other -191 49 1 8 656 582 126 45 32 chrUextra 9317827 9317983 -19686673 - NTS_DM Other Other 0 240 83 8 656 6231 6 9 3 chrUextra 9318083 9318860 -19685796 - ROO_I LTR Pao -7388 868 87 8 656 6764 4 0 0 chrUextra 9318960 9319737 -19684919 + Invader1_I LTR Gypsy 1186 1962 -1224 8 656 1474 32 0 7 chrUextra 9319841 9320126 -19684530 + (GAGAA)n Simple_repeat Simple_repeat 1 283 0 8 656 6503 8 1 0 chrUextra 9320714 9321491 -19683165 - DMRT1A LINE R1 -3656 1527 750 8 656 408 17 0 33 chrUextra 9321591 9321652 -19683004 - DMSAT6 Satellite Satellite -83 387 329 8 656 3244 177 14 23 chrUextra 9322468 9323244 -19681412 + SAR_DM Satellite Satellite 274 1042 -430 8 656 842 0 0 10 chrUextra 9323345 9323445 -19681211 - LSU-rRNA_Dme rRNA rRNA -2014 1886 1788 8 656 5268 3 5 5 chrUextra 9323489 9324122 -19680534 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1156 8 656 5992 39 13 3 chrUextra 9324222 9324998 -19679658 - R1_DM LINE R1 -3941 1415 632 8 656 2204 119 24 44 chrUextra 9325118 9325876 -19678780 + DMSAT6 Satellite Satellite 1 742 -3 8 656 5659 30 154 0 chrUextra 9325976 9326753 -19677903 - MAX_I LTR Pao -5629 2285 1389 8 656 6565 13 1 0 chrUextra 9326853 9327630 -19677026 + Gypsy4_I LTR Gypsy 338 1115 -5173 8 656 581 200 7 15 chrUextra 9327863 9328000 -19676656 + HETRP_DM Satellite Satellite 1529 1664 -208 8 656 655 186 7 14 chrUextra 9328168 9328310 -19676346 + HETRP_DM Satellite Satellite 1529 1669 -203 8 656 192 40 0 0 chrUextra 9328441 9328466 -19676190 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 656 3742 2 0 0 chrUextra 9328607 9329035 -19675621 - ROO_LTR LTR Pao 0 428 1 8 656 215 351 0 0 chrUextra 9329153 9329227 -19675429 + C-rich Low_complexity Low_complexity 5 78 0 8 656 6502 8 0 1 chrUextra 9329484 9330261 -19674395 + BURDOCK_I LTR Gypsy 67 842 -5018 8 656 1551 170 25 16 chrUextra 9330361 9331045 -19673611 - SAR_DM Satellite Satellite -659 689 1 8 656 235 146 0 0 chrUextra 9331391 9331432 -19673224 - DMCR1A LINE CR1 -3686 784 744 8 656 579 138 43 17 chrUextra 9331499 9331699 -19672957 + DMCR1A LINE CR1 365 460 -4010 8 656 2198 20 7 0 chrUextra 9331718 9332015 -19672641 + DOC5_DM LINE Jockey 3979 4277 -405 8 656 259 146 21 0 chrUextra 9332165 9332213 -19672443 + NTS_DM Other Other 1 49 -191 8 656 802 115 0 0 chrUextra 9332311 9332441 -19672215 + NTS_DM Other Other 8 137 -103 8 656 404 121 70 39 chrUextra 9332449 9332578 -19672078 + NTS_DM Other Other 108 240 0 8 656 1000 116 0 6 chrUextra 9332716 9332890 -19671766 + NTS_DM Other Other 1 173 -67 8 656 3337 178 8 19 chrUextra 9332992 9333762 -19670894 - SAR_DM Satellite Satellite -466 1006 246 8 656 256 128 0 0 chrUextra 9333722 9333769 -19670887 + ARS406_DM Unknown Unknown 1 47 -306 8 656 2998 0 0 0 chrUextra 9333869 9334210 -19670446 + TABOR_LTR LTR Gypsy 166 506 0 8 656 1611 171 104 26 chrUextra 9334231 9334646 -19670010 + TART LINE telomeric 8983 9429 -5048 8 656 22 70 0 0 chrUextra 9334788 9334831 -19669825 + AT_rich Low_complexity Low_complexity 1 43 0 8 656 1003 101 252 0 chrUextra 9334923 9335180 -19669476 + DNAREP1_DM LINE Penelope 273 594 0 8 656 6658 9 0 0 chrUextra 9335623 9336400 -19668256 - DM1731_I LTR Copia -251 3725 2949 8 656 445 190 17 8 chrUextra 9336527 9336644 -19668012 - ARS406_DM Unknown Unknown -235 118 1 8 656 907 180 41 16 chrUextra 9336541 9336784 -19667872 + SAR_DM Satellite Satellite 541 789 -683 8 656 1070 182 25 8 chrUextra 9336795 9337267 -19667389 + SAR_DM Satellite Satellite 1 479 -680 8 656 5614 28 8 22 chrUextra 9337377 9338154 -19666502 - Gypsy12_LTR LTR Gypsy -587 1749 984 8 656 6394 18 1 6 chrUextra 9338254 9339031 -19665625 + BATUMI_I LTR Pao 5534 6306 -1657 8 656 2855 6 0 0 chrUextra 9339131 9339461 -19665195 + DMRT1B LINE R1 4854 5183 0 8 656 369 194 53 53 chrUextra 9339612 9339743 -19664913 - Copia_I LTR Copia -58 4535 4405 8 656 22 56 0 0 chrUextra 9339788 9339824 -19664832 + AT_rich Low_complexity Low_complexity 1 36 0 8 656 4984 30 0 3 chrUextra 9340008 9340643 -19664013 - IDEFIX_I LTR Gypsy -3159 2469 1837 8 656 909 44 7 21 chrUextra 9340644 9340784 -19663872 - IDEFIX_LTR LTR Gypsy -20 574 437 8 656 335 296 19 19 chrUextra 9341205 9341367 -19663289 - MDG3_I LTR Gypsy -1562 3424 3263 8 656 6404 21 0 1 chrUextra 9341760 9342532 -19662124 + R1_DM LINE R1 3909 4679 -677 8 656 6503 8 3 9 chrUextra 9342636 9343412 -19661244 - MICROPIA_I LTR Gypsy -1413 3063 2293 8 656 588 6 0 137 chrUextra 9343516 9343721 -19660935 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 8 656 278 136 136 0 chrUextra 9343669 9343787 -19660869 + (CAAA)n Simple_repeat Simple_repeat 2 135 0 8 656 1652 280 13 12 chrUextra 9344388 9345144 -19659512 - Stalker2_I LTR Gypsy -3344 4058 3302 8 656 2434 110 20 19 chrUextra 9345264 9346025 -19658631 - DMSAT6 Satellite Satellite -28 761 1 8 656 3741 42 42 0 chrUextra 9346140 9346658 -19657998 + PROTOP_A DNA P 570 1105 0 8 656 1359 191 29 59 chrUextra 9347275 9347719 -19656937 + Gypsy_LTR LTR Gypsy 1 431 -51 8 656 464 0 0 0 chrUextra 9347892 9347945 -19656711 - NTS_DM Other Other -150 90 38 8 656 870 9 0 27 chrUextra 9347945 9348057 -19656599 - NTS_DM Other Other -107 133 25 8 656 1252 18 0 6 chrUextra 9348109 9348274 -19656382 - NTS_DM Other Other -39 201 38 8 656 246 27 0 0 chrUextra 9348274 9348307 -19656349 - NTS_DM Other Other -107 133 101 8 656 2879 3 0 0 chrUextra 9348307 9348637 -19656019 - TRANSPAC_LTR LTR Gypsy 0 330 1 8 656 270 31 0 0 chrUextra 9348636 9348668 -19655988 - TRANSPAC_I LTR Gypsy 0 4590 4559 8 656 21 71 0 0 chrUextra 9349290 9349332 -19655324 + AT_rich Low_complexity Low_complexity 1 42 0 8 656 26 50 0 0 chrUextra 9349356 9349396 -19655260 + AT_rich Low_complexity Low_complexity 1 40 0 8 656 458 133 100 0 chrUextra 9349450 9349540 -19655116 - DNAREP1_DM LINE Penelope 0 594 496 8 656 3326 177 10 13 chrUextra 9349644 9350418 -19654238 - SAR_DM Satellite Satellite -464 1008 237 8 656 2463 211 49 18 chrUextra 9350520 9351296 -19653360 + SAR_DM Satellite Satellite 408 1207 -265 8 656 3215 39 51 63 chrUextra 9351399 9351889 -19652767 - DMCR1A LINE CR1 -3728 742 259 8 656 3160 194 15 21 chrUextra 9352272 9353046 -19651610 + SAR_DM Satellite Satellite 1 769 -208 8 656 6088 18 3 0 chrUextra 9353148 9353924 -19650732 + QUASIMODO_I LTR Gypsy 3073 3850 -2210 8 656 5837 4 0 1 chrUextra 9354900 9355577 -19649079 - R2_DM LINE R2 -2929 678 3 8 656 785 21 0 0 chrUextra 9355581 9355676 -19648980 - LSU-rRNA_Dme rRNA rRNA -1316 2584 2490 8 656 1303 206 43 27 chrUextra 9355779 9356148 -19648508 - G_DM LINE Jockey -2937 1409 1035 8 656 32 0 0 0 chrUextra 9356176 9356208 -19648448 + AT_rich Low_complexity Low_complexity 1 32 0 8 656 1620 0 0 0 chrUextra 9356652 9356946 -19647710 + (GAGAA)n Simple_repeat Simple_repeat 1 294 0 8 656 4034 17 0 0 chrUextra 9356952 9357428 -19647228 + MAX_I LTR Pao 3138 3613 -4301 8 656 764 10 0 59 chrUextra 9357528 9357630 -19647026 - CIRCE LINE Composite -4373 1983 1888 8 656 346 304 25 25 chrUextra 9357535 9357697 -19646959 - Gypsy12_I LTR Gypsy -1550 3996 3835 8 656 3895 48 32 30 chrUextra 9357706 9358265 -19646391 - CIRCE LINE Composite -4474 1882 1323 8 656 284 178 82 41 chrUextra 9358463 9358633 -19646023 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 8 656 270 198 82 47 chrUextra 9358557 9358727 -19645929 + (CAAGA)n Simple_repeat Simple_repeat 3 178 0 8 656 280 174 83 42 chrUextra 9358726 9358959 -19645697 + (TAGA)n Simple_repeat Simple_repeat 1 242 0 8 656 366 153 127 0 chrUextra 9358949 9359106 -19645550 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 8 656 1081 106 14 24 chrUextra 9359290 9359502 -19645154 + TAHRE LINE telomeric 10242 10451 -12 8 656 3851 57 0 16 chrUextra 9359501 9360056 -19644600 + TART LINE telomeric 630 1175 -13302 8 656 6208 29 1 4 chrUextra 9360156 9360932 -19643724 - R1_DM LINE R1 -1382 3974 3201 8 656 6075 25 35 1 chrUextra 9361032 9361808 -19642848 - Gypsy4_I LTR Gypsy -1547 4741 3940 8 656 6385 23 1 0 chrUextra 9361908 9362684 -19641972 - R1_DM LINE R1 -2917 2439 1663 8 656 1200 0 0 0 chrUextra 9362784 9362921 -19641735 - ROO_I LTR Pao -8119 137 1 8 656 3741 2 0 0 chrUextra 9362921 9363349 -19641307 - ROO_LTR LTR Pao 0 428 1 8 656 6533 3 0 0 chrUextra 9363660 9364436 -19640220 + Copia_I LTR Copia 1836 2611 -1982 8 656 3376 240 59 30 chrUextra 9364536 9366188 -19638468 - SAR_DM Satellite Satellite -1087 1699 1 8 656 6509 16 0 0 chrUextra 9366289 9367064 -19637592 - R1_DM LINE R1 -2936 2420 1646 8 656 3088 148 42 36 chrUextra 9367164 9367857 -19636799 + DMRT1C LINE R1 2326 3022 -2421 8 656 606 73 0 0 chrUextra 9367858 9367940 -19636716 + DMRT1C LINE R1 4367 4448 -995 8 656 4259 2 0 0 chrUextra 9368040 9368542 -19636114 - QUASIMODO_I LTR Gypsy -3346 2714 2213 8 656 2460 0 0 3 chrUextra 9368532 9368816 -19635840 - QUASIMODO_I LTR Gypsy -5352 708 426 8 656 334 307 7 7 chrUextra 9369149 9369290 -19635366 + Invader3_I LTR Gypsy 2889 3029 -1859 8 656 239 320 0 0 chrUextra 9369592 9369689 -19634967 + Invader3_I LTR Gypsy 3317 3413 -1475 8 656 1124 37 0 0 chrUextra 9369792 9369954 -19634702 + FW_DM LINE Jockey 4527 4688 -4 8 656 4689 36 34 2 chrUextra 9369955 9370568 -19634088 - R1_DM LINE R1 -3966 1390 758 8 656 2838 173 7 8 chrUextra 9370668 9371285 -19633371 + SAR_DM Satellite Satellite 418 1033 -439 8 656 6522 139 6 25 chrUextra 9371279 9372320 -19632336 + FW_DM LINE Jockey 2375 3395 -1297 8 656 2959 182 18 28 chrUextra 9372422 9373196 -19631460 - SAR_DM Satellite Satellite -300 1172 407 8 656 2909 198 12 19 chrUextra 9373296 9374072 -19630584 - SAR_DM Satellite Satellite -259 1213 444 8 656 26 50 0 0 chrUextra 9374172 9374212 -19630444 + AT_rich Low_complexity Low_complexity 1 40 0 8 656 488 119 36 0 chrUextra 9374486 9374570 -19630086 - NTS_DM Other Other -150 90 4 8 656 1271 6 0 24 chrUextra 9374680 9374846 -19629810 - NTS_DM Other Other -78 162 1 8 656 682 0 39 29 chrUextra 9374846 9374948 -19629708 - NTS_DM Other Other 0 240 138 8 656 373 191 11 11 chrUextra 9375048 9375143 -19629513 + XDMR_DM Unknown Unknown 259 353 -7 8 656 3258 165 11 20 chrUextra 9375064 9375814 -19628842 - SAR_DM Satellite Satellite -352 1120 378 8 656 1968 16 0 89 chrUextra 9375924 9376204 -19628452 - LSU-rRNA_Dme rRNA rRNA -3645 255 1 8 656 22 56 0 0 chrUextra 9376480 9376516 -19628140 + AT_rich Low_complexity Low_complexity 1 36 0 8 656 6080 1 0 0 chrUextra 9376800 9377509 -19627147 - FW_DM LINE Jockey -3981 711 3 8 656 4514 15 54 0 chrUextra 9377676 9378451 -19626205 + DOC2_DM LINE Jockey 2881 3697 -1096 8 656 316 212 92 24 chrUextra 9379114 9379278 -19625378 + (TTCTG)n Simple_repeat Simple_repeat 5 179 0 8 656 3940 70 6 4 chrUextra 9379428 9379977 -19624679 - R1_DM LINE R1 -4784 572 23 8 656 1734 19 0 0 chrUextra 9379998 9380204 -19624452 - R1_DM LINE R1 0 5356 5151 8 656 3429 171 9 10 chrUextra 9380308 9381080 -19623576 + SAR_DM Satellite Satellite 267 1037 -435 8 656 957 231 30 42 chrUextra 9381225 9381586 -19623070 + Gypsy12_LTR LTR Gypsy 899 1255 -1081 8 656 692 234 81 32 chrUextra 9381596 9381941 -19622715 + Gypsy12_LTR LTR Gypsy 1456 1817 -519 8 656 6790 1 0 0 chrUextra 9382058 9382832 -19621824 + Invader4_I LTR Gypsy 178 951 -1462 8 656 3234 175 8 19 chrUextra 9382937 9383693 -19620963 + SAR_DM Satellite Satellite 371 1118 -354 8 656 298 192 30 20 chrUextra 9383607 9383708 -19620948 - XDMR_DM Unknown Unknown 0 360 259 8 656 2283 105 17 53 chrUextra 9383808 9384584 -19620072 + DMSAT6 Satellite Satellite 1 747 -109 8 656 2916 191 30 21 chrUextra 9384684 9385460 -19619196 + SAR_DM Satellite Satellite 422 1204 -268 8 656 624 248 36 73 chrUextra 9385581 9385911 -19618745 + Gypsy12_LTR LTR Gypsy 832 1149 -1187 8 656 29 60 0 0 chrUextra 9385917 9385967 -19618689 + AT_rich Low_complexity Low_complexity 1 50 0 8 656 1660 153 13 10 chrUextra 9386025 9386336 -19618320 + Gypsy12_LTR LTR Gypsy 1774 2085 -251 8 656 811 42 25 8 chrUextra 9386436 9386555 -19618101 + MDG3_LTR LTR Gypsy 147 267 0 8 656 5678 0 1 0 chrUextra 9386554 9387212 -19617444 + MDG3_I LTR Gypsy 1 659 -4327 8 656 4389 41 2 12 chrUextra 9387312 9387879 -19616777 + G5A_DM LINE Jockey 2278 2838 -3 8 656 349 269 0 0 chrUextra 9387906 9388014 -19616642 - Gypsy7_I LTR Gypsy -3317 1667 1560 8 656 3319 0 0 3 chrUextra 9389064 9389425 -19615231 + STALKER4_LTR LTR Gypsy 43 402 0 8 656 2797 82 0 29 chrUextra 9389425 9389840 -19614816 + STALKER4_I LTR Gypsy 1 403 -6127 8 656 7144 4 0 0 chrUextra 9389940 9390716 -19613940 + ACCORD_I LTR Gypsy 2886 3661 -2627 8 656 2529 93 39 18 chrUextra 9390823 9391591 -19613065 + DMSAT6 Satellite Satellite 1 784 -82 8 656 1512 70 8 8 chrUextra 9391692 9392284 -19612372 + (CTATT)n Simple_repeat Simple_repeat 1 592 0 8 656 834 86 20 0 chrUextra 9392312 9392463 -19612193 + (CTATT)n Simple_repeat Simple_repeat 2 155 0 8 656 21 0 0 0 chrUextra 9392769 9392790 -19611866 + AT_rich Low_complexity Low_complexity 1 21 0 8 656 2458 42 19 22 chrUextra 9392815 9393132 -19611524 + NINJA_LTR LTR Pao 1 316 -1 8 656 1581 24 9 24 chrUextra 9393133 9393344 -19611312 + NINJA_I LTR Pao 1 208 -5803 8 656 7222 3 1 0 chrUextra 9393444 9394220 -19610436 - R2_DM LINE R2 -1708 1899 1123 8 656 410 192 0 20 chrUextra 9394320 9394421 -19610235 + XDMR_DM Unknown Unknown 262 360 0 8 656 3874 154 12 22 chrUextra 9394335 9395093 -19609563 - SAR_DM Satellite Satellite -354 1118 369 8 656 5447 27 8 0 chrUextra 9395196 9395829 -19608827 + R1_DM LINE R1 4719 5356 0 8 656 851 55 9 0 chrUextra 9395862 9395972 -19608684 + R1_DM LINE R1 1 111 -5245 8 656 344 342 32 37 chrUextra 9396086 9396532 -19608124 - BLASTOPIA_I LTR Gypsy -703 4185 3541 8 656 225 226 19 0 chrUextra 9396794 9396847 -19607809 - BLASTOPIA_I LTR Gypsy -1300 3181 3128 8 656 2542 111 16 17 chrUextra 9396948 9397709 -19606947 + DMSAT6 Satellite Satellite 1 759 -159 8 656 3171 186 12 4 chrUextra 9397829 9398600 -19606056 + SAR_DM Satellite Satellite 1 776 -1037 8 656 4761 29 0 0 chrUextra 9398700 9399251 -19605405 - PROTOP_A DNA P -554 551 1 8 656 2064 0 0 0 chrUextra 9399581 9399803 -19604853 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 656 21 95 0 0 chrUextra 9399815 9399878 -19604778 + AT_rich Low_complexity Low_complexity 1 63 0 8 656 34 24 0 0 chrUextra 9400091 9400132 -19604524 + AT_rich Low_complexity Low_complexity 1 41 0 8 656 4487 76 5 18 chrUextra 9400452 9401067 -19603589 - HETA LINE telomeric -3574 2507 1901 8 656 1319 48 0 29 chrUextra 9401055 9401227 -19603429 - HETA LINE telomeric -4519 1562 1396 8 656 6726 6 25 0 chrUextra 9401328 9402104 -19602552 - IDEFIX_I LTR Gypsy -4365 1263 469 8 656 5068 22 80 5 chrUextra 9402204 9402980 -19601676 + FW_DM LINE Jockey 3535 4368 -324 8 656 2172 0 0 0 chrUextra 9403466 9403706 -19600950 - ALUII_DM Unknown Unknown 0 240 1 8 656 21 57 0 0 chrUextra 9403706 9403741 -19600915 + AT_rich Low_complexity Low_complexity 1 35 0 8 656 268 196 0 19 chrUextra 9403976 9404028 -19600628 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 268 196 0 19 chrUextra 9404068 9404120 -19600536 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 250 216 0 19 chrUextra 9404160 9404212 -19600444 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 278 176 0 19 chrUextra 9404243 9404295 -19600361 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 22 56 0 0 chrUextra 9404308 9404344 -19600312 + AT_rich Low_complexity Low_complexity 1 36 0 8 656 936 9 0 27 chrUextra 9404370 9404482 -19600174 + NTS_DM Other Other 25 133 -107 8 656 1350 18 0 6 chrUextra 9404482 9404647 -19600009 + NTS_DM Other Other 38 201 -39 8 656 2935 96 35 0 chrUextra 9404830 9405234 -19599422 + Gypsy12_I LTR Gypsy 3171 3588 -1958 8 656 3133 30 11 0 chrUextra 9405234 9405605 -19599051 + PROTOP_A DNA P 1 375 -730 8 656 4480 109 2 3 chrUextra 9405706 9406480 -19598176 + G_DM LINE Jockey 688 1430 -612 8 656 672 12 75 0 chrUextra 9406677 9406757 -19597899 + PROTOP_B DNA P 1 86 -1067 8 656 1512 143 4 4 chrUextra 9406755 9407007 -19597649 + TART LINE telomeric 3632 3883 -10594 8 656 2287 108 17 17 chrUextra 9406987 9407343 -19597313 + TART LINE telomeric 5323 5678 -8799 8 656 6966 16 3 0 chrUextra 9407455 9408230 -19596426 - BEL_I LTR Pao -209 5195 4419 8 656 669 201 20 0 chrUextra 9408334 9408483 -19596173 + SAR_DM Satellite Satellite 536 687 -785 8 656 289 281 0 0 chrUextra 9408495 9408577 -19596079 - XDMR_DM Unknown Unknown -273 87 6 8 656 3008 173 13 5 chrUextra 9408504 9409104 -19595552 + SAR_DM Satellite Satellite 248 852 -620 8 656 2480 181 13 10 chrUextra 9409205 9409980 -19594676 - SAR_DM Satellite Satellite -675 776 1 8 656 698 166 38 22 chrUextra 9410082 9410273 -19594383 + DNAREP1_DM LINE Penelope 117 332 -262 8 656 332 126 273 11 chrUextra 9410281 9410369 -19594287 + DNAREP1_DM LINE Penelope 222 332 -262 8 656 393 202 17 9 chrUextra 9410349 9410464 -19594192 + DNAREP1_DM LINE Penelope 184 299 -295 8 656 1332 63 132 0 chrUextra 9410520 9410710 -19593946 - DMCR1A LINE CR1 -428 4042 3828 8 656 755 103 206 0 chrUextra 9410729 9410855 -19593801 - DMCR1A LINE CR1 -1159 3311 3160 8 656 5136 45 11 0 chrUextra 9410955 9411572 -19593084 - BS2 LINE Jockey -1376 3345 2722 8 656 421 268 13 13 chrUextra 9411572 9411727 -19592929 + Copia_I LTR Copia 1976 2130 -2463 8 656 3111 183 50 7 chrUextra 9411862 9412582 -19592074 - SAR_DM Satellite Satellite -396 1076 326 8 656 3262 99 6 6 chrUextra 9412705 9413180 -19591476 - TART LINE telomeric -7269 7208 6734 8 656 473 265 66 81 chrUextra 9413208 9413479 -19591177 - TART_B1 LINE telomeric -1448 9206 8940 8 656 6899 3 0 1 chrUextra 9413599 9414355 -19590301 - R1_DM LINE R1 0 5356 4602 8 656 1102 30 0 15 chrUextra 9414455 9414591 -19590065 + QUASIMODO_LTR LTR Gypsy 525 658 0 8 656 2570 156 12 8 chrUextra 9415330 9416104 -19588552 + SAR_DM Satellite Satellite 1 777 -841 8 656 6952 5 0 1 chrUextra 9416205 9416980 -19587676 - MDG1_I LTR Gypsy -1551 5045 4272 8 656 7072 8 0 0 chrUextra 9417080 9417855 -19586801 + Invader3_I LTR Gypsy 2319 3093 -1795 8 656 5584 108 0 1 chrUextra 9417964 9418730 -19585926 + Gypsy12_I LTR Gypsy 3637 4401 -1145 8 656 3624 175 12 9 chrUextra 9418841 9419590 -19585066 + SAR_DM Satellite Satellite 326 1076 -396 8 656 671 84 0 21 chrUextra 9419705 9419802 -19584854 - BATUMI_I LTR Pao -7868 95 1 8 656 2085 47 3 86 chrUextra 9419802 9420126 -19584530 - BATUMI_I LTR Pao -679 7284 6988 8 656 2115 175 11 6 chrUextra 9420117 9420480 -19584176 - ROVER-I_DM LTR Gypsy -1637 4947 4583 8 656 890 19 0 0 chrUextra 9420580 9420684 -19583972 - MICROPIA_LTR LTR Gypsy -141 335 232 8 656 2113 9 0 0 chrUextra 9420713 9420945 -19583711 - MICROPIA_LTR LTR Gypsy -244 232 1 8 656 3498 10 42 2 chrUextra 9420945 9421355 -19583301 - MICROPIA_I LTR Gypsy 0 4476 4051 8 656 1003 70 7 18 chrUextra 9421464 9422226 -19582430 + RSP Satellite Satellite 1 753 -5 8 656 685 71 0 0 chrUextra 9422331 9422428 -19582228 + TART_B1 LINE telomeric 2309 2405 -8249 8 656 243 32 0 0 chrUextra 9422428 9422459 -19582197 + PROTOP_B DNA P 1 31 -1122 8 656 3128 17 0 40 chrUextra 9422457 9422834 -19581822 + PROTOP_A DNA P 728 1089 -16 8 656 1790 110 49 0 chrUextra 9422841 9423105 -19581551 + TART_B1 LINE telomeric 2399 2675 -7979 8 656 253 294 0 0 chrUextra 9423221 9423289 -19581367 - OSVALDO_I LTR Gypsy -4242 2411 2344 8 656 457 298 145 0 chrUextra 9423308 9423556 -19581100 - OSVALDO_I LTR Gypsy -4464 2189 1906 8 656 332 137 173 27 chrUextra 9423554 9423629 -19581027 - Gypsy8_I LTR Gypsy -3330 1017 932 8 656 1492 88 15 0 chrUextra 9423618 9423822 -19580834 - Gypsy8_I LTR Gypsy -3867 480 274 8 656 784 115 32 42 chrUextra 9423790 9423980 -19580676 + DMSAT6 Satellite Satellite 200 387 -83 8 656 6916 3 1 3 chrUextra 9424080 9424855 -19579801 - R1_DM LINE R1 -3615 1741 968 8 656 3656 173 14 21 chrUextra 9424955 9425724 -19578932 + SAR_DM Satellite Satellite 355 1118 -354 8 656 6331 45 1 4 chrUextra 9425830 9426605 -19578051 - R1_DM LINE R1 -3786 1570 798 8 656 5730 21 0 1 chrUextra 9426705 9427361 -19577295 + DMRT1B LINE R1 2957 3611 -1572 8 656 1029 48 0 0 chrUextra 9427355 9427480 -19577176 + DMRT1B LINE R1 3718 3842 -1341 8 656 6812 0 13 0 chrUextra 9427582 9428355 -19576301 - ROO_I LTR Pao -7242 1014 232 8 656 7165 1 3 1 chrUextra 9428455 9429230 -19575426 + LSU-rRNA_Dme rRNA rRNA 3000 3775 -125 8 656 2729 7 7 0 chrUextra 9429330 9429630 -19575026 - MAX_I LTR Pao -7612 302 1 8 656 2909 9 0 0 chrUextra 9429630 9429951 -19574705 - MAX_LTR LTR Pao 0 321 1 8 656 400 145 0 80 chrUextra 9429967 9430042 -19574614 - HETRP_DM Satellite Satellite -286 1586 1518 8 656 7236 1 1 0 chrUextra 9430205 9430980 -19573676 + LSU-rRNA_Dme rRNA rRNA 3012 3787 -113 8 656 3784 64 37 0 chrUextra 9431080 9431624 -19573032 + PROTOP_A DNA P 570 1105 0 8 656 7075 1 1 4 chrUextra 9431955 9432730 -19571926 + LSU-rRNA_Dme rRNA rRNA 694 1466 -2434 8 656 6891 18 1 1 chrUextra 9432830 9433605 -19571051 - R2_DM LINE R2 -768 2839 2065 8 656 3087 170 35 6 chrUextra 9433708 9434480 -19570176 - SAR_DM Satellite Satellite -593 793 1 8 656 1223 298 20 20 chrUextra 9435724 9436230 -19568426 - HMSBEAGLE_I LTR Gypsy -757 5772 5267 8 656 3892 26 53 4 chrUextra 9436333 9436800 -19567856 - Gypsy12_LTR LTR Gypsy -1846 490 1 8 656 2728 13 0 3 chrUextra 9436800 9437105 -19567551 - Gypsy12_I LTR Gypsy 0 5546 5243 8 657 701 13 0 0 chrUextra 9437205 9437282 -19567374 - LSU-rRNA_Dme rRNA rRNA -1184 2716 2640 8 657 1419 7 0 0 chrUextra 9437280 9437434 -19567222 - R1_DM LINE R1 0 5356 5203 8 657 5108 2 0 2 chrUextra 9437427 9437980 -19566676 - LSU-rRNA_Dme rRNA rRNA -1243 2657 2106 8 657 2974 242 22 12 chrUextra 9438081 9438855 -19565801 - TOM_I LTR Gypsy -595 5517 4736 8 657 607 0 14 0 chrUextra 9438955 9439029 -19565627 + NTS_DM Other Other 59 133 -107 8 657 1350 18 0 6 chrUextra 9439029 9439194 -19565462 + NTS_DM Other Other 38 201 -39 8 657 21 57 0 0 chrUextra 9439194 9439229 -19565427 + AT_rich Low_complexity Low_complexity 1 35 0 8 657 898 9 9 27 chrUextra 9439255 9439366 -19565290 + NTS_DM Other Other 25 133 -107 8 657 1540 25 15 20 chrUextra 9439366 9439570 -19565086 + NTS_DM Other Other 38 240 0 8 657 1254 52 0 0 chrUextra 9439570 9439724 -19564932 + NTS_DM Other Other 1 154 -86 8 657 1338 48 0 0 chrUextra 9439924 9440090 -19564566 - Gypsy10_LTR LTR Gypsy -198 166 1 8 657 21 0 0 0 chrUextra 9440121 9440142 -19564514 + AT_rich Low_complexity Low_complexity 1 21 0 8 657 6575 27 34 0 chrUextra 9441580 9442355 -19562301 + R1_DM LINE R1 3829 4629 -727 8 657 3440 196 15 27 chrUextra 9442455 9443230 -19561426 - SAR_DM Satellite Satellite -550 765 1 8 657 7195 4 0 0 chrUextra 9443330 9444105 -19560551 + Gypsy6_I LTR Gypsy 3176 3950 -3062 8 657 6030 27 1 0 chrUextra 9444205 9444980 -19559676 - PROTOP_A DNA P -111 994 219 8 657 6718 5 0 1 chrUextra 9445080 9445855 -19558801 + SSU-rRNA_Dme rRNA rRNA 31 804 -1191 8 657 3111 184 8 14 chrUextra 9445955 9446730 -19557926 + SAR_DM Satellite Satellite 200 969 -503 8 657 6747 4 0 1 chrUextra 9446830 9447605 -19557051 - R2_DM LINE R2 -1291 2316 1543 8 657 416 113 0 0 chrUextra 9447707 9447778 -19556878 - ARS406_DM Unknown Unknown -282 71 1 8 657 3227 185 9 8 chrUextra 9447716 9448480 -19556176 + SAR_DM Satellite Satellite 224 988 -484 8 657 4924 88 3 3 chrUextra 9448586 9449355 -19555301 + MICROPIA_I LTR Gypsy 1618 2385 -1714 8 657 681 179 7 14 chrUextra 9449466 9449608 -19555048 + HETRP_DM Satellite Satellite 1529 1669 -203 8 657 24 53 0 0 chrUextra 9449615 9449653 -19555003 + AT_rich Low_complexity Low_complexity 1 38 0 8 657 625 200 7 14 chrUextra 9449741 9449883 -19554773 + HETRP_DM Satellite Satellite 1529 1669 -203 8 657 372 22 0 0 chrUextra 9450014 9450059 -19554597 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 657 489 225 8 16 chrUextra 9450059 9450181 -19554475 + HETRP_DM Satellite Satellite 1549 1669 -203 8 657 2445 199 8 9 chrUextra 9450334 9450868 -19553788 - Gypsy5_I LTR Gypsy -2691 3818 3286 8 657 2073 12 0 8 chrUextra 9450856 9451105 -19553551 + MICROPIA_I LTR Gypsy 1435 1681 -2795 8 657 6738 3 0 1 chrUextra 9451205 9451980 -19552676 + LSU-rRNA_Dme rRNA rRNA 2727 3500 -400 8 657 34 72 0 0 chrUextra 9452250 9452319 -19552337 + AT_rich Low_complexity Low_complexity 1 69 0 8 657 4622 42 83 0 chrUextra 9452955 9453730 -19550926 - PROTOP DNA P -3727 753 19 8 657 4061 12 0 47 chrUextra 9453830 9454359 -19550297 - LSU-rRNA_Dme rRNA rRNA -3395 505 2 8 657 28 79 0 0 chrUextra 9454372 9454435 -19550221 + AT_rich Low_complexity Low_complexity 1 63 0 8 657 5342 57 16 12 chrUextra 9454705 9455480 -19549176 + R2_DM LINE R2 869 1710 -1818 8 657 28 48 0 0 chrUextra 9455605 9455647 -19549009 + AT_rich Low_complexity Low_complexity 1 42 0 8 657 2143 146 65 26 chrUextra 9455654 9456291 -19548365 + Stalker2_I LTR Gypsy 291 999 -5531 8 657 2772 182 88 37 chrUextra 9456455 9457230 -19547426 + TAHRE LINE telomeric 7087 7900 -2563 8 657 1033 46 0 0 chrUextra 9457331 9457461 -19547195 + BS3_DM LINE Jockey 601 730 -1060 8 657 689 34 0 0 chrUextra 9457473 9457562 -19547094 + BS3_DM LINE Jockey 1458 1546 -244 8 657 3521 84 2 4 chrUextra 9457561 9458076 -19546580 + DM297_I LTR Gypsy 2179 2692 -3475 8 657 2725 98 33 53 chrUextra 9458205 9458692 -19545964 - R1_DM LINE R1 -4306 1050 574 8 657 970 108 29 29 chrUextra 9458693 9458865 -19545791 - R1_DM LINE R1 -5184 172 1 8 657 616 64 0 31 chrUextra 9458883 9458980 -19545676 + Gypsy6A_LTR LTR Gypsy 71 164 -256 8 657 2266 155 26 32 chrUextra 9459080 9460714 -19543942 + DMSAT6 Satellite Satellite 1 1623 -51 8 657 6734 4 0 0 chrUextra 9460830 9461605 -19543051 + R2_DM LINE R2 611 1385 -2222 8 657 392 103 0 0 chrUextra 9461807 9461865 -19542791 + FB4_DM DNA Tc1 1018 1075 -3014 8 657 865 128 5 11 chrUextra 9461892 9462081 -19542575 - S_DM DNA Tc1 0 1736 1549 8 657 22 56 0 0 chrUextra 9462192 9462228 -19542428 + AT_rich Low_complexity Low_complexity 1 36 0 8 657 6177 1 0 32 chrUextra 9463455 9464228 -19540428 - LSU-rRNA_Dme rRNA rRNA -3037 863 116 8 657 598 54 64 11 chrUextra 9464330 9464424 -19540232 + DNAREP1_DM LINE Penelope 8 106 -488 8 657 30 45 0 0 chrUextra 9464573 9464617 -19540039 + AT_rich Low_complexity Low_complexity 1 44 0 8 657 3002 181 12 12 chrUextra 9465205 9465973 -19538683 - SAR_DM Satellite Satellite -693 767 1 8 657 282 29 0 0 chrUextra 9466080 9466115 -19538541 + DNAREP1_DM LINE Penelope 553 587 -7 8 657 909 160 32 0 chrUextra 9466114 9466301 -19538355 - I_DM LINE I -3912 2319 2127 8 657 530 205 0 39 chrUextra 9466359 9466486 -19538170 - STALKER4_I LTR Gypsy -2717 3813 3692 8 657 37 52 0 0 chrUextra 9466631 9466689 -19537967 + AT_rich Low_complexity Low_complexity 1 58 0 8 657 333 176 370 0 chrUextra 9466738 9466846 -19537810 + PROTOP_B DNA P 940 1087 -66 8 657 6050 25 9 3 chrUextra 9466980 9467730 -19536926 - LSU-rRNA_Dme rRNA rRNA 0 3900 3146 8 657 1134 150 213 6 chrUextra 9467832 9468161 -19536495 + TART_B1 LINE telomeric 1844 2240 -8414 8 657 3661 7 0 7 chrUextra 9468173 9468605 -19536051 + DMRT1A LINE R1 3 431 -4752 8 657 4954 16 0 0 chrUextra 9468705 9469286 -19535370 - Invader6_I LTR Gypsy -3518 581 1 8 657 1615 21 0 0 chrUextra 9469286 9469480 -19535176 - Invader6_LTR LTR Gypsy 0 393 200 8 657 4979 60 45 20 chrUextra 9469607 9470355 -19534301 + MAX_I LTR Pao 1219 1985 -5929 8 657 2895 49 127 13 chrUextra 9470456 9471230 -19533426 + TART LINE telomeric 6794 7655 -6822 8 657 3155 70 72 2 chrUextra 9471337 9471945 -19532711 + PROTOP_A DNA P 570 1105 0 8 657 3308 164 20 12 chrUextra 9472215 9472960 -19531696 - SAR_DM Satellite Satellite -396 1076 326 8 657 3346 160 31 19 chrUextra 9473080 9473852 -19530804 - SAR_DM Satellite Satellite -425 1047 267 8 657 2499 78 30 20 chrUextra 9473960 9474724 -19529932 - DMSAT6 Satellite Satellite -69 772 1 8 657 717 18 36 27 chrUextra 9474826 9474938 -19529718 + NTS_DM Other Other 128 240 0 8 657 1847 4 17 13 chrUextra 9474938 9475177 -19529479 + NTS_DM Other Other 1 240 0 8 657 1711 17 17 21 chrUextra 9475177 9475418 -19529238 + NTS_DM Other Other 1 240 0 8 657 1352 28 6 6 chrUextra 9475418 9475600 -19529056 + NTS_DM Other Other 1 182 -58 8 657 21 36 0 0 chrUextra 9475721 9475749 -19528907 + AT_rich Low_complexity Low_complexity 1 28 0 8 657 850 18 0 27 chrUextra 9475775 9475887 -19528769 + NTS_DM Other Other 25 133 -107 8 657 1438 15 20 20 chrUextra 9475887 9476090 -19528566 + NTS_DM Other Other 38 240 0 8 657 1731 21 17 17 chrUextra 9476090 9476330 -19528326 + NTS_DM Other Other 1 240 0 8 657 1161 21 0 0 chrUextra 9476330 9476474 -19528182 + NTS_DM Other Other 1 144 -96 8 657 3450 173 9 10 chrUextra 9476574 9477345 -19527311 - SAR_DM Satellite Satellite -455 1017 248 8 657 2181 226 35 53 chrUextra 9477448 9478218 -19526438 - TAHRE LINE telomeric -2673 7790 7035 8 657 3113 0 0 3 chrUextra 9478322 9478681 -19525975 + LSU-rRNA_Dme rRNA rRNA 2296 2653 -1247 8 657 241 30 30 0 chrUextra 9478676 9478709 -19525947 + LSU-rRNA_Dme rRNA rRNA 2599 2632 -1268 8 657 3260 8 5 0 chrUextra 9478709 9479096 -19525560 + R1_DM LINE R1 1 389 -4967 8 657 5958 35 0 0 chrUextra 9479196 9479938 -19524718 - FW_DM LINE Jockey -3948 744 3 8 657 5996 31 5 7 chrUextra 9480072 9480841 -19523815 + DMRT1B LINE R1 4350 5117 -66 8 657 6366 21 0 4 chrUextra 9480944 9481718 -19522938 + R2_DM LINE R2 107 877 -2730 8 657 452 133 100 0 chrUextra 9483046 9483136 -19521520 + DNAREP1_DM LINE Penelope 496 594 0 8 657 33 25 0 0 chrUextra 9483189 9483229 -19521427 + AT_rich Low_complexity Low_complexity 1 40 0 8 657 735 52 0 10 chrUextra 9483566 9483664 -19520992 + Gypsy12_I LTR Gypsy 4563 4659 -887 8 657 2116 86 0 3 chrUextra 9483662 9483954 -19520702 + Gypsy12_I LTR Gypsy 5256 5546 0 8 657 984 154 15 30 chrUextra 9483953 9484154 -19520502 + Gypsy12_LTR LTR Gypsy 1 198 -2138 8 657 1531 16 0 11 chrUextra 9484154 9484340 -19520316 + PROTOP DNA P 1 183 -4297 8 657 628 71 0 0 chrUextra 9484444 9484527 -19520129 + ACCORD2_I LTR Gypsy 7122 7204 -8 8 657 1736 19 0 18 chrUextra 9484527 9484745 -19519911 + ACCORD2_LTR LTR Gypsy 1 214 -1 8 657 3645 34 21 0 chrUextra 9484746 9485214 -19519442 + R1_DM LINE R1 2422 2899 -2457 8 657 21 0 0 0 chrUextra 9485334 9485355 -19519301 + AT_rich Low_complexity Low_complexity 1 21 0 8 657 6414 14 22 0 chrUextra 9486188 9486962 -19517694 + FW_DM LINE Jockey 3553 4343 -349 8 657 296 71 0 0 chrUextra 9487062 9487104 -19517552 - Invader2_I LTR Gypsy -690 3902 3861 8 657 1380 101 31 8 chrUextra 9487118 9487420 -19517236 - Invader2_I LTR Gypsy -799 3793 3419 8 657 2308 39 23 0 chrUextra 9487420 9487729 -19516927 + IDEFIX_LTR LTR Gypsy 1 316 -278 8 657 21 0 0 0 chrUextra 9487729 9487750 -19516906 + AT_rich Low_complexity Low_complexity 1 21 0 8 657 683 36 0 0 chrUextra 9487752 9487836 -19516820 - CIRCE LINE Composite -1027 5329 5246 8 657 3096 178 17 21 chrUextra 9487952 9488710 -19515946 - SAR_DM Satellite Satellite -300 1172 418 8 657 441 0 58 43 chrUextra 9488810 9488879 -19515777 + NTS_DM Other Other 171 240 0 8 657 1704 21 17 21 chrUextra 9488879 9489120 -19515536 + NTS_DM Other Other 1 240 0 8 657 1850 4 17 13 chrUextra 9489120 9489359 -19515297 + NTS_DM Other Other 1 240 0 8 657 1760 0 13 13 chrUextra 9489359 9489583 -19515073 + NTS_DM Other Other 1 224 -16 8 657 6689 3 1 0 chrUextra 9489687 9490458 -19514198 + BATUMI_I LTR Pao 4852 5623 -2340 8 657 845 36 0 0 chrUextra 9490558 9490670 -19513986 + FW_DM LINE Jockey 3132 3243 -1449 8 657 3074 63 1 16 chrUextra 9490670 9491110 -19513546 - STALKER4_LTR LTR Gypsy -10 392 1 8 657 1632 14 5 5 chrUextra 9491110 9491332 -19513324 - STALKER4_I LTR Gypsy 0 6530 6309 8 657 640 193 7 14 chrUextra 9491485 9491627 -19513029 - HETRP_DM Satellite Satellite -203 1669 1529 8 657 414 258 8 8 chrUextra 9491762 9491883 -19512773 - HETRP_DM Satellite Satellite -203 1669 1549 8 657 192 40 0 0 chrUextra 9491883 9491908 -19512748 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 657 608 200 7 14 chrUextra 9492039 9492181 -19512475 - HETRP_DM Satellite Satellite -203 1669 1529 8 657 21 89 0 0 chrUextra 9492323 9492379 -19512277 + AT_rich Low_complexity Low_complexity 1 56 0 8 657 6350 10 0 0 chrUextra 9493180 9493954 -19510702 + TART LINE telomeric 8518 9291 -5186 8 657 272 69 34 17 chrUextra 9494964 9495023 -19509633 + DNAREP1_DM LINE Penelope 228 287 -307 8 657 1276 111 17 54 chrUextra 9495045 9495284 -19509372 + DNAREP1_DM LINE Penelope 360 589 -5 8 657 930 107 13 0 chrUextra 9495531 9495680 -19508976 - DMCR1A LINE CR1 -1073 3397 3247 8 657 6704 0 0 0 chrUextra 9495802 9496576 -19508080 + R2_DM LINE R2 286 1059 -2548 8 657 3429 37 0 2 chrUextra 9496750 9497179 -19507477 - ROO_LTR LTR Pao 0 428 1 8 657 26 50 0 0 chrUextra 9497214 9497254 -19507402 + AT_rich Low_complexity Low_complexity 1 40 0 8 657 6063 30 3 17 chrUextra 9497550 9498324 -19506332 + CIRCE LINE Composite 2400 3162 -3194 8 657 6130 19 3 1 chrUextra 9498424 9499198 -19505458 + PROTOP DNA P 3628 4402 -78 8 657 1037 8 8 0 chrUextra 9499301 9499425 -19505231 - DM1731_I LTR Copia -526 3450 3326 8 657 882 9 9 0 chrUextra 9499429 9499536 -19505120 - DM1731_I LTR Copia -3868 108 1 8 657 2239 36 103 0 chrUextra 9499536 9499837 -19504819 - DM1731_LTR LTR Copia 0 336 5 8 657 1413 12 0 0 chrUextra 9499837 9500000 -19504656 + (TATAA)n Simple_repeat Simple_repeat 4 166 0 8 657 606 14 0 0 chrUextra 9500000 9500071 -19504585 + (TATAA)n Simple_repeat Simple_repeat 2 72 0 8 657 3328 190 23 26 chrUextra 9500172 9500945 -19503711 - HETA LINE telomeric -1819 4262 3492 8 657 3982 5 0 0 chrUextra 9501262 9501690 -19502966 - ROO_LTR LTR Pao 0 428 1 8 657 1158 8 0 0 chrUextra 9501690 9501820 -19502836 - ROO_I LTR Pao 0 8256 8127 8 657 1618 45 70 14 chrUextra 9501920 9502262 -19502394 - ZAM_I LTR Gypsy -1347 6143 5722 8 657 3513 16 188 0 chrUextra 9502262 9502694 -19501962 + PROTOP_B DNA P 1 513 -640 8 657 3663 0 0 0 chrUextra 9502794 9503189 -19501467 + NOMAD_LTR LTR Gypsy 124 518 0 8 657 551 0 125 11 chrUextra 9503189 9503565 -19501091 + (TA)n Simple_repeat Simple_repeat 1 419 0 8 657 2155 51 64 3 chrUextra 9503669 9503964 -19500692 - G2_DM LINE Jockey -333 2769 2457 8 657 3823 56 23 0 chrUextra 9503963 9504442 -19500214 - G2_DM LINE Jockey -1090 2012 1523 8 657 2805 178 9 8 chrUextra 9504545 9505316 -19499340 - SAR_DM Satellite Satellite -675 772 1 8 657 273 57 0 0 chrUextra 9506155 9506190 -19498466 + (GAGAA)n Simple_repeat Simple_repeat 1 35 0 8 657 6431 40 16 0 chrUextra 9506290 9507064 -19497592 - R1_DM LINE R1 -3376 1980 1195 8 657 6709 23 0 5 chrUextra 9507164 9507938 -19496718 + R1_DM LINE R1 4045 4814 -542 8 657 3388 192 10 13 chrUextra 9508040 9508806 -19495850 - SAR_DM Satellite Satellite -514 958 195 8 657 1557 44 98 5 chrUextra 9508912 9509038 -19495618 - DMRT1B LINE R1 -4895 288 163 8 657 180 0 0 0 chrUextra 9509038 9509058 -19495598 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 8 657 1557 44 98 5 chrUextra 9509058 9509136 -19495520 - DMRT1B LINE R1 -5021 162 66 8 657 1207 126 6 0 chrUextra 9509134 9509316 -19495340 - DMRT1C LINE R1 -4786 657 475 8 657 3416 184 25 12 chrUextra 9509786 9510559 -19494097 + SAR_DM Satellite Satellite 195 977 -495 8 657 521 0 17 0 chrUextra 9510660 9510719 -19493937 + LSU-rRNA_Dme rRNA rRNA 3837 3896 -4 8 657 268 196 0 19 chrUextra 9510827 9510879 -19493777 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 268 196 0 19 chrUextra 9510919 9510971 -19493685 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 268 196 0 19 chrUextra 9511011 9511063 -19493593 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 278 176 0 19 chrUextra 9511094 9511146 -19493510 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 22 56 0 0 chrUextra 9511159 9511195 -19493461 + AT_rich Low_complexity Low_complexity 1 36 0 8 657 906 9 0 35 chrUextra 9511221 9511334 -19493322 + NTS_DM Other Other 25 133 -107 8 657 881 10 0 0 chrUextra 9511334 9511434 -19493222 + NTS_DM Other Other 38 137 -103 8 657 6949 4 1 1 chrUextra 9511537 9512308 -19492348 + DOC LINE Jockey 1043 1813 -2912 8 657 7153 5 0 1 chrUextra 9512408 9513182 -19491474 + DM1731_I LTR Copia 1036 1808 -2168 8 657 1694 20 0 5 chrUextra 9513282 9513482 -19491174 - Copia_I LTR Copia -4394 199 1 8 657 2449 4 0 0 chrUextra 9513482 9513758 -19490898 - Copia_LTR LTR Copia 0 276 1 8 657 2488 0 0 0 chrUextra 9513758 9514056 -19490600 + MDG3_I LTR Gypsy 4639 4936 -50 8 657 1140 21 107 0 chrUextra 9514591 9514731 -19489925 + PROTOP_A DNA P 1 155 -950 8 657 1568 87 0 5 chrUextra 9514722 9514930 -19489726 + Gypsy12_I LTR Gypsy 4651 4857 -689 8 657 6775 10 0 3 chrUextra 9515030 9515804 -19488852 + STALKER4_I LTR Gypsy 5502 6273 -257 8 657 6714 22 4 0 chrUextra 9515904 9516678 -19487978 + DMRT1A LINE R1 1357 2133 -3050 8 657 2548 86 4 39 chrUextra 9516778 9517531 -19487125 + DMSAT6 Satellite Satellite 1 727 -183 8 657 27 29 0 0 chrUextra 9517785 9517819 -19486837 + AT_rich Low_complexity Low_complexity 1 34 0 8 657 265 91 0 0 chrUextra 9518058 9518091 -19486565 + Baggins1 LINE LOA 4727 4759 -694 8 657 769 103 241 0 chrUextra 9518096 9518241 -19486415 + FB4_DM DNA Tc1 3908 4087 -2 8 657 1206 57 0 0 chrUextra 9518526 9518685 -19485971 + (CAATA)n Simple_repeat Simple_repeat 3 161 0 8 657 251 0 0 0 chrUextra 9518685 9518719 -19485937 - Copia_LTR LTR Copia 0 276 243 8 657 2456 4 0 0 chrUextra 9518719 9518995 -19485661 - Copia_LTR LTR Copia 0 276 1 8 657 2835 0 0 0 chrUextra 9518995 9519300 -19485356 - Copia_I LTR Copia 0 4593 4289 8 657 3299 191 18 27 chrUextra 9519400 9520174 -19484482 - SAR_DM Satellite Satellite -268 1204 438 8 657 2395 98 13 62 chrUextra 9520274 9521048 -19483608 + DMSAT6 Satellite Satellite 1 735 -74 8 657 3361 30 50 1 chrUextra 9521148 9521893 -19482763 + DOC3_DM LINE Jockey 3243 4023 -717 8 657 7066 9 4 0 chrUextra 9522022 9522796 -19481860 - Copia2_I LTR Copia -699 3463 2687 8 657 3149 202 15 27 chrUextra 9522896 9523664 -19480992 + SAR_DM Satellite Satellite 1 759 -216 8 657 3174 17 0 0 chrUextra 9523771 9524127 -19480529 - MDG1_LTR LTR Gypsy 0 442 87 8 657 423 100 0 0 chrUextra 9524127 9524197 -19480459 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 657 1953 6 414 0 chrUextra 9524213 9524544 -19480112 - MDG1_I LTR Gypsy 0 6596 6129 8 657 6862 16 17 0 chrUextra 9524644 9525418 -19479238 + IVK_DM LINE I 16 802 -4600 8 657 7085 4 0 0 chrUextra 9525518 9526292 -19478364 + G2_DM LINE Jockey 324 1097 -2005 8 657 2649 10 0 0 chrUextra 9526392 9526681 -19477975 + G_DM LINE Jockey 928 1216 -3130 8 657 4326 8 4 0 chrUextra 9526680 9527166 -19477490 + G_DM LINE Jockey 1342 1829 -2517 8 657 7005 0 1 1 chrUextra 9527288 9528040 -19476616 - LSU-rRNA_Dme rRNA rRNA 0 3900 3149 8 657 6661 26 1 0 chrUextra 9528140 9528914 -19475742 - R1_DM LINE R1 -2126 3230 2456 8 657 6258 57 1 7 chrUextra 9529014 9529788 -19474868 - BATUMI_I LTR Pao -3683 4280 3511 8 657 359 0 0 0 chrUextra 9529888 9529928 -19474728 - LSU-rRNA_Dme rRNA rRNA -3860 40 1 8 657 21 95 0 0 chrUextra 9529940 9530003 -19474653 + AT_rich Low_complexity Low_complexity 1 63 0 8 657 34 24 0 0 chrUextra 9530218 9530259 -19474397 + AT_rich Low_complexity Low_complexity 1 41 0 8 657 3546 174 11 19 chrUextra 9530762 9531512 -19473144 + SAR_DM Satellite Satellite 375 1118 -354 8 657 422 186 10 19 chrUextra 9531426 9531530 -19473126 - XDMR_DM Unknown Unknown 0 360 258 8 657 3566 24 108 0 chrUextra 9531636 9532410 -19472246 - ROO_I LTR Pao -1447 6809 5952 8 657 3114 46 94 0 chrUextra 9532511 9533283 -19471373 - IDEFIX_I LTR Gypsy -3209 2419 1576 8 657 1229 37 0 6 chrUextra 9533922 9534086 -19470570 + (TTCTC)n Simple_repeat Simple_repeat 2 164 0 8 657 495 0 0 0 chrUextra 9534096 9534151 -19470505 + (GAGAA)n Simple_repeat Simple_repeat 5 59 0 8 657 2635 88 39 13 chrUextra 9534256 9535029 -19469627 - DMSAT6 Satellite Satellite -41 793 1 8 657 3323 196 13 21 chrUextra 9535129 9535902 -19468754 + SAR_DM Satellite Satellite 445 1211 -261 8 657 455 159 159 0 chrUextra 9536004 9536111 -19468545 - Stalker2_I LTR Gypsy -7037 365 242 8 657 309 96 0 37 chrUextra 9536285 9536339 -19468317 - Stalker2_I LTR Gypsy -7350 52 1 8 657 3734 32 0 0 chrUextra 9536342 9536775 -19467881 + R1_DM LINE R1 1567 1999 -3357 8 657 7097 1 3 3 chrUextra 9536875 9537648 -19467008 - SSU-rRNA_Dme rRNA rRNA -215 1780 1008 8 657 6833 14 0 0 chrUextra 9537748 9538521 -19466135 + R1_DM LINE R1 2368 3140 -2216 8 657 3614 176 11 9 chrUextra 9538632 9539382 -19465274 - SAR_DM Satellite Satellite -396 1076 326 8 657 2025 4 8 0 chrUextra 9539494 9539728 -19464928 - FW_DM LINE Jockey -1845 2847 2612 8 657 4885 6 6 0 chrUextra 9539728 9540267 -19464389 - FW_DM LINE Jockey -2497 2195 1654 8 657 593 297 31 27 chrUextra 9542453 9542747 -19461909 - SAR_DM Satellite Satellite -601 871 577 8 657 334 317 24 18 chrUextra 9542608 9542772 -19461884 + XDMR Unknown Unknown 1 165 -196 8 657 6753 13 21 0 chrUextra 9542989 9543759 -19460897 + DOC2_DM LINE Jockey 2403 3188 -1605 8 657 6422 47 1 1 chrUextra 9543859 9544632 -19460024 - R1_DM LINE R1 -3786 1570 798 8 657 692 196 14 14 chrUextra 9544749 9544894 -19459762 + DMLTR5 LTR Gypsy 122 266 0 8 657 376 49 65 16 chrUextra 9544893 9544955 -19459701 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 8 657 298 277 99 73 chrUextra 9545000 9545191 -19459465 - Invader1_LTR LTR Gypsy -144 279 84 8 657 444 155 200 19 chrUextra 9545400 9545505 -19459151 + DMLTR5 LTR Gypsy 44 167 -99 8 657 1618 29 5 67 chrUextra 9545605 9545829 -19458827 + ALUII_DM Unknown Unknown 31 240 0 8 657 4743 57 2 43 chrUextra 9547495 9548124 -19456532 - CIRCE LINE Composite -5386 970 368 8 657 7016 0 1 1 chrUextra 9548224 9548997 -19455659 + DOC LINE Jockey 433 1205 -3520 8 657 2899 45 8 0 chrUextra 9549097 9549452 -19455204 - PROTOP_A DNA P -674 431 74 8 657 1929 13 17 17 chrUextra 9549998 9550238 -19454418 + NTS_DM Other Other 1 240 0 8 657 2006 0 17 13 chrUextra 9550238 9550477 -19454179 + NTS_DM Other Other 1 240 0 8 657 1976 0 17 17 chrUextra 9550477 9550717 -19453939 + NTS_DM Other Other 1 240 0 8 657 242 0 0 0 chrUextra 9550717 9550743 -19453913 + NTS_DM Other Other 1 26 -214 8 657 1431 28 0 0 chrUextra 9550843 9551019 -19453637 + (GAGAA)n Simple_repeat Simple_repeat 2 177 0 8 657 3232 201 37 5 chrUextra 9551727 9552488 -19452168 - SAR_DM Satellite Satellite -416 1056 272 8 657 6827 10 3 0 chrUextra 9552589 9553362 -19451294 - PROTOP_A DNA P -37 1068 294 8 657 1978 208 53 30 chrUextra 9553465 9553956 -19450700 - Gypsy12_LTR LTR Gypsy -1834 502 1 8 657 1596 95 201 3 chrUextra 9553956 9554235 -19450421 - Gypsy12_I LTR Gypsy 0 5546 5213 8 657 5562 81 5 10 chrUextra 9554335 9555108 -19449548 + IDEFIX_I LTR Gypsy 56 824 -4804 8 657 5093 94 60 0 chrUextra 9555208 9555981 -19448675 - TART_B1 LINE telomeric -7719 2935 2117 8 657 4879 90 71 38 chrUextra 9556081 9556854 -19447802 - Gypsy12_I LTR Gypsy -4321 1225 427 8 657 2299 15 7 11 chrUextra 9556959 9557235 -19447421 + BLASTOPIA_LTR LTR Gypsy 1 275 0 8 657 1182 21 28 0 chrUextra 9557235 9557360 -19447296 - NTS_DM Other Other -111 129 1 8 657 2006 0 17 13 chrUextra 9557360 9557599 -19447057 - NTS_DM Other Other 0 240 1 8 657 936 0 31 24 chrUextra 9557599 9557726 -19446930 - NTS_DM Other Other 0 240 113 8 657 3554 181 14 17 chrUextra 9557828 9558597 -19446059 + SAR_DM Satellite Satellite 278 1044 -428 8 657 6683 21 1 8 chrUextra 9558700 9559473 -19445183 - Gypsy6_I LTR Gypsy -4768 2244 1477 8 657 5290 5 0 0 chrUextra 9559573 9560150 -19444506 + ROO_I LTR Pao 4072 4648 -3608 8 657 1911 0 0 0 chrUextra 9560136 9560346 -19444310 + ROO_I LTR Pao 6285 6494 -1762 8 657 3260 182 36 27 chrUextra 9560446 9561219 -19443437 - SAR_DM Satellite Satellite -293 1179 400 8 657 6396 49 0 1 chrUextra 9561319 9562079 -19442577 + BS2 LINE Jockey 3285 4043 -678 8 657 2382 169 49 17 chrUextra 9562343 9562965 -19441691 + TART LINE telomeric 8952 9434 -5043 8 657 5962 18 0 1 chrUextra 9563089 9563769 -19440887 + PROTOP DNA P 3802 4480 0 8 657 552 16 0 0 chrUextra 9563769 9563831 -19440825 - DMRT1A LINE R1 -3076 2107 2046 8 657 6002 10 1 3 chrUextra 9564007 9564711 -19439945 - ROVER-I_DM LTR Gypsy -1253 5331 4629 8 657 3980 5 0 0 chrUextra 9565684 9566116 -19438540 - DOC2_DM LINE Jockey -819 3974 3543 8 657 3121 11 6 0 chrUextra 9566104 9566457 -19438199 - DOC2_DM LINE Jockey -2054 2739 2385 8 657 263 272 73 85 chrUextra 9567150 9567327 -19437329 - Invader1_LTR LTR Gypsy -55 368 194 8 657 7203 0 0 0 chrUextra 9567430 9568203 -19436453 - BARI_DM DNA Tc1 -774 954 182 8 658 1074 16 0 16 chrUextra 9568303 9568431 -19436225 - CIRCE LINE Composite -2715 3641 3516 8 658 448 125 14 0 chrUextra 9568523 9568595 -19436061 - Gypsy8_LTR LTR Gypsy -231 73 1 8 658 1097 85 6 41 chrUextra 9568597 9568768 -19435888 - Invader2_I LTR Gypsy -567 4025 3861 8 658 1500 96 26 23 chrUextra 9568782 9569072 -19435584 - Invader2_I LTR Gypsy -799 3793 3434 8 658 925 17 0 78 chrUextra 9569176 9569305 -19435351 - DM176_LTR LTR Gypsy -388 119 1 8 658 277 161 51 0 chrUextra 9569305 9569413 -19435243 + MDG1_I LTR Gypsy 773 886 -5710 8 658 4048 46 44 0 chrUextra 9569427 9569949 -19434707 + MDG1_I LTR Gypsy 1193 1737 -4859 8 658 6857 9 3 9 chrUextra 9570049 9570822 -19433834 + LSU-rRNA_Dme rRNA rRNA 2189 2956 -944 8 658 2605 104 19 8 chrUextra 9570922 9571695 -19432961 + DMSAT6 Satellite Satellite 1 781 0 8 658 3583 186 14 8 chrUextra 9572668 9573438 -19431218 - SAR_DM Satellite Satellite -397 1075 301 8 658 2963 49 0 0 chrUextra 9573542 9573912 -19430744 + MAX_I LTR Pao 7545 7914 0 8 658 1513 123 163 0 chrUextra 9573915 9574191 -19430465 + MAX_LTR LTR Pao 1 321 0 8 658 529 219 8 0 chrUextra 9574191 9574314 -19430342 + SAR_DM Satellite Satellite 626 749 -723 8 658 5983 0 0 0 chrUextra 9574414 9575068 -19429588 + G_DM LINE Jockey 3690 4343 -3 8 658 232 179 0 0 chrUextra 9575148 9575187 -19429469 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2582 8 658 3790 5 0 0 chrUextra 9575505 9575922 -19428734 + TIRANT_LTR LTR Gypsy 1 417 0 8 658 1158 14 14 0 chrUextra 9575922 9576060 -19428596 + TIRANT_I LTR Gypsy 1 140 -7552 8 658 7219 1 5 0 chrUextra 9576160 9576933 -19427723 + Gypsy6_I LTR Gypsy 4813 5589 -1423 8 658 6460 9 107 7 chrUextra 9577033 9577806 -19426850 - DOC2_DM LINE Jockey -3 4790 3940 8 658 2515 109 14 16 chrUextra 9577906 9578679 -19425977 + DMSAT6 Satellite Satellite 1 771 0 8 658 1087 172 30 22 chrUextra 9578779 9579010 -19425646 + DM412B_LTR LTR Gypsy 208 440 -131 8 658 3445 43 0 19 chrUextra 9579050 9579481 -19425175 + G5A_DM LINE Jockey 2419 2841 0 8 658 275 83 0 0 chrUextra 9579514 9579550 -19425106 - BS2 LINE Jockey -4260 461 426 8 658 2934 130 41 39 chrUextra 9579652 9580237 -19424419 + PROTOP_A DNA P 520 1105 0 8 658 7176 0 1 0 chrUextra 9580525 9581298 -19423358 + STALKER4_I LTR Gypsy 3864 4637 -1893 8 658 1836 37 180 0 chrUextra 9581629 9581873 -19422783 + PROTOP_A DNA P 1 288 -817 8 658 1234 53 91 0 chrUextra 9581877 9582171 -19422485 + PROTOP_B DNA P 532 754 -399 8 658 6895 5 8 1 chrUextra 9582271 9583044 -19421612 - Gypsy3_I LTR Gypsy -4161 2016 1239 8 658 6583 30 5 0 chrUextra 9583144 9583917 -19420739 - R1_DM LINE R1 -2457 2899 2123 8 658 2781 0 3 0 chrUextra 9584017 9584317 -19420339 - NOMAD_I LTR Gypsy -2215 4357 4057 8 658 4458 2 0 2 chrUextra 9584308 9584790 -19419866 - NOMAD_I LTR Gypsy -5132 1440 960 8 658 6529 25 1 0 chrUextra 9584890 9585643 -19419013 + R1_DM LINE R1 4313 5066 -290 8 658 6811 19 0 0 chrUextra 9585763 9586536 -19418120 - R1_DM LINE R1 -698 4658 3886 8 658 1350 18 0 6 chrUextra 9586662 9586827 -19417829 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9586879 9586991 -19417665 + NTS_DM Other Other 25 133 -107 8 658 1350 18 0 6 chrUextra 9586991 9587156 -19417500 + NTS_DM Other Other 38 201 -39 8 658 1415 23 0 22 chrUextra 9587208 9587389 -19417267 + NTS_DM Other Other 25 201 -39 8 658 4252 94 20 28 chrUextra 9588382 9589150 -19415506 + HETA LINE telomeric 1 677 -5404 8 658 396 0 0 0 chrUextra 9589331 9589376 -19415280 + Copia2_LTR_DM LTR Copia 154 198 0 8 658 5889 11 0 1 chrUextra 9589376 9590028 -19414628 + Copia2_I LTR Copia 1 651 -3511 8 658 6637 27 1 1 chrUextra 9591001 9591774 -19412882 + R1_DM LINE R1 2517 3289 -2067 8 658 788 33 339 0 chrUextra 9591874 9591995 -19412661 - R1_DM LINE R1 -1848 3508 3347 8 658 5563 35 8 0 chrUextra 9591991 9592647 -19412009 - R1_DM LINE R1 -2696 2660 2000 8 658 5552 17 21 0 chrUextra 9592747 9593378 -19411278 - IVK_DM LINE I -4758 644 1 8 658 508 221 0 14 chrUextra 9593378 9593520 -19411136 + TABOR_I LTR Gypsy 3157 3296 -3040 8 658 3429 182 17 23 chrUextra 9593624 9594393 -19410263 - SAR_DM Satellite Satellite -300 1172 409 8 658 3465 187 17 23 chrUextra 9594493 9595258 -19409398 + SAR_DM Satellite Satellite 1 760 -217 8 658 6237 42 35 1 chrUextra 9595365 9596136 -19408520 + R1_DM LINE R1 895 1691 -3665 8 658 209 174 114 19 chrUextra 9596668 9596826 -19407830 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 8 658 3827 168 9 8 chrUextra 9597125 9597876 -19406780 + SAR_DM Satellite Satellite 325 1076 -396 8 658 740 216 6 19 chrUextra 9598119 9598275 -19406381 + HETRP_DM Satellite Satellite 1529 1682 -190 8 658 751 203 6 19 chrUextra 9598436 9598592 -19406064 + HETRP_DM Satellite Satellite 1529 1682 -190 8 658 3233 194 15 19 chrUextra 9598853 9599625 -19405031 - SAR_DM Satellite Satellite -593 768 1 8 658 2708 53 0 3 chrUextra 9599725 9600082 -19404574 - BATUMI_I LTR Pao -305 7658 7303 8 658 3116 34 8 10 chrUextra 9600105 9600494 -19404162 + BATUMI_I LTR Pao 6427 6814 -1149 8 658 7028 9 4 0 chrUextra 9600597 9601369 -19403287 + Copia2_I LTR Copia 2580 3354 -808 8 658 7009 5 1 0 chrUextra 9601470 9602241 -19402415 + R1_DM LINE R1 4034 4805 -551 8 658 5517 37 41 1 chrUextra 9602341 9603113 -19401543 + R1_DM LINE R1 2245 3085 -2271 8 658 3746 179 10 9 chrUextra 9603213 9603983 -19400673 + SAR_DM Satellite Satellite 267 1037 -435 8 658 1425 271 93 63 chrUextra 9604107 9604831 -19399825 - Gypsy12_LTR LTR Gypsy -1187 1149 404 8 658 6594 25 7 0 chrUextra 9604957 9605729 -19398927 - R1_DM LINE R1 -2172 3184 2408 8 658 646 13 0 0 chrUextra 9605829 9605906 -19398750 + NTS_DM Other Other 57 133 -107 8 658 1350 18 0 6 chrUextra 9605906 9606071 -19398585 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9606123 9606235 -19398421 + NTS_DM Other Other 25 133 -107 8 658 1350 18 0 6 chrUextra 9606235 9606400 -19398256 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9606452 9606564 -19398092 + NTS_DM Other Other 25 133 -107 8 658 318 0 27 0 chrUextra 9606564 9606601 -19398055 + NTS_DM Other Other 38 75 -165 8 658 3336 184 17 30 chrUextra 9606701 9607473 -19397183 - SAR_DM Satellite Satellite -255 1217 456 8 658 3207 207 16 21 chrUextra 9607573 9608345 -19396311 + SAR_DM Satellite Satellite 1 767 -224 8 658 4726 40 45 5 chrUextra 9608445 9609027 -19395629 - DMCR1A LINE CR1 -2784 1686 1082 8 658 233 289 57 36 chrUextra 9608993 9609133 -19395523 - Gypsy5_I LTR Gypsy -2421 4088 3946 8 658 5865 56 19 3 chrUextra 9609317 9610089 -19394567 + R1_DM LINE R1 172 956 -4400 8 658 1254 40 0 7 chrUextra 9610189 9610342 -19394314 - NTS_DM Other Other -88 152 1 8 658 1516 25 20 20 chrUextra 9610342 9610545 -19394111 - NTS_DM Other Other 0 240 38 8 658 917 18 0 27 chrUextra 9610545 9610657 -19393999 - NTS_DM Other Other -107 133 25 8 658 1350 18 0 6 chrUextra 9610709 9610874 -19393782 - NTS_DM Other Other -39 201 38 8 658 731 12 0 0 chrUextra 9610874 9610958 -19393698 - NTS_DM Other Other -107 133 50 8 658 3784 176 16 9 chrUextra 9611061 9611833 -19392823 + SAR_DM Satellite Satellite 252 1028 -444 8 658 6285 9 0 4 chrUextra 9611933 9612705 -19391951 + Invader2_I LTR Gypsy 3437 4205 -387 8 658 1394 0 0 12 chrUextra 9612805 9612972 -19391684 + R1_DM LINE R1 5192 5356 0 8 658 5247 2 2 2 chrUextra 9612970 9613577 -19391079 + LSU-rRNA_Dme rRNA rRNA 2640 3246 -654 8 658 6337 8 0 4 chrUextra 9613677 9614449 -19390207 - HETA LINE telomeric -356 5725 4957 8 658 6546 5 1 5 chrUextra 9614557 9615321 -19389335 + MICROPIA_I LTR Gypsy 2976 3736 -740 8 658 4530 24 7 45 chrUextra 9615421 9616022 -19388634 - CIRCE LINE Composite -5778 578 1 8 658 1426 23 0 0 chrUextra 9616022 9616193 -19388463 - CIRCE LINE Composite 0 6356 6186 8 658 1608 10 0 60 chrUextra 9616293 9616510 -19388146 - ROO_I LTR Pao -8052 204 1 8 658 3766 0 0 0 chrUextra 9616510 9616938 -19387718 - ROO_LTR LTR Pao 0 428 1 8 658 3343 177 7 10 chrUextra 9618037 9618806 -19385850 - SAR_DM Satellite Satellite -515 957 192 8 658 3922 39 0 0 chrUextra 9618909 9619400 -19385256 - CIRCE LINE Composite -5865 491 1 8 658 2170 43 0 4 chrUextra 9619404 9619681 -19384975 - CIRCE LINE Composite -4 6352 6077 8 658 301 87 0 0 chrUextra 9619781 9619827 -19384829 - ARS406_DM Unknown Unknown -307 46 1 8 658 3405 177 13 7 chrUextra 9619787 9620553 -19384103 + SAR_DM Satellite Satellite 246 1016 -456 8 658 6538 0 1 0 chrUextra 9620653 9621425 -19383231 + TABOR_I LTR Gypsy 1077 1849 -4487 8 658 479 122 100 0 chrUextra 9622134 9622224 -19382432 + DNAREP1_DM LINE Penelope 496 594 0 8 658 6682 1 0 0 chrUextra 9622397 9623169 -19381487 + R1_DM LINE R1 1445 2216 -3140 8 658 1262 54 0 0 chrUextra 9623269 9623437 -19381219 - FW_DM LINE Jockey -4524 168 1 8 658 4941 22 0 0 chrUextra 9623445 9624041 -19380615 + R1_DM LINE R1 1377 1972 -3384 8 658 1391 0 0 0 chrUextra 9624141 9624303 -19380353 - ROO_LTR LTR Pao -266 162 1 8 658 3036 0 31 0 chrUextra 9624303 9624686 -19379970 - ROO_I LTR Pao 0 8256 7862 8 658 1749 22 0 0 chrUextra 9624688 9624913 -19379743 - DOC LINE Jockey 0 4725 4501 8 658 25 0 0 0 chrUextra 9626021 9626046 -19378610 + AT_rich Low_complexity Low_complexity 1 25 0 8 658 2066 41 4 0 chrUextra 9626388 9626657 -19377999 + IDEFIX_I LTR Gypsy 1 270 -5358 8 658 6514 0 1 0 chrUextra 9626757 9627529 -19377127 - ROO_I LTR Pao -3036 5220 4448 8 658 3461 174 10 10 chrUextra 9627630 9628401 -19376255 + SAR_DM Satellite Satellite 246 1016 -456 8 658 702 0 0 12 chrUextra 9628501 9628587 -19376069 + LSU-rRNA_Dme rRNA rRNA 1704 1788 -2112 8 658 5555 2 0 2 chrUextra 9628632 9629273 -19375383 + LSU-rRNA_Dme rRNA rRNA 1788 2427 -1473 8 658 4312 2 0 0 chrUextra 9629373 9629869 -19374787 + LSU-rRNA_Dme rRNA rRNA 2086 2581 -1319 8 658 2422 4 0 0 chrUextra 9629867 9630145 -19374511 + R2_DM LINE R2 1540 1817 -1790 8 658 3199 179 11 9 chrUextra 9630250 9631000 -19373656 - SAR_DM Satellite Satellite -396 1076 326 8 658 6664 0 1 0 chrUextra 9631117 9631889 -19372767 - ROO_I LTR Pao -5305 2951 2179 8 658 4712 149 0 0 chrUextra 9631995 9632761 -19371895 + HMSBEAGLE_I LTR Gypsy 3191 3956 -2573 8 658 6279 31 0 0 chrUextra 9632861 9633633 -19371023 - R1_DM LINE R1 -2049 3307 2536 8 658 769 11 11 0 chrUextra 9633735 9633829 -19370827 - R1_DM LINE R1 -5261 95 1 8 658 5830 1 0 3 chrUextra 9633829 9634505 -19370151 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1959 8 658 4232 85 40 25 chrUextra 9634605 9635377 -19369279 + STALKER4_I LTR Gypsy 761 1544 -4986 8 658 253 57 0 0 chrUextra 9635479 9635514 -19369142 + ARS406_DM Unknown Unknown 124 158 -195 8 658 644 63 53 0 chrUextra 9635511 9635606 -19369050 + ARS406_DM Unknown Unknown 90 189 -164 8 658 2995 180 17 10 chrUextra 9635521 9636228 -19368428 - SAR_DM Satellite Satellite -569 903 192 8 658 710 95 9 0 chrUextra 9636133 9636249 -19368407 + ARS406_DM Unknown Unknown 1 117 -236 8 658 3557 2 149 0 chrUextra 9636349 9636826 -19367830 + ACCORD_LTR LTR Gypsy 11 558 0 8 658 2440 10 3 0 chrUextra 9636826 9637121 -19367535 + ACCORD_I LTR Gypsy 1 296 -5992 8 658 1985 8 0 0 chrUextra 9637401 9637641 -19367015 - ALUII_DM Unknown Unknown 0 240 1 8 658 21 57 0 0 chrUextra 9637641 9637676 -19366980 + AT_rich Low_complexity Low_complexity 1 35 0 8 658 22 35 0 0 chrUextra 9637873 9637902 -19366754 + AT_rich Low_complexity Low_complexity 1 29 0 8 658 946 92 8 19 chrUextra 9638093 9638864 -19365792 + RSP Satellite Satellite 1 762 0 8 658 2225 239 42 35 chrUextra 9638965 9639707 -19364949 - ROVER-I_DM LTR Gypsy -4289 2295 1549 8 658 263 0 0 0 chrUextra 9639837 9639867 -19364789 - DM1731_LTR LTR Copia -306 30 1 8 658 6212 4 7 7 chrUextra 9639867 9640609 -19364047 - DM1731_I LTR Copia 0 3976 3235 8 658 6577 1 0 0 chrUextra 9640709 9641481 -19363175 - DM412 LTR Gypsy -1379 5518 4747 8 658 24 32 0 0 chrUextra 9641602 9641633 -19363023 + AT_rich Low_complexity Low_complexity 1 31 0 8 658 6495 14 0 0 chrUextra 9642456 9643225 -19361431 + R1_DM LINE R1 3905 4673 -683 8 658 2361 185 9 7 chrUextra 9643326 9643882 -19360774 + SAR_DM Satellite Satellite 267 823 -649 8 658 6577 1 1 0 chrUextra 9644197 9644969 -19359687 + ROO_I LTR Pao 1219 1991 -6265 8 658 6667 5 0 0 chrUextra 9645069 9645841 -19358815 + MAX_I LTR Pao 1631 2402 -5512 8 658 3327 176 10 10 chrUextra 9645943 9646713 -19357943 + SAR_DM Satellite Satellite 237 1006 -466 8 658 6593 4 0 1 chrUextra 9646813 9647585 -19357071 - DOC LINE Jockey -1318 3407 2637 8 658 6720 0 4 0 chrUextra 9647685 9648457 -19356199 + LSU-rRNA_Dme rRNA rRNA 3066 3840 -60 8 658 5994 14 16 10 chrUextra 9649429 9650201 -19354455 + QUASIMODO_I LTR Gypsy 1267 2042 -4018 8 658 3029 193 12 15 chrUextra 9650301 9651073 -19353583 - SAR_DM Satellite Satellite -593 769 1 8 658 2202 49 0 14 chrUextra 9651173 9651464 -19353192 - DMCR1A LINE CR1 -3914 556 270 8 658 2329 4 0 4 chrUextra 9652045 9652315 -19352341 - BEL_I LTR Pao -5135 269 1 8 658 3118 6 0 0 chrUextra 9652315 9652676 -19351980 - BEL_LTR LTR Pao 0 361 1 8 658 245 125 46 15 chrUextra 9653407 9653472 -19351184 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 658 2916 194 23 18 chrUextra 9653789 9654561 -19350095 - SAR_DM Satellite Satellite -259 1213 438 8 658 1557 17 0 0 chrUextra 9654670 9654850 -19349806 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 658 499 56 56 0 chrUextra 9655533 9655604 -19349052 + R1_DM LINE R1 716 790 -4566 8 658 5316 57 1 4 chrUextra 9655601 9656305 -19348351 + R1_DM LINE R1 897 1598 -3758 8 658 6301 19 21 0 chrUextra 9656405 9657177 -19347479 + R1_DM LINE R1 2383 3170 -2186 8 658 1167 7 0 0 chrUextra 9657531 9657666 -19346990 - 5S_DM RNA RNA 0 135 1 8 658 1167 7 0 0 chrUextra 9657890 9658025 -19346631 - 5S_DM RNA RNA 0 135 1 8 658 2227 0 0 0 chrUextra 9658149 9658401 -19346255 + ROO_LTR LTR Pao 177 428 0 8 658 1578 27 0 0 chrUextra 9658402 9658921 -19345735 + (TTA)n Simple_repeat Simple_repeat 1 519 0 8 658 895 129 0 0 chrUextra 9659021 9659160 -19345496 + FW_DM LINE Jockey 2985 3123 -1569 8 658 2141 83 5 44 chrUextra 9659198 9659793 -19344863 - DMSAT6 Satellite Satellite -3 571 1 8 658 6700 1 1 1 chrUextra 9659893 9660665 -19343991 - SSU-rRNA_Dme rRNA rRNA -776 1219 448 8 658 257 65 0 61 chrUextra 9660765 9660814 -19343842 + (TAA)n Simple_repeat Simple_repeat 3 48 0 8 658 1371 145 93 13 chrUextra 9660816 9661116 -19343540 + MDG1_LTR LTR Gypsy 89 412 -30 8 658 1402 173 39 2 chrUextra 9661117 9661537 -19343119 + BS3_DM LINE Jockey 1 221 -1569 8 658 3104 177 12 19 chrUextra 9661637 9662384 -19342272 + SAR_DM Satellite Satellite 378 1119 -353 8 658 316 177 40 50 chrUextra 9662307 9662408 -19342248 - XDMR_DM Unknown Unknown -9 351 252 8 658 5499 55 4 13 chrUextra 9662508 9663279 -19341377 - BATUMI_I LTR Pao -4302 3661 2898 8 658 6261 19 0 0 chrUextra 9663379 9664150 -19340506 - PROTOP_A DNA P -5 1100 330 8 658 1006 181 45 9 chrUextra 9664250 9664998 -19339658 + SAR_DM Satellite Satellite 1 774 -680 8 658 359 138 92 0 chrUextra 9665811 9665876 -19338780 - G3_DM LINE Jockey -4026 579 509 8 658 2171 4 0 0 chrUextra 9665992 9666246 -19338410 - DOC LINE Jockey -2031 2694 2441 8 658 2096 194 16 18 chrUextra 9666242 9666763 -19337893 + SAR_DM Satellite Satellite 1 520 -411 8 658 1378 199 152 35 chrUextra 9666943 9667424 -19337232 + Gypsy12_LTR LTR Gypsy 1158 1694 -642 8 658 1379 122 9 14 chrUextra 9667413 9667629 -19337027 + Gypsy12_I LTR Gypsy 223 437 -5109 8 658 6545 32 3 0 chrUextra 9667734 9668505 -19336151 + R1_DM LINE R1 4221 4993 -363 8 658 7026 3 0 0 chrUextra 9668605 9669376 -19335280 - DM412 LTR Gypsy -3901 2996 2226 8 658 3675 171 9 17 chrUextra 9669477 9670233 -19334423 + SAR_DM Satellite Satellite 369 1118 -354 8 658 366 182 33 22 chrUextra 9670157 9670247 -19334409 - XDMR_DM Unknown Unknown -10 350 260 8 658 3694 187 5 7 chrUextra 9670350 9671118 -19333538 - SAR_DM Satellite Satellite -514 958 192 8 658 6788 10 0 1 chrUextra 9671218 9671989 -19332667 - STALKER4_I LTR Gypsy -4572 1958 1189 8 658 2780 64 0 0 chrUextra 9672089 9672434 -19332222 + R1_DM LINE R1 1449 1793 -3563 8 658 2119 156 0 68 chrUextra 9672435 9672833 -19331823 + R1_DM LINE R1 310 680 -4676 8 658 5674 18 1 1 chrUextra 9672960 9673641 -19331015 + IDEFIX_I LTR Gypsy 4948 5628 0 8 658 739 33 0 0 chrUextra 9673641 9673731 -19330925 + IDEFIX_LTR LTR Gypsy 1 90 -504 8 658 5222 73 64 5 chrUextra 9673831 9674428 -19330228 - IDEFIX_I LTR Gypsy -4372 1256 631 8 658 183 42 0 0 chrUextra 9674428 9674452 -19330204 + (TAA)n Simple_repeat Simple_repeat 3 26 0 8 658 5222 73 64 5 chrUextra 9674452 9674602 -19330054 - IDEFIX_I LTR Gypsy -4998 630 467 8 658 6517 28 0 12 chrUextra 9676444 9677215 -19327441 + FW_DM LINE Jockey 959 1720 -2972 8 658 623 32 21 11 chrUextra 9677315 9677410 -19327246 + NTS_DM Other Other 106 201 -39 8 658 936 9 0 27 chrUextra 9677462 9677574 -19327082 + NTS_DM Other Other 25 133 -107 8 658 1320 18 0 12 chrUextra 9677574 9677740 -19326916 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9677792 9677904 -19326752 + NTS_DM Other Other 25 133 -107 8 658 1350 18 0 6 chrUextra 9677904 9678069 -19326587 + NTS_DM Other Other 38 201 -39 8 658 6212 53 8 4 chrUextra 9678186 9678957 -19325699 + IDEFIX_I LTR Gypsy 2259 3032 -2596 8 658 401 0 0 0 chrUextra 9679057 9679101 -19325555 - QUASIMODO_LTR LTR Gypsy -613 45 2 8 658 401 103 15 0 chrUextra 9679101 9679169 -19325487 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 658 237 232 0 0 chrUextra 9679246 9679315 -19325341 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 658 21 0 0 0 chrUextra 9679417 9679438 -19325218 + AT_rich Low_complexity Low_complexity 1 21 0 8 658 277 253 90 50 chrUextra 9679511 9679611 -19325045 + DNAREP1_DM LINE Penelope 489 592 -2 8 658 2565 91 20 19 chrUextra 9679928 9680666 -19323990 - DMSAT6 Satellite Satellite -14 738 1 8 658 7120 5 1 0 chrUextra 9680800 9681570 -19323086 - Copia2_I LTR Copia -571 3591 2821 8 658 1776 46 160 0 chrUextra 9682204 9682441 -19322215 + PROTOP DNA P 1 275 -4205 8 658 2589 173 14 9 chrUextra 9682541 9683312 -19321344 + SAR_DM Satellite Satellite 1 774 -677 8 658 3536 19 7 16 chrUextra 9683412 9683931 -19320725 - ROO_I LTR Pao -7648 608 1 8 658 2349 4 0 0 chrUextra 9683931 9684183 -19320473 - ROO_LTR LTR Pao 0 428 177 8 658 1317 19 0 0 chrUextra 9684283 9684437 -19320219 + R1_DM LINE R1 2616 2769 -2587 8 658 5462 19 0 0 chrUextra 9684435 9685054 -19319602 + R1_DM LINE R1 3040 3658 -1698 8 658 6856 16 0 0 chrUextra 9685154 9685925 -19318731 + FW_DM LINE Jockey 1285 2055 -2637 8 658 374 0 0 0 chrUextra 9686025 9686068 -19318588 + NOMAD_I LTR Gypsy 6530 6572 0 8 658 4777 2 0 0 chrUextra 9686068 9686586 -19318070 + NOMAD_LTR LTR Gypsy 1 518 0 8 658 1131 74 10 10 chrUextra 9686586 9686796 -19317860 - Stalker2_I LTR Gypsy -1279 6123 6002 8 658 418 206 0 10 chrUextra 9686896 9686994 -19317662 + DMLTR5 LTR Gypsy 170 266 0 8 658 347 93 661 14 chrUextra 9686993 9687125 -19317531 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 8 658 3218 14 0 13 chrUextra 9687767 9688139 -19316517 + FW_DM LINE Jockey 2120 2486 -2206 8 658 3578 7 0 0 chrUextra 9688135 9688538 -19316118 + FW_DM LINE Jockey 2608 3010 -1682 8 658 1158 122 0 0 chrUextra 9688638 9688972 -19315684 + (TA)n Simple_repeat Simple_repeat 1 334 0 8 658 1179 117 0 0 chrUextra 9688972 9689152 -19315504 + (CATA)n Simple_repeat Simple_repeat 1 180 0 8 658 2014 24 8 12 chrUextra 9689158 9689408 -19315248 + BLASTOPIA_LTR LTR Gypsy 1 249 -26 8 658 2515 62 9 3 chrUextra 9689509 9689830 -19314826 + Gypsy10_LTR LTR Gypsy 42 364 0 8 658 3085 73 11 33 chrUextra 9689830 9690280 -19314376 + Gypsy10_I LTR Gypsy 1 440 -4838 8 658 359 21 21 0 chrUextra 9690380 9690428 -19314228 - G4_DM LINE Jockey -91 3765 3717 8 658 1225 21 0 0 chrUextra 9690426 9690566 -19314090 - G4_DM LINE Jockey -267 3589 3450 8 658 1790 256 22 29 chrUextra 9690564 9691151 -19313505 + TOM_I LTR Gypsy 1817 2399 -3713 8 658 1388 246 24 11 chrUextra 9691262 9691640 -19313016 + BS LINE Jockey 2416 2798 -2328 8 658 326 185 122 12 chrUextra 9691890 9691972 -19312684 + BS LINE Jockey 3142 3232 -1894 8 658 3251 98 27 23 chrUextra 9692124 9692638 -19312018 + I_DM LINE I 3820 4335 -1896 8 658 5111 10 0 13 chrUextra 9692993 9693596 -19311060 - Gypsy4_I LTR Gypsy -5693 595 1 8 658 1491 18 6 0 chrUextra 9693596 9693764 -19310892 - Gypsy4_LTR LTR Gypsy 0 287 119 8 658 3289 3 0 3 chrUextra 9694279 9694635 -19310021 - ROO_LTR LTR Pao 0 428 74 8 658 6532 3 3 3 chrUextra 9694735 9695506 -19309150 - ROVER-I_DM LTR Gypsy -141 6443 5673 8 658 3141 156 70 3 chrUextra 9695606 9696373 -19308283 - TAHRE LINE telomeric -4591 1490 504 8 658 4570 78 2 3 chrUextra 9696477 9697084 -19307572 + HOBO DNA hAT 345 950 -2066 8 658 578 64 13 0 chrUextra 9697085 9697163 -19307493 + HOBO DNA hAT 1100 1178 -1838 8 658 3404 185 19 23 chrUextra 9697351 9698118 -19306538 - SAR_DM Satellite Satellite -593 764 1 8 658 1394 31 0 0 chrUextra 9698219 9698379 -19306277 + Invader2_LTR LTR Gypsy 107 266 0 8 658 5147 5 23 2 chrUextra 9698379 9698990 -19305666 + Invader2_I LTR Gypsy 1 624 -3968 8 82 1234 171 24 9 chrUextra 9699090 9699415 -19305241 - SAR_DM Satellite Satellite -865 329 1 8 659 1030 184 32 11 chrUextra 9699426 9699861 -19304795 - SAR_DM Satellite Satellite -683 443 1 8 659 2654 101 4 29 chrUextra 9699961 9700728 -19303928 + DMSAT6 Satellite Satellite 1 747 -29 8 659 534 119 36 0 chrUextra 9701122 9701206 -19303450 - NTS_DM Other Other -150 90 4 8 659 1389 6 0 18 chrUextra 9701316 9701481 -19303175 - NTS_DM Other Other -78 162 1 8 659 872 17 33 25 chrUextra 9701481 9701603 -19303053 - NTS_DM Other Other 0 240 118 8 659 6949 4 3 1 chrUextra 9701703 9702474 -19302182 - BS LINE Jockey -2628 2498 1727 8 659 6426 21 84 0 chrUextra 9702574 9703345 -19301311 - R1_DM LINE R1 -170 5186 4351 8 659 5963 50 9 8 chrUextra 9703445 9704212 -19300444 - MDG1_I LTR Gypsy -428 6168 5401 8 659 2321 55 10 3 chrUextra 9704332 9704640 -19300016 + IDEFIX_I LTR Gypsy 5319 5628 0 8 659 3850 25 0 0 chrUextra 9704640 9705087 -19299569 + IDEFIX_LTR LTR Gypsy 1 447 -147 8 659 1810 10 5 0 chrUextra 9705187 9705391 -19299265 + FW_DM LINE Jockey 1989 2193 -2499 8 659 5013 9 9 0 chrUextra 9705390 9705958 -19298698 + FW_DM LINE Jockey 2600 3172 -1520 8 659 7043 1 1 4 chrUextra 9706058 9706829 -19297827 - SSU-rRNA_Dme rRNA rRNA -625 1370 602 8 659 5933 53 25 14 chrUextra 9706929 9707700 -19296956 + TART LINE telomeric 94 872 -13605 8 659 468 0 0 0 chrUextra 9707800 9707852 -19296804 + (CACAA)n Simple_repeat Simple_repeat 5 56 0 8 659 6458 7 0 0 chrUextra 9707852 9708571 -19296085 - DMRT1B LINE R1 -140 5043 4325 8 659 7187 0 1 1 chrUextra 9708671 9709442 -19295214 + LSU-rRNA_Dme rRNA rRNA 2817 3587 -313 8 659 6989 1 3 0 chrUextra 9709542 9710312 -19294344 - ACCORD2_I LTR Gypsy -968 6244 5473 8 659 1440 0 0 0 chrUextra 9711284 9711444 -19293212 + (TCTA)n Simple_repeat Simple_repeat 3 162 0 8 659 4298 0 0 0 chrUextra 9712155 9712613 -19292043 + TABOR_LTR LTR Gypsy 49 506 0 8 659 1821 89 93 0 chrUextra 9712613 9712926 -19291730 - TART_B1 LINE telomeric -8141 2513 2172 8 659 3689 59 2 4 chrUextra 9713026 9713486 -19291170 - R1_DM LINE R1 -4818 538 80 8 659 2355 22 15 0 chrUextra 9713528 9713797 -19290859 - R1_DM LINE R1 0 5356 5084 8 659 623 292 44 82 chrUextra 9713898 9714466 -19290190 + BURDOCK_I LTR Gypsy 3147 4198 -2374 8 659 2412 101 22 30 chrUextra 9714770 9715539 -19289117 + DMSAT6 Satellite Satellite 1 763 -256 8 659 2923 12 0 3 chrUextra 9715639 9715969 -19288687 + DM176_LTR LTR Gypsy 179 507 0 8 659 3839 12 0 0 chrUextra 9715980 9716410 -19288246 + DM176_LTR LTR Gypsy 1 430 -77 8 659 4830 11 0 0 chrUextra 9716513 9717053 -19287603 + PROTOP_A DNA P 566 1105 0 8 659 264 176 0 19 chrUextra 9717091 9717143 -19287513 - HMSBEAGLE_I LTR Gypsy -6308 221 171 8 659 376 49 65 16 chrUextra 9717157 9717219 -19287437 - HMSBEAGLE_I LTR Gypsy -6464 65 1 8 659 286 130 0 18 chrUextra 9717218 9717273 -19287383 - DMLTR5 LTR Gypsy 0 266 213 8 659 754 209 6 19 chrUextra 9717513 9717669 -19286987 - HETRP_DM Satellite Satellite -190 1682 1529 8 659 684 197 13 32 chrUextra 9717823 9717980 -19286676 - HETRP_DM Satellite Satellite -190 1682 1529 8 659 268 196 0 19 chrUextra 9718325 9718377 -19286279 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 268 196 0 19 chrUextra 9718417 9718469 -19286187 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 268 196 0 19 chrUextra 9718509 9718561 -19286095 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 278 176 0 19 chrUextra 9718592 9718644 -19286012 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 22 56 0 0 chrUextra 9718657 9718693 -19285963 + AT_rich Low_complexity Low_complexity 1 36 0 8 659 915 18 0 27 chrUextra 9718719 9718831 -19285825 + NTS_DM Other Other 25 133 -107 8 659 1284 37 0 6 chrUextra 9718831 9718996 -19285660 + NTS_DM Other Other 38 201 -39 8 659 3146 60 5 17 chrUextra 9720113 9720519 -19284137 - Baggins1 LINE LOA -262 5191 4791 8 659 6519 30 3 1 chrUextra 9720865 9721636 -19283020 - R1_DM LINE R1 -1513 3843 3072 8 659 1118 0 8 0 chrUextra 9721736 9721864 -19282792 - R1_DM LINE R1 -1202 4154 4026 8 659 5443 34 5 0 chrUextra 9721866 9722507 -19282149 - R1_DM LINE R1 -1679 3677 3034 8 659 6447 17 0 0 chrUextra 9722608 9723378 -19281278 - R2_DM LINE R2 -2314 1293 524 8 659 6465 19 0 0 chrUextra 9723478 9724249 -19280407 - R1_DM LINE R1 -637 4719 3949 8 659 2055 4 0 0 chrUextra 9724349 9724586 -19280070 - SSU-rRNA_Dme rRNA rRNA -1758 237 1 8 659 32 0 0 0 chrUextra 9724718 9724750 -19279906 + AT_rich Low_complexity Low_complexity 1 32 0 8 659 28 48 0 0 chrUextra 9725078 9725120 -19279536 + AT_rich Low_complexity Low_complexity 1 42 0 8 659 2549 176 5 12 chrUextra 9725229 9725991 -19278665 - SAR_DM Satellite Satellite -396 756 1 8 659 2550 7 3 0 chrUextra 9726091 9726390 -19278266 - Invader1_LTR LTR Gypsy -123 300 1 8 659 3924 8 2 0 chrUextra 9726390 9726861 -19277795 - Invader1_I LTR Gypsy 0 3186 2715 8 659 2274 221 48 10 chrUextra 9726964 9727658 -19276998 - DM297_I LTR Gypsy -2257 3910 3191 8 659 3340 12 12 0 chrUextra 9727831 9728233 -19276423 - PROTOP_A DNA P -698 407 1 8 659 2471 88 22 6 chrUextra 9728233 9728598 -19276058 - Gypsy2_I LTR Gypsy -338 5797 5427 8 659 1597 343 5 5 chrUextra 9728702 9729469 -19275187 + GTWIN_I LTR Gypsy 3200 3966 -2455 8 659 6026 42 8 1 chrUextra 9729571 9730341 -19274315 + R1_DM LINE R1 2760 3534 -1822 8 659 2498 101 5 17 chrUextra 9731326 9732081 -19272575 + DMSAT6 Satellite Satellite 1 745 -74 8 659 817 0 0 0 chrUextra 9732181 9732277 -19272379 - NTS_DM Other Other -107 133 38 8 659 832 9 9 27 chrUextra 9732277 9732388 -19272268 - NTS_DM Other Other -107 133 25 8 659 21 57 0 0 chrUextra 9732414 9732449 -19272207 + AT_rich Low_complexity Low_complexity 1 35 0 8 659 1252 18 0 6 chrUextra 9732449 9732614 -19272042 - NTS_DM Other Other -39 201 38 8 659 852 18 0 27 chrUextra 9732614 9732726 -19271930 - NTS_DM Other Other -107 133 25 8 659 1215 18 6 6 chrUextra 9732778 9732942 -19271714 - NTS_DM Other Other -39 201 38 8 659 321 264 6 15 chrUextra 9733569 9733699 -19270957 - Gypsy4_I LTR Gypsy -2980 3308 3232 8 659 3235 182 22 12 chrUextra 9733923 9734691 -19269965 - SAR_DM Satellite Satellite -435 1037 262 8 659 3032 190 7 11 chrUextra 9734794 9735529 -19269127 - SAR_DM Satellite Satellite -549 923 192 8 659 751 103 0 16 chrUextra 9735433 9735561 -19269095 + ARS406_DM Unknown Unknown 1 126 -227 8 659 6077 27 1 4 chrUextra 9735661 9736431 -19268225 - R1_DM LINE R1 -1295 4061 3294 8 659 27 29 0 0 chrUextra 9736688 9736722 -19267934 + AT_rich Low_complexity Low_complexity 1 34 0 8 659 752 37 0 115 chrUextra 9737045 9737167 -19267489 + Baggins1 LINE LOA 5346 5453 0 8 659 1503 72 3 0 chrUextra 9737661 9738030 -19266626 + (CAAGA)n Simple_repeat Simple_repeat 1 370 0 8 659 347 283 0 0 chrUextra 9738317 9738423 -19266233 + Copia2_I LTR Copia 567 672 -3490 8 659 2979 67 0 9 chrUextra 9739142 9739565 -19265091 + R1_DM LINE R1 193 611 -4745 8 659 1631 66 0 0 chrUextra 9739567 9739780 -19264876 + R1_DM LINE R1 1247 1459 -3897 8 659 911 25 8 0 chrUextra 9739791 9739911 -19264745 + R1_DM LINE R1 1556 1676 -3680 8 659 2776 165 20 8 chrUextra 9740011 9740621 -19264035 + SAR_DM Satellite Satellite 287 903 -569 8 659 884 93 53 0 chrUextra 9740628 9740778 -19263878 - ARS406_DM Unknown Unknown -195 158 1 8 659 21 95 0 0 chrUextra 9740883 9740946 -19263710 + AT_rich Low_complexity Low_complexity 1 63 0 8 659 34 24 0 0 chrUextra 9741159 9741200 -19263456 + AT_rich Low_complexity Low_complexity 1 41 0 8 659 4540 55 43 0 chrUextra 9741861 9742513 -19262143 + PROTOP DNA P 74 753 -3727 8 659 3113 180 10 18 chrUextra 9742621 9743391 -19261265 - SAR_DM Satellite Satellite -1033 763 1 8 659 3181 183 10 12 chrUextra 9743493 9744261 -19260395 + SAR_DM Satellite Satellite 234 1000 -472 8 659 6480 0 1 0 chrUextra 9744368 9745131 -19259525 + MDG3_I LTR Gypsy 3297 4060 -926 8 659 6105 12 47 9 chrUextra 9745231 9746001 -19258655 - R2_DM LINE R2 -2382 1225 427 8 659 2267 189 13 108 chrUextra 9746105 9746871 -19257785 - SAR_DM Satellite Satellite -281 1191 499 8 659 3443 205 21 0 chrUextra 9747013 9747741 -19256915 + HETA LINE telomeric 1130 1872 -4209 8 659 4764 2 0 0 chrUextra 9747841 9748386 -19256270 - DOC LINE Jockey -4180 545 1 8 659 1656 9 27 0 chrUextra 9748387 9748611 -19256045 + PROTOP_A DNA P 629 858 -247 8 659 5864 29 0 17 chrUextra 9748711 9749481 -19255175 - CIRCE LINE Composite -1483 4873 4117 8 659 3361 2 2 0 chrUextra 9749581 9750027 -19254629 - QUASIMODO_I LTR Gypsy -57 6003 5557 8 659 2632 3 0 3 chrUextra 9750025 9750351 -19254305 - QUASIMODO_I LTR Gypsy -1356 4704 4380 8 659 6519 9 5 0 chrUextra 9750451 9751221 -19253435 + R2_DM LINE R2 282 1055 -2552 8 659 21 89 0 0 chrUextra 9751802 9751858 -19252798 + AT_rich Low_complexity Low_complexity 1 56 0 8 659 1856 0 5 0 chrUextra 9751877 9752091 -19252565 - SSU-rRNA_Dme rRNA rRNA 0 1995 1781 8 659 3116 210 23 23 chrUextra 9752191 9753816 -19250840 - SAR_DM Satellite Satellite -1082 1624 1 8 659 977 117 6 12 chrUextra 9753931 9754104 -19250552 + SAR_DM Satellite Satellite 732 903 -569 8 659 2327 196 9 7 chrUextra 9754119 9754699 -19249957 + SAR_DM Satellite Satellite 496 1076 -396 8 659 4994 111 0 1 chrUextra 9754801 9755569 -19249087 - HETA LINE telomeric -3282 2799 2033 8 659 5929 31 5 3 chrUextra 9755671 9756441 -19248215 - NINJA_I LTR Pao -4958 1053 282 8 659 2623 136 18 10 chrUextra 9756541 9757308 -19247348 - G2_DM LINE Jockey -2794 308 4 8 659 4518 129 48 1 chrUextra 9757411 9758179 -19246477 - DMRT1B LINE R1 -4345 838 35 8 659 201 121 0 0 chrUextra 9758506 9758539 -19246117 + (TC)n Simple_repeat Simple_repeat 1 33 0 8 659 28 48 0 0 chrUextra 9759417 9759459 -19245197 + AT_rich Low_complexity Low_complexity 1 42 0 8 659 488 119 36 0 chrUextra 9759731 9759815 -19244841 - NTS_DM Other Other -150 90 4 8 659 6593 1 0 0 chrUextra 9760021 9760791 -19243865 + ROO_I LTR Pao 1311 2080 -6176 8 659 930 75 8 20 chrUextra 9760895 9761642 -19243014 + RSP Satellite Satellite 1 738 0 8 659 4386 25 0 5 chrUextra 9761761 9762320 -19242336 + CIRCE LINE Composite 4425 4980 -1376 8 659 569 338 23 16 chrUextra 9762651 9763019 -19241637 + GTWIN_I LTR Gypsy 3254 3538 -2883 8 659 6325 29 0 1 chrUextra 9764373 9765141 -19239515 - MAX_I LTR Pao -3125 4789 4023 8 659 840 9 0 35 chrUextra 9765244 9765357 -19239299 - NTS_DM Other Other -107 133 25 8 659 22 56 0 0 chrUextra 9765383 9765419 -19239237 + AT_rich Low_complexity Low_complexity 1 36 0 8 659 255 125 0 0 chrUextra 9765432 9765472 -19239184 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765515 9765555 -19239101 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765607 9765647 -19239009 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765699 9765739 -19238917 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765791 9765831 -19238825 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 29 28 0 0 chrUextra 9765836 9765872 -19238784 + AT_rich Low_complexity Low_complexity 1 36 0 8 659 551 0 15 0 chrUextra 9765944 9766011 -19238645 - LSU-rRNA_Dme rRNA rRNA 0 3900 3833 8 659 28 48 0 0 chrUextra 9766156 9766198 -19238458 + AT_rich Low_complexity Low_complexity 1 42 0 8 659 2044 142 85 22 chrUextra 9766205 9766831 -19237825 + Stalker2_I LTR Gypsy 291 999 -5531 8 659 4238 44 66 5 chrUextra 9766981 9767751 -19236905 - BATUMI_I LTR Pao -2502 5461 4645 8 659 1422 0 0 0 chrUextra 9767851 9768009 -19236647 + (CACAA)n Simple_repeat Simple_repeat 4 161 0 8 659 5907 35 21 4 chrUextra 9768721 9769491 -19235165 + IDEFIX_I LTR Gypsy 2441 3223 -2405 8 659 1620 43 0 3 chrUextra 9769803 9770151 -19234505 + (CAAGA)n Simple_repeat Simple_repeat 1 346 0 8 659 5584 21 0 4 chrUextra 9770523 9771231 -19233425 - CIRCE LINE Composite -1376 4980 4276 8 659 6114 8 5 1 chrUextra 9771331 9772101 -19232555 + STALKER4_I LTR Gypsy 5643 6415 -115 8 659 4525 61 11 26 chrUextra 9772201 9772859 -19231797 - DMCR1A LINE CR1 -1000 3470 2823 8 659 877 36 0 0 chrUextra 9772859 9772970 -19231686 - DMCR1A LINE CR1 -1870 2600 2490 8 659 6225 32 0 0 chrUextra 9773071 9773841 -19230815 + MAX_I LTR Pao 5048 5817 -2097 8 659 2250 132 41 12 chrUextra 9773944 9774700 -19229956 + DMSAT6 Satellite Satellite 1 777 -97 8 659 3203 186 11 8 chrUextra 9774813 9775578 -19229078 - SAR_DM Satellite Satellite -411 1061 295 8 659 668 179 7 14 chrUextra 9775693 9775835 -19228821 + HETRP_DM Satellite Satellite 1529 1669 -203 8 659 655 186 7 14 chrUextra 9775998 9776140 -19228516 + HETRP_DM Satellite Satellite 1529 1669 -203 8 659 643 186 7 14 chrUextra 9776282 9776424 -19228232 + HETRP_DM Satellite Satellite 1529 1669 -203 8 659 3467 166 13 13 chrUextra 9776551 9777321 -19227335 + SAR_DM Satellite Satellite 268 1037 -435 8 659 3624 176 13 10 chrUextra 9777422 9778191 -19226465 - SAR_DM Satellite Satellite -435 1037 267 8 659 3829 170 9 9 chrUextra 9778291 9779061 -19225595 + SAR_DM Satellite Satellite 256 1025 -447 8 659 6381 39 36 0 chrUextra 9779161 9779931 -19224725 - Baggins1 LINE LOA -3802 1651 854 8 659 7060 5 0 1 chrUextra 9780031 9780801 -19223855 + FW_DM LINE Jockey 3492 4260 -432 8 659 6596 30 9 1 chrUextra 9780901 9781671 -19222985 - NINJA_I LTR Pao -2385 3626 2851 8 659 21 0 0 0 chrUextra 9781924 9781945 -19222711 + AT_rich Low_complexity Low_complexity 1 21 0 8 659 2311 100 9 5 chrUextra 9782195 9782541 -19222115 + IDEFIX_I LTR Gypsy 13 300 -5328 8 659 6304 24 3 1 chrUextra 9782687 9783411 -19221245 - R1_DM LINE R1 0 5356 4632 8 659 6919 10 0 0 chrUextra 9783511 9784281 -19220375 - Invader2_I LTR Gypsy -2994 1598 829 8 659 7207 1 0 0 chrUextra 9784381 9785151 -19219505 - LSU-rRNA_Dme rRNA rRNA -418 3482 2713 8 659 6689 30 0 0 chrUextra 9785251 9786021 -19218635 - R1_DM LINE R1 -2046 3310 2541 8 659 1445 35 223 0 chrUextra 9786122 9786319 -19218337 - PROTOP DNA P -4239 241 1 8 659 2556 95 31 23 chrUextra 9786993 9787761 -19216895 + DMSAT6 Satellite Satellite 1 773 -71 8 659 237 108 0 0 chrUextra 9787960 9787997 -19216659 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 659 6528 1 0 34 chrUextra 9788731 9789501 -19215155 + LSU-rRNA_Dme rRNA rRNA 108 851 -3049 8 659 1237 73 6 0 chrUextra 9789601 9789765 -19214891 - R1_DM LINE R1 -5191 165 1 8 659 4980 25 2 3 chrUextra 9789798 9790367 -19214289 - R1_DM LINE R1 0 5356 4789 8 659 253 202 12 23 chrUextra 9790517 9790603 -19214053 + (TAA)n Simple_repeat Simple_repeat 2 86 0 8 659 544 244 45 12 chrUextra 9790610 9790773 -19213883 + Gypsy_I LTR Gypsy 859 983 -5524 8 659 4002 2 0 0 chrUextra 9790773 9791201 -19213455 - ROO_LTR LTR Pao 0 428 1 8 659 347 0 25 0 chrUextra 9791201 9791241 -19213415 - ROO_I LTR Pao 0 8256 8216 8 659 1572 0 0 0 chrUextra 9791341 9791512 -19213144 - ROO_LTR LTR Pao -257 171 1 8 659 5480 5 0 0 chrUextra 9791512 9792111 -19212545 + DOC LINE Jockey 2341 2939 -1786 8 659 6846 9 3 3 chrUextra 9792211 9792981 -19211675 + Invader2_I LTR Gypsy 672 1441 -3151 8 659 6392 35 44 1 chrUextra 9793081 9793850 -19210806 + R1_DM LINE R1 1297 2098 -3258 8 659 6691 21 0 0 chrUextra 9793950 9794719 -19209937 - NINJA_I LTR Pao -4846 1165 397 8 659 811 330 34 65 chrUextra 9794824 9795587 -19209069 - MICROPIA_I LTR Gypsy -3331 1145 407 8 659 6971 8 1 0 chrUextra 9795688 9796457 -19208199 + TART LINE telomeric 11797 12566 -1911 8 659 637 0 0 0 chrUextra 9796557 9796630 -19208026 - Copia2_LTR_DM LTR Copia -124 74 2 8 659 1448 18 0 5 chrUextra 9796630 9796851 -19207805 + (TTA)n Simple_repeat Simple_repeat 1 220 0 8 659 1589 134 45 36 chrUextra 9796872 9797099 -19207557 + Jockey2 LINE Jockey 3089 3318 -110 8 659 987 32 0 0 chrUextra 9797099 9797222 -19207434 + (TTA)n Simple_repeat Simple_repeat 3 125 0 8 659 1589 134 45 36 chrUextra 9797222 9797326 -19207330 + Jockey2 LINE Jockey 3319 3423 -5 8 659 2749 191 55 26 chrUextra 9797426 9798195 -19206461 + SAR_DM Satellite Satellite 458 1248 -224 8 659 3054 145 131 13 chrUextra 9798298 9798849 -19205807 - DMRT1C LINE R1 -70 5373 4758 8 659 783 147 8 0 chrUextra 9798865 9798994 -19205662 - DMRT1C LINE R1 -796 4647 4518 8 659 361 65 0 0 chrUextra 9798995 9799041 -19205615 + DMCR1A LINE CR1 777 822 -3648 8 659 3218 190 16 22 chrUextra 9800033 9800802 -19203854 + SAR_DM Satellite Satellite 444 1207 -265 8 659 5555 17 2 5 chrUextra 9800902 9801539 -19203117 + R1_DM LINE R1 3648 4282 -1074 8 659 1016 18 0 0 chrUextra 9801559 9801671 -19202985 + R1_DM LINE R1 4407 4518 -838 8 659 6880 19 3 1 chrUextra 9801771 9802540 -19202116 - Copia2_I LTR Copia -1626 2536 1767 8 659 6622 35 0 3 chrUextra 9802640 9803409 -19201247 - DMCR1A LINE CR1 -2233 2237 1471 8 659 3378 181 12 24 chrUextra 9803523 9804277 -19200379 + SAR_DM Satellite Satellite 369 1113 -359 8 659 3420 49 7 10 chrUextra 9804378 9805147 -19199509 + MICROPIA_I LTR Gypsy 1410 2145 -2331 8 659 624 26 13 0 chrUextra 9805247 9805325 -19199331 - ARS406_DM Unknown Unknown -185 168 90 8 659 3063 188 18 25 chrUextra 9805322 9806016 -19198640 + SAR_DM Satellite Satellite 1 689 -203 8 659 201 132 0 0 chrUextra 9806325 9806363 -19198293 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 659 7192 3 0 0 chrUextra 9806985 9807754 -19196902 - SSU-rRNA_Dme rRNA rRNA -1029 966 198 8 659 1620 0 0 0 chrUextra 9808382 9808621 -19196035 + (TAGA)n Simple_repeat Simple_repeat 1 239 0 8 659 479 0 0 0 chrUextra 9808724 9808777 -19195879 - R1_DM LINE R1 -5303 53 1 8 659 260 30 30 0 chrUextra 9808777 9808810 -19195846 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 8 659 6413 1 0 0 chrUextra 9808805 9809492 -19195164 - LSU-rRNA_Dme rRNA rRNA -1247 2653 1967 8 659 3232 0 0 0 chrUextra 9809592 9809937 -19194719 + LSU-rRNA_Dme rRNA rRNA 2288 2632 -1268 8 659 3866 5 5 0 chrUextra 9809937 9810361 -19194295 + R1_DM LINE R1 1 426 -4930 8 659 319 197 101 38 chrUextra 9810461 9810540 -19194116 - DNAREP1_DM LINE Penelope -135 459 376 8 659 2927 69 71 2 chrUextra 9810758 9811151 -19193505 - Gypsy6A_LTR LTR Gypsy 0 420 1 8 659 6840 10 1 3 chrUextra 9812199 9812968 -19191688 + G_DM LINE Jockey 1342 2109 -2237 8 659 491 238 8 24 chrUextra 9813068 9813193 -19191463 + HETRP_DM Satellite Satellite 1560 1682 -190 8 659 707 190 11 69 chrUextra 9813296 9813471 -19191185 + HETRP_DM Satellite Satellite 1518 1682 -190 8 659 282 29 0 0 chrUextra 9813588 9813623 -19191033 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 659 542 220 15 22 chrUextra 9813623 9813758 -19190898 + HETRP_DM Satellite Satellite 1549 1682 -190 8 659 3132 19 33 0 chrUextra 9813937 9814298 -19190358 + DMRT1B LINE R1 4572 4944 -239 8 659 3669 10 2 2 chrUextra 9814296 9814706 -19189950 + DMRT1A LINE R1 1684 2093 -3090 8 659 6871 9 1 1 chrUextra 9815676 9816444 -19188212 - R1_DM LINE R1 -1175 4181 3414 8 659 3280 194 18 25 chrUextra 9817413 9818181 -19186475 + SAR_DM Satellite Satellite 1 762 -225 8 659 3244 179 20 24 chrUextra 9818283 9819046 -19185610 + SAR_DM Satellite Satellite 352 1111 -361 8 659 6976 7 1 0 chrUextra 9819151 9819920 -19184736 - IVK_DM LINE I -2326 3076 2307 8 659 3648 177 12 10 chrUextra 9820020 9820789 -19183867 - SAR_DM Satellite Satellite -447 1025 256 8 659 4661 92 105 3 chrUextra 9820889 9821591 -19183065 + TART LINE telomeric 6897 7670 -6807 8 659 21 0 0 0 chrUextra 9821815 9821836 -19182820 + AT_rich Low_complexity Low_complexity 1 21 0 8 659 1207 149 106 32 chrUextra 9821836 9822174 -19182482 + Invader1_LTR LTR Gypsy 1 423 0 8 659 289 271 55 47 chrUextra 9822174 9822302 -19182354 + MICROPIA_I LTR Gypsy 1 129 -4347 8 659 251 365 6 6 chrUextra 9822348 9822527 -19182129 + MICROPIA_I LTR Gypsy 910 1088 -3388 8 659 255 150 0 0 chrUextra 9822637 9822677 -19181979 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 659 266 196 0 19 chrUextra 9822717 9822769 -19181887 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 255 196 0 19 chrUextra 9822809 9822861 -19181795 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 265 150 0 0 chrUextra 9822913 9822953 -19181703 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 659 266 196 0 19 chrUextra 9822993 9823045 -19181611 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 266 196 0 19 chrUextra 9823180 9823232 -19181424 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 6919 21 0 0 chrUextra 9823496 9824265 -19180391 + DIVER_I LTR Pao 1720 2488 -3155 8 659 970 0 0 0 chrUextra 9824365 9824468 -19180188 - ROO_I LTR Pao -8153 103 1 8 659 3955 2 0 5 chrUextra 9824468 9824898 -19179758 - ROO_LTR LTR Pao 0 428 1 8 659 1263 50 0 14 chrUextra 9824912 9825134 -19179522 + (CTTAT)n Simple_repeat Simple_repeat 1 219 0 8 659 554 0 0 16 chrUextra 9825234 9825298 -19179358 + IDEFIX_I LTR Gypsy 5566 5628 0 8 659 4741 7 61 0 chrUextra 9825298 9825858 -19178798 + IDEFIX_LTR LTR Gypsy 1 594 0 8 659 3664 162 14 27 chrUextra 9826103 9826870 -19177786 + SAR_DM Satellite Satellite 334 1090 -382 8 659 6942 13 0 0 chrUextra 9826972 9827741 -19176915 + Gypsy4_I LTR Gypsy 481 1249 -5039 8 659 3182 172 11 61 chrUextra 9827841 9828594 -19176062 + SAR_DM Satellite Satellite 405 1119 -353 8 659 401 200 0 20 chrUextra 9828508 9828610 -19176046 - XDMR_DM Unknown Unknown 0 360 261 8 659 3299 176 7 19 chrUextra 9828710 9829337 -19175319 + SAR_DM Satellite Satellite 1 720 -393 8 659 438 220 0 9 chrUextra 9829337 9829447 -19175209 - XDMR_DM Unknown Unknown 0 360 252 8 659 3299 176 7 19 chrUextra 9829447 9829479 -19175177 + SAR_DM Satellite Satellite 721 759 -354 8 659 6967 8 1 1 chrUextra 9829579 9830348 -19174308 - R1_DM LINE R1 -866 4490 3722 8 660 4064 83 112 33 chrUextra 9831318 9831976 -19172680 - Gypsy12_I LTR Gypsy -4836 710 1 8 660 641 138 18 0 chrUextra 9831976 9832085 -19172571 - Gypsy12A_LTR LTR Gypsy 0 2280 2170 8 660 1234 24 0 6 chrUextra 9833075 9833240 -19171416 - NTS_DM Other Other -39 201 38 8 660 870 9 0 27 chrUextra 9833240 9833352 -19171304 - NTS_DM Other Other -107 133 25 8 660 22 56 0 0 chrUextra 9833378 9833414 -19171242 + AT_rich Low_complexity Low_complexity 1 36 0 8 660 230 150 0 0 chrUextra 9833427 9833467 -19171189 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 246 150 0 0 chrUextra 9833510 9833550 -19171106 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 246 150 0 0 chrUextra 9833602 9833642 -19171014 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 246 150 0 0 chrUextra 9833694 9833734 -19170922 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 22 56 0 0 chrUextra 9833739 9833775 -19170881 + AT_rich Low_complexity Low_complexity 1 36 0 8 660 2133 0 4 0 chrUextra 9833924 9834177 -19170479 - Copia_I LTR Copia -4339 254 1 8 660 232 0 0 0 chrUextra 9834177 9834211 -19170445 - Copia_LTR LTR Copia 0 276 243 8 660 2286 4 0 0 chrUextra 9834211 9834487 -19170169 - Copia_LTR LTR Copia 0 276 1 8 660 333 68 0 0 chrUextra 9834793 9834837 -19169819 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 8 660 1620 0 0 0 chrUextra 9834837 9835017 -19169639 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 660 2176 159 49 180 chrUextra 9835662 9836431 -19168225 - TAHRE LINE telomeric -2715 7748 7044 8 660 6725 0 3 0 chrUextra 9836531 9837300 -19167356 - LSU-rRNA_Dme rRNA rRNA -73 3827 3057 8 660 205 191 0 0 chrUextra 9837463 9837505 -19167151 + A-rich Low_complexity Low_complexity 1 42 0 8 660 275 260 9 71 chrUextra 9837633 9837745 -19166911 + MDG1_I LTR Gypsy 1358 1462 -5134 8 660 669 199 133 21 chrUextra 9837859 9838169 -19166487 + MDG1_I LTR Gypsy 1661 2076 -4520 8 660 3151 40 32 9 chrUextra 9838273 9838714 -19165942 + QUASIMODO_LTR LTR Gypsy 49 658 0 8 660 2233 42 16 0 chrUextra 9838727 9839038 -19165618 + IDEFIX_I LTR Gypsy 4442 4757 -871 8 660 34 24 0 0 chrUextra 9839713 9839754 -19164902 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 6003 27 1 1 chrUextra 9840037 9840776 -19163880 + R1_DM LINE R1 4583 5321 -35 8 660 6354 19 1 1 chrUextra 9840876 9841645 -19163011 - DMRT1A LINE R1 -598 4585 3817 8 660 6036 0 4 7 chrUextra 9841745 9842514 -19162142 - DM412 LTR Gypsy -5300 1597 831 8 660 6497 8 1 1 chrUextra 9842614 9843383 -19161273 - R1_DM LINE R1 -866 4490 3722 8 660 1891 4 4 0 chrUextra 9843483 9843708 -19160948 + R1_DM LINE R1 4841 5066 -290 8 660 934 35 0 0 chrUextra 9843705 9843819 -19160837 + R1_DM LINE R1 5243 5356 0 8 660 2190 65 7 7 chrUextra 9843852 9844161 -19160495 + R1_DM LINE R1 1 309 -5047 8 660 708 64 0 0 chrUextra 9844158 9844252 -19160404 + R1_DM LINE R1 1503 1596 -3760 8 660 2687 96 128 28 chrUextra 9844356 9845120 -19159536 - Gypsy12_I LTR Gypsy -4557 989 149 8 660 1278 35 12 0 chrUextra 9845221 9845393 -19159263 + TART LINE telomeric 3455 3628 -7026 8 660 4063 61 42 0 chrUextra 9845391 9845990 -19158666 + TART LINE telomeric 1 558 -13919 8 660 5280 27 0 0 chrUextra 9846090 9846730 -19157926 + R1_DM LINE R1 4194 4833 -523 8 660 1062 16 0 0 chrUextra 9846730 9846858 -19157798 - Stalker3_LTR LTR Gypsy 0 372 245 8 660 324 179 0 0 chrUextra 9846963 9847041 -19157615 + (AATAG)n Simple_repeat Simple_repeat 2 79 0 8 660 2025 0 0 0 chrUextra 9848126 9848366 -19156290 - ALUII_DM Unknown Unknown 0 240 1 8 660 21 57 0 0 chrUextra 9848366 9848401 -19156255 + AT_rich Low_complexity Low_complexity 1 35 0 8 660 1679 0 0 0 chrUextra 9849566 9849768 -19154888 - QUASIMODO_LTR LTR Gypsy -455 203 2 8 660 401 103 15 0 chrUextra 9849768 9849836 -19154820 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 660 276 231 0 0 chrUextra 9849912 9849990 -19154666 + (TA)n Simple_repeat Simple_repeat 2 79 0 8 660 22 0 0 0 chrUextra 9850084 9850106 -19154550 + AT_rich Low_complexity Low_complexity 1 22 0 8 660 236 253 90 50 chrUextra 9850179 9850279 -19154377 + DNAREP1_DM LINE Penelope 489 592 -2 8 660 6318 19 1 1 chrUextra 9850435 9851203 -19153453 - R1_DM LINE R1 -765 4591 3824 8 660 3076 194 15 23 chrUextra 9851307 9852064 -19152592 + SAR_DM Satellite Satellite 1 750 -208 8 660 34 24 0 0 chrUextra 9852421 9852462 -19152194 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 3508 167 19 10 chrUextra 9853042 9853811 -19150845 + SAR_DM Satellite Satellite 248 1023 -449 8 660 2979 184 48 16 chrUextra 9853911 9854678 -19149978 - SAR_DM Satellite Satellite -399 1073 282 8 660 5135 21 86 1 chrUextra 9854780 9855549 -19149107 - MAX_I LTR Pao -613 7301 6468 8 660 6673 0 0 0 chrUextra 9855649 9856418 -19148238 + G_DM LINE Jockey 1067 1835 -2511 8 660 1641 10 0 0 chrUextra 9856518 9856717 -19147939 - IDEFIX_LTR LTR Gypsy -395 199 1 8 660 4254 21 9 7 chrUextra 9856717 9857287 -19147369 - IDEFIX_I LTR Gypsy 0 5628 5058 8 660 6105 3 0 33 chrUextra 9858255 9859023 -19145633 - LSU-rRNA_Dme rRNA rRNA -3031 869 127 8 660 5928 21 0 5 chrUextra 9859139 9859891 -19144765 - CIRCE LINE Composite -1376 4980 4233 8 660 6583 4 0 5 chrUextra 9859991 9860759 -19143897 - MICROPIA_I LTR Gypsy -1224 3252 2489 8 660 6159 27 0 3 chrUextra 9860859 9861627 -19143029 - R1_DM LINE R1 -2021 3335 2570 8 660 3837 22 137 0 chrUextra 9861727 9862489 -19142167 + STALKER4_I LTR Gypsy 3925 4790 -1740 8 660 5089 60 4 13 chrUextra 9862595 9863362 -19141294 + I_DM LINE I 835 1594 -4637 8 660 1453 234 36 55 chrUextra 9863465 9864224 -19140432 + SAR_DM Satellite Satellite 1 744 -396 8 660 954 0 0 0 chrUextra 9864331 9864440 -19140216 + SSU-rRNA_Dme rRNA rRNA 1887 1995 0 8 660 21 89 0 0 chrUextra 9864459 9864515 -19140141 + AT_rich Low_complexity Low_complexity 1 56 0 8 660 3402 159 23 25 chrUextra 9865199 9865967 -19138689 - SAR_DM Satellite Satellite -439 1033 267 8 660 5935 4 4 7 chrUextra 9866067 9866768 -19137888 + DM1731_I LTR Copia 3278 3976 0 8 660 553 15 0 0 chrUextra 9866768 9866835 -19137821 + DM1731_LTR LTR Copia 1 67 -269 8 660 3309 171 10 19 chrUextra 9866935 9867703 -19136953 - SAR_DM Satellite Satellite -1095 760 1 8 660 5954 14 31 0 chrUextra 9867803 9868571 -19136085 - IDEFIX_I LTR Gypsy -144 5484 4693 8 660 5152 97 30 1 chrUextra 9868671 9869437 -19135219 + R1_DM LINE R1 1169 1956 -3400 8 660 21 0 0 0 chrUextra 9869886 9869907 -19134749 + AT_rich Low_complexity Low_complexity 1 21 0 8 660 3557 24 0 0 chrUextra 9870407 9870865 -19133791 - PROTOP DNA P -221 4259 3802 8 660 1999 45 54 0 chrUextra 9870860 9871174 -19133482 - PROTOP DNA P -3657 823 493 8 660 2318 194 50 14 chrUextra 9871299 9872042 -19132614 + Gypsy8_I LTR Gypsy 1035 1404 -2943 8 660 2726 3 0 9 chrUextra 9872143 9872469 -19132187 - SSU-rRNA_Dme rRNA rRNA -1672 323 1 8 660 32 0 0 0 chrUextra 9872601 9872633 -19132023 + AT_rich Low_complexity Low_complexity 1 32 0 8 660 6594 0 3 4 chrUextra 9873011 9873779 -19130877 - SSU-rRNA_Dme rRNA rRNA -116 1879 1113 8 660 2433 3 10 0 chrUextra 9873879 9874168 -19130488 + Invader2_I LTR Gypsy 591 882 -3710 8 660 4153 8 0 0 chrUextra 9874168 9874647 -19130009 - GTWIN_LTR LTR Gypsy 0 495 17 8 660 6537 4 0 1 chrUextra 9874747 9875515 -19129141 - DOC LINE Jockey -1469 3256 2490 8 660 2442 3 0 3 chrUextra 9875615 9875903 -19128753 + QUASIMODO_LTR LTR Gypsy 372 658 0 8 660 3786 9 15 19 chrUextra 9875903 9876379 -19128277 + QUASIMODO_I LTR Gypsy 1 474 -5586 8 660 3554 10 0 0 chrUextra 9876483 9876896 -19127760 - Copia2_I LTR Copia -224 3938 3526 8 660 643 0 0 0 chrUextra 9877049 9877124 -19127532 - Copia2_LTR_DM LTR Copia -95 103 29 8 660 1063 16 0 0 chrUextra 9877124 9877251 -19127405 - Invader1_LTR LTR Gypsy 0 423 297 8 660 6624 0 0 0 chrUextra 9877351 9878119 -19126537 + DOC LINE Jockey 392 1159 -3566 8 660 335 102 17 0 chrUextra 9878219 9878278 -19126378 - ARS406_DM Unknown Unknown -221 132 73 8 660 2182 170 11 7 chrUextra 9878278 9878977 -19125679 + SAR_DM Satellite Satellite 1 702 -539 8 660 1396 25 20 20 chrUextra 9879105 9879308 -19125348 - NTS_DM Other Other 0 240 38 8 660 870 9 0 27 chrUextra 9879308 9879420 -19125236 - NTS_DM Other Other -107 133 25 8 660 1252 18 0 6 chrUextra 9879472 9879637 -19125019 - NTS_DM Other Other -39 201 38 8 660 818 18 0 35 chrUextra 9879637 9879750 -19124906 - NTS_DM Other Other -107 133 25 8 660 21 57 0 0 chrUextra 9879776 9879811 -19124845 + AT_rich Low_complexity Low_complexity 1 35 0 8 660 329 23 0 0 chrUextra 9879811 9879855 -19124801 - NTS_DM Other Other -39 201 158 8 660 2979 189 26 13 chrUextra 9879971 9880720 -19123936 + SAR_DM Satellite Satellite 1 758 -396 8 660 3843 4 0 0 chrUextra 9880823 9881283 -19123373 - DM412 LTR Gypsy -815 6082 5623 8 660 2675 9 0 3 chrUextra 9881271 9881591 -19123065 - DM412 LTR Gypsy -1845 5052 4734 8 660 1094 149 13 9 chrUextra 9881691 9881915 -19122741 + SAR_DM Satellite Satellite 376 600 -872 8 660 2057 35 3 31 chrUextra 9881915 9882209 -19122447 + BATUMI_I LTR Pao 7000 7285 -678 8 660 244 130 0 0 chrUextra 9882208 9882254 -19122402 - ARS406_DM Unknown Unknown -306 47 2 8 660 1233 163 8 0 chrUextra 9882214 9882459 -19122197 + SAR_DM Satellite Satellite 604 850 -622 8 660 2649 137 82 37 chrUextra 9882562 9883327 -19121329 + STALKER4_I LTR Gypsy 348 1195 -5335 8 660 6093 39 1 7 chrUextra 9883427 9884195 -19120461 - BATUMI_I LTR Pao -1806 6157 5394 8 660 6305 17 1 1 chrUextra 9884295 9885063 -19119593 - R1_DM LINE R1 -964 4392 3625 8 660 5215 31 5 3 chrUextra 9885165 9885820 -19118836 - R1_DM LINE R1 -294 5062 4407 8 660 699 33 0 0 chrUextra 9885840 9885931 -19118725 - R1_DM LINE R1 -1074 4282 4192 8 660 34 24 0 0 chrUextra 9886257 9886298 -19118358 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 21 95 0 0 chrUextra 9886511 9886574 -19118082 + AT_rich Low_complexity Low_complexity 1 63 0 8 660 1815 0 5 0 chrUextra 9886586 9886799 -19117857 + LSU-rRNA_Dme rRNA rRNA 1 214 -3686 8 660 2405 126 80 48 chrUextra 9886992 9887516 -19117140 + Gypsy12_LTR LTR Gypsy 1796 2336 0 8 660 5587 62 7 5 chrUextra 9887767 9888535 -19116121 - IDEFIX_I LTR Gypsy -2372 3256 2488 8 660 6612 0 1 3 chrUextra 9888637 9889403 -19115253 - SSU-rRNA_Dme rRNA rRNA -393 1602 838 8 660 1301 6 0 18 chrUextra 9889541 9889706 -19114950 + NTS_DM Other Other 1 162 -78 8 660 488 119 36 0 chrUextra 9889816 9889900 -19114756 + NTS_DM Other Other 4 90 -150 8 660 28 48 0 0 chrUextra 9890174 9890216 -19114440 + AT_rich Low_complexity Low_complexity 1 42 0 8 660 5596 64 1 0 chrUextra 9891239 9892007 -19112649 - STALKER4_I LTR Gypsy -868 5662 4894 8 660 1900 0 0 5 chrUextra 9892131 9892354 -19112302 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 660 21 95 0 0 chrUextra 9892366 9892429 -19112227 + AT_rich Low_complexity Low_complexity 1 63 0 8 660 34 24 0 0 chrUextra 9892642 9892683 -19111973 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 228 78 78 0 chrUextra 9893017 9893068 -19111588 + (TA)n Simple_repeat Simple_repeat 2 56 0 8 660 25 31 0 0 chrUextra 9893697 9893729 -19110927 + AT_rich Low_complexity Low_complexity 1 32 0 8 660 3471 61 2 6 chrUextra 9893845 9894324 -19110332 + BATUMI_I LTR Pao 7487 7963 0 8 660 1574 48 4 45 chrUextra 9894331 9894573 -19110083 + BATUMI_LTR LTR Pao 41 272 0 8 660 314 0 0 0 chrUextra 9894573 9894610 -19110046 - Invader2_LTR LTR Gypsy -211 55 19 8 660 3026 179 18 26 chrUextra 9894714 9895477 -19109179 - SAR_DM Satellite Satellite -291 1181 425 8 660 1150 92 7 3 chrUextra 9895618 9895903 -19108753 + (CAATA)n Simple_repeat Simple_repeat 1 286 0 8 660 6418 12 0 0 chrUextra 9896447 9897215 -19107441 + STALKER4_I LTR Gypsy 1483 2250 -4280 8 660 4013 101 71 0 chrUextra 9897315 9897967 -19106689 - Invader1_I LTR Gypsy -591 2595 1898 8 660 751 52 233 0 chrUextra 9897967 9898083 -19106573 + PROTOP_B DNA P 1 143 -1010 8 660 3220 3 5 0 chrUextra 9898183 9898558 -19106098 + ROO_LTR LTR Pao 52 428 0 8 660 3365 0 2 0 chrUextra 9898558 9898951 -19105705 + ROO_I LTR Pao 1 394 -7862 8 660 990 41 0 0 chrUextra 9899051 9899174 -19105482 - DMRT1B LINE R1 -5060 123 1 8 660 4163 2 2 0 chrUextra 9899334 9899815 -19104841 - DM412B_LTR LTR Gypsy -89 482 1 8 660 6161 1 26 1 chrUextra 9899919 9900687 -19103969 - ROO_I LTR Pao -7194 1062 276 8 660 360 0 0 0 chrUextra 9900929 9900969 -19103687 + (TAA)n Simple_repeat Simple_repeat 3 42 0 8 660 417 95 0 0 chrUextra 9901124 9901187 -19103469 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 660 4466 4 2 0 chrUextra 9902523 9903047 -19101609 - R1_DM LINE R1 -1561 3795 3271 8 660 2181 0 0 0 chrUextra 9903044 9903291 -19101365 - LSU-rRNA_Dme rRNA rRNA -1250 2650 2404 8 660 21 89 0 0 chrUextra 9903398 9903454 -19101202 + AT_rich Low_complexity Low_complexity 1 56 0 8 660 5949 1 3 0 chrUextra 9903473 9904159 -19100497 - SSU-rRNA_Dme rRNA rRNA 0 1995 1308 8 660 5000 17 61 0 chrUextra 9904386 9905027 -19099629 + PROTOP_A DNA P 1 680 -425 8 660 21 57 0 0 chrUextra 9905698 9905733 -19098923 + AT_rich Low_complexity Low_complexity 1 35 0 8 660 6562 3 0 0 chrUextra 9905995 9906763 -19097893 - FW_DM LINE Jockey -3721 971 204 8 660 5568 44 25 14 chrUextra 9906863 9907631 -19097025 - R1_DM LINE R1 -4187 1169 394 8 660 22 35 0 0 chrUextra 9907807 9907836 -19096820 + AT_rich Low_complexity Low_complexity 1 29 0 8 660 37 39 0 0 chrUextra 9907918 9907969 -19096687 + AT_rich Low_complexity Low_complexity 1 51 0 8 660 28 48 0 0 chrUextra 9908324 9908366 -19096290 + AT_rich Low_complexity Low_complexity 1 42 0 8 660 6619 3 1 0 chrUextra 9908599 9909367 -19095289 + FW_DM LINE Jockey 3721 4489 -203 8 660 6050 39 1 0 chrUextra 9910335 9911103 -19093553 - IDEFIX_I LTR Gypsy -3712 1916 1148 8 660 2739 194 18 29 chrUextra 9911205 9911970 -19092686 - SAR_DM Satellite Satellite -291 1181 425 8 660 1692 5 0 0 chrUextra 9912071 9912275 -19092381 - NTS_DM Other Other -36 204 1 8 660 1734 21 17 17 chrUextra 9912275 9912515 -19092141 - NTS_DM Other Other 0 240 1 8 660 1756 17 17 17 chrUextra 9912515 9912755 -19091901 - NTS_DM Other Other 0 240 1 8 660 536 12 48 36 chrUextra 9912755 9912838 -19091818 - NTS_DM Other Other 0 240 157 8 660 3462 107 75 68 chrUextra 9912981 9913703 -19090953 - HETA LINE telomeric -4944 1137 411 8 660 5076 7 0 0 chrUextra 9913807 9914406 -19090250 + G2_DM LINE Jockey 2501 3099 -3 8 660 772 0 0 0 chrUextra 9914487 9914575 -19090081 + SSU-rRNA_Dme rRNA rRNA 1 88 -1907 8 660 2520 16 128 0 chrUextra 9914675 9915104 -19089552 + R1_DM LINE R1 4873 5356 0 8 660 2177 63 7 0 chrUextra 9915137 9915436 -19089220 + R1_DM LINE R1 1 301 -5055 8 660 3512 14 0 0 chrUextra 9915543 9915961 -19088695 + R1_DM LINE R1 3242 3659 -1697 8 660 2786 34 3 0 chrUextra 9915959 9916311 -19088345 + R1_DM LINE R1 4833 5185 -171 8 660 5621 1 0 1 chrUextra 9916411 9917066 -19087590 + Copia_I LTR Copia 3940 4593 0 8 660 938 0 0 0 chrUextra 9917066 9917179 -19087477 + Copia_LTR LTR Copia 1 113 -163 8 660 3986 73 5 9 chrUextra 9917279 9917848 -19086808 - R1_DM LINE R1 -4767 589 23 8 660 1488 22 0 0 chrUextra 9917869 9918047 -19086609 - R1_DM LINE R1 0 5356 5179 8 660 6543 0 1 0 chrUextra 9918147 9918915 -19085741 + LSU-rRNA_Dme rRNA rRNA 411 1179 -2721 8 660 991 16 16 0 chrUextra 9919015 9919141 -19085515 + ROO_LTR LTR Pao 301 428 0 8 660 5341 0 26 0 chrUextra 9919141 9919783 -19084873 + ROO_I LTR Pao 1 659 -7597 8 660 2545 188 5 3 chrUextra 9919883 9920651 -19084005 + SAR_DM Satellite Satellite 1 769 -545 8 660 26 0 0 0 chrUextra 9920768 9920794 -19083862 + AT_rich Low_complexity Low_complexity 1 26 0 8 660 2368 154 59 110 chrUextra 9920818 9921518 -19083138 - HOBO DNA hAT 0 3016 2353 8 660 6493 14 0 0 chrUextra 9921618 9922385 -19082271 - DMRT1B LINE R1 -2565 2618 1852 8 660 4491 69 53 22 chrUextra 9922485 9923252 -19081404 + STALKER4_I LTR Gypsy 800 1590 -4940 8 660 1112 28 7 0 chrUextra 9923352 9923496 -19081160 - QUASIMODO_I LTR Gypsy -4095 1965 1821 8 660 4022 69 3 13 chrUextra 9923505 9924118 -19080538 - QUASIMODO_I LTR Gypsy -4450 1610 1004 8 660 2423 126 10 5 chrUextra 9924221 9924882 -19079774 + Gypsy3_I LTR Gypsy 5648 6177 0 8 660 492 25 0 221 chrUextra 9924882 9924986 -19079670 + Gypsy3_LTR LTR Gypsy 1 81 -317 8 660 6540 1 1 0 chrUextra 9925086 9925853 -19078803 + FW_DM LINE Jockey 2660 3427 -1265 8 660 6413 13 1 0 chrUextra 9925953 9926720 -19077936 - Copia2_I LTR Copia -2392 1770 1003 8 660 4482 96 22 1 chrUextra 9926900 9927587 -19077069 + DMRT1C LINE R1 2635 3335 -2108 8 660 23 68 0 0 chrUextra 9928044 9928088 -19076568 + AT_rich Low_complexity Low_complexity 1 44 0 8 660 27 81 0 0 chrUextra 9928134 9928196 -19076460 + AT_rich Low_complexity Low_complexity 1 62 0 8 660 245 125 46 15 chrUextra 9928873 9928938 -19075718 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 660 22 35 0 0 chrUextra 9929132 9929161 -19075495 + AT_rich Low_complexity Low_complexity 1 29 0 8 660 783 107 53 0 chrUextra 9930019 9930188 -19074468 + CT-rich Low_complexity Low_complexity 2 179 0 8 660 268 291 131 13 chrUextra 9930439 9930592 -19074064 + MICROPIA_I LTR Gypsy 3668 3838 -638 8 660 460 176 392 0 chrUextra 9930732 9930941 -19073715 - PROTOP DNA P -232 4248 3959 8 660 228 122 24 0 chrUextra 9930940 9930981 -19073675 - PROTOP DNA P -3565 915 874 8 660 2694 196 68 10 chrUextra 9931155 9931917 -19072739 - SAR_DM Satellite Satellite -589 806 1 8 660 2684 117 115 0 chrUextra 9932023 9932618 -19072038 + TART_B1 LINE telomeric 983 1632 -9022 8 660 1436 23 0 0 chrUextra 9932618 9932789 -19071867 - PROTOP DNA P 0 4480 4310 8 660 2402 183 21 10 chrUextra 9932910 9933485 -19071171 - SAR_DM Satellite Satellite -396 1076 496 8 660 650 63 53 0 chrUextra 9933490 9933585 -19071071 + ARS406_DM Unknown Unknown 90 189 -164 8 660 727 149 39 13 chrUextra 9933500 9933656 -19071000 - SAR_DM Satellite Satellite -569 903 744 8 660 1925 0 0 0 chrUextra 9933756 9933987 -19070669 + Copia_LTR LTR Copia 46 276 0 8 660 21 0 0 0 chrUextra 9934011 9934032 -19070624 + AT_rich Low_complexity Low_complexity 1 21 0 8 660 185 0 40 0 chrUextra 9934354 9934379 -19070277 + (CATAT)n Simple_repeat Simple_repeat 5 30 0 8 660 445 66 16 0 chrUextra 9934427 9934488 -19070168 + ROVER-LTR_DM LTR Gypsy 185 246 -121 8 660 237 164 0 32 chrUextra 9934623 9934686 -19069970 + XDMR_DM Unknown Unknown 300 360 0 8 660 2469 189 5 7 chrUextra 9934651 9935233 -19069423 - SAR_DM Satellite Satellite -396 1076 496 8 660 766 50 0 0 chrUextra 9935238 9935338 -19069318 + ARS406_DM Unknown Unknown 90 189 -164 8 660 763 136 0 14 chrUextra 9935248 9935390 -19069266 - SAR_DM Satellite Satellite -569 903 764 8 660 3089 11 3 0 chrUextra 9935490 9935857 -19068799 + DM412B_LTR LTR Gypsy 204 571 0 8 660 1174 14 0 7 chrUextra 9935857 9935990 -19068666 + DM412B_LTR LTR Gypsy 311 442 -6455 8 660 1517 16 5 5 chrUextra 9935980 9936174 -19068482 + DM412B_LTR LTR Gypsy 687 880 -6017 8 660 564 49 0 12 chrUextra 9936175 9936257 -19068399 + DM412 LTR Gypsy 820 900 -5997 8 660 306 0 0 0 chrUextra 9937090 9937124 -19067532 + (GAGAA)n Simple_repeat Simple_repeat 4 37 0 8 660 3333 22 17 9 chrUextra 9937224 9937643 -19067013 - Transib5 DNA Transib -1618 1383 962 8 660 2551 51 9 0 chrUextra 9937642 9937974 -19066682 + DMRT1A LINE R1 4837 5171 -12 8 660 775 278 53 35 chrUextra 9938091 9938598 -19066058 + QUASIMODO_I LTR Gypsy 1170 1729 -4331 8 660 612 124 0 0 chrUextra 9938958 9939063 -19065593 - ARS406_DM Unknown Unknown -248 105 1 8 660 3098 189 9 7 chrUextra 9938970 9939711 -19064945 + SAR_DM Satellite Satellite 195 937 -535 8 660 853 81 7 0 chrUextra 9939589 9939725 -19064931 - ARS406_DM Unknown Unknown -164 189 53 8 660 1628 39 5 0 chrUextra 9940386 9940592 -19064064 - DIVER2_LTR LTR Pao 0 385 179 8 660 6097 3 0 33 chrUextra 9940692 9941459 -19063197 + LSU-rRNA_Dme rRNA rRNA 143 884 -3016 8 660 1346 217 58 44 chrUextra 9941561 9942322 -19062334 - SAR_DM Satellite Satellite -224 1248 496 8 660 1433 0 0 0 chrUextra 9942426 9942594 -19062062 - Copia_LTR LTR Copia -108 168 1 8 660 1238 35 4 127 chrUextra 9943295 9943520 -19061136 - BATUMI_I LTR Pao -765 7198 7002 8 660 2357 0 0 7 chrUextra 9943520 9943802 -19060854 - BATUMI_I LTR Pao 0 7963 7684 8 660 1871 28 12 12 chrUextra 9943806 9944060 -19060596 + BATUMI_I LTR Pao 6497 6750 -1213 8 660 1147 53 0 0 chrUextra 9944160 9944311 -19060345 + DM1731_LTR LTR Copia 186 336 0 8 660 5277 7 2 0 chrUextra 9944311 9944927 -19059729 + DM1731_I LTR Copia 1 617 -3359 8 660 47 0 0 0 chrUextra 9945089 9945136 -19059520 + AT_rich Low_complexity Low_complexity 1 47 0 8 660 1777 14 0 0 chrUextra 9945152 9945364 -19059292 - STALKER4_LTR LTR Gypsy -190 212 1 8 660 3159 12 53 0 chrUextra 9945364 9945794 -19058862 - STALKER4_I LTR Gypsy 0 6530 6078 8 660 6392 18 1 0 chrUextra 9945894 9946661 -19057995 - R1_DM LINE R1 -2981 2375 1608 8 660 3152 183 17 26 chrUextra 9946763 9947505 -19057151 + SAR_DM Satellite Satellite 1 735 -227 8 660 2505 185 52 16 chrUextra 9947629 9948395 -19056261 + SAR_DM Satellite Satellite 1 793 -208 8 660 3208 172 14 24 chrUextra 9948497 9949254 -19055402 - SAR_DM Satellite Satellite -354 1118 369 8 660 6654 1 4 0 chrUextra 9949362 9950129 -19054527 - LSU-rRNA_Dme rRNA rRNA -240 3660 2891 8 660 4690 11 0 0 chrUextra 9950229 9950779 -19053877 + R1_DM LINE R1 4364 4913 -443 8 660 1936 0 0 0 chrUextra 9950777 9950996 -19053660 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2437 8 660 2384 95 7 46 chrUextra 9951096 9951863 -19052793 - DMSAT6 Satellite Satellite -108 736 1 8 660 403 88 179 8 chrUextra 9952104 9952232 -19052424 - TART LINE telomeric -3998 10479 10370 8 660 640 193 39 48 chrUextra 9952311 9952518 -19052138 + Gypsy3_LTR LTR Gypsy 31 235 -163 8 660 1297 12 0 0 chrUextra 9952830 9952992 -19051664 + TART LINE telomeric 7876 8037 -6440 8 660 3840 57 150 16 chrUextra 9952992 9953597 -19051059 + TART LINE telomeric 6797 7482 -6995 8 660 4304 145 13 3 chrUextra 9953697 9954460 -19050196 - HETA LINE telomeric -3941 2140 1370 8 660 6555 1 3 0 chrUextra 9954564 9955331 -19049325 + DOC LINE Jockey 2836 3604 -1121 8 660 5421 50 73 11 chrUextra 9955433 9956198 -19048458 + R1_DM LINE R1 148 960 -4396 8 660 6677 0 0 0 chrUextra 9956298 9957065 -19047591 + FW_DM LINE Jockey 1945 2711 -1981 8 660 1142 0 7 0 chrUextra 9957165 9957303 -19047353 + R1_DM LINE R1 4928 5066 -290 8 660 904 53 0 0 chrUextra 9957300 9957414 -19047242 + R1_DM LINE R1 5243 5356 0 8 660 3431 69 8 6 chrUextra 9957449 9957932 -19046724 + R1_DM LINE R1 3 486 -4870 8 660 6224 24 10 0 chrUextra 9958032 9958799 -19045857 - R1_DM LINE R1 -1723 3633 2859 8 660 6279 25 1 0 chrUextra 9958899 9959666 -19044990 - HETA LINE telomeric -3164 2917 2150 8 660 5381 55 29 3 chrUextra 9959766 9960533 -19044123 - DM297_I LTR Gypsy -1830 4337 3551 8 660 5063 44 72 35 chrUextra 9960633 9961393 -19043263 + TRANSIB2 DNA Transib 1433 2220 -624 8 661 3846 0 0 0 chrUextra 9961500 9961939 -19042717 + LSU-rRNA_Dme rRNA rRNA 722 1160 -2740 8 661 2823 9 0 0 chrUextra 9961939 9962267 -19042389 + TRANSPAC_LTR LTR Gypsy 1 328 -2 8 661 21 89 0 0 chrUextra 9962646 9962702 -19041954 + AT_rich Low_complexity Low_complexity 1 56 0 8 661 3595 2 2 0 chrUextra 9962721 9963134 -19041522 - SSU-rRNA_Dme rRNA rRNA 0 1995 1582 8 661 1231 173 18 0 chrUextra 9963251 9963476 -19041180 - DMRT1B LINE R1 -987 4196 3968 8 661 3773 49 0 8 chrUextra 9963479 9963997 -19040659 + TRANSIB2 DNA Transib 10 523 -2321 8 661 693 103 241 0 chrUextra 9964390 9964535 -19040121 + FB4_DM DNA Tc1 3 182 -3907 8 661 250 33 0 0 chrUextra 9964543 9964573 -19040083 - Baggins1 LINE LOA -697 4756 4727 8 661 27 29 0 0 chrUextra 9964812 9964846 -19039810 + AT_rich Low_complexity Low_complexity 1 34 0 8 661 2270 4 0 0 chrUextra 9964968 9965237 -19039419 - ACCORD_LTR LTR Gypsy -289 269 1 8 661 3024 44 24 93 chrUextra 9965237 9965734 -19038922 - NINJA_I LTR Pao -5342 669 207 8 661 2333 82 0 24 chrUextra 9965835 9966172 -19038484 - Gypsy12_I LTR Gypsy -561 4985 4657 8 661 1080 21 107 0 chrUextra 9966170 9966310 -19038346 - PROTOP_B DNA P -998 155 1 8 661 3419 162 16 21 chrUextra 9966703 9967466 -19037190 + SAR_DM Satellite Satellite 332 1090 -382 8 661 6557 13 0 0 chrUextra 9967569 9968332 -19036324 + R2_DM LINE R2 1909 2671 -936 8 661 3066 185 21 9 chrUextra 9968440 9969203 -19035453 + SAR_DM Satellite Satellite 246 1017 -455 8 661 2744 15 0 0 chrUextra 9969303 9969627 -19035029 - PROTOP_A DNA P -781 324 1 8 661 6362 7 0 0 chrUextra 9970170 9970935 -19033721 + STALKER4_I LTR Gypsy 3093 3857 -2673 8 661 23 0 0 0 chrUextra 9971558 9971581 -19033075 + AT_rich Low_complexity Low_complexity 1 23 0 8 661 6617 1 0 0 chrUextra 9971904 9972671 -19031985 + FW_DM LINE Jockey 2079 2845 -1847 8 661 1114 134 64 5 chrUextra 9973276 9973478 -19031178 - DNAREP1_DM LINE Penelope -358 236 23 8 661 3185 170 26 22 chrUextra 9973640 9974404 -19030252 - SAR_DM Satellite Satellite -354 1118 352 8 661 599 43 0 132 chrUextra 9974505 9974611 -19030045 + Baggins1 LINE LOA 5362 5453 0 8 661 1506 74 5 0 chrUextra 9975056 9975272 -19029384 + Baggins1 LINE LOA 4791 5007 -446 8 661 6386 21 0 0 chrUextra 9975372 9976139 -19028517 + ACCORD2_I LTR Gypsy 4430 5196 -2016 8 661 2999 187 36 9 chrUextra 9976241 9977001 -19027655 - SAR_DM Satellite Satellite -1061 780 1 8 661 3293 176 12 9 chrUextra 9977107 9977873 -19026783 + SAR_DM Satellite Satellite 287 1054 -418 8 661 4588 21 2 2 chrUextra 9978180 9978740 -19025916 + PROTOP DNA P 1 560 -3920 8 661 3323 176 10 10 chrUextra 9978840 9979607 -19025049 + SAR_DM Satellite Satellite 256 1022 -450 8 661 5504 0 3 0 chrUextra 9979707 9980346 -19024310 + IVK_DM LINE I 4762 5402 0 8 661 1131 8 0 0 chrUextra 9980346 9980474 -19024182 + (TTA)n Simple_repeat Simple_repeat 1 128 0 8 661 749 0 35 26 chrUextra 9980574 9980687 -19023969 + NTS_DM Other Other 126 239 -1 8 661 1825 8 17 13 chrUextra 9980688 9980927 -19023729 + NTS_DM Other Other 1 240 0 8 661 1693 30 17 17 chrUextra 9980927 9981167 -19023489 + NTS_DM Other Other 1 240 0 8 661 1319 6 0 17 chrUextra 9981167 9981341 -19023315 + NTS_DM Other Other 1 171 -69 8 661 726 117 0 0 chrUextra 9981441 9981552 -19023104 + (TA)n Simple_repeat Simple_repeat 2 112 0 8 661 4212 12 0 2 chrUextra 9981555 9982062 -19022594 + DM176_LTR LTR Gypsy 2 507 0 8 661 1081 15 0 0 chrUextra 9982073 9982208 -19022448 + DM176_LTR LTR Gypsy 1 135 -372 8 661 1714 0 0 0 chrUextra 9982308 9982506 -19022150 - LSU-rRNA_Dme rRNA rRNA -3702 198 1 8 661 21 95 0 0 chrUextra 9982518 9982581 -19022075 + AT_rich Low_complexity Low_complexity 1 63 0 8 661 34 24 0 0 chrUextra 9982794 9982835 -19021821 + AT_rich Low_complexity Low_complexity 1 41 0 8 661 2650 55 0 3 chrUextra 9983595 9983942 -19020714 + DIVER2_I LTR Pao 901 1246 -2901 8 661 6108 36 16 0 chrUextra 9984042 9984809 -19019847 - R1_DM LINE R1 -3342 2014 1236 8 661 2954 178 20 24 chrUextra 9984909 9985657 -19018999 + SAR_DM Satellite Satellite 415 1159 -313 8 661 276 338 0 0 chrUextra 9985831 9985982 -19018674 + GA-rich Low_complexity Low_complexity 4 154 0 8 661 296 329 0 0 chrUextra 9985994 9986070 -19018586 + polypurine Low_complexity Low_complexity 4 79 0 8 661 629 181 3 33 chrUextra 9986070 9986443 -19018213 + GA-rich Low_complexity Low_complexity 1 361 0 8 661 5687 45 0 4 chrUextra 9986643 9987410 -19017246 + IDEFIX_I LTR Gypsy 3206 3969 -1659 8 661 757 21 0 0 chrUextra 9987510 9987604 -19017052 + QUASIMODO_I LTR Gypsy 4234 4327 -1733 8 661 5781 1 0 0 chrUextra 9987603 9988277 -19016379 + QUASIMODO_I LTR Gypsy 426 1099 -4961 8 661 721 125 8 0 chrUextra 9988377 9988505 -19016151 - ARS406_DM Unknown Unknown -224 129 1 8 661 3087 186 14 9 chrUextra 9988409 9989144 -19015512 + SAR_DM Satellite Satellite 192 929 -543 8 661 3368 176 8 9 chrUextra 9989244 9990010 -19014646 - SAR_DM Satellite Satellite -484 988 224 8 661 6079 8 37 0 chrUextra 9990111 9990877 -19013779 + DM176_I LTR Gypsy 1269 2062 -4358 8 661 831 250 86 25 chrUextra 9990977 9991338 -19013318 + TAHRE LINE telomeric 9707 10089 -374 8 661 551 140 18 0 chrUextra 9991338 9991452 -19013204 + HETA LINE telomeric 5795 5910 -171 8 661 28 0 0 0 chrUextra 9991475 9991503 -19013153 + AT_rich Low_complexity Low_complexity 1 28 0 8 661 24 0 0 0 chrUextra 9992536 9992560 -19012096 + AT_rich Low_complexity Low_complexity 1 24 0 8 661 6562 1 0 0 chrUextra 9992709 9993475 -19011181 + ROO_I LTR Pao 1348 2113 -6143 8 661 6153 22 4 5 chrUextra 9993575 9994341 -19010315 - FW_DM LINE Jockey -662 4030 3266 8 661 6596 9 0 0 chrUextra 9994441 9995207 -19009449 - Gypsy6_I LTR Gypsy -2986 4026 3261 8 661 2876 185 47 22 chrUextra 9995307 9996069 -19008587 - TART LINE telomeric -4753 9724 8944 8 661 33 112 0 0 chrUextra 9996781 9996933 -19007723 + AT_rich Low_complexity Low_complexity 1 152 0 8 661 5461 63 18 3 chrUextra 9997039 9997804 -19006852 + QUASIMODO_I LTR Gypsy 125 901 -5159 8 661 1300 58 5 50 chrUextra 9997980 9998180 -19006476 + ROVER-LTR_DM LTR Gypsy 177 367 0 8 661 2939 0 2 149 chrUextra 9998180 9998669 -19005987 + ROVER-I_DM LTR Gypsy 1 417 -6167 8 661 6481 0 4 0 chrUextra 9998773 9999537 -19005119 + DOC LINE Jockey 1060 1826 -2899 8 661 207 0 0 0 chrUextra 9999890 9999913 -19004743 + (T)n Simple_repeat Simple_repeat 1 23 0 8 661 605 0 0 46 chrUextra 9999913 10000000 -19004656 - LINEJ1_DM LINE Jockey 0 5020 4938 8 661 2282 0 0 4 chrUextra 10000000 10000270 -19004386 - LINEJ1_DM LINE Jockey -83 4937 4669 8 661 519 16 0 0 chrUextra 10000503 10000565 -19004091 + CIRCE LINE Composite 4919 4980 -1376 8 661 3966 39 8 2 chrUextra 10000757 10001269 -19003387 - R1_DM LINE R1 -4037 1319 805 8 661 795 89 59 0 chrUextra 10002236 10002371 -19002285 + ARS406_DM Unknown Unknown 2 144 -209 8 661 3313 246 11 34 chrUextra 10002376 10003865 -19000791 - SAR_DM Satellite Satellite -514 1455 1 8 661 6342 3 0 18 chrUextra 10003967 10004733 -18999923 - QUASIMODO_I LTR Gypsy -5016 1044 293 8 661 3039 3 0 3 chrUextra 10006565 10006920 -18997736 - LSU-rRNA_Dme rRNA rRNA -907 2993 2640 8 661 3585 2 0 0 chrUextra 10006918 10007331 -18997325 - R1_DM LINE R1 0 5356 4944 8 661 6431 13 1 0 chrUextra 10007431 10008197 -18996459 - Gypsy6_I LTR Gypsy -4813 2199 1433 8 661 2042 162 19 8 chrUextra 10008301 10009063 -18995593 + SAR_DM Satellite Satellite 1 770 -476 8 661 1314 85 0 0 chrUextra 10009607 10009926 -18994730 + (CTTAT)n Simple_repeat Simple_repeat 1 319 0 8 661 5992 26 29 0 chrUextra 10010029 10010795 -18993861 - MDG1_I LTR Gypsy -3581 3015 2228 8 661 6497 3 3 1 chrUextra 10010895 10011661 -18992995 + LSU-rRNA_Dme rRNA rRNA 574 1340 -2560 8 661 600 203 21 14 chrUextra 10011763 10011903 -18992753 + HETRP_DM Satellite Satellite 1529 1669 -203 8 661 3666 2 2 0 chrUextra 10011920 10012342 -18992314 - Invader1_LTR LTR Gypsy 0 423 1 8 661 1446 5 11 5 chrUextra 10012342 10012527 -18992129 - Invader1_I LTR Gypsy 0 3186 3001 8 661 1114 13 0 0 chrUextra 10012627 10012778 -18991878 + FW_DM LINE Jockey 4542 4692 0 8 661 801 68 0 0 chrUextra 10012780 10012897 -18991759 + ARS406_DM Unknown Unknown 42 158 -195 8 661 2274 156 29 14 chrUextra 10012904 10013393 -18991263 - SAR_DM Satellite Satellite -569 903 408 8 661 3238 174 16 21 chrUextra 10014360 10015124 -18989532 - SAR_DM Satellite Satellite -361 1111 352 8 661 2823 193 35 31 chrUextra 10015225 10015989 -18988667 + SAR_DM Satellite Satellite 415 1181 -291 8 661 6456 7 3 7 chrUextra 10016091 10016857 -18987799 + CIRCE LINE Composite 1830 2592 -3764 8 661 2321 21 0 0 chrUextra 10016957 10017241 -18987415 - DMRT1A LINE R1 -2455 2728 2445 8 661 1569 80 0 49 chrUextra 10017254 10017518 -18987138 - Gypsy7_LTR LTR Gypsy 0 251 1 8 661 723 85 0 28 chrUextra 10017518 10017627 -18987029 - Gypsy7_I LTR Gypsy 0 4984 4879 8 661 4797 0 0 2 chrUextra 10017823 10018378 -18986278 - R1_DM LINE R1 -3 5353 4800 8 661 1792 0 0 0 chrUextra 10018385 10018589 -18986067 - R1_DM LINE R1 0 5356 5153 8 661 3429 2 0 7 chrUextra 10018689 10019107 -18985549 - DOC LINE Jockey -2670 2055 1641 8 661 2275 36 72 0 chrUextra 10019111 10019233 -18985423 - Stalker3_LTR LTR Gypsy -26 346 225 8 661 207 0 0 0 chrUextra 10019233 10019256 -18985400 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 661 2275 36 72 0 chrUextra 10019256 10019437 -18985219 - Stalker3_LTR LTR Gypsy -148 224 22 8 661 5778 29 90 0 chrUextra 10019555 10020321 -18984335 + R1_DM LINE R1 2598 3432 -1924 8 661 34 24 0 0 chrUextra 10021060 10021101 -18983555 + AT_rich Low_complexity Low_complexity 1 41 0 8 661 3656 201 0 3 chrUextra 10021288 10022053 -18982603 + ROVER-I_DM LTR Gypsy 3011 3773 -2811 8 661 6509 8 10 1 chrUextra 10022153 10022919 -18981737 + DM1731_I LTR Copia 970 1742 -2234 8 661 21 0 0 0 chrUextra 10023189 10023210 -18981446 + AT_rich Low_complexity Low_complexity 1 21 0 8 661 2506 79 9 42 chrUextra 10023886 10024651 -18980005 - DMSAT6 Satellite Satellite -43 739 1 8 661 35 24 0 0 chrUextra 10024930 10024972 -18979684 + AT_rich Low_complexity Low_complexity 1 42 0 8 661 352 0 42 0 chrUextra 10025191 10025239 -18979417 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 661 1510 6 0 6 chrUextra 10025336 10025517 -18979139 + SSU-rRNA_Dme rRNA rRNA 1 180 -1815 8 661 3214 184 32 13 chrUextra 10025617 10026374 -18978282 + SAR_DM Satellite Satellite 1 771 -208 8 661 6553 1 3 0 chrUextra 10027349 10028114 -18976542 + DOC LINE Jockey 1729 2495 -2230 8 661 2267 120 38 31 chrUextra 10028215 10028978 -18975678 + DMSAT6 Satellite Satellite 1 767 -69 8 661 995 0 0 0 chrUextra 10029082 10029197 -18975459 - NTS_DM Other Other -125 115 1 8 661 1847 4 17 13 chrUextra 10029197 10029436 -18975220 - NTS_DM Other Other 0 240 1 8 661 1861 0 17 13 chrUextra 10029436 10029675 -18974981 - NTS_DM Other Other 0 240 1 8 661 1183 12 23 17 chrUextra 10029675 10029847 -18974809 - NTS_DM Other Other 0 240 68 8 661 390 21 0 0 chrUextra 10029948 10029995 -18974661 + (TC)n Simple_repeat Simple_repeat 2 48 0 8 661 681 179 7 14 chrUextra 10030125 10030267 -18974389 - HETRP_DM Satellite Satellite -203 1669 1529 8 661 468 209 8 17 chrUextra 10030434 10030551 -18974105 - HETRP_DM Satellite Satellite -208 1664 1549 8 661 276 30 0 0 chrUextra 10030551 10030584 -18974072 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 661 6169 21 5 7 chrUextra 10030813 10031579 -18973077 - R1_DM LINE R1 -296 5060 4296 8 661 5365 58 60 11 chrUextra 10031681 10032445 -18972211 + R1_DM LINE R1 60 861 -4495 8 661 768 267 94 29 chrUextra 10032561 10033040 -18971616 + QUASIMODO_I LTR Gypsy 5551 6060 0 8 661 1573 50 4 31 chrUextra 10033411 10033638 -18971018 + BATUMI_LTR LTR Pao 52 272 0 8 661 807 11 0 0 chrUextra 10033638 10033730 -18970926 + (TTA)n Simple_repeat Simple_repeat 3 94 0 8 661 540 124 25 61 chrUextra 10033747 10033910 -18970746 - MDG1_I LTR Gypsy 0 6596 6440 8 661 1706 50 15 4 chrUextra 10033910 10034173 -18970483 - MDG1_I LTR Gypsy -299 6297 6032 8 661 2689 145 33 112 chrUextra 10034277 10035039 -18969617 + Gypsy12A_LTR LTR Gypsy 1510 2211 -69 8 661 4338 80 65 21 chrUextra 10035143 10035909 -18968747 + STALKER4_I LTR Gypsy 616 1415 -5115 8 661 6177 3 65 0 chrUextra 10036016 10036775 -18967881 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1825 8 661 2289 103 16 30 chrUextra 10037741 10038507 -18966149 + DMSAT6 Satellite Satellite 1 754 -37 8 661 6573 3 0 1 chrUextra 10038607 10039373 -18965283 - FW_DM LINE Jockey -807 3885 3121 8 661 428 119 24 0 chrUextra 10039483 10039567 -18965089 + SAR_DM Satellite Satellite 337 422 -1050 8 661 1324 154 37 0 chrUextra 10039579 10039851 -18964805 + SAR_DM Satellite Satellite 533 814 -658 8 661 565 129 13 28 chrUextra 10039887 10040062 -18964594 + FB4_DM DNA Tc1 2887 3070 -1019 8 661 708 188 34 0 chrUextra 10040060 10040236 -18964420 + SAR_DM Satellite Satellite 585 766 -706 8 661 2684 160 9 9 chrUextra 10040346 10041105 -18963551 + SAR_DM Satellite Satellite 1 759 -542 8 661 485 285 185 32 chrUextra 10041374 10041945 -18962711 + BLOOD_I LTR Gypsy 1822 2441 -4172 8 661 6610 5 0 0 chrUextra 10042071 10042837 -18961819 - ROO_I LTR Pao -497 7759 6994 8 661 4203 2 0 2 chrUextra 10042937 10043424 -18961232 - LSU-rRNA_Dme rRNA rRNA -775 3125 2640 8 661 2427 7 0 0 chrUextra 10043422 10043703 -18960953 - R1_DM LINE R1 0 5356 5076 8 661 2717 197 37 18 chrUextra 10043804 10044569 -18960087 + SAR_DM Satellite Satellite 452 1230 -242 8 661 4738 19 0 0 chrUextra 10044673 10045240 -18959416 - R1_DM LINE R1 -1664 3692 3126 8 661 1688 0 0 0 chrUextra 10045240 10045435 -18959221 - ACCORD_LTR LTR Gypsy 0 558 364 8 661 4202 14 2 0 chrUextra 10045556 10046062 -18958594 - DM176_LTR LTR Gypsy 0 507 1 8 661 1023 26 75 50 chrUextra 10046062 10046203 -18958453 + STALKER4_LTR LTR Gypsy 258 402 0 8 661 330 25 0 0 chrUextra 10046203 10046230 -18958426 + STALKER4_I LTR Gypsy 1 27 -6503 8 661 289 96 0 37 chrUextra 10046230 10046284 -18958372 + Stalker2_I LTR Gypsy 1 52 -7350 8 661 6592 8 0 0 chrUextra 10046401 10047167 -18957489 + DOC LINE Jockey 3050 3815 -910 8 661 616 106 10 0 chrUextra 10047267 10047371 -18957285 - ARS406_DM Unknown Unknown -248 105 1 8 661 3100 172 16 15 chrUextra 10047279 10048024 -18956632 + SAR_DM Satellite Satellite 195 940 -532 8 661 21 95 0 0 chrUextra 10048232 10048295 -18956361 + AT_rich Low_complexity Low_complexity 1 63 0 8 661 4594 2 0 46 chrUextra 10048307 10048899 -18955757 + LSU-rRNA_Dme rRNA rRNA 1 565 -3335 8 661 359 138 92 0 chrUextra 10049051 10049116 -18955540 - G3_DM LINE Jockey -4026 579 509 8 661 470 138 0 11 chrUextra 10049211 10049299 -18955357 - G3_DM LINE Jockey -4416 189 103 8 661 819 123 8 18 chrUextra 10049865 10050609 -18954047 + RSP Satellite Satellite 1 736 0 8 661 2128 231 2 2 chrUextra 10050731 10051239 -18953417 - ROVER-I_DM LTR Gypsy -4021 2563 2056 8 661 491 308 8 8 chrUextra 10051243 10051495 -18953161 - ROVER-I_DM LTR Gypsy -4949 1635 1384 8 661 6100 32 1 0 chrUextra 10051597 10052351 -18952305 - FW_DM LINE Jockey -3937 755 1 8 661 6510 12 0 0 chrUextra 10052464 10053229 -18951427 + FW_DM LINE Jockey 3419 4183 -509 8 661 6249 30 0 0 chrUextra 10053329 10054095 -18950561 - DIVER_I LTR Pao -1983 3660 2895 8 661 3121 28 5 5 chrUextra 10055061 10055450 -18949206 + R1_DM LINE R1 4968 5356 0 8 661 2532 58 6 6 chrUextra 10055483 10055827 -18948829 + R1_DM LINE R1 1 344 -5012 8 661 5325 2 19 9 chrUextra 10055927 10056560 -18948096 + HMSBEAGLE_I LTR Gypsy 158 796 -5733 8 661 697 31 54 15 chrUextra 10056560 10056690 -18947966 + (TTA)n Simple_repeat Simple_repeat 3 137 0 8 661 5516 11 1 2 chrUextra 10056793 10057559 -18947097 - R1_DM LINE R1 -3822 1534 739 8 661 2420 103 43 35 chrUextra 10057659 10058425 -18946231 + DMSAT6 Satellite Satellite 1 771 -110 8 661 5401 33 0 0 chrUextra 10058525 10059156 -18945500 - NINJA_I LTR Pao -3914 2097 1467 8 661 1211 38 12 25 chrUextra 10059129 10059291 -18945365 - NINJA_I LTR Pao -5204 807 648 8 661 1940 23 0 0 chrUextra 10059940 10060157 -18944499 - DIVER2_LTR LTR Pao 0 385 169 8 661 3448 191 9 8 chrUextra 10060257 10061023 -18943633 - SAR_DM Satellite Satellite -439 1033 267 8 661 5446 89 28 14 chrUextra 10061123 10061888 -18942768 - Gypsy12_I LTR Gypsy -3294 2252 1478 8 661 6996 4 0 0 chrUextra 10061989 10062755 -18941901 + DM176_I LTR Gypsy 2341 3106 -3314 8 661 3987 54 41 2 chrUextra 10062855 10063397 -18941259 - I_DM LINE I -5569 662 100 8 661 6198 9 76 0 chrUextra 10063721 10064487 -18940169 + DM176_I LTR Gypsy 1110 1933 -4487 8 661 2831 112 21 57 chrUextra 10064631 10065161 -18939495 - BATUMI_I LTR Pao -6646 1317 807 8 661 1579 87 0 0 chrUextra 10065145 10065353 -18939303 - DMRT1B LINE R1 -2562 2621 2414 8 661 6998 9 0 0 chrUextra 10065453 10066219 -18938437 + R1_DM LINE R1 3898 4663 -693 8 661 6608 29 1 0 chrUextra 10066319 10067085 -18937571 - R1_DM LINE R1 -2389 2967 2201 8 661 1981 236 132 12 chrUextra 10067198 10067780 -18936876 + Invader3_I LTR Gypsy 198 849 -4039 8 661 256 111 0 0 chrUextra 10067776 10067812 -18936844 + Invader3_I LTR Gypsy 1436 1471 -3417 8 661 693 78 47 37 chrUextra 10067813 10067920 -18936736 + PROTOP_B DNA P 1046 1153 0 8 661 913 143 137 15 chrUextra 10068051 10068254 -18936402 + TART_B1 LINE telomeric 3913 4185 -6469 8 661 2999 65 54 0 chrUextra 10068254 10068641 -18936015 + TART LINE telomeric 1452 1859 -12618 8 661 1548 32 16 0 chrUextra 10068632 10068817 -18935839 + TART LINE telomeric 2045 2232 -12245 8 661 34 24 0 0 chrUextra 10069221 10069262 -18935394 + AT_rich Low_complexity Low_complexity 1 41 0 8 661 21 95 0 0 chrUextra 10069475 10069538 -18935118 + AT_rich Low_complexity Low_complexity 1 63 0 8 661 1201 0 8 0 chrUextra 10069550 10069683 -18934973 + LSU-rRNA_Dme rRNA rRNA 1 134 -3766 8 661 5822 54 29 1 chrUextra 10070649 10071413 -18933243 + TART LINE telomeric 2182 2966 -11511 8 661 22 0 0 0 chrUextra 10072217 10072239 -18932417 + AT_rich Low_complexity Low_complexity 1 22 0 8 661 3372 182 11 14 chrUextra 10072379 10073144 -18931512 - SAR_DM Satellite Satellite -505 967 206 8 661 6540 33 20 0 chrUextra 10073244 10074009 -18930647 + MAX_I LTR Pao 3834 4613 -3301 8 661 6917 1 1 1 chrUextra 10074109 10074874 -18929782 + FW_DM LINE Jockey 1099 1863 -2829 8 661 3215 182 13 6 chrUextra 10074974 10075739 -18928917 - SAR_DM Satellite Satellite -667 769 1 8 661 3179 41 160 0 chrUextra 10075839 10076513 -18928143 + PROTOP DNA P 42 823 -3657 8 661 756 21 0 0 chrUextra 10076508 10076604 -18928052 + PROTOP DNA P 3802 3897 -583 8 661 1272 61 0 0 chrUextra 10076722 10077020 -18927636 + (ATAAG)n Simple_repeat Simple_repeat 1 298 0 8 661 4017 0 0 0 chrUextra 10077020 10077448 -18927208 - ROO_LTR LTR Pao 0 428 1 8 661 3064 0 0 0 chrUextra 10077569 10077897 -18926759 + LSU-rRNA_Dme rRNA rRNA 3573 3900 0 8 661 266 196 0 19 chrUextra 10077998 10078050 -18926606 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 266 196 0 19 chrUextra 10078090 10078142 -18926514 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 266 196 0 19 chrUextra 10078182 10078234 -18926422 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 277 176 0 19 chrUextra 10078265 10078317 -18926339 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 645 272 91 20 chrUextra 10078801 10079199 -18925457 - QUASIMODO_I LTR Gypsy 0 6060 5635 8 661 2567 94 30 33 chrUextra 10079300 10080064 -18924592 - DMSAT6 Satellite Satellite -28 762 1 8 661 3210 197 11 11 chrUextra 10080164 10080903 -18923753 - SAR_DM Satellite Satellite -554 918 180 8 661 888 98 0 0 chrUextra 10080797 10080929 -18923727 + ARS406_DM Unknown Unknown 1 132 -221 8 661 2759 90 18 16 chrUextra 10081031 10081791 -18922865 + DMSAT6 Satellite Satellite 1 761 -97 8 661 4215 123 43 12 chrUextra 10082775 10083524 -18921132 + TART LINE telomeric 8950 9721 -4756 8 661 6401 41 5 3 chrUextra 10083624 10084389 -18920267 - R1_DM LINE R1 -3491 1865 1099 8 661 3429 19 40 0 chrUextra 10084489 10085254 -18919402 + R1_DM LINE R1 2047 2842 -2514 8 661 6868 11 1 1 chrUextra 10085355 10086119 -18918537 + R1_DM LINE R1 3546 4309 -1047 8 661 6757 9 0 0 chrUextra 10086219 10086984 -18917672 + Invader2_I LTR Gypsy 2260 3024 -1568 8 661 1620 0 1 7 chrUextra 10087084 10087849 -18916807 + (TAGA)n Simple_repeat Simple_repeat 1 760 0 8 661 3536 170 9 20 chrUextra 10087949 10088698 -18915958 + SAR_DM Satellite Satellite 379 1119 -353 8 661 334 180 32 43 chrUextra 10088621 10088714 -18915942 - XDMR_DM Unknown Unknown -9 351 260 8 661 3424 138 229 13 chrUextra 10088814 10089579 -18915077 - TART LINE telomeric -3819 10658 9729 8 661 6852 14 3 0 chrUextra 10090544 10091307 -18913349 - DOC2_DM LINE Jockey -2199 2594 1830 8 661 6806 16 1 1 chrUextra 10091409 10092174 -18912482 - R1_DM LINE R1 -1464 3892 3128 8 82 1553 276 66 75 chrUextra 10092274 10092925 -18911731 - ROVER-I_DM LTR Gypsy -5266 1318 330 8 662 5001 30 19 2 chrUextra 10093139 10093904 -18910752 - ROO_I LTR Pao -4875 3381 2567 8 662 6879 11 14 0 chrUextra 10094004 10094765 -18909891 - Invader1_I LTR Gypsy -1368 1818 1047 8 662 1456 12 6 6 chrUextra 10094880 10095048 -18909608 - TLD3 Unknown Unknown -3 169 2 8 662 1847 272 18 15 chrUextra 10095026 10095634 -18909022 + ROVER-I_DM LTR Gypsy 2576 3185 -3399 8 662 5151 33 3 0 chrUextra 10095734 10096333 -18908323 - DOC3_DM LINE Jockey -1941 2799 2199 8 662 1324 48 12 0 chrUextra 10096332 10096499 -18908157 - DOC3_DM LINE Jockey -2845 1895 1727 8 662 240 155 32 65 chrUextra 10098167 10098229 -18906427 + Gypsy_LTR LTR Gypsy 1 60 -422 8 662 3619 183 9 7 chrUextra 10098329 10099093 -18905563 + SAR_DM Satellite Satellite 229 994 -478 8 662 6446 28 44 3 chrUextra 10099194 10099959 -18904697 - R1_DM LINE R1 -2115 3241 2445 8 662 3004 3 0 69 chrUextra 10100059 10100434 -18904222 - LSU-rRNA_Dme rRNA rRNA -3551 349 1 8 662 21 95 0 0 chrUextra 10100446 10100509 -18904147 + AT_rich Low_complexity Low_complexity 1 63 0 8 662 34 24 0 0 chrUextra 10100722 10100763 -18903893 + AT_rich Low_complexity Low_complexity 1 41 0 8 662 6652 30 0 0 chrUextra 10100924 10101689 -18902967 + R1_DM LINE R1 2498 3262 -2094 8 662 4865 28 51 11 chrUextra 10101798 10102407 -18902249 - DOC3_DM LINE Jockey -1103 3637 3005 8 662 1207 34 40 0 chrUextra 10102406 10102554 -18902102 - DOC3_DM LINE Jockey -1886 2854 2701 8 662 7043 1 0 1 chrUextra 10102654 10103419 -18901237 + FW_DM LINE Jockey 1831 2594 -2098 8 662 1027 45 41 6 chrUextra 10103519 10103705 -18900951 + BLOOD_I LTR Gypsy 6350 6613 0 8 662 2004 47 8 45 chrUextra 10103705 10103973 -18900683 + BLOOD_LTR LTR Gypsy 1 258 -141 8 662 1488 33 33 0 chrUextra 10104101 10104284 -18900372 + BLOOD_I LTR Gypsy 32 220 -6393 8 662 6492 44 3 0 chrUextra 10104384 10105149 -18899507 - DIVER_I LTR Pao -4729 914 148 8 662 251 139 0 0 chrUextra 10105274 10105317 -18899339 + G6_DM LINE Jockey 1 43 -1999 8 662 844 115 0 0 chrUextra 10106114 10106244 -18898412 - ARS406_DM Unknown Unknown -223 130 1 8 662 3311 182 23 14 chrUextra 10106138 10106879 -18897777 + SAR_DM Satellite Satellite 180 927 -545 8 662 532 119 36 0 chrUextra 10107104 10107188 -18897468 + NTS_DM Other Other 4 90 -150 8 662 28 48 0 0 chrUextra 10107461 10107503 -18897153 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 3702 171 9 18 chrUextra 10107846 10108609 -18896047 - SAR_DM Satellite Satellite -382 1090 335 8 662 248 174 0 128 chrUextra 10109134 10109338 -18895318 + (TTG)n Simple_repeat Simple_repeat 3 180 0 8 662 7035 11 1 0 chrUextra 10109574 10110339 -18894317 + BEL_I LTR Pao 2888 3653 -1751 8 662 2892 6 0 0 chrUextra 10110439 10110750 -18893906 + Gypsy4_I LTR Gypsy 5978 6288 0 8 662 2586 21 0 0 chrUextra 10110750 10111037 -18893619 + Gypsy4_LTR LTR Gypsy 1 287 0 8 662 278 59 0 0 chrUextra 10111305 10111339 -18893317 + ARS406_DM Unknown Unknown 156 189 -164 8 662 3094 193 16 24 chrUextra 10111315 10112069 -18892587 - SAR_DM Satellite Satellite -281 1191 444 8 662 6613 18 1 5 chrUextra 10112169 10112934 -18891722 - FW_DM LINE Jockey -565 4127 3366 8 662 3350 231 34 33 chrUextra 10113057 10115529 -18889127 - SAR_DM Satellite Satellite -396 2474 1 8 662 2120 20 0 0 chrUextra 10115629 10115875 -18888781 + DOC2_DM LINE Jockey 505 750 -4043 8 662 2861 12 0 0 chrUextra 10115875 10116196 -18888460 + MAX_LTR LTR Pao 1 321 0 8 662 1751 46 130 8 chrUextra 10116494 10116893 -18887763 + IDEFIX_I LTR Gypsy 2698 3145 -2483 8 662 2806 60 0 0 chrUextra 10116891 10117259 -18887397 + IDEFIX_I LTR Gypsy 3540 3907 -1721 8 662 996 151 25 106 chrUextra 10117378 10117615 -18887041 + DMLTR5 LTR Gypsy 49 266 0 8 662 200 167 69 0 chrUextra 10117646 10117718 -18886938 + (TA)n Simple_repeat Simple_repeat 1 77 0 8 662 22 35 0 0 chrUextra 10117720 10117749 -18886907 + AT_rich Low_complexity Low_complexity 1 29 0 8 662 285 216 0 0 chrUextra 10118225 10118276 -18886380 + Gypsy12A_LTR LTR Gypsy 414 464 -1816 8 662 773 273 36 79 chrUextra 10118385 10118803 -18885853 + Gypsy12_LTR LTR Gypsy 679 1078 -1258 8 662 852 179 35 6 chrUextra 10118815 10118989 -18885667 + Gypsy12_LTR LTR Gypsy 1158 1336 -1000 8 662 1705 58 16 0 chrUextra 10119101 10119358 -18885298 + QUASIMODO_I LTR Gypsy 5467 5727 -333 8 662 2148 122 43 33 chrUextra 10119452 10119854 -18884802 + QUASIMODO_LTR LTR Gypsy 63 602 -56 8 662 6024 25 30 18 chrUextra 10119954 10120719 -18883937 - MDG3_I LTR Gypsy -713 4273 3500 8 662 3664 5 0 0 chrUextra 10120819 10121223 -18883433 + R1_DM LINE R1 4953 5356 0 8 662 3273 3 0 0 chrUextra 10121221 10121584 -18883072 + LSU-rRNA_Dme rRNA rRNA 2640 3002 -898 8 662 6623 21 1 0 chrUextra 10122549 10123314 -18881342 - FW_DM LINE Jockey -644 4048 3283 8 662 6419 9 0 12 chrUextra 10123414 10124179 -18880477 - Gypsy4_I LTR Gypsy -5443 845 90 8 662 1097 183 72 0 chrUextra 10124279 10124514 -18880142 - Stalker2_I LTR Gypsy -6909 493 242 8 662 306 105 0 50 chrUextra 10124682 10124742 -18879914 - Stalker2_I LTR Gypsy -7345 57 1 8 662 345 25 0 0 chrUextra 10124742 10124769 -18879887 - STALKER4_I LTR Gypsy -6503 27 1 8 662 2451 7 0 4 chrUextra 10124769 10125044 -18879612 - STALKER4_LTR LTR Gypsy 0 402 129 8 662 6625 16 1 4 chrUextra 10125144 10125909 -18878747 + Gypsy4_I LTR Gypsy 984 1746 -4542 8 662 364 190 10 20 chrUextra 10126009 10126111 -18878545 + XDMR_DM Unknown Unknown 260 360 0 8 662 3396 177 8 17 chrUextra 10126025 10126774 -18877882 - SAR_DM Satellite Satellite -354 1118 377 8 662 3516 229 29 26 chrUextra 10126879 10128492 -18876164 - SAR_DM Satellite Satellite -577 1617 1 8 662 6652 11 9 1 chrUextra 10128604 10129369 -18875287 - Copia2_I LTR Copia -3161 1001 231 8 662 2074 126 139 0 chrUextra 10129481 10130118 -18874538 - HMSBEAGLE_I LTR Gypsy -741 5788 5063 8 662 654 117 0 0 chrUextra 10130130 10130224 -18874432 - HMSBEAGLE_I LTR Gypsy -1817 4712 4619 8 662 6908 0 1 3 chrUextra 10130334 10131099 -18873557 + SSU-rRNA_Dme rRNA rRNA 458 1221 -774 8 662 1622 348 8 8 chrUextra 10131199 10131963 -18872693 - GTWIN_I LTR Gypsy -2329 4092 3329 8 662 6673 4 0 1 chrUextra 10132064 10132828 -18871828 - ROO_I LTR Pao -3335 4921 4159 8 662 232 148 82 0 chrUextra 10132928 10132989 -18871667 - QUASIMODO_I LTR Gypsy -528 5532 5467 8 662 5083 45 59 13 chrUextra 10132979 10133692 -18870964 - QUASIMODO_I LTR Gypsy -886 5174 4429 8 662 2461 163 9 9 chrUextra 10133792 10134556 -18870100 + SAR_DM Satellite Satellite 1 763 -444 8 662 886 162 0 0 chrUextra 10134656 10134798 -18869858 - MDG1_I LTR Gypsy -2779 3817 3676 8 662 5221 8 0 2 chrUextra 10134822 10135420 -18869236 + DOC2_DM LINE Jockey 2676 3272 -1521 8 662 6241 19 1 7 chrUextra 10135520 10136151 -18868505 - ROO_I LTR Pao -2137 6119 5490 8 662 216 0 0 0 chrUextra 10136151 10136175 -18868481 + (CATAA)n Simple_repeat Simple_repeat 2 25 0 8 662 6241 19 1 7 chrUextra 10136175 10136284 -18868372 - ROO_I LTR Pao -2767 5489 5383 8 662 6869 9 0 0 chrUextra 10136384 10137148 -18867508 - MICROPIA_I LTR Gypsy -3265 1211 448 8 662 2146 111 13 48 chrUextra 10137248 10137625 -18867031 - Gypsy12_I LTR Gypsy -5156 390 27 8 662 1731 186 36 28 chrUextra 10137595 10137987 -18866669 - Gypsy12_LTR LTR Gypsy -1938 398 4 8 662 21 89 0 0 chrUextra 10138115 10138171 -18866485 + AT_rich Low_complexity Low_complexity 1 56 0 8 662 6199 4 1 0 chrUextra 10138190 10138876 -18865780 - SSU-rRNA_Dme rRNA rRNA 0 1995 1309 8 662 3222 169 25 43 chrUextra 10138976 10139739 -18864917 + SAR_DM Satellite Satellite 410 1158 -314 8 662 4026 26 43 2 chrUextra 10139840 10140604 -18864052 + R1_DM LINE R1 2152 2946 -2410 8 662 3390 183 11 11 chrUextra 10141571 10142332 -18862324 - SAR_DM Satellite Satellite -514 958 198 8 662 1376 35 0 9 chrUextra 10143301 10143619 -18861037 + (TTATA)n Simple_repeat Simple_repeat 1 314 0 8 662 383 120 0 26 chrUextra 10143619 10143644 -18861012 + (GGAGA)n Simple_repeat Simple_repeat 2 25 0 8 662 1400 39 0 6 chrUextra 10143644 10143824 -18860832 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 8 662 383 120 0 26 chrUextra 10143824 10143875 -18860781 + (GGAGA)n Simple_repeat Simple_repeat 1 51 0 8 662 1095 96 0 27 chrUextra 10143876 10144059 -18860597 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 8 662 439 315 79 30 chrUextra 10144474 10144859 -18859797 - Gypsy6_I LTR Gypsy -3888 3124 2788 8 662 3434 176 37 12 chrUextra 10145025 10145788 -18858868 - SAR_DM Satellite Satellite -435 1037 256 8 662 6870 1 3 3 chrUextra 10145888 10146652 -18858004 + SSU-rRNA_Dme rRNA rRNA 1010 1773 -222 8 662 281 154 19 19 chrUextra 10146753 10146806 -18857850 + HETRP_DM Satellite Satellite 1623 1675 -197 8 662 238 208 0 19 chrUextra 10146858 10146912 -18857744 + HETRP_DM Satellite Satellite 1580 1632 -240 8 662 328 174 250 42 chrUextra 10146959 10147055 -18857601 + HETRP_DM Satellite Satellite 1519 1634 -238 8 662 838 171 12 19 chrUextra 10147103 10147264 -18857392 + HETRP_DM Satellite Satellite 1516 1675 -197 8 662 238 208 0 19 chrUextra 10147316 10147370 -18857286 + HETRP_DM Satellite Satellite 1580 1632 -240 8 662 241 198 263 42 chrUextra 10147417 10147512 -18857144 + HETRP_DM Satellite Satellite 1519 1634 -238 8 662 6859 0 3 4 chrUextra 10147616 10148380 -18856276 - SSU-rRNA_Dme rRNA rRNA -116 1879 1117 8 662 1224 160 37 60 chrUextra 10148480 10148804 -18855852 - QUASIMODO_LTR LTR Gypsy -174 484 26 8 662 1760 34 0 0 chrUextra 10148847 10149084 -18855572 - QUASIMODO_I LTR Gypsy -333 5727 5491 8 662 995 82 34 0 chrUextra 10149093 10149240 -18855416 - QUASIMODO_I LTR Gypsy -885 5175 5024 8 662 4590 2 0 0 chrUextra 10149344 10149848 -18854808 - LSU-rRNA_Dme rRNA rRNA -757 3143 2640 8 662 2375 0 4 0 chrUextra 10149846 10150108 -18854548 - R1_DM LINE R1 0 5356 5094 8 662 1887 14 0 0 chrUextra 10150208 10150420 -18854236 - PROTOP_A DNA P -50 1055 844 8 662 4626 22 22 0 chrUextra 10150420 10150970 -18853686 + PROTOP_A DNA P 1 562 -543 8 662 1500 31 0 11 chrUextra 10151072 10151332 -18853324 + (TATAA)n Simple_repeat Simple_repeat 1 257 0 8 662 938 53 23 23 chrUextra 10151348 10151522 -18853134 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 8 662 1620 0 0 0 chrUextra 10151522 10151834 -18852822 + (GAGAA)n Simple_repeat Simple_repeat 1 312 0 8 662 6546 18 1 3 chrUextra 10151936 10152700 -18851956 - R1_DM LINE R1 -973 4383 3621 8 662 6507 5 3 0 chrUextra 10152800 10153564 -18851092 - Invader2_I LTR Gypsy -2524 2068 1303 8 662 2550 102 23 8 chrUextra 10153664 10154396 -18850260 - DMSAT6 Satellite Satellite -45 743 1 8 662 6602 17 21 0 chrUextra 10154528 10155292 -18849364 + Gypsy4_I LTR Gypsy 2206 2985 -3303 8 662 6924 1 0 3 chrUextra 10155392 10156156 -18848500 + SSU-rRNA_Dme rRNA rRNA 301 1062 -933 8 662 3754 106 107 32 chrUextra 10156257 10156909 -18847747 + Gypsy12_I LTR Gypsy 404 1104 -4442 8 662 885 183 350 64 chrUextra 10157120 10157810 -18846846 + TART LINE telomeric 9195 10491 -3986 8 662 34 24 0 0 chrUextra 10157821 10157862 -18846794 + AT_rich Low_complexity Low_complexity 1 41 0 8 662 735 98 0 0 chrUextra 10157984 10158096 -18846560 - ARS406_DM Unknown Unknown -240 113 2 8 662 3290 188 8 9 chrUextra 10158001 10158748 -18845908 + SAR_DM Satellite Satellite 192 937 -535 8 662 6541 26 0 0 chrUextra 10158848 10159612 -18845044 - MDG1_I LTR Gypsy -1840 4756 3993 8 662 6954 4 0 0 chrUextra 10159712 10160476 -18844180 - DM1731_I LTR Copia -484 3492 2729 8 662 524 126 0 11 chrUextra 10160858 10160946 -18843710 + G3_DM LINE Jockey 103 189 -4416 8 662 384 185 75 101 chrUextra 10160937 10161106 -18843550 + G3_DM LINE Jockey 364 579 -4026 8 662 6592 11 8 0 chrUextra 10161440 10162204 -18842452 - QUASIMODO_I LTR Gypsy -3005 3055 2286 8 662 28 48 0 0 chrUextra 10162704 10162746 -18841910 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 962 108 0 0 chrUextra 10163175 10163323 -18841333 - NTS_DM Other Other -86 154 7 8 662 282 179 18 0 chrUextra 10163403 10163459 -18841197 - NTS_DM Other Other -183 57 1 8 662 1059 159 29 21 chrUextra 10163459 10163697 -18840959 - NTS_DM Other Other 0 240 1 8 662 305 161 18 0 chrUextra 10163771 10163827 -18840829 - NTS_DM Other Other -183 57 1 8 662 302 153 68 48 chrUextra 10163827 10163930 -18840726 - NTS_DM Other Other 0 240 136 8 662 26 30 0 0 chrUextra 10164178 10164211 -18840445 + AT_rich Low_complexity Low_complexity 1 33 0 8 662 5076 51 62 8 chrUextra 10164896 10165625 -18839031 - PROTOP_B DNA P -162 991 224 8 662 234 26 308 0 chrUextra 10165621 10165660 -18838996 - PROTOP_B DNA P -1059 94 44 8 662 5524 99 7 0 chrUextra 10165765 10166524 -18838132 + Gypsy12_I LTR Gypsy 3485 4248 -1298 8 662 1884 40 0 0 chrUextra 10166624 10166850 -18837806 - FW_DM LINE Jockey -4466 226 1 8 662 4433 36 17 2 chrUextra 10166858 10167388 -18837268 + R1_DM LINE R1 1377 1914 -3442 8 662 1734 0 0 0 chrUextra 10167488 10167672 -18836984 + SSU-rRNA_Dme rRNA rRNA 1812 1995 0 8 662 21 89 0 0 chrUextra 10167691 10167747 -18836909 + AT_rich Low_complexity Low_complexity 1 56 0 8 662 2162 4 8 0 chrUextra 10168354 10168599 -18836057 - DOC LINE Jockey -4473 252 6 8 662 1433 52 156 0 chrUextra 10168612 10168823 -18835833 + PROTOP DNA P 2991 3234 -1246 8 662 1126 34 0 58 chrUextra 10169216 10169371 -18835285 - DM1731_I LTR Copia -84 3892 3747 8 662 5728 8 0 2 chrUextra 10169351 10169980 -18834676 - DM1731_I LTR Copia -364 3612 2985 8 662 2269 129 11 49 chrUextra 10170081 10170841 -18833815 - DMSAT6 Satellite Satellite -120 731 1 8 662 2030 5 0 0 chrUextra 10170944 10171164 -18833492 - DMRT1A LINE R1 -3684 1499 1280 8 662 4761 15 2 2 chrUextra 10171169 10171707 -18832949 + FW_DM LINE Jockey 3229 3766 -926 8 662 6891 4 1 0 chrUextra 10171808 10172571 -18832085 - Invader3_I LTR Gypsy -1849 3039 2276 8 662 6768 9 25 0 chrUextra 10172674 10173436 -18831220 + Gypsy4_I LTR Gypsy 2996 3776 -2512 8 662 1658 11 0 0 chrUextra 10173536 10173716 -18830940 + R1_DM LINE R1 5177 5356 0 8 662 4228 65 33 4 chrUextra 10173749 10174300 -18830356 + R1_DM LINE R1 1 567 -4789 8 662 326 0 23 0 chrUextra 10174400 10174443 -18830213 + NTS_DM Other Other 158 201 -39 8 662 898 9 0 35 chrUextra 10174495 10174608 -18830048 + NTS_DM Other Other 25 133 -107 8 662 1332 18 0 6 chrUextra 10174608 10174773 -18829883 + NTS_DM Other Other 38 201 -39 8 662 21 57 0 0 chrUextra 10174773 10174808 -18829848 + AT_rich Low_complexity Low_complexity 1 35 0 8 662 928 9 0 27 chrUextra 10174834 10174946 -18829710 + NTS_DM Other Other 25 133 -107 8 662 1530 20 20 20 chrUextra 10174946 10175149 -18829507 + NTS_DM Other Other 38 240 0 8 662 1800 75 3 29 chrUextra 10175264 10175524 -18829132 + STALKER4_LTR LTR Gypsy 151 399 -3 8 662 1187 40 7 13 chrUextra 10176130 10176283 -18828373 - DMCR1A LINE CR1 -4061 409 258 8 662 777 57 0 9 chrUextra 10176288 10176395 -18828261 - DMCR1A LINE CR1 -4364 106 1 8 662 25 31 0 0 chrUextra 10176673 10176705 -18827951 + AT_rich Low_complexity Low_complexity 1 32 0 8 662 3336 60 2 5 chrUextra 10176992 10177413 -18827243 - R1_DM LINE R1 -4761 595 176 8 662 3150 9 0 0 chrUextra 10177409 10177756 -18826900 + DMRT1B LINE R1 4251 4597 -586 8 662 3429 201 9 20 chrUextra 10177856 10178611 -18826045 + SAR_DM Satellite Satellite 1 746 -216 8 662 3217 180 21 29 chrUextra 10178720 10179481 -18825175 + SAR_DM Satellite Satellite 410 1164 -308 8 662 6662 21 9 1 chrUextra 10179584 10180348 -18824308 - G2_DM LINE Jockey -1806 1296 527 8 662 6735 14 0 0 chrUextra 10180448 10181212 -18823444 - Gypsy4_I LTR Gypsy -605 5683 4920 8 662 6890 7 1 1 chrUextra 10181312 10182076 -18822580 - TART LINE telomeric -34 14443 13680 8 662 1434 86 0 5 chrUextra 10182176 10182373 -18822283 + MDG1_LTR LTR Gypsy 217 412 -30 8 662 2320 95 34 11 chrUextra 10182373 10182726 -18821930 + MDG1_I LTR Gypsy 1 361 -6235 8 662 1249 84 32 14 chrUextra 10182723 10182940 -18821716 + MDG1_I LTR Gypsy 672 892 -5704 8 662 476 202 0 0 chrUextra 10183040 10183129 -18821527 - Gypsy_I LTR Gypsy -325 6182 6094 8 662 2324 45 3 37 chrUextra 10183257 10183554 -18821102 - Gypsy4_LTR LTR Gypsy 0 287 1 8 662 2326 4 0 0 chrUextra 10183554 10183804 -18820852 - Gypsy4_I LTR Gypsy 0 6288 6039 8 662 21 89 0 0 chrUextra 10184115 10184171 -18820485 + AT_rich Low_complexity Low_complexity 1 56 0 8 662 27 62 0 0 chrUextra 10184209 10184257 -18820399 + AT_rich Low_complexity Low_complexity 1 48 0 8 662 26 30 0 0 chrUextra 10184297 10184330 -18820326 + AT_rich Low_complexity Low_complexity 1 33 0 8 662 1273 40 7 0 chrUextra 10184768 10184917 -18819739 + DMRT1B LINE R1 3462 3611 -1572 8 662 5512 19 0 0 chrUextra 10184911 10185532 -18819124 + DMRT1B LINE R1 3718 4338 -845 8 662 51 31 0 0 chrUextra 10185983 10186048 -18818608 + AT_rich Low_complexity Low_complexity 1 65 0 8 662 22 35 0 0 chrUextra 10186223 10186252 -18818404 + AT_rich Low_complexity Low_complexity 1 29 0 8 662 4502 16 86 0 chrUextra 10186496 10187260 -18817396 - QUASIMODO_I LTR Gypsy -4489 1571 742 8 662 532 119 36 0 chrUextra 10187482 10187566 -18817090 - NTS_DM Other Other -150 90 4 8 662 1388 6 0 18 chrUextra 10187676 10187841 -18816815 - NTS_DM Other Other -78 162 1 8 662 1915 4 17 21 chrUextra 10187841 10188082 -18816574 - NTS_DM Other Other 0 240 1 8 662 225 0 95 71 chrUextra 10188082 10188124 -18816532 - NTS_DM Other Other 0 240 198 8 662 6445 13 24 0 chrUextra 10188224 10188988 -18815668 + STALKER4_I LTR Gypsy 2934 3715 -2815 8 662 3307 187 16 28 chrUextra 10189089 10189852 -18814804 - SAR_DM Satellite Satellite -587 753 1 8 662 3342 181 16 21 chrUextra 10189954 10190715 -18813941 + SAR_DM Satellite Satellite 425 1181 -291 8 662 3092 63 5 20 chrUextra 10190867 10191274 -18813382 + Baggins1 LINE LOA 4791 5191 -262 8 662 1248 14 0 0 chrUextra 10191680 10191824 -18812832 + DM176_I LTR Gypsy 6277 6420 0 8 662 3953 16 9 104 chrUextra 10191824 10192384 -18812272 + DM176_LTR LTR Gypsy 1 507 0 8 662 5530 85 73 12 chrUextra 10192544 10193308 -18811348 + Gypsy12_I LTR Gypsy 4666 5476 -70 8 662 4053 26 90 0 chrUextra 10193408 10194073 -18810583 + R1_DM LINE R1 4632 5356 0 8 662 546 31 0 0 chrUextra 10194106 10194171 -18810485 + R1_DM LINE R1 1 65 -5291 8 662 1077 50 50 0 chrUextra 10194272 10194413 -18810243 - MDG1_I LTR Gypsy -1048 5548 5401 8 662 4716 47 34 3 chrUextra 10194419 10195036 -18809620 - DM297_I LTR Gypsy -1816 4351 3716 8 662 3307 191 18 22 chrUextra 10195136 10195894 -18808762 - SAR_DM Satellite Satellite -596 754 1 8 662 353 158 19 56 chrUextra 10196000 10196107 -18808549 + XDMR_DM Unknown Unknown 258 360 0 8 662 3452 168 12 25 chrUextra 10196017 10196764 -18807892 - SAR_DM Satellite Satellite -354 1118 382 8 662 5829 99 0 0 chrUextra 10196864 10197628 -18807028 - HMSBEAGLE_I LTR Gypsy -1885 4644 3881 8 662 6928 3 1 1 chrUextra 10197730 10198491 -18806165 - R1_DM LINE R1 -897 4459 3699 8 662 2814 207 15 17 chrUextra 10198593 10199356 -18805300 + SAR_DM Satellite Satellite 1 761 -258 8 662 6268 3 14 0 chrUextra 10199456 10200220 -18804436 - QUASIMODO_I LTR Gypsy -165 5895 5121 8 662 4139 68 17 0 chrUextra 10200320 10200899 -18803757 + BS3_DM LINE Jockey 360 1044 -746 8 662 1520 87 0 0 chrUextra 10200889 10201084 -18803572 + BS3_DM LINE Jockey 1311 1505 -285 8 662 6251 34 17 11 chrUextra 10201184 10201948 -18802708 + BATUMI_I LTR Pao 1425 2193 -5770 8 662 1890 47 0 8 chrUextra 10202048 10202283 -18802373 + BATUMI_I LTR Pao 7731 7963 0 8 662 1895 38 4 28 chrUextra 10202305 10202552 -18802104 + BATUMI_LTR LTR Pao 32 272 0 8 662 37 0 0 0 chrUextra 10202552 10202589 -18802067 + AT_rich Low_complexity Low_complexity 1 37 0 8 662 1438 24 6 0 chrUextra 10202647 10202812 -18801844 - PROTOP_A DNA P 0 1105 940 8 662 3105 180 41 28 chrUextra 10202912 10203673 -18800983 + SAR_DM Satellite Satellite 402 1172 -300 8 662 286 262 12 0 chrUextra 10203887 10203971 -18800685 + G-rich Low_complexity Low_complexity 4 88 0 8 662 222 118 0 0 chrUextra 10203997 10204031 -18800625 + (CTG)n Simple_repeat Simple_repeat 3 36 0 8 662 237 108 0 0 chrUextra 10204075 10204112 -18800544 + (CTG)n Simple_repeat Simple_repeat 3 39 0 8 662 409 151 32 0 chrUextra 10204395 10204488 -18800168 - ROO_I LTR Pao -7521 735 640 8 662 3384 0 0 63 chrUextra 10204640 10205055 -18799601 - LSU-rRNA_Dme rRNA rRNA -3511 389 1 8 662 21 95 0 0 chrUextra 10205067 10205130 -18799526 + AT_rich Low_complexity Low_complexity 1 63 0 8 662 34 24 0 0 chrUextra 10205343 10205384 -18799272 + AT_rich Low_complexity Low_complexity 1 41 0 8 662 6614 22 3 3 chrUextra 10205504 10206268 -18798388 + R1_DM LINE R1 3990 4753 -603 8 662 6585 28 3 0 chrUextra 10206368 10207132 -18797524 - R1_DM LINE R1 -1847 3509 2744 8 662 1494 110 68 0 chrUextra 10207232 10207496 -18797160 + DMSAT6 Satellite Satellite 189 470 0 8 662 2683 97 8 39 chrUextra 10207513 10207995 -18796661 + DMSAT6 Satellite Satellite 1 467 -3 8 662 4499 2 2 0 chrUextra 10208096 10208582 -18796074 - SSU-rRNA_Dme rRNA rRNA -1056 939 453 8 662 1619 92 45 30 chrUextra 10208589 10208858 -18795798 + STALKER4_I LTR Gypsy 564 836 -5694 8 662 4359 6 0 22 chrUextra 10208958 10209456 -18795200 - QUASIMODO_I LTR Gypsy -5573 487 1 8 662 2327 4 34 4 chrUextra 10209456 10209721 -18794935 - QUASIMODO_LTR LTR Gypsy 0 658 386 8 662 1821 0 0 10 chrUextra 10209821 10210026 -18794630 + BATUMI_I LTR Pao 7761 7963 0 8 662 2413 17 0 27 chrUextra 10210026 10210319 -18794337 + BATUMI_I LTR Pao 7002 7286 -677 8 662 2154 16 0 0 chrUextra 10210309 10210558 -18794098 + G_DM LINE Jockey 638 886 -3460 8 662 1885 23 0 0 chrUextra 10210684 10210898 -18793758 - R1_DM LINE R1 -1000 4356 4143 8 662 4556 15 79 2 chrUextra 10210901 10211447 -18793209 - R1_DM LINE R1 -1469 3887 3300 8 662 6120 38 90 1 chrUextra 10211547 10212310 -18792346 + Baggins1 LINE LOA 3596 4426 -1027 8 662 228 183 33 16 chrUextra 10212410 10212471 -18792185 - Stalker2_I LTR Gypsy -7050 352 291 8 662 28 48 0 0 chrUextra 10212478 10212520 -18792136 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 3420 48 1 14 chrUextra 10212608 10213047 -18791609 - STALKER4_LTR LTR Gypsy -3 399 1 8 662 1061 24 8 0 chrUextra 10213047 10213170 -18791486 - DMCR1A LINE CR1 -562 3908 3785 8 662 6549 21 48 0 chrUextra 10213273 10214036 -18790620 + R1_DM LINE R1 3968 4767 -589 8 662 661 13 13 0 chrUextra 10214136 10214213 -18790443 - STALKER4_LTR LTR Gypsy -324 78 1 8 662 5639 12 4 3 chrUextra 10214213 10214899 -18789757 - STALKER4_I LTR Gypsy 0 6530 5844 8 662 2594 97 34 32 chrUextra 10215000 10215760 -18788896 + DMSAT6 Satellite Satellite 1 762 -119 8 662 2580 73 249 21 chrUextra 10215862 10216463 -18788193 - MAX_I LTR Pao -5960 1954 1217 8 662 580 93 341 13 chrUextra 10216447 10216599 -18788057 - MAX_I LTR Pao -6560 1354 1153 8 662 6481 35 1 0 chrUextra 10216725 10217488 -18787168 - R1_DM LINE R1 -1802 3554 2791 8 662 3204 194 13 21 chrUextra 10217589 10218351 -18786305 - SAR_DM Satellite Satellite -281 1191 436 8 662 22 35 0 0 chrUextra 10218554 10218583 -18786073 + AT_rich Low_complexity Low_complexity 1 29 0 8 662 37 39 0 0 chrUextra 10218684 10218735 -18785921 + AT_rich Low_complexity Low_complexity 1 51 0 8 662 28 48 0 0 chrUextra 10219090 10219132 -18785524 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 6811 3 1 4 chrUextra 10219325 10220077 -18784579 - R1_DM LINE R1 0 5356 4607 8 662 6792 13 1 5 chrUextra 10221040 10221803 -18782853 - LSU-rRNA_Dme rRNA rRNA -2399 1501 742 8 662 5728 26 9 60 chrUextra 10221903 10222666 -18781990 - NINJA_I LTR Pao -5057 954 231 8 82 3620 224 19 37 chrUextra 10222766 10224392 -18780264 - SAR_DM Satellite Satellite -853 1595 1 8 663 6292 14 4 0 chrUextra 10224492 10225255 -18779401 + FW_DM LINE Jockey 1004 1769 -2923 8 663 5739 49 25 3 chrUextra 10225355 10226118 -18778538 - R1_DM LINE R1 -3560 1796 1017 8 663 5042 108 3 7 chrUextra 10226218 10226981 -18777675 + Gypsy12_I LTR Gypsy 1623 2382 -3164 8 663 6660 3 0 0 chrUextra 10227081 10227844 -18776812 + LSU-rRNA_Dme rRNA rRNA 1862 2624 -1276 8 663 2838 109 14 48 chrUextra 10227961 10228461 -18776195 + Gypsy12_LTR LTR Gypsy 1831 2313 -23 8 663 623 249 21 56 chrUextra 10228473 10228707 -18775949 + TAHRE LINE telomeric 9807 10032 -431 8 663 2449 180 25 75 chrUextra 10228809 10229570 -18775086 + SAR_DM Satellite Satellite 296 1018 -454 8 663 994 110 0 0 chrUextra 10229673 10229818 -18774838 - Gypsy12_I LTR Gypsy -1693 3853 3709 8 663 3138 55 1 14 chrUextra 10229818 10230257 -18774399 - STALKER4_LTR LTR Gypsy -3 399 1 8 663 1291 11 17 0 chrUextra 10230257 10230433 -18774223 - STALKER4_I LTR Gypsy 0 6530 6352 8 663 945 34 0 0 chrUextra 10230533 10230652 -18774004 + DMCR1A LINE CR1 1754 1872 -2598 8 663 1916 94 45 0 chrUextra 10230663 10230951 -18773705 + DMCR1A LINE CR1 3220 3520 -950 8 663 2565 57 26 6 chrUextra 10230944 10231296 -18773360 + DMCR1A LINE CR1 3655 4013 -457 8 663 2865 37 45 0 chrUextra 10231396 10231776 -18772880 - IDEFIX_I LTR Gypsy -3904 1724 1328 8 663 1875 23 234 0 chrUextra 10231775 10232159 -18772497 - IDEFIX_I LTR Gypsy -4558 1070 597 8 663 1319 312 55 8 chrUextra 10232313 10233017 -18771639 + MICROPIA_I LTR Gypsy 1211 1947 -2529 8 663 1657 296 17 19 chrUextra 10233127 10233826 -18770830 + Invader1_I LTR Gypsy 1867 2564 -622 8 663 4980 107 5 3 chrUextra 10233986 10234748 -18769908 + HETA LINE telomeric 1654 2417 -3664 8 663 2777 166 21 11 chrUextra 10234853 10235611 -18769045 - BATUMI_I LTR Pao -3112 4802 3964 8 663 3733 32 80 3 chrUextra 10235711 10236474 -18768182 - R1_DM LINE R1 -149 5207 4386 8 663 6303 17 0 0 chrUextra 10236574 10237337 -18767319 + ROO_I LTR Pao 2568 3330 -4926 8 663 888 43 0 0 chrUextra 10238083 10238200 -18766456 + (TATTG)n Simple_repeat Simple_repeat 3 119 0 8 663 1282 13 0 0 chrUextra 10238300 10238456 -18766200 + ALUII_DM Unknown Unknown 85 240 0 8 663 6617 8 0 0 chrUextra 10239163 10239926 -18764730 + Invader1_I LTR Gypsy 517 1279 -1907 8 663 6022 1 4 1 chrUextra 10240026 10240789 -18763867 + DM412 LTR Gypsy 943 1707 -5190 8 663 312 259 0 0 chrUextra 10240893 10240978 -18763678 + (CTATG)n Simple_repeat Simple_repeat 1 85 0 8 663 573 115 106 29 chrUextra 10241011 10241181 -18763475 + NTS_DM Other Other 58 240 0 8 663 285 104 21 0 chrUextra 10241181 10241229 -18763427 + NTS_DM Other Other 1 49 -191 8 663 651 124 0 0 chrUextra 10241311 10241416 -18763240 + NTS_DM Other Other 1 105 -135 8 663 447 229 0 0 chrUextra 10241476 10241651 -18763005 + T-rich Low_complexity Low_complexity 4 178 0 8 663 5402 0 143 31 chrUextra 10241752 10242515 -18762141 - ROO_I LTR Pao -7190 1066 219 8 663 6547 9 1 0 chrUextra 10242615 10243378 -18761278 - Gypsy6_I LTR Gypsy -3624 3388 2625 8 663 1725 165 19 9 chrUextra 10243478 10244241 -18760415 + SAR_DM Satellite Satellite 1 770 -749 8 663 6416 8 0 0 chrUextra 10244341 10245104 -18759552 + DMRT1B LINE R1 801 1563 -3620 8 663 1435 310 33 14 chrUextra 10245204 10245967 -18758689 - ROVER-I_DM LTR Gypsy -1993 4591 3815 8 663 2977 172 16 51 chrUextra 10246069 10246828 -18757828 + SAR_DM Satellite Satellite 192 923 -549 8 663 803 117 9 14 chrUextra 10246932 10247690 -18756966 - RSP Satellite Satellite -54 753 1 8 663 6591 4 3 0 chrUextra 10247793 10248556 -18756100 + Copia2_I LTR Copia 3308 4072 -90 8 663 1266 70 5 36 chrUextra 10248656 10248850 -18755806 + BATUMI_LTR LTR Pao 84 271 -1 8 663 1443 28 0 0 chrUextra 10248850 10249026 -18755630 + (TTATA)n Simple_repeat Simple_repeat 1 176 0 8 663 1395 45 0 0 chrUextra 10249043 10249222 -18755434 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 8 663 655 154 45 56 chrUextra 10249240 10249419 -18755237 - ROVER-LTR_DM LTR Gypsy -11 356 180 8 663 2781 45 37 0 chrUextra 10249519 10249900 -18754756 + ZAM_I LTR Gypsy 7092 7486 -4 8 663 2280 85 45 3 chrUextra 10249903 10250258 -18754398 + ZAM_LTR LTR Gypsy 1 370 -102 8 663 6321 3 0 0 chrUextra 10250382 10251145 -18753511 + QUASIMODO_I LTR Gypsy 4602 5364 -696 8 663 2933 187 44 11 chrUextra 10251248 10252003 -18752653 - SAR_DM Satellite Satellite -464 1008 229 8 663 3392 168 9 9 chrUextra 10252971 10253722 -18750934 - SAR_DM Satellite Satellite -396 1076 326 8 663 1160 204 31 36 chrUextra 10253834 10254271 -18750385 + Gypsy12A_LTR LTR Gypsy 139 550 -1786 8 663 588 180 57 13 chrUextra 10254304 10254590 -18750066 + Gypsy12A_LTR LTR Gypsy 819 1151 -1129 8 663 245 133 0 0 chrUextra 10254697 10254742 -18749914 - ARS406_DM Unknown Unknown -308 45 1 8 663 3452 163 13 14 chrUextra 10254702 10255460 -18749196 + SAR_DM Satellite Satellite 246 1002 -470 8 663 1731 267 44 36 chrUextra 10255570 10256323 -18748333 + ROVER-I_DM LTR Gypsy 1352 2110 -4474 8 663 3072 196 9 9 chrUextra 10256427 10257183 -18747473 - SAR_DM Satellite Satellite -435 1037 282 8 663 1041 8 0 8 chrUextra 10257286 10257416 -18747240 + ROVER-I_DM LTR Gypsy 6456 6584 0 8 663 3054 3 0 24 chrUextra 10257416 10257792 -18746864 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 663 1233 205 0 0 chrUextra 10257792 10258049 -18746607 + ROVER-I_DM LTR Gypsy 3862 4118 -2466 8 663 2553 170 13 7 chrUextra 10258151 10258912 -18745744 + SAR_DM Satellite Satellite 1 765 -610 8 663 2322 91 28 32 chrUextra 10259012 10259775 -18744881 + DMSAT6 Satellite Satellite 1 759 -264 8 663 6371 18 0 0 chrUextra 10259875 10260638 -18744018 + R1_DM LINE R1 1685 2447 -2909 8 663 5703 45 18 1 chrUextra 10260738 10261501 -18743155 - R1_DM LINE R1 -3956 1400 625 8 663 999 0 0 0 chrUextra 10261601 10261718 -18742938 + NOMAD_I LTR Gypsy 6456 6572 0 8 663 3448 10 0 0 chrUextra 10261718 10262123 -18742533 + NOMAD_LTR LTR Gypsy 114 518 0 8 663 212 0 0 35 chrUextra 10262256 10262285 -18742371 + (TTA)n Simple_repeat Simple_repeat 2 29 0 8 663 317 104 0 0 chrUextra 10262316 10262364 -18742292 - DNAREP1_DM LINE Penelope -358 236 189 8 663 6601 1 0 1 chrUextra 10262464 10263225 -18741431 + DOC LINE Jockey 3417 4176 -549 8 663 6476 7 16 0 chrUextra 10263327 10264090 -18740566 - Gypsy4_I LTR Gypsy -2793 3495 2721 8 663 920 68 6 17 chrUextra 10264190 10264950 -18739706 - RSP Satellite Satellite -56 752 1 8 663 3919 112 89 31 chrUextra 10265053 10265816 -18738840 - R1_DM LINE R1 -3218 2138 1332 8 663 2237 111 22 17 chrUextra 10265916 10266678 -18737978 + DMSAT6 Satellite Satellite 1 765 -108 8 663 3015 189 16 25 chrUextra 10266780 10267540 -18737116 - SAR_DM Satellite Satellite -587 753 1 8 663 454 119 12 0 chrUextra 10267643 10267727 -18736929 - DMSAT6 Satellite Satellite -251 219 135 8 663 2371 106 35 11 chrUextra 10267743 10268402 -18736254 - DMSAT6 Satellite Satellite 0 675 1 8 663 6169 35 1 0 chrUextra 10268502 10269264 -18735392 + DMCR1A LINE CR1 838 1600 -2870 8 663 4678 16 11 0 chrUextra 10269365 10269915 -18734741 + R1_DM LINE R1 1870 2425 -2931 8 663 1724 10 0 19 chrUextra 10269915 10270126 -18734530 + ACCORD2_LTR LTR Gypsy 1 207 -8 8 663 786 184 35 15 chrUextra 10270226 10270425 -18734231 - SAR_DM Satellite Satellite -727 745 543 8 663 2152 191 9 19 chrUextra 10270436 10270975 -18733681 - SAR_DM Satellite Satellite -396 1076 543 8 663 2853 183 44 28 chrUextra 10271095 10271849 -18732807 - SAR_DM Satellite Satellite -255 1217 452 8 663 3362 172 9 9 chrUextra 10271950 10272700 -18731956 + SAR_DM Satellite Satellite 284 1033 -439 8 663 22 0 0 0 chrUextra 10273450 10273472 -18731184 + AT_rich Low_complexity Low_complexity 1 22 0 8 663 3163 176 9 25 chrUextra 10273674 10274421 -18730235 + SAR_DM Satellite Satellite 384 1118 -354 8 663 250 161 16 31 chrUextra 10274365 10274429 -18730227 - XDMR Unknown Unknown 0 361 299 8 663 1620 29 20 20 chrUextra 10274543 10274902 -18729754 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 8 663 5896 1 1 60 chrUextra 10275398 10276160 -18728496 + LSU-rRNA_Dme rRNA rRNA 1711 2427 -1473 8 663 1620 0 0 0 chrUextra 10276260 10276492 -18728164 + (GAGAA)n Simple_repeat Simple_repeat 1 232 0 8 663 3063 197 12 21 chrUextra 10277122 10277884 -18726772 - SAR_DM Satellite Satellite -587 755 1 8 663 450 108 40 0 chrUextra 10278850 10278924 -18725732 - DMCR1A LINE CR1 -4387 83 7 8 663 235 146 0 0 chrUextra 10278991 10279032 -18725624 + DMCR1A LINE CR1 744 784 -3686 8 663 252 208 0 0 chrUextra 10279170 10279223 -18725433 + NOMAD_I LTR Gypsy 6520 6572 0 8 663 3212 5 8 8 chrUextra 10279708 10280103 -18724553 - DM297_LTR LTR Gypsy -18 396 2 8 663 180 0 0 0 chrUextra 10280103 10280123 -18724533 + (TA)n Simple_repeat Simple_repeat 1 20 0 8 663 2988 0 0 0 chrUextra 10280123 10280470 -18724186 + ROVER-LTR_DM LTR Gypsy 2 348 -19 8 663 793 31 45 23 chrUextra 10280570 10280702 -18723954 + NTS_DM Other Other 106 240 0 8 663 1850 4 17 13 chrUextra 10280702 10280941 -18723715 + NTS_DM Other Other 1 240 0 8 663 1847 4 17 13 chrUextra 10280941 10281180 -18723476 + NTS_DM Other Other 1 240 0 8 663 1147 20 13 0 chrUextra 10281180 10281332 -18723324 + NTS_DM Other Other 1 154 -86 8 663 248 170 0 0 chrUextra 10281475 10281522 -18723134 - GTWIN_I LTR Gypsy -1444 4977 4931 8 663 244 125 0 0 chrUextra 10281585 10281625 -18723031 - BARI1 DNA Tc1 -1708 42 3 8 663 4353 29 3 38 chrUextra 10281593 10282194 -18722462 + IDEFIX_LTR LTR Gypsy 1 580 -14 8 663 246 150 0 0 chrUextra 10282334 10282374 -18722282 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 663 5088 0 16 2 chrUextra 10282447 10283056 -18721600 + G_DM LINE Jockey 1 618 -3728 8 663 2186 202 62 2 chrUextra 10283156 10283640 -18721016 + TIRANT_I LTR Gypsy 2209 2721 -4971 8 663 2283 22 4 0 chrUextra 10283640 10283918 -18720738 + PROTOP_A DNA P 1 279 -826 8 663 6015 0 28 4 chrUextra 10284040 10284780 -18719876 + ROO_I LTR Pao 1 758 -7498 8 663 6119 24 5 1 chrUextra 10284880 10285642 -18719014 + R1_DM LINE R1 2336 3100 -2256 8 663 1934 213 44 24 chrUextra 10285742 10286504 -18718152 - SAR_DM Satellite Satellite -1042 777 1 8 663 284 276 91 95 chrUextra 10286604 10286868 -18717788 + Invader1_LTR LTR Gypsy 106 368 -55 8 663 6474 3 0 0 chrUextra 10287466 10288228 -18716428 - STALKER4_I LTR Gypsy -4293 2237 1476 8 663 21 36 0 0 chrUextra 10288654 10288682 -18715974 + AT_rich Low_complexity Low_complexity 1 28 0 8 663 23 0 0 0 chrUextra 10288720 10288743 -18715913 + AT_rich Low_complexity Low_complexity 1 23 0 8 663 6289 3 1 0 chrUextra 10289190 10289951 -18714705 - STALKER4_I LTR Gypsy -4996 1534 773 8 663 6673 0 0 0 chrUextra 10290052 10290814 -18713842 - DOC LINE Jockey -685 4040 3279 8 663 4358 55 9 4 chrUextra 10290914 10291667 -18712989 - TART LINE telomeric -5618 8859 8328 8 663 6235 11 0 1 chrUextra 10291776 10292538 -18712118 - Invader2_I LTR Gypsy -1636 2956 2196 8 663 3241 176 8 18 chrUextra 10292639 10293399 -18711257 + SAR_DM Satellite Satellite 352 1103 -369 8 663 6335 20 0 0 chrUextra 10293500 10294262 -18710394 + G2_DM LINE Jockey 233 994 -2108 8 663 4296 2 2 0 chrUextra 10294362 10294858 -18709798 - LSU-rRNA_Dme rRNA rRNA -764 3136 2640 8 663 2265 11 0 4 chrUextra 10294856 10295124 -18709532 - R1_DM LINE R1 0 5356 5090 8 663 1386 0 0 0 chrUextra 10295224 10295378 -18709278 + (TCTTG)n Simple_repeat Simple_repeat 2 155 0 8 663 2971 183 43 11 chrUextra 10296087 10296834 -18707822 - SAR_DM Satellite Satellite -478 994 224 8 663 442 99 0 0 chrUextra 10296772 10296843 -18707813 + ARS406_DM Unknown Unknown 1 71 -282 8 663 745 119 58 68 chrUextra 10296948 10297138 -18707518 + ROVER-LTR_DM LTR Gypsy 180 367 0 8 663 331 93 19 0 chrUextra 10297138 10297192 -18707464 + ROVER-I_DM LTR Gypsy 1 55 -6529 8 663 220 252 26 26 chrUextra 10297560 10297674 -18706982 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 8 663 22 0 0 0 chrUextra 10297844 10297866 -18706790 + AT_rich Low_complexity Low_complexity 1 22 0 8 663 1090 61 0 0 chrUextra 10299535 10299682 -18704974 + FW2_DM LINE Jockey 825 971 -2990 8 663 4238 71 48 5 chrUextra 10299661 10300287 -18704369 + FW2_DM LINE Jockey 1328 1980 -1981 8 663 6260 12 7 5 chrUextra 10300396 10301158 -18703498 + ACCORD2_I LTR Gypsy 3875 4637 -2575 8 663 6403 16 0 0 chrUextra 10301258 10302020 -18702636 + DOC2_DM LINE Jockey 3902 4663 -130 8 663 1029 312 35 40 chrUextra 10302182 10302810 -18701846 - MICROPIA_I LTR Gypsy -3850 626 2 8 663 6483 1 1 0 chrUextra 10302982 10303744 -18700912 - LSU-rRNA_Dme rRNA rRNA -2774 1126 364 8 663 313 0 0 0 chrUextra 10303844 10303883 -18700773 - Copia2_LTR_DM LTR Copia -131 67 29 8 663 3528 12 7 0 chrUextra 10303883 10304303 -18700353 - Invader1_LTR LTR Gypsy 0 423 1 8 663 2123 19 0 0 chrUextra 10304335 10304606 -18700050 - Copia2_I LTR Copia 0 4162 3892 8 663 1749 22 57 0 chrUextra 10304706 10304933 -18699723 + DOC2_DM LINE Jockey 1455 1694 -3099 8 663 4304 14 0 0 chrUextra 10304951 10305468 -18699188 + DOC2_DM LINE Jockey 2538 3054 -1739 8 663 6372 4 0 0 chrUextra 10305568 10306330 -18698326 + STALKER4_I LTR Gypsy 3075 3836 -2694 8 663 2232 116 17 46 chrUextra 10306430 10307192 -18697464 + DMSAT6 Satellite Satellite 1 739 -74 8 663 3370 236 40 19 chrUextra 10307292 10308916 -18695740 - SAR_DM Satellite Satellite -451 1658 1 8 663 2234 104 5 58 chrUextra 10309033 10309775 -18694881 + DMSAT6 Satellite Satellite 1 703 -3 8 663 1329 28 11 6 chrUextra 10309878 10310057 -18694599 + IDEFIX_I LTR Gypsy 5449 5628 0 8 663 3296 35 211 4 chrUextra 10310057 10310549 -18694107 + IDEFIX_LTR LTR Gypsy 1 594 0 8 663 616 47 0 0 chrUextra 10310555 10310640 -18694016 - DM412 LTR Gypsy -3153 3744 3660 8 663 2253 158 151 48 chrUextra 10310741 10311502 -18693154 + TART LINE telomeric 9171 10196 -4281 8 663 4763 60 0 5 chrUextra 10311647 10312311 -18692345 + BATUMI_I LTR Pao 7303 7963 0 8 663 312 59 0 56 chrUextra 10312311 10312362 -18692294 + BATUMI_I LTR Pao 7002 7049 -914 8 663 3381 170 7 8 chrUextra 10312490 10313226 -18691430 - SAR_DM Satellite Satellite -396 1076 342 8 663 24 53 0 0 chrUextra 10313723 10313761 -18690895 + AT_rich Low_complexity Low_complexity 1 38 0 8 663 1717 5 0 0 chrUextra 10314188 10314407 -18690249 + STALKER4_I LTR Gypsy 6312 6530 0 8 663 2223 4 0 0 chrUextra 10314407 10314664 -18689992 + STALKER4_LTR LTR Gypsy 1 257 -145 8 663 1294 58 5 50 chrUextra 10314664 10314864 -18689792 - ROVER-LTR_DM LTR Gypsy 0 367 177 8 663 972 17 0 0 chrUextra 10315050 10315167 -18689489 + 5S_DM RNA RNA 19 135 0 8 663 1176 0 0 0 chrUextra 10315408 10315543 -18689113 + 5S_DM RNA RNA 1 135 0 8 663 227 0 0 0 chrUextra 10315784 10315812 -18688844 + 5S_DM RNA RNA 1 28 -107 8 663 3167 171 7 14 chrUextra 10315913 10316627 -18688029 + SAR_DM Satellite Satellite 195 903 -569 8 663 794 20 0 0 chrUextra 10316539 10316637 -18688019 - ARS406_DM Unknown Unknown -166 187 90 8 663 283 50 0 0 chrUextra 10316634 10316674 -18687982 - ARS406_DM Unknown Unknown -195 158 119 8 663 6536 1 0 0 chrUextra 10316774 10317536 -18687120 - FW_DM LINE Jockey -1743 2949 2188 8 663 6646 3 0 0 chrUextra 10317638 10318398 -18686258 - Invader1_I LTR Gypsy -673 2513 1754 8 663 3379 201 11 7 chrUextra 10318498 10319260 -18685396 - Stalker2_I LTR Gypsy -2748 4654 3890 8 663 2512 65 3 0 chrUextra 10319360 10319715 -18684941 - XDMR Unknown Unknown -5 356 1 8 663 2498 64 6 0 chrUextra 10319715 10320074 -18684582 - XDMR Unknown Unknown 0 361 1 8 663 513 200 41 61 chrUextra 10319915 10320112 -18684544 + SAR_DM Satellite Satellite 200 392 -1080 8 663 422 34 0 17 chrUextra 10320062 10320122 -18684534 - XDMR_DM Unknown Unknown -18 342 284 8 663 1193 65 0 6 chrUextra 10320224 10320393 -18684263 + (TATTG)n Simple_repeat Simple_repeat 2 169 0 8 663 5124 86 64 11 chrUextra 10321084 10321846 -18682810 + Gypsy12_I LTR Gypsy 4445 5247 -299 8 663 3431 0 2 0 chrUextra 10321946 10322339 -18682317 - LSU-rRNA_Dme rRNA rRNA -1719 2181 1788 8 663 2729 0 6 3 chrUextra 10322383 10322708 -18681948 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1463 8 663 504 88 0 0 chrUextra 10322808 10322888 -18681768 - ROO_I LTR Pao -2745 5511 5432 8 663 5333 24 41 0 chrUextra 10322870 10323570 -18681086 - ROO_I LTR Pao -2970 5286 4558 8 663 2827 45 5 16 chrUextra 10323670 10324058 -18680598 + BATUMI_I LTR Pao 6618 7001 -962 8 663 2779 78 20 8 chrUextra 10324018 10324432 -18680224 - BATUMI_I LTR Pao -1543 6420 6068 8 663 6505 11 0 0 chrUextra 10324532 10325294 -18679362 - Copia2_I LTR Copia -23 4139 3378 8 663 6328 7 0 0 chrUextra 10325394 10326156 -18678500 + Invader2_I LTR Gypsy 1849 2610 -1982 8 663 991 71 49 103 chrUextra 10326256 10326459 -18678197 + Gypsy6_LTR LTR Gypsy 213 404 -3 8 663 1536 0 0 0 chrUextra 10326459 10326631 -18678025 + SSU-rRNA_Dme rRNA rRNA 1824 1995 0 8 663 21 89 0 0 chrUextra 10326650 10326706 -18677950 + AT_rich Low_complexity Low_complexity 1 56 0 8 663 6596 3 0 0 chrUextra 10327118 10327880 -18676776 + Gypsy4_I LTR Gypsy 1425 2186 -4102 8 663 1134 29 0 0 chrUextra 10327980 10328118 -18676538 + (TATAA)n Simple_repeat Simple_repeat 1 138 0 8 663 2208 25 0 27 chrUextra 10328118 10328409 -18676247 - BATUMI_I LTR Pao -679 7284 7002 8 663 2783 3 0 6 chrUextra 10328409 10328742 -18675914 - BATUMI_I LTR Pao 0 7963 7633 8 663 6439 3 4 1 chrUextra 10328842 10329604 -18675052 - LSU-rRNA_Dme rRNA rRNA -2552 1348 585 8 663 2027 279 16 16 chrUextra 10329713 10330464 -18674192 + FROGGER_I LTR Copia 1148 1898 -179 8 663 6124 21 4 1 chrUextra 10330566 10331328 -18673328 - R1_DM LINE R1 -1325 4031 3268 8 663 200 0 100 0 chrUextra 10331819 10331859 -18672797 + (TA)n Simple_repeat Simple_repeat 1 44 0 8 663 3298 171 12 8 chrUextra 10332293 10333041 -18671615 + SAR_DM Satellite Satellite 326 1076 -396 8 663 40 21 0 0 chrUextra 10333365 10333412 -18671244 + AT_rich Low_complexity Low_complexity 1 47 0 8 663 1414 23 140 32 chrUextra 10333428 10333678 -18670978 - Gypsy4_I LTR Gypsy -5911 377 1 8 663 1607 53 8 47 chrUextra 10333678 10333914 -18670742 - Gypsy4_LTR LTR Gypsy 0 287 61 8 663 240 100 0 0 chrUextra 10334389 10334429 -18670227 + (A)n Simple_repeat Simple_repeat 1 40 0 8 663 1834 301 10 10 chrUextra 10334934 10335638 -18669018 - MICROPIA_I LTR Gypsy -1828 2648 1945 8 663 5834 22 7 29 chrUextra 10335738 10336500 -18668156 - Gypsy12_LTR LTR Gypsy -31 2305 1561 8 663 1135 149 67 13 chrUextra 10336600 10336824 -18667832 + Gypsy12_LTR LTR Gypsy 2101 2336 0 8 663 3005 100 43 30 chrUextra 10336824 10337362 -18667294 + Gypsy12_I LTR Gypsy 1 545 -5001 8 663 2405 103 13 11 chrUextra 10337469 10338224 -18666432 + DMSAT6 Satellite Satellite 1 756 -74 8 663 6554 5 0 0 chrUextra 10338325 10339086 -18665570 - R1_DM LINE R1 -571 4785 4025 8 663 6525 0 3 0 chrUextra 10339186 10339948 -18664708 - Stalker2_I LTR Gypsy -6636 766 3 8 663 1625 5 0 0 chrUextra 10340048 10340234 -18664422 + PROTOP_A DNA P 920 1105 0 8 663 4326 25 59 23 chrUextra 10340234 10340810 -18663846 + CIRCE LINE Composite 2424 3020 -3336 8 663 2952 3 3 3 chrUextra 10340910 10341258 -18663398 - LSU-rRNA_Dme rRNA rRNA -913 2987 2640 8 663 3601 2 0 0 chrUextra 10341256 10341672 -18662984 - R1_DM LINE R1 0 5356 4941 8 663 3354 108 0 9 chrUextra 10341772 10342296 -18662360 - DMRT1B LINE R1 -1531 3652 3134 8 663 477 285 67 0 chrUextra 10342327 10342492 -18662164 + Gypsy12_I LTR Gypsy 3154 3329 -2217 8 663 497 126 0 11 chrUextra 10342736 10342824 -18661832 + G3_DM LINE Jockey 103 189 -4416 8 663 359 138 92 0 chrUextra 10342919 10342984 -18661672 + G3_DM LINE Jockey 509 579 -4026 8 663 572 81 115 0 chrUextra 10343496 10343583 -18661073 + ACCORD2_I LTR Gypsy 7108 7204 -8 8 663 585 195 76 19 chrUextra 10343644 10343801 -18660855 + ACCORD2_LTR LTR Gypsy 45 210 -5 8 663 46 0 0 0 chrUextra 10343991 10344037 -18660619 + AT_rich Low_complexity Low_complexity 1 46 0 8 663 1371 24 0 0 chrUextra 10344358 10344525 -18660131 + (TATAA)n Simple_repeat Simple_repeat 2 168 0 8 663 2690 30 0 0 chrUextra 10344525 10344856 -18659800 - DM1731_LTR LTR Copia -1 335 5 8 663 1538 23 0 4 chrUextra 10344856 10345120 -18659536 + (TATAA)n Simple_repeat Simple_repeat 1 262 0 8 663 3264 24 15 0 chrUextra 10346081 10346490 -18658166 + DMCR1A LINE CR1 2930 3344 -1126 8 663 2482 33 91 0 chrUextra 10346512 10346842 -18657814 + DMCR1A LINE CR1 3411 3770 -700 8 663 2259 85 10 0 chrUextra 10346942 10347322 -18657334 - HETA LINE telomeric -9 6072 5745 8 663 385 109 86 11 chrUextra 10347315 10347408 -18657248 - TART LINE telomeric -4851 9626 9527 8 663 208 200 31 0 chrUextra 10347591 10347656 -18657000 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 663 3391 172 9 7 chrUextra 10347803 10348552 -18656104 - SAR_DM Satellite Satellite -396 1076 326 8 663 5755 14 3 8 chrUextra 10348664 10349391 -18655265 - STALKER4_I LTR Gypsy -4744 1786 1064 8 663 3360 163 9 20 chrUextra 10349527 10350286 -18654370 - SAR_DM Satellite Satellite -353 1119 369 8 663 1915 171 5 5 chrUextra 10350395 10351147 -18653509 + SAR_DM Satellite Satellite 1 752 -581 8 663 6413 1 3 5 chrUextra 10351247 10352005 -18652651 + LSU-rRNA_Dme rRNA rRNA 884 1639 -2261 8 663 6488 5 0 0 chrUextra 10352108 10352869 -18651787 + DM176_I LTR Gypsy 3787 4547 -1873 8 663 888 80 0 0 chrUextra 10352971 10353109 -18651547 + ARS406_DM Unknown Unknown 22 159 -194 8 663 1773 166 25 10 chrUextra 10353115 10353728 -18650928 - SAR_DM Satellite Satellite -569 622 1 8 663 28 48 0 0 chrUextra 10353983 10354025 -18650631 + AT_rich Low_complexity Low_complexity 1 42 0 8 663 486 129 24 0 chrUextra 10354298 10354383 -18650273 - NTS_DM Other Other -150 90 4 8 663 667 11 0 31 chrUextra 10354493 10354591 -18650065 - NTS_DM Other Other -78 162 68 8 664 6243 17 3 0 chrUextra 10354691 10355452 -18649204 + DOC2_DM LINE Jockey 2684 3446 -1347 8 664 5271 2 0 0 chrUextra 10355552 10356159 -18648497 - Copia_I LTR Copia -3986 607 1 8 664 1280 0 0 0 chrUextra 10356159 10356313 -18648343 - Copia_LTR LTR Copia 0 276 123 8 664 6102 16 8 5 chrUextra 10357275 10358035 -18646621 - LSU-rRNA_Dme rRNA rRNA -2132 1768 1007 8 664 5659 3 0 0 chrUextra 10358135 10358783 -18645873 - MICROPIA_I LTR Gypsy -3828 648 1 8 664 925 0 0 9 chrUextra 10358783 10358893 -18645763 - MICROPIA_LTR LTR Gypsy 0 476 368 8 664 2025 0 0 0 chrUextra 10359056 10359296 -18645360 - ALUII_DM Unknown Unknown 0 240 1 8 664 21 57 0 0 chrUextra 10359296 10359331 -18645325 + AT_rich Low_complexity Low_complexity 1 35 0 8 664 22 35 0 0 chrUextra 10359528 10359557 -18645099 + AT_rich Low_complexity Low_complexity 1 29 0 8 664 36 40 0 0 chrUextra 10359658 10359708 -18644948 + AT_rich Low_complexity Low_complexity 1 50 0 8 664 6041 17 21 0 chrUextra 10359857 10360616 -18644040 - DM176_I LTR Gypsy -4280 2140 1366 8 664 2969 185 17 27 chrUextra 10360718 10361474 -18643182 + SAR_DM Satellite Satellite 1 748 -216 8 664 2274 184 11 9 chrUextra 10361579 10362335 -18642321 - SAR_DM Satellite Satellite -691 756 1 8 664 285 236 45 45 chrUextra 10362565 10362698 -18641958 - Invader6_I LTR Gypsy -3027 1072 940 8 664 324 282 30 8 chrUextra 10362805 10362937 -18641719 - Invader4_I LTR Gypsy -2278 135 1 8 664 2762 165 44 24 chrUextra 10364264 10364923 -18639733 + TART LINE telomeric 8869 9540 -4937 8 664 21 89 0 0 chrUextra 10365130 10365186 -18639470 + AT_rich Low_complexity Low_complexity 1 56 0 8 664 5004 0 3 2 chrUextra 10365205 10365784 -18638872 - SSU-rRNA_Dme rRNA rRNA 0 1995 1416 8 664 411 244 112 4 chrUextra 10365910 10366151 -18638505 - Gypsy8_I LTR Gypsy -4570 2083 1857 8 664 1403 88 15 0 chrUextra 10366146 10366350 -18638306 - Gypsy8_I LTR Gypsy -3867 480 274 8 664 1267 101 16 53 chrUextra 10366318 10366641 -18638015 + DMSAT6 Satellite Satellite 99 409 -61 8 664 34 24 0 0 chrUextra 10367138 10367179 -18637477 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 21 95 0 0 chrUextra 10367392 10367455 -18637201 + AT_rich Low_complexity Low_complexity 1 63 0 8 664 327 0 0 0 chrUextra 10367467 10367506 -18637150 + LSU-rRNA_Dme rRNA rRNA 1 39 -3861 8 664 3130 188 14 22 chrUextra 10367606 10368367 -18636289 + SAR_DM Satellite Satellite 1 755 -227 8 664 6392 7 4 7 chrUextra 10368467 10369228 -18635428 - DM1731_I LTR Copia -36 3940 3182 8 664 6022 4 0 0 chrUextra 10369328 10370024 -18634632 + Copia2_I LTR Copia 3467 4162 0 8 664 496 0 0 0 chrUextra 10370024 10370089 -18634567 + Copia2_LTR_DM LTR Copia 1 65 -133 8 664 3359 17 0 0 chrUextra 10371050 10371453 -18633203 - PROTOP_A DNA P -702 403 1 8 664 2245 85 30 55 chrUextra 10371453 10371811 -18632845 + Gypsy12_I LTR Gypsy 4568 4916 -630 8 664 3362 32 214 2 chrUextra 10372176 10372672 -18631984 - DIVER2_I LTR Pao -1705 2442 1842 8 664 6492 17 1 0 chrUextra 10372772 10373533 -18631123 + R2_DM LINE R2 1050 1811 -1796 8 664 5754 25 26 0 chrUextra 10373633 10374394 -18630262 + IVK_DM LINE I 984 1764 -3638 8 664 6079 25 50 0 chrUextra 10374494 10375255 -18629401 - MAX_I LTR Pao -1577 6337 5539 8 664 25 31 0 0 chrUextra 10375508 10375540 -18629116 + AT_rich Low_complexity Low_complexity 1 32 0 8 664 4408 18 39 0 chrUextra 10375572 10376116 -18628540 + G2_DM LINE Jockey 1523 2087 -1015 8 664 1837 0 0 0 chrUextra 10376216 10376425 -18628231 - LSU-rRNA_Dme rRNA rRNA -1904 1996 1788 8 664 4208 2 6 6 chrUextra 10376469 10376977 -18627679 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1281 8 664 719 287 66 49 chrUextra 10377177 10377836 -18626820 + TABOR_I LTR Gypsy 2344 3432 -3465 8 664 2832 173 11 9 chrUextra 10377938 10378584 -18626072 - SAR_DM Satellite Satellite -500 972 326 8 664 736 0 0 0 chrUextra 10378612 10378699 -18625957 + FW_DM LINE Jockey 515 601 -4091 8 664 32 0 0 0 chrUextra 10378864 10378896 -18625760 + AT_rich Low_complexity Low_complexity 1 32 0 8 664 4677 2 0 0 chrUextra 10379028 10379560 -18625096 + SSU-rRNA_Dme rRNA rRNA 1 532 -1463 8 664 362 0 0 0 chrUextra 10379660 10379701 -18624955 - NTS_DM Other Other -162 78 38 8 664 870 9 0 27 chrUextra 10379701 10379813 -18624843 - NTS_DM Other Other -107 133 25 8 664 22 56 0 0 chrUextra 10379839 10379875 -18624781 + AT_rich Low_complexity Low_complexity 1 36 0 8 664 230 150 0 0 chrUextra 10379888 10379928 -18624728 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 246 150 0 0 chrUextra 10379971 10380011 -18624645 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 246 150 0 0 chrUextra 10380063 10380103 -18624553 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 246 150 0 0 chrUextra 10380155 10380195 -18624461 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 22 56 0 0 chrUextra 10380200 10380236 -18624420 + AT_rich Low_complexity Low_complexity 1 36 0 8 664 951 0 0 0 chrUextra 10380313 10380421 -18624235 - LSU-rRNA_Dme rRNA rRNA 0 3900 3793 8 664 2960 67 26 0 chrUextra 10380521 10380938 -18623718 + R1_DM LINE R1 306 733 -4623 8 664 2723 55 0 0 chrUextra 10380934 10381282 -18623374 + R1_DM LINE R1 1224 1571 -3785 8 664 6526 9 3 0 chrUextra 10381382 10382143 -18622513 - Gypsy6_I LTR Gypsy -3223 3789 3027 8 664 6265 8 4 0 chrUextra 10382243 10383004 -18621652 + STALKER4_I LTR Gypsy 4732 5495 -1035 8 664 2898 63 5 17 chrUextra 10383458 10383864 -18620792 + Baggins1 LINE LOA 4791 5191 -262 8 664 6282 11 17 7 chrUextra 10383965 10384723 -18619933 - Gypsy4_I LTR Gypsy -3990 2298 1533 8 664 895 252 135 34 chrUextra 10384827 10385530 -18619126 - ROVER-I_DM LTR Gypsy -5413 1171 398 8 664 5947 35 0 0 chrUextra 10385687 10386429 -18618227 + TART_B1 LINE telomeric 3030 3771 -6883 8 664 1779 119 37 28 chrUextra 10386548 10386901 -18617755 + Stalker2_I LTR Gypsy 538 893 -6509 8 664 2441 153 104 0 chrUextra 10387545 10387995 -18616661 + Gypsy_I LTR Gypsy 3936 4432 -2075 8 664 592 174 52 40 chrUextra 10387996 10388170 -18616486 - G_DM LINE Jockey -9 4337 4162 8 664 1669 0 0 10 chrUextra 10388270 10388472 -18616184 - BATUMI_I LTR Pao -5 7958 7759 8 664 3305 44 25 0 chrUextra 10388480 10388915 -18615741 - ROO_I LTR Pao -337 7919 7474 8 664 881 27 9 0 chrUextra 10388908 10389019 -18615637 - ROO_I LTR Pao -1000 7256 7145 8 664 957 0 9 0 chrUextra 10389132 10389246 -18615410 - NTS_DM Other Other -125 115 1 8 664 1825 8 17 13 chrUextra 10389246 10389485 -18615171 - NTS_DM Other Other 0 240 1 8 664 1756 17 17 17 chrUextra 10389485 10389725 -18614931 - NTS_DM Other Other 0 240 1 8 664 1082 18 24 24 chrUextra 10389725 10389892 -18614764 - NTS_DM Other Other 0 240 74 8 664 6446 3 1 3 chrUextra 10389992 10390753 -18613903 - R1_DM LINE R1 -860 4496 3737 8 664 6319 17 3 0 chrUextra 10390853 10391614 -18613042 + DMRT1B LINE R1 2709 3471 -1712 8 664 28 48 0 0 chrUextra 10391936 10391978 -18612678 + AT_rich Low_complexity Low_complexity 1 42 0 8 664 488 119 36 0 chrUextra 10392251 10392335 -18612321 - NTS_DM Other Other -150 90 4 8 664 6273 20 8 0 chrUextra 10392575 10393334 -18611322 + Copia2_I LTR Copia 2134 2898 -1264 8 664 686 269 0 0 chrUextra 10393556 10393738 -18610918 + Gypsy3_I LTR Gypsy 2578 2759 -3418 8 664 820 182 0 0 chrUextra 10393733 10393887 -18610769 + Gypsy6_I LTR Gypsy 4549 4702 -2310 8 664 672 273 0 0 chrUextra 10393889 10394072 -18610584 + Gypsy3_I LTR Gypsy 2577 2759 -3418 8 664 606 215 0 0 chrUextra 10394067 10394197 -18610459 + Gypsy6_I LTR Gypsy 4549 4678 -2334 8 664 3418 164 14 13 chrUextra 10394297 10395056 -18609600 - SAR_DM Satellite Satellite -441 1031 272 8 664 321 109 0 18 chrUextra 10395338 10395394 -18609262 + SAR_DM Satellite Satellite 444 498 -974 8 664 350 44 0 0 chrUextra 10395350 10395395 -18609261 - ARS406_DM Unknown Unknown -164 189 145 8 664 1350 23 0 0 chrUextra 10395414 10395587 -18609069 - ARS406_DM Unknown Unknown -180 173 1 8 664 282 252 0 18 chrUextra 10395491 10395604 -18609052 + SAR_DM Satellite Satellite 192 302 -1170 8 664 6527 3 0 3 chrUextra 10396019 10396780 -18607876 + G_DM LINE Jockey 2546 3304 -1042 8 664 4389 6 0 8 chrUextra 10396880 10397410 -18607246 + LINEJ1_DM LINE Jockey 4482 5007 -13 8 664 28 71 0 0 chrUextra 10397488 10397544 -18607112 + AT_rich Low_complexity Low_complexity 1 56 0 8 664 29 47 0 0 chrUextra 10397582 10397625 -18607031 + AT_rich Low_complexity Low_complexity 1 43 0 8 664 492 311 21 18 chrUextra 10398220 10398502 -18606154 - Gypsy4_I LTR Gypsy -2815 3473 3191 8 664 671 64 0 0 chrUextra 10398602 10398696 -18605960 + ROO_LTR LTR Pao 335 428 0 8 664 249 133 44 0 chrUextra 10398729 10398774 -18605882 + ROO_I LTR Pao 114 160 -8096 8 664 4900 7 5 0 chrUextra 10398773 10399362 -18605294 - DOC LINE Jockey 0 4725 4134 8 664 5548 0 1 0 chrUextra 10399463 10400134 -18604522 + ROO_I LTR Pao 7585 8256 0 8 664 767 0 0 0 chrUextra 10400134 10400224 -18604432 + ROO_LTR LTR Pao 1 90 -338 8 664 29 0 0 0 chrUextra 10400612 10400641 -18604015 + AT_rich Low_complexity Low_complexity 1 29 0 8 664 21 0 0 0 chrUextra 10400662 10400683 -18603973 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 37 23 0 0 chrUextra 10400774 10400818 -18603838 + AT_rich Low_complexity Low_complexity 1 44 0 8 664 21 0 0 0 chrUextra 10400839 10400860 -18603796 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 1276 193 11 24 chrUextra 10401194 10401481 -18603175 - Gypsy12_LTR LTR Gypsy -2041 295 13 8 664 2954 80 108 7 chrUextra 10401493 10401946 -18602710 - Gypsy12_I LTR Gypsy 0 5546 5048 8 664 5231 2 3 0 chrUextra 10402046 10402650 -18602006 - LSU-rRNA_Dme rRNA rRNA -655 3245 2640 8 664 1401 0 0 0 chrUextra 10402648 10402807 -18601849 - R1_DM LINE R1 0 5356 5198 8 664 693 103 241 0 chrUextra 10403134 10403279 -18601377 + FB4_DM DNA Tc1 3 182 -3907 8 664 250 33 0 0 chrUextra 10403287 10403317 -18601339 - Baggins1 LINE LOA -697 4756 4727 8 664 27 29 0 0 chrUextra 10403556 10403590 -18601066 + AT_rich Low_complexity Low_complexity 1 34 0 8 664 6242 17 3 0 chrUextra 10403768 10404529 -18600127 + PROTOP DNA P 1968 2730 -1750 8 664 2824 182 61 23 chrUextra 10404629 10405380 -18599276 + SAR_DM Satellite Satellite 438 1217 -255 8 664 457 67 0 0 chrUextra 10405330 10405390 -18599266 - ARS406_DM Unknown Unknown -164 189 130 8 664 1359 38 22 5 chrUextra 10405490 10405674 -18598982 - TART LINE telomeric -12246 2231 2045 8 664 3936 60 131 0 chrUextra 10405665 10406251 -18598405 - TART LINE telomeric -12618 1859 1197 8 664 2361 67 37 6 chrUextra 10406351 10406699 -18597957 - CIRCE LINE Composite -1017 5339 4981 8 664 506 17 0 0 chrUextra 10407053 10407112 -18597544 - CIRCE LINE Composite -1376 4980 4922 8 664 649 234 79 0 chrUextra 10407216 10407430 -18597226 + Invader5_I LTR Gypsy 1435 1665 -1669 8 664 889 146 135 3 chrUextra 10407428 10407615 -18597041 + Invader1_I LTR Gypsy 1429 1623 -1563 8 664 3594 0 0 0 chrUextra 10408073 10408497 -18596159 + HMSBEAGLE_I LTR Gypsy 6106 6529 0 8 664 2291 11 0 0 chrUextra 10408497 10408763 -18595893 + DMLTR5 LTR Gypsy 1 266 0 8 664 207 225 0 0 chrUextra 10408763 10408834 -18595822 + (TA)n Simple_repeat Simple_repeat 2 72 0 8 664 3792 95 70 105 chrUextra 10408934 10409695 -18594961 - Gypsy12_I LTR Gypsy -3789 1757 1024 8 664 6304 11 0 0 chrUextra 10409795 10410556 -18594100 - Invader2_I LTR Gypsy -1325 3267 2507 8 664 6646 0 1 1 chrUextra 10410656 10411417 -18593239 + LSU-rRNA_Dme rRNA rRNA 3066 3826 -74 8 664 4364 19 0 0 chrUextra 10411517 10412043 -18592613 - PROTOP_A DNA P -579 526 1 8 664 2904 189 24 14 chrUextra 10412379 10413139 -18591517 + SAR_DM Satellite Satellite 191 957 -515 8 664 2856 189 13 17 chrUextra 10413240 10413999 -18590657 + SAR_DM Satellite Satellite 1 756 -255 8 664 6246 24 0 0 chrUextra 10414100 10414861 -18589795 + R1_DM LINE R1 2068 2828 -2528 8 664 5466 14 21 22 chrUextra 10414961 10415685 -18588971 - ROO_I LTR Pao -7533 723 1 8 664 278 54 0 0 chrUextra 10415685 10415722 -18588934 - ROO_LTR LTR Pao 0 428 392 8 664 335 296 19 19 chrUextra 10415867 10416029 -18588627 - MDG3_I LTR Gypsy -1562 3424 3263 8 664 296 321 7 7 chrUextra 10416315 10416456 -18588200 - Invader2_I LTR Gypsy -1843 2749 2624 8 664 6466 11 0 0 chrUextra 10417544 10418305 -18586351 - DMRT1A LINE R1 -2281 2902 2142 8 664 572 176 55 21 chrUextra 10419266 10419411 -18585245 + TART LINE telomeric 9417 9566 -4911 8 664 3340 104 154 15 chrUextra 10419410 10420027 -18584629 + HETA LINE telomeric 7123 7825 -6652 8 664 6439 3 0 0 chrUextra 10420127 10420888 -18583768 + STALKER4_I LTR Gypsy 2487 3247 -3283 8 664 6159 0 28 0 chrUextra 10421849 10422610 -18582046 - ROO_I LTR Pao -7293 963 182 8 664 6242 8 0 0 chrUextra 10422714 10423470 -18581186 + STALKER4_I LTR Gypsy 2685 3440 -3090 8 664 4741 32 28 34 chrUextra 10423597 10424330 -18580326 + HETA LINE telomeric 3808 4386 -1695 8 664 2349 27 3 23 chrUextra 10424430 10424738 -18579918 + G5_DM LINE Jockey 4555 4856 0 8 664 774 76 0 18 chrUextra 10424742 10425190 -18579466 - RSP Satellite Satellite -13 440 1 8 664 2290 101 55 15 chrUextra 10425291 10426035 -18578621 + DMSAT6 Satellite Satellite 1 774 -40 8 664 4682 95 108 17 chrUextra 10426150 10426910 -18577746 + Gypsy12_I LTR Gypsy 4624 5452 -94 8 664 1077 265 40 6 chrUextra 10427010 10427333 -18577323 - BS2 LINE Jockey -1667 3054 2721 8 664 1164 167 104 20 chrUextra 10427334 10427633 -18577023 - MDG1_LTR LTR Gypsy -30 412 89 8 664 1031 23 0 22 chrUextra 10427635 10427770 -18576886 + (TTA)n Simple_repeat Simple_repeat 1 132 0 8 664 6394 3 5 0 chrUextra 10427870 10428630 -18576026 + ROO_I LTR Pao 1323 2086 -6170 8 664 6359 1 18 0 chrUextra 10428730 10429490 -18575166 + ROO_I LTR Pao 5812 6585 -1671 8 664 6484 3 1 4 chrUextra 10429590 10430350 -18574306 - SSU-rRNA_Dme rRNA rRNA -535 1460 703 8 664 5712 29 34 16 chrUextra 10431310 10432070 -18572586 - DIVER2_I LTR Pao -1582 2565 1792 8 664 6431 1 0 1 chrUextra 10432174 10432930 -18571726 - ROO_I LTR Pao -6265 1991 1237 8 664 25 0 0 0 chrUextra 10433166 10433191 -18571465 + AT_rich Low_complexity Low_complexity 1 25 0 8 664 1827 5 5 0 chrUextra 10433572 10433790 -18570866 + IDEFIX_I LTR Gypsy 1 219 -5409 8 664 945 0 0 0 chrUextra 10433890 10434000 -18570656 - LSU-rRNA_Dme rRNA rRNA -3790 110 1 8 664 34 24 0 0 chrUextra 10434289 10434330 -18570326 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 774 142 45 0 chrUextra 10434750 10434884 -18569772 - DNAREP1_DM LINE Penelope -151 443 304 8 664 1109 22 0 0 chrUextra 10435610 10435747 -18568909 + R1_DM LINE R1 4930 5066 -290 8 664 954 26 0 0 chrUextra 10435744 10435858 -18568798 + R1_DM LINE R1 5243 5356 0 8 664 3107 67 5 7 chrUextra 10435891 10436327 -18568329 + R1_DM LINE R1 1 435 -4921 8 664 337 21 42 0 chrUextra 10436322 10436370 -18568286 + R1_DM LINE R1 1101 1150 -4206 8 664 4838 70 70 0 chrUextra 10436470 10437230 -18567426 + STALKER4_I LTR Gypsy 4614 5426 -1104 8 664 6167 16 0 0 chrUextra 10437330 10438090 -18566566 + ROO_I LTR Pao 2774 3533 -4723 8 664 2996 189 9 13 chrUextra 10438195 10438945 -18565711 - SAR_DM Satellite Satellite -514 958 212 8 664 1930 0 0 0 chrUextra 10439074 10439296 -18565360 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 664 21 95 0 0 chrUextra 10439308 10439371 -18565285 + AT_rich Low_complexity Low_complexity 1 63 0 8 664 34 24 0 0 chrUextra 10439585 10439626 -18565030 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 1754 128 22 0 chrUextra 10439910 10440268 -18564388 - TART_B1 LINE telomeric -8438 2216 1851 8 664 3298 20 2 0 chrUextra 10440268 10440670 -18563986 + PROTOP_A DNA P 1 403 -702 8 664 21 0 0 0 chrUextra 10440898 10440919 -18563737 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 1262 48 0 0 chrUextra 10440950 10441116 -18563540 + Gypsy10_LTR LTR Gypsy 1 166 -198 8 664 2867 201 20 22 chrUextra 10441638 10442388 -18562268 - SAR_DM Satellite Satellite -569 748 1 8 664 30 45 0 0 chrUextra 10442533 10442577 -18562079 + AT_rich Low_complexity Low_complexity 1 44 0 8 664 690 50 60 0 chrUextra 10442726 10442826 -18561830 - DNAREP1_DM LINE Penelope -488 106 1 8 664 50 80 0 0 chrUextra 10442899 10443012 -18561644 + AT_rich Low_complexity Low_complexity 1 113 0 8 664 2606 92 28 46 chrUextra 10443350 10444101 -18560555 - DMSAT6 Satellite Satellite -85 737 1 8 664 2180 164 33 12 chrUextra 10444210 10444703 -18559953 - TART LINE telomeric -5095 9382 8954 8 664 22 56 0 0 chrUextra 10444847 10444883 -18559773 + AT_rich Low_complexity Low_complexity 1 36 0 8 664 5544 99 1 3 chrUextra 10445070 10445830 -18558826 + HETA LINE telomeric 1729 2487 -3594 8 664 3403 33 22 20 chrUextra 10445957 10446690 -18557966 - HETRP_DM Satellite Satellite -916 734 1 8 664 3560 186 8 8 chrUextra 10446792 10447550 -18557106 - SAR_DM Satellite Satellite -443 1029 272 8 664 3343 175 15 23 chrUextra 10447652 10448393 -18556263 + SAR_DM Satellite Satellite 425 1159 -313 8 664 6698 18 21 0 chrUextra 10448510 10449270 -18555386 - R1_DM LINE R1 -2639 2717 1942 8 664 3633 181 13 9 chrUextra 10449371 10450130 -18554526 + SAR_DM Satellite Satellite 257 1018 -454 8 664 236 0 0 0 chrUextra 10450230 10450256 -18554400 - LSU-rRNA_Dme rRNA rRNA -3874 26 1 8 664 21 95 0 0 chrUextra 10450268 10450331 -18554325 + AT_rich Low_complexity Low_complexity 1 63 0 8 664 34 24 0 0 chrUextra 10450544 10450585 -18554071 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 7007 0 0 0 chrUextra 10451090 10451850 -18552806 + DOC LINE Jockey 264 1023 -3702 8 664 6744 12 1 1 chrUextra 10451950 10452710 -18551946 - Gypsy4_I LTR Gypsy -496 5792 5033 8 664 6217 3 3 60 chrUextra 10452810 10453570 -18551086 - LSU-rRNA_Dme rRNA rRNA -1647 2253 1538 8 664 6384 19 88 0 chrUextra 10453670 10454430 -18550226 - R1_DM LINE R1 -144 5212 4386 8 664 342 211 105 0 chrUextra 10454632 10454727 -18549929 - ROVER-I_DM LTR Gypsy -6479 105 1 8 664 2043 81 51 70 chrUextra 10454727 10455101 -18549555 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 664 1649 26 0 0 chrUextra 10455101 10455290 -18549366 - CIRCE LINE Composite -1983 4373 4185 8 664 2921 215 26 9 chrUextra 10455390 10456146 -18548510 + SAR_DM Satellite Satellite 438 1206 -266 8 664 4798 4 70 3 chrUextra 10456250 10457010 -18547646 - BS2 LINE Jockey -996 3725 2915 8 664 3739 128 1 1 chrUextra 10457111 10457870 -18546786 + Gypsy2_I LTR Gypsy 4097 5281 -1731 8 664 1084 77 22 196 chrUextra 10457970 10458246 -18546410 + FB4_DM DNA Tc1 842 1069 -3020 8 664 983 146 93 43 chrUextra 10458300 10458558 -18546098 + FB4_DM DNA Tc1 2775 3045 -1044 8 664 269 61 0 0 chrUextra 10458553 10458586 -18546070 - FB4_DM DNA Tc1 -4020 69 37 8 664 1484 6 0 63 chrUextra 10458839 10459028 -18545628 - CIRCE LINE Composite -2228 4128 3952 8 664 2291 12 0 8 chrUextra 10459023 10459282 -18545374 - CIRCE LINE Composite -2584 3772 3516 8 664 452 125 14 0 chrUextra 10459374 10459446 -18545210 - Gypsy8_LTR LTR Gypsy -231 73 1 8 664 893 82 7 49 chrUextra 10459448 10459590 -18545066 - Invader2_I LTR Gypsy -567 4025 3890 8 664 6955 0 0 0 chrUextra 10459690 10460450 -18544206 - QUASIMODO_I LTR Gypsy -3521 2539 1780 8 664 6895 11 0 0 chrUextra 10460550 10461309 -18543347 - R1_DM LINE R1 -1549 3807 3049 8 664 6584 24 1 1 chrUextra 10461410 10462170 -18542486 - R1_DM LINE R1 -1170 4186 3427 8 664 6500 30 0 3 chrUextra 10462270 10463030 -18541626 + R1_DM LINE R1 2198 2955 -2401 8 664 5312 5 62 4 chrUextra 10463130 10463890 -18540766 + STALKER4_I LTR Gypsy 2970 3773 -2757 8 664 3687 25 22 5 chrUextra 10463990 10464437 -18540219 - BATUMI_I LTR Pao -7508 455 1 8 664 2118 26 30 15 chrUextra 10464437 10464705 -18539951 - BATUMI_LTR LTR Pao 0 272 1 8 664 31 0 0 0 chrUextra 10464870 10464901 -18539755 + AT_rich Low_complexity Low_complexity 1 31 0 8 664 453 82 0 0 chrUextra 10465193 10465252 -18539404 - PROTOP DNA P -1 4479 4420 8 664 1574 59 45 0 chrUextra 10465252 10465454 -18539202 + PROTOP_B DNA P 1 211 -942 8 664 1138 31 0 0 chrUextra 10465481 10465610 -18539046 - PROTOP DNA P -76 4404 4276 8 664 6738 22 0 0 chrUextra 10465710 10466470 -18538186 - R1_DM LINE R1 -2832 2524 1765 8 664 3619 112 96 30 chrUextra 10466578 10467330 -18537326 + TAHRE LINE telomeric 9843 10452 -11 8 664 369 171 0 0 chrUextra 10467432 10467520 -18537136 + GA-rich Low_complexity Low_complexity 1 88 0 8 664 1602 0 0 0 chrUextra 10467522 10467700 -18536956 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 8 664 6017 48 0 1 chrUextra 10468290 10469050 -18535606 - IDEFIX_I LTR Gypsy -1105 4523 3765 8 664 1859 94 0 15 chrUextra 10469150 10469419 -18535237 + IDEFIX_I LTR Gypsy 2845 3109 -2519 8 664 3235 84 8 6 chrUextra 10469433 10469910 -18534746 + IDEFIX_I LTR Gypsy 3381 3858 -1770 8 664 4180 0 2 0 chrUextra 10470010 10470511 -18534145 - DM176_I LTR Gypsy -324 6096 5595 8 664 2238 4 0 0 chrUextra 10470510 10470770 -18533886 - DM176_I LTR Gypsy -1464 4956 4697 8 664 228 292 85 0 chrUextra 10470873 10470979 -18533677 - QUASIMODO_I LTR Gypsy -3008 3052 2938 8 664 22 35 0 0 chrUextra 10471035 10471064 -18533592 + AT_rich Low_complexity Low_complexity 1 29 0 8 664 181 77 0 71 chrUextra 10471096 10471138 -18533518 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 8 664 6500 7 14 0 chrUextra 10471730 10472490 -18532166 + QUASIMODO_I LTR Gypsy 3710 4480 -1580 8 664 6746 8 0 0 chrUextra 10472590 10473350 -18531306 - PROTOP DNA P -689 3791 3032 8 664 5866 42 0 4 chrUextra 10473450 10474151 -18530505 - MAX_I LTR Pao -4749 3165 2468 8 664 684 25 0 0 chrUextra 10474129 10474210 -18530446 - MAX_I LTR Pao -5870 2044 1964 8 664 6565 20 40 1 chrUextra 10475170 10475930 -18528726 - R1_DM LINE R1 -738 4618 3830 8 664 6380 43 4 1 chrUextra 10476030 10476790 -18527866 - R1_DM LINE R1 -3806 1550 789 8 664 4483 33 26 0 chrUextra 10476890 10477434 -18527222 + FW_DM LINE Jockey 4135 4692 0 8 664 273 29 0 0 chrUextra 10477442 10477476 -18527180 - R1_DM LINE R1 -3966 1390 1357 8 664 1430 40 6 6 chrUextra 10477476 10477650 -18527006 - R1_DM LINE R1 -4150 1206 1033 8 664 352 45 0 0 chrUextra 10477750 10477794 -18526862 - ARS406_DM Unknown Unknown -220 133 90 8 664 2871 194 29 27 chrUextra 10477791 10478509 -18526147 + SAR_DM Satellite Satellite 1 719 -203 8 664 1566 26 0 0 chrUextra 10478814 10479123 -18525533 + (CAAGA)n Simple_repeat Simple_repeat 1 309 0 8 664 4766 13 0 0 chrUextra 10479470 10480004 -18524652 + FW_DM LINE Jockey 4158 4691 -1 8 664 670 172 96 38 chrUextra 10480024 10480214 -18524442 + TART LINE telomeric 9364 9542 -4935 8 664 7043 4 0 0 chrUextra 10480330 10481090 -18523566 - DM1731_I LTR Copia -363 3613 2854 8 664 2777 0 0 7 chrUextra 10481190 10481490 -18523166 + BLOOD_LTR LTR Gypsy 102 399 0 8 664 889 44 9 0 chrUextra 10481490 10481589 -18523067 + DM297_I LTR Gypsy 1993 2092 -4075 8 664 2114 8 0 0 chrUextra 10481584 10481826 -18522830 + DM297_I LTR Gypsy 5926 6167 0 8 664 1049 16 8 8 chrUextra 10481827 10481950 -18522706 + DM297_LTR LTR Gypsy 1 123 -291 8 664 1088 180 25 15 chrUextra 10482070 10482810 -18521846 - SAR_DM Satellite Satellite -396 747 1 8 664 2403 19 0 0 chrUextra 10482910 10483181 -18521475 + MDG1_LTR LTR Gypsy 172 442 0 8 664 4482 2 0 0 chrUextra 10483181 10483669 -18520987 + MDG1_I LTR Gypsy 1 488 -6108 8 664 6915 0 3 0 chrUextra 10483773 10484530 -18520126 + DOC LINE Jockey 1101 1859 -2866 8 664 331 323 49 20 chrUextra 10484986 10485180 -18519476 + BLASTOPIA_I LTR Gypsy 3541 3925 -1061 8 10 6905 1 0 0 chrUextra 10485490 10486250 -18518406 + ACCORD2_I LTR Gypsy 2487 3246 -3966 8 665 6890 7 0 1 chrUextra 10486350 10487110 -18517546 - STALKER4_I LTR Gypsy -1688 4842 4084 8 665 6206 44 12 1 chrUextra 10487216 10487970 -18516686 + R1_DM LINE R1 614 1375 -3981 8 665 1478 192 31 63 chrUextra 10488096 10488541 -18516115 + Gypsy_LTR LTR Gypsy 1 431 -51 8 665 597 73 0 12 chrUextra 10488672 10488755 -18515901 + Jockey2 LINE Jockey 1 82 -3346 8 665 357 118 28 42 chrUextra 10488759 10488830 -18515826 + Gypsy5_LTR LTR Gypsy 77 146 -284 8 665 3738 113 42 70 chrUextra 10488930 10489690 -18514966 - PROTOP_B DNA P -183 970 232 8 665 3924 16 0 22 chrUextra 10489790 10490251 -18514405 - DM176_LTR LTR Gypsy -56 451 1 8 665 2328 57 0 0 chrUextra 10490252 10490550 -18514106 - MDG1_I LTR Gypsy -836 5760 5463 8 665 6942 12 0 1 chrUextra 10490650 10491410 -18513246 + Invader1_I LTR Gypsy 3 761 -2425 8 665 3437 166 46 22 chrUextra 10491510 10492270 -18512386 + SAR_DM Satellite Satellite 256 1033 -439 8 665 1221 36 6 6 chrUextra 10492370 10492539 -18512117 - HETRP_DM Satellite Satellite -1691 181 13 8 665 3364 47 34 28 chrUextra 10492651 10493116 -18511540 - HETRP_DM Satellite Satellite -916 956 489 8 665 4143 113 108 14 chrUextra 10493230 10493990 -18510666 - TART LINE telomeric -6799 7678 6960 8 665 814 37 0 115 chrUextra 10494224 10494346 -18510310 + Baggins1 LINE LOA 5346 5453 0 8 665 489 79 0 0 chrUextra 10494786 10494849 -18509807 + Baggins1 LINE LOA 4791 4853 -600 8 665 6740 4 17 12 chrUextra 10494950 10495710 -18508946 + MAX_I LTR Pao 902 1665 -6249 8 665 499 133 100 0 chrUextra 10496453 10496543 -18508113 + DNAREP1_DM LINE Penelope 496 594 0 8 665 6489 33 21 0 chrUextra 10496670 10497430 -18507226 - R1_DM LINE R1 -2013 3343 2568 8 665 2646 162 139 19 chrUextra 10497554 10498253 -18506403 - TART LINE telomeric -4745 9732 8950 8 665 5026 84 60 8 chrUextra 10498390 10499112 -18505544 + HETA LINE telomeric 5199 5957 -124 8 665 258 62 0 0 chrUextra 10499118 10499150 -18505506 + Invader4_LTR LTR Gypsy 1 32 -314 8 665 6853 12 0 0 chrUextra 10499250 10500000 -18504656 - Gypsy6_I LTR Gypsy -1762 5250 4501 8 665 2632 203 17 18 chrUextra 10500128 10500837 -18503819 - SAR_DM Satellite Satellite -396 1076 369 8 665 46 0 0 0 chrUextra 10501663 10501709 -18502947 + AT_rich Low_complexity Low_complexity 1 46 0 8 665 5188 2 2 0 chrUextra 10501827 10502420 -18502236 - SSU-rRNA_Dme rRNA rRNA -1401 594 1 8 665 32 0 0 0 chrUextra 10502552 10502584 -18502072 + AT_rich Low_complexity Low_complexity 1 32 0 8 665 6585 3 0 0 chrUextra 10502686 10503445 -18501211 + FW_DM LINE Jockey 3353 4111 -581 8 665 1416 136 185 26 chrUextra 10503847 10504150 -18500506 - DMRT1B LINE R1 -18 5165 4815 8 665 2665 3 10 0 chrUextra 10504404 10504715 -18499941 - Invader1_LTR LTR Gypsy -109 314 1 8 665 315 49 0 0 chrUextra 10504833 10504874 -18499782 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 665 445 233 8 16 chrUextra 10504874 10504996 -18499660 + HETRP_DM Satellite Satellite 1549 1669 -203 8 665 282 56 0 0 chrUextra 10505127 10505163 -18499493 + (GA)n Simple_repeat Simple_repeat 2 37 0 8 665 1266 45 11 6 chrUextra 10505267 10505446 -18499210 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 8 665 195 69 0 0 chrUextra 10505464 10505493 -18499163 + (TTATA)n Simple_repeat Simple_repeat 1 29 0 8 665 579 180 21 21 chrUextra 10505757 10505899 -18498757 + TAHRE LINE telomeric 10304 10445 -18 8 665 4481 53 2 12 chrUextra 10506122 10506767 -18497889 + MDG1_I LTR Gypsy 5567 6204 -392 8 665 437 109 59 0 chrUextra 10506760 10506879 -18497777 + MDG1_I LTR Gypsy 6395 6520 -76 8 665 28 48 0 0 chrUextra 10507140 10507182 -18497474 + AT_rich Low_complexity Low_complexity 1 42 0 8 665 32 0 0 0 chrUextra 10507510 10507542 -18497114 + AT_rich Low_complexity Low_complexity 1 32 0 8 665 555 15 0 0 chrUextra 10507674 10507740 -18496916 + SSU-rRNA_Dme rRNA rRNA 1 66 -1929 8 665 1288 30 0 0 chrUextra 10507841 10508007 -18496649 - NTS_DM Other Other -74 166 1 8 665 1408 20 20 20 chrUextra 10508007 10508210 -18496446 - NTS_DM Other Other 0 240 38 8 665 817 0 0 0 chrUextra 10508210 10508306 -18496350 - NTS_DM Other Other -107 133 38 8 665 832 9 9 27 chrUextra 10508306 10508417 -18496239 - NTS_DM Other Other -107 133 25 8 665 21 57 0 0 chrUextra 10508443 10508478 -18496178 + AT_rich Low_complexity Low_complexity 1 35 0 8 665 818 25 0 8 chrUextra 10508478 10508599 -18496057 - NTS_DM Other Other -39 201 82 8 665 3205 167 12 23 chrUextra 10508702 10509455 -18495201 - SAR_DM Satellite Satellite -359 1113 369 8 665 3255 167 16 21 chrUextra 10509559 10510317 -18494339 + SAR_DM Satellite Satellite 246 999 -473 8 665 5261 10 2 5 chrUextra 10510417 10511044 -18493612 - QUASIMODO_I LTR Gypsy -5435 625 1 8 665 1028 8 0 15 chrUextra 10511044 10511176 -18493480 - QUASIMODO_LTR LTR Gypsy 0 658 529 8 665 1368 32 0 5 chrUextra 10511276 10511465 -18493191 + FW_DM LINE Jockey 4505 4692 0 8 665 254 29 0 0 chrUextra 10511472 10511506 -18493150 - R1_DM LINE R1 -3966 1390 1357 8 665 3822 38 68 2 chrUextra 10511506 10512033 -18492623 - R1_DM LINE R1 -4150 1206 645 8 665 2773 200 18 9 chrUextra 10512157 10512894 -18491762 - SAR_DM Satellite Satellite -396 1076 334 8 665 555 118 0 0 chrUextra 10513668 10513753 -18490903 + (TA)n Simple_repeat Simple_repeat 2 86 0 8 665 6503 8 1 0 chrUextra 10513856 10514612 -18490044 - LINEJ1_DM LINE Jockey -95 4925 4169 8 665 6423 9 1 1 chrUextra 10514712 10515471 -18489185 - DOC2_DM LINE Jockey -966 3827 3069 8 665 4218 58 81 27 chrUextra 10515572 10516212 -18488444 - CIRCE LINE Composite -3479 2877 2203 8 665 633 23 139 0 chrUextra 10516241 10516327 -18488329 - CIRCE LINE Composite -4474 1882 1785 8 665 6057 33 0 4 chrUextra 10516430 10517187 -18487469 - R1_DM LINE R1 -717 4639 3886 8 665 3331 160 15 14 chrUextra 10517292 10518022 -18486634 + SAR_DM Satellite Satellite 346 1076 -396 8 665 1587 14 0 0 chrUextra 10518148 10518504 -18486152 + (TAGA)n Simple_repeat Simple_repeat 1 356 0 8 665 456 72 0 0 chrUextra 10518505 10518574 -18486082 + (ATCG)n Simple_repeat Simple_repeat 3 71 0 8 665 1177 56 0 30 chrUextra 10518574 10518907 -18485749 + (TAGA)n Simple_repeat Simple_repeat 1 322 0 8 665 965 50 0 92 chrUextra 10519104 10519257 -18485399 - Baggins1 LINE LOA 0 5453 5315 8 665 1699 33 124 0 chrUextra 10519253 10519494 -18485162 - Baggins1 LINE LOA -456 4997 4727 8 665 26 30 0 0 chrUextra 10519733 10519766 -18484890 + AT_rich Low_complexity Low_complexity 1 33 0 8 665 2719 32 0 39 chrUextra 10520267 10520625 -18484031 - Baggins1 LINE LOA 0 5453 5110 8 665 3922 103 104 34 chrUextra 10520728 10521484 -18483172 + BATUMI_I LTR Pao 821 1629 -6334 8 665 4281 62 3 5 chrUextra 10521584 10522165 -18482491 - R1_DM LINE R1 -4776 580 1 8 665 1198 28 0 0 chrUextra 10522198 10522343 -18482313 - R1_DM LINE R1 0 5356 5212 8 665 569 29 0 0 chrUextra 10522443 10522513 -18482143 - NTS_DM Other Other -133 107 38 8 665 817 0 0 0 chrUextra 10522513 10522609 -18482047 - NTS_DM Other Other -107 133 38 8 665 819 19 9 27 chrUextra 10522609 10522720 -18481936 - NTS_DM Other Other -107 133 25 8 665 21 57 0 0 chrUextra 10522746 10522781 -18481875 + AT_rich Low_complexity Low_complexity 1 35 0 8 665 1195 25 6 6 chrUextra 10522781 10522945 -18481711 - NTS_DM Other Other -39 201 38 8 665 848 18 0 27 chrUextra 10522945 10523057 -18481599 - NTS_DM Other Other -107 133 25 8 665 480 85 0 12 chrUextra 10523119 10523202 -18481454 - NTS_DM Other Other -39 201 120 8 665 4998 3 0 0 chrUextra 10523302 10523919 -18480737 + Invader2_I LTR Gypsy 3973 4589 -3 8 665 1196 0 7 0 chrUextra 10523922 10524061 -18480595 + Invader2_LTR LTR Gypsy 1 140 -126 8 665 3301 73 51 38 chrUextra 10524161 10524920 -18479736 + PROTOP_A DNA P 403 1134 -19 8 665 3448 22 92 11 chrUextra 10525020 10525477 -18479179 + R1_DM LINE R1 3173 3666 -1690 8 665 2484 7 0 0 chrUextra 10525487 10525779 -18478877 + R1_DM LINE R1 4026 4317 -1039 8 665 6484 1 1 1 chrUextra 10525879 10526638 -18478018 + FW_DM LINE Jockey 1652 2410 -2282 8 665 3151 181 9 19 chrUextra 10526739 10527494 -18477162 + SAR_DM Satellite Satellite 371 1118 -354 8 665 6577 1 0 0 chrUextra 10527597 10528356 -18476300 + DOC LINE Jockey 2350 3108 -1617 8 665 2209 78 95 6 chrUextra 10528456 10528803 -18475853 - DMRT1A LINE R1 -4805 378 1 8 665 3147 49 0 0 chrUextra 10528805 10529215 -18475441 - DOC3_DM LINE Jockey -4110 630 221 8 665 235 186 0 0 chrUextra 10529479 10529522 -18475134 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 8 665 4030 2 0 0 chrUextra 10529602 10530074 -18474582 - G_DM LINE Jockey -3 4343 3872 8 665 3329 71 7 4 chrUextra 10530174 10530638 -18474018 - R1_DM LINE R1 -4891 465 1 8 665 2212 19 0 0 chrUextra 10530671 10530933 -18473723 - R1_DM LINE R1 0 5356 5095 8 665 575 40 0 0 chrUextra 10531033 10531109 -18473547 - ARS406_DM Unknown Unknown -188 165 90 8 665 2605 207 14 20 chrUextra 10531108 10531790 -18472866 + SAR_DM Satellite Satellite 1 677 -216 8 665 6349 3 1 1 chrUextra 10531892 10532651 -18472005 - ROO_I LTR Pao -1166 7090 6332 8 665 1625 24 14 0 chrUextra 10532751 10532963 -18471693 - BATUMI_I LTR Pao -1322 6641 6427 8 665 4272 13 0 2 chrUextra 10532986 10533510 -18471146 + BATUMI_I LTR Pao 7303 7825 -138 8 665 6263 24 0 0 chrUextra 10533610 10534369 -18470287 - R1_DM LINE R1 -3147 2209 1451 8 665 734 11 0 0 chrUextra 10535133 10535228 -18469428 - ALUII_DM Unknown Unknown 0 240 146 8 665 5182 26 30 3 chrUextra 10535328 10536087 -18468569 - STALKER4_I LTR Gypsy -2650 3880 3047 8 665 5053 2 3 7 chrUextra 10536187 10536788 -18467868 - G2_DM LINE Jockey -1305 1797 1199 8 665 1494 0 0 0 chrUextra 10536774 10536946 -18467710 - G2_DM LINE Jockey -2340 762 591 8 665 6415 1 4 4 chrUextra 10537046 10537805 -18466851 + LSU-rRNA_Dme rRNA rRNA 807 1565 -2335 8 665 3174 3 0 0 chrUextra 10537905 10538277 -18466379 + DOC LINE Jockey 1648 2019 -2706 8 665 9744 71 0 14 chrUextra 10538271 10539523 -18465133 + DOC LINE Jockey 3124 4357 -368 8 665 5700 4 0 7 chrUextra 10539623 10540301 -18464355 + DM412 LTR Gypsy 208 880 -6017 8 665 519 13 50 12 chrUextra 10540302 10540382 -18464274 + DM412 LTR Gypsy 820 902 -5995 8 665 5617 20 132 1 chrUextra 10540482 10541239 -18463417 + R1_DM LINE R1 3604 4459 -897 8 665 286 265 47 39 chrUextra 10541498 10541744 -18462912 + IDEFIX_I LTR Gypsy 3729 3858 -1770 8 665 327 137 0 0 chrUextra 10541746 10541797 -18462859 + DNAREP1_DM LINE Penelope 1 51 -543 8 665 356 85 0 0 chrUextra 10541796 10541855 -18462801 - IDEFIX_I LTR Gypsy -4618 1010 952 8 665 39 22 0 0 chrUextra 10541866 10541912 -18462744 + AT_rich Low_complexity Low_complexity 1 46 0 8 665 5903 28 70 0 chrUextra 10542200 10542959 -18461697 - R1_DM LINE R1 -2448 2908 2097 8 665 3531 7 0 0 chrUextra 10543059 10543475 -18461181 - Copia2_I LTR Copia -3746 416 1 8 665 1665 5 0 0 chrUextra 10543475 10543672 -18460984 - Copia2_LTR_DM LTR Copia 0 198 2 8 665 1182 27 0 0 chrUextra 10543672 10543818 -18460838 + (TTA)n Simple_repeat Simple_repeat 2 147 0 8 665 4101 14 13 4 chrUextra 10543918 10544611 -18460045 - ACCORD_I LTR Gypsy -5765 523 1 8 665 505 30 0 0 chrUextra 10544611 10544677 -18459979 - ACCORD_LTR LTR Gypsy 0 558 493 8 665 2025 150 16 7 chrUextra 10544777 10545200 -18459456 - SAR_DM Satellite Satellite -666 806 380 8 665 2163 37 183 3 chrUextra 10545213 10545536 -18459120 + DOC2_DM LINE Jockey 10 390 -4403 8 665 244 128 0 21 chrUextra 10545640 10545688 -18458968 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 665 244 128 0 21 chrUextra 10545933 10545981 -18458675 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 665 6374 13 0 1 chrUextra 10546495 10547254 -18457402 + DOC2_DM LINE Jockey 3877 4634 -159 8 665 5475 46 25 4 chrUextra 10547355 10548113 -18456543 - R1_DM LINE R1 -4312 1044 271 8 665 4376 152 0 0 chrUextra 10548213 10548970 -18455686 + HETA LINE telomeric 2590 3346 -2735 8 665 3334 169 42 8 chrUextra 10549072 10549831 -18454825 - SAR_DM Satellite Satellite -435 1037 253 8 665 6284 15 3 0 chrUextra 10549931 10550674 -18453982 + Copia2_I LTR Copia 1846 2590 -1572 8 665 422 0 19 0 chrUextra 10550790 10550842 -18453814 - SSU-rRNA_Dme rRNA rRNA -1942 53 1 8 665 32 0 0 0 chrUextra 10550974 10551006 -18453650 + AT_rich Low_complexity Low_complexity 1 32 0 8 665 28 48 0 0 chrUextra 10551334 10551376 -18453280 + AT_rich Low_complexity Low_complexity 1 42 0 8 665 779 72 24 8 chrUextra 10552009 10552135 -18452521 - STALKER4_I LTR Gypsy -5645 885 758 8 665 672 180 39 54 chrUextra 10552201 10552406 -18452250 - ROVER-LTR_DM LTR Gypsy 0 367 166 8 665 2194 99 121 30 chrUextra 10552517 10553055 -18451601 - TART LINE telomeric -7157 7320 6734 8 665 225 277 20 74 chrUextra 10553117 10553265 -18451391 - TART LINE telomeric -1492 12985 12846 8 665 6185 30 0 0 chrUextra 10553367 10554126 -18450530 + R1_DM LINE R1 2713 3471 -1885 8 665 5298 93 0 1 chrUextra 10554226 10554983 -18449673 - HETA LINE telomeric -3319 2762 2007 8 665 700 42 32 32 chrUextra 10555085 10555209 -18449447 + NTS_DM Other Other 117 240 0 8 665 1734 21 17 17 chrUextra 10555209 10555449 -18449207 + NTS_DM Other Other 1 240 0 8 665 1836 8 17 13 chrUextra 10555449 10555688 -18448968 + NTS_DM Other Other 1 240 0 8 665 1285 0 6 0 chrUextra 10555688 10555844 -18448812 + NTS_DM Other Other 1 157 -83 8 665 471 16 78 0 chrUextra 10555948 10556012 -18448644 - Invader2_LTR LTR Gypsy -197 69 1 8 665 674 142 306 13 chrUextra 10556012 10556302 -18448354 - HMSBEAGLE_I LTR Gypsy -356 6173 5797 8 665 2024 108 29 0 chrUextra 10556313 10556627 -18448029 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 8 665 368 119 0 0 chrUextra 10556644 10556703 -18447953 - HMSBEAGLE_I LTR Gypsy -3360 3169 3111 8 665 3650 175 7 8 chrUextra 10556803 10557562 -18447094 + SAR_DM Satellite Satellite 298 1055 -417 8 665 3059 183 57 22 chrUextra 10558521 10559275 -18445381 - SAR_DM Satellite Satellite -361 1111 332 8 665 988 180 80 90 chrUextra 10559498 10559810 -18444846 - TIRANT_LTR LTR Gypsy -108 309 1 8 665 2715 174 46 12 chrUextra 10560239 10560996 -18443660 + SAR_DM Satellite Satellite 326 1264 -208 8 665 1891 17 17 21 chrUextra 10561124 10561360 -18443296 - BATUMI_I LTR Pao -679 7284 7050 8 665 90 10 0 0 chrUextra 10561360 10561457 -18443199 + AT_rich Low_complexity Low_complexity 1 97 0 8 665 215 157 42 14 chrUextra 10561457 10561528 -18443128 + (TA)n Simple_repeat Simple_repeat 1 73 0 8 665 2481 35 3 22 chrUextra 10561534 10561857 -18442799 - BATUMI_I LTR Pao -5889 2074 1758 8 665 6331 38 1 0 chrUextra 10561957 10562712 -18441944 + TAHRE LINE telomeric 5102 5857 -4606 8 665 28 48 0 0 chrUextra 10562938 10562980 -18441676 + AT_rich Low_complexity Low_complexity 1 42 0 8 665 276 111 0 0 chrUextra 10563200 10563245 -18441411 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 665 6670 1 1 0 chrUextra 10563675 10564434 -18440222 - BLOOD_I LTR Gypsy -2757 3856 3097 8 665 3446 178 8 12 chrUextra 10564543 10565293 -18439363 - SAR_DM Satellite Satellite -514 958 212 8 665 3322 236 51 18 chrUextra 10565400 10566993 -18437663 + SAR_DM Satellite Satellite 1 1644 -396 8 665 3577 175 9 8 chrUextra 10567972 10568727 -18435929 + SAR_DM Satellite Satellite 282 1037 -435 8 665 2196 4 0 0 chrUextra 10568829 10569090 -18435566 + ROO_I LTR Pao 7996 8256 0 8 665 3906 2 0 0 chrUextra 10569090 10569518 -18435138 + ROO_LTR LTR Pao 1 428 0 8 665 2381 25 28 0 chrUextra 10569688 10569973 -18434683 - R1_DM LINE R1 -1573 3783 3491 8 665 3917 32 2 0 chrUextra 10569975 10570447 -18434209 - R1_DM LINE R1 -2388 2968 2496 8 665 5854 41 32 11 chrUextra 10570547 10571305 -18433351 - R1_DM LINE R1 -4105 1251 478 8 665 426 20 0 0 chrUextra 10571405 10571456 -18433200 + (TTCTC)n Simple_repeat Simple_repeat 5 55 0 8 665 3201 200 12 21 chrUextra 10572268 10573016 -18431640 + SAR_DM Satellite Satellite 1 741 -216 8 665 5668 29 0 0 chrUextra 10573121 10573777 -18430879 - CIRCE LINE Composite -273 6083 5428 8 665 3296 177 9 20 chrUextra 10573992 10574737 -18429919 - SAR_DM Satellite Satellite -354 1118 382 8 665 3046 0 0 0 chrUextra 10574837 10575167 -18429489 - ROO_LTR LTR Pao -98 330 1 8 665 3625 14 0 0 chrUextra 10575167 10575595 -18429061 - DM297_I LTR Gypsy -4430 1737 1310 8 665 2969 174 56 27 chrUextra 10575695 10576409 -18428247 - HETA LINE telomeric -706 5375 4641 8 665 6574 11 0 0 chrUextra 10576553 10577311 -18427345 - IDEFIX_I LTR Gypsy -4087 1541 784 8 665 3576 172 11 9 chrUextra 10577411 10578164 -18426492 + SAR_DM Satellite Satellite 303 1056 -416 8 665 6019 4 4 61 chrUextra 10579127 10579885 -18424771 - LSU-rRNA_Dme rRNA rRNA -1606 2294 1580 8 665 6822 7 0 0 chrUextra 10579985 10580743 -18423913 + R1_DM LINE R1 3929 4686 -670 8 665 3204 32 3 0 chrUextra 10580843 10581223 -18423433 - R1_DM LINE R1 -417 4939 4559 8 665 3232 16 3 3 chrUextra 10581221 10581601 -18423055 - R1_DM LINE R1 -1270 4086 3707 8 665 3436 179 21 14 chrUextra 10581701 10582447 -18422209 + SAR_DM Satellite Satellite 1 750 -411 8 665 362 94 412 0 chrUextra 10583232 10583317 -18421339 + FB4_DM DNA Tc1 3 122 -3967 8 665 599 0 0 0 chrUextra 10583417 10583482 -18421174 - NTS_DM Other Other -175 65 1 8 665 1910 0 17 17 chrUextra 10583482 10583722 -18420934 - NTS_DM Other Other 0 240 1 8 665 1930 4 17 13 chrUextra 10583722 10583961 -18420695 - NTS_DM Other Other 0 240 1 8 665 1583 19 19 19 chrUextra 10583961 10584175 -18420481 - NTS_DM Other Other 0 240 27 8 665 4696 4 2 0 chrUextra 10584280 10584796 -18419860 + SSU-rRNA_Dme rRNA rRNA 1479 1995 0 8 665 2111 294 16 16 chrUextra 10585134 10585891 -18418765 - FROGGER_I LTR Copia -349 1728 972 8 665 5071 70 34 17 chrUextra 10585991 10586749 -18417907 + HETA LINE telomeric 4600 5370 -711 8 665 2719 32 20 0 chrUextra 10586849 10587196 -18417460 - PROTOP DNA P -2465 2015 1662 8 665 3299 25 5 0 chrUextra 10587205 10587607 -18417049 - PROTOP DNA P -3893 587 184 8 665 2871 133 83 36 chrUextra 10587707 10588465 -18416191 + STALKER4_I LTR Gypsy 354 1195 -5335 8 665 5355 22 53 0 chrUextra 10588565 10589323 -18415333 - DMRT1B LINE R1 -1944 3239 2442 8 665 385 261 114 96 chrUextra 10589825 10590105 -18414551 - Invader1_LTR LTR Gypsy -55 368 84 8 665 2691 80 30 12 chrUextra 10590281 10591038 -18413618 - DMSAT6 Satellite Satellite -100 771 1 8 665 6817 4 1 0 chrUextra 10591139 10591897 -18412759 + R1_DM LINE R1 4505 5263 -93 8 665 944 88 7 0 chrUextra 10591997 10592134 -18412522 + DIVER2_LTR LTR Pao 248 385 0 8 665 3197 171 19 38 chrUextra 10592857 10593612 -18411044 + SAR_DM Satellite Satellite 425 1164 -308 8 665 6626 13 1 3 chrUextra 10593713 10594471 -18410185 - R1_DM LINE R1 -169 5187 4431 8 665 3530 247 22 43 chrUextra 10594579 10596137 -18408519 + SAR_DM Satellite Satellite 1 1525 -261 8 665 1147 65 0 0 chrUextra 10596034 10596187 -18408469 - ARS406_DM Unknown Unknown -164 189 37 8 665 378 135 33 33 chrUextra 10596304 10596396 -18408260 + XDMR_DM Unknown Unknown 259 350 -10 8 665 1049 291 26 27 chrUextra 10596320 10597026 -18407630 - SAR_DM Satellite Satellite -351 1121 260 8 665 6063 28 1 16 chrUextra 10597145 10597903 -18406753 + ROO_I LTR Pao 1552 2298 -5958 8 665 3236 185 8 7 chrUextra 10598003 10598727 -18405929 - SAR_DM Satellite Satellite -581 891 167 8 665 1053 78 7 0 chrUextra 10598608 10598761 -18405895 + ARS406_DM Unknown Unknown 1 154 -199 8 665 1795 297 14 18 chrUextra 10598954 10599613 -18405043 - Invader1_I LTR Gypsy -618 2568 1913 8 665 719 67 19 0 chrUextra 10599719 10599824 -18404832 - ARS406_DM Unknown Unknown -246 107 1 8 665 2988 195 23 11 chrUextra 10599730 10600467 -18404189 + SAR_DM Satellite Satellite 192 937 -535 8 665 1620 0 0 0 chrUextra 10600580 10600760 -18403896 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 665 240 307 64 59 chrUextra 10600786 10600990 -18403666 - OSVALDO_I LTR Gypsy -3733 2920 2716 8 665 1558 93 83 4 chrUextra 10601064 10601335 -18403321 - BS4_DM LINE Jockey -177 577 337 8 665 6345 19 3 1 chrUextra 10601435 10602193 -18402463 + G_DM LINE Jockey 1918 2676 -1670 8 665 614 73 0 0 chrUextra 10602299 10602381 -18402275 - Jockey2 LINE Jockey -3346 82 1 8 665 1478 194 29 59 chrUextra 10602512 10602956 -18401700 - Gypsy_LTR LTR Gypsy -51 431 1 8 665 492 131 36 0 chrUextra 10603370 10603454 -18401202 - NTS_DM Other Other -150 90 4 8 665 1355 6 0 18 chrUextra 10603564 10603729 -18400927 - NTS_DM Other Other -78 162 1 8 665 1243 6 33 22 chrUextra 10603729 10603909 -18400747 - NTS_DM Other Other 0 240 59 8 665 625 79 8 137 chrUextra 10604009 10604126 -18400530 + Gypsy12_I LTR Gypsy 3773 3874 -1672 8 665 4866 92 0 0 chrUextra 10604124 10604767 -18399889 + Gypsy12_I LTR Gypsy 4206 4848 -698 8 665 295 51 0 0 chrUextra 10604867 10604906 -18399750 - ARS406_DM Unknown Unknown -225 128 90 8 665 3077 192 19 25 chrUextra 10604905 10605624 -18399032 + SAR_DM Satellite Satellite 1 715 -203 8 665 489 250 21 16 chrUextra 10605726 10605917 -18398739 - XDMR_DM Unknown Unknown -151 209 18 8 665 2798 194 11 18 chrUextra 10605755 10606481 -18398175 + SAR_DM Satellite Satellite 151 871 -601 8 665 6645 0 1 1 chrUextra 10606583 10607341 -18397315 - ROO_I LTR Pao -2753 5503 4746 8 665 4369 10 0 0 chrUextra 10607441 10607930 -18396726 + TABOR_LTR LTR Gypsy 18 506 0 8 665 2376 0 0 0 chrUextra 10607930 10608199 -18396457 + TABOR_I LTR Gypsy 1 269 -6067 8 665 3352 192 7 11 chrUextra 10608299 10609057 -18395599 + SAR_DM Satellite Satellite 282 1036 -436 8 665 4825 21 0 2 chrUextra 10609157 10609763 -18394893 - ROO_I LTR Pao -43 8213 7609 8 665 1346 7 0 0 chrUextra 10609763 10609915 -18394741 - ROO_I LTR Pao -1677 6579 6428 8 665 3455 180 6 8 chrUextra 10610015 10610739 -18393917 - SAR_DM Satellite Satellite -559 913 192 8 665 847 100 0 0 chrUextra 10610643 10610773 -18393883 + ARS406_DM Unknown Unknown 1 130 -223 8 665 3226 188 15 21 chrUextra 10610873 10611628 -18393028 - SAR_DM Satellite Satellite -594 750 1 8 665 3561 170 7 21 chrUextra 10611731 10612487 -18392169 + SAR_DM Satellite Satellite 346 1090 -382 8 665 6480 29 3 0 chrUextra 10612589 10613347 -18391309 - R1_DM LINE R1 -420 4936 4177 8 665 6909 1 0 1 chrUextra 10613447 10614205 -18390451 + DOC LINE Jockey 3599 4355 -370 8 665 6718 0 4 0 chrUextra 10614305 10615063 -18389593 + DOC LINE Jockey 1414 2174 -2551 8 665 1028 24 0 8 chrUextra 10615163 10615288 -18389368 + MICROPIA_I LTR Gypsy 4353 4476 0 8 665 4093 6 0 61 chrUextra 10615288 10615795 -18388861 + MICROPIA_LTR LTR Gypsy 1 476 0 8 665 1108 16 0 0 chrUextra 10615795 10615921 -18388735 + MICROPIA_I LTR Gypsy 1 126 -4350 8 665 6433 25 3 0 chrUextra 10616021 10616779 -18387877 + R1_DM LINE R1 2051 2810 -2546 8 666 21 95 0 0 chrUextra 10616945 10617008 -18387648 + AT_rich Low_complexity Low_complexity 1 63 0 8 666 5083 0 0 42 chrUextra 10617020 10617637 -18387019 + LSU-rRNA_Dme rRNA rRNA 1 591 -3309 8 666 678 143 250 7 chrUextra 10617989 10618137 -18386519 - DNAREP1_DM LINE Penelope -388 206 23 8 666 213 39 0 0 chrUextra 10618137 10618163 -18386493 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 8 666 2504 178 21 7 chrUextra 10618595 10619111 -18385545 + SAR_DM Satellite Satellite 1 661 -660 8 666 1055 95 0 0 chrUextra 10619111 10619269 -18385387 - ARS406_DM Unknown Unknown -195 158 1 8 666 2504 178 21 7 chrUextra 10619269 10619347 -18385309 + SAR_DM Satellite Satellite 662 763 -558 8 666 4672 9 0 0 chrUextra 10619453 10619982 -18384674 - Copia2_I LTR Copia -3633 529 1 8 666 1770 0 0 0 chrUextra 10619982 10620180 -18384476 - Copia2_LTR_DM LTR Copia 0 198 1 8 666 240 0 0 0 chrUextra 10620180 10620209 -18384447 - Copia2_I LTR Copia 0 4162 4134 8 666 3140 186 19 26 chrUextra 10620312 10621068 -18383588 + SAR_DM Satellite Satellite 1 750 -216 8 666 1776 13 17 17 chrUextra 10621173 10621405 -18383251 + NTS_DM Other Other 9 240 0 8 666 1813 21 17 17 chrUextra 10621405 10621645 -18383011 + NTS_DM Other Other 1 240 0 8 666 1930 4 17 13 chrUextra 10621645 10621884 -18382772 + NTS_DM Other Other 1 240 0 8 666 369 23 0 0 chrUextra 10621884 10621927 -18382729 + NTS_DM Other Other 1 43 -197 8 666 3569 167 9 19 chrUextra 10622885 10623643 -18381013 - SAR_DM Satellite Satellite -376 1096 346 8 666 3014 108 18 44 chrUextra 10623743 10624292 -18380364 - BATUMI_I LTR Pao -6680 1283 749 8 666 377 151 87 56 chrUextra 10624337 10624498 -18380158 - BATUMI_I LTR Pao -7194 769 604 8 666 6719 3 1 1 chrUextra 10624601 10625359 -18379297 - ROO_I LTR Pao -2525 5731 4974 8 666 4527 2 2 4 chrUextra 10625459 10625968 -18378688 - LSU-rRNA_Dme rRNA rRNA -2327 1573 1066 8 666 2299 0 0 0 chrUextra 10625968 10626217 -18378439 - ROO_LTR LTR Pao 0 428 180 8 666 259 70 0 0 chrUextra 10626317 10626360 -18378296 + PROTOP DNA P 678 720 -3760 8 666 3684 49 47 0 chrUextra 10626409 10626903 -18377753 + PROTOP_A DNA P 589 1105 0 8 666 3431 167 14 14 chrUextra 10627176 10627912 -18376744 - SAR_DM Satellite Satellite -411 1061 326 8 666 242 174 22 0 chrUextra 10628034 10628080 -18376576 - DMCR1A LINE CR1 -3183 1287 1241 8 666 235 191 0 0 chrUextra 10628343 10628390 -18376266 + DNAREP1_DM LINE Penelope 439 485 -109 8 666 611 209 158 13 chrUextra 10628407 10628635 -18376021 - DM412 LTR Gypsy -2420 4477 4217 8 666 360 207 34 11 chrUextra 10628659 10628747 -18375909 - Stalker2_I LTR Gypsy -3348 4054 3965 8 666 970 9 0 0 chrUextra 10628891 10629007 -18375649 - NTS_DM Other Other -87 153 38 8 666 907 9 0 27 chrUextra 10629007 10629119 -18375537 - NTS_DM Other Other -107 133 25 8 666 22 56 0 0 chrUextra 10629145 10629181 -18375475 + AT_rich Low_complexity Low_complexity 1 36 0 8 666 268 119 203 0 chrUextra 10629181 10629240 -18375416 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2581 8 666 262 150 0 0 chrUextra 10629283 10629323 -18375333 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 666 262 150 0 0 chrUextra 10629375 10629415 -18375241 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 666 262 150 0 0 chrUextra 10629467 10629507 -18375149 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 666 22 56 0 0 chrUextra 10629512 10629548 -18375108 + AT_rich Low_complexity Low_complexity 1 36 0 8 666 257 0 0 0 chrUextra 10629620 10629649 -18375007 - LSU-rRNA_Dme rRNA rRNA 0 3900 3872 8 666 2143 85 0 28 chrUextra 10629749 10630074 -18374582 + TART LINE telomeric 894 1209 -13268 8 666 2240 29 42 24 chrUextra 10630074 10630361 -18374295 + PROTOP_A DNA P 1 292 -813 8 666 1271 27 0 7 chrUextra 10630356 10630507 -18374149 + TART LINE telomeric 9784 9933 -4544 8 666 5246 18 0 0 chrUextra 10631465 10632070 -18372586 + FW_DM LINE Jockey 1303 1907 -2785 8 666 1334 13 0 6 chrUextra 10632066 10632223 -18372433 + FW_DM LINE Jockey 2282 2437 -2255 8 666 22 0 0 0 chrUextra 10632323 10632345 -18372311 + AT_rich Low_complexity Low_complexity 1 22 0 8 666 250 278 109 34 chrUextra 10632846 10632965 -18371691 + T412LTR LTR LTR 62 189 -292 8 666 247 314 36 22 chrUextra 10632857 10632994 -18371662 + Gypsy11_LTR LTR Gypsy 100 238 -214 8 666 1616 89 93 0 chrUextra 10633183 10633419 -18371237 + Gypsy12_I LTR Gypsy 1297 1554 -3992 8 666 2205 111 12 12 chrUextra 10633426 10633745 -18370911 + Gypsy12_I LTR Gypsy 1503 1821 -3725 8 666 1346 81 132 0 chrUextra 10633742 10633939 -18370717 + Gypsy12_I LTR Gypsy 4465 4687 -859 8 666 5827 52 25 14 chrUextra 10634039 10634797 -18369859 - DMCR1A LINE CR1 -2249 2221 1456 8 666 746 44 0 0 chrUextra 10634897 10634988 -18369668 - CIRCE LINE Composite -838 5518 5428 8 666 2658 81 67 30 chrUextra 10635068 10635499 -18369157 - CIRCE LINE Composite -929 5427 4981 8 666 2801 6 0 0 chrUextra 10635755 10636066 -18368590 - SSU-rRNA_Dme rRNA rRNA -1684 311 1 8 666 32 0 0 0 chrUextra 10636198 10636230 -18368426 + AT_rich Low_complexity Low_complexity 1 32 0 8 666 4710 69 37 22 chrUextra 10636613 10637371 -18367285 + STALKER4_I LTR Gypsy 830 1598 -4932 8 666 4688 0 0 0 chrUextra 10637471 10637991 -18366665 + FW_DM LINE Jockey 4173 4692 0 8 666 1839 0 10 0 chrUextra 10638329 10638536 -18366120 + R1_DM LINE R1 5148 5356 0 8 666 4999 2 0 2 chrUextra 10638534 10639086 -18365570 + LSU-rRNA_Dme rRNA rRNA 2640 3190 -710 8 666 6398 29 0 1 chrUextra 10639187 10639945 -18364711 - R1_DM LINE R1 -1664 3692 2936 8 666 713 43 0 21 chrUextra 10640045 10640141 -18364515 - NTS_DM Other Other -146 94 1 8 666 1835 17 17 17 chrUextra 10640141 10640381 -18364275 - NTS_DM Other Other 0 240 1 8 666 1813 21 17 17 chrUextra 10640381 10640621 -18364035 - NTS_DM Other Other 0 240 1 8 666 1233 22 22 22 chrUextra 10640621 10640803 -18363853 - NTS_DM Other Other 0 240 59 8 666 2647 160 29 34 chrUextra 10640903 10641651 -18363005 - TAHRE LINE telomeric -3 10460 10012 8 666 651 0 43 32 chrUextra 10641761 10641854 -18362802 + NTS_DM Other Other 147 240 0 8 666 1908 8 17 13 chrUextra 10641854 10642093 -18362563 + NTS_DM Other Other 1 240 0 8 666 1355 6 0 18 chrUextra 10642093 10642258 -18362398 + NTS_DM Other Other 1 162 -78 8 666 514 119 36 0 chrUextra 10642368 10642452 -18362204 + NTS_DM Other Other 4 90 -150 8 666 6664 8 0 0 chrUextra 10642619 10643377 -18361279 - QUASIMODO_I LTR Gypsy -2777 3283 2526 8 666 5050 44 59 1 chrUextra 10643477 10644230 -18360426 - PROTOP DNA P -3727 753 20 8 666 3241 31 3 3 chrUextra 10644650 10645035 -18359621 - DIVER2_LTR LTR Pao 0 385 1 8 666 465 69 0 0 chrUextra 10645035 10645093 -18359563 - DIVER2_I LTR Pao 0 4147 4090 8 666 1663 11 0 0 chrUextra 10645193 10645384 -18359272 + ROVER-I_DM LTR Gypsy 6394 6584 0 8 666 3283 0 0 0 chrUextra 10645384 10645750 -18358906 + ROVER-LTR_DM LTR Gypsy 1 366 -1 8 666 198 0 0 0 chrUextra 10645750 10645772 -18358884 + (TA)n Simple_repeat Simple_repeat 1 22 0 8 666 3335 192 7 9 chrUextra 10646052 10646809 -18357847 + SAR_DM Satellite Satellite 230 984 -488 8 666 4717 88 96 4 chrUextra 10646913 10647667 -18356989 - TART LINE telomeric -13123 1354 532 8 666 6870 1 0 0 chrUextra 10647767 10648525 -18356131 + DMRT1A LINE R1 1626 2383 -2800 8 666 3014 9 3 0 chrUextra 10648625 10648964 -18355692 + LSU-rRNA_Dme rRNA rRNA 2293 2632 -1268 8 666 3743 5 5 0 chrUextra 10648964 10649383 -18355273 + R1_DM LINE R1 1 421 -4935 8 666 3737 24 50 0 chrUextra 10649483 10650241 -18354415 - R1_DM LINE R1 -347 5009 4214 8 666 1037 183 30 13 chrUextra 10650342 10651098 -18353558 - SAR_DM Satellite Satellite -800 768 1 8 666 2439 109 1 45 chrUextra 10651204 10651955 -18352701 - DMSAT6 Satellite Satellite 0 717 1 8 666 2051 4 0 0 chrUextra 10652055 10652304 -18352352 + DM176_I LTR Gypsy 1005 1253 -5167 8 666 4400 10 0 2 chrUextra 10652300 10652812 -18351844 + DM176_I LTR Gypsy 5201 5711 -709 8 666 259 128 0 21 chrUextra 10653120 10653168 -18351488 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 666 259 128 0 21 chrUextra 10653394 10653442 -18351214 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 666 6590 9 1 3 chrUextra 10653769 10654524 -18350132 + STALKER4_I LTR Gypsy 3435 4188 -2342 8 666 3921 26 2 0 chrUextra 10654626 10655089 -18349567 - NINJA_I LTR Pao -1430 4581 4118 8 666 2425 17 31 0 chrUextra 10655089 10655383 -18349273 - NINJA_I LTR Pao -3200 2811 2509 8 666 514 119 36 0 chrUextra 10655713 10655797 -18348859 - NTS_DM Other Other -150 90 4 8 666 1355 6 0 18 chrUextra 10655907 10656072 -18348584 - NTS_DM Other Other -78 162 1 8 666 1234 6 24 18 chrUextra 10656072 10656240 -18348416 - NTS_DM Other Other 0 240 72 8 666 1048 299 110 33 chrUextra 10656341 10657016 -18347640 - ROVER-I_DM LTR Gypsy -5173 1411 341 8 666 5997 26 1 4 chrUextra 10657197 10657954 -18346702 - Invader2_I LTR Gypsy -70 4522 3768 8 666 5263 116 0 0 chrUextra 10658054 10658811 -18345845 + HETA LINE telomeric 2194 2950 -3131 8 666 3265 0 0 63 chrUextra 10658911 10659321 -18345335 - LSU-rRNA_Dme rRNA rRNA -3516 384 1 8 666 21 95 0 0 chrUextra 10659333 10659396 -18345260 + AT_rich Low_complexity Low_complexity 1 63 0 8 666 34 24 0 0 chrUextra 10659609 10659650 -18345006 + AT_rich Low_complexity Low_complexity 1 41 0 8 666 6759 4 8 0 chrUextra 10659768 10660525 -18344131 + Copia2_I LTR Copia 310 1072 -3090 8 666 22 0 0 0 chrUextra 10660625 10660647 -18344009 + AT_rich Low_complexity Low_complexity 1 22 0 8 666 305 240 23 76 chrUextra 10660765 10660896 -18343760 - ROVER-I_DM LTR Gypsy -6460 124 1 8 666 412 113 0 27 chrUextra 10660896 10660960 -18343696 - DMTOM1_LTR LTR Gypsy 0 410 349 8 666 608 148 40 16 chrUextra 10660960 10661084 -18343572 - DMTOM1_LTR LTR Gypsy 0 410 284 8 666 273 191 59 0 chrUextra 10661101 10661169 -18343487 - DM176_LTR LTR Gypsy -141 366 295 8 666 272 140 20 20 chrUextra 10661278 10661329 -18343327 - DM176_LTR LTR Gypsy -238 269 219 8 666 3558 166 14 19 chrUextra 10661482 10662239 -18342417 - SAR_DM Satellite Satellite -365 1107 354 8 666 3846 0 0 0 chrUextra 10662339 10662759 -18341897 + LSU-rRNA_Dme rRNA rRNA 2236 2655 -1245 8 666 2871 24 0 0 chrUextra 10662759 10663096 -18341560 + R1_DM LINE R1 4805 5141 -215 8 666 2586 101 21 5 chrUextra 10663200 10663953 -18340703 - DMSAT6 Satellite Satellite -64 764 1 8 666 701 329 46 23 chrUextra 10664055 10664726 -18339930 + GTWIN_I LTR Gypsy 3254 4467 -2062 8 666 3413 8 0 0 chrUextra 10664910 10665297 -18339359 - BARI_DM DNA Tc1 -1338 390 4 8 666 3256 0 0 0 chrUextra 10665297 10665667 -18338989 - BARI_DM DNA Tc1 -1 1727 1358 8 666 819 0 0 0 chrUextra 10666433 10666524 -18338132 + (TTCTC)n Simple_repeat Simple_repeat 2 92 0 8 666 5972 24 14 11 chrUextra 10666624 10667381 -18337275 + PROTOP_A DNA P 70 829 -276 8 666 4583 4 9 0 chrUextra 10667481 10668019 -18336637 + QUASIMODO_LTR LTR Gypsy 116 658 0 8 666 1809 14 0 5 chrUextra 10668019 10668238 -18336418 + QUASIMODO_I LTR Gypsy 1 218 -5842 8 666 746 124 94 6 chrUextra 10668338 10668508 -18336148 + DNAREP1_DM LINE Penelope 113 297 -297 8 666 4931 74 3 16 chrUextra 10669195 10669952 -18334704 + BATUMI_I LTR Pao 2014 2793 -5121 8 666 3022 161 55 25 chrUextra 10670052 10670785 -18333871 - TART LINE telomeric -4779 9698 8944 8 666 218 284 0 43 chrUextra 10671058 10671150 -18333506 + A-rich Low_complexity Low_complexity 1 88 0 8 666 22 0 0 0 chrUextra 10671192 10671214 -18333442 + AT_rich Low_complexity Low_complexity 1 22 0 8 666 26 30 0 0 chrUextra 10671256 10671289 -18333367 + AT_rich Low_complexity Low_complexity 1 33 0 8 666 28 48 0 0 chrUextra 10671973 10672015 -18332641 + AT_rich Low_complexity Low_complexity 1 42 0 8 666 488 119 36 0 chrUextra 10672289 10672373 -18332283 - NTS_DM Other Other -150 90 4 8 666 6430 3 1 4 chrUextra 10672623 10673380 -18331276 + LSU-rRNA_Dme rRNA rRNA 835 1589 -2311 8 666 4972 27 1 8 chrUextra 10673480 10674150 -18330506 + IDEFIX_I LTR Gypsy 4963 5628 0 8 666 575 35 23 0 chrUextra 10674150 10674237 -18330419 + IDEFIX_LTR LTR Gypsy 1 89 -505 8 666 2113 0 7 3 chrUextra 10674337 10674625 -18330031 + HMSBEAGLE_I LTR Gypsy 499 787 -5742 8 666 764 38 45 15 chrUextra 10674641 10674775 -18329881 + (TTA)n Simple_repeat Simple_repeat 3 140 0 8 666 2608 9 0 0 chrUextra 10674775 10675094 -18329562 + HMSBEAGLE_I LTR Gypsy 976 1294 -5235 8 666 1622 288 45 12 chrUextra 10675210 10675937 -18328719 + MICROPIA_I LTR Gypsy 2535 3285 -1191 8 666 5617 55 7 11 chrUextra 10676051 10676808 -18327848 + R1_DM LINE R1 988 1741 -3615 8 666 2802 180 28 28 chrUextra 10676908 10677658 -18326998 + SAR_DM Satellite Satellite 439 1188 -284 8 666 5441 34 1 0 chrUextra 10677765 10678444 -18326212 + R1_DM LINE R1 2463 3142 -2214 8 666 622 13 0 0 chrUextra 10678447 10678522 -18326134 + R1_DM LINE R1 3275 3349 -2007 8 666 2660 199 27 46 chrUextra 10678623 10679365 -18325291 + TAHRE LINE telomeric 7222 7949 -2514 8 666 1207 84 0 0 chrUextra 10679500 10679703 -18324953 - Stalker2_LTR LTR Gypsy -152 272 52 8 666 249 29 0 0 chrUextra 10679726 10679761 -18324895 - STALKER4_I LTR Gypsy -5 6525 6491 8 666 32 0 0 0 chrUextra 10679761 10679793 -18324863 + AT_rich Low_complexity Low_complexity 1 32 0 8 666 583 282 3 10 chrUextra 10679939 10680236 -18324420 - Gypsy11_I LTR Gypsy -137 3387 3093 8 666 1281 48 0 0 chrUextra 10680562 10680728 -18323928 + G2_DM LINE Jockey 2680 2845 -257 8 666 1361 217 34 17 chrUextra 10680732 10681084 -18323572 - G_DM LINE Jockey -2998 1348 991 8 666 2037 26 4 14 chrUextra 10681193 10681469 -18323187 + FW_DM LINE Jockey 4420 4692 0 8 666 4155 10 2 0 chrUextra 10681439 10681950 -18322706 + NOMAD_I LTR Gypsy 5661 6172 -400 8 666 6071 25 1 4 chrUextra 10682050 10682807 -18321849 + R1_DM LINE R1 3163 3917 -1439 8 666 288 319 32 40 chrUextra 10683196 10683594 -18321062 + BLASTOPIA_I LTR Gypsy 2180 2586 -2302 8 666 5186 12 0 1 chrUextra 10683764 10684424 -18320232 + IDEFIX_I LTR Gypsy 4970 5628 0 8 666 787 10 0 0 chrUextra 10684424 10684521 -18320135 + IDEFIX_LTR LTR Gypsy 1 97 -497 8 666 421 227 77 14 chrUextra 10684657 10684800 -18319856 + HETRP_DM Satellite Satellite 1518 1669 -203 8 666 599 207 7 14 chrUextra 10684948 10685090 -18319566 + HETRP_DM Satellite Satellite 1529 1669 -203 8 666 276 30 0 0 chrUextra 10685221 10685254 -18319402 + (GA)n Simple_repeat Simple_repeat 2 34 0 8 666 427 237 17 9 chrUextra 10685254 10685369 -18319287 + HETRP_DM Satellite Satellite 1549 1664 -208 8 666 946 55 11 18 chrUextra 10685490 10686235 -18318421 + RSP Satellite Satellite 1 739 0 8 666 225 0 0 0 chrUextra 10686335 10686360 -18318296 + (TTGTG)n Simple_repeat Simple_repeat 1 25 0 8 666 6207 8 7 0 chrUextra 10686360 10687092 -18317564 + DMRT1B LINE R1 3536 4272 -911 8 666 6319 3 0 0 chrUextra 10687192 10687949 -18316707 + STALKER4_I LTR Gypsy 2975 3731 -2799 8 666 2032 186 9 5 chrUextra 10688049 10688802 -18315854 + SAR_DM Satellite Satellite 1 755 -677 8 666 1753 187 4 13 chrUextra 10688910 10689346 -18315310 - STALKER4_I LTR Gypsy -6676 726 235 8 666 25 0 0 0 chrUextra 10689370 10689395 -18315261 + AT_rich Low_complexity Low_complexity 1 25 0 8 666 913 77 15 0 chrUextra 10689533 10689663 -18314993 - STALKER4_LTR LTR Gypsy -23 379 248 8 666 2325 18 0 0 chrUextra 10689763 10690044 -18314612 + R1_DM LINE R1 4002 4282 -1074 8 666 3729 29 2 0 chrUextra 10690064 10690520 -18314136 + R1_DM LINE R1 4407 4863 -493 8 666 6224 25 14 0 chrUextra 10690620 10691377 -18313279 - DMCR1A LINE CR1 -2901 1569 802 8 666 3401 140 70 3 chrUextra 10691479 10692226 -18312430 - TART_B1 LINE telomeric -8152 2502 1706 8 666 6121 11 0 9 chrUextra 10692334 10693091 -18311565 + MDG1_I LTR Gypsy 116 865 -5731 8 666 4155 0 4 4 chrUextra 10693191 10693682 -18310974 + LSU-rRNA_Dme rRNA rRNA 1298 1788 -2112 8 666 1906 9 0 0 chrUextra 10693726 10693948 -18310708 + LSU-rRNA_Dme rRNA rRNA 1788 2009 -1891 8 666 5184 14 3 42 chrUextra 10694048 10694538 -18310118 - DM176_I LTR Gypsy -5414 1006 537 8 666 208 28 26 53 chrUextra 10694538 10694576 -18310080 + (TTA)n Simple_repeat Simple_repeat 3 39 0 8 666 5184 14 3 42 chrUextra 10694576 10694804 -18309852 - DM176_I LTR Gypsy -5884 536 316 8 666 660 115 9 0 chrUextra 10694908 10695021 -18309635 - SAR_DM Satellite Satellite -820 652 539 8 666 2812 216 51 25 chrUextra 10695032 10696518 -18308138 - SAR_DM Satellite Satellite -683 1524 1 8 666 231 61 0 0 chrUextra 10696629 10696662 -18307994 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 666 655 186 7 14 chrUextra 10696793 10696935 -18307721 - HETRP_DM Satellite Satellite -203 1669 1529 8 666 512 200 8 16 chrUextra 10697070 10697192 -18307464 - HETRP_DM Satellite Satellite -203 1669 1549 8 666 210 37 0 0 chrUextra 10697192 10697219 -18307437 + (TC)n Simple_repeat Simple_repeat 2 28 0 8 666 3043 181 8 10 chrUextra 10697476 10698185 -18306471 - SAR_DM Satellite Satellite -570 902 195 8 666 605 135 0 0 chrUextra 10698092 10698203 -18306453 + ARS406_DM Unknown Unknown 1 111 -242 8 666 262 0 0 0 chrUextra 10698203 10698233 -18306423 + Gypsy6_LTR LTR Gypsy 1 30 -377 8 666 3105 170 19 28 chrUextra 10698333 10699090 -18305566 - SAR_DM Satellite Satellite -316 1156 407 8 666 6480 0 0 3 chrUextra 10699190 10699947 -18304709 + R1_DM LINE R1 1565 2319 -3037 8 666 6214 11 1 4 chrUextra 10700048 10700803 -18303853 - IDEFIX_I LTR Gypsy -2715 2913 2161 8 666 4505 15 2 0 chrUextra 10700904 10701442 -18303214 + R1_DM LINE R1 4818 5356 0 8 666 1326 71 5 0 chrUextra 10701475 10701659 -18302997 + R1_DM LINE R1 1 185 -5171 8 666 2208 15 0 0 chrUextra 10702618 10702877 -18301779 - MICROPIA_I LTR Gypsy -4217 259 1 8 666 3030 11 2 75 chrUextra 10702877 10703291 -18301365 - MICROPIA_LTR LTR Gypsy 0 476 93 8 666 633 0 0 12 chrUextra 10703294 10703375 -18301281 + ACCORD2_I LTR Gypsy 1081 1160 -6052 8 666 650 97 71 7 chrUextra 10703488 10703643 -18301013 + PROTOP DNA P 542 707 -3773 8 666 402 108 0 0 chrUextra 10703644 10703709 -18300947 + PROTOP DNA P 1009 1073 -3407 8 666 2730 94 113 6 chrUextra 10703705 10704174 -18300482 + PROTOP DNA P 3960 4478 -2 8 666 344 57 38 0 chrUextra 10704176 10704229 -18300427 - DOC LINE Jockey -1054 3671 3617 8 666 2147 4 0 0 chrUextra 10704332 10704582 -18300074 + BLASTOPIA_I LTR Gypsy 4232 4481 0 8 666 2034 15 22 8 chrUextra 10704582 10704849 -18299807 + BLASTOPIA_LTR LTR Gypsy 1 271 -4 8 666 1161 118 0 0 chrUextra 10704849 10705027 -18299629 + (CATA)n Simple_repeat Simple_repeat 3 180 0 8 666 362 115 16 0 chrUextra 10705027 10705088 -18299568 + (TA)n Simple_repeat Simple_repeat 1 62 0 8 666 3553 11 62 0 chrUextra 10705189 10705946 -18298710 + STALKER4_I LTR Gypsy 3142 3945 -2585 8 666 1273 19 0 18 chrUextra 10706083 10706248 -18298408 - NTS_DM Other Other -78 162 1 8 666 1674 38 17 17 chrUextra 10706248 10706488 -18298168 - NTS_DM Other Other 0 240 1 8 666 1488 24 18 32 chrUextra 10706488 10706707 -18297949 - NTS_DM Other Other 0 240 25 8 666 5833 45 8 0 chrUextra 10706903 10707659 -18296997 + R1_DM LINE R1 2710 3471 -1885 8 666 6595 3 0 0 chrUextra 10707760 10708517 -18296139 + BEL_I LTR Pao 3135 3891 -1513 8 666 28 48 0 0 chrUextra 10708659 10708701 -18295955 + AT_rich Low_complexity Low_complexity 1 42 0 8 666 476 131 36 0 chrUextra 10708974 10709058 -18295598 - NTS_DM Other Other -150 90 4 8 666 1301 6 0 18 chrUextra 10709168 10709333 -18295323 - NTS_DM Other Other -78 162 1 8 666 262 358 0 0 chrUextra 10709667 10709878 -18294778 - Invader3_I LTR Gypsy -695 4193 4059 8 666 3012 178 12 9 chrUextra 10710331 10711088 -18293568 - SAR_DM Satellite Satellite -514 758 1 8 666 2965 177 9 9 chrUextra 10712045 10712802 -18291854 - SAR_DM Satellite Satellite -264 1208 195 8 666 4883 105 0 0 chrUextra 10712936 10713659 -18290997 + DMRT1B LINE R1 3134 3856 -1327 8 666 1388 20 20 20 chrUextra 10713759 10713959 -18290697 + NTS_DM Other Other 41 240 0 8 666 1850 4 17 13 chrUextra 10713959 10714198 -18290458 + NTS_DM Other Other 1 240 0 8 666 1831 0 17 17 chrUextra 10714198 10714438 -18290218 + NTS_DM Other Other 1 240 0 8 666 688 0 0 0 chrUextra 10714438 10714516 -18290140 + NTS_DM Other Other 1 78 -162 8 666 3965 0 2 0 chrUextra 10714921 10715373 -18289283 - SSU-rRNA_Dme rRNA rRNA 0 1995 1543 8 666 2747 3 3 0 chrUextra 10715473 10715790 -18288866 + QUASIMODO_I LTR Gypsy 443 760 -5300 8 666 3680 2 0 0 chrUextra 10715790 10716230 -18288426 + QUASIMODO_I LTR Gypsy 4580 5019 -1041 8 666 6576 1 0 1 chrUextra 10716332 10717087 -18287569 + LSU-rRNA_Dme rRNA rRNA 2676 3429 -471 8 666 21 89 0 0 chrUextra 10717778 10717834 -18286822 + AT_rich Low_complexity Low_complexity 1 56 0 8 666 23 68 0 0 chrUextra 10717872 10717916 -18286740 + AT_rich Low_complexity Low_complexity 1 44 0 8 666 5836 48 0 8 chrUextra 10718044 10718801 -18285855 - Jockey2 LINE Jockey -129 3299 2549 8 666 6468 4 0 0 chrUextra 10718901 10719658 -18284998 - R1_DM LINE R1 -1763 3593 2837 8 666 2037 289 11 6 chrUextra 10719776 10720486 -18284170 - ROVER-I_DM LTR Gypsy -4933 1651 938 8 666 252 0 0 0 chrUextra 10721110 10721139 -18283517 - SSU-rRNA_Dme rRNA rRNA 0 1995 1967 8 666 1884 4 9 0 chrUextra 10721146 10721372 -18283284 - SSU-rRNA_Dme rRNA rRNA -347 1648 1421 8 666 6057 5 1 0 chrUextra 10721472 10722229 -18282427 + DM297_I LTR Gypsy 5158 5915 -252 8 666 1203 7 0 0 chrUextra 10722333 10722469 -18282187 + (TTTTG)n Simple_repeat Simple_repeat 2 137 0 8 666 262 111 200 40 chrUextra 10723189 10723390 -18281266 + (CTAAA)n Simple_repeat Simple_repeat 1 233 0 8 666 478 276 0 0 chrUextra 10723394 10723749 -18280907 + (ACTG)n Simple_repeat Simple_repeat 1 355 0 8 666 3046 182 6 10 chrUextra 10724051 10724763 -18279893 - SAR_DM Satellite Satellite -569 903 195 8 666 795 108 0 0 chrUextra 10724670 10724800 -18279856 + ARS406_DM Unknown Unknown 1 130 -223 8 666 1560 11 0 0 chrUextra 10725479 10725657 -18278999 + (TTCTC)n Simple_repeat Simple_repeat 2 179 0 8 666 506 225 70 0 chrUextra 10725862 10726004 -18278652 - HETRP_DM Satellite Satellite -203 1669 1518 8 666 373 194 87 10 chrUextra 10726138 10726242 -18278414 + DNAREP1_DM LINE Penelope 67 178 -416 8 666 1543 41 0 5 chrUextra 10727174 10727371 -18277285 + PROTOP_A DNA P 1 196 -909 8 666 6521 3 0 0 chrUextra 10727471 10728228 -18276428 - R2_DM LINE R2 -2366 1241 485 8 666 1690 113 13 37 chrUextra 10728328 10728650 -18276006 - QUASIMODO_LTR LTR Gypsy -118 540 91 8 666 229 220 0 0 chrUextra 10728805 10728864 -18275792 - TIRANT_I LTR Gypsy -660 7032 6974 8 666 2779 201 16 24 chrUextra 10729188 10729942 -18274714 - SAR_DM Satellite Satellite -593 747 1 8 666 6035 1 1 0 chrUextra 10730103 10730795 -18273861 - SSU-rRNA_Dme rRNA rRNA 0 1995 1303 8 666 6404 11 3 0 chrUextra 10730899 10731656 -18273000 + DOC2_DM LINE Jockey 1960 2718 -2075 8 666 2464 96 29 6 chrUextra 10731782 10732513 -18272143 - DMSAT6 Satellite Satellite -3 747 1 8 666 2247 8 0 0 chrUextra 10732613 10732873 -18271783 + DMRT1B LINE R1 4924 5183 0 8 666 484 83 135 0 chrUextra 10732878 10732974 -18271682 + TART_B1 LINE telomeric 2231 2339 -8315 8 666 3308 28 0 0 chrUextra 10732972 10733370 -18271286 + DMRT1A LINE R1 3602 3999 -1184 8 666 2569 98 7 31 chrUextra 10733470 10733904 -18270752 + QUASIMODO_LTR LTR Gypsy 98 656 -2 8 666 6405 5 0 4 chrUextra 10735184 10735941 -18268715 + G2_DM LINE Jockey 960 1713 -1389 8 666 712 114 7 18 chrUextra 10736053 10736338 -18268318 + RSP Satellite Satellite 1 281 0 8 666 742 124 11 18 chrUextra 10736364 10736798 -18267858 + RSP Satellite Satellite 1 431 0 8 666 2856 191 15 21 chrUextra 10736898 10737652 -18267004 + SAR_DM Satellite Satellite 462 1210 -262 8 666 3414 26 7 7 chrUextra 10737755 10738187 -18266469 + DMRT1A LINE R1 4740 5171 -12 8 666 509 68 0 0 chrUextra 10738190 10738263 -18266393 + CIRCE LINE Composite 4291 4363 -1993 8 666 887 64 8 0 chrUextra 10738261 10738386 -18266270 + CIRCE LINE Composite 4855 4980 -1376 8 666 6433 12 8 0 chrUextra 10738612 10739368 -18265288 + Gypsy4_I LTR Gypsy 624 1385 -4903 8 666 327 85 0 0 chrUextra 10739676 10739723 -18264933 + (TC)n Simple_repeat Simple_repeat 1 47 0 8 666 4872 21 52 0 chrUextra 10740324 10741077 -18263579 - DMRT1B LINE R1 -2393 2790 1999 8 666 4049 2 0 0 chrUextra 10741180 10741647 -18263009 + LSU-rRNA_Dme rRNA rRNA 2113 2579 -1321 8 666 2513 0 0 3 chrUextra 10741647 10741936 -18262720 + R2_DM LINE R2 1 288 -3319 8 666 316 200 0 23 chrUextra 10742038 10742125 -18262531 + XDMR_DM Unknown Unknown 267 351 -9 8 666 2998 172 21 24 chrUextra 10742048 10742791 -18261865 - SAR_DM Satellite Satellite -354 1118 378 8 666 2905 186 10 11 chrUextra 10743755 10744468 -18260188 - SAR_DM Satellite Satellite -569 903 192 8 666 776 121 0 0 chrUextra 10744372 10744504 -18260152 + ARS406_DM Unknown Unknown 1 132 -221 8 666 1105 92 6 33 chrUextra 10744604 10744784 -18259872 - TART LINE telomeric -10619 3858 3684 8 666 3100 101 22 60 chrUextra 10744780 10745360 -18259296 - TART LINE telomeric -11115 3362 2805 8 666 2286 102 17 47 chrUextra 10745461 10746216 -18258440 - DMSAT6 Satellite Satellite -64 732 1 8 666 6056 7 11 13 chrUextra 10746316 10747072 -18257584 + MDG1_I LTR Gypsy 305 1058 -5538 8 666 730 0 0 0 chrUextra 10747172 10747260 -18257396 + ROO_LTR LTR Pao 341 428 0 8 666 3771 4 203 24 chrUextra 10747260 10747803 -18256853 + ROO_I LTR Pao 1 640 -7616 8 666 552 130 0 0 chrUextra 10747803 10747895 -18256761 + (CAG)n Simple_repeat Simple_repeat 1 92 0 8 83 270 0 0 0 chrUextra 10747896 10747928 -18256728 + ROO_I LTR Pao 734 765 -7491 8 667 2726 180 31 28 chrUextra 10748029 10748784 -18255872 + SAR_DM Satellite Satellite 1 757 -261 8 667 1941 0 0 4 chrUextra 10748884 10749116 -18255540 - Copia_I LTR Copia -4362 231 1 8 667 2297 0 0 0 chrUextra 10749116 10749392 -18255264 - Copia_LTR LTR Copia 0 276 1 8 667 3839 2 0 0 chrUextra 10749743 10750186 -18254470 - LSU-rRNA_Dme rRNA rRNA -818 3082 2640 8 667 2643 10 3 0 chrUextra 10750184 10750496 -18254160 - R1_DM LINE R1 0 5356 5044 8 667 2645 209 27 19 chrUextra 10750603 10751348 -18253308 - SAR_DM Satellite Satellite -580 751 1 8 667 1449 0 0 0 chrUextra 10751457 10751618 -18253038 + (CTATT)n Simple_repeat Simple_repeat 3 163 0 8 667 2019 0 0 0 chrUextra 10752308 10752541 -18252115 + R2_DM LINE R2 3375 3607 0 8 667 556 30 0 0 chrUextra 10752545 10752611 -18252045 + LSU-rRNA_Dme rRNA rRNA 2578 2643 -1257 8 667 3867 2 0 0 chrUextra 10752612 10753064 -18251592 + R1_DM LINE R1 2555 3006 -2350 8 667 6419 7 15 0 chrUextra 10753164 10753920 -18250736 - Gypsy4_I LTR Gypsy -2596 3692 2926 8 667 3037 174 34 10 chrUextra 10754040 10754772 -18249884 + SAR_DM Satellite Satellite 326 1075 -397 8 667 6051 29 11 0 chrUextra 10754876 10755632 -18249024 + R1_DM LINE R1 2488 3251 -2105 8 667 3497 123 7 10 chrUextra 10755732 10756488 -18248168 - BATUMI_I LTR Pao -2904 5010 4182 8 667 4242 46 54 0 chrUextra 10756588 10757344 -18247312 + DMCR1A LINE CR1 2312 3108 -1362 8 667 6380 17 0 0 chrUextra 10757444 10758200 -18246456 + FW_DM LINE Jockey 3284 4039 -653 8 667 903 90 11 21 chrUextra 10758308 10759056 -18245600 + RSP Satellite Satellite 1 740 0 8 667 2197 0 0 8 chrUextra 10759156 10759419 -18245237 - Copia_I LTR Copia -4332 261 1 8 667 2297 0 0 0 chrUextra 10759419 10759695 -18244961 - Copia_LTR LTR Copia 0 276 1 8 667 414 49 98 0 chrUextra 10759695 10759777 -18244879 + STALKER4_I LTR Gypsy 6204 6293 -237 8 667 826 28 0 0 chrUextra 10759806 10759912 -18244744 + STALKER4_LTR LTR Gypsy 1 106 -296 8 667 622 26 0 0 chrUextra 10760012 10760090 -18244566 - TLD1 Unknown Unknown -74 122 45 8 667 2756 199 15 25 chrUextra 10760020 10760741 -18243915 - Stalker2_I LTR Gypsy -1626 5776 5063 8 667 5037 87 9 16 chrUextra 10760868 10761624 -18243032 + Gypsy12_I LTR Gypsy 1311 2061 -3485 8 667 4950 3 70 0 chrUextra 10761724 10762480 -18242176 + R1_DM LINE R1 2415 3223 -2133 8 667 2995 182 17 23 chrUextra 10762580 10763332 -18241324 + SAR_DM Satellite Satellite 425 1172 -300 8 667 3933 2 0 2 chrUextra 10764292 10764747 -18239909 - LSU-rRNA_Dme rRNA rRNA -1659 2241 1788 8 667 2099 0 8 4 chrUextra 10764791 10765048 -18239608 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1531 8 667 3222 87 129 25 chrUextra 10765148 10765903 -18238753 - Gypsy12_I LTR Gypsy -4580 966 134 8 667 5359 7 42 0 chrUextra 10766004 10766760 -18237896 + DOC2_DM LINE Jockey 2450 3237 -1556 8 667 1928 4 0 4 chrUextra 10766860 10767097 -18237559 + Copia_LTR LTR Copia 41 276 0 8 667 232 0 0 0 chrUextra 10767097 10767131 -18237525 + Copia_LTR LTR Copia 243 276 0 8 667 4190 0 0 2 chrUextra 10767131 10767616 -18237040 + Copia_I LTR Copia 1 484 -4109 8 667 1613 180 12 18 chrUextra 10768575 10769318 -18235338 - SAR_DM Satellite Satellite -595 738 1 8 667 1129 0 7 0 chrUextra 10769430 10769571 -18235085 + Copia_LTR LTR Copia 135 276 0 8 667 5309 2 0 2 chrUextra 10769571 10770184 -18234472 - DOC LINE Jockey -869 3856 3245 8 667 259 333 102 14 chrUextra 10771534 10771829 -18232827 + BLASTOPIA_I LTR Gypsy 4160 4480 -1 8 667 3184 181 8 8 chrUextra 10772017 10772752 -18231904 - SAR_DM Satellite Satellite -396 1076 342 8 667 870 9 0 27 chrUextra 10772885 10772997 -18231659 + NTS_DM Other Other 25 133 -107 8 667 1252 18 0 6 chrUextra 10772997 10773162 -18231494 + NTS_DM Other Other 38 201 -39 8 667 21 57 0 0 chrUextra 10773162 10773197 -18231459 + AT_rich Low_complexity Low_complexity 1 35 0 8 667 832 9 9 27 chrUextra 10773223 10773334 -18231322 + NTS_DM Other Other 25 133 -107 8 667 817 0 0 0 chrUextra 10773334 10773430 -18231226 + NTS_DM Other Other 38 133 -107 8 667 1260 29 17 6 chrUextra 10773430 10773606 -18231050 + NTS_DM Other Other 38 215 -25 8 667 3603 159 74 5 chrUextra 10773710 10774463 -18230193 + IDEFIX_I LTR Gypsy 2866 3670 -1958 8 667 2117 0 3 86 chrUextra 10774564 10774856 -18229800 - LSU-rRNA_Dme rRNA rRNA -3632 268 1 8 667 21 95 0 0 chrUextra 10774868 10774931 -18229725 + AT_rich Low_complexity Low_complexity 1 63 0 8 667 34 24 0 0 chrUextra 10775144 10775185 -18229471 + AT_rich Low_complexity Low_complexity 1 41 0 8 667 3314 181 8 5 chrUextra 10775421 10776170 -18228486 - SAR_DM Satellite Satellite -396 1076 326 8 667 6316 17 1 0 chrUextra 10776276 10777032 -18227624 + R1_DM LINE R1 1913 2669 -2687 8 667 25 0 0 0 chrUextra 10777227 10777252 -18227404 + AT_rich Low_complexity Low_complexity 1 25 0 8 667 2122 152 52 23 chrUextra 10777276 10777875 -18226781 + Stalker2_I LTR Gypsy 291 954 -5576 8 667 261 149 11 75 chrUextra 10777988 10778082 -18226574 - DNAREP1_DM LINE Penelope -308 286 199 8 667 683 126 112 13 chrUextra 10778080 10778270 -18226386 - DNAREP1_DM LINE Penelope -272 322 90 8 667 1127 94 0 28 chrUextra 10778246 10778422 -18226234 - DNAREP1_DM LINE Penelope -420 174 4 8 667 26 0 0 0 chrUextra 10778487 10778513 -18226143 + AT_rich Low_complexity Low_complexity 1 26 0 8 667 680 233 29 24 chrUextra 10778537 10778744 -18225912 - HOBO DNA hAT 0 3016 2809 8 667 5973 33 0 0 chrUextra 10778844 10779600 -18225056 + MDG1_I LTR Gypsy 3006 3761 -2835 8 667 31 26 0 0 chrUextra 10779738 10779776 -18224880 + AT_rich Low_complexity Low_complexity 1 38 0 8 667 27 29 0 0 chrUextra 10780800 10780834 -18223822 + AT_rich Low_complexity Low_complexity 1 34 0 8 667 250 33 0 0 chrUextra 10781074 10781104 -18223552 + Baggins1 LINE LOA 4727 4756 -697 8 667 693 103 241 0 chrUextra 10781112 10781257 -18223399 + FB4_DM DNA Tc1 3908 4087 -2 8 667 5400 33 56 0 chrUextra 10781412 10782168 -18222488 - R1_DM LINE R1 -1816 3540 2743 8 667 23 0 0 0 chrUextra 10782613 10782636 -18222020 + AT_rich Low_complexity Low_complexity 1 23 0 8 667 599 268 0 0 chrUextra 10783132 10783315 -18221341 - ROVER-I_DM LTR Gypsy -5345 1239 1057 8 667 24 0 0 0 chrUextra 10783430 10783454 -18221202 + AT_rich Low_complexity Low_complexity 1 24 0 8 667 262 191 43 43 chrUextra 10783527 10783642 -18221014 + T-rich Low_complexity Low_complexity 3 117 0 8 667 5309 3 2 2 chrUextra 10783980 10784596 -18220060 - R2_DM LINE R2 -2989 618 3 8 667 1240 0 0 0 chrUextra 10784595 10784736 -18219920 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2441 8 667 2191 190 28 14 chrUextra 10784836 10785385 -18219271 - SAR_DM Satellite Satellite -1093 556 1 8 667 240 23 67 22 chrUextra 10785388 10785433 -18219223 + (TTTAA)n Simple_repeat Simple_repeat 3 49 0 8 667 554 179 65 26 chrUextra 10785433 10785588 -18219068 - SAR_DM Satellite Satellite -430 1042 882 8 667 660 93 68 0 chrUextra 10785474 10785592 -18219064 + ARS406_DM Unknown Unknown 2 127 -226 8 667 3970 106 103 29 chrUextra 10785692 10786448 -18218208 + BATUMI_I LTR Pao 824 1635 -6328 8 667 6170 13 19 9 chrUextra 10786548 10787304 -18217352 - CIRCE LINE Composite -2227 4129 3367 8 667 5057 33 80 3 chrUextra 10787404 10788095 -18216561 - ROOA_I LTR Pao -734 6115 5372 8 667 5883 19 5 4 chrUextra 10789116 10789872 -18214784 - PROTOP_A DNA P -265 840 84 8 667 4063 59 4 4 chrUextra 10789972 10790514 -18214142 - R1_DM LINE R1 -4814 542 1 8 667 1408 34 0 11 chrUextra 10790547 10790728 -18213928 - R1_DM LINE R1 0 5356 5178 8 667 2423 7 0 79 chrUextra 10790828 10791158 -18213498 - LSU-rRNA_Dme rRNA rRNA -3596 304 1 8 667 21 95 0 0 chrUextra 10791170 10791233 -18213423 + AT_rich Low_complexity Low_complexity 1 63 0 8 667 34 24 0 0 chrUextra 10791446 10791487 -18213169 + AT_rich Low_complexity Low_complexity 1 41 0 8 667 5630 49 8 0 chrUextra 10791684 10792437 -18212219 + IDEFIX_I LTR Gypsy 707 1465 -4163 8 667 2932 182 21 27 chrUextra 10792541 10793293 -18211363 + SAR_DM Satellite Satellite 425 1172 -300 8 667 5839 24 26 3 chrUextra 10794252 10795008 -18209648 + PROTOP_A DNA P 106 879 -226 8 667 6505 4 0 0 chrUextra 10795108 10795864 -18208792 + DMRT1B LINE R1 1595 2350 -2833 8 667 3462 241 42 17 chrUextra 10795966 10797576 -18207080 + SAR_DM Satellite Satellite 1 1649 -219 8 667 6111 9 3 5 chrUextra 10797676 10798430 -18206226 + ROO_I LTR Pao 3636 4387 -3869 8 667 28 48 0 0 chrUextra 10798739 10798781 -18205875 + AT_rich Low_complexity Low_complexity 1 42 0 8 667 2988 175 16 19 chrUextra 10799389 10800130 -18204526 - SAR_DM Satellite Satellite -539 933 195 8 667 507 62 41 10 chrUextra 10800045 10800142 -18204514 + ARS406_DM Unknown Unknown 6 105 -248 8 667 1413 44 0 0 chrUextra 10800485 10800763 -18203893 + (CTATT)n Simple_repeat Simple_repeat 1 278 0 8 667 3066 176 14 19 chrUextra 10801956 10802696 -18201960 + SAR_DM Satellite Satellite 383 1118 -354 8 667 324 188 35 12 chrUextra 10802626 10802712 -18201944 - XDMR_DM Unknown Unknown -12 348 261 8 667 3358 170 12 8 chrUextra 10802820 10803568 -18201088 + SAR_DM Satellite Satellite 287 1037 -435 8 667 441 77 0 0 chrUextra 10803668 10803733 -18200923 + ARS406_DM Unknown Unknown 125 189 -164 8 667 2823 203 17 22 chrUextra 10803686 10804424 -18200232 - SAR_DM Satellite Satellite -610 734 1 8 667 226 252 33 26 chrUextra 10804525 10804676 -18199980 + (CTAAA)n Simple_repeat Simple_repeat 3 154 0 8 667 210 259 33 26 chrUextra 10804704 10804855 -18199801 + (CTAAA)n Simple_repeat Simple_repeat 3 154 0 8 667 210 259 33 26 chrUextra 10804883 10805034 -18199622 + (CTAAA)n Simple_repeat Simple_repeat 3 154 0 8 667 203 202 19 66 chrUextra 10805062 10805168 -18199488 + (CTAAA)n Simple_repeat Simple_repeat 3 103 0 8 667 284 139 0 0 chrUextra 10806239 10806282 -18198374 + Gypsy12_I LTR Gypsy 1779 1821 -3725 8 667 3856 82 147 11 chrUextra 10806279 10806992 -18197664 + Gypsy12_I LTR Gypsy 4465 5274 -272 8 667 3233 181 8 8 chrUextra 10807102 10807848 -18196808 + SAR_DM Satellite Satellite 195 940 -532 8 667 515 0 0 0 chrUextra 10807948 10808008 -18196648 - Copia2_I LTR Copia -3951 211 152 8 667 323 291 39 8 chrUextra 10808057 10808185 -18196471 - Copia2_I LTR Copia -3464 698 567 8 667 6622 3 0 0 chrUextra 10808804 10809560 -18195096 - SSU-rRNA_Dme rRNA rRNA -1085 910 155 8 667 4117 0 6 4 chrUextra 10809660 10810150 -18194506 + LSU-rRNA_Dme rRNA rRNA 1298 1788 -2112 8 667 1923 0 5 0 chrUextra 10810194 10810416 -18194240 + LSU-rRNA_Dme rRNA rRNA 1788 2010 -1890 8 667 4293 23 6 0 chrUextra 10811372 10811896 -18192760 + PROTOP DNA P 1076 1602 -2878 8 667 1748 44 8 12 chrUextra 10811876 10812128 -18192528 + PROTOP DNA P 3589 3839 -641 8 667 2112 0 0 0 chrUextra 10812231 10812483 -18192173 - TABOR_I LTR Gypsy -5073 1263 1012 8 667 1945 106 59 64 chrUextra 10812483 10812887 -18191769 + Gypsy6_LTR LTR Gypsy 1 402 -5 8 667 213 39 0 0 chrUextra 10813785 10813811 -18190845 + (GA)n Simple_repeat Simple_repeat 1 26 0 8 667 405 0 0 0 chrUextra 10813940 10813985 -18190671 + (TTGTG)n Simple_repeat Simple_repeat 1 45 0 8 667 5868 11 27 0 chrUextra 10813985 10814696 -18189960 + DMRT1B LINE R1 3536 4265 -918 8 667 5560 20 34 19 chrUextra 10814796 10815552 -18189104 - ROO_I LTR Pao -7163 1093 326 8 667 4129 30 111 9 chrUextra 10815652 10816408 -18188248 - Gypsy12_LTR LTR Gypsy -219 2117 1285 8 667 26 101 0 0 chrUextra 10817173 10817262 -18187394 + AT_rich Low_complexity Low_complexity 1 89 0 8 667 3313 0 0 0 chrUextra 10817364 10817740 -18186916 - LSU-rRNA_Dme rRNA rRNA -1737 2163 1788 8 667 2770 3 9 3 chrUextra 10817784 10818120 -18186536 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1451 8 667 28 48 0 0 chrUextra 10818464 10818506 -18186150 + AT_rich Low_complexity Low_complexity 1 42 0 8 667 446 119 35 35 chrUextra 10818779 10818866 -18185790 - NTS_DM Other Other -150 90 4 8 667 5463 11 0 53 chrUextra 10819076 10819832 -18184824 + LSU-rRNA_Dme rRNA rRNA 39 754 -3146 8 667 2773 193 20 15 chrUextra 10819932 10820688 -18183968 + SAR_DM Satellite Satellite 1 760 -255 8 667 201 74 0 0 chrUextra 10821065 10821092 -18183564 + (CAAAAA)n Simple_repeat Simple_repeat 6 32 0 8 667 2690 185 40 32 chrUextra 10821650 10822400 -18182256 - SAR_DM Satellite Satellite -281 1191 436 8 667 6324 5 0 1 chrUextra 10822500 10823256 -18181400 - STALKER4_I LTR Gypsy -4454 2076 1322 8 667 6597 0 0 0 chrUextra 10824211 10824966 -18179690 + MDG3_I LTR Gypsy 302 1056 -3930 8 667 2991 185 101 20 chrUextra 10825074 10825819 -18178837 + TAHRE LINE telomeric 9536 10340 -123 8 667 2847 89 5 4 chrUextra 10825921 10826676 -18177980 + G_DM LINE Jockey 532 1274 -768 8 667 2272 127 8 12 chrUextra 10826776 10827531 -18177125 + DMSAT6 Satellite Satellite 1 751 -130 8 667 462 194 0 61 chrUextra 10827632 10827747 -18176909 - HETRP_DM Satellite Satellite -247 1625 1518 8 667 655 186 7 14 chrUextra 10827891 10828033 -18176623 - HETRP_DM Satellite Satellite -203 1669 1529 8 667 642 193 7 14 chrUextra 10828169 10828311 -18176345 - HETRP_DM Satellite Satellite -203 1669 1529 8 667 511 31 0 0 chrUextra 10829343 10829408 -18175248 - R1_DM LINE R1 -5291 65 1 8 667 954 26 0 0 chrUextra 10829441 10829555 -18175101 - R1_DM LINE R1 0 5356 5243 8 667 4380 22 4 7 chrUextra 10829552 10830096 -18174560 - R1_DM LINE R1 -290 5066 4525 8 667 5293 22 0 0 chrUextra 10831084 10831721 -18172935 - Copia2_I LTR Copia 0 4162 3526 8 667 1884 39 8 45 chrUextra 10831994 10832260 -18172396 - BLOOD_LTR LTR Gypsy -143 256 1 8 667 2515 15 199 15 chrUextra 10832260 10832661 -18171995 - BLOOD_I LTR Gypsy 0 6613 6139 8 667 1439 226 39 47 chrUextra 10832762 10833515 -18171141 + SAR_DM Satellite Satellite 1 746 -414 8 667 6113 17 20 7 chrUextra 10833616 10834371 -18170285 + SSU-rRNA_Dme rRNA rRNA 439 1203 -792 8 667 242 96 38 19 chrUextra 10834471 10834524 -18170132 - ARS406_DM Unknown Unknown -205 148 95 8 667 3258 179 7 7 chrUextra 10834486 10835221 -18169435 + SAR_DM Satellite Satellite 203 937 -535 8 667 2837 172 38 28 chrUextra 10835338 10836081 -18168575 - SAR_DM Satellite Satellite -313 1159 410 8 667 6195 9 0 0 chrUextra 10836181 10836936 -18167720 + Invader2_I LTR Gypsy 2594 3348 -1244 8 667 6353 17 7 0 chrUextra 10837036 10837791 -18166865 - Gypsy12_I LTR Gypsy -2099 3447 2688 8 667 2930 202 15 23 chrUextra 10837896 10838645 -18166011 + SAR_DM Satellite Satellite 1 743 -208 8 667 1948 184 7 7 chrUextra 10838751 10839501 -18165155 + SAR_DM Satellite Satellite 1 750 -656 8 667 5969 32 1 0 chrUextra 10839601 10840356 -18164300 - STALKER4_I LTR Gypsy -1178 5352 4597 8 667 6182 0 11 0 chrUextra 10840456 10841211 -18163445 + ROO_I LTR Pao 311 1073 -7183 8 667 3859 42 55 12 chrUextra 10841311 10841823 -18162833 - BATUMI_I LTR Pao -1982 5981 5448 8 667 367 40 0 0 chrUextra 10842016 10842066 -18162590 - DMCR1A LINE CR1 0 4470 4421 8 667 322 24 0 0 chrUextra 10842166 10842207 -18162449 + PROTOP_B DNA P 1113 1153 0 8 667 29 60 0 0 chrUextra 10842549 10842599 -18162057 + AT_rich Low_complexity Low_complexity 1 50 0 8 667 23 68 0 0 chrUextra 10842645 10842689 -18161967 + AT_rich Low_complexity Low_complexity 1 44 0 8 667 21 89 0 0 chrUextra 10842727 10842783 -18161873 + AT_rich Low_complexity Low_complexity 1 56 0 8 667 1400 37 0 9 chrUextra 10843262 10843598 -18161058 + (CTTAT)n Simple_repeat Simple_repeat 1 332 0 8 667 21 0 0 0 chrUextra 10844393 10844414 -18160242 + AT_rich Low_complexity Low_complexity 1 21 0 8 667 2960 192 17 24 chrUextra 10844731 10845486 -18159170 + SAR_DM Satellite Satellite 1 749 -208 8 667 1340 6 0 0 chrUextra 10845586 10845743 -18158913 + R2_DM LINE R2 2857 3013 -594 8 667 3462 2 0 0 chrUextra 10845736 10846132 -18158524 + R2_DM LINE R2 3201 3596 -11 8 667 1842 9 0 0 chrUextra 10846128 10846341 -18158315 + LSU-rRNA_Dme rRNA rRNA 2578 2790 -1110 8 667 2955 192 17 23 chrUextra 10846441 10847196 -18157460 + SAR_DM Satellite Satellite 1 750 -208 8 667 6414 0 0 1 chrUextra 10847296 10848051 -18156605 + MDG3_I LTR Gypsy 3828 4581 -405 8 667 2976 198 15 22 chrUextra 10848155 10848906 -18155750 - SAR_DM Satellite Satellite -581 745 1 8 667 6232 8 15 0 chrUextra 10849006 10849759 -18154897 - Gypsy4_I LTR Gypsy -898 5390 4627 8 667 5888 28 4 12 chrUextra 10849861 10850616 -18154040 - BATUMI_I LTR Pao -5656 2307 1559 8 667 6542 1 0 3 chrUextra 10850716 10851471 -18153185 + LSU-rRNA_Dme rRNA rRNA 2735 3487 -413 8 667 3000 178 17 23 chrUextra 10851573 10852326 -18152330 + SAR_DM Satellite Satellite 409 1157 -315 8 667 2546 205 43 9 chrUextra 10852430 10853179 -18151477 + SAR_DM Satellite Satellite 457 1230 -242 8 667 6491 1 0 0 chrUextra 10853281 10854036 -18150620 - DM176_I LTR Gypsy -3383 3037 2283 8 667 351 167 0 23 chrUextra 10854136 10854222 -18150434 + XDMR_DM Unknown Unknown 268 351 -9 8 667 3071 172 50 19 chrUextra 10854145 10854890 -18149766 - SAR_DM Satellite Satellite -353 1119 352 8 667 6367 11 8 0 chrUextra 10854991 10855746 -18148910 - R1_DM LINE R1 -300 5056 4296 8 667 6423 5 8 0 chrUextra 10855846 10856601 -18148055 + Copia2_I LTR Copia 325 1085 -3077 8 667 835 46 8 8 chrUextra 10856701 10856832 -18147824 + IDEFIX_LTR LTR Gypsy 464 594 0 8 667 25 0 0 0 chrUextra 10857024 10857049 -18147607 + AT_rich Low_complexity Low_complexity 1 25 0 8 667 901 44 0 0 chrUextra 10857342 10857456 -18147200 + IDEFIX_I LTR Gypsy 1 114 -5514 8 667 2582 176 9 12 chrUextra 10857563 10858169 -18146487 - SAR_DM Satellite Satellite -514 744 31 8 667 850 60 0 0 chrUextra 10858169 10858286 -18146370 + ARS406_DM Unknown Unknown 73 189 -164 8 667 2582 176 9 12 chrUextra 10858286 10858310 -18146346 - SAR_DM Satellite Satellite -514 30 1 8 667 6343 4 1 0 chrUextra 10858411 10859166 -18145490 + STALKER4_I LTR Gypsy 4827 5582 -948 8 667 28 48 0 0 chrUextra 10859570 10859612 -18145044 + AT_rich Low_complexity Low_complexity 1 42 0 8 667 476 131 36 0 chrUextra 10859885 10859969 -18144687 - NTS_DM Other Other -150 90 4 8 667 5980 31 5 4 chrUextra 10860122 10860872 -18143784 + CIRCE LINE Composite 2879 3629 -2727 8 667 3105 170 11 11 chrUextra 10860983 10861692 -18142964 - SAR_DM Satellite Satellite -569 903 195 8 667 827 98 0 0 chrUextra 10861599 10861731 -18142925 + ARS406_DM Unknown Unknown 1 132 -221 8 667 3176 25 2 0 chrUextra 10861831 10862224 -18142432 + R1_DM LINE R1 4673 5066 -290 8 667 897 53 0 0 chrUextra 10862221 10862335 -18142321 + R1_DM LINE R1 5243 5356 0 8 667 1510 73 18 0 chrUextra 10862368 10862586 -18142070 + R1_DM LINE R1 1 222 -5134 8 667 6512 1 0 0 chrUextra 10862688 10863441 -18141215 + R1_DM LINE R1 1239 1991 -3365 8 667 2614 0 3 48 chrUextra 10863541 10863872 -18140784 + LSU-rRNA_Dme rRNA rRNA 2317 2632 -1268 8 667 3656 0 5 0 chrUextra 10863872 10864296 -18140360 + R1_DM LINE R1 1 426 -4930 8 667 2540 64 0 0 chrUextra 10864686 10865043 -18139613 + IDEFIX_I LTR Gypsy 3829 4185 -1443 8 667 833 19 9 0 chrUextra 10865043 10865151 -18139505 + IDEFIX_LTR LTR Gypsy 1 109 -485 8 667 3355 201 8 3 chrUextra 10865253 10865995 -18138661 - Stalker2_I LTR Gypsy -2858 4544 3799 8 667 5431 33 36 1 chrUextra 10866109 10866861 -18137795 + Gypsy6_I LTR Gypsy 2656 3951 -3061 8 667 6214 26 1 0 chrUextra 10866961 10867715 -18136941 - R1_DM LINE R1 -1572 3784 3030 8 667 27 29 0 0 chrUextra 10868112 10868146 -18136510 + AT_rich Low_complexity Low_complexity 1 34 0 8 667 250 33 0 0 chrUextra 10868385 10868415 -18136241 + Baggins1 LINE LOA 4727 4756 -697 8 667 689 103 240 7 chrUextra 10868423 10868569 -18136087 + FB4_DM DNA Tc1 3908 4087 -2 8 667 6212 11 25 0 chrUextra 10868671 10869426 -18135230 + DMRT1B LINE R1 3889 4662 -521 8 667 6474 1 0 1 chrUextra 10869526 10870281 -18134375 - R1_DM LINE R1 -1664 3692 2939 8 667 374 307 0 0 chrUextra 10870506 10870633 -18134023 + MICROPIA_I LTR Gypsy 3668 3794 -682 8 667 314 299 101 9 chrUextra 10870719 10870932 -18133724 + MICROPIA_I LTR Gypsy 3434 3850 -626 8 667 470 156 22 0 chrUextra 10871041 10871131 -18133525 - PROTOP_B DNA P -200 953 862 8 667 2699 181 11 3 chrUextra 10871236 10871991 -18132665 + SAR_DM Satellite Satellite 1 760 -677 8 667 1829 39 3 96 chrUextra 10872092 10872404 -18132252 + BATUMI_I LTR Pao 7002 7284 -679 8 667 2381 83 82 32 chrUextra 10872404 10872841 -18131815 + BATUMI_I LTR Pao 1 459 -7504 8 667 6495 11 0 0 chrUextra 10872946 10873701 -18130955 + Invader1_I LTR Gypsy 381 1135 -2051 8 667 6562 0 0 3 chrUextra 10873801 10874556 -18130100 + LSU-rRNA_Dme rRNA rRNA 2679 3431 -469 8 667 6105 21 4 1 chrUextra 10875511 10876266 -18128390 - R1_DM LINE R1 -990 4366 3610 8 667 1599 9 0 0 chrUextra 10876584 10876809 -18127847 + (CTTAT)n Simple_repeat Simple_repeat 1 225 0 8 667 329 176 50 100 chrUextra 10877384 10877504 -18127152 - Copia_I LTR Copia -80 4513 4400 8 667 977 198 84 4 chrUextra 10877737 10877975 -18126681 + HETA LINE telomeric 4020 4276 -1805 8 667 6400 1 1 1 chrUextra 10878076 10878831 -18125825 + MDG3_I LTR Gypsy 2757 3511 -1475 8 668 4859 67 59 3 chrUextra 10878995 10879686 -18124970 + Baggins1 LINE LOA 4205 4934 -519 8 668 780 327 51 35 chrUextra 10879815 10880537 -18124119 - HMSBEAGLE_I LTR Gypsy -1747 4782 4049 8 668 335 296 19 19 chrUextra 10880812 10880974 -18123682 - MDG3_I LTR Gypsy -1562 3424 3263 8 668 291 293 32 8 chrUextra 10881260 10881384 -18123272 - Invader3_I LTR Gypsy -1859 3029 2903 8 668 6412 4 1 1 chrUextra 10881496 10882251 -18122405 - R1_DM LINE R1 -1522 3834 3080 8 668 6579 1 0 1 chrUextra 10882351 10883106 -18121550 + SSU-rRNA_Dme rRNA rRNA 379 1132 -863 8 668 915 99 24 42 chrUextra 10883206 10883374 -18121282 - Invader1_LTR LTR Gypsy -257 166 2 8 668 3010 86 78 102 chrUextra 10883375 10883961 -18120695 - Invader1_I LTR Gypsy 0 3186 2615 8 668 6466 5 0 5 chrUextra 10884061 10884816 -18119840 + MICROPIA_I LTR Gypsy 2579 3329 -1147 8 668 3289 170 13 15 chrUextra 10884917 10885668 -18118988 - SAR_DM Satellite Satellite -435 1037 288 8 668 271 0 0 0 chrUextra 10885771 10885802 -18118854 - DM1731_LTR LTR Copia -305 31 1 8 668 1491 170 14 6 chrUextra 10885805 10886526 -18118130 + SAR_DM Satellite Satellite 1 726 -645 8 668 2287 108 21 26 chrUextra 10886658 10887379 -18117277 - DMSAT6 Satellite Satellite -4 716 1 8 668 2861 68 5 17 chrUextra 10887691 10888097 -18116559 + Baggins1 LINE LOA 4791 5191 -262 8 668 1620 0 0 0 chrUextra 10888336 10888653 -18116003 + (GAGAA)n Simple_repeat Simple_repeat 1 317 0 8 668 3252 3 6 3 chrUextra 10889191 10889555 -18115101 + LSU-rRNA_Dme rRNA rRNA 1427 1791 -2109 8 668 3262 0 3 0 chrUextra 10889596 10889946 -18114710 + LSU-rRNA_Dme rRNA rRNA 1788 2138 -1762 8 668 618 26 13 0 chrUextra 10890046 10890122 -18114534 + MDG3_I LTR Gypsy 2427 2503 -2483 8 668 5870 5 0 29 chrUextra 10890121 10890801 -18113855 + DOC6_DM LINE Jockey 1 660 -3562 8 668 528 188 0 0 chrUextra 10890904 10891042 -18113614 + (CATAA)n Simple_repeat Simple_repeat 2 139 0 8 668 3999 2 0 0 chrUextra 10891043 10891471 -18113185 - ROO_LTR LTR Pao 0 428 1 8 668 1602 11 0 0 chrUextra 10891471 10891656 -18113000 - ROO_I LTR Pao 0 8256 8072 8 668 3744 176 7 7 chrUextra 10891756 10892509 -18112147 + SAR_DM Satellite Satellite 304 1056 -416 8 668 1634 43 5 28 chrUextra 10892611 10892828 -18111828 + BATUMI_I LTR Pao 7073 7284 -679 8 668 3083 87 88 28 chrUextra 10892828 10893361 -18111295 + BATUMI_I LTR Pao 1 565 -7398 8 668 2496 97 11 24 chrUextra 10893466 10894221 -18110435 - DMSAT6 Satellite Satellite -37 745 1 8 668 6835 3 5 0 chrUextra 10894321 10895076 -18109580 + FW_DM LINE Jockey 405 1163 -3529 8 668 1292 0 0 0 chrUextra 10895176 10895314 -18109342 - TABOR_LTR LTR Gypsy -368 138 1 8 668 4424 35 4 18 chrUextra 10895314 10895929 -18108727 - TABOR_I LTR Gypsy -108 6789 5603 8 668 5867 38 61 17 chrUextra 10896031 10896786 -18107870 - Baggins1 LINE LOA -37 5416 4629 8 668 6859 3 0 0 chrUextra 10896887 10897641 -18107015 + ROO_I LTR Pao 6063 6816 -1440 8 668 594 143 105 0 chrUextra 10898391 10898496 -18106160 + DNAREP1_DM LINE Penelope 22 137 -457 8 668 1579 128 57 3 chrUextra 10898863 10899145 -18105511 + DNAREP1_DM LINE Penelope 1 297 -297 8 668 257 335 0 16 chrUextra 10899499 10899681 -18104975 + (CAG)n Simple_repeat Simple_repeat 2 180 0 8 668 267 335 0 0 chrUextra 10899862 10900014 -18104642 + (CAG)n Simple_repeat Simple_repeat 2 153 0 8 668 204 349 0 0 chrUextra 10900060 10900206 -18104450 + (CAG)n Simple_repeat Simple_repeat 2 147 0 8 668 1751 170 31 23 chrUextra 10900306 10900692 -18103964 - SAR_DM Satellite Satellite -525 947 559 8 668 3411 3 0 0 chrUextra 10900688 10901061 -18103595 + DOC LINE Jockey 2441 2813 -1912 8 668 1808 141 13 101 chrUextra 10901161 10901539 -18103117 - TART LINE telomeric -7475 7002 6658 8 668 3097 40 0 3 chrUextra 10901536 10901916 -18102740 - TART LINE telomeric -13721 756 378 8 668 5196 31 0 114 chrUextra 10902017 10902771 -18101885 - CIRCE LINE Composite -4580 1776 1109 8 668 3538 10 0 0 chrUextra 10902871 10903258 -18101398 + TABOR_LTR LTR Gypsy 120 506 0 8 668 1620 0 0 0 chrUextra 10903261 10903621 -18101035 + (TTGTG)n Simple_repeat Simple_repeat 1 360 0 8 668 6771 7 0 0 chrUextra 10903726 10904481 -18100175 + STALKER4_I LTR Gypsy 5324 6078 -452 8 668 195 42 0 0 chrUextra 10905163 10905187 -18099469 + (TC)n Simple_repeat Simple_repeat 1 24 0 8 668 6377 27 1 8 chrUextra 10906291 10907045 -18097611 + R1_DM LINE R1 2261 3009 -2347 8 668 302 140 0 0 chrUextra 10908576 10908626 -18096030 - DM297_LTR LTR Gypsy -364 50 1 8 668 700 71 278 0 chrUextra 10908626 10908752 -18095904 - DM297_I LTR Gypsy 0 6167 6007 8 668 267 51 51 0 chrUextra 10908853 10908892 -18095764 - R1_DM LINE R1 -5315 41 1 8 668 5908 28 1 0 chrUextra 10908925 10909607 -18095049 - R1_DM LINE R1 0 5356 4674 8 668 5929 32 8 8 chrUextra 10909707 10910461 -18094195 - DM176_I LTR Gypsy -5446 974 221 8 668 5521 10 2 2 chrUextra 10910561 10911172 -18093484 - LSU-rRNA_Dme rRNA rRNA -1502 2398 1788 8 668 857 10 0 10 chrUextra 10911213 10911315 -18093341 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1691 8 668 1572 216 34 0 chrUextra 10911426 10911745 -18092911 + TIRANT_I LTR Gypsy 2392 2721 -4971 8 668 3753 14 16 0 chrUextra 10911745 10912169 -18092487 + PROTOP_A DNA P 1 431 -674 8 668 5711 60 3 24 chrUextra 10912269 10913019 -18091637 + CIRCE LINE Composite 2100 2833 -3523 8 668 6575 20 21 0 chrUextra 10913123 10913877 -18090779 - R1_DM LINE R1 -2674 2682 1913 8 668 6276 1 0 61 chrUextra 10913977 10914731 -18089925 + LSU-rRNA_Dme rRNA rRNA 1724 2431 -1469 8 668 3293 195 20 11 chrUextra 10914831 10915581 -18089075 + SAR_DM Satellite Satellite 403 1159 -313 8 668 6531 27 0 3 chrUextra 10915692 10916439 -18088217 + BATUMI_I LTR Pao 4315 5059 -2904 8 668 583 293 93 49 chrUextra 10916724 10917292 -18087364 - ROVER-I_DM LTR Gypsy -4702 1882 1290 8 668 3646 172 15 19 chrUextra 10917393 10918147 -18086509 - SAR_DM Satellite Satellite -466 1006 256 8 668 6716 17 0 0 chrUextra 10918247 10919001 -18085655 - DMRT1A LINE R1 -1390 3793 3040 8 668 4553 92 152 1 chrUextra 10919101 10919855 -18084801 - Stalker2_I LTR Gypsy -3592 3810 2943 8 668 3707 28 62 15 chrUextra 10919955 10920419 -18084237 - ROO_I LTR Pao -3578 4678 4193 8 668 2442 28 3 0 chrUextra 10920426 10920709 -18083947 + FW_DM LINE Jockey 1748 2031 -2661 8 668 7035 0 3 0 chrUextra 10920809 10921563 -18083093 + LSU-rRNA_Dme rRNA rRNA 3073 3828 -72 8 668 5311 14 49 41 chrUextra 10921663 10922322 -18082334 + CIRCE LINE Composite 307 970 -5386 8 668 1507 204 3 6 chrUextra 10922538 10922893 -18081763 + DM297_I LTR Gypsy 4381 4734 -1433 8 668 1124 151 0 0 chrUextra 10922891 10923083 -18081573 + DM297_I LTR Gypsy 5490 5681 -486 8 668 936 128 0 0 chrUextra 10923082 10923223 -18081433 + DM176_I LTR Gypsy 6278 6418 -2 8 668 2436 17 0 7 chrUextra 10923371 10923667 -18080989 + TART LINE telomeric 14183 14476 -1 8 668 1247 194 249 15 chrUextra 10923667 10923997 -18080659 + TART LINE telomeric 3623 4029 -10448 8 668 495 207 29 40 chrUextra 10923972 10924125 -18080531 + TART_B1 LINE telomeric 8329 8453 -2201 8 668 791 139 0 0 chrUextra 10924225 10924369 -18080287 - TART_B1 LINE telomeric -8989 1665 1522 8 668 2856 98 4 57 chrUextra 10924390 10924846 -18079810 - TART LINE telomeric -8723 5754 5323 8 668 993 137 0 0 chrUextra 10924826 10924979 -18079677 - TART LINE telomeric -10594 3883 3731 8 668 813 75 75 8 chrUextra 10925079 10925213 -18079443 + R1_DM LINE R1 591 733 -4623 8 668 5318 42 0 0 chrUextra 10925209 10925833 -18078823 + R1_DM LINE R1 1224 1847 -3509 8 668 7040 3 0 0 chrUextra 10925933 10926687 -18077969 + LSU-rRNA_Dme rRNA rRNA 2460 3213 -687 8 668 996 17 0 0 chrUextra 10926787 10926905 -18077751 + (GAGAA)n Simple_repeat Simple_repeat 2 119 0 8 668 3990 2 0 0 chrUextra 10926905 10927332 -18077324 + ROO_LTR LTR Pao 1 427 -1 8 668 1620 0 0 0 chrUextra 10927332 10927539 -18077117 + (GAGAA)n Simple_repeat Simple_repeat 1 207 0 8 668 639 0 0 0 chrUextra 10928495 10928566 -18076090 + (CAAGA)n Simple_repeat Simple_repeat 1 71 0 8 668 7046 0 1 0 chrUextra 10929350 10930103 -18074553 - LSU-rRNA_Dme rRNA rRNA -400 3500 2747 8 668 6849 7 15 0 chrUextra 10930203 10930957 -18073699 - Gypsy4_I LTR Gypsy -2662 3626 2862 8 668 265 235 0 0 chrUextra 10931058 10931109 -18073547 + Gypsy12A_LTR LTR Gypsy 414 464 -1816 8 668 1518 269 29 73 chrUextra 10931121 10931776 -18072880 + Gypsy12_LTR LTR Gypsy 524 1149 -1187 8 668 27 0 0 0 chrUextra 10931782 10931809 -18072847 + AT_rich Low_complexity Low_complexity 1 27 0 8 668 6689 7 0 1 chrUextra 10931924 10932665 -18071991 - DMRT1B LINE R1 -2785 2398 1659 8 668 1752 307 45 19 chrUextra 10932768 10933501 -18071155 + MICROPIA_I LTR Gypsy 1910 2661 -1815 8 668 922 18 0 27 chrUextra 10933624 10933736 -18070920 + NTS_DM Other Other 25 133 -107 8 668 1325 30 0 6 chrUextra 10933736 10933901 -18070755 + NTS_DM Other Other 38 201 -39 8 668 21 57 0 0 chrUextra 10933901 10933936 -18070720 + AT_rich Low_complexity Low_complexity 1 35 0 8 668 870 28 9 27 chrUextra 10933962 10934073 -18070583 + NTS_DM Other Other 25 133 -107 8 668 876 0 0 0 chrUextra 10934073 10934169 -18070487 + NTS_DM Other Other 38 133 -107 8 668 1488 20 25 20 chrUextra 10934169 10934371 -18070285 + NTS_DM Other Other 38 240 0 8 668 2084 184 8 5 chrUextra 10934473 10935209 -18069447 - SAR_DM Satellite Satellite -673 737 1 8 668 6693 7 0 3 chrUextra 10935327 10936081 -18068575 - MDG3_I LTR Gypsy -1642 3344 2593 8 668 876 30 30 30 chrUextra 10936181 10936316 -18068340 + NTS_DM Other Other 106 240 0 8 668 1995 4 17 13 chrUextra 10936316 10936555 -18068101 + NTS_DM Other Other 1 240 0 8 668 1992 4 17 13 chrUextra 10936555 10936794 -18067862 + NTS_DM Other Other 1 240 0 8 668 1219 14 7 0 chrUextra 10936794 10936935 -18067721 + NTS_DM Other Other 1 142 -98 8 668 201 121 0 0 chrUextra 10937692 10937725 -18066931 + (GA)n Simple_repeat Simple_repeat 1 33 0 8 668 3502 187 13 9 chrUextra 10937889 10938643 -18066013 - SAR_DM Satellite Satellite -495 977 221 8 668 4815 6 0 0 chrUextra 10938977 10939497 -18065159 - Invader1_I LTR Gypsy -1349 1837 1318 8 668 385 179 0 23 chrUextra 10939597 10939683 -18064973 + XDMR_DM Unknown Unknown 268 351 -9 8 668 3130 173 11 63 chrUextra 10939606 10940348 -18064308 - SAR_DM Satellite Satellite -354 1118 416 8 668 3024 193 32 24 chrUextra 10940451 10941199 -18063457 + SAR_DM Satellite Satellite 428 1181 -291 8 668 6513 33 0 0 chrUextra 10941305 10942059 -18062597 - BATUMI_I LTR Pao -2704 5259 4506 8 668 1173 73 0 0 chrUextra 10942162 10942340 -18062316 + (CTTAT)n Simple_repeat Simple_repeat 1 178 0 8 668 186 43 0 0 chrUextra 10942340 10942363 -18062293 + (TTTTC)n Simple_repeat Simple_repeat 1 23 0 8 668 225 295 43 43 chrUextra 10943451 10943568 -18061088 - Copia2_I LTR Copia -1948 2214 2098 8 668 288 311 53 13 chrUextra 10943598 10943748 -18060908 - Copia_I LTR Copia -2477 2116 1961 8 668 5076 53 1 50 chrUextra 10943867 10944621 -18060035 + BATUMI_I LTR Pao 2423 3139 -4824 8 668 6617 0 1 0 chrUextra 10944721 10945475 -18059181 + R2_DM LINE R2 1874 2628 -979 8 668 2051 295 12 12 chrUextra 10945575 10946323 -18058333 + FROGGER_I LTR Copia 783 1530 -547 8 668 3456 0 0 2 chrUextra 10946430 10946829 -18057827 + LSU-rRNA_Dme rRNA rRNA 2235 2632 -1268 8 668 3050 0 6 0 chrUextra 10946829 10947183 -18057473 + R1_DM LINE R1 1 356 -5000 8 668 6473 0 1 4 chrUextra 10947283 10948037 -18056619 - SSU-rRNA_Dme rRNA rRNA -516 1479 728 8 668 1491 6 0 0 chrUextra 10948137 10948316 -18056340 - NTS_DM Other Other -61 179 1 8 668 1826 8 17 13 chrUextra 10948316 10948555 -18056101 - NTS_DM Other Other 0 240 1 8 668 2473 7 0 0 chrUextra 10948605 10948891 -18055765 - R1_DM LINE R1 -775 4581 4296 8 668 6506 0 0 0 chrUextra 10948991 10949745 -18054911 - BLOOD_I LTR Gypsy -1687 4926 4173 8 668 6511 3 0 3 chrUextra 10950699 10951453 -18053203 - LSU-rRNA_Dme rRNA rRNA -518 3382 2631 8 668 381 259 0 9 chrUextra 10951553 10951662 -18052994 + Invader1_I LTR Gypsy 1988 2095 -1091 8 668 559 235 7 7 chrUextra 10951662 10951816 -18052840 + Invader1_I LTR Gypsy 2416 2569 -617 8 668 3276 179 16 9 chrUextra 10952407 10953161 -18051495 + SAR_DM Satellite Satellite 247 1005 -467 8 668 6410 3 0 0 chrUextra 10954115 10954869 -18049787 - ROO_I LTR Pao -1769 6487 5734 8 668 3387 150 12 17 chrUextra 10954971 10955622 -18049034 + TAHRE LINE telomeric 9807 10454 -9 8 668 213 109 0 52 chrUextra 10955625 10955683 -18048973 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 8 668 239 154 0 0 chrUextra 10955823 10955862 -18048794 - LSU-rRNA_Dme rRNA rRNA -1281 2619 2581 8 668 22 56 0 0 chrUextra 10955867 10955903 -18048753 + AT_rich Low_complexity Low_complexity 1 36 0 8 668 5226 2 2 2 chrUextra 10955975 10956577 -18048079 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 8 668 1064 30 0 0 chrUextra 10956677 10956810 -18047846 - DMRT1B LINE R1 -2136 3047 2915 8 668 5311 10 0 0 chrUextra 10956804 10957431 -18047225 - DMRT1B LINE R1 -2373 2810 2184 8 668 332 25 0 0 chrUextra 10959239 10959279 -18045377 - NTS_DM Other Other -200 40 1 8 668 1731 21 17 17 chrUextra 10959279 10959519 -18045137 - NTS_DM Other Other 0 240 1 8 668 1756 17 17 17 chrUextra 10959519 10959759 -18044897 - NTS_DM Other Other 0 240 1 8 668 820 11 365 17 chrUextra 10959759 10959937 -18044719 - NTS_DM Other Other 0 240 1 8 668 318 0 71 54 chrUextra 10959937 10959993 -18044663 - NTS_DM Other Other 0 240 184 8 668 4869 42 88 5 chrUextra 10960093 10960847 -18043809 + IDEFIX_I LTR Gypsy 1418 2233 -3395 8 668 2476 151 43 35 chrUextra 10960947 10961546 -18043110 + SAR_DM Satellite Satellite 195 798 -674 8 668 320 260 46 33 chrUextra 10961543 10961694 -18042962 - XDMR_DM Unknown Unknown 0 360 208 8 668 645 113 26 0 chrUextra 10961586 10961701 -18042955 + SAR_DM Satellite Satellite 369 486 -986 8 668 1289 137 85 0 chrUextra 10961801 10962049 -18042607 + MAX_LTR LTR Pao 53 321 0 8 668 33 0 0 0 chrUextra 10962126 10962159 -18042497 + AT_rich Low_complexity Low_complexity 1 33 0 8 668 23 68 0 0 chrUextra 10962205 10962249 -18042407 + AT_rich Low_complexity Low_complexity 1 44 0 8 668 27 81 0 0 chrUextra 10962280 10962342 -18042314 + AT_rich Low_complexity Low_complexity 1 62 0 8 668 545 320 63 6 chrUextra 10962986 10963319 -18041337 + Gypsy5_I LTR Gypsy 2195 2546 -3963 8 668 268 238 0 0 chrUextra 10963323 10963386 -18041270 + Gypsy5_I LTR Gypsy 2747 2809 -3700 8 668 3164 0 0 11 chrUextra 10963509 10963884 -18040772 - TART LINE telomeric -3051 11426 11056 8 668 462 230 32 38 chrUextra 10963886 10964044 -18040612 - TART LINE telomeric -2169 8485 8329 8 668 864 176 270 13 chrUextra 10964019 10964249 -18040407 - TART LINE telomeric -10448 4029 3741 8 668 6596 3 0 0 chrUextra 10964365 10965117 -18039539 - R2_DM LINE R2 -1308 2299 1548 8 668 6026 16 16 12 chrUextra 10965217 10965971 -18038685 + FW_DM LINE Jockey 1412 2168 -2524 8 668 6081 3 16 4 chrUextra 10966071 10966825 -18037831 - MAX_I LTR Pao -6416 1498 736 8 668 362 97 0 16 chrUextra 10966925 10966988 -18037668 - ARS406_DM Unknown Unknown -291 62 1 8 668 3097 179 12 10 chrUextra 10966948 10967679 -18036977 + SAR_DM Satellite Satellite 246 978 -494 8 668 3650 0 0 0 chrUextra 10967779 10968192 -18036464 - HOBO DNA hAT -2603 413 1 8 668 2826 24 0 0 chrUextra 10968192 10968533 -18036123 + Invader3_I LTR Gypsy 3656 3996 -892 8 668 4935 0 0 2 chrUextra 10968633 10969216 -18035440 - MICROPIA_I LTR Gypsy -12 4464 3883 8 668 1518 11 0 0 chrUextra 10969211 10969387 -18035269 - MICROPIA_I LTR Gypsy -1066 3410 3235 8 668 407 280 12 12 chrUextra 10969955 10970125 -18034531 + Copia_I LTR Copia 2054 2223 -2370 8 668 2984 192 21 10 chrUextra 10970354 10971095 -18033561 + SAR_DM Satellite Satellite 1 749 -396 8 668 6071 9 44 0 chrUextra 10972049 10972803 -18031853 + Gypsy4_I LTR Gypsy 4560 5346 -942 8 668 5233 0 0 0 chrUextra 10972903 10973506 -18031150 + QUASIMODO_LTR LTR Gypsy 56 658 0 8 668 1294 0 7 0 chrUextra 10973506 10973657 -18030999 + QUASIMODO_I LTR Gypsy 1 152 -5908 8 668 6263 16 0 7 chrUextra 10973757 10974511 -18030145 - DOC2_DM LINE Jockey -470 4323 3575 8 668 1449 0 0 0 chrUextra 10975204 10975365 -18029291 + (TTCTC)n Simple_repeat Simple_repeat 2 162 0 8 668 5151 51 6 3 chrUextra 10975465 10976219 -18028437 - G2_DM LINE Jockey -2499 603 4 8 668 4617 106 49 7 chrUextra 10976323 10977073 -18027583 - TART LINE telomeric -8252 6225 5444 8 668 3043 44 3 0 chrUextra 10977460 10977844 -18026812 - DIVER2_LTR LTR Pao 0 385 1 8 668 653 36 0 0 chrUextra 10977844 10977927 -18026729 - DIVER2_I LTR Pao 0 4147 4065 8 668 6421 0 0 0 chrUextra 10978027 10978781 -18025875 + DOC LINE Jockey 595 1348 -3377 8 668 6407 1 1 7 chrUextra 10978881 10979635 -18025021 + LSU-rRNA_Dme rRNA rRNA 794 1543 -2357 8 668 2193 181 93 12 chrUextra 10979737 10980340 -18024316 + SAR_DM Satellite Satellite 425 1076 -396 8 668 597 162 0 15 chrUextra 10980353 10980485 -18024171 + SAR_DM Satellite Satellite 766 895 -577 8 668 6119 30 1 0 chrUextra 10981443 10982197 -18022459 + R1_DM LINE R1 2656 3410 -1946 8 668 667 23 0 34 chrUextra 10982299 10982388 -18022268 - NTS_DM Other Other -130 110 25 8 668 1252 18 0 6 chrUextra 10982440 10982605 -18022051 - NTS_DM Other Other -39 201 38 8 668 870 9 0 27 chrUextra 10982605 10982717 -18021939 - NTS_DM Other Other -107 133 25 8 668 1252 18 0 6 chrUextra 10982769 10982934 -18021722 - NTS_DM Other Other -39 201 38 8 668 833 9 9 27 chrUextra 10982934 10983045 -18021611 - NTS_DM Other Other -107 133 25 8 668 2762 21 179 0 chrUextra 10983151 10983284 -18021372 + TART LINE telomeric 7583 7722 -6755 8 668 549 55 0 0 chrUextra 10983284 10983357 -18021299 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 8 668 2762 21 179 0 chrUextra 10983357 10983609 -18021047 + TART LINE telomeric 7723 8035 -6442 8 668 1504 27 37 0 chrUextra 10983608 10983796 -18020860 + TART LINE telomeric 7528 7722 -6755 8 668 549 55 0 0 chrUextra 10983796 10983869 -18020787 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 8 668 257 0 0 0 chrUextra 10983869 10983905 -18020751 + TART LINE telomeric 7786 7821 -6656 8 668 6184 15 0 4 chrUextra 10984005 10984759 -18019897 + STALKER4_I LTR Gypsy 1568 2318 -4212 8 668 6454 0 0 0 chrUextra 10984859 10985613 -18019043 + BLOOD_I LTR Gypsy 5286 6039 -574 8 668 28 48 0 0 chrUextra 10986266 10986308 -18018348 + AT_rich Low_complexity Low_complexity 1 42 0 8 668 5800 1 4 6 chrUextra 10986628 10987321 -18017335 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1097 8 668 1000 53 0 0 chrUextra 10987421 10987553 -18017103 + CIRCE LINE Composite 4849 4980 -1376 8 668 1803 64 19 11 chrUextra 10987907 10988175 -18016481 + CIRCE LINE Composite 4981 5250 -1106 8 668 6389 0 0 1 chrUextra 10988278 10989029 -18015627 - LSU-rRNA_Dme rRNA rRNA -2690 1210 461 8 668 3733 164 1 3 chrUextra 10989198 10989883 -18014773 - ROVER-I_DM LTR Gypsy -1276 5308 4625 8 668 3770 191 1 0 chrUextra 10989983 10990735 -18013921 + ROVER-I_DM LTR Gypsy 3277 4029 -2555 8 668 5830 50 1 1 chrUextra 10990837 10991591 -18013065 - R1_DM LINE R1 -3585 1771 1018 8 668 719 12 0 0 chrUextra 10991691 10991776 -18012880 + DM176_LTR LTR Gypsy 199 283 -224 8 668 2020 20 16 0 chrUextra 10991777 10992030 -18012626 + DM176_LTR LTR Gypsy 251 507 0 8 668 1124 25 0 0 chrUextra 10992032 10992193 -18012463 + ACCORD2_I LTR Gypsy 1862 2022 -5190 8 668 2151 8 0 0 chrUextra 10992194 10992445 -18012211 + ACCORD2_I LTR Gypsy 2450 2700 -4512 8 668 802 62 62 14 chrUextra 10992545 10992691 -18011965 + IDEFIX_LTR LTR Gypsy 442 594 0 8 668 25 0 0 0 chrUextra 10992882 10992907 -18011749 + AT_rich Low_complexity Low_complexity 1 25 0 8 668 315 50 0 0 chrUextra 10993177 10993217 -18011439 + IDEFIX_I LTR Gypsy 1 40 -5588 8 668 595 49 0 0 chrUextra 10993217 10993299 -18011357 + DMCR1A LINE CR1 4237 4318 -152 8 668 946 29 51 0 chrUextra 10993399 10993536 -18011120 + DOC2_DM LINE Jockey 1304 1447 -3346 8 668 4791 14 20 2 chrUextra 10993520 10994106 -18010550 + DOC2_DM LINE Jockey 1556 2152 -2641 8 668 293 0 0 0 chrUextra 10994119 10994153 -18010503 + DOC2_DM LINE Jockey 2223 2256 -2537 8 668 1229 20 0 0 chrUextra 10994253 10994402 -18010254 - FW_DM LINE Jockey -4543 149 1 8 668 653 76 76 0 chrUextra 10995112 10995217 -18009439 - DM176_I LTR Gypsy -3948 2472 2360 8 668 339 105 0 0 chrUextra 10995245 10995302 -18009354 + (TAA)n Simple_repeat Simple_repeat 3 59 0 8 668 1906 88 74 3 chrUextra 10995304 10995602 -18009054 + MDG1_LTR LTR Gypsy 94 412 -30 8 668 1870 31 16 12 chrUextra 10995603 10995861 -18008795 + DMCR1A LINE CR1 1 259 -4211 8 668 5233 28 49 9 chrUextra 10996023 10996715 -18007941 - BATUMI_I LTR Pao -5356 2607 1888 8 668 1281 7 0 0 chrUextra 10996818 10996967 -18007689 + ROO_LTR LTR Pao 280 428 0 8 668 5027 0 15 0 chrUextra 10996967 10997568 -18007088 + ROO_I LTR Pao 1 610 -7646 8 668 6341 7 3 1 chrUextra 10997668 10998421 -18006235 - R1_DM LINE R1 -848 4508 3755 8 668 268 125 0 0 chrUextra 10998521 10998569 -18006087 - ARS406_DM Unknown Unknown -305 48 1 8 668 3269 171 12 11 chrUextra 10998529 10999274 -18005382 + SAR_DM Satellite Satellite 246 991 -481 8 668 597 156 16 24 chrUextra 10999384 10999509 -18005147 + HETRP_DM Satellite Satellite 1546 1669 -203 8 668 296 174 250 42 chrUextra 10999667 10999763 -18004893 + HETRP_DM Satellite Satellite 1519 1634 -238 8 668 787 170 6 19 chrUextra 10999811 10999967 -18004689 + HETRP_DM Satellite Satellite 1516 1669 -203 8 668 950 67 0 0 chrUextra 11000227 11000361 -18004295 + TART LINE telomeric 1726 1859 -12618 8 668 4739 48 11 0 chrUextra 11000352 11000980 -18003676 + TART LINE telomeric 2045 2679 -11798 8 668 332 304 0 0 chrUextra 11001110 11001222 -18003434 - G5_DM LINE Jockey -4077 779 668 8 668 1506 123 25 0 chrUextra 11001585 11001828 -18002828 + BS2 LINE Jockey 1332 1580 -3141 8 668 6255 20 12 0 chrUextra 11001933 11002686 -18001970 - CIRCE LINE Composite -16 6340 5579 8 668 5794 52 1 4 chrUextra 11002786 11003539 -18001117 + MAX_I LTR Pao 2328 3078 -4836 8 668 3255 179 8 15 chrUextra 11003642 11004390 -18000266 + SAR_DM Satellite Satellite 369 1111 -361 8 668 21 89 0 0 chrUextra 11004723 11004779 -17999877 + AT_rich Low_complexity Low_complexity 1 56 0 8 668 23 68 0 0 chrUextra 11004817 11004861 -17999795 + AT_rich Low_complexity Low_complexity 1 44 0 8 668 29 60 0 0 chrUextra 11004907 11004957 -17999699 + AT_rich Low_complexity Low_complexity 1 50 0 8 668 692 31 21 0 chrUextra 11005345 11005441 -17999215 - BATUMI_I LTR Pao -1285 6678 6581 8 668 2732 67 127 5 chrUextra 11005491 11006068 -17998588 + BATUMI_I LTR Pao 7303 7949 -14 8 668 5727 35 5 11 chrUextra 11007051 11007804 -17996852 + BATUMI_I LTR Pao 3042 3790 -4173 8 668 1309 146 22 18 chrUextra 11008759 11009032 -17995624 + MDG1_LTR LTR Gypsy 139 412 -30 8 668 1828 163 37 6 chrUextra 11009033 11009510 -17995146 + BS3_DM LINE Jockey 1 278 -1512 8 83 5947 44 0 0 chrUextra 11009612 11010360 -17994296 + BATUMI_I LTR Pao 4406 5153 -2810 8 669 2628 20 3 0 chrUextra 11010463 11010804 -17993852 - PROTOP DNA P -337 4143 3802 8 669 2776 39 43 10 chrUextra 11010799 11011216 -17993440 - PROTOP DNA P -3657 823 393 8 669 1546 74 0 0 chrUextra 11011317 11011533 -17993123 - MAX_LTR LTR Pao -105 216 1 8 669 4014 45 0 0 chrUextra 11011539 11012069 -17992587 - MAX_I LTR Pao -2 7912 7383 8 669 655 186 7 14 chrUextra 11012210 11012352 -17992304 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 629 193 7 14 chrUextra 11012487 11012629 -17992027 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 662 200 6 19 chrUextra 11012753 11012911 -17991745 - HETRP_DM Satellite Satellite -188 1684 1529 8 669 6308 16 1 0 chrUextra 11013022 11013775 -17990881 + DMRT1A LINE R1 3229 3982 -1201 8 669 237 172 15 15 chrUextra 11013875 11013940 -17990716 + XDMR Unknown Unknown 297 361 0 8 669 3080 176 16 19 chrUextra 11013884 11014627 -17990029 - SAR_DM Satellite Satellite -354 1118 378 8 669 6600 1 0 0 chrUextra 11014728 11015481 -17989175 + LSU-rRNA_Dme rRNA rRNA 2709 3461 -439 8 669 5549 46 47 1 chrUextra 11015588 11016334 -17988322 - R1_DM LINE R1 -3897 1459 680 8 669 1039 16 0 0 chrUextra 11016434 11016563 -17988093 - Copia_LTR LTR Copia -147 129 1 8 669 1850 4 17 13 chrUextra 11016583 11016822 -17987834 + NTS_DM Other Other 1 240 0 8 669 1861 0 17 13 chrUextra 11016822 11017061 -17987595 + NTS_DM Other Other 1 240 0 8 669 1034 0 8 0 chrUextra 11017061 11017184 -17987472 + NTS_DM Other Other 1 124 -116 8 669 37 39 0 0 chrUextra 11017333 11017384 -17987272 + AT_rich Low_complexity Low_complexity 1 51 0 8 669 22 35 0 0 chrUextra 11017485 11017514 -17987142 + AT_rich Low_complexity Low_complexity 1 29 0 8 669 21 57 0 0 chrUextra 11017704 11017739 -17986917 + AT_rich Low_complexity Low_complexity 1 35 0 8 669 2025 0 0 0 chrUextra 11017739 11017979 -17986677 + ALUII_DM Unknown Unknown 1 240 0 8 669 3618 0 0 0 chrUextra 11018140 11018553 -17986103 + LSU-rRNA_Dme rRNA rRNA 2226 2638 -1262 8 669 2943 6 0 0 chrUextra 11018550 11018893 -17985763 + R1_DM LINE R1 4840 5182 -174 8 669 6311 11 1 7 chrUextra 11018993 11019746 -17984910 - MICROPIA_I LTR Gypsy -952 3524 2776 8 669 229 143 20 0 chrUextra 11019913 11019962 -17984694 - RSP Satellite Satellite -9 109 60 8 669 229 143 20 0 chrUextra 11020078 11020127 -17984529 - RSP Satellite Satellite -9 109 60 8 669 229 143 20 0 chrUextra 11020244 11020293 -17984363 - RSP Satellite Satellite -9 109 60 8 669 229 143 20 0 chrUextra 11020410 11020459 -17984197 - RSP Satellite Satellite -9 109 60 8 669 5507 1 0 37 chrUextra 11020699 11021395 -17983261 - LSU-rRNA_Dme rRNA rRNA -3230 670 1 8 669 34 24 0 0 chrUextra 11021920 11021961 -17982695 + AT_rich Low_complexity Low_complexity 1 41 0 8 669 21 95 0 0 chrUextra 11022174 11022237 -17982419 + AT_rich Low_complexity Low_complexity 1 63 0 8 669 421 0 0 18 chrUextra 11022250 11022305 -17982351 + LSU-rRNA_Dme rRNA rRNA 2 55 -3845 8 669 272 208 149 106 chrUextra 11022405 11022566 -17982090 + HETA LINE telomeric 5556 5723 -358 8 669 518 108 81 0 chrUextra 11022566 11022677 -17981979 + TART LINE telomeric 10370 10489 -3988 8 669 34 24 0 0 chrUextra 11022690 11022731 -17981925 + AT_rich Low_complexity Low_complexity 1 41 0 8 669 432 125 0 0 chrUextra 11023258 11023330 -17981326 - DNAREP1_DM LINE Penelope -522 72 1 8 669 22 56 0 0 chrUextra 11023917 11023953 -17980703 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 6431 8 0 0 chrUextra 11024111 11024864 -17979792 - DM1731_I LTR Copia -3183 793 41 8 669 3364 182 5 7 chrUextra 11025817 11026568 -17978088 - SAR_DM Satellite Satellite -486 986 237 8 669 6122 12 3 0 chrUextra 11026671 11027423 -17977233 + DM176_I LTR Gypsy 1927 2680 -3740 8 669 4818 2 0 0 chrUextra 11027524 11028075 -17976581 - LSU-rRNA_Dme rRNA rRNA -710 3190 2640 8 669 1693 10 0 5 chrUextra 11028073 11028276 -17976380 - R1_DM LINE R1 0 5356 5155 8 669 3029 178 19 23 chrUextra 11028376 11029127 -17975529 + SAR_DM Satellite Satellite 412 1159 -313 8 669 6451 1 0 0 chrUextra 11030082 11030835 -17973821 + ROO_I LTR Pao 5980 6732 -1524 8 669 488 119 36 0 chrUextra 11031207 11031291 -17973365 - NTS_DM Other Other -150 90 4 8 669 1301 6 0 18 chrUextra 11031401 11031566 -17973090 - NTS_DM Other Other -78 162 1 8 669 804 17 33 25 chrUextra 11031566 11031688 -17972968 - NTS_DM Other Other 0 240 118 8 669 3295 167 49 17 chrUextra 11031788 11032535 -17972121 - SAR_DM Satellite Satellite -436 770 1 8 669 256 128 0 0 chrUextra 11032494 11032541 -17972115 + ARS406_DM Unknown Unknown 1 47 -306 8 669 5603 48 3 4 chrUextra 11032641 11033387 -17971269 + STALKER4_I LTR Gypsy 4432 5176 -1354 8 669 6095 9 7 0 chrUextra 11033512 11034247 -17970409 + FW_DM LINE Jockey 2600 3339 -1353 8 669 3314 171 32 7 chrUextra 11034348 11035100 -17969556 - SAR_DM Satellite Satellite -435 1037 267 8 669 305 279 107 89 chrUextra 11035470 11035750 -17968906 - Invader1_LTR LTR Gypsy -55 368 84 8 669 5860 41 25 0 chrUextra 11036054 11036806 -17967850 - DMCR1A LINE CR1 -2654 1816 1046 8 669 657 104 0 0 chrUextra 11036906 11037012 -17967644 - ARS406_DM Unknown Unknown -247 106 1 8 669 3227 179 8 9 chrUextra 11036919 11037659 -17966997 + SAR_DM Satellite Satellite 195 933 -539 8 669 6024 17 23 0 chrUextra 11037763 11038512 -17966144 + ROO_I LTR Pao 1048 1813 -6443 8 669 6283 15 0 7 chrUextra 11038612 11039365 -17965291 - BATUMI_I LTR Pao -1557 6406 5659 8 669 6554 3 0 1 chrUextra 11039465 11040218 -17964438 + SSU-rRNA_Dme rRNA rRNA 14 765 -1230 8 669 522 0 0 0 chrUextra 11041013 11041071 -17963585 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 8 669 3504 25 0 5 chrUextra 11041171 11041616 -17963040 - Invader2_I LTR Gypsy -2277 2315 1873 8 669 2178 32 122 37 chrUextra 11041603 11041924 -17962732 - Invader2_I LTR Gypsy -3373 1219 872 8 669 5292 23 0 0 chrUextra 11042131 11042777 -17961879 + DOC2_DM LINE Jockey 2535 3180 -1613 8 669 2038 185 22 9 chrUextra 11042878 11043630 -17961026 + SAR_DM Satellite Satellite 1 761 -749 8 669 2176 8 0 0 chrUextra 11043730 11043986 -17960670 + DOC LINE Jockey 1764 2019 -2706 8 669 4326 2 0 0 chrUextra 11043980 11044483 -17960173 + DOC LINE Jockey 3124 3626 -1099 8 669 4295 45 9 0 chrUextra 11044583 11045160 -17959496 + IDEFIX_I LTR Gypsy 283 864 -4764 8 669 1215 31 0 0 chrUextra 11045177 11045336 -17959320 + IDEFIX_I LTR Gypsy 2190 2348 -3280 8 669 5505 40 0 24 chrUextra 11045436 11046187 -17958469 + R1_DM LINE R1 321 1053 -4303 8 669 2299 78 13 56 chrUextra 11046289 11046682 -17957974 - Gypsy12_I LTR Gypsy -5170 376 1 8 669 2004 116 28 14 chrUextra 11046682 11047039 -17957617 - Gypsy12A_LTR LTR Gypsy 0 2280 1919 8 669 6155 5 1 1 chrUextra 11047142 11047895 -17956761 + MDG1_I LTR Gypsy 4506 5258 -1338 8 669 6510 4 0 1 chrUextra 11047995 11048748 -17955908 + R2_DM LINE R2 2176 2927 -680 8 669 2982 6 3 0 chrUextra 11048848 11049199 -17955457 + NOMAD_LTR LTR Gypsy 167 518 0 8 669 21 36 0 0 chrUextra 11049199 11049227 -17955429 + AT_rich Low_complexity Low_complexity 1 28 0 8 669 425 20 0 0 chrUextra 11049550 11049601 -17955055 + Baggins1 LINE LOA 5346 5396 -57 8 669 744 71 0 0 chrUextra 11050168 11050267 -17954389 + (GAGAA)n Simple_repeat Simple_repeat 2 100 0 8 669 1557 17 0 0 chrUextra 11050267 11050447 -17954209 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 8 669 2972 188 23 7 chrUextra 11050567 11051300 -17953356 - SAR_DM Satellite Satellite -396 1076 332 8 669 3319 181 7 8 chrUextra 11051408 11052159 -17952497 + SAR_DM Satellite Satellite 230 979 -493 8 669 5819 11 4 0 chrUextra 11052260 11052849 -17951807 - DM176_I LTR Gypsy -5303 1117 529 8 669 181 30 29 57 chrUextra 11052849 11052884 -17951772 + (TTA)n Simple_repeat Simple_repeat 3 36 0 8 669 5819 11 4 0 chrUextra 11052884 11053013 -17951643 - DM176_I LTR Gypsy -5892 528 397 8 669 1411 12 0 0 chrUextra 11053113 11053282 -17951374 + R1_DM LINE R1 4898 5066 -290 8 669 897 53 0 0 chrUextra 11053279 11053393 -17951263 + R1_DM LINE R1 5243 5356 0 8 669 3159 65 5 5 chrUextra 11053426 11053861 -17950795 + R1_DM LINE R1 1 435 -4921 8 669 718 160 0 4 chrUextra 11054004 11054242 -17950414 - SAR_DM Satellite Satellite -801 237 1 8 669 1936 172 28 17 chrUextra 11054253 11054719 -17949937 - SAR_DM Satellite Satellite -396 1076 606 8 669 21 89 0 0 chrUextra 11055335 11055391 -17949265 + AT_rich Low_complexity Low_complexity 1 56 0 8 669 1345 0 0 12 chrUextra 11055410 11055572 -17949084 - SSU-rRNA_Dme rRNA rRNA 0 1995 1836 8 669 943 200 64 0 chrUextra 11056048 11056298 -17948358 + DNAREP1_DM LINE Penelope 1 266 -328 8 669 1620 4 0 2 chrUextra 11056525 11057278 -17947378 + (ATAAG)n Simple_repeat Simple_repeat 1 751 0 8 669 1055 8 0 0 chrUextra 11057380 11057506 -17947150 - ROO_LTR LTR Pao -302 126 1 8 669 4640 34 0 6 chrUextra 11057506 11058131 -17946525 - ROO_I LTR Pao 0 8256 7636 8 669 3160 183 16 9 chrUextra 11058231 11058981 -17945675 - SAR_DM Satellite Satellite -436 1036 282 8 669 3443 169 16 8 chrUextra 11059085 11059837 -17944819 - SAR_DM Satellite Satellite -464 1008 251 8 669 1522 74 5 31 chrUextra 11060466 11060690 -17943966 - Baggins1 LINE LOA -262 5191 4974 8 669 2310 80 3 6 chrUextra 11060790 11061131 -17943525 - HOBO DNA hAT -2347 669 330 8 669 1973 112 189 17 chrUextra 11061108 11061515 -17943141 - PROTOP DNA P -4003 477 1 8 669 230 94 0 0 chrUextra 11061515 11061543 -17943113 - HOBO DNA hAT -2704 312 285 8 669 2541 101 9 30 chrUextra 11061653 11062396 -17942260 - DMSAT6 Satellite Satellite -64 727 1 8 669 6452 1 0 1 chrUextra 11062496 11063249 -17941407 - R2_DM LINE R2 -2409 1198 447 8 669 6029 29 0 0 chrUextra 11063349 11064102 -17940554 + MDG1_I LTR Gypsy 3223 3975 -2621 8 669 6047 25 3 3 chrUextra 11064202 11064955 -17939701 - R1_DM LINE R1 -303 5053 4301 8 669 6555 1 0 0 chrUextra 11065055 11065808 -17938848 + BS2 LINE Jockey 3687 4439 -282 8 669 5639 45 43 1 chrUextra 11065908 11066660 -17937996 - R1_DM LINE R1 -3928 1428 646 8 669 22 56 0 0 chrUextra 11066810 11066846 -17937810 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 840 9 0 35 chrUextra 11066872 11066985 -17937671 + NTS_DM Other Other 25 133 -107 8 669 1252 18 0 6 chrUextra 11066985 11067150 -17937506 + NTS_DM Other Other 38 201 -39 8 669 870 9 0 27 chrUextra 11067202 11067314 -17937342 + NTS_DM Other Other 25 133 -107 8 669 1252 18 0 6 chrUextra 11067314 11067479 -17937177 + NTS_DM Other Other 38 201 -39 8 669 351 24 0 0 chrUextra 11067614 11067656 -17937000 - LSU-rRNA_Dme rRNA rRNA -1219 2681 2640 8 669 531 0 0 0 chrUextra 11067654 11067715 -17936941 - R1_DM LINE R1 0 5356 5296 8 669 5736 1 0 0 chrUextra 11067712 11068367 -17936289 - LSU-rRNA_Dme rRNA rRNA -1249 2651 1997 8 669 4711 76 74 4 chrUextra 11068467 11069220 -17935436 + IDEFIX_I LTR Gypsy 4038 4843 -785 8 669 6318 17 7 0 chrUextra 11069320 11070073 -17934583 - Gypsy6_I LTR Gypsy -5440 1572 815 8 669 3333 179 7 8 chrUextra 11070173 11070924 -17933732 - SAR_DM Satellite Satellite -493 979 230 8 669 2521 116 39 2 chrUextra 11071026 11071533 -17933123 + TART_B1 LINE telomeric 1880 2405 -8249 8 669 227 32 0 0 chrUextra 11071533 11071564 -17933092 + PROTOP_B DNA P 1 31 -1122 8 669 1554 10 0 69 chrUextra 11071562 11071779 -17932877 + PROTOP_A DNA P 728 929 -176 8 669 2244 18 4 4 chrUextra 11071879 11072156 -17932500 - ACCORD2_I LTR Gypsy -6094 1118 842 8 669 3735 8 40 2 chrUextra 11072154 11072632 -17932024 - ACCORD2_I LTR Gypsy -2904 4308 3813 8 669 632 193 7 14 chrUextra 11072771 11072913 -17931743 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 477 217 8 16 chrUextra 11073046 11073168 -17931488 - HETRP_DM Satellite Satellite -203 1669 1549 8 669 192 40 0 0 chrUextra 11073168 11073193 -17931463 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 669 655 186 7 14 chrUextra 11073324 11073466 -17931190 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 6402 1 0 0 chrUextra 11073585 11074338 -17930318 + STALKER4_I LTR Gypsy 5035 5787 -743 8 669 6568 1 0 0 chrUextra 11074438 11075190 -17929466 + MICROPIA_I LTR Gypsy 2630 3381 -1095 8 669 6199 1 1 0 chrUextra 11075290 11076002 -17928654 + LSU-rRNA_Dme rRNA rRNA 1926 2638 -1262 8 669 356 23 0 0 chrUextra 11075999 11076042 -17928614 + R1_DM LINE R1 4840 4882 -474 8 669 5933 29 12 0 chrUextra 11076144 11076894 -17927762 - MDG1_I LTR Gypsy -756 5840 5082 8 669 6348 13 0 0 chrUextra 11076994 11077746 -17926910 + G_DM LINE Jockey 2754 3505 -841 8 669 2876 207 14 23 chrUextra 11077850 11078598 -17926058 - SAR_DM Satellite Satellite -577 741 1 8 669 5896 15 19 1 chrUextra 11078698 11079450 -17925206 + Invader3_I LTR Gypsy 4071 4835 -53 8 669 6473 1 0 0 chrUextra 11079550 11080302 -17924354 + ACCORD2_I LTR Gypsy 576 1327 -5885 8 669 6421 0 0 0 chrUextra 11080402 11081154 -17923502 - DMRT1B LINE R1 -4230 953 202 8 669 21 57 0 0 chrUextra 11081405 11081440 -17923216 + AT_rich Low_complexity Low_complexity 1 35 0 8 669 1985 8 0 0 chrUextra 11081440 11081680 -17922976 + ALUII_DM Unknown Unknown 1 240 0 8 669 373 56 19 0 chrUextra 11082124 11082178 -17922478 - DNAREP1_DM LINE Penelope -532 62 8 8 669 559 149 15 7 chrUextra 11082250 11082385 -17922271 + PROTOP_B DNA P 313 448 -705 8 669 328 87 0 0 chrUextra 11082424 11082470 -17922186 - DNAREP1_DM LINE Penelope -199 395 350 8 669 396 167 62 0 chrUextra 11082499 11082595 -17922061 - DNAREP1_DM LINE Penelope -317 277 176 8 669 27 0 0 0 chrUextra 11082696 11082723 -17921933 + AT_rich Low_complexity Low_complexity 1 27 0 8 669 410 63 32 0 chrUextra 11082795 11082858 -17921798 + IDEFIX_LTR LTR Gypsy 3 67 -527 8 669 5262 64 23 3 chrUextra 11082973 11083710 -17920946 + R1_DM LINE R1 1 752 -4604 8 669 2490 79 19 18 chrUextra 11083826 11084562 -17920094 - DMSAT6 Satellite Satellite 0 737 1 8 669 6581 1 1 0 chrUextra 11085514 11086266 -17918390 - LSU-rRNA_Dme rRNA rRNA -305 3595 2843 8 669 34 24 0 0 chrUextra 11086687 11086728 -17917928 + AT_rich Low_complexity Low_complexity 1 41 0 8 669 21 95 0 0 chrUextra 11086941 11087004 -17917652 + AT_rich Low_complexity Low_complexity 1 63 0 8 669 890 0 0 0 chrUextra 11087016 11087118 -17917538 + LSU-rRNA_Dme rRNA rRNA 1 102 -3798 8 669 2644 192 57 16 chrUextra 11087218 11087968 -17916688 - SAR_DM Satellite Satellite -267 1205 425 8 669 315 0 0 0 chrUextra 11088071 11088107 -17916549 - NTS_DM Other Other -204 36 1 8 669 1861 0 17 13 chrUextra 11088107 11088346 -17916310 - NTS_DM Other Other 0 240 1 8 669 1252 18 0 6 chrUextra 11088428 11088593 -17916063 - NTS_DM Other Other -39 201 38 8 669 870 9 0 27 chrUextra 11088593 11088705 -17915951 - NTS_DM Other Other -107 133 25 8 669 22 56 0 0 chrUextra 11088731 11088767 -17915889 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 255 125 0 0 chrUextra 11088780 11088820 -17915836 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 669 2967 183 29 17 chrUextra 11088925 11089672 -17914984 + SAR_DM Satellite Satellite 1 755 -396 8 669 4399 43 15 13 chrUextra 11089774 11090459 -17914197 - PROTOP DNA P -464 641 1 8 669 1006 53 118 7 chrUextra 11090626 11090779 -17913877 - PROTOP_A DNA P -935 170 1 8 669 451 153 70 12 chrUextra 11090897 11091038 -17913618 - TAHRE LINE telomeric -3988 10489 10371 8 669 664 260 103 19 chrUextra 11091032 11091295 -17913361 - TAHRE LINE telomeric -372 10091 9807 8 669 366 184 13 0 chrUextra 11091302 11091378 -17913278 - Gypsy12A_LTR LTR Gypsy -18 2262 2186 8 669 6448 1 1 0 chrUextra 11091478 11092230 -17912426 + DM176_I LTR Gypsy 2242 2994 -3426 8 669 6182 23 5 0 chrUextra 11092330 11093082 -17911574 - R1_DM LINE R1 -750 4606 3851 8 669 832 9 9 27 chrUextra 11093224 11093335 -17911321 + NTS_DM Other Other 25 133 -107 8 669 817 0 0 0 chrUextra 11093335 11093431 -17911225 + NTS_DM Other Other 38 133 -107 8 669 1408 20 20 20 chrUextra 11093431 11093634 -17911022 + NTS_DM Other Other 38 240 0 8 669 1734 21 17 17 chrUextra 11093634 11093874 -17910782 + NTS_DM Other Other 1 240 0 8 669 458 33 17 0 chrUextra 11093874 11093934 -17910722 + NTS_DM Other Other 1 61 -179 8 669 2540 195 13 19 chrUextra 11094034 11094786 -17909870 + SAR_DM Satellite Satellite 1 747 -836 8 669 4686 9 6 13 chrUextra 11095738 11096373 -17908283 + STALKER4_I LTR Gypsy 5900 6530 0 8 669 919 8 8 0 chrUextra 11096373 11096490 -17908166 + STALKER4_LTR LTR Gypsy 1 118 -284 8 669 6136 19 0 0 chrUextra 11096606 11097342 -17907314 - R1_DM LINE R1 -2953 2403 1668 8 669 5564 54 1 9 chrUextra 11097442 11098188 -17906468 - BATUMI_I LTR Pao -3888 4075 3336 8 669 2942 160 139 11 chrUextra 11098295 11099045 -17905611 - TART LINE telomeric -4606 9871 9026 8 669 6336 1 0 0 chrUextra 11099149 11099869 -17904787 - SSU-rRNA_Dme rRNA rRNA -1275 720 1 8 669 1727 10 0 0 chrUextra 11099998 11100205 -17904451 - MICROPIA_LTR LTR Gypsy -38 438 232 8 669 1988 4 0 0 chrUextra 11100234 11100466 -17904190 - MICROPIA_LTR LTR Gypsy -244 232 1 8 669 2260 14 0 3 chrUextra 11100466 11100750 -17903906 - MICROPIA_I LTR Gypsy 0 4476 4194 8 669 2945 182 18 19 chrUextra 11100852 11101586 -17903070 + SAR_DM Satellite Satellite 387 1119 -353 8 669 306 210 10 20 chrUextra 11101500 11101602 -17903054 - XDMR_DM Unknown Unknown 0 360 260 8 669 6520 1 0 0 chrUextra 11101702 11102454 -17902202 + DOC LINE Jockey 3844 4595 -130 8 669 6381 4 3 3 chrUextra 11102554 11103306 -17901350 - LSU-rRNA_Dme rRNA rRNA -2248 1652 901 8 669 3060 181 22 30 chrUextra 11103406 11104158 -17900498 - SAR_DM Satellite Satellite -1087 746 1 8 669 729 127 8 0 chrUextra 11104258 11104384 -17900272 - ARS406_DM Unknown Unknown -226 127 1 8 669 3059 181 10 11 chrUextra 11104288 11105009 -17899647 + SAR_DM Satellite Satellite 192 911 -561 8 669 266 347 16 28 chrUextra 11105563 11105854 -17898802 - Gypsy3_I LTR Gypsy -5228 1784 1242 8 669 2929 202 17 27 chrUextra 11105964 11106714 -17897942 - SAR_DM Satellite Satellite -587 742 1 8 669 6425 1 1 0 chrUextra 11106814 11107566 -17897090 - LSU-rRNA_Dme rRNA rRNA -2657 1243 491 8 669 478 286 27 27 chrUextra 11108098 11108396 -17896260 + DM176_I LTR Gypsy 1831 2128 -4292 8 669 365 0 20 20 chrUextra 11108368 11108418 -17896238 - TLD3 Unknown Unknown -3 169 120 8 669 3059 169 13 23 chrUextra 11108518 11109270 -17895386 - SAR_DM Satellite Satellite -353 1119 375 8 669 6191 12 4 1 chrUextra 11109370 11110122 -17894534 - R1_DM LINE R1 -1268 4088 3335 8 669 4055 0 2 2 chrUextra 11110222 11110701 -17893955 + FW_DM LINE Jockey 4210 4688 -4 8 669 2369 0 0 0 chrUextra 11110700 11110974 -17893682 - DOC LINE Jockey -1928 2797 2524 8 669 388 78 0 0 chrUextra 11111074 11111125 -17893531 - HETRP_DM Satellite Satellite -293 1579 1529 8 669 662 200 6 19 chrUextra 11111249 11111407 -17893249 - HETRP_DM Satellite Satellite -188 1684 1529 8 669 491 208 8 16 chrUextra 11111576 11111698 -17892958 - HETRP_DM Satellite Satellite -203 1669 1549 8 669 210 37 0 0 chrUextra 11111698 11111725 -17892931 + (TC)n Simple_repeat Simple_repeat 2 28 0 8 669 4083 2 0 0 chrUextra 11111926 11112390 -17892266 - SSU-rRNA_Dme rRNA rRNA -1531 464 1 8 669 32 0 0 0 chrUextra 11112522 11112554 -17892102 + AT_rich Low_complexity Low_complexity 1 32 0 8 669 21 0 0 0 chrUextra 11113367 11113388 -17891268 + AT_rich Low_complexity Low_complexity 1 21 0 8 669 807 63 0 0 chrUextra 11113419 11113530 -17891126 + Gypsy10_LTR LTR Gypsy 1 111 -253 8 669 914 72 5 16 chrUextra 11113645 11114382 -17890274 + RSP Satellite Satellite 1 729 0 8 669 2772 179 68 12 chrUextra 11114482 11115202 -17889454 + SAR_DM Satellite Satellite 253 1012 -460 8 669 1080 24 24 24 chrUextra 11115334 11115502 -17889154 + NTS_DM Other Other 73 240 0 8 669 1850 4 17 13 chrUextra 11115502 11115741 -17888915 + NTS_DM Other Other 1 240 0 8 669 1861 0 17 13 chrUextra 11115741 11115980 -17888676 + NTS_DM Other Other 1 240 0 8 669 861 0 19 0 chrUextra 11115980 11116086 -17888570 + NTS_DM Other Other 1 108 -132 8 669 5609 47 8 0 chrUextra 11116186 11116938 -17887718 + IDEFIX_I LTR Gypsy 83 840 -4788 8 669 6625 0 0 0 chrUextra 11117038 11117790 -17886866 + HMSBEAGLE_I LTR Gypsy 1156 1907 -4622 8 669 6059 12 3 5 chrUextra 11117890 11118642 -17886014 - STALKER4_I LTR Gypsy -4594 1936 1187 8 669 3179 228 21 29 chrUextra 11118742 11119772 -17884884 + SAR_DM Satellite Satellite 1 1021 -262 8 669 333 213 21 0 chrUextra 11119698 11119792 -17884864 - XDMR_DM Unknown Unknown -8 352 257 8 669 465 205 8 0 chrUextra 11119790 11119907 -17884749 - ARS406_DM Unknown Unknown -235 118 1 8 669 978 198 48 18 chrUextra 11119802 11120302 -17884354 + SAR_DM Satellite Satellite 1 514 -680 8 669 2690 177 10 8 chrUextra 11120446 11121067 -17883589 - SAR_DM Satellite Satellite -558 914 293 8 669 520 142 18 0 chrUextra 11121079 11121192 -17883464 - SAR_DM Satellite Satellite -678 794 680 8 669 4115 32 262 17 chrUextra 11121298 11122000 -17882656 + MDG1_I LTR Gypsy 5723 6596 0 8 669 231 88 0 0 chrUextra 11122016 11122050 -17882606 + (TAA)n Simple_repeat Simple_repeat 3 36 0 8 669 27 29 0 0 chrUextra 11122204 11122238 -17882418 + AT_rich Low_complexity Low_complexity 1 34 0 8 669 752 37 0 115 chrUextra 11122561 11122683 -17881973 + Baggins1 LINE LOA 5346 5453 0 8 669 4858 88 12 4 chrUextra 11123002 11123754 -17880902 - DM297_I LTR Gypsy -3085 3082 2325 8 669 3039 166 47 12 chrUextra 11123860 11124586 -17880070 + SAR_DM Satellite Satellite 326 1076 -396 8 669 252 0 0 0 chrUextra 11125314 11125343 -17879313 - SSU-rRNA_Dme rRNA rRNA 0 1995 1967 8 669 951 0 0 0 chrUextra 11125350 11125458 -17879198 - SSU-rRNA_Dme rRNA rRNA -347 1648 1541 8 669 1401 287 24 14 chrUextra 11125664 11126309 -17878347 + ROVER-I_DM LTR Gypsy 341 1346 -5238 8 669 1013 185 48 9 chrUextra 11126412 11127095 -17877561 + SAR_DM Satellite Satellite 1 709 -680 8 669 6522 1 0 0 chrUextra 11127262 11128014 -17876642 - Invader3_I LTR Gypsy -811 4077 3326 8 669 1132 0 0 0 chrUextra 11128114 11128250 -17876406 - ROVER-LTR_DM LTR Gypsy -231 136 1 8 669 3368 5 7 7 chrUextra 11128256 11128670 -17875986 - DM297_LTR LTR Gypsy 0 414 1 8 669 1592 15 0 0 chrUextra 11128670 11128866 -17875790 - DM297_I LTR Gypsy 0 6167 5972 8 669 1305 233 2 8 chrUextra 11128966 11129273 -17875383 + GTWIN_I LTR Gypsy 6153 6421 0 8 669 639 240 156 46 chrUextra 11129276 11129604 -17875052 + GTWIN_LTR LTR Gypsy 42 405 -90 8 669 5531 47 39 1 chrUextra 11129818 11130570 -17874086 - IDEFIX_I LTR Gypsy -2989 2639 1860 8 669 1491 19 10 5 chrUextra 11130670 11130878 -17873778 - DOC5_DM LINE Jockey -495 4187 3979 8 669 541 137 11 0 chrUextra 11130897 11130992 -17873664 - DMCR1A LINE CR1 -4010 460 365 8 669 558 127 36 0 chrUextra 11130987 11131097 -17873559 - DMCR1A LINE CR1 -4350 120 7 8 669 235 146 0 0 chrUextra 11131164 11131205 -17873451 + DMCR1A LINE CR1 744 784 -3686 8 669 252 208 0 0 chrUextra 11131343 11131396 -17873260 + NOMAD_I LTR Gypsy 6520 6572 0 8 669 4048 96 171 5 chrUextra 11132374 11133126 -17871530 - TART LINE telomeric -3844 10633 9757 8 669 4671 21 3 2 chrUextra 11133226 11133805 -17870851 + R1_DM LINE R1 3670 4249 -1107 8 669 1250 47 58 0 chrUextra 11133800 11133972 -17870684 + R1_DM LINE R1 458 639 -4717 8 669 2263 95 22 39 chrUextra 11134084 11134830 -17869826 + DMSAT6 Satellite Satellite 1 732 -61 8 669 1609 37 5 14 chrUextra 11134930 11135150 -17869506 + IDEFIX_LTR LTR Gypsy 377 594 0 8 669 25 0 0 0 chrUextra 11135341 11135366 -17869290 + AT_rich Low_complexity Low_complexity 1 25 0 8 669 22 56 0 0 chrUextra 11135404 11135440 -17869216 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 1063 44 0 0 chrUextra 11135545 11135682 -17868974 + IDEFIX_I LTR Gypsy 1 137 -5491 8 669 1861 0 17 13 chrUextra 11135815 11136054 -17868602 + NTS_DM Other Other 1 240 0 8 669 1847 0 17 13 chrUextra 11136056 11136294 -17868362 + NTS_DM Other Other 2 240 0 8 669 1766 8 21 17 chrUextra 11136294 11136533 -17868123 + NTS_DM Other Other 1 240 0 8 669 2010 19 15 4 chrUextra 11136637 11137064 -17867592 + MDG3_I LTR Gypsy 4488 4986 0 8 669 2065 30 8 0 chrUextra 11137064 11137329 -17867327 + MDG3_LTR LTR Gypsy 1 267 0 8 669 493 0 0 0 chrUextra 11137328 11137386 -17867270 + MDG3_I LTR Gypsy 1 58 -4928 8 669 4240 113 105 0 chrUextra 11137495 11138221 -17866435 + TART_B1 LINE telomeric 5536 6337 -4317 8 669 6064 32 1 1 chrUextra 11138338 11139090 -17865566 - R1_DM LINE R1 -3377 1979 1228 8 669 2819 54 0 10 chrUextra 11139190 11139580 -17865076 + PROTOP_A DNA P 720 1105 0 8 669 759 126 154 0 chrUextra 11139580 11139723 -17864933 - DNAREP1_DM LINE Penelope -20 574 410 8 669 479 100 0 0 chrUextra 11139717 11139787 -17864869 - DNAREP1_DM LINE Penelope -490 104 35 8 669 1438 15 20 20 chrUextra 11140068 11140271 -17864385 + NTS_DM Other Other 38 240 0 8 669 1731 21 17 17 chrUextra 11140271 11140511 -17864145 + NTS_DM Other Other 1 240 0 8 669 1756 17 17 17 chrUextra 11140511 11140751 -17863905 + NTS_DM Other Other 1 240 0 8 669 358 23 0 0 chrUextra 11140751 11140794 -17863862 + NTS_DM Other Other 1 43 -197 8 83 3928 53 78 66 chrUextra 11140894 11141646 -17863010 - ROO_I LTR Pao -6874 1382 200 8 670 6300 1 3 0 chrUextra 11141746 11142485 -17862171 - R1_DM LINE R1 -1759 3597 2857 8 670 1734 21 17 17 chrUextra 11142622 11142862 -17861794 + NTS_DM Other Other 1 240 0 8 670 1734 21 17 17 chrUextra 11142862 11143102 -17861554 + NTS_DM Other Other 1 240 0 8 670 1828 8 17 13 chrUextra 11143102 11143341 -17861315 + NTS_DM Other Other 1 240 0 8 670 2819 65 7 17 chrUextra 11143624 11144029 -17860627 - Baggins1 LINE LOA -262 5191 4791 8 670 2465 79 38 14 chrUextra 11144302 11145044 -17859612 - DMSAT6 Satellite Satellite -50 759 1 8 670 2302 107 8 39 chrUextra 11145154 11145906 -17858750 + DMSAT6 Satellite Satellite 1 728 -33 8 670 1102 0 14 7 chrUextra 11146008 11146148 -17858508 + LSU-rRNA_Dme rRNA rRNA 1648 1788 -2112 8 670 4939 2 0 0 chrUextra 11146192 11146758 -17857898 + LSU-rRNA_Dme rRNA rRNA 1788 2353 -1547 8 670 6544 1 0 0 chrUextra 11146858 11147610 -17857046 + DMRT1A LINE R1 3200 3951 -1232 8 670 2946 35 0 22 chrUextra 11147710 11148115 -17856541 - TART LINE telomeric -13452 1025 630 8 670 1760 132 11 17 chrUextra 11148114 11148462 -17856194 - TAHRE LINE telomeric -12 10451 10106 8 670 6543 1 0 0 chrUextra 11148562 11149314 -17855342 - MAX_I LTR Pao -4427 3487 2736 8 670 3100 179 10 12 chrUextra 11149415 11150146 -17854510 - SAR_DM Satellite Satellite -549 923 195 8 670 636 125 0 0 chrUextra 11150053 11150165 -17854491 + ARS406_DM Unknown Unknown 1 112 -241 8 670 6512 1 0 3 chrUextra 11150268 11151018 -17853638 + SSU-rRNA_Dme rRNA rRNA 154 901 -1094 8 670 1100 291 7 7 chrUextra 11151441 11151869 -17852787 + Gypsy9_I LTR Gypsy 882 1629 -5383 8 670 28 48 0 0 chrUextra 11152288 11152330 -17852326 + AT_rich Low_complexity Low_complexity 1 42 0 8 670 30 27 0 0 chrUextra 11152684 11152721 -17851935 + AT_rich Low_complexity Low_complexity 1 37 0 8 670 799 30 0 10 chrUextra 11152822 11152922 -17851734 + R1_DM LINE R1 5258 5356 0 8 670 4447 62 24 3 chrUextra 11152957 11153574 -17851082 + R1_DM LINE R1 2 631 -4725 8 670 6366 12 1 0 chrUextra 11153674 11154426 -17850230 - DM1731_I LTR Copia -2545 1431 679 8 670 3161 173 25 13 chrUextra 11154526 11155275 -17849381 + SAR_DM Satellite Satellite 298 1055 -417 8 670 881 54 0 0 chrUextra 11155379 11155491 -17849165 + PROTOP DNA P 4369 4480 0 8 670 26 30 0 0 chrUextra 11155850 11155883 -17848773 + AT_rich Low_complexity Low_complexity 1 33 0 8 670 23 68 0 0 chrUextra 11155929 11155973 -17848683 + AT_rich Low_complexity Low_complexity 1 44 0 8 670 21 89 0 0 chrUextra 11156011 11156067 -17848589 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 5046 2 2 2 chrUextra 11156230 11156813 -17847843 - R2_DM LINE R2 -3023 584 2 8 670 1487 6 0 0 chrUextra 11156810 11156982 -17847674 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2410 8 670 5553 0 2 0 chrUextra 11157082 11157716 -17846940 + SSU-rRNA_Dme rRNA rRNA 1361 1995 0 8 670 4765 13 60 1 chrUextra 11157934 11158686 -17845970 - R1_DM LINE R1 -1319 4037 3242 8 670 684 179 54 0 chrUextra 11158818 11158986 -17845670 - SAR_DM Satellite Satellite -749 723 547 8 670 2168 183 15 15 chrUextra 11159001 11159538 -17845118 - SAR_DM Satellite Satellite -396 1076 540 8 670 6430 1 3 3 chrUextra 11159638 11160390 -17844266 - LSU-rRNA_Dme rRNA rRNA -2249 1651 900 8 670 450 334 39 36 chrUextra 11160491 11160995 -17843661 - GTWIN_I LTR Gypsy -2937 3484 2640 8 670 1504 28 19 0 chrUextra 11160995 11161209 -17843447 - TLD2 Unknown Unknown 0 218 1 8 670 450 334 39 36 chrUextra 11161209 11161235 -17843421 - GTWIN_I LTR Gypsy -2937 2639 2593 8 670 3693 30 100 3 chrUextra 11161342 11161942 -17842714 + R1_DM LINE R1 4699 5356 0 8 670 820 69 9 0 chrUextra 11161975 11162091 -17842565 + R1_DM LINE R1 1 117 -5239 8 670 3528 0 5 0 chrUextra 11162193 11162632 -17842024 + ROO_I LTR Pao 7816 8256 0 8 670 2744 3 0 0 chrUextra 11162632 11162944 -17841712 + ROO_LTR LTR Pao 1 312 -116 8 670 919 32 0 8 chrUextra 11163044 11163171 -17841485 - NTS_DM Other Other -77 163 38 8 670 870 9 0 27 chrUextra 11163171 11163283 -17841373 - NTS_DM Other Other -107 133 25 8 670 1252 18 0 6 chrUextra 11163335 11163500 -17841156 - NTS_DM Other Other -39 201 38 8 670 870 9 0 27 chrUextra 11163500 11163612 -17841044 - NTS_DM Other Other -107 133 25 8 670 22 56 0 0 chrUextra 11163638 11163674 -17840982 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 265 173 0 19 chrUextra 11163687 11163740 -17840916 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2569 8 670 4071 10 2 2 chrUextra 11163895 11164386 -17840270 + R1_DM LINE R1 3397 3887 -1469 8 670 2067 28 0 0 chrUextra 11164389 11164644 -17840012 + R1_DM LINE R1 4143 4397 -959 8 670 6133 8 5 0 chrUextra 11164746 11165497 -17839159 + DM297_I LTR Gypsy 3149 3903 -2264 8 670 1326 71 0 0 chrUextra 11165597 11165779 -17838877 - ROOA_I LTR Pao -2248 4601 4420 8 670 4303 42 29 12 chrUextra 11165769 11166348 -17838308 - ROOA_I LTR Pao -2581 4268 3680 8 670 6386 0 1 1 chrUextra 11166449 11167199 -17837457 + R1_DM LINE R1 2392 3141 -2215 8 670 6500 5 0 0 chrUextra 11167299 11168050 -17836606 + IVK_DM LINE I 3912 4662 -740 8 670 22 56 0 0 chrUextra 11168326 11168362 -17836294 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 3084 28 0 8 chrUextra 11168511 11168901 -17835755 + G2_DM LINE Jockey 1411 1797 -1305 8 670 641 172 68 68 chrUextra 11169853 11170059 -17834597 - DNAREP1_DM LINE Penelope -262 332 83 8 670 489 33 0 0 chrUextra 11170148 11170209 -17834447 - DNAREP1_DM LINE Penelope -532 62 2 8 670 6355 11 0 1 chrUextra 11170703 11171454 -17833202 + BLOOD_I LTR Gypsy 3933 4682 -1931 8 670 6390 0 1 0 chrUextra 11171554 11172305 -17832351 + ROO_I LTR Pao 7314 8065 -191 8 670 246 150 0 0 chrUextra 11172405 11172445 -17832211 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 22 56 0 0 chrUextra 11172450 11172486 -17832170 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 5224 2 2 0 chrUextra 11172558 11173156 -17831500 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 8 670 6482 0 0 0 chrUextra 11173256 11174007 -17830649 + Invader2_I LTR Gypsy 861 1611 -2981 8 670 5196 45 53 33 chrUextra 11174107 11174858 -17829798 - DIVER2_I LTR Pao -2336 1811 1046 8 670 6420 9 0 0 chrUextra 11174958 11175709 -17828947 - Gypsy4_I LTR Gypsy -1573 4715 3965 8 670 363 145 0 80 chrUextra 11175826 11175901 -17828755 - HETRP_DM Satellite Satellite -286 1586 1518 8 670 655 186 7 14 chrUextra 11176018 11176160 -17828496 - HETRP_DM Satellite Satellite -203 1669 1529 8 670 477 217 8 16 chrUextra 11176293 11176415 -17828241 - HETRP_DM Satellite Satellite -203 1669 1549 8 670 192 40 0 0 chrUextra 11176415 11176440 -17828216 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 670 7768 151 38 55 chrUextra 11176660 11178261 -17826395 + R1_DM LINE R1 3139 4712 -644 8 670 6459 1 1 0 chrUextra 11178362 11179113 -17825543 + FW_DM LINE Jockey 2885 3636 -1056 8 670 957 57 0 0 chrUextra 11179298 11179438 -17825218 - G4_DM LINE Jockey 0 3856 3717 8 670 1140 21 0 0 chrUextra 11179436 11179576 -17825080 - G4_DM LINE Jockey -267 3589 3450 8 670 719 281 3 22 chrUextra 11179596 11179964 -17824692 + DM297_I LTR Gypsy 1891 2251 -3916 8 670 6525 0 0 0 chrUextra 11180064 11180815 -17823841 + DOC LINE Jockey 2342 3092 -1633 8 670 1412 307 19 52 chrUextra 11180919 11181645 -17823011 - MICROPIA_I LTR Gypsy -2662 1814 1113 8 670 51 31 0 0 chrUextra 11181874 11181939 -17822717 + AT_rich Low_complexity Low_complexity 1 65 0 8 670 22 35 0 0 chrUextra 11182115 11182144 -17822512 + AT_rich Low_complexity Low_complexity 1 29 0 8 670 224 185 31 0 chrUextra 11182370 11182435 -17822221 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 670 749 18 35 26 chrUextra 11182617 11182733 -17821923 + NTS_DM Other Other 124 240 0 8 670 1820 4 17 17 chrUextra 11182733 11182973 -17821683 + NTS_DM Other Other 1 240 0 8 670 1778 8 17 17 chrUextra 11182973 11183213 -17821443 + NTS_DM Other Other 1 240 0 8 670 1287 7 0 0 chrUextra 11183213 11183368 -17821288 + NTS_DM Other Other 1 155 -85 8 670 6197 19 15 0 chrUextra 11183468 11184219 -17820437 - R1_DM LINE R1 -2943 2413 1652 8 670 2275 108 7 43 chrUextra 11184319 11185066 -17819590 - DMSAT6 Satellite Satellite -68 719 1 8 670 6461 1 1 3 chrUextra 11185170 11185921 -17818735 + SSU-rRNA_Dme rRNA rRNA 679 1428 -567 8 670 262 250 12 23 chrUextra 11186404 11186490 -17818166 + (CATA)n Simple_repeat Simple_repeat 1 85 0 8 670 25 48 0 46 chrUextra 11187084 11187149 -17817507 + AT_rich Low_complexity Low_complexity 1 62 0 8 670 1994 57 19 0 chrUextra 11187723 11187985 -17816671 + Baggins1 LINE LOA 1595 1861 -3592 8 670 3920 40 0 0 chrUextra 11187980 11188474 -17816182 + Baggins1 LINE LOA 4316 4809 -644 8 670 4491 14 2 0 chrUextra 11188574 11189115 -17815541 - NINJA_I LTR Pao -4805 1206 665 8 670 1821 0 0 0 chrUextra 11189115 11189325 -17815331 - ACCORD_LTR LTR Gypsy 0 558 349 8 670 3200 180 12 8 chrUextra 11190276 11191027 -17813629 + SAR_DM Satellite Satellite 230 983 -489 8 670 22 56 0 0 chrUextra 11191140 11191176 -17813480 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 255 125 0 0 chrUextra 11191189 11191229 -17813427 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 246 150 0 0 chrUextra 11191365 11191405 -17813251 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 246 150 0 0 chrUextra 11191457 11191497 -17813159 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 22 56 0 0 chrUextra 11191502 11191538 -17813118 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 2333 0 0 0 chrUextra 11191610 11191878 -17812778 - LSU-rRNA_Dme rRNA rRNA 0 3900 3633 8 670 6361 12 7 0 chrUextra 11191978 11192729 -17811927 + FW_DM LINE Jockey 3376 4131 -561 8 670 3597 72 30 24 chrUextra 11192829 11193560 -17811096 - PROTOP_A DNA P -65 1088 360 8 670 6171 21 1 0 chrUextra 11193680 11194431 -17810225 - FW_DM LINE Jockey -1732 2960 2209 8 670 1050 0 0 0 chrUextra 11194531 11194651 -17810005 + SSU-rRNA_Dme rRNA rRNA 1876 1995 0 8 670 986 156 27 14 chrUextra 11195390 11195611 -17809045 + SAR_DM Satellite Satellite 680 903 -569 8 670 657 53 53 0 chrUextra 11195526 11195621 -17809035 - ARS406_DM Unknown Unknown -164 189 90 8 670 1691 185 17 7 chrUextra 11195626 11196030 -17808626 + SAR_DM Satellite Satellite 496 903 -569 8 670 634 72 10 0 chrUextra 11196036 11196133 -17808523 - ARS406_DM Unknown Unknown -194 159 62 8 670 5405 0 0 38 chrUextra 11196302 11196984 -17807672 + LSU-rRNA_Dme rRNA rRNA 1 656 -3244 8 670 2866 53 3 0 chrUextra 11197461 11197835 -17806821 + Baggins1 LINE LOA 4791 5165 -288 8 670 802 20 0 10 chrUextra 11197935 11198038 -17806618 + NTS_DM Other Other 32 133 -107 8 670 1438 15 20 20 chrUextra 11198038 11198241 -17806415 + NTS_DM Other Other 38 240 0 8 670 1726 17 17 21 chrUextra 11198241 11198482 -17806174 + NTS_DM Other Other 1 240 0 8 670 1646 10 0 0 chrUextra 11198482 11198684 -17805972 + NTS_DM Other Other 1 202 -38 8 670 5948 5 15 15 chrUextra 11198786 11199537 -17805119 + MDG1_I LTR Gypsy 880 1630 -4966 8 670 6354 8 15 0 chrUextra 11199637 11200388 -17804268 - TAHRE LINE telomeric -61 10402 9641 8 670 6115 29 1 0 chrUextra 11200488 11201239 -17803417 + DMRT1B LINE R1 2949 3700 -1483 8 670 3205 178 19 9 chrUextra 11201339 11202088 -17802568 - SAR_DM Satellite Satellite -439 1033 278 8 670 826 62 13 65 chrUextra 11202190 11202344 -17802312 - Copia2_I LTR Copia -112 4050 3905 8 670 5020 16 12 0 chrUextra 11202336 11202941 -17801715 - Copia2_I LTR Copia -1572 2590 1979 8 670 21 89 0 0 chrUextra 11203088 11203144 -17801512 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 5428 0 2 3 chrUextra 11203163 11203792 -17800864 - SSU-rRNA_Dme rRNA rRNA 0 1995 1368 8 670 6456 1 1 3 chrUextra 11203892 11204643 -17800013 - SSU-rRNA_Dme rRNA rRNA -427 1568 819 8 670 2278 4 0 0 chrUextra 11205594 11205857 -17798799 - SSU-rRNA_Dme rRNA rRNA -1732 263 1 8 670 32 0 0 0 chrUextra 11205989 11206021 -17798635 + AT_rich Low_complexity Low_complexity 1 32 0 8 670 2927 170 11 14 chrUextra 11206445 11207196 -17797460 - SAR_DM Satellite Satellite -259 1213 195 8 670 5909 28 0 12 chrUextra 11207296 11208047 -17796609 + FW_DM LINE Jockey 1046 1787 -2905 8 670 688 188 87 12 chrUextra 11208147 11208319 -17796337 - HETA LINE telomeric -1866 4215 4031 8 670 22 56 0 0 chrUextra 11208473 11208509 -17796147 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 322 178 50 101 chrUextra 11208554 11208673 -17795983 + Copia_I LTR Copia 4401 4513 -80 8 670 6423 7 1 4 chrUextra 11208998 11209749 -17794907 - MICROPIA_I LTR Gypsy -721 3755 3007 8 670 6501 0 0 0 chrUextra 11209852 11210600 -17794056 + BARI_DM DNA Tc1 143 890 -838 8 670 6528 5 1 0 chrUextra 11210700 11211451 -17793205 + MICROPIA_I LTR Gypsy 1913 2664 -1812 8 670 2552 25 0 0 chrUextra 11211551 11211876 -17792780 + Invader2_I LTR Gypsy 2391 2715 -1877 8 670 3547 2 0 0 chrUextra 11211876 11212302 -17792354 - DOC LINE Jockey 0 4725 4300 8 670 5097 27 80 0 chrUextra 11212405 11213153 -17791503 + R1_DM LINE R1 4222 5029 -327 8 670 1016 146 22 0 chrUextra 11214108 11214320 -17790336 + DNAREP1_DM LINE Penelope 123 332 -262 8 670 795 103 145 6 chrUextra 11214328 11214494 -17790162 - PROTOP DNA P -566 3914 3726 8 670 1809 60 147 7 chrUextra 11214532 11214832 -17789824 - PROTOP DNA P -1006 3474 3133 8 670 3248 0 0 0 chrUextra 11214955 11215325 -17789331 + LSU-rRNA_Dme rRNA rRNA 3531 3900 0 8 670 22 56 0 0 chrUextra 11215397 11215433 -17789223 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 246 150 0 0 chrUextra 11215531 11215571 -17789085 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 670 246 150 0 0 chrUextra 11215623 11215663 -17788993 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 670 2470 81 19 18 chrUextra 11216659 11217408 -17787248 + DMSAT6 Satellite Satellite 1 750 -80 8 670 6186 7 0 0 chrUextra 11218359 11219110 -17785546 + DM297_I LTR Gypsy 1327 2077 -4090 8 670 761 100 8 8 chrUextra 11219210 11219341 -17785315 - ARS406_DM Unknown Unknown -222 131 1 8 670 2919 180 10 13 chrUextra 11219244 11219958 -17784698 + SAR_DM Satellite Satellite 192 903 -569 8 670 6102 19 0 0 chrUextra 11220061 11220812 -17783844 + STALKER4_I LTR Gypsy 3166 3916 -2614 8 670 6026 1 0 33 chrUextra 11220912 11221663 -17782993 - LSU-rRNA_Dme rRNA rRNA -3096 804 79 8 670 5517 60 40 37 chrUextra 11221763 11222514 -17782142 + CIRCE LINE Composite 118 870 -5486 8 670 1679 0 0 21 chrUextra 11222614 11222803 -17781853 - ACCORD2_LTR LTR Gypsy -30 185 1 8 670 332 58 0 161 chrUextra 11222803 11222865 -17781791 - Invader1_LTR LTR Gypsy -371 52 1 8 670 2748 101 59 5 chrUextra 11222865 11223291 -17781365 - Invader1_I LTR Gypsy 0 3186 2738 8 670 23 54 0 0 chrUextra 11223328 11223365 -17781291 + AT_rich Low_complexity Low_complexity 1 37 0 8 670 6786 3 0 0 chrUextra 11223469 11224216 -17780440 - DM176_I LTR Gypsy -2006 4414 3668 8 670 577 208 0 0 chrUextra 11224319 11224444 -17780212 - ROVER-I_DM LTR Gypsy -470 6114 5990 8 670 3273 161 36 5 chrUextra 11224479 11225064 -17779592 - ROVER-I_DM LTR Gypsy -1276 5308 4706 8 670 411 39 0 19 chrUextra 11225168 11225220 -17779436 + ARS406_DM Unknown Unknown 139 189 -164 8 670 3169 188 19 25 chrUextra 11225176 11225918 -17778738 - SAR_DM Satellite Satellite -614 737 1 8 670 62 26 0 0 chrUextra 11226045 11226121 -17778535 + AT_rich Low_complexity Low_complexity 1 76 0 8 670 298 178 439 8 chrUextra 11226267 11226397 -17778259 - PROTOP DNA P -4295 185 1 8 670 236 139 0 0 chrUextra 11226425 11226468 -17778188 + DM176_I LTR Gypsy 4724 4766 -1654 8 670 1031 121 19 0 chrUextra 11226475 11226632 -17778024 + DNAREP1_DM LINE Penelope 6 165 -429 8 670 375 161 123 0 chrUextra 11226688 11226769 -17777887 + DNAREP1_DM LINE Penelope 120 210 -384 8 670 3220 200 11 8 chrUextra 11226869 11227606 -17777050 - SAR_DM Satellite Satellite -495 977 239 8 670 362 83 33 0 chrUextra 11227560 11227620 -17777036 + ARS406_DM Unknown Unknown 1 62 -291 8 670 34 24 0 0 chrUextra 11227788 11227829 -17776827 + AT_rich Low_complexity Low_complexity 1 41 0 8 670 21 95 0 0 chrUextra 11228042 11228105 -17776551 + AT_rich Low_complexity Low_complexity 1 63 0 8 670 2858 0 3 71 chrUextra 11228117 11228471 -17776185 + LSU-rRNA_Dme rRNA rRNA 1 330 -3570 8 670 4438 2 0 0 chrUextra 11228571 11229048 -17775608 + LSU-rRNA_Dme rRNA rRNA 2161 2637 -1263 8 670 2458 18 0 14 chrUextra 11229034 11229322 -17775334 + R1_DM LINE R1 4813 5096 -260 8 670 3817 2 0 2 chrUextra 11229422 11229839 -17774817 - LSU-rRNA_Dme rRNA rRNA -845 3055 2640 8 670 3123 0 0 0 chrUextra 11229837 11230173 -17774483 - R1_DM LINE R1 0 5356 5021 8 670 6914 1 0 0 chrUextra 11230273 11231024 -17773632 - R1_DM LINE R1 -2836 2520 1770 8 670 277 253 90 50 chrUextra 11231442 11231542 -17773114 - DNAREP1_DM LINE Penelope -2 592 489 8 670 21 0 0 0 chrUextra 11231615 11231636 -17773020 + AT_rich Low_complexity Low_complexity 1 21 0 8 670 206 200 0 44 chrUextra 11231738 11231806 -17772850 + (TA)n Simple_repeat Simple_repeat 1 65 0 8 670 6638 7 5 3 chrUextra 11231975 11232726 -17771930 - R1_DM LINE R1 -942 4414 3662 8 670 2328 283 9 9 chrUextra 11232918 11233577 -17771079 + Gypsy_I LTR Gypsy 2375 3033 -3474 8 670 2665 84 12 17 chrUextra 11234528 11235279 -17769377 - DMSAT6 Satellite Satellite -66 746 1 8 670 5529 100 0 0 chrUextra 11235380 11236130 -17768526 + HETA LINE telomeric 2179 2928 -3153 8 670 21 95 0 0 chrUextra 11236419 11236482 -17768174 + AT_rich Low_complexity Low_complexity 1 63 0 8 670 4041 2 0 53 chrUextra 11236494 11236981 -17767675 + LSU-rRNA_Dme rRNA rRNA 1 461 -3439 8 670 6577 27 1 0 chrUextra 11237081 11237832 -17766824 - DMCR1A LINE CR1 -1702 2768 2017 8 670 235 213 0 0 chrUextra 11238025 11238072 -17766584 + (CAAAG)n Simple_repeat Simple_repeat 3 49 0 8 670 6835 1 1 0 chrUextra 11238784 11239534 -17765122 - R1_DM LINE R1 -3287 2069 1319 8 670 27 49 0 0 chrUextra 11239694 11239735 -17764921 + AT_rich Low_complexity Low_complexity 1 41 0 8 670 2017 179 209 38 chrUextra 11239746 11240384 -17764272 - TART LINE telomeric -3986 10491 9745 8 670 2565 103 12 21 chrUextra 11240485 11241236 -17763420 - DMSAT6 Satellite Satellite -81 743 1 8 670 3625 176 9 8 chrUextra 11241338 11242073 -17762583 - SAR_DM Satellite Satellite -411 1061 326 8 670 810 0 0 0 chrUextra 11242187 11242277 -17762379 + (CACAA)n Simple_repeat Simple_repeat 4 93 0 8 670 5262 8 6 8 chrUextra 11242317 11242938 -17761718 + DMRT1B LINE R1 403 1022 -4161 8 670 1117 293 44 33 chrUextra 11243038 11243699 -17760957 - BLOOD_I LTR Gypsy -4174 2439 1772 8 670 5446 80 11 0 chrUextra 11243889 11244640 -17760016 + TART LINE telomeric 410 1168 -13309 8 670 4078 0 5 0 chrUextra 11245591 11246035 -17758621 - R1_DM LINE R1 -4910 446 1 8 670 2877 0 0 0 chrUextra 11246035 11246342 -17758314 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2326 8 670 6647 19 1 0 chrUextra 11246442 11247193 -17757463 + FW_DM LINE Jockey 3723 4474 -218 8 670 813 10 10 10 chrUextra 11247293 11247393 -17757263 + LSU-rRNA_Dme rRNA rRNA 1692 1791 -2109 8 670 5639 2 0 2 chrUextra 11247434 11248044 -17756612 + LSU-rRNA_Dme rRNA rRNA 1788 2396 -1504 8 670 388 0 19 19 chrUextra 11248144 11248197 -17756459 - R2_DM LINE R2 -3552 55 3 8 670 693 71 41 0 chrUextra 11248177 11248275 -17756381 - R2B_DM LINE R2 -3426 102 1 8 670 6356 14 0 0 chrUextra 11248195 11248895 -17755761 - LSU-rRNA_Dme rRNA rRNA -1319 2581 1882 8 670 2121 166 30 25 chrUextra 11248995 11249741 -17754915 - SAR_DM Satellite Satellite -684 749 1 8 670 208 200 31 0 chrUextra 11250122 11250187 -17754469 + (TTA)n Simple_repeat Simple_repeat 2 68 0 8 670 21 36 0 0 chrUextra 11250510 11250538 -17754118 + AT_rich Low_complexity Low_complexity 1 28 0 8 670 208 200 31 0 chrUextra 11251144 11251209 -17753447 + (TTA)n Simple_repeat Simple_repeat 2 68 0 8 670 930 108 0 28 chrUextra 11251545 11251743 -17752913 + TART LINE telomeric 7598 7839 -6638 8 670 722 83 46 0 chrUextra 11251746 11251855 -17752801 + TART LINE telomeric 10224 10337 -4140 8 670 1915 64 0 47 chrUextra 11251851 11252130 -17752526 + TAHRE LINE telomeric 10186 10451 -12 8 670 880 174 31 0 chrUextra 11252129 11252290 -17752366 + TAHRE LINE telomeric 7044 7209 -3254 8 670 6388 28 7 3 chrUextra 11252395 11253145 -17751511 - MDG1_I LTR Gypsy -4256 2340 1588 8 670 2048 21 0 4 chrUextra 11253245 11253479 -17751177 + R1_DM LINE R1 5122 5354 -2 8 670 3584 81 4 4 chrUextra 11253514 11253995 -17750661 + R1_DM LINE R1 1 481 -4875 8 670 6959 1 1 0 chrUextra 11254097 11254845 -17749811 - LSU-rRNA_Dme rRNA rRNA -1324 2576 1828 8 670 3011 220 0 8 chrUextra 11254945 11255572 -17749084 - ROVER-I_DM LTR Gypsy -3756 2828 2207 8 670 4190 2 0 0 chrUextra 11255795 11256244 -17748412 + TABOR_LTR LTR Gypsy 58 506 0 8 670 2757 0 0 0 chrUextra 11256244 11256545 -17748111 + DMRT1B LINE R1 4825 5125 -58 8 670 1598 0 0 0 chrUextra 11256645 11256815 -17747841 + LSU-rRNA_Dme rRNA rRNA 3731 3900 0 8 670 268 196 0 19 chrUextra 11256916 11256968 -17747688 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 268 196 0 19 chrUextra 11257008 11257060 -17747596 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 268 196 0 19 chrUextra 11257100 11257152 -17747504 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 278 176 0 19 chrUextra 11257183 11257235 -17747421 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 22 56 0 0 chrUextra 11257248 11257284 -17747372 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 705 12 0 35 chrUextra 11257310 11257395 -17747261 + NTS_DM Other Other 25 106 -134 8 670 6487 4 0 0 chrUextra 11257522 11258245 -17746411 + IDEFIX_I LTR Gypsy 1 723 -4905 8 670 21 89 0 0 chrUextra 11258388 11258444 -17746212 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 5861 2 2 0 chrUextra 11258463 11259093 -17745563 - SSU-rRNA_Dme rRNA rRNA 0 1995 1365 8 670 21 89 0 0 chrUextra 11259337 11259393 -17745263 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 26 30 0 0 chrUextra 11259521 11259554 -17745102 + AT_rich Low_complexity Low_complexity 1 33 0 8 670 6462 29 0 0 chrUextra 11260045 11260795 -17743861 - R1_DM LINE R1 -1669 3687 2938 8 670 586 53 0 13 chrUextra 11260895 11260971 -17743685 - R1_DM LINE R1 -3011 2345 2271 8 670 442 20 0 0 chrUextra 11260964 11261014 -17743642 + CIRCE LINE Composite 4931 4980 -1376 8 670 2091 45 7 11 chrUextra 11261372 11261645 -17743011 + CIRCE LINE Composite 4981 5252 -1104 8 670 342 350 38 6 chrUextra 11261745 11261903 -17742753 + GA-rich Low_complexity Low_complexity 1 163 0 8 670 6584 3 4 5 chrUextra 11262608 11263345 -17741311 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1056 8 670 1894 172 30 8 chrUextra 11263459 11264195 -17740461 - SAR_DM Satellite Satellite -796 752 1 8 670 6685 0 0 5 chrUextra 11264295 11265045 -17739611 - R1_DM LINE R1 -1933 3423 2678 8 670 6418 1 0 33 chrUextra 11265145 11265895 -17738761 + LSU-rRNA_Dme rRNA rRNA 173 897 -3003 8 670 3409 40 40 0 chrUextra 11266325 11266745 -17737911 + PROTOP DNA P 1 437 -4043 8 670 465 50 0 0 chrUextra 11266845 11266905 -17737751 + (TATTG)n Simple_repeat Simple_repeat 1 60 0 8 670 1936 43 3 97 chrUextra 11266905 11267212 -17737444 - BATUMI_I LTR Pao -684 7279 7002 8 670 3363 0 5 5 chrUextra 11267212 11267595 -17737061 - BATUMI_I LTR Pao 0 7963 7581 8 670 3888 62 96 28 chrUextra 11267695 11268260 -17736396 - CIRCE LINE Composite -3551 2805 2203 8 670 1281 44 75 0 chrUextra 11268286 11268445 -17736211 - CIRCE LINE Composite -4471 1885 1715 8 670 6536 27 9 0 chrUextra 11268545 11269295 -17735361 - LSU-rRNA_Dme rRNA rRNA -73 3827 3071 8 670 3622 176 11 8 chrUextra 11269396 11270142 -17734514 - SAR_DM Satellite Satellite -432 1040 293 8 670 1414 167 359 8 chrUextra 11270477 11270967 -17733689 + MAX_I LTR Pao 557 1218 -6696 8 670 6899 8 0 0 chrUextra 11271097 11271845 -17732811 - Invader4_I LTR Gypsy -1369 1044 297 8 670 295 138 35 0 chrUextra 11271945 11272003 -17732653 - ARS406_DM Unknown Unknown -293 60 1 8 83 3404 185 18 8 chrUextra 11271965 11272694 -17731962 + SAR_DM Satellite Satellite 247 982 -490 8 671 6509 25 21 0 chrUextra 11272795 11273545 -17731111 - IDEFIX_I LTR Gypsy -3541 2087 1322 8 671 6349 28 27 1 chrUextra 11273645 11274395 -17730261 - FW_DM LINE Jockey -3721 971 203 8 671 6399 28 3 3 chrUextra 11274495 11275245 -17729411 - R1_DM LINE R1 -186 5170 4421 8 671 2040 186 15 13 chrUextra 11275345 11276093 -17728563 - SAR_DM Satellite Satellite -838 748 1 8 671 6677 12 19 0 chrUextra 11276195 11276945 -17727711 + FW_DM LINE Jockey 633 1396 -3296 8 671 454 55 0 0 chrUextra 11277045 11277100 -17727556 + DM176_LTR LTR Gypsy 453 507 0 8 671 4479 32 18 27 chrUextra 11277100 11277795 -17726861 + DM176_I LTR Gypsy 1 632 -5788 8 671 3132 190 25 25 chrUextra 11277895 11278645 -17726011 - SAR_DM Satellite Satellite -305 1167 418 8 671 4197 111 6 1 chrUextra 11278745 11279488 -17725168 + Gypsy2_I LTR Gypsy 3647 5111 -1901 8 671 5205 3 0 2 chrUextra 11279595 11280183 -17724473 - STALKER4_I LTR Gypsy -3079 3451 2865 8 671 1383 6 0 0 chrUextra 11280188 11280345 -17724311 - STALKER4_I LTR Gypsy -3795 2735 2579 8 671 1150 7 14 7 chrUextra 11280445 11280585 -17724071 + LSU-rRNA_Dme rRNA rRNA 1651 1791 -2109 8 671 5261 2 0 2 chrUextra 11280626 11281195 -17723461 + LSU-rRNA_Dme rRNA rRNA 1788 2355 -1545 8 671 3756 176 8 8 chrUextra 11281295 11282045 -17722611 + SAR_DM Satellite Satellite 284 1033 -439 8 671 324 25 25 0 chrUextra 11282145 11282185 -17722471 + ARS406_DM Unknown Unknown 149 189 -164 8 671 3234 188 18 25 chrUextra 11282153 11282895 -17721761 - SAR_DM Satellite Satellite -625 736 1 8 671 4379 30 270 8 chrUextra 11282995 11283666 -17720990 + MDG1_I LTR Gypsy 5750 6596 0 8 671 391 67 0 39 chrUextra 11283666 11283744 -17720912 + MDG1_LTR LTR Gypsy 1 75 -367 8 671 6675 16 1 1 chrUextra 11283845 11284595 -17720061 - DMCR1A LINE CR1 -1042 3428 2679 8 671 3836 26 0 0 chrUextra 11285545 11285998 -17718658 + Invader2_I LTR Gypsy 1978 2430 -2162 8 671 2661 7 0 0 chrUextra 11285996 11286293 -17718363 + Invader2_I LTR Gypsy 2710 3006 -1586 8 671 2133 8 0 0 chrUextra 11286395 11286631 -17718025 - G_DM LINE Jockey -228 4118 3883 8 671 4617 10 0 0 chrUextra 11286629 11287145 -17717511 - G_DM LINE Jockey -712 3634 3119 8 671 3475 180 8 11 chrUextra 11287246 11287991 -17716665 + SAR_DM Satellite Satellite 195 937 -535 8 671 4154 15 17 0 chrUextra 11288095 11288568 -17716088 - DOC LINE Jockey -4241 484 4 8 671 23 33 0 0 chrUextra 11288593 11288623 -17716033 + AT_rich Low_complexity Low_complexity 1 30 0 8 671 2993 23 0 0 chrUextra 11288945 11289292 -17715364 + FW_DM LINE Jockey 4345 4691 -1 8 671 895 138 66 32 chrUextra 11289312 11289624 -17715032 + HETA LINE telomeric 5965 6076 -5 8 671 21 36 0 0 chrUextra 11289667 11289695 -17714961 + AT_rich Low_complexity Low_complexity 1 28 0 8 671 7007 0 1 0 chrUextra 11290645 11291395 -17713261 - Gypsy2_I LTR Gypsy -1265 4870 4120 8 671 6720 11 3 1 chrUextra 11291495 11292245 -17712411 + DOC2_DM LINE Jockey 1930 2680 -2113 8 671 6370 28 12 0 chrUextra 11292345 11293095 -17711561 - R1_DM LINE R1 -2033 3323 2565 8 671 6851 3 1 0 chrUextra 11293195 11293945 -17710711 + ROO_I LTR Pao 6677 7427 -829 8 671 1483 213 52 37 chrUextra 11294897 11295639 -17709017 + SAR_DM Satellite Satellite 1 753 -749 8 671 976 0 0 9 chrUextra 11295745 11295853 -17708803 + LSU-rRNA_Dme rRNA rRNA 3794 3900 0 8 671 268 196 0 19 chrUextra 11295954 11296006 -17708650 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 268 196 0 19 chrUextra 11296046 11296098 -17708558 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 268 196 0 19 chrUextra 11296138 11296190 -17708466 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 278 176 0 19 chrUextra 11296221 11296273 -17708383 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 22 56 0 0 chrUextra 11296286 11296322 -17708334 + AT_rich Low_complexity Low_complexity 1 36 0 8 671 936 9 0 27 chrUextra 11296348 11296460 -17708196 + NTS_DM Other Other 25 133 -107 8 671 330 0 0 0 chrUextra 11296460 11296495 -17708161 + NTS_DM Other Other 38 72 -168 8 671 6510 24 1 0 chrUextra 11296595 11297345 -17707311 + R1_DM LINE R1 2181 2931 -2425 8 671 480 154 0 0 chrUextra 11297445 11297568 -17707088 + (CA)n Simple_repeat Simple_repeat 2 124 0 8 671 5561 11 0 0 chrUextra 11297571 11298195 -17706461 + DMRT1B LINE R1 1108 1731 -3452 8 671 6678 15 0 0 chrUextra 11298295 11299045 -17705611 + STALKER4_I LTR Gypsy 3341 4090 -2440 8 671 21 89 0 0 chrUextra 11299337 11299393 -17705263 + AT_rich Low_complexity Low_complexity 1 56 0 8 671 23 68 0 0 chrUextra 11299431 11299475 -17705181 + AT_rich Low_complexity Low_complexity 1 44 0 8 671 26 30 0 0 chrUextra 11299521 11299554 -17705102 + AT_rich Low_complexity Low_complexity 1 33 0 8 671 1888 32 0 14 chrUextra 11299995 11300217 -17704439 - DIVER2_LTR LTR Pao -166 219 1 8 671 3512 40 9 0 chrUextra 11300217 11300642 -17704014 - DIVER2_I LTR Pao 0 4147 3719 8 671 705 29 0 182 chrUextra 11300619 11300745 -17703911 - DIVER2_I LTR Pao -2572 1575 1473 8 671 6567 3 0 0 chrUextra 11300845 11301547 -17703109 - SSU-rRNA_Dme rRNA rRNA -1293 702 1 8 671 3481 168 19 28 chrUextra 11301697 11302444 -17702212 - SAR_DM Satellite Satellite -308 1164 425 8 671 6794 5 3 3 chrUextra 11302545 11303295 -17701361 - LSU-rRNA_Dme rRNA rRNA -2261 1639 890 8 671 3773 28 0 31 chrUextra 11304327 11304778 -17699878 - Baggins1 LINE LOA 0 5453 5017 8 671 1824 28 9 0 chrUextra 11304782 11304995 -17699661 - Baggins1 LINE LOA -97 5356 5142 8 671 7000 0 1 0 chrUextra 11305095 11305845 -17698811 - R2_DM LINE R2 -1348 2259 1509 8 671 382 17 0 133 chrUextra 11306560 11306695 -17697961 + T-rich Low_complexity Low_complexity 2 118 0 8 671 6467 23 1 0 chrUextra 11306795 11307545 -17697111 - G2_DM LINE Jockey -514 2588 1838 8 671 21 89 0 0 chrUextra 11308146 11308202 -17696454 + AT_rich Low_complexity Low_complexity 1 56 0 8 671 29 47 0 0 chrUextra 11308240 11308283 -17696373 + AT_rich Low_complexity Low_complexity 1 43 0 8 671 27 81 0 0 chrUextra 11308329 11308391 -17696265 + AT_rich Low_complexity Low_complexity 1 62 0 8 671 6911 1 1 1 chrUextra 11308495 11309245 -17695411 + R2_DM LINE R2 41 790 -2817 8 671 3424 67 55 0 chrUextra 11309345 11309796 -17694860 - TART LINE telomeric -12717 1760 1285 8 671 1986 108 62 0 chrUextra 11309772 11310095 -17694561 - TART_B1 LINE telomeric -4902 5752 5410 8 671 5135 99 60 1 chrUextra 11310195 11310945 -17693711 + Invader1_I LTR Gypsy 1893 2686 -500 8 671 1579 311 59 20 chrUextra 11311050 11311792 -17692864 + Invader6_I LTR Gypsy 1828 2598 -1501 8 671 21 57 0 0 chrUextra 11311912 11311947 -17692709 + AT_rich Low_complexity Low_complexity 1 35 0 8 671 1350 18 0 6 chrUextra 11311947 11312112 -17692544 - NTS_DM Other Other -39 201 38 8 671 936 9 0 27 chrUextra 11312112 11312224 -17692432 - NTS_DM Other Other -107 133 25 8 671 1350 18 0 6 chrUextra 11312276 11312441 -17692215 - NTS_DM Other Other -39 201 38 8 671 936 9 0 27 chrUextra 11312441 11312553 -17692103 - NTS_DM Other Other -107 133 25 8 671 331 25 0 0 chrUextra 11312605 11312645 -17692011 - NTS_DM Other Other -39 201 162 8 671 3208 184 31 28 chrUextra 11313599 11314344 -17690312 + SAR_DM Satellite Satellite 465 1211 -261 8 671 995 35 0 0 chrUextra 11314466 11314580 -17690076 - R1_DM LINE R1 0 5356 5243 8 671 5374 23 3 0 chrUextra 11314577 11315195 -17689461 - R1_DM LINE R1 -290 5066 4447 8 671 2728 16 5 17 chrUextra 11316145 11316895 -17687761 - HETRP_DM Satellite Satellite -1259 741 1 8 671 288 0 0 0 chrUextra 11317005 11317039 -17687617 - PROTOP_B DNA P -1119 34 1 8 671 3586 186 20 25 chrUextra 11318695 11319440 -17685216 - SAR_DM Satellite Satellite -1078 741 1 8 671 5369 66 3 15 chrUextra 11319551 11320295 -17684361 - BATUMI_I LTR Pao -5170 2744 1979 8 671 6647 21 1 0 chrUextra 11320395 11321145 -17683511 + STALKER4_I LTR Gypsy 3995 4745 -1785 8 671 3602 179 7 8 chrUextra 11321246 11321988 -17682668 + SAR_DM Satellite Satellite 218 958 -514 8 671 2561 116 7 36 chrUextra 11322095 11322845 -17681811 + DMSAT6 Satellite Satellite 1 728 -3 8 671 2771 184 11 5 chrUextra 11322945 11323669 -17680987 - SAR_DM Satellite Satellite -728 727 1 8 671 574 138 45 9 chrUextra 11323583 11323693 -17680963 + ARS406_DM Unknown Unknown 1 114 -239 8 671 6440 29 0 1 chrUextra 11324645 11325395 -17679261 + R1_DM LINE R1 2866 3614 -1742 8 671 6936 0 0 0 chrUextra 11325495 11326245 -17678411 + Copia_I LTR Copia 35 784 -3809 8 671 6516 17 1 3 chrUextra 11326345 11327095 -17677561 + R1_DM LINE R1 3689 4437 -919 8 671 3858 0 2 0 chrUextra 11327196 11327616 -17677040 - DM1731_I LTR Copia -3555 421 1 8 671 2728 34 34 0 chrUextra 11327616 11327941 -17676715 - DM1731_LTR LTR Copia 0 336 1 8 671 1401 6 0 18 chrUextra 11328120 11328285 -17676371 - NTS_DM Other Other -78 162 1 8 671 2006 0 17 13 chrUextra 11328285 11328524 -17676132 - NTS_DM Other Other 0 240 1 8 671 2006 0 17 13 chrUextra 11328524 11328763 -17675893 - NTS_DM Other Other 0 240 1 8 671 6854 1 1 0 chrUextra 11328895 11329645 -17675011 + FW_DM LINE Jockey 874 1624 -3068 8 671 28 48 0 0 chrUextra 11330016 11330058 -17674598 + AT_rich Low_complexity Low_complexity 1 42 0 8 671 532 129 24 0 chrUextra 11330331 11330416 -17674240 - NTS_DM Other Other -150 90 4 8 671 6404 27 24 0 chrUextra 11330595 11331345 -17673311 - FW_DM LINE Jockey -1032 3660 2893 8 671 6792 1 1 1 chrUextra 11331445 11332195 -17672461 + DOC LINE Jockey 1330 2079 -2646 8 671 4264 0 0 2 chrUextra 11332295 11332753 -17671903 + LSU-rRNA_Dme rRNA rRNA 2230 2686 -1214 8 671 2523 7 3 0 chrUextra 11332750 11333045 -17671611 + R1_DM LINE R1 852 1147 -4209 8 671 250 33 0 0 chrUextra 11333233 11333263 -17671393 + Baggins1 LINE LOA 4727 4756 -697 8 671 664 73 324 0 chrUextra 11333271 11333407 -17671249 - FB4_DM DNA Tc1 -3907 182 3 8 671 2922 182 19 24 chrUextra 11333997 11334745 -17669911 - SAR_DM Satellite Satellite -281 1191 448 8 671 3338 169 12 9 chrUextra 11334848 11335595 -17669061 + SAR_DM Satellite Satellite 282 1030 -442 8 671 1680 0 0 0 chrUextra 11335695 11335913 -17668743 + HMSBEAGLE_I LTR Gypsy 570 787 -5742 8 671 677 33 49 16 chrUextra 11335928 11336050 -17668606 + (TTA)n Simple_repeat Simple_repeat 3 128 0 8 671 3373 0 0 0 chrUextra 11336050 11336445 -17668211 + HMSBEAGLE_I LTR Gypsy 976 1370 -5159 8 671 5031 33 13 0 chrUextra 11336545 11337182 -17667474 + IDEFIX_I LTR Gypsy 1562 2206 -3422 8 671 840 20 0 0 chrUextra 11337195 11337295 -17667361 - HMSBEAGLE_I LTR Gypsy -4422 2107 2008 8 671 26 30 0 0 chrUextra 11337412 11337445 -17667211 + AT_rich Low_complexity Low_complexity 1 33 0 8 671 2542 32 3 0 chrUextra 11337821 11338137 -17666519 - PROTOP DNA P 0 4480 4164 8 671 6286 17 1 0 chrUextra 11338245 11338995 -17665661 - DMRT1A LINE R1 -2491 2692 1942 8 671 365 284 147 5 chrUextra 11339095 11339293 -17665363 + Gypsy7_I LTR Gypsy 1442 1667 -3317 8 671 1314 29 6 39 chrUextra 11339319 11339501 -17665155 - G5A_DM LINE Jockey -3 2838 2663 8 671 329 305 0 0 chrUextra 11339502 11339630 -17665026 + Gypsy7_I LTR Gypsy 1239 1366 -3618 8 671 2720 0 0 0 chrUextra 11339945 11340253 -17664403 + ROO_LTR LTR Pao 121 428 0 8 671 3108 14 15 26 chrUextra 11340253 11340695 -17663961 + ROO_I LTR Pao 1 531 -7725 8 671 6005 15 1 0 chrUextra 11340795 11341545 -17663111 - Invader2_I LTR Gypsy -1082 3510 2760 8 671 2924 195 15 20 chrUextra 11342495 11343245 -17661411 + SAR_DM Satellite Satellite 1 746 -208 8 671 2166 220 39 26 chrUextra 11343401 11344093 -17660563 - TAHRE LINE telomeric -374 10089 9389 8 671 3876 7 0 0 chrUextra 11344195 11344647 -17660009 + DMRT1B LINE R1 3256 3707 -1476 8 671 1620 0 0 0 chrUextra 11344647 11344930 -17659726 + (CACAA)n Simple_repeat Simple_repeat 1 283 0 8 671 5950 9 19 0 chrUextra 11345045 11345795 -17658861 + ROO_I LTR Pao 318 1081 -7175 8 671 2856 181 16 25 chrUextra 11345895 11346643 -17658013 + SAR_DM Satellite Satellite 1 740 -261 8 671 6020 31 1 1 chrUextra 11346745 11347495 -17657161 - MDG1_I LTR Gypsy -2232 4364 3615 8 671 1148 24 0 116 chrUextra 11347595 11347784 -17656872 - CIRCE LINE Composite -4885 1471 1305 8 671 543 335 22 22 chrUextra 11347627 11347938 -17656718 - Gypsy12_I LTR Gypsy -2177 3369 3059 8 671 2261 62 0 75 chrUextra 11347850 11348196 -17656460 - CIRCE LINE Composite -5064 1292 973 8 671 6413 3 0 4 chrUextra 11348445 11349195 -17655461 + G2_DM LINE Jockey 769 1515 -1587 8 671 3181 182 17 8 chrUextra 11349295 11350041 -17654615 - SAR_DM Satellite Satellite -453 1019 267 8 671 1640 319 15 16 chrUextra 11350147 11350892 -17653764 - MICROPIA_I LTR Gypsy -1583 2893 2150 8 671 1966 162 26 3 chrUextra 11351006 11351396 -17653260 - TART LINE telomeric -5127 9350 8952 8 671 2987 178 27 54 chrUextra 11351843 11352590 -17652066 + SAR_DM Satellite Satellite 1 726 -208 8 671 2794 122 119 8 chrUextra 11352728 11353440 -17651216 - TART LINE telomeric -6799 7678 7096 8 671 6184 11 1 0 chrUextra 11354390 11355139 -17649517 - STALKER4_I LTR Gypsy -4493 2037 1288 8 671 2776 191 18 22 chrUextra 11355242 11355981 -17648675 - SAR_DM Satellite Satellite -300 1172 437 8 671 6094 20 8 5 chrUextra 11356088 11356837 -17647819 + FW_DM LINE Jockey 3498 4248 -444 8 671 21 95 0 0 chrUextra 11356966 11357029 -17647627 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 34 24 0 0 chrUextra 11357242 11357283 -17647373 + AT_rich Low_complexity Low_complexity 1 41 0 8 671 47 0 0 0 chrUextra 11358225 11358272 -17646384 + AT_rich Low_complexity Low_complexity 1 47 0 8 671 30 69 0 0 chrUextra 11358322 11358380 -17646276 + AT_rich Low_complexity Low_complexity 1 58 0 8 671 6423 3 0 1 chrUextra 11358635 11359384 -17645272 + R1_DM LINE R1 3063 3810 -1546 8 671 779 72 24 8 chrUextra 11360548 11360674 -17643982 - STALKER4_I LTR Gypsy -5645 885 758 8 671 977 171 94 79 chrUextra 11360740 11361082 -17643574 - ROVER-LTR_DM LTR Gypsy 0 367 21 8 671 28 48 0 0 chrUextra 11361391 11361433 -17643223 + AT_rich Low_complexity Low_complexity 1 42 0 8 671 32 0 0 0 chrUextra 11361762 11361794 -17642862 + AT_rich Low_complexity Low_complexity 1 32 0 8 671 1514 38 0 0 chrUextra 11362031 11362217 -17642439 + PROTOP DNA P 4295 4480 0 8 671 26 30 0 0 chrUextra 11362567 11362600 -17642056 + AT_rich Low_complexity Low_complexity 1 33 0 8 671 1644 9 18 18 chrUextra 11363729 11363954 -17640702 + NTS_DM Other Other 16 240 0 8 671 1756 17 17 17 chrUextra 11363954 11364194 -17640462 + NTS_DM Other Other 1 240 0 8 671 1683 34 17 13 chrUextra 11364194 11364433 -17640223 + NTS_DM Other Other 1 240 0 8 671 376 22 0 0 chrUextra 11364433 11364478 -17640178 + NTS_DM Other Other 1 45 -195 8 671 3703 200 0 4 chrUextra 11364578 11365326 -17639330 - ROVER-I_DM LTR Gypsy -3231 3353 2609 8 671 244 128 0 21 chrUextra 11365779 11365827 -17638829 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 671 244 128 0 21 chrUextra 11366053 11366101 -17638555 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 671 6124 7 9 0 chrUextra 11366276 11367025 -17637631 + STALKER4_I LTR Gypsy 4904 5659 -871 8 671 2411 0 3 0 chrUextra 11367125 11367416 -17637240 - ROVER-I_DM LTR Gypsy -985 5599 5308 8 671 3109 17 5 0 chrUextra 11367465 11367874 -17636782 - ROVER-I_DM LTR Gypsy -1253 5331 4921 8 671 6532 1 3 0 chrUextra 11367974 11368723 -17635933 - R2_DM LINE R2 -1652 1955 1205 8 671 733 99 0 22 chrUextra 11368823 11368957 -17635699 - ARS406_DM Unknown Unknown -222 131 1 8 671 2927 174 14 16 chrUextra 11368862 11369572 -17635084 + SAR_DM Satellite Satellite 195 903 -569 8 671 6182 24 1 0 chrUextra 11369672 11370421 -17634235 - R1_DM LINE R1 -201 5155 4406 8 671 2973 3 0 0 chrUextra 11370521 11370864 -17633792 - LSU-rRNA_Dme rRNA rRNA -918 2982 2640 8 671 3511 2 0 0 chrUextra 11370866 11371270 -17633386 - R1_DM LINE R1 0 5356 4953 8 671 6506 4 0 0 chrUextra 11371370 11372119 -17632537 + LINEJ1_DM LINE Jockey 4024 4772 -248 8 671 4944 101 17 5 chrUextra 11372219 11372968 -17631688 - R1_DM LINE R1 -3854 1502 745 8 671 3138 170 11 13 chrUextra 11373108 11373817 -17630839 - SAR_DM Satellite Satellite -396 1076 369 8 671 4913 72 13 30 chrUextra 11373920 11374666 -17629990 - CIRCE LINE Composite -2431 3925 3192 8 671 3070 184 26 9 chrUextra 11374770 11375515 -17629141 + SAR_DM Satellite Satellite 1 758 -396 8 671 943 8 0 24 chrUextra 11375615 11375740 -17628916 + NTS_DM Other Other 41 162 -78 8 671 488 119 36 0 chrUextra 11375850 11375934 -17628722 + NTS_DM Other Other 4 90 -150 8 671 28 48 0 0 chrUextra 11376207 11376249 -17628407 + AT_rich Low_complexity Low_complexity 1 42 0 8 671 34 24 0 0 chrUextra 11376994 11377035 -17627621 + AT_rich Low_complexity Low_complexity 1 41 0 8 671 1645 325 9 15 chrUextra 11377313 11378056 -17626600 - MICROPIA_I LTR Gypsy -656 3820 3082 8 671 3336 174 12 13 chrUextra 11378164 11378911 -17625745 + SAR_DM Satellite Satellite 246 991 -481 8 671 6333 3 29 0 chrUextra 11379011 11379760 -17624896 - STALKER4_I LTR Gypsy -2142 4388 3618 8 671 6076 20 0 0 chrUextra 11379860 11380609 -17624047 + FW_DM LINE Jockey 2710 3458 -1234 8 671 4998 20 53 19 chrUextra 11380709 11381355 -17623301 - CIRCE LINE Composite -3265 3091 2424 8 671 894 10 0 0 chrUextra 11381355 11381458 -17623198 - PROTOP_A DNA P 0 1105 1003 8 671 946 78 6 19 chrUextra 11381610 11382291 -17622365 - RSP Satellite Satellite 0 672 1 8 671 714 286 119 10 chrUextra 11382408 11382796 -17621860 + Gypsy7_I LTR Gypsy 1238 1667 -3317 8 671 2485 43 6 21 chrUextra 11382823 11383156 -17621500 - G5A_DM LINE Jockey -3 2838 2511 8 671 2107 111 21 40 chrUextra 11383256 11383782 -17620874 + QUASIMODO_LTR LTR Gypsy 64 643 -15 8 671 5619 1 3 65 chrUextra 11384959 11385703 -17618953 + LSU-rRNA_Dme rRNA rRNA 1517 2214 -1686 8 671 6286 7 0 0 chrUextra 11386652 11387401 -17617255 + STALKER4_I LTR Gypsy 5373 6121 -409 8 671 34 24 0 0 chrUextra 11387588 11387629 -17617027 + AT_rich Low_complexity Low_complexity 1 41 0 8 671 21 95 0 0 chrUextra 11387842 11387905 -17616751 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 2493 3 0 75 chrUextra 11387917 11388250 -17616406 + LSU-rRNA_Dme rRNA rRNA 1 308 -3592 8 671 1567 47 25 41 chrUextra 11388373 11388618 -17616038 - BATUMI_LTR LTR Pao 0 272 32 8 671 3141 73 0 5 chrUextra 11388642 11389080 -17615576 - BATUMI_I LTR Pao -14 7949 7514 8 671 3633 0 0 56 chrUextra 11390048 11390516 -17614140 - LSU-rRNA_Dme rRNA rRNA -3458 442 1 8 671 21 95 0 0 chrUextra 11390528 11390591 -17614065 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 5361 19 0 0 chrUextra 11390897 11391535 -17613121 - R1_DM LINE R1 -693 4663 4026 8 671 759 20 20 10 chrUextra 11391545 11391646 -17613010 - R1_DM LINE R1 -1690 3666 3565 8 671 276 77 0 0 chrUextra 11392844 11392883 -17611773 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 671 2401 203 82 28 chrUextra 11393448 11394193 -17610463 + Gypsy12_LTR LTR Gypsy 1395 2179 -157 8 671 4654 0 0 43 chrUextra 11394293 11394880 -17609776 - LSU-rRNA_Dme rRNA rRNA -3338 562 1 8 671 21 95 0 0 chrUextra 11394892 11394955 -17609701 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 3149 179 12 21 chrUextra 11395143 11395891 -17608765 - SAR_DM Satellite Satellite -428 1044 304 8 671 3015 169 23 19 chrUextra 11396002 11396734 -17607922 + SAR_DM Satellite Satellite 321 1055 -417 8 671 6175 15 1 0 chrUextra 11396840 11397589 -17607067 + ROO_I LTR Pao 5672 6421 -1835 8 671 407 69 0 0 chrUextra 11398220 11398278 -17606378 - DNAREP1_DM LINE Penelope -9 585 528 8 671 622 143 0 50 chrUextra 11398278 11398418 -17606238 - DNAREP1_DM LINE Penelope -263 331 199 8 671 5032 55 1 49 chrUextra 11398538 11399287 -17605369 - BATUMI_I LTR Pao -4867 3096 2384 8 671 653 0 0 23 chrUextra 11399387 11399474 -17605182 + BATUMI_I LTR Pao 7879 7963 0 8 671 2148 28 0 30 chrUextra 11399474 11399767 -17604889 + BATUMI_I LTR Pao 7002 7285 -678 8 671 2696 24 3 3 chrUextra 11399766 11400136 -17604520 - ACCORD2_I LTR Gypsy -235 6977 6608 8 671 5864 9 36 1 chrUextra 11400236 11400985 -17603671 + DM176_I LTR Gypsy 847 1621 -4799 8 671 6277 12 3 1 chrUextra 11401934 11402683 -17601973 - Gypsy4_I LTR Gypsy -3164 3124 2375 8 671 655 111 0 0 chrUextra 11402784 11402892 -17601764 - ARS406_DM Unknown Unknown -245 108 1 8 83 3185 178 7 11 chrUextra 11402799 11403531 -17601125 + SAR_DM Satellite Satellite 195 923 -549 8 672 5607 33 83 1 chrUextra 11403632 11404381 -17600275 + IDEFIX_I LTR Gypsy 1442 2251 -3377 8 672 4856 9 0 0 chrUextra 11404481 11405048 -17599608 - DMRT1B LINE R1 -1402 3781 3215 8 672 1560 11 0 0 chrUextra 11405049 11405227 -17599429 + (TTGTG)n Simple_repeat Simple_repeat 1 178 0 8 672 294 297 104 86 chrUextra 11405535 11405815 -17598841 - Invader1_LTR LTR Gypsy -55 368 84 8 672 256 151 0 36 chrUextra 11406024 11406079 -17598577 + DMLTR5 LTR Gypsy 44 96 -170 8 672 3644 7 2 2 chrUextra 11406179 11406617 -17598039 + IDEFIX_LTR LTR Gypsy 157 594 0 8 672 491 107 0 0 chrUextra 11406622 11406697 -17597959 + ROVER-LTR_DM LTR Gypsy 73 147 -220 8 672 297 192 25 13 chrUextra 11406783 11406862 -17597794 + ROVER-I_DM LTR Gypsy 1 80 -6504 8 672 2851 35 5 5 chrUextra 11407053 11407421 -17597235 + PROTOP_A DNA P 737 1104 -1 8 672 2834 28 0 0 chrUextra 11407422 11407777 -17596879 - DOC3_DM LINE Jockey -1670 3070 2716 8 672 244 128 0 21 chrUextra 11408083 11408131 -17596525 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 672 351 85 661 14 chrUextra 11409105 11409237 -17595419 - HMSBEAGLE_I LTR Gypsy -6308 221 1 8 672 742 185 0 7 chrUextra 11409236 11409383 -17595273 - DMLTR5 LTR Gypsy 0 266 121 8 672 1302 56 0 0 chrUextra 11409575 11409755 -17594901 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 8 672 1620 3 2 2 chrUextra 11409755 11410324 -17594332 + (AGATG)n Simple_repeat Simple_repeat 1 569 0 8 672 4141 71 23 0 chrUextra 11410424 11411000 -17593656 + MICROPIA_I LTR Gypsy 2215 2803 -1673 8 672 1181 102 0 6 chrUextra 11410996 11411173 -17593483 + MICROPIA_I LTR Gypsy 3356 3531 -945 8 672 3377 93 2 2 chrUextra 11411273 11411790 -17592866 + S_DM DNA Tc1 1220 1736 0 8 672 994 61 0 0 chrUextra 11413001 11413133 -17591523 - HETA LINE telomeric -4584 1497 1366 8 672 2586 92 5 38 chrUextra 11413132 11413551 -17591105 - HETA LINE telomeric -106 5975 5571 8 672 1112 84 6 12 chrUextra 11413552 11413720 -17590936 - TART LINE telomeric -4500 9977 9811 8 672 1144 129 10 19 chrUextra 11413821 11414027 -17590629 + Gypsy12A_LTR LTR Gypsy 2059 2262 -18 8 672 664 208 218 23 chrUextra 11414034 11414432 -17590224 + TAHRE LINE telomeric 9807 10489 -3988 8 672 591 108 153 0 chrUextra 11415307 11415418 -17589238 - DNAREP1_DM LINE Penelope 0 594 467 8 672 6326 16 0 0 chrUextra 11415518 11416267 -17588389 - DM1731_I LTR Copia -328 3648 2900 8 672 1602 25 0 3 chrUextra 11416387 11417013 -17587643 + (TTATA)n Simple_repeat Simple_repeat 1 623 0 8 672 211 200 29 58 chrUextra 11417028 11417097 -17587559 + (CCTAT)n Simple_repeat Simple_repeat 3 69 0 8 672 5066 53 1 49 chrUextra 11417216 11417965 -17586691 + BATUMI_I LTR Pao 2298 3010 -4953 8 672 925 94 0 0 chrUextra 11418067 11418216 -17586440 + ARS406_DM Unknown Unknown 10 158 -195 8 672 2731 164 10 5 chrUextra 11418223 11418798 -17585858 - SAR_DM Satellite Satellite -569 903 326 8 672 4044 144 4 5 chrUextra 11418914 11419654 -17585002 - TART_B1 LINE telomeric -9069 1585 847 8 672 2777 197 11 18 chrUextra 11419763 11420512 -17584144 + SAR_DM Satellite Satellite 1 744 -281 8 672 477 0 0 0 chrUextra 11421304 11421357 -17583299 + (GAGAA)n Simple_repeat Simple_repeat 2 54 0 8 672 1730 150 2 5 chrUextra 11422310 11422716 -17581940 + SAR_DM Satellite Satellite 1 404 -987 8 672 1486 187 3 3 chrUextra 11422731 11423059 -17581597 + SAR_DM Satellite Satellite 496 823 -649 8 672 2369 31 0 0 chrUextra 11423161 11423449 -17581207 + R1_DM LINE R1 5069 5356 0 8 672 3083 66 5 5 chrUextra 11423482 11423908 -17580748 + R1_DM LINE R1 1 426 -4930 8 672 204 40 0 0 chrUextra 11424490 11424515 -17580141 + (TA)n Simple_repeat Simple_repeat 1 25 0 8 672 259 185 12 36 chrUextra 11424583 11424667 -17579989 + T-rich Low_complexity Low_complexity 3 84 0 8 672 3074 32 2 5 chrUextra 11424857 11425262 -17579394 + CIRCE LINE Composite 4577 4980 -1376 8 672 1164 53 0 0 chrUextra 11425454 11425606 -17579050 - R1_DM LINE R1 -4037 1319 1168 8 672 6432 0 1 4 chrUextra 11426555 11427304 -17577352 + SSU-rRNA_Dme rRNA rRNA 903 1649 -346 8 672 4147 48 24 70 chrUextra 11427404 11428145 -17576511 + BATUMI_I LTR Pao 60 766 -7197 8 672 6575 1 0 0 chrUextra 11428253 11429002 -17575654 - SSU-rRNA_Dme rRNA rRNA -992 1003 255 8 672 239 236 28 0 chrUextra 11429102 11429174 -17575482 + Gypsy12A_LTR LTR Gypsy 310 383 -1953 8 672 270 232 0 0 chrUextra 11429238 11429294 -17575362 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 8 672 1083 263 22 72 chrUextra 11429306 11429851 -17574805 + Gypsy12_LTR LTR Gypsy 524 1041 -1295 8 672 6541 0 1 1 chrUextra 11429951 11430700 -17573956 - LSU-rRNA_Dme rRNA rRNA -6 3894 3146 8 672 1833 201 109 42 chrUextra 11430803 11431547 -17573109 - HETA LINE telomeric -358 5723 5062 8 672 6449 5 0 0 chrUextra 11431650 11432398 -17572258 + R1_DM LINE R1 4239 4986 -370 8 672 6334 7 1 1 chrUextra 11432498 11433247 -17571409 - R1_DM LINE R1 -1489 3867 3119 8 672 2196 8 19 7 chrUextra 11434196 11434465 -17570191 + QUASIMODO_LTR LTR Gypsy 387 658 0 8 672 3713 38 6 2 chrUextra 11434465 11434944 -17569712 + QUASIMODO_I LTR Gypsy 1 481 -5579 8 672 2495 20 10 0 chrUextra 11435044 11435347 -17569309 + PROTOP_A DNA P 800 1105 0 8 672 243 299 59 70 chrUextra 11436397 11436584 -17568072 - Invader1_LTR LTR Gypsy -55 368 184 8 672 394 0 0 0 chrUextra 11436740 11436785 -17567871 - NTS_DM Other Other -158 82 38 8 672 870 9 0 27 chrUextra 11436785 11436897 -17567759 - NTS_DM Other Other -107 133 25 8 672 1252 18 0 6 chrUextra 11436949 11437114 -17567542 - NTS_DM Other Other -39 201 38 8 672 870 9 0 27 chrUextra 11437114 11437226 -17567430 - NTS_DM Other Other -107 133 25 8 672 1252 18 0 6 chrUextra 11437278 11437443 -17567213 - NTS_DM Other Other -39 201 38 8 672 336 0 0 0 chrUextra 11437443 11437488 -17567168 - NTS_DM Other Other -107 133 89 8 672 324 273 116 83 chrUextra 11437937 11438213 -17566443 - Invader1_LTR LTR Gypsy -55 368 84 8 672 6277 11 8 0 chrUextra 11438436 11439184 -17565472 + Copia2_I LTR Copia 773 1526 -2636 8 672 673 111 8 0 chrUextra 11439284 11439401 -17565255 - ARS406_DM Unknown Unknown -235 118 1 8 672 3109 180 10 11 chrUextra 11439309 11440032 -17564624 + SAR_DM Satellite Satellite 195 916 -556 8 672 3026 172 19 27 chrUextra 11440138 11440880 -17563776 - SAR_DM Satellite Satellite -308 1164 429 8 672 1497 22 0 0 chrUextra 11440980 11441159 -17563497 - R1_DM LINE R1 -3500 1856 1678 8 672 1502 40 62 13 chrUextra 11441156 11441383 -17563273 - R1_DM LINE R1 -4389 967 730 8 672 2728 53 0 6 chrUextra 11441365 11441726 -17562930 - R1_DM LINE R1 -4741 615 257 8 672 3329 101 112 36 chrUextra 11441962 11442576 -17562080 - Gypsy12_I LTR Gypsy -4442 1104 444 8 672 1584 82 77 12 chrUextra 11442676 11442924 -17561732 + Gypsy12_I LTR Gypsy 5283 5546 0 8 672 1628 187 23 26 chrUextra 11442941 11443326 -17561330 + Gypsy12_LTR LTR Gypsy 15 398 -1938 8 672 424 81 42 95 chrUextra 11443323 11443418 -17561238 + Gypsy12_I LTR Gypsy 47 136 -5410 8 672 3666 129 28 38 chrUextra 11443552 11444271 -17560385 - TART LINE telomeric -4301 10176 9465 8 672 3141 194 19 21 chrUextra 11444374 11445118 -17559538 - SAR_DM Satellite Satellite -577 742 1 8 672 3967 11 86 1 chrUextra 11445220 11445968 -17558688 - DOC2_DM LINE Jockey -587 4206 3396 8 672 4394 116 2 3 chrUextra 11446068 11446816 -17557840 + BATUMI_I LTR Pao 3795 4617 -3297 8 672 1944 0 5 5 chrUextra 11446929 11447151 -17557505 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 672 21 95 0 0 chrUextra 11447163 11447226 -17557430 + AT_rich Low_complexity Low_complexity 1 63 0 8 672 34 24 0 0 chrUextra 11447439 11447480 -17557176 + AT_rich Low_complexity Low_complexity 1 41 0 8 672 180 239 0 0 chrUextra 11447870 11448033 -17556623 + (TTTG)n Simple_repeat Simple_repeat 4 166 0 8 672 687 156 0 0 chrUextra 11448042 11448221 -17556435 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 672 2615 0 0 0 chrUextra 11448227 11448512 -17556144 - DMRT1B LINE R1 0 5183 4899 8 672 2877 171 17 15 chrUextra 11448613 11449358 -17555298 + SAR_DM Satellite Satellite 1 746 -378 8 672 1695 38 0 0 chrUextra 11449460 11449695 -17554961 - QUASIMODO_I LTR Gypsy -335 5725 5491 8 672 3560 52 44 10 chrUextra 11449704 11450208 -17554448 - QUASIMODO_I LTR Gypsy -885 5175 4655 8 672 594 181 214 45 chrUextra 11450308 11450528 -17554128 - STALKER4_I LTR Gypsy -5389 1141 885 8 672 821 72 24 8 chrUextra 11450874 11451000 -17553656 - STALKER4_I LTR Gypsy -5645 885 758 8 672 2481 7 0 0 chrUextra 11451156 11451434 -17553222 - R1_DM LINE R1 -1053 4303 4026 8 672 3887 36 6 0 chrUextra 11451436 11451904 -17552752 - R1_DM LINE R1 -1679 3677 3207 8 672 1890 18 5 0 chrUextra 11452004 11452223 -17552433 + DOC2_DM LINE Jockey 2289 2508 -2285 8 672 4656 19 0 0 chrUextra 11452221 11452752 -17551904 + DOC2_DM LINE Jockey 3436 3966 -827 8 672 2550 91 20 11 chrUextra 11452852 11453595 -17551061 + DMSAT6 Satellite Satellite 1 750 -57 8 672 3248 179 39 12 chrUextra 11453700 11454448 -17550208 + SAR_DM Satellite Satellite 256 1023 -449 8 672 600 84 0 0 chrUextra 11454548 11454631 -17550025 - G2_DM LINE Jockey -769 2333 2251 8 672 4769 42 51 7 chrUextra 11454631 11455235 -17549421 - G2_DM LINE Jockey -1061 2041 1411 8 672 3104 192 11 12 chrUextra 11455397 11456144 -17548512 + SAR_DM Satellite Satellite 212 957 -515 8 672 3257 193 15 21 chrUextra 11456244 11456988 -17547668 + SAR_DM Satellite Satellite 1 739 -216 8 672 369 258 118 100 chrUextra 11457107 11457387 -17547269 + Invader1_LTR LTR Gypsy 84 368 -55 8 672 6531 19 4 0 chrUextra 11457940 11458688 -17545968 + Copia2_I LTR Copia 1858 2608 -1554 8 672 3027 3 0 0 chrUextra 11458788 11459126 -17545530 - Stalker2_LTR LTR Gypsy -86 338 1 8 672 2794 23 12 27 chrUextra 11459126 11459536 -17545120 - Stalker2_I LTR Gypsy 0 7402 6999 8 672 1512 0 0 0 chrUextra 11460216 11460384 -17544272 + (TTCTC)n Simple_repeat Simple_repeat 4 171 0 8 672 6005 0 1 50 chrUextra 11460484 11461232 -17543424 - Invader3_I LTR Gypsy -2458 2430 1719 8 672 6547 12 1 0 chrUextra 11461332 11462080 -17542576 + IVK_DM LINE I 1615 2363 -3039 8 672 6619 15 0 0 chrUextra 11462180 11462926 -17541730 + BATUMI_I LTR Pao 4781 5526 -2437 8 672 261 234 26 26 chrUextra 11463569 11463683 -17540973 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 8 672 6859 3 0 0 chrUextra 11463876 11464624 -17540032 + R2_DM LINE R2 1217 1964 -1643 8 672 1992 190 181 46 chrUextra 11464724 11465398 -17539258 + TART LINE telomeric 9727 10491 -3986 8 672 34 24 0 0 chrUextra 11465409 11465450 -17539206 + AT_rich Low_complexity Low_complexity 1 41 0 8 672 3136 191 15 23 chrUextra 11465572 11466320 -17538336 + SAR_DM Satellite Satellite 1 741 -203 8 672 3396 155 39 8 chrUextra 11466421 11467135 -17537521 + SAR_DM Satellite Satellite 376 1111 -361 8 672 232 103 0 0 chrUextra 11467125 11467164 -17537492 - XDMR Unknown Unknown -16 345 307 8 672 6587 1 0 0 chrUextra 11467268 11468016 -17536640 - ROO_I LTR Pao -4510 3746 2999 8 672 6720 3 0 0 chrUextra 11468116 11468864 -17535792 - FW_DM LINE Jockey -3153 1539 792 8 672 262 150 0 0 chrUextra 11469007 11469047 -17535609 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 672 262 150 0 0 chrUextra 11469099 11469139 -17535517 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 672 244 150 0 0 chrUextra 11469182 11469222 -17535434 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 672 22 56 0 0 chrUextra 11469235 11469271 -17535385 + AT_rich Low_complexity Low_complexity 1 36 0 8 672 907 9 0 27 chrUextra 11469297 11469409 -17535247 + NTS_DM Other Other 25 133 -107 8 672 1304 18 0 6 chrUextra 11469409 11469574 -17535082 + NTS_DM Other Other 38 201 -39 8 672 696 12 0 35 chrUextra 11469626 11469712 -17534944 + NTS_DM Other Other 25 107 -133 8 672 663 26 0 0 chrUextra 11469812 11469888 -17534768 - Baggins1 LINE LOA -63 5390 5315 8 672 1793 33 124 0 chrUextra 11469884 11470125 -17534531 - Baggins1 LINE LOA -456 4997 4727 8 672 27 29 0 0 chrUextra 11470328 11470362 -17534294 + AT_rich Low_complexity Low_complexity 1 34 0 8 672 3042 14 25 6 chrUextra 11470660 11471023 -17533633 - PROTOP DNA P -4110 370 1 8 672 2965 37 5 5 chrUextra 11471023 11471408 -17533248 - Gypsy12_LTR LTR Gypsy -304 2032 1648 8 672 2767 164 16 8 chrUextra 11471513 11472256 -17532400 - SAR_DM Satellite Satellite -569 748 1 8 672 435 19 0 0 chrUextra 11472356 11472408 -17532248 + Gypsy12_I LTR Gypsy 5495 5546 0 8 672 6361 3 0 0 chrUextra 11472408 11473104 -17531552 + Gypsy12_LTR LTR Gypsy 1 696 -1640 8 672 6779 4 0 0 chrUextra 11473204 11473952 -17530704 - R1_DM LINE R1 -381 4975 4228 8 672 304 161 18 18 chrUextra 11474053 11474110 -17530546 + HETRP_DM Satellite Satellite 1619 1675 -197 8 672 238 208 0 19 chrUextra 11474162 11474216 -17530440 + HETRP_DM Satellite Satellite 1580 1632 -240 8 672 307 185 250 42 chrUextra 11474263 11474359 -17530297 + HETRP_DM Satellite Satellite 1519 1634 -238 8 672 838 171 12 19 chrUextra 11474407 11474568 -17530088 + HETRP_DM Satellite Satellite 1516 1675 -197 8 672 228 159 0 83 chrUextra 11474722 11474770 -17529886 + HETRP_DM Satellite Satellite 1519 1562 -310 8 672 710 47 0 0 chrUextra 11474900 11474986 -17529670 + Gypsy6A_LTR LTR Gypsy 335 420 0 8 672 863 63 16 16 chrUextra 11474992 11475121 -17529535 + PROTOP DNA P 3346 3474 -1006 8 672 843 103 145 6 chrUextra 11475159 11475325 -17529331 + PROTOP DNA P 3726 3914 -566 8 672 1081 146 26 2 chrUextra 11475333 11475642 -17529014 - DNAREP1_DM LINE Penelope -262 332 123 8 672 6213 0 0 35 chrUextra 11475748 11476496 -17528160 - LSU-rRNA_Dme rRNA rRNA -3062 838 117 8 672 21 89 0 0 chrUextra 11476700 11476756 -17527900 + AT_rich Low_complexity Low_complexity 1 56 0 8 672 5195 2 2 0 chrUextra 11476775 11477344 -17527312 - SSU-rRNA_Dme rRNA rRNA 0 1995 1426 8 672 6030 48 8 3 chrUextra 11477444 11478192 -17526464 + DIVER_I LTR Pao 212 963 -4680 8 672 3568 173 9 11 chrUextra 11478292 11479040 -17525616 + SAR_DM Satellite Satellite 256 1002 -470 8 672 6546 7 0 1 chrUextra 11479140 11479888 -17524768 - PROTOP DNA P -906 3574 2828 8 672 6812 3 0 0 chrUextra 11479988 11480736 -17523920 + DOC LINE Jockey 3631 4378 -347 8 672 3618 7 2 2 chrUextra 11480836 11481252 -17523404 - ACCORD_I LTR Gypsy -5872 416 1 8 672 3017 0 0 0 chrUextra 11481252 11481584 -17523072 - ACCORD_LTR LTR Gypsy 0 558 227 8 672 6825 0 1 1 chrUextra 11481684 11482432 -17522224 - LSU-rRNA_Dme rRNA rRNA -268 3632 2885 8 672 3030 213 56 20 chrUextra 11482540 11483278 -17521378 + HETA LINE telomeric 594 1357 -4724 8 672 3140 185 7 14 chrUextra 11483380 11484094 -17520562 - SAR_DM Satellite Satellite -572 900 192 8 672 838 92 0 8 chrUextra 11483997 11484128 -17520528 + ARS406_DM Unknown Unknown 1 130 -223 8 672 3243 168 14 20 chrUextra 11484233 11484942 -17519714 - SAR_DM Satellite Satellite -577 895 191 8 672 47 0 0 0 chrUextra 11485403 11485450 -17519206 + AT_rich Low_complexity Low_complexity 1 47 0 8 672 606 28 0 14 chrUextra 11485924 11485997 -17518659 + PROTOP DNA P 4407 4479 -1 8 672 26 30 0 0 chrUextra 11486379 11486412 -17518244 + AT_rich Low_complexity Low_complexity 1 33 0 8 672 29 60 0 0 chrUextra 11486452 11486502 -17518154 + AT_rich Low_complexity Low_complexity 1 50 0 8 672 3125 179 24 26 chrUextra 11486772 11487514 -17517142 + SAR_DM Satellite Satellite 432 1172 -300 8 672 2412 0 0 0 chrUextra 11487620 11487889 -17516767 + HMSBEAGLE_I LTR Gypsy 6261 6529 0 8 672 2421 8 0 0 chrUextra 11487889 11488155 -17516501 + DMLTR5 LTR Gypsy 1 266 0 8 672 1002 143 0 0 chrUextra 11488155 11488330 -17516326 + (TA)n Simple_repeat Simple_repeat 2 176 0 8 672 5768 58 3 4 chrUextra 11488469 11489216 -17515440 - IDEFIX_I LTR Gypsy -2639 2989 2244 8 672 6597 16 0 0 chrUextra 11489316 11490064 -17514592 + R1_DM LINE R1 4007 4754 -602 8 672 6507 5 1 0 chrUextra 11490164 11490912 -17513744 + QUASIMODO_I LTR Gypsy 2839 3587 -2473 8 672 1384 0 0 0 chrUextra 11491012 11491167 -17513489 - ALUII_DM Unknown Unknown -85 155 1 8 672 21 57 0 0 chrUextra 11491167 11491202 -17513454 + AT_rich Low_complexity Low_complexity 1 35 0 8 672 22 35 0 0 chrUextra 11491396 11491425 -17513231 + AT_rich Low_complexity Low_complexity 1 29 0 8 672 37 39 0 0 chrUextra 11491526 11491577 -17513079 + AT_rich Low_complexity Low_complexity 1 51 0 8 672 2554 98 40 27 chrUextra 11491874 11492607 -17512049 + DMSAT6 Satellite Satellite 1 742 0 8 672 6753 5 0 0 chrUextra 11492708 11493456 -17511200 + R1_DM LINE R1 1979 2726 -2630 8 672 2111 4 0 0 chrUextra 11493556 11493791 -17510865 + R2_DM LINE R2 3369 3603 -4 8 672 4606 8 2 0 chrUextra 11493787 11494304 -17510352 + LSU-rRNA_Dme rRNA rRNA 2578 3095 -805 8 672 5433 48 38 0 chrUextra 11494404 11495149 -17509507 - DM297_I LTR Gypsy -2044 4123 3351 8 672 6658 1 0 0 chrUextra 11495252 11496000 -17508656 - DM176_I LTR Gypsy -3064 3356 2609 8 672 34 24 0 0 chrUextra 11496506 11496547 -17508109 + AT_rich Low_complexity Low_complexity 1 41 0 8 672 21 95 0 0 chrUextra 11496760 11496823 -17507833 + AT_rich Low_complexity Low_complexity 1 63 0 8 672 6817 3 1 0 chrUextra 11496948 11497696 -17506960 - LSU-rRNA_Dme rRNA rRNA -3 3897 3149 8 672 253 0 0 86 chrUextra 11497796 11497831 -17506825 - NTS_DM Other Other -184 56 25 8 672 22 56 0 0 chrUextra 11497857 11497893 -17506763 + AT_rich Low_complexity Low_complexity 1 36 0 8 672 239 125 0 24 chrUextra 11497906 11497947 -17506709 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 262 150 0 0 chrUextra 11497990 11498030 -17506626 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 262 150 0 0 chrUextra 11498082 11498122 -17506534 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 262 150 0 0 chrUextra 11498174 11498214 -17506442 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 22 56 0 0 chrUextra 11498219 11498255 -17506401 + AT_rich Low_complexity Low_complexity 1 36 0 8 672 1959 5 0 0 chrUextra 11498327 11498544 -17506112 - LSU-rRNA_Dme rRNA rRNA 0 3900 3684 8 672 1834 0 0 0 chrUextra 11498644 11498843 -17505813 + ROO_LTR LTR Pao 230 428 0 8 672 982 307 3 8 chrUextra 11499492 11499873 -17504783 - MDG3_I LTR Gypsy -915 4071 3693 8 672 381 248 0 0 chrUextra 11499888 11499989 -17504667 - MDG3_I LTR Gypsy -1347 3639 3539 8 672 464 301 6 11 chrUextra 11500018 11500196 -17504460 - MDG3_I LTR Gypsy -1478 3508 3332 8 672 2532 103 28 18 chrUextra 11500340 11501082 -17503574 + DMSAT6 Satellite Satellite 1 750 -108 8 672 6420 16 7 1 chrUextra 11501188 11501936 -17502720 - DOC2_DM LINE Jockey -1091 3702 2951 8 672 4640 13 0 2 chrUextra 11502036 11502570 -17502086 + FW_DM LINE Jockey 4150 4682 -10 8 672 28 48 0 0 chrUextra 11502895 11502937 -17501719 + AT_rich Low_complexity Low_complexity 1 42 0 8 672 514 119 36 0 chrUextra 11503211 11503295 -17501361 - NTS_DM Other Other -150 90 4 8 672 1355 6 0 18 chrUextra 11503405 11503570 -17501086 - NTS_DM Other Other -78 162 1 8 672 388 0 65 48 chrUextra 11503570 11503632 -17501024 - NTS_DM Other Other 0 240 178 8 672 2990 79 65 15 chrUextra 11503732 11504480 -17500176 + Gypsy12_I LTR Gypsy 4753 5538 -8 8 672 28 48 0 0 chrUextra 11504787 11504829 -17499827 + AT_rich Low_complexity Low_complexity 1 42 0 8 672 514 119 36 0 chrUextra 11505102 11505186 -17499470 - NTS_DM Other Other -150 90 4 8 672 3537 172 21 9 chrUextra 11505428 11506173 -17498483 + SAR_DM Satellite Satellite 284 1037 -435 8 672 808 307 37 29 chrUextra 11506277 11506652 -17498004 + Gypsy4_I LTR Gypsy 2372 3148 -3424 8 672 1556 24 19 0 chrUextra 11506652 11506864 -17497792 + TLD2 Unknown Unknown 1 216 -2 8 672 808 307 37 29 chrUextra 11506864 11506982 -17497674 + Gypsy4_I LTR Gypsy 3149 3397 -3175 8 672 3753 151 11 8 chrUextra 11507142 11507871 -17496785 + SAR_DM Satellite Satellite 326 1056 -416 8 672 6717 1 0 1 chrUextra 11507972 11508720 -17495936 - DOC LINE Jockey -2050 2675 1929 8 672 28 48 0 0 chrUextra 11508906 11508948 -17495708 + AT_rich Low_complexity Low_complexity 1 42 0 8 672 513 129 24 0 chrUextra 11509221 11509306 -17495350 - NTS_DM Other Other -150 90 4 8 672 1200 7 7 20 chrUextra 11509416 11509568 -17495088 - NTS_DM Other Other -78 162 13 8 672 3812 9 0 0 chrUextra 11509668 11510096 -17494560 + FW_DM LINE Jockey 606 1033 -3659 8 672 2780 22 0 0 chrUextra 11510094 11510416 -17494240 + FW_DM LINE Jockey 1271 1592 -3100 8 672 4755 2 0 2 chrUextra 11510516 11511042 -17493614 + R1_DM LINE R1 4832 5356 0 8 672 2018 9 0 0 chrUextra 11511040 11511264 -17493392 + LSU-rRNA_Dme rRNA rRNA 2640 2863 -1037 8 672 6729 3 1 0 chrUextra 11511364 11512112 -17492544 + ROO_I LTR Pao 7074 7822 -434 8 672 3727 270 16 28 chrUextra 11512221 11513808 -17490848 + SAR_DM Satellite Satellite 1 1567 -216 8 672 6131 12 0 40 chrUextra 11513908 11514656 -17490000 - CIRCE LINE Composite -2014 4342 3625 8 672 1582 108 0 91 chrUextra 11514756 11515042 -17489614 - R1_DM LINE R1 -4523 833 574 8 672 819 120 83 60 chrUextra 11515043 11515211 -17489445 - R1_DM LINE R1 -5184 172 1 8 672 1953 64 4 36 chrUextra 11515229 11515504 -17489152 + Gypsy6A_LTR LTR Gypsy 71 336 -84 8 672 6694 1 1 1 chrUextra 11515604 11516345 -17488311 + LSU-rRNA_Dme rRNA rRNA 1892 2632 -1268 8 672 6723 4 0 0 chrUextra 11516452 11517200 -17487456 + DOC LINE Jockey 1841 2588 -2137 8 672 293 172 16 0 chrUextra 11517303 11517367 -17487289 + XDMR Unknown Unknown 297 361 0 8 672 3294 178 9 20 chrUextra 11517312 11518048 -17486608 - SAR_DM Satellite Satellite -354 1118 391 8 672 4449 2 0 0 chrUextra 11518148 11518637 -17486019 + LSU-rRNA_Dme rRNA rRNA 2158 2646 -1254 8 672 2355 0 0 0 chrUextra 11518635 11518896 -17485760 + R1_DM LINE R1 2994 3254 -2102 8 672 3237 184 7 10 chrUextra 11518996 11519717 -17484939 - SAR_DM Satellite Satellite -559 913 195 8 672 836 83 0 0 chrUextra 11519624 11519744 -17484912 + ARS406_DM Unknown Unknown 1 120 -233 8 672 6027 0 0 0 chrUextra 11519844 11520514 -17484142 + BARI_DM DNA Tc1 1058 1727 -1 8 672 678 0 13 0 chrUextra 11520514 11520592 -17484064 + BARI_DM DNA Tc1 4 82 -1646 8 672 6650 0 0 3 chrUextra 11520692 11521440 -17483216 + ROO_I LTR Pao 1955 2700 -5556 8 672 3378 185 8 9 chrUextra 11521540 11522286 -17482370 - SAR_DM Satellite Satellite -446 1026 282 8 672 6630 1 13 0 chrUextra 11522388 11523136 -17481520 - DMRT1B LINE R1 -2261 2922 2165 8 672 3501 169 10 8 chrUextra 11523252 11523982 -17480674 + SAR_DM Satellite Satellite 326 1056 -416 8 672 6581 18 0 4 chrUextra 11524084 11524832 -17479824 - BATUMI_I LTR Pao -1986 5977 5233 8 672 1000 0 0 0 chrUextra 11524932 11525042 -17479614 - DOC LINE Jockey -4614 111 2 8 672 703 248 36 73 chrUextra 11525128 11525458 -17479198 + Gypsy12_LTR LTR Gypsy 832 1149 -1187 8 672 402 244 79 30 chrUextra 11525479 11525679 -17478977 + Gypsy12_LTR LTR Gypsy 1643 1883 -453 8 672 1017 86 40 0 chrUextra 11525780 11525931 -17478725 - ROVER-LTR_DM LTR Gypsy -210 157 1 8 672 1705 158 55 13 chrUextra 11525939 11526336 -17478320 - ROVER-I_DM LTR Gypsy -18 6566 6153 8 672 3214 189 8 16 chrUextra 11526628 11527367 -17477289 + SAR_DM Satellite Satellite 387 1119 -353 8 672 283 175 32 0 chrUextra 11527313 11527376 -17477280 - XDMR Unknown Unknown 0 361 297 8 672 311 0 0 0 chrUextra 11527476 11527511 -17477145 + STALKER4_I LTR Gypsy 6496 6530 0 8 672 3164 51 25 15 chrUextra 11527511 11527940 -17476716 + STALKER4_LTR LTR Gypsy 1 391 -11 8 672 854 139 12 146 chrUextra 11527968 11528221 -17476435 - Gypsy12_LTR LTR Gypsy -845 1491 1273 8 672 2964 3 0 0 chrUextra 11528323 11528653 -17476003 - Invader3_I LTR Gypsy -4558 330 1 8 672 2487 7 42 0 chrUextra 11528653 11528939 -17475717 - Invader3_LTR LTR Gypsy 0 298 1 8 672 1025 15 23 0 chrUextra 11528939 11529070 -17475586 - Invader3_I LTR Gypsy 0 4888 4755 8 672 6488 1 1 0 chrUextra 11529170 11529917 -17474739 + DM176_I LTR Gypsy 1784 2531 -3889 8 672 6571 9 8 0 chrUextra 11530017 11530764 -17473892 + Copia2_I LTR Copia 203 955 -3207 8 672 5800 22 16 4 chrUextra 11530867 11531611 -17473045 + MDG1_I LTR Gypsy 619 1371 -5225 8 672 974 73 5 14 chrUextra 11531711 11532450 -17472206 + RSP Satellite Satellite 1 732 0 8 672 21 95 0 0 chrUextra 11533645 11533708 -17470948 + AT_rich Low_complexity Low_complexity 1 63 0 8 672 3407 2 0 62 chrUextra 11533720 11534152 -17470504 + LSU-rRNA_Dme rRNA rRNA 1 405 -3495 8 10 1335 24 0 6 chrUextra 11534254 11534424 -17470232 - NTS_DM Other Other -34 206 38 8 673 851 0 0 0 chrUextra 11534424 11534520 -17470136 - NTS_DM Other Other -107 133 38 8 673 840 9 9 36 chrUextra 11534520 11534632 -17470024 - NTS_DM Other Other -107 133 25 8 673 21 57 0 0 chrUextra 11534658 11534693 -17469963 + AT_rich Low_complexity Low_complexity 1 35 0 8 673 1304 18 0 6 chrUextra 11534693 11534858 -17469798 - NTS_DM Other Other -39 201 38 8 673 907 9 0 27 chrUextra 11534858 11534970 -17469686 - NTS_DM Other Other -107 133 25 8 673 1134 0 0 0 chrUextra 11535101 11535225 -17469431 - DOC LINE Jockey -4599 126 3 8 673 721 60 0 0 chrUextra 11535221 11535321 -17469335 + ARS406_DM Unknown Unknown 59 158 -195 8 673 2550 175 17 6 chrUextra 11535318 11535846 -17468810 - SAR_DM Satellite Satellite -558 914 381 8 673 1323 124 0 14 chrUextra 11535947 11536167 -17468489 + DMSAT6 Satellite Satellite 254 470 0 8 673 2519 100 8 61 chrUextra 11536188 11536680 -17467976 + DMSAT6 Satellite Satellite 5 470 0 8 673 6551 7 0 0 chrUextra 11536793 11537540 -17467116 + Invader2_I LTR Gypsy 946 1692 -2900 8 673 6440 3 0 1 chrUextra 11537640 11538387 -17466269 - STALKER4_I LTR Gypsy -3090 3440 2695 8 673 6172 42 4 0 chrUextra 11538487 11539234 -17465422 + R1_DM LINE R1 1169 1918 -3438 8 673 624 133 0 9 chrUextra 11539334 11539448 -17465208 - ARS406_DM Unknown Unknown -240 113 1 8 673 3173 185 28 11 chrUextra 11539354 11540081 -17464575 + SAR_DM Satellite Satellite 195 933 -539 8 673 3093 186 16 30 chrUextra 11540181 11540928 -17463728 + SAR_DM Satellite Satellite 436 1172 -300 8 673 307 25 25 0 chrUextra 11541041 11541081 -17463575 + TART LINE telomeric 10628 10668 -3809 8 673 2663 203 44 43 chrUextra 11541075 11541775 -17462881 + TAHRE LINE telomeric 7171 7871 -2592 8 673 25 48 0 46 chrUextra 11542938 11543003 -17461653 + AT_rich Low_complexity Low_complexity 1 62 0 8 673 3279 16 3 0 chrUextra 11543569 11543946 -17460710 + R1_DM LINE R1 4979 5356 0 8 673 2586 60 6 6 chrUextra 11543979 11544316 -17460340 + R1_DM LINE R1 1 337 -5019 8 673 6578 1 0 0 chrUextra 11544416 11545163 -17459493 + TABOR_I LTR Gypsy 1546 2292 -4044 8 673 2894 6 47 0 chrUextra 11545263 11545606 -17459050 + IDEFIX_LTR LTR Gypsy 236 594 0 8 673 229 270 67 67 chrUextra 11545709 11545919 -17458737 + TIRANT_I LTR Gypsy 5093 5302 -2390 8 673 3199 183 39 12 chrUextra 11546112 11546857 -17457799 + SAR_DM Satellite Satellite 259 1023 -449 8 673 710 192 175 52 chrUextra 11546980 11547314 -17457342 + TART LINE telomeric 10116 10491 -3986 8 673 2083 33 96 4 chrUextra 11547432 11547704 -17456952 + PROTOP DNA P 1 297 -4183 8 673 2096 40 0 0 chrUextra 11547805 11548052 -17456604 + PROTOP DNA P 4234 4480 0 8 673 6318 23 7 1 chrUextra 11548651 11549398 -17455258 - R1_DM LINE R1 -2141 3215 2465 8 673 3642 76 45 25 chrUextra 11549514 11550186 -17454470 + PROTOP_A DNA P 520 1153 0 8 673 6597 1 0 0 chrUextra 11550345 11551088 -17453568 + DM176_I LTR Gypsy 3620 4362 -2058 8 673 3714 100 69 36 chrUextra 11551192 11551925 -17452731 - STALKER4_I LTR Gypsy -5225 1305 485 8 673 6430 20 4 1 chrUextra 11552039 11552786 -17451870 - R1_DM LINE R1 -1513 3843 3095 8 673 3548 3 0 0 chrUextra 11552886 11553274 -17451382 + ROO_LTR LTR Pao 41 428 0 8 673 2101 192 74 31 chrUextra 11553900 11554480 -17450176 + STALKER4_I LTR Gypsy 885 1489 -5041 8 673 485 0 0 0 chrUextra 11554580 11554633 -17450023 - NTS_DM Other Other -150 90 38 8 673 907 9 0 27 chrUextra 11554633 11554745 -17449911 - NTS_DM Other Other -107 133 25 8 673 1304 18 0 6 chrUextra 11554797 11554962 -17449694 - NTS_DM Other Other -39 201 38 8 673 907 9 0 27 chrUextra 11554962 11555074 -17449582 - NTS_DM Other Other -107 133 25 8 673 22 56 0 0 chrUextra 11555100 11555136 -17449520 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 269 125 0 0 chrUextra 11555149 11555189 -17449467 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 239 175 0 0 chrUextra 11555232 11555272 -17449384 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 514 119 36 0 chrUextra 11555631 11555715 -17448941 - NTS_DM Other Other -150 90 4 8 673 1355 6 0 18 chrUextra 11555825 11555990 -17448666 - NTS_DM Other Other -78 162 1 8 673 1377 6 22 16 chrUextra 11555990 11556174 -17448482 - NTS_DM Other Other 0 240 56 8 673 3652 23 0 11 chrUextra 11556274 11556707 -17447949 - BATUMI_I LTR Pao -1864 6099 5672 8 673 2745 3 0 0 chrUextra 11556705 11557021 -17447635 - BATUMI_I LTR Pao -2648 5315 5000 8 673 6044 12 1 1 chrUextra 11557121 11557868 -17446788 - ROO_I LTR Pao -4579 3677 2931 8 673 5278 51 44 1 chrUextra 11558815 11559562 -17445094 + I_DM LINE I 261 1039 -5192 8 673 6180 18 0 12 chrUextra 11559662 11560409 -17444247 - Gypsy12_I LTR Gypsy -43 5503 4766 8 673 3923 14 27 0 chrUextra 11560509 11560996 -17443660 - IDEFIX_LTR LTR Gypsy -94 500 1 8 673 1748 77 0 0 chrUextra 11560996 11561255 -17443401 - IDEFIX_I LTR Gypsy -1443 4185 3927 8 673 3039 184 23 8 chrUextra 11561360 11562103 -17442553 - SAR_DM Satellite Satellite -435 1037 284 8 673 521 324 13 42 chrUextra 11562409 11562715 -17441941 + HMSBEAGLE_I LTR Gypsy 2650 2946 -3583 8 673 266 178 0 0 chrUextra 11562905 11562950 -17441706 + HMSBEAGLE_I LTR Gypsy 3177 3221 -3308 8 673 6173 12 7 0 chrUextra 11563897 11564644 -17440012 - QUASIMODO_I LTR Gypsy -2789 3271 2520 8 673 5047 22 5 6 chrUextra 11564850 11565491 -17439165 - PROTOP_A DNA P 0 1105 466 8 673 5699 29 10 7 chrUextra 11565613 11566338 -17438318 - CIRCE LINE Composite -3619 2737 2011 8 673 469 321 18 18 chrUextra 11566903 11567185 -17437471 - Gypsy4_I LTR Gypsy -2815 3473 3192 8 673 654 309 41 39 chrUextra 11567290 11567930 -17436726 + SAR_DM Satellite Satellite 269 909 -563 8 673 508 272 29 26 chrUextra 11567712 11568021 -17436635 - XDMR_DM Unknown Unknown -9 351 42 8 673 5613 31 56 16 chrUextra 11568132 11568879 -17435777 + CIRCE LINE Composite 2275 3051 -3305 8 673 6505 0 0 0 chrUextra 11568979 11569726 -17434930 - FW_DM LINE Jockey -2010 2682 1936 8 673 1252 18 0 6 chrUextra 11569856 11570021 -17434635 - NTS_DM Other Other -39 201 38 8 673 852 18 0 27 chrUextra 11570021 11570133 -17434523 - NTS_DM Other Other -107 133 25 8 673 1252 18 0 6 chrUextra 11570185 11570350 -17434306 - NTS_DM Other Other -39 201 38 8 673 870 9 0 27 chrUextra 11570350 11570462 -17434194 - NTS_DM Other Other -107 133 25 8 673 385 35 0 17 chrUextra 11570514 11570573 -17434083 - NTS_DM Other Other -39 201 144 8 673 5794 45 0 0 chrUextra 11570673 11571420 -17433236 - IDEFIX_I LTR Gypsy -2766 2862 2116 8 673 5214 92 3 5 chrUextra 11571520 11572267 -17432389 - Gypsy12_I LTR Gypsy -3479 2067 1323 8 673 6291 0 0 1 chrUextra 11572367 11573114 -17431542 - ROO_I LTR Pao -4321 3935 3190 8 673 1748 0 5 0 chrUextra 11573214 11573422 -17431234 - BLOOD_I LTR Gypsy -6404 209 1 8 673 3466 8 0 0 chrUextra 11573422 11573821 -17430835 - BLOOD_LTR LTR Gypsy 0 399 1 8 673 426 237 0 0 chrUextra 11573822 11573961 -17430695 + (TTTG)n Simple_repeat Simple_repeat 4 142 0 8 673 5952 0 0 35 chrUextra 11574061 11574808 -17429848 + LSU-rRNA_Dme rRNA rRNA 108 828 -3072 8 673 21 89 0 0 chrUextra 11575355 11575411 -17429245 + AT_rich Low_complexity Low_complexity 1 56 0 8 673 23 68 0 0 chrUextra 11575449 11575493 -17429163 + AT_rich Low_complexity Low_complexity 1 44 0 8 673 26 30 0 0 chrUextra 11575536 11575569 -17429087 + AT_rich Low_complexity Low_complexity 1 33 0 8 673 6461 3 0 0 chrUextra 11575755 11576502 -17428154 - R1_DM LINE R1 -523 4833 4087 8 673 1266 37 0 0 chrUextra 11576602 11576763 -17427893 - R1_DM LINE R1 -3640 1716 1556 8 673 1664 56 0 0 chrUextra 11576774 11576987 -17427669 - R1_DM LINE R1 -3897 1459 1247 8 673 2619 56 0 8 chrUextra 11576989 11577347 -17427309 - R1_DM LINE R1 -4745 611 257 8 673 2878 155 29 28 chrUextra 11577481 11578196 -17426460 + Gypsy8_I LTR Gypsy 1035 1489 -2858 8 673 1599 45 3 0 chrUextra 11578296 11578608 -17426048 + (CTATT)n Simple_repeat Simple_repeat 1 312 0 8 673 608 56 11 0 chrUextra 11578624 11578713 -17425943 + (CTATT)n Simple_repeat Simple_repeat 3 92 0 8 673 1287 63 0 0 chrUextra 11578760 11578934 -17425722 + (CTATT)n Simple_repeat Simple_repeat 4 177 0 8 673 687 44 0 0 chrUextra 11578952 11579043 -17425613 + (CTATT)n Simple_repeat Simple_repeat 2 92 0 8 673 1937 248 21 70 chrUextra 11579144 11579890 -17424766 - Gypsy12_LTR LTR Gypsy -1447 889 180 8 673 549 0 0 0 chrUextra 11579990 11580051 -17424605 + (CACAA)n Simple_repeat Simple_repeat 2 62 0 8 673 5730 6 32 0 chrUextra 11580051 11580731 -17423925 + DMRT1B LINE R1 4482 5183 0 8 673 5444 24 91 0 chrUextra 11580837 11581584 -17423072 - R1_DM LINE R1 -1562 3794 2980 8 673 6362 0 1 0 chrUextra 11581687 11582431 -17422225 + BLOOD_I LTR Gypsy 2240 2984 -3629 8 673 6472 1 0 0 chrUextra 11582534 11583278 -17421378 - STALKER4_I LTR Gypsy -2043 4487 3744 8 673 22 35 0 0 chrUextra 11583727 11583756 -17420900 + AT_rich Low_complexity Low_complexity 1 29 0 8 673 268 329 19 25 chrUextra 11583949 11584111 -17420545 + HMSBEAGLE_I LTR Gypsy 1451 1611 -4918 8 673 2881 174 31 27 chrUextra 11584225 11584968 -17419688 + SAR_DM Satellite Satellite 445 1190 -282 8 673 3070 186 8 19 chrUextra 11585075 11585819 -17418837 + SAR_DM Satellite Satellite 282 1017 -455 8 673 6214 20 1 0 chrUextra 11585919 11586666 -17417990 - R1_DM LINE R1 -318 5038 4291 8 673 3689 2 5 0 chrUextra 11586768 11587201 -17417455 - LSU-rRNA_Dme rRNA rRNA -826 3074 2640 8 673 2673 0 0 6 chrUextra 11587199 11587513 -17417143 - R1_DM LINE R1 0 5356 5045 8 673 446 343 30 24 chrUextra 11587615 11587985 -17416671 - DIVER2_I LTR Pao -1811 2336 1965 8 673 319 343 21 25 chrUextra 11588089 11588325 -17416331 - DIVER2_I LTR Pao -2321 1826 1592 8 673 6471 1 0 0 chrUextra 11588460 11589207 -17415449 - Invader3_I LTR Gypsy -652 4236 3490 8 673 3813 9 0 0 chrUextra 11589309 11589751 -17414905 - Copia2_I LTR Copia -195 3967 3526 8 673 893 0 0 0 chrUextra 11590154 11590256 -17414400 - R1_DM LINE R1 -2024 3332 3231 8 673 3301 3 0 0 chrUextra 11590268 11590649 -17414007 - R1_DM LINE R1 0 5356 4976 8 673 666 12 0 35 chrUextra 11590645 11590731 -17413925 - NTS_DM Other Other -133 107 25 8 673 22 56 0 0 chrUextra 11590757 11590793 -17413863 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 243 125 0 0 chrUextra 11590806 11590846 -17413810 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 3610 7 0 0 chrUextra 11591001 11591426 -17413230 - FW_DM LINE Jockey -2997 1695 1271 8 673 2736 12 3 0 chrUextra 11591424 11591748 -17412908 - FW_DM LINE Jockey -3659 1033 709 8 673 2073 171 12 9 chrUextra 11591848 11592584 -17412072 - SAR_DM Satellite Satellite -419 737 1 8 673 1284 86 0 0 chrUextra 11592695 11592869 -17411787 + BS3_DM LINE Jockey 248 421 -1369 8 673 3855 66 4 0 chrUextra 11592869 11593386 -17411270 + BS3_DM LINE Jockey 526 1044 -746 8 673 346 167 15 0 chrUextra 11593376 11593442 -17411214 + BS3_DM LINE Jockey 1311 1377 -413 8 673 228 122 24 0 chrUextra 11593907 11593948 -17410708 + PROTOP DNA P 874 915 -3565 8 673 460 176 392 0 chrUextra 11593947 11594156 -17410500 + PROTOP DNA P 3959 4248 -232 8 673 3221 152 15 31 chrUextra 11594398 11595117 -17409539 - SAR_DM Satellite Satellite -396 1076 369 8 673 455 0 0 18 chrUextra 11595236 11595293 -17409363 + STALKER4_LTR LTR Gypsy 347 402 0 8 673 589 39 0 0 chrUextra 11595312 11595389 -17409267 + ROOA_I LTR Pao 2393 2469 -4380 8 673 2063 16 0 0 chrUextra 11595414 11595661 -17408995 + ROOA_I LTR Pao 2551 2797 -4052 8 673 2580 26 0 0 chrUextra 11595673 11595983 -17408673 + ROOA_I LTR Pao 2869 3178 -3671 8 673 1048 65 0 0 chrUextra 11596083 11596222 -17408434 + R1_DM LINE R1 1321 1459 -3897 8 673 4140 22 4 0 chrUextra 11596233 11596741 -17407915 + R1_DM LINE R1 1556 2065 -3291 8 673 677 35 0 0 chrUextra 11596743 11596830 -17407826 + R1_DM LINE R1 2394 2480 -2876 8 673 3442 236 17 16 chrUextra 11596934 11598497 -17406159 + SAR_DM Satellite Satellite 1 1565 -208 8 673 5939 9 1 0 chrUextra 11598681 11599371 -17405285 - LSU-rRNA_Dme rRNA rRNA -7 3893 3203 8 673 644 186 7 14 chrUextra 11599550 11599692 -17404964 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 657 186 7 14 chrUextra 11599830 11599972 -17404684 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 404 252 0 9 chrUextra 11600110 11600218 -17404438 - HETRP_DM Satellite Satellite -203 1669 1563 8 673 811 53 0 0 chrUextra 11600318 11600431 -17404225 - IVK_DM LINE I -1373 4029 3917 8 673 3143 144 27 29 chrUextra 11600435 11601065 -17403591 + Gypsy12_LTR LTR Gypsy 1706 2334 -2 8 673 3304 154 47 24 chrUextra 11601165 11601910 -17402746 - TART LINE telomeric -4764 9713 8952 8 673 6343 12 0 0 chrUextra 11602012 11602759 -17401897 - R1_DM LINE R1 -3294 2062 1316 8 673 2876 193 11 10 chrUextra 11602861 11603593 -17401063 + SAR_DM Satellite Satellite 205 937 -535 8 673 2849 188 18 14 chrUextra 11603706 11604451 -17400205 + SAR_DM Satellite Satellite 1 747 -262 8 673 5948 38 1 0 chrUextra 11604556 11605299 -17399357 + R1_DM LINE R1 1157 1900 -3456 8 673 3188 174 11 12 chrUextra 11605399 11606145 -17398511 - SAR_DM Satellite Satellite -444 1028 284 8 673 6123 7 0 3 chrUextra 11606245 11606991 -17397665 + DM176_I LTR Gypsy 1533 2276 -4144 8 673 1411 0 0 0 chrUextra 11607091 11607252 -17397404 + NOMAD_I LTR Gypsy 6412 6572 0 8 673 4527 0 0 0 chrUextra 11607252 11607770 -17396886 + NOMAD_LTR LTR Gypsy 1 518 0 8 673 243 0 134 0 chrUextra 11607770 11607837 -17396819 + (TA)n Simple_repeat Simple_repeat 1 76 0 8 673 5638 3 1 3 chrUextra 11607937 11608594 -17396062 + SSU-rRNA_Dme rRNA rRNA 1329 1984 -11 8 673 1120 236 0 21 chrUextra 11608783 11609073 -17395583 - Gypsy5_I LTR Gypsy -1329 5180 4897 8 673 539 251 50 18 chrUextra 11609093 11609312 -17395344 - Gypsy5_I LTR Gypsy -1672 4837 4612 8 673 951 174 0 0 chrUextra 11609312 11609490 -17395166 + CT-rich Low_complexity Low_complexity 1 178 0 8 673 3149 46 24 0 chrUextra 11609629 11610040 -17394616 + TART_B1 LINE telomeric 3208 3628 -7026 8 673 2275 98 45 0 chrUextra 11610038 11610375 -17394281 + TART_B1 LINE telomeric 4415 4766 -5888 8 673 908 70 7 19 chrUextra 11610485 11611070 -17393586 - RSP Satellite Satellite 0 578 1 8 673 579 26 0 25 chrUextra 11611141 11611221 -17393435 - RSP Satellite Satellite 0 118 41 8 673 6007 25 1 1 chrUextra 11611321 11612067 -17392589 + R1_DM LINE R1 3696 4441 -915 8 673 1151 15 0 0 chrUextra 11612167 11612302 -17392354 - R2_DM LINE R2 -3471 136 2 8 673 5211 2 0 0 chrUextra 11612315 11612913 -17391743 - LSU-rRNA_Dme rRNA rRNA -1382 2518 1921 8 673 2260 0 4 0 chrUextra 11613061 11613336 -17391320 - Copia_LTR LTR Copia 0 276 1 8 673 2399 0 0 0 chrUextra 11613336 11613613 -17391043 - Copia_I LTR Copia 0 4593 4317 8 673 1144 0 7 0 chrUextra 11613613 11613759 -17390897 - Copia_I LTR Copia -2805 1788 1642 8 673 602 313 59 43 chrUextra 11613863 11614590 -17390066 + MDG1_I LTR Gypsy 2180 2918 -3678 8 673 1456 231 73 90 chrUextra 11614707 11615451 -17389205 + Gypsy12A_LTR LTR Gypsy 1348 2078 -202 8 673 6212 4 17 1 chrUextra 11615551 11616297 -17388359 + DOC2_DM LINE Jockey 2425 3182 -1611 8 673 6067 3 0 0 chrUextra 11616397 11617095 -17387561 - ROO_I LTR Pao -529 7727 7030 8 673 409 67 50 0 chrUextra 11617083 11617143 -17387513 - ROO_I LTR Pao -2475 5781 5719 8 673 572 0 0 0 chrUextra 11617243 11617309 -17387347 - LSU-rRNA_Dme rRNA rRNA -3834 66 1 8 673 21 95 0 0 chrUextra 11617321 11617384 -17387272 + AT_rich Low_complexity Low_complexity 1 63 0 8 673 34 24 0 0 chrUextra 11617597 11617638 -17387018 + AT_rich Low_complexity Low_complexity 1 41 0 8 673 1469 121 57 3 chrUextra 11618309 11618591 -17386065 - DNAREP1_DM LINE Penelope -297 297 1 8 673 5604 47 15 0 chrUextra 11618935 11619681 -17384975 + R1_DM LINE R1 368 1124 -4232 8 673 2694 204 10 12 chrUextra 11619786 11620504 -17384152 - SAR_DM Satellite Satellite -577 895 180 8 673 637 140 0 23 chrUextra 11620395 11620527 -17384129 + ARS406_DM Unknown Unknown 1 129 -224 8 673 876 24 0 8 chrUextra 11620627 11620755 -17383901 + NTS_DM Other Other 75 201 -39 8 673 870 9 0 27 chrUextra 11620807 11620919 -17383737 + NTS_DM Other Other 25 133 -107 8 673 1252 18 0 6 chrUextra 11620919 11621084 -17383572 + NTS_DM Other Other 38 201 -39 8 673 870 9 0 27 chrUextra 11621137 11621249 -17383407 + NTS_DM Other Other 25 133 -107 8 673 866 9 17 0 chrUextra 11621249 11621364 -17383292 + NTS_DM Other Other 38 154 -86 8 673 28 48 0 0 chrUextra 11621524 11621566 -17383090 + AT_rich Low_complexity Low_complexity 1 42 0 8 673 32 0 0 0 chrUextra 11621894 11621926 -17382730 + AT_rich Low_complexity Low_complexity 1 32 0 8 673 1382 6 0 0 chrUextra 11622058 11622219 -17382437 + SSU-rRNA_Dme rRNA rRNA 1 161 -1834 8 673 207 0 0 0 chrUextra 11623165 11623188 -17381468 + (TC)n Simple_repeat Simple_repeat 2 24 0 8 673 640 193 7 14 chrUextra 11623319 11623461 -17381195 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 629 193 7 14 chrUextra 11623596 11623738 -17380918 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 6034 20 1 0 chrUextra 11624015 11624753 -17379903 - Gypsy4_I LTR Gypsy -759 5529 4791 8 673 741 11 0 31 chrUextra 11625703 11625799 -17378857 - NTS_DM Other Other -123 117 25 8 673 22 56 0 0 chrUextra 11625825 11625861 -17378795 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 255 125 0 0 chrUextra 11625874 11625914 -17378742 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11625957 11625997 -17378659 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11626049 11626089 -17378567 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11626141 11626181 -17378475 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11626233 11626273 -17378383 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 29 28 0 0 chrUextra 11626278 11626314 -17378342 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 553 0 0 0 chrUextra 11626386 11626449 -17378207 - LSU-rRNA_Dme rRNA rRNA 0 3900 3838 8 673 2796 0 0 0 chrUextra 11626549 11626874 -17377782 - R1_DM LINE R1 -2175 3181 2857 8 673 6838 51 0 61 chrUextra 11626869 11627792 -17376864 - LSU-rRNA_Dme rRNA rRNA -1246 2654 1788 8 673 2535 0 7 3 chrUextra 11627836 11628141 -17376515 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1483 8 673 2965 172 14 21 chrUextra 11628241 11628987 -17375669 + SAR_DM Satellite Satellite 1 740 -281 8 673 6297 3 1 0 chrUextra 11629087 11629833 -17374823 + ROO_I LTR Pao 3571 4317 -3939 8 673 1527 0 0 0 chrUextra 11629933 11630107 -17374549 + R1_DM LINE R1 5183 5356 0 8 673 5025 2 0 0 chrUextra 11630105 11630679 -17373977 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 8 673 360 78 188 0 chrUextra 11630779 11630843 -17373813 - Gypsy12_I LTR Gypsy -1076 4470 4395 8 673 701 154 4 42 chrUextra 11630827 11631011 -17373645 - Gypsy12_I LTR Gypsy -4853 693 459 8 673 1772 90 20 17 chrUextra 11631024 11631317 -17373339 - Gypsy12_I LTR Gypsy -5206 340 47 8 673 789 193 24 24 chrUextra 11631314 11631521 -17373135 - Gypsy12_LTR LTR Gypsy -1938 398 192 8 673 2823 70 5 17 chrUextra 11631626 11632032 -17372624 - Baggins1 LINE LOA -262 5191 4791 8 673 364 102 0 0 chrUextra 11632471 11632530 -17372126 + HETA LINE telomeric 1499 1557 -4524 8 673 1739 73 50 8 chrUextra 11632529 11632791 -17371865 + HETA LINE telomeric 1894 2166 -3915 8 673 2768 101 16 5 chrUextra 11632789 11633217 -17371439 + HETA LINE telomeric 2429 2861 -3220 8 673 344 185 42 100 chrUextra 11633469 11633589 -17371067 - Copia_I LTR Copia -80 4513 4401 8 673 22 56 0 0 chrUextra 11633634 11633670 -17370986 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 1079 186 60 12 chrUextra 11633813 11634063 -17370593 + HETA LINE telomeric 4031 4292 -1789 8 673 6406 0 1 4 chrUextra 11634163 11634909 -17369747 + SSU-rRNA_Dme rRNA rRNA 747 1490 -505 8 673 846 10 0 0 chrUextra 11635855 11635954 -17368702 + BATUMI_I LTR Pao 7188 7286 -677 8 673 2643 143 1 2 chrUextra 11635945 11636601 -17368055 + G_DM LINE Jockey 622 1274 -768 8 673 6376 1 1 0 chrUextra 11636701 11637447 -17367209 + ROO_I LTR Pao 5249 5995 -2261 8 673 346 44 0 0 chrUextra 11638247 11638292 -17366364 + PROTOP_B DNA P 1 45 -1108 8 673 4417 2 0 2 chrUextra 11638395 11638905 -17365751 - LSU-rRNA_Dme rRNA rRNA -1604 2296 1788 8 673 1534 0 11 5 chrUextra 11638949 11639139 -17365517 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1598 8 673 6286 5 0 7 chrUextra 11639239 11639985 -17364671 - DM412 LTR Gypsy -6083 814 74 8 673 5922 16 1 3 chrUextra 11640085 11640831 -17363825 + Invader2_I LTR Gypsy 3077 3821 -771 8 673 2907 187 26 20 chrUextra 11640939 11641675 -17362981 - SAR_DM Satellite Satellite -308 1164 425 8 673 6117 25 3 0 chrUextra 11641777 11642522 -17362134 - R1_DM LINE R1 -1561 3795 3049 8 673 5336 57 39 0 chrUextra 11642623 11643339 -17361317 + Baggins1 LINE LOA 4710 5453 0 8 673 706 265 34 81 chrUextra 11643527 11643934 -17360722 + Gypsy12_LTR LTR Gypsy 679 1066 -1270 8 673 988 166 28 9 chrUextra 11643957 11644170 -17360486 + Gypsy12_LTR LTR Gypsy 1158 1374 -962 8 673 3429 5 0 0 chrUextra 11644315 11644713 -17359943 + LSU-rRNA_Dme rRNA rRNA 2185 2582 -1318 8 673 2985 3 0 0 chrUextra 11644717 11645061 -17359595 + R2_DM LINE R2 985 1328 -2279 8 673 2472 113 10 10 chrUextra 11645193 11645907 -17358749 + DMSAT6 Satellite Satellite 1 714 0 8 673 2316 98 20 14 chrUextra 11646010 11646723 -17357933 - DMSAT6 Satellite Satellite -71 716 1 8 673 5657 50 0 0 chrUextra 11646853 11647599 -17357057 + STALKER4_I LTR Gypsy 4978 5723 -807 8 673 28 48 0 0 chrUextra 11648035 11648077 -17356579 + AT_rich Low_complexity Low_complexity 1 42 0 8 673 427 132 48 0 chrUextra 11648350 11648433 -17356223 - NTS_DM Other Other -150 90 4 8 673 4061 75 23 1 chrUextra 11648554 11649291 -17355365 + STALKER4_I LTR Gypsy 3626 4456 -2441 8 673 898 86 35 58 chrUextra 11649409 11649581 -17355075 + DNAREP1_DM LINE Penelope 210 377 -217 8 673 239 184 289 0 chrUextra 11649579 11649655 -17355001 + DM176_I LTR Gypsy 4527 4624 -1796 8 673 1443 136 5 94 chrUextra 11649754 11650115 -17354541 + Gypsy8_LTR LTR Gypsy 1 304 0 8 673 335 62 0 0 chrUextra 11650089 11650137 -17354519 + Gypsy8_I LTR Gypsy 1 48 -4299 8 673 6344 3 1 1 chrUextra 11650237 11650983 -17353673 + FW_DM LINE Jockey 1316 2061 -2631 8 673 307 173 0 0 chrUextra 11651083 11651135 -17353521 - HETRP_DM Satellite Satellite -305 1567 1516 8 673 276 185 250 42 chrUextra 11651183 11651279 -17353377 - HETRP_DM Satellite Satellite -238 1634 1519 8 673 787 170 6 19 chrUextra 11651437 11651593 -17353063 - HETRP_DM Satellite Satellite -203 1669 1516 8 673 242 195 293 0 chrUextra 11651641 11651723 -17352933 - HETRP_DM Satellite Satellite -238 1634 1529 8 673 2263 75 18 41 chrUextra 11651932 11652673 -17351983 - DMSAT6 Satellite Satellite -151 723 1 8 673 3203 172 26 12 chrUextra 11652779 11653521 -17351135 + SAR_DM Satellite Satellite 267 1018 -454 8 673 3056 33 26 3 chrUextra 11653629 11654019 -17350637 - STALKER4_LTR LTR Gypsy -3 399 1 8 673 2484 9 11 14 chrUextra 11654019 11654367 -17350289 - STALKER4_I LTR Gypsy 0 6530 6184 8 673 27 29 0 0 chrUextra 11654501 11654535 -17350121 + AT_rich Low_complexity Low_complexity 1 34 0 8 673 21 0 0 0 chrUextra 11655067 11655088 -17349568 + AT_rich Low_complexity Low_complexity 1 21 0 8 673 687 32 0 50 chrUextra 11655113 11655213 -17349443 + NINJA_LTR LTR Pao 1 95 -222 8 673 2347 10 0 0 chrUextra 11655313 11655611 -17349045 - Invader2_I LTR Gypsy -4294 298 1 8 673 2319 4 0 0 chrUextra 11655611 11655877 -17348779 - Invader2_LTR LTR Gypsy 0 266 1 8 673 3220 52 2 0 chrUextra 11656159 11656585 -17348071 + R2_DM LINE R2 374 800 -2807 8 673 421 108 0 0 chrUextra 11656581 11656646 -17348010 + R2_DM LINE R2 1199 1263 -2344 8 673 2110 41 0 0 chrUextra 11656638 11656905 -17347751 + R2_DM LINE R2 796 1062 -2545 8 673 1157 15 0 0 chrUextra 11657147 11657282 -17347374 - 5S_DM RNA RNA 0 135 1 8 673 1157 15 0 0 chrUextra 11657520 11657655 -17347001 - 5S_DM RNA RNA 0 135 1 8 673 204 40 0 0 chrUextra 11659089 11659114 -17345542 + (TTG)n Simple_repeat Simple_repeat 2 26 0 8 673 978 47 8 0 chrUextra 11659314 11659441 -17345215 + PROTOP_B DNA P 74 201 -952 8 673 6410 0 3 3 chrUextra 11659543 11660289 -17344367 + SSU-rRNA_Dme rRNA rRNA 904 1649 -346 8 673 1554 11 0 0 chrUextra 11660635 11660815 -17343841 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 673 6360 5 1 0 chrUextra 11661235 11661981 -17342675 + R1_DM LINE R1 4346 5092 -264 8 673 1316 189 3 13 chrUextra 11662081 11662392 -17342264 + SAR_DM Satellite Satellite 408 715 -757 8 673 1669 184 10 12 chrUextra 11662405 11662817 -17341839 + SAR_DM Satellite Satellite 666 1076 -396 8 673 21 0 0 0 chrUextra 11663090 11663111 -17341545 + AT_rich Low_complexity Low_complexity 1 21 0 8 673 594 158 9 144 chrUextra 11663415 11663630 -17341026 - Gypsy2_I LTR Gypsy -5457 678 493 8 673 2789 0 0 0 chrUextra 11663773 11664092 -17340564 + R2_DM LINE R2 3289 3607 0 8 673 3691 5 0 0 chrUextra 11664093 11664519 -17340137 + LSU-rRNA_Dme rRNA rRNA 2578 3003 -897 8 673 2899 183 35 20 chrUextra 11664625 11665365 -17339291 - SAR_DM Satellite Satellite -255 1217 467 8 674 3766 0 0 0 chrUextra 11665658 11666086 -17338570 - ROO_LTR LTR Pao 0 428 1 8 674 1027 16 0 0 chrUextra 11666086 11666211 -17338445 - ROO_I LTR Pao 0 8256 8132 8 674 1944 306 16 15 chrUextra 11666331 11667057 -17337599 + MICROPIA_I LTR Gypsy 2407 3133 -1343 8 674 695 104 9 0 chrUextra 11667157 11667263 -17337393 - BS2 LINE Jockey -4601 120 14 8 674 36 0 0 0 chrUextra 11667515 11667551 -17337105 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 192 40 0 0 chrUextra 11667669 11667694 -17336962 + (TAA)n Simple_repeat Simple_repeat 1 25 0 8 674 21 36 0 0 chrUextra 11667694 11667722 -17336934 + AT_rich Low_complexity Low_complexity 1 28 0 8 674 6200 1 0 34 chrUextra 11668003 11668749 -17335907 + LSU-rRNA_Dme rRNA rRNA 141 861 -3039 8 674 6113 43 0 1 chrUextra 11668849 11669593 -17335063 - R1_DM LINE R1 -3488 1868 1126 8 674 6692 4 0 1 chrUextra 11669695 11670441 -17334215 - DOC LINE Jockey -956 3769 3025 8 674 3504 18 2 0 chrUextra 11670541 11670942 -17333714 + PROTOP_A DNA P 704 1105 0 8 674 2021 61 70 0 chrUextra 11670942 11671287 -17333369 + PROTOP_B DNA P 420 754 -399 8 674 46 0 0 0 chrUextra 11671602 11671648 -17333008 + AT_rich Low_complexity Low_complexity 1 46 0 8 674 6388 7 4 3 chrUextra 11672233 11672979 -17331677 + Invader2_I LTR Gypsy 2260 3006 -1586 8 674 1668 20 0 5 chrUextra 11673079 11673284 -17331372 - NTS_DM Other Other -36 204 1 8 674 1824 21 17 17 chrUextra 11673284 11673524 -17331132 - NTS_DM Other Other 0 240 1 8 674 1835 17 17 17 chrUextra 11673524 11673764 -17330892 - NTS_DM Other Other 0 240 1 8 674 382 0 66 49 chrUextra 11673764 11673825 -17330831 - NTS_DM Other Other 0 240 179 8 674 511 33 0 0 chrUextra 11674008 11674069 -17330587 - DNAREP1_DM LINE Penelope -532 62 2 8 674 6510 4 3 1 chrUextra 11674771 11675517 -17329139 + R1_DM LINE R1 659 1405 -3951 8 674 2609 0 0 3 chrUextra 11675617 11675904 -17328752 - ROO_LTR LTR Pao -142 286 1 8 674 228 35 0 0 chrUextra 11675906 11675935 -17328721 + (GAGAA)n Simple_repeat Simple_repeat 4 32 0 8 674 1269 63 0 7 chrUextra 11675935 11676363 -17328293 + (ATAAG)n Simple_repeat Simple_repeat 1 425 0 8 674 249 128 0 0 chrUextra 11676465 11676504 -17328152 + ARS406_DM Unknown Unknown 91 129 -224 8 674 500 146 0 0 chrUextra 11676497 11676586 -17328070 - SAR_DM Satellite Satellite -841 631 543 8 674 2772 181 10 16 chrUextra 11676597 11677209 -17327447 - SAR_DM Satellite Satellite -396 1076 469 8 674 3201 40 46 23 chrUextra 11677385 11677823 -17326833 + PROTOP DNA P 1 448 -4032 8 674 1930 4 4 4 chrUextra 11677823 11678055 -17326601 - Copia_LTR LTR Copia 0 276 45 8 674 331 160 0 26 chrUextra 11678157 11678234 -17326422 + XDMR_DM Unknown Unknown 277 351 -9 8 674 3389 173 9 19 chrUextra 11678166 11678901 -17325755 - SAR_DM Satellite Satellite -361 1111 384 8 674 516 32 0 0 chrUextra 11679001 11679063 -17325593 - QUASIMODO_I LTR Gypsy -5998 62 1 8 674 4741 6 0 4 chrUextra 11679064 11679600 -17325056 - QUASIMODO_LTR LTR Gypsy -2 656 123 8 674 228 0 119 0 chrUextra 11679602 11679644 -17325012 + (TATAG)n Simple_repeat Simple_repeat 4 50 0 8 674 255 105 0 0 chrUextra 11679651 11679689 -17324967 - BARI1 DNA Tc1 -1710 40 3 8 674 737 11 0 0 chrUextra 11679657 11679747 -17324909 + IDEFIX_LTR LTR Gypsy 1 90 -504 8 674 766 0 0 0 chrUextra 11679847 11679933 -17324723 - NTS_DM Other Other -117 123 38 8 674 888 18 0 27 chrUextra 11679933 11680045 -17324611 - NTS_DM Other Other -107 133 25 8 674 22 56 0 0 chrUextra 11680071 11680107 -17324549 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 269 125 0 0 chrUextra 11680120 11680160 -17324496 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 262 150 0 0 chrUextra 11680203 11680243 -17324413 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 262 150 0 0 chrUextra 11680295 11680335 -17324321 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 262 150 0 0 chrUextra 11680387 11680427 -17324229 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 22 56 0 0 chrUextra 11680432 11680468 -17324188 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 487 0 0 0 chrUextra 11680540 11680593 -17324063 - LSU-rRNA_Dme rRNA rRNA 0 3900 3848 8 674 2752 0 0 0 chrUextra 11680708 11681016 -17323640 + LSU-rRNA_Dme rRNA rRNA 218 525 -3375 8 674 3843 5 0 0 chrUextra 11681012 11681439 -17323217 + LSU-rRNA_Dme rRNA rRNA 676 1102 -2798 8 674 4007 54 2 0 chrUextra 11681539 11682079 -17322577 - QUASIMODO_I LTR Gypsy -2352 3708 3168 8 674 1685 38 0 0 chrUextra 11682073 11682285 -17322371 - QUASIMODO_I LTR Gypsy -3158 2902 2691 8 674 369 183 66 80 chrUextra 11682389 11682526 -17322130 + Gypsy_LTR LTR Gypsy 328 462 -20 8 674 244 220 0 0 chrUextra 11682646 11682705 -17321951 + TIRANT_I LTR Gypsy 6974 7032 -660 8 674 1335 134 12 44 chrUextra 11682860 11683131 -17321525 + QUASIMODO_LTR LTR Gypsy 91 488 -170 8 674 3029 176 17 14 chrUextra 11683231 11683977 -17320679 + SAR_DM Satellite Satellite 195 1205 -267 8 674 1529 37 0 0 chrUextra 11684077 11684268 -17320388 + TART_B1 LINE telomeric 3462 3652 -7002 8 674 3731 102 34 20 chrUextra 11684265 11684823 -17319833 + TART_B1 LINE telomeric 4297 4862 -5792 8 674 2932 40 0 3 chrUextra 11684923 11685277 -17319379 + STALKER4_LTR LTR Gypsy 47 399 -3 8 674 3114 19 0 0 chrUextra 11685310 11685669 -17318987 - R1_DM LINE R1 -957 4399 4041 8 674 3083 180 13 18 chrUextra 11685770 11686515 -17318141 - SAR_DM Satellite Satellite -625 741 1 8 674 1318 75 11 0 chrUextra 11686615 11686803 -17317853 - DM297_I LTR Gypsy -3271 2896 2707 8 674 3443 97 6 19 chrUextra 11686832 11687358 -17317298 - DM297_I LTR Gypsy -3400 2767 2249 8 674 5209 83 21 13 chrUextra 11688307 11689053 -17315603 + TART_B1 LINE telomeric 2397 3148 -7506 8 674 3294 179 7 10 chrUextra 11689153 11689862 -17314794 - SAR_DM Satellite Satellite -571 901 195 8 674 728 108 31 0 chrUextra 11689770 11689899 -17314757 + ARS406_DM Unknown Unknown 1 133 -220 8 674 6543 4 3 0 chrUextra 11690845 11691591 -17313065 + DM176_I LTR Gypsy 3064 3811 -2609 8 674 2996 181 17 18 chrUextra 11691691 11692437 -17312219 - SAR_DM Satellite Satellite -620 744 1 8 674 21 89 0 0 chrUextra 11693194 11693250 -17311406 + AT_rich Low_complexity Low_complexity 1 56 0 8 674 1643 25 5 0 chrUextra 11693382 11693586 -17311070 - NTS_DM Other Other -35 205 1 8 674 1835 17 17 17 chrUextra 11693586 11693826 -17310830 - NTS_DM Other Other 0 240 1 8 674 1813 21 17 17 chrUextra 11693826 11694066 -17310590 - NTS_DM Other Other 0 240 1 8 674 382 0 66 49 chrUextra 11694066 11694127 -17310529 - NTS_DM Other Other 0 240 179 8 674 386 283 0 0 chrUextra 11694866 11694972 -17309684 + Copia2_I LTR Copia 567 672 -3490 8 674 2996 198 17 24 chrUextra 11695072 11695815 -17308841 + SAR_DM Satellite Satellite 1 737 -203 8 674 21 89 0 0 chrUextra 11696110 11696166 -17308490 + AT_rich Low_complexity Low_complexity 1 56 0 8 674 21 57 0 0 chrUextra 11696204 11696239 -17308417 + AT_rich Low_complexity Low_complexity 1 35 0 8 674 1877 211 20 101 chrUextra 11696762 11697507 -17307149 + HETA LINE telomeric 3390 4074 -2007 8 674 6613 1 1 0 chrUextra 11697607 11698352 -17306304 + DM176_I LTR Gypsy 2580 3325 -3095 8 674 514 119 36 0 chrUextra 11698503 11698587 -17306069 - NTS_DM Other Other -150 90 4 8 674 1355 6 0 18 chrUextra 11698698 11698863 -17305793 - NTS_DM Other Other -78 162 1 8 674 1926 4 17 13 chrUextra 11698863 11699102 -17305554 - NTS_DM Other Other 0 240 1 8 674 665 0 42 32 chrUextra 11699102 11699197 -17305459 - NTS_DM Other Other 0 240 145 8 674 6669 3 1 3 chrUextra 11699297 11700042 -17304614 - LSU-rRNA_Dme rRNA rRNA -2399 1501 758 8 674 6379 24 24 0 chrUextra 11700142 11700887 -17303769 - R1_DM LINE R1 -2748 2608 1846 8 674 2328 192 39 4 chrUextra 11700987 11701731 -17302925 - SAR_DM Satellite Satellite -707 769 1 8 674 5085 55 7 15 chrUextra 11701832 11702577 -17302079 - I_DM LINE I -4578 1653 915 8 674 6623 11 0 0 chrUextra 11702677 11703422 -17301234 - R1_DM LINE R1 -145 5211 4467 8 674 1182 13 20 13 chrUextra 11703522 11703673 -17300983 - DM297_LTR LTR Gypsy -262 152 1 8 674 2780 215 20 13 chrUextra 11704367 11705112 -17299544 - SAR_DM Satellite Satellite -277 1195 446 8 674 6544 3 1 0 chrUextra 11705212 11705957 -17298699 + DOC LINE Jockey 583 1328 -3397 8 674 3426 181 8 8 chrUextra 11706057 11706788 -17297868 - SAR_DM Satellite Satellite -470 1002 272 8 674 1792 189 59 27 chrUextra 11706902 11707515 -17297141 - SAR_DM Satellite Satellite -865 632 1 8 674 853 79 0 0 chrUextra 11707520 11707647 -17297009 + ARS406_DM Unknown Unknown 4 130 -223 8 674 1497 169 21 27 chrUextra 11707758 11708489 -17296167 + SAR_DM Satellite Satellite 1 726 -1044 8 674 6161 8 0 23 chrUextra 11708592 11709337 -17295319 - STALKER4_I LTR Gypsy -4588 1942 1215 8 674 5805 32 1 0 chrUextra 11709437 11710134 -17294522 - FW_DM LINE Jockey -3937 755 58 8 674 252 57 0 28 chrUextra 11710137 11710173 -17294483 + BATUMI_I LTR Pao 6717 6751 -1212 8 674 1362 297 26 19 chrUextra 11710497 11711025 -17293631 + Gypsy5_I LTR Gypsy 2189 2720 -3789 8 674 6442 19 1 0 chrUextra 11711127 11711872 -17292784 + FW_DM LINE Jockey 2390 3135 -1557 8 674 864 26 17 0 chrUextra 11711972 11712089 -17292567 - DOC5_DM LINE Jockey -585 4097 3979 8 674 613 134 43 17 chrUextra 11712108 11712308 -17292348 - DMCR1A LINE CR1 -4010 460 365 8 674 246 191 0 0 chrUextra 11712375 11712422 -17292234 + DMCR1A LINE CR1 744 790 -3680 8 674 270 208 0 0 chrUextra 11712554 11712607 -17292049 + NOMAD_I LTR Gypsy 6520 6572 0 8 674 6570 1 0 0 chrUextra 11712817 11713562 -17291094 - STALKER4_I LTR Gypsy -2609 3921 3177 8 674 6422 11 0 0 chrUextra 11713662 11714407 -17290249 - STALKER4_I LTR Gypsy -4606 1924 1180 8 674 3116 189 15 21 chrUextra 11714507 11715252 -17289404 - SAR_DM Satellite Satellite -300 1172 433 8 674 5796 16 20 20 chrUextra 11715352 11716097 -17288559 - ROO_I LTR Pao -7393 863 119 8 674 6681 5 1 0 chrUextra 11716197 11716942 -17287714 - R1_DM LINE R1 -44 5312 4567 8 674 5700 36 97 0 chrUextra 11717042 11717787 -17286869 + IDEFIX_I LTR Gypsy 633 1449 -4179 8 674 5820 21 0 40 chrUextra 11717887 11718632 -17286024 - MDG3_I LTR Gypsy -3082 1904 1190 8 674 3796 2 2 0 chrUextra 11718732 11719151 -17285505 + LSU-rRNA_Dme rRNA rRNA 3481 3900 0 8 674 22 56 0 0 chrUextra 11719223 11719259 -17285397 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 262 150 0 0 chrUextra 11719264 11719304 -17285352 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 262 150 0 0 chrUextra 11719356 11719396 -17285260 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 251 132 0 0 chrUextra 11719439 11719477 -17285179 + LSU-rRNA_Dme rRNA rRNA 2581 2618 -1282 8 674 6030 34 50 4 chrUextra 11720422 11721167 -17283489 + Baggins1 LINE LOA 894 1672 -3781 8 674 6590 7 0 0 chrUextra 11721267 11722012 -17282644 + DMRT1B LINE R1 681 1425 -3758 8 674 2821 5 196 9 chrUextra 11722112 11722530 -17282126 + BLOOD_I LTR Gypsy 6118 6613 0 8 674 1862 43 8 45 chrUextra 11722530 11722796 -17281860 + BLOOD_LTR LTR Gypsy 1 256 -143 8 674 618 282 68 8 chrUextra 11722965 11723201 -17281455 + Invader1_I LTR Gypsy 1846 2095 -1091 8 674 556 230 7 7 chrUextra 11723201 11723350 -17281306 + Invader1_I LTR Gypsy 2416 2564 -622 8 674 4013 0 0 0 chrUextra 11723802 11724256 -17280400 - HOBO DNA hAT -2562 454 1 8 674 6234 20 0 0 chrUextra 11724647 11725392 -17279264 + Gypsy4_I LTR Gypsy 3756 4500 -1788 8 674 2784 23 0 6 chrUextra 11725887 11726237 -17278419 - CIRCE LINE Composite -1376 4980 4633 8 674 6342 3 3 3 chrUextra 11726337 11727082 -17277574 + LSU-rRNA_Dme rRNA rRNA 908 1652 -2248 8 674 27 29 0 0 chrUextra 11727272 11727306 -17277350 + AT_rich Low_complexity Low_complexity 1 34 0 8 674 620 93 41 0 chrUextra 11727545 11727642 -17277014 + Baggins1 LINE LOA 4727 4827 -626 8 674 765 97 227 0 chrUextra 11727635 11727789 -17276867 - FB4_DM DNA Tc1 -3898 191 3 8 674 4871 109 28 0 chrUextra 11728027 11728771 -17275885 - Gypsy12_I LTR Gypsy -1522 4024 3260 8 674 2599 7 0 0 chrUextra 11728872 11729174 -17275482 + MAX_LTR LTR Pao 20 321 0 8 674 841 287 64 17 chrUextra 11729174 11729599 -17275057 - MICROPIA_I LTR Gypsy -1702 2774 2350 8 674 6374 0 30 0 chrUextra 11729717 11730462 -17274194 + STALKER4_I LTR Gypsy 3713 4479 -2051 8 674 5761 20 1 15 chrUextra 11730562 11731307 -17273349 + ROO_I LTR Pao 2846 3580 -4676 8 674 3782 2 0 0 chrUextra 11731407 11731838 -17272818 - SSU-rRNA_Dme rRNA rRNA -1564 431 1 8 674 32 0 0 0 chrUextra 11731970 11732002 -17272654 + AT_rich Low_complexity Low_complexity 1 32 0 8 674 6128 3 1 1 chrUextra 11732255 11732997 -17271659 - ROO_I LTR Pao -4752 3504 2763 8 674 6380 9 4 0 chrUextra 11733097 11733842 -17270814 - BS LINE Jockey -1518 3608 2861 8 674 239 122 41 0 chrUextra 11733942 11733991 -17270665 + ARS406_DM Unknown Unknown 139 189 -164 8 674 2881 181 8 9 chrUextra 11733949 11734687 -17269969 - SAR_DM Satellite Satellite -262 1210 195 8 674 3022 189 16 25 chrUextra 11734789 11735527 -17269129 - SAR_DM Satellite Satellite -587 731 1 8 674 1554 25 75 0 chrUextra 11736178 11736377 -17268279 + PROTOP_B DNA P 1 214 -939 8 674 2974 184 52 18 chrUextra 11736477 11737222 -17267434 + SAR_DM Satellite Satellite 1 770 -208 8 674 37 39 0 0 chrUextra 11737497 11737548 -17267108 + AT_rich Low_complexity Low_complexity 1 51 0 8 674 22 35 0 0 chrUextra 11737649 11737678 -17266978 + AT_rich Low_complexity Low_complexity 1 29 0 8 674 21 57 0 0 chrUextra 11737875 11737910 -17266746 + AT_rich Low_complexity Low_complexity 1 35 0 8 674 1302 13 0 0 chrUextra 11737910 11738067 -17266589 + ALUII_DM Unknown Unknown 1 157 -83 8 674 257 287 58 84 chrUextra 11738195 11738385 -17266271 + Invader1_LTR LTR Gypsy 184 368 -55 8 674 4627 9 0 0 chrUextra 11739012 11739566 -17265090 + IDEFIX_I LTR Gypsy 2134 2687 -2941 8 674 1444 37 0 16 chrUextra 11739560 11739753 -17264903 + IDEFIX_I LTR Gypsy 2814 3003 -2625 8 674 1170 130 0 5 chrUextra 11739857 11740058 -17264598 + ROVER-I_DM LTR Gypsy 5109 5308 -1276 8 674 2072 171 25 10 chrUextra 11740093 11740602 -17264054 + ROVER-I_DM LTR Gypsy 5990 6506 -78 8 674 1653 30 0 0 chrUextra 11740702 11740905 -17263751 - PROTOP_A DNA P -902 203 1 8 674 2040 101 68 3 chrUextra 11740905 11741272 -17263384 - S2_DM DNA Tc1 -1296 439 49 8 674 6476 3 0 0 chrUextra 11741547 11742292 -17262364 - LSU-rRNA_Dme rRNA rRNA -1047 2853 2109 8 674 326 0 0 0 chrUextra 11742392 11742430 -17262226 - R1_DM LINE R1 -2088 3268 3231 8 674 6162 1 0 1 chrUextra 11742429 11743137 -17261519 - LSU-rRNA_Dme rRNA rRNA -1246 2654 1948 8 674 6092 21 18 0 chrUextra 11743237 11743981 -17260675 + R1_DM LINE R1 4000 4756 -600 8 674 3500 0 0 2 chrUextra 11744085 11744487 -17260169 + LSU-rRNA_Dme rRNA rRNA 3500 3900 0 8 674 22 56 0 0 chrUextra 11744559 11744595 -17260061 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 246 150 0 0 chrUextra 11744600 11744640 -17260016 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 246 150 0 0 chrUextra 11744692 11744732 -17259924 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 1255 67 0 0 chrUextra 11744934 11745099 -17259557 + CIRCE LINE Composite 2735 2899 -3457 8 674 2263 87 43 79 chrUextra 11745099 11745506 -17259150 - Gypsy6A_LTR LTR Gypsy 0 420 1 8 674 1339 30 0 0 chrUextra 11745506 11745672 -17258984 - Gypsy3_I LTR Gypsy 0 6177 6012 8 674 4660 65 24 17 chrUextra 11745772 11746517 -17258139 + TART LINE telomeric 1 651 -13826 8 674 659 180 13 51 chrUextra 11746778 11746936 -17257720 + HETRP_DM Satellite Satellite 1518 1669 -203 8 674 699 179 6 38 chrUextra 11747080 11747237 -17257419 + HETRP_DM Satellite Satellite 1518 1669 -203 8 674 6097 7 4 0 chrUextra 11747462 11748207 -17256449 + DM297_I LTR Gypsy 1581 2328 -3839 8 674 1083 285 32 59 chrUextra 11749249 11749896 -17254760 - Invader4_I LTR Gypsy -3052 1047 422 8 674 2683 192 25 8 chrUextra 11750001 11750742 -17253914 - SAR_DM Satellite Satellite -396 753 1 8 674 3540 40 130 1 chrUextra 11750842 11751587 -17253069 - R1_DM LINE R1 -3779 1577 737 8 674 382 209 26 43 chrUextra 11752317 11752432 -17252224 + Gypsy_LTR LTR Gypsy 1 113 -369 8 674 6451 4 0 0 chrUextra 11753377 11754122 -17250534 + FW_DM LINE Jockey 3572 4316 -376 8 674 6124 14 0 4 chrUextra 11755067 11755812 -17248844 - MICROPIA_I LTR Gypsy -56 4420 3679 8 674 349 269 0 0 chrUextra 11756117 11756225 -17248431 + Gypsy7_I LTR Gypsy 1560 1667 -3317 8 674 3058 45 2 17 chrUextra 11756253 11756657 -17247999 - G5A_DM LINE Jockey -3 2838 2441 8 674 767 0 0 0 chrUextra 11756757 11756852 -17247804 + ROO_I LTR Pao 7911 8005 -251 8 674 2649 13 9 0 chrUextra 11757602 11757918 -17246738 + Invader1_LTR LTR Gypsy 105 423 0 8 674 487 240 0 16 chrUextra 11757935 11758058 -17246598 - HETRP_DM Satellite Satellite -203 1669 1549 8 674 426 20 0 0 chrUextra 11758058 11758109 -17246547 + (TC)n Simple_repeat Simple_repeat 2 52 0 8 674 430 208 9 19 chrUextra 11758239 11758347 -17246309 - HETRP_DM Satellite Satellite -203 1669 1563 8 674 23 0 0 0 chrUextra 11758472 11758495 -17246161 + AT_rich Low_complexity Low_complexity 1 23 0 8 674 593 79 11 0 chrUextra 11758495 11758584 -17246072 - BS3_DM LINE Jockey -1 1789 1700 8 674 300 132 12 24 chrUextra 11759051 11759136 -17245520 + A-rich Low_complexity Low_complexity 1 84 0 8 674 2487 180 12 19 chrUextra 11759292 11759906 -17244750 - SAR_DM Satellite Satellite -372 739 38 8 674 742 60 0 0 chrUextra 11759906 11760006 -17244650 + ARS406_DM Unknown Unknown 90 189 -164 8 674 2487 180 12 19 chrUextra 11760006 11760037 -17244619 - SAR_DM Satellite Satellite -372 37 1 8 674 1038 190 0 0 chrUextra 11760137 11760337 -17244319 + Gypsy3_I LTR Gypsy 5957 6156 -21 8 674 842 198 119 89 chrUextra 11760340 11760711 -17243945 + Gypsy3_LTR LTR Gypsy 1 382 -16 8 674 5541 24 46 1 chrUextra 11760982 11761727 -17242929 - R1_DM LINE R1 -2637 2719 1942 8 674 6298 7 0 3 chrUextra 11761828 11762572 -17242084 + FW_DM LINE Jockey 3758 4499 -193 8 674 6391 0 0 4 chrUextra 11762672 11763417 -17241239 + G2_DM LINE Jockey 802 1543 -1559 8 674 6189 8 0 5 chrUextra 11763517 11764262 -17240394 + FW_DM LINE Jockey 1224 1964 -2728 8 674 5987 24 7 4 chrUextra 11764362 11765107 -17239549 + CIRCE LINE Composite 3040 3786 -2570 8 674 6193 5 3 4 chrUextra 11765207 11765952 -17238704 - R1_DM LINE R1 -1413 3943 3200 8 674 6032 12 0 0 chrUextra 11766054 11766797 -17237859 + QUASIMODO_I LTR Gypsy 1016 1758 -4302 8 674 6136 8 0 0 chrUextra 11766897 11767642 -17237014 + QUASIMODO_I LTR Gypsy 1097 1841 -4219 8 674 1847 62 292 2 chrUextra 11767743 11768195 -17236461 + PROTOP_B DNA P 229 856 -297 8 674 1980 92 0 3 chrUextra 11768203 11768487 -17236169 - Jockey2 LINE Jockey -1608 1820 1538 8 674 1236 73 17 6 chrUextra 11768587 11768765 -17235891 + Gypsy10_LTR LTR Gypsy 185 364 0 8 674 3049 86 34 53 chrUextra 11768765 11769332 -17235324 + Gypsy10_I LTR Gypsy 1 556 -4722 8 674 425 326 5 5 chrUextra 11769972 11770166 -17234490 + GTWIN_I LTR Gypsy 725 918 -5503 8 674 1914 177 18 7 chrUextra 11770279 11770723 -17233933 - SAR_DM Satellite Satellite -731 741 293 8 674 1146 195 21 3 chrUextra 11770739 11770819 -17233837 - SAR_DM Satellite Satellite -748 724 497 8 674 1201 76 27 0 chrUextra 11770819 11771003 -17233653 + ARS406_DM Unknown Unknown 1 189 -164 8 674 1146 195 21 3 chrUextra 11771003 11771022 -17233634 - SAR_DM Satellite Satellite -748 496 437 8 674 6119 4 28 0 chrUextra 11771122 11771867 -17232789 + STALKER4_I LTR Gypsy 4792 5557 -973 8 674 6241 3 0 3 chrUextra 11771967 11772712 -17231944 + LSU-rRNA_Dme rRNA rRNA 341 1083 -2817 8 674 4724 4 0 0 chrUextra 11772812 11773371 -17231285 + DOC LINE Jockey 4163 4721 -4 8 674 730 231 0 0 chrUextra 11773371 11773553 -17231103 + ROVER-I_DM LTR Gypsy 2592 2773 -3811 8 674 5446 35 3 3 chrUextra 11773717 11774402 -17230254 - R1_DM LINE R1 0 5356 4672 8 674 5745 18 4 7 chrUextra 11774502 11775231 -17229425 - STALKER4_I LTR Gypsy -4747 1783 1057 8 674 2405 102 24 39 chrUextra 11775347 11776092 -17228564 + DMSAT6 Satellite Satellite 1 734 -97 9 674 2812 181 16 18 chrUextra 11776192 11776937 -17227719 + SAR_DM Satellite Satellite 1 743 -291 9 674 6659 16 1 1 chrUextra 11777037 11777782 -17226874 - R2_DM LINE R2 -446 3161 2417 9 674 6399 36 3 0 chrUextra 11777882 11778627 -17226029 + R1_DM LINE R1 4176 4922 -434 9 674 3627 22 0 5 chrUextra 11778727 11779138 -17225518 + R1_DM LINE R1 4948 5356 0 9 674 2283 80 6 6 chrUextra 11779159 11779472 -17225184 + R1_DM LINE R1 23 335 -5021 9 674 782 94 0 0 chrUextra 11779572 11779689 -17224967 - ARS406_DM Unknown Unknown -206 147 31 9 674 2043 186 63 20 chrUextra 11779675 11780317 -17224339 + SAR_DM Satellite Satellite 1 669 -774 9 674 6951 3 0 0 chrUextra 11780418 11781162 -17223494 + NOMAD_I LTR Gypsy 2794 3537 -3035 9 674 540 188 0 0 chrUextra 11781262 11781400 -17223256 + (AATAG)n Simple_repeat Simple_repeat 2 139 0 9 674 2479 127 24 31 chrUextra 11782110 11782851 -17221805 + DMSAT6 Satellite Satellite 1 735 -74 9 674 3329 168 22 27 chrUextra 11782952 11783694 -17220962 + SAR_DM Satellite Satellite 444 1181 -291 9 674 3244 123 79 43 chrUextra 11783797 11784542 -17220114 + STALKER4_I LTR Gypsy 410 1232 -5298 9 674 5741 3 2 2 chrUextra 11784642 11785264 -17219392 + LSU-rRNA_Dme rRNA rRNA 3279 3900 0 9 674 29 28 0 0 chrUextra 11785336 11785372 -17219284 + AT_rich Low_complexity Low_complexity 1 36 0 9 674 340 318 44 44 chrUextra 11785487 11785780 -17218876 - GTWIN_I LTR Gypsy -3809 2612 2320 9 674 385 355 21 54 chrUextra 11786682 11787077 -17217579 - Gypsy6_I LTR Gypsy -5228 1784 1351 9 674 228 86 0 0 chrUextra 11787197 11787232 -17217424 + (TTA)n Simple_repeat Simple_repeat 2 36 0 9 674 5367 22 14 17 chrUextra 11787232 11787857 -17216799 - ACCORD2_I LTR Gypsy -6069 1143 520 9 674 467 16 0 15 chrUextra 11787856 11787921 -17216735 - ACCORD2_I LTR Gypsy -6814 398 335 9 674 6824 5 3 0 chrUextra 11788021 11788765 -17215891 - DIVER_I LTR Pao -2482 3161 2416 9 674 6623 12 1 0 chrUextra 11788865 11789609 -17215047 + DMRT1B LINE R1 1025 1769 -3414 9 674 1042 25 0 8 chrUextra 11789709 11789830 -17214826 + LSU-rRNA_Dme rRNA rRNA 2536 2655 -1245 9 674 5057 7 0 0 chrUextra 11789830 11790382 -17214274 + R1_DM LINE R1 4805 5356 0 9 674 662 14 0 0 chrUextra 11790380 11790453 -17214203 + LSU-rRNA_Dme rRNA rRNA 2640 2712 -1188 9 674 6889 5 0 0 chrUextra 11790553 11791297 -17213359 + R2_DM LINE R2 2125 2868 -739 9 674 2763 213 24 13 chrUextra 11791397 11792141 -17212515 - SAR_DM Satellite Satellite -599 752 1 9 674 656 155 0 10 chrUextra 11792241 11792345 -17212311 - HETA LINE telomeric -1431 4650 4548 9 674 1357 148 129 27 chrUextra 11792335 11792678 -17211978 + TART LINE telomeric 9260 9604 -4873 9 674 988 191 36 88 chrUextra 11792678 11792983 -17211673 + HETA LINE telomeric 5334 5622 -459 9 674 1605 11 0 0 chrUextra 11793085 11793273 -17211383 + ROO_I LTR Pao 3886 4073 -4183 9 674 5124 2 0 0 chrUextra 11793264 11793829 -17210827 + ROO_I LTR Pao 4206 4770 -3486 9 674 6738 7 1 0 chrUextra 11793929 11794673 -17209983 + MDG1_I LTR Gypsy 3454 4198 -2398 9 674 6644 11 1 3 chrUextra 11794773 11795517 -17209139 - R1_DM LINE R1 -942 4414 3672 9 674 5540 37 11 18 chrUextra 11795617 11796361 -17208295 + IDEFIX_I LTR Gypsy 4742 5480 -148 9 84 2014 5 0 0 chrUextra 11796461 11796680 -17207976 - FW_DM LINE Jockey -4473 219 1 9 675 2460 166 31 14 chrUextra 11796687 11797205 -17207451 + SAR_DM Satellite Satellite 273 799 -673 9 675 532 119 36 0 chrUextra 11797516 11797600 -17207056 - NTS_DM Other Other -150 90 4 9 675 1388 6 0 18 chrUextra 11797710 11797875 -17206781 - NTS_DM Other Other -78 162 1 9 675 1303 12 23 17 chrUextra 11797875 11798049 -17206607 - NTS_DM Other Other 0 240 66 9 675 6703 5 0 0 chrUextra 11798149 11798893 -17205763 + DMRT1A LINE R1 694 1437 -3746 9 675 279 147 51 139 chrUextra 11798993 11799072 -17205584 + Copia_I LTR Copia 4442 4513 -80 9 675 1252 170 110 25 chrUextra 11799418 11799737 -17204919 - TAHRE LINE telomeric -973 9490 9145 9 675 1439 226 44 2 chrUextra 11799846 11800262 -17204394 - Gypsy10_I LTR Gypsy -2599 2679 1895 9 675 2710 19 3 9 chrUextra 11800259 11800577 -17204079 + CIRCE LINE Composite 3515 3830 -2526 9 675 6661 4 4 4 chrUextra 11800682 11801425 -17203231 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1049 9 675 1367 54 6 0 chrUextra 11801525 11801692 -17202964 - DOC3_DM LINE Jockey -2053 2687 2520 9 675 4571 28 9 6 chrUextra 11801678 11802215 -17202441 - DOC3_DM LINE Jockey -2439 2301 1763 9 675 592 14 0 0 chrUextra 11802200 11802269 -17202387 - DMRT1B LINE R1 0 5183 5115 9 675 6933 1 1 0 chrUextra 11802369 11803113 -17201543 - DIVER_I LTR Pao -4031 1612 868 9 675 6443 28 3 0 chrUextra 11803213 11803957 -17200699 - R1_DM LINE R1 -224 5132 4387 9 675 6924 0 0 0 chrUextra 11804901 11805645 -17199011 - DM1731_I LTR Copia -999 2977 2234 9 675 6883 0 0 0 chrUextra 11805745 11806489 -17198167 + BS2 LINE Jockey 2634 3377 -1344 9 675 762 251 62 0 chrUextra 11806589 11806800 -17197856 - QUASIMODO_I LTR Gypsy -4022 2038 1815 9 675 269 305 83 41 chrUextra 11806939 11807301 -17197355 - QUASIMODO_I LTR Gypsy -4569 1491 1115 9 675 3762 96 42 4 chrUextra 11808277 11809021 -17195635 - TART LINE telomeric -13015 1462 655 9 675 3163 117 65 89 chrUextra 11809121 11809865 -17194791 + PROTOP_B DNA P 266 991 -162 9 675 6605 8 0 0 chrUextra 11809965 11810709 -17193947 + MDG1_I LTR Gypsy 2734 3477 -3119 9 675 6555 15 1 0 chrUextra 11810809 11811553 -17193103 - STALKER4_I LTR Gypsy -4263 2267 1523 9 675 6577 21 0 0 chrUextra 11811653 11812397 -17192259 - R1_DM LINE R1 -783 4573 3830 9 675 5623 10 0 0 chrUextra 11812624 11813241 -17191415 + Gypsy4_I LTR Gypsy 374 990 -5298 9 675 754 12 0 0 chrUextra 11813341 11813423 -17191233 - NTS_DM Other Other -158 82 1 9 675 1858 21 17 17 chrUextra 11813423 11813663 -17190993 - NTS_DM Other Other 0 240 1 9 675 1880 17 17 17 chrUextra 11813663 11813903 -17190753 - NTS_DM Other Other 0 240 1 9 675 1252 28 22 22 chrUextra 11813903 11814085 -17190571 - NTS_DM Other Other 0 240 59 9 675 2149 21 0 0 chrUextra 11814185 11814425 -17190231 - FW_DM LINE Jockey -2264 2428 2189 9 675 790 74 83 0 chrUextra 11814411 11814519 -17190137 + TART LINE telomeric 3913 4029 -10448 9 675 1772 157 58 55 chrUextra 11814490 11814929 -17189727 + TART LINE telomeric 4698 5043 -9434 9 675 1407 29 0 6 chrUextra 11815029 11815204 -17189452 - NTS_DM Other Other -66 174 1 9 675 1540 15 20 20 chrUextra 11815204 11815407 -17189249 - NTS_DM Other Other 0 240 38 9 675 928 9 0 27 chrUextra 11815407 11815519 -17189137 - NTS_DM Other Other -107 133 25 9 675 1309 24 0 6 chrUextra 11815571 11815736 -17188920 - NTS_DM Other Other -39 201 38 9 675 268 0 0 0 chrUextra 11815736 11815773 -17188883 - NTS_DM Other Other -107 133 97 9 675 6517 20 9 0 chrUextra 11815873 11816617 -17188039 - FW_DM LINE Jockey -1612 3080 2330 9 675 6700 11 0 5 chrUextra 11816717 11817461 -17187195 + CIRCE LINE Composite 3604 4343 -2013 9 675 266 196 0 19 chrUextra 11817679 11817731 -17186925 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 266 196 0 19 chrUextra 11817771 11817823 -17186833 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 266 196 0 19 chrUextra 11817863 11817915 -17186741 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 277 176 0 19 chrUextra 11817946 11817998 -17186658 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 22 56 0 0 chrUextra 11818011 11818047 -17186609 + AT_rich Low_complexity Low_complexity 1 36 0 9 675 928 9 0 27 chrUextra 11818073 11818185 -17186471 + NTS_DM Other Other 25 133 -107 9 675 949 17 0 8 chrUextra 11818185 11818303 -17186353 + NTS_DM Other Other 38 154 -86 9 675 258 30 30 0 chrUextra 11818405 11818438 -17186218 - NTS_DM Other Other -206 34 1 9 675 1507 20 20 20 chrUextra 11818438 11818641 -17186015 - NTS_DM Other Other 0 240 38 9 675 870 0 0 0 chrUextra 11818641 11818737 -17185919 - NTS_DM Other Other -107 133 38 9 675 890 9 9 27 chrUextra 11818737 11818848 -17185808 - NTS_DM Other Other -107 133 25 9 675 21 57 0 0 chrUextra 11818874 11818909 -17185747 + AT_rich Low_complexity Low_complexity 1 35 0 9 675 1332 18 0 6 chrUextra 11818909 11819074 -17185582 - NTS_DM Other Other -39 201 38 9 675 613 13 0 0 chrUextra 11819074 11819149 -17185507 - NTS_DM Other Other -107 133 59 9 675 6575 30 0 0 chrUextra 11819249 11819993 -17184663 + MAX_I LTR Pao 5418 6161 -1753 9 675 430 324 34 38 chrUextra 11821030 11821426 -17183230 + Gypsy3_I LTR Gypsy 1179 1784 -5228 9 675 5103 38 3 8 chrUextra 11822625 11823242 -17181414 + DMRT1B LINE R1 4570 5183 0 9 675 1078 34 20 7 chrUextra 11823222 11823369 -17181287 + DOC3_DM LINE Jockey 1751 1899 -2841 9 675 3117 74 17 16 chrUextra 11823469 11823984 -17180672 - HETA LINE telomeric -5444 637 1 9 675 2010 4 4 0 chrUextra 11823981 11824213 -17180443 - TAHRE LINE telomeric -11 10452 10220 9 675 6934 1 1 0 chrUextra 11824313 11825057 -17179599 + R2_DM LINE R2 2794 3538 -69 9 675 2838 156 75 24 chrUextra 11825293 11825877 -17178779 + Stalker2_I LTR Gypsy 242 855 -6547 9 675 2468 276 9 3 chrUextra 11826001 11826742 -17177914 + ROVER-I_DM LTR Gypsy 3413 4158 -2426 9 675 2990 123 6 8 chrUextra 11826845 11827589 -17177067 - BATUMI_I LTR Pao -3151 4763 3975 9 675 6373 12 51 0 chrUextra 11827689 11828433 -17176223 + STALKER4_I LTR Gypsy 1951 2732 -3798 9 675 2925 213 26 15 chrUextra 11828533 11829275 -17175381 + SAR_DM Satellite Satellite 1 750 -203 9 675 6185 30 1 11 chrUextra 11829377 11830121 -17174535 + BATUMI_I LTR Pao 2780 3516 -4447 9 675 6806 3 0 0 chrUextra 11830221 11830965 -17173691 - FW_DM LINE Jockey -2926 1766 1023 9 675 6831 4 0 0 chrUextra 11831065 11831809 -17172847 - R1_DM LINE R1 -2333 3023 2280 9 675 6329 44 0 0 chrUextra 11831909 11832653 -17172003 - BATUMI_I LTR Pao -2818 5145 4402 9 675 195 42 0 0 chrUextra 11833391 11833415 -17171241 + (TC)n Simple_repeat Simple_repeat 1 24 0 9 675 2735 3 3 0 chrUextra 11833597 11833894 -17170762 - SSU-rRNA_Dme rRNA rRNA -1697 298 1 9 675 32 0 0 0 chrUextra 11834026 11834058 -17170598 + AT_rich Low_complexity Low_complexity 1 32 0 9 675 6423 25 0 0 chrUextra 11834441 11835185 -17169471 - MDG1_I LTR Gypsy -3099 3497 2754 9 675 6689 8 0 3 chrUextra 11835285 11836029 -17168627 + R1_DM LINE R1 4144 4885 -471 9 675 1901 5 18 13 chrUextra 11836129 11836358 -17168298 - NTS_DM Other Other -10 230 1 9 675 1878 21 17 17 chrUextra 11836358 11836598 -17168058 - NTS_DM Other Other 0 240 1 9 675 1862 17 21 17 chrUextra 11836598 11836837 -17167819 - NTS_DM Other Other 0 240 1 9 675 1005 435 4 16 chrUextra 11836837 11837080 -17167576 - NTS_DM Other Other 0 240 1 9 675 1536 30 10 15 chrUextra 11837080 11837284 -17167372 - NTS_DM Other Other 0 240 38 9 675 936 9 0 27 chrUextra 11837284 11837396 -17167260 - NTS_DM Other Other -107 133 25 9 675 1270 24 0 18 chrUextra 11837448 11837615 -17167041 - NTS_DM Other Other -39 201 38 9 675 929 0 0 0 chrUextra 11837615 11837717 -17166939 - NTS_DM Other Other -107 133 32 9 675 27 29 0 0 chrUextra 11838062 11838096 -17166560 + AT_rich Low_complexity Low_complexity 1 34 0 9 675 265 91 0 0 chrUextra 11838335 11838368 -17166288 + Baggins1 LINE LOA 4727 4759 -694 9 675 769 103 241 0 chrUextra 11838373 11838518 -17166138 - FB4_DM DNA Tc1 -3907 182 3 9 675 6137 35 9 3 chrUextra 11838661 11839405 -17165251 + MDG1_I LTR Gypsy 1273 2021 -4575 9 675 402 257 114 96 chrUextra 11839929 11840209 -17164447 - Invader1_LTR LTR Gypsy -55 368 84 9 675 6746 1 1 5 chrUextra 11840349 11841093 -17163563 - LSU-rRNA_Dme rRNA rRNA -2552 1348 608 9 675 1156 25 251 0 chrUextra 11841194 11841357 -17163299 - R1_DM LINE R1 -1806 3550 3347 9 675 4888 41 2 0 chrUextra 11841353 11841937 -17162719 - R1_DM LINE R1 -2696 2660 2076 9 675 6658 11 0 0 chrUextra 11842037 11842781 -17161875 - DOC2_DM LINE Jockey -1291 3502 2759 9 675 3393 177 15 21 chrUextra 11842881 11843625 -17161031 - SAR_DM Satellite Satellite -321 1151 413 9 675 6721 3 0 1 chrUextra 11843725 11844469 -17160187 + R1_DM LINE R1 2520 3262 -2094 9 675 339 65 0 0 chrUextra 11844570 11844616 -17160040 + (TTCTC)n Simple_repeat Simple_repeat 3 48 0 9 675 786 262 22 18 chrUextra 11845444 11845720 -17158936 - QUASIMODO_I LTR Gypsy -257 5803 5527 9 675 2323 106 64 11 chrUextra 11845712 11846151 -17158505 + PROTOP_B DNA P 176 637 -516 9 675 3276 196 13 27 chrUextra 11846258 11847001 -17157655 + SAR_DM Satellite Satellite 1 732 -203 9 675 21 0 0 0 chrUextra 11847425 11847446 -17157210 + AT_rich Low_complexity Low_complexity 1 21 0 9 675 2127 13 4 0 chrUextra 11847945 11848182 -17156474 - DM176_I LTR Gypsy -6182 238 1 9 675 3110 47 57 74 chrUextra 11848182 11848684 -17155972 - DM176_LTR LTR Gypsy -27 480 1 9 675 426 71 0 0 chrUextra 11848789 11848845 -17155811 + R1_DM LINE R1 4778 4833 -523 9 675 2971 20 57 0 chrUextra 11848845 11848993 -17155663 - Stalker3_LTR LTR Gypsy 0 372 225 9 675 189 0 0 0 chrUextra 11848993 11849014 -17155642 + (CTTAT)n Simple_repeat Simple_repeat 2 22 0 9 675 2971 20 57 0 chrUextra 11849014 11849217 -17155439 - Stalker3_LTR LTR Gypsy -148 224 2 9 675 362 0 0 0 chrUextra 11849217 11849257 -17155399 - STALKER4_I LTR Gypsy 0 6530 6491 9 675 211 82 19 58 chrUextra 11849273 11849325 -17155331 + T-rich Low_complexity Low_complexity 2 51 0 9 675 23 0 0 0 chrUextra 11849325 11849348 -17155308 + AT_rich Low_complexity Low_complexity 1 23 0 9 675 284 48 24 0 chrUextra 11849359 11849401 -17155255 + (TTTTA)n Simple_repeat Simple_repeat 4 46 0 9 675 25 31 0 0 chrUextra 11849500 11849532 -17155124 + AT_rich Low_complexity Low_complexity 1 32 0 9 675 6361 34 0 0 chrUextra 11849633 11850377 -17154279 - ACCORD2_I LTR Gypsy -1722 5490 4747 9 675 5502 3 0 0 chrUextra 11850477 11851067 -17153589 - LSU-rRNA_Dme rRNA rRNA -733 3167 2578 9 675 1455 6 0 0 chrUextra 11851063 11851221 -17153435 - R2_DM LINE R2 -9 3598 3441 9 675 1044 0 0 0 chrUextra 11851949 11852065 -17152591 + (TTCTC)n Simple_repeat Simple_repeat 4 119 0 9 675 6426 28 0 0 chrUextra 11852165 11852909 -17151747 - R1_DM LINE R1 -2195 3161 2418 9 675 1212 59 0 0 chrUextra 11853009 11853161 -17151495 - DMTOM1_LTR LTR Gypsy -98 312 161 9 675 811 183 10 61 chrUextra 11853291 11853489 -17151167 + Gypsy5_LTR LTR Gypsy 1 188 -242 9 675 345 87 22 0 chrUextra 11853612 11853658 -17150998 + Gypsy5_I LTR Gypsy 1 47 -6462 9 675 4534 111 62 28 chrUextra 11853853 11854597 -17150059 + HETA LINE telomeric 5266 6034 -47 9 675 341 0 0 0 chrUextra 11854697 11854734 -17149922 - DM1731_LTR LTR Copia -295 41 5 9 675 1500 25 0 0 chrUextra 11854734 11855089 -17149567 + (TATAA)n Simple_repeat Simple_repeat 1 355 0 9 675 2892 33 0 0 chrUextra 11855089 11855424 -17149232 - DM1731_LTR LTR Copia -1 335 1 9 675 5536 84 39 12 chrUextra 11855541 11856285 -17148371 + Gypsy12_I LTR Gypsy 4708 5471 -75 9 675 990 41 25 0 chrUextra 11856385 11856506 -17148150 - BLOOD_I LTR Gypsy -6458 155 32 9 675 2013 47 8 45 chrUextra 11856634 11856902 -17147754 - BLOOD_LTR LTR Gypsy -141 258 1 9 675 309 28 0 0 chrUextra 11856902 11856938 -17147718 - FW_DM LINE Jockey -334 4358 4323 9 675 705 159 206 0 chrUextra 11856939 11857128 -17147528 - FW_DM LINE Jockey -3901 791 564 9 675 26 50 0 0 chrUextra 11857286 11857326 -17147330 + AT_rich Low_complexity Low_complexity 1 40 0 9 675 5332 15 3 2 chrUextra 11857380 11857973 -17146683 + LINEJ1_DM LINE Jockey 4 597 -4423 9 675 6849 1 3 1 chrUextra 11858073 11858817 -17145839 + LSU-rRNA_Dme rRNA rRNA 1805 2549 -1351 9 675 2012 285 18 33 chrUextra 11858938 11859656 -17145000 - FROGGER_I LTR Copia -856 1221 515 9 675 6274 26 0 12 chrUextra 11859761 11860505 -17144151 + FW_DM LINE Jockey 996 1730 -2962 9 675 2664 82 62 16 chrUextra 11860605 11861349 -17143307 - DMSAT6 Satellite Satellite -50 778 1 9 675 6400 9 1 1 chrUextra 11861449 11862193 -17142463 + IDEFIX_I LTR Gypsy 4460 5203 -425 9 675 6096 1 3 3 chrUextra 11862294 11862960 -17141696 + SSU-rRNA_Dme rRNA rRNA 1319 1984 -11 9 675 5987 28 4 12 chrUextra 11863157 11863881 -17140775 - BATUMI_I LTR Pao -5356 2607 1890 9 675 3099 194 17 22 chrUextra 11863981 11864705 -17139951 + SAR_DM Satellite Satellite 462 1181 -291 9 675 225 88 29 0 chrUextra 11864691 11864725 -17139931 - ARS406_DM Unknown Unknown -164 189 155 9 675 4344 27 27 0 chrUextra 11864827 11865343 -17139313 + FW_DM LINE Jockey 4159 4688 -4 9 675 1837 53 0 0 chrUextra 11865344 11865569 -17139087 - R1_DM LINE R1 -3966 1390 1166 9 675 5375 10 0 0 chrUextra 11865669 11866272 -17138384 + PROTOP_A DNA P 503 1105 0 9 675 1126 84 13 0 chrUextra 11866272 11866413 -17138243 + DOC3_DM LINE Jockey 1740 1882 -2858 9 675 6645 5 42 3 chrUextra 11866513 11867257 -17137399 + Gypsy4_I LTR Gypsy 2394 3166 -3122 9 675 3313 203 10 20 chrUextra 11867357 11868099 -17136557 + SAR_DM Satellite Satellite 1 734 -198 9 675 3556 97 0 50 chrUextra 11868201 11868779 -17135877 - R1_DM LINE R1 -4234 1122 574 9 675 988 107 30 30 chrUextra 11868780 11868944 -17135712 - R1_DM LINE R1 -5184 172 9 9 675 1146 52 39 0 chrUextra 11869045 11869200 -17135456 + QUASIMODO_I LTR Gypsy 5014 5174 -886 9 675 1773 58 16 0 chrUextra 11869190 11869447 -17135209 + QUASIMODO_I LTR Gypsy 5467 5727 -333 9 675 787 196 65 75 chrUextra 11869498 11869785 -17134871 + QUASIMODO_LTR LTR Gypsy 29 443 -215 9 675 6734 3 1 0 chrUextra 11869889 11870633 -17134023 + ROO_I LTR Pao 5599 6343 -1913 9 675 3456 182 22 14 chrUextra 11870737 11871471 -17133185 + SAR_DM Satellite Satellite 373 1112 -360 9 675 3652 0 0 0 chrUextra 11871933 11872321 -17132335 - ROO_LTR LTR Pao 0 428 41 9 675 1093 163 102 15 chrUextra 11872454 11872659 -17131997 + DMLTR5 LTR Gypsy 40 262 -4 9 675 2480 108 95 22 chrUextra 11872660 11873124 -17131532 + HMSBEAGLE_I LTR Gypsy 2 499 -6030 9 675 5882 22 5 36 chrUextra 11873266 11874009 -17130647 - DOC2_DM LINE Jockey -3259 1534 815 9 675 6444 27 1 0 chrUextra 11874109 11874853 -17129803 - R1_DM LINE R1 -2362 2994 2250 9 675 6819 3 1 1 chrUextra 11874953 11875697 -17128959 + DOC LINE Jockey 3716 4459 -266 9 675 6080 17 4 0 chrUextra 11875797 11876494 -17128162 - DOC2_DM LINE Jockey -3203 1590 891 9 675 2098 0 0 0 chrUextra 11878005 11878229 -17126427 + ROO_LTR LTR Pao 1 224 -204 9 675 6491 25 1 0 chrUextra 11878329 11879073 -17125583 + G5_DM LINE Jockey 586 1330 -3526 9 675 3446 189 7 7 chrUextra 11879173 11879907 -17124749 - SAR_DM Satellite Satellite -518 954 221 9 675 471 120 0 0 chrUextra 11879842 11879917 -17124739 + ARS406_DM Unknown Unknown 1 75 -278 9 675 254 306 103 30 chrUextra 11880240 11880405 -17124251 - Gypsy6_I LTR Gypsy -2298 4714 4538 9 675 4392 0 0 0 chrUextra 11880861 11881337 -17123319 - ROO_I LTR Pao -7780 476 1 9 675 2500 4 0 0 chrUextra 11881337 11881605 -17123051 - ROO_LTR LTR Pao 0 428 161 9 675 4979 7 0 0 chrUextra 11881705 11882251 -17122405 + R1_DM LINE R1 4811 5356 0 9 675 1811 5 0 10 chrUextra 11882249 11882449 -17122207 + LSU-rRNA_Dme rRNA rRNA 2640 2837 -1063 9 675 6629 0 1 1 chrUextra 11883393 11884137 -17120519 + R1_DM LINE R1 643 1386 -3970 9 675 1416 13 0 6 chrUextra 11884822 11884981 -17119675 - SSU-rRNA_Dme rRNA rRNA 0 1995 1838 9 675 5360 3 0 10 chrUextra 11885081 11885678 -17118978 + Invader1_I LTR Gypsy 2596 3186 0 9 675 1340 7 0 0 chrUextra 11885678 11885825 -17118831 + Invader1_LTR LTR Gypsy 1 147 -276 9 675 6735 3 0 1 chrUextra 11886769 11887513 -17117143 + DOC LINE Jockey 1126 1868 -2857 9 675 1343 26 0 0 chrUextra 11887613 11887766 -17116890 - PROTOP DNA P -4180 300 148 9 675 2572 48 6 0 chrUextra 11888018 11888333 -17116323 - PROTOP DNA P 0 4480 4164 9 675 1533 309 88 21 chrUextra 11888466 11889194 -17115462 - MICROPIA_I LTR Gypsy -1718 2758 1982 9 675 3085 197 19 20 chrUextra 11889305 11890045 -17114611 - SAR_DM Satellite Satellite -291 1181 443 9 675 268 196 0 19 chrUextra 11890157 11890209 -17114447 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 675 25 0 0 0 chrUextra 11890211 11890236 -17114420 + AT_rich Low_complexity Low_complexity 1 25 0 9 675 241 163 0 58 chrUextra 11890255 11890307 -17114349 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2570 9 675 241 163 0 58 chrUextra 11890355 11890407 -17114249 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2570 9 675 25 0 0 0 chrUextra 11890409 11890434 -17114222 + AT_rich Low_complexity Low_complexity 1 25 0 9 675 3594 0 0 0 chrUextra 11890506 11890889 -17113767 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 9 675 1657 6 0 0 chrUextra 11890989 11891168 -17113488 - LSU-rRNA_Dme rRNA rRNA -1082 2818 2640 9 675 5158 7 0 0 chrUextra 11891166 11891733 -17112923 - R1_DM LINE R1 0 5356 4790 9 675 753 12 0 0 chrUextra 11891833 11891915 -17112741 - NTS_DM Other Other -158 82 1 9 675 1899 17 17 17 chrUextra 11891915 11892155 -17112501 - NTS_DM Other Other 0 240 1 9 675 1887 21 17 17 chrUextra 11892155 11892395 -17112261 - NTS_DM Other Other 0 240 1 9 675 1286 28 22 22 chrUextra 11892395 11892577 -17112079 - NTS_DM Other Other 0 240 59 9 675 1248 7 0 0 chrUextra 11892677 11892816 -17111840 - G6_DM LINE Jockey -1903 139 1 9 675 786 0 0 11 chrUextra 11892816 11892904 -17111752 - NTS_DM Other Other -153 87 1 9 675 1995 4 17 13 chrUextra 11892904 11893143 -17111513 - NTS_DM Other Other 0 240 1 9 675 1881 21 17 17 chrUextra 11893143 11893383 -17111273 - NTS_DM Other Other 0 240 1 9 675 617 101 48 39 chrUextra 11893521 11893624 -17111032 - PROTOP_B DNA P -4 1149 1046 9 675 248 94 0 0 chrUextra 11893625 11893657 -17110999 - Invader3_I LTR Gypsy -3417 1471 1440 9 675 2001 238 118 14 chrUextra 11893661 11894248 -17110408 - Invader3_I LTR Gypsy -4043 845 198 9 675 2893 175 9 11 chrUextra 11894365 11894986 -17109670 - SAR_DM Satellite Satellite -444 742 1 9 675 765 107 8 8 chrUextra 11894986 11895109 -17109547 + ARS406_DM Unknown Unknown 1 123 -230 9 675 1755 317 14 14 chrUextra 11895236 11895952 -17108704 + Invader6_I LTR Gypsy 1366 2081 -2018 9 675 6337 20 1 5 chrUextra 11896052 11896795 -17107861 + R1_DM LINE R1 3772 4511 -845 9 675 6394 9 1 0 chrUextra 11896896 11897638 -17107018 - R1_DM LINE R1 -4242 1114 372 9 675 348 328 0 0 chrUextra 11897738 11897872 -17106784 + (TCG)n Simple_repeat Simple_repeat 2 135 0 9 675 6213 35 51 0 chrUextra 11898581 11899323 -17105333 - DMCR1A LINE CR1 -3036 1434 655 9 675 4140 2 2 0 chrUextra 11899427 11899900 -17104756 - I_DM LINE I -5658 573 100 9 675 1620 4 0 0 chrUextra 11899900 11900167 -17104489 + (CTTAT)n Simple_repeat Simple_repeat 1 267 0 9 675 6746 0 3 5 chrUextra 11900269 11901010 -17103646 - SSU-rRNA_Dme rRNA rRNA -140 1855 1117 9 675 1915 48 0 0 chrUextra 11901110 11901340 -17103316 + DM1731_LTR LTR Copia 107 336 0 9 675 1715 59 32 0 chrUextra 11901953 11902174 -17102482 + R1_DM LINE R1 5060 5287 -69 9 675 4443 24 0 0 chrUextra 11902196 11902692 -17101964 + R2_DM LINE R2 1932 2427 -1180 9 675 386 0 22 0 chrUextra 11902796 11902841 -17101815 - SSU-rRNA_Dme rRNA rRNA -1949 46 1 9 675 293 0 27 0 chrUextra 11902938 11902975 -17101681 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 675 28 48 0 0 chrUextra 11903203 11903245 -17101411 + AT_rich Low_complexity Low_complexity 1 42 0 9 675 6696 1 0 0 chrUextra 11903639 11904382 -17100274 + QUASIMODO_I LTR Gypsy 1407 2149 -3911 9 675 3260 6 0 3 chrUextra 11904482 11904847 -17099809 - R1_DM LINE R1 -193 5163 4800 9 675 3397 8 0 0 chrUextra 11904854 11905225 -17099431 - R1_DM LINE R1 0 5356 4986 9 675 1002 273 3 8 chrUextra 11905326 11905714 -17098942 + Gypsy11_I LTR Gypsy 3002 3387 -137 9 675 186 71 0 0 chrUextra 11905883 11905911 -17098745 + (A)n Simple_repeat Simple_repeat 1 28 0 9 675 284 48 24 0 chrUextra 11906013 11906055 -17098601 + (TAAAA)n Simple_repeat Simple_repeat 4 46 0 9 675 6557 8 0 0 chrUextra 11906168 11906911 -17097745 + DM297_I LTR Gypsy 3294 4036 -2131 9 675 1460 12 0 0 chrUextra 11907011 11907173 -17097483 + FW_DM LINE Jockey 872 1033 -3659 9 675 4767 25 37 0 chrUextra 11907171 11907742 -17096914 + FW_DM LINE Jockey 1271 1862 -2830 9 675 6626 4 0 0 chrUextra 11907854 11908597 -17096059 + ROO_I LTR Pao 672 1414 -6842 9 675 978 17 0 0 chrUextra 11908697 11908813 -17095843 + (CACAA)n Simple_repeat Simple_repeat 2 117 0 9 675 5548 13 2 0 chrUextra 11908814 11909440 -17095216 + DMRT1B LINE R1 2292 2918 -2265 9 675 687 0 31 31 chrUextra 11909540 11909635 -17095021 + NTS_DM Other Other 130 224 -16 9 675 3999 2 0 0 chrUextra 11909635 11910063 -17094593 - ROO_LTR LTR Pao 0 428 1 9 675 1717 0 0 10 chrUextra 11910083 11910283 -17094373 + NTS_DM Other Other 1 198 -42 9 675 330 213 133 0 chrUextra 11911047 11911122 -17093534 - Gypsy12_I LTR Gypsy -2217 3329 3245 9 675 563 279 67 0 chrUextra 11911749 11911914 -17092742 - Gypsy12_I LTR Gypsy -2217 3329 3154 9 675 25 75 0 0 chrUextra 11912336 11912389 -17092267 + AT_rich Low_complexity Low_complexity 1 53 0 9 675 2130 8 0 0 chrUextra 11912432 11912672 -17091984 - ALUII_DM Unknown Unknown 0 240 1 9 675 21 57 0 0 chrUextra 11912672 11912707 -17091949 + AT_rich Low_complexity Low_complexity 1 35 0 9 675 6101 43 0 0 chrUextra 11912940 11913655 -17091001 + BATUMI_I LTR Pao 3603 4317 -3646 9 675 6474 24 1 0 chrUextra 11914598 11915341 -17089315 + R1_DM LINE R1 2105 2848 -2508 9 675 6738 3 0 0 chrUextra 11915441 11916184 -17088472 - DMRT1B LINE R1 -188 4995 4253 9 675 6564 8 3 0 chrUextra 11916284 11917027 -17087629 + STALKER4_I LTR Gypsy 5342 6086 -444 9 675 3368 182 12 11 chrUextra 11917128 11917857 -17086799 - SAR_DM Satellite Satellite -514 958 229 9 675 423 103 15 0 chrUextra 11917802 11917870 -17086786 + ARS406_DM Unknown Unknown 1 69 -284 9 675 2453 182 14 23 chrUextra 11918814 11919495 -17085161 - SAR_DM Satellite Satellite -798 675 1 9 675 6643 7 1 0 chrUextra 11919656 11920399 -17084257 + STALKER4_I LTR Gypsy 5432 6175 -355 9 675 1676 0 0 10 chrUextra 11920499 11920696 -17083960 - TIRANT_I LTR Gypsy -7497 195 1 9 675 3418 15 48 0 chrUextra 11920696 11921094 -17083562 - TIRANT_LTR LTR Gypsy 0 417 1 9 675 3772 57 65 0 chrUextra 11921388 11922085 -17082571 - PROTOP_A DNA P 0 1105 499 9 675 6564 16 3 0 chrUextra 11922185 11922928 -17081728 - R1_DM LINE R1 -2951 2405 1661 9 675 693 0 0 0 chrUextra 11923028 11923105 -17081551 + (GAGAA)n Simple_repeat Simple_repeat 2 78 0 9 675 2155 8 4 35 chrUextra 11923871 11924128 -17080528 + ROVER-LTR_DM LTR Gypsy 119 367 0 9 675 3198 0 0 150 chrUextra 11924128 11924614 -17080042 + ROVER-I_DM LTR Gypsy 1 413 -6171 9 675 1418 37 0 0 chrUextra 11924714 11924878 -17079778 + R1_DM LINE R1 5075 5238 -118 9 675 1381 62 0 17 chrUextra 11924861 11925042 -17079614 + R1_DM LINE R1 224 401 -4955 9 675 3173 40 62 0 chrUextra 11925053 11925457 -17079199 + R1_DM LINE R1 721 1149 -4207 9 675 6454 23 1 0 chrUextra 11925557 11926300 -17078356 - R1_DM LINE R1 -1679 3677 2934 9 675 2705 110 20 15 chrUextra 11926405 11927143 -17077513 - DMSAT6 Satellite Satellite -48 741 1 9 84 6642 20 0 0 chrUextra 11927243 11927986 -17076670 + MDG1_I LTR Gypsy 3855 4597 -1999 9 676 6944 1 0 0 chrUextra 11928086 11928829 -17075827 - R2_DM LINE R2 -1876 1731 989 9 676 6920 0 3 0 chrUextra 11928929 11929672 -17074984 + SSU-rRNA_Dme rRNA rRNA 280 1024 -971 9 676 268 196 0 19 chrUextra 11929840 11929892 -17074764 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 676 268 196 0 19 chrUextra 11929932 11929984 -17074672 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 676 278 176 0 19 chrUextra 11930015 11930067 -17074589 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 676 22 56 0 0 chrUextra 11930080 11930116 -17074540 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 936 9 0 27 chrUextra 11930142 11930254 -17074402 + NTS_DM Other Other 25 133 -107 9 676 1297 37 0 6 chrUextra 11930254 11930419 -17074237 + NTS_DM Other Other 38 201 -39 9 676 293 26 0 93 chrUextra 11930472 11930515 -17074141 + NTS_DM Other Other 25 63 -177 9 676 5412 39 3 9 chrUextra 11930615 11931270 -17073386 + BATUMI_I LTR Pao 1957 2607 -5356 9 676 377 133 83 0 chrUextra 11931296 11931356 -17073300 + BATUMI_I LTR Pao 2599 2663 -5300 9 676 434 285 72 63 chrUextra 11931460 11931718 -17072938 - MICROPIA_I LTR Gypsy -3080 254 1 9 676 314 321 24 89 chrUextra 11931745 11931991 -17072665 - ACCORD2_I LTR Gypsy -6457 755 526 9 676 3193 198 12 21 chrUextra 11933144 11933886 -17070770 + SAR_DM Satellite Satellite 1 735 -203 9 676 5446 40 0 44 chrUextra 11933987 11934730 -17069926 - MAX_I LTR Pao -183 7731 7022 9 676 6604 12 0 1 chrUextra 11934830 11935573 -17069083 + QUASIMODO_I LTR Gypsy 2587 3328 -2732 9 676 940 0 0 0 chrUextra 11935673 11935776 -17068880 - NOMAD_I LTR Gypsy -6469 103 1 9 676 4709 8 0 0 chrUextra 11935776 11936294 -17068362 - NOMAD_LTR LTR Gypsy 0 518 1 9 676 422 0 136 0 chrUextra 11936294 11936412 -17068244 + (TA)n Simple_repeat Simple_repeat 1 134 0 9 676 4256 6 4 0 chrUextra 11936516 11936998 -17067658 + Invader4_I LTR Gypsy 1930 2413 0 9 676 2410 4 0 0 chrUextra 11936998 11937259 -17067397 + Invader4_LTR LTR Gypsy 1 261 -85 9 676 3228 186 19 25 chrUextra 11937359 11938098 -17066558 + SAR_DM Satellite Satellite 1 734 -203 9 676 371 35 69 17 chrUextra 11938202 11938260 -17066396 - HMSBEAGLE_I LTR Gypsy -6468 61 1 9 676 766 193 0 7 chrUextra 11938259 11938405 -17066251 - DMLTR5 LTR Gypsy 0 266 122 9 676 356 257 118 99 chrUextra 11938673 11938945 -17065711 + Invader1_LTR LTR Gypsy 84 360 -63 9 676 2610 17 0 0 chrUextra 11939045 11939335 -17065321 + DMRT1B LINE R1 4894 5183 0 9 676 471 105 133 0 chrUextra 11939342 11939447 -17065209 + TART_B1 LINE telomeric 2221 2339 -8315 9 676 3017 29 0 0 chrUextra 11939445 11939788 -17064868 + DMRT1A LINE R1 3602 3944 -1239 9 676 6717 5 1 0 chrUextra 11939889 11940631 -17064025 + FW_DM LINE Jockey 2195 2937 -1755 9 676 813 37 0 115 chrUextra 11941041 11941163 -17063493 - Baggins1 LINE LOA 0 5453 5346 9 676 6961 1 0 0 chrUextra 11941574 11942317 -17062339 + SSU-rRNA_Dme rRNA rRNA 224 966 -1029 9 676 23 0 0 0 chrUextra 11942818 11942841 -17061815 + AT_rich Low_complexity Low_complexity 1 23 0 9 676 6933 1 0 1 chrUextra 11943260 11944003 -17060653 + SSU-rRNA_Dme rRNA rRNA 175 916 -1079 9 676 1252 18 0 6 chrUextra 11944119 11944284 -17060372 - NTS_DM Other Other -39 201 38 9 676 843 18 0 27 chrUextra 11944284 11944396 -17060260 - NTS_DM Other Other -107 133 25 9 676 1252 18 0 6 chrUextra 11944448 11944613 -17060043 - NTS_DM Other Other -39 201 38 9 676 870 9 0 27 chrUextra 11944613 11944725 -17059931 - NTS_DM Other Other -107 133 25 9 676 22 56 0 0 chrUextra 11944751 11944787 -17059869 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 255 125 0 0 chrUextra 11944800 11944840 -17059816 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 676 6434 3 1 0 chrUextra 11944946 11945689 -17058967 + DOC LINE Jockey 3189 3932 -793 9 676 6408 4 0 0 chrUextra 11945789 11946532 -17058124 + DMRT1A LINE R1 1428 2170 -3013 9 676 5564 1 5 65 chrUextra 11946632 11947375 -17057281 - LSU-rRNA_Dme rRNA rRNA -1938 1962 1264 9 676 647 239 56 60 chrUextra 11947488 11947773 -17056883 + GTWIN_LTR LTR Gypsy 122 405 -90 9 676 26 88 0 0 chrUextra 11948051 11948119 -17056537 + AT_rich Low_complexity Low_complexity 1 68 0 9 676 22 0 0 0 chrUextra 11948161 11948183 -17056473 + AT_rich Low_complexity Low_complexity 1 22 0 9 676 1441 30 81 29 chrUextra 11948318 11948524 -17056132 - BATUMI_I LTR Pao -745 7218 7002 9 676 4402 11 0 6 chrUextra 11948524 11949061 -17055595 - BATUMI_I LTR Pao 0 7963 7430 9 676 5869 8 0 3 chrUextra 11949161 11949904 -17054752 - QUASIMODO_I LTR Gypsy -600 5460 4720 9 676 6400 0 3 0 chrUextra 11950004 11950747 -17053909 - BLOOD_I LTR Gypsy -1910 4703 3959 9 676 366 307 50 46 chrUextra 11951350 11951589 -17053067 - Gypsy4_I LTR Gypsy -2815 3473 3234 9 676 2605 46 4 110 chrUextra 11951691 11952155 -17052501 - NINJA_I LTR Pao -5596 415 1 9 676 2175 36 0 7 chrUextra 11952156 11952433 -17052223 - NINJA_LTR LTR Pao -1 316 42 9 676 2882 183 8 9 chrUextra 11952533 11953276 -17051380 - SAR_DM Satellite Satellite -265 1207 192 9 676 1232 24 0 6 chrUextra 11953399 11953564 -17051092 - NTS_DM Other Other -39 201 38 9 676 870 9 0 27 chrUextra 11953564 11953676 -17050980 - NTS_DM Other Other -107 133 25 9 676 1252 18 0 6 chrUextra 11953728 11953893 -17050763 - NTS_DM Other Other -39 201 38 9 676 870 9 0 27 chrUextra 11953893 11954005 -17050651 - NTS_DM Other Other -107 133 25 9 676 22 56 0 0 chrUextra 11954031 11954067 -17050589 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 245 128 0 0 chrUextra 11954080 11954119 -17050537 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2582 9 676 4806 22 72 0 chrUextra 11954222 11954962 -17049694 + R1_DM LINE R1 3862 4654 -702 9 676 4026 11 0 0 chrUextra 11955062 11955532 -17049124 - G2_DM LINE Jockey -2464 638 169 9 676 2241 32 0 0 chrUextra 11955527 11955804 -17048852 + STALKER4_I LTR Gypsy 3657 3933 -2597 9 676 31 26 0 0 chrUextra 11957015 11957053 -17047603 + AT_rich Low_complexity Low_complexity 1 38 0 9 676 3434 15 0 0 chrUextra 11957591 11957998 -17046658 + R1_DM LINE R1 4950 5356 0 9 676 2146 63 7 0 chrUextra 11958031 11958330 -17046326 + R1_DM LINE R1 1 301 -5055 9 676 6170 5 1 4 chrUextra 11958435 11959177 -17045479 + Gypsy4_I LTR Gypsy 4791 5530 -758 9 676 204 40 0 0 chrUextra 11959556 11959581 -17045075 + (TTG)n Simple_repeat Simple_repeat 2 26 0 9 676 1742 53 0 0 chrUextra 11959781 11960007 -17044649 + PROTOP DNA P 74 299 -4181 9 676 5928 1 46 7 chrUextra 11960120 11960863 -17043793 - ROO_I LTR Pao -7469 787 16 9 676 246 125 0 0 chrUextra 11960996 11961036 -17043620 - HMSBEAGLE_I LTR Gypsy -6315 214 175 9 676 244 128 0 21 chrUextra 11961259 11961307 -17043349 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 676 244 128 0 21 chrUextra 11961552 11961600 -17043056 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 676 327 66 65 16 chrUextra 11961619 11961681 -17042975 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 676 1835 23 0 0 chrUextra 11962654 11962874 -17041782 - STALKER4_LTR LTR Gypsy -182 220 1 9 676 2926 8 10 5 chrUextra 11962874 11963271 -17041385 - STALKER4_I LTR Gypsy 0 6530 6132 9 676 914 27 0 0 chrUextra 11963271 11963382 -17041274 - PROTOP_A DNA P 0 1105 995 9 676 2713 0 3 3 chrUextra 11963492 11963807 -17040849 + SSU-rRNA_Dme rRNA rRNA 1681 1995 0 9 676 21 89 0 0 chrUextra 11963826 11963882 -17040774 + AT_rich Low_complexity Low_complexity 1 56 0 9 676 6245 15 3 0 chrUextra 11964335 11965078 -17039578 + DM1731_I LTR Copia 2491 3235 -741 9 676 389 189 18 18 chrUextra 11965187 11965300 -17039356 + XDMR_DM Unknown Unknown 248 360 0 9 676 2986 176 7 21 chrUextra 11965215 11965921 -17038735 - SAR_DM Satellite Satellite -355 1117 422 9 676 3759 191 0 0 chrUextra 11966864 11967606 -17037050 + ROVER-I_DM LTR Gypsy 2838 3579 -3005 9 676 810 102 0 0 chrUextra 11968551 11968688 -17035968 + ARS406_DM Unknown Unknown 22 158 -195 9 676 2770 162 7 7 chrUextra 11968695 11969273 -17035383 - SAR_DM Satellite Satellite -569 903 326 9 676 695 40 61 0 chrUextra 11969415 11969514 -17035142 + DNAREP1_DM LINE Penelope 2 106 -488 9 676 30 45 0 0 chrUextra 11969660 11969704 -17034952 + AT_rich Low_complexity Low_complexity 1 44 0 9 676 30 45 0 0 chrUextra 11970306 11970350 -17034306 + AT_rich Low_complexity Low_complexity 1 44 0 9 676 6219 1 1 0 chrUextra 11971079 11971822 -17032834 + DM176_I LTR Gypsy 4480 5223 -1197 9 676 2936 187 52 26 chrUextra 11971933 11972665 -17031991 + Gypsy12_LTR LTR Gypsy 1503 2253 -83 9 676 3127 5 2 18 chrUextra 11972765 11973158 -17031498 + Invader1_I LTR Gypsy 2800 3186 0 9 676 3034 3 3 0 chrUextra 11973158 11973508 -17031148 + Invader1_LTR LTR Gypsy 1 351 -72 9 676 359 0 0 0 chrUextra 11973608 11973652 -17031004 + ARS406_DM Unknown Unknown 104 147 -206 9 676 2986 180 7 11 chrUextra 11973652 11974348 -17030308 - SAR_DM Satellite Satellite -498 974 282 9 676 3225 162 15 23 chrUextra 11974453 11975194 -17029462 - SAR_DM Satellite Satellite -361 1111 377 9 676 369 261 94 16 chrUextra 11975419 11975663 -17028993 + Gypsy7_I LTR Gypsy 1560 1852 -4008 9 676 2579 47 3 23 chrUextra 11975689 11976037 -17028619 - G5A_DM LINE Jockey -3 2838 2498 9 676 6417 1 3 0 chrUextra 11976137 11976880 -17027776 + R1_DM LINE R1 3891 4635 -721 9 676 247 21 80 60 chrUextra 11976980 11977030 -17027626 + NTS_DM Other Other 190 240 0 9 676 1726 17 17 21 chrUextra 11977030 11977271 -17027385 + NTS_DM Other Other 1 240 0 9 676 1828 8 17 13 chrUextra 11977271 11977510 -17027146 + NTS_DM Other Other 1 240 0 9 676 1721 5 14 0 chrUextra 11977510 11977722 -17026934 + NTS_DM Other Other 1 215 -25 9 676 4673 0 0 0 chrUextra 11977823 11978370 -17026286 + BARI_DM DNA Tc1 1181 1727 -1 9 676 1607 5 10 0 chrUextra 11978370 11978566 -17026090 + BARI_DM DNA Tc1 4 201 -1527 9 676 6105 18 3 1 chrUextra 11978666 11979409 -17025247 - R1_DM LINE R1 -839 4517 3774 9 676 2883 177 22 29 chrUextra 11979518 11980252 -17024404 - SAR_DM Satellite Satellite -314 1158 430 9 676 22 56 0 0 chrUextra 11980485 11980521 -17024135 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 3522 5 5 0 chrUextra 11981195 11981606 -17023050 + NOMAD_LTR LTR Gypsy 106 518 0 9 676 2874 0 0 0 chrUextra 11981606 11981938 -17022718 + NOMAD_I LTR Gypsy 1 332 -6240 9 676 34 24 0 0 chrUextra 11982245 11982286 -17022370 + AT_rich Low_complexity Low_complexity 1 41 0 9 676 21 95 0 0 chrUextra 11982499 11982562 -17022094 + AT_rich Low_complexity Low_complexity 1 63 0 9 676 1796 0 0 0 chrUextra 11982574 11982781 -17021875 + LSU-rRNA_Dme rRNA rRNA 1 207 -3693 9 676 6237 7 1 1 chrUextra 11982881 11983624 -17021032 + R1_DM LINE R1 3387 4129 -1227 9 676 2957 181 15 20 chrUextra 11983736 11984467 -17020189 - SAR_DM Satellite Satellite -308 1164 438 9 676 6218 7 0 0 chrUextra 11984567 11985309 -17019347 - R1_DM LINE R1 -4385 971 230 9 676 3151 172 9 15 chrUextra 11985412 11986148 -17018508 - SAR_DM Satellite Satellite -549 923 192 9 676 2974 196 14 26 chrUextra 11986253 11986990 -17017666 + SAR_DM Satellite Satellite 1 728 -208 9 676 1610 52 217 10 chrUextra 11987093 11987498 -17017158 + DMCR1A LINE CR1 930 1418 -3052 9 676 883 280 27 50 chrUextra 11987495 11987833 -17016823 - TOM_I LTR Gypsy -1199 4913 4584 9 676 5080 47 3 44 chrUextra 11987953 11988673 -17015983 - BATUMI_I LTR Pao -5196 2767 2078 9 676 23 50 0 48 chrUextra 11989164 11989227 -17015429 + AT_rich Low_complexity Low_complexity 1 60 0 9 676 6173 11 1 0 chrUextra 11989619 11990361 -17014295 + STALKER4_I LTR Gypsy 1426 2168 -4362 9 676 4308 74 5 3 chrUextra 11990461 11991070 -17013586 - R1_DM LINE R1 -4746 610 1 9 676 758 41 0 10 chrUextra 11991105 11991203 -17013453 - R1_DM LINE R1 -2 5354 5258 9 676 2230 174 11 4 chrUextra 11991305 11992041 -17012615 + SAR_DM Satellite Satellite 1 740 -677 9 676 6154 9 3 1 chrUextra 11992145 11992887 -17011769 + R1_DM LINE R1 3339 4081 -1275 9 676 1964 8 0 0 chrUextra 11992987 11993225 -17011431 - ALUII_DM Unknown Unknown -2 238 1 9 676 21 57 0 0 chrUextra 11993225 11993260 -17011396 + AT_rich Low_complexity Low_complexity 1 35 0 9 676 22 35 0 0 chrUextra 11993457 11993486 -17011170 + AT_rich Low_complexity Low_complexity 1 29 0 9 676 37 39 0 0 chrUextra 11993587 11993638 -17011018 + AT_rich Low_complexity Low_complexity 1 51 0 9 676 365 21 21 0 chrUextra 11994523 11994571 -17010085 - SSU-rRNA_Dme rRNA rRNA 0 1995 1947 9 676 6387 3 0 0 chrUextra 11994671 11995413 -17009243 - R1_DM LINE R1 -3141 2215 1474 9 676 3183 177 9 12 chrUextra 11996355 11997097 -17007559 - SAR_DM Satellite Satellite -398 1074 335 9 676 31 0 0 0 chrUextra 11997199 11997230 -17007426 + AT_rich Low_complexity Low_complexity 1 31 0 9 676 28 48 0 0 chrUextra 11997558 11997600 -17007056 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 401 106 45 0 chrUextra 11997873 11997939 -17006717 - NTS_DM Other Other -150 90 22 9 676 1228 117 75 44 chrUextra 11998044 11998374 -17006282 - TAHRE LINE telomeric -10145 318 6 9 676 994 61 0 0 chrUextra 11998372 11998504 -17006152 - HETA LINE telomeric -4584 1497 1366 9 676 1870 93 7 0 chrUextra 11998503 11998781 -17005875 - HETA LINE telomeric -106 5975 5696 9 676 6499 4 0 0 chrUextra 11998881 11999623 -17005033 + MICROPIA_I LTR Gypsy 1999 2740 -1736 9 676 957 37 7 49 chrUextra 11999723 11999865 -17004791 + G5A_DM LINE Jockey 2703 2838 -3 9 676 349 269 0 0 chrUextra 11999892 12000000 -17004656 - Gypsy7_I LTR Gypsy -3317 1667 1560 9 676 324 310 76 17 chrUextra 12000043 12000279 -17004377 - Gypsy7_I LTR Gypsy -3496 1488 1239 9 676 1314 29 6 39 chrUextra 12000280 12000462 -17004194 + G5A_DM LINE Jockey 2663 2838 -3 9 676 5536 3 5 65 chrUextra 12000565 12001307 -17003349 + LSU-rRNA_Dme rRNA rRNA 1174 1871 -2029 9 676 6212 12 1 3 chrUextra 12001407 12002148 -17002508 + IVK_DM LINE I 3474 4213 -1189 9 676 5427 53 0 0 chrUextra 12002249 12002991 -17001665 + QUASIMODO_I LTR Gypsy 3273 4014 -2046 9 676 2996 165 21 11 chrUextra 12003092 12003832 -17000824 - SAR_DM Satellite Satellite -261 1211 195 9 676 488 119 36 0 chrUextra 12004023 12004107 -17000549 + NTS_DM Other Other 4 90 -150 9 676 28 48 0 0 chrUextra 12004380 12004422 -17000234 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 4533 63 3 3 chrUextra 12004793 12005409 -16999247 + R1_DM LINE R1 1 616 -4740 9 676 766 103 87 0 chrUextra 12005391 12005517 -16999139 + R1_DM LINE R1 935 1071 -4285 9 676 6388 0 0 1 chrUextra 12005617 12006359 -16998297 + R1_DM LINE R1 1403 2143 -3213 9 676 29 60 0 0 chrUextra 12006722 12006772 -16997884 + AT_rich Low_complexity Low_complexity 1 50 0 9 676 479 122 100 0 chrUextra 12006888 12006978 -16997678 + DNAREP1_DM LINE Penelope 496 594 0 9 676 26 50 0 0 chrUextra 12007032 12007072 -16997584 + AT_rich Low_complexity Low_complexity 1 40 0 9 676 21 71 0 0 chrUextra 12007096 12007138 -16997518 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 6216 11 9 0 chrUextra 12007303 12008043 -16996613 + DOC2_DM LINE Jockey 1727 2473 -2320 9 676 5708 9 101 0 chrUextra 12008143 12008885 -16995771 + DM176_I LTR Gypsy 4388 5204 -1216 9 676 697 193 0 7 chrUextra 12009338 12009484 -16995172 + DMLTR5 LTR Gypsy 122 266 0 9 676 351 49 65 16 chrUextra 12009483 12009545 -16995111 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 676 244 128 0 21 chrUextra 12009567 12009615 -16995041 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 676 4913 108 0 0 chrUextra 12009827 12010541 -16994115 - Gypsy12_I LTR Gypsy -1003 4543 3830 9 676 6426 4 0 0 chrUextra 12010669 12011411 -16993245 - DOC2_DM LINE Jockey -781 4012 3271 9 676 6200 18 0 0 chrUextra 12011511 12012253 -16992403 + R1_DM LINE R1 3864 4605 -751 9 676 28 48 0 0 chrUextra 12012557 12012599 -16992057 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 32 0 0 0 chrUextra 12012927 12012959 -16991697 + AT_rich Low_complexity Low_complexity 1 32 0 9 676 6489 0 0 0 chrUextra 12013195 12013937 -16990719 - BEL_I LTR Pao -3740 1664 923 9 676 6226 16 1 4 chrUextra 12014037 12014779 -16989877 + BATUMI_I LTR Pao 5256 5995 -1968 9 676 274 314 0 0 chrUextra 12014880 12015087 -16989569 + QUASIMODO_I LTR Gypsy 5737 5943 -117 9 676 34 24 0 0 chrUextra 12015851 12015892 -16988764 + AT_rich Low_complexity Low_complexity 1 41 0 9 676 2892 232 4 1 chrUextra 12016570 12017305 -16987351 + Stalker2_I LTR Gypsy 5229 5965 -1437 9 676 6359 1 0 0 chrUextra 12017405 12018147 -16986509 + STALKER4_I LTR Gypsy 3384 4125 -2405 9 676 2747 198 20 14 chrUextra 12018247 12018981 -16985675 + SAR_DM Satellite Satellite 434 1172 -300 9 676 4196 98 2 2 chrUextra 12019092 12019694 -16984962 - R1_DM LINE R1 -3656 1700 1099 9 676 291 160 74 118 chrUextra 12019694 12019829 -16984827 - R1_DM LINE R1 -4651 705 577 9 676 740 172 0 0 chrUextra 12019931 12020076 -16984580 - ARS406_DM Unknown Unknown -208 145 1 9 676 2840 184 14 20 chrUextra 12019973 12020672 -16983984 + SAR_DM Satellite Satellite 185 879 -593 9 676 3025 163 13 15 chrUextra 12020773 12021515 -16983141 - BATUMI_I LTR Pao -3014 4900 4209 9 676 492 151 11 0 chrUextra 12021629 12021722 -16982934 + DM176_LTR LTR Gypsy 131 224 -283 9 676 203 175 0 73 chrUextra 12021983 12022051 -16982605 + A-rich Low_complexity Low_complexity 2 64 0 9 676 496 169 0 0 chrUextra 12022052 12022141 -16982515 + DNAREP1_DM LINE Penelope 1 89 -505 9 676 1806 14 0 0 chrUextra 12022145 12022357 -16982299 + PROTOP_A DNA P 1 212 -893 9 676 656 136 4 45 chrUextra 12022457 12022606 -16982050 + STALKER4_LTR LTR Gypsy 249 399 -3 9 676 35 41 0 0 chrUextra 12022694 12022743 -16981913 + AT_rich Low_complexity Low_complexity 1 49 0 9 676 1847 182 29 22 chrUextra 12022743 12023197 -16981459 + Stalker2_I LTR Gypsy 291 747 -6655 9 676 1469 0 0 0 chrUextra 12023631 12023801 -16980855 - Copia2_LTR_DM LTR Copia 0 198 29 9 676 2076 4 0 0 chrUextra 12023801 12024041 -16980615 - Invader1_LTR LTR Gypsy 0 423 184 9 676 21 89 0 0 chrUextra 12024562 12024618 -16980038 + AT_rich Low_complexity Low_complexity 1 56 0 9 676 2142 0 4 0 chrUextra 12024637 12024883 -16979773 - SSU-rRNA_Dme rRNA rRNA 0 1995 1749 9 676 2925 178 13 17 chrUextra 12024984 12025724 -16978932 + SAR_DM Satellite Satellite 1 736 -397 9 676 2210 35 0 3 chrUextra 12025829 12026113 -16978543 - NINJA_I LTR Pao -260 5751 5469 9 676 3759 20 0 0 chrUextra 12026113 12026567 -16978089 + PROTOP_A DNA P 1 454 -651 9 676 246 150 0 0 chrUextra 12026671 12026711 -16977945 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 676 22 56 0 0 chrUextra 12026716 12026752 -16977904 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 5092 0 2 2 chrUextra 12026824 12027409 -16977247 - LSU-rRNA_Dme rRNA rRNA 0 3900 3316 9 676 5690 3 1 1 chrUextra 12027509 12028170 -16976486 - R2_DM LINE R2 -2944 663 3 9 676 727 0 0 0 chrUextra 12028168 12028251 -16976405 - LSU-rRNA_Dme rRNA rRNA -1345 2555 2473 9 676 5973 11 0 3 chrUextra 12028351 12029082 -16975574 - STALKER4_I LTR Gypsy -4723 1807 1079 9 676 2605 3 0 0 chrUextra 12029193 12029492 -16975164 + DMRT1A LINE R1 4883 5181 -2 9 676 2996 11 0 0 chrUextra 12029491 12029843 -16974813 + ACCORD_LTR LTR Gypsy 207 558 0 9 676 786 22 0 0 chrUextra 12029843 12029935 -16974721 + ACCORD_I LTR Gypsy 1 92 -6196 9 676 3326 169 14 8 chrUextra 12030037 12030777 -16973879 + SAR_DM Satellite Satellite 282 1025 -447 9 676 2917 191 17 19 chrUextra 12030877 12031611 -16973045 + SAR_DM Satellite Satellite 1 732 -208 9 676 389 55 0 18 chrUextra 12031564 12031619 -16973037 - ARS406_DM Unknown Unknown -164 189 136 9 676 5104 73 15 18 chrUextra 12031719 12032458 -16972198 - R1_DM LINE R1 -4574 782 46 9 676 2315 99 9 29 chrUextra 12032561 12033299 -16971357 - DMSAT6 Satellite Satellite -41 723 1 9 676 6111 23 3 0 chrUextra 12033403 12034145 -16970511 + R1_DM LINE R1 4247 4990 -366 9 676 6210 20 0 0 chrUextra 12034245 12034987 -16969669 - DMRT1A LINE R1 -2433 2750 2009 9 676 3011 182 12 20 chrUextra 12035087 12035828 -16968828 + SAR_DM Satellite Satellite 438 1172 -300 9 676 382 200 80 64 chrUextra 12035951 12036138 -16968518 + DNAREP1_DM LINE Penelope 104 293 -301 9 676 504 77 0 0 chrUextra 12036115 12036191 -16968465 + DNAREP1_DM LINE Penelope 181 256 -338 9 676 507 99 312 6 chrUextra 12036191 12036382 -16968274 + DNAREP1_DM LINE Penelope 1 248 -346 9 676 1742 64 64 0 chrUextra 12036404 12036671 -16967985 - G4_DM LINE Jockey -1 3855 3572 9 676 6373 1 1 1 chrUextra 12036771 12037511 -16967145 + R2_DM LINE R2 107 846 -2761 9 676 543 326 30 29 chrUextra 12037626 12038001 -16966655 - GTWIN_I LTR Gypsy -2883 3538 2950 9 676 243 278 11 11 chrUextra 12038115 12038206 -16966450 - TIRANT_I LTR Gypsy -3464 4228 4138 9 676 528 42 0 0 chrUextra 12038283 12038355 -16966301 - TLD2 Unknown Unknown 0 218 147 9 676 397 0 16 0 chrUextra 12038455 12038516 -16966140 + IDEFIX_LTR LTR Gypsy 533 594 0 9 676 25 0 0 0 chrUextra 12038706 12038731 -16965925 + AT_rich Low_complexity Low_complexity 1 25 0 9 676 1061 0 8 0 chrUextra 12039072 12039197 -16965459 + IDEFIX_I LTR Gypsy 1 126 -5502 9 676 1311 31 12 0 chrUextra 12039297 12039459 -16965197 + DMCR1A LINE CR1 4307 4470 0 9 676 4588 28 21 0 chrUextra 12039458 12040039 -16964617 + DOC3_DM LINE Jockey 811 1403 -3337 9 676 5306 6 0 0 chrUextra 12040139 12040771 -16963885 + STALKER4_I LTR Gypsy 1398 2029 -4501 9 676 840 27 9 0 chrUextra 12040771 12040881 -16963775 + STALKER4_I LTR Gypsy 2334 2444 -4086 9 676 310 200 0 0 chrUextra 12040981 12041051 -16963605 - STALKER4_I LTR Gypsy -6226 304 235 9 676 33 56 0 0 chrUextra 12041052 12041106 -16963550 + AT_rich Low_complexity Low_complexity 1 54 0 9 676 3161 53 1 14 chrUextra 12041192 12041631 -16963025 - STALKER4_LTR LTR Gypsy -3 399 1 9 676 782 0 11 0 chrUextra 12041631 12041723 -16962933 + FW_DM LINE Jockey 3240 3332 -1360 9 676 5850 43 0 1 chrUextra 12041823 12042565 -16962091 + R1_DM LINE R1 1130 1870 -3486 9 676 6497 0 0 1 chrUextra 12042665 12043407 -16961249 + LSU-rRNA_Dme rRNA rRNA 2763 3503 -397 9 676 604 295 28 65 chrUextra 12043515 12044148 -16960508 + GTWIN_I LTR Gypsy 3088 4207 -2365 9 676 6324 4 1 0 chrUextra 12044349 12045091 -16959565 + R1_DM LINE R1 107 849 -4507 9 676 3062 178 27 20 chrUextra 12045193 12045931 -16958725 - SAR_DM Satellite Satellite -361 1111 369 9 676 5685 7 13 0 chrUextra 12046034 12046439 -16958217 - QUASIMODO_I LTR Gypsy -1922 4138 3734 9 676 243 0 0 0 chrUextra 12046439 12046466 -16958190 + (TTAGG)n Simple_repeat Simple_repeat 2 28 0 9 676 5685 7 13 0 chrUextra 12046466 12046775 -16957881 - QUASIMODO_I LTR Gypsy -2327 3733 3416 9 676 1716 5 5 5 chrUextra 12046876 12047082 -16957574 - SSU-rRNA_Dme rRNA rRNA -1789 206 1 9 676 32 0 0 0 chrUextra 12047215 12047247 -16957409 + AT_rich Low_complexity Low_complexity 1 32 0 9 676 28 48 0 0 chrUextra 12047575 12047617 -16957039 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 6102 9 7 1 chrUextra 12048559 12049301 -16955355 + Gypsy4_I LTR Gypsy 4192 4937 -1351 9 676 3046 193 12 21 chrUextra 12049402 12050143 -16954513 + SAR_DM Satellite Satellite 1 734 -208 9 676 1985 8 0 0 chrUextra 12051553 12051793 -16952863 - ALUII_DM Unknown Unknown 0 240 1 9 676 2589 203 14 29 chrUextra 12051928 12052659 -16951997 + SAR_DM Satellite Satellite 399 1118 -354 9 676 255 261 11 0 chrUextra 12052577 12052669 -16951987 - XDMR_DM Unknown Unknown -1 359 267 9 676 339 144 62 0 chrUextra 12052769 12052866 -16951790 + GA-rich Low_complexity Low_complexity 2 104 0 9 676 1429 23 11 0 chrUextra 12052866 12053043 -16951613 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 9 676 3954 44 0 0 chrUextra 12053611 12054110 -16950546 + R1_DM LINE R1 1343 1841 -3515 9 676 1997 28 0 0 chrUextra 12054106 12054353 -16950303 + R1_DM LINE R1 2087 2333 -3023 9 676 6014 1 1 1 chrUextra 12054453 12055195 -16949461 - QUASIMODO_I LTR Gypsy -2076 3984 3243 9 676 4242 25 92 0 chrUextra 12055295 12055960 -16948696 - R1_DM LINE R1 -2657 2699 1974 9 676 639 26 0 0 chrUextra 12055960 12056037 -16948619 - R1_DM LINE R1 -3577 1779 1703 9 676 3130 201 77 5 chrUextra 12056137 12056879 -16947777 + Stalker2_I LTR Gypsy 3653 4447 -2955 9 676 34 24 0 0 chrUextra 12057654 12057695 -16946961 + AT_rich Low_complexity Low_complexity 1 41 0 9 676 959 185 235 0 chrUextra 12058051 12058281 -16946375 - DM412 LTR Gypsy -5045 1852 1569 9 676 24 0 0 0 chrUextra 12058392 12058416 -16946240 + AT_rich Low_complexity Low_complexity 1 24 0 9 676 428 96 169 0 chrUextra 12058480 12058563 -16946093 - DM412B_LTR LTR Gypsy -316 255 159 9 677 3271 208 16 8 chrUextra 12058665 12059391 -16945265 + TABOR_I LTR Gypsy 4183 4914 -1422 9 677 368 303 14 43 chrUextra 12060651 12060858 -16943798 + BLASTOPIA_I LTR Gypsy 3541 3741 -740 9 677 205 179 58 91 chrUextra 12061760 12061914 -16942742 + (CTATT)n Simple_repeat Simple_repeat 5 153 0 9 677 6385 12 7 0 chrUextra 12062031 12062773 -16941883 + QUASIMODO_I LTR Gypsy 2352 3098 -2962 9 677 4726 0 21 0 chrUextra 12062873 12063438 -16941218 + ROO_I LTR Pao 7680 8256 0 9 677 1592 0 0 0 chrUextra 12063438 12063615 -16941041 + ROO_LTR LTR Pao 1 177 -251 9 677 4154 172 57 0 chrUextra 12063722 12064456 -16940200 - Gypsy12_I LTR Gypsy -1799 3747 2972 9 677 510 48 0 0 chrUextra 12064557 12064619 -16940037 - BATUMI_I LTR Pao -3722 4241 4180 9 677 5524 48 1 6 chrUextra 12064615 12065299 -16939357 - BATUMI_I LTR Pao -3907 4056 3376 9 677 3309 184 9 11 chrUextra 12065399 12066140 -16938516 - SAR_DM Satellite Satellite -487 985 246 9 677 4756 11 0 4 chrUextra 12066241 12066801 -16937855 + TART LINE telomeric 13920 14477 0 9 677 1564 11 0 0 chrUextra 12066801 12066983 -16937673 + TART LINE telomeric 14101 14282 -195 9 677 5555 34 12 13 chrUextra 12067086 12067825 -16936831 - G2_DM LINE Jockey -2332 770 142 9 677 3345 44 7 0 chrUextra 12067925 12068331 -16936325 + DIVER2_I LTR Pao 529 937 -3210 9 677 769 78 0 10 chrUextra 12068300 12068404 -16936252 + DIVER2_I LTR Pao 4045 4147 0 9 677 2352 11 0 0 chrUextra 12068404 12068667 -16935989 + DIVER2_LTR LTR Pao 1 263 -122 9 677 1110 29 0 0 chrUextra 12069370 12069508 -16935148 + (CAAGA)n Simple_repeat Simple_repeat 2 139 0 9 677 2780 6 0 3 chrUextra 12069609 12069929 -16934727 - FW_DM LINE Jockey -1191 3501 3183 9 677 3081 92 31 2 chrUextra 12069926 12070351 -16934305 + HMSBEAGLE_I LTR Gypsy 4936 5372 -1157 9 677 6476 20 0 0 chrUextra 12070451 12071193 -16933463 + R1_DM LINE R1 1939 2680 -2676 9 677 3224 187 20 22 chrUextra 12072136 12072877 -16931779 + SAR_DM Satellite Satellite 1 739 -217 9 677 792 37 0 115 chrUextra 12073317 12073439 -16931217 - Baggins1 LINE LOA 0 5453 5346 9 677 2050 223 99 37 chrUextra 12073828 12074556 -16930100 - Gypsy12_LTR LTR Gypsy -529 1807 1035 9 677 6327 9 40 0 chrUextra 12074661 12075403 -16929253 + DOC2_DM LINE Jockey 2637 3408 -1385 9 677 6407 1 3 3 chrUextra 12075503 12076245 -16928411 + ROO_I LTR Pao 2692 3433 -4823 9 677 435 165 23 12 chrUextra 12076399 12076485 -16928171 + NTS_DM Other Other 4 90 -150 9 677 28 48 0 0 chrUextra 12076760 12076802 -16927854 + AT_rich Low_complexity Low_complexity 1 42 0 9 677 3910 83 10 29 chrUextra 12077220 12077814 -16926842 - Gypsy12_I LTR Gypsy -4963 583 1 9 677 297 186 34 34 chrUextra 12077828 12077917 -16926739 - Gypsy12A_LTR LTR Gypsy -553 1727 1639 9 677 3009 189 17 14 chrUextra 12078032 12078769 -16925887 - SAR_DM Satellite Satellite -625 738 1 9 677 6529 1 0 0 chrUextra 12078871 12079613 -16925043 + DM176_I LTR Gypsy 4089 4830 -1590 9 677 2456 101 12 32 chrUextra 12079713 12080309 -16924347 - DMSAT6 Satellite Satellite -80 583 1 9 677 1210 7 0 7 chrUextra 12080314 12080455 -16924201 + FW_DM LINE Jockey 1524 1663 -3029 9 677 989 54 6 20 chrUextra 12080598 12081296 -16923360 - RSP Satellite Satellite 0 688 1 9 677 3565 176 8 9 chrUextra 12081396 12082137 -16922519 + SAR_DM Satellite Satellite 298 1037 -435 9 677 6708 1 0 0 chrUextra 12082237 12082978 -16921678 + R1_DM LINE R1 1352 2092 -3264 9 677 6686 4 0 1 chrUextra 12083078 12083819 -16920837 + R2_DM LINE R2 7 746 -2861 9 677 6465 27 0 0 chrUextra 12083919 12084660 -16919996 - DMCR1A LINE CR1 -3066 1404 664 9 677 198 0 0 0 chrUextra 12084852 12084874 -16919782 + (TA)n Simple_repeat Simple_repeat 1 22 0 9 677 3515 5 7 7 chrUextra 12084874 12085287 -16919369 + DM297_LTR LTR Gypsy 2 414 0 9 677 1720 19 0 9 chrUextra 12085287 12085501 -16919155 + DM297_I LTR Gypsy 1 212 -5955 9 677 3495 172 10 8 chrUextra 12085601 12086329 -16918327 + SAR_DM Satellite Satellite 348 1076 -396 9 677 6461 9 1 1 chrUextra 12086442 12087183 -16917473 + ACCORD2_I LTR Gypsy 5616 6356 -856 9 677 220 141 46 15 chrUextra 12087782 12087847 -16916809 + (TTA)n Simple_repeat Simple_repeat 2 68 0 9 677 514 220 7 14 chrUextra 12088124 12088267 -16916389 + XDMR_DM Unknown Unknown 219 360 0 9 677 3299 280 34 54 chrUextra 12088145 12089703 -16914953 - SAR_DM Satellite Satellite -313 1526 1 9 677 6280 12 1 1 chrUextra 12089807 12090547 -16914109 + QUASIMODO_I LTR Gypsy 586 1325 -4735 9 677 1243 146 101 16 chrUextra 12090647 12090904 -16913752 - MDG1_LTR LTR Gypsy -75 367 89 9 677 1587 16 0 12 chrUextra 12090906 12091158 -16913498 + (TTA)n Simple_repeat Simple_repeat 1 249 0 9 677 792 62 101 0 chrUextra 12091158 12091287 -16913369 - MDG1_I LTR Gypsy -1720 4876 4735 9 677 607 21 21 0 chrUextra 12091292 12091388 -16913268 - FW_DM LINE Jockey 0 4692 4595 9 677 1699 55 36 0 chrUextra 12091520 12091739 -16912917 + PROTOP DNA P 1 227 -4253 9 677 3050 40 0 8 chrUextra 12091726 12092109 -16912547 - PROTOP_A DNA P -76 1029 650 9 677 819 37 398 0 chrUextra 12092106 12092229 -16912427 - PROTOP DNA P -3069 1411 1240 9 677 1231 0 0 0 chrUextra 12092546 12092681 -16911975 + 5S_DM RNA RNA 1 135 0 9 677 1231 0 0 0 chrUextra 12092905 12093040 -16911616 + 5S_DM RNA RNA 1 135 0 9 677 6617 0 1 0 chrUextra 12093170 12093908 -16910748 + ROO_I LTR Pao 1082 1820 -6436 9 677 3240 186 16 26 chrUextra 12094013 12094752 -16909904 - SAR_DM Satellite Satellite -593 731 1 9 677 201 121 0 0 chrUextra 12094995 12095028 -16909628 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 677 6796 0 0 0 chrUextra 12095693 12096434 -16908222 - MAX_I LTR Pao -4112 3802 3062 9 677 3215 220 30 20 chrUextra 12096539 12098116 -16906540 + SAR_DM Satellite Satellite 1 1592 -396 9 677 6465 1 0 1 chrUextra 12098216 12098956 -16905700 + DM297_I LTR Gypsy 198 936 -5231 9 677 2026 174 14 7 chrUextra 12099057 12099782 -16904874 + SAR_DM Satellite Satellite 1 730 -558 9 677 4386 7 77 0 chrUextra 12099898 12100639 -16904017 - QUASIMODO_I LTR Gypsy -5204 856 59 9 677 273 57 0 0 chrUextra 12101445 12101480 -16903176 + (TAA)n Simple_repeat Simple_repeat 2 36 0 9 677 259 128 0 21 chrUextra 12101706 12101754 -16902902 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 677 259 128 0 21 chrUextra 12101980 12102028 -16902628 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 677 259 128 0 21 chrUextra 12102272 12102320 -16902336 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 677 3635 31 116 0 chrUextra 12103293 12103759 -16900897 - PROTOP DNA P -3069 1411 892 9 677 1610 51 0 4 chrUextra 12103747 12104003 -16900653 - PROTOP DNA P -3648 832 578 9 677 3410 176 9 11 chrUextra 12104107 12104844 -16899812 + SAR_DM Satellite Satellite 198 933 -539 9 677 359 200 0 12 chrUextra 12104947 12105033 -16899623 + XDMR_DM Unknown Unknown 267 351 -9 9 677 3173 177 11 22 chrUextra 12104957 12105685 -16898971 - SAR_DM Satellite Satellite -354 1118 399 9 677 274 29 0 0 chrUextra 12105785 12105819 -16898837 + QUASIMODO_LTR LTR Gypsy 574 607 -51 9 677 5189 65 17 7 chrUextra 12105826 12106523 -16898133 + QUASIMODO_I LTR Gypsy 30 733 -5327 9 677 185 0 0 39 chrUextra 12106626 12106652 -16898004 + (TTA)n Simple_repeat Simple_repeat 2 26 0 9 677 1144 144 64 5 chrUextra 12106703 12106906 -16897750 - DNAREP1_DM LINE Penelope -358 236 22 9 677 4547 106 12 6 chrUextra 12107468 12108145 -16896511 + HETA LINE telomeric 2507 3187 -2894 9 677 6607 1 0 3 chrUextra 12108308 12109049 -16895607 + R1_DM LINE R1 2552 3290 -2066 9 677 5481 28 2 0 chrUextra 12109149 12109789 -16894867 - R1_DM LINE R1 -1582 3774 3134 9 677 878 53 0 9 chrUextra 12109775 12109890 -16894766 - R1_DM LINE R1 -3063 2293 2180 9 677 1295 33 0 0 chrUextra 12109990 12110143 -16894513 + CIRCE LINE Composite 4828 4980 -1376 9 677 1698 35 4 26 chrUextra 12110500 12110731 -16893925 + CIRCE LINE Composite 4981 5206 -1150 9 677 1410 187 57 35 chrUextra 12111199 12111571 -16893085 + STALKER4_I LTR Gypsy 885 1264 -5266 9 677 6000 9 1 11 chrUextra 12111672 12112413 -16892243 + STALKER4_I LTR Gypsy 5301 6034 -496 9 677 2053 184 10 8 chrUextra 12113354 12114069 -16890587 + SAR_DM Satellite Satellite 1 715 -677 9 677 1200 120 10 15 chrUextra 12115036 12115239 -16889417 - Gypsy12_I LTR Gypsy -5122 424 223 9 677 1183 183 88 24 chrUextra 12115376 12115707 -16888949 - Gypsy12_LTR LTR Gypsy -827 1509 1158 9 677 459 232 145 73 chrUextra 12115879 12116237 -16888419 - TV1I LTR Gypsy -1146 4914 4666 9 677 1119 226 40 15 chrUextra 12116206 12116617 -16888039 - TV1I LTR Gypsy -1677 4383 3874 9 677 201 260 0 0 chrUextra 12116748 12116825 -16887831 + (TA)n Simple_repeat Simple_repeat 2 78 0 9 677 22 0 0 0 chrUextra 12116919 12116941 -16887715 + AT_rich Low_complexity Low_complexity 1 22 0 9 677 236 253 90 50 chrUextra 12117014 12117114 -16887542 + DNAREP1_DM LINE Penelope 489 592 -2 9 677 320 161 10 147 chrUextra 12117353 12117455 -16887201 - DNAREP1_DM LINE Penelope -6 588 501 9 677 3223 245 23 45 chrUextra 12117559 12118972 -16885684 + SAR_DM Satellite Satellite 1 1382 -354 9 677 570 186 0 0 chrUextra 12118996 12119114 -16885542 - ARS406_DM Unknown Unknown -235 118 1 9 677 563 203 0 7 chrUextra 12119114 12119134 -16885522 + SAR_DM Satellite Satellite 528 664 -808 9 677 706 148 30 61 chrUextra 12119601 12119766 -16884890 - Gypsy5_LTR LTR Gypsy -194 236 77 9 677 583 73 0 0 chrUextra 12119770 12119852 -16884804 - Jockey2 LINE Jockey -3346 82 1 9 677 6372 3 0 0 chrUextra 12120082 12120823 -16883833 + FW_DM LINE Jockey 1224 1964 -2728 9 677 6212 20 0 0 chrUextra 12120923 12121664 -16882992 + Gypsy4_I LTR Gypsy 3230 3970 -2318 9 677 6487 1 1 0 chrUextra 12121764 12122505 -16882151 - LSU-rRNA_Dme rRNA rRNA -155 3745 3004 9 677 1836 184 31 23 chrUextra 12122605 12123341 -16881315 + SAR_DM Satellite Satellite 1 741 -678 9 677 6039 32 0 0 chrUextra 12123446 12124187 -16880469 + DIVER_I LTR Pao 2977 3717 -1926 9 677 5960 24 16 0 chrUextra 12124287 12125028 -16879628 + DOC2_DM LINE Jockey 1004 1756 -3037 9 677 6153 9 38 0 chrUextra 12125128 12125869 -16878787 + DOC2_DM LINE Jockey 3867 4635 -158 9 677 3536 209 0 4 chrUextra 12125969 12126710 -16877946 + ROVER-I_DM LTR Gypsy 2260 2997 -3587 9 677 6214 8 4 0 chrUextra 12126810 12127551 -16877105 + Invader3_I LTR Gypsy 3830 4573 -315 9 677 6244 5 3 1 chrUextra 12127651 12128392 -16876264 - R1_DM LINE R1 -963 4393 3652 9 677 2141 147 36 17 chrUextra 12128493 12128963 -16875693 + SAR_DM Satellite Satellite 425 903 -569 9 677 936 108 0 6 chrUextra 12128970 12129129 -16875527 - ARS406_DM Unknown Unknown -195 158 1 9 677 933 217 4 8 chrUextra 12128978 12129233 -16875423 + SAR_DM Satellite Satellite 496 749 -723 9 677 34 24 0 0 chrUextra 12130391 12130432 -16874224 + AT_rich Low_complexity Low_complexity 1 41 0 9 677 1105 188 238 47 chrUextra 12130445 12130915 -16873741 - TART LINE telomeric -3988 10489 9930 9 677 5491 35 1 23 chrUextra 12131856 12132597 -16872059 - BATUMI_I LTR Pao -4483 3480 2756 9 677 3564 58 91 12 chrUextra 12132697 12133270 -16871386 + PROTOP_A DNA P 488 1105 0 9 677 726 0 10 10 chrUextra 12133548 12133651 -16871005 + IDEFIX_LTR LTR Gypsy 492 594 0 9 677 25 0 0 0 chrUextra 12133841 12133866 -16870790 + AT_rich Low_complexity Low_complexity 1 25 0 9 677 1452 5 25 15 chrUextra 12134379 12134577 -16870079 + NTS_DM Other Other 41 240 0 9 677 1301 6 0 18 chrUextra 12134577 12134742 -16869914 + NTS_DM Other Other 1 162 -78 9 677 458 119 35 12 chrUextra 12134852 12134937 -16869719 + NTS_DM Other Other 4 90 -150 9 677 648 0 0 0 chrUextra 12135228 12135300 -16869356 + (TTCTC)n Simple_repeat Simple_repeat 4 75 0 9 677 4715 24 10 0 chrUextra 12136902 12137487 -16867169 + NINJA_I LTR Pao 2631 3221 -2790 9 677 1394 0 0 0 chrUextra 12137482 12137643 -16867013 + NINJA_I LTR Pao 3439 3599 -2412 9 677 6292 8 1 5 chrUextra 12137745 12138484 -16866172 - MICROPIA_I LTR Gypsy -681 3795 3060 9 677 6170 12 0 5 chrUextra 12139431 12140166 -16864490 + MICROPIA_I LTR Gypsy 3219 3949 -527 9 677 1263 65 54 0 chrUextra 12140268 12140452 -16864204 - QUASIMODO_I LTR Gypsy -5837 223 30 9 677 2272 98 8 31 chrUextra 12140459 12140849 -16863807 - QUASIMODO_LTR LTR Gypsy -51 607 91 9 677 1476 93 85 238 chrUextra 12141948 12142569 -16862087 - MAX_I LTR Pao -6457 1457 932 9 677 242 219 12 88 chrUextra 12142569 12142649 -16862007 - MAX_I LTR Pao -6760 1154 1081 9 677 255 125 0 0 chrUextra 12142801 12142841 -16861815 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12142884 12142924 -16861732 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12142976 12143016 -16861640 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12143068 12143108 -16861548 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12143160 12143200 -16861456 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 29 28 0 0 chrUextra 12143205 12143241 -16861415 + AT_rich Low_complexity Low_complexity 1 36 0 9 677 1903 0 0 0 chrUextra 12143313 12143530 -16861126 - LSU-rRNA_Dme rRNA rRNA 0 3900 3684 9 677 3621 40 11 4 chrUextra 12143630 12144101 -16860555 + DMRT1B LINE R1 4710 5183 0 9 677 546 28 106 0 chrUextra 12144119 12144261 -16860395 + (CAGAC)n Simple_repeat Simple_repeat 1 157 0 9 677 728 41 10 0 chrUextra 12144273 12144371 -16860285 + DMRT1A LINE R1 1 99 -5084 9 677 5489 49 24 0 chrUextra 12144473 12145212 -16859444 - R1_DM LINE R1 -4247 1109 353 9 677 6199 0 0 0 chrUextra 12145312 12146053 -16858603 + DM176_I LTR Gypsy 4563 5303 -1117 9 677 1404 108 0 9 chrUextra 12146181 12146396 -16858260 - BS2 LINE Jockey -4259 462 250 9 677 360 274 20 0 chrUextra 12146407 12146509 -16858147 - GTWIN_I LTR Gypsy -4772 1649 1546 9 677 1624 159 24 0 chrUextra 12146598 12146894 -16857762 - GTWIN_I LTR Gypsy -5149 1272 970 9 677 911 78 193 0 chrUextra 12146994 12147160 -16857496 - TART LINE telomeric -10683 3794 3597 9 677 3580 75 147 3 chrUextra 12147148 12147735 -16856921 - TART LINE telomeric -6479 7998 7328 9 677 6340 7 0 0 chrUextra 12147835 12148576 -16856080 - DMRT1B LINE R1 -74 5109 4369 9 677 6184 11 0 0 chrUextra 12148676 12149417 -16855239 + MDG1_I LTR Gypsy 2491 3231 -3365 9 677 5566 44 5 11 chrUextra 12149517 12150258 -16854398 + BATUMI_I LTR Pao 1810 2546 -5417 9 677 3115 185 8 11 chrUextra 12150359 12151098 -16853558 - SAR_DM Satellite Satellite -464 1008 272 9 677 2533 178 60 35 chrUextra 12151201 12151935 -16852721 - TART LINE telomeric -4813 9664 8466 9 677 2934 192 6 17 chrUextra 12152040 12152781 -16851875 + SAR_DM Satellite Satellite 1 733 -353 9 677 37 39 0 0 chrUextra 12153148 12153199 -16851457 + AT_rich Low_complexity Low_complexity 1 51 0 9 677 22 35 0 0 chrUextra 12153300 12153329 -16851327 + AT_rich Low_complexity Low_complexity 1 29 0 9 677 21 57 0 0 chrUextra 12153526 12153561 -16851095 + AT_rich Low_complexity Low_complexity 1 35 0 9 677 499 0 0 0 chrUextra 12153561 12153622 -16851034 + ALUII_DM Unknown Unknown 1 61 -179 9 677 6151 7 0 0 chrUextra 12153722 12154463 -16850193 + Invader2_I LTR Gypsy 2348 3088 -1504 9 677 5787 28 50 0 chrUextra 12154563 12155304 -16849352 + FW_DM LINE Jockey 1163 1940 -2752 9 677 4894 97 4 1 chrUextra 12155404 12156145 -16848511 - S_DM DNA Tc1 -226 1510 768 9 677 2993 0 0 0 chrUextra 12157488 12157827 -16846829 - ROO_LTR LTR Pao 0 428 90 9 677 3342 170 9 11 chrUextra 12157930 12158668 -16845988 - SAR_DM Satellite Satellite -435 1037 301 9 677 4169 152 29 0 chrUextra 12158770 12159506 -16845150 + Gypsy5_I LTR Gypsy 2914 3670 -2839 9 677 1215 18 6 6 chrUextra 12159621 12159785 -16844871 - NTS_DM Other Other -39 201 38 9 677 870 9 0 27 chrUextra 12159785 12159897 -16844759 - NTS_DM Other Other -107 133 25 9 677 1252 18 0 6 chrUextra 12159949 12160114 -16844542 - NTS_DM Other Other -39 201 38 9 677 870 9 0 27 chrUextra 12160114 12160226 -16844430 - NTS_DM Other Other -107 133 25 9 677 429 28 14 14 chrUextra 12160278 12160350 -16844306 - NTS_DM Other Other -39 201 130 9 677 2706 40 34 0 chrUextra 12160528 12160878 -16843778 - Baggins1 LINE LOA -202 5251 4890 9 677 1260 72 25 10 chrUextra 12161291 12161487 -16843169 - CIRCE LINE Composite -1177 5179 4981 9 677 1292 84 5 0 chrUextra 12161841 12162032 -16842624 - CIRCE LINE Composite -1376 4980 4789 9 677 244 128 0 21 chrUextra 12162244 12162292 -16842364 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 677 244 128 0 21 chrUextra 12162522 12162570 -16842086 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 677 351 49 65 16 chrUextra 12162592 12162654 -16842002 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 677 697 193 0 7 chrUextra 12162653 12162799 -16841857 - DMLTR5 LTR Gypsy 0 266 122 9 677 6349 0 1 4 chrUextra 12163814 12164555 -16840101 - SSU-rRNA_Dme rRNA rRNA -473 1522 784 9 677 6447 1 1 1 chrUextra 12164655 12165396 -16839260 - SSU-rRNA_Dme rRNA rRNA -1057 938 198 9 677 6507 1 0 0 chrUextra 12165496 12166237 -16838419 - SSU-rRNA_Dme rRNA rRNA -1029 966 226 9 677 6774 4 3 0 chrUextra 12166337 12167078 -16837578 + DMRT1B LINE R1 1445 2187 -2996 9 677 1782 300 44 7 chrUextra 12167192 12167917 -16836739 - MICROPIA_I LTR Gypsy -1261 3215 2464 9 677 5306 92 22 0 chrUextra 12168021 12168759 -16835897 + DMRT1C LINE R1 2828 3581 -1862 9 677 2611 119 15 12 chrUextra 12168860 12169601 -16835055 - DMSAT6 Satellite Satellite -41 743 1 9 677 3256 177 16 13 chrUextra 12169705 12170416 -16834240 - SAR_DM Satellite Satellite -593 879 167 9 677 964 103 0 0 chrUextra 12170297 12170442 -16834214 + ARS406_DM Unknown Unknown 1 145 -208 9 677 1714 5 5 0 chrUextra 12170542 12170736 -16833920 - Copia2_LTR_DM LTR Copia -3 195 1 9 677 4922 11 0 0 chrUextra 12170736 12171283 -16833373 - Copia2_I LTR Copia 0 4162 3616 9 677 1526 54 9 33 chrUextra 12171383 12171595 -16833061 + BATUMI_LTR LTR Pao 66 272 0 9 677 2367 150 73 3 chrUextra 12171597 12172124 -16832532 + IDEFIX_I LTR Gypsy 1978 2658 -3402 9 677 6601 12 1 0 chrUextra 12172224 12172961 -16831695 - FW_DM LINE Jockey -1888 2804 2067 9 677 1607 288 54 4 chrUextra 12173066 12173806 -16830850 - Gypsy4_I LTR Gypsy -2719 3569 2735 9 677 6236 12 57 0 chrUextra 12173906 12174647 -16830009 + Gypsy4_I LTR Gypsy 4383 5165 -1123 9 677 5133 23 50 3 chrUextra 12174748 12175395 -16829261 - Invader2_I LTR Gypsy -3915 677 1 9 677 681 66 22 0 chrUextra 12175395 12175486 -16829170 - Invader2_LTR LTR Gypsy 0 266 174 9 677 4652 45 2 2 chrUextra 12175766 12176329 -16828327 - R1_DM LINE R1 -4037 1319 757 9 677 6572 16 0 1 chrUextra 12176429 12177170 -16827486 - FW_DM LINE Jockey -1047 3645 2906 9 677 3560 174 8 9 chrUextra 12177273 12178011 -16826645 + SAR_DM Satellite Satellite 282 1018 -454 9 677 6181 39 0 0 chrUextra 12178111 12178852 -16825804 + IDEFIX_I LTR Gypsy 960 1700 -3928 9 677 208 200 31 0 chrUextra 12178985 12179050 -16825606 + (TTA)n Simple_repeat Simple_repeat 2 68 0 9 677 21 36 0 0 chrUextra 12179373 12179401 -16825255 + AT_rich Low_complexity Low_complexity 1 28 0 9 677 58 15 0 0 chrUextra 12179575 12179640 -16825016 + AT_rich Low_complexity Low_complexity 1 65 0 9 677 920 94 14 0 chrUextra 12179793 12179931 -16824725 - SAR_DM Satellite Satellite -604 868 729 9 677 2934 173 7 9 chrUextra 12179949 12180532 -16824124 - SAR_DM Satellite Satellite -466 1006 425 9 677 5331 62 22 2 chrUextra 12180633 12181371 -16823285 - TART LINE telomeric -4898 9579 8863 9 677 5876 53 3 5 chrUextra 12181473 12182213 -16822443 + IDEFIX_I LTR Gypsy 2533 3270 -2358 9 677 775 11 0 21 chrUextra 12182314 12182407 -16822249 - NTS_DM Other Other -149 91 1 9 677 1540 15 20 20 chrUextra 12182407 12182610 -16822046 - NTS_DM Other Other 0 240 38 9 677 841 18 0 44 chrUextra 12182610 12182724 -16821932 - NTS_DM Other Other -107 133 25 9 677 1302 18 0 12 chrUextra 12182776 12182942 -16821714 - NTS_DM Other Other -39 201 38 9 677 921 9 0 27 chrUextra 12182942 12183053 -16821603 - NTS_DM Other Other -107 133 26 9 677 1324 14 0 0 chrUextra 12183153 12183298 -16821358 + R1_DM LINE R1 5212 5356 0 9 677 4439 61 12 4 chrUextra 12183331 12183893 -16820763 + R1_DM LINE R1 1 567 -4789 9 677 6035 35 0 0 chrUextra 12183993 12184733 -16819923 + MDG1_I LTR Gypsy 4744 5483 -1113 9 677 730 0 0 0 chrUextra 12184833 12184913 -16819743 - NTS_DM Other Other -123 117 38 9 677 928 9 0 27 chrUextra 12184913 12185025 -16819631 - NTS_DM Other Other -107 133 25 9 677 22 56 0 0 chrUextra 12185052 12185088 -16819568 + AT_rich Low_complexity Low_complexity 1 36 0 9 677 277 176 0 19 chrUextra 12185101 12185153 -16819503 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 266 196 0 19 chrUextra 12185184 12185236 -16819420 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 266 196 0 19 chrUextra 12185276 12185328 -16819328 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 266 196 0 19 chrUextra 12185368 12185420 -16819236 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 486 0 0 0 chrUextra 12185521 12185573 -16819083 - LSU-rRNA_Dme rRNA rRNA 0 3900 3849 9 677 6315 32 3 1 chrUextra 12185673 12186413 -16818243 - R1_DM LINE R1 -2408 2948 2208 9 677 6727 8 0 0 chrUextra 12186513 12187253 -16817403 - R1_DM LINE R1 -1570 3786 3047 9 677 6788 5 1 1 chrUextra 12187353 12188093 -16816563 + Gypsy6_I LTR Gypsy 4027 4766 -2246 9 677 664 42 0 30 chrUextra 12188815 12188914 -16815742 - ALUII_DM Unknown Unknown 0 240 145 9 677 23 0 0 0 chrUextra 12189289 12189312 -16815344 + AT_rich Low_complexity Low_complexity 1 23 0 9 678 5258 5 3 0 chrUextra 12189873 12190460 -16814196 - MAX_I LTR Pao -7325 589 1 9 678 1429 7 0 0 chrUextra 12190460 12190613 -16814043 - MAX_LTR LTR Pao 0 321 169 9 678 6624 3 0 12 chrUextra 12190713 12191453 -16813203 + DOC LINE Jockey 290 1020 -3705 9 678 5344 92 34 0 chrUextra 12191553 12192292 -16812364 + Invader1_I LTR Gypsy 2097 2860 -326 9 678 2982 254 14 5 chrUextra 12192397 12193133 -16811523 + Gypsy6_I LTR Gypsy 2349 3090 -3922 9 678 736 98 9 0 chrUextra 12193233 12193345 -16811311 - ARS406_DM Unknown Unknown -240 113 1 9 678 3347 179 8 11 chrUextra 12193252 12193973 -16810683 + SAR_DM Satellite Satellite 195 913 -559 9 678 405 189 30 40 chrUextra 12195552 12195651 -16809005 + Gypsy_LTR LTR Gypsy 1 98 -384 9 678 1658 332 9 20 chrUextra 12195753 12196490 -16808166 - MICROPIA_I LTR Gypsy -583 3893 3165 9 678 2575 0 0 0 chrUextra 12197060 12197333 -16807323 - ROO_LTR LTR Pao 0 428 156 9 678 6207 14 5 1 chrUextra 12197433 12198173 -16806483 + PROTOP DNA P 3409 4151 -329 9 678 6324 11 42 1 chrUextra 12198273 12199013 -16805643 + R1_DM LINE R1 462 1231 -4125 9 678 5390 2 0 0 chrUextra 12199113 12199690 -16804966 - LSU-rRNA_Dme rRNA rRNA -684 3216 2640 9 678 1554 0 0 0 chrUextra 12199688 12199853 -16804803 - R1_DM LINE R1 0 5356 5192 9 678 2775 158 17 12 chrUextra 12199953 12200482 -16804174 - SAR_DM Satellite Satellite -550 741 67 9 678 1082 94 0 0 chrUextra 12200482 12200641 -16804015 + ARS406_DM Unknown Unknown 31 189 -164 9 678 2775 158 17 12 chrUextra 12200641 12200691 -16803965 - SAR_DM Satellite Satellite -550 66 1 9 678 6819 3 0 1 chrUextra 12200793 12201533 -16803123 - DOC LINE Jockey -238 4487 3749 9 678 6753 7 0 0 chrUextra 12201633 12202373 -16802283 + R1_DM LINE R1 2219 2958 -2398 9 678 6403 23 0 9 chrUextra 12202476 12203213 -16801443 + R1_DM LINE R1 1590 2319 -3037 9 678 5676 43 16 19 chrUextra 12203313 12204053 -16800603 - NOMAD_I LTR Gypsy -270 6302 5565 9 678 6454 28 1 0 chrUextra 12204153 12204893 -16799763 - R1_DM LINE R1 -149 5207 4467 9 678 4291 0 0 2 chrUextra 12204993 12205455 -16799201 - DOC LINE Jockey -4248 477 17 9 678 5699 0 0 37 chrUextra 12205833 12206504 -16798152 - LSU-rRNA_Dme rRNA rRNA -3254 646 1 9 678 360 48 0 0 chrUextra 12206673 12206715 -16797941 - R1_DM LINE R1 -72 5284 5243 9 678 6078 29 1 1 chrUextra 12206712 12207413 -16797243 - R1_DM LINE R1 -290 5066 4366 9 678 6523 22 8 0 chrUextra 12207513 12208253 -16796403 + R1_DM LINE R1 1610 2355 -3001 9 678 6508 19 3 1 chrUextra 12208353 12209093 -16795563 + R1_DM LINE R1 3769 4509 -847 9 678 6273 30 0 8 chrUextra 12210873 12211613 -16793043 + STALKER4_I LTR Gypsy 4140 4873 -1657 9 678 858 0 11 0 chrUextra 12211713 12211808 -16792848 + LSU-rRNA_Dme rRNA rRNA 3805 3900 0 9 678 25 0 0 0 chrUextra 12211880 12211905 -16792751 + AT_rich Low_complexity Low_complexity 1 25 0 9 678 241 163 0 58 chrUextra 12211907 12211959 -16792697 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 678 241 163 0 58 chrUextra 12212007 12212059 -16792597 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 678 25 0 0 0 chrUextra 12212078 12212103 -16792553 + AT_rich Low_complexity Low_complexity 1 25 0 9 678 266 196 0 19 chrUextra 12212105 12212157 -16792499 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 678 255 196 0 19 chrUextra 12212197 12212249 -16792407 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 678 266 196 0 19 chrUextra 12212289 12212341 -16792315 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 678 276 154 273 15 chrUextra 12212372 12212438 -16792218 + LSU-rRNA_Dme rRNA rRNA 2570 2652 -1248 9 678 4317 4 0 0 chrUextra 12212553 12213023 -16791633 + LSU-rRNA_Dme rRNA rRNA 2113 2582 -1318 9 678 2466 4 0 0 chrUextra 12213026 12213293 -16791363 + R2_DM LINE R2 2081 2347 -1260 9 678 6576 4 3 0 chrUextra 12213393 12214133 -16790523 + DM297_I LTR Gypsy 4697 5438 -729 9 678 487 108 26 13 chrUextra 12214233 12214381 -16790275 - RSP Satellite Satellite -64 149 1 9 678 6452 19 11 5 chrUextra 12215074 12215813 -16788843 - Gypsy2_I LTR Gypsy -3381 2754 2012 9 678 993 122 0 0 chrUextra 12215913 12216060 -16788596 + TART LINE telomeric 3723 3869 -10608 9 678 3758 108 3 36 chrUextra 12216069 12216653 -16788003 + TART LINE telomeric 5332 5896 -8581 9 678 2510 7 0 3 chrUextra 12216753 12217053 -16787603 + DOC LINE Jockey 4427 4725 0 9 678 596 329 16 16 chrUextra 12217054 12217440 -16787216 + HMSBEAGLE_I LTR Gypsy 5000 5385 -1144 9 678 435 90 0 29 chrUextra 12217593 12217662 -16786994 + BATUMI_I LTR Pao 6685 6751 -1212 9 678 4645 35 2 12 chrUextra 12217655 12218227 -16786429 - BATUMI_I LTR Pao -4489 3474 2909 9 678 932 9 9 9 chrUextra 12218225 12218333 -16786323 - BATUMI_I LTR Pao -5715 2248 2141 9 678 3409 184 9 11 chrUextra 12218433 12219173 -16785483 + SAR_DM Satellite Satellite 268 1006 -466 9 678 22 35 0 0 chrUextra 12219273 12219302 -16785354 + AT_rich Low_complexity Low_complexity 1 29 0 9 678 802 186 23 125 chrUextra 12219360 12219624 -16785032 - Gypsy3_LTR LTR Gypsy -161 237 1 9 678 1650 214 1 1 chrUextra 12219627 12219961 -16784695 - Gypsy3_I LTR Gypsy -21 6156 5821 9 678 6607 16 1 0 chrUextra 12220113 12220853 -16783803 - DIVER_I LTR Pao -1061 4582 3842 9 678 3244 181 11 17 chrUextra 12220953 12221668 -16782988 - SAR_DM Satellite Satellite -571 901 191 9 678 636 180 0 8 chrUextra 12221570 12221693 -16782963 + ARS406_DM Unknown Unknown 1 122 -231 9 678 1332 18 0 6 chrUextra 12221840 12222005 -16782651 - NTS_DM Other Other -39 201 38 9 678 928 9 0 27 chrUextra 12222005 12222117 -16782539 - NTS_DM Other Other -107 133 25 9 678 22 56 0 0 chrUextra 12222143 12222179 -16782477 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 277 176 0 19 chrUextra 12222192 12222244 -16782412 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 678 266 196 0 19 chrUextra 12222275 12222327 -16782329 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 678 262 150 0 0 chrUextra 12222367 12222407 -16782249 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 27 29 0 0 chrUextra 12222412 12222446 -16782210 + AT_rich Low_complexity Low_complexity 1 34 0 9 678 232 143 0 0 chrUextra 12222655 12222690 -16781966 + HETRP_DM Satellite Satellite 1600 1634 -238 9 678 838 171 12 19 chrUextra 12222738 12222899 -16781757 + HETRP_DM Satellite Satellite 1516 1675 -197 9 678 238 208 0 19 chrUextra 12222951 12223005 -16781651 + HETRP_DM Satellite Satellite 1580 1632 -240 9 678 328 174 250 42 chrUextra 12223052 12223148 -16781508 + HETRP_DM Satellite Satellite 1519 1634 -238 9 678 838 171 12 19 chrUextra 12223196 12223357 -16781299 + HETRP_DM Satellite Satellite 1516 1675 -197 9 678 2299 118 11 48 chrUextra 12223477 12224193 -16780463 - DMSAT6 Satellite Satellite -37 690 1 9 678 21 57 0 0 chrUextra 12224535 12224570 -16780086 + AT_rich Low_complexity Low_complexity 1 35 0 9 678 827 10 0 0 chrUextra 12225153 12225249 -16779407 - Copia_I LTR Copia -4497 96 1 9 678 2377 4 0 0 chrUextra 12225249 12225525 -16779131 - Copia_LTR LTR Copia 0 276 1 9 678 2498 75 133 18 chrUextra 12225525 12225893 -16778763 + TART LINE telomeric 7300 7711 -6766 9 678 2067 8 0 0 chrUextra 12226099 12226339 -16778317 - ALUII_DM Unknown Unknown 0 240 1 9 678 21 57 0 0 chrUextra 12226339 12226374 -16778282 + AT_rich Low_complexity Low_complexity 1 35 0 9 678 22 35 0 0 chrUextra 12226571 12226600 -16778056 + AT_rich Low_complexity Low_complexity 1 29 0 9 678 25 31 0 0 chrUextra 12226701 12226733 -16777923 + AT_rich Low_complexity Low_complexity 1 32 0 9 678 2904 210 16 15 chrUextra 12226834 12227573 -16777083 - SAR_DM Satellite Satellite -677 739 1 9 678 6759 3 1 0 chrUextra 12227673 12228413 -16776243 + Copia2_I LTR Copia 3060 3800 -362 9 678 6507 3 0 0 chrUextra 12228513 12229253 -16775403 - ROVER-I_DM LTR Gypsy -1836 4748 4009 9 678 1621 236 45 54 chrUextra 12229357 12230093 -16774563 + SAR_DM Satellite Satellite 1 729 -396 9 678 2381 207 28 55 chrUextra 12230193 12230933 -16773723 + TAHRE LINE telomeric 7185 7904 -2559 9 678 1906 23 0 0 chrUextra 12231033 12231253 -16773403 - BATUMI_I LTR Pao -7743 220 1 9 678 1871 53 37 26 chrUextra 12231253 12231522 -16773134 - BATUMI_LTR LTR Pao 0 272 1 9 678 1510 47 42 5 chrUextra 12232715 12232928 -16771728 + TART_B1 LINE telomeric 3418 3638 -7016 9 678 3765 103 0 2 chrUextra 12232928 12233452 -16771204 + TART_B1 LINE telomeric 4264 4786 -5868 9 678 700 167 0 14 chrUextra 12233553 12233693 -16770963 - ARS406_DM Unknown Unknown -215 138 1 9 678 2964 182 17 24 chrUextra 12233584 12234293 -16770363 + SAR_DM Satellite Satellite 180 883 -589 9 678 6134 4 3 0 chrUextra 12234393 12235076 -16769580 - R1_DM LINE R1 -4671 685 1 9 678 254 30 30 0 chrUextra 12235076 12235109 -16769547 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 9 678 255 0 0 0 chrUextra 12235104 12235133 -16769523 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2625 9 678 25 48 0 46 chrUextra 12235471 12235536 -16769120 + AT_rich Low_complexity Low_complexity 1 62 0 9 678 1041 310 75 19 chrUextra 12236080 12236653 -16768003 - Invader3_I LTR Gypsy -915 3973 3369 9 678 233 256 11 55 chrUextra 12236648 12236739 -16767917 - PROTOP_B DNA P -605 548 462 9 678 5715 23 1 0 chrUextra 12236913 12237573 -16767083 - R1_DM LINE R1 -3018 2338 1678 9 678 652 24 0 0 chrUextra 12237570 12237653 -16767003 - R1_DM LINE R1 -4389 967 885 9 678 1121 15 0 62 chrUextra 12237784 12237928 -16766728 + 5S_DM RNA RNA 1 135 0 9 678 1231 0 0 0 chrUextra 12238152 12238287 -16766369 + 5S_DM RNA RNA 1 135 0 9 678 6273 22 27 0 chrUextra 12238593 12239333 -16765323 - FW_DM LINE Jockey -685 4007 3248 9 678 5973 46 4 1 chrUextra 12239433 12240173 -16764483 - Stalker2_I LTR Gypsy -2866 4536 3795 9 678 3873 0 23 2 chrUextra 12240273 12240715 -16763941 - G_DM LINE Jockey -3895 451 1 9 678 242 103 25 25 chrUextra 12240788 12240828 -16763828 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 237 175 0 0 chrUextra 12240880 12240920 -16763736 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 251 186 0 0 chrUextra 12240969 12241012 -16763644 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 9 678 3531 164 11 12 chrUextra 12241113 12241853 -16762803 - SAR_DM Satellite Satellite -435 1037 299 9 678 3317 174 14 26 chrUextra 12241953 12242686 -16761970 + SAR_DM Satellite Satellite 380 1103 -369 9 678 230 111 0 62 chrUextra 12242645 12242693 -16761963 - XDMR Unknown Unknown 0 361 317 9 678 6594 9 8 0 chrUextra 12242793 12243533 -16761123 + Gypsy4_I LTR Gypsy 545 1290 -4998 9 678 6676 7 0 0 chrUextra 12243633 12244373 -16760283 - DIVER_I LTR Pao -1778 3865 3126 9 678 6410 3 7 0 chrUextra 12244473 12245213 -16759443 + BLOOD_I LTR Gypsy 2592 3336 -3277 9 678 954 0 0 0 chrUextra 12245313 12245423 -16759233 - Copia_I LTR Copia -4483 110 1 9 678 2377 4 0 0 chrUextra 12245423 12245699 -16758957 - Copia_LTR LTR Copia 0 276 1 9 678 3127 3 0 0 chrUextra 12245707 12246053 -16758603 + MDG3_I LTR Gypsy 807 1152 -3834 9 678 6689 4 1 0 chrUextra 12246153 12246893 -16757763 - DM1731_I LTR Copia -725 3251 2511 9 678 3046 182 18 26 chrUextra 12247001 12247733 -16756923 - SAR_DM Satellite Satellite -300 1172 447 9 678 6586 1 1 4 chrUextra 12247835 12248573 -16756083 + LSU-rRNA_Dme rRNA rRNA 773 1508 -2392 9 678 273 98 0 0 chrUextra 12249205 12249246 -16755410 + (TC)n Simple_repeat Simple_repeat 1 41 0 9 678 6159 30 3 1 chrUextra 12249513 12250253 -16754403 - R1_DM LINE R1 -1409 3947 3207 9 678 6609 3 18 0 chrUextra 12250353 12251093 -16753563 + MDG3_I LTR Gypsy 200 952 -4034 9 678 723 116 0 8 chrUextra 12251193 12251315 -16753341 - ARS406_DM Unknown Unknown -232 121 1 9 678 3226 176 17 8 chrUextra 12251221 12251924 -16752732 + SAR_DM Satellite Satellite 195 903 -569 9 678 6754 3 1 0 chrUextra 12252033 12252773 -16751883 + SSU-rRNA_Dme rRNA rRNA 173 913 -1082 9 678 3617 171 6 6 chrUextra 12252878 12253600 -16751056 - SAR_DM Satellite Satellite -425 1047 326 9 678 2269 0 4 0 chrUextra 12253713 12253962 -16750694 + SSU-rRNA_Dme rRNA rRNA 1746 1995 0 9 678 21 89 0 0 chrUextra 12253981 12254037 -16750619 + AT_rich Low_complexity Low_complexity 1 56 0 9 678 6157 9 3 0 chrUextra 12254556 12255293 -16749363 + IDEFIX_I LTR Gypsy 3686 4424 -1204 9 678 6182 3 0 4 chrUextra 12255393 12256081 -16748575 + LSU-rRNA_Dme rRNA rRNA 1979 2663 -1237 9 678 291 0 0 0 chrUextra 12256099 12256133 -16748523 + R1_DM LINE R1 1 34 -5322 9 678 607 283 45 24 chrUextra 12256628 12256971 -16747685 - Invader1_I LTR Gypsy -617 2569 2310 9 678 1399 16 134 0 chrUextra 12257073 12257267 -16747389 - PROTOP_B DNA P -463 690 471 9 678 3310 57 117 0 chrUextra 12257266 12257813 -16746843 - PROTOP_B DNA P -404 749 158 9 678 5383 0 0 2 chrUextra 12257913 12258529 -16746127 - ROO_I LTR Pao -2905 5351 4737 9 678 1056 0 0 0 chrUextra 12258529 12258653 -16746003 - ROO_I LTR Pao -4126 4130 4007 9 678 820 0 0 0 chrUextra 12258753 12258845 -16745811 - NTS_DM Other Other -111 129 38 9 678 907 9 0 27 chrUextra 12258845 12258957 -16745699 - NTS_DM Other Other -107 133 25 9 678 22 56 0 0 chrUextra 12258983 12259019 -16745637 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 269 125 0 0 chrUextra 12259032 12259072 -16745584 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 262 150 0 0 chrUextra 12259115 12259155 -16745501 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 231 140 233 50 chrUextra 12259194 12259254 -16745402 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2581 9 678 262 150 0 0 chrUextra 12259306 12259346 -16745310 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 27 29 0 0 chrUextra 12259351 12259385 -16745271 + AT_rich Low_complexity Low_complexity 1 34 0 9 678 231 105 0 50 chrUextra 12259404 12259444 -16745212 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2581 9 678 22 56 0 0 chrUextra 12259449 12259485 -16745171 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 6518 0 0 4 chrUextra 12259593 12260333 -16744323 + LSU-rRNA_Dme rRNA rRNA 462 1198 -2702 9 678 6720 4 0 0 chrUextra 12260433 12261173 -16743483 - DMRT1B LINE R1 -1164 4019 3280 9 678 263 106 21 0 chrUextra 12261273 12261320 -16743336 - ARS406_DM Unknown Unknown -305 48 1 9 678 3307 178 11 12 chrUextra 12261281 12262010 -16742646 + SAR_DM Satellite Satellite 246 973 -499 9 678 6026 1 0 36 chrUextra 12262113 12262843 -16741813 - LSU-rRNA_Dme rRNA rRNA -3196 704 1 9 678 32 0 0 0 chrUextra 12263027 12263059 -16741597 + AT_rich Low_complexity Low_complexity 1 32 0 9 678 4481 6 0 4 chrUextra 12263191 12263693 -16740963 + SSU-rRNA_Dme rRNA rRNA 1 500 -1495 9 678 1964 173 220 45 chrUextra 12263793 12264460 -16740196 + TART LINE telomeric 9696 10479 -3998 9 678 34 24 0 0 chrUextra 12264479 12264520 -16740136 + AT_rich Low_complexity Low_complexity 1 41 0 9 678 1971 182 5 7 chrUextra 12264633 12265372 -16739284 + SAR_DM Satellite Satellite 1 737 -558 9 678 3155 187 17 21 chrUextra 12265474 12266211 -16738445 + SAR_DM Satellite Satellite 1 734 -207 9 678 6599 1 4 3 chrUextra 12266311 12267048 -16737608 - SSU-rRNA_Dme rRNA rRNA -703 1292 555 9 678 259 128 0 21 chrUextra 12267455 12267503 -16737153 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 678 241 149 0 21 chrUextra 12267748 12267796 -16736860 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 678 684 13 0 0 chrUextra 12267989 12268065 -16736591 - NTS_DM Other Other -164 76 1 9 678 1835 17 17 17 chrUextra 12268065 12268305 -16736351 - NTS_DM Other Other 0 240 1 9 678 1835 17 17 17 chrUextra 12268305 12268545 -16736111 - NTS_DM Other Other 0 240 1 9 678 1228 28 22 22 chrUextra 12268545 12268728 -16735928 - NTS_DM Other Other 0 240 58 9 678 809 11 0 0 chrUextra 12268828 12268918 -16735738 - NTS_DM Other Other -150 90 1 9 678 1764 25 17 21 chrUextra 12268918 12269159 -16735497 - NTS_DM Other Other 0 240 1 9 678 1835 17 17 17 chrUextra 12269159 12269399 -16735257 - NTS_DM Other Other 0 240 1 9 678 1059 31 30 24 chrUextra 12269399 12269565 -16735091 - NTS_DM Other Other 0 240 74 9 678 2364 168 123 20 chrUextra 12269697 12270288 -16734368 - HETA LINE telomeric -564 5517 4866 9 678 543 90 8 160 chrUextra 12270287 12270406 -16734250 - TAHRE LINE telomeric -3269 7194 7094 9 678 3619 164 9 11 chrUextra 12270506 12271245 -16733411 + SAR_DM Satellite Satellite 296 1033 -439 9 678 1840 176 50 19 chrUextra 12272184 12272923 -16731733 - SAR_DM Satellite Satellite -673 762 1 9 678 6686 0 0 0 chrUextra 12273024 12273762 -16730894 + FW_DM LINE Jockey 2951 3688 -1004 9 678 6071 45 1 3 chrUextra 12274701 12275440 -16729216 - R1_DM LINE R1 -3555 1801 1064 9 678 6576 1 0 0 chrUextra 12275540 12276279 -16728377 + ROO_I LTR Pao 5450 6188 -2068 9 678 6586 8 0 0 chrUextra 12276379 12277118 -16727538 - IDEFIX_I LTR Gypsy -3485 2143 1405 9 678 2964 185 31 16 chrUextra 12277219 12277928 -16726728 - SAR_DM Satellite Satellite -558 914 195 9 678 689 139 0 8 chrUextra 12277834 12277957 -16726699 + ARS406_DM Unknown Unknown 1 122 -231 9 678 3222 174 19 24 chrUextra 12278058 12278796 -16725860 - SAR_DM Satellite Satellite -493 979 246 9 678 28 48 0 0 chrUextra 12279554 12279596 -16725060 + AT_rich Low_complexity Low_complexity 1 42 0 9 678 2637 60 11 3 chrUextra 12279735 12280084 -16724572 - IDEFIX_I LTR Gypsy -4732 896 545 9 678 1949 28 49 0 chrUextra 12280096 12280343 -16724313 - IDEFIX_I LTR Gypsy -5369 259 1 9 678 5869 27 15 5 chrUextra 12280574 12281313 -16723343 + PROTOP_A DNA P 279 1024 -81 9 678 6142 1 0 34 chrUextra 12281413 12282152 -16722504 + LSU-rRNA_Dme rRNA rRNA 129 842 -3058 9 678 6464 9 0 0 chrUextra 12282252 12282991 -16721665 - Invader3_I LTR Gypsy -2401 2487 1749 9 678 6163 12 5 1 chrUextra 12283091 12283830 -16720826 - PROTOP DNA P -539 3941 3200 9 678 2063 4 0 4 chrUextra 12283930 12284168 -16720488 - FW_DM LINE Jockey -486 4206 3970 9 678 4419 4 0 0 chrUextra 12284176 12284669 -16719987 - FW_DM LINE Jockey -976 3716 3224 9 678 2097 207 28 57 chrUextra 12284770 12285314 -16719342 - Gypsy12_LTR LTR Gypsy -1796 540 13 9 678 1346 83 0 11 chrUextra 12285326 12285508 -16719148 - Gypsy12_I LTR Gypsy 0 5546 5367 9 678 356 200 10 20 chrUextra 12285608 12285710 -16718946 + XDMR_DM Unknown Unknown 260 360 0 9 678 3216 178 8 21 chrUextra 12285624 12286343 -16718313 - SAR_DM Satellite Satellite -354 1118 409 9 678 21 36 0 0 chrUextra 12286451 12286479 -16718177 + AT_rich Low_complexity Low_complexity 1 28 0 9 678 21 57 0 0 chrUextra 12286676 12286711 -16717945 + AT_rich Low_complexity Low_complexity 1 35 0 9 678 2058 8 0 0 chrUextra 12286711 12286951 -16717705 + ALUII_DM Unknown Unknown 1 240 0 9 678 3209 172 20 23 chrUextra 12287287 12288024 -16716632 - SAR_DM Satellite Satellite -313 1159 425 9 678 6284 19 22 0 chrUextra 12288132 12288864 -16715792 - R1_DM LINE R1 -2940 2416 1669 9 678 288 176 0 0 chrUextra 12288968 12289036 -16715620 + (CATAA)n Simple_repeat Simple_repeat 2 69 0 9 678 2134 206 68 52 chrUextra 12289846 12290542 -16714114 + Gypsy12_LTR LTR Gypsy 831 1537 -799 9 678 457 169 0 12 chrUextra 12290642 12290726 -16713930 - HETRP_DM Satellite Satellite -261 1611 1529 9 678 697 181 18 61 chrUextra 12290884 12291049 -16713607 - HETRP_DM Satellite Satellite -197 1675 1518 9 678 680 193 7 14 chrUextra 12291166 12291308 -16713348 - HETRP_DM Satellite Satellite -203 1669 1529 9 678 895 300 35 42 chrUextra 12291482 12291913 -16712743 - FROGGER_I LTR Copia -1243 834 407 9 678 6545 12 0 0 chrUextra 12292322 12293059 -16711597 + Gypsy4_I LTR Gypsy 1103 1839 -4449 9 678 1951 179 65 97 chrUextra 12293169 12293898 -16710758 - HETA LINE telomeric -5184 897 193 9 678 2173 178 55 29 chrUextra 12293998 12294512 -16710144 - Stalker2_I LTR Gypsy -6585 817 291 9 678 28 48 0 0 chrUextra 12294519 12294561 -16710095 + AT_rich Low_complexity Low_complexity 1 42 0 9 678 266 172 0 33 chrUextra 12294649 12294709 -16709947 - Stalker3_LTR LTR Gypsy 0 372 315 9 678 2982 0 0 0 chrUextra 12294837 12295175 -16709481 + FW_DM LINE Jockey 4355 4692 0 9 678 405 180 17 35 chrUextra 12295174 12295289 -16709367 - Gypsy2_I LTR Gypsy -5530 605 493 9 678 453 170 69 10 chrUextra 12295436 12295537 -16709119 - Gypsy2_LTR LTR Gypsy -147 206 100 9 678 37 39 0 0 chrUextra 12295762 12295813 -16708843 + AT_rich Low_complexity Low_complexity 1 51 0 9 678 22 35 0 0 chrUextra 12295914 12295943 -16708713 + AT_rich Low_complexity Low_complexity 1 29 0 9 678 254 192 41 0 chrUextra 12296140 12296213 -16708443 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 9 678 3198 184 15 20 chrUextra 12296515 12297252 -16707404 - SAR_DM Satellite Satellite -468 1004 272 9 678 6138 23 0 0 chrUextra 12297354 12298093 -16706563 - ZAM_I LTR Gypsy -1473 6017 5279 9 678 566 146 73 51 chrUextra 12298193 12298330 -16706326 + TART LINE telomeric 7224 7363 -7114 9 678 2523 116 16 7 chrUextra 12298327 12298724 -16705932 + TART LINE telomeric 7403 7726 -6751 9 678 716 83 46 0 chrUextra 12298723 12298832 -16705824 + TART LINE telomeric 10224 10337 -4140 9 678 676 67 10 0 chrUextra 12298828 12298932 -16705724 + TAHRE LINE telomeric 10186 10290 -173 9 678 220 141 46 15 chrUextra 12299325 12299390 -16705266 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 678 21 89 0 0 chrUextra 12300119 12300175 -16704481 + AT_rich Low_complexity Low_complexity 1 56 0 9 678 3761 2 2 2 chrUextra 12300194 12300610 -16704046 - SSU-rRNA_Dme rRNA rRNA 0 1995 1580 9 678 21 0 0 0 chrUextra 12301791 12301812 -16702844 + AT_rich Low_complexity Low_complexity 1 21 0 9 678 1790 171 12 0 chrUextra 12302388 12302734 -16701922 - SAR_DM Satellite Satellite -587 885 536 9 678 2269 74 33 21 chrUextra 12302737 12303127 -16701529 + Gypsy6A_LTR LTR Gypsy 1 394 -26 9 678 26 30 0 0 chrUextra 12303781 12303814 -16700842 + AT_rich Low_complexity Low_complexity 1 33 0 9 678 1566 11 0 0 chrUextra 12304080 12304351 -16700305 + (GAGAA)n Simple_repeat Simple_repeat 1 271 0 9 678 6598 5 0 1 chrUextra 12304905 12305644 -16699012 + DMRT1B LINE R1 1942 2679 -2504 9 678 6252 9 1 0 chrUextra 12305745 12306483 -16698173 + STALKER4_I LTR Gypsy 2728 3466 -3064 9 678 6177 20 1 1 chrUextra 12306583 12307322 -16697334 + STALKER4_I LTR Gypsy 2234 2972 -3558 9 678 647 110 18 0 chrUextra 12307424 12307533 -16697123 - ARS406_DM Unknown Unknown -242 111 1 9 678 3034 184 18 14 chrUextra 12307443 12308161 -16696495 + SAR_DM Satellite Satellite 198 918 -554 9 678 909 61 9 0 chrUextra 12308261 12308376 -16696280 + R2_DM LINE R2 3470 3585 -22 9 678 191 32 65 0 chrUextra 12308376 12308407 -16696249 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 9 678 5153 12 0 7 chrUextra 12308407 12309000 -16695656 + LSU-rRNA_Dme rRNA rRNA 2584 3172 -728 9 678 393 316 19 25 chrUextra 12309110 12309269 -16695387 + Gypsy6_I LTR Gypsy 6854 7011 -1 9 678 1863 104 16 57 chrUextra 12309272 12309587 -16695069 + Gypsy6A_LTR LTR Gypsy 1 302 -118 9 678 1634 15 0 0 chrUextra 12309638 12309839 -16694817 + STALKER4_I LTR Gypsy 3181 3381 -3149 9 678 3239 193 8 14 chrUextra 12309939 12310678 -16693978 + SAR_DM Satellite Satellite 272 1006 -466 9 678 5065 26 5 2 chrUextra 12310778 12311382 -16693274 - DOC3_DM LINE Jockey -1130 3610 3005 9 678 1131 29 15 0 chrUextra 12311381 12311517 -16693139 - DOC3_DM LINE Jockey -1886 2854 2717 9 678 6554 5 0 1 chrUextra 12311619 12312356 -16692300 + IDEFIX_I LTR Gypsy 1625 2360 -3268 9 678 6095 24 4 1 chrUextra 12312456 12313195 -16691461 - ACCORD2_I LTR Gypsy -594 6618 5878 9 678 1278 0 0 0 chrUextra 12313296 12313436 -16691220 + LSU-rRNA_Dme rRNA rRNA 3761 3900 0 9 678 29 28 0 0 chrUextra 12313508 12313544 -16691112 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 262 150 0 0 chrUextra 12313549 12313589 -16691067 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 262 150 0 0 chrUextra 12313641 12313681 -16690975 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 262 150 0 0 chrUextra 12313733 12313773 -16690883 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 262 150 0 0 chrUextra 12313825 12313865 -16690791 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 269 125 0 0 chrUextra 12313908 12313948 -16690708 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 22 56 0 0 chrUextra 12313961 12313997 -16690659 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 4610 0 0 0 chrUextra 12314134 12314676 -16689980 + I_DM LINE I 4934 5475 -756 9 678 1580 0 0 6 chrUextra 12314690 12314871 -16689785 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 9 678 453 179 0 69 chrUextra 12314973 12315075 -16689581 - HETRP_DM Satellite Satellite -260 1612 1518 9 678 720 186 14 7 chrUextra 12315186 12315332 -16689324 - HETRP_DM Satellite Satellite -197 1675 1529 9 678 518 216 16 16 chrUextra 12315460 12315587 -16689069 - HETRP_DM Satellite Satellite -197 1675 1549 9 678 192 40 0 0 chrUextra 12315587 12315612 -16689044 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 678 328 174 250 42 chrUextra 12315834 12315930 -16688726 - HETRP_DM Satellite Satellite -238 1634 1519 9 678 238 208 0 19 chrUextra 12315977 12316031 -16688625 - HETRP_DM Satellite Satellite -240 1632 1580 9 678 838 171 12 19 chrUextra 12316083 12316244 -16688412 - HETRP_DM Satellite Satellite -197 1675 1516 9 678 328 174 250 42 chrUextra 12316292 12316388 -16688268 - HETRP_DM Satellite Satellite -238 1634 1519 9 678 238 208 0 19 chrUextra 12316435 12316489 -16688167 - HETRP_DM Satellite Satellite -240 1632 1580 9 678 2829 0 3 0 chrUextra 12316651 12316993 -16687663 - ROO_I LTR Pao -170 8086 7744 9 678 3396 2 2 0 chrUextra 12316993 12317390 -16687266 - ROO_I LTR Pao -1406 6850 6453 9 678 3345 184 23 14 chrUextra 12317490 12318229 -16686427 + SAR_DM Satellite Satellite 259 1004 -468 9 678 32 91 0 0 chrUextra 12318967 12319055 -16685601 + AT_rich Low_complexity Low_complexity 1 88 0 9 678 2964 173 35 20 chrUextra 12319171 12319907 -16684749 + SAR_DM Satellite Satellite 1 746 -300 9 678 6682 5 0 0 chrUextra 12320007 12320746 -16683910 - R2_DM LINE R2 -485 3122 2384 9 679 6383 12 1 1 chrUextra 12320846 12321585 -16683071 + DM297_I LTR Gypsy 2711 3449 -2718 9 679 1787 74 4 28 chrUextra 12321685 12321934 -16682722 + Baggins1 LINE LOA 4949 5191 -262 9 679 942 168 15 30 chrUextra 12322524 12322726 -16681930 - PROTOP_B DNA P -88 1065 867 9 679 2328 35 10 0 chrUextra 12322844 12323134 -16681522 - Gypsy7_I LTR Gypsy -1077 3907 3615 9 679 839 72 88 0 chrUextra 12323135 12323260 -16681396 - Gypsy7_I LTR Gypsy -1650 3334 3199 9 679 3042 154 28 25 chrUextra 12323397 12324044 -16680612 + SAR_DM Satellite Satellite 275 923 -549 9 679 233 40 0 0 chrUextra 12324052 12324102 -16680554 - DOC LINE Jockey 0 4725 4676 9 679 3700 28 0 31 chrUextra 12325193 12325644 -16679012 - Baggins1 LINE LOA 0 5453 5017 9 679 1113 30 0 8 chrUextra 12325648 12325780 -16678876 - Baggins1 LINE LOA -97 5356 5226 9 679 2736 183 15 68 chrUextra 12325882 12326619 -16678037 - SAR_DM Satellite Satellite -299 1173 476 9 679 3335 168 20 16 chrUextra 12326725 12327457 -16677199 + SAR_DM Satellite Satellite 224 958 -514 9 679 2756 176 69 15 chrUextra 12327562 12328295 -16676361 - SAR_DM Satellite Satellite -535 772 1 9 679 4474 18 10 0 chrUextra 12328397 12328911 -16675745 + R1_DM LINE R1 4838 5356 0 9 679 1237 88 11 21 chrUextra 12328950 12329136 -16675520 + R1_DM LINE R1 45 228 -5128 9 679 2729 28 11 0 chrUextra 12329236 12329588 -16675068 - DOC5_DM LINE Jockey -348 4334 3979 9 679 613 134 43 17 chrUextra 12329607 12329807 -16674849 - DMCR1A LINE CR1 -4010 460 365 9 679 246 191 0 0 chrUextra 12329874 12329921 -16674735 + DMCR1A LINE CR1 744 790 -3680 9 679 28 48 0 0 chrUextra 12330336 12330378 -16674278 + AT_rich Low_complexity Low_complexity 1 42 0 9 679 466 154 0 0 chrUextra 12330914 12330992 -16673664 + FW_DM LINE Jockey 2316 2393 -2299 9 679 914 127 7 0 chrUextra 12330993 12331135 -16673521 + FW_DM LINE Jockey 3570 3712 -980 9 679 2050 149 0 0 chrUextra 12331150 12331471 -16673185 + FW_DM LINE Jockey 3795 4115 -577 9 679 760 158 8 8 chrUextra 12331480 12331614 -16673042 + FW_DM LINE Jockey 4374 4507 -185 9 679 2970 51 50 0 chrUextra 12331753 12332251 -16672405 + PROTOP_A DNA P 573 1001 -104 9 679 6692 0 0 0 chrUextra 12332592 12333331 -16671325 - TIRANT_I LTR Gypsy -3951 3741 3003 9 679 6596 5 0 0 chrUextra 12333431 12334170 -16670486 + STALKER4_I LTR Gypsy 1628 2366 -4164 9 679 6173 18 3 0 chrUextra 12334270 12335009 -16669647 + STALKER4_I LTR Gypsy 3016 3756 -2774 9 679 3024 189 18 25 chrUextra 12335956 12336687 -16667969 - SAR_DM Satellite Satellite -300 1172 447 9 679 6661 1 0 0 chrUextra 12336787 12337526 -16667130 - MAX_I LTR Pao -5747 2167 1429 9 679 987 171 0 0 chrUextra 12337626 12338049 -16666607 + CT-rich Low_complexity Low_complexity 1 423 0 9 679 359 243 0 0 chrUextra 12338049 12338119 -16666537 + polypyrimidine Low_complexity Low_complexity 3 72 0 9 679 314 215 0 12 chrUextra 12338120 12338200 -16666456 + CT-rich Low_complexity Low_complexity 4 82 0 9 679 977 84 0 7 chrUextra 12338210 12338365 -16666291 + (TTCTCC)n Simple_repeat Simple_repeat 3 156 0 9 679 6206 16 0 15 chrUextra 12338465 12339204 -16665452 + IVK_DM LINE I 1487 2214 -3188 9 679 3391 180 10 7 chrUextra 12339316 12340037 -16664619 - SAR_DM Satellite Satellite -418 1054 332 9 679 2882 24 124 0 chrUextra 12340511 12340882 -16663774 + PROTOP DNA P 1 417 -4063 9 679 3534 170 11 8 chrUextra 12340986 12341721 -16662935 + SAR_DM Satellite Satellite 332 1068 -404 9 679 748 172 14 14 chrUextra 12341974 12342121 -16662535 + HETRP_DM Satellite Satellite 1529 1675 -197 9 679 707 212 7 7 chrUextra 12342279 12342426 -16662230 + HETRP_DM Satellite Satellite 1529 1675 -197 9 679 3031 3 6 0 chrUextra 12342660 12343006 -16661650 + DM176_I LTR Gypsy 3332 3679 -2741 9 679 3491 0 0 0 chrUextra 12343004 12343399 -16661257 + DM176_I LTR Gypsy 4297 4691 -1729 9 679 4728 75 15 3 chrUextra 12343499 12344233 -16660423 + DOC3_DM LINE Jockey 3033 3801 -924 9 679 22 56 0 0 chrUextra 12344376 12344412 -16660244 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 5408 0 3 0 chrUextra 12344484 12345077 -16659579 - LSU-rRNA_Dme rRNA rRNA 0 3900 3306 9 679 6729 3 1 0 chrUextra 12345177 12345916 -16658740 - SSU-rRNA_Dme rRNA rRNA -1239 756 17 9 679 4349 0 2 0 chrUextra 12346016 12346492 -16658164 + LSU-rRNA_Dme rRNA rRNA 3424 3900 0 9 679 29 28 0 0 chrUextra 12346564 12346600 -16658056 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 262 150 0 0 chrUextra 12346605 12346645 -16658011 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 679 236 175 0 0 chrUextra 12346697 12346737 -16657919 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 679 21 89 0 0 chrUextra 12347117 12347173 -16657483 + AT_rich Low_complexity Low_complexity 1 56 0 9 679 3632 2 2 2 chrUextra 12347192 12347594 -16657062 - SSU-rRNA_Dme rRNA rRNA 0 1995 1594 9 679 3412 24 7 9 chrUextra 12347694 12348124 -16656532 - DM176_I LTR Gypsy -5991 429 1 9 679 2104 30 15 4 chrUextra 12348124 12348394 -16656262 - DM176_LTR LTR Gypsy 0 507 179 9 679 477 18 0 0 chrUextra 12348378 12348433 -16656223 - DM176_LTR LTR Gypsy -224 283 229 9 679 6303 32 1 0 chrUextra 12349372 12350111 -16654545 - R1_DM LINE R1 -2750 2606 1867 9 679 5853 46 43 3 chrUextra 12350211 12350950 -16653706 + R1_DM LINE R1 1087 1855 -3501 9 679 6311 24 1 1 chrUextra 12351050 12351789 -16652867 - R1_DM LINE R1 -867 4489 3751 9 679 5721 25 7 3 chrUextra 12351889 12352565 -16652091 + R1_DM LINE R1 4678 5356 0 9 679 254 0 0 0 chrUextra 12352598 12352628 -16652028 + R1_DM LINE R1 1 30 -5326 9 679 6684 3 0 0 chrUextra 12352728 12353467 -16651189 + LSU-rRNA_Dme rRNA rRNA 2319 3057 -843 9 679 1687 24 14 5 chrUextra 12353569 12353782 -16650874 - NTS_DM Other Other -25 215 1 9 679 1835 17 17 17 chrUextra 12353782 12354022 -16650634 - NTS_DM Other Other 0 240 1 9 679 1817 21 17 17 chrUextra 12354022 12354262 -16650394 - NTS_DM Other Other 0 240 1 9 679 232 0 91 68 chrUextra 12354262 12354306 -16650350 - NTS_DM Other Other 0 240 196 9 679 876 71 79 0 chrUextra 12354415 12354541 -16650115 - Gypsy7_I LTR Gypsy -1650 3334 3199 9 679 1413 292 21 63 chrUextra 12354539 12355145 -16649511 + MICROPIA_I LTR Gypsy 1414 1994 -2482 9 679 6678 1 4 1 chrUextra 12355245 12355984 -16648672 + LSU-rRNA_Dme rRNA rRNA 2764 3504 -396 9 679 6190 1 0 3 chrUextra 12356084 12356823 -16647833 + DM412 LTR Gypsy 1302 2038 -4859 9 679 3456 237 31 24 chrUextra 12356934 12358165 -16646491 + SAR_DM Satellite Satellite 1 1240 -418 9 679 472 116 0 34 chrUextra 12358114 12358199 -16646457 - ARS406_DM Unknown Unknown -164 189 108 9 679 2163 66 44 20 chrUextra 12358199 12358494 -16646162 - Gypsy6A_LTR LTR Gypsy 0 420 119 9 679 550 224 75 0 chrUextra 12358729 12358876 -16645780 + HETRP_DM Satellite Satellite 1518 1675 -197 9 679 798 170 32 19 chrUextra 12359015 12359171 -16645485 + HETRP_DM Satellite Satellite 1518 1675 -197 9 679 929 143 12 6 chrUextra 12359178 12359340 -16645316 - HOBO DNA hAT 0 3016 2854 9 679 3502 0 5 0 chrUextra 12359440 12359836 -16644820 - ROO_I LTR Pao -7858 398 1 9 679 3160 0 0 0 chrUextra 12359836 12360179 -16644477 - ROO_LTR LTR Pao 0 428 86 9 679 3763 32 4 11 chrUextra 12360279 12360751 -16643905 - BATUMI_I LTR Pao -4586 3377 2909 9 679 1966 42 63 15 chrUextra 12360749 12361018 -16643638 - BATUMI_I LTR Pao -5715 2248 1967 9 679 2234 175 11 9 chrUextra 12361118 12361856 -16642800 - SAR_DM Satellite Satellite -663 739 1 9 679 3394 174 8 12 chrUextra 12361956 12362688 -16641968 - SAR_DM Satellite Satellite -549 923 195 9 679 5649 56 0 0 chrUextra 12362794 12363532 -16641124 + IDEFIX_I LTR Gypsy 3456 4193 -1435 9 679 400 248 46 15 chrUextra 12363635 12363766 -16640890 + XDMR_DM Unknown Unknown 219 353 -7 9 679 2750 202 29 15 chrUextra 12363651 12364370 -16640286 - SAR_DM Satellite Satellite -308 1164 436 9 679 2018 139 8 153 chrUextra 12364470 12365208 -16639448 - TAHRE LINE telomeric -2888 7575 7044 9 679 1239 114 54 18 chrUextra 12365309 12365532 -16639124 - MDG1_I LTR Gypsy -6365 231 1 9 679 1968 94 74 3 chrUextra 12365532 12365830 -16638826 - MDG1_LTR LTR Gypsy -30 412 94 9 679 339 105 0 0 chrUextra 12365832 12365889 -16638767 + (TTA)n Simple_repeat Simple_repeat 3 59 0 9 679 2000 37 4 0 chrUextra 12366642 12366884 -16637772 - DIVER2_LTR LTR Pao 0 385 143 9 679 6427 4 0 0 chrUextra 12366984 12367722 -16636934 - ROO_I LTR Pao -3085 5171 4434 9 679 4174 55 16 2 chrUextra 12367826 12368377 -16636279 + R1_DM LINE R1 679 1237 -4119 9 679 244 59 0 0 chrUextra 12368350 12368384 -16636272 + R1_DM LINE R1 1357 1390 -3966 9 679 1153 36 0 6 chrUextra 12368394 12368560 -16636096 - FW_DM LINE Jockey 0 4692 4528 9 679 6510 0 0 0 chrUextra 12368660 12369398 -16635258 - ROO_I LTR Pao -1350 6906 6169 9 679 4243 60 54 27 chrUextra 12369498 12370131 -16634525 - MAX_I LTR Pao -6048 1866 1217 9 679 534 51 316 0 chrUextra 12370131 12370229 -16634427 - MAX_I LTR Pao -6586 1328 1200 9 679 6794 1 0 0 chrUextra 12370336 12371074 -16633582 + BEL_I LTR Pao 2664 3401 -2003 9 679 28 48 0 0 chrUextra 12371306 12371348 -16633308 + AT_rich Low_complexity Low_complexity 1 42 0 9 679 514 119 36 0 chrUextra 12371621 12371705 -16632951 - NTS_DM Other Other -150 90 4 9 679 661 21 0 31 chrUextra 12371815 12371912 -16632744 - NTS_DM Other Other -78 162 69 9 679 1114 0 26 19 chrUextra 12372012 12372166 -16632490 + NTS_DM Other Other 86 240 0 9 679 1892 4 17 17 chrUextra 12372166 12372406 -16632250 + NTS_DM Other Other 1 240 0 9 679 1882 4 17 17 chrUextra 12372406 12372646 -16632010 + NTS_DM Other Other 1 240 0 9 679 831 48 0 0 chrUextra 12372646 12372750 -16631906 + NTS_DM Other Other 1 104 -136 9 679 2280 183 12 16 chrUextra 12372850 12373586 -16631070 - SAR_DM Satellite Satellite -737 733 1 9 679 6702 4 0 0 chrUextra 12373688 12374426 -16630230 + DIVER_I LTR Pao 2355 3092 -2551 9 679 2774 211 35 5 chrUextra 12374526 12375264 -16629392 + SAR_DM Satellite Satellite 274 1033 -439 9 679 6317 23 0 0 chrUextra 12375364 12376102 -16628554 + ACCORD2_I LTR Gypsy 4974 5711 -1501 9 679 6540 3 0 0 chrUextra 12376202 12376940 -16627716 - ROO_I LTR Pao -5932 2324 1587 9 679 4749 18 2 5 chrUextra 12377040 12377600 -16627056 - PROTOP_A DNA P -547 558 1 9 679 883 162 12 35 chrUextra 12377600 12377773 -16626883 - Gypsy12_LTR LTR Gypsy -2138 198 30 9 679 3441 163 14 10 chrUextra 12377891 12378596 -16626060 + SAR_DM Satellite Satellite 369 1076 -396 9 679 555 16 0 0 chrUextra 12378716 12378778 -16625878 - NTS_DM Other Other -178 62 1 9 679 881 25 19 19 chrUextra 12378778 12378956 -16625700 - NTS_DM Other Other 0 240 1 9 679 1503 15 20 20 chrUextra 12378956 12379159 -16625497 - NTS_DM Other Other 0 240 38 9 679 907 9 0 27 chrUextra 12379159 12379271 -16625385 - NTS_DM Other Other -107 133 25 9 679 949 23 0 8 chrUextra 12379323 12379454 -16625202 - NTS_DM Other Other -39 201 72 9 679 3040 190 20 29 chrUextra 12380392 12381127 -16623529 - SAR_DM Satellite Satellite -616 728 1 9 679 1620 3 0 0 chrUextra 12381597 12381902 -16622754 + (TTCTC)n Simple_repeat Simple_repeat 1 305 0 9 679 525 16 0 0 chrUextra 12381906 12381968 -16622688 + (GAGAA)n Simple_repeat Simple_repeat 2 63 0 9 679 6002 29 3 20 chrUextra 12382068 12382806 -16621850 + BATUMI_I LTR Pao 1229 1953 -6010 9 679 6580 1 1 4 chrUextra 12382906 12383644 -16621012 - LSU-rRNA_Dme rRNA rRNA -2279 1621 886 9 679 21 0 0 0 chrUextra 12384176 12384197 -16620459 + AT_rich Low_complexity Low_complexity 1 21 0 9 679 269 125 0 0 chrUextra 12384600 12384640 -16620016 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 679 22 56 0 0 chrUextra 12384653 12384689 -16619967 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 886 18 0 27 chrUextra 12384715 12384827 -16619829 + NTS_DM Other Other 25 133 -107 9 679 1243 25 6 6 chrUextra 12384827 12384991 -16619665 + NTS_DM Other Other 38 201 -39 9 679 907 9 0 27 chrUextra 12385043 12385155 -16619501 + NTS_DM Other Other 25 133 -107 9 679 1304 18 0 6 chrUextra 12385155 12385320 -16619336 + NTS_DM Other Other 38 201 -39 9 679 3459 106 23 21 chrUextra 12386260 12386996 -16617660 + TART_B1 LINE telomeric 735 1411 -9243 9 679 2041 170 8 3 chrUextra 12387102 12387834 -16616822 + SAR_DM Satellite Satellite 1 735 -635 9 679 6899 3 0 0 chrUextra 12387934 12388672 -16615984 - SSU-rRNA_Dme rRNA rRNA -1065 930 193 9 679 3530 175 19 9 chrUextra 12388773 12389507 -16615149 - SAR_DM Satellite Satellite -439 1033 293 9 679 6481 14 1 1 chrUextra 12389610 12390348 -16614308 + FW_DM LINE Jockey 1118 1855 -2837 9 679 3278 179 18 23 chrUextra 12390448 12391184 -16613472 + SAR_DM Satellite Satellite 436 1167 -305 9 679 6408 22 1 1 chrUextra 12391286 12392024 -16612632 - R1_DM LINE R1 -1456 3900 3163 9 679 415 92 92 0 chrUextra 12392124 12392189 -16612467 + Gypsy9_LTR LTR Gypsy 195 265 -71 9 679 3715 90 81 50 chrUextra 12392174 12392829 -16611827 + Gypsy9_I LTR Gypsy 12 686 -3991 9 679 6472 7 30 3 chrUextra 12392962 12393700 -16610956 + STALKER4_I LTR Gypsy 3342 4099 -2431 9 679 6575 11 12 0 chrUextra 12393800 12394538 -16610118 - FW_DM LINE Jockey -205 4487 3741 9 679 947 99 11 20 chrUextra 12394640 12395376 -16609280 + RSP Satellite Satellite 1 729 0 9 679 3708 77 0 2 chrUextra 12395476 12395961 -16608695 - HETA LINE telomeric -3582 2499 2016 9 679 793 181 5 77 chrUextra 12395992 12396214 -16608442 - TAHRE LINE telomeric -10032 431 226 9 679 6525 16 1 0 chrUextra 12396314 12397052 -16607604 - FW_DM LINE Jockey -1577 3115 2377 9 679 6340 19 5 1 chrUextra 12397152 12397890 -16606766 + Gypsy4_I LTR Gypsy 4663 5403 -885 9 679 246 216 0 19 chrUextra 12398046 12398098 -16606558 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 268 196 0 19 chrUextra 12398138 12398190 -16606466 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 278 176 0 19 chrUextra 12398221 12398273 -16606383 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 22 56 0 0 chrUextra 12398286 12398322 -16606334 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 936 9 0 27 chrUextra 12398348 12398460 -16606196 + NTS_DM Other Other 25 133 -107 9 679 1320 18 0 12 chrUextra 12398460 12398626 -16606030 + NTS_DM Other Other 38 201 -39 9 679 376 21 0 60 chrUextra 12398678 12398728 -16605928 + NTS_DM Other Other 25 71 -169 9 679 4775 40 0 5 chrUextra 12398981 12399566 -16605090 + IDEFIX_I LTR Gypsy 1 582 -5046 9 679 2533 21 0 0 chrUextra 12399666 12399952 -16604704 + R1_DM LINE R1 5069 5354 -2 9 679 3165 70 5 5 chrUextra 12399987 12400404 -16604252 + R1_DM LINE R1 1 417 -4939 9 679 3093 175 62 12 chrUextra 12400506 12401229 -16603427 + SAR_DM Satellite Satellite 273 1031 -441 9 679 3294 188 13 20 chrUextra 12401342 12402080 -16602576 - SAR_DM Satellite Satellite -626 733 1 9 679 511 0 0 0 chrUextra 12402180 12402235 -16602421 - NTS_DM Other Other -148 92 38 9 679 936 9 0 27 chrUextra 12402235 12402347 -16602309 - NTS_DM Other Other -107 133 25 9 679 1350 18 0 6 chrUextra 12402399 12402564 -16602092 - NTS_DM Other Other -39 201 38 9 679 906 9 0 35 chrUextra 12402564 12402677 -16601979 - NTS_DM Other Other -107 133 25 9 679 22 56 0 0 chrUextra 12402703 12402739 -16601917 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 248 176 0 38 chrUextra 12402752 12402805 -16601851 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 679 3443 178 12 11 chrUextra 12403025 12403754 -16600902 - SAR_DM Satellite Satellite -514 958 229 9 679 6562 7 1 3 chrUextra 12403856 12404594 -16600062 - R1_DM LINE R1 -1375 3981 3245 9 679 3811 0 5 0 chrUextra 12404694 12405112 -16599544 - DM1731_I LTR Copia -3556 420 1 9 679 2725 41 0 0 chrUextra 12405112 12405432 -16599224 - DM1731_LTR LTR Copia 0 336 17 9 679 6802 0 0 1 chrUextra 12405532 12406270 -16598386 - DMRT1B LINE R1 -1222 3961 3225 9 679 6826 5 0 0 chrUextra 12406370 12407108 -16597548 - DM1731_I LTR Copia -1791 2185 1448 9 679 3589 182 8 8 chrUextra 12407208 12407946 -16596710 - SAR_DM Satellite Satellite -488 984 247 9 679 6723 3 0 0 chrUextra 12408046 12408784 -16595872 + R1_DM LINE R1 2226 2963 -2393 9 679 6799 1 0 0 chrUextra 12408884 12409622 -16595034 - DOC LINE Jockey -1715 3010 2273 9 679 607 29 0 0 chrUextra 12409722 12409792 -16594864 - Gypsy4_I LTR Gypsy -6218 70 1 9 679 2279 42 7 37 chrUextra 12409792 12410088 -16594568 - Gypsy4_LTR LTR Gypsy 0 287 1 9 679 1135 90 18 12 chrUextra 12410195 12410364 -16594292 + HOBO DNA hAT 23 192 -2824 9 679 238 191 21 0 chrUextra 12410413 12410460 -16594196 + HOBO DNA hAT 193 240 -2776 9 679 6730 0 1 0 chrUextra 12410560 12411298 -16593358 + LSU-rRNA_Dme rRNA rRNA 461 1199 -2701 9 679 6438 5 0 0 chrUextra 12411401 12412136 -16592520 - R1_DM LINE R1 -4232 1124 390 9 679 504 196 0 61 chrUextra 12413912 12414026 -16590630 - HETRP_DM Satellite Satellite -248 1624 1518 9 679 729 184 13 26 chrUextra 12414156 12414312 -16590344 - HETRP_DM Satellite Satellite -190 1682 1529 9 679 733 211 56 66 chrUextra 12414434 12414647 -16590009 - HETRP_DM Satellite Satellite -188 1684 1474 9 679 6802 1 0 0 chrUextra 12414750 12415488 -16589168 - DOC LINE Jockey -72 4653 3916 9 679 3502 37 43 2 chrUextra 12415590 12416028 -16588628 + PROTOP DNA P 101 556 -3924 9 679 2107 58 4 0 chrUextra 12416025 12416285 -16588371 + PROTOP DNA P 4220 4480 0 9 679 4961 78 56 31 chrUextra 12417264 12418002 -16586654 + TART LINE telomeric 6901 7656 -6821 9 679 2917 253 3 3 chrUextra 12418111 12418825 -16585831 - ROVER-I_DM LTR Gypsy -3094 3490 2777 9 679 5493 39 106 22 chrUextra 12418940 12419674 -16584982 + BATUMI_I LTR Pao 1278 2073 -5890 9 679 6583 12 0 7 chrUextra 12419778 12420516 -16584140 - Gypsy4_I LTR Gypsy -4104 2184 1452 9 679 2348 133 22 31 chrUextra 12420616 12421352 -16583304 - DMSAT6 Satellite Satellite -134 728 1 9 679 2169 210 103 44 chrUextra 12422331 12423030 -16581626 + Gypsy12_LTR LTR Gypsy 831 1570 -766 9 679 1700 171 15 9 chrUextra 12423130 12423467 -16581189 - SAR_DM Satellite Satellite -662 810 472 9 679 1886 172 13 11 chrUextra 12423487 12423868 -16580788 - SAR_DM Satellite Satellite -614 858 477 9 679 6744 0 1 0 chrUextra 12423968 12424706 -16579950 - ROO_I LTR Pao -1656 6600 5862 9 679 6320 29 41 0 chrUextra 12424806 12425544 -16579112 + R1_DM LINE R1 4104 4871 -485 9 679 2867 9 0 0 chrUextra 12425644 12425959 -16578697 - R1_DM LINE R1 -3 5353 5039 9 679 3946 0 0 0 chrUextra 12425961 12426382 -16578274 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2229 9 679 6419 23 0 0 chrUextra 12426482 12427220 -16577436 - R1_DM LINE R1 -2491 2865 2128 9 679 6052 39 3 18 chrUextra 12427320 12428058 -16576598 - CIRCE LINE Composite -3098 3258 2532 9 679 5253 35 6 3 chrUextra 12428158 12428785 -16575871 + DMRT1B LINE R1 4555 5183 0 9 679 426 11 99 0 chrUextra 12428803 12428894 -16575762 + (CAGAC)n Simple_repeat Simple_repeat 1 100 0 9 679 6126 32 12 0 chrUextra 12428996 12429734 -16574922 + MDG1_I LTR Gypsy 4835 5581 -1015 9 679 778 192 29 0 chrUextra 12429840 12430012 -16574644 - SAR_DM Satellite Satellite -749 723 547 9 679 235 235 180 32 chrUextra 12429884 12430073 -16574583 + XDMR_DM Unknown Unknown 6 222 -138 9 679 2717 172 7 7 chrUextra 12430032 12430572 -16574084 - SAR_DM Satellite Satellite -396 1076 537 9 679 361 0 24 0 chrUextra 12430672 12430714 -16573942 - LSU-rRNA_Dme rRNA rRNA -2070 1830 1788 9 679 5814 3 6 5 chrUextra 12430755 12431410 -16573246 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1136 9 679 2661 92 20 9 chrUextra 12431510 12432248 -16572408 - DMSAT6 Satellite Satellite -95 746 1 9 679 3520 171 10 22 chrUextra 12432350 12433081 -16571575 - SAR_DM Satellite Satellite -382 1090 369 9 679 1455 18 6 0 chrUextra 12433186 12433357 -16571299 - FW_DM LINE Jockey -1921 2771 2600 9 679 3892 22 2 0 chrUextra 12433356 12433801 -16570855 - FW_DM LINE Jockey -2499 2193 1748 9 679 1054 9 0 0 chrUextra 12433808 12433924 -16570732 + ROO_I LTR Pao 4193 4308 -3948 9 679 3667 144 10 13 chrUextra 12434024 12434762 -16569894 + BATUMI_I LTR Pao 4236 4969 -2945 9 679 6043 6 0 65 chrUextra 12434862 12435600 -16569056 - Gypsy2_I LTR Gypsy -1855 4280 3591 9 679 3559 33 70 19 chrUextra 12435700 12436311 -16568345 + PROTOP DNA P 207 753 -3727 9 679 745 41 20 0 chrUextra 12436340 12436438 -16568218 + PROTOP_A DNA P 700 799 -306 9 679 21 89 0 0 chrUextra 12437065 12437121 -16567535 + AT_rich Low_complexity Low_complexity 1 56 0 9 679 1266 0 0 0 chrUextra 12437140 12437276 -16567380 - SSU-rRNA_Dme rRNA rRNA 0 1995 1860 9 679 846 0 0 0 chrUextra 12438020 12438114 -16566542 + (TTGTG)n Simple_repeat Simple_repeat 1 94 0 9 679 3939 0 0 0 chrUextra 12439052 12439479 -16565177 - ROO_I LTR Pao -7829 427 1 9 679 2905 3 0 0 chrUextra 12439479 12439790 -16564866 - ROO_LTR LTR Pao 0 428 118 9 679 756 0 0 0 chrUextra 12439890 12439971 -16564685 + LSU-rRNA_Dme rRNA rRNA 3820 3900 0 9 679 268 196 0 19 chrUextra 12440072 12440124 -16564532 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 268 196 0 19 chrUextra 12440164 12440216 -16564440 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 278 176 0 19 chrUextra 12440247 12440299 -16564357 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 22 56 0 0 chrUextra 12440312 12440348 -16564308 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 936 9 0 27 chrUextra 12440374 12440486 -16564170 + NTS_DM Other Other 25 133 -107 9 679 1124 21 7 7 chrUextra 12440486 12440628 -16564028 + NTS_DM Other Other 38 179 -61 9 679 6630 7 0 0 chrUextra 12440728 12441466 -16563190 + DMRT1B LINE R1 1171 1908 -3275 9 679 280 250 0 0 chrUextra 12442405 12442473 -16562183 + (AATAG)n Simple_repeat Simple_repeat 2 69 0 9 679 540 222 0 0 chrUextra 12442474 12442708 -16561948 + (CATAG)n Simple_repeat Simple_repeat 1 234 0 9 679 520 101 10 0 chrUextra 12442734 12442833 -16561823 - G2_DM LINE Jockey -3 3099 3000 9 679 2495 39 13 6 chrUextra 12442829 12443142 -16561514 - G2_DM LINE Jockey -211 2891 2577 9 679 4918 42 0 0 chrUextra 12443242 12443821 -16560835 + R1_DM LINE R1 1250 1828 -3528 9 679 1301 38 0 0 chrUextra 12443819 12443979 -16560677 + R1_DM LINE R1 1317 1476 -3880 9 679 6001 19 18 0 chrUextra 12444083 12444818 -16559838 - LSU-rRNA_Dme rRNA rRNA -221 3679 2932 9 679 2725 6 0 12 chrUextra 12444918 12445243 -16559413 - SSU-rRNA_Dme rRNA rRNA -1674 321 1 9 679 32 0 0 0 chrUextra 12445375 12445407 -16559249 + AT_rich Low_complexity Low_complexity 1 32 0 9 679 5991 4 37 3 chrUextra 12445756 12446494 -16558162 + STALKER4_I LTR Gypsy 5081 5843 -687 9 679 5971 12 0 0 chrUextra 12446594 12447332 -16557324 + QUASIMODO_I LTR Gypsy 986 1723 -4337 9 679 2432 171 14 10 chrUextra 12447436 12447471 -16557185 - SAR_DM Satellite Satellite -435 733 690 9 679 1065 76 0 0 chrUextra 12447471 12447629 -16557027 + ARS406_DM Unknown Unknown 1 158 -195 9 679 2432 171 14 10 chrUextra 12447629 12448166 -16556490 - SAR_DM Satellite Satellite -435 689 1 9 679 2861 176 44 10 chrUextra 12448277 12448998 -16555658 + SAR_DM Satellite Satellite 192 937 -535 9 679 1875 177 194 42 chrUextra 12449107 12449840 -16554816 + HETA LINE telomeric 5100 5890 -191 9 679 1499 88 20 4 chrUextra 12449944 12450196 -16554460 - MDG1_I LTR Gypsy -5213 1383 1128 9 679 2566 76 10 10 chrUextra 12450268 12450681 -16553975 - MDG1_I LTR Gypsy -5462 1134 722 9 679 1243 25 6 12 chrUextra 12450781 12450944 -16553712 - DIVER_I LTR Pao -5481 162 1 9 679 1182 107 0 100 chrUextra 12450965 12451214 -16553442 - DIVER_LTR LTR Pao 0 224 1 9 679 1489 88 0 55 chrUextra 12451215 12451468 -16553188 - CIRCE LINE Composite -1869 4487 4249 9 679 393 0 0 0 chrUextra 12451469 12451518 -16553138 + DMSAT6 Satellite Satellite 326 374 -96 9 84 3151 176 14 14 chrUextra 12451619 12452355 -16552301 - SAR_DM Satellite Satellite -449 1023 288 9 680 2150 184 11 7 chrUextra 12452455 12453192 -16551464 + SAR_DM Satellite Satellite 1 740 -677 9 680 27 29 0 0 chrUextra 12453456 12453490 -16551166 + AT_rich Low_complexity Low_complexity 1 34 0 9 680 2910 189 12 11 chrUextra 12454139 12454866 -16549790 - SAR_DM Satellite Satellite -515 957 230 9 680 1850 4 4 75 chrUextra 12454966 12455218 -16549438 + Gypsy12_LTR LTR Gypsy 2103 2336 0 9 680 3468 34 27 23 chrUextra 12455218 12455703 -16548953 + Gypsy12_I LTR Gypsy 1 487 -5059 9 680 3219 169 10 10 chrUextra 12455806 12456528 -16548128 - SAR_DM Satellite Satellite -425 1047 326 9 680 6450 1 0 0 chrUextra 12456640 12457377 -16547279 + Gypsy6_I LTR Gypsy 977 1713 -5299 9 680 5095 18 15 0 chrUextra 12457477 12458089 -16546567 + CIRCE LINE Composite 5736 6356 0 9 680 999 32 0 0 chrUextra 12458089 12458214 -16546442 + CIRCE LINE Composite 1 125 -6231 9 680 2864 183 16 22 chrUextra 12458318 12459050 -16545606 - SAR_DM Satellite Satellite -313 1159 432 9 680 1620 5 0 0 chrUextra 12459151 12459365 -16545291 + (TCTTG)n Simple_repeat Simple_repeat 1 214 0 9 680 2925 137 0 2 chrUextra 12460248 12460725 -16543931 - HMSBEAGLE_I LTR Gypsy -711 5818 5343 9 680 201 121 0 0 chrUextra 12461355 12461388 -16543268 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 680 2741 186 27 11 chrUextra 12462499 12463236 -16541420 + SAR_DM Satellite Satellite 1 748 -282 9 680 5711 47 0 6 chrUextra 12463349 12464073 -16540583 + BATUMI_I LTR Pao 5224 5943 -2020 9 680 2953 179 11 23 chrUextra 12464173 12464900 -16539756 + SAR_DM Satellite Satellite 402 1119 -353 9 680 339 191 0 21 chrUextra 12464814 12464910 -16539746 - XDMR_DM Unknown Unknown 0 360 267 9 680 6172 7 0 3 chrUextra 12465010 12465747 -16538909 + STALKER4_I LTR Gypsy 4212 4946 -1584 9 680 24 53 0 0 chrUextra 12466545 12466583 -16538073 + AT_rich Low_complexity Low_complexity 1 38 0 9 680 2291 0 4 0 chrUextra 12466684 12466947 -16537709 + SSU-rRNA_Dme rRNA rRNA 1732 1995 0 9 680 21 89 0 0 chrUextra 12466966 12467022 -16537634 + AT_rich Low_complexity Low_complexity 1 56 0 9 680 4771 11 4 0 chrUextra 12467521 12468084 -16536572 - R1_DM LINE R1 -4791 565 1 9 680 1494 0 0 6 chrUextra 12468084 12468258 -16536398 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2460 9 680 6415 0 0 0 chrUextra 12468358 12469095 -16535561 + STALKER4_I LTR Gypsy 3657 4393 -2137 9 680 920 71 4 19 chrUextra 12469203 12469932 -16534724 - RSP Satellite Satellite -45 718 1 9 680 6248 3 1 0 chrUextra 12470032 12470769 -16533887 + IDEFIX_I LTR Gypsy 1885 2622 -3006 9 680 2473 116 59 14 chrUextra 12470869 12471576 -16533080 + DMRT1B LINE R1 4445 5183 0 9 680 6166 0 0 0 chrUextra 12471709 12472443 -16532213 + ROO_I LTR Pao 21 754 -7502 9 680 6367 1 0 0 chrUextra 12472543 12473280 -16531376 + DOC LINE Jockey 2924 3660 -1065 9 680 353 23 0 0 chrUextra 12473380 12473423 -16531233 - NTS_DM Other Other -160 80 38 9 680 870 9 0 27 chrUextra 12473423 12473535 -16531121 - NTS_DM Other Other -107 133 25 9 680 22 56 0 0 chrUextra 12473561 12473597 -16531059 + AT_rich Low_complexity Low_complexity 1 36 0 9 680 255 125 0 0 chrUextra 12473610 12473650 -16531006 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 246 150 0 0 chrUextra 12473693 12473733 -16530923 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 246 150 0 0 chrUextra 12473785 12473825 -16530831 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 246 150 0 0 chrUextra 12473877 12473917 -16530739 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 22 56 0 0 chrUextra 12473922 12473958 -16530698 + AT_rich Low_complexity Low_complexity 1 36 0 9 680 680 23 12 0 chrUextra 12474031 12474117 -16530539 - LSU-rRNA_Dme rRNA rRNA 0 3900 3814 9 680 1252 18 0 6 chrUextra 12474263 12474428 -16530228 - NTS_DM Other Other -39 201 38 9 680 848 18 0 27 chrUextra 12474428 12474540 -16530116 - NTS_DM Other Other -107 133 25 9 680 1252 18 0 6 chrUextra 12474592 12474757 -16529899 - NTS_DM Other Other -39 201 38 9 680 870 9 0 27 chrUextra 12474757 12474869 -16529787 - NTS_DM Other Other -107 133 25 9 680 22 56 0 0 chrUextra 12474895 12474931 -16529725 + AT_rich Low_complexity Low_complexity 1 36 0 9 680 6170 4 3 3 chrUextra 12475054 12475791 -16528865 - LSU-rRNA_Dme rRNA rRNA -2582 1318 582 9 680 1490 0 0 16 chrUextra 12475891 12476085 -16528571 + DOC6_DM LINE Jockey 4032 4222 0 9 680 263 287 23 54 chrUextra 12476098 12476359 -16528297 + QUASIMODO_I LTR Gypsy 5678 5930 -130 9 680 21 0 0 0 chrUextra 12476367 12476388 -16528268 + AT_rich Low_complexity Low_complexity 1 21 0 9 680 6355 4 0 0 chrUextra 12476728 12477465 -16527191 - MDG1_I LTR Gypsy -2008 4588 3852 9 680 6293 1 1 4 chrUextra 12477565 12478302 -16526354 + SSU-rRNA_Dme rRNA rRNA 878 1612 -383 9 680 3378 0 2 0 chrUextra 12478404 12478806 -16525850 + HMSBEAGLE_I LTR Gypsy 6127 6529 0 9 680 2316 8 0 0 chrUextra 12478806 12479072 -16525584 + DMLTR5 LTR Gypsy 1 266 0 9 680 435 119 0 0 chrUextra 12479072 12479139 -16525517 + (TA)n Simple_repeat Simple_repeat 2 68 0 9 680 2711 151 31 55 chrUextra 12480079 12480812 -16523844 - SAR_DM Satellite Satellite -659 715 1 9 680 5945 19 15 1 chrUextra 12480913 12481650 -16523006 - NINJA_I LTR Pao -63 5948 5202 9 680 2147 139 7 12 chrUextra 12481750 12482178 -16522478 - STALKER4_I LTR Gypsy -6721 681 235 9 680 289 96 0 37 chrUextra 12482352 12482406 -16522250 - STALKER4_I LTR Gypsy -7350 52 1 9 680 330 25 0 0 chrUextra 12482406 12482433 -16522223 - STALKER4_I LTR Gypsy -6503 27 1 9 680 432 0 0 19 chrUextra 12482433 12482487 -16522169 - STALKER4_LTR LTR Gypsy 0 402 350 9 680 6049 26 1 0 chrUextra 12482587 12483324 -16521332 + R1_DM LINE R1 1788 2525 -2831 9 680 572 122 19 0 chrUextra 12483424 12483531 -16521125 - ARS406_DM Unknown Unknown -244 109 1 9 680 2864 182 16 10 chrUextra 12483441 12484129 -16520527 + SAR_DM Satellite Satellite 198 889 -583 9 680 699 67 19 0 chrUextra 12484055 12484160 -16520496 - ARS406_DM Unknown Unknown -164 189 83 9 680 6474 0 0 1 chrUextra 12484261 12484998 -16519658 - BEL_I LTR Pao -295 5109 4374 9 680 1763 10 0 0 chrUextra 12485098 12485303 -16519353 + R1_DM LINE R1 5152 5356 0 9 680 4626 2 0 2 chrUextra 12485301 12485835 -16518821 + LSU-rRNA_Dme rRNA rRNA 2640 3172 -728 9 680 6452 1 1 0 chrUextra 12485935 12486672 -16517984 + SSU-rRNA_Dme rRNA rRNA 146 883 -1112 9 680 6115 20 0 0 chrUextra 12486772 12487509 -16517147 + R1_DM LINE R1 2050 2786 -2570 9 680 451 188 33 33 chrUextra 12487718 12487839 -16516817 + HOBO DNA hAT 2845 2965 -51 9 680 710 63 0 0 chrUextra 12487863 12487958 -16516698 + DNAREP1_DM LINE Penelope 500 594 0 9 680 482 80 11 43 chrUextra 12487976 12488068 -16516588 - TRANSIB3 DNA Transib -2791 92 4 9 680 2056 51 11 0 chrUextra 12488071 12488346 -16516310 + DOC3_DM LINE Jockey 2578 2855 -1885 9 680 1861 0 17 13 chrUextra 12488470 12488709 -16515947 + NTS_DM Other Other 1 240 0 9 680 1847 4 17 13 chrUextra 12488709 12488948 -16515708 + NTS_DM Other Other 1 240 0 9 680 1277 19 0 6 chrUextra 12488948 12489111 -16515545 + NTS_DM Other Other 1 162 -78 9 680 5963 9 15 1 chrUextra 12489283 12490018 -16514638 + G_DM LINE Jockey 171 915 -3431 9 680 2610 31 0 0 chrUextra 12490120 12490442 -16514214 + DM1731_LTR LTR Copia 14 335 -1 9 680 1587 15 0 0 chrUextra 12490442 12490787 -16513869 + (TTATA)n Simple_repeat Simple_repeat 1 345 0 9 680 591 14 0 0 chrUextra 12490787 12490857 -16513799 + DM1731_LTR LTR Copia 5 74 -262 9 680 871 0 0 0 chrUextra 12490957 12491060 -16513596 - MAX_LTR LTR Pao -218 103 1 9 680 1930 26 0 0 chrUextra 12491060 12491292 -16513364 + PROTOP DNA P 4249 4480 0 9 680 24 0 0 0 chrUextra 12491669 12491693 -16512963 + AT_rich Low_complexity Low_complexity 1 24 0 9 680 2161 42 63 0 chrUextra 12491794 12492080 -16512576 - PROTOP DNA P -4176 304 1 9 680 6350 5 1 0 chrUextra 12492631 12493368 -16511288 - MICROPIA_I LTR Gypsy -3064 1412 675 9 680 471 147 10 10 chrUextra 12493468 12493564 -16511092 + ARS406_DM Unknown Unknown 94 189 -164 9 680 2923 162 31 21 chrUextra 12493483 12494181 -16510475 - SAR_DM Satellite Satellite -577 895 191 9 680 582 182 0 0 chrUextra 12494084 12494205 -16510451 + ARS406_DM Unknown Unknown 1 121 -232 9 680 3265 169 10 8 chrUextra 12494325 12495041 -16509615 + SAR_DM Satellite Satellite 326 1042 -430 9 680 4017 2 2 6 chrUextra 12495142 12495627 -16509029 + BATUMI_I LTR Pao 7481 7963 0 9 680 1903 20 0 31 chrUextra 12495627 12495879 -16508777 + BATUMI_I LTR Pao 7002 7245 -718 9 680 39 50 0 0 chrUextra 12496004 12496064 -16508592 + AT_rich Low_complexity Low_complexity 1 60 0 9 680 428 190 0 69 chrUextra 12496586 12496716 -16507940 - Gypsy8_I LTR Gypsy -4123 224 104 9 680 6345 4 0 0 chrUextra 12496816 12497553 -16507103 + FW_DM LINE Jockey 3137 3873 -819 9 680 2442 39 0 0 chrUextra 12498081 12498390 -16506266 + DIVER2_I LTR Pao 1223 1531 -2616 9 680 2733 9 0 0 chrUextra 12499327 12499647 -16505009 + PROTOP_A DNA P 786 1105 0 9 680 2430 67 58 0 chrUextra 12499654 12499996 -16504660 + TART LINE telomeric 1287 1648 -12829 9 680 343 47 328 0 chrUextra 12500000 12500064 -16504592 + TART LINE telomeric 1653 1737 -12740 9 680 234 0 0 0 chrUextra 12500874 12500900 -16503756 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 680 2938 165 11 16 chrUextra 12501001 12501738 -16502918 - BATUMI_I LTR Pao -3014 4900 4205 9 680 817 0 0 0 chrUextra 12501857 12501953 -16502703 - NTS_DM Other Other -107 133 38 9 680 802 9 9 36 chrUextra 12501953 12502065 -16502591 - NTS_DM Other Other -107 133 25 9 680 21 57 0 0 chrUextra 12502091 12502126 -16502530 + AT_rich Low_complexity Low_complexity 1 35 0 9 680 1252 18 0 6 chrUextra 12502126 12502291 -16502365 - NTS_DM Other Other -39 201 38 9 680 870 9 0 27 chrUextra 12502291 12502403 -16502253 - NTS_DM Other Other -107 133 25 9 680 811 25 0 8 chrUextra 12502455 12502575 -16502081 - NTS_DM Other Other -39 201 83 9 680 4892 19 0 0 chrUextra 12502675 12503268 -16501388 - STALKER4_I LTR Gypsy -1528 5002 4410 9 680 1190 14 35 0 chrUextra 12503267 12503412 -16501244 - STALKER4_I LTR Gypsy -2235 4295 4146 9 680 6001 18 27 1 chrUextra 12504349 12505085 -16499571 + Copia2_I LTR Copia 3408 4162 0 9 680 2163 45 3 37 chrUextra 12505412 12505709 -16498947 + Gypsy4_LTR LTR Gypsy 1 287 0 9 680 408 209 0 0 chrUextra 12505837 12505923 -16498733 + Gypsy_I LTR Gypsy 6094 6179 -328 9 680 5776 24 45 1 chrUextra 12506023 12506760 -16497896 - R1_DM LINE R1 -1096 4260 3492 9 680 2893 3 0 0 chrUextra 12506860 12507192 -16497464 - SSU-rRNA_Dme rRNA rRNA -1663 332 1 9 680 32 0 0 0 chrUextra 12507324 12507356 -16497300 + AT_rich Low_complexity Low_complexity 1 32 0 9 680 6261 0 0 1 chrUextra 12507697 12508434 -16496222 + ROO_I LTR Pao 3706 4441 -3815 9 680 1500 54 5 0 chrUextra 12508534 12508737 -16495919 - R1_DM LINE R1 -4744 612 409 9 680 4248 30 2 4 chrUextra 12508738 12509270 -16495386 + R1_DM LINE R1 4753 5283 -73 9 680 6049 3 0 0 chrUextra 12509371 12510108 -16494548 + DM176_I LTR Gypsy 986 1722 -4698 9 680 5699 26 67 5 chrUextra 12510208 12510945 -16493711 + FW_DM LINE Jockey 3604 4385 -307 9 680 2963 177 9 8 chrUextra 12511045 12511782 -16492874 - SAR_DM Satellite Satellite -270 1202 195 9 680 6320 3 0 0 chrUextra 12511882 12512619 -16492037 + TABOR_I LTR Gypsy 4064 4800 -1536 9 680 5282 52 29 14 chrUextra 12513556 12514293 -16490363 - R1_DM LINE R1 -4289 1067 320 9 680 3198 157 12 13 chrUextra 12514393 12515129 -16489527 - BATUMI_I LTR Pao -2945 4969 4236 9 680 3182 0 0 0 chrUextra 12515230 12515593 -16489063 + LSU-rRNA_Dme rRNA rRNA 2270 2632 -1268 9 680 3193 5 5 0 chrUextra 12515593 12515967 -16488689 + R1_DM LINE R1 1 376 -4980 9 680 6245 1 0 1 chrUextra 12516067 12516804 -16487852 + ROO_I LTR Pao 2534 3269 -4987 9 680 2791 191 15 22 chrUextra 12516908 12517641 -16487015 - SAR_DM Satellite Satellite -300 1172 445 9 680 2436 77 21 30 chrUextra 12517741 12518477 -16486179 - DMSAT6 Satellite Satellite -53 728 1 9 680 3767 0 7 4 chrUextra 12518578 12519029 -16485627 + LSU-rRNA_Dme rRNA rRNA 1337 1788 -2112 9 680 2103 4 0 0 chrUextra 12519073 12519315 -16485341 + LSU-rRNA_Dme rRNA rRNA 1788 2029 -1871 9 680 5747 16 0 0 chrUextra 12520252 12520932 -16483724 - ROO_I LTR Pao -532 7724 7045 9 680 450 17 0 0 chrUextra 12520930 12520989 -16483667 - ROO_I LTR Pao -1382 6874 6816 9 680 503 88 175 10 chrUextra 12521089 12521192 -16483464 + DNAREP1_DM LINE Penelope 150 269 -325 9 680 947 45 30 8 chrUextra 12521174 12521308 -16483348 + Copia2_I LTR Copia 902 1038 -3124 9 680 3944 32 20 0 chrUextra 12521325 12521826 -16482830 + Copia2_I LTR Copia 1347 1857 -2305 9 680 3238 171 7 15 chrUextra 12521926 12522645 -16482011 + SAR_DM Satellite Satellite 371 1083 -389 9 680 225 78 0 105 chrUextra 12522606 12522663 -16481993 - XDMR_DM Unknown Unknown -9 351 301 9 680 2901 70 80 5 chrUextra 12522781 12523383 -16481273 + Gypsy12_I LTR Gypsy 4895 5541 -5 9 680 377 184 11 65 chrUextra 12523400 12523493 -16481163 + Gypsy12_LTR LTR Gypsy 13 100 -2236 9 680 2359 109 27 25 chrUextra 12523631 12524337 -16480319 - DMSAT6 Satellite Satellite 0 706 1 9 680 618 107 10 0 chrUextra 12524437 12524540 -16480116 - ARS406_DM Unknown Unknown -249 104 1 9 680 3025 189 8 10 chrUextra 12524448 12525174 -16479482 + SAR_DM Satellite Satellite 195 919 -553 9 680 2996 176 18 22 chrUextra 12525274 12526011 -16478645 + SAR_DM Satellite Satellite 419 1152 -320 9 680 963 16 117 0 chrUextra 12526111 12526239 -16478417 - PROTOP_A DNA P -962 143 1 9 680 6250 19 0 0 chrUextra 12526948 12527685 -16476971 + MAX_I LTR Pao 6200 6936 -978 9 680 4573 11 5 12 chrUextra 12527785 12528357 -16476299 + FW_DM LINE Jockey 4124 4691 -1 9 680 1132 90 39 0 chrUextra 12528344 12528522 -16476134 + MDG1_I LTR Gypsy 5454 5638 -958 9 680 6182 5 0 4 chrUextra 12528622 12529359 -16475297 + ROO_I LTR Pao 2293 3026 -5230 9 680 24 32 0 0 chrUextra 12529520 12529551 -16475105 + AT_rich Low_complexity Low_complexity 1 31 0 9 680 1494 28 0 0 chrUextra 12530296 12530475 -16474181 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 9 680 183 42 0 0 chrUextra 12530487 12530511 -16474145 + (TTATA)n Simple_repeat Simple_repeat 1 24 0 9 680 3747 7 2 0 chrUextra 12530539 12530990 -16473666 + MAX_I LTR Pao 7463 7914 0 9 680 363 0 0 0 chrUextra 12530990 12531033 -16473623 + MAX_LTR LTR Pao 1 43 -278 9 680 2415 174 20 23 chrUextra 12531134 12531735 -16472921 - SAR_DM Satellite Satellite -683 789 191 9 680 458 212 0 0 chrUextra 12531751 12531864 -16472792 - SAR_DM Satellite Satellite -396 1076 964 9 680 6214 5 1 1 chrUextra 12531970 12532707 -16471949 - R1_DM LINE R1 -3666 1690 954 9 680 26 74 0 0 chrUextra 12533135 12533189 -16471467 + AT_rich Low_complexity Low_complexity 1 54 0 9 680 359 236 70 85 chrUextra 12533222 12533421 -16471235 - HMSBEAGLE_I LTR Gypsy -6110 419 224 9 680 3069 195 15 20 chrUextra 12534482 12535218 -16469438 + SAR_DM Satellite Satellite 1 731 -208 9 680 2166 19 0 4 chrUextra 12535318 12535580 -16469076 - PROTOP_A DNA P -844 261 1 9 680 3887 6 0 0 chrUextra 12535580 12536055 -16468601 + QUASIMODO_I LTR Gypsy 4627 5101 -959 9 680 6347 5 0 0 chrUextra 12536155 12536892 -16467764 + Invader1_I LTR Gypsy 2313 3049 -137 9 680 1698 41 0 9 chrUextra 12536992 12537212 -16467444 - BEL_LTR LTR Pao -136 225 8 9 680 4508 13 0 0 chrUextra 12537203 12537729 -16466927 - BEL_I LTR Pao -16 5388 4863 9 680 6290 1 1 0 chrUextra 12537829 12538566 -16466090 + ROO_I LTR Pao 1195 1932 -6324 9 680 926 108 0 6 chrUextra 12538666 12538825 -16465831 + ARS406_DM Unknown Unknown 1 158 -195 9 680 2742 166 5 5 chrUextra 12538832 12539403 -16465253 - SAR_DM Satellite Satellite -569 903 333 9 680 1323 119 18 0 chrUextra 12540010 12540237 -16464419 - FW_DM LINE Jockey -8 4684 4454 9 680 6318 5 0 5 chrUextra 12540340 12541077 -16463579 + MICROPIA_I LTR Gypsy 2920 3652 -824 9 680 6187 15 0 4 chrUextra 12541177 12541914 -16462742 + Gypsy4_I LTR Gypsy 658 1391 -4897 9 680 6116 16 1 0 chrUextra 12542014 12542751 -16461905 + PROTOP DNA P 2102 2839 -1641 9 680 5131 88 18 1 chrUextra 12542851 12543588 -16461068 - R1_DM LINE R1 -3666 1690 942 9 680 3670 34 2 14 chrUextra 12543688 12544170 -16460486 + BATUMI_I LTR Pao 1599 2074 -5889 9 680 173 20 0 0 chrUextra 12544170 12544371 -16460285 + AT_rich Low_complexity Low_complexity 1 201 0 9 680 403 19 0 0 chrUextra 12544371 12544425 -16460231 + BATUMI_I LTR Pao 7050 7103 -860 9 680 23 68 0 0 chrUextra 12545101 12545145 -16459511 + AT_rich Low_complexity Low_complexity 1 44 0 9 680 26 30 0 0 chrUextra 12545191 12545224 -16459432 + AT_rich Low_complexity Low_complexity 1 33 0 9 680 6244 1 3 3 chrUextra 12545362 12546099 -16458557 + R1_DM LINE R1 1121 1857 -3499 9 680 34 24 0 0 chrUextra 12546395 12546436 -16458220 + AT_rich Low_complexity Low_complexity 1 41 0 9 680 996 206 198 45 chrUextra 12546446 12546936 -16457720 - HETA LINE telomeric -171 5910 5346 9 680 1233 0 0 0 chrUextra 12547036 12547173 -16457483 + (CACAA)n Simple_repeat Simple_repeat 3 139 0 9 680 3017 198 14 7 chrUextra 12547877 12548610 -16456046 + SAR_DM Satellite Satellite 1 738 -396 9 680 2063 182 14 4 chrUextra 12548711 12549439 -16455217 + SAR_DM Satellite Satellite 1 734 -677 9 680 264 75 25 0 chrUextra 12549407 12549447 -16455209 - ARS406_DM Unknown Unknown -164 189 149 9 680 1783 81 8 8 chrUextra 12549547 12549997 -16454659 - CIRCE LINE Composite -3654 2702 2203 9 680 1973 43 50 0 chrUextra 12550026 12550284 -16454372 - CIRCE LINE Composite -4474 1882 1612 9 680 6288 4 0 0 chrUextra 12550384 12551121 -16453535 - R1_DM LINE R1 -1908 3448 2712 9 680 786 9 0 84 chrUextra 12551221 12551340 -16453316 - DM176_LTR LTR Gypsy -398 109 1 9 680 4927 3 0 0 chrUextra 12551340 12551958 -16452698 - DM176_I LTR Gypsy 0 6420 5803 9 680 6278 1 3 1 chrUextra 12552058 12552795 -16451861 - LSU-rRNA_Dme rRNA rRNA -2553 1347 610 9 680 34 24 0 0 chrUextra 12553032 12553073 -16451583 + AT_rich Low_complexity Low_complexity 1 41 0 9 680 4891 2 0 0 chrUextra 12553899 12554469 -16450187 + FW_DM LINE Jockey 890 1459 -3233 9 680 3422 14 0 0 chrUextra 12555406 12555826 -16448830 + FW_DM LINE Jockey 1344 1763 -2929 9 680 1990 26 4 53 chrUextra 12555826 12556107 -16448549 - MDG3_LTR LTR Gypsy 0 267 1 9 680 306 0 0 0 chrUextra 12556107 12556143 -16448513 - MDG3_I LTR Gypsy 0 4986 4951 9 680 391 267 1 4 chrUextra 12556295 12556474 -16448182 + Gypsy11_I LTR Gypsy 3233 3387 -137 9 680 22 35 0 0 chrUextra 12556607 12556636 -16448020 + AT_rich Low_complexity Low_complexity 1 29 0 9 680 223 200 42 10 chrUextra 12556683 12556819 -16447837 + A-rich Low_complexity Low_complexity 1 140 0 9 680 337 27 12 37 chrUextra 12556827 12556897 -16447759 + STALKER4_I LTR Gypsy 6491 6530 0 9 680 574 37 0 0 chrUextra 12556898 12556980 -16447676 + Stalker3_LTR LTR Gypsy 2 83 -289 9 680 498 26 0 0 chrUextra 12557080 12557158 -16447498 + FW_DM LINE Jockey 4615 4692 0 9 680 4950 23 45 17 chrUextra 12557154 12557817 -16446839 - ROO_I LTR Pao -4051 4205 3524 9 680 2303 274 0 0 chrUextra 12557919 12558632 -16446024 + ROVER-I_DM LTR Gypsy 3401 4113 -2471 9 680 5633 46 5 3 chrUextra 12558754 12559491 -16445165 - R1_DM LINE R1 -3712 1644 906 9 680 2662 29 6 11 chrUextra 12559977 12560327 -16444329 + CIRCE LINE Composite 4981 5328 -1028 9 680 6340 3 0 1 chrUextra 12560427 12561163 -16443493 - DMRT1A LINE R1 -2744 2439 1705 9 680 4183 26 58 0 chrUextra 12561263 12561999 -16442657 + DMRT1B LINE R1 2359 3137 -2046 9 680 2064 122 6 22 chrUextra 12562099 12562461 -16442195 - Gypsy12_I LTR Gypsy -4968 578 223 9 680 881 159 101 35 chrUextra 12562597 12562825 -16441831 - Gypsy12_LTR LTR Gypsy -827 1509 1267 9 680 3809 2 0 2 chrUextra 12562935 12563379 -16441277 - LSU-rRNA_Dme rRNA rRNA -818 3082 2640 9 680 2502 0 0 3 chrUextra 12563381 12563671 -16440985 - R1_DM LINE R1 0 5356 5068 9 680 2180 140 60 23 chrUextra 12563794 12564427 -16440229 + Stalker2_I LTR Gypsy 291 999 -5531 9 680 3682 53 16 42 chrUextra 12564607 12565182 -16439474 - ROO_I LTR Pao -7583 673 114 9 680 1011 39 0 0 chrUextra 12565215 12565343 -16439313 - ROO_LTR LTR Pao 0 428 301 9 680 6007 25 0 0 chrUextra 12565443 12566162 -16438494 - R1_DM LINE R1 -612 4744 4026 9 680 4501 86 20 8 chrUextra 12566280 12567015 -16437641 + R1_DM LINE R1 3456 4009 -1347 9 680 3974 16 53 0 chrUextra 12567115 12567849 -16436807 - FW_DM LINE Jockey -557 4135 3363 9 680 5822 23 67 0 chrUextra 12567951 12568687 -16435969 + STALKER4_I LTR Gypsy 3860 4644 -1886 9 680 5474 0 0 38 chrUextra 12568832 12569523 -16435133 + LSU-rRNA_Dme rRNA rRNA 1 665 -3235 9 680 1456 329 17 2 chrUextra 12569759 12570353 -16434303 + Gypsy6_I LTR Gypsy 945 1547 -5465 9 680 3029 171 15 22 chrUextra 12570459 12571194 -16433462 + SAR_DM Satellite Satellite 374 1103 -369 9 680 2598 48 22 11 chrUextra 12571295 12571651 -16433005 + R1_DM LINE R1 1878 2237 -3119 9 680 553 33 275 0 chrUextra 12571733 12571824 -16432832 - Gypsy6A_LTR LTR Gypsy -234 186 71 9 680 971 122 48 27 chrUextra 12571842 12572028 -16432628 + R1_DM LINE R1 1 190 -5166 9 680 2251 10 64 91 chrUextra 12572131 12572461 -16432195 - MICROPIA_LTR LTR Gypsy -155 321 1 9 680 3256 12 0 5 chrUextra 12572461 12572867 -16431789 - MICROPIA_I LTR Gypsy 0 4476 4073 9 680 405 204 0 17 chrUextra 12572967 12573082 -16431574 + XDMR_DM Unknown Unknown 248 360 0 9 680 2869 192 6 17 chrUextra 12573005 12573703 -16430953 - SAR_DM Satellite Satellite -361 1111 422 9 680 645 302 22 15 chrUextra 12574032 12574537 -16430119 + Gypsy4_I LTR Gypsy 2255 3232 -3780 9 680 5570 34 43 0 chrUextra 12574639 12575375 -16429281 - FW_DM LINE Jockey -1268 3424 2657 9 680 2975 176 16 27 chrUextra 12575475 12576209 -16428447 + SAR_DM Satellite Satellite 434 1159 -313 9 680 3228 181 7 8 chrUextra 12576311 12577045 -16427611 - SAR_DM Satellite Satellite -468 1004 272 9 680 5932 30 1 1 chrUextra 12577983 12578719 -16425937 - MAX_I LTR Pao -4479 3435 2700 9 680 1889 119 48 44 chrUextra 12578821 12579328 -16425328 - Gypsy12_I LTR Gypsy -4605 941 366 9 680 1397 96 5 14 chrUextra 12579333 12579555 -16425101 - Gypsy12_LTR LTR Gypsy -71 2265 2046 9 680 34 24 0 0 chrUextra 12579695 12579736 -16424920 + AT_rich Low_complexity Low_complexity 1 41 0 9 680 6117 14 4 0 chrUextra 12580491 12581227 -16423429 - PROTOP DNA P -1156 3324 2586 9 680 1301 6 0 18 chrUextra 12581345 12581510 -16423146 - NTS_DM Other Other -78 162 1 9 680 1847 4 17 13 chrUextra 12581510 12581749 -16422907 - NTS_DM Other Other 0 240 1 9 680 1824 0 21 13 chrUextra 12581749 12581987 -16422669 - NTS_DM Other Other 0 240 1 9 680 467 0 66 40 chrUextra 12581987 12582063 -16422593 - NTS_DM Other Other 0 240 163 9 680 21 89 0 0 chrUextra 12582249 12582305 -16422351 + AT_rich Low_complexity Low_complexity 1 56 0 9 680 26 30 0 0 chrUextra 12582442 12582475 -16422181 + AT_rich Low_complexity Low_complexity 1 33 0 9 680 625 27 0 0 chrUextra 12582825 12582899 -16421757 - PROTOP_B DNA P 0 1153 1080 9 681 6002 3 0 0 chrUextra 12583022 12583735 -16420921 + LSU-rRNA_Dme rRNA rRNA 220 932 -2968 9 681 279 51 26 0 chrUextra 12583835 12583874 -16420782 + ARS406_DM Unknown Unknown 150 189 -164 9 681 1682 218 55 56 chrUextra 12583842 12584571 -16420085 - SAR_DM Satellite Satellite -625 727 1 9 681 5230 20 3 56 chrUextra 12584671 12585407 -16419249 + BATUMI_I LTR Pao 2492 3188 -4775 9 681 21 89 0 0 chrUextra 12585707 12585763 -16418893 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 4018 2 2 0 chrUextra 12585782 12586243 -16418413 - SSU-rRNA_Dme rRNA rRNA 0 1995 1534 9 681 2562 226 31 6 chrUextra 12586375 12587055 -16417601 - TAHRE LINE telomeric -9223 1240 544 9 681 49 43 0 0 chrUextra 12587270 12587340 -16417316 + AT_rich Low_complexity Low_complexity 1 70 0 9 681 298 172 203 79 chrUextra 12587458 12587635 -16417021 + DNAREP1_DM LINE Penelope 16 214 -380 9 681 805 171 67 16 chrUextra 12587619 12587834 -16416822 - DNAREP1_DM LINE Penelope -262 332 117 9 681 2393 4 0 0 chrUextra 12588015 12588295 -16416361 + BLASTOPIA_I LTR Gypsy 4202 4481 0 9 681 1982 16 8 12 chrUextra 12588295 12588552 -16416104 + BLASTOPIA_LTR LTR Gypsy 1 256 -19 9 681 1128 124 0 0 chrUextra 12588554 12588732 -16415924 + (CATA)n Simple_repeat Simple_repeat 3 180 0 9 681 6381 1 1 0 chrUextra 12588851 12589587 -16415069 + DOC LINE Jockey 3255 3991 -734 9 681 1295 86 134 0 chrUextra 12589687 12589896 -16414760 - Gypsy3_I LTR Gypsy -1807 4370 4134 9 681 3742 91 4 0 chrUextra 12589895 12590423 -16414233 - Gypsy3_I LTR Gypsy -2936 3241 2712 9 681 1944 201 16 20 chrUextra 12590525 12590978 -16413678 + Gypsy5_I LTR Gypsy 3447 3897 -2612 9 681 806 198 32 0 chrUextra 12590988 12591175 -16413481 + Gypsy5_I LTR Gypsy 4364 4556 -1953 9 681 229 125 0 89 chrUextra 12591180 12591259 -16413397 + GA-rich Low_complexity Low_complexity 6 77 0 9 681 919 49 0 0 chrUextra 12591372 12591516 -16413140 + PROTOP DNA P 680 823 -3657 9 681 4672 22 0 0 chrUextra 12591511 12592095 -16412561 + PROTOP DNA P 3802 4385 -95 9 681 3038 192 7 8 chrUextra 12592197 12592927 -16411729 - SAR_DM Satellite Satellite -549 923 195 9 681 6297 0 3 0 chrUextra 12593031 12593767 -16410889 + ROO_I LTR Pao 4915 5652 -2604 9 681 3029 185 11 12 chrUextra 12593867 12594602 -16410054 + SAR_DM Satellite Satellite 261 994 -478 9 681 2593 192 59 14 chrUextra 12594703 12595439 -16409217 + SAR_DM Satellite Satellite 1 769 -208 9 681 6388 3 0 0 chrUextra 12595539 12596275 -16408381 + R1_DM LINE R1 1859 2594 -2762 9 681 6351 3 1 1 chrUextra 12596375 12597111 -16407545 - SSU-rRNA_Dme rRNA rRNA -794 1201 466 9 681 5769 15 1 0 chrUextra 12597211 12597947 -16406709 - QUASIMODO_I LTR Gypsy -620 5440 4704 9 681 2752 40 3 0 chrUextra 12598047 12598396 -16406260 - DIVER_I LTR Pao -2011 3632 3283 9 681 2744 42 6 3 chrUextra 12598426 12598783 -16405873 - STALKER4_LTR LTR Gypsy -3 399 42 9 681 6304 3 1 0 chrUextra 12598883 12599619 -16405037 - ROO_I LTR Pao -2422 5834 5098 9 681 5910 9 0 0 chrUextra 12599719 12600412 -16404244 + R1_DM LINE R1 4664 5356 0 9 681 344 0 0 0 chrUextra 12600415 12600455 -16404201 + LSU-rRNA_Dme rRNA rRNA 2642 2681 -1219 9 681 4945 103 34 0 chrUextra 12600555 12601291 -16403365 - Gypsy12_I LTR Gypsy -2367 3179 2419 9 681 251 130 0 0 chrUextra 12601391 12601437 -16403219 - ARS406_DM Unknown Unknown -307 46 1 9 681 3281 158 16 16 chrUextra 12601397 12602126 -16402530 + SAR_DM Satellite Satellite 246 974 -498 9 681 5977 19 0 0 chrUextra 12602229 12602963 -16401693 + MDG1_I LTR Gypsy 5104 5837 -759 9 681 21 89 0 0 chrUextra 12605237 12605293 -16399363 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 1371 6 0 0 chrUextra 12605312 12605471 -16399185 - SSU-rRNA_Dme rRNA rRNA 0 1995 1837 9 681 6280 0 0 1 chrUextra 12605571 12606307 -16398349 + ROO_I LTR Pao 5635 6369 -1887 9 681 22 35 0 0 chrUextra 12606420 12606449 -16398207 + AT_rich Low_complexity Low_complexity 1 29 0 9 681 21 57 0 0 chrUextra 12606646 12606681 -16397975 + AT_rich Low_complexity Low_complexity 1 35 0 9 681 2025 0 0 0 chrUextra 12606681 12606921 -16397735 + ALUII_DM Unknown Unknown 1 240 0 9 681 3245 109 14 9 chrUextra 12607243 12607974 -16396682 - G2_DM LINE Jockey -2717 385 4 9 681 2243 0 0 8 chrUextra 12608079 12608347 -16396309 + DM297_LTR LTR Gypsy 149 414 0 9 681 3614 8 2 2 chrUextra 12608347 12608815 -16395841 + DM297_I LTR Gypsy 1 468 -5699 9 681 5071 70 37 7 chrUextra 12608915 12609651 -16395005 - QUASIMODO_I LTR Gypsy -4917 1143 386 9 681 5892 30 0 0 chrUextra 12610587 12611323 -16393333 + R1_DM LINE R1 2406 3141 -2215 9 681 525 152 37 67 chrUextra 12611423 12611557 -16393099 - Gypsy5_LTR LTR Gypsy -224 206 77 9 681 583 73 0 0 chrUextra 12611561 12611643 -16393013 - Jockey2 LINE Jockey -3346 82 1 9 681 1302 196 29 57 chrUextra 12611774 12612159 -16392497 - Gypsy_LTR LTR Gypsy -51 431 58 9 681 3452 184 8 9 chrUextra 12612259 12612995 -16391661 - SAR_DM Satellite Satellite -501 971 237 9 681 1229 126 5 45 chrUextra 12613253 12613477 -16391179 + Gypsy12_I LTR Gypsy 374 588 -4958 9 681 599 90 0 0 chrUextra 12613745 12613823 -16390833 + Gypsy12_I LTR Gypsy 812 889 -4657 9 681 549 0 0 0 chrUextra 12613931 12613990 -16390666 + LSU-rRNA_Dme rRNA rRNA 3842 3900 0 9 681 268 196 0 19 chrUextra 12614091 12614143 -16390513 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 681 268 196 0 19 chrUextra 12614183 12614235 -16390421 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 681 278 176 0 19 chrUextra 12614266 12614318 -16390338 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 681 22 56 0 0 chrUextra 12614331 12614367 -16390289 + AT_rich Low_complexity Low_complexity 1 36 0 9 681 936 9 0 27 chrUextra 12614393 12614505 -16390151 + NTS_DM Other Other 25 133 -107 9 681 1286 19 0 12 chrUextra 12614505 12614667 -16389989 + NTS_DM Other Other 38 197 -43 9 681 880 42 34 8 chrUextra 12614767 12614886 -16389770 - Gypsy12_I LTR Gypsy -5424 122 1 9 681 389 211 41 34 chrUextra 12614900 12615047 -16389609 - Gypsy12A_LTR LTR Gypsy -553 1727 1580 9 681 1323 183 88 24 chrUextra 12615101 12615431 -16389225 - Gypsy12_LTR LTR Gypsy -828 1508 1158 9 681 3380 184 12 10 chrUextra 12615603 12616335 -16388321 - SAR_DM Satellite Satellite -493 979 246 9 681 1080 21 7 7 chrUextra 12616439 12616584 -16388072 + NTS_DM Other Other 57 201 -39 9 681 936 9 0 27 chrUextra 12616636 12616748 -16387908 + NTS_DM Other Other 25 133 -107 9 681 1558 15 20 20 chrUextra 12616748 12616951 -16387705 + NTS_DM Other Other 38 240 0 9 681 1871 5 13 13 chrUextra 12616951 12617175 -16387481 + NTS_DM Other Other 1 224 -16 9 681 2179 0 0 4 chrUextra 12617277 12617526 -16387130 - LINEJ1_DM LINE Jockey -13 5007 4760 9 681 2978 115 1 4 chrUextra 12618250 12618700 -16385956 + Jockey2 LINE Jockey 1419 1820 -1608 9 681 514 43 570 0 chrUextra 12618688 12618845 -16385811 - PROTOP_B DNA P -297 856 610 9 681 5550 63 20 4 chrUextra 12618947 12619682 -16384974 + R1_DM LINE R1 108 854 -4502 9 681 729 200 6 19 chrUextra 12619815 12619973 -16384683 + HETRP_DM Satellite Satellite 1529 1684 -188 9 681 690 197 13 26 chrUextra 12620097 12620253 -16384403 + HETRP_DM Satellite Satellite 1529 1682 -190 9 681 703 193 7 14 chrUextra 12620374 12620516 -16384140 + HETRP_DM Satellite Satellite 1529 1669 -203 9 681 1832 19 5 0 chrUextra 12620619 12620827 -16383829 - TRANSPAC_I LTR Gypsy -4381 209 1 9 681 3075 3 0 0 chrUextra 12620827 12621157 -16383499 - TRANSPAC_LTR LTR Gypsy 0 330 1 9 681 685 12 0 36 chrUextra 12621157 12621240 -16383416 - NTS_DM Other Other -136 104 25 9 681 22 56 0 0 chrUextra 12621266 12621302 -16383354 + AT_rich Low_complexity Low_complexity 1 36 0 9 681 249 150 0 0 chrUextra 12621315 12621355 -16383301 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 681 6631 18 0 0 chrUextra 12621455 12622191 -16382465 - Gypsy4_I LTR Gypsy -2117 4171 3436 9 681 1323 7 0 0 chrUextra 12622291 12622440 -16382216 - MICROPIA_LTR LTR Gypsy -96 380 232 9 681 2059 9 0 0 chrUextra 12622469 12622695 -16381961 - MICROPIA_LTR LTR Gypsy -244 232 7 9 681 2070 29 270 12 chrUextra 12622690 12623027 -16381629 + R1_DM LINE R1 650 1073 -4283 9 681 6753 8 1 0 chrUextra 12623127 12623863 -16380793 + BS LINE Jockey 2342 3078 -2048 9 681 6472 22 0 0 chrUextra 12623963 12624699 -16379957 + MAX_I LTR Pao 4629 5364 -2550 9 681 2492 48 194 0 chrUextra 12624799 12625166 -16379490 - PROTOP DNA P -3554 926 489 9 681 393 163 607 7 chrUextra 12625383 12625535 -16379121 + TAHRE LINE telomeric 7309 7551 -2912 9 681 6260 26 7 1 chrUextra 12625635 12626371 -16378285 + R1_DM LINE R1 1485 2224 -3132 9 681 6481 5 0 0 chrUextra 12626472 12627207 -16377449 + ROVER-I_DM LTR Gypsy 1672 2406 -4178 9 681 5958 7 46 6 chrUextra 12627309 12628041 -16376615 - FB4_DM DNA Tc1 -127 3962 3201 9 681 2693 237 9 12 chrUextra 12628172 12628875 -16375781 - Gypsy6_I LTR Gypsy -1694 5318 4099 9 681 6212 26 0 12 chrUextra 12628979 12629715 -16374941 + FW_DM LINE Jockey 963 1689 -3003 9 681 607 284 16 16 chrUextra 12629838 12630085 -16374571 + TV1I LTR Gypsy 712 958 -5005 9 681 892 62 0 0 chrUextra 12631275 12631387 -16373269 + PROTOP_B DNA P 74 185 -968 9 681 21 89 0 0 chrUextra 12631866 12631922 -16372734 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 29 47 0 0 chrUextra 12631960 12632003 -16372653 + AT_rich Low_complexity Low_complexity 1 43 0 9 681 27 81 0 0 chrUextra 12632049 12632111 -16372545 + AT_rich Low_complexity Low_complexity 1 62 0 9 681 4579 83 76 7 chrUextra 12633159 12633893 -16370763 + Gypsy7_I LTR Gypsy 3187 4195 -1665 9 681 21 0 0 0 chrUextra 12635306 12635327 -16369329 + AT_rich Low_complexity Low_complexity 1 21 0 9 681 32 0 0 0 chrUextra 12636766 12636798 -16367858 + AT_rich Low_complexity Low_complexity 1 32 0 9 681 2832 7 3 0 chrUextra 12636930 12637239 -16367417 + SSU-rRNA_Dme rRNA rRNA 1 310 -1685 9 681 483 18 0 0 chrUextra 12637786 12637842 -16366814 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 681 3633 57 4 4 chrUextra 12638175 12638633 -16366023 - R1_DM LINE R1 -4898 458 1 9 681 2217 16 0 0 chrUextra 12638666 12638911 -16365745 - R1_DM LINE R1 0 5356 5112 9 681 2964 94 74 2 chrUextra 12639011 12639510 -16365146 + Gypsy12_I LTR Gypsy 5010 5544 -2 9 681 1237 167 13 26 chrUextra 12639513 12639746 -16364910 + Gypsy12_LTR LTR Gypsy 2 231 -2105 9 681 2273 196 15 5 chrUextra 12640683 12641419 -16363237 - SAR_DM Satellite Satellite -589 742 1 9 681 2143 107 0 6 chrUextra 12641519 12641847 -16362809 - R1_DM LINE R1 -4457 899 574 9 681 1055 108 29 29 chrUextra 12641848 12642020 -16362636 - R1_DM LINE R1 -5184 172 1 9 681 1572 71 0 32 chrUextra 12642038 12642255 -16362401 + Gypsy6A_LTR LTR Gypsy 71 280 -140 9 681 1467 0 0 0 chrUextra 12642355 12642518 -16362138 + (TAGA)n Simple_repeat Simple_repeat 1 163 0 9 681 2702 93 6 33 chrUextra 12643203 12643682 -16360974 - DMSAT6 Satellite Satellite 0 470 5 9 681 2691 141 12 68 chrUextra 12643698 12644760 -16359896 - DMSAT6 Satellite Satellite 0 1002 1 9 681 2495 0 0 0 chrUextra 12644863 12645130 -16359526 - FW_DM LINE Jockey -4425 267 1 9 681 2168 179 9 11 chrUextra 12645137 12645599 -16359057 - SAR_DM Satellite Satellite -568 904 444 9 681 3326 202 14 24 chrUextra 12645701 12646433 -16358223 + SAR_DM Satellite Satellite 1 724 -221 9 681 6264 25 7 1 chrUextra 12646535 12647271 -16357385 - R1_DM LINE R1 -1403 3953 3214 9 681 3462 172 14 11 chrUextra 12647374 12648097 -16356559 + SAR_DM Satellite Satellite 352 1076 -396 9 681 1558 15 24 19 chrUextra 12648207 12648413 -16356243 + NTS_DM Other Other 34 240 0 9 681 1696 20 0 5 chrUextra 12648413 12648615 -16356041 + NTS_DM Other Other 1 201 -39 9 681 908 18 0 27 chrUextra 12648667 12648779 -16355877 + NTS_DM Other Other 25 133 -107 9 681 1330 25 0 6 chrUextra 12648779 12648943 -16355713 + NTS_DM Other Other 38 200 -40 9 681 6445 18 0 1 chrUextra 12649043 12649779 -16354877 + FW_DM LINE Jockey 267 1001 -3691 9 681 1865 17 17 17 chrUextra 12649879 12650116 -16354540 + NTS_DM Other Other 4 240 0 9 681 1194 15 0 0 chrUextra 12650116 12650249 -16354407 + NTS_DM Other Other 1 133 -107 9 681 1350 18 0 6 chrUextra 12650249 12650414 -16354242 + NTS_DM Other Other 38 201 -39 9 681 936 9 0 27 chrUextra 12650467 12650579 -16354077 + NTS_DM Other Other 25 133 -107 9 681 339 0 0 0 chrUextra 12650579 12650615 -16354041 + NTS_DM Other Other 38 73 -167 9 681 6658 4 38 0 chrUextra 12650715 12651451 -16353205 - CIRCE LINE Composite -5525 831 68 9 681 6648 4 0 0 chrUextra 12652387 12653123 -16351533 + R1_DM LINE R1 2416 3151 -2205 9 681 2296 8 0 0 chrUextra 12653223 12653471 -16351185 + DMLTR5 LTR Gypsy 19 266 0 9 681 4466 0 0 0 chrUextra 12653470 12653959 -16350697 + HMSBEAGLE_I LTR Gypsy 1 489 -6040 9 681 3072 197 15 23 chrUextra 12654062 12654795 -16349861 - SAR_DM Satellite Satellite -300 1172 446 9 681 6293 12 8 4 chrUextra 12654895 12655631 -16349025 + BLOOD_I LTR Gypsy 4813 5551 -1062 9 681 1620 0 0 0 chrUextra 12656283 12656463 -16348193 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 9 681 329 324 16 60 chrUextra 12656579 12656900 -16347756 + BURDOCK_I LTR Gypsy 851 992 -4868 9 681 2847 203 9 10 chrUextra 12657406 12658139 -16346517 - SAR_DM Satellite Satellite -281 1191 192 9 681 3561 159 16 23 chrUextra 12658240 12658975 -16345681 + SAR_DM Satellite Satellite 378 1107 -365 9 681 6643 15 1 0 chrUextra 12659075 12659811 -16344845 + Invader1_I LTR Gypsy 291 1027 -2159 9 681 1134 0 0 0 chrUextra 12659911 12660037 -16344619 + (TTGTG)n Simple_repeat Simple_repeat 2 127 0 9 681 3646 2 0 2 chrUextra 12660037 12660437 -16344219 + STALKER4_LTR LTR Gypsy 4 402 0 9 681 1534 0 0 57 chrUextra 12660437 12660647 -16344009 + STALKER4_I LTR Gypsy 1 198 -6332 9 681 850 10 0 29 chrUextra 12660747 12660849 -16343807 - NTS_DM Other Other -117 123 25 9 681 1350 18 0 6 chrUextra 12660901 12661066 -16343590 - NTS_DM Other Other -39 201 38 9 681 917 18 0 27 chrUextra 12661066 12661178 -16343478 - NTS_DM Other Other -107 133 25 9 681 22 56 0 0 chrUextra 12661205 12661241 -16343415 + AT_rich Low_complexity Low_complexity 1 36 0 9 681 278 176 0 19 chrUextra 12661254 12661306 -16343350 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 681 268 196 0 19 chrUextra 12661337 12661389 -16343267 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 681 268 196 0 19 chrUextra 12661429 12661481 -16343175 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 681 2796 7 3 0 chrUextra 12661583 12661890 -16342766 + LSU-rRNA_Dme rRNA rRNA 2048 2355 -1545 9 681 3890 5 0 2 chrUextra 12661887 12662319 -16342337 + R2_DM LINE R2 561 991 -2616 9 681 6281 22 38 1 chrUextra 12662419 12663155 -16341501 + R1_DM LINE R1 4425 5187 -169 9 681 6482 19 0 0 chrUextra 12663256 12663991 -16340665 + FW_DM LINE Jockey 2385 3119 -1573 9 681 32 57 0 0 chrUextra 12664297 12664350 -16340306 + AT_rich Low_complexity Low_complexity 1 53 0 9 681 2930 37 5 45 chrUextra 12665263 12665663 -16338993 + CIRCE LINE Composite 4981 5364 -992 9 681 765 328 50 32 chrUextra 12665863 12666367 -16338289 + GTWIN_I LTR Gypsy 2320 2832 -3589 9 681 1407 36 68 0 chrUextra 12666307 12666499 -16338157 + TLD2 Unknown Unknown 1 205 -13 9 681 1063 0 0 0 chrUextra 12666599 12666716 -16337940 + Gypsy4_I LTR Gypsy 6172 6288 0 9 681 2313 45 3 37 chrUextra 12666716 12667013 -16337643 + Gypsy4_LTR LTR Gypsy 1 287 0 9 681 253 207 44 33 chrUextra 12667035 12667125 -16337531 + TIRANT_LTR LTR Gypsy 233 323 -94 9 681 550 230 0 0 chrUextra 12667141 12667267 -16337389 + Gypsy_I LTR Gypsy 6094 6219 -288 9 681 250 233 17 0 chrUextra 12667269 12667329 -16337327 + Gypsy_LTR LTR Gypsy 33 93 -389 9 681 1289 0 7 0 chrUextra 12667435 12667587 -16337069 + MDG3_LTR LTR Gypsy 115 267 0 9 681 5063 0 0 0 chrUextra 12667586 12668171 -16336485 + MDG3_I LTR Gypsy 1 585 -4401 9 681 2393 38 25 12 chrUextra 12668271 12668592 -16336064 + R1_DM LINE R1 1913 2237 -3119 9 681 611 42 221 0 chrUextra 12668674 12668769 -16335887 - Gypsy6A_LTR LTR Gypsy -234 186 71 9 681 1120 113 73 32 chrUextra 12668787 12669007 -16335649 + R1_DM LINE R1 1 229 -5127 9 681 5783 14 3 10 chrUextra 12669107 12669831 -16334825 - STALKER4_I LTR Gypsy -5215 1315 597 9 681 1008 77 0 0 chrUextra 12669943 12670099 -16334557 + (CAAGA)n Simple_repeat Simple_repeat 5 160 0 9 681 1371 39 0 0 chrUextra 12670099 12670276 -16334380 + (ACATG)n Simple_repeat Simple_repeat 3 180 0 9 681 995 36 65 62 chrUextra 12670276 12670600 -16334056 + (CAAGA)n Simple_repeat Simple_repeat 1 324 0 9 681 570 15 0 0 chrUextra 12670600 12670667 -16333989 + (CACGA)n Simple_repeat Simple_repeat 1 67 0 9 681 1823 178 1 12 chrUextra 12670779 12671183 -16333473 - STALKER4_I LTR Gypsy -6713 689 235 9 681 25 0 0 0 chrUextra 12671207 12671232 -16333424 + AT_rich Low_complexity Low_complexity 1 25 0 9 681 871 86 14 48 chrUextra 12671352 12671499 -16333157 - STALKER4_LTR LTR Gypsy -23 379 238 9 681 6354 0 1 0 chrUextra 12671614 12672348 -16332308 + DMRT1B LINE R1 3560 4294 -889 9 681 6299 5 0 0 chrUextra 12672448 12673183 -16331473 + FW_DM LINE Jockey 2981 3715 -977 9 681 2543 200 25 20 chrUextra 12673283 12674018 -16330638 - ROVER-I_DM LTR Gypsy -2602 3982 2929 9 681 488 119 36 0 chrUextra 12675032 12675116 -16329540 + NTS_DM Other Other 4 90 -150 9 681 28 48 0 0 chrUextra 12675389 12675431 -16329225 + AT_rich Low_complexity Low_complexity 1 42 0 9 681 1898 178 11 8 chrUextra 12675788 12676523 -16328133 + SAR_DM Satellite Satellite 1 736 -679 9 681 6193 0 1 3 chrUextra 12676623 12677358 -16327298 - R1_DM LINE R1 -3691 1665 932 9 681 22 35 0 0 chrUextra 12677520 12677549 -16327107 + AT_rich Low_complexity Low_complexity 1 29 0 9 681 37 39 0 0 chrUextra 12677650 12677701 -16326955 + AT_rich Low_complexity Low_complexity 1 51 0 9 681 28 48 0 0 chrUextra 12678057 12678099 -16326557 + AT_rich Low_complexity Low_complexity 1 42 0 9 681 6180 9 1 0 chrUextra 12678293 12679028 -16325628 + DOC2_DM LINE Jockey 2928 3663 -1130 9 681 2729 180 28 10 chrUextra 12679128 12679863 -16324793 - SAR_DM Satellite Satellite -267 1205 195 9 681 2828 201 7 8 chrUextra 12680801 12681508 -16323148 + SAR_DM Satellite Satellite 224 929 -543 9 681 1023 43 7 0 chrUextra 12681393 12681532 -16323124 - ARS406_DM Unknown Unknown -164 189 50 9 681 491 208 8 16 chrUextra 12681799 12681921 -16322735 - HETRP_DM Satellite Satellite -203 1669 1549 9 681 185 0 0 39 chrUextra 12681921 12681947 -16322709 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 681 286 194 15 15 chrUextra 12682078 12682146 -16322510 - HETRP_DM Satellite Satellite -203 1669 1602 9 681 1894 9 0 0 chrUextra 12682145 12682368 -16322288 + G6_DM LINE Jockey 1 223 -1819 9 681 5451 62 1 5 chrUextra 12682468 12683203 -16321453 - BATUMI_I LTR Pao -3883 4080 3349 9 681 22 88 0 0 chrUextra 12683818 12683875 -16320781 + AT_rich Low_complexity Low_complexity 1 57 0 9 681 1219 0 0 7 chrUextra 12683894 12684038 -16320618 - SSU-rRNA_Dme rRNA rRNA 0 1995 1853 9 681 2963 187 16 26 chrUextra 12684138 12684872 -16319784 + SAR_DM Satellite Satellite 1 726 -208 9 681 1380 6 0 24 chrUextra 12684973 12685142 -16319514 + ACCORD2_LTR LTR Gypsy 51 215 0 9 681 1229 7 0 0 chrUextra 12685142 12685284 -16319372 - DIVER2_LTR LTR Pao -243 142 1 9 681 1872 52 0 92 chrUextra 12685284 12685578 -16319078 - CIRCE LINE Composite -5115 1241 975 9 681 1675 205 47 14 chrUextra 12685813 12686526 -16318130 + SAR_DM Satellite Satellite 1 736 -216 9 681 6306 3 1 0 chrUextra 12686645 12687378 -16317278 - R1_DM LINE R1 -2942 2414 1681 9 681 244 128 0 21 chrUextra 12687592 12687640 -16317016 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 681 5976 15 5 0 chrUextra 12688313 12689048 -16315608 - FW_DM LINE Jockey -1277 3415 2677 9 681 2874 179 16 19 chrUextra 12689148 12689883 -16314773 + SAR_DM Satellite Satellite 1 732 -281 9 681 6424 0 3 0 chrUextra 12689983 12690718 -16313938 - LSU-rRNA_Dme rRNA rRNA -175 3725 2989 9 681 3236 176 11 9 chrUextra 12690818 12691553 -16313103 - SAR_DM Satellite Satellite -484 988 253 9 681 2426 93 34 8 chrUextra 12691654 12692388 -16312268 - DMSAT6 Satellite Satellite -151 753 1 9 681 297 0 0 0 chrUextra 12693190 12693223 -16311433 + (TTCTC)n Simple_repeat Simple_repeat 4 36 0 9 681 1070 19 24 24 chrUextra 12693323 12693489 -16311167 + NTS_DM Other Other 75 240 0 9 681 1734 21 17 17 chrUextra 12693489 12693729 -16310927 + NTS_DM Other Other 1 240 0 9 681 1820 4 17 17 chrUextra 12693729 12693969 -16310687 + NTS_DM Other Other 1 240 0 9 681 695 23 0 11 chrUextra 12693969 12694058 -16310598 + NTS_DM Other Other 1 88 -152 9 681 21 89 0 0 chrUextra 12696263 12696319 -16308337 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 1948 0 0 4 chrUextra 12696338 12696563 -16308093 - SSU-rRNA_Dme rRNA rRNA 0 1995 1772 9 681 5739 37 1 0 chrUextra 12697498 12698233 -16306423 + MDG1_I LTR Gypsy 3098 3833 -2763 9 681 516 200 0 0 chrUextra 12698922 12699067 -16305589 + T-rich Low_complexity Low_complexity 2 146 0 9 681 4726 0 0 42 chrUextra 12699307 12699903 -16304753 + LSU-rRNA_Dme rRNA rRNA 1 571 -3329 9 681 4176 108 63 27 chrUextra 12700007 12700738 -16303918 + TART LINE telomeric 9695 10451 -4026 9 681 5687 36 1 9 chrUextra 12700838 12701572 -16303084 - R1_DM LINE R1 -3897 1459 732 9 681 6149 14 1 1 chrUextra 12701673 12702406 -16302250 + R1_DM LINE R1 3929 4661 -695 9 681 3445 78 47 7 chrUextra 12702508 12703155 -16301501 - G2_DM LINE Jockey -2666 436 4 9 681 32 0 0 0 chrUextra 12703183 12703215 -16301441 + AT_rich Low_complexity Low_complexity 1 32 0 9 681 1453 0 0 21 chrUextra 12703343 12703536 -16301120 + STALKER4_I LTR Gypsy 6342 6530 0 9 681 3465 0 0 2 chrUextra 12703536 12703939 -16300717 + STALKER4_LTR LTR Gypsy 1 402 0 9 681 642 12 72 0 chrUextra 12703970 12704053 -16300603 + STALKER4_I LTR Gypsy 2229 2317 -4213 9 681 202 148 48 16 chrUextra 12704238 12704300 -16300356 + (TTA)n Simple_repeat Simple_repeat 2 65 0 9 681 22 35 0 0 chrUextra 12704588 12704617 -16300039 + AT_rich Low_complexity Low_complexity 1 29 0 9 681 206 194 32 0 chrUextra 12704811 12704873 -16299783 + (TTA)n Simple_repeat Simple_repeat 2 65 0 9 681 5894 37 0 7 chrUextra 12705013 12705748 -16298908 - BATUMI_I LTR Pao -1750 6213 5484 9 681 6101 3 0 0 chrUextra 12705848 12706583 -16298073 - DM297_I LTR Gypsy -473 5694 4960 9 681 2898 63 5 17 chrUextra 12706953 12707359 -16297297 - Baggins1 LINE LOA -262 5191 4791 9 681 1668 18 17 17 chrUextra 12707518 12707748 -16296908 - NTS_DM Other Other -10 230 1 9 681 1744 21 17 17 chrUextra 12707748 12707988 -16296668 - NTS_DM Other Other 0 240 1 9 681 1730 13 21 17 chrUextra 12707988 12708227 -16296429 - NTS_DM Other Other 0 240 1 9 681 2951 188 18 27 chrUextra 12708353 12709085 -16295571 + SAR_DM Satellite Satellite 1 725 -208 9 681 908 63 5 18 chrUextra 12709188 12709567 -16295089 - RSP Satellite Satellite -89 374 1 9 681 2488 58 3 3 chrUextra 12709594 12709923 -16294733 + G5_DM LINE Jockey 4 332 -4524 9 681 6033 18 1 1 chrUextra 12710023 12710758 -16293898 - R1_DM LINE R1 -1084 4272 3538 9 681 5121 57 52 15 chrUextra 12710858 12711593 -16293063 - R1_DM LINE R1 -4471 885 124 9 681 870 9 0 27 chrUextra 12711741 12711853 -16292803 + NTS_DM Other Other 25 133 -107 9 681 1252 18 0 6 chrUextra 12711853 12712018 -16292638 + NTS_DM Other Other 38 201 -39 9 681 870 9 0 27 chrUextra 12712070 12712182 -16292474 + NTS_DM Other Other 25 133 -107 9 681 1438 15 20 20 chrUextra 12712182 12712385 -16292271 + NTS_DM Other Other 38 240 0 9 681 331 47 0 0 chrUextra 12712385 12712428 -16292228 + NTS_DM Other Other 1 43 -197 9 681 1759 5 18 13 chrUextra 12712528 12712757 -16291899 - NTS_DM Other Other -10 230 1 9 681 1861 0 17 13 chrUextra 12712757 12712996 -16291660 - NTS_DM Other Other 0 240 1 9 681 1843 4 17 13 chrUextra 12712996 12713235 -16291421 - NTS_DM Other Other 0 240 1 9 85 6376 3 0 0 chrUextra 12713363 12714098 -16290558 - FW_DM LINE Jockey -431 4261 3527 9 682 28 0 0 0 chrUextra 12714265 12714293 -16290363 + AT_rich Low_complexity Low_complexity 1 28 0 9 682 34 24 0 0 chrUextra 12715378 12715419 -16289237 + AT_rich Low_complexity Low_complexity 1 41 0 9 682 21 95 0 0 chrUextra 12715632 12715695 -16288961 + AT_rich Low_complexity Low_complexity 1 63 0 9 682 467 17 0 16 chrUextra 12715707 12715768 -16288888 + LSU-rRNA_Dme rRNA rRNA 1 60 -3840 9 682 564 15 0 0 chrUextra 12715868 12715936 -16288720 - NTS_DM Other Other -135 105 38 9 682 817 0 0 0 chrUextra 12715936 12716032 -16288624 - NTS_DM Other Other -107 133 38 9 682 832 9 9 27 chrUextra 12716032 12716143 -16288513 - NTS_DM Other Other -107 133 25 9 682 21 57 0 0 chrUextra 12716169 12716204 -16288452 + AT_rich Low_complexity Low_complexity 1 35 0 9 682 1252 18 0 6 chrUextra 12716204 12716369 -16288287 - NTS_DM Other Other -39 201 38 9 682 855 18 0 34 chrUextra 12716369 12716487 -16288169 - NTS_DM Other Other -107 133 20 9 682 433 30 0 15 chrUextra 12716534 12716601 -16288055 - NTS_DM Other Other -39 201 136 9 682 4967 42 19 52 chrUextra 12716703 12717438 -16287218 + BATUMI_I LTR Pao 2310 3020 -4943 9 682 3568 45 47 2 chrUextra 12717554 12718044 -16286612 - PROTOP DNA P -3968 512 1 9 682 292 157 83 21 chrUextra 12718162 12718273 -16286383 - TART LINE telomeric -3988 10489 10404 9 682 3048 182 18 25 chrUextra 12719208 12719943 -16284713 - SAR_DM Satellite Satellite -611 729 1 9 682 6398 0 1 1 chrUextra 12720043 12720778 -16283878 + LSU-rRNA_Dme rRNA rRNA 2480 3214 -686 9 682 3251 97 2 2 chrUextra 12720878 12721384 -16283272 + S_DM DNA Tc1 1231 1736 0 9 682 5421 25 1 37 chrUextra 12721713 12722448 -16282208 + DOC2_DM LINE Jockey 319 1027 -3766 9 682 1749 169 95 32 chrUextra 12722559 12723283 -16281373 + SAR_DM Satellite Satellite 1 769 -678 9 682 5892 34 5 1 chrUextra 12723383 12724118 -16280538 + CIRCE LINE Composite 2760 3497 -2859 9 682 6239 4 1 1 chrUextra 12725053 12725788 -16278868 - R1_DM LINE R1 -1011 4345 3611 9 682 455 107 0 0 chrUextra 12725888 12725963 -16278693 - ARS406_DM Unknown Unknown -278 75 1 9 682 3062 188 7 6 chrUextra 12725901 12726614 -16278042 + SAR_DM Satellite Satellite 224 937 -535 9 682 1540 27 0 0 chrUextra 12726723 12726910 -16277746 - QUASIMODO_I LTR Gypsy -5873 187 1 9 682 4400 6 82 0 chrUextra 12726910 12727458 -16277198 - QUASIMODO_LTR LTR Gypsy 0 658 66 9 682 3842 23 39 0 chrUextra 12727558 12728041 -16276615 - FW_DM LINE Jockey -1071 3621 3120 9 682 24 77 0 0 chrUextra 12728393 12728445 -16276211 + AT_rich Low_complexity Low_complexity 1 52 0 9 682 1950 12 78 0 chrUextra 12729228 12729485 -16275171 - IDEFIX_LTR LTR Gypsy -317 277 1 9 682 256 100 0 0 chrUextra 12729453 12729493 -16275163 + BARI1 DNA Tc1 3 42 -1708 9 682 2082 56 24 113 chrUextra 12729502 12729963 -16274693 + BATUMI_I LTR Pao 603 1022 -6941 9 682 1698 35 35 11 chrUextra 12730063 12730323 -16274333 + Invader2_I LTR Gypsy 4327 4592 0 9 682 2209 26 0 0 chrUextra 12730323 12730589 -16274067 + Invader2_LTR LTR Gypsy 1 266 0 9 682 368 156 41 20 chrUextra 12730595 12730693 -16273963 + Gypsy12A_LTR LTR Gypsy 1634 1733 -547 9 682 728 76 0 0 chrUextra 12730693 12730798 -16273858 + Baggins1 LINE LOA 1 105 -5348 9 682 1870 9 0 0 chrUextra 12730898 12731117 -16273539 - MAX_LTR LTR Pao -102 219 1 9 682 4289 2 0 4 chrUextra 12731117 12731633 -16273023 - MAX_I LTR Pao 0 7914 7401 9 682 5875 27 22 0 chrUextra 12731733 12732468 -16272188 + R1_DM LINE R1 2809 3559 -1797 9 682 2953 182 25 11 chrUextra 12732570 12733298 -16271358 - SAR_DM Satellite Satellite -511 961 224 9 682 2261 61 13 0 chrUextra 12733425 12733738 -16270918 - PROTOP_B DNA P -43 1110 794 9 682 286 50 0 0 chrUextra 12733743 12733803 -16270853 - PROTOP_B DNA P -522 631 572 9 682 1110 32 225 52 chrUextra 12733796 12734138 -16270518 - PROTOP_B DNA P -217 936 536 9 682 4657 0 0 0 chrUextra 12734238 12734779 -16269877 + FW_DM LINE Jockey 4152 4692 0 9 682 1532 5 37 5 chrUextra 12734782 12734973 -16269683 + Gypsy4_I LTR Gypsy 3669 3865 -2423 9 682 5804 35 7 11 chrUextra 12735073 12735807 -16268849 - BS2 LINE Jockey -948 3773 3043 9 682 4657 2 4 0 chrUextra 12735908 12736454 -16268202 - QUASIMODO_LTR LTR Gypsy -110 548 1 9 682 748 112 0 0 chrUextra 12736479 12736613 -16268043 - S_DM DNA Tc1 0 1736 1603 9 682 6483 0 0 0 chrUextra 12736743 12737478 -16267178 - R2_DM LINE R2 -960 2647 1913 9 682 6266 5 0 0 chrUextra 12737578 12738313 -16266343 + DMRT1B LINE R1 1184 1918 -3265 9 682 753 0 20 10 chrUextra 12738413 12738514 -16266142 + ROO_LTR LTR Pao 327 428 0 9 682 3051 145 117 35 chrUextra 12738514 12739148 -16265508 - Gypsy3_I LTR Gypsy -1233 4944 4259 9 682 5394 51 1 8 chrUextra 12739248 12739983 -16264673 + R1_DM LINE R1 418 1147 -4209 9 682 5784 15 4 12 chrUextra 12740090 12740818 -16263838 + IVK_DM LINE I 1314 2035 -3367 9 682 6044 14 0 0 chrUextra 12740918 12741653 -16263003 - TART LINE telomeric -5323 9154 8420 9 682 6244 1 0 1 chrUextra 12741753 12742488 -16262168 + IVK_DM LINE I 2553 3286 -2116 9 682 5881 4 11 11 chrUextra 12742589 12743323 -16261333 + MDG1_I LTR Gypsy 252 985 -5611 9 682 5966 26 4 0 chrUextra 12743423 12744158 -16260498 - R1_DM LINE R1 -2051 3305 2568 9 682 6305 3 0 1 chrUextra 12744258 12744993 -16259663 - R1_DM LINE R1 -3291 2065 1332 9 682 2984 24 8 8 chrUextra 12745093 12745478 -16259178 - BATUMI_I LTR Pao -1152 6811 6427 9 682 2587 18 0 3 chrUextra 12745501 12745828 -16258828 + BATUMI_I LTR Pao 7303 7628 -335 9 682 2452 3 7 0 chrUextra 12745928 12746216 -16258440 + Invader1_LTR LTR Gypsy 134 423 0 9 682 1442 6 0 0 chrUextra 12746216 12746386 -16258270 + Copia2_LTR_DM LTR Copia 29 198 0 9 682 1352 43 19 28 chrUextra 12746763 12746978 -16257678 + NTS_DM Other Other 28 240 0 9 682 1625 42 17 17 chrUextra 12746978 12747217 -16257439 + NTS_DM Other Other 1 239 -1 9 682 1560 59 17 17 chrUextra 12747218 12747458 -16257198 + NTS_DM Other Other 1 240 0 9 682 332 25 0 0 chrUextra 12747458 12747498 -16257158 + NTS_DM Other Other 1 40 -200 9 682 6129 1 0 0 chrUextra 12747598 12748298 -16256358 + LSU-rRNA_Dme rRNA rRNA 1948 2647 -1253 9 682 279 0 0 26 chrUextra 12748295 12748333 -16256323 + R1_DM LINE R1 4921 4957 -399 9 682 34 24 0 0 chrUextra 12748808 12748849 -16255807 + AT_rich Low_complexity Low_complexity 1 41 0 9 682 21 95 0 0 chrUextra 12749062 12749125 -16255531 + AT_rich Low_complexity Low_complexity 1 63 0 9 682 268 0 0 0 chrUextra 12749136 12749168 -16255488 + LSU-rRNA_Dme rRNA rRNA 1 32 -3868 9 682 3544 0 0 57 chrUextra 12749268 12749726 -16254930 - LSU-rRNA_Dme rRNA rRNA -3468 432 1 9 682 21 95 0 0 chrUextra 12749738 12749801 -16254855 + AT_rich Low_complexity Low_complexity 1 63 0 9 682 4564 0 0 0 chrUextra 12750103 12750627 -16254029 - Copia_I LTR Copia -4069 524 1 9 682 1701 0 5 5 chrUextra 12750627 12750838 -16253818 - Copia_LTR LTR Copia 0 276 66 9 682 3939 39 107 0 chrUextra 12751101 12751673 -16252983 + PROTOP DNA P 1 633 -3847 9 682 436 0 0 0 chrUextra 12752137 12752187 -16252469 - CIRCE LINE Composite -1376 4980 4931 9 682 2624 28 3 0 chrUextra 12752187 12752508 -16252148 + R1_DM LINE R1 2277 2598 -2758 9 682 2162 128 14 12 chrUextra 12752608 12753343 -16251313 - DMSAT6 Satellite Satellite -230 736 1 9 682 5756 41 9 0 chrUextra 12754278 12755013 -16249643 - DMCR1A LINE CR1 -1534 2936 2195 9 682 3541 38 130 10 chrUextra 12755113 12755711 -16248945 - BLOOD_I LTR Gypsy -5943 670 1 9 682 5149 31 56 0 chrUextra 12755987 12756683 -16247973 + FW_DM LINE Jockey 1 735 -3957 9 682 2413 193 70 13 chrUextra 12756783 12757514 -16247142 + SAR_DM Satellite Satellite 1 772 -242 9 682 701 93 0 0 chrUextra 12757618 12757726 -16246930 - ARS406_DM Unknown Unknown -245 108 1 9 682 3057 174 13 16 chrUextra 12757633 12758344 -16246312 + SAR_DM Satellite Satellite 195 903 -569 9 682 6261 7 0 0 chrUextra 12758453 12759188 -16245468 - IDEFIX_I LTR Gypsy -3839 1789 1055 9 682 4587 112 1 0 chrUextra 12760190 12760858 -16243798 + HMSBEAGLE_I LTR Gypsy 1212 1880 -4649 9 682 229 155 51 17 chrUextra 12761024 12761083 -16243573 + (TA)n Simple_repeat Simple_repeat 2 62 0 9 682 1454 6 0 0 chrUextra 12761215 12761385 -16243271 - Copia2_LTR_DM LTR Copia 0 198 29 9 682 2430 7 78 0 chrUextra 12761385 12761693 -16242963 - Invader1_LTR LTR Gypsy 0 423 92 9 682 870 9 0 27 chrUextra 12761835 12761947 -16242709 + NTS_DM Other Other 25 133 -107 9 682 1252 18 0 6 chrUextra 12761947 12762112 -16242544 + NTS_DM Other Other 38 201 -39 9 682 852 18 0 27 chrUextra 12762164 12762276 -16242380 + NTS_DM Other Other 25 133 -107 9 682 1252 18 0 6 chrUextra 12762276 12762441 -16242215 + NTS_DM Other Other 38 201 -39 9 682 21 57 0 0 chrUextra 12762441 12762476 -16242180 + AT_rich Low_complexity Low_complexity 1 35 0 9 682 6322 1 1 1 chrUextra 12762628 12763363 -16241293 + STALKER4_I LTR Gypsy 3992 4726 -1804 9 682 3209 177 12 7 chrUextra 12763474 12764198 -16240458 - SAR_DM Satellite Satellite -411 1061 334 9 682 5206 53 2 5 chrUextra 12764298 12765033 -16239623 + Gypsy2_I LTR Gypsy 1713 3043 -3969 9 682 6285 7 0 1 chrUextra 12765133 12765868 -16238788 + Gypsy4_I LTR Gypsy 1008 1741 -4547 9 682 6251 10 0 0 chrUextra 12765968 12766700 -16237956 + Gypsy4_I LTR Gypsy 3992 4723 -1565 9 682 6130 4 3 3 chrUextra 12766803 12767538 -16237118 - R1_DM LINE R1 -1199 4157 3423 9 682 3164 160 18 17 chrUextra 12767641 12768352 -16236304 - SAR_DM Satellite Satellite -435 1037 326 9 682 1795 280 31 29 chrUextra 12769308 12770040 -16234616 + ROVER-I_DM LTR Gypsy 1043 1776 -4808 9 682 1675 9 18 14 chrUextra 12770143 12770366 -16234290 + NTS_DM Other Other 17 240 0 9 682 1850 4 17 13 chrUextra 12770366 12770605 -16234051 + NTS_DM Other Other 1 240 0 9 682 1809 4 17 17 chrUextra 12770605 12770845 -16233811 + NTS_DM Other Other 1 240 0 9 682 288 0 0 0 chrUextra 12770845 12770878 -16233778 + NTS_DM Other Other 1 33 -207 9 682 345 0 0 22 chrUextra 12770978 12771023 -16233633 + LSU-rRNA_Dme rRNA rRNA 1745 1788 -2112 9 682 5597 1 0 1 chrUextra 12771067 12771713 -16232943 + LSU-rRNA_Dme rRNA rRNA 1788 2432 -1468 9 682 2799 179 13 19 chrUextra 12771813 12772431 -16232225 + SAR_DM Satellite Satellite 435 1047 -425 9 682 221 0 35 0 chrUextra 12772431 12772460 -16232196 + (TTA)n Simple_repeat Simple_repeat 2 31 0 9 682 2799 179 13 19 chrUextra 12772460 12772530 -16232126 + SAR_DM Satellite Satellite 1048 1119 -353 9 682 285 179 34 45 chrUextra 12772530 12772548 -16232108 - XDMR_DM Unknown Unknown -16 344 258 9 682 5536 27 1 3 chrUextra 12772648 12773383 -16231273 - IDEFIX_I LTR Gypsy -118 5510 4777 9 682 21 89 0 0 chrUextra 12773997 12774053 -16230603 + AT_rich Low_complexity Low_complexity 1 56 0 9 682 1229 14 0 0 chrUextra 12774072 12774218 -16230438 - SSU-rRNA_Dme rRNA rRNA 0 1995 1850 9 682 4567 50 41 0 chrUextra 12774376 12775053 -16229603 + PROTOP DNA P 74 753 -3727 9 682 5865 0 4 0 chrUextra 12775153 12775888 -16228768 + DM412 LTR Gypsy 1164 1901 -4996 9 682 22 56 0 0 chrUextra 12775994 12776030 -16228626 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 2312 156 32 12 chrUextra 12776184 12776722 -16227934 + TART LINE telomeric 8952 9435 -5042 9 682 1654 222 0 3 chrUextra 12776824 12777163 -16227493 + GTWIN_I LTR Gypsy 6084 6421 0 9 682 633 240 156 46 chrUextra 12777203 12777531 -16227125 + GTWIN_LTR LTR Gypsy 42 405 -90 9 682 1510 12 0 0 chrUextra 12777658 12777825 -16226831 + R1_DM LINE R1 4415 4581 -775 9 682 1904 8 17 13 chrUextra 12777875 12778114 -16226542 + NTS_DM Other Other 1 240 0 9 682 1930 4 17 13 chrUextra 12778114 12778353 -16226303 + NTS_DM Other Other 1 240 0 9 682 348 25 0 0 chrUextra 12778353 12778393 -16226263 + NTS_DM Other Other 1 40 -200 9 682 5366 51 1 25 chrUextra 12778508 12779228 -16225428 + Gypsy7_I LTR Gypsy 1 703 -4281 9 682 262 150 0 0 chrUextra 12779373 12779413 -16225243 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12779465 12779505 -16225151 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12779557 12779597 -16225059 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 22 56 0 0 chrUextra 12779602 12779638 -16225018 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 3178 3 3 0 chrUextra 12779710 12780063 -16224593 - LSU-rRNA_Dme rRNA rRNA 0 3900 3547 9 682 4622 35 2 37 chrUextra 12780165 12780781 -16223875 + IDEFIX_LTR LTR Gypsy 1 594 0 9 682 6135 22 4 1 chrUextra 12780998 12781733 -16222923 + STALKER4_I LTR Gypsy 1858 2594 -3936 9 682 6620 1 1 1 chrUextra 12781833 12782568 -16222088 + LSU-rRNA_Dme rRNA rRNA 2235 2969 -931 9 682 549 15 15 0 chrUextra 12782668 12782733 -16221923 + R1_DM LINE R1 5291 5356 0 9 682 4995 5 0 2 chrUextra 12782740 12783298 -16221358 + R1_DM LINE R1 4800 5356 0 9 682 974 9 0 0 chrUextra 12783296 12783403 -16221253 + LSU-rRNA_Dme rRNA rRNA 2640 2746 -1154 9 682 2919 206 17 20 chrUextra 12783507 12784237 -16220419 - SAR_DM Satellite Satellite -620 727 1 9 682 6713 1 0 0 chrUextra 12784338 12785072 -16219584 + DOC LINE Jockey 3576 4309 -416 9 682 3095 177 20 29 chrUextra 12785172 12785905 -16218751 - SAR_DM Satellite Satellite -321 1151 425 9 682 306 0 0 0 chrUextra 12786702 12786736 -16217920 + (GAGAA)n Simple_repeat Simple_repeat 2 35 0 9 682 22 56 0 0 chrUextra 12786887 12786923 -16217733 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 262 150 0 0 chrUextra 12786928 12786968 -16217688 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 262 150 0 0 chrUextra 12787020 12787060 -16217596 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 262 150 0 0 chrUextra 12787112 12787152 -16217504 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 269 125 0 0 chrUextra 12787195 12787235 -16217421 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 22 56 0 0 chrUextra 12787248 12787284 -16217372 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 907 9 0 27 chrUextra 12787310 12787422 -16217234 + NTS_DM Other Other 25 133 -107 9 682 1198 20 0 7 chrUextra 12787422 12787574 -16217082 + NTS_DM Other Other 38 188 -52 9 682 22 35 0 0 chrUextra 12788146 12788175 -16216481 + AT_rich Low_complexity Low_complexity 1 29 0 9 682 6501 4 1 1 chrUextra 12788508 12789242 -16215414 + R1_DM LINE R1 124 857 -4499 9 682 1164 20 0 7 chrUextra 12789342 12789490 -16215166 - NTS_DM Other Other -56 184 38 9 682 907 9 0 27 chrUextra 12789490 12789602 -16215054 - NTS_DM Other Other -107 133 25 9 682 22 56 0 0 chrUextra 12789628 12789664 -16214992 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 269 125 0 0 chrUextra 12789677 12789717 -16214939 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12789760 12789800 -16214856 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12789852 12789892 -16214764 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12789944 12789984 -16214672 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 27 29 0 0 chrUextra 12789989 12790023 -16214633 + AT_rich Low_complexity Low_complexity 1 34 0 9 682 1528 0 11 11 chrUextra 12791010 12791195 -16213461 + LSU-rRNA_Dme rRNA rRNA 1604 1788 -2112 9 682 4595 4 0 0 chrUextra 12791239 12791744 -16212912 + LSU-rRNA_Dme rRNA rRNA 1788 2292 -1608 9 682 1263 26 0 13 chrUextra 12791844 12792001 -16212655 - DM297_I LTR Gypsy -6012 155 1 9 682 3523 5 7 7 chrUextra 12792001 12792415 -16212241 - DM297_LTR LTR Gypsy 0 414 1 9 682 661 174 0 12 chrUextra 12792415 12792578 -16212078 + (TA)n Simple_repeat Simple_repeat 1 161 0 9 682 6174 1 0 0 chrUextra 12792685 12793412 -16211244 + DM176_I LTR Gypsy 5338 6064 -356 9 682 3032 187 20 25 chrUextra 12793513 12794246 -16210410 - SAR_DM Satellite Satellite -300 1172 443 9 682 5778 31 0 1 chrUextra 12794346 12795080 -16209576 - DM297_I LTR Gypsy -4466 1701 969 9 682 23 68 0 0 chrUextra 12795360 12795404 -16209252 + AT_rich Low_complexity Low_complexity 1 44 0 9 682 26 30 0 0 chrUextra 12795450 12795483 -16209173 + AT_rich Low_complexity Low_complexity 1 33 0 9 682 432 19 19 0 chrUextra 12795861 12795914 -16208742 - PROTOP_B DNA P 0 1153 1100 9 682 2425 181 20 9 chrUextra 12796015 12796706 -16207950 - SAR_DM Satellite Satellite -414 699 1 9 682 3501 169 10 10 chrUextra 12796850 12797577 -16207079 - SAR_DM Satellite Satellite -425 1047 321 9 682 6041 25 55 0 chrUextra 12797682 12798416 -16206240 + R1_DM LINE R1 2257 3030 -2326 9 682 360 196 45 89 chrUextra 12798517 12798674 -16205982 + QUASIMODO_LTR LTR Gypsy 494 643 -15 9 682 580 288 16 16 chrUextra 12798909 12799156 -16205500 + TV1I LTR Gypsy 712 958 -5005 9 682 2599 68 35 38 chrUextra 12799670 12800069 -16204587 + CIRCE LINE Composite 4981 5378 -978 9 682 6347 18 0 0 chrUextra 12800186 12800918 -16203738 + FW_DM LINE Jockey 1452 2183 -2509 9 682 5250 3 1 48 chrUextra 12801852 12802586 -16202070 - DM412 LTR Gypsy -6304 593 1 9 682 3050 177 26 25 chrUextra 12802690 12803420 -16201236 - SAR_DM Satellite Satellite -313 1159 429 9 682 647 123 0 0 chrUextra 12803520 12803626 -16201030 - ARS406_DM Unknown Unknown -247 106 1 9 682 3152 184 14 15 chrUextra 12803533 12804254 -16200402 + SAR_DM Satellite Satellite 195 914 -558 9 682 2300 162 11 14 chrUextra 12804364 12805087 -16199569 + SAR_DM Satellite Satellite 1 720 -483 9 682 2737 166 8 1 chrUextra 12805188 12805919 -16198737 - SAR_DM Satellite Satellite -702 735 1 9 682 3377 167 18 8 chrUextra 12806023 12806735 -16197921 - SAR_DM Satellite Satellite -428 1044 326 9 682 195 42 0 0 chrUextra 12807566 12807590 -16197066 + (TC)n Simple_repeat Simple_repeat 1 24 0 9 682 6369 11 0 0 chrUextra 12807690 12808424 -16196232 + STALKER4_I LTR Gypsy 1365 2098 -4432 9 682 3043 208 11 18 chrUextra 12808524 12809255 -16195401 - SAR_DM Satellite Satellite -616 725 1 9 682 3673 97 188 4 chrUextra 12809358 12810092 -16194564 - TART LINE telomeric -6799 7678 6943 9 682 4709 0 0 2 chrUextra 12811037 12811556 -16193100 - NOMAD_LTR LTR Gypsy 0 518 1 9 682 42 0 0 0 chrUextra 12811556 12811598 -16193058 + AT_rich Low_complexity Low_complexity 1 42 0 9 682 551 0 131 6 chrUextra 12811598 12811758 -16192898 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 682 629 305 21 21 chrUextra 12811860 12812148 -16192508 - TV1I LTR Gypsy -5078 885 598 9 682 2710 109 2 24 chrUextra 12812169 12812583 -16192073 - Gypsy12_I LTR Gypsy -4442 1104 700 9 682 645 312 17 61 chrUextra 12812988 12813285 -16191371 - Gypsy8_I LTR Gypsy -1905 2442 2159 9 682 602 209 136 37 chrUextra 12814362 12814576 -16190080 + XDMR_DM Unknown Unknown 126 360 0 9 682 2794 187 8 9 chrUextra 12814437 12815070 -16189586 - SAR_DM Satellite Satellite -649 823 192 9 682 841 90 0 0 chrUextra 12814974 12815096 -16189560 + ARS406_DM Unknown Unknown 1 122 -231 9 682 3198 85 123 36 chrUextra 12815245 12815796 -16188860 - MDG1_I LTR Gypsy -5462 1134 536 9 682 3431 169 14 11 chrUextra 12816030 12816761 -16187895 - SAR_DM Satellite Satellite -447 1025 293 9 682 6233 30 3 0 chrUextra 12817698 12818432 -16186224 + R1_DM LINE R1 4591 5326 -30 9 682 3273 178 25 10 chrUextra 12818539 12819266 -16185390 + SAR_DM Satellite Satellite 295 1032 -440 9 682 1477 0 0 0 chrUextra 12819939 12820100 -16184556 - SSU-rRNA_Dme rRNA rRNA 0 1995 1835 9 682 367 24 0 0 chrUextra 12820200 12820242 -16184414 - LSU-rRNA_Dme rRNA rRNA -1219 2681 2640 9 682 6141 7 0 3 chrUextra 12820240 12820934 -16183722 - R1_DM LINE R1 0 5356 4665 9 682 37 39 0 0 chrUextra 12821056 12821107 -16183549 + AT_rich Low_complexity Low_complexity 1 51 0 9 682 22 35 0 0 chrUextra 12821208 12821237 -16183419 + AT_rich Low_complexity Low_complexity 1 29 0 9 682 21 57 0 0 chrUextra 12821434 12821469 -16183187 + AT_rich Low_complexity Low_complexity 1 35 0 9 682 2067 8 0 0 chrUextra 12821469 12821709 -16182947 + ALUII_DM Unknown Unknown 1 240 0 9 682 1467 88 0 0 chrUextra 12821868 12822060 -16182596 + HMSBEAGLE_I LTR Gypsy 1628 1819 -4710 9 682 1904 157 79 81 chrUextra 12822050 12822507 -16182149 + HMSBEAGLE_I LTR Gypsy 2346 2801 -3728 9 682 489 217 0 0 chrUextra 12822506 12822598 -16182058 + HMSBEAGLE_I LTR Gypsy 3155 3246 -3283 9 682 6595 1 1 3 chrUextra 12822702 12823436 -16181220 - SSU-rRNA_Dme rRNA rRNA -635 1360 628 9 682 6659 3 0 0 chrUextra 12823536 12824270 -16180386 + R1_DM LINE R1 4147 4880 -476 9 682 6726 0 0 1 chrUextra 12824370 12825104 -16179552 + R2_DM LINE R2 1671 2403 -1204 9 682 6187 36 0 7 chrUextra 12825204 12825936 -16178720 - BATUMI_I LTR Pao -1690 6273 5547 9 682 784 31 45 30 chrUextra 12826038 12826171 -16178485 + NTS_DM Other Other 106 240 0 9 682 1813 21 17 17 chrUextra 12826171 12826411 -16178245 + NTS_DM Other Other 1 240 0 9 682 1813 21 17 17 chrUextra 12826411 12826651 -16178005 + NTS_DM Other Other 1 240 0 9 682 1053 16 0 0 chrUextra 12826651 12826772 -16177884 + NTS_DM Other Other 1 121 -119 9 682 224 185 31 0 chrUextra 12827144 12827209 -16177447 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 682 3209 2 31 7 chrUextra 12827711 12828130 -16176526 + HMSBEAGLE_I LTR Gypsy 368 796 -5733 9 682 633 51 42 17 chrUextra 12828130 12828250 -16176406 + (TTA)n Simple_repeat Simple_repeat 3 125 0 9 682 1532 0 0 5 chrUextra 12828250 12828440 -16176216 + HMSBEAGLE_I LTR Gypsy 976 1164 -5365 9 682 6601 1 0 3 chrUextra 12828540 12829274 -16175382 + FW_DM LINE Jockey 3571 4302 -390 9 682 6564 0 0 0 chrUextra 12829374 12830108 -16174548 - ROO_I LTR Pao -1643 6613 5880 9 682 2571 184 21 17 chrUextra 12830208 12830939 -16173717 + SAR_DM Satellite Satellite 1 733 -353 9 682 6293 25 19 0 chrUextra 12831042 12831776 -16172880 - DIVER_I LTR Pao -3892 1751 1004 9 682 1173 31 0 0 chrUextra 12831879 12832039 -16172617 + FW_DM LINE Jockey 4533 4692 0 9 682 4413 25 51 19 chrUextra 12832037 12832610 -16172046 - ROO_I LTR Pao -4051 4205 3615 9 682 2380 27 3 10 chrUextra 12832711 12833014 -16171642 + IDEFIX_LTR LTR Gypsy 294 594 0 9 682 25 0 0 0 chrUextra 12833204 12833229 -16171427 + AT_rich Low_complexity Low_complexity 1 25 0 9 682 5149 24 0 3 chrUextra 12834378 12835017 -16169639 - PROTOP DNA P -3843 637 1 9 682 28 48 0 0 chrUextra 12836136 12836178 -16168478 + AT_rich Low_complexity Low_complexity 1 42 0 9 682 488 119 36 0 chrUextra 12836452 12836536 -16168120 - NTS_DM Other Other -150 90 4 9 682 1021 8 0 22 chrUextra 12836646 12836780 -16167876 - NTS_DM Other Other -78 162 32 9 682 22 0 0 0 chrUextra 12837428 12837450 -16167206 + AT_rich Low_complexity Low_complexity 1 22 0 9 682 2325 0 0 0 chrUextra 12837714 12837982 -16166674 - G6_DM LINE Jockey -1774 268 1 9 682 3895 0 0 2 chrUextra 12837982 12838448 -16166208 + POGO DNA Pogo 1623 2087 -34 9 682 25 0 0 0 chrUextra 12838746 12838771 -16165885 + AT_rich Low_complexity Low_complexity 1 25 0 9 682 1698 41 0 0 chrUextra 12839064 12839282 -16165374 + IDEFIX_I LTR Gypsy 1 218 -5410 9 682 2347 228 27 15 chrUextra 12840220 12840949 -16163707 - G_DM LINE Jockey -441 1601 871 9 682 5974 23 3 0 chrUextra 12841053 12841784 -16162872 + G2_DM LINE Jockey 1657 2389 -713 9 682 4993 2 0 0 chrUextra 12841884 12842456 -16162200 + LSU-rRNA_Dme rRNA rRNA 2010 2581 -1319 9 682 1240 7 0 0 chrUextra 12842474 12842618 -16162038 + R2_DM LINE R2 1 144 -3463 9 682 3262 138 28 55 chrUextra 12842725 12843452 -16161204 + TART LINE telomeric 9534 10240 -4237 9 682 1899 0 4 0 chrUextra 12843552 12843779 -16160877 - BLASTOPIA_I LTR Gypsy -4253 228 1 9 682 1982 16 8 12 chrUextra 12843785 12844042 -16160614 - BLASTOPIA_LTR LTR Gypsy -19 256 1 9 682 1179 117 0 0 chrUextra 12844048 12844228 -16160428 + (TATG)n Simple_repeat Simple_repeat 1 180 0 9 682 375 121 0 0 chrUextra 12844228 12844286 -16160370 + (TA)n Simple_repeat Simple_repeat 1 58 0 9 85 6333 4 0 1 chrUextra 12844386 12845120 -16159536 - LSU-rRNA_Dme rRNA rRNA -1069 2831 2099 9 683 4514 26 61 0 chrUextra 12845220 12845954 -16158702 + R1_DM LINE R1 4129 4907 -449 9 683 6188 12 0 1 chrUextra 12846054 12846788 -16157868 + DMRT1A LINE R1 3967 4699 -484 9 683 5836 27 22 3 chrUextra 12846888 12847622 -16157034 + R1_DM LINE R1 1608 2355 -3001 9 683 5409 30 30 0 chrUextra 12847722 12848456 -16156200 + PROTOP DNA P 484 1239 -3241 9 683 3437 173 18 7 chrUextra 12848556 12849290 -16155366 + DM412 LTR Gypsy 5370 6111 -786 9 683 3167 182 8 11 chrUextra 12849390 12850124 -16154532 - SAR_DM Satellite Satellite -491 981 250 9 683 1557 32 0 2 chrUextra 12850229 12850822 -16153834 + (TTA)n Simple_repeat Simple_repeat 1 591 0 9 683 346 55 5 111 chrUextra 12850826 12850919 -16153737 - MDG1_I LTR Gypsy 0 6596 6529 9 683 27 29 0 0 chrUextra 12850924 12850958 -16153698 + AT_rich Low_complexity Low_complexity 1 34 0 9 683 25 31 0 0 chrUextra 12851252 12851284 -16153372 + AT_rich Low_complexity Low_complexity 1 32 0 9 683 6312 0 0 0 chrUextra 12852726 12853460 -16151196 + FW_DM LINE Jockey 2825 3558 -1134 9 683 4426 9 3 15 chrUextra 12853560 12854146 -16150510 + Stalker2_I LTR Gypsy 1014 1592 -5810 9 683 6171 8 0 0 chrUextra 12854394 12855128 -16149528 - FW_DM LINE Jockey -2954 1738 1005 9 683 6295 7 1 0 chrUextra 12855228 12855962 -16148694 + FW_DM LINE Jockey 3634 4368 -324 9 683 1930 56 7 15 chrUextra 12856062 12856332 -16148324 + R1_DM LINE R1 1970 2237 -3119 9 683 645 31 219 0 chrUextra 12856413 12856509 -16148147 - Gypsy6A_LTR LTR Gypsy -233 187 71 9 683 1288 127 75 30 chrUextra 12856527 12856795 -16147861 + R1_DM LINE R1 1 280 -5076 9 683 979 58 0 0 chrUextra 12856896 12857033 -16147623 + MDG1_I LTR Gypsy 225 361 -6235 9 683 2989 68 15 7 chrUextra 12857030 12857490 -16147166 + MDG1_I LTR Gypsy 672 1135 -5461 9 683 632 0 0 0 chrUextra 12857555 12857629 -16147027 - Invader2_LTR LTR Gypsy 0 266 193 9 683 6373 3 0 0 chrUextra 12857730 12858464 -16146192 + TAHRE LINE telomeric 9545 10278 -185 9 683 6362 0 0 0 chrUextra 12858564 12859298 -16145358 + DOC LINE Jockey 2813 3546 -1179 9 683 3023 169 30 10 chrUextra 12859412 12860106 -16144550 + SAR_DM Satellite Satellite 369 1076 -396 9 683 3099 172 10 23 chrUextra 12860235 12860966 -16143690 - SAR_DM Satellite Satellite -361 1111 391 9 683 5264 52 38 3 chrUextra 12861067 12861800 -16142856 + R1_DM LINE R1 193 951 -4405 9 683 6195 0 1 1 chrUextra 12861900 12862634 -16142022 + LSU-rRNA_Dme rRNA rRNA 354 1087 -2813 9 683 6072 26 0 3 chrUextra 12862734 12863468 -16141188 + R2_DM LINE R2 1940 2671 -936 9 683 2119 181 8 6 chrUextra 12863578 12864297 -16140359 - SAR_DM Satellite Satellite -396 720 1 9 683 3348 0 0 0 chrUextra 12864402 12864795 -16139861 + FW_DM LINE Jockey 4300 4692 0 9 683 1386 160 60 13 chrUextra 12864820 12865136 -16139520 + SAR_DM Satellite Satellite 321 651 -821 9 683 1066 266 33 13 chrUextra 12865285 12865681 -16138975 + TIRANT_I LTR Gypsy 3444 3847 -3845 9 683 832 253 4 22 chrUextra 12865701 12865968 -16138688 + ZAM_I LTR Gypsy 3824 4085 -3405 9 683 6108 18 5 0 chrUextra 12866070 12866804 -16137852 - R1_DM LINE R1 -2950 2406 1669 9 683 1620 25 6 8 chrUextra 12867164 12867525 -16137131 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 9 683 433 144 63 0 chrUextra 12867525 12867636 -16137020 + CT-rich Low_complexity Low_complexity 5 122 0 9 683 6046 14 0 8 chrUextra 12867738 12868472 -16136184 + Gypsy4_I LTR Gypsy 777 1504 -4784 9 683 6156 18 9 0 chrUextra 12868572 12869306 -16135350 - Copia2_I LTR Copia -1755 2407 1667 9 683 3070 181 13 19 chrUextra 12869409 12870140 -16134516 + SAR_DM Satellite Satellite 1 726 -396 9 683 6256 3 3 0 chrUextra 12870240 12870974 -16133682 - DM176_I LTR Gypsy -5069 1351 616 9 683 2914 170 16 20 chrUextra 12871075 12871767 -16132889 - SAR_DM Satellite Satellite -593 879 191 9 683 6397 1 1 1 chrUextra 12871908 12872642 -16132014 - LSU-rRNA_Dme rRNA rRNA -282 3618 2885 9 683 5869 25 3 1 chrUextra 12872742 12873476 -16131180 - R1_DM LINE R1 -1338 4018 3284 9 683 6111 1 16 0 chrUextra 12873576 12874310 -16130346 + ROO_I LTR Pao 28 773 -7483 9 683 3122 170 8 14 chrUextra 12874417 12875134 -16129522 + SAR_DM Satellite Satellite 326 1038 -434 9 683 224 185 31 0 chrUextra 12875456 12875521 -16129135 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 683 6206 3 1 0 chrUextra 12876078 12876812 -16127844 - DM176_I LTR Gypsy -1666 4754 4020 9 683 551 0 124 12 chrUextra 12876915 12877076 -16127580 + (GA)n Simple_repeat Simple_repeat 2 180 0 9 683 1699 33 124 0 chrUextra 12877889 12878130 -16126526 + Baggins1 LINE LOA 4727 4997 -456 9 683 965 50 0 92 chrUextra 12878126 12878279 -16126377 + Baggins1 LINE LOA 5315 5453 0 9 683 6297 0 3 4 chrUextra 12878580 12879314 -16125342 - SSU-rRNA_Dme rRNA rRNA -146 1849 1117 9 683 2673 0 3 0 chrUextra 12879415 12879723 -16124933 + LSU-rRNA_Dme rRNA rRNA 2324 2632 -1268 9 683 3663 0 5 0 chrUextra 12879723 12880148 -16124508 + R1_DM LINE R1 1 427 -4929 9 683 4050 89 45 48 chrUextra 12880248 12880982 -16123674 + TART LINE telomeric 2622 3353 -11124 9 683 355 187 0 0 chrUextra 12881082 12881157 -16123499 - ARS406_DM Unknown Unknown -278 75 1 9 683 3038 170 29 19 chrUextra 12881095 12881814 -16122842 + SAR_DM Satellite Satellite 224 949 -523 9 683 4291 12 0 0 chrUextra 12881916 12882418 -16122238 + Gypsy4_I LTR Gypsy 5787 6288 0 9 683 1922 13 9 0 chrUextra 12882418 12882650 -16122006 + Gypsy4_LTR LTR Gypsy 1 234 -53 9 683 2622 3 0 0 chrUextra 12882750 12883057 -16121599 - MDG3_I LTR Gypsy -2333 2653 2347 9 683 3463 9 0 0 chrUextra 12883055 12883484 -16121172 - MDG3_I LTR Gypsy -2790 2196 1768 9 683 6376 4 0 0 chrUextra 12884418 12885152 -16119504 - BS2 LINE Jockey -355 4366 3633 9 683 6154 4 3 3 chrUextra 12885252 12885986 -16118670 - R1_DM LINE R1 -927 4429 3696 9 683 5929 14 4 1 chrUextra 12886920 12887654 -16117002 - ROO_I LTR Pao -4092 4164 3429 9 683 6172 0 1 1 chrUextra 12887754 12888488 -16116168 + STALKER4_I LTR Gypsy 660 1393 -5137 9 683 3459 46 33 10 chrUextra 12888588 12889068 -16115588 + BATUMI_I LTR Pao 6511 7001 -962 9 683 1876 252 59 52 chrUextra 12888592 12889320 -16115336 - MAX_I LTR Pao -744 7170 6438 9 683 5802 27 30 1 chrUextra 12889422 12890156 -16114500 - R1_DM LINE R1 -818 4538 3784 9 683 5997 0 16 1 chrUextra 12890256 12890990 -16113666 + ROO_I LTR Pao 119 863 -7393 9 683 4480 42 0 2 chrUextra 12891090 12891661 -16112995 + MDG1_I LTR Gypsy 3602 4171 -2425 9 683 1495 11 0 0 chrUextra 12891647 12891824 -16112832 + MDG1_I LTR Gypsy 4367 4543 -2053 9 683 6375 0 0 0 chrUextra 12891924 12892658 -16111998 - ROO_I LTR Pao -5285 2971 2238 9 683 831 113 249 0 chrUextra 12892758 12892935 -16111721 + TAHRE LINE telomeric 7619 7839 -6638 9 683 1696 95 50 45 chrUextra 12892938 12893325 -16111331 + TAHRE LINE telomeric 10186 10663 -3814 9 683 818 184 30 0 chrUextra 12893324 12893492 -16111164 + TAHRE LINE telomeric 7044 7216 -3247 9 683 752 25 32 32 chrUextra 12893592 12893717 -16110939 + NTS_DM Other Other 116 240 0 9 683 1726 17 17 21 chrUextra 12893717 12893958 -16110698 + NTS_DM Other Other 1 240 0 9 683 1734 21 17 17 chrUextra 12893958 12894198 -16110458 + NTS_DM Other Other 1 240 0 9 683 1042 0 0 8 chrUextra 12894198 12894323 -16110333 + NTS_DM Other Other 1 124 -116 9 683 24 0 0 0 chrUextra 12895310 12895334 -16109322 + AT_rich Low_complexity Low_complexity 1 24 0 9 683 1140 328 43 24 chrUextra 12896102 12896820 -16107836 + Gypsy2_I LTR Gypsy 3360 4091 -2044 9 683 6212 0 0 1 chrUextra 12896927 12897660 -16106996 - LSU-rRNA_Dme rRNA rRNA -2808 1092 361 9 683 2273 215 44 22 chrUextra 12897760 12898484 -16106172 + SAR_DM Satellite Satellite 419 1158 -314 9 683 6311 0 3 0 chrUextra 12898604 12899326 -16105330 - LSU-rRNA_Dme rRNA rRNA 0 3900 3177 9 683 2522 135 85 35 chrUextra 12900262 12900992 -16103664 + STALKER4_I LTR Gypsy 358 1172 -5358 9 683 6310 1 3 3 chrUextra 12901092 12901825 -16102831 - SSU-rRNA_Dme rRNA rRNA -117 1878 1146 9 683 488 119 36 0 chrUextra 12902080 12902164 -16102492 - NTS_DM Other Other -150 90 4 9 683 1301 6 0 18 chrUextra 12902274 12902439 -16102217 - NTS_DM Other Other -78 162 1 9 683 1614 9 23 14 chrUextra 12902439 12902658 -16101998 - NTS_DM Other Other 0 240 20 9 683 3557 2 2 0 chrUextra 12902758 12903173 -16101483 - LSU-rRNA_Dme rRNA rRNA -845 3055 2640 9 683 2711 9 3 0 chrUextra 12903171 12903491 -16101165 - R1_DM LINE R1 0 5356 5036 9 683 3022 8 2 27 chrUextra 12903591 12903993 -16100663 - PROTOP_A DNA P -267 838 447 9 683 2671 28 0 0 chrUextra 12904001 12904324 -16100332 - PROTOP_A DNA P -778 327 5 9 683 3050 188 7 10 chrUextra 12904424 12905149 -16099507 + SAR_DM Satellite Satellite 272 994 -478 9 683 2981 43 66 33 chrUextra 12905258 12905744 -16098912 + PROTOP_B DNA P 435 936 -217 9 683 286 50 0 0 chrUextra 12905737 12905797 -16098859 + PROTOP_B DNA P 572 631 -522 9 683 1319 58 16 0 chrUextra 12905802 12905990 -16098666 + PROTOP_B DNA P 794 984 -169 9 683 871 102 0 35 chrUextra 12906090 12906233 -16098423 - TART LINE telomeric -9017 5460 5323 9 683 1413 143 4 4 chrUextra 12906213 12906465 -16098191 - TART LINE telomeric -10594 3883 3632 9 683 629 12 75 0 chrUextra 12906463 12906543 -16098113 - PROTOP_B DNA P -1067 86 1 9 683 198 0 0 0 chrUextra 12906714 12906736 -16097920 + (CAA)n Simple_repeat Simple_repeat 2 23 0 9 683 6144 0 0 0 chrUextra 12906923 12907656 -16097000 - TABOR_I LTR Gypsy -5054 1282 550 9 683 5939 19 4 1 chrUextra 12907756 12908489 -16096167 - R1_DM LINE R1 -1429 3927 3193 9 683 629 0 43 32 chrUextra 12908589 12908683 -16095973 + NTS_DM Other Other 146 240 0 9 683 1847 4 17 13 chrUextra 12908683 12908922 -16095734 + NTS_DM Other Other 1 240 0 9 683 1301 6 0 18 chrUextra 12908922 12909087 -16095569 + NTS_DM Other Other 1 162 -78 9 683 476 131 36 0 chrUextra 12909197 12909281 -16095375 + NTS_DM Other Other 4 90 -150 9 683 1755 5 0 5 chrUextra 12909422 12909627 -16095029 - LSU-rRNA_Dme rRNA rRNA -1057 2843 2640 9 683 4630 0 0 0 chrUextra 12909625 12910155 -16094501 - R1_DM LINE R1 0 5356 4827 9 683 6257 1 0 4 chrUextra 12910255 12910988 -16093668 - DOC LINE Jockey -1784 2941 2212 9 683 293 263 32 0 chrUextra 12911088 12911183 -16093473 - Gypsy12_LTR LTR Gypsy -465 1871 1774 9 683 29 60 0 0 chrUextra 12911241 12911291 -16093365 + AT_rich Low_complexity Low_complexity 1 50 0 9 683 980 264 36 69 chrUextra 12911297 12911821 -16092835 - Gypsy12_LTR LTR Gypsy -1187 1149 643 9 683 5661 12 0 0 chrUextra 12911921 12912654 -16092002 + DM176_I LTR Gypsy 5600 6332 -88 9 683 22 35 0 0 chrUextra 12912874 12912903 -16091753 + AT_rich Low_complexity Low_complexity 1 29 0 9 683 21 57 0 0 chrUextra 12913100 12913135 -16091521 + AT_rich Low_complexity Low_complexity 1 35 0 9 683 1985 8 0 0 chrUextra 12913135 12913375 -16091281 + ALUII_DM Unknown Unknown 1 240 0 9 683 22 35 0 0 chrUextra 12913695 12913724 -16090932 + AT_rich Low_complexity Low_complexity 1 29 0 9 683 21 57 0 0 chrUextra 12913921 12913956 -16090700 + AT_rich Low_complexity Low_complexity 1 35 0 9 683 2025 0 0 0 chrUextra 12913956 12914196 -16090460 + ALUII_DM Unknown Unknown 1 240 0 9 683 3974 86 9 25 chrUextra 12914423 12915065 -16089591 - CIRCE LINE Composite -1436 4920 4289 9 683 520 51 0 93 chrUextra 12915067 12915153 -16089503 - CIRCE LINE Composite -2317 4039 3962 9 683 6340 1 3 1 chrUextra 12915254 12915986 -16088670 + SSU-rRNA_Dme rRNA rRNA 1168 1900 -95 9 683 3795 183 4 0 chrUextra 12916086 12916819 -16087837 + ROVER-I_DM LTR Gypsy 3532 4267 -2317 9 683 1241 6 0 30 chrUextra 12916990 12917157 -16087499 - NTS_DM Other Other -78 162 1 9 683 1847 4 17 13 chrUextra 12917157 12917396 -16087260 - NTS_DM Other Other 0 240 1 9 683 1843 4 17 13 chrUextra 12917396 12917635 -16087021 - NTS_DM Other Other 0 240 1 9 683 3202 174 9 18 chrUextra 12917752 12918485 -16086171 + SAR_DM Satellite Satellite 380 1106 -366 9 683 6303 1 0 0 chrUextra 12918585 12919318 -16085338 - R1_DM LINE R1 -1992 3364 2632 9 683 6206 11 0 0 chrUextra 12919418 12920151 -16084505 + DOC2_DM LINE Jockey 2920 3652 -1141 9 683 5187 2 0 2 chrUextra 12920390 12920984 -16083672 + SSU-rRNA_Dme rRNA rRNA 1 593 -1402 9 683 6243 3 0 1 chrUextra 12921084 12921815 -16082841 - R1_DM LINE R1 -1714 3642 2913 9 683 828 98 0 0 chrUextra 12921920 12922052 -16082604 - ARS406_DM Unknown Unknown -221 132 1 9 683 2884 183 12 10 chrUextra 12921959 12922649 -16082007 + SAR_DM Satellite Satellite 195 885 -587 9 683 5699 52 0 0 chrUextra 12922750 12923483 -16081173 - IDEFIX_I LTR Gypsy -3474 2154 1422 9 683 6272 8 0 0 chrUextra 12923583 12924316 -16080340 - R1_DM LINE R1 -481 4875 4143 9 683 1080 24 24 24 chrUextra 12924416 12924584 -16080072 + NTS_DM Other Other 73 240 0 9 683 1850 4 17 13 chrUextra 12924584 12924823 -16079833 + NTS_DM Other Other 1 240 0 9 683 1670 34 12 21 chrUextra 12924823 12925064 -16079592 + NTS_DM Other Other 1 239 -1 9 683 659 12 0 12 chrUextra 12925066 12925147 -16079509 + NTS_DM Other Other 1 80 -160 9 683 2369 101 20 12 chrUextra 12925249 12925982 -16078674 + DMSAT6 Satellite Satellite 1 739 -51 9 683 2521 34 47 0 chrUextra 12926495 12926815 -16077841 + PROTOP DNA P 1 335 -4145 9 683 1170 0 0 0 chrUextra 12926915 12927045 -16077611 + (GAGAA)n Simple_repeat Simple_repeat 2 131 0 9 683 326 0 22 0 chrUextra 12927748 12927793 -16076863 - DMCR1A LINE CR1 -463 4007 3962 9 683 3105 55 29 0 chrUextra 12927778 12928194 -16076462 - DOC3_DM LINE Jockey -1248 3492 3065 9 683 2346 28 0 0 chrUextra 12928195 12928481 -16076175 + PROTOP_A DNA P 1 286 -819 9 683 6441 1 0 0 chrUextra 12928581 12929314 -16075342 - R2_DM LINE R2 -1187 2420 1688 9 683 252 250 0 0 chrUextra 12929605 12929665 -16074991 + TV1I LTR Gypsy 5903 5962 -1 9 683 2785 182 21 28 chrUextra 12930250 12930972 -16073684 + SAR_DM Satellite Satellite 456 1172 -300 9 683 5922 22 1 1 chrUextra 12931080 12931813 -16072843 - R1_DM LINE R1 -1349 4007 3275 9 683 576 139 100 221 chrUextra 12931913 12932144 -16072512 + HOBO DNA hAT 114 316 -2700 9 683 1872 96 181 18 chrUextra 12932145 12932542 -16072114 + PROTOP_B DNA P 17 478 -675 9 683 726 111 0 8 chrUextra 12932519 12932646 -16072010 + HOBO DNA hAT 330 455 -2561 9 683 5814 26 0 14 chrUextra 12932746 12933479 -16071177 + FW_DM LINE Jockey 1250 1972 -2720 9 683 6369 1 3 0 chrUextra 12933579 12934312 -16070344 - MDG3_I LTR Gypsy -3537 1449 715 9 683 563 98 108 0 chrUextra 12934412 12934514 -16070142 - ARS406_DM Unknown Unknown -240 113 1 9 683 2893 183 42 6 chrUextra 12934432 12935145 -16069511 + SAR_DM Satellite Satellite 195 933 -539 9 683 2633 197 10 13 chrUextra 12935273 12935961 -16068695 - SAR_DM Satellite Satellite -411 1061 376 9 683 612 14 0 0 chrUextra 12936078 12936150 -16068506 - NTS_DM Other Other -168 72 1 9 683 1817 4 17 17 chrUextra 12936150 12936390 -16068266 - NTS_DM Other Other 0 240 1 9 683 1847 4 17 13 chrUextra 12936390 12936629 -16068027 - NTS_DM Other Other 0 240 1 9 683 1271 11 22 16 chrUextra 12936629 12936811 -16067845 - NTS_DM Other Other 0 240 58 9 683 4395 0 4 0 chrUextra 12937139 12937644 -16067012 - SSU-rRNA_Dme rRNA rRNA 0 1995 1489 9 683 5937 27 0 1 chrUextra 12937744 12938477 -16066179 + R1_DM LINE R1 2227 2958 -2398 9 683 1292 318 18 25 chrUextra 12938585 12939310 -16065346 - Invader6_I LTR Gypsy -1564 2535 1816 9 683 6234 3 1 3 chrUextra 12939410 12940143 -16064513 + G_DM LINE Jockey 2420 3151 -1195 9 683 5944 1 0 0 chrUextra 12940249 12940976 -16063680 + QUASIMODO_I LTR Gypsy 3303 4029 -2031 9 683 2751 3 0 0 chrUextra 12941495 12941809 -16062847 - ROO_LTR LTR Pao 0 428 115 9 683 6241 3 0 0 chrUextra 12941909 12942642 -16062014 + Copia_I LTR Copia 1360 2092 -2501 9 683 6432 3 0 0 chrUextra 12942742 12943475 -16061181 + SSU-rRNA_Dme rRNA rRNA 186 918 -1077 9 683 3534 21 0 0 chrUextra 12943575 12944001 -16060655 + NINJA_I LTR Pao 4189 4614 -1397 9 683 1852 62 4 15 chrUextra 12943985 12944245 -16060411 + NINJA_I LTR Pao 4755 5011 -1000 9 683 504 17 0 0 chrUextra 12944247 12944307 -16060349 + NINJA_I LTR Pao 5220 5279 -732 9 683 363 33 180 0 chrUextra 12944548 12944609 -16060047 + I_DM LINE I 5396 5467 -764 9 683 704 99 244 23 chrUextra 12944617 12944824 -16059832 - PROTOP_B DNA P -484 669 417 9 683 1700 35 269 0 chrUextra 12944828 12945141 -16059515 - DOC3_DM LINE Jockey 0 4740 4344 9 683 5723 35 14 0 chrUextra 12945241 12945974 -16058682 - MDG1_I LTR Gypsy -619 5977 5235 9 683 5977 22 0 1 chrUextra 12946074 12946798 -16057858 - R1_DM LINE R1 -67 5289 4567 9 683 5682 28 6 11 chrUextra 12946907 12947640 -16057016 + BATUMI_I LTR Pao 1782 2510 -5453 9 683 2316 45 52 0 chrUextra 12948998 12949306 -16055350 + PROTOP DNA P 1 324 -4156 9 683 782 127 0 15 chrUextra 12949407 12949543 -16055113 + DMLTR5 LTR Gypsy 133 266 0 9 683 1977 105 22 38 chrUextra 12949542 12949907 -16054749 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 9 683 33 43 0 0 chrUextra 12949922 12949969 -16054687 + AT_rich Low_complexity Low_complexity 1 47 0 9 683 6276 11 1 0 chrUextra 12950241 12950972 -16053684 + LSU-rRNA_Dme rRNA rRNA 3062 3793 -107 9 683 5924 20 6 0 chrUextra 12951072 12951802 -16052854 + DOC2_DM LINE Jockey 915 1648 -3145 9 683 3356 170 11 7 chrUextra 12951905 12952638 -16052018 + SAR_DM Satellite Satellite 284 1019 -453 9 683 1576 0 0 0 chrUextra 12952738 12952917 -16051739 + LSU-rRNA_Dme rRNA rRNA 3722 3900 0 9 683 27 29 0 0 chrUextra 12952989 12953023 -16051633 + AT_rich Low_complexity Low_complexity 1 34 0 9 683 22 56 0 0 chrUextra 12953087 12953123 -16051533 + AT_rich Low_complexity Low_complexity 1 36 0 9 683 246 150 0 0 chrUextra 12953128 12953168 -16051488 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 246 150 0 0 chrUextra 12953220 12953260 -16051396 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 246 150 0 0 chrUextra 12953312 12953352 -16051304 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 255 125 0 0 chrUextra 12953395 12953435 -16051221 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 1046 8 8 0 chrUextra 12953572 12953698 -16050958 - MICROPIA_LTR LTR Gypsy -349 127 1 9 683 4913 10 0 3 chrUextra 12953698 12954295 -16050361 - MICROPIA_I LTR Gypsy 0 4476 3882 9 683 261 43 43 0 chrUextra 12954404 12954450 -16050206 - SAR_DM Satellite Satellite -1045 427 380 9 683 3755 33 54 3 chrUextra 12954459 12955137 -16049519 + DOC2_DM LINE Jockey 7 738 -4055 9 683 3485 43 0 222 chrUextra 12955253 12955970 -16048686 + BATUMI_I LTR Pao 4180 4737 -3226 9 683 6316 1 0 1 chrUextra 12956070 12956803 -16047853 - DOC LINE Jockey -169 4556 3825 9 683 1036 29 0 0 chrUextra 12956903 12957041 -16047615 - NTS_DM Other Other -65 175 38 9 683 870 9 0 27 chrUextra 12957041 12957153 -16047503 - NTS_DM Other Other -107 133 25 9 683 22 56 0 0 chrUextra 12957179 12957215 -16047441 + AT_rich Low_complexity Low_complexity 1 36 0 9 683 255 125 0 0 chrUextra 12957228 12957268 -16047388 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 246 150 0 0 chrUextra 12957311 12957351 -16047305 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 246 150 0 0 chrUextra 12957403 12957443 -16047213 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 246 150 0 0 chrUextra 12957495 12957535 -16047121 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 22 56 0 0 chrUextra 12957540 12957576 -16047080 + AT_rich Low_complexity Low_complexity 1 36 0 9 683 6221 9 15 0 chrUextra 12957736 12958469 -16046187 - Invader1_I LTR Gypsy -1506 1680 937 9 683 6091 4 0 0 chrUextra 12958582 12959302 -16045354 + DMRT1B LINE R1 885 1604 -3579 9 683 29 47 0 0 chrUextra 12959554 12959597 -16045059 + AT_rich Low_complexity Low_complexity 1 43 0 9 683 2225 15 4 11 chrUextra 12960235 12960512 -16044144 + BATUMI_I LTR Pao 6727 7001 -962 9 683 3592 14 0 5 chrUextra 12960538 12960968 -16043688 - BATUMI_I LTR Pao -1543 6420 5993 9 683 5137 2 0 0 chrUextra 12961068 12961652 -16043004 - SSU-rRNA_Dme rRNA rRNA -1411 584 1 9 683 410 0 20 0 chrUextra 12961749 12961799 -16042857 + (TA)n Simple_repeat Simple_repeat 1 51 0 9 683 6396 0 0 1 chrUextra 12961901 12962634 -16042022 + DOC LINE Jockey 3656 4387 -338 9 683 3597 48 15 0 chrUextra 12963567 12964042 -16040614 - TART LINE telomeric -11951 2526 2045 9 683 1869 60 79 0 chrUextra 12964033 12964300 -16040356 - TART LINE telomeric -12618 1859 1572 9 683 1427 46 5 0 chrUextra 12965237 12965434 -16039222 - ZAM_I LTR Gypsy -6493 997 800 9 683 2198 11 0 78 chrUextra 12965435 12965742 -16038914 + DM176_LTR LTR Gypsy 1 283 -224 9 683 1777 22 18 0 chrUextra 12965743 12965966 -16038690 + DM176_LTR LTR Gypsy 251 477 -30 9 683 6060 26 0 1 chrUextra 12966066 12966799 -16037857 + MAX_I LTR Pao 3893 4624 -3290 9 683 6327 3 1 0 chrUextra 12966902 12967632 -16037024 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1902 9 683 3181 169 16 11 chrUextra 12967732 12968462 -16036194 - SAR_DM Satellite Satellite -515 957 224 9 683 1308 0 0 0 chrUextra 12968565 12968720 -16035936 + DM176_I LTR Gypsy 6266 6420 0 9 683 4289 4 0 2 chrUextra 12968720 12969228 -16035428 + DM176_LTR LTR Gypsy 1 507 0 9 683 572 0 0 0 chrUextra 12969230 12969298 -16035358 + ACCORD_LTR LTR Gypsy 432 499 -59 9 683 3814 2 0 0 chrUextra 12969398 12969845 -16034811 + FW_DM LINE Jockey 4246 4692 0 9 683 2279 11 0 0 chrUextra 12969859 12970131 -16034525 - R1_DM LINE R1 -311 5045 4774 9 683 21 95 0 0 chrUextra 12970327 12970390 -16034266 + AT_rich Low_complexity Low_complexity 1 63 0 9 683 4422 4 0 45 chrUextra 12970402 12970964 -16033692 + LSU-rRNA_Dme rRNA rRNA 1 537 -3363 9 683 1265 144 97 11 chrUextra 12971067 12971334 -16033322 - MDG1_LTR LTR Gypsy -64 378 89 9 683 1620 20 0 7 chrUextra 12971336 12971797 -16032859 + (TTA)n Simple_repeat Simple_repeat 1 458 0 9 683 6106 9 1 1 chrUextra 12971897 12972630 -16032026 + R1_DM LINE R1 3372 4104 -1252 9 683 319 361 16 37 chrUextra 12972823 12973225 -16031431 - Gypsy6_I LTR Gypsy -5228 1784 1344 9 683 284 26 26 0 chrUextra 12975229 12975267 -16029389 - NTS_DM Other Other -201 39 1 9 683 1704 21 17 21 chrUextra 12975267 12975508 -16029148 - NTS_DM Other Other 0 240 1 9 683 1756 17 17 17 chrUextra 12975508 12975748 -16028908 - NTS_DM Other Other 0 240 1 9 683 1515 19 19 19 chrUextra 12975748 12975962 -16028694 - NTS_DM Other Other 0 240 27 9 85 6097 0 3 0 chrUextra 12976062 12976795 -16027861 - TABOR_I LTR Gypsy -4835 1501 767 9 684 5995 29 1 0 chrUextra 12976895 12977628 -16027028 - R1_DM LINE R1 -3244 2112 1379 9 684 2483 43 17 150 chrUextra 12978561 12979022 -16025634 - Gypsy6_I LTR Gypsy -6612 400 1 9 684 1989 60 7 2 chrUextra 12979022 12979294 -16025362 - Gypsy6A_LTR LTR Gypsy 0 420 145 9 684 1176 0 0 0 chrUextra 12979556 12979691 -16024965 + 5S_DM RNA RNA 1 135 0 9 684 1157 15 0 0 chrUextra 12979922 12980057 -16024599 + 5S_DM RNA RNA 1 135 0 9 684 5515 31 1 1 chrUextra 12980227 12980960 -16023696 - IDEFIX_I LTR Gypsy -159 5469 4737 9 684 28 48 0 0 chrUextra 12981335 12981377 -16023279 + AT_rich Low_complexity Low_complexity 1 42 0 9 684 32 0 0 0 chrUextra 12981705 12981737 -16022919 + AT_rich Low_complexity Low_complexity 1 32 0 9 684 6104 11 0 0 chrUextra 12981893 12982626 -16022030 + STALKER4_I LTR Gypsy 3247 3979 -2551 9 684 908 60 3 17 chrUextra 12982726 12983459 -16021197 + RSP Satellite Satellite 1 722 0 9 684 23 68 0 0 chrUextra 12983579 12983623 -16021033 + AT_rich Low_complexity Low_complexity 1 44 0 9 684 1759 33 0 0 chrUextra 12984079 12984292 -16020364 - PROTOP DNA P 0 4480 4268 9 684 3066 185 16 21 chrUextra 12984396 12985121 -16019535 + SAR_DM Satellite Satellite 1 721 -208 9 684 5015 16 2 2 chrUextra 12986058 12986669 -16017987 - R1_DM LINE R1 -1448 3908 3298 9 684 972 32 0 0 chrUextra 12986667 12986791 -16017865 - R1_DM LINE R1 -2425 2931 2808 9 684 6067 15 1 1 chrUextra 12986893 12987624 -16017032 - R1_DM LINE R1 -1485 3871 3141 9 684 3017 177 15 23 chrUextra 12987724 12988457 -16016199 + SAR_DM Satellite Satellite 427 1153 -319 9 684 28 48 0 0 chrUextra 12988898 12988940 -16015716 + AT_rich Low_complexity Low_complexity 1 42 0 9 684 5964 20 9 1 chrUextra 12989390 12990123 -16014533 + FW_DM LINE Jockey 2377 3115 -1577 9 684 2150 0 0 0 chrUextra 12990223 12990467 -16014189 - R2_DM LINE R2 -1443 2164 1921 9 684 389 61 0 0 chrUextra 12990464 12990513 -16014143 - LSU-rRNA_Dme rRNA rRNA -1274 2626 2578 9 684 3867 0 0 2 chrUextra 12990511 12990956 -16013700 - R2_DM LINE R2 0 3607 3164 9 684 6257 8 0 0 chrUextra 12991056 12991789 -16012867 - R1_DM LINE R1 -39 5317 4585 9 684 2993 172 29 15 chrUextra 12991892 12992619 -16012037 - SAR_DM Satellite Satellite -512 960 224 9 684 233 238 49 10 chrUextra 12992765 12992867 -16011789 - MDG1_I LTR Gypsy -4743 1853 1748 9 684 5879 4 0 45 chrUextra 12993555 12994288 -16010368 + MICROPIA_I LTR Gypsy 1315 2014 -2462 9 684 6095 1 1 1 chrUextra 12995251 12995954 -16008702 - SSU-rRNA_Dme rRNA rRNA 0 1995 1293 9 684 445 183 11 0 chrUextra 12996307 12996400 -16008256 + Gypsy12A_LTR LTR Gypsy 2 95 -2185 9 684 590 24 146 0 chrUextra 12996401 12996483 -16008173 + PROTOP_B DNA P 1 94 -1059 9 684 2196 46 7 13 chrUextra 12996479 12996787 -16007869 + PROTOP_B DNA P 224 529 -624 9 684 6049 7 22 0 chrUextra 12996887 12997620 -16007036 + Invader2_I LTR Gypsy 294 1042 -3550 9 684 470 294 60 53 chrUextra 12997732 12998278 -16006378 - SAR_DM Satellite Satellite -694 778 229 9 684 6166 1 0 0 chrUextra 12998553 12999286 -16005370 - Invader2_I LTR Gypsy -1880 2712 1980 9 684 34 24 0 0 chrUextra 13000007 13000048 -16004608 + AT_rich Low_complexity Low_complexity 1 41 0 9 684 326 86 671 15 chrUextra 13000219 13000349 -16004307 + HMSBEAGLE_I LTR Gypsy 3 221 -6308 9 684 6253 1 1 0 chrUextra 13001052 13001785 -16002871 + ROO_I LTR Pao 1220 1953 -6303 9 684 3301 167 8 8 chrUextra 13001901 13002609 -16002047 - SAR_DM Satellite Satellite -396 1076 369 9 684 21 57 0 0 chrUextra 13002769 13002804 -16001852 + AT_rich Low_complexity Low_complexity 1 35 0 9 684 1545 37 0 0 chrUextra 13003260 13003451 -16001205 - PROTOP DNA P 0 4480 4290 9 684 2941 6 8 8 chrUextra 13003551 13003917 -16000739 + DM297_LTR LTR Gypsy 49 414 0 9 684 2666 16 5 3 chrUextra 13003917 13004284 -16000372 + DM297_I LTR Gypsy 1 368 -5799 9 684 2726 190 12 20 chrUextra 13004384 13005117 -15999539 - SAR_DM Satellite Satellite -638 727 1 9 684 2957 203 13 18 chrUextra 13006054 13006783 -15997873 - SAR_DM Satellite Satellite -593 724 1 9 684 5095 0 2 0 chrUextra 13006883 13007464 -15997192 + LSU-rRNA_Dme rRNA rRNA 3319 3900 0 9 684 27 29 0 0 chrUextra 13007536 13007570 -15997086 + AT_rich Low_complexity Low_complexity 1 34 0 9 684 868 309 31 28 chrUextra 13007716 13008424 -15996232 - SAR_DM Satellite Satellite -428 1044 335 9 684 6277 0 4 3 chrUextra 13008549 13009282 -15995374 + SSU-rRNA_Dme rRNA rRNA 758 1491 -504 9 684 6276 9 0 0 chrUextra 13009382 13010115 -15994541 + DOC2_DM LINE Jockey 3538 4270 -523 9 684 2939 179 19 26 chrUextra 13010218 13010948 -15993708 + SAR_DM Satellite Satellite 1 725 -208 9 684 4725 21 0 0 chrUextra 13011050 13011623 -15993033 - PROTOP DNA P -3909 571 1 9 684 1266 13 0 0 chrUextra 13011623 13011780 -15992876 - QUASIMODO_I LTR Gypsy -4488 1572 1416 9 684 925 16 8 0 chrUextra 13012714 13012837 -15991819 + Copia2_I LTR Copia 4039 4162 0 9 684 1699 0 0 0 chrUextra 13012837 13013035 -15991621 + Copia2_LTR_DM LTR Copia 1 198 0 9 684 983 68 34 0 chrUextra 13013035 13013182 -15991474 + QUASIMODO_I LTR Gypsy 5024 5175 -885 9 684 1688 30 0 0 chrUextra 13013193 13013428 -15991228 + QUASIMODO_I LTR Gypsy 5493 5727 -333 9 684 3097 177 16 10 chrUextra 13013547 13014276 -15990380 - SAR_DM Satellite Satellite -515 957 224 9 684 5393 0 0 0 chrUextra 13014380 13015020 -15989636 - HMSBEAGLE_I LTR Gypsy -5889 640 1 9 684 783 11 0 0 chrUextra 13015019 13015113 -15989543 - DMLTR5 LTR Gypsy 0 266 173 9 684 6361 0 0 0 chrUextra 13015213 13015946 -15988710 + DMRT1B LINE R1 3502 4234 -949 9 684 3196 176 8 10 chrUextra 13016879 13017609 -15987047 + SAR_DM Satellite Satellite 195 923 -549 9 684 3057 0 0 0 chrUextra 13017712 13018058 -15986598 - ROO_LTR LTR Pao -82 346 1 9 684 2225 0 4 0 chrUextra 13018545 13018803 -15985853 + Gypsy12_I LTR Gypsy 5288 5546 0 9 684 4184 0 0 0 chrUextra 13018803 13019277 -15985379 + Gypsy12_LTR LTR Gypsy 1 474 -1862 9 684 2898 200 14 20 chrUextra 13019377 13020109 -15984547 - SAR_DM Satellite Satellite -602 727 1 9 684 2025 0 0 0 chrUextra 13020463 13020703 -15983953 - ALUII_DM Unknown Unknown 0 240 1 9 684 21 57 0 0 chrUextra 13020703 13020738 -15983918 + AT_rich Low_complexity Low_complexity 1 35 0 9 684 3143 180 6 8 chrUextra 13021049 13021760 -15982896 - SAR_DM Satellite Satellite -569 903 195 9 684 612 123 0 0 chrUextra 13021667 13021773 -15982883 + ARS406_DM Unknown Unknown 1 106 -247 9 684 585 0 0 0 chrUextra 13021873 13021940 -15982716 + LSU-rRNA_Dme rRNA rRNA 3834 3900 0 9 684 22 56 0 0 chrUextra 13022012 13022048 -15982608 + AT_rich Low_complexity Low_complexity 1 36 0 9 684 246 150 0 0 chrUextra 13022053 13022093 -15982563 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 246 150 0 0 chrUextra 13022145 13022185 -15982471 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 246 150 0 0 chrUextra 13022237 13022277 -15982379 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 255 125 0 0 chrUextra 13022320 13022360 -15982296 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 22 56 0 0 chrUextra 13022373 13022409 -15982247 + AT_rich Low_complexity Low_complexity 1 36 0 9 684 840 9 0 35 chrUextra 13022435 13022548 -15982108 + NTS_DM Other Other 25 133 -107 9 684 455 0 0 18 chrUextra 13022548 13022605 -15982051 + NTS_DM Other Other 38 93 -147 9 684 3016 169 30 21 chrUextra 13022711 13023437 -15981219 + SAR_DM Satellite Satellite 191 923 -549 9 684 22 35 0 0 chrUextra 13023640 13023669 -15980987 + AT_rich Low_complexity Low_complexity 1 29 0 9 684 21 57 0 0 chrUextra 13023866 13023901 -15980755 + AT_rich Low_complexity Low_complexity 1 35 0 9 684 1985 8 0 0 chrUextra 13023901 13024141 -15980515 + ALUII_DM Unknown Unknown 1 240 0 9 684 25 75 0 0 chrUextra 13024184 13024237 -15980419 + AT_rich Low_complexity Low_complexity 1 53 0 9 684 2800 87 0 2 chrUextra 13024476 13024879 -15979777 + Jockey2 LINE Jockey 1419 1820 -1608 9 684 498 53 620 2 chrUextra 13024887 13025098 -15979558 - PROTOP_B DNA P -297 856 472 9 684 4309 25 96 15 chrUextra 13025201 13025931 -15978725 - ACCORD2_I LTR Gypsy -4861 2351 1563 9 684 6143 0 3 3 chrUextra 13026033 13026765 -15977891 + ROO_I LTR Pao 1793 2524 -5732 9 684 1218 164 4 0 chrUextra 13026865 13027127 -15977529 - ROVER-I_DM LTR Gypsy -332 6252 5990 9 684 2314 161 5 0 chrUextra 13027162 13027597 -15977059 - ROVER-I_DM LTR Gypsy -1276 5308 4872 9 684 6118 1 0 1 chrUextra 13027697 13028429 -15976227 + ROO_I LTR Pao 2810 3540 -4716 9 684 6217 4 0 0 chrUextra 13028529 13029261 -15975395 - ROVER-I_DM LTR Gypsy -2217 4367 3636 9 684 6136 6 0 0 chrUextra 13029361 13030092 -15974564 - QUASIMODO_I LTR Gypsy -2534 3526 2796 9 684 22 0 0 0 chrUextra 13030414 13030436 -15974220 + AT_rich Low_complexity Low_complexity 1 22 0 9 684 291 232 0 0 chrUextra 13030708 13030777 -15973879 + BS2 LINE Jockey 4146 4214 -507 9 684 3051 8 0 0 chrUextra 13031025 13031416 -15973240 + QUASIMODO_I LTR Gypsy 5670 6060 0 9 684 2823 0 6 0 chrUextra 13031416 13031757 -15972899 + QUASIMODO_LTR LTR Gypsy 1 343 -315 9 684 4929 70 3 0 chrUextra 13031858 13032583 -15972073 + I_DM LINE I 4662 5388 -843 9 684 28 48 0 0 chrUextra 13032911 13032953 -15971703 + AT_rich Low_complexity Low_complexity 1 42 0 9 684 32 0 0 0 chrUextra 13033282 13033314 -15971342 + AT_rich Low_complexity Low_complexity 1 32 0 9 684 6278 4 0 0 chrUextra 13034353 13035085 -15969571 - R1_DM LINE R1 -3331 2025 1294 9 684 1028 85 80 0 chrUextra 13035195 13035371 -15969285 - TART_B1 LINE telomeric -8156 2498 2309 9 684 3570 5 0 0 chrUextra 13035406 13035817 -15968839 - DMRT1B LINE R1 0 5183 4773 9 684 466 146 0 0 chrUextra 13035812 13035915 -15968741 - TART_B1 LINE telomeric -8863 1791 1689 9 684 5558 13 45 37 chrUextra 13036017 13036749 -15967907 - CIRCE LINE Composite -5402 954 217 9 684 5896 20 0 0 chrUextra 13036851 13037581 -15967075 + STALKER4_I LTR Gypsy 3175 3904 -2626 9 684 4020 86 21 3 chrUextra 13037685 13038335 -15966321 - FW_DM LINE Jockey -962 3730 2544 9 684 658 13 0 0 chrUextra 13038335 13038413 -15966243 + STALKER4_LTR LTR Gypsy 1 78 -324 9 684 4592 21 77 0 chrUextra 13038513 13039245 -15965411 - R1_DM LINE R1 -88 5268 4481 9 684 4317 21 0 0 chrUextra 13039345 13039866 -15964790 - R1_DM LINE R1 -1561 3795 3275 9 684 1658 24 0 5 chrUextra 13039869 13040077 -15964579 - R1_DM LINE R1 -2214 3142 2936 9 684 6191 10 6 0 chrUextra 13040177 13040909 -15963747 + IVK_DM LINE I 3598 4333 -1069 9 684 6298 1 0 0 chrUextra 13041009 13041725 -15962931 - SSU-rRNA_Dme rRNA rRNA -1279 716 1 9 684 3766 0 0 0 chrUextra 13041872 13042300 -15962356 - ROO_LTR LTR Pao 0 428 1 9 684 2206 0 4 0 chrUextra 13042300 13042573 -15962083 - ROO_I LTR Pao 0 8256 7983 9 684 1908 209 36 57 chrUextra 13042676 13043225 -15961431 - Gypsy12_LTR LTR Gypsy -1786 550 13 9 684 931 88 117 12 chrUextra 13043243 13043405 -15961251 - Gypsy12_I LTR Gypsy -5 5541 5363 9 684 6144 14 1 0 chrUextra 13043505 13044237 -15960419 + Copia2_I LTR Copia 982 1714 -2448 9 684 6241 1 0 0 chrUextra 13044337 13045069 -15959587 + DM297_I LTR Gypsy 292 1023 -5144 9 684 5306 0 0 39 chrUextra 13045230 13045901 -15958755 + LSU-rRNA_Dme rRNA rRNA 1 645 -3255 9 684 2602 85 22 16 chrUextra 13046002 13046730 -15957926 + DMSAT6 Satellite Satellite 1 732 -97 9 684 6062 20 0 0 chrUextra 13046833 13047565 -15957091 + ROO_I LTR Pao 2312 3043 -5213 9 684 4063 28 79 1 chrUextra 13047665 13048397 -15956259 + R1_DM LINE R1 4150 4938 -418 9 684 5324 5 3 0 chrUextra 13048497 13049101 -15955555 + SSU-rRNA_Dme rRNA rRNA 89 694 -1301 9 684 1062 8 8 0 chrUextra 13049101 13049229 -15955427 + TRANSPAC_LTR LTR Gypsy 1 129 -201 9 684 2343 17 8 6 chrUextra 13049329 13049684 -15954972 + Stalker2_I LTR Gypsy 7047 7402 0 9 684 2765 3 0 3 chrUextra 13049684 13050010 -15954646 + Stalker2_LTR LTR Gypsy 100 424 0 9 684 201 0 122 0 chrUextra 13050012 13050061 -15954595 + (GA)n Simple_repeat Simple_repeat 2 56 0 9 684 5972 26 4 0 chrUextra 13050161 13050893 -15953763 - R1_DM LINE R1 -1686 3670 2936 9 684 5831 19 4 8 chrUextra 13050993 13051725 -15952931 - R1_DM LINE R1 -1382 3974 3246 9 684 4367 85 109 11 chrUextra 13051825 13052557 -15952099 + Gypsy12_I LTR Gypsy 4424 5227 -319 9 684 2264 26 0 0 chrUextra 13052657 13052930 -15951726 - CIRCE LINE Composite -6083 273 1 9 684 3707 33 17 0 chrUextra 13052930 13053389 -15951267 - CIRCE LINE Composite 0 6356 5890 9 684 5108 1 25 34 chrUextra 13053492 13054221 -15950435 + ROVER-I_DM LTR Gypsy 225 946 -5638 9 684 6248 10 0 4 chrUextra 13054321 13055053 -15949603 - BATUMI_I LTR Pao -2097 5866 5138 9 684 2069 175 11 7 chrUextra 13055153 13055883 -15948773 + SAR_DM Satellite Satellite 1 732 -656 9 684 3386 192 11 25 chrUextra 13055985 13056712 -15947944 - SAR_DM Satellite Satellite -542 717 1 9 684 321 232 0 0 chrUextra 13057014 13057083 -15947573 - BS2 LINE Jockey -507 4214 4146 9 684 22 0 0 0 chrUextra 13057357 13057379 -15947277 + AT_rich Low_complexity Low_complexity 1 22 0 9 684 6702 3 1 3 chrUextra 13057649 13058381 -15946275 - SSU-rRNA_Dme rRNA rRNA -671 1324 594 9 684 1004 157 22 82 chrUextra 13058481 13058715 -15945941 - HETA LINE telomeric -1819 4262 4075 9 684 745 11 0 22 chrUextra 13058668 13058758 -15945898 + TRANSIB2 DNA Transib 2757 2844 0 9 684 1120 16 0 0 chrUextra 13058827 13058950 -15945706 - ROVER-I_DM LTR Gypsy -6461 123 1 9 684 2170 12 8 34 chrUextra 13058950 13059213 -15945443 - ROVER-LTR_DM LTR Gypsy 0 367 112 9 684 6165 34 8 0 chrUextra 13059314 13060045 -15944611 + R1_DM LINE R1 2195 2931 -2425 9 684 1906 180 24 23 chrUextra 13060145 13060875 -15943781 - SAR_DM Satellite Satellite -504 731 1 9 684 27 29 0 0 chrUextra 13062078 13062112 -15942544 + AT_rich Low_complexity Low_complexity 1 34 0 9 684 265 91 0 0 chrUextra 13062351 13062384 -15942272 + Baggins1 LINE LOA 4727 4759 -694 9 684 769 103 241 0 chrUextra 13062389 13062534 -15942122 + FB4_DM DNA Tc1 3908 4087 -2 9 684 6248 23 12 0 chrUextra 13062641 13063373 -15941283 - R1_DM LINE R1 -1789 3567 2827 9 684 3509 5 8 2 chrUextra 13063473 13063871 -15940785 + LSU-rRNA_Dme rRNA rRNA 1392 1791 -2109 9 684 2706 0 3 0 chrUextra 13063912 13064203 -15940453 + LSU-rRNA_Dme rRNA rRNA 1788 2079 -1821 9 684 6576 14 0 0 chrUextra 13064305 13065037 -15939619 - Copia2_I LTR Copia -2198 1964 1233 9 684 5680 49 87 0 chrUextra 13065137 13065869 -15938787 + Baggins1 LINE LOA 4475 5270 -183 9 684 5594 3 0 0 chrUextra 13065969 13066577 -15938079 + QUASIMODO_LTR LTR Gypsy 51 658 0 9 684 247 28 0 100 chrUextra 13066590 13066630 -15938026 - DNAREP1_DM LINE Penelope -135 459 424 9 684 1050 330 35 36 chrUextra 13066815 13067513 -15937143 - Copia2_I LTR Copia -2013 2149 1386 9 684 6631 16 0 0 chrUextra 13067633 13068365 -15936291 + Invader1_I LTR Gypsy 474 1205 -1981 9 684 6412 19 0 18 chrUextra 13069297 13070029 -15934627 + Gypsy6_I LTR Gypsy 5027 5745 -1267 9 684 6407 8 1 0 chrUextra 13070129 13070861 -15933795 - G6_DM LINE Jockey -1224 818 86 9 684 6649 3 1 0 chrUextra 13070961 13071693 -15932963 - R1_DM LINE R1 -1610 3746 3014 9 684 2711 87 8 23 chrUextra 13071793 13072525 -15932131 - DMSAT6 Satellite Satellite -35 721 1 9 684 6530 3 0 0 chrUextra 13072625 13073347 -15931309 - LSU-rRNA_Dme rRNA rRNA -2961 939 218 9 684 6258 0 1 34 chrUextra 13073457 13074189 -15930467 + LSU-rRNA_Dme rRNA rRNA 10 717 -3183 9 684 593 148 38 58 chrUextra 13074289 13074589 -15930067 + QUASIMODO_LTR LTR Gypsy 180 643 -15 9 684 532 250 20 20 chrUextra 13074824 13075020 -15929636 + TV1I LTR Gypsy 712 907 -5056 9 684 6701 8 0 1 chrUextra 13075121 13075853 -15928803 + Gypsy4_I LTR Gypsy 779 1509 -4779 9 684 638 130 9 0 chrUextra 13075954 13076062 -15928594 - SAR_DM Satellite Satellite -825 647 539 9 684 1050 179 32 19 chrUextra 13076073 13076685 -15927971 - SAR_DM Satellite Satellite -683 619 1 9 684 494 34 0 0 chrUextra 13076936 13076995 -15927661 + DM176_LTR LTR Gypsy 225 283 -224 9 684 2171 30 15 4 chrUextra 13076979 13077249 -15927407 + DM176_LTR LTR Gypsy 179 507 0 9 684 698 158 79 94 chrUextra 13077252 13077517 -15927139 - MAX_I LTR Pao -7390 524 264 9 684 3475 186 14 8 chrUextra 13077617 13078349 -15926307 + SAR_DM Satellite Satellite 267 1002 -470 9 684 3464 170 14 19 chrUextra 13078449 13079174 -15925482 - SAR_DM Satellite Satellite -572 900 180 9 684 4298 34 49 153 chrUextra 13079281 13080013 -15924643 + CIRCE LINE Composite 1012 1667 -4689 9 684 5460 72 0 1 chrUextra 13080113 13080845 -15923811 - I_DM LINE I -1495 4736 4006 9 684 6696 1 0 1 chrUextra 13080945 13081677 -15922979 - ROO_I LTR Pao -6558 1698 968 9 684 5332 105 0 0 chrUextra 13081778 13082509 -15922147 + HETA LINE telomeric 2312 3042 -3039 9 684 6590 4 0 0 chrUextra 13082609 13083341 -15921315 - FW_DM LINE Jockey -1363 3329 2598 9 684 1350 160 89 81 chrUextra 13083444 13083809 -15920847 + Gypsy12_LTR LTR Gypsy 1220 1597 -683 9 684 207 0 0 0 chrUextra 13083809 13083832 -15920824 + (TAA)n Simple_repeat Simple_repeat 3 25 0 9 684 497 206 144 65 chrUextra 13083832 13083918 -15920738 + Gypsy12_LTR LTR Gypsy 1598 1678 -602 9 684 1925 69 23 0 chrUextra 13083911 13084173 -15920483 - IVK_DM LINE I -2 5400 5133 9 684 5736 26 23 8 chrUextra 13084273 13085005 -15919651 - PROTOP DNA P -3504 976 234 9 684 6587 0 0 1 chrUextra 13085105 13085837 -15918819 + ROO_I LTR Pao 2930 3660 -4596 9 684 6057 1 0 1 chrUextra 13085937 13086619 -15918037 + STALKER4_I LTR Gypsy 2940 3620 -2910 9 684 484 33 17 0 chrUextra 13086606 13086666 -15917990 + STALKER4_I LTR Gypsy 4662 4722 -1808 9 684 6306 30 3 3 chrUextra 13086769 13087501 -15917155 - DMCR1A LINE CR1 -2363 2107 1376 9 684 3393 168 30 21 chrUextra 13087604 13088333 -15916323 - SAR_DM Satellite Satellite -361 1111 376 9 684 6438 27 1 1 chrUextra 13088433 13089165 -15915491 + DIVER_I LTR Pao 1857 2588 -3055 9 684 3086 46 65 36 chrUextra 13089265 13089741 -15914915 + PROTOP_B DNA P 447 936 -217 9 684 313 50 0 0 chrUextra 13089734 13089794 -15914862 + PROTOP_B DNA P 572 631 -522 9 684 1417 57 15 25 chrUextra 13089799 13089997 -15914659 + PROTOP_B DNA P 794 989 -164 9 684 3182 6 0 3 chrUextra 13090100 13090449 -15914207 - T412LTR LTR LTR -133 348 1 9 684 4277 2 0 0 chrUextra 13090339 13090829 -15913827 - DM412 LTR Gypsy 0 6897 6408 9 684 6173 37 0 1 chrUextra 13090933 13091661 -15912995 + DIVER_I LTR Pao 3488 4214 -1429 9 684 2557 7 3 0 chrUextra 13091761 13092044 -15912612 + DIVER_I LTR Pao 848 1131 -4512 9 684 4061 7 0 0 chrUextra 13092049 13092493 -15912163 + R2_DM LINE R2 2676 3119 -488 9 684 6578 1 1 1 chrUextra 13092593 13093325 -15911331 - R1_DM LINE R1 -3811 1545 814 9 684 6123 28 4 10 chrUextra 13093426 13094157 -15910499 - BATUMI_I LTR Pao -5424 2539 1813 9 684 2425 93 45 44 chrUextra 13094257 13094989 -15909667 - DMSAT6 Satellite Satellite -29 733 1 9 684 6635 3 0 1 chrUextra 13095089 13095821 -15908835 + STALKER4_I LTR Gypsy 3316 4046 -2484 9 684 1508 16 99 0 chrUextra 13095921 13096103 -15908553 - PROTOP DNA P -4280 200 1 9 684 3594 162 13 10 chrUextra 13096776 13097482 -15907174 - SAR_DM Satellite Satellite -396 1076 369 9 684 2118 13 0 0 chrUextra 13097585 13097820 -15906836 - DM176_I LTR Gypsy -1194 5226 4992 9 684 4119 18 12 20 chrUextra 13097811 13098312 -15906344 - DM176_I LTR Gypsy -5453 967 471 9 684 980 21 28 28 chrUextra 13098417 13098562 -15906094 + NTS_DM Other Other 96 240 0 9 684 1887 21 17 17 chrUextra 13098562 13098802 -15905854 + NTS_DM Other Other 1 240 0 9 684 1899 17 17 17 chrUextra 13098802 13099042 -15905614 + NTS_DM Other Other 1 240 0 9 684 950 9 9 0 chrUextra 13099042 13099149 -15905507 + NTS_DM Other Other 1 108 -132 9 684 537 250 43 32 chrUextra 13099250 13099436 -15905220 + MICROPIA_I LTR Gypsy 3130 3317 -1159 9 684 416 307 0 0 chrUextra 13099483 13099610 -15905046 + MICROPIA_I LTR Gypsy 3668 3794 -682 9 684 373 299 101 9 chrUextra 13099696 13099909 -15904747 + MICROPIA_I LTR Gypsy 3434 3850 -626 9 684 2726 90 20 8 chrUextra 13100081 13100813 -15903843 - DMSAT6 Satellite Satellite -8 740 1 9 684 3224 188 31 23 chrUextra 13100913 13101645 -15903011 + SAR_DM Satellite Satellite 1 737 -202 9 684 405 184 248 0 chrUextra 13101746 13101855 -15902801 - HMSBEAGLE_I LTR Gypsy -607 5922 5787 9 684 2088 111 25 0 chrUextra 13101857 13102172 -15902484 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 9 684 2016 113 20 0 chrUextra 13102185 13102477 -15902179 - HMSBEAGLE_I LTR Gypsy -3356 3173 2876 9 684 3581 21 100 6 chrUextra 13102577 13103309 -15901347 - R1_DM LINE R1 -1259 4097 3297 9 684 4741 13 0 0 chrUextra 13103409 13103942 -15900714 + G2_DM LINE Jockey 2564 3096 -6 9 684 1366 42 19 116 chrUextra 13103926 13104141 -15900515 + LSU-rRNA_Dme rRNA rRNA 103 296 -3604 9 684 709 0 0 0 chrUextra 13104241 13104318 -15900338 - NTS_DM Other Other -126 114 38 9 684 848 18 0 44 chrUextra 13104318 13104432 -15900224 - NTS_DM Other Other -107 133 25 9 684 1350 18 0 6 chrUextra 13104484 13104649 -15900007 - NTS_DM Other Other -39 201 38 9 684 936 9 0 27 chrUextra 13104649 13104761 -15899895 - NTS_DM Other Other -107 133 25 9 684 22 56 0 0 chrUextra 13104787 13104823 -15899833 + AT_rich Low_complexity Low_complexity 1 36 0 9 684 278 176 0 19 chrUextra 13104836 13104888 -15899768 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 684 268 196 0 19 chrUextra 13104919 13104971 -15899685 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 684 2912 221 8 8 chrUextra 13105085 13105805 -15898851 - DM297_I LTR Gypsy -1433 4734 4015 9 684 6122 29 0 12 chrUextra 13105905 13106637 -15898019 + R1_DM LINE R1 2579 3301 -2055 9 85 6697 1 0 1 chrUextra 13106737 13107469 -15897187 + DOC LINE Jockey 1990 2720 -2005 9 685 6745 1 0 0 chrUextra 13107569 13108301 -15896355 - ROO_I LTR Pao -2640 5616 4885 9 685 2322 171 156 56 chrUextra 13109261 13109955 -15894701 - Gypsy12_LTR LTR Gypsy -68 2268 1506 9 685 6371 1 0 3 chrUextra 13110065 13110797 -15893859 - DM412 LTR Gypsy -100 6797 6068 9 685 5833 44 41 7 chrUextra 13110897 13111629 -15893027 - R1_DM LINE R1 -3668 1688 932 9 685 183 129 0 0 chrUextra 13111890 13111921 -15892735 + (TC)n Simple_repeat Simple_repeat 1 31 0 9 685 6134 12 16 0 chrUextra 13112561 13113293 -15891363 + Invader2_I LTR Gypsy 49 792 -3800 9 685 4851 55 67 15 chrUextra 13113393 13114108 -15890548 - QUASIMODO_I LTR Gypsy -1063 4997 4246 9 685 749 9 36 27 chrUextra 13114225 13114335 -15890321 + NTS_DM Other Other 130 240 0 9 685 1269 13 0 7 chrUextra 13114335 13114487 -15890169 + NTS_DM Other Other 1 151 -89 9 685 546 13 0 13 chrUextra 13114482 13114560 -15890096 + NTS_DM Other Other 75 151 -89 9 685 615 11 0 33 chrUextra 13114555 13114646 -15890010 + NTS_DM Other Other 75 162 -78 9 685 514 119 36 0 chrUextra 13114741 13114825 -15889831 + NTS_DM Other Other 4 90 -150 9 685 1381 7 0 0 chrUextra 13115889 13116041 -15888615 - ROO_I LTR Pao -8104 152 1 9 685 3901 0 0 2 chrUextra 13116041 13116470 -15888186 - ROO_LTR LTR Pao 0 428 1 9 685 558 121 33 73 chrUextra 13116470 13116621 -15888035 + HETA LINE telomeric 5045 5189 -892 9 685 5866 6 1 0 chrUextra 13116721 13117453 -15887203 + QUASIMODO_I LTR Gypsy 5159 5891 -169 9 685 2503 165 18 8 chrUextra 13117553 13118285 -15886371 + SAR_DM Satellite Satellite 1 739 -416 9 685 5255 45 35 0 chrUextra 13118385 13119066 -15885590 - TART LINE telomeric -11728 2749 2045 9 685 440 100 0 0 chrUextra 13119057 13119117 -15885539 - TART_B1 LINE telomeric -4317 6337 6278 9 685 6017 20 1 1 chrUextra 13119217 13119949 -15884707 + PROTOP_A DNA P 91 822 -283 9 685 3490 163 23 11 chrUextra 13120049 13120781 -15883875 + SAR_DM Satellite Satellite 332 1072 -400 9 685 3288 187 4 15 chrUextra 13120881 13121613 -15883043 + SAR_DM Satellite Satellite 376 1099 -373 9 685 639 14 0 0 chrUextra 13121713 13121785 -15882871 - CIRCE LINE Composite -3250 3106 3035 9 685 3593 63 4 24 chrUextra 13121786 13122445 -15882211 - CIRCE LINE Composite -3442 2914 2219 9 685 6563 4 0 0 chrUextra 13122546 13123277 -15881379 - BARI_DM DNA Tc1 -873 855 125 9 685 6595 7 0 0 chrUextra 13123377 13124109 -15880547 - R1_DM LINE R1 -607 4749 4018 9 685 1029 8 0 0 chrUextra 13124209 13124329 -15880327 + DM1731_I LTR Copia 3857 3976 0 9 685 2750 39 0 0 chrUextra 13124329 13124661 -15879995 + DM1731_LTR LTR Copia 1 332 -4 9 685 483 18 0 0 chrUextra 13124661 13124717 -15879939 + (TATAA)n Simple_repeat Simple_repeat 4 59 0 9 685 1620 0 0 0 chrUextra 13124735 13124941 -15879715 + (TATAA)n Simple_repeat Simple_repeat 1 206 0 9 685 2793 40 10 11 chrUextra 13125041 13125738 -15878918 - PROTOP DNA P -3225 1255 489 9 685 6254 10 0 12 chrUextra 13125873 13126605 -15878051 - R1_DM LINE R1 -4436 920 198 9 685 792 37 0 115 chrUextra 13126858 13126980 -15877676 + Baggins1 LINE LOA 5346 5453 0 9 685 6403 0 3 1 chrUextra 13127540 13128269 -15876387 - STALKER4_I LTR Gypsy -5212 1318 589 9 685 514 206 9 9 chrUextra 13128369 13128477 -15876179 + TAHRE LINE telomeric 9975 10082 -381 9 685 3879 21 174 2 chrUextra 13128473 13129101 -15875555 + DMRT1B LINE R1 199 934 -4249 9 685 6323 18 0 6 chrUextra 13129201 13129933 -15874723 - FW_DM LINE Jockey -49 4643 3916 9 685 6191 1 1 1 chrUextra 13130037 13130764 -15873892 - QUASIMODO_I LTR Gypsy -1493 4567 3841 9 685 1846 0 0 0 chrUextra 13130864 13131068 -15873588 - BARI_DM DNA Tc1 -1431 297 94 9 685 4709 13 0 0 chrUextra 13131056 13131595 -15873061 - BARI_DM DNA Tc1 -239 1489 951 9 685 5212 104 1 4 chrUextra 13131695 13132426 -15872230 + Gypsy12_I LTR Gypsy 1835 2563 -2983 9 685 5822 36 64 3 chrUextra 13132526 13133257 -15871399 + NINJA_I LTR Pao 4221 4996 -1015 9 685 6548 1 0 0 chrUextra 13133359 13134088 -15870568 + ROO_I LTR Pao 1011 1739 -6517 9 685 3216 181 23 10 chrUextra 13134188 13134917 -15869739 - SAR_DM Satellite Satellite -504 968 230 9 685 6516 1 1 6 chrUextra 13135019 13135750 -15868906 - SSU-rRNA_Dme rRNA rRNA -256 1739 1012 9 685 387 113 0 0 chrUextra 13135850 13135912 -15868744 + (CTG)n Simple_repeat Simple_repeat 1 62 0 9 685 5194 5 30 20 chrUextra 13135912 13136546 -15868110 - ROO_I LTR Pao -7616 640 1 9 685 287 29 0 0 chrUextra 13136546 13136581 -15868075 - ROO_LTR LTR Pao 0 428 394 9 685 347 202 0 21 chrUextra 13136681 13136777 -15867879 + XDMR_DM Unknown Unknown 267 360 0 9 685 3135 176 11 22 chrUextra 13136691 13137412 -15867244 - SAR_DM Satellite Satellite -354 1118 406 9 685 6291 16 36 0 chrUextra 13137512 13138243 -15866413 + R1_DM LINE R1 1782 2538 -2818 9 685 6297 21 12 0 chrUextra 13138343 13139070 -15865586 - CIRCE LINE Composite -193 6163 5428 9 685 23 0 0 0 chrUextra 13139186 13139209 -15865447 + AT_rich Low_complexity Low_complexity 1 23 0 9 685 356 167 42 92 chrUextra 13139443 13139562 -15865094 + Copia_I LTR Copia 4401 4513 -80 9 685 1535 0 0 15 chrUextra 13140005 13140266 -15864390 + (TTATA)n Simple_repeat Simple_repeat 1 257 0 9 685 2896 6 0 0 chrUextra 13140271 13140592 -15864064 - MAX_LTR LTR Pao 0 321 1 9 685 1292 0 0 0 chrUextra 13140592 13140736 -15863920 - MAX_I LTR Pao 0 7914 7771 9 685 3498 38 0 7 chrUextra 13140840 13141263 -15863393 - G2_DM LINE Jockey -1272 1830 1411 9 685 22 56 0 0 chrUextra 13141412 13141448 -15863208 + AT_rich Low_complexity Low_complexity 1 36 0 9 685 6337 15 19 1 chrUextra 13141667 13142398 -15862258 + ACCORD2_I LTR Gypsy 52 795 -6417 9 685 6243 18 22 0 chrUextra 13142498 13143229 -15861427 + FW_DM LINE Jockey 1198 1944 -2748 9 685 3190 175 18 21 chrUextra 13143333 13144058 -15860598 + SAR_DM Satellite Satellite 293 1015 -457 9 685 3081 187 7 11 chrUextra 13144167 13144882 -15859774 - SAR_DM Satellite Satellite -569 903 192 9 685 34 24 0 0 chrUextra 13145048 13145089 -15859567 + AT_rich Low_complexity Low_complexity 1 41 0 9 685 21 95 0 0 chrUextra 13145302 13145365 -15859291 + AT_rich Low_complexity Low_complexity 1 63 0 9 685 2682 3 3 72 chrUextra 13145377 13145722 -15858934 + LSU-rRNA_Dme rRNA rRNA 1 321 -3579 9 685 6289 14 1 4 chrUextra 13145822 13146552 -15858104 + STALKER4_I LTR Gypsy 4360 5087 -1443 9 685 22 35 0 0 chrUextra 13146658 13146687 -15857969 + AT_rich Low_complexity Low_complexity 1 29 0 9 685 254 192 41 0 chrUextra 13146884 13146957 -15857699 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 9 685 1786 0 15 0 chrUextra 13147484 13147690 -15856966 - R1_DM LINE R1 -5147 209 1 9 685 476 36 0 0 chrUextra 13147690 13147745 -15856911 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 9 685 4359 0 0 0 chrUextra 13147741 13148215 -15856441 - R2_DM LINE R2 -8 3599 3126 9 685 6285 12 0 0 chrUextra 13148318 13149046 -15855610 + BLOOD_I LTR Gypsy 2799 3526 -3087 9 685 1146 8 0 0 chrUextra 13149146 13149275 -15855381 - NTS_DM Other Other -111 129 1 9 685 1835 17 17 17 chrUextra 13149275 13149515 -15855141 - NTS_DM Other Other 0 240 1 9 685 1805 17 17 21 chrUextra 13149515 13149756 -15854900 - NTS_DM Other Other 0 240 1 9 685 651 77 33 33 chrUextra 13149756 13149877 -15854779 - NTS_DM Other Other 0 240 120 9 685 729 12 0 0 chrUextra 13150808 13150889 -15853767 - NTS_DM Other Other -159 81 1 9 685 1794 21 17 21 chrUextra 13150889 13151130 -15853526 - NTS_DM Other Other 0 240 1 9 685 1835 17 17 17 chrUextra 13151130 13151370 -15853286 - NTS_DM Other Other 0 240 1 9 685 1154 18 24 24 chrUextra 13151370 13151539 -15853117 - NTS_DM Other Other 0 240 72 9 685 669 28 36 36 chrUextra 13151639 13151750 -15852906 + NTS_DM Other Other 130 240 0 9 685 1835 17 17 17 chrUextra 13151750 13151990 -15852666 + NTS_DM Other Other 1 240 0 9 685 1824 21 17 17 chrUextra 13151990 13152230 -15852426 + NTS_DM Other Other 1 240 0 9 685 1204 14 0 0 chrUextra 13152230 13152370 -15852286 + NTS_DM Other Other 1 140 -100 9 685 1488 268 59 39 chrUextra 13152471 13153085 -15851571 - ROVER-I_DM LTR Gypsy -4568 2016 1391 9 685 962 0 18 0 chrUextra 13153088 13153201 -15851455 + (TTATA)n Simple_repeat Simple_repeat 2 116 0 9 685 2705 190 5 4 chrUextra 13153306 13154032 -15850624 - SAR_DM Satellite Satellite -716 726 1 9 685 6307 1 1 1 chrUextra 13154132 13154863 -15849793 + ROO_I LTR Pao 7466 8196 -60 9 685 6382 4 1 0 chrUextra 13154963 13155694 -15848962 + Invader2_I LTR Gypsy 2483 3214 -1378 9 685 2686 83 27 33 chrUextra 13155794 13156525 -15848131 + DMSAT6 Satellite Satellite 1 726 -29 9 685 1855 107 95 12 chrUextra 13156626 13157026 -15847630 - Gypsy12_I LTR Gypsy -894 4652 4161 9 685 2418 106 0 0 chrUextra 13157025 13157356 -15847300 - Gypsy12_I LTR Gypsy -1531 4015 3685 9 685 6300 0 1 0 chrUextra 13157456 13158145 -15846511 + SSU-rRNA_Dme rRNA rRNA 1306 1995 0 9 685 1474 201 16 4 chrUextra 13159118 13159848 -15844808 + SAR_DM Satellite Satellite 1 738 -749 9 685 259 159 73 73 chrUextra 13160063 13160131 -15844525 - Gypsy4_I LTR Gypsy -1897 4391 4324 9 685 642 294 85 40 chrUextra 13160154 13160271 -15844385 - Gypsy4_I LTR Gypsy -3195 2972 2767 9 685 1454 30 64 0 chrUextra 13160271 13160474 -15844182 - TLD2 Unknown Unknown -2 216 1 9 685 642 294 85 40 chrUextra 13160474 13160662 -15843994 - Gypsy4_I LTR Gypsy -3195 2766 2431 9 685 2934 199 23 11 chrUextra 13160780 13161510 -15843146 + SAR_DM Satellite Satellite 421 1159 -313 9 685 377 288 36 36 chrUextra 13161634 13161800 -15842856 + Gypsy3_I LTR Gypsy 1324 1546 -4631 9 685 393 234 9 18 chrUextra 13162222 13162331 -15842325 + Gypsy4_I LTR Gypsy 1654 1761 -4527 9 685 5355 38 4 3 chrUextra 13162442 13163173 -15841483 - R1_DM LINE R1 -1864 3492 2728 9 685 3245 190 17 24 chrUextra 13163277 13164004 -15840652 + SAR_DM Satellite Satellite 1 722 -203 9 685 4168 43 19 11 chrUextra 13164105 13164646 -15840010 - PROTOP_B DNA P -608 545 1 9 685 454 95 0 0 chrUextra 13164770 13164833 -15839823 + PROTOP_B DNA P 1 63 -1090 9 685 6443 1 1 3 chrUextra 13164935 13165666 -15838990 - LSU-rRNA_Dme rRNA rRNA -2646 1254 525 9 685 5833 27 23 1 chrUextra 13165766 13166497 -15838159 + PROTOP_B DNA P 32 775 -378 9 685 34 24 0 0 chrUextra 13166835 13166876 -15837780 + AT_rich Low_complexity Low_complexity 1 41 0 9 685 21 95 0 0 chrUextra 13167089 13167152 -15837504 + AT_rich Low_complexity Low_complexity 1 63 0 9 685 1467 6 0 0 chrUextra 13167164 13167325 -15837331 + LSU-rRNA_Dme rRNA rRNA 1 161 -3739 9 685 6104 1 0 0 chrUextra 13167428 13168078 -15836578 - SSU-rRNA_Dme rRNA rRNA -1345 650 1 9 685 6271 29 6 0 chrUextra 13168263 13168990 -15835666 - R1_DM LINE R1 -1966 3390 2660 9 685 6219 33 3 0 chrUextra 13169092 13169818 -15834838 - G2_DM LINE Jockey -718 2384 1657 9 685 2126 56 3 3 chrUextra 13169922 13170207 -15834449 - BATUMI_I LTR Pao -376 7587 7303 9 685 3364 19 28 12 chrUextra 13170230 13170652 -15834004 + BATUMI_I LTR Pao 6427 6855 -1108 9 685 6142 25 1 14 chrUextra 13170752 13171482 -15833174 + FW_DM LINE Jockey 857 1577 -3115 9 685 6186 19 6 12 chrUextra 13171583 13172314 -15832342 - BATUMI_I LTR Pao -5596 2367 1642 9 685 1425 29 0 0 chrUextra 13172414 13172624 -15832032 + (CTATT)n Simple_repeat Simple_repeat 1 210 0 9 685 1085 120 12 4 chrUextra 13172656 13173145 -15831511 + (CTATT)n Simple_repeat Simple_repeat 1 493 0 9 685 6415 18 3 1 chrUextra 13173245 13173976 -15830680 - R1_DM LINE R1 -952 4404 3673 9 685 6552 16 7 0 chrUextra 13174076 13174807 -15829849 - BS LINE Jockey -2055 3071 2336 9 685 2364 200 75 14 chrUextra 13174907 13175560 -15829096 + SAR_DM Satellite Satellite 577 1269 -203 9 685 1257 85 0 0 chrUextra 13175457 13175634 -15829022 - ARS406_DM Unknown Unknown -164 189 13 9 685 5553 38 11 24 chrUextra 13176569 13177272 -15827384 - CIRCE LINE Composite -3508 2848 2155 9 685 244 35 0 0 chrUextra 13177271 13177300 -15827356 - CIRCE LINE Composite -5071 1285 1257 9 685 24 0 0 0 chrUextra 13177475 13177499 -15827157 + AT_rich Low_complexity Low_complexity 1 24 0 9 685 278 182 43 43 chrUextra 13177572 13177687 -15826969 + T-rich Low_complexity Low_complexity 3 117 0 9 685 228 304 20 13 chrUextra 13177876 13178026 -15826630 + (TTTA)n Simple_repeat Simple_repeat 3 153 0 9 685 3289 180 6 19 chrUextra 13178231 13178951 -15825705 + SAR_DM Satellite Satellite 409 1118 -354 9 685 306 172 16 0 chrUextra 13178896 13178960 -15825696 - XDMR Unknown Unknown 0 361 297 9 685 4001 181 20 0 chrUextra 13179062 13179793 -15824863 - HETA LINE telomeric -4115 1966 1221 9 685 27 29 0 0 chrUextra 13180146 13180180 -15824476 + AT_rich Low_complexity Low_complexity 1 34 0 9 685 814 37 0 115 chrUextra 13180500 13180622 -15824034 + Baggins1 LINE LOA 5346 5453 0 9 685 2207 170 37 27 chrUextra 13180724 13181256 -15823400 - TART LINE telomeric -5053 9424 8953 9 685 27 62 0 0 chrUextra 13181398 13181446 -15823210 + AT_rich Low_complexity Low_complexity 1 48 0 9 685 6213 3 0 1 chrUextra 13181555 13182286 -15822370 + QUASIMODO_I LTR Gypsy 4868 5597 -463 9 685 6591 4 12 0 chrUextra 13182386 13183117 -15821539 - Gypsy4_I LTR Gypsy -508 5780 5041 9 685 2107 144 37 145 chrUextra 13183221 13183945 -15820711 + BATUMI_I LTR Pao 441 1086 -6877 9 685 22 0 0 0 chrUextra 13184733 13184755 -15819901 + AT_rich Low_complexity Low_complexity 1 22 0 9 685 28 48 0 0 chrUextra 13184981 13185023 -15819633 + AT_rich Low_complexity Low_complexity 1 42 0 9 685 2419 184 49 29 chrUextra 13185030 13185584 -15819072 + Stalker2_I LTR Gypsy 291 855 -6547 9 685 6219 25 1 11 chrUextra 13185710 13186441 -15818215 + FW_DM LINE Jockey 737 1460 -3232 9 685 740 34 0 0 chrUextra 13186541 13186630 -15818026 - ARS406_DM Unknown Unknown -175 178 90 9 685 2719 190 8 28 chrUextra 13186627 13187272 -15817384 + SAR_DM Satellite Satellite 487 1118 -354 9 685 6228 6 17 1 chrUextra 13187372 13188087 -15816569 - LSU-rRNA_Dme rRNA rRNA -2957 943 218 9 685 5607 49 1 29 chrUextra 13188203 13188933 -15815723 + R1_DM LINE R1 171 880 -4476 9 685 6701 0 1 0 chrUextra 13189034 13189765 -15814891 - ROO_I LTR Pao -5572 2684 1953 9 685 3213 189 18 14 chrUextra 13189865 13190596 -15814060 - SAR_DM Satellite Satellite -539 933 200 9 685 6731 3 0 0 chrUextra 13190696 13191427 -15813229 + DOC LINE Jockey 2085 2815 -1910 9 685 1355 0 23 17 chrUextra 13191527 13191704 -15812952 + NTS_DM Other Other 63 240 0 9 685 1972 4 17 13 chrUextra 13191704 13191943 -15812713 + NTS_DM Other Other 1 240 0 9 685 1388 6 0 18 chrUextra 13191943 13192108 -15812548 + NTS_DM Other Other 1 162 -78 9 685 303 73 0 0 chrUextra 13192217 13192258 -15812398 + NTS_DM Other Other 4 44 -196 9 685 6645 1 0 0 chrUextra 13192358 13193089 -15811567 - ROO_I LTR Pao -4994 3262 2532 9 685 3294 179 10 12 chrUextra 13193189 13193912 -15810744 - SAR_DM Satellite Satellite -557 915 195 9 685 6708 1 1 3 chrUextra 13194021 13194751 -15809905 - SSU-rRNA_Dme rRNA rRNA -486 1509 781 9 685 425 251 4 0 chrUextra 13195685 13195783 -15808873 - Gypsy_I LTR Gypsy -183 6324 6148 9 685 5109 4 0 0 chrUextra 13195853 13196413 -15808243 + QUASIMODO_LTR LTR Gypsy 1 560 -98 9 685 198 0 0 160 chrUextra 13196514 13196683 -15807973 + (CAAGA)n Simple_repeat Simple_repeat 2 143 0 9 685 235 222 65 65 chrUextra 13197549 13197626 -15807030 + DM1731_I LTR Copia 530 606 -3370 9 685 2133 286 25 18 chrUextra 13199006 13199726 -15804930 - FROGGER_I LTR Copia -334 1743 1019 9 685 647 46 11 33 chrUextra 13199837 13199927 -15804729 - NTS_DM Other Other -128 112 25 9 685 1302 18 0 12 chrUextra 13199979 13200145 -15804511 - NTS_DM Other Other -39 201 38 9 685 928 9 0 27 chrUextra 13200145 13200257 -15804399 - NTS_DM Other Other -107 133 25 9 685 1332 18 0 6 chrUextra 13200310 13200475 -15804181 - NTS_DM Other Other -39 201 38 9 685 820 11 0 0 chrUextra 13200475 13200568 -15804088 - NTS_DM Other Other -107 133 41 9 685 6515 16 0 0 chrUextra 13201499 13202230 -15802426 + R1_DM LINE R1 1542 2272 -3084 9 685 6311 14 0 0 chrUextra 13202330 13203061 -15801595 - Invader2_I LTR Gypsy -1214 3378 2648 9 685 1565 0 0 0 chrUextra 13203199 13203369 -15801287 - Copia2_LTR_DM LTR Copia 0 198 29 9 685 3291 10 90 0 chrUextra 13203369 13203757 -15800899 - Invader1_LTR LTR Gypsy 0 423 1 9 685 4157 20 134 3 chrUextra 13203992 13204657 -15799999 - Invader2_I LTR Gypsy -1968 2624 1873 9 685 429 0 20 0 chrUextra 13204674 13204723 -15799933 - Invader2_I LTR Gypsy -3442 1150 1101 9 685 3576 66 4 4 chrUextra 13204824 13205282 -15799374 - R1_DM LINE R1 -4898 458 1 9 685 2185 17 0 0 chrUextra 13205315 13205554 -15799102 - R1_DM LINE R1 0 5356 5118 9 685 2101 59 20 17 chrUextra 13206485 13206777 -15797879 - CIRCE LINE Composite -1083 5273 4981 9 685 748 24 0 0 chrUextra 13207131 13207216 -15797440 - CIRCE LINE Composite -1376 4980 4896 9 685 6368 23 1 3 chrUextra 13207316 13208047 -15796609 + MAX_I LTR Pao 1644 2373 -5541 9 685 3231 0 8 0 chrUextra 13208147 13208499 -15796157 + SSU-rRNA_Dme rRNA rRNA 1641 1995 0 9 685 58 15 0 0 chrUextra 13209129 13209194 -15795462 + AT_rich Low_complexity Low_complexity 1 65 0 9 685 22 35 0 0 chrUextra 13209369 13209398 -15795258 + AT_rich Low_complexity Low_complexity 1 29 0 9 685 6015 1 0 37 chrUextra 13209809 13210540 -15794116 - DM176_I LTR Gypsy -4896 1524 821 9 685 834 72 24 8 chrUextra 13210660 13210786 -15793870 + STALKER4_I LTR Gypsy 758 885 -5645 9 685 687 172 92 75 chrUextra 13211132 13211371 -15793285 + STALKER4_I LTR Gypsy 885 1127 -5403 9 685 6689 3 1 0 chrUextra 13211471 13212202 -15792454 - DMRT1B LINE R1 -557 4626 3895 9 685 2739 142 16 0 chrUextra 13212305 13212736 -15791920 + IDEFIX_I LTR Gypsy 3826 4263 -1365 9 685 1591 161 0 34 chrUextra 13212735 13213031 -15791625 + IDEFIX_I LTR Gypsy 4504 4789 -839 9 685 6620 4 3 0 chrUextra 13213964 13214695 -15789961 + DOC LINE Jockey 1086 1818 -2907 9 685 1670 21 0 0 chrUextra 13214795 13214982 -15789674 - R1_DM LINE R1 -611 4745 4559 9 685 4777 16 2 2 chrUextra 13214980 13215526 -15789130 - R1_DM LINE R1 -1270 4086 3541 9 685 6802 4 0 0 chrUextra 13215626 13216357 -15788299 + R2_DM LINE R2 2015 2745 -862 9 685 1505 6 0 6 chrUextra 13217288 13217463 -15787193 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 9 685 6434 22 7 0 chrUextra 13218119 13218850 -15785806 + DMRT1A LINE R1 2639 3374 -1809 9 685 2618 180 18 11 chrUextra 13218950 13220510 -15784146 - DMSAT6 Satellite Satellite -23 1571 1 9 685 3531 231 1 1 chrUextra 13220612 13221340 -15783316 - Gypsy6_I LTR Gypsy -2322 4690 3963 9 685 1120 28 0 7 chrUextra 13221443 13221586 -15783070 - NTS_DM Other Other -61 179 38 9 685 870 0 0 0 chrUextra 13221586 13221682 -15782974 - NTS_DM Other Other -107 133 38 9 685 871 19 9 27 chrUextra 13221682 13221793 -15782863 - NTS_DM Other Other -107 133 25 9 685 21 57 0 0 chrUextra 13221819 13221854 -15782802 + AT_rich Low_complexity Low_complexity 1 35 0 9 685 1332 18 0 6 chrUextra 13221854 13222019 -15782637 - NTS_DM Other Other -39 201 38 9 685 928 9 0 27 chrUextra 13222019 13222131 -15782525 - NTS_DM Other Other -107 133 25 9 685 5071 4 4 0 chrUextra 13222274 13222828 -15781828 - R1_DM LINE R1 -4800 556 1 9 685 1466 6 6 6 chrUextra 13222828 13223005 -15781651 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2456 9 685 279 73 29 106 chrUextra 13223156 13223225 -15781431 + DMTOM1_LTR LTR Gypsy 308 403 -7 9 685 618 204 109 116 chrUextra 13223225 13223830 -15780826 + ROVER-I_DM LTR Gypsy 1 601 -5983 9 685 592 0 0 14 chrUextra 13223936 13224008 -15780648 - R1_DM LINE R1 -486 4870 4800 9 685 659 26 0 0 chrUextra 13224001 13224079 -15780577 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2578 9 685 5077 2 0 2 chrUextra 13224083 13224667 -15779989 - R2_DM LINE R2 0 3607 3025 9 685 6133 15 0 3 chrUextra 13224767 13225498 -15779158 - Invader1_I LTR Gypsy -2179 1007 279 9 685 6332 4 0 0 chrUextra 13225598 13226329 -15778327 + DOC LINE Jockey 3691 4421 -304 9 685 5884 0 3 0 chrUextra 13226429 13227160 -15777496 + DM412 LTR Gypsy 1186 1918 -4979 9 685 1769 171 8 10 chrUextra 13227480 13227875 -15776781 + SAR_DM Satellite Satellite 594 987 -485 9 685 34 24 0 0 chrUextra 13228779 13228820 -15775836 + AT_rich Low_complexity Low_complexity 1 41 0 9 685 657 0 0 0 chrUextra 13228922 13228997 -15775659 - GTWIN_I LTR Gypsy -6346 75 1 9 685 4346 0 0 0 chrUextra 13228997 13229492 -15775164 - GTWIN_LTR LTR Gypsy 0 495 1 9 685 1420 0 0 0 chrUextra 13229492 13229653 -15775003 - GTWIN_I LTR Gypsy 0 6421 6261 9 685 4204 75 67 11 chrUextra 13229773 13230484 -15774172 + Gypsy12_I LTR Gypsy 4531 5281 -265 9 685 3057 165 26 13 chrUextra 13230594 13231293 -15773363 + SAR_DM Satellite Satellite 369 1076 -396 9 685 6265 7 0 0 chrUextra 13231415 13232146 -15772510 + R1_DM LINE R1 4442 5172 -184 9 685 2109 185 18 10 chrUextra 13232270 13232783 -15771873 - SAR_DM Satellite Satellite -396 1076 560 9 685 315 216 29 10 chrUextra 13232697 13232800 -15771856 + ARS406_DM Unknown Unknown 1 105 -248 9 685 639 185 0 7 chrUextra 13232830 13232977 -15771679 - SAR_DM Satellite Satellite -774 698 553 9 685 3266 28 2 0 chrUextra 13233077 13233476 -15771180 - R1_DM LINE R1 -550 4806 4407 9 685 2584 13 0 0 chrUextra 13233496 13233808 -15770848 - R1_DM LINE R1 -1074 4282 3971 9 685 6039 16 26 0 chrUextra 13233908 13234639 -15770017 - Gypsy4_I LTR Gypsy -2031 4257 3508 9 685 6086 7 6 0 chrUextra 13234743 13235470 -15769186 + Gypsy4_I LTR Gypsy 4265 4995 -1293 9 685 400 341 39 36 chrUextra 13235578 13236019 -15768637 - Copia2_I LTR Copia -1269 2893 2452 9 685 279 0 0 0 chrUextra 13236401 13236434 -15768222 - LSU-rRNA_Dme rRNA rRNA -2080 1820 1788 9 685 5397 5 5 6 chrUextra 13236478 13237132 -15767524 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1136 9 685 6292 4 0 0 chrUextra 13237232 13237963 -15766693 - R1_DM LINE R1 -2491 2865 2135 9 85 6122 8 0 0 chrUextra 13238063 13238794 -15765862 + MDG1_I LTR Gypsy 3132 3862 -2734 9 686 281 0 0 0 chrUextra 13238894 13238930 -15765726 - Copia2_I LTR Copia -2894 1268 1233 9 686 5950 6 9 0 chrUextra 13238925 13239625 -15765031 - Copia2_I LTR Copia -3039 1123 418 9 686 414 0 0 0 chrUextra 13239725 13239773 -15764883 + PROTOP_B DNA P 1106 1153 0 9 686 4505 9 8 0 chrUextra 13239923 13240456 -15764200 + Copia2_I LTR Copia 3526 4062 -100 9 686 6106 7 4 0 chrUextra 13240556 13241287 -15763369 - ROO_I LTR Pao -3758 4498 3765 9 686 3355 171 6 7 chrUextra 13241388 13242111 -15762545 - SAR_DM Satellite Satellite -425 1047 326 9 686 5841 11 0 11 chrUextra 13242218 13242949 -15761707 + Gypsy4_I LTR Gypsy 15 737 -5551 9 686 6206 14 1 0 chrUextra 13243049 13243780 -15760876 + DM1731_I LTR Copia 811 1542 -2434 9 686 6382 1 0 0 chrUextra 13243880 13244611 -15760045 + DOC LINE Jockey 3557 4287 -438 9 686 3202 163 18 17 chrUextra 13244716 13245441 -15759215 - SAR_DM Satellite Satellite -371 1101 376 9 686 5747 4 4 6 chrUextra 13246371 13247061 -15757595 + LSU-rRNA_Dme rRNA rRNA 1100 1788 -2112 9 686 1712 171 0 12 chrUextra 13247201 13247544 -15757112 - STALKER4_I LTR Gypsy -5957 573 235 9 686 31 58 0 0 chrUextra 13247545 13247597 -15757059 + AT_rich Low_complexity Low_complexity 1 52 0 9 686 1524 87 3 32 chrUextra 13247685 13247931 -15756725 - STALKER4_LTR LTR Gypsy -3 399 165 9 686 2065 26 4 25 chrUextra 13248377 13248655 -15756001 + BATUMI_LTR LTR Pao 1 272 0 9 686 916 9 0 0 chrUextra 13248655 13248761 -15755895 + BATUMI_I LTR Pao 1 106 -7857 9 686 685 83 74 0 chrUextra 13248861 13248969 -15755687 + R1_DM LINE R1 5172 5287 -69 9 686 5017 25 0 0 chrUextra 13248991 13249591 -15755065 + R2_DM LINE R2 1932 2531 -1076 9 686 262 106 0 21 chrUextra 13250528 13250576 -15754080 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 686 3089 172 15 18 chrUextra 13251362 13252078 -15752578 - SAR_DM Satellite Satellite -535 937 224 9 686 6112 3 0 0 chrUextra 13252186 13252911 -15751745 + LSU-rRNA_Dme rRNA rRNA 218 942 -2958 9 686 6131 4 1 0 chrUextra 13253011 13253741 -15750915 - MDG1_I LTR Gypsy -1492 5104 4374 9 686 1560 174 6 6 chrUextra 13254671 13255006 -15749650 + SAR_DM Satellite Satellite 416 750 -722 9 686 3098 16 0 13 chrUextra 13255014 13255401 -15749255 - DOC2_DM LINE Jockey 0 4793 4412 9 686 5724 15 0 0 chrUextra 13255555 13256231 -15748425 + Gypsy4_I LTR Gypsy 374 1049 -5239 9 686 2115 174 8 11 chrUextra 13256333 13256835 -15747821 + SAR_DM Satellite Satellite 1 674 -493 9 686 1251 85 0 0 chrUextra 13256835 13257024 -15747632 - ARS406_DM Unknown Unknown -164 189 1 9 686 2115 174 8 11 chrUextra 13257024 13257059 -15747597 + SAR_DM Satellite Satellite 675 723 -444 9 686 2304 53 0 0 chrUextra 13257161 13257462 -15747194 + R1_DM LINE R1 1493 1793 -3563 9 686 1939 161 25 40 chrUextra 13257463 13257865 -15746791 + R1_DM LINE R1 310 705 -4651 9 686 6142 10 6 0 chrUextra 13257991 13258721 -15745935 + DMRT1A LINE R1 1270 2003 -3180 9 686 5456 36 8 22 chrUextra 13258821 13259551 -15745105 - CIRCE LINE Composite -3465 2891 2172 9 686 2102 175 23 55 chrUextra 13259651 13260381 -15744275 - SAR_DM Satellite Satellite -675 706 1 9 686 2686 51 14 0 chrUextra 13260481 13260851 -15743805 - PROTOP_A DNA P -657 448 74 9 686 1793 176 7 7 chrUextra 13261311 13262037 -15742619 - SAR_DM Satellite Satellite -664 726 1 9 686 1414 129 109 97 chrUextra 13262145 13262558 -15742098 + HMSBEAGLE_I LTR Gypsy 161 578 -5951 9 686 1460 118 55 0 chrUextra 13262630 13262868 -15741788 - Invader1_LTR LTR Gypsy 0 423 173 9 686 6299 3 0 0 chrUextra 13262971 13263701 -15740955 - DOC LINE Jockey -1785 2940 2211 9 686 546 125 192 0 chrUextra 13263871 13263971 -15740685 + HOBO DNA hAT 193 312 -2704 9 686 1897 101 191 17 chrUextra 13263971 13264378 -15740278 + PROTOP_B DNA P 1 478 -675 9 686 1224 74 6 0 chrUextra 13264355 13264531 -15740125 + HOBO DNA hAT 330 506 -2510 9 686 2895 184 18 26 chrUextra 13264635 13265361 -15739295 + SAR_DM Satellite Satellite 1 720 -208 9 686 364 98 0 0 chrUextra 13265461 13265512 -15739144 - HETRP_DM Satellite Satellite -293 1579 1529 9 686 668 179 7 14 chrUextra 13265679 13265821 -15738835 - HETRP_DM Satellite Satellite -203 1669 1529 9 686 640 193 7 14 chrUextra 13265961 13266103 -15738553 - HETRP_DM Satellite Satellite -203 1669 1529 9 686 5973 7 0 0 chrUextra 13266291 13266982 -15737674 - Invader4_I LTR Gypsy -1722 691 1 9 686 342 0 0 0 chrUextra 13266982 13267021 -15737635 - Invader4_LTR LTR Gypsy 0 346 308 9 686 1620 0 0 0 chrUextra 13267121 13267480 -15737176 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 9 686 1082 34 96 0 chrUextra 13267705 13267851 -15736805 - DNAREP1_DM LINE Penelope -9 585 426 9 686 1392 18 0 0 chrUextra 13267951 13268118 -15736538 + CIRCE LINE Composite 1707 1873 -4483 9 686 4279 21 4 9 chrUextra 13268148 13268681 -15735975 + CIRCE LINE Composite 2015 2544 -3812 9 686 5920 37 1 0 chrUextra 13269611 13270341 -15734315 + DMCR1A LINE CR1 863 1593 -2877 9 686 6161 1 0 0 chrUextra 13270441 13271171 -15733485 + QUASIMODO_I LTR Gypsy 1202 1931 -4129 9 686 6255 4 0 0 chrUextra 13271271 13272001 -15732655 + DMRT1B LINE R1 1197 1926 -3257 9 686 1316 74 0 16 chrUextra 13272931 13273421 -15731235 + (CTTAT)n Simple_repeat Simple_repeat 1 481 0 9 686 1201 37 0 31 chrUextra 13273436 13273661 -15730995 + (CTTAT)n Simple_repeat Simple_repeat 1 218 0 9 686 599 13 66 0 chrUextra 13273761 13273837 -15730819 - Baggins1 LINE LOA -1891 3562 3482 9 686 379 200 11 0 chrUextra 13273824 13273914 -15730742 - DNAREP1_DM LINE Penelope -480 114 24 9 686 596 120 31 0 chrUextra 13274293 13274409 -15730247 - Gypsy12A_LTR LTR Gypsy -1 2335 2130 9 686 243 184 0 20 chrUextra 13274441 13274491 -15730165 - Gypsy12A_LTR LTR Gypsy -249 2031 1983 9 686 4947 5 0 0 chrUextra 13274591 13275171 -15729485 + DMRT1B LINE R1 4464 5043 -140 9 686 1119 73 0 0 chrUextra 13275171 13275321 -15729335 + (TTGTG)n Simple_repeat Simple_repeat 4 153 0 9 686 2661 23 6 9 chrUextra 13275421 13275766 -15728890 - CIRCE LINE Composite -1032 5324 4981 9 686 241 32 0 0 chrUextra 13276116 13276147 -15728509 - CIRCE LINE Composite -1376 4980 4950 9 686 5807 4 0 16 chrUextra 13276251 13276981 -15727675 - R1_DM LINE R1 -1641 3715 2998 9 686 1157 15 0 0 chrUextra 13277256 13277391 -15727265 + 5S_DM RNA RNA 1 135 0 9 686 1150 7 0 0 chrUextra 13277625 13277760 -15726896 + 5S_DM RNA RNA 1 135 0 9 686 2781 182 16 20 chrUextra 13277911 13278641 -15726015 - SAR_DM Satellite Satellite -626 727 1 9 686 6161 0 1 8 chrUextra 13278741 13279471 -15725185 - SSU-rRNA_Dme rRNA rRNA -288 1707 983 9 686 298 28 0 0 chrUextra 13279574 13279610 -15725046 - NTS_DM Other Other -204 36 1 9 686 1734 21 17 17 chrUextra 13279610 13279850 -15724806 - NTS_DM Other Other 0 240 1 9 686 1756 17 17 17 chrUextra 13279850 13280090 -15724566 - NTS_DM Other Other 0 240 1 9 686 1498 19 19 19 chrUextra 13280090 13280301 -15724355 - NTS_DM Other Other 0 240 30 9 686 330 283 84 38 chrUextra 13280403 13280642 -15724014 + MICROPIA_I LTR Gypsy 3534 3783 -693 9 686 314 294 121 12 chrUextra 13280739 13280904 -15723752 + MICROPIA_I LTR Gypsy 3668 3850 -626 9 686 342 171 29 0 chrUextra 13281061 13281131 -15723525 - PROTOP_B DNA P -200 953 882 9 686 1237 0 0 0 chrUextra 13281231 13281376 -15723280 + R1_DM LINE R1 4922 5066 -290 9 686 954 26 0 0 chrUextra 13281373 13281487 -15723169 + R1_DM LINE R1 5243 5356 0 9 686 3107 75 9 5 chrUextra 13281520 13281961 -15722695 + R1_DM LINE R1 1 443 -4913 9 686 3253 180 7 8 chrUextra 13282061 13282791 -15721865 + SAR_DM Satellite Satellite 295 1023 -449 9 686 1349 0 0 0 chrUextra 13283208 13283367 -15721289 - FW_DM LINE Jockey -4515 177 19 9 686 3259 151 22 23 chrUextra 13283723 13284451 -15720205 + SAR_DM Satellite Satellite 293 1019 -453 9 686 3143 180 7 6 chrUextra 13284559 13285268 -15719388 - SAR_DM Satellite Satellite -539 933 224 9 686 442 99 0 0 chrUextra 13285206 13285277 -15719379 + ARS406_DM Unknown Unknown 1 71 -282 9 686 2800 189 12 16 chrUextra 13285382 13286111 -15718545 + SAR_DM Satellite Satellite 1 725 -291 9 686 6403 0 0 0 chrUextra 13286211 13286941 -15717715 - Gypsy6_I LTR Gypsy -169 6843 6114 9 686 1594 61 0 101 chrUextra 13287041 13287298 -15717358 - CIRCE LINE Composite -5153 1203 973 9 686 2594 9 97 0 chrUextra 13287440 13287771 -15716885 - CIRCE LINE Composite -5386 970 608 9 686 3828 33 2 0 chrUextra 13287874 13288355 -15716301 - R1_DM LINE R1 -4154 1202 721 9 686 1294 62 0 17 chrUextra 13288366 13288547 -15716109 - R1_DM LINE R1 -4955 401 224 9 686 563 42 0 0 chrUextra 13288530 13288601 -15716055 - R1_DM LINE R1 -118 5238 5168 9 686 4118 8 62 2 chrUextra 13288701 13289230 -15715426 + MDG3_I LTR Gypsy 4426 4986 0 9 686 1397 16 5 70 chrUextra 13289230 13289431 -15715225 + MDG3_LTR LTR Gypsy 1 188 -79 9 686 2483 204 33 14 chrUextra 13289531 13290261 -15714395 + SAR_DM Satellite Satellite 459 1202 -270 9 686 201 121 0 0 chrUextra 13290702 13290735 -15713921 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 686 644 186 7 14 chrUextra 13291213 13291355 -15713301 + HETRP_DM Satellite Satellite 1529 1669 -203 9 686 668 179 7 14 chrUextra 13291522 13291664 -15712992 + HETRP_DM Satellite Satellite 1529 1669 -203 9 686 473 169 0 11 chrUextra 13291827 13291917 -15712739 + HETRP_DM Satellite Satellite 1529 1617 -255 9 686 4403 2 0 0 chrUextra 13292021 13292530 -15712126 - R1_DM LINE R1 -1991 3365 2857 9 686 1957 0 0 4 chrUextra 13292525 13292751 -15711905 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2430 9 686 1319 12 0 0 chrUextra 13292851 13293022 -15711634 + STALKER4_I LTR Gypsy 6360 6530 0 9 686 3040 58 11 14 chrUextra 13293022 13293457 -15711199 + STALKER4_LTR LTR Gypsy 1 399 -3 9 686 734 146 0 0 chrUextra 13293458 13293581 -15711075 - Invader1_I LTR Gypsy -681 2505 2383 9 686 5446 24 41 15 chrUextra 13293681 13294411 -15710245 - ROO_I LTR Pao -4068 4188 3440 9 686 832 20 0 0 chrUextra 13294511 13294613 -15710043 + NTS_DM Other Other 32 133 -107 9 686 1252 18 0 6 chrUextra 13294613 13294778 -15709878 + NTS_DM Other Other 38 201 -39 9 686 21 57 0 0 chrUextra 13294778 13294813 -15709843 + AT_rich Low_complexity Low_complexity 1 35 0 9 686 832 9 9 27 chrUextra 13294839 13294950 -15709706 + NTS_DM Other Other 25 133 -107 9 686 817 0 0 0 chrUextra 13294950 13295046 -15709610 + NTS_DM Other Other 38 133 -107 9 686 1337 21 20 20 chrUextra 13295046 13295241 -15709415 + NTS_DM Other Other 38 232 -8 9 686 6285 1 0 1 chrUextra 13295341 13296071 -15708585 - R1_DM LINE R1 -3340 2016 1288 9 686 3985 72 23 14 chrUextra 13296171 13296747 -15707909 + R1_DM LINE R1 1663 2243 -3113 9 686 6238 1 1 1 chrUextra 13297001 13297731 -15706925 + R1_DM LINE R1 1099 1828 -3528 9 686 3005 190 11 20 chrUextra 13298661 13299391 -15705265 + SAR_DM Satellite Satellite 1 723 -216 9 686 6179 0 1 0 chrUextra 13299491 13300221 -15704435 - TABOR_I LTR Gypsy -5307 1029 299 9 686 5766 29 0 7 chrUextra 13300321 13301051 -15703605 + R1_DM LINE R1 2223 2947 -2409 9 686 3105 183 11 11 chrUextra 13301152 13301881 -15702775 + SAR_DM Satellite Satellite 195 923 -549 9 686 5913 12 1 3 chrUextra 13301981 13302711 -15701945 - STALKER4_I LTR Gypsy -1119 5411 4683 9 686 6123 7 33 0 chrUextra 13302811 13303541 -15701115 - Invader3_I LTR Gypsy -2953 1935 1182 9 686 1171 164 136 32 chrUextra 13303644 13303953 -15700703 - TART LINE telomeric -5085 9392 9052 9 686 3516 7 0 0 chrUextra 13303955 13304371 -15700285 - G2_DM LINE Jockey 0 3102 2687 9 686 327 0 24 0 chrUextra 13304471 13304512 -15700144 - LSU-rRNA_Dme rRNA rRNA -2071 1829 1788 9 686 5380 3 5 5 chrUextra 13304556 13305201 -15699455 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1144 9 686 2045 0 0 4 chrUextra 13305301 13305537 -15699119 + SSU-rRNA_Dme rRNA rRNA 1761 1995 0 9 686 21 89 0 0 chrUextra 13305556 13305612 -15699044 + AT_rich Low_complexity Low_complexity 1 56 0 9 686 2810 194 26 8 chrUextra 13306133 13306860 -15697796 - SAR_DM Satellite Satellite -495 977 238 9 686 1007 265 108 87 chrUextra 13306962 13307676 -15696980 - Gypsy12_LTR LTR Gypsy -1371 965 237 9 686 897 173 102 15 chrUextra 13308125 13308330 -15696326 + DMLTR5 LTR Gypsy 44 266 0 9 686 351 85 661 14 chrUextra 13308329 13308461 -15696195 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 9 686 1909 184 7 11 chrUextra 13308621 13309067 -15695589 + SAR_DM Satellite Satellite 460 903 -569 9 686 1040 213 4 4 chrUextra 13309082 13309351 -15695305 + SAR_DM Satellite Satellite 496 764 -708 9 686 1227 18 6 23 chrUextra 13310281 13310454 -15694202 - NTS_DM Other Other -46 194 25 9 686 255 125 0 0 chrUextra 13310520 13310560 -15694096 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 246 150 0 0 chrUextra 13310603 13310643 -15694013 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 246 150 0 0 chrUextra 13310695 13310735 -15693921 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 246 150 0 0 chrUextra 13310787 13310827 -15693829 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 27 29 0 0 chrUextra 13310832 13310866 -15693790 + AT_rich Low_complexity Low_complexity 1 34 0 9 686 639 0 0 0 chrUextra 13310938 13311011 -15693645 - LSU-rRNA_Dme rRNA rRNA 0 3900 3828 9 686 5494 2 2 0 chrUextra 13311943 13312571 -15692085 - SSU-rRNA_Dme rRNA rRNA -1366 629 1 9 686 263 53 0 0 chrUextra 13312771 13312809 -15691847 - ACCORD2_I LTR Gypsy -53 7159 7122 9 686 1034 24 254 32 chrUextra 13312805 13313022 -15691634 - ACCORD2_I LTR Gypsy -5441 1771 1507 9 686 2142 25 14 11 chrUextra 13313103 13313389 -15691267 - ACCORD2_I LTR Gypsy -5845 1367 1081 9 686 953 9 0 0 chrUextra 13313389 13313501 -15691155 + MICROPIA_LTR LTR Gypsy 1 112 -364 9 686 1008 58 0 28 chrUextra 13313601 13313743 -15690913 - STALKER4_I LTR Gypsy -5955 575 438 9 686 4912 12 24 0 chrUextra 13313741 13314331 -15690325 + SSU-rRNA_Dme rRNA rRNA 453 1056 -939 9 686 2267 100 12 32 chrUextra 13314431 13315157 -15689499 - DMSAT6 Satellite Satellite -94 711 1 9 686 837 106 8 92 chrUextra 13315511 13315761 -15688895 + BATUMI_I LTR Pao 504 732 -7231 9 686 1270 50 35 39 chrUextra 13315761 13315990 -15688666 + BATUMI_I LTR Pao 603 830 -7133 9 686 2064 227 97 37 chrUextra 13316112 13316821 -15687835 + ROVER-I_DM LTR Gypsy 1659 2410 -4174 9 686 3172 175 10 10 chrUextra 13316925 13317651 -15687005 - SAR_DM Satellite Satellite -535 937 212 9 686 1597 0 0 0 chrUextra 13317751 13317932 -15686724 + SSU-rRNA_Dme rRNA rRNA 1815 1995 0 9 686 21 89 0 0 chrUextra 13317951 13318007 -15686649 + AT_rich Low_complexity Low_complexity 1 56 0 9 686 2536 185 5 9 chrUextra 13318608 13319191 -15685465 - SAR_DM Satellite Satellite -396 1076 496 9 686 796 30 0 0 chrUextra 13319196 13319296 -15685360 + ARS406_DM Unknown Unknown 90 189 -164 9 686 514 146 0 19 chrUextra 13319206 13319311 -15685345 - SAR_DM Satellite Satellite -569 903 801 9 686 2302 108 20 30 chrUextra 13319430 13320141 -15684515 + DMSAT6 Satellite Satellite 1 703 0 9 686 1447 83 3 26 chrUextra 13320241 13320476 -15684180 + STALKER4_LTR LTR Gypsy 205 399 -3 9 686 33 56 0 0 chrUextra 13320562 13320616 -15684040 + AT_rich Low_complexity Low_complexity 1 54 0 9 686 1617 179 14 12 chrUextra 13320617 13320961 -15683695 + STALKER4_I LTR Gypsy 235 579 -5951 9 686 364 66 31 47 chrUextra 13321071 13321135 -15683521 - DMRT1A LINE R1 -286 4897 4835 9 686 5229 24 14 1 chrUextra 13321116 13321778 -15682878 + Transib5 DNA Transib 997 1666 -1335 9 686 625 80 0 0 chrUextra 13321901 13321989 -15682667 - Baggins1 LINE LOA -575 4878 4791 9 686 1469 16 0 69 chrUextra 13322429 13322631 -15682025 - Baggins1 LINE LOA 0 5453 5266 9 686 1411 196 135 23 chrUextra 13322752 13323232 -15681424 - Gypsy12_LTR LTR Gypsy -753 1583 1050 9 686 630 251 0 11 chrUextra 13323261 13323450 -15681206 - Gypsy12_LTR LTR Gypsy -1564 772 586 9 686 1620 6 0 0 chrUextra 13323561 13323915 -15680741 + (GAGAA)n Simple_repeat Simple_repeat 1 354 0 9 686 1194 0 0 7 chrUextra 13324391 13324532 -15680124 + LSU-rRNA_Dme rRNA rRNA 2420 2559 -1341 9 686 4955 8 2 2 chrUextra 13324534 13325121 -15679535 + R2_DM LINE R2 2554 3140 -467 9 686 6356 7 0 0 chrUextra 13325221 13325951 -15678705 - MICROPIA_I LTR Gypsy -1967 2509 1780 9 686 1569 131 194 14 chrUextra 13326051 13326422 -15678234 - DNAREP1_DM LINE Penelope -156 438 1 9 686 307 196 78 10 chrUextra 13326425 13326528 -15678128 + XDMR_DM Unknown Unknown 176 285 -75 9 686 1620 0 0 0 chrUextra 13326575 13326781 -15677875 + (TTCTC)n Simple_repeat Simple_repeat 1 206 0 9 686 5241 59 20 3 chrUextra 13326881 13327611 -15677045 - R1_DM LINE R1 -4474 882 140 9 686 5971 18 0 0 chrUextra 13327711 13328441 -15676215 + FW_DM LINE Jockey 2566 3295 -1397 9 686 4630 100 6 4 chrUextra 13328541 13329271 -15675385 + S_DM DNA Tc1 62 792 -944 9 686 2354 100 49 25 chrUextra 13329371 13330101 -15674555 - DMSAT6 Satellite Satellite 0 748 1 9 686 1041 8 0 0 chrUextra 13330201 13330330 -15674326 - STALKER4_LTR LTR Gypsy -273 129 1 9 686 4945 21 2 0 chrUextra 13330330 13330931 -15673725 + FW_DM LINE Jockey 3240 3841 -851 9 686 2575 202 45 8 chrUextra 13331031 13331761 -15672895 - SAR_DM Satellite Satellite -308 1164 408 9 686 6291 6 0 0 chrUextra 13331868 13332591 -15672065 - R2_DM LINE R2 -82 3525 2803 9 686 298 329 12 12 chrUextra 13332710 13332879 -15671777 - BLASTOPIA_I LTR Gypsy -772 3709 3541 9 686 2523 181 50 18 chrUextra 13333521 13334251 -15670405 - SAR_DM Satellite Satellite -558 753 1 9 686 780 175 0 0 chrUextra 13334360 13334520 -15670136 - SAR_DM Satellite Satellite -774 698 539 9 686 3097 230 20 24 chrUextra 13334531 13335911 -15668745 - SAR_DM Satellite Satellite -683 1375 1 9 686 6135 3 1 0 chrUextra 13336011 13336741 -15667915 + MDG3_I LTR Gypsy 3395 4125 -861 9 686 3015 185 8 16 chrUextra 13336844 13337571 -15667085 - SAR_DM Satellite Satellite -361 1111 391 9 686 1530 0 6 0 chrUextra 13337671 13337848 -15666808 + LSU-rRNA_Dme rRNA rRNA 3723 3900 0 9 686 29 28 0 0 chrUextra 13337920 13337956 -15666700 + AT_rich Low_complexity Low_complexity 1 36 0 9 686 246 150 0 0 chrUextra 13337961 13338001 -15666655 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 246 150 0 0 chrUextra 13338053 13338093 -15666563 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 246 150 0 0 chrUextra 13338145 13338185 -15666471 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 246 150 0 0 chrUextra 13338237 13338277 -15666379 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 255 125 0 0 chrUextra 13338320 13338360 -15666296 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 5960 28 0 4 chrUextra 13338501 13339231 -15665425 - DMCR1A LINE CR1 -2977 1493 767 9 686 246 150 0 0 chrUextra 13339352 13339392 -15665264 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 230 150 0 0 chrUextra 13339435 13339475 -15665181 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 22 56 0 0 chrUextra 13339488 13339524 -15665132 + AT_rich Low_complexity Low_complexity 1 36 0 9 686 870 9 0 27 chrUextra 13339550 13339662 -15664994 + NTS_DM Other Other 25 133 -107 9 686 1252 18 0 6 chrUextra 13339662 13339827 -15664829 + NTS_DM Other Other 38 201 -39 9 686 870 9 0 27 chrUextra 13339879 13339991 -15664665 + NTS_DM Other Other 25 133 -107 9 686 607 0 0 0 chrUextra 13339991 13340061 -15664595 + NTS_DM Other Other 38 107 -133 9 686 5881 30 0 4 chrUextra 13340161 13340891 -15663765 - R1_DM LINE R1 -3292 2064 1338 9 686 1945 24 71 4 chrUextra 13340991 13341245 -15663411 - PROTOP DNA P -4209 271 1 9 686 6309 4 0 0 chrUextra 13341821 13342551 -15662105 + R1_DM LINE R1 1918 2647 -2709 9 686 5679 16 3 4 chrUextra 13342651 13343381 -15661275 - IDEFIX_I LTR Gypsy -1700 3928 3200 9 686 1508 0 0 11 chrUextra 13343481 13343663 -15660993 + BATUMI_I LTR Pao 7784 7963 0 9 686 2001 35 3 34 chrUextra 13343663 13343954 -15660702 + BATUMI_I LTR Pao 7002 7283 -680 9 686 1205 24 12 12 chrUextra 13343954 13344121 -15660535 + (TTATA)n Simple_repeat Simple_repeat 5 171 0 9 686 638 26 0 0 chrUextra 13344125 13344203 -15660453 - ROVER-LTR_DM LTR Gypsy 0 367 290 9 686 267 0 0 0 chrUextra 13344311 13344343 -15660313 - DOC3_DM LINE Jockey -1704 3036 3005 9 686 2588 36 9 3 chrUextra 13344342 13344673 -15659983 - DOC3_DM LINE Jockey -1886 2854 2522 9 686 2992 34 16 0 chrUextra 13344661 13345041 -15659615 - DOC3_DM LINE Jockey -2439 2301 1916 9 686 3256 162 15 16 chrUextra 13345142 13345871 -15658785 + SAR_DM Satellite Satellite 293 1020 -452 9 686 21 89 0 0 chrUextra 13346077 13346133 -15658523 + AT_rich Low_complexity Low_complexity 1 56 0 9 686 29 47 0 0 chrUextra 13346171 13346214 -15658442 + AT_rich Low_complexity Low_complexity 1 43 0 9 686 27 81 0 0 chrUextra 13346260 13346322 -15658334 + AT_rich Low_complexity Low_complexity 1 62 0 9 686 236 0 0 0 chrUextra 13346671 13346701 -15657955 - PROTOP_B DNA P 0 1153 1124 9 686 5419 34 60 1 chrUextra 13346801 13347529 -15657127 + R1_DM LINE R1 460 1230 -4126 9 686 553 171 0 23 chrUextra 13347631 13347763 -15656893 - ARS406_DM Unknown Unknown -224 129 1 9 686 2848 178 27 13 chrUextra 13347665 13348360 -15656296 + SAR_DM Satellite Satellite 191 895 -577 9 686 2004 0 0 0 chrUextra 13348461 13348691 -15655965 - DMRT1B LINE R1 -4953 230 1 9 686 1510 107 11 0 chrUextra 13348920 13349191 -15655465 - TART_B1 LINE telomeric -8410 2244 1971 9 686 6218 3 1 1 chrUextra 13349291 13350021 -15654635 - LSU-rRNA_Dme rRNA rRNA -2565 1335 606 9 686 1167 7 0 0 chrUextra 13350361 13350496 -15654160 - 5S_DM RNA RNA 0 135 1 9 686 1080 0 0 0 chrUextra 13350727 13350851 -15653805 - 5S_DM RNA RNA 0 135 12 9 686 3028 0 3 0 chrUextra 13351335 13351681 -15652975 - SSU-rRNA_Dme rRNA rRNA 0 1995 1649 9 686 2951 195 8 8 chrUextra 13351781 13352505 -15652151 - SAR_DM Satellite Satellite -554 918 195 9 686 5894 21 11 7 chrUextra 13352611 13353341 -15651315 + FW_DM LINE Jockey 1987 2719 -1973 9 686 6227 7 0 0 chrUextra 13353441 13354171 -15650485 - R1_DM LINE R1 -2505 2851 2122 9 686 6227 1 0 0 chrUextra 13354271 13355001 -15649655 + BLOOD_I LTR Gypsy 2450 3179 -3434 9 686 6148 0 0 0 chrUextra 13355101 13355831 -15648825 - BLOOD_I LTR Gypsy -330 6283 5554 9 686 2221 105 41 27 chrUextra 13355949 13356661 -15647995 + DMSAT6 Satellite Satellite 1 721 0 9 686 5920 19 6 3 chrUextra 13356761 13357491 -15647165 - ROO_I LTR Pao -5213 3043 2312 9 686 250 33 0 0 chrUextra 13357747 13357777 -15646879 + Baggins1 LINE LOA 4727 4756 -697 9 686 693 103 241 0 chrUextra 13357785 13357930 -15646726 + FB4_DM DNA Tc1 3908 4087 -2 9 686 5938 6 1 0 chrUextra 13359257 13359976 -15644680 + QUASIMODO_I LTR Gypsy 1120 1839 -4221 9 686 5960 14 0 0 chrUextra 13360078 13360807 -15643849 + STALKER4_I LTR Gypsy 4647 5375 -1155 9 686 6182 3 0 0 chrUextra 13360907 13361636 -15643020 + ROO_I LTR Pao 1576 2304 -5952 9 686 27 29 0 0 chrUextra 13361894 13361928 -15642728 + AT_rich Low_complexity Low_complexity 1 34 0 9 686 250 33 0 0 chrUextra 13362167 13362197 -15642459 + Baggins1 LINE LOA 4727 4756 -697 9 686 693 103 241 0 chrUextra 13362205 13362350 -15642306 + FB4_DM DNA Tc1 3908 4087 -2 9 686 6229 3 1 3 chrUextra 13362565 13363294 -15641362 - LSU-rRNA_Dme rRNA rRNA -2315 1585 858 9 686 374 226 22 108 chrUextra 13363461 13363600 -15641056 - Gypsy12_LTR LTR Gypsy -1808 528 402 9 686 843 136 141 37 chrUextra 13363603 13363794 -15640862 - Gypsy12_LTR LTR Gypsy -2125 211 1 9 686 1660 78 106 3 chrUextra 13363793 13364123 -15640533 - Gypsy12_I LTR Gypsy 0 5546 5183 9 686 893 180 80 90 chrUextra 13364361 13364673 -15639983 + TIRANT_LTR LTR Gypsy 1 309 -108 9 686 5890 32 0 1 chrUextra 13365052 13365781 -15638875 - MDG1_I LTR Gypsy -2239 4357 3630 9 686 225 127 30 45 chrUextra 13365881 13365947 -15638709 + XDMR_DM Unknown Unknown 296 360 0 9 686 3086 170 11 13 chrUextra 13365912 13366610 -15638046 - SAR_DM Satellite Satellite -396 1076 380 9 686 4133 4 0 0 chrUextra 13366710 13367187 -15637469 - BARI_DM DNA Tc1 -755 973 497 9 686 1178 0 0 0 chrUextra 13367185 13367320 -15637336 - BARI_DM DNA Tc1 -1590 138 4 9 686 980 0 8 0 chrUextra 13367320 13367439 -15637217 - BARI_DM DNA Tc1 -1 1727 1608 9 686 5959 18 25 0 chrUextra 13367540 13368268 -15636388 + R1_DM LINE R1 1744 2489 -2867 9 686 6068 3 1 1 chrUextra 13368368 13369097 -15635559 + STALKER4_I LTR Gypsy 5445 6173 -357 9 85 5384 58 4 4 chrUextra 13369197 13369926 -15634730 - R1_DM LINE R1 -4623 733 5 9 687 4745 62 15 8 chrUextra 13370026 13370741 -15633915 - R1_DM LINE R1 -1091 4265 3681 9 687 6205 10 0 1 chrUextra 13370855 13371584 -15633072 - Gypsy4_I LTR Gypsy -4149 2139 1412 9 687 6333 1 0 0 chrUextra 13371684 13372413 -15632243 + FW_DM LINE Jockey 3613 4341 -351 9 687 2174 163 42 14 chrUextra 13372513 13373012 -15631644 + SAR_DM Satellite Satellite 391 903 -569 9 687 1006 95 0 0 chrUextra 13373019 13373177 -15631479 - ARS406_DM Unknown Unknown -195 158 1 9 687 863 210 0 5 chrUextra 13373027 13373242 -15631414 + SAR_DM Satellite Satellite 496 709 -763 9 687 6279 1 0 0 chrUextra 13373342 13374071 -15630585 - R1_DM LINE R1 -2076 3280 2552 9 687 2684 210 31 15 chrUextra 13374171 13374896 -15629760 - SAR_DM Satellite Satellite -593 736 1 9 687 6256 3 1 0 chrUextra 13375000 13375729 -15628927 + MDG3_I LTR Gypsy 1038 1767 -3219 9 687 5750 19 37 0 chrUextra 13375829 13376558 -15628098 - STALKER4_I LTR Gypsy -3458 3072 2317 9 687 870 177 10 10 chrUextra 13376658 13376858 -15627798 + SAR_DM Satellite Satellite 333 532 -940 9 687 2303 80 32 20 chrUextra 13376864 13377280 -15627376 - Gypsy6A_LTR LTR Gypsy 0 420 1 9 687 916 0 0 0 chrUextra 13377282 13377387 -15627269 - Gypsy6_I LTR Gypsy 0 7012 6908 9 687 3384 174 6 6 chrUextra 13377487 13378215 -15626441 + SAR_DM Satellite Satellite 334 1061 -411 9 687 6054 10 0 0 chrUextra 13378316 13379045 -15625611 - STALKER4_I LTR Gypsy -3906 2624 1896 9 687 4121 113 7 36 chrUextra 13379159 13379874 -15624782 + TART LINE telomeric 5323 6016 -8461 9 687 2818 176 25 23 chrUextra 13379975 13380702 -15623954 - SAR_DM Satellite Satellite -371 1101 374 9 687 6103 6 0 0 chrUextra 13380803 13381532 -15623124 + STALKER4_I LTR Gypsy 4705 5433 -1097 9 687 5963 23 1 0 chrUextra 13381632 13382361 -15622295 - R1_DM LINE R1 -1707 3649 2920 9 687 3648 110 28 62 chrUextra 13382461 13383170 -15621486 - HETA LINE telomeric -4987 1094 410 9 687 6381 3 0 0 chrUextra 13383290 13384019 -15620637 - SSU-rRNA_Dme rRNA rRNA -1003 992 264 9 687 4622 16 15 1 chrUextra 13384119 13384847 -15619809 + TAHRE LINE telomeric 8436 9492 -971 9 687 606 14 0 0 chrUextra 13384948 13385021 -15619635 - NTS_DM Other Other -130 110 38 9 687 817 0 0 0 chrUextra 13385021 13385117 -15619539 - NTS_DM Other Other -107 133 38 9 687 832 9 9 27 chrUextra 13385117 13385228 -15619428 - NTS_DM Other Other -107 133 25 9 687 21 57 0 0 chrUextra 13385254 13385289 -15619367 + AT_rich Low_complexity Low_complexity 1 35 0 9 687 1252 18 0 6 chrUextra 13385289 13385454 -15619202 - NTS_DM Other Other -39 201 38 9 687 852 18 0 27 chrUextra 13385454 13385566 -15619090 - NTS_DM Other Other -107 133 25 9 687 385 35 0 17 chrUextra 13385618 13385677 -15618979 - NTS_DM Other Other -39 201 144 9 687 5981 15 0 1 chrUextra 13385793 13386506 -15618150 + Gypsy4_I LTR Gypsy 374 1085 -5203 9 687 753 10 10 30 chrUextra 13386606 13386707 -15617949 - NTS_DM Other Other -117 123 25 9 687 21 57 0 0 chrUextra 13386733 13386768 -15617888 + AT_rich Low_complexity Low_complexity 1 35 0 9 687 1252 18 0 6 chrUextra 13386768 13386933 -15617723 - NTS_DM Other Other -39 201 38 9 687 870 9 0 27 chrUextra 13386933 13387045 -15617611 - NTS_DM Other Other -107 133 25 9 687 1252 18 0 6 chrUextra 13387097 13387262 -15617394 - NTS_DM Other Other -39 201 38 9 687 506 14 27 0 chrUextra 13387262 13387335 -15617321 - NTS_DM Other Other -107 133 59 9 687 5294 8 2 0 chrUextra 13387435 13388055 -15616601 - DM1731_I LTR Copia -3355 621 1 9 687 829 55 0 0 chrUextra 13388055 13388164 -15616492 - DM1731_LTR LTR Copia 0 336 228 9 687 32 0 0 0 chrUextra 13388399 13388431 -15616225 + AT_rich Low_complexity Low_complexity 1 32 0 9 687 28 48 0 0 chrUextra 13388759 13388801 -15615855 + AT_rich Low_complexity Low_complexity 1 42 0 9 687 4633 93 1 3 chrUextra 13389093 13389801 -15614855 + BATUMI_I LTR Pao 3782 4564 -3350 9 687 294 26 26 0 chrUextra 13389784 13389822 -15614834 + BATUMI_I LTR Pao 4315 4353 -3610 9 687 6557 3 0 0 chrUextra 13389922 13390651 -15614005 - DOC LINE Jockey -1619 3106 2378 9 687 3846 0 2 0 chrUextra 13390751 13391180 -15613476 + DOC LINE Jockey 1005 1434 -3291 9 687 1032 0 0 20 chrUextra 13391194 13391343 -15613313 + DOC LINE Jockey 4580 4725 0 9 687 893 30 22 15 chrUextra 13391344 13391480 -15613176 - STALKER4_I LTR Gypsy -195 6335 6199 9 687 201 121 0 0 chrUextra 13391757 13391790 -15612866 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 687 1552 11 0 26 chrUextra 13392409 13392599 -15612057 + DM1731_I LTR Copia 3792 3976 0 9 687 2802 36 0 0 chrUextra 13392599 13392935 -15611721 + DM1731_LTR LTR Copia 1 336 0 9 687 1232 94 128 24 chrUextra 13392935 13393138 -15611518 + PROTOP DNA P 503 731 -3749 9 687 1343 112 51 17 chrUextra 13393238 13393474 -15611182 - MDG1_I LTR Gypsy -6352 244 1 9 687 1954 97 74 3 chrUextra 13393474 13393772 -15610884 - MDG1_LTR LTR Gypsy -30 412 94 9 687 339 105 0 0 chrUextra 13393774 13393831 -15610825 + (TTA)n Simple_repeat Simple_repeat 3 59 0 9 687 666 86 76 0 chrUextra 13393858 13393963 -15610693 + DM176_I LTR Gypsy 2360 2472 -3948 9 687 2515 0 4 0 chrUextra 13394520 13394796 -15609860 - SSU-rRNA_Dme rRNA rRNA 0 1995 1719 9 687 1840 21 17 13 chrUextra 13394911 13395150 -15609506 + NTS_DM Other Other 1 240 0 9 687 1926 4 17 13 chrUextra 13395150 13395389 -15609267 + NTS_DM Other Other 1 240 0 9 687 1337 12 0 18 chrUextra 13395389 13395554 -15609102 + NTS_DM Other Other 1 162 -78 9 687 711 122 0 0 chrUextra 13395725 13395832 -15608824 + DM176_I LTR Gypsy 6314 6420 0 9 687 255 215 11 151 chrUextra 13395888 13395981 -15608675 + DM176_LTR LTR Gypsy 190 269 -238 9 687 273 191 59 0 chrUextra 13396090 13396158 -15608498 + DM176_LTR LTR Gypsy 295 366 -141 9 687 608 148 40 16 chrUextra 13396175 13396299 -15608357 + DMTOM1_LTR LTR Gypsy 284 410 0 9 687 377 103 14 29 chrUextra 13396299 13396360 -15608296 + DMTOM1_LTR LTR Gypsy 349 408 -2 9 687 534 15 0 0 chrUextra 13396389 13396454 -15608202 - QUASIMODO_LTR LTR Gypsy 0 658 594 9 687 360 100 17 0 chrUextra 13396554 13396614 -15608042 - ARS406_DM Unknown Unknown -292 61 1 9 687 3314 183 4 6 chrUextra 13396574 13397267 -15607389 + SAR_DM Satellite Satellite 246 937 -535 9 687 1077 43 0 0 chrUextra 13397144 13397283 -15607373 - ARS406_DM Unknown Unknown -164 189 51 9 687 5667 33 0 0 chrUextra 13397420 13398112 -15606544 + IDEFIX_I LTR Gypsy 1 692 -4936 9 687 4831 7 0 0 chrUextra 13398215 13398762 -15605894 + FW_DM LINE Jockey 4143 4689 -3 9 687 278 139 66 0 chrUextra 13398787 13398938 -15605718 + T-rich Low_complexity Low_complexity 5 165 0 9 687 1725 0 0 0 chrUextra 13399041 13399228 -15605428 + SSU-rRNA_Dme rRNA rRNA 1809 1995 0 9 687 21 89 0 0 chrUextra 13399247 13399303 -15605353 + AT_rich Low_complexity Low_complexity 1 56 0 9 687 6469 6 18 1 chrUextra 13399870 13400599 -15604057 - MDG3_I LTR Gypsy -3663 1323 583 9 687 505 333 18 18 chrUextra 13400712 13400935 -15603721 + Gypsy12_I LTR Gypsy 3147 3369 -2177 9 687 4377 44 17 53 chrUextra 13400778 13401378 -15603278 + CIRCE LINE Composite 1305 1882 -4474 9 687 22 35 0 0 chrUextra 13401632 13401661 -15602995 + AT_rich Low_complexity Low_complexity 1 29 0 9 687 35 41 0 0 chrUextra 13401762 13401811 -15602845 + AT_rich Low_complexity Low_complexity 1 49 0 9 687 28 48 0 0 chrUextra 13402166 13402208 -15602448 + AT_rich Low_complexity Low_complexity 1 42 0 9 687 4629 12 2 0 chrUextra 13402357 13402873 -15601783 - Invader1_I LTR Gypsy -2669 517 1 9 687 1900 14 0 0 chrUextra 13402873 13403086 -15601570 - Invader1_LTR LTR Gypsy 0 423 211 9 687 3240 182 10 11 chrUextra 13403186 13403915 -15600741 + SAR_DM Satellite Satellite 256 983 -489 9 687 4031 18 15 1 chrUextra 13404018 13404744 -15599912 + PROTOP_A DNA P 145 928 -177 9 687 21 0 0 0 chrUextra 13404868 13404889 -15599767 + AT_rich Low_complexity Low_complexity 1 21 0 9 687 6553 3 1 0 chrUextra 13406502 13407231 -15597425 + DOC LINE Jockey 2952 3681 -1044 9 687 3686 198 1 1 chrUextra 13407333 13408058 -15596598 + ROVER-I_DM LTR Gypsy 2963 3687 -2897 9 687 368 0 68 51 chrUextra 13408160 13408219 -15596437 + NTS_DM Other Other 181 240 0 9 687 1345 6 0 18 chrUextra 13408219 13408384 -15596272 + NTS_DM Other Other 1 162 -78 9 687 514 119 36 0 chrUextra 13408494 13408578 -15596078 + NTS_DM Other Other 4 90 -150 9 687 25 51 0 0 chrUextra 13408850 13408889 -15595767 + AT_rich Low_complexity Low_complexity 1 39 0 9 687 4001 65 32 22 chrUextra 13408989 13409717 -15594939 - PROTOP_A DNA P -27 1126 395 9 687 6445 0 1 0 chrUextra 13409818 13410547 -15594109 + LSU-rRNA_Dme rRNA rRNA 362 1091 -2809 9 687 2393 88 34 21 chrUextra 13410647 13411039 -15593617 + Gypsy6A_LTR LTR Gypsy 25 420 0 9 687 2127 46 27 101 chrUextra 13411039 13411376 -15593280 + Gypsy6_I LTR Gypsy 1 312 -6700 9 687 6458 3 1 1 chrUextra 13411476 13412205 -15592451 - R1_DM LINE R1 -3672 1684 956 9 687 524 126 0 11 chrUextra 13412634 13412722 -15591934 + G3_DM LINE Jockey 103 189 -4416 9 687 241 169 117 17 chrUextra 13412713 13412773 -15591883 + G3_DM LINE Jockey 364 429 -4176 9 687 384 138 92 0 chrUextra 13412817 13412882 -15591774 + G3_DM LINE Jockey 509 579 -4026 9 687 6507 7 0 0 chrUextra 13413134 13413863 -15590793 - Invader2_I LTR Gypsy -3145 1447 719 9 687 3133 187 16 21 chrUextra 13413964 13414688 -15589968 - SAR_DM Satellite Satellite -610 720 1 9 687 3192 174 14 19 chrUextra 13414793 13415491 -15589165 - SAR_DM Satellite Satellite -593 879 185 9 687 704 173 0 0 chrUextra 13415388 13415521 -15589135 + ARS406_DM Unknown Unknown 1 133 -220 9 687 4532 95 6 9 chrUextra 13415621 13416350 -15588306 - BATUMI_I LTR Pao -2834 5080 4281 9 687 6076 21 6 7 chrUextra 13416451 13417179 -15587477 - DMRT1B LINE R1 -350 4833 4107 9 687 6114 1 0 0 chrUextra 13417279 13417944 -15586712 - SSU-rRNA_Dme rRNA rRNA -1330 665 1 9 687 6488 16 0 0 chrUextra 13418108 13418837 -15585819 + Gypsy6_I LTR Gypsy 6140 6868 -144 9 687 3140 172 27 18 chrUextra 13418937 13419647 -15585009 + SAR_DM Satellite Satellite 404 1119 -353 9 687 327 214 29 19 chrUextra 13419561 13419666 -15584990 - XDMR_DM Unknown Unknown 0 360 255 9 687 6430 3 0 0 chrUextra 13419766 13420495 -15584161 - DM176_I LTR Gypsy -906 5514 4786 9 687 2870 264 4 4 chrUextra 13420595 13421324 -15583332 - TIRANT_I LTR Gypsy -3547 4145 3417 9 687 6430 4 0 0 chrUextra 13421424 13422153 -15582503 + STALKER4_I LTR Gypsy 4558 5286 -1244 9 687 6631 0 1 1 chrUextra 13422253 13422982 -15581674 - SSU-rRNA_Dme rRNA rRNA -1040 955 227 9 687 5305 0 0 0 chrUextra 13423082 13423675 -15580981 + BARI_DM DNA Tc1 1135 1727 -1 9 687 1238 0 0 0 chrUextra 13423675 13423811 -15580845 + BARI_DM DNA Tc1 4 139 -1589 9 687 6383 12 0 1 chrUextra 13423911 13424640 -15580016 - Copia2_I LTR Copia -2362 1800 1073 9 687 2578 36 3 0 chrUextra 13425148 13425456 -15579200 - PROTOP DNA P 0 4480 4172 9 687 6277 4 1 0 chrUextra 13425569 13426298 -15578358 + DM176_I LTR Gypsy 1664 2393 -4027 9 687 1492 292 8 6 chrUextra 13426605 13427119 -15577537 + ROVER-I_DM LTR Gypsy 507 1360 -5224 9 687 6510 0 0 0 chrUextra 13427227 13427956 -15576700 - DM176_I LTR Gypsy -716 5704 4976 9 687 6441 0 0 1 chrUextra 13428058 13428785 -15575871 + ROO_I LTR Pao 2565 3290 -4966 9 687 1962 164 15 2 chrUextra 13428885 13429288 -15575368 - SAR_DM Satellite Satellite -677 795 388 9 687 1361 182 22 6 chrUextra 13429299 13429614 -15575042 - SAR_DM Satellite Satellite -672 800 481 9 687 6505 0 0 0 chrUextra 13429714 13430443 -15574213 + STALKER4_I LTR Gypsy 4538 5266 -1264 9 687 6420 1 1 0 chrUextra 13430543 13431272 -15573384 - DM176_I LTR Gypsy -3610 2810 2081 9 687 1479 272 25 24 chrUextra 13431374 13432098 -15572558 - STALKER4_I LTR Gypsy -2920 3610 2886 9 687 6006 1 0 36 chrUextra 13432201 13432929 -15571727 - LSU-rRNA_Dme rRNA rRNA -3183 717 16 9 687 364 315 36 36 chrUextra 13433033 13433254 -15571402 - DM1731_I LTR Copia -2370 1606 1386 9 687 2703 98 8 19 chrUextra 13433867 13434588 -15570068 + DMSAT6 Satellite Satellite 1 712 0 9 687 4450 114 105 0 chrUextra 13434691 13435417 -15569239 + TART_B1 LINE telomeric 5424 6225 -4429 9 687 6576 3 0 0 chrUextra 13436346 13437075 -15567581 - R1_DM LINE R1 -2369 2987 2259 9 687 4599 23 84 0 chrUextra 13437175 13437904 -15566752 + FW_DM LINE Jockey 2985 3774 -918 9 687 3256 170 31 15 chrUextra 13438004 13438733 -15565923 + SAR_DM Satellite Satellite 1 740 -411 9 687 999 301 30 38 chrUextra 13438838 13439553 -15565103 - SAR_DM Satellite Satellite -695 709 1 9 687 3528 176 7 8 chrUextra 13439662 13440391 -15564265 + SAR_DM Satellite Satellite 287 1014 -458 9 687 3372 161 11 25 chrUextra 13441325 13442049 -15562607 - SAR_DM Satellite Satellite -382 1090 377 9 687 4648 28 0 0 chrUextra 13442164 13442707 -15561949 - R1_DM LINE R1 -1890 3466 2924 9 687 1511 22 0 0 chrUextra 13442699 13442877 -15561779 - R1_DM LINE R1 -2544 2812 2635 9 687 2319 34 91 3 chrUextra 13442978 13443275 -15561381 - DMCR1A LINE CR1 -429 4041 3719 9 687 831 77 112 7 chrUextra 13443276 13443419 -15561237 + HMSBEAGLE_I LTR Gypsy 4755 4912 -1617 9 687 6100 10 1 1 chrUextra 13443807 13444536 -15560120 - R1_DM LINE R1 -1250 4106 3378 9 687 1227 0 7 0 chrUextra 13445465 13445609 -15559047 - SSU-rRNA_Dme rRNA rRNA -1850 145 1 9 687 32 0 0 0 chrUextra 13445741 13445773 -15558883 + AT_rich Low_complexity Low_complexity 1 32 0 9 687 28 48 0 0 chrUextra 13446101 13446143 -15558513 + AT_rich Low_complexity Low_complexity 1 42 0 9 687 6309 1 0 1 chrUextra 13446294 13447023 -15557633 + FW_DM LINE Jockey 1799 2526 -2166 9 687 5045 103 0 0 chrUextra 13447123 13447850 -15556806 - HMSBEAGLE_I LTR Gypsy -1034 5495 4769 9 687 5938 3 0 0 chrUextra 13447952 13448681 -15555975 - DM176_I LTR Gypsy -360 6060 5332 9 687 2831 195 15 18 chrUextra 13448783 13449510 -15555146 - SAR_DM Satellite Satellite -291 1181 457 9 687 6213 4 18 0 chrUextra 13449610 13450339 -15554317 + Gypsy4_I LTR Gypsy 1997 2738 -3550 9 687 5875 37 0 6 chrUextra 13450439 13451168 -15553488 + BATUMI_I LTR Pao 5308 6032 -1931 9 687 6248 6 0 0 chrUextra 13451268 13451997 -15552659 - R1_DM LINE R1 -1582 3774 3046 9 687 3025 213 15 5 chrUextra 13452926 13453655 -15551001 - ROVER-I_DM LTR Gypsy -3145 3439 2840 9 687 1844 168 179 29 chrUextra 13453755 13454484 -15550172 + HETA LINE telomeric 5198 5723 -358 9 687 6374 0 3 0 chrUextra 13454584 13455313 -15549343 + LSU-rRNA_Dme rRNA rRNA 2884 3614 -286 9 687 5988 6 15 1 chrUextra 13455413 13456142 -15548514 + R1_DM LINE R1 630 1368 -3988 9 687 3588 9 2 0 chrUextra 13456242 13456662 -15547994 + Invader1_LTR LTR Gypsy 3 423 0 9 687 2689 7 0 0 chrUextra 13456662 13456971 -15547685 + Invader1_I LTR Gypsy 1 309 -2877 9 687 1620 13 0 0 chrUextra 13457071 13457299 -15547357 + (CACAA)n Simple_repeat Simple_repeat 1 228 0 9 687 3904 9 0 0 chrUextra 13457335 13457800 -15546856 + DMRT1B LINE R1 331 795 -4388 9 687 2300 18 4 0 chrUextra 13457900 13458176 -15546480 - Copia2_I LTR Copia -769 3393 3117 9 687 22 35 0 0 chrUextra 13458210 13458239 -15546417 + AT_rich Low_complexity Low_complexity 1 29 0 9 687 51 31 0 0 chrUextra 13458414 13458479 -15546177 + AT_rich Low_complexity Low_complexity 1 65 0 9 687 3153 180 10 8 chrUextra 13458732 13459456 -15545200 + SAR_DM Satellite Satellite 282 1006 -466 9 687 1252 18 0 6 chrUextra 13459604 13459769 -15544887 - NTS_DM Other Other -39 201 38 9 687 870 9 0 27 chrUextra 13459769 13459881 -15544775 - NTS_DM Other Other -107 133 25 9 687 22 56 0 0 chrUextra 13459907 13459943 -15544713 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 230 150 0 0 chrUextra 13459956 13459996 -15544660 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13460039 13460079 -15544577 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13460131 13460171 -15544485 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13460223 13460263 -15544393 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 6358 3 0 0 chrUextra 13462043 13462769 -15541887 - LINEJ1_DM LINE Jockey -134 4886 4161 9 687 23 68 0 0 chrUextra 13462885 13462929 -15541727 + AT_rich Low_complexity Low_complexity 1 44 0 9 687 26 30 0 0 chrUextra 13462975 13463008 -15541648 + AT_rich Low_complexity Low_complexity 1 33 0 9 687 1740 38 0 0 chrUextra 13463386 13463597 -15541059 - PROTOP_B DNA P 0 1153 943 9 687 656 181 0 0 chrUextra 13463697 13463830 -15540826 - ARS406_DM Unknown Unknown -220 133 1 9 687 2760 180 36 20 chrUextra 13463727 13464423 -15540233 + SAR_DM Satellite Satellite 185 891 -581 9 687 1091 67 127 0 chrUextra 13464525 13464690 -15539966 + TART LINE telomeric 1674 1859 -12618 9 687 4397 45 5 0 chrUextra 13464681 13465253 -15539403 + TART LINE telomeric 2045 2619 -11858 9 687 6235 0 3 4 chrUextra 13465353 13466081 -15538575 + SSU-rRNA_Dme rRNA rRNA 1062 1788 -207 9 687 6211 0 0 3 chrUextra 13466181 13466909 -15537747 + DOC LINE Jockey 2880 3605 -1120 9 687 6232 0 0 1 chrUextra 13467009 13467737 -15536919 + LSU-rRNA_Dme rRNA rRNA 526 1252 -2648 9 687 1069 115 138 5 chrUextra 13468121 13468331 -15536325 - DNAREP1_DM LINE Penelope -356 238 1 9 687 2700 9 3 0 chrUextra 13468689 13469009 -15535647 + MAX_LTR LTR Pao 1 321 0 9 687 3172 3 0 0 chrUextra 13469027 13469393 -15535263 - MAX_I LTR Pao -2378 5536 5171 9 687 224 0 0 162 chrUextra 13469962 13470172 -15534484 + (TTATG)n Simple_repeat Simple_repeat 4 179 0 9 687 1021 89 0 0 chrUextra 13470324 13470482 -15534174 + ARS406_DM Unknown Unknown 1 158 -195 9 687 2702 159 9 7 chrUextra 13470489 13471046 -15533610 - SAR_DM Satellite Satellite -569 903 346 9 687 4198 2 2 10 chrUextra 13471149 13471653 -15533003 + LSU-rRNA_Dme rRNA rRNA 3401 3900 0 9 687 22 56 0 0 chrUextra 13471725 13471761 -15532895 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 246 150 0 0 chrUextra 13471766 13471806 -15532850 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 687 677 213 0 7 chrUextra 13472146 13472288 -15532368 - HETRP_DM Satellite Satellite -203 1669 1529 9 687 689 206 0 7 chrUextra 13472455 13472597 -15532059 - HETRP_DM Satellite Satellite -203 1669 1529 9 687 5064 64 18 3 chrUextra 13472811 13473520 -15531136 - QUASIMODO_I LTR Gypsy -5311 749 30 9 687 6110 14 0 0 chrUextra 13473633 13474361 -15530295 - Invader3_I LTR Gypsy -1414 3474 2747 9 687 5781 41 1 0 chrUextra 13474462 13475189 -15529467 + BATUMI_I LTR Pao 4406 5133 -2830 9 687 1397 22 0 6 chrUextra 13475289 13475469 -15529187 - NTS_DM Other Other -61 179 1 9 687 1391 25 20 20 chrUextra 13475469 13475672 -15528984 - NTS_DM Other Other 0 240 38 9 687 817 0 0 0 chrUextra 13475672 13475768 -15528888 - NTS_DM Other Other -107 133 38 9 687 832 9 9 27 chrUextra 13475768 13475879 -15528777 - NTS_DM Other Other -107 133 25 9 687 21 57 0 0 chrUextra 13475905 13475940 -15528716 + AT_rich Low_complexity Low_complexity 1 35 0 9 687 473 40 0 13 chrUextra 13475940 13476017 -15528639 - NTS_DM Other Other -39 201 126 9 687 5356 45 19 0 chrUextra 13476117 13476845 -15527811 - R1_DM LINE R1 -4303 1053 312 9 687 3203 183 8 8 chrUextra 13476945 13477673 -15526983 - SAR_DM Satellite Satellite -489 983 256 9 687 1488 54 0 4 chrUextra 13477773 13478501 -15526155 + (ATAAG)n Simple_repeat Simple_repeat 1 725 0 9 687 6248 3 0 0 chrUextra 13478601 13479329 -15525327 - ROO_I LTR Pao -337 7919 7192 9 687 3194 171 10 10 chrUextra 13479432 13480146 -15524510 - SAR_DM Satellite Satellite -535 937 224 9 687 468 84 0 0 chrUextra 13480084 13480155 -15524501 + ARS406_DM Unknown Unknown 1 71 -282 9 687 6015 21 0 1 chrUextra 13480257 13480985 -15523671 + R1_DM LINE R1 1951 2677 -2679 9 687 2819 187 26 25 chrUextra 13481089 13481810 -15522846 + SAR_DM Satellite Satellite 1 721 -224 9 687 409 0 0 56 chrUextra 13481913 13481967 -15522689 - NTS_DM Other Other -165 75 25 9 687 22 56 0 0 chrUextra 13481993 13482029 -15522627 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 4699 2 2 0 chrUextra 13482102 13482641 -15522015 - LSU-rRNA_Dme rRNA rRNA 0 3900 3361 9 687 6308 0 1 3 chrUextra 13483569 13484297 -15520359 - SSU-rRNA_Dme rRNA rRNA -27 1968 1242 9 687 487 47 129 0 chrUextra 13484444 13484529 -15520127 + MAX_I LTR Pao 820 915 -6999 9 687 4579 36 0 5 chrUextra 13484546 13485125 -15519531 + MAX_I LTR Pao 2502 3077 -4837 9 687 6324 0 0 0 chrUextra 13485225 13485953 -15518703 - DMRT1B LINE R1 -2574 2609 1882 9 687 6371 1 1 0 chrUextra 13486053 13486781 -15517875 - LSU-rRNA_Dme rRNA rRNA -199 3701 2973 9 687 47 0 0 0 chrUextra 13487308 13487355 -15517301 + AT_rich Low_complexity Low_complexity 1 47 0 9 687 6086 11 0 0 chrUextra 13487709 13488437 -15516219 + IDEFIX_I LTR Gypsy 971 1698 -3930 9 687 326 43 0 60 chrUextra 13488537 13488587 -15516069 - NTS_DM Other Other -169 71 25 9 687 1252 18 0 6 chrUextra 13488639 13488804 -15515852 - NTS_DM Other Other -39 201 38 9 687 870 9 0 27 chrUextra 13488804 13488916 -15515740 - NTS_DM Other Other -107 133 25 9 687 22 56 0 0 chrUextra 13488942 13488978 -15515678 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 255 125 0 0 chrUextra 13488991 13489031 -15515625 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13489074 13489114 -15515542 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13489166 13489206 -15515450 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 2345 104 14 21 chrUextra 13489365 13490072 -15514584 - DMSAT6 Satellite Satellite -98 701 1 9 687 6353 3 1 0 chrUextra 13490193 13490921 -15513735 - LSU-rRNA_Dme rRNA rRNA -168 3732 3004 9 687 6319 0 0 1 chrUextra 13491021 13491749 -15512907 - QUASIMODO_I LTR Gypsy -5326 734 8 9 687 5299 29 45 1 chrUextra 13491849 13492577 -15512079 - QUASIMODO_I LTR Gypsy -4522 1538 779 9 687 6078 0 3 3 chrUextra 13492677 13493405 -15511251 + BURDOCK_I LTR Gypsy 4602 5329 -531 9 687 1771 319 6 7 chrUextra 13493524 13494232 -15510424 - GTWIN_I LTR Gypsy -2779 3642 2936 9 687 5832 23 26 0 chrUextra 13494333 13495061 -15509595 + FW_DM LINE Jockey 3106 3852 -840 9 687 507 182 0 0 chrUextra 13495162 13495288 -15509368 + (TTATG)n Simple_repeat Simple_repeat 4 129 0 9 687 3282 164 11 11 chrUextra 13495994 13496716 -15507940 - SAR_DM Satellite Satellite -425 1047 326 9 687 3375 160 10 8 chrUextra 13496817 13497528 -15507128 - SAR_DM Satellite Satellite -435 1037 326 9 687 6252 0 0 0 chrUextra 13497645 13498373 -15506283 + BLOOD_I LTR Gypsy 1739 2466 -4147 9 687 5847 15 1 0 chrUextra 13498473 13499201 -15505455 + STALKER4_I LTR Gypsy 2683 3411 -3119 9 687 6129 0 0 0 chrUextra 13499301 13499998 -15504658 + NOMAD_I LTR Gypsy 953 1649 -4923 9 687 256 0 0 0 chrUextra 13500000 13500029 -15504627 + NOMAD_I LTR Gypsy 1652 1680 -4892 9 687 501 25 0 0 chrUextra 13500129 13500208 -15504448 + FW_DM LINE Jockey 4610 4688 -4 9 85 5004 43 1 1 chrUextra 13500209 13500857 -15503799 - R1_DM LINE R1 -3966 1390 743 9 688 4115 58 0 12 chrUextra 13500957 13501551 -15503105 + MDG1_I LTR Gypsy 5618 6204 -392 9 688 372 97 127 16 chrUextra 13501544 13501670 -15502986 + MDG1_I LTR Gypsy 6395 6534 -62 9 688 3461 148 96 6 chrUextra 13501785 13502511 -15502145 + IDEFIX_I LTR Gypsy 3071 3862 -1766 9 688 854 9 0 0 chrUextra 13502613 13502718 -15501938 - NTS_DM Other Other -98 142 38 9 688 870 9 0 27 chrUextra 13502718 13502830 -15501826 - NTS_DM Other Other -107 133 25 9 688 1252 18 0 6 chrUextra 13502882 13503047 -15501609 - NTS_DM Other Other -39 201 38 9 688 870 9 0 27 chrUextra 13503047 13503159 -15501497 - NTS_DM Other Other -107 133 25 9 688 22 56 0 0 chrUextra 13503185 13503221 -15501435 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 243 125 0 0 chrUextra 13503234 13503274 -15501382 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 549 35 0 158 chrUextra 13503441 13503542 -15501114 - MAX_I LTR Pao -7829 85 1 9 688 1705 120 70 0 chrUextra 13503542 13503842 -15500814 - MAX_LTR LTR Pao 0 321 1 9 688 1297 198 6 12 chrUextra 13503842 13504169 -15500487 - SAR_DM Satellite Satellite -484 988 664 9 688 2925 158 30 23 chrUextra 13504271 13504997 -15499659 + SAR_DM Satellite Satellite 1 731 -416 9 688 1196 262 58 48 chrUextra 13505116 13505817 -15498839 + SAR_DM Satellite Satellite 326 1033 -439 9 688 968 52 15 0 chrUextra 13505925 13506061 -15498595 - BATUMI_I LTR Pao -1399 6564 6427 9 688 1688 68 0 4 chrUextra 13506084 13506334 -15498322 + BATUMI_I LTR Pao 7303 7551 -412 9 688 1836 82 0 7 chrUextra 13506313 13506584 -15498072 + BATUMI_I LTR Pao 7695 7963 0 9 688 363 57 239 14 chrUextra 13506584 13506652 -15498004 + BATUMI_I LTR Pao 7002 7085 -878 9 688 21 89 0 0 chrUextra 13507040 13507096 -15497560 + AT_rich Low_complexity Low_complexity 1 56 0 9 688 5580 18 3 15 chrUextra 13507581 13508298 -15496358 - BATUMI_I LTR Pao -4633 3330 2623 9 688 5890 22 1 1 chrUextra 13508413 13509137 -15495519 + R1_DM LINE R1 3791 4514 -842 9 688 1539 0 0 0 chrUextra 13509237 13509408 -15495248 + (TCTTG)n Simple_repeat Simple_repeat 5 175 0 9 688 4418 2 0 0 chrUextra 13509408 13509914 -15494742 - TABOR_LTR LTR Gypsy 0 506 1 9 688 426 0 0 0 chrUextra 13509912 13509965 -15494691 - TABOR_I LTR Gypsy 0 6336 6284 9 688 6257 0 0 3 chrUextra 13510065 13510793 -15493863 + ROO_I LTR Pao 7037 7762 -494 9 688 501 57 0 0 chrUextra 13510893 13510963 -15493693 - BATUMI_I LTR Pao -1467 6496 6427 9 688 5196 9 0 5 chrUextra 13510986 13511621 -15493035 + BATUMI_I LTR Pao 7303 7934 -29 9 688 4863 58 3 51 chrUextra 13511721 13512448 -15492208 + BATUMI_I LTR Pao 2434 3125 -4838 9 688 3221 175 10 10 chrUextra 13512549 13513277 -15491379 - SAR_DM Satellite Satellite -489 983 256 9 688 820 19 0 28 chrUextra 13513377 13513485 -15491171 - NTS_DM Other Other -111 129 25 9 688 4780 12 2 2 chrUextra 13513531 13514102 -15490554 - DM412B_LTR LTR Gypsy 0 571 1 9 688 569 212 0 0 chrUextra 13514205 13514337 -15490319 - ARS406_DM Unknown Unknown -221 132 1 9 688 2665 184 19 23 chrUextra 13514240 13514930 -15489726 + SAR_DM Satellite Satellite 191 877 -595 9 688 307 191 14 14 chrUextra 13515046 13515115 -15489541 + HETRP_DM Satellite Satellite 1601 1669 -203 9 688 658 217 0 32 chrUextra 13515232 13515389 -15489267 + HETRP_DM Satellite Satellite 1518 1669 -203 9 688 657 186 7 14 chrUextra 13515527 13515669 -15488987 + HETRP_DM Satellite Satellite 1529 1669 -203 9 688 6001 14 1 1 chrUextra 13515862 13516589 -15488067 + R1_DM LINE R1 3387 4113 -1243 9 688 1383 6 0 54 chrUextra 13516689 13516875 -15487781 - DM176_LTR LTR Gypsy -331 176 1 9 688 1861 77 4 0 chrUextra 13517156 13517417 -15487239 + Baggins1 LINE LOA 4762 5023 -430 9 688 5837 21 33 0 chrUextra 13517519 13518245 -15486411 - FW_DM LINE Jockey -3426 1266 517 9 688 2946 191 17 20 chrUextra 13518345 13519073 -15485583 + SAR_DM Satellite Satellite 1 725 -208 9 688 5142 80 3 13 chrUextra 13520016 13520729 -15483927 - Gypsy12_I LTR Gypsy 0 5546 4841 9 688 6370 1 1 0 chrUextra 13520829 13521557 -15483099 + LSU-rRNA_Dme rRNA rRNA 3055 3783 -117 9 688 5945 25 0 1 chrUextra 13521657 13522385 -15482271 + R1_DM LINE R1 2139 2865 -2491 9 688 1302 250 35 40 chrUextra 13522487 13522568 -15482088 - SAR_DM Satellite Satellite -675 797 600 9 688 2495 69 3 0 chrUextra 13522568 13522928 -15481728 + XDMR Unknown Unknown 1 361 0 9 688 1932 71 3 0 chrUextra 13522928 13523210 -15481446 + XDMR Unknown Unknown 1 283 -78 9 688 1302 250 35 40 chrUextra 13522928 13523088 -15481568 - SAR_DM Satellite Satellite -675 599 200 9 688 3090 185 7 7 chrUextra 13523321 13524029 -15480627 - SAR_DM Satellite Satellite -396 1076 369 9 688 3271 5 0 0 chrUextra 13524141 13524517 -15480139 - LSU-rRNA_Dme rRNA rRNA -947 2953 2578 9 688 3019 6 0 0 chrUextra 13524519 13524869 -15479787 - R2_DM LINE R2 0 3607 3258 9 688 3162 5 0 60 chrUextra 13524969 13525384 -15479272 - LSU-rRNA_Dme rRNA rRNA -3510 390 1 9 688 21 95 0 0 chrUextra 13525396 13525459 -15479197 + AT_rich Low_complexity Low_complexity 1 63 0 9 688 6244 0 0 0 chrUextra 13525797 13526525 -15478131 + FW_DM LINE Jockey 2646 3373 -1319 9 688 800 80 0 17 chrUextra 13526627 13526977 -15477679 + RSP Satellite Satellite 1 344 0 9 688 893 98 6 18 chrUextra 13527016 13527353 -15477303 + RSP Satellite Satellite 1 333 -1 9 688 2410 18 0 0 chrUextra 13527453 13527739 -15476917 - MAX_I LTR Pao -1191 6723 6438 9 688 3563 52 0 0 chrUextra 13527719 13528181 -15476475 - MAX_I LTR Pao -2182 5732 5271 9 688 609 299 100 0 chrUextra 13528293 13528584 -15476072 + DM1731_I LTR Copia 1819 2138 -1838 9 688 244 277 22 65 chrUextra 13528781 13528920 -15475736 + DM1731_I LTR Copia 2269 2401 -1575 9 688 2778 78 65 0 chrUextra 13529110 13529508 -15475148 - Gypsy12_I LTR Gypsy -658 4888 4465 9 688 2135 110 3 12 chrUextra 13529505 13529827 -15474829 - Gypsy12_I LTR Gypsy -3725 1821 1503 9 688 4998 41 1 54 chrUextra 13529937 13530665 -15473991 - BATUMI_I LTR Pao -4739 3224 2535 9 688 652 0 0 0 chrUextra 13530765 13530840 -15473816 + ROO_I LTR Pao 6999 7073 -1183 9 688 5702 1 0 0 chrUextra 13530830 13531493 -15473163 + ROO_I LTR Pao 7208 7870 -386 9 688 824 20 10 0 chrUextra 13531593 13531694 -15472962 - Gypsy_LTR LTR Gypsy -380 102 1 9 688 5313 13 0 0 chrUextra 13531694 13532319 -15472337 - Gypsy_I LTR Gypsy 0 6507 5883 9 688 6120 0 1 0 chrUextra 13532421 13533149 -15471507 - TABOR_I LTR Gypsy -4634 1702 974 9 688 1133 8 0 7 chrUextra 13533249 13533384 -15471272 + (CAAGA)n Simple_repeat Simple_repeat 5 138 0 9 688 4418 2 0 0 chrUextra 13533384 13533890 -15470766 + TABOR_LTR LTR Gypsy 1 506 0 9 688 717 0 0 0 chrUextra 13533890 13533977 -15470679 + TABOR_I LTR Gypsy 1 87 -6249 9 688 1599 6 3 0 chrUextra 13534077 13534415 -15470241 + (CTTAT)n Simple_repeat Simple_repeat 1 339 0 9 688 198 0 0 0 chrUextra 13534415 13534437 -15470219 + (TTA)n Simple_repeat Simple_repeat 3 24 0 9 688 3023 0 0 0 chrUextra 13534437 13534805 -15469851 - I_DM LINE I -774 5457 5090 9 688 1853 59 15 15 chrUextra 13534991 13535250 -15469406 + DMCR1A LINE CR1 1624 1882 -2588 9 688 2931 47 24 0 chrUextra 13535250 13535633 -15469023 - DMCR1A LINE CR1 -954 3516 3125 9 688 6226 3 1 3 chrUextra 13535733 13536461 -15468195 - LSU-rRNA_Dme rRNA rRNA -2312 1588 862 9 688 5919 22 3 7 chrUextra 13536561 13537289 -15467367 + BATUMI_I LTR Pao 5629 6353 -1610 9 688 2086 26 8 0 chrUextra 13537403 13537668 -15466988 + MDG3_LTR LTR Gypsy 1 267 0 9 688 3872 2 0 0 chrUextra 13537667 13538117 -15466539 + MDG3_I LTR Gypsy 1 450 -4536 9 688 2675 197 14 25 chrUextra 13538217 13538941 -15465715 + SAR_DM Satellite Satellite 457 1172 -300 9 688 2149 48 50 9 chrUextra 13539045 13539384 -15465272 + PROTOP DNA P 471 823 -3657 9 688 2961 30 2 0 chrUextra 13539379 13539773 -15464883 + PROTOP DNA P 3802 4196 -284 9 688 5918 11 16 0 chrUextra 13539873 13540601 -15464055 + Invader2_I LTR Gypsy 236 975 -3617 9 688 6203 7 1 0 chrUextra 13540701 13541429 -15463227 + R1_DM LINE R1 4591 5319 -37 9 688 4170 72 113 6 chrUextra 13541529 13542181 -15462475 - BATUMI_I LTR Pao -6279 1684 963 9 688 35 71 0 0 chrUextra 13542187 13542257 -15462399 + AT_rich Low_complexity Low_complexity 1 70 0 9 688 6171 1 1 1 chrUextra 13542357 13543085 -15461571 + ROO_I LTR Pao 1252 1979 -6277 9 688 4298 17 7 0 chrUextra 13543185 13543727 -15460929 - PROTOP DNA P -163 4317 3772 9 688 1535 11 5 5 chrUextra 13543724 13543913 -15460743 - PROTOP DNA P -3182 1298 1110 9 688 437 124 0 147 chrUextra 13544013 13544137 -15460519 + STALKER4_LTR LTR Gypsy 287 399 -3 9 688 4988 7 43 0 chrUextra 13544137 13544741 -15459915 + Gypsy4_I LTR Gypsy 896 1525 -4763 9 688 6353 1 0 0 chrUextra 13544843 13545569 -15459087 - DOC LINE Jockey -396 4329 3604 9 688 2840 193 24 9 chrUextra 13545678 13546379 -15458277 - SAR_DM Satellite Satellite -569 903 192 9 688 725 97 0 0 chrUextra 13546283 13546397 -15458259 + ARS406_DM Unknown Unknown 1 114 -239 9 688 5904 17 7 4 chrUextra 13546497 13547225 -15457431 + MICROPIA_I LTR Gypsy 3535 4264 -212 9 688 2162 231 32 16 chrUextra 13547326 13548053 -15456603 + G_DM LINE Jockey 844 1575 -467 9 688 5781 0 0 1 chrUextra 13548153 13548836 -15455820 - LSU-rRNA_Dme rRNA rRNA -3001 899 218 9 688 6319 3 0 1 chrUextra 13548981 13549709 -15454947 - SSU-rRNA_Dme rRNA rRNA -812 1183 457 9 688 6227 4 0 6 chrUextra 13549809 13550537 -15454119 + Invader4_I LTR Gypsy 110 833 -1580 9 688 6241 3 0 0 chrUextra 13550637 13551365 -15453291 - R1_DM LINE R1 -2126 3230 2503 9 688 6144 8 1 3 chrUextra 13551465 13552192 -15452464 - SSU-rRNA_Dme rRNA rRNA -86 1909 1184 9 688 6164 0 7 0 chrUextra 13552293 13553021 -15451635 - LSU-rRNA_Dme rRNA rRNA -2720 1180 448 9 688 21 89 0 0 chrUextra 13553778 13553834 -15450822 + AT_rich Low_complexity Low_complexity 1 56 0 9 688 1246 18 0 12 chrUextra 13553966 13554132 -15450524 - NTS_DM Other Other -39 201 38 9 688 870 9 0 27 chrUextra 13554132 13554244 -15450412 - NTS_DM Other Other -107 133 25 9 688 22 56 0 0 chrUextra 13554270 13554306 -15450350 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 255 125 0 0 chrUextra 13554319 13554359 -15450297 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 246 150 0 0 chrUextra 13554402 13554442 -15450214 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 246 150 0 0 chrUextra 13554494 13554534 -15450122 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 246 150 0 0 chrUextra 13554586 13554626 -15450030 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 22 56 0 0 chrUextra 13554631 13554667 -15449989 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 4197 85 86 14 chrUextra 13554777 13555427 -15449229 + Gypsy12_I LTR Gypsy 4850 5546 0 9 688 371 111 13 77 chrUextra 13555427 13555505 -15449151 + Gypsy12_LTR LTR Gypsy 1 73 -2263 9 688 594 226 16 63 chrUextra 13555616 13555805 -15448851 + Gypsy3_LTR LTR Gypsy 213 392 -6 9 688 831 218 136 93 chrUextra 13555891 13556331 -15448325 + Gypsy3_I LTR Gypsy 27 485 -5692 9 688 6151 6 0 0 chrUextra 13556434 13557161 -15447495 + QUASIMODO_I LTR Gypsy 1989 2715 -3345 9 688 5956 15 0 0 chrUextra 13557261 13557989 -15446667 + PROTOP DNA P 1428 2155 -2325 9 688 276 77 0 0 chrUextra 13558733 13558772 -15445884 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 688 4072 87 19 4 chrUextra 13558917 13559645 -15445011 + DOC3_DM LINE Jockey 3080 3837 -888 9 688 5350 38 15 28 chrUextra 13559745 13560473 -15444183 + BATUMI_I LTR Pao 1189 1907 -6056 9 688 735 11 0 0 chrUextra 13560573 13560660 -15443996 + CIRCE LINE Composite 4894 4980 -1376 9 688 2148 32 3 7 chrUextra 13561017 13561301 -15443355 + CIRCE LINE Composite 4981 5263 -1093 9 688 3412 16 0 2 chrUextra 13561401 13561827 -15442829 - BATUMI_I LTR Pao -236 7727 7303 9 688 2010 43 11 7 chrUextra 13561850 13562129 -15442527 + BATUMI_I LTR Pao 6427 6706 -1257 9 688 270 188 16 0 chrUextra 13562231 13562295 -15442361 + XDMR Unknown Unknown 297 361 0 9 688 3286 166 4 22 chrUextra 13562240 13562957 -15441699 - SAR_DM Satellite Satellite -353 1119 416 9 688 6026 15 0 6 chrUextra 13563057 13563785 -15440871 - FW_DM LINE Jockey -2286 2406 1683 9 688 34 24 0 0 chrUextra 13564008 13564049 -15440607 + AT_rich Low_complexity Low_complexity 1 41 0 9 688 21 95 0 0 chrUextra 13564262 13564325 -15440331 + AT_rich Low_complexity Low_complexity 1 63 0 9 688 1964 0 0 94 chrUextra 13564337 13564613 -15440043 + LSU-rRNA_Dme rRNA rRNA 1 250 -3650 9 688 3766 12 0 49 chrUextra 13564713 13565244 -15439412 + Invader2_I LTR Gypsy 4088 4592 0 9 688 1179 34 0 0 chrUextra 13565244 13565393 -15439263 + Invader2_LTR LTR Gypsy 118 266 0 9 688 240 163 0 20 chrUextra 13565393 13565441 -15439215 - IDEFIX_I LTR Gypsy -2495 3133 3087 9 688 6087 15 0 1 chrUextra 13565541 13566269 -15438387 + R1_DM LINE R1 1607 2333 -3023 9 688 6161 1 0 1 chrUextra 13566369 13567097 -15437559 - ROO_I LTR Pao -5011 3245 2519 9 688 1167 7 0 0 chrUextra 13567201 13567336 -15437320 - 5S_DM RNA RNA 0 135 1 9 688 1176 0 0 0 chrUextra 13567560 13567695 -15436961 - 5S_DM RNA RNA 0 135 1 9 688 2303 0 0 0 chrUextra 13568025 13568291 -15436365 + DM297_LTR LTR Gypsy 149 414 0 9 688 3592 9 0 2 chrUextra 13568291 13568753 -15435903 + DM297_I LTR Gypsy 1 461 -5706 9 688 21 95 0 0 chrUextra 13569072 13569135 -15435521 + AT_rich Low_complexity Low_complexity 1 63 0 9 688 3332 0 0 60 chrUextra 13569147 13569581 -15435075 + LSU-rRNA_Dme rRNA rRNA 1 408 -3492 9 688 779 72 24 8 chrUextra 13570104 13570230 -15434426 - STALKER4_I LTR Gypsy -5645 885 758 9 688 1332 185 24 7 chrUextra 13570509 13570892 -15433764 + SAR_DM Satellite Satellite 341 1094 -378 9 688 1065 182 75 53 chrUextra 13570915 13571234 -15433422 + SAR_DM Satellite Satellite 527 852 -620 9 688 2369 0 0 0 chrUextra 13571337 13571605 -15433051 + ROO_LTR LTR Pao 161 428 0 9 688 3999 4 0 0 chrUextra 13571605 13572065 -15432591 + LINEJ1_DM LINE Jockey 1350 1809 -3211 9 688 311 178 24 36 chrUextra 13572461 13572545 -15432111 - QUASIMODO_LTR LTR Gypsy -359 299 234 9 688 2167 77 12 15 chrUextra 13572547 13572875 -15431781 - QUASIMODO_LTR LTR Gypsy -326 332 6 9 688 4630 27 115 0 chrUextra 13572993 13573721 -15430935 + ROO_I LTR Pao 5740 6551 -1705 9 688 5398 46 2 3 chrUextra 13573821 13574548 -15430108 + BATUMI_I LTR Pao 5778 6744 -1170 9 688 6256 1 1 3 chrUextra 13574649 13575377 -15429279 - SSU-rRNA_Dme rRNA rRNA -433 1562 836 9 688 2988 174 16 17 chrUextra 13575477 13576188 -15428468 - SAR_DM Satellite Satellite -539 933 224 9 688 411 135 0 0 chrUextra 13576126 13576200 -15428456 + ARS406_DM Unknown Unknown 1 74 -279 9 688 6125 12 0 11 chrUextra 13576305 13577033 -15427623 - Gypsy12_I LTR Gypsy -307 5239 4520 9 688 2085 0 0 0 chrUextra 13577133 13577369 -15427287 + ROO_LTR LTR Pao 193 428 0 9 688 4213 2 0 0 chrUextra 13577369 13577861 -15426795 + ROO_I LTR Pao 1 492 -7764 9 688 2939 187 12 11 chrUextra 13577966 13578689 -15425967 + SAR_DM Satellite Satellite 195 918 -554 9 688 4112 67 14 14 chrUextra 13579617 13580178 -15424478 + Gypsy12_I LTR Gypsy 4394 4954 -592 9 688 1197 109 0 0 chrUextra 13580171 13580345 -15424311 + Gypsy12_I LTR Gypsy 5109 5282 -264 9 688 5709 0 4 34 chrUextra 13580445 13581173 -15423483 + LSU-rRNA_Dme rRNA rRNA 33 738 -3162 9 688 6345 3 1 0 chrUextra 13581273 13582001 -15422655 + LINEJ1_DM LINE Jockey 3898 4626 -394 9 688 40 49 0 0 chrUextra 13582604 13582665 -15421991 + AT_rich Low_complexity Low_complexity 1 61 0 9 688 3691 60 4 6 chrUextra 13582929 13583430 -15421226 - R1_DM LINE R1 -4856 500 1 9 688 917 44 0 0 chrUextra 13583463 13583577 -15421079 - R1_DM LINE R1 0 5356 5243 9 688 658 12 0 0 chrUextra 13583574 13583655 -15421001 - R1_DM LINE R1 -290 5066 4986 9 688 340 0 0 0 chrUextra 13583761 13583801 -15420855 + R1_DM LINE R1 5317 5356 0 9 688 5675 1 3 1 chrUextra 13583814 13584484 -15420172 + R1_DM LINE R1 3231 3901 -1455 9 688 2820 196 23 23 chrUextra 13585411 13586138 -15418518 + SAR_DM Satellite Satellite 1 727 -203 9 688 2432 193 28 30 chrUextra 13586240 13586918 -15417738 - HETA LINE telomeric -1950 4131 3455 9 688 2957 0 0 6 chrUextra 13587065 13587415 -15417241 + Copia_I LTR Copia 4246 4593 0 9 688 2297 0 0 0 chrUextra 13587415 13587691 -15416965 + Copia_LTR LTR Copia 1 276 0 9 688 3006 166 33 17 chrUextra 13587893 13588615 -15416041 - SAR_DM Satellite Satellite -493 979 246 9 688 824 25 0 8 chrUextra 13588719 13588841 -15415815 + NTS_DM Other Other 81 201 -39 9 688 870 9 0 27 chrUextra 13588893 13589005 -15415651 + NTS_DM Other Other 25 133 -107 9 688 1234 24 0 6 chrUextra 13589005 13589170 -15415486 + NTS_DM Other Other 38 201 -39 9 688 870 9 0 27 chrUextra 13589222 13589334 -15415322 + NTS_DM Other Other 25 133 -107 9 688 875 9 9 0 chrUextra 13589334 13589446 -15415210 + NTS_DM Other Other 38 150 -90 9 688 3144 172 15 16 chrUextra 13589547 13590273 -15414383 - SAR_DM Satellite Satellite -365 1107 383 9 688 3039 179 11 21 chrUextra 13590373 13591096 -15413560 + SAR_DM Satellite Satellite 404 1119 -353 9 688 22 56 0 0 chrUextra 13591547 13591583 -15413073 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 865 128 5 11 chrUextra 13591694 13591883 -15412773 + S_DM DNA Tc1 1549 1736 0 9 688 6054 15 0 0 chrUextra 13592027 13592754 -15411902 - ROO_I LTR Pao -2262 5994 5268 9 688 1885 201 61 57 chrUextra 13593685 13593917 -15410739 - TAHRE LINE telomeric -2863 7600 7348 9 688 198 0 0 0 chrUextra 13593917 13593939 -15410717 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 9 688 1885 201 61 57 chrUextra 13593939 13594360 -15410296 - TAHRE LINE telomeric -3116 7347 6944 9 688 1803 216 86 46 chrUextra 13594515 13595232 -15409424 - Gypsy12_LTR LTR Gypsy -554 1726 999 9 688 1638 326 7 7 chrUextra 13595335 13596061 -15408595 + MICROPIA_I LTR Gypsy 1905 2630 -1846 9 688 3535 196 0 1 chrUextra 13596990 13597716 -15406940 + ROVER-I_DM LTR Gypsy 3020 3744 -2840 9 688 5479 45 14 1 chrUextra 13597816 13598543 -15406113 - R1_DM LINE R1 -4032 1324 589 9 688 210 37 0 0 chrUextra 13598674 13598701 -15405955 + (TA)n Simple_repeat Simple_repeat 1 27 0 9 688 4497 2 0 2 chrUextra 13599494 13600027 -15404629 - NOMAD_LTR LTR Gypsy 0 518 1 9 688 26 0 0 0 chrUextra 13600075 13600101 -15404555 + AT_rich Low_complexity Low_complexity 1 26 0 9 688 6206 1 3 4 chrUextra 13600297 13601024 -15403632 + SSU-rRNA_Dme rRNA rRNA 1083 1808 -187 9 688 3229 164 15 12 chrUextra 13601127 13601850 -15402806 + SAR_DM Satellite Satellite 282 1006 -466 9 688 3636 33 0 0 chrUextra 13601951 13602400 -15402256 + R1_DM LINE R1 1380 1828 -3528 9 688 2228 46 0 0 chrUextra 13602398 13602678 -15401978 + R1_DM LINE R1 1317 1596 -3760 9 688 951 0 0 9 chrUextra 13602780 13602896 -15401760 + MICROPIA_I LTR Gypsy 4362 4476 0 9 688 3905 6 0 61 chrUextra 13602896 13603403 -15401253 + MICROPIA_LTR LTR Gypsy 1 476 0 9 688 809 39 0 0 chrUextra 13603403 13603505 -15401151 - ACCORD2_I LTR Gypsy -6128 1084 983 9 688 6133 0 1 1 chrUextra 13604432 13605159 -15399497 - ROO_I LTR Pao -3982 4274 3548 9 688 1315 28 45 0 chrUextra 13605262 13605439 -15399217 - PROTOP_B DNA P -793 360 176 9 688 694 276 22 44 chrUextra 13605431 13605844 -15398812 + QUASIMODO_I LTR Gypsy 5527 5930 -130 9 688 1382 80 132 87 chrUextra 13606251 13606539 -15398117 - STALKER4_LTR LTR Gypsy -33 369 69 9 688 406 293 52 16 chrUextra 13606617 13606811 -15397845 - Invader2_I LTR Gypsy -641 3951 3820 9 688 6041 10 0 1 chrUextra 13606913 13607640 -15397016 + FW_DM LINE Jockey 2580 3305 -1387 9 688 6269 0 0 0 chrUextra 13607740 13608467 -15396189 + DOC LINE Jockey 348 1074 -3651 9 688 3142 44 36 17 chrUextra 13608567 13609033 -15395623 + QUASIMODO_I LTR Gypsy 4700 5174 -886 9 688 1653 34 0 0 chrUextra 13609045 13609280 -15395376 + QUASIMODO_I LTR Gypsy 5493 5727 -333 9 688 5948 8 0 0 chrUextra 13609394 13610121 -15394535 + DM297_I LTR Gypsy 1151 1877 -4290 9 688 5976 7 0 0 chrUextra 13610221 13610948 -15393708 - DM297_I LTR Gypsy -4202 1965 1239 9 688 5579 28 10 0 chrUextra 13611048 13611775 -15392881 + PROTOP_A DNA P 125 858 -247 9 688 6329 4 0 0 chrUextra 13612702 13613429 -15391227 + DM1731_I LTR Copia 1247 1973 -2003 9 688 3336 27 4 45 chrUextra 13613668 13614134 -15390522 + CIRCE LINE Composite 4981 5427 -929 9 688 253 29 0 0 chrUextra 13614221 13614256 -15390400 + CIRCE LINE Composite 5428 5462 -894 9 688 6369 0 1 0 chrUextra 13614356 13615083 -15389573 - LSU-rRNA_Dme rRNA rRNA -536 3364 2637 9 688 6145 12 1 0 chrUextra 13615183 13615910 -15388746 - DM1731_I LTR Copia -2814 1162 435 9 688 6056 14 8 0 chrUextra 13616010 13616737 -15387919 - Copia2_I LTR Copia -2577 1585 853 9 688 6374 0 0 0 chrUextra 13616837 13617564 -15387092 + HMSBEAGLE_I LTR Gypsy 1626 2352 -4177 9 688 786 121 0 0 chrUextra 13617664 13617796 -15386860 - ARS406_DM Unknown Unknown -220 133 2 9 688 2851 186 9 9 chrUextra 13617704 13618389 -15386267 + SAR_DM Satellite Satellite 195 879 -593 9 688 5798 26 1 3 chrUextra 13618491 13619214 -15385442 + R1_DM LINE R1 2134 2855 -2501 9 688 444 130 0 0 chrUextra 13619330 13619399 -15385257 + HMSBEAGLE_I LTR Gypsy 1353 1421 -5108 9 688 4615 64 8 6 chrUextra 13619413 13620045 -15384611 + HMSBEAGLE_I LTR Gypsy 1496 2128 -4401 9 688 6253 4 0 0 chrUextra 13620145 13620872 -15383784 + DMRT1B LINE R1 1314 2040 -3143 9 688 6208 0 1 0 chrUextra 13620972 13621699 -15382957 + ROO_I LTR Pao 1617 2344 -5912 9 688 5838 1 1 0 chrUextra 13621799 13622477 -15382179 - Copia_I LTR Copia -3914 679 1 9 688 305 0 20 0 chrUextra 13622477 13622526 -15382130 - Copia_LTR LTR Copia 0 276 227 9 688 6344 0 0 0 chrUextra 13622626 13623353 -15381303 + Invader3_I LTR Gypsy 3632 4358 -530 9 688 6172 1 3 1 chrUextra 13623453 13624180 -15380476 + R1_DM LINE R1 1112 1839 -3517 9 688 2981 87 39 30 chrUextra 13624280 13625007 -15379649 + PROTOP_A DNA P 299 1025 -128 9 688 782 26 0 8 chrUextra 13625107 13625224 -15379432 + NTS_DM Other Other 86 201 -39 9 688 21 57 0 0 chrUextra 13625224 13625259 -15379397 + AT_rich Low_complexity Low_complexity 1 35 0 9 688 832 9 9 27 chrUextra 13625285 13625396 -15379260 + NTS_DM Other Other 25 133 -107 9 688 817 0 0 0 chrUextra 13625396 13625492 -15379164 + NTS_DM Other Other 38 133 -107 9 688 1408 20 20 20 chrUextra 13625492 13625695 -15378961 + NTS_DM Other Other 38 240 0 9 688 1117 14 7 0 chrUextra 13625695 13625834 -15378822 + NTS_DM Other Other 1 140 -100 9 688 2870 171 49 17 chrUextra 13625934 13626654 -15378002 - SAR_DM Satellite Satellite -484 988 246 9 688 261 192 0 0 chrUextra 13626609 13626661 -15377995 + XDMR_DM Unknown Unknown 36 87 -273 9 688 2041 0 8 0 chrUextra 13626761 13627003 -15377653 - R1_DM LINE R1 -5112 244 1 9 688 3953 4 0 0 chrUextra 13627032 13627488 -15377168 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2199 9 688 2611 162 18 9 chrUextra 13627591 13628158 -15376498 + SAR_DM Satellite Satellite 332 903 -569 9 688 943 82 0 0 chrUextra 13628165 13628311 -15376345 - ARS406_DM Unknown Unknown -195 158 13 9 688 897 173 102 15 chrUextra 13628443 13628648 -15376008 + DMLTR5 LTR Gypsy 44 266 0 9 688 351 49 65 16 chrUextra 13628647 13628709 -15375947 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 688 244 128 0 21 chrUextra 13628731 13628779 -15375877 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 688 244 128 0 21 chrUextra 13629009 13629057 -15375599 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 688 2845 192 28 20 chrUextra 13629246 13629969 -15374687 + SAR_DM Satellite Satellite 1 728 -208 9 688 1272 241 48 62 chrUextra 13630072 13630793 -15373863 - SAR_DM Satellite Satellite -291 1181 471 9 689 3857 0 0 2 chrUextra 13632000 13632450 -15372206 + LINEJ1_DM LINE Jockey 4559 5007 -13 9 689 4655 48 8 2 chrUextra 13632550 13633170 -15371486 - TART LINE telomeric -11809 2668 2045 9 689 765 87 0 9 chrUextra 13633161 13633277 -15371379 - TART_B1 LINE telomeric -4317 6337 6223 9 689 942 9 0 0 chrUextra 13633378 13633488 -15371168 - NTS_DM Other Other -130 110 1 9 689 1408 20 20 20 chrUextra 13633488 13633691 -15370965 - NTS_DM Other Other 0 240 38 9 689 817 0 0 0 chrUextra 13633691 13633787 -15370869 - NTS_DM Other Other -107 133 38 9 689 802 9 9 36 chrUextra 13633787 13633899 -15370757 - NTS_DM Other Other -107 133 25 9 689 21 57 0 0 chrUextra 13633925 13633960 -15370696 + AT_rich Low_complexity Low_complexity 1 35 0 9 689 1019 21 0 7 chrUextra 13633960 13634104 -15370552 - NTS_DM Other Other -39 201 59 9 689 5975 17 0 6 chrUextra 13634205 13634931 -15369725 - FW_DM LINE Jockey -2348 2344 1623 9 689 27 0 0 0 chrUextra 13635536 13635563 -15369093 + AT_rich Low_complexity Low_complexity 1 27 0 9 689 1594 0 0 5 chrUextra 13635570 13635758 -15368898 + ROO_LTR LTR Pao 1 187 -241 9 689 418 17 0 0 chrUextra 13635858 13635918 -15368738 + Copia_LTR LTR Copia 217 276 0 9 689 780 175 0 0 chrUextra 13635925 13636085 -15368571 - SAR_DM Satellite Satellite -774 698 539 9 689 934 193 29 8 chrUextra 13636096 13636342 -15368314 - SAR_DM Satellite Satellite -683 789 539 9 689 758 189 30 17 chrUextra 13636353 13636585 -15368071 - SAR_DM Satellite Satellite -683 789 555 9 689 3298 162 15 15 chrUextra 13636685 13637412 -15367244 + SAR_DM Satellite Satellite 293 1019 -453 9 689 5882 21 12 0 chrUextra 13637513 13638239 -15366417 + NINJA_I LTR Pao 2038 2772 -3239 9 689 472 278 71 81 chrUextra 13638358 13638646 -15366010 + SAR_DM Satellite Satellite 429 1009 -463 9 689 522 277 50 50 chrUextra 13638646 13639007 -15365649 - XDMR Unknown Unknown 0 361 1 9 689 472 278 71 81 chrUextra 13639007 13639063 -15365593 + SAR_DM Satellite Satellite 1010 1126 -346 9 689 6218 0 0 0 chrUextra 13639166 13639893 -15364763 + ROO_I LTR Pao 6026 6752 -1504 9 689 3781 39 12 0 chrUextra 13639993 13640479 -15364177 - DMRT1A LINE R1 -1263 3920 3429 9 689 1235 97 24 39 chrUextra 13640514 13640719 -15363937 - CIRCE LINE Composite -2219 4137 3936 9 689 5905 25 10 0 chrUextra 13641647 13642374 -15362282 - R1_DM LINE R1 -1984 3372 2639 9 689 2783 198 18 23 chrUextra 13642474 13643195 -15361461 + SAR_DM Satellite Satellite 1 716 -208 9 689 284 104 21 0 chrUextra 13643152 13643200 -15361456 - ARS406_DM Unknown Unknown -164 189 141 9 689 593 0 0 13 chrUextra 13643301 13643377 -15361279 - DMRT1B LINE R1 -807 4376 4302 9 689 5541 3 26 0 chrUextra 13643373 13644028 -15360628 - DMRT1B LINE R1 -2629 2554 1883 9 689 3163 60 5 7 chrUextra 13644128 13644564 -15360092 - R1_DM LINE R1 -4921 435 1 9 689 913 53 0 0 chrUextra 13644597 13644711 -15359945 - R1_DM LINE R1 0 5356 5243 9 689 1082 7 122 0 chrUextra 13644708 13644855 -15359801 - R1_DM LINE R1 -290 5066 4902 9 689 898 85 8 0 chrUextra 13644955 13645085 -15359571 - R1_DM LINE R1 -5225 131 1 9 689 4505 18 16 11 chrUextra 13645118 13645682 -15358974 - R1_DM LINE R1 0 5356 4790 9 689 5687 19 28 1 chrUextra 13645782 13646509 -15358147 + IVK_DM LINE I 1228 1973 -3429 9 689 3126 167 33 7 chrUextra 13646611 13647315 -15357341 - SAR_DM Satellite Satellite -425 1047 326 9 689 6211 7 3 0 chrUextra 13647436 13648163 -15356493 + Gypsy6_I LTR Gypsy 1249 1977 -5035 9 689 5971 7 1 1 chrUextra 13649090 13649817 -15354839 - R1_DM LINE R1 -4160 1196 470 9 689 2410 196 73 7 chrUextra 13649917 13650640 -15354016 + SAR_DM Satellite Satellite 1 770 -242 9 689 891 10 0 0 chrUextra 13650744 13650848 -15353808 - NTS_DM Other Other -136 104 1 9 689 1741 17 17 17 chrUextra 13650848 13651088 -15353568 - NTS_DM Other Other 0 240 1 9 689 1847 4 17 13 chrUextra 13651088 13651327 -15353329 - NTS_DM Other Other 0 240 1 9 689 977 7 28 21 chrUextra 13651327 13651471 -15353185 - NTS_DM Other Other 0 240 96 9 689 327 71 0 0 chrUextra 13651571 13651613 -15353043 - R1_DM LINE R1 -72 5284 5243 9 689 5387 23 65 0 chrUextra 13651610 13652298 -15352358 - R1_DM LINE R1 -290 5066 4334 9 689 391 57 0 19 chrUextra 13652401 13652455 -15352201 - R1_DM LINE R1 -474 4882 4830 9 689 2821 11 63 0 chrUextra 13652455 13652656 -15352000 + Stalker3_LTR LTR Gypsy 1 201 -171 9 689 207 0 0 0 chrUextra 13652656 13652679 -15351977 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 9 689 2821 11 63 0 chrUextra 13652679 13652827 -15351829 + Stalker3_LTR LTR Gypsy 202 370 -2 9 689 291 49 0 0 chrUextra 13652827 13652868 -15351788 + Stalker2_I LTR Gypsy 1 41 -7361 9 689 290 51 136 0 chrUextra 13653066 13653125 -15351531 + Stalker2_I LTR Gypsy 242 308 -7094 9 689 5741 1 6 0 chrUextra 13654052 13654779 -15349877 - DM412 LTR Gypsy -5042 1855 1125 9 689 2442 217 29 10 chrUextra 13654879 13655600 -15349056 + SAR_DM Satellite Satellite 483 1217 -255 9 689 6217 1 6 0 chrUextra 13655706 13656426 -15348230 + LSU-rRNA_Dme rRNA rRNA 3177 3900 0 9 689 4529 6 0 7 chrUextra 13656588 13657130 -15347526 - LINEJ1_DM LINE Jockey -2 5018 4481 9 689 6142 0 0 3 chrUextra 13657360 13658087 -15346569 + ROO_I LTR Pao 3495 4219 -4037 9 689 390 147 160 15 chrUextra 13658190 13658321 -15346335 - TAHRE LINE telomeric -10308 155 6 9 689 2315 83 10 0 chrUextra 13658308 13658695 -15345961 - HETA LINE telomeric -2 6079 5745 9 689 385 109 86 11 chrUextra 13658688 13658781 -15345875 - TART LINE telomeric -4851 9626 9527 9 689 6080 7 1 3 chrUextra 13659014 13659741 -15344915 + R1_DM LINE R1 3184 3909 -1447 9 689 2824 180 34 23 chrUextra 13659841 13660568 -15344088 + SAR_DM Satellite Satellite 422 1156 -316 9 689 3682 56 38 0 chrUextra 13660839 13661391 -15343265 - PROTOP_A DNA P 0 1105 573 9 689 488 119 36 0 chrUextra 13661578 13661662 -15342994 + NTS_DM Other Other 4 90 -150 9 689 28 48 0 0 chrUextra 13661935 13661977 -15342679 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 1896 34 82 11 chrUextra 13662322 13662591 -15342065 + BATUMI_I LTR Pao 6463 6750 -1213 9 689 3087 24 2 70 chrUextra 13662609 13663049 -15341607 - BATUMI_I LTR Pao -5300 2663 2254 9 689 6067 8 1 0 chrUextra 13663149 13663876 -15340780 + DM176_I LTR Gypsy 3979 4706 -1714 9 689 498 17 0 0 chrUextra 13663976 13664034 -15340622 + STALKER4_LTR LTR Gypsy 292 349 -53 9 689 2188 146 69 22 chrUextra 13664061 13664693 -15339963 + Stalker2_I LTR Gypsy 291 999 -5531 9 689 1898 178 16 7 chrUextra 13664804 13665235 -15339421 + SAR_DM Satellite Satellite 469 903 -569 9 689 706 32 53 0 chrUextra 13665150 13665245 -15339411 - ARS406_DM Unknown Unknown -164 189 90 9 689 1160 196 7 4 chrUextra 13665250 13665527 -15339129 + SAR_DM Satellite Satellite 496 773 -699 9 689 3011 189 10 8 chrUextra 13666457 13667174 -15337482 + SAR_DM Satellite Satellite 212 929 -543 9 689 1088 21 0 20 chrUextra 13667285 13667431 -15337225 + NTS_DM Other Other 20 162 -78 9 689 488 119 36 0 chrUextra 13667541 13667625 -15337031 + NTS_DM Other Other 4 90 -150 9 689 28 48 0 0 chrUextra 13667898 13667940 -15336716 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 3759 177 16 3 chrUextra 13668111 13668838 -15335818 + IDEFIX_I LTR Gypsy 658 1394 -4234 9 689 5316 49 4 11 chrUextra 13668938 13669665 -15334991 + BATUMI_I LTR Pao 2956 3677 -4286 9 689 246 150 0 0 chrUextra 13669796 13669836 -15334820 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 689 4694 7 11 0 chrUextra 13669941 13670492 -15334164 - LSU-rRNA_Dme rRNA rRNA 0 3900 3344 9 689 3118 18 100 0 chrUextra 13670592 13671319 -15333337 + R1_DM LINE R1 1599 2398 -2958 9 689 5119 22 81 0 chrUextra 13671419 13672146 -15332510 - R1_DM LINE R1 -2146 3210 2425 9 689 2287 261 12 12 chrUextra 13672247 13672972 -15331684 + ROVER-I_DM LTR Gypsy 2594 3318 -3266 9 689 944 140 41 54 chrUextra 13673073 13673315 -15331341 + ROVER-LTR_DM LTR Gypsy 129 367 0 9 689 766 191 26 152 chrUextra 13673315 13673742 -15330914 + ROVER-I_DM LTR Gypsy 1 373 -6211 9 689 2398 102 21 17 chrUextra 13673903 13674484 -15330172 + DMSAT6 Satellite Satellite 1 582 -152 9 689 345 234 0 0 chrUextra 13674486 13674623 -15330033 + (TTATG)n Simple_repeat Simple_repeat 2 138 0 9 689 2745 23 63 0 chrUextra 13674732 13674933 -15329723 + Stalker3_LTR LTR Gypsy 1 201 -171 9 689 207 0 0 0 chrUextra 13674933 13674956 -15329700 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 9 689 2745 23 63 0 chrUextra 13674956 13675104 -15329552 + Stalker3_LTR LTR Gypsy 202 370 -2 9 689 291 49 0 0 chrUextra 13675104 13675145 -15329511 + Stalker2_I LTR Gypsy 1 41 -7361 9 689 470 140 75 0 chrUextra 13675343 13675450 -15329206 + Stalker2_I LTR Gypsy 242 356 -7046 9 689 3786 18 66 6 chrUextra 13675554 13676281 -15328375 - FW_DM LINE Jockey -655 4037 3267 9 689 1236 17 22 22 chrUextra 13676381 13676565 -15328091 + NTS_DM Other Other 57 240 0 9 689 1731 21 17 17 chrUextra 13676565 13676805 -15327851 + NTS_DM Other Other 1 240 0 9 689 1756 17 17 17 chrUextra 13676805 13677045 -15327611 + NTS_DM Other Other 1 240 0 9 689 510 16 16 0 chrUextra 13677045 13677108 -15327548 + NTS_DM Other Other 1 64 -176 9 689 591 153 38 15 chrUextra 13677208 13677341 -15327315 + SAR_DM Satellite Satellite 798 933 -539 9 689 890 50 0 0 chrUextra 13677222 13677343 -15327313 - ARS406_DM Unknown Unknown -164 189 69 9 689 5086 2 0 0 chrUextra 13677345 13677935 -15326721 + G2_DM LINE Jockey 1813 2402 -700 9 689 394 100 0 0 chrUextra 13678035 13678095 -15326561 + Gypsy12_I LTR Gypsy 1495 1554 -3992 9 689 2128 113 0 15 chrUextra 13678102 13678426 -15326230 + Gypsy12_I LTR Gypsy 1503 1821 -3725 9 689 2235 88 83 0 chrUextra 13678423 13678762 -15325894 + Gypsy12_I LTR Gypsy 4465 4831 -715 9 689 4711 0 4 0 chrUextra 13678862 13679423 -15325233 - DOC LINE Jockey -3538 1187 625 9 689 1062 89 0 19 chrUextra 13679429 13679589 -15325067 - Gypsy7_I LTR Gypsy -2064 2920 2764 9 689 6202 6 1 0 chrUextra 13681343 13682069 -15322587 + R1_DM LINE R1 1771 2497 -2859 9 689 1073 68 0 0 chrUextra 13682170 13682316 -15322340 + HOBO DNA hAT 801 946 -2070 9 689 3446 92 6 6 chrUextra 13682321 13682857 -15321799 + HOBO DNA hAT 1100 1635 -1381 9 689 6277 4 1 0 chrUextra 13682997 13683724 -15320932 - Gypsy6_I LTR Gypsy -5132 1880 1153 9 689 23 54 0 0 chrUextra 13683824 13683861 -15320795 + AT_rich Low_complexity Low_complexity 1 37 0 9 689 807 19 9 27 chrUextra 13683887 13683998 -15320658 + NTS_DM Other Other 25 133 -107 9 689 817 0 0 0 chrUextra 13683998 13684094 -15320562 + NTS_DM Other Other 38 133 -107 9 689 1408 20 20 20 chrUextra 13684094 13684297 -15320359 + NTS_DM Other Other 38 240 0 9 689 1713 25 17 17 chrUextra 13684297 13684537 -15320119 + NTS_DM Other Other 1 240 0 9 689 6217 7 0 0 chrUextra 13684651 13685378 -15319278 + DOC LINE Jockey 3017 3743 -982 9 689 680 0 0 0 chrUextra 13685478 13685560 -15319096 + R1_DM LINE R1 4985 5066 -290 9 689 934 35 0 0 chrUextra 13685557 13685671 -15318985 + R1_DM LINE R1 5243 5356 0 9 689 2190 65 7 7 chrUextra 13685704 13686013 -15318643 + R1_DM LINE R1 1 309 -5047 9 689 1544 41 0 0 chrUextra 13686010 13686205 -15318451 + R1_DM LINE R1 1503 1697 -3659 9 689 2159 0 0 0 chrUextra 13686305 13686550 -15318106 - TABOR_LTR LTR Gypsy -261 245 1 9 689 4119 2 0 2 chrUextra 13686550 13687032 -15317624 + FW_DM LINE Jockey 857 1337 -3355 9 689 6251 3 3 0 chrUextra 13687132 13687859 -15316797 + DOC LINE Jockey 3366 4094 -631 9 689 276 185 250 42 chrUextra 13688066 13688162 -15316494 + HETRP_DM Satellite Satellite 1519 1634 -238 9 689 787 170 6 19 chrUextra 13688210 13688366 -15316290 + HETRP_DM Satellite Satellite 1516 1669 -203 9 689 276 185 250 42 chrUextra 13688524 13688620 -15316036 + HETRP_DM Satellite Satellite 1519 1634 -238 9 689 374 307 44 31 chrUextra 13688837 13689487 -15315169 + MDG1_I LTR Gypsy 1456 2112 -4501 9 689 5982 8 1 0 chrUextra 13689616 13690340 -15314316 + STALKER4_I LTR Gypsy 5471 6195 -335 9 689 1945 50 42 0 chrUextra 13690441 13690700 -15313956 + R1_DM LINE R1 1348 1617 -3739 9 689 3731 18 0 9 chrUextra 13690712 13691167 -15313489 + R1_DM LINE R1 2001 2451 -2905 9 689 6165 7 0 0 chrUextra 13692094 13692821 -15311835 + DOC LINE Jockey 2745 3471 -1254 9 689 3178 174 8 8 chrUextra 13692933 13693641 -15311015 + SAR_DM Satellite Satellite 369 1076 -396 9 689 4533 29 0 0 chrUextra 13693748 13694307 -15310349 - DMCR1A LINE CR1 -1816 2654 2096 9 689 303 66 0 32 chrUextra 13694408 13694471 -15310185 + DMSAT6 Satellite Satellite 279 339 -131 9 689 1734 21 17 17 chrUextra 13694599 13694839 -15309817 + NTS_DM Other Other 1 240 0 9 689 1764 21 17 13 chrUextra 13694839 13695078 -15309578 + NTS_DM Other Other 1 240 0 9 689 1735 5 13 13 chrUextra 13695078 13695302 -15309354 + NTS_DM Other Other 1 224 -16 9 689 5993 23 0 0 chrUextra 13695402 13696129 -15308527 - R1_DM LINE R1 -1600 3756 3030 9 689 5677 18 56 8 chrUextra 13696229 13696956 -15307700 + FW_DM LINE Jockey 2094 2855 -1837 9 689 5920 6 0 0 chrUextra 13697056 13697783 -15306873 - QUASIMODO_I LTR Gypsy -2239 3821 3095 9 689 31 68 0 0 chrUextra 13698003 13698062 -15306594 + AT_rich Low_complexity Low_complexity 1 59 0 9 689 27 81 0 0 chrUextra 13698123 13698185 -15306471 + AT_rich Low_complexity Low_complexity 1 62 0 9 689 5071 99 0 0 chrUextra 13698712 13699437 -15305219 + HMSBEAGLE_I LTR Gypsy 4664 5388 -1141 9 689 6118 11 0 0 chrUextra 13699537 13700264 -15304392 + DM297_I LTR Gypsy 2657 3383 -2784 9 689 5604 46 0 4 chrUextra 13700364 13701091 -15303565 + IDEFIX_I LTR Gypsy 2227 2950 -2678 9 689 564 117 117 0 chrUextra 13701191 13701294 -15303362 + STALKER4_I LTR Gypsy 5805 5919 -611 9 689 360 0 0 0 chrUextra 13702018 13702059 -15302597 + DM176_I LTR Gypsy 6380 6420 0 9 689 4319 4 0 0 chrUextra 13702059 13702566 -15302090 + DM176_LTR LTR Gypsy 1 507 0 9 689 969 100 0 6 chrUextra 13702570 13702731 -15301925 - ARS406_DM Unknown Unknown -193 160 1 9 689 405 204 0 18 chrUextra 13702635 13702745 -15301911 + SAR_DM Satellite Satellite 192 299 -1173 9 689 4306 36 80 0 chrUextra 13702982 13703572 -15301084 + PROTOP DNA P 1 637 -3843 9 689 2716 166 26 13 chrUextra 13703673 13704288 -15300368 - SAR_DM Satellite Satellite -577 895 273 9 689 755 10 29 10 chrUextra 13704295 13704399 -15300257 + FW_DM LINE Jockey 1 106 -4586 9 689 5699 45 0 0 chrUextra 13704499 13705226 -15299430 - FW_DM LINE Jockey -3821 871 145 9 689 6174 0 0 0 chrUextra 13705326 13706052 -15298604 - BLOOD_I LTR Gypsy -4618 1995 1270 9 689 2861 169 39 29 chrUextra 13706152 13706876 -15297780 - SAR_DM Satellite Satellite -354 1118 388 9 689 6243 6 0 0 chrUextra 13706978 13707704 -15296952 - R1_DM LINE R1 -2653 2703 1978 9 689 5813 25 4 3 chrUextra 13707804 13708530 -15296126 + R1_DM LINE R1 2606 3332 -2024 9 689 415 339 56 16 chrUextra 13708630 13709077 -15295579 - Gypsy10_I LTR Gypsy -3012 2266 1741 9 689 372 156 0 13 chrUextra 13709078 13709152 -15295504 - MDG1_LTR LTR Gypsy -26 416 344 9 689 1340 79 15 10 chrUextra 13709152 13709356 -15295300 - Gypsy10_LTR LTR Gypsy 0 364 160 9 689 26 64 0 0 chrUextra 13709552 13709599 -15295057 + AT_rich Low_complexity Low_complexity 1 47 0 9 689 377 323 14 14 chrUextra 13709960 13710180 -15294476 + Copia2_I LTR Copia 140 359 -3803 9 689 2167 132 16 9 chrUextra 13710286 13711008 -15293648 + DMSAT6 Satellite Satellite 1 726 0 9 689 5068 83 3 3 chrUextra 13711108 13711834 -15292822 - S_DM DNA Tc1 -763 973 248 9 689 6021 22 4 0 chrUextra 13711934 13712660 -15291996 - Copia2_I LTR Copia -1476 2686 1958 9 689 3942 0 0 0 chrUextra 13712760 13713241 -15291415 + ROO_I LTR Pao 7776 8256 0 9 689 2130 4 0 0 chrUextra 13713241 13713486 -15291170 + ROO_LTR LTR Pao 1 245 -183 9 689 3193 104 5 39 chrUextra 13713586 13714156 -15290500 - STALKER4_I LTR Gypsy -5963 567 17 9 689 239 223 223 0 chrUextra 13714209 13714312 -15290344 - STALKER4_LTR LTR Gypsy -29 373 248 9 689 342 0 69 52 chrUextra 13714412 13714470 -15290186 + NTS_DM Other Other 182 240 0 9 689 1301 6 0 18 chrUextra 13714470 13714635 -15290021 + NTS_DM Other Other 1 162 -78 9 689 488 119 36 0 chrUextra 13714745 13714829 -15289827 + NTS_DM Other Other 4 90 -150 9 689 22 56 0 0 chrUextra 13715102 13715138 -15289518 + AT_rich Low_complexity Low_complexity 1 36 0 9 689 3135 174 24 7 chrUextra 13715241 13715959 -15288697 - SAR_DM Satellite Satellite -411 1061 332 9 689 4858 47 32 3 chrUextra 13716064 13716744 -15287912 + DM297_I LTR Gypsy 3652 4351 -1816 9 689 321 25 0 0 chrUextra 13716750 13716790 -15287866 + MDG1_I LTR Gypsy 5401 5440 -1156 9 689 22 35 0 0 chrUextra 13717105 13717134 -15287522 + AT_rich Low_complexity Low_complexity 1 29 0 9 689 37 39 0 0 chrUextra 13717235 13717286 -15287370 + AT_rich Low_complexity Low_complexity 1 51 0 9 689 6229 1 3 3 chrUextra 13717716 13718442 -15286214 + SSU-rRNA_Dme rRNA rRNA 1042 1767 -228 9 689 5997 6 0 11 chrUextra 13719368 13720094 -15284562 - LSU-rRNA_Dme rRNA rRNA -2284 1616 899 9 689 5892 0 21 1 chrUextra 13720194 13720920 -15283736 + ROO_I LTR Pao 133 872 -7384 9 689 5945 0 0 0 chrUextra 13721846 13722572 -15282084 - QUASIMODO_I LTR Gypsy -163 5897 5172 9 689 883 152 0 37 chrUextra 13722672 13722863 -15281793 + IDEFIX_I LTR Gypsy 4976 5159 -469 9 689 869 47 0 0 chrUextra 13722892 13722998 -15281658 - DMTOM1_LTR LTR Gypsy -304 106 1 9 689 611 199 15 0 chrUextra 13722998 13723116 -15281540 - ZAM_I LTR Gypsy -6843 647 528 9 689 1381 319 32 28 chrUextra 13723498 13724178 -15280478 + HMSBEAGLE_I LTR Gypsy 3785 4467 -2062 9 689 3584 16 0 2 chrUextra 13724324 13724748 -15279908 + FW_DM LINE Jockey 4270 4692 0 9 689 1151 252 23 23 chrUextra 13724749 13725050 -15279606 + Gypsy3_I LTR Gypsy 4147 4447 -1730 9 689 488 153 24 0 chrUextra 13725210 13725295 -15279361 - NTS_DM Other Other -150 90 4 9 689 1355 6 0 18 chrUextra 13725405 13725570 -15279086 - NTS_DM Other Other -78 162 1 9 689 1851 4 25 13 chrUextra 13725570 13725807 -15278849 - NTS_DM Other Other 0 240 1 9 689 464 0 58 43 chrUextra 13725807 13725876 -15278780 - NTS_DM Other Other 0 240 171 9 689 4179 60 29 1 chrUextra 13725983 13726702 -15277954 + DM297_I LTR Gypsy 3088 3858 -2309 9 689 5774 0 4 65 chrUextra 13726802 13727528 -15277128 + LSU-rRNA_Dme rRNA rRNA 1469 2150 -1750 9 689 208 200 31 0 chrUextra 13728068 13728133 -15276523 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 689 5809 17 3 32 chrUextra 13728454 13729180 -15275476 - G_DM LINE Jockey -65 4281 3577 9 689 3290 152 25 40 chrUextra 13729280 13730005 -15274651 - SAR_DM Satellite Satellite -504 968 255 9 689 253 26 25 25 chrUextra 13730376 13730416 -15274240 + PROTOP_B DNA P 1 40 -1113 9 689 2233 51 103 0 chrUextra 13730414 13730832 -15273824 + PROTOP_B DNA P 354 749 -404 9 689 6178 1 0 1 chrUextra 13730932 13731658 -15272998 + DM176_I LTR Gypsy 898 1622 -4798 9 689 6562 0 0 1 chrUextra 13731758 13732484 -15272172 + R1_DM LINE R1 1619 2343 -3013 9 689 470 18 0 50 chrUextra 13732587 13732647 -15272009 - NTS_DM Other Other -159 81 25 9 689 21 57 0 0 chrUextra 13732673 13732708 -15271948 + AT_rich Low_complexity Low_complexity 1 35 0 9 689 1304 18 0 6 chrUextra 13732708 13732873 -15271783 - NTS_DM Other Other -39 201 38 9 689 890 18 0 27 chrUextra 13732873 13732985 -15271671 - NTS_DM Other Other -107 133 25 9 689 1304 18 0 6 chrUextra 13733037 13733202 -15271454 - NTS_DM Other Other -39 201 38 9 689 888 28 0 0 chrUextra 13733202 13733310 -15271346 - NTS_DM Other Other -107 133 26 9 689 6442 6 0 1 chrUextra 13735062 13735788 -15268868 - DOC LINE Jockey -1706 3019 2295 9 689 3349 179 10 8 chrUextra 13735889 13736611 -15268045 - SAR_DM Satellite Satellite -526 946 224 9 689 634 148 82 27 chrUextra 13736714 13736860 -15267796 - MDG1_I LTR Gypsy -6442 154 1 9 689 1990 91 74 3 chrUextra 13736860 13737158 -15267498 - MDG1_LTR LTR Gypsy -30 412 94 9 689 372 88 0 0 chrUextra 13737160 13737217 -15267439 + (TTA)n Simple_repeat Simple_repeat 3 59 0 9 689 896 86 56 21 chrUextra 13737245 13737388 -15267268 + DM176_I LTR Gypsy 2360 2507 -3913 9 689 232 67 89 0 chrUextra 13737395 13737440 -15267216 + DM176_I LTR Gypsy 2641 2689 -3731 9 689 28 48 0 0 chrUextra 13737730 13737772 -15266884 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 514 119 36 0 chrUextra 13738045 13738129 -15266527 - NTS_DM Other Other -150 90 4 9 689 5279 2 0 2 chrUextra 13738366 13738945 -15265711 - SSU-rRNA_Dme rRNA rRNA -1417 578 1 9 689 22 56 0 0 chrUextra 13739363 13739399 -15265257 + AT_rich Low_complexity Low_complexity 1 36 0 9 689 6311 1 0 1 chrUextra 13740021 13740744 -15263912 - ROO_I LTR Pao -4608 3648 2927 9 689 3330 0 5 0 chrUextra 13740844 13741213 -15263443 - R1_DM LINE R1 -4985 371 1 9 689 236 36 0 0 chrUextra 13741213 13741241 -15263415 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2605 9 689 3018 0 0 0 chrUextra 13741241 13741570 -15263086 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2325 9 689 6453 0 0 1 chrUextra 13741670 13742396 -15262260 - LSU-rRNA_Dme rRNA rRNA -2757 1143 419 9 689 3945 68 21 24 chrUextra 13742497 13743222 -15261434 - PROTOP DNA P -115 4365 3892 9 689 1601 6 0 0 chrUextra 13743322 13743498 -15261158 - R2_DM LINE R2 -2172 1435 1260 9 689 5011 2 0 0 chrUextra 13743497 13744048 -15260608 - LSU-rRNA_Dme rRNA rRNA -1376 2524 1974 9 689 2617 7 3 0 chrUextra 13744148 13744441 -15260215 + LSU-rRNA_Dme rRNA rRNA 2288 2581 -1319 9 689 3906 7 0 5 chrUextra 13744435 13744874 -15259782 + R2_DM LINE R2 1 437 -3170 9 689 5896 17 4 21 chrUextra 13744974 13745700 -15258956 + IVK_DM LINE I 1341 2054 -3348 9 689 6357 19 0 0 chrUextra 13745800 13746526 -15258130 - R1_DM LINE R1 -2702 2654 1929 9 689 6586 3 0 0 chrUextra 13746626 13747352 -15257304 - MICROPIA_I LTR Gypsy -414 4062 3337 9 689 383 0 0 0 chrUextra 13747452 13747496 -15257160 - LSU-rRNA_Dme rRNA rRNA -3856 44 1 9 689 21 95 0 0 chrUextra 13747508 13747571 -15257085 + AT_rich Low_complexity Low_complexity 1 63 0 9 689 34 24 0 0 chrUextra 13747785 13747826 -15256830 + AT_rich Low_complexity Low_complexity 1 41 0 9 689 22 35 0 0 chrUextra 13748382 13748411 -15256245 + AT_rich Low_complexity Low_complexity 1 29 0 9 689 37 39 0 0 chrUextra 13748512 13748563 -15256093 + AT_rich Low_complexity Low_complexity 1 51 0 9 689 28 48 0 0 chrUextra 13748918 13748960 -15255696 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 565 85 332 19 chrUextra 13749109 13749265 -15255391 + MAX_I LTR Pao 1150 1354 -6560 9 689 3808 72 36 26 chrUextra 13749249 13749830 -15254826 + MAX_I LTR Pao 1217 1803 -6111 9 689 4816 71 43 14 chrUextra 13749930 13750656 -15254000 + TART LINE telomeric 2494 3240 -11237 9 689 1027 37 167 23 chrUextra 13750756 13751055 -15253601 + PROTOP_B DNA P 353 694 -459 9 689 21 0 0 0 chrUextra 13751230 13751251 -15253405 + AT_rich Low_complexity Low_complexity 1 21 0 9 689 3094 196 15 22 chrUextra 13751583 13752307 -15252349 + SAR_DM Satellite Satellite 1 718 -203 9 689 765 46 0 115 chrUextra 13752758 13752880 -15251776 + Baggins1 LINE LOA 5346 5453 0 9 689 6029 26 8 3 chrUextra 13753234 13753960 -15250696 + MDG1_I LTR Gypsy 1668 2397 -4199 9 689 213 39 0 0 chrUextra 13754712 13754738 -15249918 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 689 505 0 138 0 chrUextra 13754889 13755034 -15249622 + (TA)n Simple_repeat Simple_repeat 2 166 0 9 689 2788 39 0 0 chrUextra 13755034 13755370 -15249286 - DM1731_LTR LTR Copia 0 336 1 9 689 2020 4 12 21 chrUextra 13755370 13755612 -15249044 - DM1731_I LTR Copia 0 3976 3737 9 689 6473 0 0 0 chrUextra 13755712 13756438 -15248218 + DM176_I LTR Gypsy 3437 4162 -2258 9 689 4026 180 12 0 chrUextra 13756538 13757264 -15247392 + HETA LINE telomeric 1267 2001 -4080 9 689 3218 178 21 16 chrUextra 13757364 13758090 -15246566 + SAR_DM Satellite Satellite 278 1006 -466 9 689 948 186 28 17 chrUextra 13758195 13758661 -15245995 + SAR_DM Satellite Satellite 1 470 -680 9 689 993 182 25 12 chrUextra 13758672 13758916 -15245740 + SAR_DM Satellite Satellite 539 785 -687 9 689 6498 0 3 0 chrUextra 13759016 13759742 -15244914 - Copia_I LTR Copia -3772 821 94 9 689 6532 6 0 0 chrUextra 13759842 13760568 -15244088 - DMRT1B LINE R1 -3090 2093 1368 9 689 3160 179 13 10 chrUextra 13760669 13761379 -15243277 - SAR_DM Satellite Satellite -602 870 159 9 689 822 120 7 7 chrUextra 13761251 13761394 -15243262 + ARS406_DM Unknown Unknown 1 143 -210 9 689 3458 40 92 0 chrUextra 13761494 13762177 -15242479 + DOC3_DM LINE Jockey 3751 4496 -244 9 689 357 0 0 0 chrUextra 13762174 13762220 -15242436 + DOC3_DM LINE Jockey 4630 4675 -65 9 86 6547 0 1 0 chrUextra 13762320 13763046 -15241610 - DM412 LTR Gypsy -1822 5075 4349 9 690 3504 53 16 150 chrUextra 13763972 13764698 -15239958 + BATUMI_I LTR Pao 141 769 -7194 9 690 6390 16 0 0 chrUextra 13764798 13765524 -15239132 + BATUMI_I LTR Pao 4691 5416 -2547 9 690 2414 102 8 94 chrUextra 13765647 13766350 -15238306 + DMSAT6 Satellite Satellite 1 642 0 9 690 1013 0 0 0 chrUextra 13766452 13766562 -15238094 + LSU-rRNA_Dme rRNA rRNA 3791 3900 0 9 690 22 56 0 0 chrUextra 13766634 13766670 -15237986 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 262 150 0 0 chrUextra 13766675 13766715 -15237941 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 262 150 0 0 chrUextra 13766767 13766807 -15237849 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 262 150 0 0 chrUextra 13766859 13766899 -15237757 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 269 125 0 0 chrUextra 13766942 13766982 -15237674 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 22 56 0 0 chrUextra 13766995 13767031 -15237625 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 907 9 0 27 chrUextra 13767057 13767169 -15237487 + NTS_DM Other Other 25 133 -107 9 690 3370 5 3 0 chrUextra 13767276 13767651 -15237005 - SSU-rRNA_Dme rRNA rRNA -1619 376 1 9 690 32 0 0 0 chrUextra 13767783 13767815 -15236841 + AT_rich Low_complexity Low_complexity 1 32 0 9 690 34 24 0 0 chrUextra 13768176 13768217 -15236439 + AT_rich Low_complexity Low_complexity 1 41 0 9 690 1603 5 0 16 chrUextra 13768928 13769118 -15235538 + DIVER_I LTR Pao 5457 5643 0 9 690 2009 5 0 0 chrUextra 13769118 13769342 -15235314 + DIVER_LTR LTR Pao 1 224 0 9 690 2995 3 0 0 chrUextra 13769754 13770082 -15234574 + DIVER_I LTR Pao 5316 5643 0 9 690 2009 5 0 0 chrUextra 13770082 13770306 -15234350 + DIVER_LTR LTR Pao 1 224 0 9 690 1386 0 0 0 chrUextra 13770326 13770480 -15234176 + (TATAA)n Simple_repeat Simple_repeat 2 155 0 9 690 262 150 0 0 chrUextra 13770586 13770626 -15234030 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 690 262 150 0 0 chrUextra 13770678 13770718 -15233938 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 690 230 108 27 0 chrUextra 13770774 13770811 -15233845 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2581 9 690 22 56 0 0 chrUextra 13770816 13770852 -15233804 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 3450 3 3 0 chrUextra 13770924 13771306 -15233350 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 9 690 1292 275 44 47 chrUextra 13771407 13772132 -15232524 + SAR_DM Satellite Satellite 272 994 -478 9 690 6400 0 0 3 chrUextra 13772232 13772955 -15231701 - LSU-rRNA_Dme rRNA rRNA -2748 1152 432 9 690 2608 3 3 0 chrUextra 13773058 13773360 -15231296 + FW_DM LINE Jockey 4390 4692 0 9 690 5717 10 0 33 chrUextra 13773884 13774610 -15230046 + Invader2_I LTR Gypsy 1419 2120 -2472 9 690 5481 62 18 3 chrUextra 13774711 13775436 -15229220 + QUASIMODO_I LTR Gypsy 85 820 -5240 9 690 5998 13 0 6 chrUextra 13775536 13776219 -15228437 + BATUMI_I LTR Pao 5742 6420 -1543 9 690 3351 176 26 8 chrUextra 13776362 13777088 -15227568 + SAR_DM Satellite Satellite 333 1071 -401 9 690 6639 4 0 0 chrUextra 13777188 13777914 -15226742 + DOC LINE Jockey 2396 3121 -1604 9 690 3041 174 15 20 chrUextra 13778015 13778667 -15225989 - SAR_DM Satellite Satellite -633 839 191 9 690 279 0 0 0 chrUextra 13779535 13779566 -15225090 + (GAGAA)n Simple_repeat Simple_repeat 2 32 0 9 690 3246 191 21 23 chrUextra 13779666 13780388 -15224268 - SAR_DM Satellite Satellite -611 720 1 9 690 3465 176 11 7 chrUextra 13780494 13781205 -15223451 - SAR_DM Satellite Satellite -579 893 180 9 690 769 101 8 0 chrUextra 13781099 13781218 -15223438 + ARS406_DM Unknown Unknown 1 120 -233 9 690 32 0 0 0 chrUextra 13781346 13781378 -15223278 + AT_rich Low_complexity Low_complexity 1 32 0 9 690 4968 2 0 2 chrUextra 13781510 13782044 -15222612 + SSU-rRNA_Dme rRNA rRNA 1 533 -1462 9 690 6725 1 1 0 chrUextra 13782144 13782870 -15221786 + BS2 LINE Jockey 3950 4676 -45 9 690 2655 84 24 21 chrUextra 13782989 13783696 -15220960 + DMSAT6 Satellite Satellite 1 709 0 9 690 32 0 0 0 chrUextra 13783933 13783965 -15220691 + AT_rich Low_complexity Low_complexity 1 32 0 9 690 28 48 0 0 chrUextra 13784293 13784335 -15220321 + AT_rich Low_complexity Low_complexity 1 42 0 9 690 2048 220 64 62 chrUextra 13784622 13785344 -15219312 - Gypsy12_LTR LTR Gypsy -868 1468 746 9 690 459 188 0 0 chrUextra 13785448 13785565 -15219091 + (CTATT)n Simple_repeat Simple_repeat 3 119 0 9 690 4433 21 43 1 chrUextra 13786277 13787000 -15217656 - R1_DM LINE R1 -897 4459 3707 9 690 3417 181 8 8 chrUextra 13787100 13787820 -15216836 - SAR_DM Satellite Satellite -573 899 180 9 690 6715 1 0 1 chrUextra 13787926 13788652 -15216004 - FW_DM LINE Jockey -648 4044 3320 9 690 6019 30 57 0 chrUextra 13788752 13789478 -15215178 - R1_DM LINE R1 -1549 3807 3041 9 690 1415 28 0 6 chrUextra 13789585 13789766 -15214890 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 9 690 1587 67 0 3 chrUextra 13789778 13790105 -15214551 + (GGAGAA)n Simple_repeat Simple_repeat 1 326 0 9 690 315 0 0 167 chrUextra 13790126 13790300 -15214356 + (CGATG)n Simple_repeat Simple_repeat 1 145 0 9 690 1587 4 0 7 chrUextra 13790404 13790676 -15213980 + (GGAGAA)n Simple_repeat Simple_repeat 1 270 0 9 690 435 196 0 0 chrUextra 13790678 13790851 -15213805 + GA-rich Low_complexity Low_complexity 3 175 0 9 690 1439 32 5 0 chrUextra 13790910 13791127 -15213529 + (GGAGAA)n Simple_repeat Simple_repeat 1 217 0 9 690 3323 169 27 18 chrUextra 13791246 13791952 -15212704 + SAR_DM Satellite Satellite 326 1037 -435 9 690 6163 33 0 7 chrUextra 13792056 13792782 -15211874 + MAX_I LTR Pao 2115 2835 -5079 9 690 645 0 0 0 chrUextra 13792882 13792952 -15211704 - LSU-rRNA_Dme rRNA rRNA -3830 70 1 9 690 21 95 0 0 chrUextra 13792964 13793027 -15211629 + AT_rich Low_complexity Low_complexity 1 63 0 9 690 34 24 0 0 chrUextra 13793241 13793282 -15211374 + AT_rich Low_complexity Low_complexity 1 41 0 9 690 2946 0 144 0 chrUextra 13793709 13794057 -15210599 + LSU-rRNA_Dme rRNA rRNA 2235 2632 -1268 9 690 3398 8 5 0 chrUextra 13794057 13794432 -15210224 + R1_DM LINE R1 1 377 -4979 9 690 3233 0 0 65 chrUextra 13794534 13794931 -15209725 - LSU-rRNA_Dme rRNA rRNA -3529 371 1 9 690 21 95 0 0 chrUextra 13794943 13795006 -15209650 + AT_rich Low_complexity Low_complexity 1 63 0 9 690 4071 2 0 53 chrUextra 13795360 13795848 -15208808 - LSU-rRNA_Dme rRNA rRNA -3438 462 1 9 690 21 95 0 0 chrUextra 13795860 13795923 -15208733 + AT_rich Low_complexity Low_complexity 1 63 0 9 690 3159 189 7 19 chrUextra 13796186 13796885 -15207771 + SAR_DM Satellite Satellite 421 1111 -361 9 690 376 196 0 32 chrUextra 13796817 13796912 -15207744 - XDMR_DM Unknown Unknown -9 351 260 9 690 1179 0 0 0 chrUextra 13797012 13797143 -15207513 + (CACAA)n Simple_repeat Simple_repeat 1 131 0 9 690 5371 5 0 0 chrUextra 13797143 13797738 -15206918 - DMRT1B LINE R1 -140 5043 4449 9 690 2668 175 7 10 chrUextra 13797840 13797894 -15206762 - SAR_DM Satellite Satellite -416 721 654 9 690 1103 89 0 0 chrUextra 13797894 13798052 -15206604 + ARS406_DM Unknown Unknown 1 158 -195 9 690 2668 175 7 10 chrUextra 13798052 13798564 -15206092 - SAR_DM Satellite Satellite -416 653 1 9 690 516 241 0 0 chrUextra 13798728 13798902 -15205754 + (TTAA)n Simple_repeat Simple_repeat 2 175 0 9 690 279 125 234 0 chrUextra 13798878 13799134 -15205522 + (CTAAA)n Simple_repeat Simple_repeat 1 316 0 9 690 4608 20 37 0 chrUextra 13799490 13800027 -15204629 - PROTOP_A DNA P -548 557 1 9 690 6407 16 1 1 chrUextra 13800316 13801042 -15203614 - R1_DM LINE R1 -2964 2392 1667 9 690 2242 68 0 4 chrUextra 13801142 13801420 -15203236 + Gypsy12_I LTR Gypsy 5270 5546 0 9 690 2031 185 13 47 chrUextra 13801419 13801867 -15202789 + Gypsy12_LTR LTR Gypsy 1 433 -1903 9 690 3481 173 14 11 chrUextra 13801968 13802694 -15201962 - SAR_DM Satellite Satellite -515 957 230 9 690 982 18 0 0 chrUextra 13802794 13802903 -15201753 + 5S_DM RNA RNA 27 135 0 9 690 1226 15 0 0 chrUextra 13803127 13803262 -15201394 + 5S_DM RNA RNA 1 135 0 9 690 241 0 0 0 chrUextra 13803492 13803520 -15201136 + 5S_DM RNA RNA 1 28 -107 9 690 3081 200 17 23 chrUextra 13803620 13804346 -15200310 + SAR_DM Satellite Satellite 1 721 -225 9 690 6367 7 12 0 chrUextra 13804446 13805172 -15199484 - STALKER4_I LTR Gypsy -2835 3695 2961 9 690 6562 3 0 0 chrUextra 13805272 13805998 -15198658 + R1_DM LINE R1 2400 3125 -2231 9 690 3463 171 13 10 chrUextra 13806098 13806807 -15197849 - SAR_DM Satellite Satellite -436 1036 326 9 690 6447 7 1 3 chrUextra 13806924 13807650 -15197006 - R1_DM LINE R1 -1370 3986 3262 9 690 6682 6 0 1 chrUextra 13807750 13808476 -15196180 - LSU-rRNA_Dme rRNA rRNA -585 3315 2591 9 690 1519 7 0 7 chrUextra 13809021 13809302 -15195354 + (CAAGA)n Simple_repeat Simple_repeat 1 279 0 9 690 6499 14 0 0 chrUextra 13809402 13810128 -15194528 + STALKER4_I LTR Gypsy 1692 2417 -4113 9 690 6734 3 1 0 chrUextra 13810228 13810954 -15193702 - LSU-rRNA_Dme rRNA rRNA -1221 2679 1953 9 690 3852 200 1 0 chrUextra 13811054 13811780 -15192876 - ROVER-I_DM LTR Gypsy -2636 3948 3222 9 690 268 196 0 19 chrUextra 13811943 13811995 -15192661 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 268 196 0 19 chrUextra 13812035 13812087 -15192569 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 278 176 0 19 chrUextra 13812118 13812170 -15192486 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 22 56 0 0 chrUextra 13812183 13812219 -15192437 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 936 9 0 27 chrUextra 13812245 13812357 -15192299 + NTS_DM Other Other 25 133 -107 9 690 1350 18 0 6 chrUextra 13812357 13812522 -15192134 + NTS_DM Other Other 38 201 -39 9 690 199 133 22 22 chrUextra 13812714 13812760 -15191896 + CT-rich Low_complexity Low_complexity 4 49 0 9 690 4719 26 0 0 chrUextra 13813532 13814064 -15190592 - CIRCE LINE Composite -397 5959 5428 9 690 403 136 140 97 chrUextra 13814144 13814258 -15190398 - CIRCE LINE Composite -929 5427 5309 9 690 6197 32 1 0 chrUextra 13814358 13815084 -15189572 + MDG1_I LTR Gypsy 3218 3944 -2652 9 690 4015 5 0 0 chrUextra 13815184 13815619 -15189037 - DOC LINE Jockey -4260 465 31 9 690 1620 12 0 0 chrUextra 13815661 13815910 -15188746 + (TAAA)n Simple_repeat Simple_repeat 1 249 0 9 690 837 79 18 0 chrUextra 13816053 13816167 -15188489 - DMCR1A LINE CR1 -2 4468 4353 9 690 4460 57 18 5 chrUextra 13816169 13816736 -15187920 - DMCR1A LINE CR1 -236 4234 3661 9 690 547 236 0 16 chrUextra 13816837 13816966 -15187690 - ROVER-I_DM LTR Gypsy -3923 2661 2535 9 690 2413 242 15 15 chrUextra 13816955 13817562 -15187094 - ROVER-I_DM LTR Gypsy -4201 2383 1777 9 690 1587 4 0 4 chrUextra 13817670 13817922 -15186734 + (TATAA)n Simple_repeat Simple_repeat 1 250 0 9 690 3296 11 0 0 chrUextra 13817922 13818283 -15186373 + BEL_LTR LTR Pao 1 361 0 9 690 910 0 9 9 chrUextra 13818283 13818388 -15186268 + BEL_I LTR Pao 1 105 -5299 9 690 6230 33 0 0 chrUextra 13818488 13819214 -15185442 - R1_DM LINE R1 -2358 2998 2273 9 690 6356 0 16 0 chrUextra 13819314 13820040 -15184616 + ROO_I LTR Pao 123 860 -7396 9 690 3296 170 16 24 chrUextra 13820143 13820854 -15183802 - SAR_DM Satellite Satellite -577 895 191 9 690 549 202 0 0 chrUextra 13820757 13820866 -15183790 + ARS406_DM Unknown Unknown 1 109 -244 9 690 266 128 0 21 chrUextra 13821067 13821115 -15183541 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 690 376 49 65 16 chrUextra 13821137 13821199 -15183457 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 690 984 173 102 15 chrUextra 13821198 13821403 -15183253 - DMLTR5 LTR Gypsy 0 266 44 9 690 6231 26 0 7 chrUextra 13821792 13822518 -15182138 - ROO_I LTR Pao -318 7938 7218 9 690 6676 7 1 0 chrUextra 13822618 13823344 -15181312 - Copia2_I LTR Copia -1861 2301 1575 9 690 3433 180 15 10 chrUextra 13823444 13824168 -15180488 + SAR_DM Satellite Satellite 267 994 -478 9 690 240 172 46 15 chrUextra 13824437 13824502 -15180154 + HMSBEAGLE_I LTR Gypsy 155 221 -6308 9 690 5603 17 24 1 chrUextra 13825096 13825757 -15178899 + R1_DM LINE R1 3411 4086 -1270 9 690 563 30 0 0 chrUextra 13825755 13825821 -15178835 + R1_DM LINE R1 4559 4624 -732 9 690 6207 0 0 36 chrUextra 13825922 13826648 -15178008 - LSU-rRNA_Dme rRNA rRNA -3090 810 111 9 690 6464 6 1 0 chrUextra 13826748 13827474 -15177182 + DM176_I LTR Gypsy 4468 5194 -1226 9 690 2715 119 38 11 chrUextra 13827574 13828298 -15176358 + DMSAT6 Satellite Satellite 1 743 -37 9 690 6566 6 0 1 chrUextra 13828400 13829126 -15175530 + DMRT1B LINE R1 1804 2528 -2655 9 690 430 0 0 57 chrUextra 13829229 13829282 -15175374 - NTS_DM Other Other -166 74 25 9 690 22 56 0 0 chrUextra 13829308 13829344 -15175312 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 248 176 0 38 chrUextra 13829357 13829410 -15175246 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 268 196 0 19 chrUextra 13829441 13829493 -15175163 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 268 196 0 19 chrUextra 13829524 13829576 -15175080 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 268 196 0 19 chrUextra 13829616 13829668 -15174988 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 1696 6 0 0 chrUextra 13829769 13829952 -15174704 - LSU-rRNA_Dme rRNA rRNA 0 3900 3718 9 690 4363 78 19 60 chrUextra 13830052 13830730 -15173926 + Gypsy8_I LTR Gypsy 1079 1728 -2619 9 690 268 161 16 31 chrUextra 13830714 13830778 -15173878 - DMSAT6 Satellite Satellite -138 332 270 9 690 6326 21 1 1 chrUextra 13830878 13831604 -15173052 + R1_DM LINE R1 3708 4433 -923 9 690 6472 15 0 0 chrUextra 13831704 13832430 -15172226 - DMRT1B LINE R1 -1618 3565 2840 9 690 6747 0 0 0 chrUextra 13832530 13833255 -15171401 + DMRT1B LINE R1 3448 4172 -1011 9 690 1909 38 0 36 chrUextra 13833356 13833604 -15171052 - NINJA_LTR LTR Pao -78 239 1 9 690 3976 40 0 2 chrUextra 13833604 13834080 -15170576 - NINJA_I LTR Pao 0 6011 5537 9 690 6145 42 1 1 chrUextra 13834180 13834905 -15169751 + R1_DM LINE R1 1089 1813 -3543 9 690 1828 310 10 10 chrUextra 13835009 13835728 -15168928 - ROVER-I_DM LTR Gypsy -4907 1677 959 9 690 6469 4 21 0 chrUextra 13835832 13836555 -15168101 - FW_DM LINE Jockey -2863 1829 1092 9 690 842 10 0 0 chrUextra 13836667 13836763 -15167893 + NTS_DM Other Other 38 133 -107 9 690 1494 25 20 20 chrUextra 13836763 13836966 -15167690 + NTS_DM Other Other 38 240 0 9 690 1858 21 17 17 chrUextra 13836966 13837206 -15167450 + NTS_DM Other Other 1 240 0 9 690 1494 17 0 0 chrUextra 13837206 13837380 -15167276 + NTS_DM Other Other 1 174 -66 9 690 2090 219 97 36 chrUextra 13837480 13838205 -15166451 + Gypsy12_LTR LTR Gypsy 1125 1893 -443 9 690 6398 22 3 0 chrUextra 13838305 13839030 -15165626 - R1_DM LINE R1 -3011 2345 1619 9 690 689 317 20 13 chrUextra 13839504 13839847 -15164809 - GTWIN_I LTR Gypsy -2883 3538 3119 9 690 371 24 0 0 chrUextra 13839956 13839998 -15164658 - MAX_LTR LTR Pao -279 42 1 9 690 2881 40 0 0 chrUextra 13840001 13840349 -15164307 - MAX_I LTR Pao -1 7913 7566 9 690 2996 35 0 0 chrUextra 13840335 13840680 -15163976 - MAX_I LTR Pao -2848 5066 4722 9 690 3088 195 18 27 chrUextra 13840780 13841505 -15163151 + SAR_DM Satellite Satellite 1 718 -203 9 690 4110 18 75 2 chrUextra 13841605 13842221 -15162435 - R1_DM LINE R1 -1436 3920 3260 9 690 970 18 0 0 chrUextra 13842221 13842330 -15162326 + BLOOD_LTR LTR Gypsy 1 109 -290 9 690 692 20 0 0 chrUextra 13842430 13842529 -15162127 + FW_DM LINE Jockey 4591 4689 -3 9 690 3358 36 147 5 chrUextra 13842530 13843155 -15161501 - R1_DM LINE R1 -3966 1390 677 9 690 5651 23 0 7 chrUextra 13843280 13843980 -15160676 - Invader2_I LTR Gypsy 0 4592 3898 9 690 419 41 0 0 chrUextra 13844080 13844129 -15160527 - R1_DM LINE R1 -65 5291 5243 9 690 6038 21 1 0 chrUextra 13844126 13844805 -15159851 - R1_DM LINE R1 -290 5066 4387 9 690 574 0 0 0 chrUextra 13844905 13844972 -15159684 + R2_DM LINE R2 3541 3607 0 9 690 432 41 0 0 chrUextra 13844970 13845019 -15159637 + LSU-rRNA_Dme rRNA rRNA 2578 2626 -1274 9 690 3442 5 0 0 chrUextra 13845016 13845384 -15159272 + R2_DM LINE R2 1921 2288 -1319 9 690 277 176 0 19 chrUextra 13845430 13845482 -15159174 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 571 29 0 41 chrUextra 13845557 13845630 -15159026 + NTS_DM Other Other 25 94 -146 9 690 2045 0 0 5 chrUextra 13845730 13845951 -15158705 + ROO_LTR LTR Pao 209 428 0 9 690 4619 0 0 0 chrUextra 13845951 13846455 -15158201 + ROO_I LTR Pao 1 504 -7752 9 690 5220 64 99 7 chrUextra 13846556 13847280 -15157376 + BATUMI_I LTR Pao 1080 1870 -6093 9 690 6470 12 3 1 chrUextra 13847380 13848105 -15156551 + STALKER4_I LTR Gypsy 3885 4610 -1920 9 690 6256 26 0 0 chrUextra 13848205 13848930 -15155726 + TAHRE LINE telomeric 4359 5083 -5380 9 690 251 31 31 0 chrUextra 13849855 13849887 -15154769 - NTS_DM Other Other -207 33 1 9 690 1880 17 17 17 chrUextra 13849887 13850127 -15154529 - NTS_DM Other Other 0 240 1 9 690 1553 10 20 20 chrUextra 13850127 13850330 -15154326 - NTS_DM Other Other 0 240 38 9 690 945 0 0 27 chrUextra 13850330 13850442 -15154214 - NTS_DM Other Other -107 133 25 9 690 21 57 0 0 chrUextra 13850468 13850503 -15154153 + AT_rich Low_complexity Low_complexity 1 35 0 9 690 503 40 0 13 chrUextra 13850503 13850580 -15154076 - NTS_DM Other Other -39 201 126 9 690 6200 26 7 4 chrUextra 13850680 13851405 -15153251 - CIRCE LINE Composite -2707 3649 2923 9 690 6561 11 0 0 chrUextra 13851505 13852230 -15152426 + R1_DM LINE R1 1584 2308 -3048 9 690 6305 17 0 0 chrUextra 13852333 13853055 -15151601 + ROO_I LTR Pao 4754 5475 -2781 9 690 5084 36 48 44 chrUextra 13853155 13853879 -15150777 - PROTOP_A DNA P -39 1066 340 9 690 6452 17 8 0 chrUextra 13853980 13854705 -15149951 - Copia2_I LTR Copia -2096 2066 1336 9 690 6446 6 1 1 chrUextra 13855630 13856355 -15148301 - R1_DM LINE R1 -4034 1322 598 9 690 4794 133 6 0 chrUextra 13856471 13857180 -15147476 - HMSBEAGLE_I LTR Gypsy -4075 2454 1742 9 690 6709 7 0 0 chrUextra 13857280 13858005 -15146651 - Gypsy4_I LTR Gypsy -162 6126 5402 9 690 6574 12 1 0 chrUextra 13858105 13858830 -15145826 + Invader6_I LTR Gypsy 825 1550 -2549 9 690 2535 115 22 14 chrUextra 13858930 13859637 -15145019 - DMSAT6 Satellite Satellite -75 712 1 9 690 1674 0 0 0 chrUextra 13859755 13859936 -15144720 + ACCORD_LTR LTR Gypsy 378 558 0 9 690 2529 40 5 7 chrUextra 13859936 13860480 -15144176 - R1_DM LINE R1 -2227 3129 2554 9 690 6332 1 6 3 chrUextra 13860580 13861305 -15143351 + STALKER4_I LTR Gypsy 1135 1861 -4669 9 690 352 143 0 31 chrUextra 13862230 13862295 -15142361 - DMLTR5 LTR Gypsy -160 106 44 9 690 374 261 114 96 chrUextra 13862505 13862785 -15141871 + Invader1_LTR LTR Gypsy 84 368 -55 9 690 5743 23 1 0 chrUextra 13863055 13863707 -15140949 - R1_DM LINE R1 -298 5058 4406 9 690 458 19 0 0 chrUextra 13863726 13863779 -15140877 - R1_DM LINE R1 -1074 4282 4230 9 690 5954 6 2 10 chrUextra 13863889 13864605 -15140051 + DM412 LTR Gypsy 1 670 -6227 9 690 6308 29 0 0 chrUextra 13864705 13865430 -15139226 - R1_DM LINE R1 -2071 3285 2561 9 690 39 50 0 0 chrUextra 13866023 13866083 -15138573 + AT_rich Low_complexity Low_complexity 1 60 0 9 690 6247 32 1 1 chrUextra 13866355 13867080 -15137576 + R1_DM LINE R1 4214 4938 -418 9 690 4053 24 2 0 chrUextra 13867181 13867645 -15137011 - FW_DM LINE Jockey -988 3704 3240 9 690 2368 11 0 0 chrUextra 13867645 13867905 -15136751 + STALKER4_LTR LTR Gypsy 1 260 -142 9 690 3511 86 13 29 chrUextra 13868008 13868534 -15136122 - Gypsy12_I LTR Gypsy -5028 518 1 9 690 322 137 0 0 chrUextra 13868534 13868585 -15136071 - Gypsy12_LTR LTR Gypsy 0 2336 2286 9 690 315 186 34 34 chrUextra 13868614 13868703 -15135953 - Gypsy12_LTR LTR Gypsy -553 1727 1639 9 690 6103 23 0 6 chrUextra 13868830 13869525 -15135131 + Gypsy12_I LTR Gypsy 1495 2185 -3361 9 690 3082 175 23 29 chrUextra 13869655 13870380 -15134276 - SAR_DM Satellite Satellite -308 1164 444 9 690 6302 28 4 0 chrUextra 13870480 13871205 -15133451 - R1_DM LINE R1 -2098 3258 2531 9 690 4934 98 6 4 chrUextra 13871305 13872030 -15132626 - S_DM DNA Tc1 -1009 727 2 9 690 6590 3 0 0 chrUextra 13872134 13872855 -15131801 + LSU-rRNA_Dme rRNA rRNA 539 1259 -2641 9 690 3391 177 18 8 chrUextra 13872955 13873680 -15130976 - SAR_DM Satellite Satellite -400 1072 341 9 690 6402 28 0 0 chrUextra 13874605 13875330 -15129326 - DIVER_I LTR Pao -3734 1909 1185 9 690 5994 46 11 1 chrUextra 13875430 13876155 -15128501 + R1_DM LINE R1 802 1533 -3823 9 690 6809 1 0 0 chrUextra 13876255 13876980 -15127676 + R2_DM LINE R2 1088 1812 -1795 9 690 4576 98 4 44 chrUextra 13877080 13877786 -15126870 - Gypsy12_I LTR Gypsy -4272 1274 597 9 690 363 347 31 43 chrUextra 13877905 13878302 -15126354 + Gypsy6_I LTR Gypsy 1344 1784 -5228 9 690 6456 1 1 0 chrUextra 13878745 13879455 -15125201 + QUASIMODO_I LTR Gypsy 368 1078 -4982 9 690 3400 178 23 8 chrUextra 13880380 13881105 -15123551 - SAR_DM Satellite Satellite -459 1013 278 9 690 6482 1 1 0 chrUextra 13881205 13881900 -15122756 + R2_DM LINE R2 2910 3605 -2 9 690 255 59 29 0 chrUextra 13881896 13881930 -15122726 + LSU-rRNA_Dme rRNA rRNA 2578 2612 -1288 9 690 812 264 89 8 chrUextra 13882036 13882273 -15122383 - Gypsy4_I LTR Gypsy -4001 2287 2032 9 690 4013 12 95 8 chrUextra 13882270 13882755 -15121901 + CIRCE LINE Composite 3515 4041 -2315 9 690 6594 1 0 0 chrUextra 13882862 13883580 -15121076 - FW_DM LINE Jockey -2987 1705 988 9 690 4246 97 4 7 chrUextra 13883681 13884399 -15120257 - G_DM LINE Jockey -948 1094 396 9 690 6534 17 0 3 chrUextra 13884508 13885230 -15119426 + MAX_I LTR Pao 6021 6740 -1174 9 690 6374 8 1 7 chrUextra 13885330 13886055 -15118601 + LSU-rRNA_Dme rRNA rRNA 590 1310 -2590 9 690 358 218 0 19 chrUextra 13886155 13886258 -15118398 + XDMR_DM Unknown Unknown 260 360 0 9 690 3159 190 7 18 chrUextra 13886172 13886880 -15117776 - SAR_DM Satellite Satellite -353 1119 420 9 690 6377 10 3 0 chrUextra 13886980 13887705 -15116951 + STALKER4_I LTR Gypsy 2226 2952 -3578 9 690 1780 19 0 10 chrUextra 13887808 13888016 -15116640 + QUASIMODO_LTR LTR Gypsy 402 607 -51 9 690 3639 76 24 10 chrUextra 13888023 13888530 -15116126 + QUASIMODO_I LTR Gypsy 30 543 -5517 9 690 3435 173 8 10 chrUextra 13888632 13889355 -15115301 + SAR_DM Satellite Satellite 247 968 -504 9 690 2663 176 11 13 chrUextra 13889459 13890178 -15114478 + BATUMI_I LTR Pao 4010 4802 -3112 9 690 6387 1 0 0 chrUextra 13891105 13891830 -15112826 + LSU-rRNA_Dme rRNA rRNA 246 970 -2930 9 690 2554 176 11 8 chrUextra 13891932 13892625 -15112031 + SAR_DM Satellite Satellite 1 694 -677 9 690 255 150 0 0 chrUextra 13892615 13892655 -15112001 - XDMR_DM Unknown Unknown -280 80 41 9 690 680 185 7 15 chrUextra 13892755 13892892 -15111764 - HETRP_DM Satellite Satellite -208 1664 1529 9 690 554 194 24 16 chrUextra 13893050 13893176 -15111480 - HETRP_DM Satellite Satellite -197 1675 1549 9 690 192 40 0 0 chrUextra 13893176 13893201 -15111455 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 690 680 193 14 14 chrUextra 13893327 13893474 -15111182 - HETRP_DM Satellite Satellite -197 1675 1529 9 86 851 0 0 0 chrUextra 13893601 13893697 -15110959 - NTS_DM Other Other -107 133 38 9 691 840 9 9 36 chrUextra 13893697 13893809 -15110847 - NTS_DM Other Other -107 133 25 9 691 21 57 0 0 chrUextra 13893835 13893870 -15110786 + AT_rich Low_complexity Low_complexity 1 35 0 9 691 1304 18 0 6 chrUextra 13893870 13894035 -15110621 - NTS_DM Other Other -39 201 38 9 691 907 9 0 27 chrUextra 13894035 13894147 -15110509 - NTS_DM Other Other -107 133 25 9 691 698 38 0 9 chrUextra 13894199 13894305 -15110351 - NTS_DM Other Other -39 201 97 9 691 5787 42 1 12 chrUextra 13894408 13895130 -15109526 - R1_DM LINE R1 -3951 1405 692 9 691 1611 11 0 0 chrUextra 13895230 13895519 -15109137 + (TCTTG)n Simple_repeat Simple_repeat 1 289 0 9 691 6084 21 15 1 chrUextra 13896055 13896780 -15107876 + R1_DM LINE R1 3462 4196 -1160 9 691 2796 62 5 19 chrUextra 13897230 13897605 -15107051 - Baggins1 LINE LOA -262 5191 4822 9 691 3173 186 6 6 chrUextra 13897705 13898397 -15106259 - SAR_DM Satellite Satellite -589 883 192 9 691 833 94 8 0 chrUextra 13898302 13898430 -15106226 + ARS406_DM Unknown Unknown 1 129 -224 9 691 1477 0 0 0 chrUextra 13898530 13898702 -15105954 - QUASIMODO_LTR LTR Gypsy -486 172 1 9 691 4500 4 0 0 chrUextra 13898702 13899255 -15105401 - QUASIMODO_I LTR Gypsy 0 6060 5508 9 691 2359 4 4 0 chrUextra 13899355 13899617 -15105039 + TRANSPAC_LTR LTR Gypsy 68 330 0 9 691 3997 9 4 2 chrUextra 13899617 13900080 -15104576 + TRANSPAC_I LTR Gypsy 1 464 -4126 9 691 3272 165 34 18 chrUextra 13900181 13900897 -15103759 + SAR_DM Satellite Satellite 385 1111 -361 9 691 240 143 66 79 chrUextra 13900829 13900905 -15103751 - XDMR_DM Unknown Unknown -9 351 277 9 691 3502 216 1 0 chrUextra 13901006 13901730 -15102926 + ROVER-I_DM LTR Gypsy 2092 2816 -3768 9 691 6613 0 1 0 chrUextra 13901832 13902555 -15102101 - SSU-rRNA_Dme rRNA rRNA -1035 960 237 9 691 5709 10 80 1 chrUextra 13902655 13903379 -15101277 - DM176_I LTR Gypsy -4348 2072 1292 9 691 278 0 0 0 chrUextra 13903480 13903520 -15101136 + R2_DM LINE R2 3566 3605 -2 9 691 3909 5 0 0 chrUextra 13903516 13903949 -15100707 + LSU-rRNA_Dme rRNA rRNA 2578 3010 -890 9 691 6235 26 0 0 chrUextra 13904305 13905030 -15099626 + R1_DM LINE R1 1609 2333 -3023 9 691 6103 29 10 1 chrUextra 13905130 13905855 -15098801 - NINJA_I LTR Pao -2134 3877 3147 9 691 6442 3 1 1 chrUextra 13905955 13906680 -15097976 + R1_DM LINE R1 3509 4233 -1123 9 691 3164 178 8 22 chrUextra 13906780 13907491 -15097165 + SAR_DM Satellite Satellite 418 1118 -354 9 691 586 62 0 0 chrUextra 13907605 13907686 -15096970 + PROTOP_B DNA P 398 478 -675 9 691 4682 70 0 3 chrUextra 13907663 13908282 -15096374 + HOBO DNA hAT 330 946 -2070 9 691 316 24 24 0 chrUextra 13908287 13908329 -15096327 + HOBO DNA hAT 1100 1142 -1874 9 691 3113 191 7 8 chrUextra 13908434 13909136 -15095520 - SAR_DM Satellite Satellite -577 895 195 9 691 675 134 0 0 chrUextra 13909043 13909155 -15095501 + ARS406_DM Unknown Unknown 1 112 -241 9 691 6054 14 41 0 chrUextra 13909255 13909980 -15094676 + R1_DM LINE R1 323 1077 -4279 9 691 3105 181 9 10 chrUextra 13910082 13910768 -15093888 - SAR_DM Satellite Satellite -593 879 195 9 691 807 108 8 0 chrUextra 13910675 13910805 -15093851 + ARS406_DM Unknown Unknown 1 131 -222 9 691 3361 168 14 14 chrUextra 13910905 13911619 -15093037 + SAR_DM Satellite Satellite 224 937 -535 9 691 5486 43 15 32 chrUextra 13911730 13912455 -15092201 + DMCR1A LINE CR1 3371 4083 -387 9 691 813 53 115 0 chrUextra 13912555 13912668 -15091988 + Gypsy6_I LTR Gypsy 147 272 -6740 9 691 5493 10 0 0 chrUextra 13912671 13913280 -15091376 + Gypsy6_I LTR Gypsy 3058 3666 -3346 9 691 3191 183 25 10 chrUextra 13913382 13914100 -15090556 + SAR_DM Satellite Satellite 340 1068 -404 9 691 1949 29 0 55 chrUextra 13914676 13914930 -15089726 - Baggins1 LINE LOA 0 5453 5214 9 691 6193 12 1 3 chrUextra 13915855 13916580 -15088076 + ROO_I LTR Pao 2487 3210 -5046 9 691 3744 45 47 2 chrUextra 13916729 13917219 -15087437 + PROTOP DNA P 1 512 -3968 9 691 26 64 0 0 chrUextra 13917358 13917405 -15087251 + AT_rich Low_complexity Low_complexity 1 47 0 9 691 6356 11 1 6 chrUextra 13918330 13919055 -15085601 - MICROPIA_I LTR Gypsy -1037 3439 2718 9 691 4805 46 64 8 chrUextra 13919157 13919880 -15084776 + STALKER4_I LTR Gypsy 5626 6388 -142 9 691 3347 177 10 10 chrUextra 13919980 13920705 -15083951 + SAR_DM Satellite Satellite 352 1076 -396 9 691 21 89 0 0 chrUextra 13921228 13921284 -15083372 + AT_rich Low_complexity Low_complexity 1 56 0 9 691 2013 13 0 0 chrUextra 13921303 13921529 -15083127 - SSU-rRNA_Dme rRNA rRNA 0 1995 1770 9 691 6238 7 0 0 chrUextra 13921630 13922355 -15082301 + DM297_I LTR Gypsy 1370 2094 -4073 9 691 717 342 77 27 chrUextra 13922624 13923180 -15081476 + MICROPIA_I LTR Gypsy 1 584 -3892 9 691 3555 228 38 48 chrUextra 13923281 13924797 -15079859 - SAR_DM Satellite Satellite -478 1500 1 9 691 782 103 8 0 chrUextra 13924704 13924830 -15079826 + ARS406_DM Unknown Unknown 1 127 -226 9 691 6166 17 1 0 chrUextra 13924930 13925655 -15079001 + STALKER4_I LTR Gypsy 2216 2941 -3589 9 691 1599 6 0 0 chrUextra 13925755 13925933 -15078723 + DOC LINE Jockey 1818 1995 -2730 9 691 4884 6 0 0 chrUextra 13925933 13926480 -15078176 + DOC LINE Jockey 2474 3020 -1705 9 691 6075 33 1 3 chrUextra 13926585 13927305 -15077351 + BATUMI_I LTR Pao 4315 5033 -2930 9 691 6325 7 0 1 chrUextra 13928230 13928955 -15075701 + STALKER4_I LTR Gypsy 1373 2096 -4434 9 691 6390 1 0 0 chrUextra 13929059 13929780 -15074876 - ROO_I LTR Pao -2702 5554 4834 9 691 3583 2 0 2 chrUextra 13929880 13930287 -15074369 + DM176_LTR LTR Gypsy 102 507 0 9 691 6463 1 6 0 chrUextra 13930705 13931430 -15073226 + FW_DM LINE Jockey 290 1018 -3674 9 691 728 104 250 0 chrUextra 13931550 13931694 -15072962 + FB4_DM DNA Tc1 3 182 -3907 9 691 261 33 0 0 chrUextra 13931702 13931732 -15072924 - Baggins1 LINE LOA -697 4756 4727 9 691 5336 90 0 0 chrUextra 13932355 13933080 -15071576 + S_DM DNA Tc1 326 1050 -686 9 691 6391 6 0 0 chrUextra 13933183 13933905 -15070751 - QUASIMODO_I LTR Gypsy -2726 3334 2613 9 691 28 48 0 0 chrUextra 13934293 13934335 -15070321 + AT_rich Low_complexity Low_complexity 1 42 0 9 691 32 0 0 0 chrUextra 13934664 13934696 -15069960 + AT_rich Low_complexity Low_complexity 1 32 0 9 691 2871 6 0 0 chrUextra 13934830 13935154 -15069502 - DM176_LTR LTR Gypsy -183 324 1 9 691 1873 133 51 33 chrUextra 13935154 13935555 -15069101 - STALKER4_I LTR Gypsy -5646 884 427 9 691 5634 3 6 66 chrUextra 13935655 13936380 -15068276 + LSU-rRNA_Dme rRNA rRNA 1262 1942 -1958 9 691 24 0 0 0 chrUextra 13936575 13936599 -15068057 + AT_rich Low_complexity Low_complexity 1 24 0 9 691 1655 28 104 0 chrUextra 13937305 13937368 -15067288 + Stalker3_LTR LTR Gypsy 139 201 -171 9 691 207 0 0 0 chrUextra 13937368 13937391 -15067265 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 9 691 1655 28 104 0 chrUextra 13937391 13937539 -15067117 + Stalker3_LTR LTR Gypsy 202 370 -2 9 691 294 43 87 0 chrUextra 13937539 13937585 -15067071 + Stalker2_I LTR Gypsy 1 50 -7352 9 691 1202 182 32 0 chrUextra 13937778 13938030 -15066626 + Stalker2_I LTR Gypsy 242 501 -6901 9 691 5476 28 1 11 chrUextra 13938140 13938855 -15065801 + DM176_I LTR Gypsy 1 708 -5712 9 691 5214 46 8 0 chrUextra 13939782 13940451 -15064205 + IDEFIX_I LTR Gypsy 191 864 -4764 9 691 287 54 0 0 chrUextra 13940468 13940505 -15064151 + IDEFIX_I LTR Gypsy 2190 2226 -3402 9 691 6505 11 0 1 chrUextra 13940605 13941330 -15063326 - R2_DM LINE R2 -1457 2150 1427 9 691 2807 174 127 10 chrUextra 13941436 13942155 -15062501 + HETA LINE telomeric 4553 5355 -726 9 691 514 119 36 0 chrUextra 13942516 13942600 -15062056 - NTS_DM Other Other -150 90 4 9 691 1345 6 0 18 chrUextra 13942710 13942875 -15061781 - NTS_DM Other Other -78 162 1 9 691 704 10 39 29 chrUextra 13942875 13942979 -15061677 - NTS_DM Other Other 0 240 136 9 691 5717 18 8 1 chrUextra 13943080 13943805 -15060851 + STALKER4_I LTR Gypsy 5770 6499 -31 9 691 674 0 0 12 chrUextra 13943905 13943986 -15060670 - DMRT1B LINE R1 -2726 2457 2378 9 691 5101 36 2 3 chrUextra 13943990 13944630 -15060026 + R1_DM LINE R1 4583 5221 -135 9 691 2310 188 104 21 chrUextra 13944731 13945444 -15059212 - Gypsy12_LTR LTR Gypsy -298 2038 1267 9 691 841 31 0 142 chrUextra 13945555 13945703 -15058953 - CIRCE LINE Composite -4925 1431 1305 9 691 512 318 26 26 chrUextra 13945560 13945828 -15058828 - Gypsy12_I LTR Gypsy -2191 3355 3088 9 691 2276 59 0 75 chrUextra 13945769 13946115 -15058541 - CIRCE LINE Composite -5064 1292 973 9 691 5888 8 3 0 chrUextra 13947205 13947930 -15056726 + STALKER4_I LTR Gypsy 2762 3488 -3042 9 691 356 235 36 73 chrUextra 13948293 13948458 -15056198 + MDG3_I LTR Gypsy 3179 3337 -1649 9 691 635 96 0 0 chrUextra 13948661 13948755 -15055901 + PROTOP_B DNA P 1 94 -1059 9 691 6201 6 1 0 chrUextra 13948855 13949580 -15055076 + R1_DM LINE R1 4487 5212 -144 9 691 4952 102 0 1 chrUextra 13949684 13950404 -15054252 - Gypsy12_I LTR Gypsy -1308 4238 3520 9 691 3281 211 4 6 chrUextra 13950505 13951226 -15053430 - ROVER-I_DM LTR Gypsy -3605 2979 2260 9 691 5846 30 0 0 chrUextra 13951329 13952053 -15052603 - R1_DM LINE R1 -2066 3290 2567 9 691 5774 1 0 35 chrUextra 13952153 13952877 -15051779 - LSU-rRNA_Dme rRNA rRNA -3104 796 98 9 691 6318 0 1 1 chrUextra 13952977 13953701 -15050955 - LSU-rRNA_Dme rRNA rRNA -32 3868 3145 9 691 43 0 0 0 chrUextra 13954303 13954346 -15050310 + AT_rich Low_complexity Low_complexity 1 43 0 9 691 3137 171 8 19 chrUextra 13954625 13955348 -15049308 + SAR_DM Satellite Satellite 389 1103 -369 9 691 488 119 36 0 chrUextra 13955647 13955731 -15048925 - NTS_DM Other Other -150 90 4 9 691 1301 6 0 18 chrUextra 13955841 13956006 -15048650 - NTS_DM Other Other -78 162 1 9 691 1148 6 30 18 chrUextra 13956006 13956173 -15048483 - NTS_DM Other Other 0 240 72 9 691 6093 12 0 0 chrUextra 13956275 13956997 -15047659 - STALKER4_I LTR Gypsy -4116 2414 1693 9 691 1950 213 72 54 chrUextra 13957112 13957821 -15046835 - Gypsy12_LTR LTR Gypsy -778 1558 837 9 691 5990 22 8 0 chrUextra 13957921 13958645 -15046011 + FW_DM LINE Jockey 1869 2598 -2094 9 691 5485 32 1 15 chrUextra 13958745 13959469 -15045187 - BATUMI_I LTR Pao -4570 3393 2680 9 691 2954 175 10 15 chrUextra 13959574 13960287 -15044369 + SAR_DM Satellite Satellite 195 903 -569 9 691 6061 4 0 0 chrUextra 13960393 13961117 -15043539 - ROO_I LTR Pao -3076 5180 4457 9 691 1055 192 34 59 chrUextra 13961220 13961574 -15043082 - Gypsy_LTR LTR Gypsy -137 345 1 9 691 1850 0 0 0 chrUextra 13962041 13962252 -15042404 + LSU-rRNA_Dme rRNA rRNA 3690 3900 0 9 691 22 56 0 0 chrUextra 13962324 13962360 -15042296 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 246 150 0 0 chrUextra 13962365 13962405 -15042251 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 246 150 0 0 chrUextra 13962457 13962497 -15042159 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 246 150 0 0 chrUextra 13962549 13962589 -15042067 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 255 125 0 0 chrUextra 13962632 13962672 -15041984 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 22 56 0 0 chrUextra 13962685 13962721 -15041935 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 728 22 22 0 chrUextra 13962867 13962958 -15041698 - Baggins1 LINE LOA -15 5438 5346 9 691 27 29 0 0 chrUextra 13963281 13963315 -15041341 + AT_rich Low_complexity Low_complexity 1 34 0 9 691 250 33 0 0 chrUextra 13963554 13963584 -15041072 + Baggins1 LINE LOA 4727 4756 -697 9 691 1531 217 84 27 chrUextra 13963689 13964397 -15040259 - SAR_DM Satellite Satellite -484 748 1 9 691 1900 0 0 5 chrUextra 13964552 13964775 -15039881 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 691 21 95 0 0 chrUextra 13964787 13964850 -15039806 + AT_rich Low_complexity Low_complexity 1 63 0 9 691 34 24 0 0 chrUextra 13965063 13965104 -15039552 + AT_rich Low_complexity Low_complexity 1 41 0 9 691 5756 39 0 4 chrUextra 13965337 13966061 -15038595 - BATUMI_I LTR Pao -2690 5273 4553 9 691 277 106 21 0 chrUextra 13966231 13966278 -15038378 - NTS_DM Other Other -192 48 1 9 691 406 135 53 38 chrUextra 13966278 13966409 -15038247 - NTS_DM Other Other 0 240 108 9 691 776 123 0 0 chrUextra 13966417 13966547 -15038109 - NTS_DM Other Other -103 137 8 9 691 259 146 21 0 chrUextra 13966645 13966693 -15037963 - NTS_DM Other Other -191 49 1 9 691 790 138 19 6 chrUextra 13966724 13966885 -15037771 - NTS_DM Other Other -35 205 43 9 691 6364 0 1 0 chrUextra 13966985 13967709 -15036947 + R2_DM LINE R2 1809 2533 -1074 9 691 5179 23 4 52 chrUextra 13967809 13968533 -15036123 - BATUMI_I LTR Pao -4931 3032 2344 9 691 2453 3 3 0 chrUextra 13969073 13969357 -15035299 - SSU-rRNA_Dme rRNA rRNA 0 1995 1711 9 691 2606 209 18 24 chrUextra 13969461 13970181 -15034475 + SAR_DM Satellite Satellite 1 715 -208 9 691 3114 166 13 8 chrUextra 13970282 13970985 -15033671 + SAR_DM Satellite Satellite 371 1076 -396 9 691 6107 0 0 1 chrUextra 13971105 13971829 -15032827 + ROO_I LTR Pao 4221 4943 -3313 9 691 22 35 0 0 chrUextra 13971959 13971988 -15032668 + AT_rich Low_complexity Low_complexity 1 29 0 9 691 51 31 0 0 chrUextra 13972164 13972229 -15032427 + AT_rich Low_complexity Low_complexity 1 65 0 9 691 6130 8 0 7 chrUextra 13972753 13973477 -15031179 + NINJA_I LTR Pao 3044 3762 -2249 9 691 739 78 243 0 chrUextra 13973619 13973833 -15030823 - Invader2_LTR LTR Gypsy 0 266 1 9 691 1070 143 306 14 chrUextra 13973833 13974123 -15030533 - HMSBEAGLE_I LTR Gypsy -356 6173 5797 9 691 959 114 48 0 chrUextra 13974134 13974301 -15030355 - HMSBEAGLE_I LTR Gypsy -901 5628 5454 9 691 530 16 0 0 chrUextra 13974401 13974463 -15030193 - NTS_DM Other Other -178 62 1 9 691 1744 21 17 17 chrUextra 13974463 13974703 -15029953 - NTS_DM Other Other 0 240 1 9 691 1756 17 17 17 chrUextra 13974703 13974943 -15029713 - NTS_DM Other Other 0 240 1 9 691 1213 17 22 22 chrUextra 13974943 13975125 -15029531 - NTS_DM Other Other 0 240 59 9 691 436 0 0 0 chrUextra 13975513 13975563 -15029093 - CIRCE LINE Composite -1376 4980 4931 9 691 3029 31 47 0 chrUextra 13975563 13975949 -15028707 + R1_DM LINE R1 2277 2680 -2676 9 691 2647 25 0 0 chrUextra 13976050 13976368 -15028288 - CIRCE LINE Composite -611 5745 5428 9 691 2286 27 3 53 chrUextra 13976455 13976773 -15027883 - CIRCE LINE Composite -929 5427 5126 9 691 6170 7 0 0 chrUextra 13976873 13977593 -15027063 + DM1731_I LTR Copia 133 852 -3124 9 691 5848 14 0 0 chrUextra 13977697 13978421 -15026235 - STALKER4_I LTR Gypsy -252 6278 5555 9 691 6092 12 1 0 chrUextra 13978521 13979245 -15025411 - DOC2_DM LINE Jockey -123 4670 3946 9 691 3164 180 8 8 chrUextra 13979345 13980069 -15024587 - SAR_DM Satellite Satellite -496 976 253 9 691 1193 40 0 0 chrUextra 13980170 13980320 -15024336 - PROTOP_B DNA P -930 223 74 9 691 5752 43 0 4 chrUextra 13980993 13981717 -15022939 + BATUMI_I LTR Pao 5080 5800 -2163 9 691 2660 196 10 18 chrUextra 13981817 13982486 -15022170 - SAR_DM Satellite Satellite -673 663 1 9 691 435 36 0 0 chrUextra 13982485 13982541 -15022115 + ARS406_DM Unknown Unknown 90 145 -208 9 691 3547 18 31 9 chrUextra 13982641 13983088 -15021568 + CIRCE LINE Composite 3917 4373 -1983 9 691 1681 67 26 42 chrUextra 13983088 13983353 -15021303 + ROVER-LTR_DM LTR Gypsy 1 261 -106 9 691 6098 6 1 1 chrUextra 13983465 13984189 -15020467 - G_DM LINE Jockey -2126 2220 1497 9 691 6031 1 15 0 chrUextra 13984289 13985013 -15019643 - STALKER4_I LTR Gypsy -1182 5348 4614 9 691 6211 4 0 1 chrUextra 13985113 13985837 -15018819 - R1_DM LINE R1 -2692 2664 1942 9 691 6136 3 3 3 chrUextra 13985940 13986661 -15017995 - LSU-rRNA_Dme rRNA rRNA -2220 1680 960 9 691 25 83 0 0 chrUextra 13987348 13987408 -15017248 + AT_rich Low_complexity Low_complexity 1 60 0 9 691 5721 40 0 3 chrUextra 13987585 13988306 -15016350 - BATUMI_I LTR Pao -2930 5033 4315 9 691 6134 8 1 1 chrUextra 13988409 13989129 -15015527 + SSU-rRNA_Dme rRNA rRNA 584 1303 -692 9 691 1196 43 0 6 chrUextra 13989233 13989398 -15015258 + IDEFIX_I LTR Gypsy 118 281 -5347 9 691 488 303 17 11 chrUextra 13989739 13989916 -15014740 + TOM_I LTR Gypsy 418 595 -5517 9 691 5129 3 0 0 chrUextra 13990191 13990781 -15013875 - LSU-rRNA_Dme rRNA rRNA -978 2922 2333 9 691 6170 12 0 0 chrUextra 13990881 13991605 -15013051 + Copia2_I LTR Copia 1432 2155 -2007 9 691 2905 187 20 22 chrUextra 13991706 13992428 -15012228 - SAR_DM Satellite Satellite -602 720 1 9 691 6266 1 0 0 chrUextra 13992529 13993253 -15011403 - DOC LINE Jockey -1397 3328 2605 9 691 2885 191 10 11 chrUextra 13993355 13994075 -15010581 + SAR_DM Satellite Satellite 185 903 -569 9 691 637 35 0 44 chrUextra 13994177 13994268 -15010388 - NTS_DM Other Other -129 111 25 9 691 1174 36 0 12 chrUextra 13994320 13994486 -15010170 - NTS_DM Other Other -39 201 38 9 691 845 18 0 27 chrUextra 13994486 13994598 -15010058 - NTS_DM Other Other -107 133 25 9 691 1230 30 0 6 chrUextra 13994650 13994815 -15009841 - NTS_DM Other Other -39 201 38 9 691 623 25 0 0 chrUextra 13994815 13994895 -15009761 - NTS_DM Other Other -107 133 54 9 691 3713 0 2 0 chrUextra 13995001 13995426 -15009230 + LSU-rRNA_Dme rRNA rRNA 3475 3900 0 9 691 29 28 0 0 chrUextra 13995498 13995534 -15009122 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 246 150 0 0 chrUextra 13995539 13995579 -15009077 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 246 150 0 0 chrUextra 13995631 13995671 -15008985 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 6243 7 0 0 chrUextra 13995825 13996549 -15008107 + FW_DM LINE Jockey 3410 4133 -559 9 691 6159 1 1 4 chrUextra 13997473 13998197 -15006459 + G2_DM LINE Jockey 1105 1826 -1276 9 691 3800 92 11 5 chrUextra 13998297 13998862 -15005794 - TART LINE telomeric -3854 10623 10056 9 691 1092 55 30 30 chrUextra 13998853 13999021 -15005635 - TART LINE telomeric -4530 9947 9780 9 691 3830 108 18 6 chrUextra 13999121 13999843 -15004813 + Gypsy12_I LTR Gypsy 3704 4493 -1053 9 691 474 0 0 0 chrUextra 13999945 14000000 -15004656 + SSU-rRNA_Dme rRNA rRNA 1815 1869 -126 9 691 1108 8 0 8 chrUextra 14000000 14000127 -15004529 + SSU-rRNA_Dme rRNA rRNA 1870 1995 0 9 691 21 89 0 0 chrUextra 14000146 14000202 -15004454 + AT_rich Low_complexity Low_complexity 1 56 0 9 691 2391 0 0 0 chrUextra 14001593 14001857 -15002799 + LSU-rRNA_Dme rRNA rRNA 2255 2518 -1382 9 691 4046 5 0 2 chrUextra 14001870 14002317 -15002339 + R2_DM LINE R2 2 447 -3160 9 691 2387 0 0 0 chrUextra 14002417 14002680 -15001976 + LSU-rRNA_Dme rRNA rRNA 3638 3900 0 9 691 22 56 0 0 chrUextra 14002757 14002793 -15001863 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 262 150 0 0 chrUextra 14002798 14002838 -15001818 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 262 150 0 0 chrUextra 14002890 14002930 -15001726 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 262 150 0 0 chrUextra 14002982 14003022 -15001634 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 244 150 0 0 chrUextra 14003065 14003105 -15001551 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 3443 168 14 14 chrUextra 14003241 14003965 -15000691 - SAR_DM Satellite Satellite -450 1022 299 9 691 2742 202 16 23 chrUextra 14004094 14004787 -14999869 + SAR_DM Satellite Satellite 472 1159 -313 9 691 1620 21 0 2 chrUextra 14004889 14005364 -14999292 + (CACAA)n Simple_repeat Simple_repeat 1 474 0 9 691 2623 0 3 74 chrUextra 14005713 14006049 -14998607 - LSU-rRNA_Dme rRNA rRNA -3588 312 1 9 691 21 95 0 0 chrUextra 14006061 14006124 -14998532 + AT_rich Low_complexity Low_complexity 1 63 0 9 691 34 24 0 0 chrUextra 14006337 14006378 -14998278 + AT_rich Low_complexity Low_complexity 1 41 0 9 691 2923 199 36 21 chrUextra 14006537 14007257 -14997399 - SAR_DM Satellite Satellite -603 730 1 9 691 365 24 0 0 chrUextra 14007361 14007403 -14997253 - NTS_DM Other Other -161 79 38 9 691 851 0 0 0 chrUextra 14007403 14007499 -14997157 - NTS_DM Other Other -107 133 38 9 691 870 9 9 27 chrUextra 14007499 14007610 -14997046 - NTS_DM Other Other -107 133 25 9 691 21 57 0 0 chrUextra 14007636 14007671 -14996985 + AT_rich Low_complexity Low_complexity 1 35 0 9 691 1304 18 0 6 chrUextra 14007671 14007836 -14996820 - NTS_DM Other Other -39 201 38 9 691 890 18 0 27 chrUextra 14007836 14007948 -14996708 - NTS_DM Other Other -107 133 25 9 691 563 36 0 12 chrUextra 14008000 14008085 -14996571 - NTS_DM Other Other -39 201 118 9 691 3299 172 10 14 chrUextra 14008202 14008909 -14995747 + SAR_DM Satellite Satellite 326 1029 -443 9 691 36 55 0 52 chrUextra 14009204 14009320 -14995336 + AT_rich Low_complexity Low_complexity 1 110 0 9 691 3089 3 0 0 chrUextra 14009393 14009733 -14994923 + SSU-rRNA_Dme rRNA rRNA 1 340 -1655 9 691 1980 178 7 7 chrUextra 14009839 14010554 -14994102 + SAR_DM Satellite Satellite 1 715 -836 9 691 2463 99 14 24 chrUextra 14010664 14011380 -14993276 + DMSAT6 Satellite Satellite 1 708 -3 9 691 610 266 18 22 chrUextra 14011481 14011708 -14992948 - QUASIMODO_I LTR Gypsy -308 5752 5527 9 691 2308 68 240 2 chrUextra 14011700 14012201 -14992455 + PROTOP DNA P 176 865 -3615 9 691 4517 0 0 2 chrUextra 14012305 14012804 -14991852 + R1_DM LINE R1 4859 5356 0 9 691 2044 9 0 0 chrUextra 14012802 14013029 -14991627 + LSU-rRNA_Dme rRNA rRNA 2640 2866 -1034 9 691 5881 7 25 4 chrUextra 14013130 14013853 -14990803 - STALKER4_I LTR Gypsy -160 6370 5633 9 691 1576 50 171 109 chrUextra 14013953 14014310 -14990346 + ROO_I LTR Pao 516 894 -7362 9 691 3209 26 0 0 chrUextra 14014299 14014677 -14989979 + ROO_I LTR Pao 1303 1680 -6576 9 691 3232 178 13 11 chrUextra 14014782 14015494 -14989162 - SAR_DM Satellite Satellite -514 958 246 9 691 237 152 0 0 chrUextra 14015455 14015501 -14989155 + ARS406_DM Unknown Unknown 2 47 -306 9 691 6471 1 0 0 chrUextra 14016425 14017149 -14987507 - LSU-rRNA_Dme rRNA rRNA -2656 1244 521 9 691 1268 18 0 18 chrUextra 14017291 14017458 -14987198 - NTS_DM Other Other -39 201 38 9 691 907 9 0 27 chrUextra 14017458 14017570 -14987086 - NTS_DM Other Other -107 133 25 9 691 1304 18 0 6 chrUextra 14017622 14017787 -14986869 - NTS_DM Other Other -39 201 38 9 691 490 16 0 0 chrUextra 14017787 14017848 -14986808 - NTS_DM Other Other -107 133 73 9 691 1055 0 0 0 chrUextra 14017848 14017973 -14986683 - Copia_LTR LTR Copia -3 273 149 9 691 2190 158 20 7 chrUextra 14018074 14018797 -14985859 - SAR_DM Satellite Satellite -1043 732 1 9 691 22 35 0 0 chrUextra 14018911 14018940 -14985716 + AT_rich Low_complexity Low_complexity 1 29 0 9 691 37 39 0 0 chrUextra 14019041 14019092 -14985564 + AT_rich Low_complexity Low_complexity 1 51 0 9 691 28 48 0 0 chrUextra 14019447 14019489 -14985167 + AT_rich Low_complexity Low_complexity 1 42 0 9 691 2383 4 8 0 chrUextra 14019721 14019986 -14984670 + SSU-rRNA_Dme rRNA rRNA 1729 1995 0 9 691 21 89 0 0 chrUextra 14020005 14020061 -14984595 + AT_rich Low_complexity Low_complexity 1 56 0 9 691 255 215 11 151 chrUextra 14020614 14020707 -14983949 + DM176_LTR LTR Gypsy 190 269 -238 9 691 266 176 58 14 chrUextra 14020816 14020885 -14983771 + DM176_LTR LTR Gypsy 295 366 -141 9 691 588 148 40 16 chrUextra 14020902 14021026 -14983630 + DMTOM1_LTR LTR Gypsy 284 410 0 9 691 409 100 14 28 chrUextra 14021026 14021089 -14983567 + DMTOM1_LTR LTR Gypsy 349 410 0 9 691 311 188 53 107 chrUextra 14021089 14021220 -14983436 + ROVER-I_DM LTR Gypsy 1 124 -6460 9 691 6463 6 6 0 chrUextra 14021370 14022093 -14982563 - DOC2_DM LINE Jockey -638 4155 3429 9 691 6534 4 0 0 chrUextra 14022193 14022917 -14981739 - R1_DM LINE R1 -3026 2330 1607 9 691 3087 0 0 0 chrUextra 14023017 14023356 -14981300 - FW_DM LINE Jockey -2095 2597 2259 9 691 3406 20 25 0 chrUextra 14023344 14023741 -14980915 - Gypsy4_I LTR Gypsy -2600 3688 3282 9 691 6584 3 0 1 chrUextra 14023841 14024565 -14980091 - SSU-rRNA_Dme rRNA rRNA -1128 867 145 9 692 6457 1 0 0 chrUextra 14025489 14026213 -14978443 - ROO_I LTR Pao -2176 6080 5357 9 692 3288 146 18 15 chrUextra 14026313 14026911 -14977745 + Stalker2_I LTR Gypsy 286 885 -6517 9 692 305 339 84 42 chrUextra 14027307 14027640 -14977016 + BLASTOPIA_I LTR Gypsy 4134 4480 -1 9 692 6584 4 0 0 chrUextra 14027961 14028685 -14975971 - BS LINE Jockey -204 4922 4199 9 692 2348 219 51 50 chrUextra 14028791 14029478 -14975178 - Gypsy12_LTR LTR Gypsy -1648 688 1 9 692 228 0 0 0 chrUextra 14029478 14029506 -14975150 - Gypsy12_I LTR Gypsy 0 5546 5519 9 692 3273 177 10 19 chrUextra 14029609 14030333 -14974323 - SAR_DM Satellite Satellite -366 1106 390 9 692 3192 212 57 1 chrUextra 14030434 14031157 -14973499 - ROVER-I_DM LTR Gypsy -2834 3750 2988 9 692 6198 18 7 4 chrUextra 14031257 14031981 -14972675 - CIRCE LINE Composite -2394 3962 3237 9 692 6133 22 39 0 chrUextra 14032081 14032805 -14971851 - R1_DM LINE R1 -302 5054 4303 9 692 6428 0 1 1 chrUextra 14034553 14035277 -14969379 - ROO_I LTR Pao -6566 1690 967 9 692 858 300 45 29 chrUextra 14035377 14036097 -14968559 - SAR_DM Satellite Satellite -739 731 1 9 692 377 57 19 0 chrUextra 14036202 14036255 -14968401 - NTS_DM Other Other -183 57 4 9 692 1355 6 0 18 chrUextra 14036365 14036530 -14968126 - NTS_DM Other Other -78 162 1 9 692 1926 4 17 13 chrUextra 14036530 14036769 -14967887 - NTS_DM Other Other 0 240 1 9 692 1127 0 26 19 chrUextra 14036769 14036925 -14967731 - NTS_DM Other Other 0 240 84 9 692 201 121 0 0 chrUextra 14038414 14038447 -14966209 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 692 1486 5 5 0 chrUextra 14038673 14038858 -14965798 + DOC LINE Jockey 4540 4725 0 9 692 180 0 0 0 chrUextra 14038858 14038878 -14965778 + (A)n Simple_repeat Simple_repeat 1 20 0 9 692 1667 259 12 10 chrUextra 14038880 14039391 -14965265 + Copia_I LTR Copia 1527 2038 -2555 9 692 6608 0 0 0 chrUextra 14039497 14040221 -14964435 + DOC LINE Jockey 3716 4439 -286 9 692 2977 182 16 17 chrUextra 14040321 14041045 -14963611 - SAR_DM Satellite Satellite -627 723 1 9 692 2973 181 22 29 chrUextra 14041153 14041869 -14962787 - SAR_DM Satellite Satellite -300 1172 462 9 692 6501 1 3 3 chrUextra 14041969 14042693 -14961963 + SSU-rRNA_Dme rRNA rRNA 1074 1797 -198 9 692 5768 1 4 63 chrUextra 14042793 14043517 -14961139 + LSU-rRNA_Dme rRNA rRNA 1618 2298 -1602 9 692 238 111 0 0 chrUextra 14043629 14043665 -14960991 - ROVER-LTR_DM LTR Gypsy -331 36 1 9 692 5777 13 21 9 chrUextra 14043665 14044341 -14960315 - CIRCE LINE Composite -1983 4373 3690 9 692 6376 8 0 0 chrUextra 14044441 14045165 -14959491 + MDG1_I LTR Gypsy 3295 4018 -2578 9 692 3174 172 11 26 chrUextra 14045265 14045964 -14958692 + SAR_DM Satellite Satellite 430 1118 -354 9 692 403 194 0 19 chrUextra 14045878 14045983 -14958673 - XDMR_DM Unknown Unknown 0 360 258 9 692 3431 161 28 16 chrUextra 14046089 14046811 -14957845 - SAR_DM Satellite Satellite -1087 730 1 9 692 1431 35 0 0 chrUextra 14046913 14047082 -14957574 - FW_DM LINE Jockey -1996 2696 2528 9 692 4522 20 4 20 chrUextra 14047079 14047637 -14957019 - FW_DM LINE Jockey -2462 2230 1682 9 692 3506 39 44 1 chrUextra 14047737 14048461 -14956195 - R1_DM LINE R1 -2098 3258 2466 9 692 6515 3 0 0 chrUextra 14048561 14049285 -14955371 - R1_DM LINE R1 -2068 3288 2565 9 692 6509 7 3 0 chrUextra 14049385 14050109 -14954547 + LSU-rRNA_Dme rRNA rRNA 3000 3725 -175 9 692 686 0 0 0 chrUextra 14050209 14050287 -14954369 - MICROPIA_LTR LTR Gypsy -398 78 1 9 692 2592 81 279 15 chrUextra 14050287 14050349 -14954307 + ACCORD2_I LTR Gypsy 1081 1142 -6070 9 692 228 86 0 0 chrUextra 14050349 14050384 -14954272 + (TAA)n Simple_repeat Simple_repeat 2 36 0 9 692 2592 81 279 15 chrUextra 14050384 14050870 -14953786 + ACCORD2_I LTR Gypsy 1143 1773 -5439 9 692 538 57 0 0 chrUextra 14050863 14050933 -14953723 + ACCORD2_I LTR Gypsy 7122 7191 -21 9 692 899 157 6 34 chrUextra 14051035 14051213 -14953443 - Gypsy12_LTR LTR Gypsy -2163 173 1 9 692 3038 85 88 2 chrUextra 14051212 14051757 -14952899 - Gypsy12_I LTR Gypsy 0 5546 4921 9 692 6217 10 0 0 chrUextra 14051857 14052581 -14952075 + Invader2_I LTR Gypsy 1666 2389 -2203 9 692 3499 168 6 9 chrUextra 14052681 14053379 -14951277 + SAR_DM Satellite Satellite 381 1076 -396 9 692 706 53 0 11 chrUextra 14053506 14053601 -14951055 + ARS406_DM Unknown Unknown 96 189 -164 9 692 2745 187 29 7 chrUextra 14053609 14054229 -14950427 - SAR_DM Satellite Satellite -583 889 256 9 692 701 0 12 0 chrUextra 14054329 14054413 -14950243 - ALUII_DM Unknown Unknown -155 85 1 9 692 21 57 0 0 chrUextra 14054413 14054448 -14950208 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 22 35 0 0 chrUextra 14054645 14054674 -14949982 + AT_rich Low_complexity Low_complexity 1 29 0 9 692 37 39 0 0 chrUextra 14054775 14054826 -14949830 + AT_rich Low_complexity Low_complexity 1 51 0 9 692 5947 33 28 0 chrUextra 14055153 14055877 -14948779 - DMCR1A LINE CR1 -592 3878 3135 9 692 28 48 0 0 chrUextra 14056000 14056042 -14948614 + AT_rich Low_complexity Low_complexity 1 42 0 9 692 6278 1 0 0 chrUextra 14056801 14057525 -14947131 + DMRT1A LINE R1 2123 2846 -2337 9 692 5849 8 3 1 chrUextra 14058453 14059173 -14945483 + QUASIMODO_I LTR Gypsy 3774 4494 -1566 9 692 635 299 25 64 chrUextra 14059304 14059950 -14944706 - GTWIN_I LTR Gypsy -2883 3538 3089 9 692 373 70 0 0 chrUextra 14059940 14059997 -14944659 - TLD2 Unknown Unknown 0 218 162 9 692 21 89 0 0 chrUextra 14060547 14060603 -14944053 + AT_rich Low_complexity Low_complexity 1 56 0 9 692 26 30 0 0 chrUextra 14060731 14060764 -14943892 + AT_rich Low_complexity Low_complexity 1 33 0 9 692 230 233 13 52 chrUextra 14060994 14061071 -14943585 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 9 692 4449 25 3 3 chrUextra 14061073 14061645 -14943011 - PROTOP_A DNA P 0 1105 534 9 692 5318 37 4 9 chrUextra 14061782 14062469 -14942187 - BATUMI_I LTR Pao -5356 2607 1924 9 692 482 65 39 13 chrUextra 14062574 14062652 -14942004 + Gypsy10_LTR LTR Gypsy 285 364 0 9 692 3596 84 27 50 chrUextra 14062652 14063292 -14941364 + Gypsy10_I LTR Gypsy 1 625 -4653 9 692 6288 0 1 0 chrUextra 14063393 14064117 -14940539 - TAHRE LINE telomeric -4799 5664 4940 9 692 6318 0 0 1 chrUextra 14064217 14064940 -14939716 + LSU-rRNA_Dme rRNA rRNA 2738 3459 -441 9 692 6252 1 0 0 chrUextra 14065041 14065765 -14938891 + R2_DM LINE R2 339 1062 -2545 9 692 1542 175 35 6 chrUextra 14066689 14067226 -14937430 - SAR_DM Satellite Satellite -686 745 141 9 692 387 94 16 0 chrUextra 14067226 14067290 -14937366 + ARS406_DM Unknown Unknown 122 186 -167 9 692 1542 175 35 6 chrUextra 14067290 14067413 -14937243 - SAR_DM Satellite Satellite -686 140 1 9 692 6082 4 4 0 chrUextra 14067513 14068237 -14936419 + MAX_I LTR Pao 14 740 -7174 9 692 6131 0 1 1 chrUextra 14068337 14069061 -14935595 - LSU-rRNA_Dme rRNA rRNA -2707 1193 470 9 692 3664 9 0 2 chrUextra 14069161 14069592 -14935064 + BS2 LINE Jockey 4292 4721 0 9 692 264 30 0 0 chrUextra 14069593 14069626 -14935030 + (A)n Simple_repeat Simple_repeat 1 33 0 9 692 1023 102 170 0 chrUextra 14069626 14069885 -14934771 + DMRT1A LINE R1 4418 4720 -463 9 692 653 183 18 18 chrUextra 14069985 14070152 -14934504 + MDG1_LTR LTR Gypsy 246 412 -30 9 692 2391 153 30 5 chrUextra 14070153 14070709 -14933947 + BS3_DM LINE Jockey 1 357 -1433 9 692 40 67 0 0 chrUextra 14071251 14071326 -14933330 + AT_rich Low_complexity Low_complexity 1 75 0 9 692 660 50 59 10 chrUextra 14071399 14071500 -14933156 + DNAREP1_DM LINE Penelope 1 106 -488 9 692 2923 165 40 21 chrUextra 14071637 14072356 -14932300 + SAR_DM Satellite Satellite 191 923 -549 9 692 415 148 58 19 chrUextra 14072457 14072560 -14932096 - ARS406_DM Unknown Unknown -246 107 1 9 692 3336 230 30 23 chrUextra 14072474 14074005 -14930651 + SAR_DM Satellite Satellite 1 1542 -216 9 692 1504 27 183 0 chrUextra 14074105 14074438 -14930218 - R1_DM LINE R1 -1768 3588 3195 9 692 3185 25 0 2 chrUextra 14074436 14074829 -14929827 - R1_DM LINE R1 -2484 2872 2481 9 692 671 12 12 0 chrUextra 14074929 14075015 -14929641 + NTS_DM Other Other 47 133 -107 9 692 1252 18 0 6 chrUextra 14075015 14075180 -14929476 + NTS_DM Other Other 38 201 -39 9 692 21 57 0 0 chrUextra 14075180 14075215 -14929441 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 832 9 9 27 chrUextra 14075241 14075352 -14929304 + NTS_DM Other Other 25 133 -107 9 692 817 0 0 0 chrUextra 14075352 14075448 -14929208 + NTS_DM Other Other 38 133 -107 9 692 1375 25 25 20 chrUextra 14075448 14075650 -14929006 + NTS_DM Other Other 38 240 0 9 692 2950 0 3 0 chrUextra 14075753 14076093 -14928563 + LSU-rRNA_Dme rRNA rRNA 3560 3900 0 9 692 22 56 0 0 chrUextra 14076165 14076201 -14928455 + AT_rich Low_complexity Low_complexity 1 36 0 9 692 246 150 0 0 chrUextra 14076206 14076246 -14928410 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 692 246 150 0 0 chrUextra 14076298 14076338 -14928318 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 692 246 150 0 0 chrUextra 14076390 14076430 -14928226 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 692 3703 0 0 0 chrUextra 14076578 14076999 -14927657 - LSU-rRNA_Dme rRNA rRNA -1692 2208 1788 9 692 2087 4 8 4 chrUextra 14077043 14077301 -14927355 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1530 9 692 6306 4 0 0 chrUextra 14079049 14079773 -14924883 - BS2 LINE Jockey -449 4272 3549 9 692 6337 1 1 0 chrUextra 14079873 14080597 -14924059 - LSU-rRNA_Dme rRNA rRNA -293 3607 2883 9 692 2704 74 14 41 chrUextra 14080697 14081135 -14923521 - Gypsy12_I LTR Gypsy -5120 426 1 9 692 1492 137 11 21 chrUextra 14081135 14081419 -14923237 - Gypsy12A_LTR LTR Gypsy 0 2280 2000 9 692 5853 21 8 0 chrUextra 14081520 14082243 -14922413 + ROO_I LTR Pao 2394 3122 -5134 9 692 6105 12 1 0 chrUextra 14082343 14083066 -14921590 - DM1731_I LTR Copia -2776 1200 477 9 692 6066 1 0 0 chrUextra 14083166 14083889 -14920767 - Invader2_I LTR Gypsy -1467 3125 2403 9 692 2123 97 117 132 chrUextra 14083989 14084699 -14919957 - BATUMI_I LTR Pao -7138 825 127 9 692 4768 60 111 0 chrUextra 14084812 14085535 -14919121 + TRANSIB2 DNA Transib 681 1483 -1361 9 692 4206 31 2 2 chrUextra 14085635 14086157 -14918499 + R1_DM LINE R1 4835 5356 0 9 692 1114 78 6 6 chrUextra 14086190 14086358 -14918298 + R1_DM LINE R1 1 168 -5188 9 692 2912 43 3 8 chrUextra 14086807 14087181 -14917475 - DIVER2_LTR LTR Pao 0 385 14 9 692 6208 0 0 0 chrUextra 14087281 14088004 -14916652 + ROO_I LTR Pao 5898 6620 -1636 9 692 3014 173 13 21 chrUextra 14088104 14088801 -14915855 + SAR_DM Satellite Satellite 421 1111 -361 9 692 325 190 10 29 chrUextra 14088724 14088827 -14915829 - XDMR_DM Unknown Unknown 0 360 260 9 692 5867 11 58 0 chrUextra 14088927 14089650 -14915006 + STALKER4_I LTR Gypsy 3872 4636 -1894 9 692 3189 164 29 13 chrUextra 14089763 14090465 -14914191 - SAR_DM Satellite Satellite -396 1076 364 9 692 6077 3 0 1 chrUextra 14090573 14091296 -14913360 + DM412 LTR Gypsy 5643 6364 -533 9 692 2280 4 0 0 chrUextra 14091396 14091657 -14912999 + R1_DM LINE R1 5096 5356 0 9 692 4003 4 0 0 chrUextra 14091655 14092119 -14912537 + LSU-rRNA_Dme rRNA rRNA 2640 3103 -797 9 692 2957 57 66 0 chrUextra 14092219 14092626 -14912030 + Baggins1 LINE LOA 5004 5437 -16 9 692 6219 1 1 3 chrUextra 14093042 14093765 -14910891 + SSU-rRNA_Dme rRNA rRNA 869 1590 -405 9 692 5321 32 47 0 chrUextra 14093865 14094588 -14910068 - NINJA_I LTR Pao -3754 2257 1501 9 692 6295 0 0 0 chrUextra 14094688 14095411 -14909245 + FW_DM LINE Jockey 670 1392 -3300 9 692 2419 11 0 3 chrUextra 14095511 14095797 -14908859 + CIRCE LINE Composite 4088 4372 -1984 9 692 3590 12 2 0 chrUextra 14095797 14096219 -14908437 + Invader1_LTR LTR Gypsy 1 423 0 9 692 3348 166 8 11 chrUextra 14097159 14097876 -14906780 + SAR_DM Satellite Satellite 332 1046 -426 9 692 6180 1 0 0 chrUextra 14097980 14098703 -14905953 - QUASIMODO_I LTR Gypsy -4912 1148 426 9 692 6138 11 0 0 chrUextra 14098803 14099526 -14905130 + Gypsy4_I LTR Gypsy 1008 1730 -4558 9 692 3013 3 3 0 chrUextra 14100449 14100796 -14903860 + SSU-rRNA_Dme rRNA rRNA 1648 1995 0 9 692 6225 8 0 0 chrUextra 14101272 14101995 -14902661 + Invader3_I LTR Gypsy 512 1234 -3654 9 692 6231 1 0 0 chrUextra 14102095 14102818 -14901838 + ROO_I LTR Pao 4890 5612 -2644 9 692 1566 0 0 0 chrUextra 14102918 14103092 -14901564 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 9 692 1444 17 0 0 chrUextra 14103092 14103265 -14901391 - DIVER2_LTR LTR Pao -91 294 122 9 692 429 103 0 0 chrUextra 14103272 14103340 -14901316 + (CGAGA)n Simple_repeat Simple_repeat 3 70 0 9 692 2873 188 10 9 chrUextra 14103741 14104434 -14900222 - SAR_DM Satellite Satellite -584 888 195 9 692 715 122 0 0 chrUextra 14104341 14104464 -14900192 + ARS406_DM Unknown Unknown 1 123 -230 9 692 4324 0 0 0 chrUextra 14104564 14105066 -14899590 - ROO_I LTR Pao -300 7956 7455 9 692 1853 0 0 0 chrUextra 14105065 14105287 -14899369 - ROO_I LTR Pao -2160 6096 5875 9 692 6144 1 1 0 chrUextra 14106210 14106933 -14897723 + LSU-rRNA_Dme rRNA rRNA 476 1199 -2701 9 692 2851 191 21 19 chrUextra 14107034 14107755 -14896901 + SAR_DM Satellite Satellite 1 722 -203 9 692 198 0 0 0 chrUextra 14108072 14108094 -14896562 + (A)n Simple_repeat Simple_repeat 1 22 0 9 692 317 281 104 86 chrUextra 14109702 14109982 -14894674 - Invader1_LTR LTR Gypsy -55 368 84 9 692 2850 168 15 10 chrUextra 14110325 14111044 -14893612 + SAR_DM Satellite Satellite 1 722 -1037 9 692 6067 22 47 1 chrUextra 14111148 14111871 -14892785 + DMCR1A LINE CR1 2477 3232 -1238 9 692 3070 179 22 25 chrUextra 14111973 14112689 -14891967 + SAR_DM Satellite Satellite 405 1118 -354 9 692 3840 52 43 0 chrUextra 14112794 14113356 -14891300 + PROTOP_A DNA P 573 1105 0 9 692 3418 176 8 8 chrUextra 14113617 14114337 -14890319 - SAR_DM Satellite Satellite -471 1001 282 9 692 6462 1 3 3 chrUextra 14114441 14115163 -14889493 + SSU-rRNA_Dme rRNA rRNA 708 1429 -566 9 692 2885 45 3 0 chrUextra 14115263 14115615 -14889041 + TART_B1 LINE telomeric 3300 3652 -7002 9 692 2579 78 8 37 chrUextra 14115612 14115986 -14888670 + TART_B1 LINE telomeric 4297 4659 -5995 9 692 1194 110 0 0 chrUextra 14116909 14117082 -14887574 - DMRT1B LINE R1 -1877 3306 3134 9 692 532 268 73 6 chrUextra 14117113 14117278 -14887378 + Gypsy12_I LTR Gypsy 3154 3329 -2217 9 692 6482 0 3 3 chrUextra 14117732 14118455 -14886201 - SSU-rRNA_Dme rRNA rRNA -433 1562 840 9 692 3056 188 32 22 chrUextra 14118558 14119278 -14885378 + SAR_DM Satellite Satellite 1 727 -216 9 692 1291 53 75 0 chrUextra 14119397 14119754 -14884902 - PROTOP_A DNA P -339 766 520 9 692 1810 58 0 0 chrUextra 14119741 14119967 -14884689 - PROTOP_A DNA P -806 299 74 9 692 5807 40 14 3 chrUextra 14120201 14120924 -14883732 + R1_DM LINE R1 638 1368 -3988 9 692 6074 12 0 0 chrUextra 14121024 14121747 -14882909 - IDEFIX_I LTR Gypsy -1429 4199 3477 9 692 1857 0 0 0 chrUextra 14121847 14122048 -14882608 + LSU-rRNA_Dme rRNA rRNA 2455 2655 -1245 9 692 4676 2 0 0 chrUextra 14122053 14122570 -14882086 + R1_DM LINE R1 1447 1963 -3393 9 692 5937 29 8 4 chrUextra 14123493 14124216 -14880440 + MDG1_I LTR Gypsy 1424 2149 -4447 9 692 6513 1 0 0 chrUextra 14124316 14125039 -14879617 - R1_DM LINE R1 -1937 3419 2697 9 692 6441 6 0 3 chrUextra 14125139 14125862 -14878794 + R1_DM LINE R1 4185 4905 -451 9 692 3617 60 28 0 chrUextra 14126785 14127508 -14877148 - DM297_I LTR Gypsy -2385 3782 3007 9 692 3149 185 14 12 chrUextra 14127608 14128331 -14876325 + SAR_DM Satellite Satellite 260 983 -489 9 692 4070 51 98 33 chrUextra 14128431 14129064 -14875592 - ROO_I LTR Pao -7469 787 114 9 692 410 88 0 0 chrUextra 14129097 14129154 -14875502 - ROO_LTR LTR Pao 0 428 372 9 692 6448 7 0 0 chrUextra 14129254 14129977 -14874679 - Invader2_I LTR Gypsy -3237 1355 633 9 692 974 107 0 7 chrUextra 14130079 14130230 -14874426 + (GAGAA)n Simple_repeat Simple_repeat 5 154 0 9 692 4087 13 4 0 chrUextra 14131742 14132227 -14872429 + DOC LINE Jockey 3861 4725 0 9 692 6601 0 1 1 chrUextra 14132546 14133269 -14871387 + LSU-rRNA_Dme rRNA rRNA 2911 3633 -267 9 692 488 153 24 0 chrUextra 14134371 14134456 -14870200 - NTS_DM Other Other -150 90 4 9 692 1355 6 0 18 chrUextra 14134566 14134731 -14869925 - NTS_DM Other Other -78 162 1 9 692 1377 6 22 16 chrUextra 14134731 14134915 -14869741 - NTS_DM Other Other 0 240 56 9 692 514 119 36 0 chrUextra 14135025 14135109 -14869547 - NTS_DM Other Other -150 90 4 9 692 1355 6 0 18 chrUextra 14135220 14135385 -14869271 - NTS_DM Other Other -78 162 1 9 692 1926 4 17 13 chrUextra 14135385 14135624 -14869032 - NTS_DM Other Other 0 240 1 9 692 794 0 35 26 chrUextra 14135624 14135738 -14868918 - NTS_DM Other Other 0 240 126 9 692 3106 196 14 20 chrUextra 14135847 14136557 -14868099 + SAR_DM Satellite Satellite 1 705 -203 9 692 564 200 133 15 chrUextra 14136670 14136873 -14867783 - Gypsy12_LTR LTR Gypsy -654 1682 1456 9 692 1545 187 159 31 chrUextra 14136876 14137384 -14867272 - Gypsy12_LTR LTR Gypsy -661 1675 1103 9 692 2192 12 4 0 chrUextra 14137484 14137734 -14866922 - DM176_I LTR Gypsy -6169 251 1 9 692 2989 48 61 48 chrUextra 14137734 14138207 -14866449 - DM176_LTR LTR Gypsy -27 480 16 9 692 870 9 9 27 chrUextra 14138322 14138433 -14866223 + NTS_DM Other Other 25 133 -107 9 692 1304 18 0 6 chrUextra 14138433 14138598 -14866058 + NTS_DM Other Other 38 201 -39 9 692 21 57 0 0 chrUextra 14138598 14138633 -14866023 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 870 9 9 27 chrUextra 14138659 14138770 -14865886 + NTS_DM Other Other 25 133 -107 9 692 851 0 0 0 chrUextra 14138770 14138866 -14865790 + NTS_DM Other Other 38 133 -107 9 692 1272 25 0 6 chrUextra 14138866 14139030 -14865626 + NTS_DM Other Other 38 200 -40 9 692 579 298 28 28 chrUextra 14139497 14139818 -14864838 + DM176_I LTR Gypsy 1839 2159 -4261 9 692 713 21 21 11 chrUextra 14139759 14139853 -14864803 - TLD3 Unknown Unknown -3 169 75 9 692 907 9 0 27 chrUextra 14139972 14140084 -14864572 - NTS_DM Other Other -107 133 25 9 692 1304 18 0 6 chrUextra 14140136 14140301 -14864355 - NTS_DM Other Other -39 201 38 9 692 907 9 0 27 chrUextra 14140301 14140413 -14864243 - NTS_DM Other Other -107 133 25 9 692 22 56 0 0 chrUextra 14140439 14140475 -14864181 + AT_rich Low_complexity Low_complexity 1 36 0 9 692 244 150 0 0 chrUextra 14140488 14140528 -14864128 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 692 262 150 0 0 chrUextra 14140571 14140611 -14864045 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 692 6153 22 31 0 chrUextra 14140779 14141499 -14863157 + DMCR1A LINE CR1 1095 1836 -2634 9 692 414 204 0 10 chrUextra 14141599 14141703 -14862953 + XDMR_DM Unknown Unknown 258 360 0 9 692 3220 178 6 17 chrUextra 14141618 14142320 -14862336 - SAR_DM Satellite Satellite -354 1118 425 9 692 5802 0 2 0 chrUextra 14142422 14143056 -14861600 + SSU-rRNA_Dme rRNA rRNA 1361 1995 0 9 692 21 89 0 0 chrUextra 14143075 14143131 -14861525 + AT_rich Low_complexity Low_complexity 1 56 0 9 692 997 20 26 26 chrUextra 14143245 14143397 -14861259 + NTS_DM Other Other 89 240 0 9 692 1811 21 17 17 chrUextra 14143397 14143637 -14861019 + NTS_DM Other Other 1 240 0 9 692 1805 17 17 21 chrUextra 14143637 14143878 -14860778 + NTS_DM Other Other 1 240 0 9 692 784 22 0 0 chrUextra 14143878 14143968 -14860688 + NTS_DM Other Other 1 90 -150 9 692 6071 26 8 1 chrUextra 14144068 14144788 -14859868 + DOC3_DM LINE Jockey 3008 3732 -1008 9 692 514 119 36 0 chrUextra 14145142 14145226 -14859430 - NTS_DM Other Other -150 90 4 9 692 1355 6 0 18 chrUextra 14145336 14145501 -14859155 - NTS_DM Other Other -78 162 1 9 692 774 9 35 26 chrUextra 14145501 14145614 -14859042 - NTS_DM Other Other 0 240 127 9 692 484 119 35 12 chrUextra 14145830 14145915 -14858741 + NTS_DM Other Other 4 90 -150 9 692 21 71 0 0 chrUextra 14146188 14146230 -14858426 + AT_rich Low_complexity Low_complexity 1 42 0 9 692 3709 142 78 37 chrUextra 14146537 14147260 -14857396 - STALKER4_I LTR Gypsy -4345 2185 1434 9 692 6128 8 4 4 chrUextra 14147360 14148083 -14856573 + STALKER4_I LTR Gypsy 1330 2052 -4478 9 692 6510 1 0 0 chrUextra 14148183 14148906 -14855750 + R1_DM LINE R1 2606 3328 -2028 9 692 6380 1 1 0 chrUextra 14149006 14149729 -14854927 + MDG3_I LTR Gypsy 3155 3878 -1108 9 692 3164 173 78 8 chrUextra 14149829 14150547 -14854109 + SAR_DM Satellite Satellite 273 1040 -432 9 692 300 132 12 24 chrUextra 14150794 14150879 -14853777 + A-rich Low_complexity Low_complexity 1 84 0 9 692 1544 47 5 0 chrUextra 14151182 14151375 -14853281 - DMRT1A LINE R1 -11 5172 4979 9 692 6505 7 0 0 chrUextra 14151475 14152198 -14852458 - R1_DM LINE R1 -181 5175 4453 9 692 3875 15 23 4 chrUextra 14152298 14152771 -14851885 - BATUMI_I LTR Pao -7481 482 1 9 692 2035 8 0 28 chrUextra 14152771 14153021 -14851635 - BATUMI_LTR LTR Pao 0 272 30 9 692 374 178 56 0 chrUextra 14153126 14153216 -14851440 - PROTOP_B DNA P -190 963 869 9 692 2328 35 10 0 chrUextra 14153344 14153634 -14851022 - Gypsy7_I LTR Gypsy -1077 3907 3615 9 692 876 91 67 1 chrUextra 14153635 14153784 -14850872 - Gypsy7_I LTR Gypsy -1650 3334 3199 9 692 6376 4 4 3 chrUextra 14153944 14154667 -14849989 + LSU-rRNA_Dme rRNA rRNA 985 1708 -2192 9 692 1304 24 0 6 chrUextra 14154767 14154935 -14849721 - NTS_DM Other Other -36 204 38 9 692 851 0 0 0 chrUextra 14154935 14155031 -14849625 - NTS_DM Other Other -107 133 38 9 692 870 9 9 27 chrUextra 14155031 14155142 -14849514 - NTS_DM Other Other -107 133 25 9 692 21 57 0 0 chrUextra 14155168 14155203 -14849453 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 1304 18 0 6 chrUextra 14155203 14155368 -14849288 - NTS_DM Other Other -39 201 38 9 692 889 18 0 27 chrUextra 14155368 14155480 -14849176 - NTS_DM Other Other -107 133 25 9 86 3693 61 10 0 chrUextra 14155642 14156133 -14848523 - PROTOP_B DNA P 0 1153 658 9 693 28 0 0 0 chrUextra 14156133 14156161 -14848495 + AT_rich Low_complexity Low_complexity 1 28 0 9 693 1136 29 0 0 chrUextra 14156175 14156313 -14848343 - PROTOP_B DNA P -841 312 175 9 693 4801 9 37 0 chrUextra 14156414 14156987 -14847669 + IDEFIX_LTR LTR Gypsy 1 594 0 9 693 36 0 0 0 chrUextra 14156987 14157023 -14847633 + AT_rich Low_complexity Low_complexity 1 36 0 9 693 3811 2 0 0 chrUextra 14157236 14157652 -14847004 - DMRT1B LINE R1 -4767 416 1 9 693 772 43 0 0 chrUextra 14157865 14157959 -14846697 + R1_DM LINE R1 2555 2648 -2708 9 693 6355 8 3 1 chrUextra 14158062 14158782 -14845874 - G_DM LINE Jockey -2199 2147 1427 9 693 26 30 0 0 chrUextra 14159240 14159273 -14845383 + AT_rich Low_complexity Low_complexity 1 33 0 9 693 23 68 0 0 chrUextra 14159319 14159363 -14845293 + AT_rich Low_complexity Low_complexity 1 44 0 9 693 21 89 0 0 chrUextra 14159401 14159457 -14845199 + AT_rich Low_complexity Low_complexity 1 56 0 9 693 2124 206 24 7 chrUextra 14159709 14160421 -14844235 + SAR_DM Satellite Satellite 1 724 -668 9 693 6167 26 1 1 chrUextra 14160528 14161251 -14843405 - R1_DM LINE R1 -10 5346 4624 9 693 6104 10 0 0 chrUextra 14161351 14162074 -14842582 + QUASIMODO_I LTR Gypsy 764 1486 -4574 9 693 2671 182 51 31 chrUextra 14162175 14162882 -14841774 + SAR_DM Satellite Satellite 399 1119 -353 9 693 366 184 10 30 chrUextra 14162796 14162897 -14841759 - XDMR_DM Unknown Unknown 0 360 262 9 693 497 198 115 88 chrUextra 14163011 14163296 -14841360 + GTWIN_I LTR Gypsy 54 410 -6011 9 693 2489 127 12 20 chrUextra 14163318 14163720 -14840936 + GTWIN_I LTR Gypsy 466 864 -5557 9 693 27 0 0 0 chrUextra 14164020 14164047 -14840609 + AT_rich Low_complexity Low_complexity 1 27 0 9 693 23 86 0 0 chrUextra 14164093 14164151 -14840505 + AT_rich Low_complexity Low_complexity 1 58 0 9 693 22 35 0 0 chrUextra 14164185 14164214 -14840442 + AT_rich Low_complexity Low_complexity 1 29 0 9 693 21 0 0 0 chrUextra 14164290 14164311 -14840345 + AT_rich Low_complexity Low_complexity 1 21 0 9 693 6078 15 1 3 chrUextra 14164643 14165366 -14839290 + DMRT1B LINE R1 415 1136 -4047 9 693 21 95 0 0 chrUextra 14165594 14165657 -14838999 + AT_rich Low_complexity Low_complexity 1 63 0 9 693 4233 0 0 50 chrUextra 14165669 14166189 -14838467 + LSU-rRNA_Dme rRNA rRNA 1 494 -3406 9 693 348 121 17 0 chrUextra 14166290 14166348 -14838308 + ARS406_DM Unknown Unknown 107 165 -188 9 693 467 16 0 0 chrUextra 14167112 14167173 -14837483 + NTS_DM Other Other 73 133 -107 9 693 1252 18 0 6 chrUextra 14167173 14167338 -14837318 + NTS_DM Other Other 38 201 -39 9 693 852 18 0 27 chrUextra 14167390 14167502 -14837154 + NTS_DM Other Other 25 133 -107 9 693 1252 18 0 6 chrUextra 14167502 14167667 -14836989 + NTS_DM Other Other 38 201 -39 9 693 21 57 0 0 chrUextra 14167667 14167702 -14836954 + AT_rich Low_complexity Low_complexity 1 35 0 9 693 804 10 9 28 chrUextra 14167728 14167835 -14836821 + NTS_DM Other Other 25 129 -111 9 693 6101 1 0 0 chrUextra 14167935 14168658 -14835998 + TABOR_I LTR Gypsy 1497 2219 -4117 9 693 5934 0 0 0 chrUextra 14168758 14169481 -14835175 + QUASIMODO_I LTR Gypsy 3293 4015 -2045 9 693 6012 18 1 1 chrUextra 14169581 14170304 -14834352 + DOC2_DM LINE Jockey 2164 2886 -1907 9 693 2760 47 6 0 chrUextra 14170404 14170766 -14833890 - Baggins1 LINE LOA -299 5154 4791 9 693 6133 3 1 1 chrUextra 14171227 14171950 -14832706 + LSU-rRNA_Dme rRNA rRNA 581 1303 -2597 9 693 3004 181 6 9 chrUextra 14172053 14172740 -14831916 - SAR_DM Satellite Satellite -593 879 195 9 693 696 127 0 0 chrUextra 14172647 14172773 -14831883 + ARS406_DM Unknown Unknown 1 126 -227 9 693 6166 1 0 0 chrUextra 14172873 14173595 -14831061 - DM176_I LTR Gypsy -1928 4492 3771 9 693 6253 7 0 0 chrUextra 14173696 14174419 -14830237 + DM1731_I LTR Copia 938 1660 -2316 9 693 5813 29 0 3 chrUextra 14175342 14176065 -14828591 - R1_DM LINE R1 -1716 3640 2920 9 693 5917 8 4 0 chrUextra 14176165 14176888 -14827768 + STALKER4_I LTR Gypsy 4699 5424 -1106 9 693 6141 3 0 0 chrUextra 14176988 14177711 -14826945 + STALKER4_I LTR Gypsy 1400 2122 -4408 9 693 3121 18 91 6 chrUextra 14177811 14178534 -14826122 + R1_DM LINE R1 3403 4187 -1169 9 693 1719 171 8 7 chrUextra 14178636 14179357 -14825299 - SAR_DM Satellite Satellite -514 722 1 9 693 2972 173 18 22 chrUextra 14179458 14180174 -14824482 + SAR_DM Satellite Satellite 237 949 -523 9 693 3054 58 7 5 chrUextra 14180280 14180697 -14823959 - R1_DM LINE R1 -4938 418 1 9 693 2296 15 0 0 chrUextra 14180732 14181003 -14823653 - R1_DM LINE R1 -2 5354 5084 9 693 2982 198 13 19 chrUextra 14181103 14181826 -14822830 + SAR_DM Satellite Satellite 1 718 -208 9 693 6325 1 1 0 chrUextra 14181926 14182649 -14822007 - LSU-rRNA_Dme rRNA rRNA -168 3732 3009 9 693 401 167 9 29 chrUextra 14182749 14182854 -14821802 + XDMR_DM Unknown Unknown 258 360 0 9 693 2886 172 16 26 chrUextra 14182768 14183470 -14821186 - SAR_DM Satellite Satellite -353 1119 425 9 693 266 282 107 89 chrUextra 14183880 14184160 -14820496 - Invader1_LTR LTR Gypsy -55 368 84 9 693 2997 173 48 10 chrUextra 14184395 14185118 -14819538 - SAR_DM Satellite Satellite -466 1006 256 9 693 2935 34 50 3 chrUextra 14185218 14185941 -14818715 + PROTOP_A DNA P 317 1073 -32 9 693 335 296 19 19 chrUextra 14186306 14186468 -14818188 - MDG3_I LTR Gypsy -1562 3424 3263 9 693 879 178 102 15 chrUextra 14186897 14187102 -14817554 + DMLTR5 LTR Gypsy 44 266 0 9 693 351 49 65 16 chrUextra 14187101 14187163 -14817493 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 693 249 128 0 21 chrUextra 14187185 14187233 -14817423 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 693 2337 108 21 27 chrUextra 14187687 14188388 -14816268 + DMSAT6 Satellite Satellite 1 697 -152 9 693 3236 162 11 10 chrUextra 14189352 14190056 -14814600 - SAR_DM Satellite Satellite -396 1076 372 9 693 6295 6 0 0 chrUextra 14190156 14190879 -14813777 - LINEJ1_DM LINE Jockey -1525 3495 2773 9 693 842 67 14 36 chrUextra 14190980 14191120 -14813536 - ROO_I LTR Pao -8006 250 114 9 693 2174 32 153 3 chrUextra 14191153 14191525 -14813131 - ROO_LTR LTR Pao 0 428 1 9 693 26 50 0 0 chrUextra 14191560 14191600 -14813056 + AT_rich Low_complexity Low_complexity 1 40 0 9 693 1999 20 0 4 chrUextra 14191802 14192048 -14812608 + DM1731_I LTR Copia 1971 2215 -1761 9 693 4069 8 2 0 chrUextra 14192046 14192525 -14812131 + DM1731_I LTR Copia 2357 2836 -1140 9 693 1333 12 6 12 chrUextra 14192787 14192956 -14811700 - TLD3 Unknown Unknown -3 169 2 9 693 898 288 19 19 chrUextra 14192934 14193348 -14811308 + ROVER-I_DM LTR Gypsy 2576 2989 -3595 9 693 1856 69 4 26 chrUextra 14193448 14193715 -14810941 + Baggins1 LINE LOA 4931 5191 -262 9 693 3315 174 7 6 chrUextra 14194272 14194994 -14809662 - SAR_DM Satellite Satellite -396 1076 354 9 693 6266 0 0 0 chrUextra 14195095 14195817 -14808839 + R1_DM LINE R1 2267 2988 -2368 9 693 5640 37 15 0 chrUextra 14195917 14196640 -14808016 - R1_DM LINE R1 -2129 3227 2494 9 693 4237 43 2 0 chrUextra 14196932 14197463 -14807193 + Baggins1 LINE LOA 4791 5322 -131 9 693 2856 177 17 39 chrUextra 14197563 14198286 -14806370 - SAR_DM Satellite Satellite -470 1002 296 9 693 6220 1 1 3 chrUextra 14198386 14199109 -14805547 + SSU-rRNA_Dme rRNA rRNA 631 1352 -643 9 693 343 264 0 0 chrUextra 14199212 14199303 -14805353 - Copia2_I LTR Copia -3505 657 567 9 693 637 192 6 50 chrUextra 14200058 14200217 -14804439 - HETRP_DM Satellite Satellite -203 1669 1518 9 693 649 217 0 32 chrUextra 14200334 14200491 -14804165 - HETRP_DM Satellite Satellite -203 1669 1518 9 693 477 217 8 16 chrUextra 14200608 14200730 -14803926 - HETRP_DM Satellite Satellite -203 1669 1549 9 693 192 40 0 0 chrUextra 14200730 14200755 -14803901 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 693 415 165 35 52 chrUextra 14200855 14200970 -14803686 + XDMR_DM Unknown Unknown 248 360 0 9 693 2851 180 9 22 chrUextra 14200884 14201578 -14803078 - SAR_DM Satellite Satellite -354 1118 434 9 693 3102 164 8 28 chrUextra 14201678 14202399 -14802257 + SAR_DM Satellite Satellite 407 1113 -359 9 693 683 103 111 0 chrUextra 14202501 14202618 -14802038 - Invader1_I LTR Gypsy -1159 2027 1898 9 693 4257 50 64 0 chrUextra 14202618 14203224 -14801432 + PROTOP DNA P 1 645 -3835 9 693 2119 160 13 9 chrUextra 14203324 14203778 -14800878 + SAR_DM Satellite Satellite 448 903 -569 9 693 1053 198 4 4 chrUextra 14203793 14204047 -14800609 + SAR_DM Satellite Satellite 496 749 -723 9 693 5797 17 26 7 chrUextra 14204149 14204870 -14799786 - ACCORD2_I LTR Gypsy -6258 954 220 9 693 28 48 0 0 chrUextra 14205208 14205250 -14799406 + AT_rich Low_complexity Low_complexity 1 42 0 9 693 6158 3 3 3 chrUextra 14207439 14208162 -14796494 + SSU-rRNA_Dme rRNA rRNA 873 1595 -400 9 693 6033 0 1 0 chrUextra 14208262 14208985 -14795671 - STALKER4_I LTR Gypsy -2922 3608 2885 9 693 3616 12 0 0 chrUextra 14209205 14209635 -14795021 + Gypsy5_LTR LTR Gypsy 1 430 0 9 693 413 0 0 0 chrUextra 14209635 14209682 -14794974 + Gypsy5_I LTR Gypsy 1 47 -6462 9 693 5975 3 0 3 chrUextra 14209908 14210596 -14794060 - SSU-rRNA_Dme rRNA rRNA -1309 686 1 9 693 5947 9 10 0 chrUextra 14210730 14210784 -14793872 + SSU-rRNA_Dme rRNA rRNA 151 204 -1791 9 693 243 0 0 0 chrUextra 14210784 14210811 -14793845 + (TTA)n Simple_repeat Simple_repeat 1 27 0 9 693 5947 9 10 0 chrUextra 14210811 14211452 -14793204 + SSU-rRNA_Dme rRNA rRNA 205 851 -1144 9 693 6142 4 3 0 chrUextra 14211552 14212274 -14792382 + R1_DM LINE R1 1584 2307 -3049 9 693 6285 1 0 0 chrUextra 14212374 14213096 -14791560 - R1_DM LINE R1 -2713 2643 1922 9 693 6161 1 1 4 chrUextra 14214018 14214740 -14789916 - LSU-rRNA_Dme rRNA rRNA -2407 1493 774 9 693 476 131 36 0 chrUextra 14215022 14215106 -14789550 - NTS_DM Other Other -150 90 4 9 693 1301 6 0 18 chrUextra 14215216 14215381 -14789275 - NTS_DM Other Other -78 162 1 9 693 1293 6 22 17 chrUextra 14215381 14215562 -14789094 - NTS_DM Other Other 0 240 59 9 693 3011 184 10 7 chrUextra 14215662 14216362 -14788294 + SAR_DM Satellite Satellite 375 1076 -396 9 693 4069 60 17 107 chrUextra 14216484 14217206 -14787450 - CIRCE LINE Composite -621 5735 5079 9 693 22 35 0 0 chrUextra 14218821 14218850 -14785806 + AT_rich Low_complexity Low_complexity 1 29 0 9 693 904 306 37 37 chrUextra 14218961 14219671 -14784985 + HMSBEAGLE_I LTR Gypsy 4541 5250 -1279 9 693 6295 0 0 0 chrUextra 14219772 14220494 -14784162 - DOC LINE Jockey -1955 2770 2049 9 693 6256 3 0 0 chrUextra 14220594 14221316 -14783340 - DOC LINE Jockey -1945 2780 2059 9 693 1756 63 0 4 chrUextra 14221416 14221655 -14783001 - PROTOP DNA P -4169 311 74 9 693 6578 4 0 1 chrUextra 14222238 14222960 -14781696 + DOC LINE Jockey 1891 2611 -2114 9 693 2190 4 8 4 chrUextra 14223060 14223314 -14781342 + LSU-rRNA_Dme rRNA rRNA 1537 1791 -2109 9 693 3965 5 0 0 chrUextra 14223355 14223782 -14780874 + LSU-rRNA_Dme rRNA rRNA 1788 2214 -1686 9 693 3323 201 12 20 chrUextra 14223883 14224604 -14780052 - SAR_DM Satellite Satellite -610 715 1 9 693 3340 176 8 13 chrUextra 14224707 14225422 -14779234 + SAR_DM Satellite Satellite 192 903 -569 9 693 258 130 0 0 chrUextra 14225526 14225572 -14779084 + HOBO DNA hAT 2971 3016 0 9 693 820 170 32 19 chrUextra 14225579 14225735 -14778921 - HETRP_DM Satellite Satellite -197 1675 1518 9 693 620 208 70 13 chrUextra 14225866 14226022 -14778634 - HETRP_DM Satellite Satellite -190 1682 1518 9 693 384 150 112 0 chrUextra 14226156 14226236 -14778420 + DNAREP1_DM LINE Penelope 67 155 -439 9 693 1316 0 0 0 chrUextra 14226351 14226494 -14778162 - ROO_LTR LTR Pao -285 143 1 9 693 4942 9 21 0 chrUextra 14226494 14227070 -14777586 - ROO_I LTR Pao 0 8256 7669 9 693 6629 1 0 0 chrUextra 14227170 14227891 -14776765 + DM176_I LTR Gypsy 3863 4583 -1837 9 693 6588 6 0 4 chrUextra 14227992 14228714 -14775942 - CIRCE LINE Composite -2262 4094 3376 9 693 5598 47 61 1 chrUextra 14228814 14229536 -14775120 - Baggins1 LINE LOA -4368 1085 321 9 693 6761 1 0 0 chrUextra 14229636 14230358 -14774298 - SSU-rRNA_Dme rRNA rRNA -978 1017 296 9 693 6425 4 0 12 chrUextra 14231280 14232002 -14772654 + DOC LINE Jockey 267 979 -3746 9 693 5477 58 44 0 chrUextra 14232116 14232824 -14771832 + ROOA_I LTR Pao 5438 6176 -673 9 693 821 26 0 9 chrUextra 14232924 14233038 -14771618 + NTS_DM Other Other 89 201 -39 9 693 936 9 0 27 chrUextra 14233090 14233202 -14771454 + NTS_DM Other Other 25 133 -107 9 693 1350 18 0 6 chrUextra 14233202 14233367 -14771289 + NTS_DM Other Other 38 201 -39 9 693 906 9 0 35 chrUextra 14233419 14233532 -14771124 + NTS_DM Other Other 25 133 -107 9 693 951 9 0 9 chrUextra 14233532 14233646 -14771010 + NTS_DM Other Other 38 150 -90 9 693 5364 10 0 0 chrUextra 14233746 14234345 -14770311 + G_DM LINE Jockey 3036 3634 -712 9 693 1070 32 0 0 chrUextra 14234343 14234468 -14770188 + G_DM LINE Jockey 3883 4007 -339 9 693 6609 10 0 0 chrUextra 14234568 14235290 -14769366 + STALKER4_I LTR Gypsy 3881 4602 -1928 9 693 1357 0 0 7 chrUextra 14235962 14236112 -14768544 - SSU-rRNA_Dme rRNA rRNA 0 1995 1847 9 693 6280 25 0 0 chrUextra 14236212 14236934 -14767722 - R1_DM LINE R1 -2355 3001 2280 9 693 5939 25 0 18 chrUextra 14237034 14237754 -14766902 + MDG1_I LTR Gypsy 5451 6157 -439 9 693 1608 11 0 0 chrUextra 14237857 14238040 -14766616 + R1_DM LINE R1 4884 5066 -290 9 693 1004 35 0 0 chrUextra 14238037 14238151 -14766505 + R1_DM LINE R1 5243 5356 0 9 693 3029 66 5 5 chrUextra 14238184 14238578 -14766078 + R1_DM LINE R1 1 394 -4962 9 693 1064 298 20 27 chrUextra 14238680 14239131 -14765525 + Invader1_I LTR Gypsy 2122 2569 -617 9 693 6611 3 0 0 chrUextra 14239500 14240222 -14764434 + G2_DM LINE Jockey 628 1349 -1753 9 693 229 330 35 9 chrUextra 14240565 14240678 -14763978 - Copia2_I LTR Copia -3931 231 116 9 693 1061 8 0 0 chrUextra 14240926 14241044 -14763612 - Copia2_I LTR Copia -2248 1914 1797 9 693 3060 186 31 22 chrUextra 14241144 14241863 -14762793 + SAR_DM Satellite Satellite 422 1146 -326 9 693 3553 168 8 10 chrUextra 14242791 14243500 -14761156 + SAR_DM Satellite Satellite 369 1076 -396 9 693 6416 18 10 0 chrUextra 14243610 14244332 -14760324 - LSU-rRNA_Dme rRNA rRNA -187 3713 2985 9 693 970 271 77 26 chrUextra 14244589 14245097 -14759559 - QUASIMODO_I LTR Gypsy 0 6060 5527 9 693 507 31 108 0 chrUextra 14245089 14245154 -14759502 + PROTOP_A DNA P 176 247 -858 9 693 6691 1 3 0 chrUextra 14245254 14245976 -14758680 - LSU-rRNA_Dme rRNA rRNA -1241 2659 1936 9 693 6564 3 3 0 chrUextra 14246076 14246798 -14757858 + FW_DM LINE Jockey 737 1460 -3232 9 693 5601 48 18 28 chrUextra 14246898 14247620 -14757036 + Gypsy12_LTR LTR Gypsy 85 799 -1537 9 693 3211 18 62 0 chrUextra 14247720 14248442 -14756214 - R1_DM LINE R1 -1544 3812 3046 9 693 4887 27 2 0 chrUextra 14248542 14249105 -14755551 - R1_DM LINE R1 -1659 3697 3134 9 693 1386 41 0 6 chrUextra 14249091 14249264 -14755392 - R1_DM LINE R1 -3063 2293 2122 9 693 703 75 0 0 chrUextra 14249364 14249457 -14755199 + ARS406_DM Unknown Unknown 97 189 -164 9 693 2603 203 65 20 chrUextra 14249376 14250085 -14754571 - SAR_DM Satellite Satellite -225 1247 507 9 693 6708 4 0 0 chrUextra 14250186 14250908 -14753748 - R2_DM LINE R2 -157 3450 2729 9 693 5531 18 3 57 chrUextra 14251008 14251730 -14752926 + BATUMI_I LTR Pao 2329 3011 -4952 9 693 5936 44 14 0 chrUextra 14251830 14252552 -14752104 + FW_DM LINE Jockey 191 922 -3770 9 693 321 151 65 52 chrUextra 14252652 14252729 -14751927 + DMCR1A LINE CR1 2203 2280 -2190 9 693 5488 9 13 16 chrUextra 14252738 14253374 -14751282 + DOC LINE Jockey 4 637 -4088 9 693 6496 11 1 3 chrUextra 14253474 14254196 -14750460 + Gypsy4_I LTR Gypsy 1757 2477 -3811 9 693 6186 33 0 0 chrUextra 14254296 14255018 -14749638 - R1_DM LINE R1 -2070 3286 2565 9 693 6578 1 0 0 chrUextra 14255118 14255840 -14748816 + R1_DM LINE R1 2562 3283 -2073 9 693 6464 11 0 7 chrUextra 14255940 14256662 -14747994 - CIRCE LINE Composite -1867 4489 3773 9 693 4979 5 0 0 chrUextra 14256762 14257316 -14747340 - DM176_I LTR Gypsy -666 5754 5201 9 693 1427 12 0 0 chrUextra 14257312 14257480 -14747176 - DM176_I LTR Gypsy -5167 1253 1086 9 693 3220 186 19 19 chrUextra 14257584 14258306 -14746350 - SAR_DM Satellite Satellite -321 1151 430 9 693 6311 8 0 0 chrUextra 14258406 14259128 -14745528 + DM297_I LTR Gypsy 4153 4874 -1293 9 693 393 266 28 50 chrUextra 14259229 14259411 -14745245 + CT-rich Low_complexity Low_complexity 1 178 0 9 693 2006 0 17 13 chrUextra 14260063 14260302 -14744354 - NTS_DM Other Other 0 240 1 9 693 1977 8 17 13 chrUextra 14260302 14260541 -14744115 - NTS_DM Other Other 0 240 1 9 693 1789 22 17 17 chrUextra 14260541 14260772 -14743884 - NTS_DM Other Other 0 240 10 9 693 28 29 0 0 chrUextra 14261475 14261510 -14743146 + AT_rich Low_complexity Low_complexity 1 35 0 9 693 1158 122 0 0 chrUextra 14261694 14262032 -14742624 + (TA)n Simple_repeat Simple_repeat 1 338 0 9 693 2957 41 0 11 chrUextra 14262033 14262404 -14742252 + ROVER-LTR_DM LTR Gypsy 1 367 0 9 693 1620 4 0 0 chrUextra 14262516 14262782 -14741874 + (CAAGA)n Simple_repeat Simple_repeat 1 266 0 9 693 2014 4 0 9 chrUextra 14262807 14263033 -14741623 - DIVER_LTR LTR Pao 0 224 1 9 693 1892 5 0 0 chrUextra 14263033 14263238 -14741418 - DIVER_I LTR Pao 0 5643 5439 9 693 6582 1 0 1 chrUextra 14263338 14264060 -14740596 - ROO_I LTR Pao -5178 3078 2358 9 693 385 341 26 31 chrUextra 14265016 14265418 -14739238 + BLASTOPIA_I LTR Gypsy 3541 4185 -703 9 693 3127 109 2 2 chrUextra 14267448 14267880 -14736776 - R1_DM LINE R1 -3817 1539 1108 9 693 1487 113 20 96 chrUextra 14267877 14268170 -14736486 - R1_DM LINE R1 -4646 710 440 9 693 6559 8 0 0 chrUextra 14268270 14268992 -14735664 + DOC2_DM LINE Jockey 2996 3717 -1076 9 693 6118 33 1 0 chrUextra 14269092 14269814 -14734842 + R1_DM LINE R1 2677 3399 -1957 9 693 660 214 0 0 chrUextra 14269918 14270063 -14734593 - ROVER-I_DM LTR Gypsy -450 6134 5990 9 693 3158 148 4 7 chrUextra 14270098 14270636 -14734020 - ROVER-I_DM LTR Gypsy -1276 5308 4773 9 693 2247 143 12 15 chrUextra 14270736 14271458 -14733198 + DMSAT6 Satellite Satellite 1 720 -74 9 693 6583 1 0 0 chrUextra 14271558 14272280 -14732376 + LSU-rRNA_Dme rRNA rRNA 370 1091 -2809 9 693 2236 186 11 7 chrUextra 14272380 14272394 -14732262 - SAR_DM Satellite Satellite -813 724 707 9 693 1464 58 0 0 chrUextra 14272394 14272583 -14732073 + ARS406_DM Unknown Unknown 1 189 -164 9 693 2236 186 11 7 chrUextra 14272583 14273102 -14731554 - SAR_DM Satellite Satellite -813 706 1 9 693 2856 27 0 0 chrUextra 14273209 14273545 -14731111 + FW_DM LINE Jockey 4353 4688 -4 9 693 2897 61 32 3 chrUextra 14273546 14273924 -14730732 - R1_DM LINE R1 -3966 1390 1002 9 693 2730 131 68 96 chrUextra 14274037 14274746 -14729910 + MAX_I LTR Pao 938 1626 -6288 9 693 6407 24 0 0 chrUextra 14274846 14275568 -14729088 - DIVER_I LTR Pao -2075 3568 2847 9 693 6089 0 3 7 chrUextra 14275668 14276390 -14728266 + DM412 LTR Gypsy 1052 1770 -5127 9 693 27 49 0 0 chrUextra 14276498 14276539 -14728117 + AT_rich Low_complexity Low_complexity 1 41 0 9 693 32 0 0 0 chrUextra 14276867 14276899 -14727757 + AT_rich Low_complexity Low_complexity 1 32 0 9 693 1683 0 0 0 chrUextra 14277031 14277212 -14727444 + SSU-rRNA_Dme rRNA rRNA 1 181 -1814 9 693 6705 1 0 3 chrUextra 14277312 14278034 -14726622 + LSU-rRNA_Dme rRNA rRNA 2632 3351 -549 9 693 1311 115 0 106 chrUextra 14278134 14278388 -14726268 + R1_DM LINE R1 450 676 -4680 9 693 3142 115 2 2 chrUextra 14278384 14278856 -14725800 + R1_DM LINE R1 1099 1570 -3786 9 693 926 0 0 0 chrUextra 14278956 14279065 -14725591 - I_DM LINE I -5785 446 338 9 693 235 235 20 0 chrUextra 14279262 14279313 -14725343 + (TATG)n Simple_repeat Simple_repeat 1 52 0 9 693 213 39 0 0 chrUextra 14279651 14279677 -14724979 + (ATG)n Simple_repeat Simple_repeat 3 28 0 9 693 6064 17 0 0 chrUextra 14279778 14280500 -14724156 + R1_DM LINE R1 1864 2585 -2771 9 693 237 108 0 0 chrUextra 14280750 14280787 -14723869 + (T)n Simple_repeat Simple_repeat 1 37 0 9 693 270 136 0 0 chrUextra 14280947 14280991 -14723665 + (CACCAT)n Simple_repeat Simple_repeat 4 47 0 9 693 3075 0 3 0 chrUextra 14281422 14281776 -14722880 + LSU-rRNA_Dme rRNA rRNA 3546 3900 0 9 693 22 56 0 0 chrUextra 14281848 14281884 -14722772 + AT_rich Low_complexity Low_complexity 1 36 0 9 693 246 150 0 0 chrUextra 14281889 14281929 -14722727 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 693 246 150 0 0 chrUextra 14281981 14282021 -14722635 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 693 6259 1 1 0 chrUextra 14282244 14282966 -14721690 + LSU-rRNA_Dme rRNA rRNA 2286 3008 -892 9 693 2336 73 7 43 chrUextra 14283068 14283788 -14720868 + DMSAT6 Satellite Satellite 1 694 -85 9 693 5748 15 4 8 chrUextra 14284710 14285432 -14719224 - ROO_I LTR Pao -4348 3908 3190 9 693 6178 4 1 0 chrUextra 14285532 14286254 -14718402 - R1_DM LINE R1 -302 5054 4332 9 86 5397 37 0 0 chrUextra 14286393 14287076 -14717580 - R1_DM LINE R1 -2388 2968 2286 9 694 5719 3 3 35 chrUextra 14287176 14287898 -14716758 + LSU-rRNA_Dme rRNA rRNA 91 789 -3111 9 694 5714 5 1 0 chrUextra 14287998 14288658 -14715998 + SSU-rRNA_Dme rRNA rRNA 1335 1995 0 9 694 548 16 0 0 chrUextra 14288820 14288884 -14715772 - NTS_DM Other Other -176 64 1 9 694 1408 20 20 20 chrUextra 14288884 14289087 -14715569 - NTS_DM Other Other 0 240 38 9 694 817 0 0 0 chrUextra 14289087 14289183 -14715473 - NTS_DM Other Other -107 133 38 9 694 813 19 9 27 chrUextra 14289183 14289294 -14715362 - NTS_DM Other Other -107 133 25 9 694 21 57 0 0 chrUextra 14289320 14289355 -14715301 + AT_rich Low_complexity Low_complexity 1 35 0 9 694 1234 24 0 6 chrUextra 14289355 14289520 -14715136 - NTS_DM Other Other -39 201 38 9 694 34 24 0 0 chrUextra 14289822 14289863 -14714793 + AT_rich Low_complexity Low_complexity 1 41 0 9 694 21 95 0 0 chrUextra 14290077 14290140 -14714516 + AT_rich Low_complexity Low_complexity 1 63 0 9 694 1842 0 0 0 chrUextra 14290152 14290364 -14714292 + LSU-rRNA_Dme rRNA rRNA 1 212 -3688 9 694 240 0 0 86 chrUextra 14290464 14290499 -14714157 - NTS_DM Other Other -184 56 25 9 694 22 56 0 0 chrUextra 14290524 14290560 -14714096 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 255 125 0 0 chrUextra 14290573 14290613 -14714043 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 694 246 150 0 0 chrUextra 14290749 14290789 -14713867 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 694 246 150 0 0 chrUextra 14290841 14290881 -14713775 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 694 22 56 0 0 chrUextra 14290886 14290922 -14713734 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 1664 5 0 0 chrUextra 14290994 14291186 -14713470 - LSU-rRNA_Dme rRNA rRNA 0 3900 3709 9 694 246 150 0 0 chrUextra 14291354 14291394 -14713262 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 246 150 0 0 chrUextra 14291446 14291486 -14713170 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 255 125 0 0 chrUextra 14291529 14291569 -14713087 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 22 56 0 0 chrUextra 14291582 14291618 -14713038 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 870 9 0 27 chrUextra 14291644 14291756 -14712900 + NTS_DM Other Other 25 133 -107 9 694 1252 18 0 6 chrUextra 14291756 14291921 -14712735 + NTS_DM Other Other 38 201 -39 9 694 240 0 0 86 chrUextra 14291973 14292008 -14712648 + NTS_DM Other Other 25 56 -184 9 694 1088 7 25 19 chrUextra 14292110 14292267 -14712389 + NTS_DM Other Other 83 240 0 9 694 1271 6 0 24 chrUextra 14292267 14292433 -14712223 + NTS_DM Other Other 1 162 -78 9 694 488 119 36 0 chrUextra 14292543 14292627 -14712029 + NTS_DM Other Other 4 90 -150 9 694 772 130 0 7 chrUextra 14292930 14293068 -14711588 + MDG1_LTR LTR Gypsy 276 412 -30 9 694 3726 84 21 9 chrUextra 14293068 14293644 -14711012 + MDG1_I LTR Gypsy 1 583 -6013 9 694 3019 179 7 7 chrUextra 14294577 14295265 -14709391 - SAR_DM Satellite Satellite -593 879 192 9 694 791 102 0 0 chrUextra 14295169 14295296 -14709360 + ARS406_DM Unknown Unknown 1 127 -226 9 694 6095 10 3 0 chrUextra 14295396 14296118 -14708538 + R1_DM LINE R1 56 779 -4577 9 694 4118 88 61 7 chrUextra 14296218 14296940 -14707716 - STALKER4_I LTR Gypsy -33 6497 5737 9 694 5428 1 5 6 chrUextra 14297109 14297762 -14706894 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1137 9 694 299 211 13 0 chrUextra 14297862 14297938 -14706718 - XDMR_DM Unknown Unknown -29 331 255 9 694 961 172 40 8 chrUextra 14297875 14298582 -14706074 + SAR_DM Satellite Satellite 1 729 -1040 9 694 3273 227 8 3 chrUextra 14298685 14299406 -14705250 + Gypsy2_I LTR Gypsy 5144 5868 -267 9 694 6200 0 4 1 chrUextra 14299509 14300228 -14704428 + SSU-rRNA_Dme rRNA rRNA 253 973 -1022 9 694 610 150 0 8 chrUextra 14300330 14300451 -14704205 - ARS406_DM Unknown Unknown -233 120 1 9 694 2265 202 13 10 chrUextra 14300353 14301050 -14703606 + SAR_DM Satellite Satellite 1 699 -645 9 694 5702 44 1 0 chrUextra 14301150 14301872 -14702784 + R1_DM LINE R1 1102 1824 -3532 9 694 357 189 0 0 chrUextra 14301972 14302067 -14702589 + T-rich Low_complexity Low_complexity 4 98 0 9 694 4804 68 2 3 chrUextra 14302802 14303513 -14701143 - BATUMI_I LTR Pao -1118 6796 5844 9 694 2434 188 50 44 chrUextra 14303616 14304338 -14700318 + TART LINE telomeric 8952 9562 -4915 9 694 1663 82 0 8 chrUextra 14305260 14305506 -14699150 + BATUMI_I LTR Pao 7720 7963 0 9 694 1560 45 4 43 chrUextra 14305532 14305765 -14698891 + BATUMI_LTR LTR Pao 49 272 0 9 694 1766 32 0 0 chrUextra 14305765 14305982 -14698674 + ROO_I LTR Pao 3513 3729 -4527 9 694 2259 104 14 15 chrUextra 14306904 14307626 -14697030 - DMSAT6 Satellite Satellite -86 720 1 9 694 3212 0 0 0 chrUextra 14307726 14308094 -14696562 + LSU-rRNA_Dme rRNA rRNA 2214 2581 -1319 9 694 3038 8 0 3 chrUextra 14308092 14308448 -14696208 + R2_DM LINE R2 3 357 -3250 9 694 3465 30 19 0 chrUextra 14309370 14309798 -14694858 + CIRCE LINE Composite 5921 6356 0 9 694 2413 27 0 0 chrUextra 14309798 14310092 -14694564 + CIRCE LINE Composite 1 294 -6062 9 694 2609 6 0 6 chrUextra 14310192 14310511 -14694145 - QUASIMODO_LTR LTR Gypsy -341 317 1 9 694 3185 2 0 0 chrUextra 14310511 14310914 -14693742 - QUASIMODO_I LTR Gypsy 0 6060 5658 9 694 5873 22 3 1 chrUextra 14311014 14311736 -14692920 - R1_DM LINE R1 -2807 2549 1827 9 694 229 0 0 0 chrUextra 14311836 14311862 -14692794 - R1_DM LINE R1 -129 5227 5202 9 694 2131 92 115 13 chrUextra 14311862 14312236 -14692420 - MDG1_LTR LTR Gypsy -30 412 1 9 694 1174 53 562 6 chrUextra 14312236 14312558 -14692098 - MDG1_I LTR Gypsy 0 6596 6096 9 694 765 72 79 7 chrUextra 14313480 14313620 -14691036 + TRANSIB2 DNA Transib 2071 2220 -624 9 694 1253 81 115 7 chrUextra 14313979 14314202 -14690454 + TRANSIB2 DNA Transib 2229 2444 -400 9 694 6254 7 0 0 chrUextra 14314302 14315024 -14689632 - DM1731_I LTR Copia -2355 1621 900 9 694 1441 5 25 15 chrUextra 14315124 14315322 -14689334 + NTS_DM Other Other 41 240 0 9 694 1861 0 17 13 chrUextra 14315322 14315561 -14689095 + NTS_DM Other Other 1 240 0 9 694 1861 0 17 13 chrUextra 14315561 14315800 -14688856 + NTS_DM Other Other 1 240 0 9 694 400 0 0 0 chrUextra 14315800 14315846 -14688810 + NTS_DM Other Other 1 46 -194 9 694 317 170 29 29 chrUextra 14315946 14316049 -14688607 + XDMR_DM Unknown Unknown 258 360 0 9 694 2713 183 14 27 chrUextra 14315963 14316666 -14687990 - SAR_DM Satellite Satellite -354 1118 425 9 694 1986 174 138 22 chrUextra 14316786 14317366 -14687290 - TART LINE telomeric -4946 9531 8521 9 694 5940 22 4 0 chrUextra 14317591 14318312 -14686344 + DMCR1A LINE CR1 2353 3076 -1394 9 694 1742 180 13 7 chrUextra 14318413 14319118 -14685538 + SAR_DM Satellite Satellite 1 708 -685 9 694 1001 58 0 0 chrUextra 14318995 14319134 -14685522 - ARS406_DM Unknown Unknown -164 189 51 9 694 1306 53 0 0 chrUextra 14319235 14319422 -14685234 - BATUMI_I LTR Pao -474 7489 7303 9 694 3833 34 8 12 chrUextra 14319445 14319956 -14684700 + BATUMI_I LTR Pao 6427 6935 -1028 9 694 674 107 0 0 chrUextra 14320056 14320168 -14684488 - ARS406_DM Unknown Unknown -241 112 1 9 694 3045 182 7 8 chrUextra 14320072 14320777 -14683879 + SAR_DM Satellite Satellite 192 895 -577 9 694 893 180 80 90 chrUextra 14321128 14321440 -14683216 + TIRANT_LTR LTR Gypsy 1 309 -108 9 694 5808 19 37 0 chrUextra 14321700 14322422 -14682234 - STALKER4_I LTR Gypsy -1549 4981 4233 9 694 3671 92 91 26 chrUextra 14322527 14323185 -14681471 - Gypsy12_I LTR Gypsy -4845 701 1 9 694 327 125 0 18 chrUextra 14323185 14323242 -14681414 - Gypsy12_LTR LTR Gypsy 0 2336 2281 9 694 21 89 0 0 chrUextra 14323409 14323465 -14681191 + AT_rich Low_complexity Low_complexity 1 56 0 9 694 5061 0 2 2 chrUextra 14323484 14324066 -14680590 - SSU-rRNA_Dme rRNA rRNA 0 1995 1414 9 694 262 54 0 0 chrUextra 14324166 14324203 -14680453 + PROTOP_B DNA P 1117 1153 0 9 694 21 89 0 0 chrUextra 14324741 14324797 -14679859 + AT_rich Low_complexity Low_complexity 1 56 0 9 694 476 14 53 40 chrUextra 14324988 14325064 -14679592 + NTS_DM Other Other 164 240 0 9 694 1128 8 0 0 chrUextra 14325064 14325197 -14679459 + NTS_DM Other Other 1 133 -107 9 694 1252 18 0 6 chrUextra 14325197 14325362 -14679294 + NTS_DM Other Other 38 201 -39 9 694 21 57 0 0 chrUextra 14325362 14325397 -14679259 + AT_rich Low_complexity Low_complexity 1 35 0 9 694 832 9 9 27 chrUextra 14325423 14325534 -14679122 + NTS_DM Other Other 25 133 -107 9 694 1268 24 0 12 chrUextra 14325534 14325705 -14678951 + NTS_DM Other Other 38 206 -34 9 694 2275 171 11 6 chrUextra 14326636 14327354 -14677302 + SAR_DM Satellite Satellite 1 721 -677 9 694 6028 3 0 3 chrUextra 14327454 14328173 -14676483 - G_DM LINE Jockey -1545 2801 2085 9 694 2680 164 24 77 chrUextra 14328276 14328995 -14675661 - SAR_DM Satellite Satellite -446 1026 346 9 694 3279 170 11 7 chrUextra 14329103 14329819 -14674837 + SAR_DM Satellite Satellite 326 1044 -428 9 694 6321 1 0 0 chrUextra 14329921 14330642 -14674014 - SSU-rRNA_Dme rRNA rRNA -867 1128 408 9 694 3185 168 10 7 chrUextra 14330742 14331432 -14673224 - SAR_DM Satellite Satellite -535 937 246 9 694 413 113 0 0 chrUextra 14331392 14331463 -14673193 + ARS406_DM Unknown Unknown 1 71 -282 9 694 5633 39 0 0 chrUextra 14331564 14332286 -14672370 + IDEFIX_I LTR Gypsy 914 1635 -3993 9 694 2948 188 13 16 chrUextra 14332386 14333107 -14671549 - SAR_DM Satellite Satellite -649 718 1 9 694 584 164 8 16 chrUextra 14333209 14333333 -14671323 - ARS406_DM Unknown Unknown -230 123 1 9 694 2887 199 24 9 chrUextra 14333229 14333925 -14670731 + SAR_DM Satellite Satellite 185 891 -581 9 694 2886 268 1 1 chrUextra 14334851 14335564 -14669092 + Gypsy6_I LTR Gypsy 5636 6348 -664 9 694 2463 28 0 0 chrUextra 14335697 14335983 -14668673 + Gypsy3_I LTR Gypsy 5892 6177 0 9 694 2373 88 43 79 chrUextra 14335983 14336390 -14668266 + Gypsy6A_LTR LTR Gypsy 1 420 0 9 694 1877 216 26 12 chrUextra 14336496 14337198 -14667458 + SAR_DM Satellite Satellite 1 711 -668 9 694 3023 181 49 4 chrUextra 14337313 14338025 -14666631 + SAR_DM Satellite Satellite 332 1075 -397 9 694 5516 24 3 15 chrUextra 14338133 14338854 -14665802 - DM176_I LTR Gypsy -5647 773 62 9 694 22 35 0 0 chrUextra 14339074 14339103 -14665553 + AT_rich Low_complexity Low_complexity 1 29 0 9 694 37 39 0 0 chrUextra 14339204 14339255 -14665401 + AT_rich Low_complexity Low_complexity 1 51 0 9 694 28 48 0 0 chrUextra 14339610 14339652 -14665004 + AT_rich Low_complexity Low_complexity 1 42 0 9 694 6179 14 1 0 chrUextra 14339775 14340496 -14664160 - Invader2_I LTR Gypsy -540 4052 3331 9 694 1889 46 4 0 chrUextra 14341080 14341317 -14663339 - DMCR1A LINE CR1 -2012 2458 2221 9 694 6612 0 0 0 chrUextra 14341419 14342138 -14662518 - MAX_I LTR Pao -1294 6620 5902 9 694 3392 178 6 7 chrUextra 14342251 14342959 -14661697 + SAR_DM Satellite Satellite 192 898 -574 9 694 6533 1 0 0 chrUextra 14343059 14343780 -14660876 - DM1731_I LTR Copia -1167 2809 2089 9 694 624 320 28 30 chrUextra 14343880 14344268 -14660388 + MICROPIA_I LTR Gypsy 350 719 -3380 9 694 2961 175 8 3 chrUextra 14344701 14345422 -14659234 + SAR_DM Satellite Satellite 1 724 -582 9 694 931 9 0 0 chrUextra 14345522 14345633 -14659023 - NTS_DM Other Other -92 148 38 9 694 881 18 0 27 chrUextra 14345633 14345745 -14658911 - NTS_DM Other Other -107 133 25 9 694 1304 18 0 6 chrUextra 14345797 14345962 -14658694 - NTS_DM Other Other -39 201 38 9 694 907 9 0 27 chrUextra 14345962 14346074 -14658582 - NTS_DM Other Other -107 133 25 9 694 22 56 0 0 chrUextra 14346100 14346136 -14658520 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 273 173 0 19 chrUextra 14346149 14346202 -14658454 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2569 9 694 6397 1 1 0 chrUextra 14346344 14347064 -14657592 - ROO_I LTR Pao -6349 1907 1187 9 694 3905 186 4 0 chrUextra 14347164 14347878 -14656778 + ROVER-I_DM LTR Gypsy 3726 4442 -2142 9 694 6479 1 1 0 chrUextra 14347985 14348706 -14655950 - Invader3_I LTR Gypsy -495 4393 3672 9 694 652 0 0 0 chrUextra 14348806 14348881 -14655775 + QUASIMODO_LTR LTR Gypsy 584 658 0 9 694 3040 6 88 0 chrUextra 14348881 14349527 -14655129 + QUASIMODO_I LTR Gypsy 1 703 -5357 9 694 1723 0 0 0 chrUextra 14349627 14349820 -14654836 - HMSBEAGLE_I LTR Gypsy -6336 193 1 9 694 2421 8 0 0 chrUextra 14349819 14350085 -14654571 - DMLTR5 LTR Gypsy 0 266 1 9 694 1158 123 0 0 chrUextra 14350085 14350345 -14654311 + (TA)n Simple_repeat Simple_repeat 1 260 0 9 694 22 56 0 0 chrUextra 14350544 14350580 -14654076 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 262 150 0 0 chrUextra 14350585 14350625 -14654031 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 262 150 0 0 chrUextra 14350677 14350717 -14653939 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 262 150 0 0 chrUextra 14350769 14350809 -14653847 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 269 125 0 0 chrUextra 14350852 14350892 -14653764 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 22 56 0 0 chrUextra 14350905 14350941 -14653715 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 886 18 0 27 chrUextra 14350967 14351079 -14653577 + NTS_DM Other Other 25 133 -107 9 694 771 0 11 0 chrUextra 14351079 14351169 -14653487 + NTS_DM Other Other 38 128 -112 9 694 6145 15 4 1 chrUextra 14352914 14353632 -14651024 - R1_DM LINE R1 -897 4459 3740 9 694 2370 0 4 4 chrUextra 14353732 14353998 -14650658 - LSU-rRNA_Dme rRNA rRNA -1847 2053 1788 9 694 3611 2 5 2 chrUextra 14354042 14354453 -14650203 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1377 9 694 3324 97 27 23 chrUextra 14354561 14355113 -14649543 - TART LINE telomeric -11181 3296 2777 9 694 521 141 39 163 chrUextra 14355120 14355273 -14649383 - TART LINE telomeric -11115 3362 3229 9 694 21 0 0 0 chrUextra 14355817 14355838 -14648818 + AT_rich Low_complexity Low_complexity 1 21 0 9 694 42 57 0 0 chrUextra 14356013 14356083 -14648573 + AT_rich Low_complexity Low_complexity 1 70 0 9 694 6402 1 3 4 chrUextra 14356195 14356916 -14647740 + LSU-rRNA_Dme rRNA rRNA 957 1676 -2224 9 694 2792 6 0 9 chrUextra 14357016 14357343 -14647313 + BATUMI_I LTR Pao 7640 7963 0 9 694 2087 42 3 34 chrUextra 14357343 14357635 -14647021 + BATUMI_I LTR Pao 7002 7284 -679 9 694 47 0 0 0 chrUextra 14358058 14358105 -14646551 + AT_rich Low_complexity Low_complexity 1 47 0 9 694 1827 23 0 65 chrUextra 14358121 14358400 -14646256 - Gypsy4_I LTR Gypsy -5911 377 117 9 694 1070 70 7 0 chrUextra 14358416 14358558 -14646098 - Gypsy4_LTR LTR Gypsy 0 287 145 9 694 3591 109 39 69 chrUextra 14358658 14359379 -14645277 + PROTOP_B DNA P 417 1115 -38 9 694 2446 258 14 14 chrUextra 14359480 14360185 -14644471 + ROVER-I_DM LTR Gypsy 2647 3351 -3233 9 694 3045 179 30 24 chrUextra 14360300 14361021 -14643635 + SAR_DM Satellite Satellite 198 923 -549 9 694 5494 3 40 6 chrUextra 14361121 14361842 -14642814 + MDG1_I LTR Gypsy 5812 6557 -39 9 694 3281 167 17 24 chrUextra 14361944 14362663 -14641993 + SAR_DM Satellite Satellite 274 987 -485 9 694 5092 104 28 0 chrUextra 14362763 14363484 -14641172 + Gypsy12_I LTR Gypsy 3209 3949 -1597 9 694 3835 0 0 0 chrUextra 14363584 14364005 -14640651 - DM1731_I LTR Copia -3555 421 1 9 694 2658 13 0 0 chrUextra 14364005 14364305 -14640351 - DM1731_LTR LTR Copia 0 336 37 9 694 3977 40 137 0 chrUextra 14364405 14365126 -14639530 + DMRT1B LINE R1 3552 4371 -812 9 694 5421 7 0 0 chrUextra 14365226 14365826 -14638830 - DOC LINE Jockey -4123 602 3 9 694 3034 175 31 21 chrUextra 14366047 14366766 -14637890 + SAR_DM Satellite Satellite 198 923 -549 9 694 1076 167 30 11 chrUextra 14366868 14367368 -14637288 - SAR_DM Satellite Satellite -842 722 116 9 694 514 197 8 0 chrUextra 14367368 14367485 -14637171 + ARS406_DM Unknown Unknown 1 118 -235 9 694 1076 167 30 11 chrUextra 14367485 14367578 -14637078 - SAR_DM Satellite Satellite -842 115 1 9 694 34 24 0 0 chrUextra 14367963 14368004 -14636652 + AT_rich Low_complexity Low_complexity 1 41 0 9 694 794 9 0 28 chrUextra 14368510 14368619 -14636037 + NTS_DM Other Other 57 162 -78 9 694 489 131 36 0 chrUextra 14368729 14368813 -14635843 + NTS_DM Other Other 4 90 -150 9 694 28 48 0 0 chrUextra 14369086 14369128 -14635528 + AT_rich Low_complexity Low_complexity 1 42 0 9 694 432 193 0 0 chrUextra 14369331 14369445 -14635211 + (AATAG)n Simple_repeat Simple_repeat 5 118 0 9 694 6143 29 11 0 chrUextra 14370152 14370873 -14633783 + R1_DM LINE R1 1336 2064 -3292 9 694 6245 10 0 0 chrUextra 14370973 14371694 -14632962 - QUASIMODO_I LTR Gypsy -2432 3628 2908 9 694 5755 22 1 0 chrUextra 14371794 14372465 -14632191 + FW_DM LINE Jockey 3162 3833 -859 9 694 364 0 0 0 chrUextra 14372469 14372515 -14632141 + FW_DM LINE Jockey 4138 4183 -509 9 694 494 133 0 0 chrUextra 14372617 14372707 -14631949 + ARS406_DM Unknown Unknown 22 111 -242 9 694 2462 76 32 20 chrUextra 14372707 14373123 -14631533 + Gypsy6A_LTR LTR Gypsy 1 420 0 9 694 949 162 15 5 chrUextra 14373129 14373327 -14631329 - SAR_DM Satellite Satellite -581 891 692 9 694 5310 41 0 5 chrUextra 14373446 14374108 -14630548 - BATUMI_I LTR Pao 0 7963 7305 9 694 6278 3 7 8 chrUextra 14374257 14374976 -14629680 - DMRT1B LINE R1 -2293 2890 2173 9 694 6210 7 0 0 chrUextra 14375101 14375799 -14628857 + Invader2_I LTR Gypsy 620 1317 -3275 9 694 6127 14 39 3 chrUextra 14375899 14376620 -14628036 - R1_DM LINE R1 -611 4745 3999 9 694 1345 0 0 0 chrUextra 14377541 14377691 -14626965 - GTWIN_I LTR Gypsy -6271 150 1 9 694 4542 0 0 0 chrUextra 14377691 14378186 -14626470 - GTWIN_LTR LTR Gypsy 0 495 1 9 694 681 13 0 0 chrUextra 14378186 14378262 -14626394 - GTWIN_I LTR Gypsy 0 6421 6346 9 694 6397 1 0 0 chrUextra 14378362 14379083 -14625573 - LSU-rRNA_Dme rRNA rRNA -2807 1093 373 9 694 1566 273 32 63 chrUextra 14379192 14379875 -14624781 - Gypsy12_LTR LTR Gypsy -1258 1078 417 9 694 6255 0 4 0 chrUextra 14380004 14380723 -14623933 + ROO_I LTR Pao 4339 5060 -3196 9 694 1078 163 64 5 chrUextra 14380919 14381122 -14623534 + DNAREP1_DM LINE Penelope 22 236 -358 9 694 21 57 0 0 chrUextra 14381163 14381198 -14623458 + AT_rich Low_complexity Low_complexity 1 35 0 9 694 427 224 0 30 chrUextra 14381647 14381748 -14622908 + TIRANT_I LTR Gypsy 7595 7692 0 9 694 1239 92 0 6 chrUextra 14382191 14382366 -14622290 + Gypsy10_LTR LTR Gypsy 163 336 -28 9 694 4846 60 3 3 chrUextra 14382468 14383085 -14621571 + R1_DM LINE R1 1 617 -4739 9 694 788 30 10 19 chrUextra 14383084 14383187 -14621469 + R1_DM LINE R1 1101 1202 -4154 9 694 6465 4 0 3 chrUextra 14383289 14384009 -14620647 - Invader1_I LTR Gypsy -626 2560 1843 9 694 6094 0 46 0 chrUextra 14384109 14384830 -14619826 - ROO_I LTR Pao -7434 822 69 9 694 3089 184 12 11 chrUextra 14384930 14385648 -14619008 - SAR_DM Satellite Satellite -555 917 199 9 694 1107 23 0 0 chrUextra 14385751 14385881 -14618775 + CIRCE LINE Composite 4851 4980 -1376 9 694 1785 26 9 13 chrUextra 14386238 14386471 -14618185 + CIRCE LINE Composite 4981 5212 -1144 9 694 6596 1 1 0 chrUextra 14386572 14387293 -14617363 - LSU-rRNA_Dme rRNA rRNA -195 3705 2984 9 694 1620 12 0 0 chrUextra 14387394 14387826 -14616830 + (TTCTC)n Simple_repeat Simple_repeat 1 432 0 9 694 432 86 0 0 chrUextra 14387841 14387911 -14616745 + (GAGAA)n Simple_repeat Simple_repeat 3 72 0 9 694 1208 61 0 6 chrUextra 14387934 14388114 -14616542 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 9 694 3281 177 14 11 chrUextra 14388214 14388935 -14615721 + SAR_DM Satellite Satellite 262 984 -488 9 694 1140 312 10 12 chrUextra 14389035 14389515 -14615141 - Invader6_I LTR Gypsy -2195 1904 1426 9 694 833 71 79 0 chrUextra 14389513 14389639 -14615017 + Gypsy7_I LTR Gypsy 3199 3334 -1650 9 694 863 43 17 0 chrUextra 14389640 14389756 -14614900 + Gypsy7_I LTR Gypsy 3615 3732 -1252 9 694 1594 191 81 29 chrUextra 14390096 14390577 -14614079 + STALKER4_I LTR Gypsy 885 1390 -5140 9 694 6170 0 3 0 chrUextra 14390677 14391398 -14613258 + FW_DM LINE Jockey 2859 3581 -1111 9 694 6116 0 0 0 chrUextra 14391503 14392219 -14612437 + BLOOD_I LTR Gypsy 2413 3128 -3485 9 694 6113 4 28 0 chrUextra 14392319 14393040 -14611616 - FW_DM LINE Jockey -447 4245 3505 9 694 615 13 13 0 chrUextra 14393140 14393215 -14611441 - NTS_DM Other Other -164 76 1 9 694 1756 17 17 17 chrUextra 14393215 14393455 -14611201 - NTS_DM Other Other 0 240 1 9 694 1756 17 17 17 chrUextra 14393455 14393695 -14610961 - NTS_DM Other Other 0 240 1 9 694 1002 25 36 24 chrUextra 14393695 14393861 -14610795 - NTS_DM Other Other 0 240 73 9 694 3745 23 8 19 chrUextra 14393961 14394441 -14610215 - CIRCE LINE Composite -3994 2362 1888 9 694 579 296 42 57 chrUextra 14394106 14394508 -14610148 - Gypsy12_I LTR Gypsy -1316 4230 3835 9 694 1337 30 0 0 chrUextra 14394517 14394682 -14609974 - CIRCE LINE Composite -4474 1882 1718 9 694 28 48 0 0 chrUextra 14395619 14395661 -14608995 + AT_rich Low_complexity Low_complexity 1 42 0 9 694 488 119 36 0 chrUextra 14395934 14396018 -14608638 - NTS_DM Other Other -150 90 4 9 694 1264 6 6 18 chrUextra 14396128 14396292 -14608364 - NTS_DM Other Other -78 162 1 9 694 6158 3 0 0 chrUextra 14396424 14397145 -14607511 + QUASIMODO_I LTR Gypsy 1870 2590 -3470 9 694 5726 24 40 1 chrUextra 14397245 14397966 -14606690 + Gypsy4_I LTR Gypsy 1154 1902 -4386 9 694 5708 21 76 0 chrUextra 14398066 14398787 -14605869 - R1_DM LINE R1 -7 5349 4574 9 694 322 178 50 101 chrUextra 14398994 14399113 -14605543 - Copia_I LTR Copia -80 4513 4401 9 694 22 56 0 0 chrUextra 14399158 14399194 -14605462 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 1163 190 58 8 chrUextra 14399348 14399608 -14605048 + HETA LINE telomeric 4031 4303 -1778 9 694 5466 50 1 1 chrUextra 14399708 14400429 -14604227 - IVK_DM LINE I -2376 3026 2306 9 694 1871 0 0 0 chrUextra 14400529 14400748 -14603908 - HMSBEAGLE_I LTR Gypsy -6310 219 1 9 694 2316 8 0 0 chrUextra 14400747 14401013 -14603643 - DMLTR5 LTR Gypsy 0 266 1 9 694 2040 0 0 0 chrUextra 14401013 14401250 -14603406 + SSU-rRNA_Dme rRNA rRNA 700 936 -1059 9 694 3178 164 22 7 chrUextra 14401350 14402043 -14602613 + SAR_DM Satellite Satellite 374 1076 -396 9 694 5779 36 0 0 chrUextra 14402171 14402892 -14601764 - R1_DM LINE R1 -1965 3391 2671 9 694 6161 0 1 1 chrUextra 14402992 14403713 -14600943 - R1_DM LINE R1 -3157 2199 1479 9 694 2833 242 6 3 chrUextra 14403813 14404534 -14600122 + TABOR_I LTR Gypsy 3809 4531 -1805 9 694 6126 7 7 3 chrUextra 14404634 14405355 -14599301 - TART_B1 LINE telomeric -2069 8585 7862 9 694 790 70 9 0 chrUextra 14405455 14405569 -14599087 - R1_DM LINE R1 -5218 138 24 9 694 4675 23 2 0 chrUextra 14405605 14406176 -14598480 - R1_DM LINE R1 -2 5354 4783 9 694 267 53 0 17 chrUextra 14406281 14406339 -14598317 - NTS_DM Other Other -76 164 108 9 694 802 115 0 0 chrUextra 14406347 14406477 -14598179 - NTS_DM Other Other -103 137 8 9 694 259 146 21 0 chrUextra 14406575 14406623 -14598033 - NTS_DM Other Other -191 49 1 9 694 965 149 20 5 chrUextra 14406654 14406856 -14597800 - NTS_DM Other Other -35 205 1 9 694 2090 169 11 4 chrUextra 14407097 14407550 -14597106 - SAR_DM Satellite Satellite -683 789 334 9 694 2026 8 0 19 chrUextra 14407550 14407818 -14596838 - DOC LINE Jockey -3 4722 4460 9 694 3429 232 11 32 chrUextra 14407920 14409460 -14595196 - SAR_DM Satellite Satellite -414 1507 1 9 694 5787 23 1 0 chrUextra 14409560 14410262 -14594394 + R1_DM LINE R1 4654 5356 0 9 694 3050 183 8 8 chrUextra 14410381 14411102 -14593554 - SAR_DM Satellite Satellite -515 957 237 9 694 1320 21 30 20 chrUextra 14411202 14411399 -14593257 + NTS_DM Other Other 42 240 0 9 694 843 6 365 17 chrUextra 14411399 14411577 -14593079 + NTS_DM Other Other 1 240 0 9 694 1756 17 17 17 chrUextra 14411577 14411817 -14592839 + NTS_DM Other Other 1 240 0 9 694 861 28 0 0 chrUextra 14411817 14411923 -14592733 + NTS_DM Other Other 1 106 -134 9 694 2862 141 26 4 chrUextra 14412029 14412644 -14592012 - BS3_DM LINE Jockey -1374 416 1 9 694 263 196 30 20 chrUextra 14412645 14412744 -14591912 - MDG1_LTR LTR Gypsy -30 412 313 9 694 2937 176 13 20 chrUextra 14412844 14413547 -14591109 + SAR_DM Satellite Satellite 421 1118 -354 9 694 355 192 30 10 chrUextra 14413465 14413565 -14591091 - XDMR_DM Unknown Unknown 0 360 259 9 694 3166 174 10 11 chrUextra 14413665 14414386 -14590270 - SAR_DM Satellite Satellite -486 986 267 9 694 752 266 89 37 chrUextra 14414487 14414995 -14589661 - QUASIMODO_I LTR Gypsy 0 6060 5527 9 694 1506 45 41 0 chrUextra 14414987 14415207 -14589449 + PROTOP_B DNA P 176 404 -749 9 694 3426 71 4 4 chrUextra 14415307 14415786 -14588870 - R1_DM LINE R1 -4877 479 1 9 694 1740 19 0 0 chrUextra 14415821 14416028 -14588628 - R1_DM LINE R1 -2 5354 5148 9 694 3074 176 14 12 chrUextra 14416128 14416849 -14587807 - SAR_DM Satellite Satellite -447 1025 304 9 694 1014 17 0 0 chrUextra 14417550 14417670 -14586986 + (TTCTC)n Simple_repeat Simple_repeat 5 124 0 9 695 29 28 0 0 chrUextra 14418455 14418491 -14586165 + AT_rich Low_complexity Low_complexity 1 36 0 9 695 5927 21 0 4 chrUextra 14418592 14419312 -14585344 - Gypsy4_I LTR Gypsy -5103 1185 469 9 695 504 188 0 0 chrUextra 14420002 14420130 -14584526 + (CTATT)n Simple_repeat Simple_repeat 2 129 0 9 695 1620 4 0 0 chrUextra 14420233 14420508 -14584148 + (CACAA)n Simple_repeat Simple_repeat 1 275 0 9 695 3276 7 0 77 chrUextra 14420511 14420954 -14583702 - DM412B_LTR LTR Gypsy -89 482 74 9 695 6206 1 0 1 chrUextra 14421054 14421775 -14582881 + FW_DM LINE Jockey 1945 2664 -2028 9 695 5921 24 0 0 chrUextra 14421875 14422596 -14582060 - R1_DM LINE R1 -2324 3032 2312 9 695 917 82 8 19 chrUextra 14422696 14423417 -14581239 + RSP Satellite Satellite 1 713 0 9 695 6171 0 1 0 chrUextra 14423517 14424238 -14580418 + ROO_I LTR Pao 1847 2568 -5688 9 695 6035 14 0 4 chrUextra 14424338 14425059 -14579597 - Gypsy4_I LTR Gypsy -5125 1163 446 9 695 374 307 0 0 chrUextra 14425190 14425317 -14579339 + MICROPIA_I LTR Gypsy 3668 3794 -682 9 695 314 299 101 9 chrUextra 14425403 14425616 -14579040 + MICROPIA_I LTR Gypsy 3434 3850 -626 9 695 323 183 96 0 chrUextra 14425702 14425806 -14578850 - PROTOP DNA P -232 4248 4135 9 695 23 0 0 0 chrUextra 14425838 14425861 -14578795 + AT_rich Low_complexity Low_complexity 1 23 0 9 695 5937 10 0 1 chrUextra 14425980 14426701 -14577955 + ROO_I LTR Pao 2739 3458 -4798 9 695 4730 54 3 54 chrUextra 14426801 14427522 -14577134 + BATUMI_I LTR Pao 2512 3195 -4768 9 695 6193 0 0 0 chrUextra 14427622 14428343 -14576313 + ROO_I LTR Pao 6675 7395 -861 9 695 6118 3 1 4 chrUextra 14428445 14429164 -14575492 - LSU-rRNA_Dme rRNA rRNA -2328 1572 856 9 695 6172 1 0 3 chrUextra 14429264 14429985 -14574671 - STALKER4_I LTR Gypsy -2298 4232 3514 9 695 3048 182 8 8 chrUextra 14430097 14430806 -14573850 + SAR_DM Satellite Satellite 209 917 -555 9 695 459 169 0 11 chrUextra 14430906 14430996 -14573660 - HETRP_DM Satellite Satellite -255 1617 1529 9 695 655 186 7 14 chrUextra 14431136 14431278 -14573378 - HETRP_DM Satellite Satellite -203 1669 1529 9 695 593 207 7 14 chrUextra 14431413 14431555 -14573101 - HETRP_DM Satellite Satellite -203 1669 1529 9 695 3639 28 56 0 chrUextra 14431727 14432330 -14572326 - R1_DM LINE R1 -2326 3030 2394 9 695 966 17 0 0 chrUextra 14432332 14432448 -14572208 - R1_DM LINE R1 -3291 2065 1950 9 695 2962 185 8 13 chrUextra 14432551 14433263 -14571393 - SAR_DM Satellite Satellite -569 903 195 9 695 6173 1 0 0 chrUextra 14433369 14434090 -14570566 - DMRT1B LINE R1 -3364 1819 1099 9 695 709 239 107 11 chrUextra 14434383 14434654 -14570002 + BS LINE Jockey 3142 3438 -1688 9 695 793 173 72 20 chrUextra 14434713 14434908 -14569748 - DMCR1A LINE CR1 -2065 2405 2201 9 695 5861 28 0 0 chrUextra 14435832 14436553 -14568103 - R1_DM LINE R1 -2522 2834 2114 9 695 5970 18 0 1 chrUextra 14436653 14437374 -14567282 - DOC2_DM LINE Jockey -169 4624 3905 9 695 2927 201 15 20 chrUextra 14437474 14438193 -14566463 - SAR_DM Satellite Satellite -626 714 1 9 695 1874 178 92 36 chrUextra 14438295 14439014 -14565642 + HETA LINE telomeric 4928 5394 -687 9 695 662 200 6 19 chrUextra 14439242 14439400 -14565256 - HETRP_DM Satellite Satellite -188 1684 1529 9 695 491 208 8 16 chrUextra 14439563 14439685 -14564971 - HETRP_DM Satellite Satellite -203 1669 1549 9 695 192 40 0 0 chrUextra 14439685 14439710 -14564946 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 695 5853 26 4 0 chrUextra 14439937 14440658 -14563998 - FW_DM LINE Jockey -990 3702 2979 9 695 5009 0 2 0 chrUextra 14440758 14441339 -14563317 - BARI_DM DNA Tc1 -1143 585 4 9 695 1204 0 0 0 chrUextra 14441339 14441479 -14563177 - BARI_DM DNA Tc1 -1 1727 1588 9 695 423 87 0 0 chrUextra 14441581 14441650 -14563006 + (CATGT)n Simple_repeat Simple_repeat 3 71 0 9 695 1092 89 0 0 chrUextra 14441658 14441838 -14562818 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 9 695 1585 97 8 46 chrUextra 14441857 14442300 -14562356 - Gypsy12_I LTR Gypsy -4688 858 375 9 695 6044 6 1 1 chrUextra 14442400 14443121 -14561535 + MDG3_I LTR Gypsy 2897 3617 -1369 9 695 5898 25 0 0 chrUextra 14443221 14443942 -14560714 - R1_DM LINE R1 -2193 3163 2443 9 695 40 21 0 0 chrUextra 14444232 14444279 -14560377 + AT_rich Low_complexity Low_complexity 1 47 0 9 695 652 104 0 0 chrUextra 14444295 14444391 -14560265 + ACCORD2_I LTR Gypsy 1272 1367 -5845 9 695 1259 105 101 42 chrUextra 14444475 14444763 -14559893 + ACCORD2_I LTR Gypsy 1505 1809 -5403 9 695 3046 246 0 0 chrUextra 14444863 14445584 -14559072 - Gypsy6_I LTR Gypsy -3250 3762 3042 9 695 4761 4 0 0 chrUextra 14445684 14446228 -14558428 - R2_DM LINE R2 -10 3597 3054 9 695 1519 0 0 0 chrUextra 14446232 14446405 -14558251 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2409 9 695 6249 1 0 0 chrUextra 14446505 14447226 -14557430 - DMRT1B LINE R1 -941 4242 3522 9 695 4516 39 18 72 chrUextra 14447326 14448047 -14556609 + BATUMI_I LTR Pao 763 1444 -6519 9 695 212 156 76 25 chrUextra 14448972 14449051 -14555605 + (CATATA)n Simple_repeat Simple_repeat 3 85 0 9 695 3339 56 33 73 chrUextra 14449055 14449689 -14554967 + BATUMI_I LTR Pao 593 1201 -6762 9 695 345 292 0 0 chrUextra 14450325 14450431 -14554225 + Copia2_I LTR Copia 567 672 -3490 9 695 5419 42 42 15 chrUextra 14450610 14451331 -14553325 + DMCR1A LINE CR1 918 1657 -2813 9 695 5507 36 4 10 chrUextra 14451431 14452152 -14552504 + BATUMI_I LTR Pao 3151 3867 -4096 9 695 2003 160 87 0 chrUextra 14452263 14452644 -14552012 - DMRT1B LINE R1 -802 4381 3968 9 695 2332 44 0 15 chrUextra 14452647 14452973 -14551683 + TRANSIB2 DNA Transib 10 330 -2514 9 695 2819 179 37 12 chrUextra 14453076 14453759 -14550897 - SAR_DM Satellite Satellite -581 891 192 9 695 803 107 0 0 chrUextra 14453663 14453794 -14550862 + ARS406_DM Unknown Unknown 1 131 -222 9 695 869 226 237 11 chrUextra 14453898 14454248 -14550408 - BS LINE Jockey -2677 2449 2021 9 695 963 124 0 34 chrUextra 14454409 14454584 -14550072 + DIVER_LTR LTR Pao 1 169 -55 9 695 1461 41 31 0 chrUextra 14454715 14454910 -14549746 - BLOOD_I LTR Gypsy -6412 201 1 9 695 1884 39 8 45 chrUextra 14455027 14455293 -14549363 - BLOOD_LTR LTR Gypsy -143 256 1 9 695 1113 35 28 0 chrUextra 14455293 14455436 -14549220 + R1_DM LINE R1 3260 3406 -1950 9 695 1642 23 13 18 chrUextra 14455539 14455764 -14548892 - NTS_DM Other Other -16 224 1 9 695 1438 15 20 20 chrUextra 14455764 14455967 -14548689 - NTS_DM Other Other 0 240 38 9 695 832 9 9 27 chrUextra 14455967 14456078 -14548578 - NTS_DM Other Other -107 133 25 9 695 21 57 0 0 chrUextra 14456104 14456139 -14548517 + AT_rich Low_complexity Low_complexity 1 35 0 9 695 737 36 0 9 chrUextra 14456139 14456251 -14548405 - NTS_DM Other Other -39 201 91 9 695 845 294 72 40 chrUextra 14456459 14457055 -14547601 + Copia2_I LTR Copia 973 1587 -2575 9 695 488 119 36 0 chrUextra 14457198 14457282 -14547374 - NTS_DM Other Other -150 90 4 9 695 1290 6 0 18 chrUextra 14457393 14457558 -14547098 - NTS_DM Other Other -78 162 1 9 695 1831 8 17 13 chrUextra 14457558 14457797 -14546859 - NTS_DM Other Other 0 240 1 9 695 682 0 39 29 chrUextra 14457797 14457899 -14546757 - NTS_DM Other Other 0 240 138 9 695 640 139 47 0 chrUextra 14458007 14458136 -14546520 - FB4_DM DNA Tc1 -3322 767 633 9 695 813 56 149 82 chrUextra 14458039 14458233 -14546423 + FB4_DM DNA Tc1 3847 4053 -36 9 695 26 64 0 0 chrUextra 14458613 14458660 -14545996 + AT_rich Low_complexity Low_complexity 1 47 0 9 695 277 133 0 22 chrUextra 14458671 14458717 -14545939 - DNAREP1_DM LINE Penelope -110 484 440 9 695 383 260 82 39 chrUextra 14458915 14459147 -14545509 + Copia_I LTR Copia 3486 3727 -866 9 695 661 260 107 42 chrUextra 14459158 14459540 -14545116 + Copia_I LTR Copia 3819 4225 -368 9 695 942 107 0 128 chrUextra 14459641 14459844 -14544812 - R1_DM LINE R1 -4606 750 574 9 695 982 102 29 29 chrUextra 14459845 14460017 -14544639 - R1_DM LINE R1 -5184 172 1 9 695 1989 57 3 35 chrUextra 14460035 14460324 -14544332 + Gypsy6A_LTR LTR Gypsy 71 350 -70 9 695 5425 31 20 11 chrUextra 14460470 14461179 -14543477 + BATUMI_I LTR Pao 1395 2109 -5854 9 695 6190 0 0 0 chrUextra 14461283 14462004 -14542652 + DOC LINE Jockey 442 1162 -3563 9 695 5683 7 15 1 chrUextra 14462104 14462825 -14541831 - QUASIMODO_I LTR Gypsy -583 5477 4747 9 695 198 0 0 0 chrUextra 14462939 14462961 -14541695 + (CA)n Simple_repeat Simple_repeat 1 22 0 9 695 5648 32 14 0 chrUextra 14463746 14464467 -14540189 + IDEFIX_I LTR Gypsy 1453 2183 -3445 9 695 3337 2 0 8 chrUextra 14464567 14464966 -14539690 + Gypsy4_I LTR Gypsy 4932 5327 -961 9 695 2339 7 0 0 chrUextra 14465009 14465288 -14539368 + Gypsy4_I LTR Gypsy 5316 5594 -694 9 695 2031 169 8 7 chrUextra 14465389 14466109 -14538547 - SAR_DM Satellite Satellite -610 720 1 9 695 5867 21 1 1 chrUextra 14466209 14466930 -14537726 - NINJA_I LTR Pao -449 5562 4842 9 695 5229 56 1 4 chrUextra 14467030 14467751 -14536905 - STALKER4_I LTR Gypsy -1130 5400 4682 9 695 3188 170 10 9 chrUextra 14467851 14468546 -14536110 + SAR_DM Satellite Satellite 381 1076 -396 9 695 1069 0 0 0 chrUextra 14469269 14469391 -14535265 - SSU-rRNA_Dme rRNA rRNA 0 1995 1874 9 695 3257 170 8 8 chrUextra 14469496 14470206 -14534450 + SAR_DM Satellite Satellite 352 1061 -411 9 695 32 0 0 0 chrUextra 14470464 14470496 -14534160 + AT_rich Low_complexity Low_complexity 1 32 0 9 695 3520 5 0 0 chrUextra 14470628 14471031 -14533625 + SSU-rRNA_Dme rRNA rRNA 1 403 -1592 9 695 881 43 0 0 chrUextra 14471134 14471250 -14533406 - BATUMI_I LTR Pao -1421 6542 6427 9 695 4117 64 16 2 chrUextra 14471273 14471851 -14532805 + BATUMI_I LTR Pao 7303 7888 -75 9 695 2932 9 0 0 chrUextra 14471951 14472288 -14532368 - Invader1_I LTR Gypsy -2849 337 1 9 695 3285 8 3 0 chrUextra 14472288 14472671 -14531985 - Invader1_LTR LTR Gypsy 0 423 40 9 695 746 96 9 0 chrUextra 14472774 14472889 -14531767 - DNAREP1_DM LINE Penelope -478 116 1 9 695 5954 25 0 0 chrUextra 14473591 14474311 -14530345 - R1_DM LINE R1 -585 4771 4052 9 695 366 39 39 0 chrUextra 14474411 14474462 -14530194 - NTS_DM Other Other -187 53 1 9 695 1408 20 20 20 chrUextra 14474462 14474665 -14529991 - NTS_DM Other Other 0 240 38 9 695 817 0 0 0 chrUextra 14474665 14474761 -14529895 - NTS_DM Other Other -107 133 38 9 695 832 9 9 27 chrUextra 14474761 14474872 -14529784 - NTS_DM Other Other -107 133 25 9 695 21 57 0 0 chrUextra 14474898 14474933 -14529723 + AT_rich Low_complexity Low_complexity 1 35 0 9 695 1252 18 0 6 chrUextra 14474933 14475098 -14529558 - NTS_DM Other Other -39 201 38 9 695 4463 23 7 10 chrUextra 14475231 14475808 -14528848 - BATUMI_I LTR Pao -962 7001 6427 9 695 881 33 0 0 chrUextra 14475831 14475951 -14528705 + BATUMI_I LTR Pao 7303 7422 -541 9 695 6021 1 0 1 chrUextra 14476051 14476771 -14527885 - ROO_I LTR Pao -4613 3643 2925 9 695 935 292 28 28 chrUextra 14477060 14477533 -14527123 + Copia2_I LTR Copia 1386 1920 -2242 9 695 1496 0 0 0 chrUextra 14477691 14477861 -14526795 + LSU-rRNA_Dme rRNA rRNA 3731 3900 0 9 695 27 29 0 0 chrUextra 14477933 14477967 -14526689 + AT_rich Low_complexity Low_complexity 1 34 0 9 695 22 56 0 0 chrUextra 14478031 14478067 -14526589 + AT_rich Low_complexity Low_complexity 1 36 0 9 695 27 29 0 0 chrUextra 14478131 14478165 -14526491 + AT_rich Low_complexity Low_complexity 1 34 0 9 695 246 150 0 0 chrUextra 14478170 14478210 -14526446 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 695 246 150 0 0 chrUextra 14478361 14478401 -14526255 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 695 2125 85 0 10 chrUextra 14478511 14478809 -14525847 + Gypsy12_I LTR Gypsy 5252 5546 0 9 695 1715 201 17 20 chrUextra 14478822 14479227 -14525429 + Gypsy12_LTR LTR Gypsy 13 416 -1920 9 695 3074 177 18 8 chrUextra 14480151 14480868 -14523788 - SAR_DM Satellite Satellite -397 1075 352 9 695 6155 4 0 0 chrUextra 14480971 14481691 -14522965 - STALKER4_I LTR Gypsy -2378 4152 3433 9 695 3152 168 19 7 chrUextra 14481803 14482503 -14522153 - SAR_DM Satellite Satellite -396 1076 369 9 695 5927 6 0 0 chrUextra 14482637 14483331 -14521325 - DMRT1B LINE R1 -114 5069 4376 9 695 2444 260 46 4 chrUextra 14483431 14484146 -14520510 + Gypsy6_I LTR Gypsy 4090 4834 -2178 9 695 5144 63 18 3 chrUextra 14484251 14484971 -14519685 + QUASIMODO_I LTR Gypsy 150 880 -5180 9 695 1314 0 27 16 chrUextra 14485071 14485255 -14519401 + NTS_DM Other Other 55 240 0 9 695 1301 6 0 18 chrUextra 14485255 14485420 -14519236 + NTS_DM Other Other 1 162 -78 9 695 488 119 36 0 chrUextra 14485530 14485614 -14519042 + NTS_DM Other Other 4 90 -150 9 695 2597 187 71 12 chrUextra 14485891 14486611 -14518045 + SAR_DM Satellite Satellite 256 1017 -455 9 695 1872 287 8 8 chrUextra 14486770 14487431 -14517225 - FROGGER_I LTR Copia -311 1766 1106 9 695 229 108 0 0 chrUextra 14487669 14487706 -14516950 - DNAREP1_DM LINE Penelope -2 592 556 9 695 740 143 66 44 chrUextra 14487699 14487882 -14516774 - DNAREP1_DM LINE Penelope -401 193 7 9 695 25 0 0 0 chrUextra 14487928 14487953 -14516703 + AT_rich Low_complexity Low_complexity 1 25 0 9 695 313 88 263 0 chrUextra 14488000 14488057 -14516599 - DNAREP1_DM LINE Penelope -519 75 4 9 695 966 8 83 0 chrUextra 14488126 14488246 -14516410 - PROTOP_A DNA P 0 1105 976 9 695 445 195 0 17 chrUextra 14488351 14488466 -14516190 + XDMR_DM Unknown Unknown 248 360 0 9 695 2691 196 6 20 chrUextra 14488380 14489071 -14515585 - SAR_DM Satellite Satellite -354 1118 438 9 695 420 68 0 0 chrUextra 14489580 14489639 -14515017 + BARI1 DNA Tc1 37 95 -1655 9 695 1166 113 44 84 chrUextra 14489641 14489891 -14514765 - Gypsy12A_LTR LTR Gypsy -1605 675 436 9 695 1362 6 0 6 chrUextra 14489991 14490160 -14514496 - NTS_DM Other Other -72 168 1 9 695 1070 20 245 20 chrUextra 14490160 14490356 -14514300 - NTS_DM Other Other 0 240 1 9 695 1679 25 21 17 chrUextra 14490356 14490595 -14514061 - NTS_DM Other Other 0 240 1 9 695 674 27 35 35 chrUextra 14490595 14490711 -14513945 - NTS_DM Other Other 0 240 125 9 695 2628 73 145 3 chrUextra 14490823 14491530 -14513126 + TART_B1 LINE telomeric 2399 3206 -7448 9 695 6043 7 15 0 chrUextra 14492451 14493171 -14511485 + DOC2_DM LINE Jockey 2012 2742 -2051 9 695 21 95 0 0 chrUextra 14493375 14493438 -14511218 + AT_rich Low_complexity Low_complexity 1 63 0 9 695 4232 2 2 46 chrUextra 14493450 14493991 -14510665 + LSU-rRNA_Dme rRNA rRNA 1 517 -3383 9 695 6225 0 1 3 chrUextra 14494092 14494811 -14509845 + SSU-rRNA_Dme rRNA rRNA 1184 1901 -94 9 695 845 10 0 0 chrUextra 14495531 14495631 -14509025 - SSU-rRNA_Dme rRNA rRNA 0 1995 1896 9 695 1892 9 0 0 chrUextra 14495731 14495953 -14508703 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 695 21 95 0 0 chrUextra 14495965 14496028 -14508628 + AT_rich Low_complexity Low_complexity 1 63 0 9 695 34 24 0 0 chrUextra 14496241 14496282 -14508374 + AT_rich Low_complexity Low_complexity 1 41 0 9 695 6239 4 1 0 chrUextra 14497371 14498091 -14506565 - R2_DM LINE R2 -827 2780 2060 9 695 6081 4 1 1 chrUextra 14498191 14498911 -14505745 + R1_DM LINE R1 3527 4246 -1110 9 695 5103 19 2 0 chrUextra 14499011 14499626 -14505030 + R1_DM LINE R1 4741 5356 0 9 695 461 75 15 0 chrUextra 14499659 14499726 -14504930 + R1_DM LINE R1 1 68 -5288 9 695 1418 6 6 0 chrUextra 14499831 14500000 -14504656 - R1_DM LINE R1 -352 5004 4835 9 695 4716 29 2 7 chrUextra 14500000 14500551 -14504105 - R1_DM LINE R1 -522 4834 4287 9 695 605 144 0 0 chrUextra 14500651 14500748 -14503908 - NTS_DM Other Other -136 104 8 9 695 281 146 21 0 chrUextra 14500846 14500894 -14503762 - NTS_DM Other Other -191 49 1 9 695 1094 144 20 5 chrUextra 14500925 14501127 -14503529 - NTS_DM Other Other -35 205 1 9 695 242 183 45 68 chrUextra 14501127 14501215 -14503441 - NTS_DM Other Other 0 240 155 9 695 342 150 67 48 chrUextra 14501266 14501371 -14503285 - NTS_DM Other Other 0 240 134 9 695 6695 1 0 1 chrUextra 14501471 14502191 -14502465 - LSU-rRNA_Dme rRNA rRNA -439 3461 2743 9 695 3081 191 15 7 chrUextra 14502291 14502976 -14501680 - SAR_DM Satellite Satellite -603 869 180 9 695 966 99 0 0 chrUextra 14502870 14503011 -14501645 + ARS406_DM Unknown Unknown 1 141 -212 9 695 6188 1 0 0 chrUextra 14503111 14503772 -14500884 + R2_DM LINE R2 2945 3605 -2 9 695 502 35 0 0 chrUextra 14503774 14503831 -14500825 + LSU-rRNA_Dme rRNA rRNA 2578 2634 -1266 9 695 3061 196 18 26 chrUextra 14503935 14504647 -14500009 + SAR_DM Satellite Satellite 1 706 -225 9 695 6589 3 0 0 chrUextra 14504751 14505471 -14499185 - IVK_DM LINE I -2217 3185 2466 9 695 21 89 0 0 chrUextra 14506000 14506056 -14498600 + AT_rich Low_complexity Low_complexity 1 56 0 9 695 1989 0 0 5 chrUextra 14506075 14506291 -14498365 - SSU-rRNA_Dme rRNA rRNA 0 1995 1781 9 695 1619 5 5 0 chrUextra 14506391 14506580 -14498076 + ROO_I LTR Pao 8067 8256 0 9 695 4022 0 0 0 chrUextra 14506580 14507008 -14497648 + ROO_LTR LTR Pao 1 428 0 9 695 6570 0 0 0 chrUextra 14507211 14507931 -14496725 - R1_DM LINE R1 -3441 1915 1196 9 695 6525 1 0 1 chrUextra 14508031 14508751 -14495905 - ROO_I LTR Pao -5119 3137 2419 9 695 533 141 24 0 chrUextra 14508917 14509002 -14495654 + NTS_DM Other Other 4 90 -150 9 695 28 48 0 0 chrUextra 14509275 14509317 -14495339 + AT_rich Low_complexity Low_complexity 1 42 0 9 695 2189 29 0 4 chrUextra 14509671 14509946 -14494710 - BATUMI_I LTR Pao -387 7576 7303 9 695 3361 26 9 12 chrUextra 14509969 14510391 -14494265 + BATUMI_I LTR Pao 6427 6847 -1116 9 695 6001 21 29 7 chrUextra 14510491 14511211 -14493445 + FW_DM LINE Jockey 3818 4553 -139 9 695 3389 183 10 6 chrUextra 14511321 14512029 -14492627 - SAR_DM Satellite Satellite -535 937 227 9 695 5292 11 0 48 chrUextra 14512131 14512552 -14492104 - DM176_I LTR Gypsy -5484 936 537 9 695 208 28 26 53 chrUextra 14512552 14512590 -14492066 + (TTA)n Simple_repeat Simple_repeat 3 39 0 9 695 5292 11 0 48 chrUextra 14512590 14512851 -14491805 - DM176_I LTR Gypsy -5884 536 287 9 695 3997 36 14 7 chrUextra 14512951 14513671 -14490985 - Transib5 DNA Transib -1049 1952 1187 9 695 2744 175 99 42 chrUextra 14513771 14514491 -14490165 - TAHRE LINE telomeric -2561 7902 7142 9 695 6641 3 0 3 chrUextra 14515413 14516131 -14488525 + SSU-rRNA_Dme rRNA rRNA 90 805 -1190 9 695 394 204 0 19 chrUextra 14516237 14516342 -14488314 + XDMR_DM Unknown Unknown 258 360 0 9 695 3213 181 13 20 chrUextra 14516256 14516951 -14487705 - SAR_DM Satellite Satellite -354 1118 429 9 695 6513 0 1 0 chrUextra 14517051 14517771 -14486885 + FW_DM LINE Jockey 2713 3433 -1259 9 695 5043 70 109 0 chrUextra 14517871 14518571 -14486085 + TART LINE telomeric 1084 1859 -12618 9 695 6233 26 3 0 chrUextra 14518691 14519411 -14485245 - R1_DM LINE R1 -3145 2211 1490 9 695 6562 0 1 6 chrUextra 14519511 14520231 -14484425 + SSU-rRNA_Dme rRNA rRNA 551 1267 -728 9 695 3055 206 4 10 chrUextra 14520332 14521051 -14483605 - SAR_DM Satellite Satellite -563 909 195 9 695 6120 15 3 4 chrUextra 14521151 14521871 -14482785 - PROTOP_A DNA P -296 809 91 9 695 6393 0 3 3 chrUextra 14521971 14522691 -14481965 - R1_DM LINE R1 -3831 1525 806 9 695 6500 3 0 0 chrUextra 14522796 14523511 -14481145 - LSU-rRNA_Dme rRNA rRNA -2860 1040 326 9 695 6507 1 19 0 chrUextra 14523611 14524331 -14480325 + ROO_I LTR Pao 5552 6285 -1971 9 695 6412 6 3 7 chrUextra 14524431 14525151 -14479505 + DM412 LTR Gypsy 103 819 -6078 9 695 3420 178 7 10 chrUextra 14525259 14525970 -14478686 - SAR_DM Satellite Satellite -569 903 195 9 695 386 301 16 27 chrUextra 14526072 14526260 -14478396 - Gypsy7_I LTR Gypsy -3633 1351 1166 9 695 3523 44 0 5 chrUextra 14526359 14526791 -14477865 - PROTOP_A DNA P 0 1105 676 9 695 2093 8 4 0 chrUextra 14527364 14527603 -14477053 - ALUII_DM Unknown Unknown 0 240 1 9 695 5505 38 5 0 chrUextra 14527711 14528363 -14476293 + DIVER2_I LTR Pao 509 1163 -2984 9 695 6182 26 15 0 chrUextra 14528531 14529251 -14475405 - R1_DM LINE R1 -3119 2237 1507 9 695 3624 176 7 7 chrUextra 14529353 14530069 -14474587 + SAR_DM Satellite Satellite 346 1061 -411 9 695 6390 15 8 0 chrUextra 14530171 14530891 -14473765 + Invader3_I LTR Gypsy 1995 2720 -2168 9 695 21 89 0 0 chrUextra 14531163 14531219 -14473437 + AT_rich Low_complexity Low_complexity 1 56 0 9 695 3392 180 12 11 chrUextra 14531811 14532531 -14472125 + SAR_DM Satellite Satellite 263 983 -489 9 695 6530 7 1 0 chrUextra 14532631 14533351 -14471305 + R1_DM LINE R1 4208 4928 -428 9 695 2533 102 19 53 chrUextra 14533452 14534152 -14470504 - DMSAT6 Satellite Satellite -28 675 1 9 695 6537 0 0 0 chrUextra 14534271 14534991 -14469665 + BLOOD_I LTR Gypsy 4522 5241 -1372 9 695 6501 19 0 0 chrUextra 14535091 14535811 -14468845 + BATUMI_I LTR Pao 3601 4320 -3643 9 695 6390 3 0 0 chrUextra 14535925 14536631 -14468025 + LSU-rRNA_Dme rRNA rRNA 218 923 -2977 9 695 6593 1 1 1 chrUextra 14536731 14537451 -14467205 + DOC LINE Jockey 3826 4545 -180 9 695 2109 210 86 103 chrUextra 14537561 14538271 -14466385 + Gypsy3_I LTR Gypsy 73 770 -5407 9 695 3133 183 39 11 chrUextra 14538371 14539088 -14465568 - SAR_DM Satellite Satellite -544 928 192 9 695 6428 18 0 0 chrUextra 14539191 14539911 -14464745 - R1_DM LINE R1 -585 4771 4052 9 695 6087 36 1 1 chrUextra 14540011 14540731 -14463925 - R1_DM LINE R1 -3833 1523 804 9 695 4785 19 7 10 chrUextra 14540843 14541420 -14463236 + BATUMI_I LTR Pao 6427 7001 -962 9 695 2059 268 30 42 chrUextra 14540855 14541549 -14463107 - MAX_I LTR Pao -668 7246 6561 9 695 6045 27 1 0 chrUextra 14541672 14542371 -14462285 - FW_DM LINE Jockey -737 3955 3256 9 695 248 157 19 56 chrUextra 14542471 14542525 -14462131 + HETRP_DM Satellite Satellite 1631 1682 -190 9 695 244 208 0 19 chrUextra 14542568 14542622 -14462034 + HETRP_DM Satellite Satellite 1580 1632 -240 9 695 344 174 250 42 chrUextra 14542669 14542765 -14461891 + HETRP_DM Satellite Satellite 1519 1634 -238 9 695 860 176 12 29 chrUextra 14542813 14542983 -14461673 + HETRP_DM Satellite Satellite 1516 1682 -190 9 695 244 208 0 19 chrUextra 14543026 14543080 -14461576 + HETRP_DM Satellite Satellite 1580 1632 -240 9 695 236 159 0 83 chrUextra 14543127 14543175 -14461481 + HETRP_DM Satellite Satellite 1519 1562 -310 9 695 2057 151 27 68 chrUextra 14543291 14544010 -14460646 + HETA LINE telomeric 4 679 -5402 9 695 4325 4 0 0 chrUextra 14544111 14544582 -14460074 + ACCORD_LTR LTR Gypsy 88 558 0 9 695 2079 35 4 4 chrUextra 14544582 14544831 -14459825 + NINJA_I LTR Pao 665 913 -5098 9 695 6525 11 1 0 chrUextra 14544931 14545651 -14459005 - Gypsy6_I LTR Gypsy -223 6789 6069 9 695 6045 10 1 12 chrUextra 14545751 14546471 -14458185 - R1_DM LINE R1 -4211 1145 434 9 695 575 12 48 36 chrUextra 14546578 14546661 -14457995 + NTS_DM Other Other 157 240 0 9 695 1965 4 17 17 chrUextra 14546661 14546901 -14457755 + NTS_DM Other Other 1 240 0 9 695 2006 0 17 13 chrUextra 14546901 14547140 -14457516 + NTS_DM Other Other 1 240 0 9 695 1352 7 0 0 chrUextra 14547140 14547291 -14457365 + NTS_DM Other Other 1 151 -89 9 695 201 121 0 0 chrUextra 14547819 14547852 -14456804 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 695 267 215 11 151 chrUextra 14548283 14548376 -14456280 + DM176_LTR LTR Gypsy 190 269 -238 9 695 282 191 59 0 chrUextra 14548485 14548553 -14456103 + DM176_LTR LTR Gypsy 295 366 -141 9 695 632 148 40 16 chrUextra 14548570 14548694 -14455962 + DMTOM1_LTR LTR Gypsy 284 410 0 9 695 392 103 14 29 chrUextra 14548694 14548755 -14455901 + DMTOM1_LTR LTR Gypsy 349 408 -2 9 695 1293 14 0 0 chrUextra 14548784 14548931 -14455725 - QUASIMODO_LTR LTR Gypsy 0 658 512 9 696 2789 64 75 4 chrUextra 14549031 14549751 -14454905 - IDEFIX_I LTR Gypsy -2486 3142 2372 9 696 6220 24 4 0 chrUextra 14549851 14550571 -14454085 - R1_DM LINE R1 -1885 3471 2749 9 696 2510 116 11 13 chrUextra 14550671 14551391 -14453265 - DMSAT6 Satellite Satellite -80 719 1 9 696 2443 7 0 0 chrUextra 14551507 14551783 -14452873 - Copia_LTR LTR Copia 0 276 1 9 696 366 270 48 11 chrUextra 14551817 14552006 -14452650 - MDG3_I LTR Gypsy -2407 2579 2463 9 696 5751 44 3 11 chrUextra 14552311 14553031 -14451625 + BATUMI_I LTR Pao 2938 3651 -4312 9 696 6440 19 0 0 chrUextra 14553951 14554671 -14449985 - BATUMI_I LTR Pao -2743 5220 4501 9 696 21 89 0 0 chrUextra 14555251 14555307 -14449349 + AT_rich Low_complexity Low_complexity 1 56 0 9 696 1522 6 0 0 chrUextra 14555326 14555491 -14449165 - SSU-rRNA_Dme rRNA rRNA 0 1995 1831 9 696 1790 18 13 18 chrUextra 14555593 14555818 -14448838 - NTS_DM Other Other -16 224 1 9 696 1878 21 17 17 chrUextra 14555818 14556058 -14448598 - NTS_DM Other Other 0 240 1 9 696 1526 20 20 20 chrUextra 14556058 14556261 -14448395 - NTS_DM Other Other 0 240 38 9 696 386 0 20 0 chrUextra 14556261 14556311 -14448345 - NTS_DM Other Other -107 133 83 9 696 437 69 0 0 chrUextra 14557036 14557094 -14447562 - DNAREP1_DM LINE Penelope -9 585 528 9 696 6604 3 0 0 chrUextra 14557231 14557951 -14446705 + DM176_I LTR Gypsy 2460 3179 -3241 9 696 3743 23 0 2 chrUextra 14558051 14558482 -14446174 + R1_DM LINE R1 4925 5354 -2 9 696 1874 75 8 0 chrUextra 14558517 14558771 -14445885 + R1_DM LINE R1 1 256 -5100 9 696 28 48 0 0 chrUextra 14558980 14559022 -14445634 + AT_rich Low_complexity Low_complexity 1 42 0 9 696 534 119 36 0 chrUextra 14559295 14559379 -14445277 - NTS_DM Other Other -150 90 4 9 696 714 10 10 29 chrUextra 14559489 14559591 -14445065 - NTS_DM Other Other -78 162 63 9 696 6385 3 1 1 chrUextra 14559691 14560411 -14444245 - R1_DM LINE R1 -3919 1437 718 9 696 6392 14 0 4 chrUextra 14560511 14561231 -14443425 + Gypsy2_I LTR Gypsy 5237 5953 -182 9 696 3578 163 14 11 chrUextra 14561343 14562049 -14442607 - SAR_DM Satellite Satellite -396 1076 369 9 696 3166 184 11 23 chrUextra 14562152 14562854 -14441802 + SAR_DM Satellite Satellite 425 1118 -354 9 696 418 185 0 21 chrUextra 14562777 14562871 -14441785 - XDMR_DM Unknown Unknown -9 351 260 9 696 2382 8 0 0 chrUextra 14563791 14564051 -14440605 + R1_DM LINE R1 5097 5356 0 9 696 3249 78 5 5 chrUextra 14564072 14564508 -14440148 + R1_DM LINE R1 23 458 -4898 9 696 6208 10 24 1 chrUextra 14564620 14565331 -14439325 - FW_DM LINE Jockey -1829 2863 2137 9 696 2382 192 24 14 chrUextra 14566251 14566971 -14437685 - SAR_DM Satellite Satellite -737 726 1 9 696 387 0 0 0 chrUextra 14567071 14567114 -14437542 + (TTCTC)n Simple_repeat Simple_repeat 5 47 0 9 696 3616 35 12 0 chrUextra 14567891 14568316 -14436340 + DOC3_DM LINE Jockey 1872 2301 -2439 9 696 2550 36 13 3 chrUextra 14568302 14568611 -14436045 + DOC3_DM LINE Jockey 2520 2831 -1909 9 696 4080 47 43 50 chrUextra 14568711 14569290 -14435366 - Baggins1 LINE LOA -4736 717 143 9 696 3338 183 8 11 chrUextra 14569533 14570251 -14434405 - SAR_DM Satellite Satellite -549 923 208 9 696 713 191 13 26 chrUextra 14570544 14570700 -14433956 + HETRP_DM Satellite Satellite 1529 1682 -190 9 696 729 184 13 26 chrUextra 14570853 14571009 -14433647 + HETRP_DM Satellite Satellite 1529 1682 -190 9 696 259 105 0 0 chrUextra 14571171 14571209 -14433447 - HMSBEAGLE_I LTR Gypsy -6317 212 175 9 696 376 49 65 16 chrUextra 14571231 14571293 -14433363 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 696 990 173 102 15 chrUextra 14571292 14571497 -14433159 - DMLTR5 LTR Gypsy 0 266 44 9 696 6281 4 17 0 chrUextra 14571991 14572711 -14431945 - MDG1_I LTR Gypsy -4793 1803 1072 9 696 3023 211 16 18 chrUextra 14572813 14573527 -14431129 + SAR_DM Satellite Satellite 1 712 -203 9 696 3486 179 8 8 chrUextra 14573630 14574349 -14430307 - SAR_DM Satellite Satellite -470 1002 284 9 696 3389 172 13 15 chrUextra 14575268 14575982 -14428674 - SAR_DM Satellite Satellite -515 957 246 9 696 6660 3 0 0 chrUextra 14576087 14576806 -14427850 + GTWIN_I LTR Gypsy 405 1123 -5298 9 696 3577 168 10 7 chrUextra 14576916 14577622 -14427034 - SAR_DM Satellite Satellite -396 1076 369 9 696 1293 294 29 35 chrUextra 14577728 14578239 -14426417 - FROGGER_I LTR Copia -1150 927 420 9 696 3164 182 35 14 chrUextra 14578549 14579262 -14425394 + SAR_DM Satellite Satellite 247 974 -498 9 696 6307 3 18 1 chrUextra 14579363 14580082 -14424574 + ROO_I LTR Pao 27 757 -7499 9 696 6431 6 3 8 chrUextra 14580182 14580901 -14423755 + Gypsy6_I LTR Gypsy 1929 2643 -4369 9 696 1979 241 114 38 chrUextra 14581001 14581714 -14422942 - ROVER-I_DM LTR Gypsy -4243 2341 1575 9 696 3346 177 14 12 chrUextra 14581820 14582539 -14422117 - SAR_DM Satellite Satellite -556 916 197 9 696 6031 1 0 3 chrUextra 14582707 14583358 -14421298 + SSU-rRNA_Dme rRNA rRNA 1 649 -1346 9 696 6445 13 0 4 chrUextra 14583458 14584175 -14420481 + Gypsy2_I LTR Gypsy 1749 2462 -3673 9 696 6596 3 0 0 chrUextra 14584277 14584996 -14419660 - DMRT1B LINE R1 -1078 4105 3387 9 696 6337 7 0 0 chrUextra 14585097 14585815 -14418841 + QUASIMODO_I LTR Gypsy 1004 1721 -4339 9 696 4051 39 0 2 chrUextra 14585915 14586403 -14418253 + TRANSIB2 DNA Transib 180 666 -2178 9 696 1942 21 0 0 chrUextra 14586395 14586634 -14418022 + Invader2_I LTR Gypsy 196 434 -4158 9 696 6255 8 1 1 chrUextra 14586734 14587453 -14417203 + QUASIMODO_I LTR Gypsy 3906 4624 -1436 9 696 936 9 0 27 chrUextra 14587562 14587674 -14416982 - NTS_DM Other Other -107 133 25 9 696 22 56 0 0 chrUextra 14587700 14587736 -14416920 + AT_rich Low_complexity Low_complexity 1 36 0 9 696 278 176 0 19 chrUextra 14587749 14587801 -14416855 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14587832 14587884 -14416772 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14587924 14587976 -14416680 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14588016 14588068 -14416588 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14588108 14588160 -14416496 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 27 0 0 0 chrUextra 14588162 14588189 -14416467 + AT_rich Low_complexity Low_complexity 1 27 0 9 696 6282 21 1 1 chrUextra 14588372 14589091 -14415565 - R1_DM LINE R1 -35 5321 4603 9 696 3621 216 23 37 chrUextra 14590010 14591544 -14413112 - SAR_DM Satellite Satellite -884 1513 1 9 696 2780 90 43 22 chrUextra 14591648 14592367 -14412289 + DMSAT6 Satellite Satellite 1 733 -125 9 696 6005 35 22 0 chrUextra 14592467 14593186 -14411470 - R1_DM LINE R1 -1911 3445 2711 9 696 4509 2 0 2 chrUextra 14593286 14593775 -14410881 + LSU-rRNA_Dme rRNA rRNA 2145 2632 -1268 9 696 2079 0 9 0 chrUextra 14593775 14594005 -14410651 + R1_DM LINE R1 1 232 -5124 9 696 3570 45 69 1 chrUextra 14594109 14594824 -14409832 - PROTOP DNA P -252 853 224 9 696 2452 4 0 0 chrUextra 14595219 14595486 -14409170 - MDG3_LTR LTR Gypsy 0 267 1 9 696 1366 13 0 0 chrUextra 14595486 14595643 -14409013 - MDG3_I LTR Gypsy 0 4986 4830 9 696 5577 59 18 4 chrUextra 14595743 14596462 -14408194 + IDEFIX_I LTR Gypsy 2365 3093 -2535 9 696 3143 237 45 42 chrUextra 14596562 14598099 -14406557 + SAR_DM Satellite Satellite 1 1541 -396 9 696 3435 0 0 0 chrUextra 14598200 14598572 -14406084 + R1_DM LINE R1 4985 5356 0 9 696 3242 3 0 0 chrUextra 14598570 14598919 -14405737 + LSU-rRNA_Dme rRNA rRNA 2640 2988 -912 9 696 2540 103 21 10 chrUextra 14599020 14599733 -14404923 + DMSAT6 Satellite Satellite 1 721 -66 9 696 4555 28 20 2 chrUextra 14599838 14600383 -14404273 + R1_DM LINE R1 4512 5066 -290 9 696 1004 35 0 0 chrUextra 14600380 14600494 -14404162 + R1_DM LINE R1 5243 5356 0 9 696 257 0 0 0 chrUextra 14600527 14600557 -14404099 + R1_DM LINE R1 1 30 -5326 9 696 463 0 19 0 chrUextra 14600657 14600711 -14403945 + SSU-rRNA_Dme rRNA rRNA 1941 1995 0 9 696 21 89 0 0 chrUextra 14600730 14600786 -14403870 + AT_rich Low_complexity Low_complexity 1 56 0 9 696 1556 6 0 0 chrUextra 14601476 14601644 -14403012 + NOMAD_LTR LTR Gypsy 351 518 0 9 696 4980 2 0 4 chrUextra 14601644 14602195 -14402461 - ROO_I LTR Pao -3543 4713 4165 9 696 21 89 0 0 chrUextra 14602680 14602736 -14401920 + AT_rich Low_complexity Low_complexity 1 56 0 9 696 6306 24 0 0 chrUextra 14603115 14603833 -14400823 - R1_DM LINE R1 -2936 2420 1703 9 696 1084 209 4 4 chrUextra 14604756 14604996 -14399660 - Stalker2_I LTR Gypsy -6872 530 291 9 696 28 48 0 0 chrUextra 14605003 14605045 -14399611 + AT_rich Low_complexity Low_complexity 1 42 0 9 696 2483 65 5 19 chrUextra 14605129 14605471 -14399185 - STALKER4_LTR LTR Gypsy -3 399 72 9 696 6369 1 3 1 chrUextra 14605571 14606290 -14398366 - R1_DM LINE R1 -4002 1354 635 9 696 1705 11 0 0 chrUextra 14606391 14606577 -14398079 + CIRCE LINE Composite 785 970 -5386 9 696 2454 59 0 75 chrUextra 14606719 14607065 -14397591 + CIRCE LINE Composite 973 1292 -5064 9 696 271 232 0 0 chrUextra 14607040 14607096 -14397560 + DM176_I LTR Gypsy 2641 2696 -3724 9 696 975 271 58 44 chrUextra 14607211 14607758 -14396898 + SAR_DM Satellite Satellite 278 832 -640 9 696 367 298 60 38 chrUextra 14607609 14607926 -14396730 - XDMR_DM Unknown Unknown -1 359 36 9 696 4235 2 0 0 chrUextra 14608847 14609341 -14395315 + STALKER4_I LTR Gypsy 6037 6530 0 9 696 2080 0 0 0 chrUextra 14609341 14609566 -14395090 + STALKER4_LTR LTR Gypsy 1 225 -177 9 696 1856 38 8 4 chrUextra 14609666 14609905 -14394751 + NTS_DM Other Other 1 240 0 9 696 1899 17 17 17 chrUextra 14609905 14610145 -14394511 + NTS_DM Other Other 1 240 0 9 696 1899 17 17 17 chrUextra 14610145 14610385 -14394271 + NTS_DM Other Other 1 240 0 9 696 6200 26 1 3 chrUextra 14610485 14611204 -14393452 - R1_DM LINE R1 -93 5263 4546 9 696 6496 6 1 0 chrUextra 14611304 14612023 -14392633 + R1_DM LINE R1 2066 2785 -2571 9 696 5981 4 1 4 chrUextra 14612123 14612842 -14391814 + G6_DM LINE Jockey 99 815 -1227 9 696 6164 7 0 0 chrUextra 14612942 14613661 -14390995 + DMRT1B LINE R1 1478 2196 -2987 9 696 6154 1 1 1 chrUextra 14613761 14614480 -14390176 + G_DM LINE Jockey 1290 2008 -2338 9 696 6111 0 1 1 chrUextra 14614580 14615299 -14389357 + TABOR_I LTR Gypsy 60 778 -5558 9 696 2449 30 383 0 chrUextra 14615399 14615872 -14388784 + MDG1_I LTR Gypsy 5943 6596 0 9 696 339 105 0 0 chrUextra 14615888 14615945 -14388711 + (TAA)n Simple_repeat Simple_repeat 3 59 0 9 696 1097 77 135 0 chrUextra 14615947 14616117 -14388539 + MDG1_LTR LTR Gypsy 94 286 -156 9 696 6041 25 0 0 chrUextra 14616218 14616937 -14387719 + DIVER_I LTR Pao 4778 5496 -147 9 696 2838 199 14 31 chrUextra 14617037 14617756 -14386900 - SAR_DM Satellite Satellite -1052 707 1 9 696 3101 189 7 7 chrUextra 14617856 14618575 -14386081 + SAR_DM Satellite Satellite 205 923 -549 9 696 6192 3 0 0 chrUextra 14618675 14619394 -14385262 + FW_DM LINE Jockey 748 1466 -3226 9 696 693 103 241 0 chrUextra 14619882 14620027 -14384629 + FB4_DM DNA Tc1 3 182 -3907 9 696 250 33 0 0 chrUextra 14620035 14620065 -14384591 - Baggins1 LINE LOA -697 4756 4727 9 696 697 61 20 0 chrUextra 14620313 14620411 -14384245 + DIVER2_I LTR Pao 2141 2240 -1907 9 696 5111 26 2 0 chrUextra 14620415 14621032 -14383624 + DIVER2_I LTR Pao 2598 3215 -932 9 696 1158 122 0 0 chrUextra 14621139 14621319 -14383337 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 696 4319 4 0 0 chrUextra 14621320 14621827 -14382829 + DM176_LTR LTR Gypsy 1 507 0 9 696 1795 252 5 11 chrUextra 14622037 14622670 -14381986 - Gypsy11_I LTR Gypsy -137 3387 2759 9 696 3232 168 7 14 chrUextra 14622770 14623469 -14381187 - SAR_DM Satellite Satellite -453 1019 326 9 696 5821 31 1 3 chrUextra 14623589 14624308 -14380348 + BATUMI_I LTR Pao 4341 5058 -2905 9 696 5763 17 4 3 chrUextra 14624408 14625127 -14379529 + STALKER4_I LTR Gypsy 1858 2577 -3953 9 696 1338 18 6 6 chrUextra 14625228 14625393 -14379263 - Gypsy_LTR LTR Gypsy -317 165 1 9 696 4671 13 2 0 chrUextra 14625393 14625946 -14378710 - Gypsy_I LTR Gypsy 0 6507 5954 9 696 5909 15 1 1 chrUextra 14626046 14626765 -14377891 - R1_DM LINE R1 -902 4454 3736 9 696 1190 127 19 78 chrUextra 14626865 14627173 -14377483 - BATUMI_I LTR Pao -6925 1038 749 9 696 1170 123 92 54 chrUextra 14627214 14627584 -14377072 - BATUMI_I LTR Pao -7194 769 386 9 696 3539 192 4 0 chrUextra 14627684 14628403 -14376253 - ROVER-I_DM LTR Gypsy -2377 4207 3486 9 696 5120 27 1 1 chrUextra 14628503 14629173 -14375483 - IDEFIX_I LTR Gypsy -452 5176 4507 9 696 275 82 0 20 chrUextra 14629172 14629222 -14375434 - IDEFIX_I LTR Gypsy -1632 3996 3948 9 696 2782 174 21 18 chrUextra 14629364 14630041 -14374615 + SAR_DM Satellite Satellite 184 862 -610 9 696 6267 0 0 0 chrUextra 14630141 14630860 -14373796 - R2_DM LINE R2 -2293 1314 596 9 696 6194 0 3 3 chrUextra 14630960 14631679 -14372977 - SSU-rRNA_Dme rRNA rRNA -6 1989 1271 9 696 6183 0 1 4 chrUextra 14632598 14633317 -14371339 + SSU-rRNA_Dme rRNA rRNA 993 1709 -286 9 696 3003 170 25 14 chrUextra 14633417 14634132 -14370524 - SAR_DM Satellite Satellite -504 968 246 9 696 6197 1 1 1 chrUextra 14634240 14634955 -14369701 - SSU-rRNA_Dme rRNA rRNA -692 1303 589 9 696 2364 11 3 3 chrUextra 14635055 14635339 -14369317 + SSU-rRNA_Dme rRNA rRNA 1402 1685 -310 9 696 1316 0 0 0 chrUextra 14635324 14635479 -14369177 + DM297_LTR LTR Gypsy 260 414 0 9 696 2084 4 0 0 chrUextra 14635532 14635772 -14368884 + SSU-rRNA_Dme rRNA rRNA 1 240 -1755 9 696 3024 190 7 11 chrUextra 14635874 14636593 -14368063 + SAR_DM Satellite Satellite 278 993 -479 9 696 1213 19 0 7 chrUextra 14636695 14636850 -14367806 - NTS_DM Other Other -86 154 1 9 696 1408 20 20 20 chrUextra 14636850 14637053 -14367603 - NTS_DM Other Other 0 240 38 9 696 817 0 0 0 chrUextra 14637053 14637149 -14367507 - NTS_DM Other Other -107 133 38 9 696 832 9 9 27 chrUextra 14637149 14637260 -14367396 - NTS_DM Other Other -107 133 25 9 696 21 57 0 0 chrUextra 14637286 14637321 -14367335 + AT_rich Low_complexity Low_complexity 1 35 0 9 696 575 33 0 11 chrUextra 14637321 14637412 -14367244 - NTS_DM Other Other -39 201 112 9 696 6023 3 6 3 chrUextra 14637516 14638231 -14366425 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1024 9 696 6168 0 0 0 chrUextra 14638333 14639050 -14365606 + ROO_I LTR Pao 942 1658 -6598 9 696 2776 46 11 0 chrUextra 14639496 14639869 -14364787 + PROTOP_A DNA P 74 450 -655 9 696 3895 56 28 28 chrUextra 14639969 14640539 -14364117 - R1_DM LINE R1 -4519 837 268 9 696 1120 40 7 7 chrUextra 14640538 14640688 -14363968 - R1_DM LINE R1 -1442 3914 3765 9 696 2832 9 0 39 chrUextra 14640788 14641148 -14363508 - ACCORD2_I LTR Gypsy -6866 346 1 9 696 1794 9 0 18 chrUextra 14641148 14641367 -14363289 - ACCORD2_LTR LTR Gypsy 0 215 1 9 696 1103 32 129 0 chrUextra 14641367 14641506 -14363150 - R1_DM LINE R1 -2931 2425 2267 9 696 6101 0 0 1 chrUextra 14641607 14642326 -14362330 + STALKER4_I LTR Gypsy 3243 3960 -2570 9 696 5705 35 1 0 chrUextra 14642428 14643145 -14361511 + R1_DM LINE R1 2970 3687 -1669 9 696 6169 6 0 1 chrUextra 14643245 14643964 -14360692 + STALKER4_I LTR Gypsy 3845 4562 -1968 9 696 3063 177 17 10 chrUextra 14644064 14644783 -14359873 + SAR_DM Satellite Satellite 195 918 -554 9 696 5988 0 3 0 chrUextra 14644886 14645602 -14359054 + ROO_I LTR Pao 4462 5179 -3077 9 696 2976 181 7 21 chrUextra 14645702 14646419 -14358237 + SAR_DM Satellite Satellite 412 1118 -354 9 696 6003 11 0 0 chrUextra 14646521 14647240 -14357416 - IDEFIX_I LTR Gypsy -3994 1634 916 9 696 2874 198 6 7 chrUextra 14647346 14648055 -14356601 + SAR_DM Satellite Satellite 195 902 -570 9 696 6244 0 0 0 chrUextra 14648159 14648878 -14355778 + FW_DM LINE Jockey 2937 3655 -1037 9 696 2992 183 17 10 chrUextra 14648980 14649697 -14354959 + SAR_DM Satellite Satellite 293 1014 -458 9 696 1627 0 15 0 chrUextra 14649797 14649994 -14354662 - R1_DM LINE R1 -5155 201 2 9 696 4500 4 0 0 chrUextra 14649996 14650516 -14354140 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2113 9 696 5768 32 0 0 chrUextra 14650616 14651335 -14353321 + FW_DM LINE Jockey 2926 3644 -1048 9 696 5281 76 0 11 chrUextra 14651435 14652154 -14352502 - Gypsy12_I LTR Gypsy -296 5250 4540 9 696 5868 15 0 6 chrUextra 14652254 14652973 -14351683 + DMRT1B LINE R1 3873 4587 -596 9 696 6085 6 0 0 chrUextra 14653077 14653792 -14350864 - R1_DM LINE R1 -1931 3425 2711 9 696 5950 11 3 0 chrUextra 14653892 14654611 -14350045 - QUASIMODO_I LTR Gypsy -2947 3113 2393 9 696 6052 0 11 3 chrUextra 14654711 14655428 -14349228 - MAX_I LTR Pao -6314 1600 878 9 696 1472 26 5 11 chrUextra 14655538 14655729 -14348927 - PROTOP_A DNA P -915 190 1 9 696 487 266 22 34 chrUextra 14656048 14656227 -14348429 - TV1I LTR Gypsy -5055 908 732 9 696 2968 179 8 15 chrUextra 14656353 14657068 -14347588 - SAR_DM Satellite Satellite -571 901 192 9 696 1017 8 0 8 chrUextra 14657168 14657292 -14347364 - NTS_DM Other Other -117 123 1 9 696 1756 17 17 17 chrUextra 14657292 14657532 -14347124 - NTS_DM Other Other 0 240 1 9 696 1734 21 17 17 chrUextra 14657532 14657772 -14346884 - NTS_DM Other Other 0 240 1 9 696 669 27 35 35 chrUextra 14657772 14657887 -14346769 - NTS_DM Other Other 0 240 126 9 696 374 77 0 0 chrUextra 14657987 14658039 -14346617 - CIRCE LINE Composite -5332 1024 973 9 696 3775 8 62 52 chrUextra 14658181 14658699 -14345957 - CIRCE LINE Composite -5386 970 448 9 696 1328 0 22 16 chrUextra 14658806 14658989 -14345667 + NTS_DM Other Other 57 240 0 9 696 1861 0 17 13 chrUextra 14658989 14659228 -14345428 + NTS_DM Other Other 1 240 0 9 696 1825 8 17 13 chrUextra 14659228 14659467 -14345189 + NTS_DM Other Other 1 240 0 9 696 512 0 0 0 chrUextra 14659467 14659525 -14345131 + NTS_DM Other Other 1 58 -182 9 696 5586 32 3 0 chrUextra 14659625 14660344 -14344312 - ROO_I LTR Pao -3088 5168 4448 9 696 2204 26 0 0 chrUextra 14660444 14660714 -14343942 - DM1731_LTR LTR Copia -66 270 1 9 696 3680 2 11 11 chrUextra 14660714 14661163 -14343493 - DM1731_I LTR Copia 0 3976 3528 9 696 6172 10 1 0 chrUextra 14661263 14661982 -14342674 + Gypsy6_I LTR Gypsy 6166 6885 -127 9 696 4370 53 57 21 chrUextra 14662082 14662798 -14341858 - STALKER4_I LTR Gypsy -4904 1626 885 9 696 201 121 0 0 chrUextra 14663152 14663185 -14341471 + (GA)n Simple_repeat Simple_repeat 1 33 0 9 696 5945 25 0 0 chrUextra 14663720 14664439 -14340217 - R1_DM LINE R1 -1543 3813 3095 9 696 184 30 29 29 chrUextra 14664539 14664573 -14340083 + (TA)n Simple_repeat Simple_repeat 1 34 0 9 696 21 57 0 0 chrUextra 14664573 14664608 -14340048 + AT_rich Low_complexity Low_complexity 1 35 0 9 696 338 94 0 54 chrUextra 14664610 14664712 -14339944 + MDG1_I LTR Gypsy 6551 6596 0 9 696 1533 20 0 0 chrUextra 14664716 14665062 -14339594 + (TAA)n Simple_repeat Simple_repeat 1 346 0 9 696 1036 87 148 5 chrUextra 14665062 14665258 -14339398 + MDG1_LTR LTR Gypsy 54 277 -165 9 696 3386 167 10 13 chrUextra 14666998 14667715 -14336941 + SAR_DM Satellite Satellite 342 1056 -416 9 696 5280 66 67 1 chrUextra 14667822 14668534 -14336122 + Baggins1 LINE LOA 4345 5103 -350 9 696 779 86 0 0 chrUextra 14668634 14668750 -14335906 + S_DM DNA Tc1 1621 1736 0 9 696 532 81 50 0 chrUextra 14668750 14668849 -14335807 - PROTOP_B DNA P -399 754 651 9 696 433 84 0 35 chrUextra 14668855 14668941 -14335715 + PROTOP_B DNA P 647 729 -424 9 696 755 49 266 0 chrUextra 14668953 14669144 -14335512 - PROTOP_B DNA P -518 635 394 9 696 1511 51 128 5 chrUextra 14669134 14669352 -14335304 - PROTOP_B DNA P -891 262 19 9 696 974 83 8 20 chrUextra 14669455 14670155 -14334501 - RSP Satellite Satellite -1 692 1 9 696 5971 4 36 0 chrUextra 14670272 14670991 -14333665 - Invader2_I LTR Gypsy -172 4420 3676 9 696 858 0 0 0 chrUextra 14671093 14671190 -14333466 - NTS_DM Other Other -106 134 38 9 696 847 9 0 44 chrUextra 14671190 14671304 -14333352 - NTS_DM Other Other -107 133 25 9 696 1304 18 0 6 chrUextra 14671356 14671521 -14333135 - NTS_DM Other Other -39 201 38 9 696 907 9 0 27 chrUextra 14671521 14671633 -14333023 - NTS_DM Other Other -107 133 25 9 696 22 56 0 0 chrUextra 14671659 14671695 -14332961 + AT_rich Low_complexity Low_complexity 1 36 0 9 696 269 125 0 0 chrUextra 14671708 14671748 -14332908 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 696 6227 15 0 4 chrUextra 14671910 14672629 -14332027 - MICROPIA_I LTR Gypsy -240 4236 3521 9 696 3243 177 11 21 chrUextra 14672729 14673446 -14331210 + SAR_DM Satellite Satellite 381 1090 -382 9 696 262 150 0 0 chrUextra 14673622 14673662 -14330994 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 696 269 125 0 0 chrUextra 14673705 14673745 -14330911 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 696 22 56 0 0 chrUextra 14673758 14673794 -14330862 + AT_rich Low_complexity Low_complexity 1 36 0 9 696 907 9 0 27 chrUextra 14673820 14673932 -14330724 + NTS_DM Other Other 25 133 -107 9 696 1304 18 0 6 chrUextra 14673932 14674097 -14330559 + NTS_DM Other Other 38 201 -39 9 696 886 18 0 27 chrUextra 14674149 14674261 -14330395 + NTS_DM Other Other 25 133 -107 9 696 4816 9 0 0 chrUextra 14674367 14674913 -14329743 - G2_DM LINE Jockey -261 2841 2296 9 696 861 84 0 37 chrUextra 14674950 14675086 -14329570 - G2_DM LINE Jockey -574 2528 2398 9 696 931 80 0 0 chrUextra 14675190 14675327 -14329329 + ARS406_DM Unknown Unknown 22 158 -195 9 696 2837 168 17 7 chrUextra 14675324 14675901 -14328755 - SAR_DM Satellite Satellite -558 914 332 9 696 32 0 0 0 chrUextra 14676182 14676214 -14328442 + AT_rich Low_complexity Low_complexity 1 32 0 9 696 3428 5 0 0 chrUextra 14676346 14676724 -14327932 + SSU-rRNA_Dme rRNA rRNA 1 378 -1617 9 696 6428 7 0 1 chrUextra 14676824 14677543 -14327113 - Gypsy4_I LTR Gypsy -4092 2196 1479 9 696 28 48 0 0 chrUextra 14677800 14677842 -14326814 + AT_rich Low_complexity Low_complexity 1 42 0 9 696 37 39 0 0 chrUextra 14678197 14678248 -14326408 + AT_rich Low_complexity Low_complexity 1 51 0 9 696 4501 52 33 107 chrUextra 14678462 14679180 -14325476 + Stalker2_I LTR Gypsy 3734 4398 -3004 9 696 836 0 0 0 chrUextra 14679281 14679375 -14325281 - NTS_DM Other Other -109 131 38 9 696 907 9 0 27 chrUextra 14679375 14679487 -14325169 - NTS_DM Other Other -107 133 25 9 696 1304 18 0 6 chrUextra 14679539 14679704 -14324952 - NTS_DM Other Other -39 201 38 9 696 907 9 0 27 chrUextra 14679704 14679816 -14324840 - NTS_DM Other Other -107 133 25 9 696 941 30 0 8 chrUextra 14679868 14680000 -14324656 - NTS_DM Other Other -39 201 71 9 697 3321 173 8 21 chrUextra 14680100 14680819 -14323837 + SAR_DM Satellite Satellite 381 1090 -382 9 697 5710 9 11 32 chrUextra 14680919 14681638 -14323018 - MDG1_I LTR Gypsy -5590 1006 303 9 697 23 50 0 48 chrUextra 14681818 14681881 -14322775 + AT_rich Low_complexity Low_complexity 1 60 0 9 697 27 29 0 0 chrUextra 14682405 14682439 -14322217 + AT_rich Low_complexity Low_complexity 1 34 0 9 697 6476 7 0 0 chrUextra 14682557 14683276 -14321380 + R1_DM LINE R1 4184 4902 -454 9 697 6399 0 0 0 chrUextra 14683376 14684095 -14320561 - DOC LINE Jockey -3367 1358 640 9 697 6364 6 10 3 chrUextra 14684195 14684914 -14319742 - Gypsy6_I LTR Gypsy -2416 4596 3873 9 697 3461 152 10 22 chrUextra 14685019 14685730 -14318926 - SAR_DM Satellite Satellite -425 1047 346 9 697 5944 20 3 7 chrUextra 14685833 14686552 -14318104 - CIRCE LINE Composite -1587 4769 4054 9 697 888 40 0 31 chrUextra 14686652 14686781 -14317875 + DM297_I LTR Gypsy 3878 4002 -2165 9 697 5056 8 0 0 chrUextra 14686752 14687371 -14317285 + DM297_I LTR Gypsy 5373 5991 -176 9 697 6254 1 0 0 chrUextra 14687471 14688190 -14316466 + DM176_I LTR Gypsy 1770 2488 -3932 9 697 1698 122 11 21 chrUextra 14688290 14688575 -14316081 - Gypsy12_I LTR Gypsy -5042 504 223 9 697 1177 194 166 36 chrUextra 14688569 14689008 -14315648 - Gypsy12_LTR LTR Gypsy -645 1691 1196 9 697 6374 3 1 1 chrUextra 14689109 14689828 -14314828 + LSU-rRNA_Dme rRNA rRNA 590 1308 -2592 9 697 3278 173 9 10 chrUextra 14689929 14690629 -14314027 + SAR_DM Satellite Satellite 378 1076 -396 9 697 2203 163 41 16 chrUextra 14690750 14691192 -14313464 - TART_B1 LINE telomeric -9397 1257 805 9 697 1458 144 15 33 chrUextra 14691193 14691466 -14313190 - TART LINE telomeric -7157 7320 7053 9 697 342 23 0 0 chrUextra 14691566 14691610 -14313046 + NTS_DM Other Other 158 201 -39 9 697 907 9 0 27 chrUextra 14691662 14691774 -14312882 + NTS_DM Other Other 25 133 -107 9 697 1304 18 0 6 chrUextra 14691774 14691939 -14312717 + NTS_DM Other Other 38 201 -39 9 697 889 18 0 27 chrUextra 14691991 14692103 -14312553 + NTS_DM Other Other 25 133 -107 9 697 1304 18 0 6 chrUextra 14692103 14692268 -14312388 + NTS_DM Other Other 38 201 -39 9 697 244 220 0 0 chrUextra 14692472 14692531 -14312125 + TIRANT_I LTR Gypsy 6974 7032 -660 9 697 2335 103 8 31 chrUextra 14692686 14693076 -14311580 + QUASIMODO_LTR LTR Gypsy 91 607 -51 9 697 3704 24 0 7 chrUextra 14693206 14693666 -14310990 - IDEFIX_I LTR Gypsy -2080 3548 3092 9 697 2243 29 0 0 chrUextra 14693647 14693923 -14310733 + IDEFIX_I LTR Gypsy 3726 4001 -1627 9 697 3443 3 0 0 chrUextra 14694023 14694400 -14310256 - SSU-rRNA_Dme rRNA rRNA -1618 377 1 9 697 32 0 0 0 chrUextra 14694532 14694564 -14310092 + AT_rich Low_complexity Low_complexity 1 32 0 9 697 6552 3 0 0 chrUextra 14694842 14695561 -14309095 + BS2 LINE Jockey 3458 4176 -545 9 697 2966 179 36 26 chrUextra 14695661 14696380 -14308276 - SAR_DM Satellite Satellite -314 1158 433 9 697 34 24 0 0 chrUextra 14696925 14696966 -14307690 + AT_rich Low_complexity Low_complexity 1 41 0 9 697 508 124 48 0 chrUextra 14696985 14697090 -14307566 - TART LINE telomeric -3998 10479 10370 9 697 4317 78 54 25 chrUextra 14697299 14698018 -14306638 + STALKER4_I LTR Gypsy 726 1465 -5065 9 697 3231 3 0 3 chrUextra 14698118 14698485 -14306171 - Stalker2_I LTR Gypsy -7036 366 1 9 697 3082 6 0 3 chrUextra 14698485 14698837 -14305819 - Stalker2_LTR LTR Gypsy 0 424 74 9 697 6411 6 0 7 chrUextra 14698937 14699656 -14305000 - MICROPIA_I LTR Gypsy -604 3872 3159 9 697 6356 1 1 0 chrUextra 14699756 14700475 -14304181 + STALKER4_I LTR Gypsy 4843 5562 -968 9 697 940 18 0 9 chrUextra 14700575 14700687 -14303969 + Invader1_LTR LTR Gypsy 313 423 0 9 697 5455 11 0 0 chrUextra 14700687 14701294 -14303362 + Invader1_I LTR Gypsy 1 607 -2579 9 697 6317 1 0 4 chrUextra 14701394 14702113 -14302543 - DOC LINE Jockey -2664 2061 1346 9 697 5852 31 0 0 chrUextra 14702213 14702932 -14301724 + MDG1_I LTR Gypsy 4514 5232 -1364 9 697 735 199 7 7 chrUextra 14703048 14703195 -14301461 + HETRP_DM Satellite Satellite 1529 1675 -197 9 697 713 206 7 7 chrUextra 14703357 14703504 -14301152 + HETRP_DM Satellite Satellite 1529 1675 -197 9 697 458 167 0 12 chrUextra 14703666 14703751 -14300905 + HETRP_DM Satellite Satellite 1529 1612 -260 9 697 5137 0 3 2 chrUextra 14703851 14704420 -14300236 + SSU-rRNA_Dme rRNA rRNA 1426 1995 0 9 697 5797 28 1 14 chrUextra 14704669 14705387 -14299269 - BATUMI_I LTR Pao -4538 3425 2717 9 697 4130 2 0 0 chrUextra 14705487 14705942 -14298714 + R1_DM LINE R1 4902 5356 0 9 697 2411 4 0 0 chrUextra 14705940 14706205 -14298451 + LSU-rRNA_Dme rRNA rRNA 2640 2904 -996 9 697 2702 192 42 45 chrUextra 14706305 14707023 -14297633 + TAHRE LINE telomeric 7229 7944 -2519 9 697 6523 0 1 1 chrUextra 14707123 14707841 -14296815 - LSU-rRNA_Dme rRNA rRNA -687 3213 2496 9 697 2218 12 4 0 chrUextra 14707941 14708192 -14296464 - ROO_LTR LTR Pao -176 252 1 9 697 3673 24 0 9 chrUextra 14708192 14708658 -14295998 - ROO_I LTR Pao 0 8256 7795 9 697 2969 194 15 20 chrUextra 14708763 14709473 -14295183 - SAR_DM Satellite Satellite -625 706 1 9 697 1860 88 48 68 chrUextra 14709578 14709933 -14294723 + ROVER-LTR_DM LTR Gypsy 20 367 0 9 697 1078 23 0 8 chrUextra 14709933 14710060 -14294596 + CIRCE LINE Composite 4370 4495 -1861 9 697 1386 67 44 9 chrUextra 14710060 14710286 -14294370 - S_DM DNA Tc1 0 1736 1503 9 697 5766 30 1 15 chrUextra 14710395 14711113 -14293543 + FW_DM LINE Jockey 1111 1818 -2874 9 697 3379 171 10 14 chrUextra 14711213 14711931 -14292725 + SAR_DM Satellite Satellite 304 1018 -454 9 697 27 29 0 0 chrUextra 14712062 14712096 -14292560 + AT_rich Low_complexity Low_complexity 1 34 0 9 697 23 50 0 48 chrUextra 14712620 14712683 -14291973 + AT_rich Low_complexity Low_complexity 1 60 0 9 697 5974 38 1 0 chrUextra 14714485 14715203 -14289453 + NINJA_I LTR Pao 4284 5002 -1009 9 697 2134 198 14 6 chrUextra 14715310 14716021 -14288635 - SAR_DM Satellite Satellite -1022 716 1 9 697 2969 185 26 20 chrUextra 14716121 14716837 -14287819 + SAR_DM Satellite Satellite 391 1111 -361 9 697 843 109 8 15 chrUextra 14716947 14717409 -14287247 - RSP Satellite Satellite -48 459 1 9 697 813 107 5 19 chrUextra 14717449 14717655 -14287001 - RSP Satellite Satellite -1 203 1 9 697 2620 262 1 3 chrUextra 14717758 14718469 -14286187 + ROVER-I_DM LTR Gypsy 3194 3903 -2681 9 697 6511 0 0 0 chrUextra 14718575 14719293 -14285363 + DOC LINE Jockey 1927 2644 -2081 9 697 3164 165 38 17 chrUextra 14720229 14720920 -14283736 + SAR_DM Satellite Satellite 333 1037 -435 9 697 2738 255 4 4 chrUextra 14721029 14721747 -14282909 + ROVER-I_DM LTR Gypsy 3147 3864 -2720 9 697 6456 0 0 1 chrUextra 14721847 14722565 -14282091 + R1_DM LINE R1 1513 2229 -3127 9 697 3314 3 0 0 chrUextra 14722665 14723027 -14281629 - ROO_LTR LTR Pao -66 362 1 9 697 2248 103 65 3 chrUextra 14723496 14723837 -14280819 + Gypsy12_I LTR Gypsy 1193 1554 -3992 9 697 2253 116 0 12 chrUextra 14723844 14724167 -14280489 + Gypsy12_I LTR Gypsy 1503 1821 -3725 9 697 242 135 0 0 chrUextra 14724164 14724201 -14280455 + Gypsy12_I LTR Gypsy 4465 4501 -1045 9 697 6429 1 0 0 chrUextra 14724301 14725019 -14279637 + FW_DM LINE Jockey 1111 1828 -2864 9 697 6429 3 0 1 chrUextra 14725119 14725837 -14278819 + DOC LINE Jockey 1913 2629 -2096 9 697 3035 168 38 14 chrUextra 14725937 14726630 -14278026 - SAR_DM Satellite Satellite -572 900 192 9 697 776 99 0 8 chrUextra 14726533 14726655 -14278001 + ARS406_DM Unknown Unknown 1 121 -232 9 697 28 48 0 0 chrUextra 14727134 14727176 -14277480 + AT_rich Low_complexity Low_complexity 1 42 0 9 697 3221 167 52 18 chrUextra 14727577 14728291 -14276365 + SAR_DM Satellite Satellite 1 737 -203 9 697 3237 179 10 11 chrUextra 14728393 14729109 -14275547 - SAR_DM Satellite Satellite -549 923 209 9 697 6350 1 0 0 chrUextra 14729210 14729927 -14274729 + LSU-rRNA_Dme rRNA rRNA 349 1065 -2835 9 697 895 333 12 10 chrUextra 14730320 14730729 -14273927 - MICROPIA_I LTR Gypsy -622 3854 3347 9 697 3073 194 19 20 chrUextra 14730846 14731563 -14273093 + SAR_DM Satellite Satellite 1 716 -216 9 697 3385 31 121 1 chrUextra 14731663 14732381 -14272275 - PROTOP DNA P -252 853 185 9 697 5596 0 0 38 chrUextra 14732481 14733159 -14271497 - LSU-rRNA_Dme rRNA rRNA -3248 652 1 9 697 1109 15 38 0 chrUextra 14733299 14733432 -14271224 + Invader2_I LTR Gypsy 3069 3206 -1386 9 697 4595 17 15 5 chrUextra 14733421 14734017 -14270639 + Invader2_I LTR Gypsy 3975 4576 -16 9 697 3192 172 30 10 chrUextra 14735759 14736469 -14268187 + SAR_DM Satellite Satellite 332 1055 -417 9 697 5733 35 14 1 chrUextra 14736571 14737289 -14267367 + TRANSIB2 DNA Transib 10 736 -2108 9 697 1449 65 22 49 chrUextra 14737389 14737615 -14267041 - Gypsy12_I LTR Gypsy -5326 220 1 9 697 2826 116 8 51 chrUextra 14737615 14738107 -14266549 - Gypsy12_LTR LTR Gypsy 0 2336 1866 9 697 3388 171 11 13 chrUextra 14738207 14738924 -14265732 - SAR_DM Satellite Satellite -470 1002 287 9 697 5872 4 1 35 chrUextra 14739025 14739743 -14264913 + LSU-rRNA_Dme rRNA rRNA 25 718 -3182 9 697 2694 210 28 46 chrUextra 14739843 14740561 -14264095 + TAHRE LINE telomeric 7168 7872 -2591 9 697 2183 189 53 6 chrUextra 14740661 14741379 -14263277 - SAR_DM Satellite Satellite -942 752 1 9 697 299 342 118 4 chrUextra 14741966 14742195 -14262461 - BLASTOPIA_I LTR Gypsy -1 4480 4226 9 697 262 150 0 0 chrUextra 14742380 14742420 -14262236 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 697 239 125 0 24 chrUextra 14742463 14742504 -14262152 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 697 1378 17 0 22 chrUextra 14742570 14742751 -14261905 + NTS_DM Other Other 25 201 -39 9 697 901 9 0 27 chrUextra 14742803 14742915 -14261741 + NTS_DM Other Other 25 133 -107 9 697 847 10 0 0 chrUextra 14742915 14743014 -14261642 + NTS_DM Other Other 38 136 -104 9 697 34 24 0 0 chrUextra 14743170 14743211 -14261445 + AT_rich Low_complexity Low_complexity 1 41 0 9 697 5738 34 1 0 chrUextra 14743933 14744618 -14260038 - FW_DM LINE Jockey -4006 686 1 9 697 2604 0 0 0 chrUextra 14744754 14745041 -14259615 - QUASIMODO_I LTR Gypsy -5773 287 1 9 697 3835 0 0 5 chrUextra 14745041 14745469 -14259187 - QUASIMODO_LTR LTR Gypsy 0 658 233 9 697 481 16 16 0 chrUextra 14745569 14745630 -14259026 + DM176_LTR LTR Gypsy 446 507 0 9 697 5874 6 3 3 chrUextra 14745630 14746287 -14258369 + LSU-rRNA_Dme rRNA rRNA 917 1573 -2327 9 697 3418 173 4 14 chrUextra 14746388 14747092 -14257564 + SAR_DM Satellite Satellite 405 1101 -371 9 697 2200 193 90 44 chrUextra 14747219 14747919 -14256737 - HETA LINE telomeric -405 5676 4945 9 697 310 158 69 59 chrUextra 14748023 14748124 -14256532 + XDMR_DM Unknown Unknown 259 360 0 9 697 3148 177 10 19 chrUextra 14748038 14748739 -14255917 - SAR_DM Satellite Satellite -353 1119 425 9 697 820 11 0 0 chrUextra 14748841 14748935 -14255721 - NTS_DM Other Other -109 131 38 9 697 907 9 0 27 chrUextra 14748935 14749047 -14255609 - NTS_DM Other Other -107 133 25 9 697 1304 18 0 6 chrUextra 14749099 14749264 -14255392 - NTS_DM Other Other -39 201 38 9 697 881 18 0 27 chrUextra 14749264 14749376 -14255280 - NTS_DM Other Other -107 133 25 9 697 949 23 0 8 chrUextra 14749428 14749559 -14255097 - NTS_DM Other Other -39 201 72 9 697 6445 3 17 0 chrUextra 14749659 14750377 -14254279 - LSU-rRNA_Dme rRNA rRNA -1014 2886 2157 9 697 467 117 106 0 chrUextra 14751297 14751391 -14253265 - ARS406_DM Unknown Unknown -248 105 2 9 697 2931 188 38 13 chrUextra 14751307 14752013 -14252643 + SAR_DM Satellite Satellite 195 918 -554 9 697 2604 17 0 0 chrUextra 14752116 14752411 -14252245 - Copia2_I LTR Copia -751 3411 3117 9 697 22 35 0 0 chrUextra 14752445 14752474 -14252182 + AT_rich Low_complexity Low_complexity 1 29 0 9 697 58 15 0 0 chrUextra 14752649 14752714 -14251942 + AT_rich Low_complexity Low_complexity 1 65 0 9 697 6410 0 1 1 chrUextra 14752933 14753649 -14251007 - R1_DM LINE R1 -3474 1882 1167 9 697 275 93 93 0 chrUextra 14753769 14753823 -14250833 - I_DM LINE I -1028 5203 5145 9 697 5543 19 2 2 chrUextra 14753824 14754467 -14250189 - DMCR1A LINE CR1 0 4470 3828 9 697 2274 64 7 0 chrUextra 14754567 14754863 -14249793 - G5_DM LINE Jockey -587 4269 3972 9 697 21 0 0 0 chrUextra 14754894 14754915 -14249741 + AT_rich Low_complexity Low_complexity 1 21 0 9 697 2980 181 19 16 chrUextra 14755387 14756074 -14248582 - SAR_DM Satellite Satellite -593 879 191 9 697 646 182 0 0 chrUextra 14755977 14756103 -14248553 + ARS406_DM Unknown Unknown 1 126 -227 9 697 6190 4 1 7 chrUextra 14756203 14756921 -14247735 - R1_DM LINE R1 -1227 4129 3416 9 697 5829 13 0 35 chrUextra 14757021 14757739 -14246917 - LSU-rRNA_Dme rRNA rRNA -3096 804 112 9 697 3550 0 0 2 chrUextra 14757839 14758234 -14246422 + ACCORD_LTR LTR Gypsy 165 558 0 9 697 2710 12 3 6 chrUextra 14758234 14758557 -14246099 + ACCORD_I LTR Gypsy 1 322 -5966 9 697 3207 102 241 9 chrUextra 14758657 14759293 -14245363 + TART LINE telomeric 9270 10052 -4425 9 697 246 196 18 0 chrUextra 14759291 14759347 -14245309 + HETA LINE telomeric 3455 3511 -2570 9 697 1323 75 5 0 chrUextra 14759477 14759665 -14244991 - ARS406_DM Unknown Unknown -164 189 1 9 697 2639 161 7 3 chrUextra 14759665 14760189 -14244467 + SAR_DM Satellite Satellite 1 714 -781 9 697 3345 177 8 7 chrUextra 14760295 14761007 -14243649 - SAR_DM Satellite Satellite -593 879 167 9 697 6086 21 6 1 chrUextra 14761111 14761829 -14242827 - R1_DM LINE R1 -1165 4191 3471 9 697 2831 89 10 22 chrUextra 14761952 14762643 -14242013 - DMSAT6 Satellite Satellite 0 683 1 9 697 6407 4 0 0 chrUextra 14762747 14763464 -14241192 - DMRT1B LINE R1 -187 4996 4280 9 697 6449 1 0 1 chrUextra 14763565 14764283 -14240373 + FW_DM LINE Jockey 745 1461 -3231 9 697 1037 0 0 0 chrUextra 14764384 14764499 -14240157 - NTS_DM Other Other -125 115 1 9 697 1930 4 17 13 chrUextra 14764499 14764738 -14239918 - NTS_DM Other Other 0 240 1 9 697 1824 17 17 17 chrUextra 14764738 14764978 -14239678 - NTS_DM Other Other 0 240 1 9 697 774 25 32 32 chrUextra 14764978 14765101 -14239555 - NTS_DM Other Other 0 240 118 9 697 6441 4 0 0 chrUextra 14765201 14765919 -14238737 + ROO_I LTR Pao 5081 5798 -2458 9 697 6446 1 0 0 chrUextra 14766019 14766737 -14237919 - ROO_I LTR Pao -2310 5946 5229 9 697 6299 0 1 1 chrUextra 14766858 14767551 -14237105 - SSU-rRNA_Dme rRNA rRNA 0 1995 1303 9 697 837 81 8 0 chrUextra 14767655 14767778 -14236878 - ARS406_DM Unknown Unknown -229 124 1 9 697 3144 179 9 9 chrUextra 14767682 14768370 -14236286 + SAR_DM Satellite Satellite 192 879 -593 9 697 32 0 0 0 chrUextra 14768663 14768695 -14235961 + AT_rich Low_complexity Low_complexity 1 32 0 9 697 280 29 0 0 chrUextra 14768827 14768861 -14235795 + SSU-rRNA_Dme rRNA rRNA 1 34 -1961 9 697 2788 3 0 6 chrUextra 14768868 14769188 -14235468 + SSU-rRNA_Dme rRNA rRNA 1304 1621 -374 9 697 3327 180 7 8 chrUextra 14770109 14770827 -14233829 + SAR_DM Satellite Satellite 207 923 -549 9 697 2351 56 400 2 chrUextra 14770931 14771383 -14233273 - PROTOP_B DNA P -346 807 176 9 697 726 261 22 19 chrUextra 14771375 14771644 -14233012 + QUASIMODO_I LTR Gypsy 5527 5796 -264 9 697 22 0 0 0 chrUextra 14772342 14772364 -14232292 + AT_rich Low_complexity Low_complexity 1 22 0 9 697 6206 1 1 12 chrUextra 14772563 14773281 -14231375 + DOC LINE Jockey 507 1216 -3509 9 697 4937 0 7 0 chrUextra 14773381 14773934 -14230722 - QUASIMODO_LTR LTR Gypsy -100 558 2 9 697 322 57 38 0 chrUextra 14773934 14773987 -14230669 + (TA)n Simple_repeat Simple_repeat 2 56 0 9 697 21 89 0 0 chrUextra 14775626 14775682 -14228974 + AT_rich Low_complexity Low_complexity 1 56 0 9 697 6133 4 1 0 chrUextra 14775835 14776553 -14228103 - Copia_I LTR Copia -1719 2874 2156 9 697 4093 53 2 4 chrUextra 14776658 14777167 -14227489 + BATUMI_I LTR Pao 3549 4056 -3907 9 697 1227 99 13 2 chrUextra 14777163 14777344 -14227312 + BATUMI_I LTR Pao 4180 4438 -3476 9 697 22 35 0 0 chrUextra 14778569 14778598 -14226058 + AT_rich Low_complexity Low_complexity 1 29 0 9 697 51 31 0 0 chrUextra 14778773 14778838 -14225818 + AT_rich Low_complexity Low_complexity 1 65 0 9 697 3327 181 10 8 chrUextra 14779112 14779824 -14224832 + SAR_DM Satellite Satellite 246 958 -514 9 697 2542 182 31 16 chrUextra 14779925 14780544 -14224112 + SAR_DM Satellite Satellite 449 1076 -396 9 697 441 119 107 0 chrUextra 14780559 14780643 -14224013 + SAR_DM Satellite Satellite 547 639 -833 9 697 1436 15 25 20 chrUextra 14780743 14780942 -14223714 + NTS_DM Other Other 41 240 0 9 697 1835 17 17 17 chrUextra 14780942 14781182 -14223474 + NTS_DM Other Other 1 240 0 9 697 1805 25 17 17 chrUextra 14781182 14781422 -14223234 + NTS_DM Other Other 1 240 0 9 697 339 26 0 0 chrUextra 14781422 14781461 -14223195 + NTS_DM Other Other 1 39 -201 9 697 1194 0 70 0 chrUextra 14781561 14781717 -14222939 + ROO_I LTR Pao 474 640 -7616 9 697 552 130 0 0 chrUextra 14781717 14781809 -14222847 + (CAG)n Simple_repeat Simple_repeat 1 92 0 9 697 4054 0 0 0 chrUextra 14781811 14782279 -14222377 + ROO_I LTR Pao 734 1201 -7055 9 697 261 33 0 0 chrUextra 14782624 14782654 -14222002 + Baggins1 LINE LOA 4727 4756 -697 9 697 741 103 241 0 chrUextra 14782662 14782807 -14221849 - FB4_DM DNA Tc1 -3907 182 3 9 697 486 17 0 0 chrUextra 14783201 14783260 -14221396 + Gypsy12_I LTR Gypsy 5488 5546 0 9 697 2545 199 17 70 chrUextra 14783260 14783915 -14220741 + Gypsy12_LTR LTR Gypsy 1 620 -1716 9 697 5293 27 24 5 chrUextra 14784015 14784675 -14219981 - PROTOP_A DNA P -432 673 1 9 697 4681 27 1 131 chrUextra 14784833 14785551 -14219105 - CIRCE LINE Composite -4357 1999 1375 9 697 6129 29 1 1 chrUextra 14785651 14786369 -14218287 - R1_DM LINE R1 -3310 2046 1329 9 697 6418 8 0 0 chrUextra 14786469 14787187 -14217469 - R1_DM LINE R1 -1546 3810 3093 9 697 6551 0 0 1 chrUextra 14787287 14788005 -14216651 + LSU-rRNA_Dme rRNA rRNA 2679 3395 -505 9 697 1620 12 0 0 chrUextra 14788105 14788355 -14216301 + (TTA)n Simple_repeat Simple_repeat 1 250 0 9 697 663 77 29 188 chrUextra 14788393 14788633 -14216023 - MDG1_I LTR Gypsy 0 6596 6395 9 697 1293 66 0 5 chrUextra 14788626 14788823 -14215833 - MDG1_I LTR Gypsy -392 6204 6009 9 697 1696 40 0 0 chrUextra 14789440 14789641 -14215015 + PROTOP_A DNA P 1 201 -904 9 697 3359 174 10 7 chrUextra 14789753 14790459 -14214197 + SAR_DM Satellite Satellite 326 1033 -439 9 697 6579 1 0 0 chrUextra 14790559 14791277 -14213379 - R2_DM LINE R2 -2094 1513 796 9 697 3009 36 65 4 chrUextra 14791377 14791888 -14212768 + PROTOP_A DNA P 563 1104 -1 9 697 1671 34 0 0 chrUextra 14791889 14792095 -14212561 - DOC3_DM LINE Jockey -1670 3070 2865 9 697 2026 174 20 18 chrUextra 14792217 14792897 -14211759 + SAR_DM Satellite Satellite 1 681 -684 9 697 2186 16 4 11 chrUextra 14793013 14793273 -14211383 + BATUMI_I LTR Pao 6744 7001 -962 9 697 3772 14 0 5 chrUextra 14793299 14793731 -14210925 - BATUMI_I LTR Pao -1543 6420 5991 9 697 3350 3 43 0 chrUextra 14794649 14795365 -14209291 + IDEFIX_I LTR Gypsy 2116 2862 -2766 9 697 6300 1 0 0 chrUextra 14795467 14796185 -14208471 - ROO_I LTR Pao -3210 5046 4329 9 697 4897 25 0 2 chrUextra 14796285 14796848 -14207808 - BEL_I LTR Pao -4841 563 2 9 697 1083 80 0 0 chrUextra 14796852 14797003 -14207653 - BEL_LTR LTR Pao 0 361 211 9 697 3910 94 10 42 chrUextra 14797115 14797821 -14206835 + Gypsy12_I LTR Gypsy 1 738 -4808 9 697 3026 198 13 20 chrUextra 14797921 14798639 -14206017 - SAR_DM Satellite Satellite -629 712 1 9 697 1116 0 0 8 chrUextra 14798739 14798865 -14205791 + DIVER_I LTR Pao 5519 5643 0 9 697 1949 4 0 9 chrUextra 14798865 14799091 -14205565 + DIVER_LTR LTR Pao 1 224 0 9 697 552 7 135 0 chrUextra 14799111 14799407 -14205249 + (TA)n Simple_repeat Simple_repeat 1 336 0 9 697 4864 21 0 120 chrUextra 14799557 14800275 -14204381 - CIRCE LINE Composite -4525 1831 1200 9 697 3437 163 16 10 chrUextra 14800383 14801090 -14203566 + SAR_DM Satellite Satellite 346 1056 -416 9 697 4991 11 1 1 chrUextra 14801197 14801911 -14202745 - DM412B_LTR LTR Gypsy 0 571 1 9 697 233 231 0 0 chrUextra 14802661 14802713 -14201943 - Gypsy7_I LTR Gypsy -1691 3293 3242 9 697 1527 29 23 19 chrUextra 14802883 14803097 -14201559 + NTS_DM Other Other 26 240 0 9 697 593 92 35 0 chrUextra 14803097 14803184 -14201472 + NTS_DM Other Other 1 90 -150 9 697 28 48 0 0 chrUextra 14803457 14803499 -14201157 + AT_rich Low_complexity Low_complexity 1 42 0 9 697 6236 22 0 0 chrUextra 14804465 14805183 -14199473 - DMRT1A LINE R1 -929 4254 3537 9 697 5886 21 0 8 chrUextra 14805283 14806001 -14198655 + IDEFIX_I LTR Gypsy 2831 3542 -2086 9 697 5929 18 70 1 chrUextra 14806101 14806819 -14197837 - FW_DM LINE Jockey -367 4325 3559 9 697 3776 14 0 0 chrUextra 14806919 14807343 -14197313 - Copia2_I LTR Copia -622 3540 3117 9 697 22 35 0 0 chrUextra 14807377 14807406 -14197250 + AT_rich Low_complexity Low_complexity 1 29 0 9 697 49 18 0 0 chrUextra 14807581 14807637 -14197019 + AT_rich Low_complexity Low_complexity 1 56 0 9 697 3521 213 0 0 chrUextra 14807738 14808455 -14196201 + ROVER-I_DM LTR Gypsy 2963 3679 -2905 9 697 2721 187 32 19 chrUextra 14808563 14809273 -14195383 + SAR_DM Satellite Satellite 1 719 -313 9 697 6415 11 0 0 chrUextra 14809373 14810091 -14194565 - DOC2_DM LINE Jockey -712 4081 3364 9 697 1140 315 44 42 chrUextra 14810193 14810892 -14193764 + HMSBEAGLE_I LTR Gypsy 3887 4587 -1942 9 87 5963 25 10 0 chrUextra 14811011 14811727 -14192929 + IDEFIX_I LTR Gypsy 984 1706 -3922 9 698 2829 186 72 14 chrUextra 14811828 14812536 -14192120 + SAR_DM Satellite Satellite 469 1217 -255 9 698 499 34 0 0 chrUextra 14812486 14812545 -14192111 - ARS406_DM Unknown Unknown -164 189 131 9 698 6130 25 1 3 chrUextra 14812645 14813363 -14191293 - R1_DM LINE R1 -145 5211 4495 9 698 600 287 45 53 chrUextra 14813541 14814115 -14190541 - Invader4_I LTR Gypsy -3234 1242 691 9 698 2335 11 0 0 chrUextra 14814282 14814542 -14190114 + R1_DM LINE R1 5095 5354 -2 9 698 3247 62 5 5 chrUextra 14814578 14814999 -14189657 + R1_DM LINE R1 24 444 -4912 9 698 2639 0 0 0 chrUextra 14815099 14815385 -14189271 - ROO_LTR LTR Pao -142 286 1 9 698 3547 5 28 0 chrUextra 14815385 14815817 -14188839 - ROO_I LTR Pao 0 8256 7813 9 698 282 208 0 14 chrUextra 14815917 14815990 -14188666 + DMLTR5 LTR Gypsy 195 266 0 9 698 372 49 65 16 chrUextra 14815989 14816051 -14188605 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 698 259 128 0 21 chrUextra 14816073 14816121 -14188535 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 698 1456 218 9 17 chrUextra 14816736 14817155 -14187501 + DM176_I LTR Gypsy 4566 4981 -1439 9 698 1074 146 0 5 chrUextra 14817158 14817351 -14187305 + DM297_I LTR Gypsy 5490 5681 -486 9 698 377 172 10 88 chrUextra 14817350 14817452 -14187204 + DM176_I LTR Gypsy 6278 6371 -49 9 698 6472 3 0 0 chrUextra 14817553 14818271 -14186385 - R1_DM LINE R1 -2070 3286 2569 9 698 2372 0 0 4 chrUextra 14818371 14818638 -14186018 + DM297_LTR LTR Gypsy 149 414 0 9 698 409 108 0 0 chrUextra 14818653 14818718 -14185938 - PROTOP DNA P -3407 1073 1009 9 698 261 89 0 0 chrUextra 14818719 14818764 -14185892 - PROTOP DNA P -3773 707 663 9 698 1965 71 120 0 chrUextra 14818765 14819089 -14185567 + ROOA_I LTR Pao 5898 6260 -589 9 698 928 0 0 0 chrUextra 14819189 14819291 -14185365 - NTS_DM Other Other -138 102 1 9 698 1926 4 17 13 chrUextra 14819291 14819530 -14185126 - NTS_DM Other Other 0 240 1 9 698 1940 0 17 13 chrUextra 14819530 14819769 -14184887 - NTS_DM Other Other 0 240 1 9 698 966 7 29 22 chrUextra 14819769 14819907 -14184749 - NTS_DM Other Other 0 240 102 9 698 3683 74 50 26 chrUextra 14820059 14820725 -14183931 - PROTOP_A DNA P 0 1153 509 9 698 3405 180 10 8 chrUextra 14820825 14821538 -14183118 + SAR_DM Satellite Satellite 334 1047 -425 9 698 5178 80 67 12 chrUextra 14821643 14822361 -14182295 - Gypsy12_I LTR Gypsy -43 5503 4747 9 698 4783 93 2 5 chrUextra 14822461 14823178 -14181478 + BATUMI_I LTR Pao 4315 5137 -2777 9 698 565 115 287 0 chrUextra 14823279 14823401 -14181255 - FB4_DM DNA Tc1 -3930 159 3 9 698 3479 164 11 8 chrUextra 14824097 14824812 -14179844 - SAR_DM Satellite Satellite -404 1068 352 9 698 6229 26 0 0 chrUextra 14824915 14825633 -14179023 - R1_DM LINE R1 -2973 2383 1666 9 698 3441 177 8 8 chrUextra 14825736 14826450 -14178206 + SAR_DM Satellite Satellite 295 1008 -464 9 698 1538 6 6 0 chrUextra 14826551 14826724 -14177932 - LSU-rRNA_Dme rRNA rRNA -1087 2813 2640 9 698 927 10 0 0 chrUextra 14826722 14826824 -14177832 - R1_DM LINE R1 0 5356 5255 9 698 689 26 0 0 chrUextra 14826824 14826902 -14177754 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2578 9 698 3352 3 0 0 chrUextra 14826901 14827269 -14177387 - R2_DM LINE R2 0 3607 3240 9 698 3132 192 19 26 chrUextra 14827369 14828087 -14176569 - SAR_DM Satellite Satellite -544 712 1 9 698 6045 6 1 0 chrUextra 14828187 14828905 -14175751 + QUASIMODO_I LTR Gypsy 3272 3990 -2070 9 698 189 240 0 0 chrUextra 14829825 14830000 -14174656 + (TTAA)n Simple_repeat Simple_repeat 4 178 0 9 698 216 131 224 0 chrUextra 14830003 14830110 -14174546 + (TTTAG)n Simple_repeat Simple_repeat 3 133 0 9 698 221 232 0 0 chrUextra 14830035 14830104 -14174552 + (TTAA)n Simple_repeat Simple_repeat 3 71 0 9 698 839 0 0 0 chrUextra 14832279 14832371 -14172285 - NTS_DM Other Other -148 92 1 9 698 1940 0 17 13 chrUextra 14832371 14832610 -14172046 - NTS_DM Other Other 0 240 1 9 698 1940 0 17 13 chrUextra 14832610 14832849 -14171807 - NTS_DM Other Other 0 240 1 9 698 916 28 28 28 chrUextra 14832849 14832994 -14171662 - NTS_DM Other Other 0 240 96 9 698 1620 0 0 0 chrUextra 14833911 14834174 -14170482 + (CACAA)n Simple_repeat Simple_repeat 1 263 0 9 698 3683 2 0 2 chrUextra 14834179 14834582 -14170074 - STALKER4_LTR LTR Gypsy 0 402 1 9 698 372 22 22 0 chrUextra 14834582 14834628 -14170028 - STALKER4_I LTR Gypsy 0 6530 6484 9 698 936 9 0 27 chrUextra 14834776 14834888 -14169768 + NTS_DM Other Other 25 133 -107 9 698 1350 18 0 6 chrUextra 14834888 14835053 -14169603 + NTS_DM Other Other 38 201 -39 9 698 936 9 0 27 chrUextra 14835105 14835217 -14169439 + NTS_DM Other Other 25 133 -107 9 698 1350 18 0 6 chrUextra 14835217 14835382 -14169274 + NTS_DM Other Other 38 201 -39 9 698 23 54 0 0 chrUextra 14835547 14835584 -14169072 + AT_rich Low_complexity Low_complexity 1 37 0 9 698 936 9 0 27 chrUextra 14835610 14835722 -14168934 + NTS_DM Other Other 25 133 -107 9 698 1350 18 0 6 chrUextra 14835722 14835887 -14168769 + NTS_DM Other Other 38 201 -39 9 698 21 57 0 0 chrUextra 14835887 14835922 -14168734 + AT_rich Low_complexity Low_complexity 1 35 0 9 698 898 9 9 27 chrUextra 14835948 14836059 -14168597 + NTS_DM Other Other 25 133 -107 9 698 876 0 0 0 chrUextra 14836059 14836155 -14168501 + NTS_DM Other Other 38 133 -107 9 698 881 28 0 0 chrUextra 14836155 14836262 -14168394 + NTS_DM Other Other 38 144 -96 9 698 5778 38 48 4 chrUextra 14836362 14837078 -14167578 + G2_DM LINE Jockey 837 1583 -1519 9 698 5944 31 1 10 chrUextra 14837998 14838713 -14165943 - BATUMI_I LTR Pao -4389 3574 2866 9 698 3575 244 39 22 chrUextra 14838813 14840347 -14164309 + SAR_DM Satellite Satellite 1 1560 -216 9 698 2486 54 0 0 chrUextra 14840793 14841091 -14163565 - PROTOP DNA P 0 4480 4183 9 698 3232 58 116 19 chrUextra 14841265 14841981 -14162675 + BATUMI_I LTR Pao 1010 1794 -6169 9 698 3025 179 40 8 chrUextra 14842081 14842798 -14161858 - SAR_DM Satellite Satellite -621 739 1 9 698 6694 1 0 0 chrUextra 14842898 14843615 -14161041 - Gypsy6_I LTR Gypsy -412 6600 5884 9 698 2297 159 39 8 chrUextra 14843821 14844303 -14160353 + SAR_DM Satellite Satellite 425 921 -551 9 698 198 0 0 160 chrUextra 14844534 14844703 -14159953 + (TCTTG)n Simple_repeat Simple_repeat 2 143 0 9 698 1747 174 18 7 chrUextra 14845350 14846066 -14158590 - SAR_DM Satellite Satellite -563 724 1 9 698 3238 167 20 56 chrUextra 14846166 14846882 -14157774 - SAR_DM Satellite Satellite -1092 690 1 9 698 467 18 18 0 chrUextra 14846983 14847038 -14157618 - NTS_DM Other Other -184 56 1 9 698 1899 17 17 17 chrUextra 14847038 14847278 -14157378 - NTS_DM Other Other 0 240 1 9 698 1899 17 17 17 chrUextra 14847278 14847518 -14157138 - NTS_DM Other Other 0 240 1 9 698 1319 17 22 22 chrUextra 14847518 14847700 -14156956 - NTS_DM Other Other 0 240 59 9 698 5531 52 14 1 chrUextra 14847801 14848517 -14156139 + IDEFIX_I LTR Gypsy 4318 5042 -586 9 698 408 70 18 0 chrUextra 14849117 14849174 -14155482 + BARI1 DNA Tc1 37 94 -1656 9 698 810 118 63 44 chrUextra 14849175 14849334 -14155322 - Gypsy12A_LTR LTR Gypsy -1695 585 424 9 698 5408 69 0 13 chrUextra 14849434 14850151 -14154505 + R1_DM LINE R1 194 901 -4455 9 698 4987 41 50 45 chrUextra 14850251 14850967 -14153689 + PROTOP_A DNA P 40 759 -346 9 698 6519 3 0 1 chrUextra 14851068 14851785 -14152871 + DMRT1A LINE R1 3845 4560 -623 9 698 6424 14 1 0 chrUextra 14851885 14852602 -14152054 - DM1731_I LTR Copia -2766 1210 493 9 698 5947 11 1 1 chrUextra 14852702 14853419 -14151237 - DM297_I LTR Gypsy -20 6147 5431 9 698 6484 7 0 1 chrUextra 14853519 14854236 -14150420 + DOC LINE Jockey 2615 3330 -1395 9 698 281 331 41 41 chrUextra 14855561 14855860 -14148796 - BLASTOPIA_I LTR Gypsy -703 4185 3608 9 698 484 34 17 0 chrUextra 14855970 14856029 -14148627 - DIVER_I LTR Pao -5583 60 1 9 698 1018 117 0 24 chrUextra 14856130 14856297 -14148359 - DIVER_LTR LTR Pao -61 163 1 9 698 3324 44 0 0 chrUextra 14856297 14856687 -14147969 - DIVER_I LTR Pao 0 5643 5254 9 698 534 119 36 0 chrUextra 14857002 14857086 -14147570 - NTS_DM Other Other -150 90 4 9 698 1401 6 0 18 chrUextra 14857196 14857361 -14147295 - NTS_DM Other Other -78 162 1 9 698 1031 14 28 21 chrUextra 14857361 14857504 -14147152 - NTS_DM Other Other 0 240 97 9 698 635 96 3 19 chrUextra 14857604 14857716 -14146940 - DMRT1B LINE R1 -5110 73 1 9 698 3116 47 59 0 chrUextra 14857893 14858300 -14146356 - DOC3_DM LINE Jockey -2950 1790 1360 9 698 6031 26 3 0 chrUextra 14858421 14859138 -14145518 + DMRT1B LINE R1 415 1133 -4050 9 698 1258 75 0 56 chrUextra 14859238 14859506 -14145150 - DMSAT6 Satellite Satellite -69 401 149 9 698 1492 88 15 0 chrUextra 14859509 14859713 -14144943 + Gypsy8_I LTR Gypsy 274 480 -3867 9 698 509 240 112 8 chrUextra 14859702 14859950 -14144706 + Gypsy8_I LTR Gypsy 1857 2085 -4568 9 698 6197 21 1 1 chrUextra 14860055 14860772 -14143884 + R1_DM LINE R1 3484 4200 -1156 9 698 22 56 0 0 chrUextra 14860992 14861028 -14143628 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 374 178 50 101 chrUextra 14861073 14861192 -14143464 + Copia_I LTR Copia 4401 4513 -80 9 698 2397 239 75 12 chrUextra 14861691 14862381 -14142275 - Gypsy4_I LTR Gypsy -3472 2816 2083 9 698 21 89 0 0 chrUextra 14862809 14862865 -14141791 + AT_rich Low_complexity Low_complexity 1 56 0 9 698 3099 6 6 0 chrUextra 14862884 14863223 -14141433 - SSU-rRNA_Dme rRNA rRNA 0 1995 1655 9 698 2386 114 24 10 chrUextra 14863323 14864040 -14140616 - DMSAT6 Satellite Satellite -30 726 1 9 698 1079 22 7 7 chrUextra 14864140 14864278 -14140378 - NTS_DM Other Other -65 175 38 9 698 906 9 0 35 chrUextra 14864278 14864391 -14140265 - NTS_DM Other Other -107 133 25 9 698 1350 18 0 6 chrUextra 14864443 14864608 -14140048 - NTS_DM Other Other -39 201 38 9 698 936 9 0 27 chrUextra 14864608 14864720 -14139936 - NTS_DM Other Other -107 133 25 9 698 22 56 0 0 chrUextra 14864746 14864782 -14139874 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 268 176 0 19 chrUextra 14864795 14864847 -14139809 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 6309 29 1 0 chrUextra 14864957 14865674 -14138982 - DMCR1A LINE CR1 -2916 1554 837 9 698 6479 10 1 0 chrUextra 14865774 14866491 -14138165 + Invader1_I LTR Gypsy 2454 3171 -15 9 698 5215 52 1 52 chrUextra 14866591 14867308 -14137348 + BATUMI_I LTR Pao 2312 2992 -4971 9 698 396 22 0 0 chrUextra 14867408 14867453 -14137203 - NTS_DM Other Other -158 82 38 9 698 876 0 0 0 chrUextra 14867453 14867549 -14137107 - NTS_DM Other Other -107 133 38 9 698 898 9 9 27 chrUextra 14867549 14867660 -14136996 - NTS_DM Other Other -107 133 25 9 698 21 57 0 0 chrUextra 14867686 14867721 -14136935 + AT_rich Low_complexity Low_complexity 1 35 0 9 698 1350 18 0 6 chrUextra 14867721 14867886 -14136770 - NTS_DM Other Other -39 201 38 9 698 936 9 0 27 chrUextra 14867886 14867998 -14136658 - NTS_DM Other Other -107 133 25 9 698 496 41 0 14 chrUextra 14868051 14868125 -14136531 - NTS_DM Other Other -39 201 129 9 698 34 24 0 0 chrUextra 14868422 14868463 -14136193 + AT_rich Low_complexity Low_complexity 1 41 0 9 698 21 95 0 0 chrUextra 14868676 14868739 -14135917 + AT_rich Low_complexity Low_complexity 1 63 0 9 698 1684 0 16 0 chrUextra 14868751 14868942 -14135714 + LSU-rRNA_Dme rRNA rRNA 1 194 -3706 9 698 6504 3 1 4 chrUextra 14869042 14869759 -14134897 + LSU-rRNA_Dme rRNA rRNA 692 1406 -2494 9 698 6260 14 6 4 chrUextra 14869859 14870576 -14134080 + QUASIMODO_I LTR Gypsy 2571 3288 -2772 9 698 1006 0 0 0 chrUextra 14870678 14870789 -14133867 + BARI_DM DNA Tc1 1617 1727 -1 9 698 5605 0 0 0 chrUextra 14870789 14871393 -14133263 + BARI_DM DNA Tc1 4 607 -1121 9 698 1850 58 0 0 chrUextra 14871927 14872153 -14132503 + PROTOP DNA P 74 299 -4181 9 698 479 29 43 0 chrUextra 14872140 14872209 -14132447 + PROTOP DNA P 522 593 -3887 9 698 6167 21 1 3 chrUextra 14872310 14873027 -14131629 + R1_DM LINE R1 3696 4411 -945 9 698 6674 0 1 1 chrUextra 14873127 14873844 -14130812 - LSU-rRNA_Dme rRNA rRNA -40 3860 3144 9 698 6265 18 21 0 chrUextra 14873944 14874661 -14129995 + DOC2_DM LINE Jockey 2228 2959 -1834 9 698 6337 14 0 0 chrUextra 14874761 14875478 -14129178 - DMRT1B LINE R1 -2110 3073 2357 9 698 6244 26 1 0 chrUextra 14875578 14876295 -14128361 + R1_DM LINE R1 4211 4928 -428 9 698 6620 1 0 0 chrUextra 14876395 14877112 -14127544 - DMRT1B LINE R1 -1114 4069 3353 9 698 511 0 0 0 chrUextra 14877212 14877267 -14127389 - NTS_DM Other Other -148 92 38 9 698 936 9 0 27 chrUextra 14877267 14877379 -14127277 - NTS_DM Other Other -107 133 25 9 698 22 56 0 0 chrUextra 14877406 14877442 -14127214 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 278 176 0 19 chrUextra 14877455 14877507 -14127149 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 268 196 0 19 chrUextra 14877538 14877590 -14127066 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 250 216 0 19 chrUextra 14877630 14877682 -14126974 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 268 196 0 19 chrUextra 14877722 14877774 -14126882 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 27 0 0 0 chrUextra 14877776 14877803 -14126853 + AT_rich Low_complexity Low_complexity 1 27 0 9 698 505 0 0 0 chrUextra 14877875 14877929 -14126727 - LSU-rRNA_Dme rRNA rRNA 0 3900 3847 9 698 1718 299 15 14 chrUextra 14878086 14878738 -14125918 + HMSBEAGLE_I LTR Gypsy 2873 3525 -3004 9 698 6510 3 0 0 chrUextra 14878846 14879563 -14125093 + LSU-rRNA_Dme rRNA rRNA 339 1055 -2845 9 698 6678 0 1 1 chrUextra 14879663 14880380 -14124276 - LSU-rRNA_Dme rRNA rRNA -246 3654 2938 9 698 260 200 0 20 chrUextra 14880480 14880531 -14124125 - LSU-rRNA_Dme rRNA rRNA -1281 2619 2570 9 698 5276 2 0 0 chrUextra 14880635 14881197 -14123459 - LSU-rRNA_Dme rRNA rRNA -2 3898 3337 9 698 6475 8 8 0 chrUextra 14881297 14882014 -14122642 - Copia2_I LTR Copia -2761 1401 679 9 698 6470 10 4 0 chrUextra 14882114 14882831 -14121825 - Gypsy4_I LTR Gypsy -3137 3151 2432 9 698 5110 19 3 43 chrUextra 14882931 14883551 -14121105 - CIRCE LINE Composite -5761 595 1 9 698 832 31 0 0 chrUextra 14883551 14883648 -14121008 - CIRCE LINE Composite 0 6356 6260 9 698 6152 25 3 1 chrUextra 14883748 14884465 -14120191 + R1_DM LINE R1 3592 4309 -1047 9 698 6249 8 0 0 chrUextra 14884565 14885282 -14119374 - DM297_I LTR Gypsy -1331 4836 4120 9 698 6214 10 0 0 chrUextra 14885382 14886099 -14118557 - R1_DM LINE R1 -4272 1084 368 9 698 338 231 18 44 chrUextra 14886199 14886312 -14118344 + HETRP_DM Satellite Satellite 1573 1682 -190 9 698 724 194 11 68 chrUextra 14886442 14886619 -14118037 + HETRP_DM Satellite Satellite 1518 1684 -188 9 698 733 188 13 25 chrUextra 14886741 14886899 -14117757 + HETRP_DM Satellite Satellite 1529 1684 -188 9 698 4181 28 96 3 chrUextra 14887017 14887733 -14116923 - ROOA_I LTR Pao -595 6254 5472 9 698 6177 18 25 0 chrUextra 14887833 14888550 -14116106 - R1_DM LINE R1 -3072 2284 1550 9 698 5422 25 7 14 chrUextra 14888650 14889367 -14115289 + Gypsy12_LTR LTR Gypsy 1301 2012 -324 9 698 3826 38 152 0 chrUextra 14889467 14890184 -14114472 + R1_DM LINE R1 1190 2015 -3341 9 698 6244 1 0 1 chrUextra 14890284 14891001 -14113655 + LSU-rRNA_Dme rRNA rRNA 2709 3424 -476 9 698 6203 1 0 0 chrUextra 14891101 14891818 -14112838 + DOC LINE Jockey 2803 3519 -1206 9 698 686 169 144 5 chrUextra 14891918 14892126 -14112530 + TART_B1 LINE telomeric 1436 1672 -8982 9 698 3874 51 2 0 chrUextra 14892125 14892635 -14112021 + TART LINE telomeric 1823 2333 -12144 9 698 1561 195 14 7 chrUextra 14892735 14893449 -14111207 - SAR_DM Satellite Satellite -702 718 1 9 698 1627 217 60 60 chrUextra 14893646 14894260 -14110396 + Gypsy12_LTR LTR Gypsy 831 1444 -892 9 698 2021 208 17 45 chrUextra 14894371 14894904 -14109752 - Gypsy12_LTR LTR Gypsy -1818 518 1 9 698 407 273 0 0 chrUextra 14894904 14895026 -14109630 - DM297_I LTR Gypsy -2709 3458 3337 9 698 345 98 0 0 chrUextra 14895033 14895084 -14109572 - Gypsy12_I LTR Gypsy -4570 976 926 9 698 2330 231 31 37 chrUextra 14895188 14895898 -14108758 - ROVER-I_DM LTR Gypsy -4175 2409 1704 9 698 5671 7 1 1 chrUextra 14896003 14896688 -14107968 - G6_DM LINE Jockey -1357 685 1 9 698 4972 92 1 0 chrUextra 14896820 14897536 -14107120 + S_DM DNA Tc1 345 1061 -675 9 698 2956 164 49 25 chrUextra 14897637 14898352 -14106304 - SAR_DM Satellite Satellite -372 1100 369 9 698 464 262 0 0 chrUextra 14898699 14898821 -14105835 + BS LINE Jockey 1981 2102 -3024 9 698 302 276 0 0 chrUextra 14899003 14899101 -14105555 + BS LINE Jockey 2077 2174 -2952 9 698 267 122 0 0 chrUextra 14899130 14899171 -14105485 + HMSBEAGLE_I LTR Gypsy 3783 3823 -2706 9 698 5624 6 152 0 chrUextra 14899271 14899988 -14104668 + Gypsy_I LTR Gypsy 34 859 -5648 9 698 495 184 357 0 chrUextra 14900089 14900316 -14104340 + PROTOP DNA P 3973 4280 -200 9 698 314 299 102 10 chrUextra 14900442 14900638 -14104018 - MICROPIA_I LTR Gypsy -626 3850 3668 9 698 275 296 0 0 chrUextra 14900724 14900805 -14103851 - MICROPIA_I LTR Gypsy -682 3794 3714 9 698 5734 34 0 0 chrUextra 14900905 14901622 -14103034 + R1_DM LINE R1 2367 3083 -2273 9 698 5998 1 0 0 chrUextra 14901722 14902439 -14102217 - DM176_I LTR Gypsy -4062 2358 1642 9 698 5795 11 3 0 chrUextra 14902539 14903256 -14101400 - STALKER4_I LTR Gypsy -2980 3550 2832 9 698 503 136 68 0 chrUextra 14904994 14905141 -14099515 + GA-rich Low_complexity Low_complexity 1 157 0 9 698 6079 15 1 0 chrUextra 14905807 14906524 -14098132 - DIVER_I LTR Pao -2632 3011 2294 9 698 45 0 0 0 chrUextra 14907666 14907711 -14096945 + AT_rich Low_complexity Low_complexity 1 45 0 9 698 2748 85 2 7 chrUextra 14908259 14908687 -14095969 + CIRCE LINE Composite 4555 4980 -1376 9 698 6099 3 0 0 chrUextra 14909075 14909792 -14094864 - STALKER4_I LTR Gypsy -3678 2852 2136 9 698 374 247 10 112 chrUextra 14909892 14910196 -14094460 - Gypsy12_LTR LTR Gypsy -1662 674 402 9 698 3147 23 5 8 chrUextra 14910219 14910609 -14094047 - PROTOP_A DNA P 0 1105 717 9 698 6179 1 0 0 chrUextra 14910709 14911426 -14093230 - ROO_I LTR Pao -381 7875 7159 9 698 1099 76 17 0 chrUextra 14911526 14911686 -14092970 - IDEFIX_I LTR Gypsy -135 5493 5331 9 698 2692 36 0 0 chrUextra 14911686 14912022 -14092634 - DM1731_LTR LTR Copia 0 336 1 9 698 1809 0 0 23 chrUextra 14912022 14912243 -14092413 - DM1731_I LTR Copia 0 3976 3761 9 698 6074 6 0 0 chrUextra 14912343 14913060 -14091596 - DMRT1A LINE R1 -3515 1668 952 9 698 343 264 0 0 chrUextra 14913257 14913348 -14091308 + Copia2_I LTR Copia 567 657 -3505 9 698 3780 9 0 0 chrUextra 14913434 14913877 -14090779 + Copia2_I LTR Copia 152 594 -3568 9 698 207 69 0 0 chrUextra 14913978 14914007 -14090649 + (TC)n Simple_repeat Simple_repeat 2 30 0 9 698 668 179 7 14 chrUextra 14914138 14914280 -14090376 - HETRP_DM Satellite Satellite -203 1669 1529 9 698 655 186 7 14 chrUextra 14914420 14914562 -14090094 - HETRP_DM Satellite Satellite -203 1669 1529 9 698 3043 182 8 10 chrUextra 14914800 14915510 -14089146 - SAR_DM Satellite Satellite -569 903 195 9 698 2704 172 11 8 chrUextra 14915611 14916225 -14088431 + SAR_DM Satellite Satellite 288 903 -569 9 698 794 20 0 0 chrUextra 14916137 14916235 -14088421 - ARS406_DM Unknown Unknown -166 187 90 9 698 635 62 10 0 chrUextra 14916232 14916328 -14088328 - ARS406_DM Unknown Unknown -195 158 62 9 698 6068 13 0 0 chrUextra 14916431 14917145 -14087511 - FW_DM LINE Jockey -425 4267 3554 9 698 720 251 58 3 chrUextra 14917246 14917558 -14087098 + DM297_I LTR Gypsy 5370 5698 -469 9 698 908 144 134 49 chrUextra 14917546 14917852 -14086804 - STALKER4_I LTR Gypsy -5373 1157 826 9 698 470 186 35 0 chrUextra 14917849 14917962 -14086694 + DM297_I LTR Gypsy 4336 4452 -1715 9 698 5908 7 1 1 chrUextra 14918062 14918779 -14085877 + STALKER4_I LTR Gypsy 5457 6173 -357 9 698 32 0 0 0 chrUextra 14919094 14919126 -14085530 + AT_rich Low_complexity Low_complexity 1 32 0 9 698 2945 3 0 0 chrUextra 14919258 14919596 -14085060 + SSU-rRNA_Dme rRNA rRNA 1 338 -1657 9 698 1759 276 31 41 chrUextra 14919696 14920411 -14084245 + MAX_I LTR Pao 6520 7227 -687 9 698 4301 17 7 11 chrUextra 14919865 14920413 -14084243 - BATUMI_I LTR Pao -962 7001 6456 9 698 1737 281 29 40 chrUextra 14920513 14921230 -14083426 - MAX_I LTR Pao -684 7230 6522 9 698 372 186 9 29 chrUextra 14922147 14922252 -14082404 + XDMR_DM Unknown Unknown 258 360 0 9 698 2827 180 10 23 chrUextra 14922166 14922864 -14081792 - SAR_DM Satellite Satellite -354 1118 430 9 698 1927 4 4 0 chrUextra 14922964 14923193 -14081463 + R1_DM LINE R1 4837 5066 -290 9 698 888 27 27 0 chrUextra 14923190 14923301 -14081355 + R1_DM LINE R1 5243 5356 0 9 698 1190 66 6 0 chrUextra 14923334 14923501 -14081155 + R1_DM LINE R1 1 168 -5188 9 698 1346 55 0 0 chrUextra 14923499 14923681 -14080975 + R1_DM LINE R1 638 819 -4537 9 698 1608 44 0 0 chrUextra 14923781 14923987 -14080669 + DM1731_LTR LTR Copia 131 336 0 9 698 4411 2 2 0 chrUextra 14923987 14924498 -14080158 + DM1731_I LTR Copia 1 512 -3464 9 698 1703 21 17 17 chrUextra 14924598 14924835 -14079821 + NTS_DM Other Other 4 240 0 9 698 1850 4 17 13 chrUextra 14924835 14925074 -14079582 + NTS_DM Other Other 1 240 0 9 698 1824 0 21 13 chrUextra 14925074 14925312 -14079344 + NTS_DM Other Other 1 240 0 9 698 926 34 0 0 chrUextra 14925415 14925532 -14079124 - FW_DM LINE Jockey -4575 117 1 9 698 4750 32 0 3 chrUextra 14925540 14926132 -14078524 + R1_DM LINE R1 1377 1966 -3390 9 698 5880 11 0 13 chrUextra 14926232 14926949 -14077707 - QUASIMODO_I LTR Gypsy -5114 946 239 9 698 5307 29 0 0 chrUextra 14927049 14927698 -14076958 - DMCR1A LINE CR1 -1422 3048 2400 9 698 320 120 0 0 chrUextra 14927715 14927765 -14076891 - Invader3_LTR LTR Gypsy -155 143 94 9 698 5196 49 0 28 chrUextra 14927866 14928583 -14076073 - R1_DM LINE R1 -4446 910 214 9 698 1411 25 56 0 chrUextra 14928719 14928915 -14075741 + FW_DM LINE Jockey 4486 4692 0 9 698 254 29 0 0 chrUextra 14928921 14928955 -14075701 - R1_DM LINE R1 -3966 1390 1357 9 698 3439 36 2 5 chrUextra 14928955 14929400 -14075256 - R1_DM LINE R1 -4150 1206 763 9 698 6160 0 0 0 chrUextra 14929500 14930217 -14074439 - ROO_I LTR Pao -3424 4832 4116 9 698 744 11 0 11 chrUextra 14930317 14930410 -14074246 + R1_DM LINE R1 3565 3656 -1700 9 698 3198 48 1 14 chrUextra 14930410 14930849 -14073807 - STALKER4_LTR LTR Gypsy -3 399 1 9 698 1416 5 5 0 chrUextra 14930849 14931034 -14073622 - STALKER4_I LTR Gypsy 0 6530 6345 9 698 2074 24 0 0 chrUextra 14931135 14931388 -14073268 - DM1731_LTR LTR Copia -83 253 1 9 698 3867 2 7 11 chrUextra 14931388 14931851 -14072805 - DM1731_I LTR Copia 0 3976 3516 9 698 2061 41 4 25 chrUextra 14931951 14932228 -14072428 + G5A_DM LINE Jockey 2568 2838 -3 9 698 533 267 131 20 chrUextra 14932254 14932506 -14072150 - Gypsy7_I LTR Gypsy -3317 1667 1388 9 698 300 0 0 0 chrUextra 14932631 14932668 -14071988 - PROTOP_B DNA P 0 1153 1117 9 698 2510 0 0 0 chrUextra 14932768 14933055 -14071601 - FW_DM LINE Jockey -4405 287 1 9 698 1744 184 10 10 chrUextra 14933074 14933479 -14071177 + SAR_DM Satellite Satellite 499 903 -569 9 698 2746 6 0 3 chrUextra 14933585 14933930 -14070726 - QUASIMODO_I LTR Gypsy -4910 1150 807 9 698 2973 8 3 3 chrUextra 14933948 14934302 -14070354 - QUASIMODO_LTR LTR Gypsy 0 658 305 9 698 6176 1 0 0 chrUextra 14934402 14935119 -14069537 + DM176_I LTR Gypsy 2481 3197 -3223 9 698 1565 3 10 7 chrUextra 14935288 14935607 -14069049 + (CAAAA)n Simple_repeat Simple_repeat 1 320 0 9 698 4937 0 2 0 chrUextra 14936036 14936599 -14068057 + LSU-rRNA_Dme rRNA rRNA 3337 3900 0 9 698 22 56 0 0 chrUextra 14936671 14936707 -14067949 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 246 150 0 0 chrUextra 14936712 14936752 -14067904 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 698 1117 237 176 8 chrUextra 14937044 14937557 -14067099 + BS LINE Jockey 2021 2619 -2507 9 698 1738 222 43 45 chrUextra 14937683 14938387 -14066269 + SAR_DM Satellite Satellite 372 1073 -399 9 698 1284 7 0 0 chrUextra 14938487 14938632 -14066024 + (AATAG)n Simple_repeat Simple_repeat 4 148 0 9 698 861 110 90 0 chrUextra 14938640 14938785 -14065871 - Copia2_LTR_DM LTR Copia 0 198 41 9 698 708 102 0 23 chrUextra 14938798 14938928 -14065728 - Copia2_I LTR Copia 0 4162 4036 9 698 259 132 0 29 chrUextra 14938928 14938998 -14065658 + A-rich Low_complexity Low_complexity 5 72 0 9 698 1485 23 0 0 chrUextra 14939027 14939204 -14065452 + (AATAG)n Simple_repeat Simple_repeat 1 177 0 9 698 470 26 37 73 chrUextra 14939305 14939387 -14065269 + PROTOP DNA P 508 586 -3894 9 698 1138 58 51 11 chrUextra 14939406 14939582 -14065074 + PROTOP DNA P 4162 4344 -136 9 698 26 30 0 0 chrUextra 14939873 14939906 -14064750 + AT_rich Low_complexity Low_complexity 1 33 0 9 698 6108 11 3 0 chrUextra 14940121 14940838 -14063818 - TART_B1 LINE telomeric -1793 8861 8143 9 698 1360 80 44 27 chrUextra 14941757 14942016 -14062640 - R1_DM LINE R1 -5055 301 1 9 698 433 55 0 0 chrUextra 14942016 14942071 -14062585 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 9 87 3417 15 0 0 chrUextra 14942067 14942472 -14062184 - R2_DM LINE R2 -3 3604 3200 9 699 6050 3 0 0 chrUextra 14942572 14943289 -14061367 + ROO_I LTR Pao 4224 4940 -3316 9 699 245 125 46 15 chrUextra 14944247 14944312 -14060344 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 699 22 35 0 0 chrUextra 14944506 14944535 -14060121 + AT_rich Low_complexity Low_complexity 1 29 0 9 699 62 26 0 0 chrUextra 14944828 14944904 -14059752 + AT_rich Low_complexity Low_complexity 1 76 0 9 699 819 215 0 5 chrUextra 14945029 14945239 -14059417 - SAR_DM Satellite Satellite -768 704 496 9 699 994 95 0 0 chrUextra 14945089 14945247 -14059409 + ARS406_DM Unknown Unknown 1 158 -195 9 699 2315 166 14 6 chrUextra 14945254 14945740 -14058916 - SAR_DM Satellite Satellite -569 903 414 9 699 753 11 0 31 chrUextra 14945840 14945937 -14058719 - NTS_DM Other Other -122 118 25 9 699 1252 18 0 6 chrUextra 14945989 14946154 -14058502 - NTS_DM Other Other -39 201 38 9 699 870 9 0 27 chrUextra 14946154 14946266 -14058390 - NTS_DM Other Other -107 133 25 9 699 22 56 0 0 chrUextra 14946292 14946328 -14058328 + AT_rich Low_complexity Low_complexity 1 36 0 9 699 255 125 0 0 chrUextra 14946341 14946381 -14058275 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 246 150 0 0 chrUextra 14946424 14946464 -14058192 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 246 150 0 0 chrUextra 14946516 14946556 -14058100 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 2712 178 22 31 chrUextra 14946659 14947371 -14057285 - SAR_DM Satellite Satellite -318 1154 449 9 699 640 137 0 0 chrUextra 14947474 14947576 -14057080 + TART LINE telomeric 3904 4005 -10472 9 699 2551 134 12 81 chrUextra 14947613 14948191 -14056465 + TART LINE telomeric 6655 7149 -7328 9 699 5401 3 95 0 chrUextra 14948291 14949006 -14055650 + FW_DM LINE Jockey 2985 3767 -925 9 699 1540 92 0 4 chrUextra 14949108 14949360 -14055296 + STALKER4_I LTR Gypsy 5925 6175 -355 9 699 2935 27 0 5 chrUextra 14949355 14949733 -14054923 + NINJA_I LTR Pao 5636 6011 0 9 699 583 12 11 76 chrUextra 14949733 14949825 -14054831 + NINJA_LTR LTR Pao 1 86 -231 9 699 6030 8 7 0 chrUextra 14950742 14951459 -14053197 - DM176_I LTR Gypsy -1830 4590 3869 9 699 2668 190 14 16 chrUextra 14951559 14952276 -14052380 + SAR_DM Satellite Satellite 1 715 -300 9 699 1772 14 0 0 chrUextra 14952376 14952599 -14052057 + IDEFIX_I LTR Gypsy 4446 4668 -960 9 699 3848 20 0 0 chrUextra 14952598 14953093 -14051563 + IDEFIX_I LTR Gypsy 4775 5269 -359 9 699 3034 190 7 8 chrUextra 14953193 14953910 -14050746 + SAR_DM Satellite Satellite 198 913 -559 9 699 3320 38 2 0 chrUextra 14954010 14954429 -14050227 - R1_DM LINE R1 -530 4826 4407 9 699 2358 4 0 0 chrUextra 14954449 14954727 -14049929 - R1_DM LINE R1 -1074 4282 4005 9 699 21 0 0 0 chrUextra 14955185 14955206 -14049450 + AT_rich Low_complexity Low_complexity 1 21 0 9 699 1836 8 17 13 chrUextra 14955685 14955924 -14048732 + NTS_DM Other Other 1 240 0 9 699 1850 4 17 13 chrUextra 14955924 14956163 -14048493 + NTS_DM Other Other 1 240 0 9 699 1634 5 0 0 chrUextra 14956163 14956361 -14048295 + NTS_DM Other Other 1 198 -42 9 699 2837 189 18 24 chrUextra 14956465 14957178 -14047478 + SAR_DM Satellite Satellite 1 708 -208 9 699 350 149 10 147 chrUextra 14957541 14957643 -14047013 - DNAREP1_DM LINE Penelope -6 588 501 9 699 1085 50 12 6 chrUextra 14957647 14957809 -14046847 + S2_DM DNA Tc1 1 163 -1572 9 699 314 173 0 58 chrUextra 14957835 14957921 -14046735 - DNAREP1_DM LINE Penelope -26 568 488 9 699 2692 214 47 18 chrUextra 14958095 14958812 -14045844 + Stalker2_I LTR Gypsy 5150 5887 -1515 9 699 3077 175 7 10 chrUextra 14958922 14959625 -14045031 + SAR_DM Satellite Satellite 195 895 -577 9 699 5954 1 0 3 chrUextra 14959729 14960446 -14044210 + ROO_I LTR Pao 2935 3649 -4607 9 699 6129 3 0 0 chrUextra 14960546 14961263 -14043393 + DMRT1B LINE R1 2334 3050 -2133 9 699 2642 188 29 22 chrUextra 14961363 14962079 -14042577 + SAR_DM Satellite Satellite 1 720 -216 9 699 2832 0 3 0 chrUextra 14962180 14962504 -14042152 + SSU-rRNA_Dme rRNA rRNA 1671 1995 0 9 699 21 89 0 0 chrUextra 14962523 14962579 -14042077 + AT_rich Low_complexity Low_complexity 1 56 0 9 699 2463 184 11 32 chrUextra 14963814 14964490 -14040166 - SAR_DM Satellite Satellite -1033 662 1 9 699 1930 0 0 0 chrUextra 14965477 14965699 -14038957 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 699 21 95 0 0 chrUextra 14965711 14965774 -14038882 + AT_rich Low_complexity Low_complexity 1 63 0 9 699 34 24 0 0 chrUextra 14965987 14966028 -14038628 + AT_rich Low_complexity Low_complexity 1 41 0 9 699 5867 14 3 3 chrUextra 14966261 14966977 -14037679 - R1_DM LINE R1 -1106 4250 3535 9 699 6092 1 3 3 chrUextra 14967077 14967790 -14036866 + LSU-rRNA_Dme rRNA rRNA 864 1576 -2324 9 699 3131 174 11 10 chrUextra 14967896 14968608 -14036048 + SAR_DM Satellite Satellite 282 994 -478 9 699 5925 22 1 4 chrUextra 14968709 14969425 -14035231 - BATUMI_I LTR Pao -2141 5822 5109 9 699 5750 29 1 0 chrUextra 14969525 14970241 -14034415 - NINJA_I LTR Pao -1780 4231 3515 9 699 4454 124 0 0 chrUextra 14970341 14971051 -14033605 + HETA LINE telomeric 2538 3247 -2834 9 699 6186 0 0 0 chrUextra 14971157 14971873 -14032783 - R2_DM LINE R2 -2477 1130 415 9 699 468 0 0 0 chrUextra 14971988 14972040 -14032616 + (TA)n Simple_repeat Simple_repeat 2 53 0 9 699 1627 85 68 0 chrUextra 14972063 14972311 -14032345 + Gypsy9_LTR LTR Gypsy 1 265 -71 9 699 1647 89 120 81 chrUextra 14972296 14972689 -14031967 + Gypsy9_I LTR Gypsy 12 419 -4258 9 699 627 48 0 0 chrUextra 14972789 14972872 -14031784 + (TTCTC)n Simple_repeat Simple_repeat 5 87 0 9 699 3394 195 3 7 chrUextra 14973619 14974320 -14030336 + ROVER-I_DM LTR Gypsy 2375 3072 -3512 9 699 1899 171 30 11 chrUextra 14974421 14975137 -14029519 + SAR_DM Satellite Satellite 1 729 -677 9 699 2139 23 0 0 chrUextra 14975237 14975503 -14029153 + FW_DM LINE Jockey 4427 4692 0 9 699 3437 51 2 2 chrUextra 14975503 14975953 -14028703 - R1_DM LINE R1 -3963 1393 944 9 699 5884 13 8 0 chrUextra 14976053 14976766 -14027890 - DOC2_DM LINE Jockey -1464 3329 2611 9 699 2294 198 77 32 chrUextra 14976905 14977585 -14027071 - TAHRE LINE telomeric -583 9880 9171 9 699 3178 11 8 0 chrUextra 14977685 14978059 -14026597 - MICROPIA_I LTR Gypsy -4099 377 1 9 699 2372 16 0 91 chrUextra 14978059 14978401 -14026255 - MICROPIA_LTR LTR Gypsy 0 476 166 9 699 3112 127 2 25 chrUextra 14978501 14979010 -14025646 + Gypsy12_I LTR Gypsy 3001 3497 -2049 9 699 953 122 17 11 chrUextra 14979324 14979498 -14025158 + Gypsy12A_LTR LTR Gypsy 2106 2280 0 9 699 3153 92 9 45 chrUextra 14979498 14980033 -14024623 + Gypsy12_I LTR Gypsy 1 516 -5030 9 699 730 11 11 0 chrUextra 14980133 14980225 -14024431 + Invader1_I LTR Gypsy 3094 3186 0 9 699 3603 12 2 0 chrUextra 14980225 14980647 -14024009 + Invader1_LTR LTR Gypsy 1 423 0 9 699 565 124 198 0 chrUextra 14980662 14980783 -14023873 - DNAREP1_DM LINE Penelope -196 398 254 9 699 5865 20 1 1 chrUextra 14980949 14981665 -14022991 + R1_DM LINE R1 3271 3986 -1370 9 699 6093 6 0 0 chrUextra 14981765 14982481 -14022175 - MDG1_I LTR Gypsy -1733 4863 4148 9 699 3008 174 31 8 chrUextra 14982587 14983296 -14021360 - SAR_DM Satellite Satellite -396 1076 352 9 699 1464 44 0 0 chrUextra 14983411 14983661 -14020995 + (CAATA)n Simple_repeat Simple_repeat 1 250 0 9 699 6123 4 0 0 chrUextra 14984216 14984929 -14019727 + G6_DM LINE Jockey 576 1288 -754 9 699 6216 0 0 0 chrUextra 14985029 14985745 -14018911 + BS2 LINE Jockey 2595 3310 -1411 9 699 473 250 0 0 chrUextra 14986394 14986534 -14018122 + DM176_I LTR Gypsy 1839 1978 -4442 9 699 1008 156 0 0 chrUextra 14986668 14986848 -14017808 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 699 816 186 0 0 chrUextra 14986854 14987031 -14017625 + (CATA)n Simple_repeat Simple_repeat 3 179 0 9 699 1125 128 0 0 chrUextra 14987036 14987216 -14017440 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 699 948 146 0 0 chrUextra 14987213 14987377 -14017279 + (CATA)n Simple_repeat Simple_repeat 2 165 0 9 699 5948 17 0 4 chrUextra 14988293 14989009 -14015647 - Gypsy4_I LTR Gypsy -5119 1169 457 9 699 3162 34 3 0 chrUextra 14989109 14989497 -14015159 - G5_DM LINE Jockey -495 4361 3973 9 699 2874 15 0 0 chrUextra 14989487 14989825 -14014831 - G5_DM LINE Jockey -1041 3815 3478 9 699 6097 1 4 3 chrUextra 14989925 14990641 -14014015 - LSU-rRNA_Dme rRNA rRNA -1319 2581 1865 9 699 3576 16 0 0 chrUextra 14990741 14991170 -14013486 - PROTOP_A DNA P -676 429 1 9 699 1586 164 0 0 chrUextra 14991170 14991449 -14013207 + ROVER-I_DM LTR Gypsy 2858 3136 -3448 9 699 5555 11 38 1 chrUextra 14991557 14992272 -14012384 - DM176_I LTR Gypsy -4698 1722 982 9 699 1819 0 0 0 chrUextra 14992373 14992579 -14012077 + ROO_LTR LTR Pao 223 428 0 9 699 309 91 0 0 chrUextra 14993189 14993233 -14011423 - Baggins1 LINE LOA -619 4834 4791 9 699 1641 28 0 62 chrUextra 14993678 14993905 -14010751 - Baggins1 LINE LOA 0 5453 5241 9 699 4074 34 0 2 chrUextra 14994005 14994511 -14010145 - R1_DM LINE R1 -3524 1832 1328 9 699 1644 42 5 5 chrUextra 14994508 14994721 -14009935 - R1_DM LINE R1 -4179 1177 965 9 699 2936 202 32 14 chrUextra 14994821 14995536 -14009120 + SAR_DM Satellite Satellite 1 727 -208 9 699 5304 1 4 68 chrUextra 14995637 14996353 -14008303 - LSU-rRNA_Dme rRNA rRNA -2060 1840 1171 9 699 5745 31 1 1 chrUextra 14996453 14997169 -14007487 + R1_DM LINE R1 4355 5070 -286 9 699 6208 0 3 1 chrUextra 14997269 14997985 -14006671 + SSU-rRNA_Dme rRNA rRNA 1185 1901 -94 9 699 706 0 0 0 chrUextra 14998085 14998165 -14006491 + LSU-rRNA_Dme rRNA rRNA 2558 2637 -1263 9 699 4675 6 0 6 chrUextra 14998151 14998698 -14005958 + R1_DM LINE R1 4813 5356 0 9 699 915 9 0 0 chrUextra 14998696 14998801 -14005855 + LSU-rRNA_Dme rRNA rRNA 2640 2744 -1156 9 699 1139 189 7 7 chrUextra 14999726 14999805 -14004851 - SAR_DM Satellite Satellite -749 723 456 9 699 1242 90 0 0 chrUextra 14999805 14999994 -14004662 + ARS406_DM Unknown Unknown 1 189 -164 9 699 1949 169 21 19 chrUextra 15000000 15000433 -14004223 - SAR_DM Satellite Satellite -663 809 376 9 699 23 68 0 0 chrUextra 15001115 15001159 -14003497 + AT_rich Low_complexity Low_complexity 1 44 0 9 699 6451 1 0 0 chrUextra 15001349 15002065 -14002591 + Invader2_I LTR Gypsy 657 1372 -3220 9 699 970 45 0 143 chrUextra 15002172 15002354 -14002302 - Invader3_LTR LTR Gypsy -142 156 1 9 699 3444 10 22 0 chrUextra 15002354 15002765 -14001891 - Invader3_I LTR Gypsy 0 4888 4469 9 699 1032 17 0 0 chrUextra 15002762 15002881 -14001775 - Invader3_I LTR Gypsy -230 4658 4540 9 699 393 261 114 96 chrUextra 15003288 15003568 -14001088 - Invader1_LTR LTR Gypsy -55 368 84 9 699 1406 65 16 0 chrUextra 15003797 15003981 -14000675 - Gypsy6A_LTR LTR Gypsy -27 393 207 9 699 3616 0 0 2 chrUextra 15004011 15004414 -14000242 - STALKER4_LTR LTR Gypsy 0 402 1 9 699 784 20 0 0 chrUextra 15004414 15004513 -14000143 - STALKER4_I LTR Gypsy 0 6530 6432 9 699 6163 22 0 7 chrUextra 15004613 15005329 -13999327 + BATUMI_I LTR Pao 5454 6164 -1799 9 699 6043 32 0 0 chrUextra 15005429 15006145 -13998511 + R1_DM LINE R1 2083 2798 -2558 9 699 1123 24 23 29 chrUextra 15006245 15006418 -13998238 + NTS_DM Other Other 69 240 0 9 699 1835 17 17 17 chrUextra 15006418 15006658 -13997998 + NTS_DM Other Other 1 240 0 9 699 1783 21 17 21 chrUextra 15006658 15006899 -13997757 + NTS_DM Other Other 1 240 0 9 699 555 16 0 0 chrUextra 15006899 15006961 -13997695 + NTS_DM Other Other 1 62 -178 9 699 2959 181 13 9 chrUextra 15007878 15008557 -13996099 - SAR_DM Satellite Satellite -593 879 198 9 699 744 104 8 8 chrUextra 15008467 15008593 -13996063 + ARS406_DM Unknown Unknown 1 126 -227 9 699 2415 173 33 27 chrUextra 15009509 15010108 -13994548 + SAR_DM Satellite Satellite 523 1125 -347 9 699 947 24 0 0 chrUextra 15010098 15010225 -13994431 - DOC2_DM LINE Jockey 0 4793 4667 9 699 6004 8 3 1 chrUextra 15010325 15011041 -13993615 + QUASIMODO_I LTR Gypsy 906 1622 -4438 9 699 1201 136 14 14 chrUextra 15011141 15011358 -13993298 + HETA LINE telomeric 5263 5479 -602 9 699 2194 196 8 16 chrUextra 15011356 15011848 -13992808 + HETA LINE telomeric 3455 3942 -2139 9 699 5326 2 3 0 chrUextra 15011957 15012545 -13992111 + LSU-rRNA_Dme rRNA rRNA 2037 2626 -1274 9 699 1199 0 0 0 chrUextra 15012542 15012673 -13991983 + R2_DM LINE R2 1921 2051 -1556 9 699 262 150 0 0 chrUextra 15012815 15012855 -13991801 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 250 175 0 0 chrUextra 15012907 15012947 -13991709 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 253 150 0 0 chrUextra 15012999 15013039 -13991617 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 262 150 0 0 chrUextra 15013186 15013226 -13991430 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 253 150 0 0 chrUextra 15013278 15013318 -13991338 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 262 150 0 0 chrUextra 15013370 15013410 -13991246 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 6181 3 3 0 chrUextra 15013589 15014305 -13990351 + STALKER4_I LTR Gypsy 3013 3730 -2800 9 699 6130 17 1 11 chrUextra 15015221 15015937 -13988719 + BATUMI_I LTR Pao 5642 6350 -1613 9 699 6120 15 0 0 chrUextra 15016037 15016753 -13987903 - ROO_I LTR Pao -2835 5421 4706 9 699 575 30 0 0 chrUextra 15016853 15016920 -13987736 - R1_DM LINE R1 -1264 4092 4026 9 699 5550 20 0 0 chrUextra 15016930 15017568 -13987088 - R1_DM LINE R1 -1690 3666 3029 9 699 1753 66 255 0 chrUextra 15017669 15017991 -13986665 - Copia2_I LTR Copia -3425 737 334 9 699 1328 25 0 0 chrUextra 15018005 15018163 -13986493 + PROTOP DNA P 155 312 -4168 9 699 29 0 0 0 chrUextra 15018177 15018206 -13986450 + AT_rich Low_complexity Low_complexity 1 29 0 9 699 1161 35 0 0 chrUextra 15018206 15018376 -13986280 + PROTOP DNA P 661 830 -3650 9 699 22 35 0 0 chrUextra 15018568 15018597 -13986059 + AT_rich Low_complexity Low_complexity 1 29 0 9 699 37 39 0 0 chrUextra 15018699 15018750 -13985906 + AT_rich Low_complexity Low_complexity 1 51 0 9 699 28 48 0 0 chrUextra 15019105 15019147 -13985509 + AT_rich Low_complexity Low_complexity 1 42 0 9 699 6366 11 0 0 chrUextra 15019301 15020017 -13984639 - R1_DM LINE R1 -66 5290 4575 9 699 21 0 0 0 chrUextra 15020642 15020663 -13983993 + AT_rich Low_complexity Low_complexity 1 21 0 9 699 5052 49 1 55 chrUextra 15020933 15021648 -13983008 - BATUMI_I LTR Pao -4732 3231 2555 9 699 5961 0 0 35 chrUextra 15021749 15022465 -13982191 - LSU-rRNA_Dme rRNA rRNA -3196 704 14 9 699 23 0 0 0 chrUextra 15023053 15023076 -13981580 + AT_rich Low_complexity Low_complexity 1 23 0 9 699 34 24 0 0 chrUextra 15023926 15023967 -13980689 + AT_rich Low_complexity Low_complexity 1 41 0 9 699 348 43 21 0 chrUextra 15024197 15024244 -13980412 + PROTOP DNA P 4431 4479 -1 9 699 26 30 0 0 chrUextra 15024621 15024654 -13980002 + AT_rich Low_complexity Low_complexity 1 33 0 9 699 21 57 0 0 chrUextra 15024700 15024735 -13979921 + AT_rich Low_complexity Low_complexity 1 35 0 9 699 21 89 0 0 chrUextra 15024773 15024829 -13979827 + AT_rich Low_complexity Low_complexity 1 56 0 9 699 1925 43 4 0 chrUextra 15025013 15025247 -13979409 + BATUMI_I LTR Pao 2317 2551 -5412 9 699 3688 39 41 16 chrUextra 15025236 15025729 -13978927 + BATUMI_I LTR Pao 2655 3159 -4804 9 699 2962 90 51 109 chrUextra 15025829 15026377 -13978279 + Invader1_I LTR Gypsy 2671 3186 0 9 699 912 109 25 43 chrUextra 15026378 15026541 -13978115 + Invader1_LTR LTR Gypsy 2 161 -262 9 699 3614 51 55 27 chrUextra 15026645 15027205 -13977451 + PROTOP_B DNA P 361 936 -217 9 699 293 50 0 0 chrUextra 15027198 15027258 -13977398 + PROTOP_B DNA P 572 631 -522 9 699 551 102 31 0 chrUextra 15027263 15027361 -13977295 + PROTOP_B DNA P 794 894 -259 9 699 3375 167 14 13 chrUextra 15028277 15028981 -13975675 + SAR_DM Satellite Satellite 372 1076 -396 9 699 293 0 0 0 chrUextra 15029093 15029127 -13975529 + R1_DM LINE R1 5323 5356 0 9 699 6181 1 0 6 chrUextra 15029125 15029809 -13974847 + LSU-rRNA_Dme rRNA rRNA 2640 3319 -581 9 699 4513 0 2 0 chrUextra 15029909 15030422 -13974234 + BARI_DM DNA Tc1 1214 1727 -1 9 699 1826 0 0 0 chrUextra 15030422 15030625 -13974031 + BARI_DM DNA Tc1 4 206 -1522 9 699 1838 69 4 0 chrUextra 15030725 15030971 -13973685 - BATUMI_I LTR Pao -139 7824 7578 9 699 3541 64 29 0 chrUextra 15030958 15031441 -13973215 + MDG1_I LTR Gypsy 5303 5799 -797 9 699 267 67 200 0 chrUextra 15031543 15031588 -13973068 - DNAREP1_DM LINE Penelope -45 549 496 9 699 4046 170 4 7 chrUextra 15032357 15033073 -13971583 - Gypsy5_I LTR Gypsy -2948 3561 2848 9 699 6183 22 0 0 chrUextra 15033173 15033889 -13970767 + FW_DM LINE Jockey 3780 4495 -197 9 699 6006 21 1 4 chrUextra 15033989 15034705 -13969951 + R1_DM LINE R1 3318 4031 -1325 9 699 344 265 114 96 chrUextra 15035815 15036095 -13968561 - Invader1_LTR LTR Gypsy -55 368 84 9 699 5489 44 4 10 chrUextra 15036437 15037153 -13967503 - IDEFIX_I LTR Gypsy -2091 3537 2826 9 699 6264 13 1 0 chrUextra 15037253 15037969 -13966687 - PROTOP DNA P -1259 3221 2505 9 699 6022 20 70 0 chrUextra 15038069 15038785 -13965871 - DM1731_I LTR Copia -2455 1521 756 9 699 2292 19 15 0 chrUextra 15039052 15039312 -13965344 + STALKER4_LTR LTR Gypsy 1 264 -138 9 699 2500 17 0 0 chrUextra 15039312 15039601 -13965055 - DM176_LTR LTR Gypsy 0 507 219 9 699 4367 4 0 0 chrUextra 15040517 15040995 -13963661 - SSU-rRNA_Dme rRNA rRNA -1517 478 1 9 699 32 0 0 0 chrUextra 15041127 15041159 -13963497 + AT_rich Low_complexity Low_complexity 1 32 0 9 699 5499 40 22 1 chrUextra 15041338 15042049 -13962607 + ZAM_I LTR Gypsy 2496 3221 -4269 9 699 5878 35 0 13 chrUextra 15042152 15042865 -13961791 - BATUMI_I LTR Pao -1647 6316 5613 9 699 25 0 0 0 chrUextra 15043014 15043039 -13961617 + AT_rich Low_complexity Low_complexity 1 25 0 9 699 3426 58 55 42 chrUextra 15043150 15043655 -13961001 + PROTOP_B DNA P 1 509 -644 9 699 260 107 0 51 chrUextra 15043949 15044008 -13960648 + Gypsy5_I LTR Gypsy 88 143 -6366 9 699 3505 18 0 0 chrUextra 15044008 15044401 -13960255 - Invader6_LTR LTR Gypsy 0 393 1 9 699 812 0 0 0 chrUextra 15044401 15044491 -13960165 - Invader6_I LTR Gypsy 0 4099 4010 9 699 1304 18 0 6 chrUextra 15044626 15044791 -13959865 - NTS_DM Other Other -39 201 38 9 699 907 9 0 27 chrUextra 15044791 15044903 -13959753 - NTS_DM Other Other -107 133 25 9 699 1304 18 0 6 chrUextra 15044956 15045121 -13959535 - NTS_DM Other Other -39 201 38 9 699 907 9 0 27 chrUextra 15045121 15045233 -13959423 - NTS_DM Other Other -107 133 25 9 699 243 0 0 0 chrUextra 15045285 15045313 -13959343 - NTS_DM Other Other -39 201 174 9 699 3943 22 7 0 chrUextra 15045414 15045874 -13958782 - R1_DM LINE R1 -61 5295 4833 9 699 2250 16 0 0 chrUextra 15045872 15046129 -13958527 - R1_DM LINE R1 -1697 3659 3403 9 699 34 24 0 0 chrUextra 15046269 15046310 -13958346 + AT_rich Low_complexity Low_complexity 1 41 0 9 699 6391 8 1 0 chrUextra 15047045 15047761 -13956895 - R1_DM LINE R1 -435 4921 4205 9 699 1426 38 135 67 chrUextra 15047861 15048245 -13956411 + PROTOP_B DNA P 489 936 -217 9 699 293 50 0 0 chrUextra 15048238 15048298 -13956358 + PROTOP_B DNA P 572 631 -522 9 699 2069 55 15 0 chrUextra 15048303 15048577 -13956079 + PROTOP_B DNA P 794 1071 -82 9 699 5207 42 0 0 chrUextra 15048677 15049295 -13955361 + R1_DM LINE R1 1211 1828 -3528 9 699 833 50 0 0 chrUextra 15049293 15049393 -13955263 + R1_DM LINE R1 1317 1416 -3940 9 699 2438 106 18 22 chrUextra 15049493 15049994 -13954662 - DOC2_DM LINE Jockey -4197 596 6 9 699 753 10 0 0 chrUextra 15050106 15050209 -13954447 - DOC2_DM LINE Jockey 0 4793 4691 9 699 6320 13 0 0 chrUextra 15050309 15051025 -13953631 - G_DM LINE Jockey -2505 1841 1126 9 699 2970 0 3 0 chrUextra 15051516 15051841 -13952815 - SSU-rRNA_Dme rRNA rRNA 0 1995 1670 9 699 3108 185 7 7 chrUextra 15051941 15052617 -13952039 - SAR_DM Satellite Satellite -602 870 195 9 699 877 98 0 0 chrUextra 15052524 15052657 -13951999 + ARS406_DM Unknown Unknown 1 133 -220 9 699 23 0 0 0 chrUextra 15052890 15052913 -13951743 + AT_rich Low_complexity Low_complexity 1 23 0 9 699 489 131 36 0 chrUextra 15053205 15053289 -13951367 - NTS_DM Other Other -150 90 4 9 699 472 14 0 40 chrUextra 15053399 15053473 -13951183 - NTS_DM Other Other -78 162 92 9 699 6441 1 1 0 chrUextra 15053573 15054289 -13950367 + DOC LINE Jockey 2793 3509 -1216 9 699 380 282 105 25 chrUextra 15054393 15054654 -13950002 + DM297_I LTR Gypsy 2809 2991 -3176 9 699 662 321 16 15 chrUextra 15054703 15055068 -13949588 + GTWIN_I LTR Gypsy 3119 3538 -2883 9 699 6207 20 0 0 chrUextra 15055209 15055921 -13948735 + FW_DM LINE Jockey 3632 4343 -349 9 699 32 0 0 0 chrUextra 15056306 15056338 -13948318 + AT_rich Low_complexity Low_complexity 1 32 0 9 699 2346 4 4 4 chrUextra 15056470 15056737 -13947919 + SSU-rRNA_Dme rRNA rRNA 1 267 -1728 9 699 6107 22 1 3 chrUextra 15057653 15058369 -13946287 + R1_DM LINE R1 1447 2161 -3195 9 699 3162 184 10 20 chrUextra 15058469 15059185 -13945471 + SAR_DM Satellite Satellite 402 1110 -362 9 699 387 0 0 0 chrUextra 15059958 15060001 -13944655 + (GAGAA)n Simple_repeat Simple_repeat 2 44 0 9 699 5553 30 8 14 chrUextra 15060103 15060817 -13943839 + Gypsy12_LTR LTR Gypsy 1144 1853 -483 9 699 555 122 0 0 chrUextra 15060917 15061007 -13943649 + DM297_I LTR Gypsy 5592 5681 -486 9 699 939 119 0 0 chrUextra 15061006 15061149 -13943507 + DM176_I LTR Gypsy 6278 6420 0 9 699 255 215 11 151 chrUextra 15061205 15061298 -13943358 + DM176_LTR LTR Gypsy 190 269 -238 9 699 273 191 59 0 chrUextra 15061407 15061475 -13943181 + DM176_LTR LTR Gypsy 295 366 -141 9 699 608 148 40 16 chrUextra 15061492 15061616 -13943040 + DMTOM1_LTR LTR Gypsy 284 410 0 9 699 5951 25 0 13 chrUextra 15061734 15062449 -13942207 + FW_DM LINE Jockey 909 1614 -3078 9 699 3355 172 10 7 chrUextra 15063383 15064079 -13940577 - SAR_DM Satellite Satellite -396 1076 379 9 699 482 0 0 0 chrUextra 15064181 15064234 -13940422 - SSU-rRNA_Dme rRNA rRNA -1942 53 1 9 699 32 0 0 0 chrUextra 15064366 15064398 -13940258 + AT_rich Low_complexity Low_complexity 1 32 0 9 699 28 48 0 0 chrUextra 15064726 15064768 -13939888 + AT_rich Low_complexity Low_complexity 1 42 0 9 699 6506 3 1 0 chrUextra 15065813 15066529 -13938127 + Gypsy6_I LTR Gypsy 3748 4464 -2548 9 699 6131 7 0 0 chrUextra 15066629 15067345 -13937311 - Invader2_I LTR Gypsy -129 4463 3748 9 699 1184 179 23 10 chrUextra 15067457 15067965 -13936691 - SAR_DM Satellite Satellite -680 514 1 9 699 727 197 32 11 chrUextra 15067976 15068161 -13936495 - SAR_DM Satellite Satellite -683 789 601 9 699 381 317 25 38 chrUextra 15068719 15068944 -13935712 + BLASTOPIA_I LTR Gypsy 3541 3925 -1061 9 699 3271 68 148 0 chrUextra 15069306 15069792 -13934864 - TART LINE telomeric -6595 7882 7325 9 699 3278 177 8 10 chrUextra 15069903 15070609 -13934047 + SAR_DM Satellite Satellite 326 1030 -442 9 699 794 81 16 16 chrUextra 15070709 15070835 -13933821 + PROTOP DNA P 3349 3474 -1006 9 699 843 103 145 6 chrUextra 15070873 15071039 -13933617 + PROTOP DNA P 3726 3914 -566 9 699 1081 137 145 3 chrUextra 15071047 15071425 -13933231 - DNAREP1_DM LINE Penelope -262 332 20 9 699 3810 261 21 36 chrUextra 15071529 15073023 -13931633 + SAR_DM Satellite Satellite 1 1472 -203 9 699 931 73 7 0 chrUextra 15072920 15073056 -13931600 - ARS406_DM Unknown Unknown -164 189 53 9 699 34 24 0 0 chrUextra 15073228 15073269 -13931387 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15073482 15073545 -13931111 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 2469 0 0 79 chrUextra 15073557 15073873 -13930783 + LSU-rRNA_Dme rRNA rRNA 1 291 -3609 9 700 21 89 0 0 chrUextra 15074017 15074073 -13930583 + AT_rich Low_complexity Low_complexity 1 56 0 9 700 5827 14 6 0 chrUextra 15075605 15076321 -13928335 - PROTOP DNA P -255 4225 3506 9 700 5904 36 1 3 chrUextra 15076421 15077137 -13927519 - R1_DM LINE R1 -3834 1522 808 9 700 870 9 9 27 chrUextra 15077240 15077351 -13927305 - NTS_DM Other Other -107 133 25 9 700 1304 18 0 6 chrUextra 15077403 15077568 -13927088 - NTS_DM Other Other -39 201 38 9 700 907 9 0 27 chrUextra 15077568 15077680 -13926976 - NTS_DM Other Other -107 133 25 9 700 22 56 0 0 chrUextra 15077706 15077742 -13926914 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 269 125 0 0 chrUextra 15077755 15077795 -13926861 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 700 262 150 0 0 chrUextra 15077838 15077878 -13926778 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 700 1272 19 0 6 chrUextra 15078053 15078215 -13926441 + NTS_DM Other Other 41 201 -39 9 700 907 9 0 27 chrUextra 15078267 15078379 -13926277 + NTS_DM Other Other 25 133 -107 9 700 1304 18 0 6 chrUextra 15078379 15078544 -13926112 + NTS_DM Other Other 38 201 -39 9 700 21 57 0 0 chrUextra 15078544 15078579 -13926077 + AT_rich Low_complexity Low_complexity 1 35 0 9 700 848 19 9 27 chrUextra 15078605 15078716 -13925940 + NTS_DM Other Other 25 133 -107 9 700 460 19 0 0 chrUextra 15078716 15078769 -13925887 + NTS_DM Other Other 38 90 -150 9 700 6122 25 3 1 chrUextra 15078869 15079585 -13925071 - Gypsy6_I LTR Gypsy -5496 1516 800 9 700 2767 0 0 0 chrUextra 15079685 15079989 -13924667 - BARI_DM DNA Tc1 -1421 307 4 9 700 3633 0 0 0 chrUextra 15079989 15080401 -13924255 - BARI_DM DNA Tc1 -1 1727 1316 9 700 6106 34 0 0 chrUextra 15080501 15081217 -13923439 + MAX_I LTR Pao 4269 4984 -2930 9 700 657 229 6 31 chrUextra 15081467 15081629 -13923027 - HETRP_DM Satellite Satellite -197 1675 1518 9 700 687 193 14 14 chrUextra 15081741 15081888 -13922768 - HETRP_DM Satellite Satellite -197 1675 1529 9 700 429 69 0 0 chrUextra 15082133 15082191 -13922465 - NTS_DM Other Other -179 61 4 9 700 1355 6 0 18 chrUextra 15082302 15082467 -13922189 - NTS_DM Other Other -78 162 1 9 700 1878 8 17 17 chrUextra 15082467 15082707 -13921949 - NTS_DM Other Other 0 240 1 9 700 1005 0 28 21 chrUextra 15082707 15082849 -13921807 - NTS_DM Other Other 0 240 98 9 700 6419 1 1 4 chrUextra 15082950 15083665 -13920991 + SSU-rRNA_Dme rRNA rRNA 112 824 -1171 9 700 293 172 16 0 chrUextra 15083767 15083831 -13920825 + XDMR Unknown Unknown 297 361 0 9 700 3118 186 6 19 chrUextra 15083776 15084479 -13920177 - SAR_DM Satellite Satellite -354 1118 425 9 700 2030 275 29 40 chrUextra 15084581 15085297 -13919359 + MAX_I LTR Pao 6473 7180 -734 9 700 3203 0 0 0 chrUextra 15085397 15085744 -13918912 - ROO_LTR LTR Pao -81 347 1 9 700 3295 0 0 0 chrUextra 15085744 15086113 -13918543 + ROO_I LTR Pao 6210 6578 -1678 9 700 6189 7 8 0 chrUextra 15086213 15086929 -13917727 + QUASIMODO_I LTR Gypsy 2818 3539 -2521 9 700 2672 204 44 8 chrUextra 15087031 15087738 -13916918 - SAR_DM Satellite Satellite -523 949 218 9 700 2733 187 36 42 chrUextra 15087845 15088561 -13916095 - SAR_DM Satellite Satellite -561 911 200 9 700 1184 0 0 0 chrUextra 15089477 15089607 -13915049 - SSU-rRNA_Dme rRNA rRNA -1865 130 1 9 700 32 0 0 0 chrUextra 15089739 15089771 -13914885 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 28 48 0 0 chrUextra 15090099 15090141 -13914515 + AT_rich Low_complexity Low_complexity 1 42 0 9 700 2935 13 0 5 chrUextra 15091109 15091492 -13913164 + STALKER4_I LTR Gypsy 6150 6530 0 9 700 2883 9 15 0 chrUextra 15091492 15091824 -13912832 + STALKER4_LTR LTR Gypsy 1 337 -65 9 700 32 0 0 0 chrUextra 15091939 15091971 -13912685 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 4896 4 0 0 chrUextra 15092103 15092639 -13912017 + SSU-rRNA_Dme rRNA rRNA 1 536 -1459 9 700 2772 0 6 6 chrUextra 15092739 15093060 -13911596 + LSU-rRNA_Dme rRNA rRNA 1468 1788 -2112 9 700 3161 3 0 3 chrUextra 15093104 15093454 -13911202 + LSU-rRNA_Dme rRNA rRNA 1788 2136 -1764 9 700 34 24 0 0 chrUextra 15093842 15093883 -13910773 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15094096 15094159 -13910497 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 890 0 0 0 chrUextra 15094171 15094269 -13910387 + LSU-rRNA_Dme rRNA rRNA 1 98 -3802 9 700 3168 191 13 21 chrUextra 15095187 15095899 -13908757 + SAR_DM Satellite Satellite 1 706 -216 9 700 4329 13 7 9 chrUextra 15096002 15096612 -13908044 - ROO_I LTR Pao -7746 510 1 9 700 895 0 0 0 chrUextra 15096612 15096714 -13907942 - ROO_LTR LTR Pao 0 428 327 9 700 22 56 0 0 chrUextra 15096892 15096928 -13907728 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 294 211 266 0 chrUextra 15097082 15097210 -13907446 + HETA LINE telomeric 4128 4203 -1878 9 700 608 286 49 28 chrUextra 15097241 15097529 -13907127 + G_DM LINE Jockey 421 714 -3632 9 700 1256 14 0 0 chrUextra 15097631 15097778 -13906878 - NTS_DM Other Other -93 147 1 9 700 1472 20 20 20 chrUextra 15097778 15097981 -13906675 - NTS_DM Other Other 0 240 38 9 700 826 10 0 0 chrUextra 15097981 15098077 -13906579 - NTS_DM Other Other -107 133 38 9 700 870 9 9 27 chrUextra 15098077 15098188 -13906468 - NTS_DM Other Other -107 133 25 9 700 21 57 0 0 chrUextra 15098214 15098249 -13906407 + AT_rich Low_complexity Low_complexity 1 35 0 9 700 595 32 21 11 chrUextra 15098249 15098344 -13906312 - NTS_DM Other Other -39 201 106 9 700 3297 178 8 10 chrUextra 15098445 15099158 -13905498 - SAR_DM Satellite Satellite -549 923 212 9 700 6274 0 0 0 chrUextra 15099259 15099974 -13904682 - ROO_I LTR Pao -1282 6974 6260 9 700 6133 31 0 0 chrUextra 15100889 15101604 -13903052 + R1_DM LINE R1 4099 4813 -543 9 700 1575 0 11 5 chrUextra 15102520 15102706 -13901950 + LSU-rRNA_Dme rRNA rRNA 1602 1788 -2112 9 700 4388 4 0 0 chrUextra 15102750 15103234 -13901422 + LSU-rRNA_Dme rRNA rRNA 1788 2271 -1629 9 700 6283 3 0 0 chrUextra 15103334 15104049 -13900607 - QUASIMODO_I LTR Gypsy -2429 3631 2917 9 700 34 24 0 0 chrUextra 15104376 15104417 -13900239 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15104630 15104693 -13899963 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 1440 0 0 0 chrUextra 15104705 15104864 -13899792 + LSU-rRNA_Dme rRNA rRNA 1 159 -3741 9 700 21 89 0 0 chrUextra 15105440 15105496 -13899160 + AT_rich Low_complexity Low_complexity 1 56 0 9 700 29 47 0 0 chrUextra 15105534 15105577 -13899079 + AT_rich Low_complexity Low_complexity 1 43 0 9 700 22 80 0 0 chrUextra 15105623 15105673 -13898983 + AT_rich Low_complexity Low_complexity 1 50 0 9 700 28 48 0 0 chrUextra 15105935 15105977 -13898679 + AT_rich Low_complexity Low_complexity 1 42 0 9 700 514 119 36 0 chrUextra 15106251 15106335 -13898321 - NTS_DM Other Other -150 90 4 9 700 278 22 0 61 chrUextra 15106445 15106494 -13898162 - NTS_DM Other Other -78 162 117 9 700 6502 0 4 0 chrUextra 15106594 15107309 -13897347 - LSU-rRNA_Dme rRNA rRNA -24 3876 3159 9 700 27 125 0 0 chrUextra 15107895 15108111 -13896545 + AT_rich Low_complexity Low_complexity 1 216 0 9 700 6295 1 1 7 chrUextra 15109854 15110569 -13894087 + LSU-rRNA_Dme rRNA rRNA 742 1452 -2448 9 700 1916 116 96 37 chrUextra 15110670 15111209 -13893447 - TART LINE telomeric -6922 7555 6985 9 700 461 45 88 15 chrUextra 15111209 15111277 -13893379 - TAHRE LINE telomeric -11 10452 10380 9 700 697 92 73 0 chrUextra 15111275 15111384 -13893272 - TART LINE telomeric -3814 10663 10547 9 700 6261 6 0 0 chrUextra 15111484 15112199 -13892457 - ROO_I LTR Pao -2799 5457 4743 9 700 1582 222 39 84 chrUextra 15112300 15113000 -13891656 - HETA LINE telomeric -1888 4193 3526 9 700 3475 2 0 0 chrUextra 15113116 15113517 -13891139 + LSU-rRNA_Dme rRNA rRNA 2179 2579 -1321 9 700 2562 3 0 3 chrUextra 15113532 15113829 -13890827 + R2_DM LINE R2 2 297 -3310 9 700 2744 23 23 0 chrUextra 15113929 15114271 -13890385 - FW_DM LINE Jockey -1938 2754 2405 9 700 3249 3 0 0 chrUextra 15114270 15114644 -13890012 + LSU-rRNA_Dme rRNA rRNA 2833 3206 -694 9 700 1086 266 48 44 chrUextra 15114748 15115413 -13889243 + SAR_DM Satellite Satellite 235 902 -570 9 700 351 275 43 24 chrUextra 15115204 15115457 -13889199 - XDMR_DM Unknown Unknown -9 351 94 9 700 5871 31 0 0 chrUextra 15115559 15116274 -13888382 - STALKER4_I LTR Gypsy -2125 4405 3691 9 700 6159 10 0 0 chrUextra 15116374 15117089 -13887567 - Copia2_I LTR Copia -221 3941 3227 9 700 673 123 16 110 chrUextra 15117189 15117371 -13887285 - DM297_LTR LTR Gypsy -179 235 71 9 700 3238 91 4 10 chrUextra 15117381 15117904 -13886752 - DM297_I LTR Gypsy -2 6165 5646 9 700 3119 64 66 0 chrUextra 15118004 15118719 -13885937 + PROTOP DNA P 252 881 -224 9 700 5830 21 1 3 chrUextra 15118819 15119534 -13885122 - R1_DM LINE R1 -1460 3896 3183 9 700 3010 179 6 19 chrUextra 15119634 15120334 -13884322 + SAR_DM Satellite Satellite 429 1119 -353 9 700 3846 0 0 0 chrUextra 15120449 15120891 -13883765 + Copia_I LTR Copia 4152 4593 0 9 700 2163 4 7 4 chrUextra 15120891 15121164 -13883492 + Copia_LTR LTR Copia 1 274 -2 9 700 2193 86 11 33 chrUextra 15121264 15121979 -13882677 - DMSAT6 Satellite Satellite -80 699 1 9 700 6104 10 0 0 chrUextra 15122079 15122794 -13881862 + Invader6_I LTR Gypsy 774 1488 -2611 9 700 4997 3 2 0 chrUextra 15122894 15123508 -13881148 + DM297_I LTR Gypsy 753 1367 -4800 9 700 923 0 0 0 chrUextra 15123495 15123609 -13881047 + DM297_I LTR Gypsy 5339 5452 -715 9 700 2763 175 31 20 chrUextra 15123742 15124424 -13880232 + SAR_DM Satellite Satellite 191 879 -593 9 700 5966 18 1 0 chrUextra 15124524 15125239 -13879417 + R1_DM LINE R1 3915 4630 -726 9 700 497 126 0 11 chrUextra 15125417 15125505 -13879151 - G3_DM LINE Jockey -4416 189 103 9 700 332 252 40 24 chrUextra 15126154 15126280 -13878376 - XDMR Unknown Unknown -233 128 1 9 700 3220 176 7 6 chrUextra 15126170 15126869 -13877787 + SAR_DM Satellite Satellite 246 945 -527 9 700 905 83 7 19 chrUextra 15126989 15127568 -13877088 - RSP Satellite Satellite 0 572 1 9 700 1004 0 9 0 chrUextra 15127568 15127684 -13876972 + (GAGAA)n Simple_repeat Simple_repeat 2 118 0 9 700 3785 3 68 1 chrUextra 15127784 15128487 -13876169 + Invader2_I LTR Gypsy 2457 3206 -1386 9 700 295 0 0 0 chrUextra 15128599 15128634 -13876022 + QUASIMODO_I LTR Gypsy 6026 6060 0 9 700 5648 3 0 0 chrUextra 15128634 15129292 -13875364 + QUASIMODO_LTR LTR Gypsy 1 658 0 9 700 198 0 0 0 chrUextra 15129292 15129314 -13875342 + (TA)n Simple_repeat Simple_repeat 1 22 0 9 700 943 26 0 0 chrUextra 15129414 15129531 -13875125 + DIVER2_I LTR Pao 4031 4147 0 9 700 3042 39 3 8 chrUextra 15129531 15129918 -13874738 + DIVER2_LTR LTR Pao 1 385 0 9 700 2559 199 31 15 chrUextra 15130229 15130944 -13873712 - SAR_DM Satellite Satellite -641 726 1 9 700 695 0 0 0 chrUextra 15131044 15131123 -13873533 + LSU-rRNA_Dme rRNA rRNA 3822 3900 0 9 700 22 56 0 0 chrUextra 15131195 15131231 -13873425 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 246 150 0 0 chrUextra 15131236 15131276 -13873380 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 246 150 0 0 chrUextra 15131328 15131368 -13873288 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 246 150 0 0 chrUextra 15131420 15131460 -13873196 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 255 125 0 0 chrUextra 15131503 15131543 -13873113 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 22 56 0 0 chrUextra 15131556 15131592 -13873064 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 808 19 9 27 chrUextra 15131618 15131729 -13872927 + NTS_DM Other Other 25 133 -107 9 700 258 0 0 0 chrUextra 15131729 15131759 -13872897 + NTS_DM Other Other 38 67 -173 9 700 3182 71 103 4 chrUextra 15131859 15132325 -13872331 + Gypsy12_I LTR Gypsy 5035 5546 0 9 700 1106 156 9 28 chrUextra 15132324 15132541 -13872115 + Gypsy12_LTR LTR Gypsy 1 213 -2123 9 700 3173 170 11 13 chrUextra 15133489 15134204 -13870452 + SAR_DM Satellite Satellite 293 1006 -466 9 700 5979 14 0 1 chrUextra 15134304 15135019 -13869637 - DMRT1B LINE R1 -557 4626 3913 9 700 987 17 0 0 chrUextra 15135119 15135236 -13869420 + (CAATA)n Simple_repeat Simple_repeat 5 121 0 9 700 2851 188 14 20 chrUextra 15135934 15136649 -13868007 - SAR_DM Satellite Satellite -316 1156 446 9 700 34 24 0 0 chrUextra 15137732 15137773 -13866883 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15137986 15138049 -13866607 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 1851 0 0 5 chrUextra 15138061 15138279 -13866377 + LSU-rRNA_Dme rRNA rRNA 1 217 -3683 9 700 2508 206 53 4 chrUextra 15138393 15139094 -13865562 - SAR_DM Satellite Satellite -396 1076 342 9 700 3072 175 7 20 chrUextra 15139194 15139909 -13864747 + SAR_DM Satellite Satellite 410 1115 -357 9 700 5910 4 1 0 chrUextra 15140009 15140724 -13863932 + MDG1_I LTR Gypsy 4459 5174 -1422 9 700 310 0 0 0 chrUextra 15141642 15141679 -13862977 + QUASIMODO_LTR LTR Gypsy 622 658 0 9 700 5575 1 7 21 chrUextra 15141679 15142353 -13862303 + QUASIMODO_I LTR Gypsy 1 665 -5395 9 700 6236 6 0 0 chrUextra 15142454 15143169 -13861487 - Invader1_I LTR Gypsy -1008 2178 1464 9 700 5950 1 0 0 chrUextra 15143269 15143951 -13860705 - LSU-rRNA_Dme rRNA rRNA -1431 2469 1788 9 700 5757 21 7 1 chrUextra 15144085 15144799 -13859857 - R1_DM LINE R1 -1424 3932 3215 9 700 5335 25 7 1 chrUextra 15144903 15145614 -13859042 - IDEFIX_I LTR Gypsy -127 5501 4787 9 700 6169 3 0 0 chrUextra 15145714 15146429 -13858227 + STALKER4_I LTR Gypsy 3535 4249 -2281 9 700 2202 0 4 0 chrUextra 15146529 15146784 -13857872 + LSU-rRNA_Dme rRNA rRNA 2326 2581 -1319 9 700 4017 2 0 2 chrUextra 15146782 15147244 -13857412 + R2_DM LINE R2 3 463 -3144 9 700 5771 24 1 0 chrUextra 15147344 15148059 -13856597 + FW_DM LINE Jockey 2833 3548 -1144 9 700 1101 0 8 0 chrUextra 15148974 15149107 -13855549 + ROO_I LTR Pao 8123 8256 0 9 700 3766 0 0 0 chrUextra 15149107 15149535 -13855121 + ROO_LTR LTR Pao 1 428 0 9 700 451 17 0 91 chrUextra 15149535 15149597 -13855059 - CIRCE LINE Composite -4413 1943 1888 9 700 282 287 30 30 chrUextra 15149597 15149664 -13854992 - Gypsy12_I LTR Gypsy -1579 3967 3835 9 700 6067 3 1 4 chrUextra 15149789 15150504 -13854152 + LSU-rRNA_Dme rRNA rRNA 723 1435 -2465 9 700 3116 170 11 10 chrUextra 15150604 15151304 -13853352 - SAR_DM Satellite Satellite -446 1026 326 9 700 6037 1 4 0 chrUextra 15151419 15152134 -13852522 + ROO_I LTR Pao 3685 4402 -3854 9 700 1587 15 5 28 chrUextra 15152234 15152446 -13852210 - BATUMI_I LTR Pao -5134 2829 2623 9 700 3885 11 2 2 chrUextra 15152491 15152949 -13851707 - BATUMI_I LTR Pao -5356 2607 2150 9 700 2967 182 8 17 chrUextra 15153049 15153763 -13850893 + SAR_DM Satellite Satellite 404 1111 -361 9 700 5737 16 7 4 chrUextra 15153864 15154579 -13850077 - R1_DM LINE R1 -1313 4043 3327 9 700 5192 31 4 50 chrUextra 15154679 15155394 -13849262 - TRANSIB2 DNA Transib -142 2702 2021 9 700 2074 166 33 11 chrUextra 15155727 15156208 -13848448 + TART LINE telomeric 8952 9389 -5088 9 700 4713 124 0 0 chrUextra 15156313 15157024 -13847632 - HMSBEAGLE_I LTR Gypsy -2403 4126 3416 9 700 5610 6 0 0 chrUextra 15157124 15157772 -13846884 + DMRT1A LINE R1 4536 5183 0 9 700 526 0 16 0 chrUextra 15157776 15157839 -13846817 + DOC2_DM LINE Jockey 1434 1497 -3296 9 700 5339 3 22 0 chrUextra 15157939 15158566 -13846090 + SSU-rRNA_Dme rRNA rRNA 1355 1995 0 9 700 5167 50 38 14 chrUextra 15158754 15159469 -13845187 - R1_DM LINE R1 -3760 1596 865 9 700 5288 17 45 0 chrUextra 15159569 15160284 -13844372 + STALKER4_I LTR Gypsy 5772 6518 -12 9 700 5688 17 8 13 chrUextra 15160384 15161099 -13843557 - MICROPIA_I LTR Gypsy -530 3946 3235 9 700 494 248 16 176 chrUextra 15161205 15161455 -13843201 - HMSBEAGLE_I LTR Gypsy -510 6019 5810 9 700 367 190 12 12 chrUextra 15161834 15161914 -13842742 - HMSBEAGLE_I LTR Gypsy -711 5818 5739 9 700 5943 20 0 0 chrUextra 15162014 15162729 -13841927 + DIVER_I LTR Pao 3835 4549 -1094 9 700 6055 3 0 3 chrUextra 15162829 15163544 -13841112 + DOC LINE Jockey 2896 3608 -1117 9 700 630 138 45 22 chrUextra 15163997 15164290 -13840366 + CT-rich Low_complexity Low_complexity 1 299 0 9 700 414 53 0 0 chrUextra 15164302 15164359 -13840297 + (GAGAA)n Simple_repeat Simple_repeat 5 61 0 9 700 452 51 0 0 chrUextra 15164459 15164518 -13840138 + DMCR1A LINE CR1 1814 1872 -2598 9 700 1916 94 45 0 chrUextra 15164529 15164817 -13839839 + DMCR1A LINE CR1 3220 3520 -950 9 700 2523 55 71 8 chrUextra 15164810 15165174 -13839482 + DMCR1A LINE CR1 3655 4041 -429 9 700 5805 31 0 0 chrUextra 15165274 15165989 -13838667 - R1_DM LINE R1 -2547 2809 2095 9 700 5651 0 1 0 chrUextra 15166089 15166804 -13837852 + DM176_I LTR Gypsy 5662 6377 -43 9 700 5992 6 1 3 chrUextra 15166904 15167619 -13837037 + R1_DM LINE R1 3537 4250 -1106 9 700 1746 9 0 40 chrUextra 15167719 15167943 -13836713 + ROVER-LTR_DM LTR Gypsy 153 367 0 9 700 3987 0 0 2 chrUextra 15167943 15168434 -13836222 + ROVER-I_DM LTR Gypsy 1 490 -6094 9 700 2765 202 22 12 chrUextra 15168538 15169248 -13835408 + SAR_DM Satellite Satellite 1 717 -208 9 700 2482 195 39 13 chrUextra 15169362 15170064 -13834592 - SAR_DM Satellite Satellite -290 1182 463 9 700 6134 1 0 1 chrUextra 15170164 15170879 -13833777 + R1_DM LINE R1 3064 3777 -1579 9 700 6059 3 0 1 chrUextra 15170979 15171694 -13832962 + LSU-rRNA_Dme rRNA rRNA 485 1198 -2702 9 700 2627 164 17 7 chrUextra 15171798 15172509 -13832147 - SAR_DM Satellite Satellite -980 718 1 9 700 5783 28 4 0 chrUextra 15172611 15173324 -13831332 + MAX_I LTR Pao 5110 5825 -2089 9 700 6210 1 0 0 chrUextra 15173424 15174139 -13830517 - G2_DM LINE Jockey -2291 811 97 9 700 2108 0 0 87 chrUextra 15174239 15174527 -13830129 - LSU-rRNA_Dme rRNA rRNA -3637 263 1 9 700 21 95 0 0 chrUextra 15174539 15174602 -13830054 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 34 24 0 0 chrUextra 15174815 15174856 -13829800 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 32 0 0 0 chrUextra 15175222 15175254 -13829402 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 3328 5 0 0 chrUextra 15175386 15175769 -13828887 + SSU-rRNA_Dme rRNA rRNA 1 383 -1612 9 700 5926 21 1 0 chrUextra 15175869 15176584 -13828072 - R1_DM LINE R1 -105 5251 4536 9 700 5852 16 1 6 chrUextra 15176684 15177399 -13827257 - CIRCE LINE Composite -1686 4670 3959 9 700 2851 183 58 27 chrUextra 15177499 15178214 -13826442 - SAR_DM Satellite Satellite -612 737 1 9 700 3307 166 9 6 chrUextra 15178331 15179029 -13825627 + SAR_DM Satellite Satellite 326 1025 -447 9 700 3673 0 0 0 chrUextra 15179135 15179556 -13825100 - SSU-rRNA_Dme rRNA rRNA -875 1120 700 9 700 2316 8 0 0 chrUextra 15179556 15179822 -13824834 + DMLTR5 LTR Gypsy 1 266 0 9 700 1370 149 34 4 chrUextra 15179971 15180233 -13824423 - Invader3_I LTR Gypsy -128 4760 4491 9 700 310 89 0 0 chrUextra 15180431 15180476 -13824180 - DMRT1B LINE R1 -14 5169 5125 9 700 847 35 271 7 chrUextra 15180479 15180623 -13824033 + PROTOP_B DNA P 1 182 -971 9 700 6136 1 17 1 chrUextra 15180759 15181474 -13823182 - LSU-rRNA_Dme rRNA rRNA -780 3120 2395 9 700 462 108 27 0 chrUextra 15181768 15181842 -13822814 - NTS_DM Other Other -161 79 4 9 700 1301 6 0 18 chrUextra 15181952 15182117 -13822539 - NTS_DM Other Other -78 162 1 9 700 1220 6 23 17 chrUextra 15182117 15182289 -13822367 - NTS_DM Other Other 0 240 68 9 700 4780 2 0 0 chrUextra 15182389 15182946 -13821710 - QUASIMODO_LTR LTR Gypsy -101 557 1 9 700 697 89 0 10 chrUextra 15182952 15183054 -13821602 - DNAREP1_DM LINE Penelope -493 101 1 9 700 6145 3 1 0 chrUextra 15183204 15183919 -13820737 - NOMAD_I LTR Gypsy -879 5693 4978 9 700 316 202 10 20 chrUextra 15184019 15184120 -13820536 + XDMR_DM Unknown Unknown 261 360 0 9 700 2942 185 4 19 chrUextra 15184034 15184734 -13819922 - SAR_DM Satellite Satellite -354 1118 429 9 700 3005 176 11 13 chrUextra 15184834 15185547 -13819109 - SAR_DM Satellite Satellite -515 957 246 9 700 6077 8 1 0 chrUextra 15185649 15186364 -13818292 - R1_DM LINE R1 -555 4801 4086 9 700 2598 17 83 0 chrUextra 15186464 15186812 -13817844 + ROO_I LTR Pao 4910 5286 -2970 9 700 2893 47 29 0 chrUextra 15186794 15187179 -13817477 + ROO_I LTR Pao 5432 5827 -2429 9 700 442 193 61 9 chrUextra 15187279 15187394 -13817262 - ARS406_DM Unknown Unknown -232 121 1 9 700 2710 181 23 17 chrUextra 15187303 15187994 -13816662 + SAR_DM Satellite Satellite 191 885 -587 9 700 692 35 0 0 chrUextra 15188094 15188181 -13816475 - R1_DM LINE R1 -3893 1463 1377 9 700 5040 31 0 0 chrUextra 15188189 15188809 -13815847 + FW_DM LINE Jockey 1 620 -4072 9 700 5795 17 4 4 chrUextra 15188909 15189624 -13815032 + R1_DM LINE R1 3686 4400 -956 9 700 668 104 0 0 chrUextra 15189724 15189830 -13814826 - ARS406_DM Unknown Unknown -247 106 1 9 700 3025 182 7 6 chrUextra 15189737 15190437 -13814219 + SAR_DM Satellite Satellite 195 895 -577 9 700 2662 172 53 31 chrUextra 15190539 15191254 -13813402 - SAR_DM Satellite Satellite -321 1151 421 9 700 5513 44 3 6 chrUextra 15191354 15192069 -13812587 + R1_DM LINE R1 1132 1844 -3512 9 700 1214 5 185 0 chrUextra 15192169 15192353 -13812303 + CIRCE LINE Composite 2918 3135 -3221 9 700 4247 11 4 0 chrUextra 15192351 15192884 -13811772 + STALKER4_I LTR Gypsy 1107 1641 -4889 9 700 3364 0 2 57 chrUextra 15192984 15193421 -13811235 - LSU-rRNA_Dme rRNA rRNA -3487 413 1 9 700 21 95 0 0 chrUextra 15193433 15193496 -13811160 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 268 182 0 0 chrUextra 15193807 15193862 -13810794 + XDMR Unknown Unknown 307 361 0 9 700 3020 177 9 21 chrUextra 15193815 15194514 -13810142 - SAR_DM Satellite Satellite -361 1111 422 9 700 4536 20 7 16 chrUextra 15194614 15195183 -13809473 - CIRCE LINE Composite -3905 2451 1888 9 700 579 296 42 57 chrUextra 15194848 15195250 -13809406 - Gypsy12_I LTR Gypsy -1316 4230 3835 9 700 547 43 0 0 chrUextra 15195259 15195329 -13809327 - CIRCE LINE Composite -4474 1882 1813 9 700 6014 1 1 1 chrUextra 15195429 15196144 -13808512 - ROO_I LTR Pao -2716 5540 4826 9 700 6063 0 1 1 chrUextra 15196244 15196959 -13807697 + R1_DM LINE R1 888 1602 -3754 9 700 25 0 0 0 chrUextra 15197115 15197140 -13807516 + AT_rich Low_complexity Low_complexity 1 25 0 9 700 5936 3 3 1 chrUextra 15197874 15198589 -13806067 - ROO_I LTR Pao -4797 3459 2744 9 700 4557 64 7 17 chrUextra 15198689 15199404 -13805252 + I_DM LINE I 911 1618 -4613 9 700 5834 8 0 1 chrUextra 15199504 15200219 -13804437 + IDEFIX_I LTR Gypsy 316 1029 -4599 9 700 6210 1 0 3 chrUextra 15200319 15201034 -13803622 - SSU-rRNA_Dme rRNA rRNA -1085 910 198 9 700 800 87 0 0 chrUextra 15201134 15201260 -13803396 - ARS406_DM Unknown Unknown -227 126 1 9 700 3015 181 9 7 chrUextra 15201154 15201849 -13802807 + SAR_DM Satellite Satellite 180 875 -597 9 700 285 282 107 89 chrUextra 15202120 15202400 -13802256 + Invader1_LTR LTR Gypsy 84 368 -55 9 700 6150 1 0 0 chrUextra 15202764 15203479 -13801177 + FW_DM LINE Jockey 1168 1882 -2810 9 700 32 0 0 0 chrUextra 15203598 15203630 -13801026 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 4638 2 0 2 chrUextra 15203762 15204294 -13800362 + SSU-rRNA_Dme rRNA rRNA 1 531 -1464 9 701 6042 1 0 0 chrUextra 15205209 15205924 -13798732 - ROO_I LTR Pao -4590 3666 2952 9 701 5978 6 1 3 chrUextra 15206024 15206739 -13797917 + R1_DM LINE R1 3377 4090 -1266 9 701 1108 43 0 0 chrUextra 15206839 15206978 -13797678 - DIVER2_I LTR Pao -3575 572 434 9 701 2264 82 48 3 chrUextra 15207222 15207554 -13797102 - DIVER2_I LTR Pao -3708 439 93 9 701 5672 4 0 35 chrUextra 15207654 15208369 -13796287 + LSU-rRNA_Dme rRNA rRNA 90 779 -3121 9 701 4724 52 32 3 chrUextra 15208523 15209184 -13795472 + PROTOP DNA P 1 680 -3800 9 701 2755 191 34 30 chrUextra 15209284 15209999 -13794657 + SAR_DM Satellite Satellite 1 717 -219 9 701 6150 1 0 1 chrUextra 15210099 15210814 -13793842 + ROO_I LTR Pao 5137 5850 -2406 9 701 2125 138 124 11 chrUextra 15211015 15211629 -13793027 - DOC4_DM LINE Jockey 0 2791 2344 9 701 5614 41 10 1 chrUextra 15211729 15212443 -13792213 + Baggins1 LINE LOA 1300 2019 -3434 9 701 5441 38 22 1 chrUextra 15212544 15213254 -13791402 - R1_DM LINE R1 -4003 1353 629 9 701 5988 1 1 0 chrUextra 15213359 15214074 -13790582 - ROO_I LTR Pao -1280 6976 6261 9 701 6242 0 1 1 chrUextra 15214174 15214889 -13789767 + LSU-rRNA_Dme rRNA rRNA 3010 3724 -176 9 701 5778 0 1 1 chrUextra 15215041 15215704 -13788952 - LSU-rRNA_Dme rRNA rRNA 0 3900 3238 9 701 261 103 14 29 chrUextra 15216276 15216346 -13788310 + (TAAAAA)n Simple_repeat Simple_repeat 4 72 0 9 701 1524 0 5 0 chrUextra 15216619 15216803 -13787853 + ALUII_DM Unknown Unknown 56 240 0 9 701 6257 4 0 0 chrUextra 15217434 15218149 -13786507 + Copia2_I LTR Copia 3031 3745 -417 9 701 2319 113 47 25 chrUextra 15218278 15218964 -13785692 + DMSAT6 Satellite Satellite 1 700 0 9 701 3229 70 64 1 chrUextra 15219106 15219778 -13784878 - PROTOP_A DNA P 0 1105 528 9 701 5857 4 49 0 chrUextra 15220692 15221406 -13783250 - STALKER4_I LTR Gypsy -4183 2347 1599 9 701 6131 3 0 3 chrUextra 15221506 15222220 -13782436 - LSU-rRNA_Dme rRNA rRNA -954 2946 2235 9 701 2786 187 24 31 chrUextra 15222321 15223034 -13781622 - SAR_DM Satellite Satellite -1042 707 1 9 701 5650 11 53 0 chrUextra 15223134 15223848 -13780808 - QUASIMODO_I LTR Gypsy -2566 3494 2743 9 701 3343 91 0 0 chrUextra 15223948 15224410 -13780246 + HMSBEAGLE_I LTR Gypsy 1358 1819 -4710 9 701 554 184 0 0 chrUextra 15224400 15224509 -13780147 + HMSBEAGLE_I LTR Gypsy 2346 2454 -4075 9 701 752 172 28 0 chrUextra 15224513 15224658 -13779998 + HMSBEAGLE_I LTR Gypsy 2422 2570 -3959 9 701 2812 191 47 13 chrUextra 15224762 15225476 -13779180 + SAR_DM Satellite Satellite 1 737 -208 9 701 6198 0 3 1 chrUextra 15225576 15226290 -13778366 - SSU-rRNA_Dme rRNA rRNA -70 1925 1211 9 701 5225 41 70 1 chrUextra 15226390 15227104 -13777552 - ROO_I LTR Pao -5387 2869 2107 9 701 2111 4 0 4 chrUextra 15227204 15227452 -13777204 - SSU-rRNA_Dme rRNA rRNA -1748 247 1 9 701 32 0 0 0 chrUextra 15227584 15227616 -13777040 + AT_rich Low_complexity Low_complexity 1 32 0 9 701 1768 24 0 0 chrUextra 15228018 15228231 -13776425 + QUASIMODO_LTR LTR Gypsy 395 607 -51 9 701 3418 63 28 4 chrUextra 15228238 15228732 -13775924 + QUASIMODO_I LTR Gypsy 30 535 -5525 9 701 2817 197 14 21 chrUextra 15228836 15229546 -13775110 - SAR_DM Satellite Satellite -620 705 1 9 701 6152 6 0 0 chrUextra 15229646 15230360 -13774296 + FW_DM LINE Jockey 3632 4345 -347 9 701 1817 153 39 26 chrUextra 15230460 15230843 -13773813 - STALKER4_I LTR Gypsy -5795 735 235 9 701 31 58 0 0 chrUextra 15230844 15230896 -13773760 + AT_rich Low_complexity Low_complexity 1 52 0 9 701 1057 101 4 33 chrUextra 15230984 15231174 -13773482 - STALKER4_LTR LTR Gypsy -3 399 227 9 701 801 27 0 111 chrUextra 15231274 15231400 -13773256 + Baggins1 LINE LOA 5342 5453 0 9 701 1030 63 7 0 chrUextra 15231845 15231988 -13772668 + Baggins1 LINE LOA 4791 4934 -519 9 701 2067 185 54 26 chrUextra 15232091 15232801 -13771855 + SAR_DM Satellite Satellite 1 729 -202 9 701 1102 14 0 7 chrUextra 15232903 15233046 -13771610 + Copia_LTR LTR Copia 135 276 0 9 701 1859 276 4 4 chrUextra 15233046 15233609 -13771047 - HMSBEAGLE_I LTR Gypsy -2703 3826 3264 9 701 5985 8 1 1 chrUextra 15233716 15234430 -13770226 - R1_DM LINE R1 -1422 3934 3221 9 701 6132 1 0 0 chrUextra 15234530 15235244 -13769412 - FW_DM LINE Jockey -3976 716 3 9 701 5923 8 0 0 chrUextra 15235344 15236058 -13768598 + STALKER4_I LTR Gypsy 2529 3242 -3288 9 701 1031 0 0 0 chrUextra 15236158 15236285 -13768371 + Copia_LTR LTR Copia 150 276 0 9 701 232 0 0 0 chrUextra 15236285 15236319 -13768337 + Copia_LTR LTR Copia 243 276 0 9 701 4783 0 2 0 chrUextra 15236319 15236872 -13767784 + Copia_I LTR Copia 1 554 -4039 9 701 1842 65 31 3 chrUextra 15237000 15237291 -13767365 - I_DM LINE I -5834 397 99 9 701 2263 86 35 3 chrUextra 15237346 15237686 -13766970 + Baggins1 LINE LOA 4205 4555 -898 9 701 5692 20 0 15 chrUextra 15237786 15238498 -13766158 - CIRCE LINE Composite -1662 4694 3994 9 701 3560 5 0 0 chrUextra 15238600 15239013 -13765643 + LSU-rRNA_Dme rRNA rRNA 2169 2581 -1319 9 701 2436 3 0 3 chrUextra 15239031 15239314 -13765342 + R2_DM LINE R2 1 282 -3325 9 701 828 92 0 0 chrUextra 15239414 15239544 -13765112 - ARS406_DM Unknown Unknown -223 130 1 9 701 2963 172 9 10 chrUextra 15239451 15240128 -13764528 + SAR_DM Satellite Satellite 195 870 -602 9 701 1394 18 0 0 chrUextra 15240228 15240393 -13764263 + R1_DM LINE R1 5192 5356 0 9 701 4758 4 2 0 chrUextra 15240391 15240941 -13763715 + LSU-rRNA_Dme rRNA rRNA 2640 3190 -710 9 701 2529 7 0 0 chrUextra 15241042 15241337 -13763319 + R1_DM LINE R1 4619 4913 -443 9 701 3693 0 0 0 chrUextra 15241335 15241756 -13762900 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2235 9 701 21 89 0 0 chrUextra 15242470 15242526 -13762130 + AT_rich Low_complexity Low_complexity 1 56 0 9 701 5634 20 1 6 chrUextra 15242670 15243384 -13761272 - CIRCE LINE Composite -1483 4873 4163 9 701 5811 20 10 1 chrUextra 15243484 15244198 -13760458 - IVK_DM LINE I -2745 2657 1938 9 701 601 0 0 0 chrUextra 15244298 15244369 -13760287 + R2_DM LINE R2 3528 3598 -9 9 701 5570 5 1 1 chrUextra 15244365 15245012 -13759644 + LSU-rRNA_Dme rRNA rRNA 2578 3224 -676 9 701 6073 3 0 1 chrUextra 15245112 15245826 -13758830 - FW_DM LINE Jockey -1517 3175 2463 9 701 2694 200 51 29 chrUextra 15246744 15247448 -13757208 + SAR_DM Satellite Satellite 1 719 -396 9 701 502 269 72 9 chrUextra 15247723 15247944 -13756712 - MICROPIA_I LTR Gypsy -886 3590 3356 9 701 503 297 21 13 chrUextra 15248026 15248265 -13756391 + Gypsy10_I LTR Gypsy 2223 2463 -2815 9 701 2366 7 0 4 chrUextra 15248368 15248645 -13756011 + R1_DM LINE R1 5081 5356 0 9 701 3803 2 0 0 chrUextra 15248643 15249082 -13755574 + LSU-rRNA_Dme rRNA rRNA 2640 3078 -822 9 701 3985 25 8 13 chrUextra 15249182 15249708 -13754948 - BATUMI_I LTR Pao -1014 6949 6427 9 701 1179 36 6 0 chrUextra 15249731 15249896 -13754760 + BATUMI_I LTR Pao 7303 7468 -495 9 701 2871 3 0 0 chrUextra 15249996 15250326 -13754330 - DMRT1B LINE R1 -4853 330 1 9 701 1512 0 0 0 chrUextra 15250542 15250710 -13753946 + (TTGTG)n Simple_repeat Simple_repeat 1 168 0 9 701 5787 32 0 0 chrUextra 15250810 15251524 -13753132 - R1_DM LINE R1 -2676 2680 1967 9 701 5578 30 3 0 chrUextra 15251624 15252319 -13752337 - R1_DM LINE R1 -2101 3255 2559 9 701 3096 164 17 16 chrUextra 15252438 15253134 -13751522 + SAR_DM Satellite Satellite 380 1076 -396 9 701 322 178 50 101 chrUextra 15253777 15253896 -13750760 - Copia_I LTR Copia -80 4513 4401 9 701 1431 0 0 0 chrUextra 15254066 15254225 -13750431 + (TATAA)n Simple_repeat Simple_repeat 5 163 0 9 701 2667 39 0 0 chrUextra 15254225 15254561 -13750095 + DM1731_LTR LTR Copia 1 336 0 9 701 1837 0 9 0 chrUextra 15254561 15254780 -13749876 + DM1731_I LTR Copia 1 221 -3755 9 701 6102 7 1 0 chrUextra 15254880 15255594 -13749062 - DOC LINE Jockey -993 3732 3018 9 701 5926 11 7 1 chrUextra 15255694 15256408 -13748248 - G_DM LINE Jockey -1158 3188 2471 9 701 5173 28 84 0 chrUextra 15256508 15257222 -13747434 - R1_DM LINE R1 -370 4986 4213 9 701 5493 3 0 0 chrUextra 15258136 15258765 -13745891 - Invader4_I LTR Gypsy -1784 629 1 9 701 748 0 0 0 chrUextra 15258765 15258850 -13745806 - Invader4_LTR LTR Gypsy 0 346 262 9 701 5382 29 3 1 chrUextra 15258950 15259664 -13744992 + IDEFIX_I LTR Gypsy 4580 5294 -334 9 701 2952 184 9 9 chrUextra 15259765 15260462 -13744194 - SAR_DM Satellite Satellite -577 895 199 9 701 622 105 9 0 chrUextra 15260373 15260478 -13744178 + ARS406_DM Unknown Unknown 1 106 -247 9 701 1012 16 0 0 chrUextra 15260578 15260703 -13743953 - Copia2_LTR_DM LTR Copia -73 125 1 9 701 3965 41 73 15 chrUextra 15260703 15261292 -13743364 - QUASIMODO_I LTR Gypsy -1032 5028 4406 9 701 3511 2 0 32 chrUextra 15261392 15261833 -13742823 - ROO_I LTR Pao -7829 427 1 9 701 2412 0 0 0 chrUextra 15261833 15262106 -13742550 - ROO_LTR LTR Pao 0 428 156 9 701 693 11 23 0 chrUextra 15262206 15262293 -13742363 + PROTOP_B DNA P 1067 1153 0 9 701 2507 88 81 118 chrUextra 15262293 15262920 -13741736 + PROTOP_B DNA P 420 1023 -130 9 701 3658 188 4 0 chrUextra 15263021 15263734 -13740922 + ROVER-I_DM LTR Gypsy 3965 4680 -1904 9 701 387 0 0 0 chrUextra 15264505 15264548 -13740108 + (GAGAA)n Simple_repeat Simple_repeat 4 46 0 9 701 364 125 16 74 chrUextra 15264650 15264771 -13739885 + BATUMI_I LTR Pao 656 769 -7194 9 701 2672 111 18 63 chrUextra 15264803 15265362 -13739294 + BATUMI_I LTR Pao 751 1284 -6679 9 701 4194 70 33 3 chrUextra 15265464 15266067 -13738589 - R1_DM LINE R1 -4735 621 1 9 701 628 26 0 0 chrUextra 15266100 15266176 -13738480 - R1_DM LINE R1 0 5356 5281 9 701 3102 167 13 10 chrUextra 15267090 15267786 -13736870 + SAR_DM Satellite Satellite 379 1076 -396 9 701 3163 176 8 7 chrUextra 15267904 15268614 -13736042 + SAR_DM Satellite Satellite 284 994 -478 9 701 6304 0 0 0 chrUextra 15268718 15269432 -13735224 + BEL_I LTR Pao 2537 3250 -2154 9 701 2334 0 0 7 chrUextra 15269969 15270246 -13734410 - QUASIMODO_LTR LTR Gypsy 0 658 384 9 701 2240 0 0 4 chrUextra 15270346 15270620 -13734036 + Copia_LTR LTR Copia 4 276 0 9 701 4893 62 32 8 chrUextra 15271160 15271874 -13732782 - MDG1_I LTR Gypsy -5586 1010 280 9 701 3101 24 0 0 chrUextra 15271974 15272354 -13732302 + Invader3_I LTR Gypsy 3284 3663 -1225 9 701 2850 0 0 15 chrUextra 15272354 15272688 -13731968 - HOBO DNA hAT 0 3016 2688 9 701 6187 6 1 0 chrUextra 15272788 15273502 -13731154 + Copia2_I LTR Copia 3248 3962 -200 9 701 2478 181 46 11 chrUextra 15273602 15274316 -13730340 - SAR_DM Satellite Satellite -264 1208 224 9 701 219 114 0 0 chrUextra 15274811 15274846 -13729810 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 701 733 235 51 40 chrUextra 15275237 15275512 -13729144 + Copia_I LTR Copia 4050 4327 -266 9 701 34 24 0 0 chrUextra 15275598 15275639 -13729017 + AT_rich Low_complexity Low_complexity 1 41 0 9 701 28 48 0 0 chrUextra 15277162 15277204 -13727452 + AT_rich Low_complexity Low_complexity 1 42 0 9 701 32 0 0 0 chrUextra 15277534 15277566 -13727090 + AT_rich Low_complexity Low_complexity 1 32 0 9 701 28 48 0 0 chrUextra 15278011 15278053 -13726603 + AT_rich Low_complexity Low_complexity 1 42 0 9 701 359 115 49 0 chrUextra 15278325 15278386 -13726270 - NTS_DM Other Other -150 90 27 9 701 434 0 0 0 chrUextra 15278486 15278536 -13726120 - ROO_I LTR Pao -8206 50 1 9 701 3766 0 0 0 chrUextra 15278536 15278964 -13725692 - ROO_LTR LTR Pao 0 428 1 9 701 1526 52 115 17 chrUextra 15278965 15279200 -13725456 + QUASIMODO_I LTR Gypsy 4563 4820 -1240 9 701 5944 4 4 1 chrUextra 15279300 15280014 -13724642 + ACCORD_I LTR Gypsy 60 775 -5513 9 701 382 109 18 82 chrUextra 15280145 15280255 -13724401 + BATUMI_I LTR Pao 667 769 -7194 9 701 2580 116 19 47 chrUextra 15280296 15280828 -13723828 + BATUMI_I LTR Pao 749 1265 -6698 9 701 6051 10 0 0 chrUextra 15280928 15281642 -13723014 - BLOOD_I LTR Gypsy -1735 4878 4165 9 701 6159 1 0 3 chrUextra 15281742 15282456 -13722200 - LSU-rRNA_Dme rRNA rRNA -1105 2795 2084 9 701 6162 1 1 0 chrUextra 15282556 15283270 -13721386 + DMRT1B LINE R1 4441 5155 -28 9 701 587 0 14 0 chrUextra 15283370 15283440 -13721216 - SSU-rRNA_Dme rRNA rRNA -1924 71 1 9 701 32 0 0 0 chrUextra 15283572 15283604 -13721052 + AT_rich Low_complexity Low_complexity 1 32 0 9 701 28 48 0 0 chrUextra 15283932 15283974 -13720682 + AT_rich Low_complexity Low_complexity 1 42 0 9 701 1398 159 4 7 chrUextra 15284184 15284463 -13720193 + SAR_DM Satellite Satellite 626 903 -569 9 701 1804 185 19 7 chrUextra 15284478 15284898 -13719758 + SAR_DM Satellite Satellite 496 920 -552 9 701 6054 8 0 0 chrUextra 15284998 15285712 -13718944 + Invader3_I LTR Gypsy 2204 2917 -1971 9 701 6014 1 1 3 chrUextra 15285812 15286526 -13718130 - R1_DM LINE R1 -3712 1644 932 9 701 1155 56 0 0 chrUextra 15286626 15286786 -13717870 + (TTATA)n Simple_repeat Simple_repeat 2 161 0 9 701 406 318 14 14 chrUextra 15287117 15287337 -13717319 + Copia2_I LTR Copia 140 359 -3803 9 701 4862 11 3 0 chrUextra 15287440 15288014 -13716642 - R1_DM LINE R1 -4780 576 1 9 701 1233 0 0 0 chrUextra 15288014 15288154 -13716502 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2493 9 701 2149 172 9 9 chrUextra 15288270 15288951 -13715705 + SAR_DM Satellite Satellite 1 681 -677 9 701 2327 98 4 40 chrUextra 15289085 15289782 -13714874 + DMSAT6 Satellite Satellite 1 672 0 9 701 2277 15 0 0 chrUextra 15289882 15290150 -13714506 - Invader6_I LTR Gypsy -3831 268 1 9 701 3351 18 0 0 chrUextra 15290150 15290543 -13714113 - Invader6_LTR LTR Gypsy 0 393 1 9 701 467 0 0 0 chrUextra 15290543 15290596 -13714060 - Invader6_I LTR Gypsy 0 4099 4047 9 701 254 0 0 0 chrUextra 15290696 15290726 -13713930 - DIVER_LTR LTR Pao -194 30 1 9 701 5694 26 0 0 chrUextra 15290726 15291410 -13713246 - DIVER_I LTR Pao 0 5643 4960 9 701 1513 185 7 0 chrUextra 15292330 15292638 -13712018 - Gypsy12A_LTR LTR Gypsy -1970 310 1 9 701 431 325 136 8 chrUextra 15292655 15292891 -13711765 + Ulysses_I LTR Gypsy 5202 5467 -914 9 701 1107 107 0 0 chrUextra 15293138 15293316 -13711340 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 9 701 6062 1 0 1 chrUextra 15293969 15294666 -13709990 - LSU-rRNA_Dme rRNA rRNA -1245 2655 1960 9 701 1492 28 27 18 chrUextra 15294766 15294986 -13709670 + NTS_DM Other Other 19 240 0 9 701 1756 17 17 17 chrUextra 15294986 15295226 -13709430 + NTS_DM Other Other 1 240 0 9 701 1850 4 17 13 chrUextra 15295226 15295465 -13709191 + NTS_DM Other Other 1 240 0 9 701 6220 1 1 0 chrUextra 15295580 15296294 -13708362 - DOC LINE Jockey -408 4317 3603 9 701 1058 93 7 0 chrUextra 15296394 15296545 -13708111 + DMCR1A LINE CR1 3369 3520 -950 9 701 4189 56 16 3 chrUextra 15296538 15297108 -13707548 + DMCR1A LINE CR1 3655 4231 -239 9 701 6185 0 1 0 chrUextra 15297208 15297922 -13706734 + DOC LINE Jockey 59 773 -3952 9 701 3770 91 5 18 chrUextra 15298082 15298679 -13705977 - DM297_I LTR Gypsy -3400 2767 2179 9 701 375 20 0 0 chrUextra 15298687 15298736 -13705920 - BS3_DM LINE Jockey -244 1546 1498 9 701 6128 1 3 3 chrUextra 15298836 15299550 -13705106 - SSU-rRNA_Dme rRNA rRNA -219 1776 1063 9 701 479 341 11 11 chrUextra 15299651 15300004 -13704652 - MICROPIA_I LTR Gypsy -3217 1259 907 9 701 5853 28 0 0 chrUextra 15300464 15301178 -13703478 + R1_DM LINE R1 2652 3365 -1991 9 701 2845 68 5 17 chrUextra 15301375 15301781 -13702875 - Baggins1 LINE LOA -262 5191 4791 9 701 1844 192 40 6 chrUextra 15302092 15302806 -13701850 + SAR_DM Satellite Satellite 1 738 -396 9 701 1117 219 247 26 chrUextra 15303041 15303547 -13701109 + TAHRE LINE telomeric 9659 10276 -187 9 701 34 24 0 0 chrUextra 15303556 15303597 -13701059 + AT_rich Low_complexity Low_complexity 1 41 0 9 701 3067 47 15 28 chrUextra 15303720 15304434 -13700222 + PROTOP_A DNA P 221 771 -334 9 701 5964 3 1 3 chrUextra 15304535 15305248 -13699408 - R1_DM LINE R1 -3744 1612 901 9 701 3020 183 10 10 chrUextra 15305348 15306050 -13698606 - SAR_DM Satellite Satellite -489 983 282 9 701 3604 20 2 0 chrUextra 15306162 15306602 -13698054 - FW_DM LINE Jockey -2502 2190 1750 9 701 1793 39 106 26 chrUextra 15306611 15306876 -13697780 + ROO_I LTR Pao 4193 4478 -3778 9 701 6155 3 0 0 chrUextra 15306976 15307690 -13696966 + DM1731_I LTR Copia 2032 2745 -1231 9 701 855 143 357 28 chrUextra 15308013 15308315 -13696341 - DNAREP1_DM LINE Penelope -2 592 193 9 701 322 200 90 0 chrUextra 15308352 15308452 -13696204 - DNAREP1_DM LINE Penelope -485 109 1 9 701 6024 0 4 0 chrUextra 15308604 15309318 -13695338 + ROO_I LTR Pao 2551 3267 -4989 9 701 6214 0 0 1 chrUextra 15309421 15310132 -13694524 + SSU-rRNA_Dme rRNA rRNA 347 1056 -939 9 701 3150 162 14 16 chrUextra 15310232 15310939 -13693717 + SAR_DM Satellite Satellite 253 958 -514 9 701 5764 14 4 0 chrUextra 15311046 15311760 -13692896 + ROO_I LTR Pao 3382 4098 -4158 9 701 5873 22 0 0 chrUextra 15311860 15312574 -13692082 + FW_DM LINE Jockey 3009 3722 -970 9 701 2864 191 16 22 chrUextra 15312677 15313388 -13691268 + SAR_DM Satellite Satellite 1 706 -208 9 701 3003 110 3 3 chrUextra 15313489 15314021 -13690635 - Invader6_I LTR Gypsy -572 3527 3163 9 701 1345 35 6 0 chrUextra 15314028 15314202 -13690454 - Invader6_I LTR Gypsy -1806 2293 2119 9 701 938 292 31 25 chrUextra 15314335 15314853 -13689803 + Copia2_I LTR Copia 1550 2116 -2477 9 701 28 0 0 0 chrUextra 15314914 15314942 -13689714 + AT_rich Low_complexity Low_complexity 1 28 0 9 701 5817 11 0 0 chrUextra 15315116 15315830 -13688826 + STALKER4_I LTR Gypsy 2989 3702 -2828 9 701 2983 160 34 17 chrUextra 15316749 15317450 -13687206 + SAR_DM Satellite Satellite 246 958 -514 9 701 5285 48 0 13 chrUextra 15317558 15318272 -13686384 - R1_DM LINE R1 -4343 1013 309 9 701 3854 15 0 0 chrUextra 15318372 15318834 -13685822 - PROTOP_A DNA P -643 462 1 9 701 47 0 0 0 chrUextra 15319327 15319374 -13685282 + AT_rich Low_complexity Low_complexity 1 47 0 9 701 680 24 0 0 chrUextra 15319818 15319900 -13684756 - STALKER4_LTR LTR Gypsy -190 212 131 9 701 6212 1 0 0 chrUextra 15320000 15320714 -13683942 + STALKER4_I LTR Gypsy 3687 4400 -2130 9 701 5165 52 14 8 chrUextra 15320814 15321528 -13683128 + R1_DM LINE R1 415 1132 -4224 9 701 5334 2 0 0 chrUextra 15321628 15322234 -13682422 - SSU-rRNA_Dme rRNA rRNA -1389 606 1 9 701 5565 18 0 1 chrUextra 15322442 15323156 -13681500 + QUASIMODO_I LTR Gypsy 3267 3979 -2081 9 701 3300 119 64 32 chrUextra 15323256 15323970 -13680686 + STALKER4_I LTR Gypsy 535 1271 -5259 9 701 3502 38 11 0 chrUextra 15324070 15324514 -13680142 - PROTOP DNA P -4031 449 1 9 701 2958 171 16 21 chrUextra 15324885 15325594 -13679062 + SAR_DM Satellite Satellite 191 895 -577 9 701 251 290 107 89 chrUextra 15325981 15326261 -13678395 - Invader1_LTR LTR Gypsy -55 368 84 9 701 4370 23 0 54 chrUextra 15327326 15327918 -13676738 - CIRCE LINE Composite -4492 1864 1305 9 701 496 327 25 25 chrUextra 15327761 15328040 -13676616 - Gypsy12_I LTR Gypsy -2177 3369 3091 9 701 29 0 0 0 chrUextra 15328316 15328345 -13676311 + AT_rich Low_complexity Low_complexity 1 29 0 9 701 5966 17 0 1 chrUextra 15328954 15329668 -13674988 - R1_DM LINE R1 -799 4557 3845 9 701 1591 171 3 6 chrUextra 15330587 15330923 -13673733 + SAR_DM Satellite Satellite 569 903 -569 9 701 1585 177 17 6 chrUextra 15330938 15331296 -13673360 + SAR_DM Satellite Satellite 496 857 -615 9 701 246 150 0 0 chrUextra 15331455 15331495 -13673161 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 701 22 56 0 0 chrUextra 15331500 15331536 -13673120 + AT_rich Low_complexity Low_complexity 1 36 0 9 701 4383 0 2 0 chrUextra 15331609 15332110 -13672546 - LSU-rRNA_Dme rRNA rRNA 0 3900 3399 9 701 21 89 0 0 chrUextra 15332477 15332533 -13672123 + AT_rich Low_complexity Low_complexity 1 56 0 9 701 3203 3 3 3 chrUextra 15332552 15332924 -13671732 - SSU-rRNA_Dme rRNA rRNA 0 1995 1624 9 701 3042 171 15 20 chrUextra 15333024 15333738 -13670918 + SAR_DM Satellite Satellite 256 966 -506 9 701 6114 0 3 4 chrUextra 15333838 15334552 -13670104 - SSU-rRNA_Dme rRNA rRNA -168 1827 1115 9 701 6237 3 0 0 chrUextra 15334652 15335366 -13669290 - Invader3_I LTR Gypsy -3297 1591 878 9 702 572 195 25 55 chrUextra 15335468 15335631 -13669025 - DMCR1A LINE CR1 -2187 2283 2126 9 702 6091 0 0 0 chrUextra 15336280 15336994 -13667662 + STALKER4_I LTR Gypsy 5078 5791 -739 9 702 335 296 19 19 chrUextra 15337509 15337671 -13666985 - MDG3_I LTR Gypsy -1562 3424 3263 9 702 2787 204 17 22 chrUextra 15337908 15338622 -13666034 + SAR_DM Satellite Satellite 1 710 -227 9 702 21 89 0 0 chrUextra 15338750 15338806 -13665850 + AT_rich Low_complexity Low_complexity 1 56 0 9 702 5329 2 2 0 chrUextra 15338825 15339436 -13665220 - SSU-rRNA_Dme rRNA rRNA 0 1995 1384 9 702 5375 31 78 0 chrUextra 15339536 15340250 -13664406 + R1_DM LINE R1 4385 5154 -202 9 702 1677 10 0 0 chrUextra 15340350 15340553 -13664103 - IDEFIX_LTR LTR Gypsy -391 203 1 9 702 2559 61 0 0 chrUextra 15340553 15340910 -13663746 - IDEFIX_I LTR Gypsy -1443 4185 3829 9 702 5581 12 1 4 chrUextra 15341189 15341878 -13662778 + LSU-rRNA_Dme rRNA rRNA 218 904 -2996 9 702 5649 1 0 36 chrUextra 15341978 15342692 -13661964 + LSU-rRNA_Dme rRNA rRNA 8 695 -3205 9 702 3789 5 0 0 chrUextra 15342792 15343227 -13661429 - R2_DM LINE R2 -916 2691 2257 9 702 2458 0 0 0 chrUextra 15343225 15343506 -13661150 - LSU-rRNA_Dme rRNA rRNA -1323 2577 2297 9 702 5727 4 59 0 chrUextra 15343606 15344320 -13660336 + FW_DM LINE Jockey 2574 3329 -1363 9 702 805 48 0 0 chrUextra 15344420 15344523 -13660133 + BATUMI_I LTR Pao 4141 4243 -3720 9 702 4888 45 0 8 chrUextra 15344510 15345134 -13659522 + BATUMI_I LTR Pao 4441 5059 -2904 9 702 34 24 0 0 chrUextra 15345794 15345835 -13658821 + AT_rich Low_complexity Low_complexity 1 41 0 9 702 3490 196 4 1 chrUextra 15346051 15346762 -13657894 + ROVER-I_DM LTR Gypsy 3914 4626 -1958 9 702 3023 152 5 5 chrUextra 15346870 15347576 -13657080 - BATUMI_I LTR Pao -3197 4717 3935 9 702 5870 32 0 0 chrUextra 15347676 15348390 -13656266 - CIRCE LINE Composite -197 6159 5446 9 702 6132 1 1 0 chrUextra 15348490 15349204 -13655452 + R1_DM LINE R1 1332 2046 -3310 9 702 4937 43 4 49 chrUextra 15349304 15350018 -13654638 - BATUMI_I LTR Pao -5247 2716 2035 9 702 3139 172 11 8 chrUextra 15350119 15350832 -13653824 - SAR_DM Satellite Satellite -416 1056 342 9 702 361 165 11 32 chrUextra 15350932 15351026 -13653630 + XDMR_DM Unknown Unknown 260 351 -9 9 702 2748 176 21 24 chrUextra 15350949 15351646 -13653010 - SAR_DM Satellite Satellite -353 1119 425 9 702 5983 10 0 0 chrUextra 15351746 15352460 -13652196 + STALKER4_I LTR Gypsy 2018 2731 -3799 9 702 902 118 6 12 chrUextra 15352560 15352723 -13651933 + SAR_DM Satellite Satellite 742 903 -569 9 702 2290 181 15 11 chrUextra 15352738 15353274 -13651382 + SAR_DM Satellite Satellite 496 1033 -439 9 702 6090 6 0 1 chrUextra 15353376 15354088 -13650568 - DMRT1B LINE R1 -39 5144 4434 9 702 288 0 0 0 chrUextra 15354188 15354227 -13650429 + NTS_DM Other Other 95 133 -107 9 702 1252 18 0 6 chrUextra 15354227 15354392 -13650264 + NTS_DM Other Other 38 201 -39 9 702 21 57 0 0 chrUextra 15354392 15354427 -13650229 + AT_rich Low_complexity Low_complexity 1 35 0 9 702 832 9 9 27 chrUextra 15354453 15354564 -13650092 + NTS_DM Other Other 25 133 -107 9 702 817 0 0 0 chrUextra 15354564 15354660 -13649996 + NTS_DM Other Other 38 133 -107 9 702 1387 25 20 20 chrUextra 15354660 15354863 -13649793 + NTS_DM Other Other 38 240 0 9 702 324 26 0 0 chrUextra 15354863 15354902 -13649754 + NTS_DM Other Other 1 39 -201 9 702 5070 27 126 1 chrUextra 15355816 15356530 -13648126 - IDEFIX_I LTR Gypsy -4417 1211 409 9 702 2458 98 1 41 chrUextra 15356631 15357344 -13647312 + DMSAT6 Satellite Satellite 1 684 -92 9 702 5918 10 0 1 chrUextra 15357444 15358158 -13646498 + STALKER4_I LTR Gypsy 2137 2849 -3681 9 702 5770 8 0 1 chrUextra 15358258 15358972 -13645684 + IDEFIX_I LTR Gypsy 4137 4849 -779 9 702 6056 10 0 1 chrUextra 15359072 15359786 -13644870 + STALKER4_I LTR Gypsy 4004 4716 -1814 9 702 5741 22 22 1 chrUextra 15359886 15360600 -13644056 + R1_DM LINE R1 3156 3884 -1472 9 702 1599 20 0 5 chrUextra 15360700 15360905 -13643751 - NTS_DM Other Other -36 204 1 9 702 1734 21 17 17 chrUextra 15360905 15361145 -13643511 - NTS_DM Other Other 0 240 1 9 702 1731 21 17 17 chrUextra 15361145 15361385 -13643271 - NTS_DM Other Other 0 240 1 9 702 6128 3 0 0 chrUextra 15361514 15362227 -13642429 + R1_DM LINE R1 2219 2931 -2425 9 702 1389 0 0 0 chrUextra 15362328 15362494 -13642162 - NTS_DM Other Other -74 166 1 9 702 1861 0 17 13 chrUextra 15362494 15362733 -13641923 - NTS_DM Other Other 0 240 1 9 702 1850 4 17 13 chrUextra 15362733 15362972 -13641684 - NTS_DM Other Other 0 240 1 9 702 383 0 0 0 chrUextra 15362992 15363040 -13641616 + Copia_LTR LTR Copia 1 48 -228 9 702 1006 183 42 3 chrUextra 15363140 15363847 -13640809 - SAR_DM Satellite Satellite -837 734 1 9 702 5256 53 3 8 chrUextra 15363953 15364662 -13639994 + BATUMI_I LTR Pao 3262 3966 -3997 9 702 6037 7 0 0 chrUextra 15364766 15365479 -13639177 + Gypsy4_I LTR Gypsy 5060 5772 -516 9 702 5745 21 3 1 chrUextra 15365579 15366292 -13638364 + R1_DM LINE R1 3403 4116 -1240 9 702 5927 7 18 0 chrUextra 15366392 15367105 -13637551 - STALKER4_I LTR Gypsy -608 5922 5197 9 702 210 37 0 0 chrUextra 15367301 15367328 -13637328 + (GA)n Simple_repeat Simple_repeat 2 28 0 9 702 491 208 8 16 chrUextra 15367328 15367450 -13637206 + HETRP_DM Satellite Satellite 1549 1669 -203 9 702 655 186 7 14 chrUextra 15367615 15367757 -13636899 + HETRP_DM Satellite Satellite 1529 1669 -203 9 702 204 67 0 0 chrUextra 15367888 15367918 -13636738 + (GA)n Simple_repeat Simple_repeat 2 31 0 9 702 2603 166 22 10 chrUextra 15368018 15368731 -13635925 + SAR_DM Satellite Satellite 326 1215 -257 9 702 6092 4 1 0 chrUextra 15368831 15369544 -13635112 + R1_DM LINE R1 2041 2754 -2602 9 702 4828 20 2 2 chrUextra 15369644 15370233 -13634423 - R1_DM LINE R1 -1293 4063 3475 9 702 1020 24 8 0 chrUextra 15370231 15370357 -13634299 - R1_DM LINE R1 -712 4644 4518 9 702 5915 3 1 0 chrUextra 15370457 15371170 -13633486 + QUASIMODO_I LTR Gypsy 3692 4405 -1655 9 702 5646 31 0 0 chrUextra 15371270 15371983 -13632673 + MDG1_I LTR Gypsy 3134 3846 -2750 9 702 5835 30 0 0 chrUextra 15372084 15372795 -13631861 + R1_DM LINE R1 2793 3503 -1853 9 702 246 150 0 0 chrUextra 15372902 15372942 -13631714 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 702 22 56 0 0 chrUextra 15372947 15372983 -13631673 + AT_rich Low_complexity Low_complexity 1 36 0 9 702 4832 2 2 0 chrUextra 15373055 15373609 -13631047 - LSU-rRNA_Dme rRNA rRNA 0 3900 3346 9 702 5978 6 0 0 chrUextra 15373709 15374422 -13630234 - ROO_I LTR Pao -3336 4920 4208 9 702 5246 46 3 11 chrUextra 15374529 15375235 -13629421 + BATUMI_I LTR Pao 3047 3746 -4217 9 702 5772 18 22 1 chrUextra 15375336 15376046 -13628610 + Gypsy4_I LTR Gypsy 408 1132 -5156 9 702 6297 0 0 0 chrUextra 15376148 15376861 -13627795 + R2_DM LINE R2 1421 2133 -1474 9 702 805 300 41 42 chrUextra 15376963 15377609 -13627047 + BLOOD_I LTR Gypsy 1919 2583 -4013 9 702 5069 10 0 3 chrUextra 15377774 15378388 -13626268 + TART LINE telomeric 13865 14476 -1 9 702 275 202 30 50 chrUextra 15378388 15378487 -13626169 + TART LINE telomeric 3623 3719 -10758 9 702 336 0 0 0 chrUextra 15378587 15378632 -13626024 + NTS_DM Other Other 89 133 -107 9 702 817 0 0 0 chrUextra 15378632 15378728 -13625928 + NTS_DM Other Other 38 133 -107 9 702 1378 20 20 25 chrUextra 15378728 15378932 -13625724 + NTS_DM Other Other 38 240 0 9 702 1734 21 17 17 chrUextra 15378932 15379172 -13625484 + NTS_DM Other Other 1 240 0 9 702 1066 16 0 0 chrUextra 15379172 15379300 -13625356 + NTS_DM Other Other 1 128 -112 9 702 5947 14 1 1 chrUextra 15379400 15380113 -13624543 - DM1731_I LTR Copia -3057 919 207 9 702 2120 0 8 4 chrUextra 15380213 15380472 -13624184 + LSU-rRNA_Dme rRNA rRNA 1529 1788 -2112 9 702 3571 0 2 0 chrUextra 15380516 15380925 -13623731 + LSU-rRNA_Dme rRNA rRNA 1788 2197 -1703 9 702 5881 24 0 0 chrUextra 15381026 15381739 -13622917 - R1_DM LINE R1 -1598 3758 3046 9 702 1744 164 49 81 chrUextra 15381866 15382548 -13622108 + HETA LINE telomeric 1 630 -5451 9 702 6169 7 0 0 chrUextra 15382652 15383365 -13621291 + R2_DM LINE R2 2615 3327 -280 9 702 2762 180 10 23 chrUextra 15384278 15384973 -13619683 + SAR_DM Satellite Satellite 433 1118 -354 9 702 368 185 11 21 chrUextra 15384897 15384991 -13619665 - XDMR_DM Unknown Unknown -10 350 258 9 702 6168 7 0 0 chrUextra 15385091 15385804 -13618852 + DM1731_I LTR Copia 987 1699 -2277 9 702 5986 13 0 10 chrUextra 15385904 15386617 -13618039 + Gypsy2_I LTR Gypsy 4746 5451 -684 9 702 1393 165 55 25 chrUextra 15386717 15387079 -13617577 - STALKER4_I LTR Gypsy -5790 740 235 9 702 31 58 0 0 chrUextra 15387080 15387132 -13617524 + AT_rich Low_complexity Low_complexity 1 52 0 9 702 1198 62 12 0 chrUextra 15387270 15387430 -13617226 - STALKER4_LTR LTR Gypsy -23 379 218 9 702 571 90 11 0 chrUextra 15387710 15387799 -13616857 + BS3_DM LINE Jockey 1700 1789 -1 9 702 23 0 0 0 chrUextra 15387799 15387822 -13616834 + AT_rich Low_complexity Low_complexity 1 23 0 9 702 24 32 0 0 chrUextra 15387901 15387932 -13616724 + AT_rich Low_complexity Low_complexity 1 31 0 9 702 6424 3 4 0 chrUextra 15388343 15389056 -13615600 + FW_DM LINE Jockey 1394 2109 -2583 9 702 459 0 137 0 chrUextra 15389156 15389287 -13615369 + (GA)n Simple_repeat Simple_repeat 2 150 0 9 702 28 48 0 0 chrUextra 15390031 15390073 -13614583 + AT_rich Low_complexity Low_complexity 1 42 0 9 702 532 119 36 0 chrUextra 15390347 15390431 -13614225 - NTS_DM Other Other -150 90 4 9 702 1067 14 14 21 chrUextra 15390541 15390682 -13613974 - NTS_DM Other Other -78 162 23 9 702 6240 28 0 1 chrUextra 15390782 15391492 -13613164 + DIVER_I LTR Pao 1611 2319 -3324 9 702 3147 193 10 10 chrUextra 15391596 15392308 -13612348 + SAR_DM Satellite Satellite 272 983 -489 9 702 3001 183 22 22 chrUextra 15392408 15393121 -13611535 - SAR_DM Satellite Satellite -1033 713 1 9 702 3064 193 19 24 chrUextra 15393221 15393934 -13610722 + SAR_DM Satellite Satellite 1 709 -216 9 702 6621 1 1 0 chrUextra 15394034 15394747 -13609909 + DOC LINE Jockey 3667 4380 -345 9 702 6355 3 1 1 chrUextra 15394847 15395560 -13609096 - LSU-rRNA_Dme rRNA rRNA -2934 966 254 9 702 893 73 8 0 chrUextra 15395660 15395783 -13608873 + HETA LINE telomeric 5957 6080 -1 9 702 3603 154 0 0 chrUextra 15395781 15396373 -13608283 + HETA LINE telomeric 2709 3300 -2781 9 702 669 0 0 0 chrUextra 15396473 15396544 -13608112 - NTS_DM Other Other -169 71 1 9 702 1986 0 17 13 chrUextra 15396544 15396783 -13607873 - NTS_DM Other Other 0 240 1 9 702 1986 0 17 13 chrUextra 15396783 15397022 -13607634 - NTS_DM Other Other 0 240 1 9 702 1208 6 24 18 chrUextra 15397022 15397186 -13607470 - NTS_DM Other Other 0 240 76 9 702 3174 181 19 11 chrUextra 15397294 15397997 -13606659 - SAR_DM Satellite Satellite -535 937 230 9 702 6025 22 0 0 chrUextra 15398099 15398812 -13605844 + MDG3_I LTR Gypsy 1652 2364 -2622 9 702 6488 13 0 0 chrUextra 15399725 15400438 -13604218 - BATUMI_I LTR Pao -2422 5541 4829 9 702 6206 30 0 0 chrUextra 15400538 15401251 -13603405 - R1_DM LINE R1 -1966 3390 2678 9 702 3493 189 4 18 chrUextra 15401353 15402064 -13602592 - HETA LINE telomeric -2424 3657 2957 9 702 2361 281 12 10 chrUextra 15402184 15402872 -13601784 - Gypsy_I LTR Gypsy -3405 3102 2414 9 702 2147 69 95 0 chrUextra 15402990 15403294 -13601362 - TC1_DM DNA Tc1 -251 1415 1083 9 702 1438 86 43 0 chrUextra 15403262 15403472 -13601184 - TC1_DM DNA Tc1 -1447 219 1 9 702 1448 19 0 5 chrUextra 15403790 15404001 -13600655 + (TATAA)n Simple_repeat Simple_repeat 1 210 0 9 702 526 338 70 24 chrUextra 15404172 15404503 -13600153 - BLASTOPIA_I LTR Gypsy -1285 3196 2851 9 702 6640 0 0 1 chrUextra 15404604 15405316 -13599340 + LSU-rRNA_Dme rRNA rRNA 2746 3456 -444 9 702 6521 3 0 0 chrUextra 15405416 15406129 -13598527 + R1_DM LINE R1 2416 3128 -2228 9 702 251 247 49 0 chrUextra 15406324 15406405 -13598251 - ROVER-I_DM LTR Gypsy -775 5809 5725 9 702 6332 21 1 0 chrUextra 15407042 15407754 -13596902 - R1_DM LINE R1 -2755 2601 1889 9 702 6232 25 4 0 chrUextra 15407855 15408568 -13596088 - R1_DM LINE R1 -1834 3522 2807 9 702 1973 85 49 71 chrUextra 15408668 15409036 -13595620 + ROVER-LTR_DM LTR Gypsy 8 367 0 9 702 342 211 105 0 chrUextra 15409036 15409131 -13595525 + ROVER-I_DM LTR Gypsy 1 105 -6479 9 702 702 177 0 0 chrUextra 15409481 15409611 -13595045 - ARS406_DM Unknown Unknown -223 130 1 9 702 3070 181 36 14 chrUextra 15409503 15410194 -13594462 + SAR_DM Satellite Satellite 180 885 -587 9 702 6526 0 3 4 chrUextra 15410294 15411007 -13593649 + SSU-rRNA_Dme rRNA rRNA 1097 1808 -187 9 702 607 0 0 0 chrUextra 15411107 15411172 -13593484 + QUASIMODO_I LTR Gypsy 5996 6060 0 9 702 5946 3 0 0 chrUextra 15411172 15411820 -13592836 + QUASIMODO_LTR LTR Gypsy 1 648 -10 9 702 5172 112 1 0 chrUextra 15411920 15412633 -13592023 - HMSBEAGLE_I LTR Gypsy -1535 4994 4281 9 702 6450 11 1 0 chrUextra 15412733 15413446 -13591210 - G_DM LINE Jockey -2587 1759 1046 9 702 6483 8 0 0 chrUextra 15413546 15414259 -13590397 + DMRT1B LINE R1 1351 2063 -3120 9 702 4718 0 2 0 chrUextra 15414359 15414864 -13589792 + LSU-rRNA_Dme rRNA rRNA 3395 3900 0 9 702 266 196 0 19 chrUextra 15414965 15415017 -13589639 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 702 6201 20 39 0 chrUextra 15415172 15415885 -13588771 - R1_DM LINE R1 -740 4616 3876 9 702 6506 1 1 4 chrUextra 15415986 15416698 -13587958 + SSU-rRNA_Dme rRNA rRNA 653 1362 -633 9 702 277 352 95 7 chrUextra 15417132 15417427 -13587229 + BLASTOPIA_I LTR Gypsy 4160 4480 -1 9 702 333 0 0 0 chrUextra 15417611 15417648 -13587008 + (TTCTC)n Simple_repeat Simple_repeat 2 38 0 9 702 6207 21 1 3 chrUextra 15418424 15419137 -13585519 + R1_DM LINE R1 3527 4238 -1118 9 702 6168 1 0 5 chrUextra 15419237 15419907 -13584749 + R2_DM LINE R2 2932 3598 -9 9 702 414 43 0 0 chrUextra 15419903 15419950 -13584706 + LSU-rRNA_Dme rRNA rRNA 2578 2624 -1276 9 702 294 143 0 0 chrUextra 15420539 15420588 -13584068 + (GGAGAA)n Simple_repeat Simple_repeat 5 53 0 9 702 1032 70 17 17 chrUextra 15420588 15420763 -13583893 + (GAGAA)n Simple_repeat Simple_repeat 4 178 0 9 702 6392 1 0 0 chrUextra 15420863 15421576 -13583080 + STALKER4_I LTR Gypsy 3166 3878 -2652 9 702 6326 13 1 0 chrUextra 15421676 15422389 -13582267 + IVK_DM LINE I 1585 2298 -3104 9 702 6485 7 0 0 chrUextra 15422489 15423202 -13581454 + DMRT1B LINE R1 3942 4654 -529 9 702 2278 183 18 17 chrUextra 15423302 15424009 -13580647 + SAR_DM Satellite Satellite 1 707 -216 9 702 6455 8 0 1 chrUextra 15424115 15424828 -13579828 + R1_DM LINE R1 4301 5012 -344 9 702 6523 1 1 4 chrUextra 15424928 15425641 -13579015 + SSU-rRNA_Dme rRNA rRNA 956 1666 -329 9 702 3235 179 11 11 chrUextra 15425741 15426453 -13578203 - SAR_DM Satellite Satellite -594 878 167 9 702 6305 25 0 1 chrUextra 15427367 15428080 -13576576 + R2_DM LINE R2 2195 2906 -701 9 702 516 241 0 0 chrUextra 15428660 15428887 -13575769 + (TAAG)n Simple_repeat Simple_repeat 1 227 0 9 702 2582 98 14 16 chrUextra 15428999 15429703 -13574953 + DMSAT6 Satellite Satellite 1 703 0 9 702 22 35 0 0 chrUextra 15430013 15430042 -13574614 + AT_rich Low_complexity Low_complexity 1 29 0 9 702 206 194 32 0 chrUextra 15430236 15430298 -13574358 + (TTA)n Simple_repeat Simple_repeat 2 65 0 9 702 6589 0 0 0 chrUextra 15430622 15431332 -13573324 + FW_DM LINE Jockey 3466 4175 -517 9 702 1286 7 0 0 chrUextra 15431432 15431572 -13573084 - LSU-rRNA_Dme rRNA rRNA -1121 2779 2640 9 702 5275 7 0 0 chrUextra 15431570 15432145 -13572511 - R1_DM LINE R1 0 5356 4782 9 702 6571 4 0 0 chrUextra 15432245 15432958 -13571698 - R1_DM LINE R1 -2874 2482 1770 9 702 40 21 0 0 chrUextra 15433229 15433276 -13571380 + AT_rich Low_complexity Low_complexity 1 47 0 9 702 1117 21 0 0 chrUextra 15433871 15434015 -13570641 - PROTOP_A DNA P -441 664 521 9 702 3006 31 0 0 chrUextra 15434018 15434368 -13570288 - PROTOP_A DNA P -714 391 42 9 702 1067 160 128 0 chrUextra 15434365 15434584 -13570072 - IDEFIX_I LTR Gypsy -1083 4545 4299 9 702 1529 0 0 0 chrUextra 15434684 15434866 -13569790 + FW_DM LINE Jockey 4511 4692 0 9 702 6242 22 41 0 chrUextra 15436310 15437023 -13567633 + DIVER_I LTR Pao 751 1492 -4151 9 702 2219 105 13 95 chrUextra 15437148 15437834 -13566822 - DMSAT6 Satellite Satellite 0 629 1 9 702 4156 13 0 0 chrUextra 15437936 15438394 -13566262 + R1_DM LINE R1 4899 5356 0 9 702 1617 72 31 0 chrUextra 15438427 15438649 -13566007 + R1_DM LINE R1 1 229 -5127 9 702 5788 58 1 3 chrUextra 15438752 15439462 -13565194 + BATUMI_I LTR Pao 3546 4254 -3709 9 702 891 51 8 0 chrUextra 15439562 15439680 -13564976 + R1_DM LINE R1 493 611 -4745 9 702 4972 45 2 2 chrUextra 15439680 15440275 -13564381 + R1_DM LINE R1 1103 1697 -3659 9 702 25 31 0 0 chrUextra 15440376 15440408 -13564248 + AT_rich Low_complexity Low_complexity 1 32 0 9 702 23 50 0 48 chrUextra 15440932 15440995 -13563661 + AT_rich Low_complexity Low_complexity 1 60 0 9 702 6511 3 1 3 chrUextra 15441188 15441901 -13562755 + LSU-rRNA_Dme rRNA rRNA 815 1526 -2374 9 702 6198 10 32 1 chrUextra 15442001 15442714 -13561942 - DMRT1B LINE R1 -3813 1370 636 9 702 6385 4 0 3 chrUextra 15442814 15443527 -13561129 + DOC LINE Jockey 1493 2203 -2522 9 702 3122 169 35 23 chrUextra 15443627 15444334 -13560322 - SAR_DM Satellite Satellite -539 933 218 9 702 977 190 14 6 chrUextra 15444440 15445152 -13559504 + SAR_DM Satellite Satellite 1 718 -749 9 702 246 150 0 0 chrUextra 15445275 15445315 -13559341 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 702 246 150 0 0 chrUextra 15445367 15445407 -13559249 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 702 255 125 0 0 chrUextra 15445450 15445490 -13559166 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 702 22 56 0 0 chrUextra 15445503 15445539 -13559117 + AT_rich Low_complexity Low_complexity 1 36 0 9 702 870 9 0 27 chrUextra 15445565 15445677 -13558979 + NTS_DM Other Other 25 133 -107 9 702 1252 18 0 6 chrUextra 15445677 15445842 -13558814 + NTS_DM Other Other 38 201 -39 9 702 538 15 0 42 chrUextra 15445895 15445966 -13558690 + NTS_DM Other Other 25 92 -148 9 702 901 0 9 0 chrUextra 15446066 15446172 -13558484 - ROO_I LTR Pao -8149 107 1 9 702 3719 2 0 2 chrUextra 15446172 15446601 -13558055 - ROO_LTR LTR Pao 0 428 1 9 702 1529 0 0 0 chrUextra 15446601 15446779 -13557877 + ROO_I LTR Pao 6210 6387 -1869 9 702 3448 101 87 33 chrUextra 15446879 15447521 -13557135 - Gypsy12_I LTR Gypsy -4647 899 223 9 702 262 106 0 21 chrUextra 15448180 15448228 -13556428 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 702 351 49 65 16 chrUextra 15448250 15448312 -13556344 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 702 362 204 0 11 chrUextra 15448311 15448405 -13556251 - DMLTR5 LTR Gypsy 0 266 174 9 702 505 359 26 8 chrUextra 15448515 15449009 -13555647 - MICROPIA_I LTR Gypsy -3067 1409 907 9 702 6061 3 0 0 chrUextra 15449318 15450031 -13554625 + STALKER4_I LTR Gypsy 4490 5202 -1328 9 702 360 0 0 0 chrUextra 15450804 15450844 -13553812 + (CTTAT)n Simple_repeat Simple_repeat 1 40 0 9 702 341 0 23 0 chrUextra 15450944 15450988 -13553668 - QUASIMODO_LTR LTR Gypsy -613 45 1 9 702 5134 6 0 1 chrUextra 15450988 15451657 -13552999 - QUASIMODO_I LTR Gypsy 0 6060 5393 9 702 28 48 0 0 chrUextra 15451872 15451914 -13552742 + AT_rich Low_complexity Low_complexity 1 42 0 9 702 32 0 0 0 chrUextra 15452243 15452275 -13552381 + AT_rich Low_complexity Low_complexity 1 32 0 9 702 511 0 0 16 chrUextra 15452407 15452470 -13552186 + SSU-rRNA_Dme rRNA rRNA 1 62 -1933 9 702 5637 31 8 4 chrUextra 15452570 15453283 -13551373 + CIRCE LINE Composite 2021 2736 -3620 9 702 1141 13 13 0 chrUextra 15453383 15453535 -13551121 + Invader1_I LTR Gypsy 3033 3186 0 9 702 3579 14 2 0 chrUextra 15453535 15453957 -13550699 + Invader1_LTR LTR Gypsy 1 423 0 9 702 1187 14 0 0 chrUextra 15453957 15454096 -13550560 + Invader1_I LTR Gypsy 1 139 -3047 9 702 711 98 0 0 chrUextra 15454786 15454909 -13549747 + (CATGT)n Simple_repeat Simple_repeat 2 124 0 9 702 441 42 0 14 chrUextra 15455009 15455082 -13549574 + NTS_DM Other Other 130 201 -39 9 702 870 9 0 27 chrUextra 15455134 15455246 -13549410 + NTS_DM Other Other 25 133 -107 9 702 1252 18 0 6 chrUextra 15455246 15455411 -13549245 + NTS_DM Other Other 38 201 -39 9 702 21 57 0 0 chrUextra 15455411 15455446 -13549210 + AT_rich Low_complexity Low_complexity 1 35 0 9 702 832 9 9 27 chrUextra 15455472 15455583 -13549073 + NTS_DM Other Other 25 133 -107 9 702 817 0 0 0 chrUextra 15455583 15455679 -13548977 + NTS_DM Other Other 38 133 -107 9 702 304 70 0 0 chrUextra 15455679 15455722 -13548934 + NTS_DM Other Other 38 80 -160 9 702 6024 1 0 1 chrUextra 15455822 15456533 -13548123 + DM176_I LTR Gypsy 3130 3839 -2581 9 702 6162 0 3 0 chrUextra 15456635 15457348 -13547308 - FW_DM LINE Jockey -473 4219 3505 9 702 5685 1 0 35 chrUextra 15457448 15458161 -13546495 - LSU-rRNA_Dme rRNA rRNA -3096 804 117 9 702 4111 0 0 0 chrUextra 15458261 15458745 -13545911 + BARI_DM DNA Tc1 1244 1727 -1 9 702 1982 0 0 0 chrUextra 15458745 15458974 -13545682 + BARI_DM DNA Tc1 4 232 -1496 9 702 5746 14 0 0 chrUextra 15459076 15459787 -13544869 + Invader2_I LTR Gypsy 3019 3729 -863 9 702 201 121 0 0 chrUextra 15460455 15460488 -13544168 + (GA)n Simple_repeat Simple_repeat 1 33 0 9 702 4214 4 2 8 chrUextra 15460700 15461225 -13543431 - Copia_I LTR Copia -629 3964 3443 9 702 1547 0 5 0 chrUextra 15461219 15461413 -13543243 - Copia_I LTR Copia -1836 2757 2563 9 702 1985 8 0 0 chrUextra 15461918 15462158 -13542498 - ALUII_DM Unknown Unknown 0 240 1 9 702 21 57 0 0 chrUextra 15462158 15462193 -13542463 + AT_rich Low_complexity Low_complexity 1 35 0 9 702 3056 176 13 11 chrUextra 15462326 15463039 -13541617 - SAR_DM Satellite Satellite -553 919 206 9 702 5801 21 30 0 chrUextra 15463139 15463852 -13540804 + FW_DM LINE Jockey 374 1107 -3585 9 702 6230 0 0 1 chrUextra 15463952 15464665 -13539991 + SSU-rRNA_Dme rRNA rRNA 416 1127 -868 9 702 6000 18 0 0 chrUextra 15464765 15465478 -13539178 - Copia2_I LTR Copia -2074 2088 1376 9 702 5733 17 42 3 chrUextra 15465578 15466291 -13538365 + DOC LINE Jockey 3254 3994 -731 9 87 843 97 0 0 chrUextra 15466391 15466536 -13538120 + (TCTTG)n Simple_repeat Simple_repeat 4 148 0 9 703 2916 183 34 11 chrUextra 15467205 15467917 -13536739 + SAR_DM Satellite Satellite 278 1005 -467 9 703 4182 91 76 32 chrUextra 15468017 15468730 -13535926 - Gypsy12_I LTR Gypsy -4415 1131 388 9 703 5836 24 1 0 chrUextra 15468830 15469543 -13535113 - R1_DM LINE R1 -1541 3815 3102 9 703 3524 134 3 3 chrUextra 15469645 15470356 -13534300 - BATUMI_I LTR Pao -3248 4666 3880 9 703 1346 128 11 32 chrUextra 15470459 15470742 -13533914 + TAHRE LINE telomeric 10176 10452 -11 9 703 1290 147 45 73 chrUextra 15470741 15471167 -13533489 + HETA LINE telomeric 190 603 -5478 9 703 5369 0 2 0 chrUextra 15472082 15472695 -13531961 + SSU-rRNA_Dme rRNA rRNA 1382 1995 0 9 703 241 35 0 0 chrUextra 15472899 15472928 -13531728 + MICROPIA_LTR LTR Gypsy 448 476 0 9 703 3648 2 5 0 chrUextra 15472936 15473357 -13531299 + Invader1_LTR LTR Gypsy 1 423 0 9 703 1429 12 0 0 chrUextra 15473357 15473527 -13531129 + Copia2_LTR_DM LTR Copia 29 198 0 9 703 4795 0 0 0 chrUextra 15473708 15474262 -13530394 + DMRT1B LINE R1 4516 5069 -114 9 703 5234 41 38 4 chrUextra 15474521 15475208 -13529448 + DMCR1A LINE CR1 1163 1872 -2598 9 703 1548 0 0 0 chrUextra 15475334 15475506 -13529150 + (CACAA)n Simple_repeat Simple_repeat 5 176 0 9 703 4570 9 0 0 chrUextra 15475506 15476047 -13528609 - DMRT1B LINE R1 -140 5043 4503 9 703 1041 94 0 0 chrUextra 15476150 15476438 -13528218 + (CATGT)n Simple_repeat Simple_repeat 1 288 0 9 703 2346 214 37 6 chrUextra 15476960 15477632 -13527024 - SAR_DM Satellite Satellite -589 883 191 9 703 652 172 0 0 chrUextra 15477537 15477671 -13526985 + ARS406_DM Unknown Unknown 3 136 -217 9 703 4009 135 16 0 chrUextra 15477777 15478479 -13526177 - TART_B1 LINE telomeric -8959 1695 983 9 703 3617 27 0 5 chrUextra 15478586 15479030 -13525626 + R1_DM LINE R1 4915 5356 0 9 703 1753 68 8 0 chrUextra 15479051 15479299 -13525357 + R1_DM LINE R1 23 272 -5084 9 703 4747 89 3 4 chrUextra 15479401 15480112 -13524544 + S_DM DNA Tc1 67 776 -960 9 703 6068 7 1 0 chrUextra 15480212 15480925 -13523731 + Gypsy6_I LTR Gypsy 1521 2234 -4778 9 703 3211 51 83 60 chrUextra 15481025 15481738 -13522918 + ROO_I LTR Pao 305 1457 -6799 9 703 3749 0 0 0 chrUextra 15481838 15482279 -13522377 + BARI_DM DNA Tc1 1287 1727 -1 9 703 2374 0 0 0 chrUextra 15482279 15482551 -13522105 + BARI_DM DNA Tc1 4 275 -1453 9 703 5929 10 0 13 chrUextra 15482651 15483364 -13521292 - FW_DM LINE Jockey -2149 2543 1840 9 703 6070 1 1 3 chrUextra 15483464 15484177 -13520479 + LSU-rRNA_Dme rRNA rRNA 630 1341 -2559 9 703 32 26 0 0 chrUextra 15484783 15484822 -13519834 + AT_rich Low_complexity Low_complexity 1 39 0 9 703 234 225 117 75 chrUextra 15484868 15484988 -13519668 + TAHRE LINE telomeric 9807 9931 -532 9 703 6076 3 1 0 chrUextra 15485090 15485803 -13518853 - ROO_I LTR Pao -284 7972 7259 9 703 262 106 0 21 chrUextra 15486552 15486600 -13518056 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 703 1424 0 0 0 chrUextra 15486716 15486880 -13517776 - LSU-rRNA_Dme rRNA rRNA -3736 164 1 9 703 21 95 0 0 chrUextra 15486892 15486955 -13517701 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15487168 15487209 -13517447 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 2651 73 0 11 chrUextra 15487529 15487901 -13516755 + Gypsy12_I LTR Gypsy 5179 5546 0 9 703 1463 193 15 29 chrUextra 15487901 15488242 -13516414 + Gypsy12_LTR LTR Gypsy 1 336 -2000 9 703 2969 175 9 9 chrUextra 15488344 15489020 -13515636 - SAR_DM Satellite Satellite -602 870 195 9 703 863 78 0 0 chrUextra 15488927 15489055 -13515601 + ARS406_DM Unknown Unknown 1 128 -225 9 703 5930 18 0 1 chrUextra 15489155 15489868 -13514788 - R1_DM LINE R1 -2988 2368 1657 9 703 4393 89 35 4 chrUextra 15489970 15490679 -13513977 - TART LINE telomeric -13198 1279 549 9 703 5873 14 1 1 chrUextra 15491594 15492304 -13512352 + R1_DM LINE R1 3424 4133 -1223 9 703 5823 13 25 0 chrUextra 15492406 15493118 -13511538 - Invader3_I LTR Gypsy -1777 3111 2382 9 703 2838 176 41 13 chrUextra 15493222 15493930 -13510726 + SAR_DM Satellite Satellite 195 922 -550 9 703 3755 105 20 2 chrUextra 15494030 15494742 -13509914 - IDEFIX_I LTR Gypsy -3416 2644 1497 9 703 816 114 12 8 chrUextra 15494842 15495094 -13509562 + (AATAG)n Simple_repeat Simple_repeat 1 253 0 9 703 1252 59 3 48 chrUextra 15495132 15495505 -13509151 + (AATAG)n Simple_repeat Simple_repeat 1 356 0 9 703 2916 179 11 21 chrUextra 15495655 15496357 -13508299 + SAR_DM Satellite Satellite 425 1119 -353 9 703 6007 1 4 4 chrUextra 15496466 15497178 -13507478 + LSU-rRNA_Dme rRNA rRNA 1045 1756 -2144 9 703 5937 25 0 0 chrUextra 15497278 15497990 -13506666 - R1_DM LINE R1 -611 4745 4034 9 703 327 233 0 0 chrUextra 15498091 15498194 -13506462 + (CAAA)n Simple_repeat Simple_repeat 4 106 0 9 703 3465 0 0 2 chrUextra 15498226 15498629 -13506027 - STALKER4_LTR LTR Gypsy 0 402 1 9 703 1375 0 0 0 chrUextra 15498629 15498802 -13505854 - STALKER4_I LTR Gypsy 0 6530 6358 9 703 489 73 0 0 chrUextra 15498902 15498970 -13505686 - HETA LINE telomeric -4120 1961 1894 9 703 2543 138 75 2 chrUextra 15498966 15499614 -13505042 - HETA LINE telomeric -4524 1557 697 9 703 2007 63 0 0 chrUextra 15499716 15500000 -13504656 + TART LINE telomeric 9287 9570 -4907 9 703 2972 50 43 7 chrUextra 15500000 15500422 -13504234 + HETA LINE telomeric 5081 5517 -564 9 703 3146 172 11 10 chrUextra 15500526 15501238 -13503418 - SAR_DM Satellite Satellite -457 1015 303 9 703 3079 147 25 53 chrUextra 15501338 15502050 -13502606 + TART LINE telomeric 9614 10305 -4172 9 703 2719 193 17 9 chrUextra 15502160 15502849 -13501807 - SAR_DM Satellite Satellite -396 1076 382 9 703 6033 8 0 0 chrUextra 15502962 15503674 -13500982 + DMRT1B LINE R1 3860 4571 -612 9 703 378 0 0 0 chrUextra 15503774 15503816 -13500840 + (CACAA)n Simple_repeat Simple_repeat 2 43 0 9 703 3050 169 29 11 chrUextra 15504586 15505286 -13499370 - SAR_DM Satellite Satellite -435 1037 326 9 703 28 48 0 0 chrUextra 15505495 15505537 -13499119 + AT_rich Low_complexity Low_complexity 1 42 0 9 703 406 0 37 0 chrUextra 15505756 15505810 -13498846 + (TA)n Simple_repeat Simple_repeat 2 57 0 9 703 1711 15 0 0 chrUextra 15505907 15506110 -13498546 + SSU-rRNA_Dme rRNA rRNA 1 203 -1792 9 703 5942 18 1 3 chrUextra 15506210 15506922 -13497734 - MICROPIA_I LTR Gypsy -3557 919 209 9 703 5943 6 0 0 chrUextra 15507028 15507734 -13496922 + G6_DM LINE Jockey 68 773 -1269 9 703 3000 176 7 7 chrUextra 15507834 15508509 -13496147 - SAR_DM Satellite Satellite -603 869 195 9 703 762 115 0 0 chrUextra 15508416 15508546 -13496110 + ARS406_DM Unknown Unknown 1 130 -223 9 703 2747 179 20 27 chrUextra 15508646 15509354 -13495302 + SAR_DM Satellite Satellite 462 1164 -308 9 703 6101 0 0 0 chrUextra 15509458 15510170 -13494486 + STALKER4_I LTR Gypsy 4457 5168 -1362 9 703 1722 19 0 23 chrUextra 15510270 15510488 -13494168 + BATUMI_I LTR Pao 7090 7302 -661 9 703 4053 10 0 4 chrUextra 15510501 15510982 -13493674 - BATUMI_I LTR Pao -1543 6420 5942 9 703 6215 0 1 1 chrUextra 15511082 15511794 -13492862 + LSU-rRNA_Dme rRNA rRNA 3166 3877 -23 9 703 4316 0 0 2 chrUextra 15511894 15512396 -13492260 - ACCORD_LTR LTR Gypsy -57 501 1 9 703 1738 18 4 22 chrUextra 15512396 15512606 -13492050 - R1_DM LINE R1 -2231 3125 2920 9 703 6116 1 1 3 chrUextra 15512706 15513418 -13491238 + LSU-rRNA_Dme rRNA rRNA 926 1636 -2264 9 703 2896 3 0 0 chrUextra 15513889 15514230 -13490426 + IDEFIX_I LTR Gypsy 1 341 -5287 9 703 2321 0 0 82 chrUextra 15514330 15514646 -13490010 - LSU-rRNA_Dme rRNA rRNA -3610 290 1 9 703 21 95 0 0 chrUextra 15514658 15514721 -13489935 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15514934 15514975 -13489681 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 5641 0 0 1 chrUextra 15515185 15515854 -13488802 + LSU-rRNA_Dme rRNA rRNA 218 885 -3015 9 703 6056 0 0 0 chrUextra 15515954 15516666 -13487990 - MDG3_I LTR Gypsy -1041 3945 3234 9 703 1998 178 51 36 chrUextra 15516767 15517293 -13487363 + Stalker2_I LTR Gypsy 322 855 -6547 9 703 1227 0 0 0 chrUextra 15517336 15517478 -13487178 + STALKER4_I LTR Gypsy 1681 1822 -4708 9 703 2051 27 0 0 chrUextra 15517578 15517834 -13486822 - FW_DM LINE Jockey -3046 1646 1391 9 703 3723 13 0 4 chrUextra 15517829 15518290 -13486366 - DOC LINE Jockey 0 4725 4267 9 703 5927 10 1 0 chrUextra 15518390 15519102 -13485554 + QUASIMODO_I LTR Gypsy 2401 3113 -2947 9 703 520 16 0 0 chrUextra 15520014 15520076 -13484580 - PROTOP_A DNA P -1043 62 1 9 703 3437 65 402 0 chrUextra 15520079 15520726 -13483930 - TART LINE telomeric -11959 2518 1612 9 703 1767 14 0 0 chrUextra 15522450 15522661 -13481995 - MAX_LTR LTR Pao -110 211 1 9 703 363 145 0 80 chrUextra 15522677 15522752 -13481904 - HETRP_DM Satellite Satellite -286 1586 1518 9 703 669 179 7 14 chrUextra 15522868 15523010 -13481646 - HETRP_DM Satellite Satellite -203 1669 1529 9 703 21 89 0 0 chrUextra 15523487 15523543 -13481113 + AT_rich Low_complexity Low_complexity 1 56 0 9 703 3611 0 2 0 chrUextra 15523562 15523974 -13480682 - SSU-rRNA_Dme rRNA rRNA 0 1995 1583 9 703 2582 251 1 1 chrUextra 15524074 15524781 -13479875 + ROVER-I_DM LTR Gypsy 3128 3834 -2750 9 703 5944 10 0 0 chrUextra 15524886 15525598 -13479058 - STALKER4_I LTR Gypsy -3686 2844 2133 9 703 1711 64 7 47 chrUextra 15525706 15525983 -13478673 + TAHRE LINE telomeric 10186 10451 -12 9 703 1479 171 98 54 chrUextra 15525982 15526409 -13478247 + TAHRE LINE telomeric 7044 7489 -2974 9 703 1165 7 28 0 chrUextra 15526514 15526658 -13477998 + (TTATA)n Simple_repeat Simple_repeat 1 148 0 9 703 1755 112 46 31 chrUextra 15526659 15527010 -13477646 - ROVER-LTR_DM LTR Gypsy -11 356 1 9 703 866 159 90 19 chrUextra 15527010 15527222 -13477434 - ROVER-I_DM LTR Gypsy 0 6584 6358 9 703 2461 82 18 21 chrUextra 15527323 15528034 -13476622 + DMSAT6 Satellite Satellite 1 708 -71 9 703 5629 20 1 4 chrUextra 15528134 15528846 -13475810 - PROTOP_A DNA P -65 1040 331 9 703 6066 1 0 1 chrUextra 15528948 15529658 -13474998 - LSU-rRNA_Dme rRNA rRNA -2644 1256 548 9 703 318 293 22 22 chrUextra 15529888 15530066 -13474590 - MDG3_I LTR Gypsy -1546 3440 3263 9 703 274 310 1 1 chrUextra 15530352 15530469 -13474187 - Invader2_I LTR Gypsy -1843 2749 2650 9 703 30 27 0 0 chrUextra 15530777 15530814 -13473842 + AT_rich Low_complexity Low_complexity 1 37 0 9 703 192 40 0 0 chrUextra 15530931 15530956 -13473700 + (TAA)n Simple_repeat Simple_repeat 1 25 0 9 703 21 95 0 0 chrUextra 15531404 15531467 -13473189 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15531680 15531721 -13472935 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 5932 8 3 3 chrUextra 15532194 15532906 -13471750 - R1_DM LINE R1 -881 4475 3764 9 703 6147 4 0 0 chrUextra 15533006 15533718 -13470938 + DMRT1B LINE R1 1444 2155 -3028 9 703 2102 28 0 0 chrUextra 15533818 15534070 -13470586 - R1_DM LINE R1 -1979 3377 3126 9 703 3979 2 0 0 chrUextra 15534070 15534530 -13470126 + ACCORD_LTR LTR Gypsy 1 460 -98 9 703 317 281 104 86 chrUextra 15534943 15535223 -13469433 - Invader1_LTR LTR Gypsy -55 368 84 9 703 26 30 0 0 chrUextra 15535465 15535498 -13469158 + AT_rich Low_complexity Low_complexity 1 33 0 9 703 879 178 102 15 chrUextra 15536665 15536870 -13467786 + DMLTR5 LTR Gypsy 44 266 0 9 703 348 111 32 0 chrUextra 15536869 15536932 -13467724 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 703 889 178 102 15 chrUextra 15537457 15537662 -13466994 + DMLTR5 LTR Gypsy 44 266 0 9 703 298 64 0 21 chrUextra 15537726 15537774 -13466882 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 703 1149 75 40 0 chrUextra 15537881 15538054 -13466602 - MDG1_I LTR Gypsy -1016 5580 5401 9 703 3788 49 23 4 chrUextra 15538059 15538590 -13466066 - DM297_I LTR Gypsy -1816 4351 3811 9 703 5978 7 0 0 chrUextra 15538692 15539402 -13465254 + MDG3_I LTR Gypsy 2955 3664 -1322 9 703 2422 89 26 14 chrUextra 15539502 15540198 -13464458 + DMSAT6 Satellite Satellite 1 704 -40 9 703 6039 4 0 0 chrUextra 15540314 15541026 -13463630 + ROO_I LTR Pao 5924 6635 -1621 9 703 6204 1 1 0 chrUextra 15541126 15541838 -13462818 + DOC LINE Jockey 3676 4388 -337 9 703 2582 0 0 3 chrUextra 15541938 15542240 -13462416 + Stalker2_LTR LTR Gypsy 124 424 0 9 703 3458 2 12 0 chrUextra 15542240 15542650 -13462006 + Stalker2_I LTR Gypsy 1 415 -6987 9 703 6206 1 0 0 chrUextra 15542750 15543462 -13461194 + ROO_I LTR Pao 6920 7631 -625 9 703 5916 14 1 3 chrUextra 15544374 15545086 -13459570 - DM1731_I LTR Copia -2993 983 273 9 703 5910 14 4 0 chrUextra 15545186 15545898 -13458758 + DM1731_I LTR Copia 345 1059 -2917 9 703 3502 26 2 0 chrUextra 15545998 15546428 -13458228 + R1_DM LINE R1 4926 5356 0 9 703 1747 72 8 0 chrUextra 15546461 15546710 -13457946 + R1_DM LINE R1 1 251 -5105 9 703 2647 175 25 31 chrUextra 15546810 15547522 -13457134 - SAR_DM Satellite Satellite -1019 707 1 9 703 2592 214 74 8 chrUextra 15547625 15548328 -13456328 - TAHRE LINE telomeric -8950 1513 765 9 703 22 0 0 0 chrUextra 15548443 15548465 -13456191 + AT_rich Low_complexity Low_complexity 1 22 0 9 703 2997 230 5 3 chrUextra 15548474 15549145 -13455511 - Gypsy6_I LTR Gypsy -1694 5318 4647 9 703 2890 188 16 22 chrUextra 15549246 15549957 -13454699 - SAR_DM Satellite Satellite -614 706 1 9 703 4905 61 30 1 chrUextra 15550062 15550769 -13453887 + IDEFIX_I LTR Gypsy 4318 5044 -584 9 703 412 269 154 23 chrUextra 15550910 15551169 -13453487 + BURDOCK_I LTR Gypsy 1560 1852 -4008 9 703 1314 29 6 39 chrUextra 15551195 15551377 -13453279 - G5A_DM LINE Jockey -3 2838 2663 9 703 329 305 0 0 chrUextra 15551378 15551506 -13453150 + Gypsy7_I LTR Gypsy 1239 1366 -3618 9 703 2900 183 13 22 chrUextra 15551683 15552394 -13452262 - SAR_DM Satellite Satellite -369 1103 400 9 703 3996 101 82 28 chrUextra 15552494 15553205 -13451451 - TART LINE telomeric -3842 10635 9887 9 703 3096 169 11 10 chrUextra 15553311 15554012 -13450644 - SAR_DM Satellite Satellite -478 994 293 9 703 256 128 0 0 chrUextra 15554118 15554165 -13450491 - ARS406_DM Unknown Unknown -306 47 1 9 703 3029 173 16 13 chrUextra 15554125 15554815 -13449841 + SAR_DM Satellite Satellite 246 937 -535 9 703 888 73 7 0 chrUextra 15554693 15554830 -13449826 - ARS406_DM Unknown Unknown -164 189 52 9 703 3167 173 7 8 chrUextra 15554932 15555636 -13449020 - SAR_DM Satellite Satellite -401 1071 369 9 703 6414 15 0 0 chrUextra 15555742 15556454 -13448202 - Gypsy4_I LTR Gypsy -1689 4599 3888 9 703 5353 29 10 3 chrUextra 15556638 15557266 -13447390 + NINJA_I LTR Pao 1955 2586 -3425 9 703 6535 3 0 0 chrUextra 15558178 15558890 -13445766 + R1_DM LINE R1 2616 3327 -2029 9 703 1324 30 0 12 chrUextra 15559802 15559973 -13444683 + (TTCTC)n Simple_repeat Simple_repeat 2 170 0 9 703 416 87 19 78 chrUextra 15559979 15560509 -13444147 + CT-rich Low_complexity Low_complexity 1 498 0 9 703 213 39 0 0 chrUextra 15561636 15561662 -13442994 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 703 1012 0 0 0 chrUextra 15562238 15562349 -13442307 + R1_DM LINE R1 4956 5066 -290 9 703 974 44 0 0 chrUextra 15562346 15562460 -13442196 + R1_DM LINE R1 5243 5356 0 9 703 3521 68 9 4 chrUextra 15562493 15562949 -13441707 + R1_DM LINE R1 1 458 -4898 9 703 254 306 110 70 chrUextra 15563051 15563734 -13440922 - Copia2_I LTR Copia -2956 1206 497 9 703 6068 0 0 35 chrUextra 15564674 15565386 -13439270 + LSU-rRNA_Dme rRNA rRNA 80 766 -3134 9 703 6400 0 4 0 chrUextra 15565486 15566198 -13438458 - ACCORD2_I LTR Gypsy -1132 6080 5366 9 703 3668 72 42 29 chrUextra 15567110 15567822 -13436834 + PROTOP_A DNA P 467 1135 -18 9 703 1218 244 49 8 chrUextra 15568056 15568634 -13436022 + Gypsy8_I LTR Gypsy 1035 1193 -3154 9 703 6434 4 3 1 chrUextra 15568734 15569446 -13435210 - R1_DM LINE R1 -3603 1753 1041 9 703 6577 6 0 0 chrUextra 15569547 15570258 -13434398 - DM1731_I LTR Copia -924 3052 2342 9 703 6545 1 0 0 chrUextra 15570358 15571070 -13433586 + R1_DM LINE R1 2601 3312 -2044 9 703 6571 4 0 0 chrUextra 15571171 15571882 -13432774 - G_DM LINE Jockey -872 3474 2764 9 703 5524 65 41 3 chrUextra 15571982 15572694 -13431962 + R1_DM LINE R1 14 752 -4604 9 703 378 179 0 0 chrUextra 15572803 15572898 -13431758 + (CATAA)n Simple_repeat Simple_repeat 5 99 0 9 703 5411 90 0 13 chrUextra 15573606 15574318 -13430338 - Gypsy12_I LTR Gypsy -150 5396 4694 9 703 1247 68 0 35 chrUextra 15574961 15575130 -13429526 - TART LINE telomeric -6734 7743 7581 9 703 6364 8 4 1 chrUextra 15575230 15575942 -13428714 + R1_DM LINE R1 3601 4314 -1042 9 703 3133 94 51 21 chrUextra 15576045 15576754 -13427902 - TART LINE telomeric -6799 7678 7216 9 703 266 196 0 19 chrUextra 15576862 15576914 -13427742 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 703 266 196 0 19 chrUextra 15576954 15577006 -13427650 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 703 277 176 0 19 chrUextra 15577037 15577089 -13427567 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 703 22 56 0 0 chrUextra 15577102 15577138 -13427518 + AT_rich Low_complexity Low_complexity 1 36 0 9 703 928 9 0 27 chrUextra 15577164 15577276 -13427380 + NTS_DM Other Other 25 133 -107 9 703 1332 18 0 6 chrUextra 15577276 15577441 -13427215 + NTS_DM Other Other 38 201 -39 9 703 410 0 0 0 chrUextra 15577522 15577566 -13427090 + NTS_DM Other Other 1 44 -196 9 703 6286 32 0 0 chrUextra 15577666 15578378 -13426278 + DIVER_I LTR Pao 4812 5523 -120 9 703 2322 11 7 11 chrUextra 15578480 15578756 -13425900 + BLASTOPIA_LTR LTR Gypsy 1 275 0 9 703 3941 2 2 0 chrUextra 15578756 15579190 -13425466 + BLASTOPIA_I LTR Gypsy 1 435 -4046 9 703 6357 20 0 0 chrUextra 15579290 15580002 -13424654 - DMRT1A LINE R1 -1137 4046 3335 9 703 6672 1 0 0 chrUextra 15580102 15580814 -13423842 - Copia2_I LTR Copia -526 3636 2925 9 703 4481 128 3 24 chrUextra 15581726 15582437 -13422219 + Gypsy12_I LTR Gypsy 2313 3008 -2538 9 703 1347 16 21 21 chrUextra 15582539 15582725 -13421931 + NTS_DM Other Other 55 240 0 9 703 1880 17 17 17 chrUextra 15582725 15582965 -13421691 + NTS_DM Other Other 1 240 0 9 703 1869 21 17 17 chrUextra 15582965 15583205 -13421451 + NTS_DM Other Other 1 240 0 9 703 403 22 0 0 chrUextra 15583205 15583250 -13421406 + NTS_DM Other Other 1 45 -195 9 703 5236 61 43 14 chrUextra 15583350 15584062 -13420594 + BATUMI_I LTR Pao 3064 3796 -4167 9 703 3489 162 13 10 chrUextra 15584175 15584874 -13419782 - SAR_DM Satellite Satellite -396 1076 376 9 703 3273 179 14 9 chrUextra 15584987 15585684 -13418972 - SAR_DM Satellite Satellite -396 1076 376 9 703 5505 39 0 15 chrUextra 15585786 15586498 -13418158 + IDEFIX_I LTR Gypsy 4453 5153 -475 9 703 5399 82 3 3 chrUextra 15586598 15587310 -13417346 - HETA LINE telomeric -3501 2580 1869 9 703 6534 1 1 3 chrUextra 15587410 15588122 -13416534 + SSU-rRNA_Dme rRNA rRNA 883 1593 -402 9 703 2917 48 57 0 chrUextra 15588223 15588594 -13416062 + PROTOP_A DNA P 714 1105 0 9 703 4228 41 22 9 chrUextra 15589034 15589581 -13415075 - BATUMI_I LTR Pao -7409 554 1 9 703 1270 43 6 24 chrUextra 15589581 15589746 -13414910 - BATUMI_LTR LTR Pao 0 272 111 9 703 6328 22 0 0 chrUextra 15589846 15590558 -13414098 - MAX_I LTR Pao -5412 2502 1791 9 703 6249 23 1 0 chrUextra 15590662 15591370 -13413286 - R1_DM LINE R1 -1755 3601 2893 9 703 3049 175 46 11 chrUextra 15591470 15592171 -13412485 - SAR_DM Satellite Satellite -524 948 224 9 703 3260 0 0 0 chrUextra 15592282 15592635 -13412021 - ROO_I LTR Pao -7903 353 1 9 703 3380 0 0 0 chrUextra 15592635 15592994 -13411662 - ROO_LTR LTR Pao 0 428 70 9 703 1827 253 12 64 chrUextra 15593095 15593691 -13410965 + Gypsy12_LTR LTR Gypsy 208 772 -1564 9 703 3644 49 5 60 chrUextra 15593906 15594511 -13410145 - CIRCE LINE Composite -858 5498 4981 9 703 5996 30 31 0 chrUextra 15595530 15596242 -13408414 - R1_DM LINE R1 -2536 2820 2087 9 703 2250 0 0 89 chrUextra 15596342 15596633 -13408023 - LSU-rRNA_Dme rRNA rRNA -3635 265 1 9 703 21 95 0 0 chrUextra 15596645 15596708 -13407948 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15596921 15596962 -13407694 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 724 0 0 0 chrUextra 15597154 15597234 -13407422 - Copia2_LTR_DM LTR Copia -90 108 29 9 87 3857 9 5 0 chrUextra 15597234 15597655 -13407001 - Invader1_LTR LTR Gypsy 0 423 1 9 704 1739 15 5 5 chrUextra 15597663 15597866 -13406790 - MICROPIA_LTR LTR Gypsy 0 476 274 9 704 5555 2 0 0 chrUextra 15597966 15598562 -13406094 - DOC LINE Jockey -449 4276 3681 9 704 6691 0 0 0 chrUextra 15598778 15599490 -13405166 - NOMAD_I LTR Gypsy -2777 3795 3084 9 704 2600 13 0 0 chrUextra 15599590 15599888 -13404768 + FW_DM LINE Jockey 4395 4692 0 9 704 2869 192 32 30 chrUextra 15600402 15601112 -13403544 + SAR_DM Satellite Satellite 462 1173 -299 9 704 3556 25 101 4 chrUextra 15601214 15601926 -13402730 + BLOOD_I LTR Gypsy 164 944 -5669 9 704 502 108 27 0 chrUextra 15602840 15602914 -13401742 - NTS_DM Other Other -161 79 4 9 704 1388 6 0 18 chrUextra 15603024 15603189 -13401467 - NTS_DM Other Other -78 162 1 9 704 1972 4 17 13 chrUextra 15603189 15603428 -13401228 - NTS_DM Other Other 0 240 1 9 704 875 8 33 25 chrUextra 15603428 15603550 -13401106 - NTS_DM Other Other 0 240 118 9 704 6546 1 0 0 chrUextra 15603650 15604362 -13400294 + R1_DM LINE R1 2691 3402 -1954 9 704 3263 179 13 8 chrUextra 15604463 15605166 -13399490 - SAR_DM Satellite Satellite -587 885 180 9 704 24 32 0 0 chrUextra 15605450 15605481 -13399175 + AT_rich Low_complexity Low_complexity 1 31 0 9 704 637 67 11 22 chrUextra 15605581 15605673 -13398983 - BS3_DM LINE Jockey 0 1790 1700 9 704 6526 4 0 1 chrUextra 15606086 15606798 -13397858 + Gypsy4_I LTR Gypsy 1213 1923 -4365 9 704 3428 28 4 47 chrUextra 15607971 15608422 -13396234 + CIRCE LINE Composite 4981 5412 -944 9 704 5969 40 1 4 chrUextra 15608522 15609234 -13395422 + R1_DM LINE R1 1027 1736 -3620 9 704 909 18 0 27 chrUextra 15609338 15609450 -13395206 + NTS_DM Other Other 25 133 -107 9 704 1332 18 0 6 chrUextra 15609450 15609615 -13395041 + NTS_DM Other Other 38 201 -39 9 704 928 9 0 27 chrUextra 15609667 15609779 -13394877 + NTS_DM Other Other 25 133 -107 9 704 1332 18 0 6 chrUextra 15609779 15609944 -13394712 + NTS_DM Other Other 38 201 -39 9 704 371 0 20 60 chrUextra 15609996 15610046 -13394610 + NTS_DM Other Other 25 72 -168 9 704 5238 33 69 11 chrUextra 15610958 15611670 -13392986 + STALKER4_I LTR Gypsy 3517 4269 -2261 9 704 246 150 0 0 chrUextra 15611856 15611896 -13392760 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 704 255 125 0 0 chrUextra 15611939 15611979 -13392677 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 704 22 56 0 0 chrUextra 15611992 15612028 -13392628 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 870 9 0 27 chrUextra 15612054 15612166 -13392490 + NTS_DM Other Other 25 133 -107 9 704 1252 18 0 6 chrUextra 15612166 15612331 -13392325 + NTS_DM Other Other 38 201 -39 9 704 731 11 0 40 chrUextra 15612383 15612482 -13392174 + NTS_DM Other Other 25 119 -121 9 704 1907 5 0 0 chrUextra 15612582 15612802 -13391854 + POGO DNA Pogo 484 703 -1418 9 704 433 0 0 0 chrUextra 15612800 15612850 -13391806 - Copia_I LTR Copia -4543 50 1 9 704 2249 4 4 0 chrUextra 15612850 15613125 -13391531 - Copia_LTR LTR Copia 0 276 1 9 704 487 109 33 0 chrUextra 15613202 15613294 -13391362 - PROTOP DNA P -861 3619 3525 9 704 1711 14 39 0 chrUextra 15613394 15613602 -13391054 - MICROPIA_I LTR Gypsy -4260 216 1 9 704 3639 11 0 83 chrUextra 15613602 15614106 -13390550 - MICROPIA_LTR LTR Gypsy 0 476 15 9 704 823 28 0 27 chrUextra 15614281 15614393 -13390263 + NTS_DM Other Other 25 133 -107 9 704 1057 79 0 12 chrUextra 15614393 15614559 -13390097 + NTS_DM Other Other 38 201 -39 9 704 870 9 0 27 chrUextra 15614611 15614723 -13389933 + NTS_DM Other Other 25 133 -107 9 704 1252 18 0 6 chrUextra 15614723 15614888 -13389768 + NTS_DM Other Other 38 201 -39 9 704 5808 15 13 0 chrUextra 15615018 15615730 -13388926 - STALKER4_I LTR Gypsy -3598 2932 2212 9 704 2645 180 62 27 chrUextra 15615830 15616542 -13388114 + SAR_DM Satellite Satellite 1 737 -208 9 704 5598 0 1 36 chrUextra 15616642 15617354 -13387302 + LSU-rRNA_Dme rRNA rRNA 166 852 -3048 9 704 6173 0 0 0 chrUextra 15617454 15618166 -13386490 + QUASIMODO_I LTR Gypsy 250 961 -5099 9 704 3115 166 12 9 chrUextra 15618266 15618952 -13385704 + SAR_DM Satellite Satellite 389 1076 -396 9 704 813 160 0 0 chrUextra 15619078 15619222 -13385434 + CT-rich Low_complexity Low_complexity 2 145 0 9 704 1324 199 50 9 chrUextra 15620704 15621023 -13383633 - HETA LINE telomeric -1730 4351 4020 9 704 22 56 0 0 chrUextra 15621176 15621212 -13383444 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 322 178 50 101 chrUextra 15621257 15621376 -13383280 + Copia_I LTR Copia 4401 4513 -80 9 704 2791 202 16 19 chrUextra 15621515 15622226 -13382430 + SAR_DM Satellite Satellite 1 709 -208 9 704 2743 174 31 27 chrUextra 15623138 15623850 -13380806 + SAR_DM Satellite Satellite 1 715 -354 9 704 5138 42 0 0 chrUextra 15624019 15624658 -13379998 - BATUMI_I LTR Pao -3642 4321 3683 9 704 254 300 15 15 chrUextra 15624800 15624932 -13379724 + (TATATG)n Simple_repeat Simple_repeat 2 133 0 9 704 22 0 0 0 chrUextra 15624958 15624980 -13379676 + AT_rich Low_complexity Low_complexity 1 22 0 9 704 718 299 16 48 chrUextra 15625070 15625379 -13379277 - TIRANT_I LTR Gypsy -6343 1349 1051 9 704 2955 179 8 11 chrUextra 15625574 15626282 -13378374 + SAR_DM Satellite Satellite 198 903 -569 9 704 1853 148 66 23 chrUextra 15626390 15626957 -13377699 - Stalker2_I LTR Gypsy -5577 953 291 9 704 28 48 0 0 chrUextra 15626964 15627006 -13377650 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 28 48 0 0 chrUextra 15627406 15627448 -13377208 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 488 119 36 0 chrUextra 15627721 15627805 -13376851 - NTS_DM Other Other -150 90 4 9 704 331 93 19 0 chrUextra 15628233 15628287 -13376369 - ROVER-I_DM LTR Gypsy -6529 55 1 9 704 1886 86 45 64 chrUextra 15628287 15628661 -13375995 - ROVER-LTR_DM LTR Gypsy 0 367 1 9 704 454 48 0 0 chrUextra 15628661 15628722 -13375934 - CIRCE LINE Composite -1983 4373 4313 9 704 5728 24 10 0 chrUextra 15628826 15629534 -13375122 - R1_DM LINE R1 -1709 3647 2933 9 704 5695 30 6 0 chrUextra 15629634 15630345 -13374311 + R1_DM LINE R1 2757 3471 -1885 9 704 2964 192 13 19 chrUextra 15630450 15631154 -13373502 - SAR_DM Satellite Satellite -620 700 1 9 704 3693 161 65 3 chrUextra 15631259 15631969 -13372687 - Gypsy5_I LTR Gypsy -2574 3935 3182 9 704 2832 187 8 6 chrUextra 15632070 15632731 -13371925 - SAR_DM Satellite Satellite -612 860 199 9 704 614 129 58 0 chrUextra 15632643 15632782 -13371874 + ARS406_DM Unknown Unknown 2 148 -205 9 704 2865 177 18 25 chrUextra 15632882 15633594 -13371062 - SAR_DM Satellite Satellite -321 1151 445 9 704 5941 18 0 0 chrUextra 15633694 15634406 -13370250 - R1_DM LINE R1 -2879 2477 1766 9 704 5918 22 0 0 chrUextra 15634506 15635218 -13369438 - R1_DM LINE R1 -2688 2668 1957 9 704 6079 3 0 0 chrUextra 15635318 15636030 -13368626 + FW_DM LINE Jockey 2776 3487 -1205 9 704 5971 3 3 1 chrUextra 15636130 15636842 -13367814 + ROO_I LTR Pao 4015 4727 -3529 9 704 6039 3 1 4 chrUextra 15636942 15637654 -13367002 + LSU-rRNA_Dme rRNA rRNA 689 1398 -2502 9 704 1280 24 0 6 chrUextra 15637757 15637927 -13366729 - NTS_DM Other Other -34 206 38 9 704 817 0 0 0 chrUextra 15637927 15638023 -13366633 - NTS_DM Other Other -107 133 38 9 704 832 9 9 27 chrUextra 15638023 15638134 -13366522 - NTS_DM Other Other -107 133 25 9 704 22 56 0 0 chrUextra 15638160 15638196 -13366460 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 255 125 0 0 chrUextra 15638209 15638249 -13366407 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15638292 15638332 -13366324 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 4568 0 2 2 chrUextra 15638566 15639092 -13365564 + LSU-rRNA_Dme rRNA rRNA 3375 3900 0 9 704 22 56 0 0 chrUextra 15639164 15639200 -13365456 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 246 150 0 0 chrUextra 15639205 15639245 -13365411 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 704 6111 0 0 0 chrUextra 15639378 15640090 -13364566 - LSU-rRNA_Dme rRNA rRNA -2702 1198 487 9 704 5749 16 0 4 chrUextra 15640190 15640901 -13363755 + STALKER4_I LTR Gypsy 4445 5152 -1378 9 704 6132 1 0 3 chrUextra 15641001 15641712 -13362944 - DOC LINE Jockey -808 3917 3209 9 704 5120 63 0 4 chrUextra 15641812 15642508 -13362148 + IDEFIX_I LTR Gypsy 2529 3221 -2407 9 704 2550 89 24 6 chrUextra 15642625 15643334 -13361322 - DMSAT6 Satellite Satellite -28 721 1 9 704 1833 185 24 22 chrUextra 15643434 15643887 -13360769 - Stalker2_I LTR Gypsy -6658 744 291 9 704 22 0 0 0 chrUextra 15643914 15643936 -13360720 + AT_rich Low_complexity Low_complexity 1 22 0 9 704 538 108 24 0 chrUextra 15644062 15644145 -13360511 - STALKER4_LTR LTR Gypsy -23 379 295 9 704 6117 1 0 1 chrUextra 15644245 15644956 -13359700 + BURDOCK_I LTR Gypsy 264 973 -4887 9 704 2411 83 34 21 chrUextra 15645867 15646578 -13358078 - DMSAT6 Satellite Satellite -36 720 1 9 704 2486 175 9 10 chrUextra 15646685 15647389 -13357267 - SAR_DM Satellite Satellite -396 703 1 9 704 273 203 0 0 chrUextra 15647679 15647738 -13356918 + FROGGER_I LTR Copia 172 230 -1847 9 704 5811 20 0 0 chrUextra 15648300 15649011 -13355645 + ROO_I LTR Pao 1557 2267 -5989 9 704 6098 0 1 3 chrUextra 15649111 15649819 -13354837 + SSU-rRNA_Dme rRNA rRNA 840 1546 -449 9 704 5002 82 3 1 chrUextra 15649922 15650632 -13354024 - S_DM DNA Tc1 -766 970 260 9 704 4414 59 70 12 chrUextra 15650760 15651444 -13353212 + QUASIMODO_I LTR Gypsy 4249 4972 -1088 9 704 2580 201 23 24 chrUextra 15651544 15652251 -13352405 + SAR_DM Satellite Satellite 1 706 -203 9 704 37 39 0 0 chrUextra 15652405 15652456 -13352200 + AT_rich Low_complexity Low_complexity 1 51 0 9 704 28 48 0 0 chrUextra 15652811 15652853 -13351803 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 2100 173 8 7 chrUextra 15653170 15653874 -13350782 + SAR_DM Satellite Satellite 1 705 -677 9 704 5642 21 28 10 chrUextra 15653977 15654688 -13349968 + FW_DM LINE Jockey 1987 2710 -1982 9 704 2330 65 6 6 chrUextra 15654788 15655113 -13349543 - R1_DM LINE R1 -5031 325 1 9 704 2240 22 153 0 chrUextra 15655146 15655499 -13349157 - R1_DM LINE R1 0 5356 4950 9 704 1982 4 0 0 chrUextra 15655599 15655826 -13348830 - LSU-rRNA_Dme rRNA rRNA -1034 2866 2640 9 704 4153 2 2 2 chrUextra 15655824 15656310 -13348346 - R1_DM LINE R1 0 5356 4871 9 704 2862 187 10 7 chrUextra 15656410 15657083 -13347573 - SAR_DM Satellite Satellite -603 869 195 9 704 799 107 0 0 chrUextra 15656990 15657121 -13347535 + ARS406_DM Unknown Unknown 1 131 -222 9 704 2763 186 14 28 chrUextra 15657223 15657829 -13346827 + SAR_DM Satellite Satellite 1 597 -208 9 704 660 62 0 0 chrUextra 15657836 15657932 -13346724 - ARS406_DM Unknown Unknown -195 158 63 9 704 34 24 0 0 chrUextra 15658169 15658210 -13346446 + AT_rich Low_complexity Low_complexity 1 41 0 9 704 21 95 0 0 chrUextra 15658423 15658486 -13346170 + AT_rich Low_complexity Low_complexity 1 63 0 9 704 1893 0 5 0 chrUextra 15658498 15658719 -13345937 + LSU-rRNA_Dme rRNA rRNA 1 222 -3678 9 704 6156 0 0 0 chrUextra 15658843 15659554 -13345102 + FW_DM LINE Jockey 350 1060 -3632 9 704 6033 10 0 0 chrUextra 15659654 15660365 -13344291 - R1_DM LINE R1 -211 5145 4435 9 704 3125 162 10 20 chrUextra 15660465 15661175 -13343481 - SAR_DM Satellite Satellite -519 953 251 9 704 5749 22 1 1 chrUextra 15661276 15661987 -13342669 + R1_DM LINE R1 3694 4404 -952 9 704 3416 2 2 2 chrUextra 15662096 15662498 -13342158 - STALKER4_LTR LTR Gypsy 0 402 1 9 704 2329 33 3 0 chrUextra 15662498 15662798 -13341858 - FW_DM LINE Jockey -1305 3387 3087 9 704 1148 0 14 0 chrUextra 15662898 15663036 -13341620 - SSU-rRNA_Dme rRNA rRNA -1855 140 1 9 704 32 0 0 0 chrUextra 15663168 15663200 -13341456 + AT_rich Low_complexity Low_complexity 1 32 0 9 704 28 48 0 0 chrUextra 15663528 15663570 -13341086 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 5917 13 0 1 chrUextra 15663709 15664417 -13340239 - Copia2_I LTR Copia -2334 1828 1122 9 704 2865 23 122 0 chrUextra 15664520 15664999 -13339657 + R1_DM LINE R1 4530 5066 -290 9 704 934 35 0 0 chrUextra 15664996 15665110 -13339546 + R1_DM LINE R1 5243 5356 0 9 704 610 68 11 0 chrUextra 15665143 15665231 -13339425 + R1_DM LINE R1 1 89 -5267 9 704 2901 68 98 6 chrUextra 15665333 15665821 -13338835 + Gypsy12_I LTR Gypsy 5009 5541 -5 9 704 955 182 10 29 chrUextra 15665838 15666042 -13338614 + Gypsy12_LTR LTR Gypsy 13 212 -2124 9 704 776 0 0 0 chrUextra 15666142 15666230 -13338426 - MDG1_I LTR Gypsy -6508 88 1 9 704 2946 20 0 0 chrUextra 15666230 15666586 -13338070 - MDG1_LTR LTR Gypsy 0 442 87 9 704 423 100 0 0 chrUextra 15666586 15666656 -13338000 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9 704 1194 51 17 33 chrUextra 15666672 15666853 -13337803 + PROTOP DNA P 406 583 -3897 9 704 6107 7 0 0 chrUextra 15666953 15667664 -13336992 - DMRT1B LINE R1 -4471 712 2 9 704 6091 0 0 0 chrUextra 15667764 15668475 -13336181 - MDG3_I LTR Gypsy -737 4249 3539 9 704 3973 158 10 3 chrUextra 15668575 15669286 -13335370 - Gypsy5_I LTR Gypsy -2351 4158 3443 9 704 1266 87 0 0 chrUextra 15669386 15669594 -13335062 - MDG1_I LTR Gypsy -5255 1341 1134 9 704 2613 93 16 2 chrUextra 15669666 15670097 -13334559 - MDG1_I LTR Gypsy -5458 1138 702 9 704 1388 224 86 39 chrUextra 15670197 15670900 -13333756 + SAR_DM Satellite Satellite 1 736 -208 9 704 2944 36 0 10 chrUextra 15671012 15671404 -13333252 - TRANSIB2 DNA Transib -2447 397 10 9 704 1695 154 93 0 chrUextra 15671407 15671719 -13332937 + DMRT1B LINE R1 3968 4308 -875 9 704 630 12 12 0 chrUextra 15671821 15671904 -13332752 + Copia_I LTR Copia 2934 3017 -1576 9 704 1113 96 22 71 chrUextra 15671904 15672129 -13332527 + BATUMI_LTR LTR Pao 1 214 -58 9 704 1245 75 0 6 chrUextra 15672123 15672296 -13332360 + BATUMI_I LTR Pao 83 254 -7709 9 704 1951 13 0 0 chrUextra 15672294 15672530 -13332126 - DOC2_DM LINE Jockey -1 4792 4557 9 704 2997 185 8 10 chrUextra 15672630 15673338 -13331318 + SAR_DM Satellite Satellite 252 958 -514 9 704 2282 183 92 60 chrUextra 15673455 15674152 -13330504 + Gypsy12_LTR LTR Gypsy 1478 2196 -140 9 704 5442 2 3 0 chrUextra 15674252 15674877 -13329779 + LSU-rRNA_Dme rRNA rRNA 2028 2654 -1246 9 704 764 0 0 0 chrUextra 15674876 15674963 -13329693 + R1_DM LINE R1 3231 3317 -2039 9 704 944 9 9 0 chrUextra 15675874 15675988 -13328668 - NTS_DM Other Other -125 115 1 9 704 1734 21 17 17 chrUextra 15675988 15676228 -13328428 - NTS_DM Other Other 0 240 1 9 704 1408 20 20 20 chrUextra 15676228 15676431 -13328225 - NTS_DM Other Other 0 240 38 9 704 817 0 0 0 chrUextra 15676431 15676527 -13328129 - NTS_DM Other Other -107 133 38 9 704 400 17 17 0 chrUextra 15676527 15676585 -13328071 - NTS_DM Other Other -107 133 75 9 704 5937 13 1 0 chrUextra 15676685 15677396 -13327260 - S_DM DNA Tc1 -258 1478 767 9 704 870 9 0 27 chrUextra 15677512 15677624 -13327032 + NTS_DM Other Other 25 133 -107 9 704 1252 18 0 6 chrUextra 15677624 15677789 -13326867 + NTS_DM Other Other 38 201 -39 9 704 21 57 0 0 chrUextra 15677789 15677824 -13326832 + AT_rich Low_complexity Low_complexity 1 35 0 9 704 806 19 9 27 chrUextra 15677850 15677961 -13326695 + NTS_DM Other Other 25 133 -107 9 704 1438 15 20 20 chrUextra 15677961 15678164 -13326492 + NTS_DM Other Other 38 240 0 9 704 358 23 0 0 chrUextra 15678164 15678207 -13326449 + NTS_DM Other Other 1 43 -197 9 704 4810 90 4 3 chrUextra 15678307 15679018 -13325638 - S_DM DNA Tc1 -349 1387 676 9 704 5887 13 1 3 chrUextra 15679118 15679829 -13324827 - R1_DM LINE R1 -1061 4295 3586 9 704 2987 173 11 14 chrUextra 15679929 15680627 -13324029 + SAR_DM Satellite Satellite 208 903 -569 9 704 740 49 0 10 chrUextra 15680537 15680640 -13324016 - ARS406_DM Unknown Unknown -164 189 88 9 704 5623 18 13 0 chrUextra 15680740 15681451 -13323205 - PROTOP_A DNA P -278 827 108 9 704 2400 195 33 10 chrUextra 15681551 15682262 -13322394 + SAR_DM Satellite Satellite 1 727 -396 9 704 3474 178 0 26 chrUextra 15683182 15683884 -13320772 - HETA LINE telomeric -2479 3602 2919 9 704 2975 0 0 0 chrUextra 15683984 15684344 -13320312 - ROO_I LTR Pao -3163 5093 4734 9 704 2958 0 3 3 chrUextra 15684329 15684695 -13319961 - ROO_I LTR Pao -6127 2129 1764 9 704 2295 92 30 34 chrUextra 15684795 15685505 -13319151 + DMSAT6 Satellite Satellite 1 707 -256 9 704 2141 114 45 40 chrUextra 15685607 15686083 -13318573 + Gypsy12_I LTR Gypsy 427 976 -4570 9 704 407 273 0 0 chrUextra 15686090 15686212 -13318444 + DM297_I LTR Gypsy 3337 3458 -2709 9 704 459 172 10 48 chrUextra 15686212 15686316 -13318340 + Gypsy12_LTR LTR Gypsy 1 100 -2236 9 704 6245 0 1 0 chrUextra 15686417 15687128 -13317528 - R2_DM LINE R2 -1139 2468 1757 9 704 1406 29 6 0 chrUextra 15687228 15687401 -13317255 + NINJA_I LTR Pao 1502 1675 -4336 9 704 4383 26 0 0 chrUextra 15687397 15687939 -13316717 + NINJA_I LTR Pao 1863 2404 -3607 9 704 246 150 0 0 chrUextra 15688105 15688145 -13316511 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15688197 15688237 -13316419 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15688289 15688329 -13316327 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 22 56 0 0 chrUextra 15688334 15688370 -13316286 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 2686 0 0 0 chrUextra 15688442 15688750 -13315906 - LSU-rRNA_Dme rRNA rRNA 0 3900 3593 9 704 4514 25 0 2 chrUextra 15688850 15689410 -13315246 + MAX_I LTR Pao 6818 7376 -538 9 704 895 18 0 0 chrUextra 15689447 15689561 -13315095 + MAX_I LTR Pao 7381 7494 -420 9 704 5185 21 49 17 chrUextra 15689661 15690372 -13314284 - ROO_I LTR Pao -4252 4004 3271 9 704 372 333 24 33 chrUextra 15690482 15690878 -13313778 - Gypsy3_I LTR Gypsy -5228 1784 1218 9 704 5834 25 1 1 chrUextra 15691283 15691994 -13312662 - MDG3_I LTR Gypsy -3757 1229 519 9 704 1736 38 8 29 chrUextra 15692113 15692359 -13312297 + BATUMI_LTR LTR Pao 32 272 0 9 704 2397 113 18 12 chrUextra 15692934 15693616 -13311040 + DMSAT6 Satellite Satellite 1 686 0 9 704 6178 1 0 0 chrUextra 15693718 15694427 -13310229 - ROO_I LTR Pao -644 7612 6904 9 704 2201 105 25 13 chrUextra 15694527 15695238 -13309418 + DMSAT6 Satellite Satellite 1 720 -46 9 704 5998 0 3 1 chrUextra 15695338 15696049 -13308607 + ROO_I LTR Pao 6657 7368 -888 9 704 2338 36 3 0 chrUextra 15696169 15696472 -13308184 + QUASIMODO_I LTR Gypsy 1824 2127 -3933 9 704 2615 49 122 0 chrUextra 15696475 15696860 -13307796 + QUASIMODO_I LTR Gypsy 2284 2715 -3345 9 704 1612 19 14 5 chrUextra 15697773 15697986 -13306670 - NTS_DM Other Other -25 215 1 9 704 1847 4 17 13 chrUextra 15697986 15698225 -13306431 - NTS_DM Other Other 0 240 1 9 704 1811 13 17 13 chrUextra 15698225 15698464 -13306192 - NTS_DM Other Other 0 240 1 9 704 5274 0 2 0 chrUextra 15698692 15699293 -13305363 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 9 704 3053 177 11 10 chrUextra 15699396 15700104 -13304552 + SAR_DM Satellite Satellite 229 937 -535 9 704 464 0 0 0 chrUextra 15700204 15700257 -13304399 - NTS_DM Other Other -150 90 38 9 704 870 9 0 27 chrUextra 15700257 15700369 -13304287 - NTS_DM Other Other -107 133 25 9 704 22 56 0 0 chrUextra 15700395 15700431 -13304225 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 255 125 0 0 chrUextra 15700444 15700484 -13304172 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700527 15700567 -13304089 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700619 15700659 -13303997 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700711 15700751 -13303905 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700803 15700843 -13303813 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 29 28 0 0 chrUextra 15700848 15700884 -13303772 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 413 7 93 43 chrUextra 15701032 15701172 -13303484 + (TC)n Simple_repeat Simple_repeat 2 148 0 9 704 291 232 0 0 chrUextra 15702025 15702094 -13302562 - BS2 LINE Jockey -507 4214 4146 9 704 309 0 0 0 chrUextra 15702248 15702287 -13302369 - DIVER2_I LTR Pao -366 3781 3743 9 704 1526 29 0 99 chrUextra 15702285 15702518 -13302138 - DIVER2_I LTR Pao -2572 1575 1366 9 704 690 0 0 0 chrUextra 15702637 15702717 -13301939 - Gypsy6_LTR LTR Gypsy -327 80 1 9 704 5336 13 2 0 chrUextra 15702719 15703348 -13301308 - Gypsy6_I LTR Gypsy 0 7012 6383 9 704 245 125 46 15 chrUextra 15703705 15703770 -13300886 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 704 22 35 0 0 chrUextra 15703964 15703993 -13300663 + AT_rich Low_complexity Low_complexity 1 29 0 9 704 28 48 0 0 chrUextra 15704411 15704453 -13300203 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 32 0 0 0 chrUextra 15704782 15704814 -13299842 + AT_rich Low_complexity Low_complexity 1 32 0 9 704 34 24 0 0 chrUextra 15705145 15705186 -13299470 + AT_rich Low_complexity Low_complexity 1 41 0 9 704 5866 22 0 1 chrUextra 15705881 15706592 -13298064 + R1_DM LINE R1 1937 2646 -2710 9 704 3037 176 11 10 chrUextra 15706692 15707396 -13297260 + SAR_DM Satellite Satellite 254 958 -514 9 704 23 50 0 48 chrUextra 15707739 15707802 -13296854 + AT_rich Low_complexity Low_complexity 1 60 0 9 704 456 125 0 48 chrUextra 15707886 15707970 -13296686 + Baggins1 LINE LOA 5036 5115 -338 9 704 508 83 36 0 chrUextra 15707935 15708019 -13296637 - FB4_DM DNA Tc1 -3676 413 327 9 704 1520 52 0 0 chrUextra 15708022 15708214 -13296442 + Jockey2 LINE Jockey 2530 2721 -707 9 704 6047 11 0 0 chrUextra 15708314 15709025 -13295631 + Invader3_I LTR Gypsy 3596 4306 -582 9 704 2960 174 13 25 chrUextra 15709125 15709831 -13294825 + SAR_DM Satellite Satellite 422 1118 -354 9 704 27 29 0 0 chrUextra 15710197 15710231 -13294425 + AT_rich Low_complexity Low_complexity 1 34 0 9 704 1194 23 175 0 chrUextra 15710470 15710647 -13294009 + Baggins1 LINE LOA 4727 4934 -519 9 704 5344 30 56 3 chrUextra 15710747 15711458 -13293198 - NINJA_I LTR Pao -551 5460 4712 9 704 46 0 0 0 chrUextra 15711895 15711941 -13292715 + AT_rich Low_complexity Low_complexity 1 46 0 9 704 428 83 0 0 chrUextra 15712369 15712441 -13292215 + NTS_DM Other Other 66 137 -103 9 704 425 127 53 38 chrUextra 15712449 15712580 -13292076 + NTS_DM Other Other 108 240 0 9 704 277 106 21 0 chrUextra 15712580 15712627 -13292029 + NTS_DM Other Other 1 48 -192 9 704 987 144 20 5 chrUextra 15712718 15712920 -13291736 + NTS_DM Other Other 1 205 -35 9 704 273 125 21 0 chrUextra 15712951 15712999 -13291657 + NTS_DM Other Other 1 49 -191 9 704 5981 11 1 0 chrUextra 15713180 15713891 -13290765 - Gypsy4_I LTR Gypsy -4672 1616 905 9 704 262 191 43 43 chrUextra 15714005 15714120 -13290536 + A-rich Low_complexity Low_complexity 3 117 0 9 704 1537 288 5 6 chrUextra 15714156 15714702 -13289954 + ROVER-I_DM LTR Gypsy 514 1396 -5188 9 704 6126 3 0 3 chrUextra 15714803 15715513 -13289143 + R2_DM LINE R2 2764 3471 -136 9 704 5970 10 1 0 chrUextra 15715613 15716320 -13288336 - R1_DM LINE R1 -4568 788 81 9 704 2380 126 86 3 chrUextra 15716424 15717135 -13287521 + BATUMI_I LTR Pao 4140 4988 -2975 9 704 6134 6 0 0 chrUextra 15717235 15717946 -13286710 + R1_DM LINE R1 1889 2599 -2757 9 704 6178 0 0 1 chrUextra 15718046 15718757 -13285899 - DOC LINE Jockey -788 3937 3228 9 704 51 31 0 0 chrUextra 15719032 15719097 -13285559 + AT_rich Low_complexity Low_complexity 1 65 0 9 704 22 35 0 0 chrUextra 15719273 15719302 -13285354 + AT_rich Low_complexity Low_complexity 1 29 0 9 704 23 0 0 0 chrUextra 15719692 15719715 -13284941 + AT_rich Low_complexity Low_complexity 1 23 0 9 704 475 132 0 0 chrUextra 15720482 15720558 -13284098 - NTS_DM Other Other -164 76 1 9 704 280 104 21 0 chrUextra 15720648 15720696 -13283960 - NTS_DM Other Other -191 49 1 9 704 1062 150 29 21 chrUextra 15720696 15720934 -13283722 - NTS_DM Other Other 0 240 1 9 704 270 125 21 0 chrUextra 15721018 15721066 -13283590 - NTS_DM Other Other -191 49 1 9 704 2517 206 14 21 chrUextra 15721290 15721995 -13282661 + SAR_DM Satellite Satellite 465 1164 -308 9 704 468 132 36 0 chrUextra 15722101 15722184 -13282472 - NTS_DM Other Other -151 89 4 9 704 1355 6 0 18 chrUextra 15722294 15722459 -13282197 - NTS_DM Other Other -78 162 1 9 704 1926 4 17 13 chrUextra 15722459 15722698 -13281958 - NTS_DM Other Other 0 240 1 9 704 794 0 35 26 chrUextra 15722698 15722812 -13281844 - NTS_DM Other Other 0 240 126 9 704 6057 14 0 4 chrUextra 15722912 15723623 -13281033 - IDEFIX_I LTR Gypsy -2337 3291 2584 9 704 21 0 0 0 chrUextra 15724176 15724197 -13280459 + AT_rich Low_complexity Low_complexity 1 21 0 9 704 6347 4 0 1 chrUextra 15724534 15725245 -13279411 + STALKER4_I LTR Gypsy 3482 4191 -2339 9 704 6053 28 1 0 chrUextra 15725345 15726056 -13278600 - MAX_I LTR Pao -2386 5528 4817 9 704 6239 24 0 1 chrUextra 15726156 15726867 -13277789 - MAX_I LTR Pao -913 7001 6292 9 704 946 178 102 15 chrUextra 15727416 15727621 -13277035 + DMLTR5 LTR Gypsy 44 266 0 9 704 366 35 69 17 chrUextra 15727620 15727678 -13276978 + HMSBEAGLE_I LTR Gypsy 1 61 -6468 9 704 741 111 0 0 chrUextra 15727778 15727895 -13276761 - ARS406_DM Unknown Unknown -236 117 1 9 704 3178 174 12 10 chrUextra 15727802 15728486 -13276170 + SAR_DM Satellite Satellite 195 879 -593 9 10 4911 66 1 5 chrUextra 15728592 15729300 -13275356 + G_DM LINE Jockey 815 1515 -527 9 705 1449 0 0 0 chrUextra 15729400 15729561 -13275095 + (GAGAA)n Simple_repeat Simple_repeat 4 164 0 9 705 3059 173 15 8 chrUextra 15730211 15730922 -13273734 - SAR_DM Satellite Satellite -685 715 1 9 705 599 55 0 0 chrUextra 15731022 15731095 -13273561 + R1_DM LINE R1 1318 1390 -3966 9 705 5230 31 22 0 chrUextra 15731096 15731733 -13272923 - FW_DM LINE Jockey -4 4688 4038 9 705 6103 18 4 1 chrUextra 15731833 15732542 -13272114 - R1_DM LINE R1 -817 4539 3829 9 705 1538 22 0 0 chrUextra 15732644 15732823 -13271833 - SSU-rRNA_Dme rRNA rRNA -1816 179 1 9 705 31 0 0 0 chrUextra 15732956 15732987 -13271669 + AT_rich Low_complexity Low_complexity 1 31 0 9 705 27 49 0 0 chrUextra 15733314 15733355 -13271301 + AT_rich Low_complexity Low_complexity 1 41 0 9 705 6324 4 0 1 chrUextra 15733455 15734166 -13270490 + DM176_I LTR Gypsy 2700 3409 -3011 9 705 6064 30 0 1 chrUextra 15734268 15734977 -13269679 + MAX_I LTR Pao 4189 4896 -3018 9 705 903 0 10 0 chrUextra 15736699 15736802 -13267854 + SSU-rRNA_Dme rRNA rRNA 1892 1995 0 9 705 4107 10 41 2 chrUextra 15737510 15738003 -13266653 + IDEFIX_LTR LTR Gypsy 83 594 0 9 705 25 0 0 0 chrUextra 15738193 15738218 -13266438 + AT_rich Low_complexity Low_complexity 1 25 0 9 705 390 159 53 38 chrUextra 15738357 15738488 -13266168 + NTS_DM Other Other 108 240 0 9 705 324 83 21 0 chrUextra 15738488 15738536 -13266120 + NTS_DM Other Other 1 49 -191 9 705 909 109 0 0 chrUextra 15738626 15738763 -13265893 + NTS_DM Other Other 1 137 -103 9 705 390 159 53 38 chrUextra 15738771 15738902 -13265754 + NTS_DM Other Other 108 240 0 9 705 310 104 21 0 chrUextra 15738902 15738950 -13265706 + NTS_DM Other Other 1 49 -191 9 705 5982 17 0 0 chrUextra 15739943 15740654 -13264002 + MDG1_I LTR Gypsy 4886 5596 -1000 9 705 6441 3 1 0 chrUextra 15740754 15741465 -13263191 + LSU-rRNA_Dme rRNA rRNA 2113 2824 -1076 9 705 4494 17 0 0 chrUextra 15741565 15742085 -13262571 + PROTOP DNA P 3961 4480 0 9 705 440 135 292 0 chrUextra 15742085 15742169 -13262487 - Gypsy12_I LTR Gypsy -972 4574 4465 9 705 783 109 9 0 chrUextra 15742166 15742276 -13262380 - Gypsy12_I LTR Gypsy -3725 1821 1711 9 705 6183 20 1 0 chrUextra 15742376 15743087 -13261569 - R1_DM LINE R1 -3023 2333 1622 9 705 354 261 84 74 chrUextra 15743187 15743390 -13261266 + GTWIN_LTR LTR Gypsy 201 405 -90 9 705 26 88 0 0 chrUextra 15743668 15743736 -13260920 + AT_rich Low_complexity Low_complexity 1 68 0 9 705 22 0 0 0 chrUextra 15743778 15743800 -13260856 + AT_rich Low_complexity Low_complexity 1 22 0 9 705 5901 1 0 35 chrUextra 15743998 15744709 -13259947 - LSU-rRNA_Dme rRNA rRNA -3088 812 127 9 705 5988 0 1 1 chrUextra 15744809 15745520 -13259136 + TRANSPAC_I LTR Gypsy 3212 3922 -668 9 705 5200 48 65 13 chrUextra 15745620 15746331 -13258325 - BATUMI_I LTR Pao -4345 3618 2871 9 705 6235 1 3 0 chrUextra 15746431 15747142 -13257514 + ROO_I LTR Pao 3785 4497 -3759 9 705 3202 16 3 0 chrUextra 15747242 15747610 -13257046 - STALKER4_LTR LTR Gypsy -33 369 1 9 705 2522 18 9 12 chrUextra 15747610 15747953 -13256703 - STALKER4_I LTR Gypsy 0 6530 6189 9 705 3216 172 11 13 chrUextra 15748053 15748748 -13255908 - SAR_DM Satellite Satellite -587 885 192 9 705 684 108 9 0 chrUextra 15748653 15748764 -13255892 + ARS406_DM Unknown Unknown 1 112 -241 9 705 6299 8 0 1 chrUextra 15748864 15749575 -13255081 - DMRT1B LINE R1 -317 4866 4157 9 705 3087 194 25 19 chrUextra 15749675 15750386 -13254270 - SAR_DM Satellite Satellite -613 715 1 9 705 6233 1 0 0 chrUextra 15750486 15751197 -13253459 - STALKER4_I LTR Gypsy -4547 1983 1273 9 705 715 179 14 14 chrUextra 15751475 15751622 -13253034 - HETRP_DM Satellite Satellite -197 1675 1529 9 705 703 186 14 14 chrUextra 15751755 15751902 -13252754 - HETRP_DM Satellite Satellite -197 1675 1529 9 705 5931 34 8 0 chrUextra 15752108 15752819 -13251837 + R1_DM LINE R1 2239 2955 -2401 9 705 46 45 0 0 chrUextra 15753323 15753390 -13251266 + AT_rich Low_complexity Low_complexity 1 67 0 9 705 260 105 0 0 chrUextra 15753403 15753441 -13251215 - Invader5_LTR LTR Gypsy 0 352 315 9 705 1525 37 5 0 chrUextra 15753440 15753630 -13251026 + DMCR1A LINE CR1 1189 1379 -3091 9 705 6063 28 0 1 chrUextra 15753730 15754441 -13250215 + R1_DM LINE R1 4205 4914 -442 9 705 28 48 0 0 chrUextra 15754636 15754678 -13249978 + AT_rich Low_complexity Low_complexity 1 42 0 9 705 32 0 0 0 chrUextra 15755006 15755038 -13249618 + AT_rich Low_complexity Low_complexity 1 32 0 9 705 656 13 0 13 chrUextra 15755172 15755251 -13249405 + SSU-rRNA_Dme rRNA rRNA 2 79 -1916 9 705 752 118 0 8 chrUextra 15755352 15755480 -13249176 - ARS406_DM Unknown Unknown -226 127 1 9 705 3151 176 7 7 chrUextra 15755389 15756063 -13248593 + SAR_DM Satellite Satellite 197 870 -602 9 705 2980 223 7 7 chrUextra 15756164 15756873 -13247783 + Stalker2_I LTR Gypsy 5255 5963 -1439 9 705 6163 27 0 0 chrUextra 15756974 15757685 -13246971 + R1_DM LINE R1 3946 4656 -700 9 705 1427 17 0 6 chrUextra 15758321 15758496 -13246160 + (TTCTC)n Simple_repeat Simple_repeat 2 175 0 9 705 6367 4 0 0 chrUextra 15758596 15759307 -13245349 + DMRT1B LINE R1 4248 4958 -225 9 705 6195 0 0 0 chrUextra 15760225 15760929 -13243727 + DM412 LTR Gypsy 2970 3673 -3224 9 705 3825 63 42 23 chrUextra 15761074 15761740 -13242916 - PROTOP_A DNA P 0 1153 529 9 705 3542 158 10 9 chrUextra 15761845 15762537 -13242119 - SAR_DM Satellite Satellite -411 1061 369 9 705 861 0 0 0 chrUextra 15762651 15762750 -13241906 - Invader2_I LTR Gypsy -3874 718 620 9 705 4814 0 30 0 chrUextra 15762750 15763292 -13241364 + ACCORD_LTR LTR Gypsy 1 558 0 9 705 645 0 0 0 chrUextra 15763292 15763362 -13241294 + ACCORD_I LTR Gypsy 1 70 -6218 9 705 21 57 0 0 chrUextra 15763629 15763664 -13240992 + AT_rich Low_complexity Low_complexity 1 35 0 9 705 2067 8 0 0 chrUextra 15763664 15763904 -13240752 + ALUII_DM Unknown Unknown 1 240 0 9 705 4633 35 0 0 chrUextra 15764273 15764818 -13239838 - R1_DM LINE R1 -3495 1861 1317 9 705 1493 18 0 0 chrUextra 15764816 15764984 -13239672 - R1_DM LINE R1 -3528 1828 1661 9 705 5911 37 13 3 chrUextra 15765084 15765795 -13238861 - R1_DM LINE R1 -3306 2050 1333 9 705 4474 0 2 0 chrUextra 15765895 15766425 -13238231 + ROO_I LTR Pao 7726 8256 0 9 705 1631 0 0 0 chrUextra 15766425 15766606 -13238050 + ROO_LTR LTR Pao 1 181 -247 9 705 6378 0 4 3 chrUextra 15766706 15767417 -13237239 - SSU-rRNA_Dme rRNA rRNA -167 1828 1117 9 705 3572 255 17 28 chrUextra 15768328 15769846 -13234810 + SAR_DM Satellite Satellite 1 1501 -353 9 705 2090 127 49 148 chrUextra 15769950 15770661 -13233995 - BATUMI_I LTR Pao -6859 1104 464 9 705 1134 0 0 0 chrUextra 15770761 15770887 -13233769 + (CACAA)n Simple_repeat Simple_repeat 2 127 0 9 705 3390 0 0 0 chrUextra 15771103 15771472 -13233184 + DMRT1B LINE R1 1 369 -4814 9 705 968 142 68 6 chrUextra 15771572 15771749 -13232907 - HETA LINE telomeric -213 5868 5681 9 705 416 127 90 9 chrUextra 15771724 15771835 -13232821 - TART LINE telomeric -4831 9646 9527 9 705 58 15 0 0 chrUextra 15772037 15772102 -13232554 + AT_rich Low_complexity Low_complexity 1 65 0 9 705 1572 246 53 48 chrUextra 15772393 15773073 -13231583 + SAR_DM Satellite Satellite 1 683 -243 9 705 287 216 61 53 chrUextra 15772957 15773089 -13231567 - XDMR Unknown Unknown 0 361 229 9 705 6079 10 4 0 chrUextra 15773194 15773905 -13230751 + PROTOP DNA P 3020 3733 -747 9 705 3089 174 14 27 chrUextra 15774006 15774710 -13229946 + SAR_DM Satellite Satellite 424 1118 -354 9 705 3432 172 60 14 chrUextra 15774816 15775524 -13229132 - SAR_DM Satellite Satellite -426 740 1 9 705 593 92 35 0 chrUextra 15775918 15776005 -13228651 - NTS_DM Other Other -150 90 1 9 705 1527 29 23 19 chrUextra 15776005 15776219 -13228437 - NTS_DM Other Other 0 240 26 9 705 263 0 0 0 chrUextra 15776438 15776469 -13228187 + NTS_DM Other Other 171 201 -39 9 705 1560 19 18 32 chrUextra 15776521 15776740 -13227916 + NTS_DM Other Other 25 240 0 9 705 959 9 0 0 chrUextra 15776740 15776847 -13227809 + NTS_DM Other Other 1 107 -133 9 705 4290 47 39 8 chrUextra 15777249 15777960 -13226696 + PROTOP DNA P 146 753 -3727 9 705 184 22 87 22 chrUextra 15778725 15778771 -13225885 + (GA)n Simple_repeat Simple_repeat 1 49 0 9 705 2083 197 35 7 chrUextra 15778871 15779301 -13225355 - HETA LINE telomeric -1620 4461 4020 9 705 22 56 0 0 chrUextra 15779451 15779487 -13225169 + AT_rich Low_complexity Low_complexity 1 36 0 9 705 5399 12 0 2 chrUextra 15779682 15780279 -13224377 + DOC2_DM LINE Jockey 3217 3812 -981 9 705 978 9 0 0 chrUextra 15780280 15780391 -13224265 + DOC2_DM LINE Jockey 3939 4049 -744 9 705 327 26 0 0 chrUextra 15781164 15781202 -13223454 + DNAREP1_DM LINE Penelope 2 39 -555 9 705 6141 21 4 0 chrUextra 15781302 15782012 -13222644 + R1_DM LINE R1 2610 3322 -2034 9 705 3473 3 5 3 chrUextra 15782112 15782500 -13222156 + LSU-rRNA_Dme rRNA rRNA 1403 1791 -2109 9 705 2584 4 4 0 chrUextra 15782541 15782822 -13221834 + LSU-rRNA_Dme rRNA rRNA 1788 2069 -1831 9 705 2229 0 0 0 chrUextra 15782922 15783160 -13221496 - LSU-rRNA_Dme rRNA rRNA -1875 2025 1788 9 705 3783 5 5 7 chrUextra 15783201 15783632 -13221024 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1362 9 705 6230 8 0 1 chrUextra 15783732 15784442 -13220214 + DM297_I LTR Gypsy 4438 5146 -1021 9 705 269 0 31 0 chrUextra 15784542 15784574 -13220082 - NTS_DM Other Other -207 33 1 9 705 1992 4 17 13 chrUextra 15784574 15784813 -13219843 - NTS_DM Other Other 0 240 1 9 705 1988 4 17 13 chrUextra 15784813 15785052 -13219604 - NTS_DM Other Other 0 240 1 9 705 1576 5 20 20 chrUextra 15785052 15785252 -13219404 - NTS_DM Other Other 0 240 41 9 705 1908 0 18 13 chrUextra 15785352 15785581 -13219075 + NTS_DM Other Other 11 240 0 9 705 1974 8 17 13 chrUextra 15785581 15785820 -13218836 + NTS_DM Other Other 1 240 0 9 705 1975 8 17 13 chrUextra 15785820 15786059 -13218597 + NTS_DM Other Other 1 240 0 9 705 6454 1 1 0 chrUextra 15786162 15786872 -13217784 + R1_DM LINE R1 1428 2138 -3218 9 705 579 46 35 0 chrUextra 15789215 15789302 -13215354 + (GAGAA)n Simple_repeat Simple_repeat 4 93 0 9 705 6547 1 0 3 chrUextra 15789402 15790112 -13214544 + LSU-rRNA_Dme rRNA rRNA 1825 2532 -1368 9 705 2476 256 30 18 chrUextra 15790212 15790921 -13213735 - TOM_I LTR Gypsy -834 5278 4562 9 705 2274 144 8 0 chrUextra 15791022 15791389 -13213267 + HMSBEAGLE_I LTR Gypsy 2085 2454 -4075 9 705 1792 191 21 9 chrUextra 15791393 15791731 -13212925 + HMSBEAGLE_I LTR Gypsy 2422 2763 -3766 9 705 5476 28 69 6 chrUextra 15792642 15793352 -13211304 - R1_DM LINE R1 -919 4437 3683 9 705 3405 173 14 11 chrUextra 15793452 15794161 -13210495 + SAR_DM Satellite Satellite 298 1008 -464 9 705 2758 206 20 20 chrUextra 15794282 15794972 -13209684 - SAR_DM Satellite Satellite -354 1118 429 9 705 3232 29 3 3 chrUextra 15795072 15795455 -13209201 + IDEFIX_LTR LTR Gypsy 195 577 -17 9 705 2805 28 0 3 chrUextra 15795453 15795782 -13208874 + IDEFIX_I LTR Gypsy 1837 2164 -3464 9 705 6254 14 3 1 chrUextra 15795882 15796592 -13208064 + QUASIMODO_I LTR Gypsy 2429 3139 -2921 9 705 2519 87 18 28 chrUextra 15796693 15797402 -13207254 - DMSAT6 Satellite Satellite -23 701 1 9 705 6193 19 0 11 chrUextra 15797502 15798212 -13206444 - FW_DM LINE Jockey -2230 2462 1761 9 705 3126 181 16 10 chrUextra 15798315 15799002 -13205654 - SAR_DM Satellite Satellite -615 857 167 9 705 909 101 0 7 chrUextra 15798882 15799022 -13205634 + ARS406_DM Unknown Unknown 1 139 -214 9 705 6164 28 0 1 chrUextra 15799122 15799831 -13204825 + R1_DM LINE R1 1397 2104 -3252 9 705 2481 0 4 0 chrUextra 15799932 15800200 -13204456 - LSU-rRNA_Dme rRNA rRNA -1844 2056 1788 9 705 3489 5 5 8 chrUextra 15800241 15800642 -13204014 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1392 9 705 3870 16 2 5 chrUextra 15800744 15801186 -13203470 + DIVER2_I LTR Pao 2632 3072 -1075 9 705 2033 88 0 0 chrUextra 15801180 15801452 -13203204 - ACCORD2_I LTR Gypsy -3218 3994 3723 9 705 6543 3 1 0 chrUextra 15801552 15802262 -13202394 + DOC LINE Jockey 3145 3855 -870 9 705 6391 7 0 1 chrUextra 15802365 15803072 -13201584 + R1_DM LINE R1 3905 4610 -746 9 705 6364 22 0 0 chrUextra 15803982 15804692 -13199964 + DIVER_I LTR Pao 1892 2601 -3042 9 705 4206 2 4 0 chrUextra 15804792 15805244 -13199412 - SSU-rRNA_Dme rRNA rRNA -1541 454 1 9 705 32 0 0 0 chrUextra 15805376 15805408 -13199248 + AT_rich Low_complexity Low_complexity 1 32 0 9 705 6022 34 1 4 chrUextra 15805602 15806312 -13198344 - MAX_I LTR Pao -4675 3239 2532 9 705 3031 176 14 21 chrUextra 15806412 15807122 -13197534 - SAR_DM Satellite Satellite -649 705 1 9 705 3126 170 7 34 chrUextra 15807222 15807922 -13196734 + SAR_DM Satellite Satellite 438 1118 -354 9 705 363 156 42 62 chrUextra 15807836 15807932 -13196724 - XDMR_DM Unknown Unknown 0 360 267 9 705 5966 23 8 14 chrUextra 15808032 15808742 -13195914 + BATUMI_I LTR Pao 974 1679 -6284 9 705 32 0 0 0 chrUextra 15809155 15809187 -13195469 + AT_rich Low_complexity Low_complexity 1 32 0 9 705 2163 4 0 0 chrUextra 15809319 15809552 -13195104 + SSU-rRNA_Dme rRNA rRNA 1 233 -1762 9 705 960 323 13 15 chrUextra 15809653 15810046 -13194610 - HMSBEAGLE_I LTR Gypsy -4698 1831 1440 9 705 6286 3 1 1 chrUextra 15810462 15811172 -13193484 + R1_DM LINE R1 630 1339 -4017 9 705 6457 0 1 0 chrUextra 15811272 15811982 -13192674 - ROO_I LTR Pao -4911 3345 2635 9 705 4427 63 0 2 chrUextra 15812082 15812658 -13191998 - BATUMI_I LTR Pao -86 7877 7303 9 705 912 45 0 0 chrUextra 15812681 15812792 -13191864 + BATUMI_I LTR Pao 6427 6537 -1426 9 705 4472 2 0 0 chrUextra 15812892 15813373 -13191283 + NOMAD_I LTR Gypsy 6092 6572 0 9 705 1039 52 34 6 chrUextra 15813373 15813602 -13191054 + NOMAD_LTR LTR Gypsy 1 266 -252 9 705 4455 25 0 0 chrUextra 15813702 15814214 -13190442 - R1_DM LINE R1 -1719 3637 3126 9 705 1773 0 0 0 chrUextra 15814214 15814412 -13190244 + ACCORD_LTR LTR Gypsy 1 198 -360 9 705 3386 183 8 8 chrUextra 15814512 15815222 -13189434 + SAR_DM Satellite Satellite 293 1002 -470 9 705 224 185 31 0 chrUextra 15815591 15815656 -13189000 + (TTA)n Simple_repeat Simple_repeat 2 68 0 9 705 22 35 0 0 chrUextra 15815943 15815972 -13188684 + AT_rich Low_complexity Low_complexity 1 29 0 9 705 1784 209 73 14 chrUextra 15816133 15816840 -13187816 - SAR_DM Satellite Satellite -796 748 1 9 705 2002 5 0 0 chrUextra 15816942 15817164 -13187492 - DMRT1A LINE R1 -3597 1586 1365 9 705 3319 99 17 11 chrUextra 15817184 15817652 -13187004 + Gypsy12_I LTR Gypsy 835 1305 -4241 9 705 5482 40 22 3 chrUextra 15817752 15818462 -13186194 - R1_DM LINE R1 -4163 1193 470 9 705 2345 0 0 4 chrUextra 15818562 15818818 -13185838 + LSU-rRNA_Dme rRNA rRNA 3646 3900 0 9 705 268 196 0 19 chrUextra 15818919 15818971 -13185685 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 268 196 0 19 chrUextra 15819011 15819063 -13185593 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 268 196 0 19 chrUextra 15819103 15819155 -13185501 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 278 176 0 19 chrUextra 15819186 15819238 -13185418 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 268 196 0 19 chrUextra 15820251 15820303 -13184353 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 705 4662 0 19 2 chrUextra 15820364 15820892 -13183764 + G_DM LINE Jockey 1 537 -3809 9 705 396 107 0 0 chrUextra 15820992 15821048 -13183608 - Gypsy12_I LTR Gypsy -3988 1558 1503 9 705 4641 90 1 20 chrUextra 15821055 15821702 -13182954 - Gypsy12_I LTR Gypsy -3992 1554 920 9 705 3568 0 0 0 chrUextra 15822612 15822991 -13181665 - ROO_LTR LTR Pao -49 379 1 9 705 742 177 12 18 chrUextra 15822992 15823322 -13181334 + SAR_DM Satellite Satellite 1 328 -1045 9 705 6391 3 0 0 chrUextra 15823422 15824132 -13180524 + ROO_I LTR Pao 4683 5392 -2864 9 705 2654 208 23 28 chrUextra 15824232 15824940 -13179716 + SAR_DM Satellite Satellite 478 1181 -291 9 705 3487 27 84 0 chrUextra 15825042 15825752 -13178904 + R1_DM LINE R1 4438 5207 -149 9 705 3116 35 18 28 chrUextra 15825852 15826560 -13178096 + Gypsy12_I LTR Gypsy 208 966 -4580 9 705 594 14 14 0 chrUextra 15826662 15826733 -13177923 + ACCORD2_LTR LTR Gypsy 143 214 -1 9 705 5437 30 2 0 chrUextra 15826734 15827372 -13177284 + R1_DM LINE R1 2422 3060 -2296 9 705 3323 112 39 94 chrUextra 15827472 15828182 -13176474 + PROTOP_B DNA P 372 1042 -111 9 705 6562 1 1 1 chrUextra 15828282 15828992 -13175664 - SSU-rRNA_Dme rRNA rRNA -728 1267 558 9 705 3272 182 12 7 chrUextra 15829920 15830612 -13174044 - SAR_DM Satellite Satellite -396 1076 382 9 705 307 0 77 58 chrUextra 15830715 15830767 -13173889 + NTS_DM Other Other 188 240 0 9 705 1401 6 0 18 chrUextra 15830767 15830932 -13173724 + NTS_DM Other Other 1 162 -78 9 705 534 119 36 0 chrUextra 15831042 15831126 -13173530 + NTS_DM Other Other 4 90 -150 9 705 404 183 11 11 chrUextra 15831522 15831616 -13173040 + XDMR_DM Unknown Unknown 267 360 0 9 705 3306 171 26 20 chrUextra 15831532 15832232 -13172424 - SAR_DM Satellite Satellite -354 1118 415 9 705 6045 6 0 0 chrUextra 15832334 15833042 -13171614 - QUASIMODO_I LTR Gypsy -366 5694 4987 9 705 3120 187 9 9 chrUextra 15833149 15833850 -13170806 - SAR_DM Satellite Satellite -535 937 237 9 705 1411 10 112 15 chrUextra 15833952 15834148 -13170508 + TAHRE LINE telomeric 952 1166 -9297 9 705 3797 26 120 6 chrUextra 15834163 15834662 -13169994 + DOC2_DM LINE Jockey 7 562 -4231 9 705 1176 42 115 77 chrUextra 15834762 15834971 -13169685 + PROTOP_B DNA P 720 936 -217 9 705 293 50 0 0 chrUextra 15834964 15835024 -13169632 + PROTOP_B DNA P 572 631 -522 9 705 2392 58 13 0 chrUextra 15835029 15835342 -13169314 + PROTOP_B DNA P 794 1110 -43 9 705 605 137 206 0 chrUextra 15835339 15835470 -13169186 - DMCR1A LINE CR1 -1125 3345 3188 9 705 518 124 45 0 chrUextra 15835572 15835661 -13168995 - DM176_I LTR Gypsy -3687 2733 2641 9 705 896 86 56 21 chrUextra 15835668 15835811 -13168845 - DM176_I LTR Gypsy -3913 2507 2360 9 705 372 88 0 0 chrUextra 15835839 15835896 -13168760 + (TAA)n Simple_repeat Simple_repeat 3 59 0 9 705 1990 91 74 3 chrUextra 15835898 15836197 -13168459 + MDG1_LTR LTR Gypsy 94 413 -29 9 705 5965 30 6 0 chrUextra 15836382 15837092 -13167564 + R1_DM LINE R1 2822 3535 -1821 9 705 5906 24 1 4 chrUextra 15837192 15837902 -13166754 - G_DM LINE Jockey -1466 2880 2173 9 705 6017 1 0 1 chrUextra 15838002 15838711 -13165945 + ACCORD_I LTR Gypsy 5251 5958 -330 9 705 3198 132 29 68 chrUextra 15838817 15839521 -13165135 - Gypsy8_I LTR Gypsy -2816 1531 1035 9 705 693 12 0 0 chrUextra 15839622 15839704 -13164952 + R1_DM LINE R1 4985 5066 -290 9 705 941 53 0 0 chrUextra 15839701 15839815 -13164841 + R1_DM LINE R1 5243 5356 0 9 705 3718 66 8 4 chrUextra 15839848 15840332 -13164324 + R1_DM LINE R1 1 486 -4870 9 705 22 35 0 0 chrUextra 15840467 15840496 -13164160 + AT_rich Low_complexity Low_complexity 1 29 0 9 705 37 39 0 0 chrUextra 15840597 15840648 -13164008 + AT_rich Low_complexity Low_complexity 1 51 0 9 705 28 48 0 0 chrUextra 15841003 15841045 -13163611 + AT_rich Low_complexity Low_complexity 1 42 0 9 705 6334 4 0 0 chrUextra 15841242 15841952 -13162704 + Copia2_I LTR Copia 116 825 -3337 9 705 28 48 0 0 chrUextra 15842139 15842181 -13162475 + AT_rich Low_complexity Low_complexity 1 42 0 9 705 37 39 0 0 chrUextra 15842536 15842587 -13162069 + AT_rich Low_complexity Low_complexity 1 51 0 9 705 22 35 0 0 chrUextra 15842688 15842717 -13161939 + AT_rich Low_complexity Low_complexity 1 29 0 9 705 6171 16 1 0 chrUextra 15842862 15843572 -13161084 + DMRT1B LINE R1 3744 4454 -729 9 705 1137 8 0 0 chrUextra 15843672 15843803 -13160853 - FW_DM LINE Jockey -3705 987 857 9 705 4636 0 0 0 chrUextra 15843803 15844309 -13160347 + TABOR_LTR LTR Gypsy 1 506 0 9 705 622 0 0 0 chrUextra 15844309 15844382 -13160274 + TABOR_I LTR Gypsy 1 73 -6263 9 705 4009 10 1 9 chrUextra 15844484 15845192 -13159464 - DOC LINE Jockey -1711 3014 2233 9 705 5838 10 16 4 chrUextra 15845292 15846002 -13158654 + MDG1_I LTR Gypsy 888 1605 -4991 9 705 3181 188 10 8 chrUextra 15846102 15846812 -13157844 + SAR_DM Satellite Satellite 296 1006 -466 9 705 3614 164 1 21 chrUextra 15846954 15847621 -13157035 - ROVER-I_DM LTR Gypsy -1276 5308 4655 9 705 5322 59 17 1 chrUextra 15847722 15848432 -13156224 - IDEFIX_I LTR Gypsy -4864 764 44 9 705 6351 0 0 1 chrUextra 15848532 15849242 -13155414 + LSU-rRNA_Dme rRNA rRNA 566 1274 -2626 9 705 851 0 0 0 chrUextra 15849354 15849450 -13155206 + NTS_DM Other Other 38 133 -107 9 705 1442 20 20 25 chrUextra 15849450 15849654 -13155002 + NTS_DM Other Other 38 240 0 9 705 1813 21 17 17 chrUextra 15849654 15849894 -13154762 + NTS_DM Other Other 1 240 0 9 705 1296 19 0 0 chrUextra 15849894 15850048 -13154608 + NTS_DM Other Other 1 154 -86 9 705 3327 54 98 78 chrUextra 15850152 15850754 -13153902 + ROO_I LTR Pao 281 894 -7362 9 705 953 34 0 0 chrUextra 15850743 15850862 -13153794 + ROO_I LTR Pao 1303 1421 -6835 9 705 4500 32 0 5 chrUextra 15851110 15851672 -13152984 - CIRCE LINE Composite -1376 4980 4422 9 705 3328 176 7 16 chrUextra 15851772 15852482 -13152174 - SAR_DM Satellite Satellite -464 1008 305 9 705 5757 37 7 4 chrUextra 15852582 15853292 -13151364 + MDG1_I LTR Gypsy 1551 2262 -4334 9 705 703 114 0 9 chrUextra 15853392 15853507 -13151149 - ARS406_DM Unknown Unknown -239 114 1 9 705 3276 176 6 7 chrUextra 15853413 15854099 -13150557 + SAR_DM Satellite Satellite 195 879 -593 9 705 3126 196 7 8 chrUextra 15854202 15854912 -13149744 - SAR_DM Satellite Satellite -515 957 249 9 705 6022 11 23 0 chrUextra 15855012 15855720 -13148936 - QUASIMODO_I LTR Gypsy -3706 2354 1631 9 705 6257 16 1 0 chrUextra 15855822 15856532 -13148124 - MDG3_I LTR Gypsy -3393 1593 883 9 705 5258 2 0 3 chrUextra 15856632 15857213 -13147443 - SSU-rRNA_Dme rRNA rRNA -1416 579 1 9 705 3118 0 0 0 chrUextra 15857442 15857783 -13146873 + LSU-rRNA_Dme rRNA rRNA 3560 3900 0 9 705 29 28 0 0 chrUextra 15857855 15857891 -13146765 + AT_rich Low_complexity Low_complexity 1 36 0 9 705 262 150 0 0 chrUextra 15857896 15857936 -13146720 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 705 262 150 0 0 chrUextra 15857988 15858028 -13146628 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 705 262 150 0 0 chrUextra 15858080 15858120 -13146536 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 705 6269 11 0 0 chrUextra 15858252 15858962 -13145694 + Invader6_I LTR Gypsy 3203 3912 -187 9 88 6515 0 0 0 chrUextra 15859064 15859772 -13144884 + MAX_I LTR Pao 6035 6742 -1172 9 706 1868 170 41 14 chrUextra 15859872 15859899 -13144757 + SAR_DM Satellite Satellite 1 37 -1106 9 706 1391 65 0 0 chrUextra 15859899 15860085 -13144571 - ARS406_DM Unknown Unknown -167 186 1 9 706 1868 170 41 14 chrUextra 15860085 15860580 -13144076 + SAR_DM Satellite Satellite 38 727 -416 9 706 1121 7 0 0 chrUextra 15860682 15860822 -13143834 + DOC2_DM LINE Jockey 4654 4793 0 9 706 1939 86 32 17 chrUextra 15860934 15861392 -13143264 + DOC2_DM LINE Jockey 6 565 -4228 9 706 4525 0 0 0 chrUextra 15861492 15861994 -13142662 + Copia_I LTR Copia 4092 4593 0 9 706 1769 0 39 0 chrUextra 15861994 15862201 -13142455 + Copia_LTR LTR Copia 1 215 -61 9 706 5003 44 68 13 chrUextra 15862302 15863012 -13141644 - QUASIMODO_I LTR Gypsy -961 5099 4351 9 706 4869 105 28 1 chrUextra 15863112 15863819 -13140837 + Gypsy12_I LTR Gypsy 3331 4056 -1490 9 706 23 0 0 0 chrUextra 15864350 15864373 -13140283 + AT_rich Low_complexity Low_complexity 1 23 0 9 706 996 26 0 0 chrUextra 15864517 15864632 -13140024 + DIVER2_I LTR Pao 1366 1480 -2667 9 706 764 102 0 0 chrUextra 15864732 15864850 -13139806 - ARS406_DM Unknown Unknown -235 118 1 9 706 3113 183 7 9 chrUextra 15864754 15865442 -13139214 + SAR_DM Satellite Satellite 192 878 -594 9 706 1621 11 0 0 chrUextra 15865542 15865731 -13138925 + DM176_LTR LTR Gypsy 319 507 0 9 706 4222 6 0 4 chrUextra 15865731 15866250 -13138406 + DM176_I LTR Gypsy 1 517 -5903 9 706 6285 4 8 0 chrUextra 15866352 15867062 -13137594 - DMRT1B LINE R1 -4324 859 144 9 706 5967 25 17 1 chrUextra 15867162 15867872 -13136784 + R1_DM LINE R1 4187 4907 -449 9 706 364 159 0 80 chrUextra 15868782 15868857 -13135799 - HETRP_DM Satellite Satellite -286 1586 1518 9 706 688 193 14 14 chrUextra 15868970 15869117 -13135539 - HETRP_DM Satellite Satellite -197 1675 1529 9 706 659 199 12 49 chrUextra 15869245 15869409 -13135247 - HETRP_DM Satellite Satellite -197 1675 1518 9 706 2358 199 68 31 chrUextra 15869592 15870297 -13134359 + SAR_DM Satellite Satellite 516 1246 -226 9 706 3860 26 117 7 chrUextra 15870420 15871112 -13133544 + PROTOP DNA P 1 797 -308 9 706 6329 4 18 0 chrUextra 15871212 15871922 -13132734 - Gypsy4_I LTR Gypsy -3605 2683 1961 9 706 6377 0 1 3 chrUextra 15872024 15872732 -13131924 + SSU-rRNA_Dme rRNA rRNA 810 1516 -479 9 706 546 244 23 35 chrUextra 15872840 15873014 -13131642 - Gypsy_LTR LTR Gypsy -278 204 33 9 706 590 230 0 0 chrUextra 15873016 15873142 -13131514 - Gypsy_I LTR Gypsy -288 6219 6094 9 706 278 211 40 50 chrUextra 15873158 15873258 -13131398 - TIRANT_LTR LTR Gypsy -94 323 225 9 706 2025 54 4 40 chrUextra 15873270 15873542 -13131114 - Gypsy4_LTR LTR Gypsy 0 287 26 9 706 6061 27 0 0 chrUextra 15873642 15874351 -13130305 + STALKER4_I LTR Gypsy 3454 4162 -2368 9 706 792 37 0 115 chrUextra 15874845 15874967 -13129689 - Baggins1 LINE LOA 0 5453 5346 9 706 6206 11 0 0 chrUextra 15875264 15875972 -13128684 + FW_DM LINE Jockey 2287 2994 -1698 9 706 6251 14 1 0 chrUextra 15876072 15876782 -13127874 + Gypsy4_I LTR Gypsy 2550 3260 -3028 9 706 3159 172 22 11 chrUextra 15876888 15877592 -13127064 - SAR_DM Satellite Satellite -693 711 1 9 706 3015 23 0 0 chrUextra 15877692 15878034 -13126622 + R1_DM LINE R1 5015 5356 0 9 706 2535 63 6 6 chrUextra 15878067 15878402 -13126254 + R1_DM LINE R1 1 335 -5021 9 706 4567 63 68 41 chrUextra 15878502 15879163 -13125493 + CIRCE LINE Composite 292 970 -5386 9 706 291 125 21 0 chrUextra 15879323 15879371 -13125285 + NTS_DM Other Other 1 49 -191 9 706 1062 150 30 17 chrUextra 15879469 15879699 -13124957 + NTS_DM Other Other 8 240 0 9 706 225 183 45 68 chrUextra 15879750 15879838 -13124818 + NTS_DM Other Other 155 240 0 9 706 1034 131 5 5 chrUextra 15879838 15880022 -13124634 + NTS_DM Other Other 1 184 -56 9 706 6512 1 0 0 chrUextra 15880932 15881642 -13123014 + SSU-rRNA_Dme rRNA rRNA 268 977 -1018 9 706 3045 6 0 0 chrUextra 15881742 15882077 -13122579 - LSU-rRNA_Dme rRNA rRNA -988 2912 2578 9 706 3429 0 0 3 chrUextra 15882073 15882452 -13122204 - R2_DM LINE R2 -9 3598 3221 9 706 6073 24 0 1 chrUextra 15882552 15883261 -13121395 - FW_DM LINE Jockey -227 4465 3758 9 706 6178 8 0 1 chrUextra 15883362 15884072 -13120584 + QUASIMODO_I LTR Gypsy 2407 3115 -2945 9 706 3170 170 23 21 chrUextra 15884177 15884882 -13119774 - SAR_DM Satellite Satellite -382 1090 385 9 706 6493 1 0 0 chrUextra 15884982 15885692 -13118964 - SSU-rRNA_Dme rRNA rRNA -966 1029 320 9 706 5694 2 0 0 chrUextra 15885792 15886417 -13118239 + LSU-rRNA_Dme rRNA rRNA 1957 2581 -1319 9 706 682 0 24 0 chrUextra 15886415 15886499 -13118157 + R2_DM LINE R2 3 88 -3519 9 706 5873 40 1 1 chrUextra 15887412 15888122 -13116534 - R1_DM LINE R1 -3667 1689 980 9 706 2264 0 0 0 chrUextra 15888222 15888473 -13116183 + R2_DM LINE R2 3357 3607 0 9 706 455 36 0 0 chrUextra 15888469 15888524 -13116132 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 9 706 3519 0 5 0 chrUextra 15888524 15888932 -13115724 + R1_DM LINE R1 1 410 -4946 9 706 369 21 0 0 chrUextra 15889032 15889080 -13115576 + ARS406_DM Unknown Unknown 111 158 -195 9 706 1874 174 2 7 chrUextra 15889087 15889497 -13115159 - SAR_DM Satellite Satellite -569 903 496 9 706 1102 152 4 9 chrUextra 15889512 15889737 -13114919 - SAR_DM Satellite Satellite -569 903 680 9 706 5958 1 1 0 chrUextra 15889842 15890552 -13114104 + ROO_I LTR Pao 3099 3809 -4447 9 706 6026 10 3 1 chrUextra 15892272 15892982 -13111674 + Copia2_I LTR Copia 1715 2425 -1737 9 706 5889 17 16 0 chrUextra 15893082 15893792 -13110864 - R1_DM LINE R1 -3037 2319 1599 9 706 26 30 0 0 chrUextra 15893987 15894020 -13110636 + AT_rich Low_complexity Low_complexity 1 33 0 9 706 1836 39 4 0 chrUextra 15894370 15894602 -13110054 - PROTOP DNA P 0 4480 4248 9 706 2415 4 0 0 chrUextra 15895512 15895790 -13108866 - DM176_I LTR Gypsy -6142 278 1 9 706 3619 7 0 2 chrUextra 15895790 15896222 -13108434 - DM176_LTR LTR Gypsy 0 507 77 9 706 2692 62 5 19 chrUextra 15896653 15897032 -13107624 - Baggins1 LINE LOA -262 5191 4818 9 706 3710 63 42 23 chrUextra 15897132 15897793 -13106863 + PROTOP_A DNA P 534 1153 0 9 706 2463 106 10 16 chrUextra 15897942 15898652 -13106004 - DMSAT6 Satellite Satellite -102 705 1 9 706 3459 17 0 0 chrUextra 15898752 15899168 -13105488 + G2_DM LINE Jockey 578 993 -2109 9 706 2460 20 0 0 chrUextra 15899168 15899462 -13105194 + PROTOP_A DNA P 1 294 -811 9 706 795 84 0 0 chrUextra 15899562 15899681 -13104975 - ARS406_DM Unknown Unknown -233 120 2 9 706 2922 177 9 10 chrUextra 15899586 15900272 -13104384 + SAR_DM Satellite Satellite 192 876 -596 9 706 335 96 356 0 chrUextra 15900372 15900445 -13104211 - Gypsy12_I LTR Gypsy -983 4563 4465 9 706 3435 104 34 97 chrUextra 15900442 15901082 -13103574 - Gypsy12_I LTR Gypsy -3725 1821 1222 9 706 2712 179 20 24 chrUextra 15901187 15901892 -13102764 - SAR_DM Satellite Satellite -313 1159 458 9 706 597 332 10 9 chrUextra 15902314 15902679 -13101977 - GTWIN_I LTR Gypsy -2883 3538 3117 9 706 4392 15 0 0 chrUextra 15902802 15903322 -13101334 + R1_DM LINE R1 4837 5356 0 9 706 1241 20 0 0 chrUextra 15903320 15903468 -13101188 + LSU-rRNA_Dme rRNA rRNA 2640 2787 -1113 9 706 307 0 0 0 chrUextra 15903477 15903512 -13101144 + R2_DM LINE R2 374 408 -3199 9 706 5950 3 3 0 chrUextra 15903612 15904322 -13100334 - ROO_I LTR Pao -4005 4251 3540 9 706 1146 15 0 0 chrUextra 15904611 15904746 -13099910 - 5S_DM RNA RNA 0 135 1 9 706 1167 7 0 0 chrUextra 15904994 15905129 -13099527 - 5S_DM RNA RNA 0 135 1 9 706 28 48 0 0 chrUextra 15905340 15905382 -13099274 + AT_rich Low_complexity Low_complexity 1 42 0 9 706 32 0 0 0 chrUextra 15905710 15905742 -13098914 + AT_rich Low_complexity Low_complexity 1 32 0 9 706 596 0 0 0 chrUextra 15905874 15905942 -13098714 + SSU-rRNA_Dme rRNA rRNA 1 68 -1927 9 706 5760 11 0 0 chrUextra 15906042 15906752 -13097904 + Invader2_I LTR Gypsy 1619 2328 -2264 9 706 2795 167 47 19 chrUextra 15906852 15907555 -13097101 - SAR_DM Satellite Satellite -504 968 246 9 706 256 128 0 0 chrUextra 15907515 15907562 -13097094 + ARS406_DM Unknown Unknown 1 47 -306 9 706 1326 13 0 0 chrUextra 15907662 15907814 -13096842 + (GAGAA)n Simple_repeat Simple_repeat 4 155 0 9 706 735 0 0 0 chrUextra 15908471 15908557 -13096099 - NTS_DM Other Other -117 123 38 9 706 870 9 0 27 chrUextra 15908557 15908669 -13095987 - NTS_DM Other Other -107 133 25 9 706 1252 18 0 6 chrUextra 15908721 15908886 -13095770 - NTS_DM Other Other -39 201 38 9 706 843 18 0 27 chrUextra 15908886 15908998 -13095658 - NTS_DM Other Other -107 133 25 9 706 877 23 8 8 chrUextra 15909050 15909180 -13095476 - NTS_DM Other Other -39 201 72 9 706 219 114 0 0 chrUextra 15909753 15909788 -13094868 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 706 6040 8 1 0 chrUextra 15910089 15910798 -13093858 + DMRT1B LINE R1 1464 2173 -3010 9 706 1804 76 4 0 chrUextra 15910898 15911161 -13093495 + HETA LINE telomeric 5818 6081 0 9 706 2536 71 8 19 chrUextra 15911154 15911607 -13093049 + HETA LINE telomeric 1 631 -5450 9 706 3078 65 30 2 chrUextra 15911707 15912139 -13092517 - R1_DM LINE R1 -3978 1378 935 9 706 2193 61 0 0 chrUextra 15912121 15912416 -13092240 - R1_DM LINE R1 -4740 616 322 9 706 2671 187 16 27 chrUextra 15913325 15914034 -13090622 + SAR_DM Satellite Satellite 457 1157 -315 9 706 262 106 0 21 chrUextra 15914213 15914261 -13090395 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 706 351 49 65 16 chrUextra 15914283 15914345 -13090311 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 706 874 178 102 15 chrUextra 15914344 15914549 -13090107 - DMLTR5 LTR Gypsy 0 266 44 9 706 1757 0 14 5 chrUextra 15914943 15915163 -13089493 + LSU-rRNA_Dme rRNA rRNA 1567 1788 -2112 9 706 3887 2 0 0 chrUextra 15915207 15915652 -13089004 + LSU-rRNA_Dme rRNA rRNA 1788 2232 -1668 9 706 3410 18 7 41 chrUextra 15915776 15916239 -13088417 - CIRCE LINE Composite -929 5427 4981 9 706 2389 204 37 13 chrUextra 15916561 15917264 -13087392 - SAR_DM Satellite Satellite -1033 719 1 9 706 5918 3 0 0 chrUextra 15917370 15918079 -13086577 - STALKER4_I LTR Gypsy -2921 3609 2901 9 706 268 152 0 0 chrUextra 15918179 15918225 -13086431 - ARS406_DM Unknown Unknown -185 168 123 9 706 2726 175 30 14 chrUextra 15918221 15918888 -13085768 + SAR_DM Satellite Satellite 201 878 -594 9 706 970 16 0 23 chrUextra 15918988 15919119 -13085537 - BLASTOPIA_LTR LTR Gypsy -147 128 1 9 706 4958 2 2 3 chrUextra 15919119 15919697 -13084959 + LSU-rRNA_Dme rRNA rRNA 911 1487 -2413 9 706 5825 21 3 0 chrUextra 15919798 15920506 -13084150 + R1_DM LINE R1 2799 3508 -1848 9 706 2578 34 6 0 chrUextra 15920606 15920934 -13083722 - DM1731_LTR LTR Copia -6 330 1 9 706 1587 5 0 0 chrUextra 15920947 15921163 -13083493 + (TATAA)n Simple_repeat Simple_repeat 1 216 0 9 706 1150 53 0 0 chrUextra 15921163 15921315 -13083341 - DM1731_LTR LTR Copia -1 335 184 9 706 1059 61 40 0 chrUextra 15921416 15921563 -13083093 + DMCR1A LINE CR1 3458 3610 -860 9 706 4358 36 0 2 chrUextra 15921563 15922124 -13082532 - PROTOP_A DNA P 0 1105 546 9 706 5992 1 1 1 chrUextra 15923033 15923742 -13080914 + MDG3_I LTR Gypsy 3608 4316 -670 9 706 6035 1 1 0 chrUextra 15923842 15924548 -13080108 + R1_DM LINE R1 2897 3603 -1753 9 706 3060 182 4 6 chrUextra 15924661 15925342 -13079314 - SAR_DM Satellite Satellite -569 903 224 9 706 406 162 0 0 chrUextra 15925280 15925360 -13079296 + ARS406_DM Unknown Unknown 1 80 -273 9 706 3046 172 10 16 chrUextra 15925460 15926169 -13078487 + SAR_DM Satellite Satellite 267 971 -501 9 706 5845 7 0 0 chrUextra 15926269 15926978 -13077678 + STALKER4_I LTR Gypsy 2781 3489 -3041 9 706 3173 170 10 7 chrUextra 15927897 15928596 -13076060 - SAR_DM Satellite Satellite -396 1076 376 9 706 4216 0 0 0 chrUextra 15928696 15929223 -13075433 + Invader2_I LTR Gypsy 4063 4589 -3 9 706 1576 0 0 0 chrUextra 15929226 15929405 -13075251 + Invader2_LTR LTR Gypsy 1 179 -87 9 706 5469 47 1 1 chrUextra 15929505 15930214 -13074442 - R1_DM LINE R1 -3887 1469 761 9 706 3403 26 3 4 chrUextra 15930349 15931023 -13073633 - PROTOP_A DNA P 0 1105 385 9 706 607 30 38 38 chrUextra 15931125 15931230 -13073426 + NTS_DM Other Other 136 240 0 9 706 1756 17 17 17 chrUextra 15931230 15931470 -13073186 + NTS_DM Other Other 1 240 0 9 706 1734 21 17 17 chrUextra 15931470 15931710 -13072946 + NTS_DM Other Other 1 240 0 9 706 1009 8 8 0 chrUextra 15931710 15931832 -13072824 + NTS_DM Other Other 1 123 -117 9 706 6160 1 0 1 chrUextra 15931932 15932641 -13072015 + LSU-rRNA_Dme rRNA rRNA 2388 3095 -805 9 706 675 134 20 34 chrUextra 15932741 15932888 -13071768 + HETA LINE telomeric 3043 3187 -2894 9 706 2235 87 17 12 chrUextra 15933081 15933450 -13071206 + HETA LINE telomeric 5079 5430 -651 9 706 1152 21 0 0 chrUextra 15933550 15933693 -13070963 + QUASIMODO_LTR LTR Gypsy 516 658 0 9 706 4681 9 0 16 chrUextra 15933693 15934259 -13070397 + QUASIMODO_I LTR Gypsy 1 557 -5503 9 706 6205 1 1 0 chrUextra 15934359 15935068 -13069588 + LSU-rRNA_Dme rRNA rRNA 3132 3841 -59 9 706 954 33 0 0 chrUextra 15935978 15936098 -13068558 - Copia2_LTR_DM LTR Copia -38 160 41 9 706 3611 87 55 5 chrUextra 15936106 15936686 -13067970 + IDEFIX_I LTR Gypsy 3820 4428 -1200 9 706 6033 8 0 0 chrUextra 15937597 15938304 -13066352 - R1_DM LINE R1 -239 5117 4411 9 706 21 89 0 0 chrUextra 15938965 15939021 -13065635 + AT_rich Low_complexity Low_complexity 1 56 0 9 706 23 68 0 0 chrUextra 15939059 15939103 -13065553 + AT_rich Low_complexity Low_complexity 1 44 0 9 706 5757 30 3 0 chrUextra 15939213 15939922 -13064734 + R1_DM LINE R1 1455 2165 -3191 9 706 4827 26 0 0 chrUextra 15940022 15940604 -13064052 - CIRCE LINE Composite -347 6009 5428 9 706 6104 4 0 0 chrUextra 15940831 15941540 -13063116 - R1_DM LINE R1 -2879 2477 1769 9 706 6018 0 1 0 chrUextra 15941640 15942346 -13062310 + DMRT1B LINE R1 2348 3054 -2129 9 706 5906 0 1 0 chrUextra 15942449 15943158 -13061498 + ROO_I LTR Pao 698 1407 -6849 9 706 2360 98 25 31 chrUextra 15943258 15943940 -13060716 + DMSAT6 Satellite Satellite 1 678 -245 9 706 2908 179 8 21 chrUextra 15944067 15944776 -13059880 + SAR_DM Satellite Satellite 414 1113 -359 9 706 6131 3 0 3 chrUextra 15944876 15945585 -13059071 + SSU-rRNA_Dme rRNA rRNA 141 847 -1148 9 706 6040 0 0 0 chrUextra 15945685 15946394 -13058262 - ROO_I LTR Pao -1121 7135 6427 9 706 985 33 0 0 chrUextra 15947303 15947423 -13057233 + R1_DM LINE R1 5237 5356 0 9 706 4095 65 23 3 chrUextra 15947444 15948012 -13056644 + R1_DM LINE R1 23 601 -4755 9 706 5302 43 15 0 chrUextra 15948142 15948821 -13055835 + DOC3_DM LINE Jockey 1647 2335 -2405 9 706 943 0 0 0 chrUextra 15948921 15949028 -13055628 + LSU-rRNA_Dme rRNA rRNA 3794 3900 0 9 706 29 28 0 0 chrUextra 15949100 15949136 -13055520 + AT_rich Low_complexity Low_complexity 1 36 0 9 706 246 150 0 0 chrUextra 15949141 15949181 -13055475 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 246 150 0 0 chrUextra 15949233 15949273 -13055383 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 246 150 0 0 chrUextra 15949325 15949365 -13055291 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 255 125 0 0 chrUextra 15949408 15949448 -13055208 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 22 56 0 0 chrUextra 15949461 15949497 -13055159 + AT_rich Low_complexity Low_complexity 1 36 0 9 706 809 19 0 28 chrUextra 15949523 15949630 -13055026 + NTS_DM Other Other 25 128 -112 9 706 5704 8 0 0 chrUextra 15949730 15950439 -13054217 + QUASIMODO_I LTR Gypsy 3369 4077 -1983 9 706 283 0 0 0 chrUextra 15950539 15950573 -13054083 + TAHRE LINE telomeric 10419 10452 -11 9 706 825 119 55 97 chrUextra 15950572 15950861 -13053795 + HETA LINE telomeric 190 466 -5615 9 706 2001 139 19 8 chrUextra 15950852 15951248 -13053408 + HETA LINE telomeric 349 1025 -5056 9 706 2261 110 7 74 chrUextra 15951348 15952042 -13052614 + DMSAT6 Satellite Satellite 1 647 -82 9 706 1590 14 18 18 chrUextra 15952157 15952378 -13052278 + NTS_DM Other Other 20 240 0 9 706 1731 21 17 17 chrUextra 15952378 15952618 -13052038 + NTS_DM Other Other 1 240 0 9 706 1756 17 17 17 chrUextra 15952618 15952858 -13051798 + NTS_DM Other Other 1 240 0 9 706 3178 171 9 9 chrUextra 15956202 15956900 -13047756 + SAR_DM Satellite Satellite 379 1076 -396 9 706 5945 10 8 0 chrUextra 15957011 15957720 -13046936 - Copia2_I LTR Copia -2709 1453 739 9 706 511 0 51 39 chrUextra 15957820 15957898 -13046758 + NTS_DM Other Other 162 240 0 9 706 1850 4 17 13 chrUextra 15957898 15958137 -13046519 + NTS_DM Other Other 1 240 0 9 706 1847 4 17 13 chrUextra 15958137 15958376 -13046280 + NTS_DM Other Other 1 240 0 9 706 1243 7 7 0 chrUextra 15958376 15958529 -13046127 + NTS_DM Other Other 1 154 -86 9 706 2954 181 13 7 chrUextra 15958631 15959327 -13045329 - SAR_DM Satellite Satellite -549 923 224 9 706 426 113 0 0 chrUextra 15959265 15959336 -13045320 + ARS406_DM Unknown Unknown 1 71 -282 9 706 6074 6 0 0 chrUextra 15959438 15960147 -13044509 - R1_DM LINE R1 -2640 2716 2008 9 706 587 234 38 30 chrUextra 15960248 15960513 -13044143 + XDMR_DM Unknown Unknown 84 350 -10 9 706 928 277 37 33 chrUextra 15960376 15960947 -13043709 - SAR_DM Satellite Satellite -640 832 260 9 706 5837 28 0 0 chrUextra 15961865 15962574 -13042082 + R1_DM LINE R1 1276 1984 -3372 9 706 495 285 31 31 chrUextra 15962972 15963262 -13041394 + DM176_I LTR Gypsy 1839 2128 -4292 9 706 1196 14 7 7 chrUextra 15963234 15963383 -13041273 - TLD3 Unknown Unknown -3 169 21 9 706 2577 165 24 78 chrUextra 15963483 15964192 -13040464 + SAR_DM Satellite Satellite 334 1004 -468 9 706 6043 1 1 4 chrUextra 15964292 15965001 -13039655 - LSU-rRNA_Dme rRNA rRNA -2462 1438 732 9 706 4644 47 2 3 chrUextra 15965101 15965810 -13038846 - ROVER-I_DM LTR Gypsy -1211 5373 4461 9 706 702 108 8 0 chrUextra 15965910 15966030 -13038626 - ARS406_DM Unknown Unknown -231 122 2 9 706 2902 180 9 10 chrUextra 15965935 15966619 -13038037 + SAR_DM Satellite Satellite 192 874 -598 9 706 1543 0 0 0 chrUextra 15966960 15967144 -13037512 - NTS_DM Other Other -56 184 1 9 706 1861 0 17 13 chrUextra 15967144 15967383 -13037273 - NTS_DM Other Other 0 240 1 9 706 228 0 89 67 chrUextra 15967383 15967428 -13037228 - NTS_DM Other Other 0 240 195 9 706 1521 11 0 0 chrUextra 15967528 15967707 -13036949 + CIRCE LINE Composite 792 970 -5386 9 706 2276 59 0 75 chrUextra 15967849 15968195 -13036461 + CIRCE LINE Composite 973 1292 -5064 9 706 247 222 0 0 chrUextra 15968170 15968224 -13036432 + DM176_I LTR Gypsy 2641 2694 -3726 9 706 246 150 0 0 chrUextra 15968397 15968437 -13036219 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 706 22 56 0 0 chrUextra 15968442 15968478 -13036178 + AT_rich Low_complexity Low_complexity 1 36 0 9 706 4339 0 2 0 chrUextra 15968550 15969046 -13035610 - LSU-rRNA_Dme rRNA rRNA 0 3900 3404 9 706 2934 190 17 8 chrUextra 15969146 15969853 -13034803 - SAR_DM Satellite Satellite -488 984 272 9 706 1939 188 37 8 chrUextra 15969956 15970440 -13034216 - SAR_DM Satellite Satellite -718 754 257 9 706 6135 0 1 3 chrUextra 15970764 15971473 -13033183 + SSU-rRNA_Dme rRNA rRNA 1256 1963 -32 9 706 1305 59 0 0 chrUextra 15971573 15971862 -13032794 + (CTTAT)n Simple_repeat Simple_repeat 1 289 0 9 706 2295 4 0 0 chrUextra 15971863 15972130 -13032526 - MDG3_LTR LTR Gypsy 0 267 1 9 706 1255 7 0 0 chrUextra 15972130 15972282 -13032374 - MDG3_I LTR Gypsy 0 4986 4835 9 706 2289 176 10 6 chrUextra 15972386 15973091 -13031565 + SAR_DM Satellite Satellite 1 707 -677 9 706 708 12 0 0 chrUextra 15973191 15973275 -13031381 + DMRT1B LINE R1 5100 5183 0 9 706 505 30 105 0 chrUextra 15973293 15973426 -13031230 + (CAGAC)n Simple_repeat Simple_repeat 1 147 0 9 706 3140 49 28 0 chrUextra 15973438 15973900 -13030756 + DMRT1A LINE R1 1 620 -4563 9 706 2910 194 15 18 chrUextra 15974000 15974709 -13029947 + SAR_DM Satellite Satellite 1 707 -208 9 706 3126 158 23 10 chrUextra 15976438 15977135 -13027521 - SAR_DM Satellite Satellite -396 1076 371 9 706 5590 0 1 37 chrUextra 15977236 15977945 -13026711 + LSU-rRNA_Dme rRNA rRNA 14 697 -3203 9 706 3338 158 10 9 chrUextra 15978057 15978754 -13025902 + SAR_DM Satellite Satellite 332 1029 -443 9 706 2069 43 0 0 chrUextra 15979663 15979920 -13024736 + PROTOP DNA P 4224 4480 0 9 706 27 81 0 0 chrUextra 15980268 15980330 -13024326 + AT_rich Low_complexity Low_complexity 1 62 0 9 706 6222 0 1 0 chrUextra 15980472 15981181 -13023475 + R2_DM LINE R2 1847 2556 -1051 9 706 2384 94 13 31 chrUextra 15981287 15981990 -13022666 + DMSAT6 Satellite Satellite 1 689 -48 9 706 5687 20 0 0 chrUextra 15982090 15982799 -13021857 + QUASIMODO_I LTR Gypsy 957 1665 -4395 9 706 2740 0 6 0 chrUextra 15982899 15983218 -13021438 - R1_DM LINE R1 -5035 321 1 9 706 3017 3 0 0 chrUextra 15983262 15983608 -13021048 - R1_DM LINE R1 0 5356 5011 9 706 2585 192 12 11 chrUextra 15983710 15984353 -13020303 + SAR_DM Satellite Satellite 267 910 -562 9 706 772 204 175 10 chrUextra 15984125 15984417 -13020239 - XDMR_DM Unknown Unknown 0 360 21 9 706 6078 0 3 4 chrUextra 15984517 15985226 -13019430 - SSU-rRNA_Dme rRNA rRNA -149 1846 1139 9 706 2594 129 41 102 chrUextra 15985326 15986035 -13018621 - PROTOP_B DNA P -171 982 317 9 706 5852 11 7 0 chrUextra 15986135 15986844 -13017812 - DMRT1B LINE R1 -3693 1490 777 9 706 781 31 0 0 chrUextra 15986944 15987040 -13017616 - DM176_I LTR Gypsy -1333 5087 4992 9 706 4362 14 0 71 chrUextra 15987033 15987653 -13017003 - DM176_I LTR Gypsy -5455 965 390 9 706 742 90 16 0 chrUextra 15987753 15987875 -13016781 - ARS406_DM Unknown Unknown -229 124 1 9 706 2991 178 9 7 chrUextra 15987782 15988462 -13016194 + SAR_DM Satellite Satellite 195 875 -597 9 706 1094 81 139 0 chrUextra 15988563 15988736 -13015920 - DMCR1A LINE CR1 -687 3783 3587 9 706 609 46 52 37 chrUextra 15988733 15988868 -13015788 - DMCR1A LINE CR1 -1255 3215 3037 9 706 3336 20 0 0 chrUextra 15988874 15989271 -13015385 - DMCR1A LINE CR1 -1555 2915 2519 9 706 6139 1 1 0 chrUextra 15989374 15990080 -13014576 - LSU-rRNA_Dme rRNA rRNA -1107 2793 2087 9 706 2807 79 10 5 chrUextra 15990180 15990587 -13014069 - R1_DM LINE R1 -4947 409 1 9 88 2155 34 0 7 chrUextra 15990620 15990889 -13013767 - R1_DM LINE R1 0 5356 5090 9 707 6179 3 0 0 chrUextra 15990989 15991698 -13012958 - LSU-rRNA_Dme rRNA rRNA -1382 2518 1810 9 707 28 48 0 0 chrUextra 15992039 15992081 -13012575 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 488 119 36 0 chrUextra 15992354 15992438 -13012218 - NTS_DM Other Other -150 90 4 9 707 24 0 0 0 chrUextra 15992624 15992648 -13012008 + AT_rich Low_complexity Low_complexity 1 24 0 9 707 1780 290 0 0 chrUextra 15992650 15993225 -13011431 + ROVER-I_DM LTR Gypsy 913 1487 -5097 9 707 545 295 38 38 chrUextra 15993771 15994124 -13010532 + Copia2_I LTR Copia 1392 1836 -2326 9 707 6035 6 3 0 chrUextra 15994225 15994934 -13009722 + DOC2_DM LINE Jockey 2260 2970 -1823 9 707 725 11 0 42 chrUextra 15995034 15995130 -13009526 + R1_DM LINE R1 4505 4596 -760 9 707 5333 3 0 0 chrUextra 15995129 15995743 -13008913 - DMRT1B LINE R1 0 5183 4570 9 707 1216 6 23 17 chrUextra 15996652 15996825 -13007831 + NTS_DM Other Other 67 240 0 9 707 1847 4 17 13 chrUextra 15996825 15997064 -13007592 + NTS_DM Other Other 1 240 0 9 707 1301 6 0 18 chrUextra 15997064 15997229 -13007427 + NTS_DM Other Other 1 162 -78 9 707 1449 93 14 0 chrUextra 15997461 15997675 -13006981 - MDG1_LTR LTR Gypsy -103 339 123 9 707 383 68 17 0 chrUextra 15997687 15997746 -13006910 + (TTA)n Simple_repeat Simple_repeat 3 62 0 9 707 1512 40 447 64 chrUextra 15997765 15998170 -13006486 - MDG1_I LTR Gypsy 0 6596 6037 9 707 34 24 0 0 chrUextra 15998374 15998415 -13006241 + AT_rich Low_complexity Low_complexity 1 41 0 9 707 21 95 0 0 chrUextra 15998628 15998691 -13005965 + AT_rich Low_complexity Low_complexity 1 63 0 9 707 2003 0 0 91 chrUextra 15998703 15998979 -13005677 + LSU-rRNA_Dme rRNA rRNA 1 251 -3649 9 707 5246 2 0 38 chrUextra 15999079 15999740 -13004916 - LSU-rRNA_Dme rRNA rRNA -3264 636 1 9 707 968 9 0 0 chrUextra 15999888 16000000 -13004656 - R1_DM LINE R1 -143 5213 5102 9 707 5373 3 0 0 chrUextra 16000000 16000597 -13004059 - R1_DM LINE R1 -255 5101 4505 9 707 3034 192 18 23 chrUextra 16000697 16001405 -13003251 + SAR_DM Satellite Satellite 1 704 -203 9 707 732 10 0 29 chrUextra 16001506 16001609 -13003047 + NTS_DM Other Other 63 162 -78 9 707 502 131 36 0 chrUextra 16001719 16001803 -13002853 + NTS_DM Other Other 4 90 -150 9 707 28 48 0 0 chrUextra 16002076 16002118 -13002538 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 2655 183 22 33 chrUextra 16002315 16003024 -13001632 + SAR_DM Satellite Satellite 1 701 -300 9 707 969 65 7 0 chrUextra 16003124 16003262 -13001394 + ARS406_DM Unknown Unknown 51 189 -164 9 707 3258 182 7 6 chrUextra 16003140 16003831 -13000825 - SAR_DM Satellite Satellite -535 937 246 9 707 3386 170 10 9 chrUextra 16003933 16004632 -13000024 + SAR_DM Satellite Satellite 355 1054 -418 9 707 22 35 0 0 chrUextra 16005573 16005602 -12999054 + AT_rich Low_complexity Low_complexity 1 29 0 9 707 1536 255 2 6 chrUextra 16005771 16006260 -12998396 - Gypsy11_I LTR Gypsy -137 3387 2901 9 707 6133 13 1 3 chrUextra 16006360 16007069 -12997587 - R1_DM LINE R1 -1354 4002 3295 9 707 2392 189 14 22 chrUextra 16007173 16007759 -12996897 + SAR_DM Satellite Satellite 496 1076 -396 9 707 526 126 87 0 chrUextra 16007774 16007877 -12996779 + SAR_DM Satellite Satellite 547 658 -814 9 707 3112 15 74 0 chrUextra 16007978 16008372 -12996284 + ROO_I LTR Pao 4864 5286 -2970 9 707 2531 48 48 0 chrUextra 16008354 16008687 -12995969 + ROO_I LTR Pao 5432 5780 -2476 9 707 2143 39 0 0 chrUextra 16008787 16009043 -12995613 - R1_DM LINE R1 -542 4814 4559 9 707 3836 13 4 7 chrUextra 16009041 16009496 -12995160 - R1_DM LINE R1 -1270 4086 3633 9 707 27 29 0 0 chrUextra 16009800 16009834 -12994822 + AT_rich Low_complexity Low_complexity 1 34 0 9 707 792 37 0 115 chrUextra 16010157 16010279 -12994377 + Baggins1 LINE LOA 5346 5453 0 9 707 2527 99 24 21 chrUextra 16011222 16011923 -12992733 - DMSAT6 Satellite Satellite 0 703 1 9 707 277 106 0 21 chrUextra 16012167 16012215 -12992441 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 707 316 85 67 17 chrUextra 16012237 16012297 -12992359 - HMSBEAGLE_I LTR Gypsy -6464 65 3 9 707 938 183 102 15 chrUextra 16012298 16012503 -12992153 - DMLTR5 LTR Gypsy 0 266 44 9 707 344 123 14 97 chrUextra 16012832 16012904 -12991752 + Baggins1 LINE LOA 5126 5191 -262 9 707 6219 0 1 0 chrUextra 16013641 16014350 -12990306 + ROO_I LTR Pao 6301 7010 -1246 9 707 6210 13 1 1 chrUextra 16014450 16015159 -12989497 + R1_DM LINE R1 3696 4404 -952 9 707 1088 0 26 20 chrUextra 16015259 16015410 -12989246 + NTS_DM Other Other 89 240 0 9 707 1910 0 17 17 chrUextra 16015410 16015650 -12989006 + NTS_DM Other Other 1 240 0 9 707 1355 6 0 18 chrUextra 16015650 16015815 -12988841 + NTS_DM Other Other 1 162 -78 9 707 306 70 0 0 chrUextra 16015925 16015968 -12988688 + NTS_DM Other Other 4 46 -194 9 707 1050 85 0 0 chrUextra 16016070 16016223 -12988433 - ARS406_DM Unknown Unknown -200 153 1 9 707 2970 180 40 7 chrUextra 16016104 16016777 -12987879 + SAR_DM Satellite Satellite 167 861 -611 9 707 6169 6 4 1 chrUextra 16016877 16017586 -12987070 - STALKER4_I LTR Gypsy -3829 2701 1991 9 707 782 40 20 0 chrUextra 16017686 16017786 -12986870 - TRANSPAC_I LTR Gypsy -4488 102 1 9 707 2989 6 0 0 chrUextra 16017786 16018116 -12986540 - TRANSPAC_LTR LTR Gypsy 0 330 1 9 707 2585 7 7 0 chrUextra 16018116 16018395 -12986261 - SSU-rRNA_Dme rRNA rRNA -1301 694 414 9 707 614 40 0 0 chrUextra 16018495 16018571 -12986085 + ACCORD2_I LTR Gypsy 1009 1084 -6128 9 707 4035 6 0 62 chrUextra 16018571 16019072 -12985584 - MICROPIA_LTR LTR Gypsy 0 476 7 9 707 883 39 7 66 chrUextra 16019067 16019204 -12985452 + R1_DM LINE R1 650 778 -4578 9 707 475 36 0 0 chrUextra 16019304 16019360 -12985296 - R1_DM LINE R1 -2175 3181 3126 9 707 5056 0 0 0 chrUextra 16019360 16019918 -12984738 - ACCORD_LTR LTR Gypsy 0 558 1 9 707 844 11 0 0 chrUextra 16019918 16020013 -12984643 - ACCORD_I LTR Gypsy 0 6288 6194 9 707 6396 1 0 0 chrUextra 16020113 16020822 -12983834 + R1_DM LINE R1 2464 3172 -2184 9 707 2517 9 3 0 chrUextra 16020922 16021250 -12983406 + STALKER4_I LTR Gypsy 6191 6519 -11 9 707 2891 3 0 6 chrUextra 16021245 16021574 -12983082 + STALKER4_LTR LTR Gypsy 76 402 0 9 707 766 0 0 0 chrUextra 16021731 16021817 -12982839 - NTS_DM Other Other -117 123 38 9 707 907 9 0 27 chrUextra 16021817 16021929 -12982727 - NTS_DM Other Other -107 133 25 9 707 1304 18 0 6 chrUextra 16021981 16022146 -12982510 - NTS_DM Other Other -39 201 38 9 707 895 18 0 27 chrUextra 16022146 16022258 -12982398 - NTS_DM Other Other -107 133 25 9 707 22 56 0 0 chrUextra 16022284 16022320 -12982336 + AT_rich Low_complexity Low_complexity 1 36 0 9 707 269 125 0 0 chrUextra 16022333 16022373 -12982283 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 707 51 31 0 0 chrUextra 16022569 16022634 -12982022 + AT_rich Low_complexity Low_complexity 1 65 0 9 707 22 35 0 0 chrUextra 16022811 16022840 -12981816 + AT_rich Low_complexity Low_complexity 1 29 0 9 707 47 33 0 0 chrUextra 16023132 16023193 -12981463 + AT_rich Low_complexity Low_complexity 1 61 0 9 707 2011 185 10 10 chrUextra 16024165 16024867 -12979789 + SAR_DM Satellite Satellite 1 702 -558 9 707 4505 30 46 4 chrUextra 16025095 16025230 -12979426 + DMRT1B LINE R1 1 141 -5042 9 707 180 0 0 0 chrUextra 16025230 16025250 -12979406 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 9 707 4505 30 46 4 chrUextra 16025250 16025676 -12978980 + DMRT1B LINE R1 142 584 -4599 9 707 6336 14 0 0 chrUextra 16025776 16026485 -12978171 + DIVER_I LTR Pao 2478 3186 -2457 9 707 6416 3 0 0 chrUextra 16026585 16027294 -12977362 - DOC LINE Jockey -652 4073 3365 9 707 1733 62 0 0 chrUextra 16027394 16027619 -12977037 + R1_DM LINE R1 393 617 -4739 9 707 2954 57 221 2 chrUextra 16027590 16028103 -12976553 + R1_DM LINE R1 1262 1887 -3469 9 707 6230 14 1 1 chrUextra 16028203 16028912 -12975744 + Copia2_I LTR Copia 1445 2153 -2009 9 707 2441 90 25 65 chrUextra 16029012 16029720 -12974936 + DMSAT6 Satellite Satellite 1 679 -110 9 707 34 24 0 0 chrUextra 16030046 16030087 -12974569 + AT_rich Low_complexity Low_complexity 1 41 0 9 707 6019 11 6 0 chrUextra 16030630 16031339 -12973317 - ROO_I LTR Pao -2901 5355 4643 9 707 6180 6 20 0 chrUextra 16031439 16032148 -12972508 + DM176_I LTR Gypsy 3318 4040 -2380 9 707 6260 3 0 0 chrUextra 16032248 16032957 -12971699 - ROO_I LTR Pao -3781 4475 3767 9 707 2119 310 3 3 chrUextra 16033075 16033761 -12970895 - Invader1_I LTR Gypsy -922 2264 1579 9 707 1740 0 0 0 chrUextra 16034675 16034864 -12969792 + R1_DM LINE R1 5168 5356 0 9 707 4734 4 0 0 chrUextra 16034862 16035384 -12969272 + LSU-rRNA_Dme rRNA rRNA 2640 3161 -739 9 707 3560 61 45 0 chrUextra 16035702 16036193 -12968463 - PROTOP_A DNA P 0 1105 593 9 707 5887 8 0 0 chrUextra 16036293 16036961 -12967695 - DOC2_DM LINE Jockey -1611 3182 2515 9 707 368 67 82 16 chrUextra 16036941 16037002 -12967654 - DOC2_DM LINE Jockey -2482 2311 2247 9 707 2799 3 0 0 chrUextra 16037102 16037410 -12967246 - LSU-rRNA_Dme rRNA rRNA -953 2947 2640 9 707 3638 2 2 0 chrUextra 16037408 16037811 -12966845 - R1_DM LINE R1 0 5356 4953 9 707 3743 58 39 0 chrUextra 16038004 16038612 -12966044 - PROTOP_A DNA P 0 1105 570 9 707 3141 180 10 17 chrUextra 16038722 16039429 -12965227 - SAR_DM Satellite Satellite -496 976 275 9 707 3578 58 69 7 chrUextra 16039556 16040235 -12964421 - PROTOP_A DNA P 0 1105 520 9 707 6472 4 0 0 chrUextra 16040338 16041047 -12963609 - SSU-rRNA_Dme rRNA rRNA -1098 897 189 9 707 3202 164 16 19 chrUextra 16041153 16041854 -12962802 - SAR_DM Satellite Satellite -569 903 205 9 707 3226 174 9 7 chrUextra 16041962 16042649 -12962007 - SAR_DM Satellite Satellite -593 879 192 9 707 28 48 0 0 chrUextra 16042996 16043038 -12961618 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 6319 1 1 1 chrUextra 16043574 16044283 -12960373 + ROO_I LTR Pao 5090 5798 -2458 9 707 5372 5 2 8 chrUextra 16044383 16045007 -12959649 + DOC LINE Jockey 4105 4724 -1 9 707 32 0 0 0 chrUextra 16045400 16045432 -12959224 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 3062 3 0 0 chrUextra 16045564 16045901 -12958755 + SSU-rRNA_Dme rRNA rRNA 1 337 -1658 9 707 1301 102 0 0 chrUextra 16046001 16046187 -12958469 + Gypsy12_I LTR Gypsy 2485 2670 -2876 9 707 3798 100 0 9 chrUextra 16046178 16046705 -12957951 + Gypsy12_I LTR Gypsy 2811 3332 -2214 9 707 6136 20 1 0 chrUextra 16046810 16047519 -12957137 - R1_DM LINE R1 -2318 3038 2329 9 707 4431 48 33 24 chrUextra 16047619 16048328 -12956328 + BATUMI_I LTR Pao 27 810 -7153 9 707 1246 6 24 18 chrUextra 16048431 16048601 -12956055 + NTS_DM Other Other 70 240 0 9 707 1355 6 0 18 chrUextra 16048601 16048766 -12955890 + NTS_DM Other Other 1 162 -78 9 707 502 131 36 0 chrUextra 16048876 16048960 -12955696 + NTS_DM Other Other 4 90 -150 9 707 2341 25 43 0 chrUextra 16049237 16049514 -12955142 + DIVER2_I LTR Pao 3341 3629 -518 9 707 3462 24 0 28 chrUextra 16049514 16049946 -12954710 + PROTOP DNA P 1 420 -4060 9 707 3624 110 110 37 chrUextra 16050046 16050755 -12953901 - BATUMI_I LTR Pao -6440 1523 763 9 707 514 119 36 0 chrUextra 16051091 16051175 -12953481 - NTS_DM Other Other -150 90 4 9 707 1355 6 0 18 chrUextra 16051285 16051450 -12953206 - NTS_DM Other Other -78 162 1 9 707 781 9 35 26 chrUextra 16051450 16051564 -12953092 - NTS_DM Other Other 0 240 126 9 707 2660 3 3 0 chrUextra 16051664 16051960 -12952696 - SSU-rRNA_Dme rRNA rRNA -1698 297 1 9 707 32 0 0 0 chrUextra 16052092 16052124 -12952532 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 2186 180 16 10 chrUextra 16052473 16053182 -12951474 - SAR_DM Satellite Satellite -470 713 1 9 707 884 27 0 9 chrUextra 16053282 16053392 -12951264 + CIRCE LINE Composite 4387 4495 -1861 9 707 3773 106 7 5 chrUextra 16053392 16053991 -12950665 + S_DM DNA Tc1 1 600 -1136 9 707 3345 168 11 9 chrUextra 16054100 16054797 -12949859 - SAR_DM Satellite Satellite -396 1076 378 9 707 3806 0 0 0 chrUextra 16054900 16055314 -12949342 - LSU-rRNA_Dme rRNA rRNA -1699 2201 1788 9 707 2101 0 8 8 chrUextra 16055358 16055609 -12949047 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1538 9 707 2577 0 0 0 chrUextra 16055711 16055995 -12948661 + LSU-rRNA_Dme rRNA rRNA 3617 3900 0 9 707 22 56 0 0 chrUextra 16056067 16056103 -12948553 + AT_rich Low_complexity Low_complexity 1 36 0 9 707 262 150 0 0 chrUextra 16056108 16056148 -12948508 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 707 262 150 0 0 chrUextra 16056200 16056240 -12948416 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 707 262 150 0 0 chrUextra 16056292 16056332 -12948324 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 707 245 174 0 21 chrUextra 16056363 16056410 -12948246 + LSU-rRNA_Dme rRNA rRNA 2570 2615 -1285 9 707 296 0 0 0 chrUextra 16056520 16056552 -12948104 - NTS_DM Other Other -171 69 38 9 707 936 9 0 27 chrUextra 16056552 16056664 -12947992 - NTS_DM Other Other -107 133 25 9 707 22 56 0 0 chrUextra 16056691 16056727 -12947929 + AT_rich Low_complexity Low_complexity 1 36 0 9 707 278 176 0 19 chrUextra 16056740 16056792 -12947864 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 268 196 0 19 chrUextra 16056823 16056875 -12947781 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 268 196 0 19 chrUextra 16056915 16056967 -12947689 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 268 196 0 19 chrUextra 16057007 16057059 -12947597 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 592 0 15 0 chrUextra 16057160 16057227 -12947429 - LSU-rRNA_Dme rRNA rRNA 0 3900 3833 9 707 6067 6 38 0 chrUextra 16057327 16058036 -12946620 + DM176_I LTR Gypsy 900 1635 -4785 9 707 6123 24 1 1 chrUextra 16058141 16058845 -12945811 - R1_DM LINE R1 -528 4828 4125 9 707 6549 0 3 1 chrUextra 16058945 16059653 -12945003 - SSU-rRNA_Dme rRNA rRNA -103 1892 1184 9 707 21 89 0 0 chrUextra 16059869 16059925 -12944731 + AT_rich Low_complexity Low_complexity 1 56 0 9 707 26 30 0 0 chrUextra 16060062 16060095 -12944561 + AT_rich Low_complexity Low_complexity 1 33 0 9 707 5197 46 65 1 chrUextra 16060563 16061272 -12943384 - PROTOP DNA P -3727 753 22 9 707 6307 16 0 3 chrUextra 16061372 16062081 -12942575 - G_DM LINE Jockey -1020 3326 2620 9 707 6443 3 1 1 chrUextra 16062181 16062890 -12941766 + G_DM LINE Jockey 1473 2181 -2165 9 707 6502 4 0 0 chrUextra 16062993 16063699 -12940957 + IDEFIX_I LTR Gypsy 1494 2199 -3429 9 707 1218 34 0 0 chrUextra 16063799 16063946 -12940710 + (CACAA)n Simple_repeat Simple_repeat 2 148 0 9 707 4434 6 8 10 chrUextra 16063986 16064508 -12940148 + DMRT1B LINE R1 403 923 -4260 9 707 2717 25 13 0 chrUextra 16064608 16064926 -12939730 - Invader2_I LTR Gypsy -1377 3215 2894 9 707 3098 47 8 3 chrUextra 16064935 16065317 -12939339 - Baggins1 LINE LOA -2508 2945 2562 9 707 725 0 0 0 chrUextra 16065417 16065498 -12939158 + 5S_DM RNA RNA 55 135 0 9 707 1186 15 0 7 chrUextra 16065722 16065858 -12938798 + 5S_DM RNA RNA 1 135 0 9 707 395 0 0 0 chrUextra 16066082 16066126 -12938530 + 5S_DM RNA RNA 1 44 -91 9 707 28 48 0 0 chrUextra 16066512 16066554 -12938102 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 32 0 0 0 chrUextra 16066883 16066915 -12937741 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 596 303 28 14 chrUextra 16067058 16067346 -12937310 + TV1I LTR Gypsy 681 972 -4991 9 707 506 130 0 0 chrUextra 16067603 16067680 -12936976 - DM412 LTR Gypsy -1489 5408 5332 9 707 225 222 0 0 chrUextra 16067677 16067731 -12936925 + QUASIMODO_I LTR Gypsy 1313 1366 -4694 9 707 2361 95 7 58 chrUextra 16067844 16068553 -12936103 + DMSAT6 Satellite Satellite 1 672 -97 9 707 2464 59 0 75 chrUextra 16068724 16069070 -12935586 + CIRCE LINE Composite 973 1292 -5064 9 707 660 363 22 28 chrUextra 16068783 16069293 -12935363 + Gypsy12_I LTR Gypsy 2863 3369 -2177 9 707 1591 29 0 93 chrUextra 16069136 16069362 -12935294 + CIRCE LINE Composite 1305 1509 -4847 9 707 2006 0 17 13 chrUextra 16069464 16069703 -12934953 - NTS_DM Other Other 0 240 1 9 707 1995 4 17 13 chrUextra 16069703 16069942 -12934714 - NTS_DM Other Other 0 240 1 9 707 1674 45 18 18 chrUextra 16069942 16070171 -12934485 - NTS_DM Other Other 0 240 12 9 707 1925 145 36 33 chrUextra 16070271 16070690 -12933966 - STALKER4_I LTR Gypsy -5773 757 228 9 707 28 48 0 0 chrUextra 16070690 16070732 -12933924 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 848 109 3 49 chrUextra 16070818 16070980 -12933676 - STALKER4_LTR LTR Gypsy -3 399 249 9 707 5452 68 21 4 chrUextra 16071888 16072596 -12932060 - FB4_DM DNA Tc1 -1513 2576 1857 9 707 6030 25 10 1 chrUextra 16072696 16073404 -12931252 - R1_DM LINE R1 -1931 3425 2712 9 707 2693 195 11 11 chrUextra 16074314 16075020 -12929636 + SAR_DM Satellite Satellite 1 705 -677 9 707 509 16 0 0 chrUextra 16075120 16075182 -12929474 + NTS_DM Other Other 72 133 -107 9 707 1350 18 0 6 chrUextra 16075182 16075347 -12929309 + NTS_DM Other Other 38 201 -39 9 707 936 9 0 27 chrUextra 16075399 16075511 -12929145 + NTS_DM Other Other 25 133 -107 9 707 1350 18 0 6 chrUextra 16075511 16075676 -12928980 + NTS_DM Other Other 38 201 -39 9 707 21 57 0 0 chrUextra 16075676 16075711 -12928945 + AT_rich Low_complexity Low_complexity 1 35 0 9 707 628 23 11 55 chrUextra 16075737 16075828 -12928828 + NTS_DM Other Other 25 111 -129 9 707 6479 6 0 0 chrUextra 16075928 16076636 -12928020 - DMRT1A LINE R1 -2543 2640 1933 9 707 954 76 6 21 chrUextra 16076736 16077444 -12927212 + RSP Satellite Satellite 1 697 0 9 707 436 136 549 124 chrUextra 16077547 16077689 -12926967 - DMCR1A LINE CR1 -3359 1111 910 9 707 2366 186 94 13 chrUextra 16077702 16078242 -12926414 - DMCR1A LINE CR1 -3718 752 169 9 707 5957 41 0 0 chrUextra 16078352 16079060 -12925596 + R1_DM LINE R1 1222 1929 -3427 9 707 6170 11 1 3 chrUextra 16079160 16079868 -12924788 + STALKER4_I LTR Gypsy 4642 5348 -1182 9 707 2845 180 90 28 chrUextra 16079968 16080676 -12923980 + HETA LINE telomeric 4515 5266 -815 9 707 6437 1 1 6 chrUextra 16080776 16081483 -12923173 + LSU-rRNA_Dme rRNA rRNA 822 1525 -2375 9 707 6151 37 0 0 chrUextra 16081584 16082292 -12922364 + DIVER_I LTR Pao 331 1038 -4605 9 707 3335 166 11 21 chrUextra 16082398 16083096 -12921560 + SAR_DM Satellite Satellite 400 1090 -382 9 707 6119 25 3 1 chrUextra 16083200 16083908 -12920748 - R1_DM LINE R1 -298 5058 4350 9 707 6212 16 0 0 chrUextra 16084008 16084716 -12919940 - ROO_I LTR Pao -3204 5052 4345 9 707 6380 0 1 1 chrUextra 16084816 16085524 -12919132 - R1_DM LINE R1 -3650 1706 999 9 707 5989 0 1 35 chrUextra 16085627 16086332 -12918324 - LSU-rRNA_Dme rRNA rRNA -3023 877 197 9 707 6529 1 1 3 chrUextra 16086432 16087140 -12917516 - LSU-rRNA_Dme rRNA rRNA -264 3636 2930 9 707 732 195 13 25 chrUextra 16087247 16087405 -12917251 + HETRP_DM Satellite Satellite 1529 1684 -188 9 707 713 219 6 52 chrUextra 16087505 16087678 -12916978 + HETRP_DM Satellite Satellite 1518 1682 -190 9 707 719 186 7 14 chrUextra 16087800 16087942 -12916714 + HETRP_DM Satellite Satellite 1529 1669 -203 9 707 435 19 0 0 chrUextra 16088048 16088100 -12916556 + (TTCTC)n Simple_repeat Simple_repeat 5 56 0 9 707 1182 7 0 0 chrUextra 16088110 16088245 -12916411 + (GAGAA)n Simple_repeat Simple_repeat 2 136 0 9 707 1189 98 0 0 chrUextra 16088856 16089019 -12915637 - HETA LINE telomeric -3490 2591 2429 9 707 1937 66 7 39 chrUextra 16089017 16089299 -12915357 - HETA LINE telomeric -3915 2166 1894 9 707 2024 79 0 0 chrUextra 16089298 16089564 -12915092 - HETA LINE telomeric -4524 1557 1292 9 707 257 146 0 0 chrUextra 16089711 16089752 -12914904 + DMCR1A LINE CR1 744 784 -3686 9 707 268 208 0 0 chrUextra 16089891 16089944 -12914712 + NOMAD_I LTR Gypsy 6520 6572 0 9 707 420 122 176 0 chrUextra 16090292 16090366 -12914290 - DNAREP1_DM LINE Penelope -201 393 307 9 707 6608 0 0 1 chrUextra 16090472 16091180 -12913476 - LSU-rRNA_Dme rRNA rRNA -757 3143 2437 9 707 6068 28 0 1 chrUextra 16091280 16091988 -12912668 + G2_DM LINE Jockey 1493 2199 -903 9 707 2818 190 35 28 chrUextra 16092109 16092791 -12911865 + SAR_DM Satellite Satellite 322 1008 -464 9 707 1054 305 46 44 chrUextra 16092908 16093588 -12911068 + Copia2_I LTR Copia 1402 2085 -1891 9 707 3789 23 0 2 chrUextra 16093704 16094137 -12910519 + R1_DM LINE R1 4925 5356 0 9 707 1785 70 12 0 chrUextra 16094170 16094412 -12910244 + R1_DM LINE R1 1 245 -5111 9 707 1105 78 0 0 chrUextra 16094512 16094666 -12909990 - ARS406_DM Unknown Unknown -199 154 1 9 707 3250 176 10 8 chrUextra 16094547 16095218 -12909438 + SAR_DM Satellite Satellite 167 839 -633 9 707 2320 276 11 20 chrUextra 16095333 16096028 -12908628 + Invader4_I LTR Gypsy 151 839 -1574 9 707 6505 6 0 0 chrUextra 16096128 16096836 -12907820 + R2_DM LINE R2 2433 3140 -467 9 707 3443 5 3 3 chrUextra 16097266 16097644 -12907012 - SSU-rRNA_Dme rRNA rRNA 0 1995 1618 9 707 428 119 55 9 chrUextra 16097749 16097859 -12906797 + CT-rich Low_complexity Low_complexity 5 119 0 9 707 327 164 38 19 chrUextra 16097878 16097984 -12906672 + GA-rich Low_complexity Low_complexity 2 109 0 9 707 3247 186 6 9 chrUextra 16098562 16099260 -12905396 + SAR_DM Satellite Satellite 195 890 -582 9 707 6194 19 0 6 chrUextra 16099360 16100068 -12904588 - FW_DM LINE Jockey -2119 2573 1870 9 707 6099 16 6 0 chrUextra 16100168 16100854 -12903802 + ACCORD2_I LTR Gypsy 102 791 -6421 9 707 659 199 7 52 chrUextra 16101145 16101299 -12903357 - HETRP_DM Satellite Satellite -208 1664 1518 9 707 721 195 13 25 chrUextra 16101400 16101558 -12903098 - HETRP_DM Satellite Satellite -188 1684 1529 9 707 3505 183 6 6 chrUextra 16101786 16102491 -12902165 - SAR_DM Satellite Satellite -416 1056 352 9 707 6473 1 3 0 chrUextra 16102592 16103300 -12901356 + FW_DM LINE Jockey 626 1335 -3357 9 707 6383 18 3 0 chrUextra 16103400 16104108 -12900548 - Gypsy12_I LTR Gypsy -841 4705 3996 9 707 385 343 27 33 chrUextra 16104349 16104795 -12899861 + BLASTOPIA_I LTR Gypsy 3541 4185 -703 9 707 6289 13 1 1 chrUextra 16105019 16105724 -12898932 + FW_DM LINE Jockey 3184 3888 -804 9 707 28 48 0 0 chrUextra 16106046 16106088 -12898568 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 32 0 0 0 chrUextra 16106416 16106448 -12898208 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 6064 16 0 6 chrUextra 16106632 16107316 -12897340 + BATUMI_I LTR Pao 5741 6420 -1543 9 707 5450 2 3 0 chrUextra 16107440 16108027 -12896629 - HOBO DNA hAT -2427 589 1 9 707 6495 1 1 4 chrUextra 16108248 16108956 -12895700 + SSU-rRNA_Dme rRNA rRNA 489 1194 -801 9 707 2254 20 0 0 chrUextra 16109056 16109307 -12895349 - MDG1_LTR LTR Gypsy -105 337 87 9 707 423 100 0 0 chrUextra 16109307 16109377 -12895279 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9 707 2291 9 342 0 chrUextra 16109381 16109764 -12894892 - MDG1_I LTR Gypsy -98 6799 6096 9 707 6422 1 3 4 chrUextra 16109864 16110572 -12894084 + SSU-rRNA_Dme rRNA rRNA 803 1509 -486 9 707 6257 4 3 3 chrUextra 16110672 16111380 -12893276 + R1_DM LINE R1 3483 4190 -1166 9 707 37 39 0 0 chrUextra 16111665 16111716 -12892940 + AT_rich Low_complexity Low_complexity 1 51 0 9 707 22 35 0 0 chrUextra 16111817 16111846 -12892810 + AT_rich Low_complexity Low_complexity 1 29 0 9 707 21 57 0 0 chrUextra 16112043 16112078 -12892578 + AT_rich Low_complexity Low_complexity 1 35 0 9 707 920 9 0 0 chrUextra 16112078 16112188 -12892468 + ALUII_DM Unknown Unknown 1 110 -130 9 707 6062 1 3 3 chrUextra 16112288 16112996 -12891660 + SSU-rRNA_Dme rRNA rRNA 764 1471 -524 9 707 6220 0 1 0 chrUextra 16113096 16113804 -12890852 - R2_DM LINE R2 -1112 2495 1787 9 707 1995 58 20 30 chrUextra 16113904 16114207 -12890449 - Gypsy12_I LTR Gypsy -5246 300 1 9 707 328 211 34 34 chrUextra 16114221 16114368 -12890288 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 9 707 652 156 124 38 chrUextra 16114426 16114612 -12890044 - Gypsy12_LTR LTR Gypsy -828 1508 1307 9 707 5820 13 16 0 chrUextra 16114712 16115420 -12889236 - DMRT1B LINE R1 -1704 3479 2761 9 707 2864 183 24 10 chrUextra 16115520 16116226 -12888430 - SAR_DM Satellite Satellite -552 920 205 9 707 1894 300 8 10 chrUextra 16116328 16117036 -12887620 - MICROPIA_I LTR Gypsy -1076 3400 2694 9 707 2607 195 42 11 chrUextra 16117137 16117844 -12886812 - SAR_DM Satellite Satellite -281 1191 463 9 707 811 0 0 0 chrUextra 16117944 16118036 -12886620 - MDG1_I LTR Gypsy -6504 92 1 9 707 2917 22 0 0 chrUextra 16118036 16118392 -12886264 - MDG1_LTR LTR Gypsy 0 442 87 9 707 423 100 0 0 chrUextra 16118392 16118462 -12886194 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9 707 411 283 18 6 chrUextra 16118478 16118645 -12886011 - Gypsy12_LTR LTR Gypsy -447 1889 1721 9 707 2076 148 78 28 chrUextra 16118790 16119422 -12885234 + Stalker2_I LTR Gypsy 291 999 -5531 9 707 1715 14 19 0 chrUextra 16119560 16119774 -12884882 + DM176_LTR LTR Gypsy 290 507 0 9 707 3574 35 0 8 chrUextra 16119774 16120263 -12884393 + DM176_I LTR Gypsy 1 485 -5935 9 707 6094 1 0 0 chrUextra 16120368 16121076 -12883580 - G2_DM LINE Jockey -1968 1134 427 9 707 561 30 0 0 chrUextra 16121260 16121327 -12883329 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 707 1672 5 0 0 chrUextra 16121327 16121525 -12883131 - Copia2_LTR_DM LTR Copia 0 198 1 9 88 2968 8 0 0 chrUextra 16121525 16121884 -12882772 - Copia2_I LTR Copia 0 4162 3804 9 708 5949 13 1 0 chrUextra 16121984 16122692 -12881964 - FW_DM LINE Jockey -230 4462 3754 9 708 1167 7 0 0 chrUextra 16122968 16123103 -12881553 + 5S_DM RNA RNA 1 135 0 9 708 1176 0 0 0 chrUextra 16123334 16123469 -12881187 + 5S_DM RNA RNA 1 135 0 9 708 966 0 0 0 chrUextra 16123600 16123710 -12880946 - ROO_I LTR Pao -8146 110 1 9 708 3719 2 0 2 chrUextra 16123710 16124139 -12880517 - ROO_LTR LTR Pao 0 428 1 9 708 2441 19 3 0 chrUextra 16124408 16124731 -12879925 + ROVER-I_DM LTR Gypsy 5008 5331 -1253 9 708 2747 3 0 3 chrUextra 16124780 16125116 -12879540 + ROVER-I_DM LTR Gypsy 5308 5642 -942 9 708 300 165 48 58 chrUextra 16125216 16125319 -12879337 + XDMR_DM Unknown Unknown 259 360 0 9 708 2846 170 14 22 chrUextra 16125234 16125924 -12878732 - SAR_DM Satellite Satellite -354 1118 434 9 708 1776 5 0 0 chrUextra 16126024 16126229 -12878427 - SSU-rRNA_Dme rRNA rRNA -1790 205 1 9 708 32 0 0 0 chrUextra 16126361 16126393 -12878263 + AT_rich Low_complexity Low_complexity 1 32 0 9 708 3041 177 6 6 chrUextra 16126834 16127504 -12877152 + SAR_DM Satellite Satellite 234 903 -569 9 708 225 35 0 0 chrUextra 16127511 16127540 -12877116 - ARS406_DM Unknown Unknown -195 158 130 9 708 657 236 156 46 chrUextra 16127800 16128128 -12876528 - GTWIN_LTR LTR Gypsy -90 405 42 9 708 842 240 0 10 chrUextra 16128131 16128347 -12876309 - GTWIN_I LTR Gypsy 0 6421 6244 9 708 1167 7 0 0 chrUextra 16128465 16128600 -12876056 - 5S_DM RNA RNA 0 135 1 9 708 1176 0 0 0 chrUextra 16128838 16128973 -12875683 - 5S_DM RNA RNA 0 135 1 9 708 2149 192 6 37 chrUextra 16129290 16129964 -12874692 + SAR_DM Satellite Satellite 1 652 -545 9 708 2219 161 9 13 chrUextra 16130064 16130768 -12873888 - SAR_DM Satellite Satellite -467 700 1 9 708 6048 4 0 3 chrUextra 16130872 16131580 -12873076 - G_DM LINE Jockey -1012 3334 2629 9 708 3129 170 10 11 chrUextra 16131681 16132388 -12872268 + SAR_DM Satellite Satellite 299 1004 -468 9 708 6169 0 0 1 chrUextra 16132488 16133196 -12871460 - DM1731_I LTR Copia -895 3081 2375 9 708 5702 3 0 0 chrUextra 16133296 16133950 -12870706 - LSU-rRNA_Dme rRNA rRNA -607 3293 2640 9 708 484 0 0 0 chrUextra 16133948 16134004 -12870652 - R1_DM LINE R1 0 5356 5301 9 708 2975 172 30 20 chrUextra 16134111 16134812 -12869844 - SAR_DM Satellite Satellite -467 1005 298 9 708 4443 1 215 38 chrUextra 16134912 16135619 -12869037 - ROVER-I_DM LTR Gypsy -5752 832 1 9 708 2599 195 16 14 chrUextra 16135720 16136428 -12868228 + SAR_DM Satellite Satellite 1 709 -300 9 708 4115 97 22 2 chrUextra 16136528 16137236 -12867420 - BATUMI_I LTR Pao -2837 5077 4281 9 708 6071 0 4 3 chrUextra 16137336 16138044 -12866612 - SSU-rRNA_Dme rRNA rRNA -164 1831 1123 9 708 1047 83 6 17 chrUextra 16138956 16139128 -12865528 + TAHRE LINE telomeric 10281 10450 -13 9 708 3862 90 0 0 chrUextra 16139125 16139660 -12864996 + TAHRE LINE telomeric 1999 2533 -7930 9 708 2260 82 0 48 chrUextra 16139760 16140468 -12864188 + DMSAT6 Satellite Satellite 1 674 -92 9 708 3281 234 35 18 chrUextra 16140568 16142073 -12862583 + SAR_DM Satellite Satellite 1 1529 -208 9 708 2270 170 21 11 chrUextra 16142204 16142879 -12861777 + SAR_DM Satellite Satellite 1 682 -749 9 708 5518 11 0 0 chrUextra 16142992 16143700 -12860956 - DM176_I LTR Gypsy -32 6388 5681 9 708 2121 115 14 14 chrUextra 16143800 16144500 -12860156 - DMSAT6 Satellite Satellite -80 700 1 9 708 288 0 0 0 chrUextra 16144608 16144640 -12860016 + (TAA)n Simple_repeat Simple_repeat 3 34 0 9 708 1672 5 0 0 chrUextra 16144640 16144838 -12859818 - Copia2_LTR_DM LTR Copia 0 198 1 9 708 3999 13 0 0 chrUextra 16144838 16145316 -12859340 - Copia2_I LTR Copia 0 4162 3685 9 708 2720 178 30 26 chrUextra 16145431 16146122 -12858534 - SAR_DM Satellite Satellite -354 1118 425 9 708 5626 27 0 0 chrUextra 16146224 16146932 -12857724 + STALKER4_I LTR Gypsy 3171 3878 -2652 9 708 1720 20 0 0 chrUextra 16147032 16147236 -12857420 - PROTOP_A DNA P -901 204 1 9 708 2949 93 18 44 chrUextra 16147236 16147740 -12856916 + TART LINE telomeric 6926 7416 -7061 9 708 373 194 87 10 chrUextra 16147897 16148001 -12856655 - DNAREP1_DM LINE Penelope -416 178 67 9 708 506 225 70 0 chrUextra 16148135 16148277 -12856379 + HETRP_DM Satellite Satellite 1518 1669 -203 9 708 614 179 32 16 chrUextra 16148422 16148547 -12856109 + HETRP_DM Satellite Satellite 1518 1644 -228 9 708 2886 175 38 10 chrUextra 16149463 16150156 -12854500 + SAR_DM Satellite Satellite 192 903 -569 9 708 852 0 0 0 chrUextra 16150264 16150362 -12854294 - FW_DM LINE Jockey -4594 98 1 9 708 2310 4 4 11 chrUextra 16150696 16150972 -12853684 - SSU-rRNA_Dme rRNA rRNA 0 1995 1722 9 708 2849 196 20 23 chrUextra 16151072 16151778 -12852878 + SAR_DM Satellite Satellite 1 704 -216 9 708 6096 0 3 3 chrUextra 16151880 16152588 -12852068 + SSU-rRNA_Dme rRNA rRNA 1002 1709 -286 9 708 1750 18 64 0 chrUextra 16152688 16152907 -12851749 + Invader2_LTR LTR Gypsy 34 266 0 9 708 26 0 0 0 chrUextra 16152914 16152940 -12851716 + AT_rich Low_complexity Low_complexity 1 26 0 9 708 284 75 109 24 chrUextra 16152944 16153109 -12851547 + (TA)n Simple_repeat Simple_repeat 1 179 0 9 708 318 186 31 0 chrUextra 16153119 16153216 -12851440 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 9 708 461 6 129 31 chrUextra 16153218 16153381 -12851275 + (TA)n Simple_repeat Simple_repeat 1 179 0 9 708 5922 1 0 0 chrUextra 16153496 16154204 -12850452 - ROVER-I_DM LTR Gypsy -4037 2547 1840 9 708 3371 102 74 94 chrUextra 16154311 16155012 -12849644 + TART LINE telomeric 6985 7671 -6806 9 708 880 72 4 19 chrUextra 16155128 16155810 -12848846 + RSP Satellite Satellite 1 672 0 9 708 2443 182 68 31 chrUextra 16155921 16156628 -12848028 - SAR_DM Satellite Satellite -281 1191 459 9 708 2068 149 13 90 chrUextra 16156731 16157254 -12847402 - TART LINE telomeric -7383 7094 6655 9 708 786 112 53 41 chrUextra 16157270 16157436 -12847220 - TART LINE telomeric -10448 4029 3883 9 708 5878 17 8 0 chrUextra 16157538 16158244 -12846412 + DMRT1A LINE R1 3601 4312 -871 9 708 3996 49 7 2 chrUextra 16158344 16158892 -12845764 - IDEFIX_I LTR Gypsy -4399 1229 679 9 708 1194 38 6 0 chrUextra 16158892 16159052 -12845604 - IDEFIX_I LTR Gypsy -5311 317 157 9 708 21 0 0 0 chrUextra 16159784 16159805 -12844851 + AT_rich Low_complexity Low_complexity 1 21 0 9 708 2773 187 29 25 chrUextra 16159960 16160668 -12843988 - SAR_DM Satellite Satellite -1035 711 1 9 708 5163 28 0 47 chrUextra 16160768 16161476 -12843180 + MAX_I LTR Pao 6806 7480 -434 9 708 240 267 0 0 chrUextra 16161622 16161682 -12842974 + TV1I LTR Gypsy 5903 5962 -1 9 708 2973 192 14 22 chrUextra 16162387 16163092 -12841564 + SAR_DM Satellite Satellite 1 699 -208 9 708 5988 1 0 1 chrUextra 16163192 16163900 -12840756 + LSU-rRNA_Dme rRNA rRNA 392 1098 -2802 9 708 2950 166 14 14 chrUextra 16164018 16164708 -12839948 + SAR_DM Satellite Satellite 326 1015 -457 9 708 697 193 0 7 chrUextra 16165260 16165406 -12839250 + DMLTR5 LTR Gypsy 122 266 0 9 708 351 49 65 16 chrUextra 16165405 16165467 -12839189 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 708 268 213 0 0 chrUextra 16166254 16166315 -12838341 + DM176_I LTR Gypsy 1839 1899 -4521 9 708 6113 0 0 0 chrUextra 16166424 16167132 -12837524 - Invader6_I LTR Gypsy -209 3890 3183 9 708 2743 80 68 13 chrUextra 16167232 16167940 -12836716 - Gypsy12_I LTR Gypsy -27 5519 4773 9 708 5948 4 0 0 chrUextra 16168040 16168748 -12835908 - MDG1_I LTR Gypsy -1479 5117 4410 9 708 2586 81 13 10 chrUextra 16168848 16169556 -12835100 - DMSAT6 Satellite Satellite -73 709 1 9 708 1322 259 110 22 chrUextra 16169684 16170364 -12834292 + ROVER-I_DM LTR Gypsy 545 1284 -5300 9 708 1936 9 0 0 chrUextra 16170464 16170687 -12833969 + DMLTR5 LTR Gypsy 44 266 0 9 708 1158 122 0 0 chrUextra 16170687 16171171 -12833485 + (TA)n Simple_repeat Simple_repeat 1 484 0 9 708 3647 0 0 54 chrUextra 16171514 16171979 -12832677 + LSU-rRNA_Dme rRNA rRNA 1 440 -3460 9 708 4067 77 82 2 chrUextra 16173696 16174280 -12830376 + Gypsy12_I LTR Gypsy 4916 5546 0 9 708 563 168 8 48 chrUextra 16174279 16174404 -12830252 + Gypsy12_LTR LTR Gypsy 1 120 -2216 9 708 4457 2 0 0 chrUextra 16174504 16175011 -12829645 - SSU-rRNA_Dme rRNA rRNA -1488 507 1 9 708 32 0 0 0 chrUextra 16175143 16175175 -12829481 + AT_rich Low_complexity Low_complexity 1 32 0 9 708 3794 116 11 9 chrUextra 16175313 16176020 -12828636 - Gypsy2_I LTR Gypsy -4982 2030 1269 9 708 5020 48 27 4 chrUextra 16176928 16177636 -12827020 - IDEFIX_I LTR Gypsy -1684 3944 3221 9 708 5739 25 1 3 chrUextra 16177736 16178444 -12826212 + R1_DM LINE R1 3174 3880 -1476 9 708 5783 21 1 1 chrUextra 16178544 16179252 -12825404 - R1_DM LINE R1 -1100 4256 3549 9 708 376 22 0 0 chrUextra 16179352 16179397 -12825259 - NTS_DM Other Other -195 45 1 9 708 1825 8 17 13 chrUextra 16179397 16179636 -12825020 - NTS_DM Other Other 0 240 1 9 708 1716 25 17 17 chrUextra 16179636 16179876 -12824780 - NTS_DM Other Other 0 240 1 9 708 1204 22 22 22 chrUextra 16179876 16180060 -12824596 - NTS_DM Other Other 0 240 57 9 708 5448 45 7 3 chrUextra 16180160 16180868 -12823788 + R1_DM LINE R1 1018 1728 -3628 9 708 3745 65 4 4 chrUextra 16180968 16181476 -12823180 - R1_DM LINE R1 -4848 508 1 9 708 954 26 0 0 chrUextra 16181509 16181623 -12823033 - R1_DM LINE R1 0 5356 5243 9 708 476 0 0 0 chrUextra 16181620 16181676 -12822980 - R1_DM LINE R1 -290 5066 5011 9 708 1798 83 14 0 chrUextra 16182070 16182484 -12822172 + G5_DM LINE Jockey 3972 4564 -292 9 708 2334 83 1 42 chrUextra 16182591 16183282 -12821374 + DMSAT6 Satellite Satellite 1 662 -3 9 708 7788 224 39 56 chrUextra 16183392 16185455 -12819201 - R1_DM LINE R1 -3328 2028 1 9 708 2275 4 0 0 chrUextra 16185455 16185716 -12818940 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2372 9 708 5816 11 1 0 chrUextra 16185816 16186524 -12818132 - BLOOD_I LTR Gypsy -2922 3691 2983 9 708 1004 103 6 17 chrUextra 16186630 16186807 -12817849 + SAR_DM Satellite Satellite 729 903 -569 9 708 2323 176 6 10 chrUextra 16186822 16187332 -12817324 + SAR_DM Satellite Satellite 496 1003 -469 9 708 1798 177 6 79 chrUextra 16187452 16188059 -12816597 - SAR_DM Satellite Satellite -796 562 1 9 708 603 26 0 0 chrUextra 16188064 16188140 -12816516 + ARS406_DM Unknown Unknown 90 165 -188 9 708 1516 265 57 38 chrUextra 16188241 16188948 -12815708 - ROVER-I_DM LTR Gypsy -4449 2135 1416 9 708 3072 167 10 13 chrUextra 16189056 16189736 -12814920 + SAR_DM Satellite Satellite 399 1076 -396 9 708 2324 102 25 8 chrUextra 16189857 16190564 -12814092 - DMSAT6 Satellite Satellite -73 719 1 9 708 1252 18 0 6 chrUextra 16190692 16190857 -12813799 + NTS_DM Other Other 38 201 -39 9 708 22 35 0 0 chrUextra 16190857 16190886 -12813770 + AT_rich Low_complexity Low_complexity 1 29 0 9 708 378 35 0 17 chrUextra 16190901 16190959 -12813697 + NTS_DM Other Other 145 201 -39 9 708 870 9 0 27 chrUextra 16191011 16191123 -12813533 + NTS_DM Other Other 25 133 -107 9 708 1252 18 0 6 chrUextra 16191123 16191288 -12813368 + NTS_DM Other Other 38 201 -39 9 708 21 57 0 0 chrUextra 16191288 16191323 -12813333 + AT_rich Low_complexity Low_complexity 1 35 0 9 708 5787 3 18 0 chrUextra 16191474 16191551 -12813105 + QUASIMODO_I LTR Gypsy 256 333 -5727 9 708 183 42 0 0 chrUextra 16191551 16191575 -12813081 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 9 708 5787 3 18 0 chrUextra 16191575 16192180 -12812476 + QUASIMODO_I LTR Gypsy 334 948 -5112 9 708 5768 16 1 0 chrUextra 16192280 16192988 -12811668 + STALKER4_I LTR Gypsy 2387 3095 -3435 9 708 5691 23 0 0 chrUextra 16193096 16193796 -12810860 + MDG1_I LTR Gypsy 2625 3324 -3272 9 708 3034 178 19 8 chrUextra 16193899 16194603 -12810053 - SAR_DM Satellite Satellite -416 1056 346 9 708 2882 59 0 2 chrUextra 16194704 16195111 -12809545 - BATUMI_I LTR Pao -255 7708 7303 9 708 2042 43 11 7 chrUextra 16195134 16195412 -12809244 + BATUMI_I LTR Pao 6427 6705 -1258 9 708 34 24 0 0 chrUextra 16195512 16195553 -12809103 + AT_rich Low_complexity Low_complexity 1 41 0 9 708 21 95 0 0 chrUextra 16195766 16195829 -12808827 + AT_rich Low_complexity Low_complexity 1 63 0 9 708 2867 0 0 69 chrUextra 16195841 16196220 -12808436 + LSU-rRNA_Dme rRNA rRNA 1 353 -3547 9 708 3151 175 6 16 chrUextra 16196320 16197028 -12807628 + SAR_DM Satellite Satellite 406 1106 -366 9 708 1374 0 0 0 chrUextra 16197128 16197295 -12807361 - NTS_DM Other Other -36 204 38 9 708 1142 0 0 0 chrUextra 16197295 16197428 -12807228 - NTS_DM Other Other -107 133 1 9 708 1756 17 17 17 chrUextra 16197428 16197668 -12806988 - NTS_DM Other Other 0 240 1 9 708 1084 24 24 24 chrUextra 16197668 16197836 -12806820 - NTS_DM Other Other 0 240 73 9 708 5706 19 0 17 chrUextra 16197936 16198644 -12806012 - CIRCE LINE Composite -2225 4131 3436 9 708 2934 187 9 7 chrUextra 16198744 16199433 -12805223 - SAR_DM Satellite Satellite -588 884 195 9 708 627 117 9 0 chrUextra 16199340 16199451 -12805205 + ARS406_DM Unknown Unknown 1 112 -241 9 708 6117 1 0 0 chrUextra 16200358 16201065 -12803591 + DMRT1A LINE R1 1512 2218 -2965 9 708 4154 8 4 0 chrUextra 16201165 16201654 -12803002 - R1_DM LINE R1 -4865 491 1 9 708 1470 0 225 0 chrUextra 16201654 16201872 -12802784 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2366 9 708 1959 168 43 24 chrUextra 16201974 16202677 -12801979 + SAR_DM Satellite Satellite 1 716 -416 9 708 4950 3 0 0 chrUextra 16202779 16203348 -12801308 + LSU-rRNA_Dme rRNA rRNA 2084 2652 -1248 9 708 1223 7 0 0 chrUextra 16203343 16203486 -12801170 + R1_DM LINE R1 4353 4495 -861 9 708 1719 158 35 3 chrUextra 16203586 16204273 -12800383 + SAR_DM Satellite Satellite 1 709 -749 9 708 848 332 20 21 chrUextra 16204433 16205031 -12799625 + MICROPIA_I LTR Gypsy 118 710 -3389 9 708 2878 183 17 11 chrUextra 16205200 16205906 -12798750 + SAR_DM Satellite Satellite 263 972 -500 9 708 2295 37 3 0 chrUextra 16206816 16207115 -12797541 - QUASIMODO_I LTR Gypsy -3940 2120 1821 9 708 2760 52 2 13 chrUextra 16207124 16207517 -12797139 - QUASIMODO_I LTR Gypsy -4450 1610 1222 9 708 3962 7 2 0 chrUextra 16207621 16208081 -12796575 + QUASIMODO_LTR LTR Gypsy 198 658 0 9 708 2045 8 0 8 chrUextra 16208081 16208328 -12796328 + QUASIMODO_I LTR Gypsy 1 245 -5815 9 708 5848 4 1 0 chrUextra 16208428 16209135 -12795521 + STALKER4_I LTR Gypsy 2860 3567 -2963 9 708 2911 185 7 7 chrUextra 16209238 16209919 -12794737 + SAR_DM Satellite Satellite 230 910 -562 9 708 300 94 19 0 chrUextra 16209889 16209942 -12794714 - ARS406_DM Unknown Unknown -278 75 22 9 708 34 24 0 0 chrUextra 16210147 16210188 -12794468 + AT_rich Low_complexity Low_complexity 1 41 0 9 708 6036 3 1 0 chrUextra 16210849 16211556 -12793100 + ROO_I LTR Pao 4956 5663 -2593 9 708 5143 60 0 0 chrUextra 16211658 16212363 -12792293 - IDEFIX_I LTR Gypsy -1240 4388 3684 9 708 30 27 0 0 chrUextra 16212474 16212511 -12792145 + AT_rich Low_complexity Low_complexity 1 37 0 9 708 1486 112 8 4 chrUextra 16212763 16213006 -12791650 + BS2 LINE Jockey 14 257 -4464 9 708 1032 55 18 12 chrUextra 16213005 16213170 -12791486 - G5_DM LINE Jockey 0 4856 4691 9 708 1127 0 0 0 chrUextra 16213270 16213399 -12791257 + Copia_I LTR Copia 4465 4593 0 9 708 2219 4 4 4 chrUextra 16213399 16213675 -12790981 + Copia_LTR LTR Copia 1 276 0 9 708 1663 18 13 18 chrUextra 16213675 16213900 -12790756 - NTS_DM Other Other -16 224 1 9 708 504 0 52 39 chrUextra 16213900 16213977 -12790679 - NTS_DM Other Other 0 240 163 9 708 5790 14 1 0 chrUextra 16214077 16214784 -12789872 + STALKER4_I LTR Gypsy 2391 3098 -3432 9 708 6107 4 3 0 chrUextra 16214884 16215591 -12789065 + SSU-rRNA_Dme rRNA rRNA 31 739 -1256 9 708 2589 193 8 21 chrUextra 16215691 16216358 -12788298 + SAR_DM Satellite Satellite 462 1119 -353 9 708 340 222 9 18 chrUextra 16216272 16216382 -12788274 - XDMR_DM Unknown Unknown 0 360 252 9 708 5773 18 0 0 chrUextra 16216498 16217205 -12787451 + QUASIMODO_I LTR Gypsy 2326 3032 -3028 9 708 488 15 0 0 chrUextra 16217305 16217370 -12787286 + NTS_DM Other Other 69 133 -107 9 708 1252 18 0 6 chrUextra 16217370 16217535 -12787121 + NTS_DM Other Other 38 201 -39 9 708 870 9 0 27 chrUextra 16217587 16217699 -12786957 + NTS_DM Other Other 25 133 -107 9 708 1252 18 0 6 chrUextra 16217699 16217864 -12786792 + NTS_DM Other Other 38 201 -39 9 708 727 11 0 32 chrUextra 16217916 16218010 -12786646 + NTS_DM Other Other 25 115 -125 9 708 2956 183 9 9 chrUextra 16218118 16218817 -12785839 - SAR_DM Satellite Satellite -396 1076 378 9 708 4086 52 37 0 chrUextra 16218919 16219462 -12785194 + TART_B1 LINE telomeric 2963 3525 -7129 9 708 1218 77 18 0 chrUextra 16219456 16219626 -12785030 + TART_B1 LINE telomeric 4319 4491 -6163 9 708 6152 1 1 1 chrUextra 16219726 16220433 -12784223 - NOMAD_I LTR Gypsy -2672 3900 3194 9 708 2409 82 10 28 chrUextra 16220533 16221240 -12783416 - DMSAT6 Satellite Satellite -72 693 1 9 708 779 72 24 8 chrUextra 16221821 16221947 -12782709 - STALKER4_I LTR Gypsy -5645 885 758 9 708 5315 36 4 11 chrUextra 16222155 16222854 -12781802 + BATUMI_I LTR Pao 1395 2088 -5875 9 708 2273 3 3 3 chrUextra 16222954 16223238 -12781418 + DM176_I LTR Gypsy 6137 6420 0 9 708 2794 23 15 67 chrUextra 16223238 16223654 -12781002 + DM176_LTR LTR Gypsy 1 360 -147 9 708 3088 170 10 11 chrUextra 16223761 16224464 -12780192 - SAR_DM Satellite Satellite -504 968 267 9 708 5901 3 0 0 chrUextra 16224596 16225275 -12779381 + LSU-rRNA_Dme rRNA rRNA 1788 2466 -1434 9 708 1910 37 4 0 chrUextra 16225375 16225616 -12779040 + PROTOP_B DNA P 869 1110 -43 9 708 977 147 182 4 chrUextra 16225613 16225838 -12778818 - DMCR1A LINE CR1 -1125 3345 3081 9 708 748 160 140 6 chrUextra 16225925 16226082 -12778574 + DMLTR5 LTR Gypsy 40 217 -49 9 708 2440 74 112 0 chrUextra 16226192 16226585 -12778071 + TART LINE telomeric 7403 7839 -6638 9 708 1546 109 224 0 chrUextra 16226585 16226889 -12777767 + TAHRE LINE telomeric 10013 10384 -79 9 708 6016 3 0 0 chrUextra 16226989 16227696 -12776960 + DM176_I LTR Gypsy 655 1361 -5059 9 708 6033 4 1 0 chrUextra 16227796 16228503 -12776153 + FW_DM LINE Jockey 973 1680 -3012 9 708 2777 200 23 8 chrUextra 16228604 16229310 -12775346 - SAR_DM Satellite Satellite -498 974 259 9 708 801 114 23 0 chrUextra 16229410 16229542 -12775114 + DNAREP1_DM LINE Penelope 31 165 -429 9 708 805 171 67 16 chrUextra 16229598 16229813 -12774843 + DNAREP1_DM LINE Penelope 117 332 -262 9 708 298 172 203 79 chrUextra 16229797 16229974 -12774682 - DNAREP1_DM LINE Penelope -380 214 16 9 708 3037 0 3 0 chrUextra 16230577 16230924 -12773732 - SSU-rRNA_Dme rRNA rRNA 0 1995 1648 9 708 3167 168 16 8 chrUextra 16231025 16231728 -12772928 + SAR_DM Satellite Satellite 287 994 -478 9 708 467 144 49 35 chrUextra 16232638 16232782 -12771874 + NTS_DM Other Other 95 240 0 9 708 285 104 21 0 chrUextra 16232782 16232830 -12771826 + NTS_DM Other Other 1 49 -191 9 708 1054 150 29 21 chrUextra 16232912 16233150 -12771506 + NTS_DM Other Other 1 240 0 9 708 285 104 21 0 chrUextra 16233150 16233198 -12771458 + NTS_DM Other Other 1 49 -191 9 708 328 203 0 0 chrUextra 16233281 16233345 -12771311 + NTS_DM Other Other 1 64 -176 9 708 6237 0 0 0 chrUextra 16233445 16234152 -12770504 - NOMAD_I LTR Gypsy -4540 2032 1326 9 708 3495 7 0 0 chrUextra 16234252 16234676 -12769980 + DOC LINE Jockey 4302 4725 0 9 708 5840 1 13 0 chrUextra 16235061 16235766 -12768890 + ROO_I LTR Pao 53 766 -7490 9 708 5056 22 3 0 chrUextra 16235866 16236492 -12768164 - PROTOP_A DNA P -477 628 1 9 708 602 85 0 0 chrUextra 16236492 16236573 -12768083 - STALKER4_I LTR Gypsy -6262 268 188 9 708 1666 0 0 0 chrUextra 16236673 16236862 -12767794 - LSU-rRNA_Dme rRNA rRNA -1924 1976 1788 9 708 3974 2 4 4 chrUextra 16236906 16237380 -12767276 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1315 9 708 5616 41 4 0 chrUextra 16237481 16238187 -12766469 + G5A_DM LINE Jockey 1963 2671 -170 9 708 2991 190 9 4 chrUextra 16238287 16238981 -12765675 - SAR_DM Satellite Satellite -552 920 224 9 708 470 93 0 0 chrUextra 16238919 16238994 -12765662 + ARS406_DM Unknown Unknown 1 75 -278 9 708 4797 21 103 0 chrUextra 16239094 16239801 -12764855 - FW_DM LINE Jockey -90 4602 3823 9 708 741 12 0 0 chrUextra 16239904 16239990 -12764666 + NOMAD_LTR LTR Gypsy 433 518 0 9 708 5371 0 5 0 chrUextra 16239990 16240608 -12764048 + NOMAD_I LTR Gypsy 1 621 -5951 9 708 2180 32 54 0 chrUextra 16240708 16240986 -12763670 - PROTOP DNA P -4187 293 1 9 708 5236 7 0 0 chrUextra 16241515 16242123 -12762533 - DM1731_I LTR Copia -3368 608 1 9 708 829 20 0 0 chrUextra 16242123 16242222 -12762434 - DM1731_LTR LTR Copia 0 336 238 9 708 5740 27 1 4 chrUextra 16242322 16243029 -12761627 + MAX_I LTR Pao 1994 2698 -5216 9 708 5995 173 3 15 chrUextra 16243130 16244643 -12760013 - IDEFIX_I LTR Gypsy -3165 3847 1209 9 708 6057 4 0 6 chrUextra 16244743 16245450 -12759206 - MICROPIA_I LTR Gypsy -1085 3391 2689 9 708 2775 188 35 10 chrUextra 16246365 16247064 -12757592 - SAR_DM Satellite Satellite -1072 715 1 9 708 23 0 0 0 chrUextra 16247746 16247769 -12756887 + AT_rich Low_complexity Low_complexity 1 23 0 9 708 3742 2 2 0 chrUextra 16247971 16248402 -12756254 + LSU-rRNA_Dme rRNA rRNA 3469 3900 0 9 708 22 56 0 0 chrUextra 16248474 16248510 -12756146 + AT_rich Low_complexity Low_complexity 1 36 0 9 708 246 150 0 0 chrUextra 16248515 16248555 -12756101 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 708 246 150 0 0 chrUextra 16248607 16248647 -12756009 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 708 6035 3 1 0 chrUextra 16248778 16249485 -12755171 - Invader3_I LTR Gypsy -1139 3749 3042 9 708 2752 184 24 32 chrUextra 16249589 16250292 -12754364 - SAR_DM Satellite Satellite -1051 697 1 9 708 1555 16 5 10 chrUextra 16250392 16250587 -12754069 - Gypsy_LTR LTR Gypsy -288 194 1 9 708 485 266 16 16 chrUextra 16250587 16250773 -12753883 + Copia_I LTR Copia 3735 3920 -673 9 708 403 88 179 8 chrUextra 16250942 16251070 -12753586 - TART LINE telomeric -3998 10479 10370 9 708 2667 203 16 22 chrUextra 16251204 16251906 -12752750 + SAR_DM Satellite Satellite 1 698 -208 9 708 1211 298 48 13 chrUextra 16252175 16252713 -12751943 - Invader1_I LTR Gypsy -919 2267 1711 9 708 740 30 0 0 chrUextra 16252813 16252913 -12751743 + Invader1_I LTR Gypsy 2980 3079 -107 9 88 460 0 0 0 chrUextra 16252925 16252979 -12751677 + Invader1_I LTR Gypsy 3133 3186 0 9 709 3591 12 2 0 chrUextra 16252979 16253401 -12751255 + Invader1_LTR LTR Gypsy 1 423 0 9 709 6058 1 0 0 chrUextra 16253620 16254327 -12750329 + ROO_I LTR Pao 5335 6041 -2215 9 709 22 56 0 0 chrUextra 16255617 16255653 -12749003 + AT_rich Low_complexity Low_complexity 1 36 0 9 709 6025 4 0 0 chrUextra 16256041 16256741 -12747915 - Invader3_I LTR Gypsy -4188 700 1 9 709 781 21 0 0 chrUextra 16256848 16256943 -12747713 + TRANSPAC_I LTR Gypsy 4496 4590 0 9 709 2839 9 0 0 chrUextra 16256942 16257272 -12747384 + TRANSPAC_LTR LTR Gypsy 1 330 0 9 709 2343 3 3 7 chrUextra 16257272 16257555 -12747101 + LSU-rRNA_Dme rRNA rRNA 1157 1438 -2462 9 709 3525 184 4 1 chrUextra 16257656 16258359 -12746297 - ROVER-I_DM LTR Gypsy -2687 3897 3193 9 709 5702 37 0 0 chrUextra 16259269 16259976 -12744680 + MDG1_I LTR Gypsy 3713 4419 -2177 9 709 5792 18 23 0 chrUextra 16260076 16260783 -12743873 - R1_DM LINE R1 -1541 3815 3093 9 709 3437 99 0 9 chrUextra 16260883 16261424 -12743232 - R1_DM LINE R1 -4247 1109 574 9 709 906 107 30 30 chrUextra 16261425 16261589 -12743067 - R1_DM LINE R1 -5184 172 9 9 709 298 0 0 0 chrUextra 16262596 16262632 -12742024 + MAX_I LTR Pao 920 955 -6959 9 709 1203 108 154 102 chrUextra 16262664 16263066 -12741590 + MAX_I LTR Pao 932 1354 -6560 9 709 5883 3 3 1 chrUextra 16263304 16264011 -12740645 + R1_DM LINE R1 668 1375 -3981 9 709 2582 180 7 8 chrUextra 16264116 16264816 -12739840 - SAR_DM Satellite Satellite -749 699 1 9 709 3422 0 2 60 chrUextra 16264918 16265370 -12739286 - LSU-rRNA_Dme rRNA rRNA -3474 426 1 9 709 21 95 0 0 chrUextra 16265382 16265445 -12739211 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 6016 0 0 1 chrUextra 16265725 16266432 -12738224 + LSU-rRNA_Dme rRNA rRNA 475 1180 -2720 9 709 51 31 0 0 chrUextra 16266588 16266653 -12738003 + AT_rich Low_complexity Low_complexity 1 65 0 9 709 22 35 0 0 chrUextra 16266828 16266857 -12737799 + AT_rich Low_complexity Low_complexity 1 29 0 9 709 220 141 46 15 chrUextra 16267144 16267209 -12737447 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 709 5775 16 13 0 chrUextra 16267339 16268046 -12736610 + DOC2_DM LINE Jockey 2884 3599 -1194 9 709 729 44 0 0 chrUextra 16268146 16268236 -12736420 - FB4_DM DNA Tc1 -3999 90 1 9 709 2192 166 88 7 chrUextra 16268236 16268690 -12735966 + FW_DM LINE Jockey 1026 1516 -3176 9 709 607 111 10 0 chrUextra 16268739 16268838 -12735818 + DM297_LTR LTR Gypsy 1 100 -314 9 709 3109 0 6 0 chrUextra 16268953 16269317 -12735339 - DM1731_I LTR Copia -3610 366 1 9 709 2667 39 0 0 chrUextra 16269317 16269653 -12735003 - DM1731_LTR LTR Copia 0 336 1 9 709 888 87 3 15 chrUextra 16269760 16270417 -12734239 + RSP Satellite Satellite 1 649 0 9 709 2966 191 4 7 chrUextra 16270567 16271265 -12733391 + SAR_DM Satellite Satellite 208 903 -569 9 709 3026 172 13 21 chrUextra 16271374 16272081 -12732575 + SAR_DM Satellite Satellite 399 1099 -373 9 709 329 217 189 0 chrUextra 16272181 16272287 -12732369 + LINEJ1_DM LINE Jockey 4682 4807 -213 9 709 812 94 0 0 chrUextra 16272988 16273115 -12731541 - ARS406_DM Unknown Unknown -226 127 1 9 709 2981 161 7 19 chrUextra 16273019 16273695 -12730961 + SAR_DM Satellite Satellite 192 859 -613 9 709 5961 18 0 0 chrUextra 16273795 16274502 -12730154 - Gypsy4_I LTR Gypsy -2215 4073 3367 9 709 5440 26 0 1 chrUextra 16274602 16275288 -12729368 + MDG1_I LTR Gypsy 5421 6105 -491 9 709 21 0 0 0 chrUextra 16275288 16275309 -12729347 + AT_rich Low_complexity Low_complexity 1 21 0 9 709 322 178 50 101 chrUextra 16275442 16275561 -12729095 - Copia_I LTR Copia -80 4513 4401 9 709 186 43 0 0 chrUextra 16275619 16275642 -12729014 + (TTTAA)n Simple_repeat Simple_repeat 5 27 0 9 709 1342 207 47 6 chrUextra 16275795 16276116 -12728540 + HETA LINE telomeric 4020 4353 -1728 9 709 2405 48 6 0 chrUextra 16276234 16276549 -12728107 + PROTOP DNA P 4164 4480 0 9 709 195 139 0 0 chrUextra 16277203 16277239 -12727417 + (GA)n Simple_repeat Simple_repeat 2 37 0 9 709 186 71 0 0 chrUextra 16277663 16277691 -12726965 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 9 709 5654 20 10 1 chrUextra 16277830 16278537 -12726119 + R1_DM LINE R1 3188 3900 -1456 9 709 5596 0 1 3 chrUextra 16278637 16279344 -12725312 - DM412 LTR Gypsy -5165 1732 1027 9 709 2489 184 7 9 chrUextra 16279455 16280037 -12724619 - SAR_DM Satellite Satellite -396 1076 496 9 709 796 30 0 0 chrUextra 16280042 16280142 -12724514 + ARS406_DM Unknown Unknown 90 189 -164 9 709 294 0 21 0 chrUextra 16280253 16280300 -12724356 + TABOR_I LTR Gypsy 1325 1372 -4964 9 709 5836 0 1 0 chrUextra 16280285 16280958 -12723698 + TABOR_I LTR Gypsy 3258 3931 -2405 9 709 5979 8 0 0 chrUextra 16281058 16281765 -12722891 - R1_DM LINE R1 -1939 3417 2711 9 709 2003 0 0 0 chrUextra 16281865 16282098 -12722558 - DOC LINE Jockey -1387 3338 3106 9 709 2784 37 20 0 chrUextra 16282672 16283025 -12721631 - FW_DM LINE Jockey -4332 360 1 9 709 2762 40 0 0 chrUextra 16283033 16283379 -12721277 + R1_DM LINE R1 1377 1722 -3634 9 709 5451 0 1 0 chrUextra 16284286 16284946 -12719710 + ROO_I LTR Pao 7596 8256 0 9 709 402 0 0 0 chrUextra 16284946 16284993 -12719663 + ROO_LTR LTR Pao 1 47 -381 9 709 1036 67 0 0 chrUextra 16285096 16285245 -12719411 + TAHRE LINE telomeric 10303 10451 -12 9 709 1920 185 79 44 chrUextra 16285244 16285786 -12718870 + TAHRE LINE telomeric 7044 7604 -2859 9 709 4768 33 0 2 chrUextra 16285900 16286506 -12718150 + NINJA_I LTR Pao 5407 6011 0 9 709 674 21 0 69 chrUextra 16286506 16286607 -12718049 + NINJA_LTR LTR Pao 1 94 -223 9 709 5670 0 1 0 chrUextra 16286707 16287353 -12717303 + LSU-rRNA_Dme rRNA rRNA 3254 3900 0 9 709 5042 7 0 0 chrUextra 16287514 16288117 -12716539 - DM176_I LTR Gypsy -617 5803 5201 9 709 791 10 0 0 chrUextra 16288113 16288217 -12716439 - DM176_I LTR Gypsy -5167 1253 1150 9 709 3142 0 0 0 chrUextra 16288321 16288677 -12715979 + ROO_LTR LTR Pao 73 428 0 9 709 318 71 0 0 chrUextra 16288967 16289009 -12715647 + DNAREP1_DM LINE Penelope 1 42 -552 9 709 5408 51 1 0 chrUextra 16289935 16290642 -12714014 - IDEFIX_I LTR Gypsy -2768 2860 2153 9 709 3101 173 16 6 chrUextra 16290742 16291435 -12713221 - SAR_DM Satellite Satellite -447 1025 326 9 709 6035 10 3 0 chrUextra 16291549 16292256 -12712400 - Copia2_I LTR Copia -1750 2412 1704 9 709 34 24 0 0 chrUextra 16292712 16292753 -12711903 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 21 95 0 0 chrUextra 16292966 16293029 -12711627 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 725 332 39 23 chrUextra 16293203 16293773 -12710883 - MICROPIA_I LTR Gypsy -2991 1485 907 9 709 6035 1 1 4 chrUextra 16293970 16294677 -12709979 + LSU-rRNA_Dme rRNA rRNA 825 1529 -2371 9 709 480 121 36 0 chrUextra 16294777 16294860 -12709796 - NTS_DM Other Other -151 89 4 9 709 1301 6 0 18 chrUextra 16294972 16295137 -12709519 - NTS_DM Other Other -78 162 1 9 709 1836 4 12 17 chrUextra 16295137 16295378 -12709278 - NTS_DM Other Other 0 240 1 9 709 688 10 38 28 chrUextra 16295378 16295484 -12709172 - NTS_DM Other Other 0 240 134 9 709 2326 187 58 19 chrUextra 16295588 16296288 -12708368 + SAR_DM Satellite Satellite 1 727 -208 9 709 811 126 0 53 chrUextra 16296460 16296611 -12708045 - DM176_I LTR Gypsy 0 6420 6278 9 709 1019 146 0 5 chrUextra 16296610 16296803 -12707853 - DM297_I LTR Gypsy -486 5681 5490 9 709 1202 190 3 7 chrUextra 16296801 16297098 -12707558 - DM297_I LTR Gypsy -1433 4734 4439 9 709 5644 31 0 0 chrUextra 16297203 16297905 -12706751 - R1_DM LINE R1 -2043 3313 2612 9 709 3114 116 137 3 chrUextra 16298005 16298712 -12705944 - BATUMI_I LTR Pao -3304 4610 3733 9 709 5721 30 0 0 chrUextra 16298812 16299519 -12705137 + R1_DM LINE R1 2840 3546 -1810 9 709 2327 98 7 32 chrUextra 16299619 16300326 -12704330 - DMSAT6 Satellite Satellite -135 689 1 9 709 2991 184 10 8 chrUextra 16300431 16301133 -12703523 - SAR_DM Satellite Satellite -514 958 256 9 709 3509 203 24 35 chrUextra 16301233 16302746 -12701910 + SAR_DM Satellite Satellite 1 1495 -208 9 709 5984 6 0 1 chrUextra 16302847 16303554 -12701102 - DM176_I LTR Gypsy -5129 1291 586 9 709 1462 0 6 0 chrUextra 16303654 16303824 -12700832 + LSU-rRNA_Dme rRNA rRNA 2354 2524 -1376 9 709 4724 2 0 0 chrUextra 16303823 16304361 -12700295 + R2_DM LINE R2 1260 1797 -1810 9 709 3173 258 26 28 chrUextra 16304461 16305971 -12698685 + SAR_DM Satellite Satellite 1 1507 -354 9 709 246 150 0 0 chrUextra 16306129 16306169 -12698487 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 709 22 56 0 0 chrUextra 16306174 16306210 -12698446 + AT_rich Low_complexity Low_complexity 1 36 0 9 709 4336 0 2 2 chrUextra 16306282 16306782 -12697874 - LSU-rRNA_Dme rRNA rRNA 0 3900 3401 9 709 5702 8 55 1 chrUextra 16306884 16307589 -12697067 - DOC LINE Jockey -24 4701 3959 9 709 5792 21 1 3 chrUextra 16307689 16308396 -12696260 + R1_DM LINE R1 3153 3858 -1498 9 709 1288 0 27 16 chrUextra 16309303 16309486 -12695170 + NTS_DM Other Other 56 240 0 9 709 1843 4 17 13 chrUextra 16309486 16309725 -12694931 + NTS_DM Other Other 1 240 0 9 709 1847 4 17 13 chrUextra 16309725 16309964 -12694692 + NTS_DM Other Other 1 240 0 9 709 400 0 0 0 chrUextra 16309964 16310010 -12694646 + NTS_DM Other Other 1 46 -194 9 709 2596 78 0 0 chrUextra 16310119 16310480 -12694176 + BEL_LTR LTR Pao 1 361 0 9 709 1078 75 0 0 chrUextra 16310485 16310627 -12694029 + BEL_I LTR Pao 2 143 -5261 9 709 1674 0 0 0 chrUextra 16310627 16310817 -12693839 - ROO_LTR LTR Pao 0 428 239 9 709 511 191 0 22 chrUextra 16310919 16311058 -12693598 - ARS406_DM Unknown Unknown -217 136 1 9 709 2756 182 20 11 chrUextra 16310969 16311624 -12693032 + SAR_DM Satellite Satellite 201 861 -611 9 709 2781 200 14 9 chrUextra 16311725 16312425 -12692231 - SAR_DM Satellite Satellite -543 929 226 9 709 701 142 0 0 chrUextra 16312531 16312651 -12692005 - DM297_I LTR Gypsy -3505 2662 2543 9 709 1751 137 31 9 chrUextra 16312659 16312976 -12691680 - DMRT1C LINE R1 -154 5289 4966 9 709 630 99 0 0 chrUextra 16312974 16313065 -12691591 - DMRT1C LINE R1 -701 4742 4652 9 709 1310 0 0 0 chrUextra 16313078 16313236 -12691420 + ACCORD2_I LTR Gypsy 47 204 -7008 9 709 5690 13 1 0 chrUextra 16313338 16314045 -12690611 + DM176_I LTR Gypsy 1160 1867 -4553 9 709 847 172 15 5 chrUextra 16314147 16314541 -12690115 - ROVER-I_DM LTR Gypsy -156 6428 5992 9 709 1426 145 7 0 chrUextra 16314578 16314847 -12689809 - ROVER-I_DM LTR Gypsy -1276 5308 5038 9 709 1930 0 0 0 chrUextra 16314975 16315197 -12689459 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 709 34 24 0 0 chrUextra 16315485 16315526 -12689130 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 2908 179 12 10 chrUextra 16315779 16316466 -12688190 + SAR_DM Satellite Satellite 326 1013 -459 9 709 6102 0 0 0 chrUextra 16316566 16317273 -12687383 + ROO_I LTR Pao 1376 2082 -6174 9 709 1491 36 0 0 chrUextra 16317629 16317850 -12686806 + (TCTTG)n Simple_repeat Simple_repeat 1 221 0 9 709 3131 168 14 8 chrUextra 16318180 16318883 -12685773 - SAR_DM Satellite Satellite -445 1027 321 9 709 6156 1 0 0 chrUextra 16318987 16319694 -12684962 + FW_DM LINE Jockey 3246 3952 -740 9 709 1364 0 0 6 chrUextra 16319794 16319955 -12684701 + HOBO DNA hAT 2857 3016 0 9 709 4580 4 0 0 chrUextra 16319955 16320501 -12684155 - ROO_I LTR Pao -1184 7072 6527 9 709 403 74 49 0 chrUextra 16320601 16320682 -12683974 - PROTOP DNA P -3748 732 648 9 709 4321 25 2 0 chrUextra 16320689 16321220 -12683436 - PROTOP DNA P -3949 531 1 9 709 492 123 0 0 chrUextra 16321220 16321301 -12683355 - DNAREP1_DM LINE Penelope -20 574 494 9 709 6115 3 1 0 chrUextra 16321408 16322115 -12682541 + FW_DM LINE Jockey 3414 4121 -571 9 709 6109 6 0 1 chrUextra 16322215 16322922 -12681734 - SSU-rRNA_Dme rRNA rRNA -1216 779 74 9 709 5891 6 1 4 chrUextra 16323841 16324536 -12680120 - SSU-rRNA_Dme rRNA rRNA -254 1741 1049 9 709 5601 0 0 37 chrUextra 16324636 16325343 -12679313 - LSU-rRNA_Dme rRNA rRNA -3072 828 148 9 709 2718 183 8 23 chrUextra 16325444 16326150 -12678506 + SAR_DM Satellite Satellite 1 695 -354 9 709 5480 10 6 16 chrUextra 16326250 16326957 -12677699 - PROTOP_A DNA P -243 862 163 9 709 2987 181 7 7 chrUextra 16327057 16327741 -12676915 - SAR_DM Satellite Satellite -594 878 195 9 709 693 112 0 0 chrUextra 16327648 16327764 -12676892 + ARS406_DM Unknown Unknown 1 116 -237 9 709 3136 173 10 10 chrUextra 16327864 16328570 -12676086 + SAR_DM Satellite Satellite 342 1047 -425 9 709 21 89 0 0 chrUextra 16328901 16328957 -12675699 + AT_rich Low_complexity Low_complexity 1 56 0 9 709 3497 2 2 0 chrUextra 16328976 16329378 -12675278 - SSU-rRNA_Dme rRNA rRNA 0 1995 1593 9 709 5099 60 7 4 chrUextra 16329478 16330185 -12674471 - TRANSIB2 DNA Transib -1910 934 226 9 709 3261 161 14 13 chrUextra 16330289 16330992 -12673664 - SAR_DM Satellite Satellite -435 1037 334 9 709 2869 34 0 0 chrUextra 16331092 16331449 -12673207 - R1_DM LINE R1 -3093 2263 1907 9 709 2738 41 0 0 chrUextra 16331436 16331781 -12672875 - R1_DM LINE R1 -3695 1661 1317 9 709 288 152 0 0 chrUextra 16331906 16331965 -12672691 - BS LINE Jockey -3047 2079 2021 9 709 1193 103 0 118 chrUextra 16332126 16332380 -12672276 + DIVER_LTR LTR Pao 1 224 0 9 709 1670 20 5 5 chrUextra 16332401 16332606 -12672050 + DIVER_I LTR Pao 1 205 -5438 9 709 387 204 0 11 chrUextra 16332714 16332808 -12671848 - HETA LINE telomeric -376 5705 5613 9 709 2739 177 12 10 chrUextra 16332812 16333325 -12671331 - TAHRE LINE telomeric -19 10444 9931 9 709 4694 19 1 9 chrUextra 16333513 16334220 -12670436 - DOC LINE Jockey -1646 3079 2299 9 709 2516 16 0 93 chrUextra 16335936 16336279 -12668377 - CIRCE LINE Composite -4741 1615 1305 9 709 650 354 25 32 chrUextra 16336122 16336563 -12668093 - Gypsy12_I LTR Gypsy -2177 3369 2932 9 709 2033 59 0 88 chrUextra 16336345 16336641 -12668015 - CIRCE LINE Composite -5064 1292 1023 9 709 1853 172 7 13 chrUextra 16336742 16337444 -12667212 + SAR_DM Satellite Satellite 1 698 -558 9 709 340 26 0 0 chrUextra 16337409 16337448 -12667208 - ARS406_DM Unknown Unknown -166 187 149 9 709 1500 18 18 0 chrUextra 16337548 16337719 -12666937 + Gypsy4_I LTR Gypsy 2516 2689 -3599 9 709 4795 25 0 4 chrUextra 16337704 16338255 -12666401 + Gypsy4_I LTR Gypsy 3200 3748 -2540 9 709 6480 1 1 3 chrUextra 16339162 16339868 -12664788 - SSU-rRNA_Dme rRNA rRNA -636 1359 655 9 709 6444 0 0 0 chrUextra 16339968 16340674 -12663982 + DM176_I LTR Gypsy 3415 4120 -2300 9 709 6494 3 0 1 chrUextra 16340774 16341480 -12663176 + R1_DM LINE R1 1686 2390 -2966 9 709 6200 8 0 0 chrUextra 16341580 16342286 -12662370 + DM176_I LTR Gypsy 1524 2229 -4191 9 709 6028 40 0 0 chrUextra 16342386 16343092 -12661564 - R1_DM LINE R1 -3476 1880 1175 9 709 1949 261 39 39 chrUextra 16343205 16343898 -12660758 + ROVER-I_DM LTR Gypsy 1338 2030 -4554 9 709 5883 31 2 1 chrUextra 16343998 16344704 -12659952 + Gypsy2_I LTR Gypsy 3459 4094 -2041 9 709 5299 39 3 2 chrUextra 16344804 16345447 -12659209 - R1_DM LINE R1 -4083 1273 630 9 709 374 78 0 0 chrUextra 16345459 16345510 -12659146 - R1_DM LINE R1 -5288 68 18 9 709 6040 6 8 1 chrUextra 16345610 16346316 -12658340 + QUASIMODO_I LTR Gypsy 4255 4965 -1095 9 709 6477 1 3 0 chrUextra 16346416 16347122 -12657534 - R1_DM LINE R1 -3193 2163 1456 9 709 3446 18 9 11 chrUextra 16347222 16347664 -12656992 + STALKER4_I LTR Gypsy 6090 6530 0 9 709 2412 8 0 0 chrUextra 16347664 16347928 -12656728 + STALKER4_LTR LTR Gypsy 1 264 -138 9 709 4594 37 0 18 chrUextra 16348028 16348582 -12656074 + BATUMI_I LTR Pao 4657 5200 -2763 9 709 957 90 18 0 chrUextra 16348584 16348731 -12655925 + BATUMI_I LTR Pao 6302 6420 -1543 9 709 2242 30 57 0 chrUextra 16348834 16349097 -12655559 - PROTOP DNA P -4202 278 1 9 709 246 0 0 32 chrUextra 16349640 16349671 -12654985 - NTS_DM Other Other -173 67 38 9 709 928 9 0 27 chrUextra 16349671 16349783 -12654873 - NTS_DM Other Other -107 133 25 9 709 1332 18 0 6 chrUextra 16349835 16350000 -12654656 - NTS_DM Other Other -39 201 38 9 709 928 9 0 27 chrUextra 16350000 16350112 -12654544 - NTS_DM Other Other -107 133 25 9 709 1321 24 0 6 chrUextra 16350164 16350329 -12654327 - NTS_DM Other Other -39 201 38 9 709 1678 54 8 29 chrUextra 16350449 16350695 -12653961 - HETRP_DM Satellite Satellite -1619 253 13 9 709 2287 63 43 35 chrUextra 16350807 16351152 -12653504 - HETRP_DM Satellite Satellite -916 956 609 9 709 3277 169 20 14 chrUextra 16352058 16352764 -12651892 + SAR_DM Satellite Satellite 180 889 -583 9 709 937 45 0 0 chrUextra 16352864 16352975 -12651681 - PROTOP_B DNA P -969 184 74 9 709 3354 170 10 11 chrUextra 16353675 16354376 -12650280 - SAR_DM Satellite Satellite -514 958 259 9 709 418 20 20 0 chrUextra 16354476 16354527 -12650129 - Copia2_I LTR Copia -585 3577 3526 9 709 1565 0 0 0 chrUextra 16354881 16355051 -12649605 - Copia2_LTR_DM LTR Copia 0 198 29 9 709 1214 0 0 0 chrUextra 16355051 16355182 -12649474 - Invader1_LTR LTR Gypsy 0 423 293 9 709 6370 0 0 1 chrUextra 16356088 16356794 -12647862 + ROO_I LTR Pao 4156 4860 -3396 9 709 3179 58 105 0 chrUextra 16356903 16357332 -12647324 + TART LINE telomeric 2045 2518 -11959 9 709 2302 23 8 0 chrUextra 16357335 16357600 -12647056 + PROTOP_A DNA P 1 267 -838 9 709 6492 0 0 0 chrUextra 16357700 16358406 -12646250 + FW_DM LINE Jockey 2227 2932 -1760 9 709 6478 0 3 0 chrUextra 16358506 16359212 -12645444 + R1_DM LINE R1 1354 2061 -3295 9 709 1429 6 22 16 chrUextra 16359312 16359497 -12645159 + NTS_DM Other Other 55 240 0 9 709 1972 4 17 13 chrUextra 16359497 16359736 -12644920 + NTS_DM Other Other 1 240 0 9 709 1841 21 17 17 chrUextra 16359736 16359976 -12644680 + NTS_DM Other Other 1 240 0 9 709 375 24 0 0 chrUextra 16359976 16360018 -12644638 + NTS_DM Other Other 1 42 -198 9 709 643 117 166 14 chrUextra 16360164 16360303 -12644353 - DNAREP1_DM LINE Penelope -209 385 226 9 709 267 267 57 98 chrUextra 16360354 16360761 -12643895 + I_DM LINE I 3503 3892 -2339 9 709 3655 30 85 3 chrUextra 16360924 16361630 -12643026 - R1_DM LINE R1 -35 5321 4558 9 709 22 35 0 0 chrUextra 16362034 16362063 -12642593 + AT_rich Low_complexity Low_complexity 1 29 0 9 709 2017 287 17 13 chrUextra 16362549 16363241 -12641415 - ROVER-I_DM LTR Gypsy -2237 4347 3653 9 709 847 102 0 0 chrUextra 16363342 16363470 -12641186 - ARS406_DM Unknown Unknown -225 128 1 9 709 3199 173 10 10 chrUextra 16363364 16364042 -12640614 + SAR_DM Satellite Satellite 180 857 -615 9 709 358 61 20 0 chrUextra 16363999 16364048 -12640608 - ARS406_DM Unknown Unknown -164 189 140 9 709 2506 124 11 16 chrUextra 16364151 16364854 -12639802 - DMSAT6 Satellite Satellite -3 699 1 9 709 4420 6 39 0 chrUextra 16364955 16365466 -12639190 + IDEFIX_LTR LTR Gypsy 64 594 0 9 709 3986 133 16 9 chrUextra 16365764 16366447 -12638209 - TART LINE telomeric -4840 9637 8950 9 709 1039 0 0 0 chrUextra 16366566 16366680 -12637976 - DM1731_LTR LTR Copia -222 114 1 9 709 21 0 0 0 chrUextra 16366695 16366716 -12637940 + AT_rich Low_complexity Low_complexity 1 21 0 9 709 312 83 0 59 chrUextra 16366718 16366769 -12637887 - PROTOP_B DNA P -1094 59 12 9 709 6559 0 0 0 chrUextra 16367373 16368078 -12636578 - DOC LINE Jockey -1952 2773 2069 9 709 3232 180 8 8 chrUextra 16368179 16368850 -12635806 - SAR_DM Satellite Satellite -610 862 192 9 709 925 85 0 0 chrUextra 16368754 16368884 -12635772 + ARS406_DM Unknown Unknown 1 130 -223 9 709 34 24 0 0 chrUextra 16369191 16369232 -12635424 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 21 95 0 0 chrUextra 16369445 16369508 -12635148 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 1562 6 0 0 chrUextra 16369520 16369690 -12634966 + LSU-rRNA_Dme rRNA rRNA 1 170 -3730 9 709 2839 3 6 9 chrUextra 16370596 16370924 -12633732 + LSU-rRNA_Dme rRNA rRNA 1465 1791 -2109 9 709 3177 0 0 0 chrUextra 16370965 16371302 -12633354 + LSU-rRNA_Dme rRNA rRNA 1788 2124 -1776 9 709 1986 0 17 13 chrUextra 16371426 16371665 -12632991 + NTS_DM Other Other 1 240 0 9 709 1140 16 0 0 chrUextra 16371665 16371793 -12632863 + NTS_DM Other Other 1 128 -112 9 709 2844 10 0 6 chrUextra 16371792 16372108 -12632548 + R2_DM LINE R2 1 314 -3293 9 709 3273 179 13 9 chrUextra 16372217 16372914 -12631742 - SAR_DM Satellite Satellite -535 937 238 9 709 866 278 0 33 chrUextra 16373018 16373260 -12631396 - Gypsy3_I LTR Gypsy -3913 2264 2031 9 709 456 198 0 11 chrUextra 16373633 16373720 -12630936 - Gypsy3_I LTR Gypsy -4643 1534 1449 9 709 6540 0 3 1 chrUextra 16373820 16374526 -12630130 - SSU-rRNA_Dme rRNA rRNA -48 1947 1241 9 709 6549 0 0 1 chrUextra 16374626 16375332 -12629324 - MAX_I LTR Pao -4204 3710 3006 9 709 2211 237 118 34 chrUextra 16375434 16376138 -12628518 + Gypsy6_I LTR Gypsy 5151 5913 -1099 9 709 2542 104 18 25 chrUextra 16376238 16376910 -12627746 + DMSAT6 Satellite Satellite 1 666 -233 9 709 6022 27 0 0 chrUextra 16377044 16377742 -12626914 + Gypsy4_I LTR Gypsy 933 1630 -4658 9 709 1615 190 52 18 chrUextra 16377850 16378556 -12626100 + SAR_DM Satellite Satellite 1 730 -208 9 709 6184 23 0 0 chrUextra 16378662 16379362 -12625294 + R1_DM LINE R1 1626 2325 -3031 9 709 28 48 0 0 chrUextra 16379631 16379673 -12624983 + AT_rich Low_complexity Low_complexity 1 42 0 9 709 531 129 24 0 chrUextra 16379946 16380031 -12624625 - NTS_DM Other Other -150 90 4 9 709 5612 1 4 69 chrUextra 16380268 16380974 -12623682 + LSU-rRNA_Dme rRNA rRNA 1274 1933 -1967 9 709 6520 3 1 0 chrUextra 16381074 16381780 -12622876 + DOC LINE Jockey 3152 3858 -867 9 709 34 24 0 0 chrUextra 16382995 16383036 -12621620 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 21 95 0 0 chrUextra 16383249 16383312 -12621344 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 628 0 0 0 chrUextra 16383324 16383392 -12621264 + LSU-rRNA_Dme rRNA rRNA 1 68 -3832 9 88 6546 4 0 0 chrUextra 16383492 16384194 -12620462 - SSU-rRNA_Dme rRNA rRNA -1293 702 1 9 710 5677 43 13 10 chrUextra 16384298 16385004 -12619652 + CIRCE LINE Composite 2987 3694 -2662 9 710 5360 50 61 0 chrUextra 16385105 16385810 -12618846 + IDEFIX_I LTR Gypsy 2082 2829 -2799 9 710 6053 20 7 8 chrUextra 16386716 16387422 -12617234 + FW_DM LINE Jockey 3779 4483 -209 9 710 6438 6 0 0 chrUextra 16387522 16388228 -12616428 - DMRT1B LINE R1 -180 5003 4298 9 710 6621 0 0 0 chrUextra 16388328 16389034 -12615622 - BS2 LINE Jockey -86 4635 3930 9 710 6071 1 0 0 chrUextra 16389134 16389840 -12614816 - R1_DM LINE R1 -3484 1872 1167 9 710 246 150 0 0 chrUextra 16390110 16390150 -12614506 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 710 22 56 0 0 chrUextra 16390155 16390191 -12614465 + AT_rich Low_complexity Low_complexity 1 36 0 9 710 3364 0 0 0 chrUextra 16390263 16390646 -12614010 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 9 710 2756 199 80 13 chrUextra 16390747 16391449 -12613207 - TAHRE LINE telomeric -122 10341 9593 9 710 5557 0 3 0 chrUextra 16391552 16392258 -12612398 + DM176_I LTR Gypsy 5648 6355 -65 9 710 6064 3 0 0 chrUextra 16392358 16393064 -12611592 - FW_DM LINE Jockey -3185 1507 802 9 710 6026 14 0 0 chrUextra 16393165 16393870 -12610786 + Invader1_I LTR Gypsy 55 759 -2427 9 710 5886 11 0 0 chrUextra 16393970 16394676 -12609980 + IDEFIX_I LTR Gypsy 903 1608 -4020 9 710 3094 16 3 0 chrUextra 16394776 16395148 -12609508 - DIVER2_I LTR Pao -32 4115 3743 9 710 1526 29 0 99 chrUextra 16395146 16395379 -12609277 - DIVER2_I LTR Pao -2572 1575 1366 9 710 5040 23 11 50 chrUextra 16395591 16396288 -12608368 - BATUMI_I LTR Pao -5196 2767 2098 9 710 5908 17 1 0 chrUextra 16396388 16397094 -12607562 - R1_DM LINE R1 -2944 2412 1706 9 710 4538 11 4 0 chrUextra 16397194 16397735 -12606921 + DMRT1A LINE R1 4232 4774 -409 9 710 195 69 0 0 chrUextra 16397743 16397772 -12606884 + (A)n Simple_repeat Simple_repeat 1 29 0 9 710 1119 8 0 0 chrUextra 16397772 16397900 -12606756 + (CACAA)n Simple_repeat Simple_repeat 2 129 0 9 710 1571 169 42 9 chrUextra 16398001 16398672 -12605984 + SAR_DM Satellite Satellite 1 693 -677 9 710 2224 194 25 78 chrUextra 16398806 16399511 -12605145 - TART_B1 LINE telomeric -9089 1565 898 9 710 294 333 13 6 chrUextra 16399612 16399769 -12604887 - BLASTOPIA_I LTR Gypsy -783 3698 3541 9 710 343 289 18 25 chrUextra 16400106 16400269 -12604387 - MDG3_I LTR Gypsy -1562 3424 3263 9 710 23 33 0 0 chrUextra 16401080 16401110 -12603546 + AT_rich Low_complexity Low_complexity 1 30 0 9 710 2796 180 10 22 chrUextra 16402030 16402718 -12601938 + SAR_DM Satellite Satellite 440 1119 -353 9 710 343 206 10 19 chrUextra 16402632 16402736 -12601920 - XDMR_DM Unknown Unknown 0 360 258 9 710 2243 7 0 0 chrUextra 16402836 16403108 -12601548 + G2_DM LINE Jockey 2831 3102 0 9 710 3188 19 9 2 chrUextra 16403109 16403542 -12601114 - STALKER4_I LTR Gypsy -67 6463 6028 9 710 508 29 0 0 chrUextra 16403642 16403710 -12600946 + NTS_DM Other Other 66 133 -107 9 710 1252 18 0 6 chrUextra 16403710 16403875 -12600781 + NTS_DM Other Other 38 201 -39 9 710 21 57 0 0 chrUextra 16403875 16403910 -12600746 + AT_rich Low_complexity Low_complexity 1 35 0 9 710 832 9 9 27 chrUextra 16403936 16404047 -12600609 + NTS_DM Other Other 25 133 -107 9 710 817 0 0 0 chrUextra 16404047 16404143 -12600513 + NTS_DM Other Other 38 133 -107 9 710 1408 20 20 20 chrUextra 16404143 16404346 -12600310 + NTS_DM Other Other 38 240 0 9 710 6036 0 3 3 chrUextra 16404450 16405154 -12599502 - SSU-rRNA_Dme rRNA rRNA -454 1541 838 9 710 5079 69 0 0 chrUextra 16405260 16405960 -12598696 + STALKER4_I LTR Gypsy 5109 5808 -722 9 710 637 14 0 0 chrUextra 16406060 16406134 -12598522 - NTS_DM Other Other -166 74 1 9 710 1438 15 20 20 chrUextra 16406134 16406337 -12598319 - NTS_DM Other Other 0 240 38 9 710 870 9 0 27 chrUextra 16406337 16406449 -12598207 - NTS_DM Other Other -107 133 25 9 710 1234 24 0 6 chrUextra 16406501 16406666 -12597990 - NTS_DM Other Other -39 201 38 9 710 774 40 0 0 chrUextra 16406666 16406766 -12597890 - NTS_DM Other Other -107 133 34 9 710 1060 0 0 0 chrUextra 16406866 16406989 -12597667 - NTS_DM Other Other -117 123 1 9 710 1811 13 17 13 chrUextra 16406989 16407228 -12597428 - NTS_DM Other Other 0 240 1 9 710 1756 17 17 17 chrUextra 16407228 16407468 -12597188 - NTS_DM Other Other 0 240 1 9 710 597 30 39 39 chrUextra 16407468 16407572 -12597084 - NTS_DM Other Other 0 240 137 9 710 47 0 0 0 chrUextra 16408011 16408058 -12596598 + AT_rich Low_complexity Low_complexity 1 47 0 9 710 1779 15 0 68 chrUextra 16408074 16408354 -12596302 - Gypsy4_I LTR Gypsy -5911 377 117 9 710 5733 8 8 0 chrUextra 16409284 16409990 -12594666 + QUASIMODO_I LTR Gypsy 3779 4490 -1570 9 710 6066 1 1 0 chrUextra 16410090 16410796 -12593860 - BARI_DM DNA Tc1 -913 815 109 9 710 1960 167 7 10 chrUextra 16410896 16411308 -12593348 - SAR_DM Satellite Satellite -436 1036 626 9 710 1649 122 71 0 chrUextra 16411308 16411602 -12593054 - MAX_LTR LTR Pao 0 321 7 9 710 973 40 0 0 chrUextra 16411702 16411828 -12592828 - ZAM_I LTR Gypsy -6872 618 493 9 710 2198 11 0 78 chrUextra 16411829 16412136 -12592520 + DM176_LTR LTR Gypsy 1 283 -224 9 710 2020 20 16 0 chrUextra 16412137 16412390 -12592266 + DM176_LTR LTR Gypsy 251 507 0 9 710 5966 10 0 0 chrUextra 16412508 16413214 -12591442 - Gypsy4_I LTR Gypsy -461 5827 5122 9 710 3069 183 11 8 chrUextra 16413314 16414019 -12590637 + SAR_DM Satellite Satellite 302 1008 -464 9 710 4655 11 12 0 chrUextra 16414120 16414678 -12589978 - PROTOP_A DNA P -540 565 1 9 710 812 174 0 0 chrUextra 16414678 16414826 -12589830 - TIRANT_I LTR Gypsy -4971 2721 2574 9 710 344 61 20 0 chrUextra 16414926 16414975 -12589681 + ARS406_DM Unknown Unknown 140 189 -164 9 710 2643 158 10 7 chrUextra 16414932 16415632 -12589024 - SAR_DM Satellite Satellite -975 702 1 9 710 5950 1 0 7 chrUextra 16415735 16416438 -12588218 - SSU-rRNA_Dme rRNA rRNA -393 1602 905 9 710 4197 21 4 0 chrUextra 16416538 16417049 -12587607 - PROTOP_A DNA P -592 513 1 9 710 1536 46 0 5 chrUextra 16417049 16417244 -12587412 - PROTOP_A DNA P -31 1074 881 9 710 6136 4 0 0 chrUextra 16417344 16418050 -12586606 - DMRT1A LINE R1 -2575 2608 1903 9 710 4750 8 1 37 chrUextra 16419762 16420468 -12584188 + DM412B_LTR LTR Gypsy 1 571 0 9 710 540 0 0 0 chrUextra 16420569 16420631 -12584025 - BEL_LTR LTR Pao -299 62 1 9 710 5608 0 0 5 chrUextra 16420631 16421274 -12583382 - BEL_I LTR Pao 0 5404 4765 9 710 2471 154 49 11 chrUextra 16421388 16422080 -12582576 + SAR_DM Satellite Satellite 1 718 -493 9 710 6074 0 0 1 chrUextra 16422180 16422886 -12581770 - DM1731_I LTR Copia -1445 2531 1827 9 710 3143 174 10 9 chrUextra 16422991 16423692 -12580964 + SAR_DM Satellite Satellite 321 1022 -450 9 710 3077 176 6 7 chrUextra 16423800 16424491 -12580165 + SAR_DM Satellite Satellite 214 903 -569 9 710 5986 0 0 0 chrUextra 16424598 16425304 -12579352 - MDG3_I LTR Gypsy -799 4187 3482 9 710 6010 6 0 0 chrUextra 16425406 16426110 -12578546 - FW_DM LINE Jockey -852 3840 3137 9 710 3285 46 0 9 chrUextra 16426210 16426646 -12578010 + DMCR1A LINE CR1 3803 4234 -236 9 710 779 88 18 0 chrUextra 16426648 16426762 -12577894 + DMCR1A LINE CR1 4353 4468 -2 9 710 913 66 199 0 chrUextra 16426765 16426916 -12577740 - Transib5 DNA Transib -591 2410 2230 9 710 334 94 0 0 chrUextra 16427016 16427069 -12577587 + DOC5_DM LINE Jockey 3920 3972 -710 9 710 1832 185 4 7 chrUextra 16427826 16428526 -12576130 + SAR_DM Satellite Satellite 1 698 -569 9 710 2976 6 45 0 chrUextra 16428628 16428652 -12576004 - QUASIMODO_I LTR Gypsy -5686 374 351 9 710 218 56 0 27 chrUextra 16428652 16428689 -12575967 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 9 710 2976 6 45 0 chrUextra 16428689 16429022 -12575634 - QUASIMODO_I LTR Gypsy -5710 350 2 9 710 2652 3 0 3 chrUextra 16429022 16429334 -12575322 - QUASIMODO_LTR LTR Gypsy 0 658 348 9 710 6113 0 1 3 chrUextra 16429434 16430140 -12574516 - SSU-rRNA_Dme rRNA rRNA -87 1908 1204 9 710 6078 1 0 0 chrUextra 16431046 16431752 -12572904 + DMRT1A LINE R1 2457 3162 -2021 9 710 697 193 0 7 chrUextra 16432244 16432390 -12572266 + DMLTR5 LTR Gypsy 122 266 0 9 710 351 49 65 16 chrUextra 16432389 16432451 -12572205 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 710 244 128 0 21 chrUextra 16432473 16432521 -12572135 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 710 5897 9 0 7 chrUextra 16432658 16433364 -12571292 + DMRT1B LINE R1 2627 3327 -1856 9 710 2731 179 53 20 chrUextra 16433467 16434164 -12570492 + SAR_DM Satellite Satellite 399 1118 -354 9 710 1142 152 108 17 chrUextra 16434270 16434565 -12570091 + ROVER-I_DM LTR Gypsy 6263 6584 0 9 710 1724 107 58 50 chrUextra 16434565 16434929 -12569727 + ROVER-LTR_DM LTR Gypsy 1 367 0 9 710 265 106 21 0 chrUextra 16434929 16434976 -12569680 + ROVER-I_DM LTR Gypsy 1 48 -6536 9 710 478 286 27 27 chrUextra 16435165 16435463 -12569193 + DM176_I LTR Gypsy 1831 2128 -4292 9 710 1363 12 6 6 chrUextra 16435435 16435603 -12569053 - TLD3 Unknown Unknown -3 169 2 9 710 233 342 0 0 chrUextra 16435581 16435742 -12568914 + ROVER-I_DM LTR Gypsy 2576 2736 -3848 9 710 4363 118 6 1 chrUextra 16436688 16437394 -12567262 - S_DM DNA Tc1 -130 1606 898 9 710 6184 3 0 0 chrUextra 16438300 16439006 -12565650 - SSU-rRNA_Dme rRNA rRNA -1201 794 89 9 710 2133 63 6 36 chrUextra 16439108 16439438 -12565218 - ROO_I LTR Pao -7823 433 114 9 710 2772 29 0 3 chrUextra 16439471 16439812 -12564844 - ROO_LTR LTR Pao 0 428 89 9 710 5595 31 0 0 chrUextra 16439912 16440618 -12564038 + MDG1_I LTR Gypsy 2139 2844 -3752 9 710 5954 1 4 4 chrUextra 16440718 16441424 -12563232 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1035 9 710 5789 23 3 0 chrUextra 16441524 16442230 -12562426 - R1_DM LINE R1 -1542 3814 3107 9 710 3959 169 0 3 chrUextra 16442330 16443036 -12561620 + ROVER-I_DM LTR Gypsy 4312 5015 -1569 9 710 2986 178 9 17 chrUextra 16443136 16443833 -12560823 + SAR_DM Satellite Satellite 421 1111 -361 9 710 314 176 0 26 chrUextra 16443766 16443842 -12560814 - XDMR_DM Unknown Unknown -10 350 277 9 710 3986 11 0 0 chrUextra 16443942 16444408 -12560248 - T412LTR LTR LTR -15 466 1 9 710 2815 6 0 0 chrUextra 16444298 16444648 -12560008 - DM412 LTR Gypsy 0 6897 6548 9 710 2586 12 0 39 chrUextra 16444749 16445082 -12559574 - ROO_I LTR Pao -7936 320 1 9 710 2949 24 54 0 chrUextra 16445082 16445454 -12559202 - ROO_LTR LTR Pao 0 428 37 9 710 6071 1 3 0 chrUextra 16445554 16446260 -12558396 + ROO_I LTR Pao 2172 2879 -5377 9 710 5577 26 0 13 chrUextra 16446360 16447066 -12557590 - FW_DM LINE Jockey -2672 2020 1324 9 710 3016 169 41 16 chrUextra 16447169 16447871 -12556785 + SAR_DM Satellite Satellite 392 1111 -361 9 710 2981 181 10 10 chrUextra 16447975 16448678 -12555978 - SAR_DM Satellite Satellite -514 958 256 9 710 2470 3 0 0 chrUextra 16448778 16449062 -12555594 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 9 710 3654 5 0 0 chrUextra 16449060 16449484 -12555172 - R1_DM LINE R1 0 5356 4933 9 710 21 0 0 0 chrUextra 16449874 16449895 -12554761 + AT_rich Low_complexity Low_complexity 1 21 0 9 710 537 182 81 51 chrUextra 16450017 16450214 -12554442 - DMCR1A LINE CR1 -41 4429 4227 9 710 5894 4 0 1 chrUextra 16450390 16451096 -12553560 + LSU-rRNA_Dme rRNA rRNA 293 997 -2903 9 710 5976 0 1 0 chrUextra 16451196 16451902 -12552754 - ROO_I LTR Pao -3323 4933 4227 9 710 2545 30 0 0 chrUextra 16452002 16452338 -12552318 - Invader2_I LTR Gypsy -4256 336 1 9 710 2286 11 0 0 chrUextra 16452338 16452604 -12552052 - Invader2_LTR LTR Gypsy 0 266 1 9 710 572 160 0 0 chrUextra 16452605 16452705 -12551951 - TV1I LTR Gypsy -3580 2383 2284 9 710 462 304 11 11 chrUextra 16452855 16453067 -12551589 + Gypsy10_I LTR Gypsy 1823 2220 -3058 9 710 1765 217 40 5 chrUextra 16453088 16453509 -12551147 + Gypsy4_I LTR Gypsy 2144 2579 -3709 9 710 2678 82 103 74 chrUextra 16453750 16454301 -12550355 + MAX_I LTR Pao 1 567 -7347 9 710 1041 99 0 0 chrUextra 16454429 16455124 -12549532 + (CAAGA)n Simple_repeat Simple_repeat 1 695 0 9 710 6025 1 1 0 chrUextra 16455226 16455932 -12548724 + R1_DM LINE R1 2824 3530 -1826 9 710 1292 0 0 0 chrUextra 16456032 16456181 -12548475 - LSU-rRNA_Dme rRNA rRNA -3751 149 1 9 710 21 95 0 0 chrUextra 16456193 16456256 -12548400 + AT_rich Low_complexity Low_complexity 1 63 0 9 710 34 24 0 0 chrUextra 16456469 16456510 -12548146 + AT_rich Low_complexity Low_complexity 1 41 0 9 710 3236 172 7 7 chrUextra 16456838 16457540 -12547116 + SAR_DM Satellite Satellite 335 1036 -436 9 710 5997 0 1 1 chrUextra 16457644 16458350 -12546306 + ROO_I LTR Pao 5335 6040 -2216 9 710 220 252 26 26 chrUextra 16458465 16458579 -12546077 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 9 710 1381 266 15 46 chrUextra 16458598 16459145 -12545511 + ROVER-I_DM LTR Gypsy 768 1297 -5287 9 710 3217 179 6 6 chrUextra 16461676 16462378 -12542278 + SAR_DM Satellite Satellite 346 1047 -425 9 710 2284 106 18 15 chrUextra 16462482 16463165 -12541491 - DMSAT6 Satellite Satellite -64 685 1 9 710 2431 110 19 5 chrUextra 16463316 16463992 -12540664 - DMSAT6 Satellite Satellite 0 686 1 9 710 3069 171 11 10 chrUextra 16464092 16464791 -12539865 + SAR_DM Satellite Satellite 377 1076 -396 9 710 2364 167 11 49 chrUextra 16465705 16466374 -12538282 + HETA LINE telomeric 35 677 -5404 9 710 5998 6 1 4 chrUextra 16466510 16467216 -12537440 + SSU-rRNA_Dme rRNA rRNA 963 1666 -329 9 710 6014 4 0 1 chrUextra 16467316 16468022 -12536634 + FW_DM LINE Jockey 383 1087 -3605 9 710 22 0 0 0 chrUextra 16468467 16468489 -12536167 + AT_rich Low_complexity Low_complexity 1 22 0 9 710 5427 7 3 0 chrUextra 16468928 16469634 -12535022 + DM176_I LTR Gypsy 5623 6330 -90 9 710 4558 62 3 3 chrUextra 16469737 16470353 -12534303 - R1_DM LINE R1 -4740 616 1 9 710 425 37 0 0 chrUextra 16470386 16470440 -12534216 - R1_DM LINE R1 0 5356 5303 9 710 2826 176 38 10 chrUextra 16470544 16471237 -12533419 + SAR_DM Satellite Satellite 192 903 -569 9 710 5702 20 20 6 chrUextra 16471346 16472052 -12532604 - FW_DM LINE Jockey -294 4398 3683 9 710 1056 106 24 0 chrUextra 16472958 16473128 -12531528 + TART LINE telomeric 9788 9961 -4516 9 710 2078 149 179 40 chrUextra 16473140 16473664 -12530992 + TART LINE telomeric 10040 10636 -3841 9 710 5804 23 0 0 chrUextra 16474570 16475276 -12529380 + R1_DM LINE R1 2658 3363 -1993 9 710 23 0 0 0 chrUextra 16475853 16475876 -12528780 + AT_rich Low_complexity Low_complexity 1 23 0 9 710 3944 36 0 28 chrUextra 16476375 16476885 -12527771 - Baggins1 LINE LOA 0 5453 4958 9 710 2256 0 0 0 chrUextra 16476988 16477247 -12527409 + LSU-rRNA_Dme rRNA rRNA 3642 3900 0 9 710 22 56 0 0 chrUextra 16477319 16477355 -12527301 + AT_rich Low_complexity Low_complexity 1 36 0 9 710 246 150 0 0 chrUextra 16477360 16477400 -12527256 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 246 150 0 0 chrUextra 16477452 16477492 -12527164 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 246 150 0 0 chrUextra 16477544 16477584 -12527072 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 255 125 0 0 chrUextra 16477627 16477667 -12526989 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 5609 24 4 8 chrUextra 16477794 16478500 -12526156 - BATUMI_I LTR Pao -5375 2588 1886 9 710 979 47 0 0 chrUextra 16479178 16479306 -12525350 + PROTOP_B DNA P 74 201 -952 9 710 1060 150 29 21 chrUextra 16479527 16479765 -12524891 + NTS_DM Other Other 1 240 0 9 710 258 125 21 0 chrUextra 16479765 16479813 -12524843 + NTS_DM Other Other 1 49 -191 9 710 723 119 22 0 chrUextra 16479903 16480037 -12524619 + NTS_DM Other Other 1 137 -103 9 710 277 62 15 15 chrUextra 16480045 16480111 -12524545 + NTS_DM Other Other 108 173 -67 9 710 1370 75 15 0 chrUextra 16480213 16480414 -12524242 - R1_DM LINE R1 -5152 204 1 9 710 3844 17 25 0 chrUextra 16480447 16480918 -12523738 - R1_DM LINE R1 0 5356 4874 9 710 1666 294 31 34 chrUextra 16481019 16481724 -12522932 - MICROPIA_I LTR Gypsy -1065 3411 2709 9 710 3035 180 9 7 chrUextra 16481825 16482518 -12522138 + SAR_DM Satellite Satellite 244 937 -535 9 710 1178 0 0 0 chrUextra 16483436 16483572 -12521084 - ALUII_DM Unknown Unknown -104 136 1 9 710 21 57 0 0 chrUextra 16483572 16483607 -12521049 + AT_rich Low_complexity Low_complexity 1 35 0 9 710 22 35 0 0 chrUextra 16483804 16483833 -12520823 + AT_rich Low_complexity Low_complexity 1 29 0 9 710 37 39 0 0 chrUextra 16483915 16483966 -12520690 + AT_rich Low_complexity Low_complexity 1 51 0 9 710 4418 74 45 15 chrUextra 16484244 16484927 -12519729 - MDG1_I LTR Gypsy -5892 704 1 9 710 5379 41 1 3 chrUextra 16485854 16486560 -12518096 + TC1-2_DM DNA Tc1 84 788 -856 9 710 5593 1 0 0 chrUextra 16486716 16487366 -12517290 + FW_DM LINE Jockey 1 650 -4042 9 710 1744 21 17 17 chrUextra 16487482 16487722 -12516934 - NTS_DM Other Other 0 240 1 9 710 1697 30 17 17 chrUextra 16487722 16487962 -12516694 - NTS_DM Other Other 0 240 1 9 710 1409 34 19 19 chrUextra 16487962 16488172 -12516484 - NTS_DM Other Other 0 240 31 9 710 1060 0 0 0 chrUextra 16488272 16488394 -12516262 - R2_DM LINE R2 -3485 122 1 9 710 5061 3 0 0 chrUextra 16488396 16488978 -12515678 - LSU-rRNA_Dme rRNA rRNA -1324 2576 1995 9 710 5946 16 0 0 chrUextra 16489884 16490588 -12514068 - STALKER4_I LTR Gypsy -1843 4687 3984 9 710 4685 0 0 0 chrUextra 16490688 16491262 -12513394 - ROO_I LTR Pao -51 8205 7632 9 710 1168 0 7 0 chrUextra 16491252 16491393 -12513263 + ROO_I LTR Pao 1947 2088 -6168 9 710 1944 9 0 0 chrUextra 16492298 16492526 -12512130 + R1_DM LINE R1 4686 4913 -443 9 710 4174 2 0 0 chrUextra 16492524 16493003 -12511653 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2177 9 710 2243 11 0 0 chrUextra 16493104 16493366 -12511290 + R1_DM LINE R1 5095 5356 0 9 710 3024 59 5 5 chrUextra 16493399 16493808 -12510848 + R1_DM LINE R1 1 409 -4947 9 710 6065 0 0 0 chrUextra 16493908 16494613 -12510043 - ROO_I LTR Pao -6313 1943 1239 9 710 21 0 0 0 chrUextra 16494897 16494918 -12509738 + AT_rich Low_complexity Low_complexity 1 21 0 9 710 1246 74 18 88 chrUextra 16495018 16495349 -12509307 + ROO_I LTR Pao 258 640 -7616 9 710 294 106 0 0 chrUextra 16495349 16495396 -12509260 + (CAG)n Simple_repeat Simple_repeat 1 47 0 9 710 1500 0 0 0 chrUextra 16495518 16495690 -12508966 - SSU-rRNA_Dme rRNA rRNA -1823 172 1 9 710 32 0 0 0 chrUextra 16495822 16495854 -12508802 + AT_rich Low_complexity Low_complexity 1 32 0 9 710 27 49 0 0 chrUextra 16496182 16496223 -12508433 + AT_rich Low_complexity Low_complexity 1 41 0 9 710 365 286 118 28 chrUextra 16496390 16496852 -12507804 + BURDOCK_I LTR Gypsy 1166 1852 -4008 9 710 997 42 7 47 chrUextra 16496879 16497028 -12507628 - G5A_DM LINE Jockey -3 2838 2696 9 710 3215 169 10 10 chrUextra 16497938 16498638 -12506018 - SAR_DM Satellite Satellite -425 1047 348 9 710 1831 182 2 7 chrUextra 16498738 16499148 -12505508 - SAR_DM Satellite Satellite -569 903 496 9 710 1365 159 4 11 chrUextra 16499163 16499443 -12505213 - SAR_DM Satellite Satellite -569 903 626 9 710 1841 192 9 11 chrUextra 16499544 16499997 -12504659 - SAR_DM Satellite Satellite -514 958 507 9 710 1236 162 12 0 chrUextra 16500000 16500247 -12504409 - SAR_DM Satellite Satellite -610 862 613 9 710 1656 0 0 0 chrUextra 16500348 16500538 -12504118 - ROO_LTR LTR Pao -238 190 1 9 710 297 235 37 15 chrUextra 16500562 16500696 -12503960 + TV1I LTR Gypsy 3998 4134 -1829 9 710 782 240 56 16 chrUextra 16500689 16501011 -12503645 + QUASIMODO_I LTR Gypsy 4257 4591 -1469 9 710 5241 45 8 3 chrUextra 16501153 16501858 -12502798 - R1_DM LINE R1 -4284 1072 364 9 710 413 255 0 0 chrUextra 16501959 16502057 -12502599 + MICROPIA_I LTR Gypsy 3753 3850 -626 9 710 5712 31 0 1 chrUextra 16502763 16503468 -12501188 + MAX_I LTR Pao 1692 2395 -5519 9 710 5791 0 3 0 chrUextra 16503568 16504271 -12500385 + QUASIMODO_I LTR Gypsy 3558 4262 -1798 9 710 3082 187 10 4 chrUextra 16504376 16505074 -12499582 + SAR_DM Satellite Satellite 346 1047 -425 9 710 6113 1 0 0 chrUextra 16505178 16505883 -12498773 - DMRT1B LINE R1 -2763 2420 1716 9 710 394 3 0 164 chrUextra 16506055 16506476 -12498180 + (TATAG)n Simple_repeat Simple_repeat 1 351 0 9 710 1167 85 40 10 chrUextra 16506480 16506682 -12497974 + FB4_DM DNA Tc1 1367 1574 -2515 9 710 3696 0 0 0 chrUextra 16506788 16507208 -12497448 + ROO_LTR LTR Pao 9 428 0 9 710 2450 0 0 3 chrUextra 16507208 16507493 -12497163 + ROO_I LTR Pao 1 284 -7972 9 710 1940 308 3 1 chrUextra 16507605 16508278 -12496378 - Invader1_I LTR Gypsy -1048 2138 1465 9 710 2610 182 19 29 chrUextra 16508398 16509103 -12495553 + SAR_DM Satellite Satellite 1 697 -369 9 710 5783 25 1 0 chrUextra 16510813 16511518 -12493138 - R1_DM LINE R1 -1962 3394 2689 9 710 6169 1 1 0 chrUextra 16511618 16512323 -12492333 - SSU-rRNA_Dme rRNA rRNA -1092 903 198 9 710 415 133 139 17 chrUextra 16512425 16512540 -12492116 - DNAREP1_DM LINE Penelope -291 303 175 9 710 1703 162 61 61 chrUextra 16512638 16513079 -12491577 - DNAREP1_DM LINE Penelope -21 573 133 9 710 257 29 0 0 chrUextra 16513082 16513116 -12491540 - DNAREP1_DM LINE Penelope -35 559 526 9 710 2942 181 14 9 chrUextra 16513228 16513925 -12490731 + SAR_DM Satellite Satellite 195 895 -577 9 710 6130 4 0 0 chrUextra 16514033 16514738 -12489918 + DM1731_I LTR Copia 2653 3357 -619 9 88 5908 13 0 1 chrUextra 16514838 16515543 -12489113 - DMRT1B LINE R1 -410 4773 4070 9 711 5959 6 0 1 chrUextra 16515643 16516348 -12488308 - DMRT1B LINE R1 -2419 2764 2061 9 711 5909 7 1 0 chrUextra 16516448 16517153 -12487503 + STALKER4_I LTR Gypsy 1875 2580 -3950 9 711 479 122 100 0 chrUextra 16517501 16517591 -12487065 + DNAREP1_DM LINE Penelope 496 594 0 9 711 33 25 0 0 chrUextra 16517647 16517687 -12486969 + AT_rich Low_complexity Low_complexity 1 40 0 9 711 2956 181 8 11 chrUextra 16518058 16518763 -12485893 + SAR_DM Satellite Satellite 209 911 -561 9 711 5717 16 6 3 chrUextra 16518863 16519568 -12485088 - R1_DM LINE R1 -1160 4196 3490 9 711 2175 39 3 3 chrUextra 16520851 16521157 -12483499 - ROO_I LTR Pao -7110 1146 841 9 711 6169 3 0 0 chrUextra 16521278 16521981 -12482675 - SSU-rRNA_Dme rRNA rRNA -1292 703 1 9 711 21 0 0 0 chrUextra 16522757 16522778 -12481878 + AT_rich Low_complexity Low_complexity 1 21 0 9 711 5325 21 61 0 chrUextra 16522888 16523593 -12481063 + DMRT1B LINE R1 1932 2679 -2504 9 711 1943 172 16 35 chrUextra 16523909 16524398 -12480258 + SAR_DM Satellite Satellite 275 754 -718 9 711 1273 19 0 18 chrUextra 16524719 16524884 -12479772 - NTS_DM Other Other -78 162 1 9 711 1674 38 17 17 chrUextra 16524884 16525124 -12479532 - NTS_DM Other Other 0 240 1 9 711 506 13 51 38 chrUextra 16525124 16525203 -12479453 - NTS_DM Other Other 0 240 161 9 711 6023 0 1 6 chrUextra 16525303 16526008 -12478648 + SSU-rRNA_Dme rRNA rRNA 996 1697 -298 9 711 25 75 0 0 chrUextra 16526225 16526278 -12478378 + AT_rich Low_complexity Low_complexity 1 53 0 9 711 24 0 0 0 chrUextra 16526347 16526371 -12478285 + AT_rich Low_complexity Low_complexity 1 24 0 9 711 394 197 0 0 chrUextra 16526645 16526716 -12477940 - HETA LINE telomeric -1478 4603 4533 9 711 1104 0 0 56 chrUextra 16527001 16527144 -12477512 - 5S_DM RNA RNA 0 135 1 9 711 1176 0 0 0 chrUextra 16527385 16527520 -12477136 - 5S_DM RNA RNA 0 135 1 9 711 2062 152 66 24 chrUextra 16527718 16528332 -12476324 + Stalker2_I LTR Gypsy 312 999 -5531 9 711 22 35 0 0 chrUextra 16528608 16528637 -12476019 + AT_rich Low_complexity Low_complexity 1 29 0 9 711 51 31 0 0 chrUextra 16528965 16529030 -12475626 + AT_rich Low_complexity Low_complexity 1 65 0 9 711 655 0 0 0 chrUextra 16529331 16529408 -12475248 + DM297_LTR LTR Gypsy 338 414 0 9 711 5049 8 2 2 chrUextra 16529408 16530033 -12474623 + DM297_I LTR Gypsy 1 625 -5542 9 711 5929 1 0 0 chrUextra 16530133 16530838 -12473818 - ROO_I LTR Pao -6732 1524 820 9 711 4711 24 70 6 chrUextra 16530938 16531643 -12473013 - R1_DM LINE R1 -975 4381 3632 9 711 5324 1 4 65 chrUextra 16531743 16532448 -12472208 - LSU-rRNA_Dme rRNA rRNA -1708 2192 1531 9 711 6069 0 3 3 chrUextra 16532548 16533253 -12471403 - SSU-rRNA_Dme rRNA rRNA -29 1966 1262 9 711 2953 167 39 39 chrUextra 16533353 16534046 -12470610 - Gypsy12_LTR LTR Gypsy -38 2298 1606 9 711 3811 105 21 24 chrUextra 16534158 16534862 -12469794 - TART LINE telomeric -4385 10092 9391 9 711 2796 256 0 0 chrUextra 16534987 16535668 -12468988 + Gypsy6_I LTR Gypsy 2218 2898 -4114 9 711 1548 130 26 13 chrUextra 16535772 16536077 -12468579 - SAR_DM Satellite Satellite -435 1037 729 9 711 344 0 0 161 chrUextra 16536576 16536756 -12467900 + (CATAG)n Simple_repeat Simple_repeat 5 155 0 9 711 275 0 0 153 chrUextra 16537095 16537278 -12467378 + (ACTAG)n Simple_repeat Simple_repeat 4 158 0 9 711 1604 25 0 0 chrUextra 16537610 16537808 -12466848 - NINJA_I LTR Pao -2033 3978 3781 9 711 1797 9 0 0 chrUextra 16537817 16538027 -12466629 - NINJA_I LTR Pao -2363 3648 3439 9 711 475 33 0 0 chrUextra 16538022 16538083 -12466573 - NINJA_I LTR Pao -2790 3221 3161 9 711 5614 4 1 0 chrUextra 16538183 16538888 -12465768 - QUASIMODO_I LTR Gypsy -331 5729 5024 9 711 6180 0 1 0 chrUextra 16538988 16539693 -12464963 - SSU-rRNA_Dme rRNA rRNA -1085 910 205 9 711 5833 11 4 0 chrUextra 16539793 16540498 -12464158 + STALKER4_I LTR Gypsy 1994 2701 -3829 9 711 6164 0 3 0 chrUextra 16542208 16542913 -12461743 + LSU-rRNA_Dme rRNA rRNA 3071 3777 -123 9 711 2431 47 131 0 chrUextra 16543013 16543372 -12461284 - PROTOP DNA P -4074 406 1 9 711 736 11 0 0 chrUextra 16543818 16543907 -12460749 - NTS_DM Other Other -114 126 38 9 711 817 0 0 0 chrUextra 16543907 16544003 -12460653 - NTS_DM Other Other -107 133 38 9 711 802 9 9 36 chrUextra 16544003 16544115 -12460541 - NTS_DM Other Other -107 133 25 9 711 21 57 0 0 chrUextra 16544141 16544176 -12460480 + AT_rich Low_complexity Low_complexity 1 35 0 9 711 1252 18 0 6 chrUextra 16544176 16544341 -12460315 - NTS_DM Other Other -39 201 38 9 711 852 18 0 27 chrUextra 16544341 16544453 -12460203 - NTS_DM Other Other -107 133 25 9 711 21 36 0 0 chrUextra 16544479 16544507 -12460149 + AT_rich Low_complexity Low_complexity 1 28 0 9 711 5895 4 0 0 chrUextra 16544623 16545328 -12459328 - Invader2_I LTR Gypsy -2798 1794 1090 9 711 6169 1 1 0 chrUextra 16545428 16546133 -12458523 - LSU-rRNA_Dme rRNA rRNA -301 3599 2894 9 711 1345 12 0 17 chrUextra 16546234 16546407 -12458249 - STALKER4_LTR LTR Gypsy -157 245 76 9 711 4069 8 8 2 chrUextra 16546402 16546938 -12457718 - STALKER4_I LTR Gypsy -11 6519 5981 9 711 2936 176 13 14 chrUextra 16547843 16548547 -12456109 + SAR_DM Satellite Satellite 304 1006 -466 9 711 1062 190 30 7 chrUextra 16548649 16548919 -12455737 + SAR_DM Satellite Satellite 587 862 -610 9 711 387 94 16 0 chrUextra 16548875 16548939 -12455717 - ARS406_DM Unknown Unknown -167 186 122 9 711 1465 169 92 21 chrUextra 16548931 16549353 -12455303 + SAR_DM Satellite Satellite 205 656 -816 9 711 2784 182 33 20 chrUextra 16549453 16550158 -12454498 + SAR_DM Satellite Satellite 253 966 -506 9 711 346 0 0 0 chrUextra 16550258 16550299 -12454357 + TABOR_I LTR Gypsy 6296 6336 0 9 711 4418 2 0 0 chrUextra 16550297 16550803 -12453853 + TABOR_LTR LTR Gypsy 1 506 0 9 711 188 0 0 159 chrUextra 16550803 16550960 -12453696 + (TTGTG)n Simple_repeat Simple_repeat 4 135 0 9 711 493 302 39 25 chrUextra 16551145 16551427 -12453229 - IDEFIX_I LTR Gypsy -2802 2826 2541 9 711 227 160 51 39 chrUextra 16551505 16551583 -12453073 + (TTTA)n Simple_repeat Simple_repeat 3 81 0 9 711 5815 17 1 6 chrUextra 16551868 16552573 -12452083 + FW_DM LINE Jockey 3483 4184 -508 9 711 1461 116 8 4 chrUextra 16553497 16553740 -12450916 - BS2 LINE Jockey -4464 257 14 9 711 30 27 0 0 chrUextra 16553992 16554029 -12450627 + AT_rich Low_complexity Low_complexity 1 37 0 9 711 192 40 0 0 chrUextra 16554146 16554171 -12450485 + (TAA)n Simple_repeat Simple_repeat 1 25 0 9 711 3378 87 85 72 chrUextra 16554283 16554298 -12450358 - ACCORD2_I LTR Gypsy -236 6976 6960 9 711 185 0 40 0 chrUextra 16554298 16554323 -12450333 + (TTA)n Simple_repeat Simple_repeat 1 26 0 9 711 3378 87 85 72 chrUextra 16554323 16554988 -12449668 - ACCORD2_I LTR Gypsy -253 6959 6287 9 711 369 259 0 0 chrUextra 16555107 16555215 -12449441 + Gypsy7_I LTR Gypsy 1560 1667 -3317 9 711 4278 42 2 13 chrUextra 16555241 16555793 -12448863 - G5A_DM LINE Jockey -3 2838 2293 9 711 1896 112 23 3 chrUextra 16555922 16556271 -12448385 + MDG1_I LTR Gypsy 870 1225 -5371 9 711 2172 71 18 9 chrUextra 16556258 16556598 -12448058 + MDG1_I LTR Gypsy 1131 1473 -5123 9 711 21 89 0 0 chrUextra 16557099 16557155 -12447501 + AT_rich Low_complexity Low_complexity 1 56 0 9 711 2022 0 0 0 chrUextra 16557174 16557403 -12447253 - SSU-rRNA_Dme rRNA rRNA 0 1995 1767 9 711 6037 3 0 1 chrUextra 16557503 16558208 -12446448 - R1_DM LINE R1 -1546 3810 3107 9 711 2803 60 52 0 chrUextra 16558308 16558728 -12445928 - I_DM LINE I -5690 541 100 9 711 1012 15 0 49 chrUextra 16559113 16559257 -12445399 + Invader1_I LTR Gypsy 3050 3186 0 9 711 3623 7 2 0 chrUextra 16559257 16559679 -12444977 + Invader1_LTR LTR Gypsy 1 423 0 9 711 467 217 8 16 chrUextra 16559696 16559818 -12444838 - HETRP_DM Satellite Satellite -203 1669 1549 9 711 247 183 33 0 chrUextra 16560562 16560622 -12444034 + DM297_I LTR Gypsy 2372 2433 -3734 9 711 2172 0 0 0 chrUextra 16560723 16560970 -12443686 - LSU-rRNA_Dme rRNA rRNA -1866 2034 1788 9 711 3485 2 5 2 chrUextra 16561014 16561428 -12443228 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1374 9 711 224 185 31 0 chrUextra 16561942 16562007 -12442649 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 711 5661 27 8 0 chrUextra 16562333 16563038 -12441618 + R1_DM LINE R1 2324 3034 -2322 9 711 6017 1 1 0 chrUextra 16563138 16563843 -12440813 - DM176_I LTR Gypsy -2338 4082 3377 9 711 2953 178 35 10 chrUextra 16563943 16564648 -12440008 + SAR_DM Satellite Satellite 284 1006 -466 9 711 707 115 0 8 chrUextra 16564748 16564871 -12439785 - ARS406_DM Unknown Unknown -231 122 1 9 711 2793 185 10 10 chrUextra 16564777 16565453 -12439203 + SAR_DM Satellite Satellite 195 870 -602 9 711 1344 174 16 11 chrUextra 16566362 16567057 -12437599 + SAR_DM Satellite Satellite 1 697 -645 9 711 1790 19 0 0 chrUextra 16567163 16567376 -12437280 + R1_DM LINE R1 5144 5356 0 9 711 3322 66 4 4 chrUextra 16567409 16567867 -12436789 + R1_DM LINE R1 1 458 -4898 9 711 3073 21 126 0 chrUextra 16568773 16569478 -12435178 - Invader2_I LTR Gypsy -1820 2772 1979 9 711 849 222 237 31 chrUextra 16569582 16570029 -12434627 + TAHRE LINE telomeric 9738 10276 -187 9 711 34 24 0 0 chrUextra 16570038 16570079 -12434577 + AT_rich Low_complexity Low_complexity 1 41 0 9 711 2377 176 41 11 chrUextra 16570383 16571088 -12433568 + SAR_DM Satellite Satellite 1 725 -416 9 711 5630 1 1 0 chrUextra 16571188 16571893 -12432763 - DM176_I LTR Gypsy -201 6219 5514 9 711 1257 31 25 0 chrUextra 16571993 16572151 -12432505 + ACCORD2_I LTR Gypsy 7041 7202 -10 9 711 1777 19 0 18 chrUextra 16572151 16572370 -12432286 + ACCORD2_LTR LTR Gypsy 1 215 0 9 711 2517 16 0 43 chrUextra 16572370 16572698 -12431958 + ACCORD2_I LTR Gypsy 1 314 -6898 9 711 2927 128 36 4 chrUextra 16572798 16573501 -12431155 + DM297_I LTR Gypsy 2773 3521 -2591 9 711 918 9 0 9 chrUextra 16573603 16573716 -12430940 - NTS_DM Other Other -128 112 1 9 711 1836 8 17 13 chrUextra 16573716 16573955 -12430701 - NTS_DM Other Other 0 240 1 9 711 1731 21 17 17 chrUextra 16573955 16574195 -12430461 - NTS_DM Other Other 0 240 1 9 711 742 9 35 26 chrUextra 16574195 16574308 -12430348 - NTS_DM Other Other 0 240 127 9 711 5098 40 0 0 chrUextra 16574408 16575038 -12429618 + BATUMI_I LTR Pao 3692 4321 -3642 9 711 2739 176 21 30 chrUextra 16575214 16575918 -12428738 - SAR_DM Satellite Satellite -313 1159 462 9 711 6155 0 0 0 chrUextra 16576018 16576723 -12427933 + FW_DM LINE Jockey 3411 4115 -577 9 711 1271 6 0 24 chrUextra 16576941 16577107 -12427549 - NTS_DM Other Other -78 162 1 9 711 1847 4 17 13 chrUextra 16577107 16577346 -12427310 - NTS_DM Other Other 0 240 1 9 711 1312 0 22 16 chrUextra 16577346 16577528 -12427128 - NTS_DM Other Other 0 240 58 9 711 5701 19 3 11 chrUextra 16577628 16578333 -12426323 - BATUMI_I LTR Pao -1662 6301 5603 9 711 803 287 31 34 chrUextra 16578433 16578844 -12425812 - Copia2_I LTR Copia -2269 1893 1392 9 711 4650 19 0 2 chrUextra 16579238 16579802 -12424854 + R1_DM LINE R1 1758 2320 -3036 9 711 1116 49 0 0 chrUextra 16579801 16579943 -12424713 + R1_DM LINE R1 2531 2672 -2684 9 711 4747 37 66 0 chrUextra 16580095 16580748 -12423908 + PROTOP DNA P 1 696 -3784 9 711 865 128 5 11 chrUextra 16580981 16581170 -12423486 + S_DM DNA Tc1 1549 1736 0 9 711 392 103 0 0 chrUextra 16581197 16581255 -12423401 - FB4_DM DNA Tc1 -3014 1075 1018 9 711 860 0 0 0 chrUextra 16581653 16581755 -12422901 - ROO_LTR LTR Pao -326 102 1 9 711 4549 23 5 5 chrUextra 16581755 16582358 -12422298 - ROO_I LTR Pao 0 8256 7654 9 711 6115 0 0 1 chrUextra 16582458 16583163 -12421493 + ROO_I LTR Pao 6958 7661 -595 9 711 661 323 40 40 chrUextra 16583281 16583761 -12420895 + TV1I LTR Gypsy 490 969 -4994 9 711 705 245 0 5 chrUextra 16583763 16583968 -12420688 + TV1I LTR Gypsy 3864 4067 -1896 9 711 2970 182 6 9 chrUextra 16584070 16584764 -12419892 + SAR_DM Satellite Satellite 212 903 -569 9 711 2279 104 34 52 chrUextra 16584899 16585578 -12419078 + DMSAT6 Satellite Satellite 1 666 -3 9 711 3142 173 13 7 chrUextra 16585678 16586383 -12418273 + SAR_DM Satellite Satellite 334 1042 -430 9 711 4542 60 14 6 chrUextra 16586564 16587188 -12417468 - R1_DM LINE R1 -3119 2237 1609 9 711 4884 58 12 6 chrUextra 16587329 16587993 -12416663 - R1_DM LINE R1 -3119 2237 1570 9 711 636 82 0 84 chrUextra 16588093 16588212 -12416444 - Gypsy6A_LTR LTR Gypsy -311 109 1 9 711 2181 15 0 0 chrUextra 16588212 16588468 -12416188 - STALKER4_LTR LTR Gypsy -146 256 1 9 711 2297 18 12 9 chrUextra 16588468 16588798 -12415858 - STALKER4_I LTR Gypsy 0 6530 6200 9 711 5488 33 8 3 chrUextra 16588898 16589603 -12415053 + MDG1_I LTR Gypsy 1374 2082 -4514 9 711 1885 170 11 6 chrUextra 16589703 16590397 -12414259 + SAR_DM Satellite Satellite 1 697 -677 9 711 636 76 11 0 chrUextra 16590316 16590408 -12414248 - ARS406_DM Unknown Unknown -164 189 97 9 711 5840 10 1 3 chrUextra 16590508 16591213 -12413443 + R1_DM LINE R1 3315 4018 -1338 9 711 835 0 10 0 chrUextra 16591313 16591412 -12413244 - Invader2_LTR LTR Gypsy -166 100 1 9 711 4422 45 10 0 chrUextra 16591423 16592018 -12412638 + MDG1_I LTR Gypsy 1130 1730 -4866 9 711 2806 87 0 2 chrUextra 16592143 16592546 -12412110 + Jockey2 LINE Jockey 1419 1820 -1608 9 711 632 62 496 3 chrUextra 16592554 16592823 -12411833 - PROTOP_B DNA P -297 856 411 9 711 871 89 0 0 chrUextra 16592923 16593058 -12411598 - ARS406_DM Unknown Unknown -218 135 1 9 711 2981 168 15 7 chrUextra 16592952 16593628 -12411028 + SAR_DM Satellite Satellite 180 860 -612 9 711 900 0 0 0 chrUextra 16594333 16594433 -12410223 + (CACAA)n Simple_repeat Simple_repeat 1 100 0 9 711 3074 113 37 95 chrUextra 16594533 16595238 -12409418 + PROTOP_B DNA P 412 1075 -78 9 711 3198 162 13 13 chrUextra 16595344 16596038 -12408618 - SAR_DM Satellite Satellite -425 1047 354 9 711 5969 3 0 0 chrUextra 16596143 16596848 -12407808 + STALKER4_I LTR Gypsy 4799 5503 -1027 9 711 5914 0 1 0 chrUextra 16596948 16597653 -12407003 + ROO_I LTR Pao 4641 5346 -2910 9 711 292 291 0 0 chrUextra 16598268 16598354 -12406302 - DMRT1C LINE R1 -1183 4260 4175 9 711 328 147 67 0 chrUextra 16598383 16598458 -12406198 + DNAREP1_DM LINE Penelope 182 261 -333 9 711 3036 185 11 6 chrUextra 16598558 16599261 -12405395 - SAR_DM Satellite Satellite -539 933 227 9 711 3161 168 11 10 chrUextra 16599363 16600068 -12404588 + SAR_DM Satellite Satellite 371 1076 -396 9 711 1402 132 57 3 chrUextra 16600550 16600832 -12403824 + DNAREP1_DM LINE Penelope 1 297 -297 9 711 6045 3 0 0 chrUextra 16602583 16603288 -12401368 + R1_DM LINE R1 2757 3461 -1895 9 711 32 0 0 0 chrUextra 16603413 16603445 -12401211 + AT_rich Low_complexity Low_complexity 1 32 0 9 711 28 48 0 0 chrUextra 16603773 16603815 -12400841 + AT_rich Low_complexity Low_complexity 1 42 0 9 711 6185 0 1 0 chrUextra 16604193 16604898 -12399758 - GTWIN_I LTR Gypsy -977 5444 4739 9 711 2275 148 54 10 chrUextra 16604999 16605568 -12399088 + DM176_I LTR Gypsy 4034 4672 -1748 9 711 444 141 67 0 chrUextra 16605568 16605703 -12398953 + CT-rich Low_complexity Low_complexity 1 144 0 9 711 5676 11 38 0 chrUextra 16605803 16606508 -12398148 - DOC2_DM LINE Jockey -1581 3212 2481 9 711 692 12 0 0 chrUextra 16606608 16606689 -12397967 + R1_DM LINE R1 5276 5356 0 9 711 1208 60 6 0 chrUextra 16606722 16606889 -12397767 + R1_DM LINE R1 1 168 -5188 9 711 3293 31 0 2 chrUextra 16606887 16607312 -12397344 + R1_DM LINE R1 638 1061 -4295 9 711 4475 2 2 2 chrUextra 16607413 16607957 -12396699 - ROO_I LTR Pao -6979 1277 734 9 711 552 130 0 0 chrUextra 16607958 16608050 -12396606 + (CTG)n Simple_repeat Simple_repeat 1 92 0 9 711 573 0 0 0 chrUextra 16608050 16608118 -12396538 - ROO_I LTR Pao -7616 640 573 9 711 1434 12 6 0 chrUextra 16608218 16608388 -12396268 + R1_DM LINE R1 5186 5356 0 9 711 3655 70 4 4 chrUextra 16608420 16608923 -12395733 + R1_DM LINE R1 1 503 -4853 9 711 5814 1 0 0 chrUextra 16609023 16609687 -12394969 + LSU-rRNA_Dme rRNA rRNA 1993 2656 -1244 9 711 340 0 0 23 chrUextra 16609685 16609728 -12394928 + R1_DM LINE R1 5294 5335 -21 9 711 5768 7 0 0 chrUextra 16609828 16610533 -12394123 + QUASIMODO_I LTR Gypsy 3472 4176 -1884 9 711 639 177 0 0 chrUextra 16610633 16610763 -12393893 - ARS406_DM Unknown Unknown -223 130 1 9 711 2893 173 12 15 chrUextra 16610666 16611335 -12393321 + SAR_DM Satellite Satellite 191 857 -615 9 711 236 86 0 0 chrUextra 16612243 16612278 -12392378 - PROTOP_B DNA P -1118 35 1 9 711 757 170 6 25 chrUextra 16613124 16613281 -12391375 + HETRP_DM Satellite Satellite 1516 1669 -203 9 711 276 185 250 42 chrUextra 16613439 16613535 -12391121 + HETRP_DM Satellite Satellite 1519 1634 -238 9 711 787 170 6 19 chrUextra 16613583 16613739 -12390917 + HETRP_DM Satellite Satellite 1516 1669 -203 9 711 5936 1 0 3 chrUextra 16613853 16614556 -12390100 - ROO_I LTR Pao -2057 6199 5499 9 711 2604 23 0 6 chrUextra 16614658 16615006 -12389650 + ROO_I LTR Pao 7911 8256 0 9 711 3005 17 3 0 chrUextra 16615006 16615363 -12389293 + ROO_LTR LTR Pao 1 358 -70 9 711 4465 139 0 0 chrUextra 16615463 16616168 -12388488 + HMSBEAGLE_I LTR Gypsy 3282 3986 -2543 9 711 1228 75 0 0 chrUextra 16616268 16616467 -12388189 + S_DM DNA Tc1 1538 1736 0 9 711 937 52 7 0 chrUextra 16616467 16616595 -12388061 + CIRCE LINE Composite 4493 4621 -1735 9 711 1121 49 0 0 chrUextra 16616591 16616734 -12387922 + CIRCE LINE Composite 4838 4980 -1376 9 711 3223 37 48 2 chrUextra 16617073 16617510 -12387146 - Invader2_I LTR Gypsy -1462 3130 2674 9 711 2261 15 0 0 chrUextra 16617511 16617778 -12386878 - DIVER2_LTR LTR Pao -8 377 111 9 711 5023 27 7 50 chrUextra 16617878 16618583 -12386073 + BATUMI_I LTR Pao 2061 2735 -5228 9 711 2361 0 3 3 chrUextra 16618683 16618967 -12385689 - DMRT1B LINE R1 -4339 844 561 9 711 3420 26 2 0 chrUextra 16618971 16619388 -12385268 + R1_DM LINE R1 4583 5000 -356 9 711 5450 16 51 0 chrUextra 16619488 16620191 -12384465 - FW_DM LINE Jockey -375 4317 3579 9 711 2784 179 30 25 chrUextra 16620294 16620997 -12383659 + SAR_DM Satellite Satellite 1 706 -208 9 711 24 0 0 0 chrUextra 16621223 16621247 -12383409 + AT_rich Low_complexity Low_complexity 1 24 0 9 711 291 232 0 0 chrUextra 16621477 16621546 -12383110 - BS2 LINE Jockey -507 4214 4146 9 711 6061 0 0 3 chrUextra 16621903 16622608 -12382048 + FW_DM LINE Jockey 1732 2434 -2258 9 711 2885 171 14 26 chrUextra 16622716 16623413 -12381243 - SAR_DM Satellite Satellite -354 1118 430 9 711 2836 106 40 6 chrUextra 16623514 16623662 -12380994 - R1_DM LINE R1 -4293 1063 897 9 711 243 88 0 0 chrUextra 16623662 16623696 -12380960 + (CGG)n Simple_repeat Simple_repeat 1 34 0 9 711 2836 106 40 6 chrUextra 16623696 16624021 -12380635 - R1_DM LINE R1 -4460 896 574 9 711 970 108 29 29 chrUextra 16624022 16624194 -12380462 - R1_DM LINE R1 -5184 172 1 9 711 339 328 29 30 chrUextra 16624447 16624838 -12379818 + Gypsy3_I LTR Gypsy 1218 1784 -5228 9 711 4613 0 0 0 chrUextra 16625927 16626452 -12378204 + R2_DM LINE R2 3083 3607 0 9 711 1524 11 0 0 chrUextra 16626455 16626631 -12378025 + LSU-rRNA_Dme rRNA rRNA 2578 2753 -1147 9 711 888 0 0 0 chrUextra 16626731 16626832 -12377824 + R1_DM LINE R1 5256 5356 0 9 711 5223 2 0 3 chrUextra 16626830 16627435 -12377221 + LSU-rRNA_Dme rRNA rRNA 2640 3242 -658 9 711 3158 171 9 9 chrUextra 16627555 16628238 -12376418 + SAR_DM Satellite Satellite 326 1008 -464 9 711 246 150 0 0 chrUextra 16628414 16628454 -12376202 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 711 22 56 0 0 chrUextra 16628459 16628495 -12376161 + AT_rich Low_complexity Low_complexity 1 36 0 9 711 4133 0 4 0 chrUextra 16628567 16629043 -12375613 - LSU-rRNA_Dme rRNA rRNA 0 3900 3423 9 711 784 288 64 46 chrUextra 16629144 16629807 -12374849 - TABOR_I LTR Gypsy -3508 3389 2344 9 711 327 167 59 42 chrUextra 16629949 16630068 -12374588 + NTS_DM Other Other 120 240 0 9 711 280 104 21 0 chrUextra 16630068 16630116 -12374540 + NTS_DM Other Other 1 49 -191 9 711 827 144 7 0 chrUextra 16630206 16630359 -12374297 + NTS_DM Other Other 1 154 -86 9 711 659 148 44 28 chrUextra 16630373 16630553 -12374103 + NTS_DM Other Other 58 240 0 9 711 243 125 20 20 chrUextra 16630553 16630602 -12374054 + NTS_DM Other Other 1 49 -191 9 711 2669 176 16 27 chrUextra 16630759 16631430 -12373226 + SAR_DM Satellite Satellite 456 1119 -353 9 711 424 176 9 27 chrUextra 16631344 16631455 -12373201 - XDMR_DM Unknown Unknown 0 360 252 9 711 975 9 0 0 chrUextra 16632147 16632259 -12372397 + (TTGTG)n Simple_repeat Simple_repeat 2 113 0 9 711 1177 66 11 32 chrUextra 16632359 16632548 -12372108 + BATUMI_I LTR Pao 7100 7284 -679 9 711 2638 93 91 33 chrUextra 16632548 16633062 -12371594 + BATUMI_I LTR Pao 1 544 -7419 9 711 3106 155 20 18 chrUextra 16633163 16633847 -12370809 - SAR_DM Satellite Satellite -466 1006 321 9 711 2810 191 19 25 chrUextra 16633969 16634671 -12369985 + SAR_DM Satellite Satellite 1 697 -208 9 711 3011 182 7 10 chrUextra 16634775 16635474 -12369182 - SAR_DM Satellite Satellite -581 891 195 9 711 1350 0 0 0 chrUextra 16636379 16636540 -12368116 - NTS_DM Other Other -79 161 1 9 711 1850 4 17 13 chrUextra 16636540 16636779 -12367877 - NTS_DM Other Other 0 240 1 9 711 1800 13 17 13 chrUextra 16636779 16637018 -12367638 - NTS_DM Other Other 0 240 1 9 711 733 90 25 0 chrUextra 16637183 16637305 -12367351 - ARS406_DM Unknown Unknown -228 125 1 9 711 2735 189 13 9 chrUextra 16637215 16637887 -12366769 + SAR_DM Satellite Satellite 195 869 -603 9 711 2942 0 0 0 chrUextra 16637987 16638326 -12366330 + Copia_I LTR Copia 4255 4593 0 9 711 2219 4 4 4 chrUextra 16638326 16638602 -12366054 + Copia_LTR LTR Copia 1 276 0 9 711 524 23 33 44 chrUextra 16638602 16638691 -12365965 - NTS_DM Other Other -16 224 137 9 711 5950 3 4 3 chrUextra 16638791 16639495 -12365161 - LSU-rRNA_Dme rRNA rRNA -2152 1748 1044 9 711 2491 87 20 24 chrUextra 16639600 16640299 -12364357 + DMSAT6 Satellite Satellite 1 695 -155 9 711 1301 0 0 0 chrUextra 16641203 16641353 -12363303 - LSU-rRNA_Dme rRNA rRNA -3750 150 1 9 711 21 95 0 0 chrUextra 16641365 16641428 -12363228 + AT_rich Low_complexity Low_complexity 1 63 0 9 711 34 24 0 0 chrUextra 16641641 16641682 -12362974 + AT_rich Low_complexity Low_complexity 1 41 0 9 711 3727 0 0 0 chrUextra 16642282 16642711 -12361945 + FW_DM LINE Jockey 560 988 -3704 9 711 1850 4 17 13 chrUextra 16642814 16643053 -12361603 - NTS_DM Other Other 0 240 1 9 711 1850 4 17 13 chrUextra 16643053 16643292 -12361364 - NTS_DM Other Other 0 240 1 9 711 1374 30 20 20 chrUextra 16643292 16643495 -12361161 - NTS_DM Other Other 0 240 38 9 711 5943 1 0 0 chrUextra 16643615 16644319 -12360337 + DM176_I LTR Gypsy 2016 2719 -3701 9 711 493 226 0 0 chrUextra 16644419 16644525 -12360131 + Copia2_I LTR Copia 1002 1107 -3055 9 711 720 51 0 0 chrUextra 16644560 16644658 -12359998 + DOC3_DM LINE Jockey 4614 4711 -29 9 711 3587 24 69 2 chrUextra 16644657 16645123 -12359533 + PROTOP DNA P 49 545 -3935 9 711 6151 0 0 1 chrUextra 16645223 16645927 -12358729 - LSU-rRNA_Dme rRNA rRNA -741 3159 2457 9 88 3154 184 6 6 chrUextra 16646027 16646731 -12357925 - SAR_DM Satellite Satellite -539 933 230 9 712 918 0 0 0 chrUextra 16646831 16646933 -12357723 + (CTATT)n Simple_repeat Simple_repeat 2 103 0 9 712 6000 6 0 0 chrUextra 16647644 16648339 -12356317 + LSU-rRNA_Dme rRNA rRNA 1788 2482 -1418 9 712 235 175 0 0 chrUextra 16648468 16648508 -12356148 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 238 150 0 0 chrUextra 16648560 16648600 -12356056 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 226 175 0 0 chrUextra 16648652 16648692 -12355964 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 246 150 0 0 chrUextra 16648744 16648784 -12355872 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 235 175 0 0 chrUextra 16648836 16648876 -12355780 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 238 150 0 0 chrUextra 16648928 16648968 -12355688 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 5296 35 0 3 chrUextra 16649291 16649947 -12354709 - BATUMI_I LTR Pao -1543 6420 5767 9 712 21 89 0 0 chrUextra 16650371 16650427 -12354229 + AT_rich Low_complexity Low_complexity 1 56 0 9 712 2638 3 3 0 chrUextra 16650446 16650751 -12353905 - SSU-rRNA_Dme rRNA rRNA 0 1995 1690 9 712 6109 1 0 0 chrUextra 16651655 16652359 -12352297 - FW_DM LINE Jockey -328 4364 3661 9 712 5450 33 14 0 chrUextra 16652459 16653163 -12351493 + MDG1_I LTR Gypsy 5016 5729 -867 9 712 2929 186 7 19 chrUextra 16653264 16653967 -12350689 - SAR_DM Satellite Satellite -366 1106 412 9 712 6030 3 1 3 chrUextra 16654067 16654771 -12349885 + SSU-rRNA_Dme rRNA rRNA 779 1481 -514 9 712 1417 39 34 0 chrUextra 16654871 16655079 -12349577 - PROTOP DNA P -2604 1876 1662 9 712 3888 25 2 2 chrUextra 16655088 16655575 -12349081 - PROTOP DNA P -3893 587 101 9 712 5913 8 3 1 chrUextra 16655675 16656379 -12348277 + Invader4_I LTR Gypsy 516 1220 -1193 9 712 562 14 13 39 chrUextra 16656480 16656557 -12348099 - NTS_DM Other Other -141 99 25 9 712 22 56 0 0 chrUextra 16656583 16656619 -12348037 + AT_rich Low_complexity Low_complexity 1 36 0 9 712 255 125 0 0 chrUextra 16656632 16656672 -12347984 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 246 150 0 0 chrUextra 16656808 16656848 -12347808 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 246 150 0 0 chrUextra 16656900 16656940 -12347716 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 22 56 0 0 chrUextra 16656945 16656981 -12347675 + AT_rich Low_complexity Low_complexity 1 36 0 9 712 1142 0 0 0 chrUextra 16657053 16657183 -12347473 - LSU-rRNA_Dme rRNA rRNA 0 3900 3771 9 712 5788 19 1 7 chrUextra 16657283 16657987 -12346669 + BATUMI_I LTR Pao 5693 6392 -1571 9 712 2927 172 11 26 chrUextra 16658894 16659593 -12345063 - SAR_DM Satellite Satellite -359 1113 425 9 712 5812 11 0 0 chrUextra 16660499 16661203 -12343453 - IDEFIX_I LTR Gypsy -4308 1320 617 9 712 5960 3 4 3 chrUextra 16661303 16662007 -12342649 - LSU-rRNA_Dme rRNA rRNA -2152 1748 1044 9 712 34 24 0 0 chrUextra 16662147 16662188 -12342468 + AT_rich Low_complexity Low_complexity 1 41 0 9 712 2278 106 8 63 chrUextra 16662911 16663615 -12341041 - DMSAT6 Satellite Satellite -75 665 1 9 712 1216 198 140 32 chrUextra 16663723 16664252 -12340404 + Gypsy12_LTR LTR Gypsy 1164 1727 -553 9 712 860 50 33 60 chrUextra 16664266 16664416 -12340240 + Gypsy12_I LTR Gypsy 1 146 -5400 9 712 1145 23 23 23 chrUextra 16664519 16664694 -12339962 + NTS_DM Other Other 66 240 0 9 712 1734 21 17 17 chrUextra 16664694 16664934 -12339722 + NTS_DM Other Other 1 240 0 9 712 1756 17 17 17 chrUextra 16664934 16665174 -12339482 + NTS_DM Other Other 1 240 0 9 712 382 41 0 0 chrUextra 16665174 16665223 -12339433 + NTS_DM Other Other 1 49 -191 9 712 2445 173 47 17 chrUextra 16665324 16666027 -12338629 - SAR_DM Satellite Satellite -620 724 1 9 712 6553 0 0 0 chrUextra 16666931 16667635 -12337021 + MDG3_I LTR Gypsy 425 1128 -3858 9 712 4193 43 51 10 chrUextra 16667735 16668439 -12336217 + R1_DM LINE R1 597 1424 -3932 9 712 5452 44 21 0 chrUextra 16668543 16669243 -12335413 + R1_DM LINE R1 441 1155 -4201 9 712 1833 9 18 13 chrUextra 16669343 16669568 -12335088 + NTS_DM Other Other 15 240 0 9 712 1965 4 17 17 chrUextra 16669568 16669808 -12334848 + NTS_DM Other Other 1 240 0 9 712 1901 4 29 21 chrUextra 16669808 16670046 -12334610 + NTS_DM Other Other 1 240 0 9 712 4589 18 0 0 chrUextra 16670147 16670661 -12333995 - R1_DM LINE R1 -817 4539 4026 9 712 1496 27 16 27 chrUextra 16670663 16670851 -12333805 - R1_DM LINE R1 -1679 3677 3492 9 712 2537 34 74 6 chrUextra 16670951 16671198 -12333458 - DMRT1B LINE R1 -4771 412 163 9 712 180 0 0 0 chrUextra 16671198 16671218 -12333438 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 9 712 2537 34 74 6 chrUextra 16671218 16671296 -12333360 - DMRT1B LINE R1 -5021 162 66 9 712 1207 126 6 0 chrUextra 16671294 16671476 -12333180 - DMRT1C LINE R1 -4786 657 475 9 712 6494 0 1 3 chrUextra 16671755 16672459 -12332197 + SSU-rRNA_Dme rRNA rRNA 501 1203 -792 9 712 4118 19 0 2 chrUextra 16672559 16673024 -12331632 - Gypsy4_I LTR Gypsy -2625 3663 3200 9 712 2265 16 12 0 chrUextra 16673009 16673263 -12331393 - Gypsy4_I LTR Gypsy -3599 2689 2433 9 712 936 9 0 27 chrUextra 16673375 16673487 -12331169 + NTS_DM Other Other 25 133 -107 9 712 1558 15 20 20 chrUextra 16673487 16673690 -12330966 + NTS_DM Other Other 38 240 0 9 712 902 28 17 22 chrUextra 16673690 16673868 -12330788 + NTS_DM Other Other 1 240 0 9 712 1670 20 0 5 chrUextra 16673868 16674067 -12330589 + NTS_DM Other Other 1 198 -42 9 712 4500 95 109 0 chrUextra 16674167 16674871 -12329785 + TART LINE telomeric 700 1480 -12997 9 712 1216 68 0 0 chrUextra 16674971 16675134 -12329522 - ARS406_DM Unknown Unknown -190 163 1 9 712 2167 175 40 10 chrUextra 16675134 16675675 -12328981 + SAR_DM Satellite Satellite 1 725 -677 9 712 6341 3 0 1 chrUextra 16675775 16676479 -12328177 - DMRT1B LINE R1 -628 4555 3853 9 712 2425 0 0 0 chrUextra 16676579 16676839 -12327817 + GTWIN_I LTR Gypsy 6162 6421 0 9 712 4162 0 0 0 chrUextra 16676839 16677283 -12327373 + GTWIN_LTR LTR Gypsy 1 444 -51 9 712 32 0 0 0 chrUextra 16677392 16677424 -12327232 + AT_rich Low_complexity Low_complexity 1 32 0 9 712 28 48 0 0 chrUextra 16677752 16677794 -12326862 + AT_rich Low_complexity Low_complexity 1 42 0 9 712 5955 33 0 0 chrUextra 16678187 16678891 -12325765 + MDG1_I LTR Gypsy 1925 2628 -3968 9 712 1395 0 0 0 chrUextra 16678991 16679146 -12325510 + (GAGAA)n Simple_repeat Simple_repeat 4 158 0 9 712 3972 0 0 0 chrUextra 16679795 16680219 -12324437 + LSU-rRNA_Dme rRNA rRNA 2230 2653 -1247 9 712 256 62 0 0 chrUextra 16680212 16680244 -12324412 + LSU-rRNA_Dme rRNA rRNA 2601 2632 -1268 9 712 2309 0 8 0 chrUextra 16680244 16680499 -12324157 + R1_DM LINE R1 1 257 -5099 9 712 2819 174 17 10 chrUextra 16680599 16681303 -12323353 - SAR_DM Satellite Satellite -647 708 1 9 712 26 30 0 0 chrUextra 16681422 16681455 -12323201 + AT_rich Low_complexity Low_complexity 1 33 0 9 712 2337 44 0 0 chrUextra 16681834 16682107 -12322549 - PROTOP DNA P 0 4480 4208 9 712 956 70 0 0 chrUextra 16682207 16682336 -12322320 - ARS406_DM Unknown Unknown -224 129 1 9 712 3199 178 12 10 chrUextra 16682230 16682911 -12321745 + SAR_DM Satellite Satellite 180 861 -611 9 712 3913 48 111 20 chrUextra 16683022 16683715 -12320941 + BATUMI_I LTR Pao 1128 1883 -6080 9 712 2045 45 4 0 chrUextra 16683815 16684057 -12320599 + PROTOP DNA P 4238 4480 0 9 712 26 30 0 0 chrUextra 16684436 16684469 -12320187 + AT_rich Low_complexity Low_complexity 1 33 0 9 712 6189 20 1 0 chrUextra 16684619 16685323 -12319333 + R1_DM LINE R1 1986 2690 -2666 9 712 721 334 23 23 chrUextra 16685550 16685991 -12318665 + Gypsy6_I LTR Gypsy 2765 3205 -3807 9 712 935 51 150 19 chrUextra 16685967 16686127 -12318529 + TLD2 Unknown Unknown 1 181 -37 9 712 3477 176 7 8 chrUextra 16686227 16686931 -12317725 - SAR_DM Satellite Satellite -398 1074 372 9 712 3961 0 7 2 chrUextra 16687031 16687467 -12317189 + R2_DM LINE R2 3170 3607 0 9 712 2479 15 0 0 chrUextra 16687463 16687735 -12316921 + LSU-rRNA_Dme rRNA rRNA 2578 2849 -1051 9 712 6326 13 0 0 chrUextra 16687838 16688539 -12316117 + DOC2_DM LINE Jockey 3935 4635 -158 9 712 1316 105 0 5 chrUextra 16688639 16688831 -12315825 + MDG1_LTR LTR Gypsy 222 412 -30 9 712 2739 36 29 115 chrUextra 16688833 16689278 -12315378 + DMCR1A LINE CR1 1 407 -4063 9 712 577 15 0 0 chrUextra 16689276 16689343 -12315313 + DMCR1A LINE CR1 800 866 -3604 9 712 284 200 38 0 chrUextra 16689470 16689550 -12315106 + Gypsy12A_LTR LTR Gypsy 1426 1508 -828 9 712 389 211 41 34 chrUextra 16689604 16689751 -12314905 + Gypsy12A_LTR LTR Gypsy 1580 1727 -553 9 712 2722 60 16 31 chrUextra 16689765 16690147 -12314509 + Gypsy12_I LTR Gypsy 1 376 -5170 9 712 898 9 9 27 chrUextra 16690253 16690364 -12314292 + NTS_DM Other Other 25 133 -107 9 712 1350 18 0 6 chrUextra 16690364 16690529 -12314127 + NTS_DM Other Other 38 201 -39 9 712 936 9 0 27 chrUextra 16690581 16690693 -12313963 + NTS_DM Other Other 25 133 -107 9 712 1350 18 0 6 chrUextra 16690693 16690858 -12313798 + NTS_DM Other Other 38 201 -39 9 712 21 57 0 0 chrUextra 16690858 16690893 -12313763 + AT_rich Low_complexity Low_complexity 1 35 0 9 712 226 0 0 94 chrUextra 16690919 16690951 -12313705 + NTS_DM Other Other 25 53 -187 9 712 6077 1 19 1 chrUextra 16691051 16691755 -12312901 - ROO_I LTR Pao -7140 1116 401 9 712 6412 4 0 0 chrUextra 16691855 16692559 -12312097 + DOC LINE Jockey 847 1550 -3175 9 712 713 191 13 26 chrUextra 16692768 16692924 -12311732 + HETRP_DM Satellite Satellite 1529 1682 -190 9 712 721 194 11 68 chrUextra 16693054 16693231 -12311425 + HETRP_DM Satellite Satellite 1518 1684 -188 9 712 2301 29 44 0 chrUextra 16693463 16693735 -12310921 + Invader3_LTR LTR Gypsy 15 298 0 9 712 2440 39 391 7 chrUextra 16693735 16694167 -12310489 + IVK_DM LINE I 1626 2223 -3179 9 712 5441 42 35 1 chrUextra 16694287 16694971 -12309685 + R1_DM LINE R1 633 1339 -4017 9 712 202 265 0 0 chrUextra 16695103 16695152 -12309504 + (CTG)n Simple_repeat Simple_repeat 2 50 0 9 712 6145 23 0 0 chrUextra 16695875 16696579 -12308077 + R1_DM LINE R1 2366 3069 -2287 9 712 5397 16 25 25 chrUextra 16696679 16697329 -12307327 - ACCORD2_I LTR Gypsy -6562 650 1 9 712 449 19 0 0 chrUextra 16697329 16697382 -12307274 - ACCORD2_LTR LTR Gypsy 0 215 163 9 712 1480 6 0 0 chrUextra 16697483 16697647 -12307009 - DM176_I LTR Gypsy -846 5574 5411 9 712 4936 2 0 0 chrUextra 16697645 16698187 -12306469 - DM176_I LTR Gypsy -2772 3648 3107 9 712 5120 94 11 7 chrUextra 16698287 16698991 -12305665 - Gypsy12_I LTR Gypsy -4059 1487 781 9 712 196 0 0 157 chrUextra 16699092 16699239 -12305417 + CT-rich Low_complexity Low_complexity 21 144 0 9 712 5152 35 3 57 chrUextra 16699895 16700599 -12304057 - BATUMI_I LTR Pao -4746 3217 2552 9 712 6497 0 1 3 chrUextra 16700699 16701403 -12303253 - SSU-rRNA_Dme rRNA rRNA 0 1995 1293 9 712 6208 13 0 1 chrUextra 16701503 16702207 -12302449 + STALKER4_I LTR Gypsy 1425 2127 -4403 9 712 3235 165 21 24 chrUextra 16702311 16703011 -12301645 - SAR_DM Satellite Satellite -478 994 297 9 712 5474 2 2 2 chrUextra 16703111 16703703 -12300953 - LSU-rRNA_Dme rRNA rRNA -669 3231 2640 9 712 1015 9 0 9 chrUextra 16703701 16703815 -12300841 - R1_DM LINE R1 0 5356 5244 9 712 4978 21 3 12 chrUextra 16703915 16704619 -12300037 + DOC LINE Jockey 1953 2730 -1995 9 712 3102 176 21 27 chrUextra 16704721 16705423 -12299233 - SAR_DM Satellite Satellite -318 1154 457 9 712 6236 6 0 1 chrUextra 16705523 16706227 -12298429 + IDEFIX_I LTR Gypsy 158 860 -4768 9 712 2983 172 16 48 chrUextra 16706329 16707018 -12297638 + SAR_DM Satellite Satellite 452 1118 -354 9 712 561 154 0 0 chrUextra 16707133 16707276 -12297380 + (TG)n Simple_repeat Simple_repeat 2 144 0 9 712 3344 0 0 0 chrUextra 16707282 16707641 -12297015 - DMRT1B LINE R1 0 5183 4825 9 712 1774 0 0 0 chrUextra 16707641 16707835 -12296821 - TABOR_LTR LTR Gypsy 0 506 313 9 712 2983 129 41 95 chrUextra 16707935 16708639 -12296017 + PROTOP_B DNA P 319 984 -169 9 712 5690 33 6 16 chrUextra 16708739 16709443 -12295213 + G2_DM LINE Jockey 2053 2749 -353 9 712 4538 101 80 0 chrUextra 16709543 16710247 -12294409 - TART LINE telomeric -13123 1354 595 9 712 268 196 0 19 chrUextra 16710396 16710448 -12294208 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 712 4673 2 2 0 chrUextra 16710549 16711051 -12293605 - LSU-rRNA_Dme rRNA rRNA 0 3900 3398 9 712 4269 40 0 0 chrUextra 16711151 16711652 -12293004 - FW_DM LINE Jockey -4191 501 1 9 712 1597 46 0 5 chrUextra 16711660 16711855 -12292801 + R1_DM LINE R1 1377 1570 -3786 9 712 6307 7 1 0 chrUextra 16711955 16712659 -12291997 + STALKER4_I LTR Gypsy 2032 2736 -3794 9 712 27 29 0 0 chrUextra 16712949 16712983 -12291673 + AT_rich Low_complexity Low_complexity 1 34 0 9 712 265 91 0 0 chrUextra 16713222 16713255 -12291401 + Baggins1 LINE LOA 4727 4759 -694 9 712 769 103 241 0 chrUextra 16713260 16713405 -12291251 + FB4_DM DNA Tc1 3908 4087 -2 9 712 6523 0 0 0 chrUextra 16713563 16714266 -12290390 - Gypsy3_I LTR Gypsy -4396 1781 1079 9 712 6311 6 1 0 chrUextra 16714367 16715071 -12289585 + STALKER4_I LTR Gypsy 1882 2586 -3944 9 712 6045 24 3 1 chrUextra 16715171 16715875 -12288781 - R1_DM LINE R1 -1513 3843 3139 9 712 6262 13 7 0 chrUextra 16715975 16716679 -12287977 - R1_DM LINE R1 -690 4666 3958 9 712 21 89 0 0 chrUextra 16717237 16717293 -12287363 + AT_rich Low_complexity Low_complexity 1 56 0 9 712 1580 6 0 0 chrUextra 16717312 16717483 -12287173 - SSU-rRNA_Dme rRNA rRNA 0 1995 1825 9 712 3263 171 23 14 chrUextra 16717583 16718287 -12286369 - SAR_DM Satellite Satellite -466 1006 297 9 712 865 83 0 0 chrUextra 16718387 16718507 -12286149 - ARS406_DM Unknown Unknown -233 120 1 9 712 3234 177 10 9 chrUextra 16718401 16719091 -12285565 + SAR_DM Satellite Satellite 180 870 -602 9 712 502 0 135 3 chrUextra 16719195 16719507 -12285149 + (TA)n Simple_repeat Simple_repeat 1 353 0 9 712 3634 164 9 9 chrUextra 16719995 16720691 -12283965 + SAR_DM Satellite Satellite 381 1076 -396 9 712 6451 1 0 0 chrUextra 16720799 16721503 -12283153 - ROO_I LTR Pao -3442 4814 4111 9 712 6372 11 1 0 chrUextra 16721603 16722307 -12282349 - BATUMI_I LTR Pao -2319 5644 4940 9 712 3328 171 12 12 chrUextra 16722423 16723111 -12281545 + SAR_DM Satellite Satellite 326 1013 -459 9 712 5549 61 16 3 chrUextra 16723211 16723914 -12280742 - R1_DM LINE R1 -4599 757 46 9 712 1605 30 0 39 chrUextra 16724015 16724222 -12280434 - NINJA_LTR LTR Pao -118 199 1 9 712 4113 36 0 2 chrUextra 16724222 16724719 -12279937 - NINJA_I LTR Pao 0 6011 5516 9 712 6330 3 1 1 chrUextra 16724819 16725523 -12279133 - R1_DM LINE R1 -1459 3897 3194 9 712 5416 8 0 0 chrUextra 16725623 16726225 -12278431 - FW_DM LINE Jockey -2820 1872 1271 9 712 933 19 0 0 chrUextra 16726222 16726327 -12278329 - FW_DM LINE Jockey -3658 1034 930 9 712 4326 97 77 33 chrUextra 16726427 16727129 -12277527 - Gypsy12_I LTR Gypsy -4635 911 179 9 712 675 0 0 0 chrUextra 16727233 16727306 -12277350 - NTS_DM Other Other -130 110 38 9 712 918 18 0 27 chrUextra 16727306 16727418 -12277238 - NTS_DM Other Other -107 133 25 9 712 21 57 0 0 chrUextra 16727444 16727479 -12277177 + AT_rich Low_complexity Low_complexity 1 35 0 9 712 1350 18 0 6 chrUextra 16727479 16727644 -12277012 - NTS_DM Other Other -39 201 38 9 712 936 9 0 27 chrUextra 16727644 16727756 -12276900 - NTS_DM Other Other -107 133 25 9 712 913 24 8 8 chrUextra 16727808 16727935 -12276721 - NTS_DM Other Other -39 201 75 9 712 4074 71 35 7 chrUextra 16728035 16728603 -12276053 - Gypsy7_I LTR Gypsy -3061 1923 1340 9 712 1103 76 0 0 chrUextra 16728594 16728739 -12275917 - Gypsy7_I LTR Gypsy -3755 1229 1085 9 712 5210 43 45 20 chrUextra 16728839 16729543 -12275113 + R1_DM LINE R1 333 1054 -4302 9 712 3651 0 0 0 chrUextra 16729643 16730032 -12274624 + LSU-rRNA_Dme rRNA rRNA 3512 3900 0 9 712 26 0 0 0 chrUextra 16730104 16730130 -12274526 + AT_rich Low_complexity Low_complexity 1 26 0 9 712 268 196 0 19 chrUextra 16730132 16730184 -12274472 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 712 268 196 0 19 chrUextra 16730224 16730276 -12274380 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 712 2517 0 0 4 chrUextra 16730472 16730748 -12273908 + BURDOCK_LTR LTR Gypsy 1 275 0 9 712 3515 7 0 0 chrUextra 16730748 16731151 -12273505 + BURDOCK_I LTR Gypsy 1 403 -5457 9 712 2014 5 5 0 chrUextra 16731251 16731472 -12273184 - SSU-rRNA_Dme rRNA rRNA -1773 222 1 9 712 32 0 0 0 chrUextra 16731604 16731636 -12273020 + AT_rich Low_complexity Low_complexity 1 32 0 9 712 1595 0 6 0 chrUextra 16732055 16732230 -12272426 - R1_DM LINE R1 -5180 176 1 9 712 4889 4 0 0 chrUextra 16732230 16732759 -12271897 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2104 9 712 1084 8 0 0 chrUextra 16732859 16732976 -12271680 + R1_DM LINE R1 5240 5356 0 9 712 5476 2 0 0 chrUextra 16732978 16733563 -12271093 + LSU-rRNA_Dme rRNA rRNA 2640 3224 -676 9 712 6295 16 10 0 chrUextra 16733663 16734367 -12270289 - LSU-rRNA_Dme rRNA rRNA -163 3737 3027 9 712 2351 11 0 0 chrUextra 16734468 16734732 -12269924 - R1_DM LINE R1 -3092 2264 2001 9 712 3436 54 26 0 chrUextra 16734744 16735171 -12269485 - R1_DM LINE R1 -3739 1617 1180 9 712 2690 98 44 13 chrUextra 16735271 16735972 -12268684 + DMSAT6 Satellite Satellite 1 723 -267 9 712 988 332 20 22 chrUextra 16736082 16736680 -12267976 + MICROPIA_I LTR Gypsy 118 710 -3389 9 712 3654 158 17 8 chrUextra 16736880 16737583 -12267073 - SAR_DM Satellite Satellite -432 1040 332 9 712 6292 0 1 0 chrUextra 16737683 16738387 -12266269 + STALKER4_I LTR Gypsy 858 1562 -4968 9 712 4878 81 0 3 chrUextra 16738487 16739185 -12265471 + BATUMI_I LTR Pao 5858 6796 -1118 9 712 554 0 16 0 chrUextra 16739291 16739353 -12265303 - NTS_DM Other Other -177 63 1 9 712 2006 0 17 13 chrUextra 16739353 16739592 -12265064 - NTS_DM Other Other 0 240 1 9 712 1956 13 17 13 chrUextra 16739592 16739831 -12264825 - NTS_DM Other Other 0 240 1 9 712 1134 25 24 24 chrUextra 16739831 16739995 -12264661 - NTS_DM Other Other 0 240 77 9 712 3360 174 9 7 chrUextra 16740903 16741580 -12263076 + SAR_DM Satellite Satellite 399 1076 -396 9 712 238 127 17 52 chrUextra 16741545 16741603 -12263053 - XDMR_DM Unknown Unknown 0 360 305 9 712 5767 32 4 13 chrUextra 16741703 16742407 -12262249 - BATUMI_I LTR Pao -5730 2233 1536 9 712 6116 21 7 4 chrUextra 16742508 16743211 -12261445 + CIRCE LINE Composite 3169 3873 -2483 9 712 3238 11 0 5 chrUextra 16744126 16744495 -12260161 + ROVER-LTR_DM LTR Gypsy 1 367 0 9 712 2806 3 3 6 chrUextra 16744495 16744819 -12259837 + ROVER-I_DM LTR Gypsy 1 323 -6261 9 712 3680 168 7 6 chrUextra 16744919 16745621 -12259035 - SAR_DM Satellite Satellite -444 1028 326 9 712 3380 170 14 14 chrUextra 16745723 16746427 -12258229 + SAR_DM Satellite Satellite 208 911 -561 9 712 868 117 11 16 chrUextra 16746527 16746890 -12257766 - RSP Satellite Satellite -31 361 1 9 712 837 143 0 17 chrUextra 16746930 16747222 -12257434 - RSP Satellite Satellite -1 287 1 9 712 1532 43 108 4 chrUextra 16747331 16747571 -12257085 - PROTOP_B DNA P -399 754 497 9 712 4027 19 0 4 chrUextra 16747571 16748035 -12256621 + PROTOP_A DNA P 1 462 -643 9 712 1734 14 22 18 chrUextra 16748135 16748360 -12256296 + NTS_DM Other Other 15 240 0 9 712 1947 13 17 13 chrUextra 16748360 16748599 -12256057 + NTS_DM Other Other 1 240 0 9 712 1973 8 17 13 chrUextra 16748599 16748838 -12255818 + NTS_DM Other Other 1 240 0 9 712 5827 26 13 0 chrUextra 16748939 16749625 -12255031 - NINJA_I LTR Pao -1318 4693 3999 9 712 6296 1 0 0 chrUextra 16749743 16750420 -12254236 - FW_DM LINE Jockey -702 3990 3314 9 712 3214 100 83 36 chrUextra 16750547 16751158 -12253498 - BATUMI_I LTR Pao -7323 640 1 9 712 756 33 0 11 chrUextra 16751158 16751251 -12253405 - BATUMI_I LTR Pao -679 7284 7193 9 712 6111 6 8 0 chrUextra 16751351 16752055 -12252601 + DM176_I LTR Gypsy 1278 1987 -4433 9 712 6408 8 0 6 chrUextra 16752959 16753663 -12250993 + MICROPIA_I LTR Gypsy 3140 3839 -637 9 712 6365 1 0 1 chrUextra 16753763 16754467 -12250189 + R1_DM LINE R1 2877 3579 -1777 9 712 913 98 0 0 chrUextra 16754567 16754700 -12249956 - ARS406_DM Unknown Unknown -220 133 1 9 712 3206 181 7 7 chrUextra 16754594 16755267 -12249389 + SAR_DM Satellite Satellite 180 852 -620 9 712 6462 0 1 0 chrUextra 16755371 16756075 -12248581 - Copia_I LTR Copia -3285 1308 604 9 712 5986 11 0 1 chrUextra 16756175 16756879 -12247777 - QUASIMODO_I LTR Gypsy -965 5095 4393 9 712 3726 140 12 2 chrUextra 16757125 16757683 -12246973 + Gypsy12_I LTR Gypsy 3492 4055 -1491 9 712 4670 11 37 0 chrUextra 16758587 16759130 -12245526 + IDEFIX_LTR LTR Gypsy 32 594 0 9 712 784 83 25 13 chrUextra 16759133 16759291 -12245365 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 9 712 6386 0 1 3 chrUextra 16759391 16760095 -12244561 + LSU-rRNA_Dme rRNA rRNA 541 1243 -2657 9 712 3395 179 9 9 chrUextra 16760195 16760893 -12243763 + SAR_DM Satellite Satellite 379 1076 -396 9 712 3666 160 9 7 chrUextra 16761004 16761703 -12242953 + SAR_DM Satellite Satellite 326 1025 -447 9 712 319 176 5 60 chrUextra 16761918 16762032 -12242624 - HMSBEAGLE_I LTR Gypsy -6308 221 1 9 712 1000 173 102 15 chrUextra 16762031 16762236 -12242420 - DMLTR5 LTR Gypsy 0 266 44 9 712 2490 114 16 33 chrUextra 16762607 16763305 -12241351 + DMSAT6 Satellite Satellite 1 685 -40 9 712 5994 31 0 3 chrUextra 16763413 16764115 -12240541 - R1_DM LINE R1 -571 4785 4086 9 712 1063 0 8 0 chrUextra 16764215 16764332 -12240324 + SSU-rRNA_Dme rRNA rRNA 1878 1995 0 9 712 21 89 0 0 chrUextra 16764351 16764407 -12240249 + AT_rich Low_complexity Low_complexity 1 56 0 9 712 6345 4 0 1 chrUextra 16765019 16765723 -12238933 + R1_DM LINE R1 2690 3392 -1964 9 712 410 257 114 96 chrUextra 16766197 16766477 -12238179 - Invader1_LTR LTR Gypsy -55 368 84 9 712 6102 16 0 0 chrUextra 16766627 16767331 -12237325 + STALKER4_I LTR Gypsy 2606 3309 -3221 9 712 6197 14 0 3 chrUextra 16767431 16768135 -12236521 - DMRT1B LINE R1 -498 4685 3984 9 712 4329 11 2 0 chrUextra 16768235 16768712 -12235944 + LSU-rRNA_Dme rRNA rRNA 2171 2648 -1252 9 712 2125 8 0 0 chrUextra 16768700 16768939 -12235717 + R1_DM LINE R1 4840 5078 -278 9 712 963 60 3 19 chrUextra 16769039 16769722 -12234934 - RSP Satellite Satellite -21 672 1 9 712 3961 0 5 0 chrUextra 16769843 16770271 -12234385 - SSU-rRNA_Dme rRNA rRNA -129 1866 1437 9 712 2541 7 0 0 chrUextra 16770271 16770547 -12234109 + TRANSPAC_LTR LTR Gypsy 1 276 -54 9 712 945 8 31 23 chrUextra 16770650 16770780 -12233876 + NTS_DM Other Other 110 240 0 9 712 1401 6 0 18 chrUextra 16770780 16770945 -12233711 + NTS_DM Other Other 1 162 -78 9 712 521 131 36 0 chrUextra 16771055 16771139 -12233517 + NTS_DM Other Other 4 90 -150 9 712 6335 3 0 3 chrUextra 16771451 16772154 -12232502 + R1_DM LINE R1 1354 2054 -3302 9 712 2598 103 16 20 chrUextra 16772254 16772956 -12231700 - DMSAT6 Satellite Satellite -285 699 1 9 712 6334 1 0 0 chrUextra 16773057 16773760 -12230896 - Copia_I LTR Copia -685 3908 3206 9 712 1335 24 0 12 chrUextra 16773860 16774030 -12230626 - NTS_DM Other Other -35 205 38 9 712 876 0 0 0 chrUextra 16774030 16774126 -12230530 - NTS_DM Other Other -107 133 38 9 712 898 9 9 27 chrUextra 16774126 16774237 -12230419 - NTS_DM Other Other -107 133 25 9 712 21 57 0 0 chrUextra 16774263 16774298 -12230358 + AT_rich Low_complexity Low_complexity 1 35 0 9 712 1350 18 0 6 chrUextra 16774298 16774463 -12230193 - NTS_DM Other Other -39 201 38 9 712 898 10 0 0 chrUextra 16774463 16774563 -12230093 - NTS_DM Other Other -107 133 34 9 712 1837 288 32 14 chrUextra 16774664 16775323 -12229333 - G6_DM LINE Jockey -1050 992 322 9 712 2325 210 25 11 chrUextra 16775466 16776014 -12228642 + TART LINE telomeric 8963 9518 -4959 9 712 2963 60 1 16 chrUextra 16776269 16776662 -12227994 + STALKER4_LTR LTR Gypsy 47 399 -3 9 712 25 0 0 0 chrUextra 16776748 16776773 -12227883 + AT_rich Low_complexity Low_complexity 1 25 0 9 712 560 245 81 11 chrUextra 16776773 16776969 -12227687 + Stalker2_I LTR Gypsy 214 473 -6929 9 1 6099 21 1 3 chrUextra 16777072 16777775 -12226881 - R1_DM LINE R1 -2832 2524 1823 9 713 820 220 5 5 chrUextra 16777883 16778075 -12226581 - Stalker2_I LTR Gypsy -6920 482 291 9 713 25 0 0 0 chrUextra 16778099 16778124 -12226532 + AT_rich Low_complexity Low_complexity 1 25 0 9 713 694 92 20 10 chrUextra 16778244 16778343 -12226313 - STALKER4_LTR LTR Gypsy -23 379 280 9 713 1900 18 0 51 chrUextra 16778343 16778578 -12226078 + CIRCE LINE Composite 1428 1650 -4706 9 713 3012 164 62 20 chrUextra 16778678 16779326 -12225330 - TART LINE telomeric -4941 9536 8862 9 713 6538 1 1 0 chrUextra 16779481 16780181 -12224475 + SSU-rRNA_Dme rRNA rRNA 140 840 -1155 9 713 6429 1 0 1 chrUextra 16781087 16781790 -12222866 - R1_DM LINE R1 -2885 2471 1770 9 713 3512 0 0 0 chrUextra 16781890 16782264 -12222392 - LSU-rRNA_Dme rRNA rRNA -1739 2161 1788 9 713 2501 7 7 3 chrUextra 16782305 16782593 -12222063 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1503 9 713 6428 3 0 0 chrUextra 16782693 16783396 -12221260 - R1_DM LINE R1 -1549 3807 3105 9 713 3431 48 1 14 chrUextra 16783597 16784036 -12220620 + STALKER4_LTR LTR Gypsy 1 399 -3 9 713 31 58 0 0 chrUextra 16784124 16784176 -12220480 + AT_rich Low_complexity Low_complexity 1 52 0 9 713 1009 24 0 8 chrUextra 16784299 16784425 -12220231 - NTS_DM Other Other -78 162 38 9 713 898 9 9 27 chrUextra 16784425 16784536 -12220120 - NTS_DM Other Other -107 133 25 9 713 21 57 0 0 chrUextra 16784562 16784597 -12220059 + AT_rich Low_complexity Low_complexity 1 35 0 9 713 1350 18 0 6 chrUextra 16784597 16784762 -12219894 - NTS_DM Other Other -39 201 38 9 713 936 9 0 27 chrUextra 16784762 16784874 -12219782 - NTS_DM Other Other -107 133 25 9 713 22 56 0 0 chrUextra 16784900 16784936 -12219720 + AT_rich Low_complexity Low_complexity 1 36 0 9 713 278 176 0 19 chrUextra 16784949 16785001 -12219655 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 713 4058 22 0 2 chrUextra 16785905 16786367 -12218289 + G2_DM LINE Jockey 924 1384 -1718 9 713 518 230 17 90 chrUextra 16786362 16786596 -12218060 - Gypsy12_LTR LTR Gypsy -1289 1047 831 9 713 3525 174 7 8 chrUextra 16786708 16787411 -12217245 - SAR_DM Satellite Satellite -515 957 256 9 713 420 250 118 100 chrUextra 16787552 16787832 -12216824 - Invader1_LTR LTR Gypsy -55 368 84 9 713 598 196 0 9 chrUextra 16788100 16788213 -12216443 + DMLTR5 LTR Gypsy 122 233 -33 9 713 6429 1 3 3 chrUextra 16788314 16789017 -12215639 + SSU-rRNA_Dme rRNA rRNA 646 1348 -647 9 713 1106 101 101 0 chrUextra 16789118 16789286 -12215370 + DNAREP1_DM LINE Penelope 410 594 0 9 713 6184 4 1 1 chrUextra 16789920 16790623 -12214033 - R1_DM LINE R1 -4427 929 227 9 713 6405 0 0 0 chrUextra 16790723 16791426 -12213230 + ROO_I LTR Pao 6118 6820 -1436 9 713 3219 185 9 9 chrUextra 16791526 16792213 -12212443 + SAR_DM Satellite Satellite 209 895 -577 9 713 599 125 10 0 chrUextra 16792133 16792229 -12212427 - ARS406_DM Unknown Unknown -164 189 93 9 713 6438 3 0 0 chrUextra 16792329 16793032 -12211624 + FW_DM LINE Jockey 341 1043 -3649 9 713 387 89 0 0 chrUextra 16793273 16793329 -12211327 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 713 3184 0 3 0 chrUextra 16793936 16794279 -12210377 + LSU-rRNA_Dme rRNA rRNA 3557 3900 0 9 713 268 196 0 19 chrUextra 16794380 16794432 -12210224 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 713 268 196 0 19 chrUextra 16794472 16794524 -12210132 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 713 278 176 0 19 chrUextra 16794555 16794607 -12210049 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 713 1213 48 7 0 chrUextra 16794738 16794885 -12209771 + PROTOP_B DNA P 963 1110 -43 9 713 1091 147 182 4 chrUextra 16794882 16795107 -12209549 - DMCR1A LINE CR1 -1125 3345 3081 9 713 1068 168 102 15 chrUextra 16795194 16795399 -12209257 + DMLTR5 LTR Gypsy 40 262 -4 9 713 255 73 0 0 chrUextra 16795400 16795441 -12209215 + HMSBEAGLE_I LTR Gypsy 2 42 -6487 9 713 364 217 106 0 chrUextra 16795546 16795707 -12208949 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 9 713 327 222 100 12 chrUextra 16795675 16795835 -12208821 + (CAGAA)n Simple_repeat Simple_repeat 1 174 0 9 713 281 165 119 12 chrUextra 16796004 16796164 -12208492 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 9 713 5955 27 36 0 chrUextra 16796344 16797047 -12207609 + FW_DM LINE Jockey 333 1060 -3632 9 713 366 265 114 96 chrUextra 16798221 16798501 -12206155 - Invader1_LTR LTR Gypsy -55 368 84 9 713 420 250 118 100 chrUextra 16798782 16799062 -12205594 - Invader1_LTR LTR Gypsy -55 368 84 9 713 672 203 0 0 chrUextra 16799330 16799453 -12205203 + DMLTR5 LTR Gypsy 122 244 -22 9 713 31 58 0 0 chrUextra 16799579 16799631 -12205025 + AT_rich Low_complexity Low_complexity 1 52 0 9 713 3417 51 1 15 chrUextra 16799715 16800155 -12204501 - STALKER4_LTR LTR Gypsy -3 399 1 9 713 436 249 114 96 chrUextra 16800548 16800828 -12203828 - Invader1_LTR LTR Gypsy -55 368 84 9 713 2430 0 0 0 chrUextra 16801162 16801420 -12203236 + BURDOCK_I LTR Gypsy 5603 5860 0 9 713 2517 0 0 4 chrUextra 16801421 16801697 -12202959 + BURDOCK_LTR LTR Gypsy 1 275 0 9 713 32 0 0 0 chrUextra 16802232 16802264 -12202392 + AT_rich Low_complexity Low_complexity 1 32 0 9 713 2496 4 4 0 chrUextra 16802396 16802668 -12201988 + SSU-rRNA_Dme rRNA rRNA 1 273 -1722 9 713 6094 21 0 3 chrUextra 16802768 16803471 -12201185 - CIRCE LINE Composite -1599 4757 4057 9 713 285 106 0 21 chrUextra 16803630 16803678 -12200978 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 713 376 49 65 16 chrUextra 16803700 16803762 -12200894 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 713 766 193 0 7 chrUextra 16803761 16803907 -12200749 - DMLTR5 LTR Gypsy 0 266 122 9 713 4804 20 80 0 chrUextra 16804374 16805077 -12199579 + STALKER4_I LTR Gypsy 1924 2682 -3848 9 713 3183 31 47 0 chrUextra 16805184 16805570 -12199086 - PROTOP DNA P -4057 423 20 9 713 868 93 0 15 chrUextra 16805983 16806240 -12198416 - RSP Satellite Satellite -24 253 1 9 713 837 131 5 19 chrUextra 16806280 16806683 -12197973 - RSP Satellite Satellite -1 397 1 9 713 5856 31 58 0 chrUextra 16806783 16807486 -12197170 - R1_DM LINE R1 -1773 3583 2840 9 713 21 89 0 0 chrUextra 16807655 16807711 -12196945 + AT_rich Low_complexity Low_complexity 1 56 0 9 713 5191 0 4 0 chrUextra 16807730 16808289 -12196367 - SSU-rRNA_Dme rRNA rRNA 0 1995 1435 9 713 3318 187 4 9 chrUextra 16808389 16809090 -12195566 - SAR_DM Satellite Satellite -570 902 205 9 713 6314 11 3 3 chrUextra 16809192 16809895 -12194761 + SSU-rRNA_Dme rRNA rRNA 1060 1762 -233 9 713 6439 8 0 0 chrUextra 16809995 16810698 -12193958 + Gypsy6_I LTR Gypsy 6197 6899 -113 9 713 285 106 0 21 chrUextra 16811171 16811219 -12193437 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 713 376 49 65 16 chrUextra 16811241 16811303 -12193353 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 713 903 175 109 16 chrUextra 16811302 16811494 -12193162 - DMLTR5 LTR Gypsy 0 266 57 9 713 3849 74 8 4 chrUextra 16811601 16812106 -12192550 - R1_DM LINE R1 -4849 507 1 9 713 1491 18 0 0 chrUextra 16812139 16812304 -12192352 - R1_DM LINE R1 0 5356 5192 9 713 6323 10 0 0 chrUextra 16812404 16813107 -12191549 - R1_DM LINE R1 -39 5317 4615 9 713 6498 0 0 0 chrUextra 16813207 16813910 -12190746 - DOC LINE Jockey -1309 3416 2714 9 713 3386 175 13 10 chrUextra 16814010 16814710 -12189946 - SAR_DM Satellite Satellite -489 983 282 9 713 6180 30 0 0 chrUextra 16814813 16815516 -12189140 + MAX_I LTR Pao 3972 4674 -3240 9 713 3500 142 85 42 chrUextra 16815617 16816299 -12188357 - GTWIN_I LTR Gypsy -5468 953 243 9 713 3025 0 0 0 chrUextra 16816419 16816751 -12187905 - FW_DM LINE Jockey -2833 1859 1528 9 713 37 0 0 0 chrUextra 16816929 16816966 -12187690 + AT_rich Low_complexity Low_complexity 1 37 0 9 713 2995 85 126 17 chrUextra 16817268 16817925 -12186731 - Gypsy12_I LTR Gypsy 0 5546 4818 9 713 1581 22 6 0 chrUextra 16818547 16818728 -12185928 + ROO_LTR LTR Pao 1 182 -246 9 713 570 0 0 0 chrUextra 16818828 16818891 -12185765 - Copia_I LTR Copia -4530 63 1 9 713 2468 0 0 0 chrUextra 16818891 16819167 -12185489 - Copia_LTR LTR Copia 0 276 1 9 713 202 265 29 0 chrUextra 16819183 16819251 -12185405 + T-rich Low_complexity Low_complexity 3 72 0 9 713 6358 0 0 1 chrUextra 16819631 16820334 -12184322 - ROO_I LTR Pao -4433 3823 3122 9 713 28 48 0 0 chrUextra 16820482 16820524 -12184132 + AT_rich Low_complexity Low_complexity 1 42 0 9 713 534 119 36 0 chrUextra 16820797 16820881 -12183775 - NTS_DM Other Other -150 90 4 9 713 1155 14 7 21 chrUextra 16820991 16821136 -12183520 - NTS_DM Other Other -78 162 20 9 713 5996 0 1 36 chrUextra 16821237 16821940 -12182716 - LSU-rRNA_Dme rRNA rRNA -3135 765 87 9 713 2306 74 0 0 chrUextra 16822040 16822339 -12182317 - R1_DM LINE R1 -3691 1665 1367 9 713 3701 5 0 0 chrUextra 16822339 16822743 -12181913 - R1_DM LINE R1 0 5356 4953 9 713 6342 4 1 1 chrUextra 16822843 16823546 -12181110 - FW_DM LINE Jockey -97 4595 3893 9 713 229 0 0 0 chrUextra 16823646 16823671 -12180985 + ARS406_DM Unknown Unknown 137 161 -192 9 713 2863 178 23 15 chrUextra 16823649 16824349 -12180307 - SAR_DM Satellite Satellite -255 1217 198 9 713 1871 178 45 28 chrUextra 16824450 16825150 -12179506 + SAR_DM Satellite Satellite 1 711 -416 9 713 4084 103 81 33 chrUextra 16825260 16825955 -12178701 + Gypsy12_I LTR Gypsy 223 950 -4596 9 713 2503 188 12 7 chrUextra 16826055 16826757 -12177899 - SAR_DM Satellite Satellite -692 705 1 9 713 909 0 0 0 chrUextra 16826858 16826955 -12177701 - SSU-rRNA_Dme rRNA rRNA -1898 97 1 9 713 32 0 0 0 chrUextra 16827087 16827119 -12177537 + AT_rich Low_complexity Low_complexity 1 32 0 9 713 28 48 0 0 chrUextra 16827447 16827489 -12177167 + AT_rich Low_complexity Low_complexity 1 42 0 9 713 6010 1 0 36 chrUextra 16827661 16828364 -12176292 + LSU-rRNA_Dme rRNA rRNA 92 769 -3131 9 713 6438 0 0 0 chrUextra 16828464 16829167 -12175489 + R1_DM LINE R1 2351 3053 -2303 9 713 6041 30 0 0 chrUextra 16829267 16829970 -12174686 - R1_DM LINE R1 -2087 3269 2567 9 713 2233 16 0 8 chrUextra 16830070 16830329 -12174327 - R1_DM LINE R1 -3162 2194 1938 9 713 1886 54 0 4 chrUextra 16830313 16830556 -12174100 - R1_DM LINE R1 -4741 615 374 9 713 1640 69 9 0 chrUextra 16830557 16830773 -12173883 - R1_DM LINE R1 -5101 255 38 9 713 6297 6 0 0 chrUextra 16830873 16831576 -12173080 - QUASIMODO_I LTR Gypsy -4047 2013 1311 9 713 6444 0 1 1 chrUextra 16831676 16832379 -12172277 + FW_DM LINE Jockey 649 1351 -3341 9 713 2678 83 19 9 chrUextra 16832492 16833182 -12171474 - DMSAT6 Satellite Satellite 0 696 1 9 713 3964 0 2 0 chrUextra 16833282 16833707 -12170949 + LSU-rRNA_Dme rRNA rRNA 3475 3900 0 9 713 25 0 0 0 chrUextra 16833779 16833804 -12170852 + AT_rich Low_complexity Low_complexity 1 25 0 9 713 241 163 0 58 chrUextra 16833806 16833858 -12170798 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 713 241 163 0 58 chrUextra 16833906 16833958 -12170698 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 713 5314 5 0 0 chrUextra 16834085 16834672 -12169984 + FW_DM LINE Jockey 4106 4692 0 9 713 813 71 0 0 chrUextra 16834675 16834788 -12169868 + ARS406_DM Unknown Unknown 42 154 -199 9 713 2929 3 0 0 chrUextra 16834888 16835206 -12169450 + QUASIMODO_LTR LTR Gypsy 341 658 0 9 713 761 133 0 0 chrUextra 16835212 16835325 -12169331 - HMSBEAGLE_I LTR Gypsy -1814 4715 4603 9 713 1967 105 4 0 chrUextra 16835325 16835591 -12169065 - HMSBEAGLE_I LTR Gypsy -1344 5185 4919 9 713 6372 6 0 1 chrUextra 16835691 16836394 -12168262 + DOC LINE Jockey 2387 3088 -1637 9 713 4207 5 2 56 chrUextra 16837297 16837913 -12166743 - DM412B_LTR LTR Gypsy -89 482 1 9 713 6462 0 1 1 chrUextra 16838100 16838803 -12165853 + ROO_I LTR Pao 2205 2907 -5349 9 713 4922 12 0 0 chrUextra 16838903 16839496 -12165160 + DM176_I LTR Gypsy 5828 6420 0 9 713 740 10 9 82 chrUextra 16839496 16839606 -12165050 + DM176_LTR LTR Gypsy 1 102 -405 9 713 6565 1 0 0 chrUextra 16839706 16840409 -12164247 - DMRT1B LINE R1 -1353 3830 3128 9 713 6387 1 0 0 chrUextra 16840509 16841212 -12163444 - FW_DM LINE Jockey -1490 3202 2500 9 713 739 328 37 25 chrUextra 16841321 16841716 -12162940 + MICROPIA_I LTR Gypsy 3534 3893 -583 9 713 2977 199 21 16 chrUextra 16842115 16842813 -12161843 + SAR_DM Satellite Satellite 402 1103 -369 9 713 260 163 0 0 chrUextra 16842775 16842818 -12161838 - XDMR Unknown Unknown 0 361 319 9 713 5927 6 31 3 chrUextra 16842918 16843621 -12161035 - ROO_I LTR Pao -7305 951 229 9 713 2347 42 0 0 chrUextra 16843721 16844005 -12160651 - IDEFIX_I LTR Gypsy -5344 284 1 9 713 25 0 0 0 chrUextra 16844298 16844323 -12160333 + AT_rich Low_complexity Low_complexity 1 25 0 9 713 4608 6 0 0 chrUextra 16844524 16845024 -12159632 + DMRT1B LINE R1 4684 5183 0 9 713 1620 0 0 0 chrUextra 16845047 16845227 -12159429 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 9 713 3080 201 6 8 chrUextra 16845327 16846030 -12158626 + SAR_DM Satellite Satellite 354 1054 -418 9 713 6441 0 3 3 chrUextra 16846130 16846833 -12157823 - SSU-rRNA_Dme rRNA rRNA -364 1631 929 9 713 6561 1 0 0 chrUextra 16846933 16847636 -12157020 - BURDOCK_I LTR Gypsy -2172 3688 2986 9 713 2168 8 0 0 chrUextra 16847736 16847972 -12156684 - MAX_LTR LTR Pao -85 236 1 9 713 4205 4 0 0 chrUextra 16847972 16848439 -12156217 - MAX_I LTR Pao 0 7914 7448 9 713 6232 21 0 1 chrUextra 16848539 16849242 -12155414 + R1_DM LINE R1 3959 4660 -696 9 713 5957 21 14 3 chrUextra 16849342 16850043 -12154613 - DMRT1B LINE R1 -3597 1586 878 9 713 2961 194 15 14 chrUextra 16850145 16850848 -12153808 - SAR_DM Satellite Satellite -663 703 1 9 713 1059 146 33 102 chrUextra 16851765 16852009 -12152647 - DMLTR5 LTR Gypsy 0 266 40 9 713 858 135 0 0 chrUextra 16852097 16852223 -12152433 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 9 713 326 171 27 67 chrUextra 16852322 16852397 -12152259 - HMSBEAGLE_I LTR Gypsy -124 6405 6334 9 713 1726 93 8 0 chrUextra 16852554 16852802 -12151854 - R1_DM LINE R1 -5084 272 23 9 713 3860 21 0 0 chrUextra 16852823 16853257 -12151399 - R1_DM LINE R1 0 5356 4923 9 713 6301 1 3 0 chrUextra 16853357 16854060 -12150596 + ROO_I LTR Pao 3482 4186 -4070 9 713 5942 44 0 1 chrUextra 16854161 16854863 -12149793 - DIVER_I LTR Pao -4659 984 284 9 713 1603 0 0 0 chrUextra 16854963 16855134 -12149522 + ROO_LTR LTR Pao 258 428 0 9 713 4775 2 2 2 chrUextra 16855134 16855666 -12148990 + ROO_I LTR Pao 1 532 -7724 9 713 22 35 0 0 chrUextra 16855778 16855807 -12148849 + AT_rich Low_complexity Low_complexity 1 29 0 9 713 5764 11 0 0 chrUextra 16855841 16856469 -12148187 + Copia2_I LTR Copia 3117 3744 -418 9 713 2945 151 126 50 chrUextra 16857376 16858075 -12146581 + HETA LINE telomeric 5038 5746 -335 9 713 262 216 26 39 chrUextra 16858175 16858252 -12146404 + HETRP_DM Satellite Satellite 1607 1682 -190 9 713 728 188 13 25 chrUextra 16858371 16858529 -12146127 + HETRP_DM Satellite Satellite 1529 1684 -188 9 713 671 202 12 58 chrUextra 16858629 16858802 -12145854 + HETRP_DM Satellite Satellite 1518 1682 -190 9 713 338 262 0 24 chrUextra 16858979 16859061 -12145595 + HETRP_DM Satellite Satellite 1603 1682 -190 9 713 716 197 13 19 chrUextra 16859214 16859369 -12145287 + HETRP_DM Satellite Satellite 1529 1682 -190 9 713 747 209 6 19 chrUextra 16859524 16859680 -12144976 + HETRP_DM Satellite Satellite 1529 1682 -190 9 713 2439 62 0 75 chrUextra 16860662 16861008 -12143648 + CIRCE LINE Composite 973 1292 -5064 9 713 660 329 22 22 chrUextra 16860920 16861231 -12143425 + Gypsy12_I LTR Gypsy 3059 3369 -2177 9 713 1443 36 0 99 chrUextra 16861074 16861287 -12143369 + CIRCE LINE Composite 1305 1496 -4860 9 713 3215 173 6 31 chrUextra 16861387 16862090 -12142566 - SAR_DM Satellite Satellite -354 1118 434 9 713 737 56 0 9 chrUextra 16862190 16862298 -12142358 + (TTCTC)n Simple_repeat Simple_repeat 4 110 0 9 713 6229 10 1 0 chrUextra 16862995 16863696 -12140960 + STALKER4_I LTR Gypsy 5162 5863 -667 9 713 2464 102 24 43 chrUextra 16863801 16864469 -12140187 + DMSAT6 Satellite Satellite 1 655 -29 9 713 808 80 47 16 chrUextra 16864599 16864726 -12139930 + STALKER4_I LTR Gypsy 2090 2220 -4310 9 713 291 56 0 0 chrUextra 16864714 16864750 -12139906 + Stalker2_I LTR Gypsy 2628 2663 -4739 9 713 1551 96 37 8 chrUextra 16864752 16864993 -12139663 + STALKER4_I LTR Gypsy 2617 2864 -3666 9 713 2069 68 3 35 chrUextra 16864992 16865281 -12139375 - Gypsy6A_LTR LTR Gypsy -70 350 71 9 713 1041 93 0 0 chrUextra 16865874 16866102 -12138554 + (ACATG)n Simple_repeat Simple_repeat 1 228 0 9 713 1158 122 0 0 chrUextra 16866225 16866405 -12138251 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 713 2474 8 0 0 chrUextra 16866405 16866671 -12137985 + DMLTR5 LTR Gypsy 1 266 0 9 713 2130 0 0 8 chrUextra 16866670 16866908 -12137748 + HMSBEAGLE_I LTR Gypsy 1 236 -6293 9 713 6406 1 3 3 chrUextra 16867811 16868510 -12136146 + SSU-rRNA_Dme rRNA rRNA 1253 1951 -44 9 713 6113 4 4 1 chrUextra 16868616 16869317 -12135339 + STALKER4_I LTR Gypsy 755 1457 -5073 9 713 1338 261 2 7 chrUextra 16870224 16870676 -12133980 + Gypsy11_I LTR Gypsy 2938 3387 -137 9 713 3737 39 0 0 chrUextra 16871023 16871463 -12133193 + DMCR1A LINE CR1 4031 4470 0 9 713 426 290 304 8 chrUextra 16871466 16871723 -12132933 - MICROPIA_I LTR Gypsy -2797 1679 1347 9 713 5335 19 82 0 chrUextra 16871826 16872457 -12132199 + R1_DM LINE R1 4009 4691 -665 9 713 560 99 0 12 chrUextra 16872447 16872529 -12132127 + R1_DM LINE R1 5034 5114 -242 9 713 202 265 0 0 chrUextra 16873463 16873512 -12131144 + (CTG)n Simple_repeat Simple_repeat 2 50 0 9 713 1625 47 0 0 chrUextra 16874235 16874427 -12130229 - R1_DM LINE R1 -3941 1415 1224 9 713 4004 62 19 4 chrUextra 16874423 16874938 -12129718 - R1_DM LINE R1 -4623 733 211 9 713 3969 47 83 2 chrUextra 16875038 16875554 -12129102 + DIVER2_I LTR Pao 1885 2442 -1705 9 713 5345 68 17 3 chrUextra 16875841 16876544 -12128112 + R1_DM LINE R1 15 727 -4629 9 713 21 0 0 0 chrUextra 16877014 16877035 -12127621 + AT_rich Low_complexity Low_complexity 1 21 0 9 713 49 43 0 0 chrUextra 16877209 16877279 -12127377 + AT_rich Low_complexity Low_complexity 1 70 0 9 713 21 0 0 0 chrUextra 16877547 16877568 -12127088 + AT_rich Low_complexity Low_complexity 1 21 0 9 713 1778 31 18 0 chrUextra 16879856 16880080 -12124576 - BATUMI_I LTR Pao -1309 6654 6427 9 713 3925 18 0 2 chrUextra 16880103 16880559 -12124097 + BATUMI_I LTR Pao 7303 7757 -206 9 713 928 9 0 27 chrUextra 16880680 16880792 -12123864 - NTS_DM Other Other -107 133 25 9 713 1332 18 0 6 chrUextra 16880844 16881009 -12123647 - NTS_DM Other Other -39 201 38 9 713 928 9 0 27 chrUextra 16881009 16881121 -12123535 - NTS_DM Other Other -107 133 25 9 713 22 56 0 0 chrUextra 16881147 16881183 -12123473 + AT_rich Low_complexity Low_complexity 1 36 0 9 713 257 154 258 15 chrUextra 16881183 16881249 -12123407 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2570 9 713 266 196 0 19 chrUextra 16881280 16881332 -12123324 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 713 5108 62 100 6 chrUextra 16882265 16882968 -12121688 - BATUMI_I LTR Pao -6058 1905 1137 9 713 5369 100 0 0 chrUextra 16883068 16883771 -12120885 + HMSBEAGLE_I LTR Gypsy 3749 4451 -2078 9 713 6493 3 0 1 chrUextra 16883871 16884574 -12120082 + LSU-rRNA_Dme rRNA rRNA 2144 2845 -1055 9 713 6211 3 0 0 chrUextra 16885477 16886180 -12118476 + Invader2_I LTR Gypsy 3735 4437 -155 9 713 5719 0 4 65 chrUextra 16886280 16886983 -12117673 - LSU-rRNA_Dme rRNA rRNA -1745 2155 1496 9 713 1620 38 0 0 chrUextra 16887088 16887573 -12117083 + (ATAAG)n Simple_repeat Simple_repeat 1 485 0 9 713 2008 0 0 0 chrUextra 16887573 16887786 -12116870 - ROO_LTR LTR Pao 0 428 216 9 713 34 24 0 0 chrUextra 16887995 16888036 -12116620 + AT_rich Low_complexity Low_complexity 1 41 0 9 713 5710 24 1 0 chrUextra 16888689 16889392 -12115264 + R1_DM LINE R1 2940 3643 -1713 9 713 5730 28 0 0 chrUextra 16889492 16890195 -12114461 + R1_DM LINE R1 3119 3821 -1535 9 713 2989 25 0 0 chrUextra 16890295 16890657 -12113999 - FW_DM LINE Jockey -1091 3601 3240 9 713 2888 15 0 0 chrUextra 16890657 16890998 -12113658 + STALKER4_LTR LTR Gypsy 1 341 -61 9 713 1777 5 0 0 chrUextra 16891098 16891314 -12113342 + FW_DM LINE Jockey 4476 4691 -1 9 713 2218 169 8 8 chrUextra 16891319 16891801 -12112855 + SAR_DM Satellite Satellite 536 1017 -455 9 713 756 96 8 0 chrUextra 16891901 16892026 -12112630 - ARS406_DM Unknown Unknown -227 126 1 9 713 2927 179 13 6 chrUextra 16891930 16892604 -12112052 + SAR_DM Satellite Satellite 192 870 -602 9 713 397 9 0 132 chrUextra 16893274 16893403 -12111253 + (TAAAAA)n Simple_repeat Simple_repeat 2 113 0 9 713 1157 15 0 0 chrUextra 16893623 16893758 -12110898 - 5S_DM RNA RNA 0 135 1 9 713 1167 7 0 0 chrUextra 16894003 16894138 -12110518 - 5S_DM RNA RNA 0 135 1 9 713 5747 16 0 3 chrUextra 16894310 16895001 -12109655 - QUASIMODO_I LTR Gypsy -5371 689 1 9 713 2367 91 37 29 chrUextra 16895113 16895815 -12108841 + DMSAT6 Satellite Satellite 1 707 -97 9 713 4853 100 1 0 chrUextra 16895916 16896609 -12108047 - Gypsy12_I LTR Gypsy -1023 4523 3830 9 713 2765 6 0 0 chrUextra 16896739 16897060 -12107596 - MAX_LTR LTR Pao 0 321 1 9 713 2236 96 61 22 chrUextra 16897060 16897422 -12107234 - Gypsy12_I LTR Gypsy -4051 1495 1120 9 713 310 270 26 26 chrUextra 16898060 16898221 -12106435 + TIRANT_I LTR Gypsy 3596 3716 -3976 9 713 2860 149 58 24 chrUextra 16898325 16899028 -12105628 - TART LINE telomeric -4681 9796 9070 9 713 1600 315 6 6 chrUextra 16899130 16899753 -12104903 + HMSBEAGLE_I LTR Gypsy 1458 2080 -4449 9 713 219 114 0 0 chrUextra 16900169 16900204 -12104452 + (GA)n Simple_repeat Simple_repeat 1 35 0 9 713 328 0 0 67 chrUextra 16900737 16900782 -12103874 - NTS_DM Other Other -174 66 25 9 713 1252 18 0 6 chrUextra 16900834 16900999 -12103657 - NTS_DM Other Other -39 201 38 9 713 843 18 0 27 chrUextra 16900999 16901111 -12103545 - NTS_DM Other Other -107 133 25 9 713 1252 18 0 6 chrUextra 16901163 16901328 -12103328 - NTS_DM Other Other -39 201 38 9 713 862 28 0 0 chrUextra 16901328 16901436 -12103220 - NTS_DM Other Other -107 133 26 9 713 704 26 34 34 chrUextra 16901537 16901656 -12103000 + NTS_DM Other Other 122 240 0 9 713 1663 18 13 18 chrUextra 16901656 16901881 -12102775 + NTS_DM Other Other 1 224 -16 9 713 2219 4 4 4 chrUextra 16901881 16902157 -12102499 - Copia_LTR LTR Copia 0 276 1 9 713 682 12 0 0 chrUextra 16902157 16902240 -12102416 - Copia_I LTR Copia 0 4593 4511 9 713 6125 0 0 0 chrUextra 16902340 16903043 -12101613 - DMRT1A LINE R1 -1466 3717 3015 9 713 763 79 187 0 chrUextra 16903143 16903282 -12101374 - ARS406_DM Unknown Unknown -188 165 1 9 713 2438 181 8 8 chrUextra 16903204 16903846 -12100810 + SAR_DM Satellite Satellite 1 642 -677 9 713 1120 0 0 0 chrUextra 16903946 16904073 -12100583 - LSU-rRNA_Dme rRNA rRNA -1986 1914 1788 9 713 4362 9 6 4 chrUextra 16904117 16904649 -12100007 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1256 9 713 2104 215 78 13 chrUextra 16904749 16905450 -12099206 + SAR_DM Satellite Satellite 478 1224 -248 9 713 5626 30 3 1 chrUextra 16905551 16906253 -12098403 + MAX_I LTR Pao 2815 3517 -4397 9 713 2564 74 24 21 chrUextra 16906353 16907055 -12097601 - DMSAT6 Satellite Satellite -4 703 1 9 713 5617 16 7 0 chrUextra 16907155 16907857 -12096799 + Invader2_I LTR Gypsy 1908 2614 -1978 9 713 2033 39 53 4 chrUextra 16907957 16908238 -12096418 + ROO_I LTR Pao 5596 5890 -2366 9 714 5970 1 0 3 chrUextra 16908759 16909461 -12095195 - R1_DM LINE R1 -1734 3622 2923 9 714 6025 1 0 0 chrUextra 16909561 16910263 -12094393 - R1_DM LINE R1 -2125 3231 2530 9 714 6080 1 0 0 chrUextra 16910363 16911065 -12093591 - R1_DM LINE R1 -3195 2161 1460 9 714 2827 187 33 10 chrUextra 16911166 16911867 -12092789 - SAR_DM Satellite Satellite -1042 716 1 9 714 366 183 75 19 chrUextra 16912118 16912224 -12092432 - Copia_I LTR Copia -80 4513 4402 9 714 22 56 0 0 chrUextra 16912270 16912306 -12092350 + AT_rich Low_complexity Low_complexity 1 36 0 9 714 625 205 194 5 chrUextra 16912460 16912646 -12092010 + HETA LINE telomeric 4031 4251 -1830 9 714 1008 0 0 0 chrUextra 16913359 16913471 -12091185 + (CAAGA)n Simple_repeat Simple_repeat 4 115 0 9 714 972 8 0 23 chrUextra 16914373 16914501 -12090155 + NTS_DM Other Other 38 162 -78 9 714 488 119 36 0 chrUextra 16914611 16914695 -12089961 + NTS_DM Other Other 4 90 -150 9 714 28 48 0 0 chrUextra 16914968 16915010 -12089646 + AT_rich Low_complexity Low_complexity 1 42 0 9 714 2768 127 21 101 chrUextra 16915175 16915877 -12088779 + PROTOP_B DNA P 412 1057 -96 9 714 463 0 0 0 chrUextra 16915977 16916030 -12088626 - NTS_DM Other Other -187 53 1 9 714 1836 8 17 13 chrUextra 16916030 16916269 -12088387 - NTS_DM Other Other 0 240 1 9 714 1686 25 17 21 chrUextra 16916269 16916510 -12088146 - NTS_DM Other Other 0 240 1 9 714 1105 18 24 24 chrUextra 16916510 16916679 -12087977 - NTS_DM Other Other 0 240 72 9 714 2522 186 7 22 chrUextra 16916779 16917338 -12087318 + SAR_DM Satellite Satellite 1 651 -393 9 714 355 213 9 18 chrUextra 16917338 16917448 -12087208 - XDMR_DM Unknown Unknown 0 360 252 9 714 2522 186 7 22 chrUextra 16917448 16917481 -12087175 + SAR_DM Satellite Satellite 652 691 -353 9 714 1946 291 13 13 chrUextra 16917581 16918283 -12086373 - FROGGER_I LTR Copia -668 1409 708 9 714 5327 0 3 67 chrUextra 16918383 16919085 -12085571 + LSU-rRNA_Dme rRNA rRNA 1417 2073 -1827 9 714 3149 172 10 8 chrUextra 16919185 16919887 -12084769 - SAR_DM Satellite Satellite -436 1036 334 9 714 5629 1 19 1 chrUextra 16919987 16920683 -12083973 + ROO_I LTR Pao 354 1061 -7195 9 714 4694 100 1 6 chrUextra 16920789 16921491 -12083165 + R1_DM LINE R1 611 1309 -4047 9 714 6030 4 0 1 chrUextra 16921591 16922293 -12082363 - LSU-rRNA_Dme rRNA rRNA -897 3003 2303 9 714 5777 13 0 0 chrUextra 16922393 16923078 -12081578 + R1_DM LINE R1 4672 5356 0 9 714 1071 0 8 0 chrUextra 16923195 16923322 -12081334 - G6_DM LINE Jockey -1914 128 1 9 714 286 194 15 15 chrUextra 16923321 16923389 -12081267 + HETRP_DM Satellite Satellite 1602 1669 -203 9 714 192 40 0 0 chrUextra 16923520 16923545 -12081111 + (GA)n Simple_repeat Simple_repeat 2 26 0 9 714 491 208 8 16 chrUextra 16923545 16923667 -12080989 + HETRP_DM Satellite Satellite 1549 1669 -203 9 714 402 103 0 0 chrUextra 16923834 16923892 -12080764 + HETRP_DM Satellite Satellite 1529 1586 -286 9 714 413 0 62 46 chrUextra 16923997 16924062 -12080594 + NTS_DM Other Other 175 240 0 9 714 1744 21 17 17 chrUextra 16924062 16924302 -12080354 + NTS_DM Other Other 1 240 0 9 714 1756 17 17 17 chrUextra 16924302 16924542 -12080114 + NTS_DM Other Other 1 240 0 9 714 1243 19 0 0 chrUextra 16924542 16924696 -12079960 + NTS_DM Other Other 1 154 -86 9 714 6109 4 0 0 chrUextra 16924799 16925501 -12079155 - R2_DM LINE R2 -805 2802 2101 9 714 413 0 62 46 chrUextra 16925601 16925666 -12078990 + NTS_DM Other Other 175 240 0 9 714 1731 21 17 17 chrUextra 16925666 16925906 -12078750 + NTS_DM Other Other 1 240 0 9 714 1756 17 17 17 chrUextra 16925906 16926146 -12078510 + NTS_DM Other Other 1 240 0 9 714 1243 19 0 0 chrUextra 16926146 16926300 -12078356 + NTS_DM Other Other 1 154 -86 9 714 5578 1 0 36 chrUextra 16926403 16927105 -12077551 - LSU-rRNA_Dme rRNA rRNA -3210 690 14 9 714 2665 178 10 26 chrUextra 16927205 16927906 -12076750 - SAR_DM Satellite Satellite -1022 689 1 9 714 2421 91 19 14 chrUextra 16928019 16928709 -12075947 - DMSAT6 Satellite Satellite -3 693 1 9 714 1316 327 9 22 chrUextra 16928824 16929510 -12075146 - MICROPIA_I LTR Gypsy -626 3850 3198 9 714 3686 68 4 4 chrUextra 16929611 16930115 -12074541 - R1_DM LINE R1 -4852 504 1 9 714 1344 36 0 0 chrUextra 16930148 16930313 -12074343 - R1_DM LINE R1 0 5356 5192 9 714 385 168 10 29 chrUextra 16930413 16930517 -12074139 + XDMR_DM Unknown Unknown 259 360 0 9 714 2802 170 13 28 chrUextra 16930431 16931115 -12073541 - SAR_DM Satellite Satellite -353 1119 446 9 714 3037 177 8 10 chrUextra 16931215 16931917 -12072739 - SAR_DM Satellite Satellite -500 972 272 9 714 6112 0 1 0 chrUextra 16932017 16932719 -12071937 + DOC LINE Jockey 3234 3936 -789 9 714 34 0 0 0 chrUextra 16933209 16933243 -12071413 + AT_rich Low_complexity Low_complexity 1 34 0 9 714 5985 1 1 3 chrUextra 16933621 16934323 -12070333 + LSU-rRNA_Dme rRNA rRNA 655 1355 -2545 9 714 4922 37 2 0 chrUextra 16934423 16935042 -12069614 + MAX_I LTR Pao 2674 3293 -4621 9 714 727 12 0 0 chrUextra 16935039 16935125 -12069531 + MAX_I LTR Pao 3427 3512 -4402 9 714 2850 119 21 45 chrUextra 16936027 16936607 -12068049 - BATUMI_I LTR Pao -6649 1314 749 9 714 327 54 0 82 chrUextra 16936648 16936709 -12067947 - BATUMI_I LTR Pao -7194 769 714 9 714 2998 16 0 0 chrUextra 16936829 16937198 -12067458 + Copia2_I LTR Copia 3794 4162 0 9 714 2466 17 10 0 chrUextra 16937230 16937531 -12067125 + Invader1_LTR LTR Gypsy 1 304 -119 9 714 2826 177 16 26 chrUextra 16937631 16938332 -12066324 - SAR_DM Satellite Satellite -354 1118 425 9 714 32 0 0 0 chrUextra 16938564 16938596 -12066060 + AT_rich Low_complexity Low_complexity 1 32 0 9 714 28 48 0 0 chrUextra 16938924 16938966 -12065690 + AT_rich Low_complexity Low_complexity 1 42 0 9 714 6020 4 0 0 chrUextra 16939235 16939937 -12064719 + FW_DM LINE Jockey 952 1653 -3039 9 714 1781 66 47 4 chrUextra 16940038 16940295 -12064361 - R1_DM LINE R1 -4154 1202 935 9 714 3396 61 2 4 chrUextra 16940277 16940739 -12063917 - R1_DM LINE R1 -4740 616 156 9 714 2020 12 0 0 chrUextra 16941641 16941881 -12062775 + TRANSIB2 DNA Transib 930 1169 -1675 9 714 3391 34 7 0 chrUextra 16941880 16942317 -12062339 + TRANSIB2 DNA Transib 2405 2844 0 9 714 3096 171 13 10 chrUextra 16942443 16943145 -12061511 + SAR_DM Satellite Satellite 301 1004 -468 9 714 2066 84 43 9 chrUextra 16944047 16944396 -12060260 - S_DM DNA Tc1 -1375 361 1 9 714 1114 23 0 8 chrUextra 16944396 16944523 -12060133 - CIRCE LINE Composite -1861 4495 4370 9 714 1155 99 49 58 chrUextra 16944523 16944749 -12059907 - ROVER-LTR_DM LTR Gypsy 0 367 144 9 714 6381 3 0 0 chrUextra 16944849 16945551 -12059105 + R1_DM LINE R1 2857 3558 -1798 9 714 6502 1 0 1 chrUextra 16945651 16946352 -12058304 + LSU-rRNA_Dme rRNA rRNA 2205 2904 -996 9 714 1805 10 0 0 chrUextra 16946453 16946649 -12058007 + MAX_LTR LTR Pao 126 321 0 9 714 4414 6 8 12 chrUextra 16946649 16947155 -12057501 + MAX_I LTR Pao 1 504 -7410 9 714 1243 68 0 6 chrUextra 16947258 16947412 -12057244 + DIVER2_I LTR Pao 8 160 -3987 9 714 4420 6 2 2 chrUextra 16947412 16947894 -12056762 - Gypsy_LTR LTR Gypsy 0 482 1 9 714 581 0 0 0 chrUextra 16947894 16947957 -12056699 - Gypsy_I LTR Gypsy 0 6507 6445 9 714 499 134 42 59 chrUextra 16948174 16948293 -12056363 - NTS_DM Other Other -120 120 4 9 714 1401 6 0 18 chrUextra 16948403 16948568 -12056088 - NTS_DM Other Other -78 162 1 9 714 1541 0 21 16 chrUextra 16948568 16948759 -12055897 - NTS_DM Other Other 0 240 49 9 714 5228 10 9 0 chrUextra 16948859 16949443 -12055213 - PROTOP_A DNA P -516 589 1 9 714 829 87 0 17 chrUextra 16949443 16949560 -12055096 - Gypsy2_I LTR Gypsy -338 5797 5683 9 714 2066 21 21 0 chrUextra 16949663 16949895 -12054761 + STALKER4_LTR LTR Gypsy 28 264 -138 9 714 4212 11 0 0 chrUextra 16949895 16950363 -12054293 - DM176_LTR LTR Gypsy 0 507 40 9 714 3247 32 74 2 chrUextra 16950465 16950871 -12053785 - DOC3_DM LINE Jockey -1301 3439 3005 9 714 2509 34 20 0 chrUextra 16950870 16951165 -12053491 - DOC3_DM LINE Jockey -1886 2854 2554 9 714 1175 8 0 8 chrUextra 16951265 16951399 -12053257 - ROO_LTR LTR Pao -295 133 1 9 714 5154 0 0 0 chrUextra 16951399 16951965 -12052691 + ROO_I LTR Pao 6210 6775 -1481 9 714 6513 1 0 0 chrUextra 16952073 16952769 -12051887 - LSU-rRNA_Dme rRNA rRNA -497 3403 2708 9 714 2495 0 0 0 chrUextra 16952869 16953134 -12051522 - ROO_LTR LTR Pao -163 265 1 9 714 1682 41 272 5 chrUextra 16953159 16953571 -12051085 + PROTOP_B DNA P 358 879 -274 9 714 3025 188 46 23 chrUextra 16953675 16954372 -12050284 + SAR_DM Satellite Satellite 1 713 -203 9 714 5915 21 60 1 chrUextra 16954473 16955175 -12049481 - R1_DM LINE R1 -1522 3834 3092 9 714 21 0 0 0 chrUextra 16955886 16955907 -12048749 + AT_rich Low_complexity Low_complexity 1 21 0 9 714 4239 158 27 1 chrUextra 16957684 16958380 -12046276 + Gypsy5_I LTR Gypsy 3085 3798 -2711 9 714 837 0 0 0 chrUextra 16958485 16958578 -12046078 + (GAGAA)n Simple_repeat Simple_repeat 1 93 0 9 714 2231 101 89 0 chrUextra 16959293 16959620 -12045036 - Gypsy12_I LTR Gypsy -2742 2804 2449 9 714 248 27 216 0 chrUextra 16959626 16959663 -12044993 - PROTOP_A DNA P -1060 45 1 9 714 5654 50 0 3 chrUextra 16960087 16960789 -12043867 - R1_DM LINE R1 -4451 905 206 9 714 6437 7 0 1 chrUextra 16960889 16961590 -12043066 + SSU-rRNA_Dme rRNA rRNA 487 1186 -809 9 714 5945 33 0 1 chrUextra 16961691 16962393 -12042263 - R1_DM LINE R1 -783 4573 3873 9 714 1620 20 0 4 chrUextra 16962493 16962980 -12041676 + (TAGA)n Simple_repeat Simple_repeat 1 485 0 9 714 1474 11 0 11 chrUextra 16963000 16963182 -12041474 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 9 714 1224 7 0 0 chrUextra 16963389 16963524 -12041132 - 5S_DM RNA RNA 0 135 1 9 714 1246 0 0 0 chrUextra 16963765 16963900 -12040756 - 5S_DM RNA RNA 0 135 1 9 714 6324 13 0 0 chrUextra 16964097 16964799 -12039857 + Copia2_I LTR Copia 1153 1854 -2308 9 714 6415 3 0 0 chrUextra 16964899 16965599 -12039057 - R1_DM LINE R1 -2995 2361 1662 9 714 3470 3 0 0 chrUextra 16965701 16966077 -12038579 - LSU-rRNA_Dme rRNA rRNA -885 3015 2640 9 714 2960 3 3 3 chrUextra 16966075 16966403 -12038253 - R1_DM LINE R1 0 5356 5029 9 714 6457 0 1 3 chrUextra 16966505 16967205 -12037451 + LSU-rRNA_Dme rRNA rRNA 2515 3213 -687 9 714 4786 10 1 86 chrUextra 16967329 16968007 -12036649 + DM176_I LTR Gypsy 1 621 -5799 9 714 2297 192 96 25 chrUextra 16968107 16968808 -12035848 + SAR_DM Satellite Satellite 1 750 -203 9 714 2156 92 106 25 chrUextra 16968909 16969231 -12035425 + Gypsy12_I LTR Gypsy 4679 5026 -520 9 714 937 42 8 0 chrUextra 16969228 16969346 -12035310 + Gypsy12_I LTR Gypsy 5428 5546 0 9 714 1315 171 12 24 chrUextra 16969360 16969611 -12035045 + Gypsy12_LTR LTR Gypsy 13 260 -2076 9 714 6117 24 1 0 chrUextra 16969712 16970413 -12034243 - R1_DM LINE R1 -286 5070 4369 9 714 319 294 31 8 chrUextra 16970513 16970640 -12034016 + Invader4_I LTR Gypsy 6 135 -2278 9 714 432 310 41 42 chrUextra 16970692 16971028 -12033628 + Invader1_I LTR Gypsy 888 1226 -1960 9 714 5428 72 7 4 chrUextra 16971315 16972017 -12032639 + BS LINE Jockey 572 1275 -3851 9 714 862 291 24 32 chrUextra 16972428 16972818 -12031838 - Invader1_I LTR Gypsy -622 2564 2195 9 714 5978 29 10 1 chrUextra 16972919 16973621 -12031035 + R1_DM LINE R1 2123 2830 -2526 9 714 1465 0 0 0 chrUextra 16974525 16974690 -12029966 + Copia_LTR LTR Copia 112 276 0 9 714 4980 0 0 0 chrUextra 16974690 16975225 -12029431 + Copia_I LTR Copia 1 535 -4058 9 714 2330 196 19 14 chrUextra 16976129 16976829 -12027827 - SAR_DM Satellite Satellite -879 703 1 9 714 1458 0 0 0 chrUextra 16976929 16977086 -12027570 - LSU-rRNA_Dme rRNA rRNA -3743 157 1 9 714 21 95 0 0 chrUextra 16977098 16977161 -12027495 + AT_rich Low_complexity Low_complexity 1 63 0 9 714 34 24 0 0 chrUextra 16977374 16977415 -12027241 + AT_rich Low_complexity Low_complexity 1 41 0 9 714 5652 31 3 30 chrUextra 16977731 16978433 -12026223 - CIRCE LINE Composite -3605 2751 2069 9 714 6458 1 0 0 chrUextra 16978533 16979235 -12025421 + R1_DM LINE R1 1978 2679 -2677 9 714 6291 20 1 0 chrUextra 16979335 16980037 -12024619 - Copia2_I LTR Copia -1962 2200 1498 9 714 6537 0 1 0 chrUextra 16980137 16980839 -12023817 + NOMAD_I LTR Gypsy 1190 1892 -4680 9 714 1940 109 4 4 chrUextra 16980939 16981207 -12023449 - R1_DM LINE R1 -3981 1375 1108 9 714 2092 119 82 70 chrUextra 16981204 16981630 -12023026 - R1_DM LINE R1 -4646 710 280 9 714 5109 14 9 47 chrUextra 16981741 16982047 -12022609 - DM176_I LTR Gypsy -5598 822 537 9 714 208 28 26 53 chrUextra 16982047 16982085 -12022571 + (TTA)n Simple_repeat Simple_repeat 3 39 0 9 714 5109 14 9 47 chrUextra 16982085 16982443 -12022213 - DM176_I LTR Gypsy -5884 536 183 9 714 6042 1 0 3 chrUextra 16983351 16984047 -12020609 + DM176_I LTR Gypsy 873 1566 -4854 9 714 6506 0 3 1 chrUextra 16984949 16985651 -12019005 + LSU-rRNA_Dme rRNA rRNA 3091 3793 -107 9 714 6467 1 3 1 chrUextra 16985751 16986453 -12018203 - SSU-rRNA_Dme rRNA rRNA -746 1249 547 9 714 5675 31 54 0 chrUextra 16986553 16987255 -12017401 + ROO_I LTR Pao 4319 5058 -3198 9 714 2826 59 57 0 chrUextra 16987685 16988056 -12016600 - PROTOP_A DNA P 0 1105 714 9 714 6277 14 1 0 chrUextra 16988157 16988859 -12015797 - DM1731_I LTR Copia -2886 1090 388 9 714 3659 9 9 5 chrUextra 16989766 16990214 -12014442 + STALKER4_I LTR Gypsy 6081 6530 0 9 714 2220 8 8 0 chrUextra 16990214 16990463 -12014193 + STALKER4_LTR LTR Gypsy 1 251 -151 9 714 2743 81 81 7 chrUextra 16990564 16990996 -12013660 - TRANSIB2 DNA Transib -186 2658 1810 9 714 6446 3 1 3 chrUextra 16991365 16992067 -12012589 + SSU-rRNA_Dme rRNA rRNA 980 1680 -315 9 714 6281 17 1 0 chrUextra 16992167 16992869 -12011787 - STALKER4_I LTR Gypsy -2169 4361 3659 9 714 6537 0 1 0 chrUextra 16992971 16993671 -12010985 - LSU-rRNA_Dme rRNA rRNA -459 3441 2741 9 714 3174 3 3 0 chrUextra 16993771 16994118 -12010538 + R1_DM LINE R1 5009 5356 0 9 714 3310 3 0 0 chrUextra 16994116 16994473 -12010183 + LSU-rRNA_Dme rRNA rRNA 2640 2996 -904 9 714 268 196 0 19 chrUextra 16994614 16994666 -12009990 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 714 268 196 0 19 chrUextra 16994706 16994758 -12009898 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 714 3848 0 5 0 chrUextra 16994859 16995275 -12009381 - LSU-rRNA_Dme rRNA rRNA 0 3900 3483 9 714 3028 186 30 19 chrUextra 16995375 16996072 -12008584 + SAR_DM Satellite Satellite 181 885 -587 9 714 5259 73 4 0 chrUextra 16996177 16996879 -12007777 + TART LINE telomeric 434 1138 -13339 9 714 981 0 0 0 chrUextra 16996979 16997084 -12007572 + LSU-rRNA_Dme rRNA rRNA 2528 2632 -1268 9 714 5411 5 3 0 chrUextra 16997084 16997681 -12006975 + R1_DM LINE R1 1 599 -4757 9 714 235 309 51 51 chrUextra 16999079 16999256 -12005400 - Gypsy6_I LTR Gypsy -2298 4714 4538 9 714 22 0 0 0 chrUextra 16999261 16999283 -12005373 + AT_rich Low_complexity Low_complexity 1 22 0 9 714 1254 113 0 119 chrUextra 16999385 16999637 -12005019 - DIVER_LTR LTR Pao -2 222 1 9 714 3130 39 0 0 chrUextra 16999637 17000000 -12004656 - DIVER_I LTR Pao 0 5643 5281 9 714 700 35 0 0 chrUextra 17000000 17000087 -12004569 - DIVER_I LTR Pao -363 5280 5194 9 714 5513 4 1 4 chrUextra 17000187 17000889 -12003767 + STALKER4_I LTR Gypsy 5827 6526 -4 9 714 5951 3 0 1 chrUextra 17000989 17001691 -12002965 + FW_DM LINE Jockey 1124 1824 -2868 9 714 5889 1 0 1 chrUextra 17001791 17002493 -12002163 + STALKER4_I LTR Gypsy 5474 6174 -356 9 714 6151 1 1 0 chrUextra 17002593 17003295 -12001361 + LSU-rRNA_Dme rRNA rRNA 3049 3751 -149 9 714 5039 55 13 16 chrUextra 17003395 17004097 -12000559 + R1_DM LINE R1 220 919 -4437 9 714 2792 188 8 6 chrUextra 17004205 17004862 -11999794 - SAR_DM Satellite Satellite -620 852 195 9 714 803 100 0 0 chrUextra 17004769 17004899 -11999757 + ARS406_DM Unknown Unknown 1 130 -223 9 714 3009 151 23 42 chrUextra 17004999 17005698 -11998958 - SAR_DM Satellite Satellite -485 987 302 9 714 2119 129 121 49 chrUextra 17005828 17006503 -11998153 + TAHRE LINE telomeric 10013 10451 -12 9 714 5841 11 3 1 chrUextra 17006603 17007305 -11997351 + Invader2_I LTR Gypsy 632 1334 -3258 9 714 3148 159 12 12 chrUextra 17007405 17008086 -11996570 - SAR_DM Satellite Satellite -466 1006 326 9 714 5876 16 1 0 chrUextra 17008207 17008909 -11995747 - BS LINE Jockey -3608 1518 816 9 714 1314 0 0 6 chrUextra 17009009 17009166 -11995490 - BLOOD_I LTR Gypsy -6457 156 1 9 714 3200 5 45 0 chrUextra 17009166 17009379 -11995277 - BLOOD_LTR LTR Gypsy 0 399 187 9 714 180 0 0 0 chrUextra 17009379 17009399 -11995257 + (GA)n Simple_repeat Simple_repeat 2 21 0 9 714 3200 5 45 0 chrUextra 17009399 17009567 -11995089 - BLOOD_LTR LTR Gypsy -213 186 2 9 714 2486 67 0 6 chrUextra 17009811 17010156 -11994500 + HOBO DNA hAT 604 946 -2070 9 714 2304 75 8 8 chrUextra 17010161 17010513 -11994143 + HOBO DNA hAT 1100 1451 -1565 9 714 2054 81 27 6 chrUextra 17010632 17010966 -11993690 + TART LINE telomeric 9637 9977 -4500 9 714 2208 93 6 40 chrUextra 17010967 17011314 -11993342 + TART LINE telomeric 10144 10478 -3999 9 714 866 0 9 0 chrUextra 17011415 17011520 -11993136 - R2_DM LINE R2 -3500 107 2 9 714 5212 2 0 0 chrUextra 17011519 17012117 -11992539 - LSU-rRNA_Dme rRNA rRNA -1351 2549 1952 9 714 6050 4 0 3 chrUextra 17012217 17012919 -11991737 + LSU-rRNA_Dme rRNA rRNA 3195 3894 -6 9 714 1072 288 41 46 chrUextra 17013039 17013716 -11990940 + SAR_DM Satellite Satellite 428 1101 -371 9 714 5903 6 1 3 chrUextra 17013821 17014523 -11990133 - R1_DM LINE R1 -879 4477 3777 9 714 468 118 0 0 chrUextra 17014704 17014780 -11989876 - DNAREP1_DM LINE Penelope 0 594 519 9 714 291 203 31 0 chrUextra 17014807 17014871 -11989785 - DNAREP1_DM LINE Penelope -510 84 19 9 714 317 0 0 0 chrUextra 17015425 17015467 -11989189 + NTS_DM Other Other 92 133 -107 9 714 1438 15 20 20 chrUextra 17015467 17015670 -11988986 + NTS_DM Other Other 38 240 0 9 714 709 24 0 0 chrUextra 17015670 17015752 -11988904 + NTS_DM Other Other 1 82 -158 9 714 1582 129 40 76 chrUextra 17015752 17016122 -11988534 - Gypsy6_LTR LTR Gypsy 0 407 51 9 714 2724 197 10 50 chrUextra 17016230 17016926 -11987730 + Stalker2_I LTR Gypsy 3648 4315 -3087 9 714 636 113 0 0 chrUextra 17017029 17017135 -11987521 - ARS406_DM Unknown Unknown -247 106 1 9 714 3051 178 6 9 chrUextra 17017042 17017729 -11986927 + SAR_DM Satellite Satellite 195 879 -593 9 714 2397 203 53 10 chrUextra 17017831 17018527 -11986129 - SAR_DM Satellite Satellite -480 992 267 9 714 2872 195 7 9 chrUextra 17018642 17019331 -11985325 + SAR_DM Satellite Satellite 192 879 -593 9 714 2937 184 7 10 chrUextra 17019440 17020134 -11984522 + SAR_DM Satellite Satellite 212 903 -569 9 714 5932 0 0 0 chrUextra 17020237 17020939 -11983717 + Copia_I LTR Copia 2998 3699 -894 9 714 3540 17 112 1 chrUextra 17021039 17021741 -11982915 + R1_DM LINE R1 3387 4166 -1190 9 714 6086 0 0 0 chrUextra 17021841 17022543 -11982113 - Invader2_I LTR Gypsy -3193 1399 698 9 714 5469 28 6 20 chrUextra 17022643 17023345 -11981311 + CIRCE LINE Composite 2706 3397 -2959 9 714 5706 24 0 0 chrUextra 17023445 17024147 -11980509 + FW_DM LINE Jockey 2901 3602 -1090 9 714 4832 51 40 0 chrUextra 17024247 17024949 -11979707 + DM297_I LTR Gypsy 3416 4145 -2022 9 714 6041 3 0 0 chrUextra 17025049 17025751 -11978905 + DMRT1A LINE R1 2180 2881 -2302 9 714 1620 13 0 0 chrUextra 17026657 17027293 -11977363 + (TAGA)n Simple_repeat Simple_repeat 1 636 0 9 714 225 108 0 0 chrUextra 17027318 17027355 -11977301 + (ACCG)n Simple_repeat Simple_repeat 1 37 0 9 714 3423 2 1 37 chrUextra 17027455 17028157 -11976499 - DM412B_LTR LTR Gypsy -142 429 1 9 714 5999 1 1 0 chrUextra 17028257 17028959 -11975697 + DOC LINE Jockey 1156 1858 -2867 9 714 6125 1 0 0 chrUextra 17029059 17029761 -11974895 + FW_DM LINE Jockey 3406 4107 -585 9 714 3013 178 9 9 chrUextra 17029862 17030553 -11974103 - SAR_DM Satellite Satellite -587 885 195 9 714 5458 29 75 0 chrUextra 17030663 17031365 -11973291 + R1_DM LINE R1 1867 2621 -2735 9 714 3802 5 0 0 chrUextra 17031465 17031909 -11972747 - DMRT1B LINE R1 -2362 2821 2378 9 714 2039 39 0 0 chrUextra 17031911 17032167 -11972489 + R1_DM LINE R1 4583 4838 -518 9 714 225 0 0 0 chrUextra 17032267 17032292 -11972364 + (TCTTG)n Simple_repeat Simple_repeat 2 26 0 9 714 736 298 59 28 chrUextra 17033073 17033766 -11970890 - TABOR_I LTR Gypsy -3595 3001 2285 9 714 2593 3 0 0 chrUextra 17034673 17034971 -11969685 - LSU-rRNA_Dme rRNA rRNA -963 2937 2640 9 714 3488 2 0 2 chrUextra 17034969 17035375 -11969281 - R1_DM LINE R1 0 5356 4952 9 714 2938 185 10 10 chrUextra 17035476 17036176 -11968480 + SAR_DM Satellite Satellite 212 911 -561 9 714 5965 3 1 4 chrUextra 17036277 17036979 -11967677 - SSU-rRNA_Dme rRNA rRNA -452 1543 844 9 714 6018 3 1 3 chrUextra 17037079 17037781 -11966875 + SSU-rRNA_Dme rRNA rRNA 662 1362 -633 9 714 1620 0 0 0 chrUextra 17037881 17038136 -11966520 + (AGATG)n Simple_repeat Simple_repeat 1 255 0 9 714 1305 51 0 0 chrUextra 17038138 17038316 -11966340 + (ACATG)n Simple_repeat Simple_repeat 1 178 0 9 714 1620 0 4 0 chrUextra 17038316 17038583 -11966073 + (AGATG)n Simple_repeat Simple_repeat 1 267 0 9 89 5202 29 65 3 chrUextra 17038683 17039385 -11965271 - Transib5 DNA Transib -1262 1739 994 9 715 5387 1 0 66 chrUextra 17039486 17040187 -11964469 - LSU-rRNA_Dme rRNA rRNA -1537 2363 1709 9 715 430 188 0 0 chrUextra 17040290 17040375 -11964281 - SAR_DM Satellite Satellite -425 1047 963 9 715 359 78 0 0 chrUextra 17040386 17040437 -11964219 + ARS406_DM Unknown Unknown 136 186 -167 9 715 2322 175 49 13 chrUextra 17040393 17040989 -11963667 - SAR_DM Satellite Satellite -610 862 246 9 715 301 212 0 23 chrUextra 17041091 17041178 -11963478 + XDMR_DM Unknown Unknown 267 351 -9 9 715 2877 174 14 26 chrUextra 17041101 17041791 -11962865 - SAR_DM Satellite Satellite -354 1118 437 9 715 370 115 0 90 chrUextra 17041891 17041958 -11962698 - HETRP_DM Satellite Satellite -294 1578 1518 9 715 501 208 8 16 chrUextra 17042102 17042224 -11962432 - HETRP_DM Satellite Satellite -203 1669 1549 9 715 300 27 0 0 chrUextra 17042224 17042261 -11962395 + (TC)n Simple_repeat Simple_repeat 2 38 0 9 715 711 188 58 52 chrUextra 17042385 17042576 -11962080 - HETRP_DM Satellite Satellite -197 1675 1484 9 715 3424 32 38 50 chrUextra 17043495 17044017 -11960639 - NINJA_I LTR Pao -5495 516 1 9 715 1370 50 6 6 chrUextra 17044017 17044197 -11960459 - NINJA_LTR LTR Pao 0 317 138 9 715 5695 34 0 1 chrUextra 17044297 17044999 -11959657 - R2_DM LINE R2 -826 2781 2081 9 715 5250 40 81 1 chrUextra 17045099 17045801 -11958855 - R1_DM LINE R1 -2091 3265 2508 9 715 6043 0 4 0 chrUextra 17045901 17046603 -11958053 + TART LINE telomeric 9870 10574 -3903 9 715 3063 177 9 9 chrUextra 17046711 17047399 -11957257 - SAR_DM Satellite Satellite -416 1056 369 9 715 255 132 0 19 chrUextra 17047512 17047566 -11957090 + DMLTR5 LTR Gypsy 214 266 0 9 715 351 49 65 16 chrUextra 17047565 17047627 -11957029 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 715 249 128 0 21 chrUextra 17047649 17047697 -11956959 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 715 1111 18 24 24 chrUextra 17048307 17048477 -11956179 + NTS_DM Other Other 71 240 0 9 715 1734 21 17 17 chrUextra 17048477 17048717 -11955939 + NTS_DM Other Other 1 240 0 9 715 1850 4 17 13 chrUextra 17048717 17048956 -11955700 + NTS_DM Other Other 1 240 0 9 715 435 0 19 0 chrUextra 17048956 17049009 -11955647 + NTS_DM Other Other 1 54 -186 9 715 5133 68 17 0 chrUextra 17049109 17049811 -11954845 + TART_B1 LINE telomeric 2843 3556 -7098 9 715 3073 47 2 2 chrUextra 17049911 17050314 -11954342 + R1_DM LINE R1 988 1390 -3966 9 715 2341 24 3 0 chrUextra 17050315 17050613 -11954043 - FW_DM LINE Jockey -2 4690 4392 9 715 58 15 0 0 chrUextra 17050886 17050951 -11953705 + AT_rich Low_complexity Low_complexity 1 65 0 9 715 21 36 0 0 chrUextra 17051293 17051321 -11953335 + AT_rich Low_complexity Low_complexity 1 28 0 9 715 2165 181 8 12 chrUextra 17051517 17052014 -11952642 - SAR_DM Satellite Satellite -482 990 496 9 715 938 121 11 11 chrUextra 17052029 17052204 -11952452 - SAR_DM Satellite Satellite -569 903 729 9 715 28 48 0 0 chrUextra 17052366 17052408 -11952248 + AT_rich Low_complexity Low_complexity 1 42 0 9 715 5842 9 1 0 chrUextra 17053119 17053820 -11950836 - STALKER4_I LTR Gypsy -4355 2175 1474 9 715 5921 13 4 0 chrUextra 17053920 17054621 -11950035 - Copia2_I LTR Copia -1604 2558 1855 9 715 2917 183 7 11 chrUextra 17054726 17055421 -11949235 - SAR_DM Satellite Satellite -569 903 212 9 715 6037 1 0 0 chrUextra 17055522 17056223 -11948433 - R1_DM LINE R1 -3460 1896 1196 9 715 6074 4 0 0 chrUextra 17056323 17057024 -11947632 - R2_DM LINE R2 -322 3285 2585 9 715 1177 23 22 22 chrUextra 17057124 17057305 -11947351 + NTS_DM Other Other 60 240 0 9 715 1756 17 17 17 chrUextra 17057305 17057545 -11947111 + NTS_DM Other Other 1 240 0 9 715 1713 25 17 17 chrUextra 17057545 17057785 -11946871 + NTS_DM Other Other 1 240 0 9 715 332 25 0 0 chrUextra 17057785 17057825 -11946831 + NTS_DM Other Other 1 40 -200 9 715 4241 20 84 0 chrUextra 17057925 17058626 -11946030 + FW_DM LINE Jockey 1090 1849 -2843 9 715 5866 9 0 0 chrUextra 17058726 17059427 -11945229 - STALKER4_I LTR Gypsy -3841 2689 1989 9 715 2945 0 3 0 chrUextra 17059527 17059867 -11944789 + R1_DM LINE R1 5016 5356 0 9 715 3108 3 3 0 chrUextra 17059865 17060228 -11944428 + LSU-rRNA_Dme rRNA rRNA 2640 3003 -897 9 715 6003 1 0 0 chrUextra 17060328 17061029 -11943627 - MDG3_I LTR Gypsy -701 4285 3585 9 715 4395 142 9 0 chrUextra 17061133 17061830 -11942826 - Gypsy_I LTR Gypsy -2313 4194 3492 9 715 5172 43 60 1 chrUextra 17062731 17063432 -11941224 + R1_DM LINE R1 623 1364 -3992 9 715 6075 6 0 0 chrUextra 17063532 17064233 -11940423 + R2_DM LINE R2 2658 3358 -249 9 715 189 147 0 0 chrUextra 17064520 17064554 -11940102 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 9 715 47 0 0 0 chrUextra 17064893 17064940 -11939716 + AT_rich Low_complexity Low_complexity 1 47 0 9 715 583 13 0 0 chrUextra 17064956 17065034 -11939622 - Gypsy4_I LTR Gypsy -5911 377 300 9 715 2848 173 33 21 chrUextra 17065137 17065835 -11938821 - SAR_DM Satellite Satellite -511 961 256 9 715 3487 0 0 0 chrUextra 17065937 17066333 -11938323 - LSU-rRNA_Dme rRNA rRNA -1717 2183 1788 9 715 2076 0 8 8 chrUextra 17066377 17066636 -11938020 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1530 9 715 4648 14 100 1 chrUextra 17066736 17067437 -11937219 - R1_DM LINE R1 -1088 4268 3499 9 715 3949 91 23 23 chrUextra 17067537 17068238 -11936418 - TART LINE telomeric -4593 9884 9184 9 715 2386 159 19 27 chrUextra 17068338 17069840 -11934816 + DMSAT6 Satellite Satellite 1 1489 -285 9 715 5797 7 0 1 chrUextra 17069940 17070641 -11934015 - Invader2_I LTR Gypsy -2842 1750 1051 9 715 1083 264 41 23 chrUextra 17070942 17071442 -11933214 + G_DM LINE Jockey 322 853 -3493 9 715 3138 181 5 9 chrUextra 17071542 17072243 -11932413 + SAR_DM Satellite Satellite 1 697 -396 9 715 226 75 24 24 chrUextra 17072345 17072386 -11932270 + ARS406_DM Unknown Unknown 149 189 -164 9 715 2319 160 22 4 chrUextra 17072353 17073042 -11931614 - SAR_DM Satellite Satellite -625 701 1 9 715 5576 36 0 1 chrUextra 17073144 17073845 -11930811 + MDG1_I LTR Gypsy 3501 4200 -2396 9 715 4296 96 13 30 chrUextra 17073945 17074641 -11930015 - TART LINE telomeric -6945 7532 6849 9 715 3587 9 2 2 chrUextra 17074746 17075198 -11929458 + IDEFIX_I LTR Gypsy 5177 5628 0 9 715 1924 4 76 0 chrUextra 17075198 17075447 -11929209 + IDEFIX_LTR LTR Gypsy 1 268 -326 9 715 1396 0 0 0 chrUextra 17075547 17075710 -11928946 + QUASIMODO_LTR LTR Gypsy 496 658 0 9 715 4249 4 7 39 chrUextra 17075710 17076248 -11928408 + QUASIMODO_I LTR Gypsy 1 521 -5539 9 715 3056 183 6 14 chrUextra 17076348 17077049 -11927607 + SAR_DM Satellite Satellite 1 695 -396 9 715 5903 13 1 1 chrUextra 17077149 17077850 -11926806 + R2_DM LINE R2 2506 3206 -401 9 715 930 0 0 0 chrUextra 17077950 17078058 -11926598 + 5S_DM RNA RNA 28 135 0 9 715 1167 7 0 0 chrUextra 17078299 17078434 -11926222 + 5S_DM RNA RNA 1 135 0 9 715 5935 10 26 0 chrUextra 17078751 17079452 -11925204 + Invader6_I LTR Gypsy 1291 2009 -2090 9 715 270 188 16 0 chrUextra 17079552 17079616 -11925040 + XDMR Unknown Unknown 297 361 0 9 715 2909 178 7 19 chrUextra 17079561 17080253 -11924403 - SAR_DM Satellite Satellite -353 1119 436 9 715 5992 1 0 0 chrUextra 17080353 17081054 -11923602 - LSU-rRNA_Dme rRNA rRNA -2723 1177 477 9 715 4762 5 11 0 chrUextra 17081154 17081716 -11922940 + Copia2_I LTR Copia 556 1123 -3039 9 715 1157 7 7 0 chrUextra 17081711 17081855 -11922801 + Copia2_I LTR Copia 1233 1377 -2785 9 715 6053 4 0 1 chrUextra 17081955 17082656 -11922000 + DM1731_I LTR Copia 2796 3495 -481 9 715 5777 10 7 0 chrUextra 17082756 17083457 -11921199 - STALKER4_I LTR Gypsy -3953 2577 1872 9 715 5902 3 0 0 chrUextra 17083557 17084258 -11920398 + ROO_I LTR Pao 2742 3442 -4814 9 715 922 168 102 15 chrUextra 17084697 17084902 -11919754 + DMLTR5 LTR Gypsy 44 266 0 9 715 351 49 65 16 chrUextra 17084901 17084963 -11919693 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 715 241 176 0 19 chrUextra 17084977 17085029 -11919627 + HMSBEAGLE_I LTR Gypsy 171 221 -6308 9 715 5989 3 1 0 chrUextra 17086761 17087462 -11917194 - LSU-rRNA_Dme rRNA rRNA -2619 1281 580 9 715 4574 10 0 51 chrUextra 17087562 17088191 -11916465 - ROVER-I_DM LTR Gypsy -5440 1144 548 9 715 619 0 0 0 chrUextra 17088191 17088263 -11916393 - ROVER-I_DM LTR Gypsy -6339 245 174 9 715 2491 7 0 0 chrUextra 17088363 17088652 -11916004 - SSU-rRNA_Dme rRNA rRNA -1706 289 1 9 715 32 0 0 0 chrUextra 17088784 17088816 -11915840 + AT_rich Low_complexity Low_complexity 1 32 0 9 715 5855 9 0 0 chrUextra 17089164 17089865 -11914791 + STALKER4_I LTR Gypsy 2389 3089 -3441 9 715 5747 7 0 0 chrUextra 17089965 17090666 -11913990 - QUASIMODO_I LTR Gypsy -830 5230 4530 9 715 285 51 0 0 chrUextra 17090766 17090805 -11913851 + (CAAGA)n Simple_repeat Simple_repeat 5 43 0 9 715 1463 0 6 0 chrUextra 17091567 17091738 -11912918 - SSU-rRNA_Dme rRNA rRNA -1823 172 1 9 715 32 0 0 0 chrUextra 17091871 17091903 -11912753 + AT_rich Low_complexity Low_complexity 1 32 0 9 715 25 0 0 0 chrUextra 17092232 17092257 -11912399 + AT_rich Low_complexity Low_complexity 1 25 0 9 715 5112 23 76 3 chrUextra 17092370 17093069 -11911587 + R1_DM LINE R1 3824 4573 -783 9 715 5771 23 3 0 chrUextra 17093169 17093870 -11910786 + R1_DM LINE R1 4218 4920 -436 9 715 207 42 61 41 chrUextra 17093980 17094029 -11910627 + (TTTTA)n Simple_repeat Simple_repeat 3 52 0 9 715 1176 28 0 0 chrUextra 17094051 17094195 -11910461 + (TTA)n Simple_repeat Simple_repeat 3 146 0 9 715 519 95 53 0 chrUextra 17094203 17094298 -11910358 + Jockey2 LINE Jockey 3321 3420 -8 9 715 723 111 275 0 chrUextra 17094327 17094498 -11910158 - DNAREP1_DM LINE Penelope -175 419 202 9 715 2345 103 17 16 chrUextra 17094774 17095472 -11909184 + DMSAT6 Satellite Satellite 1 698 -51 9 715 5998 1 0 0 chrUextra 17095572 17096273 -11908383 - ROO_I LTR Pao -6320 1936 1236 9 715 1924 13 4 0 chrUextra 17096374 17096604 -11908052 + Copia2_I LTR Copia 893 1123 -3039 9 715 3994 11 0 0 chrUextra 17096599 17097074 -11907582 + Copia2_I LTR Copia 1233 1707 -2455 9 715 1748 144 24 162 chrUextra 17097176 17097872 -11906784 - BATUMI_I LTR Pao -6802 1161 562 9 715 5715 27 0 0 chrUextra 17097975 17098672 -11905984 - R1_DM LINE R1 -1781 3575 2879 9 715 2912 171 30 20 chrUextra 17098777 17099474 -11905182 - SAR_DM Satellite Satellite -523 949 246 9 715 5843 6 6 7 chrUextra 17100378 17101079 -11903577 + DM1731_I LTR Copia 3160 3859 -117 9 715 240 267 0 0 chrUextra 17101399 17101459 -11903197 + TV1I LTR Gypsy 5903 5962 -1 9 715 36 55 0 52 chrUextra 17102032 17102148 -11902508 + AT_rich Low_complexity Low_complexity 1 110 0 9 715 4007 2 0 2 chrUextra 17102221 17102681 -11901975 + SSU-rRNA_Dme rRNA rRNA 1 459 -1536 9 715 1914 5 0 0 chrUextra 17102781 17103001 -11901655 - Invader2_LTR LTR Gypsy -46 220 1 9 715 3855 0 0 0 chrUextra 17103001 17103482 -11901174 - Invader2_I LTR Gypsy 0 4592 4112 9 715 262 191 43 43 chrUextra 17104429 17104544 -11900112 + T-rich Low_complexity Low_complexity 3 117 0 9 715 208 286 8 31 chrUextra 17104727 17104857 -11899799 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 9 715 30 0 0 0 chrUextra 17104900 17104930 -11899726 + AT_rich Low_complexity Low_complexity 1 30 0 9 715 236 231 0 0 chrUextra 17105018 17105083 -11899573 - ROVER-I_DM LTR Gypsy -1746 4838 4774 9 715 5761 17 3 0 chrUextra 17105184 17105885 -11898771 - FW_DM LINE Jockey -957 3735 3033 9 715 2923 175 11 11 chrUextra 17105991 17106686 -11897970 - SAR_DM Satellite Satellite -479 993 299 9 715 2733 195 36 20 chrUextra 17106786 17107487 -11897169 + SAR_DM Satellite Satellite 1 712 -208 9 715 1065 101 0 0 chrUextra 17107587 17107736 -11896920 + Gypsy12_I LTR Gypsy 1673 1821 -3725 9 715 3715 90 47 14 chrUextra 17107733 17108288 -11896368 + Gypsy12_I LTR Gypsy 4465 5037 -509 9 715 2006 271 4 30 chrUextra 17108394 17109089 -11895567 + ROVER-I_DM LTR Gypsy 832 1508 -5076 9 715 3452 62 0 2 chrUextra 17109189 17109677 -11894979 - BATUMI_I LTR Pao -174 7789 7303 9 715 1444 42 11 0 chrUextra 17109700 17109890 -11894766 + BATUMI_I LTR Pao 6427 6618 -1345 9 715 495 94 33 124 chrUextra 17109992 17110113 -11894543 - Gypsy12_I LTR Gypsy -5410 136 27 9 715 1566 185 34 26 chrUextra 17110083 17110466 -11894190 - Gypsy12_LTR LTR Gypsy -1938 398 13 9 715 1321 90 89 9 chrUextra 17110478 17110691 -11893965 - Gypsy12_I LTR Gypsy 0 5546 5317 9 715 496 15 30 0 chrUextra 17110791 17110858 -11893798 - NTS_DM Other Other -134 106 38 9 715 870 9 0 27 chrUextra 17110858 17110970 -11893686 - NTS_DM Other Other -107 133 25 9 715 22 56 0 0 chrUextra 17110996 17111032 -11893624 + AT_rich Low_complexity Low_complexity 1 36 0 9 715 255 125 0 0 chrUextra 17111045 17111085 -11893571 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 246 150 0 0 chrUextra 17111128 17111168 -11893488 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 27 29 0 0 chrUextra 17111173 17111207 -11893449 + AT_rich Low_complexity Low_complexity 1 34 0 9 715 1868 0 0 0 chrUextra 17111279 17111492 -11893164 - LSU-rRNA_Dme rRNA rRNA 0 3900 3688 9 715 423 101 0 0 chrUextra 17111592 17111661 -11892995 - ARS406_DM Unknown Unknown -284 69 1 9 715 3146 183 10 9 chrUextra 17111599 17112293 -11892363 + SAR_DM Satellite Satellite 224 918 -554 9 715 21 89 0 0 chrUextra 17112712 17112768 -11891888 + AT_rich Low_complexity Low_complexity 1 56 0 9 715 2726 0 3 7 chrUextra 17112787 17113094 -11891562 - SSU-rRNA_Dme rRNA rRNA 0 1995 1690 9 715 3088 105 95 47 chrUextra 17113194 17113765 -11890891 + Gypsy12_I LTR Gypsy 198 795 -4751 9 715 525 60 0 0 chrUextra 17113767 17113834 -11890822 + Gypsy12_I LTR Gypsy 1363 1429 -4117 9 715 378 133 0 16 chrUextra 17113834 17113895 -11890761 + Gypsy12_I LTR Gypsy 457 516 -5030 9 715 6173 9 1 4 chrUextra 17113995 17114696 -11889960 + Invader1_I LTR Gypsy 2259 2957 -229 9 715 2905 200 32 12 chrUextra 17114796 17115497 -11889159 - SAR_DM Satellite Satellite -470 714 1 9 715 5952 0 10 0 chrUextra 17115597 17116298 -11888358 + ROO_I LTR Pao 474 1181 -7075 9 715 6213 4 1 0 chrUextra 17116398 17117099 -11887557 + Invader3_I LTR Gypsy 2965 3666 -1222 9 715 5957 33 0 0 chrUextra 17117202 17117900 -11886756 - DMRT1B LINE R1 -1312 3871 3174 9 715 6411 1 0 0 chrUextra 17118000 17118701 -11885955 - LSU-rRNA_Dme rRNA rRNA -514 3386 2686 9 715 6079 20 0 0 chrUextra 17119602 17120303 -11884353 - R1_DM LINE R1 -817 4539 3839 9 715 847 9 0 44 chrUextra 17120406 17120520 -11884136 - NTS_DM Other Other -107 133 25 9 715 1304 18 0 6 chrUextra 17120572 17120737 -11883919 - NTS_DM Other Other -39 201 38 9 715 907 9 0 27 chrUextra 17120737 17120849 -11883807 - NTS_DM Other Other -107 133 25 9 715 22 56 0 0 chrUextra 17120875 17120911 -11883745 + AT_rich Low_complexity Low_complexity 1 36 0 9 715 269 125 0 0 chrUextra 17120924 17120964 -11883692 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 262 150 0 0 chrUextra 17121007 17121047 -11883609 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 1515 124 8 20 chrUextra 17121204 17121459 -11883197 + Gypsy12A_LTR LTR Gypsy 2029 2280 0 9 715 2792 85 11 49 chrUextra 17121459 17121905 -11882751 + Gypsy12_I LTR Gypsy 1 429 -5117 9 715 6106 17 0 0 chrUextra 17122005 17122706 -11881950 + FW_DM LINE Jockey 537 1237 -3455 9 715 1353 0 0 0 chrUextra 17122806 17122953 -11881703 - LSU-rRNA_Dme rRNA rRNA -1966 1934 1788 9 715 4344 2 6 10 chrUextra 17122997 17123507 -11881149 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1281 9 715 6092 14 1 1 chrUextra 17123607 17124308 -11880348 + R1_DM LINE R1 3433 4133 -1223 9 715 3018 202 13 21 chrUextra 17124408 17125109 -11879547 + SAR_DM Satellite Satellite 1 695 -203 9 715 21 89 0 0 chrUextra 17125417 17125473 -11879183 + AT_rich Low_complexity Low_complexity 1 56 0 9 715 3753 0 2 5 chrUextra 17125492 17125910 -11878746 - SSU-rRNA_Dme rRNA rRNA 0 1995 1579 9 715 2615 186 8 8 chrUextra 17126016 17126711 -11877945 - SAR_DM Satellite Satellite -749 695 1 9 715 6097 23 0 0 chrUextra 17126811 17127512 -11877144 - R1_DM LINE R1 -511 4845 4145 9 715 3487 85 6 108 chrUextra 17127612 17128308 -11876348 - ROO_I LTR Pao -7072 1184 560 9 715 6218 0 0 0 chrUextra 17128413 17129114 -11875542 + ROVER-I_DM LTR Gypsy 3094 3794 -2790 9 715 1677 0 19 14 chrUextra 17129214 17129425 -11875231 + NTS_DM Other Other 29 240 0 9 715 1926 4 17 13 chrUextra 17129425 17129664 -11874992 + NTS_DM Other Other 1 240 0 9 715 1355 6 0 18 chrUextra 17129664 17129829 -11874827 + NTS_DM Other Other 1 162 -78 9 715 1733 173 38 10 chrUextra 17130024 17130716 -11873940 - SAR_DM Satellite Satellite -514 711 1 9 715 3307 36 0 0 chrUextra 17130823 17131215 -11873441 - STALKER4_LTR LTR Gypsy -10 392 1 9 715 2176 27 17 3 chrUextra 17131215 17131517 -11873139 - STALKER4_I LTR Gypsy 0 6530 6225 9 715 1411 6 0 0 chrUextra 17131617 17131773 -11872883 - LSU-rRNA_Dme rRNA rRNA -1105 2795 2640 9 715 573 0 0 0 chrUextra 17131771 17131834 -11872822 - R1_DM LINE R1 0 5356 5294 9 715 4280 2 0 0 chrUextra 17131847 17132318 -11872338 - R1_DM LINE R1 0 5356 4886 9 715 570 91 73 151 chrUextra 17132448 17132572 -11872084 + MDG1_I LTR Gypsy 6395 6531 -65 9 715 288 0 0 0 chrUextra 17132572 17132604 -11872052 + (TA)n Simple_repeat Simple_repeat 2 33 0 9 715 570 106 65 138 chrUextra 17132604 17132710 -11871946 + MDG1_I LTR Gypsy 6532 6596 0 9 715 1545 22 0 0 chrUextra 17132715 17133119 -11871537 + (TAA)n Simple_repeat Simple_repeat 1 404 0 9 715 6328 1 0 0 chrUextra 17133219 17133920 -11870736 + DOC LINE Jockey 2103 2803 -1922 9 715 6326 0 0 1 chrUextra 17134020 17134721 -11869935 + ROO_I LTR Pao 2184 2883 -5373 9 715 3259 0 5 3 chrUextra 17134821 17135191 -11869465 + LSU-rRNA_Dme rRNA rRNA 1418 1788 -2112 9 715 2641 0 0 0 chrUextra 17135235 17135522 -11869134 + LSU-rRNA_Dme rRNA rRNA 1788 2074 -1826 9 715 6075 0 1 1 chrUextra 17135622 17136323 -11868333 - ROO_I LTR Pao -2978 5278 4578 9 715 6207 1 1 0 chrUextra 17136423 17137124 -11867532 + DOC LINE Jockey 1502 2203 -2522 9 715 6145 1 1 1 chrUextra 17137224 17137925 -11866731 + ROO_I LTR Pao 3540 4240 -4016 9 715 3102 177 27 10 chrUextra 17138025 17138721 -11865935 + SAR_DM Satellite Satellite 287 994 -478 9 715 6250 6 0 0 chrUextra 17138827 17139527 -11865129 + FW_DM LINE Jockey 1549 2248 -2444 9 715 2042 49 0 0 chrUextra 17139627 17139874 -11864782 + IDEFIX_I LTR Gypsy 1628 1874 -3754 9 715 3877 20 0 0 chrUextra 17139868 17140328 -11864328 + IDEFIX_I LTR Gypsy 2009 2468 -3160 9 715 888 274 118 85 chrUextra 17140460 17141129 -11863527 - Gypsy12_LTR LTR Gypsy -1258 1078 388 9 715 3291 173 11 10 chrUextra 17141229 17141930 -11862726 - SAR_DM Satellite Satellite -515 957 256 9 715 5101 45 62 9 chrUextra 17142033 17142731 -11861925 - PROTOP DNA P -3730 750 16 9 715 3291 173 11 9 chrUextra 17142834 17143532 -11861124 + SAR_DM Satellite Satellite 369 1068 -404 9 715 23 68 0 0 chrUextra 17144070 17144114 -11860542 + AT_rich Low_complexity Low_complexity 1 44 0 9 715 26 30 0 0 chrUextra 17144160 17144193 -11860463 + AT_rich Low_complexity Low_complexity 1 33 0 9 715 707 108 0 0 chrUextra 17144435 17144546 -11860110 - ARS406_DM Unknown Unknown -242 111 1 9 715 3113 178 9 8 chrUextra 17144453 17145120 -11859536 + SAR_DM Satellite Satellite 195 862 -610 9 715 394 69 35 0 chrUextra 17145076 17145134 -11859522 - ARS406_DM Unknown Unknown -167 186 127 9 715 3193 171 30 10 chrUextra 17145234 17145924 -11858732 + SAR_DM Satellite Satellite 373 1076 -396 9 715 6191 6 1 1 chrUextra 17146035 17146736 -11857920 + R1_DM LINE R1 3522 4222 -1134 9 715 6257 9 3 0 chrUextra 17146836 17147537 -11857119 + Invader1_I LTR Gypsy 83 785 -2401 9 715 6326 6 0 0 chrUextra 17147637 17148338 -11856318 - Copia2_I LTR Copia -57 4105 3405 9 715 962 73 7 20 chrUextra 17148470 17149139 -11855517 - RSP Satellite Satellite 0 660 1 9 715 1637 5 0 0 chrUextra 17149239 17149428 -11855228 + DM176_LTR LTR Gypsy 319 507 0 9 715 3798 32 0 27 chrUextra 17149428 17149940 -11854716 + DM176_I LTR Gypsy 1 498 -5922 9 715 5746 1 1 36 chrUextra 17150040 17150741 -11853915 + LSU-rRNA_Dme rRNA rRNA 59 735 -3165 9 715 1995 177 23 8 chrUextra 17150844 17151542 -11853114 - SAR_DM Satellite Satellite -511 707 1 9 715 1141 8 0 0 chrUextra 17151642 17151767 -11852889 + R1_DM LINE R1 5232 5356 0 9 715 5245 2 0 0 chrUextra 17151769 17152343 -11852313 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 9 715 5902 9 0 1 chrUextra 17152443 17153144 -11851512 - QUASIMODO_I LTR Gypsy -2295 3765 3066 9 715 2924 178 18 22 chrUextra 17153245 17153916 -11850740 + SAR_DM Satellite Satellite 452 1119 -353 9 715 488 204 0 9 chrUextra 17153831 17153945 -11850711 - XDMR_DM Unknown Unknown 0 360 248 9 715 2888 177 9 20 chrUextra 17154045 17154707 -11849949 - SAR_DM Satellite Satellite -626 846 192 9 715 798 119 8 0 chrUextra 17154612 17154746 -11849910 + ARS406_DM Unknown Unknown 1 135 -218 9 715 6306 0 0 3 chrUextra 17155647 17156348 -11848308 + ROO_I LTR Pao 7044 7742 -514 9 715 999 9 0 8 chrUextra 17156486 17156603 -11848053 + RSP Satellite Satellite 1 116 -2 9 715 1019 78 6 17 chrUextra 17156623 17157149 -11847507 + RSP Satellite Satellite 1 520 0 9 715 1496 0 0 0 chrUextra 17157249 17157414 -11847242 - LSU-rRNA_Dme rRNA rRNA -3735 165 1 9 715 21 95 0 0 chrUextra 17157426 17157489 -11847167 + AT_rich Low_complexity Low_complexity 1 63 0 9 715 34 24 0 0 chrUextra 17157702 17157743 -11846913 + AT_rich Low_complexity Low_complexity 1 41 0 9 715 3211 166 19 17 chrUextra 17158051 17158750 -11845906 + SAR_DM Satellite Satellite 295 994 -478 9 715 6365 1 0 1 chrUextra 17158851 17159552 -11845104 - LSU-rRNA_Dme rRNA rRNA -1386 2514 1815 9 715 672 125 0 0 chrUextra 17159652 17159764 -11844892 - ARS406_DM Unknown Unknown -241 112 1 9 715 3154 183 22 4 chrUextra 17159671 17160353 -11844303 + SAR_DM Satellite Satellite 195 888 -584 9 715 395 264 111 93 chrUextra 17160608 17160888 -11843768 + Invader1_LTR LTR Gypsy 84 368 -55 9 715 3134 181 9 20 chrUextra 17161254 17161955 -11842701 - SAR_DM Satellite Satellite -372 1100 408 9 715 767 0 0 0 chrUextra 17162055 17162139 -11842517 - ROVER-I_DM LTR Gypsy -6500 84 1 9 715 1352 58 5 55 chrUextra 17162139 17162340 -11842316 - ROVER-LTR_DM LTR Gypsy 0 367 177 9 715 2082 12 0 0 chrUextra 17162508 17162756 -11841900 - G2_DM LINE Jockey 0 3102 2855 9 715 6257 4 0 1 chrUextra 17162856 17163557 -11841099 + DMRT1A LINE R1 2806 3505 -1678 9 715 6077 6 0 13 chrUextra 17163657 17164358 -11840298 - DOC LINE Jockey -3810 915 224 9 715 425 198 0 10 chrUextra 17164458 17164560 -11840096 + XDMR_DM Unknown Unknown 260 360 0 9 715 2938 185 10 22 chrUextra 17164475 17165159 -11839497 - SAR_DM Satellite Satellite -353 1119 444 9 715 5257 67 36 0 chrUextra 17165260 17165960 -11838696 + QUASIMODO_I LTR Gypsy 405 1129 -4931 9 715 5906 17 0 0 chrUextra 17166060 17166761 -11837895 - QUASIMODO_I LTR Gypsy -4521 1539 839 9 715 5298 41 38 1 chrUextra 17166861 17167514 -11837142 - R1_DM LINE R1 -3959 1397 721 9 715 301 27 0 0 chrUextra 17167525 17167562 -11837094 - R1_DM LINE R1 -4955 401 365 9 715 6337 11 0 1 chrUextra 17167662 17168363 -11836293 + R1_DM LINE R1 1701 2400 -2956 9 715 5848 16 19 0 chrUextra 17168464 17169164 -11835492 + Invader2_I LTR Gypsy 28 740 -3852 9 715 4768 70 58 12 chrUextra 17169271 17169965 -11834691 - R1_DM LINE R1 -2680 2676 2078 9 715 783 0 0 0 chrUextra 17170065 17170152 -11834504 + (GAGAA)n Simple_repeat Simple_repeat 2 88 0 9 716 6490 6 0 0 chrUextra 17170867 17171567 -11833089 - R2_DM LINE R2 -638 2969 2270 9 716 344 190 20 20 chrUextra 17171667 17171769 -11832887 + XDMR_DM Unknown Unknown 259 360 0 9 716 2909 166 48 23 chrUextra 17171683 17172368 -11832288 - SAR_DM Satellite Satellite -353 1119 418 9 716 1013 82 13 22 chrUextra 17172472 17173095 -11831561 + RSP Satellite Satellite 1 617 0 9 716 4975 36 129 0 chrUextra 17173269 17173970 -11830686 + R1_DM LINE R1 1541 2333 -3023 9 716 6276 10 0 1 chrUextra 17174070 17174771 -11829885 + STALKER4_I LTR Gypsy 1667 2366 -4164 9 716 5364 85 13 0 chrUextra 17174871 17175563 -11829093 + Gypsy12_I LTR Gypsy 4195 4895 -651 9 716 6234 3 1 1 chrUextra 17175672 17176373 -11828283 - R1_DM LINE R1 -4067 1289 589 9 716 3446 113 33 62 chrUextra 17176480 17177174 -11827482 - HETA LINE telomeric -4944 1137 254 9 716 623 0 0 0 chrUextra 17177274 17177342 -11827314 - 5S_DM RNA RNA -67 68 1 9 716 1236 7 0 0 chrUextra 17177580 17177715 -11826941 - 5S_DM RNA RNA 0 135 1 9 716 328 0 0 0 chrUextra 17177939 17177975 -11826681 - 5S_DM RNA RNA 0 135 100 9 716 3011 18 8 10 chrUextra 17178075 17178464 -11826192 + STALKER4_I LTR Gypsy 5948 6335 -195 9 716 1057 0 0 20 chrUextra 17178465 17178614 -11826042 - DOC LINE Jockey 0 4725 4580 9 716 1393 0 0 0 chrUextra 17178628 17178776 -11825880 - DOC LINE Jockey -3291 1434 1287 9 716 47 0 0 0 chrUextra 17179412 17179459 -11825197 + AT_rich Low_complexity Low_complexity 1 47 0 9 716 6259 10 0 0 chrUextra 17179677 17180378 -11824278 - STALKER4_I LTR Gypsy -3781 2749 2049 9 716 6267 9 1 0 chrUextra 17180478 17181174 -11823482 - Copia2_I LTR Copia -3465 697 1 9 716 538 50 125 0 chrUextra 17181279 17181359 -11823297 + Gypsy7_I LTR Gypsy 3245 3334 -1650 9 716 2377 35 10 0 chrUextra 17181360 17181650 -11823006 + Gypsy7_I LTR Gypsy 3615 3907 -1077 9 716 1023 170 14 28 chrUextra 17181768 17181980 -11822676 + PROTOP_B DNA P 867 1075 -78 9 716 1527 22 0 11 chrUextra 17182080 17182263 -11822393 - IDEFIX_I LTR Gypsy -5443 185 5 9 716 502 99 0 0 chrUextra 17182398 17182469 -11822187 - STALKER4_LTR LTR Gypsy -331 71 1 9 716 331 146 46 55 chrUextra 17182469 17182578 -11822078 - STALKER4_I LTR Gypsy 0 6530 6423 9 716 1459 16 11 11 chrUextra 17182593 17182781 -11821875 - IDEFIX_LTR LTR Gypsy 0 594 407 9 716 6241 20 1 0 chrUextra 17182881 17183582 -11821074 + R1_DM LINE R1 1619 2320 -3036 9 716 6431 0 4 3 chrUextra 17183682 17184383 -11820273 + NOMAD_I LTR Gypsy 5 706 -5866 9 716 6373 1 1 4 chrUextra 17184483 17185184 -11819472 - LSU-rRNA_Dme rRNA rRNA -2480 1420 722 9 716 2218 28 4 0 chrUextra 17185284 17185538 -11819118 - R1_DM LINE R1 -2680 2676 2422 9 716 1862 19 0 18 chrUextra 17185539 17185757 -11818899 - ACCORD2_LTR LTR Gypsy -1 214 1 9 716 682 70 0 0 chrUextra 17185757 17185841 -11818815 - ACCORD2_I LTR Gypsy -7 7205 7122 9 716 977 44 22 0 chrUextra 17185834 17185971 -11818685 - ACCORD2_I LTR Gypsy -5438 1774 1635 9 716 6175 24 0 1 chrUextra 17186085 17186784 -11817872 + MAX_I LTR Pao 4254 4951 -2963 9 716 5865 37 41 1 chrUextra 17186886 17187587 -11817069 + MAX_I LTR Pao 6552 7280 -634 9 716 5429 7 5 1 chrUextra 17188488 17189162 -11815494 + QUASIMODO_I LTR Gypsy 5385 6060 0 9 716 2549 88 39 23 chrUextra 17189289 17189988 -11814668 + DMSAT6 Satellite Satellite 1 710 -6 9 716 2846 176 19 54 chrUextra 17190090 17190791 -11813865 - SAR_DM Satellite Satellite -382 1090 415 9 716 225 294 99 72 chrUextra 17191199 17191503 -11813153 + Copia2_I LTR Copia 590 901 -3261 9 716 6451 4 0 3 chrUextra 17191692 17192393 -11812263 - R2_DM LINE R2 -570 3037 2339 9 716 5733 0 3 66 chrUextra 17193295 17193995 -11810661 - LSU-rRNA_Dme rRNA rRNA -1821 2079 1424 9 716 2117 9 0 0 chrUextra 17194095 17194327 -11810329 + G6_DM LINE Jockey 646 877 -1165 9 716 4138 0 53 0 chrUextra 17194321 17194796 -11809860 + G6_DM LINE Jockey 1197 1696 -346 9 716 6038 6 60 0 chrUextra 17194896 17195597 -11809059 + FW_DM LINE Jockey 2408 3150 -1542 9 716 3396 167 9 12 chrUextra 17195697 17196388 -11808268 + SAR_DM Satellite Satellite 305 993 -479 9 716 5886 15 0 40 chrUextra 17197299 17198000 -11806656 + CIRCE LINE Composite 150 822 -5534 9 716 1925 100 161 6 chrUextra 17198364 17198705 -11805951 + DNAREP1_DM LINE Penelope 201 594 0 9 716 2863 194 27 21 chrUextra 17198903 17199602 -11805054 - SAR_DM Satellite Satellite -313 1159 457 9 716 943 137 112 44 chrUextra 17199711 17199917 -11804739 + Gypsy12_LTR LTR Gypsy 1267 1486 -850 9 716 726 154 8 0 chrUextra 17199918 17200035 -11804621 + Gypsy12_LTR LTR Gypsy 2145 2262 -18 9 716 802 200 212 34 chrUextra 17200025 17200402 -11804254 + HETA LINE telomeric 5441 5884 -197 9 716 6401 1 0 0 chrUextra 17201303 17202003 -11802653 + G6_DM LINE Jockey 1016 1715 -327 9 716 6083 13 7 9 chrUextra 17202903 17203603 -11801053 + BATUMI_I LTR Pao 1850 2548 -5415 9 716 3848 114 27 26 chrUextra 17203703 17204403 -11800253 - TART LINE telomeric -4691 9786 9086 9 716 3114 191 6 6 chrUextra 17205304 17205967 -11798689 + SAR_DM Satellite Satellite 326 988 -484 9 716 246 28 28 0 chrUextra 17205967 17206003 -11798653 + MAX_LTR LTR Pao 1 37 -284 9 716 1443 17 0 11 chrUextra 17206103 17206281 -11798375 - NTS_DM Other Other -64 176 1 9 716 1972 4 17 13 chrUextra 17206281 17206520 -11798136 - NTS_DM Other Other 0 240 1 9 716 1986 0 17 13 chrUextra 17206520 17206759 -11797897 - NTS_DM Other Other 0 240 1 9 716 3509 3 5 0 chrUextra 17206905 17207293 -11797363 - LSU-rRNA_Dme rRNA rRNA -871 3029 2640 9 716 2909 3 0 0 chrUextra 17207291 17207603 -11797053 - R1_DM LINE R1 0 5356 5045 9 716 662 24 12 0 chrUextra 17207703 17207785 -11796871 + ROO_LTR LTR Pao 346 428 0 9 716 3368 25 16 31 chrUextra 17207785 17208330 -11796326 + ROO_I LTR Pao 1 640 -7616 9 716 411 137 0 0 chrUextra 17208330 17208403 -11796253 + (CAG)n Simple_repeat Simple_repeat 1 73 0 9 716 1579 17 0 0 chrUextra 17208503 17208676 -11795980 + R1_DM LINE R1 5184 5356 0 9 716 3896 63 4 4 chrUextra 17208709 17209203 -11795453 + R1_DM LINE R1 1 494 -4862 9 716 5748 29 4 0 chrUextra 17209303 17210003 -11794653 + PROTOP_A DNA P 317 1019 -86 9 716 1533 11 0 0 chrUextra 17210103 17210278 -11794378 + (TTATA)n Simple_repeat Simple_repeat 4 178 0 9 716 534 57 0 0 chrUextra 17210278 17210348 -11794308 + (TATTG)n Simple_repeat Simple_repeat 2 71 0 9 716 1434 40 0 0 chrUextra 17210364 17210541 -11794115 + (TTATA)n Simple_repeat Simple_repeat 1 177 0 9 716 1566 11 0 0 chrUextra 17210544 17210724 -11793932 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 9 716 193 22 0 98 chrUextra 17210740 17210791 -11793865 + (CATAT)n Simple_repeat Simple_repeat 3 48 0 9 716 869 20 0 0 chrUextra 17210903 17211004 -11793652 + DM176_I LTR Gypsy 6320 6420 0 9 716 4277 10 8 45 chrUextra 17211004 17211531 -11793125 + DM176_LTR LTR Gypsy 1 507 0 9 716 619 28 0 0 chrUextra 17211531 17211603 -11793053 + DM176_I LTR Gypsy 1 72 -6348 9 716 5600 13 40 0 chrUextra 17211703 17212403 -11792253 - DM176_I LTR Gypsy -12 6408 5681 9 716 6415 1 3 3 chrUextra 17212503 17213203 -11791453 + SSU-rRNA_Dme rRNA rRNA 1102 1801 -194 9 716 6374 6 0 1 chrUextra 17213303 17214003 -11790653 - R1_DM LINE R1 -73 5283 4585 9 716 5941 34 1 1 chrUextra 17214103 17214803 -11789853 + R1_DM LINE R1 2257 2956 -2400 9 716 6063 10 0 1 chrUextra 17214903 17215603 -11789053 + STALKER4_I LTR Gypsy 2859 3557 -2973 9 716 6359 7 19 0 chrUextra 17215703 17216403 -11788253 - MDG3_I LTR Gypsy -3591 1395 683 9 716 6599 0 0 0 chrUextra 17216503 17217203 -11787453 + BEL_I LTR Pao 2715 3414 -1990 9 716 3193 120 17 43 chrUextra 17217386 17217970 -11786686 + BATUMI_I LTR Pao 749 1317 -6646 9 716 6316 3 1 4 chrUextra 17218103 17218803 -11785853 - LSU-rRNA_Dme rRNA rRNA -2536 1364 667 9 716 309 175 0 0 chrUextra 17218903 17218960 -11785696 + SAR_DM Satellite Satellite 334 390 -1082 9 716 3589 11 131 8 chrUextra 17218968 17219603 -11785053 - DOC2_DM LINE Jockey 0 4793 4081 9 716 1717 5 0 0 chrUextra 17219703 17219888 -11784768 + LSU-rRNA_Dme rRNA rRNA 2393 2577 -1323 9 716 4504 2 0 2 chrUextra 17219919 17220403 -11784253 + R2_DM LINE R2 1 483 -3124 9 716 6506 0 3 0 chrUextra 17220503 17221203 -11783453 - SSU-rRNA_Dme rRNA rRNA -946 1049 348 9 716 3605 5 7 7 chrUextra 17221403 17221817 -11782839 + DM297_LTR LTR Gypsy 1 414 0 9 716 719 23 11 0 chrUextra 17221817 17221904 -11782752 + DM297_I LTR Gypsy 1 88 -6079 9 716 822 30 10 0 chrUextra 17221904 17222003 -11782653 + DM1731_LTR LTR Copia 1 100 -236 9 716 2747 189 53 16 chrUextra 17222104 17222803 -11781853 + SAR_DM Satellite Satellite 1 724 -244 9 716 6307 1 0 0 chrUextra 17222903 17223603 -11781053 - R1_DM LINE R1 -3156 2200 1501 9 716 6342 4 0 0 chrUextra 17223705 17224403 -11780253 + MAX_I LTR Pao 2348 3045 -4869 9 716 659 257 17 22 chrUextra 17224505 17224736 -11779920 - QUASIMODO_I LTR Gypsy -304 5756 5527 9 716 2328 52 299 5 chrUextra 17224728 17225203 -11779453 + PROTOP_B DNA P 176 835 -318 9 716 2670 0 0 74 chrUextra 17225303 17225641 -11779015 - LSU-rRNA_Dme rRNA rRNA -3587 313 1 9 716 21 95 0 0 chrUextra 17225653 17225716 -11778940 + AT_rich Low_complexity Low_complexity 1 63 0 9 716 34 24 0 0 chrUextra 17225929 17225970 -11778686 + AT_rich Low_complexity Low_complexity 1 41 0 9 716 461 127 0 14 chrUextra 17226903 17226975 -11777681 - Gypsy12_I LTR Gypsy -5017 529 459 9 716 1721 98 54 54 chrUextra 17226988 17227302 -11777354 - Gypsy12_I LTR Gypsy -5206 340 27 9 716 1485 186 36 21 chrUextra 17227272 17227601 -11777055 - Gypsy12_LTR LTR Gypsy -1938 398 65 9 716 6062 23 0 0 chrUextra 17227703 17228403 -11776253 - R1_DM LINE R1 -1577 3779 3080 9 716 877 98 0 0 chrUextra 17228504 17228637 -11776019 - ARS406_DM Unknown Unknown -220 133 1 9 716 2978 184 9 9 chrUextra 17228544 17229202 -11775454 + SAR_DM Satellite Satellite 195 852 -620 9 716 2382 11 0 3 chrUextra 17229303 17229588 -11775068 + IDEFIX_I LTR Gypsy 5345 5628 0 9 716 556 15 0 0 chrUextra 17229588 17229654 -11775002 + IDEFIX_LTR LTR Gypsy 1 66 -528 9 716 1021 151 33 102 chrUextra 17229742 17229986 -11774670 + DMLTR5 LTR Gypsy 40 266 0 9 716 6072 9 0 0 chrUextra 17230103 17230803 -11773853 + ROO_I LTR Pao 3168 3867 -4389 9 716 1811 276 32 44 chrUextra 17230903 17231563 -11773093 + MAX_I LTR Pao 6595 7246 -668 9 716 4675 23 7 10 chrUextra 17230998 17231575 -11773081 - BATUMI_I LTR Pao -962 7001 6427 9 716 3178 176 7 23 chrUextra 17231703 17232401 -11772255 + SAR_DM Satellite Satellite 404 1090 -382 9 716 5940 20 26 0 chrUextra 17232503 17233201 -11771455 - FW_DM LINE Jockey -962 3730 3015 9 716 5917 29 0 1 chrUextra 17234103 17234803 -11769853 - FW_DM LINE Jockey -998 3694 2996 9 716 229 324 40 40 chrUextra 17235217 17235394 -11769262 + Gypsy6_I LTR Gypsy 4538 4714 -2298 9 716 6209 0 1 0 chrUextra 17235703 17236403 -11768253 + FW_DM LINE Jockey 2716 3416 -1276 9 716 6243 1 0 0 chrUextra 17236503 17237203 -11767453 + DM176_I LTR Gypsy 2678 3377 -3043 9 716 1588 6 0 0 chrUextra 17237443 17237617 -11767039 - SSU-rRNA_Dme rRNA rRNA 0 1995 1822 9 716 3453 16 0 0 chrUextra 17237617 17238003 -11766653 - Gypsy6_LTR LTR Gypsy 0 407 22 9 716 3045 191 15 22 chrUextra 17238103 17238803 -11765853 + SAR_DM Satellite Satellite 1 695 -225 9 716 3371 165 10 11 chrUextra 17238909 17239603 -11765053 - SAR_DM Satellite Satellite -425 1047 355 9 716 746 247 53 29 chrUextra 17239704 17239963 -11764693 + Gypsy8_I LTR Gypsy 805 1036 -3311 9 716 237 247 13 13 chrUextra 17240001 17240079 -11764577 + Gypsy8_I LTR Gypsy 2746 2823 -3830 9 716 2781 13 3 0 chrUextra 17240085 17240403 -11764253 + STALKER4_LTR LTR Gypsy 1 319 -83 9 716 734 0 12 0 chrUextra 17240503 17240587 -11764069 + LSU-rRNA_Dme rRNA rRNA 3816 3900 0 9 716 22 56 0 0 chrUextra 17240659 17240695 -11763961 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 262 150 0 0 chrUextra 17240700 17240740 -11763916 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 262 150 0 0 chrUextra 17240792 17240832 -11763824 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 262 150 0 0 chrUextra 17240884 17240924 -11763732 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 269 125 0 0 chrUextra 17240967 17241007 -11763649 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 22 56 0 0 chrUextra 17241020 17241056 -11763600 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 907 9 0 27 chrUextra 17241082 17241194 -11763462 + NTS_DM Other Other 25 133 -107 9 716 3095 183 9 19 chrUextra 17241303 17242003 -11762653 - SAR_DM Satellite Satellite -371 1101 409 9 716 1012 22 0 7 chrUextra 17242104 17242242 -11762414 + NTS_DM Other Other 65 201 -39 9 716 907 9 0 27 chrUextra 17242294 17242406 -11762250 + NTS_DM Other Other 25 133 -107 9 716 1304 18 0 6 chrUextra 17242406 17242571 -11762085 + NTS_DM Other Other 38 201 -39 9 716 889 18 0 27 chrUextra 17242623 17242735 -11761921 + NTS_DM Other Other 25 133 -107 9 716 614 0 0 0 chrUextra 17242735 17242803 -11761853 + NTS_DM Other Other 38 105 -135 9 716 1862 36 8 27 chrUextra 17242903 17243160 -11761496 + BATUMI_I LTR Pao 7033 7284 -679 9 716 2578 81 88 29 chrUextra 17243160 17243603 -11761053 + BATUMI_I LTR Pao 1 469 -7494 9 716 3212 179 7 7 chrUextra 17243703 17244391 -11760265 + SAR_DM Satellite Satellite 389 1076 -396 9 716 2333 197 75 25 chrUextra 17244503 17245181 -11759475 - SAR_DM Satellite Satellite -704 768 57 9 716 5927 14 39 0 chrUextra 17246103 17246803 -11757853 + Invader4_I LTR Gypsy 1078 1804 -609 9 716 6364 4 0 0 chrUextra 17246903 17247603 -11757053 - DM1731_I LTR Copia -1969 2007 1308 9 716 6039 7 40 0 chrUextra 17247703 17248403 -11756253 + Invader4_I LTR Gypsy 1122 1849 -564 9 716 576 81 0 0 chrUextra 17248503 17248590 -11756066 + (TAA)n Simple_repeat Simple_repeat 2 88 0 9 716 186 0 98 39 chrUextra 17248619 17248670 -11755986 + (TATAA)n Simple_repeat Simple_repeat 2 55 0 9 716 24 67 0 0 chrUextra 17248675 17248720 -11755936 + AT_rich Low_complexity Low_complexity 1 45 0 9 716 1239 88 0 9 chrUextra 17248774 17249203 -11755453 + (TAA)n Simple_repeat Simple_repeat 1 425 0 9 716 1962 30 0 8 chrUextra 17249305 17249541 -11755115 - CIRCE LINE Composite -695 5661 5428 9 716 2914 20 3 45 chrUextra 17249628 17250003 -11754653 - CIRCE LINE Composite -929 5427 5069 9 716 2435 56 65 0 chrUextra 17250106 17250427 -11754229 + TART LINE telomeric 1518 1859 -12618 9 716 2992 55 18 0 chrUextra 17250418 17250803 -11753853 + TART LINE telomeric 2045 2436 -12041 9 716 6055 23 4 0 chrUextra 17250903 17251603 -11753053 - R1_DM LINE R1 -1561 3795 3093 9 716 2238 83 12 0 chrUextra 17251703 17252042 -11752614 + MDG1_I LTR Gypsy 796 1138 -5458 9 716 1964 73 3 0 chrUextra 17252114 17252402 -11752254 + MDG1_I LTR Gypsy 1134 1422 -5174 9 716 3027 182 7 22 chrUextra 17252503 17253194 -11751462 + SAR_DM Satellite Satellite 438 1118 -354 9 716 297 188 0 0 chrUextra 17253139 17253203 -11751453 - XDMR Unknown Unknown 0 361 298 9 716 591 0 0 0 chrUextra 17253303 17253367 -11751289 - NTS_DM Other Other -176 64 1 9 716 1896 4 17 17 chrUextra 17253367 17253607 -11751049 - NTS_DM Other Other 0 240 1 9 716 1922 4 17 13 chrUextra 17253607 17253846 -11750810 - NTS_DM Other Other 0 240 1 9 716 1033 20 25 25 chrUextra 17253846 17254003 -11750653 - NTS_DM Other Other 0 240 84 9 716 6260 0 3 4 chrUextra 17254103 17254803 -11749853 - SSU-rRNA_Dme rRNA rRNA -181 1814 1116 9 716 6082 9 1 0 chrUextra 17254903 17255603 -11749053 - ROO_I LTR Pao -5989 2267 1567 9 716 6289 7 0 1 chrUextra 17255703 17256403 -11748253 - MICROPIA_I LTR Gypsy -3362 1114 416 9 716 843 102 0 14 chrUextra 17256559 17256840 -11747816 - RSP Satellite Satellite 0 277 1 9 716 856 85 0 14 chrUextra 17256880 17257160 -11747496 - RSP Satellite Satellite -1 276 1 9 716 6149 0 1 0 chrUextra 17257303 17258003 -11746653 + ROO_I LTR Pao 3081 3781 -4475 9 716 817 10 0 30 chrUextra 17258103 17258204 -11746452 - NTS_DM Other Other -118 122 25 9 716 1304 18 0 6 chrUextra 17258256 17258421 -11746235 - NTS_DM Other Other -39 201 38 9 716 881 18 0 27 chrUextra 17258421 17258533 -11746123 - NTS_DM Other Other -107 133 25 9 716 1304 18 0 6 chrUextra 17258585 17258750 -11745906 - NTS_DM Other Other -39 201 38 9 716 419 0 0 0 chrUextra 17258750 17258803 -11745853 - NTS_DM Other Other -107 133 81 9 716 5410 23 43 17 chrUextra 17258903 17259603 -11745053 + ROO_I LTR Pao 3225 3942 -4314 9 716 4679 0 4 2 chrUextra 17259703 17260222 -11744434 + LSU-rRNA_Dme rRNA rRNA 3381 3900 0 9 716 22 56 0 0 chrUextra 17260294 17260330 -11744326 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 262 150 0 0 chrUextra 17260335 17260375 -11744281 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 5861 16 0 0 chrUextra 17260503 17261203 -11743453 - PROTOP_A DNA P -150 955 256 9 716 3144 167 10 13 chrUextra 17261306 17262003 -11742653 - SAR_DM Satellite Satellite -711 694 1 9 716 3336 172 9 10 chrUextra 17262105 17262803 -11741853 + SAR_DM Satellite Satellite 332 1028 -444 9 716 6256 6 0 1 chrUextra 17262903 17263603 -11741053 + R1_DM LINE R1 4584 5282 -74 9 716 6219 6 11 0 chrUextra 17263703 17264403 -11740253 - R1_DM LINE R1 -2988 2368 1661 9 716 313 26 0 0 chrUextra 17264503 17264542 -11740114 + NTS_DM Other Other 163 201 -39 9 716 21 57 0 0 chrUextra 17264542 17264577 -11740079 + AT_rich Low_complexity Low_complexity 1 35 0 9 716 834 9 9 44 chrUextra 17264603 17264716 -11739940 + NTS_DM Other Other 25 133 -107 9 716 821 0 0 10 chrUextra 17264716 17264813 -11739843 + NTS_DM Other Other 38 133 -107 9 716 1451 25 20 20 chrUextra 17264813 17265016 -11739640 + NTS_DM Other Other 38 240 0 9 716 1521 21 0 5 chrUextra 17265016 17265203 -11739453 + NTS_DM Other Other 1 186 -54 9 716 6234 6 10 0 chrUextra 17265303 17266003 -11738653 - DOC2_DM LINE Jockey -1852 2941 2235 9 716 845 10 0 29 chrUextra 17266103 17266207 -11738449 - NTS_DM Other Other -115 125 25 9 716 22 56 0 0 chrUextra 17266233 17266269 -11738387 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 239 125 0 24 chrUextra 17266282 17266323 -11738333 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 262 150 0 0 chrUextra 17266366 17266406 -11738250 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 262 150 0 0 chrUextra 17266458 17266498 -11738158 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 262 150 0 0 chrUextra 17266550 17266590 -11738066 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 22 56 0 0 chrUextra 17266595 17266631 -11738025 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 918 0 0 0 chrUextra 17266703 17266803 -11737853 - LSU-rRNA_Dme rRNA rRNA 0 3900 3801 9 716 3080 179 9 22 chrUextra 17266922 17267603 -11737053 - SAR_DM Satellite Satellite -371 1101 430 9 716 356 265 114 96 chrUextra 17267975 17268255 -11736401 - Invader1_LTR LTR Gypsy -55 368 84 9 716 5823 20 64 0 chrUextra 17268503 17269203 -11735453 + R1_DM LINE R1 2885 3629 -1727 9 716 22 56 0 0 chrUextra 17269646 17269682 -11734974 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 534 273 88 8 chrUextra 17269682 17269993 -11734663 + IDEFIX_I LTR Gypsy 2541 3061 -2902 9 716 6279 4 1 3 chrUextra 17270103 17270803 -11733853 - SSU-rRNA_Dme rRNA rRNA -267 1728 1030 9 716 6243 0 6 1 chrUextra 17270903 17271603 -11733053 + ROO_I LTR Pao 5090 5792 -2464 9 716 2343 132 21 10 chrUextra 17271703 17272400 -11732256 - DMSAT6 Satellite Satellite -22 705 1 9 716 2180 107 53 3 chrUextra 17272504 17272843 -11731813 + Invader1_LTR LTR Gypsy 68 423 0 9 716 697 163 158 124 chrUextra 17272879 17273201 -11731455 - HMSBEAGLE_I LTR Gypsy -5891 638 306 9 716 2980 179 20 14 chrUextra 17273311 17273999 -11730657 - SAR_DM Satellite Satellite -569 903 212 9 716 6401 3 0 0 chrUextra 17274103 17274803 -11729853 - SSU-rRNA_Dme rRNA rRNA -1149 846 147 9 716 5942 31 0 0 chrUextra 17274903 17275603 -11729053 + MDG1_I LTR Gypsy 3571 4270 -2326 9 716 514 119 36 0 chrUextra 17275964 17276048 -11728608 - NTS_DM Other Other -150 90 4 9 716 1318 6 6 18 chrUextra 17276158 17276322 -11728334 - NTS_DM Other Other -78 162 1 9 716 555 0 49 37 chrUextra 17276322 17276403 -11728253 - NTS_DM Other Other 0 240 159 9 716 6031 6 0 0 chrUextra 17276503 17277203 -11727453 + Invader2_I LTR Gypsy 3061 3760 -832 9 716 1679 0 5 0 chrUextra 17277304 17277490 -11727166 + R1_DM LINE R1 5170 5356 0 9 716 4671 4 0 0 chrUextra 17277488 17278003 -11726653 + LSU-rRNA_Dme rRNA rRNA 2640 3154 -746 9 716 6016 7 1 0 chrUextra 17278103 17278803 -11725853 - DM1731_I LTR Copia -2092 1884 1184 9 716 5837 20 1 0 chrUextra 17278903 17279603 -11725053 + MDG1_I LTR Gypsy 3819 4519 -2077 9 716 5969 1 0 0 chrUextra 17279703 17280403 -11724253 - DM176_I LTR Gypsy -769 5651 4952 9 716 3282 166 7 9 chrUextra 17280503 17281200 -11723456 + SAR_DM Satellite Satellite 352 1047 -425 9 716 21 89 0 0 chrUextra 17281421 17281477 -11723179 + AT_rich Low_complexity Low_complexity 1 56 0 9 716 4432 2 2 0 chrUextra 17281496 17282003 -11722653 - SSU-rRNA_Dme rRNA rRNA 0 1995 1488 9 716 5378 44 0 0 chrUextra 17282903 17283602 -11721054 + IDEFIX_I LTR Gypsy 825 1523 -4105 9 716 807 21 0 0 chrUextra 17283703 17283800 -11720856 + (CTTAT)n Simple_repeat Simple_repeat 3 99 0 9 716 5947 9 0 0 chrUextra 17284503 17285203 -11719453 + FW_DM LINE Jockey 1272 1971 -2721 9 716 406 0 37 0 chrUextra 17285321 17285375 -11719281 + (TA)n Simple_repeat Simple_repeat 2 57 0 9 716 4668 2 0 0 chrUextra 17285472 17286003 -11718653 + SSU-rRNA_Dme rRNA rRNA 1 531 -1464 9 716 5900 4 0 6 chrUextra 17286103 17286803 -11717853 + Gypsy4_I LTR Gypsy 1390 2085 -4203 9 716 2009 181 50 30 chrUextra 17286903 17287428 -11717228 - Stalker2_I LTR Gypsy -6577 825 291 9 716 1244 20 0 0 chrUextra 17287455 17287603 -11717053 - STALKER4_LTR LTR Gypsy -53 349 202 9 716 3095 172 13 10 chrUextra 17287703 17288403 -11716253 - SAR_DM Satellite Satellite -467 1005 304 9 716 6054 3 0 0 chrUextra 17288503 17289203 -11715453 + R1_DM LINE R1 2120 2819 -2537 9 716 1091 0 0 0 chrUextra 17289303 17289431 -11715225 + R1_DM LINE R1 4928 5055 -301 9 716 762 43 0 0 chrUextra 17289430 17289524 -11715132 + R1_DM LINE R1 5263 5356 0 9 716 3215 65 9 5 chrUextra 17289557 17290003 -11714653 + R1_DM LINE R1 1 448 -4908 9 716 3024 177 8 5 chrUextra 17290103 17290762 -11713894 + SAR_DM Satellite Satellite 231 891 -581 9 716 6034 3 0 0 chrUextra 17290903 17291603 -11713053 + Invader3_I LTR Gypsy 3225 3924 -964 9 716 2558 202 36 6 chrUextra 17292503 17293201 -11711455 - SAR_DM Satellite Satellite -526 946 228 9 716 2990 6 6 0 chrUextra 17293303 17293667 -11710989 + Invader4_I LTR Gypsy 2048 2413 0 9 716 2898 3 0 3 chrUextra 17293667 17294003 -11710653 + Invader4_LTR LTR Gypsy 1 335 -11 9 716 5965 0 4 3 chrUextra 17294104 17294803 -11709853 + SSU-rRNA_Dme rRNA rRNA 697 1396 -599 9 716 687 191 0 0 chrUextra 17295703 17295850 -11708806 + SAR_DM Satellite Satellite 604 750 -722 9 716 3362 15 152 9 chrUextra 17295857 17296403 -11708253 - DOC2_DM LINE Jockey 0 4793 4170 9 716 4972 96 0 0 chrUextra 17296503 17297203 -11707453 + Gypsy12_I LTR Gypsy 3240 3939 -1607 9 716 1620 25 0 0 chrUextra 17297303 17297712 -11706944 + (CAAGA)n Simple_repeat Simple_repeat 1 409 0 9 716 375 113 0 0 chrUextra 17297718 17297780 -11706876 + (ACATG)n Simple_repeat Simple_repeat 5 66 0 9 716 1593 0 0 0 chrUextra 17297780 17297957 -11706699 + (CAAGA)n Simple_repeat Simple_repeat 1 177 0 9 716 312 91 0 0 chrUextra 17297959 17298003 -11706653 + (ACATG)n Simple_repeat Simple_repeat 2 45 0 9 716 201 121 0 0 chrUextra 17298401 17298434 -11706222 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 716 987 8 0 8 chrUextra 17298903 17299024 -11705632 - Gypsy4_LTR LTR Gypsy -167 120 1 9 716 3526 37 0 11 chrUextra 17299029 17299497 -11705159 - IDEFIX_LTR LTR Gypsy 0 594 132 9 716 682 75 75 0 chrUextra 17299496 17299603 -11705053 - IDEFIX_I LTR Gypsy -558 5070 4956 9 716 928 8 0 24 chrUextra 17300503 17300627 -11704029 + NTS_DM Other Other 42 162 -78 9 716 488 119 36 0 chrUextra 17300737 17300821 -11703835 + NTS_DM Other Other 4 90 -150 9 716 28 48 0 0 chrUextra 17301094 17301136 -11703520 + AT_rich Low_complexity Low_complexity 1 42 0 9 89 5917 10 1 0 chrUextra 17301303 17302003 -11702653 + FW_DM LINE Jockey 3647 4347 -345 9 717 438 52 0 0 chrUextra 17302103 17302161 -11702495 + ARS406_DM Unknown Unknown 132 189 -164 9 717 3162 283 43 26 chrUextra 17302111 17303602 -11701054 - SAR_DM Satellite Satellite -255 1516 1 9 717 693 110 0 8 chrUextra 17303703 17303822 -11700834 - ARS406_DM Unknown Unknown -235 118 1 9 717 2806 189 5 14 chrUextra 17303728 17304397 -11700259 + SAR_DM Satellite Satellite 195 857 -615 9 717 295 62 42 0 chrUextra 17304355 17304403 -11700253 - ARS406_DM Unknown Unknown -164 189 140 9 717 3286 0 0 5 chrUextra 17304503 17304886 -11699770 + LSU-rRNA_Dme rRNA rRNA 3520 3900 0 9 717 22 56 0 0 chrUextra 17304958 17304994 -11699662 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 246 150 0 0 chrUextra 17304999 17305039 -11699617 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 246 150 0 0 chrUextra 17305091 17305131 -11699525 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 2685 186 15 19 chrUextra 17306105 17306803 -11697853 + SAR_DM Satellite Satellite 1 695 -300 9 717 5575 36 9 0 chrUextra 17306903 17307603 -11697053 - R1_DM LINE R1 -1870 3486 2781 9 717 5978 6 0 1 chrUextra 17307703 17308403 -11696253 + DMRT1A LINE R1 3871 4569 -614 9 717 509 200 0 0 chrUextra 17308503 17308613 -11696043 + SAR_DM Satellite Satellite 614 723 -749 9 717 2464 175 9 11 chrUextra 17308644 17309199 -11695457 + SAR_DM Satellite Satellite 326 879 -593 9 717 3212 169 9 7 chrUextra 17309303 17309996 -11694660 + SAR_DM Satellite Satellite 383 1076 -396 9 717 4883 97 0 0 chrUextra 17310903 17311603 -11693053 + R1_DM LINE R1 1208 1907 -3449 9 717 2889 178 13 9 chrUextra 17311706 17312381 -11692275 - SAR_DM Satellite Satellite -549 923 246 9 717 365 113 0 0 chrUextra 17312341 17312403 -11692253 + ARS406_DM Unknown Unknown 1 62 -291 9 717 3085 178 9 6 chrUextra 17313314 17314003 -11690653 - SAR_DM Satellite Satellite -535 937 247 9 717 24 32 0 0 chrUextra 17314509 17314540 -11690116 + AT_rich Low_complexity Low_complexity 1 31 0 9 717 781 114 0 0 chrUextra 17314903 17315034 -11689622 - ARS406_DM Unknown Unknown -222 131 1 9 717 2957 183 7 6 chrUextra 17314928 17315600 -11689056 + SAR_DM Satellite Satellite 180 852 -620 9 717 277 279 58 0 chrUextra 17315924 17316028 -11688628 + NINJA_I LTR Pao 4451 4560 -1451 9 717 5929 1 1 0 chrUextra 17316503 17317203 -11687453 + DOC LINE Jockey 1557 2257 -2468 9 717 2704 189 6 19 chrUextra 17317303 17317973 -11686683 + SAR_DM Satellite Satellite 459 1119 -353 9 717 441 204 0 17 chrUextra 17317887 17318002 -11686654 - XDMR_DM Unknown Unknown 0 360 248 9 717 2218 170 7 17 chrUextra 17318103 17318803 -11685853 - SAR_DM Satellite Satellite -471 692 1 9 717 2315 93 19 30 chrUextra 17318915 17319603 -11685053 - DMSAT6 Satellite Satellite -120 680 1 9 717 798 74 0 8 chrUextra 17319703 17319825 -11684831 - ARS406_DM Unknown Unknown -232 121 1 9 717 2980 164 12 15 chrUextra 17319735 17320402 -11684254 + SAR_DM Satellite Satellite 198 862 -610 9 717 5934 1 1 0 chrUextra 17320503 17321203 -11683453 - ROO_I LTR Pao -3752 4504 3804 9 717 5046 49 3 16 chrUextra 17321303 17322003 -11682653 + BATUMI_I LTR Pao 3099 3789 -4174 9 717 1242 0 0 0 chrUextra 17322103 17322246 -11682410 - IDEFIX_I LTR Gypsy -5485 143 1 9 717 25 0 0 0 chrUextra 17322666 17322691 -11681965 + AT_rich Low_complexity Low_complexity 1 25 0 9 717 1009 95 20 45 chrUextra 17322935 17323134 -11681522 + TART LINE telomeric 10470 10663 -3814 9 717 421 60 88 15 chrUextra 17323132 17323200 -11681456 + TAHRE LINE telomeric 10380 10452 -11 9 717 1415 146 13 152 chrUextra 17323200 17323596 -11681060 + TART LINE telomeric 6985 7325 -7152 9 717 6007 1 0 0 chrUextra 17323721 17324403 -11680253 + HOBO DNA hAT 1 682 -2334 9 717 2972 249 28 17 chrUextra 17324503 17326003 -11678653 - SAR_DM Satellite Satellite -217 1515 1 9 717 423 101 0 0 chrUextra 17326103 17326172 -11678484 - ARS406_DM Unknown Unknown -284 69 1 9 717 2163 193 8 6 chrUextra 17326110 17326636 -11678020 + SAR_DM Satellite Satellite 224 750 -722 9 717 1225 19 0 0 chrUextra 17326644 17326803 -11677853 - DOC2_DM LINE Jockey 0 4793 4635 9 717 21 89 0 0 chrUextra 17326985 17327041 -11677615 + AT_rich Low_complexity Low_complexity 1 56 0 9 717 4755 0 2 0 chrUextra 17327060 17327603 -11677053 - SSU-rRNA_Dme rRNA rRNA 0 1995 1452 9 717 5914 11 0 0 chrUextra 17327703 17328403 -11676253 - ROO_I LTR Pao -2436 5820 5121 9 717 1584 169 50 7 chrUextra 17328503 17329203 -11675453 + SAR_DM Satellite Satellite 1 729 -754 9 717 5691 20 1 1 chrUextra 17329303 17330003 -11674653 + R1_DM LINE R1 3282 3981 -1375 9 717 2987 179 7 9 chrUextra 17330103 17330783 -11673873 - SAR_DM Satellite Satellite -599 873 195 9 717 673 106 0 9 chrUextra 17330689 17330803 -11673853 + ARS406_DM Unknown Unknown 1 113 -240 9 717 4808 22 3 3 chrUextra 17330905 17331498 -11673158 + R1_DM LINE R1 4764 5356 0 9 717 519 44 0 0 chrUextra 17331531 17331599 -11673057 + R1_DM LINE R1 1 68 -5288 9 717 2699 195 31 11 chrUextra 17331703 17332403 -11672253 + SAR_DM Satellite Satellite 1 714 -396 9 717 6004 11 0 0 chrUextra 17332503 17333203 -11671453 + Copia2_I LTR Copia 2993 3692 -470 9 717 2896 179 11 19 chrUextra 17333307 17334003 -11670653 - SAR_DM Satellite Satellite -361 1111 421 9 717 244 0 0 0 chrUextra 17334103 17334132 -11670524 + STALKER4_I LTR Gypsy 6502 6530 0 9 717 3449 2 0 2 chrUextra 17334132 17334535 -11670121 + STALKER4_LTR LTR Gypsy 1 402 0 9 717 1738 58 91 0 chrUextra 17334562 17334803 -11669853 - R1_DM LINE R1 -3787 1569 1307 9 717 5390 31 7 0 chrUextra 17334903 17335602 -11669054 - Invader2_I LTR Gypsy -2211 2381 1678 9 717 5836 13 1 1 chrUextra 17335702 17336401 -11668255 - STALKER4_I LTR Gypsy -1670 4860 4162 9 717 1732 0 14 0 chrUextra 17336507 17336719 -11667937 - NTS_DM Other Other -25 215 1 9 717 1861 0 17 13 chrUextra 17336719 17336958 -11667698 - NTS_DM Other Other 0 240 1 9 717 1813 4 21 13 chrUextra 17336958 17337196 -11667460 - NTS_DM Other Other 0 240 1 9 717 5103 29 44 0 chrUextra 17337300 17337999 -11666657 - R2_DM LINE R2 -1656 1951 1222 9 717 4787 10 3 11 chrUextra 17338190 17338798 -11665858 + STALKER4_I LTR Gypsy 1064 1666 -4864 9 717 5993 3 0 1 chrUextra 17338898 17339597 -11665059 - DOC LINE Jockey -955 3770 3073 9 717 6075 1 0 0 chrUextra 17339697 17340396 -11664260 - DOC LINE Jockey -897 3828 3130 9 717 1737 47 172 0 chrUextra 17340894 17341149 -11663507 + PROTOP DNA P 1 299 -4181 9 717 383 17 52 0 chrUextra 17341136 17341194 -11663462 + PROTOP DNA P 522 582 -3898 9 717 2320 93 13 43 chrUextra 17341297 17341994 -11662662 - DMSAT6 Satellite Satellite -28 675 1 9 717 4369 8 21 4 chrUextra 17342266 17342791 -11661865 + Copia2_I LTR Copia 3526 4059 -103 9 717 5903 7 1 3 chrUextra 17342893 17343592 -11661064 + R2_DM LINE R2 2522 3219 -388 9 717 2978 201 13 20 chrUextra 17343697 17344391 -11660265 - SAR_DM Satellite Satellite -569 689 1 9 717 3012 168 16 14 chrUextra 17344491 17345190 -11659466 - SAR_DM Satellite Satellite -572 900 201 9 717 5874 4 0 0 chrUextra 17345290 17345988 -11658668 - ROO_I LTR Pao -4414 3842 3145 9 717 5716 10 1 0 chrUextra 17346089 17346788 -11657868 - R1_DM LINE R1 -4224 1132 433 9 717 2796 6 3 0 chrUextra 17346888 17347224 -11657432 - TAHRE LINE telomeric -2982 7481 7145 9 717 2932 14 30 0 chrUextra 17347222 17347587 -11657069 - TAHRE LINE telomeric -8 10455 10080 9 717 5967 1 0 0 chrUextra 17347687 17348386 -11656270 + ROO_I LTR Pao 3616 4314 -3942 9 717 5964 1 1 1 chrUextra 17348486 17349185 -11655471 + R1_DM LINE R1 1511 2209 -3147 9 717 2915 182 6 15 chrUextra 17350085 17350769 -11653887 + SAR_DM Satellite Satellite 399 1076 -396 9 717 2349 184 6 4 chrUextra 17350892 17351420 -11653236 + SAR_DM Satellite Satellite 237 765 -707 9 717 1363 12 0 0 chrUextra 17351419 17351582 -11653074 + DM1731_LTR LTR Copia 1 163 -173 9 717 5847 19 0 0 chrUextra 17351682 17352381 -11652275 + R1_DM LINE R1 3975 4673 -683 9 717 775 10 0 30 chrUextra 17352481 17352581 -11652075 - NTS_DM Other Other -119 121 25 9 717 22 56 0 0 chrUextra 17352607 17352643 -11652013 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 225 125 0 24 chrUextra 17352656 17352697 -11651959 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17352740 17352780 -11651876 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17352832 17352872 -11651784 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17352924 17352964 -11651692 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 22 56 0 0 chrUextra 17352969 17353005 -11651651 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 906 0 0 0 chrUextra 17353077 17353180 -11651476 - LSU-rRNA_Dme rRNA rRNA 0 3900 3798 9 717 657 236 156 46 chrUextra 17353575 17353903 -11650753 - GTWIN_LTR LTR Gypsy -90 405 42 9 717 255 159 0 100 chrUextra 17353906 17353976 -11650680 - Gypsy_DS LTR Gypsy -582 6940 6878 9 717 3958 24 56 0 chrUextra 17354079 17354614 -11650042 + ROO_I LTR Pao 4722 5286 -2970 9 717 1386 55 0 0 chrUextra 17354596 17354778 -11649878 + ROO_I LTR Pao 5432 5613 -2643 9 717 1279 13 0 0 chrUextra 17354878 17355028 -11649628 + G_DM LINE Jockey 1067 1216 -3130 9 717 4625 9 4 0 chrUextra 17355027 17355577 -11649079 + G_DM LINE Jockey 1342 1893 -2453 9 717 5599 36 16 0 chrUextra 17355677 17356376 -11648280 - R1_DM LINE R1 -3326 2030 1321 9 717 5878 3 0 0 chrUextra 17356476 17357175 -11647481 + LSU-rRNA_Dme rRNA rRNA 246 944 -2956 9 717 5530 17 3 0 chrUextra 17357275 17357974 -11646682 - Invader2_I LTR Gypsy -2381 2211 1511 9 717 3247 163 19 7 chrUextra 17358075 17358773 -11645883 + SAR_DM Satellite Satellite 332 1037 -435 9 717 246 150 0 0 chrUextra 17359019 17359059 -11645597 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17359111 17359151 -11645505 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 22 56 0 0 chrUextra 17359156 17359192 -11645464 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 2664 3 0 0 chrUextra 17359264 17359572 -11645084 - LSU-rRNA_Dme rRNA rRNA 0 3900 3593 9 717 3122 130 26 41 chrUextra 17359675 17360339 -11644317 + TART LINE telomeric 9523 10176 -4301 9 717 832 9 9 27 chrUextra 17361312 17361423 -11643233 + NTS_DM Other Other 25 133 -107 9 717 787 0 0 10 chrUextra 17361423 17361520 -11643136 + NTS_DM Other Other 38 133 -107 9 717 1408 20 20 20 chrUextra 17361520 17361723 -11642933 + NTS_DM Other Other 38 240 0 9 717 1713 25 17 17 chrUextra 17361723 17361963 -11642693 + NTS_DM Other Other 1 240 0 9 717 35 24 0 0 chrUextra 17362309 17362351 -11642305 + AT_rich Low_complexity Low_complexity 1 42 0 9 717 352 0 42 0 chrUextra 17362570 17362618 -11642038 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 717 462 0 0 0 chrUextra 17362715 17362768 -11641888 + SSU-rRNA_Dme rRNA rRNA 1 53 -1942 9 717 21 0 0 0 chrUextra 17362953 17362974 -11641682 + AT_rich Low_complexity Low_complexity 1 21 0 9 717 2596 28 3 0 chrUextra 17363667 17363984 -11640672 + Gypsy_LTR LTR Gypsy 165 482 0 9 717 3191 62 43 87 chrUextra 17364466 17365119 -11639537 - BATUMI_I LTR Pao -6772 1191 568 9 717 4070 10 0 2 chrUextra 17365265 17365747 -11638909 + R1_DM LINE R1 4876 5356 0 9 717 1913 5 0 0 chrUextra 17365745 17365964 -11638692 + LSU-rRNA_Dme rRNA rRNA 2640 2858 -1042 9 717 6060 4 0 0 chrUextra 17366064 17366763 -11637893 + LSU-rRNA_Dme rRNA rRNA 1892 2590 -1310 9 717 3263 5 0 0 chrUextra 17366863 17367242 -11637414 + R1_DM LINE R1 4978 5356 0 9 717 2751 9 0 0 chrUextra 17367240 17367562 -11637094 + LSU-rRNA_Dme rRNA rRNA 2640 2961 -939 9 717 5589 29 0 0 chrUextra 17367664 17368361 -11636295 - MDG1_I LTR Gypsy -1622 4974 4278 9 717 262 106 0 21 chrUextra 17368886 17368934 -11635722 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 717 351 49 65 16 chrUextra 17368956 17369018 -11635638 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 717 684 190 0 7 chrUextra 17369017 17369160 -11635496 - DMLTR5 LTR Gypsy 0 266 125 9 717 1451 0 25 15 chrUextra 17369260 17369457 -11635199 + NTS_DM Other Other 42 240 0 9 717 1861 0 17 13 chrUextra 17369457 17369696 -11634960 + NTS_DM Other Other 1 240 0 9 717 1839 4 17 13 chrUextra 17369696 17369935 -11634721 + NTS_DM Other Other 1 240 0 9 717 2772 197 15 11 chrUextra 17370059 17370757 -11633899 + SAR_DM Satellite Satellite 1 701 -397 9 717 5879 0 0 1 chrUextra 17370859 17371557 -11633099 - ROO_I LTR Pao -4560 3696 3000 9 717 2506 94 10 16 chrUextra 17371657 17372351 -11632305 + DMSAT6 Satellite Satellite 1 690 -85 9 717 436 0 0 0 chrUextra 17372465 17372515 -11632141 - CIRCE LINE Composite -1376 4980 4931 9 717 3422 30 42 0 chrUextra 17372515 17372948 -11631708 + R1_DM LINE R1 2277 2727 -2629 9 717 1777 10 0 0 chrUextra 17372946 17373155 -11631501 + R1_DM LINE R1 3520 3728 -1628 9 717 4319 0 0 6 chrUextra 17373255 17373769 -11630887 + DOC LINE Jockey 4211 4721 -4 9 717 411 202 0 0 chrUextra 17373769 17373893 -11630763 + (CTATT)n Simple_repeat Simple_repeat 4 127 0 9 717 5543 41 1 0 chrUextra 17374054 17374744 -11629912 - BATUMI_I LTR Pao -3681 4282 3592 9 717 3016 182 10 7 chrUextra 17374853 17375552 -11629104 - SAR_DM Satellite Satellite -519 953 253 9 717 5792 6 0 0 chrUextra 17375652 17376351 -11628305 - Invader2_I LTR Gypsy -1709 2883 2185 9 717 5665 7 3 0 chrUextra 17376451 17377150 -11627506 - Invader2_I LTR Gypsy -2416 2176 1476 9 717 2968 0 6 3 chrUextra 17377250 17377597 -11627059 + SSU-rRNA_Dme rRNA rRNA 1648 1995 0 9 717 21 89 0 0 chrUextra 17377616 17377672 -11626984 + AT_rich Low_complexity Low_complexity 1 56 0 9 717 2649 186 33 7 chrUextra 17378848 17379547 -11625109 + SAR_DM Satellite Satellite 1 716 -396 9 717 4265 46 20 36 chrUextra 17380446 17381145 -11623511 + BATUMI_I LTR Pao 194 881 -7082 9 717 982 51 7 0 chrUextra 17381245 17381383 -11623273 + ARS406_DM Unknown Unknown 51 189 -164 9 717 3056 168 12 13 chrUextra 17381261 17381944 -11622712 - SAR_DM Satellite Satellite -535 937 256 9 717 4610 13 0 4 chrUextra 17382044 17382743 -11621913 - Invader2_I LTR Gypsy -1041 3551 2769 9 717 2860 55 0 12 chrUextra 17382843 17383268 -11621388 + IDEFIX_I LTR Gypsy 5129 5548 -80 9 717 2088 37 0 4 chrUextra 17383270 17383542 -11621114 + IDEFIX_LTR LTR Gypsy 173 443 -151 9 717 1754 272 42 31 chrUextra 17383642 17384341 -11620315 - MAX_I LTR Pao -734 7180 6475 9 717 2898 63 5 17 chrUextra 17384700 17385106 -11619550 + Baggins1 LINE LOA 4791 5191 -262 9 717 3251 171 6 6 chrUextra 17385240 17385939 -11618717 + SAR_DM Satellite Satellite 376 1074 -398 9 717 1794 213 12 48 chrUextra 17386039 17386523 -11618133 + Gypsy12_LTR LTR Gypsy 93 559 -1777 9 717 286 282 8 61 chrUextra 17386583 17386715 -11617941 + Gypsy12_LTR LTR Gypsy 679 803 -1533 9 717 2879 183 11 9 chrUextra 17386844 17387537 -11617119 + SAR_DM Satellite Satellite 332 1026 -446 9 717 1710 46 5 0 chrUextra 17387637 17387855 -11616801 + PROTOP DNA P 4262 4480 0 9 717 26 30 0 0 chrUextra 17388214 17388247 -11616409 + AT_rich Low_complexity Low_complexity 1 33 0 9 717 22 70 0 0 chrUextra 17388293 17388336 -11616320 + AT_rich Low_complexity Low_complexity 1 43 0 9 717 5938 0 3 6 chrUextra 17389235 17389934 -11614722 - SSU-rRNA_Dme rRNA rRNA -183 1812 1116 9 717 1258 6 64 55 chrUextra 17390034 17390362 -11614294 + (TCTTG)n Simple_repeat Simple_repeat 1 331 0 9 717 205 0 171 0 chrUextra 17390362 17390397 -11614259 + (CATGT)n Simple_repeat Simple_repeat 4 44 0 9 717 759 40 71 0 chrUextra 17390397 17390523 -11614133 + (TCTTG)n Simple_repeat Simple_repeat 3 137 0 9 717 1164 56 0 17 chrUextra 17390523 17390704 -11613952 + (CATGT)n Simple_repeat Simple_repeat 3 180 0 9 717 243 0 0 0 chrUextra 17390704 17390730 -11613926 + (TCTTG)n Simple_repeat Simple_repeat 4 30 0 9 717 1294 22 16 27 chrUextra 17390833 17391021 -11613635 - NTS_DM Other Other -17 223 38 9 717 817 0 0 0 chrUextra 17391021 17391117 -11613539 - NTS_DM Other Other -107 133 38 9 717 832 9 9 27 chrUextra 17391117 17391228 -11613428 - NTS_DM Other Other -107 133 25 9 717 21 57 0 0 chrUextra 17391254 17391289 -11613367 + AT_rich Low_complexity Low_complexity 1 35 0 9 717 1252 18 0 6 chrUextra 17391289 17391454 -11613202 - NTS_DM Other Other -39 201 38 9 717 585 26 0 0 chrUextra 17391454 17391532 -11613124 - NTS_DM Other Other -107 133 56 9 717 260 264 87 16 chrUextra 17391632 17391759 -11612897 - QUASIMODO_I LTR Gypsy -2987 3073 2938 9 717 22 35 0 0 chrUextra 17391815 17391844 -11612812 + AT_rich Low_complexity Low_complexity 1 29 0 9 717 181 77 0 71 chrUextra 17391876 17391918 -11612738 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 9 717 2906 197 21 18 chrUextra 17392432 17393126 -11611530 - SAR_DM Satellite Satellite -563 696 1 9 717 2339 94 19 19 chrUextra 17393233 17393929 -11610727 + DMSAT6 Satellite Satellite 1 696 -152 9 717 1158 122 0 0 chrUextra 17394029 17394252 -11610404 + (TA)n Simple_repeat Simple_repeat 1 223 0 9 717 2990 14 0 5 chrUextra 17394253 17394622 -11610034 - ROVER-LTR_DM LTR Gypsy 0 367 1 9 717 871 19 0 0 chrUextra 17394622 17394728 -11609928 - ROVER-I_DM LTR Gypsy 0 6584 6479 9 717 2543 190 12 26 chrUextra 17394828 17395527 -11609129 + SAR_DM Satellite Satellite 1 689 -354 9 717 5684 17 1 1 chrUextra 17395627 17396326 -11608330 + FW_DM LINE Jockey 2749 3447 -1245 9 717 223 124 229 0 chrUextra 17397018 17397123 -11607533 + (TTTAG)n Simple_repeat Simple_repeat 5 133 0 9 717 3235 3 0 0 chrUextra 17397225 17397596 -11607060 + LSU-rRNA_Dme rRNA rRNA 3530 3900 0 9 717 22 56 0 0 chrUextra 17397668 17397704 -11606952 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 246 150 0 0 chrUextra 17397709 17397749 -11606907 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 246 150 0 0 chrUextra 17397801 17397841 -11606815 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 2759 176 43 10 chrUextra 17398045 17398721 -11605935 - SAR_DM Satellite Satellite -396 1076 379 9 717 2833 176 33 8 chrUextra 17398829 17399497 -11605159 - SAR_DM Satellite Satellite -593 879 195 9 717 578 109 73 0 chrUextra 17399412 17399522 -11605134 + ARS406_DM Unknown Unknown 1 118 -235 9 717 5930 0 1 4 chrUextra 17399622 17400314 -11604342 - SSU-rRNA_Dme rRNA rRNA -602 1393 704 9 717 1620 0 0 0 chrUextra 17400421 17400702 -11603954 + (AATAG)n Simple_repeat Simple_repeat 1 281 0 9 717 2946 176 12 10 chrUextra 17401232 17401919 -11602737 - SAR_DM Satellite Satellite -396 1076 389 9 717 5865 0 3 3 chrUextra 17402021 17402718 -11601938 - R1_DM LINE R1 -3637 1719 1023 9 717 2788 191 30 11 chrUextra 17402818 17403510 -11601146 - SAR_DM Satellite Satellite -1088 705 1 9 717 262 106 0 21 chrUextra 17403832 17403880 -11600776 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 717 351 49 65 16 chrUextra 17403902 17403964 -11600692 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 717 897 173 102 15 chrUextra 17403963 17404168 -11600488 - DMLTR5 LTR Gypsy 0 266 44 9 717 5540 9 0 0 chrUextra 17404416 17405115 -11599541 + DM297_I LTR Gypsy 5277 5975 -192 9 717 5799 13 1 1 chrUextra 17405215 17405913 -11598743 + R1_DM LINE R1 3539 4236 -1120 9 717 3076 0 0 0 chrUextra 17406014 17406374 -11598282 + HETA LINE telomeric 5717 6076 -5 9 717 1082 213 235 14 chrUextra 17406360 17406713 -11597943 + TART LINE telomeric 3590 4020 -10457 9 717 3042 86 128 13 chrUextra 17406813 17407350 -11597306 - DMCR1A LINE CR1 -1526 2944 2346 9 717 2294 103 22 33 chrUextra 17407617 17408311 -11596345 + DMSAT6 Satellite Satellite 1 685 -233 9 717 4659 56 49 4 chrUextra 17408411 17409110 -11595546 - IDEFIX_I LTR Gypsy -1629 3999 3270 9 717 5216 11 0 1 chrUextra 17409210 17409876 -11594780 + DM176_I LTR Gypsy 5756 6420 0 9 717 247 30 0 0 chrUextra 17409876 17409909 -11594747 + DM176_LTR LTR Gypsy 1 33 -474 9 717 2019 8 0 0 chrUextra 17410011 17410248 -11594408 - QUASIMODO_I LTR Gypsy -5823 237 1 9 717 3921 9 0 2 chrUextra 17410248 17410708 -11593948 - QUASIMODO_LTR LTR Gypsy 0 658 200 9 717 22 56 0 0 chrUextra 17410960 17410996 -11593660 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 310 324 27 27 chrUextra 17411348 17411497 -11593159 + Gypsy2_I LTR Gypsy 1344 1492 -4643 9 717 1037 298 75 9 chrUextra 17411609 17412300 -11592356 - Gypsy4_I LTR Gypsy -2489 3688 2860 9 717 408 212 0 17 chrUextra 17413205 17413320 -11591336 + XDMR_DM Unknown Unknown 248 360 0 9 717 2750 183 9 21 chrUextra 17413234 17413904 -11590752 - SAR_DM Satellite Satellite -354 1118 457 9 717 2821 186 8 8 chrUextra 17414004 17414671 -11589985 - SAR_DM Satellite Satellite -611 861 195 9 717 810 80 0 8 chrUextra 17414577 17414703 -11589953 + ARS406_DM Unknown Unknown 1 125 -228 9 717 3529 16 0 0 chrUextra 17414803 17415227 -11589429 - R1_DM LINE R1 -907 4449 4026 9 717 2127 23 0 4 chrUextra 17415237 17415502 -11589154 - R1_DM LINE R1 -1690 3666 3403 9 717 5815 7 1 0 chrUextra 17415602 17416301 -11588355 + QUASIMODO_I LTR Gypsy 2763 3462 -2598 9 717 5915 1 0 0 chrUextra 17416401 17417100 -11587556 + TABOR_I LTR Gypsy 1037 1735 -4601 9 717 5768 17 0 3 chrUextra 17417200 17417899 -11586757 - G_DM LINE Jockey -1167 3179 2483 9 717 6089 4 0 0 chrUextra 17417999 17418698 -11585958 + Gypsy6_I LTR Gypsy 2438 3136 -3876 9 717 5949 13 3 0 chrUextra 17418798 17419497 -11585159 - Copia2_I LTR Copia -1665 2497 1797 9 717 5705 11 0 0 chrUextra 17419597 17420296 -11584360 - Invader2_I LTR Gypsy -1115 3477 2779 9 717 5875 6 0 1 chrUextra 17420396 17421095 -11583561 + DMRT1B LINE R1 961 1658 -3525 9 717 2911 180 6 19 chrUextra 17421209 17421894 -11582762 - SAR_DM Satellite Satellite -353 1119 444 9 717 1861 0 17 13 chrUextra 17422022 17422261 -11582395 + NTS_DM Other Other 1 240 0 9 717 1861 0 17 13 chrUextra 17422261 17422500 -11582156 + NTS_DM Other Other 1 240 0 9 717 1301 6 0 18 chrUextra 17422500 17422665 -11581991 + NTS_DM Other Other 1 162 -78 9 717 5953 11 0 1 chrUextra 17422793 17423492 -11581164 + Gypsy6_I LTR Gypsy 5861 6558 -454 9 717 375 40 20 0 chrUextra 17424391 17424441 -11580215 + ARS406_DM Unknown Unknown 139 189 -164 9 717 2868 174 11 11 chrUextra 17424398 17425061 -11579595 - SAR_DM Satellite Satellite -615 857 195 9 717 754 107 0 0 chrUextra 17424968 17425090 -11579566 + ARS406_DM Unknown Unknown 1 122 -231 9 717 5383 6 0 0 chrUextra 17425193 17425822 -11578834 + QUASIMODO_LTR LTR Gypsy 30 658 0 9 717 586 0 0 0 chrUextra 17425822 17425889 -11578767 + QUASIMODO_I LTR Gypsy 1 67 -5993 9 717 5718 27 0 0 chrUextra 17426788 17427487 -11577169 - BATUMI_I LTR Pao -2684 5279 4581 9 717 4486 34 5 4 chrUextra 17427723 17428286 -11576370 - Baggins1 LINE LOA 0 5453 4890 9 717 5850 4 1 1 chrUextra 17428386 17429085 -11575571 - R1_DM LINE R1 -3862 1494 796 9 717 2738 181 19 26 chrUextra 17429186 17429884 -11574772 - SAR_DM Satellite Satellite -359 1113 421 9 717 1264 6 6 18 chrUextra 17429989 17430153 -11574503 - NTS_DM Other Other -78 162 1 9 717 1861 0 17 13 chrUextra 17430153 17430392 -11574264 - NTS_DM Other Other 0 240 1 9 717 1817 4 17 17 chrUextra 17430392 17430632 -11574024 - NTS_DM Other Other 0 240 1 9 717 273 0 78 59 chrUextra 17430632 17430683 -11573973 - NTS_DM Other Other 0 240 189 9 717 2885 6 0 3 chrUextra 17430783 17431127 -11573529 - DM176_LTR LTR Gypsy -164 343 1 9 717 1158 122 0 0 chrUextra 17431128 17431478 -11573178 + (TA)n Simple_repeat Simple_repeat 1 350 0 9 717 302 0 0 122 chrUextra 17431582 17431631 -11573025 - NINJA_LTR LTR Pao -274 43 1 9 717 5249 21 3 1 chrUextra 17431631 17432281 -11572375 - NINJA_I LTR Pao 0 6011 5361 9 718 58 15 0 0 chrUextra 17432816 17432881 -11571775 + AT_rich Low_complexity Low_complexity 1 65 0 9 718 5892 0 1 4 chrUextra 17433180 17433879 -11570777 - R1_DM LINE R1 -3562 1794 1098 9 718 2263 58 6 22 chrUextra 17434360 17434678 -11569978 - Baggins1 LINE LOA -262 5191 4879 9 718 58 15 0 0 chrUextra 17435018 17435083 -11569573 + AT_rich Low_complexity Low_complexity 1 65 0 9 718 22 35 0 0 chrUextra 17435258 17435287 -11569369 + AT_rich Low_complexity Low_complexity 1 29 0 9 718 1315 6 6 0 chrUextra 17435321 17435477 -11569179 + Copia2_I LTR Copia 3117 3273 -889 9 718 5845 16 6 0 chrUextra 17436376 17437075 -11567581 - Copia2_I LTR Copia -995 3167 2465 9 718 2196 96 170 0 chrUextra 17437175 17437551 -11567105 + TAHRE LINE telomeric 10012 10451 -12 9 718 1088 173 105 68 chrUextra 17437550 17437873 -11566783 + TAHRE LINE telomeric 7044 7378 -3085 9 718 5748 16 29 0 chrUextra 17437974 17438673 -11565983 - FW_DM LINE Jockey -626 4066 3348 9 718 4633 63 39 3 chrUextra 17438773 17439472 -11565184 - TART LINE telomeric -11478 2999 2276 9 718 541 137 11 0 chrUextra 17439615 17439710 -11564946 + DMCR1A LINE CR1 365 460 -4010 9 718 3558 27 9 50 chrUextra 17439729 17440270 -11564386 + DOC5_DM LINE Jockey 3979 4497 -185 9 718 6105 0 0 1 chrUextra 17440371 17441070 -11563586 - LSU-rRNA_Dme rRNA rRNA -498 3402 2705 9 718 1533 25 0 0 chrUextra 17441170 17441453 -11563203 + (CTTAT)n Simple_repeat Simple_repeat 1 283 0 9 718 1059 91 0 0 chrUextra 17441468 17441643 -11563013 + (CTTAT)n Simple_repeat Simple_repeat 3 177 0 9 718 812 129 0 6 chrUextra 17441698 17441869 -11562787 + (CTTAT)n Simple_repeat Simple_repeat 2 171 0 9 718 3709 0 0 0 chrUextra 17441969 17442395 -11562261 - NOMAD_I LTR Gypsy -6146 426 1 9 718 2352 4 0 0 chrUextra 17442395 17442668 -11561988 - NOMAD_LTR LTR Gypsy 0 518 246 9 718 335 296 19 19 chrUextra 17443040 17443202 -11561454 - MDG3_I LTR Gypsy -1562 3424 3263 9 718 5755 9 1 0 chrUextra 17443567 17444266 -11560390 + Invader2_I LTR Gypsy 3530 4229 -363 9 718 5960 10 0 0 chrUextra 17444366 17445065 -11559591 - FW_DM LINE Jockey -235 4457 3759 9 718 3084 175 6 17 chrUextra 17445964 17446662 -11557994 + SAR_DM Satellite Satellite 418 1107 -365 9 718 488 119 36 0 chrUextra 17446847 17446931 -11557725 + NTS_DM Other Other 4 90 -150 9 718 28 48 0 0 chrUextra 17447204 17447246 -11557410 + AT_rich Low_complexity Low_complexity 1 42 0 9 718 5506 12 0 0 chrUextra 17447562 17448212 -11556444 + DMRT1A LINE R1 2361 3010 -2173 9 718 263 78 20 0 chrUextra 17448210 17448261 -11556395 - TRANSIB4 DNA Transib -52 2558 2507 9 718 1930 96 16 13 chrUextra 17448753 17449060 -11555596 + Invader1_I LTR Gypsy 2718 3025 -161 9 718 3058 176 9 10 chrUextra 17449166 17449859 -11554797 - SAR_DM Satellite Satellite -514 958 267 9 718 5883 13 0 0 chrUextra 17449959 17450658 -11553998 + ROO_I LTR Pao 5220 5918 -2338 9 718 1908 257 20 17 chrUextra 17451557 17452214 -11552442 + FROGGER_I LTR Copia 1333 1991 -86 9 718 6121 1 0 0 chrUextra 17452356 17453055 -11551601 - SSU-rRNA_Dme rRNA rRNA -888 1107 409 9 718 5513 24 49 1 chrUextra 17453155 17453854 -11550802 - R1_DM LINE R1 -1990 3366 2635 9 718 6072 1 0 0 chrUextra 17453954 17454653 -11550003 - FW_DM LINE Jockey -2155 2537 1839 9 718 1332 0 0 0 chrUextra 17454753 17454901 -11549755 + (GAGAA)n Simple_repeat Simple_repeat 2 149 0 9 718 5872 4 1 1 chrUextra 17455552 17456251 -11548405 + R1_DM LINE R1 772 1470 -3886 9 718 502 0 0 0 chrUextra 17456351 17456409 -11548247 - NTS_DM Other Other -145 95 38 9 718 802 9 9 36 chrUextra 17456409 17456521 -11548135 - NTS_DM Other Other -107 133 25 9 718 21 57 0 0 chrUextra 17456547 17456582 -11548074 + AT_rich Low_complexity Low_complexity 1 35 0 9 718 1252 18 0 6 chrUextra 17456582 17456747 -11547909 - NTS_DM Other Other -39 201 38 9 718 870 9 0 27 chrUextra 17456747 17456859 -11547797 - NTS_DM Other Other -107 133 25 9 718 943 22 0 14 chrUextra 17456911 17457050 -11547606 - NTS_DM Other Other -39 201 65 9 718 6081 0 4 0 chrUextra 17457150 17457849 -11546807 + LSU-rRNA_Dme rRNA rRNA 2970 3671 -229 9 718 5961 0 0 0 chrUextra 17458756 17459447 -11545209 - BARI_DM DNA Tc1 -1 1727 1037 9 718 1955 0 0 0 chrUextra 17459547 17459772 -11544884 + BEL_LTR LTR Pao 137 361 0 9 718 866 62 0 0 chrUextra 17459784 17459897 -11544759 - CIRCE LINE Composite -5271 1085 973 9 718 1708 20 0 0 chrUextra 17460039 17460243 -11544413 - CIRCE LINE Composite -5386 970 767 9 718 5477 3 5 5 chrUextra 17460389 17461045 -11543611 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1133 9 718 1623 14 5 0 chrUextra 17461145 17461356 -11543300 + QUASIMODO_I LTR Gypsy 5849 6060 0 9 718 4083 8 0 0 chrUextra 17461356 17461844 -11542812 + QUASIMODO_LTR LTR Gypsy 1 488 -170 9 718 5861 1 0 4 chrUextra 17461945 17462643 -11542013 + ROO_I LTR Pao 1814 2508 -5748 9 718 5734 30 0 0 chrUextra 17462743 17463442 -11541214 + DMRT1B LINE R1 3099 3797 -1386 9 718 2993 173 10 9 chrUextra 17463547 17464229 -11540427 - SAR_DM Satellite Satellite -610 862 180 9 718 697 102 0 8 chrUextra 17464122 17464241 -11540415 + ARS406_DM Unknown Unknown 1 118 -235 9 718 5915 1 1 6 chrUextra 17464341 17465040 -11539616 - LSU-rRNA_Dme rRNA rRNA -2422 1478 783 9 718 3482 64 4 4 chrUextra 17465140 17465613 -11539043 - R1_DM LINE R1 -4883 473 1 9 718 1669 10 0 0 chrUextra 17465646 17465839 -11538817 - R1_DM LINE R1 0 5356 5164 9 718 5540 1 1 36 chrUextra 17465939 17466638 -11538018 - LSU-rRNA_Dme rRNA rRNA -3109 791 117 9 718 2850 177 9 11 chrUextra 17466740 17467404 -11537252 - SAR_DM Satellite Satellite -615 857 195 9 718 772 103 0 0 chrUextra 17467311 17467437 -11537219 + ARS406_DM Unknown Unknown 1 126 -227 9 718 4372 25 60 1 chrUextra 17467537 17468236 -11536420 + R1_DM LINE R1 2065 2804 -2552 9 718 1488 31 1 1 chrUextra 17468336 17469035 -11535621 + (CTTAT)n Simple_repeat Simple_repeat 1 699 0 9 718 3060 181 7 9 chrUextra 17469137 17469830 -11534826 + SAR_DM Satellite Satellite 346 1037 -435 9 718 2932 176 10 10 chrUextra 17469941 17470629 -11534027 + SAR_DM Satellite Satellite 192 879 -593 9 718 2893 181 15 18 chrUextra 17470733 17471432 -11533224 + SAR_DM Satellite Satellite 1 697 -411 9 718 3372 7 5 0 chrUextra 17471532 17471935 -11532721 + IDEFIX_I LTR Gypsy 2283 2687 -2941 9 718 2292 33 0 10 chrUextra 17471929 17472231 -11532425 + IDEFIX_I LTR Gypsy 2814 3112 -2516 9 718 357 243 18 0 chrUextra 17472331 17472442 -11532214 + SAR_DM Satellite Satellite 964 1076 -396 9 718 1746 177 25 9 chrUextra 17472457 17473026 -11531630 + SAR_DM Satellite Satellite 1 578 -749 9 718 8925 76 44 31 chrUextra 17473929 17475195 -11529461 + R1_DM LINE R1 4074 5356 0 9 718 1364 75 10 0 chrUextra 17475228 17475427 -11529229 + R1_DM LINE R1 1 201 -5155 9 718 5966 1 3 4 chrUextra 17475527 17476226 -11528430 + SSU-rRNA_Dme rRNA rRNA 1075 1772 -223 9 718 3162 172 7 7 chrUextra 17476336 17477021 -11527635 + SAR_DM Satellite Satellite 195 879 -593 9 718 5271 22 0 44 chrUextra 17477125 17477824 -11526832 + CIRCE LINE Composite 3904 4571 -1785 9 718 2934 179 9 20 chrUextra 17477931 17478623 -11526033 - SAR_DM Satellite Satellite -353 1119 436 9 718 5791 20 1 0 chrUextra 17478723 17479422 -11525234 + R1_DM LINE R1 1783 2482 -2874 9 718 1145 109 15 5 chrUextra 17480019 17480221 -11524435 + DNAREP1_DM LINE Penelope 1 204 -390 9 718 6070 3 1 0 chrUextra 17480321 17481020 -11523636 + Gypsy6_I LTR Gypsy 1082 1781 -5231 9 718 1229 0 19 6 chrUextra 17481120 17481278 -11523378 + LSU-rRNA_Dme rRNA rRNA 1629 1788 -2112 9 718 4296 2 0 2 chrUextra 17481322 17481819 -11522837 + LSU-rRNA_Dme rRNA rRNA 1788 2283 -1617 9 718 5976 0 3 4 chrUextra 17481919 17482618 -11522038 - SSU-rRNA_Dme rRNA rRNA -185 1810 1113 9 718 5885 0 1 3 chrUextra 17482718 17483417 -11521239 + ROO_I LTR Pao 1699 2396 -5860 9 718 22 0 0 0 chrUextra 17484100 17484122 -11520534 + AT_rich Low_complexity Low_complexity 1 22 0 9 718 5567 42 0 0 chrUextra 17485115 17485814 -11518842 + DIVER_I LTR Pao 3090 3788 -1855 9 718 3231 169 6 10 chrUextra 17485926 17486608 -11518048 + SAR_DM Satellite Satellite 369 1047 -425 9 718 3186 165 11 15 chrUextra 17486717 17487411 -11517245 - SAR_DM Satellite Satellite -1109 690 1 9 718 771 121 0 85 chrUextra 17487514 17487667 -11516989 + DM176_I LTR Gypsy 6281 6420 0 9 718 235 190 17 17 chrUextra 17487901 17487960 -11516696 + DM176_LTR LTR Gypsy 308 366 -141 9 718 552 148 40 16 chrUextra 17487977 17488101 -11516555 + DMTOM1_LTR LTR Gypsy 284 410 0 9 718 388 100 14 28 chrUextra 17488101 17488164 -11516492 + DMTOM1_LTR LTR Gypsy 349 410 0 9 718 248 172 17 17 chrUextra 17488454 17488513 -11516143 + DM176_LTR LTR Gypsy 308 366 -141 9 718 552 148 40 16 chrUextra 17488530 17488654 -11516002 + DMTOM1_LTR LTR Gypsy 284 410 0 9 718 388 100 14 28 chrUextra 17488654 17488717 -11515939 + DMTOM1_LTR LTR Gypsy 349 410 0 9 718 301 223 23 76 chrUextra 17488717 17488848 -11515808 + ROVER-I_DM LTR Gypsy 1 124 -6460 9 718 23 0 0 0 chrUextra 17488966 17488989 -11515667 + AT_rich Low_complexity Low_complexity 1 23 0 9 718 5578 19 1 0 chrUextra 17489107 17489805 -11514851 + TART LINE telomeric 8857 9555 -4922 9 718 6157 0 0 0 chrUextra 17489905 17490603 -11514053 - R2_DM LINE R2 -1432 2175 1478 9 718 2579 32 6 6 chrUextra 17491058 17491401 -11513255 + CIRCE LINE Composite 4981 5323 -1033 9 718 5006 39 0 0 chrUextra 17491560 17492199 -11512457 - G2_DM LINE Jockey 0 3102 2464 9 718 1683 166 11 3 chrUextra 17492303 17492660 -11511996 - SAR_DM Satellite Satellite -577 895 536 9 718 1644 77 35 24 chrUextra 17492663 17492997 -11511659 + Gypsy6A_LTR LTR Gypsy 1 337 -83 9 718 34 24 0 0 chrUextra 17493643 17493684 -11510972 + AT_rich Low_complexity Low_complexity 1 41 0 9 718 722 0 12 0 chrUextra 17493895 17493981 -11510675 + LSU-rRNA_Dme rRNA rRNA 3814 3900 0 9 718 29 28 0 0 chrUextra 17494053 17494089 -11510567 + AT_rich Low_complexity Low_complexity 1 36 0 9 718 246 150 0 0 chrUextra 17494094 17494134 -11510522 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 246 150 0 0 chrUextra 17494186 17494226 -11510430 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 246 150 0 0 chrUextra 17494278 17494318 -11510338 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 255 125 0 0 chrUextra 17494361 17494401 -11510255 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 22 56 0 0 chrUextra 17494414 17494450 -11510206 + AT_rich Low_complexity Low_complexity 1 36 0 9 718 870 9 0 27 chrUextra 17494476 17494588 -11510068 + NTS_DM Other Other 25 133 -107 9 718 2874 179 9 8 chrUextra 17494693 17495352 -11509304 - SAR_DM Satellite Satellite -621 851 192 9 718 809 112 0 0 chrUextra 17495257 17495391 -11509265 + ARS406_DM Unknown Unknown 2 135 -218 9 718 2873 191 12 20 chrUextra 17495493 17496185 -11508471 - SAR_DM Satellite Satellite -633 686 1 9 718 385 0 63 48 chrUextra 17496289 17496352 -11508304 + NTS_DM Other Other 177 240 0 9 718 1734 21 17 17 chrUextra 17496352 17496592 -11508064 + NTS_DM Other Other 1 240 0 9 718 1731 21 17 17 chrUextra 17496592 17496832 -11507824 + NTS_DM Other Other 1 240 0 9 718 1183 19 7 7 chrUextra 17496832 17496987 -11507669 + NTS_DM Other Other 1 155 -85 9 718 5311 48 0 0 chrUextra 17497116 17497785 -11506871 - BATUMI_I LTR Pao -3642 4321 3653 9 718 4350 43 73 6 chrUextra 17497885 17498583 -11506073 - BATUMI_I LTR Pao -2590 5373 4629 9 718 5826 17 1 0 chrUextra 17498683 17499381 -11505275 - BATUMI_I LTR Pao -2496 5467 4769 9 718 4461 4 0 0 chrUextra 17499481 17500000 -11504656 + FW_DM LINE Jockey 4155 4673 -19 9 718 21 0 0 0 chrUextra 17500007 17500028 -11504628 + AT_rich Low_complexity Low_complexity 1 21 0 9 718 857 146 0 0 chrUextra 17500028 17500179 -11504477 + S_DM DNA Tc1 1380 1530 -206 9 718 3518 160 16 14 chrUextra 17500279 17500977 -11503679 - SAR_DM Satellite Satellite -472 1000 302 9 718 572 58 151 0 chrUextra 17501169 17501255 -11503401 + MAX_I LTR Pao 1256 1354 -6560 9 718 3640 65 41 28 chrUextra 17501239 17501775 -11502881 + MAX_I LTR Pao 1217 1759 -6155 9 718 1043 7 14 0 chrUextra 17501880 17502020 -11502636 + DOC LINE Jockey 4584 4725 0 9 718 285 106 0 21 chrUextra 17502209 17502257 -11502399 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 718 376 49 65 16 chrUextra 17502279 17502341 -11502315 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 718 964 178 102 15 chrUextra 17502340 17502545 -11502111 - DMLTR5 LTR Gypsy 0 266 44 9 718 4631 4 0 0 chrUextra 17502673 17503177 -11501479 + NOMAD_LTR LTR Gypsy 15 518 0 9 718 1775 0 0 0 chrUextra 17503177 17503371 -11501285 + NOMAD_I LTR Gypsy 1 194 -6378 9 718 189 0 0 0 chrUextra 17503478 17503499 -11501157 + (A)n Simple_repeat Simple_repeat 1 21 0 9 718 895 140 66 32 chrUextra 17503519 17503831 -11500825 + HETA LINE telomeric 5965 6076 -5 9 718 1162 182 11 42 chrUextra 17503844 17504169 -11500487 + TAHRE LINE telomeric 18 607 -5474 9 718 3478 12 0 71 chrUextra 17504269 17504707 -11499949 + MICROPIA_LTR LTR Gypsy 70 476 0 9 718 2319 16 0 4 chrUextra 17504707 17504967 -11499689 + MICROPIA_I LTR Gypsy 1 259 -4217 9 718 6060 23 0 1 chrUextra 17505067 17505765 -11498891 - R1_DM LINE R1 -2525 2831 2135 9 718 1028 9 0 0 chrUextra 17505865 17505976 -11498680 + R1_DM LINE R1 5246 5356 0 9 718 5452 3 0 2 chrUextra 17505974 17506563 -11498093 + LSU-rRNA_Dme rRNA rRNA 2640 3227 -673 9 718 6454 0 1 1 chrUextra 17506666 17507361 -11497295 - LSU-rRNA_Dme rRNA rRNA -485 3415 2721 9 718 459 188 0 0 chrUextra 17507461 17507578 -11497078 + (AATAG)n Simple_repeat Simple_repeat 2 118 0 9 718 6045 19 9 0 chrUextra 17508259 17508957 -11495699 + NINJA_I LTR Pao 2521 3224 -2787 9 718 1246 0 0 0 chrUextra 17509127 17509262 -11495394 + 5S_DM RNA RNA 1 135 0 9 718 1236 7 0 0 chrUextra 17509496 17509631 -11495025 + 5S_DM RNA RNA 1 135 0 9 718 6290 14 0 3 chrUextra 17509855 17510553 -11494103 + Invader1_I LTR Gypsy 267 962 -2224 9 718 5157 100 0 0 chrUextra 17510653 17511351 -11493305 + HETA LINE telomeric 2147 2844 -3237 9 718 2192 189 81 28 chrUextra 17511451 17512145 -11492511 - SAR_DM Satellite Satellite -425 730 1 9 718 247 65 0 0 chrUextra 17512118 17512149 -11492507 + ARS406_DM Unknown Unknown 1 31 -322 9 718 235 0 0 158 chrUextra 17512742 17512926 -11491730 + (ACTAG)n Simple_repeat Simple_repeat 4 158 0 9 718 622 45 0 136 chrUextra 17513047 17513150 -11491506 + Baggins1 LINE LOA 5365 5453 0 9 718 1258 50 6 0 chrUextra 17513586 17513745 -11490911 + Baggins1 LINE LOA 4791 4950 -503 9 718 2726 50 6 0 chrUextra 17514204 17514543 -11490113 + Baggins1 LINE LOA 4791 5131 -322 9 718 582 28 0 0 chrUextra 17515269 17515341 -11489315 + (GAGAA)n Simple_repeat Simple_repeat 4 75 0 9 718 3538 164 10 9 chrUextra 17516244 17516937 -11487719 + SAR_DM Satellite Satellite 326 1019 -453 9 718 3340 163 32 13 chrUextra 17517037 17517728 -11486928 + SAR_DM Satellite Satellite 353 1056 -416 9 718 255 93 0 0 chrUextra 17518225 17518268 -11486388 + (CATCT)n Simple_repeat Simple_repeat 3 45 0 9 718 1554 23 0 0 chrUextra 17518274 17518533 -11486123 + (TTCTC)n Simple_repeat Simple_repeat 1 259 0 9 718 6516 3 0 0 chrUextra 17518633 17519331 -11485325 - LSU-rRNA_Dme rRNA rRNA -498 3402 2705 9 718 3205 179 12 8 chrUextra 17520229 17520897 -11483759 - SAR_DM Satellite Satellite -622 850 180 9 718 903 103 0 0 chrUextra 17520791 17520927 -11483729 + ARS406_DM Unknown Unknown 1 136 -217 9 718 2778 43 8 17 chrUextra 17521825 17522183 -11482473 - BATUMI_I LTR Pao -5695 2268 1914 9 718 2668 48 3 15 chrUextra 17522181 17522523 -11482133 - BATUMI_I LTR Pao -5891 2072 1735 9 718 32 0 0 0 chrUextra 17522815 17522847 -11481809 + AT_rich Low_complexity Low_complexity 1 32 0 9 718 3187 3 0 0 chrUextra 17522979 17523321 -11481335 + SSU-rRNA_Dme rRNA rRNA 1 342 -1653 9 718 492 95 0 0 chrUextra 17524035 17524119 -11480537 + (CAAGA)n Simple_repeat Simple_repeat 2 85 0 9 718 264 241 24 24 chrUextra 17524225 17524310 -11480346 + Copia_I LTR Copia 4428 4512 -81 9 718 3196 39 44 0 chrUextra 17525017 17525406 -11479250 - PROTOP DNA P -4074 406 1 9 718 1056 8 0 0 chrUextra 17525815 17525936 -11478720 + (TATTG)n Simple_repeat Simple_repeat 4 124 0 9 718 6357 11 0 0 chrUextra 17526613 17527311 -11477345 - BLOOD_I LTR Gypsy -2077 4536 3839 9 718 1599 6 0 0 chrUextra 17527430 17527610 -11477046 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 9 718 3133 194 6 14 chrUextra 17528216 17528907 -11475749 - SAR_DM Satellite Satellite -532 940 256 9 718 921 124 92 10 chrUextra 17529007 17529202 -11475454 + DNAREP1_DM LINE Penelope 87 297 -297 9 718 2345 38 24 0 chrUextra 17530603 17530896 -11473760 + IDEFIX_LTR LTR Gypsy 17 316 -278 9 718 21 0 0 0 chrUextra 17530896 17530917 -11473739 + AT_rich Low_complexity Low_complexity 1 21 0 9 718 2924 32 3 6 chrUextra 17530919 17531269 -11473387 - CIRCE LINE Composite -1027 5329 4981 9 718 2978 230 3 4 chrUextra 17531405 17532095 -11472561 + DM412 LTR Gypsy 5492 6180 -717 9 718 6432 0 0 0 chrUextra 17532199 17532897 -11471759 - R1_DM LINE R1 -2513 2843 2146 9 718 247 0 0 0 chrUextra 17532997 17533025 -11471631 + DM297_I LTR Gypsy 6140 6167 0 9 718 3614 5 7 7 chrUextra 17533025 17533439 -11471217 + DM297_LTR LTR Gypsy 1 414 0 9 718 1880 5 0 0 chrUextra 17533492 17533695 -11470961 + SSU-rRNA_Dme rRNA rRNA 1 203 -1792 9 718 6399 76 8 8 chrUextra 17533795 17534636 -11470020 - Gypsy4_I LTR Gypsy -3020 3268 2570 9 718 4315 2 0 0 chrUextra 17534593 17535056 -11469600 - LSU-rRNA_Dme rRNA rRNA -1650 2250 1788 9 718 1610 5 10 10 chrUextra 17535097 17535291 -11469365 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1598 9 718 2594 109 44 19 chrUextra 17535391 17535802 -11468854 + Invader1_LTR LTR Gypsy 3 423 0 9 718 281 203 108 0 chrUextra 17535874 17535948 -11468708 - HMSBEAGLE_I LTR Gypsy -5951 578 497 9 718 420 155 9 46 chrUextra 17535980 17536088 -11468568 - HMSBEAGLE_I LTR Gypsy -6030 499 396 9 718 3481 23 5 2 chrUextra 17536189 17536587 -11468069 - Gypsy_LTR LTR Gypsy -83 399 1 9 718 239 252 7 66 chrUextra 17536589 17536725 -11467931 - ROVER-I_DM LTR Gypsy -5607 977 850 9 718 1047 43 0 7 chrUextra 17536746 17536887 -11467769 - LOOPER1_DM DNA PiggyBac -1529 352 213 9 718 6472 1 1 1 chrUextra 17536987 17537685 -11466971 + LSU-rRNA_Dme rRNA rRNA 2958 3655 -245 9 718 5189 40 2 0 chrUextra 17537874 17538480 -11466176 + Baggins1 LINE LOA 4791 5397 -56 9 718 2540 267 1 3 chrUextra 17538583 17539279 -11465377 - ROVER-I_DM LTR Gypsy -2628 3956 3262 9 718 3138 6 0 3 chrUextra 17539381 17539732 -11464924 - R1_DM LINE R1 -207 5149 4800 9 718 585 0 0 0 chrUextra 17539739 17539802 -11464854 - R1_DM LINE R1 0 5356 5294 9 718 2601 4 0 0 chrUextra 17539800 17540079 -11464577 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2378 9 718 3499 170 10 9 chrUextra 17540179 17540874 -11463782 + SAR_DM Satellite Satellite 352 1047 -425 9 718 6122 22 0 7 chrUextra 17540977 17541675 -11462981 + BATUMI_I LTR Pao 5425 6117 -1846 9 718 1880 5 0 0 chrUextra 17541775 17541978 -11462678 - SSU-rRNA_Dme rRNA rRNA -1792 203 1 9 718 32 0 0 0 chrUextra 17542110 17542142 -11462514 + AT_rich Low_complexity Low_complexity 1 32 0 9 718 2218 175 54 29 chrUextra 17542577 17543271 -11461385 - SAR_DM Satellite Satellite -479 711 1 9 718 3368 171 9 9 chrUextra 17543390 17544069 -11460587 + SAR_DM Satellite Satellite 326 1004 -468 9 718 1263 276 34 29 chrUextra 17544169 17544866 -11459790 - STALKER4_I LTR Gypsy -3070 3460 2760 9 718 6261 0 1 3 chrUextra 17544967 17545665 -11458991 + ROO_I LTR Pao 2717 3413 -4843 1 718 3278 177 13 8 chrUextra 17545765 17546436 -11458220 + SAR_DM Satellite Satellite 402 1076 -396 1 718 37 39 0 0 chrUextra 17546850 17546901 -11457755 + AT_rich Low_complexity Low_complexity 1 51 0 1 718 22 35 0 0 chrUextra 17547002 17547031 -11457625 + AT_rich Low_complexity Low_complexity 1 29 0 1 718 3266 183 10 9 chrUextra 17547361 17548051 -11456605 + SAR_DM Satellite Satellite 268 958 -514 1 718 2796 22 9 0 chrUextra 17548159 17548478 -11456178 - CIRCE LINE Composite -6034 322 1 1 718 3223 37 21 0 chrUextra 17548478 17548857 -11455799 - CIRCE LINE Composite 0 6356 5970 1 718 6146 0 0 0 chrUextra 17548981 17549655 -11455001 + LSU-rRNA_Dme rRNA rRNA 218 891 -3009 1 718 28 48 0 0 chrUextra 17550077 17550119 -11454537 + AT_rich Low_complexity Low_complexity 1 42 0 1 718 392 115 49 0 chrUextra 17550392 17550453 -11454203 - NTS_DM Other Other -150 90 27 1 718 3804 2 0 2 chrUextra 17550553 17550999 -11453657 + Invader2_I LTR Gypsy 4148 4592 0 1 718 2332 4 0 0 chrUextra 17550999 17551251 -11453405 + Invader2_LTR LTR Gypsy 1 252 -14 1 718 6244 6 7 7 chrUextra 17551351 17552049 -11452607 + CIRCE LINE Composite 1782 2479 -3877 1 718 606 22 43 43 chrUextra 17552149 17552243 -11452413 + NTS_DM Other Other 147 240 0 1 718 1845 30 17 17 chrUextra 17552243 17552483 -11452173 + NTS_DM Other Other 1 240 0 1 718 1210 8 0 0 chrUextra 17552483 17552616 -11452040 + NTS_DM Other Other 1 133 -107 1 718 1350 18 0 6 chrUextra 17552616 17552781 -11451875 + NTS_DM Other Other 38 201 -39 1 718 21 57 0 0 chrUextra 17552781 17552816 -11451840 + AT_rich Low_complexity Low_complexity 1 35 0 1 718 6122 23 14 1 chrUextra 17552947 17553645 -11451011 - MAX_I LTR Pao -1026 6888 6182 1 718 6391 11 0 0 chrUextra 17554543 17555241 -11449415 + Copia2_I LTR Copia 1568 2265 -1897 1 718 4824 22 4 2 chrUextra 17555348 17555902 -11448754 - PROTOP_A DNA P -550 555 1 1 718 1102 51 7 7 chrUextra 17555902 17556039 -11448617 - PROTOP_A DNA P -31 1074 938 1 718 6100 19 3 3 chrUextra 17556139 17556837 -11447819 - NINJA_I LTR Pao -2487 3524 2827 1 718 6420 0 0 0 chrUextra 17557735 17558433 -11446223 - MAX_I LTR Pao -1368 6546 5849 1 718 5755 37 0 0 chrUextra 17558534 17559231 -11445425 - IDEFIX_I LTR Gypsy -3866 1762 1066 1 718 5959 3 7 0 chrUextra 17559331 17560029 -11444627 + DM176_I LTR Gypsy 1290 1992 -4428 1 718 6144 3 0 0 chrUextra 17560129 17560827 -11443829 - Copia_I LTR Copia -2090 2503 1806 1 718 4422 67 10 2 chrUextra 17560927 17561536 -11443120 + IDEFIX_I LTR Gypsy 3574 4187 -1441 1 718 326 25 0 0 chrUextra 17561535 17561575 -11443081 - IDEFIX_I LTR Gypsy -1394 4234 4195 1 718 288 0 0 0 chrUextra 17561587 17561625 -11443031 - IDEFIX_I LTR Gypsy -1191 4437 4400 1 718 2470 87 14 42 chrUextra 17561725 17562423 -11442233 + DMSAT6 Satellite Satellite 1 678 -114 1 718 5984 9 39 0 chrUextra 17562523 17563221 -11441435 - Invader4_I LTR Gypsy -884 1529 805 1 89 3193 176 9 9 chrUextra 17563321 17563996 -11440660 - SAR_DM Satellite Satellite -472 1000 326 1 719 5663 16 63 1 chrUextra 17564119 17564817 -11439839 - Gypsy4_I LTR Gypsy -1269 5019 4279 1 719 3025 190 19 24 chrUextra 17564918 17565615 -11439041 - SAR_DM Satellite Satellite -634 693 1 1 719 2574 210 43 9 chrUextra 17565716 17566411 -11438245 - SAR_DM Satellite Satellite -563 909 191 1 719 6170 7 0 0 chrUextra 17566513 17567211 -11437445 + QUASIMODO_I LTR Gypsy 2458 3155 -2905 1 719 2961 0 3 0 chrUextra 17567311 17567635 -11437021 + SSU-rRNA_Dme rRNA rRNA 1671 1995 0 1 719 21 89 0 0 chrUextra 17567654 17567710 -11436946 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 2666 3 13 0 chrUextra 17568109 17568408 -11436248 + SSU-rRNA_Dme rRNA rRNA 1693 1995 0 1 719 2435 107 26 65 chrUextra 17568909 17569369 -11435287 + TART LINE telomeric 2921 3362 -11115 1 719 1298 124 0 28 chrUextra 17569364 17569578 -11435078 + TART LINE telomeric 3683 3890 -10587 1 719 226 0 0 0 chrUextra 17569578 17569605 -11435051 - PROTOP_A DNA P -1 1104 1078 1 719 1424 96 6 7 chrUextra 17569708 17569930 -11434726 + MDG1_I LTR Gypsy 781 1138 -5458 1 719 2853 63 82 0 chrUextra 17569976 17570403 -11434253 + MDG1_I LTR Gypsy 1134 1595 -5001 1 719 2650 174 7 3 chrUextra 17570503 17571197 -11433459 - SAR_DM Satellite Satellite -685 696 1 1 719 2867 195 7 22 chrUextra 17571303 17571995 -11432661 - SAR_DM Satellite Satellite -359 1113 432 1 719 2043 178 7 9 chrUextra 17572099 17572797 -11431859 + SAR_DM Satellite Satellite 1 697 -396 1 719 3634 53 47 2 chrUextra 17573103 17573594 -11431062 - PROTOP_A DNA P 0 1105 593 1 719 267 0 0 0 chrUextra 17573695 17573725 -11430931 - SSU-rRNA_Dme rRNA rRNA -1965 30 1 1 719 32 0 0 0 chrUextra 17573857 17573889 -11430767 + AT_rich Low_complexity Low_complexity 1 32 0 1 719 28 48 0 0 chrUextra 17574218 17574260 -11430396 + AT_rich Low_complexity Low_complexity 1 42 0 1 719 631 155 160 15 chrUextra 17574493 17574624 -11430032 - DMLTR5 LTR Gypsy -73 193 44 1 719 377 261 114 96 chrUextra 17574832 17575112 -11429544 + Invader1_LTR LTR Gypsy 84 368 -55 1 719 6333 1 0 1 chrUextra 17575291 17575989 -11428667 - LSU-rRNA_Dme rRNA rRNA -1376 2524 1828 1 719 367 0 0 0 chrUextra 17576089 17576130 -11428526 - R1_DM LINE R1 -5315 41 1 1 719 5971 3 0 0 chrUextra 17576130 17576787 -11427869 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1976 1 719 6222 4 0 0 chrUextra 17576887 17577585 -11427071 - FW_DM LINE Jockey -2409 2283 1586 1 719 21 57 0 0 chrUextra 17577698 17577733 -11426923 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 269 125 0 0 chrUextra 17577746 17577786 -11426870 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17577829 17577869 -11426787 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17577921 17577961 -11426695 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17578013 17578053 -11426603 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 22 56 0 0 chrUextra 17578058 17578094 -11426562 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 1986 0 0 0 chrUextra 17578166 17578383 -11426273 - LSU-rRNA_Dme rRNA rRNA 0 3900 3684 1 719 6023 19 1 1 chrUextra 17578483 17579181 -11425475 - R1_DM LINE R1 -1448 3908 3211 1 719 774 11 0 31 chrUextra 17579281 17579377 -11425279 - NTS_DM Other Other -123 117 25 1 719 22 56 0 0 chrUextra 17579403 17579439 -11425217 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 269 125 0 0 chrUextra 17579452 17579492 -11425164 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17579535 17579575 -11425081 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17579627 17579667 -11424989 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 22 56 0 0 chrUextra 17579672 17579708 -11424948 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 1774 10 0 0 chrUextra 17579780 17579979 -11424677 - LSU-rRNA_Dme rRNA rRNA 0 3900 3702 1 719 3361 0 0 3 chrUextra 17580079 17580450 -11424206 + LSU-rRNA_Dme rRNA rRNA 3531 3900 0 1 719 22 56 0 0 chrUextra 17580522 17580558 -11424098 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 262 150 0 0 chrUextra 17580563 17580603 -11424053 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 719 262 150 0 0 chrUextra 17580655 17580695 -11423961 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 719 5692 19 9 6 chrUextra 17580877 17581575 -11423081 - PROTOP_A DNA P -9 1096 397 1 719 5708 20 9 0 chrUextra 17581675 17582373 -11422283 - PROTOP_A DNA P -163 942 239 1 719 5992 7 0 0 chrUextra 17582473 17583171 -11421485 + STALKER4_I LTR Gypsy 3073 3770 -2760 1 719 5381 27 33 4 chrUextra 17583271 17583969 -11420687 - STALKER4_I LTR Gypsy -2868 3662 2945 1 719 655 50 0 0 chrUextra 17584069 17584149 -11420507 - G5A_DM LINE Jockey -301 2540 2461 1 719 4818 19 3 0 chrUextra 17584145 17584714 -11419942 - DOC2_DM LINE Jockey -3332 1461 891 1 719 2657 23 0 0 chrUextra 17584867 17585172 -11419484 + R1_DM LINE R1 5052 5356 0 1 719 2547 75 47 6 chrUextra 17585205 17585565 -11419091 + R1_DM LINE R1 1 375 -4981 1 719 3497 157 11 13 chrUextra 17585665 17586363 -11418293 + SAR_DM Satellite Satellite 346 1042 -430 1 719 21 89 0 0 chrUextra 17586924 17586980 -11417676 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 1447 0 0 6 chrUextra 17586999 17587161 -11417495 - SSU-rRNA_Dme rRNA rRNA 0 1995 1835 1 719 23 68 0 0 chrUextra 17587521 17587565 -11417091 + AT_rich Low_complexity Low_complexity 1 44 0 1 719 26 30 0 0 chrUextra 17587611 17587644 -11417012 + AT_rich Low_complexity Low_complexity 1 33 0 1 719 2253 167 91 7 chrUextra 17588059 17588498 -11416158 - FW_DM LINE Jockey -3191 1501 1026 1 719 1633 55 18 0 chrUextra 17588498 17588717 -11415939 + FB4_DM DNA Tc1 1 223 -3866 1 719 307 43 22 0 chrUextra 17588711 17588757 -11415899 + DMCR1A LINE CR1 1406 1452 -3018 1 719 758 96 0 0 chrUextra 17588858 17588973 -11415683 - ARS406_DM Unknown Unknown -238 115 1 1 719 3264 181 4 4 chrUextra 17588880 17589555 -11415101 + SAR_DM Satellite Satellite 195 869 -603 1 719 4572 39 28 0 chrUextra 17589655 17590270 -11414386 + PROTOP DNA P 192 823 -3657 1 719 672 23 0 0 chrUextra 17590265 17590353 -11414303 + PROTOP DNA P 3802 3889 -591 1 719 430 0 0 0 chrUextra 17590453 17590512 -11414144 + IDEFIX_LTR LTR Gypsy 536 594 0 1 719 25 0 0 0 chrUextra 17590701 17590726 -11413930 + AT_rich Low_complexity Low_complexity 1 25 0 1 719 708 104 0 0 chrUextra 17591251 17591357 -11413299 - ARS406_DM Unknown Unknown -247 106 1 1 719 3253 174 7 9 chrUextra 17591264 17591949 -11412707 + SAR_DM Satellite Satellite 195 878 -594 1 719 2829 190 10 20 chrUextra 17592049 17592747 -11411909 + SAR_DM Satellite Satellite 1 691 -308 1 719 6281 1 3 1 chrUextra 17592847 17593545 -11411111 - SSU-rRNA_Dme rRNA rRNA -703 1292 594 1 719 6023 9 0 0 chrUextra 17593645 17594343 -11410313 - ROO_I LTR Pao -3151 5105 4408 1 719 290 28 0 0 chrUextra 17594479 17594515 -11410141 + MAX_I LTR Pao 920 955 -6959 1 719 1351 102 97 253 chrUextra 17594553 17595141 -11409515 + MAX_I LTR Pao 938 1433 -6481 1 719 6259 1 3 3 chrUextra 17595241 17595939 -11408717 - SSU-rRNA_Dme rRNA rRNA -248 1747 1050 1 719 5851 1 39 0 chrUextra 17596039 17596737 -11407919 + DM176_I LTR Gypsy 1267 1991 -4429 1 719 21 89 0 0 chrUextra 17596939 17596995 -11407661 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 21 57 0 0 chrUextra 17597033 17597068 -11407588 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 6285 0 3 3 chrUextra 17597635 17598333 -11406323 + SSU-rRNA_Dme rRNA rRNA 997 1694 -301 1 719 6381 1 0 0 chrUextra 17598433 17599131 -11405525 - SSU-rRNA_Dme rRNA rRNA -930 1065 368 1 719 453 141 0 0 chrUextra 17599231 17599302 -11405354 + ARS406_DM Unknown Unknown 119 189 -164 1 719 2493 191 93 29 chrUextra 17599239 17599929 -11404727 - SAR_DM Satellite Satellite -242 1230 497 1 719 3028 23 0 0 chrUextra 17600035 17600381 -11404275 + Invader4_LTR LTR Gypsy 1 346 0 1 719 21 0 0 0 chrUextra 17600381 17600402 -11404254 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 551 0 131 6 chrUextra 17600402 17600723 -11403933 + (TA)n Simple_repeat Simple_repeat 1 361 0 1 719 273 83 0 0 chrUextra 17600845 17600881 -11403775 + PROTOP DNA P 1376 1411 -3069 1 719 2964 50 0 8 chrUextra 17600878 17601261 -11403395 + PROTOP_A DNA P 650 1029 -76 1 719 1559 55 45 0 chrUextra 17601288 17601490 -11403166 - PROTOP_B DNA P -942 211 1 1 719 254 111 0 0 chrUextra 17601490 17601524 -11403132 + PROTOP DNA P 4420 4454 -26 1 719 3312 164 19 10 chrUextra 17601629 17602323 -11402333 + SAR_DM Satellite Satellite 369 1068 -404 1 719 6016 16 1 0 chrUextra 17602423 17603121 -11401535 - PROTOP DNA P -2764 1716 1018 1 719 6295 0 1 3 chrUextra 17603221 17603919 -11400737 + SSU-rRNA_Dme rRNA rRNA 686 1382 -613 1 719 6250 0 1 4 chrUextra 17604019 17604717 -11399939 - SSU-rRNA_Dme rRNA rRNA -601 1394 699 1 719 3036 34 39 3 chrUextra 17605132 17605515 -11399141 - ROO_I LTR Pao -2366 5890 5494 1 719 6284 0 0 0 chrUextra 17605615 17606313 -11398343 - DOC LINE Jockey -2940 1785 1088 1 719 6260 0 0 0 chrUextra 17606413 17607111 -11397545 - DOC LINE Jockey -2821 1904 1207 1 719 2078 59 114 0 chrUextra 17607211 17607725 -11396931 - PROTOP DNA P -243 862 421 1 719 1621 22 0 0 chrUextra 17607725 17607909 -11396747 - PROTOP DNA P 0 4480 4297 1 719 6221 7 7 0 chrUextra 17608010 17608707 -11395949 - Gypsy3_I LTR Gypsy -4397 1780 1079 1 719 277 106 0 21 chrUextra 17608872 17608920 -11395736 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 719 372 49 65 16 chrUextra 17608942 17609004 -11395652 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 719 969 173 102 15 chrUextra 17609003 17609208 -11395448 - DMLTR5 LTR Gypsy 0 266 44 1 719 2445 110 25 13 chrUextra 17609607 17610288 -11394368 - DMSAT6 Satellite Satellite -28 689 1 1 719 454 120 0 62 chrUextra 17610418 17610498 -11394158 + ACCORD2_LTR LTR Gypsy 141 215 0 1 719 2946 79 0 0 chrUextra 17610698 17611092 -11393564 + PROTOP DNA P 2614 3007 -1473 1 719 357 315 0 0 chrUextra 17611265 17611614 -11393042 + (CAGA)n Simple_repeat Simple_repeat 1 349 0 1 719 2804 62 0 5 chrUextra 17612023 17612411 -11392245 - BATUMI_I LTR Pao 0 7963 7578 1 719 1960 77 47 3 chrUextra 17612398 17612697 -11391959 + MDG1_I LTR Gypsy 5303 5614 -982 1 719 2904 168 11 27 chrUextra 17612800 17613493 -11391163 + SAR_DM Satellite Satellite 432 1113 -359 1 719 668 48 0 0 chrUextra 17613595 17613678 -11390978 - R1_DM LINE R1 -31 5325 5243 1 719 5089 24 3 0 chrUextra 17613675 17614293 -11390363 - R1_DM LINE R1 -290 5066 4447 1 719 22 0 0 0 chrUextra 17614489 17614511 -11390145 + AT_rich Low_complexity Low_complexity 1 22 0 1 719 2141 180 47 34 chrUextra 17614538 17615090 -11389566 + Stalker2_I LTR Gypsy 291 849 -6553 1 719 2926 172 8 33 chrUextra 17615208 17615889 -11388767 - SAR_DM Satellite Satellite -1109 663 1 1 719 1369 0 0 6 chrUextra 17616787 17616955 -11387701 - NTS_DM Other Other -73 167 1 1 719 1252 18 0 6 chrUextra 17617037 17617202 -11387454 - NTS_DM Other Other -39 201 38 1 719 870 9 0 27 chrUextra 17617202 17617314 -11387342 - NTS_DM Other Other -107 133 25 1 719 22 56 0 0 chrUextra 17617340 17617376 -11387280 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 255 125 0 0 chrUextra 17617389 17617429 -11387227 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 1867 225 0 0 chrUextra 17617585 17618034 -11386622 - BLOOD_I LTR Gypsy -1883 4730 4282 1 719 1419 166 20 7 chrUextra 17618385 17618688 -11385968 + SAR_DM Satellite Satellite 597 903 -569 1 719 657 53 53 0 chrUextra 17618603 17618698 -11385958 - ARS406_DM Unknown Unknown -164 189 90 1 719 1598 184 19 5 chrUextra 17618703 17619081 -11385575 + SAR_DM Satellite Satellite 496 878 -594 1 719 959 22 0 7 chrUextra 17619181 17619318 -11385338 + NTS_DM Other Other 66 201 -39 1 719 870 9 0 27 chrUextra 17619370 17619482 -11385174 + NTS_DM Other Other 25 133 -107 1 719 1252 18 0 6 chrUextra 17619482 17619647 -11385009 + NTS_DM Other Other 38 201 -39 1 719 848 18 0 27 chrUextra 17619699 17619811 -11384845 + NTS_DM Other Other 25 133 -107 1 719 588 0 0 0 chrUextra 17619811 17619879 -11384777 + NTS_DM Other Other 38 105 -135 1 719 482 17 17 0 chrUextra 17619979 17620039 -11384617 - NTS_DM Other Other -179 61 1 1 719 1387 25 20 20 chrUextra 17620039 17620242 -11384414 - NTS_DM Other Other 0 240 38 1 719 817 0 0 0 chrUextra 17620242 17620338 -11384318 - NTS_DM Other Other -107 133 38 1 719 832 9 9 27 chrUextra 17620338 17620449 -11384207 - NTS_DM Other Other -107 133 25 1 719 21 57 0 0 chrUextra 17620475 17620510 -11384146 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 1215 18 6 6 chrUextra 17620510 17620674 -11383982 - NTS_DM Other Other -39 201 38 1 719 23 68 0 0 chrUextra 17621165 17621209 -11383447 + AT_rich Low_complexity Low_complexity 1 44 0 1 719 2003 13 0 0 chrUextra 17621575 17621814 -11382842 - DM1731_I LTR Copia -1838 2138 1900 1 719 3971 9 0 2 chrUextra 17621809 17622273 -11382383 - DM1731_I LTR Copia -2476 1500 1038 1 719 5781 0 0 1 chrUextra 17622373 17623056 -11381600 - LSU-rRNA_Dme rRNA rRNA -3001 899 218 1 719 243 125 0 0 chrUextra 17623222 17623262 -11381394 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 719 22 56 0 0 chrUextra 17623275 17623311 -11381345 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 870 9 0 27 chrUextra 17623337 17623449 -11381207 + NTS_DM Other Other 25 133 -107 1 719 1252 18 0 6 chrUextra 17623449 17623614 -11381042 + NTS_DM Other Other 38 201 -39 1 719 840 9 0 35 chrUextra 17623666 17623779 -11380877 + NTS_DM Other Other 25 133 -107 1 719 770 0 0 0 chrUextra 17623779 17623869 -11380787 + NTS_DM Other Other 38 127 -113 1 719 5482 46 1 1 chrUextra 17624767 17625465 -11379191 + R1_DM LINE R1 1059 1756 -3600 1 719 3015 181 7 10 chrUextra 17625565 17626259 -11378397 - SAR_DM Satellite Satellite -569 903 212 1 719 5901 0 1 0 chrUextra 17626363 17627061 -11377595 - ROO_I LTR Pao -4541 3715 3017 1 719 5831 9 1 0 chrUextra 17627959 17628657 -11375999 + STALKER4_I LTR Gypsy 1973 2671 -3859 1 719 2983 176 7 12 chrUextra 17628757 17629434 -11375222 + SAR_DM Satellite Satellite 403 1076 -396 1 719 5828 10 0 0 chrUextra 17629555 17630253 -11374403 - STALKER4_I LTR Gypsy -3943 2587 1890 1 719 1469 121 57 3 chrUextra 17630384 17630666 -11373990 + DNAREP1_DM LINE Penelope 1 297 -297 1 719 1109 36 42 12 chrUextra 17631949 17632117 -11372539 + (TTCTC)n Simple_repeat Simple_repeat 1 173 0 1 719 651 46 0 0 chrUextra 17632132 17632219 -11372437 + (GAGAA)n Simple_repeat Simple_repeat 2 88 0 1 719 22 56 0 0 chrUextra 17632808 17632844 -11371812 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 952 16 8 0 chrUextra 17633545 17633666 -11370990 + R2_DM LINE R2 3486 3607 0 1 719 433 55 0 0 chrUextra 17633665 17633720 -11370936 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 719 3529 55 55 4 chrUextra 17633720 17634213 -11370443 + R1_DM LINE R1 1 518 -4838 1 719 5803 9 1 0 chrUextra 17635141 17635839 -11368817 - STALKER4_I LTR Gypsy -3607 2923 2225 1 719 4063 26 4 0 chrUextra 17635939 17636438 -11368218 - R1_DM LINE R1 -449 4907 4407 1 719 1523 6 0 0 chrUextra 17636458 17636637 -11368019 - R1_DM LINE R1 -1074 4282 4104 1 719 2888 185 9 11 chrUextra 17636737 17637431 -11367225 - SAR_DM Satellite Satellite -569 903 212 1 719 5940 9 0 0 chrUextra 17637535 17638233 -11366423 + R1_DM LINE R1 3855 4552 -804 1 719 5765 20 3 0 chrUextra 17638333 17639031 -11365625 - Gypsy4_I LTR Gypsy -1530 4758 4059 1 719 21 0 0 0 chrUextra 17639131 17639152 -11365504 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 33 43 0 41 chrUextra 17639245 17639318 -11365338 + AT_rich Low_complexity Low_complexity 1 70 0 1 719 423 82 0 0 chrUextra 17639610 17639669 -11364987 - PROTOP_B DNA P 0 1153 1095 1 719 1221 38 44 0 chrUextra 17639669 17639828 -11364828 + PROTOP_B DNA P 1 166 -987 1 719 5861 7 0 1 chrUextra 17639931 17640625 -11364031 + DOC LINE Jockey 4003 4695 -30 1 719 5890 6 1 0 chrUextra 17640725 17641419 -11363237 + STALKER4_I LTR Gypsy 4345 5039 -1491 1 719 3192 161 13 11 chrUextra 17641523 17642219 -11362437 - SAR_DM Satellite Satellite -435 1037 341 1 719 5875 13 0 0 chrUextra 17643116 17643813 -11360843 + ROO_I LTR Pao 5083 5779 -2477 1 719 6060 1 0 0 chrUextra 17643913 17644610 -11360046 - DOC LINE Jockey -652 4073 3377 1 719 5691 23 0 3 chrUextra 17644710 17645407 -11359249 + R1_DM LINE R1 2073 2767 -2589 1 719 2802 0 3 3 chrUextra 17645507 17645832 -11358824 + SSU-rRNA_Dme rRNA rRNA 1671 1995 0 1 719 21 89 0 0 chrUextra 17645851 17645907 -11358749 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 5805 10 1 3 chrUextra 17646304 17647001 -11357655 - R1_DM LINE R1 -845 4511 3816 1 719 5499 13 4 0 chrUextra 17647102 17647798 -11356858 + MAX_I LTR Pao 235 933 -6981 1 719 5988 1 0 0 chrUextra 17647898 17648595 -11356061 + DM176_I LTR Gypsy 3858 4554 -1866 1 719 6100 1 0 0 chrUextra 17648695 17649392 -11355264 + SSU-rRNA_Dme rRNA rRNA 448 1144 -851 1 719 5829 9 0 0 chrUextra 17649492 17650189 -11354467 - QUASIMODO_I LTR Gypsy -2510 3550 2854 1 719 5717 1 1 0 chrUextra 17650289 17650966 -11353690 - LSU-rRNA_Dme rRNA rRNA -3005 895 218 1 719 3319 8 3 0 chrUextra 17651086 17651473 -11353183 - Invader1_LTR LTR Gypsy -35 388 1 1 719 2489 10 3 0 chrUextra 17651473 17651783 -11352873 - Invader1_I LTR Gypsy 0 3186 2876 1 719 2767 168 10 28 chrUextra 17651886 17652564 -11352092 - SAR_DM Satellite Satellite -615 857 192 1 719 705 107 0 0 chrUextra 17652468 17652580 -11352076 + ARS406_DM Unknown Unknown 1 112 -241 1 719 6029 0 1 3 chrUextra 17652680 17653377 -11351279 + SSU-rRNA_Dme rRNA rRNA 1258 1953 -42 1 719 5853 10 1 1 chrUextra 17653477 17654174 -11350482 + R1_DM LINE R1 3607 4303 -1053 1 719 5818 10 0 0 chrUextra 17654274 17654971 -11349685 + MDG1_I LTR Gypsy 3058 3754 -2842 1 719 325 36 70 18 chrUextra 17655073 17655130 -11349526 + HMSBEAGLE_I LTR Gypsy 6 65 -6464 1 719 262 106 0 21 chrUextra 17655152 17655200 -11349456 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 719 1788 213 77 40 chrUextra 17655870 17656561 -11348095 + SAR_DM Satellite Satellite 332 1047 -425 1 719 3223 3 0 60 chrUextra 17656665 17657085 -11347571 - LSU-rRNA_Dme rRNA rRNA -3505 395 1 1 719 21 95 0 0 chrUextra 17657097 17657160 -11347496 + AT_rich Low_complexity Low_complexity 1 63 0 1 719 5703 8 0 0 chrUextra 17657493 17658157 -11346499 - R1_DM LINE R1 -775 4581 3918 1 719 3009 175 9 9 chrUextra 17658280 17658956 -11345700 + SAR_DM Satellite Satellite 326 1001 -471 1 719 2212 107 8 31 chrUextra 17659292 17659682 -11344974 + QUASIMODO_LTR LTR Gypsy 91 607 -51 1 719 469 63 0 0 chrUextra 17659689 17659752 -11344904 + QUASIMODO_I LTR Gypsy 30 92 -5968 1 719 6048 0 3 1 chrUextra 17659853 17660550 -11344106 - LSU-rRNA_Dme rRNA rRNA -57 3843 3146 1 719 4451 2 2 0 chrUextra 17660650 17661161 -11343495 + SSU-rRNA_Dme rRNA rRNA 1484 1995 0 1 719 5156 28 61 19 chrUextra 17661447 17662140 -11342516 - CIRCE LINE Composite -3318 3038 2317 1 719 551 0 0 0 chrUextra 17662244 17662307 -11342349 - SSU-rRNA_Dme rRNA rRNA -1932 63 1 1 719 32 0 0 0 chrUextra 17662439 17662471 -11342185 + AT_rich Low_complexity Low_complexity 1 32 0 1 719 28 48 0 0 chrUextra 17662799 17662841 -11341815 + AT_rich Low_complexity Low_complexity 1 42 0 1 719 5815 21 0 0 chrUextra 17663041 17663738 -11340918 + R1_DM LINE R1 1921 2617 -2739 1 719 1694 273 30 43 chrUextra 17663846 17664535 -11340121 + MAX_I LTR Pao 6562 7241 -673 1 719 6154 0 0 0 chrUextra 17664635 17665332 -11339324 + LSU-rRNA_Dme rRNA rRNA 2888 3584 -316 1 719 2396 106 11 15 chrUextra 17665439 17666109 -11338547 + DMSAT6 Satellite Satellite 1 666 -6 1 719 691 58 29 0 chrUextra 17666230 17666334 -11338322 + ARS406_DM Unknown Unknown 83 189 -164 1 719 2819 174 12 15 chrUextra 17666244 17666904 -11337752 - SAR_DM Satellite Satellite -569 903 246 1 719 369 113 0 0 chrUextra 17666864 17666926 -11337730 + ARS406_DM Unknown Unknown 1 62 -291 1 719 3283 162 10 19 chrUextra 17667027 17667720 -11336936 + SAR_DM Satellite Satellite 369 1055 -417 1 719 2013 0 0 0 chrUextra 17667829 17668051 -11336605 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 1 719 21 95 0 0 chrUextra 17668063 17668126 -11336530 + AT_rich Low_complexity Low_complexity 1 63 0 1 719 34 24 0 0 chrUextra 17668339 17668380 -11336276 + AT_rich Low_complexity Low_complexity 1 41 0 1 719 6181 1 0 0 chrUextra 17668620 17669317 -11335339 - ROO_I LTR Pao -5944 2312 1616 1 719 246 132 0 0 chrUextra 17669495 17669533 -11335123 - PROTOP_B DNA P 0 1153 1116 1 719 475 184 354 0 chrUextra 17669533 17669691 -11334965 - PROTOP_B DNA P 0 1153 940 1 719 37 52 0 0 chrUextra 17669740 17669798 -11334858 + AT_rich Low_complexity Low_complexity 1 58 0 1 719 562 205 0 39 chrUextra 17669948 17670075 -11334581 + STALKER4_I LTR Gypsy 3692 3813 -2717 1 719 234 149 43 0 chrUextra 17670066 17670113 -11334543 + TABOR_I LTR Gypsy 3604 3652 -2684 1 719 3157 181 10 9 chrUextra 17670215 17670911 -11333745 + SAR_DM Satellite Satellite 272 968 -504 1 719 34 24 0 0 chrUextra 17671011 17671052 -11333604 + AT_rich Low_complexity Low_complexity 1 41 0 1 719 22 35 0 0 chrUextra 17671153 17671182 -11333474 + AT_rich Low_complexity Low_complexity 1 29 0 1 719 254 192 41 0 chrUextra 17671379 17671452 -11333204 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 1 719 878 85 7 20 chrUextra 17671808 17672259 -11332397 + RSP Satellite Satellite 1 445 0 1 719 1885 21 4 29 chrUextra 17672263 17672505 -11332151 - G5_DM LINE Jockey 0 4856 4621 1 719 3236 172 17 9 chrUextra 17672606 17673299 -11331357 - SAR_DM Satellite Satellite -428 1044 346 1 719 2081 35 0 4 chrUextra 17673403 17673657 -11330999 - DM1731_LTR LTR Copia -83 253 1 1 719 1927 0 0 22 chrUextra 17673657 17673882 -11330774 - DM1731_I LTR Copia 0 3976 3757 1 719 308 0 0 0 chrUextra 17673894 17673928 -11330728 - DM1731_I LTR Copia -284 3692 3659 1 719 1510 12 0 0 chrUextra 17673926 17674099 -11330557 - DM1731_I LTR Copia -691 3285 3113 1 719 2281 7 4 7 chrUextra 17674199 17674472 -11330184 + IDEFIX_LTR LTR Gypsy 320 591 -3 1 719 551 12 133 5 chrUextra 17674473 17674893 -11329763 + (TA)n Simple_repeat Simple_repeat 1 474 0 1 719 1293 30 6 0 chrUextra 17674996 17675161 -11329495 + STALKER4_I LTR Gypsy 3101 3266 -3264 1 719 2377 4 0 0 chrUextra 17675161 17675437 -11329219 + Copia_LTR LTR Copia 1 276 0 1 719 2283 0 0 0 chrUextra 17675437 17675693 -11328963 + Copia_I LTR Copia 1 256 -4337 1 719 3310 0 0 0 chrUextra 17675793 17676156 -11328500 + NOMAD_LTR LTR Gypsy 156 518 0 1 719 2926 3 3 0 chrUextra 17676156 17676490 -11328166 - ROO_I LTR Pao -3543 4713 4379 1 719 837 0 0 0 chrUextra 17677194 17677287 -11327369 + (TTCTC)n Simple_repeat Simple_repeat 2 94 0 1 719 3238 168 15 12 chrUextra 17677397 17678084 -11326572 - SAR_DM Satellite Satellite -535 937 249 1 719 5767 21 14 0 chrUextra 17678184 17678849 -11325807 - CIRCE LINE Composite -255 6101 5428 1 719 6315 1 1 0 chrUextra 17678981 17679678 -11324978 - DOC LINE Jockey -244 4481 3784 1 719 1929 168 13 7 chrUextra 17679779 17680475 -11324181 + SAR_DM Satellite Satellite 1 699 -677 1 719 3851 79 60 42 chrUextra 17680575 17681272 -11323384 + STALKER4_I LTR Gypsy 5807 6516 -14 1 719 4931 49 119 0 chrUextra 17681372 17682069 -11322587 - TRANSIB2 DNA Transib -1272 1572 793 1 719 6340 6 0 0 chrUextra 17682172 17682866 -11321790 + LINEJ1_DM LINE Jockey 3287 3980 -1040 1 719 953 54 8 30 chrUextra 17682967 17683101 -11321555 + BATUMI_LTR LTR Pao 142 272 0 1 719 37 0 0 0 chrUextra 17683101 17683138 -11321518 + AT_rich Low_complexity Low_complexity 1 37 0 1 719 4096 13 0 0 chrUextra 17683193 17683663 -11320993 - PROTOP_A DNA P 0 1105 636 1 719 6260 0 1 0 chrUextra 17683763 17684460 -11320196 - R1_DM LINE R1 -2193 3163 2466 1 719 3304 176 10 6 chrUextra 17684562 17685254 -11319402 + SAR_DM Satellite Satellite 229 923 -549 1 719 2906 188 17 26 chrUextra 17685361 17686054 -11318602 + SAR_DM Satellite Satellite 1 686 -216 1 719 2816 177 21 29 chrUextra 17686154 17686851 -11317805 + SAR_DM Satellite Satellite 466 1157 -315 1 719 574 137 11 0 chrUextra 17686969 17687064 -11317592 - DMCR1A LINE CR1 -4010 460 365 1 719 592 127 36 0 chrUextra 17687059 17687169 -11317487 - DMCR1A LINE CR1 -4350 120 7 1 719 246 191 0 0 chrUextra 17687236 17687283 -11317373 + DMCR1A LINE CR1 744 790 -3680 1 719 292 189 0 0 chrUextra 17687415 17687468 -11317188 + NOMAD_I LTR Gypsy 6520 6572 0 1 719 5906 23 6 4 chrUextra 17687748 17688445 -11316211 - CIRCE LINE Composite -2740 3616 2919 1 719 925 93 0 0 chrUextra 17689342 17689481 -11315175 - ARS406_DM Unknown Unknown -214 139 1 1 719 3092 176 13 10 chrUextra 17689362 17690039 -11314617 + SAR_DM Satellite Satellite 167 845 -627 1 719 5467 36 17 0 chrUextra 17690139 17690836 -11313820 - IDEFIX_I LTR Gypsy -4597 1031 323 1 719 5774 13 6 3 chrUextra 17690936 17691633 -11313023 + Invader2_I LTR Gypsy 2683 3381 -1211 1 719 21 57 0 0 chrUextra 17691794 17691829 -11312827 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 1143 144 64 5 chrUextra 17691870 17692073 -11312583 - DNAREP1_DM LINE Penelope -358 236 22 1 719 2734 195 40 9 chrUextra 17692530 17693213 -11311443 + SAR_DM Satellite Satellite 415 1118 -354 1 719 334 176 82 0 chrUextra 17693142 17693227 -11311429 - XDMR_DM Unknown Unknown -7 353 262 1 719 2749 189 27 23 chrUextra 17693327 17694024 -11310632 - SAR_DM Satellite Satellite -321 1151 452 1 89 5984 25 0 3 chrUextra 17694124 17694821 -11309835 - R1_DM LINE R1 -2995 2361 1667 1 720 2269 0 4 0 chrUextra 17694921 17695170 -11309486 + SSU-rRNA_Dme rRNA rRNA 1746 1995 0 1 720 1503 29 0 0 chrUextra 17695718 17695889 -11308767 + R1_DM LINE R1 5186 5356 0 1 720 4683 13 0 0 chrUextra 17695887 17696415 -11308241 + LSU-rRNA_Dme rRNA rRNA 2640 3167 -733 1 720 2099 164 10 10 chrUextra 17696515 17696933 -11307723 + SAR_DM Satellite Satellite 630 1047 -425 1 720 1243 182 11 0 chrUextra 17696949 17697212 -11307444 + SAR_DM Satellite Satellite 543 808 -664 1 720 3129 168 32 16 chrUextra 17698115 17698806 -11305850 + SAR_DM Satellite Satellite 332 1033 -439 1 720 1596 92 355 18 chrUextra 17698906 17699392 -11305264 + R1-2_DM LINE R1 48 697 -2519 1 720 1409 110 59 5 chrUextra 17699383 17699603 -11305053 + R1-2_DM LINE R1 814 1045 -2171 1 720 3389 157 12 14 chrUextra 17699710 17700400 -11304256 + SAR_DM Satellite Satellite 332 1019 -453 1 720 5936 29 4 0 chrUextra 17700500 17701197 -11303459 + R1_DM LINE R1 2234 2933 -2423 1 720 471 18 0 0 chrUextra 17701297 17701353 -11303303 + PROTOP_B DNA P 881 936 -217 1 720 293 50 0 0 chrUextra 17701346 17701406 -11303250 + PROTOP_B DNA P 572 631 -522 1 720 2392 58 13 0 chrUextra 17701411 17701724 -11302932 + PROTOP_B DNA P 794 1110 -43 1 720 1052 140 190 0 chrUextra 17701721 17701942 -11302714 - DMCR1A LINE CR1 -1125 3345 3083 1 720 6016 21 4 0 chrUextra 17702094 17702791 -11301865 - R1_DM LINE R1 -2586 2770 2071 1 720 397 121 0 0 chrUextra 17702898 17702956 -11301700 - HETRP_DM Satellite Satellite -286 1586 1529 1 720 669 206 42 7 chrUextra 17703118 17703260 -11301396 - HETRP_DM Satellite Satellite -197 1675 1529 1 720 748 172 14 14 chrUextra 17703418 17703565 -11301091 - HETRP_DM Satellite Satellite -197 1675 1529 1 720 3129 172 13 24 chrUextra 17703688 17704385 -11300271 + SAR_DM Satellite Satellite 418 1106 -366 1 720 6316 6 0 0 chrUextra 17705282 17705979 -11298677 + LSU-rRNA_Dme rRNA rRNA 1878 2574 -1326 1 720 5985 24 1 0 chrUextra 17706079 17706776 -11297880 + R1_DM LINE R1 1483 2180 -3176 1 720 459 205 31 39 chrUextra 17706876 17707003 -11297653 - Gypsy_LTR LTR Gypsy -356 126 1 1 720 3085 157 19 45 chrUextra 17707674 17708369 -11296287 - SAR_DM Satellite Satellite -601 871 195 1 720 1929 71 0 0 chrUextra 17708493 17708759 -11295897 - TAHRE LINE telomeric -12 10451 10186 1 720 756 82 36 0 chrUextra 17708755 17708865 -11295791 - TART LINE telomeric -4140 10337 10224 1 720 1919 81 148 3 chrUextra 17708868 17709165 -11295491 - TART LINE telomeric -6638 7839 7500 1 720 4545 27 88 0 chrUextra 17709267 17709855 -11294801 + IDEFIX_I LTR Gypsy 828 1467 -4161 1 720 901 27 0 0 chrUextra 17709852 17709964 -11294692 + IDEFIX_I LTR Gypsy 2352 2463 -3165 1 720 2848 189 11 16 chrUextra 17710065 17710761 -11293895 + SAR_DM Satellite Satellite 1 692 -308 1 720 3029 45 11 67 chrUextra 17710868 17711301 -11293355 - Baggins1 LINE LOA -4902 551 143 1 720 877 9 0 35 chrUextra 17711661 17711774 -11292882 + NTS_DM Other Other 25 133 -107 1 720 1233 30 0 12 chrUextra 17711774 17711940 -11292716 + NTS_DM Other Other 38 201 -39 1 720 850 56 0 0 chrUextra 17711996 17712104 -11292552 + NTS_DM Other Other 26 133 -107 1 720 1080 79 0 18 chrUextra 17712104 17712271 -11292385 + NTS_DM Other Other 38 201 -39 1 720 5332 40 7 0 chrUextra 17712457 17713152 -11291504 + MDG1_I LTR Gypsy 5541 6240 -356 1 720 5716 33 0 1 chrUextra 17713254 17713949 -11290707 - MDG1_I LTR Gypsy -2692 3904 3211 1 720 272 232 36 12 chrUextra 17714086 17714169 -11290487 + TV1I LTR Gypsy 5903 5962 -1 1 720 3276 181 6 6 chrUextra 17714846 17715540 -11289116 + SAR_DM Satellite Satellite 198 891 -581 1 720 3897 137 15 6 chrUextra 17715643 17716313 -11288343 - TART LINE telomeric -4852 9625 8950 1 720 306 105 0 50 chrUextra 17716488 17716548 -11288108 - Stalker2_I LTR Gypsy -7345 57 1 1 720 345 25 0 0 chrUextra 17716548 17716575 -11288081 - STALKER4_I LTR Gypsy -6503 27 1 1 720 3561 7 0 2 chrUextra 17716575 17716978 -11287678 - STALKER4_LTR LTR Gypsy 0 402 1 1 720 1254 55 6 0 chrUextra 17716978 17717137 -11287519 + FW_DM LINE Jockey 400 559 -4133 1 720 4475 0 4 0 chrUextra 17717239 17717731 -11286925 + SSU-rRNA_Dme rRNA rRNA 1502 1995 0 1 720 21 89 0 0 chrUextra 17717750 17717806 -11286850 + AT_rich Low_complexity Low_complexity 1 56 0 1 720 4307 30 3 149 chrUextra 17718034 17718731 -11285925 + CIRCE LINE Composite 5012 5606 -750 1 720 5911 32 0 0 chrUextra 17718831 17719528 -11285128 + R1_DM LINE R1 2296 2992 -2364 1 720 5877 9 0 0 chrUextra 17719628 17720325 -11284331 + DM297_I LTR Gypsy 1057 1753 -4414 1 720 6288 1 0 0 chrUextra 17720425 17721122 -11283534 + R1_DM LINE R1 1174 1870 -3486 1 720 1059 213 4 4 chrUextra 17721223 17721463 -11283193 - Stalker2_I LTR Gypsy -6872 530 291 1 720 25 0 0 0 chrUextra 17721487 17721512 -11283144 + AT_rich Low_complexity Low_complexity 1 25 0 1 720 2256 69 2 20 chrUextra 17721600 17721919 -11282737 - STALKER4_LTR LTR Gypsy -3 399 94 1 720 5950 36 0 0 chrUextra 17722019 17722714 -11281942 - BATUMI_I LTR Pao -3645 4318 3624 1 720 2918 180 10 11 chrUextra 17722819 17723512 -11281144 - SAR_DM Satellite Satellite -569 903 212 1 720 335 0 0 0 chrUextra 17723615 17723656 -11281000 - PROTOP_B DNA P -590 563 523 1 720 2494 51 9 0 chrUextra 17723671 17724007 -11280649 - PROTOP_B DNA P -743 410 73 1 720 611 161 0 26 chrUextra 17724424 17724539 -11280117 - TAHRE LINE telomeric -9436 1027 916 1 720 2358 178 14 28 chrUextra 17724540 17725105 -11279551 - TAHRE LINE telomeric -9661 802 263 1 720 5886 9 0 0 chrUextra 17725207 17725904 -11278752 + FW_DM LINE Jockey 513 1209 -3483 1 720 498 0 0 0 chrUextra 17726004 17726061 -11278595 - SSU-rRNA_Dme rRNA rRNA -1938 57 1 1 720 32 0 0 0 chrUextra 17726193 17726225 -11278431 + AT_rich Low_complexity Low_complexity 1 32 0 1 720 28 48 0 0 chrUextra 17726553 17726595 -11278061 + AT_rich Low_complexity Low_complexity 1 42 0 1 720 2262 181 76 36 chrUextra 17726801 17727498 -11277158 - SAR_DM Satellite Satellite -265 1207 483 1 720 2906 188 23 23 chrUextra 17727598 17728293 -11276363 - SAR_DM Satellite Satellite -470 695 1 1 720 5533 30 29 0 chrUextra 17728395 17729092 -11275564 - FW_DM LINE Jockey -3972 720 4 1 720 645 56 0 0 chrUextra 17729192 17729282 -11275374 + (CTTAT)n Simple_repeat Simple_repeat 2 91 0 1 720 624 0 0 0 chrUextra 17729989 17730061 -11274595 - MDG1_I LTR Gypsy -5853 743 672 1 720 2144 95 34 11 chrUextra 17730058 17730411 -11274245 - MDG1_I LTR Gypsy -6235 361 1 1 720 1826 98 0 4 chrUextra 17730411 17730686 -11273970 - MDG1_LTR LTR Gypsy -30 412 139 1 720 967 275 32 25 chrUextra 17730788 17731483 -11273173 + STALKER4_I LTR Gypsy 2522 3480 -3050 1 720 5368 35 0 12 chrUextra 17731592 17732280 -11272376 + DMCR1A LINE CR1 1983 2662 -1808 1 720 278 148 33 33 chrUextra 17732380 17732471 -11272185 + XDMR_DM Unknown Unknown 260 350 -10 1 720 3199 266 14 51 chrUextra 17732394 17733859 -11270797 - SAR_DM Satellite Satellite -353 1411 1 1 720 213 39 0 0 chrUextra 17734238 17734264 -11270392 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 720 29 28 0 0 chrUextra 17736229 17736265 -11268391 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 360 204 0 19 chrUextra 17736370 17736475 -11268181 + XDMR_DM Unknown Unknown 258 360 0 1 720 2757 180 7 24 chrUextra 17736389 17737062 -11267594 - SAR_DM Satellite Satellite -354 1118 457 1 720 247 0 0 0 chrUextra 17737828 17737859 -11266797 + PROTOP_B DNA P 1 31 -1122 1 720 6080 3 0 0 chrUextra 17737959 17738656 -11266000 - LSU-rRNA_Dme rRNA rRNA -498 3402 2706 1 720 1554 43 0 3 chrUextra 17738756 17739453 -11265203 + (AATAG)n Simple_repeat Simple_repeat 1 694 0 1 720 586 0 92 0 chrUextra 17740174 17740250 -11264406 + PROTOP_B DNA P 1 83 -1070 1 720 5659 1 3 1 chrUextra 17740350 17741047 -11263609 + QUASIMODO_I LTR Gypsy 4283 4980 -1080 1 720 1836 8 17 13 chrUextra 17741189 17741428 -11263228 + NTS_DM Other Other 1 240 0 1 720 1009 8 0 0 chrUextra 17741428 17741546 -11263110 + NTS_DM Other Other 1 118 -122 1 720 239 54 0 26 chrUextra 17741546 17741584 -11263072 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 720 870 9 0 27 chrUextra 17741641 17741753 -11262903 + NTS_DM Other Other 25 133 -107 1 720 777 0 0 0 chrUextra 17741753 17741844 -11262812 + NTS_DM Other Other 38 128 -112 1 720 3078 77 79 13 chrUextra 17741944 17742641 -11262015 + Gypsy12_I LTR Gypsy 4677 5419 -127 1 720 2386 124 12 5 chrUextra 17742783 17743438 -11261218 + DMSAT6 Satellite Satellite 1 659 0 1 720 2974 170 21 9 chrUextra 17743539 17744214 -11260442 - SAR_DM Satellite Satellite -464 1008 326 1 720 887 19 0 0 chrUextra 17744336 17744442 -11260214 + R1_DM LINE R1 3554 3659 -1697 1 720 4239 32 2 0 chrUextra 17744440 17744963 -11259693 + R1_DM LINE R1 4833 5356 0 1 720 272 28 0 0 chrUextra 17744996 17745032 -11259624 + R1_DM LINE R1 1 36 -5320 1 720 545 301 20 24 chrUextra 17745572 17745827 -11258829 + HMSBEAGLE_I LTR Gypsy 1440 1693 -4836 1 720 5225 25 0 29 chrUextra 17745929 17746626 -11258030 + CIRCE LINE Composite 4175 4851 -1505 1 720 3106 31 0 0 chrUextra 17746726 17747109 -11257547 - MDG1_I LTR Gypsy -1847 4749 4367 1 720 2612 34 0 3 chrUextra 17747095 17747423 -11257233 - MDG1_I LTR Gypsy -2425 4171 3845 1 720 5917 7 1 3 chrUextra 17747523 17748220 -11256436 + SSU-rRNA_Dme rRNA rRNA 656 1351 -644 1 720 1912 21 29 0 chrUextra 17748320 17748563 -11256093 + R1_DM LINE R1 4817 5066 -290 1 720 922 44 0 0 chrUextra 17748560 17748674 -11255982 + R1_DM LINE R1 5243 5356 0 1 720 2141 69 7 7 chrUextra 17748707 17749015 -11255641 + R1_DM LINE R1 1 308 -5048 1 720 1179 0 0 0 chrUextra 17749117 17749248 -11255408 + (CACAA)n Simple_repeat Simple_repeat 3 133 0 1 720 4682 11 0 0 chrUextra 17749250 17749814 -11254842 + DMRT1B LINE R1 638 1201 -3982 1 720 5810 1 4 0 chrUextra 17749914 17750611 -11254045 - ROO_I LTR Pao -4267 3989 3290 1 720 1464 6 0 0 chrUextra 17750711 17750880 -11253776 - LSU-rRNA_Dme rRNA rRNA -1092 2808 2640 1 720 531 0 0 0 chrUextra 17750878 17750939 -11253717 - R1_DM LINE R1 0 5356 5296 1 720 4114 2 0 0 chrUextra 17750936 17751408 -11253248 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2180 1 720 28 48 0 0 chrUextra 17751598 17751640 -11253016 + AT_rich Low_complexity Low_complexity 1 42 0 1 720 32 0 0 0 chrUextra 17751968 17752000 -11252656 + AT_rich Low_complexity Low_complexity 1 32 0 1 720 642 0 0 0 chrUextra 17752132 17752205 -11252451 + SSU-rRNA_Dme rRNA rRNA 1 73 -1922 1 720 2719 171 45 20 chrUextra 17752309 17752961 -11251695 - SAR_DM Satellite Satellite -620 852 185 1 720 702 164 7 0 chrUextra 17752859 17752999 -11251657 + ARS406_DM Unknown Unknown 1 141 -212 1 720 5128 47 36 0 chrUextra 17753102 17753799 -11250857 + TART LINE telomeric 2160 2881 -11596 1 720 319 309 40 40 chrUextra 17753906 17754301 -11250355 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 720 27 29 0 0 chrUextra 17754778 17754812 -11249844 + AT_rich Low_complexity Low_complexity 1 34 0 1 720 752 37 0 115 chrUextra 17755135 17755257 -11249399 + Baggins1 LINE LOA 5346 5453 0 1 720 3170 36 36 0 chrUextra 17755493 17755905 -11248751 + R1_DM LINE R1 4928 5354 -2 1 720 1748 68 12 0 chrUextra 17755940 17756190 -11248466 + R1_DM LINE R1 1 253 -5103 1 720 1559 216 77 44 chrUextra 17756291 17756979 -11247677 + SAR_DM Satellite Satellite 284 994 -478 1 720 5885 0 0 0 chrUextra 17757884 17758581 -11246075 - DM412 LTR Gypsy -1341 5556 4860 1 720 5832 7 3 9 chrUextra 17758681 17759378 -11245278 + Gypsy6_I LTR Gypsy 1868 2560 -4452 1 720 5863 1 1 0 chrUextra 17759478 17760175 -11244481 + DM176_I LTR Gypsy 1907 2604 -3816 1 720 5781 3 0 0 chrUextra 17760279 17760972 -11243684 - ROO_I LTR Pao -4188 4068 3376 1 720 2745 158 9 10 chrUextra 17761072 17761769 -11242887 - SAR_DM Satellite Satellite -1006 695 1 1 720 3288 3 0 0 chrUextra 17761869 17762259 -11242397 + QUASIMODO_I LTR Gypsy 3864 4253 -1807 1 720 2439 16 0 10 chrUextra 17762259 17762566 -11242090 - ROVER-LTR_DM LTR Gypsy 0 367 64 1 720 3068 167 16 16 chrUextra 17762667 17763361 -11241295 + SAR_DM Satellite Satellite 230 923 -549 1 720 5903 0 1 1 chrUextra 17763463 17764160 -11240496 - R1_DM LINE R1 -3692 1664 968 1 720 3666 82 67 34 chrUextra 17764260 17764957 -11239699 + STALKER4_I LTR Gypsy 661 1380 -5150 1 720 1687 5 18 18 chrUextra 17765057 17765283 -11239373 + NTS_DM Other Other 15 240 0 1 720 1741 17 17 17 chrUextra 17765283 17765523 -11239133 + NTS_DM Other Other 1 240 0 1 720 1596 35 17 17 chrUextra 17765523 17765754 -11238902 + NTS_DM Other Other 1 231 -9 1 720 5608 30 0 6 chrUextra 17765854 17766551 -11238105 - BATUMI_I LTR Pao -2406 5557 4865 1 720 5977 1 0 0 chrUextra 17766651 17767348 -11237308 + R1_DM LINE R1 2449 3145 -2211 1 720 1391 0 0 0 chrUextra 17768245 17768413 -11236243 - ROVER-LTR_DM LTR Gypsy -198 169 2 1 720 180 0 0 0 chrUextra 17768413 17768433 -11236223 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 720 3360 5 7 7 chrUextra 17768433 17768846 -11235810 + DM297_LTR LTR Gypsy 2 414 0 1 720 784 21 0 0 chrUextra 17768846 17768942 -11235714 + DM297_I LTR Gypsy 1 96 -6071 1 720 5840 1 3 0 chrUextra 17769042 17769739 -11234917 + DOC LINE Jockey 616 1314 -3411 1 720 2922 187 10 7 chrUextra 17769843 17770533 -11234123 + SAR_DM Satellite Satellite 267 958 -514 1 720 5799 9 1 3 chrUextra 17770636 17771333 -11233323 + R1_DM LINE R1 3555 4250 -1106 1 720 5842 3 1 1 chrUextra 17771437 17772130 -11232526 - R1_DM LINE R1 -3757 1599 907 1 720 5968 6 0 0 chrUextra 17772230 17772927 -11231729 + R1_DM LINE R1 1755 2451 -2905 1 720 5870 9 0 0 chrUextra 17773027 17773724 -11230932 - STALKER4_I LTR Gypsy -4006 2524 1828 1 720 4498 37 73 0 chrUextra 17773832 17774459 -11230197 + PROTOP DNA P 48 720 -3760 1 720 5829 1 0 0 chrUextra 17774621 17775318 -11229338 - DM176_I LTR Gypsy -4963 1457 761 1 720 1654 18 17 17 chrUextra 17775418 17775648 -11229008 + NTS_DM Other Other 11 240 0 1 720 1825 8 17 13 chrUextra 17775648 17775887 -11228769 + NTS_DM Other Other 1 240 0 1 720 1656 18 13 18 chrUextra 17775887 17776112 -11228544 + NTS_DM Other Other 1 224 -16 1 720 3123 159 17 16 chrUextra 17776215 17776910 -11227746 - SAR_DM Satellite Satellite -484 988 293 1 720 2538 107 7 26 chrUextra 17777012 17777708 -11226948 - DMSAT6 Satellite Satellite -222 682 1 1 720 879 90 6 18 chrUextra 17777809 17778506 -11226150 - RSP Satellite Satellite -56 688 1 1 720 5713 10 19 0 chrUextra 17778606 17779302 -11225354 - Invader2_I LTR Gypsy -3522 1070 362 1 720 2728 194 25 6 chrUextra 17779424 17780099 -11224557 + SAR_DM Satellite Satellite 326 1013 -459 1 720 3070 199 6 4 chrUextra 17780200 17780878 -11223778 - Stalker2_I LTR Gypsy -2925 4477 3799 1 720 6044 1 0 0 chrUextra 17780997 17781694 -11222962 + FW_DM LINE Jockey 689 1385 -3307 1 720 870 9 0 27 chrUextra 17781810 17781922 -11222734 + NTS_DM Other Other 25 133 -107 1 720 1252 18 0 6 chrUextra 17781922 17782087 -11222569 + NTS_DM Other Other 38 201 -39 1 720 843 18 0 27 chrUextra 17782139 17782251 -11222405 + NTS_DM Other Other 25 133 -107 1 720 1252 18 0 6 chrUextra 17782251 17782416 -11222240 + NTS_DM Other Other 38 201 -39 1 720 5876 1 0 13 chrUextra 17782591 17783288 -11221368 - DOC LINE Jockey -3876 849 162 1 720 3684 16 11 0 chrUextra 17783388 17783834 -11220822 - LSU-rRNA_Dme rRNA rRNA -810 3090 2640 1 720 2081 28 0 0 chrUextra 17783832 17784084 -11220572 - R1_DM LINE R1 0 5356 5105 1 720 2429 82 10 30 chrUextra 17784185 17784881 -11219775 + DMSAT6 Satellite Satellite 1 681 -40 1 720 836 121 16 20 chrUextra 17784985 17785679 -11218977 + RSP Satellite Satellite 1 690 0 1 720 551 176 81 51 chrUextra 17786235 17786432 -11218224 + DMCR1A LINE CR1 4227 4429 -41 1 720 242 56 0 0 chrUextra 17786439 17786475 -11218181 - Gypsy12_LTR LTR Gypsy -1400 936 901 1 720 792 233 19 103 chrUextra 17787372 17787750 -11216906 + XDMR_DM Unknown Unknown 6 351 -9 1 720 2547 174 7 4 chrUextra 17787516 17788068 -11216588 - SAR_DM Satellite Satellite -545 927 374 1 720 2789 192 10 7 chrUextra 17788168 17788845 -11215811 - SAR_DM Satellite Satellite -599 873 195 1 720 550 144 9 18 chrUextra 17788751 17788864 -11215792 + ARS406_DM Unknown Unknown 1 112 -241 1 720 1789 315 6 6 chrUextra 17788968 17789660 -11214996 - GTWIN_I LTR Gypsy -3010 3411 2720 1 720 284 294 20 20 chrUextra 17790846 17790995 -11213661 + Invader3_I LTR Gypsy 3263 3421 -1467 1 720 5578 24 42 0 chrUextra 17791352 17792048 -11212608 - NINJA_I LTR Pao -2559 3452 2728 1 720 26 50 0 0 chrUextra 17792194 17792234 -11212422 + AT_rich Low_complexity Low_complexity 1 40 0 1 720 3443 35 0 2 chrUextra 17792269 17792698 -11211958 + ROO_LTR LTR Pao 1 428 0 1 720 601 83 18 44 chrUextra 17792731 17792844 -11211812 + ROO_I LTR Pao 114 223 -8033 1 720 3995 28 0 6 chrUextra 17792945 17793445 -11211211 - G2_DM LINE Jockey -1195 1907 1411 1 720 25 65 0 0 chrUextra 17793594 17793640 -11211016 + AT_rich Low_complexity Low_complexity 1 46 0 1 720 5698 24 0 0 chrUextra 17793740 17794436 -11210220 + R1_DM LINE R1 2185 2880 -2476 1 720 246 150 0 0 chrUextra 17794555 17794595 -11210061 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 246 150 0 0 chrUextra 17794647 17794687 -11209969 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 255 125 0 0 chrUextra 17794730 17794770 -11209886 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 22 56 0 0 chrUextra 17794783 17794819 -11209837 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 870 9 0 27 chrUextra 17794845 17794957 -11209699 + NTS_DM Other Other 25 133 -107 1 720 1222 18 0 12 chrUextra 17794957 17795123 -11209533 + NTS_DM Other Other 38 201 -39 1 720 435 0 0 53 chrUextra 17795175 17795232 -11209424 + NTS_DM Other Other 25 78 -162 1 720 6018 3 0 0 chrUextra 17795332 17796028 -11208628 + FW_DM LINE Jockey 3493 4188 -504 1 720 2065 20 0 4 chrUextra 17796128 17796383 -11208273 + MDG1_LTR LTR Gypsy 189 442 0 1 720 1370 172 28 23 chrUextra 17796403 17796823 -11207833 - Gypsy10_I LTR Gypsy -2561 2717 1952 1 720 1003 0 8 0 chrUextra 17796924 17797041 -11207615 + LSU-rRNA_Dme rRNA rRNA 3783 3900 0 1 720 27 29 0 0 chrUextra 17797113 17797147 -11207509 + AT_rich Low_complexity Low_complexity 1 34 0 1 720 246 150 0 0 chrUextra 17797152 17797192 -11207464 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 246 150 0 0 chrUextra 17797244 17797284 -11207372 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 246 150 0 0 chrUextra 17797336 17797376 -11207280 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 255 125 0 0 chrUextra 17797419 17797459 -11207197 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 22 56 0 0 chrUextra 17797472 17797508 -11207148 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 643 24 0 35 chrUextra 17797534 17797620 -11207036 + NTS_DM Other Other 25 107 -133 1 720 27 62 0 0 chrUextra 17797799 17797847 -11206809 + AT_rich Low_complexity Low_complexity 1 48 0 1 720 371 181 75 19 chrUextra 17797892 17797999 -11206657 + Copia_I LTR Copia 4401 4513 -80 1 720 4452 129 0 0 chrUextra 17798516 17799212 -11205444 - HMSBEAGLE_I LTR Gypsy -738 5791 5096 1 720 295 109 0 0 chrUextra 17799336 17799382 -11205274 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 1 720 1176 184 55 69 chrUextra 17799645 17800006 -11204650 - HMSBEAGLE_I LTR Gypsy -161 6368 6013 1 720 4863 0 0 42 chrUextra 17800188 17800804 -11203852 + LSU-rRNA_Dme rRNA rRNA 1 590 -3310 1 720 5210 29 3 10 chrUextra 17800904 17801578 -11203078 + BATUMI_I LTR Pao 2906 3574 -4389 1 720 4961 51 20 14 chrUextra 17801700 17802396 -11202260 + R1_DM LINE R1 165 864 -4492 1 720 34 24 0 0 chrUextra 17802889 17802930 -11201726 + AT_rich Low_complexity Low_complexity 1 41 0 1 720 5583 33 0 0 chrUextra 17803292 17803988 -11200668 + R1_DM LINE R1 2454 3149 -2207 1 720 5803 20 0 0 chrUextra 17804088 17804784 -11199872 - R1_DM LINE R1 -2776 2580 1885 1 720 5863 0 0 1 chrUextra 17804884 17805580 -11199076 + LSU-rRNA_Dme rRNA rRNA 230 924 -2976 1 720 6016 1 0 3 chrUextra 17805680 17806376 -11198280 - LSU-rRNA_Dme rRNA rRNA -732 3168 2475 1 720 3104 174 12 7 chrUextra 17806477 17807166 -11197490 + SAR_DM Satellite Satellite 246 937 -535 1 720 205 111 60 60 chrUextra 17807278 17807345 -11197311 + A-rich Low_complexity Low_complexity 3 69 0 1 720 1662 291 0 0 chrUextra 17807419 17807968 -11196688 + ROVER-I_DM LTR Gypsy 890 1438 -5146 1 720 2083 12 0 0 chrUextra 17808068 17808311 -11196345 + PROTOP_A DNA P 863 1105 0 1 720 1029 81 0 0 chrUextra 17808311 17808451 -11196205 - TART LINE telomeric -13756 721 582 1 720 1246 146 80 86 chrUextra 17808450 17808764 -11195892 + TART LINE telomeric 6042 6353 -8124 1 720 3160 173 7 6 chrUextra 17808864 17809560 -11195096 - SAR_DM Satellite Satellite -399 1073 377 1 720 5860 0 0 0 chrUextra 17809668 17810356 -11194300 + LSU-rRNA_Dme rRNA rRNA 218 905 -2995 1 720 1359 191 29 59 chrUextra 17810561 17811005 -11193651 + Gypsy_LTR LTR Gypsy 1 431 -51 1 720 5717 16 1 1 chrUextra 17811252 17811948 -11192708 + R1_DM LINE R1 3638 4333 -1023 1 720 5458 9 68 0 chrUextra 17812048 17812744 -11191912 + STALKER4_I LTR Gypsy 2989 3731 -2799 1 720 1222 18 0 12 chrUextra 17812882 17813048 -11191608 - NTS_DM Other Other -39 201 38 1 720 870 9 0 27 chrUextra 17813048 17813160 -11191496 - NTS_DM Other Other -107 133 25 1 720 22 56 0 0 chrUextra 17813186 17813222 -11191434 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 255 125 0 0 chrUextra 17813235 17813275 -11191381 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 246 150 0 0 chrUextra 17813318 17813358 -11191298 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 246 150 0 0 chrUextra 17813401 17813441 -11191215 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 246 150 0 0 chrUextra 17813493 17813533 -11191123 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 5700 19 7 0 chrUextra 17813640 17814336 -11190320 + ACCORD2_I LTR Gypsy 4293 4993 -2219 1 720 6123 1 0 0 chrUextra 17815232 17815928 -11188728 - LINEJ1_DM LINE Jockey -629 4391 3696 1 720 297 0 0 0 chrUextra 17816028 17816061 -11188595 + (GAGAA)n Simple_repeat Simple_repeat 2 34 0 1 720 1033 68 74 6 chrUextra 17816824 17816987 -11187669 - DMCR1A LINE CR1 -4027 443 270 1 720 41 0 0 0 chrUextra 17817479 17817520 -11187136 + AT_rich Low_complexity Low_complexity 1 41 0 1 720 2366 0 4 4 chrUextra 17817620 17817896 -11186760 + SSU-rRNA_Dme rRNA rRNA 1720 1995 0 1 720 21 89 0 0 chrUextra 17817915 17817971 -11186685 + AT_rich Low_complexity Low_complexity 1 56 0 1 720 635 307 42 35 chrUextra 17818679 17819100 -11185556 - GTWIN_I LTR Gypsy -2883 3538 2969 1 720 1732 112 76 63 chrUextra 17819235 17819908 -11184748 + TAHRE LINE telomeric 10186 10663 -3814 1 720 5762 19 0 1 chrUextra 17820008 17820704 -11183952 - IDEFIX_I LTR Gypsy -3285 2343 1649 1 720 5621 24 6 0 chrUextra 17820804 17821500 -11183156 - R1_DM LINE R1 -2316 3040 2341 1 720 5975 0 0 0 chrUextra 17821600 17822296 -11182360 + DMRT1B LINE R1 2527 3222 -1961 1 720 1878 13 0 0 chrUextra 17822400 17822626 -11182030 + NINJA_I LTR Pao 5786 6011 0 1 720 2431 32 0 28 chrUextra 17822626 17822949 -11181707 + NINJA_LTR LTR Pao 1 314 -3 1 720 5852 20 0 0 chrUextra 17823192 17823888 -11180768 - Gypsy4_I LTR Gypsy -2106 4182 3487 1 720 28 48 0 0 chrUextra 17824143 17824185 -11180471 + AT_rich Low_complexity Low_complexity 1 42 0 1 720 32 0 0 0 chrUextra 17824513 17824545 -11180111 + AT_rich Low_complexity Low_complexity 1 32 0 1 720 5524 32 9 1 chrUextra 17824784 17825477 -11179179 + R1_DM LINE R1 2828 3525 -1831 1 11 4077 112 109 0 chrUextra 17825581 17826276 -11178380 + TART_B1 LINE telomeric 5547 6317 -4337 1 721 1222 18 0 12 chrUextra 17826424 17826590 -11178066 - NTS_DM Other Other -39 201 38 1 721 870 9 0 27 chrUextra 17826590 17826702 -11177954 - NTS_DM Other Other -107 133 25 1 721 22 56 0 0 chrUextra 17826728 17826764 -11177892 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 255 125 0 0 chrUextra 17826777 17826817 -11177839 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 246 150 0 0 chrUextra 17826953 17826993 -11177663 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 2458 24 0 0 chrUextra 17827968 17828259 -11176397 + MAX_I LTR Pao 3367 3657 -4257 1 721 3422 7 0 0 chrUextra 17828257 17828664 -11175992 - DM176_I LTR Gypsy -2587 3833 3427 1 721 5663 3 20 0 chrUextra 17828764 17829460 -11175196 + MDG1_I LTR Gypsy 985 1694 -4902 1 721 5937 1 1 1 chrUextra 17829561 17830256 -11174400 - LSU-rRNA_Dme rRNA rRNA -2587 1313 619 1 721 2993 170 10 12 chrUextra 17830356 17831034 -11173622 + SAR_DM Satellite Satellite 400 1076 -396 1 721 28 48 0 0 chrUextra 17831197 17831239 -11173417 + AT_rich Low_complexity Low_complexity 1 42 0 1 721 406 0 37 0 chrUextra 17831458 17831512 -11173144 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 721 2052 8 0 0 chrUextra 17831609 17831848 -11172808 + SSU-rRNA_Dme rRNA rRNA 1 239 -1756 1 721 5843 3 1 6 chrUextra 17831950 17832644 -11172012 - LSU-rRNA_Dme rRNA rRNA -2442 1458 768 1 721 3247 171 16 9 chrUextra 17832749 17833423 -11171233 - SAR_DM Satellite Satellite -425 1047 369 1 721 5854 22 0 0 chrUextra 17833540 17834236 -11170420 - STALKER4_I LTR Gypsy -2606 3924 3229 1 721 6178 3 0 0 chrUextra 17834336 17835032 -11169624 + ROO_I LTR Pao 5591 6286 -1970 1 721 1802 166 19 9 chrUextra 17835135 17835828 -11168828 - SAR_DM Satellite Satellite -549 700 1 1 721 259 125 0 0 chrUextra 17836531 17836571 -11168085 - HMSBEAGLE_I LTR Gypsy -6315 214 175 1 721 356 265 114 96 chrUextra 17837073 17837353 -11167303 - Invader1_LTR LTR Gypsy -55 368 84 1 721 3010 175 8 8 chrUextra 17837523 17838145 -11166511 + SAR_DM Satellite Satellite 293 914 -558 1 721 593 27 0 0 chrUextra 17838142 17838216 -11166440 - ARS406_DM Unknown Unknown -195 158 85 1 721 613 323 0 0 chrUextra 17838728 17838941 -11165715 - MICROPIA_I LTR Gypsy -622 3854 3662 1 721 688 176 115 33 chrUextra 17839118 17839300 -11165356 - TIRANT_LTR LTR Gypsy -220 197 1 1 721 1026 25 16 0 chrUextra 17839605 17839727 -11164929 - Baggins1 LINE LOA -15 5438 5315 1 721 633 62 0 0 chrUextra 17839723 17839804 -11164852 - Baggins1 LINE LOA -456 4997 4917 1 721 5295 42 19 4 chrUextra 17839908 17840604 -11164052 - MDG1_I LTR Gypsy -1152 5444 4739 1 721 6256 1 1 3 chrUextra 17840704 17841400 -11163256 - SSU-rRNA_Dme rRNA rRNA -389 1606 912 1 721 950 80 8 21 chrUextra 17841500 17842196 -11162460 - RSP Satellite Satellite -79 687 1 1 721 2383 177 13 6 chrUextra 17842299 17842992 -11161664 + SAR_DM Satellite Satellite 1 697 -677 1 721 6337 1 0 1 chrUextra 17843092 17843788 -11160868 + LSU-rRNA_Dme rRNA rRNA 2799 3493 -407 1 721 6173 1 0 0 chrUextra 17843888 17844584 -11160072 - ROO_I LTR Pao -5115 3141 2446 1 721 6057 22 0 0 chrUextra 17844684 17845380 -11159276 + R1_DM LINE R1 1788 2483 -2873 1 721 1250 299 27 20 chrUextra 17845625 17846174 -11158482 + Copia_I LTR Copia 156 708 -3885 1 721 2524 0 4 0 chrUextra 17846276 17846553 -11158103 - ROO_LTR LTR Pao -150 278 1 1 721 3303 22 0 2 chrUextra 17846553 17846972 -11157684 - ROO_I LTR Pao 0 8256 7839 1 721 674 47 0 0 chrUextra 17847072 17847157 -11157499 + DOC5_DM LINE Jockey 1099 1183 -3499 1 721 1356 44 205 0 chrUextra 17847160 17847365 -11157291 + DOC5_DM LINE Jockey 1303 1549 -3133 1 721 2776 58 10 13 chrUextra 17847371 17847754 -11156902 - DM297_I LTR Gypsy -798 5369 4988 1 721 2936 3 6 3 chrUextra 17847868 17848205 -11156451 + LSU-rRNA_Dme rRNA rRNA 1451 1788 -2112 1 721 2906 0 0 0 chrUextra 17848249 17848564 -11156092 + LSU-rRNA_Dme rRNA rRNA 1788 2102 -1798 1 721 6201 9 0 0 chrUextra 17848664 17849360 -11155296 + R1_DM LINE R1 2471 3166 -2190 1 721 6015 7 1 0 chrUextra 17849460 17850156 -11154500 + QUASIMODO_I LTR Gypsy 1535 2231 -3829 1 721 4090 4 0 0 chrUextra 17850256 17850707 -11153949 + LSU-rRNA_Dme rRNA rRNA 2206 2656 -1244 1 721 2225 4 0 0 chrUextra 17850704 17850952 -11153704 + R1_DM LINE R1 3231 3478 -1878 1 721 6095 0 0 3 chrUextra 17851052 17851748 -11152908 - ROO_I LTR Pao -1756 6500 5807 1 721 573 62 38 0 chrUextra 17851848 17851928 -11152728 - DMCR1A LINE CR1 -29 4441 4359 1 721 790 116 0 0 chrUextra 17851900 17852012 -11152644 - BATUMI_I LTR Pao -2460 5503 5392 1 721 4339 32 35 6 chrUextra 17852008 17852544 -11152112 - BATUMI_I LTR Pao -2850 5113 4562 1 721 5986 17 1 3 chrUextra 17852644 17853340 -11151316 - DM1731_I LTR Copia -2898 1078 384 1 721 3053 181 27 6 chrUextra 17853459 17854128 -11150528 - SAR_DM Satellite Satellite -441 1031 349 1 721 6236 1 1 0 chrUextra 17854236 17854932 -11149724 - R1_DM LINE R1 -2276 3080 2384 1 721 463 13 39 0 chrUextra 17855828 17855905 -11148751 + G2_DM LINE Jockey 3020 3099 -3 1 721 4941 2 0 0 chrUextra 17855986 17856524 -11148132 + SSU-rRNA_Dme rRNA rRNA 1 538 -1457 1 721 266 192 0 19 chrUextra 17856625 17856678 -11147978 + LSU-rRNA_Dme rRNA rRNA 2569 2620 -1280 1 721 269 125 0 0 chrUextra 17856721 17856761 -11147895 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 22 56 0 0 chrUextra 17856774 17856810 -11147846 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 907 9 0 27 chrUextra 17856836 17856948 -11147708 + NTS_DM Other Other 25 133 -107 1 721 1304 18 0 6 chrUextra 17856948 17857113 -11147543 + NTS_DM Other Other 38 201 -39 1 721 907 9 0 27 chrUextra 17857165 17857277 -11147379 + NTS_DM Other Other 25 133 -107 1 721 369 23 0 0 chrUextra 17857277 17857320 -11147336 + NTS_DM Other Other 38 80 -160 1 721 1304 18 0 6 chrUextra 17857437 17857602 -11147054 + NTS_DM Other Other 38 201 -39 1 721 907 9 0 27 chrUextra 17857654 17857766 -11146890 + NTS_DM Other Other 25 133 -107 1 721 1304 18 0 6 chrUextra 17857766 17857931 -11146725 + NTS_DM Other Other 38 201 -39 1 721 21 57 0 0 chrUextra 17857931 17857966 -11146690 + AT_rich Low_complexity Low_complexity 1 35 0 1 721 870 9 9 27 chrUextra 17857992 17858103 -11146553 + NTS_DM Other Other 25 133 -107 1 721 300 186 81 25 chrUextra 17858574 17858734 -11145922 + (TATATG)n Simple_repeat Simple_repeat 6 174 0 1 721 25 119 0 0 chrUextra 17858734 17858885 -11145771 + AT_rich Low_complexity Low_complexity 1 151 0 1 721 933 82 8 21 chrUextra 17859012 17859708 -11144948 + RSP Satellite Satellite 1 687 0 1 721 1984 194 32 68 chrUextra 17859875 17860504 -11144152 + TAHRE LINE telomeric 6945 7550 -2913 1 721 4469 75 8 4 chrUextra 17860604 17861300 -11143356 + G2_DM LINE Jockey 4 514 -2588 1 721 5717 25 14 1 chrUextra 17861400 17862094 -11142562 + STALKER4_I LTR Gypsy 2051 2753 -3777 1 721 6124 0 0 1 chrUextra 17862196 17862892 -11141764 - LSU-rRNA_Dme rRNA rRNA -2853 1047 353 1 721 563 15 0 42 chrUextra 17862992 17863063 -11141593 - NTS_DM Other Other -148 92 25 1 721 1304 18 0 6 chrUextra 17863115 17863280 -11141376 - NTS_DM Other Other -39 201 38 1 721 877 9 0 35 chrUextra 17863280 17863393 -11141263 - NTS_DM Other Other -107 133 25 1 721 1287 24 0 6 chrUextra 17863445 17863610 -11141046 - NTS_DM Other Other -39 201 38 1 721 630 13 0 0 chrUextra 17863610 17863688 -11140968 - NTS_DM Other Other -107 133 56 1 721 1562 121 57 3 chrUextra 17864177 17864459 -11140197 + DNAREP1_DM LINE Penelope 1 297 -297 1 721 6252 4 0 0 chrUextra 17864584 17865280 -11139376 - Invader3_I LTR Gypsy -880 4008 3313 1 721 5713 48 1 1 chrUextra 17865380 17866076 -11138580 - R1_DM LINE R1 -3621 1735 1040 1 721 5052 32 0 71 chrUextra 17866176 17866853 -11137803 + R1_DM LINE R1 1333 1961 -3395 1 721 3260 265 38 30 chrUextra 17866974 17868464 -11136192 + SAR_DM Satellite Satellite 1 1501 -354 1 721 4090 42 8 13 chrUextra 17868584 17869118 -11135538 + BATUMI_I LTR Pao 6471 7001 -962 1 721 1751 238 25 36 chrUextra 17868587 17869260 -11135396 - MAX_I LTR Pao -703 7211 6305 1 721 6056 19 4 0 chrUextra 17869360 17870056 -11134600 + Copia2_I LTR Copia 2039 2737 -1425 1 721 34 24 0 0 chrUextra 17870547 17870588 -11134068 + AT_rich Low_complexity Low_complexity 1 41 0 1 721 794 0 0 0 chrUextra 17870952 17871041 -11133615 - NTS_DM Other Other -114 126 38 1 721 907 9 0 27 chrUextra 17871041 17871153 -11133503 - NTS_DM Other Other -107 133 25 1 721 22 56 0 0 chrUextra 17871179 17871215 -11133441 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 269 125 0 0 chrUextra 17871228 17871268 -11133388 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 262 150 0 0 chrUextra 17871311 17871351 -11133305 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 236 175 0 0 chrUextra 17871403 17871443 -11133213 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 236 175 0 0 chrUextra 17871495 17871535 -11133121 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 22 56 0 0 chrUextra 17871540 17871576 -11133080 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 6094 7 4 4 chrUextra 17871748 17872444 -11132212 - DIVER2_I LTR Pao -3219 928 233 1 721 798 62 149 88 chrUextra 17872544 17872750 -11131906 + FB4_DM DNA Tc1 3847 4053 -36 1 721 38 61 0 0 chrUextra 17873129 17873195 -11131461 + AT_rich Low_complexity Low_complexity 1 66 0 1 721 3599 197 1 0 chrUextra 17873340 17874034 -11130622 - ROVER-I_DM LTR Gypsy -2744 3840 3146 1 721 26 30 0 0 chrUextra 17874433 17874466 -11130190 + AT_rich Low_complexity Low_complexity 1 33 0 1 721 23 68 0 0 chrUextra 17874512 17874556 -11130100 + AT_rich Low_complexity Low_complexity 1 44 0 1 721 4964 11 2 2 chrUextra 17874932 17875505 -11129151 + R1_DM LINE R1 3514 4086 -1270 1 721 1077 24 0 0 chrUextra 17875503 17875628 -11129028 + R1_DM LINE R1 4559 4683 -673 1 721 5411 0 2 2 chrUextra 17875728 17876323 -11128333 + SSU-rRNA_Dme rRNA rRNA 1401 1995 0 1 721 291 50 25 0 chrUextra 17876524 17876564 -11128092 + ARS406_DM Unknown Unknown 149 189 -164 1 721 3152 166 11 8 chrUextra 17876532 17877183 -11127473 - SAR_DM Satellite Satellite -625 847 195 1 721 847 100 0 0 chrUextra 17877090 17877220 -11127436 + ARS406_DM Unknown Unknown 1 130 -223 1 721 3050 187 9 14 chrUextra 17877320 17878016 -11126640 + SAR_DM Satellite Satellite 224 915 -557 1 721 1728 0 5 0 chrUextra 17878117 17878308 -11126348 - LSU-rRNA_Dme rRNA rRNA -1921 1979 1788 1 721 3952 2 4 9 chrUextra 17878352 17878812 -11125844 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1331 1 721 697 286 42 82 chrUextra 17878914 17879461 -11125195 - Gypsy12_LTR LTR Gypsy -1294 1042 409 1 721 1485 40 1 9 chrUextra 17879708 17880404 -11124252 + (AATAG)n Simple_repeat Simple_repeat 1 690 0 1 721 819 0 0 0 chrUextra 17881109 17881200 -11123456 + (CACAA)n Simple_repeat Simple_repeat 5 95 0 1 721 2863 174 29 29 chrUextra 17881303 17881994 -11122662 - SAR_DM Satellite Satellite -357 1115 425 1 721 562 205 0 39 chrUextra 17882219 17882346 -11122310 + STALKER4_I LTR Gypsy 3692 3813 -2717 1 721 234 149 43 0 chrUextra 17882337 17882384 -11122272 + TABOR_I LTR Gypsy 3604 3652 -2684 1 721 966 160 32 0 chrUextra 17882404 17882591 -11122065 + I_DM LINE I 2127 2319 -3912 1 721 1434 74 69 0 chrUextra 17882590 17882792 -11121864 - DNAREP1_DM LINE Penelope -7 587 372 1 721 5929 19 19 0 chrUextra 17882892 17883588 -11121068 + ACCORD2_I LTR Gypsy 271 979 -6233 1 721 2551 77 270 21 chrUextra 17883688 17884249 -11120407 + MDG1_I LTR Gypsy 5908 6799 -98 1 721 357 86 0 0 chrUextra 17884253 17884311 -11120345 + (TAA)n Simple_repeat Simple_repeat 3 60 0 1 721 299 143 314 0 chrUextra 17884313 17884383 -11120273 + MDG1_LTR LTR Gypsy 89 180 -262 1 721 335 317 5 37 chrUextra 17884530 17884720 -11119936 + TABOR_I LTR Gypsy 1356 1539 -4797 1 721 5438 29 1 1 chrUextra 17885280 17885975 -11118681 + ACCORD2_I LTR Gypsy 6386 7080 -132 1 721 212 54 0 51 chrUextra 17887258 17887297 -11117359 + (TTTTTA)n Simple_repeat Simple_repeat 2 38 0 1 721 5235 26 91 0 chrUextra 17887668 17888364 -11116292 - R1_DM LINE R1 -370 4986 4228 1 721 1466 0 25 15 chrUextra 17888464 17888662 -11115994 + NTS_DM Other Other 41 240 0 1 721 1861 0 17 13 chrUextra 17888662 17888901 -11115755 + NTS_DM Other Other 1 240 0 1 721 1825 8 17 13 chrUextra 17888901 17889140 -11115516 + NTS_DM Other Other 1 240 0 1 721 2635 126 128 8 chrUextra 17889260 17889956 -11114700 - TART_B1 LINE telomeric -9317 1337 804 1 721 4005 16 0 2 chrUextra 17890056 17890571 -11114085 + ROO_I LTR Pao 7743 8256 0 1 721 1565 0 0 0 chrUextra 17890571 17890752 -11113904 + ROO_LTR LTR Pao 1 181 -247 1 721 3811 76 64 28 chrUextra 17890852 17891544 -11113112 - STALKER4_I LTR Gypsy -5133 1397 681 1 721 4076 61 64 22 chrUextra 17891656 17892326 -11112330 + PROTOP DNA P 48 745 -3735 1 721 4297 2 2 0 chrUextra 17892444 17892941 -11111715 + QUASIMODO_LTR LTR Gypsy 161 658 0 1 721 1567 25 10 0 chrUextra 17892941 17893139 -11111517 + QUASIMODO_I LTR Gypsy 1 200 -5860 1 721 5279 51 1 10 chrUextra 17893240 17893936 -11110720 + R1_DM LINE R1 1039 1728 -3628 1 721 2259 103 13 41 chrUextra 17894037 17894503 -11110153 - DMSAT6 Satellite Satellite -13 457 5 1 721 1091 111 20 0 chrUextra 17894533 17894732 -11109924 - DMSAT6 Satellite Satellite -37 433 231 1 721 3198 158 12 9 chrUextra 17894840 17895528 -11109128 - SAR_DM Satellite Satellite -396 1076 387 1 721 5678 19 6 3 chrUextra 17895628 17896324 -11108332 - R1_DM LINE R1 -1472 3884 3187 1 721 1486 321 2 2 chrUextra 17896483 17897120 -11107536 - Invader6_I LTR Gypsy -1910 2189 1553 1 721 5363 8 17 1 chrUextra 17897260 17897916 -11106740 + G_DM LINE Jockey 1 666 -3680 1 721 5030 52 33 0 chrUextra 17898016 17898712 -11105944 + TART LINE telomeric 2083 2801 -11676 1 721 5967 3 0 0 chrUextra 17898812 17899508 -11105148 - R1_DM LINE R1 -3107 2249 1554 1 721 5516 40 0 0 chrUextra 17899608 17900304 -11104352 - DIVER_I LTR Pao -1549 4094 3399 1 721 1370 147 19 4 chrUextra 17900404 17900664 -11103992 + MICROPIA_I LTR Gypsy 4213 4476 0 1 721 601 97 23 171 chrUextra 17900685 17900860 -11103796 + MICROPIA_LTR LTR Gypsy 156 304 -172 1 721 844 223 36 5 chrUextra 17900863 17901084 -11103572 + MICROPIA_LTR LTR Gypsy 248 475 -1 1 721 726 88 0 0 chrUextra 17901200 17901314 -11103342 - ARS406_DM Unknown Unknown -227 126 13 1 721 2692 187 26 8 chrUextra 17901233 17901896 -11102760 + SAR_DM Satellite Satellite 195 869 -603 1 721 377 189 9 19 chrUextra 17901996 17902104 -11102552 + XDMR_DM Unknown Unknown 254 360 0 1 721 2680 181 13 22 chrUextra 17902018 17902691 -11101965 - SAR_DM Satellite Satellite -354 1118 452 1 721 2829 186 22 10 chrUextra 17902792 17903482 -11101174 + SAR_DM Satellite Satellite 261 958 -514 1 721 5990 1 0 0 chrUextra 17903588 17904284 -11100372 - LSU-rRNA_Dme rRNA rRNA -2641 1259 564 1 721 47 19 0 0 chrUextra 17904384 17904438 -11100218 + AT_rich Low_complexity Low_complexity 1 54 0 1 721 2514 57 6 0 chrUextra 17904730 17905062 -11099594 - DMRT1A LINE R1 -13 5170 4837 1 721 494 17 0 0 chrUextra 17905180 17905238 -11099418 - NTS_DM Other Other -182 58 1 1 721 1756 17 17 17 chrUextra 17905238 17905478 -11099178 - NTS_DM Other Other 0 240 1 1 721 1744 21 17 17 chrUextra 17905478 17905718 -11098938 - NTS_DM Other Other 0 240 1 1 721 1175 0 0 0 chrUextra 17905742 17905876 -11098780 - LSU-rRNA_Dme rRNA rRNA -1309 2591 2458 1 721 5297 30 20 6 chrUextra 17905976 17906658 -11097998 + FW_DM LINE Jockey 4001 4692 0 1 721 2574 196 7 19 chrUextra 17906772 17907468 -11097188 + SAR_DM Satellite Satellite 1 687 -354 1 721 34 24 0 0 chrUextra 17908191 17908232 -11096424 + AT_rich Low_complexity Low_complexity 1 41 0 1 721 5554 19 0 0 chrUextra 17908392 17909060 -11095596 + G2_DM LINE Jockey 4 671 -2431 1 721 1609 0 0 0 chrUextra 17909160 17909345 -11095311 - SSU-rRNA_Dme rRNA rRNA -1810 185 1 1 721 32 0 0 0 chrUextra 17909477 17909509 -11095147 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 5160 53 16 4 chrUextra 17909958 17910652 -11094004 + IDEFIX_I LTR Gypsy 2176 2877 -2751 1 721 1323 43 0 0 chrUextra 17910752 17910982 -11093674 + (GAGAA)n Simple_repeat Simple_repeat 1 230 0 1 721 2508 49 24 37 chrUextra 17911548 17911928 -11092728 - DOC4_DM LINE Jockey -1979 812 438 1 721 1701 62 49 1 chrUextra 17911929 17912178 -11092478 - DOC4_DM LINE Jockey -4412 381 1 1 721 2784 177 10 22 chrUextra 17912344 17913025 -11091631 + SAR_DM Satellite Satellite 446 1118 -354 1 721 324 182 20 20 chrUextra 17912939 17913040 -11091616 - XDMR_DM Unknown Unknown 0 360 260 1 721 3921 4 0 0 chrUextra 17913140 17913641 -11091015 + QUASIMODO_I LTR Gypsy 5560 6060 0 1 721 1588 5 0 0 chrUextra 17913641 17913836 -11090820 + QUASIMODO_LTR LTR Gypsy 1 195 -463 1 721 5891 3 0 0 chrUextra 17913936 17914632 -11090024 + ROO_I LTR Pao 2629 3324 -4932 1 721 3015 3 0 0 chrUextra 17914732 17915078 -11089578 - SSU-rRNA_Dme rRNA rRNA -1649 346 1 1 721 32 0 0 0 chrUextra 17915210 17915242 -11089414 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 5973 3 0 1 chrUextra 17915528 17916224 -11088432 - R1_DM LINE R1 -221 5135 4441 1 721 750 94 23 0 chrUextra 17916324 17916452 -11088204 - ARS406_DM Unknown Unknown -222 131 1 1 721 2809 184 9 6 chrUextra 17916360 17917016 -11087640 + SAR_DM Satellite Satellite 195 852 -620 1 721 246 150 0 0 chrUextra 17917186 17917226 -11087430 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 246 150 0 0 chrUextra 17917278 17917318 -11087338 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 255 125 0 0 chrUextra 17917361 17917401 -11087255 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 22 56 0 0 chrUextra 17917414 17917450 -11087206 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 870 9 0 27 chrUextra 17917476 17917588 -11087068 + NTS_DM Other Other 25 133 -107 1 721 1252 18 0 6 chrUextra 17917588 17917753 -11086903 + NTS_DM Other Other 38 201 -39 1 721 2621 177 34 31 chrUextra 17917918 17918612 -11086044 + SAR_DM Satellite Satellite 1 696 -365 1 721 3199 160 10 15 chrUextra 17918713 17919397 -11085259 - SAR_DM Satellite Satellite -439 1033 353 1 721 636 113 0 0 chrUextra 17919508 17919614 -11085042 - ARS406_DM Unknown Unknown -247 106 1 1 721 3109 155 7 19 chrUextra 17919521 17920197 -11084459 + SAR_DM Satellite Satellite 195 862 -610 1 721 435 37 0 0 chrUextra 17920150 17920204 -11084452 - ARS406_DM Unknown Unknown -164 189 136 1 721 5698 27 0 0 chrUextra 17920304 17920999 -11083657 + R1_DM LINE R1 2327 3021 -2335 1 721 1056 267 5 53 chrUextra 17921109 17921540 -11083116 - ROVER-I_DM LTR Gypsy -5407 1177 768 1 721 220 252 26 26 chrUextra 17921559 17921673 -11082983 + (TTTAG)n Simple_repeat Simple_repeat 3 116 0 1 721 276 114 0 0 chrUextra 17921894 17921938 -11082718 + G5_DM LINE Jockey 4324 4367 -489 1 721 1797 44 12 8 chrUextra 17921935 17922189 -11082467 + G5_DM LINE Jockey 4602 4856 0 1 721 1527 107 4 4 chrUextra 17922188 17922432 -11082224 - BS2 LINE Jockey -4464 257 14 1 721 3069 172 9 13 chrUextra 17922695 17923384 -11081272 - SAR_DM Satellite Satellite -396 1076 391 1 721 5865 1 0 0 chrUextra 17924279 17924974 -11079682 - ROO_I LTR Pao -3107 5149 4455 1 721 790 47 0 0 chrUextra 17925074 17925181 -11079475 + ARS406_DM Unknown Unknown 79 185 -168 1 721 2025 195 76 37 chrUextra 17925088 17925769 -11078887 - SAR_DM Satellite Satellite -208 1264 557 1 721 2797 15 0 0 chrUextra 17925869 17926205 -11078451 + DM176_LTR LTR Gypsy 172 507 0 1 721 2833 11 0 31 chrUextra 17926205 17926564 -11078092 + DM176_I LTR Gypsy 1 348 -6072 1 721 4231 24 22 4 chrUextra 17926664 17927215 -11077441 - BATUMI_I LTR Pao -7402 561 1 1 721 1110 14 0 28 chrUextra 17927215 17927359 -11077297 - BATUMI_LTR LTR Pao 0 272 133 1 721 1586 25 0 5 chrUextra 17927459 17927658 -11076998 + QUASIMODO_LTR LTR Gypsy 461 658 0 1 721 5704 4 22 13 chrUextra 17928254 17928949 -11075707 + DOC LINE Jockey 134 834 -3891 1 721 2077 30 4 4 chrUextra 17929049 17929318 -11075338 + CIRCE LINE Composite 4712 4980 -1376 1 721 1744 47 4 8 chrUextra 17929508 17929744 -11074912 - R1_DM LINE R1 -4037 1319 1085 1 721 1437 27 0 4 chrUextra 17929844 17930105 -11074551 + (GAGAA)n Simple_repeat Simple_repeat 1 259 0 1 721 5776 25 0 0 chrUextra 17931434 17932129 -11072527 + R1_DM LINE R1 4171 4865 -491 1 721 420 20 0 0 chrUextra 17932229 17932278 -11072378 + (CAATA)n Simple_repeat Simple_repeat 3 51 0 1 721 5673 7 1 0 chrUextra 17933025 17933719 -11070937 + DM297_I LTR Gypsy 4505 5199 -968 1 721 2802 181 28 20 chrUextra 17933822 17934514 -11070142 - SAR_DM Satellite Satellite -361 1111 415 1 721 2615 58 65 3 chrUextra 17934614 17935309 -11069347 - PROTOP_A DNA P -105 1000 397 1 721 2898 63 5 17 chrUextra 17936338 17936744 -11067912 - Baggins1 LINE LOA -262 5191 4791 1 721 5802 16 1 1 chrUextra 17936999 17937694 -11066962 + HETA LINE telomeric 1574 2268 -3813 1 721 3111 166 12 7 chrUextra 17937807 17938487 -11066169 + SAR_DM Satellite Satellite 326 1008 -464 1 721 4154 2 0 0 chrUextra 17938589 17939065 -11065591 - LSU-rRNA_Dme rRNA rRNA -1637 2263 1788 1 721 1391 6 11 6 chrUextra 17939109 17939284 -11065372 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1613 1 721 2720 188 29 19 chrUextra 17940179 17940874 -11063782 + SAR_DM Satellite Satellite 256 957 -515 1 721 2568 207 14 22 chrUextra 17940974 17941668 -11062988 + SAR_DM Satellite Satellite 1 688 -216 1 721 5698 1 4 6 chrUextra 17941769 17942451 -11062205 + LSU-rRNA_Dme rRNA rRNA 1108 1788 -2112 1 721 5984 3 0 0 chrUextra 17942564 17943259 -11061397 - ROO_I LTR Pao -2433 5823 5129 1 721 5034 16 119 1 chrUextra 17943359 17944054 -11060602 + DOC2_DM LINE Jockey 3740 4516 -277 1 721 6403 3 0 0 chrUextra 17944157 17944849 -11059807 - ROO_I LTR Pao -5367 2889 2198 1 721 642 0 0 0 chrUextra 17945570 17945644 -11059012 - ALUII_DM Unknown Unknown 0 240 167 1 721 2543 4 0 0 chrUextra 17945744 17946021 -11058635 + Invader4_LTR LTR Gypsy 70 346 0 1 721 3890 2 0 0 chrUextra 17946021 17946439 -11058217 + Invader4_I LTR Gypsy 1 418 -1995 1 721 4282 2 0 6 chrUextra 17946539 17947008 -11057648 - SSU-rRNA_Dme rRNA rRNA -1529 466 1 1 721 32 0 0 0 chrUextra 17947140 17947172 -11057484 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 338 0 88 53 chrUextra 17947334 17947391 -11057265 + NTS_DM Other Other 182 240 0 1 721 2006 0 17 13 chrUextra 17947391 17947630 -11057026 + NTS_DM Other Other 1 240 0 1 721 1992 4 17 13 chrUextra 17947630 17947869 -11056787 + NTS_DM Other Other 1 240 0 1 721 1388 13 0 0 chrUextra 17947869 17948026 -11056630 + NTS_DM Other Other 1 157 -83 1 721 2027 183 6 9 chrUextra 17948136 17948823 -11055833 + SAR_DM Satellite Satellite 1 685 -674 1 721 1040 153 5 29 chrUextra 17948931 17949140 -11055516 - TART LINE telomeric -10726 3751 3548 1 721 1335 6 90 0 chrUextra 17949138 17949294 -11055362 - PROTOP_A DNA P -935 170 1 1 721 4096 5 0 0 chrUextra 17949965 17950414 -11054242 - G2_DM LINE Jockey -9 3093 2645 1 721 21 36 0 0 chrUextra 17950827 17950855 -11053801 + AT_rich Low_complexity Low_complexity 1 28 0 1 721 411 95 0 0 chrUextra 17951146 17951209 -11053447 - DMRT1B LINE R1 -3 5180 5118 1 721 6072 25 1 0 chrUextra 17951309 17952004 -11052652 - R1_DM LINE R1 -85 5271 4576 1 721 5393 37 1 22 chrUextra 17952104 17952799 -11051857 - R1_DM LINE R1 -4187 1169 489 1 721 6423 3 6 0 chrUextra 17952899 17953594 -11051062 + Gypsy6_I LTR Gypsy 4415 5113 -1899 1 721 6375 7 1 0 chrUextra 17953694 17954389 -11050267 + Invader1_I LTR Gypsy 1827 2522 -664 1 721 6477 3 0 0 chrUextra 17954489 17955184 -11049472 - SSU-rRNA_Dme rRNA rRNA -1029 966 272 1 721 5806 29 0 1 chrUextra 17955284 17955967 -11048689 + MAX_I LTR Pao 6693 7374 -540 1 721 5960 13 0 1 chrUextra 17956079 17956774 -11047882 + QUASIMODO_I LTR Gypsy 4488 5181 -879 1 722 6341 7 0 0 chrUextra 17956874 17957569 -11047087 - DOC LINE Jockey -221 4504 3810 1 722 445 238 44 6 chrUextra 17957670 17957802 -11046854 - Invader4_I LTR Gypsy -995 1418 1315 1 722 275 279 0 0 chrUextra 17957881 17957949 -11046707 - Invader4_I LTR Gypsy -1111 1302 1235 1 722 24 32 0 0 chrUextra 17957955 17957986 -11046670 + AT_rich Low_complexity Low_complexity 1 31 0 1 722 5708 48 7 1 chrUextra 17958464 17959159 -11045497 - R1_DM LINE R1 -3654 1702 1004 1 722 1132 8 0 0 chrUextra 17959259 17959384 -11045272 - 5S_DM RNA RNA -10 125 1 1 722 1226 15 0 0 chrUextra 17959622 17959757 -11044899 - 5S_DM RNA RNA 0 135 1 1 722 5961 4 35 0 chrUextra 17960054 17960749 -11043907 + Invader2_I LTR Gypsy 3745 4463 -129 1 722 3186 175 11 9 chrUextra 17960850 17961518 -11043138 - SAR_DM Satellite Satellite -612 860 192 1 722 814 107 0 0 chrUextra 17961422 17961544 -11043112 + ARS406_DM Unknown Unknown 1 122 -231 1 722 6051 20 1 1 chrUextra 17961644 17962339 -11042317 - R1_DM LINE R1 -1260 4096 3402 1 722 21 0 0 0 chrUextra 17963030 17963051 -11041605 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 21 0 0 0 chrUextra 17963072 17963093 -11041563 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 367 141 31 0 chrUextra 17963234 17963298 -11041358 - Gypsy12_I LTR Gypsy -5258 288 223 1 722 265 214 28 46 chrUextra 17963273 17963381 -11041275 - Gypsy12_I LTR Gypsy -595 1685 1580 1 722 1387 185 158 21 chrUextra 17963384 17963765 -11040891 - Gypsy12_LTR LTR Gypsy -746 1590 1158 1 722 34 24 0 0 chrUextra 17964291 17964332 -11040324 + AT_rich Low_complexity Low_complexity 1 41 0 1 722 2472 101 20 56 chrUextra 17964825 17965519 -11039137 - DMSAT6 Satellite Satellite 0 669 1 1 722 6159 9 1 1 chrUextra 17965619 17966314 -11038342 + R1_DM LINE R1 3496 4190 -1166 1 722 6132 3 13 1 chrUextra 17966414 17967109 -11037547 + STALKER4_I LTR Gypsy 3055 3757 -2773 1 722 6108 1 1 1 chrUextra 17967209 17967904 -11036752 - R1_DM LINE R1 -4064 1292 598 1 722 6342 0 0 4 chrUextra 17968004 17968699 -11035957 - LSU-rRNA_Dme rRNA rRNA -2681 1219 528 1 722 1431 29 6 0 chrUextra 17968799 17968969 -11035687 - NINJA_I LTR Pao -372 5639 5469 1 722 4594 21 0 4 chrUextra 17968969 17969494 -11035162 + PROTOP_A DNA P 1 523 -582 1 722 3480 5 0 0 chrUextra 17969597 17969976 -11034680 - ROO_I LTR Pao -7877 379 1 1 722 2906 3 3 0 chrUextra 17969976 17970289 -11034367 - ROO_LTR LTR Pao 0 428 115 1 722 6036 11 43 1 chrUextra 17970389 17971084 -11033572 - DOC2_DM LINE Jockey -37 4756 4033 1 722 6324 6 1 0 chrUextra 17971184 17971879 -11032777 + FW_DM LINE Jockey 3082 3777 -915 1 722 3129 177 9 18 chrUextra 17971981 17972647 -11032009 + SAR_DM Satellite Satellite 452 1111 -361 1 722 387 196 10 19 chrUextra 17972570 17972674 -11031982 - XDMR_DM Unknown Unknown 0 360 258 1 722 2497 186 95 29 chrUextra 17972778 17973430 -11031226 - SAR_DM Satellite Satellite -216 1256 562 1 722 504 81 0 13 chrUextra 17973394 17973469 -11031187 + ARS406_DM Unknown Unknown 95 168 -185 1 722 6377 1 1 3 chrUextra 17974365 17975059 -11029597 + SSU-rRNA_Dme rRNA rRNA 752 1444 -551 1 722 5773 28 4 11 chrUextra 17975159 17975854 -11028802 - BATUMI_I LTR Pao -5571 2392 1703 1 722 3178 186 12 9 chrUextra 17975957 17976646 -11028010 - SAR_DM Satellite Satellite -615 857 167 1 722 2683 10 0 0 chrUextra 17976749 17977041 -11027615 + LSU-rRNA_Dme rRNA rRNA 2365 2656 -1244 1 722 3684 2 0 0 chrUextra 17977038 17977444 -11027212 + R1_DM LINE R1 3231 3636 -1720 1 722 5985 22 30 0 chrUextra 17977544 17978239 -11026417 + FW_DM LINE Jockey 304 1019 -3673 1 722 2400 28 11 0 chrUextra 17978339 17978623 -11026033 + R1_DM LINE R1 3391 3677 -1679 1 722 3630 15 0 0 chrUextra 17978625 17979034 -11025622 + R1_DM LINE R1 4026 4434 -922 1 722 4890 36 0 3 chrUextra 17979134 17979726 -11024930 + PROTOP_A DNA P 516 1105 0 1 722 1488 58 0 3 chrUextra 17979929 17980300 -11024356 + (CTTAT)n Simple_repeat Simple_repeat 1 369 0 1 722 1488 19 0 5 chrUextra 17980314 17980527 -11024129 + (AGCTG)n Simple_repeat Simple_repeat 1 211 0 1 722 332 22 0 22 chrUextra 17980578 17980624 -11024032 + (CGAGA)n Simple_repeat Simple_repeat 2 46 0 1 722 27 73 0 0 chrUextra 17981239 17981294 -11023362 + AT_rich Low_complexity Low_complexity 1 55 0 1 722 26 30 0 0 chrUextra 17981334 17981367 -11023289 + AT_rich Low_complexity Low_complexity 1 33 0 1 722 6311 6 0 0 chrUextra 17981519 17982214 -11022442 - R1_DM LINE R1 -2890 2466 1772 1 722 3288 158 22 37 chrUextra 17982314 17983009 -11021647 - SAR_DM Satellite Satellite -446 1026 343 1 722 699 13 0 0 chrUextra 17983109 17983185 -11021471 - NTS_DM Other Other -164 76 1 1 722 1496 20 20 25 chrUextra 17983185 17983389 -11021267 - NTS_DM Other Other 0 240 38 1 722 876 0 0 0 chrUextra 17983389 17983485 -11021171 - NTS_DM Other Other -107 133 38 1 722 888 28 9 0 chrUextra 17983485 17983592 -11021064 - NTS_DM Other Other -107 133 26 1 722 21 57 0 0 chrUextra 17983623 17983658 -11020998 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 1127 21 0 7 chrUextra 17983658 17983804 -11020852 - NTS_DM Other Other -39 201 57 1 722 32 0 0 0 chrUextra 17983975 17984007 -11020649 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 4277 2 0 2 chrUextra 17984139 17984599 -11020057 + SSU-rRNA_Dme rRNA rRNA 1 459 -1536 1 722 6311 0 1 0 chrUextra 17984700 17985376 -11019280 + SSU-rRNA_Dme rRNA rRNA 1319 1995 0 1 722 676 152 13 0 chrUextra 17985613 17985764 -11018892 + (AATAG)n Simple_repeat Simple_repeat 2 154 0 1 722 1986 4 17 17 chrUextra 17986313 17986553 -11018103 + NTS_DM Other Other 1 240 0 1 722 1401 6 0 18 chrUextra 17986553 17986718 -11017938 + NTS_DM Other Other 1 162 -78 1 722 534 119 36 0 chrUextra 17986828 17986912 -11017744 + NTS_DM Other Other 4 90 -150 1 722 4637 95 2 2 chrUextra 17987084 17987779 -11016877 - BATUMI_I LTR Pao -3362 4552 3782 1 722 28 48 0 0 chrUextra 17988048 17988090 -11016566 + AT_rich Low_complexity Low_complexity 1 42 0 1 722 32 0 0 0 chrUextra 17988418 17988450 -11016206 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 6349 7 1 1 chrUextra 17988674 17989369 -11015287 - SSU-rRNA_Dme rRNA rRNA -743 1252 558 1 722 278 103 0 0 chrUextra 17989469 17989508 -11015148 + LSU-rRNA_Dme rRNA rRNA 2582 2620 -1280 1 722 22 56 0 0 chrUextra 17989521 17989557 -11015099 + AT_rich Low_complexity Low_complexity 1 36 0 1 722 936 9 0 27 chrUextra 17989583 17989695 -11014961 + NTS_DM Other Other 25 133 -107 1 722 1350 18 0 6 chrUextra 17989695 17989860 -11014796 + NTS_DM Other Other 38 201 -39 1 722 906 9 0 35 chrUextra 17989912 17990025 -11014631 + NTS_DM Other Other 25 133 -107 1 722 1116 22 0 7 chrUextra 17990025 17990164 -11014492 + NTS_DM Other Other 38 175 -65 1 722 442 305 46 75 chrUextra 17990265 17990959 -11013697 + DM176_I LTR Gypsy 1560 2229 -4355 1 722 6302 1 0 1 chrUextra 17991059 17991754 -11012902 - R1_DM LINE R1 -3123 2233 1540 1 722 4876 26 0 52 chrUextra 17991864 17992477 -11012179 - CIRCE LINE Composite -4471 1885 1305 1 722 1878 21 17 17 chrUextra 17992673 17992913 -11011743 + NTS_DM Other Other 1 240 0 1 722 1899 17 17 17 chrUextra 17992913 17993153 -11011503 + NTS_DM Other Other 1 240 0 1 722 1610 21 0 5 chrUextra 17993153 17993344 -11011312 + NTS_DM Other Other 1 190 -50 1 722 6382 0 0 1 chrUextra 17993444 17994139 -11010517 + ROO_I LTR Pao 1884 2577 -5679 1 722 2931 87 5 20 chrUextra 17994239 17994638 -11010018 - Gypsy12_I LTR Gypsy -497 5049 4657 1 722 1154 21 107 0 chrUextra 17994636 17994776 -11009880 - PROTOP_B DNA P -998 155 1 1 722 2887 3 0 3 chrUextra 17995034 17995351 -11009305 + STALKER4_LTR LTR Gypsy 87 402 0 1 722 354 25 0 0 chrUextra 17995351 17995378 -11009278 + STALKER4_I LTR Gypsy 1 27 -6503 1 722 309 96 0 37 chrUextra 17995378 17995432 -11009224 + Stalker2_I LTR Gypsy 1 52 -7350 1 722 481 200 142 0 chrUextra 17995607 17995727 -11008929 + Stalker2_I LTR Gypsy 242 378 -7024 1 722 853 97 226 0 chrUextra 17996015 17996170 -11008486 + Rehavkus-1_DY DNA Tc1 2 191 -5424 1 722 670 93 41 0 chrUextra 17996163 17996260 -11008396 - Baggins1 LINE LOA -626 4827 4727 1 722 24 0 0 0 chrUextra 17996499 17996523 -11008133 + AT_rich Low_complexity Low_complexity 1 24 0 1 722 3311 166 14 19 chrUextra 17996624 17997319 -11007337 - SAR_DM Satellite Satellite -525 947 256 1 722 3392 168 16 9 chrUextra 17997440 17998114 -11006542 + SAR_DM Satellite Satellite 326 1004 -468 1 722 5996 9 0 1 chrUextra 17998214 17998909 -11005747 + DM297_I LTR Gypsy 4334 5027 -1140 1 722 6150 16 1 3 chrUextra 17999009 17999703 -11004953 - LSU-rRNA_Dme rRNA rRNA -2348 1552 860 1 722 416 86 0 0 chrUextra 17999942 18000000 -11004656 + Rehavkus-1_DY DNA Tc1 216 273 -5342 1 722 321 42 0 40 chrUextra 18000012 18000062 -11004594 + FB4_DM DNA Tc1 80 127 -3962 1 722 502 0 64 0 chrUextra 18000337 18000415 -11004241 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 722 5002 30 10 37 chrUextra 18000599 18001294 -11003362 - DOC2_DM LINE Jockey -3838 955 280 1 722 785 116 0 15 chrUextra 18001394 18001525 -11003131 - TART LINE telomeric -7243 7234 7106 1 722 874 146 6 30 chrUextra 18001527 18001696 -11002960 - TART LINE telomeric -7328 7149 6985 1 722 418 80 77 39 chrUextra 18001686 18001764 -11002892 - TART LINE telomeric -3805 10672 10592 1 722 1258 126 269 6 chrUextra 18001754 18002089 -11002567 - TAHRE LINE telomeric -4 10459 10037 1 722 5521 30 0 0 chrUextra 18002189 18002884 -11001772 + MDG1_I LTR Gypsy 1957 2651 -3945 1 722 5873 3 0 0 chrUextra 18002984 18003679 -11000977 + Copia_I LTR Copia 1824 2518 -2075 1 722 2018 8 0 0 chrUextra 18003779 18004013 -11000643 - Invader4_I LTR Gypsy -2179 234 1 1 722 3022 3 0 0 chrUextra 18004013 18004359 -11000297 - Invader4_LTR LTR Gypsy 0 346 1 1 722 898 0 9 0 chrUextra 18004359 18004468 -11000188 - Invader4_I LTR Gypsy 0 2413 2304 1 722 3081 175 10 7 chrUextra 18004574 18005269 -10999387 - SAR_DM Satellite Satellite -435 1037 341 1 722 5853 1 1 7 chrUextra 18005369 18006064 -10998592 - LSU-rRNA_Dme rRNA rRNA -2391 1509 819 1 722 374 186 10 19 chrUextra 18006169 18006273 -10998383 + XDMR_DM Unknown Unknown 258 360 0 1 722 2681 185 7 21 chrUextra 18006187 18006859 -10997797 - SAR_DM Satellite Satellite -353 1119 457 1 722 5933 6 0 0 chrUextra 18006959 18007654 -10997002 - DOC LINE Jockey -1567 3158 2464 1 722 2668 168 9 10 chrUextra 18007754 18008332 -10996324 + SAR_DM Satellite Satellite 418 994 -478 1 722 861 50 0 0 chrUextra 18008330 18008449 -10996207 - ARS406_DM Unknown Unknown -171 182 64 1 722 2483 90 20 4 chrUextra 18008549 18009242 -10995414 + DMSAT6 Satellite Satellite 1 703 -152 1 722 5666 19 6 0 chrUextra 18009344 18010039 -10994617 - ROO_I LTR Pao -5865 2391 1693 1 722 5940 13 0 0 chrUextra 18010139 18010834 -10993822 + LSU-rRNA_Dme rRNA rRNA 1840 2534 -1366 1 722 5689 11 6 1 chrUextra 18010934 18011629 -10993027 - PROTOP DNA P -1949 2531 1834 1 722 5706 10 6 0 chrUextra 18011729 18012424 -10992232 + ROO_I LTR Pao 2742 3440 -4816 1 722 3063 172 10 7 chrUextra 18012530 18013210 -10991446 - SAR_DM Satellite Satellite -593 879 198 1 722 37 39 0 0 chrUextra 18013348 18013399 -10991257 + AT_rich Low_complexity Low_complexity 1 51 0 1 722 28 48 0 0 chrUextra 18013754 18013796 -10990860 + AT_rich Low_complexity Low_complexity 1 42 0 1 722 5300 21 89 6 chrUextra 18014114 18014809 -10989847 + FW_DM LINE Jockey 3683 4435 -257 1 722 6062 1 0 0 chrUextra 18014909 18015604 -10989052 - ROO_I LTR Pao -559 7697 7003 1 722 5937 3 0 3 chrUextra 18015704 18016399 -10988257 - R1_DM LINE R1 -435 4921 4229 1 722 1224 0 0 0 chrUextra 18016499 18016635 -10988021 + (GAGAA)n Simple_repeat Simple_repeat 4 139 0 1 722 2407 44 0 3 chrUextra 18018091 18018408 -10986248 + G2_DM LINE Jockey 2567 2882 -220 1 722 489 110 0 0 chrUextra 18018409 18018509 -10986147 + G2_DM LINE Jockey 3000 3099 -3 1 722 561 199 0 0 chrUextra 18018540 18018706 -10985950 + (CTATT)n Simple_repeat Simple_repeat 4 169 0 1 722 326 192 14 0 chrUextra 18018706 18018779 -10985877 + (TTATG)n Simple_repeat Simple_repeat 3 76 0 1 722 3166 156 14 14 chrUextra 18018884 18019576 -10985080 - SAR_DM Satellite Satellite -435 1037 346 1 722 5108 45 19 11 chrUextra 18020474 18021169 -10983487 - BATUMI_I LTR Pao -4196 3767 3068 1 722 2736 195 12 25 chrUextra 18021269 18021964 -10982692 + SAR_DM Satellite Satellite 1 686 -219 1 722 1648 18 18 18 chrUextra 18022064 18022293 -10982363 + NTS_DM Other Other 12 240 0 1 722 1824 8 17 13 chrUextra 18022293 18022532 -10982124 + NTS_DM Other Other 1 240 0 1 722 1692 5 18 14 chrUextra 18022532 18022752 -10981904 + NTS_DM Other Other 1 221 -19 1 722 1856 35 58 4 chrUextra 18022859 18023116 -10981540 + ROO_I LTR Pao 5620 5890 -2366 1 722 5821 0 1 1 chrUextra 18023681 18024349 -10980307 - LSU-rRNA_Dme rRNA rRNA 0 3900 3233 1 722 5983 0 0 0 chrUextra 18024449 18025144 -10979512 + FW_DM LINE Jockey 1423 2117 -2575 1 722 3054 174 12 7 chrUextra 18025261 18025939 -10978717 + SAR_DM Satellite Satellite 326 1006 -466 1 722 6013 1 3 1 chrUextra 18026039 18026734 -10977922 - SSU-rRNA_Dme rRNA rRNA -803 1192 497 1 722 2709 182 18 11 chrUextra 18027629 18028291 -10976365 - SAR_DM Satellite Satellite -614 858 192 1 722 777 101 0 8 chrUextra 18028194 18028324 -10976332 + ARS406_DM Unknown Unknown 1 129 -224 1 722 2408 4 0 0 chrUextra 18028424 18028701 -10975955 - LSU-rRNA_Dme rRNA rRNA -984 2916 2640 1 722 2728 9 0 0 chrUextra 18028699 18029017 -10975639 - R1_DM LINE R1 0 5356 5039 1 722 753 11 11 0 chrUextra 18029027 18029118 -10975538 - R1_DM LINE R1 0 5356 5265 1 722 1373 199 72 80 chrUextra 18029219 18029914 -10974742 - TAHRE LINE telomeric -2966 7497 6944 1 722 25 0 0 0 chrUextra 18030014 18030039 -10974617 + AT_rich Low_complexity Low_complexity 1 25 0 1 722 32 0 0 0 chrUextra 18030368 18030400 -10974256 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 1542 0 0 0 chrUextra 18030532 18030709 -10973947 + SSU-rRNA_Dme rRNA rRNA 1 177 -1818 1 722 2367 21 111 65 chrUextra 18030809 18031160 -10973496 - Gypsy3_LTR LTR Gypsy -31 367 1 1 722 3010 3 0 0 chrUextra 18031160 18031504 -10973152 - Gypsy3_I LTR Gypsy 0 6177 5834 1 722 5817 20 0 0 chrUextra 18031604 18032299 -10972357 - R1_DM LINE R1 -590 4766 4072 1 722 5912 0 0 3 chrUextra 18032399 18033094 -10971562 - LSU-rRNA_Dme rRNA rRNA -2682 1218 526 1 722 6021 3 0 0 chrUextra 18033194 18033889 -10970767 + FW_DM LINE Jockey 3683 4377 -315 1 722 6023 4 0 0 chrUextra 18033989 18034683 -10969973 + R2_DM LINE R2 2320 3013 -594 1 722 6121 1 0 0 chrUextra 18034784 18035479 -10969177 + R2_DM LINE R2 1285 1979 -1628 1 722 2739 189 16 22 chrUextra 18035582 18036274 -10968382 + SAR_DM Satellite Satellite 1 688 -208 1 722 3101 182 7 6 chrUextra 18036378 18037069 -10967587 - SAR_DM Satellite Satellite -526 946 255 1 722 6072 1 1 0 chrUextra 18037169 18037864 -10966792 - LSU-rRNA_Dme rRNA rRNA -394 3506 2811 1 722 6036 4 0 0 chrUextra 18037964 18038659 -10965997 + SSU-rRNA_Dme rRNA rRNA 449 1143 -852 1 722 4898 73 4 3 chrUextra 18038759 18039450 -10965206 - S_DM DNA Tc1 -458 1278 587 1 722 4779 33 82 4 chrUextra 18039554 18040247 -10964409 - DMRT1B LINE R1 -3243 1940 1194 1 722 5962 3 1 0 chrUextra 18040349 18041044 -10963612 + Invader3_I LTR Gypsy 2551 3246 -1642 1 722 4062 18 24 0 chrUextra 18041168 18041661 -10962995 - CIRCE LINE Composite -5851 505 1 1 722 1414 45 0 0 chrUextra 18041661 18041839 -10962817 - CIRCE LINE Composite 0 6356 6179 1 722 669 115 0 0 chrUextra 18041939 18042052 -10962604 - ARS406_DM Unknown Unknown -240 113 1 1 722 2785 183 22 10 chrUextra 18041959 18042634 -10962022 + SAR_DM Satellite Satellite 195 877 -595 1 722 1252 18 0 6 chrUextra 18042750 18042915 -10961741 + NTS_DM Other Other 38 201 -39 1 722 21 57 0 0 chrUextra 18042915 18042950 -10961706 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 870 9 0 27 chrUextra 18042976 18043088 -10961568 + NTS_DM Other Other 25 133 -107 1 722 1252 18 0 6 chrUextra 18043088 18043253 -10961403 + NTS_DM Other Other 38 201 -39 1 722 21 57 0 0 chrUextra 18043253 18043288 -10961368 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 802 9 9 36 chrUextra 18043314 18043426 -10961230 + NTS_DM Other Other 25 133 -107 1 722 5149 45 30 9 chrUextra 18043529 18044224 -10960432 - CIRCE LINE Composite -3688 2668 1959 1 722 6058 1 1 0 chrUextra 18044326 18045019 -10959637 - LSU-rRNA_Dme rRNA rRNA 0 3900 3207 1 722 5433 35 9 1 chrUextra 18045119 18045814 -10958842 - R1_DM LINE R1 -2240 3116 2417 1 722 3853 35 43 21 chrUextra 18045914 18046446 -10958210 - CIRCE LINE Composite -3925 2431 1888 1 722 417 344 22 33 chrUextra 18046152 18046513 -10958143 - Ulysses_I LTR Gypsy -1504 4877 4521 1 722 565 72 12 0 chrUextra 18046526 18046609 -10958047 - CIRCE LINE Composite -4474 1882 1799 1 722 5227 3 5 6 chrUextra 18046772 18047404 -10957252 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1158 1 722 2832 159 53 4 chrUextra 18047504 18048199 -10956457 - TART_B1 LINE telomeric -8632 2022 1294 1 722 4041 0 4 0 chrUextra 18048299 18048763 -10955893 + SSU-rRNA_Dme rRNA rRNA 1530 1995 0 1 722 21 89 0 0 chrUextra 18048782 18048838 -10955818 + AT_rich Low_complexity Low_complexity 1 56 0 1 722 2838 169 15 25 chrUextra 18049109 18049789 -10954867 - SAR_DM Satellite Satellite -361 1111 439 1 722 2839 194 7 10 chrUextra 18049889 18050580 -10954076 + SAR_DM Satellite Satellite 207 895 -577 1 722 288 0 0 0 chrUextra 18050684 18050717 -10953939 - NTS_DM Other Other -207 33 1 1 722 1850 4 17 13 chrUextra 18050717 18050956 -10953700 - NTS_DM Other Other 0 240 1 1 722 1716 25 17 17 chrUextra 18050956 18051196 -10953460 - NTS_DM Other Other 0 240 1 1 722 1152 28 27 22 chrUextra 18051196 18051379 -10953277 - NTS_DM Other Other 0 240 57 1 722 5969 3 0 1 chrUextra 18051479 18052174 -10952482 + FW_DM LINE Jockey 3152 3845 -847 1 722 5748 6 0 7 chrUextra 18052274 18052969 -10951687 - STALKER4_I LTR Gypsy -973 5557 4868 1 722 1176 0 0 0 chrUextra 18053086 18053221 -10951435 + 5S_DM RNA RNA 1 135 0 1 722 1157 15 0 0 chrUextra 18053445 18053580 -10951076 + 5S_DM RNA RNA 1 135 0 1 722 32 0 0 0 chrUextra 18054044 18054076 -10950580 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 3039 6 0 0 chrUextra 18054208 18054559 -10950097 + SSU-rRNA_Dme rRNA rRNA 1 351 -1644 1 722 2948 190 14 6 chrUextra 18054659 18055354 -10949302 + SAR_DM Satellite Satellite 302 1002 -470 1 722 230 281 11 11 chrUextra 18056004 18056094 -10948562 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 1 722 2358 164 9 9 chrUextra 18056249 18056944 -10947712 - SAR_DM Satellite Satellite -569 695 1 1 722 880 82 6 20 chrUextra 18057052 18057739 -10946917 - RSP Satellite Satellite 0 677 1 1 722 1306 203 39 3 chrUextra 18057839 18058533 -10946123 + SAR_DM Satellite Satellite 1 719 -524 1 722 320 161 10 147 chrUextra 18058774 18058876 -10945780 - DNAREP1_DM LINE Penelope -6 588 501 1 722 1085 50 12 6 chrUextra 18058880 18059042 -10945614 + S2_DM DNA Tc1 1 163 -1572 1 722 314 173 0 58 chrUextra 18059068 18059154 -10945502 - DNAREP1_DM LINE Penelope -26 568 488 1 722 5890 0 0 1 chrUextra 18059429 18060124 -10944532 - FW_DM LINE Jockey -1400 3292 2599 1 722 4945 53 40 0 chrUextra 18060224 18060917 -10943739 + R1_DM LINE R1 399 1119 -4237 1 722 5581 29 0 0 chrUextra 18061019 18061714 -10942942 + FW_DM LINE Jockey 2801 3495 -1197 1 722 21 57 0 0 chrUextra 18062439 18062474 -10942182 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 5946 3 0 0 chrUextra 18062609 18063304 -10941352 + Invader3_I LTR Gypsy 3102 3796 -1092 1 722 257 0 30 0 chrUextra 18063404 18063437 -10941219 - NTS_DM Other Other -206 34 1 1 722 1861 0 17 13 chrUextra 18063437 18063676 -10940980 - NTS_DM Other Other 0 240 1 1 722 1843 4 17 13 chrUextra 18063676 18063915 -10940741 - NTS_DM Other Other 0 240 1 1 722 1328 0 22 16 chrUextra 18063915 18064098 -10940558 - NTS_DM Other Other 0 240 57 1 722 2390 194 19 19 chrUextra 18064199 18064815 -10939841 - SAR_DM Satellite Satellite -361 1111 496 1 722 569 28 0 0 chrUextra 18064820 18064892 -10939764 + ARS406_DM Unknown Unknown 90 161 -192 1 722 1629 18 14 22 chrUextra 18064992 18065215 -10939441 - NTS_DM Other Other -19 221 1 1 722 1756 17 17 17 chrUextra 18065215 18065455 -10939201 - NTS_DM Other Other 0 240 1 1 722 1665 18 17 17 chrUextra 18065455 18065686 -10938970 - NTS_DM Other Other 0 240 10 1 722 5689 22 1 1 chrUextra 18065786 18066480 -10938176 - R1_DM LINE R1 -1413 3943 3250 1 722 3556 2 0 2 chrUextra 18066580 18066996 -10937660 - LSU-rRNA_Dme rRNA rRNA -846 3054 2640 1 722 2412 4 4 0 chrUextra 18066994 18067274 -10937382 - R1_DM LINE R1 0 5356 5076 1 722 1620 6 0 0 chrUextra 18068168 18068511 -10936145 + (CAAGA)n Simple_repeat Simple_repeat 1 343 0 1 722 5472 4 4 1 chrUextra 18068962 18069656 -10935000 + ROVER-I_DM LTR Gypsy 5646 6341 -243 1 722 5741 11 1 1 chrUextra 18069756 18070449 -10934207 + R1_DM LINE R1 3524 4216 -1140 1 722 5039 36 10 28 chrUextra 18071360 18072037 -10932619 - BATUMI_I LTR Pao -5196 2767 2103 1 722 5969 1 1 3 chrUextra 18072138 18072832 -10931824 - SSU-rRNA_Dme rRNA rRNA -341 1654 962 1 722 5931 1 3 3 chrUextra 18072932 18073626 -10931030 + LSU-rRNA_Dme rRNA rRNA 935 1628 -2272 1 722 28 48 0 0 chrUextra 18073812 18073854 -10930802 + AT_rich Low_complexity Low_complexity 1 42 0 1 722 486 129 24 0 chrUextra 18074128 18074213 -10930443 - NTS_DM Other Other -150 90 4 1 722 636 21 0 31 chrUextra 18074323 18074420 -10930236 - NTS_DM Other Other -78 162 69 1 722 1616 18 18 18 chrUextra 18074520 18074746 -10929910 + NTS_DM Other Other 15 240 0 1 722 1831 8 17 13 chrUextra 18074746 18074985 -10929671 + NTS_DM Other Other 1 240 0 1 722 1773 0 18 13 chrUextra 18074985 18075214 -10929442 + NTS_DM Other Other 1 230 -10 1 722 3522 5 2 0 chrUextra 18075314 18075723 -10928933 - LSU-rRNA_Dme rRNA rRNA -913 2987 2578 1 722 2527 0 0 0 chrUextra 18075719 18076008 -10928648 - R2_DM LINE R2 -2 3605 3317 1 722 2517 202 10 23 chrUextra 18076108 18076792 -10927864 + SAR_DM Satellite Satellite 444 1118 -354 1 722 470 168 9 78 chrUextra 18076902 18077018 -10927638 - HETRP_DM Satellite Satellite -247 1625 1518 1 722 501 217 8 8 chrUextra 18077162 18077283 -10927373 - HETRP_DM Satellite Satellite -203 1669 1549 1 722 282 29 0 0 chrUextra 18077283 18077318 -10927338 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 722 655 186 7 14 chrUextra 18077449 18077591 -10927065 - HETRP_DM Satellite Satellite -203 1669 1529 1 722 2961 177 12 13 chrUextra 18077696 18078372 -10926284 - SAR_DM Satellite Satellite -472 1000 326 1 722 540 200 110 39 chrUextra 18078528 18078823 -10925833 - Gypsy12_LTR LTR Gypsy -553 1727 1443 1 722 1154 164 95 20 chrUextra 18078801 18079184 -10925472 - Gypsy12_LTR LTR Gypsy -661 1675 1170 1 722 5678 9 3 1 chrUextra 18079284 18079978 -10924678 - STALKER4_I LTR Gypsy -4605 1925 1231 1 722 5656 30 0 3 chrUextra 18080079 18080772 -10923884 - MAX_I LTR Pao -674 7240 6550 1 722 1111 18 24 24 chrUextra 18080874 18081044 -10923612 + NTS_DM Other Other 71 240 0 1 722 1734 21 17 17 chrUextra 18081044 18081284 -10923372 + NTS_DM Other Other 1 240 0 1 722 1753 25 12 17 chrUextra 18081284 18081525 -10923131 + NTS_DM Other Other 1 240 0 1 722 343 24 0 0 chrUextra 18081525 18081566 -10923090 + NTS_DM Other Other 1 41 -199 1 722 5975 0 1 0 chrUextra 18081666 18082360 -10922296 + ROO_I LTR Pao 5230 5924 -2332 1 722 938 321 35 36 chrUextra 18082484 18083150 -10921506 + Copia2_I LTR Copia 1550 2214 -1948 1 722 2794 185 19 7 chrUextra 18084048 18084722 -10919934 - SAR_DM Satellite Satellite -596 876 195 1 722 522 123 65 9 chrUextra 18084635 18084742 -10919914 + ARS406_DM Unknown Unknown 1 113 -240 1 722 2055 38 70 42 chrUextra 18084844 18085200 -10919456 + PROTOP_B DNA P 571 936 -217 1 722 286 50 0 0 chrUextra 18085193 18085253 -10919403 + PROTOP_B DNA P 572 631 -522 1 722 1993 54 14 0 chrUextra 18085258 18085535 -10919121 + PROTOP_B DNA P 794 1074 -79 1 722 5478 29 0 13 chrUextra 18085636 18086330 -10918326 + FW_DM LINE Jockey 1252 1936 -2756 1 722 5599 20 0 6 chrUextra 18086430 18087124 -10917532 - FW_DM LINE Jockey -2478 2214 1525 1 722 2787 171 50 12 chrUextra 18087225 18087912 -10916744 - SAR_DM Satellite Satellite -514 958 246 1 722 251 130 0 0 chrUextra 18087872 18087918 -10916738 + ARS406_DM Unknown Unknown 1 46 -307 1 723 5725 16 0 0 chrUextra 18088018 18088712 -10915944 - NINJA_I LTR Pao -4797 1214 521 1 723 5946 6 1 0 chrUextra 18088812 18089506 -10915150 - R1_DM LINE R1 -576 4780 4086 1 723 3232 166 9 9 chrUextra 18089608 18090300 -10914356 - SAR_DM Satellite Satellite -435 1037 346 1 723 5996 3 0 0 chrUextra 18090400 18091094 -10913562 - FW_DM LINE Jockey -2302 2390 1697 1 723 2781 3 0 0 chrUextra 18091194 18091527 -10913129 + FW_DM LINE Jockey 4360 4692 0 1 723 1560 177 14 3 chrUextra 18091535 18091887 -10912769 + SAR_DM Satellite Satellite 507 862 -610 1 723 2973 174 11 23 chrUextra 18091989 18092682 -10911974 - SAR_DM Satellite Satellite -361 1111 427 1 723 767 0 0 0 chrUextra 18093576 18093669 -10910987 - NOMAD_LTR LTR Gypsy -425 93 1 1 723 2689 164 17 12 chrUextra 18093669 18094267 -10910389 - SAR_DM Satellite Satellite -626 846 246 1 723 2767 90 0 2 chrUextra 18094455 18094856 -10909800 + Jockey2 LINE Jockey 1421 1820 -1608 1 723 695 39 449 0 chrUextra 18094864 18095064 -10909592 - PROTOP_B DNA P -297 856 567 1 723 5550 32 6 0 chrUextra 18095164 18095858 -10908798 + R1_DM LINE R1 4208 4905 -451 1 723 4356 64 8 4 chrUextra 18096752 18097446 -10907210 + G2_DM LINE Jockey 4 513 -2589 1 723 3128 171 52 10 chrUextra 18097554 18098240 -10906416 - STALKER4_I LTR Gypsy -4752 1778 1064 1 723 3031 175 9 9 chrUextra 18098353 18099034 -10905622 + SAR_DM Satellite Satellite 324 1004 -468 1 723 2015 0 0 0 chrUextra 18099134 18099363 -10905293 + LSU-rRNA_Dme rRNA rRNA 2404 2632 -1268 1 723 3951 11 4 0 chrUextra 18099363 18099828 -10904828 + R1_DM LINE R1 1 467 -4889 1 723 5889 1 0 0 chrUextra 18099928 18100622 -10904034 - LSU-rRNA_Dme rRNA rRNA -2858 1042 349 1 723 710 11 11 0 chrUextra 18100722 18100809 -10903847 + (TATAA)n Simple_repeat Simple_repeat 4 91 0 1 723 4569 4 0 2 chrUextra 18100809 18101343 -10903313 - QUASIMODO_LTR LTR Gypsy -2 656 124 1 723 633 0 0 0 chrUextra 18101343 18101416 -10903240 - DM1731_I LTR Copia -3418 558 486 1 723 5788 9 0 0 chrUextra 18101516 18102210 -10902446 + STALKER4_I LTR Gypsy 2159 2852 -3678 1 723 5883 1 1 0 chrUextra 18102310 18103004 -10901652 + LSU-rRNA_Dme rRNA rRNA 419 1113 -2787 1 723 3171 10 0 2 chrUextra 18103104 18103504 -10901152 + TART_B1 LINE telomeric 10129 10527 -127 1 723 2544 10 0 0 chrUextra 18103503 18103798 -10900858 + TART_B1 LINE telomeric 3137 3431 -7223 1 723 2654 10 0 0 chrUextra 18104692 18104997 -10899659 - Invader1_I LTR Gypsy -2881 305 1 1 723 3286 15 3 0 chrUextra 18104997 18105386 -10899270 - Invader1_LTR LTR Gypsy 0 423 34 1 723 5572 33 4 0 chrUextra 18105486 18106180 -10898476 + R1_DM LINE R1 2728 3424 -1932 1 723 5690 20 0 0 chrUextra 18107074 18107768 -10896888 - FW_DM LINE Jockey -1534 3158 2465 1 723 5757 13 27 0 chrUextra 18107868 18108562 -10896094 + Gypsy4_I LTR Gypsy 3246 3958 -2330 1 723 2968 172 68 18 chrUextra 18108667 18109356 -10895300 + SAR_DM Satellite Satellite 1 723 -208 1 723 1826 41 4 4 chrUextra 18109456 18109699 -10894957 + R1_DM LINE R1 3297 3539 -1817 1 723 3645 15 2 9 chrUextra 18109689 18110150 -10894506 + R1_DM LINE R1 3767 4224 -1132 1 723 475 82 72 0 chrUextra 18110251 18110348 -10894308 + CT-rich Low_complexity Low_complexity 2 105 0 1 723 5325 30 43 3 chrUextra 18111045 18111738 -10892918 - DMCR1A LINE CR1 -798 3672 2952 1 723 645 100 9 9 chrUextra 18112632 18112743 -10891913 - ARS406_DM Unknown Unknown -242 111 1 1 723 3036 165 13 15 chrUextra 18112649 18113326 -10891330 + SAR_DM Satellite Satellite 195 870 -602 1 723 5926 6 0 0 chrUextra 18113426 18114120 -10890536 + DOC LINE Jockey 1663 2356 -2369 1 723 5870 4 0 1 chrUextra 18114220 18114914 -10889742 + DOC LINE Jockey 1204 1896 -2829 1 723 5025 5 0 0 chrUextra 18115014 18115598 -10889058 + R1_DM LINE R1 4773 5356 0 1 723 941 9 9 0 chrUextra 18115596 18115708 -10888948 + LSU-rRNA_Dme rRNA rRNA 2640 2752 -1148 1 723 5269 42 20 1 chrUextra 18115808 18116501 -10888155 - R1_DM LINE R1 -3950 1406 701 1 723 5609 19 0 0 chrUextra 18116602 18117296 -10887360 - MDG1_I LTR Gypsy -959 5637 4944 1 723 3075 143 22 33 chrUextra 18117423 18118090 -10886566 + SAR_DM Satellite Satellite 369 1028 -444 1 723 5694 13 1 0 chrUextra 18118190 18118884 -10885772 + PROTOP_A DNA P 363 1057 -48 1 723 4122 2 0 0 chrUextra 18118984 18119456 -10885200 - DOC LINE Jockey -4252 473 2 1 723 400 221 23 0 chrUextra 18119502 18119674 -10884982 + (AATAG)n Simple_repeat Simple_repeat 2 177 0 1 723 28 79 0 0 chrUextra 18120327 18120390 -10884266 + AT_rich Low_complexity Low_complexity 1 63 0 1 723 23 68 0 0 chrUextra 18120421 18120465 -10884191 + AT_rich Low_complexity Low_complexity 1 44 0 1 723 2224 112 16 34 chrUextra 18120574 18121247 -10883409 - DMSAT6 Satellite Satellite -2 661 1 1 723 264 250 0 0 chrUextra 18121405 18121461 -10883195 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 1 723 654 269 41 84 chrUextra 18121570 18121988 -10882668 + Gypsy12_LTR LTR Gypsy 679 1078 -1258 1 723 922 168 102 15 chrUextra 18122382 18122587 -10882069 + DMLTR5 LTR Gypsy 44 266 0 1 723 351 85 661 14 chrUextra 18122586 18122718 -10881938 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 1 723 6010 0 0 1 chrUextra 18122954 18123648 -10881008 + R2_DM LINE R2 571 1263 -2344 1 723 6032 1 1 0 chrUextra 18124542 18125236 -10879420 + DOC LINE Jockey 3262 3956 -769 1 723 550 331 24 51 chrUextra 18125582 18125954 -10878702 - GTWIN_I LTR Gypsy -2298 3562 3201 1 723 227 297 0 0 chrUextra 18126254 18126328 -10878328 + HMSBEAGLE_I LTR Gypsy 2873 2946 -3583 1 723 1231 254 6 3 chrUextra 18126480 18126824 -10877832 + HMSBEAGLE_I LTR Gypsy 3100 3444 -3085 1 723 2663 186 25 9 chrUextra 18126924 18127592 -10877064 + SAR_DM Satellite Satellite 279 957 -515 1 723 984 189 25 9 chrUextra 18127718 18128410 -10876246 + SAR_DM Satellite Satellite 1 703 -680 1 723 1026 0 0 0 chrUextra 18128512 18128626 -10876030 + (TCTTG)n Simple_repeat Simple_repeat 2 115 0 1 723 5994 1 0 3 chrUextra 18129306 18130000 -10874656 + LSU-rRNA_Dme rRNA rRNA 1822 2513 -1387 1 723 3533 0 0 0 chrUextra 18130393 18130794 -10873862 + ROO_LTR LTR Pao 1 401 -27 1 723 23 0 0 0 chrUextra 18131392 18131415 -10873241 + AT_rich Low_complexity Low_complexity 1 23 0 1 723 237 35 0 0 chrUextra 18131559 18131588 -10873068 + DIVER2_I LTR Pao 1366 1394 -2753 1 723 257 0 30 0 chrUextra 18131688 18131721 -10872935 - NTS_DM Other Other -206 34 1 1 723 1861 0 17 13 chrUextra 18131721 18131960 -10872696 - NTS_DM Other Other 0 240 1 1 723 1861 0 17 13 chrUextra 18131960 18132199 -10872457 - NTS_DM Other Other 0 240 1 1 723 1328 0 22 16 chrUextra 18132199 18132382 -10872274 - NTS_DM Other Other 0 240 57 1 723 34 24 0 0 chrUextra 18132729 18132770 -10871886 + AT_rich Low_complexity Low_complexity 1 41 0 1 723 5673 7 40 1 chrUextra 18133276 18133970 -10870686 + Invader4_I LTR Gypsy 786 1506 -907 1 723 3491 36 59 15 chrUextra 18134070 18134546 -10870110 - ROO_I LTR Pao -3567 4689 4193 1 723 1681 24 5 0 chrUextra 18134555 18134764 -10869892 + FW_DM LINE Jockey 1750 1959 -2733 1 723 5522 7 6 1 chrUextra 18134864 18135558 -10869098 - DM176_I LTR Gypsy -4776 1644 948 1 723 21 0 0 0 chrUextra 18135787 18135808 -10868848 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 410 220 70 85 chrUextra 18135875 18136074 -10868582 - HMSBEAGLE_I LTR Gypsy -6110 419 224 1 723 5629 22 1 1 chrUextra 18136452 18137144 -10867512 + R1_DM LINE R1 3525 4216 -1140 1 723 5606 20 0 0 chrUextra 18137246 18137940 -10866716 - ROO_I LTR Pao -3082 5174 4481 1 723 1998 200 12 7 chrUextra 18138040 18138463 -10866193 - Gypsy_I LTR Gypsy -5631 876 452 1 723 1942 21 25 0 chrUextra 18138495 18138734 -10865922 - BS2 LINE Jockey -1105 3616 3372 1 723 2876 185 7 19 chrUextra 18138838 18139528 -10865128 - SAR_DM Satellite Satellite -361 1111 430 1 723 1314 51 6 8 chrUextra 18139628 18140139 -10864517 + (GAGAA)n Simple_repeat Simple_repeat 1 509 0 1 723 25 0 0 0 chrUextra 18140488 18140513 -10864143 + AT_rich Low_complexity Low_complexity 1 25 0 1 723 641 92 20 10 chrUextra 18140633 18140732 -10863924 - STALKER4_LTR LTR Gypsy -23 379 280 1 723 3039 21 0 29 chrUextra 18140732 18141116 -10863540 + CIRCE LINE Composite 1428 1800 -4556 1 723 5419 14 1 0 chrUextra 18142010 18142704 -10861952 + QUASIMODO_I LTR Gypsy 4826 5520 -540 1 723 1503 43 0 0 chrUextra 18142804 18142992 -10861664 + CIRCE LINE Composite 6169 6356 0 1 723 4062 18 24 0 chrUextra 18142992 18143485 -10861171 + CIRCE LINE Composite 1 505 -5851 1 723 5205 11 25 4 chrUextra 18143598 18144292 -10860364 + QUASIMODO_I LTR Gypsy 4770 5477 -583 1 723 513 37 0 12 chrUextra 18144392 18144474 -10860182 + NTS_DM Other Other 121 201 -39 1 723 870 9 0 27 chrUextra 18144526 18144638 -10860018 + NTS_DM Other Other 25 133 -107 1 723 1252 18 0 6 chrUextra 18144638 18144803 -10859853 + NTS_DM Other Other 38 201 -39 1 723 870 9 0 27 chrUextra 18144855 18144967 -10859689 + NTS_DM Other Other 25 133 -107 1 723 899 26 0 0 chrUextra 18144967 18145084 -10859572 + NTS_DM Other Other 38 154 -86 1 723 723 108 0 0 chrUextra 18145186 18145306 -10859350 - ARS406_DM Unknown Unknown -233 120 1 1 723 3028 171 8 8 chrUextra 18145213 18145880 -10858776 + SAR_DM Satellite Satellite 195 861 -611 1 723 2653 31 0 0 chrUextra 18145980 18146303 -10858353 + CIRCE LINE Composite 6034 6356 0 1 723 3139 16 0 0 chrUextra 18146303 18146674 -10857982 + CIRCE LINE Composite 1 371 -5985 1 723 2669 191 30 13 chrUextra 18146775 18147465 -10857191 - SAR_DM Satellite Satellite -478 994 293 1 723 5804 3 0 3 chrUextra 18147568 18148262 -10856394 + DMRT1B LINE R1 782 1473 -3710 1 723 553 14 0 0 chrUextra 18148362 18148433 -10856223 + Copia2_I LTR Copia 4092 4162 0 1 723 3608 2 7 0 chrUextra 18148465 18148885 -10855771 + Invader1_LTR LTR Gypsy 1 423 0 1 723 1410 6 6 0 chrUextra 18148885 18149054 -10855602 + Copia2_LTR_DM LTR Copia 29 198 0 1 723 2784 189 26 10 chrUextra 18149156 18149850 -10854806 + SAR_DM Satellite Satellite 279 983 -489 1 723 5625 20 0 1 chrUextra 18149950 18150644 -10854012 - BLOOD_I LTR Gypsy -3448 3165 2473 1 723 5909 7 0 0 chrUextra 18150746 18151438 -10853218 + DMRT1B LINE R1 1662 2353 -2830 1 723 47 0 0 0 chrUextra 18151706 18151753 -10852903 + AT_rich Low_complexity Low_complexity 1 47 0 1 723 3042 215 36 19 chrUextra 18152333 18153796 -10850860 + SAR_DM Satellite Satellite 1 1487 -443 1 723 388 194 9 18 chrUextra 18153710 18153820 -10850836 - XDMR_DM Unknown Unknown 0 360 252 1 723 1170 0 0 0 chrUextra 18153920 18154057 -10850599 - NTS_DM Other Other -103 137 1 1 723 1850 4 17 13 chrUextra 18154057 18154296 -10850360 - NTS_DM Other Other 0 240 1 1 723 1734 21 17 17 chrUextra 18154296 18154536 -10850120 - NTS_DM Other Other 0 240 1 1 723 485 13 51 39 chrUextra 18154536 18154614 -10850042 - NTS_DM Other Other 0 240 162 1 723 5945 10 1 0 chrUextra 18154714 18155408 -10849248 + LSU-rRNA_Dme rRNA rRNA 3149 3843 -57 1 723 5547 30 0 1 chrUextra 18155508 18156202 -10848454 - R1_DM LINE R1 -1767 3589 2897 1 723 2873 25 6 0 chrUextra 18156302 18156660 -10847996 - G2_DM LINE Jockey -24 3078 2719 1 723 24 67 0 0 chrUextra 18156754 18156799 -10847857 + AT_rich Low_complexity Low_complexity 1 45 0 1 723 5906 6 0 1 chrUextra 18157096 18157790 -10846866 + R1_DM LINE R1 4383 5075 -281 1 723 2964 181 9 8 chrUextra 18157890 18158560 -10846096 - SAR_DM Satellite Satellite -556 916 246 1 723 383 109 0 0 chrUextra 18158520 18158584 -10846072 + ARS406_DM Unknown Unknown 1 64 -289 1 723 5022 54 39 0 chrUextra 18158684 18159373 -10845283 - Baggins1 LINE LOA -4574 879 164 1 723 2242 90 6 51 chrUextra 18159478 18160170 -10844486 - DMSAT6 Satellite Satellite -67 660 1 1 723 364 0 0 21 chrUextra 18160272 18160320 -10844336 + R1_DM LINE R1 5310 5356 0 1 723 5673 1 0 0 chrUextra 18160318 18160966 -10843690 + LSU-rRNA_Dme rRNA rRNA 2640 3287 -613 1 723 5787 7 16 4 chrUextra 18161066 18161760 -10842896 - DM1731_I LTR Copia -1798 2178 1477 1 723 2923 185 13 7 chrUextra 18161864 18162541 -10842115 - SAR_DM Satellite Satellite -396 1076 396 1 723 2485 166 13 12 chrUextra 18162666 18163232 -10841424 + SAR_DM Satellite Satellite 1 683 -602 1 723 804 69 9 0 chrUextra 18163232 18163348 -10841308 - ARS406_DM Unknown Unknown -164 189 73 1 723 621 0 0 0 chrUextra 18164242 18164311 -10840345 + (AATAG)n Simple_repeat Simple_repeat 2 70 0 1 723 5625 17 1 4 chrUextra 18165036 18165730 -10838926 - R1_DM LINE R1 -1431 3925 3234 1 723 2408 198 36 28 chrUextra 18165832 18166524 -10838132 - SAR_DM Satellite Satellite -313 1159 462 1 723 1034 103 6 11 chrUextra 18166633 18166809 -10837847 + SAR_DM Satellite Satellite 729 903 -569 1 723 2199 176 6 10 chrUextra 18166824 18167318 -10837338 + SAR_DM Satellite Satellite 496 987 -485 1 723 27 29 0 0 chrUextra 18167625 18167659 -10836997 + AT_rich Low_complexity Low_complexity 1 34 0 1 723 5812 6 1 0 chrUextra 18169006 18169700 -10834956 + Gypsy4_I LTR Gypsy 4968 5662 -626 1 723 898 88 0 29 chrUextra 18169800 18169940 -10834716 - DIVER_LTR LTR Pao -88 136 1 1 723 4580 29 0 0 chrUextra 18169940 18170494 -10834162 - DIVER_I LTR Pao 0 5643 5090 1 723 4529 22 0 52 chrUextra 18170623 18171233 -10833423 + CIRCE LINE Composite 1305 1882 -4474 1 723 2202 176 22 78 chrUextra 18171391 18172082 -10832574 + TART_B1 LINE telomeric 1092 1743 -8911 1 723 5607 12 3 1 chrUextra 18172182 18172849 -10831807 - R1_DM LINE R1 -4687 669 2 1 723 5699 10 25 0 chrUextra 18172976 18173670 -10830986 + Gypsy4_I LTR Gypsy 4663 5373 -915 1 723 376 188 0 0 chrUextra 18173774 18173843 -10830813 + HETRP_DM Satellite Satellite 1601 1669 -203 1 723 733 176 26 20 chrUextra 18173988 18174139 -10830517 + HETRP_DM Satellite Satellite 1518 1669 -203 1 723 1363 130 111 10 chrUextra 18174151 18174439 -10830217 - HOBO DNA hAT 0 3016 2700 1 723 27 62 0 0 chrUextra 18174781 18174829 -10829827 + AT_rich Low_complexity Low_complexity 1 48 0 1 723 225 288 111 22 chrUextra 18174925 18175060 -10829596 + ACCORD2_I LTR Gypsy 526 672 -6540 1 723 3357 48 7 0 chrUextra 18175610 18176052 -10828604 + PROTOP DNA P 74 518 -3962 1 723 6001 1 1 0 chrUextra 18176946 18177640 -10827016 + DMRT1B LINE R1 3387 4081 -1102 1 723 2711 193 13 18 chrUextra 18177740 18178434 -10826222 + SAR_DM Satellite Satellite 1 690 -411 1 723 2656 233 56 12 chrUextra 18178534 18179079 -10825577 - SAR_DM Satellite Satellite -641 1549 954 1 723 411 127 0 0 chrUextra 18179079 18179150 -10825506 + ARS406_DM Unknown Unknown 1 71 -282 1 723 2656 233 56 12 chrUextra 18179150 18180018 -10824638 - SAR_DM Satellite Satellite -641 953 1 1 723 2842 182 26 9 chrUextra 18180124 18180816 -10823840 - SAR_DM Satellite Satellite -486 986 283 1 723 5614 36 0 0 chrUextra 18180916 18181610 -10823046 - R1_DM LINE R1 -1816 3540 2847 1 723 2498 200 13 6 chrUextra 18181712 18182239 -10822417 - HMSBEAGLE_I LTR Gypsy -3577 2952 2422 1 723 899 143 19 0 chrUextra 18182243 18182404 -10822252 - HMSBEAGLE_I LTR Gypsy -4075 2454 2291 1 723 1815 188 5 10 chrUextra 18182506 18182560 -10822096 - SAR_DM Satellite Satellite -416 624 554 1 723 1031 89 0 0 chrUextra 18182560 18182718 -10821938 + ARS406_DM Unknown Unknown 1 158 -195 1 723 1815 188 5 10 chrUextra 18182718 18183134 -10821522 - SAR_DM Satellite Satellite -416 553 1 1 723 455 34 0 0 chrUextra 18183139 18183198 -10821458 + ARS406_DM Unknown Unknown 90 148 -205 1 723 2164 110 29 39 chrUextra 18183298 18183992 -10820664 + DMSAT6 Satellite Satellite 1 686 -92 1 723 577 232 40 35 chrUextra 18184098 18184326 -10820330 + Gypsy12_LTR LTR Gypsy 921 1149 -1187 1 723 1549 181 89 19 chrUextra 18184347 18184786 -10819870 + Gypsy12_LTR LTR Gypsy 1643 2150 -186 1 723 5708 9 1 0 chrUextra 18184886 18185580 -10819076 + DM297_I LTR Gypsy 3227 3921 -2246 1 723 5469 0 0 38 chrUextra 18185680 18186374 -10818282 + LSU-rRNA_Dme rRNA rRNA 183 850 -3050 1 723 3020 184 9 9 chrUextra 18186474 18187166 -10817490 - SAR_DM Satellite Satellite -435 1037 346 1 723 2957 179 12 9 chrUextra 18187278 18187961 -10816695 + SAR_DM Satellite Satellite 195 879 -593 1 723 444 240 19 32 chrUextra 18188070 18188225 -10816431 - QUASIMODO_I LTR Gypsy -381 5679 5527 1 723 2237 54 33 6 chrUextra 18188217 18188551 -10816105 + PROTOP_B DNA P 176 518 -635 1 723 448 50 707 0 chrUextra 18188527 18188713 -10815943 + PROTOP DNA P 541 859 -3621 1 723 278 29 0 0 chrUextra 18188721 18188756 -10815900 - Jockey2 LINE Jockey -1608 1820 1786 1 723 2970 179 12 10 chrUextra 18188856 18189546 -10815110 - SAR_DM Satellite Satellite -515 957 267 1 723 3187 166 10 9 chrUextra 18189650 18190337 -10814319 + SAR_DM Satellite Satellite 369 1056 -416 1 723 610 0 0 0 chrUextra 18190444 18190513 -10814143 + LSU-rRNA_Dme rRNA rRNA 2570 2638 -1262 1 723 4508 0 0 0 chrUextra 18190510 18191027 -10813629 + R1_DM LINE R1 4840 5356 0 1 723 982 9 0 0 chrUextra 18191025 18191138 -10813518 + LSU-rRNA_Dme rRNA rRNA 2640 2752 -1148 1 723 4669 93 32 1 chrUextra 18191240 18191932 -10812724 - Gypsy12_I LTR Gypsy -1780 3766 3054 1 723 770 138 20 7 chrUextra 18192032 18192178 -10812478 + DNAREP1_DM LINE Penelope 89 236 -358 1 723 211 114 0 43 chrUextra 18192229 18192275 -10812381 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 723 5994 9 0 0 chrUextra 18192826 18193520 -10811136 + Copia2_I LTR Copia 3166 3859 -303 1 723 6039 1 1 1 chrUextra 18193620 18194314 -10810342 + LSU-rRNA_Dme rRNA rRNA 2854 3547 -353 1 723 447 35 0 0 chrUextra 18194414 18194471 -10810185 + (TTCTC)n Simple_repeat Simple_repeat 5 61 0 1 723 1407 6 0 0 chrUextra 18194479 18194639 -10810017 + (GAGAA)n Simple_repeat Simple_repeat 1 160 0 1 723 6055 4 0 0 chrUextra 18195208 18195902 -10808754 + Copia2_I LTR Copia 2954 3647 -515 1 723 296 0 0 0 chrUextra 18196796 18196832 -10807824 - LSU-rRNA_Dme rRNA rRNA -3864 36 1 1 723 21 95 0 0 chrUextra 18196844 18196907 -10807749 + AT_rich Low_complexity Low_complexity 1 63 0 1 723 34 24 0 0 chrUextra 18197122 18197163 -10807493 + AT_rich Low_complexity Low_complexity 1 41 0 1 723 2446 3 7 7 chrUextra 18197194 18197489 -10807167 - SSU-rRNA_Dme rRNA rRNA -626 1369 1075 1 723 3066 159 12 31 chrUextra 18198382 18199061 -10805595 - SAR_DM Satellite Satellite -436 1036 371 1 723 2151 93 0 46 chrUextra 18199182 18199531 -10805125 - CIRCE LINE Composite -2365 3991 3659 1 723 2765 24 0 0 chrUextra 18199531 18199867 -10804789 + STALKER4_LTR LTR Gypsy 1 336 -66 1 723 5613 7 0 6 chrUextra 18199968 18200657 -10803999 - STALKER4_I LTR Gypsy -4763 1767 1083 1 723 5792 11 1 0 chrUextra 18200761 18201454 -10803202 + DOC2_DM LINE Jockey 2750 3443 -1350 1 723 1127 310 51 12 chrUextra 18201555 18202224 -10802432 - TOM_I LTR Gypsy -2043 4069 3375 1 723 4374 1 98 0 chrUextra 18202347 18203040 -10801616 - FW_DM LINE Jockey -1046 3646 2886 1 723 5829 16 0 1 chrUextra 18203140 18203833 -10800823 + FW_DM LINE Jockey 3559 4250 -442 1 723 2286 181 12 25 chrUextra 18203939 18204501 -10800155 - SAR_DM Satellite Satellite -382 1090 536 1 723 1013 16 0 0 chrUextra 18204504 18204626 -10800030 + Gypsy6_LTR LTR Gypsy 1 122 -285 1 723 943 9 0 0 chrUextra 18204726 18204838 -10799818 + 5S_DM RNA RNA 24 135 0 1 723 1176 0 0 0 chrUextra 18205062 18205197 -10799459 + 5S_DM RNA RNA 1 135 0 1 723 5934 7 0 0 chrUextra 18205519 18206212 -10798444 - R1_DM LINE R1 -639 4717 4025 1 723 511 123 187 8 chrUextra 18207108 18207231 -10797425 - MDG1_LTR LTR Gypsy -250 192 48 1 723 1566 11 0 0 chrUextra 18207231 18207411 -10797245 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 723 341 30 0 130 chrUextra 18207428 18207505 -10797151 - MDG1_I LTR Gypsy 0 6596 6530 1 723 455 99 52 22 chrUextra 18207533 18207667 -10796989 - MDG1_I LTR Gypsy -64 6532 6395 1 723 893 58 7 0 chrUextra 18207660 18207798 -10796858 - MDG1_I LTR Gypsy -392 6204 6066 1 723 488 119 36 0 chrUextra 18208090 18208174 -10796482 - NTS_DM Other Other -150 90 4 1 723 1301 6 0 18 chrUextra 18208286 18208451 -10796205 - NTS_DM Other Other -78 162 1 1 723 942 7 29 21 chrUextra 18208451 18208591 -10796065 - NTS_DM Other Other 0 240 100 1 723 2320 163 11 9 chrUextra 18208691 18209384 -10795272 - SAR_DM Satellite Satellite -489 694 1 1 723 659 144 0 8 chrUextra 18209484 18209603 -10795053 - DM176_I LTR Gypsy -563 5857 5740 1 723 2082 217 9 10 chrUextra 18209600 18210177 -10794479 - DM297_I LTR Gypsy -1433 4734 4159 1 723 244 128 0 21 chrUextra 18210657 18210705 -10793951 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 723 351 49 65 16 chrUextra 18210727 18210789 -10793867 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 723 692 186 0 14 chrUextra 18210788 18210935 -10793721 - DMLTR5 LTR Gypsy 0 266 122 1 723 4974 42 55 3 chrUextra 18211070 18211763 -10792893 - ROO_I LTR Pao -3188 5068 4340 1 723 21 89 0 0 chrUextra 18212149 18212205 -10792451 + AT_rich Low_complexity Low_complexity 1 56 0 1 723 2770 18 0 3 chrUextra 18212219 18212556 -10792100 + PROTOP_A DNA P 744 1079 -26 1 723 5866 1 3 4 chrUextra 18212656 18213349 -10791307 + LSU-rRNA_Dme rRNA rRNA 781 1472 -2428 1 723 25 0 0 0 chrUextra 18213499 18213524 -10791132 + AT_rich Low_complexity Low_complexity 1 25 0 1 723 2134 174 54 34 chrUextra 18213548 18214102 -10790554 + Stalker2_I LTR Gypsy 291 855 -6547 1 723 283 202 29 39 chrUextra 18214242 18214345 -10790311 + XDMR_DM Unknown Unknown 259 360 0 1 723 2687 189 9 22 chrUextra 18214259 18214935 -10789721 - SAR_DM Satellite Satellite -354 1118 452 1 723 5534 33 1 0 chrUextra 18215035 18215728 -10788928 - MDG1_I LTR Gypsy -2446 4150 3457 1 723 956 183 27 16 chrUextra 18215828 18216521 -10788135 + SAR_DM Satellite Satellite 1 700 -680 1 723 428 0 0 0 chrUextra 18217417 18217466 -10787190 - LSU-rRNA_Dme rRNA rRNA -2064 1836 1788 1 723 4989 2 5 5 chrUextra 18217510 18218107 -10786549 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1192 1 723 5763 3 1 4 chrUextra 18218207 18218900 -10785756 + R1_DM LINE R1 806 1496 -3860 1 90 2983 178 12 7 chrUextra 18219000 18219691 -10784965 - SAR_DM Satellite Satellite -594 878 185 1 724 1668 13 18 18 chrUextra 18219793 18220022 -10784634 + NTS_DM Other Other 12 240 0 1 724 1738 21 17 17 chrUextra 18220022 18220262 -10784394 + NTS_DM Other Other 1 240 0 1 724 1736 9 13 13 chrUextra 18220262 18220486 -10784170 + NTS_DM Other Other 1 224 -16 1 724 5253 51 4 3 chrUextra 18220586 18221279 -10783377 + G2_DM LINE Jockey 172 865 -2237 1 724 5801 3 1 0 chrUextra 18222172 18222839 -10781817 - LSU-rRNA_Dme rRNA rRNA -595 3305 2638 1 724 236 33 0 0 chrUextra 18222835 18222865 -10781791 - R1_DM LINE R1 0 5356 5327 1 724 5690 10 0 0 chrUextra 18222965 18223658 -10780998 + R1_DM LINE R1 370 1062 -4294 1 724 260 0 0 0 chrUextra 18223758 18223789 -10780867 - LSU-rRNA_Dme rRNA rRNA -3869 31 1 1 724 34 24 0 0 chrUextra 18224078 18224119 -10780537 + AT_rich Low_complexity Low_complexity 1 41 0 1 724 1482 201 31 22 chrUextra 18224551 18225244 -10779412 + SAR_DM Satellite Satellite 1 698 -203 1 724 5939 3 0 0 chrUextra 18225347 18226037 -10778619 + R1_DM LINE R1 1264 1953 -3403 1 724 5775 7 6 1 chrUextra 18226137 18226830 -10777826 + DM176_I LTR Gypsy 2763 3458 -2962 1 724 907 23 0 8 chrUextra 18226930 18227060 -10777596 + NTS_DM Other Other 73 201 -39 1 724 21 57 0 0 chrUextra 18227060 18227095 -10777561 + AT_rich Low_complexity Low_complexity 1 35 0 1 724 832 9 9 27 chrUextra 18227121 18227232 -10777424 + NTS_DM Other Other 25 133 -107 1 724 817 0 0 0 chrUextra 18227232 18227328 -10777328 + NTS_DM Other Other 38 133 -107 1 724 1408 20 20 20 chrUextra 18227328 18227531 -10777125 + NTS_DM Other Other 38 240 0 1 724 736 22 11 0 chrUextra 18227531 18227623 -10777033 + NTS_DM Other Other 1 93 -147 1 724 3033 162 19 23 chrUextra 18227723 18228416 -10776240 + SAR_DM Satellite Satellite 411 1100 -372 1 724 210 37 0 0 chrUextra 18228918 18228945 -10775711 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1 724 30 27 0 0 chrUextra 18229062 18229099 -10775557 + AT_rich Low_complexity Low_complexity 1 37 0 1 724 981 108 0 6 chrUextra 18229315 18229482 -10775174 + NTS_DM Other Other 8 173 -67 1 724 267 85 43 0 chrUextra 18229512 18229559 -10775097 + NTS_DM Other Other 1 49 -191 1 724 1108 124 30 22 chrUextra 18229655 18229886 -10774770 + NTS_DM Other Other 8 240 0 1 724 3079 22 5 51 chrUextra 18230102 18230532 -10774124 - CIRCE LINE Composite -966 5390 4981 1 724 2413 92 35 13 chrUextra 18230896 18231583 -10773073 + DMSAT6 Satellite Satellite 1 702 -92 1 724 5408 14 0 0 chrUextra 18231688 18232322 -10772334 + Gypsy2_I LTR Gypsy 1081 1714 -4421 1 724 3133 167 10 9 chrUextra 18232497 18233173 -10771483 + SAR_DM Satellite Satellite 332 1008 -464 1 724 3415 45 117 0 chrUextra 18233274 18233806 -10770850 + PROTOP DNA P 160 753 -3727 1 724 1235 45 11 0 chrUextra 18233776 18233953 -10770703 + PROTOP_A DNA P 588 766 -339 1 724 5244 26 25 1 chrUextra 18234067 18234760 -10769896 + PROTOP DNA P 88 796 -3684 1 724 5604 21 0 17 chrUextra 18234860 18235550 -10769106 - Gypsy12_I LTR Gypsy -4233 1313 636 1 724 2340 108 26 16 chrUextra 18235653 18236341 -10768315 + DMSAT6 Satellite Satellite 1 695 -40 1 724 3003 6 0 0 chrUextra 18236446 18236793 -10767863 + QUASIMODO_LTR LTR Gypsy 312 658 0 1 724 21 0 0 0 chrUextra 18236793 18236814 -10767842 + AT_rich Low_complexity Low_complexity 1 21 0 1 724 551 0 131 6 chrUextra 18236814 18237135 -10767521 + (TA)n Simple_repeat Simple_repeat 1 361 0 1 724 5379 32 1 9 chrUextra 18237239 18237932 -10766724 - BATUMI_I LTR Pao -4443 3520 2833 1 724 1875 4 9 9 chrUextra 18238032 18238265 -10766391 - R1_DM LINE R1 -5123 233 1 1 724 3859 13 2 0 chrUextra 18238265 18238725 -10765931 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2172 1 724 245 125 46 15 chrUextra 18239227 18239292 -10765364 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 724 22 35 0 0 chrUextra 18239486 18239515 -10765141 + AT_rich Low_complexity Low_complexity 1 29 0 1 724 3069 168 9 6 chrUextra 18239622 18240281 -10764375 - SAR_DM Satellite Satellite -620 852 192 1 724 743 104 8 0 chrUextra 18240186 18240311 -10764345 + ARS406_DM Unknown Unknown 1 126 -227 1 724 5998 0 1 0 chrUextra 18240411 18241104 -10763552 - G_DM LINE Jockey -2712 1634 941 1 724 2171 104 26 34 chrUextra 18241210 18241897 -10762759 - DMSAT6 Satellite Satellite -3 681 1 1 724 2739 198 15 20 chrUextra 18241997 18242690 -10761966 - SAR_DM Satellite Satellite -652 689 1 1 724 22 35 0 0 chrUextra 18242883 18242912 -10761744 + AT_rich Low_complexity Low_complexity 1 29 0 1 724 4614 11 0 0 chrUextra 18242946 18243483 -10761173 + Copia2_I LTR Copia 3117 3653 -509 1 724 754 289 10 10 chrUextra 18244396 18244704 -10759952 - MDG3_I LTR Gypsy -1347 3639 3332 1 724 428 272 32 32 chrUextra 18244869 18245055 -10759601 - Invader3_I LTR Gypsy -1678 3210 3025 1 724 1123 18 23 23 chrUextra 18245169 18245341 -10759315 + NTS_DM Other Other 69 240 0 1 724 1744 21 17 17 chrUextra 18245341 18245581 -10759075 + NTS_DM Other Other 1 240 0 1 724 1726 17 17 21 chrUextra 18245581 18245822 -10758834 + NTS_DM Other Other 1 240 0 1 724 332 25 0 0 chrUextra 18245822 18245862 -10758794 + NTS_DM Other Other 1 40 -200 1 724 5964 1 3 1 chrUextra 18245962 18246655 -10758001 - SSU-rRNA_Dme rRNA rRNA -743 1252 559 1 724 1795 5 0 5 chrUextra 18246757 18246969 -10757687 + NOMAD_LTR LTR Gypsy 308 518 0 1 724 551 0 127 10 chrUextra 18246974 18247443 -10757213 + (TA)n Simple_repeat Simple_repeat 1 523 0 1 724 5537 17 42 1 chrUextra 18247548 18248241 -10756415 - R1_DM LINE R1 -868 4488 3768 1 724 5603 14 19 0 chrUextra 18248341 18249034 -10755622 + DOC2_DM LINE Jockey 1237 1942 -2851 1 724 5913 6 0 0 chrUextra 18249136 18249827 -10754829 + R1_DM LINE R1 4575 5265 -91 1 724 5193 48 0 6 chrUextra 18249927 18250620 -10754036 + R1_DM LINE R1 206 894 -4462 1 724 2438 7 0 0 chrUextra 18252306 18252605 -10752051 + DM176_I LTR Gypsy 6122 6420 0 1 724 2178 14 0 78 chrUextra 18252605 18252912 -10751744 + DM176_LTR LTR Gypsy 1 283 -224 1 724 639 23 47 0 chrUextra 18252913 18252999 -10751657 + DM176_LTR LTR Gypsy 251 340 -167 1 724 1367 199 0 0 chrUextra 18253099 18253390 -10751266 - STALKER4_I LTR Gypsy -6005 525 235 1 724 31 58 0 0 chrUextra 18253391 18253443 -10751213 + AT_rich Low_complexity Low_complexity 1 52 0 1 724 1662 73 3 33 chrUextra 18253531 18253792 -10750864 - STALKER4_LTR LTR Gypsy -3 399 151 1 724 2886 179 9 13 chrUextra 18253895 18254585 -10750071 + SAR_DM Satellite Satellite 282 968 -504 1 724 1863 51 17 42 chrUextra 18254685 18254972 -10749684 - Gypsy12_I LTR Gypsy -5266 280 1 1 724 2235 128 10 20 chrUextra 18254972 18255377 -10749279 - Gypsy12A_LTR LTR Gypsy 0 2280 1880 1 724 5507 13 17 1 chrUextra 18255478 18256171 -10748485 - Invader2_I LTR Gypsy -3726 866 163 1 724 2465 108 18 13 chrUextra 18256272 18256954 -10747702 - DMSAT6 Satellite Satellite -23 685 1 1 724 5893 3 0 1 chrUextra 18257064 18257757 -10746899 + ROO_I LTR Pao 1030 1721 -6535 1 724 5610 23 22 0 chrUextra 18257857 18258548 -10746108 - R1_DM LINE R1 -1602 3754 3049 1 724 2869 171 25 27 chrUextra 18259443 18260136 -10744520 + SAR_DM Satellite Satellite 413 1103 -369 1 724 5976 1 3 0 chrUextra 18260236 18260929 -10743727 + DIVER_I LTR Pao 205 899 -4744 1 724 5926 9 1 0 chrUextra 18261029 18261722 -10742934 + Gypsy4_I LTR Gypsy 2689 3382 -2906 1 724 2431 53 44 0 chrUextra 18262173 18262515 -10742141 - DOC3_DM LINE Jockey -3291 1449 1093 1 724 2245 45 0 0 chrUextra 18262615 18262901 -10741755 - PROTOP_A DNA P -819 286 1 1 724 2763 87 0 5 chrUextra 18262901 18263306 -10741350 - S_DM DNA Tc1 -747 989 587 1 724 2194 190 41 3 chrUextra 18264201 18264894 -10739762 + SAR_DM Satellite Satellite 1 719 -524 1 724 2260 77 4 49 chrUextra 18264994 18265685 -10738971 + DMSAT6 Satellite Satellite 1 659 -69 1 724 5735 9 0 0 chrUextra 18265787 18266480 -10738176 + IDEFIX_I LTR Gypsy 492 1184 -4444 1 724 5790 19 1 0 chrUextra 18266583 18267273 -10737383 + Gypsy4_I LTR Gypsy 5358 6048 -240 1 724 5557 11 3 0 chrUextra 18267373 18268066 -10736590 - PROTOP_A DNA P -163 942 248 1 724 367 106 15 0 chrUextra 18268166 18268232 -10736424 - ARS406_DM Unknown Unknown -286 67 1 1 724 3002 179 5 6 chrUextra 18268192 18268851 -10735805 + SAR_DM Satellite Satellite 246 903 -569 1 724 5805 23 0 0 chrUextra 18268959 18269652 -10735004 - R1_DM LINE R1 -592 4764 4072 1 724 643 13 0 0 chrUextra 18269752 18269828 -10734828 + PROTOP_A DNA P 80 155 -950 1 724 4419 82 3 13 chrUextra 18269826 18270445 -10734211 + Gypsy12_I LTR Gypsy 4657 5269 -277 1 724 2773 185 9 22 chrUextra 18270548 18271238 -10733418 - SAR_DM Satellite Satellite -354 1118 438 1 724 5377 40 13 1 chrUextra 18271338 18272031 -10732625 + R1_DM LINE R1 1168 1868 -3488 1 724 2671 0 0 0 chrUextra 18272131 18272434 -10732222 + LSU-rRNA_Dme rRNA rRNA 2350 2652 -1248 1 724 3076 6 6 0 chrUextra 18272463 18272824 -10731832 + R1_DM LINE R1 1 363 -4993 1 724 5893 17 0 0 chrUextra 18272924 18273617 -10731039 + MAX_I LTR Pao 6110 6802 -1112 1 724 1600 178 61 58 chrUextra 18273717 18274374 -10730282 + HETA LINE telomeric 19 677 -5404 1 724 4276 102 66 13 chrUextra 18274510 18275203 -10729453 - Gypsy12_I LTR Gypsy -3639 1907 1178 1 724 1681 175 3 6 chrUextra 18275303 18275665 -10728991 - SAR_DM Satellite Satellite -616 856 496 1 724 1604 150 6 6 chrUextra 18275680 18275995 -10728661 - SAR_DM Satellite Satellite -569 903 589 1 724 5971 1 0 0 chrUextra 18276096 18276789 -10727867 + LSU-rRNA_Dme rRNA rRNA 583 1275 -2625 1 724 247 271 103 51 chrUextra 18277764 18277978 -10726678 + Invader2_I LTR Gypsy 2112 2336 -2256 1 724 295 123 35 0 chrUextra 18278318 18278375 -10726281 + DMCR1A LINE CR1 86 144 -4326 1 724 5936 0 0 1 chrUextra 18278475 18279168 -10725488 + ROO_I LTR Pao 1048 1739 -6517 1 724 262 106 0 21 chrUextra 18279368 18279416 -10725240 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 724 351 49 65 16 chrUextra 18279438 18279500 -10725156 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 724 873 178 102 15 chrUextra 18279499 18279704 -10724952 - DMLTR5 LTR Gypsy 0 266 44 1 724 27 29 0 0 chrUextra 18280110 18280144 -10724512 + AT_rich Low_complexity Low_complexity 1 34 0 1 724 22 56 0 0 chrUextra 18280208 18280244 -10724412 + AT_rich Low_complexity Low_complexity 1 36 0 1 724 27 29 0 0 chrUextra 18280308 18280342 -10724314 + AT_rich Low_complexity Low_complexity 1 34 0 1 724 246 150 0 0 chrUextra 18280347 18280387 -10724269 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18280538 18280578 -10724078 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 255 125 0 0 chrUextra 18280621 18280661 -10723995 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 22 56 0 0 chrUextra 18280674 18280710 -10723946 + AT_rich Low_complexity Low_complexity 1 36 0 1 724 4829 99 0 0 chrUextra 18280867 18281546 -10723110 - Gypsy12_I LTR Gypsy -2121 3425 2747 1 724 2889 180 14 22 chrUextra 18281647 18282340 -10722316 + SAR_DM Satellite Satellite 413 1100 -372 1 724 356 52 35 0 chrUextra 18282440 18282498 -10722158 - SAR_DM Satellite Satellite -673 799 740 1 724 3411 34 39 2 chrUextra 18282511 18283133 -10721523 + DOC2_DM LINE Jockey 10 686 -4107 1 724 5486 38 1 4 chrUextra 18283233 18283926 -10720730 + MAX_I LTR Pao 2563 3253 -4661 1 724 2627 136 23 65 chrUextra 18284026 18284584 -10720072 + Gypsy12_LTR LTR Gypsy 1802 2336 0 1 724 756 57 31 31 chrUextra 18284584 18284711 -10719945 + Gypsy12_I LTR Gypsy 1 127 -5419 1 724 5973 0 0 0 chrUextra 18284819 18285512 -10719144 - DOC LINE Jockey -2965 1760 1068 1 724 3049 183 6 6 chrUextra 18285612 18286299 -10718357 + SAR_DM Satellite Satellite 389 1075 -397 1 724 324 200 0 0 chrUextra 18286405 18286500 -10718156 + (CATAA)n Simple_repeat Simple_repeat 2 96 0 1 724 246 150 0 0 chrUextra 18287277 18287317 -10717339 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287369 18287409 -10717247 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287461 18287501 -10717155 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287553 18287593 -10717063 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287645 18287685 -10716971 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287737 18287777 -10716879 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 228 150 0 0 chrUextra 18287820 18287860 -10716796 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 2965 53 31 12 chrUextra 18287991 18288408 -10716248 - G2_DM LINE Jockey -124 2978 2554 1 724 968 44 0 0 chrUextra 18288400 18288535 -10716121 + G2_DM LINE Jockey 2934 3068 -34 1 724 4998 2 0 2 chrUextra 18288904 18289477 -10715179 + SSU-rRNA_Dme rRNA rRNA 1 572 -1423 1 724 5518 22 3 0 chrUextra 18289577 18290270 -10714386 + QUASIMODO_I LTR Gypsy 2872 3566 -2494 1 724 5980 3 0 0 chrUextra 18290370 18291063 -10713593 + R1_DM LINE R1 3080 3772 -1584 1 724 3481 84 69 92 chrUextra 18291203 18291856 -10712800 - Invader1_I LTR Gypsy 0 3186 2549 1 724 5460 33 4 4 chrUextra 18291956 18292649 -10712007 + R1_DM LINE R1 1340 2032 -3324 1 724 554 0 0 15 chrUextra 18293375 18293442 -10711214 + (TCTTG)n Simple_repeat Simple_repeat 1 66 0 1 724 3075 165 13 10 chrUextra 18293544 18294230 -10710426 - SAR_DM Satellite Satellite -416 1056 369 1 724 5961 1 1 3 chrUextra 18294335 18295028 -10709628 + SSU-rRNA_Dme rRNA rRNA 508 1199 -796 1 724 2588 114 127 6 chrUextra 18295130 18295748 -10708908 - TART LINE telomeric -6799 7678 7159 1 724 418 94 16 0 chrUextra 18295757 18295821 -10708835 - TART LINE telomeric -7457 7020 6956 1 724 3086 159 9 9 chrUextra 18295924 18296572 -10708084 + SAR_DM Satellite Satellite 346 993 -479 1 724 2717 197 7 17 chrUextra 18296715 18297407 -10707249 - SAR_DM Satellite Satellite -361 1111 427 1 724 1176 0 0 0 chrUextra 18297511 18297646 -10707010 - 5S_DM RNA RNA 0 135 1 1 724 1067 15 0 62 chrUextra 18297870 18298014 -10706642 - 5S_DM RNA RNA 0 135 1 1 724 2945 176 10 12 chrUextra 18299102 18299786 -10704870 - SAR_DM Satellite Satellite -416 1056 374 1 724 5841 14 0 0 chrUextra 18299886 18300579 -10704077 - Invader3_I LTR Gypsy -811 4077 3385 1 724 5789 19 0 0 chrUextra 18300679 18301372 -10703284 + DM1731_I LTR Copia 2833 3525 -451 1 724 1356 23 0 6 chrUextra 18301472 18301648 -10703008 - NTS_DM Other Other -65 175 1 1 724 1710 13 17 17 chrUextra 18301648 18301880 -10702776 - NTS_DM Other Other 0 240 9 1 724 34 24 0 0 chrUextra 18302526 18302567 -10702089 + AT_rich Low_complexity Low_complexity 1 41 0 1 724 21 95 0 0 chrUextra 18302782 18302845 -10701811 + AT_rich Low_complexity Low_complexity 1 63 0 1 724 880 0 0 0 chrUextra 18302857 18302958 -10701698 + LSU-rRNA_Dme rRNA rRNA 1 101 -3799 1 724 4224 45 53 46 chrUextra 18303058 18303751 -10700905 - PROTOP_A DNA P -156 949 252 1 724 3143 158 13 14 chrUextra 18303851 18304544 -10700112 - SAR_DM Satellite Satellite -435 1037 346 1 724 5361 48 1 1 chrUextra 18304644 18305337 -10699319 - R1_DM LINE R1 -3568 1788 1096 1 724 4527 0 0 0 chrUextra 18305465 18305983 -10698673 - NOMAD_LTR LTR Gypsy 0 518 1 1 724 945 122 0 0 chrUextra 18305983 18306130 -10698526 + (TATG)n Simple_repeat Simple_repeat 4 150 0 1 724 5856 1 1 0 chrUextra 18306230 18306921 -10697735 - MDG3_I LTR Gypsy -2345 2641 1950 1 724 2551 163 7 6 chrUextra 18307024 18307716 -10696940 + SAR_DM Satellite Satellite 1 692 -500 1 724 3800 36 34 0 chrUextra 18307816 18308494 -10696162 - DOC2_DM LINE Jockey -4052 741 6 1 724 2654 226 48 27 chrUextra 18308609 18310095 -10694561 - SAR_DM Satellite Satellite -398 1517 1 1 724 3188 105 4 40 chrUextra 18310195 18310888 -10693768 + Gypsy12_I LTR Gypsy 376 1101 -4445 1 724 5960 3 0 1 chrUextra 18311781 18312474 -10692182 + FW_DM LINE Jockey 1903 2594 -2098 1 724 5893 6 17 0 chrUextra 18312574 18313267 -10691389 + Invader1_I LTR Gypsy 1212 1916 -1270 1 724 2763 157 14 38 chrUextra 18313371 18314007 -10690649 - SAR_DM Satellite Satellite -483 989 369 1 724 521 284 39 29 chrUextra 18313739 18314051 -10690605 + XDMR_DM Unknown Unknown 46 360 0 1 724 233 204 0 0 chrUextra 18314160 18314214 -10690442 + XDMR Unknown Unknown 308 361 0 1 724 2839 183 9 19 chrUextra 18314168 18314853 -10689803 - SAR_DM Satellite Satellite -361 1111 434 1 724 5164 34 40 10 chrUextra 18314953 18315646 -10689010 + ROO_I LTR Pao 4247 4960 -3296 1 724 5785 19 0 0 chrUextra 18315749 18316439 -10688217 - ROO_I LTR Pao -5367 2889 2200 1 724 4113 77 33 39 chrUextra 18316539 18317232 -10687424 - Gypsy10_I LTR Gypsy -4338 940 252 1 724 2576 77 121 2 chrUextra 18317332 18317904 -10686752 + Gypsy12_I LTR Gypsy 4907 5546 0 1 724 521 181 8 49 chrUextra 18317903 18318025 -10686631 + Gypsy12_LTR LTR Gypsy 1 117 -2219 1 724 5321 22 1 6 chrUextra 18318125 18318818 -10685838 - IDEFIX_I LTR Gypsy -1648 3980 3291 1 724 322 178 50 101 chrUextra 18318989 18319108 -10685548 + Copia_I LTR Copia 4401 4513 -80 1 724 1985 8 0 0 chrUextra 18319847 18320087 -10684569 - ALUII_DM Unknown Unknown 0 240 1 1 724 21 57 0 0 chrUextra 18320087 18320122 -10684534 + AT_rich Low_complexity Low_complexity 1 35 0 1 724 22 35 0 0 chrUextra 18320319 18320348 -10684308 + AT_rich Low_complexity Low_complexity 1 29 0 1 724 21 89 0 0 chrUextra 18321688 18321744 -10682912 + AT_rich Low_complexity Low_complexity 1 56 0 1 724 1888 0 0 13 chrUextra 18321763 18321990 -10682666 - SSU-rRNA_Dme rRNA rRNA 0 1995 1772 1 724 2225 11 0 4 chrUextra 18322090 18322353 -10682303 + MAX_I LTR Pao 3729 3990 -3924 1 724 3367 47 0 0 chrUextra 18322351 18322780 -10681876 + MAX_I LTR Pao 5382 5810 -2104 1 724 5496 3 0 5 chrUextra 18322923 18323576 -10681080 - DOC LINE Jockey 0 4725 4076 1 724 5898 0 0 1 chrUextra 18323676 18324369 -10680287 - LSU-rRNA_Dme rRNA rRNA -2757 1143 452 1 724 528 108 81 0 chrUextra 18324626 18324737 -10679919 + TART LINE telomeric 10370 10489 -3988 1 724 34 24 0 0 chrUextra 18324750 18324791 -10679865 + AT_rich Low_complexity Low_complexity 1 41 0 1 724 5934 4 0 0 chrUextra 18325262 18325955 -10678701 - R1_DM LINE R1 -1720 3636 2944 1 724 2911 54 118 15 chrUextra 18326056 18326580 -10678076 + FW3_DM LINE Jockey 722 1299 -1833 1 724 1293 24 12 0 chrUextra 18326580 18326748 -10677908 + TC1_DM DNA Tc1 1 170 -1496 1 724 1581 170 11 10 chrUextra 18326848 18327539 -10677117 + SAR_DM Satellite Satellite 1 691 -677 1 724 2742 178 17 25 chrUextra 18327641 18328334 -10676322 - SAR_DM Satellite Satellite -356 1116 429 1 724 2064 0 4 0 chrUextra 18328434 18328675 -10675981 - FW_DM LINE Jockey -1137 3555 3314 1 724 1404 108 0 9 chrUextra 18328706 18328921 -10675735 - BS2 LINE Jockey -4259 462 250 1 724 360 274 20 0 chrUextra 18328932 18329034 -10675622 - GTWIN_I LTR Gypsy -4772 1649 1546 1 724 1005 17 0 0 chrUextra 18329231 18329350 -10675306 + (CTTAT)n Simple_repeat Simple_repeat 3 121 0 1 724 709 0 0 0 chrUextra 18330020 18330102 -10674554 - ROO_LTR LTR Pao -346 82 1 1 724 5225 7 2 0 chrUextra 18330102 18330713 -10673943 - R1_DM LINE R1 -431 4925 4314 1 724 5062 16 3 0 chrUextra 18330813 18331420 -10673236 - R1_DM LINE R1 -4747 609 1 1 724 616 0 0 0 chrUextra 18331436 18331506 -10673150 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2582 1 724 402 21 0 0 chrUextra 18331606 18331653 -10673003 + (TTCTC)n Simple_repeat Simple_repeat 4 50 0 1 724 269 43 255 0 chrUextra 18332399 18332446 -10672210 - BATUMI_I LTR Pao -6510 1453 1395 1 724 3043 111 17 41 chrUextra 18332467 18333050 -10671606 - BATUMI_I LTR Pao -6646 1317 749 1 724 1903 186 62 13 chrUextra 18333194 18333883 -10670773 - SAR_DM Satellite Satellite -670 722 1 1 724 449 303 8 2 chrUextra 18334498 18334677 -10669979 - Gypsy5_I LTR Gypsy -3597 2912 2749 1 724 2393 85 25 22 chrUextra 18334778 18335471 -10669185 - DMSAT6 Satellite Satellite -38 695 1 1 724 3351 63 44 35 chrUextra 18335571 18336263 -10668393 + PROTOP_A DNA P 461 1105 -48 1 724 5874 12 0 0 chrUextra 18336363 18337055 -10667601 + Gypsy4_I LTR Gypsy 1105 1796 -4492 1 724 5990 0 1 1 chrUextra 18337158 18337847 -10666809 - SSU-rRNA_Dme rRNA rRNA 0 1995 1307 1 724 2539 184 61 21 chrUextra 18337955 18338639 -10666017 + SAR_DM Satellite Satellite 1 711 -216 1 724 339 223 0 19 chrUextra 18338740 18338845 -10665811 + XDMR_DM Unknown Unknown 258 360 0 1 724 2637 189 7 22 chrUextra 18338759 18339431 -10665225 - SAR_DM Satellite Satellite -354 1118 457 1 724 626 139 16 0 chrUextra 18339531 18339653 -10665003 - ARS406_DM Unknown Unknown -229 124 1 1 724 2737 183 12 9 chrUextra 18339560 18340222 -10664434 + SAR_DM Satellite Satellite 195 858 -614 1 724 4612 9 35 2 chrUextra 18340339 18340914 -10663742 + IDEFIX_LTR LTR Gypsy 1 594 0 1 724 5649 0 1 1 chrUextra 18341159 18341807 -10662849 - LSU-rRNA_Dme rRNA rRNA 0 3900 3253 1 724 5936 0 0 1 chrUextra 18341907 18342599 -10662057 - LSU-rRNA_Dme rRNA rRNA -2653 1247 557 1 724 5891 1 0 0 chrUextra 18342699 18343391 -10661265 - ROO_I LTR Pao -3973 4283 3592 1 724 5849 3 4 3 chrUextra 18343491 18344183 -10660473 + LSU-rRNA_Dme rRNA rRNA 1028 1720 -2180 1 724 6001 4 1 0 chrUextra 18344283 18344975 -10659681 - LSU-rRNA_Dme rRNA rRNA -59 3841 3149 1 724 5841 0 1 1 chrUextra 18345075 18345767 -10658889 - R1_DM LINE R1 -3905 1451 760 1 724 2622 203 12 7 chrUextra 18345867 18346552 -10658104 + SAR_DM Satellite Satellite 389 1076 -396 1 724 3475 53 57 40 chrUextra 18346659 18347351 -10657305 + DM176_I LTR Gypsy 274 911 -5509 1 724 4970 93 0 0 chrUextra 18347451 18348142 -10656514 - HMSBEAGLE_I LTR Gypsy -1982 4547 3857 1 724 28 48 0 0 chrUextra 18348330 18348372 -10656284 + AT_rich Low_complexity Low_complexity 1 42 0 1 724 32 0 0 0 chrUextra 18348700 18348732 -10655924 + AT_rich Low_complexity Low_complexity 1 32 0 1 724 601 14 0 0 chrUextra 18348864 18348935 -10655721 + SSU-rRNA_Dme rRNA rRNA 1 71 -1924 1 724 2264 183 28 7 chrUextra 18349035 18349725 -10654931 - SAR_DM Satellite Satellite -711 704 1 1 90 5709 16 1 1 chrUextra 18349827 18350519 -10654137 + R1_DM LINE R1 3547 4238 -1118 1 725 2349 168 11 11 chrUextra 18350628 18351151 -10653505 + SAR_DM Satellite Satellite 369 891 -581 1 725 1146 52 7 0 chrUextra 18351157 18351311 -10653345 - Gypsy6A_LTR LTR Gypsy 0 420 266 1 725 5937 10 1 0 chrUextra 18351411 18352103 -10652553 + Gypsy6_I LTR Gypsy 789 1481 -5531 1 725 5728 6 1 1 chrUextra 18352207 18352895 -10651761 - R1_DM LINE R1 -3951 1405 718 1 725 5257 9 1 40 chrUextra 18352995 18353687 -10650969 - LSU-rRNA_Dme rRNA rRNA -3118 782 118 1 725 783 116 78 123 chrUextra 18353787 18353941 -10650715 + Gypsy12A_LTR LTR Gypsy 2125 2313 -23 1 725 738 178 199 55 chrUextra 18353931 18354347 -10650309 + TART LINE telomeric 10015 10489 -3988 1 725 5833 15 0 4 chrUextra 18354581 18355271 -10649385 - BATUMI_I LTR Pao -1920 6043 5357 1 725 328 0 22 0 chrUextra 18355371 18355417 -10649239 + FW_DM LINE Jockey 1356 1402 -3290 1 725 5514 1 0 0 chrUextra 18355416 18356063 -10648593 + DOC LINE Jockey 471 1117 -3608 1 725 28 48 0 0 chrUextra 18356377 18356419 -10648237 + AT_rich Low_complexity Low_complexity 1 42 0 1 725 32 0 0 0 chrUextra 18356747 18356779 -10647877 + AT_rich Low_complexity Low_complexity 1 32 0 1 725 2464 91 46 6 chrUextra 18356974 18357646 -10647010 + DMSAT6 Satellite Satellite 1 699 0 1 725 5496 4 0 0 chrUextra 18358547 18359231 -10645425 + DM176_I LTR Gypsy 5444 6127 -293 1 725 5423 10 3 0 chrUextra 18359331 18360023 -10644633 + DM176_I LTR Gypsy 5375 6068 -352 1 725 2668 197 18 25 chrUextra 18360123 18360815 -10643841 - SAR_DM Satellite Satellite -638 686 1 1 725 4648 40 64 9 chrUextra 18360917 18361573 -10643083 - PROTOP DNA P -3788 692 1 1 725 697 193 0 7 chrUextra 18362620 18362766 -10641890 + DMLTR5 LTR Gypsy 122 266 0 1 725 351 85 661 14 chrUextra 18362765 18362897 -10641759 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 1 725 244 128 0 21 chrUextra 18363127 18363175 -10641481 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 725 1966 211 69 15 chrUextra 18364098 18364775 -10639881 - SAR_DM Satellite Satellite -397 713 1 1 725 2058 0 0 0 chrUextra 18364875 18365108 -10639548 - Invader1_I LTR Gypsy -2953 233 1 1 725 3622 7 2 0 chrUextra 18365108 18365530 -10639126 - Invader1_LTR LTR Gypsy 0 423 1 1 725 2649 200 25 10 chrUextra 18365667 18366359 -10638297 + SAR_DM Satellite Satellite 256 957 -515 1 725 535 159 0 17 chrUextra 18366459 18366574 -10638082 - R1_DM LINE R1 -4670 686 574 1 725 982 102 29 29 chrUextra 18366575 18366747 -10637909 - R1_DM LINE R1 -5184 172 1 1 725 1941 68 3 35 chrUextra 18366765 18367054 -10637602 + Gypsy6A_LTR LTR Gypsy 71 350 -70 1 725 630 83 0 0 chrUextra 18367053 18367149 -10637507 - Stalker2_I LTR Gypsy -4238 3164 3069 1 725 5709 0 3 3 chrUextra 18367251 18367943 -10636713 + STALKER4_I LTR Gypsy 1144 1835 -4695 1 725 3816 12 123 0 chrUextra 18368043 18368530 -10636126 + R1_DM LINE R1 4810 5356 0 1 725 1200 87 11 0 chrUextra 18368551 18368735 -10635921 + R1_DM LINE R1 23 208 -5148 1 725 2597 185 52 7 chrUextra 18368836 18369527 -10635129 - SAR_DM Satellite Satellite -546 926 205 1 725 2152 171 88 4 chrUextra 18369701 18370154 -10634502 - FW_DM LINE Jockey -3176 1516 1026 1 725 1245 55 6 0 chrUextra 18370154 18370319 -10634337 + FB4_DM DNA Tc1 1 166 -3923 1 725 2023 198 8 19 chrUextra 18370420 18370900 -10633756 - DM297_I LTR Gypsy -5042 1125 651 1 725 801 0 0 0 chrUextra 18371211 18371311 -10633345 + LSU-rRNA_Dme rRNA rRNA 426 525 -3375 1 725 5131 5 0 0 chrUextra 18371307 18371903 -10632753 + LSU-rRNA_Dme rRNA rRNA 676 1271 -2629 1 725 5731 28 0 0 chrUextra 18372003 18372695 -10631961 + DIVER_I LTR Pao 1944 2635 -3008 1 725 2013 171 11 6 chrUextra 18372795 18373486 -10631170 + SAR_DM Satellite Satellite 1 694 -677 1 725 2553 0 0 0 chrUextra 18373587 18373917 -10630739 + HMSBEAGLE_I LTR Gypsy 458 787 -5742 1 725 677 33 49 16 chrUextra 18373933 18374055 -10630601 + (TTA)n Simple_repeat Simple_repeat 3 128 0 1 725 1797 5 0 0 chrUextra 18374055 18374279 -10630377 + HMSBEAGLE_I LTR Gypsy 976 1199 -5330 1 725 824 25 0 8 chrUextra 18374379 18374501 -10630155 + NTS_DM Other Other 81 201 -39 1 725 870 9 0 27 chrUextra 18374553 18374665 -10629991 + NTS_DM Other Other 25 133 -107 1 725 1252 18 0 6 chrUextra 18374665 18374830 -10629826 + NTS_DM Other Other 38 201 -39 1 725 21 57 0 0 chrUextra 18374830 18374865 -10629791 + AT_rich Low_complexity Low_complexity 1 35 0 1 725 802 9 9 36 chrUextra 18374891 18375003 -10629653 + NTS_DM Other Other 25 133 -107 1 725 542 29 0 0 chrUextra 18375003 18375071 -10629585 + NTS_DM Other Other 38 105 -135 1 725 2271 92 1 69 chrUextra 18375177 18375863 -10628793 + DMSAT6 Satellite Satellite 1 639 -82 1 725 2261 62 0 75 chrUextra 18375967 18376313 -10628343 + CIRCE LINE Composite 973 1292 -5064 1 725 543 335 22 22 chrUextra 18376225 18376536 -10628120 + Gypsy12_I LTR Gypsy 3059 3369 -2177 1 725 1821 20 0 80 chrUextra 18376379 18376643 -10628013 + CIRCE LINE Composite 1305 1547 -4809 1 725 25 31 0 0 chrUextra 18377415 18377447 -10627209 + AT_rich Low_complexity Low_complexity 1 32 0 1 725 5077 32 12 4 chrUextra 18377547 18378239 -10626417 + PROTOP_A DNA P 235 931 -174 1 725 696 243 107 11 chrUextra 18378396 18378667 -10625989 - BS LINE Jockey -1688 3438 3142 1 725 323 334 41 56 chrUextra 18379231 18379627 -10625029 - Gypsy6_I LTR Gypsy -5228 1784 1344 1 725 5494 26 29 0 chrUextra 18379923 18380615 -10624041 + FW_DM LINE Jockey 3171 3882 -810 1 725 300 132 12 24 chrUextra 18380770 18380855 -10623801 + A-rich Low_complexity Low_complexity 1 84 0 1 725 1931 48 8 0 chrUextra 18381158 18381407 -10623249 - DMRT1A LINE R1 -12 5171 4921 1 725 5600 29 0 0 chrUextra 18381507 18382199 -10622457 + R1_DM LINE R1 2715 3406 -1950 1 725 5712 13 0 19 chrUextra 18382299 18382991 -10621665 - Gypsy6_I LTR Gypsy -1019 5993 5315 1 725 4989 21 0 2 chrUextra 18383174 18383783 -10620873 - DOC2_DM LINE Jockey -1 4792 4185 1 725 5920 7 0 0 chrUextra 18383883 18384575 -10620081 - DOC2_DM LINE Jockey -1049 3744 3053 1 725 5205 0 3 69 chrUextra 18384675 18385367 -10619289 - LSU-rRNA_Dme rRNA rRNA -1947 1953 1308 1 725 322 178 50 101 chrUextra 18385584 18385703 -10618953 - Copia_I LTR Copia -80 4513 4401 1 725 22 56 0 0 chrUextra 18385748 18385784 -10618872 + AT_rich Low_complexity Low_complexity 1 36 0 1 725 961 192 68 9 chrUextra 18385938 18386159 -10618497 + HETA LINE telomeric 4031 4264 -1817 1 725 5535 0 0 1 chrUextra 18386294 18386951 -10617705 + LSU-rRNA_Dme rRNA rRNA 218 873 -3027 1 725 2203 179 6 10 chrUextra 18387051 18387529 -10617127 + SAR_DM Satellite Satellite 1 614 -641 1 725 992 101 0 0 chrUextra 18387529 18387687 -10616969 - ARS406_DM Unknown Unknown -195 158 1 1 725 2203 179 6 10 chrUextra 18387687 18387741 -10616915 + SAR_DM Satellite Satellite 615 686 -569 1 725 21 89 0 0 chrUextra 18388240 18388296 -10616360 + AT_rich Low_complexity Low_complexity 1 56 0 1 725 1915 5 0 0 chrUextra 18388315 18388535 -10616121 - SSU-rRNA_Dme rRNA rRNA 0 1995 1776 1 725 2356 92 12 22 chrUextra 18388641 18389327 -10615329 + DMSAT6 Satellite Satellite 1 678 -151 1 725 5802 4 1 1 chrUextra 18390219 18390911 -10613745 - G_DM LINE Jockey -2037 2309 1618 1 725 2344 144 7 0 chrUextra 18391011 18391415 -10613241 + HMSBEAGLE_I LTR Gypsy 2048 2454 -4075 1 725 1311 196 25 11 chrUextra 18391419 18391703 -10612953 + HMSBEAGLE_I LTR Gypsy 2422 2709 -3820 1 725 5779 10 0 0 chrUextra 18391803 18392495 -10612161 - Invader2_I LTR Gypsy -528 4064 3373 1 725 4979 30 26 4 chrUextra 18392595 18393287 -10611369 - PROTOP DNA P -3470 1010 304 1 725 5252 0 0 0 chrUextra 18393387 18393982 -10610674 - Invader6_I LTR Gypsy -3504 595 1 1 725 806 0 0 0 chrUextra 18393982 18394079 -10610577 - Invader6_LTR LTR Gypsy 0 393 297 1 725 5851 16 1 1 chrUextra 18394179 18394871 -10609785 - Gypsy12_I LTR Gypsy -762 4784 4093 1 725 5820 14 0 0 chrUextra 18394971 18395663 -10608993 - DMRT1B LINE R1 -1559 3624 2933 1 725 990 182 33 14 chrUextra 18395763 18396455 -10608201 - SAR_DM Satellite Satellite -686 704 1 1 725 6006 1 0 1 chrUextra 18396555 18397247 -10607409 + SSU-rRNA_Dme rRNA rRNA 473 1163 -832 1 725 192 40 0 0 chrUextra 18397372 18397397 -10607259 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 725 491 208 8 16 chrUextra 18397397 18397519 -10607137 + HETRP_DM Satellite Satellite 1549 1669 -203 1 725 662 200 6 19 chrUextra 18397682 18397840 -10606816 + HETRP_DM Satellite Satellite 1529 1684 -188 1 725 388 121 0 0 chrUextra 18397964 18398022 -10606634 + HETRP_DM Satellite Satellite 1529 1586 -286 1 725 640 116 0 9 chrUextra 18398139 18398252 -10606404 - ARS406_DM Unknown Unknown -241 112 1 1 725 2838 179 8 10 chrUextra 18398158 18398828 -10605828 + SAR_DM Satellite Satellite 195 862 -610 1 725 5424 40 9 0 chrUextra 18398931 18399623 -10605033 - R1_DM LINE R1 -1982 3374 2677 1 725 217 122 82 0 chrUextra 18400361 18400410 -10604246 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 1 725 3049 132 4 9 chrUextra 18400531 18401064 -10603592 + TAHRE LINE telomeric 9931 10460 -3 1 725 349 236 0 136 chrUextra 18401060 18401207 -10603449 + TAHRE LINE telomeric 7219 7345 -3118 1 725 34 24 0 0 chrUextra 18401406 18401447 -10603209 + AT_rich Low_complexity Low_complexity 1 41 0 1 725 5864 4 0 0 chrUextra 18402099 18402791 -10601865 + DMRT1B LINE R1 271 962 -4221 1 725 5892 3 1 0 chrUextra 18402892 18403583 -10601073 - R1_DM LINE R1 -2312 3044 2353 1 725 5847 7 0 0 chrUextra 18403683 18404375 -10600281 - DOC2_DM LINE Jockey -1289 3504 2813 1 725 3561 32 0 4 chrUextra 18404475 18404938 -10599718 + CIRCE LINE Composite 4520 4980 -1376 1 725 324 26 0 0 chrUextra 18405128 18405167 -10599489 - R1_DM LINE R1 -4037 1319 1281 1 725 21 0 0 0 chrUextra 18405711 18405732 -10598924 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 1273 19 0 18 chrUextra 18406554 18406719 -10597937 - NTS_DM Other Other -78 162 1 1 725 1489 6 0 0 chrUextra 18406851 18407030 -10597626 - NTS_DM Other Other -61 179 1 1 725 1843 4 17 13 chrUextra 18407030 18407269 -10597387 - NTS_DM Other Other 0 240 1 1 725 1806 13 17 13 chrUextra 18407269 18407508 -10597148 - NTS_DM Other Other 0 240 1 1 725 5929 0 1 4 chrUextra 18407643 18408335 -10596321 - SSU-rRNA_Dme rRNA rRNA -668 1327 638 1 725 239 261 11 0 chrUextra 18409230 18409318 -10595338 + ROVER-I_DM LTR Gypsy 1446 1534 -5050 1 725 4541 39 0 0 chrUextra 18409330 18409919 -10594737 - PROTOP_A DNA P 0 1105 517 1 725 2097 61 17 0 chrUextra 18410019 18410316 -10594340 - Baggins1 LINE LOA -361 5092 4791 1 725 697 55 0 109 chrUextra 18411614 18411816 -10592840 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 725 1620 15 0 0 chrUextra 18411816 18412295 -10592361 + (ACATG)n Simple_repeat Simple_repeat 1 479 0 1 725 917 77 6 18 chrUextra 18412395 18413087 -10591569 + RSP Satellite Satellite 1 683 0 1 725 5606 1 1 1 chrUextra 18413187 18413879 -10590777 + Copia_I LTR Copia 2313 3004 -1589 1 725 5434 2 0 2 chrUextra 18414049 18414671 -10589985 + SSU-rRNA_Dme rRNA rRNA 1 621 -1374 1 725 4928 84 3 13 chrUextra 18414773 18415463 -10589193 - Gypsy12_I LTR Gypsy -99 5447 4765 1 725 698 88 9 0 chrUextra 18415563 18415677 -10588979 - ARS406_DM Unknown Unknown -230 123 9 1 725 2928 161 25 13 chrUextra 18415579 18416252 -10588404 + SAR_DM Satellite Satellite 180 860 -612 1 725 1769 25 8 4 chrUextra 18416355 18416593 -10588063 + G_DM LINE Jockey 4108 4346 0 1 725 2610 71 18 3 chrUextra 18416610 18416990 -10587666 + PROTOP_A DNA P 720 1105 0 1 725 573 14 0 0 chrUextra 18417147 18417219 -10587437 + QUASIMODO_LTR LTR Gypsy 290 361 -297 1 725 579 11 118 8 chrUextra 18417220 18417586 -10587070 + (TA)n Simple_repeat Simple_repeat 1 406 0 1 725 21 0 0 0 chrUextra 18417586 18417607 -10587049 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 551 0 124 12 chrUextra 18417607 18417768 -10586888 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 725 575 28 0 0 chrUextra 18417768 18417839 -10586817 + DIVER_LTR LTR Pao 1 71 -153 1 725 5570 16 0 0 chrUextra 18417939 18418631 -10586025 - IDEFIX_I LTR Gypsy -4637 991 300 1 725 757 40 10 0 chrUextra 18418844 18418945 -10585711 - DNAREP1_DM LINE Penelope 0 594 493 1 725 2196 11 0 78 chrUextra 18418946 18419253 -10585403 + DM176_LTR LTR Gypsy 1 283 -224 1 725 1314 24 24 0 chrUextra 18419254 18419423 -10585233 + DM176_LTR LTR Gypsy 251 423 -84 1 725 365 143 0 0 chrUextra 18419558 18419615 -10585041 - DNAREP1_DM LINE Penelope -479 115 59 1 725 2386 43 3 5 chrUextra 18419615 18419940 -10584716 + Gypsy6A_LTR LTR Gypsy 1 408 -12 1 725 2338 11 4 0 chrUextra 18419940 18420215 -10584441 + Gypsy12_LTR LTR Gypsy 1 276 -2060 1 725 3001 49 98 4 chrUextra 18420315 18421007 -10583649 - IDEFIX_I LTR Gypsy -2652 2976 2220 1 725 5883 6 0 3 chrUextra 18421107 18421799 -10582857 - G_DM LINE Jockey -980 3366 2677 1 725 1494 303 38 6 chrUextra 18421899 18422590 -10582066 + MICROPIA_I LTR Gypsy 2425 3137 -1339 1 725 5979 3 0 0 chrUextra 18422691 18423383 -10581273 - R1_DM LINE R1 -1563 3793 3102 1 725 2686 171 13 64 chrUextra 18423483 18424175 -10580481 - SAR_DM Satellite Satellite -382 1090 434 1 725 2815 186 18 9 chrUextra 18424281 18424952 -10579704 - SAR_DM Satellite Satellite -514 958 282 1 725 721 29 9 29 chrUextra 18425067 18425172 -10579484 + (TAA)n Simple_repeat Simple_repeat 3 105 0 1 725 1371 145 93 13 chrUextra 18425174 18425474 -10579182 + MDG1_LTR LTR Gypsy 89 412 -30 1 725 922 262 43 7 chrUextra 18425475 18425752 -10578904 + BS2 LINE Jockey 2721 3007 -1714 1 725 2917 181 10 17 chrUextra 18425859 18426551 -10578105 - SAR_DM Satellite Satellite -490 982 296 1 725 5919 1 0 0 chrUextra 18426651 18427343 -10577313 - ROO_I LTR Pao -5777 2479 1788 1 725 1903 14 64 4 chrUextra 18427443 18427724 -10576932 + STALKER4_I LTR Gypsy 6095 6392 -138 1 725 2636 53 1 19 chrUextra 18427719 18428096 -10576560 + STALKER4_LTR LTR Gypsy 64 399 -3 1 725 2856 168 9 31 chrUextra 18428235 18428915 -10575741 + SAR_DM Satellite Satellite 439 1103 -369 1 725 918 0 0 0 chrUextra 18429617 18429719 -10574937 + (CAAAA)n Simple_repeat Simple_repeat 4 105 0 1 725 1461 68 10 0 chrUextra 18429819 18430026 -10574630 - R1_DM LINE R1 -5147 209 1 1 725 934 35 0 0 chrUextra 18430059 18430173 -10574483 - R1_DM LINE R1 0 5356 5243 1 725 2729 32 3 0 chrUextra 18430170 18430511 -10574145 - R1_DM LINE R1 -290 5066 4725 1 725 3240 3 10 0 chrUextra 18430611 18431002 -10573654 - DMRT1A LINE R1 -4044 1139 745 1 725 1620 0 0 0 chrUextra 18431002 18431303 -10573353 + (TTGTG)n Simple_repeat Simple_repeat 1 301 0 1 725 5107 35 51 13 chrUextra 18431405 18432095 -10572561 + DOC3_DM LINE Jockey 2819 3534 -1206 1 725 5718 14 1 0 chrUextra 18432195 18432887 -10571769 + FW_DM LINE Jockey 2469 3161 -1531 1 725 5929 0 1 4 chrUextra 18432987 18433679 -10570977 - SSU-rRNA_Dme rRNA rRNA -405 1590 901 1 725 1739 224 49 20 chrUextra 18433780 18434273 -10570383 - Gypsy12_LTR LTR Gypsy -1829 507 1 1 725 1458 80 0 0 chrUextra 18434272 18434471 -10570185 - Gypsy12_I LTR Gypsy 0 5546 5348 1 725 590 312 35 35 chrUextra 18434944 18435259 -10569397 - Gypsy3_I LTR Gypsy -4631 1546 1232 1 725 5921 0 0 3 chrUextra 18435363 18436055 -10568601 + ROO_I LTR Pao 5074 5763 -2493 1 725 1062 61 0 0 chrUextra 18436164 18436311 -10568345 + ARS406_DM Unknown Unknown 43 189 -164 1 725 3189 269 64 28 chrUextra 18436214 18437616 -10567040 - SAR_DM Satellite Satellite -208 1452 1 1 725 877 70 0 0 chrUextra 18437510 18437639 -10567017 + ARS406_DM Unknown Unknown 1 129 -224 1 725 1369 300 26 17 chrUextra 18437739 18438393 -10566263 + MICROPIA_I LTR Gypsy 2398 3045 -1431 1 725 5470 35 12 0 chrUextra 18438531 18439222 -10565434 - IDEFIX_I LTR Gypsy -3520 2108 1410 1 725 656 288 131 14 chrUextra 18439324 18439683 -10564973 + Gypsy7_I LTR Gypsy 1267 1667 -3317 1 725 1314 29 6 39 chrUextra 18439709 18439891 -10564765 - G5A_DM LINE Jockey -3 2838 2663 1 725 295 317 0 0 chrUextra 18439892 18440012 -10564644 + Gypsy7_I LTR Gypsy 1239 1358 -3626 1 725 5069 53 15 3 chrUextra 18440115 18440794 -10563862 - R1_DM LINE R1 -4561 795 109 1 725 5572 20 26 3 chrUextra 18440907 18441599 -10563057 - DMCR1A LINE CR1 -916 3554 2847 1 725 2819 180 15 15 chrUextra 18441704 18442391 -10562265 - SAR_DM Satellite Satellite -577 895 209 1 725 5873 3 0 0 chrUextra 18442491 18443183 -10561473 + FW_DM LINE Jockey 2586 3277 -1415 1 725 2657 21 21 3 chrUextra 18443635 18443973 -10560683 + PROTOP_A DNA P 419 762 -343 1 725 3164 179 9 7 chrUextra 18444084 18444767 -10559889 + SAR_DM Satellite Satellite 167 850 -622 1 725 3671 106 80 7 chrUextra 18444867 18445426 -10559230 + Gypsy12_I LTR Gypsy 1316 1915 -3631 1 725 1213 0 0 0 chrUextra 18445426 18445559 -10559097 + TABOR_LTR LTR Gypsy 1 133 -373 1 725 6099 13 1 0 chrUextra 18445659 18446351 -10558305 - DM1731_I LTR Copia -2684 1292 600 1 725 6141 4 0 0 chrUextra 18446451 18447143 -10557513 + ROO_I LTR Pao 5519 6210 -2046 1 725 6018 0 0 0 chrUextra 18447243 18447935 -10556721 + QUASIMODO_I LTR Gypsy 3824 4515 -1545 1 725 5205 27 14 8 chrUextra 18448035 18448676 -10555980 + NINJA_I LTR Pao 2577 3221 -2790 1 725 494 0 0 0 chrUextra 18448671 18448727 -10555929 + NINJA_I LTR Pao 3439 3494 -2517 1 725 970 67 7 15 chrUextra 18448827 18448964 -10555692 - BATUMI_I LTR Pao -7827 136 1 1 725 2121 48 3 30 chrUextra 18448964 18449266 -10555390 - BATUMI_I LTR Pao -679 7284 6991 1 725 21 89 0 0 chrUextra 18449290 18449346 -10555310 + AT_rich Low_complexity Low_complexity 1 56 0 1 725 3099 186 16 9 chrUextra 18449619 18450308 -10554348 + SAR_DM Satellite Satellite 256 949 -523 1 725 636 20 39 39 chrUextra 18450411 18450513 -10554143 + NTS_DM Other Other 139 240 0 1 725 1824 21 17 17 chrUextra 18450513 18450753 -10553903 + NTS_DM Other Other 1 240 0 1 725 1835 17 17 17 chrUextra 18450753 18450993 -10553663 + NTS_DM Other Other 1 240 0 1 725 984 9 0 0 chrUextra 18450993 18451103 -10553553 + NTS_DM Other Other 1 110 -130 1 725 3043 189 9 9 chrUextra 18451204 18451889 -10552767 - SAR_DM Satellite Satellite -593 879 195 1 725 1722 18 18 18 chrUextra 18451995 18452224 -10552432 + NTS_DM Other Other 12 240 0 1 725 1930 4 17 13 chrUextra 18452224 18452463 -10552193 + NTS_DM Other Other 1 240 0 1 725 1813 5 13 13 chrUextra 18452463 18452687 -10551969 + NTS_DM Other Other 1 224 -16 1 725 1707 18 18 18 chrUextra 18452787 18453015 -10551641 + NTS_DM Other Other 13 240 0 1 725 1813 21 17 17 chrUextra 18453015 18453255 -10551401 + NTS_DM Other Other 1 240 0 1 725 1685 18 13 22 chrUextra 18453255 18453479 -10551177 + NTS_DM Other Other 1 222 -18 1 725 2450 98 19 45 chrUextra 18453579 18454267 -10550389 - DMSAT6 Satellite Satellite -82 669 1 1 725 5808 2 2 0 chrUextra 18454371 18455010 -10549646 - LSU-rRNA_Dme rRNA rRNA -621 3279 2640 1 725 441 19 0 18 chrUextra 18455008 18455063 -10549593 - R1_DM LINE R1 0 5356 5303 1 725 6097 1 0 0 chrUextra 18455163 18455855 -10548801 - LSU-rRNA_Dme rRNA rRNA -2984 916 225 1 725 6120 0 0 1 chrUextra 18455955 18456647 -10548009 + ROO_I LTR Pao 3755 4445 -3811 1 725 2656 59 3 0 chrUextra 18456748 18457102 -10547554 + XDMR Unknown Unknown 7 361 0 1 725 2414 71 3 0 chrUextra 18457102 18457439 -10547217 + XDMR Unknown Unknown 1 338 -23 1 725 907 9 0 27 chrUextra 18457543 18457655 -10547001 + NTS_DM Other Other 25 133 -107 1 725 1304 18 0 6 chrUextra 18457655 18457820 -10546836 + NTS_DM Other Other 38 201 -39 1 725 907 9 0 27 chrUextra 18457872 18457984 -10546672 + NTS_DM Other Other 25 133 -107 1 725 1486 20 20 20 chrUextra 18457984 18458187 -10546469 + NTS_DM Other Other 38 240 0 1 725 385 23 0 0 chrUextra 18458187 18458231 -10546425 + NTS_DM Other Other 1 44 -196 1 725 5684 17 3 0 chrUextra 18458331 18459023 -10545633 + PROTOP_A DNA P 163 856 -249 1 725 6059 1 1 3 chrUextra 18459123 18459815 -10544841 - MICROPIA_I LTR Gypsy -5 4471 3781 1 725 5502 6 1 38 chrUextra 18459918 18460607 -10544049 + ROVER-I_DM LTR Gypsy 575 1238 -5346 1 725 3005 188 19 23 chrUextra 18460707 18461399 -10543257 - SAR_DM Satellite Satellite -641 689 1 1 725 5884 4 3 0 chrUextra 18461499 18462191 -10542465 + IDEFIX_I LTR Gypsy 4085 4778 -850 1 725 5043 15 0 55 chrUextra 18462291 18462983 -10541673 + DM176_I LTR Gypsy 302 955 -5465 1 725 34 24 0 0 chrUextra 18463590 18463631 -10541025 + AT_rich Low_complexity Low_complexity 1 41 0 1 725 6314 4 0 0 chrUextra 18463875 18464567 -10540089 + Invader1_I LTR Gypsy 1679 2370 -816 1 725 4217 2 0 0 chrUextra 18464667 18465129 -10539527 - LSU-rRNA_Dme rRNA rRNA -1651 2249 1788 1 725 1575 0 11 5 chrUextra 18465173 18465359 -10539297 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1602 1 725 2862 177 14 25 chrUextra 18465459 18466125 -10538531 + SAR_DM Satellite Satellite 462 1119 -353 1 725 419 184 18 27 chrUextra 18466039 18466151 -10538505 - XDMR_DM Unknown Unknown 0 360 250 1 725 6331 0 0 0 chrUextra 18466251 18466943 -10537713 - DIVER_I LTR Pao -947 4696 4005 1 725 311 0 0 0 chrUextra 18467051 18467087 -10537569 - MAX_I LTR Pao -6959 955 920 1 725 216 0 0 0 chrUextra 18467131 18467155 -10537501 + (A)n Simple_repeat Simple_repeat 1 24 0 1 725 1181 84 381 0 chrUextra 18467217 18467477 -10537179 - MAX_I LTR Pao -6999 915 557 1 725 6154 0 0 1 chrUextra 18467835 18468527 -10536129 + LSU-rRNA_Dme rRNA rRNA 498 1188 -2712 1 725 5895 0 17 1 chrUextra 18468627 18469319 -10535337 + ROO_I LTR Pao 182 884 -7372 1 725 5909 16 1 0 chrUextra 18469419 18470111 -10534545 + BLOOD_I LTR Gypsy 2887 3579 -3034 1 725 2518 174 7 10 chrUextra 18470211 18470748 -10533908 - SAR_DM Satellite Satellite -447 688 66 1 725 802 50 0 0 chrUextra 18470748 18470848 -10533808 + ARS406_DM Unknown Unknown 90 189 -164 1 725 2518 174 7 10 chrUextra 18470848 18470902 -10533754 - SAR_DM Satellite Satellite -447 65 1 1 725 6019 1 0 1 chrUextra 18471003 18471695 -10532961 + ROO_I LTR Pao 3444 4134 -4122 1 725 1463 243 73 19 chrUextra 18471795 18472261 -10532395 + TAHRE LINE telomeric 9615 10105 -358 1 725 586 140 18 0 chrUextra 18472248 18472362 -10532294 + HETA LINE telomeric 5795 5910 -171 1 725 28 0 0 0 chrUextra 18472385 18472413 -10532243 + AT_rich Low_complexity Low_complexity 1 28 0 1 725 2251 31 0 33 chrUextra 18472587 18472886 -10531770 - QUASIMODO_I LTR Gypsy -2053 4007 3719 1 725 3021 22 3 13 chrUextra 18472907 18473279 -10531377 - QUASIMODO_I LTR Gypsy -2643 3417 3050 1 725 6218 6 0 0 chrUextra 18473379 18474071 -10530585 + R1_DM LINE R1 4160 4851 -505 1 725 367 352 40 52 chrUextra 18474173 18474691 -10529965 + Copia2_I LTR Copia 146 672 -3490 1 725 6216 3 0 1 chrUextra 18474963 18475655 -10529001 + R1_DM LINE R1 4575 5265 -91 1 725 6060 3 1 0 chrUextra 18475755 18476447 -10528209 - DM176_I LTR Gypsy -951 5469 4777 1 725 6324 0 3 0 chrUextra 18476547 18477239 -10527417 - LSU-rRNA_Dme rRNA rRNA -313 3587 2894 1 725 5566 49 3 4 chrUextra 18477339 18478031 -10526625 - MAX_I LTR Pao -5096 2818 2128 1 725 5469 2 2 0 chrUextra 18478131 18478730 -10525926 + LSU-rRNA_Dme rRNA rRNA 3301 3900 0 1 725 3028 182 9 9 chrUextra 18478923 18479593 -10525063 - SAR_DM Satellite Satellite -611 861 192 1 725 748 102 0 8 chrUextra 18479496 18479615 -10525041 + ARS406_DM Unknown Unknown 1 118 -235 1 725 4838 119 0 0 chrUextra 18479716 18480407 -10524249 - HMSBEAGLE_I LTR Gypsy -1494 5035 4345 1 90 2458 97 22 13 chrUextra 18480507 18481199 -10523457 - DMSAT6 Satellite Satellite -102 698 1 1 726 2346 114 14 17 chrUextra 18482091 18482586 -10522070 - DOC2_DM LINE Jockey -4202 591 6 1 726 638 12 0 0 chrUextra 18482697 18482783 -10521873 - DOC2_DM LINE Jockey 0 4793 4708 1 726 6219 3 0 0 chrUextra 18482883 18483575 -10521081 - R1_DM LINE R1 -1839 3517 2826 1 726 1844 0 18 13 chrUextra 18483675 18483904 -10520752 + NTS_DM Other Other 11 240 0 1 726 1918 4 17 13 chrUextra 18483904 18484143 -10520513 + NTS_DM Other Other 1 240 0 1 726 1813 5 13 13 chrUextra 18484143 18484367 -10520289 + NTS_DM Other Other 1 224 -16 1 726 32 0 0 0 chrUextra 18484594 18484626 -10520030 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 3641 2 2 0 chrUextra 18484758 18485159 -10519497 + SSU-rRNA_Dme rRNA rRNA 1 402 -1593 1 726 24 53 0 0 chrUextra 18485834 18485872 -10518784 + AT_rich Low_complexity Low_complexity 1 38 0 1 726 1799 187 4 3 chrUextra 18486051 18486743 -10517913 - SAR_DM Satellite Satellite -627 692 1 1 726 2804 192 16 22 chrUextra 18486843 18487535 -10517121 + SAR_DM Satellite Satellite 470 1157 -315 1 726 3364 170 9 9 chrUextra 18487637 18488326 -10516330 - SAR_DM Satellite Satellite -589 883 195 1 726 5575 12 0 16 chrUextra 18488427 18489119 -10515537 + Invader2_I LTR Gypsy 3880 4560 -32 1 726 3954 50 66 0 chrUextra 18489220 18489764 -10514892 - MDG1_I LTR Gypsy -4883 1713 1134 1 726 350 149 0 0 chrUextra 18489836 18489910 -10514746 - MDG1_I LTR Gypsy -5462 1134 1061 1 726 6165 3 1 1 chrUextra 18490010 18490701 -10513955 - R1_DM LINE R1 -3570 1786 1096 1 726 423 106 45 0 chrUextra 18490801 18490867 -10513789 + NTS_DM Other Other 22 90 -150 1 726 28 48 0 0 chrUextra 18491140 18491182 -10513474 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 6301 1 0 0 chrUextra 18491592 18492283 -10512373 + DOC LINE Jockey 3710 4400 -325 1 726 1251 343 19 16 chrUextra 18492385 18493072 -10511584 + Copia2_I LTR Copia 2597 3285 -877 1 726 860 95 0 0 chrUextra 18493174 18493300 -10511356 - ARS406_DM Unknown Unknown -227 126 1 1 726 3032 180 9 8 chrUextra 18493204 18493864 -10510792 + SAR_DM Satellite Satellite 192 852 -620 1 726 378 100 13 79 chrUextra 18493965 18494041 -10510615 - Gypsy12_LTR LTR Gypsy -2265 71 1 1 726 3111 69 79 2 chrUextra 18494040 18494645 -10510011 - Gypsy12_I LTR Gypsy 0 5546 4895 1 726 3021 3 0 6 chrUextra 18494756 18495101 -10509555 - Copia_I LTR Copia -4250 343 1 1 726 239 0 0 0 chrUextra 18495101 18495135 -10509521 - Copia_LTR LTR Copia 0 276 243 1 726 2334 11 0 0 chrUextra 18495135 18495411 -10509245 - Copia_LTR LTR Copia 0 276 1 1 726 324 0 0 0 chrUextra 18495411 18495447 -10509209 + (CTATT)n Simple_repeat Simple_repeat 2 37 0 1 726 433 32 0 16 chrUextra 18495547 18495611 -10509045 + NTS_DM Other Other 139 201 -39 1 726 21 57 0 0 chrUextra 18495611 18495646 -10509010 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 840 9 9 36 chrUextra 18495672 18495784 -10508872 + NTS_DM Other Other 25 133 -107 1 726 851 0 0 0 chrUextra 18495784 18495880 -10508776 + NTS_DM Other Other 38 133 -107 1 726 1472 20 20 20 chrUextra 18495880 18496083 -10508573 + NTS_DM Other Other 38 240 0 1 726 1296 19 0 0 chrUextra 18496083 18496237 -10508419 + NTS_DM Other Other 1 154 -86 1 726 3115 179 5 12 chrUextra 18496338 18497010 -10507646 - SAR_DM Satellite Satellite -611 861 195 1 726 652 107 0 35 chrUextra 18496913 18497029 -10507627 + ARS406_DM Unknown Unknown 1 112 -241 1 726 6152 6 0 3 chrUextra 18497129 18497820 -10506836 + FW_DM LINE Jockey 1780 2468 -2224 1 726 5506 32 16 3 chrUextra 18497920 18498611 -10506045 + PROTOP_A DNA P 354 1053 -52 1 726 375 63 56 112 chrUextra 18498714 18498803 -10505853 - Gypsy_LTR LTR Gypsy -252 230 147 1 726 2452 166 8 8 chrUextra 18499509 18500000 -10504656 - SAR_DM Satellite Satellite -569 903 413 1 726 918 182 5 0 chrUextra 18500000 18500187 -10504469 - SAR_DM Satellite Satellite -701 771 584 1 726 5748 15 4 4 chrUextra 18500293 18500984 -10503672 + PROTOP_A DNA P 57 747 -358 1 726 4049 69 18 0 chrUextra 18501084 18501696 -10502960 + BS3_DM LINE Jockey 326 1044 -746 1 726 576 146 0 0 chrUextra 18501686 18501775 -10502881 + BS3_DM LINE Jockey 1311 1399 -391 1 726 6074 4 0 1 chrUextra 18501875 18502566 -10502090 + DOC LINE Jockey 1515 2204 -2521 1 726 907 9 0 27 chrUextra 18502679 18502791 -10501865 + NTS_DM Other Other 25 133 -107 1 726 1304 18 0 6 chrUextra 18502791 18502956 -10501700 + NTS_DM Other Other 38 201 -39 1 726 889 18 0 27 chrUextra 18503008 18503120 -10501536 + NTS_DM Other Other 25 133 -107 1 726 1304 18 0 6 chrUextra 18503120 18503285 -10501371 + NTS_DM Other Other 38 201 -39 1 726 21 57 0 0 chrUextra 18503285 18503320 -10501336 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 3047 173 0 0 chrUextra 18503457 18503984 -10500672 + HETA LINE telomeric 2917 3443 -2638 1 726 935 161 6 6 chrUextra 18503986 18504148 -10500508 + HETA LINE telomeric 4469 4630 -1451 1 726 3369 175 6 7 chrUextra 18504253 18504939 -10499717 + SAR_DM Satellite Satellite 246 930 -542 1 726 5451 29 6 13 chrUextra 18505039 18505730 -10498926 + Gypsy12_LTR LTR Gypsy 1401 2086 -250 1 726 2192 23 0 4 chrUextra 18506263 18506521 -10498135 - QUASIMODO_LTR LTR Gypsy 0 658 402 1 726 5249 2 2 2 chrUextra 18507524 18508103 -10496553 - SSU-rRNA_Dme rRNA rRNA 0 1995 1417 1 726 3315 170 9 10 chrUextra 18508203 18508894 -10495762 - SAR_DM Satellite Satellite -399 1073 384 1 726 23 0 0 0 chrUextra 18509023 18509046 -10495610 + AT_rich Low_complexity Low_complexity 1 23 0 1 726 2886 129 22 14 chrUextra 18509174 18509683 -10494973 - Stalker2_I LTR Gypsy -6509 893 381 1 726 34 24 0 0 chrUextra 18509991 18510032 -10494624 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 21 95 0 0 chrUextra 18510245 18510308 -10494348 + AT_rich Low_complexity Low_complexity 1 63 0 1 726 1375 13 0 0 chrUextra 18510320 18510476 -10494180 + LSU-rRNA_Dme rRNA rRNA 1 156 -3744 1 726 2826 196 17 22 chrUextra 18510581 18511267 -10493389 - SAR_DM Satellite Satellite -658 682 1 1 726 6201 1 1 3 chrUextra 18511367 18512058 -10492598 + SSU-rRNA_Dme rRNA rRNA 537 1226 -769 1 726 6077 0 0 0 chrUextra 18512158 18512849 -10491807 - ROO_I LTR Pao -6957 1299 609 1 726 411 0 0 0 chrUextra 18512949 18512994 -10491662 - NTS_DM Other Other -158 82 38 1 726 840 9 9 36 chrUextra 18512994 18513106 -10491550 - NTS_DM Other Other -107 133 25 1 726 21 57 0 0 chrUextra 18513132 18513167 -10491489 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 1304 18 0 6 chrUextra 18513167 18513332 -10491324 - NTS_DM Other Other -39 201 38 1 726 907 9 0 27 chrUextra 18513332 18513444 -10491212 - NTS_DM Other Other -107 133 25 1 726 1015 28 7 7 chrUextra 18513496 18513640 -10491016 - NTS_DM Other Other -39 201 58 1 726 2593 180 101 39 chrUextra 18513758 18514429 -10490227 + TAHRE LINE telomeric 7071 7783 -2680 1 726 1934 0 5 0 chrUextra 18514531 18514753 -10489903 - BLASTOPIA_I LTR Gypsy -4258 223 1 1 726 2192 19 7 11 chrUextra 18514753 18515025 -10489631 - BLASTOPIA_LTR LTR Gypsy 0 275 5 1 726 1128 124 0 0 chrUextra 18515025 18515203 -10489453 + (CATA)n Simple_repeat Simple_repeat 3 180 0 1 726 6033 1 7 0 chrUextra 18515322 18516013 -10488643 + DM176_I LTR Gypsy 4771 5466 -954 1 726 1184 65 0 0 chrUextra 18516113 18516266 -10488390 - Gypsy12_I LTR Gypsy -4031 1515 1363 1 726 2437 108 2 47 chrUextra 18516268 18516802 -10487854 - Gypsy12_I LTR Gypsy -4751 795 231 1 726 3036 251 47 22 chrUextra 18516909 18518386 -10486270 - SAR_DM Satellite Satellite -255 1513 1 1 726 3129 0 3 3 chrUextra 18518486 18518846 -10485810 - R1_DM LINE R1 -4145 1211 852 1 726 973 18 0 0 chrUextra 18518843 18518952 -10485704 - LSU-rRNA_Dme rRNA rRNA -1214 2686 2578 1 726 2078 0 0 0 chrUextra 18518948 18519177 -10485479 - R2_DM LINE R2 -4 3603 3375 1 726 636 14 14 0 chrUextra 18519277 18519351 -10485305 - NTS_DM Other Other -165 75 1 1 726 1472 20 20 20 chrUextra 18519351 18519554 -10485102 - NTS_DM Other Other 0 240 38 1 726 851 0 0 0 chrUextra 18519554 18519650 -10485006 - NTS_DM Other Other -107 133 38 1 726 870 9 9 27 chrUextra 18519650 18519761 -10484895 - NTS_DM Other Other -107 133 25 1 726 21 57 0 0 chrUextra 18519787 18519822 -10484834 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 1084 21 0 7 chrUextra 18519822 18519968 -10484688 - NTS_DM Other Other -39 201 57 1 726 2074 42 66 0 chrUextra 18520068 18520354 -10484302 + PROTOP DNA P 252 556 -3924 1 726 2126 46 4 0 chrUextra 18520351 18520611 -10484045 + PROTOP DNA P 4220 4480 0 1 726 2833 62 5 19 chrUextra 18520860 18521239 -10483417 + Baggins1 LINE LOA 4818 5191 -262 1 726 992 288 47 32 chrUextra 18521779 18522336 -10482320 + BLOOD_I LTR Gypsy 1772 2336 -4277 1 726 5986 17 0 0 chrUextra 18522441 18523132 -10481524 + FW_DM LINE Jockey 2282 2972 -1720 1 726 5949 23 3 0 chrUextra 18523232 18523923 -10480733 + FW_DM LINE Jockey 3240 3932 -760 1 726 3070 160 9 56 chrUextra 18524031 18524713 -10479943 - SAR_DM Satellite Satellite -416 1056 407 1 726 28 48 0 0 chrUextra 18524859 18524901 -10479755 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 32 0 0 0 chrUextra 18525229 18525261 -10479395 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 1010 0 0 0 chrUextra 18525394 18525505 -10479151 + SSU-rRNA_Dme rRNA rRNA 1 111 -1884 1 726 5699 26 0 1 chrUextra 18525606 18526295 -10478361 + STALKER4_I LTR Gypsy 2449 3136 -3394 1 726 28 48 0 0 chrUextra 18527501 18527543 -10477113 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 329 177 32 0 chrUextra 18527816 18527878 -10476778 - NTS_DM Other Other -150 90 27 1 726 360 45 0 0 chrUextra 18527979 18528023 -10476633 - R1_DM LINE R1 -5312 44 1 1 726 5261 26 2 0 chrUextra 18528056 18528669 -10475987 - R1_DM LINE R1 0 5356 4743 1 726 5481 1 1 68 chrUextra 18528769 18529460 -10475196 + LSU-rRNA_Dme rRNA rRNA 1678 2322 -1578 1 726 28 48 0 0 chrUextra 18529874 18529916 -10474740 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 377 129 32 0 chrUextra 18530189 18530251 -10474405 - NTS_DM Other Other -150 90 27 1 726 6193 4 7 0 chrUextra 18530351 18531042 -10473614 - DOC LINE Jockey -1005 3720 3025 1 726 5169 61 32 0 chrUextra 18531142 18531833 -10472823 - IDEFIX_I LTR Gypsy -4076 1552 840 1 726 5347 65 3 3 chrUextra 18531933 18532624 -10472032 - R1_DM LINE R1 -4658 698 8 1 726 752 12 0 0 chrUextra 18532726 18532811 -10471845 - R1_DM LINE R1 -865 4491 4407 1 726 5028 15 2 2 chrUextra 18532831 18533414 -10471242 - R1_DM LINE R1 -1074 4282 3700 1 726 857 62 9 0 chrUextra 18533515 18533628 -10471028 - R1_DM LINE R1 -5242 114 1 1 726 988 35 0 0 chrUextra 18533661 18533775 -10470881 - R1_DM LINE R1 0 5356 5243 1 726 3701 23 2 0 chrUextra 18533772 18534206 -10470450 - R1_DM LINE R1 -290 5066 4632 1 726 344 265 114 96 chrUextra 18534329 18534609 -10470047 - Invader1_LTR LTR Gypsy -55 368 84 1 726 870 171 119 11 chrUextra 18534818 18534995 -10469661 + DMLTR5 LTR Gypsy 44 239 -27 1 726 735 0 12 0 chrUextra 18535097 18535181 -10469475 - SSU-rRNA_Dme rRNA rRNA -1910 85 1 1 726 32 0 0 0 chrUextra 18535313 18535345 -10469311 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 28 48 0 0 chrUextra 18535673 18535715 -10468941 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 377 247 45 0 chrUextra 18535889 18535978 -10468678 + HMSBEAGLE_I LTR Gypsy 2936 3028 -3501 1 726 477 90 3 11 chrUextra 18536245 18536326 -10468330 + BS2 LINE Jockey 4659 4721 0 1 726 378 244 47 8 chrUextra 18536445 18536573 -10468083 - STALKER4_I LTR Gypsy -4140 2390 2258 1 726 5830 9 7 0 chrUextra 18536679 18537370 -10467286 + QUASIMODO_I LTR Gypsy 1050 1745 -4315 1 726 6089 3 9 0 chrUextra 18537470 18538161 -10466495 - DM176_I LTR Gypsy -1803 4617 3921 1 726 1053 0 0 0 chrUextra 18538263 18538380 -10466276 + (TCTTG)n Simple_repeat Simple_repeat 5 121 0 1 726 1962 4 0 9 chrUextra 18538380 18538606 -10466050 + DIVER_LTR LTR Pao 1 224 0 1 726 2919 9 0 0 chrUextra 18538627 18538952 -10465704 + DIVER_I LTR Pao 1 325 -5318 1 726 2869 185 28 14 chrUextra 18539052 18539743 -10464913 + SAR_DM Satellite Satellite 203 902 -570 1 726 1754 0 0 0 chrUextra 18540335 18540534 -10464122 - ALUII_DM Unknown Unknown 0 240 42 1 726 3413 171 9 7 chrUextra 18540634 18541324 -10463332 - SAR_DM Satellite Satellite -430 1042 352 1 726 3882 16 0 0 chrUextra 18541425 18541867 -10462789 + CIRCE LINE Composite 529 970 -5386 1 726 818 39 29 0 chrUextra 18542009 18542111 -10462545 + CIRCE LINE Composite 973 1077 -5279 1 726 251 186 0 0 chrUextra 18543054 18543097 -10461559 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 1 726 237 175 0 0 chrUextra 18543146 18543186 -10461470 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 242 103 25 25 chrUextra 18543238 18543278 -10461378 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 3122 0 0 0 chrUextra 18543351 18543698 -10460958 + G_DM LINE Jockey 1 347 -3999 1 726 3136 19 3 8 chrUextra 18543798 18544171 -10460485 + R1_DM LINE R1 4986 5356 0 1 726 2786 19 0 0 chrUextra 18544169 18544489 -10460167 + LSU-rRNA_Dme rRNA rRNA 2640 2959 -941 1 726 4349 48 63 6 chrUextra 18544589 18545221 -10459435 - Baggins1 LINE LOA -1420 4033 3366 1 726 547 106 0 12 chrUextra 18545194 18545280 -10459376 - Baggins1 LINE LOA -3224 2229 2145 1 726 2869 172 40 29 chrUextra 18545380 18546063 -10458593 + SAR_DM Satellite Satellite 469 1158 -314 1 726 5993 4 1 1 chrUextra 18546171 18546862 -10457794 - MDG3_I LTR Gypsy -285 4701 4011 1 726 5562 18 4 7 chrUextra 18546962 18547653 -10457003 - PROTOP_A DNA P -104 1001 313 1 726 3145 170 12 25 chrUextra 18547753 18548442 -10456214 + SAR_DM Satellite Satellite 411 1090 -382 1 726 232 150 0 24 chrUextra 18548548 18548589 -10456067 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 262 150 0 0 chrUextra 18548641 18548681 -10455975 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 22 56 0 0 chrUextra 18548686 18548722 -10455934 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 4027 0 2 0 chrUextra 18548794 18549235 -10455421 - LSU-rRNA_Dme rRNA rRNA 0 3900 3459 1 726 5912 13 0 0 chrUextra 18549335 18550026 -10454630 - ROO_I LTR Pao -4682 3574 2884 1 726 2529 188 87 31 chrUextra 18550126 18550813 -10453843 + SAR_DM Satellite Satellite 523 1248 -224 1 726 6083 3 1 1 chrUextra 18550917 18551608 -10453048 - R1_DM LINE R1 -4034 1322 632 1 726 5050 10 2 3 chrUextra 18551708 18552290 -10452366 + R1_DM LINE R1 3307 3887 -1469 1 726 831 38 0 9 chrUextra 18552293 18552399 -10452257 + R1_DM LINE R1 4143 4247 -1109 1 726 28 48 0 0 chrUextra 18552754 18552796 -10451860 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 32 0 0 0 chrUextra 18553123 18553155 -10451501 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 2923 180 9 22 chrUextra 18553299 18553981 -10450675 - SAR_DM Satellite Satellite -354 1118 446 1 726 2550 27 0 0 chrUextra 18554081 18554379 -10450277 + ROO_I LTR Pao 1380 1677 -6579 1 726 1775 127 70 0 chrUextra 18554379 18554679 -10449977 - MAX_LTR LTR Pao 0 321 1 1 726 551 96 0 0 chrUextra 18554689 18554772 -10449884 - MAX_I LTR Pao -2 7912 7830 1 726 5251 53 0 14 chrUextra 18554897 18555563 -10449093 + BATUMI_I LTR Pao 4315 4971 -2992 1 726 6256 0 0 0 chrUextra 18555663 18556353 -10448303 - G2_DM LINE Jockey -689 2413 1724 1 726 5557 22 19 0 chrUextra 18556454 18557145 -10447511 + MAX_I LTR Pao 1416 2119 -5795 1 726 5612 22 4 3 chrUextra 18557247 18557935 -10446721 - R1_DM LINE R1 -3209 2147 1459 1 726 34 24 0 0 chrUextra 18558669 18558710 -10445946 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 2896 6 0 6 chrUextra 18558827 18559176 -10445480 + BATUMI_I LTR Pao 7617 7963 0 1 726 2242 21 0 27 chrUextra 18559176 18559469 -10445187 + BATUMI_I LTR Pao 7002 7286 -677 1 726 346 34 0 0 chrUextra 18559459 18559518 -10445138 + G_DM LINE Jockey 638 696 -3650 1 726 1139 26 0 7 chrUextra 18559618 18559770 -10444886 - NTS_DM Other Other -52 188 38 1 726 850 18 0 27 chrUextra 18559770 18559882 -10444774 - NTS_DM Other Other -107 133 25 1 726 1234 24 0 6 chrUextra 18559934 18560099 -10444557 - NTS_DM Other Other -39 201 38 1 726 870 9 0 27 chrUextra 18560099 18560211 -10444445 - NTS_DM Other Other -107 133 25 1 726 22 56 0 0 chrUextra 18560237 18560273 -10444383 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 2867 171 14 26 chrUextra 18560410 18561100 -10443556 - SAR_DM Satellite Satellite -366 1106 425 1 726 27 29 0 0 chrUextra 18561258 18561292 -10443364 + AT_rich Low_complexity Low_complexity 1 34 0 1 726 250 33 0 0 chrUextra 18561531 18561561 -10443095 + Baggins1 LINE LOA 4727 4756 -697 1 726 693 103 241 0 chrUextra 18561569 18561714 -10442942 + FB4_DM DNA Tc1 3908 4087 -2 1 726 3009 177 9 9 chrUextra 18561991 18562679 -10441977 - SAR_DM Satellite Satellite -539 933 246 1 726 5887 1 0 1 chrUextra 18562782 18563473 -10441183 + FW_DM LINE Jockey 1437 2126 -2566 1 726 34 24 0 0 chrUextra 18563579 18563620 -10441036 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 561 60 0 12 chrUextra 18564364 18564449 -10440207 - ARS406_DM Unknown Unknown -269 84 1 1 726 2859 181 8 8 chrUextra 18564393 18565055 -10439601 + SAR_DM Satellite Satellite 229 890 -582 1 726 262 106 0 21 chrUextra 18565588 18565636 -10439020 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 726 351 49 65 16 chrUextra 18565658 18565720 -10438936 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 726 579 186 0 8 chrUextra 18565719 18565844 -10438812 - DMLTR5 LTR Gypsy 0 266 143 1 726 5920 0 1 4 chrUextra 18565946 18566637 -10438019 + SSU-rRNA_Dme rRNA rRNA 809 1497 -498 1 726 1322 23 0 6 chrUextra 18566737 18566909 -10437747 - NTS_DM Other Other -69 171 1 1 726 1734 21 17 17 chrUextra 18566909 18567149 -10437507 - NTS_DM Other Other 0 240 1 1 726 1408 20 20 20 chrUextra 18567149 18567352 -10437304 - NTS_DM Other Other 0 240 38 1 726 583 0 13 0 chrUextra 18567352 18567428 -10437228 - NTS_DM Other Other -107 133 57 1 726 2052 210 72 12 chrUextra 18567528 18568211 -10436445 + SAR_DM Satellite Satellite 1 723 -281 1 726 585 0 0 0 chrUextra 18568319 18568384 -10436272 + (TTCTC)n Simple_repeat Simple_repeat 4 68 0 1 726 1620 2 0 0 chrUextra 18568394 18568804 -10435852 + (GAGAA)n Simple_repeat Simple_repeat 1 410 0 1 726 771 10 10 0 chrUextra 18569110 18569206 -10435450 + NTS_DM Other Other 37 133 -107 1 726 787 0 0 10 chrUextra 18569206 18569303 -10435353 + NTS_DM Other Other 38 133 -107 1 726 1408 20 20 20 chrUextra 18569303 18569506 -10435150 + NTS_DM Other Other 38 240 0 1 726 1734 21 17 17 chrUextra 18569506 18569746 -10434910 + NTS_DM Other Other 1 240 0 1 726 466 18 0 0 chrUextra 18569746 18569801 -10434855 + NTS_DM Other Other 1 55 -185 1 726 1834 281 29 3 chrUextra 18570761 18571383 -10433273 - Gypsy4_I LTR Gypsy -3039 3249 2612 1 726 4622 74 70 20 chrUextra 18571483 18572174 -10432482 + Gypsy12_I LTR Gypsy 4539 5263 -283 1 726 5907 3 1 3 chrUextra 18572274 18572965 -10431691 + SSU-rRNA_Dme rRNA rRNA 940 1629 -366 1 726 34 24 0 0 chrUextra 18573151 18573192 -10431464 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 21 95 0 0 chrUextra 18573405 18573468 -10431188 + AT_rich Low_complexity Low_complexity 1 63 0 1 726 2003 0 0 91 chrUextra 18573480 18573756 -10430900 + LSU-rRNA_Dme rRNA rRNA 1 251 -3649 1 726 1587 14 0 0 chrUextra 18573872 18574170 -10430486 + (TTATA)n Simple_repeat Simple_repeat 1 298 0 1 726 2271 36 102 0 chrUextra 18574183 18574488 -10430168 + DM1731_LTR LTR Copia 1 336 0 1 726 437 0 34 0 chrUextra 18574488 18574547 -10430109 + DM1731_I LTR Copia 1 61 -3915 1 726 3349 0 0 3 chrUextra 18574647 18575033 -10429623 + R2_DM LINE R2 3214 3598 -9 1 726 2665 7 3 0 chrUextra 18575029 18575338 -10429318 + LSU-rRNA_Dme rRNA rRNA 2578 2887 -1013 1 726 488 0 0 0 chrUextra 18575438 18575494 -10429162 - SSU-rRNA_Dme rRNA rRNA -1939 56 1 1 726 32 0 0 0 chrUextra 18575626 18575658 -10428998 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 28 48 0 0 chrUextra 18575986 18576028 -10428628 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 618 14 0 0 chrUextra 18576229 18576301 -10428355 - NTS_DM Other Other -168 72 1 1 726 1734 21 17 17 chrUextra 18576301 18576541 -10428115 - NTS_DM Other Other 0 240 1 1 726 1726 17 17 21 chrUextra 18576541 18576782 -10427874 - NTS_DM Other Other 0 240 1 1 726 823 30 29 29 chrUextra 18576782 18576920 -10427736 - NTS_DM Other Other 0 240 103 1 726 4860 93 0 1 chrUextra 18577020 18577710 -10426946 + R1_DM LINE R1 1248 1936 -3420 1 726 514 189 0 0 chrUextra 18577811 18577922 -10426734 - ARS406_DM Unknown Unknown -242 111 1 1 726 2505 206 28 7 chrUextra 18577825 18578500 -10426156 + SAR_DM Satellite Satellite 191 879 -593 1 726 5506 19 0 0 chrUextra 18578602 18579293 -10425363 - QUASIMODO_I LTR Gypsy -4415 1645 955 1 726 1158 122 0 0 chrUextra 18579403 18579583 -10425073 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 726 2316 8 0 0 chrUextra 18579583 18579849 -10424807 + DMLTR5 LTR Gypsy 1 266 0 1 726 2002 0 4 0 chrUextra 18579848 18580084 -10424572 + HMSBEAGLE_I LTR Gypsy 1 237 -6292 1 726 5477 7 35 1 chrUextra 18580184 18580875 -10423781 + Invader2_I LTR Gypsy 3594 4307 -285 1 726 6033 0 3 0 chrUextra 18580975 18581666 -10422990 - LSU-rRNA_Dme rRNA rRNA -364 3536 2844 1 726 1028 165 97 30 chrUextra 18581768 18582037 -10422619 - Gypsy12_LTR LTR Gypsy -892 1444 1158 1 726 688 259 37 84 chrUextra 18582049 18582454 -10422202 - Gypsy12_LTR LTR Gypsy -1258 1078 693 1 726 5435 32 42 1 chrUextra 18582559 18583248 -10421408 + BS2 LINE Jockey 2048 2764 -1957 1 726 5579 25 0 0 chrUextra 18583348 18584039 -10420617 + MDG1_I LTR Gypsy 2808 3498 -3098 1 726 256 227 0 0 chrUextra 18584195 18584261 -10420395 - HMSBEAGLE_I LTR Gypsy -2085 4444 4379 1 726 463 284 27 11 chrUextra 18584293 18584533 -10420123 - HMSBEAGLE_I LTR Gypsy -2209 4320 4106 1 726 5803 1 0 0 chrUextra 18584930 18585621 -10419035 + ROO_I LTR Pao 647 1337 -6919 1 726 2719 12 0 3 chrUextra 18585721 18586043 -10418613 - DMRT1B LINE R1 -4862 321 1 1 726 349 39 0 89 chrUextra 18586268 18586324 -10418332 - QUASIMODO_LTR LTR Gypsy -607 51 1 1 726 421 82 0 0 chrUextra 18586351 18586412 -10418244 + ROVER-LTR_DM LTR Gypsy 46 106 -261 1 726 2257 177 6 10 chrUextra 18587303 18587356 -10417300 - SAR_DM Satellite Satellite -417 686 619 1 726 1068 91 0 0 chrUextra 18587356 18587521 -10417135 + ARS406_DM Unknown Unknown 1 165 -188 1 726 2257 177 6 10 chrUextra 18587521 18587992 -10416664 - SAR_DM Satellite Satellite -417 618 1 1 726 5975 1 0 0 chrUextra 18588094 18588785 -10415871 + FW_DM LINE Jockey 3141 3831 -861 1 726 5295 6 4 3 chrUextra 18588885 18589576 -10415080 + FB4_DM DNA Tc1 3008 3699 -390 1 726 2423 7 0 3 chrUextra 18589676 18589961 -10414695 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 1 726 3465 7 0 0 chrUextra 18589963 18590367 -10414289 - R1_DM LINE R1 0 5356 4953 1 726 990 9 0 8 chrUextra 18591258 18591376 -10413280 + R1_DM LINE R1 5240 5356 0 1 726 5035 2 0 0 chrUextra 18591374 18591949 -10412707 + LSU-rRNA_Dme rRNA rRNA 2640 3214 -686 1 726 5140 45 28 1 chrUextra 18592049 18592740 -10411916 - R1_DM LINE R1 -3940 1416 708 1 726 3977 23 110 1 chrUextra 18592840 18593531 -10411125 - R1_DM LINE R1 -1446 3910 3145 1 726 5753 19 0 0 chrUextra 18594422 18595113 -10409543 - R1_DM LINE R1 -3004 2352 1662 1 726 2260 113 39 16 chrUextra 18595213 18595904 -10408752 - DMSAT6 Satellite Satellite 0 707 1 1 726 22 56 0 0 chrUextra 18596181 18596217 -10408439 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 2880 180 8 9 chrUextra 18597586 18598238 -10406418 - SAR_DM Satellite Satellite -627 845 195 1 726 794 114 0 0 chrUextra 18598145 18598277 -10406379 + ARS406_DM Unknown Unknown 1 132 -221 1 726 662 12 12 0 chrUextra 18598379 18598461 -10406195 - ROO_I LTR Pao -565 7691 7609 1 726 5162 7 0 0 chrUextra 18598461 18599068 -10405588 - ROO_I LTR Pao -1677 6579 5973 1 726 5787 1 1 1 chrUextra 18599168 18599839 -10404817 - LSU-rRNA_Dme rRNA rRNA -1442 2458 1788 1 726 3311 7 17 19 chrUextra 18600750 18601167 -10403489 - QUASIMODO_I LTR Gypsy -5644 416 1 1 726 2296 7 0 4 chrUextra 18601167 18601441 -10403215 - QUASIMODO_LTR LTR Gypsy 0 658 386 1 726 1446 6 0 0 chrUextra 18602069 18602232 -10402424 + (CAAGA)n Simple_repeat Simple_repeat 3 165 0 1 726 5528 30 1 0 chrUextra 18602332 18603023 -10401633 - R1_DM LINE R1 -2053 3303 2612 1 726 5853 0 1 4 chrUextra 18603123 18603814 -10400842 - R1_DM LINE R1 -3273 2083 1395 1 726 6071 1 0 0 chrUextra 18603914 18604605 -10400051 + R2_DM LINE R2 2884 3574 -33 1 726 5845 3 1 1 chrUextra 18604705 18605396 -10399260 - R1_DM LINE R1 -3854 1502 812 1 726 5936 12 0 0 chrUextra 18605496 18606187 -10398469 + R2_DM LINE R2 2796 3486 -121 1 726 2911 192 6 7 chrUextra 18606287 18606975 -10397681 - SAR_DM Satellite Satellite -594 878 192 1 726 3134 39 5 2 chrUextra 18607095 18607532 -10397124 + IDEFIX_I LTR Gypsy 5154 5591 -37 1 726 1598 75 4 0 chrUextra 18607530 18607769 -10396887 + IDEFIX_LTR LTR Gypsy 40 279 -315 1 726 280 265 0 0 chrUextra 18608142 18608244 -10396412 + IDEFIX_I LTR Gypsy 4711 4812 -816 1 726 1166 7 0 0 chrUextra 18608424 18608560 -10396096 + BS2 LINE Jockey 9 144 -4577 1 726 1990 25 0 0 chrUextra 18608660 18608903 -10395753 + ROO_I LTR Pao 1435 1677 -6579 1 726 1647 123 70 3 chrUextra 18608903 18609204 -10395452 - MAX_LTR LTR Pao 0 321 1 1 726 941 73 0 0 chrUextra 18609214 18609351 -10395305 - MAX_I LTR Pao -2 7912 7776 1 726 5781 10 0 1 chrUextra 18609451 18610142 -10394514 + STALKER4_I LTR Gypsy 4421 5110 -1420 1 726 5218 13 1 0 chrUextra 18610262 18610933 -10393723 - DM176_I LTR Gypsy 0 6420 5749 1 726 2625 3 6 3 chrUextra 18611033 18611374 -10393282 + DM176_I LTR Gypsy 5667 6008 -412 1 726 2754 34 77 19 chrUextra 18611360 18611724 -10392932 + ROO_I LTR Pao 4199 4583 -3673 1 726 1835 17 17 17 chrUextra 18611851 18612091 -10392565 - NTS_DM Other Other 0 240 1 1 90 1835 17 17 17 chrUextra 18612091 18612331 -10392325 - NTS_DM Other Other 0 240 1 1 727 1290 17 22 22 chrUextra 18612331 18612515 -10392141 - NTS_DM Other Other 0 240 57 1 727 3225 182 7 6 chrUextra 18612624 18613302 -10391354 + SAR_DM Satellite Satellite 369 1047 -425 1 727 1620 0 0 0 chrUextra 18613704 18614097 -10390559 + (AATAG)n Simple_repeat Simple_repeat 1 393 0 1 727 370 0 23 0 chrUextra 18614197 18614241 -10390415 - NTS_DM Other Other -195 45 1 1 727 1930 4 17 13 chrUextra 18614241 18614480 -10390176 - NTS_DM Other Other 0 240 1 1 727 1882 13 17 13 chrUextra 18614480 18614719 -10389937 - NTS_DM Other Other 0 240 1 1 727 1154 18 24 24 chrUextra 18614719 18614888 -10389768 - NTS_DM Other Other 0 240 72 1 727 5861 3 45 1 chrUextra 18614990 18615679 -10388977 - R1_DM LINE R1 -3919 1437 719 1 727 40 21 0 0 chrUextra 18616338 18616385 -10388271 + AT_rich Low_complexity Low_complexity 1 47 0 1 727 537 14 0 0 chrUextra 18616401 18616470 -10388186 - Gypsy4_I LTR Gypsy -5911 377 309 1 727 974 87 33 0 chrUextra 18616570 18616720 -10387936 + ARS406_DM Unknown Unknown 35 189 -164 1 727 3010 192 20 3 chrUextra 18616602 18617261 -10387395 - SAR_DM Satellite Satellite -535 937 268 1 727 1093 16 0 0 chrUextra 18617361 18617488 -10387168 - R1_DM LINE R1 -522 4834 4708 1 727 5160 2 0 0 chrUextra 18617486 18618052 -10386604 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2086 1 727 6202 7 3 0 chrUextra 18618152 18618843 -10385813 + Copia2_I LTR Copia 1576 2268 -1894 1 727 3027 171 12 18 chrUextra 18618943 18619609 -10385047 - SAR_DM Satellite Satellite -616 856 195 1 727 694 119 0 8 chrUextra 18619515 18619634 -10385022 + ARS406_DM Unknown Unknown 1 118 -235 1 727 6066 6 0 1 chrUextra 18619734 18620425 -10384231 - R1_DM LINE R1 -4444 912 223 1 727 2959 25 50 0 chrUextra 18620525 18620885 -10383771 - PROTOP DNA P -4102 378 1 1 727 6110 17 0 0 chrUextra 18621316 18622007 -10382649 + R1_DM LINE R1 4016 4706 -650 1 727 1562 0 6 0 chrUextra 18622107 18622280 -10382376 + LSU-rRNA_Dme rRNA rRNA 3727 3900 0 1 727 22 56 0 0 chrUextra 18622352 18622388 -10382268 + AT_rich Low_complexity Low_complexity 1 36 0 1 727 262 150 0 0 chrUextra 18622393 18622433 -10382223 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 262 150 0 0 chrUextra 18622485 18622525 -10382131 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 262 150 0 0 chrUextra 18622577 18622617 -10382039 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 269 125 0 0 chrUextra 18622660 18622700 -10381956 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 22 56 0 0 chrUextra 18622713 18622749 -10381907 + AT_rich Low_complexity Low_complexity 1 36 0 1 727 32 0 0 0 chrUextra 18622955 18622987 -10381669 + AT_rich Low_complexity Low_complexity 1 32 0 1 727 28 48 0 0 chrUextra 18623315 18623357 -10381299 + AT_rich Low_complexity Low_complexity 1 42 0 1 727 389 296 18 18 chrUextra 18624127 18624292 -10380364 - MDG3_I LTR Gypsy -1559 3427 3263 1 727 5956 14 4 0 chrUextra 18624480 18625171 -10379485 - Gypsy4_I LTR Gypsy -1321 4967 4274 1 727 3396 166 9 9 chrUextra 18625273 18625961 -10378695 + SAR_DM Satellite Satellite 369 1056 -416 1 727 2646 83 19 9 chrUextra 18626062 18626753 -10377903 - DMSAT6 Satellite Satellite -45 698 1 1 727 6056 0 0 3 chrUextra 18626853 18627544 -10377112 - MDG3_I LTR Gypsy -1610 3376 2688 1 727 1100 88 0 0 chrUextra 18627644 18627803 -10376853 - ARS406_DM Unknown Unknown -193 160 2 1 727 2346 192 61 16 chrUextra 18627803 18628335 -10376321 + SAR_DM Satellite Satellite 1 722 -216 1 727 3040 179 10 19 chrUextra 18628436 18629126 -10375530 + SAR_DM Satellite Satellite 191 874 -598 1 727 3123 174 9 13 chrUextra 18629235 18629917 -10374739 + SAR_DM Satellite Satellite 192 870 -602 1 727 4449 4 0 6 chrUextra 18630808 18631311 -10373345 + DMRT1B LINE R1 4684 5183 0 1 727 1585 16 0 21 chrUextra 18631310 18631498 -10373158 - R1_DM LINE R1 -760 4596 4413 1 727 3109 182 12 9 chrUextra 18631599 18632288 -10372368 + SAR_DM Satellite Satellite 278 968 -504 1 727 4085 44 19 83 chrUextra 18632388 18633078 -10371578 + BATUMI_I LTR Pao 100 745 -7218 1 727 6186 0 1 4 chrUextra 18633178 18633868 -10370788 - SSU-rRNA_Dme rRNA rRNA -559 1436 749 1 727 6228 4 0 0 chrUextra 18633968 18634658 -10369998 + DOC2_DM LINE Jockey 3279 3968 -825 1 727 5653 1 5 5 chrUextra 18634758 18635404 -10369252 + LSU-rRNA_Dme rRNA rRNA 1140 1785 -2115 1 727 1459 216 42 11 chrUextra 18635877 18636238 -10368418 + HETA LINE telomeric 4020 4391 -1690 1 727 3094 179 9 9 chrUextra 18636339 18637003 -10367653 - SAR_DM Satellite Satellite -614 858 195 1 727 700 120 8 0 chrUextra 18636911 18637028 -10367628 + ARS406_DM Unknown Unknown 1 118 -235 1 727 873 0 0 0 chrUextra 18637128 18637225 -10367431 + DM176_I LTR Gypsy 6324 6420 0 1 727 2290 11 0 78 chrUextra 18637225 18637532 -10367124 + DM176_LTR LTR Gypsy 1 283 -224 1 727 2108 20 16 0 chrUextra 18637533 18637786 -10366870 + DM176_LTR LTR Gypsy 251 507 0 1 727 1493 132 57 3 chrUextra 18638047 18638329 -10366327 - DNAREP1_DM LINE Penelope -297 297 1 1 727 655 0 0 0 chrUextra 18638708 18638779 -10365877 - NTS_DM Other Other -169 71 1 1 727 1940 0 17 13 chrUextra 18638779 18639018 -10365638 - NTS_DM Other Other 0 240 1 1 727 1930 4 17 13 chrUextra 18639018 18639257 -10365399 - NTS_DM Other Other 0 240 1 1 727 888 29 28 28 chrUextra 18639257 18639398 -10365258 - NTS_DM Other Other 0 240 100 1 727 2561 212 10 14 chrUextra 18639500 18640188 -10364468 + SAR_DM Satellite Satellite 272 956 -516 1 727 416 216 0 18 chrUextra 18640288 18640401 -10364255 + XDMR_DM Unknown Unknown 250 360 0 1 727 2752 185 11 21 chrUextra 18640315 18640978 -10363678 - SAR_DM Satellite Satellite -353 1119 464 1 727 3079 164 19 19 chrUextra 18641095 18641766 -10362890 + SAR_DM Satellite Satellite 321 991 -481 1 727 5992 23 1 0 chrUextra 18641868 18642558 -10362098 - R1_DM LINE R1 -238 5118 4428 1 727 907 9 0 27 chrUextra 18642754 18642866 -10361790 + NTS_DM Other Other 25 133 -107 1 727 1541 5 20 20 chrUextra 18642866 18643069 -10361587 + NTS_DM Other Other 38 240 0 1 727 1860 17 17 13 chrUextra 18643069 18643308 -10361348 + NTS_DM Other Other 1 240 0 1 727 348 25 0 0 chrUextra 18643308 18643348 -10361308 + NTS_DM Other Other 1 40 -200 1 727 5157 32 68 14 chrUextra 18643448 18644138 -10360518 + BATUMI_I LTR Pao 2692 3418 -4545 1 727 277 54 0 0 chrUextra 18644238 18644275 -10360381 + R1_DM LINE R1 1354 1390 -3966 1 727 5431 28 21 0 chrUextra 18644276 18644928 -10359728 - FW_DM LINE Jockey -4 4688 4023 1 727 5151 7 0 2 chrUextra 18645028 18645607 -10359049 + R1_DM LINE R1 4779 5356 0 1 727 1027 9 0 0 chrUextra 18645605 18645718 -10358938 + LSU-rRNA_Dme rRNA rRNA 2640 2752 -1148 1 727 6098 12 6 0 chrUextra 18645818 18646508 -10358148 - Copia2_I LTR Copia -962 3200 2507 1 727 667 114 0 0 chrUextra 18646608 18646713 -10357943 - ARS406_DM Unknown Unknown -248 105 1 1 727 3150 179 7 9 chrUextra 18646620 18647298 -10357358 + SAR_DM Satellite Satellite 195 871 -601 1 727 2225 155 135 29 chrUextra 18647398 18648088 -10356568 - STALKER4_I LTR Gypsy -5310 1220 408 1 727 5657 19 25 25 chrUextra 18648188 18648878 -10355778 - Gypsy6_I LTR Gypsy -1250 5762 5073 1 727 771 11 0 11 chrUextra 18648978 18649068 -10355588 - NTS_DM Other Other -151 89 1 1 727 1472 20 20 20 chrUextra 18649068 18649271 -10355385 - NTS_DM Other Other 0 240 38 1 727 851 0 0 0 chrUextra 18649271 18649367 -10355289 - NTS_DM Other Other -107 133 38 1 727 870 9 9 27 chrUextra 18649367 18649478 -10355178 - NTS_DM Other Other -107 133 25 1 727 21 57 0 0 chrUextra 18649504 18649539 -10355117 + AT_rich Low_complexity Low_complexity 1 35 0 1 727 925 24 0 8 chrUextra 18649539 18649668 -10354988 - NTS_DM Other Other -39 201 74 1 727 2423 104 1 50 chrUextra 18649770 18650456 -10354200 + DMSAT6 Satellite Satellite 1 652 -82 1 727 40 67 0 0 chrUextra 18650695 18650770 -10353886 + AT_rich Low_complexity Low_complexity 1 75 0 1 727 734 104 0 0 chrUextra 18651348 18651463 -10353193 - ARS406_DM Unknown Unknown -230 123 9 1 727 3090 162 23 15 chrUextra 18651378 18652037 -10352619 + SAR_DM Satellite Satellite 195 858 -614 1 727 2398 170 13 3 chrUextra 18652138 18652828 -10351828 - SAR_DM Satellite Satellite -626 696 1 1 727 6098 3 0 0 chrUextra 18652928 18653618 -10351038 - ROO_I LTR Pao -987 7269 6580 1 727 3152 177 15 10 chrUextra 18653718 18654403 -10350253 - SAR_DM Satellite Satellite -539 933 246 1 727 238 156 0 0 chrUextra 18654363 18654408 -10350248 + ARS406_DM Unknown Unknown 1 45 -308 1 727 3154 10 65 0 chrUextra 18654508 18655198 -10349458 - DMRT1B LINE R1 -2189 2994 2260 1 727 3220 180 7 7 chrUextra 18655298 18655981 -10348675 - SAR_DM Satellite Satellite -544 928 246 1 727 270 128 0 0 chrUextra 18655941 18655988 -10348668 + ARS406_DM Unknown Unknown 1 47 -306 1 727 3302 171 7 7 chrUextra 18656088 18656770 -10347886 + SAR_DM Satellite Satellite 198 879 -593 1 727 585 42 0 0 chrUextra 18656706 18656778 -10347878 - ARS406_DM Unknown Unknown -164 189 118 1 727 1693 5 0 0 chrUextra 18656878 18657081 -10347575 + DOC LINE Jockey 4523 4725 0 1 727 4161 8 0 0 chrUextra 18657086 18657568 -10347088 + QUASIMODO_I LTR Gypsy 2408 2889 -3171 1 727 6101 16 0 0 chrUextra 18657668 18658358 -10346298 - DMRT1A LINE R1 -2669 2514 1825 1 727 291 329 27 31 chrUextra 18658808 18659146 -10345510 + BLASTOPIA_I LTR Gypsy 2178 2566 -2420 1 727 2633 178 21 8 chrUextra 18659248 18659938 -10344718 + SAR_DM Satellite Satellite 326 1215 -257 1 727 6163 3 3 3 chrUextra 18660038 18660728 -10343928 + SSU-rRNA_Dme rRNA rRNA 1083 1772 -223 1 727 3235 167 12 15 chrUextra 18660837 18661518 -10343138 + SAR_DM Satellite Satellite 191 869 -603 1 727 6173 1 0 1 chrUextra 18661618 18662308 -10342348 + FW_DM LINE Jockey 1547 2235 -2457 1 727 2403 97 26 45 chrUextra 18662412 18663077 -10341579 - DMSAT6 Satellite Satellite -29 651 1 1 727 4685 7 36 0 chrUextra 18663198 18663753 -10340903 + IDEFIX_LTR LTR Gypsy 20 594 0 1 727 3238 175 12 7 chrUextra 18663993 18664678 -10339978 - SAR_DM Satellite Satellite -535 937 250 1 727 1036 16 0 8 chrUextra 18664778 18664901 -10339755 + STALKER4_LTR LTR Gypsy 281 402 0 1 727 2942 191 0 0 chrUextra 18664928 18665468 -10339188 - ROVER-I_DM LTR Gypsy -2475 4109 3570 1 727 751 355 24 9 chrUextra 18665717 18666258 -10338398 + MICROPIA_I LTR Gypsy 907 1455 -3021 1 727 5134 21 63 9 chrUextra 18666358 18666992 -10337664 - FW_DM LINE Jockey -1892 2800 2133 1 727 516 90 0 0 chrUextra 18666981 18667048 -10337608 - R1_DM LINE R1 -4970 386 320 1 727 1354 286 21 4 chrUextra 18667149 18667682 -10336974 + ROVER-I_DM LTR Gypsy 1094 1635 -4949 1 727 392 252 10 0 chrUextra 18667710 18667813 -10336843 + ROVER-I_DM LTR Gypsy 2190 2293 -4291 1 727 5394 10 0 0 chrUextra 18667938 18668628 -10336028 + DM297_I LTR Gypsy 5469 6158 -9 1 727 2742 200 16 23 chrUextra 18668730 18669418 -10335238 + SAR_DM Satellite Satellite 1 683 -208 1 727 2084 4 0 0 chrUextra 18669518 18669758 -10334898 - SSU-rRNA_Dme rRNA rRNA -1755 240 1 1 727 32 0 0 0 chrUextra 18669890 18669922 -10334734 + AT_rich Low_complexity Low_complexity 1 32 0 1 727 5875 3 1 1 chrUextra 18671098 18671788 -10332868 + LSU-rRNA_Dme rRNA rRNA 633 1322 -2578 1 727 1641 123 0 0 chrUextra 18671890 18672133 -10332523 + Gypsy12_I LTR Gypsy 1579 1821 -3725 1 727 2914 87 58 20 chrUextra 18672130 18672578 -10332078 + Gypsy12_I LTR Gypsy 4465 4929 -617 1 727 938 290 29 29 chrUextra 18672777 18673244 -10331412 - Copia2_I LTR Copia -2242 1920 1392 1 727 3130 174 9 10 chrUextra 18673470 18674157 -10330499 - SAR_DM Satellite Satellite -435 1037 352 1 727 3158 163 10 12 chrUextra 18674259 18674948 -10329708 + SAR_DM Satellite Satellite 346 1033 -439 1 727 5536 35 0 0 chrUextra 18675048 18675738 -10328918 + NINJA_I LTR Pao 1491 2180 -3831 1 727 3382 248 16 40 chrUextra 18675838 18677298 -10327358 + SAR_DM Satellite Satellite 1 1425 -354 1 727 6000 0 4 0 chrUextra 18677418 18678108 -10326548 + LSU-rRNA_Dme rRNA rRNA 3123 3815 -85 1 727 6007 0 0 1 chrUextra 18678208 18678898 -10325758 + LSU-rRNA_Dme rRNA rRNA 2257 2945 -955 1 727 5555 16 3 3 chrUextra 18678998 18679688 -10324968 + G_DM LINE Jockey 1776 2465 -1881 1 727 2705 169 34 14 chrUextra 18679825 18680474 -10324182 + SAR_DM Satellite Satellite 242 903 -569 1 727 2189 111 10 33 chrUextra 18680578 18681268 -10323388 + DMSAT6 Satellite Satellite 1 673 0 1 727 24 0 0 0 chrUextra 18681451 18681475 -10323181 + AT_rich Low_complexity Low_complexity 1 24 0 1 727 5566 23 1 1 chrUextra 18682949 18683638 -10321018 - R1_DM LINE R1 -1467 3889 3201 1 727 5664 0 9 0 chrUextra 18683738 18684428 -10320228 + ROO_I LTR Pao 229 924 -7332 1 727 2583 187 16 25 chrUextra 18684529 18685215 -10319441 + SAR_DM Satellite Satellite 473 1152 -320 1 727 725 290 111 0 chrUextra 18685381 18685740 -10318916 + HMSBEAGLE_I LTR Gypsy 3290 3688 -2841 1 727 5372 13 0 0 chrUextra 18686108 18686740 -10317916 + BATUMI_I LTR Pao 4684 5315 -2648 1 727 417 68 0 17 chrUextra 18686738 18686798 -10317858 + BATUMI_I LTR Pao 5672 5730 -2233 1 727 5209 16 71 3 chrUextra 18687688 18688378 -10316278 - R1_DM LINE R1 -1084 4272 3536 1 727 351 85 661 14 chrUextra 18688810 18688942 -10315714 - HMSBEAGLE_I LTR Gypsy -6308 221 1 1 727 908 177 97 15 chrUextra 18688941 18689147 -10315509 - DMLTR5 LTR Gypsy 0 266 44 1 727 2934 179 15 9 chrUextra 18689272 18689956 -10314700 - SAR_DM Satellite Satellite -593 879 192 1 727 2579 183 22 31 chrUextra 18690060 18690747 -10313909 + SAR_DM Satellite Satellite 479 1159 -313 1 727 2292 103 3 46 chrUextra 18690848 18691538 -10313118 - DMSAT6 Satellite Satellite -86 659 1 1 727 487 44 0 0 chrUextra 18691638 18691706 -10312950 + FW_DM LINE Jockey 1457 1524 -3168 1 727 5193 11 2 0 chrUextra 18691700 18692328 -10312328 + FW_DM LINE Jockey 2575 3203 -1489 1 727 6035 0 0 1 chrUextra 18692428 18693118 -10311538 - GTWIN_I LTR Gypsy -1296 5125 4437 1 727 2624 202 18 23 chrUextra 18693219 18693908 -10310748 + SAR_DM Satellite Satellite 1 684 -227 1 727 3067 179 9 7 chrUextra 18694009 18694697 -10309959 - SAR_DM Satellite Satellite -458 1014 326 1 727 2888 179 10 13 chrUextra 18694806 18695487 -10309169 + SAR_DM Satellite Satellite 195 873 -599 1 727 3798 33 10 4 chrUextra 18695588 18696072 -10308584 + DMRT1B LINE R1 4697 5183 0 1 727 192 40 0 0 chrUextra 18696081 18696106 -10308550 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 727 3141 25 18 31 chrUextra 18696378 18696889 -10307767 - ROO_I LTR Pao -7645 611 1 1 727 1423 45 0 0 chrUextra 18696889 18697068 -10307588 - ROO_LTR LTR Pao 0 428 250 1 727 846 79 0 0 chrUextra 18697168 18697294 -10307362 - ARS406_DM Unknown Unknown -227 126 1 1 727 2908 171 9 9 chrUextra 18697198 18697858 -10306798 + SAR_DM Satellite Satellite 192 851 -621 1 727 363 0 66 49 chrUextra 18697958 18698019 -10306637 + NTS_DM Other Other 179 240 0 1 727 1704 21 17 21 chrUextra 18698019 18698260 -10306396 + NTS_DM Other Other 1 240 0 1 727 1734 21 17 17 chrUextra 18698260 18698500 -10306156 + NTS_DM Other Other 1 240 0 1 727 1204 14 0 0 chrUextra 18698500 18698647 -10306009 + NTS_DM Other Other 1 147 -93 1 727 5390 23 58 0 chrUextra 18698750 18699438 -10305218 + Gypsy4_I LTR Gypsy 1031 1758 -4530 1 727 5338 18 0 16 chrUextra 18699538 18700228 -10304428 + CIRCE LINE Composite 4204 4882 -1474 1 727 861 183 102 15 chrUextra 18700620 18700825 -10303831 + DMLTR5 LTR Gypsy 44 266 0 1 727 351 49 65 16 chrUextra 18700824 18700886 -10303770 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 727 249 128 0 21 chrUextra 18700908 18700956 -10303700 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 727 248 0 77 0 chrUextra 18701118 18701157 -10303499 + R1_DM LINE R1 5315 5356 0 1 727 5716 1 0 0 chrUextra 18701155 18701808 -10302848 + LSU-rRNA_Dme rRNA rRNA 2640 3292 -608 1 727 648 0 0 0 chrUextra 18701908 18701980 -10302676 + (CTATT)n Simple_repeat Simple_repeat 2 73 0 1 727 5713 0 3 0 chrUextra 18702699 18703388 -10301268 + STALKER4_I LTR Gypsy 2880 3570 -2960 1 727 5711 16 0 4 chrUextra 18703488 18704178 -10300478 + MICROPIA_I LTR Gypsy 3431 4117 -359 1 727 1649 144 9 9 chrUextra 18704278 18704608 -10300048 - SAR_DM Satellite Satellite -817 655 326 1 727 2871 0 3 0 chrUextra 18704615 18704968 -10299688 - DOC LINE Jockey 0 4725 4372 1 727 5543 29 6 0 chrUextra 18705068 18705758 -10298898 - R1_DM LINE R1 -2189 3167 2474 1 727 21 89 0 0 chrUextra 18706259 18706315 -10298341 + AT_rich Low_complexity Low_complexity 1 56 0 1 727 1856 0 5 0 chrUextra 18706334 18706548 -10298108 - SSU-rRNA_Dme rRNA rRNA 0 1995 1781 1 727 5659 25 0 0 chrUextra 18706648 18707338 -10297318 - R1_DM LINE R1 -1781 3575 2886 1 727 2720 61 11 8 chrUextra 18707438 18707827 -10296829 + BATUMI_I LTR Pao 6097 6420 -1543 1 727 2636 21 3 18 chrUextra 18707787 18708128 -10296528 - BATUMI_I LTR Pao -962 7001 6666 1 727 5150 49 18 1 chrUextra 18708228 18708905 -10295751 + R1_DM LINE R1 930 1617 -3739 1 727 4728 107 0 0 chrUextra 18709018 18709702 -10294954 + HMSBEAGLE_I LTR Gypsy 4906 5589 -940 1 727 5985 0 3 1 chrUextra 18709808 18710498 -10294158 - LSU-rRNA_Dme rRNA rRNA -61 3839 3149 1 727 1176 0 0 0 chrUextra 18710600 18710735 -10293921 + 5S_DM RNA RNA 1 135 0 1 727 1137 8 0 7 chrUextra 18710966 18711102 -10293554 + 5S_DM RNA RNA 1 135 0 1 727 5555 32 0 0 chrUextra 18711388 18712076 -10292580 + R1_DM LINE R1 2208 2895 -2461 1 727 314 328 16 11 chrUextra 18712416 18712607 -10292049 + BLASTOPIA_I LTR Gypsy 3541 3732 -749 1 727 669 115 0 0 chrUextra 18712968 18713081 -10291575 - ARS406_DM Unknown Unknown -240 113 1 1 727 2743 187 6 10 chrUextra 18712988 18713658 -10290998 + SAR_DM Satellite Satellite 195 861 -611 1 727 5817 7 7 0 chrUextra 18713758 18714448 -10290208 - R2_DM LINE R2 -2411 1196 502 1 727 4595 0 0 0 chrUextra 18714554 18715083 -10289573 - ACCORD_LTR LTR Gypsy -29 529 1 1 727 1309 7 0 0 chrUextra 18715083 18715238 -10289418 + Invader2_I LTR Gypsy 620 774 -3818 1 727 3649 7 0 0 chrUextra 18715338 18715757 -10288899 - Invader1_I LTR Gypsy -2767 419 1 1 727 2275 11 4 0 chrUextra 18715757 18716028 -10288628 - Invader1_LTR LTR Gypsy 0 423 152 1 727 5222 12 25 0 chrUextra 18716128 18716818 -10287838 - QUASIMODO_I LTR Gypsy -361 5699 4993 1 727 3400 201 0 4 chrUextra 18716922 18717608 -10287048 - ROVER-I_DM LTR Gypsy -3326 3258 2576 1 727 602 0 0 14 chrUextra 18717708 18717782 -10286874 - NTS_DM Other Other -130 110 38 1 727 870 9 0 27 chrUextra 18717782 18717894 -10286762 - NTS_DM Other Other -107 133 25 1 727 1252 18 0 6 chrUextra 18717946 18718111 -10286545 - NTS_DM Other Other -39 201 38 1 727 870 9 0 27 chrUextra 18718111 18718223 -10286433 - NTS_DM Other Other -107 133 25 1 727 22 56 0 0 chrUextra 18718249 18718285 -10286371 + AT_rich Low_complexity Low_complexity 1 36 0 1 727 255 125 0 0 chrUextra 18718298 18718338 -10286318 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 727 5845 1 3 6 chrUextra 18718498 18719188 -10285468 + SSU-rRNA_Dme rRNA rRNA 1075 1762 -233 1 727 2969 238 23 43 chrUextra 18719293 18720763 -10283893 + SAR_DM Satellite Satellite 1 1440 -680 1 727 5964 0 28 0 chrUextra 18720868 18721558 -10283098 + R2_DM LINE R2 1544 2252 -1355 1 727 5768 7 10 0 chrUextra 18721658 18722348 -10282308 - QUASIMODO_I LTR Gypsy -1493 4567 3871 1 727 21 89 0 0 chrUextra 18722516 18722572 -10282084 + AT_rich Low_complexity Low_complexity 1 56 0 1 727 1946 168 24 10 chrUextra 18723239 18723649 -10281007 + SAR_DM Satellite Satellite 616 1031 -441 1 727 1278 161 11 8 chrUextra 18723666 18723928 -10280728 + SAR_DM Satellite Satellite 399 661 -811 1 727 473 198 0 10 chrUextra 18724028 18724125 -10280531 - HETRP_DM Satellite Satellite -248 1624 1529 1 727 672 200 14 14 chrUextra 18724268 18724415 -10280241 - HETRP_DM Satellite Satellite -197 1675 1529 1 727 530 238 8 16 chrUextra 18724560 18724688 -10279968 - HETRP_DM Satellite Satellite -197 1675 1549 1 727 210 37 0 0 chrUextra 18724688 18724715 -10279941 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 727 1258 20 0 7 chrUextra 18724818 18724972 -10279684 - NTS_DM Other Other -87 153 1 1 727 1813 21 17 17 chrUextra 18724972 18725212 -10279444 - NTS_DM Other Other 0 240 1 1 727 1472 20 20 20 chrUextra 18725212 18725415 -10279241 - NTS_DM Other Other 0 240 38 1 727 757 11 0 11 chrUextra 18725415 18725508 -10279148 - NTS_DM Other Other -107 133 42 1 727 5659 16 6 0 chrUextra 18725608 18726298 -10278358 - STALKER4_I LTR Gypsy -203 6327 5634 1 727 3894 7 0 0 chrUextra 18726398 18726831 -10277825 - LSU-rRNA_Dme rRNA rRNA -890 3010 2578 1 727 2357 4 0 0 chrUextra 18726827 18727088 -10277568 - R2_DM LINE R2 -6 3601 3341 1 727 1849 64 12 0 chrUextra 18727188 18727438 -10277218 - R1_DM LINE R1 -5103 253 1 1 727 3403 25 2 7 chrUextra 18727471 18727878 -10276778 - R1_DM LINE R1 0 5356 4952 1 727 3153 7 138 1 chrUextra 18727978 18728668 -10275988 + Gypsy4_I LTR Gypsy 5163 5946 -342 1 727 1420 13 0 0 chrUextra 18728768 18728925 -10275731 - LSU-rRNA_Dme rRNA rRNA -1166 2734 2578 1 727 4809 6 0 0 chrUextra 18728927 18729458 -10275198 - R2_DM LINE R2 0 3607 3077 1 727 5920 14 6 0 chrUextra 18729558 18730248 -10274408 + ROO_I LTR Pao 2424 3117 -5139 1 727 344 265 114 96 chrUextra 18730467 18730747 -10273909 - Invader1_LTR LTR Gypsy -55 368 84 1 727 6262 6 1 0 chrUextra 18731138 18731828 -10272828 - LSU-rRNA_Dme rRNA rRNA -272 3628 2938 1 727 791 100 46 0 chrUextra 18731928 18732058 -10272598 - ARS406_DM Unknown Unknown -217 136 1 1 727 3054 170 18 14 chrUextra 18731951 18732607 -10272049 + SAR_DM Satellite Satellite 179 837 -635 1 727 231 61 30 0 chrUextra 18732585 18732618 -10272038 - ARS406_DM Unknown Unknown -164 189 156 1 727 5895 17 12 0 chrUextra 18732718 18733408 -10271248 + FW_DM LINE Jockey 2300 2997 -1695 1 727 2592 7 3 0 chrUextra 18733508 18733796 -10270860 - LSU-rRNA_Dme rRNA rRNA -1034 2866 2578 1 727 3606 5 0 0 chrUextra 18733799 18734198 -10270458 - R2_DM LINE R2 0 3607 3209 1 727 5901 29 0 1 chrUextra 18734298 18734988 -10269668 - R1_DM LINE R1 -1748 3608 2920 1 727 5805 12 0 0 chrUextra 18735088 18735778 -10268878 - QUASIMODO_I LTR Gypsy -1320 4740 4051 1 727 780 11 0 0 chrUextra 18735878 18735967 -10268689 - 5S_DM RNA RNA -46 89 1 1 727 1167 8 8 0 chrUextra 18736201 18736335 -10268321 - 5S_DM RNA RNA 0 135 1 1 727 3338 163 10 9 chrUextra 18736684 18737358 -10267298 + SAR_DM Satellite Satellite 332 1006 -466 1 727 5122 42 48 1 chrUextra 18737461 18738111 -10266545 - DMRT1C LINE R1 -105 5338 4659 1 727 266 81 0 0 chrUextra 18738109 18738146 -10266510 - DMRT1C LINE R1 -965 4478 4442 1 727 445 31 0 15 chrUextra 18738250 18738316 -10266340 + NTS_DM Other Other 137 201 -39 1 727 907 9 0 27 chrUextra 18738368 18738480 -10266176 + NTS_DM Other Other 25 133 -107 1 727 1287 24 0 6 chrUextra 18738480 18738645 -10266011 + NTS_DM Other Other 38 201 -39 1 727 21 57 0 0 chrUextra 18738645 18738680 -10265976 + AT_rich Low_complexity Low_complexity 1 35 0 1 727 840 9 9 36 chrUextra 18738706 18738818 -10265838 + NTS_DM Other Other 25 133 -107 1 727 851 0 0 0 chrUextra 18738818 18738914 -10265742 + NTS_DM Other Other 38 133 -107 1 727 694 120 0 8 chrUextra 18739038 18739156 -10265500 - ARS406_DM Unknown Unknown -236 117 1 1 727 3048 179 9 9 chrUextra 18739062 18739726 -10264930 + SAR_DM Satellite Satellite 195 858 -614 1 727 6077 13 0 0 chrUextra 18739828 18740518 -10264138 - FW_DM LINE Jockey -3554 1138 449 1 727 6023 1 0 3 chrUextra 18740618 18741308 -10263348 + QUASIMODO_I LTR Gypsy 2202 2889 -3171 1 727 3338 161 17 9 chrUextra 18741408 18742096 -10262560 - SAR_DM Satellite Satellite -400 1072 379 1 727 4969 38 115 4 chrUextra 18742198 18742886 -10261770 - TRANSIB2 DNA Transib -1202 1642 879 1 90 4595 31 35 5 chrUextra 18742990 18743567 -10261089 - PROTOP_A DNA P -511 594 1 1 728 5812 0 6 4 chrUextra 18743778 18744468 -10260188 + MAX_I LTR Pao 529 1219 -6695 1 728 6041 1 0 0 chrUextra 18744568 18745258 -10259398 + DM176_I LTR Gypsy 1890 2579 -3841 1 728 1934 29 0 0 chrUextra 18745358 18745596 -10259060 + PROTOP_A DNA P 388 625 -480 1 728 2535 38 3 25 chrUextra 18745596 18745919 -10258737 - NINJA_LTR LTR Pao -1 316 1 1 728 1077 39 0 0 chrUextra 18745919 18746048 -10258608 - NINJA_I LTR Pao 0 6011 5883 1 728 276 203 16 0 chrUextra 18746148 18746212 -10258444 + XDMR Unknown Unknown 297 361 0 1 728 2909 188 9 21 chrUextra 18746157 18746838 -10257818 - SAR_DM Satellite Satellite -353 1119 447 1 728 240 122 49 0 chrUextra 18747280 18747321 -10257335 + PROTOP DNA P 873 915 -3565 1 728 488 168 0 0 chrUextra 18747320 18747415 -10257241 + PROTOP DNA P 3959 4053 -427 1 728 532 184 73 0 chrUextra 18747425 18747561 -10257095 + PROTOP_A DNA P 762 905 -200 1 728 2075 283 16 7 chrUextra 18747729 18748405 -10256251 - FROGGER_I LTR Copia -334 1743 1062 1 728 369 183 14 0 chrUextra 18748518 18748589 -10256067 + Gypsy12A_LTR LTR Gypsy 2191 2262 -18 1 728 929 199 268 46 chrUextra 18748606 18748975 -10255681 + TART LINE telomeric 10041 10491 -3986 1 728 517 32 0 0 chrUextra 18749146 18749208 -10255448 + PROTOP_B DNA P 1 62 -1091 1 728 2828 198 13 28 chrUextra 18749311 18749998 -10254658 + SAR_DM Satellite Satellite 1 677 -208 1 728 28 48 0 0 chrUextra 18750139 18750181 -10254475 + AT_rich Low_complexity Low_complexity 1 42 0 1 728 514 119 36 0 chrUextra 18750454 18750538 -10254118 - NTS_DM Other Other -150 90 4 1 728 1111 7 0 21 chrUextra 18750648 18750788 -10253868 - NTS_DM Other Other -78 162 26 1 728 5807 10 9 4 chrUextra 18750890 18751578 -10253078 + DM176_I LTR Gypsy 479 1169 -5251 1 728 3200 177 9 7 chrUextra 18751685 18752368 -10252288 + SAR_DM Satellite Satellite 195 878 -594 1 728 2252 4 0 0 chrUextra 18752468 18752717 -10251939 - SSU-rRNA_Dme rRNA rRNA -1746 249 1 1 728 32 0 0 0 chrUextra 18752849 18752881 -10251775 + AT_rich Low_complexity Low_complexity 1 32 0 1 728 3154 172 12 9 chrUextra 18753260 18753927 -10250729 - SAR_DM Satellite Satellite -478 994 326 1 728 5695 0 2 2 chrUextra 18754048 18754675 -10249981 + SSU-rRNA_Dme rRNA rRNA 1369 1995 0 1 728 6089 3 1 4 chrUextra 18754838 18755528 -10249128 + R1_DM LINE R1 4373 5060 -296 1 728 5144 77 30 0 chrUextra 18755630 18756318 -10248338 - TART_B1 LINE telomeric -7289 3365 2657 1 728 1099 308 33 28 chrUextra 18756418 18756993 -10247663 + HMSBEAGLE_I LTR Gypsy 4186 4763 -1766 1 728 353 301 0 0 chrUextra 18756995 18757108 -10247548 + HMSBEAGLE_I LTR Gypsy 5207 5319 -1210 1 728 6251 1 1 0 chrUextra 18757208 18757898 -10246758 - R1_DM LINE R1 -2810 2546 1856 1 728 6265 0 0 0 chrUextra 18757998 18758688 -10245968 - G_DM LINE Jockey -785 3561 2872 1 728 32 0 0 0 chrUextra 18758915 18758947 -10245709 + AT_rich Low_complexity Low_complexity 1 32 0 1 728 28 48 0 0 chrUextra 18759275 18759317 -10245339 + AT_rich Low_complexity Low_complexity 1 42 0 1 728 1961 5 5 0 chrUextra 18759579 18759802 -10244854 - DIVER_LTR LTR Pao 0 224 1 1 728 4259 2 0 0 chrUextra 18759802 18760268 -10244388 - DIVER_I LTR Pao 0 5643 5178 1 728 366 0 23 0 chrUextra 18760368 18760411 -10244245 + ROO_I LTR Pao 8213 8256 0 1 728 3901 0 0 2 chrUextra 18760411 18760840 -10243816 + ROO_LTR LTR Pao 1 428 0 1 728 5687 0 0 38 chrUextra 18761157 18761846 -10242810 - LSU-rRNA_Dme rRNA rRNA -3111 789 127 1 728 1348 0 0 0 chrUextra 18761946 18762095 -10242561 - LSU-rRNA_Dme rRNA rRNA -3751 149 1 1 728 21 95 0 0 chrUextra 18762107 18762170 -10242486 + AT_rich Low_complexity Low_complexity 1 63 0 1 728 34 24 0 0 chrUextra 18762383 18762424 -10242232 + AT_rich Low_complexity Low_complexity 1 41 0 1 728 2895 0 3 3 chrUextra 18762737 18763058 -10241598 + SSU-rRNA_Dme rRNA rRNA 1675 1995 0 1 728 21 89 0 0 chrUextra 18763077 18763133 -10241523 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 279 0 0 0 chrUextra 18763524 18763555 -10241101 + (TTCTC)n Simple_repeat Simple_repeat 5 35 0 1 728 192 40 0 0 chrUextra 18763562 18763587 -10241069 + (GAGAA)n Simple_repeat Simple_repeat 4 28 0 1 728 2581 89 10 50 chrUextra 18764313 18765001 -10239655 - DMSAT6 Satellite Satellite -33 660 1 1 728 3111 172 9 28 chrUextra 18765104 18765791 -10238865 - SAR_DM Satellite Satellite -369 1103 430 1 728 3324 168 7 7 chrUextra 18765894 18766572 -10238084 + SAR_DM Satellite Satellite 399 1076 -396 1 728 5022 42 2 0 chrUextra 18766680 18767279 -10237377 - Baggins1 LINE LOA -63 5390 4791 1 728 5672 2 0 36 chrUextra 18767469 18768158 -10236498 + LSU-rRNA_Dme rRNA rRNA 78 741 -3159 1 728 212 31 62 0 chrUextra 18768271 18768303 -10236353 + (TAAAG)n Simple_repeat Simple_repeat 2 35 0 1 728 6260 3 0 0 chrUextra 18769047 18769736 -10234920 - DOC LINE Jockey -490 4235 3547 1 728 3024 50 2 19 chrUextra 18769836 18770243 -10234413 + STALKER4_LTR LTR Gypsy 35 399 -3 1 728 31 58 0 0 chrUextra 18770331 18770383 -10234273 + AT_rich Low_complexity Low_complexity 1 52 0 1 728 655 201 0 0 chrUextra 18770384 18770523 -10234133 + STALKER4_I LTR Gypsy 235 373 -6157 1 728 6076 1 6 3 chrUextra 18770625 18771314 -10233342 - LSU-rRNA_Dme rRNA rRNA -2161 1739 1049 1 728 2155 304 3 1 chrUextra 18771438 18772101 -10232555 - Invader1_I LTR Gypsy -922 2264 1601 1 728 3309 20 5 15 chrUextra 18772203 18772611 -10232045 + BATUMI_I LTR Pao 6598 7001 -962 1 728 2297 8 0 0 chrUextra 18772637 18772892 -10231764 - BATUMI_I LTR Pao -1543 6420 6166 1 728 5378 61 1 6 chrUextra 18772992 18773681 -10230975 - BATUMI_I LTR Pao -3854 4109 3424 1 728 622 142 0 0 chrUextra 18773781 18773887 -10230769 - ARS406_DM Unknown Unknown -247 106 1 1 728 3033 187 13 9 chrUextra 18773794 18774470 -10230186 + SAR_DM Satellite Satellite 195 873 -599 1 728 2376 130 7 21 chrUextra 18774579 18775257 -10229399 + DMSAT6 Satellite Satellite 1 668 -3 1 728 3157 169 13 23 chrUextra 18775359 18776048 -10228608 - SAR_DM Satellite Satellite -372 1100 419 1 728 6230 1 0 0 chrUextra 18776148 18776837 -10227819 + DOC LINE Jockey 3117 3805 -920 1 728 6266 3 0 0 chrUextra 18776937 18777626 -10227030 + LSU-rRNA_Dme rRNA rRNA 1869 2557 -1343 1 728 2399 8 0 0 chrUextra 18777726 18777991 -10226665 - R1_DM LINE R1 -384 4972 4708 1 728 3992 0 0 0 chrUextra 18777989 18778415 -10226241 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2226 1 728 5852 35 1 0 chrUextra 18779304 18779993 -10224663 - R1_DM LINE R1 -687 4669 3980 1 728 2914 0 3 0 chrUextra 18780093 18780406 -10224250 + SSU-rRNA_Dme rRNA rRNA 1682 1995 0 1 728 21 89 0 0 chrUextra 18780425 18780481 -10224175 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 6107 3 1 0 chrUextra 18780882 18781571 -10223085 + HMSBEAGLE_I LTR Gypsy 56 745 -5784 1 728 1184 24 24 24 chrUextra 18782460 18782629 -10222027 + NTS_DM Other Other 72 240 0 1 728 1995 4 17 13 chrUextra 18782629 18782868 -10221788 + NTS_DM Other Other 1 240 0 1 728 1973 8 17 13 chrUextra 18782868 18783107 -10221549 + NTS_DM Other Other 1 240 0 1 728 392 0 0 0 chrUextra 18783107 18783149 -10221507 + NTS_DM Other Other 1 42 -198 1 728 4857 0 0 0 chrUextra 18783249 18783767 -10220889 + R2_DM LINE R2 3090 3607 0 1 728 1615 11 0 0 chrUextra 18783763 18783938 -10220718 + LSU-rRNA_Dme rRNA rRNA 2578 2752 -1148 1 728 5917 30 0 0 chrUextra 18784827 18785516 -10219140 + MDG1_I LTR Gypsy 3315 4003 -2593 1 728 792 21 11 0 chrUextra 18785616 18785710 -10218946 + ACCORD2_LTR LTR Gypsy 120 214 -1 1 728 5003 37 0 0 chrUextra 18785711 18786305 -10218351 + R1_DM LINE R1 2422 3015 -2341 1 728 662 53 21 0 chrUextra 18786405 18786499 -10218157 + (CTTAT)n Simple_repeat Simple_repeat 3 98 0 1 728 1203 15 0 0 chrUextra 18787314 18787449 -10217207 - 5S_DM RNA RNA 0 135 1 1 728 1226 15 0 0 chrUextra 18787673 18787808 -10216848 - 5S_DM RNA RNA 0 135 1 1 728 5997 13 1 1 chrUextra 18787983 18788672 -10215984 - R1_DM LINE R1 -1176 4180 3492 1 728 2048 41 30 0 chrUextra 18788772 18789043 -10215613 + PROTOP_A DNA P 235 513 -592 1 728 28 71 0 0 chrUextra 18789182 18789238 -10215418 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 23 68 0 0 chrUextra 18789284 18789328 -10215328 + AT_rich Low_complexity Low_complexity 1 44 0 1 728 21 89 0 0 chrUextra 18789366 18789422 -10215234 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 5811 26 46 0 chrUextra 18790350 18791039 -10213617 - R1_DM LINE R1 -3145 2211 1491 1 728 925 301 37 37 chrUextra 18791151 18791451 -10213205 + DM297_I LTR Gypsy 2372 2785 -3382 1 728 1651 19 19 0 chrUextra 18791451 18791665 -10212991 + TLD2 Unknown Unknown 1 218 0 1 728 925 301 37 37 chrUextra 18791665 18791812 -10212844 + DM297_I LTR Gypsy 2786 2991 -3176 1 728 5066 53 13 23 chrUextra 18791928 18792617 -10212039 - R1_DM LINE R1 -4276 1080 399 1 728 5804 34 4 1 chrUextra 18792717 18793406 -10211250 - R1_DM LINE R1 -302 5054 4364 1 728 221 208 38 0 chrUextra 18794081 18794134 -10210522 + (CATA)n Simple_repeat Simple_repeat 1 55 0 1 728 3026 188 19 16 chrUextra 18794295 18794976 -10209680 + SAR_DM Satellite Satellite 437 1119 -353 1 728 261 197 33 0 chrUextra 18794923 18794984 -10209672 - XDMR Unknown Unknown 0 361 299 1 728 2233 8 0 0 chrUextra 18795084 18795327 -10209329 + R1_DM LINE R1 5114 5356 0 1 728 3191 63 5 7 chrUextra 18795359 18795773 -10208883 + R1_DM LINE R1 1 413 -4943 1 728 1801 29 0 0 chrUextra 18795877 18796083 -10208573 + R1_DM LINE R1 5151 5356 0 1 728 3410 68 14 5 chrUextra 18796116 18796562 -10208094 + R1_DM LINE R1 1 450 -4906 1 728 3428 162 22 7 chrUextra 18796668 18797351 -10207305 + SAR_DM Satellite Satellite 326 1018 -454 1 728 454 122 0 13 chrUextra 18797554 18797629 -10207027 + DIVER_LTR LTR Pao 151 224 0 1 728 4144 16 2 0 chrUextra 18797650 18798140 -10206516 + PROTOP_A DNA P 221 711 -394 1 728 5964 10 1 13 chrUextra 18798243 18798926 -10205730 + Gypsy6_I LTR Gypsy 1443 2117 -4895 1 728 5815 32 1 0 chrUextra 18799818 18800507 -10204149 - MDG1_I LTR Gypsy -3771 2825 2136 1 728 6285 10 0 1 chrUextra 18800607 18801296 -10203360 + Gypsy6_I LTR Gypsy 4413 5100 -1912 1 728 3138 171 18 16 chrUextra 18801397 18802079 -10202577 - SAR_DM Satellite Satellite -610 862 180 1 728 3026 196 16 7 chrUextra 18802185 18802874 -10201782 - SAR_DM Satellite Satellite -396 1076 382 1 728 1371 23 119 6 chrUextra 18802974 18803150 -10201506 - DOC2_DM LINE Jockey -4588 205 10 1 728 2779 151 8 4 chrUextra 18803163 18803661 -10200995 + SAR_DM Satellite Satellite 380 879 -593 1 728 332 324 51 51 chrUextra 18803993 18804347 -10200309 + Invader3_I LTR Gypsy 2676 3029 -1859 1 728 6203 14 0 0 chrUextra 18804553 18805241 -10199415 + Gypsy_I LTR Gypsy 5779 6466 -41 1 728 5750 31 1 1 chrUextra 18805354 18806030 -10198626 - FW_DM LINE Jockey 0 4692 4017 1 728 1620 3 0 0 chrUextra 18806130 18806468 -10198188 + (TCTA)n Simple_repeat Simple_repeat 1 338 0 1 728 2488 100 30 25 chrUextra 18806919 18807608 -10197048 + DMSAT6 Satellite Satellite 1 692 -29 1 728 577 221 71 0 chrUextra 18807708 18807848 -10196808 - HETRP_DM Satellite Satellite -205 1667 1518 1 728 388 204 87 10 chrUextra 18807982 18808086 -10196570 + DNAREP1_DM LINE Penelope 67 178 -416 1 728 408 132 237 21 chrUextra 18808304 18808397 -10196259 + ROVER-LTR_DM LTR Gypsy 7 119 -248 1 728 6041 18 4 0 chrUextra 18808498 18809180 -10195476 + R1_DM LINE R1 1744 2428 -2928 1 728 2654 114 30 14 chrUextra 18809290 18809973 -10194683 - DMSAT6 Satellite Satellite -28 693 1 1 728 1699 103 43 14 chrUextra 18810075 18810352 -10194304 - MDG1_I LTR Gypsy -6311 285 1 1 728 2042 94 74 3 chrUextra 18810352 18810650 -10194006 - MDG1_LTR LTR Gypsy -30 412 94 1 728 339 105 0 0 chrUextra 18810652 18810709 -10193947 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 728 1284 271 26 28 chrUextra 18810899 18811552 -10193104 - STALKER4_I LTR Gypsy -3050 3480 2829 1 728 813 37 0 115 chrUextra 18811700 18811822 -10192834 - Baggins1 LINE LOA 0 5453 5346 1 728 27 29 0 0 chrUextra 18812145 18812179 -10192477 + AT_rich Low_complexity Low_complexity 1 34 0 1 728 938 183 102 15 chrUextra 18812847 18813052 -10191604 + DMLTR5 LTR Gypsy 44 266 0 1 728 376 49 65 16 chrUextra 18813051 18813113 -10191543 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 728 3167 185 9 17 chrUextra 18813231 18813920 -10190736 + SAR_DM Satellite Satellite 425 1107 -365 1 728 3024 195 9 17 chrUextra 18814020 18814708 -10189948 - SAR_DM Satellite Satellite -366 1106 425 1 728 5727 0 0 0 chrUextra 18814809 18815498 -10189158 - QUASIMODO_I LTR Gypsy -81 5979 5291 1 728 6174 16 0 4 chrUextra 18815598 18816287 -10188369 + Gypsy4_I LTR Gypsy 535 1220 -5068 1 728 6236 6 0 0 chrUextra 18816387 18817076 -10187580 + R1_DM LINE R1 1149 1837 -3519 1 728 2688 160 138 18 chrUextra 18817190 18817864 -10186792 - TART LINE telomeric -4745 9732 8978 1 728 4262 53 12 102 chrUextra 18817965 18818654 -10186002 + MDG1_I LTR Gypsy 1021 1647 -4949 1 728 1617 0 6 0 chrUextra 18818754 18818929 -10185727 + LSU-rRNA_Dme rRNA rRNA 3725 3900 0 1 728 268 196 0 19 chrUextra 18819030 18819082 -10185574 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 268 196 0 19 chrUextra 18819122 18819174 -10185482 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 268 196 0 19 chrUextra 18819214 18819266 -10185390 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 278 176 0 19 chrUextra 18819297 18819349 -10185307 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 22 56 0 0 chrUextra 18819362 18819398 -10185258 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 766 193 0 7 chrUextra 18819755 18819901 -10184755 + DMLTR5 LTR Gypsy 122 266 0 1 728 376 49 65 16 chrUextra 18819900 18819962 -10184694 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 728 285 106 0 21 chrUextra 18819984 18820032 -10184624 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 728 646 27 0 0 chrUextra 18820332 18820406 -10184250 + ARS406_DM Unknown Unknown 116 189 -164 1 728 2602 180 71 34 chrUextra 18820343 18821021 -10183635 - SAR_DM Satellite Satellite -242 1230 528 1 728 5989 25 0 0 chrUextra 18821121 18821810 -10182846 - R1_DM LINE R1 -1750 3606 2918 1 728 6085 20 6 0 chrUextra 18821910 18822599 -10182057 - BURDOCK_I LTR Gypsy -2320 3540 2848 1 728 3509 164 10 9 chrUextra 18822699 18823388 -10181268 - SAR_DM Satellite Satellite -399 1073 384 1 728 614 166 371 0 chrUextra 18823501 18823679 -10180977 + Gypsy_I LTR Gypsy 5906 6149 -358 1 728 6210 0 3 1 chrUextra 18825066 18825755 -10178901 - R1_DM LINE R1 -3569 1787 1098 1 728 5865 14 12 3 chrUextra 18825855 18826544 -10178112 - R1_DM LINE R1 -1237 4119 3425 1 728 5804 47 0 1 chrUextra 18826644 18827333 -10177323 + BS2 LINE Jockey 3458 4145 -576 1 728 6307 0 1 0 chrUextra 18827433 18828122 -10176534 - ROO_I LTR Pao -5778 2478 1789 1 728 6199 4 1 1 chrUextra 18828222 18828911 -10175745 + R1_DM LINE R1 3641 4329 -1027 1 728 773 115 8 0 chrUextra 18829011 18829133 -10175523 - ARS406_DM Unknown Unknown -230 123 1 1 728 3208 267 38 49 chrUextra 18829027 18830479 -10174177 + SAR_DM Satellite Satellite 1 1436 -620 1 728 746 71 0 0 chrUextra 18830390 18830489 -10174167 - ARS406_DM Unknown Unknown -164 189 91 1 728 6323 1 1 3 chrUextra 18830589 18831278 -10173378 - SSU-rRNA_Dme rRNA rRNA -409 1586 899 1 728 3304 174 10 12 chrUextra 18831378 18832063 -10172593 + SAR_DM Satellite Satellite 275 958 -514 1 728 5785 20 3 6 chrUextra 18832167 18832856 -10171800 + STALKER4_I LTR Gypsy 1187 1873 -4657 1 728 862 102 0 0 chrUextra 18832957 18833085 -10171571 - ARS406_DM Unknown Unknown -225 128 1 1 728 3060 177 27 12 chrUextra 18832979 18833642 -10171014 + SAR_DM Satellite Satellite 180 852 -620 1 728 462 122 19 0 chrUextra 18833756 18833800 -10170856 - ACCORD2_I LTR Gypsy -6023 1189 1144 1 728 228 86 0 0 chrUextra 18833800 18833835 -10170821 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1 728 462 122 19 0 chrUextra 18833835 18833897 -10170759 - ACCORD2_I LTR Gypsy -6069 1143 1082 1 728 3839 6 2 63 chrUextra 18833897 18834404 -10170252 + MICROPIA_LTR LTR Gypsy 1 476 0 1 728 260 0 0 0 chrUextra 18834404 18834434 -10170222 + MICROPIA_I LTR Gypsy 1 30 -4446 1 728 3843 0 0 0 chrUextra 18834534 18835009 -10169647 + DM176_I LTR Gypsy 5946 6420 0 1 728 1766 5 0 5 chrUextra 18835009 18835223 -10169433 + DM176_LTR LTR Gypsy 1 213 -294 1 728 5244 1 12 9 chrUextra 18835323 18836012 -10168644 + Stalker2_I LTR Gypsy 634 1324 -6078 1 728 189 0 0 0 chrUextra 18836113 18836134 -10168522 + (A)n Simple_repeat Simple_repeat 1 21 0 1 728 5130 47 1 1 chrUextra 18836134 18836801 -10167855 - R1_DM LINE R1 -3963 1393 727 1 728 5906 4 0 0 chrUextra 18836901 18837590 -10167066 - FW_DM LINE Jockey -1640 3052 2364 1 728 5624 12 1 1 chrUextra 18837690 18838379 -10166277 + DM176_I LTR Gypsy 1588 2276 -4144 1 728 195 69 0 0 chrUextra 18838519 18838548 -10166108 + (T)n Simple_repeat Simple_repeat 1 29 0 1 728 2585 202 5 11 chrUextra 18839268 18839929 -10164727 + SAR_DM Satellite Satellite 420 1076 -396 1 728 3155 172 9 7 chrUextra 18840058 18840745 -10163911 + SAR_DM Satellite Satellite 321 1008 -464 1 728 2829 187 7 7 chrUextra 18840856 18841535 -10163121 + SAR_DM Satellite Satellite 192 870 -602 1 728 28 71 0 0 chrUextra 18841706 18841762 -10162894 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 3217 36 19 0 chrUextra 18841903 18842324 -10162332 - PROTOP_A DNA P -594 511 83 1 728 473 30 15 0 chrUextra 18842424 18842490 -10162166 - G5_DM LINE Jockey -188 4668 4602 1 728 2694 59 59 0 chrUextra 18842487 18842861 -10161795 - G5_DM LINE Jockey -489 4367 3972 1 728 21 0 0 0 chrUextra 18842892 18842913 -10161743 + AT_rich Low_complexity Low_complexity 1 21 0 1 728 5674 16 13 0 chrUextra 18843213 18843902 -10160754 + DM1731_I LTR Copia 284 981 -2995 1 728 5887 1 1 4 chrUextra 18844002 18844691 -10159965 - SSU-rRNA_Dme rRNA rRNA -555 1440 754 1 728 5712 3 0 3 chrUextra 18844791 18845480 -10159176 + ROO_I LTR Pao 2748 3434 -4822 1 728 3865 110 71 0 chrUextra 18845580 18846269 -10158387 - TART_B1 LINE telomeric -7967 2687 1950 1 728 4693 2 0 0 chrUextra 18846369 18846917 -10157739 + FW_DM LINE Jockey 4145 4692 0 1 728 1652 67 50 4 chrUextra 18847158 18847397 -10157259 + R1_DM LINE R1 1368 1617 -3739 1 728 3668 18 0 0 chrUextra 18847409 18847847 -10156809 + R1_DM LINE R1 2001 2438 -2918 1 728 3051 176 15 6 chrUextra 18847947 18848632 -10156024 + SAR_DM Satellite Satellite 378 1068 -404 1 728 288 85 23 58 chrUextra 18849028 18849115 -10155541 + A-rich Low_complexity Low_complexity 1 84 0 1 728 5837 1 0 0 chrUextra 18849525 18850212 -10154444 - DM297_I LTR Gypsy -4933 1234 548 1 728 2055 41 0 11 chrUextra 18850314 18850585 -10154071 - G2_DM LINE Jockey -1424 1678 1411 1 728 22 56 0 0 chrUextra 18850734 18850770 -10153886 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 603 80 0 0 chrUextra 18850914 18851002 -10153654 + G2_DM LINE Jockey 2469 2556 -546 1 728 866 183 102 15 chrUextra 18851112 18851317 -10153339 + DMLTR5 LTR Gypsy 44 266 0 1 728 351 49 65 16 chrUextra 18851316 18851378 -10153278 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 728 262 106 0 21 chrUextra 18851400 18851448 -10153208 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 728 1406 11 16 16 chrUextra 18851892 18852080 -10152576 - DM297_LTR LTR Gypsy -226 188 1 1 728 1408 20 20 20 chrUextra 18852095 18852298 -10152358 + NTS_DM Other Other 38 240 0 1 728 1734 21 17 17 chrUextra 18852298 18852538 -10152118 + NTS_DM Other Other 1 240 0 1 728 358 23 0 0 chrUextra 18852538 18852581 -10152075 + NTS_DM Other Other 1 43 -197 1 728 5682 17 0 0 chrUextra 18852681 18853370 -10151286 + FW_DM LINE Jockey 868 1556 -3136 1 728 1391 18 0 0 chrUextra 18853470 18853635 -10151021 + PROTOP_A DNA P 941 1105 0 1 728 248 29 0 0 chrUextra 18853635 18853667 -10150989 - PROTOP_A DNA P -1073 32 1 1 728 2943 181 13 9 chrUextra 18854261 18854948 -10149708 + SAR_DM Satellite Satellite 229 918 -554 1 728 3219 15 2 5 chrUextra 18855048 18855453 -10149203 - R1_DM LINE R1 -4176 1180 777 1 728 2161 49 0 7 chrUextra 18855452 18855737 -10148919 - R1_DM LINE R1 -4838 518 236 1 728 2284 103 16 29 chrUextra 18856626 18857314 -10147342 + DMSAT6 Satellite Satellite 1 679 -97 1 728 4166 21 6 0 chrUextra 18857415 18857938 -10146718 + ACCORD2_I LTR Gypsy 6677 7202 -10 1 728 1306 25 0 24 chrUextra 18857938 18858104 -10146552 + ACCORD2_LTR LTR Gypsy 1 162 -53 1 728 5888 7 1 0 chrUextra 18858204 18858893 -10145763 - R1_DM LINE R1 -2545 2811 2122 1 728 5964 1 0 1 chrUextra 18858993 18859682 -10144974 - ROO_I LTR Pao -531 7725 7038 1 728 5875 0 1 1 chrUextra 18859782 18860471 -10144185 + ROO_I LTR Pao 5308 5996 -2260 1 728 1559 49 0 0 chrUextra 18860575 18860778 -10143878 - MDG1_I LTR Gypsy -2554 4042 3840 1 728 2011 55 0 4 chrUextra 18860769 18861043 -10143613 - MDG1_I LTR Gypsy -2881 3715 3443 1 728 1623 59 0 0 chrUextra 18861039 18861260 -10143396 - MDG1_I LTR Gypsy -3922 2674 2454 1 728 2828 180 11 8 chrUextra 18861361 18862017 -10142639 - SAR_DM Satellite Satellite -620 852 195 1 728 717 112 8 0 chrUextra 18861924 18862049 -10142607 + ARS406_DM Unknown Unknown 1 126 -227 1 728 4153 22 60 7 chrUextra 18862149 18862838 -10141818 - R1_DM LINE R1 -1713 3643 2919 1 728 1592 37 0 0 chrUextra 18862938 18863153 -10141503 - BATUMI_I LTR Pao -446 7517 7303 1 728 3351 34 9 11 chrUextra 18863176 18863627 -10141029 + BATUMI_I LTR Pao 6427 6876 -1087 1 728 2787 172 54 20 chrUextra 18863728 18864416 -10140240 + SAR_DM Satellite Satellite 1 711 -208 1 728 5590 19 28 1 chrUextra 18864516 18865205 -10139451 + FW_DM LINE Jockey 3843 4549 -143 1 728 5871 0 0 1 chrUextra 18865305 18865994 -10138662 + ROO_I LTR Pao 6681 7368 -888 1 728 1392 288 31 28 chrUextra 18866179 18866783 -10137873 + Gypsy_DS LTR Gypsy 641 1827 -5695 1 728 1773 0 18 13 chrUextra 18866883 18867112 -10137544 - NTS_DM Other Other -10 230 1 1 728 1850 4 17 13 chrUextra 18867112 18867351 -10137305 - NTS_DM Other Other 0 240 1 1 728 1022 37 24 30 chrUextra 18867351 18867520 -10137136 - NTS_DM Other Other 0 240 73 1 728 264 64 0 21 chrUextra 18867524 18867572 -10137084 - NTS_DM Other Other -88 152 106 1 728 5706 1 0 13 chrUextra 18867672 18868360 -10136296 - DOC LINE Jockey -3554 1171 493 1 728 255 262 68 95 chrUextra 18868939 18869129 -10135527 - Invader1_LTR LTR Gypsy -55 368 184 1 728 353 41 20 0 chrUextra 18869250 18869299 -10135357 + ARS406_DM Unknown Unknown 140 189 -164 1 728 2951 177 8 8 chrUextra 18869256 18869923 -10134733 - SAR_DM Satellite Satellite -614 858 192 1 728 671 116 0 0 chrUextra 18869827 18869939 -10134717 + ARS406_DM Unknown Unknown 1 112 -241 1 728 5704 17 0 0 chrUextra 18870039 18870728 -10133928 - DMRT1B LINE R1 -598 4585 3897 1 728 5853 1 1 0 chrUextra 18870828 18871517 -10133139 + STALKER4_I LTR Gypsy 3309 3998 -2532 1 728 3360 52 65 0 chrUextra 18871617 18872306 -10132350 - PROTOP DNA P -285 820 219 1 728 2954 162 22 16 chrUextra 18872406 18873095 -10131561 + SAR_DM Satellite Satellite 293 985 -487 1 728 2335 203 20 7 chrUextra 18873201 18873882 -10130774 + SAR_DM Satellite Satellite 1 690 -416 1 728 1257 26 20 30 chrUextra 18873985 18874182 -10130474 - NTS_DM Other Other -8 232 38 1 728 817 0 0 0 chrUextra 18874182 18874278 -10130378 - NTS_DM Other Other -107 133 38 1 11 832 9 9 27 chrUextra 18874278 18874389 -10130267 - NTS_DM Other Other -107 133 25 1 729 21 57 0 0 chrUextra 18874415 18874450 -10130206 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 1229 24 0 6 chrUextra 18874450 18874615 -10130041 - NTS_DM Other Other -39 201 38 1 729 430 17 0 0 chrUextra 18874615 18874673 -10129983 - NTS_DM Other Other -107 133 76 1 729 5904 9 0 0 chrUextra 18874773 18875462 -10129194 + Gypsy4_I LTR Gypsy 3604 4292 -1996 1 729 34 24 0 0 chrUextra 18875643 18875684 -10128972 + AT_rich Low_complexity Low_complexity 1 41 0 1 729 5894 1 0 1 chrUextra 18876351 18877040 -10127616 + FW_DM LINE Jockey 1497 2184 -2508 1 729 5591 10 1 0 chrUextra 18877140 18877829 -10126827 + IDEFIX_I LTR Gypsy 4294 4983 -645 1 729 2553 3 0 3 chrUextra 18877929 18878225 -10126431 - R2_DM LINE R2 -3310 297 3 1 729 3425 2 0 0 chrUextra 18878223 18878618 -10126038 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2187 1 729 1612 19 0 5 chrUextra 18878718 18878924 -10125732 - NTS_DM Other Other -35 205 1 1 729 1734 21 17 17 chrUextra 18878924 18879164 -10125492 - NTS_DM Other Other 0 240 1 1 729 1391 25 20 20 chrUextra 18879164 18879367 -10125289 - NTS_DM Other Other 0 240 38 1 729 302 0 0 0 chrUextra 18879367 18879407 -10125249 - NTS_DM Other Other -107 133 94 1 729 3102 184 40 39 chrUextra 18879507 18880946 -10123710 - SAR_DM Satellite Satellite -570 1440 1 1 729 684 277 38 26 chrUextra 18880644 18880985 -10123671 + XDMR_DM Unknown Unknown 6 350 -10 1 729 4189 14 37 0 chrUextra 18881104 18881617 -10123039 - PROTOP_A DNA P -573 532 1 1 729 21 57 0 0 chrUextra 18881879 18881914 -10122742 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 255 125 0 0 chrUextra 18881927 18881967 -10122689 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 246 150 0 0 chrUextra 18882010 18882050 -10122606 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 246 150 0 0 chrUextra 18882102 18882142 -10122514 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 246 150 0 0 chrUextra 18882194 18882234 -10122422 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 22 56 0 0 chrUextra 18882239 18882275 -10122381 + AT_rich Low_complexity Low_complexity 1 36 0 1 729 1892 0 0 0 chrUextra 18882347 18882563 -10122093 - LSU-rRNA_Dme rRNA rRNA 0 3900 3685 1 729 5760 13 0 0 chrUextra 18882667 18883352 -10121304 + STALKER4_I LTR Gypsy 4387 5071 -1459 1 729 4774 7 0 0 chrUextra 18883452 18884006 -10120650 + LSU-rRNA_Dme rRNA rRNA 2031 2584 -1316 1 729 1092 8 8 0 chrUextra 18884010 18884141 -10120515 + R2_DM LINE R2 3 134 -3473 1 729 272 0 0 0 chrUextra 18884241 18884273 -10120383 + R1_DM LINE R1 4565 4596 -760 1 729 5651 3 0 0 chrUextra 18884280 18884930 -10119726 - DMRT1B LINE R1 0 5183 4534 1 729 28 48 0 0 chrUextra 18885060 18885102 -10119554 + AT_rich Low_complexity Low_complexity 1 42 0 1 729 2209 173 49 32 chrUextra 18885109 18885665 -10118991 + Stalker2_I LTR Gypsy 291 855 -6547 1 729 1391 108 0 9 chrUextra 18885833 18886047 -10118609 + BS2 LINE Jockey 250 461 -4260 1 729 3167 43 2 19 chrUextra 18886079 18886508 -10118148 - G5A_DM LINE Jockey 0 2841 2420 1 729 5950 3 0 0 chrUextra 18886609 18887297 -10117359 - R1_DM LINE R1 -2936 2420 1733 1 729 5610 0 3 1 chrUextra 18887439 18888086 -10116570 - LSU-rRNA_Dme rRNA rRNA 0 3900 3253 1 729 5340 2 0 0 chrUextra 18888191 18888810 -10115846 + QUASIMODO_LTR LTR Gypsy 40 658 0 1 729 5984 1 1 1 chrUextra 18888975 18889664 -10114992 - LSU-rRNA_Dme rRNA rRNA -381 3519 2831 1 729 5861 0 3 1 chrUextra 18889764 18890440 -10114216 + LSU-rRNA_Dme rRNA rRNA 3224 3900 0 1 729 3884 68 73 22 chrUextra 18890553 18891242 -10113414 - STALKER4_I LTR Gypsy -5006 1524 801 1 729 1468 6 0 6 chrUextra 18891342 18891517 -10113139 + STALKER4_LTR LTR Gypsy 229 402 0 1 729 2042 117 54 41 chrUextra 18891559 18892022 -10112634 + DMSAT6 Satellite Satellite 1 469 -1 1 729 3130 168 10 9 chrUextra 18892131 18892820 -10111836 + SAR_DM Satellite Satellite 379 1068 -404 1 729 5982 3 0 0 chrUextra 18892920 18893609 -10111047 + DMRT1B LINE R1 3112 3800 -1383 1 729 705 116 0 0 chrUextra 18893709 18893830 -10110826 - ARS406_DM Unknown Unknown -232 121 1 1 729 2833 180 11 8 chrUextra 18893737 18894393 -10110263 + SAR_DM Satellite Satellite 195 852 -620 1 729 290 51 0 0 chrUextra 18894358 18894397 -10110259 - ARS406_DM Unknown Unknown -166 187 149 1 729 5843 7 0 1 chrUextra 18894498 18895187 -10109469 + R1_DM LINE R1 4656 5343 -13 1 729 2821 175 9 25 chrUextra 18895287 18895973 -10108683 + SAR_DM Satellite Satellite 439 1113 -359 1 729 2718 110 102 45 chrUextra 18896095 18896763 -10107893 - BATUMI_I LTR Pao -7194 769 64 1 729 5869 1 0 0 chrUextra 18896863 18897551 -10107105 + ROO_I LTR Pao 3639 4326 -3930 1 729 34 24 0 0 chrUextra 18897681 18897722 -10106934 + AT_rich Low_complexity Low_complexity 1 41 0 1 729 21 95 0 0 chrUextra 18897936 18897999 -10106657 + AT_rich Low_complexity Low_complexity 1 63 0 1 729 1930 0 0 0 chrUextra 18898011 18898233 -10106423 + LSU-rRNA_Dme rRNA rRNA 1 222 -3678 1 729 755 0 0 0 chrUextra 18898251 18898339 -10106317 + R2_DM LINE R2 1481 1568 -2039 1 729 4586 4 22 0 chrUextra 18898439 18898991 -10105665 - HMSBEAGLE_I LTR Gypsy -5965 564 1 1 729 1168 15 0 0 chrUextra 18898990 18899127 -10105529 - DMLTR5 LTR Gypsy 0 266 130 1 729 5821 1 3 0 chrUextra 18899227 18899915 -10104741 - STALKER4_I LTR Gypsy -701 5829 5140 1 729 2927 196 26 27 chrUextra 18900015 18900703 -10103953 - SAR_DM Satellite Satellite -1072 687 1 1 729 5802 4 0 0 chrUextra 18900803 18901491 -10103165 + DM297_I LTR Gypsy 4682 5369 -798 1 729 1575 247 32 62 chrUextra 18901596 18902257 -10102399 + Gypsy12_LTR LTR Gypsy 615 1255 -1081 1 729 5863 9 3 0 chrUextra 18902379 18903067 -10101589 + Gypsy4_I LTR Gypsy 2644 3333 -2955 1 729 5871 3 1 1 chrUextra 18903167 18903855 -10100801 + R1_DM LINE R1 4306 4993 -363 1 729 5827 0 1 0 chrUextra 18904743 18905431 -10099225 + LSU-rRNA_Dme rRNA rRNA 350 1038 -2862 1 729 1044 0 0 0 chrUextra 18905531 18905661 -10098995 + ROO_I LTR Pao 5807 5936 -2320 1 729 4705 0 23 0 chrUextra 18905661 18906219 -10098437 + ROO_I LTR Pao 6738 7308 -948 1 729 2544 191 9 23 chrUextra 18906319 18906982 -10097674 + SAR_DM Satellite Satellite 465 1118 -354 1 729 410 202 0 18 chrUextra 18906896 18907007 -10097649 - XDMR_DM Unknown Unknown 0 360 252 1 729 5525 7 1 1 chrUextra 18907107 18907779 -10096877 + DM297_I LTR Gypsy 3211 3882 -2285 1 729 2324 201 70 17 chrUextra 18907895 18908583 -10096073 - SAR_DM Satellite Satellite -594 724 1 1 729 533 197 0 0 chrUextra 18908683 18908800 -10095856 - ARS406_DM Unknown Unknown -236 117 1 1 729 2507 155 26 12 chrUextra 18908699 18909364 -10095292 + SAR_DM Satellite Satellite 1 674 -426 1 729 5922 6 0 0 chrUextra 18909471 18910159 -10094497 + PROTOP DNA P 2308 2995 -1485 1 729 2935 184 9 10 chrUextra 18910259 18910947 -10093709 - SAR_DM Satellite Satellite -489 983 297 1 729 2380 204 25 16 chrUextra 18911048 18911735 -10092921 - SAR_DM Satellite Satellite -313 1159 467 1 729 2150 23 0 4 chrUextra 18911835 18912096 -10092560 + PROTOP DNA P 4221 4480 0 1 729 351 308 15 25 chrUextra 18912191 18912394 -10092262 + Gypsy7_I LTR Gypsy 1166 1366 -3618 1 729 625 14 0 0 chrUextra 18912623 18912697 -10091959 + DM176_LTR LTR Gypsy 210 283 -224 1 729 2016 20 16 0 chrUextra 18912698 18912951 -10091705 + DM176_LTR LTR Gypsy 251 507 0 1 729 2863 17 3 11 chrUextra 18912951 18913311 -10091345 + DM176_I LTR Gypsy 1 357 -6063 1 729 4413 84 1 38 chrUextra 18913415 18914099 -10090557 + Gypsy12_I LTR Gypsy 646 1304 -4242 1 729 3210 166 11 12 chrUextra 18914201 18914887 -10089769 - SAR_DM Satellite Satellite -1109 685 1 1 729 1736 38 8 29 chrUextra 18915916 18916162 -10088494 - BATUMI_LTR LTR Pao 0 272 32 1 729 237 159 73 73 chrUextra 18916271 18916339 -10088317 + Gypsy4_I LTR Gypsy 4324 4391 -1897 1 729 4610 52 24 0 chrUextra 18916591 18917185 -10087471 + IDEFIX_I LTR Gypsy 21 614 -5014 1 729 183 42 0 0 chrUextra 18917185 18917209 -10087447 + (TTA)n Simple_repeat Simple_repeat 3 26 0 1 729 4610 52 24 0 chrUextra 18917209 18917251 -10087405 + IDEFIX_I LTR Gypsy 615 670 -4958 1 729 868 169 63 18 chrUextra 18917351 18917574 -10087082 - Gypsy12_LTR LTR Gypsy -321 2015 1783 1 729 1650 181 96 33 chrUextra 18917562 18918020 -10086636 - Gypsy12_LTR LTR Gypsy -778 1558 1072 1 729 3555 65 51 112 chrUextra 18918139 18918827 -10085829 - MDG1_I LTR Gypsy -4947 1649 1004 1 729 2963 96 221 33 chrUextra 18918927 18919615 -10085041 - STALKER4_I LTR Gypsy -5104 1426 610 1 729 5938 7 0 0 chrUextra 18919715 18920403 -10084253 + R2_DM LINE R2 2612 3299 -308 1 729 5893 6 0 0 chrUextra 18920503 18921191 -10083465 - R1_DM LINE R1 -46 5310 4623 1 729 21 89 0 0 chrUextra 18921405 18921461 -10083195 + AT_rich Low_complexity Low_complexity 1 56 0 1 729 29 47 0 0 chrUextra 18921499 18921542 -10083114 + AT_rich Low_complexity Low_complexity 1 43 0 1 729 22 80 0 0 chrUextra 18921588 18921638 -10083018 + AT_rich Low_complexity Low_complexity 1 50 0 1 729 5425 29 7 3 chrUextra 18922082 18922767 -10081889 + MDG1_I LTR Gypsy 1558 2245 -4351 1 729 3103 171 9 10 chrUextra 18922869 18923553 -10081103 - SAR_DM Satellite Satellite -464 1008 326 1 729 26 30 0 0 chrUextra 18923701 18923734 -10080922 + AT_rich Low_complexity Low_complexity 1 33 0 1 729 1888 39 0 0 chrUextra 18924111 18924343 -10080313 - PROTOP DNA P 0 4480 4249 1 729 5862 1 1 4 chrUextra 18924443 18925131 -10079525 - LSU-rRNA_Dme rRNA rRNA -2402 1498 813 1 729 3024 180 9 13 chrUextra 18925231 18925919 -10078737 + SAR_DM Satellite Satellite 333 1017 -455 1 729 5680 20 0 3 chrUextra 18926019 18926707 -10077949 - G_DM LINE Jockey -1254 3092 2407 1 729 2892 179 12 16 chrUextra 18926808 18927495 -10077161 - SAR_DM Satellite Satellite -577 895 212 1 729 5913 3 3 0 chrUextra 18927595 18928283 -10076373 + DMRT1B LINE R1 3021 3710 -1473 1 729 2314 92 4 41 chrUextra 18928384 18929071 -10075585 + DMSAT6 Satellite Satellite 1 661 -85 1 729 5958 3 1 0 chrUextra 18929171 18929859 -10074797 + R2_DM LINE R2 694 1382 -2225 1 729 5616 18 3 4 chrUextra 18929959 18930647 -10074009 + Gypsy4_I LTR Gypsy 4288 4974 -1314 1 729 244 128 0 21 chrUextra 18931332 18931380 -10073276 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 729 2460 87 41 21 chrUextra 18931543 18932223 -10072433 - DMSAT6 Satellite Satellite -64 694 1 1 729 2963 164 23 13 chrUextra 18933113 18933799 -10070857 + SAR_DM Satellite Satellite 376 1068 -404 1 729 3065 169 19 10 chrUextra 18933899 18934587 -10070069 + SAR_DM Satellite Satellite 293 986 -486 1 729 286 282 107 89 chrUextra 18936326 18936606 -10068050 + Invader1_LTR LTR Gypsy 84 368 -55 1 729 2900 171 39 13 chrUextra 18937051 18937739 -10066917 - SAR_DM Satellite Satellite -446 1026 321 1 729 5885 3 1 0 chrUextra 18937839 18938527 -10066129 + DMRT1B LINE R1 3767 4455 -728 1 729 5684 23 1 0 chrUextra 18939415 18940103 -10064553 + R1_DM LINE R1 4140 4828 -528 1 729 5779 3 0 1 chrUextra 18940203 18940891 -10063765 + ROO_I LTR Pao 1570 2256 -6000 1 729 5829 3 1 4 chrUextra 18940991 18941679 -10062977 + LSU-rRNA_Dme rRNA rRNA 785 1470 -2430 1 729 801 102 0 0 chrUextra 18942567 18942694 -10061962 - ARS406_DM Unknown Unknown -226 127 1 1 729 2847 178 9 9 chrUextra 18942601 18943254 -10061402 + SAR_DM Satellite Satellite 195 847 -625 1 729 3004 190 12 15 chrUextra 18943358 18944026 -10060630 - SAR_DM Satellite Satellite -615 857 192 1 729 799 80 9 0 chrUextra 18943931 18944043 -10060613 + ARS406_DM Unknown Unknown 1 113 -240 1 729 6018 29 3 0 chrUextra 18944143 18944831 -10059825 + MAX_I LTR Pao 3834 4523 -3391 1 729 6250 1 0 0 chrUextra 18944931 18945619 -10059037 - R1_DM LINE R1 -2105 3251 2564 1 729 5950 29 1 0 chrUextra 18945719 18946407 -10058249 + R1_DM LINE R1 4442 5130 -226 1 729 1036 0 9 0 chrUextra 18946507 18946623 -10058033 + 5S_DM RNA RNA 19 135 0 1 729 1246 0 0 0 chrUextra 18946854 18946989 -10057667 + 5S_DM RNA RNA 1 135 0 1 729 3407 170 13 15 chrUextra 18947295 18947982 -10056674 + SAR_DM Satellite Satellite 381 1066 -406 1 729 3546 44 25 0 chrUextra 18948872 18949306 -10055350 - ROO_I LTR Pao -338 7918 7474 1 729 2166 15 100 0 chrUextra 18949299 18949559 -10055097 - ROO_I LTR Pao -1000 7256 6971 1 729 3337 173 12 12 chrUextra 18949663 18950346 -10054310 + SAR_DM Satellite Satellite 364 1046 -426 1 729 921 10 0 0 chrUextra 18950447 18950548 -10054108 - DM1731_LTR LTR Copia -235 101 1 1 729 5225 3 5 10 chrUextra 18950548 18951135 -10053521 - DM1731_I LTR Copia 0 3976 3393 1 729 660 0 0 25 chrUextra 18951235 18951315 -10053341 + SSU-rRNA_Dme rRNA rRNA 1918 1995 0 1 729 21 89 0 0 chrUextra 18951334 18951390 -10053266 + AT_rich Low_complexity Low_complexity 1 56 0 1 729 5991 22 1 0 chrUextra 18952811 18953499 -10051157 + R1_DM LINE R1 2958 3646 -1710 1 729 759 11 0 0 chrUextra 18953599 18953687 -10050969 + (TCTTG)n Simple_repeat Simple_repeat 3 90 0 1 729 1847 38 8 25 chrUextra 18954387 18954632 -10050024 + BATUMI_I LTR Pao 7044 7284 -679 1 729 2617 88 86 27 chrUextra 18954632 18955075 -10049581 + BATUMI_I LTR Pao 1 469 -7494 1 729 34 24 0 0 chrUextra 18955286 18955327 -10049329 + AT_rich Low_complexity Low_complexity 1 41 0 1 729 5544 37 4 10 chrUextra 18955964 18956651 -10048005 - DMRT1B LINE R1 -37 5146 4464 1 729 5289 44 44 16 chrUextra 18956751 18957439 -10047217 + ROO_I LTR Pao 1232 1938 -6318 1 729 405 0 0 0 chrUextra 18957539 18957584 -10047072 + (GAGAA)n Simple_repeat Simple_repeat 2 46 0 1 729 5981 20 4 0 chrUextra 18958327 18959015 -10045641 + ROO_I LTR Pao 3541 4231 -4025 1 729 3329 181 9 7 chrUextra 18959116 18959800 -10044856 - SAR_DM Satellite Satellite -593 879 195 1 729 6196 1 0 0 chrUextra 18960691 18961379 -10043277 + DM297_I LTR Gypsy 581 1268 -4899 1 729 5704 20 1 4 chrUextra 18961479 18962167 -10042489 + PROTOP_A DNA P 167 852 -253 1 729 6109 10 3 0 chrUextra 18962267 18962955 -10041701 + STALKER4_I LTR Gypsy 4516 5205 -1325 1 729 6324 0 0 0 chrUextra 18963055 18963743 -10040913 - DMRT1A LINE R1 -2997 2186 1499 1 729 2927 184 17 26 chrUextra 18963843 18964531 -10040125 + SAR_DM Satellite Satellite 465 1146 -326 1 729 1005 50 0 0 chrUextra 18964631 18964750 -10039906 + PROTOP_A DNA P 68 186 -919 1 729 3968 9 63 0 chrUextra 18964764 18965319 -10039337 + PROTOP_A DNA P 233 822 -283 1 729 3235 27 3 0 chrUextra 18965421 18965789 -10038867 - DIVER2_LTR LTR Pao -16 369 1 1 729 2831 16 0 0 chrUextra 18965789 18966107 -10038549 - DIVER2_I LTR Pao 0 4147 3830 1 729 5493 22 86 1 chrUextra 18966208 18966895 -10037761 + STALKER4_I LTR Gypsy 2441 3185 -3345 1 729 4561 66 0 26 chrUextra 18966995 18967601 -10037055 + CIRCE LINE Composite 2246 2835 -3521 1 729 581 51 0 25 chrUextra 18967603 18967683 -10036973 + CIRCE LINE Composite 2961 3038 -3318 1 729 3467 172 9 10 chrUextra 18967783 18968471 -10036185 - SAR_DM Satellite Satellite -404 1068 382 1 729 6087 29 0 0 chrUextra 18968571 18969259 -10035397 + DIVER_I LTR Pao 4706 5393 -250 1 729 6418 1 0 0 chrUextra 18969359 18970047 -10034609 + LSU-rRNA_Dme rRNA rRNA 2214 2901 -999 1 729 2419 234 12 53 chrUextra 18970156 18970833 -10033823 + Gypsy12_LTR LTR Gypsy 105 753 -1583 1 729 5835 33 0 0 chrUextra 18970935 18971623 -10033033 - R1_DM LINE R1 -1816 3540 2853 1 729 679 67 0 0 chrUextra 18971723 18971813 -10032843 + R1_DM LINE R1 523 612 -4744 1 729 3459 46 60 2 chrUextra 18971798 18972411 -10032245 + R1_DM LINE R1 1384 2032 -3324 1 729 1917 145 22 35 chrUextra 18972511 18972910 -10031746 - STALKER4_I LTR Gypsy -5792 738 228 1 729 22 0 0 0 chrUextra 18972928 18972950 -10031706 + AT_rich Low_complexity Low_complexity 1 22 0 1 729 819 107 21 12 chrUextra 18973068 18973198 -10031458 - STALKER4_LTR LTR Gypsy -23 379 227 1 729 6287 0 0 1 chrUextra 18973299 18973987 -10030669 + HETA LINE telomeric 1817 2503 -3578 1 729 6264 10 1 0 chrUextra 18974087 18974775 -10029881 - Copia2_I LTR Copia -1990 2172 1484 1 729 819 31 0 30 chrUextra 18974875 18974974 -10029682 - R1_DM LINE R1 -448 4908 4813 1 729 5628 2 0 0 chrUextra 18974960 18975563 -10029093 - LSU-rRNA_Dme rRNA rRNA -1263 2637 2035 1 729 312 159 12 24 chrUextra 18975664 18975748 -10028908 - R1_DM LINE R1 -4700 656 574 1 729 1055 108 29 29 chrUextra 18975749 18975921 -10028735 - R1_DM LINE R1 -5184 172 1 1 729 2080 65 3 35 chrUextra 18975939 18976228 -10028428 + Gypsy6A_LTR LTR Gypsy 71 350 -70 1 729 793 82 41 0 chrUextra 18976227 18976349 -10028307 - Stalker2_I LTR Gypsy -4238 3164 3038 1 729 3106 183 12 13 chrUextra 18976451 18977139 -10027517 - SAR_DM Satellite Satellite -546 926 240 1 729 5784 9 36 0 chrUextra 18977239 18977927 -10026729 + Invader2_I LTR Gypsy 33 745 -3847 1 729 880 19 9 27 chrUextra 18978029 18978140 -10026516 - NTS_DM Other Other -107 133 25 1 729 21 57 0 0 chrUextra 18978166 18978201 -10026455 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 1350 18 0 6 chrUextra 18978201 18978366 -10026290 - NTS_DM Other Other -39 201 38 1 729 936 9 0 27 chrUextra 18978366 18978478 -10026178 - NTS_DM Other Other -107 133 25 1 729 1350 18 0 6 chrUextra 18978530 18978695 -10025961 - NTS_DM Other Other -39 201 38 1 729 6269 6 0 0 chrUextra 18978815 18979503 -10025153 - IVK_DM LINE I -2287 3115 2428 1 729 203 152 0 0 chrUextra 18979895 18979928 -10024728 + CT-rich Low_complexity Low_complexity 1 33 0 1 729 6150 6 1 4 chrUextra 18980391 18981079 -10023577 - IDEFIX_I LTR Gypsy -2687 2941 2256 1 729 1741 35 0 0 chrUextra 18981179 18981380 -10023276 - PROTOP_A DNA P -904 201 1 1 729 1887 23 0 0 chrUextra 18981380 18981597 -10023059 - Invader6_LTR LTR Gypsy -165 228 12 1 729 690 25 0 0 chrUextra 18981589 18981669 -10022987 - Invader6_I LTR Gypsy -10 4089 4010 1 729 1431 30 0 0 chrUextra 18981699 18981867 -10022789 - Invader6_I LTR Gypsy -88 4011 3844 1 729 2415 4 0 0 chrUextra 18981967 18982228 -10022428 - STALKER4_LTR LTR Gypsy -141 261 1 1 729 1298 130 0 0 chrUextra 18982228 18982427 -10022229 + ROVER-I_DM LTR Gypsy 5110 5308 -1276 1 729 754 218 0 11 chrUextra 18982462 18982638 -10022018 + ROVER-I_DM LTR Gypsy 5990 6163 -421 1 729 6201 7 0 1 chrUextra 18982755 18983443 -10021213 - R1_DM LINE R1 -3003 2353 1667 1 729 6067 9 0 0 chrUextra 18984331 18985019 -10019637 - DMRT1B LINE R1 -3980 1203 516 1 729 6243 4 0 1 chrUextra 18985119 18985807 -10018849 + DMRT1B LINE R1 108 794 -4389 1 729 536 300 25 51 chrUextra 18985922 18986196 -10018460 - HMSBEAGLE_I LTR Gypsy -3619 2910 2644 1 729 457 209 9 9 chrUextra 18986465 18986576 -10018080 - HMSBEAGLE_I LTR Gypsy -4097 2432 2322 1 729 6423 0 1 0 chrUextra 18986695 18987383 -10017273 + SSU-rRNA_Dme rRNA rRNA 386 1074 -921 1 729 1068 162 97 0 chrUextra 18987483 18987699 -10016957 + MAX_LTR LTR Pao 85 321 0 1 729 2868 47 38 88 chrUextra 18987699 18988144 -10016512 + MAX_I LTR Pao 1 423 -7491 1 729 4123 87 141 41 chrUextra 18988271 18988959 -10015697 + Gypsy12_I LTR Gypsy 504 1260 -4286 1 729 5848 1 1 10 chrUextra 18989062 18989747 -10014909 + DM412 LTR Gypsy 1498 2176 -4721 1 729 3259 185 7 9 chrUextra 18989858 18990535 -10014121 - SAR_DM Satellite Satellite -535 937 262 1 729 1236 0 0 7 chrUextra 18990635 18990771 -10013885 - LSU-rRNA_Dme rRNA rRNA -1978 1922 1788 1 729 4523 2 6 6 chrUextra 18990812 18991323 -10013333 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1281 1 729 1592 169 9 0 chrUextra 18991423 18991742 -10012914 - ROVER-I_DM LTR Gypsy -273 6311 5990 1 729 1956 150 6 3 chrUextra 18991777 18992111 -10012545 - ROVER-I_DM LTR Gypsy -1276 5308 4974 1 729 6136 7 0 0 chrUextra 18992211 18992899 -10011757 + G2_DM LINE Jockey 1864 2551 -551 1 729 5464 9 0 39 chrUextra 18993016 18993687 -10010969 + STALKER4_I LTR Gypsy 2725 3369 -3161 1 729 3523 155 13 15 chrUextra 18993787 18994474 -10010182 - SAR_DM Satellite Satellite -435 1037 352 1 729 2738 0 3 7 chrUextra 18994575 18994880 -10009776 - SSU-rRNA_Dme rRNA rRNA -735 1260 957 1 729 5152 7 3 0 chrUextra 18995363 18995934 -10008722 - R1_DM LINE R1 -4783 573 1 1 729 1038 8 8 0 chrUextra 18995934 18996051 -10008605 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2515 1 729 2521 109 16 23 chrUextra 18996155 18996839 -10007817 - DMSAT6 Satellite Satellite -98 679 1 1 729 2339 0 0 0 chrUextra 18996939 18997190 -10007466 - FW_DM LINE Jockey -4441 251 1 1 729 1879 185 73 14 chrUextra 18997199 18997622 -10007034 - HETA LINE telomeric -1164 4917 4470 1 729 1605 233 45 55 chrUextra 18997728 18998414 -10006242 + SAR_DM Satellite Satellite 180 858 -614 1 729 6130 16 0 0 chrUextra 18998515 18999203 -10005453 - R1_DM LINE R1 -1596 3760 3073 1 729 6336 0 1 3 chrUextra 18999304 18999991 -10004665 - SSU-rRNA_Dme rRNA rRNA -287 1708 1023 1 729 220 315 0 0 chrUextra 19000542 19000720 -10003936 + A-rich Low_complexity Low_complexity 1 178 0 1 729 347 26 0 0 chrUextra 19000879 19000918 -10003738 - NTS_DM Other Other -201 39 1 1 729 1882 21 17 17 chrUextra 19000918 19001158 -10003498 - NTS_DM Other Other 0 240 1 1 729 1879 21 17 17 chrUextra 19001158 19001398 -10003258 - NTS_DM Other Other 0 240 1 1 729 1203 18 24 24 chrUextra 19001398 19001567 -10003089 - NTS_DM Other Other 0 240 72 1 729 5444 43 3 13 chrUextra 19001667 19002355 -10002301 - BATUMI_I LTR Pao -4322 3641 2961 1 729 6191 7 0 0 chrUextra 19002455 19003143 -10001513 + STALKER4_I LTR Gypsy 1986 2673 -3857 1 729 5591 36 3 19 chrUextra 19003243 19003931 -10000725 + BATUMI_I LTR Pao 1259 1935 -6028 1 729 3387 44 102 30 chrUextra 19004031 19004500 -10000156 + Invader2_I LTR Gypsy 717 1219 -3373 1 729 1919 30 0 9 chrUextra 19004487 19004719 -9999937 + Invader2_I LTR Gypsy 1873 2102 -2490 1 91 5798 6 1 1 chrUextra 19004819 19005465 -9999191 - ACCORD_I LTR Gypsy -5642 646 1 1 730 259 0 381 0 chrUextra 19005465 19005507 -9999149 - ACCORD_LTR LTR Gypsy 0 558 501 1 730 554 88 0 0 chrUextra 19005607 19005687 -9998969 - ACCORD2_I LTR Gypsy -3469 3743 3664 1 730 4788 50 0 11 chrUextra 19005687 19006295 -9998361 - ACCORD2_I LTR Gypsy -3949 3263 2663 1 730 5333 87 0 0 chrUextra 19006395 19007083 -9997573 + Gypsy12_I LTR Gypsy 3106 3793 -1753 1 730 405 318 76 17 chrUextra 19007216 19007453 -9997203 + Gypsy7_I LTR Gypsy 1238 1488 -3496 1 730 389 269 0 0 chrUextra 19007496 19007604 -9997052 + Gypsy7_I LTR Gypsy 1560 1667 -3317 1 730 1926 34 4 29 chrUextra 19007631 19007871 -9996785 - G5A_DM LINE Jockey -3 2838 2605 1 730 713 292 51 65 chrUextra 19007991 19008419 -9996237 + Gypsy12_I LTR Gypsy 3835 4256 -1290 1 730 4960 30 3 21 chrUextra 19008052 19008659 -9995997 + CIRCE LINE Composite 1884 2479 -3877 1 730 770 208 0 11 chrUextra 19008767 19008947 -9995709 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 1 730 5314 38 74 32 chrUextra 19009547 19010235 -9994421 + Gypsy3_I LTR Gypsy 4313 5029 -1148 1 730 5960 17 1 1 chrUextra 19010335 19011023 -9993633 - R1_DM LINE R1 -1199 4157 3470 1 730 5355 3 0 0 chrUextra 19011123 19011712 -9992944 - DMRT1B LINE R1 -344 4839 4251 1 730 728 78 10 0 chrUextra 19011708 19011811 -9992845 + R1_DM LINE R1 176 279 -5077 1 730 640 67 11 22 chrUextra 19012303 19012395 -9992261 + BS3_DM LINE Jockey 1700 1790 0 1 730 24 32 0 0 chrUextra 19012494 19012525 -9992131 + AT_rich Low_complexity Low_complexity 1 31 0 1 730 1496 0 17 0 chrUextra 19012699 19012873 -9991783 + (TTATA)n Simple_repeat Simple_repeat 4 180 0 1 730 2857 39 0 0 chrUextra 19012873 19013208 -9991448 + DM1731_LTR LTR Copia 2 336 0 1 730 1615 6 6 0 chrUextra 19013208 19013387 -9991269 + DM1731_I LTR Copia 1 180 -3796 1 730 2023 299 43 40 chrUextra 19013489 19014962 -9989694 - SAR_DM Satellite Satellite -352 1476 1 1 730 32 0 0 0 chrUextra 19015167 19015199 -9989457 + AT_rich Low_complexity Low_complexity 1 32 0 1 730 28 48 0 0 chrUextra 19015529 19015571 -9989085 + AT_rich Low_complexity Low_complexity 1 42 0 1 730 3406 21 8 0 chrUextra 19015851 19016234 -9988422 + Gypsy4_I LTR Gypsy 2304 2689 -3599 1 730 2786 28 0 3 chrUextra 19016219 19016539 -9988117 + Gypsy4_I LTR Gypsy 3200 3518 -2770 1 730 1205 0 29 0 chrUextra 19016639 19016776 -9987880 + ROO_I LTR Pao 8116 8256 0 1 730 3984 5 0 0 chrUextra 19016776 19017204 -9987452 + ROO_LTR LTR Pao 1 428 0 1 730 3951 2 0 2 chrUextra 19018215 19018641 -9986015 - SSU-rRNA_Dme rRNA rRNA -1570 425 1 1 730 32 0 0 0 chrUextra 19018773 19018805 -9985851 + AT_rich Low_complexity Low_complexity 1 32 0 1 730 3557 161 9 18 chrUextra 19019004 19019689 -9984967 + SAR_DM Satellite Satellite 369 1047 -425 1 730 3234 99 67 74 chrUextra 19019805 19020478 -9984178 + MAX_I LTR Pao 1025 1692 -6222 1 730 5684 42 7 1 chrUextra 19021367 19022055 -9982601 - R1_DM LINE R1 -3570 1786 1095 1 730 6074 1 1 1 chrUextra 19022155 19022843 -9981813 - R1_DM LINE R1 -4043 1313 626 1 730 5454 11 1 4 chrUextra 19022943 19023631 -9981025 + Copia_I LTR Copia 2313 2939 -1654 1 730 770 0 0 0 chrUextra 19023731 19023815 -9980841 - LSU-rRNA_Dme rRNA rRNA -3816 84 1 1 730 21 95 0 0 chrUextra 19023827 19023890 -9980766 + AT_rich Low_complexity Low_complexity 1 63 0 1 730 34 24 0 0 chrUextra 19024104 19024145 -9980511 + AT_rich Low_complexity Low_complexity 1 41 0 1 730 271 83 0 0 chrUextra 19024519 19024555 -9980101 - HETRP_DM Satellite Satellite -308 1564 1529 1 730 690 197 13 26 chrUextra 19024676 19024832 -9979824 - HETRP_DM Satellite Satellite -190 1682 1529 1 730 729 200 6 19 chrUextra 19024956 19025114 -9979542 - HETRP_DM Satellite Satellite -188 1684 1529 1 730 2973 70 7 17 chrUextra 19025528 19025933 -9978723 - Baggins1 LINE LOA -262 5191 4791 1 730 651 0 0 0 chrUextra 19026883 19026953 -9977703 + DM176_I LTR Gypsy 6351 6420 0 1 730 3110 47 57 74 chrUextra 19026953 19027455 -9977201 + DM176_LTR LTR Gypsy 1 480 -27 1 730 1017 26 0 0 chrUextra 19027455 19027571 -9977085 + DM176_I LTR Gypsy 1 116 -6304 1 730 2994 174 16 7 chrUextra 19027672 19028284 -9976372 - SAR_DM Satellite Satellite -577 895 278 1 730 263 203 0 0 chrUextra 19028300 19028359 -9976297 - SAR_DM Satellite Satellite -396 1076 1018 1 730 5878 32 0 0 chrUextra 19028459 19029147 -9975509 - R1_DM LINE R1 -2405 2951 2264 1 730 3065 36 0 0 chrUextra 19029247 19029611 -9975045 - R1_DM LINE R1 -2462 2894 2531 1 730 2849 15 0 3 chrUextra 19029610 19029935 -9974721 - R1_DM LINE R1 -3036 2320 1997 1 730 3301 180 10 7 chrUextra 19030037 19030721 -9973935 + SAR_DM Satellite Satellite 238 923 -549 1 730 6238 3 0 1 chrUextra 19030824 19031511 -9973145 - R1_DM LINE R1 -799 4557 3872 1 730 2376 106 26 22 chrUextra 19031615 19032298 -9972358 + DMSAT6 Satellite Satellite 1 685 -3 1 730 6251 1 4 3 chrUextra 19032399 19033087 -9971569 + LSU-rRNA_Dme rRNA rRNA 949 1637 -2263 1 730 3499 163 12 9 chrUextra 19033188 19033875 -9970781 + SAR_DM Satellite Satellite 340 1028 -444 1 730 2718 190 85 23 chrUextra 19033979 19034663 -9969993 + SAR_DM Satellite Satellite 496 1221 -251 1 730 6228 1 0 1 chrUextra 19034763 19035450 -9969206 - R1_DM LINE R1 -1751 3605 2920 1 730 1532 23 0 0 chrUextra 19035550 19035727 -9968929 + MDG1_LTR LTR Gypsy 266 442 0 1 730 1830 28 0 0 chrUextra 19035741 19035954 -9968702 + MDG1_LTR LTR Gypsy 230 442 0 1 730 2612 0 0 0 chrUextra 19035954 19036237 -9968419 + MDG1_I LTR Gypsy 1 283 -6313 1 730 1598 0 0 0 chrUextra 19036337 19036507 -9968149 + LSU-rRNA_Dme rRNA rRNA 3731 3900 0 1 730 268 196 0 19 chrUextra 19036608 19036660 -9967996 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 268 196 0 19 chrUextra 19036700 19036752 -9967904 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 268 196 0 19 chrUextra 19036792 19036844 -9967812 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 253 196 0 19 chrUextra 19036875 19036927 -9967729 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 22 56 0 0 chrUextra 19036940 19036976 -9967680 + AT_rich Low_complexity Low_complexity 1 36 0 1 730 3899 12 133 0 chrUextra 19037124 19037809 -9966847 - QUASIMODO_I LTR Gypsy -4929 1131 356 1 730 1490 15 25 20 chrUextra 19037911 19038110 -9966546 + NTS_DM Other Other 41 240 0 1 730 1899 17 17 17 chrUextra 19038110 19038350 -9966306 + NTS_DM Other Other 1 240 0 1 730 1887 21 17 17 chrUextra 19038350 19038590 -9966066 + NTS_DM Other Other 1 240 0 1 730 3426 168 13 9 chrUextra 19038701 19039384 -9965272 - SAR_DM Satellite Satellite -416 1056 371 1 730 6170 7 0 0 chrUextra 19039485 19040172 -9964484 - MDG3_I LTR Gypsy -1099 3887 3201 1 730 5822 0 1 36 chrUextra 19040272 19040959 -9963697 + LSU-rRNA_Dme rRNA rRNA 79 741 -3159 1 730 2897 184 18 28 chrUextra 19041061 19041746 -9962910 + SAR_DM Satellite Satellite 1 678 -216 1 730 362 62 200 67 chrUextra 19041994 19042133 -9962523 + STALKER4_I LTR Gypsy 6491 6530 0 1 730 3235 14 14 0 chrUextra 19042133 19042500 -9962156 + Stalker3_LTR LTR Gypsy 1 372 0 1 730 285 30 0 0 chrUextra 19042500 19042533 -9962123 - R1_DM LINE R1 -523 4833 4801 1 730 2479 92 9 72 chrUextra 19042633 19043319 -9961337 + DMSAT6 Satellite Satellite 1 642 -51 1 730 972 46 0 0 chrUextra 19043977 19044107 -9960549 + (CAAGA)n Simple_repeat Simple_repeat 1 130 0 1 730 5930 25 1 3 chrUextra 19044207 19044894 -9959762 - R1_DM LINE R1 -143 5213 4528 1 730 6012 18 0 3 chrUextra 19044994 19045681 -9958975 - R1_DM LINE R1 -787 4569 3885 1 730 3226 177 6 12 chrUextra 19045790 19046452 -9958204 - SAR_DM Satellite Satellite -569 903 246 1 730 261 146 0 35 chrUextra 19046411 19046468 -9958188 + ARS406_DM Unknown Unknown 1 55 -298 1 730 3288 184 9 7 chrUextra 19047355 19048039 -9956617 + SAR_DM Satellite Satellite 256 940 -532 1 730 5230 0 2 0 chrUextra 19048269 19048829 -9955827 - SSU-rRNA_Dme rRNA rRNA 0 1995 1435 1 730 6289 1 0 0 chrUextra 19048929 19049616 -9955040 - DOC LINE Jockey -2801 1924 1238 1 730 3142 177 108 6 chrUextra 19049716 19050403 -9954253 + STALKER4_I LTR Gypsy 1212 1968 -4562 1 730 5483 3 4 70 chrUextra 19050503 19051190 -9953466 + LSU-rRNA_Dme rRNA rRNA 1300 1941 -1959 1 730 5731 30 1 13 chrUextra 19051290 19051977 -9952679 + FW_DM LINE Jockey 1286 1964 -2728 1 730 2610 119 140 3 chrUextra 19052077 19052764 -9951892 - BATUMI_I LTR Pao -3278 4636 3782 1 730 4318 59 4 2 chrUextra 19052864 19053404 -9951252 + R1_DM LINE R1 919 1459 -3897 1 730 1323 45 0 0 chrUextra 19053395 19053550 -9951106 + R1_DM LINE R1 1402 1556 -3800 1 730 3719 117 4 1 chrUextra 19053664 19054338 -9950318 + Gypsy2_I LTR Gypsy 1713 2839 -4173 1 730 5587 44 3 1 chrUextra 19055225 19055912 -9948744 + R1_DM LINE R1 742 1429 -3927 1 730 6191 7 0 3 chrUextra 19056014 19056699 -9947957 + IDEFIX_I LTR Gypsy 1377 2059 -3569 1 730 3153 166 8 8 chrUextra 19056799 19057466 -9947190 - SAR_DM Satellite Satellite -480 992 326 1 730 5067 49 3 12 chrUextra 19057586 19058273 -9946383 - BATUMI_I LTR Pao -4170 3793 3113 1 730 3960 2 2 2 chrUextra 19058376 19058834 -9945822 - SSU-rRNA_Dme rRNA rRNA -1537 458 1 1 730 32 0 0 0 chrUextra 19058966 19058998 -9945658 + AT_rich Low_complexity Low_complexity 1 32 0 1 730 5862 7 0 1 chrUextra 19059162 19059847 -9944809 + Gypsy4_I LTR Gypsy 2996 3679 -2609 1 730 3137 157 10 10 chrUextra 19059959 19060634 -9944022 - SAR_DM Satellite Satellite -396 1076 402 1 730 2797 181 7 20 chrUextra 19060739 19061421 -9943235 - SAR_DM Satellite Satellite -354 1118 446 1 730 5901 1 0 0 chrUextra 19061521 19062208 -9942448 - ROO_I LTR Pao -2631 5625 4939 1 730 4647 59 6 14 chrUextra 19062341 19062995 -9941661 + R1_DM LINE R1 1 649 -4707 1 730 5893 3 3 1 chrUextra 19063095 19063782 -9940874 - SSU-rRNA_Dme rRNA rRNA -611 1384 697 1 730 1496 315 13 25 chrUextra 19063882 19064569 -9940087 - MICROPIA_I LTR Gypsy -689 3787 3109 1 730 3899 39 6 0 chrUextra 19064670 19065160 -9939496 - DIVER_I LTR Pao -5150 493 1 1 730 628 122 0 144 chrUextra 19065181 19065354 -9939302 - DIVER_LTR LTR Pao 0 224 77 1 730 763 139 0 14 chrUextra 19065457 19065603 -9939053 + ARS406_DM Unknown Unknown 13 156 -197 1 730 2207 175 34 15 chrUextra 19065609 19066142 -9938514 - SAR_DM Satellite Satellite -684 788 246 1 730 2760 193 11 31 chrUextra 19066248 19066930 -9937726 + SAR_DM Satellite Satellite 1 668 -208 1 730 441 339 37 33 chrUextra 19067259 19067716 -9936940 + Copia2_I LTR Copia 2452 2910 -1252 1 730 995 50 7 0 chrUextra 19067818 19067957 -9936699 + ARS406_DM Unknown Unknown 50 189 -164 1 730 2875 188 9 6 chrUextra 19067835 19068504 -9936152 - SAR_DM Satellite Satellite -535 937 267 1 730 2889 173 12 13 chrUextra 19068607 19069285 -9935371 + SAR_DM Satellite Satellite 282 958 -514 1 730 5557 20 1 3 chrUextra 19069391 19070078 -9934578 - R1_DM LINE R1 -979 4377 3692 1 730 2023 198 94 37 chrUextra 19070178 19070855 -9933801 - Gypsy12_LTR LTR Gypsy -354 1982 1267 1 730 4472 2 0 0 chrUextra 19071752 19072264 -9932392 - LSU-rRNA_Dme rRNA rRNA -1601 2299 1788 1 730 987 15 15 8 chrUextra 19072308 19072439 -9932217 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1657 1 730 2323 110 4 35 chrUextra 19072540 19073226 -9931430 + DMSAT6 Satellite Satellite 1 664 -74 1 730 2647 187 23 13 chrUextra 19073326 19074013 -9930643 + SAR_DM Satellite Satellite 301 994 -478 1 730 5635 20 10 1 chrUextra 19074116 19074800 -9929856 + BEL_I LTR Pao 3977 4666 -738 1 730 5696 4 3 3 chrUextra 19074900 19075587 -9929069 - ACCORD_I LTR Gypsy -3051 3237 2551 1 730 2940 89 35 7 chrUextra 19075715 19076167 -9928489 + Gypsy12A_LTR LTR Gypsy 1816 2280 0 1 730 896 138 24 53 chrUextra 19076167 19076374 -9928282 + Gypsy12_I LTR Gypsy 1 201 -5345 1 730 2901 165 25 13 chrUextra 19076474 19077156 -9927500 - SAR_DM Satellite Satellite -451 1021 332 1 730 5985 0 0 1 chrUextra 19078048 19078735 -9925921 + SSU-rRNA_Dme rRNA rRNA 473 1158 -837 1 730 2591 179 25 22 chrUextra 19078837 19079504 -9925152 - SAR_DM Satellite Satellite -619 853 185 1 730 562 175 8 0 chrUextra 19079402 19079522 -9925134 + ARS406_DM Unknown Unknown 1 121 -232 1 730 5802 0 1 0 chrUextra 19079622 19080309 -9924347 - ROO_I LTR Pao -4420 3836 3149 1 730 5832 4 3 3 chrUextra 19080409 19081096 -9923560 - SSU-rRNA_Dme rRNA rRNA -660 1335 649 1 730 5467 23 0 0 chrUextra 19081196 19081883 -9922773 + STALKER4_I LTR Gypsy 2770 3456 -3074 1 730 1725 302 13 13 chrUextra 19081983 19082670 -9921986 - FROGGER_I LTR Copia -481 1596 910 1 730 4576 32 9 9 chrUextra 19082827 19083457 -9921199 + STALKER4_I LTR Gypsy 839 1660 -4870 1 730 720 0 0 0 chrUextra 19083560 19083640 -9921016 + (CTTAT)n Simple_repeat Simple_repeat 3 82 0 1 730 299 192 20 29 chrUextra 19084344 19084446 -9920210 + XDMR_DM Unknown Unknown 260 360 0 1 730 2492 172 57 28 chrUextra 19084361 19085031 -9919625 - SAR_DM Satellite Satellite -354 1118 430 1 730 6011 1 0 0 chrUextra 19085131 19085818 -9918838 + SSU-rRNA_Dme rRNA rRNA 446 1132 -863 1 730 5907 0 0 0 chrUextra 19085918 19086605 -9918051 - Copia_I LTR Copia -3431 1162 476 1 730 5882 0 1 4 chrUextra 19086705 19087392 -9917264 + SSU-rRNA_Dme rRNA rRNA 786 1470 -525 1 730 2747 176 13 24 chrUextra 19087499 19088179 -9916477 - SAR_DM Satellite Satellite -354 1118 446 1 730 5801 1 0 1 chrUextra 19088279 19088966 -9915690 + LSU-rRNA_Dme rRNA rRNA 434 1119 -2781 1 730 5884 3 1 3 chrUextra 19089066 19089753 -9914903 - SSU-rRNA_Dme rRNA rRNA -345 1650 965 1 730 5403 0 0 0 chrUextra 19089920 19090540 -9914116 + FW_DM LINE Jockey 3723 4342 -350 1 730 5900 6 9 0 chrUextra 19090640 19091327 -9913329 - LSU-rRNA_Dme rRNA rRNA -13 3887 3195 1 730 655 186 7 14 chrUextra 19091569 19091711 -9912945 + HETRP_DM Satellite Satellite 1529 1669 -203 1 730 210 37 0 0 chrUextra 19091869 19091896 -9912760 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 730 511 193 16 16 chrUextra 19091896 19092017 -9912639 + HETRP_DM Satellite Satellite 1549 1669 -203 1 730 4779 59 0 3 chrUextra 19092218 19092901 -9911755 - BATUMI_I LTR Pao -1146 6768 5845 1 730 1220 26 0 7 chrUextra 19093001 19093153 -9911503 + R1_DM LINE R1 5206 5356 0 1 730 3668 64 4 4 chrUextra 19093186 19093688 -9910968 + R1_DM LINE R1 1 502 -4854 1 730 3023 157 18 15 chrUextra 19093791 19094457 -9910199 - SAR_DM Satellite Satellite -435 1037 370 1 730 199 190 35 0 chrUextra 19094575 19094633 -9910023 + GA-rich Low_complexity Low_complexity 5 64 0 1 730 563 19 120 0 chrUextra 19094628 19094786 -9909870 + (GA)n Simple_repeat Simple_repeat 2 178 0 1 730 292 185 122 12 chrUextra 19095388 19095470 -9909186 - BS LINE Jockey -1894 3232 3142 1 730 1196 244 6 9 chrUextra 19095726 19096045 -9908611 - BS LINE Jockey -2328 2798 2481 1 730 34 24 0 0 chrUextra 19096312 19096353 -9908303 + AT_rich Low_complexity Low_complexity 1 41 0 1 730 4630 64 42 39 chrUextra 19096936 19097623 -9907033 - CIRCE LINE Composite -5462 894 206 1 730 5729 1 4 4 chrUextra 19097729 19098410 -9906246 - LSU-rRNA_Dme rRNA rRNA -2115 1785 1105 1 730 5942 1 0 0 chrUextra 19099297 19099984 -9904672 - R1_DM LINE R1 -3220 2136 1450 1 730 5932 1 0 0 chrUextra 19100085 19100771 -9903885 + R1_DM LINE R1 1305 1990 -3366 1 730 5827 3 1 4 chrUextra 19100871 19101558 -9903098 + LSU-rRNA_Dme rRNA rRNA 736 1420 -2480 1 730 5608 28 3 0 chrUextra 19101658 19102344 -9902312 - R1_DM LINE R1 -384 4972 4285 1 730 914 102 0 0 chrUextra 19102445 19102592 -9902064 - ARS406_DM Unknown Unknown -206 147 1 1 730 1996 166 7 9 chrUextra 19102592 19103132 -9901524 + SAR_DM Satellite Satellite 1 685 -796 1 730 226 0 0 0 chrUextra 19103232 19103259 -9901397 + NTS_DM Other Other 175 201 -39 1 730 840 9 0 35 chrUextra 19103311 19103424 -9901232 + NTS_DM Other Other 25 133 -107 1 730 1252 18 0 6 chrUextra 19103424 19103589 -9901067 + NTS_DM Other Other 38 201 -39 1 730 21 57 0 0 chrUextra 19103589 19103624 -9901032 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 832 9 9 27 chrUextra 19103650 19103761 -9900895 + NTS_DM Other Other 25 133 -107 1 730 787 0 0 10 chrUextra 19103761 19103858 -9900798 + NTS_DM Other Other 38 133 -107 1 730 486 33 0 0 chrUextra 19103858 19103919 -9900737 + NTS_DM Other Other 38 98 -142 1 730 5918 0 0 0 chrUextra 19104019 19104706 -9899950 - Invader3_I LTR Gypsy -2773 2115 1429 1 730 5677 10 1 0 chrUextra 19104806 19105493 -9899163 - MDG1_I LTR Gypsy -2868 3728 3041 1 730 5919 3 3 1 chrUextra 19105593 19106280 -9898376 + SSU-rRNA_Dme rRNA rRNA 1163 1850 -145 1 730 4731 5 0 0 chrUextra 19106380 19106943 -9897713 + DOC LINE Jockey 4163 4725 0 1 730 22 0 0 0 chrUextra 19107014 19107036 -9897620 + AT_rich Low_complexity Low_complexity 1 22 0 1 730 756 26 0 9 chrUextra 19107167 19107281 -9897375 + NTS_DM Other Other 89 201 -39 1 730 21 57 0 0 chrUextra 19107281 19107316 -9897340 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 832 9 9 27 chrUextra 19107342 19107453 -9897203 + NTS_DM Other Other 25 133 -107 1 730 1408 20 20 20 chrUextra 19107453 19107656 -9897000 + NTS_DM Other Other 38 240 0 1 730 1513 20 5 5 chrUextra 19107656 19107854 -9896802 + NTS_DM Other Other 1 198 -42 1 730 707 33 0 0 chrUextra 19107954 19108045 -9896611 - NTS_DM Other Other -112 128 38 1 730 817 0 0 0 chrUextra 19108045 19108141 -9896515 - NTS_DM Other Other -107 133 38 1 730 832 9 9 27 chrUextra 19108141 19108252 -9896404 - NTS_DM Other Other -107 133 25 1 730 21 57 0 0 chrUextra 19108278 19108313 -9896343 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 1252 18 0 6 chrUextra 19108313 19108478 -9896178 - NTS_DM Other Other -39 201 38 1 730 1128 8 0 0 chrUextra 19108478 19108611 -9896045 - NTS_DM Other Other -107 133 1 1 730 201 221 0 0 chrUextra 19108742 19108810 -9895846 + (TTATG)n Simple_repeat Simple_repeat 2 69 0 1 730 5255 0 0 2 chrUextra 19108816 19109428 -9895228 + FW_DM LINE Jockey 1 611 -4081 1 730 2949 170 10 10 chrUextra 19109528 19110199 -9894457 + SAR_DM Satellite Satellite 267 937 -535 1 730 993 58 0 0 chrUextra 19110076 19110215 -9894441 - ARS406_DM Unknown Unknown -164 189 51 1 730 262 106 0 21 chrUextra 19110665 19110713 -9893943 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 730 351 49 65 16 chrUextra 19110735 19110797 -9893859 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 730 697 193 0 7 chrUextra 19110796 19110942 -9893714 - DMLTR5 LTR Gypsy 0 266 122 1 730 2466 35 6 0 chrUextra 19111126 19111441 -9893215 + PROTOP DNA P 4164 4480 0 1 730 1620 7 0 0 chrUextra 19111893 19112175 -9892481 + (TATAA)n Simple_repeat Simple_repeat 1 282 0 1 730 2755 6 0 0 chrUextra 19112175 19112495 -9892161 - MAX_LTR LTR Pao -1 320 1 1 730 680 0 0 0 chrUextra 19112495 19112576 -9892080 - MAX_I LTR Pao 0 7914 7834 1 730 2908 25 3 0 chrUextra 19112676 19113030 -9891626 - DIVER2_LTR LTR Pao -30 355 1 1 730 2715 24 3 0 chrUextra 19113030 19113363 -9891293 - DIVER2_I LTR Pao 0 4147 3814 1 730 5887 0 1 4 chrUextra 19113463 19114150 -9890506 + SSU-rRNA_Dme rRNA rRNA 807 1491 -504 1 730 5852 0 1 1 chrUextra 19114250 19114937 -9889719 - R1_DM LINE R1 -2010 3346 2660 1 730 2565 191 29 27 chrUextra 19115037 19115724 -9888932 - SAR_DM Satellite Satellite -639 688 1 1 730 2637 189 6 21 chrUextra 19115824 19116483 -9888173 + SAR_DM Satellite Satellite 470 1118 -354 1 730 396 180 18 26 chrUextra 19116397 19116511 -9888145 - XDMR_DM Unknown Unknown 0 360 248 1 730 5930 1 1 1 chrUextra 19116611 19117298 -9887358 + SSU-rRNA_Dme rRNA rRNA 606 1292 -703 1 730 4193 79 144 19 chrUextra 19117399 19118085 -9886571 + Gypsy12_I LTR Gypsy 4765 5536 -10 1 730 3078 172 16 9 chrUextra 19118185 19118872 -9885784 + SAR_DM Satellite Satellite 377 1068 -404 1 730 650 99 292 5 chrUextra 19118972 19119157 -9885499 + PROTOP DNA P 469 707 -3773 1 730 402 108 0 0 chrUextra 19119158 19119223 -9885433 + PROTOP DNA P 1009 1073 -3407 1 730 2561 96 116 7 chrUextra 19119219 19119658 -9884998 + PROTOP DNA P 3960 4446 -34 1 730 5557 29 0 0 chrUextra 19119759 19120446 -9884210 - R1_DM LINE R1 -2471 2885 2199 1 730 2729 181 12 26 chrUextra 19120546 19121232 -9883424 + SAR_DM Satellite Satellite 438 1113 -359 1 730 34 24 0 0 chrUextra 19122362 19122403 -9882253 + AT_rich Low_complexity Low_complexity 1 41 0 1 730 2770 171 45 22 chrUextra 19122908 19123594 -9881062 - SAR_DM Satellite Satellite -563 909 208 1 730 23 54 0 0 chrUextra 19123828 19123865 -9880791 + AT_rich Low_complexity Low_complexity 1 37 0 1 730 21 36 0 0 chrUextra 19124254 19124282 -9880374 + AT_rich Low_complexity Low_complexity 1 28 0 1 730 5761 0 0 1 chrUextra 19124481 19125168 -9879488 - ROO_I LTR Pao -4660 3596 2911 1 730 2673 168 12 26 chrUextra 19125268 19125927 -9878729 + SAR_DM Satellite Satellite 469 1118 -354 1 730 428 188 9 18 chrUextra 19125841 19125955 -9878701 - XDMR_DM Unknown Unknown 0 360 248 1 730 5673 3 0 1 chrUextra 19126055 19126742 -9877914 + DM176_I LTR Gypsy 5265 5950 -470 1 730 5129 53 3 7 chrUextra 19126842 19127529 -9877127 + BATUMI_I LTR Pao 3305 3988 -3975 1 730 2810 59 5 0 chrUextra 19127629 19128003 -9876653 - Baggins1 LINE LOA -287 5166 4791 1 730 1122 46 0 25 chrUextra 19128159 19128316 -9876340 - R1_DM LINE R1 -3113 2243 2091 1 730 1547 34 6 3 chrUextra 19128417 19128774 -9875882 + (CTTAT)n Simple_repeat Simple_repeat 1 357 0 1 730 6012 1 0 0 chrUextra 19129205 19129890 -9874766 + SSU-rRNA_Dme rRNA rRNA 301 985 -1010 1 730 3466 0 0 2 chrUextra 19129990 19130388 -9874268 - ROO_LTR LTR Pao -31 397 1 1 730 2272 7 3 0 chrUextra 19130388 19130677 -9873979 - ROO_I LTR Pao 0 8256 7967 1 730 2568 19 19 0 chrUextra 19130777 19131101 -9873555 + FW_DM LINE Jockey 4363 4692 0 1 730 2732 58 3 3 chrUextra 19131102 19131464 -9873192 - R1_DM LINE R1 -3963 1393 1032 1 730 5889 1 0 1 chrUextra 19131564 19132251 -9872405 + LSU-rRNA_Dme rRNA rRNA 586 1271 -2629 1 730 5759 13 0 3 chrUextra 19132351 19133038 -9871618 + R1_DM LINE R1 1912 2596 -2760 1 730 301 0 23 0 chrUextra 19133138 19133182 -9871474 + NTS_DM Other Other 89 133 -107 1 730 1234 24 0 6 chrUextra 19133182 19133347 -9871309 + NTS_DM Other Other 38 201 -39 1 730 21 57 0 0 chrUextra 19133347 19133382 -9871274 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 832 9 9 27 chrUextra 19133408 19133519 -9871137 + NTS_DM Other Other 25 133 -107 1 730 817 0 0 0 chrUextra 19133519 19133615 -9871041 + NTS_DM Other Other 38 133 -107 1 730 1387 25 20 20 chrUextra 19133615 19133818 -9870838 + NTS_DM Other Other 38 240 0 1 730 489 70 0 0 chrUextra 19133926 19133997 -9870659 - ARS406_DM Unknown Unknown -282 71 1 1 730 2814 183 18 13 chrUextra 19133935 19134612 -9870044 + SAR_DM Satellite Satellite 224 903 -569 1 730 2542 73 25 13 chrUextra 19134712 19135399 -9869257 - DMSAT6 Satellite Satellite -107 695 1 1 730 2763 183 14 6 chrUextra 19135499 19136158 -9868498 - SAR_DM Satellite Satellite -436 1036 373 1 91 2571 202 28 6 chrUextra 19136297 19136973 -9867683 + SAR_DM Satellite Satellite 224 914 -558 1 731 2649 189 8 21 chrUextra 19137073 19137743 -9866913 + SAR_DM Satellite Satellite 459 1119 -353 1 731 386 200 11 0 chrUextra 19137665 19137760 -9866896 - XDMR_DM Unknown Unknown -7 353 258 1 731 600 287 13 13 chrUextra 19137888 19138192 -9866464 - Copia_I LTR Copia -2314 2279 1976 1 731 2694 45 20 3 chrUextra 19138192 19138547 -9866109 + BS2 LINE Jockey 2722 3082 -1639 1 731 5637 0 3 1 chrUextra 19138684 19139334 -9865322 - LSU-rRNA_Dme rRNA rRNA 0 3900 3250 1 731 2633 19 0 3 chrUextra 19139434 19139751 -9864905 + CIRCE LINE Composite 1567 1882 -4474 1 731 529 289 53 53 chrUextra 19139760 19139827 -9864829 + Gypsy12_I LTR Gypsy 3835 4195 -1351 1 731 2348 21 0 20 chrUextra 19139827 19140121 -9864535 + CIRCE LINE Composite 1888 2175 -4181 1 731 636 305 39 23 chrUextra 19140239 19140725 -9863931 - BLOOD_I LTR Gypsy -4348 2265 1772 1 731 2911 44 0 0 chrUextra 19141008 19141372 -9863284 + MAX_I LTR Pao 4523 4886 -3028 1 731 2584 31 0 0 chrUextra 19141373 19141695 -9862961 + MAX_I LTR Pao 5025 5346 -2568 1 731 5545 22 4 0 chrUextra 19141795 19142481 -9862175 + STALKER4_I LTR Gypsy 1768 2456 -4074 1 731 5659 7 1 0 chrUextra 19142582 19143269 -9861387 + STALKER4_I LTR Gypsy 5582 6269 -261 1 731 1187 7 0 0 chrUextra 19143369 19143507 -9861149 - LSU-rRNA_Dme rRNA rRNA -1123 2777 2640 1 731 4677 4 2 2 chrUextra 19143509 19144056 -9860600 - R1_DM LINE R1 0 5356 4810 1 731 1617 191 24 8 chrUextra 19144161 19144843 -9859813 - SAR_DM Satellite Satellite -535 692 1 1 731 5467 22 23 1 chrUextra 19144943 19145630 -9859026 + STALKER4_I LTR Gypsy 4296 4997 -1533 1 731 6001 0 0 0 chrUextra 19145730 19146417 -9858239 - ROO_I LTR Pao -545 7711 7025 1 731 2911 179 6 8 chrUextra 19146520 19147179 -9857477 - SAR_DM Satellite Satellite -620 852 195 1 731 727 102 0 0 chrUextra 19147086 19147204 -9857452 + ARS406_DM Unknown Unknown 1 118 -235 1 731 3000 181 9 9 chrUextra 19147304 19147991 -9856665 + SAR_DM Satellite Satellite 370 1056 -416 1 731 3092 159 13 15 chrUextra 19148095 19148778 -9855878 - SAR_DM Satellite Satellite -496 976 295 1 731 4150 65 27 3 chrUextra 19148880 19149464 -9855192 + R1_DM LINE R1 136 733 -4623 1 731 785 67 0 0 chrUextra 19149460 19149565 -9855091 + R1_DM LINE R1 1224 1328 -4028 1 731 1176 0 0 0 chrUextra 19149677 19149812 -9854844 - 5S_DM RNA RNA 0 135 1 1 731 1176 0 0 0 chrUextra 19150043 19150178 -9854478 - 5S_DM RNA RNA 0 135 1 1 731 5286 22 96 0 chrUextra 19150452 19151139 -9853517 + FW_DM LINE Jockey 3130 3882 -810 1 731 2126 28 0 0 chrUextra 19151240 19151495 -9853161 - Gypsy4_LTR LTR Gypsy -32 255 1 1 731 3734 7 0 0 chrUextra 19151495 19151926 -9852730 - Gypsy4_I LTR Gypsy 0 6288 5858 1 731 2673 181 18 25 chrUextra 19152026 19152707 -9851949 - SAR_DM Satellite Satellite -315 1157 482 1 731 5009 28 15 0 chrUextra 19152882 19153500 -9851156 + CIRCE LINE Composite 5428 6054 -302 1 731 2488 253 0 0 chrUextra 19153646 19154286 -9850370 - G6_DM LINE Jockey -715 1327 688 1 731 34 24 0 0 chrUextra 19154600 19154641 -9850015 + AT_rich Low_complexity Low_complexity 1 41 0 1 731 21 95 0 0 chrUextra 19154854 19154917 -9849739 + AT_rich Low_complexity Low_complexity 1 63 0 1 731 1223 0 0 7 chrUextra 19154929 19155074 -9849582 + LSU-rRNA_Dme rRNA rRNA 1 144 -3756 1 731 1315 53 5 42 chrUextra 19155174 19155386 -9849270 - BATUMI_I LTR Pao -758 7205 7002 1 731 2597 6 95 6 chrUextra 19155386 19155861 -9848795 - BATUMI_I LTR Pao 0 7963 7447 1 731 792 340 19 12 chrUextra 19155961 19156443 -9848213 + Gypsy_I LTR Gypsy 4496 4980 -1527 1 731 5520 25 3 1 chrUextra 19156748 19157435 -9847221 - R1_DM LINE R1 -1468 3888 3201 1 731 3035 167 10 13 chrUextra 19157549 19158221 -9846435 - SAR_DM Satellite Satellite -396 1076 407 1 731 561 68 0 0 chrUextra 19158324 19158398 -9846258 + (GAAAA)n Simple_repeat Simple_repeat 4 77 0 1 731 6023 0 1 0 chrUextra 19159110 19159796 -9844860 - LSU-rRNA_Dme rRNA rRNA -10 3890 3204 1 731 5968 0 0 0 chrUextra 19159896 19160583 -9844073 - R1_DM LINE R1 -2901 2455 1769 1 731 5521 16 6 12 chrUextra 19160683 19161370 -9843286 + FW_DM LINE Jockey 3954 4636 -56 1 731 4158 12 25 12 chrUextra 19161470 19161989 -9842667 - QUASIMODO_I LTR Gypsy -5534 526 1 1 731 1374 6 0 6 chrUextra 19161989 19162157 -9842499 - QUASIMODO_LTR LTR Gypsy 0 658 492 1 731 2470 3 0 0 chrUextra 19162257 19162541 -9842115 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 1 731 3484 7 0 0 chrUextra 19162539 19162944 -9841712 - R1_DM LINE R1 0 5356 4952 1 731 861 0 31 24 chrUextra 19163045 19163172 -9841484 + NTS_DM Other Other 113 240 0 1 731 1847 4 17 13 chrUextra 19163172 19163411 -9841245 + NTS_DM Other Other 1 240 0 1 731 1301 6 0 18 chrUextra 19163411 19163576 -9841080 + NTS_DM Other Other 1 162 -78 1 731 312 67 0 0 chrUextra 19163686 19163731 -9840925 + NTS_DM Other Other 4 48 -192 1 731 692 105 0 0 chrUextra 19163831 19163945 -9840711 - ARS406_DM Unknown Unknown -239 114 1 1 731 2796 186 6 6 chrUextra 19163852 19164505 -9840151 + SAR_DM Satellite Satellite 195 847 -625 1 731 241 119 24 0 chrUextra 19164473 19164515 -9840141 - ARS406_DM Unknown Unknown -164 189 147 1 731 991 176 49 10 chrUextra 19164618 19165296 -9839360 - SAR_DM Satellite Satellite -865 704 1 1 731 5947 9 0 0 chrUextra 19165405 19166092 -9838564 - Invader1_I LTR Gypsy -2037 1149 463 1 731 1370 26 11 0 chrUextra 19166192 19166382 -9838274 + STALKER4_I LTR Gypsy 6339 6530 0 1 731 799 61 0 0 chrUextra 19166382 19166497 -9838159 + STALKER4_LTR LTR Gypsy 1 115 -287 1 731 2664 3 0 3 chrUextra 19166479 19166800 -9837856 + BARI_DM DNA Tc1 1408 1727 -1 1 731 655 0 13 0 chrUextra 19166800 19166879 -9837777 + BARI_DM DNA Tc1 4 83 -1645 1 731 5709 12 3 1 chrUextra 19166979 19167666 -9836990 + FW_DM LINE Jockey 3900 4587 -105 1 731 5960 1 0 0 chrUextra 19167766 19168453 -9836203 - FW_DM LINE Jockey -818 3874 3188 1 731 1249 14 0 0 chrUextra 19168553 19168698 -9835958 - LSU-rRNA_Dme rRNA rRNA -1178 2722 2578 1 731 4767 0 0 2 chrUextra 19168694 19169240 -9835416 - R2_DM LINE R2 -6 3601 3057 1 731 1422 33 0 0 chrUextra 19169658 19169838 -9834818 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 1 731 613 181 0 11 chrUextra 19169845 19170024 -9834632 + (TCTTG)n Simple_repeat Simple_repeat 2 178 0 1 731 3673 5 0 0 chrUextra 19170129 19170552 -9834104 + R2_DM LINE R2 3185 3607 0 1 731 2195 12 0 0 chrUextra 19170560 19170814 -9833842 + LSU-rRNA_Dme rRNA rRNA 2578 2831 -1069 1 731 3445 17 2 0 chrUextra 19170914 19171331 -9833325 - PROTOP_A DNA P -687 418 1 1 731 1148 122 0 6 chrUextra 19171331 19171512 -9833144 - TART LINE telomeric -7545 6932 6753 1 731 2857 174 38 15 chrUextra 19172492 19173173 -9831483 - SAR_DM Satellite Satellite -581 891 195 1 731 34 24 0 0 chrUextra 19173690 19173731 -9830925 + AT_rich Low_complexity Low_complexity 1 41 0 1 731 3014 176 9 7 chrUextra 19174064 19174747 -9829909 + SAR_DM Satellite Satellite 195 878 -594 1 731 2408 168 19 13 chrUextra 19174848 19175530 -9829126 - SAR_DM Satellite Satellite -684 685 1 1 731 2931 180 9 10 chrUextra 19175638 19176316 -9828340 - SAR_DM Satellite Satellite -514 958 282 1 731 5280 33 3 3 chrUextra 19176443 19177105 -9827551 - R1_DM LINE R1 0 5356 4695 1 731 5940 4 0 0 chrUextra 19177205 19177891 -9826765 - R1_DM LINE R1 -457 4899 4214 1 731 2373 191 38 9 chrUextra 19177991 19178677 -9825979 - SAR_DM Satellite Satellite -219 1253 295 1 731 2925 179 7 16 chrUextra 19178777 19179463 -9825193 + SAR_DM Satellite Satellite 333 1012 -460 1 731 2897 183 12 9 chrUextra 19179563 19180248 -9824408 + SAR_DM Satellite Satellite 209 895 -577 1 731 5906 0 0 0 chrUextra 19180349 19181035 -9823621 - Gypsy4_I LTR Gypsy -924 5364 4679 1 731 4825 66 50 0 chrUextra 19181135 19181821 -9822835 + TART LINE telomeric 1287 2006 -12471 1 731 301 25 25 0 chrUextra 19181921 19181961 -9822695 + ARS406_DM Unknown Unknown 149 189 -164 1 731 2659 189 9 12 chrUextra 19181929 19182587 -9822069 - SAR_DM Satellite Satellite -625 847 192 1 731 638 88 0 34 chrUextra 19182489 19182607 -9822049 + ARS406_DM Unknown Unknown 1 114 -239 1 731 2746 188 18 21 chrUextra 19182708 19183393 -9821263 + SAR_DM Satellite Satellite 1 683 -208 1 731 246 150 0 0 chrUextra 19183536 19183576 -9821080 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 246 150 0 0 chrUextra 19183628 19183668 -9820988 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 246 150 0 0 chrUextra 19183720 19183760 -9820896 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 246 150 0 0 chrUextra 19183812 19183852 -9820804 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 22 56 0 0 chrUextra 19183857 19183893 -9820763 + AT_rich Low_complexity Low_complexity 1 36 0 1 731 1816 5 0 5 chrUextra 19183965 19184179 -9820477 - LSU-rRNA_Dme rRNA rRNA 0 3900 3688 1 731 3066 178 6 7 chrUextra 19184285 19184965 -9819691 + SAR_DM Satellite Satellite 195 873 -599 1 731 5774 3 0 3 chrUextra 19185065 19185751 -9818905 + DOC LINE Jockey 1168 1851 -2874 1 731 1935 195 59 11 chrUextra 19185854 19186536 -9818120 - SAR_DM Satellite Satellite -487 715 1 1 731 222 91 0 0 chrUextra 19186922 19186955 -9817701 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 731 3099 26 3 3 chrUextra 19187423 19187810 -9816846 + R1_DM LINE R1 3528 3914 -1442 1 731 2163 54 53 7 chrUextra 19187809 19188109 -9816547 + R1_DM LINE R1 268 581 -4775 1 731 34 24 0 0 chrUextra 19188742 19188783 -9815873 + AT_rich Low_complexity Low_complexity 1 41 0 1 731 5462 39 3 0 chrUextra 19188995 19189681 -9814975 + DMCR1A LINE CR1 964 1651 -2819 1 731 5730 25 0 0 chrUextra 19189781 19190467 -9814189 + DIVER_I LTR Pao 800 1485 -4158 1 731 1195 13 0 19 chrUextra 19190567 19190722 -9813934 + NTS_DM Other Other 11 162 -78 1 731 488 119 36 0 chrUextra 19190832 19190916 -9813740 + NTS_DM Other Other 4 90 -150 1 731 28 48 0 0 chrUextra 19191189 19191231 -9813425 + AT_rich Low_complexity Low_complexity 1 42 0 1 731 5869 3 1 1 chrUextra 19191353 19192039 -9812617 + DMRT1A LINE R1 3810 4495 -688 1 731 5860 0 3 4 chrUextra 19192139 19192825 -9811831 - SSU-rRNA_Dme rRNA rRNA -200 1795 1111 1 731 2584 194 21 30 chrUextra 19192927 19193611 -9811045 + SAR_DM Satellite Satellite 1 678 -361 1 731 5811 12 4 0 chrUextra 19194498 19195183 -9809473 + Copia2_I LTR Copia 2559 3246 -916 1 731 3201 15 3 0 chrUextra 19195286 19195675 -9808981 + Copia2_I LTR Copia 1093 1482 -2680 1 731 247 0 127 0 chrUextra 19195905 19195968 -9808688 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 731 5946 0 0 3 chrUextra 19196069 19196755 -9807901 + SSU-rRNA_Dme rRNA rRNA 493 1176 -819 1 731 1830 145 38 26 chrUextra 19196855 19197246 -9807410 - STALKER4_I LTR Gypsy -5787 743 235 1 731 2227 15 0 0 chrUextra 19197277 19197541 -9807115 - STALKER4_LTR LTR Gypsy -53 349 86 1 731 282 320 38 38 chrUextra 19197644 19198039 -9806617 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 731 4635 48 3 54 chrUextra 19198427 19199113 -9805543 - BATUMI_I LTR Pao -5137 2826 2176 1 731 5446 25 32 1 chrUextra 19199213 19199899 -9804757 - R1_DM LINE R1 -1731 3625 2919 1 731 32 0 0 0 chrUextra 19200310 19200342 -9804314 + AT_rich Low_complexity Low_complexity 1 32 0 1 731 1822 5 0 0 chrUextra 19200474 19200685 -9803971 + SSU-rRNA_Dme rRNA rRNA 1 211 -1784 1 731 5516 0 0 0 chrUextra 19200822 19201471 -9803185 + LSU-rRNA_Dme rRNA rRNA 218 866 -3034 1 731 5518 28 1 9 chrUextra 19201571 19202257 -9802399 - BATUMI_I LTR Pao -1643 6320 5640 1 731 2229 117 13 38 chrUextra 19202357 19203041 -9801615 + DMSAT6 Satellite Satellite 1 666 -74 1 731 1419 29 0 0 chrUextra 19203143 19203318 -9801338 + CIRCE LINE Composite 1708 1882 -4474 1 731 579 296 42 57 chrUextra 19203327 19203729 -9800927 + Gypsy12_I LTR Gypsy 3835 4230 -1316 1 731 3342 24 9 21 chrUextra 19203394 19203826 -9800830 + CIRCE LINE Composite 1888 2314 -4042 1 731 5609 18 0 9 chrUextra 19203929 19204615 -9800041 + Gypsy2_I LTR Gypsy 1928 2607 -3528 1 731 2725 171 32 22 chrUextra 19204720 19205401 -9799255 - SAR_DM Satellite Satellite -532 940 253 1 731 4843 31 136 1 chrUextra 19205502 19206187 -9798469 + IDEFIX_I LTR Gypsy 118 894 -4734 1 731 5099 26 57 0 chrUextra 19206287 19206973 -9797683 + Invader2_I LTR Gypsy 2483 3207 -1385 1 731 740 98 8 0 chrUextra 19207073 19207195 -9797461 - ARS406_DM Unknown Unknown -230 123 1 1 731 2829 178 12 9 chrUextra 19207099 19207758 -9796898 + SAR_DM Satellite Satellite 192 852 -620 1 731 2593 198 24 23 chrUextra 19207862 19208544 -9796112 + SAR_DM Satellite Satellite 1 682 -216 1 731 3368 5 7 7 chrUextra 19208739 19209153 -9795503 + DM297_LTR LTR Gypsy 1 414 0 1 731 1395 23 0 6 chrUextra 19209153 19209331 -9795325 + DM297_I LTR Gypsy 1 177 -5990 1 731 21 89 0 0 chrUextra 19210801 19210857 -9793799 + AT_rich Low_complexity Low_complexity 1 56 0 1 731 230 0 0 0 chrUextra 19210876 19210903 -9793753 - SSU-rRNA_Dme rRNA rRNA 0 1995 1969 1 731 2203 201 106 15 chrUextra 19211003 19211689 -9792967 - TART LINE telomeric -3927 10550 9802 1 731 5823 1 0 0 chrUextra 19211789 19212475 -9792181 + LSU-rRNA_Dme rRNA rRNA 400 1085 -2815 1 731 920 63 7 20 chrUextra 19212575 19213261 -9791395 + RSP Satellite Satellite 1 677 0 1 731 5463 31 3 0 chrUextra 19213361 19214047 -9790609 + MDG1_I LTR Gypsy 3408 4095 -2501 1 731 5989 3 1 0 chrUextra 19214147 19214833 -9789823 + BEL_I LTR Pao 4346 5032 -372 1 731 5176 2 0 3 chrUextra 19215022 19215619 -9789037 + SSU-rRNA_Dme rRNA rRNA 1 595 -1400 1 731 2883 194 9 20 chrUextra 19215719 19216405 -9788251 + SAR_DM Satellite Satellite 1 678 -227 1 731 240 353 0 0 chrUextra 19216634 19216736 -9787920 + G2_DM LINE Jockey 281 382 -2720 1 731 1537 172 10 3 chrUextra 19216888 19217191 -9787465 + Gypsy2_I LTR Gypsy 5087 5391 -744 1 731 2464 80 13 26 chrUextra 19218077 19218763 -9785893 - DMSAT6 Satellite Satellite -66 676 1 1 731 2756 196 20 5 chrUextra 19218864 19219526 -9785130 - SAR_DM Satellite Satellite -555 917 246 1 731 346 143 0 0 chrUextra 19219486 19219549 -9785107 + ARS406_DM Unknown Unknown 1 63 -290 1 731 386 137 57 41 chrUextra 19219649 19219771 -9784885 + NTS_DM Other Other 117 240 0 1 731 1029 134 20 5 chrUextra 19219910 19220112 -9784544 + NTS_DM Other Other 1 205 -35 1 731 259 146 21 0 chrUextra 19220143 19220191 -9784465 + NTS_DM Other Other 1 49 -191 1 731 1460 33 0 0 chrUextra 19220435 19220618 -9784038 - FW_DM LINE Jockey -4509 183 1 1 731 3640 35 0 0 chrUextra 19220626 19221078 -9783578 + R1_DM LINE R1 1377 1828 -3528 1 731 356 67 0 0 chrUextra 19221076 19221121 -9783535 + R1_DM LINE R1 1317 1361 -3995 1 731 3235 11 0 0 chrUextra 19221221 19221599 -9783057 - DMRT1B LINE R1 -1270 3913 3536 1 731 1620 0 0 0 chrUextra 19221599 19221904 -9782752 + (CACAA)n Simple_repeat Simple_repeat 1 305 0 1 731 5565 16 0 4 chrUextra 19222008 19222693 -9781963 - MICROPIA_I LTR Gypsy -31 4445 3764 1 731 259 182 0 0 chrUextra 19222793 19222848 -9781808 - ARS406_DM Unknown Unknown -298 55 1 1 731 2970 178 11 8 chrUextra 19222810 19223479 -9781177 + SAR_DM Satellite Satellite 248 918 -554 1 731 5578 19 6 1 chrUextra 19223579 19224265 -9780391 + R1_DM LINE R1 3746 4434 -922 1 731 5438 28 1 1 chrUextra 19224365 19225051 -9779605 + DMRT1B LINE R1 328 1013 -4170 1 731 2388 92 13 15 chrUextra 19225152 19225837 -9778819 - DMSAT6 Satellite Satellite -17 684 1 1 731 2718 0 0 3 chrUextra 19225937 19226277 -9778379 + DM412 LTR Gypsy 6559 6897 0 1 731 3864 9 0 2 chrUextra 19226167 19226623 -9778033 + T412LTR LTR LTR 1 455 -26 1 731 5711 0 0 1 chrUextra 19226723 19227409 -9777247 + ROO_I LTR Pao 4638 5322 -2934 1 731 3280 147 16 36 chrUextra 19227509 19228195 -9776461 + TART LINE telomeric 9642 10313 -4164 1 731 1817 4 17 17 chrUextra 19228319 19228559 -9776097 - NTS_DM Other Other 0 240 1 1 731 1797 13 17 13 chrUextra 19228559 19228798 -9775858 - NTS_DM Other Other 0 240 1 1 731 1312 6 22 16 chrUextra 19228798 19228981 -9775675 - NTS_DM Other Other 0 240 57 1 731 1607 186 3 3 chrUextra 19229869 19230552 -9774104 + SAR_DM Satellite Satellite 1 683 -558 1 731 5483 22 50 1 chrUextra 19230653 19231337 -9773319 - BATUMI_I LTR Pao -2748 5215 4499 1 731 1365 141 106 16 chrUextra 19231449 19231817 -9772839 - DNAREP1_DM LINE Penelope -259 335 1 1 731 461 273 40 7 chrUextra 19231814 19232000 -9772656 - Gypsy_I LTR Gypsy -4497 2010 1797 1 731 610 43 0 0 chrUextra 19232228 19232321 -9772335 + FW_DM LINE Jockey 4600 4692 0 1 731 4009 52 119 2 chrUextra 19232317 19232911 -9771745 + Gypsy7_I LTR Gypsy 1489 2152 -2832 1 731 2182 114 21 12 chrUextra 19233029 19233697 -9770959 - DMSAT6 Satellite Satellite -6 674 1 1 731 2887 178 7 19 chrUextra 19233803 19234483 -9770173 - SAR_DM Satellite Satellite -382 1090 419 1 731 1098 23 0 0 chrUextra 19235140 19235269 -9769387 + (TCTTG)n Simple_repeat Simple_repeat 3 131 0 1 731 2960 42 5 0 chrUextra 19235506 19235883 -9768773 - STALKER4_LTR LTR Gypsy -23 379 1 1 731 1172 29 12 6 chrUextra 19235883 19236055 -9768601 - STALKER4_I LTR Gypsy 0 6530 6358 1 731 5341 45 1 1 chrUextra 19236155 19236841 -9767815 + R1_DM LINE R1 884 1569 -3787 1 731 4262 2 93 2 chrUextra 19236941 19237465 -9767191 + LSU-rRNA_Dme rRNA rRNA 2061 2632 -1268 1 731 1352 6 6 0 chrUextra 19237465 19237627 -9767029 + R1_DM LINE R1 1 163 -5193 1 731 5521 29 0 1 chrUextra 19237727 19238413 -9766243 + R1_DM LINE R1 2189 2873 -2483 1 731 5680 7 0 0 chrUextra 19238513 19239199 -9765457 - STALKER4_I LTR Gypsy -3231 3299 2614 1 731 2558 85 30 22 chrUextra 19239309 19239985 -9764671 + DMSAT6 Satellite Satellite 1 681 0 1 731 2716 184 15 23 chrUextra 19240085 19240770 -9763886 - SAR_DM Satellite Satellite -315 1157 479 1 731 4958 0 2 3 chrUextra 19240982 19241557 -9763099 - SSU-rRNA_Dme rRNA rRNA 0 1995 1422 1 731 4289 32 124 12 chrUextra 19242443 19243129 -9761527 - Gypsy12_LTR LTR Gypsy -316 2020 1258 1 731 32 0 0 0 chrUextra 19244106 19244138 -9760518 + AT_rich Low_complexity Low_complexity 1 32 0 1 731 28 48 0 0 chrUextra 19244466 19244508 -9760148 + AT_rich Low_complexity Low_complexity 1 42 0 1 731 21 0 0 0 chrUextra 19244897 19244918 -9759738 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 262 191 43 43 chrUextra 19245219 19245334 -9759322 + A-rich Low_complexity Low_complexity 3 117 0 1 731 1097 0 0 0 chrUextra 19245359 19245487 -9759169 + ROO_LTR LTR Pao 1 128 -300 1 731 5868 0 1 4 chrUextra 19245587 19246273 -9758383 - SSU-rRNA_Dme rRNA rRNA -472 1523 840 1 731 5480 9 4 0 chrUextra 19246373 19247059 -9757597 + STALKER4_I LTR Gypsy 5691 6379 -151 1 731 1176 0 0 0 chrUextra 19247266 19247401 -9757255 - 5S_DM RNA RNA 0 135 1 1 731 1176 0 0 0 chrUextra 19247632 19247767 -9756889 - 5S_DM RNA RNA 0 135 1 1 731 47 0 0 0 chrUextra 19248230 19248277 -9756379 + AT_rich Low_complexity Low_complexity 1 47 0 1 731 5742 1 3 1 chrUextra 19248731 19249417 -9755239 - R1_DM LINE R1 -3890 1466 780 1 731 3023 170 15 7 chrUextra 19249517 19250197 -9754459 + SAR_DM Satellite Satellite 256 940 -532 1 731 2564 25 3 0 chrUextra 19250303 19250620 -9754036 - R1_DM LINE R1 -3483 1873 1556 1 731 1631 66 0 0 chrUextra 19250631 19250844 -9753812 - R1_DM LINE R1 -3897 1459 1247 1 731 1035 42 0 7 chrUextra 19250846 19250989 -9753667 - R1_DM LINE R1 -4745 611 470 1 731 5861 1 0 0 chrUextra 19251089 19251775 -9752881 + DOC LINE Jockey 1195 1880 -2845 1 731 5489 15 42 1 chrUextra 19251875 19252561 -9752095 + R1_DM LINE R1 3666 4379 -977 1 731 2748 0 6 3 chrUextra 19252662 19252989 -9751667 + LSU-rRNA_Dme rRNA rRNA 1461 1788 -2112 1 731 2772 0 0 0 chrUextra 19253033 19253347 -9751309 + LSU-rRNA_Dme rRNA rRNA 1788 2101 -1799 1 731 2449 199 22 22 chrUextra 19253447 19254133 -9750523 - SAR_DM Satellite Satellite -1036 686 1 1 731 5955 0 0 1 chrUextra 19254236 19254919 -9749737 + SSU-rRNA_Dme rRNA rRNA 483 1164 -831 1 731 1224 72 86 5 chrUextra 19255033 19255230 -9749426 + Gypsy12_LTR LTR Gypsy 1108 1320 -1016 1 731 2886 39 36 34 chrUextra 19255258 19255705 -9748951 + Gypsy12_LTR LTR Gypsy 1480 1927 -409 1 731 1637 169 9 6 chrUextra 19255808 19256491 -9748165 + SAR_DM Satellite Satellite 1 684 -539 1 731 5892 7 1 0 chrUextra 19256591 19257277 -9747379 - Gypsy4_I LTR Gypsy -4952 1336 650 1 731 2761 182 9 9 chrUextra 19257377 19258027 -9746629 - SAR_DM Satellite Satellite -628 844 195 1 731 752 116 0 0 chrUextra 19257934 19258063 -9746593 + ARS406_DM Unknown Unknown 1 129 -224 1 731 2907 174 13 13 chrUextra 19258171 19258847 -9745809 + SAR_DM Satellite Satellite 195 870 -602 1 731 3043 0 3 0 chrUextra 19259735 19260084 -9744572 - LSU-rRNA_Dme rRNA rRNA -161 3739 3390 1 731 2881 3 3 0 chrUextra 19260088 19260421 -9744235 - LSU-rRNA_Dme rRNA rRNA -266 3634 3301 1 731 5575 9 1 3 chrUextra 19260521 19261207 -9743449 + Invader2_I LTR Gypsy 2399 3083 -1509 1 731 5867 6 0 0 chrUextra 19262093 19262779 -9741877 - MDG3_I LTR Gypsy -1554 3432 2747 1 731 1199 201 28 55 chrUextra 19263665 19264065 -9740591 + Gypsy_LTR LTR Gypsy 43 431 -51 1 731 583 73 0 0 chrUextra 19264196 19264278 -9740378 + Jockey2 LINE Jockey 1 82 -3346 1 731 308 121 29 43 chrUextra 19264282 19264351 -9740305 + Gypsy5_LTR LTR Gypsy 77 144 -286 1 731 5593 13 9 3 chrUextra 19264451 19265137 -9739519 + LSU-rRNA_Dme rRNA rRNA 1076 1765 -2135 1 731 1635 256 37 43 chrUextra 19265246 19265923 -9738733 + ROVER-I_DM LTR Gypsy 1455 2127 -4457 1 731 5621 13 1 9 chrUextra 19266023 19266709 -9737947 - Gypsy6_I LTR Gypsy -4681 2331 1651 1 731 35 63 0 0 chrUextra 19267339 19267402 -9737254 + AT_rich Low_complexity Low_complexity 1 63 0 1 732 1305 68 5 0 chrUextra 19267820 19268237 -9736419 + (CTTAT)n Simple_repeat Simple_repeat 1 419 0 1 732 285 130 0 0 chrUextra 19268381 19268427 -9736229 - ARS406_DM Unknown Unknown -185 168 123 1 732 2456 174 50 19 chrUextra 19268423 19269066 -9735590 + SAR_DM Satellite Satellite 200 862 -610 1 732 3287 21 2 16 chrUextra 19269167 19269595 -9735061 - DM176_I LTR Gypsy -5998 422 1 1 732 1158 84 111 50 chrUextra 19269595 19269853 -9734803 - DM176_LTR LTR Gypsy -27 480 221 1 732 2852 182 16 7 chrUextra 19270743 19271417 -9733239 - SAR_DM Satellite Satellite -569 903 224 1 732 382 116 14 0 chrUextra 19271356 19271425 -9733231 + ARS406_DM Unknown Unknown 1 70 -283 1 732 3010 179 9 7 chrUextra 19271532 19272208 -9732448 + SAR_DM Satellite Satellite 247 923 -549 1 732 5720 0 0 3 chrUextra 19272311 19272997 -9731659 - ROO_I LTR Pao -3268 4988 4305 1 732 5568 10 0 0 chrUextra 19273101 19273783 -9730873 + DM176_I LTR Gypsy 1356 2037 -4383 1 732 29 60 0 0 chrUextra 19274774 19274824 -9729832 + AT_rich Low_complexity Low_complexity 1 50 0 1 732 479 122 100 0 chrUextra 19274940 19275030 -9729626 + DNAREP1_DM LINE Penelope 496 594 0 1 732 26 50 0 0 chrUextra 19275084 19275124 -9729532 + AT_rich Low_complexity Low_complexity 1 40 0 1 732 21 71 0 0 chrUextra 19275148 19275190 -9729466 + AT_rich Low_complexity Low_complexity 1 42 0 1 732 2766 180 31 19 chrUextra 19276241 19276927 -9727729 + SAR_DM Satellite Satellite 185 878 -594 1 732 5867 3 1 3 chrUextra 19277027 19277713 -9726943 - LSU-rRNA_Dme rRNA rRNA -2320 1580 896 1 732 46 0 0 0 chrUextra 19279147 19279193 -9725463 + AT_rich Low_complexity Low_complexity 1 46 0 1 732 5952 0 3 1 chrUextra 19279385 19280071 -9724585 - LSU-rRNA_Dme rRNA rRNA -67 3833 3147 1 732 705 12 0 0 chrUextra 19280171 19280253 -9724403 - NTS_DM Other Other -158 82 1 1 732 1710 25 17 17 chrUextra 19280253 19280493 -9724163 - NTS_DM Other Other 0 240 1 1 732 1756 17 17 17 chrUextra 19280493 19280733 -9723923 - NTS_DM Other Other 0 240 1 1 732 746 25 32 32 chrUextra 19280733 19280857 -9723799 - NTS_DM Other Other 0 240 117 1 732 768 104 0 0 chrUextra 19280957 19281082 -9723574 - ARS406_DM Unknown Unknown -228 125 1 1 732 2841 182 8 8 chrUextra 19280989 19281642 -9723014 + SAR_DM Satellite Satellite 195 847 -625 1 732 4683 56 60 13 chrUextra 19281743 19282429 -9722227 - R1_DM LINE R1 -4420 936 219 1 732 5911 6 0 0 chrUextra 19282529 19283215 -9721441 - R1_DM LINE R1 -617 4739 4054 1 732 621 14 0 0 chrUextra 19283315 19283388 -9721268 + R1_DM LINE R1 5284 5356 0 1 732 4284 66 3 3 chrUextra 19283421 19284001 -9720655 + R1_DM LINE R1 1 580 -4776 1 732 5541 13 0 1 chrUextra 19284101 19284787 -9719869 + QUASIMODO_I LTR Gypsy 4572 5256 -804 1 732 1018 71 24 6 chrUextra 19284887 19285057 -9719599 + DMSAT6 Satellite Satellite 298 470 0 1 732 2424 93 30 10 chrUextra 19285074 19285573 -9719083 + DMSAT6 Satellite Satellite 1 509 -3 1 732 2616 0 0 0 chrUextra 19285673 19285973 -9718683 + R2_DM LINE R2 3308 3607 0 1 732 3361 8 0 0 chrUextra 19285970 19286359 -9718297 + LSU-rRNA_Dme rRNA rRNA 2578 2966 -934 1 732 4430 128 0 0 chrUextra 19286459 19287145 -9717511 + HMSBEAGLE_I LTR Gypsy 5080 5765 -764 1 732 803 94 0 0 chrUextra 19287245 19287372 -9717284 - ARS406_DM Unknown Unknown -226 127 1 1 732 2815 175 29 9 chrUextra 19287279 19287930 -9716726 + SAR_DM Satellite Satellite 195 858 -614 1 732 335 283 0 9 chrUextra 19288529 19288636 -9716020 + Copia2_I LTR Copia 567 672 -3490 1 732 2230 144 154 29 chrUextra 19288818 19289491 -9715165 + TART LINE telomeric 9549 10176 -4301 1 732 760 64 96 0 chrUextra 19289603 19289728 -9714928 + ARS406_DM Unknown Unknown 53 189 -164 1 732 2956 176 22 8 chrUextra 19289620 19290289 -9714367 - SAR_DM Satellite Satellite -545 927 249 1 732 5708 18 19 0 chrUextra 19290389 19291075 -9713581 + Gypsy4_I LTR Gypsy 2060 2758 -3530 1 732 3053 165 12 10 chrUextra 19291175 19291861 -9712795 - SAR_DM Satellite Satellite -397 1075 389 1 732 5131 34 3 15 chrUextra 19291961 19292647 -9712009 + BATUMI_I LTR Pao 2652 3329 -4634 1 732 286 282 107 89 chrUextra 19292889 19293169 -9711487 - Invader1_LTR LTR Gypsy -55 368 84 1 732 256 151 0 36 chrUextra 19293378 19293433 -9711223 + DMLTR5 LTR Gypsy 44 96 -170 1 732 5761 1 0 1 chrUextra 19293533 19294197 -9710459 + LSU-rRNA_Dme rRNA rRNA 1970 2632 -1268 1 732 6034 1 0 0 chrUextra 19294319 19295005 -9709651 + R2_DM LINE R2 2905 3590 -17 1 732 306 264 0 0 chrUextra 19295341 19295432 -9709224 - DIVER2_I LTR Pao -1621 2526 2436 1 732 1800 5 0 5 chrUextra 19295891 19296109 -9708547 - DM176_LTR LTR Gypsy -290 217 1 1 732 3759 2 0 0 chrUextra 19296109 19296577 -9708079 - DM176_I LTR Gypsy 0 6420 5953 1 732 5599 20 15 0 chrUextra 19296677 19297363 -9707293 - FW_DM LINE Jockey -1000 3692 2997 1 732 5831 7 0 0 chrUextra 19297463 19298149 -9706507 + R1_DM LINE R1 2955 3640 -1716 1 732 5358 20 0 0 chrUextra 19298249 19298910 -9705746 + FW_DM LINE Jockey 2581 3241 -1451 1 732 5967 0 0 0 chrUextra 19299035 19299721 -9704935 + DMRT1A LINE R1 4047 4732 -451 1 732 938 301 32 27 chrUextra 19299875 19300459 -9704197 + Copia2_I LTR Copia 1392 2116 -2477 1 732 5418 3 1 4 chrUextra 19300607 19301293 -9703363 + MAX_I LTR Pao 373 1056 -6858 1 732 5019 13 99 0 chrUextra 19301393 19302079 -9702577 - STALKER4_I LTR Gypsy -3553 2977 2224 1 732 514 60 128 0 chrUextra 19302191 19302308 -9702348 - PROTOP DNA P -3797 683 552 1 732 2248 21 0 40 chrUextra 19302292 19302595 -9702061 + BATUMI_I LTR Pao 6994 7284 -679 1 732 1562 79 4 32 chrUextra 19302595 19302844 -9701812 + BATUMI_I LTR Pao 1 242 -7721 1 732 416 20 0 0 chrUextra 19302965 19303015 -9701641 - FW_DM LINE Jockey -4642 50 1 1 732 5053 34 0 2 chrUextra 19303023 19303651 -9701005 + R1_DM LINE R1 1377 2003 -3353 1 732 5395 15 45 0 chrUextra 19303751 19304437 -9700219 - R1_DM LINE R1 -4217 1139 423 1 732 34 24 0 0 chrUextra 19305141 19305182 -9699474 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 5763 7 0 0 chrUextra 19305323 19306009 -9698647 + QUASIMODO_I LTR Gypsy 2324 3009 -3051 1 732 2903 179 12 7 chrUextra 19306117 19306794 -9697862 - SAR_DM Satellite Satellite -569 903 224 1 732 4220 44 1 3 chrUextra 19306895 19307581 -9697075 + Gypsy2_I LTR Gypsy 5459 6104 -31 1 732 2403 97 20 32 chrUextra 19307681 19308365 -9696291 - DMSAT6 Satellite Satellite -86 676 1 1 732 5716 1 0 0 chrUextra 19308466 19309151 -9695505 - ROO_I LTR Pao -7005 1251 567 1 732 5218 0 2 2 chrUextra 19309337 19309936 -9694720 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 1 732 2984 132 18 42 chrUextra 19310156 19310709 -9693947 - Gypsy12_LTR LTR Gypsy -23 2313 1774 1 732 2965 184 5 6 chrUextra 19310822 19311495 -9693161 - SAR_DM Satellite Satellite -577 895 224 1 732 442 99 0 0 chrUextra 19311433 19311504 -9693152 + ARS406_DM Unknown Unknown 1 71 -282 1 732 3197 165 9 9 chrUextra 19311609 19312288 -9692368 + SAR_DM Satellite Satellite 369 1047 -425 1 732 2738 178 31 22 chrUextra 19312391 19313073 -9691583 - SAR_DM Satellite Satellite -491 981 294 1 732 3509 2 0 0 chrUextra 19313460 19313861 -9690795 + ROO_LTR LTR Pao 1 401 -27 1 732 370 0 0 0 chrUextra 19313963 19314005 -9690651 + Invader3_LTR LTR Gypsy 257 298 0 1 732 4370 107 6 0 chrUextra 19314005 19314646 -9690010 - Gypsy12_I LTR Gypsy -2541 3005 2361 1 732 5956 1 1 0 chrUextra 19315531 19316216 -9688440 + LSU-rRNA_Dme rRNA rRNA 2084 2769 -1131 1 732 758 11 0 0 chrUextra 19316316 19316404 -9688252 - NTS_DM Other Other -152 88 1 1 732 1716 25 17 17 chrUextra 19316404 19316644 -9688012 - NTS_DM Other Other 0 240 1 1 732 1408 20 20 20 chrUextra 19316644 19316847 -9687809 - NTS_DM Other Other 0 240 38 1 732 817 0 0 0 chrUextra 19316847 19316943 -9687713 - NTS_DM Other Other -107 133 38 1 732 400 17 17 0 chrUextra 19316943 19317001 -9687655 - NTS_DM Other Other -107 133 75 1 732 5879 0 3 3 chrUextra 19317101 19317786 -9686870 + SSU-rRNA_Dme rRNA rRNA 956 1640 -355 1 732 3006 165 8 11 chrUextra 19317888 19318542 -9686114 + SAR_DM Satellite Satellite 425 1076 -396 1 732 280 143 0 18 chrUextra 19318514 19318571 -9686085 - XDMR_DM Unknown Unknown -7 353 298 1 732 5861 1 0 4 chrUextra 19318671 19319356 -9685300 + DOC LINE Jockey 3778 4459 -266 1 732 5774 1 4 4 chrUextra 19319456 19320141 -9684515 - LSU-rRNA_Dme rRNA rRNA -2195 1705 1021 1 732 26 30 0 0 chrUextra 19320294 19320327 -9684329 + AT_rich Low_complexity Low_complexity 1 33 0 1 732 23 68 0 0 chrUextra 19320373 19320417 -9684239 + AT_rich Low_complexity Low_complexity 1 44 0 1 732 1054 284 48 40 chrUextra 19321026 19321709 -9682947 - SAR_DM Satellite Satellite -408 1064 376 1 732 5534 19 3 4 chrUextra 19321811 19322496 -9682160 - Gypsy4_I LTR Gypsy -1490 4798 4115 1 732 1269 24 0 6 chrUextra 19322596 19322761 -9681895 - NTS_DM Other Other -76 164 1 1 732 1756 17 17 17 chrUextra 19322761 19323001 -9681655 - NTS_DM Other Other 0 240 1 1 732 1370 30 20 20 chrUextra 19323001 19323204 -9681452 - NTS_DM Other Other 0 240 38 1 732 620 0 0 0 chrUextra 19323204 19323281 -9681375 - NTS_DM Other Other -107 133 57 1 732 1203 7 0 19 chrUextra 19323381 19323535 -9681121 + NTS_DM Other Other 12 162 -78 1 732 488 119 36 0 chrUextra 19323646 19323730 -9680926 + NTS_DM Other Other 4 90 -150 1 732 28 48 0 0 chrUextra 19324003 19324045 -9680611 + AT_rich Low_complexity Low_complexity 1 42 0 1 732 2985 3 6 0 chrUextra 19324166 19324511 -9680145 + LSU-rRNA_Dme rRNA rRNA 2313 2659 -1241 1 732 2925 3 0 3 chrUextra 19324508 19324851 -9679805 + R1_DM LINE R1 4803 5144 -212 1 732 5954 0 0 0 chrUextra 19325736 19326421 -9678235 - BEL_I LTR Pao -3692 1712 1028 1 732 5614 28 0 0 chrUextra 19326521 19327206 -9677450 - R1_DM LINE R1 -1818 3538 2854 1 732 34 24 0 0 chrUextra 19327473 19327514 -9677142 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 5846 4 1 0 chrUextra 19328096 19328776 -9675880 + STALKER4_I LTR Gypsy 3654 4334 -2196 1 732 3151 170 10 7 chrUextra 19328881 19329558 -9675098 - SAR_DM Satellite Satellite -425 1047 369 1 732 5228 12 34 0 chrUextra 19329661 19330346 -9674310 - STALKER4_I LTR Gypsy -66 6464 5757 1 732 22 0 0 0 chrUextra 19330638 19330660 -9673996 + AT_rich Low_complexity Low_complexity 1 22 0 1 732 5673 0 13 0 chrUextra 19331231 19331904 -9672752 - LSU-rRNA_Dme rRNA rRNA -3001 899 218 1 732 5527 26 1 0 chrUextra 19332016 19332701 -9671955 - NINJA_I LTR Pao -3864 2147 1462 1 732 3015 178 15 21 chrUextra 19332801 19333486 -9671170 + SAR_DM Satellite Satellite 1 680 -314 1 732 4529 30 0 128 chrUextra 19333590 19334271 -9670385 + CIRCE LINE Composite 1085 1678 -4678 1 732 5744 4 1 0 chrUextra 19334371 19335056 -9669600 + QUASIMODO_I LTR Gypsy 5138 5823 -237 1 732 644 176 76 46 chrUextra 19335637 19335834 -9668822 + DMCR1A LINE CR1 4227 4429 -41 1 732 2610 39 0 0 chrUextra 19335941 19336247 -9668409 + R1_DM LINE R1 1538 1843 -3513 1 732 3331 23 0 0 chrUextra 19336241 19336626 -9668030 + R1_DM LINE R1 2087 2471 -2885 1 732 5746 38 9 0 chrUextra 19336726 19337411 -9667245 + R1_DM LINE R1 2487 3177 -2179 1 732 832 0 21 0 chrUextra 19337511 19337607 -9667049 - LSU-rRNA_Dme rRNA rRNA -3802 98 1 1 732 34 24 0 0 chrUextra 19337896 19337937 -9666719 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 23 68 0 0 chrUextra 19338376 19338420 -9666236 + AT_rich Low_complexity Low_complexity 1 44 0 1 732 29 60 0 0 chrUextra 19338466 19338516 -9666140 + AT_rich Low_complexity Low_complexity 1 50 0 1 732 1021 49 8 0 chrUextra 19338858 19338981 -9665675 - PROTOP DNA P 0 4480 4357 1 732 239 0 0 0 chrUextra 19339081 19339107 -9665549 + R1_DM LINE R1 5331 5356 0 1 732 4850 69 19 3 chrUextra 19339140 19339766 -9664890 + R1_DM LINE R1 1 636 -4720 1 732 6077 10 1 1 chrUextra 19340651 19341336 -9663320 - R1_DM LINE R1 -1004 4352 3668 1 732 3394 173 10 7 chrUextra 19341437 19342119 -9662537 - SAR_DM Satellite Satellite -577 895 212 1 732 2288 8 8 11 chrUextra 19342221 19342486 -9662170 + SSU-rRNA_Dme rRNA rRNA 1732 1995 0 1 732 21 89 0 0 chrUextra 19342506 19342562 -9662094 + AT_rich Low_complexity Low_complexity 1 56 0 1 732 3663 5 0 2 chrUextra 19343194 19343597 -9661059 + STALKER4_LTR LTR Gypsy 1 402 0 1 732 354 25 0 0 chrUextra 19343597 19343624 -9661032 + STALKER4_I LTR Gypsy 1 27 -6503 1 732 309 96 0 37 chrUextra 19343624 19343678 -9660978 + Stalker2_I LTR Gypsy 1 52 -7350 1 732 3432 144 4 4 chrUextra 19343791 19344476 -9660180 - BATUMI_I LTR Pao -3236 4678 3918 1 732 2516 94 3 34 chrUextra 19344576 19345260 -9659396 - DMSAT6 Satellite Satellite -84 662 1 1 732 2965 189 11 6 chrUextra 19345402 19346045 -9658611 + SAR_DM Satellite Satellite 377 1022 -450 1 732 22 0 0 0 chrUextra 19346511 19346533 -9658123 + AT_rich Low_complexity Low_complexity 1 22 0 1 732 224 185 31 0 chrUextra 19347041 19347106 -9657550 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 732 3439 172 10 7 chrUextra 19347716 19348400 -9656256 - SAR_DM Satellite Satellite -550 922 237 1 732 6045 6 3 3 chrUextra 19348501 19349186 -9655470 + R1_DM LINE R1 3327 4011 -1345 1 732 5988 20 9 0 chrUextra 19349286 19349971 -9654685 - Copia2_I LTR Copia -1193 2969 2279 1 732 1687 176 50 18 chrUextra 19350071 19350755 -9653901 + SAR_DM Satellite Satellite 1 706 -216 1 732 3063 186 12 12 chrUextra 19351644 19352323 -9652333 - SAR_DM Satellite Satellite -602 870 192 1 732 1602 270 61 12 chrUextra 19352437 19353025 -9651631 + Copia_I LTR Copia 1641 2257 -2336 1 732 1325 39 0 0 chrUextra 19353211 19353366 -9651290 + Invader3_LTR LTR Gypsy 144 298 0 1 732 2831 46 319 8 chrUextra 19353366 19353896 -9650760 + IVK_DM LINE I 1626 2320 -3082 1 732 2716 0 0 0 chrUextra 19353996 19354288 -9650368 + LSU-rRNA_Dme rRNA rRNA 3609 3900 0 1 732 241 163 0 58 chrUextra 19354389 19354441 -9650215 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 1 732 25 0 0 0 chrUextra 19354460 19354485 -9650171 + AT_rich Low_complexity Low_complexity 1 25 0 1 732 268 196 0 19 chrUextra 19354487 19354539 -9650117 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 732 265 150 0 0 chrUextra 19354591 19354631 -9650025 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 732 5847 5 6 11 chrUextra 19354802 19355466 -9649190 + MAX_I LTR Pao 1 661 -7253 1 732 6391 0 0 0 chrUextra 19355566 19356251 -9648405 - DOC LINE Jockey -490 4235 3551 1 732 879 207 29 5 chrUextra 19356356 19356560 -9648096 + TAHRE LINE telomeric 7035 7243 -3220 1 732 2146 171 52 31 chrUextra 19356560 19357036 -9647620 + TART LINE telomeric 9022 9507 -4970 1 732 6282 6 0 0 chrUextra 19357136 19357821 -9646835 - DMRT1A LINE R1 -2710 2473 1789 1 732 6340 3 0 1 chrUextra 19357921 19358606 -9646050 - LSU-rRNA_Dme rRNA rRNA -773 3127 2444 1 732 5959 22 29 0 chrUextra 19358706 19359391 -9645265 + FW_DM LINE Jockey 690 1394 -3298 1 732 1554 19 0 0 chrUextra 19359914 19360175 -9644481 + (TCTTG)n Simple_repeat Simple_repeat 1 261 0 1 732 6290 9 0 0 chrUextra 19361061 19361746 -9642910 + Gypsy6_I LTR Gypsy 2317 3001 -4011 1 732 3456 53 7 140 chrUextra 19361846 19362524 -9642132 - BATUMI_I LTR Pao -7084 879 292 1 732 6215 3 0 0 chrUextra 19362631 19363315 -9641341 + LSU-rRNA_Dme rRNA rRNA 423 1106 -2794 1 732 6262 1 3 3 chrUextra 19363416 19364101 -9640555 - LSU-rRNA_Dme rRNA rRNA -2344 1556 872 1 732 4826 26 2 5 chrUextra 19364311 19364886 -9639770 - CIRCE LINE Composite -1376 4980 4408 1 732 6274 0 0 0 chrUextra 19364988 19365671 -9638985 - BS2 LINE Jockey -1296 3425 2743 1 732 34 24 0 0 chrUextra 19365923 19365964 -9638692 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 1213 7 0 0 chrUextra 19366556 19366693 -9637963 + DM176_I LTR Gypsy 6284 6420 0 1 732 3110 47 57 74 chrUextra 19366693 19367195 -9637461 + DM176_LTR LTR Gypsy 1 480 -27 1 732 396 22 0 0 chrUextra 19367195 19367241 -9637415 + DM176_I LTR Gypsy 1 46 -6374 1 732 4739 45 50 35 chrUextra 19368126 19368811 -9635845 - PROTOP_A DNA P -268 837 143 1 732 6246 0 0 1 chrUextra 19368911 19369596 -9635060 + ROO_I LTR Pao 3612 4295 -3961 1 732 5811 29 1 1 chrUextra 19369696 19370380 -9634276 - R1_DM LINE R1 -1011 4345 3662 1 732 6309 1 1 0 chrUextra 19370481 19371166 -9633490 - BS2 LINE Jockey -774 3947 3262 1 732 23 0 0 0 chrUextra 19371266 19371289 -9633367 + AT_rich Low_complexity Low_complexity 1 23 0 1 732 551 0 124 12 chrUextra 19371289 19371611 -9633045 + (TA)n Simple_repeat Simple_repeat 1 357 0 1 732 2801 9 6 15 chrUextra 19371616 19371950 -9632706 - DM297_LTR LTR Gypsy 0 414 84 1 732 6122 4 1 1 chrUextra 19372051 19372736 -9631920 + R1_DM LINE R1 3464 4148 -1208 1 732 6194 0 0 1 chrUextra 19373621 19374306 -9630350 + ROO_I LTR Pao 4728 5411 -2845 1 732 3535 166 7 6 chrUextra 19374417 19375091 -9629565 - SAR_DM Satellite Satellite -411 1061 387 1 732 6396 0 1 0 chrUextra 19375191 19375876 -9628780 - SSU-rRNA_Dme rRNA rRNA -899 1096 411 1 732 11704 87 14 1 chrUextra 19375976 19377446 -9627210 + R1_DM LINE R1 3484 4972 -384 1 732 3816 180 6 1 chrUextra 19377546 19378219 -9626437 + ROVER-I_DM LTR Gypsy 3603 4278 -2306 1 732 3238 181 7 7 chrUextra 19378331 19379004 -9625652 - SAR_DM Satellite Satellite -602 870 198 1 732 598 128 20 0 chrUextra 19378914 19379016 -9625640 + ARS406_DM Unknown Unknown 1 104 -249 1 732 5399 15 3 54 chrUextra 19379116 19379801 -9624855 + BATUMI_I LTR Pao 2246 2895 -5068 1 732 3099 177 12 15 chrUextra 19379909 19380586 -9624070 - SAR_DM Satellite Satellite -514 958 284 1 732 2679 113 8 3 chrUextra 19380686 19381059 -9623597 + NOMAD_I LTR Gypsy 4502 4876 -1696 1 732 1264 240 16 13 chrUextra 19381053 19381369 -9623287 - BS LINE Jockey -1297 3829 3513 1 732 3271 179 9 9 chrUextra 19381471 19382138 -9622518 + SAR_DM Satellite Satellite 410 1076 -396 1 732 1564 45 10 0 chrUextra 19382256 19382454 -9622202 - BATUMI_I LTR Pao -1337 6626 6427 1 732 3476 60 0 2 chrUextra 19382477 19382941 -9621715 + BATUMI_I LTR Pao 7303 7765 -198 1 732 4890 55 33 22 chrUextra 19383049 19383724 -9620932 + MAX_I LTR Pao 1217 1898 -6016 1 732 6291 6 0 0 chrUextra 19383826 19384511 -9620145 + R2_DM LINE R2 2520 3204 -403 1 732 6330 0 0 0 chrUextra 19384611 19385296 -9619360 - BS2 LINE Jockey -185 4536 3852 1 732 566 16 0 0 chrUextra 19385396 19385458 -9619198 - NTS_DM Other Other -178 62 1 1 732 1866 17 16 29 chrUextra 19385458 19385701 -9618955 - NTS_DM Other Other 0 240 1 1 732 1899 17 17 17 chrUextra 19385701 19385941 -9618715 - NTS_DM Other Other 0 240 1 1 732 935 22 29 29 chrUextra 19385941 19386081 -9618575 - NTS_DM Other Other 0 240 101 1 732 6270 0 1 0 chrUextra 19386181 19386866 -9617790 + R1_DM LINE R1 2180 2865 -2491 1 732 4097 0 0 51 chrUextra 19387165 19387651 -9617005 + LSU-rRNA_Dme rRNA rRNA 1 461 -3439 1 732 2387 198 17 42 chrUextra 19387798 19388340 -9616316 - Gypsy12_LTR LTR Gypsy -1808 528 1 1 732 714 72 0 0 chrUextra 19388339 19388436 -9616220 - Gypsy12_I LTR Gypsy 0 5546 5450 1 732 2894 176 8 9 chrUextra 19388536 19389191 -9615465 - SAR_DM Satellite Satellite -627 845 192 1 732 734 119 0 0 chrUextra 19389095 19389221 -9615435 + ARS406_DM Unknown Unknown 1 126 -227 1 732 705 12 0 0 chrUextra 19389321 19389403 -9615253 - NTS_DM Other Other -158 82 1 1 732 1744 21 17 17 chrUextra 19389403 19389643 -9615013 - NTS_DM Other Other 0 240 1 1 732 1756 17 17 17 chrUextra 19389643 19389883 -9614773 - NTS_DM Other Other 0 240 1 1 732 739 25 32 32 chrUextra 19389883 19390006 -9614650 - NTS_DM Other Other 0 240 118 1 732 5683 13 4 0 chrUextra 19390106 19390791 -9613865 + STALKER4_I LTR Gypsy 1661 2348 -4182 1 732 2670 220 7 6 chrUextra 19390891 19391572 -9613084 - Stalker2_I LTR Gypsy -1506 5896 5215 1 732 2582 19 0 3 chrUextra 19391676 19392001 -9612655 + FW_DM LINE Jockey 4365 4688 -4 1 732 2758 48 3 3 chrUextra 19392002 19392361 -9612295 - R1_DM LINE R1 -3966 1390 1032 1 732 1871 0 0 0 chrUextra 19392461 19392680 -9611976 - HMSBEAGLE_I LTR Gypsy -6310 219 1 1 732 2316 8 0 0 chrUextra 19392679 19392945 -9611711 - DMLTR5 LTR Gypsy 0 266 1 1 732 1634 25 5 0 chrUextra 19392945 19393146 -9611510 - ACCORD2_I LTR Gypsy -6128 1084 883 1 732 2658 189 24 22 chrUextra 19393251 19393931 -9610725 - SAR_DM Satellite Satellite -354 1118 438 1 732 1727 58 0 0 chrUextra 19394036 19394262 -9610394 + PROTOP DNA P 74 299 -4181 1 732 1860 53 104 4 chrUextra 19394249 19394716 -9609940 + PROTOP_A DNA P 522 899 -206 1 732 1926 96 25 0 chrUextra 19394817 19395099 -9609557 - Gypsy_I LTR Gypsy -756 5751 5463 1 732 231 139 0 0 chrUextra 19395100 19395143 -9609513 + G6_DM LINE Jockey 1 43 -1999 1 732 2368 0 32 0 chrUextra 19395601 19395880 -9608776 + G4_DM LINE Jockey 1374 1661 -2195 1 732 609 47 12 0 chrUextra 19395889 19395975 -9608681 + G4_DM LINE Jockey 1894 1980 -1876 1 732 2477 26 3 0 chrUextra 19395973 19396286 -9608370 + G4_DM LINE Jockey 2325 2638 -1218 1 732 5406 24 6 5 chrUextra 19396386 19397055 -9607601 - CIRCE LINE Composite -2717 3639 2970 1 732 5825 6 0 0 chrUextra 19397956 19398641 -9606015 + DOC LINE Jockey 1196 1880 -2845 1 733 3766 0 0 0 chrUextra 19398842 19399270 -9605386 + ROO_LTR LTR Pao 1 428 0 1 733 1369 0 0 0 chrUextra 19399270 19399426 -9605230 + ROO_I LTR Pao 1 156 -8100 1 733 2914 177 18 7 chrUextra 19399527 19400205 -9604451 - SAR_DM Satellite Satellite -593 879 195 1 733 712 92 0 0 chrUextra 19400311 19400420 -9604236 - ARS406_DM Unknown Unknown -244 109 1 1 733 2836 181 9 9 chrUextra 19400327 19400995 -9603661 + SAR_DM Satellite Satellite 195 862 -610 1 733 2839 169 20 13 chrUextra 19401098 19401781 -9602875 - SAR_DM Satellite Satellite -715 687 1 1 733 5697 13 0 0 chrUextra 19401881 19402566 -9602090 - R1_DM LINE R1 -4443 913 229 1 733 4684 0 0 0 chrUextra 19402666 19403215 -9601441 + FW_DM LINE Jockey 2633 3181 -1511 1 733 2193 97 15 24 chrUextra 19403452 19404136 -9600520 - DMSAT6 Satellite Satellite -30 677 1 1 733 5848 3 0 0 chrUextra 19404236 19404921 -9599735 + R1_DM LINE R1 1560 2244 -3112 1 733 5394 16 26 0 chrUextra 19405021 19405706 -9598950 + STALKER4_I LTR Gypsy 2988 3690 -2840 1 733 866 45 0 0 chrUextra 19405806 19405917 -9598739 - PROTOP_B DNA P -969 184 74 1 733 5925 4 0 0 chrUextra 19406591 19407276 -9597380 + R1_DM LINE R1 4089 4773 -583 1 733 3154 170 10 9 chrUextra 19407376 19408060 -9596596 + SAR_DM Satellite Satellite 333 1017 -455 1 733 838 42 8 0 chrUextra 19408161 19408281 -9596375 + G6_DM LINE Jockey 1922 2042 0 1 733 4735 11 0 0 chrUextra 19408284 19408846 -9595810 - S_DM DNA Tc1 -217 1519 958 1 733 5775 1 1 1 chrUextra 19408946 19409631 -9595025 - ROO_I LTR Pao -5905 2351 1667 1 733 416 32 0 16 chrUextra 19409731 19409795 -9594861 + NTS_DM Other Other 139 201 -39 1 733 870 9 0 27 chrUextra 19409847 19409959 -9594697 + NTS_DM Other Other 25 133 -107 1 733 1438 15 20 20 chrUextra 19409959 19410162 -9594494 + NTS_DM Other Other 38 240 0 1 733 1731 21 17 17 chrUextra 19410162 19410402 -9594254 + NTS_DM Other Other 1 240 0 1 733 2822 182 9 9 chrUextra 19411302 19411966 -9592690 - SAR_DM Satellite Satellite -614 858 195 1 733 647 124 0 0 chrUextra 19411873 19411986 -9592670 + ARS406_DM Unknown Unknown 1 113 -240 1 733 5803 1 1 7 chrUextra 19412086 19412771 -9591885 - LSU-rRNA_Dme rRNA rRNA -2423 1477 797 1 733 5342 15 1 39 chrUextra 19412871 19413556 -9591100 + CIRCE LINE Composite 8 666 -5690 1 733 5827 12 0 0 chrUextra 19413656 19414341 -9590315 - Gypsy4_I LTR Gypsy -4751 1537 853 1 733 2907 181 12 9 chrUextra 19414441 19415126 -9589530 + SAR_DM Satellite Satellite 297 983 -489 1 733 5428 19 0 0 chrUextra 19415226 19415911 -9588745 - IDEFIX_I LTR Gypsy -1370 4258 3574 1 733 1299 153 122 160 chrUextra 19416034 19416696 -9587960 + MAX_I LTR Pao 557 1193 -6721 1 733 2003 209 107 34 chrUextra 19416796 19417481 -9587175 - TAHRE LINE telomeric -469 9994 9260 1 733 4906 62 4 10 chrUextra 19417581 19418266 -9586390 + BATUMI_I LTR Pao 3032 3712 -4251 1 733 3909 9 0 0 chrUextra 19418366 19418821 -9585835 - DMRT1B LINE R1 -4728 455 1 1 733 2651 0 0 0 chrUextra 19419151 19419455 -9585201 + LSU-rRNA_Dme rRNA rRNA 3597 3900 0 1 733 22 56 0 0 chrUextra 19419527 19419563 -9585093 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 246 150 0 0 chrUextra 19419568 19419608 -9585048 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 246 150 0 0 chrUextra 19419660 19419700 -9584956 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 2635 190 19 25 chrUextra 19419936 19420621 -9584035 + SAR_DM Satellite Satellite 1 681 -208 1 733 4710 99 3 1 chrUextra 19420721 19421406 -9583250 - Gypsy12_I LTR Gypsy -2409 3137 2452 1 733 2870 172 12 14 chrUextra 19421507 19422163 -9582493 - SAR_DM Satellite Satellite -486 986 332 1 733 1568 0 0 0 chrUextra 19422291 19422469 -9582187 + LSU-rRNA_Dme rRNA rRNA 3723 3900 0 1 733 22 56 0 0 chrUextra 19422541 19422577 -9582079 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 246 150 0 0 chrUextra 19422582 19422622 -9582034 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 246 150 0 0 chrUextra 19422674 19422714 -9581942 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 246 150 0 0 chrUextra 19422766 19422806 -9581850 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 255 125 0 0 chrUextra 19422849 19422889 -9581767 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 22 56 0 0 chrUextra 19422902 19422938 -9581718 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 497 0 53 40 chrUextra 19423077 19423153 -9581503 + NTS_DM Other Other 164 240 0 1 733 1718 17 17 21 chrUextra 19423153 19423394 -9581262 + NTS_DM Other Other 1 240 0 1 733 1836 8 17 13 chrUextra 19423394 19423633 -9581023 + NTS_DM Other Other 1 240 0 1 733 1089 8 0 0 chrUextra 19423633 19423761 -9580895 + NTS_DM Other Other 1 128 -112 1 733 4851 64 1 18 chrUextra 19423861 19424546 -9580110 - R1_DM LINE R1 -4568 788 115 1 733 5884 6 0 0 chrUextra 19424646 19425331 -9579325 + R1_DM LINE R1 1826 2510 -2846 1 733 5723 13 1 0 chrUextra 19425431 19426116 -9578540 - R1_DM LINE R1 -2330 3026 2341 1 733 5660 23 0 0 chrUextra 19426216 19426901 -9577755 + R1_DM LINE R1 3040 3724 -1632 1 733 5921 1 0 0 chrUextra 19427001 19427686 -9576970 + R1_DM LINE R1 1762 2446 -2910 1 733 4931 48 9 25 chrUextra 19427786 19428471 -9576185 + TART LINE telomeric 3053 3726 -10751 1 733 1775 13 17 21 chrUextra 19428574 19428815 -9575841 - NTS_DM Other Other 0 240 1 1 733 1408 20 20 20 chrUextra 19428815 19429018 -9575638 - NTS_DM Other Other 0 240 38 1 733 817 0 0 0 chrUextra 19429018 19429114 -9575542 - NTS_DM Other Other -107 133 38 1 733 832 9 9 27 chrUextra 19429114 19429225 -9575431 - NTS_DM Other Other -107 133 25 1 733 5609 13 1 4 chrUextra 19429356 19430041 -9574615 + R1_DM LINE R1 3551 4233 -1123 1 733 2906 185 7 7 chrUextra 19430145 19430825 -9573831 + SAR_DM Satellite Satellite 192 871 -601 1 733 913 23 0 8 chrUextra 19430926 19431057 -9573599 + NTS_DM Other Other 72 201 -39 1 733 870 9 0 27 chrUextra 19431109 19431221 -9573435 + NTS_DM Other Other 25 133 -107 1 733 1252 18 0 6 chrUextra 19431221 19431386 -9573270 + NTS_DM Other Other 38 201 -39 1 733 21 57 0 0 chrUextra 19431386 19431421 -9573235 + AT_rich Low_complexity Low_complexity 1 35 0 1 733 832 9 9 27 chrUextra 19431447 19431558 -9573098 + NTS_DM Other Other 25 133 -107 1 733 432 0 19 0 chrUextra 19431558 19431611 -9573045 + NTS_DM Other Other 38 91 -149 1 733 5698 4 0 0 chrUextra 19431711 19432396 -9572260 + Invader2_I LTR Gypsy 2098 2782 -1810 1 733 4679 41 4 9 chrUextra 19432496 19433181 -9571475 - PROTOP DNA P -3698 782 163 1 733 5881 4 0 0 chrUextra 19433281 19433965 -9570691 + R1_DM LINE R1 4492 5175 -181 1 733 5678 7 0 1 chrUextra 19434065 19434749 -9569907 + G6_DM LINE Jockey 142 824 -1218 1 733 5765 0 0 1 chrUextra 19434849 19435533 -9569123 - LSU-rRNA_Dme rRNA rRNA -2983 917 235 1 733 1827 0 0 0 chrUextra 19435633 19435840 -9568816 + SSU-rRNA_Dme rRNA rRNA 1789 1995 0 1 733 21 89 0 0 chrUextra 19435859 19435915 -9568741 + AT_rich Low_complexity Low_complexity 1 56 0 1 733 5597 26 0 1 chrUextra 19436417 19437101 -9567555 + MAX_I LTR Pao 6631 7313 -601 1 733 258 32 0 0 chrUextra 19437489 19437520 -9567136 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 1 733 5692 12 3 1 chrUextra 19437985 19438669 -9565987 + Invader1_I LTR Gypsy 2404 3088 -98 1 733 21 89 0 0 chrUextra 19439093 19439149 -9565507 + AT_rich Low_complexity Low_complexity 1 56 0 1 733 2383 3 3 7 chrUextra 19439168 19439453 -9565203 - SSU-rRNA_Dme rRNA rRNA 0 1995 1712 1 733 3463 42 48 2 chrUextra 19439553 19440034 -9564622 + PROTOP_A DNA P 603 1105 0 1 733 2216 15 4 11 chrUextra 19440337 19440612 -9564044 + BATUMI_I LTR Pao 6729 7001 -962 1 733 3193 61 7 7 chrUextra 19440572 19441021 -9563635 - BATUMI_I LTR Pao -1543 6420 6038 1 733 5376 32 9 0 chrUextra 19441121 19441805 -9562851 + MDG1_I LTR Gypsy 2682 3371 -3225 1 733 5289 34 35 0 chrUextra 19441905 19442589 -9562067 - DMCR1A LINE CR1 -125 4345 3638 1 733 5173 57 1 4 chrUextra 19442689 19443373 -9561283 + BATUMI_I LTR Pao 3517 4198 -3765 1 733 250 33 0 0 chrUextra 19443485 19443515 -9561141 - Baggins1 LINE LOA -697 4756 4727 1 733 27 29 0 0 chrUextra 19443754 19443788 -9560868 + AT_rich Low_complexity Low_complexity 1 34 0 1 733 378 22 0 0 chrUextra 19444111 19444156 -9560500 + Baggins1 LINE LOA 5346 5390 -63 1 733 2978 159 37 11 chrUextra 19444257 19444912 -9559744 + SAR_DM Satellite Satellite 390 1061 -411 1 733 859 32 0 75 chrUextra 19445062 19445196 -9559460 - DM176_LTR LTR Gypsy -383 124 1 1 733 4060 30 0 2 chrUextra 19445197 19445725 -9558931 - IDEFIX_I LTR Gypsy -971 4657 4131 1 733 487 16 32 0 chrUextra 19445825 19445887 -9558769 + MICROPIA_I LTR Gypsy 200 263 -4213 1 733 5346 11 0 0 chrUextra 19445885 19446509 -9558147 + MICROPIA_I LTR Gypsy 406 1029 -3447 1 733 852 120 7 14 chrUextra 19446623 19446896 -9557760 - RSP Satellite Satellite -6 271 1 1 733 836 82 0 14 chrUextra 19446935 19447216 -9557440 - RSP Satellite Satellite 0 277 1 1 733 1286 291 22 17 chrUextra 19448970 19449571 -9555085 + MICROPIA_I LTR Gypsy 2398 2970 -1506 1 733 326 345 14 24 chrUextra 19450090 19450404 -9554252 + Gypsy3_I LTR Gypsy 1219 1784 -5228 1 733 2648 185 15 23 chrUextra 19450529 19451213 -9553443 + SAR_DM Satellite Satellite 1 678 -396 1 733 667 72 10 0 chrUextra 19451313 19451410 -9553246 - R1_DM LINE R1 -5258 98 1 1 733 4255 25 6 0 chrUextra 19451443 19451964 -9552692 - R1_DM LINE R1 0 5356 4833 1 733 303 0 0 0 chrUextra 19451962 19451997 -9552659 - R1_DM LINE R1 -1697 3659 3625 1 733 5903 1 0 0 chrUextra 19452097 19452781 -9551875 + TAHRE LINE telomeric 9416 10099 -364 1 733 2346 106 19 50 chrUextra 19452881 19453565 -9551091 - DMSAT6 Satellite Satellite -73 663 1 1 733 5488 6 3 1 chrUextra 19453665 19454348 -9550308 + Invader2_I LTR Gypsy 1398 2081 -2511 1 733 5313 34 29 1 chrUextra 19454449 19455133 -9549523 + DMCR1A LINE CR1 3034 3736 -734 1 733 5562 9 1 0 chrUextra 19455233 19455917 -9548739 + DM297_I LTR Gypsy 1236 1920 -4247 1 733 3225 139 15 32 chrUextra 19456024 19456701 -9547955 + SAR_DM Satellite Satellite 369 1033 -439 1 733 4598 18 2 2 chrUextra 19456801 19457360 -9547296 + R1_DM LINE R1 3724 4282 -1074 1 733 891 19 0 0 chrUextra 19457380 19457485 -9547171 + R1_DM LINE R1 4407 4511 -845 1 733 4578 24 0 0 chrUextra 19458371 19458924 -9545732 - R1_DM LINE R1 -2803 2553 2001 1 733 753 86 94 0 chrUextra 19458936 19459053 -9545603 - R1_DM LINE R1 -3739 1617 1490 1 733 1974 9 0 0 chrUextra 19459181 19459413 -9545243 - MICROPIA_LTR LTR Gypsy -244 232 1 1 733 3423 16 0 2 chrUextra 19459413 19459837 -9544819 - MICROPIA_I LTR Gypsy 0 4476 4054 1 733 2995 161 57 27 chrUextra 19459959 19460621 -9544035 - TART LINE telomeric -10480 3997 3387 1 733 1837 33 12 4 chrUextra 19460721 19460965 -9543691 - IDEFIX_LTR LTR Gypsy -348 246 1 1 733 1380 98 34 11 chrUextra 19460965 19461267 -9543389 + Invader2_I LTR Gypsy 3419 3793 -799 1 733 856 77 8 1 chrUextra 19461271 19461403 -9543253 + Invader2_I LTR Gypsy 3861 3983 -609 1 733 208 273 47 8 chrUextra 19461721 19461850 -9542806 + T-rich Low_complexity Low_complexity 2 135 0 1 733 30 0 0 0 chrUextra 19461892 19461922 -9542734 + AT_rich Low_complexity Low_complexity 1 30 0 1 733 785 206 0 0 chrUextra 19462014 19462189 -9542467 - DM297_I LTR Gypsy -1864 4303 4129 1 733 2560 173 13 16 chrUextra 19462291 19462973 -9541683 + BATUMI_I LTR Pao 4203 4882 -3032 1 733 5715 16 1 4 chrUextra 19463073 19463757 -9540899 - BATUMI_I LTR Pao -2193 5770 5089 1 733 201 121 0 0 chrUextra 19463986 19464019 -9540637 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 733 1505 178 21 6 chrUextra 19464644 19465306 -9539350 - SAR_DM Satellite Satellite -619 672 1 1 733 5626 23 0 0 chrUextra 19465425 19466109 -9538547 + R1_DM LINE R1 1550 2233 -3123 1 733 2583 29 0 0 chrUextra 19466209 19466524 -9538132 + R1_DM LINE R1 4519 4833 -523 1 733 3022 14 14 0 chrUextra 19466524 19466891 -9537765 - Stalker3_LTR LTR Gypsy 0 372 1 1 733 2598 196 15 13 chrUextra 19467003 19467677 -9536979 - SAR_DM Satellite Satellite -464 1008 334 1 733 1454 124 57 3 chrUextra 19468099 19468381 -9536275 + DNAREP1_DM LINE Penelope 1 297 -297 1 733 610 27 0 0 chrUextra 19468561 19468636 -9536020 - CIRCE LINE Composite -854 5502 5428 1 733 3328 29 4 43 chrUextra 19468723 19469188 -9535468 - CIRCE LINE Composite -929 5427 4981 1 733 5551 0 3 3 chrUextra 19469345 19470029 -9534627 + DM412 LTR Gypsy 818 1501 -5396 1 733 2381 97 35 19 chrUextra 19470129 19470813 -9533843 + DMSAT6 Satellite Satellite 1 695 -256 1 733 5701 12 4 1 chrUextra 19470913 19471596 -9533060 + R1_DM LINE R1 1821 2505 -2851 1 733 453 19 0 0 chrUextra 19471705 19471759 -9532897 + (TTCTC)n Simple_repeat Simple_repeat 4 57 0 1 733 1538 23 0 4 chrUextra 19475255 19475517 -9529139 + (GAAAA)n Simple_repeat Simple_repeat 1 260 0 1 733 393 236 0 0 chrUextra 19477188 19477315 -9527341 + (CAAA)n Simple_repeat Simple_repeat 4 130 0 1 733 4760 65 12 9 chrUextra 19477970 19478653 -9526003 + Gypsy3_I LTR Gypsy 4650 5938 -1074 1 733 236 16 0 125 chrUextra 19479365 19479437 -9525219 + (TAAAAA)n Simple_repeat Simple_repeat 2 64 0 1 733 5800 4 0 0 chrUextra 19479537 19480221 -9524435 - ROO_I LTR Pao -6628 1628 945 1 733 5890 3 0 0 chrUextra 19480321 19481005 -9523651 + R1_DM LINE R1 2699 3382 -1974 1 733 5697 3 13 0 chrUextra 19481107 19481789 -9522867 + DM176_I LTR Gypsy 4673 5363 -1057 1 733 4372 2 0 0 chrUextra 19481889 19482398 -9522258 + FW_DM LINE Jockey 4184 4692 0 1 733 884 59 3 17 chrUextra 19482715 19483357 -9521299 + RSP Satellite Satellite 1 633 0 1 733 569 34 0 11 chrUextra 19483458 19483548 -9521108 + NTS_DM Other Other 113 201 -39 1 733 870 9 0 27 chrUextra 19483600 19483712 -9520944 + NTS_DM Other Other 25 133 -107 1 733 1222 18 0 12 chrUextra 19483712 19483878 -9520778 + NTS_DM Other Other 38 201 -39 1 733 21 57 0 0 chrUextra 19483878 19483913 -9520743 + AT_rich Low_complexity Low_complexity 1 35 0 1 733 832 9 9 27 chrUextra 19483939 19484050 -9520606 + NTS_DM Other Other 25 133 -107 1 733 756 11 0 0 chrUextra 19484050 19484141 -9520515 + NTS_DM Other Other 38 128 -112 1 733 1238 36 0 18 chrUextra 19484241 19484412 -9520244 - NTS_DM Other Other -72 168 1 1 733 1438 15 20 20 chrUextra 19484412 19484615 -9520041 - NTS_DM Other Other 0 240 38 1 733 850 18 0 27 chrUextra 19484615 19484727 -9519929 - NTS_DM Other Other -107 133 25 1 733 1042 21 0 7 chrUextra 19484779 19484925 -9519731 - NTS_DM Other Other -39 201 57 1 733 22 56 0 0 chrUextra 19485073 19485109 -9519547 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 255 125 0 0 chrUextra 19485122 19485162 -9519494 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 246 150 0 0 chrUextra 19485205 19485245 -9519411 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 246 150 0 0 chrUextra 19485297 19485337 -9519319 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 22 56 0 0 chrUextra 19485342 19485378 -9519278 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 2256 0 0 0 chrUextra 19485450 19485709 -9518947 - LSU-rRNA_Dme rRNA rRNA 0 3900 3642 1 733 2384 97 16 13 chrUextra 19485809 19486489 -9518167 + DMSAT6 Satellite Satellite 1 681 -69 1 733 360 86 17 0 chrUextra 19486593 19486651 -9518005 - ARS406_DM Unknown Unknown -294 59 1 1 733 2868 173 42 9 chrUextra 19486602 19487277 -9517379 + SAR_DM Satellite Satellite 237 933 -539 1 733 920 71 7 20 chrUextra 19487377 19488061 -9516595 - RSP Satellite Satellite -83 675 1 1 733 920 74 4 19 chrUextra 19488163 19488828 -9515828 + RSP Satellite Satellite 1 655 0 1 733 720 90 0 0 chrUextra 19488945 19489056 -9515600 - ARS406_DM Unknown Unknown -242 111 1 1 733 2895 179 9 11 chrUextra 19488960 19489628 -9515028 + SAR_DM Satellite Satellite 192 858 -614 1 733 3118 171 9 7 chrUextra 19489741 19490413 -9514243 - SAR_DM Satellite Satellite -416 1056 384 1 733 2969 173 13 12 chrUextra 19490519 19491197 -9513459 + SAR_DM Satellite Satellite 195 873 -599 1 733 333 62 0 0 chrUextra 19491855 19491903 -9512753 + (CCA)n Simple_repeat Simple_repeat 1 48 0 1 733 345 0 0 0 chrUextra 19492081 19492120 -9512536 - NTS_DM Other Other -164 76 38 1 733 832 9 9 27 chrUextra 19492120 19492231 -9512425 - NTS_DM Other Other -107 133 25 1 733 21 57 0 0 chrUextra 19492257 19492292 -9512364 + AT_rich Low_complexity Low_complexity 1 35 0 1 733 1241 24 0 6 chrUextra 19492292 19492457 -9512199 - NTS_DM Other Other -39 201 38 1 733 870 9 0 27 chrUextra 19492457 19492569 -9512087 - NTS_DM Other Other -107 133 25 1 733 1019 21 0 7 chrUextra 19492621 19492765 -9511891 - NTS_DM Other Other -39 201 59 1 733 246 150 0 0 chrUextra 19492933 19492973 -9511683 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 22 56 0 0 chrUextra 19493071 19493107 -9511549 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 3224 3 0 0 chrUextra 19493179 19493549 -9511107 - LSU-rRNA_Dme rRNA rRNA 0 3900 3531 1 733 362 0 0 0 chrUextra 19493649 19493690 -9510966 - NTS_DM Other Other -162 78 38 1 733 852 18 0 27 chrUextra 19493690 19493802 -9510854 - NTS_DM Other Other -107 133 25 1 733 1252 18 0 6 chrUextra 19493854 19494019 -9510637 - NTS_DM Other Other -39 201 38 1 733 870 9 0 27 chrUextra 19494019 19494131 -9510525 - NTS_DM Other Other -107 133 25 1 733 1063 20 7 7 chrUextra 19494183 19494333 -9510323 - NTS_DM Other Other -39 201 52 1 733 5705 19 0 1 chrUextra 19494433 19495117 -9509539 - MAX_I LTR Pao -4228 3686 3004 1 733 5616 23 0 0 chrUextra 19495217 19495901 -9508755 + FW_DM LINE Jockey 2388 3071 -1621 1 733 3923 92 81 27 chrUextra 19496018 19496685 -9507971 - Gypsy12_I LTR Gypsy -4495 1051 349 1 733 832 9 9 27 chrUextra 19496828 19496939 -9507717 + NTS_DM Other Other 25 133 -107 1 733 787 0 0 10 chrUextra 19496939 19497036 -9507620 + NTS_DM Other Other 38 133 -107 1 733 1408 20 20 20 chrUextra 19497036 19497239 -9507417 + NTS_DM Other Other 38 240 0 1 733 1657 18 18 18 chrUextra 19497239 19497468 -9507188 + NTS_DM Other Other 1 229 -11 1 733 2664 188 9 22 chrUextra 19497569 19498253 -9506403 - SAR_DM Satellite Satellite -356 1116 442 1 733 3116 164 9 10 chrUextra 19498353 19499035 -9505621 + SAR_DM Satellite Satellite 376 1056 -416 1 733 683 106 49 0 chrUextra 19499142 19499265 -9505391 + SAR_DM Satellite Satellite 326 454 -1018 1 733 452 127 14 31 chrUextra 19499301 19499454 -9505202 + FB4_DM DNA Tc1 2941 3070 -1019 1 733 565 142 9 0 chrUextra 19499363 19499476 -9505180 - FB4_DM DNA Tc1 -3376 713 600 1 733 854 167 31 0 chrUextra 19499474 19499666 -9504990 + SAR_DM Satellite Satellite 585 782 -690 1 733 694 154 29 0 chrUextra 19499678 19499814 -9504842 + SAR_DM Satellite Satellite 533 672 -800 1 733 607 26 0 0 chrUextra 19499923 19500000 -9504656 + ARS406_DM Unknown Unknown 83 159 -194 1 733 3560 271 47 24 chrUextra 19500016 19501364 -9503292 - SAR_DM Satellite Satellite -291 1378 1 1 733 938 104 0 0 chrUextra 19501245 19501389 -9503267 + ARS406_DM Unknown Unknown 1 144 -209 1 733 2923 175 9 22 chrUextra 19501489 19502156 -9502500 + SAR_DM Satellite Satellite 462 1119 -353 1 733 406 188 0 19 chrUextra 19502070 19502173 -9502483 - XDMR_DM Unknown Unknown 0 360 260 1 733 239 125 0 24 chrUextra 19502326 19502367 -9502289 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 22 56 0 0 chrUextra 19502380 19502416 -9502240 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 907 9 0 27 chrUextra 19502442 19502554 -9502102 + NTS_DM Other Other 25 133 -107 1 733 1304 18 0 6 chrUextra 19502554 19502719 -9501937 + NTS_DM Other Other 38 201 -39 1 733 907 9 0 27 chrUextra 19502771 19502883 -9501773 + NTS_DM Other Other 25 133 -107 1 733 580 27 0 14 chrUextra 19502883 19502957 -9501699 + NTS_DM Other Other 38 110 -130 1 733 8127 210 53 78 chrUextra 19503057 19505152 -9499504 - LSU-rRNA_Dme rRNA rRNA -1857 2043 1 1 733 21 95 0 0 chrUextra 19505164 19505227 -9499429 + AT_rich Low_complexity Low_complexity 1 63 0 1 733 1041 95 0 0 chrUextra 19505411 19505889 -9498767 + (CAAGA)n Simple_repeat Simple_repeat 1 478 0 1 733 1056 96 0 0 chrUextra 19505896 19506073 -9498583 + (ACTAG)n Simple_repeat Simple_repeat 1 177 0 1 733 2434 103 18 24 chrUextra 19506193 19506848 -9497808 - DMSAT6 Satellite Satellite -25 651 1 1 733 6122 0 1 4 chrUextra 19506977 19507661 -9496995 - SSU-rRNA_Dme rRNA rRNA -371 1624 943 1 733 6125 3 1 0 chrUextra 19507761 19508445 -9496211 + DOC LINE Jockey 3994 4678 -47 1 733 2651 179 9 9 chrUextra 19508545 19509210 -9495446 - SAR_DM Satellite Satellite -436 665 1 1 733 721 107 0 9 chrUextra 19509116 19509229 -9495427 + ARS406_DM Unknown Unknown 1 112 -241 1 733 5957 1 0 1 chrUextra 19509329 19510013 -9494643 - ROO_I LTR Pao -4316 3940 3258 1 733 2956 174 31 21 chrUextra 19510114 19510793 -9493863 - SAR_DM Satellite Satellite -569 903 218 1 733 342 320 16 29 chrUextra 19510964 19511189 -9493467 - BLASTOPIA_I LTR Gypsy -1061 3925 3541 1 733 989 87 6 16 chrUextra 19511681 19512365 -9492291 + RSP Satellite Satellite 1 677 0 1 733 3048 173 10 15 chrUextra 19512465 19513147 -9491509 - SAR_DM Satellite Satellite -501 971 293 1 733 2677 198 36 18 chrUextra 19513249 19513917 -9490739 + SAR_DM Satellite Satellite 440 1119 -353 1 733 375 220 0 10 chrUextra 19513832 19513933 -9490723 - XDMR_DM Unknown Unknown 0 360 261 1 733 1277 164 24 17 chrUextra 19514818 19514851 -9489805 + SAR_DM Satellite Satellite 1 60 -1485 1 733 1087 83 0 0 chrUextra 19514851 19515008 -9489648 - ARS406_DM Unknown Unknown -166 187 31 1 733 1277 164 24 17 chrUextra 19515008 19515069 -9489587 + SAR_DM Satellite Satellite 61 172 -1373 1 733 1180 63 0 0 chrUextra 19515069 19515228 -9489428 - ARS406_DM Unknown Unknown -164 189 31 1 733 1277 164 24 17 chrUextra 19515228 19515501 -9489155 + SAR_DM Satellite Satellite 173 687 -858 1 733 3052 185 7 18 chrUextra 19515602 19516285 -9488371 - SAR_DM Satellite Satellite -365 1107 432 1 733 3710 257 20 42 chrUextra 19516385 19517844 -9486812 + SAR_DM Satellite Satellite 1 1425 -216 1 733 431 85 0 0 chrUextra 19517794 19517853 -9486803 - ARS406_DM Unknown Unknown -164 189 131 1 733 6173 0 6 0 chrUextra 19517955 19518637 -9486019 - LSU-rRNA_Dme rRNA rRNA -221 3679 2994 1 733 1220 7 0 20 chrUextra 19518737 19518888 -9485768 + NTS_DM Other Other 15 162 -78 1 733 514 119 36 0 chrUextra 19518999 19519083 -9485573 + NTS_DM Other Other 4 90 -150 1 733 28 48 0 0 chrUextra 19519356 19519398 -9485258 + AT_rich Low_complexity Low_complexity 1 42 0 1 733 3347 164 9 9 chrUextra 19519527 19520204 -9484452 - SAR_DM Satellite Satellite -425 1047 371 1 733 3174 179 13 7 chrUextra 19520305 19520988 -9483668 - SAR_DM Satellite Satellite -549 923 237 1 733 5731 7 13 9 chrUextra 19521089 19521773 -9482883 - MDG1_I LTR Gypsy -5661 935 249 1 733 773 19 0 0 chrUextra 19521873 19521977 -9482679 + G2_DM LINE Jockey 2998 3101 -1 1 733 21 95 0 0 chrUextra 19522174 19522237 -9482419 + AT_rich Low_complexity Low_complexity 1 63 0 1 733 2395 0 0 81 chrUextra 19522249 19522557 -9482099 + LSU-rRNA_Dme rRNA rRNA 1 283 -3617 1 733 301 102 20 0 chrUextra 19522657 19522706 -9481950 + ARS406_DM Unknown Unknown 140 189 -164 1 733 2956 165 12 4 chrUextra 19522663 19523328 -9481328 - SAR_DM Satellite Satellite -614 669 1 1 733 335 192 13 0 chrUextra 19523263 19523341 -9481315 + XDMR Unknown Unknown 282 360 -1 1 733 3288 164 13 13 chrUextra 19523441 19524125 -9480531 + SAR_DM Satellite Satellite 334 1017 -455 1 733 5619 27 12 6 chrUextra 19524227 19524909 -9479747 - NINJA_I LTR Pao -2790 3221 2536 1 733 1382 6 0 0 chrUextra 19525009 19525169 -9479487 - STALKER4_LTR LTR Gypsy -242 160 1 1 733 4121 17 4 0 chrUextra 19525169 19525693 -9478963 - STALKER4_I LTR Gypsy 0 6530 6005 1 733 2618 193 12 26 chrUextra 19525794 19526453 -9478203 + SAR_DM Satellite Satellite 469 1118 -354 1 733 382 215 0 18 chrUextra 19526367 19526476 -9478180 - XDMR_DM Unknown Unknown 0 360 254 1 733 1023 8 8 0 chrUextra 19526577 19526694 -9477962 - PROTOP_A DNA P -987 118 1 1 733 4537 26 0 2 chrUextra 19526694 19527238 -9477418 + NINJA_I LTR Pao 5469 6011 0 1 733 2705 187 42 17 chrUextra 19527362 19528045 -9476611 - SAR_DM Satellite Satellite -587 700 1 1 733 5626 12 48 12 chrUextra 19528147 19528829 -9475827 + FW_DM LINE Jockey 1706 2412 -2280 1 733 6092 0 0 3 chrUextra 19528929 19529613 -9475043 - ROO_I LTR Pao -5540 2716 2035 1 91 6218 1 0 0 chrUextra 19529713 19530397 -9474259 - ROO_I LTR Pao -620 7636 6953 1 734 5758 13 0 0 chrUextra 19530497 19531181 -9473475 + IDEFIX_I LTR Gypsy 4254 4937 -691 1 734 1537 235 16 16 chrUextra 19531281 19531820 -9472836 - Jockey2 LINE Jockey -1792 1636 1419 1 734 6170 0 0 1 chrUextra 19532065 19532749 -9471907 - DOC LINE Jockey -954 3771 3089 1 734 5588 22 0 4 chrUextra 19532849 19533533 -9471123 - CIRCE LINE Composite -1426 4930 4250 1 734 3108 182 9 9 chrUextra 19533634 19534317 -9470339 - SAR_DM Satellite Satellite -587 885 203 1 734 2338 159 26 16 chrUextra 19534417 19534454 -9470202 + SAR_DM Satellite Satellite 1 48 -1497 1 734 1180 63 0 0 chrUextra 19534454 19534613 -9470043 - ARS406_DM Unknown Unknown -164 189 31 1 734 2338 159 26 16 chrUextra 19534613 19535098 -9469558 + SAR_DM Satellite Satellite 49 687 -858 1 734 3000 172 9 26 chrUextra 19535202 19535883 -9468773 + SAR_DM Satellite Satellite 422 1090 -382 1 734 3417 228 57 39 chrUextra 19535990 19537453 -9467203 + SAR_DM Satellite Satellite 1 1489 -225 1 734 3062 182 9 9 chrUextra 19537562 19538237 -9466419 + SAR_DM Satellite Satellite 195 869 -603 1 734 2908 182 15 25 chrUextra 19538339 19539021 -9465635 - SAR_DM Satellite Satellite -352 1120 446 1 734 2975 179 28 16 chrUextra 19539131 19539805 -9464851 - SAR_DM Satellite Satellite -371 1101 420 1 734 866 10 10 0 chrUextra 19539905 19540004 -9464652 - PROTOP_A DNA P -1005 100 1 1 734 264 304 63 20 chrUextra 19540009 19540264 -9464392 + Gypsy5_I LTR Gypsy 4759 5024 -1485 1 734 6081 6 0 1 chrUextra 19542257 19542941 -9461715 + R1_DM LINE R1 4672 5354 -2 1 734 30 45 0 0 chrUextra 19543156 19543200 -9461456 + AT_rich Low_complexity Low_complexity 1 44 0 1 734 5295 12 3 67 chrUextra 19543825 19544509 -9460147 - LSU-rRNA_Dme rRNA rRNA -1660 2240 1601 1 734 1122 0 8 0 chrUextra 19544611 19544737 -9459919 - SSU-rRNA_Dme rRNA rRNA -1868 127 1 1 734 32 0 0 0 chrUextra 19544869 19544901 -9459755 + AT_rich Low_complexity Low_complexity 1 32 0 1 734 28 48 0 0 chrUextra 19545230 19545272 -9459384 + AT_rich Low_complexity Low_complexity 1 42 0 1 734 2377 184 27 6 chrUextra 19545393 19546073 -9458583 - SAR_DM Satellite Satellite -711 694 1 1 734 3129 180 9 10 chrUextra 19546177 19546852 -9457804 + SAR_DM Satellite Satellite 403 1076 -396 1 734 3392 0 3 3 chrUextra 19546961 19547336 -9457320 + SSU-rRNA_Dme rRNA rRNA 1621 1995 0 1 734 21 89 0 0 chrUextra 19547355 19547411 -9457245 + AT_rich Low_complexity Low_complexity 1 56 0 1 734 3601 33 7 0 chrUextra 19547769 19548195 -9456461 - DIVER2_I LTR Pao 0 4147 3719 1 734 1751 38 0 89 chrUextra 19548172 19548429 -9456227 - DIVER2_I LTR Pao -2572 1575 1342 1 734 5038 2 2 0 chrUextra 19548529 19549081 -9455575 + SSU-rRNA_Dme rRNA rRNA 1443 1995 0 1 734 21 89 0 0 chrUextra 19549597 19549653 -9455003 + AT_rich Low_complexity Low_complexity 1 56 0 1 734 2931 0 3 3 chrUextra 19549672 19549997 -9454659 - SSU-rRNA_Dme rRNA rRNA 0 1995 1671 1 734 842 0 0 0 chrUextra 19550098 19550190 -9454466 + R1_DM LINE R1 5265 5356 0 1 734 5387 2 0 2 chrUextra 19550188 19550781 -9453875 + LSU-rRNA_Dme rRNA rRNA 2640 3231 -669 1 734 5709 13 56 0 chrUextra 19550881 19551565 -9453091 + QUASIMODO_I LTR Gypsy 2648 3369 -2691 1 734 5783 35 0 4 chrUextra 19551668 19552349 -9452307 - BATUMI_I LTR Pao -1924 6039 5362 1 734 4357 34 205 0 chrUextra 19553233 19553861 -9450795 + PROTOP DNA P 655 1411 -3069 1 734 397 68 0 0 chrUextra 19553858 19553917 -9450739 + PROTOP_A DNA P 650 708 -397 1 734 6148 1 1 3 chrUextra 19554017 19554701 -9449955 - SSU-rRNA_Dme rRNA rRNA -634 1361 679 1 734 1698 21 0 0 chrUextra 19554801 19554994 -9449662 - PROTOP_A DNA P -912 193 1 1 734 2016 122 26 0 chrUextra 19554994 19555378 -9449278 + TART_B1 LINE telomeric 1851 2244 -8410 1 734 6031 10 0 0 chrUextra 19555585 19556269 -9448387 - ROO_I LTR Pao -5182 3074 2391 1 734 5859 6 0 0 chrUextra 19556369 19557053 -9447603 - R1_DM LINE R1 -188 5168 4485 1 734 1590 181 9 7 chrUextra 19557153 19557829 -9446827 + SAR_DM Satellite Satellite 1 677 -677 1 734 5572 18 3 0 chrUextra 19557937 19558621 -9446035 + PROTOP_A DNA P 4 689 -416 1 734 2852 181 7 19 chrUextra 19558723 19559405 -9445251 - SAR_DM Satellite Satellite -369 1103 430 1 734 3009 246 37 40 chrUextra 19559505 19560970 -9443686 + SAR_DM Satellite Satellite 1 1461 -416 1 734 4387 21 63 30 chrUextra 19561073 19561371 -9443285 - DM176_I LTR Gypsy -5593 827 535 1 734 180 0 0 0 chrUextra 19561371 19561391 -9443265 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 734 181 30 29 57 chrUextra 19561399 19561434 -9443222 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1 734 4387 21 63 30 chrUextra 19561434 19561757 -9442899 - DM176_I LTR Gypsy -5894 526 176 1 734 5627 1 0 0 chrUextra 19561857 19562541 -9442115 + DM176_I LTR Gypsy 854 1537 -4883 1 734 204 40 0 0 chrUextra 19563105 19563130 -9441526 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 734 1960 186 37 10 chrUextra 19564209 19564893 -9439763 - SAR_DM Satellite Satellite -667 702 1 1 734 2676 201 17 22 chrUextra 19564998 19565676 -9438980 + SAR_DM Satellite Satellite 1 674 -208 1 734 2103 121 11 27 chrUextra 19565777 19566450 -9438206 + DMSAT6 Satellite Satellite 1 661 -26 1 734 2608 199 5 8 chrUextra 19566565 19567208 -9437448 - SAR_DM Satellite Satellite -637 835 195 1 734 749 123 0 0 chrUextra 19567115 19567245 -9437411 + ARS406_DM Unknown Unknown 1 130 -223 1 734 1853 30 0 8 chrUextra 19567345 19567580 -9437076 - G_DM LINE Jockey -1461 2885 2653 1 734 246 150 0 0 chrUextra 19567630 19567670 -9436986 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 734 1462 28 18 32 chrUextra 19567740 19567959 -9436697 + NTS_DM Other Other 25 240 0 1 734 576 29 0 0 chrUextra 19567959 19568029 -9436627 + NTS_DM Other Other 1 70 -170 1 734 5542 3 5 8 chrUextra 19568129 19568798 -9435858 + LSU-rRNA_Dme rRNA rRNA 1122 1788 -2112 1 734 237 183 58 47 chrUextra 19569193 19569279 -9435377 + DNAREP1_DM LINE Penelope 34 120 -474 1 734 381 266 15 24 chrUextra 19569698 19569919 -9434737 - ZAM_I LTR Gypsy -2411 5079 4924 1 734 23 33 0 0 chrUextra 19570152 19570182 -9434474 + AT_rich Low_complexity Low_complexity 1 30 0 1 734 328 229 0 57 chrUextra 19570282 19570381 -9434275 - Gypsy5_I LTR Gypsy -2979 3530 3449 1 734 5109 19 2 2 chrUextra 19570481 19571101 -9433555 + R1_DM LINE R1 4737 5356 0 1 734 243 0 0 0 chrUextra 19571135 19571165 -9433491 + R1_DM LINE R1 1 30 -5326 1 734 5445 41 0 0 chrUextra 19571265 19571948 -9432708 + DIVER_I LTR Pao 3111 3793 -1850 1 734 5744 6 0 1 chrUextra 19572048 19572731 -9431925 - Gypsy4_I LTR Gypsy -671 5617 4936 1 734 360 194 9 19 chrUextra 19572832 19572937 -9431719 + XDMR_DM Unknown Unknown 257 360 0 1 734 2671 186 9 20 chrUextra 19572851 19573514 -9431142 - SAR_DM Satellite Satellite -353 1119 464 1 734 5536 0 0 0 chrUextra 19573657 19574297 -9430359 + QUASIMODO_LTR LTR Gypsy 1 640 -18 1 734 5829 0 0 1 chrUextra 19574397 19575079 -9429577 - R1_DM LINE R1 -2046 3310 2630 1 734 2944 169 35 10 chrUextra 19575180 19575861 -9428795 + SAR_DM Satellite Satellite 374 1071 -401 1 734 2684 182 20 28 chrUextra 19575963 19576646 -9428010 - SAR_DM Satellite Satellite -311 1161 484 1 734 5810 1 0 0 chrUextra 19576746 19577429 -9427227 + LSU-rRNA_Dme rRNA rRNA 433 1115 -2785 1 734 5448 27 0 13 chrUextra 19577529 19578212 -9426444 + FW_DM LINE Jockey 813 1486 -3206 1 734 5851 1 0 1 chrUextra 19578312 19578995 -9425661 + FW_DM LINE Jockey 3919 4600 -92 1 734 3134 158 8 9 chrUextra 19579095 19579753 -9424903 + SAR_DM Satellite Satellite 400 1056 -416 1 734 2224 108 28 25 chrUextra 19579879 19580561 -9424095 - DMSAT6 Satellite Satellite -3 684 1 1 734 2700 54 4 193 chrUextra 19580661 19581344 -9423312 + BATUMI_I LTR Pao 331 884 -7079 1 734 5256 11 17 0 chrUextra 19581444 19582087 -9422569 + STALKER4_I LTR Gypsy 1995 2648 -3882 1 734 1613 186 21 31 chrUextra 19582227 19582609 -9422047 - Gypsy12_LTR LTR Gypsy -1958 378 1 1 734 1719 78 202 3 chrUextra 19582609 19582910 -9421746 - Gypsy12_I LTR Gypsy 0 5546 5186 1 734 4336 88 0 40 chrUextra 19583793 19584476 -9420180 + Gypsy12_I LTR Gypsy 651 1306 -4240 1 734 5940 0 0 0 chrUextra 19584576 19585259 -9419397 - R1_DM LINE R1 -3013 2343 1661 1 734 2923 172 8 11 chrUextra 19585363 19586026 -9418630 - SAR_DM Satellite Satellite -620 852 192 1 734 670 107 0 9 chrUextra 19585929 19586042 -9418614 + ARS406_DM Unknown Unknown 1 112 -241 1 734 4653 37 143 1 chrUextra 19586145 19586825 -9417831 + R1_DM LINE R1 1086 1861 -3495 1 734 5781 12 1 1 chrUextra 19586925 19587608 -9417048 - BATUMI_I LTR Pao -2356 5607 4925 1 734 244 128 0 21 chrUextra 19587776 19587824 -9416832 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 734 3025 182 6 7 chrUextra 19588491 19589172 -9415484 + SAR_DM Satellite Satellite 250 929 -543 1 734 1771 173 21 10 chrUextra 19589277 19589957 -9414699 - SAR_DM Satellite Satellite -511 687 1 1 734 2278 0 8 0 chrUextra 19590057 19590322 -9414334 + SSU-rRNA_Dme rRNA rRNA 1729 1995 0 1 734 21 89 0 0 chrUextra 19590341 19590397 -9414259 + AT_rich Low_complexity Low_complexity 1 56 0 1 734 757 201 1 0 chrUextra 19591239 19591396 -9413260 - Gypsy3_I LTR Gypsy -4643 1534 1398 1 734 1176 0 0 0 chrUextra 19591768 19591903 -9412753 - 5S_DM RNA RNA 0 135 1 1 734 1176 0 0 0 chrUextra 19592137 19592272 -9412384 - 5S_DM RNA RNA 0 135 1 1 734 1233 38 0 0 chrUextra 19592930 19593089 -9411567 + (ATAAG)n Simple_repeat Simple_repeat 1 159 0 1 734 316 187 26 1 chrUextra 19593192 19593276 -9411380 + HETA LINE telomeric 5617 5693 -388 1 734 520 130 62 14 chrUextra 19593285 19593428 -9411228 + TART LINE telomeric 10370 10489 -3988 1 734 2793 45 0 51 chrUextra 19593477 19593872 -9410784 + PROTOP DNA P 1 375 -4105 1 734 1759 9 0 94 chrUextra 19593972 19594228 -9410428 - DM176_LTR LTR Gypsy -275 232 1 1 734 3366 12 0 0 chrUextra 19594228 19594655 -9410001 - DM176_I LTR Gypsy 0 6420 5994 1 734 2939 176 9 9 chrUextra 19594758 19595428 -9409228 + SAR_DM Satellite Satellite 234 903 -569 1 734 1133 8 0 0 chrUextra 19596321 19596452 -9408204 - R1_DM LINE R1 -1001 4355 4225 1 734 4830 2 0 0 chrUextra 19596450 19597004 -9407652 - LSU-rRNA_Dme rRNA rRNA -1257 2643 2090 1 734 2396 182 53 16 chrUextra 19597106 19597787 -9406869 + SAR_DM Satellite Satellite 296 1001 -471 1 734 2765 189 7 18 chrUextra 19597887 19598570 -9406086 - SAR_DM Satellite Satellite -369 1103 428 1 734 2657 184 16 20 chrUextra 19598670 19599352 -9405304 + SAR_DM Satellite Satellite 481 1159 -313 1 734 2328 14 3 0 chrUextra 19599453 19599735 -9404921 + R1_DM LINE R1 4784 5066 -290 1 734 943 35 0 0 chrUextra 19599732 19599846 -9404810 + R1_DM LINE R1 5243 5356 0 1 734 1740 78 16 0 chrUextra 19599879 19600136 -9404520 + R1_DM LINE R1 1 261 -5095 1 734 5731 0 0 0 chrUextra 19600236 19600919 -9403737 + HMSBEAGLE_I LTR Gypsy 84 766 -5763 1 734 884 74 6 21 chrUextra 19601038 19601702 -9402954 - RSP Satellite Satellite 0 654 1 1 734 2842 181 7 19 chrUextra 19601804 19602485 -9402171 - SAR_DM Satellite Satellite -361 1111 439 1 734 28 48 0 0 chrUextra 19602810 19602852 -9401804 + AT_rich Low_complexity Low_complexity 1 42 0 1 734 32 0 0 0 chrUextra 19603180 19603212 -9401444 + AT_rich Low_complexity Low_complexity 1 32 0 1 734 2362 100 10 38 chrUextra 19604151 19604834 -9399822 - DMSAT6 Satellite Satellite -23 664 1 1 734 4030 2 0 0 chrUextra 19604934 19605408 -9399248 - QUASIMODO_LTR LTR Gypsy -184 474 1 1 734 1156 100 0 21 chrUextra 19605423 19605617 -9399039 + QUASIMODO_LTR LTR Gypsy 52 241 -417 1 734 3419 10 0 0 chrUextra 19605717 19606116 -9398540 + DMRT1B LINE R1 4785 5183 0 1 734 1334 178 4 0 chrUextra 19606130 19606399 -9398257 + TART LINE telomeric 8952 9221 -5256 1 734 865 284 21 35 chrUextra 19606766 19607183 -9397473 + Copia2_I LTR Copia 1392 1895 -2267 1 734 23 0 0 0 chrUextra 19607299 19607322 -9397334 + AT_rich Low_complexity Low_complexity 1 23 0 1 734 2782 173 60 22 chrUextra 19608070 19608749 -9395907 - SAR_DM Satellite Satellite -435 1037 333 1 734 230 281 11 11 chrUextra 19609112 19609202 -9395454 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 1 734 2947 183 7 7 chrUextra 19609632 19610314 -9394342 + SAR_DM Satellite Satellite 198 879 -593 1 734 684 81 10 1 chrUextra 19610415 19610526 -9394130 - Invader2_I LTR Gypsy -630 3962 3861 1 734 1380 101 34 11 chrUextra 19610530 19610832 -9393824 - Invader2_I LTR Gypsy -799 3793 3419 1 734 2001 38 11 4 chrUextra 19610832 19611098 -9393558 + IDEFIX_LTR LTR Gypsy 1 268 -326 1 734 2952 179 9 9 chrUextra 19611200 19611877 -9392779 - SAR_DM Satellite Satellite -397 1075 399 1 734 5468 38 3 0 chrUextra 19611981 19612664 -9391992 - R1_DM LINE R1 -1807 3549 2865 1 734 362 0 0 0 chrUextra 19612764 19612805 -9391851 - NTS_DM Other Other -162 78 38 1 734 870 9 0 27 chrUextra 19612805 19612917 -9391739 - NTS_DM Other Other -107 133 25 1 734 1252 18 0 6 chrUextra 19612970 19613135 -9391521 - NTS_DM Other Other -39 201 38 1 734 870 9 0 27 chrUextra 19613135 19613247 -9391409 - NTS_DM Other Other -107 133 25 1 734 22 56 0 0 chrUextra 19613273 19613309 -9391347 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 255 125 0 0 chrUextra 19613322 19613362 -9391294 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19613405 19613445 -9391211 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 5004 42 3 6 chrUextra 19613586 19614230 -9390426 - BATUMI_I LTR Pao -5356 2607 1966 1 734 314 328 16 11 chrUextra 19614660 19614851 -9389805 - BLASTOPIA_I LTR Gypsy -749 3732 3541 1 734 869 66 102 0 chrUextra 19615113 19615250 -9389406 + ARS406_DM Unknown Unknown 39 189 -164 1 734 2941 174 11 8 chrUextra 19615141 19615796 -9388860 - SAR_DM Satellite Satellite -549 923 267 1 734 548 42 0 0 chrUextra 19615896 19615967 -9388689 + DIVER2_I LTR Pao 4077 4147 0 1 734 3029 42 3 8 chrUextra 19615967 19616354 -9388302 + DIVER2_LTR LTR Pao 1 385 0 1 734 5735 0 1 0 chrUextra 19616679 19617359 -9387297 + ROO_I LTR Pao 3312 3992 -4264 1 734 2181 283 10 6 chrUextra 19618248 19618928 -9385728 - Gypsy6_I LTR Gypsy -276 6736 6054 1 734 586 115 0 9 chrUextra 19619030 19619135 -9385521 - ARS406_DM Unknown Unknown -249 104 1 1 734 2778 177 9 8 chrUextra 19619045 19619694 -9384962 + SAR_DM Satellite Satellite 198 847 -625 1 734 415 250 20 0 chrUextra 19619563 19619711 -9384945 - XDMR Unknown Unknown 0 361 211 1 734 420 185 0 0 chrUextra 19621165 19621273 -9383383 + (CATAA)n Simple_repeat Simple_repeat 2 109 0 1 734 587 132 0 0 chrUextra 19621377 19621483 -9383173 - ARS406_DM Unknown Unknown -247 106 1 1 734 2914 183 13 5 chrUextra 19621390 19622060 -9382596 + SAR_DM Satellite Satellite 195 870 -602 1 734 58 107 0 0 chrUextra 19622231 19622464 -9382192 + AT_rich Low_complexity Low_complexity 1 233 0 1 734 413 162 127 0 chrUextra 19622468 19622838 -9381818 + (TATATG)n Simple_repeat Simple_repeat 1 417 0 1 734 5473 32 1 3 chrUextra 19622943 19623626 -9381030 + R1_DM LINE R1 1964 2645 -2711 1 734 690 0 0 0 chrUextra 19623726 19623805 -9380851 - SSU-rRNA_Dme rRNA rRNA -1916 79 1 1 734 406 0 37 0 chrUextra 19623902 19623956 -9380700 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 734 28 48 0 0 chrUextra 19624175 19624217 -9380439 + AT_rich Low_complexity Low_complexity 1 42 0 1 734 1113 0 25 19 chrUextra 19624509 19624668 -9379988 + NTS_DM Other Other 81 240 0 1 734 1831 0 17 17 chrUextra 19624668 19624908 -9379748 + NTS_DM Other Other 1 240 0 1 734 1861 0 17 13 chrUextra 19624908 19625147 -9379509 + NTS_DM Other Other 1 240 0 1 734 392 0 0 0 chrUextra 19625147 19625192 -9379464 + NTS_DM Other Other 1 45 -195 1 734 5972 0 0 0 chrUextra 19625292 19625975 -9378681 + DM1731_I LTR Copia 2310 2992 -984 1 734 5741 7 1 0 chrUextra 19626860 19627541 -9377115 - FW_DM LINE Jockey -3834 858 177 1 734 2703 0 0 3 chrUextra 19627641 19627973 -9376683 + POGO DNA Pogo 1791 2121 0 1 734 5796 1 1 1 chrUextra 19628424 19629107 -9375549 - G_DM LINE Jockey -2093 2253 1571 1 734 542 91 0 0 chrUextra 19629211 19629299 -9375357 - MICROPIA_I LTR Gypsy -507 3969 3882 1 734 4253 44 34 0 chrUextra 19629324 19629890 -9374766 - TRANSIB2 DNA Transib -995 1849 1265 1 734 34 24 0 0 chrUextra 19630491 19630532 -9374124 + AT_rich Low_complexity Low_complexity 1 41 0 1 734 21 0 0 0 chrUextra 19630844 19630865 -9373791 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 3769 82 42 6 chrUextra 19631556 19632181 -9372475 - STALKER4_I LTR Gypsy -4866 1664 1018 1 734 5766 7 0 1 chrUextra 19632342 19633022 -9371634 - DMRT1B LINE R1 -468 4715 4037 1 734 840 9 0 35 chrUextra 19633130 19633243 -9371413 - NTS_DM Other Other -107 133 25 1 734 22 56 0 0 chrUextra 19633269 19633305 -9371351 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 255 125 0 0 chrUextra 19633318 19633358 -9371298 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19633401 19633441 -9371215 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19633493 19633533 -9371123 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19633585 19633625 -9371031 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 22 56 0 0 chrUextra 19633630 19633666 -9370990 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 560 15 0 0 chrUextra 19633738 19633805 -9370851 - LSU-rRNA_Dme rRNA rRNA 0 3900 3834 1 734 5879 0 1 0 chrUextra 19633905 19634588 -9370068 - R1_DM LINE R1 -3158 2198 1515 1 734 2759 178 15 9 chrUextra 19634688 19635336 -9369320 - SAR_DM Satellite Satellite -626 846 195 1 734 792 102 0 0 chrUextra 19635243 19635371 -9369285 + ARS406_DM Unknown Unknown 1 128 -225 1 734 4883 67 9 3 chrUextra 19635472 19636150 -9368506 + QUASIMODO_I LTR Gypsy 261 942 -5118 1 734 1492 5 0 0 chrUextra 19636254 19636438 -9368218 + ROO_I LTR Pao 8073 8256 0 1 734 3642 12 0 2 chrUextra 19636438 19636867 -9367789 + ROO_LTR LTR Pao 1 428 0 1 734 617 0 0 0 chrUextra 19636867 19636937 -9367719 + ROO_I LTR Pao 1 70 -8186 1 734 1229 25 0 12 chrUextra 19637037 19637202 -9367454 - NTS_DM Other Other -77 163 1 1 734 1756 17 17 17 chrUextra 19637202 19637442 -9367214 - NTS_DM Other Other 0 240 1 1 734 1438 15 20 20 chrUextra 19637442 19637645 -9367011 - NTS_DM Other Other 0 240 38 1 734 579 13 0 0 chrUextra 19637645 19637720 -9366936 - NTS_DM Other Other -107 133 59 1 734 1842 183 13 10 chrUextra 19637820 19638502 -9366154 - SAR_DM Satellite Satellite -845 683 1 1 734 5809 10 0 1 chrUextra 19638605 19639286 -9365370 + Gypsy4_I LTR Gypsy 2129 2808 -3480 1 734 227 89 12 12 chrUextra 19640169 19640249 -9364407 + S_DM DNA Tc1 109 188 -1548 1 734 22 56 0 0 chrUextra 19640363 19640399 -9364257 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 5906 1 1 1 chrUextra 19640952 19641635 -9363021 + SSU-rRNA_Dme rRNA rRNA 616 1298 -697 1 734 34 24 0 0 chrUextra 19642289 19642330 -9362326 + AT_rich Low_complexity Low_complexity 1 41 0 1 734 391 113 0 27 chrUextra 19642609 19642673 -9361983 - DMTOM1_LTR LTR Gypsy 0 410 349 1 734 571 148 40 16 chrUextra 19642673 19642797 -9361859 - DMTOM1_LTR LTR Gypsy 0 410 284 1 734 254 190 17 0 chrUextra 19642814 19642872 -9361784 - DM176_LTR LTR Gypsy -141 366 308 1 734 248 133 22 0 chrUextra 19642991 19643036 -9361620 - DM176_LTR LTR Gypsy -238 269 224 1 734 5977 0 1 0 chrUextra 19643301 19643984 -9360672 - SSU-rRNA_Dme rRNA rRNA -1016 979 296 1 734 5873 3 0 3 chrUextra 19644084 19644766 -9359890 + SSU-rRNA_Dme rRNA rRNA 493 1172 -823 1 734 1605 9 19 14 chrUextra 19644867 19645081 -9359575 + NTS_DM Other Other 26 240 0 1 734 1301 6 0 18 chrUextra 19645081 19645246 -9359410 + NTS_DM Other Other 1 162 -78 1 734 488 119 36 0 chrUextra 19645356 19645440 -9359216 + NTS_DM Other Other 4 90 -150 1 734 293 111 19 0 chrUextra 19645650 19645704 -9358952 - ARS406_DM Unknown Unknown -297 56 2 1 734 2863 185 6 8 chrUextra 19645665 19646324 -9358332 + SAR_DM Satellite Satellite 246 903 -569 1 734 2863 207 48 7 chrUextra 19646433 19647113 -9357543 + TOM_I LTR Gypsy 2364 3071 -3041 1 734 697 193 0 7 chrUextra 19647619 19647765 -9356891 + DMLTR5 LTR Gypsy 122 266 0 1 734 351 49 65 16 chrUextra 19647764 19647826 -9356830 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 734 244 128 0 21 chrUextra 19647848 19647896 -9356760 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 734 313 279 107 89 chrUextra 19648191 19648471 -9356185 + Invader1_LTR LTR Gypsy 84 368 -55 1 734 285 305 20 20 chrUextra 19648985 19649148 -9355508 - Gypsy3_I LTR Gypsy -4829 1348 1218 1 734 5797 4 0 3 chrUextra 19649565 19650244 -9354412 + DOC LINE Jockey 3130 3806 -919 1 734 5491 32 0 0 chrUextra 19650348 19651031 -9353625 - R1_DM LINE R1 -2469 2887 2205 1 734 273 306 83 68 chrUextra 19651257 19651787 -9352869 - HMSBEAGLE_I LTR Gypsy -1567 4962 4425 1 734 448 48 0 0 chrUextra 19651915 19651978 -9352678 - S_DM DNA Tc1 -167 1569 1507 1 734 2357 86 29 7 chrUextra 19651977 19652388 -9352268 - S_DM DNA Tc1 -1316 420 1 1 734 1034 15 0 8 chrUextra 19652388 19652515 -9352141 - CIRCE LINE Composite -1861 4495 4370 1 734 266 69 30 121 chrUextra 19652515 19652581 -9352075 - ROVER-LTR_DM LTR Gypsy 0 367 308 1 734 1557 17 0 0 chrUextra 19652711 19652891 -9351765 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 734 2815 177 13 23 chrUextra 19653480 19654163 -9350493 + SAR_DM Satellite Satellite 436 1111 -361 1 734 5710 6 1 7 chrUextra 19654263 19654946 -9349710 + LSU-rRNA_Dme rRNA rRNA 758 1436 -2464 1 734 5314 31 7 4 chrUextra 19655829 19656512 -9348144 - MDG1_I LTR Gypsy -4538 2058 1374 1 734 254 188 16 0 chrUextra 19656616 19656680 -9347976 + XDMR Unknown Unknown 297 361 0 1 734 2775 172 12 27 chrUextra 19656625 19657295 -9347361 - SAR_DM Satellite Satellite -354 1118 459 1 734 2662 177 19 25 chrUextra 19657400 19658077 -9346579 + SAR_DM Satellite Satellite 180 852 -620 1 734 3293 0 3 0 chrUextra 19658180 19658557 -9346099 - LSU-rRNA_Dme rRNA rRNA -1735 2165 1788 1 734 2133 0 8 4 chrUextra 19658601 19658861 -9345795 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1528 1 734 2967 77 81 113 chrUextra 19658973 19659644 -9345012 + PROTOP_B DNA P 420 1068 -85 1 734 5822 3 1 3 chrUextra 19659745 19660427 -9344229 - LSU-rRNA_Dme rRNA rRNA -2441 1459 779 1 734 210 37 0 0 chrUextra 19660600 19660627 -9344029 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 734 511 193 16 16 chrUextra 19660627 19660748 -9343908 + HETRP_DM Satellite Satellite 1549 1669 -203 1 735 192 40 0 0 chrUextra 19660906 19660931 -9343725 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 735 507 208 8 16 chrUextra 19660931 19661053 -9343603 + HETRP_DM Satellite Satellite 1549 1669 -203 1 735 1423 48 14 28 chrUextra 19661310 19661524 -9343132 + PROTOP_B DNA P 268 478 -675 1 735 3544 67 0 4 chrUextra 19661501 19661993 -9342663 + HOBO DNA hAT 330 819 -2197 1 735 2583 118 77 44 chrUextra 19662096 19662774 -9341882 + TART LINE telomeric 9359 9964 -499 1 735 4872 62 3 3 chrUextra 19662906 19663559 -9341097 + R1_DM LINE R1 1 653 -4703 1 735 5348 32 22 1 chrUextra 19663659 19664337 -9340319 - DMCR1A LINE CR1 -3472 998 307 1 735 5464 37 0 0 chrUextra 19664442 19665125 -9339531 - R1_DM LINE R1 -535 4821 4139 1 735 3012 183 7 6 chrUextra 19665227 19665904 -9338752 - SAR_DM Satellite Satellite -549 923 246 1 735 558 142 142 0 chrUextra 19666008 19666114 -9338542 + DM412 LTR Gypsy 6062 6182 -715 1 735 3294 31 28 0 chrUextra 19666117 19666540 -9338116 + PROTOP_A DNA P 1 435 -670 1 735 311 26 0 0 chrUextra 19666537 19666576 -9338080 + PROTOP_B DNA P 513 551 -602 1 735 750 61 0 0 chrUextra 19666575 19666674 -9337982 + PROTOP_B DNA P 985 1080 -73 1 735 5824 6 1 0 chrUextra 19666791 19667474 -9337182 + Gypsy6_I LTR Gypsy 1674 2357 -4655 1 735 5593 28 0 0 chrUextra 19667574 19668257 -9336399 + R1_DM LINE R1 1464 2146 -3210 1 735 5725 6 1 0 chrUextra 19668357 19669040 -9335616 - R1_DM LINE R1 -4452 904 221 1 735 28 48 0 0 chrUextra 19669264 19669306 -9335350 + AT_rich Low_complexity Low_complexity 1 42 0 1 735 488 119 36 0 chrUextra 19669579 19669663 -9334993 - NTS_DM Other Other -150 90 4 1 735 256 21 0 60 chrUextra 19669773 19669823 -9334833 - NTS_DM Other Other -78 162 116 1 735 24 67 0 0 chrUextra 19670218 19670263 -9334393 + AT_rich Low_complexity Low_complexity 1 45 0 1 735 1997 20 8 0 chrUextra 19670356 19670606 -9334050 + G2_DM LINE Jockey 2719 2970 -132 1 735 2698 190 18 10 chrUextra 19670718 19671389 -9333267 - SAR_DM Satellite Satellite -396 1076 401 1 735 1586 127 0 90 chrUextra 19671504 19671815 -9332841 + STALKER4_I LTR Gypsy 1912 2194 -4336 1 735 280 28 0 0 chrUextra 19671824 19671860 -9332796 + STALKER4_I LTR Gypsy 2315 2350 -4180 1 735 1446 100 29 0 chrUextra 19671862 19672103 -9332553 + STALKER4_I LTR Gypsy 2617 2864 -3666 1 735 464 0 14 57 chrUextra 19672102 19672172 -9332484 - Gypsy6A_LTR LTR Gypsy -70 350 284 1 735 4657 60 38 0 chrUextra 19672272 19672955 -9331701 + IDEFIX_I LTR Gypsy 4461 5169 -459 1 735 2679 190 8 18 chrUextra 19673055 19673738 -9330918 + SAR_DM Satellite Satellite 1 676 -361 1 735 58 15 0 0 chrUextra 19674107 19674172 -9330484 + AT_rich Low_complexity Low_complexity 1 65 0 1 735 21 36 0 0 chrUextra 19674346 19674374 -9330282 + AT_rich Low_complexity Low_complexity 1 28 0 1 735 862 338 17 11 chrUextra 19674626 19675090 -9329566 + Gypsy_I LTR Gypsy 4514 4980 -1527 1 735 2528 163 40 9 chrUextra 19675469 19676045 -9328611 + ROVER-I_DM LTR Gypsy 5990 6583 -1 1 735 1992 27 0 8 chrUextra 19676187 19676445 -9328211 - R1_DM LINE R1 -1350 4006 3751 1 735 3632 5 0 0 chrUextra 19676438 19676870 -9327786 - R1_DM LINE R1 -2215 3141 2710 1 735 2768 197 25 4 chrUextra 19676970 19677653 -9327003 - SAR_DM Satellite Satellite -441 1031 335 1 735 5371 38 0 0 chrUextra 19678536 19679219 -9325437 - IDEFIX_I LTR Gypsy -2967 2661 1979 1 735 4585 16 2 0 chrUextra 19679319 19679865 -9324791 + R1_DM LINE R1 4810 5356 0 1 735 1166 14 0 0 chrUextra 19679863 19680002 -9324654 + LSU-rRNA_Dme rRNA rRNA 2640 2778 -1122 1 735 2373 186 35 8 chrUextra 19680102 19680785 -9323871 - SAR_DM Satellite Satellite -667 701 1 1 735 5653 10 1 0 chrUextra 19680885 19681568 -9323088 + STALKER4_I LTR Gypsy 3314 3997 -2533 1 735 2685 181 44 3 chrUextra 19681668 19682331 -9322325 + SAR_DM Satellite Satellite 387 1076 -396 1 735 921 82 9 22 chrUextra 19682451 19683126 -9321530 + RSP Satellite Satellite 1 666 0 1 735 2479 186 23 12 chrUextra 19683234 19683917 -9320739 - SAR_DM Satellite Satellite -677 690 1 1 735 2996 176 6 8 chrUextra 19684021 19684680 -9319976 - SAR_DM Satellite Satellite -620 852 195 1 735 675 115 0 0 chrUextra 19684587 19684700 -9319956 + ARS406_DM Unknown Unknown 1 113 -240 1 735 3270 161 9 9 chrUextra 19684801 19685483 -9319173 + SAR_DM Satellite Satellite 352 1033 -439 1 735 2775 65 11 0 chrUextra 19685583 19685953 -9318703 - R1_DM LINE R1 -3726 1630 1257 1 735 2493 29 3 0 chrUextra 19685953 19686266 -9318390 - R1_DM LINE R1 -87 5269 4956 1 735 1740 177 25 9 chrUextra 19686463 19687031 -9317625 + SAR_DM Satellite Satellite 1 577 -749 1 735 803 136 0 0 chrUextra 19686909 19687049 -9317607 - ARS406_DM Unknown Unknown -164 189 50 1 735 5950 3 1 0 chrUextra 19687149 19687832 -9316824 - SSU-rRNA_Dme rRNA rRNA -1234 761 78 1 735 5839 4 0 1 chrUextra 19687932 19688615 -9316041 - R1_DM LINE R1 -353 5003 4322 1 735 288 283 9 9 chrUextra 19688723 19688837 -9315819 + DM297_I LTR Gypsy 2878 2991 -3176 1 735 474 315 68 7 chrUextra 19688980 19689308 -9315348 + Gypsy4_I LTR Gypsy 3190 3538 -2883 1 735 5828 6 0 1 chrUextra 19689498 19690181 -9314475 + R1_DM LINE R1 4519 5200 -156 1 735 2065 160 11 8 chrUextra 19690281 19690953 -9313703 - SAR_DM Satellite Satellite -430 673 1 1 735 3030 172 7 10 chrUextra 19691065 19691747 -9312909 + SAR_DM Satellite Satellite 199 878 -594 1 735 5899 0 0 1 chrUextra 19691847 19692530 -9312126 + DOC LINE Jockey 1875 2556 -2169 1 735 2687 48 56 3 chrUextra 19692630 19693004 -9311652 + PROTOP_A DNA P 712 1105 0 1 735 5964 0 0 1 chrUextra 19693413 19694096 -9310560 - LSU-rRNA_Dme rRNA rRNA -498 3402 2721 1 735 2906 182 10 10 chrUextra 19694196 19694879 -9309777 + SAR_DM Satellite Satellite 237 919 -553 1 735 3597 0 7 2 chrUextra 19694979 19695406 -9309250 + LSU-rRNA_Dme rRNA rRNA 1360 1788 -2112 1 735 1834 0 5 0 chrUextra 19695450 19695662 -9308994 + LSU-rRNA_Dme rRNA rRNA 1788 2000 -1900 1 735 5720 10 0 0 chrUextra 19695762 19696445 -9308211 + STALKER4_I LTR Gypsy 5161 5843 -687 1 735 1350 60 5 0 chrUextra 19696548 19696732 -9307924 - R1_DM LINE R1 -5171 185 1 1 735 3132 15 123 0 chrUextra 19696765 19697228 -9307428 - R1_DM LINE R1 0 5356 4837 1 735 5573 12 0 1 chrUextra 19697328 19698011 -9306645 + QUASIMODO_I LTR Gypsy 1214 1895 -4165 1 735 5852 0 1 4 chrUextra 19698111 19698794 -9305862 + SSU-rRNA_Dme rRNA rRNA 670 1350 -645 1 735 1079 0 16 0 chrUextra 19698894 19699020 -9305636 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 1 735 2721 30 0 0 chrUextra 19699020 19699355 -9305301 - DM1731_LTR LTR Copia -1 335 1 1 735 1784 9 0 22 chrUextra 19699355 19699577 -9305079 - DM1731_I LTR Copia 0 3976 3760 1 735 246 250 0 0 chrUextra 19699715 19699771 -9304885 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 1 735 1180 266 21 67 chrUextra 19699783 19700352 -9304304 + Gypsy12_LTR LTR Gypsy 524 1066 -1270 1 735 924 205 4 0 chrUextra 19700459 19700693 -9303963 - ROVER-I_DM LTR Gypsy -360 6224 5990 1 735 2187 163 2 2 chrUextra 19700728 19701141 -9303515 - ROVER-I_DM LTR Gypsy -1276 5308 4896 1 735 2945 19 3 3 chrUextra 19701241 19701604 -9303052 + R1_DM LINE R1 3724 4086 -1270 1 735 2544 37 0 0 chrUextra 19701602 19701923 -9302733 + R1_DM LINE R1 4559 4879 -477 1 735 5831 3 0 0 chrUextra 19702023 19702705 -9301951 - LSU-rRNA_Dme rRNA rRNA -2698 1202 521 1 735 5789 1 1 4 chrUextra 19702805 19703487 -9301169 + LSU-rRNA_Dme rRNA rRNA 694 1373 -2527 1 735 2518 29 0 0 chrUextra 19703587 19703895 -9300761 - PROTOP_A DNA P -797 308 1 1 735 5890 1 1 1 chrUextra 19704369 19705051 -9299605 + SSU-rRNA_Dme rRNA rRNA 557 1238 -757 1 735 2823 179 12 8 chrUextra 19705155 19705810 -9298846 - SAR_DM Satellite Satellite -620 852 195 1 735 686 113 0 0 chrUextra 19705717 19705832 -9298824 + ARS406_DM Unknown Unknown 1 115 -238 1 735 2700 175 18 24 chrUextra 19707501 19708179 -9296477 - SAR_DM Satellite Satellite -512 960 287 1 735 5902 1 0 0 chrUextra 19708279 19708961 -9295695 - BLOOD_I LTR Gypsy -2000 4613 3932 1 735 5726 16 0 4 chrUextra 19709061 19709743 -9294913 + BATUMI_I LTR Pao 5123 5801 -2162 1 735 2765 6 3 0 chrUextra 19709843 19710178 -9294478 + HETA LINE telomeric 5745 6080 -1 1 735 1817 79 9 18 chrUextra 19710200 19710525 -9294131 + HETA LINE telomeric 1 622 -5459 1 735 2185 140 17 53 chrUextra 19710637 19711307 -9293349 + DMSAT6 Satellite Satellite 1 645 -3 1 735 5281 34 31 9 chrUextra 19711407 19712089 -9292567 - DOC3_DM LINE Jockey -635 4105 3409 1 735 5256 37 3 9 chrUextra 19712189 19712871 -9291785 + BATUMI_I LTR Pao 3196 3873 -4090 1 735 2658 191 11 18 chrUextra 19712971 19713653 -9291003 - SAR_DM Satellite Satellite -1043 677 1 1 735 5579 15 4 3 chrUextra 19713753 19714435 -9290221 - R1_DM LINE R1 -1180 4176 3494 1 735 282 89 0 0 chrUextra 19714535 19714580 -9290076 - ARS406_DM Unknown Unknown -308 45 1 1 735 3014 163 9 19 chrUextra 19714540 19715217 -9289439 + SAR_DM Satellite Satellite 246 915 -557 1 735 5571 7 0 1 chrUextra 19715317 19715999 -9288657 - ROO_I LTR Pao -77 8179 7499 1 735 1827 13 9 22 chrUextra 19716099 19716331 -9288325 + DM1731_I LTR Copia 3748 3976 0 1 735 2483 36 0 0 chrUextra 19716331 19716639 -9288017 + DM1731_LTR LTR Copia 29 336 0 1 735 1565 0 0 0 chrUextra 19716881 19717062 -9287594 - ROO_LTR LTR Pao -247 181 1 1 735 4311 8 0 0 chrUextra 19717062 19717563 -9287093 - R1_DM LINE R1 -431 4925 4425 1 735 3665 2 2 0 chrUextra 19717663 19718084 -9286572 - SSU-rRNA_Dme rRNA rRNA -1573 422 1 1 735 32 0 0 0 chrUextra 19718216 19718248 -9286408 + AT_rich Low_complexity Low_complexity 1 32 0 1 735 2514 97 18 9 chrUextra 19718445 19719126 -9285530 - DMSAT6 Satellite Satellite -106 686 1 1 735 5884 3 0 0 chrUextra 19719227 19719909 -9284747 + R1_DM LINE R1 4651 5332 -24 1 735 5479 4 7 1 chrUextra 19720009 19720691 -9283965 + MDG1_I LTR Gypsy 1041 1726 -4870 1 735 5667 21 1 0 chrUextra 19720791 19721471 -9283185 + R1_DM LINE R1 4296 4976 -380 1 735 2968 168 22 9 chrUextra 19721573 19722250 -9282406 - SAR_DM Satellite Satellite -418 1054 369 1 735 691 0 0 12 chrUextra 19722355 19722438 -9282218 - NTS_DM Other Other -158 82 1 1 735 1847 4 17 13 chrUextra 19722438 19722677 -9281979 - NTS_DM Other Other 0 240 1 1 735 1861 0 17 13 chrUextra 19722677 19722916 -9281740 - NTS_DM Other Other 0 240 1 1 735 814 0 33 25 chrUextra 19722916 19723037 -9281619 - NTS_DM Other Other 0 240 119 1 735 5223 18 26 13 chrUextra 19723920 19724601 -9280055 + IVK_DM LINE I 1185 1874 -3528 1 735 5814 4 10 0 chrUextra 19724701 19725383 -9279273 + DOC2_DM LINE Jockey 3579 4267 -526 1 735 2690 221 18 13 chrUextra 19725483 19726165 -9278491 - ROVER-I_DM LTR Gypsy -4052 2532 1848 1 735 5725 9 7 0 chrUextra 19726265 19726947 -9277709 - DMRT1A LINE R1 -102 5081 4395 1 735 5121 2 3 69 chrUextra 19727047 19727729 -9276927 - LSU-rRNA_Dme rRNA rRNA -1891 2009 1373 1 735 5848 7 0 1 chrUextra 19727831 19728511 -9276145 - Gypsy6_I LTR Gypsy -1791 5221 4543 1 735 4549 108 3 4 chrUextra 19729393 19730074 -9274582 - Gypsy12_I LTR Gypsy -2652 2894 2215 1 735 5196 2 0 2 chrUextra 19730175 19730770 -9273886 - SSU-rRNA_Dme rRNA rRNA -1401 594 1 1 735 5584 19 1 1 chrUextra 19730961 19731639 -9273017 + FW_DM LINE Jockey 3816 4493 -199 1 735 5626 18 1 1 chrUextra 19731739 19732421 -9272235 + FW_DM LINE Jockey 3210 3891 -801 1 735 5891 4 0 0 chrUextra 19732521 19733203 -9271453 + R1_DM LINE R1 4216 4897 -459 1 735 5868 0 0 1 chrUextra 19733303 19733985 -9270671 - R1_DM LINE R1 -3362 1994 1314 1 735 1404 0 0 0 chrUextra 19734085 19734241 -9270415 + (GAGAA)n Simple_repeat Simple_repeat 4 159 0 1 735 5492 12 3 0 chrUextra 19734867 19735549 -9269107 - Invader2_I LTR Gypsy -913 3679 2996 1 735 2776 76 11 42 chrUextra 19735649 19736101 -9268555 - Gypsy12_I LTR Gypsy -5108 438 1 1 735 1245 129 9 22 chrUextra 19736101 19736330 -9268326 - Gypsy12A_LTR LTR Gypsy 0 2280 2055 1 735 5213 29 0 5 chrUextra 19736431 19737099 -9267557 + CIRCE LINE Composite 4316 4980 -1376 1 735 5188 50 22 0 chrUextra 19737213 19737895 -9266761 - Baggins1 LINE LOA -390 5063 4367 1 735 5403 18 4 12 chrUextra 19737996 19738677 -9265979 - BATUMI_I LTR Pao -5764 2199 1524 1 735 488 119 36 0 chrUextra 19738819 19738903 -9265753 - NTS_DM Other Other -150 90 4 1 735 1301 6 0 18 chrUextra 19739014 19739179 -9265477 - NTS_DM Other Other -78 162 1 1 735 1847 4 17 13 chrUextra 19739179 19739418 -9265238 - NTS_DM Other Other 0 240 1 1 735 2061 109 36 55 chrUextra 19739561 19740234 -9264422 - DMSAT6 Satellite Satellite -151 659 1 1 735 2298 210 39 18 chrUextra 19740342 19741015 -9263641 + SAR_DM Satellite Satellite 432 1118 -354 1 735 901 45 45 0 chrUextra 19741123 19741255 -9263401 + ARS406_DM Unknown Unknown 52 189 -164 1 735 2803 167 36 14 chrUextra 19741138 19741805 -9262851 - SAR_DM Satellite Satellite -535 937 256 1 735 2390 207 18 12 chrUextra 19741908 19742587 -9262069 - SAR_DM Satellite Satellite -511 961 279 1 735 1222 18 0 12 chrUextra 19742726 19742892 -9261764 - NTS_DM Other Other -39 201 38 1 735 870 9 0 27 chrUextra 19742892 19743004 -9261652 - NTS_DM Other Other -107 133 25 1 735 22 56 0 0 chrUextra 19743030 19743066 -9261590 + AT_rich Low_complexity Low_complexity 1 36 0 1 735 255 125 0 0 chrUextra 19743079 19743119 -9261537 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 735 246 150 0 0 chrUextra 19743162 19743202 -9261454 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 735 246 150 0 0 chrUextra 19743254 19743294 -9261362 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 735 383 0 0 0 chrUextra 19743469 19743520 -9261136 + Copia_I LTR Copia 4543 4593 0 1 735 2286 4 0 0 chrUextra 19743520 19743796 -9260860 + Copia_LTR LTR Copia 1 276 0 1 735 232 0 0 0 chrUextra 19743796 19743830 -9260826 + Copia_LTR LTR Copia 243 276 0 1 735 23 68 0 0 chrUextra 19743918 19743962 -9260694 + AT_rich Low_complexity Low_complexity 1 44 0 1 735 3126 0 0 0 chrUextra 19744251 19744605 -9260051 - ROO_LTR LTR Pao -74 354 1 1 735 2761 12 3 3 chrUextra 19744605 19744933 -9259723 + BEL_I LTR Pao 139 466 -4938 1 735 3460 16 0 54 chrUextra 19745815 19746276 -9258380 - LSU-rRNA_Dme rRNA rRNA -3464 436 1 1 735 5490 12 0 0 chrUextra 19746597 19747279 -9257377 + IDEFIX_I LTR Gypsy 4494 5175 -453 1 735 595 149 16 8 chrUextra 19747379 19747501 -9257155 - ARS406_DM Unknown Unknown -221 132 10 1 735 2559 187 34 6 chrUextra 19747414 19748056 -9256600 + SAR_DM Satellite Satellite 191 850 -622 1 735 235 105 0 0 chrUextra 19748023 19748061 -9256595 - ARS406_DM Unknown Unknown -166 187 150 1 735 3679 123 3 3 chrUextra 19748943 19749624 -9255032 - BATUMI_I LTR Pao -3298 4616 3860 1 735 2556 3 0 0 chrUextra 19749725 19750030 -9254626 - QUASIMODO_LTR LTR Gypsy -353 305 1 1 735 335 89 0 0 chrUextra 19750030 19750085 -9254571 - PROTOP_A DNA P -401 704 650 1 735 2252 17 17 24 chrUextra 19750113 19750407 -9254249 - PROTOP DNA P -3149 1331 1040 1 735 3363 146 9 9 chrUextra 19750512 19751176 -9253480 + SAR_DM Satellite Satellite 369 1032 -440 1 735 5923 3 0 0 chrUextra 19751289 19751971 -9252685 + DOC LINE Jockey 3315 3996 -729 1 735 917 173 146 30 chrUextra 19752071 19752399 -9252257 + Gypsy12_LTR LTR Gypsy 1310 1675 -661 1 735 539 206 109 39 chrUextra 19752377 19752660 -9251996 + Gypsy12_LTR LTR Gypsy 1443 1714 -566 1 735 515 121 8 0 chrUextra 19752659 19752753 -9251903 + Gypsy12A_LTR LTR Gypsy 1166 1329 -1007 1 735 5797 9 0 0 chrUextra 19752853 19753535 -9251121 + R1_DM LINE R1 2084 2765 -2591 1 735 4801 24 150 10 chrUextra 19753635 19754317 -9250339 - BATUMI_I LTR Pao -4398 3565 2789 1 735 5741 0 1 1 chrUextra 19754417 19755099 -9249557 + LSU-rRNA_Dme rRNA rRNA 384 1065 -2835 1 735 4005 6 0 0 chrUextra 19755199 19755689 -9248967 - IDEFIX_I LTR Gypsy -873 4755 4266 1 735 2803 183 15 12 chrUextra 19755988 19756663 -9247993 - SAR_DM Satellite Satellite -535 937 261 1 735 2635 48 160 102 chrUextra 19756834 19757301 -9247355 - ROO_I LTR Pao -7110 1146 642 1 735 366 129 0 0 chrUextra 19757301 19757363 -9247293 + (CTG)n Simple_repeat Simple_repeat 1 62 0 1 735 2635 48 160 102 chrUextra 19757363 19757445 -9247211 - ROO_I LTR Pao -7615 641 566 1 735 21 89 0 0 chrUextra 19757746 19757802 -9246854 + AT_rich Low_complexity Low_complexity 1 56 0 1 735 3521 5 2 0 chrUextra 19757821 19758227 -9246429 - SSU-rRNA_Dme rRNA rRNA 0 1995 1589 1 735 2920 167 13 16 chrUextra 19758332 19759009 -9245647 - SAR_DM Satellite Satellite -514 958 284 1 735 2926 191 7 12 chrUextra 19759109 19759791 -9244865 + SAR_DM Satellite Satellite 1 678 -396 1 735 2709 15 0 3 chrUextra 19759891 19760233 -9244423 + IDEFIX_I LTR Gypsy 5288 5628 0 1 735 2627 32 0 3 chrUextra 19760233 19760573 -9244083 + IDEFIX_LTR LTR Gypsy 1 339 -255 1 735 2963 161 37 16 chrUextra 19760673 19761355 -9243301 + SAR_DM Satellite Satellite 333 1028 -444 1 735 34 24 0 0 chrUextra 19761602 19761643 -9243013 + AT_rich Low_complexity Low_complexity 1 41 0 1 735 21 95 0 0 chrUextra 19761856 19761919 -9242737 + AT_rich Low_complexity Low_complexity 1 63 0 1 735 1785 0 0 0 chrUextra 19761931 19762137 -9242519 + LSU-rRNA_Dme rRNA rRNA 1 206 -3694 1 735 857 0 0 10 chrUextra 19763022 19763126 -9241530 + LSU-rRNA_Dme rRNA rRNA 1686 1788 -2112 1 735 4638 2 0 0 chrUextra 19763170 19763701 -9240955 + LSU-rRNA_Dme rRNA rRNA 1788 2318 -1582 1 735 3155 163 12 9 chrUextra 19763802 19764483 -9240173 - SAR_DM Satellite Satellite -449 1023 341 1 735 267 27 0 0 chrUextra 19764583 19764620 -9240036 + BATUMI_I LTR Pao 7248 7284 -679 1 735 2804 82 87 29 chrUextra 19764620 19765147 -9239509 + BATUMI_I LTR Pao 1 558 -7405 1 735 1022 0 0 0 chrUextra 19765148 19765265 -9239391 + DMRT1B LINE R1 1865 1981 -3202 1 735 3043 171 15 13 chrUextra 19765365 19766047 -9238609 + SAR_DM Satellite Satellite 248 930 -542 1 735 2136 121 9 19 chrUextra 19766147 19766826 -9237830 - DMSAT6 Satellite Satellite -112 671 1 1 735 2202 49 0 10 chrUextra 19766957 19767248 -9237408 + NINJA_LTR LTR Pao 30 317 0 1 735 1396 73 9 43 chrUextra 19767248 19767611 -9237045 + NINJA_I LTR Pao 1 483 -5528 1 735 5661 9 0 1 chrUextra 19767711 19768393 -9236263 - MDG1_I LTR Gypsy -2710 3886 3206 1 735 1831 97 4 0 chrUextra 19768493 19768772 -9235884 - STALKER4_I LTR Gypsy -530 6000 5721 1 735 3261 22 0 0 chrUextra 19768768 19769173 -9235483 - STALKER4_I LTR Gypsy -1330 5200 4796 1 735 3075 167 8 9 chrUextra 19769275 19769939 -9234717 + SAR_DM Satellite Satellite 414 1076 -396 1 735 2213 15 3 7 chrUextra 19770057 19770739 -9233917 + HETRP_DM Satellite Satellite 1 679 -1284 1 735 181 77 0 71 chrUextra 19770988 19771030 -9233626 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 735 22 35 0 0 chrUextra 19771063 19771092 -9233564 + AT_rich Low_complexity Low_complexity 1 29 0 1 735 490 299 34 26 chrUextra 19771150 19771415 -9233241 + IDEFIX_I LTR Gypsy 2541 2807 -2821 1 735 5777 1 0 0 chrUextra 19771621 19772303 -9232353 - ROO_I LTR Pao -4832 3424 2743 1 735 1665 0 10 5 chrUextra 19772403 19772609 -9232047 + LSU-rRNA_Dme rRNA rRNA 1582 1788 -2112 1 735 3761 5 0 0 chrUextra 19772653 19773085 -9231571 + LSU-rRNA_Dme rRNA rRNA 1788 2219 -1681 1 735 3028 166 16 10 chrUextra 19773971 19774646 -9230010 + SAR_DM Satellite Satellite 369 1047 -425 1 735 379 22 0 0 chrUextra 19774749 19774794 -9229862 - LSU-rRNA_Dme rRNA rRNA -1216 2684 2640 1 735 4815 2 0 2 chrUextra 19774792 19775350 -9229306 - R1_DM LINE R1 0 5356 4800 1 735 751 11 0 0 chrUextra 19775343 19775431 -9229225 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2568 1 735 558 0 0 0 chrUextra 19775531 19775593 -9229063 + (TTGTG)n Simple_repeat Simple_repeat 4 65 0 1 735 980 153 5 0 chrUextra 19776313 19776502 -9228154 - SAR_DM Satellite Satellite -603 869 680 1 735 2178 172 15 6 chrUextra 19776518 19776993 -9227663 - SAR_DM Satellite Satellite -569 903 425 1 735 5876 1 3 1 chrUextra 19777095 19777777 -9226879 + LSU-rRNA_Dme rRNA rRNA 2558 3240 -660 1 735 2529 256 0 4 chrUextra 19777877 19778557 -9226099 - G2_DM LINE Jockey -1238 1864 1188 1 735 2356 91 12 45 chrUextra 19778663 19779334 -9225322 - DMSAT6 Satellite Satellite -75 648 1 1 735 3065 174 10 7 chrUextra 19779441 19780117 -9224539 + SAR_DM Satellite Satellite 384 1061 -411 1 735 2081 0 0 0 chrUextra 19780223 19780460 -9224196 + Invader2_LTR LTR Gypsy 30 266 0 1 735 3517 14 0 0 chrUextra 19780460 19780905 -9223751 + Invader2_I LTR Gypsy 1 445 -4147 1 735 1811 66 16 0 chrUextra 19781005 19781263 -9223393 - R1_DM LINE R1 -5094 262 1 1 735 943 35 0 0 chrUextra 19781296 19781410 -9223246 - R1_DM LINE R1 0 5356 5243 1 735 2285 14 4 0 chrUextra 19781407 19781684 -9222972 - R1_DM LINE R1 -290 5066 4789 1 735 3283 16 85 0 chrUextra 19781787 19782469 -9222187 - NINJA_I LTR Pao -2052 3959 3220 1 735 1317 123 61 4 chrUextra 19782989 19783251 -9221405 + DNAREP1_DM LINE Penelope 1 277 -317 1 735 224 185 31 0 chrUextra 19783796 19783861 -9220795 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 735 4590 86 72 13 chrUextra 19784133 19784815 -9219841 + Gypsy12_I LTR Gypsy 4677 5398 -148 1 735 1244 0 0 0 chrUextra 19784915 19785056 -9219600 + LSU-rRNA_Dme rRNA rRNA 2437 2577 -1323 1 735 4714 7 0 0 chrUextra 19785054 19785597 -9219059 + R2_DM LINE R2 2257 2799 -808 1 735 2909 176 12 10 chrUextra 19785697 19786379 -9218277 - SAR_DM Satellite Satellite -489 983 301 1 735 5641 1 0 1 chrUextra 19786479 19787161 -9217495 - BLOOD_I LTR Gypsy -296 6317 5637 1 735 2864 178 31 12 chrUextra 19788048 19788725 -9215931 + SAR_DM Satellite Satellite 230 919 -553 1 735 21 36 0 0 chrUextra 19789469 19789497 -9215159 + AT_rich Low_complexity Low_complexity 1 28 0 1 735 5739 9 1 1 chrUextra 19789607 19790289 -9214367 + R1_DM LINE R1 3811 4492 -864 1 735 2428 101 35 9 chrUextra 19790396 19791071 -9213585 - DMSAT6 Satellite Satellite 0 692 1 1 735 2666 177 12 25 chrUextra 19791174 19791851 -9212805 - SAR_DM Satellite Satellite -353 1119 452 1 736 5080 19 16 22 chrUextra 19791953 19792635 -9212021 - ROO_I LTR Pao -7479 777 100 1 736 5837 0 1 4 chrUextra 19792735 19793417 -9211239 + SSU-rRNA_Dme rRNA rRNA 507 1186 -809 1 736 1915 173 35 0 chrUextra 19793536 19793935 -9210721 - DM176_I LTR Gypsy 0 6420 6008 1 736 687 12 0 0 chrUextra 19794118 19794199 -9210457 - CIRCE LINE Composite -1376 4980 4900 1 736 5419 40 4 0 chrUextra 19794299 19794981 -9209675 + R1_DM LINE R1 1199 1883 -3473 1 736 5892 4 0 0 chrUextra 19795081 19795763 -9208893 + DOC LINE Jockey 3139 3820 -905 1 736 829 29 10 0 chrUextra 19795863 19795967 -9208689 + CIRCE LINE Composite 2810 2914 -3442 1 736 4666 17 9 5 chrUextra 19795968 19796545 -9208111 + CIRCE LINE Composite 3035 3613 -2743 1 736 5816 1 1 4 chrUextra 19796645 19797327 -9207329 + SSU-rRNA_Dme rRNA rRNA 681 1360 -635 1 736 5645 0 1 1 chrUextra 19798209 19798891 -9205765 + ROO_I LTR Pao 741 1422 -6834 1 736 720 148 43 54 chrUextra 19798991 19799177 -9205479 + ROVER-LTR_DM LTR Gypsy 184 367 0 1 736 395 165 13 0 chrUextra 19799177 19799256 -9205400 + ROVER-I_DM LTR Gypsy 1 80 -6504 1 736 180 0 0 0 chrUextra 19799298 19799318 -9205338 + (A)n Simple_repeat Simple_repeat 1 20 0 1 736 679 164 69 50 chrUextra 19799350 19799568 -9205088 + ROVER-I_DM LTR Gypsy 131 352 -6232 1 736 2258 10 13 13 chrUextra 19799773 19800090 -9204566 + STALKER4_I LTR Gypsy 6214 6530 0 1 736 3064 16 0 0 chrUextra 19800090 19800455 -9204201 + STALKER4_LTR LTR Gypsy 1 365 -37 1 736 2567 3 0 0 chrUextra 19800555 19800850 -9203806 + LSU-rRNA_Dme rRNA rRNA 2266 2560 -1340 1 736 3353 2 0 0 chrUextra 19800843 19801237 -9203419 + R2_DM LINE R2 507 900 -2707 1 736 5730 1 4 3 chrUextra 19801344 19802019 -9202637 + LSU-rRNA_Dme rRNA rRNA 962 1637 -2263 1 736 2809 171 15 11 chrUextra 19802147 19802796 -9201860 - SAR_DM Satellite Satellite -396 1076 425 1 736 5512 29 0 0 chrUextra 19802902 19803583 -9201073 - R1_DM LINE R1 -2294 3062 2382 1 736 2777 170 15 28 chrUextra 19803686 19804365 -9200291 - SAR_DM Satellite Satellite -359 1113 444 1 736 5430 13 0 7 chrUextra 19804465 19805147 -9199509 - FW_DM LINE Jockey -1422 3270 2594 1 736 415 222 8 25 chrUextra 19805247 19805367 -9199289 + HETRP_DM Satellite Satellite 1565 1682 -190 1 736 246 32 0 0 chrUextra 19805511 19805542 -9199114 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 736 478 226 7 22 chrUextra 19805542 19805678 -9198978 + HETRP_DM Satellite Satellite 1549 1682 -190 1 736 246 32 0 0 chrUextra 19805822 19805853 -9198803 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 736 271 227 13 13 chrUextra 19805853 19805929 -9198727 + HETRP_DM Satellite Satellite 1549 1624 -248 1 736 5457 28 0 0 chrUextra 19806029 19806711 -9197945 - MDG1_I LTR Gypsy -4030 2566 1885 1 736 976 31 0 0 chrUextra 19806811 19806941 -9197715 - NTS_DM Other Other -73 167 38 1 736 870 9 0 27 chrUextra 19806941 19807053 -9197603 - NTS_DM Other Other -107 133 25 1 736 1252 18 0 6 chrUextra 19807105 19807270 -9197386 - NTS_DM Other Other -39 201 38 1 736 870 9 0 27 chrUextra 19807270 19807382 -9197274 - NTS_DM Other Other -107 133 25 1 736 385 35 0 17 chrUextra 19807434 19807493 -9197163 - NTS_DM Other Other -39 201 144 1 736 2388 178 98 26 chrUextra 19807593 19808275 -9196381 + SAR_DM Satellite Satellite 228 958 -514 1 736 1542 0 10 10 chrUextra 19808376 19808571 -9196085 + LSU-rRNA_Dme rRNA rRNA 1594 1788 -2112 1 736 3862 2 0 0 chrUextra 19808615 19809057 -9195599 + LSU-rRNA_Dme rRNA rRNA 1788 2229 -1671 1 736 5457 29 1 1 chrUextra 19809157 19809839 -9194817 + NINJA_I LTR Pao 4572 5253 -758 1 736 2237 11 0 0 chrUextra 19809939 19810209 -9194447 - STALKER4_I LTR Gypsy -3396 3134 2865 1 736 3357 15 0 0 chrUextra 19810214 19810621 -9194035 - STALKER4_I LTR Gypsy -3795 2735 2329 1 736 5723 16 0 0 chrUextra 19810721 19811403 -9193253 + FW_DM LINE Jockey 3864 4545 -147 1 736 393 140 342 0 chrUextra 19811571 19811685 -9192971 + FB4_DM DNA Tc1 3937 4089 0 1 736 372 186 157 0 chrUextra 19811763 19811865 -9192791 - PROTOP DNA P -2895 1585 1468 1 736 241 262 0 48 chrUextra 19811856 19811940 -9192716 - PROTOP DNA P -3950 530 451 1 736 1418 63 44 0 chrUextra 19811979 19812185 -9192471 - PROTOP DNA P -4178 302 88 1 736 5766 12 0 0 chrUextra 19812285 19812967 -9191689 + R1_DM LINE R1 4361 5042 -314 1 736 5807 16 0 1 chrUextra 19813067 19813749 -9190907 - R2_DM LINE R2 -1380 2227 1547 1 736 5844 1 1 1 chrUextra 19814631 19815313 -9189343 + R1_DM LINE R1 4588 5269 -87 1 736 21 89 0 0 chrUextra 19816006 19816062 -9188594 + AT_rich Low_complexity Low_complexity 1 56 0 1 736 2931 174 12 9 chrUextra 19816207 19816876 -9187780 + SAR_DM Satellite Satellite 192 862 -610 1 736 695 0 0 0 chrUextra 19816977 19817056 -9187600 - MAX_I LTR Pao -7835 79 1 1 736 2705 16 0 0 chrUextra 19817056 19817377 -9187279 - MAX_LTR LTR Pao 0 321 1 1 736 1415 46 0 8 chrUextra 19817383 19817644 -9187012 + (TATAA)n Simple_repeat Simple_repeat 1 258 0 1 736 2340 101 15 32 chrUextra 19817759 19818435 -9186221 + DMSAT6 Satellite Satellite 1 664 -74 1 736 5608 12 9 0 chrUextra 19818541 19819223 -9185433 - FW_DM LINE Jockey -1689 3003 2316 1 736 3102 0 6 0 chrUextra 19819323 19819681 -9184975 + SSU-rRNA_Dme rRNA rRNA 1636 1995 0 1 736 21 89 0 0 chrUextra 19819700 19819756 -9184900 + AT_rich Low_complexity Low_complexity 1 56 0 1 736 5566 15 6 4 chrUextra 19820105 19820787 -9183869 - MICROPIA_I LTR Gypsy -214 4262 3580 1 736 2163 80 77 30 chrUextra 19820920 19821055 -9183601 + ACCORD2_I LTR Gypsy 6825 6977 -235 1 736 185 0 40 0 chrUextra 19821055 19821080 -9183576 + (TAA)n Simple_repeat Simple_repeat 1 26 0 1 736 2163 80 77 30 chrUextra 19821080 19821305 -9183351 + ACCORD2_I LTR Gypsy 6978 7201 -11 1 736 519 218 61 79 chrUextra 19821305 19821519 -9183137 + ACCORD2_LTR LTR Gypsy 1 210 -5 1 736 823 27 0 0 chrUextra 19822238 19822349 -9182307 - ALUII_DM Unknown Unknown 0 240 130 1 736 875 0 10 0 chrUextra 19822451 19822554 -9182102 - QUASIMODO_I LTR Gypsy -5956 104 1 1 736 4840 10 0 3 chrUextra 19822554 19823132 -9181524 - QUASIMODO_LTR LTR Gypsy 0 658 83 1 736 3106 169 9 9 chrUextra 19823233 19823912 -9180744 + SAR_DM Satellite Satellite 369 1047 -425 1 736 5689 15 1 0 chrUextra 19824015 19824697 -9179959 - STALKER4_I LTR Gypsy -1692 4838 4156 1 736 2957 172 12 12 chrUextra 19824797 19825478 -9179178 + SAR_DM Satellite Satellite 346 1026 -446 1 736 5702 6 3 1 chrUextra 19825578 19826259 -9178397 + R1_DM LINE R1 3263 3944 -1412 1 736 4539 5 4 9 chrUextra 19826359 19826918 -9177738 + DOC LINE Jockey 4166 4721 -4 1 736 1363 65 35 0 chrUextra 19827434 19827634 -9177022 + TC1_DM DNA Tc1 1 207 -1459 1 736 1216 86 143 0 chrUextra 19827612 19827821 -9176835 + TC1_DM DNA Tc1 1083 1321 -345 1 736 4980 2 0 7 chrUextra 19827921 19828497 -9176159 - SSU-rRNA_Dme rRNA rRNA -1423 572 1 1 736 5752 3 0 0 chrUextra 19828702 19829383 -9175273 + LSU-rRNA_Dme rRNA rRNA 400 1080 -2820 1 736 3978 15 0 0 chrUextra 19829483 19829954 -9174702 - R1_DM LINE R1 -860 4496 4026 1 736 1579 15 0 25 chrUextra 19829964 19830164 -9174492 - R1_DM LINE R1 -1690 3666 3472 1 736 4254 27 5 43 chrUextra 19830314 19830937 -9173719 + DOC5_DM LINE Jockey 3979 4577 -105 1 736 34 24 0 0 chrUextra 19831646 19831687 -9172969 + AT_rich Low_complexity Low_complexity 1 41 0 1 736 2223 77 23 40 chrUextra 19831826 19832344 -9172312 - NINJA_I LTR Pao -5544 467 1 1 736 983 67 6 80 chrUextra 19832344 19832507 -9172149 - NINJA_LTR LTR Pao 0 317 167 1 736 1116 15 0 7 chrUextra 19832636 19832772 -9171884 - 5S_DM RNA RNA 0 135 1 1 736 1167 7 0 0 chrUextra 19833020 19833155 -9171501 - 5S_DM RNA RNA 0 135 1 1 736 37 39 0 0 chrUextra 19833660 19833711 -9170945 + AT_rich Low_complexity Low_complexity 1 51 0 1 736 22 35 0 0 chrUextra 19833812 19833841 -9170815 + AT_rich Low_complexity Low_complexity 1 29 0 1 736 689 120 0 0 chrUextra 19834169 19834286 -9170370 - ARS406_DM Unknown Unknown -236 117 1 1 736 2813 179 12 8 chrUextra 19834193 19834848 -9169808 + SAR_DM Satellite Satellite 195 852 -620 1 736 2900 164 33 16 chrUextra 19834956 19835624 -9169032 - SAR_DM Satellite Satellite -425 1047 369 1 736 2873 19 3 16 chrUextra 19835731 19836101 -9168555 + BATUMI_I LTR Pao 6637 7001 -962 1 736 2456 7 0 0 chrUextra 19836127 19836412 -9168244 - BATUMI_I LTR Pao -1543 6420 6136 1 736 5733 9 6 6 chrUextra 19836512 19837193 -9167463 + MICROPIA_I LTR Gypsy 2964 3644 -832 1 736 5686 0 0 0 chrUextra 19838074 19838755 -9165901 - ROO_I LTR Pao -2951 5305 4625 1 736 1858 176 91 43 chrUextra 19838859 19839536 -9165120 + HETA LINE telomeric 4919 5394 -687 1 736 2831 170 16 26 chrUextra 19840417 19841098 -9163558 + SAR_DM Satellite Satellite 428 1101 -371 1 736 2863 175 24 12 chrUextra 19841198 19841879 -9162777 + SAR_DM Satellite Satellite 334 1022 -450 1 736 5413 4 9 3 chrUextra 19841979 19842660 -9161996 + QUASIMODO_I LTR Gypsy 4302 4986 -1074 1 736 201 74 0 0 chrUextra 19842789 19842816 -9161840 + (A)n Simple_repeat Simple_repeat 1 27 0 1 736 229 114 0 22 chrUextra 19842841 19842886 -9161770 + ROVER-I_DM LTR Gypsy 151 194 -6390 1 736 2295 4 0 0 chrUextra 19842923 19843190 -9161466 - MDG3_LTR LTR Gypsy 0 267 1 1 736 1193 0 0 0 chrUextra 19843190 19843330 -9161326 - MDG3_I LTR Gypsy 0 4986 4847 1 736 999 43 0 21 chrUextra 19843300 19843441 -9161215 - MDG3_I LTR Gypsy -2011 2975 2838 1 736 3032 105 60 33 chrUextra 19843545 19844222 -9160434 + STALKER4_I LTR Gypsy 415 1237 -5293 1 736 306 0 0 0 chrUextra 19844530 19844564 -9160092 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1 736 186 43 0 0 chrUextra 19844697 19844720 -9159936 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1 736 26 0 0 0 chrUextra 19844848 19844874 -9159782 + AT_rich Low_complexity Low_complexity 1 26 0 1 736 2676 233 13 4 chrUextra 19845104 19845784 -9158872 + TABOR_I LTR Gypsy 4057 4742 -1594 1 736 640 0 0 0 chrUextra 19845884 19845959 -9158697 - LSU-rRNA_Dme rRNA rRNA -3825 75 1 1 736 21 95 0 0 chrUextra 19845971 19846034 -9158622 + AT_rich Low_complexity Low_complexity 1 63 0 1 736 34 24 0 0 chrUextra 19846247 19846288 -9158368 + AT_rich Low_complexity Low_complexity 1 41 0 1 736 5349 0 1 38 chrUextra 19846665 19847346 -9157310 + LSU-rRNA_Dme rRNA rRNA 111 766 -3134 1 736 1546 31 0 15 chrUextra 19847446 19847643 -9157013 + PROTOP DNA P 4287 4480 0 1 736 26 30 0 0 chrUextra 19847995 19848028 -9156628 + AT_rich Low_complexity Low_complexity 1 33 0 1 736 23 68 0 0 chrUextra 19848074 19848118 -9156538 + AT_rich Low_complexity Low_complexity 1 44 0 1 736 3164 159 9 11 chrUextra 19849023 19849689 -9154967 + SAR_DM Satellite Satellite 369 1033 -439 1 736 3163 0 0 63 chrUextra 19849792 19850207 -9154449 - LSU-rRNA_Dme rRNA rRNA -3511 389 1 1 736 21 95 0 0 chrUextra 19850219 19850282 -9154374 + AT_rich Low_complexity Low_complexity 1 63 0 1 736 1167 7 0 0 chrUextra 19850741 19850876 -9153780 + 5S_DM RNA RNA 1 135 0 1 736 1068 16 0 8 chrUextra 19851121 19851251 -9153405 + 5S_DM RNA RNA 1 129 -6 1 736 5667 12 0 4 chrUextra 19851351 19852032 -9152624 - STALKER4_I LTR Gypsy -1591 4939 4262 1 736 2734 198 9 7 chrUextra 19852134 19852810 -9151846 + SAR_DM Satellite Satellite 282 958 -514 1 736 819 98 11 69 chrUextra 19852917 19853136 -9151520 - Gypsy12_I LTR Gypsy -4826 720 457 1 736 502 60 0 0 chrUextra 19853136 19853203 -9151453 - Gypsy12_I LTR Gypsy -4117 1429 1363 1 736 1385 115 5 58 chrUextra 19853205 19853594 -9151062 - Gypsy12_I LTR Gypsy -4751 795 370 1 736 5964 1 0 0 chrUextra 19853694 19854375 -9150281 + BS2 LINE Jockey 3560 4240 -481 1 736 2889 172 12 9 chrUextra 19854475 19855139 -9149517 + SAR_DM Satellite Satellite 411 1076 -396 1 736 2878 183 6 18 chrUextra 19855259 19855937 -9148719 - SAR_DM Satellite Satellite -361 1111 442 1 736 717 22 0 0 chrUextra 19856038 19856127 -9148529 - MAX_LTR LTR Pao -232 89 1 1 736 4027 45 0 0 chrUextra 19856133 19856665 -9147991 - MAX_I LTR Pao -2 7912 7381 1 736 2739 19 0 0 chrUextra 19856820 19857143 -9147513 - LSU-rRNA_Dme rRNA rRNA -1790 2110 1788 1 736 2518 6 16 3 chrUextra 19857187 19857499 -9147157 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1473 1 736 3287 0 0 0 chrUextra 19857599 19857980 -9146676 - ACCORD_LTR LTR Gypsy -177 381 1 1 736 2432 26 3 16 chrUextra 19857980 19858280 -9146376 - R1_DM LINE R1 -2231 3125 2830 1 736 5799 3 0 0 chrUextra 19858380 19859061 -9145595 + QUASIMODO_I LTR Gypsy 1975 2655 -3405 1 736 418 18 0 0 chrUextra 19859942 19859998 -9144658 + NTS_DM Other Other 78 133 -107 1 736 1239 24 0 6 chrUextra 19859998 19860163 -9144493 + NTS_DM Other Other 38 201 -39 1 736 870 9 0 27 chrUextra 19860215 19860327 -9144329 + NTS_DM Other Other 25 133 -107 1 736 1222 18 0 12 chrUextra 19860327 19860493 -9144163 + NTS_DM Other Other 38 201 -39 1 736 600 13 0 39 chrUextra 19860545 19860623 -9144033 + NTS_DM Other Other 25 99 -141 1 736 362 198 0 19 chrUextra 19860723 19860826 -9143830 + XDMR_DM Unknown Unknown 260 360 0 1 736 2706 175 18 23 chrUextra 19860739 19861404 -9143252 - SAR_DM Satellite Satellite -353 1119 458 1 736 5763 1 1 6 chrUextra 19861504 19862185 -9142471 - LSU-rRNA_Dme rRNA rRNA -2263 1637 960 1 736 772 19 18 28 chrUextra 19863066 19863175 -9141481 - NTS_DM Other Other -108 132 25 1 736 21 57 0 0 chrUextra 19863201 19863236 -9141420 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 1252 18 0 6 chrUextra 19863236 19863401 -9141255 - NTS_DM Other Other -39 201 38 1 736 852 18 0 27 chrUextra 19863401 19863513 -9141143 - NTS_DM Other Other -107 133 25 1 736 1252 18 0 6 chrUextra 19863565 19863730 -9140926 - NTS_DM Other Other -39 201 38 1 736 5527 0 0 1 chrUextra 19863847 19864528 -9140128 - TIRANT_I LTR Gypsy -635 7057 6378 1 736 689 33 0 11 chrUextra 19864628 19864721 -9139935 + NTS_DM Other Other 42 133 -107 1 736 1252 18 0 6 chrUextra 19864721 19864886 -9139770 + NTS_DM Other Other 38 201 -39 1 736 870 9 0 27 chrUextra 19864938 19865050 -9139606 + NTS_DM Other Other 25 133 -107 1 736 1252 18 0 6 chrUextra 19865050 19865215 -9139441 + NTS_DM Other Other 38 201 -39 1 736 21 57 0 0 chrUextra 19865215 19865250 -9139406 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 2684 0 0 3 chrUextra 19865409 19865721 -9138935 + LSU-rRNA_Dme rRNA rRNA 3590 3900 0 1 736 22 56 0 0 chrUextra 19865793 19865829 -9138827 + AT_rich Low_complexity Low_complexity 1 36 0 1 736 246 150 0 0 chrUextra 19865834 19865874 -9138782 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 736 246 150 0 0 chrUextra 19865926 19865966 -9138690 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 736 246 150 0 0 chrUextra 19866018 19866058 -9138598 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 736 5440 34 1 3 chrUextra 19866190 19866871 -9137785 - R1_DM LINE R1 -172 5184 4505 1 736 539 30 0 0 chrUextra 19866990 19867056 -9137600 + NINJA_I LTR Pao 4448 4513 -1498 1 736 4768 24 2 2 chrUextra 19867064 19867652 -9137004 + NINJA_I LTR Pao 4778 5365 -646 1 736 28 0 0 0 chrUextra 19868020 19868048 -9136608 + AT_rich Low_complexity Low_complexity 1 28 0 1 736 5532 28 1 1 chrUextra 19868533 19869214 -9135442 - R1_DM LINE R1 -353 5003 4323 1 736 1613 171 8 11 chrUextra 19869314 19869669 -9134987 - SAR_DM Satellite Satellite -487 985 632 1 736 2691 3 3 0 chrUextra 19869668 19869995 -9134661 - FW_DM LINE Jockey 0 4692 4365 1 736 5945 1 0 0 chrUextra 19870096 19870776 -9133880 + LSU-rRNA_Dme rRNA rRNA 2142 2821 -1079 1 736 5659 6 0 0 chrUextra 19870876 19871557 -9133099 + QUASIMODO_I LTR Gypsy 842 1522 -4538 1 736 2406 196 74 13 chrUextra 19871661 19872333 -9132323 - SAR_DM Satellite Satellite -224 1248 536 1 736 3111 164 9 9 chrUextra 19872449 19873118 -9131538 + SAR_DM Satellite Satellite 369 1037 -435 1 736 2088 124 6 28 chrUextra 19873221 19873872 -9130784 - DMSAT6 Satellite Satellite -61 637 1 1 736 3197 44 9 11 chrUextra 19874000 19874441 -9130215 - BATUMI_I LTR Pao -1097 6866 6427 1 736 1471 56 0 5 chrUextra 19874464 19874681 -9129975 + BATUMI_I LTR Pao 7303 7518 -445 1 736 22 56 0 0 chrUextra 19875221 19875257 -9129399 + AT_rich Low_complexity Low_complexity 1 36 0 1 736 5602 25 0 0 chrUextra 19875562 19876243 -9128413 + R1_DM LINE R1 2185 2865 -2491 1 736 1140 199 3 10 chrUextra 19876343 19876638 -9128018 - SAR_DM Satellite Satellite -684 788 496 1 736 1720 169 5 8 chrUextra 19876653 19877022 -9127634 - SAR_DM Satellite Satellite -569 903 536 1 736 3319 143 110 33 chrUextra 19877124 19877797 -9126859 + Gypsy3_I LTR Gypsy 4220 4944 -1233 1 736 5769 15 0 4 chrUextra 19877905 19878586 -9126070 - BATUMI_I LTR Pao -1939 6024 5347 1 736 488 119 36 0 chrUextra 19878894 19878978 -9125678 - NTS_DM Other Other -150 90 4 1 736 1290 6 0 18 chrUextra 19879088 19879253 -9125403 - NTS_DM Other Other -78 162 1 1 736 749 9 35 26 chrUextra 19879253 19879367 -9125289 - NTS_DM Other Other 0 240 126 1 736 6009 0 0 0 chrUextra 19879467 19880148 -9124508 - R2_DM LINE R2 -1185 2422 1742 1 736 4142 0 0 0 chrUextra 19880248 19880724 -9123932 - FW_DM LINE Jockey -3548 1144 669 1 736 1843 0 0 0 chrUextra 19880717 19880929 -9123727 + R1_DM LINE R1 5033 5244 -112 1 736 6016 0 0 0 chrUextra 19881029 19881710 -9122946 + R2_DM LINE R2 1818 2498 -1109 1 736 2270 0 11 0 chrUextra 19881810 19882081 -9122575 - R1_DM LINE R1 -5082 274 1 1 736 3550 0 0 2 chrUextra 19882081 19882491 -9122165 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2224 1 736 5917 1 0 0 chrUextra 19882591 19883272 -9121384 - TAHRE LINE telomeric -4919 5544 4864 1 736 5387 10 0 0 chrUextra 19884153 19884834 -9119822 - DM176_I LTR Gypsy -330 6090 5410 1 736 645 13 0 0 chrUextra 19884934 19885009 -9119647 - NTS_DM Other Other -165 75 1 1 736 1408 20 20 20 chrUextra 19885009 19885212 -9119444 - NTS_DM Other Other 0 240 38 1 736 817 0 0 0 chrUextra 19885212 19885308 -9119348 - NTS_DM Other Other -107 133 38 1 736 832 9 9 27 chrUextra 19885308 19885419 -9119237 - NTS_DM Other Other -107 133 25 1 736 21 57 0 0 chrUextra 19885445 19885480 -9119176 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 932 30 0 7 chrUextra 19885480 19885615 -9119041 - NTS_DM Other Other -39 201 68 1 736 5800 1 3 1 chrUextra 19885715 19886396 -9118260 - R1_DM LINE R1 -3269 2087 1406 1 736 5808 1 1 1 chrUextra 19886496 19887177 -9117479 + R1_DM LINE R1 1380 2060 -3296 1 736 5731 7 0 0 chrUextra 19887283 19887958 -9116698 - DMRT1B LINE R1 -281 4902 4228 1 736 1101 0 8 0 chrUextra 19888058 19888191 -9116465 + ROO_I LTR Pao 8123 8256 0 1 736 3931 0 0 0 chrUextra 19888191 19888619 -9116037 + ROO_LTR LTR Pao 1 428 0 1 736 5835 6 15 10 chrUextra 19888839 19889520 -9115136 + FW_DM LINE Jockey 1733 2416 -2276 1 736 5734 19 13 7 chrUextra 19889620 19890300 -9114356 - FW_DM LINE Jockey -2126 2566 1883 1 736 293 50 0 0 chrUextra 19890423 19890483 -9114173 - PROTOP_B DNA P -522 631 572 1 736 3714 70 51 26 chrUextra 19890476 19891082 -9113574 - PROTOP_B DNA P -217 936 316 1 736 1337 111 111 0 chrUextra 19891182 19891398 -9113258 - MAX_LTR LTR Pao -81 240 1 1 736 3642 48 0 0 chrUextra 19891403 19891863 -9112793 - MAX_I LTR Pao -2 7912 7453 1 736 3774 19 8 27 chrUextra 19891963 19892437 -9112219 - ROO_I LTR Pao -7791 465 1 1 736 1721 48 0 0 chrUextra 19892437 19892644 -9112012 - ROO_LTR LTR Pao 0 428 222 1 736 1859 42 0 17 chrUextra 19892744 19892983 -9111673 + DM1731_LTR LTR Copia 101 335 -1 1 736 1620 9 2 5 chrUextra 19892983 19893425 -9111231 + (TTATA)n Simple_repeat Simple_repeat 1 440 0 1 736 3203 162 14 9 chrUextra 19893525 19894185 -9110471 - SAR_DM Satellite Satellite -484 988 326 1 736 5878 19 1 1 chrUextra 19894306 19894987 -9109669 - R1_DM LINE R1 -994 4362 3682 1 736 4046 43 74 14 chrUextra 19895868 19896433 -9108223 + QUASIMODO_I LTR Gypsy 4576 5174 -886 1 736 789 71 32 0 chrUextra 19896423 19896549 -9108107 + QUASIMODO_I LTR Gypsy 5467 5596 -464 1 736 580 35 0 11 chrUextra 19896649 19896737 -9107919 + NTS_DM Other Other 115 201 -39 1 736 907 9 0 27 chrUextra 19896789 19896901 -9107755 + NTS_DM Other Other 25 133 -107 1 736 1304 18 0 6 chrUextra 19896901 19897066 -9107590 + NTS_DM Other Other 38 201 -39 1 736 21 57 0 0 chrUextra 19897066 19897101 -9107555 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 840 9 9 36 chrUextra 19897127 19897239 -9107417 + NTS_DM Other Other 25 133 -107 1 736 809 0 0 0 chrUextra 19897239 19897330 -9107326 + NTS_DM Other Other 38 128 -112 1 736 5794 24 24 0 chrUextra 19897430 19898111 -9106545 - R1_DM LINE R1 -1668 3688 2992 1 736 3680 63 45 0 chrUextra 19899132 19899673 -9104983 - PROTOP_A DNA P 0 1105 570 1 736 2744 269 3 3 chrUextra 19899773 19900454 -9104202 + Gypsy6_I LTR Gypsy 2325 3005 -4007 1 736 1203 0 24 18 chrUextra 19900554 19900718 -9103938 + NTS_DM Other Other 76 240 0 1 736 1926 4 17 13 chrUextra 19900718 19900957 -9103699 + NTS_DM Other Other 1 240 0 1 736 1355 6 0 18 chrUextra 19900957 19901122 -9103534 + NTS_DM Other Other 1 162 -78 1 736 5887 18 1 7 chrUextra 19901335 19902016 -9102640 + BATUMI_I LTR Pao 5624 6300 -1663 1 736 5799 28 0 0 chrUextra 19902116 19902797 -9101859 + R1_DM LINE R1 2569 3249 -2107 1 736 886 10 0 0 chrUextra 19902899 19903001 -9101655 + NTS_DM Other Other 32 133 -107 1 736 1304 18 0 6 chrUextra 19903001 19903166 -9101490 + NTS_DM Other Other 38 201 -39 1 736 889 18 0 27 chrUextra 19903218 19903330 -9101326 + NTS_DM Other Other 25 133 -107 1 736 1304 18 0 6 chrUextra 19903330 19903495 -9101161 + NTS_DM Other Other 38 201 -39 1 736 21 57 0 0 chrUextra 19903495 19903530 -9101126 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 1610 29 0 99 chrUextra 19904730 19904963 -9099693 + DIVER2_I LTR Pao 1366 1575 -2572 1 736 1570 56 15 0 chrUextra 19904940 19905138 -9099518 + DIVER2_I LTR Pao 3719 3919 -228 1 736 1723 169 19 92 chrUextra 19905391 19905814 -9098842 - Gypsy3_LTR LTR Gypsy -6 392 1 1 736 972 0 0 0 chrUextra 19905814 19905921 -9098735 - Invader3_I LTR Gypsy -4096 792 686 1 736 1820 172 6 7 chrUextra 19906021 19906701 -9097955 - SAR_DM Satellite Satellite -602 678 1 1 736 1798 17 21 17 chrUextra 19906820 19907059 -9097597 - NTS_DM Other Other 0 240 1 1 736 1813 21 17 17 chrUextra 19907059 19907299 -9097357 - NTS_DM Other Other 0 240 1 1 736 1257 22 22 22 chrUextra 19907299 19907483 -9097173 - NTS_DM Other Other 0 240 57 1 736 1609 57 108 0 chrUextra 19907583 19908016 -9096640 - PROTOP_A DNA P -239 866 520 1 736 1841 49 0 0 chrUextra 19908003 19908229 -9096427 - PROTOP_A DNA P -806 299 74 1 736 5992 12 1 0 chrUextra 19908364 19909045 -9095611 - R1_DM LINE R1 -3070 2286 1605 1 736 6010 3 0 1 chrUextra 19909145 19909807 -9094849 - LSU-rRNA_Dme rRNA rRNA -662 3238 2578 1 736 6106 0 0 3 chrUextra 19909928 19910607 -9094049 + ROO_I LTR Pao 2183 2859 -5397 1 736 701 308 53 40 chrUextra 19910979 19911383 -9093273 - GTWIN_I LTR Gypsy -2812 3609 2969 1 736 678 125 0 0 chrUextra 19911488 19911600 -9093056 - ARS406_DM Unknown Unknown -241 112 1 1 736 3071 184 6 8 chrUextra 19911507 19912166 -9092490 + SAR_DM Satellite Satellite 195 852 -620 1 736 6204 3 0 0 chrUextra 19912269 19912950 -9091706 + LSU-rRNA_Dme rRNA rRNA 1943 2623 -1277 1 736 6037 1 1 1 chrUextra 19913050 19913731 -9090925 - R1_DM LINE R1 -3680 1676 996 1 736 5062 0 0 0 chrUextra 19913831 19914386 -9090270 + R1_DM LINE R1 4802 5356 0 1 736 1156 8 0 0 chrUextra 19914384 19914512 -9090144 + LSU-rRNA_Dme rRNA rRNA 2640 2767 -1133 1 736 4894 6 0 0 chrUextra 19914612 19915153 -9089503 - LSU-rRNA_Dme rRNA rRNA -1572 2328 1788 1 736 820 0 0 10 chrUextra 19915197 19915293 -9089363 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1694 1 736 3356 162 10 9 chrUextra 19915395 19916072 -9088584 - SAR_DM Satellite Satellite -416 1056 379 1 736 5746 0 21 0 chrUextra 19916179 19916855 -9087801 + ROO_I LTR Pao 397 1086 -7170 1 736 4258 4 0 0 chrUextra 19916955 19917428 -9087228 - QUASIMODO_LTR LTR Gypsy -62 596 124 1 736 305 274 43 43 chrUextra 19917491 19917632 -9087024 + MICROPIA_I LTR Gypsy 1972 2112 -2364 1 736 5886 28 0 0 chrUextra 19917736 19918417 -9086239 + R1_DM LINE R1 1941 2621 -2735 1 736 28 48 0 0 chrUextra 19918671 19918713 -9085943 + AT_rich Low_complexity Low_complexity 1 42 0 1 736 32 0 0 0 chrUextra 19919042 19919074 -9085582 + AT_rich Low_complexity Low_complexity 1 32 0 1 736 405 0 20 0 chrUextra 19919298 19919347 -9085309 + R1_DM LINE R1 4233 4282 -1074 1 736 5155 25 3 3 chrUextra 19919367 19919979 -9084677 + R1_DM LINE R1 4407 5018 -338 1 736 2757 0 0 3 chrUextra 19920860 19921172 -9083484 + HMSBEAGLE_I LTR Gypsy 6219 6529 0 1 736 2421 8 0 0 chrUextra 19921172 19921438 -9083218 + DMLTR5 LTR Gypsy 1 266 0 1 736 675 117 0 0 chrUextra 19921438 19921541 -9083115 + (TA)n Simple_repeat Simple_repeat 2 104 0 1 736 697 138 0 0 chrUextra 19921641 19921750 -9082906 - NTS_DM Other Other -131 109 1 1 736 230 189 18 36 chrUextra 19921822 19921877 -9082779 - NTS_DM Other Other -186 54 1 1 736 1131 128 0 5 chrUextra 19921967 19922164 -9082492 - NTS_DM Other Other -44 196 1 1 736 317 85 21 0 chrUextra 19922256 19922303 -9082353 - NTS_DM Other Other -192 48 1 1 736 25 0 0 0 chrUextra 19922632 19922657 -9081999 + AT_rich Low_complexity Low_complexity 1 25 0 1 737 591 0 0 0 chrUextra 19923038 19923103 -9081553 + IDEFIX_I LTR Gypsy 1 65 -5563 1 737 6146 1 1 0 chrUextra 19923203 19923883 -9080773 - LSU-rRNA_Dme rRNA rRNA -896 3004 2324 1 737 5915 1 0 0 chrUextra 19923984 19924665 -9079991 + ROO_I LTR Pao 2837 3517 -4739 1 737 2946 219 18 7 chrUextra 19924766 19925446 -9079210 - TABOR_I LTR Gypsy -1560 4776 4090 1 737 393 0 0 0 chrUextra 19925546 19925589 -9079067 + Jockey2 LINE Jockey 1778 1820 -1608 1 737 2352 53 285 5 chrUextra 19925597 19926093 -9078563 - PROTOP_B DNA P -297 856 176 1 737 372 256 21 35 chrUextra 19926085 19926227 -9078429 + QUASIMODO_I LTR Gypsy 5527 5666 -394 1 737 6109 0 0 3 chrUextra 19926327 19927008 -9077648 + FW_DM LINE Jockey 3207 3885 -807 1 737 3239 166 10 10 chrUextra 19927115 19927789 -9076867 + SAR_DM Satellite Satellite 332 1005 -467 1 737 3185 171 14 8 chrUextra 19927890 19928542 -9076114 - SAR_DM Satellite Satellite -571 901 246 1 737 383 118 15 0 chrUextra 19928502 19928570 -9076086 + ARS406_DM Unknown Unknown 1 69 -284 1 737 5716 31 4 0 chrUextra 19928670 19929351 -9075305 - R1_DM LINE R1 -248 5108 4425 1 737 5508 31 1 15 chrUextra 19929451 19930132 -9074524 - FW_DM LINE Jockey -2820 1872 1201 1 737 2065 0 0 0 chrUextra 19930232 19930457 -9074199 - LSU-rRNA_Dme rRNA rRNA -1888 2012 1788 1 737 3607 0 5 5 chrUextra 19930501 19930913 -9073743 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1377 1 737 2156 122 20 3 chrUextra 19931341 19931694 -9072962 + DMRT1C LINE R1 3743 4101 -1342 1 737 2788 178 21 22 chrUextra 19931805 19932471 -9072185 + SAR_DM Satellite Satellite 227 891 -581 1 737 3051 187 8 8 chrUextra 19932575 19933242 -9071414 + SAR_DM Satellite Satellite 410 1076 -396 1 737 1668 180 58 18 chrUextra 19933356 19934037 -9070619 + SAR_DM Satellite Satellite 1 708 -225 1 737 3126 177 10 12 chrUextra 19934138 19934813 -9069843 - SAR_DM Satellite Satellite -478 994 321 1 737 284 194 16 0 chrUextra 19934918 19934980 -9069676 + XDMR Unknown Unknown 299 361 0 1 737 2771 184 15 28 chrUextra 19934926 19935599 -9069057 - SAR_DM Satellite Satellite -353 1119 456 1 737 2388 172 99 24 chrUextra 19935699 19936379 -9068277 - TART LINE telomeric -4751 9726 9040 1 737 2402 104 33 16 chrUextra 19936489 19937157 -9067499 + DMSAT6 Satellite Satellite 1 678 -1 1 737 3276 181 6 6 chrUextra 19937261 19937940 -9066716 - SAR_DM Satellite Satellite -442 1030 352 1 737 2823 202 23 5 chrUextra 19938042 19938704 -9065952 + SAR_DM Satellite Satellite 403 1076 -396 1 737 3647 0 0 0 chrUextra 19938823 19939221 -9065435 + R2_DM LINE R2 3201 3598 -9 1 737 2558 11 3 0 chrUextra 19939217 19939504 -9065152 + LSU-rRNA_Dme rRNA rRNA 2578 2865 -1035 1 737 2401 173 6 10 chrUextra 19939618 19940115 -9064541 + SAR_DM Satellite Satellite 500 994 -478 1 737 1295 6 0 0 chrUextra 19940119 19940285 -9064371 - DOC LINE Jockey 0 4725 4560 1 737 2881 181 12 25 chrUextra 19940386 19941060 -9063596 + SAR_DM Satellite Satellite 456 1120 -352 1 737 6001 0 0 1 chrUextra 19941166 19941847 -9062809 - ROO_I LTR Pao -4836 3420 2741 1 737 2861 181 13 27 chrUextra 19941949 19942625 -9062031 + SAR_DM Satellite Satellite 452 1118 -354 1 737 1937 188 48 12 chrUextra 19942728 19943404 -9061252 - SAR_DM Satellite Satellite -444 700 1 1 737 5094 20 0 0 chrUextra 19943510 19944112 -9060544 + PROTOP_A DNA P 504 1105 0 1 737 598 51 0 0 chrUextra 19944112 19944190 -9060466 + PROTOP_A DNA P 420 497 -608 1 737 2886 181 18 7 chrUextra 19944292 19944971 -9059685 - SAR_DM Satellite Satellite -549 923 238 1 737 28 0 0 0 chrUextra 19945071 19945099 -9059557 + AT_rich Low_complexity Low_complexity 1 28 0 1 737 480 0 0 130 chrUextra 19945099 19945283 -9059373 + (TTA)n Simple_repeat Simple_repeat 2 161 0 1 737 4072 4 0 0 chrUextra 19945284 19945752 -9058904 + BS2 LINE Jockey 2292 2759 -1962 1 737 2935 185 10 7 chrUextra 19945852 19946533 -9058123 + SAR_DM Satellite Satellite 335 1017 -455 1 737 5622 26 1 0 chrUextra 19947414 19948095 -9056561 + R1_DM LINE R1 4121 4802 -554 1 737 2110 124 3 28 chrUextra 19948195 19948876 -9055780 - DMSAT6 Satellite Satellite -32 663 1 1 737 794 30 0 0 chrUextra 19948976 19949075 -9055581 + DMCR1A LINE CR1 2502 2600 -1870 1 737 3717 101 10 10 chrUextra 19949075 19949656 -9055000 + DMCR1A LINE CR1 2823 3403 -1067 1 737 2841 185 16 10 chrUextra 19949757 19950435 -9054221 + SAR_DM Satellite Satellite 380 1061 -411 1 737 849 81 3 18 chrUextra 19950556 19951219 -9053437 + RSP Satellite Satellite 1 653 0 1 737 811 88 0 0 chrUextra 19951319 19951444 -9053212 - ARS406_DM Unknown Unknown -228 125 1 1 737 3234 241 33 12 chrUextra 19951348 19952771 -9051885 + SAR_DM Satellite Satellite 1 1453 -208 1 737 2663 243 56 27 chrUextra 19952881 19954342 -9050314 + SAR_DM Satellite Satellite 1 1503 -227 1 737 885 0 0 18 chrUextra 19954443 19954557 -9050099 + BATUMI_I LTR Pao 7852 7963 0 1 737 1394 46 0 39 chrUextra 19954557 19954754 -9049902 + BATUMI_I LTR Pao 7002 7190 -773 1 737 2232 38 7 7 chrUextra 19954754 19955048 -9049608 - ZAM_LTR LTR Gypsy 0 472 179 1 737 591 68 11 0 chrUextra 19955036 19955124 -9049532 - ZAM_LTR LTR Gypsy -248 224 136 1 737 5953 0 1 0 chrUextra 19955224 19955905 -9048751 - LSU-rRNA_Dme rRNA rRNA -645 3255 2574 1 737 2847 174 19 15 chrUextra 19956005 19956674 -9047982 - SAR_DM Satellite Satellite -480 992 321 1 737 942 110 6 12 chrUextra 19956786 19956951 -9047705 + SAR_DM Satellite Satellite 740 903 -569 1 737 2296 179 4 6 chrUextra 19956966 19957466 -9047190 + SAR_DM Satellite Satellite 496 994 -478 1 737 2160 81 2 45 chrUextra 19957594 19958240 -9046416 - DMSAT6 Satellite Satellite -3 617 1 1 737 5833 9 7 0 chrUextra 19958348 19959029 -9045627 - Gypsy6_I LTR Gypsy -1412 5600 4915 1 737 5933 0 0 1 chrUextra 19959129 19959810 -9044846 + LSU-rRNA_Dme rRNA rRNA 2265 2944 -956 1 737 246 150 0 0 chrUextra 19959910 19959950 -9044706 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 22 56 0 0 chrUextra 19959955 19959991 -9044665 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 27 29 0 0 chrUextra 19960055 19960089 -9044567 + AT_rich Low_complexity Low_complexity 1 34 0 1 737 3717 2 5 0 chrUextra 19960161 19960591 -9044065 - LSU-rRNA_Dme rRNA rRNA 0 3900 3469 1 737 4702 55 102 6 chrUextra 19960691 19961370 -9043286 + BATUMI_I LTR Pao 1201 1944 -6019 1 737 5814 7 0 1 chrUextra 19961472 19962153 -9042503 - R1_DM LINE R1 -462 4894 4215 1 737 285 282 107 89 chrUextra 19962606 19962886 -9041770 - Invader1_LTR LTR Gypsy -55 368 84 1 737 5292 19 18 0 chrUextra 19963034 19963715 -9040941 - Invader2_I LTR Gypsy -3876 716 24 1 737 2505 76 15 34 chrUextra 19963820 19964491 -9040165 - DMSAT6 Satellite Satellite -64 657 1 1 737 2956 179 13 6 chrUextra 19964599 19965272 -9039384 - SAR_DM Satellite Satellite -549 923 246 1 737 225 156 0 0 chrUextra 19965232 19965277 -9039379 + ARS406_DM Unknown Unknown 1 45 -308 1 737 693 12 0 0 chrUextra 19965377 19965460 -9039196 + DM176_LTR LTR Gypsy 425 507 0 1 737 3811 15 6 33 chrUextra 19965460 19966000 -9038656 + DM176_I LTR Gypsy 1 525 -5895 1 737 37 39 0 0 chrUextra 19966007 19966058 -9038598 + AT_rich Low_complexity Low_complexity 1 51 0 1 737 2852 181 16 13 chrUextra 19966158 19966834 -9037822 - SAR_DM Satellite Satellite -549 923 246 1 737 250 133 0 0 chrUextra 19966794 19966839 -9037817 + ARS406_DM Unknown Unknown 1 45 -308 1 737 1921 4 0 26 chrUextra 19966939 19967172 -9037484 - CIRCE LINE Composite -4242 2114 1888 1 737 503 302 42 42 chrUextra 19966952 19967239 -9037417 - Gypsy12_I LTR Gypsy -1425 4121 3835 1 737 2850 30 3 30 chrUextra 19967248 19967620 -9037036 - CIRCE LINE Composite -4474 1882 1521 1 737 502 269 72 9 chrUextra 19967784 19968005 -9036651 - MICROPIA_I LTR Gypsy -886 3590 3356 1 737 906 258 20 20 chrUextra 19968100 19968401 -9036255 + Gypsy4_I LTR Gypsy 2024 2324 -3964 1 737 744 182 0 12 chrUextra 19968502 19968674 -9035982 - SAR_DM Satellite Satellite -807 665 496 1 737 985 89 0 6 chrUextra 19968523 19968682 -9035974 + ARS406_DM Unknown Unknown 1 158 -195 1 737 2253 175 4 6 chrUextra 19968689 19969179 -9035477 - SAR_DM Satellite Satellite -569 903 415 1 737 5577 16 3 0 chrUextra 19969282 19969963 -9034693 + FW_DM LINE Jockey 2859 3541 -1151 1 737 3984 113 69 3 chrUextra 19970063 19970744 -9033912 + HMSBEAGLE_I LTR Gypsy 4297 5022 -1507 1 737 2999 173 10 9 chrUextra 19970850 19971520 -9033136 + SAR_DM Satellite Satellite 335 1005 -467 1 737 1455 30 20 10 chrUextra 19971624 19971826 -9032830 - BLASTOPIA_LTR LTR Gypsy -71 204 1 1 737 4098 2 2 0 chrUextra 19971826 19972304 -9032352 - BLASTOPIA_I LTR Gypsy 0 4481 4003 1 737 1527 152 3 7 chrUextra 19973188 19973480 -9031176 + SAR_DM Satellite Satellite 613 903 -569 1 737 1650 186 3 3 chrUextra 19973495 19973862 -9030794 + SAR_DM Satellite Satellite 496 862 -610 1 737 5086 0 0 0 chrUextra 19974052 19974644 -9030012 - FW_DM LINE Jockey 0 4692 4101 1 737 5622 7 0 1 chrUextra 19974744 19975424 -9029232 + STALKER4_I LTR Gypsy 4660 5338 -1192 1 737 1486 0 0 0 chrUextra 19975524 19975692 -9028964 + LSU-rRNA_Dme rRNA rRNA 2487 2654 -1246 1 737 4383 2 0 2 chrUextra 19975691 19976204 -9028452 + R1_DM LINE R1 3231 3742 -1614 1 737 2888 186 19 26 chrUextra 19976304 19976984 -9027672 - SAR_DM Satellite Satellite -494 675 1 1 737 4908 44 3 31 chrUextra 19977084 19977763 -9026893 - CIRCE LINE Composite -3603 2753 2094 1 737 2896 170 13 13 chrUextra 19977864 19978544 -9026112 + SAR_DM Satellite Satellite 376 1055 -417 1 737 1928 24 4 20 chrUextra 19978644 19978882 -9025774 + R1_DM LINE R1 2892 3125 -2231 1 737 3835 0 0 0 chrUextra 19978882 19979324 -9025332 + ACCORD_LTR LTR Gypsy 1 442 -116 1 737 5422 24 3 1 chrUextra 19979424 19980104 -9024552 - R1_DM LINE R1 -1285 4071 3391 1 737 2973 173 8 8 chrUextra 19980204 19980861 -9023795 + SAR_DM Satellite Satellite 420 1076 -396 1 737 5885 1 0 0 chrUextra 19980984 19981664 -9022992 + MAX_I LTR Pao 2816 3495 -4419 1 737 1087 0 15 0 chrUextra 19982546 19982678 -9021978 - R1_DM LINE R1 -5222 134 1 1 737 4758 2 0 0 chrUextra 19982678 19983224 -9021432 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2087 1 737 610 14 0 0 chrUextra 19983324 19983395 -9021261 - NTS_DM Other Other -169 71 1 1 737 1418 20 20 20 chrUextra 19983395 19983598 -9021058 - NTS_DM Other Other 0 240 38 1 737 870 9 0 27 chrUextra 19983598 19983710 -9020946 - NTS_DM Other Other -107 133 25 1 737 1252 18 0 6 chrUextra 19983762 19983927 -9020729 - NTS_DM Other Other -39 201 38 1 737 600 13 0 0 chrUextra 19983927 19984004 -9020652 - NTS_DM Other Other -107 133 57 1 737 5615 3 0 1 chrUextra 19984114 19984784 -9019872 + LSU-rRNA_Dme rRNA rRNA 218 886 -3014 1 737 5384 35 0 6 chrUextra 19984884 19985564 -9019092 - BATUMI_I LTR Pao -2872 5091 4416 1 737 899 87 10 19 chrUextra 19985664 19986342 -9018314 + RSP Satellite Satellite 1 672 0 1 737 4973 65 15 3 chrUextra 19986444 19987124 -9017532 - R1_DM LINE R1 -4529 827 140 1 737 5524 16 3 4 chrUextra 19987224 19987904 -9016752 - MICROPIA_I LTR Gypsy -190 4286 3608 1 737 945 34 0 0 chrUextra 19988004 19988121 -9016535 + CIRCE LINE Composite 6240 6356 0 1 737 4241 21 0 50 chrUextra 19988121 19988682 -9015974 + CIRCE LINE Composite 1 533 -5823 1 737 2899 183 9 6 chrUextra 19988784 19989461 -9015195 - SAR_DM Satellite Satellite -602 870 192 1 737 4627 68 3 3 chrUextra 19989613 19990243 -9014413 + R1_DM LINE R1 1 630 -4726 1 737 3593 162 13 9 chrUextra 19990344 19991024 -9013632 - Gypsy5_I LTR Gypsy -2265 4244 3562 1 737 5947 0 1 0 chrUextra 19991124 19991804 -9012852 + LSU-rRNA_Dme rRNA rRNA 2474 3154 -746 1 737 5389 16 144 1 chrUextra 19991904 19992584 -9012072 + R1_DM LINE R1 3557 4333 -1023 1 737 1724 136 64 46 chrUextra 19992689 19993069 -9011587 + TART LINE telomeric 4698 5051 -9426 1 737 2445 24 0 0 chrUextra 19993069 19993364 -9011292 + PROTOP_A DNA P 1 295 -810 1 737 4568 0 2 2 chrUextra 19993464 19993990 -9010666 + LSU-rRNA_Dme rRNA rRNA 3375 3900 0 1 737 22 56 0 0 chrUextra 19994062 19994098 -9010558 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 246 150 0 0 chrUextra 19994103 19994143 -9010513 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 737 5440 15 62 1 chrUextra 19994244 19994924 -9009732 - R1_DM LINE R1 -1497 3859 3139 1 737 874 178 102 15 chrUextra 19995234 19995439 -9009217 + DMLTR5 LTR Gypsy 44 266 0 1 737 351 49 65 16 chrUextra 19995438 19995500 -9009156 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 737 262 106 0 21 chrUextra 19995522 19995570 -9009086 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 737 2459 175 9 7 chrUextra 19995805 19996345 -9008311 - SAR_DM Satellite Satellite -577 679 29 1 737 827 68 0 0 chrUextra 19996345 19996462 -9008194 + ARS406_DM Unknown Unknown 73 189 -164 1 737 2459 175 9 7 chrUextra 19996462 19996484 -9008172 - SAR_DM Satellite Satellite -577 28 1 1 737 5295 35 1 3 chrUextra 19996584 19997251 -9007405 - R1_DM LINE R1 -132 5224 4559 1 737 1429 263 25 62 chrUextra 19997371 19998044 -9006612 + Gypsy12_LTR LTR Gypsy 570 1217 -1119 1 737 3112 26 3 0 chrUextra 19998144 19998529 -9006127 - R1_DM LINE R1 -218 5138 4753 1 737 2195 54 0 0 chrUextra 19998530 19998824 -9005832 + R1_DM LINE R1 409 702 -4654 1 737 3838 37 7 25 chrUextra 19998924 19999480 -9005176 + MDG1_I LTR Gypsy 5751 6296 -300 1 737 586 54 0 105 chrUextra 19999480 19999604 -9005052 + MDG1_I LTR Gypsy 6475 6585 -11 1 737 2521 10 0 0 chrUextra 19999704 20000000 -9004656 + FW_DM LINE Jockey 3668 3963 -729 1 737 2924 26 36 13 chrUextra 20000000 20000384 -9004272 + FW_DM LINE Jockey 3964 4356 -336 1 737 5382 16 0 0 chrUextra 20000484 20001150 -9003506 - PROTOP_A DNA P -333 772 107 1 737 1386 6 6 0 chrUextra 20001264 20001436 -9003220 + IDEFIX_LTR LTR Gypsy 422 594 0 1 737 25 0 0 0 chrUextra 20001625 20001650 -9003006 + AT_rich Low_complexity Low_complexity 1 25 0 1 737 1698 21 21 17 chrUextra 20002060 20002299 -9002357 + NTS_DM Other Other 1 240 0 1 737 1850 4 17 13 chrUextra 20002299 20002538 -9002118 + NTS_DM Other Other 1 240 0 1 737 1563 0 0 0 chrUextra 20002538 20002724 -9001932 + NTS_DM Other Other 1 186 -54 1 737 3038 171 9 9 chrUextra 20002830 20003504 -9001152 + SAR_DM Satellite Satellite 332 1005 -467 1 737 5351 21 16 1 chrUextra 20003604 20004284 -9000372 - ACCORD2_I LTR Gypsy -3406 3806 3117 1 737 2289 89 24 43 chrUextra 20004384 20005062 -8999594 - DMSAT6 Satellite Satellite -253 664 1 1 737 4378 33 105 0 chrUextra 20005164 20005773 -8998883 - R1_DM LINE R1 -4226 1130 458 1 737 620 40 0 0 chrUextra 20005768 20005844 -8998812 - R1_DM LINE R1 -1107 4249 4174 1 737 826 8 32 24 chrUextra 20005944 20006067 -8998589 + NTS_DM Other Other 117 240 0 1 737 1831 8 17 13 chrUextra 20006067 20006306 -8998350 + NTS_DM Other Other 1 240 0 1 737 1290 6 0 18 chrUextra 20006306 20006471 -8998185 + NTS_DM Other Other 1 162 -78 1 737 293 70 0 0 chrUextra 20006581 20006624 -8998032 + NTS_DM Other Other 4 46 -194 1 737 2480 81 30 22 chrUextra 20006733 20007404 -8997252 - DMSAT6 Satellite Satellite -64 676 1 1 737 5453 32 6 1 chrUextra 20007504 20008184 -8996472 - CIRCE LINE Composite -2838 3518 2836 1 737 1256 13 0 6 chrUextra 20008284 20008442 -8996214 - NTS_DM Other Other -83 157 1 1 737 1723 25 17 17 chrUextra 20008442 20008682 -8995974 - NTS_DM Other Other 0 240 1 1 737 1756 17 17 17 chrUextra 20008682 20008922 -8995734 - NTS_DM Other Other 0 240 1 1 737 799 207 34 15 chrUextra 20009064 20009270 -8995386 + TOM_I LTR Gypsy 3815 4024 -2088 1 737 345 229 90 60 chrUextra 20009285 20009485 -8995171 - Gypsy_LTR LTR Gypsy -20 462 257 1 737 1798 62 4 0 chrUextra 20010282 20010524 -8994132 + Baggins1 LINE LOA 4791 5033 -420 1 737 1404 135 40 37 chrUextra 20010624 20010843 -8993813 + Jockey2 LINE Jockey 3097 3318 -110 1 737 1068 30 0 0 chrUextra 20010843 20010975 -8993681 + (TTA)n Simple_repeat Simple_repeat 3 134 0 1 737 1404 135 40 37 chrUextra 20010975 20011078 -8993578 + Jockey2 LINE Jockey 3319 3420 -8 1 737 723 111 275 0 chrUextra 20011107 20011278 -8993378 - DNAREP1_DM LINE Penelope -175 419 202 1 737 3063 175 6 7 chrUextra 20011404 20012079 -8992577 + SAR_DM Satellite Satellite 403 1076 -396 1 737 21 0 0 0 chrUextra 20012679 20012700 -8991956 + AT_rich Low_complexity Low_complexity 1 21 0 1 737 231 0 0 0 chrUextra 20012837 20012864 -8991792 + BATUMI_LTR LTR Pao 1 27 -245 1 737 1176 0 0 0 chrUextra 20013000 20013135 -8991521 + 5S_DM RNA RNA 1 135 0 1 737 1176 0 0 0 chrUextra 20013376 20013511 -8991145 + 5S_DM RNA RNA 1 135 0 1 737 5546 24 3 0 chrUextra 20014524 20015204 -8989452 - R1_DM LINE R1 -169 5187 4506 1 737 5790 0 0 1 chrUextra 20015304 20015984 -8988672 + DM176_I LTR Gypsy 4937 5615 -805 1 737 5455 32 0 0 chrUextra 20016087 20016764 -8987892 + R1_DM LINE R1 2509 3185 -2171 1 737 224 185 31 0 chrUextra 20016924 20016989 -8987667 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 737 22 35 0 0 chrUextra 20017276 20017305 -8987351 + AT_rich Low_complexity Low_complexity 1 29 0 1 737 58 15 0 0 chrUextra 20017479 20017544 -8987112 + AT_rich Low_complexity Low_complexity 1 65 0 1 737 2205 264 4 3 chrUextra 20017649 20018324 -8986332 - ROVER-I_DM LTR Gypsy -3005 3579 2904 1 737 5496 22 0 0 chrUextra 20018424 20019104 -8985552 + FW_DM LINE Jockey 2620 3299 -1393 1 737 1804 0 9 0 chrUextra 20019204 20019418 -8985238 - R1_DM LINE R1 -5140 216 1 1 737 455 36 0 0 chrUextra 20019418 20019473 -8985183 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 737 3635 0 0 0 chrUextra 20019469 20019884 -8984772 - R2_DM LINE R2 -3 3604 3190 1 737 3222 35 2 19 chrUextra 20019984 20020417 -8984239 - BATUMI_I LTR Pao -4915 3048 2623 1 737 1984 17 0 4 chrUextra 20020426 20020664 -8983992 - BATUMI_I LTR Pao -5509 2454 2218 1 737 5395 25 26 0 chrUextra 20020764 20021444 -8983212 + ROO_I LTR Pao 3847 4544 -3712 1 737 3712 81 52 27 chrUextra 20021548 20022224 -8982432 + STALKER4_I LTR Gypsy 824 1516 -5014 1 737 1427 69 0 0 chrUextra 20022324 20022512 -8982144 + Gypsy12_I LTR Gypsy 5359 5546 0 1 737 1996 194 12 41 chrUextra 20022511 20022994 -8981662 + Gypsy12_LTR LTR Gypsy 1 469 -1867 1 737 22 0 0 0 chrUextra 20023373 20023395 -8981261 + AT_rich Low_complexity Low_complexity 1 22 0 1 737 21 89 0 0 chrUextra 20024300 20024356 -8980300 + AT_rich Low_complexity Low_complexity 1 56 0 1 737 24 85 0 0 chrUextra 20024394 20024453 -8980203 + AT_rich Low_complexity Low_complexity 1 59 0 1 737 681 34 11 0 chrUextra 20024664 20024752 -8979904 - DMCR1A LINE CR1 -3300 1170 1082 1 737 5364 2 0 37 chrUextra 20025444 20026124 -8978532 - LSU-rRNA_Dme rRNA rRNA -3170 730 76 1 737 5660 26 0 0 chrUextra 20026224 20026904 -8977752 - DIVER_I LTR Pao -2986 2657 1978 1 737 246 150 0 0 chrUextra 20027019 20027059 -8977597 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 737 255 125 0 0 chrUextra 20027102 20027142 -8977514 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 737 22 56 0 0 chrUextra 20027155 20027191 -8977465 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 870 9 0 27 chrUextra 20027217 20027329 -8977327 + NTS_DM Other Other 25 133 -107 1 737 1252 18 0 6 chrUextra 20027329 20027494 -8977162 + NTS_DM Other Other 38 201 -39 1 737 852 18 0 27 chrUextra 20027546 20027658 -8976998 + NTS_DM Other Other 25 133 -107 1 737 226 0 0 0 chrUextra 20027658 20027684 -8976972 + NTS_DM Other Other 38 63 -177 1 737 246 295 63 89 chrUextra 20028224 20028414 -8976242 - Invader1_LTR LTR Gypsy -55 368 184 1 737 4326 2 0 0 chrUextra 20028564 20029060 -8975596 - LSU-rRNA_Dme rRNA rRNA -1617 2283 1788 1 737 1059 0 14 14 chrUextra 20029104 20029244 -8975412 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1649 1 737 1808 181 4 13 chrUextra 20029347 20029783 -8974873 - STALKER4_I LTR Gypsy -6676 726 235 1 737 5535 9 0 0 chrUextra 20030124 20030804 -8973852 + DM297_I LTR Gypsy 1139 1818 -4349 1 737 590 117 10 0 chrUextra 20030904 20031007 -8973649 - ARS406_DM Unknown Unknown -249 104 1 1 737 2813 186 9 9 chrUextra 20030915 20031583 -8973073 + SAR_DM Satellite Satellite 195 862 -610 1 737 4073 4 0 0 chrUextra 20031684 20032155 -8972501 - ROO_I LTR Pao -709 7547 7077 1 737 1906 0 0 0 chrUextra 20032141 20032364 -8972292 - ROO_I LTR Pao -3752 4504 4282 1 737 3037 164 16 10 chrUextra 20032464 20033144 -8971512 + SAR_DM Satellite Satellite 333 1016 -456 1 737 5260 22 21 6 chrUextra 20033244 20033924 -8970732 + MDG3_I LTR Gypsy 2737 3426 -1560 1 737 2884 36 42 5 chrUextra 20034024 20034589 -8970067 - DOC2_DM LINE Jockey -4162 631 10 1 737 656 11 21 31 chrUextra 20034608 20034704 -8969952 - TAHRE LINE telomeric -9297 1166 1072 1 737 4177 8 0 0 chrUextra 20034804 20035294 -8969362 + FW_DM LINE Jockey 544 1033 -3659 1 737 1612 16 0 0 chrUextra 20035292 20035484 -8969172 + FW_DM LINE Jockey 1271 1462 -3230 1 737 1416 23 0 0 chrUextra 20035584 20035756 -8968900 + (TTA)n Simple_repeat Simple_repeat 3 174 0 1 737 1459 135 39 36 chrUextra 20035776 20036003 -8968653 + Jockey2 LINE Jockey 3089 3318 -110 1 737 1122 29 0 0 chrUextra 20036003 20036141 -8968515 + (TTA)n Simple_repeat Simple_repeat 3 140 0 1 737 1459 135 39 36 chrUextra 20036141 20036244 -8968412 + Jockey2 LINE Jockey 3319 3420 -8 1 737 5697 7 0 1 chrUextra 20036364 20037040 -8967616 - FW_DM LINE Jockey -3837 855 181 1 737 5271 28 54 1 chrUextra 20037144 20037824 -8966832 - DOC3_DM LINE Jockey -864 3876 3161 1 737 322 117 67 0 chrUextra 20037924 20037984 -8966672 + NTS_DM Other Other 27 90 -150 1 737 28 48 0 0 chrUextra 20038259 20038301 -8966355 + AT_rich Low_complexity Low_complexity 1 42 0 1 737 1157 23 28 22 chrUextra 20038706 20038887 -8965769 + NTS_DM Other Other 59 240 0 1 737 1850 4 17 13 chrUextra 20038887 20039126 -8965530 + NTS_DM Other Other 1 240 0 1 737 1824 0 21 13 chrUextra 20039126 20039364 -8965292 + NTS_DM Other Other 1 240 0 1 737 476 107 35 12 chrUextra 20039580 20039665 -8964991 - NTS_DM Other Other -150 90 4 1 737 1301 6 0 18 chrUextra 20039775 20039940 -8964716 - NTS_DM Other Other -78 162 1 1 737 1693 9 18 13 chrUextra 20039940 20040164 -8964492 - NTS_DM Other Other 0 240 16 1 737 3290 2 0 60 chrUextra 20040264 20040694 -8963962 - LSU-rRNA_Dme rRNA rRNA -3496 404 1 1 737 21 95 0 0 chrUextra 20040706 20040769 -8963887 + AT_rich Low_complexity Low_complexity 1 63 0 1 737 5544 24 0 7 chrUextra 20041044 20041724 -8962932 - BATUMI_I LTR Pao -1812 6151 5477 1 737 2625 187 41 21 chrUextra 20041827 20042504 -8962152 - SAR_DM Satellite Satellite -353 1119 429 1 737 5728 6 1 3 chrUextra 20043387 20044064 -8960592 - LSU-rRNA_Dme rRNA rRNA -2446 1454 779 1 737 2636 204 13 4 chrUextra 20045724 20046404 -8958252 + SAR_DM Satellite Satellite 248 933 -539 1 737 345 24 0 0 chrUextra 20046504 20046546 -8958110 + (TTCTC)n Simple_repeat Simple_repeat 4 45 0 1 737 1512 17 0 0 chrUextra 20046555 20046734 -8957922 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 737 5850 1 0 1 chrUextra 20047284 20047964 -8956692 + DMRT1A LINE R1 2238 2916 -2267 1 737 435 0 0 53 chrUextra 20048067 20048124 -8956532 - NTS_DM Other Other -162 78 25 1 737 22 56 0 0 chrUextra 20048150 20048186 -8956470 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 255 125 0 0 chrUextra 20048199 20048239 -8956417 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 246 150 0 0 chrUextra 20048282 20048322 -8956334 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 246 150 0 0 chrUextra 20048374 20048414 -8956242 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 22 56 0 0 chrUextra 20048419 20048455 -8956201 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 1862 0 0 5 chrUextra 20048527 20048744 -8955912 - LSU-rRNA_Dme rRNA rRNA 0 3900 3685 1 737 3507 36 150 15 chrUextra 20048844 20049524 -8955132 + BATUMI_I LTR Pao 2700 3471 -4492 1 737 5784 3 0 0 chrUextra 20049624 20050304 -8954352 - DM297_I LTR Gypsy -4952 1215 536 1 737 29 47 0 0 chrUextra 20050424 20050467 -8954189 + AT_rich Low_complexity Low_complexity 1 43 0 1 737 28 71 0 0 chrUextra 20050511 20050567 -8954089 + AT_rich Low_complexity Low_complexity 1 56 0 1 737 2607 53 74 3 chrUextra 20050706 20051084 -8953572 - PROTOP DNA P -3968 512 108 1 737 5727 1 1 0 chrUextra 20051184 20051864 -8952792 - LSU-rRNA_Dme rRNA rRNA -2858 1042 362 1 737 5833 4 0 0 chrUextra 20051964 20052644 -8952012 + R1_DM LINE R1 2076 2755 -2601 1 737 4199 38 0 0 chrUextra 20052744 20053274 -8951382 + STALKER4_I LTR Gypsy 4243 4772 -1758 1 737 868 62 0 27 chrUextra 20053273 20053422 -8951234 + DMSAT6 Satellite Satellite 246 390 -80 1 92 5528 16 1 1 chrUextra 20053524 20054204 -8950452 + STALKER4_I LTR Gypsy 2117 2796 -3734 1 738 5716 0 0 0 chrUextra 20054304 20054984 -8949672 + ROVER-I_DM LTR Gypsy 1766 2445 -4139 1 738 34 24 0 0 chrUextra 20055129 20055170 -8949486 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 5685 0 1 0 chrUextra 20055864 20056544 -8948112 - ROO_I LTR Pao -134 8122 7442 1 738 1982 17 0 0 chrUextra 20057424 20057657 -8946999 + Invader1_LTR LTR Gypsy 191 423 0 1 738 3805 13 0 2 chrUextra 20057657 20058104 -8946552 + Invader1_I LTR Gypsy 1 446 -2740 1 738 237 31 0 0 chrUextra 20058984 20059016 -8945640 + Invader6_LTR LTR Gypsy 362 393 0 1 738 5542 14 0 0 chrUextra 20059016 20059664 -8944992 + Invader6_I LTR Gypsy 1 648 -3451 1 738 1525 33 14 9 chrUextra 20060544 20060756 -8943900 - CIRCE LINE Composite -1163 5193 4981 1 738 241 32 0 0 chrUextra 20061108 20061139 -8943517 - CIRCE LINE Composite -1376 4980 4950 1 738 645 47 0 0 chrUextra 20061139 20061224 -8943432 + R1_DM LINE R1 2864 2948 -2408 1 738 2692 0 6 3 chrUextra 20062104 20062425 -8942231 + LSU-rRNA_Dme rRNA rRNA 1467 1788 -2112 1 738 2742 0 0 3 chrUextra 20062469 20062784 -8941872 + LSU-rRNA_Dme rRNA rRNA 1788 2101 -1799 1 738 5511 25 1 1 chrUextra 20062884 20063564 -8941092 - R1_DM LINE R1 -1056 4300 3621 1 738 2148 16 0 0 chrUextra 20063664 20063920 -8940736 + Invader3_LTR LTR Gypsy 43 298 0 1 738 3639 2 0 0 chrUextra 20063920 20064344 -8940312 + Invader3_I LTR Gypsy 1 424 -4464 1 738 2560 189 12 21 chrUextra 20064448 20065122 -8939534 - SAR_DM Satellite Satellite -353 1119 452 1 738 5703 0 3 0 chrUextra 20065224 20065904 -8938752 - ROO_I LTR Pao -4534 3722 3041 1 738 5618 29 0 0 chrUextra 20066004 20066684 -8937972 + R1_DM LINE R1 4096 4775 -581 1 738 5645 21 0 0 chrUextra 20066787 20067464 -8937192 + MAX_I LTR Pao 2935 3611 -4303 1 738 2787 164 30 18 chrUextra 20067567 20068236 -8936420 + SAR_DM Satellite Satellite 282 958 -514 1 738 270 122 0 0 chrUextra 20068344 20068393 -8936263 - SAR_DM Satellite Satellite -881 591 543 1 738 2106 195 21 9 chrUextra 20068404 20068932 -8935724 - SAR_DM Satellite Satellite -396 1076 543 1 738 244 235 25 0 chrUextra 20068943 20069024 -8935632 - SAR_DM Satellite Satellite -396 1076 994 1 738 4756 0 0 44 chrUextra 20069124 20069733 -8934923 - LSU-rRNA_Dme rRNA rRNA -3318 582 1 1 738 5697 9 0 0 chrUextra 20069925 20070584 -8934072 + Invader1_I LTR Gypsy 1 659 -2527 1 738 5838 12 0 0 chrUextra 20070684 20071364 -8933292 + Copia2_I LTR Copia 1589 2268 -1894 1 738 1564 6 0 0 chrUextra 20072244 20072423 -8932233 + LSU-rRNA_Dme rRNA rRNA 2454 2632 -1268 1 738 4253 10 4 0 chrUextra 20072423 20072924 -8931732 + R1_DM LINE R1 1 503 -4853 1 738 2566 196 24 9 chrUextra 20073024 20073688 -8930968 + SAR_DM Satellite Satellite 446 1119 -353 1 738 248 227 45 0 chrUextra 20073638 20073704 -8930952 - XDMR_DM Unknown Unknown -31 329 261 1 738 920 61 3 18 chrUextra 20073846 20074484 -8930172 - RSP Satellite Satellite 0 628 1 1 738 229 216 0 0 chrUextra 20074717 20074768 -8929888 + A-rich Low_complexity Low_complexity 1 51 0 1 738 793 135 0 0 chrUextra 20075562 20075688 -8928968 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 1 738 270 130 0 0 chrUextra 20075787 20075833 -8928823 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 1 738 2908 181 10 10 chrUextra 20076144 20076824 -8927832 - SAR_DM Satellite Satellite -494 978 299 1 738 4014 0 8 4 chrUextra 20076924 20077406 -8927250 + LSU-rRNA_Dme rRNA rRNA 1305 1788 -2112 1 738 1353 0 0 0 chrUextra 20077450 20077604 -8927052 + LSU-rRNA_Dme rRNA rRNA 1788 1941 -1959 1 738 2199 4 4 4 chrUextra 20077704 20077978 -8926678 + Copia_LTR LTR Copia 3 276 0 1 738 3421 2 0 10 chrUextra 20077978 20078384 -8926272 + Copia_I LTR Copia 1 402 -4191 1 738 5841 1 0 1 chrUextra 20078484 20079164 -8925492 + R1_DM LINE R1 1464 2142 -3214 1 738 607 0 0 0 chrUextra 20079264 20079339 -8925317 + NTS_DM Other Other 57 131 -109 1 738 1391 25 20 20 chrUextra 20079341 20079544 -8925112 + NTS_DM Other Other 38 240 0 1 738 1734 21 17 17 chrUextra 20079544 20079784 -8924872 + NTS_DM Other Other 1 240 0 1 738 1332 6 0 0 chrUextra 20079784 20079944 -8924712 + NTS_DM Other Other 1 160 -80 1 738 4901 52 28 16 chrUextra 20080044 20080724 -8923932 - R1_DM LINE R1 -4529 827 140 1 738 34 24 0 0 chrUextra 20081322 20081363 -8923293 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 3090 3 3 0 chrUextra 20081605 20081961 -8922695 - LSU-rRNA_Dme rRNA rRNA -1756 2144 1788 1 738 2303 0 7 4 chrUextra 20082005 20082284 -8922372 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1509 1 738 2283 106 6 62 chrUextra 20082407 20083064 -8921592 - DMSAT6 Satellite Satellite 0 620 1 1 738 1206 19 0 6 chrUextra 20083166 20083327 -8921329 + NTS_DM Other Other 42 201 -39 1 738 870 9 0 27 chrUextra 20083379 20083491 -8921165 + NTS_DM Other Other 25 133 -107 1 738 1252 18 0 6 chrUextra 20083491 20083656 -8921000 + NTS_DM Other Other 38 201 -39 1 738 853 18 0 27 chrUextra 20083708 20083820 -8920836 + NTS_DM Other Other 25 133 -107 1 738 5827 7 0 0 chrUextra 20083944 20084624 -8920032 + IDEFIX_I LTR Gypsy 1572 2251 -3377 1 738 1252 18 0 6 chrUextra 20084728 20084893 -8919763 + NTS_DM Other Other 38 201 -39 1 738 21 57 0 0 chrUextra 20084893 20084928 -8919728 + AT_rich Low_complexity Low_complexity 1 35 0 1 738 832 9 9 27 chrUextra 20084954 20085065 -8919591 + NTS_DM Other Other 25 133 -107 1 738 817 0 0 0 chrUextra 20085065 20085161 -8919495 + NTS_DM Other Other 38 133 -107 1 738 1408 20 20 20 chrUextra 20085161 20085364 -8919292 + NTS_DM Other Other 38 240 0 1 738 305 50 0 0 chrUextra 20085364 20085404 -8919252 + NTS_DM Other Other 1 40 -200 1 738 3078 168 13 7 chrUextra 20085507 20086180 -8918476 - SAR_DM Satellite Satellite -425 1047 371 1 738 2825 186 9 7 chrUextra 20086284 20086956 -8917700 + SAR_DM Satellite Satellite 231 903 -569 1 738 3029 163 14 9 chrUextra 20087064 20087732 -8916924 + SAR_DM Satellite Satellite 406 1076 -396 1 738 2800 68 7 17 chrUextra 20087936 20088341 -8916315 - Baggins1 LINE LOA -262 5191 4791 1 738 946 73 7 19 chrUextra 20088622 20089301 -8915355 + RSP Satellite Satellite 1 671 0 1 738 855 83 0 0 chrUextra 20089401 20089521 -8915135 + Gypsy12_I LTR Gypsy 1435 1554 -3992 1 738 2080 114 12 12 chrUextra 20089528 20089847 -8914809 + Gypsy12_I LTR Gypsy 1503 1821 -3725 1 738 1553 81 110 0 chrUextra 20089844 20090080 -8914576 + Gypsy12_I LTR Gypsy 4465 4726 -820 1 738 3025 168 32 7 chrUextra 20090180 20090859 -8913797 - SAR_DM Satellite Satellite -430 1042 347 1 738 5889 0 0 0 chrUextra 20090959 20091638 -8913018 - R1_DM LINE R1 -2420 2936 2258 1 738 261 29 0 0 chrUextra 20091738 20091772 -8912884 + R1_DM LINE R1 5323 5356 0 1 738 4606 54 3 3 chrUextra 20091805 20092417 -8912239 + R1_DM LINE R1 1 612 -4744 1 738 2837 188 9 7 chrUextra 20092520 20093196 -8911460 + SAR_DM Satellite Satellite 195 871 -601 1 738 5701 3 1 1 chrUextra 20093296 20093975 -8910681 - R1_DM LINE R1 -3958 1398 720 1 738 2378 28 9 9 chrUextra 20094075 20094396 -8910260 - BATUMI_I LTR Pao -1216 6747 6427 1 738 2628 24 0 3 chrUextra 20094419 20094754 -8909902 + BATUMI_I LTR Pao 7303 7636 -327 1 738 1820 4 17 17 chrUextra 20094869 20095109 -8909547 - NTS_DM Other Other 0 240 1 1 738 1734 21 17 17 chrUextra 20095109 20095349 -8909307 - NTS_DM Other Other 0 240 1 1 738 1236 17 22 22 chrUextra 20095349 20095533 -8909123 - NTS_DM Other Other 0 240 57 1 738 501 299 44 52 chrUextra 20095968 20096311 -8908345 + FROGGER_I LTR Copia 420 759 -1318 1 738 780 102 0 0 chrUextra 20096412 20096539 -8908117 - ARS406_DM Unknown Unknown -226 127 1 1 738 725 181 6 12 chrUextra 20096416 20096584 -8908072 + SAR_DM Satellite Satellite 523 689 -783 1 738 618 118 0 0 chrUextra 20096600 20096702 -8907954 - ARS406_DM Unknown Unknown -251 102 1 1 738 2157 166 10 8 chrUextra 20096611 20097090 -8907566 + SAR_DM Satellite Satellite 554 1033 -439 1 738 521 330 33 51 chrUextra 20097299 20097870 -8906786 + HMSBEAGLE_I LTR Gypsy 2650 3210 -3319 1 738 5912 1 1 0 chrUextra 20097973 20098649 -8906007 + SSU-rRNA_Dme rRNA rRNA 39 715 -1280 1 738 1731 0 0 0 chrUextra 20098755 20098961 -8905695 - NTS_DM Other Other -34 206 1 1 738 1861 0 17 13 chrUextra 20098961 20099200 -8905456 - NTS_DM Other Other 0 240 1 1 738 1042 21 0 7 chrUextra 20099282 20099428 -8905228 - NTS_DM Other Other -39 201 57 1 738 5597 13 1 0 chrUextra 20099528 20100207 -8904449 + PROTOP_A DNA P 380 1059 -46 1 738 3924 114 24 1 chrUextra 20100307 20100986 -8903670 - IDEFIX_I LTR Gypsy -109 5519 4826 1 738 5953 0 1 0 chrUextra 20101865 20102544 -8902112 - SSU-rRNA_Dme rRNA rRNA -1054 941 262 1 738 3284 191 43 0 chrUextra 20104202 20104881 -8899775 - IDEFIX_I LTR Gypsy -4359 1269 562 1 738 3873 8 0 66 chrUextra 20105097 20105612 -8899044 - T412LTR LTR LTR 0 481 1 1 738 1346 0 0 0 chrUextra 20105502 20105660 -8898996 - DM412 LTR Gypsy 0 6897 6740 1 738 3127 166 10 9 chrUextra 20105760 20106434 -8898222 - SAR_DM Satellite Satellite -466 1006 332 1 738 1171 19 0 6 chrUextra 20106539 20106699 -8897957 - PROTOP_A DNA P -324 781 623 1 738 3944 50 0 0 chrUextra 20106700 20107218 -8897438 + ZAM_I LTR Gypsy 6687 7204 -286 1 738 3448 22 0 0 chrUextra 20107318 20107735 -8896921 - DMRT1B LINE R1 -1049 4134 3718 1 738 2207 30 0 0 chrUextra 20107729 20107997 -8896659 - DMRT1B LINE R1 -1572 3611 3344 1 738 5566 13 22 3 chrUextra 20108097 20108776 -8895880 - SSU-rRNA_Dme rRNA rRNA -365 1630 939 1 738 1667 21 21 21 chrUextra 20108876 20109116 -8895540 - NTS_DM Other Other 0 240 1 1 738 1756 17 17 17 chrUextra 20109116 20109356 -8895300 - NTS_DM Other Other 0 240 1 1 738 1374 20 20 20 chrUextra 20109356 20109555 -8895101 - NTS_DM Other Other 0 240 42 1 738 5766 0 3 6 chrUextra 20109655 20110334 -8894322 - SSU-rRNA_Dme rRNA rRNA -222 1773 1097 1 738 2791 185 17 6 chrUextra 20110455 20111113 -8893543 + SAR_DM Satellite Satellite 321 985 -487 1 738 646 217 0 44 chrUextra 20111253 20111412 -8893244 + HETRP_DM Satellite Satellite 1518 1669 -203 1 738 715 186 8 24 chrUextra 20111529 20111704 -8892952 + HETRP_DM Satellite Satellite 1518 1682 -190 1 738 282 29 0 0 chrUextra 20111821 20111856 -8892800 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 738 3498 166 9 8 chrUextra 20111992 20112660 -8891996 - SAR_DM Satellite Satellite -435 1037 369 1 738 3287 174 7 18 chrUextra 20112775 20113448 -8891208 - SAR_DM Satellite Satellite -382 1090 425 1 738 5821 25 4 1 chrUextra 20113550 20114229 -8890427 - R1_DM LINE R1 -2209 3147 2467 1 738 6162 3 0 0 chrUextra 20114329 20115008 -8889648 + R1_DM LINE R1 2488 3166 -2190 1 738 6022 16 0 0 chrUextra 20115108 20115787 -8888869 - R1_DM LINE R1 -2994 2362 1684 1 738 2763 80 19 1 chrUextra 20115887 20116566 -8888090 - DMSAT6 Satellite Satellite -28 690 1 1 738 6159 3 4 3 chrUextra 20116666 20117345 -8887311 + SSU-rRNA_Dme rRNA rRNA 801 1480 -515 1 738 5940 19 1 0 chrUextra 20117445 20118124 -8886532 - DMRT1B LINE R1 -1919 3264 2585 1 738 6172 0 0 1 chrUextra 20118224 20118903 -8885753 + DOC LINE Jockey 1186 1863 -2862 1 738 6016 3 0 7 chrUextra 20119003 20119682 -8884974 + R1_DM LINE R1 4605 5278 -78 1 738 6142 1 1 0 chrUextra 20119783 20120461 -8884195 + LSU-rRNA_Dme rRNA rRNA 221 899 -3001 1 738 3062 135 67 14 chrUextra 20120562 20121143 -8883513 - HETA LINE telomeric -617 5464 4865 1 738 2755 180 13 10 chrUextra 20121340 20121366 -8883290 + SAR_DM Satellite Satellite 1 29 -1221 1 738 615 67 56 0 chrUextra 20121366 20121455 -8883201 - ARS406_DM Unknown Unknown -164 189 96 1 738 2755 180 13 10 chrUextra 20121455 20122019 -8882637 + SAR_DM Satellite Satellite 30 681 -569 1 738 1528 165 23 7 chrUextra 20122121 20122426 -8882230 + SAR_DM Satellite Satellite 594 903 -569 1 738 1928 169 3 3 chrUextra 20122441 20122798 -8881858 + SAR_DM Satellite Satellite 496 852 -620 1 738 3852 14 5 1 chrUextra 20122898 20123340 -8881316 - DOC LINE Jockey -43 4682 3861 1 738 1228 100 282 5 chrUextra 20123677 20123886 -8880770 - DMCR1A LINE CR1 -984 3486 3220 1 738 3682 50 7 7 chrUextra 20123897 20124356 -8880300 - DMCR1A LINE CR1 -2598 1872 1414 1 738 6204 1 0 0 chrUextra 20124456 20125135 -8879521 + ROO_I LTR Pao 5477 6155 -2101 1 738 6201 3 1 3 chrUextra 20125235 20125914 -8878742 + LSU-rRNA_Dme rRNA rRNA 742 1419 -2481 1 738 3920 265 16 39 chrUextra 20126798 20128232 -8876424 - SAR_DM Satellite Satellite -255 1401 1 1 738 899 109 0 0 chrUextra 20128113 20128251 -8876405 + ARS406_DM Unknown Unknown 1 138 -215 1 738 6279 7 0 0 chrUextra 20128351 20129030 -8875626 - Copia2_I LTR Copia -1811 2351 1673 1 738 2629 116 24 16 chrUextra 20129132 20129623 -8875033 + MDG1_I LTR Gypsy 727 1221 -5375 1 738 1262 82 15 0 chrUextra 20129614 20129809 -8874847 + MDG1_I LTR Gypsy 1135 1332 -5264 1 738 6261 0 0 0 chrUextra 20129909 20130588 -8874068 - G_DM LINE Jockey -832 3514 2836 1 738 3197 181 9 13 chrUextra 20130689 20131367 -8873289 + SAR_DM Satellite Satellite 195 869 -603 1 738 4485 6 0 7 chrUextra 20131475 20132015 -8872641 - DM176_I LTR Gypsy -5884 536 1 1 738 1149 15 0 0 chrUextra 20132015 20132146 -8872510 - DM176_LTR LTR Gypsy 0 507 377 1 738 4130 149 48 0 chrUextra 20132253 20132925 -8871731 - Gypsy5_I LTR Gypsy -2711 3798 3095 1 738 4858 2 0 44 chrUextra 20133025 20133598 -8871058 - LSU-rRNA_Dme rRNA rRNA -3352 548 1 1 738 21 95 0 0 chrUextra 20133610 20133673 -8870983 + AT_rich Low_complexity Low_complexity 1 63 0 1 738 3150 172 12 9 chrUextra 20133804 20134451 -8870205 - SAR_DM Satellite Satellite -626 846 198 1 738 758 108 0 16 chrUextra 20134361 20134483 -8870173 + ARS406_DM Unknown Unknown 1 120 -233 1 738 2604 264 0 1 chrUextra 20134585 20135257 -8869399 - ROVER-I_DM LTR Gypsy -2531 4053 3383 1 738 5913 25 0 0 chrUextra 20135362 20136041 -8868615 + MAX_I LTR Pao 4760 5438 -2476 1 738 5583 30 4 13 chrUextra 20136141 20136820 -8867836 - BATUMI_I LTR Pao -5460 2503 1831 1 738 6204 6 0 0 chrUextra 20136920 20137599 -8867057 + R1_DM LINE R1 1858 2536 -2820 1 738 2960 56 1 21 chrUextra 20137699 20138098 -8866558 + STALKER4_LTR LTR Gypsy 43 399 -3 1 738 30 45 0 0 chrUextra 20138184 20138228 -8866428 + AT_rich Low_complexity Low_complexity 1 44 0 1 738 662 204 7 7 chrUextra 20138235 20138378 -8866278 + Stalker2_I LTR Gypsy 291 433 -6969 1 738 6126 6 0 0 chrUextra 20138480 20139157 -8865499 + DMRT1B LINE R1 4014 4690 -493 1 738 3604 195 4 0 chrUextra 20139258 20139936 -8864720 - ROVER-I_DM LTR Gypsy -2035 4549 3869 1 738 1299 0 0 0 chrUextra 20140036 20140180 -8864476 + ROO_I LTR Pao 8113 8256 0 1 738 3982 5 0 0 chrUextra 20140180 20140608 -8864048 + ROO_LTR LTR Pao 1 428 0 1 738 5773 37 1 0 chrUextra 20140815 20141494 -8863162 - R1_DM LINE R1 -3439 1917 1238 1 738 863 21 0 0 chrUextra 20141594 20141690 -8862966 + R1_DM LINE R1 5261 5356 0 1 738 4379 58 4 4 chrUextra 20141723 20142273 -8862383 + R1_DM LINE R1 1 550 -4806 1 738 5049 100 0 1 chrUextra 20142373 20143052 -8861604 - Gypsy12_I LTR Gypsy -1521 4025 3348 1 738 313 133 33 0 chrUextra 20143152 20143212 -8861444 - ARS406_DM Unknown Unknown -291 62 1 1 738 2980 197 14 5 chrUextra 20143172 20143824 -8860832 + SAR_DM Satellite Satellite 246 903 -569 1 738 5817 25 1 1 chrUextra 20143931 20144610 -8860046 + R1_DM LINE R1 3600 4278 -1078 1 738 880 28 9 0 chrUextra 20145500 20145606 -8859050 + NTS_DM Other Other 27 133 -107 1 738 876 0 0 0 chrUextra 20145606 20145702 -8858954 + NTS_DM Other Other 38 133 -107 1 738 1526 20 20 20 chrUextra 20145702 20145905 -8858751 + NTS_DM Other Other 38 240 0 1 738 1878 21 17 17 chrUextra 20145905 20146145 -8858511 + NTS_DM Other Other 1 240 0 1 738 4589 70 0 52 chrUextra 20146268 20146947 -8857709 + ROO_I LTR Pao 239 882 -7374 1 738 6297 1 0 1 chrUextra 20147047 20147726 -8856930 - LSU-rRNA_Dme rRNA rRNA -1414 2486 1809 1 738 5669 0 0 15 chrUextra 20147827 20148505 -8856151 + DM412 LTR Gypsy 982 1649 -5248 1 738 2178 133 40 12 chrUextra 20148606 20149284 -8855372 - DMSAT6 Satellite Satellite -86 697 1 1 738 4422 6 0 0 chrUextra 20149384 20149909 -8854747 + QUASIMODO_I LTR Gypsy 5536 6060 0 1 738 479 0 0 0 chrUextra 20149909 20149963 -8854693 + QUASIMODO_LTR LTR Gypsy 1 54 -604 1 738 904 0 0 0 chrUextra 20149964 20150063 -8854593 + DMRT1B LINE R1 713 811 -4372 1 738 456 0 0 0 chrUextra 20150163 20150214 -8854442 + MAX_I LTR Pao 7864 7914 0 1 738 2932 6 0 0 chrUextra 20150214 20150535 -8854121 + MAX_LTR LTR Pao 1 321 0 1 738 2769 3 0 0 chrUextra 20150535 20150842 -8853814 + BARI_DM DNA Tc1 1352 1658 -70 1 738 2960 181 9 24 chrUextra 20150942 20151609 -8853047 + SAR_DM Satellite Satellite 462 1118 -354 1 738 311 172 16 0 chrUextra 20151554 20151618 -8853038 - XDMR Unknown Unknown 0 361 297 1 738 1516 305 19 43 chrUextra 20151721 20152399 -8852257 - Gypsy6_I LTR Gypsy -4689 2323 1662 1 738 6194 1 1 3 chrUextra 20152503 20153179 -8851477 + SSU-rRNA_Dme rRNA rRNA 955 1629 -366 1 738 6150 6 0 0 chrUextra 20153279 20153958 -8850698 - DMRT1A LINE R1 -4348 835 157 1 738 5260 26 4 38 chrUextra 20154058 20154737 -8849919 + DOC2_DM LINE Jockey 756 1411 -3382 1 738 3401 170 12 12 chrUextra 20154837 20155516 -8849140 + SAR_DM Satellite Satellite 255 933 -539 1 738 5678 22 1 4 chrUextra 20155616 20156294 -8848362 - IDEFIX_I LTR Gypsy -2067 3561 2886 1 738 34 24 0 0 chrUextra 20156444 20156485 -8848171 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 2447 265 15 3 chrUextra 20157175 20157853 -8846803 - TOM_I LTR Gypsy -1590 4522 3837 1 738 5793 32 1 4 chrUextra 20157953 20158632 -8846024 - R1_DM LINE R1 -641 4715 4039 1 738 399 21 0 0 chrUextra 20158732 20158779 -8845877 + STALKER4_I LTR Gypsy 6484 6530 0 1 738 3405 51 2 14 chrUextra 20158779 20159218 -8845438 + STALKER4_LTR LTR Gypsy 1 392 -10 1 738 1108 39 0 42 chrUextra 20159222 20159411 -8845245 - DMSAT6 Satellite Satellite -66 404 224 1 738 3445 273 13 10 chrUextra 20159511 20160347 -8844309 - SAR_DM Satellite Satellite -442 1030 192 1 738 852 76 0 0 chrUextra 20160290 20160409 -8844247 + ARS406_DM Unknown Unknown 40 158 -195 1 738 2770 175 18 7 chrUextra 20160406 20160969 -8843687 - SAR_DM Satellite Satellite -558 914 346 1 738 5879 12 115 0 chrUextra 20161069 20161748 -8842908 + DOC LINE Jockey 3794 4550 -175 1 738 6099 0 0 3 chrUextra 20161848 20162527 -8842129 + R1_DM LINE R1 2627 3303 -2053 1 738 2720 16 6 0 chrUextra 20162627 20162938 -8841718 + FW_DM LINE Jockey 1881 2193 -2499 1 738 2964 19 5 24 chrUextra 20162937 20163306 -8841350 + FW_DM LINE Jockey 2600 2961 -1731 1 738 6107 3 0 0 chrUextra 20163406 20164085 -8840571 + DM176_I LTR Gypsy 1468 2146 -4274 1 738 6245 6 0 0 chrUextra 20164188 20164864 -8839792 - Gypsy6_I LTR Gypsy -259 6753 6078 1 738 6113 1 4 4 chrUextra 20165743 20166422 -8838234 - LSU-rRNA_Dme rRNA rRNA -2162 1738 1060 1 738 5159 22 2 0 chrUextra 20166555 20167141 -8837515 + PROTOP DNA P 1 587 -3893 1 738 350 39 0 0 chrUextra 20167150 20167201 -8837455 + PROTOP DNA P 1662 1712 -2768 1 738 2744 176 8 9 chrUextra 20167317 20167947 -8836709 - SAR_DM Satellite Satellite -649 823 195 1 738 799 95 0 0 chrUextra 20167854 20167980 -8836676 + ARS406_DM Unknown Unknown 1 126 -227 1 738 5780 1 0 1 chrUextra 20168080 20168759 -8835897 - ROO_I LTR Pao -3703 4553 3876 1 738 860 234 191 42 chrUextra 20168859 20169538 -8835118 - Gypsy12_LTR LTR Gypsy -463 1873 1094 1 738 2842 188 9 11 chrUextra 20169639 20170317 -8834339 + SAR_DM Satellite Satellite 1 677 -396 1 738 2416 190 54 16 chrUextra 20170418 20171096 -8833560 + SAR_DM Satellite Satellite 1 704 -208 1 738 5339 9 9 1 chrUextra 20171196 20171875 -8832781 + QUASIMODO_I LTR Gypsy 4348 5031 -1029 1 738 2332 98 21 22 chrUextra 20171975 20172654 -8832002 - DMSAT6 Satellite Satellite -3 677 1 1 738 935 27 26 26 chrUextra 20172754 20172906 -8831750 + NTS_DM Other Other 89 240 0 1 738 1828 8 17 13 chrUextra 20172906 20173145 -8831511 + NTS_DM Other Other 1 240 0 1 738 1734 21 17 17 chrUextra 20173145 20173385 -8831271 + NTS_DM Other Other 1 240 0 1 738 375 42 0 0 chrUextra 20173385 20173433 -8831223 + NTS_DM Other Other 1 48 -192 1 738 3740 11 2 0 chrUextra 20173535 20174009 -8830647 - Invader2_I LTR Gypsy -4117 475 1 1 738 1591 30 10 5 chrUextra 20174009 20174212 -8830444 - Invader2_LTR LTR Gypsy 0 266 63 1 738 970 288 47 44 chrUextra 20174344 20174986 -8829670 - BLOOD_I LTR Gypsy -4148 2465 1822 1 738 4970 21 2 0 chrUextra 20175091 20175709 -8828947 + STALKER4_I LTR Gypsy 4582 5200 -1330 1 738 495 62 0 0 chrUextra 20175705 20175770 -8828886 + STALKER4_I LTR Gypsy 5721 5785 -745 1 738 1763 10 0 0 chrUextra 20175870 20176074 -8828582 + Invader2_LTR LTR Gypsy 63 266 0 1 738 2893 24 0 0 chrUextra 20176074 20176449 -8828207 + Invader2_I LTR Gypsy 1 375 -4217 1 738 793 10 10 0 chrUextra 20176447 20176549 -8828107 + Invader2_I LTR Gypsy 623 725 -3867 1 738 5659 1 0 0 chrUextra 20176649 20177328 -8827328 + ROO_I LTR Pao 4636 5314 -2942 1 738 5339 41 1 1 chrUextra 20177428 20178107 -8826549 + R1_DM LINE R1 932 1610 -3746 1 738 5744 10 0 0 chrUextra 20178986 20179665 -8824991 + FW_DM LINE Jockey 610 1288 -3404 1 738 2448 0 0 0 chrUextra 20179765 20180051 -8824605 - ROO_I LTR Pao -4921 3335 3050 1 738 279 79 0 0 chrUextra 20180382 20180420 -8824236 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 738 621 0 0 71 chrUextra 20180544 20180628 -8824028 - CIRCE LINE Composite -4391 1965 1888 1 738 359 277 28 28 chrUextra 20180550 20180695 -8823961 - Gypsy12_I LTR Gypsy -1567 3979 3835 1 738 4016 24 0 31 chrUextra 20180704 20181223 -8823433 - CIRCE LINE Composite -4474 1882 1380 1 738 4258 77 4 6 chrUextra 20181323 20182002 -8822654 - Gypsy2_I LTR Gypsy -4074 2938 1713 1 738 3742 153 24 9 chrUextra 20182102 20182781 -8821875 - Gypsy5_I LTR Gypsy -3471 3038 2350 1 738 2850 171 18 11 chrUextra 20182882 20183546 -8821110 - SAR_DM Satellite Satellite -478 994 326 1 738 3228 20 0 0 chrUextra 20183660 20184101 -8820555 + QUASIMODO_I LTR Gypsy 5576 6016 -44 1 738 928 57 0 8 chrUextra 20184101 20184224 -8820432 - NINJA_LTR LTR Pao -1 316 195 1 738 701 25 521 0 chrUextra 20184222 20184339 -8820317 - NINJA_I LTR Pao -460 5551 5374 1 738 1957 186 5 7 chrUextra 20184445 20184888 -8819768 - SAR_DM Satellite Satellite -535 937 496 1 92 962 166 9 9 chrUextra 20184903 20185116 -8819540 - SAR_DM Satellite Satellite -928 544 332 1 739 5559 22 1 1 chrUextra 20185218 20185897 -8818759 - HETA LINE telomeric -3900 2181 1503 1 739 966 169 189 4 chrUextra 20185997 20186283 -8818373 + HMSBEAGLE_I LTR Gypsy 5481 5819 -710 1 739 1804 92 20 0 chrUextra 20186776 20187066 -8817590 - G5_DM LINE Jockey -416 4440 3972 1 739 586 212 0 0 chrUextra 20187555 20187692 -8816964 - ARS406_DM Unknown Unknown -216 137 1 1 739 2427 183 24 25 chrUextra 20187595 20188233 -8816423 + SAR_DM Satellite Satellite 191 827 -645 1 739 2424 71 16 21 chrUextra 20188334 20189013 -8815643 - DMSAT6 Satellite Satellite -72 676 1 1 739 1440 23 0 0 chrUextra 20189471 20189643 -8815013 + (TATTG)n Simple_repeat Simple_repeat 5 176 0 1 739 1113 14 7 14 chrUextra 20189647 20189792 -8814864 + (TTATA)n Simple_repeat Simple_repeat 4 147 0 1 739 5543 21 15 0 chrUextra 20190672 20191350 -8813306 - ACCORD2_I LTR Gypsy -6190 1022 335 1 739 2554 193 38 7 chrUextra 20191452 20192129 -8812527 - SAR_DM Satellite Satellite -519 953 256 1 739 5642 12 0 0 chrUextra 20192229 20192908 -8811748 + STALKER4_I LTR Gypsy 2105 2783 -3747 1 739 1770 272 15 23 chrUextra 20193022 20193635 -8811021 + Invader4_I LTR Gypsy 265 872 -1541 1 739 2354 202 36 6 chrUextra 20193787 20194428 -8810228 - SAR_DM Satellite Satellite -622 850 191 1 739 597 143 25 8 chrUextra 20194342 20194462 -8810194 + ARS406_DM Unknown Unknown 10 131 -222 1 739 5855 0 3 3 chrUextra 20194566 20195245 -8809411 + LSU-rRNA_Dme rRNA rRNA 3195 3873 -27 1 739 1826 71 4 0 chrUextra 20195769 20196024 -8808632 + Baggins1 LINE LOA 4791 5046 -407 1 739 5384 25 40 1 chrUextra 20196124 20196803 -8807853 - R1_DM LINE R1 -1618 3738 3034 1 739 5923 0 1 1 chrUextra 20196903 20197582 -8807074 + LSU-rRNA_Dme rRNA rRNA 2859 3537 -363 1 739 5800 9 3 0 chrUextra 20197682 20198361 -8806295 + MICROPIA_I LTR Gypsy 140 820 -3656 1 739 1239 24 0 6 chrUextra 20198506 20198671 -8805985 - NTS_DM Other Other -39 201 38 1 739 843 18 0 27 chrUextra 20198671 20198783 -8805873 - NTS_DM Other Other -107 133 25 1 739 1636 5 0 5 chrUextra 20198835 20199037 -8805619 - NTS_DM Other Other -39 201 1 1 739 638 10 39 39 chrUextra 20199037 20199140 -8805516 - NTS_DM Other Other 0 240 138 1 739 516 216 230 0 chrUextra 20199457 20199613 -8805043 - TIRANT_I LTR Gypsy -3752 3940 3777 1 739 21 82 0 0 chrUextra 20199765 20199814 -8804842 + AT_rich Low_complexity Low_complexity 1 49 0 1 739 407 70 0 0 chrUextra 20200019 20200076 -8804580 + ARS406_DM Unknown Unknown 133 189 -164 1 739 2794 179 12 12 chrUextra 20200029 20200697 -8803959 - SAR_DM Satellite Satellite -610 862 195 1 739 5716 1 0 1 chrUextra 20200818 20201477 -8803179 + LSU-rRNA_Dme rRNA rRNA 1788 2445 -1455 1 739 5285 40 12 6 chrUextra 20202356 20203035 -8801621 - CIRCE LINE Composite -2888 3468 2786 1 739 1759 5 0 5 chrUextra 20203135 20203344 -8801312 + ROVER-LTR_DM LTR Gypsy 160 367 0 1 739 3756 2 0 4 chrUextra 20203344 20203814 -8800842 + ROVER-I_DM LTR Gypsy 1 468 -6116 1 739 1543 241 52 47 chrUextra 20203915 20204593 -8800063 - SAR_DM Satellite Satellite -625 681 1 1 739 5787 3 0 0 chrUextra 20204693 20205372 -8799284 + IDEFIX_I LTR Gypsy 1759 2437 -3191 1 739 2742 174 17 11 chrUextra 20206251 20206902 -8797754 + SAR_DM Satellite Satellite 422 1076 -396 1 739 279 100 16 48 chrUextra 20206867 20206930 -8797726 - XDMR_DM Unknown Unknown 0 360 300 1 739 3034 174 15 6 chrUextra 20207035 20207706 -8796950 + SAR_DM Satellite Satellite 247 923 -549 1 739 2987 170 8 9 chrUextra 20207810 20208463 -8796193 + SAR_DM Satellite Satellite 425 1076 -396 1 739 2474 92 21 28 chrUextra 20208586 20209264 -8795392 - DMSAT6 Satellite Satellite -3 672 1 1 739 2340 31 3 3 chrUextra 20209419 20209711 -8794945 - PROTOP DNA P 0 4480 4189 1 739 1620 0 0 4 chrUextra 20210142 20210374 -8794282 + (TTCTC)n Simple_repeat Simple_repeat 1 230 0 1 739 743 144 34 6 chrUextra 20210374 20210401 -8794255 + polypyrimidine Low_complexity Low_complexity 154 180 0 1 739 984 91 28 11 chrUextra 20210401 20210578 -8794078 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 739 743 145 42 3 chrUextra 20210578 20210820 -8793836 + CT-rich Low_complexity Low_complexity 1 251 0 1 739 5275 38 0 0 chrUextra 20210920 20211598 -8793058 + HETA LINE telomeric 2576 3253 -2828 1 739 1657 18 18 18 chrUextra 20211698 20211927 -8792729 - NTS_DM Other Other -11 229 1 1 739 1408 20 20 20 chrUextra 20211927 20212130 -8792526 - NTS_DM Other Other 0 240 38 1 739 817 0 0 0 chrUextra 20212130 20212226 -8792430 - NTS_DM Other Other -107 133 38 1 739 808 19 9 27 chrUextra 20212226 20212337 -8792319 - NTS_DM Other Other -107 133 25 1 739 352 98 0 88 chrUextra 20212504 20213094 -8791562 + CT-rich Low_complexity Low_complexity 1 538 0 1 739 3014 171 15 7 chrUextra 20214032 20214708 -8789948 - SAR_DM Satellite Satellite -587 885 205 1 739 5866 4 0 0 chrUextra 20214810 20215488 -8789168 + R1_DM LINE R1 1967 2644 -2712 1 739 2692 184 25 21 chrUextra 20215588 20216264 -8788392 + SAR_DM Satellite Satellite 383 1061 -411 1 739 5530 21 0 0 chrUextra 20217144 20217822 -8786834 - BLOOD_I LTR Gypsy -4040 2573 1896 1 739 5529 34 0 0 chrUextra 20218700 20219377 -8785279 - R1_DM LINE R1 -3278 2078 1402 1 739 2657 173 19 17 chrUextra 20219478 20220155 -8784501 + SAR_DM Satellite Satellite 1 678 -411 1 739 4127 90 72 3 chrUextra 20220256 20220933 -8783723 + Stalker2_I LTR Gypsy 3365 4088 -3314 1 739 1063 264 55 49 chrUextra 20221034 20221711 -8782945 + SAR_DM Satellite Satellite 336 1016 -456 1 739 3048 179 16 19 chrUextra 20221813 20222490 -8782166 - SAR_DM Satellite Satellite -500 972 298 1 739 6186 0 4 3 chrUextra 20222590 20223268 -8781388 + SSU-rRNA_Dme rRNA rRNA 1130 1808 -187 1 739 3338 57 34 0 chrUextra 20223368 20223805 -8780851 + DOC3_DM LINE Jockey 998 1449 -3291 1 739 1080 284 2 8 chrUextra 20224148 20224542 -8780114 - TOM_I LTR Gypsy -1530 4582 4191 1 739 2450 7 0 0 chrUextra 20224542 20224824 -8779832 - STALKER4_I LTR Gypsy -424 6106 5825 1 739 4059 80 69 24 chrUextra 20224924 20225602 -8779054 + STALKER4_I LTR Gypsy 685 1393 -5137 1 739 2934 180 14 30 chrUextra 20225703 20226372 -8778284 + SAR_DM Satellite Satellite 462 1119 -353 1 739 6173 0 1 3 chrUextra 20226488 20227158 -8777498 + SSU-rRNA_Dme rRNA rRNA 694 1362 -633 1 739 2486 193 62 20 chrUextra 20227265 20227935 -8776721 - SAR_DM Satellite Satellite -720 698 1 1 739 4949 16 211 4 chrUextra 20228036 20228714 -8775942 - ROO_I LTR Pao -7336 920 103 1 739 3213 168 32 15 chrUextra 20228814 20229492 -8775164 + SAR_DM Satellite Satellite 346 1035 -437 1 739 5945 10 0 1 chrUextra 20229592 20230270 -8774386 + R1_DM LINE R1 230 906 -4450 1 739 4591 43 0 0 chrUextra 20230370 20230922 -8773734 - FW_DM LINE Jockey -4138 554 3 1 739 494 209 34 0 chrUextra 20230905 20231042 -8773614 + BURDOCK_I LTR Gypsy 4146 4246 -1614 1 739 6081 9 0 0 chrUextra 20231148 20231826 -8772830 - DMRT1B LINE R1 -2487 2696 2019 1 739 3160 184 15 10 chrUextra 20231926 20232603 -8772053 - SAR_DM Satellite Satellite -515 957 278 1 739 6151 3 0 0 chrUextra 20232704 20233382 -8771274 - R1_DM LINE R1 -1900 3456 2779 1 739 6290 1 0 0 chrUextra 20233482 20234160 -8770496 - Gypsy6_I LTR Gypsy -5393 1619 942 1 739 6230 4 0 0 chrUextra 20234260 20234938 -8769718 + DOC LINE Jockey 3128 3805 -920 1 739 5945 6 1 6 chrUextra 20235816 20236494 -8768162 + R1_DM LINE R1 3307 3981 -1375 1 739 5586 35 10 3 chrUextra 20236594 20237272 -8767384 - R1_DM LINE R1 -2042 3314 2632 1 739 5109 58 68 0 chrUextra 20237372 20238050 -8766606 - DM297_I LTR Gypsy -2629 3538 2815 1 739 380 214 87 10 chrUextra 20238203 20238307 -8766349 + DNAREP1_DM LINE Penelope 67 178 -416 1 739 1061 136 105 71 chrUextra 20238542 20238780 -8765876 + ROVER-LTR_DM LTR Gypsy 1 246 -121 1 739 5960 22 0 0 chrUextra 20238928 20239606 -8765050 - R1_DM LINE R1 -3195 2161 1484 1 739 3400 262 35 29 chrUextra 20242040 20243491 -8761165 - SAR_DM Satellite Satellite -399 1459 1 1 739 6045 1 0 0 chrUextra 20243596 20244274 -8760382 - ROO_I LTR Pao -2954 5302 4625 1 739 2491 99 8 54 chrUextra 20244378 20245048 -8759608 - DMSAT6 Satellite Satellite -127 639 1 1 739 6171 6 0 0 chrUextra 20245930 20246608 -8758048 + IVK_DM LINE I 2208 2885 -2517 1 739 1671 188 15 20 chrUextra 20246710 20247052 -8757604 - Gypsy12_LTR LTR Gypsy -1996 340 1 1 739 2670 75 0 3 chrUextra 20247051 20247386 -8757270 - Gypsy12_I LTR Gypsy 0 5546 5213 1 739 5991 1 0 4 chrUextra 20247486 20248164 -8756492 + ROO_I LTR Pao 2905 3579 -4677 1 739 5597 41 3 0 chrUextra 20249042 20249720 -8754936 + G2_DM LINE Jockey 1521 2200 -902 1 739 6217 6 1 0 chrUextra 20249820 20250498 -8754158 - DOC LINE Jockey -872 3853 3175 1 739 3237 165 9 32 chrUextra 20250599 20251275 -8753381 - SAR_DM Satellite Satellite -406 1066 407 1 739 5846 12 27 0 chrUextra 20251379 20252054 -8752602 + STALKER4_I LTR Gypsy 2179 2871 -3659 1 739 2531 3 0 7 chrUextra 20252154 20252442 -8752214 + BATUMI_I LTR Pao 7678 7963 0 1 739 2337 24 3 27 chrUextra 20252442 20252734 -8751922 + BATUMI_I LTR Pao 7002 7286 -677 1 739 844 28 0 0 chrUextra 20252724 20252832 -8751824 + G_DM LINE Jockey 638 745 -3601 1 739 6099 3 0 7 chrUextra 20252932 20253610 -8751046 + G2_DM LINE Jockey 1203 1875 -1227 1 739 6209 1 0 0 chrUextra 20253710 20254388 -8750268 + DOC LINE Jockey 769 1446 -3279 1 739 6312 1 0 0 chrUextra 20254488 20255166 -8749490 - Invader1_I LTR Gypsy -262 2924 2247 1 739 6107 1 0 1 chrUextra 20255285 20255944 -8748712 + LSU-rRNA_Dme rRNA rRNA 1788 2445 -1455 1 739 6215 3 0 0 chrUextra 20256045 20256722 -8747934 - Copia2_I LTR Copia -3438 724 48 1 739 928 47 0 16 chrUextra 20256822 20256951 -8747705 - NTS_DM Other Other -76 164 38 1 739 876 0 0 0 chrUextra 20256951 20257047 -8747609 - NTS_DM Other Other -107 133 38 1 739 898 9 9 27 chrUextra 20257047 20257158 -8747498 - NTS_DM Other Other -107 133 25 1 739 21 57 0 0 chrUextra 20257184 20257219 -8747437 + AT_rich Low_complexity Low_complexity 1 35 0 1 739 1350 18 0 6 chrUextra 20257219 20257384 -8747272 - NTS_DM Other Other -39 201 38 1 739 936 9 0 27 chrUextra 20257384 20257496 -8747160 - NTS_DM Other Other -107 133 25 1 739 5452 49 25 3 chrUextra 20257600 20258278 -8746378 - R1_DM LINE R1 -3607 1749 1057 1 739 6288 1 0 1 chrUextra 20258378 20259056 -8745600 - LSU-rRNA_Dme rRNA rRNA -1396 2504 1828 1 739 991 73 6 20 chrUextra 20259160 20259792 -8744864 + RSP Satellite Satellite 1 623 0 1 739 1989 0 5 5 chrUextra 20259934 20260157 -8744499 + QUASIMODO_LTR LTR Gypsy 436 658 0 1 739 3951 2 2 26 chrUextra 20260157 20260612 -8744044 + QUASIMODO_I LTR Gypsy 1 444 -5616 1 739 1342 17 151 0 chrUextra 20260712 20260864 -8743792 - QUASIMODO_LTR LTR Gypsy -452 206 52 1 739 183 129 0 0 chrUextra 20260864 20260895 -8743761 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 739 1342 17 151 0 chrUextra 20260895 20260921 -8743735 - QUASIMODO_LTR LTR Gypsy -607 51 2 1 739 236 198 137 108 chrUextra 20261288 20261390 -8743266 + MICROPIA_I LTR Gypsy 1 105 -4371 1 739 6243 0 0 0 chrUextra 20261490 20262168 -8742488 - DMRT1B LINE R1 -1592 3591 2914 1 739 5196 58 3 4 chrUextra 20262268 20262943 -8741713 - BATUMI_I LTR Pao -2760 5154 4315 1 739 1158 149 0 3 chrUextra 20263046 20263719 -8740937 + (TA)n Simple_repeat Simple_repeat 1 670 0 1 739 675 0 0 0 chrUextra 20263824 20263897 -8740759 - NTS_DM Other Other -130 110 38 1 739 906 9 0 35 chrUextra 20263897 20264010 -8740646 - NTS_DM Other Other -107 133 25 1 739 22 56 0 0 chrUextra 20264037 20264073 -8740583 + AT_rich Low_complexity Low_complexity 1 36 0 1 739 278 176 0 19 chrUextra 20264086 20264138 -8740518 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 739 268 196 0 19 chrUextra 20264169 20264221 -8740435 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 739 268 196 0 19 chrUextra 20264261 20264313 -8740343 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 739 820 0 0 0 chrUextra 20264414 20264502 -8740154 - LSU-rRNA_Dme rRNA rRNA 0 3900 3813 1 739 2047 101 88 0 chrUextra 20264602 20264899 -8739757 - Gypsy12_I LTR Gypsy -759 4787 4465 1 739 2315 113 0 12 chrUextra 20264896 20265219 -8739437 - Gypsy12_I LTR Gypsy -3725 1821 1503 1 739 423 74 0 0 chrUextra 20265226 20265280 -8739376 - Gypsy12_I LTR Gypsy -3992 1554 1501 1 739 2913 92 77 112 chrUextra 20265380 20266016 -8738640 + PROTOP_B DNA P 540 1153 0 1 739 543 290 26 10 chrUextra 20266308 20266544 -8738112 + HMSBEAGLE_I LTR Gypsy 4106 4320 -2209 1 739 283 232 0 0 chrUextra 20266576 20266645 -8738011 + HMSBEAGLE_I LTR Gypsy 4379 4447 -2082 1 739 443 209 0 0 chrUextra 20266745 20266836 -8737820 - PROTOP_B DNA P -953 200 110 1 739 5887 15 0 0 chrUextra 20266936 20267612 -8737044 + STALKER4_I LTR Gypsy 2826 3501 -3029 1 739 5455 11 4 47 chrUextra 20267714 20268392 -8736264 + QUASIMODO_I LTR Gypsy 1581 2229 -3831 1 739 3131 181 25 9 chrUextra 20268492 20269170 -8735486 - SAR_DM Satellite Satellite -505 967 279 1 739 562 41 68 0 chrUextra 20269272 20269345 -8735311 - R1_DM LINE R1 -5278 78 1 1 739 2670 22 97 0 chrUextra 20269378 20269948 -8734708 - R1_DM LINE R1 0 5356 4732 1 739 3373 176 9 7 chrUextra 20270049 20270726 -8733930 - SAR_DM Satellite Satellite -549 923 246 1 739 3166 174 21 9 chrUextra 20270835 20271504 -8733152 - SAR_DM Satellite Satellite -396 1076 400 1 739 1092 74 20 0 chrUextra 20271604 20271753 -8732903 - R1_DM LINE R1 -5204 152 1 1 739 997 27 0 0 chrUextra 20271786 20271898 -8732758 - R1_DM LINE R1 0 5356 5245 1 739 3299 23 5 0 chrUextra 20271897 20272282 -8732374 - R1_DM LINE R1 -290 5066 4680 1 739 2982 62 0 5 chrUextra 20273986 20274374 -8730282 + BATUMI_I LTR Pao 7578 7963 0 1 739 1698 52 0 27 chrUextra 20274396 20274615 -8730041 + BATUMI_LTR LTR Pao 32 244 -28 1 739 23 68 0 0 chrUextra 20274720 20274764 -8729892 + AT_rich Low_complexity Low_complexity 1 44 0 1 739 29 60 0 0 chrUextra 20274810 20274860 -8729796 + AT_rich Low_complexity Low_complexity 1 50 0 1 739 1624 42 5 0 chrUextra 20275202 20275394 -8729262 - PROTOP DNA P 0 4480 4288 1 739 6197 0 1 4 chrUextra 20275494 20276172 -8728484 - SSU-rRNA_Dme rRNA rRNA -480 1515 840 1 739 2364 186 17 78 chrUextra 20276272 20276939 -8727717 + HETA LINE telomeric 3267 3832 -2249 1 739 3308 178 12 12 chrUextra 20277050 20277728 -8726928 + SAR_DM Satellite Satellite 256 933 -539 1 739 5672 12 18 0 chrUextra 20277828 20278506 -8726150 - Invader2_I LTR Gypsy -3825 767 78 1 739 28 48 0 0 chrUextra 20278791 20278833 -8725823 + AT_rich Low_complexity Low_complexity 1 42 0 1 739 32 0 0 0 chrUextra 20279162 20279194 -8725462 + AT_rich Low_complexity Low_complexity 1 32 0 1 739 3403 164 8 8 chrUextra 20279396 20280061 -8724595 + SAR_DM Satellite Satellite 369 1033 -439 1 739 2439 105 16 36 chrUextra 20280162 20280836 -8723820 - DMSAT6 Satellite Satellite -32 660 1 1 739 34 24 0 0 chrUextra 20281378 20281419 -8723237 + AT_rich Low_complexity Low_complexity 1 41 0 1 739 5776 4 0 0 chrUextra 20281718 20282396 -8722260 - ACCORD_I LTR Gypsy -311 5977 5300 1 739 3025 179 8 11 chrUextra 20282497 20283151 -8721505 + SAR_DM Satellite Satellite 425 1076 -396 1 739 5804 18 0 7 chrUextra 20283274 20283952 -8720704 - FW_DM LINE Jockey -2258 2434 1762 1 739 732 314 69 47 chrUextra 20284830 20285494 -8719162 + MDG1_I LTR Gypsy 2101 2779 -3817 1 739 5795 24 0 0 chrUextra 20285608 20286286 -8718370 - NINJA_I LTR Pao -3900 2111 1434 1 739 1964 186 7 6 chrUextra 20287164 20287842 -8716814 + SAR_DM Satellite Satellite 1 678 -548 1 739 4380 0 0 0 chrUextra 20287942 20288416 -8716240 - HOBO DNA hAT -2542 474 1 1 739 5855 12 0 0 chrUextra 20288720 20289398 -8715258 - ROO_I LTR Pao -4865 3391 2714 1 739 1130 0 8 0 chrUextra 20289498 20289626 -8715030 - R1_DM LINE R1 -5227 129 1 1 739 4963 2 0 2 chrUextra 20289626 20290176 -8714480 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2084 1 739 4857 3 3 43 chrUextra 20290276 20290879 -8713777 - LSU-rRNA_Dme rRNA rRNA -3321 579 1 1 739 21 95 0 0 chrUextra 20290891 20290954 -8713702 + AT_rich Low_complexity Low_complexity 1 63 0 1 739 1857 179 6 6 chrUextra 20291054 20291732 -8712924 + SAR_DM Satellite Satellite 1 678 -558 1 739 2919 3 0 0 chrUextra 20291832 20292151 -8712505 - LSU-rRNA_Dme rRNA rRNA -1794 2106 1788 1 739 2751 0 6 3 chrUextra 20292195 20292510 -8712146 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1473 1 739 1523 10 10 5 chrUextra 20292610 20292804 -8711852 + DOC LINE Jockey 4531 4725 0 1 739 277 106 0 21 chrUextra 20292993 20293041 -8711615 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 739 372 49 65 16 chrUextra 20293063 20293125 -8711531 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 739 771 186 0 7 chrUextra 20293124 20293270 -8711386 - DMLTR5 LTR Gypsy 0 266 122 1 739 932 146 6 30 chrUextra 20293397 20293566 -8711090 - TART LINE telomeric -7328 7149 6985 1 739 1848 150 180 40 chrUextra 20293566 20294066 -8710590 - HETA LINE telomeric 0 6081 5580 1 739 3257 169 7 14 chrUextra 20294166 20294844 -8709812 + SAR_DM Satellite Satellite 1 673 -411 1 739 5712 0 2 5 chrUextra 20294985 20295622 -8709034 - SSU-rRNA_Dme rRNA rRNA 0 1995 1361 1 739 6126 0 0 4 chrUextra 20295722 20296400 -8708256 - BEL_I LTR Pao -2855 2549 1875 1 739 2356 188 46 7 chrUextra 20296502 20297087 -8707569 - SAR_DM Satellite Satellite -532 940 333 1 739 569 131 10 0 chrUextra 20297077 20297176 -8707480 + ARS406_DM Unknown Unknown 50 149 -204 1 739 3165 171 14 11 chrUextra 20297279 20297942 -8706714 - SAR_DM Satellite Satellite -482 990 326 1 739 309 51 0 0 chrUextra 20298562 20298601 -8706055 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 739 422 342 25 44 chrUextra 20298845 20299160 -8705496 + Gypsy6_I LTR Gypsy 1476 1784 -5228 1 739 5721 25 1 1 chrUextra 20299612 20300290 -8704366 - R1_DM LINE R1 -1023 4333 3656 1 739 4623 61 22 1 chrUextra 20300390 20301068 -8703588 + STALKER4_I LTR Gypsy 5819 6510 -20 1 739 1676 178 54 9 chrUextra 20301171 20301843 -8702813 - SAR_DM Satellite Satellite -511 702 1 1 739 21 89 0 0 chrUextra 20302242 20302298 -8702358 + AT_rich Low_complexity Low_complexity 1 56 0 1 739 6209 1 1 0 chrUextra 20302724 20303402 -8701254 - LSU-rRNA_Dme rRNA rRNA -158 3742 3064 1 739 5855 12 19 7 chrUextra 20303502 20304180 -8700476 - Gypsy4_I LTR Gypsy -3977 2311 1626 1 739 6157 3 0 0 chrUextra 20304280 20304958 -8699698 + GTWIN_I LTR Gypsy 497 1174 -5247 1 739 3245 174 18 7 chrUextra 20305841 20306513 -8698143 + SAR_DM Satellite Satellite 352 1030 -442 1 739 3195 183 7 7 chrUextra 20306614 20307292 -8697364 - SAR_DM Satellite Satellite -539 933 256 1 739 5999 1 0 0 chrUextra 20307392 20308070 -8696586 + ROO_I LTR Pao 4831 5508 -2748 1 739 6060 1 0 0 chrUextra 20308170 20308848 -8695808 - ROO_I LTR Pao -1032 7224 6547 1 739 3255 160 30 16 chrUextra 20308948 20309626 -8695030 - SAR_DM Satellite Satellite -453 1019 333 1 739 6054 0 1 0 chrUextra 20309726 20310404 -8694252 + Invader3_I LTR Gypsy 2095 2773 -2115 1 739 5876 1 0 1 chrUextra 20310504 20311182 -8693474 - DM176_I LTR Gypsy -1333 5087 4411 1 739 3020 172 16 19 chrUextra 20311287 20311957 -8692699 - SAR_DM Satellite Satellite -512 960 293 1 739 505 332 16 45 chrUextra 20312244 20312556 -8692100 + HMSBEAGLE_I LTR Gypsy 2644 2946 -3583 1 739 5605 34 3 0 chrUextra 20312838 20313516 -8691140 - MDG3_I LTR Gypsy -3193 1793 1114 1 739 3161 170 30 9 chrUextra 20313617 20314286 -8690370 - SAR_DM Satellite Satellite -441 1031 349 1 739 6014 0 1 0 chrUextra 20314394 20315072 -8689584 - ROO_I LTR Pao -2117 6139 5461 1 739 5954 0 0 1 chrUextra 20315172 20315850 -8688806 - LSU-rRNA_Dme rRNA rRNA -2871 1029 353 1 92 6054 1 3 3 chrUextra 20315950 20316628 -8688028 - SSU-rRNA_Dme rRNA rRNA -412 1583 906 1 740 3311 173 7 7 chrUextra 20316728 20317404 -8687252 - SAR_DM Satellite Satellite -428 1044 369 1 740 30 0 0 0 chrUextra 20317565 20317595 -8687061 + AT_rich Low_complexity Low_complexity 1 30 0 1 740 28 48 0 0 chrUextra 20317923 20317965 -8686691 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 311 189 32 43 chrUextra 20318284 20318378 -8686278 + XDMR_DM Unknown Unknown 261 353 -7 1 740 2647 197 9 21 chrUextra 20318299 20318962 -8685694 - SAR_DM Satellite Satellite -353 1119 465 1 740 6013 9 0 0 chrUextra 20319062 20319740 -8684916 - R1_DM LINE R1 -2271 3085 2408 1 740 1068 298 27 27 chrUextra 20319840 20320313 -8684343 - Copia2_I LTR Copia -2212 1950 1386 1 740 6208 1 0 0 chrUextra 20320618 20321296 -8683360 - NOMAD_I LTR Gypsy -2829 3743 3066 1 740 5863 21 1 0 chrUextra 20321396 20322074 -8682582 - R1_DM LINE R1 -2824 2532 1854 1 740 5811 9 0 1 chrUextra 20322175 20322852 -8681804 + Invader2_I LTR Gypsy 3313 3988 -604 1 740 4800 14 34 0 chrUextra 20322952 20323542 -8681114 - QUASIMODO_I LTR Gypsy -1956 4104 3495 1 740 751 11 11 0 chrUextra 20323540 20323629 -8681027 + BS2 LINE Jockey 957 1046 -3675 1 740 6067 0 1 1 chrUextra 20323730 20324408 -8680248 + STALKER4_I LTR Gypsy 3594 4271 -2259 1 740 4670 75 112 0 chrUextra 20324508 20325186 -8679470 + TART LINE telomeric 983 1736 -12741 1 740 3831 0 2 0 chrUextra 20325286 20325704 -8678952 + SSU-rRNA_Dme rRNA rRNA 1577 1995 0 1 740 6066 3 18 0 chrUextra 20326064 20326742 -8677914 + FW_DM LINE Jockey 3434 4123 -569 1 740 2955 193 16 23 chrUextra 20326843 20327519 -8677137 - SAR_DM Satellite Satellite -645 670 1 1 740 2365 95 6 43 chrUextra 20327619 20328296 -8676360 - DMSAT6 Satellite Satellite -89 651 1 1 740 5732 19 6 3 chrUextra 20328396 20329073 -8675583 - R1_DM LINE R1 -1436 3920 3242 1 740 1578 0 20 15 chrUextra 20329173 20329373 -8675283 + NTS_DM Other Other 40 240 0 1 740 1940 0 17 13 chrUextra 20329373 20329612 -8675044 + NTS_DM Other Other 1 240 0 1 740 1874 13 17 13 chrUextra 20329612 20329850 -8674806 + NTS_DM Other Other 1 239 -1 1 740 1276 22 22 22 chrUextra 20329950 20330135 -8674521 + NTS_DM Other Other 56 240 0 1 740 1908 8 17 13 chrUextra 20330135 20330374 -8674282 + NTS_DM Other Other 1 240 0 1 740 1904 8 17 13 chrUextra 20330374 20330613 -8674043 + NTS_DM Other Other 1 240 0 1 740 2872 197 15 23 chrUextra 20330728 20331404 -8673252 - SAR_DM Satellite Satellite -645 670 1 1 740 21 89 0 0 chrUextra 20331830 20331886 -8672770 + AT_rich Low_complexity Low_complexity 1 56 0 1 740 2515 0 4 0 chrUextra 20331905 20332181 -8672475 - SSU-rRNA_Dme rRNA rRNA 0 1995 1719 1 740 5231 61 1 9 chrUextra 20332281 20332958 -8671698 + BATUMI_I LTR Pao 3519 4190 -3773 1 740 985 0 0 0 chrUextra 20333058 20333172 -8671484 - R1_DM LINE R1 -4391 965 852 1 740 419 21 0 0 chrUextra 20333169 20333216 -8671440 - LSU-rRNA_Dme rRNA rRNA -1214 2686 2640 1 740 2897 9 0 0 chrUextra 20333214 20333532 -8671124 - R1_DM LINE R1 0 5356 5039 1 740 1793 5 0 0 chrUextra 20333542 20333735 -8670921 - R1_DM LINE R1 0 5356 5164 1 740 3708 51 49 0 chrUextra 20333837 20334504 -8670152 + PROTOP DNA P 203 766 -339 1 740 3030 39 2 104 chrUextra 20334612 20335093 -8669563 + ROO_I LTR Pao 715 1146 -7110 1 740 3035 110 2 21 chrUextra 20335389 20335854 -8668802 - TART LINE telomeric -7269 7208 6753 1 740 622 232 22 44 chrUextra 20335848 20336028 -8668628 - TART LINE telomeric -1219 13258 13083 1 740 767 120 8 0 chrUextra 20336166 20336291 -8668365 - ARS406_DM Unknown Unknown -226 127 2 1 740 3177 174 12 9 chrUextra 20336186 20336842 -8667814 + SAR_DM Satellite Satellite 180 837 -635 1 740 726 211 6 34 chrUextra 20336943 20337120 -8667536 - TART_B1 LINE telomeric -10088 566 395 1 740 1198 124 262 34 chrUextra 20337121 20337388 -8667268 - TART LINE telomeric -10539 3938 3611 1 740 1628 84 0 13 chrUextra 20337390 20337620 -8667036 - TART LINE telomeric -6448 8029 7803 1 740 2321 103 76 12 chrUextra 20338514 20339171 -8665485 - DMSAT6 Satellite Satellite -7 698 1 1 740 1878 194 124 51 chrUextra 20339274 20339934 -8664722 + HETA LINE telomeric 5098 5739 -342 1 740 3197 171 12 11 chrUextra 20340051 20340701 -8663955 + SAR_DM Satellite Satellite 377 1027 -445 1 740 6149 1 0 1 chrUextra 20340828 20341505 -8663151 - R1_DM LINE R1 -1642 3714 3039 1 740 2868 197 25 9 chrUextra 20341605 20342277 -8662379 - SAR_DM Satellite Satellite -610 862 180 1 740 6063 9 0 0 chrUextra 20342382 20343059 -8661597 + ROO_I LTR Pao 2696 3372 -4884 1 740 28 48 0 0 chrUextra 20343390 20343432 -8661224 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 32 0 0 0 chrUextra 20343760 20343792 -8660864 + AT_rich Low_complexity Low_complexity 1 32 0 1 740 2680 199 8 15 chrUextra 20343940 20344600 -8660056 - SAR_DM Satellite Satellite -683 655 1 1 740 5661 42 0 9 chrUextra 20344713 20345390 -8659266 - R1_DM LINE R1 -3369 1987 1317 1 740 3444 10 0 3 chrUextra 20345490 20345882 -8658774 + FW_DM LINE Jockey 4301 4691 -1 1 740 938 91 0 12 chrUextra 20345944 20346108 -8658548 + RSP Satellite Satellite 1 162 -1 1 740 970 65 6 19 chrUextra 20346267 20346944 -8657712 + RSP Satellite Satellite 1 668 0 1 740 5166 63 3 12 chrUextra 20347044 20347721 -8656935 + BATUMI_I LTR Pao 3061 3731 -4232 1 740 2927 38 16 5 chrUextra 20348131 20348498 -8656158 + CIRCE LINE Composite 4981 5351 -1005 1 740 774 0 0 0 chrUextra 20348598 20348684 -8655972 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1 740 3446 161 10 15 chrUextra 20349375 20350049 -8654607 - SAR_DM Satellite Satellite -449 1023 353 1 740 6032 12 6 0 chrUextra 20350152 20350829 -8653827 - FW_DM LINE Jockey -197 4495 3815 1 740 6155 6 0 0 chrUextra 20351706 20352383 -8652273 + R1_DM LINE R1 3982 4658 -698 1 740 2548 94 25 22 chrUextra 20352484 20353159 -8651497 + DMSAT6 Satellite Satellite 1 677 -74 1 740 1869 183 16 8 chrUextra 20353260 20353937 -8650719 + SAR_DM Satellite Satellite 1 683 -749 1 740 2888 82 162 4 chrUextra 20354037 20354488 -8650168 + BATUMI_I LTR Pao 1050 1571 -6392 1 740 1686 36 9 26 chrUextra 20354487 20354714 -8649942 + BATUMI_I LTR Pao 1920 2142 -5821 1 740 5854 22 1 1 chrUextra 20354814 20355491 -8649165 + STALKER4_I LTR Gypsy 1781 2457 -4073 1 740 2242 166 29 67 chrUextra 20356394 20357045 -8647611 - HETA LINE telomeric -5402 679 35 1 740 4660 41 143 1 chrUextra 20357145 20357822 -8646834 + R1_DM LINE R1 1055 1827 -3529 1 740 6074 1 3 0 chrUextra 20357922 20358599 -8646057 - ROO_I LTR Pao -4267 3989 3311 1 740 1878 269 22 39 chrUextra 20358709 20359375 -8645281 - FROGGER_I LTR Copia -40 2037 1383 1 740 6195 1 0 1 chrUextra 20359476 20360150 -8644506 - FW_DM LINE Jockey -2258 2434 1762 1 740 1310 104 148 0 chrUextra 20360253 20360570 -8644086 + STALKER4_I LTR Gypsy 3210 3573 -2957 1 740 24 32 0 0 chrUextra 20360588 20360619 -8644037 + AT_rich Low_complexity Low_complexity 1 31 0 1 740 267 215 11 151 chrUextra 20360676 20360769 -8643887 + DM176_LTR LTR Gypsy 190 269 -238 1 740 4199 19 0 0 chrUextra 20361030 20361503 -8643153 + R1_DM LINE R1 4884 5356 0 1 740 1356 58 6 0 chrUextra 20361535 20361707 -8642949 + R1_DM LINE R1 1 173 -5183 1 740 5363 30 3 2 chrUextra 20361807 20362441 -8642215 - PROTOP DNA P -3845 635 1 1 740 2572 85 42 18 chrUextra 20362585 20363255 -8641401 + DMSAT6 Satellite Satellite 1 686 -97 1 740 6015 19 0 0 chrUextra 20363361 20364037 -8640619 + G_DM LINE Jockey 2976 3651 -695 1 740 207 170 0 0 chrUextra 20364138 20364185 -8640471 + (CTATT)n Simple_repeat Simple_repeat 3 49 0 1 740 6303 3 0 0 chrUextra 20364915 20365592 -8639064 + R2_DM LINE R2 2775 3451 -156 1 740 6029 13 0 4 chrUextra 20365692 20366369 -8638287 + FW_DM LINE Jockey 2073 2746 -1946 1 740 1100 24 0 0 chrUextra 20366469 20366595 -8638061 + Copia2_LTR_DM LTR Copia 73 198 0 1 740 4979 9 0 0 chrUextra 20366595 20367146 -8637510 + Copia2_I LTR Copia 1 551 -3611 1 740 5996 15 0 0 chrUextra 20367246 20367923 -8636733 + STALKER4_I LTR Gypsy 4546 5222 -1308 1 740 1232 14 0 0 chrUextra 20368023 20368162 -8636494 - NTS_DM Other Other -101 139 1 1 740 1878 21 17 17 chrUextra 20368162 20368402 -8636254 - NTS_DM Other Other 0 240 1 1 740 1874 21 17 17 chrUextra 20368402 20368642 -8636014 - NTS_DM Other Other 0 240 1 1 740 5876 31 1 0 chrUextra 20368800 20369477 -8635179 - MAX_I LTR Pao -3066 4848 4171 1 740 5751 32 0 0 chrUextra 20369577 20370254 -8634402 + MDG1_I LTR Gypsy 2003 2679 -3917 1 740 6017 15 0 0 chrUextra 20370354 20371031 -8633625 + FW_DM LINE Jockey 2260 2936 -1756 1 740 6287 1 1 1 chrUextra 20371131 20371808 -8632848 - LSU-rRNA_Dme rRNA rRNA -279 3621 2945 1 740 1927 190 14 8 chrUextra 20371912 20372585 -8632071 + SAR_DM Satellite Satellite 1 677 -569 1 740 3283 164 9 15 chrUextra 20372685 20373346 -8631310 - SAR_DM Satellite Satellite -490 982 326 1 740 1250 19 6 12 chrUextra 20373462 20373624 -8631032 + NTS_DM Other Other 41 201 -39 1 740 21 57 0 0 chrUextra 20373624 20373659 -8630997 + AT_rich Low_complexity Low_complexity 1 35 0 1 740 898 9 9 27 chrUextra 20373685 20373796 -8630860 + NTS_DM Other Other 25 133 -107 1 740 876 0 0 0 chrUextra 20373796 20373892 -8630764 + NTS_DM Other Other 38 133 -107 1 740 1526 20 20 20 chrUextra 20373892 20374095 -8630561 + NTS_DM Other Other 38 240 0 1 740 366 45 0 0 chrUextra 20374095 20374139 -8630517 + NTS_DM Other Other 1 44 -196 1 740 6322 0 0 1 chrUextra 20374239 20374916 -8629740 + LSU-rRNA_Dme rRNA rRNA 2549 3224 -676 1 740 549 228 14 14 chrUextra 20375016 20375154 -8629502 + HETRP_DM Satellite Satellite 1548 1685 -187 1 740 766 178 13 26 chrUextra 20375312 20375468 -8629188 + HETRP_DM Satellite Satellite 1529 1682 -190 1 740 400 138 0 0 chrUextra 20375617 20375675 -8628981 + HETRP_DM Satellite Satellite 1529 1586 -286 1 740 6019 4 1 1 chrUextra 20375793 20376470 -8628186 - G_DM LINE Jockey -1959 2387 1711 1 740 2788 181 10 9 chrUextra 20377348 20378024 -8626632 + SAR_DM Satellite Satellite 1 676 -677 1 740 428 314 57 42 chrUextra 20378202 20378800 -8625856 + BLOOD_I LTR Gypsy 1456 2062 -4551 1 740 5988 1 1 1 chrUextra 20378901 20379578 -8625078 - ZAM_I LTR Gypsy -2053 5437 4761 1 740 228 36 0 0 chrUextra 20379678 20379706 -8624950 - PROTOP_B DNA P -1052 101 74 1 740 6121 10 1 0 chrUextra 20380458 20381132 -8623524 - Gypsy2_I LTR Gypsy -4445 1690 1016 1 740 2873 191 51 30 chrUextra 20381232 20381909 -8622747 + SAR_DM Satellite Satellite 1 691 -396 1 740 1498 71 119 0 chrUextra 20382009 20382219 -8622437 - Gypsy12_I LTR Gypsy -847 4699 4465 1 740 2305 110 0 15 chrUextra 20382216 20382540 -8622116 - Gypsy12_I LTR Gypsy -3725 1821 1503 1 740 1015 79 14 0 chrUextra 20382547 20382686 -8621970 - Gypsy12_I LTR Gypsy -3992 1554 1414 1 740 4646 30 0 22 chrUextra 20382786 20383338 -8621318 + CIRCE LINE Composite 2375 2914 -3442 1 740 1077 16 0 8 chrUextra 20383339 20383463 -8621193 + CIRCE LINE Composite 3035 3157 -3199 1 740 3267 175 8 9 chrUextra 20383583 20384239 -8620417 - SAR_DM Satellite Satellite -396 1076 422 1 740 6012 9 0 1 chrUextra 20384340 20385017 -8619639 - DMRT1B LINE R1 -2234 2949 2274 1 740 1767 294 28 27 chrUextra 20385117 20385794 -8618862 + Gypsy_DS LTR Gypsy 643 1902 -5620 1 740 2076 187 34 10 chrUextra 20385894 20385921 -8618735 - SAR_DM Satellite Satellite -801 693 659 1 740 1060 86 0 0 chrUextra 20385921 20386072 -8618584 + ARS406_DM Unknown Unknown 1 151 -202 1 740 2076 187 34 10 chrUextra 20386072 20386571 -8618085 - SAR_DM Satellite Satellite -801 658 1 1 740 328 239 92 0 chrUextra 20386682 20386899 -8617757 + (CAAGA)n Simple_repeat Simple_repeat 1 236 0 1 740 330 162 117 12 chrUextra 20387032 20387194 -8617462 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 1 740 5982 19 1 0 chrUextra 20387448 20388125 -8616531 - R1_DM LINE R1 -693 4663 3986 1 740 221 208 38 0 chrUextra 20389606 20389659 -8614997 + (CATA)n Simple_repeat Simple_repeat 1 55 0 1 740 6083 0 1 4 chrUextra 20389779 20390456 -8614200 + SSU-rRNA_Dme rRNA rRNA 1060 1734 -261 1 740 3079 171 18 14 chrUextra 20390562 20391225 -8613431 + SAR_DM Satellite Satellite 230 895 -577 1 740 4897 22 61 0 chrUextra 20391333 20392010 -8612646 - R1_DM LINE R1 -1786 3570 2853 1 740 2375 207 61 21 chrUextra 20392889 20393563 -8611093 + SAR_DM Satellite Satellite 1 701 -216 1 740 6029 3 0 3 chrUextra 20393664 20394341 -8610315 + R1_DM LINE R1 4644 5318 -38 1 740 3083 186 6 7 chrUextra 20394441 20395118 -8609538 - SAR_DM Satellite Satellite -588 884 209 1 740 1222 7 0 0 chrUextra 20395351 20395486 -8609170 - 5S_DM RNA RNA 0 135 1 1 740 1222 7 0 0 chrUextra 20395717 20395852 -8608804 - 5S_DM RNA RNA 0 135 1 1 740 5768 24 1 0 chrUextra 20395995 20396672 -8607984 - FW_DM LINE Jockey -3860 832 155 1 740 1461 214 45 56 chrUextra 20396780 20397419 -8607237 + SAR_DM Satellite Satellite 1 631 -353 1 740 255 150 0 0 chrUextra 20397409 20397449 -8607207 - XDMR_DM Unknown Unknown -280 80 41 1 740 5857 21 1 1 chrUextra 20397549 20398224 -8606432 - BATUMI_I LTR Pao -2430 5533 4859 1 740 3251 168 10 10 chrUextra 20398330 20399003 -8605653 - SAR_DM Satellite Satellite -411 1061 389 1 740 1439 6 0 11 chrUextra 20399103 20399278 -8605378 - STALKER4_LTR LTR Gypsy -229 173 1 1 740 3889 18 10 2 chrUextra 20399278 20399780 -8604876 - STALKER4_I LTR Gypsy 0 6530 6025 1 740 4709 14 58 0 chrUextra 20399880 20400557 -8604099 + STALKER4_I LTR Gypsy 1514 2229 -4301 1 740 2784 185 9 27 chrUextra 20400657 20401334 -8603322 - SAR_DM Satellite Satellite -603 869 205 1 740 3588 12 0 0 chrUextra 20401434 20401852 -8602804 + FW_DM LINE Jockey 4275 4692 0 1 740 1123 230 0 4 chrUextra 20401853 20402106 -8602550 - TAHRE LINE telomeric -9343 1120 869 1 740 1621 143 117 81 chrUextra 20402211 20402888 -8601768 - MAX_I LTR Pao -6399 1515 938 1 740 3213 176 6 7 chrUextra 20402989 20403665 -8600991 - SAR_DM Satellite Satellite -593 879 205 1 740 3185 178 6 13 chrUextra 20403765 20404442 -8600214 - SAR_DM Satellite Satellite -398 1074 403 1 740 34 24 0 0 chrUextra 20404614 20404655 -8600001 + AT_rich Low_complexity Low_complexity 1 41 0 1 740 21 95 0 0 chrUextra 20404868 20404931 -8599725 + AT_rich Low_complexity Low_complexity 1 63 0 1 740 2072 4 0 91 chrUextra 20404943 20405219 -8599437 + LSU-rRNA_Dme rRNA rRNA 1 251 -3649 1 740 1310 6 90 0 chrUextra 20405712 20405868 -8598788 + PROTOP_B DNA P 1 170 -983 1 740 583 177 0 46 chrUextra 20405866 20405996 -8598660 + TART LINE telomeric 3548 3671 -10806 1 740 6137 1 0 1 chrUextra 20406096 20406773 -8597883 - LSU-rRNA_Dme rRNA rRNA -1428 2472 1797 1 740 5588 49 3 0 chrUextra 20406873 20407550 -8597106 + DIVER_I LTR Pao 93 771 -4872 1 740 997 0 0 0 chrUextra 20407650 20407760 -8596896 - NTS_DM Other Other -130 110 1 1 740 1912 4 17 13 chrUextra 20407760 20407999 -8596657 - NTS_DM Other Other 0 240 1 1 740 1918 4 17 13 chrUextra 20407999 20408238 -8596418 - NTS_DM Other Other 0 240 1 1 740 619 0 45 34 chrUextra 20408238 20408327 -8596329 - NTS_DM Other Other 0 240 151 1 740 227 129 31 31 chrUextra 20408692 20408756 -8595900 + (TAA)n Simple_repeat Simple_repeat 2 65 0 1 740 2951 104 11 51 chrUextra 20409205 20409679 -8594977 + Gypsy12_LTR LTR Gypsy 1859 2313 -23 1 740 566 247 142 21 chrUextra 20409691 20409881 -8594775 + TAHRE LINE telomeric 9807 10019 -444 1 740 5925 0 0 3 chrUextra 20409981 20410658 -8593998 + ROO_I LTR Pao 2711 3385 -4871 1 740 1945 302 4 4 chrUextra 20410760 20411435 -8593221 + ROVER-I_DM LTR Gypsy 925 1599 -4985 1 740 6049 1 1 0 chrUextra 20411535 20412212 -8592444 + DOC LINE Jockey 1258 1935 -2790 1 740 31 26 0 0 chrUextra 20412928 20412966 -8591690 + AT_rich Low_complexity Low_complexity 1 38 0 1 740 236 0 0 0 chrUextra 20413089 20413115 -8591541 - NTS_DM Other Other -214 26 1 1 740 1885 8 17 17 chrUextra 20413115 20413355 -8591301 - NTS_DM Other Other 0 240 1 1 740 1889 13 17 13 chrUextra 20413355 20413594 -8591062 - NTS_DM Other Other 0 240 1 1 740 1153 24 23 23 chrUextra 20413594 20413766 -8590890 - NTS_DM Other Other 0 240 69 1 740 6042 6 0 0 chrUextra 20413866 20414543 -8590113 + DMRT1B LINE R1 1325 2001 -3182 1 740 6101 4 0 3 chrUextra 20414643 20415320 -8589336 + SSU-rRNA_Dme rRNA rRNA 28 702 -1293 1 740 495 182 0 0 chrUextra 20415975 20416096 -8588560 + (CATAG)n Simple_repeat Simple_repeat 4 124 0 1 740 5939 1 0 0 chrUextra 20416197 20416874 -8587782 - LSU-rRNA_Dme rRNA rRNA -2964 936 260 1 740 183 80 0 0 chrUextra 20416982 20417007 -8587649 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 740 2924 9 0 0 chrUextra 20417007 20417345 -8587311 - STALKER4_I LTR Gypsy -1218 5312 4975 1 740 1586 129 16 13 chrUextra 20417344 20417651 -8587005 + DMSAT6 Satellite Satellite 57 364 -106 1 740 5783 7 0 0 chrUextra 20417751 20418428 -8586228 + Invader2_I LTR Gypsy 2737 3413 -1179 1 740 3093 169 27 9 chrUextra 20418542 20419205 -8585451 - SAR_DM Satellite Satellite -411 1061 387 1 740 411 214 9 18 chrUextra 20419305 20419419 -8585237 + XDMR_DM Unknown Unknown 248 360 0 1 740 2835 184 8 19 chrUextra 20419333 20419979 -8584677 - SAR_DM Satellite Satellite -353 1119 481 1 740 3012 164 24 14 chrUextra 20420089 20420755 -8583901 + SAR_DM Satellite Satellite 180 852 -620 1 740 3100 182 8 12 chrUextra 20420874 20421536 -8583120 - SAR_DM Satellite Satellite -558 914 256 1 740 6008 1 0 0 chrUextra 20421636 20422313 -8582343 + ROO_I LTR Pao 6619 7295 -961 1 740 395 86 0 33 chrUextra 20422413 20422473 -8582183 + STALKER4_I LTR Gypsy 2137 2194 -4336 1 740 291 28 0 0 chrUextra 20422482 20422518 -8582138 + STALKER4_I LTR Gypsy 2315 2350 -4180 1 740 1520 100 29 0 chrUextra 20422520 20422761 -8581895 + STALKER4_I LTR Gypsy 2617 2864 -3666 1 740 2049 68 3 35 chrUextra 20422760 20423049 -8581607 - Gypsy6A_LTR LTR Gypsy -70 350 71 1 740 1405 25 25 20 chrUextra 20423190 20423390 -8581266 + NTS_DM Other Other 40 240 0 1 740 1930 4 17 13 chrUextra 20423390 20423629 -8581027 + NTS_DM Other Other 1 240 0 1 740 1929 0 17 13 chrUextra 20423629 20423867 -8580789 + NTS_DM Other Other 1 239 -1 1 740 6005 10 0 0 chrUextra 20423968 20424644 -8580012 - DMRT1B LINE R1 -551 4632 3957 1 740 3128 183 6 9 chrUextra 20424744 20425421 -8579235 - SAR_DM Satellite Satellite -593 879 205 1 740 3036 175 18 12 chrUextra 20425521 20426198 -8578458 + SAR_DM Satellite Satellite 240 920 -552 1 740 5242 64 6 1 chrUextra 20426298 20426975 -8577681 - FB4_DM DNA Tc1 -1663 2426 1747 1 740 6083 5 0 0 chrUextra 20427085 20427752 -8576904 + SSU-rRNA_Dme rRNA rRNA 1 667 -1328 1 740 3102 168 15 15 chrUextra 20427855 20428521 -8576135 + SAR_DM Satellite Satellite 293 958 -514 1 740 5708 12 0 0 chrUextra 20428629 20429306 -8575350 + DM176_I LTR Gypsy 1275 1951 -4469 1 740 2965 179 8 18 chrUextra 20429406 20430071 -8574585 + SAR_DM Satellite Satellite 462 1119 -353 1 740 339 223 0 11 chrUextra 20429986 20430081 -8574575 - XDMR_DM Unknown Unknown 0 360 267 1 740 5939 4 0 0 chrUextra 20430183 20430860 -8573796 - STALKER4_I LTR Gypsy -447 6083 5407 1 740 2802 186 8 27 chrUextra 20430961 20431626 -8573030 + SAR_DM Satellite Satellite 452 1103 -369 1 740 230 111 0 62 chrUextra 20431585 20431633 -8573023 - XDMR Unknown Unknown 0 361 317 1 740 21 95 0 0 chrUextra 20431903 20431966 -8572690 + AT_rich Low_complexity Low_complexity 1 63 0 1 740 3538 0 0 57 chrUextra 20431978 20432414 -8572242 + LSU-rRNA_Dme rRNA rRNA 1 411 -3489 1 740 189 147 0 0 chrUextra 20432611 20432645 -8572011 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 1 740 47 0 0 0 chrUextra 20432984 20433031 -8571625 + AT_rich Low_complexity Low_complexity 1 47 0 1 740 862 22 7 69 chrUextra 20433047 20433191 -8571465 - Gypsy4_I LTR Gypsy -5911 377 243 1 740 1620 0 0 0 chrUextra 20433291 20433525 -8571131 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 740 3525 198 0 0 chrUextra 20434068 20434745 -8569911 - ROVER-I_DM LTR Gypsy -2726 3858 3182 1 740 1144 15 0 0 chrUextra 20434845 20434977 -8569679 + DMRT1B LINE R1 5052 5183 0 1 740 4486 23 0 4 chrUextra 20434993 20435522 -8569134 - R1_DM LINE R1 -2784 2572 2046 1 740 4537 35 35 0 chrUextra 20435622 20436190 -8568466 - PROTOP DNA P -3892 588 1 1 740 1251 193 43 4 chrUextra 20436399 20437067 -8567589 + SAR_DM Satellite Satellite 1 693 -511 1 740 6145 0 3 0 chrUextra 20437176 20437853 -8566803 - DIVER_I LTR Pao -894 4749 4071 1 740 2673 88 30 10 chrUextra 20437953 20438356 -8566300 - MDG1_I LTR Gypsy -6185 411 1 1 740 1912 99 0 4 chrUextra 20438356 20438630 -8566026 - MDG1_LTR LTR Gypsy -30 412 140 1 740 5556 0 1 37 chrUextra 20438730 20439407 -8565249 + LSU-rRNA_Dme rRNA rRNA 49 701 -3199 1 740 6011 16 0 1 chrUextra 20439507 20440184 -8564472 - MAX_I LTR Pao -3807 4107 3432 1 740 1165 7 7 20 chrUextra 20440284 20440432 -8564224 + NTS_DM Other Other 17 162 -78 1 740 514 119 36 0 chrUextra 20440542 20440626 -8564030 + NTS_DM Other Other 4 90 -150 1 740 28 48 0 0 chrUextra 20440898 20440940 -8563716 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 2343 129 137 54 chrUextra 20441061 20441600 -8563056 + HOBO DNA hAT 2433 3016 0 1 740 633 195 8 23 chrUextra 20441607 20441738 -8562918 - HETRP_DM Satellite Satellite -197 1675 1547 1 740 21 89 0 0 chrUextra 20442026 20442082 -8562574 + AT_rich Low_complexity Low_complexity 1 56 0 1 740 3756 0 2 2 chrUextra 20442101 20442515 -8562141 - SSU-rRNA_Dme rRNA rRNA 0 1995 1582 1 740 1292 19 0 18 chrUextra 20442615 20442779 -8561877 + (TAA)n Simple_repeat Simple_repeat 2 162 0 1 740 1437 152 93 13 chrUextra 20442781 20443081 -8561575 + MDG1_LTR LTR Gypsy 89 412 -30 1 740 765 252 14 10 chrUextra 20443082 20443290 -8561366 + BS2 LINE Jockey 2721 2929 -1792 1 740 5905 0 4 1 chrUextra 20443392 20444069 -8560587 - TABOR_I LTR Gypsy -5271 1065 387 1 740 5850 0 1 3 chrUextra 20444169 20444846 -8559810 - SSU-rRNA_Dme rRNA rRNA -57 1938 1263 1 740 264 188 0 0 chrUextra 20445277 20445341 -8559315 + Gypsy8_I LTR Gypsy 230 293 -4054 1 740 2082 29 18 0 chrUextra 20445341 20445613 -8559043 + PROTOP DNA P 296 572 -3908 1 740 5728 9 3 0 chrUextra 20446500 20447177 -8557479 + STALKER4_I LTR Gypsy 3798 4476 -2054 1 741 5914 0 0 1 chrUextra 20447277 20447954 -8556702 + LSU-rRNA_Dme rRNA rRNA 2644 3319 -581 1 741 5176 8 30 12 chrUextra 20448054 20448731 -8555925 + MDG1_I LTR Gypsy 534 1222 -5374 1 741 5819 1 0 4 chrUextra 20448831 20449508 -8555148 + SSU-rRNA_Dme rRNA rRNA 379 1052 -943 1 741 5799 0 1 4 chrUextra 20449608 20450285 -8554371 - SSU-rRNA_Dme rRNA rRNA -635 1360 686 1 741 237 149 0 0 chrUextra 20450385 20450432 -8554224 - ARS406_DM Unknown Unknown -306 47 1 1 741 2929 177 12 8 chrUextra 20450392 20451062 -8553594 + SAR_DM Satellite Satellite 246 918 -554 1 741 4548 104 3 4 chrUextra 20451162 20451839 -8552817 - Gypsy12_I LTR Gypsy -3022 2524 1849 1 741 2861 177 13 15 chrUextra 20451944 20452615 -8552041 - SAR_DM Satellite Satellite -396 1076 407 1 741 2890 153 36 17 chrUextra 20452729 20453392 -8551264 + SAR_DM Satellite Satellite 369 1044 -428 1 741 5420 34 0 0 chrUextra 20453493 20454170 -8550486 - R1_DM LINE R1 -2148 3208 2532 1 741 379 202 10 29 chrUextra 20454270 20454372 -8550284 + HETRP_DM Satellite Satellite 1570 1669 -203 1 741 668 179 7 14 chrUextra 20454510 20454652 -8550004 + HETRP_DM Satellite Satellite 1529 1669 -203 1 741 587 217 0 47 chrUextra 20454796 20454946 -8549710 + HETRP_DM Satellite Satellite 1518 1660 -212 1 741 279 179 0 0 chrUextra 20457210 20457277 -8547379 + (TTATG)n Simple_repeat Simple_repeat 2 68 0 1 741 2060 12 4 0 chrUextra 20457378 20457628 -8547028 + R2_DM LINE R2 3355 3605 -2 1 741 433 55 0 0 chrUextra 20457624 20457679 -8546977 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 741 2185 74 33 24 chrUextra 20457679 20458055 -8546601 + R1_DM LINE R1 1 417 -4939 1 741 2640 185 15 25 chrUextra 20458162 20458832 -8545824 - SAR_DM Satellite Satellite -361 1111 449 1 741 526 54 0 0 chrUextra 20458932 20459024 -8545632 + FW_DM LINE Jockey 4601 4692 0 1 741 4597 33 2 2 chrUextra 20459026 20459609 -8545047 - R1_DM LINE R1 -3966 1390 808 1 741 4707 2 0 0 chrUextra 20459709 20460257 -8544399 - QUASIMODO_LTR LTR Gypsy -110 548 1 1 741 5780 18 0 0 chrUextra 20460486 20461163 -8543493 - DIVER_I LTR Pao -385 5258 4582 1 741 5902 1 1 0 chrUextra 20461263 20461940 -8542716 + LSU-rRNA_Dme rRNA rRNA 2066 2743 -1157 1 741 323 229 9 54 chrUextra 20462051 20462162 -8542494 - XDMR_DM Unknown Unknown -249 111 6 1 741 3001 177 8 5 chrUextra 20462065 20462717 -8541939 + SAR_DM Satellite Satellite 224 877 -595 1 741 1817 4 17 17 chrUextra 20462817 20463057 -8541599 - NTS_DM Other Other 0 240 1 1 741 1831 0 17 17 chrUextra 20463057 20463297 -8541359 - NTS_DM Other Other 0 240 1 1 741 1428 5 30 15 chrUextra 20463297 20463494 -8541162 - NTS_DM Other Other 0 240 41 1 741 4644 0 56 0 chrUextra 20463594 20464152 -8540504 - QUASIMODO_LTR LTR Gypsy -68 590 2 1 741 422 88 15 0 chrUextra 20464152 20464220 -8540436 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 741 5277 0 25 6 chrUextra 20464371 20465047 -8539609 + MAX_I LTR Pao 720 1408 -6506 1 741 5608 22 0 0 chrUextra 20465147 20465823 -8538833 - FW_DM LINE Jockey -685 4007 3332 1 741 5880 1 0 0 chrUextra 20465923 20466599 -8538057 - FW_DM LINE Jockey -575 4117 3442 1 741 2839 168 14 11 chrUextra 20466701 20467356 -8537300 - SAR_DM Satellite Satellite -587 885 229 1 741 503 80 0 0 chrUextra 20467300 20467375 -8537281 + ARS406_DM Unknown Unknown 1 75 -278 1 741 2878 187 16 6 chrUextra 20467475 20468149 -8536507 - SAR_DM Satellite Satellite -558 914 234 1 741 44 0 0 0 chrUextra 20468649 20468693 -8535963 + AT_rich Low_complexity Low_complexity 1 44 0 1 741 2011 190 104 43 chrUextra 20469028 20469703 -8534953 + SAR_DM Satellite Satellite 514 1229 -243 1 741 5809 4 0 0 chrUextra 20469803 20470479 -8534177 - FW_DM LINE Jockey -1033 3659 2984 1 741 2961 173 9 9 chrUextra 20470580 20471245 -8533411 + SAR_DM Satellite Satellite 412 1076 -396 1 741 2681 189 18 26 chrUextra 20471355 20472031 -8532625 - SAR_DM Satellite Satellite -658 670 1 1 741 666 72 10 0 chrUextra 20472131 20472228 -8532428 - R1_DM LINE R1 -5258 98 1 1 741 4582 18 2 0 chrUextra 20472261 20472807 -8531849 - R1_DM LINE R1 0 5356 4810 1 741 2361 154 12 3 chrUextra 20472907 20473571 -8531085 - SAR_DM Satellite Satellite -676 669 1 1 741 34 24 0 0 chrUextra 20473834 20473875 -8530781 + AT_rich Low_complexity Low_complexity 1 41 0 1 741 5867 1 0 1 chrUextra 20474459 20475135 -8529521 + LSU-rRNA_Dme rRNA rRNA 1868 2542 -1358 1 741 5797 1 0 1 chrUextra 20475235 20475911 -8528745 - R1_DM LINE R1 -1649 3707 3033 1 741 5807 3 0 0 chrUextra 20476011 20476687 -8527969 - R1_DM LINE R1 -1615 3741 3066 1 741 5057 34 11 1 chrUextra 20476816 20477463 -8527193 + Gypsy6_I LTR Gypsy 318 970 -6042 1 741 5235 33 41 6 chrUextra 20477563 20478239 -8526417 + FW_DM LINE Jockey 1892 2591 -2101 1 741 5917 1 0 0 chrUextra 20478339 20479015 -8525641 + LSU-rRNA_Dme rRNA rRNA 2668 3343 -557 1 741 1681 72 11 40 chrUextra 20479118 20479391 -8525265 - HETA LINE telomeric -3923 2158 1894 1 741 1186 66 0 0 chrUextra 20479390 20479556 -8525100 - HETA LINE telomeric -4524 1557 1392 1 741 1622 76 4 0 chrUextra 20479553 20479790 -8524866 - HETA LINE telomeric -9 6072 5835 1 741 1240 0 13 0 chrUextra 20479891 20480042 -8524614 + IDEFIX_I LTR Gypsy 39 191 -5437 1 741 39 50 0 0 chrUextra 20480371 20480431 -8524225 + AT_rich Low_complexity Low_complexity 1 60 0 1 741 610 116 0 18 chrUextra 20480667 20480781 -8523875 - ARS406_DM Unknown Unknown -241 112 1 1 741 2608 182 14 15 chrUextra 20480686 20481343 -8523313 + SAR_DM Satellite Satellite 195 850 -622 1 741 525 32 0 0 chrUextra 20481451 20481514 -8523142 + (TTCTC)n Simple_repeat Simple_repeat 3 65 0 1 741 1873 78 78 3 chrUextra 20482224 20482506 -8522150 - MDG1_LTR LTR Gypsy -46 396 94 1 741 351 105 0 0 chrUextra 20482508 20482565 -8522091 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 741 402 56 0 0 chrUextra 20482580 20482634 -8522022 + DOC5_DM LINE Jockey 3926 3979 -703 1 741 1772 23 71 11 chrUextra 20482629 20482895 -8521761 + DOC5_DM LINE Jockey 4180 4461 -221 1 741 3208 156 9 9 chrUextra 20483010 20483671 -8520985 + SAR_DM Satellite Satellite 369 1029 -443 1 741 810 20 0 0 chrUextra 20483773 20483871 -8520785 - DM176_I LTR Gypsy -6322 98 1 1 741 2020 20 16 0 chrUextra 20483871 20484124 -8520532 - DM176_LTR LTR Gypsy 0 507 251 1 741 2139 14 0 79 chrUextra 20484125 20484430 -8520226 - DM176_LTR LTR Gypsy -224 283 3 1 741 4518 53 3 53 chrUextra 20484547 20485223 -8519433 - BATUMI_I LTR Pao -5058 2905 2264 1 741 5189 49 1 3 chrUextra 20485327 20485999 -8518657 + R1_DM LINE R1 1044 1714 -3642 1 741 5602 27 1 0 chrUextra 20486099 20486775 -8517881 + DIVER_I LTR Pao 2042 2718 -2925 1 741 2858 190 18 18 chrUextra 20486879 20487545 -8517111 - SAR_DM Satellite Satellite -593 666 1 1 741 3015 169 12 9 chrUextra 20487651 20488325 -8516331 - SAR_DM Satellite Satellite -455 1017 342 1 741 1744 72 12 0 chrUextra 20488427 20488678 -8515978 - R1_DM LINE R1 -5102 254 1 1 741 954 26 0 0 chrUextra 20488711 20488825 -8515831 - R1_DM LINE R1 0 5356 5243 1 741 2256 14 4 4 chrUextra 20488822 20489100 -8515556 - R1_DM LINE R1 -290 5066 4789 1 741 1616 52 0 0 chrUextra 20489666 20489877 -8514779 + PROTOP DNA P 74 284 -4196 1 741 34 24 0 0 chrUextra 20490138 20490179 -8514477 + AT_rich Low_complexity Low_complexity 1 41 0 1 741 1625 0 0 0 chrUextra 20490468 20490655 -8514001 + LSU-rRNA_Dme rRNA rRNA 1 187 -3713 1 741 5596 19 0 0 chrUextra 20490755 20491431 -8513225 + R2_DM LINE R2 320 995 -2612 1 741 5664 6 1 1 chrUextra 20491531 20492207 -8512449 - R1_DM LINE R1 -1325 4031 3356 1 741 5807 3 0 0 chrUextra 20492307 20492983 -8511673 - Invader3_I LTR Gypsy -1309 3579 2904 1 741 22 88 0 0 chrUextra 20493106 20493163 -8511493 + AT_rich Low_complexity Low_complexity 1 57 0 1 741 2812 182 9 8 chrUextra 20493859 20494517 -8510139 + SAR_DM Satellite Satellite 418 1076 -396 1 741 951 0 0 0 chrUextra 20494635 20494746 -8509910 - LSU-rRNA_Dme rRNA rRNA -3789 111 1 1 741 21 95 0 0 chrUextra 20494758 20494821 -8509835 + AT_rich Low_complexity Low_complexity 1 63 0 1 741 34 24 0 0 chrUextra 20495034 20495075 -8509581 + AT_rich Low_complexity Low_complexity 1 41 0 1 741 1467 42 0 0 chrUextra 20495771 20496083 -8508573 + (TTCTC)n Simple_repeat Simple_repeat 1 312 0 1 741 5431 3 13 0 chrUextra 20496187 20496863 -8507793 - DM176_I LTR Gypsy -387 6033 5349 1 741 946 82 9 19 chrUextra 20496963 20497639 -8507017 + RSP Satellite Satellite 1 669 0 1 741 5396 3 0 0 chrUextra 20497793 20498415 -8506241 + LSU-rRNA_Dme rRNA rRNA 1788 2409 -1491 1 741 4661 2 0 44 chrUextra 20498518 20499113 -8505543 - LSU-rRNA_Dme rRNA rRNA -3331 569 1 1 741 21 95 0 0 chrUextra 20499125 20499188 -8505468 + AT_rich Low_complexity Low_complexity 1 63 0 1 741 4385 20 0 0 chrUextra 20499291 20499830 -8504826 - IDEFIX_I LTR Gypsy -3187 2441 1903 1 741 1099 22 0 0 chrUextra 20499828 20499967 -8504689 - IDEFIX_I LTR Gypsy -5359 269 131 1 741 2760 185 6 13 chrUextra 20500067 20500743 -8503913 + SAR_DM Satellite Satellite 1 671 -417 1 741 459 73 0 0 chrUextra 20501451 20501519 -8503137 - IDEFIX_I LTR Gypsy -1793 3835 3768 1 741 1328 23 0 6 chrUextra 20501619 20501792 -8502864 - NTS_DM Other Other -68 172 1 1 741 1408 20 20 20 chrUextra 20501792 20501995 -8502661 - NTS_DM Other Other 0 240 38 1 741 789 28 9 27 chrUextra 20501995 20502106 -8502550 - NTS_DM Other Other -107 133 25 1 741 21 57 0 0 chrUextra 20502132 20502167 -8502489 + AT_rich Low_complexity Low_complexity 1 35 0 1 741 863 31 0 8 chrUextra 20502167 20502295 -8502361 - NTS_DM Other Other -39 201 75 1 741 2832 179 15 9 chrUextra 20503171 20503847 -8500809 + SAR_DM Satellite Satellite 297 976 -496 1 741 5740 1 0 0 chrUextra 20503947 20504623 -8500033 - ROO_I LTR Pao -5094 3162 2487 1 741 4915 60 5 9 chrUextra 20504725 20505399 -8499257 - CIRCE LINE Composite -3702 2654 1984 1 741 289 104 0 0 chrUextra 20505499 20505547 -8499109 - ARS406_DM Unknown Unknown -305 48 1 1 741 2899 174 12 9 chrUextra 20505507 20506175 -8498481 + SAR_DM Satellite Satellite 246 915 -557 1 741 5842 0 0 0 chrUextra 20506275 20506951 -8497705 + R1_DM LINE R1 2343 3018 -2338 1 741 4799 27 0 0 chrUextra 20507054 20507649 -8497007 + FW_DM LINE Jockey 4095 4689 -3 1 741 673 37 0 0 chrUextra 20507645 20507727 -8496929 - ROO_I LTR Pao -4051 4205 4124 1 741 2525 23 3 0 chrUextra 20507827 20508134 -8496522 + R1_DM LINE R1 5049 5356 0 1 741 2346 69 6 9 chrUextra 20508167 20508503 -8496153 + R1_DM LINE R1 1 335 -5021 1 741 1221 175 7 0 chrUextra 20508603 20508877 -8495779 - ROVER-I_DM LTR Gypsy -319 6265 5990 1 741 1646 156 44 41 chrUextra 20508912 20509279 -8495377 - ROVER-I_DM LTR Gypsy -1276 5308 4941 1 741 1526 6 0 0 chrUextra 20509379 20509555 -8495101 - Gypsy2_LTR LTR Gypsy -177 176 1 1 741 2277 61 3 23 chrUextra 20509557 20510055 -8494601 - Gypsy2_I LTR Gypsy -1 6176 5679 1 741 5780 0 0 1 chrUextra 20510155 20510831 -8493825 + ROO_I LTR Pao 1882 2556 -5700 1 741 21 89 0 0 chrUextra 20511369 20511425 -8493231 + AT_rich Low_complexity Low_complexity 1 56 0 1 741 1391 0 0 6 chrUextra 20511444 20511607 -8493049 - SSU-rRNA_Dme rRNA rRNA 0 1995 1834 1 741 2909 145 103 4 chrUextra 20511707 20512383 -8492273 + TART_B1 LINE telomeric 882 1624 -9030 1 741 2880 182 9 16 chrUextra 20512484 20513159 -8491497 - SAR_DM Satellite Satellite -369 1103 434 1 741 679 0 0 12 chrUextra 20513259 20513342 -8491314 - LSU-rRNA_Dme rRNA rRNA -1908 1992 1911 1 741 2879 3 0 0 chrUextra 20513342 20513672 -8490984 - TRANSPAC_LTR LTR Gypsy 0 330 1 1 741 2106 8 0 0 chrUextra 20513671 20513935 -8490721 - TRANSPAC_I LTR Gypsy 0 4590 4327 1 741 5233 21 28 0 chrUextra 20514035 20514711 -8489945 - Gypsy4_I LTR Gypsy -915 5373 4679 1 741 5672 10 3 1 chrUextra 20514811 20515487 -8489169 + DOC2_DM LINE Jockey 2004 2680 -2113 1 741 3387 56 79 0 chrUextra 20515587 20516263 -8488393 - PROTOP_A DNA P -9 1096 502 1 741 207 0 0 0 chrUextra 20516420 20516443 -8488213 + (T)n Simple_repeat Simple_repeat 1 23 0 1 741 259 278 10 0 chrUextra 20516468 20516565 -8488091 + MAX_I LTR Pao 1066 1163 -6751 1 741 798 154 89 164 chrUextra 20516566 20517016 -8487640 + MAX_I LTR Pao 939 1354 -6560 1 741 548 13 26 0 chrUextra 20517139 20517216 -8487440 + NTS_DM Other Other 55 133 -107 1 741 797 10 0 0 chrUextra 20517216 20517312 -8487344 + NTS_DM Other Other 38 133 -107 1 741 1408 20 20 20 chrUextra 20517312 20517515 -8487141 + NTS_DM Other Other 38 240 0 1 741 1734 21 17 17 chrUextra 20517515 20517755 -8486901 + NTS_DM Other Other 1 240 0 1 741 452 17 33 0 chrUextra 20517755 20517815 -8486841 + NTS_DM Other Other 1 62 -178 1 741 364 41 0 0 chrUextra 20517915 20517964 -8486692 - ARS406_DM Unknown Unknown -215 138 90 1 741 1698 189 13 10 chrUextra 20517969 20518379 -8486277 + SAR_DM Satellite Satellite 1 551 -642 1 741 1010 94 0 0 chrUextra 20518379 20518538 -8486118 - ARS406_DM Unknown Unknown -194 159 1 1 741 1698 189 13 10 chrUextra 20518538 20518591 -8486065 + SAR_DM Satellite Satellite 552 624 -569 1 741 2937 165 14 9 chrUextra 20518691 20519351 -8485305 - SAR_DM Satellite Satellite -484 988 326 1 741 997 183 27 9 chrUextra 20519470 20520143 -8484513 - SAR_DM Satellite Satellite -730 684 1 1 741 21 89 0 0 chrUextra 20520280 20520336 -8484320 + AT_rich Low_complexity Low_complexity 1 56 0 1 741 4901 0 2 2 chrUextra 20520355 20520919 -8483737 - SSU-rRNA_Dme rRNA rRNA 0 1995 1432 1 741 2008 61 19 244 chrUextra 20521019 20521695 -8482961 + BATUMI_I LTR Pao 481 1004 -6959 1 741 5739 1 0 3 chrUextra 20521795 20522471 -8482185 - ROO_I LTR Pao -6533 1723 1050 1 741 2914 169 12 12 chrUextra 20522571 20523246 -8481410 + SAR_DM Satellite Satellite 284 958 -514 1 741 5725 4 1 0 chrUextra 20523347 20524023 -8480633 + DMRT1B LINE R1 4355 5031 -152 1 741 5468 18 1 3 chrUextra 20524123 20524797 -8479859 + R1_DM LINE R1 3411 4083 -1273 1 741 5548 25 0 0 chrUextra 20524899 20525575 -8479081 - R1_DM LINE R1 -2711 2645 1970 1 741 1858 210 98 40 chrUextra 20525675 20526351 -8478305 - Gypsy12_LTR LTR Gypsy -324 2012 1298 1 741 2652 185 22 24 chrUextra 20526451 20527125 -8477531 + SAR_DM Satellite Satellite 434 1106 -366 1 741 2835 0 0 0 chrUextra 20527228 20527549 -8477107 - LSU-rRNA_Dme rRNA rRNA -1792 2108 1788 1 741 2546 0 7 7 chrUextra 20527593 20527903 -8476753 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1479 1 741 512 77 0 37 chrUextra 20528011 20528119 -8476537 + (ACATG)n Simple_repeat Simple_repeat 3 106 0 1 741 5064 2 3 70 chrUextra 20528779 20529455 -8475201 - LSU-rRNA_Dme rRNA rRNA -1672 2228 1598 1 741 5668 10 0 0 chrUextra 20529556 20530231 -8474425 - STALKER4_I LTR Gypsy -659 5871 5197 1 741 2716 134 27 105 chrUextra 20530331 20531006 -8473650 + Gypsy12A_LTR LTR Gypsy 1636 2257 -23 1 741 5523 25 0 0 chrUextra 20531107 20531782 -8472874 + R1_DM LINE R1 2196 2870 -2486 1 741 5782 4 1 0 chrUextra 20531883 20532559 -8472097 + R1_DM LINE R1 4542 5218 -138 1 741 1326 80 0 5 chrUextra 20532663 20532851 -8471805 + Gypsy12_I LTR Gypsy 790 976 -4570 1 741 407 273 0 0 chrUextra 20532858 20532980 -8471676 + DM297_I LTR Gypsy 3337 3458 -2709 1 741 1386 195 44 29 chrUextra 20532980 20533323 -8471333 + Gypsy12_LTR LTR Gypsy 1 348 -1988 1 741 2839 3 0 0 chrUextra 20533541 20533867 -8470789 + SSU-rRNA_Dme rRNA rRNA 1 326 -1669 1 741 2121 0 0 0 chrUextra 20533863 20534110 -8470546 + LSU-rRNA_Dme rRNA rRNA 661 907 -2993 1 741 2543 204 9 6 chrUextra 20534211 20534861 -8469795 - SAR_DM Satellite Satellite -597 875 224 1 741 407 133 0 0 chrUextra 20534799 20534874 -8469782 + ARS406_DM Unknown Unknown 1 75 -278 1 741 5757 6 0 0 chrUextra 20534990 20535663 -8468993 - R1_DM LINE R1 -337 5019 4347 1 741 1497 6 0 0 chrUextra 20535763 20535936 -8468720 - LSU-rRNA_Dme rRNA rRNA -1088 2812 2640 1 741 2728 9 0 0 chrUextra 20535934 20536252 -8468404 - R1_DM LINE R1 0 5356 5039 1 741 1609 5 0 0 chrUextra 20536254 20536439 -8468217 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2465 1 741 2542 20 3 0 chrUextra 20536539 20536845 -8467811 - DM176_I LTR Gypsy -6113 307 1 1 741 3131 8 0 0 chrUextra 20536845 20537215 -8467441 - DM176_LTR LTR Gypsy 0 507 138 1 741 2381 84 28 18 chrUextra 20537315 20537991 -8466665 - DMSAT6 Satellite Satellite -71 682 1 1 741 803 0 0 0 chrUextra 20538091 20538185 -8466471 - NTS_DM Other Other -109 131 38 1 741 847 18 0 27 chrUextra 20538185 20538297 -8466359 - NTS_DM Other Other -107 133 25 1 741 1252 18 0 6 chrUextra 20538349 20538514 -8466142 - NTS_DM Other Other -39 201 38 1 741 870 9 0 27 chrUextra 20538514 20538626 -8466030 - NTS_DM Other Other -107 133 25 1 741 562 34 0 11 chrUextra 20538678 20538767 -8465889 - NTS_DM Other Other -39 201 114 1 741 2703 178 13 25 chrUextra 20538870 20539543 -8465113 - SAR_DM Satellite Satellite -361 1111 447 1 741 5394 12 4 0 chrUextra 20539643 20540319 -8464337 + IDEFIX_I LTR Gypsy 4433 5111 -517 1 741 2351 112 31 23 chrUextra 20541195 20541841 -8462815 + DMSAT6 Satellite Satellite 1 651 -236 1 741 2755 185 7 19 chrUextra 20541971 20542645 -8462011 + SAR_DM Satellite Satellite 446 1111 -361 1 741 22 94 0 0 chrUextra 20542755 20542819 -8461837 + AT_rich Low_complexity Low_complexity 1 64 0 1 741 4694 0 0 42 chrUextra 20542831 20543423 -8461233 + LSU-rRNA_Dme rRNA rRNA 1 567 -3333 1 741 1734 21 17 17 chrUextra 20543552 20543792 -8460864 + NTS_DM Other Other 1 240 0 1 741 1737 13 17 21 chrUextra 20543792 20544033 -8460623 + NTS_DM Other Other 1 240 0 1 741 1221 30 0 12 chrUextra 20544033 20544199 -8460457 + NTS_DM Other Other 1 164 -76 1 741 4950 33 55 12 chrUextra 20544299 20544975 -8459681 + DOC3_DM LINE Jockey 3114 3818 -922 1 741 5908 0 1 0 chrUextra 20545075 20545751 -8458905 + LSU-rRNA_Dme rRNA rRNA 2677 3353 -547 1 741 1756 17 17 17 chrUextra 20545891 20546131 -8458525 + NTS_DM Other Other 1 240 0 1 741 1770 13 17 17 chrUextra 20546131 20546371 -8458285 + NTS_DM Other Other 1 240 0 1 741 1257 6 0 6 chrUextra 20546371 20546527 -8458129 + NTS_DM Other Other 1 155 -85 1 741 1965 194 31 12 chrUextra 20546627 20547303 -8457353 - SAR_DM Satellite Satellite -1087 688 1 1 741 483 311 8 2 chrUextra 20547793 20547980 -8456676 - Gypsy5_I LTR Gypsy -3597 2912 2671 1 741 267 274 31 31 chrUextra 20547978 20548076 -8456580 - TIRANT_I LTR Gypsy -3996 3696 3599 1 741 610 27 0 0 chrUextra 20548179 20548252 -8456404 - PROTOP_A DNA P -876 229 157 1 741 1568 93 77 240 chrUextra 20548247 20548855 -8455801 + MAX_I LTR Pao 976 1484 -6430 1 741 2528 174 19 33 chrUextra 20549731 20550397 -8454259 - SAR_DM Satellite Satellite -320 1152 496 1 741 5365 30 25 3 chrUextra 20550507 20551183 -8453473 + R1_DM LINE R1 1467 2157 -3199 1 741 713 0 0 0 chrUextra 20551283 20551364 -8453292 - NTS_DM Other Other -159 81 1 1 741 1811 13 17 13 chrUextra 20551364 20551603 -8453053 - NTS_DM Other Other 0 240 1 1 741 1716 25 17 17 chrUextra 20551603 20551843 -8452813 - NTS_DM Other Other 0 240 1 1 741 674 27 35 35 chrUextra 20551843 20551959 -8452697 - NTS_DM Other Other 0 240 125 1 741 2325 99 27 18 chrUextra 20552059 20552735 -8451921 - DMSAT6 Satellite Satellite -111 682 1 1 741 528 16 0 0 chrUextra 20552835 20552896 -8451760 - NTS_DM Other Other -179 61 1 1 741 1847 4 17 13 chrUextra 20552896 20553135 -8451521 - NTS_DM Other Other 0 240 1 1 741 1861 0 17 13 chrUextra 20553135 20553374 -8451282 - NTS_DM Other Other 0 240 1 1 741 934 0 29 22 chrUextra 20553374 20553511 -8451145 - NTS_DM Other Other 0 240 103 1 741 4479 33 2 40 chrUextra 20553611 20554237 -8450419 - PROTOP_A DNA P -503 602 1 1 741 1620 9 0 5 chrUextra 20554390 20554822 -8449834 + (TTCTC)n Simple_repeat Simple_repeat 1 429 0 1 741 195 69 0 0 chrUextra 20554822 20554851 -8449805 + (CAGAG)n Simple_repeat Simple_repeat 4 32 0 1 741 1059 91 0 0 chrUextra 20554851 20555063 -8449593 + (GAGAA)n Simple_repeat Simple_repeat 1 212 0 1 741 5730 3 1 4 chrUextra 20555163 20555839 -8448817 - LSU-rRNA_Dme rRNA rRNA -2495 1405 732 1 741 5833 0 3 1 chrUextra 20555939 20556615 -8448041 + SSU-rRNA_Dme rRNA rRNA 616 1292 -703 1 741 22 88 0 0 chrUextra 20556741 20556798 -8447858 + AT_rich Low_complexity Low_complexity 1 57 0 1 741 23 68 0 0 chrUextra 20556836 20556880 -8447776 + AT_rich Low_complexity Low_complexity 1 44 0 1 741 26 30 0 0 chrUextra 20556926 20556959 -8447697 + AT_rich Low_complexity Low_complexity 1 33 0 1 741 489 33 0 0 chrUextra 20557330 20557391 -8447265 - PROTOP DNA P -1 4479 4418 1 741 3712 2 0 2 chrUextra 20557734 20558163 -8446493 - ROO_LTR LTR Pao 0 428 1 1 741 22 35 0 0 chrUextra 20558491 20558520 -8446136 + AT_rich Low_complexity Low_complexity 1 29 0 1 741 37 39 0 0 chrUextra 20558602 20558653 -8446003 + AT_rich Low_complexity Low_complexity 1 51 0 1 741 5219 40 28 1 chrUextra 20559043 20559719 -8444937 + R1_DM LINE R1 1238 1931 -3425 1 741 5622 1 0 1 chrUextra 20559846 20560495 -8444161 + LSU-rRNA_Dme rRNA rRNA 1788 2435 -1465 1 741 2858 171 13 21 chrUextra 20560595 20561271 -8443385 - SAR_DM Satellite Satellite -594 878 208 1 741 23 33 0 0 chrUextra 20561380 20561410 -8443246 + AT_rich Low_complexity Low_complexity 1 30 0 1 741 4448 28 76 7 chrUextra 20561445 20562047 -8442609 - PROTOP DNA P 0 4480 3837 1 741 2654 189 18 6 chrUextra 20562148 20562799 -8441857 - SAR_DM Satellite Satellite -634 838 180 1 741 760 115 0 0 chrUextra 20562693 20562823 -8441833 + ARS406_DM Unknown Unknown 1 130 -223 1 741 2213 119 25 22 chrUextra 20562923 20563599 -8441057 + DMSAT6 Satellite Satellite 1 677 -245 1 741 2883 180 12 9 chrUextra 20563702 20564375 -8440281 + SAR_DM Satellite Satellite 293 967 -505 1 741 626 200 7 14 chrUextra 20564597 20564739 -8439917 + HETRP_DM Satellite Satellite 1529 1669 -203 1 741 632 193 7 14 chrUextra 20564879 20565021 -8439635 + HETRP_DM Satellite Satellite 1529 1669 -203 1 741 5683 9 0 0 chrUextra 20565251 20565927 -8438729 + STALKER4_I LTR Gypsy 5200 5875 -655 1 741 1756 17 17 17 chrUextra 20566041 20566281 -8438375 - NTS_DM Other Other 0 240 1 1 741 1734 21 17 17 chrUextra 20566281 20566521 -8438135 - NTS_DM Other Other 0 240 1 1 741 1180 22 22 22 chrUextra 20566521 20566703 -8437953 - NTS_DM Other Other 0 240 59 1 741 2477 23 0 7 chrUextra 20566803 20567110 -8437546 - G_DM LINE Jockey -1389 2957 2653 1 741 246 150 0 0 chrUextra 20567160 20567200 -8437456 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 741 1409 20 19 34 chrUextra 20567270 20567479 -8437177 + NTS_DM Other Other 25 230 -10 1 741 1015 14 26 20 chrUextra 20567579 20567730 -8436926 + NTS_DM Other Other 89 240 0 1 741 1817 13 17 13 chrUextra 20567730 20567969 -8436687 + NTS_DM Other Other 1 240 0 1 741 1821 13 17 13 chrUextra 20567969 20568208 -8436448 + NTS_DM Other Other 1 240 0 1 741 335 25 0 0 chrUextra 20568208 20568248 -8436408 + NTS_DM Other Other 1 40 -200 1 741 3472 252 25 20 chrUextra 20568355 20569796 -8434860 + SAR_DM Satellite Satellite 1 1447 -216 1 741 2008 290 4 4 chrUextra 20569907 20570583 -8434073 - ROVER-I_DM LTR Gypsy -4967 1617 942 1 741 5190 15 0 34 chrUextra 20570683 20571359 -8433297 + G_DM LINE Jockey 3480 4132 -214 1 741 5605 19 1 0 chrUextra 20571459 20572135 -8432521 - Gypsy4_I LTR Gypsy -1597 4691 4015 1 741 2864 174 8 9 chrUextra 20572236 20572885 -8431771 - SAR_DM Satellite Satellite -633 839 192 1 741 816 82 0 0 chrUextra 20572789 20572911 -8431745 + ARS406_DM Unknown Unknown 1 122 -231 1 741 931 25 0 8 chrUextra 20573011 20573133 -8431523 - DM297_I LTR Gypsy -6046 121 1 1 741 3360 5 7 7 chrUextra 20573133 20573546 -8431110 - DM297_LTR LTR Gypsy 0 414 2 1 741 509 0 135 0 chrUextra 20573546 20573687 -8430969 + (TA)n Simple_repeat Simple_repeat 1 160 0 1 741 5805 1 0 0 chrUextra 20573787 20574463 -8430193 - DOC LINE Jockey -3071 1654 979 1 741 5624 9 4 3 chrUextra 20574563 20575239 -8429417 - LSU-rRNA_Dme rRNA rRNA -2163 1737 1061 1 741 329 23 0 0 chrUextra 20575339 20575383 -8429273 + NTS_DM Other Other 158 201 -39 1 741 810 9 0 44 chrUextra 20575435 20575549 -8429107 + NTS_DM Other Other 25 133 -107 1 741 1252 18 0 6 chrUextra 20575549 20575714 -8428942 + NTS_DM Other Other 38 201 -39 1 741 21 57 0 0 chrUextra 20575714 20575749 -8428907 + AT_rich Low_complexity Low_complexity 1 35 0 1 741 832 9 9 27 chrUextra 20575775 20575886 -8428770 + NTS_DM Other Other 25 133 -107 1 741 930 16 0 23 chrUextra 20575886 20576015 -8428641 + NTS_DM Other Other 38 163 -77 1 741 5514 25 3 0 chrUextra 20576115 20576791 -8427865 - R1_DM LINE R1 -835 4521 3844 1 741 1892 150 84 16 chrUextra 20576891 20577559 -8427097 + TART LINE telomeric 9116 9642 -4835 1 92 5732 3 1 1 chrUextra 20577667 20578343 -8426313 - R1_DM LINE R1 -1489 3867 3192 1 742 1352 0 6 0 chrUextra 20578444 20578609 -8426047 - NTS_DM Other Other -74 166 1 1 742 1825 8 17 13 chrUextra 20578609 20578848 -8425808 - NTS_DM Other Other 0 240 1 1 742 1769 21 17 13 chrUextra 20578848 20579087 -8425569 - NTS_DM Other Other 0 240 1 1 742 5779 6 0 0 chrUextra 20579995 20580671 -8423985 + R1_DM LINE R1 2047 2722 -2634 1 742 1655 30 17 17 chrUextra 20580771 20581007 -8423649 - NTS_DM Other Other -4 236 1 1 742 1709 25 17 17 chrUextra 20581007 20581247 -8423409 - NTS_DM Other Other 0 240 1 1 742 1375 20 20 20 chrUextra 20581248 20581447 -8423209 - NTS_DM Other Other -1 239 41 1 742 5409 4 0 4 chrUextra 20581547 20582223 -8422433 + STALKER4_I LTR Gypsy 5696 6368 -162 1 742 1143 187 0 0 chrUextra 20582403 20582601 -8422055 - Gypsy_I LTR Gypsy -5201 1306 1109 1 742 3226 30 0 0 chrUextra 20582595 20582999 -8421657 + DMCR1A LINE CR1 3914 4317 -153 1 742 28 48 0 0 chrUextra 20583236 20583278 -8421378 + AT_rich Low_complexity Low_complexity 1 42 0 1 742 32 0 0 0 chrUextra 20583606 20583638 -8421018 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 5425 21 0 0 chrUextra 20583876 20584551 -8420105 + STALKER4_I LTR Gypsy 2622 3296 -3234 1 742 2110 156 33 11 chrUextra 20584651 20585104 -8419552 + SAR_DM Satellite Satellite 382 844 -628 1 742 239 75 75 0 chrUextra 20585075 20585115 -8419541 - ARS406_DM Unknown Unknown -164 189 147 1 742 833 206 5 0 chrUextra 20585128 20585327 -8419329 + SAR_DM Satellite Satellite 550 749 -723 1 742 332 101 114 0 chrUextra 20585430 20585509 -8419147 - Stalker2_I LTR Gypsy -7073 329 242 1 742 276 73 0 0 chrUextra 20585707 20585748 -8418908 - Stalker2_I LTR Gypsy -7361 41 1 1 742 2577 18 66 3 chrUextra 20585748 20585896 -8418760 - Stalker3_LTR LTR Gypsy 0 372 225 1 742 207 0 0 0 chrUextra 20585896 20585919 -8418737 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 1 742 2577 18 66 3 chrUextra 20585919 20586103 -8418553 - Stalker3_LTR LTR Gypsy -148 224 20 1 742 589 0 0 14 chrUextra 20586203 20586276 -8418380 - LSU-rRNA_Dme rRNA rRNA -3828 72 1 1 742 21 95 0 0 chrUextra 20586288 20586351 -8418305 + AT_rich Low_complexity Low_complexity 1 63 0 1 742 34 24 0 0 chrUextra 20586564 20586605 -8418051 + AT_rich Low_complexity Low_complexity 1 41 0 1 742 2571 202 14 23 chrUextra 20586979 20587652 -8417004 + SAR_DM Satellite Satellite 1 667 -227 1 742 1649 12 238 0 chrUextra 20587755 20587982 -8416674 - R1_DM LINE R1 -4864 492 212 1 742 3932 2 0 0 chrUextra 20587980 20588431 -8416225 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2201 1 742 4091 2 0 0 chrUextra 20588531 20588996 -8415660 - SSU-rRNA_Dme rRNA rRNA -1530 465 1 1 742 32 0 0 0 chrUextra 20589128 20589160 -8415496 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 5260 21 1 0 chrUextra 20589307 20589983 -8414673 + STALKER4_I LTR Gypsy 5714 6390 -140 1 742 5655 9 1 1 chrUextra 20590083 20590758 -8413898 + R1_DM LINE R1 3780 4454 -902 1 742 2535 187 11 23 chrUextra 20591633 20592295 -8412361 + SAR_DM Satellite Satellite 466 1119 -353 1 742 4124 4 0 0 chrUextra 20592408 20592885 -8411771 - LSU-rRNA_Dme rRNA rRNA -784 3116 2640 1 742 1758 0 0 0 chrUextra 20592883 20593083 -8411573 - R1_DM LINE R1 0 5356 5157 1 742 5291 6 16 16 chrUextra 20593183 20593858 -8410798 + MDG1_I LTR Gypsy 466 1140 -5456 1 742 1490 267 17 15 chrUextra 20593979 20594633 -8410023 - QUASIMODO_I LTR Gypsy -641 5419 4765 1 742 5677 7 0 0 chrUextra 20595511 20596183 -8408473 + Invader2_I LTR Gypsy 480 1151 -3441 1 742 5703 3 1 1 chrUextra 20596283 20596958 -8407698 + R1_DM LINE R1 1006 1680 -3676 1 742 3837 67 186 2 chrUextra 20597058 20597733 -8406923 + Gypsy6_I LTR Gypsy 1832 3008 -4004 1 742 4688 24 38 0 chrUextra 20597833 20598414 -8406242 + DMCR1A LINE CR1 1239 1841 -2629 1 742 246 0 0 0 chrUextra 20598415 20598444 -8406212 + DMCR1A LINE CR1 2217 2245 -2225 1 742 456 46 0 0 chrUextra 20598443 20598508 -8406148 + DMCR1A LINE CR1 1396 1460 -3010 1 742 2561 188 12 23 chrUextra 20598608 20599273 -8405383 + SAR_DM Satellite Satellite 461 1118 -354 1 742 291 185 0 0 chrUextra 20599218 20599283 -8405373 - XDMR Unknown Unknown 0 361 297 1 742 1116 0 0 0 chrUextra 20599383 20599513 -8405143 - FW_DM LINE Jockey -4544 148 19 1 742 4625 104 5 0 chrUextra 20600160 20600833 -8403823 + Gypsy12_I LTR Gypsy 3895 4570 -976 1 742 5657 0 0 0 chrUextra 20600933 20601608 -8403048 + DM176_I LTR Gypsy 4391 5065 -1355 1 742 335 223 10 21 chrUextra 20602484 20602580 -8402076 + HETRP_DM Satellite Satellite 1570 1664 -208 1 742 681 179 7 14 chrUextra 20602747 20602889 -8401767 + HETRP_DM Satellite Satellite 1529 1669 -203 1 742 390 21 0 0 chrUextra 20603019 20603066 -8401590 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 742 339 258 0 0 chrUextra 20603066 20603155 -8401501 + HETRP_DM Satellite Satellite 1549 1637 -235 1 742 5776 1 3 3 chrUextra 20603258 20603933 -8400723 - SSU-rRNA_Dme rRNA rRNA -9 1986 1312 1 742 2488 81 11 30 chrUextra 20604033 20604692 -8399964 - DMSAT6 Satellite Satellite -399 646 1 1 742 1502 10 0 7 chrUextra 20604808 20605116 -8399540 + (TAGA)n Simple_repeat Simple_repeat 1 305 0 1 742 696 129 0 0 chrUextra 20605124 20605271 -8399385 + (ATCG)n Simple_repeat Simple_repeat 3 149 0 1 742 1104 91 0 0 chrUextra 20605271 20605483 -8399173 + (TAGA)n Simple_repeat Simple_repeat 1 212 0 1 742 2575 180 19 30 chrUextra 20605583 20606254 -8398402 + SAR_DM Satellite Satellite 496 1159 -313 1 742 5573 15 22 0 chrUextra 20606358 20607033 -8397623 - FW_DM LINE Jockey -2067 2625 1936 1 742 2903 164 19 11 chrUextra 20607160 20607807 -8396849 - SAR_DM Satellite Satellite -396 1076 425 1 742 5627 22 0 0 chrUextra 20608683 20609358 -8395298 - R1_DM LINE R1 -1561 3795 3121 1 742 2443 92 9 36 chrUextra 20609458 20610133 -8394523 + DMSAT6 Satellite Satellite 1 656 -64 1 742 342 0 0 0 chrUextra 20610870 20610908 -8393748 + (TCTTG)n Simple_repeat Simple_repeat 1 38 0 1 742 2242 106 9 38 chrUextra 20611008 20611645 -8393011 + DMSAT6 Satellite Satellite 1 618 -6 1 742 2891 180 9 10 chrUextra 20611783 20612458 -8392198 - SAR_DM Satellite Satellite -515 957 284 1 742 1621 73 9 0 chrUextra 20612558 20612790 -8391866 - R1_DM LINE R1 -5122 234 1 1 742 3312 29 0 5 chrUextra 20612823 20613233 -8391423 - R1_DM LINE R1 0 5356 4949 1 742 1955 178 5 7 chrUextra 20613333 20613762 -8390894 - SAR_DM Satellite Satellite -549 923 496 1 742 963 132 54 33 chrUextra 20613776 20614008 -8390648 - SAR_DM Satellite Satellite -928 544 332 1 742 5455 22 7 0 chrUextra 20614108 20614783 -8389873 - FW_DM LINE Jockey -1225 3467 2788 1 742 5508 18 22 0 chrUextra 20614883 20615558 -8389098 + ACCORD2_I LTR Gypsy 213 902 -6310 1 742 1015 0 0 8 chrUextra 20615658 20615778 -8388878 - ROO_I LTR Pao -8137 119 1 1 742 3766 0 0 0 chrUextra 20615778 20616206 -8388450 - ROO_LTR LTR Pao 0 428 1 1 742 847 40 198 8 chrUextra 20616207 20616333 -8388323 + QUASIMODO_I LTR Gypsy 4563 4712 -1348 1 742 245 133 0 0 chrUextra 20616433 20616478 -8388178 - ARS406_DM Unknown Unknown -308 45 1 1 742 3045 170 6 8 chrUextra 20616438 20617096 -8387560 + SAR_DM Satellite Satellite 246 902 -570 1 742 747 50 0 0 chrUextra 20617007 20617108 -8387548 - ARS406_DM Unknown Unknown -164 189 89 1 742 1750 68 0 0 chrUextra 20617208 20617442 -8387214 + R1_DM LINE R1 1157 1390 -3966 1 742 3550 27 0 0 chrUextra 20617443 20617883 -8386773 - FW_DM LINE Jockey -4 4688 4249 1 742 2906 175 12 10 chrUextra 20617983 20618658 -8385998 - SAR_DM Satellite Satellite -496 976 301 1 742 5128 7 49 6 chrUextra 20618758 20619433 -8385223 + FB4_DM DNA Tc1 3280 3983 -106 1 742 21 89 0 0 chrUextra 20620411 20620467 -8384189 + AT_rich Low_complexity Low_complexity 1 56 0 1 742 22 88 0 0 chrUextra 20620507 20620564 -8384092 + AT_rich Low_complexity Low_complexity 1 57 0 1 742 26 30 0 0 chrUextra 20620604 20620637 -8384019 + AT_rich Low_complexity Low_complexity 1 33 0 1 742 5849 0 0 1 chrUextra 20621083 20621758 -8382898 + DOC LINE Jockey 3143 3816 -909 1 742 976 0 0 0 chrUextra 20621858 20621969 -8382687 + NOMAD_LTR LTR Gypsy 408 518 0 1 742 4900 0 5 0 chrUextra 20621969 20622533 -8382123 + NOMAD_I LTR Gypsy 1 567 -6005 1 742 2983 176 6 8 chrUextra 20622635 20623288 -8381368 + SAR_DM Satellite Satellite 425 1076 -396 1 742 5508 10 0 0 chrUextra 20623408 20624083 -8380573 - IDEFIX_I LTR Gypsy -599 5029 4355 1 742 1146 15 0 0 chrUextra 20624386 20624521 -8380135 + 5S_DM RNA RNA 1 135 0 1 742 835 0 0 0 chrUextra 20624762 20624858 -8379798 + 5S_DM RNA RNA 1 96 -39 1 742 2343 84 6 28 chrUextra 20626508 20627179 -8377477 + DMSAT6 Satellite Satellite 1 655 -74 1 742 2947 176 6 11 chrUextra 20627286 20627952 -8376704 - SAR_DM Satellite Satellite -615 857 195 1 742 5581 10 0 0 chrUextra 20628833 20629508 -8375148 - R1_DM LINE R1 -4393 963 289 1 742 2293 166 16 6 chrUextra 20630383 20630873 -8373783 + SAR_DM Satellite Satellite 409 903 -569 1 742 1026 89 0 0 chrUextra 20630880 20631038 -8373618 - ARS406_DM Unknown Unknown -195 158 1 1 742 777 167 6 12 chrUextra 20630888 20631058 -8373598 + SAR_DM Satellite Satellite 496 664 -808 1 742 2866 169 11 14 chrUextra 20631158 20631817 -8372839 - SAR_DM Satellite Satellite -490 982 326 1 742 5891 0 1 1 chrUextra 20631933 20632608 -8372048 + LSU-rRNA_Dme rRNA rRNA 2945 3619 -281 1 742 3331 274 38 16 chrUextra 20632708 20634141 -8370515 + SAR_DM Satellite Satellite 1 1465 -208 1 742 2748 172 33 15 chrUextra 20634266 20634933 -8369723 - SAR_DM Satellite Satellite -417 1055 377 1 742 1444 69 0 0 chrUextra 20635033 20635236 -8369420 + MDG1_I LTR Gypsy 932 1134 -5462 1 742 1890 57 90 2 chrUextra 20635308 20635706 -8368950 + MDG1_I LTR Gypsy 1135 1567 -5029 1 742 5768 7 0 0 chrUextra 20635808 20636483 -8368173 + Gypsy4_I LTR Gypsy 1062 1736 -4552 1 742 2404 57 3 0 chrUextra 20636583 20636918 -8367738 - XDMR Unknown Unknown -25 336 1 1 742 2427 62 3 0 chrUextra 20636918 20637258 -8367398 - XDMR Unknown Unknown 0 361 21 1 742 5609 8 0 1 chrUextra 20637358 20638021 -8366635 + DMRT1B LINE R1 1929 2590 -2593 1 742 3038 176 9 7 chrUextra 20638133 20638808 -8365848 - SAR_DM Satellite Satellite -542 930 255 1 742 4255 82 113 12 chrUextra 20638908 20639563 -8365093 - Gypsy12_I LTR Gypsy -361 5185 4465 1 742 4571 49 2 2 chrUextra 20640458 20641055 -8363601 + R1_DM LINE R1 797 1393 -3963 1 742 474 26 0 0 chrUextra 20641055 20641133 -8363523 - FW_DM LINE Jockey 0 4692 4615 1 742 239 154 0 0 chrUextra 20641233 20641272 -8363384 - LSU-rRNA_Dme rRNA rRNA -1281 2619 2581 1 742 22 56 0 0 chrUextra 20641277 20641313 -8363343 + AT_rich Low_complexity Low_complexity 1 36 0 1 742 4532 0 2 2 chrUextra 20641386 20641908 -8362748 - LSU-rRNA_Dme rRNA rRNA 0 3900 3379 1 742 1663 10 0 0 chrUextra 20642008 20642210 -8362446 + DOC2_DM LINE Jockey 4592 4793 0 1 742 1892 193 11 7 chrUextra 20642218 20642683 -8361973 - SAR_DM Satellite Satellite -722 750 284 1 742 4861 33 2 0 chrUextra 20642785 20643416 -8361240 - DOC2_DM LINE Jockey -3909 884 253 1 742 4945 52 3 10 chrUextra 20643558 20644233 -8360423 - BATUMI_I LTR Pao -4043 3920 3251 1 742 1734 5 0 5 chrUextra 20644333 20644549 -8360107 - R2_DM LINE R2 -2957 650 436 1 742 3996 0 0 0 chrUextra 20644550 20645008 -8359648 - LSU-rRNA_Dme rRNA rRNA -723 3177 2720 1 742 1431 39 6 0 chrUextra 20645108 20645288 -8359368 - Baggins1 LINE LOA -3174 2279 2099 1 742 380 211 46 0 chrUextra 20645465 20645574 -8359082 - DNAREP1_DM LINE Penelope -299 295 182 1 742 292 291 0 0 chrUextra 20645603 20645689 -8358967 + DMRT1C LINE R1 4175 4260 -1183 1 742 2676 189 17 16 chrUextra 20645883 20646558 -8358098 + SAR_DM Satellite Satellite 1 675 -401 1 742 2802 52 27 34 chrUextra 20646661 20647333 -8357323 + DM176_I LTR Gypsy 110 726 -5694 1 742 353 0 0 0 chrUextra 20647433 20647475 -8357181 - PROTOP_B DNA P -1111 42 1 1 742 4177 30 30 16 chrUextra 20647475 20648108 -8356548 + PROTOP DNA P 3894 4430 -50 1 742 3065 169 15 7 chrUextra 20648208 20648883 -8355773 - SAR_DM Satellite Satellite -554 918 239 1 742 5582 8 8 0 chrUextra 20648992 20649658 -8354998 + FW_DM LINE Jockey 486 1156 -3536 1 742 432 0 0 0 chrUextra 20649758 20649806 -8354850 + (GAGAA)n Simple_repeat Simple_repeat 4 51 0 1 742 5384 24 27 0 chrUextra 20650533 20651208 -8353448 + FW_DM LINE Jockey 2849 3541 -1151 1 742 358 41 20 0 chrUextra 20651308 20651357 -8353299 + ARS406_DM Unknown Unknown 140 189 -164 1 742 2859 180 11 9 chrUextra 20651314 20651976 -8352680 - SAR_DM Satellite Satellite -615 857 195 1 742 5893 0 0 1 chrUextra 20654408 20655083 -8349573 - LSU-rRNA_Dme rRNA rRNA -742 3158 2485 1 742 5375 22 0 3 chrUextra 20655184 20655858 -8348798 - NINJA_I LTR Pao -82 5929 5258 1 742 4319 26 0 0 chrUextra 20655958 20656486 -8348170 - FW_DM LINE Jockey -925 3767 3240 1 742 1204 14 0 0 chrUextra 20656486 20656633 -8348023 + STALKER4_LTR LTR Gypsy 1 147 -255 1 742 2492 175 46 25 chrUextra 20656733 20657407 -8347249 + SAR_DM Satellite Satellite 472 1159 -313 1 742 2138 101 8 70 chrUextra 20657514 20658183 -8346473 - DMSAT6 Satellite Satellite -151 626 1 1 742 2036 179 12 7 chrUextra 20658288 20658953 -8345703 + SAR_DM Satellite Satellite 1 667 -677 1 742 40 67 0 0 chrUextra 20659615 20659690 -8344966 + AT_rich Low_complexity Low_complexity 1 75 0 1 742 1080 167 19 11 chrUextra 20659841 20660102 -8344554 + SAR_DM Satellite Satellite 527 789 -683 1 742 1109 164 18 5 chrUextra 20660113 20660506 -8344150 + SAR_DM Satellite Satellite 1 397 -680 1 742 27 49 0 0 chrUextra 20660889 20660930 -8343726 + AT_rich Low_complexity Low_complexity 1 41 0 1 742 21 95 0 0 chrUextra 20661143 20661206 -8343450 + AT_rich Low_complexity Low_complexity 1 63 0 1 742 565 0 0 0 chrUextra 20661218 20661283 -8343373 + LSU-rRNA_Dme rRNA rRNA 1 65 -3835 1 742 1167 19 6 0 chrUextra 20661383 20661544 -8343112 + FW_DM LINE Jockey 4530 4691 -1 1 742 424 310 17 12 chrUextra 20661807 20662054 -8342602 - GTWIN_I LTR Gypsy -2883 3538 3319 1 742 5799 3 0 0 chrUextra 20662158 20662833 -8341823 - MDG3_I LTR Gypsy -1563 3423 2749 1 742 5523 27 0 0 chrUextra 20662933 20663608 -8341048 - R1_DM LINE R1 -2396 2960 2286 1 742 942 62 8 0 chrUextra 20663708 20663838 -8340818 - R1_DM LINE R1 -5225 131 1 1 742 4149 27 8 0 chrUextra 20663871 20664383 -8340273 - R1_DM LINE R1 0 5356 4841 1 742 3021 183 9 4 chrUextra 20664483 20665158 -8339498 - SAR_DM Satellite Satellite -539 933 256 1 742 5568 1 0 0 chrUextra 20665258 20665933 -8338723 - ACCORD_I LTR Gypsy -652 5636 4962 1 742 954 20 26 26 chrUextra 20666033 20666185 -8338471 + NTS_DM Other Other 89 240 0 1 742 1744 21 17 17 chrUextra 20666185 20666425 -8338231 + NTS_DM Other Other 1 240 0 1 742 1756 17 17 17 chrUextra 20666425 20666665 -8337991 + NTS_DM Other Other 1 240 0 1 742 358 23 0 0 chrUextra 20666665 20666708 -8337948 + NTS_DM Other Other 1 43 -197 1 742 2410 10 20 0 chrUextra 20667584 20667890 -8336766 + QUASIMODO_I LTR Gypsy 5749 6060 0 1 742 3148 3 3 5 chrUextra 20667890 20668258 -8336398 + QUASIMODO_LTR LTR Gypsy 1 367 -291 1 742 6111 4 0 0 chrUextra 20668358 20669033 -8335623 - LSU-rRNA_Dme rRNA rRNA -1395 2505 1831 1 742 21 89 0 0 chrUextra 20669287 20669343 -8335313 + AT_rich Low_complexity Low_complexity 1 56 0 1 742 4091 0 2 0 chrUextra 20669362 20669808 -8334848 - SSU-rRNA_Dme rRNA rRNA 0 1995 1549 1 742 1441 164 33 10 chrUextra 20669908 20670209 -8334447 - SAR_DM Satellite Satellite -622 850 543 1 742 1469 173 32 9 chrUextra 20670220 20670558 -8334098 - SAR_DM Satellite Satellite -396 1076 731 1 742 4255 53 57 27 chrUextra 20670683 20671356 -8333300 - STALKER4_I LTR Gypsy -4956 1574 882 1 742 5767 7 1 3 chrUextra 20671458 20672133 -8332523 + STALKER4_I LTR Gypsy 1269 1942 -4588 1 742 3000 172 13 25 chrUextra 20672233 20672907 -8331749 + SAR_DM Satellite Satellite 438 1103 -369 1 742 3516 29 0 2 chrUextra 20673008 20673430 -8331226 + NINJA_I LTR Pao 5591 6011 0 1 742 1827 33 0 52 chrUextra 20673430 20673682 -8330974 + NINJA_LTR LTR Pao 1 239 -78 1 742 2925 188 13 21 chrUextra 20673784 20674458 -8330198 - SAR_DM Satellite Satellite -308 1164 496 1 742 4441 0 2 2 chrUextra 20674558 20675047 -8329609 + SSU-rRNA_Dme rRNA rRNA 1507 1995 0 1 742 21 89 0 0 chrUextra 20675066 20675122 -8329534 + AT_rich Low_complexity Low_complexity 1 56 0 1 742 1646 11 0 0 chrUextra 20675333 20675515 -8329141 - LSU-rRNA_Dme rRNA rRNA -1141 2759 2578 1 742 4567 0 0 0 chrUextra 20675511 20676008 -8328648 - R2_DM LINE R2 -5 3602 3106 1 742 5853 22 0 0 chrUextra 20676108 20676781 -8327875 + R1_DM LINE R1 1540 2212 -3144 1 742 3002 181 12 12 chrUextra 20676883 20677558 -8327098 + SAR_DM Satellite Satellite 304 978 -494 1 742 2939 179 19 12 chrUextra 20677661 20678333 -8326323 - SAR_DM Satellite Satellite -396 1076 400 1 742 2574 202 8 17 chrUextra 20678433 20679107 -8325549 - SAR_DM Satellite Satellite -676 668 1 1 742 1620 4 0 0 chrUextra 20679983 20680658 -8323998 + (TAGA)n Simple_repeat Simple_repeat 1 675 0 1 742 3047 173 6 21 chrUextra 20680767 20681433 -8323223 + SAR_DM Satellite Satellite 195 850 -622 1 742 4861 2 0 2 chrUextra 20681533 20682071 -8322585 + LSU-rRNA_Dme rRNA rRNA 2045 2581 -1319 1 742 1298 14 0 0 chrUextra 20682063 20682208 -8322448 + R2_DM LINE R2 873 1017 -2590 1 742 263 253 0 26 chrUextra 20682538 20682615 -8322041 + BS2 LINE Jockey 4149 4223 -498 1 742 781 21 0 20 chrUextra 20683083 20683182 -8321474 + BATUMI_I LTR Pao 7191 7287 -676 1 742 277 231 58 77 chrUextra 20683359 20683514 -8321142 + Gypsy3_I LTR Gypsy 1 152 -6025 1 742 223 161 33 74 chrUextra 20683524 20683645 -8321011 + (TTATA)n Simple_repeat Simple_repeat 2 117 0 1 742 280 162 14 29 chrUextra 20683645 20683715 -8320941 + Gypsy3_I LTR Gypsy 173 241 -5936 1 742 5627 30 0 0 chrUextra 20683858 20684533 -8320123 + MDG1_I LTR Gypsy 4376 5050 -1546 1 742 4922 40 2 0 chrUextra 20684691 20685308 -8319348 + IDEFIX_I LTR Gypsy 1 618 -5010 1 742 3218 158 33 14 chrUextra 20685413 20686079 -8318577 + SAR_DM Satellite Satellite 369 1047 -425 1 742 5585 15 56 0 chrUextra 20686183 20686858 -8317798 + STALKER4_I LTR Gypsy 1885 2597 -3933 1 742 5473 56 1 1 chrUextra 20686958 20687633 -8317023 + R1_DM LINE R1 1067 1741 -3615 1 742 2584 205 8 18 chrUextra 20688508 20689183 -8315473 - SAR_DM Satellite Satellite -676 667 1 1 742 434 185 9 18 chrUextra 20689283 20689393 -8315263 + XDMR_DM Unknown Unknown 252 360 0 1 742 2734 187 9 23 chrUextra 20689307 20689954 -8314702 - SAR_DM Satellite Satellite -354 1118 481 1 742 1713 13 17 22 chrUextra 20690059 20690289 -8314367 - NTS_DM Other Other -11 229 1 1 742 1835 17 17 17 chrUextra 20690289 20690529 -8314127 - NTS_DM Other Other 0 240 1 1 742 1463 20 25 20 chrUextra 20690529 20690733 -8313923 - NTS_DM Other Other 0 240 36 1 742 657 0 0 0 chrUextra 20690833 20690906 -8313750 + (TCTTG)n Simple_repeat Simple_repeat 3 75 0 1 742 429 69 0 0 chrUextra 20692383 20692441 -8312215 - NTS_DM Other Other -179 61 4 1 742 1325 6 0 24 chrUextra 20692551 20692717 -8311939 - NTS_DM Other Other -78 162 1 1 742 1926 4 17 13 chrUextra 20692717 20692956 -8311700 - NTS_DM Other Other 0 240 1 1 742 712 0 39 29 chrUextra 20692956 20693058 -8311598 - NTS_DM Other Other 0 240 138 1 742 5813 31 0 0 chrUextra 20693158 20693833 -8310823 + DIVER_I LTR Pao 580 1254 -4389 1 742 3187 172 9 8 chrUextra 20693933 20694595 -8310061 - SAR_DM Satellite Satellite -484 988 326 1 742 380 0 0 22 chrUextra 20694708 20694754 -8309902 + POGO DNA Pogo 659 703 -1418 1 742 452 0 0 0 chrUextra 20694752 20694802 -8309854 - Copia_I LTR Copia -4543 50 1 1 742 2340 4 4 0 chrUextra 20694802 20695077 -8309579 - Copia_LTR LTR Copia 0 276 1 1 742 524 115 31 0 chrUextra 20695154 20695250 -8309406 - PROTOP DNA P -861 3619 3521 1 742 272 0 0 0 chrUextra 20695483 20695513 -8309143 - MDG1_I LTR Gypsy -6566 30 1 1 742 3064 20 0 0 chrUextra 20695513 20695869 -8308787 - MDG1_LTR LTR Gypsy 0 442 87 1 742 423 100 0 0 chrUextra 20695869 20695939 -8308717 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 742 1320 28 3 23 chrUextra 20695943 20696158 -8308498 - MDG1_I LTR Gypsy -98 6799 6399 1 742 518 17 0 0 chrUextra 20696258 20696316 -8308340 - NTS_DM Other Other -182 58 1 1 742 1472 20 20 20 chrUextra 20696316 20696519 -8308137 - NTS_DM Other Other 0 240 38 1 742 840 9 9 36 chrUextra 20696519 20696631 -8308025 - NTS_DM Other Other -107 133 25 1 742 21 57 0 0 chrUextra 20696657 20696692 -8307964 + AT_rich Low_complexity Low_complexity 1 35 0 1 742 1304 18 0 6 chrUextra 20696692 20696857 -8307799 - NTS_DM Other Other -39 201 38 1 742 587 13 13 0 chrUextra 20696857 20696933 -8307723 - NTS_DM Other Other -107 133 57 1 742 1125 93 0 0 chrUextra 20697034 20697704 -8306952 + (CAAGA)n Simple_repeat Simple_repeat 1 670 0 1 742 3168 167 16 15 chrUextra 20697808 20698483 -8306173 + SAR_DM Satellite Satellite 208 883 -589 1 742 5964 0 3 6 chrUextra 20698583 20699258 -8305398 + SSU-rRNA_Dme rRNA rRNA 855 1527 -468 1 742 5570 24 62 0 chrUextra 20699358 20700033 -8304623 + R1_DM LINE R1 2782 3498 -1858 1 742 1716 18 13 22 chrUextra 20700133 20700358 -8304298 - NTS_DM Other Other -17 223 1 1 742 1472 20 20 20 chrUextra 20700358 20700561 -8304095 - NTS_DM Other Other 0 240 38 1 742 851 0 0 0 chrUextra 20700561 20700657 -8303999 - NTS_DM Other Other -107 133 38 1 742 833 9 18 27 chrUextra 20700657 20700767 -8303889 - NTS_DM Other Other -107 133 25 1 742 3121 182 5 6 chrUextra 20700909 20701565 -8303091 + SAR_DM Satellite Satellite 422 1076 -396 1 742 1722 183 15 5 chrUextra 20701687 20702358 -8302298 + SAR_DM Satellite Satellite 1 678 -569 1 742 5448 27 0 1 chrUextra 20702459 20703133 -8301523 + IDEFIX_I LTR Gypsy 4086 4758 -870 1 742 6163 1 0 0 chrUextra 20703237 20703908 -8300748 - SSU-rRNA_Dme rRNA rRNA -1099 896 226 1 742 2881 182 19 22 chrUextra 20704008 20704683 -8299973 - SAR_DM Satellite Satellite -319 1153 481 1 742 1815 66 0 4 chrUextra 20704783 20705027 -8299629 + R1_DM LINE R1 369 611 -4745 1 742 1749 56 0 0 chrUextra 20705029 20705242 -8299414 + R1_DM LINE R1 1247 1459 -3897 1 742 1702 34 0 5 chrUextra 20705253 20705458 -8299198 + R1_DM LINE R1 1556 1759 -3597 1 742 198 0 0 0 chrUextra 20706085 20706107 -8298549 + (T)n Simple_repeat Simple_repeat 1 22 0 1 742 5297 10 6 3 chrUextra 20706335 20707008 -8297648 - Stalker2_I LTR Gypsy -5810 1592 918 1 742 3138 173 12 9 chrUextra 20707108 20707783 -8296873 - SAR_DM Satellite Satellite -396 1076 400 1 742 2935 176 17 9 chrUextra 20707883 20708520 -8296136 - SAR_DM Satellite Satellite -636 836 195 1 742 816 92 8 15 chrUextra 20708426 20708558 -8296098 + ARS406_DM Unknown Unknown 1 131 -222 1 742 3238 167 9 13 chrUextra 20708661 20709333 -8295323 + SAR_DM Satellite Satellite 361 1029 -443 1 743 3374 157 11 11 chrUextra 20709437 20710106 -8294550 + SAR_DM Satellite Satellite 369 1037 -435 1 743 3131 18 95 0 chrUextra 20710208 20710755 -8293901 + R1_DM LINE R1 4093 4691 -665 1 743 1039 73 0 7 chrUextra 20710745 20710883 -8293773 + R1_DM LINE R1 5034 5170 -186 1 743 4158 8 0 2 chrUextra 20710983 20711468 -8293188 + DOC LINE Jockey 4242 4725 0 1 743 5762 22 0 0 chrUextra 20711759 20712433 -8292223 - Invader3_I LTR Gypsy -2380 2508 1835 1 743 5797 27 0 0 chrUextra 20712533 20713208 -8291448 - MDG1_I LTR Gypsy -2139 4457 3783 1 743 5281 37 27 1 chrUextra 20713308 20713983 -8290673 - R1_DM LINE R1 -4187 1169 478 1 743 5145 31 0 3 chrUextra 20714151 20714758 -8289898 + BATUMI_I LTR Pao 4315 4919 -3044 1 743 4712 76 2 5 chrUextra 20714862 20715533 -8289123 + BATUMI_I LTR Pao 4315 5080 -2834 1 743 382 302 35 11 chrUextra 20715639 20715813 -8288843 - XDMR Unknown Unknown -183 178 1 1 743 1153 288 69 31 chrUextra 20715665 20716306 -8288350 + SAR_DM Satellite Satellite 566 1230 -242 1 743 3349 164 9 9 chrUextra 20716408 20717083 -8287573 + SAR_DM Satellite Satellite 393 1067 -405 1 743 1053 19 25 25 chrUextra 20717183 20717341 -8287315 + NTS_DM Other Other 83 240 0 1 743 1813 21 17 17 chrUextra 20717341 20717581 -8287075 + NTS_DM Other Other 1 240 0 1 743 1177 8 0 0 chrUextra 20717581 20717714 -8286942 + NTS_DM Other Other 1 133 -107 1 743 1066 22 7 7 chrUextra 20717714 20717854 -8286802 + NTS_DM Other Other 38 177 -63 1 743 34 24 0 0 chrUextra 20718107 20718148 -8286508 + AT_rich Low_complexity Low_complexity 1 41 0 1 743 1389 70 22 53 chrUextra 20718733 20718960 -8285696 - Gypsy12_I LTR Gypsy -5326 220 1 1 743 2564 111 14 49 chrUextra 20718960 20719387 -8285269 - Gypsy12_LTR LTR Gypsy 0 2336 1925 1 743 4555 30 2 0 chrUextra 20719508 20720045 -8284611 + R1_DM LINE R1 4296 4833 -523 1 743 1138 29 7 0 chrUextra 20720045 20720183 -8284473 - Stalker3_LTR LTR Gypsy 0 372 234 1 743 2961 170 12 7 chrUextra 20720283 20720956 -8283700 + SAR_DM Satellite Satellite 1 675 -1037 1 743 1818 147 80 3 chrUextra 20721071 20721732 -8282924 + SAR_DM Satellite Satellite 1 712 -679 1 743 834 10 0 0 chrUextra 20721833 20721929 -8282727 + NTS_DM Other Other 38 133 -107 1 743 1304 18 0 6 chrUextra 20721929 20722094 -8282562 + NTS_DM Other Other 38 201 -39 1 743 907 9 0 27 chrUextra 20722146 20722258 -8282398 + NTS_DM Other Other 25 133 -107 1 743 1304 18 0 6 chrUextra 20722258 20722423 -8282233 + NTS_DM Other Other 38 201 -39 1 743 21 57 0 0 chrUextra 20722423 20722458 -8282198 + AT_rich Low_complexity Low_complexity 1 35 0 1 743 1120 8 0 0 chrUextra 20722608 20722738 -8281918 - ACCORD_LTR LTR Gypsy -222 336 207 1 743 4737 4 0 0 chrUextra 20722737 20723283 -8281373 - DMRT1A LINE R1 -2 5181 4636 1 743 2412 175 12 5 chrUextra 20723403 20724042 -8280614 - SAR_DM Satellite Satellite -677 643 1 1 743 3380 20 78 6 chrUextra 20724158 20724833 -8279823 + FW_DM LINE Jockey 3469 4192 -500 1 743 897 173 102 15 chrUextra 20725133 20725338 -8279318 + DMLTR5 LTR Gypsy 44 266 0 1 743 351 49 65 16 chrUextra 20725337 20725399 -8279257 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 743 244 128 0 21 chrUextra 20725418 20725466 -8279190 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 743 5845 0 0 0 chrUextra 20725710 20726383 -8278273 + DMRT1A LINE R1 3797 4469 -714 1 743 2376 4 0 0 chrUextra 20727258 20727531 -8277125 - LSU-rRNA_Dme rRNA rRNA -988 2912 2640 1 743 2728 9 0 0 chrUextra 20727529 20727847 -8276809 - R1_DM LINE R1 0 5356 5039 1 743 741 0 0 0 chrUextra 20727849 20727933 -8276723 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2566 1 743 1339 112 5 18 chrUextra 20728033 20728252 -8276404 - Gypsy12_I LTR Gypsy -3096 2450 2235 1 743 2970 117 7 0 chrUextra 20728246 20728707 -8275949 - Gypsy12_I LTR Gypsy -3457 2089 1626 1 743 4683 3 133 1 chrUextra 20728807 20729481 -8275175 + NOMAD_I LTR Gypsy 675 1437 -5135 1 743 1514 15 30 0 chrUextra 20729581 20729778 -8274878 + R1_DM LINE R1 4864 5066 -290 1 743 924 44 0 0 chrUextra 20729775 20729889 -8274767 + R1_DM LINE R1 5243 5356 0 1 743 2369 58 15 9 chrUextra 20729922 20730255 -8274401 + R1_DM LINE R1 1 335 -5021 1 743 5402 31 0 0 chrUextra 20730355 20731029 -8273627 - MDG1_I LTR Gypsy -2496 4100 3427 1 743 2959 181 15 6 chrUextra 20731132 20731803 -8272853 - SAR_DM Satellite Satellite -549 923 247 1 743 2767 12 0 0 chrUextra 20731903 20732230 -8272426 - DM176_I LTR Gypsy -6093 327 1 1 743 2016 20 16 0 chrUextra 20732230 20732483 -8272173 - DM176_LTR LTR Gypsy 0 507 251 1 743 787 11 0 0 chrUextra 20732484 20732577 -8272079 - DM176_LTR LTR Gypsy -224 283 191 1 743 2991 159 24 15 chrUextra 20732678 20733341 -8271315 - SAR_DM Satellite Satellite -478 994 326 1 743 5245 40 1 1 chrUextra 20733451 20734125 -8270531 - R1_DM LINE R1 -3927 1429 756 1 743 2851 64 13 0 chrUextra 20734225 20734617 -8270039 - TART LINE telomeric -12036 2441 2045 1 743 1937 82 72 0 chrUextra 20734608 20734899 -8269757 - TART LINE telomeric -12618 1859 1548 1 743 22 56 0 0 chrUextra 20735053 20735089 -8269567 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 246 150 0 0 chrUextra 20735094 20735134 -8269522 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 743 246 150 0 0 chrUextra 20735186 20735226 -8269430 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 743 255 125 0 0 chrUextra 20735269 20735309 -8269347 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 743 22 56 0 0 chrUextra 20735322 20735358 -8269298 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 870 9 0 27 chrUextra 20735384 20735496 -8269160 + NTS_DM Other Other 25 133 -107 1 743 1233 19 0 6 chrUextra 20735498 20735661 -8268995 + NTS_DM Other Other 40 201 -39 1 743 5705 13 0 0 chrUextra 20736547 20737221 -8267435 - DOC2_DM LINE Jockey -976 3817 3144 1 743 22 0 0 0 chrUextra 20737373 20737395 -8267261 + AT_rich Low_complexity Low_complexity 1 22 0 1 743 236 231 0 13 chrUextra 20737489 20737568 -8267088 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 743 401 103 15 0 chrUextra 20737644 20737712 -8266944 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 743 2402 0 0 0 chrUextra 20737712 20737995 -8266661 + QUASIMODO_LTR LTR Gypsy 2 284 -374 1 743 3780 13 40 0 chrUextra 20738869 20739341 -8265315 - IDEFIX_LTR LTR Gypsy -103 491 1 1 743 1654 0 0 5 chrUextra 20739341 20739543 -8265113 - IDEFIX_I LTR Gypsy 0 5628 5428 1 743 45 0 0 0 chrUextra 20740064 20740109 -8264547 + AT_rich Low_complexity Low_complexity 1 45 0 1 743 180 0 0 0 chrUextra 20740297 20740317 -8264339 + (TAGA)n Simple_repeat Simple_repeat 1 20 0 1 743 23 54 0 0 chrUextra 20740434 20740471 -8264185 + AT_rich Low_complexity Low_complexity 1 37 0 1 743 832 9 9 27 chrUextra 20740497 20740608 -8264048 + NTS_DM Other Other 25 133 -107 1 743 817 0 0 0 chrUextra 20740608 20740704 -8263952 + NTS_DM Other Other 38 133 -107 1 743 1408 20 20 20 chrUextra 20740704 20740907 -8263749 + NTS_DM Other Other 38 240 0 1 743 1414 27 0 5 chrUextra 20740907 20741091 -8263565 + NTS_DM Other Other 1 183 -57 1 743 5333 25 7 0 chrUextra 20741191 20741865 -8262791 + Invader2_I LTR Gypsy 1970 2648 -1944 1 743 1176 0 0 0 chrUextra 20742073 20742208 -8262448 - 5S_DM RNA RNA 0 135 1 1 743 1147 7 0 0 chrUextra 20742432 20742567 -8262089 - 5S_DM RNA RNA 0 135 1 1 743 5471 25 0 1 chrUextra 20742739 20743413 -8261243 + R1_DM LINE R1 2296 2968 -2388 1 743 4217 72 6 3 chrUextra 20743520 20744187 -8260469 + G2_DM LINE Jockey 4 514 -2588 1 743 5780 3 0 1 chrUextra 20744287 20744957 -8259699 - G2_DM LINE Jockey -2176 926 258 1 743 4605 25 39 58 chrUextra 20745061 20745735 -8258921 + BATUMI_I LTR Pao 2255 2915 -5048 1 743 5232 7 0 3 chrUextra 20745835 20746449 -8258207 + LSU-rRNA_Dme rRNA rRNA 2033 2644 -1256 1 743 551 0 0 15 chrUextra 20746442 20746509 -8258147 + R1_DM LINE R1 4841 4906 -450 1 743 1688 42 4 40 chrUextra 20746746 20746996 -8257660 - BATUMI_LTR LTR Pao 0 272 32 1 743 1863 69 0 8 chrUextra 20747018 20747282 -8257374 - BATUMI_I LTR Pao 0 7963 7702 1 743 5284 15 46 6 chrUextra 20747383 20748057 -8256599 + MICROPIA_I LTR Gypsy 3737 4437 -39 1 743 5709 3 0 0 chrUextra 20748157 20748831 -8255825 - ROO_I LTR Pao -2727 5529 4856 1 743 5643 0 1 1 chrUextra 20748931 20749605 -8255051 + R1_DM LINE R1 589 1262 -4094 1 743 817 106 0 0 chrUextra 20749708 20749840 -8254816 - ARS406_DM Unknown Unknown -221 132 1 1 743 2808 182 9 8 chrUextra 20749747 20750379 -8254277 + SAR_DM Satellite Satellite 195 827 -645 1 743 28 48 0 0 chrUextra 20750498 20750540 -8254116 + AT_rich Low_complexity Low_complexity 1 42 0 1 743 32 0 0 0 chrUextra 20750873 20750905 -8253751 + AT_rich Low_complexity Low_complexity 1 32 0 1 743 938 9 0 17 chrUextra 20751037 20751153 -8253503 + SSU-rRNA_Dme rRNA rRNA 1 114 -1881 1 743 5898 1 0 0 chrUextra 20751253 20751927 -8252729 - SSU-rRNA_Dme rRNA rRNA -893 1102 429 1 743 4983 25 1 39 chrUextra 20752027 20752701 -8251955 + DOC2_DM LINE Jockey 301 949 -3844 1 743 4080 13 84 13 chrUextra 20752801 20753336 -8251320 - CIRCE LINE Composite -2269 4087 3515 1 743 420 172 7 0 chrUextra 20753333 20753473 -8251183 + Gypsy9_I LTR Gypsy 1895 1971 -2706 1 743 4760 26 82 0 chrUextra 20753575 20754249 -8250407 - R1_DM LINE R1 -166 5190 4462 1 743 5869 5 0 0 chrUextra 20754349 20755023 -8249633 - LSU-rRNA_Dme rRNA rRNA -429 3471 2798 1 743 5891 1 1 0 chrUextra 20755123 20755797 -8248859 + LSU-rRNA_Dme rRNA rRNA 3213 3887 -13 1 743 5829 0 0 0 chrUextra 20755897 20756571 -8248085 - DOC LINE Jockey -2341 2384 1711 1 743 37 39 0 0 chrUextra 20756694 20756745 -8247911 + AT_rich Low_complexity Low_complexity 1 51 0 1 743 29 47 0 0 chrUextra 20757100 20757143 -8247513 + AT_rich Low_complexity Low_complexity 1 43 0 1 743 5600 9 1 0 chrUextra 20757445 20758119 -8246537 - STALKER4_I LTR Gypsy -822 5708 5034 1 743 2853 259 33 16 chrUextra 20758221 20759627 -8245029 - SAR_DM Satellite Satellite -911 1430 1 1 743 5859 1 3 0 chrUextra 20759767 20760441 -8244215 - LSU-rRNA_Dme rRNA rRNA -394 3506 2831 1 743 4415 31 28 8 chrUextra 20760541 20761160 -8243496 + PROTOP DNA P 193 823 -3657 1 743 451 0 0 0 chrUextra 20761155 20761215 -8243441 + PROTOP DNA P 3802 3861 -619 1 743 5453 30 0 0 chrUextra 20761315 20761989 -8242667 - R1_DM LINE R1 -2076 3280 2607 1 743 2881 180 13 13 chrUextra 20762092 20762763 -8241893 + SAR_DM Satellite Satellite 332 1002 -470 1 743 2844 186 5 16 chrUextra 20762863 20763537 -8241119 - SAR_DM Satellite Satellite -361 1111 446 1 743 1151 121 33 43 chrUextra 20763637 20764006 -8240650 + QUASIMODO_LTR LTR Gypsy 182 621 -37 1 743 324 0 0 0 chrUextra 20764411 20764447 -8240209 + (CACAA)n Simple_repeat Simple_repeat 3 38 0 1 743 3053 166 12 9 chrUextra 20765186 20765859 -8238797 + SAR_DM Satellite Satellite 332 1006 -466 1 743 1901 93 133 3 chrUextra 20765959 20766281 -8238375 + MDG1_LTR LTR Gypsy 49 412 -30 1 743 2162 89 34 11 chrUextra 20766281 20766633 -8238023 + MDG1_I LTR Gypsy 1 360 -6236 1 743 323 291 39 8 chrUextra 20767130 20767258 -8237398 + Copia2_I LTR Copia 567 698 -3464 1 743 369 0 0 0 chrUextra 20767265 20767310 -8237346 + Copia2_LTR_DM LTR Copia 154 198 0 1 743 847 0 0 0 chrUextra 20767310 20767407 -8237249 + Copia2_I LTR Copia 1 97 -4065 1 743 2601 174 12 23 chrUextra 20767507 20768156 -8236500 + SAR_DM Satellite Satellite 477 1118 -354 1 743 353 177 39 59 chrUextra 20768079 20768181 -8236475 - XDMR_DM Unknown Unknown -9 351 252 1 743 1978 162 13 10 chrUextra 20769060 20769727 -8234929 + SAR_DM Satellite Satellite 1 668 -677 1 743 832 47 0 0 chrUextra 20769829 20769935 -8234721 - G2_DM LINE Jockey -1738 1364 1259 1 743 4296 48 5 3 chrUextra 20769932 20770503 -8234153 - G2_DM LINE Jockey -2228 874 303 1 743 5707 1 6 1 chrUextra 20770614 20771277 -8233379 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1967 1 743 3149 170 7 6 chrUextra 20771377 20772050 -8232606 - SAR_DM Satellite Satellite -430 1042 369 1 743 499 155 384 0 chrUextra 20773709 20773926 -8230730 - HMSBEAGLE_I LTR Gypsy -432 6097 5797 1 743 1934 111 25 0 chrUextra 20773937 20774252 -8230404 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 1 743 617 124 0 0 chrUextra 20774267 20774372 -8230284 - HMSBEAGLE_I LTR Gypsy -3358 3171 3067 1 743 5424 42 1 0 chrUextra 20774473 20775147 -8229509 - BS2 LINE Jockey -751 3970 3296 1 743 28 48 0 0 chrUextra 20775304 20775346 -8229310 + AT_rich Low_complexity Low_complexity 1 42 0 1 743 2869 12 0 0 chrUextra 20776021 20776363 -8228293 + TRANSIB2 DNA Transib 828 1169 -1675 1 743 2619 24 24 0 chrUextra 20776362 20776695 -8227961 + TRANSIB2 DNA Transib 2405 2745 -99 1 743 859 90 0 0 chrUextra 20776795 20776928 -8227728 - ARS406_DM Unknown Unknown -220 133 1 1 743 3779 267 20 24 chrUextra 20776835 20778221 -8226435 + SAR_DM Satellite Satellite 1 1380 -208 1 743 540 42 0 14 chrUextra 20778171 20778243 -8226413 - ARS406_DM Unknown Unknown -164 189 119 1 743 6186 3 0 0 chrUextra 20778343 20779017 -8225639 - R2_DM LINE R2 -1584 2023 1350 1 743 1021 0 0 16 chrUextra 20779119 20779244 -8225412 - QUASIMODO_LTR LTR Gypsy -535 123 1 1 743 4382 6 11 0 chrUextra 20779244 20779791 -8224865 - QUASIMODO_I LTR Gypsy 0 6060 5508 1 743 1937 27 0 0 chrUextra 20779891 20780116 -8224540 - PROTOP_A DNA P -880 225 1 1 743 5093 45 3 6 chrUextra 20780665 20781339 -8223317 + IDEFIX_I LTR Gypsy 3140 3811 -1817 1 743 1047 182 150 29 chrUextra 20781439 20781909 -8222747 + Gypsy12_LTR LTR Gypsy 1217 1727 -553 1 743 1194 61 27 48 chrUextra 20781923 20782111 -8222545 + Gypsy12_I LTR Gypsy 1 184 -5362 1 743 1360 21 26 21 chrUextra 20782213 20782407 -8222249 + NTS_DM Other Other 46 240 0 1 743 1835 17 17 17 chrUextra 20782407 20782647 -8222009 + NTS_DM Other Other 1 240 0 1 743 1716 26 25 17 chrUextra 20782647 20782885 -8221771 + NTS_DM Other Other 1 240 0 1 743 3301 149 25 21 chrUextra 20782988 20783661 -8220995 - SAR_DM Satellite Satellite -464 1008 333 1 743 4374 91 1 45 chrUextra 20783764 20784431 -8220225 - R1_DM LINE R1 -4145 1211 574 1 743 5431 8 5 12 chrUextra 20784535 20785205 -8219451 + STALKER4_I LTR Gypsy 5634 6298 -232 1 743 4902 2 0 0 chrUextra 20785311 20785845 -8218811 - SSU-rRNA_Dme rRNA rRNA -1461 534 1 1 743 3145 170 9 19 chrUextra 20786083 20786756 -8217900 + SAR_DM Satellite Satellite 438 1103 -369 1 743 6084 1 0 0 chrUextra 20786857 20787531 -8217125 - R1_DM LINE R1 -3119 2237 1564 1 743 3005 188 9 8 chrUextra 20787634 20788304 -8216352 + SAR_DM Satellite Satellite 192 862 -610 1 743 6036 1 1 0 chrUextra 20788414 20789079 -8215577 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1967 1 743 5880 5 0 0 chrUextra 20789179 20789853 -8214803 + Invader2_I LTR Gypsy 2580 3253 -1339 1 743 6128 0 5 0 chrUextra 20789953 20790627 -8214029 + LSU-rRNA_Dme rRNA rRNA 3071 3747 -153 1 743 34 24 0 0 chrUextra 20791121 20791162 -8213494 + AT_rich Low_complexity Low_complexity 1 41 0 1 743 5898 9 0 0 chrUextra 20791503 20792175 -8212481 - QUASIMODO_I LTR Gypsy -2681 3379 2708 1 743 3156 166 17 9 chrUextra 20792275 20792932 -8211724 - SAR_DM Satellite Satellite -485 987 326 1 743 3090 183 6 6 chrUextra 20793075 20793723 -8210933 - SAR_DM Satellite Satellite -396 1076 429 1 743 442 88 44 0 chrUextra 20793869 20793937 -8210719 - DNAREP1_DM LINE Penelope -2 592 522 1 743 429 149 0 0 chrUextra 20793934 20794001 -8210655 - Gypsy_LTR LTR Gypsy -415 67 1 1 743 3286 137 14 0 chrUextra 20794001 20794497 -8210159 - Gypsy_I LTR Gypsy 0 6507 6005 1 743 6060 0 1 0 chrUextra 20794597 20795271 -8209385 - FW_DM LINE Jockey -160 4532 3858 1 743 2073 4 0 0 chrUextra 20795371 20795605 -8209051 - DM176_LTR LTR Gypsy -273 234 1 1 743 1158 122 0 0 chrUextra 20795606 20796044 -8208612 + (TA)n Simple_repeat Simple_repeat 1 438 0 1 743 5929 3 0 1 chrUextra 20796145 20796819 -8207837 + ROO_I LTR Pao 3613 4285 -3971 1 743 3059 196 6 6 chrUextra 20796919 20797593 -8207063 - SAR_DM Satellite Satellite -544 928 255 1 743 5662 39 0 0 chrUextra 20797693 20798367 -8206289 - BATUMI_I LTR Pao -2801 5162 4489 1 743 21 89 0 0 chrUextra 20798996 20799052 -8205604 + AT_rich Low_complexity Low_complexity 1 56 0 1 743 627 0 0 0 chrUextra 20799071 20799141 -8205515 - SSU-rRNA_Dme rRNA rRNA 0 1995 1926 1 743 962 70 6 20 chrUextra 20799242 20799915 -8204741 - RSP Satellite Satellite -23 663 1 1 743 5829 21 0 1 chrUextra 20800015 20800689 -8203967 - FW_DM LINE Jockey -455 4237 3565 1 743 3162 180 10 8 chrUextra 20800792 20801463 -8203193 - SAR_DM Satellite Satellite -549 923 251 1 743 5297 2 0 0 chrUextra 20801563 20802192 -8202464 + Invader2_I LTR Gypsy 3964 4592 0 1 743 403 0 0 0 chrUextra 20802192 20802237 -8202419 + Invader2_LTR LTR Gypsy 1 45 -221 1 743 6137 1 0 0 chrUextra 20802337 20803011 -8201645 - FW_DM LINE Jockey -309 4383 3710 1 743 946 178 102 15 chrUextra 20803301 20803506 -8201150 + DMLTR5 LTR Gypsy 44 266 0 1 743 372 49 65 16 chrUextra 20803505 20803567 -8201089 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 743 259 128 0 21 chrUextra 20803589 20803637 -8201019 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 743 21 89 0 0 chrUextra 20804215 20804271 -8200385 + AT_rich Low_complexity Low_complexity 1 56 0 1 743 2450 0 4 0 chrUextra 20804290 20804559 -8200097 - SSU-rRNA_Dme rRNA rRNA 0 1995 1726 1 743 2215 29 11 0 chrUextra 20804661 20804933 -8199723 + Gypsy7_I LTR Gypsy 3633 3907 -1077 1 743 1401 157 14 28 chrUextra 20805051 20805333 -8199323 + PROTOP_B DNA P 867 1144 -9 1 743 5430 8 3 12 chrUextra 20805449 20806107 -8198549 + STALKER4_I LTR Gypsy 1064 1715 -4815 1 743 5266 0 2 2 chrUextra 20806207 20806786 -8197870 + LSU-rRNA_Dme rRNA rRNA 3322 3900 0 1 743 2222 164 17 11 chrUextra 20807756 20808423 -8196233 + SAR_DM Satellite Satellite 1 671 -569 1 743 34 24 0 0 chrUextra 20808688 20808729 -8195927 + AT_rich Low_complexity Low_complexity 1 41 0 1 743 21 95 0 0 chrUextra 20808942 20809005 -8195651 + AT_rich Low_complexity Low_complexity 1 63 0 1 743 1649 0 0 5 chrUextra 20809017 20809203 -8195453 + LSU-rRNA_Dme rRNA rRNA 1 185 -3715 1 743 3218 168 10 12 chrUextra 20809303 20809977 -8194679 + SAR_DM Satellite Satellite 334 1006 -466 1 743 3073 186 7 9 chrUextra 20810077 20810750 -8193906 + SAR_DM Satellite Satellite 287 958 -514 1 743 6013 1 1 0 chrUextra 20810851 20811525 -8193131 + ROO_I LTR Pao 5287 5961 -2295 1 743 5672 28 5 1 chrUextra 20811625 20812299 -8192357 - R1_DM LINE R1 -419 4937 4262 1 743 2216 276 11 11 chrUextra 20812399 20813050 -8191606 + Gypsy_I LTR Gypsy 2452 3102 -3405 1 743 5935 12 0 0 chrUextra 20813177 20813847 -8190809 - MDG3_I LTR Gypsy -3326 1660 991 1 743 346 340 16 14 chrUextra 20814054 20814298 -8190358 - Gypsy3_I LTR Gypsy -4829 1348 1179 1 743 2055 25 0 0 chrUextra 20814721 20814966 -8189690 - ROO_I LTR Pao -6709 1547 1303 1 743 2246 48 134 93 chrUextra 20814955 20815395 -8189261 - ROO_I LTR Pao -7362 894 437 1 743 28 48 0 0 chrUextra 20815618 20815660 -8188996 + AT_rich Low_complexity Low_complexity 1 42 0 1 743 514 119 36 0 chrUextra 20815934 20816018 -8188638 - NTS_DM Other Other -150 90 4 1 743 5961 12 0 0 chrUextra 20816269 20816943 -8187713 - STALKER4_I LTR Gypsy -1760 4770 4097 1 743 281 171 71 0 chrUextra 20817043 20817113 -8187543 - DMTOM1_LTR LTR Gypsy -52 358 284 1 743 266 176 58 14 chrUextra 20817130 20817199 -8187457 - DM176_LTR LTR Gypsy -141 366 295 1 743 850 126 0 59 chrUextra 20817423 20817575 -8187081 - DM176_I LTR Gypsy 0 6420 6278 1 743 777 127 0 7 chrUextra 20817574 20817717 -8186939 - DM297_I LTR Gypsy -486 5681 5540 1 743 3126 170 12 12 chrUextra 20817817 20818491 -8186165 + SAR_DM Satellite Satellite 332 1005 -467 1 743 2807 206 14 20 chrUextra 20818594 20819265 -8185391 + SAR_DM Satellite Satellite 1 666 -203 1 743 227 309 51 51 chrUextra 20819684 20819861 -8184795 + Gypsy6_I LTR Gypsy 4538 4714 -2298 1 743 5642 6 12 1 chrUextra 20820139 20820813 -8183843 + MDG1_I LTR Gypsy 939 1619 -4977 1 743 32 0 0 0 chrUextra 20821106 20821138 -8183518 + AT_rich Low_complexity Low_complexity 1 32 0 1 743 2854 3 3 0 chrUextra 20821270 20821587 -8183069 + SSU-rRNA_Dme rRNA rRNA 1 318 -1677 1 743 3084 184 14 6 chrUextra 20821691 20822358 -8182298 - SAR_DM Satellite Satellite -577 895 224 1 743 6033 0 1 5 chrUextra 20822461 20823135 -8181521 - SSU-rRNA_Dme rRNA rRNA -541 1454 783 1 743 760 26 0 25 chrUextra 20823235 20823355 -8181301 + NTS_DM Other Other 85 201 -39 1 743 859 18 0 35 chrUextra 20823407 20823520 -8181136 + NTS_DM Other Other 25 133 -107 1 743 998 18 0 68 chrUextra 20823520 20823696 -8180960 + NTS_DM Other Other 38 201 -39 1 743 21 57 0 0 chrUextra 20823696 20823731 -8180925 + AT_rich Low_complexity Low_complexity 1 35 0 1 743 722 19 9 69 chrUextra 20823759 20823875 -8180781 + NTS_DM Other Other 25 133 -107 1 743 2447 182 5 5 chrUextra 20824011 20824032 -8180624 - SAR_DM Satellite Satellite -807 672 646 1 743 1070 89 0 0 chrUextra 20824032 20824190 -8180466 + ARS406_DM Unknown Unknown 1 158 -195 1 743 2447 182 5 5 chrUextra 20824190 20824683 -8179973 - SAR_DM Satellite Satellite -807 645 1 1 743 5800 25 0 0 chrUextra 20824783 20825457 -8179199 + R1_DM LINE R1 3959 4632 -724 1 743 3273 183 151 1 chrUextra 20825557 20826231 -8178425 + ROVER-I_DM LTR Gypsy 4077 4851 -1733 1 743 1304 18 0 6 chrUextra 20826363 20826528 -8178128 - NTS_DM Other Other -39 201 38 1 743 907 9 0 27 chrUextra 20826528 20826640 -8178016 - NTS_DM Other Other -107 133 25 1 743 22 56 0 0 chrUextra 20826666 20826702 -8177954 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 269 125 0 0 chrUextra 20826715 20826755 -8177901 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 743 262 150 0 0 chrUextra 20826798 20826838 -8177818 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 743 262 150 0 0 chrUextra 20826890 20826930 -8177726 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 743 5613 27 13 1 chrUextra 20827105 20827779 -8176877 + G2_DM LINE Jockey 471 1152 -1950 1 743 3009 71 101 0 chrUextra 20827885 20828310 -8176346 - DMCR1A LINE CR1 -705 3765 3298 1 743 1852 85 12 0 chrUextra 20828305 20828553 -8176103 - DMCR1A LINE CR1 -1290 3180 2930 1 743 6142 0 0 1 chrUextra 20828653 20829327 -8175329 - LSU-rRNA_Dme rRNA rRNA -549 3351 2679 1 743 5888 3 0 0 chrUextra 20829427 20830074 -8174582 - LSU-rRNA_Dme rRNA rRNA -614 3286 2640 1 743 256 0 0 0 chrUextra 20830072 20830101 -8174555 - R1_DM LINE R1 0 5356 5328 1 743 4455 77 1 35 chrUextra 20830225 20830875 -8173781 - CIRCE LINE Composite -2367 3989 3362 1 743 1801 306 14 18 chrUextra 20830975 20831637 -8173019 + Invader1_I LTR Gypsy 1834 2492 -694 1 743 2861 65 8 18 chrUextra 20832031 20832423 -8172233 - Baggins1 LINE LOA -262 5191 4804 1 743 213 227 0 0 chrUextra 20832530 20832574 -8172082 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 743 230 0 35 0 chrUextra 20833299 20833328 -8171328 - BATUMI_I LTR Pao -6539 1424 1395 1 743 3064 125 17 44 chrUextra 20833349 20833934 -8170722 - BATUMI_I LTR Pao -6646 1317 749 1 743 5278 3 5 68 chrUextra 20834071 20834745 -8169911 - LSU-rRNA_Dme rRNA rRNA -1624 2276 1646 1 743 6047 0 3 3 chrUextra 20834846 20835519 -8169137 - SSU-rRNA_Dme rRNA rRNA -30 1965 1293 1 743 5681 18 31 1 chrUextra 20836393 20837067 -8167589 - FW_DM LINE Jockey -3393 1299 606 1 743 4129 45 40 8 chrUextra 20837167 20837841 -8166815 + PROTOP DNA P 149 753 -3727 1 743 1037 191 33 15 chrUextra 20837941 20838602 -8166054 + SAR_DM Satellite Satellite 1 672 -680 1 743 5560 28 0 0 chrUextra 20838715 20839389 -8165267 - STALKER4_I LTR Gypsy -2740 3790 3117 1 743 2143 84 3 6 chrUextra 20839850 20840163 -8164493 - CIRCE LINE Composite -1376 4980 4669 1 92 5610 21 3 18 chrUextra 20840263 20840937 -8163719 + BATUMI_I LTR Pao 1295 1958 -6005 1 744 5626 0 31 3 chrUextra 20841037 20841711 -8162945 + ROO_I LTR Pao 189 881 -7375 1 744 3230 157 25 16 chrUextra 20841813 20842485 -8162171 - SAR_DM Satellite Satellite -539 933 256 1 744 2119 0 0 0 chrUextra 20842585 20842820 -8161836 + R2_DM LINE R2 3373 3607 0 1 744 689 26 0 0 chrUextra 20842819 20842897 -8161759 + LSU-rRNA_Dme rRNA rRNA 2578 2655 -1245 1 744 927 10 0 0 chrUextra 20842897 20842999 -8161657 + R1_DM LINE R1 5255 5356 0 1 744 2383 4 0 0 chrUextra 20842997 20843259 -8161397 + LSU-rRNA_Dme rRNA rRNA 2640 2901 -999 1 744 6044 0 3 3 chrUextra 20843359 20844033 -8160623 + SSU-rRNA_Dme rRNA rRNA 829 1502 -493 1 744 3213 169 8 8 chrUextra 20844147 20844803 -8159853 - SAR_DM Satellite Satellite -418 1054 399 1 744 694 12 12 0 chrUextra 20844907 20844988 -8159668 + BATUMI_I LTR Pao 7203 7284 -679 1 744 2946 100 82 40 chrUextra 20844988 20845563 -8159093 + BATUMI_I LTR Pao 1 599 -7364 1 744 1006 201 4 8 chrUextra 20845681 20845917 -8158739 + SAR_DM Satellite Satellite 516 750 -722 1 744 3513 12 0 12 chrUextra 20845925 20846340 -8158316 - DOC2_DM LINE Jockey 0 4793 4384 1 744 21 89 0 0 chrUextra 20846824 20846880 -8157776 + AT_rich Low_complexity Low_complexity 1 56 0 1 744 2069 9 0 0 chrUextra 20846899 20847129 -8157527 - SSU-rRNA_Dme rRNA rRNA 0 1995 1766 1 744 5833 0 0 1 chrUextra 20847229 20847903 -8156753 + ROO_I LTR Pao 760 1432 -6824 1 744 6036 5 1 0 chrUextra 20848004 20848677 -8155979 - R1_DM LINE R1 -1549 3807 3134 1 744 1125 0 0 0 chrUextra 20848777 20848902 -8155754 + (CAAAA)n Simple_repeat Simple_repeat 2 126 0 1 744 2935 196 14 22 chrUextra 20849551 20850225 -8154431 + SAR_DM Satellite Satellite 1 668 -203 1 744 3034 166 16 24 chrUextra 20851103 20851771 -8152885 + SAR_DM Satellite Satellite 247 909 -563 1 744 6102 0 3 0 chrUextra 20851874 20852545 -8152111 - SSU-rRNA_Dme rRNA rRNA -15 1980 1308 1 744 1397 6 21 16 chrUextra 20852645 20852831 -8151825 + NTS_DM Other Other 54 240 0 1 744 1921 4 17 13 chrUextra 20852831 20853070 -8151586 + NTS_DM Other Other 1 240 0 1 744 1896 4 17 17 chrUextra 20853070 20853310 -8151346 + NTS_DM Other Other 1 240 0 1 744 475 27 13 13 chrUextra 20853418 20853493 -8151163 + NTS_DM Other Other 127 201 -39 1 744 907 9 0 27 chrUextra 20853545 20853657 -8150999 + NTS_DM Other Other 25 133 -107 1 744 1304 18 0 6 chrUextra 20853657 20853822 -8150834 + NTS_DM Other Other 38 201 -39 1 744 21 57 0 0 chrUextra 20853822 20853857 -8150799 + AT_rich Low_complexity Low_complexity 1 35 0 1 744 870 9 9 27 chrUextra 20853883 20853994 -8150662 + NTS_DM Other Other 25 133 -107 1 744 828 10 0 0 chrUextra 20853994 20854090 -8150566 + NTS_DM Other Other 38 133 -107 1 744 3043 172 13 24 chrUextra 20854191 20854864 -8149792 + SAR_DM Satellite Satellite 436 1101 -371 1 744 2473 249 11 8 chrUextra 20854975 20855636 -8149020 + TOM_I LTR Gypsy 4731 5393 -719 1 744 1296 43 108 5 chrUextra 20855737 20855922 -8148734 + G4_DM LINE Jockey 2750 2953 -903 1 744 455 70 0 0 chrUextra 20855904 20855961 -8148695 + G4_DM LINE Jockey 3117 3173 -683 1 744 3238 55 88 2 chrUextra 20855955 20856410 -8148246 + G4_DM LINE Jockey 3329 3822 -34 1 744 3234 63 19 9 chrUextra 20856510 20856943 -8147713 + R1_DM LINE R1 1808 2244 -3112 1 744 681 31 219 0 chrUextra 20857017 20857113 -8147543 - Gypsy6A_LTR LTR Gypsy -233 187 71 1 744 341 135 0 0 chrUextra 20857131 20857183 -8147473 + R1_DM LINE R1 1 52 -5304 1 744 414 39 0 0 chrUextra 20857283 20857335 -8147321 + (TTCTC)n Simple_repeat Simple_repeat 5 56 0 1 744 2075 118 24 72 chrUextra 20858060 20858479 -8146177 + TART LINE telomeric 2964 3362 -11115 1 744 1422 134 14 27 chrUextra 20858474 20858727 -8145929 + TART LINE telomeric 3683 3919 -10558 1 744 1513 25 0 104 chrUextra 20858829 20859050 -8145606 + DIVER2_I LTR Pao 1378 1575 -2572 1 744 3521 35 9 0 chrUextra 20859027 20859452 -8145204 + DIVER2_I LTR Pao 3719 4147 0 1 744 441 20 0 0 chrUextra 20859452 20859501 -8145155 + DIVER2_LTR LTR Pao 1 49 -336 1 744 3057 170 21 11 chrUextra 20859602 20860268 -8144388 - SAR_DM Satellite Satellite -554 918 246 1 744 836 107 0 0 chrUextra 20860375 20860506 -8144150 - ARS406_DM Unknown Unknown -222 131 1 1 744 3068 176 5 6 chrUextra 20860413 20861047 -8143609 + SAR_DM Satellite Satellite 195 827 -645 1 744 21 89 0 0 chrUextra 20861585 20861641 -8143015 + AT_rich Low_complexity Low_complexity 1 56 0 1 744 1477 0 0 0 chrUextra 20861660 20861821 -8142835 - SSU-rRNA_Dme rRNA rRNA 0 1995 1835 1 744 5669 15 10 0 chrUextra 20861921 20862594 -8142062 + Gypsy4_I LTR Gypsy 4313 4992 -1296 1 744 5508 24 45 3 chrUextra 20862694 20863367 -8141289 - R1_DM LINE R1 -1011 4345 3645 1 744 3015 177 10 22 chrUextra 20863467 20864138 -8140518 + SAR_DM Satellite Satellite 428 1090 -382 1 744 386 96 0 14 chrUextra 20864830 20864904 -8139752 + (CATGT)n Simple_repeat Simple_repeat 4 76 0 1 744 1213 0 0 0 chrUextra 20865016 20865149 -8139507 - FW_DM LINE Jockey -837 3855 3723 1 744 280 119 0 243 chrUextra 20865150 20865261 -8139395 + Gypsy2_I LTR Gypsy 595 678 -5457 1 744 21 0 0 0 chrUextra 20865566 20865587 -8139069 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 5813 12 0 0 chrUextra 20865786 20866459 -8138197 - IDEFIX_I LTR Gypsy -3103 2525 1853 1 744 3208 176 9 9 chrUextra 20866559 20867231 -8137425 + SAR_DM Satellite Satellite 390 1061 -411 1 744 496 0 18 0 chrUextra 20867332 20867389 -8137267 - ROO_I LTR Pao -2844 5412 5355 1 744 5464 5 0 0 chrUextra 20867376 20868005 -8136651 + ROO_I LTR Pao 2913 3541 -4715 1 744 2582 240 27 36 chrUextra 20868105 20869551 -8135105 + SAR_DM Satellite Satellite 1 1432 -396 1 744 622 164 8 0 chrUextra 20869653 20869775 -8134881 - SAR_DM Satellite Satellite -670 802 680 1 744 2546 169 9 13 chrUextra 20869786 20870324 -8134332 - SAR_DM Satellite Satellite -479 993 458 1 744 5985 6 3 0 chrUextra 20870424 20871094 -8133562 - MICROPIA_I LTR Gypsy -3224 1252 581 1 744 2470 104 18 18 chrUextra 20871197 20871868 -8132788 - DMSAT6 Satellite Satellite -37 671 1 1 744 531 190 0 0 chrUextra 20872506 20872643 -8132013 + (CATAA)n Simple_repeat Simple_repeat 2 138 0 1 744 6110 1 1 0 chrUextra 20872745 20873416 -8131240 - SSU-rRNA_Dme rRNA rRNA 0 1995 1324 1 744 3438 156 9 9 chrUextra 20873521 20874189 -8130467 - SAR_DM Satellite Satellite -425 1047 380 1 744 4712 63 46 40 chrUextra 20874289 20874962 -8129694 - CIRCE LINE Composite -5435 921 245 1 744 367 74 0 0 chrUextra 20875062 20875116 -8129540 + QUASIMODO_I LTR Gypsy 5122 5175 -885 1 744 1724 38 0 0 chrUextra 20875125 20875362 -8129294 + QUASIMODO_I LTR Gypsy 5491 5727 -333 1 744 1036 163 67 50 chrUextra 20875456 20875735 -8128921 + QUASIMODO_LTR LTR Gypsy 63 480 -178 1 744 22 56 0 0 chrUextra 20877439 20877475 -8127181 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 269 125 0 0 chrUextra 20877488 20877528 -8127128 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 236 175 0 0 chrUextra 20877571 20877611 -8127045 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 262 150 0 0 chrUextra 20877663 20877703 -8126953 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 262 150 0 0 chrUextra 20877755 20877795 -8126861 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 22 56 0 0 chrUextra 20877800 20877836 -8126820 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 1329 0 0 0 chrUextra 20877908 20878054 -8126602 - LSU-rRNA_Dme rRNA rRNA 0 3900 3755 1 744 3039 137 14 12 chrUextra 20878154 20878770 -8125886 + Gypsy2_I LTR Gypsy 1375 2044 -4968 1 744 2863 172 43 13 chrUextra 20878928 20879599 -8125057 - SAR_DM Satellite Satellite -500 972 282 1 744 913 28 0 0 chrUextra 20879700 20879807 -8124849 - LSU-rRNA_Dme rRNA rRNA -1211 2689 2583 1 744 4238 34 10 0 chrUextra 20879799 20880306 -8124350 - R2_DM LINE R2 -2 3605 3094 1 744 596 0 0 0 chrUextra 20880305 20880373 -8124283 - R2_DM LINE R2 -646 2961 2894 1 744 6027 0 0 5 chrUextra 20880473 20881146 -8123510 + HMSBEAGLE_I LTR Gypsy 972 1641 -4888 1 744 2939 182 25 9 chrUextra 20881250 20881919 -8122737 - SAR_DM Satellite Satellite -581 891 212 1 744 3174 185 7 6 chrUextra 20882019 20882692 -8121964 - SAR_DM Satellite Satellite -543 929 256 1 744 1817 234 140 6 chrUextra 20882825 20883454 -8121202 + BS LINE Jockey 2021 2733 -2393 1 744 3346 168 8 8 chrUextra 20883571 20884238 -8120418 - SAR_DM Satellite Satellite -425 1047 381 1 744 2930 179 9 21 chrUextra 20884338 20885011 -8119645 + SAR_DM Satellite Satellite 446 1110 -362 1 744 586 52 0 0 chrUextra 20885112 20885189 -8119467 + ARS406_DM Unknown Unknown 83 159 -194 1 744 2836 160 18 7 chrUextra 20885195 20885761 -8118895 - SAR_DM Satellite Satellite -569 903 332 1 744 2321 205 72 35 chrUextra 20885885 20886552 -8118104 - Gypsy12_LTR LTR Gypsy -250 2086 1395 1 744 5848 22 7 0 chrUextra 20886658 20887330 -8117326 + R2_DM LINE R2 1894 2570 -1037 1 744 2101 180 81 45 chrUextra 20887464 20887998 -8116658 - TAHRE LINE telomeric -2867 7596 7044 1 744 832 57 0 0 chrUextra 20887997 20888103 -8116553 - TAHRE LINE telomeric -12 10451 10346 1 744 1813 21 17 17 chrUextra 20888243 20888483 -8116173 + NTS_DM Other Other 1 240 0 1 744 1835 17 17 17 chrUextra 20888483 20888723 -8115933 + NTS_DM Other Other 1 240 0 1 744 1251 20 0 7 chrUextra 20888723 20888876 -8115780 + NTS_DM Other Other 1 152 -88 1 744 5730 19 7 6 chrUextra 20888976 20889649 -8115007 + FW_DM LINE Jockey 3820 4493 -199 1 744 2043 43 16 0 chrUextra 20889749 20890002 -8114654 - DIVER2_I LTR Pao -172 3975 3719 1 744 1610 29 0 99 chrUextra 20889979 20890212 -8114444 - DIVER2_I LTR Pao -2572 1575 1366 1 744 23 0 0 0 chrUextra 20890356 20890379 -8114277 + AT_rich Low_complexity Low_complexity 1 23 0 1 744 554 194 24 16 chrUextra 20891445 20891571 -8113085 - HETRP_DM Satellite Satellite -197 1675 1549 1 744 192 40 0 0 chrUextra 20891571 20891596 -8113060 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 744 702 186 14 14 chrUextra 20891722 20891869 -8112787 - HETRP_DM Satellite Satellite -197 1675 1529 1 744 381 307 7 7 chrUextra 20892097 20892238 -8112418 + Invader3_I LTR Gypsy 2889 3029 -1859 1 744 6026 10 0 0 chrUextra 20892841 20893514 -8111142 + DM1731_I LTR Copia 1311 1983 -1993 1 744 800 49 0 0 chrUextra 20893615 20893717 -8110939 - BATUMI_I LTR Pao -1435 6528 6427 1 744 3971 68 20 4 chrUextra 20893729 20894287 -8110369 + BATUMI_I LTR Pao 7298 7864 -99 1 744 3030 174 15 19 chrUextra 20894392 20895060 -8109596 - SAR_DM Satellite Satellite -610 862 198 1 744 4649 39 116 18 chrUextra 20895161 20895833 -8108823 - BATUMI_I LTR Pao -5998 1965 1228 1 744 3100 178 9 7 chrUextra 20895933 20896605 -8108051 - SAR_DM Satellite Satellite -588 884 212 1 744 2615 217 24 6 chrUextra 20896706 20897379 -8107277 + SAR_DM Satellite Satellite 195 879 -593 1 744 3182 46 43 169 chrUextra 20897554 20898152 -8106504 + CIRCE LINE Composite 973 1495 -4861 1 744 639 24 12 12 chrUextra 20898252 20898321 -8106335 - DM412B_LTR LTR Gypsy -6518 379 311 1 744 5034 9 2 2 chrUextra 20898321 20898891 -8105765 - DM412B_LTR LTR Gypsy 0 571 2 1 744 5406 0 0 0 chrUextra 20899050 20899698 -8104958 - DM176_I LTR Gypsy 0 6420 5773 1 744 3180 169 11 9 chrUextra 20899802 20900471 -8104185 + SAR_DM Satellite Satellite 192 861 -611 1 744 370 314 27 11 chrUextra 20900580 20900767 -8103889 - XDMR Unknown Unknown -171 190 1 1 744 1238 282 28 27 chrUextra 20900618 20901216 -8103440 + SAR_DM Satellite Satellite 208 806 -666 1 744 5019 70 6 7 chrUextra 20901344 20902017 -8102639 - R1_DM LINE R1 -4605 751 80 1 744 5139 46 13 3 chrUextra 20902117 20902790 -8101866 + MDG1_I LTR Gypsy 1131 1810 -4786 1 744 3048 176 12 6 chrUextra 20903668 20904314 -8100342 - SAR_DM Satellite Satellite -577 895 246 1 744 3268 39 44 0 chrUextra 20904436 20904848 -8099808 + TRANSIB2 DNA Transib 1420 1849 -995 1 744 1658 94 0 4 chrUextra 20904873 20905109 -8099547 + MICROPIA_I LTR Gypsy 3882 4116 -360 1 744 5497 18 1 1 chrUextra 20905209 20905882 -8098774 + QUASIMODO_I LTR Gypsy 4511 5183 -877 1 744 5806 30 0 0 chrUextra 20905982 20906655 -8098001 - MAX_I LTR Pao -3033 4881 4209 1 744 3042 181 10 9 chrUextra 20906758 20907428 -8097228 - SAR_DM Satellite Satellite -593 879 209 1 744 1740 15 0 0 chrUextra 20907528 20907730 -8096926 - QUASIMODO_LTR LTR Gypsy -304 354 153 1 744 3578 15 6 0 chrUextra 20907726 20908201 -8096455 - QUASIMODO_I LTR Gypsy -74 5986 5509 1 744 6092 1 0 1 chrUextra 20908301 20908974 -8095682 + SSU-rRNA_Dme rRNA rRNA 461 1132 -863 1 744 28 48 0 0 chrUextra 20909288 20909330 -8095326 + AT_rich Low_complexity Low_complexity 1 42 0 1 744 32 0 0 0 chrUextra 20909658 20909690 -8094966 + AT_rich Low_complexity Low_complexity 1 32 0 1 744 2995 174 12 11 chrUextra 20909864 20910515 -8094141 - SAR_DM Satellite Satellite -396 1076 425 1 744 2255 176 7 10 chrUextra 20910622 20911277 -8093379 + SAR_DM Satellite Satellite 1 653 -677 1 744 2412 99 18 66 chrUextra 20911399 20912065 -8092591 - DMSAT6 Satellite Satellite 0 634 1 1 744 1725 171 59 56 chrUextra 20912182 20912829 -8091827 + HETA LINE telomeric 1 616 -5465 1 744 394 0 0 162 chrUextra 20912942 20913548 -8091108 + (TATAG)n Simple_repeat Simple_repeat 1 508 0 1 744 5854 6 5 0 chrUextra 20913712 20914385 -8090271 + STALKER4_I LTR Gypsy 1924 2599 -3931 1 744 6143 3 1 0 chrUextra 20914485 20915158 -8089498 + LSU-rRNA_Dme rRNA rRNA 2953 3626 -274 1 744 4726 51 46 0 chrUextra 20915283 20915930 -8088726 + PROTOP DNA P 74 750 -3730 1 744 2739 180 14 27 chrUextra 20916039 20916702 -8087954 - SAR_DM Satellite Satellite -354 1118 465 1 744 1870 176 6 6 chrUextra 20916804 20917477 -8087179 - SAR_DM Satellite Satellite -589 673 1 1 744 5800 22 0 0 chrUextra 20917577 20918250 -8086406 + R1_DM LINE R1 3865 4537 -819 1 744 1071 50 7 0 chrUextra 20918350 20918489 -8086167 - Baggins1 LINE LOA -523 4930 4791 1 744 2928 40 21 19 chrUextra 20918645 20919023 -8085633 - R1_DM LINE R1 -3113 2243 1865 1 744 5270 27 77 0 chrUextra 20919123 20919796 -8084860 - IDEFIX_I LTR Gypsy -4086 1542 818 1 744 911 90 0 0 chrUextra 20919907 20920040 -8084616 - ARS406_DM Unknown Unknown -164 189 57 1 744 2583 179 9 11 chrUextra 20920006 20920569 -8084087 + SAR_DM Satellite Satellite 345 906 -566 1 744 32 0 0 0 chrUextra 20920974 20921006 -8083650 + AT_rich Low_complexity Low_complexity 1 32 0 1 744 1803 5 0 5 chrUextra 20921138 20921342 -8083314 + SSU-rRNA_Dme rRNA rRNA 1 203 -1792 1 744 5553 13 5 0 chrUextra 20921442 20922069 -8082587 + DMRT1B LINE R1 4554 5183 0 1 744 356 0 0 0 chrUextra 20922071 20922115 -8082541 + QUASIMODO_LTR LTR Gypsy 55 98 -560 1 744 5846 22 0 0 chrUextra 20922215 20922888 -8081768 - R1_DM LINE R1 -1566 3790 3118 1 744 6072 1 1 1 chrUextra 20922988 20923661 -8080995 + SSU-rRNA_Dme rRNA rRNA 592 1264 -731 1 744 4693 9 0 0 chrUextra 20924655 20925207 -8079449 + IDEFIX_I LTR Gypsy 4266 4817 -811 1 744 2949 155 8 9 chrUextra 20926160 20926742 -8077914 + Jockey2 LINE Jockey 1419 1820 -1608 1 744 6073 0 1 1 chrUextra 20926853 20927526 -8077130 + DOC LINE Jockey 2246 2918 -1807 1 744 5416 48 1 1 chrUextra 20927626 20928299 -8076357 - R1_DM LINE R1 -4043 1313 641 1 744 5307 2 0 2 chrUextra 20928484 20929072 -8075584 + DMRT1B LINE R1 1 587 -4596 1 744 2883 190 8 8 chrUextra 20929172 20929808 -8074848 - SAR_DM Satellite Satellite -642 830 195 1 744 807 115 0 0 chrUextra 20929715 20929845 -8074811 + ARS406_DM Unknown Unknown 1 130 -223 1 744 4554 30 153 0 chrUextra 20929947 20930618 -8074038 - MAX_I LTR Pao -5579 2335 1562 1 744 1024 30 0 0 chrUextra 20930718 20930849 -8073807 - NTS_DM Other Other -72 168 38 1 744 907 9 0 27 chrUextra 20930849 20930961 -8073695 - NTS_DM Other Other -107 133 25 1 744 1304 18 0 6 chrUextra 20931013 20931178 -8073478 - NTS_DM Other Other -39 201 38 1 744 907 9 0 27 chrUextra 20931178 20931290 -8073366 - NTS_DM Other Other -107 133 25 1 744 22 56 0 0 chrUextra 20931316 20931352 -8073304 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 1958 174 9 9 chrUextra 20931491 20932164 -8072492 + SAR_DM Satellite Satellite 1 672 -677 1 744 5781 9 0 12 chrUextra 20932264 20932937 -8071719 - DM176_I LTR Gypsy -3235 3185 2521 1 744 28 48 0 0 chrUextra 20933330 20933372 -8071284 + AT_rich Low_complexity Low_complexity 1 42 0 1 744 310 82 0 20 chrUextra 20933953 20934003 -8070653 - HMSBEAGLE_I LTR Gypsy -6308 221 173 1 744 230 105 0 0 chrUextra 20934029 20934067 -8070589 - HMSBEAGLE_I LTR Gypsy -6491 38 1 1 744 978 173 102 15 chrUextra 20934066 20934271 -8070385 - DMLTR5 LTR Gypsy 0 266 44 1 744 2466 206 12 37 chrUextra 20934584 20935256 -8069400 - SAR_DM Satellite Satellite -361 1111 457 1 744 5744 15 5 0 chrUextra 20936902 20937575 -8067081 - STALKER4_I LTR Gypsy -3819 2711 2036 1 744 3100 178 8 9 chrUextra 20937676 20938329 -8066327 + SAR_DM Satellite Satellite 425 1076 -396 1 744 5827 1 0 3 chrUextra 20938448 20939121 -8065535 - LSU-rRNA_Dme rRNA rRNA -2946 954 284 1 744 946 178 102 15 chrUextra 20939343 20939548 -8065108 + DMLTR5 LTR Gypsy 44 266 0 1 744 372 49 65 16 chrUextra 20939547 20939609 -8065047 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 744 259 128 0 21 chrUextra 20939631 20939679 -8064977 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 744 234 0 0 0 chrUextra 20939864 20939890 -8064766 + (T)n Simple_repeat Simple_repeat 1 26 0 1 744 3165 180 7 7 chrUextra 20939994 20940667 -8063989 - SAR_DM Satellite Satellite -594 878 206 1 744 1554 263 60 9 chrUextra 20940767 20941438 -8063218 - Invader6_I LTR Gypsy -1779 2320 1102 1 744 204 40 0 0 chrUextra 20941691 20941716 -8062940 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 744 1841 49 0 0 chrUextra 20941916 20942142 -8062514 + PROTOP DNA P 74 299 -4181 1 744 448 27 68 0 chrUextra 20942129 20942203 -8062453 + PROTOP DNA P 522 600 -3880 1 744 25 0 0 0 chrUextra 20942606 20942631 -8062025 + AT_rich Low_complexity Low_complexity 1 25 0 1 744 1342 12 6 6 chrUextra 20942820 20942986 -8061670 - IDEFIX_LTR LTR Gypsy 0 594 429 1 744 3075 175 9 9 chrUextra 20943112 20943759 -8060897 - SAR_DM Satellite Satellite -397 1075 429 1 744 5558 16 0 0 chrUextra 20944632 20945305 -8059351 + FW_DM LINE Jockey 2300 2972 -1720 1 744 2175 89 5 39 chrUextra 20945406 20946073 -8058583 - DMSAT6 Satellite Satellite -153 643 1 1 744 2766 181 24 6 chrUextra 20946181 20946838 -8057818 + SAR_DM Satellite Satellite 407 1075 -397 1 744 5219 3 0 2 chrUextra 20946951 20947563 -8057093 - FW_DM LINE Jockey -4081 611 1 1 744 5217 2 2 0 chrUextra 20947724 20948326 -8056330 - LSU-rRNA_Dme rRNA rRNA -1510 2390 1788 1 744 3135 24 5 44 chrUextra 20948734 20949170 -8055486 + CIRCE LINE Composite 4981 5399 -957 1 744 4904 37 128 6 chrUextra 20949270 20949943 -8054713 - BATUMI_I LTR Pao -2295 5668 4914 1 744 4788 2 0 0 chrUextra 20950043 20950604 -8054052 + ROO_I LTR Pao 5471 6031 -2225 1 744 1008 9 0 0 chrUextra 20950600 20950716 -8053940 + ROO_I LTR Pao 7473 7588 -668 1 744 5741 6 0 0 chrUextra 20950816 20951489 -8053167 - DMRT1A LINE R1 -3309 1874 1202 1 744 2758 176 19 24 chrUextra 20951589 20952259 -8052397 - SAR_DM Satellite Satellite -597 875 209 1 744 21 57 0 0 chrUextra 20952425 20952460 -8052196 + AT_rich Low_complexity Low_complexity 1 35 0 1 744 4342 0 6 0 chrUextra 20952532 20953035 -8051621 - LSU-rRNA_Dme rRNA rRNA 0 3900 3395 1 744 5788 1 9 0 chrUextra 20953135 20953808 -8050848 - Copia2_I LTR Copia -2932 1230 552 1 744 5738 0 0 1 chrUextra 20953908 20954581 -8050075 + LSU-rRNA_Dme rRNA rRNA 509 1180 -2720 1 744 348 214 24 0 chrUextra 20954703 20954787 -8049869 + HOBO DNA hAT 194 279 -2737 1 744 2460 41 84 0 chrUextra 20954811 20955155 -8049501 + PROTOP_B DNA P 1 373 -780 1 744 998 58 17 0 chrUextra 20955181 20955354 -8049302 + PROTOP DNA P 541 717 -3763 1 744 920 63 6 19 chrUextra 20955473 20956127 -8048529 + RSP Satellite Satellite 1 645 0 1 744 980 305 25 30 chrUextra 20956256 20956872 -8047784 + BLOOD_I LTR Gypsy 1799 2465 -4148 1 744 5582 0 1 5 chrUextra 20957773 20958425 -8046231 + SSU-rRNA_Dme rRNA rRNA 855 1504 -491 1 744 400 57 0 0 chrUextra 20958546 20958599 -8046057 - DMCR1A LINE CR1 -3336 1134 1082 1 744 269 279 13 0 chrUextra 20959111 20959204 -8045452 - Gypsy5_I LTR Gypsy -3597 2912 2836 1 744 228 152 0 0 chrUextra 20959319 20959365 -8045291 - ARS406_DM Unknown Unknown -307 46 1 1 744 2946 178 8 8 chrUextra 20959325 20959983 -8044673 + SAR_DM Satellite Satellite 246 903 -569 1 744 5760 0 1 5 chrUextra 20960092 20960765 -8043891 - SSU-rRNA_Dme rRNA rRNA -480 1515 845 1 744 5677 0 9 0 chrUextra 20960865 20961538 -8043118 - ROO_I LTR Pao -3801 4455 3777 1 744 1620 0 0 0 chrUextra 20962131 20962311 -8042345 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 744 4561 0 0 0 chrUextra 20962411 20962934 -8041722 + R1_DM LINE R1 4834 5356 0 1 744 1313 7 0 0 chrUextra 20962932 20963084 -8041572 + LSU-rRNA_Dme rRNA rRNA 2640 2791 -1109 1 744 5890 0 0 1 chrUextra 20963184 20963857 -8040799 + SSU-rRNA_Dme rRNA rRNA 236 907 -1088 1 744 5803 3 1 1 chrUextra 20963957 20964630 -8040026 - SSU-rRNA_Dme rRNA rRNA -775 1220 548 1 744 3023 173 9 6 chrUextra 20964739 20965403 -8039253 - SAR_DM Satellite Satellite -577 895 230 1 744 2793 184 26 8 chrUextra 20965515 20966176 -8038480 - SAR_DM Satellite Satellite -396 1076 404 1 744 488 119 36 0 chrUextra 20966548 20966632 -8038024 - NTS_DM Other Other -150 90 4 1 744 1301 6 0 18 chrUextra 20966742 20966907 -8037749 - NTS_DM Other Other -78 162 1 1 744 5800 3 1 0 chrUextra 20967049 20967722 -8036934 - DOC LINE Jockey -900 3825 3152 1 744 349 138 0 0 chrUextra 20967839 20967897 -8036759 - HETRP_DM Satellite Satellite -286 1586 1529 1 744 584 214 7 14 chrUextra 20968039 20968181 -8036475 - HETRP_DM Satellite Satellite -203 1669 1529 1 744 487 240 0 16 chrUextra 20968331 20968454 -8036202 - HETRP_DM Satellite Satellite -203 1669 1549 1 744 336 24 0 0 chrUextra 20968454 20968495 -8036161 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 744 28 48 0 0 chrUextra 20968816 20968858 -8035798 + AT_rich Low_complexity Low_complexity 1 42 0 1 744 465 131 36 0 chrUextra 20969131 20969215 -8035441 - NTS_DM Other Other -150 90 4 1 744 246 150 0 0 chrUextra 20969387 20969427 -8035229 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 29 28 0 0 chrUextra 20969432 20969468 -8035188 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 4375 0 2 0 chrUextra 20969541 20970041 -8034615 - LSU-rRNA_Dme rRNA rRNA 0 3900 3400 1 744 5747 18 0 0 chrUextra 20970141 20970814 -8033842 - R2_DM LINE R2 -2033 1574 902 1 744 488 119 36 0 chrUextra 20970961 20971045 -8033611 - NTS_DM Other Other -150 90 4 1 744 1301 6 0 18 chrUextra 20971155 20971320 -8033336 - NTS_DM Other Other -78 162 1 1 11 1829 8 17 13 chrUextra 20971320 20971559 -8033097 - NTS_DM Other Other 0 240 1 1 745 745 97 8 0 chrUextra 20971687 20971811 -8032845 - ARS406_DM Unknown Unknown -228 125 1 1 745 2841 174 14 9 chrUextra 20971705 20972360 -8032296 + SAR_DM Satellite Satellite 180 837 -635 1 745 216 0 0 0 chrUextra 20972883 20972907 -8031749 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 745 472 184 12 101 chrUextra 20972917 20973086 -8031570 + TOM_I LTR Gypsy 1 154 -5958 1 745 5694 1 5 6 chrUextra 20973232 20973904 -8030752 - SSU-rRNA_Dme rRNA rRNA -319 1676 1006 1 745 4918 60 12 6 chrUextra 20974004 20974675 -8029981 - R1_DM LINE R1 -3172 2184 1510 1 745 2815 169 32 20 chrUextra 20974780 20975444 -8029212 + SAR_DM Satellite Satellite 224 895 -577 1 745 1330 137 4 4 chrUextra 20975548 20975782 -8028874 + TART LINE telomeric 3650 3883 -10594 1 745 2653 100 4 57 chrUextra 20975762 20976218 -8028438 + TART LINE telomeric 5323 5754 -8723 1 745 1708 0 0 0 chrUextra 20976320 20976517 -8028139 - LSU-rRNA_Dme rRNA rRNA -3703 197 1 1 745 21 95 0 0 chrUextra 20976529 20976592 -8028064 + AT_rich Low_complexity Low_complexity 1 63 0 1 745 34 24 0 0 chrUextra 20976805 20976846 -8027810 + AT_rich Low_complexity Low_complexity 1 41 0 1 745 3685 74 9 0 chrUextra 20977092 20977764 -8026892 - DM297_I LTR Gypsy -2743 3424 2709 1 745 4840 3 0 2 chrUextra 20977864 20978433 -8026223 - QUASIMODO_LTR LTR Gypsy -90 568 1 1 745 777 48 0 0 chrUextra 20978433 20978536 -8026120 - QUASIMODO_I LTR Gypsy 0 6060 5958 1 745 27 62 0 0 chrUextra 20978757 20978805 -8025851 + AT_rich Low_complexity Low_complexity 1 48 0 1 745 499 259 24 12 chrUextra 20978852 20979019 -8025637 - Copia_I LTR Copia -266 4327 4159 1 745 622 216 45 79 chrUextra 20979019 20979286 -8025370 - ROVER-LTR_DM LTR Gypsy 0 367 110 1 745 5750 0 0 0 chrUextra 20979408 20980080 -8024576 - ROO_I LTR Pao -1548 6708 6037 1 745 2113 97 132 21 chrUextra 20980192 20980679 -8023977 - Invader2_I LTR Gypsy -567 4025 3419 1 745 1245 47 18 0 chrUextra 20980679 20980850 -8023806 + IDEFIX_LTR LTR Gypsy 1 174 -420 1 745 5656 0 0 1 chrUextra 20980952 20981624 -8023032 - LSU-rRNA_Dme rRNA rRNA -2876 1024 354 1 745 5445 3 18 0 chrUextra 20981724 20982396 -8022260 + MDG1_I LTR Gypsy 1053 1736 -4860 1 745 5446 27 1 0 chrUextra 20982496 20983168 -8021488 - R1_DM LINE R1 -2401 2955 2283 1 745 2853 179 9 9 chrUextra 20983269 20983933 -8020723 - SAR_DM Satellite Satellite -614 858 195 1 745 5537 6 0 0 chrUextra 20984040 20984712 -8019944 + QUASIMODO_I LTR Gypsy 972 1643 -4417 1 745 5830 0 5 0 chrUextra 20984812 20985484 -8019172 + DOC LINE Jockey 3213 3887 -838 1 745 5256 36 1 7 chrUextra 20985584 20986256 -8018400 + MAX_I LTR Pao 2529 3196 -4718 1 745 5697 0 0 0 chrUextra 20986356 20987028 -8017628 + DM176_I LTR Gypsy 722 1393 -5027 1 745 2905 35 5 11 chrUextra 20987128 20987506 -8017150 - BATUMI_I LTR Pao -5590 2373 1998 1 745 838 0 10 0 chrUextra 20987506 20987606 -8017050 - DM1731_I LTR Copia -3875 101 1 1 745 1287 57 0 6 chrUextra 20987606 20987781 -8016875 - DM1731_LTR LTR Copia 0 336 163 1 745 615 96 11 0 chrUextra 20987900 20987994 -8016662 - R1_DM LINE R1 -5261 95 1 1 745 4477 24 2 0 chrUextra 20988027 20988572 -8016084 - R1_DM LINE R1 0 5356 4811 1 745 2298 116 17 13 chrUextra 20988672 20989310 -8015346 + DMSAT6 Satellite Satellite 1 640 -40 1 745 1369 158 18 21 chrUextra 20989830 20990114 -8014542 - PROTOP_B DNA P -4 1149 867 1 745 460 176 392 0 chrUextra 20990222 20990431 -8014225 + PROTOP DNA P 3959 4248 -232 1 745 280 291 131 13 chrUextra 20990575 20990728 -8013928 - MICROPIA_I LTR Gypsy -638 3838 3668 1 745 260 297 0 0 chrUextra 20990814 20990888 -8013768 - MICROPIA_I LTR Gypsy -682 3794 3721 1 745 1331 65 5 0 chrUextra 20990988 20991172 -8013484 - R1_DM LINE R1 -5171 185 1 1 745 3721 31 0 0 chrUextra 20991205 20991660 -8012996 - R1_DM LINE R1 0 5356 4902 1 745 2660 171 48 21 chrUextra 20991765 20992432 -8012224 + SAR_DM Satellite Satellite 321 1005 -467 1 745 2478 81 18 22 chrUextra 20992532 20993204 -8011452 - DMSAT6 Satellite Satellite -42 668 1 1 745 3922 59 58 27 chrUextra 20993309 20993976 -8010680 + STALKER4_I LTR Gypsy 872 1559 -4971 1 745 3841 15 0 0 chrUextra 20994076 20994531 -8010125 + MICROPIA_I LTR Gypsy 1237 1691 -2785 1 745 1828 9 0 0 chrUextra 20994536 20994748 -8009908 + MICROPIA_I LTR Gypsy 1876 2087 -2389 1 745 5472 10 0 1 chrUextra 20994848 20995520 -8009136 + STALKER4_I LTR Gypsy 2713 3383 -3147 1 745 5147 45 1 1 chrUextra 20995620 20996292 -8008364 - R1_DM LINE R1 -4064 1292 621 1 745 616 124 0 0 chrUextra 20996392 20996497 -8008159 - ARS406_DM Unknown Unknown -248 105 1 1 745 2860 177 15 9 chrUextra 20996404 20997064 -8007592 + SAR_DM Satellite Satellite 195 858 -614 1 745 5553 1 0 5 chrUextra 20997164 20997836 -8006820 + STALKER4_I LTR Gypsy 1180 1848 -4682 1 745 2912 176 11 9 chrUextra 20997937 20998606 -8006050 - SAR_DM Satellite Satellite -581 891 222 1 745 3064 159 8 14 chrUextra 20998718 20999380 -8005276 + SAR_DM Satellite Satellite 195 852 -620 1 745 1368 195 119 25 chrUextra 20999482 20999919 -8004737 + Gypsy12_LTR LTR Gypsy 1173 1650 -686 1 745 413 285 21 0 chrUextra 21000004 21000148 -8004508 + Gypsy12_LTR LTR Gypsy 1737 1883 -453 1 745 5883 9 1 0 chrUextra 21000252 21000924 -8003732 - MDG3_I LTR Gypsy -1445 3541 2869 1 745 455 271 51 50 chrUextra 21001380 21001423 -8003233 + Gypsy4_I LTR Gypsy 2576 2708 -3459 1 745 1609 9 24 0 chrUextra 21001423 21001636 -8003020 + TLD2 Unknown Unknown 1 218 0 1 745 455 271 51 50 chrUextra 21001636 21001696 -8002960 + Gypsy4_I LTR Gypsy 2709 2904 -3263 1 745 5977 0 0 1 chrUextra 21001796 21002468 -8002188 + MDG3_I LTR Gypsy 3026 3696 -1290 1 745 5656 5 18 1 chrUextra 21002568 21003240 -8001416 + MDG1_I LTR Gypsy 934 1616 -4980 1 745 5822 9 0 0 chrUextra 21003340 21004012 -8000644 - ROO_I LTR Pao -4432 3824 3153 1 745 787 92 8 0 chrUextra 21004112 21004232 -8000424 - ARS406_DM Unknown Unknown -232 121 1 1 745 2818 196 8 8 chrUextra 21004137 21004784 -7999872 + SAR_DM Satellite Satellite 192 838 -634 1 745 3063 187 16 6 chrUextra 21004884 21005556 -7999100 - SAR_DM Satellite Satellite -539 933 255 1 745 385 43 0 0 chrUextra 21005656 21005702 -7998954 + PROTOP_B DNA P 110 155 -998 1 745 4681 82 5 13 chrUextra 21005700 21006327 -7998329 + Gypsy12_I LTR Gypsy 4657 5278 -268 1 745 998 290 69 41 chrUextra 21006428 21007035 -7997621 + Copia2_I LTR Copia 1037 1660 -2502 1 745 5456 25 85 0 chrUextra 21007200 21007872 -7996784 - R1_DM LINE R1 -612 4744 4016 1 745 5259 48 6 1 chrUextra 21007972 21008644 -7996012 + HETA LINE telomeric 4014 4688 -1393 1 745 5636 19 0 3 chrUextra 21009516 21010188 -7994468 + CIRCE LINE Composite 4107 4776 -1580 1 745 5270 38 1 15 chrUextra 21010288 21010960 -7993696 - BATUMI_I LTR Pao -4678 3285 2623 1 745 6045 1 0 1 chrUextra 21011064 21011732 -7992924 + LSU-rRNA_Dme rRNA rRNA 1788 2454 -1446 1 745 2264 37 4 0 chrUextra 21011833 21012104 -7992552 + PROTOP_B DNA P 889 1153 0 1 745 29 60 0 0 chrUextra 21012446 21012496 -7992160 + AT_rich Low_complexity Low_complexity 1 50 0 1 745 3684 59 43 0 chrUextra 21012604 21013119 -7991537 + PROTOP_A DNA P 578 1105 0 1 745 384 58 0 0 chrUextra 21013382 21013434 -7991222 + PROTOP_A DNA P 249 300 -805 1 745 3289 57 73 0 chrUextra 21013421 21014048 -7990608 + PROTOP_A DNA P 520 1057 -48 1 745 558 214 0 8 chrUextra 21014153 21014271 -7990385 - HETRP_DM Satellite Satellite -227 1645 1529 1 745 678 193 14 14 chrUextra 21014433 21014580 -7990076 - HETRP_DM Satellite Satellite -197 1675 1529 1 745 357 226 11 21 chrUextra 21014725 21014820 -7989836 - HETRP_DM Satellite Satellite -208 1664 1571 1 745 949 87 196 7 chrUextra 21014921 21015167 -7989489 + PROTOP_B DNA P 356 693 -460 1 745 517 36 84 0 chrUextra 21015162 21015245 -7989411 + PROTOP DNA P 770 859 -3621 1 745 2404 98 0 3 chrUextra 21015253 21015592 -7989064 - Jockey2 LINE Jockey -1608 1820 1483 1 745 21 57 0 0 chrUextra 21015940 21015975 -7988681 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 21 89 0 0 chrUextra 21016013 21016069 -7988587 + AT_rich Low_complexity Low_complexity 1 56 0 1 745 2523 95 25 46 chrUextra 21016471 21017122 -7987534 - DMSAT6 Satellite Satellite -37 637 1 1 745 1608 181 9 19 chrUextra 21017280 21017596 -7987060 + DM176_I LTR Gypsy 3969 4281 -2139 1 745 1166 29 0 0 chrUextra 21017595 21017732 -7986924 - DMCR1A LINE CR1 -3534 936 800 1 745 794 54 80 0 chrUextra 21017730 21017842 -7986814 - DMCR1A LINE CR1 -4063 407 287 1 745 319 62 42 0 chrUextra 21017860 21017908 -7986748 - DMCR1A LINE CR1 -4152 318 269 1 745 5608 12 72 6 chrUextra 21018008 21018678 -7985978 - FW_DM LINE Jockey -513 4179 3466 1 745 1448 80 8 23 chrUextra 21018780 21019036 -7985620 + DMSAT6 Satellite Satellite 187 438 -32 1 745 3806 25 0 0 chrUextra 21019552 21019997 -7984659 - R1_DM LINE R1 -2518 2838 2394 1 745 1888 22 9 0 chrUextra 21019999 21020224 -7984432 - R1_DM LINE R1 -3291 2065 1839 1 745 3084 179 8 8 chrUextra 21020325 21020980 -7983676 + SAR_DM Satellite Satellite 422 1076 -396 1 745 1503 67 3 1 chrUextra 21021103 21021766 -7982890 + (CTATT)n Simple_repeat Simple_repeat 1 663 0 1 745 601 26 0 0 chrUextra 21021868 21021945 -7982711 + NTS_DM Other Other 57 133 -107 1 745 1304 18 0 6 chrUextra 21021945 21022110 -7982546 + NTS_DM Other Other 38 201 -39 1 745 21 57 0 0 chrUextra 21022110 21022145 -7982511 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 870 9 9 27 chrUextra 21022171 21022282 -7982374 + NTS_DM Other Other 25 133 -107 1 745 851 0 0 0 chrUextra 21022282 21022378 -7982278 + NTS_DM Other Other 38 133 -107 1 745 1253 25 0 6 chrUextra 21022378 21022540 -7982116 + NTS_DM Other Other 38 198 -42 1 745 6121 0 0 1 chrUextra 21022640 21023312 -7981344 - BATUMI_I LTR Pao -2389 5574 4904 1 745 3611 26 2 16 chrUextra 21023412 21023846 -7980810 + G5_DM LINE Jockey 4429 4856 0 1 745 842 72 0 18 chrUextra 21023850 21024074 -7980582 - RSP Satellite Satellite -13 220 1 1 745 5290 56 1 11 chrUextra 21024188 21024856 -7979800 + R1_DM LINE R1 1086 1747 -3609 1 745 5888 18 0 0 chrUextra 21024956 21025625 -7979031 - MICROPIA_I LTR Gypsy -2055 2421 1766 1 745 1762 5 14 5 chrUextra 21025731 21025944 -7978712 - NTS_DM Other Other -25 215 1 1 745 1813 21 17 17 chrUextra 21025944 21026184 -7978472 - NTS_DM Other Other 0 240 1 1 745 1584 14 23 19 chrUextra 21026184 21026400 -7978256 - NTS_DM Other Other 0 240 24 1 745 2210 8 0 0 chrUextra 21026500 21026765 -7977891 + DOC LINE Jockey 4460 4724 -1 1 745 1983 173 10 7 chrUextra 21026765 21027172 -7977484 + SAR_DM Satellite Satellite 346 753 -719 1 745 2933 184 8 11 chrUextra 21027292 21027944 -7976712 - SAR_DM Satellite Satellite -396 1076 427 1 745 1858 0 17 17 chrUextra 21028044 21028279 -7976377 - NTS_DM Other Other -5 235 1 1 745 1930 4 17 13 chrUextra 21028279 21028518 -7976138 - NTS_DM Other Other 0 240 1 1 745 1398 21 25 20 chrUextra 21028518 21028716 -7975940 - NTS_DM Other Other 0 240 42 1 745 434 196 0 18 chrUextra 21028817 21028926 -7975730 + XDMR_DM Unknown Unknown 254 360 0 1 745 2614 179 31 26 chrUextra 21028840 21029488 -7975168 - SAR_DM Satellite Satellite -353 1119 469 1 745 4448 80 7 6 chrUextra 21029588 21030250 -7974406 + Gypsy2_I LTR Gypsy 1211 1931 -5081 1 745 5756 21 22 0 chrUextra 21030360 21031032 -7973624 - R1_DM LINE R1 -1637 3719 3033 1 745 5876 12 21 1 chrUextra 21031132 21031804 -7972852 + ACCORD2_I LTR Gypsy 130 814 -6398 1 745 5650 22 16 0 chrUextra 21031904 21032576 -7972080 - DOC2_DM LINE Jockey -1623 3170 2488 1 745 334 93 0 0 chrUextra 21032676 21032730 -7971926 - FB4_DM DNA Tc1 -128 3961 3908 1 745 261 33 0 0 chrUextra 21032739 21032769 -7971887 - Baggins1 LINE LOA -697 4756 4727 1 745 27 29 0 0 chrUextra 21033008 21033042 -7971614 + AT_rich Low_complexity Low_complexity 1 34 0 1 745 698 179 14 20 chrUextra 21033526 21033674 -7970982 + HETRP_DM Satellite Satellite 1529 1675 -197 1 745 426 20 0 0 chrUextra 21033799 21033850 -7970806 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 745 530 238 8 16 chrUextra 21033850 21033978 -7970678 + HETRP_DM Satellite Satellite 1549 1675 -197 1 745 1134 23 0 0 chrUextra 21033990 21034120 -7970536 - Invader1_LTR LTR Gypsy 0 423 294 1 745 5769 22 5 0 chrUextra 21034220 21034892 -7969764 - R1_DM LINE R1 -2152 3204 2530 1 745 781 9 0 28 chrUextra 21034992 21035101 -7969555 + NTS_DM Other Other 57 162 -78 1 745 514 119 36 0 chrUextra 21035211 21035295 -7969361 + NTS_DM Other Other 4 90 -150 1 745 28 48 0 0 chrUextra 21035568 21035610 -7969046 + AT_rich Low_complexity Low_complexity 1 42 0 1 745 1307 12 0 24 chrUextra 21035810 21035976 -7968680 - NTS_DM Other Other -78 162 1 1 745 1926 4 17 13 chrUextra 21035976 21036215 -7968441 - NTS_DM Other Other 0 240 1 1 745 1744 5 18 14 chrUextra 21036215 21036436 -7968220 - NTS_DM Other Other 0 240 19 1 745 434 0 62 46 chrUextra 21036536 21036601 -7968055 + NTS_DM Other Other 175 240 0 1 745 1930 4 17 13 chrUextra 21036601 21036840 -7967816 + NTS_DM Other Other 1 240 0 1 745 1940 0 17 13 chrUextra 21036840 21037079 -7967577 + NTS_DM Other Other 1 240 0 1 745 1136 8 0 0 chrUextra 21037079 21037208 -7967448 + NTS_DM Other Other 1 129 -111 1 745 380 183 0 24 chrUextra 21037308 21037392 -7967264 - HETRP_DM Satellite Satellite -262 1610 1529 1 745 735 199 7 7 chrUextra 21037556 21037703 -7966953 - HETRP_DM Satellite Satellite -197 1675 1529 1 745 439 233 10 10 chrUextra 21037875 21037979 -7966677 - HETRP_DM Satellite Satellite -197 1675 1572 1 745 5510 6 40 0 chrUextra 21038080 21038752 -7965904 + PROTOP_A DNA P 187 885 -220 1 745 6046 0 0 0 chrUextra 21038852 21039524 -7965132 + FW_DM LINE Jockey 2862 3533 -1159 1 745 989 86 9 21 chrUextra 21039634 21040296 -7964360 + RSP Satellite Satellite 1 654 0 1 745 2921 172 34 21 chrUextra 21040399 21041068 -7963588 - SAR_DM Satellite Satellite -549 923 246 1 745 5988 5 1 1 chrUextra 21041168 21041840 -7962816 + DM1731_I LTR Copia 37 708 -3268 1 745 3130 178 8 8 chrUextra 21041943 21042599 -7962057 + SAR_DM Satellite Satellite 282 937 -535 1 745 1946 314 2 2 chrUextra 21042716 21043344 -7961312 - Invader1_I LTR Gypsy -1094 2092 1465 1 745 3064 170 27 11 chrUextra 21043496 21044155 -7960501 + SAR_DM Satellite Satellite 369 1038 -434 1 745 25 0 0 0 chrUextra 21044728 21044753 -7959903 + AT_rich Low_complexity Low_complexity 1 25 0 1 745 5550 37 0 0 chrUextra 21045028 21045700 -7958956 - MDG1_I LTR Gypsy -2554 4042 3371 1 745 2887 178 43 12 chrUextra 21045804 21046470 -7958186 - SAR_DM Satellite Satellite -514 958 272 1 745 5391 24 74 1 chrUextra 21047344 21048016 -7956640 - R1_DM LINE R1 -1045 4311 3591 1 745 2142 141 66 24 chrUextra 21048220 21048788 -7955868 - STALKER4_I LTR Gypsy -5531 999 359 1 745 5880 1 0 0 chrUextra 21048888 21049560 -7955096 - HMSBEAGLE_I LTR Gypsy -5803 726 55 1 745 3555 255 44 29 chrUextra 21049660 21051099 -7953557 - SAR_DM Satellite Satellite -397 1460 1 1 745 4381 2 0 2 chrUextra 21051204 21051690 -7952966 + R1_DM LINE R1 4872 5356 0 1 745 1685 11 0 0 chrUextra 21051688 21051876 -7952780 + LSU-rRNA_Dme rRNA rRNA 2640 2827 -1073 1 745 6021 7 0 1 chrUextra 21051976 21052648 -7952008 + Gypsy2_I LTR Gypsy 5024 5694 -441 1 745 5781 3 1 1 chrUextra 21052748 21053420 -7951236 + IDEFIX_I LTR Gypsy 202 873 -4755 1 745 5580 31 9 1 chrUextra 21053520 21054192 -7950464 - R1_DM LINE R1 -105 5251 4575 1 745 5701 5 0 0 chrUextra 21054292 21054964 -7949692 - IDEFIX_I LTR Gypsy -1034 4594 3923 1 745 869 0 0 10 chrUextra 21055064 21055166 -7949490 + LSU-rRNA_Dme rRNA rRNA 1688 1788 -2112 1 745 4797 2 0 0 chrUextra 21055210 21055736 -7948920 + LSU-rRNA_Dme rRNA rRNA 1788 2313 -1587 1 745 5506 2 0 0 chrUextra 21055836 21056438 -7948218 + LSU-rRNA_Dme rRNA rRNA 2053 2654 -1246 1 745 351 0 0 0 chrUextra 21056467 21056508 -7948148 + R1_DM LINE R1 1 41 -5315 1 745 1587 12 0 0 chrUextra 21056608 21056855 -7947801 + (TAA)n Simple_repeat Simple_repeat 1 247 0 1 745 1609 141 81 12 chrUextra 21056855 21057199 -7947457 + MDG1_LTR LTR Gypsy 45 412 -30 1 745 446 162 0 0 chrUextra 21057200 21057280 -7947376 + BS2 LINE Jockey 2721 2800 -1921 1 745 4048 2 0 2 chrUextra 21057380 21057848 -7946808 - LSU-rRNA_Dme rRNA rRNA -1646 2254 1788 1 745 1278 0 12 6 chrUextra 21057892 21058052 -7946604 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1628 1 745 5444 16 51 1 chrUextra 21058152 21058824 -7945832 - BATUMI_I LTR Pao -2614 5349 4645 1 745 2114 101 8 63 chrUextra 21058928 21059596 -7945060 - DMSAT6 Satellite Satellite -64 630 1 1 745 5413 30 5 0 chrUextra 21059696 21060367 -7944289 + R1_DM LINE R1 2688 3361 -1995 1 745 1856 166 109 13 chrUextra 21060649 21061140 -7943516 + TART LINE telomeric 8983 9449 -5028 1 745 362 0 19 58 chrUextra 21061240 21061292 -7943364 - NTS_DM Other Other -166 74 25 1 745 1252 18 0 6 chrUextra 21061344 21061509 -7943147 - NTS_DM Other Other -39 201 38 1 745 870 9 0 27 chrUextra 21061509 21061621 -7943035 - NTS_DM Other Other -107 133 25 1 745 1252 18 0 6 chrUextra 21061673 21061838 -7942818 - NTS_DM Other Other -39 201 38 1 745 562 14 0 0 chrUextra 21061838 21061912 -7942744 - NTS_DM Other Other -107 133 60 1 745 5403 21 24 1 chrUextra 21062012 21062684 -7941972 + DOC2_DM LINE Jockey 1838 2524 -2269 1 745 597 0 0 0 chrUextra 21062784 21062854 -7941802 - 5S_DM RNA RNA -65 70 1 1 745 1167 7 0 0 chrUextra 21063078 21063213 -7941443 - 5S_DM RNA RNA 0 135 1 1 745 376 188 0 0 chrUextra 21063567 21063636 -7941020 + HETRP_DM Satellite Satellite 1601 1669 -203 1 745 677 213 0 7 chrUextra 21063803 21063945 -7940711 + HETRP_DM Satellite Satellite 1529 1669 -203 1 745 511 180 0 10 chrUextra 21064122 21064223 -7940433 + HETRP_DM Satellite Satellite 1529 1628 -244 1 745 601 28 0 0 chrUextra 21064328 21064400 -7940256 + R1_DM LINE R1 5285 5356 0 1 745 4182 57 7 5 chrUextra 21064433 21065000 -7939656 + R1_DM LINE R1 1 568 -4788 1 745 322 178 50 101 chrUextra 21065116 21065235 -7939421 + Copia_I LTR Copia 4401 4513 -80 1 745 3244 235 37 19 chrUextra 21065876 21067316 -7937340 + SAR_DM Satellite Satellite 1 1466 -208 1 745 637 66 314 0 chrUextra 21067422 21067543 -7937113 - Gypsy12_I LTR Gypsy -993 4553 4395 1 745 3025 103 4 40 chrUextra 21067561 21068088 -7936568 - Gypsy12_I LTR Gypsy -4944 602 95 1 745 5478 21 5 0 chrUextra 21068188 21068857 -7935799 - R1_DM LINE R1 -856 4500 3829 1 745 4685 5 143 0 chrUextra 21068960 21069632 -7935024 - Gypsy4_I LTR Gypsy -125 6163 5396 1 745 3002 164 11 9 chrUextra 21069747 21070404 -7934252 + SAR_DM Satellite Satellite 326 983 -489 1 745 3553 39 0 0 chrUextra 21070504 21070967 -7933689 + I_DM LINE I 724 1186 -5045 1 745 524 161 390 33 chrUextra 21070963 21071176 -7933480 + ROVER-LTR_DM LTR Gypsy 55 343 -24 1 745 507 256 73 6 chrUextra 21071681 21071846 -7932810 - Gypsy12_I LTR Gypsy -2217 3329 3154 1 745 420 155 0 0 chrUextra 21071877 21071948 -7932708 + DMRT1B LINE R1 3134 3204 -1979 1 745 4997 44 1 5 chrUextra 21072049 21072720 -7931936 + MICROPIA_I LTR Gypsy 1204 1886 -2213 1 745 5699 3 1 3 chrUextra 21072820 21073492 -7931164 + LSU-rRNA_Dme rRNA rRNA 673 1343 -2557 1 745 935 27 26 26 chrUextra 21073592 21073744 -7930912 + NTS_DM Other Other 89 240 0 1 745 1850 4 17 13 chrUextra 21073744 21073983 -7930673 + NTS_DM Other Other 1 240 0 1 745 1817 4 17 17 chrUextra 21073983 21074223 -7930433 + NTS_DM Other Other 1 240 0 1 745 359 0 0 0 chrUextra 21074223 21074264 -7930392 + NTS_DM Other Other 1 41 -199 1 745 5763 3 1 0 chrUextra 21074364 21075036 -7929620 + R1_DM LINE R1 3043 3715 -1641 1 745 1754 177 15 8 chrUextra 21075136 21075528 -7929128 + SAR_DM Satellite Satellite 509 903 -569 1 745 706 32 53 0 chrUextra 21075443 21075538 -7929118 - ARS406_DM Unknown Unknown -164 189 90 1 745 1065 210 0 4 chrUextra 21075543 21075806 -7928850 + SAR_DM Satellite Satellite 496 757 -715 1 745 5766 0 0 1 chrUextra 21075908 21076580 -7928076 - R1_DM LINE R1 -3448 1908 1238 1 745 4220 94 43 16 chrUextra 21076680 21077348 -7927308 + Gypsy12_I LTR Gypsy 1722 2407 -3139 1 745 22 56 0 0 chrUextra 21077458 21077494 -7927162 + AT_rich Low_complexity Low_complexity 1 36 0 1 745 870 9 0 27 chrUextra 21077520 21077632 -7927024 + NTS_DM Other Other 25 133 -107 1 745 1222 18 0 12 chrUextra 21077632 21077798 -7926858 + NTS_DM Other Other 38 201 -39 1 745 870 9 0 27 chrUextra 21077850 21077962 -7926694 + NTS_DM Other Other 25 133 -107 1 745 1186 25 6 6 chrUextra 21077962 21078124 -7926532 + NTS_DM Other Other 38 199 -41 1 745 31 76 0 0 chrUextra 21078225 21078291 -7926365 + AT_rich Low_complexity Low_complexity 1 66 0 1 745 4677 2 0 0 chrUextra 21078364 21078896 -7925760 + SSU-rRNA_Dme rRNA rRNA 1 532 -1463 1 745 5554 14 0 5 chrUextra 21078996 21079668 -7924988 + Gypsy4_I LTR Gypsy 932 1600 -4688 1 745 1077 23 0 0 chrUextra 21079768 21079900 -7924756 + NINJA_I LTR Pao 5344 5475 -536 1 745 4283 28 4 0 chrUextra 21079900 21080440 -7924216 - PROTOP_A DNA P 0 1105 564 1 745 350 167 26 0 chrUextra 21080540 21080618 -7924038 + XDMR Unknown Unknown 282 361 0 1 745 2547 184 12 28 chrUextra 21080562 21081212 -7923444 - SAR_DM Satellite Satellite -352 1120 481 1 745 2898 181 9 6 chrUextra 21081316 21081972 -7922684 - SAR_DM Satellite Satellite -620 852 195 1 745 606 124 0 0 chrUextra 21081879 21081984 -7922672 + ARS406_DM Unknown Unknown 1 105 -248 1 745 2585 179 15 24 chrUextra 21082084 21082743 -7921913 + SAR_DM Satellite Satellite 466 1118 -354 1 745 316 223 0 11 chrUextra 21082658 21082753 -7921903 - XDMR_DM Unknown Unknown 0 360 267 1 745 5696 1 0 0 chrUextra 21082856 21083528 -7921128 - ROO_I LTR Pao -6012 2244 1573 1 745 2678 192 24 8 chrUextra 21083628 21084298 -7920358 - SAR_DM Satellite Satellite -587 885 205 1 745 5698 1 0 0 chrUextra 21084402 21085053 -7919603 - LSU-rRNA_Dme rRNA rRNA -610 3290 2640 1 745 2764 179 9 17 chrUextra 21085189 21085844 -7918812 - SAR_DM Satellite Satellite -389 1083 434 1 745 2236 11 0 0 chrUextra 21085944 21086205 -7918451 - MAX_LTR LTR Pao -60 261 1 1 745 3433 7 0 0 chrUextra 21086205 21086616 -7918040 - MAX_I LTR Pao 0 7914 7504 1 745 34 24 0 0 chrUextra 21086874 21086915 -7917741 + AT_rich Low_complexity Low_complexity 1 41 0 1 745 21 95 0 0 chrUextra 21087127 21087190 -7917466 + AT_rich Low_complexity Low_complexity 1 63 0 1 745 1589 0 5 0 chrUextra 21087202 21087388 -7917268 + LSU-rRNA_Dme rRNA rRNA 1 187 -3713 1 745 5496 17 0 0 chrUextra 21087513 21088160 -7916496 + Invader1_I LTR Gypsy 1 647 -2539 1 745 5616 15 9 0 chrUextra 21088260 21088932 -7915724 - R1_DM LINE R1 -3070 2286 1609 1 745 2990 162 12 15 chrUextra 21089041 21089704 -7914952 + SAR_DM Satellite Satellite 353 1013 -459 1 745 5604 16 0 0 chrUextra 21089804 21090476 -7914180 + R1_DM LINE R1 132 803 -4553 1 745 4222 25 0 2 chrUextra 21091348 21091868 -7912788 + DMCR1A LINE CR1 2324 2842 -1628 1 745 1279 44 0 0 chrUextra 21091862 21092020 -7912636 + DMCR1A LINE CR1 3484 3641 -829 1 745 2861 202 12 18 chrUextra 21092892 21093564 -7911092 + SAR_DM Satellite Satellite 1 668 -216 1 745 5201 32 0 13 chrUextra 21093664 21094336 -7910320 - FW_DM LINE Jockey -2929 1763 1101 1 745 200 259 0 18 chrUextra 21094462 21094517 -7910139 + (CCCCAA)n Simple_repeat Simple_repeat 1 54 0 1 745 2490 117 20 18 chrUextra 21095208 21095852 -7908804 - DMSAT6 Satellite Satellite -34 644 1 1 745 185 108 27 0 chrUextra 21097340 21097377 -7907279 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 745 621 249 6 17 chrUextra 21097531 21097711 -7906945 + TAHRE LINE telomeric 9871 10048 -415 1 745 520 130 62 14 chrUextra 21097737 21097880 -7906776 + TAHRE LINE telomeric 10370 10489 -3988 1 745 1782 53 0 75 chrUextra 21097929 21098196 -7906460 + PROTOP DNA P 1 247 -4233 1 745 4188 75 112 6 chrUextra 21098299 21098953 -7905703 - BATUMI_I LTR Pao -6278 1685 963 1 745 2815 3 3 0 chrUextra 21099415 21099740 -7904916 - SSU-rRNA_Dme rRNA rRNA 0 1995 1670 1 745 2994 170 37 9 chrUextra 21099840 21100512 -7904144 - SAR_DM Satellite Satellite -445 1027 337 1 745 3499 189 0 0 chrUextra 21100612 21101279 -7903377 - ROVER-I_DM LTR Gypsy -3312 3272 2606 1 745 185 0 40 0 chrUextra 21101657 21101682 -7902974 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 1 745 230 234 0 0 chrUextra 21101865 21101929 -7902727 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 1 745 23 68 0 0 chrUextra 21102436 21102480 -7902176 + AT_rich Low_complexity Low_complexity 1 44 0 1 745 26 30 0 0 chrUextra 21102526 21102559 -7902097 + AT_rich Low_complexity Low_complexity 1 33 0 1 746 2696 174 32 14 chrUextra 21102937 21103596 -7901060 + SAR_DM Satellite Satellite 192 862 -610 1 746 1867 259 21 37 chrUextra 21103717 21104371 -7900285 + ROVER-I_DM LTR Gypsy 1592 2235 -4349 1 746 643 13 0 0 chrUextra 21105067 21105144 -7899512 + PROTOP DNA P 182 258 -4222 1 746 5358 36 1 5 chrUextra 21105244 21105916 -7898740 + MAX_I LTR Pao 2199 2868 -5046 1 746 262 106 0 21 chrUextra 21106450 21106498 -7898158 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 746 325 81 48 16 chrUextra 21106520 21106583 -7898073 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 746 522 162 0 9 chrUextra 21106582 21106688 -7897968 - DMLTR5 LTR Gypsy 0 266 162 1 746 5516 5 3 0 chrUextra 21106788 21107460 -7897196 + STALKER4_I LTR Gypsy 5596 6269 -261 1 746 21 89 0 0 chrUextra 21107932 21107988 -7896668 + AT_rich Low_complexity Low_complexity 1 56 0 1 746 1986 0 0 0 chrUextra 21108007 21108232 -7896424 - SSU-rRNA_Dme rRNA rRNA 0 1995 1771 1 746 1003 298 72 36 chrUextra 21109113 21109720 -7894936 - Gypsy2_I LTR Gypsy -910 5225 4597 1 746 22 0 0 0 chrUextra 21109734 21109756 -7894900 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 2690 179 38 17 chrUextra 21109874 21110538 -7894118 + SAR_DM Satellite Satellite 260 937 -535 1 746 5711 9 0 1 chrUextra 21110645 21111316 -7893340 - R1_DM LINE R1 -549 4807 4138 1 746 5640 1 1 1 chrUextra 21111416 21112087 -7892569 + ROO_I LTR Pao 6602 7272 -984 1 746 5609 18 0 0 chrUextra 21112187 21112858 -7891798 - R1_DM LINE R1 -838 4518 3848 1 746 2863 164 48 9 chrUextra 21112958 21113629 -7891027 - SAR_DM Satellite Satellite -430 1042 346 1 746 2708 181 46 9 chrUextra 21113729 21114399 -7890257 - SAR_DM Satellite Satellite -549 923 229 1 746 2883 169 24 15 chrUextra 21115272 21115938 -7888718 - SAR_DM Satellite Satellite -577 895 224 1 746 999 188 53 8 chrUextra 21116130 21116634 -7888022 + SAR_DM Satellite Satellite 1 526 -680 1 746 423 132 12 0 chrUextra 21116630 21116713 -7887943 - ARS406_DM Unknown Unknown -235 118 35 1 746 5514 6 1 3 chrUextra 21117584 21118255 -7886401 - R1_DM LINE R1 -4067 1289 620 1 746 3854 16 8 48 chrUextra 21118355 21118874 -7885782 + DM176_LTR LTR Gypsy 10 507 0 1 746 1258 13 7 0 chrUextra 21118874 21119026 -7885630 + DM176_I LTR Gypsy 1 153 -6267 1 746 551 0 130 5 chrUextra 21119130 21119347 -7885309 + (TA)n Simple_repeat Simple_repeat 1 244 0 1 746 3864 2 0 0 chrUextra 21119352 21119797 -7884859 + NOMAD_LTR LTR Gypsy 1 445 -73 1 746 5151 21 0 28 chrUextra 21119897 21120568 -7884088 + CIRCE LINE Composite 4062 4713 -1643 1 746 6032 311 70 61 chrUextra 21120668 21123382 -7881274 + R1_DM LINE R1 2620 5356 0 1 746 1633 72 8 0 chrUextra 21123415 21123652 -7881004 + R1_DM LINE R1 1 239 -5117 1 746 5177 42 0 6 chrUextra 21123752 21124423 -7880233 + STALKER4_I LTR Gypsy 4345 5011 -1519 1 746 813 26 8 73 chrUextra 21124523 21124647 -7880009 + ROVER-LTR_DM LTR Gypsy 252 367 0 1 746 2939 0 2 149 chrUextra 21124647 21125136 -7879520 + ROVER-I_DM LTR Gypsy 1 417 -6167 1 746 445 17 0 0 chrUextra 21125136 21125194 -7879462 + ROVER-I_DM LTR Gypsy 718 775 -5809 1 746 1971 190 64 12 chrUextra 21125294 21125765 -7878891 - SAR_DM Satellite Satellite -667 706 22 1 746 1235 86 0 0 chrUextra 21125765 21125952 -7878704 + ARS406_DM Unknown Unknown 1 187 -166 1 746 1971 190 64 12 chrUextra 21125952 21125965 -7878691 - SAR_DM Satellite Satellite -667 21 1 1 746 2794 171 15 11 chrUextra 21126077 21126735 -7877921 + SAR_DM Satellite Satellite 326 986 -486 1 746 5723 13 0 0 chrUextra 21126836 21127507 -7877149 - BATUMI_I LTR Pao -2248 5715 5045 1 746 5822 0 3 1 chrUextra 21127607 21128278 -7876378 + LSU-rRNA_Dme rRNA rRNA 3163 3834 -66 1 746 579 53 0 0 chrUextra 21129149 21129224 -7875432 - DMCR1A LINE CR1 -2483 1987 1913 1 746 495 355 54 7 chrUextra 21129314 21129743 -7874913 + Gypsy12_I LTR Gypsy 2959 3407 -2139 1 746 2144 155 12 3 chrUextra 21129921 21130585 -7874071 - SAR_DM Satellite Satellite -645 670 1 1 746 4482 3 0 0 chrUextra 21130691 21131265 -7873391 + QUASIMODO_I LTR Gypsy 5487 6060 0 1 746 787 0 0 0 chrUextra 21131265 21131362 -7873294 + QUASIMODO_LTR LTR Gypsy 1 97 -561 1 746 4000 95 3 0 chrUextra 21131523 21132131 -7872525 - S_DM DNA Tc1 0 1736 1127 1 746 4480 4 0 0 chrUextra 21132233 21132757 -7871899 + G2_DM LINE Jockey 2579 3102 0 1 746 1083 42 28 0 chrUextra 21132760 21132904 -7871752 - R2_DM LINE R2 -1591 2016 1869 1 746 1492 11 0 0 chrUextra 21133004 21133180 -7871476 - HOBO DNA hAT -2840 176 1 1 746 626 0 0 0 chrUextra 21133775 21133846 -7870810 + LSU-rRNA_Dme rRNA rRNA 2562 2632 -1268 1 746 5043 15 2 0 chrUextra 21133846 21134446 -7870210 + R1_DM LINE R1 1 601 -4755 1 746 602 125 0 0 chrUextra 21134546 21134650 -7870006 - ARS406_DM Unknown Unknown -249 104 1 1 746 2863 177 11 8 chrUextra 21134557 21135213 -7869443 + SAR_DM Satellite Satellite 195 852 -620 1 746 5655 18 1 1 chrUextra 21135317 21135988 -7868668 + DIVER_I LTR Pao 4657 5327 -316 1 746 5685 1 1 5 chrUextra 21136088 21136759 -7867897 - LSU-rRNA_Dme rRNA rRNA -2549 1351 683 1 746 2022 0 0 0 chrUextra 21136859 21137090 -7867566 + R1_DM LINE R1 5126 5356 0 1 746 3829 2 0 0 chrUextra 21137088 21137530 -7867126 + LSU-rRNA_Dme rRNA rRNA 2640 3081 -819 1 746 4246 6 2 4 chrUextra 21137630 21138142 -7866514 - ACCORD_I LTR Gypsy -5777 511 1 1 746 1333 13 0 0 chrUextra 21138142 21138301 -7866355 - ACCORD_LTR LTR Gypsy 0 558 400 1 746 2266 159 25 9 chrUextra 21138401 21138452 -7866204 + SAR_DM Satellite Satellite 1 67 -1114 1 746 1009 88 0 6 chrUextra 21138452 21138612 -7866044 - ARS406_DM Unknown Unknown -164 189 31 1 746 2266 159 25 9 chrUextra 21138612 21139072 -7865584 + SAR_DM Satellite Satellite 68 681 -500 1 746 790 11 0 0 chrUextra 21139172 21139266 -7865390 + QUASIMODO_I LTR Gypsy 5967 6060 0 1 746 4966 2 0 0 chrUextra 21139266 21139843 -7864813 + QUASIMODO_LTR LTR Gypsy 1 577 -81 1 746 22 35 0 0 chrUextra 21140294 21140323 -7864333 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 241 35 0 0 chrUextra 21140731 21140760 -7863896 + Baggins1 LINE LOA 4728 4756 -697 1 746 693 103 241 0 chrUextra 21140768 21140913 -7863743 + FB4_DM DNA Tc1 3908 4087 -2 1 746 5716 13 0 0 chrUextra 21142256 21142927 -7861729 - Gypsy4_I LTR Gypsy -2936 3352 2682 1 746 5392 27 25 0 chrUextra 21143027 21143698 -7860958 - R1_DM LINE R1 -3320 2036 1349 1 746 244 128 0 21 chrUextra 21144041 21144089 -7860567 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 746 327 66 65 16 chrUextra 21144404 21144466 -7860190 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 746 262 106 0 21 chrUextra 21144855 21144903 -7859753 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 746 351 49 65 16 chrUextra 21144925 21144987 -7859669 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 746 697 193 0 7 chrUextra 21144986 21145132 -7859524 - DMLTR5 LTR Gypsy 0 266 122 1 746 2866 181 11 16 chrUextra 21145340 21146011 -7858645 - SAR_DM Satellite Satellite -1090 667 1 1 746 5667 1 0 0 chrUextra 21146111 21146782 -7857874 - LSU-rRNA_Dme rRNA rRNA -2876 1024 354 1 746 2909 20 14 0 chrUextra 21146882 21147230 -7857426 + BS2 LINE Jockey 3264 3616 -1105 1 746 1292 212 17 10 chrUextra 21147262 21147553 -7857103 + Gypsy_I LTR Gypsy 452 744 -5763 1 746 2715 191 16 20 chrUextra 21147658 21148323 -7856333 + SAR_DM Satellite Satellite 1 661 -208 1 746 4023 16 0 14 chrUextra 21148424 21148943 -7855713 - STALKER4_I LTR Gypsy -4955 1575 1064 1 746 2944 17 0 30 chrUextra 21149195 21149563 -7855093 + CIRCE LINE Composite 1526 1882 -4474 1 746 463 303 45 42 chrUextra 21149572 21149858 -7854798 + Gypsy12_I LTR Gypsy 3835 4121 -1425 1 746 1776 18 4 26 chrUextra 21149639 21149866 -7854790 + CIRCE LINE Composite 1888 2109 -4247 1 746 5867 1 0 1 chrUextra 21149966 21150637 -7854019 + SSU-rRNA_Dme rRNA rRNA 4 673 -1322 1 746 2833 171 12 12 chrUextra 21150742 21151406 -7853250 + SAR_DM Satellite Satellite 295 958 -514 1 746 3019 171 9 8 chrUextra 21151508 21152175 -7852481 + SAR_DM Satellite Satellite 212 879 -593 1 746 495 0 17 0 chrUextra 21152279 21152339 -7852317 - FW_DM LINE Jockey -2373 2319 2259 1 746 5212 14 18 0 chrUextra 21152327 21152950 -7851706 - Gypsy4_I LTR Gypsy -2600 3688 3055 1 746 2455 3 7 0 chrUextra 21153050 21153339 -7851317 - R1_DM LINE R1 -5065 291 1 1 746 3324 3 0 0 chrUextra 21153339 21153721 -7850935 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2251 1 746 2304 48 0 0 chrUextra 21153821 21154114 -7850542 - R1_DM LINE R1 -3736 1620 1328 1 746 2669 32 3 11 chrUextra 21154111 21154462 -7850194 - R1_DM LINE R1 -4179 1177 830 1 746 324 44 0 0 chrUextra 21154447 21154492 -7850164 - R1_DM LINE R1 -4744 612 568 1 746 4188 4 0 2 chrUextra 21154592 21155092 -7849564 + DOC LINE Jockey 4224 4722 -3 1 746 401 184 0 127 chrUextra 21155143 21155261 -7849395 + ROVER-I_DM LTR Gypsy 1689 1791 -4793 1 746 2181 204 44 11 chrUextra 21155364 21156034 -7848622 + SAR_DM Satellite Satellite 1 692 -205 1 746 4780 44 46 15 chrUextra 21156134 21156805 -7847851 + DMCR1A LINE CR1 2229 2920 -1550 1 746 831 0 10 0 chrUextra 21156905 21157004 -7847652 - LSU-rRNA_Dme rRNA rRNA -3800 100 1 1 746 21 95 0 0 chrUextra 21157016 21157079 -7847577 + AT_rich Low_complexity Low_complexity 1 63 0 1 746 34 24 0 0 chrUextra 21157293 21157334 -7847322 + AT_rich Low_complexity Low_complexity 1 41 0 1 746 243 302 68 68 chrUextra 21157683 21158077 -7846579 + BLASTOPIA_I LTR Gypsy 2203 2596 -1885 1 746 334 307 7 7 chrUextra 21158090 21158231 -7846425 + Invader3_I LTR Gypsy 2889 3029 -1859 1 746 5346 30 27 0 chrUextra 21159220 21159889 -7844767 - R1_DM LINE R1 -1853 3503 2817 1 746 1354 27 97 16 chrUextra 21159989 21160175 -7844481 - PROTOP_B DNA P -952 201 1 1 746 3177 0 0 3 chrUextra 21160766 21161131 -7843525 - LSU-rRNA_Dme rRNA rRNA -1749 2151 1788 1 746 2086 0 8 4 chrUextra 21161175 21161431 -7843225 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1532 1 746 5567 22 1 0 chrUextra 21161531 21162202 -7842454 + DMCR1A LINE CR1 2333 3004 -1466 1 746 710 308 45 40 chrUextra 21162335 21162970 -7841686 + BLOOD_I LTR Gypsy 2021 2664 -3932 1 746 255 125 0 0 chrUextra 21163086 21163126 -7841530 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 746 22 56 0 0 chrUextra 21163139 21163175 -7841481 + AT_rich Low_complexity Low_complexity 1 36 0 1 746 857 18 0 27 chrUextra 21163201 21163313 -7841343 + NTS_DM Other Other 25 133 -107 1 746 1252 18 0 6 chrUextra 21163313 21163478 -7841178 + NTS_DM Other Other 38 201 -39 1 746 870 9 0 27 chrUextra 21163530 21163642 -7841014 + NTS_DM Other Other 25 133 -107 1 746 813 20 0 0 chrUextra 21163642 21163744 -7840912 + NTS_DM Other Other 38 139 -101 1 746 1316 6 22 16 chrUextra 21163844 21164027 -7840629 + NTS_DM Other Other 57 240 0 1 746 1847 4 17 13 chrUextra 21164027 21164266 -7840390 + NTS_DM Other Other 1 240 0 1 746 1301 6 0 18 chrUextra 21164266 21164431 -7840225 + NTS_DM Other Other 1 162 -78 1 746 5688 13 0 0 chrUextra 21164615 21165286 -7839370 + DMRT1B LINE R1 1773 2443 -2740 1 746 1725 4 17 17 chrUextra 21165386 21165616 -7839040 + NTS_DM Other Other 11 240 0 1 746 1265 6 0 30 chrUextra 21165616 21165783 -7838873 + NTS_DM Other Other 1 162 -78 1 746 488 119 36 0 chrUextra 21165894 21165978 -7838678 + NTS_DM Other Other 4 90 -150 1 746 229 291 23 16 chrUextra 21166237 21166366 -7838290 - HMSBEAGLE_I LTR Gypsy -6176 353 224 1 746 3571 5 0 0 chrUextra 21167699 21168115 -7836541 - LSU-rRNA_Dme rRNA rRNA -845 3055 2640 1 746 2204 4 0 4 chrUextra 21168113 21168370 -7836286 - R1_DM LINE R1 0 5356 5101 1 746 459 100 0 0 chrUextra 21168470 21168540 -7836116 - DM297_I LTR Gypsy -5308 859 790 1 746 1215 90 53 0 chrUextra 21168538 21168727 -7835929 + DM297_I LTR Gypsy 590 788 -5379 1 746 488 61 60 12 chrUextra 21168715 21168798 -7835858 - DM297_I LTR Gypsy -6080 87 1 1 746 589 109 286 5 chrUextra 21168798 21168976 -7835680 - DM297_LTR LTR Gypsy 0 414 187 1 746 585 13 13 0 chrUextra 21169241 21169319 -7835337 + NTS_DM Other Other 55 133 -107 1 746 1252 18 0 6 chrUextra 21169319 21169484 -7835172 + NTS_DM Other Other 38 201 -39 1 746 870 9 0 27 chrUextra 21169536 21169648 -7835008 + NTS_DM Other Other 25 133 -107 1 746 1438 15 20 20 chrUextra 21169648 21169851 -7834805 + NTS_DM Other Other 38 240 0 1 746 521 16 0 0 chrUextra 21169851 21169912 -7834744 + NTS_DM Other Other 1 61 -179 1 746 337 319 28 38 chrUextra 21170351 21170666 -7833990 - Gypsy3_I LTR Gypsy -5228 1784 1218 1 746 5789 0 0 0 chrUextra 21170783 21171454 -7833202 - G2_DM LINE Jockey -1835 1267 597 1 746 5678 0 0 1 chrUextra 21171554 21172225 -7832431 + LSU-rRNA_Dme rRNA rRNA 446 1115 -2785 1 746 2683 188 18 26 chrUextra 21172325 21172996 -7831660 + SAR_DM Satellite Satellite 1 665 -214 1 746 614 200 7 14 chrUextra 21173111 21173253 -7831403 + HETRP_DM Satellite Satellite 1529 1669 -203 1 746 655 186 7 14 chrUextra 21173388 21173530 -7831126 + HETRP_DM Satellite Satellite 1529 1669 -203 1 746 464 188 0 10 chrUextra 21173670 21173767 -7830889 + HETRP_DM Satellite Satellite 1529 1624 -248 1 746 5601 3 0 1 chrUextra 21173867 21174538 -7830118 + DM176_I LTR Gypsy 4675 5344 -1076 1 746 391 147 0 13 chrUextra 21174643 21174719 -7829937 - Gypsy_I LTR Gypsy -6232 275 201 1 746 231 36 0 0 chrUextra 21174723 21174751 -7829905 + (T)n Simple_repeat Simple_repeat 1 28 0 1 746 3932 66 7 0 chrUextra 21174763 21175309 -7829347 - BS2 LINE Jockey 0 4721 4172 1 746 676 255 21 54 chrUextra 21175418 21175659 -7828997 + Invader1_I LTR Gypsy 2356 2751 -583 1 746 2282 31 90 2 chrUextra 21176180 21176724 -7827932 + IDEFIX_I LTR Gypsy 5037 5628 0 1 746 963 16 0 8 chrUextra 21176724 21176851 -7827805 + IDEFIX_LTR LTR Gypsy 1 126 -468 1 746 5722 0 1 6 chrUextra 21176951 21177622 -7827034 + SSU-rRNA_Dme rRNA rRNA 998 1665 -330 1 746 1451 18 0 0 chrUextra 21177723 21177894 -7826762 + R1_DM LINE R1 5186 5356 0 1 746 3215 84 9 4 chrUextra 21177927 21178393 -7826263 + R1_DM LINE R1 1 468 -4888 1 746 2873 178 9 9 chrUextra 21178496 21179164 -7825492 - SAR_DM Satellite Satellite -593 879 212 1 746 2345 208 9 21 chrUextra 21179264 21179926 -7824730 + SAR_DM Satellite Satellite 467 1120 -352 1 746 318 169 0 0 chrUextra 21179870 21179935 -7824721 - XDMR Unknown Unknown 0 361 297 1 746 870 9 0 27 chrUextra 21180063 21180175 -7824481 + NTS_DM Other Other 25 133 -107 1 746 1252 18 0 6 chrUextra 21180175 21180340 -7824316 + NTS_DM Other Other 38 201 -39 1 746 870 9 0 27 chrUextra 21180392 21180504 -7824152 + NTS_DM Other Other 25 133 -107 1 746 1256 18 0 6 chrUextra 21180504 21180669 -7823987 + NTS_DM Other Other 38 201 -39 1 746 2852 65 50 2 chrUextra 21181060 21181477 -7823179 - PROTOP_A DNA P 0 1105 669 1 746 5342 0 2 2 chrUextra 21181577 21182190 -7822466 + LSU-rRNA_Dme rRNA rRNA 3288 3900 0 1 746 5818 0 3 1 chrUextra 21182348 21183019 -7821637 - LSU-rRNA_Dme rRNA rRNA -168 3732 3061 1 746 58 15 0 0 chrUextra 21183165 21183230 -7821426 + AT_rich Low_complexity Low_complexity 1 65 0 1 746 62 26 0 0 chrUextra 21183714 21183790 -7820866 + AT_rich Low_complexity Low_complexity 1 76 0 1 746 5574 18 1 0 chrUextra 21183890 21184561 -7820095 + FW_DM LINE Jockey 395 1066 -3626 1 746 2714 168 21 13 chrUextra 21184662 21185290 -7819366 - SAR_DM Satellite Satellite -645 827 195 1 746 852 89 0 7 chrUextra 21185196 21185332 -7819324 + ARS406_DM Unknown Unknown 1 135 -218 1 746 1025 50 0 0 chrUextra 21185432 21185571 -7819085 + ARS406_DM Unknown Unknown 51 189 -164 1 746 2873 176 9 9 chrUextra 21185448 21186103 -7818553 - SAR_DM Satellite Satellite -535 937 283 1 746 4737 92 1 1 chrUextra 21186203 21186874 -7817782 + Gypsy12_I LTR Gypsy 3982 4652 -894 1 746 3065 167 8 14 chrUextra 21186974 21187641 -7817015 + SAR_DM Satellite Satellite 385 1047 -425 1 746 5615 12 0 0 chrUextra 21187745 21188416 -7816240 - ROO_I LTR Pao -3619 4637 3967 1 746 3854 0 5 0 chrUextra 21188516 21188963 -7815693 - R1_DM LINE R1 -4907 449 1 1 746 229 88 0 0 chrUextra 21188963 21188997 -7815659 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 1 746 1720 5 0 0 chrUextra 21188991 21189187 -7815469 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2459 1 746 5774 5 0 0 chrUextra 21189287 21189958 -7814698 - R1_DM LINE R1 -221 5135 4465 1 746 782 0 0 0 chrUextra 21190058 21190147 -7814509 - NTS_DM Other Other -151 89 1 1 746 1850 4 17 13 chrUextra 21190147 21190386 -7814270 - NTS_DM Other Other 0 240 1 1 746 1698 21 21 17 chrUextra 21190386 21190625 -7814031 - NTS_DM Other Other 0 240 1 1 746 619 20 39 39 chrUextra 21190625 21190729 -7813927 - NTS_DM Other Other 0 240 137 1 746 3065 171 9 8 chrUextra 21190830 21191500 -7813156 - SAR_DM Satellite Satellite -535 937 267 1 746 1762 155 93 45 chrUextra 21191603 21192271 -7812385 + Stalker2_I LTR Gypsy 337 1110 -5420 1 746 849 132 0 0 chrUextra 21192551 21192718 -7811938 + (ACATG)n Simple_repeat Simple_repeat 3 169 0 1 746 5704 0 1 0 chrUextra 21193142 21193813 -7810843 - ROO_I LTR Pao -2730 5526 4855 1 746 1318 6 0 0 chrUextra 21193913 21194069 -7810587 - MICROPIA_LTR LTR Gypsy -320 156 1 1 746 4263 12 0 2 chrUextra 21194069 21194584 -7810072 - MICROPIA_I LTR Gypsy 0 4476 3963 1 746 2702 156 33 45 chrUextra 21194684 21195355 -7809301 + SAR_DM Satellite Satellite 200 862 -610 1 746 5506 10 0 1 chrUextra 21195455 21196126 -7808530 + STALKER4_I LTR Gypsy 5031 5700 -830 1 746 571 148 40 16 chrUextra 21196239 21196363 -7808293 - DMTOM1_LTR LTR Gypsy 0 410 284 1 746 254 190 17 0 chrUextra 21196380 21196438 -7808218 - DM176_LTR LTR Gypsy -141 366 308 1 746 248 133 22 0 chrUextra 21196557 21196602 -7808054 - DM176_LTR LTR Gypsy -238 269 224 1 746 2972 176 6 6 chrUextra 21196997 21197659 -7806997 - SAR_DM Satellite Satellite -594 878 217 1 746 1547 30 76 0 chrUextra 21197769 21197966 -7806690 - PROTOP_B DNA P -941 212 1 1 746 2781 182 9 19 chrUextra 21198539 21199210 -7805446 + SAR_DM Satellite Satellite 440 1103 -369 1 746 37 23 0 0 chrUextra 21199672 21199716 -7804940 + AT_rich Low_complexity Low_complexity 1 44 0 1 746 843 88 7 7 chrUextra 21199844 21199981 -7804675 - DNAREP1_DM LINE Penelope -450 144 8 1 746 4558 19 86 1 chrUextra 21200081 21200752 -7803904 - R1_DM LINE R1 -1202 4154 3427 1 746 1485 66 10 0 chrUextra 21200852 21201049 -7803607 + STALKER4_LTR LTR Gypsy 181 379 -23 1 746 31 58 0 0 chrUextra 21201187 21201239 -7803417 + AT_rich Low_complexity Low_complexity 1 52 0 1 746 1275 205 0 0 chrUextra 21201240 21201523 -7803133 + STALKER4_I LTR Gypsy 235 517 -6013 1 746 5419 13 0 0 chrUextra 21201623 21202294 -7802362 + Invader2_I LTR Gypsy 3737 4407 -185 1 746 1778 5 0 0 chrUextra 21202394 21202603 -7802053 + QUASIMODO_LTR LTR Gypsy 450 658 0 1 746 3759 9 0 19 chrUextra 21202603 21203065 -7801591 + QUASIMODO_I LTR Gypsy 1 453 -5607 1 746 5107 54 1 5 chrUextra 21203165 21203836 -7800820 + BATUMI_I LTR Pao 3522 4190 -3773 1 746 2356 99 26 15 chrUextra 21203940 21204600 -7800056 - DMSAT6 Satellite Satellite -25 666 1 1 746 3032 108 81 99 chrUextra 21204708 21205376 -7799280 - TART LINE telomeric -6837 7640 6985 1 746 2832 182 14 11 chrUextra 21205481 21206135 -7798521 + SAR_DM Satellite Satellite 282 937 -535 1 746 778 118 7 0 chrUextra 21206013 21206149 -7798507 - ARS406_DM Unknown Unknown -164 189 53 1 746 5201 29 3 8 chrUextra 21206249 21206909 -7797747 - BATUMI_I LTR Pao -5912 2051 1395 1 746 4905 22 6 49 chrUextra 21207020 21207690 -7796966 + BATUMI_I LTR Pao 2092 2732 -5231 1 746 1601 266 19 19 chrUextra 21207793 21208379 -7796277 + FROGGER_I LTR Copia 1406 1991 -86 1 746 2337 157 21 21 chrUextra 21208562 21209233 -7795423 + DMSAT6 Satellite Satellite 1 671 -97 1 746 4746 16 113 1 chrUextra 21209333 21210004 -7794652 - DOC LINE Jockey -2058 2667 1922 1 746 582 0 0 0 chrUextra 21210104 21210175 -7794481 + R2_DM LINE R2 3537 3607 0 1 746 5186 5 2 2 chrUextra 21210171 21210775 -7793881 + LSU-rRNA_Dme rRNA rRNA 2578 3181 -719 1 746 711 0 0 0 chrUextra 21210875 21210954 -7793702 + (TTCTC)n Simple_repeat Simple_repeat 2 80 0 1 746 2206 100 8 57 chrUextra 21211646 21212317 -7792339 - DMSAT6 Satellite Satellite -50 637 1 1 746 2722 188 15 8 chrUextra 21212417 21213071 -7791585 + SAR_DM Satellite Satellite 418 1076 -396 1 746 3086 156 92 6 chrUextra 21213188 21213859 -7790797 + IDEFIX_I LTR Gypsy 2986 3714 -1914 1 746 2528 156 11 11 chrUextra 21213962 21214628 -7790028 - SAR_DM Satellite Satellite -635 666 1 1 746 5682 1 1 0 chrUextra 21214730 21215401 -7789255 + DOC LINE Jockey 1532 2203 -2522 1 746 488 119 36 0 chrUextra 21215510 21215594 -7789062 + NTS_DM Other Other 4 90 -150 1 746 28 48 0 0 chrUextra 21215867 21215909 -7788747 + AT_rich Low_complexity Low_complexity 1 42 0 1 746 212 0 36 0 chrUextra 21216144 21216172 -7788484 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 746 5620 9 0 0 chrUextra 21216272 21216943 -7787713 + STALKER4_I LTR Gypsy 2126 2796 -3734 1 746 588 14 0 0 chrUextra 21217043 21217114 -7787542 + ARS406_DM Unknown Unknown 119 189 -164 1 746 2147 202 70 26 chrUextra 21217051 21217713 -7786943 - SAR_DM Satellite Satellite -242 1230 540 1 746 756 0 0 0 chrUextra 21217814 21217903 -7786753 - R1_DM LINE R1 -347 5009 4921 1 746 3766 0 0 0 chrUextra 21217903 21218331 -7786325 - ROO_LTR LTR Pao 0 428 1 1 746 1262 0 7 0 chrUextra 21218331 21218485 -7786171 - ROO_I LTR Pao 0 8256 8102 1 746 5187 19 0 8 chrUextra 21218585 21219256 -7785400 + IDEFIX_I LTR Gypsy 2906 3571 -2057 1 746 3152 27 10 7 chrUextra 21219360 21219773 -7784883 - BATUMI_I LTR Pao -1123 6840 6427 1 746 1737 30 0 4 chrUextra 21219796 21220027 -7784629 + BATUMI_I LTR Pao 7303 7532 -431 1 746 805 52 0 17 chrUextra 21221452 21221569 -7783087 + (GAGAA)n Simple_repeat Simple_repeat 4 118 0 1 746 1815 4 17 13 chrUextra 21221669 21221905 -7782751 + NTS_DM Other Other 4 240 0 1 746 1301 6 0 18 chrUextra 21221905 21222070 -7782586 + NTS_DM Other Other 1 162 -78 1 746 488 119 36 0 chrUextra 21222180 21222264 -7782392 + NTS_DM Other Other 4 90 -150 1 746 5519 9 6 0 chrUextra 21222440 21223111 -7781545 - STALKER4_I LTR Gypsy -3634 2896 2222 1 746 1579 196 45 3 chrUextra 21223211 21223861 -7780795 - SAR_DM Satellite Satellite -723 677 1 1 746 697 193 0 7 chrUextra 21224198 21224344 -7780312 + DMLTR5 LTR Gypsy 122 266 0 1 746 351 49 65 16 chrUextra 21224343 21224405 -7780251 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 746 262 106 0 21 chrUextra 21224427 21224475 -7780181 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 746 4465 109 15 1 chrUextra 21224753 21225424 -7779232 - Gypsy_I LTR Gypsy -267 6240 5561 1 746 5733 5 0 0 chrUextra 21225524 21226195 -7778461 - R1_DM LINE R1 -1878 3478 2808 1 746 2624 179 12 23 chrUextra 21226295 21226957 -7777699 + SAR_DM Satellite Satellite 465 1119 -353 1 746 270 188 16 0 chrUextra 21226902 21226966 -7777690 - XDMR Unknown Unknown 0 361 297 1 746 682 305 47 45 chrUextra 21227066 21227732 -7776924 + SAR_DM Satellite Satellite 242 908 -564 1 746 34 24 0 0 chrUextra 21227985 21228026 -7776630 + AT_rich Low_complexity Low_complexity 1 41 0 1 746 2902 165 17 9 chrUextra 21228630 21229277 -7775379 - SAR_DM Satellite Satellite -396 1076 425 1 746 31 58 0 0 chrUextra 21229522 21229574 -7775082 + AT_rich Low_complexity Low_complexity 1 52 0 1 746 1371 159 116 8 chrUextra 21229575 21230050 -7774606 + STALKER4_I LTR Gypsy 235 871 -5659 1 746 4426 54 118 5 chrUextra 21230150 21230821 -7773835 - TRANSIB2 DNA Transib -1506 1338 592 1 746 2874 176 11 11 chrUextra 21230921 21231587 -7773069 + SAR_DM Satellite Satellite 293 958 -514 1 746 5440 19 0 0 chrUextra 21231692 21232363 -7772293 - STALKER4_I LTR Gypsy -3411 3119 2449 1 746 5656 0 5 0 chrUextra 21232463 21233134 -7771522 - ROO_I LTR Pao -4952 3304 2631 1 93 2863 171 27 14 chrUextra 21233243 21233905 -7770751 - SAR_DM Satellite Satellite -418 1054 384 1 747 1722 269 27 27 chrUextra 21234007 21234676 -7769980 + ROVER-I_DM LTR Gypsy 1245 1913 -4671 1 747 5417 33 0 3 chrUextra 21234776 21235447 -7769209 + R1_DM LINE R1 1318 1986 -3370 1 747 5840 3 0 0 chrUextra 21235547 21236218 -7768438 - DIVER_I LTR Pao -3732 1911 1241 1 747 5276 24 0 15 chrUextra 21236318 21236989 -7767667 + FW_DM LINE Jockey 1396 2056 -2636 1 747 4543 17 0 2 chrUextra 21237089 21237630 -7767026 + R2_DM LINE R2 3065 3604 -3 1 747 433 55 0 0 chrUextra 21237626 21237681 -7766975 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 747 509 59 0 0 chrUextra 21237681 21237749 -7766907 + R1_DM LINE R1 1 68 -5288 1 747 2483 41 3 0 chrUextra 21237862 21238178 -7766478 + PROTOP DNA P 4164 4480 0 1 747 520 158 43 17 chrUextra 21238633 21238749 -7765907 + SAR_DM Satellite Satellite 785 903 -569 1 747 644 63 53 0 chrUextra 21238664 21238759 -7765897 - ARS406_DM Unknown Unknown -164 189 90 1 747 2381 182 7 7 chrUextra 21238764 21239302 -7765354 + SAR_DM Satellite Satellite 496 1033 -439 1 747 690 19 0 19 chrUextra 21239402 21239507 -7765149 + DOC LINE Jockey 4617 4719 -6 1 747 499 175 83 0 chrUextra 21239505 21239625 -7765031 + DMCR1A LINE CR1 2276 2405 -2065 1 747 696 243 107 11 chrUextra 21239684 21239955 -7764701 - BS LINE Jockey -1688 3438 3142 1 747 5698 1 1 0 chrUextra 21240173 21240844 -7763812 - LSU-rRNA_Dme rRNA rRNA -2768 1132 461 1 747 4779 89 0 0 chrUextra 21240944 21241615 -7763041 - R1_DM LINE R1 -3448 1908 1238 1 747 5616 0 1 1 chrUextra 21241715 21242386 -7762270 - LSU-rRNA_Dme rRNA rRNA -2877 1023 353 1 747 5806 0 0 0 chrUextra 21242486 21243157 -7761499 + TIRANT_I LTR Gypsy 2991 3661 -4031 1 747 3187 166 6 6 chrUextra 21243268 21243928 -7760728 + SAR_DM Satellite Satellite 369 1028 -444 1 747 3159 160 10 9 chrUextra 21244028 21244698 -7759958 + SAR_DM Satellite Satellite 377 1047 -425 1 747 815 0 0 0 chrUextra 21244798 21244893 -7759763 - DOC LINE Jockey -4599 126 32 1 747 23 33 0 0 chrUextra 21244938 21244968 -7759688 + AT_rich Low_complexity Low_complexity 1 30 0 1 747 5695 10 3 0 chrUextra 21245568 21246238 -7758418 - DOC2_DM LINE Jockey -2398 2395 1724 1 747 5602 15 0 6 chrUextra 21246338 21247008 -7757648 - FW_DM LINE Jockey -559 4133 3468 1 747 4811 5 4 0 chrUextra 21247108 21247671 -7756985 - R1_DM LINE R1 -4791 565 1 1 747 679 0 0 0 chrUextra 21247701 21247778 -7756878 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2578 1 747 2861 186 6 3 chrUextra 21247879 21248517 -7756139 - SAR_DM Satellite Satellite -587 885 246 1 747 399 100 14 0 chrUextra 21248477 21248547 -7756109 + ARS406_DM Unknown Unknown 1 71 -282 1 747 5008 40 1 21 chrUextra 21248660 21249318 -7755338 - Baggins1 LINE LOA 0 5453 4809 1 747 1149 28 22 22 chrUextra 21249418 21249599 -7755057 + NTS_DM Other Other 60 240 0 1 747 1559 25 0 0 chrUextra 21249599 21249797 -7754859 + NTS_DM Other Other 1 198 -42 1 747 2355 0 0 0 chrUextra 21249806 21250088 -7754568 - G2_DM LINE Jockey 0 3102 2821 1 747 2838 171 11 9 chrUextra 21250191 21250833 -7753823 - SAR_DM Satellite Satellite -635 837 195 1 747 650 127 0 8 chrUextra 21250739 21250858 -7753798 + ARS406_DM Unknown Unknown 1 118 -235 1 747 496 165 0 0 chrUextra 21250958 21251061 -7753595 - ARS406_DM Unknown Unknown -250 103 1 1 747 2798 193 5 6 chrUextra 21250970 21251627 -7753029 + SAR_DM Satellite Satellite 197 852 -620 1 747 2733 171 39 9 chrUextra 21251728 21252395 -7752261 - SAR_DM Satellite Satellite -444 1028 342 1 747 2657 197 5 6 chrUextra 21252506 21253143 -7751513 - SAR_DM Satellite Satellite -642 830 195 1 747 662 136 0 0 chrUextra 21253050 21253168 -7751488 + ARS406_DM Unknown Unknown 1 118 -235 1 747 979 201 8 8 chrUextra 21253274 21253353 -7751303 - SAR_DM Satellite Satellite -749 723 473 1 747 1086 99 0 0 chrUextra 21253353 21253525 -7751131 + ARS406_DM Unknown Unknown 1 172 -181 1 747 1861 159 20 10 chrUextra 21253543 21253938 -7750718 - SAR_DM Satellite Satellite -690 782 384 1 747 378 0 0 0 chrUextra 21254038 21254080 -7750576 + (TTCTC)n Simple_repeat Simple_repeat 4 45 0 1 747 5462 22 25 1 chrUextra 21254808 21255478 -7749178 - Copia2_I LTR Copia -136 4026 3341 1 747 5536 6 18 0 chrUextra 21255578 21256248 -7748408 + STALKER4_I LTR Gypsy 4654 5335 -1195 1 747 5268 31 6 0 chrUextra 21256348 21257018 -7747638 - MDG1_I LTR Gypsy -3707 2889 2216 1 747 3037 175 6 6 chrUextra 21257124 21257781 -7746875 - SAR_DM Satellite Satellite -569 903 247 1 747 5232 21 69 1 chrUextra 21257888 21258558 -7746098 - R1_DM LINE R1 -1264 4092 3378 1 747 1755 0 0 0 chrUextra 21259430 21259643 -7745013 + DOC LINE Jockey 698 910 -3815 1 747 3765 9 0 4 chrUextra 21259644 21260098 -7744558 + DOC LINE Jockey 1152 1603 -3122 1 747 21 95 0 0 chrUextra 21260205 21260268 -7744388 + AT_rich Low_complexity Low_complexity 1 63 0 1 747 4662 0 0 42 chrUextra 21260280 21260868 -7743788 + LSU-rRNA_Dme rRNA rRNA 1 563 -3337 1 747 2898 63 5 17 chrUextra 21261172 21261578 -7743078 - Baggins1 LINE LOA -262 5191 4791 1 747 2885 177 9 9 chrUextra 21261749 21262406 -7742250 - SAR_DM Satellite Satellite -411 1061 405 1 747 2441 102 23 5 chrUextra 21262521 21263178 -7741478 - DMSAT6 Satellite Satellite 0 669 1 1 747 5758 3 0 1 chrUextra 21263278 21263948 -7740708 - R1_DM LINE R1 -1555 3801 3133 1 747 1788 38 17 100 chrUextra 21264427 21264718 -7739938 + Baggins1 LINE LOA 143 409 -5044 1 747 5797 0 0 3 chrUextra 21264818 21265488 -7739168 + SSU-rRNA_Dme rRNA rRNA 497 1164 -831 1 747 5588 16 0 0 chrUextra 21265588 21266258 -7738398 - STALKER4_I LTR Gypsy -1545 4985 4316 1 747 2878 165 20 14 chrUextra 21266358 21267021 -7737635 + SAR_DM Satellite Satellite 390 1056 -416 1 747 5556 1 1 0 chrUextra 21267128 21267798 -7736858 + R1_DM LINE R1 462 1132 -4224 1 747 5787 1 1 1 chrUextra 21267898 21268568 -7736088 - LSU-rRNA_Dme rRNA rRNA -835 3065 2396 1 747 1662 185 10 7 chrUextra 21268669 21269337 -7735319 + SAR_DM Satellite Satellite 1 669 -582 1 747 1952 160 10 4 chrUextra 21269445 21270108 -7734548 - SAR_DM Satellite Satellite -595 666 1 1 747 5463 22 0 1 chrUextra 21270208 21270878 -7733778 + R1_DM LINE R1 3849 4517 -839 1 747 663 25 0 0 chrUextra 21270978 21271059 -7733597 + CIRCE LINE Composite 4900 4980 -1376 1 747 2547 43 211 9 chrUextra 21271213 21271648 -7733008 - R1_DM LINE R1 -4037 1319 797 1 747 5720 6 0 0 chrUextra 21271748 21272418 -7732238 - DMRT1B LINE R1 -4367 816 147 1 747 688 0 0 0 chrUextra 21272518 21272596 -7732060 - NTS_DM Other Other -162 78 1 1 747 1826 8 17 13 chrUextra 21272596 21272835 -7731821 - NTS_DM Other Other 0 240 1 1 747 1822 8 17 13 chrUextra 21272835 21273074 -7731582 - NTS_DM Other Other 0 240 1 1 747 761 0 35 26 chrUextra 21273074 21273188 -7731468 - NTS_DM Other Other 0 240 126 1 747 22 56 0 0 chrUextra 21273318 21273354 -7731302 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 322 178 50 101 chrUextra 21273399 21273518 -7731138 + Copia_I LTR Copia 4401 4513 -80 1 747 5517 10 8 0 chrUextra 21274058 21274728 -7729928 + DMRT1B LINE R1 509 1183 -4000 1 747 1016 127 72 5 chrUextra 21275277 21275498 -7729158 - DNAREP1_DM LINE Penelope -297 297 62 1 747 5629 15 0 0 chrUextra 21275598 21276268 -7728388 + ROO_I LTR Pao 5205 5874 -2382 1 747 2647 189 28 21 chrUextra 21276369 21277034 -7727622 - SAR_DM Satellite Satellite -662 669 1 1 747 409 19 19 0 chrUextra 21277138 21277190 -7727466 - NTS_DM Other Other -187 53 1 1 747 1438 15 20 20 chrUextra 21277190 21277393 -7727263 - NTS_DM Other Other 0 240 38 1 747 806 19 9 27 chrUextra 21277393 21277504 -7727152 - NTS_DM Other Other -107 133 25 1 747 21 57 0 0 chrUextra 21277530 21277565 -7727091 + AT_rich Low_complexity Low_complexity 1 35 0 1 747 1252 18 0 6 chrUextra 21277565 21277730 -7726926 - NTS_DM Other Other -39 201 38 1 747 606 13 0 0 chrUextra 21277730 21277808 -7726848 - NTS_DM Other Other -107 133 56 1 747 250 33 0 0 chrUextra 21277912 21277942 -7726714 + Baggins1 LINE LOA 4727 4756 -697 1 747 693 103 241 0 chrUextra 21277950 21278095 -7726561 + FB4_DM DNA Tc1 3908 4087 -2 1 747 4148 20 0 0 chrUextra 21278678 21279179 -7725477 - DMRT1B LINE R1 -965 4218 3718 1 747 1443 34 0 0 chrUextra 21279173 21279348 -7725308 - DMRT1B LINE R1 -1572 3611 3437 1 747 2232 184 38 6 chrUextra 21279448 21280110 -7724546 - SAR_DM Satellite Satellite -723 683 1 1 747 268 125 0 0 chrUextra 21280070 21280118 -7724538 + ARS406_DM Unknown Unknown 1 48 -305 1 747 328 109 14 86 chrUextra 21280779 21280849 -7723807 - Gypsy12_LTR LTR Gypsy -2271 65 1 1 747 318 0 0 0 chrUextra 21280849 21280888 -7723768 - Gypsy12_I LTR Gypsy 0 5546 5508 1 747 2912 173 15 9 chrUextra 21280988 21281652 -7723004 - SAR_DM Satellite Satellite -484 988 321 1 747 2561 175 44 12 chrUextra 21281761 21282399 -7722257 - SAR_DM Satellite Satellite -620 852 195 1 747 602 114 70 0 chrUextra 21282314 21282428 -7722228 + ARS406_DM Unknown Unknown 1 122 -231 1 747 3914 38 18 130 chrUextra 21282528 21283198 -7721458 - CIRCE LINE Composite -4616 1740 1146 1 747 2849 182 8 8 chrUextra 21283309 21283968 -7720688 - SAR_DM Satellite Satellite -396 1076 418 1 747 5825 1 1 0 chrUextra 21284068 21284738 -7719918 - SSU-rRNA_Dme rRNA rRNA -909 1086 416 1 747 410 36 0 0 chrUextra 21284838 21284893 -7719763 + ARS406_DM Unknown Unknown 104 158 -195 1 747 1857 187 5 7 chrUextra 21284890 21285310 -7719346 - SAR_DM Satellite Satellite -558 914 496 1 747 657 53 53 0 chrUextra 21285315 21285410 -7719246 + ARS406_DM Unknown Unknown 90 189 -164 1 747 883 113 41 12 chrUextra 21285325 21285495 -7719161 - SAR_DM Satellite Satellite -569 903 729 1 747 5703 0 0 0 chrUextra 21285608 21286278 -7718378 - ACCORD2_I LTR Gypsy -2826 4386 3717 1 747 2561 180 12 4 chrUextra 21286378 21287048 -7717608 + SAR_DM Satellite Satellite 1 674 -1037 1 747 5730 0 0 0 chrUextra 21287151 21287818 -7716838 + G_DM LINE Jockey 3643 4309 -37 1 747 761 96 8 0 chrUextra 21287918 21288043 -7716613 - ARS406_DM Unknown Unknown -227 126 1 1 747 2815 164 9 16 chrUextra 21287950 21288587 -7716069 + SAR_DM Satellite Satellite 195 827 -645 1 747 3620 128 3 20 chrUextra 21288688 21289358 -7715298 - BATUMI_I LTR Pao -5069 2845 2151 1 747 2928 171 9 11 chrUextra 21289458 21290118 -7714538 + SAR_DM Satellite Satellite 418 1076 -396 1 747 399 0 0 0 chrUextra 21290998 21291044 -7713612 + ROVER-LTR_DM LTR Gypsy 322 367 0 1 747 5036 0 0 0 chrUextra 21291044 21291668 -7712988 + ROVER-I_DM LTR Gypsy 1 624 -5960 1 747 685 0 0 0 chrUextra 21291768 21291853 -7712803 + FW_DM LINE Jockey 1679 1763 -2929 1 747 2020 26 4 50 chrUextra 21291853 21292133 -7712523 - MDG3_LTR LTR Gypsy 0 267 1 1 747 2176 7 0 0 chrUextra 21292133 21292438 -7712218 - MDG3_I LTR Gypsy 0 4986 4649 1 747 2455 102 21 9 chrUextra 21292553 21293208 -7711448 - DMSAT6 Satellite Satellite 0 662 1 1 747 2296 162 8 10 chrUextra 21293308 21293793 -7710863 + SAR_DM Satellite Satellite 420 903 -569 1 747 1015 89 0 0 chrUextra 21293800 21293958 -7710698 - ARS406_DM Unknown Unknown -195 158 1 1 747 762 184 0 6 chrUextra 21293808 21293978 -7710678 + SAR_DM Satellite Satellite 496 664 -808 1 747 798 11 0 0 chrUextra 21294078 21294169 -7710487 + (GAGAA)n Simple_repeat Simple_repeat 4 94 0 1 747 1620 0 0 0 chrUextra 21294848 21295092 -7709564 + (CACAA)n Simple_repeat Simple_repeat 1 244 0 1 747 3619 5 0 0 chrUextra 21295092 21295518 -7709138 - DMRT1B LINE R1 -139 5044 4619 1 747 464 0 0 18 chrUextra 21295618 21295675 -7708981 + (CAAGA)n Simple_repeat Simple_repeat 1 56 0 1 747 5698 1 0 3 chrUextra 21297158 21297828 -7706828 - R1_DM LINE R1 -1963 3393 2726 1 747 1192 33 16 37 chrUextra 21297929 21298120 -7706536 - NTS_DM Other Other -16 224 38 1 747 788 37 0 18 chrUextra 21298120 21298230 -7706426 - NTS_DM Other Other -107 133 26 1 747 1226 30 0 6 chrUextra 21298286 21298451 -7706205 - NTS_DM Other Other -39 201 38 1 747 870 9 0 27 chrUextra 21298451 21298563 -7706093 - NTS_DM Other Other -107 133 25 1 747 651 11 0 22 chrUextra 21298698 21298787 -7705869 + BATUMI_I LTR Pao 7877 7963 0 1 747 1909 32 31 38 chrUextra 21298787 21299074 -7705582 + BATUMI_I LTR Pao 7002 7286 -677 1 747 2301 37 0 0 chrUextra 21299072 21299368 -7705288 + STALKER4_I LTR Gypsy 2971 3266 -3264 1 747 2098 62 7 0 chrUextra 21299468 21299756 -7704900 - R1_DM LINE R1 -5066 290 1 1 747 2240 19 155 0 chrUextra 21299789 21300138 -7704518 - R1_DM LINE R1 0 5356 4954 1 747 3149 160 12 9 chrUextra 21300240 21300907 -7703749 - SAR_DM Satellite Satellite -435 1037 369 1 747 4921 55 15 5 chrUextra 21301008 21301678 -7702978 - R1_DM LINE R1 -4503 853 177 1 747 5421 25 0 0 chrUextra 21301778 21302448 -7702208 + HETA LINE telomeric 2519 3188 -2893 1 747 1794 52 32 0 chrUextra 21303320 21303570 -7701086 - QUASIMODO_I LTR Gypsy -5773 287 30 1 747 2249 101 8 31 chrUextra 21303577 21303967 -7700689 - QUASIMODO_LTR LTR Gypsy -51 607 91 1 747 710 0 0 0 chrUextra 21304088 21304171 -7700485 - LSU-rRNA_Dme rRNA rRNA -3817 83 1 1 747 21 95 0 0 chrUextra 21304183 21304246 -7700410 + AT_rich Low_complexity Low_complexity 1 63 0 1 747 34 24 0 0 chrUextra 21304459 21304500 -7700156 + AT_rich Low_complexity Low_complexity 1 41 0 1 747 1582 29 0 0 chrUextra 21304858 21305063 -7699593 + G2_DM LINE Jockey 2898 3102 0 1 747 516 203 233 0 chrUextra 21305185 21305318 -7699338 + TIRANT_I LTR Gypsy 3777 3940 -3752 1 747 2622 189 11 14 chrUextra 21305659 21306293 -7698363 + SAR_DM Satellite Satellite 377 1008 -464 1 747 4818 43 48 1 chrUextra 21306400 21307068 -7697588 - TART LINE telomeric -11609 2868 2170 1 747 5676 6 0 1 chrUextra 21307168 21307838 -7696818 + FW_DM LINE Jockey 208 876 -3816 1 747 3130 163 12 9 chrUextra 21307938 21308608 -7696048 + SAR_DM Satellite Satellite 348 1019 -453 1 747 388 22 0 0 chrUextra 21308708 21308754 -7695902 - LSU-rRNA_Dme rRNA rRNA -1215 2685 2640 1 747 2728 9 0 0 chrUextra 21308752 21309070 -7695586 - R1_DM LINE R1 0 5356 5039 1 747 2565 7 0 0 chrUextra 21309081 21309378 -7695278 - R1_DM LINE R1 0 5356 5060 1 747 850 8 31 24 chrUextra 21309479 21309606 -7695050 + NTS_DM Other Other 113 240 0 1 747 1290 6 0 18 chrUextra 21309606 21309771 -7694885 + NTS_DM Other Other 1 162 -78 1 747 488 119 36 0 chrUextra 21309881 21309965 -7694691 + NTS_DM Other Other 4 90 -150 1 747 3181 23 3 0 chrUextra 21310248 21310640 -7694016 + R1_DM LINE R1 4674 5066 -290 1 747 954 26 0 0 chrUextra 21310637 21310751 -7693905 + R1_DM LINE R1 5243 5356 0 1 747 973 60 8 0 chrUextra 21310784 21310918 -7693738 + R1_DM LINE R1 1 135 -5221 1 747 1011 11 3 3 chrUextra 21311018 21311234 -7693422 + TABOR_I LTR Gypsy 6009 6336 0 1 747 3953 0 2 2 chrUextra 21311232 21311688 -7692968 + TABOR_LTR LTR Gypsy 1 456 -50 1 747 2646 181 37 21 chrUextra 21312558 21313228 -7691428 - SAR_DM Satellite Satellite -354 1118 438 1 747 2732 176 21 14 chrUextra 21313334 21313985 -7690671 - SAR_DM Satellite Satellite -593 879 224 1 747 229 217 87 0 chrUextra 21313929 21313998 -7690658 + ARS406_DM Unknown Unknown 1 75 -278 1 747 1727 58 0 0 chrUextra 21314321 21314547 -7690109 + PROTOP_A DNA P 74 299 -806 1 747 1198 46 90 0 chrUextra 21314534 21314768 -7689888 + PROTOP_B DNA P 520 754 -399 1 747 332 0 0 0 chrUextra 21314869 21314907 -7689749 + SSU-rRNA_Dme rRNA rRNA 1958 1995 0 1 747 21 89 0 0 chrUextra 21314926 21314982 -7689674 + AT_rich Low_complexity Low_complexity 1 56 0 1 747 1239 52 62 0 chrUextra 21315638 21315986 -7688670 - PROTOP_B DNA P -399 754 506 1 747 2100 53 72 0 chrUextra 21315988 21316308 -7688348 - PROTOP_A DNA P -129 976 634 1 747 2605 37 28 34 chrUextra 21316408 21317078 -7687578 + DM176_I LTR Gypsy 151 761 -5659 1 747 388 22 0 0 chrUextra 21317178 21317224 -7687432 - LSU-rRNA_Dme rRNA rRNA -1215 2685 2640 1 747 5355 5 0 2 chrUextra 21317222 21317848 -7686808 - R1_DM LINE R1 0 5356 4732 1 747 5759 0 0 1 chrUextra 21317948 21318618 -7686038 - R1_DM LINE R1 -3188 2168 1500 1 747 22 56 0 0 chrUextra 21318777 21318813 -7685843 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 255 125 0 0 chrUextra 21318826 21318866 -7685790 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21318909 21318949 -7685707 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21319001 21319041 -7685615 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21319093 21319133 -7685523 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21319185 21319225 -7685431 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 29 28 0 0 chrUextra 21319230 21319266 -7685390 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 365 0 0 0 chrUextra 21319346 21319388 -7685268 - LSU-rRNA_Dme rRNA rRNA 0 3900 3859 1 747 619 12 12 36 chrUextra 21319488 21319572 -7685084 - NTS_DM Other Other -134 106 25 1 747 1252 18 0 6 chrUextra 21319624 21319789 -7684867 - NTS_DM Other Other -39 201 38 1 747 870 9 0 27 chrUextra 21319789 21319901 -7684755 - NTS_DM Other Other -107 133 25 1 747 22 56 0 0 chrUextra 21319927 21319963 -7684693 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 230 150 0 0 chrUextra 21319976 21320016 -7684640 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21320059 21320099 -7684557 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 3494 54 44 0 chrUextra 21320258 21320754 -7683902 + PROTOP_A DNA P 588 1105 0 1 747 5702 1 0 5 chrUextra 21321028 21321698 -7682958 - FW_DM LINE Jockey -457 4235 3569 1 747 2514 46 80 17 chrUextra 21321798 21322149 -7682507 - BATUMI_I LTR Pao -2143 5820 5448 1 747 749 31 0 0 chrUextra 21322342 21322438 -7682218 - DMCR1A LINE CR1 0 4470 4375 1 747 5703 1 1 5 chrUextra 21322568 21323238 -7681418 - LSU-rRNA_Dme rRNA rRNA -2482 1418 751 1 747 1726 17 21 21 chrUextra 21323342 21323582 -7681074 - NTS_DM Other Other 0 240 1 1 747 1734 21 17 17 chrUextra 21323582 21323822 -7680834 - NTS_DM Other Other 0 240 1 1 747 1258 16 21 21 chrUextra 21323822 21324008 -7680648 - NTS_DM Other Other 0 240 55 1 747 571 148 40 16 chrUextra 21324157 21324281 -7680375 + DMTOM1_LTR LTR Gypsy 284 410 0 1 747 391 113 0 27 chrUextra 21324281 21324345 -7680311 + DMTOM1_LTR LTR Gypsy 349 410 0 1 747 265 240 23 76 chrUextra 21324345 21324476 -7680180 + ROVER-I_DM LTR Gypsy 1 124 -6460 1 747 234 291 12 29 chrUextra 21324595 21324765 -7679891 + (TAAA)n Simple_repeat Simple_repeat 2 168 0 1 747 5816 1 0 1 chrUextra 21324878 21325548 -7679108 - LSU-rRNA_Dme rRNA rRNA -798 3102 2434 1 747 1803 8 17 17 chrUextra 21325655 21325895 -7678761 - NTS_DM Other Other 0 240 1 1 747 1843 4 17 13 chrUextra 21325895 21326134 -7678522 - NTS_DM Other Other 0 240 1 1 747 1319 6 22 16 chrUextra 21326134 21326318 -7678338 - NTS_DM Other Other 0 240 56 1 747 21 57 0 0 chrUextra 21326754 21326789 -7677867 + AT_rich Low_complexity Low_complexity 1 35 0 1 747 34 24 0 0 chrUextra 21327298 21327339 -7677317 + AT_rich Low_complexity Low_complexity 1 41 0 1 747 1265 191 230 43 chrUextra 21327349 21327858 -7676798 - HETA LINE telomeric -171 5910 5307 1 747 228 227 53 0 chrUextra 21327958 21328033 -7676623 - HETA LINE telomeric -1511 4570 4492 1 747 23 0 0 0 chrUextra 21328086 21328109 -7676547 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 2249 49 0 0 chrUextra 21328151 21328438 -7676218 - PROTOP DNA P -4120 360 74 1 747 5826 1 1 0 chrUextra 21328728 21329398 -7675258 - LSU-rRNA_Dme rRNA rRNA -1391 2509 1839 1 747 2093 12 0 0 chrUextra 21329498 21329741 -7674915 - LSU-rRNA_Dme rRNA rRNA -1018 2882 2640 1 747 3643 14 0 0 chrUextra 21329739 21330168 -7674488 - R1_DM LINE R1 0 5356 4928 1 747 2329 4 0 4 chrUextra 21330268 21330546 -7674110 - LSU-rRNA_Dme rRNA rRNA -1433 2467 2191 1 747 246 150 0 0 chrUextra 21330598 21330638 -7674018 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21330690 21330730 -7673926 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21330782 21330822 -7673834 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 22 56 0 0 chrUextra 21330827 21330863 -7673793 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 5229 22 6 5 chrUextra 21331038 21331708 -7672948 - PROTOP_A DNA P -386 719 49 1 747 3248 199 0 0 chrUextra 21331808 21332478 -7672178 + ROVER-I_DM LTR Gypsy 2915 3584 -3000 1 747 3723 16 2 0 chrUextra 21332578 21333006 -7671650 - FW_DM LINE Jockey -3670 1022 594 1 747 1156 42 0 0 chrUextra 21333012 21333154 -7671502 - R1_DM LINE R1 -2242 3114 2973 1 747 743 53 0 0 chrUextra 21333153 21333248 -7671408 + FW_DM LINE Jockey 353 447 -4245 1 747 644 0 14 0 chrUextra 21333352 21333425 -7671231 - NTS_DM Other Other -166 74 1 1 747 1910 0 17 17 chrUextra 21333425 21333665 -7670991 - NTS_DM Other Other 0 240 1 1 747 1904 8 17 13 chrUextra 21333665 21333904 -7670752 - NTS_DM Other Other 0 240 1 1 747 794 0 35 26 chrUextra 21333904 21334018 -7670638 - NTS_DM Other Other 0 240 126 1 747 6117 1 0 0 chrUextra 21334118 21334788 -7669868 - SSU-rRNA_Dme rRNA rRNA -924 1071 402 1 747 5512 35 10 10 chrUextra 21334888 21335558 -7669098 - BATUMI_I LTR Pao -1588 6375 5706 1 747 3066 87 84 34 chrUextra 21335665 21336226 -7668430 - BATUMI_I LTR Pao -7374 589 1 1 747 833 20 0 10 chrUextra 21336226 21336327 -7668329 - BATUMI_I LTR Pao -679 7284 7185 1 747 5244 5 0 0 chrUextra 21336428 21337010 -7667646 - R1_DM LINE R1 -422 4934 4353 1 747 838 11 0 0 chrUextra 21337005 21337098 -7667558 - LSU-rRNA_Dme rRNA rRNA -1248 2652 2560 1 747 615 11 0 33 chrUextra 21337198 21337289 -7667367 + NTS_DM Other Other 75 162 -78 1 747 514 119 36 0 chrUextra 21337399 21337483 -7667173 + NTS_DM Other Other 4 90 -150 1 747 28 48 0 0 chrUextra 21337756 21337798 -7666858 + AT_rich Low_complexity Low_complexity 1 42 0 1 747 4253 72 8 5 chrUextra 21337968 21338638 -7666018 + G2_DM LINE Jockey 4 483 -2619 1 747 773 159 38 21 chrUextra 21339222 21339408 -7665248 - Stalker2_I LTR Gypsy -6520 882 694 1 747 2938 180 30 14 chrUextra 21339509 21340178 -7664478 + SAR_DM Satellite Satellite 195 874 -598 1 747 5096 45 18 0 chrUextra 21340278 21340948 -7663708 - TART_B1 LINE telomeric -7112 3542 2761 1 747 6092 3 0 0 chrUextra 21341048 21341718 -7662938 + LSU-rRNA_Dme rRNA rRNA 1972 2641 -1259 1 747 3006 3 0 0 chrUextra 21341834 21342164 -7662492 - TRANSPAC_LTR LTR Gypsy 0 330 1 1 747 2604 6 0 6 chrUextra 21342163 21342488 -7662168 - TRANSPAC_I LTR Gypsy 0 4590 4268 1 747 2655 178 13 5 chrUextra 21342591 21343146 -7661510 - SAR_DM Satellite Satellite -620 852 294 1 747 869 51 8 0 chrUextra 21343140 21343258 -7661398 + ARS406_DM Unknown Unknown 62 180 -173 1 747 2990 0 0 0 chrUextra 21343358 21343682 -7660974 - ROO_LTR LTR Pao -104 324 1 1 747 3482 256 32 49 chrUextra 21344151 21345538 -7659118 - SAR_DM Satellite Satellite -396 1363 1 1 747 726 291 20 10 chrUextra 21345273 21345568 -7659088 + XDMR_DM Unknown Unknown 6 303 -57 1 747 4931 29 47 0 chrUextra 21345668 21346264 -7658392 + DMCR1A LINE CR1 3847 4470 0 1 747 315 26 0 0 chrUextra 21346300 21346338 -7658318 + DOC2_DM LINE Jockey 1566 1603 -3190 1 747 5477 46 1 1 chrUextra 21346438 21347108 -7657548 + R1_DM LINE R1 1072 1741 -3615 1 747 5825 6 6 0 chrUextra 21347208 21347878 -7656778 - DMRT1B LINE R1 -3874 1309 636 1 747 6077 5 1 0 chrUextra 21347978 21348648 -7656008 + R2_DM LINE R2 2694 3364 -243 1 747 511 31 0 0 chrUextra 21348748 21348813 -7655843 - ALUII_DM Unknown Unknown -175 65 1 1 747 22 35 0 0 chrUextra 21349045 21349074 -7655582 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 37 39 0 0 chrUextra 21349176 21349227 -7655429 + AT_rich Low_complexity Low_complexity 1 51 0 1 747 21 0 0 0 chrUextra 21349941 21349962 -7654694 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 274 31 0 0 chrUextra 21349978 21350010 -7654646 - NTS_DM Other Other -207 33 2 1 747 4217 56 17 17 chrUextra 21350290 21350958 -7653698 - PROTOP DNA P -79 4401 3892 1 747 6101 0 1 1 chrUextra 21351058 21351728 -7652928 - LSU-rRNA_Dme rRNA rRNA 0 3900 3231 1 747 34 24 0 0 chrUextra 21352054 21352095 -7652561 + AT_rich Low_complexity Low_complexity 1 41 0 1 747 3178 163 11 14 chrUextra 21353373 21354033 -7650623 - SAR_DM Satellite Satellite -569 903 246 1 747 246 156 0 0 chrUextra 21353993 21354038 -7650618 + ARS406_DM Unknown Unknown 1 45 -308 1 747 702 0 0 0 chrUextra 21354138 21354216 -7650440 + (GAGAA)n Simple_repeat Simple_repeat 4 81 0 1 747 3426 258 43 27 chrUextra 21354908 21356346 -7648310 + SAR_DM Satellite Satellite 1 1461 -225 1 747 5288 2 0 2 chrUextra 21356538 21357118 -7647538 + SSU-rRNA_Dme rRNA rRNA 1 579 -1416 1 747 1067 192 30 14 chrUextra 21357997 21358658 -7645998 - SAR_DM Satellite Satellite -680 671 1 1 747 3434 204 3 0 chrUextra 21358758 21359426 -7645230 + ROVER-I_DM LTR Gypsy 2340 3009 -3575 1 747 2697 225 24 16 chrUextra 21359530 21360198 -7644458 - ROVER-I_DM LTR Gypsy -4031 2553 1881 1 747 4218 58 16 7 chrUextra 21360298 21360854 -7643802 + DMCR1A LINE CR1 3674 4234 -236 1 747 768 98 18 0 chrUextra 21360856 21360968 -7643688 + DMCR1A LINE CR1 4353 4466 -4 1 747 1683 69 8 29 chrUextra 21361499 21361738 -7642918 - Baggins1 LINE LOA -262 5191 4958 1 747 3120 185 14 5 chrUextra 21361840 21362508 -7642148 - SAR_DM Satellite Satellite -593 879 206 1 747 5697 22 5 1 chrUextra 21362609 21363278 -7641378 - R1_DM LINE R1 -286 5070 4400 1 747 5869 16 0 0 chrUextra 21363378 21364048 -7640608 - DMRT1B LINE R1 -1566 3617 2948 1 93 3024 162 37 17 chrUextra 21364148 21364801 -7639855 - SAR_DM Satellite Satellite -486 986 321 1 748 456 319 20 16 chrUextra 21365105 21365376 -7639280 - GTWIN_I LTR Gypsy -2883 3538 3234 1 748 534 291 33 30 chrUextra 21365368 21365588 -7639068 - GTWIN_I LTR Gypsy -2914 3507 3232 1 748 21 89 0 0 chrUextra 21366034 21366090 -7638566 + AT_rich Low_complexity Low_complexity 1 56 0 1 748 2269 0 4 0 chrUextra 21366109 21366358 -7638298 - SSU-rRNA_Dme rRNA rRNA 0 1995 1746 1 748 5887 12 0 8 chrUextra 21367228 21367897 -7636759 + Gypsy12_I LTR Gypsy 805 1468 -4078 1 748 5751 31 0 0 chrUextra 21367998 21368668 -7635988 - R1_DM LINE R1 -3368 1988 1319 1 748 1487 207 44 5 chrUextra 21368770 21369438 -7635218 - SAR_DM Satellite Satellite -727 694 1 1 748 5791 12 9 1 chrUextra 21369538 21370208 -7634448 - Copia2_I LTR Copia -3273 889 215 1 748 249 32 0 0 chrUextra 21370308 21370339 -7634317 + ARS406_DM Unknown Unknown 129 159 -194 1 748 1851 165 16 8 chrUextra 21370345 21370974 -7633682 - SAR_DM Satellite Satellite -569 634 1 1 748 31 26 0 0 chrUextra 21371391 21371429 -7633227 + AT_rich Low_complexity Low_complexity 1 38 0 1 748 426 58 0 0 chrUextra 21371848 21371900 -7632756 - NTS_DM Other Other -158 82 31 1 748 890 18 0 27 chrUextra 21371892 21372004 -7632652 - NTS_DM Other Other -107 133 25 1 748 1304 18 0 6 chrUextra 21372056 21372221 -7632435 - NTS_DM Other Other -39 201 38 1 748 907 9 0 27 chrUextra 21372221 21372333 -7632323 - NTS_DM Other Other -107 133 25 1 748 22 56 0 0 chrUextra 21372359 21372395 -7632261 + AT_rich Low_complexity Low_complexity 1 36 0 1 748 269 125 0 0 chrUextra 21372408 21372448 -7632208 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 748 3464 20 2 0 chrUextra 21372618 21373019 -7631637 + DIVER2_I LTR Pao 3746 4147 0 1 748 2287 26 0 11 chrUextra 21373019 21373288 -7631368 + DIVER2_LTR LTR Pao 1 266 -119 1 748 595 32 21 11 chrUextra 21373388 21373483 -7631173 + NTS_DM Other Other 106 201 -39 1 748 907 9 0 27 chrUextra 21373535 21373647 -7631009 + NTS_DM Other Other 25 133 -107 1 748 1304 18 0 6 chrUextra 21373647 21373812 -7630844 + NTS_DM Other Other 38 201 -39 1 748 21 57 0 0 chrUextra 21373812 21373847 -7630809 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 870 9 9 27 chrUextra 21373873 21373984 -7630672 + NTS_DM Other Other 25 133 -107 1 748 644 14 0 0 chrUextra 21373984 21374058 -7630598 + NTS_DM Other Other 38 111 -129 1 748 3010 182 16 9 chrUextra 21374158 21374828 -7629828 - SAR_DM Satellite Satellite -496 976 302 1 748 2217 4 4 0 chrUextra 21374928 21375187 -7629469 - Copia_LTR LTR Copia -16 260 1 1 748 524 115 31 0 chrUextra 21375264 21375360 -7629296 - PROTOP DNA P -861 3619 3521 1 748 1191 27 0 0 chrUextra 21375698 21375845 -7628811 + (TCTTG)n Simple_repeat Simple_repeat 4 150 0 1 748 2946 196 6 5 chrUextra 21376471 21377126 -7627530 - SAR_DM Satellite Satellite -593 879 224 1 748 407 149 0 0 chrUextra 21377064 21377138 -7627518 + ARS406_DM Unknown Unknown 1 74 -279 1 748 365 199 99 62 chrUextra 21377240 21377401 -7627255 + DMCR1A LINE CR1 4263 4429 -41 1 748 21 0 0 0 chrUextra 21377523 21377544 -7627112 + AT_rich Low_complexity Low_complexity 1 21 0 1 748 766 103 0 0 chrUextra 21378008 21378125 -7626531 - ARS406_DM Unknown Unknown -236 117 1 1 748 2786 191 22 8 chrUextra 21378032 21378676 -7625980 + SAR_DM Satellite Satellite 195 847 -625 1 748 892 90 0 0 chrUextra 21378778 21378911 -7625745 - ARS406_DM Unknown Unknown -220 133 1 1 748 2965 183 5 6 chrUextra 21378815 21379448 -7625208 + SAR_DM Satellite Satellite 192 823 -649 1 748 2877 188 10 22 chrUextra 21379548 21380218 -7624438 + SAR_DM Satellite Satellite 446 1107 -365 1 748 291 0 0 0 chrUextra 21380318 21380352 -7624304 - R1_DM LINE R1 -5322 34 1 1 748 5532 2 0 25 chrUextra 21380352 21380987 -7623669 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2014 1 748 2754 177 31 23 chrUextra 21381087 21381740 -7622916 + SAR_DM Satellite Satellite 462 1119 -353 1 748 305 174 49 39 chrUextra 21381654 21381756 -7622900 - XDMR_DM Unknown Unknown 0 360 258 1 748 21 89 0 0 chrUextra 21382360 21382416 -7622240 + AT_rich Low_complexity Low_complexity 1 56 0 1 748 776 0 0 11 chrUextra 21382435 21382525 -7622131 - SSU-rRNA_Dme rRNA rRNA 0 1995 1907 1 748 5902 11 5 0 chrUextra 21382625 21383294 -7621362 - R1_DM LINE R1 -389 4967 4296 1 748 1116 7 14 20 chrUextra 21383394 21383540 -7621116 + NTS_DM Other Other 18 162 -78 1 748 514 119 36 0 chrUextra 21383650 21383734 -7620922 + NTS_DM Other Other 4 90 -150 1 748 28 48 0 0 chrUextra 21384007 21384049 -7620607 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 5945 0 0 3 chrUextra 21384163 21384832 -7619824 + DOC LINE Jockey 1670 2336 -2389 1 748 22 35 0 0 chrUextra 21385023 21385052 -7619604 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chrUextra 21385153 21385204 -7619452 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chrUextra 21385559 21385601 -7619055 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 2893 180 15 11 chrUextra 21385702 21386359 -7618297 - SAR_DM Satellite Satellite -633 839 180 1 748 5577 30 1 0 chrUextra 21386470 21387139 -7617517 + HETA LINE telomeric 2516 3185 -2896 1 748 5983 5 0 0 chrUextra 21387239 21387908 -7616748 - DOC LINE Jockey -2820 1905 1237 1 748 2973 221 50 16 chrUextra 21388777 21390215 -7614441 - SAR_DM Satellite Satellite -443 1486 1 1 748 667 11 11 33 chrUextra 21390315 21390405 -7614251 - NTS_DM Other Other -128 112 25 1 748 21 57 0 0 chrUextra 21390431 21390466 -7614190 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 1252 18 0 6 chrUextra 21390466 21390631 -7614025 - NTS_DM Other Other -39 201 38 1 748 852 18 0 27 chrUextra 21390631 21390743 -7613913 - NTS_DM Other Other -107 133 25 1 748 21 57 0 0 chrUextra 21390769 21390804 -7613852 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 1252 18 0 6 chrUextra 21390804 21390969 -7613687 - NTS_DM Other Other -39 201 38 1 748 518 108 81 0 chrUextra 21391123 21391234 -7613422 + TART LINE telomeric 10370 10489 -3988 1 748 34 24 0 0 chrUextra 21391247 21391288 -7613368 + AT_rich Low_complexity Low_complexity 1 41 0 1 748 1167 7 0 0 chrUextra 21392112 21392247 -7612409 - 5S_DM RNA RNA 0 135 1 1 748 243 0 0 0 chrUextra 21392488 21392518 -7612138 - 5S_DM RNA RNA 0 135 106 1 748 5595 21 0 0 chrUextra 21392622 21393291 -7611365 + R1_DM LINE R1 3999 4667 -689 1 748 1694 23 0 14 chrUextra 21393841 21394060 -7610596 - QUASIMODO_LTR LTR Gypsy 0 658 443 1 748 2203 0 0 4 chrUextra 21394160 21394419 -7610237 - R1_DM LINE R1 -299 5057 4800 1 748 3512 0 0 0 chrUextra 21394426 21394829 -7609827 - R1_DM LINE R1 0 5356 4954 1 748 34 24 0 0 chrUextra 21395195 21395236 -7609420 + AT_rich Low_complexity Low_complexity 1 41 0 1 748 5537 17 0 0 chrUextra 21395703 21396367 -7608289 + QUASIMODO_I LTR Gypsy 412 1075 -4985 1 748 5624 0 1 1 chrUextra 21396467 21397136 -7607520 + ROO_I LTR Pao 1593 2261 -5995 1 748 5658 8 1 5 chrUextra 21397237 21397905 -7606751 - SSU-rRNA_Dme rRNA rRNA -327 1668 1003 1 748 5588 16 0 1 chrUextra 21398005 21398674 -7605982 - FW_DM LINE Jockey -694 3998 3331 1 748 2865 172 11 11 chrUextra 21398781 21399440 -7605216 - SAR_DM Satellite Satellite -532 940 282 1 748 5558 16 0 3 chrUextra 21399543 21400212 -7604444 + Invader3_I LTR Gypsy 3658 4324 -564 1 748 2269 165 8 26 chrUextra 21400312 21400815 -7603841 + SAR_DM Satellite Satellite 421 914 -558 1 748 1040 82 0 0 chrUextra 21400812 21400970 -7603686 - ARS406_DM Unknown Unknown -195 158 1 1 748 386 209 0 19 chrUextra 21400874 21400981 -7603675 + SAR_DM Satellite Satellite 192 296 -1176 1 748 2175 148 48 10 chrUextra 21401081 21401560 -7603096 + ROVER-I_DM LTR Gypsy 6088 6584 0 1 748 1094 97 32 21 chrUextra 21401560 21401750 -7602906 + ROVER-LTR_DM LTR Gypsy 1 192 -175 1 748 2836 170 16 15 chrUextra 21401850 21402519 -7602137 - SAR_DM Satellite Satellite -560 912 243 1 748 2832 218 44 15 chrUextra 21402619 21404057 -7600599 + SAR_DM Satellite Satellite 1 1479 -404 1 748 2781 179 9 19 chrUextra 21404157 21404825 -7599831 + SAR_DM Satellite Satellite 447 1107 -365 1 748 2469 90 24 15 chrUextra 21404926 21405592 -7599064 - DMSAT6 Satellite Satellite -32 671 1 1 748 2664 176 8 11 chrUextra 21405695 21406322 -7598334 - SAR_DM Satellite Satellite -653 819 195 1 748 868 96 0 0 chrUextra 21406229 21406364 -7598292 + ARS406_DM Unknown Unknown 1 135 -218 1 748 5156 52 1 0 chrUextra 21406464 21407132 -7597524 - BATUMI_I LTR Pao -2892 5071 4403 1 748 5343 19 21 8 chrUextra 21407233 21407902 -7596754 + FW_DM LINE Jockey 3830 4507 -185 1 748 2886 177 9 11 chrUextra 21408002 21408671 -7595985 + SAR_DM Satellite Satellite 209 876 -596 1 748 5630 0 1 0 chrUextra 21408771 21409440 -7595216 - ROO_I LTR Pao -3259 4997 4328 1 748 3217 164 8 6 chrUextra 21409541 21410209 -7594447 + SAR_DM Satellite Satellite 369 1037 -435 1 748 1845 218 80 36 chrUextra 21410309 21410946 -7593710 + TAHRE LINE telomeric 9370 10034 -429 1 748 5410 12 43 0 chrUextra 21411079 21411747 -7592909 + Invader4_I LTR Gypsy 1152 1848 -565 1 748 1459 243 51 48 chrUextra 21411848 21412513 -7592143 - SAR_DM Satellite Satellite -640 666 1 1 748 744 118 0 0 chrUextra 21412616 21412743 -7591913 - ARS406_DM Unknown Unknown -226 127 1 1 748 2715 182 9 8 chrUextra 21412650 21413285 -7591371 + SAR_DM Satellite Satellite 195 830 -642 1 748 1079 299 3 3 chrUextra 21413672 21414048 -7590608 + Copia2_I LTR Copia 2595 2970 -1192 1 748 5683 1 1 1 chrUextra 21414154 21414823 -7589833 + R1_DM LINE R1 1068 1736 -3620 1 748 291 232 0 0 chrUextra 21414939 21415008 -7589648 + BS2 LINE Jockey 4146 4214 -507 1 748 212 0 0 35 chrUextra 21415548 21415577 -7589079 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1 748 1256 20 0 7 chrUextra 21415692 21415844 -7588812 + (CACAA)n Simple_repeat Simple_repeat 3 153 0 1 748 4428 4 0 0 chrUextra 21415844 21416361 -7588295 - DMRT1B LINE R1 -140 5043 4527 1 748 2934 184 8 6 chrUextra 21416461 21417128 -7587528 + SAR_DM Satellite Satellite 256 923 -549 1 748 2933 172 14 8 chrUextra 21417230 21417885 -7586771 + SAR_DM Satellite Satellite 403 1061 -411 1 748 2434 176 20 25 chrUextra 21418000 21418613 -7586043 + SAR_DM Satellite Satellite 185 794 -678 1 748 393 53 18 0 chrUextra 21418610 21418667 -7585989 - ARS406_DM Unknown Unknown -194 159 102 1 748 5879 0 0 0 chrUextra 21418768 21419437 -7585219 - Gypsy6_I LTR Gypsy -2535 4477 3809 1 748 1930 0 0 0 chrUextra 21419581 21419803 -7584853 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 1 748 21 95 0 0 chrUextra 21419815 21419878 -7584778 + AT_rich Low_complexity Low_complexity 1 63 0 1 748 34 24 0 0 chrUextra 21420091 21420132 -7584524 + AT_rich Low_complexity Low_complexity 1 41 0 1 748 4377 18 2 54 chrUextra 21420306 21420895 -7583761 - CIRCE LINE Composite -4494 1862 1305 1 748 463 324 18 18 chrUextra 21420738 21420961 -7583695 - Gypsy12_I LTR Gypsy -2177 3369 3147 1 748 5719 5 0 0 chrUextra 21421075 21421744 -7582912 + DMRT1B LINE R1 4130 4798 -385 1 748 4906 54 0 5 chrUextra 21421846 21422513 -7582143 + STALKER4_I LTR Gypsy 4680 5343 -1187 1 748 2463 229 24 14 chrUextra 21422613 21423282 -7581374 - G_DM LINE Jockey -2776 1570 895 1 748 2752 174 12 16 chrUextra 21423382 21424024 -7580632 - SAR_DM Satellite Satellite -641 831 192 1 748 783 89 8 0 chrUextra 21423928 21424051 -7580605 + ARS406_DM Unknown Unknown 1 124 -229 1 748 2395 93 14 16 chrUextra 21424151 21424820 -7579836 - DMSAT6 Satellite Satellite -90 667 1 1 748 999 32 0 0 chrUextra 21425466 21425589 -7579067 + (CAAAA)n Simple_repeat Simple_repeat 2 124 0 1 748 3316 0 0 3 chrUextra 21425689 21426071 -7578585 + LSU-rRNA_Dme rRNA rRNA 3520 3900 0 1 748 22 56 0 0 chrUextra 21426143 21426179 -7578477 + AT_rich Low_complexity Low_complexity 1 36 0 1 748 246 150 0 0 chrUextra 21426184 21426224 -7578432 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 748 21 57 0 0 chrUextra 21426237 21426272 -7578384 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 246 150 0 0 chrUextra 21426277 21426317 -7578339 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 748 4905 63 3 6 chrUextra 21426458 21427127 -7577529 - BATUMI_I LTR Pao -3939 4024 3358 1 748 5673 1 1 1 chrUextra 21427227 21427896 -7576760 - R1_DM LINE R1 -3633 1723 1055 1 748 2802 179 12 21 chrUextra 21427996 21428665 -7575991 + SAR_DM Satellite Satellite 200 862 -610 1 748 5618 16 0 0 chrUextra 21428765 21429434 -7575222 + Invader3_I LTR Gypsy 1927 2595 -2293 1 748 2500 186 8 58 chrUextra 21429534 21430203 -7574453 - SAR_DM Satellite Satellite -396 1076 442 1 748 1998 163 9 2 chrUextra 21431085 21431521 -7573135 - ROVER-I_DM LTR Gypsy -156 6428 5990 1 748 1093 135 0 0 chrUextra 21431556 21431741 -7572915 - ROVER-I_DM LTR Gypsy -1276 5308 5124 1 748 3053 165 11 9 chrUextra 21431842 21432502 -7572154 - SAR_DM Satellite Satellite -478 994 334 1 748 1069 70 515 6 chrUextra 21433384 21433728 -7570928 + PROTOP_B DNA P 336 856 -297 1 748 2109 94 0 3 chrUextra 21433736 21434044 -7570612 - Jockey2 LINE Jockey -1608 1820 1514 1 748 3616 36 95 0 chrUextra 21434148 21434645 -7570011 - PROTOP DNA P -3936 544 1 1 748 5512 18 0 0 chrUextra 21434917 21435586 -7569070 + QUASIMODO_I LTR Gypsy 2456 3124 -2936 1 748 4857 66 1 8 chrUextra 21435686 21436355 -7568301 + BATUMI_I LTR Pao 3395 4059 -3904 1 748 5756 6 0 0 chrUextra 21436455 21437124 -7567532 - R1_DM LINE R1 -544 4812 4144 1 748 1755 15 0 0 chrUextra 21437224 21437430 -7567226 + PROTOP_B DNA P 952 1153 0 1 748 3881 9 4 2 chrUextra 21437430 21437893 -7566763 - TART LINE telomeric -3953 10524 10061 1 748 2179 161 134 14 chrUextra 21437994 21438662 -7565994 - TART LINE telomeric -783 9680 8996 1 748 2072 169 34 38 chrUextra 21438859 21439388 -7565268 - Gypsy12A_LTR LTR Gypsy -989 1291 765 1 748 21 0 0 0 chrUextra 21439392 21439413 -7565243 + AT_rich Low_complexity Low_complexity 1 21 0 1 748 331 45 0 0 chrUextra 21439531 21439575 -7565081 - ARS406_DM Unknown Unknown -220 133 90 1 748 2603 184 5 19 chrUextra 21439580 21440200 -7564456 + SAR_DM Satellite Satellite 496 1106 -366 1 748 2671 161 9 9 chrUextra 21440300 21440969 -7563687 - SAR_DM Satellite Satellite -610 669 1 1 748 2732 26 3 0 chrUextra 21441069 21441410 -7563246 + R1_DM LINE R1 4725 5066 -290 1 748 943 35 0 0 chrUextra 21441407 21441521 -7563135 + R1_DM LINE R1 5243 5356 0 1 748 1315 76 5 0 chrUextra 21441554 21441738 -7562918 + R1_DM LINE R1 1 185 -5171 1 748 514 0 0 13 chrUextra 21441838 21441917 -7562739 + HMSBEAGLE_I LTR Gypsy 719 796 -5733 1 748 953 35 52 12 chrUextra 21441917 21442089 -7562567 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 748 3570 0 0 0 chrUextra 21442089 21442507 -7562149 + HMSBEAGLE_I LTR Gypsy 969 1386 -5143 1 748 186 71 0 0 chrUextra 21442833 21442861 -7561795 + (GAA)n Simple_repeat Simple_repeat 3 30 0 1 748 3095 177 8 8 chrUextra 21444151 21444795 -7559861 - SAR_DM Satellite Satellite -634 838 195 1 748 748 107 0 0 chrUextra 21444702 21444814 -7559842 + ARS406_DM Unknown Unknown 1 112 -241 1 748 6116 1 6 0 chrUextra 21444915 21445583 -7559073 + LSU-rRNA_Dme rRNA rRNA 2324 2995 -905 1 748 5801 28 14 0 chrUextra 21445683 21446352 -7558304 + FROGGER_I LTR Copia 1289 1966 -111 1 748 2964 182 8 22 chrUextra 21447990 21448658 -7555998 - SAR_DM Satellite Satellite -359 1113 456 1 748 5288 15 2 2 chrUextra 21449528 21450123 -7554533 + R1_DM LINE R1 4762 5356 0 1 748 354 24 0 0 chrUextra 21450156 21450197 -7554459 + R1_DM LINE R1 1 41 -5315 1 748 2905 181 11 39 chrUextra 21450300 21450966 -7553690 - SAR_DM Satellite Satellite -577 895 249 1 748 5832 24 1 1 chrUextra 21451066 21451735 -7552921 - R1_DM LINE R1 -1431 3925 3257 1 748 3970 13 41 0 chrUextra 21451837 21452302 -7552354 - IDEFIX_LTR LTR Gypsy -110 484 1 1 748 1686 5 0 15 chrUextra 21452302 21452504 -7552152 - IDEFIX_I LTR Gypsy 0 5628 5430 1 748 2655 13 3 0 chrUextra 21452612 21452912 -7551744 + R1_DM LINE R1 4766 5066 -290 1 748 1010 35 0 0 chrUextra 21452909 21453023 -7551633 + R1_DM LINE R1 5243 5356 0 1 748 1607 78 9 0 chrUextra 21453056 21453273 -7551383 + R1_DM LINE R1 1 219 -5137 1 748 1709 5 0 5 chrUextra 21453373 21453560 -7551096 + LSU-rRNA_Dme rRNA rRNA 2473 2658 -1242 1 748 4446 6 0 0 chrUextra 21453557 21454042 -7550614 + R1_DM LINE R1 4008 4492 -864 1 748 943 9 9 0 chrUextra 21454142 21454247 -7550409 + LSU-rRNA_Dme rRNA rRNA 3795 3900 0 1 748 25 0 0 0 chrUextra 21454319 21454344 -7550312 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 241 163 0 58 chrUextra 21454346 21454398 -7550258 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 1 748 241 163 0 58 chrUextra 21454446 21454498 -7550158 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 1 748 25 0 0 0 chrUextra 21454517 21454542 -7550114 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 233 154 258 15 chrUextra 21454544 21454610 -7550046 + LSU-rRNA_Dme rRNA rRNA 2570 2651 -1249 1 748 266 196 0 19 chrUextra 21454637 21454689 -7549967 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 748 266 196 0 19 chrUextra 21454729 21454781 -7549875 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 748 2349 116 27 27 chrUextra 21454914 21455580 -7549076 - DMSAT6 Satellite Satellite -76 666 1 1 748 5706 29 24 0 chrUextra 21455683 21456349 -7548307 - R1_DM LINE R1 -1976 3380 2699 1 748 1514 132 57 3 chrUextra 21456482 21456764 -7547892 + DNAREP1_DM LINE Penelope 1 297 -297 1 748 6034 1 6 3 chrUextra 21457218 21457887 -7546769 + LSU-rRNA_Dme rRNA rRNA 1036 1706 -2194 1 748 4739 52 1 58 chrUextra 21457987 21458656 -7546000 + BATUMI_I LTR Pao 2557 3187 -4776 1 748 2407 123 11 12 chrUextra 21458756 21459425 -7545231 + DMSAT6 Satellite Satellite 1 667 -97 1 748 945 0 0 27 chrUextra 21459527 21459639 -7545017 + NTS_DM Other Other 25 133 -107 1 748 1510 15 20 25 chrUextra 21459639 21459843 -7544813 + NTS_DM Other Other 38 240 0 1 748 1854 21 17 17 chrUextra 21459843 21460083 -7544573 + NTS_DM Other Other 1 240 0 1 748 1014 9 0 0 chrUextra 21460083 21460194 -7544462 + NTS_DM Other Other 1 111 -129 1 748 3310 167 12 8 chrUextra 21460294 21460963 -7543693 - SAR_DM Satellite Satellite -446 1026 355 1 748 1549 6 0 0 chrUextra 21461958 21462128 -7542528 - Copia2_LTR_DM LTR Copia 0 198 29 1 748 3347 13 5 0 chrUextra 21462128 21462500 -7542156 - Invader1_LTR LTR Gypsy 0 423 50 1 748 5965 22 0 0 chrUextra 21462601 21463270 -7541386 - MAX_I LTR Pao -5404 2510 1842 1 748 384 261 114 96 chrUextra 21464175 21464455 -7540201 + Invader1_LTR LTR Gypsy 84 368 -55 1 748 492 134 42 59 chrUextra 21464957 21465076 -7539580 - NTS_DM Other Other -120 120 4 1 748 1388 6 0 18 chrUextra 21465186 21465351 -7539305 - NTS_DM Other Other -78 162 1 1 748 1845 5 18 13 chrUextra 21465351 21465577 -7539079 - NTS_DM Other Other 0 240 14 1 748 1956 0 13 5 chrUextra 21466446 21466670 -7537986 - R1_DM LINE R1 -5130 226 1 1 748 260 30 30 0 chrUextra 21466670 21466703 -7537953 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 1 748 3903 0 0 0 chrUextra 21466698 21467115 -7537541 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2237 1 748 5995 15 0 5 chrUextra 21467215 21467883 -7536773 + Gypsy4_I LTR Gypsy 633 1297 -4991 1 748 462 178 65 0 chrUextra 21468232 21468339 -7536317 + DNAREP1_DM LINE Penelope 182 295 -299 1 748 1152 44 0 0 chrUextra 21468516 21468653 -7536003 + Baggins1 LINE LOA 2099 2235 -3218 1 748 42 20 0 0 chrUextra 21468753 21468802 -7535854 + AT_rich Low_complexity Low_complexity 1 49 0 1 748 208 200 31 0 chrUextra 21469317 21469382 -7535274 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 748 3724 110 27 26 chrUextra 21470294 21470959 -7533697 - TART LINE telomeric -4690 9787 9122 1 748 6140 6 0 0 chrUextra 21471060 21471729 -7532927 + R1_DM LINE R1 4600 5268 -88 1 748 9726 226 47 43 chrUextra 21471829 21474036 -7530620 + R1_DM LINE R1 381 2595 -2761 1 748 5994 15 0 0 chrUextra 21474136 21474805 -7529851 - DMRT1B LINE R1 -3255 1928 1260 1 748 1524 12 0 0 chrUextra 21474905 21475148 -7529508 + (TATAA)n Simple_repeat Simple_repeat 1 243 0 1 748 3965 2 0 0 chrUextra 21475150 21475574 -7529082 + ROO_LTR LTR Pao 1 424 -4 1 748 679 271 35 29 chrUextra 21475691 21476006 -7528650 + XDMR Unknown Unknown 39 355 -6 1 748 632 308 50 48 chrUextra 21475717 21476341 -7528315 - SAR_DM Satellite Satellite -464 1008 384 1 748 662 14 0 0 chrUextra 21476443 21476516 -7528140 + DM297_I LTR Gypsy 6095 6167 0 1 748 3605 5 7 7 chrUextra 21476516 21476930 -7527726 + DM297_LTR LTR Gypsy 1 414 0 1 748 28 0 0 0 chrUextra 21476930 21476958 -7527698 + AT_rich Low_complexity Low_complexity 1 28 0 1 748 2889 6 0 0 chrUextra 21477212 21477529 -7527127 - STALKER4_LTR LTR Gypsy -85 317 1 1 748 2697 0 3 26 chrUextra 21477529 21477881 -7526775 - STALKER4_I LTR Gypsy 0 6530 6187 1 748 2898 185 8 8 chrUextra 21477981 21478592 -7526064 - SAR_DM Satellite Satellite -598 874 264 1 748 374 0 0 23 chrUextra 21478606 21478650 -7526006 - STALKER4_LTR LTR Gypsy 0 402 360 1 748 259 122 0 0 chrUextra 21478750 21478791 -7525865 - NTS_DM Other Other -196 44 4 1 748 1388 6 0 18 chrUextra 21478901 21479066 -7525590 - NTS_DM Other Other -78 162 1 1 748 1955 8 17 13 chrUextra 21479066 21479305 -7525351 - NTS_DM Other Other 0 240 1 1 748 814 0 35 26 chrUextra 21479305 21479419 -7525237 - NTS_DM Other Other 0 240 126 1 748 272 130 0 0 chrUextra 21479519 21479565 -7525091 - ARS406_DM Unknown Unknown -307 46 1 1 748 2389 176 61 19 chrUextra 21479524 21480177 -7524479 + SAR_DM Satellite Satellite 1 679 -203 1 748 6070 5 0 0 chrUextra 21480288 21480957 -7523699 + DM176_I LTR Gypsy 3967 4635 -1785 1 748 5590 29 1 12 chrUextra 21481057 21481726 -7522930 - NINJA_I LTR Pao -3842 2169 1508 1 748 2737 181 35 32 chrUextra 21481826 21482487 -7522169 + SAR_DM Satellite Satellite 496 1158 -314 1 748 5433 3 1 69 chrUextra 21482595 21483264 -7521392 - LSU-rRNA_Dme rRNA rRNA -1552 2348 1725 1 748 6195 5 0 0 chrUextra 21483364 21484033 -7520623 + BS2 LINE Jockey 3666 4334 -387 1 748 22 35 0 0 chrUextra 21484312 21484341 -7520315 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chrUextra 21484442 21484493 -7520163 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 5816 1 0 0 chrUextra 21485671 21486340 -7518316 - DM297_I LTR Gypsy -4623 1544 876 1 748 2529 100 28 30 chrUextra 21486440 21487109 -7517547 + DMSAT6 Satellite Satellite 1 667 0 1 748 5853 19 1 3 chrUextra 21487978 21488647 -7516009 + R1_DM LINE R1 3757 4424 -932 1 748 2599 92 38 20 chrUextra 21488747 21489411 -7515245 - DMSAT6 Satellite Satellite -5 675 1 1 748 604 191 21 29 chrUextra 21489516 21489656 -7515000 + HETRP_DM Satellite Satellite 1544 1682 -190 1 748 712 186 7 14 chrUextra 21489805 21489947 -7514709 + HETRP_DM Satellite Satellite 1529 1669 -203 1 748 192 40 0 0 chrUextra 21490078 21490103 -7514553 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 748 318 238 0 24 chrUextra 21490103 21490185 -7514471 + HETRP_DM Satellite Satellite 1549 1628 -244 1 748 1914 256 36 38 chrUextra 21490294 21490952 -7513704 + ROVER-I_DM LTR Gypsy 1305 1961 -4623 1 748 3140 181 6 6 chrUextra 21491056 21491707 -7512949 - SAR_DM Satellite Satellite -641 831 181 1 748 758 123 0 0 chrUextra 21491601 21491723 -7512933 + ARS406_DM Unknown Unknown 1 122 -231 1 748 4642 79 142 14 chrUextra 21491823 21492492 -7512164 - Gypsy12_I LTR Gypsy -73 5473 4719 1 748 3034 98 183 14 chrUextra 21492592 21493111 -7511545 + TART LINE telomeric 7233 7839 -6638 1 748 717 100 36 0 chrUextra 21493114 21493224 -7511432 + TART LINE telomeric 10224 10337 -4140 1 748 230 73 73 0 chrUextra 21493220 21493261 -7511395 + TAHRE LINE telomeric 10186 10229 -234 1 748 2378 190 9 4 chrUextra 21493361 21494026 -7510630 - SAR_DM Satellite Satellite -703 667 1 1 748 5768 35 8 5 chrUextra 21494130 21494798 -7509858 - BATUMI_I LTR Pao -2032 5931 5262 1 748 1889 0 0 0 chrUextra 21494898 21495103 -7509553 - LSU-rRNA_Dme rRNA rRNA -3695 205 1 1 748 21 95 0 0 chrUextra 21495115 21495178 -7509478 + AT_rich Low_complexity Low_complexity 1 63 0 1 748 34 24 0 0 chrUextra 21495391 21495432 -7509224 + AT_rich Low_complexity Low_complexity 1 41 0 1 93 5430 39 3 2 chrUextra 21495693 21496334 -7508322 + R1_DM LINE R1 1101 1742 -3614 1 749 1599 6 0 0 chrUextra 21496441 21496621 -7508035 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 749 980 56 3 18 chrUextra 21497212 21497870 -7506786 + RSP Satellite Satellite 1 648 0 1 749 2478 209 30 15 chrUextra 21497970 21498636 -7506020 + SAR_DM Satellite Satellite 438 1113 -359 1 749 4556 2 0 0 chrUextra 21498738 21499229 -7505427 + LSU-rRNA_Dme rRNA rRNA 2087 2577 -1323 1 749 1660 0 6 0 chrUextra 21499227 21499406 -7505250 + R2_DM LINE R2 2257 2436 -1171 1 749 4065 24 2 2 chrUextra 21499507 21500000 -7504656 - ROO_I LTR Pao -219 8037 7545 1 749 523 71 29 0 chrUextra 21500000 21500070 -7504586 - ROO_I LTR Pao -712 7544 7473 1 749 778 0 0 0 chrUextra 21500081 21500174 -7504482 - ROO_I LTR Pao -1354 6902 6810 1 749 2834 188 11 15 chrUextra 21500274 21500942 -7503714 - SAR_DM Satellite Satellite -505 967 303 1 749 3278 158 19 9 chrUextra 21501044 21501710 -7502946 - SAR_DM Satellite Satellite -416 1056 384 1 749 459 36 0 0 chrUextra 21501887 21501942 -7502714 - CIRCE LINE Composite -1371 4985 4931 1 749 4614 22 2 0 chrUextra 21501942 21502478 -7502178 + R1_DM LINE R1 2277 2813 -2543 1 749 1295 275 28 35 chrUextra 21502578 21503241 -7501415 + SAR_DM Satellite Satellite 194 1126 -346 1 749 3328 165 11 8 chrUextra 21503346 21504012 -7500644 + SAR_DM Satellite Satellite 341 1008 -464 1 749 689 117 0 0 chrUextra 21504114 21504225 -7500431 - ARS406_DM Unknown Unknown -242 111 1 1 749 2523 177 39 8 chrUextra 21504132 21504782 -7499874 + SAR_DM Satellite Satellite 1 670 -677 1 749 316 191 23 0 chrUextra 21505084 21505163 -7499493 + PROTOP_A DNA P 43 124 -981 1 749 21 0 0 0 chrUextra 21505258 21505279 -7499377 + AT_rich Low_complexity Low_complexity 1 21 0 1 749 555 90 0 196 chrUextra 21505365 21505503 -7499153 - DNAREP1_DM LINE Penelope -9 585 475 1 749 3153 181 15 6 chrUextra 21505650 21506318 -7498338 - SAR_DM Satellite Satellite -543 929 256 1 749 372 49 65 16 chrUextra 21506447 21506509 -7498147 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 749 963 168 102 19 chrUextra 21506508 21506714 -7497942 - DMLTR5 LTR Gypsy 0 266 44 1 749 6060 6 0 0 chrUextra 21507186 21507854 -7496802 + Copia2_I LTR Copia 2827 3494 -668 1 749 6093 0 1 0 chrUextra 21507954 21508622 -7496034 - LSU-rRNA_Dme rRNA rRNA -527 3373 2705 1 749 3118 9 0 0 chrUextra 21508722 21509071 -7495585 - STALKER4_LTR LTR Gypsy -53 349 1 1 749 2231 26 13 22 chrUextra 21509071 21509389 -7495267 - STALKER4_I LTR Gypsy 0 6530 6216 1 749 3336 166 8 8 chrUextra 21509492 21510158 -7494498 + SAR_DM Satellite Satellite 377 1042 -430 1 749 572 0 48 36 chrUextra 21510258 21510341 -7494315 + NTS_DM Other Other 157 240 0 1 749 1355 6 0 18 chrUextra 21510341 21510506 -7494150 + NTS_DM Other Other 1 162 -78 1 749 514 119 36 0 chrUextra 21510616 21510700 -7493956 + NTS_DM Other Other 4 90 -150 1 749 5598 5 6 3 chrUextra 21511794 21512437 -7492219 + LSU-rRNA_Dme rRNA rRNA 1144 1788 -2112 1 749 5864 3 1 6 chrUextra 21512562 21513230 -7491426 - LSU-rRNA_Dme rRNA rRNA -2456 1444 780 1 749 5503 9 3 3 chrUextra 21513330 21513998 -7490658 + BLOOD_I LTR Gypsy 5802 6469 -144 1 749 1798 17 21 17 chrUextra 21514114 21514353 -7490303 - NTS_DM Other Other 0 240 1 1 749 1811 21 17 17 chrUextra 21514353 21514593 -7490063 - NTS_DM Other Other 0 240 1 1 749 1092 24 23 35 chrUextra 21514593 21514766 -7489890 - NTS_DM Other Other 0 240 70 1 749 5059 2 5 7 chrUextra 21515634 21516215 -7488441 + LSU-rRNA_Dme rRNA rRNA 1209 1788 -2112 1 749 391 0 0 0 chrUextra 21516259 21516302 -7488354 + LSU-rRNA_Dme rRNA rRNA 1788 1830 -2070 1 749 3084 181 11 9 chrUextra 21516402 21517069 -7487587 + SAR_DM Satellite Satellite 195 862 -610 1 749 2269 191 112 16 chrUextra 21517172 21517812 -7486844 + TAHRE LINE telomeric 7579 8280 -2183 1 749 411 0 0 0 chrUextra 21517938 21517983 -7486673 - NTS_DM Other Other -158 82 38 1 749 907 9 0 27 chrUextra 21517983 21518095 -7486561 - NTS_DM Other Other -107 133 25 1 749 1304 18 0 6 chrUextra 21518148 21518313 -7486343 - NTS_DM Other Other -39 201 38 1 749 907 9 0 27 chrUextra 21518313 21518425 -7486231 - NTS_DM Other Other -107 133 25 1 749 22 56 0 0 chrUextra 21518451 21518487 -7486169 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 269 125 0 0 chrUextra 21518500 21518540 -7486116 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 749 4697 24 0 2 chrUextra 21518706 21519255 -7485401 + R1_DM LINE R1 2323 2870 -2486 1 749 896 34 136 0 chrUextra 21519256 21519374 -7485282 + R1_DM LINE R1 3195 3328 -2028 1 749 5938 1 0 0 chrUextra 21519474 21520120 -7484536 + BEL_I LTR Pao 4759 5404 0 1 749 3144 177 11 6 chrUextra 21520245 21520909 -7483747 - SAR_DM Satellite Satellite -569 903 237 1 749 307 252 103 0 chrUextra 21521023 21521130 -7483526 + GTWIN_LTR LTR Gypsy 288 405 -90 1 749 26 88 0 0 chrUextra 21521408 21521476 -7483180 + AT_rich Low_complexity Low_complexity 1 68 0 1 749 23 0 0 0 chrUextra 21521518 21521541 -7483115 + AT_rich Low_complexity Low_complexity 1 23 0 1 749 5552 28 14 1 chrUextra 21521778 21522446 -7482210 + R1_DM LINE R1 2932 3607 -1749 1 749 2783 181 69 11 chrUextra 21522546 21523212 -7481444 - SAR_DM Satellite Satellite -460 1012 308 1 749 687 341 23 23 chrUextra 21523506 21523947 -7480709 + Gypsy6_I LTR Gypsy 2765 3205 -3807 1 749 1597 283 32 19 chrUextra 21524851 21525421 -7479235 - ROVER-I_DM LTR Gypsy -5158 1426 850 1 749 547 53 0 0 chrUextra 21525442 21525518 -7479138 - LOOPER1_DM DNA PiggyBac -1529 352 277 1 749 5974 0 0 1 chrUextra 21525621 21526286 -7478370 + R1_DM LINE R1 2702 3365 -1991 1 749 1518 12 0 0 chrUextra 21527154 21527323 -7477333 + R1_DM LINE R1 5188 5356 0 1 749 3533 71 4 4 chrUextra 21527356 21527822 -7476834 + R1_DM LINE R1 1 466 -4890 1 749 2864 191 16 24 chrUextra 21527922 21528590 -7476066 + SAR_DM Satellite Satellite 1 662 -203 1 749 3491 22 0 0 chrUextra 21528690 21529097 -7475559 - STALKER4_I LTR Gypsy -1714 4816 4410 1 749 2293 15 19 0 chrUextra 21529094 21529358 -7475298 - STALKER4_I LTR Gypsy -2233 4297 4029 1 749 3918 7 2 4 chrUextra 21529461 21529924 -7474732 + DOC LINE Jockey 4260 4721 -4 1 749 235 0 0 0 chrUextra 21529924 21529950 -7474706 - ROO_I LTR Pao -4037 4219 4194 1 749 976 25 0 0 chrUextra 21529960 21530078 -7474578 + FW_DM LINE Jockey 1750 1867 -2825 1 749 3704 181 5 0 chrUextra 21530229 21530892 -7473764 + ROVER-I_DM LTR Gypsy 3639 4304 -2280 1 749 5666 30 0 0 chrUextra 21530994 21531662 -7472994 - R1_DM LINE R1 -2430 2926 2259 1 749 3168 176 8 12 chrUextra 21531765 21532430 -7472226 - SAR_DM Satellite Satellite -549 923 262 1 749 4671 59 73 3 chrUextra 21532530 21533198 -7471458 + I_DM LINE I 115 829 -5402 1 749 3246 178 9 6 chrUextra 21533300 21533966 -7470690 - SAR_DM Satellite Satellite -549 923 256 1 749 530 103 308 0 chrUextra 21534068 21534185 -7470471 - FB4_DM DNA Tc1 -3934 155 3 1 749 4622 43 66 14 chrUextra 21534836 21535491 -7469165 + QUASIMODO_I LTR Gypsy 4341 5029 -1031 1 749 5733 0 0 0 chrUextra 21535621 21536270 -7468386 + LSU-rRNA_Dme rRNA rRNA 243 891 -3009 1 749 1465 167 35 23 chrUextra 21537138 21537498 -7467158 + Invader4_I LTR Gypsy 849 1210 -1976 1 749 2606 34 3 0 chrUextra 21537482 21537806 -7466850 + Invader4_I LTR Gypsy 1021 1345 -1068 1 749 5823 14 0 1 chrUextra 21537907 21538574 -7466082 + DOC2_DM LINE Jockey 3911 4576 -217 1 749 3913 7 2 2 chrUextra 21538674 21539126 -7465530 - ACCORD2_I LTR Gypsy -905 6307 5856 1 749 1881 18 0 0 chrUextra 21539124 21539342 -7465314 - ACCORD2_I LTR Gypsy -769 6443 6226 1 749 794 0 11 0 chrUextra 21539442 21539535 -7465121 + NTS_DM Other Other 40 133 -107 1 749 1472 20 20 20 chrUextra 21539535 21539738 -7464918 + NTS_DM Other Other 38 240 0 1 749 1785 25 17 17 chrUextra 21539738 21539978 -7464678 + NTS_DM Other Other 1 240 0 1 749 1169 8 0 0 chrUextra 21539978 21540110 -7464546 + NTS_DM Other Other 1 132 -108 1 749 1599 19 0 0 chrUextra 21540210 21540639 -7464017 + (TCTTG)n Simple_repeat Simple_repeat 1 429 0 1 749 342 0 0 0 chrUextra 21540639 21540677 -7463979 + (CATGT)n Simple_repeat Simple_repeat 2 39 0 1 749 1500 20 0 0 chrUextra 21540677 21540878 -7463778 + (TCTTG)n Simple_repeat Simple_repeat 1 201 0 1 749 4071 2 0 0 chrUextra 21540978 21541430 -7463226 - R1_DM LINE R1 -1911 3445 2994 1 749 1971 0 0 5 chrUextra 21541428 21541646 -7463010 - LSU-rRNA_Dme rRNA rRNA -1254 2646 2430 1 749 5606 15 6 1 chrUextra 21541754 21542414 -7462242 - PROTOP DNA P 0 4480 3818 1 749 870 20 0 0 chrUextra 21542514 21542616 -7462040 - R1_DM LINE R1 -547 4809 4708 1 749 5177 2 0 0 chrUextra 21542614 21543182 -7461474 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2084 1 749 5717 24 6 0 chrUextra 21543282 21543950 -7460706 - FW_DM LINE Jockey -774 3918 3247 1 749 1760 174 15 8 chrUextra 21544050 21544717 -7459939 - SAR_DM Satellite Satellite -684 672 1 1 749 316 27 0 0 chrUextra 21544818 21544855 -7459801 - DOC LINE Jockey -4685 40 4 1 749 277 106 0 21 chrUextra 21544875 21544923 -7459733 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 749 775 73 0 0 chrUextra 21545596 21545705 -7458951 + IDEFIX_I LTR Gypsy 4442 4550 -1078 1 749 3459 67 114 7 chrUextra 21545709 21546254 -7458402 + IDEFIX_I LTR Gypsy 4794 5396 -232 1 749 467 117 106 0 chrUextra 21546354 21546448 -7458208 - ARS406_DM Unknown Unknown -248 105 2 1 749 2955 182 32 6 chrUextra 21546364 21547022 -7457634 + SAR_DM Satellite Satellite 195 869 -603 1 749 363 216 0 0 chrUextra 21547122 21547233 -7457423 + (CTATT)n Simple_repeat Simple_repeat 2 112 0 1 749 2697 21 67 0 chrUextra 21547234 21547415 -7457241 + Stalker3_LTR LTR Gypsy 21 201 -171 1 749 207 0 0 0 chrUextra 21547415 21547438 -7457218 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 1 749 2697 21 67 0 chrUextra 21547438 21547586 -7457070 + Stalker3_LTR LTR Gypsy 202 370 -2 1 749 268 78 75 38 chrUextra 21547586 21547639 -7457017 + Stalker2_I LTR Gypsy 1 55 -7347 1 749 4827 16 0 0 chrUextra 21547893 21548449 -7456207 + G2_DM LINE Jockey 2547 3102 0 1 749 6004 0 1 5 chrUextra 21548658 21549326 -7455330 - SSU-rRNA_Dme rRNA rRNA -88 1907 1242 1 749 489 110 0 0 chrUextra 21549426 21549499 -7455157 + (TATG)n Simple_repeat Simple_repeat 3 75 0 1 749 2192 19 7 11 chrUextra 21549499 21549771 -7454885 + BLASTOPIA_LTR LTR Gypsy 5 275 0 1 749 2853 0 3 0 chrUextra 21549771 21550094 -7454562 + BLASTOPIA_I LTR Gypsy 1 324 -4157 1 749 5792 1 0 3 chrUextra 21550194 21550862 -7453794 + ROO_I LTR Pao 4319 4984 -3272 1 749 3147 179 9 8 chrUextra 21550967 21551630 -7453026 - SAR_DM Satellite Satellite -418 1054 391 1 749 3095 163 15 12 chrUextra 21551739 21552398 -7452258 + SAR_DM Satellite Satellite 326 986 -486 1 749 3190 63 75 0 chrUextra 21552501 21552943 -7451713 - R1-2_DM LINE R1 -2688 528 54 1 749 242 122 24 0 chrUextra 21553425 21553466 -7451190 + PROTOP DNA P 874 915 -3565 1 749 488 176 392 0 chrUextra 21553465 21553674 -7450982 + PROTOP DNA P 3959 4248 -232 1 749 1355 6 0 18 chrUextra 21554071 21554236 -7450420 - NTS_DM Other Other -78 162 1 1 749 1926 4 17 13 chrUextra 21554236 21554475 -7450181 - NTS_DM Other Other 0 240 1 1 749 1801 0 22 13 chrUextra 21554475 21554702 -7449954 - NTS_DM Other Other 0 240 12 1 749 6024 0 0 0 chrUextra 21554802 21555470 -7449186 + ACCORD2_I LTR Gypsy 2357 3024 -4188 1 749 3705 35 0 8 chrUextra 21555570 21556057 -7448599 + ROO_I LTR Pao 7774 8256 0 1 749 1546 22 0 0 chrUextra 21556057 21556238 -7448418 + ROO_LTR LTR Pao 1 181 -247 1 749 4428 2 0 0 chrUextra 21556338 21556848 -7447808 - NOMAD_LTR LTR Gypsy -8 510 1 1 749 2984 118 61 30 chrUextra 21557139 21557774 -7446882 - TART LINE telomeric -4425 10052 9398 1 749 5395 30 3 0 chrUextra 21557874 21558542 -7446114 + R1_DM LINE R1 1821 2490 -2866 1 749 5631 1 6 3 chrUextra 21558642 21559310 -7445346 - LSU-rRNA_Dme rRNA rRNA -2184 1716 1047 1 749 24 0 0 0 chrUextra 21559470 21559494 -7445162 + AT_rich Low_complexity Low_complexity 1 24 0 1 749 2066 34 4 0 chrUextra 21559807 21560074 -7444582 + IDEFIX_I LTR Gypsy 1 268 -5360 1 749 2937 171 9 9 chrUextra 21560195 21560846 -7443810 + SAR_DM Satellite Satellite 326 976 -496 1 749 3931 29 29 4 chrUextra 21561090 21561614 -7443042 - IDEFIX_LTR LTR Gypsy 0 594 58 1 749 5713 0 3 3 chrUextra 21561716 21562382 -7442274 - SSU-rRNA_Dme rRNA rRNA -511 1484 819 1 749 2974 177 9 9 chrUextra 21562482 21563149 -7441507 + SAR_DM Satellite Satellite 402 1068 -404 1 749 2914 180 14 6 chrUextra 21563250 21563914 -7440742 + SAR_DM Satellite Satellite 408 1076 -396 1 749 5798 1 0 3 chrUextra 21564018 21564686 -7439970 + SSU-rRNA_Dme rRNA rRNA 181 846 -1149 1 749 1557 84 152 0 chrUextra 21564786 21565036 -7439620 - Gypsy12_I LTR Gypsy -864 4682 4395 1 749 2294 118 4 32 chrUextra 21565020 21565454 -7439202 - Gypsy12_I LTR Gypsy -4853 693 214 1 749 2745 187 11 15 chrUextra 21565554 21566222 -7438434 + SAR_DM Satellite Satellite 205 869 -603 1 749 4613 72 1 1 chrUextra 21566322 21566989 -7437667 + BATUMI_I LTR Pao 3765 4507 -3407 1 749 2861 172 11 11 chrUextra 21567090 21567746 -7436910 + SAR_DM Satellite Satellite 421 1076 -396 1 749 5717 5 0 0 chrUextra 21567858 21568526 -7436130 + Invader2_I LTR Gypsy 611 1278 -3314 1 749 975 9 0 0 chrUextra 21568626 21568738 -7435918 + (TTGTG)n Simple_repeat Simple_repeat 4 115 0 1 749 4751 4 0 0 chrUextra 21568746 21569294 -7435362 - DMRT1B LINE R1 0 5183 4636 1 749 285 282 107 89 chrUextra 21569492 21569772 -7434884 - Invader1_LTR LTR Gypsy -55 368 84 1 749 352 177 0 25 chrUextra 21569981 21570062 -7434594 + DMLTR5 LTR Gypsy 44 122 -144 1 749 4920 45 39 0 chrUextra 21570162 21570830 -7433826 + TART LINE telomeric 2087 2780 -11697 1 749 5554 0 39 1 chrUextra 21570931 21571598 -7433058 + DOC LINE Jockey 1246 1937 -2788 1 749 5788 8 0 0 chrUextra 21571698 21572365 -7432291 - Invader1_I LTR Gypsy -1873 1313 647 1 749 5472 9 1 6 chrUextra 21572466 21573134 -7431522 + FW_DM LINE Jockey 1440 2104 -2588 1 749 5624 5 0 0 chrUextra 21573234 21573902 -7430754 - IDEFIX_I LTR Gypsy -2848 2780 2113 1 749 3119 160 9 11 chrUextra 21574002 21574670 -7429986 - SAR_DM Satellite Satellite -435 1037 371 1 749 2375 103 14 23 chrUextra 21574770 21575438 -7429218 - DMSAT6 Satellite Satellite -174 661 1 1 749 5499 21 1 0 chrUextra 21575538 21576206 -7428450 - R1_DM LINE R1 -2842 2514 1846 1 749 1712 162 38 44 chrUextra 21576306 21576974 -7427682 + TAHRE LINE telomeric 10117 10460 -3 1 749 5794 0 0 1 chrUextra 21577074 21577742 -7426914 - ROO_I LTR Pao -615 7641 6975 1 749 2667 164 28 39 chrUextra 21577842 21578510 -7426146 - SAR_DM Satellite Satellite -1083 660 1 1 749 2902 220 55 1 chrUextra 21578610 21579278 -7425378 - Gypsy6_I LTR Gypsy -2139 4873 4170 1 749 1327 59 24 42 chrUextra 21579378 21579590 -7425066 - Gypsy12_I LTR Gypsy -5338 208 1 1 749 878 192 147 34 chrUextra 21579604 21580036 -7424620 - Gypsy12_LTR LTR Gypsy -553 1727 1267 1 749 2916 174 9 11 chrUextra 21580150 21580812 -7423844 - SAR_DM Satellite Satellite -620 852 192 1 749 5451 19 16 0 chrUextra 21580914 21581582 -7423074 - R1_DM LINE R1 -3127 2229 1551 1 749 5741 0 3 3 chrUextra 21581682 21582350 -7422306 - SSU-rRNA_Dme rRNA rRNA -319 1676 1009 1 749 5650 3 0 0 chrUextra 21582450 21583118 -7421538 + DMRT1B LINE R1 359 1026 -4157 1 749 5579 6 1 0 chrUextra 21583218 21583886 -7420770 + Invader3_I LTR Gypsy 3964 4632 -256 1 749 3034 172 9 11 chrUextra 21583986 21584654 -7420002 + SAR_DM Satellite Satellite 348 1014 -458 1 749 3336 21 0 12 chrUextra 21584755 21585185 -7419471 - DM176_I LTR Gypsy -5995 425 1 1 749 1006 24 0 0 chrUextra 21585185 21585310 -7419346 - DM176_LTR LTR Gypsy 0 507 383 1 749 21 89 0 0 chrUextra 21585340 21585396 -7419260 + AT_rich Low_complexity Low_complexity 1 56 0 1 749 4453 96 3 1 chrUextra 21585524 21586190 -7418466 - S_DM DNA Tc1 -285 1451 785 1 749 3107 163 11 9 chrUextra 21586290 21586958 -7417698 + SAR_DM Satellite Satellite 376 1044 -428 1 749 3923 91 27 31 chrUextra 21587058 21587726 -7416930 + Gypsy10_I LTR Gypsy 394 1058 -4220 1 749 5765 0 1 3 chrUextra 21587826 21588494 -7416162 + SSU-rRNA_Dme rRNA rRNA 352 1018 -977 1 749 2957 172 12 9 chrUextra 21588597 21589260 -7415396 - SAR_DM Satellite Satellite -549 923 259 1 749 5850 1 0 0 chrUextra 21589362 21590030 -7414626 - SSU-rRNA_Dme rRNA rRNA -947 1048 381 1 749 2936 170 11 9 chrUextra 21590130 21590783 -7413873 + SAR_DM Satellite Satellite 284 937 -535 1 749 996 58 0 0 chrUextra 21590660 21590798 -7413858 - ARS406_DM Unknown Unknown -164 189 52 1 749 5708 3 0 0 chrUextra 21590898 21591566 -7413090 - Invader3_I LTR Gypsy -1082 3806 3139 1 749 2096 123 6 52 chrUextra 21591667 21592323 -7412333 - DMSAT6 Satellite Satellite -41 626 1 1 749 5220 18 25 1 chrUextra 21592434 21593102 -7411554 - STALKER4_I LTR Gypsy -2990 3540 2857 1 749 2835 176 6 19 chrUextra 21593202 21593869 -7410787 + SAR_DM Satellite Satellite 419 1076 -396 1 749 1252 18 0 6 chrUextra 21593989 21594154 -7410502 - NTS_DM Other Other -39 201 38 1 749 870 9 0 27 chrUextra 21594154 21594266 -7410390 - NTS_DM Other Other -107 133 25 1 749 1252 18 0 6 chrUextra 21594318 21594483 -7410173 - NTS_DM Other Other -39 201 38 1 749 843 18 0 27 chrUextra 21594483 21594595 -7410061 - NTS_DM Other Other -107 133 25 1 749 642 75 0 0 chrUextra 21594738 21594832 -7409824 + CIRCE LINE Composite 4284 4377 -1979 1 749 388 100 14 28 chrUextra 21594832 21594895 -7409761 - DMTOM1_LTR LTR Gypsy 0 410 349 1 749 543 156 40 16 chrUextra 21594895 21595019 -7409637 - DMTOM1_LTR LTR Gypsy 0 410 284 1 749 254 190 17 0 chrUextra 21595036 21595094 -7409562 - DM176_LTR LTR Gypsy -141 366 308 1 749 1006 52 24 83 chrUextra 21595238 21595406 -7409250 + CIRCE LINE Composite 4371 4528 -1828 1 749 1795 30 0 4 chrUextra 21595529 21595767 -7408889 + BATUMI_I LTR Pao 7303 7539 -424 1 749 1039 8 0 23 chrUextra 21595766 21595895 -7408761 + BATUMI_I LTR Pao 7161 7286 -677 1 749 2011 46 1 1 chrUextra 21595885 21596174 -7408482 + G_DM LINE Jockey 622 908 -1134 1 749 5614 5 1 1 chrUextra 21596274 21596942 -7407714 + R1_DM LINE R1 2639 3306 -2050 1 749 4393 33 65 10 chrUextra 21597042 21597646 -7407010 - PROTOP DNA P -3843 637 1 1 749 5763 3 0 0 chrUextra 21597810 21598478 -7406178 + DMRT1A LINE R1 2735 3402 -1781 1 749 3567 0 0 55 chrUextra 21598578 21599034 -7405622 - LSU-rRNA_Dme rRNA rRNA -3469 431 1 1 749 21 95 0 0 chrUextra 21599046 21599109 -7405547 + AT_rich Low_complexity Low_complexity 1 63 0 1 749 5530 22 0 0 chrUextra 21599346 21600014 -7404642 - R1_DM LINE R1 -1549 3807 3140 1 749 2939 187 8 5 chrUextra 21600116 21600782 -7403874 - SAR_DM Satellite Satellite -549 923 256 1 749 1644 0 0 5 chrUextra 21600882 21601075 -7403581 - ROO_LTR LTR Pao -236 192 1 1 749 4015 19 0 2 chrUextra 21601075 21601550 -7403106 + BEL_I LTR Pao 139 612 -4792 1 749 696 12 0 0 chrUextra 21601650 21601732 -7402924 - Invader4_LTR LTR Gypsy -264 82 1 1 749 4876 5 5 0 chrUextra 21601732 21602318 -7402338 - Invader4_I LTR Gypsy 0 2413 1825 1 749 734 32 0 11 chrUextra 21602418 21602513 -7402143 - NTS_DM Other Other -146 94 1 1 749 1734 21 17 17 chrUextra 21602513 21602753 -7401903 - NTS_DM Other Other 0 240 1 1 749 1726 17 17 21 chrUextra 21602753 21602994 -7401662 - NTS_DM Other Other 0 240 1 1 749 533 23 43 43 chrUextra 21602994 21603086 -7401570 - NTS_DM Other Other 0 240 149 1 749 3392 58 176 0 chrUextra 21603186 21603795 -7400861 + MDG1_I LTR Gypsy 5881 6596 0 1 749 214 191 0 0 chrUextra 21603811 21603853 -7400803 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1 749 5804 0 0 0 chrUextra 21603954 21604621 -7400035 - DMRT1A LINE R1 -1445 3738 3072 1 749 416 32 0 16 chrUextra 21604722 21604786 -7399870 + NTS_DM Other Other 139 201 -39 1 749 870 9 0 27 chrUextra 21604838 21604950 -7399706 + NTS_DM Other Other 25 133 -107 1 749 1252 18 0 6 chrUextra 21604950 21605115 -7399541 + NTS_DM Other Other 38 201 -39 1 749 870 9 0 27 chrUextra 21605167 21605279 -7399377 + NTS_DM Other Other 25 133 -107 1 749 864 9 9 0 chrUextra 21605279 21605390 -7399266 + NTS_DM Other Other 38 149 -91 1 749 22 56 0 0 chrUextra 21605566 21605602 -7399054 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 27 29 0 0 chrUextra 21605666 21605700 -7398956 + AT_rich Low_complexity Low_complexity 1 34 0 1 749 246 150 0 0 chrUextra 21605705 21605745 -7398911 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 246 150 0 0 chrUextra 21605797 21605837 -7398819 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 246 150 0 0 chrUextra 21605889 21605929 -7398727 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 255 125 0 0 chrUextra 21605972 21606012 -7398644 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 22 56 0 0 chrUextra 21606025 21606061 -7398595 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 468 59 0 42 chrUextra 21606087 21606158 -7398498 + NTS_DM Other Other 25 92 -148 1 749 4691 100 0 0 chrUextra 21606258 21606926 -7397730 - GTWIN_I LTR Gypsy -1912 4509 3842 1 749 5450 21 3 1 chrUextra 21607026 21607694 -7396962 + DMCR1A LINE CR1 1950 2618 -1852 1 749 34 24 0 0 chrUextra 21607858 21607899 -7396757 + AT_rich Low_complexity Low_complexity 1 41 0 1 749 21 95 0 0 chrUextra 21608112 21608175 -7396481 + AT_rich Low_complexity Low_complexity 1 63 0 1 749 1994 0 0 91 chrUextra 21608187 21608462 -7396194 + LSU-rRNA_Dme rRNA rRNA 1 250 -3650 1 749 25 0 0 0 chrUextra 21609125 21609150 -7395506 + AT_rich Low_complexity Low_complexity 1 25 0 1 749 2540 264 0 0 chrUextra 21609334 21609996 -7394660 + Gypsy6_I LTR Gypsy 2403 3064 -3948 1 749 2907 184 6 8 chrUextra 21610102 21610763 -7393893 - SAR_DM Satellite Satellite -535 937 278 1 749 5937 1 0 3 chrUextra 21611630 21612297 -7392359 - R1_DM LINE R1 -3524 1832 1168 1 749 5638 6 1 1 chrUextra 21612397 21613064 -7391592 - IDEFIX_I LTR Gypsy -4561 1067 401 1 749 3170 105 16 21 chrUextra 21613164 21613689 -7390967 - DMRT1B LINE R1 -4829 354 1 1 749 5576 0 0 0 chrUextra 21613968 21614598 -7390058 + LSU-rRNA_Dme rRNA rRNA 218 847 -3053 1 749 1835 17 17 17 chrUextra 21614702 21614942 -7389714 - NTS_DM Other Other 0 240 1 1 749 1824 21 17 17 chrUextra 21614942 21615182 -7389474 - NTS_DM Other Other 0 240 1 1 749 1273 17 22 22 chrUextra 21615182 21615365 -7389291 - NTS_DM Other Other 0 240 58 1 749 3004 178 16 9 chrUextra 21615465 21616110 -7388546 - SAR_DM Satellite Satellite -629 843 195 1 749 666 114 9 9 chrUextra 21616017 21616132 -7388524 + ARS406_DM Unknown Unknown 1 115 -238 1 749 2063 181 25 6 chrUextra 21616237 21616899 -7387757 - SAR_DM Satellite Satellite -411 674 1 1 749 1929 186 16 3 chrUextra 21616999 21617632 -7387024 - SAR_DM Satellite Satellite -542 640 1 1 749 2880 184 9 21 chrUextra 21617766 21618433 -7386223 - SAR_DM Satellite Satellite -372 1100 442 1 749 5989 0 0 0 chrUextra 21618533 21619200 -7385456 - DOC LINE Jockey -3257 1468 802 1 749 41 0 0 0 chrUextra 21619300 21619341 -7385315 + AT_rich Low_complexity Low_complexity 1 41 0 1 749 245 125 46 15 chrUextra 21619853 21619918 -7384738 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 749 4979 2 0 0 chrUextra 21620067 21620643 -7384013 - I_DM LINE I -5556 675 100 1 749 765 22 0 0 chrUextra 21620643 21620734 -7383922 + (CTTAT)n Simple_repeat Simple_repeat 1 91 0 1 749 6015 1 0 0 chrUextra 21620834 21621501 -7383155 + ROO_I LTR Pao 5168 5834 -2422 1 749 3692 0 0 2 chrUextra 21621601 21622007 -7382649 - ROO_LTR LTR Pao -23 405 1 1 749 5735 12 6 0 chrUextra 21622368 21623035 -7381621 + STALKER4_I LTR Gypsy 1562 2232 -4298 1 749 1741 57 8 47 chrUextra 21623135 21623393 -7381263 - ROO_I LTR Pao -7895 361 114 1 749 3182 32 0 3 chrUextra 21623426 21623802 -7380854 - ROO_LTR LTR Pao 0 428 54 1 749 2823 10 0 0 chrUextra 21623902 21624216 -7380440 + TRANSPAC_LTR LTR Gypsy 17 330 0 1 749 3100 3 3 6 chrUextra 21624216 21624569 -7380087 + LSU-rRNA_Dme rRNA rRNA 1157 1508 -2392 1 749 2496 213 9 14 chrUextra 21624670 21625336 -7379320 - SAR_DM Satellite Satellite -396 1076 414 1 749 3005 184 8 14 chrUextra 21625436 21626103 -7378553 + SAR_DM Satellite Satellite 256 918 -554 1 749 5820 1 0 0 chrUextra 21626203 21626870 -7377786 - ROO_I LTR Pao -3034 5222 4556 1 750 5851 16 1 0 chrUextra 21626970 21627637 -7377019 + R1_DM LINE R1 4006 4673 -683 1 750 6053 1 1 0 chrUextra 21627737 21628404 -7376252 - LSU-rRNA_Dme rRNA rRNA -1436 2464 1797 1 750 3152 168 14 14 chrUextra 21628505 21629171 -7375485 + SAR_DM Satellite Satellite 195 860 -612 1 750 5544 5 0 1 chrUextra 21629271 21629938 -7374718 + DM176_I LTR Gypsy 5401 6066 -354 1 750 643 170 63 7 chrUextra 21630038 21630180 -7374476 - SAR_DM Satellite Satellite -417 1055 906 1 750 2273 174 16 16 chrUextra 21630195 21630704 -7373952 - SAR_DM Satellite Satellite -396 1076 568 1 750 6054 1 0 1 chrUextra 21630805 21631472 -7373184 + LSU-rRNA_Dme rRNA rRNA 2086 2751 -1149 1 750 1479 51 20 0 chrUextra 21631572 21631769 -7372887 - IDEFIX_LTR LTR Gypsy -393 201 1 1 750 1472 101 30 23 chrUextra 21631769 21632071 -7372585 + Invader2_I LTR Gypsy 3419 3793 -799 1 750 944 75 7 45 chrUextra 21632085 21632239 -7372417 + Invader2_I LTR Gypsy 3861 4008 -584 1 750 2225 106 0 45 chrUextra 21632397 21632773 -7371883 + Gypsy12_I LTR Gypsy 611 969 -4577 1 750 227 171 0 0 chrUextra 21632815 21632850 -7371806 + DM297_I LTR Gypsy 3424 3458 -2709 1 750 608 169 91 39 chrUextra 21632850 21633004 -7371652 + Gypsy12_LTR LTR Gypsy 1 162 -2174 1 750 2682 173 12 6 chrUextra 21633107 21633637 -7371019 - SAR_DM Satellite Satellite -587 669 26 1 750 890 60 0 0 chrUextra 21633637 21633754 -7370902 + ARS406_DM Unknown Unknown 73 189 -164 1 750 2682 173 12 6 chrUextra 21633754 21633773 -7370883 - SAR_DM Satellite Satellite -587 25 1 1 750 2545 117 12 28 chrUextra 21633891 21634539 -7370117 - DMSAT6 Satellite Satellite 0 637 1 1 750 561 0 49 37 chrUextra 21634640 21634722 -7369934 + NTS_DM Other Other 158 240 0 1 750 1811 21 17 17 chrUextra 21634722 21634962 -7369694 + NTS_DM Other Other 1 240 0 1 750 1835 17 17 17 chrUextra 21634962 21635202 -7369454 + NTS_DM Other Other 1 240 0 1 750 940 9 0 0 chrUextra 21635202 21635307 -7369349 + NTS_DM Other Other 1 105 -135 1 750 3087 182 8 8 chrUextra 21635407 21636073 -7368583 - SAR_DM Satellite Satellite -595 877 212 1 750 420 20 0 0 chrUextra 21636390 21636439 -7368217 + (TATTG)n Simple_repeat Simple_repeat 1 49 0 1 750 1152 67 0 37 chrUextra 21636441 21636628 -7368028 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 750 5873 1 33 1 chrUextra 21636941 21637608 -7367048 + IVK_DM LINE I 4329 5016 -386 1 750 2760 182 18 10 chrUextra 21637709 21638337 -7366319 - SAR_DM Satellite Satellite -645 827 195 1 750 884 92 0 8 chrUextra 21638243 21638375 -7366281 + ARS406_DM Unknown Unknown 1 131 -222 1 750 817 21 0 0 chrUextra 21638475 21638570 -7366086 + DMRT1B LINE R1 5089 5183 0 1 750 4452 35 13 2 chrUextra 21638550 21639095 -7365561 + DOC3_DM LINE Jockey 1751 2301 -2439 1 750 418 68 17 0 chrUextra 21639083 21639142 -7365514 + DOC3_DM LINE Jockey 2522 2581 -2159 1 750 2418 219 10 15 chrUextra 21639242 21639904 -7364752 - SAR_DM Satellite Satellite -1071 658 1 1 750 1482 29 19 24 chrUextra 21640009 21640219 -7364437 + NTS_DM Other Other 32 240 0 1 750 1801 30 17 17 chrUextra 21640219 21640459 -7364197 + NTS_DM Other Other 1 240 0 1 750 1609 33 19 5 chrUextra 21640459 21640671 -7363985 + NTS_DM Other Other 1 215 -25 1 750 5737 12 1 0 chrUextra 21640776 21641443 -7363213 + STALKER4_I LTR Gypsy 5051 5718 -812 1 750 6112 3 0 0 chrUextra 21641543 21642210 -7362446 + Invader1_I LTR Gypsy 20 686 -2500 1 750 3143 29 3 0 chrUextra 21642310 21642695 -7361961 - Invader2_I LTR Gypsy -444 4148 3763 1 750 2170 39 0 0 chrUextra 21642693 21642977 -7361679 - Invader2_I LTR Gypsy -1021 3571 3288 1 750 6001 0 1 3 chrUextra 21643078 21643744 -7360912 - SSU-rRNA_Dme rRNA rRNA -610 1385 721 1 750 882 80 0 0 chrUextra 21643845 21643970 -7360686 - ARS406_DM Unknown Unknown -228 125 1 1 750 2860 175 9 11 chrUextra 21643877 21644511 -7360145 + SAR_DM Satellite Satellite 195 827 -645 1 750 5878 8 0 0 chrUextra 21644611 21645278 -7359378 + DMRT1B LINE R1 567 1233 -3950 1 750 5966 3 1 3 chrUextra 21645378 21646045 -7358611 - SSU-rRNA_Dme rRNA rRNA -728 1267 602 1 750 5538 16 5 0 chrUextra 21646145 21646812 -7357844 - ROO_I LTR Pao -4161 4095 3426 1 750 5617 19 27 1 chrUextra 21646912 21647579 -7357077 + DMRT1B LINE R1 3544 4227 -956 1 750 4155 2 2 0 chrUextra 21647679 21648140 -7356516 + LSU-rRNA_Dme rRNA rRNA 2171 2632 -1268 1 750 1789 5 10 0 chrUextra 21648140 21648346 -7356310 + R1_DM LINE R1 1 208 -5148 1 750 1029 7 0 0 chrUextra 21648446 21648586 -7356070 + DOC LINE Jockey 4586 4725 0 1 750 180 0 0 0 chrUextra 21648600 21648620 -7356036 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 750 4107 26 0 4 chrUextra 21648620 21649113 -7355543 + DMRT1B LINE R1 163 653 -4530 1 750 34 24 0 0 chrUextra 21649832 21649873 -7354783 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 869 264 93 62 chrUextra 21649996 21650643 -7354013 + TABOR_I LTR Gypsy 2344 3528 -3369 1 750 2670 184 9 25 chrUextra 21650747 21651399 -7353257 + SAR_DM Satellite Satellite 477 1118 -354 1 750 345 151 43 65 chrUextra 21651322 21651414 -7353242 - XDMR_DM Unknown Unknown -9 351 262 1 750 1267 17 27 22 chrUextra 21651514 21651699 -7352957 + NTS_DM Other Other 55 240 0 1 750 1813 21 17 17 chrUextra 21651699 21651939 -7352717 + NTS_DM Other Other 1 240 0 1 750 1835 17 17 17 chrUextra 21651939 21652179 -7352477 + NTS_DM Other Other 1 240 0 1 750 2440 0 7 3 chrUextra 21652281 21652564 -7352092 + LSU-rRNA_Dme rRNA rRNA 1505 1788 -2112 1 750 3106 0 3 0 chrUextra 21652608 21652948 -7351708 + LSU-rRNA_Dme rRNA rRNA 1788 2128 -1772 1 750 5973 1 0 1 chrUextra 21653048 21653715 -7350941 - R1_DM LINE R1 -1786 3570 2905 1 750 5215 12 0 1 chrUextra 21653815 21654482 -7350174 - QUASIMODO_I LTR Gypsy -167 5893 5228 1 750 707 11 10 42 chrUextra 21654582 21654678 -7349978 - NTS_DM Other Other -123 117 25 1 750 21 57 0 0 chrUextra 21654704 21654739 -7349917 + AT_rich Low_complexity Low_complexity 1 35 0 1 750 1294 24 0 6 chrUextra 21654739 21654904 -7349752 - NTS_DM Other Other -39 201 38 1 750 900 9 0 27 chrUextra 21654905 21655016 -7349640 - NTS_DM Other Other -108 132 25 1 750 1304 18 0 6 chrUextra 21655068 21655233 -7349423 - NTS_DM Other Other -39 201 38 1 750 650 207 7 14 chrUextra 21655493 21655635 -7349021 + HETRP_DM Satellite Satellite 1529 1669 -203 1 750 180 0 0 0 chrUextra 21655766 21655786 -7348870 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 750 552 210 8 16 chrUextra 21655786 21655912 -7348744 + HETRP_DM Satellite Satellite 1540 1664 -208 1 750 3017 157 20 17 chrUextra 21656116 21656763 -7347893 - SAR_DM Satellite Satellite -498 974 326 1 750 2963 163 33 16 chrUextra 21656884 21657550 -7347106 - SAR_DM Satellite Satellite -500 972 296 1 750 5947 3 1 0 chrUextra 21657650 21658317 -7346339 + ROO_I LTR Pao 1937 2604 -5652 1 750 6110 1 0 0 chrUextra 21658417 21659084 -7345572 + LSU-rRNA_Dme rRNA rRNA 2828 3494 -406 1 750 5316 29 0 9 chrUextra 21659184 21659851 -7344805 - IDEFIX_I LTR Gypsy -2129 3499 2839 1 750 2318 165 33 14 chrUextra 21659967 21660476 -7344180 - SAR_DM Satellite Satellite -411 1061 543 1 750 466 244 0 0 chrUextra 21660487 21660618 -7344038 - SAR_DM Satellite Satellite -396 1076 946 1 750 24 85 0 0 chrUextra 21660729 21660788 -7343868 + AT_rich Low_complexity Low_complexity 1 59 0 1 750 21 89 0 0 chrUextra 21660826 21660882 -7343774 + AT_rich Low_complexity Low_complexity 1 56 0 1 750 5805 5 1 1 chrUextra 21661485 21662152 -7342504 - FW_DM LINE Jockey -1431 3261 2595 1 750 1175 126 5 23 chrUextra 21662259 21662478 -7342178 + TAHRE LINE telomeric 10239 10453 -10 1 750 1419 131 52 86 chrUextra 21662477 21662919 -7341737 + HETA LINE telomeric 190 616 -5465 1 750 4659 45 102 0 chrUextra 21663039 21663686 -7340970 + PROTOP DNA P 1 713 -3767 1 750 5581 22 6 0 chrUextra 21663787 21664453 -7340203 - ROO_I LTR Pao -3941 4315 3646 1 750 24 0 0 0 chrUextra 21664580 21664604 -7340052 + AT_rich Low_complexity Low_complexity 1 24 0 1 750 255 105 0 0 chrUextra 21664849 21664887 -7339769 - BARI1 DNA Tc1 -1710 40 3 1 750 3003 11 33 0 chrUextra 21664855 21665217 -7339439 + IDEFIX_LTR LTR Gypsy 1 374 -220 1 750 4152 28 2 2 chrUextra 21665320 21665819 -7338837 - NINJA_I LTR Pao -1514 4497 3999 1 750 1408 43 0 31 chrUextra 21665796 21665987 -7338669 - NINJA_I LTR Pao -3164 2847 2663 1 750 2793 170 55 13 chrUextra 21666088 21666725 -7337931 - SAR_DM Satellite Satellite -614 858 195 1 750 785 107 0 0 chrUextra 21666632 21666754 -7337902 + ARS406_DM Unknown Unknown 1 122 -231 1 750 5749 19 0 0 chrUextra 21666854 21667521 -7337135 + ROO_I LTR Pao 6798 7464 -792 1 750 34 24 0 0 chrUextra 21667843 21667884 -7336772 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 3021 182 6 8 chrUextra 21668413 21669055 -7335601 - SAR_DM Satellite Satellite -411 1061 421 1 750 5920 1 0 6 chrUextra 21669155 21669822 -7334834 - LSU-rRNA_Dme rRNA rRNA -1102 2798 2136 1 750 885 0 32 24 chrUextra 21669922 21670047 -7334609 + NTS_DM Other Other 115 240 0 1 750 1930 4 17 13 chrUextra 21670047 21670286 -7334370 + NTS_DM Other Other 1 240 0 1 750 1733 5 0 0 chrUextra 21670286 21670487 -7334169 + NTS_DM Other Other 1 201 -39 1 750 333 43 0 61 chrUextra 21670540 21670589 -7334067 + NTS_DM Other Other 25 70 -170 1 750 587 107 29 0 chrUextra 21670689 21670792 -7333864 - PROTOP_B DNA P -254 899 794 1 750 293 50 0 0 chrUextra 21670797 21670857 -7333799 - PROTOP_B DNA P -522 631 572 1 750 3226 47 62 30 chrUextra 21670850 21671352 -7333304 - PROTOP_B DNA P -217 936 419 1 750 1591 10 0 0 chrUextra 21671458 21671658 -7332998 + STALKER4_I LTR Gypsy 6331 6530 0 1 750 3359 46 1 14 chrUextra 21671658 21672097 -7332559 + STALKER4_LTR LTR Gypsy 1 399 -3 1 750 4742 18 22 0 chrUextra 21672226 21672780 -7331876 + R1_DM LINE R1 4789 5354 -2 1 750 519 59 0 0 chrUextra 21672815 21672883 -7331773 + R1_DM LINE R1 1 68 -5288 1 750 5209 30 62 0 chrUextra 21672990 21673657 -7330999 - R1_DM LINE R1 -1839 3517 2810 1 750 1564 6 0 0 chrUextra 21673757 21673930 -7330726 - LSU-rRNA_Dme rRNA rRNA -1088 2812 2640 1 750 4509 4 0 0 chrUextra 21673928 21674424 -7330232 - R1_DM LINE R1 0 5356 4861 1 750 379 0 0 0 chrUextra 21674524 21674565 -7330091 - NTS_DM Other Other -162 78 38 1 750 877 9 0 35 chrUextra 21674565 21674678 -7329978 - NTS_DM Other Other -107 133 25 1 750 1304 18 0 6 chrUextra 21674731 21674896 -7329760 - NTS_DM Other Other -39 201 38 1 750 907 9 0 27 chrUextra 21674896 21675008 -7329648 - NTS_DM Other Other -107 133 25 1 750 949 23 0 8 chrUextra 21675060 21675191 -7329465 - NTS_DM Other Other -39 201 72 1 750 5921 3 0 0 chrUextra 21675291 21675958 -7328698 + DM297_I LTR Gypsy 535 1201 -4966 1 750 5688 19 0 1 chrUextra 21676058 21676725 -7327931 - STALKER4_I LTR Gypsy -4071 2459 1794 1 750 3105 176 8 9 chrUextra 21676837 21677490 -7327166 - SAR_DM Satellite Satellite -396 1076 425 1 750 6052 3 0 0 chrUextra 21678359 21679026 -7325630 + DOC LINE Jockey 3224 3890 -835 1 750 241 152 0 0 chrUextra 21679126 21679172 -7325484 - ARS406_DM Unknown Unknown -307 46 1 1 750 3102 178 9 8 chrUextra 21679132 21679789 -7324867 + SAR_DM Satellite Satellite 246 903 -569 1 750 4990 32 14 5 chrUextra 21679893 21680560 -7324096 - Transib5 DNA Transib -1235 1766 1054 1 750 4723 44 139 5 chrUextra 21680660 21681327 -7323329 + R1_DM LINE R1 813 1569 -3787 1 750 2877 192 14 8 chrUextra 21681427 21682083 -7322573 + SAR_DM Satellite Satellite 278 937 -535 1 750 480 198 0 10 chrUextra 21682194 21682291 -7322365 - HETRP_DM Satellite Satellite -248 1624 1529 1 750 494 224 16 16 chrUextra 21682419 21682546 -7322110 - HETRP_DM Satellite Satellite -197 1675 1549 1 750 192 40 0 0 chrUextra 21682546 21682571 -7322085 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 750 687 193 14 14 chrUextra 21682697 21682844 -7321812 - HETRP_DM Satellite Satellite -197 1675 1529 1 750 3220 173 14 8 chrUextra 21682964 21683628 -7321028 - SAR_DM Satellite Satellite -549 923 256 1 750 2190 176 9 11 chrUextra 21683728 21684395 -7320261 - SAR_DM Satellite Satellite -489 665 1 1 750 3006 183 11 9 chrUextra 21684495 21685157 -7319499 + SAR_DM Satellite Satellite 284 946 -526 1 750 5440 24 3 1 chrUextra 21685262 21685929 -7318727 - PROTOP DNA P -65 4415 3748 1 750 22 88 0 0 chrUextra 21686418 21686475 -7318181 + AT_rich Low_complexity Low_complexity 1 57 0 1 750 26 30 0 0 chrUextra 21686612 21686645 -7318011 + AT_rich Low_complexity Low_complexity 1 33 0 1 750 2716 191 20 28 chrUextra 21686798 21687460 -7317196 - SAR_DM Satellite Satellite -662 656 1 1 750 2843 179 9 21 chrUextra 21687563 21688219 -7316437 + SAR_DM Satellite Satellite 472 1119 -353 1 750 273 175 32 0 chrUextra 21688165 21688228 -7316428 - XDMR Unknown Unknown 0 361 297 1 750 538 183 130 0 chrUextra 21688330 21688461 -7316195 - Stalker2_I LTR Gypsy -7013 389 242 1 750 306 105 0 50 chrUextra 21688629 21688689 -7315967 - Stalker2_I LTR Gypsy -7345 57 1 1 750 345 25 0 0 chrUextra 21688689 21688716 -7315940 - STALKER4_I LTR Gypsy -6503 27 1 1 750 2495 11 0 4 chrUextra 21688716 21688997 -7315659 - STALKER4_LTR LTR Gypsy 0 402 123 1 750 514 119 36 0 chrUextra 21689379 21689463 -7315193 - NTS_DM Other Other -150 90 4 1 750 1281 6 12 18 chrUextra 21689573 21689736 -7314920 - NTS_DM Other Other -78 162 1 1 750 3280 166 14 12 chrUextra 21689864 21690528 -7314128 + SAR_DM Satellite Satellite 373 1037 -435 1 750 5994 1 0 1 chrUextra 21690631 21691298 -7313358 - R1_DM LINE R1 -2989 2367 1702 1 750 5793 15 0 1 chrUextra 21691400 21692065 -7312591 - Gypsy4_I LTR Gypsy -1643 4645 3982 1 750 1224 77 0 0 chrUextra 21692165 21692464 -7312192 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 750 998 96 0 11 chrUextra 21692465 21692629 -7312027 + (AGATG)n Simple_repeat Simple_repeat 3 165 0 1 750 1173 78 0 0 chrUextra 21692629 21692808 -7311848 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 750 998 96 0 11 chrUextra 21692808 21692823 -7311833 + (AGATG)n Simple_repeat Simple_repeat 3 17 0 1 750 570 203 15 15 chrUextra 21692932 21693062 -7311594 + HETRP_DM Satellite Satellite 1546 1675 -197 1 750 715 179 14 14 chrUextra 21693199 21693346 -7311310 + HETRP_DM Satellite Satellite 1529 1675 -197 1 750 489 196 0 61 chrUextra 21693485 21693599 -7311057 + HETRP_DM Satellite Satellite 1518 1624 -248 1 750 5482 12 1 1 chrUextra 21693699 21694366 -7310290 + QUASIMODO_I LTR Gypsy 4698 5364 -696 1 750 21 89 0 0 chrUextra 21694783 21694839 -7309817 + AT_rich Low_complexity Low_complexity 1 56 0 1 750 2479 4 4 0 chrUextra 21694858 21695133 -7309523 - SSU-rRNA_Dme rRNA rRNA 0 1995 1720 1 750 4562 52 33 12 chrUextra 21695237 21695895 -7308761 + TART LINE telomeric 2443 3114 -11363 1 750 1800 5 0 0 chrUextra 21696002 21696204 -7308452 - LSU-rRNA_Dme rRNA rRNA -3698 202 1 1 750 21 95 0 0 chrUextra 21696216 21696279 -7308377 + AT_rich Low_complexity Low_complexity 1 63 0 1 750 34 24 0 0 chrUextra 21696492 21696533 -7308123 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 2613 137 159 31 chrUextra 21696767 21697431 -7307225 + TART LINE telomeric 4813 5387 -694 1 750 391 52 0 17 chrUextra 21697534 21697593 -7307063 + NTS_DM Other Other 144 201 -39 1 750 21 57 0 0 chrUextra 21697593 21697628 -7307028 + AT_rich Low_complexity Low_complexity 1 35 0 1 750 870 9 9 27 chrUextra 21697654 21697765 -7306891 + NTS_DM Other Other 25 133 -107 1 750 851 0 0 0 chrUextra 21697765 21697861 -7306795 + NTS_DM Other Other 38 133 -107 1 750 1450 25 20 20 chrUextra 21697861 21698064 -7306592 + NTS_DM Other Other 38 240 0 1 750 1138 22 0 0 chrUextra 21698064 21698198 -7306458 + NTS_DM Other Other 1 134 -106 1 750 1219 175 89 24 chrUextra 21698301 21698594 -7306062 - Gypsy12_LTR LTR Gypsy -867 1469 1158 1 750 578 261 53 89 chrUextra 21698605 21698966 -7305690 - Gypsy12_LTR LTR Gypsy -1257 1079 732 1 750 5415 43 0 0 chrUextra 21699068 21699735 -7304921 + DMRT1B LINE R1 4094 4760 -423 1 750 1015 328 10 11 chrUextra 21699836 21700463 -7304193 - TABOR_I LTR Gypsy -3367 2969 2344 1 750 1620 9 30 0 chrUextra 21700645 21700977 -7303679 + (TTCTC)n Simple_repeat Simple_repeat 1 341 0 1 750 665 138 41 16 chrUextra 21701024 21701268 -7303388 + GA-rich Low_complexity Low_complexity 1 250 0 1 750 5962 0 3 5 chrUextra 21701369 21702036 -7302620 + SSU-rRNA_Dme rRNA rRNA 1162 1827 -168 1 750 5101 39 15 29 chrUextra 21702136 21702802 -7301854 - R1_DM LINE R1 -4040 1316 660 1 750 234 167 21 0 chrUextra 21702964 21703012 -7301644 - NTS_DM Other Other -191 49 1 1 750 1088 138 35 22 chrUextra 21703012 21703242 -7301414 - NTS_DM Other Other 0 240 8 1 750 291 125 21 0 chrUextra 21703340 21703388 -7301268 - NTS_DM Other Other -191 49 1 1 750 727 130 20 7 chrUextra 21703423 21703570 -7301086 - NTS_DM Other Other -39 201 53 1 750 600 142 0 0 chrUextra 21703670 21703776 -7300880 - ARS406_DM Unknown Unknown -247 106 1 1 750 2991 183 11 8 chrUextra 21703683 21704337 -7300319 + SAR_DM Satellite Satellite 195 850 -622 1 750 3324 131 5 27 chrUextra 21704439 21705003 -7299653 + Gypsy12_LTR LTR Gypsy 1785 2336 0 1 750 780 20 40 0 chrUextra 21705003 21705102 -7299554 + Gypsy12_I LTR Gypsy 1 103 -5443 1 750 2952 9 0 0 chrUextra 21705204 21705533 -7299123 + LSU-rRNA_Dme rRNA rRNA 2322 2650 -1250 1 750 3122 3 0 0 chrUextra 21705522 21705871 -7298785 + R1_DM LINE R1 3907 4255 -1101 1 750 302 0 0 0 chrUextra 21705971 21706015 -7298641 + Copia_LTR LTR Copia 233 276 0 1 750 1707 18 13 22 chrUextra 21706015 21706241 -7298415 - NTS_DM Other Other -16 224 1 1 750 1835 17 17 17 chrUextra 21706241 21706481 -7298175 - NTS_DM Other Other 0 240 1 1 750 991 33 25 25 chrUextra 21706481 21706638 -7298018 - NTS_DM Other Other 0 240 84 1 750 4903 23 0 69 chrUextra 21706738 21707405 -7297251 - NINJA_I LTR Pao -5212 799 179 1 750 2659 72 29 30 chrUextra 21707507 21708172 -7296484 + DMSAT6 Satellite Satellite 1 664 -285 1 750 5433 0 2 3 chrUextra 21708338 21708939 -7295717 - LSU-rRNA_Dme rRNA rRNA 0 3900 3301 1 750 5709 21 16 0 chrUextra 21709040 21709706 -7294950 - Gypsy2_I LTR Gypsy -2882 3253 2577 1 750 5417 0 2 5 chrUextra 21709872 21710473 -7294183 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 1 750 1042 58 0 0 chrUextra 21710573 21710711 -7293945 + ARS406_DM Unknown Unknown 52 189 -164 1 750 2730 157 29 7 chrUextra 21710588 21711139 -7293517 - SAR_DM Satellite Satellite -535 937 375 1 750 755 96 0 0 chrUextra 21711125 21711240 -7293416 + ARS406_DM Unknown Unknown 31 145 -208 1 750 5802 6 0 0 chrUextra 21711340 21711989 -7292667 + STALKER4_I LTR Gypsy 4144 4792 -1738 1 750 5776 11 1 1 chrUextra 21712108 21712774 -7291882 - R1_DM LINE R1 -1291 4065 3400 1 750 5434 0 0 40 chrUextra 21712874 21713541 -7291115 + LSU-rRNA_Dme rRNA rRNA 56 695 -3205 1 750 4956 30 3 40 chrUextra 21713641 21714308 -7290348 - DOC2_DM LINE Jockey -3396 1397 756 1 750 23 0 0 0 chrUextra 21714436 21714459 -7290197 + AT_rich Low_complexity Low_complexity 1 23 0 1 750 5494 0 1 38 chrUextra 21715175 21715842 -7288814 + LSU-rRNA_Dme rRNA rRNA 157 799 -3101 1 750 4248 0 0 50 chrUextra 21715942 21716461 -7288195 - LSU-rRNA_Dme rRNA rRNA -3407 493 1 1 750 21 95 0 0 chrUextra 21716473 21716536 -7288120 + AT_rich Low_complexity Low_complexity 1 63 0 1 750 1119 16 0 0 chrUextra 21716709 21716837 -7287819 - R1_DM LINE R1 -190 5166 5039 1 750 4884 2 0 0 chrUextra 21716839 21717376 -7287280 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2113 1 750 829 11 0 0 chrUextra 21717478 21717570 -7287086 + R1_DM LINE R1 5265 5356 0 1 750 5215 2 0 2 chrUextra 21717568 21718143 -7286513 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 1 750 3389 142 42 19 chrUextra 21718244 21718910 -7285746 + TART LINE telomeric 8924 9604 -4873 1 750 2901 172 46 12 chrUextra 21719022 21719677 -7284979 + SAR_DM Satellite Satellite 326 1002 -470 1 750 264 309 23 23 chrUextra 21719784 21719913 -7284743 - Invader3_I LTR Gypsy -1467 3421 3263 1 750 346 314 7 7 chrUextra 21720199 21720340 -7284316 - Invader3_I LTR Gypsy -1859 3029 2889 1 750 1547 0 0 0 chrUextra 21721043 21721211 -7283445 - SSU-rRNA_Dme rRNA rRNA 0 1995 1828 1 750 4806 4 0 0 chrUextra 21721311 21721840 -7282816 + LSU-rRNA_Dme rRNA rRNA 2053 2581 -1319 1 750 1292 7 0 0 chrUextra 21721836 21721978 -7282678 + R2_DM LINE R2 1975 2116 -1491 1 750 965 9 0 0 chrUextra 21722078 21722188 -7282468 - LSU-rRNA_Dme rRNA rRNA -3790 110 1 1 750 21 95 0 0 chrUextra 21722200 21722263 -7282393 + AT_rich Low_complexity Low_complexity 1 63 0 1 750 34 24 0 0 chrUextra 21722476 21722517 -7282139 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 1167 7 0 0 chrUextra 21722865 21723000 -7281656 - 5S_DM RNA RNA 0 135 1 1 750 1176 0 0 0 chrUextra 21723224 21723359 -7281297 - 5S_DM RNA RNA 0 135 1 1 750 2384 100 31 6 chrUextra 21724403 21725046 -7279610 - DMSAT6 Satellite Satellite 0 659 1 1 750 349 0 68 51 chrUextra 21725146 21725205 -7279451 + NTS_DM Other Other 181 240 0 1 750 1734 21 17 17 chrUextra 21725205 21725445 -7279211 + NTS_DM Other Other 1 240 0 1 750 1803 8 17 17 chrUextra 21725445 21725685 -7278971 + NTS_DM Other Other 1 240 0 1 750 1038 16 8 0 chrUextra 21725685 21725813 -7278843 + NTS_DM Other Other 1 129 -111 1 750 4664 0 24 0 chrUextra 21725913 21726466 -7278190 - G2_DM LINE Jockey -568 2534 1969 1 750 876 17 0 0 chrUextra 21726465 21726580 -7278076 + FW_DM LINE Jockey 2840 2954 -1738 1 750 5433 19 0 1 chrUextra 21726680 21727347 -7277309 - G2_DM LINE Jockey -418 2684 2019 1 750 307 24 24 0 chrUextra 21728214 21728255 -7276401 + ARS406_DM Unknown Unknown 148 189 -164 1 750 2907 169 11 11 chrUextra 21728223 21728876 -7275780 - SAR_DM Satellite Satellite -625 847 195 1 750 2772 165 33 15 chrUextra 21729751 21730409 -7274247 + SAR_DM Satellite Satellite 407 1076 -396 1 750 5467 21 0 0 chrUextra 21730527 21731182 -7273474 + R1_DM LINE R1 3150 3804 -1552 1 750 5398 25 0 0 chrUextra 21731282 21731949 -7272707 - ROO_I LTR Pao -6369 1887 1221 1 750 5038 2 0 0 chrUextra 21732049 21732622 -7272034 - SSU-rRNA_Dme rRNA rRNA -1422 573 1 1 750 3022 164 8 21 chrUextra 21732816 21733483 -7271173 - SAR_DM Satellite Satellite -439 1033 376 1 750 1716 15 0 0 chrUextra 21733583 21733783 -7270873 + R1_DM LINE R1 5157 5356 0 1 750 3209 58 5 5 chrUextra 21733818 21734250 -7270406 + R1_DM LINE R1 2 433 -4923 1 750 2596 181 14 29 chrUextra 21734350 21735017 -7269639 - SAR_DM Satellite Satellite -359 1113 457 1 750 656 124 0 8 chrUextra 21735117 21735239 -7269417 - ARS406_DM Unknown Unknown -232 121 1 1 750 2568 179 17 25 chrUextra 21735145 21735783 -7268873 + SAR_DM Satellite Satellite 195 827 -645 1 750 1250 131 0 0 chrUextra 21736651 21736842 -7267814 + Gypsy12_I LTR Gypsy 1627 1817 -3729 1 750 3154 84 55 17 chrUextra 21736844 21737317 -7267339 + Gypsy12_I LTR Gypsy 4466 4956 -590 1 750 447 250 22 43 chrUextra 21737422 21737606 -7267050 + Gypsy12_LTR LTR Gypsy 899 1078 -1258 1 750 1303 182 165 19 chrUextra 21737618 21738048 -7266608 + Gypsy12_LTR LTR Gypsy 1158 1650 -686 1 750 4966 2 5 7 chrUextra 21738185 21738781 -7265875 + LSU-rRNA_Dme rRNA rRNA 1194 1788 -2112 1 750 2641 189 16 17 chrUextra 21740486 21741153 -7263503 - SAR_DM Satellite Satellite -1084 666 1 1 750 309 353 22 22 chrUextra 21741253 21741476 -7263180 - Gypsy12_I LTR Gypsy -2265 3281 3059 1 750 2261 62 0 75 chrUextra 21741388 21741734 -7262922 - CIRCE LINE Composite -5064 1292 973 1 750 381 0 0 0 chrUextra 21741876 21741920 -7262736 - CIRCE LINE Composite -5386 970 927 1 750 2514 89 12 20 chrUextra 21742020 21742663 -7261993 - DMSAT6 Satellite Satellite -39 638 1 1 750 816 11 0 0 chrUextra 21742787 21742880 -7261776 + (TTGTG)n Simple_repeat Simple_repeat 3 95 0 1 750 5505 22 1 0 chrUextra 21743554 21744221 -7260435 - R1_DM LINE R1 -2761 2595 1928 1 750 5337 2 2 0 chrUextra 21744321 21744934 -7259722 - LSU-rRNA_Dme rRNA rRNA -647 3253 2640 1 750 430 0 0 18 chrUextra 21744932 21744987 -7259669 - R1_DM LINE R1 0 5356 5303 1 750 3613 37 2 0 chrUextra 21745087 21745548 -7259108 + G2_DM LINE Jockey 2628 3089 -13 1 750 1546 54 0 0 chrUextra 21745548 21745753 -7258903 - G2_DM LINE Jockey -574 2528 2324 1 750 5660 9 0 0 chrUextra 21745853 21746519 -7258137 + Invader6_I LTR Gypsy 3252 3917 -182 1 750 3001 173 6 8 chrUextra 21746631 21747284 -7257372 - SAR_DM Satellite Satellite -396 1076 425 1 750 5102 2 3 0 chrUextra 21747385 21747977 -7256679 - LSU-rRNA_Dme rRNA rRNA -1519 2381 1788 1 750 279 125 236 0 chrUextra 21748217 21748361 -7256295 + (CTAAA)n Simple_repeat Simple_repeat 1 178 0 1 750 279 125 236 0 chrUextra 21748376 21748793 -7255863 + (CTAAA)n Simple_repeat Simple_repeat 1 515 0 1 750 5403 29 0 0 chrUextra 21749683 21750349 -7254307 - R1_DM LINE R1 -2273 3083 2418 1 750 4829 79 0 12 chrUextra 21750450 21751115 -7253541 - Gypsy12_I LTR Gypsy -248 5298 4642 1 750 5362 24 42 1 chrUextra 21751215 21751881 -7252775 - R1_DM LINE R1 -612 4744 4052 1 750 1686 310 8 14 chrUextra 21751984 21752644 -7252012 - MICROPIA_I LTR Gypsy -989 3487 2832 1 750 5103 0 96 1 chrUextra 21752747 21753413 -7251243 + ROO_I LTR Pao 474 1202 -7054 1 750 21 0 0 0 chrUextra 21753735 21753756 -7250900 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 3406 0 0 3 chrUextra 21753788 21754179 -7250477 + ROO_LTR LTR Pao 1 390 -38 1 750 3457 66 52 26 chrUextra 21754279 21754945 -7249711 + PROTOP_A DNA P 508 1136 -17 1 750 378 195 104 0 chrUextra 21755046 21755265 -7249391 + (CTTAT)n Simple_repeat Simple_repeat 1 241 0 1 750 378 211 106 0 chrUextra 21755158 21755367 -7249289 + (TCTTG)n Simple_repeat Simple_repeat 1 231 0 1 750 322 226 101 0 chrUextra 21755300 21755459 -7249197 + (CTTAT)n Simple_repeat Simple_repeat 3 177 0 1 750 358 201 107 0 chrUextra 21755532 21755691 -7248965 + (CTATT)n Simple_repeat Simple_repeat 5 180 0 1 750 282 244 92 18 chrUextra 21756620 21756783 -7247873 + (TTCTG)n Simple_repeat Simple_repeat 5 179 0 1 750 284 195 76 41 chrUextra 21756824 21756995 -7247661 + (TCTG)n Simple_repeat Simple_repeat 2 178 0 1 750 291 185 75 69 chrUextra 21756931 21757105 -7247551 + (TCTTG)n Simple_repeat Simple_repeat 3 177 0 1 93 2920 176 9 11 chrUextra 21757344 21758006 -7246650 - SAR_DM Satellite Satellite -561 911 251 1 751 1729 4 17 17 chrUextra 21758109 21758339 -7246317 - NTS_DM Other Other -10 230 1 1 751 1861 0 17 13 chrUextra 21758339 21758578 -7246078 - NTS_DM Other Other 0 240 1 1 751 1413 10 25 15 chrUextra 21758578 21758775 -7245881 - NTS_DM Other Other 0 240 42 1 751 4686 4 0 0 chrUextra 21758993 21759541 -7245115 + QUASIMODO_LTR LTR Gypsy 1 548 -110 1 751 692 226 29 41 chrUextra 21759641 21759886 -7244770 + Gypsy12_LTR LTR Gypsy 1014 1255 -1081 1 751 986 235 85 24 chrUextra 21759896 21760306 -7244350 + Gypsy12_LTR LTR Gypsy 1456 1890 -446 1 751 4741 41 40 22 chrUextra 21760426 21761073 -7243583 - DMCR1A LINE CR1 -1668 2802 2144 1 751 870 9 0 27 chrUextra 21761212 21761324 -7243332 + NTS_DM Other Other 25 133 -107 1 751 1232 24 0 6 chrUextra 21761324 21761489 -7243167 + NTS_DM Other Other 38 201 -39 1 751 848 18 0 27 chrUextra 21761541 21761653 -7243003 + NTS_DM Other Other 25 133 -107 1 751 1234 24 0 6 chrUextra 21761653 21761818 -7242838 + NTS_DM Other Other 38 201 -39 1 751 2317 53 0 75 chrUextra 21762107 21762453 -7242203 + CIRCE LINE Composite 973 1292 -5064 1 751 318 345 24 24 chrUextra 21762394 21762519 -7242137 + Gypsy12_I LTR Gypsy 3088 3298 -2248 1 751 448 29 0 186 chrUextra 21762519 21762605 -7242051 + CIRCE LINE Composite 1305 1374 -4982 1 751 2923 153 12 38 chrUextra 21762706 21763358 -7241298 - SAR_DM Satellite Satellite -485 987 353 1 751 4227 107 5 3 chrUextra 21763471 21764135 -7240521 + S_DM DNA Tc1 893 1557 -179 1 751 5320 22 48 0 chrUextra 21764237 21764903 -7239753 + R1_DM LINE R1 1658 2355 -3001 1 751 1561 14 23 18 chrUextra 21765003 21765224 -7239432 + NTS_DM Other Other 19 240 0 1 751 1734 21 17 17 chrUextra 21765224 21765464 -7239192 + NTS_DM Other Other 1 240 0 1 751 1662 5 0 5 chrUextra 21765464 21765669 -7238987 + NTS_DM Other Other 1 204 -36 1 751 1350 111 9 22 chrUextra 21765772 21766003 -7238653 + Gypsy9_I LTR Gypsy 1672 1899 -2778 1 751 1816 34 0 4 chrUextra 21766201 21766435 -7238221 - CIRCE LINE Composite -1376 4980 4748 1 751 2770 179 23 12 chrUextra 21766536 21767196 -7237460 + SAR_DM Satellite Satellite 237 903 -569 1 751 5517 12 1 0 chrUextra 21767303 21767967 -7236689 + R1_DM LINE R1 178 842 -4514 1 751 5672 0 3 1 chrUextra 21768067 21768733 -7235923 + R1_DM LINE R1 1081 1747 -3609 1 751 3116 21 21 0 chrUextra 21768833 21769214 -7235442 - R1_DM LINE R1 -2691 2665 2277 1 751 436 0 0 0 chrUextra 21769214 21769264 -7235392 + CIRCE LINE Composite 4931 4980 -1376 1 751 1632 13 22 18 chrUextra 21769599 21769827 -7234829 + NTS_DM Other Other 12 240 0 1 751 1734 21 17 17 chrUextra 21769827 21770067 -7234589 + NTS_DM Other Other 1 240 0 1 751 1543 20 0 5 chrUextra 21770067 21770265 -7234391 + NTS_DM Other Other 1 197 -43 1 751 5689 0 0 0 chrUextra 21770365 21771031 -7233625 - FW_DM LINE Jockey -1439 3253 2588 1 751 5112 1 8 9 chrUextra 21771131 21771797 -7232859 + Stalker2_I LTR Gypsy 567 1231 -6171 1 751 3488 12 0 0 chrUextra 21771897 21772305 -7232351 + QUASIMODO_LTR LTR Gypsy 251 658 0 1 751 2047 35 0 0 chrUextra 21772305 21772563 -7232093 + QUASIMODO_I LTR Gypsy 1 258 -5802 1 751 388 100 0 0 chrUextra 21772664 21772724 -7231932 + G2_DM LINE Jockey 2469 2528 -574 1 751 982 44 0 0 chrUextra 21772746 21772883 -7231773 - G2_DM LINE Jockey -32 3070 2934 1 751 3227 64 29 0 chrUextra 21772879 21773329 -7231327 + G2_DM LINE Jockey 2527 2989 -113 1 751 2827 178 18 9 chrUextra 21773430 21774095 -7230561 + SAR_DM Satellite Satellite 246 916 -556 1 751 37 39 0 0 chrUextra 21774197 21774248 -7230408 + AT_rich Low_complexity Low_complexity 1 51 0 1 751 28 48 0 0 chrUextra 21774602 21774644 -7230012 + AT_rich Low_complexity Low_complexity 1 42 0 1 751 5572 11 1 3 chrUextra 21774961 21775627 -7229029 + R1_DM LINE R1 2000 2664 -2692 1 751 3510 35 0 0 chrUextra 21775727 21776156 -7228500 + R1_DM LINE R1 1400 1828 -3528 1 751 1892 50 0 0 chrUextra 21776154 21776393 -7228263 + R1_DM LINE R1 1317 1555 -3801 1 751 1202 26 0 0 chrUextra 21776493 21776644 -7228012 - NTS_DM Other Other -89 151 1 1 751 1734 21 17 17 chrUextra 21776644 21776884 -7227772 - NTS_DM Other Other 0 240 1 1 751 1397 20 20 20 chrUextra 21776885 21777087 -7227569 - NTS_DM Other Other -1 239 38 1 751 550 14 0 0 chrUextra 21777087 21777159 -7227497 - NTS_DM Other Other -107 133 62 1 751 2790 182 9 6 chrUextra 21777265 21777905 -7226751 - SAR_DM Satellite Satellite -636 836 195 1 751 651 124 0 0 chrUextra 21777812 21777925 -7226731 + ARS406_DM Unknown Unknown 1 113 -240 1 751 1206 17 27 22 chrUextra 21778025 21778209 -7226447 + NTS_DM Other Other 56 240 0 1 751 1774 13 17 17 chrUextra 21778209 21778449 -7226207 + NTS_DM Other Other 1 240 0 1 751 1858 8 12 12 chrUextra 21778449 21778689 -7225967 + NTS_DM Other Other 1 240 0 1 751 3073 36 146 1 chrUextra 21778791 21779457 -7225199 - R1_DM LINE R1 -3691 1665 904 1 751 5400 31 0 0 chrUextra 21779557 21780223 -7224433 - R1_DM LINE R1 -3338 2018 1353 1 751 1364 180 8 0 chrUextra 21780323 21780590 -7224066 - Gypsy2_I LTR Gypsy -780 5355 5087 1 751 240 353 0 0 chrUextra 21780742 21780844 -7223812 - G2_DM LINE Jockey -2720 382 281 1 751 2776 188 8 12 chrUextra 21781089 21781745 -7222911 + SAR_DM Satellite Satellite 249 901 -571 1 751 736 41 0 10 chrUextra 21781656 21781755 -7222901 - ARS406_DM Unknown Unknown -164 189 92 1 751 2889 175 9 8 chrUextra 21781875 21782521 -7222135 - SAR_DM Satellite Satellite -396 1076 430 1 751 2904 177 8 8 chrUextra 21782621 21783286 -7221370 + SAR_DM Satellite Satellite 198 862 -610 1 751 2928 170 18 9 chrUextra 21783389 21784053 -7220603 + SAR_DM Satellite Satellite 332 1001 -471 1 751 5706 3 1 0 chrUextra 21784153 21784819 -7219837 + DOC LINE Jockey 3929 4595 -130 1 751 5179 39 3 1 chrUextra 21784919 21785584 -7219072 + G2_DM LINE Jockey 1829 2494 -608 1 751 774 31 0 0 chrUextra 21785685 21785781 -7218875 - R1_DM LINE R1 -3884 1472 1377 1 751 4337 39 50 0 chrUextra 21785789 21786351 -7218305 + FW_DM LINE Jockey 1 590 -4102 1 751 5755 0 0 0 chrUextra 21786451 21787117 -7217539 + DOC LINE Jockey 1313 1978 -2747 1 751 5753 3 0 0 chrUextra 21787217 21787883 -7216773 + DMRT1B LINE R1 1568 2233 -2950 1 751 5611 5 6 1 chrUextra 21787983 21788649 -7216007 - R2_DM LINE R2 -2523 1084 416 1 751 2659 163 25 57 chrUextra 21788752 21789409 -7215247 - SAR_DM Satellite Satellite -1086 636 1 1 751 5799 1 3 0 chrUextra 21789515 21790181 -7214475 + SSU-rRNA_Dme rRNA rRNA 137 804 -1191 1 751 361 0 0 0 chrUextra 21790281 21790325 -7214331 + MDG1_I LTR Gypsy 6553 6596 0 1 751 3524 20 2 0 chrUextra 21790325 21790766 -7213890 + MDG1_LTR LTR Gypsy 1 442 0 1 751 1374 34 0 28 chrUextra 21790766 21790947 -7213709 + MAX_I LTR Pao 3691 3866 -4048 1 751 3114 167 8 8 chrUextra 21791048 21791711 -7212945 - SAR_DM Satellite Satellite -478 994 332 1 751 1850 4 17 13 chrUextra 21791835 21792074 -7212582 - NTS_DM Other Other 0 240 1 1 751 1678 34 17 17 chrUextra 21792074 21792314 -7212342 - NTS_DM Other Other 0 240 1 1 751 1064 19 24 24 chrUextra 21792314 21792479 -7212177 - NTS_DM Other Other 0 240 76 1 751 2975 167 30 12 chrUextra 21792579 21793239 -7211417 + SAR_DM Satellite Satellite 387 1058 -414 1 751 3655 167 39 0 chrUextra 21793345 21794011 -7210645 - GTWIN_I LTR Gypsy -3921 2500 1809 1 751 774 11 0 0 chrUextra 21794111 21794201 -7210455 - NTS_DM Other Other -150 90 1 1 751 1734 21 17 17 chrUextra 21794201 21794441 -7210215 - NTS_DM Other Other 0 240 1 1 751 1408 20 20 20 chrUextra 21794441 21794644 -7210012 - NTS_DM Other Other 0 240 38 1 751 795 10 0 0 chrUextra 21794644 21794740 -7209916 - NTS_DM Other Other -107 133 38 1 751 243 27 0 0 chrUextra 21794740 21794777 -7209879 - NTS_DM Other Other -107 133 97 1 751 5481 29 0 0 chrUextra 21794877 21795543 -7209113 + R1_DM LINE R1 1488 2153 -3203 1 751 1457 268 68 18 chrUextra 21795643 21796273 -7208383 + G6_DM LINE Jockey 275 936 -1106 1 751 1004 169 97 30 chrUextra 21797185 21797454 -7207202 - Gypsy12_LTR LTR Gypsy -892 1444 1158 1 751 284 262 94 41 chrUextra 21797466 21797637 -7207019 - Gypsy12_LTR LTR Gypsy -1258 1078 899 1 751 1820 200 40 15 chrUextra 21797941 21798607 -7206049 + SAR_DM Satellite Satellite 1 682 -216 1 751 2713 61 6 150 chrUextra 21798707 21799366 -7205290 - BATUMI_I LTR Pao -6863 1100 537 1 751 769 21 0 0 chrUextra 21799473 21799567 -7205089 + NTS_DM Other Other 40 133 -107 1 751 1344 35 20 20 chrUextra 21799567 21799770 -7204886 + NTS_DM Other Other 38 240 0 1 751 1738 21 17 17 chrUextra 21799770 21800010 -7204646 + NTS_DM Other Other 1 240 0 1 751 1099 8 0 0 chrUextra 21800010 21800139 -7204517 + NTS_DM Other Other 1 129 -111 1 751 2979 165 15 16 chrUextra 21800239 21800905 -7203751 - SAR_DM Satellite Satellite -472 1000 336 1 751 3078 163 11 8 chrUextra 21801008 21801671 -7202985 + SAR_DM Satellite Satellite 369 1033 -439 1 751 2528 172 19 34 chrUextra 21801787 21802437 -7202219 - SAR_DM Satellite Satellite -356 1116 477 1 751 27 73 0 0 chrUextra 21802919 21802974 -7201682 + AT_rich Low_complexity Low_complexity 1 55 0 1 751 23 68 0 0 chrUextra 21803012 21803056 -7201600 + AT_rich Low_complexity Low_complexity 1 44 0 1 751 26 30 0 0 chrUextra 21803102 21803135 -7201521 + AT_rich Low_complexity Low_complexity 1 33 0 1 751 1798 0 5 0 chrUextra 21803303 21803511 -7201145 - LSU-rRNA_Dme rRNA rRNA -1904 1996 1788 1 751 3507 0 5 2 chrUextra 21803555 21803969 -7200687 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1374 1 751 5541 11 1 1 chrUextra 21804069 21804735 -7199921 - R1_DM LINE R1 -1199 4157 3492 1 751 1491 179 17 6 chrUextra 21804835 21805498 -7199158 - SAR_DM Satellite Satellite -589 670 1 1 751 3015 152 23 39 chrUextra 21805603 21806266 -7198390 + TART LINE telomeric 9700 10351 -4126 1 751 2808 184 9 8 chrUextra 21806367 21807020 -7197636 + SAR_DM Satellite Satellite 284 937 -535 1 751 5769 0 3 1 chrUextra 21807133 21807799 -7196857 - SSU-rRNA_Dme rRNA rRNA -127 1868 1202 1 751 231 297 22 0 chrUextra 21807899 21807990 -7196666 + NOMAD_I LTR Gypsy 3984 4076 -2496 1 751 5493 21 0 0 chrUextra 21808665 21809331 -7195325 - R1_DM LINE R1 -751 4605 3940 1 751 2864 171 9 12 chrUextra 21809431 21810087 -7194569 + SAR_DM Satellite Satellite 420 1073 -399 1 751 5362 24 0 3 chrUextra 21810197 21810863 -7193793 + NINJA_I LTR Pao 5096 5759 -252 1 751 32 0 0 0 chrUextra 21811089 21811121 -7193535 + AT_rich Low_complexity Low_complexity 1 32 0 1 751 3249 3 0 3 chrUextra 21811253 21811629 -7193027 + SSU-rRNA_Dme rRNA rRNA 1 375 -1620 1 751 5590 5 0 3 chrUextra 21811729 21812395 -7192261 - DMRT1B LINE R1 -3454 1729 1066 1 751 1330 41 6 0 chrUextra 21812498 21812668 -7191988 + PROTOP_B DNA P 940 1110 -43 1 751 977 147 182 4 chrUextra 21812665 21812890 -7191766 - DMCR1A LINE CR1 -1125 3345 3081 1 751 932 153 120 5 chrUextra 21812977 21813161 -7191495 + DMLTR5 LTR Gypsy 40 244 -22 1 751 5850 1 0 0 chrUextra 21813261 21813927 -7190729 + SSU-rRNA_Dme rRNA rRNA 253 918 -1077 1 751 468 0 0 0 chrUextra 21814027 21814079 -7190577 + (CACAA)n Simple_repeat Simple_repeat 2 53 0 1 751 897 0 0 0 chrUextra 21814079 21814187 -7190469 + STALKER4_LTR LTR Gypsy 1 108 -294 1 751 4285 0 0 2 chrUextra 21814181 21814693 -7189963 + I_DM LINE I 3618 4128 -2103 1 751 301 270 118 85 chrUextra 21814799 21815070 -7189586 - Invader1_LTR LTR Gypsy -60 363 84 1 751 725 177 117 22 chrUextra 21815279 21815458 -7189198 + DMLTR5 LTR Gypsy 44 239 -27 1 751 336 0 0 0 chrUextra 21815559 21815604 -7189052 + NTS_DM Other Other 89 133 -107 1 751 1252 18 0 6 chrUextra 21815604 21815769 -7188887 + NTS_DM Other Other 38 201 -39 1 751 21 57 0 0 chrUextra 21815769 21815804 -7188852 + AT_rich Low_complexity Low_complexity 1 35 0 1 751 832 9 9 27 chrUextra 21815830 21815941 -7188715 + NTS_DM Other Other 25 133 -107 1 751 817 0 0 0 chrUextra 21815941 21816037 -7188619 + NTS_DM Other Other 38 133 -107 1 751 1287 27 16 21 chrUextra 21816037 21816225 -7188431 + NTS_DM Other Other 38 224 -16 1 751 2864 22 11 16 chrUextra 21816325 21816688 -7187968 - CIRCE LINE Composite -4108 2248 1888 1 751 579 296 42 57 chrUextra 21816353 21816755 -7187901 - Gypsy12_I LTR Gypsy -1316 4230 3835 1 751 1841 35 0 0 chrUextra 21816764 21816991 -7187665 - CIRCE LINE Composite -4474 1882 1656 1 751 5288 36 0 8 chrUextra 21817857 21818523 -7186133 - BATUMI_I LTR Pao -1896 6067 5407 1 751 2851 168 12 15 chrUextra 21818623 21819275 -7185381 - SAR_DM Satellite Satellite -454 1018 369 1 751 2406 88 12 31 chrUextra 21819389 21820055 -7184601 - DMSAT6 Satellite Satellite -23 653 1 1 751 5737 1 0 0 chrUextra 21820155 21820821 -7183835 - ROO_I LTR Pao -5637 2619 1954 1 751 1451 0 25 15 chrUextra 21820921 21821118 -7183538 + NTS_DM Other Other 42 240 0 1 751 1861 0 17 13 chrUextra 21821118 21821357 -7183299 + NTS_DM Other Other 1 240 0 1 751 1779 0 22 13 chrUextra 21821357 21821587 -7183069 + NTS_DM Other Other 1 232 -8 1 751 610 68 11 0 chrUextra 21821687 21821775 -7182881 - R1_DM LINE R1 -5267 89 1 1 751 4474 26 2 0 chrUextra 21821807 21822353 -7182303 - R1_DM LINE R1 0 5356 4810 1 751 2856 168 32 12 chrUextra 21823225 21823881 -7180775 + SAR_DM Satellite Satellite 369 1037 -435 1 751 5335 0 0 8 chrUextra 21823985 21824651 -7180005 + STALKER4_I LTR Gypsy 5710 6370 -160 1 751 394 39 0 0 chrUextra 21824758 21824809 -7179847 - R1_DM LINE R1 -5291 65 15 1 751 4938 31 2 0 chrUextra 21824808 21825417 -7179239 - R1_DM LINE R1 -551 4805 4196 1 751 830 0 0 0 chrUextra 21825517 21825612 -7179044 - NTS_DM Other Other -145 95 1 1 751 1847 4 17 13 chrUextra 21825612 21825851 -7178805 - NTS_DM Other Other 0 240 1 1 751 1843 4 17 13 chrUextra 21825851 21826090 -7178566 - NTS_DM Other Other 0 240 1 1 751 622 0 43 32 chrUextra 21826090 21826183 -7178473 - NTS_DM Other Other 0 240 147 1 751 5397 5 1 0 chrUextra 21826283 21826949 -7177707 + STALKER4_I LTR Gypsy 5661 6327 -203 1 751 230 281 11 11 chrUextra 21827473 21827563 -7177093 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 1 751 1014 7 0 0 chrUextra 21827815 21827951 -7176705 + HMSBEAGLE_I LTR Gypsy 652 787 -5742 1 751 974 29 52 12 chrUextra 21827971 21828143 -7176513 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 751 2673 12 6 3 chrUextra 21828143 21828481 -7176175 + HMSBEAGLE_I LTR Gypsy 969 1307 -5222 1 751 4281 39 54 36 chrUextra 21828581 21829247 -7175409 + PROTOP_A DNA P 265 942 -163 1 751 5509 1 1 0 chrUextra 21829349 21830013 -7174643 - R1_DM LINE R1 -4217 1139 475 1 751 430 204 0 11 chrUextra 21830131 21830225 -7174431 + HMSBEAGLE_I LTR Gypsy 5727 5819 -710 1 751 378 260 158 30 chrUextra 21830545 21830779 -7173877 + HMSBEAGLE_I LTR Gypsy 5810 6073 -456 1 751 1236 17 22 22 chrUextra 21830879 21831063 -7173593 + NTS_DM Other Other 57 240 0 1 751 1726 17 17 21 chrUextra 21831063 21831304 -7173352 + NTS_DM Other Other 1 240 0 1 751 1718 21 21 17 chrUextra 21831304 21831543 -7173113 + NTS_DM Other Other 1 240 0 1 751 5375 23 1 3 chrUextra 21831645 21832311 -7172345 + R1_DM LINE R1 3469 4133 -1223 1 751 344 0 135 0 chrUextra 21832411 21832507 -7172149 + (TA)n Simple_repeat Simple_repeat 2 110 0 1 751 4480 4 0 0 chrUextra 21832507 21833025 -7171631 - NOMAD_LTR LTR Gypsy 0 518 1 1 751 430 0 0 0 chrUextra 21833025 21833077 -7171579 - NOMAD_I LTR Gypsy 0 6572 6521 1 751 246 150 0 0 chrUextra 21833996 21834036 -7170620 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 22 56 0 0 chrUextra 21834134 21834170 -7170486 + AT_rich Low_complexity Low_complexity 1 36 0 1 751 3196 3 0 0 chrUextra 21834242 21834609 -7170047 - LSU-rRNA_Dme rRNA rRNA 0 3900 3534 1 751 3314 7 7 10 chrUextra 21834710 21835125 -7169531 + DM297_LTR LTR Gypsy 1 414 0 1 751 366 69 112 16 chrUextra 21835125 21835375 -7169281 + (TA)n Simple_repeat Simple_repeat 1 274 0 1 751 21 57 0 0 chrUextra 21835511 21835546 -7169110 + AT_rich Low_complexity Low_complexity 1 35 0 1 751 1150 36 0 0 chrUextra 21836002 21836141 -7168515 - PROTOP DNA P 0 4480 4342 1 751 5416 24 1 6 chrUextra 21836241 21836907 -7167749 + R1_DM LINE R1 3996 4658 -698 1 751 2695 12 70 11 chrUextra 21837007 21837645 -7167011 - CIRCE LINE Composite -2166 4190 3515 1 751 5661 9 1 1 chrUextra 21837773 21838439 -7166217 + Gypsy4_I LTR Gypsy 650 1315 -4973 1 751 555 53 0 0 chrUextra 21839130 21839205 -7165451 + (TTA)n Simple_repeat Simple_repeat 2 76 0 1 751 34 24 0 0 chrUextra 21839392 21839433 -7165223 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 2230 106 11 33 chrUextra 21840071 21840734 -7163922 + DMSAT6 Satellite Satellite 1 648 -29 1 751 2587 192 19 24 chrUextra 21840837 21841503 -7163153 + SAR_DM Satellite Satellite 1 662 -208 1 751 5436 6 0 0 chrUextra 21841639 21842269 -7162387 - LSU-rRNA_Dme rRNA rRNA -1316 2584 1955 1 751 2644 195 11 11 chrUextra 21842371 21843035 -7161621 - SAR_DM Satellite Satellite -416 1056 393 1 751 2464 22 0 3 chrUextra 21843135 21843450 -7161206 - BATUMI_I LTR Pao -347 7616 7303 1 751 2700 15 9 9 chrUextra 21843458 21843801 -7160855 + BATUMI_I LTR Pao 6469 6811 -1152 1 751 1874 0 0 0 chrUextra 21844667 21844880 -7159776 + LSU-rRNA_Dme rRNA rRNA 2420 2632 -1268 1 751 3886 2 4 0 chrUextra 21844880 21845333 -7159323 + R1_DM LINE R1 1 455 -4901 1 751 5435 16 6 3 chrUextra 21845433 21846099 -7158557 + FW_DM LINE Jockey 3806 4473 -219 1 751 821 134 35 25 chrUextra 21846201 21846400 -7158256 + NTS_DM Other Other 40 240 0 1 751 262 125 21 0 chrUextra 21846400 21846448 -7158208 + NTS_DM Other Other 1 49 -191 1 751 24 32 0 0 chrUextra 21846478 21846509 -7158147 + AT_rich Low_complexity Low_complexity 1 31 0 1 751 1056 137 30 22 chrUextra 21846534 21846766 -7157890 + NTS_DM Other Other 7 240 0 1 751 285 104 21 0 chrUextra 21846766 21846814 -7157842 + NTS_DM Other Other 1 49 -191 1 751 1899 171 9 5 chrUextra 21846965 21847631 -7157025 + SAR_DM Satellite Satellite 1 668 -539 1 751 5578 3 0 3 chrUextra 21847733 21848397 -7156259 + MDG3_I LTR Gypsy 3012 3673 -1313 1 751 5720 6 0 0 chrUextra 21848497 21849163 -7155493 - R1_DM LINE R1 -723 4633 3968 1 751 40 79 0 0 chrUextra 21849263 21849352 -7155304 + AT_rich Low_complexity Low_complexity 1 89 0 1 751 1390 106 28 190 chrUextra 21849358 21849927 -7154729 - BATUMI_I LTR Pao -7074 889 413 1 751 2870 166 33 9 chrUextra 21850030 21850693 -7153963 + SAR_DM Satellite Satellite 378 1056 -416 1 751 327 49 0 0 chrUextra 21851420 21851461 -7153195 + (GAGAA)n Simple_repeat Simple_repeat 3 43 0 1 751 3735 0 2 0 chrUextra 21851561 21851987 -7152669 + SSU-rRNA_Dme rRNA rRNA 1569 1995 0 1 751 21 89 0 0 chrUextra 21852006 21852062 -7152594 + AT_rich Low_complexity Low_complexity 1 56 0 1 751 5055 26 0 19 chrUextra 21852327 21852993 -7151663 - MDG1_I LTR Gypsy -410 6186 5534 1 751 5442 24 1 1 chrUextra 21853859 21854525 -7150131 - R1_DM LINE R1 -1489 3867 3202 1 751 262 250 12 23 chrUextra 21855055 21855141 -7149515 + (CATA)n Simple_repeat Simple_repeat 1 85 0 1 751 1112 8 8 0 chrUextra 21855602 21855736 -7148920 - 5S_DM RNA RNA 0 135 1 1 751 809 11 0 0 chrUextra 21855963 21856057 -7148599 - 5S_DM RNA RNA 0 135 42 1 751 5490 2 0 0 chrUextra 21856157 21856788 -7147868 - ROO_I LTR Pao -691 7565 6935 1 751 293 0 0 0 chrUextra 21856788 21856823 -7147833 - ROO_I LTR Pao -2618 5638 5604 1 751 5590 3 6 3 chrUextra 21856923 21857589 -7147067 - LSU-rRNA_Dme rRNA rRNA -2184 1716 1049 1 751 1126 0 8 0 chrUextra 21857689 21857821 -7146835 - SSU-rRNA_Dme rRNA rRNA -1862 133 1 1 751 32 0 0 0 chrUextra 21857953 21857985 -7146671 + AT_rich Low_complexity Low_complexity 1 32 0 1 751 28 48 0 0 chrUextra 21858313 21858355 -7146301 + AT_rich Low_complexity Low_complexity 1 42 0 1 751 2200 91 11 74 chrUextra 21858478 21859121 -7145535 - DMSAT6 Satellite Satellite 0 602 1 1 751 1695 76 104 11 chrUextra 21859255 21859534 -7145122 + DNAREP1_DM LINE Penelope 290 594 0 1 751 30 0 0 0 chrUextra 21859790 21859820 -7144836 + AT_rich Low_complexity Low_complexity 1 30 0 1 751 1591 25 0 0 chrUextra 21859987 21860191 -7144465 + FW_DM LINE Jockey 4485 4688 -4 1 751 3623 37 2 2 chrUextra 21860192 21860653 -7144003 - R1_DM LINE R1 -3966 1390 930 1 751 5614 12 0 3 chrUextra 21860753 21861419 -7143237 + Invader1_I LTR Gypsy 255 918 -2268 1 751 255 103 0 0 chrUextra 21861586 21861625 -7143031 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 751 5396 12 0 0 chrUextra 21862285 21862951 -7141705 + QUASIMODO_I LTR Gypsy 4050 4715 -1345 1 751 2551 26 129 0 chrUextra 21863051 21863717 -7140939 + PROTOP_A DNA P 260 876 -229 1 751 34 24 0 0 chrUextra 21864247 21864288 -7140368 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 4106 37 0 0 chrUextra 21864583 21865094 -7139562 - R1_DM LINE R1 -3469 1887 1377 1 751 1206 27 0 0 chrUextra 21865102 21865249 -7139407 + FW_DM LINE Jockey 1 147 -4545 1 751 4130 6 4 2 chrUextra 21865349 21865848 -7138808 + IDEFIX_LTR LTR Gypsy 95 594 0 1 751 3644 176 8 1 chrUextra 21866115 21866781 -7137875 - ROVER-I_DM LTR Gypsy -1779 4805 4136 1 751 423 218 50 39 chrUextra 21866891 21867071 -7137585 + Gypsy12_LTR LTR Gypsy 939 1120 -1216 1 751 3622 11 0 63 chrUextra 21867071 21867547 -7137109 + MICROPIA_LTR LTR Gypsy 1 446 -30 1 751 3841 26 0 2 chrUextra 21867647 21868115 -7136541 - SSU-rRNA_Dme rRNA rRNA -1528 467 1 1 751 25 31 0 0 chrUextra 21868247 21868279 -7136377 + AT_rich Low_complexity Low_complexity 1 32 0 1 751 2429 77 6 6 chrUextra 21868413 21868765 -7135891 - R1_DM LINE R1 -4982 374 23 1 751 2479 14 0 0 chrUextra 21868786 21869079 -7135577 - R1_DM LINE R1 0 5356 5064 1 751 5586 0 1 3 chrUextra 21869179 21869845 -7134811 + DMRT1B LINE R1 2524 3188 -1995 1 751 2939 171 12 8 chrUextra 21869955 21870608 -7134048 - SAR_DM Satellite Satellite -535 937 282 1 751 2532 182 9 22 chrUextra 21870711 21871356 -7133300 + SAR_DM Satellite Satellite 483 1119 -353 1 751 322 162 48 57 chrUextra 21871270 21871375 -7133281 - XDMR_DM Unknown Unknown 0 360 257 1 751 479 330 63 46 chrUextra 21871486 21872140 -7132516 - HMSBEAGLE_I LTR Gypsy -1567 4962 4298 1 751 28 48 0 0 chrUextra 21872331 21872373 -7132283 + AT_rich Low_complexity Low_complexity 1 42 0 1 751 488 119 36 0 chrUextra 21872646 21872730 -7131926 - NTS_DM Other Other -150 90 4 1 751 376 16 0 45 chrUextra 21872840 21872906 -7131750 - NTS_DM Other Other -78 162 100 1 751 3363 100 69 35 chrUextra 21873006 21873671 -7130985 - STALKER4_I LTR Gypsy -5226 1304 617 1 751 1858 14 0 0 chrUextra 21873771 21873991 -7130665 - CIRCE LINE Composite -3102 3254 3035 1 751 3233 44 0 36 chrUextra 21873992 21874436 -7130220 - CIRCE LINE Composite -3442 2914 2487 1 751 262 106 0 21 chrUextra 21875080 21875128 -7129528 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 751 258 60 78 20 chrUextra 21875150 21875201 -7129455 - HMSBEAGLE_I LTR Gypsy -6464 65 12 1 751 4760 38 35 15 chrUextra 21875301 21875966 -7128690 + R1_DM LINE R1 554 1231 -4125 1 751 5425 20 1 3 chrUextra 21876066 21876731 -7127925 + DM1731_I LTR Copia 563 1226 -2750 1 751 2707 6 34 0 chrUextra 21877174 21877496 -7127160 + Copia2_I LTR Copia 3526 3858 -304 1 751 2570 179 15 42 chrUextra 21877596 21878261 -7126395 - SAR_DM Satellite Satellite -542 930 284 1 751 2296 99 1 38 chrUextra 21878361 21879026 -7125630 + DMSAT6 Satellite Satellite 1 640 -159 1 751 1192 18 0 18 chrUextra 21879145 21879312 -7125344 - NTS_DM Other Other -39 201 38 1 751 870 9 0 27 chrUextra 21879312 21879424 -7125232 - NTS_DM Other Other -107 133 25 1 751 22 56 0 0 chrUextra 21879450 21879486 -7125170 + AT_rich Low_complexity Low_complexity 1 36 0 1 751 255 125 0 0 chrUextra 21879499 21879539 -7125117 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 246 150 0 0 chrUextra 21879582 21879622 -7125034 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 246 150 0 0 chrUextra 21879674 21879714 -7124942 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 4894 0 0 42 chrUextra 21879893 21880513 -7124143 - LSU-rRNA_Dme rRNA rRNA -3306 594 1 1 751 518 181 374 50 chrUextra 21880656 21880974 -7123682 + TART LINE telomeric 10069 10489 -3988 1 751 34 24 0 0 chrUextra 21880987 21881028 -7123628 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 365 304 60 60 chrUextra 21881497 21882068 -7122588 - BLASTOPIA_I LTR Gypsy -1859 3029 2180 1 751 5741 3 0 0 chrUextra 21882186 21882851 -7121805 + STALKER4_I LTR Gypsy 3586 4250 -2280 1 751 5580 9 0 0 chrUextra 21882951 21883616 -7121040 - HETA LINE telomeric -4827 1254 590 1 751 5358 26 0 3 chrUextra 21883716 21884381 -7120275 + R1_DM LINE R1 2203 2865 -2491 1 751 2122 4 0 88 chrUextra 21884481 21884777 -7119879 - LSU-rRNA_Dme rRNA rRNA -3630 270 1 1 751 21 95 0 0 chrUextra 21884789 21884852 -7119804 + AT_rich Low_complexity Low_complexity 1 63 0 1 751 34 24 0 0 chrUextra 21885065 21885106 -7119550 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 5765 3 0 0 chrUextra 21885246 21885911 -7118745 - STALKER4_I LTR Gypsy -2233 4297 3633 1 751 1494 33 127 0 chrUextra 21886011 21886342 -7118314 - DMCR1A LINE CR1 -198 4272 3900 1 751 2701 182 9 8 chrUextra 21886776 21887406 -7117250 - SAR_DM Satellite Satellite -647 825 195 1 751 813 94 0 0 chrUextra 21887313 21887441 -7117215 + ARS406_DM Unknown Unknown 1 128 -225 1 751 3648 126 23 0 chrUextra 21887542 21888206 -7116450 - TART_B1 LINE telomeric -8930 1724 1058 1 751 5987 3 0 3 chrUextra 21888306 21888971 -7115685 + FW_DM LINE Jockey 507 1169 -3523 1 752 2061 47 0 0 chrUextra 21889071 21889327 -7115329 - R1_DM LINE R1 -4463 893 638 1 752 1299 60 6 0 chrUextra 21889325 21889492 -7115164 - R1_DM LINE R1 -5188 168 1 1 752 1015 26 0 0 chrUextra 21889525 21889639 -7115017 - R1_DM LINE R1 0 5356 5243 1 752 855 10 0 0 chrUextra 21889636 21889736 -7114920 - R1_DM LINE R1 -290 5066 4967 1 752 3175 170 32 11 chrUextra 21889836 21890501 -7114155 + SAR_DM Satellite Satellite 378 1056 -416 1 752 2423 94 11 51 chrUextra 21890603 21891266 -7113390 - DMSAT6 Satellite Satellite -109 635 1 1 752 1620 0 0 0 chrUextra 21891714 21892031 -7112625 + (CAAGA)n Simple_repeat Simple_repeat 1 317 0 1 752 6049 1 0 0 chrUextra 21892131 21892796 -7111860 - STALKER4_I LTR Gypsy -4498 2032 1368 1 752 4958 9 7 0 chrUextra 21892896 21893444 -7111212 + BS LINE Jockey 4573 5124 -2 1 752 1726 0 0 0 chrUextra 21893661 21893870 -7110786 + HMSBEAGLE_I LTR Gypsy 579 787 -5742 1 752 974 29 52 12 chrUextra 21893882 21894054 -7110602 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 752 2363 4 15 0 chrUextra 21894054 21894326 -7110330 + HMSBEAGLE_I LTR Gypsy 969 1244 -5285 1 752 5073 3 0 3 chrUextra 21894426 21895001 -7109655 - STALKER4_I LTR Gypsy -4687 1843 1271 1 752 736 0 0 0 chrUextra 21894999 21895080 -7109576 - STALKER4_I LTR Gypsy -5367 1163 1083 1 752 3300 169 9 8 chrUextra 21895191 21895843 -7108813 + SAR_DM Satellite Satellite 402 1054 -418 1 752 1723 20 0 5 chrUextra 21895956 21896161 -7108495 - NTS_DM Other Other -36 204 1 1 752 1882 21 17 17 chrUextra 21896161 21896401 -7108255 - NTS_DM Other Other 0 240 1 1 752 1694 19 18 18 chrUextra 21896401 21896621 -7108035 - NTS_DM Other Other 0 240 21 1 752 3030 172 46 12 chrUextra 21896726 21897374 -7107282 - SAR_DM Satellite Satellite -434 1038 369 1 752 4519 15 0 2 chrUextra 21897486 21898029 -7106627 + DM297_I LTR Gypsy 5626 6167 0 1 752 1005 25 16 8 chrUextra 21898030 21898151 -7106505 + DM297_LTR LTR Gypsy 1 122 -292 1 752 5997 1 0 3 chrUextra 21898251 21898916 -7105740 + R1_DM LINE R1 3015 3677 -1679 1 752 5068 72 30 0 chrUextra 21899016 21899681 -7104975 - TART_B1 LINE telomeric -7241 3413 2729 1 752 3512 162 8 8 chrUextra 21899781 21900446 -7104210 + SAR_DM Satellite Satellite 373 1037 -435 1 752 5928 3 0 0 chrUextra 21900546 21901211 -7103445 - ROO_I LTR Pao -2951 5305 4641 1 752 2393 45 0 10 chrUextra 21901683 21901974 -7102682 - QUASIMODO_LTR LTR Gypsy 0 658 371 1 752 2746 90 4 31 chrUextra 21902326 21902739 -7101917 - QUASIMODO_LTR LTR Gypsy 0 658 130 1 752 991 79 6 18 chrUextra 21902841 21903506 -7101150 + RSP Satellite Satellite 1 657 0 1 752 2564 97 36 12 chrUextra 21903606 21904268 -7100388 - DMSAT6 Satellite Satellite -90 678 1 1 752 5758 29 6 0 chrUextra 21904371 21905036 -7099620 + Copia2_I LTR Copia 1943 2611 -1551 1 752 4902 33 3 2 chrUextra 21905136 21905713 -7098943 - R1_DM LINE R1 -372 4984 4407 1 752 592 15 0 0 chrUextra 21905733 21905801 -7098855 - R1_DM LINE R1 -1074 4282 4215 1 752 5761 29 0 0 chrUextra 21905901 21906566 -7098090 - R1_DM LINE R1 -1663 3693 3029 1 752 6102 1 0 0 chrUextra 21906666 21907331 -7097325 + QUASIMODO_I LTR Gypsy 2081 2745 -3315 1 752 5479 35 1 6 chrUextra 21907431 21908096 -7096560 + TC1-2_DM DNA Tc1 29 690 -954 1 752 1620 0 0 0 chrUextra 21908196 21908498 -7096158 + (GAGAA)n Simple_repeat Simple_repeat 1 302 0 1 752 4673 4 2 2 chrUextra 21909109 21909626 -7095030 + NOMAD_LTR LTR Gypsy 1 517 -1 1 752 21 89 0 0 chrUextra 21909815 21909871 -7094785 + AT_rich Low_complexity Low_complexity 1 56 0 1 752 23 68 0 0 chrUextra 21909909 21909953 -7094703 + AT_rich Low_complexity Low_complexity 1 44 0 1 752 26 30 0 0 chrUextra 21909999 21910032 -7094624 + AT_rich Low_complexity Low_complexity 1 33 0 1 752 988 16 0 110 chrUextra 21910491 21910627 -7094029 + LSU-rRNA_Dme rRNA rRNA 2512 2632 -1268 1 752 4788 6 4 0 chrUextra 21910627 21911155 -7093501 + R1_DM LINE R1 1 530 -4826 1 752 4230 2 0 2 chrUextra 21911256 21911713 -7092943 - R2_DM LINE R2 -3149 458 3 1 752 1966 0 0 0 chrUextra 21911711 21911921 -7092735 - LSU-rRNA_Dme rRNA rRNA -1345 2555 2346 1 752 5768 11 1 1 chrUextra 21912021 21912686 -7091970 + QUASIMODO_I LTR Gypsy 1157 1821 -4239 1 752 6104 6 0 0 chrUextra 21912786 21913450 -7091206 + Gypsy4_I LTR Gypsy 1566 2229 -4059 1 752 534 119 36 0 chrUextra 21913701 21913785 -7090871 + NTS_DM Other Other 4 90 -150 1 752 28 48 0 0 chrUextra 21914058 21914100 -7090556 + AT_rich Low_complexity Low_complexity 1 42 0 1 752 688 0 13 0 chrUextra 21914138 21914216 -7090440 - NOMAD_LTR LTR Gypsy 0 518 440 1 752 6011 1 0 1 chrUextra 21914316 21914981 -7089675 + R1_DM LINE R1 2879 3542 -1814 1 752 4154 27 67 2 chrUextra 21915081 21915724 -7088932 - CIRCE LINE Composite -2909 3447 2763 1 752 4798 57 47 16 chrUextra 21915846 21916511 -7088145 + R1_DM LINE R1 343 1027 -4329 1 752 3139 172 5 23 chrUextra 21916611 21917276 -7087380 - SAR_DM Satellite Satellite -615 857 205 1 752 3849 41 51 2 chrUextra 21917376 21917863 -7086793 - R1_DM LINE R1 -4125 1231 721 1 752 1323 48 6 12 chrUextra 21917874 21918041 -7086615 - R1_DM LINE R1 -4955 401 236 1 752 642 14 0 0 chrUextra 21918141 21918211 -7086445 - NTS_DM Other Other -170 70 1 1 752 1878 21 17 17 chrUextra 21918211 21918451 -7086205 - NTS_DM Other Other 0 240 1 1 752 1899 17 17 17 chrUextra 21918451 21918691 -7085965 - NTS_DM Other Other 0 240 1 1 752 726 36 35 35 chrUextra 21918691 21918806 -7085850 - NTS_DM Other Other 0 240 126 1 752 2233 181 40 8 chrUextra 21918906 21919549 -7085107 + SAR_DM Satellite Satellite 1 663 -590 1 752 4970 48 48 8 chrUextra 21919671 21920336 -7084320 + R1_DM LINE R1 536 1227 -4129 1 752 4373 2 0 0 chrUextra 21920436 21920908 -7083748 + Gypsy4_I LTR Gypsy 5817 6288 0 1 752 1475 16 5 57 chrUextra 21920908 21921101 -7083555 + Gypsy4_LTR LTR Gypsy 1 183 -104 1 752 2016 54 19 4 chrUextra 21921201 21921462 -7083194 + DIVER2_I LTR Pao 2178 2442 -1705 1 752 688 0 0 0 chrUextra 21922138 21922213 -7082443 - Copia2_LTR_DM LTR Copia -95 103 29 1 752 3791 7 5 0 chrUextra 21922213 21922628 -7082028 - Invader1_LTR LTR Gypsy 0 423 7 1 752 632 40 0 0 chrUextra 21922731 21922806 -7081850 - DMCR1A LINE CR1 -1142 3328 3254 1 752 2999 52 0 0 chrUextra 21922804 21923171 -7081485 - FW_DM LINE Jockey -4233 459 93 1 752 730 35 0 0 chrUextra 21923496 21923582 -7081074 + BATUMI_I LTR Pao 7199 7284 -679 1 752 2988 87 105 37 chrUextra 21923582 21924143 -7080513 + BATUMI_I LTR Pao 1 599 -7364 1 752 1113 322 14 14 chrUextra 21924481 21924922 -7079734 + Invader6_I LTR Gypsy 1726 2166 -1933 1 752 3084 180 12 14 chrUextra 21925791 21926456 -7078200 - SAR_DM Satellite Satellite -553 919 256 1 752 5883 18 1 1 chrUextra 21926556 21927221 -7077435 - R2_DM LINE R2 -646 2961 2297 1 752 5930 1 0 0 chrUextra 21927321 21927986 -7076670 + ROO_I LTR Pao 4601 5265 -2991 1 752 5995 16 0 1 chrUextra 21928086 21928751 -7075905 + MAX_I LTR Pao 6086 6749 -1165 1 752 6019 0 0 0 chrUextra 21928851 21929516 -7075140 - ROO_I LTR Pao -3122 5134 4470 1 752 434 36 18 0 chrUextra 21929616 21929671 -7074985 + R1_DM LINE R1 5301 5356 0 1 752 4536 57 9 3 chrUextra 21929704 21930281 -7074375 + R1_DM LINE R1 1 580 -4776 1 752 1079 177 56 17 chrUextra 21930381 21931015 -7073641 + SAR_DM Satellite Satellite 1 658 -1040 1 752 5723 21 0 1 chrUextra 21931148 21931811 -7072845 + STALKER4_I LTR Gypsy 2416 3077 -3453 1 752 1057 23 0 8 chrUextra 21931911 21932043 -7072613 - NTS_DM Other Other -72 168 38 1 752 936 9 0 27 chrUextra 21932043 21932155 -7072501 - NTS_DM Other Other -107 133 25 1 752 1350 18 0 6 chrUextra 21932208 21932373 -7072283 - NTS_DM Other Other -39 201 38 1 752 936 9 0 27 chrUextra 21932373 21932485 -7072171 - NTS_DM Other Other -107 133 25 1 752 22 56 0 0 chrUextra 21932511 21932547 -7072109 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 6059 0 3 5 chrUextra 21932676 21933341 -7071315 - SSU-rRNA_Dme rRNA rRNA -216 1779 1116 1 752 6009 6 0 1 chrUextra 21933444 21934106 -7070550 + R1_DM LINE R1 4182 4842 -514 1 752 1995 4 17 13 chrUextra 21934222 21934461 -7070195 - NTS_DM Other Other 0 240 1 1 752 1878 21 17 17 chrUextra 21934461 21934701 -7069955 - NTS_DM Other Other 0 240 1 1 752 1210 18 24 24 chrUextra 21934701 21934871 -7069785 - NTS_DM Other Other 0 240 71 1 752 4809 98 2 2 chrUextra 21934971 21935616 -7069040 - R1_DM LINE R1 -3613 1743 1099 1 752 1803 0 22 14 chrUextra 21935736 21935958 -7068698 + NTS_DM Other Other 17 240 0 1 752 2006 0 17 13 chrUextra 21935958 21936197 -7068459 + NTS_DM Other Other 1 240 0 1 752 1657 0 0 0 chrUextra 21936197 21936381 -7068275 + NTS_DM Other Other 1 184 -56 1 752 2307 107 15 16 chrUextra 21936501 21937166 -7067490 - DMSAT6 Satellite Satellite -58 664 1 1 752 5652 38 5 0 chrUextra 21937266 21937931 -7066725 + R1_DM LINE R1 1397 2064 -3292 1 752 3312 161 12 15 chrUextra 21938033 21938696 -7065960 + SAR_DM Satellite Satellite 342 1002 -470 1 752 2342 0 8 0 chrUextra 21938796 21939055 -7065601 - R1_DM LINE R1 -5095 261 1 1 752 3800 0 0 0 chrUextra 21939055 21939461 -7065195 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2227 1 752 1827 176 90 51 chrUextra 21939561 21940029 -7064627 - TAHRE LINE telomeric -2934 7529 7044 1 752 1426 86 0 0 chrUextra 21940028 21940226 -7064430 - TAHRE LINE telomeric -12 10451 10254 1 752 3021 187 18 9 chrUextra 21940326 21940991 -7063665 + SAR_DM Satellite Satellite 180 850 -622 1 752 5911 19 0 0 chrUextra 21941091 21941756 -7062900 + DMRT1A LINE R1 3618 4282 -901 1 752 3060 185 14 6 chrUextra 21941857 21942500 -7062156 - SAR_DM Satellite Satellite -633 839 192 1 752 796 103 0 0 chrUextra 21942404 21942521 -7062135 + ARS406_DM Unknown Unknown 1 117 -236 1 752 1041 95 0 5 chrUextra 21942624 21942828 -7061828 + (ACATG)n Simple_repeat Simple_repeat 1 203 0 1 752 1065 90 0 0 chrUextra 21942828 21943005 -7061651 + (CAAGA)n Simple_repeat Simple_repeat 4 180 0 1 752 1125 85 0 14 chrUextra 21943005 21943286 -7061370 + (ACATG)n Simple_repeat Simple_repeat 1 277 0 1 752 5924 1 1 1 chrUextra 21943386 21944051 -7060605 - R1_DM LINE R1 -3896 1460 796 1 752 4599 86 5 3 chrUextra 21944152 21944816 -7059840 + STALKER4_I LTR Gypsy 5769 6433 -97 1 752 1417 0 0 0 chrUextra 21944916 21945067 -7059589 + LSU-rRNA_Dme rRNA rRNA 3746 3896 -4 1 752 268 196 0 19 chrUextra 21945175 21945227 -7059429 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 268 196 0 19 chrUextra 21945267 21945319 -7059337 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 268 196 0 19 chrUextra 21945359 21945411 -7059245 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 278 176 0 19 chrUextra 21945442 21945494 -7059162 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 22 56 0 0 chrUextra 21945507 21945543 -7059113 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 3471 30 0 27 chrUextra 21945681 21946095 -7058561 + CIRCE LINE Composite 1483 1885 -4471 1 752 549 315 49 20 chrUextra 21946089 21946335 -7058321 + Gypsy12_I LTR Gypsy 3823 4075 -1471 1 752 1560 0 0 43 chrUextra 21946162 21946346 -7058310 + CIRCE LINE Composite 1884 2059 -4297 1 752 4384 75 49 16 chrUextra 21946446 21947083 -7057573 - MDG1_I LTR Gypsy -5938 658 1 1 752 6048 0 0 1 chrUextra 21947211 21947876 -7056780 + R1_DM LINE R1 1250 1913 -3443 1 752 1047 131 59 20 chrUextra 21947976 21948178 -7056478 - MDG1_I LTR Gypsy -6386 210 1 1 752 2035 101 10 3 chrUextra 21948178 21948466 -7056190 - MDG1_LTR LTR Gypsy -30 412 123 1 752 372 88 0 0 chrUextra 21948478 21948535 -7056121 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 752 547 51 103 0 chrUextra 21948563 21948641 -7056015 + DM176_I LTR Gypsy 2360 2445 -3975 1 752 5726 26 3 1 chrUextra 21948741 21949406 -7055250 + R1_DM LINE R1 3188 3853 -1503 1 752 3189 181 15 9 chrUextra 21949507 21950166 -7054490 + SAR_DM Satellite Satellite 252 914 -558 1 752 3661 0 0 0 chrUextra 21950271 21950661 -7053995 + LSU-rRNA_Dme rRNA rRNA 3511 3900 0 1 752 268 196 0 19 chrUextra 21950762 21950814 -7053842 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 245 216 0 19 chrUextra 21950854 21950906 -7053750 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 5650 42 0 0 chrUextra 21951036 21951701 -7052955 - R1_DM LINE R1 -3448 1908 1244 1 752 437 20 0 0 chrUextra 21951801 21951850 -7052806 - NTS_DM Other Other -191 49 1 1 752 1872 21 17 21 chrUextra 21951850 21952091 -7052565 - NTS_DM Other Other 0 240 1 1 752 1506 25 20 20 chrUextra 21952091 21952294 -7052362 - NTS_DM Other Other 0 240 38 1 752 876 0 0 0 chrUextra 21952294 21952390 -7052266 - NTS_DM Other Other -107 133 38 1 752 609 13 13 0 chrUextra 21952390 21952466 -7052190 - NTS_DM Other Other -107 133 57 1 752 779 123 24 55 chrUextra 21952608 21952772 -7051884 - ROVER-I_DM LTR Gypsy -6295 289 131 1 752 433 165 13 0 chrUextra 21952865 21952944 -7051712 - ROVER-I_DM LTR Gypsy -6504 80 1 1 752 1494 108 94 35 chrUextra 21952944 21953231 -7051425 - ROVER-LTR_DM LTR Gypsy 0 367 64 1 752 5152 50 1 18 chrUextra 21953331 21953996 -7050660 + R1_DM LINE R1 209 862 -4494 1 752 1390 11 0 11 chrUextra 21954861 21955029 -7049627 + HMSBEAGLE_I LTR Gypsy 629 796 -5733 1 752 974 29 52 12 chrUextra 21955029 21955201 -7049455 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 752 2881 0 9 0 chrUextra 21955201 21955526 -7049130 + HMSBEAGLE_I LTR Gypsy 969 1296 -5233 1 752 4648 68 0 3 chrUextra 21955626 21956280 -7048376 + BATUMI_I LTR Pao 5902 6796 -1118 1 752 6009 1 0 0 chrUextra 21956391 21957056 -7047600 - ROO_I LTR Pao -4260 3996 3332 1 752 750 89 0 10 chrUextra 21957160 21957262 -7047394 - DNAREP1_DM LINE Penelope -493 101 1 1 752 1450 156 50 203 chrUextra 21957288 21957770 -7046886 + HOBO DNA hAT 1 408 -2608 1 752 317 115 66 0 chrUextra 21957760 21957821 -7046835 + HOBO DNA hAT 2337 2401 -615 1 752 1215 15 0 0 chrUextra 21958163 21958298 -7046358 + 5S_DM RNA RNA 1 135 0 1 752 415 0 0 0 chrUextra 21958539 21958586 -7046070 + 5S_DM RNA RNA 1 47 -88 1 752 4777 22 0 40 chrUextra 21958686 21959075 -7045581 - DM176_I LTR Gypsy -5517 903 528 1 752 208 28 26 53 chrUextra 21959075 21959113 -7045543 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1 752 4777 22 0 40 chrUextra 21959113 21959351 -7045305 - DM176_I LTR Gypsy -5893 527 301 1 752 5388 45 45 1 chrUextra 21959451 21960116 -7044540 - R1_DM LINE R1 -3615 1741 1048 1 752 5402 38 5 12 chrUextra 21960981 21961646 -7043010 - BATUMI_I LTR Pao -5583 2380 1721 1 752 2226 0 4 4 chrUextra 21961746 21961990 -7042666 + SSU-rRNA_Dme rRNA rRNA 1752 1995 0 1 752 4245 41 4 6 chrUextra 21962511 21963176 -7041480 + R1_DM LINE R1 2670 3366 -1990 1 752 3288 163 19 11 chrUextra 21963276 21963941 -7040715 + SAR_DM Satellite Satellite 180 850 -622 1 752 6060 0 6 0 chrUextra 21964041 21964706 -7039950 + ROO_I LTR Pao 7331 7999 -257 1 752 5385 17 3 35 chrUextra 21964807 21965471 -7039185 - G_DM LINE Jockey -3 4343 3701 1 752 6197 0 1 0 chrUextra 21965571 21966236 -7038420 + SSU-rRNA_Dme rRNA rRNA 497 1162 -833 1 752 6132 6 0 0 chrUextra 21966336 21967001 -7037655 - Gypsy4_I LTR Gypsy -2296 3992 3328 1 752 525 83 135 0 chrUextra 21967885 21967981 -7036675 - TART_B1 LINE telomeric -8315 2339 2231 1 752 4450 4 0 2 chrUextra 21967995 21968483 -7036173 - DMRT1B LINE R1 0 5183 4697 1 752 447 19 0 0 chrUextra 21968479 21968531 -7036125 - DMRT1B LINE R1 -446 4737 4686 1 752 6214 0 0 1 chrUextra 21969396 21970061 -7034595 - SSU-rRNA_Dme rRNA rRNA -1108 887 224 1 752 1865 5 5 9 chrUextra 21970161 21970383 -7034273 - QUASIMODO_LTR LTR Gypsy -437 221 1 1 752 3659 9 14 0 chrUextra 21970383 21970826 -7033830 - QUASIMODO_I LTR Gypsy 0 6060 5612 1 752 5892 16 0 0 chrUextra 21970926 21971591 -7033065 - R1_DM LINE R1 -819 4537 3873 1 752 30 27 0 0 chrUextra 21972125 21972162 -7032494 + AT_rich Low_complexity Low_complexity 1 37 0 1 752 5741 30 0 0 chrUextra 21972456 21973121 -7031535 - FW_DM LINE Jockey -3909 783 119 1 752 2321 96 22 46 chrUextra 21973221 21973886 -7030770 + DMSAT6 Satellite Satellite 1 649 -147 1 752 4394 56 47 20 chrUextra 21973996 21974651 -7030005 + STALKER4_I LTR Gypsy 919 1591 -4939 1 752 3229 152 27 23 chrUextra 21974751 21975416 -7029240 + SAR_DM Satellite Satellite 301 968 -504 1 752 3298 179 8 8 chrUextra 21975516 21976181 -7028475 - SAR_DM Satellite Satellite -558 914 250 1 752 6032 5 0 0 chrUextra 21976281 21976946 -7027710 - R1_DM LINE R1 -1663 3693 3029 1 752 3024 179 8 11 chrUextra 21977046 21977689 -7026967 - SAR_DM Satellite Satellite -640 832 192 1 752 821 93 0 8 chrUextra 21977592 21977711 -7026945 + ARS406_DM Unknown Unknown 1 118 -235 1 752 1789 15 0 0 chrUextra 21977811 21978009 -7026647 + Invader1_I LTR Gypsy 1484 1681 -1505 1 752 4335 2 2 0 chrUextra 21978011 21978476 -7026180 + Invader1_I LTR Gypsy 1819 2284 -902 1 752 5774 12 1 3 chrUextra 21978579 21979241 -7025415 - R1_DM LINE R1 -1220 4136 3476 1 752 2382 59 216 0 chrUextra 21979341 21979698 -7024958 + PROTOP DNA P 4038 4471 -9 1 752 1989 0 0 0 chrUextra 21979787 21980006 -7024650 + Copia_I LTR Copia 36 254 -4339 1 752 1064 8 52 0 chrUextra 21980106 21980240 -7024416 - QUASIMODO_LTR LTR Gypsy -517 141 1 1 752 4433 4 6 0 chrUextra 21980240 21980771 -7023885 - QUASIMODO_I LTR Gypsy 0 6060 5527 1 752 3503 169 6 8 chrUextra 21980871 21981535 -7023121 - SAR_DM Satellite Satellite -439 1033 371 1 752 5916 15 0 3 chrUextra 21981636 21982301 -7022355 + G_DM LINE Jockey 2895 3557 -789 1 752 4365 18 4 0 chrUextra 21982401 21982903 -7021753 + IDEFIX_LTR LTR Gypsy 91 594 0 1 752 3147 186 8 6 chrUextra 21983947 21984596 -7020060 - SAR_DM Satellite Satellite -396 1076 427 1 752 1793 21 17 29 chrUextra 21984696 21984937 -7019719 - NTS_DM Other Other -2 238 1 1 752 1899 17 17 17 chrUextra 21984937 21985177 -7019479 - NTS_DM Other Other 0 240 1 1 752 1264 33 22 22 chrUextra 21985177 21985361 -7019295 - NTS_DM Other Other 0 240 57 1 752 3206 41 31 7 chrUextra 21985461 21985876 -7018780 - HETA LINE telomeric -2328 3753 3329 1 752 2004 32 0 4 chrUextra 21985878 21986126 -7018530 + NINJA_I LTR Pao 5579 5825 -186 1 752 3351 164 12 9 chrUextra 21986227 21986890 -7017766 + SAR_DM Satellite Satellite 369 1033 -439 1 752 5598 21 0 5 chrUextra 21986991 21987656 -7017000 - Copia_I LTR Copia -611 3982 3321 1 752 6101 1 0 0 chrUextra 21987756 21988421 -7016235 + FW_DM LINE Jockey 3833 4497 -195 1 752 3218 169 12 12 chrUextra 21988521 21989168 -7015488 + SAR_DM Satellite Satellite 430 1076 -396 1 752 5673 36 0 3 chrUextra 21989286 21989951 -7014705 - R1_DM LINE R1 -3456 1900 1238 1 752 2813 195 36 6 chrUextra 21990055 21990716 -7013940 - SAR_DM Satellite Satellite -535 937 257 1 752 6108 3 0 0 chrUextra 21991581 21992246 -7012410 + ROO_I LTR Pao 6789 7453 -803 1 752 4346 48 78 1 chrUextra 21992346 21993011 -7011645 - PROTOP DNA P -3727 753 108 1 752 2053 293 17 17 chrUextra 21993114 21993771 -7010885 + MICROPIA_I LTR Gypsy 2540 3196 -1280 1 752 424 246 118 100 chrUextra 21994022 21994302 -7010354 - Invader1_LTR LTR Gypsy -55 368 84 1 752 6042 0 1 0 chrUextra 21994641 21995306 -7009350 - ROO_I LTR Pao -5932 2324 1659 1 752 5840 27 1 0 chrUextra 21995406 21996071 -7008585 + DMCR1A LINE CR1 2225 2890 -1580 1 752 382 213 21 0 chrUextra 21996188 21996282 -7008374 - XDMR_DM Unknown Unknown -7 353 258 1 752 1081 192 29 14 chrUextra 21996293 21996800 -7007856 + SAR_DM Satellite Satellite 1 514 -680 1 752 2987 222 5 9 chrUextra 21996936 21997596 -7007060 + G_DM LINE Jockey 2582 3238 -1108 1 752 262 250 12 23 chrUextra 21998183 21998269 -7006387 + (CATA)n Simple_repeat Simple_repeat 1 85 0 1 752 3277 178 6 8 chrUextra 21998467 21999131 -7005525 + SAR_DM Satellite Satellite 195 857 -615 1 752 246 164 0 35 chrUextra 21999231 21999288 -7005368 + XDMR_DM Unknown Unknown 297 351 -9 1 752 2800 186 14 36 chrUextra 21999238 21999896 -7004760 - SAR_DM Satellite Satellite -382 1090 448 1 752 5677 29 0 0 chrUextra 22000005 22000661 -7003995 + DMRT1A LINE R1 2030 2685 -2498 1 752 3232 178 9 6 chrUextra 22000761 22001416 -7003240 + SAR_DM Satellite Satellite 247 903 -569 1 752 2464 159 142 21 chrUextra 22001525 22002189 -7002467 - TART LINE telomeric -4745 9732 9025 1 752 5665 32 0 0 chrUextra 22002291 22002953 -7001703 + R1_DM LINE R1 2613 3274 -2082 1 752 2323 93 6 53 chrUextra 22003053 22003717 -7000939 + DMSAT6 Satellite Satellite 1 632 -85 1 752 5663 29 0 0 chrUextra 22003817 22004481 -7000175 + MDG1_I LTR Gypsy 3203 3866 -2730 1 752 5949 9 0 0 chrUextra 22004581 22005245 -6999411 - QUASIMODO_I LTR Gypsy -2513 3547 2884 1 752 5861 14 1 3 chrUextra 22005345 22006009 -6998647 + DMRT1A LINE R1 3157 3819 -1364 1 752 5542 31 3 18 chrUextra 22006109 22006771 -6997885 - CIRCE LINE Composite -3099 3257 2606 1 752 3282 172 12 9 chrUextra 22006873 22007537 -6997119 + SAR_DM Satellite Satellite 341 1006 -466 1 752 3278 178 6 6 chrUextra 22007637 22008297 -6996359 + SAR_DM Satellite Satellite 220 879 -593 1 752 3282 170 11 9 chrUextra 22008401 22009065 -6995591 - SAR_DM Satellite Satellite -404 1068 404 1 752 897 85 0 0 chrUextra 22009929 22010059 -6994597 - ARS406_DM Unknown Unknown -223 130 1 1 752 2950 180 12 9 chrUextra 22009953 22010593 -6994063 + SAR_DM Satellite Satellite 180 821 -651 1 752 5442 47 0 11 chrUextra 22010694 22011357 -6993299 + R1_DM LINE R1 1213 1868 -3488 1 752 492 18 0 0 chrUextra 22011457 22011514 -6993142 + (CAATA)n Simple_repeat Simple_repeat 1 57 0 1 752 398 43 0 0 chrUextra 22012221 22012268 -6992388 - R1_DM LINE R1 -67 5289 5243 1 752 5369 20 2 10 chrUextra 22012265 22012885 -6991771 - R1_DM LINE R1 -290 5066 4452 1 752 2985 166 12 22 chrUextra 22012985 22013627 -6991029 - SAR_DM Satellite Satellite -645 827 192 1 752 785 102 0 8 chrUextra 22013530 22013649 -6991007 + ARS406_DM Unknown Unknown 1 118 -235 1 752 3414 3 0 0 chrUextra 22013749 22014120 -6990536 + R1_DM LINE R1 4986 5356 0 1 752 585 0 0 0 chrUextra 22014133 22014196 -6990460 + R1_DM LINE R1 5294 5356 0 1 752 2041 5 0 0 chrUextra 22014194 22014413 -6990243 + LSU-rRNA_Dme rRNA rRNA 2640 2858 -1042 1 752 612 23 11 11 chrUextra 22014513 22014602 -6990054 + ACCORD2_I LTR Gypsy 1686 1774 -5438 1 752 1148 83 21 103 chrUextra 22014613 22014855 -6989801 + ACCORD2_I LTR Gypsy 1553 1774 -5438 1 752 661 69 0 0 chrUextra 22014848 22014933 -6989723 + ACCORD2_I LTR Gypsy 7122 7206 -6 1 752 1857 23 0 18 chrUextra 22014933 22015151 -6989505 + ACCORD2_LTR LTR Gypsy 1 214 -1 1 752 230 0 0 0 chrUextra 22015152 22015177 -6989479 + R1_DM LINE R1 2422 2446 -2910 1 752 4448 29 0 0 chrUextra 22015277 22015800 -6988856 + R1_DM LINE R1 2620 3142 -2214 1 752 1205 22 0 0 chrUextra 22015803 22015941 -6988715 + R1_DM LINE R1 3275 3412 -1944 1 752 4706 49 60 0 chrUextra 22016041 22016655 -6988001 - PROTOP DNA P -3829 651 1 1 752 384 123 0 17 chrUextra 22016655 22016705 -6987951 + Invader1_I LTR Gypsy 1899 1947 -1239 1 752 6011 0 1 0 chrUextra 22016805 22017469 -6987187 - R1_DM LINE R1 -2185 3171 2507 1 752 1007 30 0 7 chrUextra 22018333 22018469 -6986187 + NTS_DM Other Other 67 201 -39 1 752 936 9 0 27 chrUextra 22018521 22018633 -6986023 + NTS_DM Other Other 25 133 -107 1 752 1350 18 0 6 chrUextra 22018633 22018798 -6985858 + NTS_DM Other Other 38 201 -39 1 752 21 57 0 0 chrUextra 22018798 22018833 -6985823 + AT_rich Low_complexity Low_complexity 1 35 0 1 752 898 9 9 27 chrUextra 22018859 22018970 -6985686 + NTS_DM Other Other 25 133 -107 1 752 249 0 0 0 chrUextra 22018970 22018997 -6985659 + NTS_DM Other Other 38 64 -176 1 752 826 10 0 30 chrUextra 22019861 22019960 -6984696 - NTS_DM Other Other -120 120 25 1 752 22 56 0 0 chrUextra 22019986 22020022 -6984634 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 278 176 0 19 chrUextra 22020035 22020087 -6984569 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 268 196 0 19 chrUextra 22020119 22020171 -6984485 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 268 196 0 19 chrUextra 22020211 22020263 -6984393 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 268 196 0 19 chrUextra 22020303 22020355 -6984301 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 639 0 0 0 chrUextra 22020456 22020525 -6984131 - LSU-rRNA_Dme rRNA rRNA 0 3900 3832 1 753 659 0 0 0 chrUextra 22021389 22021459 -6983197 - NTS_DM Other Other -170 70 1 1 753 1917 8 17 21 chrUextra 22021459 22021700 -6982956 - NTS_DM Other Other 0 240 1 1 753 1810 30 21 17 chrUextra 22021700 22021939 -6982717 - NTS_DM Other Other 0 240 1 1 753 726 27 35 35 chrUextra 22021939 22022053 -6982603 - NTS_DM Other Other 0 240 127 1 753 231 171 0 0 chrUextra 22022154 22022195 -6982461 + DNAREP1_DM LINE Penelope 554 594 0 1 753 26 50 0 0 chrUextra 22022247 22022287 -6982369 + AT_rich Low_complexity Low_complexity 1 40 0 1 753 1499 28 0 6 chrUextra 22022917 22023099 -6981557 - NTS_DM Other Other -59 181 1 1 753 1899 17 17 17 chrUextra 22023099 22023339 -6981317 - NTS_DM Other Other 0 240 1 1 753 1506 25 20 20 chrUextra 22023339 22023542 -6981114 - NTS_DM Other Other 0 240 38 1 753 310 0 0 0 chrUextra 22023542 22023581 -6981075 - NTS_DM Other Other -107 133 95 1 753 27 29 0 0 chrUextra 22023710 22023744 -6980912 + AT_rich Low_complexity Low_complexity 1 34 0 1 753 21 0 0 0 chrUextra 22024260 22024281 -6980375 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 252 86 0 0 chrUextra 22024306 22024341 -6980315 + NINJA_LTR LTR Pao 1 35 -282 1 753 6145 0 0 3 chrUextra 22024445 22025109 -6979547 + LSU-rRNA_Dme rRNA rRNA 2420 3081 -819 1 753 5963 11 0 0 chrUextra 22025209 22025873 -6978783 - R1_DM LINE R1 -3285 2071 1408 1 753 445 8 0 133 chrUextra 22026487 22026637 -6978019 + (CAAAAA)n Simple_repeat Simple_repeat 3 132 0 1 753 1970 42 0 0 chrUextra 22026737 22026975 -6977681 + PROTOP DNA P 139 376 -4104 1 753 2408 15 0 0 chrUextra 22026975 22027241 -6977415 - Invader2_LTR LTR Gypsy 0 266 1 1 753 1185 0 0 69 chrUextra 22027241 22027401 -6977255 - Invader2_I LTR Gypsy 0 4592 4444 1 753 2928 177 47 21 chrUextra 22027504 22028162 -6976494 + SAR_DM Satellite Satellite 280 954 -518 1 753 5295 42 1 23 chrUextra 22028265 22028929 -6975727 + BATUMI_I LTR Pao 1258 1907 -6056 1 753 1448 62 0 4 chrUextra 22029029 22029507 -6975149 + (ACATG)n Simple_repeat Simple_repeat 1 475 0 1 753 1550 6 0 6 chrUextra 22029513 22029693 -6974963 + (CAAGA)n Simple_repeat Simple_repeat 1 179 0 1 753 5730 24 0 1 chrUextra 22029793 22030457 -6974199 + DMRT1B LINE R1 2526 3188 -1995 1 753 4900 29 14 2 chrUextra 22030599 22031221 -6973435 - IDEFIX_I LTR Gypsy -71 5557 4928 1 753 5662 39 0 0 chrUextra 22031321 22031985 -6972671 + DIVER_I LTR Pao 3309 3972 -1671 1 753 5412 20 66 8 chrUextra 22032085 22032749 -6971907 - FW_DM LINE Jockey -173 4519 3817 1 753 1843 182 8 5 chrUextra 22032873 22033511 -6971145 - SAR_DM Satellite Satellite -558 640 1 1 753 369 304 39 60 chrUextra 22033614 22033848 -6970808 - Gypsy12_LTR LTR Gypsy -1429 907 679 1 753 882 229 20 61 chrUextra 22033942 22034189 -6970467 - Gypsy12_LTR LTR Gypsy -1803 533 297 1 753 389 22 0 0 chrUextra 22034232 22034277 -6970379 + PROTOP_B DNA P 1 45 -1108 1 753 4088 27 68 1 chrUextra 22034377 22035013 -6969643 - CIRCE LINE Composite -2916 3440 2763 1 753 387 0 0 0 chrUextra 22035141 22035184 -6969472 + (TTCTC)n Simple_repeat Simple_repeat 2 44 0 1 753 1620 0 0 0 chrUextra 22035191 22035443 -6969213 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 753 5966 9 0 0 chrUextra 22035905 22036569 -6968087 - R1_DM LINE R1 -2348 3008 2345 1 753 3435 10 5 0 chrUextra 22036669 22037056 -6967600 + R1_DM LINE R1 4968 5356 0 1 753 1360 85 16 0 chrUextra 22037089 22037278 -6967378 + R1_DM LINE R1 1 192 -5164 1 753 316 123 0 0 chrUextra 22037276 22037333 -6967323 + R1_DM LINE R1 593 649 -4707 1 753 5335 2 0 0 chrUextra 22037433 22038005 -6966651 + LSU-rRNA_Dme rRNA rRNA 2084 2655 -1245 1 753 886 0 0 10 chrUextra 22037998 22038097 -6966559 + R1_DM LINE R1 4800 4897 -459 1 753 3840 42 2 0 chrUextra 22038197 22038673 -6965983 - MAX_I LTR Pao -57 7857 7381 1 753 1043 40 0 7 chrUextra 22038710 22038861 -6965795 - MAX_I LTR Pao -538 7376 7227 1 753 4524 2 0 2 chrUextra 22038961 22039451 -6965205 - LSU-rRNA_Dme rRNA rRNA -1624 2276 1788 1 753 1083 15 8 8 chrUextra 22039492 22039624 -6965032 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1660 1 753 3777 5 0 2 chrUextra 22039725 22040142 -6964514 - R1_DM LINE R1 -3002 2354 1939 1 753 2381 4 0 0 chrUextra 22040134 22040389 -6964267 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2400 1 753 6077 1 1 3 chrUextra 22040489 22041153 -6963503 + SSU-rRNA_Dme rRNA rRNA 868 1530 -465 1 753 6017 1 0 1 chrUextra 22041253 22041917 -6962739 + R1_DM LINE R1 1323 1985 -3371 1 753 1620 0 0 0 chrUextra 22042888 22043068 -6961588 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 753 299 177 31 10 chrUextra 22043068 22043165 -6961491 + CT-rich Low_complexity Low_complexity 2 100 0 1 753 545 144 49 12 chrUextra 22043201 22043363 -6961293 + CT-rich Low_complexity Low_complexity 5 172 0 1 753 192 0 125 0 chrUextra 22043397 22043445 -6961211 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 753 2051 5 0 0 chrUextra 22043988 22044209 -6960447 - SSU-rRNA_Dme rRNA rRNA 0 1995 1775 1 753 4938 69 65 0 chrUextra 22044309 22044973 -6959683 - R1_DM LINE R1 -4624 732 26 1 753 3287 6 0 0 chrUextra 22045073 22045431 -6959225 + DMRT1B LINE R1 4826 5183 0 1 753 189 0 0 0 chrUextra 22045431 22045452 -6959204 + (A)n Simple_repeat Simple_repeat 1 21 0 1 753 2488 25 0 0 chrUextra 22045453 22045736 -6958920 - R1_DM LINE R1 -2785 2571 2289 1 753 1821 5 9 5 chrUextra 22045837 22046051 -6958605 + LSU-rRNA_Dme rRNA rRNA 1577 1791 -2109 1 753 3800 0 0 2 chrUextra 22046092 22046501 -6958155 + LSU-rRNA_Dme rRNA rRNA 1788 2195 -1705 1 753 682 120 0 0 chrUextra 22046601 22046709 -6957947 - ARS406_DM Unknown Unknown -245 108 1 1 753 3157 184 8 6 chrUextra 22046613 22047265 -6957391 + SAR_DM Satellite Satellite 192 844 -628 1 753 5780 29 0 0 chrUextra 22047365 22048029 -6956627 - R1_DM LINE R1 -3241 2115 1452 1 753 2949 197 14 22 chrUextra 22048129 22048791 -6955865 + SAR_DM Satellite Satellite 1 656 -203 1 753 1839 17 16 25 chrUextra 22048927 22049169 -6955487 + NTS_DM Other Other 1 240 0 1 753 1899 17 17 17 chrUextra 22049169 22049409 -6955247 + NTS_DM Other Other 1 240 0 1 753 1294 14 0 0 chrUextra 22049409 22049556 -6955100 + NTS_DM Other Other 1 147 -93 1 753 263 0 0 0 chrUextra 22049661 22049690 -6954966 + LSU-rRNA_Dme rRNA rRNA 3872 3900 0 1 753 268 196 0 19 chrUextra 22049791 22049843 -6954813 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 268 196 0 19 chrUextra 22049883 22049935 -6954721 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 268 196 0 19 chrUextra 22049975 22050027 -6954629 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 278 176 0 19 chrUextra 22050058 22050110 -6954546 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 22 56 0 0 chrUextra 22050123 22050159 -6954497 + AT_rich Low_complexity Low_complexity 1 36 0 1 753 936 9 0 27 chrUextra 22050185 22050297 -6954359 + NTS_DM Other Other 25 133 -107 1 753 293 174 70 102 chrUextra 22050595 22050723 -6953933 - BS LINE Jockey -4967 159 36 1 753 492 113 0 0 chrUextra 22050726 22050797 -6953859 + DMCR1A LINE CR1 2526 2596 -1874 1 753 1220 126 87 5 chrUextra 22050801 22051008 -6953648 + DMCR1A LINE CR1 2771 2994 -1476 1 753 493 157 12 0 chrUextra 22051002 22051085 -6953571 + DMCR1A LINE CR1 3247 3330 -1140 1 753 717 13 0 0 chrUextra 22051185 22051263 -6953393 - NTS_DM Other Other -162 78 1 1 753 1878 21 17 17 chrUextra 22051263 22051503 -6953153 - NTS_DM Other Other 0 240 1 1 753 1848 21 17 21 chrUextra 22051503 22051744 -6952912 - NTS_DM Other Other 0 240 1 1 753 686 20 38 38 chrUextra 22051744 22051849 -6952807 - NTS_DM Other Other 0 240 136 1 753 882 47 0 0 chrUextra 22051952 22052059 -6952597 + NTS_DM Other Other 27 133 -107 1 753 1350 18 0 6 chrUextra 22052059 22052224 -6952432 + NTS_DM Other Other 38 201 -39 1 753 936 9 0 27 chrUextra 22052276 22052388 -6952268 + NTS_DM Other Other 25 133 -107 1 753 1350 18 0 6 chrUextra 22052388 22052553 -6952103 + NTS_DM Other Other 38 201 -39 1 753 6188 0 0 1 chrUextra 22052713 22053377 -6951279 - LSU-rRNA_Dme rRNA rRNA -547 3353 2691 1 753 3241 179 9 8 chrUextra 22053477 22054141 -6950515 + SAR_DM Satellite Satellite 256 920 -552 1 753 749 117 55 0 chrUextra 22054243 22054371 -6950285 - ARS406_DM Unknown Unknown -218 135 1 1 753 2933 181 24 6 chrUextra 22054272 22054905 -6949751 + SAR_DM Satellite Satellite 180 823 -649 1 753 5708 26 5 0 chrUextra 22055005 22055669 -6948987 + R1_DM LINE R1 2368 3034 -2322 1 753 3534 24 35 0 chrUextra 22055769 22056195 -6948461 + R1_DM LINE R1 4626 5066 -290 1 753 984 44 0 0 chrUextra 22056192 22056306 -6948350 + R1_DM LINE R1 5243 5356 0 1 753 632 85 11 0 chrUextra 22056339 22056433 -6948223 + R1_DM LINE R1 1 95 -5261 1 753 2542 207 13 19 chrUextra 22056533 22057196 -6947460 - SAR_DM Satellite Satellite -670 658 1 1 753 1620 0 0 0 chrUextra 22057297 22057573 -6947083 + (CACAA)n Simple_repeat Simple_repeat 1 276 0 1 753 5599 0 1 5 chrUextra 22058061 22058725 -6945931 + R1_DM LINE R1 1081 1742 -3614 1 753 2074 183 12 9 chrUextra 22058825 22059489 -6945167 - SAR_DM Satellite Satellite -702 665 1 1 753 5497 21 1 1 chrUextra 22059589 22060253 -6944403 + DMCR1A LINE CR1 2440 3103 -1367 1 753 2792 174 27 14 chrUextra 22060353 22061017 -6943639 - SAR_DM Satellite Satellite -454 1018 346 1 753 5534 1 0 0 chrUextra 22061117 22061781 -6942875 + ROO_I LTR Pao 777 1440 -6816 1 753 4419 0 0 0 chrUextra 22061881 22062381 -6942275 - HOBO DNA hAT -2516 500 1 1 753 2637 0 3 3 chrUextra 22062645 22062961 -6941695 - BLASTOPIA_I LTR Gypsy -4165 316 1 1 753 2140 15 7 11 chrUextra 22062961 22063237 -6941419 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 753 592 0 14 0 chrUextra 22063237 22063309 -6941347 + LSU-rRNA_Dme rRNA rRNA 911 983 -2917 1 753 5639 11 0 0 chrUextra 22063409 22064073 -6940583 + DOC2_DM LINE Jockey 4001 4664 -129 1 753 4973 49 1 1 chrUextra 22064944 22065601 -6939055 + R1_DM LINE R1 614 1270 -4086 1 753 2735 167 15 40 chrUextra 22065705 22066361 -6938295 - SAR_DM Satellite Satellite -595 877 238 1 753 5790 0 3 0 chrUextra 22066466 22067129 -6937527 + LSU-rRNA_Dme rRNA rRNA 3035 3699 -201 1 753 2861 173 9 12 chrUextra 22067230 22067890 -6936766 + SAR_DM Satellite Satellite 301 958 -514 1 753 1334 25 19 29 chrUextra 22068012 22068217 -6936439 - NTS_DM Other Other 0 240 38 1 753 787 0 0 10 chrUextra 22068217 22068314 -6936342 - NTS_DM Other Other -107 133 38 1 753 789 19 9 36 chrUextra 22068314 22068426 -6936230 - NTS_DM Other Other -107 133 25 1 753 21 57 0 0 chrUextra 22068452 22068487 -6936169 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 1174 31 6 6 chrUextra 22068487 22068651 -6936005 - NTS_DM Other Other -39 201 38 1 753 306 0 0 0 chrUextra 22068757 22068795 -6935861 + ARS406_DM Unknown Unknown 145 182 -171 1 753 2903 168 10 10 chrUextra 22068793 22069419 -6935237 - SAR_DM Satellite Satellite -478 994 369 1 753 1620 0 0 0 chrUextra 22069521 22069786 -6934870 + (CACAA)n Simple_repeat Simple_repeat 1 265 0 1 753 4604 108 0 0 chrUextra 22070285 22070949 -6933707 - HMSBEAGLE_I LTR Gypsy -2347 4182 3519 1 753 2853 182 11 9 chrUextra 22071049 22071713 -6932943 + SAR_DM Satellite Satellite 250 914 -558 1 753 562 184 23 40 chrUextra 22071813 22071988 -6932668 + Gypsy_LTR LTR Gypsy 260 431 -51 1 753 583 73 0 0 chrUextra 22072119 22072201 -6932455 + Jockey2 LINE Jockey 1 82 -3346 1 753 706 148 30 61 chrUextra 22072205 22072370 -6932286 + Gypsy5_LTR LTR Gypsy 77 236 -194 1 753 870 26 0 0 chrUextra 22072578 22072691 -6931965 - NTS_DM Other Other -90 150 38 1 753 817 0 0 0 chrUextra 22072691 22072787 -6931869 - NTS_DM Other Other -107 133 38 1 753 832 9 9 27 chrUextra 22072787 22072898 -6931758 - NTS_DM Other Other -107 133 25 1 753 21 57 0 0 chrUextra 22072924 22072959 -6931697 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 1252 18 0 6 chrUextra 22072959 22073124 -6931532 - NTS_DM Other Other -39 201 38 1 753 791 9 18 27 chrUextra 22073124 22073234 -6931422 - NTS_DM Other Other -107 133 25 1 753 1244 171 20 27 chrUextra 22073344 22073639 -6931017 + SAR_DM Satellite Satellite 496 788 -684 1 753 1259 164 20 27 chrUextra 22073651 22073952 -6930704 + SAR_DM Satellite Satellite 496 794 -678 1 753 386 54 18 0 chrUextra 22073949 22074005 -6930651 - ARS406_DM Unknown Unknown -194 159 103 1 753 480 36 12 12 chrUextra 22074105 22074189 -6930467 + IDEFIX_LTR LTR Gypsy 511 594 0 1 753 405 55 19 0 chrUextra 22074189 22074261 -6930395 + MDG1_I LTR Gypsy 6543 6596 0 1 753 258 200 69 23 chrUextra 22074252 22074339 -6930317 + TABOR_LTR LTR Gypsy 1 91 -415 1 753 613 190 0 0 chrUextra 22074640 22074761 -6929895 + DMRT1B LINE R1 2589 2709 -2474 1 753 5762 6 0 0 chrUextra 22074869 22075533 -6929123 - Gypsy6_I LTR Gypsy -3419 3593 2930 1 753 2939 179 8 5 chrUextra 22075633 22076288 -6928368 - SAR_DM Satellite Satellite -598 874 218 1 753 2542 178 33 26 chrUextra 22076402 22077061 -6927595 - SAR_DM Satellite Satellite -569 903 240 1 753 3494 96 33 107 chrUextra 22077161 22077825 -6926831 - Gypsy12_I LTR Gypsy -3854 1692 1078 1 753 1737 47 172 0 chrUextra 22078280 22078535 -6926121 + PROTOP DNA P 1 299 -4181 1 753 414 45 45 0 chrUextra 22078522 22078589 -6926067 + PROTOP DNA P 522 591 -3889 1 753 5628 0 1 0 chrUextra 22078689 22079353 -6925303 - TRANSPAC_I LTR Gypsy -3698 892 228 1 753 5727 3 0 0 chrUextra 22079453 22080117 -6924539 + DMRT1B LINE R1 1558 2221 -2962 1 753 1620 5 0 0 chrUextra 22080253 22080460 -6924196 + (TTCTC)n Simple_repeat Simple_repeat 1 207 0 1 753 546 75 0 0 chrUextra 22080474 22080554 -6924102 + (GAGAA)n Simple_repeat Simple_repeat 1 80 0 1 753 897 173 102 15 chrUextra 22081064 22081269 -6923387 + DMLTR5 LTR Gypsy 44 266 0 1 753 351 49 65 16 chrUextra 22081268 22081330 -6923326 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 753 262 106 0 21 chrUextra 22081352 22081400 -6923256 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 753 5758 1 1 1 chrUextra 22081745 22082409 -6922247 + SSU-rRNA_Dme rRNA rRNA 1223 1886 -109 1 753 5724 1 1 3 chrUextra 22082509 22083173 -6921483 - SSU-rRNA_Dme rRNA rRNA -94 1901 1239 1 753 5801 1 0 0 chrUextra 22083273 22083937 -6920719 + SSU-rRNA_Dme rRNA rRNA 428 1091 -904 1 753 648 0 0 0 chrUextra 22084037 22084109 -6920547 + (GAGAA)n Simple_repeat Simple_repeat 2 73 0 1 753 5372 29 1 0 chrUextra 22085565 22086229 -6918427 - R1_DM LINE R1 -821 4535 3871 1 753 2968 163 14 12 chrUextra 22087097 22087757 -6916899 + SAR_DM Satellite Satellite 346 1006 -466 1 753 21 0 0 0 chrUextra 22088233 22088254 -6916402 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 37 23 0 0 chrUextra 22088275 22088319 -6916337 + AT_rich Low_complexity Low_complexity 1 44 0 1 753 21 0 0 0 chrUextra 22088411 22088432 -6916224 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 31 0 0 0 chrUextra 22088453 22088484 -6916172 + AT_rich Low_complexity Low_complexity 1 31 0 1 753 5335 14 1 1 chrUextra 22088621 22089285 -6915371 - DM176_I LTR Gypsy -3934 2486 1823 1 753 1632 268 43 45 chrUextra 22089397 22090049 -6914607 + MAX_I LTR Pao 6516 7166 -748 1 753 4564 27 5 60 chrUextra 22090149 22090813 -6913843 + BATUMI_I LTR Pao 2566 3192 -4771 1 753 1419 42 5 41 chrUextra 22090913 22091131 -6913525 - BATUMI_I LTR Pao -752 7211 7002 1 753 3735 5 0 5 chrUextra 22091131 22091577 -6913079 - BATUMI_I LTR Pao 0 7963 7520 1 753 5670 3 0 0 chrUextra 22091677 22092341 -6912315 - IDEFIX_I LTR Gypsy -3984 1644 981 1 753 2948 29 47 0 chrUextra 22092442 22092822 -6911834 - PROTOP DNA P -4082 398 1 1 753 2333 113 14 28 chrUextra 22093205 22093861 -6910795 + DMSAT6 Satellite Satellite 1 646 -141 1 753 4986 22 29 23 chrUextra 22093972 22094633 -6910023 + ROO_I LTR Pao 1516 2180 -6076 1 753 964 71 0 0 chrUextra 22094733 22094873 -6909783 + ARS406_DM Unknown Unknown 50 189 -164 1 753 2830 183 11 5 chrUextra 22094750 22095397 -6909259 - SAR_DM Satellite Satellite -535 937 287 1 753 2451 85 31 23 chrUextra 22095497 22096159 -6908497 - DMSAT6 Satellite Satellite -231 667 1 1 753 4812 76 0 14 chrUextra 22096261 22096925 -6907731 - Gypsy12_I LTR Gypsy -512 5034 4380 1 753 3085 162 9 11 chrUextra 22097789 22098452 -6906204 + SAR_DM Satellite Satellite 333 994 -478 1 753 2315 0 0 0 chrUextra 22098553 22098818 -6905838 + R2_DM LINE R2 3337 3601 -6 1 753 3498 5 0 0 chrUextra 22098814 22099217 -6905439 + LSU-rRNA_Dme rRNA rRNA 2578 2980 -920 1 753 324 0 0 0 chrUextra 22099318 22099357 -6905299 - ALUII_DM Unknown Unknown -201 39 1 1 753 21 57 0 0 chrUextra 22099357 22099392 -6905264 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 22 35 0 0 chrUextra 22099589 22099618 -6905038 + AT_rich Low_complexity Low_complexity 1 29 0 1 753 37 39 0 0 chrUextra 22099700 22099751 -6904905 + AT_rich Low_complexity Low_complexity 1 51 0 1 753 5517 0 0 1 chrUextra 22100081 22100745 -6903911 + ROO_I LTR Pao 2837 3499 -4757 1 753 5501 21 0 0 chrUextra 22100847 22101509 -6903147 + ROO_I LTR Pao 2323 2984 -5272 1 753 2912 101 134 51 chrUextra 22101624 22102272 -6902384 - TART LINE telomeric -4301 10176 9475 1 753 5727 5 0 0 chrUextra 22102373 22103037 -6901619 - R1_DM LINE R1 -677 4679 4016 1 753 3909 106 143 3 chrUextra 22103137 22103801 -6900855 - Gypsy12_I LTR Gypsy -930 4616 3860 1 753 2992 167 11 9 chrUextra 22103908 22104565 -6900091 - SAR_DM Satellite Satellite -396 1076 419 1 753 5612 3 11 6 chrUextra 22105429 22106093 -6898563 - SSU-rRNA_Dme rRNA rRNA -1263 732 66 1 753 4120 24 2 12 chrUextra 22106193 22106711 -6897945 + DMRT1A LINE R1 4671 5183 0 1 753 3745 71 68 27 chrUextra 22108485 22109149 -6895507 - STALKER4_I LTR Gypsy -5038 1492 802 1 753 3018 171 6 11 chrUextra 22109249 22109903 -6894753 - SAR_DM Satellite Satellite -490 982 332 1 753 2848 183 26 8 chrUextra 22110016 22110676 -6893980 + SAR_DM Satellite Satellite 282 953 -519 1 753 969 138 39 22 chrUextra 22110873 22111102 -6893554 - NTS_DM Other Other 0 240 8 1 753 273 125 21 0 chrUextra 22111200 22111248 -6893408 - NTS_DM Other Other -191 49 1 1 753 817 130 19 6 chrUextra 22111279 22111441 -6893215 - NTS_DM Other Other -35 205 42 1 753 5391 23 15 1 chrUextra 22112305 22112969 -6891687 + Gypsy2_I LTR Gypsy 2472 3144 -2991 1 753 2324 88 23 33 chrUextra 22113069 22113733 -6890923 + DMSAT6 Satellite Satellite 1 656 -71 1 753 5715 1 0 3 chrUextra 22113833 22114497 -6890159 - LSU-rRNA_Dme rRNA rRNA -982 2918 2257 1 753 817 0 0 0 chrUextra 22114617 22114713 -6889943 - NTS_DM Other Other -107 133 38 1 753 802 9 9 36 chrUextra 22114713 22114825 -6889831 - NTS_DM Other Other -107 133 25 1 753 21 57 0 0 chrUextra 22114851 22114886 -6889770 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 1252 18 0 6 chrUextra 22114886 22115051 -6889605 - NTS_DM Other Other -39 201 38 1 753 870 9 0 27 chrUextra 22115051 22115163 -6889493 - NTS_DM Other Other -107 133 25 1 753 344 22 0 0 chrUextra 22115215 22115260 -6889396 - NTS_DM Other Other -39 201 157 1 753 1536 21 0 5 chrUextra 22115361 22115551 -6889105 + MICROPIA_LTR LTR Gypsy 288 476 0 1 753 2674 47 29 88 chrUextra 22115555 22115999 -6888657 - MAX_I LTR Pao -7496 418 1 1 753 5656 1 3 0 chrUextra 22116126 22116789 -6887867 + LSU-rRNA_Dme rRNA rRNA 593 1257 -2643 1 753 2899 177 11 6 chrUextra 22116892 22117545 -6887111 + SAR_DM Satellite Satellite 282 937 -535 1 753 22 0 0 0 chrUextra 22117762 22117784 -6886872 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 270 239 0 0 chrUextra 22118058 22118125 -6886531 + BS2 LINE Jockey 4148 4214 -507 1 753 365 304 60 60 chrUextra 22118430 22119001 -6885655 - BLASTOPIA_I LTR Gypsy -1859 3029 2180 1 753 5281 26 11 8 chrUextra 22119181 22119843 -6884813 - FW_DM LINE Jockey -1921 2771 2108 1 753 367 113 0 31 chrUextra 22119945 22120009 -6884647 + DMTOM1_LTR LTR Gypsy 349 410 0 1 753 388 100 14 28 chrUextra 22120009 22120072 -6884584 + DMTOM1_LTR LTR Gypsy 349 410 0 1 753 301 223 23 76 chrUextra 22120072 22120203 -6884453 + ROVER-I_DM LTR Gypsy 1 124 -6460 1 753 233 291 15 15 chrUextra 22120321 22120457 -6884199 + (TAAA)n Simple_repeat Simple_repeat 2 137 0 1 753 719 277 56 46 chrUextra 22120709 22121191 -6883465 + QUASIMODO_I LTR Gypsy 1199 1729 -4331 1 753 3068 171 8 8 chrUextra 22121476 22122137 -6882519 + SAR_DM Satellite Satellite 346 1006 -466 1 753 5505 6 1 0 chrUextra 22122237 22122901 -6881755 - STALKER4_I LTR Gypsy -1136 5394 4730 1 753 1729 184 19 7 chrUextra 22123001 22123416 -6881240 + SAR_DM Satellite Satellite 484 903 -569 1 753 1005 94 0 0 chrUextra 22123422 22123581 -6881075 - ARS406_DM Unknown Unknown -194 159 1 1 753 892 207 4 4 chrUextra 22123431 22123659 -6880997 + SAR_DM Satellite Satellite 496 723 -749 1 753 2822 171 19 8 chrUextra 22123765 22124409 -6880247 - SAR_DM Satellite Satellite -627 845 195 1 753 625 133 0 0 chrUextra 22124316 22124429 -6880227 + ARS406_DM Unknown Unknown 1 113 -240 1 753 5740 1 8 0 chrUextra 22124529 22125193 -6879463 + MAX_I LTR Pao 1229 1897 -6017 1 753 5489 15 0 0 chrUextra 22125293 22125957 -6878699 + STALKER4_I LTR Gypsy 4959 5622 -908 1 753 4912 29 0 0 chrUextra 22126057 22126679 -6877977 - IDEFIX_I LTR Gypsy -5006 622 1 1 753 5514 11 0 1 chrUextra 22126821 22127485 -6877171 + STALKER4_I LTR Gypsy 5147 5809 -721 1 753 5346 14 0 1 chrUextra 22127585 22128249 -6876407 - ROO_I LTR Pao -3070 5186 4524 1 753 2624 185 6 20 chrUextra 22128349 22128994 -6875662 + SAR_DM Satellite Satellite 483 1118 -354 1 753 371 214 0 10 chrUextra 22128909 22129013 -6875643 - XDMR_DM Unknown Unknown 0 360 258 1 753 21 0 0 0 chrUextra 22129139 22129160 -6875496 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 21 0 0 0 chrUextra 22129272 22129293 -6875363 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 4973 28 0 0 chrUextra 22129908 22130541 -6874115 + STALKER4_I LTR Gypsy 3114 3746 -2784 1 753 2456 16 3 13 chrUextra 22130641 22130955 -6873701 - DIVER2_I LTR Pao -94 4053 3743 1 753 1456 43 0 99 chrUextra 22130953 22131186 -6873470 - DIVER2_I LTR Pao -2572 1575 1366 1 753 1597 0 5 0 chrUextra 22131405 22131601 -6873055 - QUASIMODO_LTR LTR Gypsy -461 197 1 1 753 3638 6 0 0 chrUextra 22131601 22132069 -6872587 - QUASIMODO_I LTR Gypsy 0 6060 5593 1 753 4431 33 9 70 chrUextra 22132173 22132833 -6871823 + BATUMI_I LTR Pao 2566 3185 -4778 1 753 1481 0 6 0 chrUextra 22132933 22133107 -6871549 - DM1731_I LTR Copia -3801 175 1 1 753 2717 33 0 0 chrUextra 22133107 22133443 -6871213 - DM1731_LTR LTR Copia 0 336 1 1 753 21 0 0 0 chrUextra 22133458 22133479 -6871177 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 291 83 0 59 chrUextra 22133481 22133532 -6871124 - PROTOP_B DNA P -1094 59 12 1 753 1642 0 0 0 chrUextra 22133697 22133884 -6870772 - QUASIMODO_I LTR Gypsy -5873 187 1 1 753 4147 2 0 0 chrUextra 22133884 22134361 -6870295 - QUASIMODO_LTR LTR Gypsy 0 658 182 1 753 5399 12 11 0 chrUextra 22134461 22134958 -6869698 - SSU-rRNA_Dme rRNA rRNA -1286 709 213 1 753 243 0 0 0 chrUextra 22134958 22134985 -6869671 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 753 5399 12 11 0 chrUextra 22134985 22135125 -6869531 - SSU-rRNA_Dme rRNA rRNA -1783 212 66 1 753 1158 126 0 0 chrUextra 22135225 22135542 -6869114 + (TA)n Simple_repeat Simple_repeat 1 317 0 1 753 2289 11 0 0 chrUextra 22135543 22135809 -6868847 - DMLTR5 LTR Gypsy 0 266 1 1 753 679 0 0 0 chrUextra 22135809 22135889 -6868767 - HMSBEAGLE_I LTR Gypsy 0 6529 6450 1 753 5561 15 0 1 chrUextra 22135989 22136653 -6868003 + DMRT1A LINE R1 3974 4636 -547 1 753 4205 6 0 2 chrUextra 22136753 22137247 -6867409 - DM1731_I LTR Copia -279 3697 3205 1 753 1380 0 31 0 chrUextra 22137254 22137417 -6867239 - DM1731_I LTR Copia -1109 2867 2700 1 753 5387 30 0 0 chrUextra 22137517 22138180 -6866476 - MAX_I LTR Pao -4522 3392 2730 1 753 671 77 19 0 chrUextra 22138283 22138387 -6866269 - SAR_DM Satellite Satellite -979 493 388 1 753 287 256 25 8 chrUextra 22138387 22138398 -6866258 + XDMR Unknown Unknown 224 340 -21 1 753 2262 175 15 15 chrUextra 22138398 22138943 -6865713 - SAR_DM Satellite Satellite -672 800 256 1 753 3144 164 8 8 chrUextra 22139043 22139706 -6864950 - SAR_DM Satellite Satellite -437 1035 373 1 753 2135 82 18 42 chrUextra 22139818 22140469 -6864187 + DMSAT6 Satellite Satellite 1 635 -3 1 753 5310 24 1 6 chrUextra 22140569 22141232 -6863424 - R1_DM LINE R1 -370 4986 4327 1 753 5562 18 0 0 chrUextra 22141334 22141995 -6862661 - R2_DM LINE R2 -356 3251 2591 1 753 5150 33 51 0 chrUextra 22142095 22142758 -6861898 + R1_DM LINE R1 2260 2956 -2400 1 753 5111 10 3 0 chrUextra 22142858 22143463 -6861193 - DOC2_DM LINE Jockey -2335 2458 1852 1 753 512 0 0 0 chrUextra 22143461 22143521 -6861135 - DOC2_DM LINE Jockey -870 3923 3864 1 753 2735 184 9 8 chrUextra 22143622 22144268 -6860388 - SAR_DM Satellite Satellite -634 838 192 1 753 664 99 9 0 chrUextra 22144173 22144284 -6860372 + ARS406_DM Unknown Unknown 2 113 -240 1 753 1092 54 437 0 chrUextra 22144384 22144631 -6860025 - R1_DM LINE R1 -3706 1650 1296 1 753 3018 58 2 7 chrUextra 22144631 22145047 -6859609 - R1_DM LINE R1 -4739 617 204 1 753 3228 191 3 8 chrUextra 22145152 22145810 -6858846 - ROVER-I_DM LTR Gypsy -3145 3439 2785 1 753 5654 1 1 5 chrUextra 22145910 22146573 -6858083 - LSU-rRNA_Dme rRNA rRNA -2391 1509 849 1 753 4520 0 0 0 chrUextra 22146811 22147336 -6857320 + FW_DM LINE Jockey 1528 2052 -2640 1 753 726 120 0 0 chrUextra 22147436 22147561 -6857095 - ARS406_DM Unknown Unknown -227 126 2 1 753 2741 187 5 6 chrUextra 22147469 22148099 -6856557 + SAR_DM Satellite Satellite 195 823 -649 1 753 5479 23 0 0 chrUextra 22148199 22148862 -6855794 - R1_DM LINE R1 -2574 2782 2120 1 753 2923 176 9 8 chrUextra 22148962 22149620 -6855036 + SAR_DM Satellite Satellite 418 1076 -396 1 753 2668 87 52 75 chrUextra 22149776 22150312 -6854344 + MAX_I LTR Pao 1 524 -7390 1 753 3000 24 38 54 chrUextra 22150488 22150935 -6853721 - Transib5 DNA Transib -2381 620 181 1 753 391 39 0 0 chrUextra 22150933 22150984 -6853672 - Transib5 DNA Transib -2946 55 5 1 753 417 40 0 0 chrUextra 22151077 22151151 -6853505 + PROTOP_B DNA P 571 644 -509 1 754 2109 84 97 6 chrUextra 22151251 22151612 -6853044 + DM297_I LTR Gypsy 5774 6167 0 1 754 267 160 0 0 chrUextra 22151612 22151662 -6852994 + DM297_LTR LTR Gypsy 1 50 -364 1 754 5605 21 0 0 chrUextra 22152014 22152677 -6851979 - MAX_I LTR Pao -3531 4383 3721 1 754 2892 171 12 11 chrUextra 22152777 22153438 -6851218 + SAR_DM Satellite Satellite 297 958 -514 1 754 1620 0 0 0 chrUextra 22153540 22153767 -6850889 + (GAGAA)n Simple_repeat Simple_repeat 1 227 0 1 754 590 154 9 0 chrUextra 22154309 22154419 -6850237 - MINOS DNA Tc1 -403 1372 1262 1 754 3893 42 8 6 chrUextra 22154433 22154955 -6849701 + TC1_DM DNA Tc1 1 523 -1143 1 754 824 25 0 8 chrUextra 22155066 22155188 -6849468 + NTS_DM Other Other 81 201 -39 1 754 21 57 0 0 chrUextra 22155188 22155223 -6849433 + AT_rich Low_complexity Low_complexity 1 35 0 1 754 832 9 9 27 chrUextra 22155249 22155360 -6849296 + NTS_DM Other Other 25 133 -107 1 754 817 0 0 0 chrUextra 22155360 22155456 -6849200 + NTS_DM Other Other 38 133 -107 1 754 1394 25 20 20 chrUextra 22155456 22155659 -6848997 + NTS_DM Other Other 38 240 0 1 754 571 14 14 0 chrUextra 22155659 22155729 -6848927 + NTS_DM Other Other 1 71 -169 1 754 5511 1 3 0 chrUextra 22155830 22156492 -6848164 - ROO_I LTR Pao -3261 4995 4332 1 754 2780 184 11 6 chrUextra 22156596 22157251 -6847405 + SAR_DM Satellite Satellite 246 903 -569 1 754 1301 24 0 6 chrUextra 22157355 22157524 -6847132 - NTS_DM Other Other -72 168 1 1 754 1734 21 17 17 chrUextra 22157524 22157764 -6846892 - NTS_DM Other Other 0 240 1 1 754 1387 25 20 20 chrUextra 22157764 22157967 -6846689 - NTS_DM Other Other 0 240 38 1 754 391 0 0 0 chrUextra 22157967 22158018 -6846638 - NTS_DM Other Other -107 133 83 1 754 4419 0 0 2 chrUextra 22158118 22158629 -6846027 + R1_DM LINE R1 4847 5356 0 1 754 1298 7 0 0 chrUextra 22158631 22158781 -6845875 + LSU-rRNA_Dme rRNA rRNA 2640 2789 -1111 1 754 5749 1 0 1 chrUextra 22158881 22159544 -6845112 - LSU-rRNA_Dme rRNA rRNA -1414 2486 1825 1 754 5519 24 0 1 chrUextra 22159644 22160307 -6844349 - Gypsy3_I LTR Gypsy -4794 1383 722 1 754 3138 18 8 5 chrUextra 22160407 22160806 -6843850 + IDEFIX_LTR LTR Gypsy 195 594 0 1 754 26 0 0 0 chrUextra 22160965 22160991 -6843665 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 5646 1 0 1 chrUextra 22161170 22161833 -6842823 - R1_DM LINE R1 -2125 3231 2570 1 754 1411 96 64 0 chrUextra 22162250 22162468 -6842188 + DNAREP1_DM LINE Penelope 363 594 0 1 754 2264 122 16 19 chrUextra 22162721 22163359 -6841297 - DMSAT6 Satellite Satellite 0 636 1 1 754 5241 35 9 0 chrUextra 22163459 22164122 -6840534 - R1_DM LINE R1 -2117 3239 2571 1 754 3808 2 0 5 chrUextra 22164222 22164668 -6839988 - FW_DM LINE Jockey -4248 444 1 1 754 543 211 0 0 chrUextra 22164679 22164845 -6839811 + (AATAG)n Simple_repeat Simple_repeat 4 169 0 1 754 4486 8 0 2 chrUextra 22164985 22165507 -6839149 - SSU-rRNA_Dme rRNA rRNA -1474 521 1 1 754 365 0 22 0 chrUextra 22165603 22165648 -6839008 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 754 2498 80 40 8 chrUextra 22165748 22166410 -6838246 + DMSAT6 Satellite Satellite 1 683 -28 1 754 2979 165 29 9 chrUextra 22166511 22167173 -6837483 - SAR_DM Satellite Satellite -446 1026 352 1 754 713 284 37 24 chrUextra 22167274 22167734 -6836922 - IDEFIX_I LTR Gypsy -3709 1919 1643 1 754 5318 5 9 1 chrUextra 22168037 22168700 -6835956 + QUASIMODO_I LTR Gypsy 4177 4844 -1216 1 754 1930 0 0 0 chrUextra 22168840 22169062 -6835594 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 1 754 21 95 0 0 chrUextra 22169074 22169137 -6835519 + AT_rich Low_complexity Low_complexity 1 63 0 1 754 34 24 0 0 chrUextra 22169350 22169391 -6835265 + AT_rich Low_complexity Low_complexity 1 41 0 1 754 624 94 0 0 chrUextra 22170120 22170226 -6834430 + (CATGT)n Simple_repeat Simple_repeat 4 109 0 1 754 4557 2 0 0 chrUextra 22171855 22172377 -6832279 - LSU-rRNA_Dme rRNA rRNA -1591 2309 1788 1 754 770 0 0 11 chrUextra 22172421 22172515 -6832141 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1696 1 754 5448 23 0 1 chrUextra 22172615 22173278 -6831378 + R1_DM LINE R1 3024 3685 -1671 1 754 4352 58 1 56 chrUextra 22173378 22174041 -6830615 + BATUMI_I LTR Pao 2386 3012 -4951 1 754 1434 10 46 5 chrUextra 22174141 22174335 -6830321 + Invader3_I LTR Gypsy 4687 4888 0 1 754 2377 7 42 0 chrUextra 22174335 22174621 -6830035 + Invader3_LTR LTR Gypsy 1 298 0 1 754 1620 0 0 5 chrUextra 22174904 22175122 -6829534 + (GAGAA)n Simple_repeat Simple_repeat 1 216 0 1 754 2807 178 8 11 chrUextra 22175667 22176320 -6828336 + SAR_DM Satellite Satellite 253 903 -569 1 754 1691 23 0 0 chrUextra 22176430 22176644 -6828012 + FW_DM LINE Jockey 4477 4690 -2 1 754 3477 38 7 2 chrUextra 22176645 22177093 -6827563 - R1_DM LINE R1 -3966 1390 941 1 754 245 133 0 0 chrUextra 22177193 22177238 -6827418 - ARS406_DM Unknown Unknown -308 45 1 1 754 3076 170 6 6 chrUextra 22177198 22177856 -6826800 + SAR_DM Satellite Satellite 246 903 -569 1 754 601 311 67 49 chrUextra 22177960 22178618 -6826038 + MDG1_I LTR Gypsy 2048 2717 -3879 1 754 1620 0 0 2 chrUextra 22178739 22179175 -6825481 + (TTCTC)n Simple_repeat Simple_repeat 1 434 0 1 754 1194 87 0 0 chrUextra 22179181 22179354 -6825302 + (TTTTC)n Simple_repeat Simple_repeat 4 176 0 1 754 192 40 0 0 chrUextra 22179357 22179382 -6825274 + (TTCTC)n Simple_repeat Simple_repeat 1 25 0 1 754 32 0 0 0 chrUextra 22179769 22179801 -6824855 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 1830 5 0 0 chrUextra 22179933 22180145 -6824511 + SSU-rRNA_Dme rRNA rRNA 1 212 -1783 1 754 1212 77 0 0 chrUextra 22180247 22180416 -6824240 - MAX_I LTR Pao -7189 725 557 1 754 3676 2 0 0 chrUextra 22180484 22180908 -6823748 + NOMAD_LTR LTR Gypsy 1 424 -94 1 754 5684 1 0 1 chrUextra 22181008 22181671 -6822985 - DOC LINE Jockey -1458 3267 2606 1 754 2821 180 9 11 chrUextra 22181777 22182434 -6822222 - SAR_DM Satellite Satellite -396 1076 421 1 754 5759 0 0 0 chrUextra 22182534 22183197 -6821459 + R1_DM LINE R1 2057 2719 -2637 1 754 4218 2 0 2 chrUextra 22183297 22183785 -6820871 + LSU-rRNA_Dme rRNA rRNA 2163 2649 -1251 1 754 1463 12 0 0 chrUextra 22183787 22183960 -6820696 + R1_DM LINE R1 5039 5211 -145 1 754 21 89 0 0 chrUextra 22184405 22184461 -6820195 + AT_rich Low_complexity Low_complexity 1 56 0 1 754 2077 0 4 4 chrUextra 22184480 22184723 -6819933 - SSU-rRNA_Dme rRNA rRNA 0 1995 1753 1 754 612 130 0 0 chrUextra 22184823 22184923 -6819733 + ARS406_DM Unknown Unknown 94 193 -160 1 754 2064 110 89 82 chrUextra 22184927 22185077 -6819579 + FB4_DM DNA Tc1 173 321 -3768 1 754 199 0 31 31 chrUextra 22185077 22185109 -6819547 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 754 2064 110 89 82 chrUextra 22185109 22185484 -6819172 + FB4_DM DNA Tc1 322 702 -3387 1 754 2914 192 10 13 chrUextra 22185588 22186210 -6818446 + Gypsy5_I LTR Gypsy 3278 3897 -2612 1 754 3345 196 0 0 chrUextra 22187112 22187770 -6816886 + ROVER-I_DM LTR Gypsy 3444 4101 -2483 1 754 5671 0 1 0 chrUextra 22187875 22188538 -6816118 + DOC LINE Jockey 854 1517 -3208 1 754 4637 24 0 0 chrUextra 22188638 22189223 -6815433 - ROO_I LTR Pao -1227 7029 6445 1 754 338 24 0 0 chrUextra 22189218 22189259 -6815397 - ROO_I LTR Pao -1994 6262 6222 1 754 387 0 0 0 chrUextra 22189256 22189301 -6815355 - ROO_I LTR Pao -2252 6004 5960 1 754 5708 1 1 3 chrUextra 22189401 22190064 -6814592 - SSU-rRNA_Dme rRNA rRNA -253 1742 1081 1 754 4068 21 63 1 chrUextra 22190164 22190827 -6813829 - R1_DM LINE R1 -1407 3949 3246 1 754 4260 2 0 0 chrUextra 22190927 22191414 -6813242 + R2_DM LINE R2 3117 3603 -4 1 754 930 18 0 0 chrUextra 22191410 22191519 -6813137 + LSU-rRNA_Dme rRNA rRNA 2578 2686 -1214 1 754 599 0 0 0 chrUextra 22191516 22191590 -6813066 + R1_DM LINE R1 852 925 -4431 1 754 2299 78 27 9 chrUextra 22191690 22192024 -6812632 + QUASIMODO_LTR LTR Gypsy 319 658 0 1 754 2606 172 20 31 chrUextra 22192463 22193116 -6811540 + SAR_DM Satellite Satellite 191 836 -636 1 754 5229 42 0 5 chrUextra 22193216 22193879 -6810777 + BATUMI_I LTR Pao 4486 5145 -2818 1 754 878 109 9 19 chrUextra 22193979 22194641 -6810015 + RSP Satellite Satellite 1 655 0 1 754 5370 1 1 5 chrUextra 22194742 22195405 -6809251 + ROO_I LTR Pao 2857 3517 -4739 1 754 1158 122 0 0 chrUextra 22197031 22197523 -6807133 + (TA)n Simple_repeat Simple_repeat 1 492 0 1 754 1348 35 6 0 chrUextra 22197523 22197694 -6806962 - DMLTR5 LTR Gypsy 0 266 95 1 754 862 28 0 0 chrUextra 22198572 22198680 -6805976 + NTS_DM Other Other 26 133 -107 1 754 1252 18 0 6 chrUextra 22198680 22198845 -6805811 + NTS_DM Other Other 38 201 -39 1 754 870 9 0 27 chrUextra 22198897 22199009 -6805647 + NTS_DM Other Other 25 133 -107 1 754 1232 24 0 6 chrUextra 22199009 22199174 -6805482 + NTS_DM Other Other 38 201 -39 1 754 2688 179 12 25 chrUextra 22199331 22199983 -6804673 - SAR_DM Satellite Satellite -371 1101 458 1 754 2702 55 47 7 chrUextra 22200083 22200490 -6804166 - DOC5_DM LINE Jockey -2841 1841 1419 1 754 618 102 8 25 chrUextra 22200491 22200612 -6804044 - DOC5_DM LINE Jockey -3976 706 588 1 754 598 50 252 0 chrUextra 22200611 22200746 -6803910 - DOC5_DM LINE Jockey -4327 355 187 1 754 1731 21 17 17 chrUextra 22200846 22201086 -6803570 - NTS_DM Other Other 0 240 1 1 754 1759 17 17 17 chrUextra 22201086 22201326 -6803330 - NTS_DM Other Other 0 240 1 1 754 1282 11 22 16 chrUextra 22201326 22201509 -6803147 - NTS_DM Other Other 0 240 57 1 754 1874 5 0 0 chrUextra 22201609 22201832 -6802824 - FW_DM LINE Jockey -1870 2822 2600 1 754 3667 14 2 0 chrUextra 22201831 22202270 -6802386 - FW_DM LINE Jockey -2499 2193 1754 1 754 1837 13 0 32 chrUextra 22202372 22202618 -6802038 + G_DM LINE Jockey 4109 4346 0 1 754 235 186 0 0 chrUextra 22202699 22202742 -6801914 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 1 754 246 150 0 0 chrUextra 22202791 22202831 -6801825 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 754 226 103 25 25 chrUextra 22202883 22202923 -6801733 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 754 306 26 0 0 chrUextra 22202996 22203035 -6801621 + G_DM LINE Jockey 1 39 -4307 1 754 704 0 35 0 chrUextra 22203712 22203798 -6800858 + (TTCTC)n Simple_repeat Simple_repeat 2 90 0 1 754 5819 1 0 0 chrUextra 22203898 22204561 -6800095 - SSU-rRNA_Dme rRNA rRNA -1082 913 251 1 754 5046 17 119 0 chrUextra 22204661 22205324 -6799332 - STALKER4_I LTR Gypsy -2431 4099 3358 1 754 245 54 0 0 chrUextra 22205427 22205464 -6799192 + ARS406_DM Unknown Unknown 35 71 -282 1 754 2602 171 19 15 chrUextra 22205471 22206087 -6798569 - SAR_DM Satellite Satellite -416 1056 438 1 754 5550 9 0 0 chrUextra 22206187 22206850 -6797806 - STALKER4_I LTR Gypsy -585 5945 5283 1 754 565 15 0 0 chrUextra 22206950 22207017 -6797639 - ROO_I LTR Pao -8189 67 1 1 754 3738 5 0 0 chrUextra 22207017 22207445 -6797211 - ROO_LTR LTR Pao 0 428 1 1 754 5478 12 0 0 chrUextra 22207713 22208376 -6796280 - STALKER4_I LTR Gypsy -770 5760 5098 1 754 4181 15 5 103 chrUextra 22208476 22209139 -6795517 + DM176_I LTR Gypsy 273 870 -5550 1 754 3693 126 18 8 chrUextra 22209239 22209902 -6794754 + TART LINE telomeric 8973 9642 -4835 1 754 3871 36 0 6 chrUextra 22210002 22210503 -6794153 + BATUMI_I LTR Pao 7466 7963 0 1 754 977 62 24 22 chrUextra 22210503 22210665 -6793991 + BATUMI_LTR LTR Pao 35 169 -103 1 754 5693 1 0 0 chrUextra 22210765 22211428 -6793228 + QUASIMODO_I LTR Gypsy 2079 2741 -3319 1 754 945 34 0 0 chrUextra 22211528 22211646 -6793010 - MICROPIA_LTR LTR Gypsy -266 210 93 1 754 1652 0 783 0 chrUextra 22211649 22211709 -6792947 + ACCORD2_I LTR Gypsy 1081 1187 -6025 1 754 222 105 0 0 chrUextra 22211709 22211747 -6792909 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1 754 1652 110 244 27 chrUextra 22211747 22212191 -6792465 + ACCORD2_I LTR Gypsy 1188 1730 -5482 1 754 5746 0 0 0 chrUextra 22212291 22212954 -6791702 - ROO_I LTR Pao -6428 1828 1166 1 754 5646 1 1 5 chrUextra 22213054 22213717 -6790939 - SSU-rRNA_Dme rRNA rRNA -524 1471 811 1 754 4517 5 170 5 chrUextra 22213817 22214480 -6790176 + MDG1_I LTR Gypsy 5812 6584 -12 1 754 4546 32 5 57 chrUextra 22214580 22215243 -6789413 - BATUMI_I LTR Pao -4996 2967 2340 1 754 2288 189 55 14 chrUextra 22215343 22215997 -6788659 + TART LINE telomeric 8952 9551 -4926 1 754 1718 25 17 17 chrUextra 22216141 22216381 -6788275 + NTS_DM Other Other 1 240 0 1 754 1759 17 17 17 chrUextra 22216381 22216621 -6788035 + NTS_DM Other Other 1 240 0 1 754 1204 14 0 0 chrUextra 22216621 22216768 -6787888 + NTS_DM Other Other 1 147 -93 1 754 5457 20 0 6 chrUextra 22216869 22217531 -6787125 + FW_DM LINE Jockey 3649 4306 -386 1 754 2750 183 8 9 chrUextra 22217632 22218272 -6786384 + SAR_DM Satellite Satellite 438 1076 -396 1 754 4057 0 0 48 chrUextra 22218395 22218911 -6785745 - LSU-rRNA_Dme rRNA rRNA -3409 491 1 1 754 21 95 0 0 chrUextra 22218923 22218986 -6785670 + AT_rich Low_complexity Low_complexity 1 63 0 1 754 5418 11 1 1 chrUextra 22219171 22219821 -6784835 + R1_DM LINE R1 3708 4357 -999 1 754 4782 2 0 0 chrUextra 22220036 22220584 -6784072 + DOC LINE Jockey 4 551 -4174 1 754 4272 15 69 0 chrUextra 22220684 22221347 -6783309 + DMRT1B LINE R1 2079 2787 -2396 1 754 935 142 17 11 chrUextra 22221447 22221625 -6783031 + HETA LINE telomeric 5301 5479 -602 1 754 2641 134 8 14 chrUextra 22221623 22222109 -6782547 + HETA LINE telomeric 3455 3937 -2144 1 754 513 288 16 16 chrUextra 22222362 22222609 -6782047 - TV1I LTR Gypsy -5005 958 712 1 754 5371 6 15 0 chrUextra 22222973 22223636 -6781020 + QUASIMODO_I LTR Gypsy 3818 4490 -1570 1 754 5685 5 0 1 chrUextra 22223736 22224399 -6780257 + R1_DM LINE R1 4275 4936 -420 1 754 21 0 0 0 chrUextra 22225653 22225674 -6778982 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 2300 56 0 75 chrUextra 22226177 22226523 -6778133 + CIRCE LINE Composite 973 1292 -5064 1 754 382 338 22 22 chrUextra 22226464 22226589 -6778067 + Gypsy12_I LTR Gypsy 3088 3311 -2235 1 754 550 36 0 162 chrUextra 22226589 22226688 -6777968 + CIRCE LINE Composite 1305 1387 -4969 1 754 5581 3 0 0 chrUextra 22226788 22227451 -6777205 + G_DM LINE Jockey 2046 2708 -1638 1 754 2297 170 137 9 chrUextra 22227551 22228214 -6776442 - HETA LINE telomeric -812 5269 4522 1 754 1485 0 0 0 chrUextra 22228314 22228487 -6776169 - HMSBEAGLE_I LTR Gypsy -6356 173 1 1 754 2316 8 0 0 chrUextra 22228486 22228752 -6775904 - DMLTR5 LTR Gypsy 0 266 1 1 754 564 4 128 4 chrUextra 22228752 22228977 -6775679 + (TA)n Simple_repeat Simple_repeat 1 252 0 1 754 3389 0 0 0 chrUextra 22229077 22229463 -6775193 + LSU-rRNA_Dme rRNA rRNA 3515 3900 0 1 754 22 56 0 0 chrUextra 22229535 22229571 -6775085 + AT_rich Low_complexity Low_complexity 1 36 0 1 754 246 150 0 0 chrUextra 22229576 22229616 -6775040 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 754 246 150 0 0 chrUextra 22229668 22229708 -6774948 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 754 31 0 0 0 chrUextra 22229840 22229871 -6774785 + AT_rich Low_complexity Low_complexity 1 31 0 1 754 22 35 0 0 chrUextra 22230164 22230193 -6774463 + AT_rich Low_complexity Low_complexity 1 29 0 1 754 51 31 0 0 chrUextra 22230368 22230433 -6774223 + AT_rich Low_complexity Low_complexity 1 65 0 1 754 2933 174 8 12 chrUextra 22230603 22231250 -6773406 + SAR_DM Satellite Satellite 433 1076 -396 1 754 5401 23 0 0 chrUextra 22231366 22232029 -6772627 + ROO_I LTR Pao 5690 6352 -1904 1 754 766 22 0 0 chrUextra 22232129 22232220 -6772436 + R1_DM LINE R1 5266 5356 0 1 754 4928 12 0 0 chrUextra 22232218 22232792 -6771864 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 1 754 2705 166 57 21 chrUextra 22233655 22234318 -6770338 + TART LINE telomeric 8957 9643 -4834 1 754 5563 6 1 1 chrUextra 22234418 22235081 -6769575 - R1_DM LINE R1 -1315 4041 3379 1 754 3388 24 115 1 chrUextra 22235944 22236606 -6768050 - R1_DM LINE R1 -1407 3949 3213 1 754 5523 11 1 1 chrUextra 22236707 22237370 -6767286 - R1_DM LINE R1 -1062 4294 3632 1 754 2675 134 34 8 chrUextra 22237472 22237976 -6766680 - Stalker2_I LTR Gypsy -6644 758 242 1 754 5483 15 1 12 chrUextra 22238233 22238896 -6765760 - Gypsy12_I LTR Gypsy -515 5031 4376 1 754 2831 193 6 5 chrUextra 22238998 22239659 -6764997 + SAR_DM Satellite Satellite 272 933 -539 1 754 5248 30 0 5 chrUextra 22239759 22240422 -6764234 + STALKER4_I LTR Gypsy 4377 5036 -1494 1 754 5012 53 15 3 chrUextra 22240522 22241185 -6763471 - R1_DM LINE R1 -3753 1603 933 1 754 5658 0 5 3 chrUextra 22241286 22241948 -6762708 - SSU-rRNA_Dme rRNA rRNA -217 1778 1116 1 754 5457 21 0 0 chrUextra 22242048 22242711 -6761945 - R1_DM LINE R1 -2574 2782 2120 1 754 618 112 9 0 chrUextra 22242812 22242919 -6761737 - ARS406_DM Unknown Unknown -245 108 1 1 754 2515 179 8 8 chrUextra 22242827 22243474 -6761182 + SAR_DM Satellite Satellite 1 646 -677 1 754 2188 26 0 4 chrUextra 22243574 22243841 -6760815 + ROO_LTR LTR Pao 163 428 0 1 754 2414 57 6 33 chrUextra 22243874 22244237 -6760419 + ROO_I LTR Pao 114 466 -7790 1 754 2653 3 0 0 chrUextra 22244337 22244644 -6760012 + LSU-rRNA_Dme rRNA rRNA 2242 2548 -1352 1 754 3111 3 0 3 chrUextra 22244641 22245000 -6759656 + R2_DM LINE R2 4 361 -3246 1 754 5168 26 0 0 chrUextra 22245863 22246526 -6758130 - ACCORD2_I LTR Gypsy -368 6844 6182 1 754 5456 12 1 3 chrUextra 22246626 22247289 -6757367 - R1_DM LINE R1 -1081 4275 3614 1 754 2914 175 21 9 chrUextra 22247389 22248051 -6756605 - SAR_DM Satellite Satellite -471 1001 332 1 754 4406 14 119 1 chrUextra 22248152 22248815 -6755841 + R1_DM LINE R1 3528 4268 -1088 1 754 1176 0 0 0 chrUextra 22248930 22249065 -6755591 - 5S_DM RNA RNA 0 135 1 1 754 1167 7 0 0 chrUextra 22249296 22249431 -6755225 - 5S_DM RNA RNA 0 135 1 1 754 2239 127 16 30 chrUextra 22249683 22250341 -6754315 + DMSAT6 Satellite Satellite 1 648 0 1 754 1726 17 17 21 chrUextra 22250442 22250683 -6753973 - NTS_DM Other Other 0 240 1 1 754 1744 21 17 17 chrUextra 22250683 22250923 -6753733 - NTS_DM Other Other 0 240 1 1 754 1196 17 22 22 chrUextra 22250923 22251104 -6753552 - NTS_DM Other Other 0 240 60 1 754 2902 172 12 9 chrUextra 22251210 22251867 -6752789 + SAR_DM Satellite Satellite 326 984 -488 1 754 2897 181 9 9 chrUextra 22251967 22252630 -6752026 + SAR_DM Satellite Satellite 267 929 -543 1 754 844 92 8 0 chrUextra 22252730 22252860 -6751796 - R1_DM LINE R1 -5225 131 1 1 754 4043 24 8 2 chrUextra 22252895 22253393 -6751263 - R1_DM LINE R1 -2 5354 4854 1 754 2814 183 8 11 chrUextra 22253493 22254156 -6750500 + SAR_DM Satellite Satellite 298 958 -514 1 754 5366 9 1 0 chrUextra 22254256 22254919 -6749737 + DM176_I LTR Gypsy 5287 5950 -470 1 754 2901 177 14 9 chrUextra 22255019 22255682 -6748974 - SAR_DM Satellite Satellite -399 1073 408 1 754 3093 166 11 9 chrUextra 22255783 22256445 -6748211 + SAR_DM Satellite Satellite 371 1033 -439 1 754 2493 10 0 0 chrUextra 22256545 22256842 -6747814 + DM176_LTR LTR Gypsy 211 507 0 1 754 2789 19 77 0 chrUextra 22256842 22257208 -6747448 + DM176_I LTR Gypsy 1 394 -6026 1 754 2896 187 6 6 chrUextra 22257308 22257964 -6746692 + SAR_DM Satellite Satellite 248 903 -569 1 754 258 333 0 0 chrUextra 22258077 22258242 -6746414 - ROVER-I_DM LTR Gypsy -3844 2740 2576 1 754 1363 12 6 6 chrUextra 22258220 22258388 -6746268 + TLD3 Unknown Unknown 2 169 -3 1 754 470 284 28 28 chrUextra 22258360 22258650 -6746006 - DM176_I LTR Gypsy -4292 2128 1839 1 754 5146 2 0 2 chrUextra 22258901 22259497 -6745159 + POGO DNA Pogo 1 595 -1526 1 754 2423 86 9 25 chrUextra 22259597 22260233 -6744423 + DMSAT6 Satellite Satellite 1 625 -279 1 754 2503 118 72 12 chrUextra 22260365 22260944 -6743712 + DMRT1B LINE R1 4570 5183 0 1 754 3215 115 11 11 chrUextra 22261123 22261786 -6742870 - BATUMI_I LTR Pao -3014 4900 4218 1 754 2389 173 64 14 chrUextra 22261886 22262548 -6742108 + SAR_DM Satellite Satellite 1 695 -208 1 754 5730 0 0 0 chrUextra 22262649 22263312 -6741344 - R1_DM LINE R1 -2332 3024 2362 1 754 3035 166 9 9 chrUextra 22263418 22264075 -6740581 - SAR_DM Satellite Satellite -425 1047 391 1 754 2981 179 9 6 chrUextra 22264175 22264838 -6739818 + SAR_DM Satellite Satellite 249 913 -559 1 754 2507 133 16 7 chrUextra 22264942 22265601 -6739055 + G2_DM LINE Jockey 4 317 -2785 1 754 260 0 0 0 chrUextra 22265701 22265754 -6738902 + DOC LINE Jockey 4672 4724 -1 1 754 5240 5 0 0 chrUextra 22265753 22266364 -6738292 - FW_DM LINE Jockey -3633 1059 449 1 754 822 0 0 0 chrUextra 22266464 22266558 -6738098 - SSU-rRNA_Dme rRNA rRNA -1901 94 1 1 754 32 0 0 0 chrUextra 22266690 22266722 -6737934 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 28 48 0 0 chrUextra 22267051 22267093 -6737563 + AT_rich Low_complexity Low_complexity 1 42 0 1 754 4508 106 0 1 chrUextra 22267227 22267890 -6736766 + Gypsy_I LTR Gypsy 5591 6252 -255 1 754 2723 188 12 11 chrUextra 22267996 22268653 -6736003 - SAR_DM Satellite Satellite -562 910 253 1 754 5442 27 0 0 chrUextra 22268753 22269416 -6735240 - R1_DM LINE R1 -550 4806 4144 1 754 5624 1 1 0 chrUextra 22269516 22270162 -6734494 - LSU-rRNA_Dme rRNA rRNA -614 3286 2640 1 754 4881 3 3 0 chrUextra 22270282 22270847 -6733809 + LSU-rRNA_Dme rRNA rRNA 2093 2659 -1241 1 754 850 10 0 0 chrUextra 22270844 22270942 -6733714 + R1_DM LINE R1 4803 4900 -456 1 754 2750 163 19 10 chrUextra 22271044 22271704 -6732952 - SAR_DM Satellite Satellite -435 665 1 1 754 2873 179 24 8 chrUextra 22271805 22272468 -6732188 - SAR_DM Satellite Satellite -550 922 249 1 754 1322 16 26 21 chrUextra 22272568 22272762 -6731894 + NTS_DM Other Other 46 240 0 1 754 1738 21 17 17 chrUextra 22272762 22273002 -6731654 + NTS_DM Other Other 1 240 0 1 754 1741 9 18 13 chrUextra 22273002 22273231 -6731425 + NTS_DM Other Other 1 230 -10 1 754 1530 16 6 0 chrUextra 22273331 22273513 -6731143 + R1_DM LINE R1 5174 5356 0 1 754 3119 69 56 0 chrUextra 22273546 22273994 -6730662 + R1_DM LINE R1 1 473 -4883 1 754 192 40 0 0 chrUextra 22274236 22274261 -6730395 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 754 238 204 61 12 chrUextra 22274261 22274425 -6730231 + (TATAA)n Simple_repeat Simple_repeat 4 175 0 1 754 292 0 0 0 chrUextra 22274425 22274717 -6729939 + AT_rich Low_complexity Low_complexity 1 292 0 1 754 347 98 0 0 chrUextra 22274857 22274908 -6729748 - DM297_LTR LTR Gypsy -363 51 1 1 754 3710 68 33 11 chrUextra 22274908 22275518 -6729138 - DM297_I LTR Gypsy 0 6167 5545 1 754 5608 5 0 0 chrUextra 22275618 22276280 -6728376 - ROO_I LTR Pao -1103 7153 6492 1 754 21 0 0 0 chrUextra 22276476 22276497 -6728159 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 2414 184 32 28 chrUextra 22277142 22277795 -6726861 + SAR_DM Satellite Satellite 477 1132 -340 1 754 818 36 135 0 chrUextra 22277904 22278015 -6726641 - PROTOP_B DNA P -1027 126 1 1 754 1653 5 14 24 chrUextra 22278357 22278566 -6726090 - DM1731_I LTR Copia -52 3924 3718 1 754 2543 188 8 23 chrUextra 22278670 22279313 -6725343 + SAR_DM Satellite Satellite 481 1113 -359 1 754 296 213 0 21 chrUextra 22279232 22279328 -6725328 - XDMR_DM Unknown Unknown 0 360 267 1 754 946 61 3 17 chrUextra 22279432 22280064 -6724592 + RSP Satellite Satellite 1 623 0 1 754 538 179 0 8 chrUextra 22280190 22280308 -6724348 - ARS406_DM Unknown Unknown -236 117 1 1 754 2212 203 57 9 chrUextra 22280210 22280846 -6723810 + SAR_DM Satellite Satellite 191 856 -616 1 754 2258 109 14 14 chrUextra 22280954 22281613 -6723043 + DMSAT6 Satellite Satellite 1 659 -273 1 94 4980 45 0 5 chrUextra 22281714 22282355 -6722301 - BATUMI_I LTR Pao -3011 4952 4315 1 755 2724 180 8 11 chrUextra 22282476 22283112 -6721544 - SAR_DM Satellite Satellite -647 825 192 1 755 781 90 0 8 chrUextra 22283015 22283138 -6721518 + ARS406_DM Unknown Unknown 1 122 -231 1 755 5365 2 20 0 chrUextra 22283239 22283881 -6720775 - ROO_I LTR Pao -1540 6716 6062 1 755 2850 182 6 8 chrUextra 22284010 22284662 -6719994 - SAR_DM Satellite Satellite -569 903 253 1 755 692 12 0 0 chrUextra 22284764 22284844 -6719812 - LSU-rRNA_Dme rRNA rRNA -1181 2719 2640 1 755 3768 0 0 2 chrUextra 22284842 22285279 -6719377 - R1_DM LINE R1 0 5356 4921 1 755 1252 0 0 0 chrUextra 22285279 22285424 -6719232 - ROO_LTR LTR Pao 0 428 284 1 755 3173 157 9 9 chrUextra 22286286 22286948 -6717708 - SAR_DM Satellite Satellite -435 1037 376 1 755 2356 88 20 52 chrUextra 22287051 22287709 -6716947 + DMSAT6 Satellite Satellite 1 637 -74 1 755 844 10 0 0 chrUextra 22287810 22287911 -6716745 + NTS_DM Other Other 33 133 -107 1 755 1252 18 0 6 chrUextra 22287911 22288076 -6716580 + NTS_DM Other Other 38 201 -39 1 755 21 57 0 0 chrUextra 22288076 22288111 -6716545 + AT_rich Low_complexity Low_complexity 1 35 0 1 755 832 9 9 27 chrUextra 22288137 22288248 -6716408 + NTS_DM Other Other 25 133 -107 1 755 817 0 0 0 chrUextra 22288248 22288344 -6716312 + NTS_DM Other Other 38 133 -107 1 755 879 47 0 8 chrUextra 22288344 22288472 -6716184 + NTS_DM Other Other 38 164 -76 1 755 2721 0 0 6 chrUextra 22289334 22289656 -6715000 - ROO_I LTR Pao -7936 320 1 1 755 2657 6 0 0 chrUextra 22289669 22289996 -6714660 - ROO_I LTR Pao -7324 932 606 1 755 655 186 7 14 chrUextra 22290330 22290472 -6714184 + HETRP_DM Satellite Satellite 1529 1669 -203 1 755 282 29 0 0 chrUextra 22290602 22290637 -6714019 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 755 511 193 16 16 chrUextra 22290637 22290758 -6713898 + HETRP_DM Satellite Satellite 1549 1669 -203 1 755 4852 53 32 6 chrUextra 22290858 22291520 -6713136 - HETA LINE telomeric -92 5989 5311 1 755 5299 27 0 1 chrUextra 22291620 22292282 -6712374 - NINJA_I LTR Pao -138 5873 5213 1 755 1412 184 61 42 chrUextra 22292383 22292791 -6711865 - STALKER4_I LTR Gypsy -5230 1300 885 1 755 5444 15 6 1 chrUextra 22293908 22294568 -6710088 - R1_DM LINE R1 -1073 4283 3621 1 755 2729 63 55 0 chrUextra 22294668 22295047 -6709609 + TART LINE telomeric 1460 1859 -12618 1 755 2167 51 17 0 chrUextra 22295038 22295330 -6709326 + TART LINE telomeric 2045 2341 -12136 1 755 2881 170 9 11 chrUextra 22295431 22296085 -6708571 + SAR_DM Satellite Satellite 205 857 -615 1 755 347 60 20 0 chrUextra 22296042 22296092 -6708564 - ARS406_DM Unknown Unknown -164 189 139 1 755 4307 108 3 9 chrUextra 22296192 22296854 -6707802 - Gypsy12_I LTR Gypsy -2960 2586 1929 1 755 1456 168 3 7 chrUextra 22296954 22297253 -6707403 + SAR_DM Satellite Satellite 606 903 -569 1 755 3491 225 14 37 chrUextra 22297268 22298378 -6706278 + SAR_DM Satellite Satellite 1 1083 -628 1 755 5628 12 0 0 chrUextra 22298479 22299140 -6705516 - Gypsy4_I LTR Gypsy -3263 3025 2365 1 755 4500 99 3 5 chrUextra 22299240 22299900 -6704756 + Gypsy12_I LTR Gypsy 2097 2755 -2791 1 755 409 0 0 0 chrUextra 22300005 22300052 -6704604 + SSU-rRNA_Dme rRNA rRNA 1949 1995 0 1 755 21 89 0 0 chrUextra 22300071 22300127 -6704529 + AT_rich Low_complexity Low_complexity 1 56 0 1 755 227 178 0 0 chrUextra 22300766 22300811 -6703845 - ROVER-I_DM LTR Gypsy -5627 957 913 1 755 23 0 0 0 chrUextra 22300814 22300837 -6703819 + AT_rich Low_complexity Low_complexity 1 23 0 1 755 262 191 43 43 chrUextra 22300910 22301025 -6703631 + T-rich Low_complexity Low_complexity 3 117 0 1 755 208 286 8 31 chrUextra 22301208 22301338 -6703318 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 1 755 30 0 0 0 chrUextra 22301381 22301411 -6703245 + AT_rich Low_complexity Low_complexity 1 30 0 1 755 5754 0 0 0 chrUextra 22301526 22302188 -6702468 + DOC LINE Jockey 2463 3124 -1601 1 755 2706 192 14 22 chrUextra 22302288 22302950 -6701706 - SAR_DM Satellite Satellite -664 656 1 1 755 681 126 8 16 chrUextra 22303053 22303182 -6701474 + SAR_DM Satellite Satellite 776 903 -569 1 755 796 30 0 0 chrUextra 22303092 22303192 -6701464 - ARS406_DM Unknown Unknown -164 189 90 1 755 2146 183 6 16 chrUextra 22303197 22303712 -6700944 + SAR_DM Satellite Satellite 496 1005 -467 1 755 38 0 0 0 chrUextra 22303812 22303850 -6700806 + AT_rich Low_complexity Low_complexity 1 38 0 1 755 899 74 6 18 chrUextra 22304587 22305234 -6699422 + RSP Satellite Satellite 1 639 0 1 755 266 286 107 89 chrUextra 22305553 22305833 -6698823 + Invader1_LTR LTR Gypsy 84 368 -55 1 755 2845 179 11 11 chrUextra 22306098 22306760 -6697896 - SAR_DM Satellite Satellite -555 917 256 1 755 2749 186 14 9 chrUextra 22307627 22308283 -6696373 - SAR_DM Satellite Satellite -532 940 282 1 755 5542 15 1 0 chrUextra 22308386 22309046 -6695610 - DMRT1A LINE R1 -1317 3866 3206 1 755 4856 10 8 0 chrUextra 22309146 22309759 -6694897 - ROO_I LTR Pao -7343 913 296 1 755 411 0 0 0 chrUextra 22309759 22309808 -6694848 - ROO_I LTR Pao -7862 394 346 1 755 5392 27 0 1 chrUextra 22309908 22310570 -6694086 + R1_DM LINE R1 2121 2781 -2575 1 755 4548 14 0 2 chrUextra 22310670 22311223 -6693433 + FW_DM LINE Jockey 4141 4692 0 1 755 254 29 0 0 chrUextra 22311227 22311261 -6693395 - R1_DM LINE R1 -3966 1390 1357 1 755 497 57 0 14 chrUextra 22311261 22311332 -6693324 - R1_DM LINE R1 -4150 1206 1137 1 755 2562 195 26 28 chrUextra 22311432 22312090 -6692566 - SAR_DM Satellite Satellite -659 656 1 1 755 3788 2 0 2 chrUextra 22312194 22312630 -6692026 - SSU-rRNA_Dme rRNA rRNA -1560 435 1 1 755 32 0 0 0 chrUextra 22312762 22312794 -6691862 + AT_rich Low_complexity Low_complexity 1 32 0 1 755 1176 0 0 0 chrUextra 22313158 22313293 -6691363 - 5S_DM RNA RNA 0 135 1 1 755 697 12 0 0 chrUextra 22313534 22313618 -6691038 - 5S_DM RNA RNA 0 135 52 1 755 5560 0 3 0 chrUextra 22313718 22314380 -6690276 - LSU-rRNA_Dme rRNA rRNA -3006 894 231 1 755 246 150 0 0 chrUextra 22314488 22314528 -6690128 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22314580 22314620 -6690036 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22314672 22314712 -6689944 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22314764 22314804 -6689852 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 255 125 0 0 chrUextra 22314847 22314887 -6689769 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 22 56 0 0 chrUextra 22314900 22314936 -6689720 + AT_rich Low_complexity Low_complexity 1 36 0 1 755 870 9 0 27 chrUextra 22314962 22315074 -6689582 + NTS_DM Other Other 25 133 -107 1 755 512 29 15 0 chrUextra 22315074 22315142 -6689514 + NTS_DM Other Other 38 106 -134 1 755 2323 67 6 21 chrUextra 22315567 22315904 -6688752 - Baggins1 LINE LOA -262 5191 4860 1 755 5413 3 6 3 chrUextra 22316004 22316666 -6687990 + MAX_I LTR Pao 807 1470 -6444 1 755 261 103 14 29 chrUextra 22317152 22317222 -6687434 + (TAAAAA)n Simple_repeat Simple_repeat 4 72 0 1 755 24 32 0 0 chrUextra 22317730 22317761 -6686895 + AT_rich Low_complexity Low_complexity 1 31 0 1 755 23 0 0 0 chrUextra 22317837 22317860 -6686796 + AT_rich Low_complexity Low_complexity 1 23 0 1 755 519 90 11 53 chrUextra 22317860 22317954 -6686702 - BS3_DM LINE Jockey -1 1789 1700 1 755 1620 6 4 28 chrUextra 22318414 22318949 -6685707 + (TTCTC)n Simple_repeat Simple_repeat 1 521 0 1 755 5673 3 9 0 chrUextra 22319052 22319714 -6684942 + Copia2_I LTR Copia 527 1194 -2968 1 755 2837 184 24 8 chrUextra 22319814 22320476 -6684180 + SAR_DM Satellite Satellite 261 933 -539 1 755 4384 2 0 0 chrUextra 22322100 22322599 -6682057 - SSU-rRNA_Dme rRNA rRNA -1496 499 1 1 755 30 0 0 0 chrUextra 22322732 22322762 -6681894 + AT_rich Low_complexity Low_complexity 1 30 0 1 755 5444 1 1 14 chrUextra 22324386 22325048 -6679608 + SSU-rRNA_Dme rRNA rRNA 697 1350 -645 1 755 28 48 0 0 chrUextra 22325212 22325254 -6679402 + AT_rich Low_complexity Low_complexity 1 42 0 1 755 488 119 36 0 chrUextra 22325527 22325611 -6679045 - NTS_DM Other Other -150 90 4 1 755 546 12 11 34 chrUextra 22325721 22325809 -6678847 - NTS_DM Other Other -78 162 77 1 755 21 57 0 0 chrUextra 22326400 22326435 -6678221 + AT_rich Low_complexity Low_complexity 1 35 0 1 755 4544 51 33 29 chrUextra 22326672 22327333 -6677323 + R1_DM LINE R1 597 1260 -4096 1 755 411 166 0 0 chrUextra 22327434 22327523 -6677133 + ROVER-I_DM LTR Gypsy 5230 5308 -1276 1 755 2386 166 24 9 chrUextra 22327548 22328095 -6676561 + ROVER-I_DM LTR Gypsy 5990 6544 -40 1 755 2600 173 13 19 chrUextra 22328199 22328858 -6675798 + SAR_DM Satellite Satellite 1 655 -396 1 755 436 155 0 0 chrUextra 22328999 22329070 -6675586 - TAHRE LINE telomeric -2867 7596 7526 1 755 510 273 26 26 chrUextra 22329341 22329567 -6675089 - Copia_I LTR Copia -2314 2279 2054 1 755 5718 1 0 0 chrUextra 22329720 22330382 -6674274 - R1_DM LINE R1 -3195 2161 1500 1 755 5294 23 15 1 chrUextra 22331244 22331906 -6672750 - R1_DM LINE R1 -2024 3332 2662 1 755 5489 8 5 5 chrUextra 22332006 22332668 -6671988 - LSU-rRNA_Dme rRNA rRNA -2128 1772 1111 1 755 4999 6 3 8 chrUextra 22333532 22334189 -6670467 + Stalker2_I LTR Gypsy 896 1549 -5853 1 755 5654 5 0 0 chrUextra 22334292 22334954 -6669702 - R1_DM LINE R1 -3213 2143 1482 1 755 4865 52 5 9 chrUextra 22335054 22335716 -6668940 - BATUMI_I LTR Pao -4087 3876 3218 1 755 5644 1 1 0 chrUextra 22335816 22336478 -6668178 - ROO_I LTR Pao -3470 4786 4124 1 755 5795 1 0 0 chrUextra 22336578 22337240 -6667416 - Gypsy4_I LTR Gypsy -243 6045 5384 1 755 3043 175 6 6 chrUextra 22337341 22337997 -6666659 + SAR_DM Satellite Satellite 282 937 -535 1 755 5226 0 0 39 chrUextra 22338102 22338764 -6665892 - LSU-rRNA_Dme rRNA rRNA -3246 654 19 1 755 5767 0 6 0 chrUextra 22338864 22339526 -6665130 + LSU-rRNA_Dme rRNA rRNA 2677 3342 -558 1 755 5378 35 0 0 chrUextra 22339626 22340288 -6664368 - R1_DM LINE R1 -3452 1904 1243 1 755 1062 0 0 0 chrUextra 22340868 22340986 -6663670 + (TTCTC)n Simple_repeat Simple_repeat 3 120 0 1 755 2550 184 54 20 chrUextra 22341156 22341812 -6662844 + SAR_DM Satellite Satellite 1 677 -208 1 755 4978 16 8 27 chrUextra 22341912 22342574 -6662082 + MDG1_I LTR Gypsy 492 1140 -5456 1 755 2997 166 8 12 chrUextra 22342678 22343331 -6661325 - SAR_DM Satellite Satellite -577 895 246 1 755 245 133 0 0 chrUextra 22343291 22343336 -6661320 + ARS406_DM Unknown Unknown 1 45 -308 1 755 3155 0 0 0 chrUextra 22343436 22343794 -6660862 - LSU-rRNA_Dme rRNA rRNA -1755 2145 1788 1 755 2113 4 8 4 chrUextra 22343838 22344098 -6660558 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1528 1 755 3128 155 20 8 chrUextra 22344198 22344860 -6659796 - SAR_DM Satellite Satellite -420 1052 383 1 755 2053 220 12 9 chrUextra 22344962 22345622 -6659034 + G6_DM LINE Jockey 791 1426 -616 1 755 2940 176 11 8 chrUextra 22345722 22346384 -6658272 - SAR_DM Satellite Satellite -467 1005 342 1 755 677 94 0 9 chrUextra 22346506 22346613 -6658043 + TART LINE telomeric 5649 5754 -8723 1 755 2396 132 35 0 chrUextra 22346636 22347145 -6657511 + TART_B1 LINE telomeric 1746 2272 -8382 1 755 576 192 0 16 chrUextra 22347246 22347368 -6657288 + DMLTR5 LTR Gypsy 143 262 -4 1 755 2163 119 80 83 chrUextra 22347369 22347908 -6656748 + HMSBEAGLE_I LTR Gypsy 2 538 -5991 1 755 2662 185 6 14 chrUextra 22348008 22348650 -6656006 - SAR_DM Satellite Satellite -641 831 195 1 755 743 88 0 0 chrUextra 22348557 22348670 -6655986 + ARS406_DM Unknown Unknown 1 113 -240 1 755 5174 5 0 0 chrUextra 22348770 22349432 -6655224 - DM176_I LTR Gypsy -167 6253 5592 1 755 5373 23 18 0 chrUextra 22349532 22350194 -6654462 + R1_DM LINE R1 1488 2161 -3195 1 755 1239 14 7 0 chrUextra 22350294 22350442 -6654214 - Invader1_LTR LTR Gypsy -274 149 1 1 755 806 250 0 30 chrUextra 22350720 22350955 -6653701 - Invader5_I LTR Gypsy -2166 1168 941 1 755 512 163 98 65 chrUextra 22351069 22351253 -6653403 + Gypsy12_LTR LTR Gypsy 980 1169 -1167 1 755 2704 31 87 0 chrUextra 22351272 22351628 -6653028 - CIRCE LINE Composite -5969 387 1 1 755 567 90 0 11 chrUextra 22351628 22351718 -6652938 - CIRCE LINE Composite 0 6356 6268 1 755 276 140 0 50 chrUextra 22351818 22351878 -6652778 + G5A_DM LINE Jockey 2736 2792 -49 1 755 5651 1 0 1 chrUextra 22352580 22353242 -6651414 + ROO_I LTR Pao 3909 4569 -3687 1 755 5230 20 15 1 chrUextra 22353342 22354004 -6650652 - FW_DM LINE Jockey -1327 3365 2695 1 755 5650 5 0 0 chrUextra 22354104 22354766 -6649890 + DMRT1B LINE R1 2202 2863 -2320 1 755 2691 185 8 23 chrUextra 22354866 22355525 -6649131 + SAR_DM Satellite Satellite 442 1090 -382 1 755 3524 35 72 8 chrUextra 22356390 22356878 -6647778 + IDEFIX_LTR LTR Gypsy 76 594 0 1 755 2113 173 6 9 chrUextra 22357152 22357606 -6647050 + SAR_DM Satellite Satellite 1 594 -630 1 755 1022 89 0 0 chrUextra 22357606 22357764 -6646892 - ARS406_DM Unknown Unknown -195 158 1 1 755 2113 173 6 9 chrUextra 22357764 22357809 -6646847 + SAR_DM Satellite Satellite 595 655 -569 1 755 2819 174 9 11 chrUextra 22357914 22358576 -6646080 + SAR_DM Satellite Satellite 198 858 -614 1 755 2992 174 8 9 chrUextra 22358676 22359338 -6645318 + SAR_DM Satellite Satellite 408 1068 -404 1 755 21 89 0 0 chrUextra 22359980 22360036 -6644620 + AT_rich Low_complexity Low_complexity 1 56 0 1 755 393 0 0 0 chrUextra 22360055 22360100 -6644556 - SSU-rRNA_Dme rRNA rRNA 0 1995 1951 1 755 5651 3 0 0 chrUextra 22360200 22360862 -6643794 - R1_DM LINE R1 -1903 3453 2792 1 755 1934 273 11 21 chrUextra 22361724 22362352 -6642304 - Invader4_I LTR Gypsy -1641 772 151 1 755 926 307 24 36 chrUextra 22362511 22363141 -6641515 + BLOOD_I LTR Gypsy 1748 2465 -4148 1 755 2667 164 11 14 chrUextra 22363248 22363910 -6640746 + BATUMI_I LTR Pao 4212 4873 -3041 1 755 2336 164 6 6 chrUextra 22364010 22364669 -6639987 + SAR_DM Satellite Satellite 1 659 -535 1 755 613 14 0 0 chrUextra 22364772 22364843 -6639813 + STALKER4_LTR LTR Gypsy 187 257 -145 1 755 4230 14 0 0 chrUextra 22364846 22365353 -6639303 - DM176_LTR LTR Gypsy 0 507 1 1 755 711 0 0 0 chrUextra 22365353 22365434 -6639222 - DM176_I LTR Gypsy 0 6420 6340 1 755 2297 0 0 0 chrUextra 22365554 22365830 -6638826 - Copia_LTR LTR Copia 0 276 1 1 755 5521 23 0 0 chrUextra 22366296 22366958 -6637698 + MAX_I LTR Pao 1958 2619 -5295 1 755 862 28 0 0 chrUextra 22367058 22367166 -6637490 + NTS_DM Other Other 26 133 -107 1 755 1222 18 0 12 chrUextra 22367166 22367332 -6637324 + NTS_DM Other Other 38 201 -39 1 755 870 9 0 27 chrUextra 22367384 22367496 -6637160 + NTS_DM Other Other 25 133 -107 1 755 1252 18 0 6 chrUextra 22367496 22367661 -6636995 + NTS_DM Other Other 38 201 -39 1 755 1140 0 7 0 chrUextra 22367820 22367955 -6636701 - R1_DM LINE R1 -5220 136 1 1 755 4343 2 0 0 chrUextra 22367984 22368482 -6636174 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2157 1 755 1549 0 5 5 chrUextra 22368582 22368768 -6635888 - R1_DM LINE R1 -5170 186 1 1 755 4141 2 0 0 chrUextra 22368768 22369244 -6635412 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2157 1 755 5603 0 0 1 chrUextra 22369348 22370006 -6634650 + ROO_I LTR Pao 3640 4296 -3960 1 755 361 155 0 0 chrUextra 22370108 22370179 -6634477 - ARS406_DM Unknown Unknown -282 71 1 1 755 2524 186 26 11 chrUextra 22370123 22370768 -6633888 + SAR_DM Satellite Satellite 230 884 -588 1 755 29 28 0 0 chrUextra 22371101 22371137 -6633519 + AT_rich Low_complexity Low_complexity 1 36 0 1 755 5759 0 0 0 chrUextra 22371630 22372292 -6632364 + R1_DM LINE R1 2015 2676 -2680 1 755 34 24 0 0 chrUextra 22372683 22372724 -6631932 + AT_rich Low_complexity Low_complexity 1 41 0 1 755 21 95 0 0 chrUextra 22372937 22373000 -6631656 + AT_rich Low_complexity Low_complexity 1 63 0 1 755 315 0 0 24 chrUextra 22373012 22373054 -6631602 + LSU-rRNA_Dme rRNA rRNA 1 41 -3859 1 755 3054 165 11 8 chrUextra 22373154 22373812 -6630844 - SAR_DM Satellite Satellite -444 1028 369 1 755 2393 102 13 34 chrUextra 22373950 22374578 -6630078 - DMSAT6 Satellite Satellite -3 615 1 1 755 5585 3 6 0 chrUextra 22374678 22375340 -6629316 + MDG3_I LTR Gypsy 3037 3702 -1284 1 755 5629 6 1 0 chrUextra 22375440 22376102 -6628554 - R1_DM LINE R1 -254 5102 4440 1 755 2758 179 9 23 chrUextra 22376202 22376864 -6627792 + SAR_DM Satellite Satellite 438 1090 -382 1 755 5357 14 3 0 chrUextra 22376964 22377626 -6627030 - STALKER4_I LTR Gypsy -3250 3280 2617 1 755 25 48 0 46 chrUextra 22377787 22377852 -6626804 + AT_rich Low_complexity Low_complexity 1 62 0 1 755 4921 3 0 0 chrUextra 22378488 22379054 -6625602 + LSU-rRNA_Dme rRNA rRNA 2016 2581 -1319 1 755 709 10 31 0 chrUextra 22379053 22379150 -6625506 + R2_DM LINE R2 3 102 -3505 1 755 2350 199 28 26 chrUextra 22379259 22379912 -6624744 + SAR_DM Satellite Satellite 1 654 -208 1 755 2881 183 8 9 chrUextra 22380012 22380674 -6623982 + SAR_DM Satellite Satellite 256 916 -556 1 755 5550 11 0 0 chrUextra 22380774 22381436 -6623220 - Gypsy4_I LTR Gypsy -736 5552 4891 1 755 393 22 0 0 chrUextra 22381536 22381582 -6623074 + (TTCTC)n Simple_repeat Simple_repeat 1 46 0 1 755 2888 81 24 0 chrUextra 22382297 22382706 -6621950 + BS3_DM LINE Jockey 3 421 -1369 1 755 1899 63 8 0 chrUextra 22382706 22382958 -6621698 + BS3_DM LINE Jockey 526 779 -1011 1 755 5172 2 0 39 chrUextra 22383058 22383719 -6620937 - LSU-rRNA_Dme rRNA rRNA -3220 680 46 1 755 5371 2 2 0 chrUextra 22383866 22384480 -6620176 + SSU-rRNA_Dme rRNA rRNA 1 615 -1380 1 755 5557 1 5 5 chrUextra 22384582 22385241 -6619415 + LSU-rRNA_Dme rRNA rRNA 835 1493 -2407 1 755 4107 65 38 21 chrUextra 22385341 22386002 -6618654 - HETA LINE telomeric -850 5231 4560 1 755 2932 179 14 8 chrUextra 22386108 22386762 -6617894 + SAR_DM Satellite Satellite 246 903 -569 1 755 252 208 0 0 chrUextra 22387003 22387056 -6617600 + NOMAD_I LTR Gypsy 6520 6572 0 1 755 386 122 176 0 chrUextra 22387404 22387478 -6617178 - DNAREP1_DM LINE Penelope -201 393 307 1 755 31 0 0 0 chrUextra 22387491 22387522 -6617134 + AT_rich Low_complexity Low_complexity 1 31 0 1 755 2776 184 20 6 chrUextra 22387636 22388285 -6616371 - SAR_DM Satellite Satellite -396 1076 419 1 755 2847 170 11 9 chrUextra 22388399 22389045 -6615611 + SAR_DM Satellite Satellite 326 972 -500 1 755 517 0 51 38 chrUextra 22389146 22389225 -6615431 + NTS_DM Other Other 161 240 0 1 755 1260 6 0 24 chrUextra 22389225 22389391 -6615265 + NTS_DM Other Other 1 162 -78 1 755 488 119 36 0 chrUextra 22389501 22389585 -6615071 + NTS_DM Other Other 4 90 -150 1 755 2822 181 9 9 chrUextra 22389909 22390567 -6614089 - SAR_DM Satellite Satellite -610 862 205 1 755 1903 38 0 0 chrUextra 22390669 22390906 -6613750 + CIRCE LINE Composite 1646 1882 -4474 1 755 579 296 42 57 chrUextra 22390915 22391317 -6613339 + Gypsy12_I LTR Gypsy 3835 4230 -1316 1 755 2805 15 6 17 chrUextra 22390982 22391329 -6613327 + CIRCE LINE Composite 1888 2230 -4126 1 755 2875 3 3 68 chrUextra 22391429 22391813 -6612843 - LSU-rRNA_Dme rRNA rRNA -3541 359 1 1 755 21 95 0 0 chrUextra 22391825 22391888 -6612768 + AT_rich Low_complexity Low_complexity 1 63 0 1 755 1237 7 0 0 chrUextra 22392190 22392335 -6612321 + LSU-rRNA_Dme rRNA rRNA 78 222 -3678 1 755 4394 0 0 0 chrUextra 22392353 22392851 -6611805 + R2_DM LINE R2 1481 1978 -1629 1 755 5695 0 1 0 chrUextra 22392951 22393612 -6611044 + FW_DM LINE Jockey 3833 4494 -198 1 755 3009 164 11 8 chrUextra 22393726 22394373 -6610283 + SAR_DM Satellite Satellite 369 1017 -455 1 755 2847 182 11 9 chrUextra 22394473 22395134 -6609522 - SAR_DM Satellite Satellite -555 917 256 1 755 3952 9 0 0 chrUextra 22395235 22395702 -6608954 - DM176_LTR LTR Gypsy -40 467 1 1 755 1448 22 0 0 chrUextra 22395713 22395895 -6608761 - DM176_LTR LTR Gypsy 0 507 326 1 755 5240 32 5 1 chrUextra 22395997 22396656 -6608000 - R1_DM LINE R1 -2485 2871 2211 1 755 4631 19 92 0 chrUextra 22396756 22397417 -6607239 + R1_DM LINE R1 2016 2737 -2619 1 755 5379 17 5 6 chrUextra 22397517 22398178 -6606478 + R1_DM LINE R1 3168 3827 -1529 1 755 5251 27 5 3 chrUextra 22398280 22398939 -6605717 + R1_DM LINE R1 2485 3144 -2212 1 755 347 296 18 18 chrUextra 22399323 22399488 -6605168 - MDG3_I LTR Gypsy -1559 3427 3263 1 755 5357 14 0 0 chrUextra 22399802 22400461 -6604195 + QUASIMODO_I LTR Gypsy 1027 1685 -4375 1 755 2365 14 0 0 chrUextra 22400561 22400839 -6603817 + PROTOP_A DNA P 828 1105 0 1 755 1984 62 71 0 chrUextra 22400839 22401222 -6603434 + PROTOP_B DNA P 420 754 -399 1 755 2728 0 0 0 chrUextra 22401322 22401633 -6603023 + LSU-rRNA_Dme rRNA rRNA 2322 2632 -1268 1 755 3001 3 6 0 chrUextra 22401633 22401983 -6602673 + R1_DM LINE R1 1 352 -5004 1 755 1223 88 365 0 chrUextra 22402210 22402473 -6602183 + MAX_I LTR Pao 557 915 -6999 1 755 298 0 0 0 chrUextra 22402587 22402623 -6602033 + MAX_I LTR Pao 920 955 -6959 1 755 402 75 98 24 chrUextra 22402662 22402744 -6601912 + MAX_I LTR Pao 938 1025 -6889 1 755 4545 0 0 0 chrUextra 22402984 22403505 -6601151 - DMRT1B LINE R1 0 5183 4663 1 755 3413 19 0 0 chrUextra 22403605 22404020 -6600636 + R1_DM LINE R1 3868 4282 -1074 1 755 1870 22 4 0 chrUextra 22404040 22404266 -6600390 + R1_DM LINE R1 4407 4633 -723 1 755 246 150 0 0 chrUextra 22404367 22404407 -6600249 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22404459 22404499 -6600157 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 255 125 0 0 chrUextra 22404542 22404582 -6600074 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 22 56 0 0 chrUextra 22404595 22404631 -6600025 + AT_rich Low_complexity Low_complexity 1 36 0 1 755 870 9 0 27 chrUextra 22404657 22404769 -6599887 + NTS_DM Other Other 25 133 -107 1 755 1252 18 0 6 chrUextra 22404769 22404934 -6599722 + NTS_DM Other Other 38 201 -39 1 755 285 0 0 75 chrUextra 22404987 22405027 -6599629 + NTS_DM Other Other 25 61 -179 1 755 5765 0 1 1 chrUextra 22405127 22405788 -6598868 + LSU-rRNA_Dme rRNA rRNA 3031 3691 -209 1 755 5232 20 0 0 chrUextra 22405888 22406549 -6598107 + IDEFIX_I LTR Gypsy 4431 5091 -537 1 755 3544 0 5 0 chrUextra 22406649 22407057 -6597599 + SSU-rRNA_Dme rRNA rRNA 1586 1995 0 1 755 21 89 0 0 chrUextra 22407076 22407132 -6597524 + AT_rich Low_complexity Low_complexity 1 56 0 1 755 5517 0 0 1 chrUextra 22407413 22408071 -6596585 + ROO_I LTR Pao 3341 3997 -4259 1 755 859 136 13 6 chrUextra 22408178 22408334 -6596322 - HOBO DNA hAT 0 3016 2860 1 755 537 81 140 140 chrUextra 22408335 22408521 -6596135 - HOBO DNA hAT -403 2613 2428 1 755 30 45 0 0 chrUextra 22408543 22408587 -6596069 + AT_rich Low_complexity Low_complexity 1 44 0 1 755 1492 85 21 8 chrUextra 22408592 22408830 -6595826 - HOBO DNA hAT -602 2414 2174 1 755 2887 185 8 8 chrUextra 22408933 22409593 -6595063 - SAR_DM Satellite Satellite -563 909 250 1 755 360 0 0 0 chrUextra 22409792 22409832 -6594824 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1 755 714 81 8 59 chrUextra 22410454 22410572 -6594084 + Baggins1 LINE LOA 5080 5191 -262 1 755 1600 162 8 213 chrUextra 22411217 22411875 -6592781 + TAHRE LINE telomeric 7044 7516 -2947 1 755 5343 21 14 0 chrUextra 22411976 22412637 -6592019 + R1_DM LINE R1 4361 5030 -326 1 94 5713 3 0 0 chrUextra 22412740 22413398 -6591258 - LSU-rRNA_Dme rRNA rRNA -871 3029 2372 1 756 3032 171 9 8 chrUextra 22413500 22414159 -6590497 + SAR_DM Satellite Satellite 346 1005 -467 1 756 2283 220 30 7 chrUextra 22414259 22414920 -6589736 - SAR_DM Satellite Satellite -1091 675 1 1 756 1595 0 0 10 chrUextra 22415781 22415973 -6588683 - FW_DM LINE Jockey -2244 2448 2259 1 756 3953 19 23 0 chrUextra 22415961 22416442 -6588214 - Gypsy4_I LTR Gypsy -2600 3688 3197 1 756 5719 0 1 3 chrUextra 22416542 22417203 -6587453 + SSU-rRNA_Dme rRNA rRNA 1242 1901 -94 1 756 4757 18 3 58 chrUextra 22417303 22417964 -6586692 - BATUMI_I LTR Pao -4887 3076 2452 1 756 5567 1 6 3 chrUextra 22418064 22418725 -6585931 - LSU-rRNA_Dme rRNA rRNA -2133 1767 1105 1 756 374 283 19 19 chrUextra 22418825 22419034 -6585622 + Copia_I LTR Copia 2071 2279 -2314 1 756 267 152 73 29 chrUextra 22419411 22419479 -6585177 - DM176_LTR LTR Gypsy -213 294 224 1 756 5183 27 9 1 chrUextra 22419588 22420247 -6584409 + DOC2_DM LINE Jockey 916 1579 -3214 1 756 3053 3 0 0 chrUextra 22420349 22420698 -6583958 + LSU-rRNA_Dme rRNA rRNA 2284 2632 -1268 1 756 2633 7 7 0 chrUextra 22420698 22421008 -6583648 + R1_DM LINE R1 1 312 -5044 1 756 5396 21 5 0 chrUextra 22421108 22421769 -6582887 - MAX_I LTR Pao -2426 5488 4825 1 756 312 213 0 21 chrUextra 22421872 22421968 -6582688 + XDMR_DM Unknown Unknown 267 360 0 1 756 2561 186 8 22 chrUextra 22421882 22422529 -6582127 - SAR_DM Satellite Satellite -354 1118 481 1 756 2282 78 6 51 chrUextra 22422644 22423291 -6581365 + DMSAT6 Satellite Satellite 1 617 0 1 756 4430 96 26 1 chrUextra 22423391 22424051 -6580605 - R1_DM LINE R1 -3997 1359 684 1 756 1252 25 0 6 chrUextra 22424152 22424315 -6580341 - NTS_DM Other Other -78 162 1 1 756 1438 15 20 20 chrUextra 22424315 22424518 -6580138 - NTS_DM Other Other 0 240 38 1 756 870 9 0 27 chrUextra 22424518 22424630 -6580026 - NTS_DM Other Other -107 133 25 1 756 887 31 0 8 chrUextra 22424682 22424813 -6579843 - NTS_DM Other Other -39 201 72 1 756 5507 11 3 0 chrUextra 22424913 22425574 -6579082 - Gypsy4_I LTR Gypsy -424 5864 5202 1 756 1526 29 0 99 chrUextra 22425835 22426068 -6578588 + DIVER2_I LTR Pao 1366 1575 -2572 1 756 2224 19 4 0 chrUextra 22426066 22426335 -6578321 + DIVER2_I LTR Pao 3743 4012 -135 1 756 4531 0 6 0 chrUextra 22426435 22426977 -6577679 - Gypsy_I LTR Gypsy -5962 545 1 1 756 1029 8 0 0 chrUextra 22426975 22427096 -6577560 - Gypsy_LTR LTR Gypsy 0 482 362 1 756 5498 11 0 9 chrUextra 22427196 22427857 -6576799 - FW_DM LINE Jockey -1965 2727 2073 1 756 551 140 18 0 chrUextra 22428040 22428154 -6576502 + HETA LINE telomeric 5795 5910 -171 1 756 28 0 0 0 chrUextra 22428177 22428205 -6576451 + AT_rich Low_complexity Low_complexity 1 28 0 1 756 4172 0 0 0 chrUextra 22428718 22429197 -6575459 + R1_DM LINE R1 4878 5356 0 1 756 1604 5 0 0 chrUextra 22429195 22429379 -6575277 + LSU-rRNA_Dme rRNA rRNA 2640 2823 -1077 1 756 2913 169 39 9 chrUextra 22429479 22430140 -6574516 - SAR_DM Satellite Satellite -539 933 253 1 756 5386 18 6 0 chrUextra 22430240 22430901 -6573755 + DOC2_DM LINE Jockey 918 1582 -3211 1 756 2864 167 11 12 chrUextra 22431006 22431661 -6572995 + SAR_DM Satellite Satellite 321 974 -498 1 756 5686 1 0 0 chrUextra 22431762 22432423 -6572233 + R1_DM LINE R1 2739 3399 -1957 1 756 2711 174 11 11 chrUextra 22432523 22433155 -6571501 - SAR_DM Satellite Satellite -646 826 195 1 756 664 123 0 8 chrUextra 22433061 22433184 -6571472 + ARS406_DM Unknown Unknown 1 122 -231 1 756 4864 38 17 5 chrUextra 22433284 22433943 -6570713 - IDEFIX_I LTR Gypsy -1006 4622 3956 1 756 21 89 0 0 chrUextra 22434086 22434142 -6570514 + AT_rich Low_complexity Low_complexity 1 56 0 1 756 21 57 0 0 chrUextra 22434180 22434215 -6570441 + AT_rich Low_complexity Low_complexity 1 35 0 1 756 243 57 0 0 chrUextra 22434671 22434706 -6569950 - PROTOP_B DNA P 0 1153 1119 1 756 2975 175 9 8 chrUextra 22434806 22435467 -6569189 - SAR_DM Satellite Satellite -396 1076 415 1 756 997 65 0 0 chrUextra 22435567 22435706 -6568950 + ARS406_DM Unknown Unknown 44 182 -171 1 756 2172 186 10 11 chrUextra 22435704 22436226 -6568430 - SAR_DM Satellite Satellite -478 994 474 1 756 5660 1 0 1 chrUextra 22436328 22436989 -6567667 - R1_DM LINE R1 -3371 1985 1326 1 756 5334 35 1 0 chrUextra 22437089 22437750 -6566906 - R1_DM LINE R1 -353 5003 4342 1 756 1437 39 67 3 chrUextra 22437850 22438206 -6566450 - DOC2_DM LINE Jockey -4371 422 10 1 756 1509 138 14 7 chrUextra 22438219 22438510 -6566146 + SAR_DM Satellite Satellite 380 672 -800 1 756 1117 18 23 23 chrUextra 22438614 22438785 -6565871 + NTS_DM Other Other 70 240 0 1 756 1861 0 17 13 chrUextra 22438785 22439024 -6565632 + NTS_DM Other Other 1 240 0 1 756 1839 4 17 13 chrUextra 22439024 22439263 -6565393 + NTS_DM Other Other 1 240 0 1 756 2002 198 74 38 chrUextra 22439394 22440029 -6564627 + Gypsy12_LTR LTR Gypsy 901 1558 -778 1 756 4183 4 44 2 chrUextra 22440133 22440636 -6564020 + DMRT1B LINE R1 4660 5183 0 1 756 1386 0 0 0 chrUextra 22440640 22440794 -6563862 + (CACAA)n Simple_repeat Simple_repeat 4 157 0 1 756 1098 0 0 0 chrUextra 22441433 22441555 -6563101 + (TTCTC)n Simple_repeat Simple_repeat 2 123 0 1 756 516 273 67 0 chrUextra 22441945 22442110 -6562546 - Gypsy12_I LTR Gypsy -2217 3329 3154 1 756 1067 126 0 0 chrUextra 22442141 22442316 -6562340 + DMRT1B LINE R1 3134 3308 -1875 1 756 268 22 0 61 chrUextra 22442416 22442465 -6562191 + NTS_DM Other Other 117 162 -78 1 756 488 119 36 0 chrUextra 22442575 22442659 -6561997 + NTS_DM Other Other 4 90 -150 1 756 28 48 0 0 chrUextra 22442932 22442974 -6561682 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 22 56 0 0 chrUextra 22443217 22443253 -6561403 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 4493 0 2 0 chrUextra 22443325 22443838 -6560818 - LSU-rRNA_Dme rRNA rRNA 0 3900 3387 1 756 2989 168 11 8 chrUextra 22443950 22444599 -6560057 + SAR_DM Satellite Satellite 369 1019 -453 1 756 3587 83 68 2 chrUextra 22444699 22445360 -6559296 + IDEFIX_I LTR Gypsy 2209 3263 -2797 1 756 5430 20 1 6 chrUextra 22445460 22446121 -6558535 - Gypsy2_I LTR Gypsy -3477 2658 2001 1 756 32 0 0 0 chrUextra 22446278 22446310 -6558346 + AT_rich Low_complexity Low_complexity 1 32 0 1 756 28 48 0 0 chrUextra 22446638 22446680 -6557976 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 5582 11 1 0 chrUextra 22446982 22447643 -6557013 + DOC2_DM LINE Jockey 2324 2985 -1808 1 756 2898 164 17 9 chrUextra 22447752 22448404 -6556252 + SAR_DM Satellite Satellite 195 851 -621 1 756 5575 3 21 1 chrUextra 22448504 22449165 -6555491 + ROO_I LTR Pao 5174 5847 -2409 1 756 5725 1 1 0 chrUextra 22449267 22449926 -6554730 - LSU-rRNA_Dme rRNA rRNA -1406 2494 1835 1 756 5043 18 0 1 chrUextra 22450034 22450687 -6553969 - IDEFIX_I LTR Gypsy 0 5628 4977 1 756 4133 82 112 12 chrUextra 22450787 22451430 -6553226 + Gypsy12_I LTR Gypsy 4396 5102 -444 1 756 3106 162 11 8 chrUextra 22451551 22452209 -6552447 + SAR_DM Satellite Satellite 369 1028 -444 1 756 5530 3 6 3 chrUextra 22452312 22452970 -6551686 - LSU-rRNA_Dme rRNA rRNA -2132 1768 1109 1 756 401 0 0 57 chrUextra 22453070 22453123 -6551533 - NTS_DM Other Other -166 74 25 1 756 22 56 0 0 chrUextra 22453149 22453185 -6551471 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 255 125 0 0 chrUextra 22453198 22453238 -6551418 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 246 150 0 0 chrUextra 22453281 22453321 -6551335 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 246 150 0 0 chrUextra 22453373 22453413 -6551243 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 246 150 0 0 chrUextra 22453465 22453505 -6551151 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 22 56 0 0 chrUextra 22453510 22453546 -6551110 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 988 0 0 0 chrUextra 22453619 22453731 -6550925 - LSU-rRNA_Dme rRNA rRNA 0 3900 3789 1 756 547 216 127 95 chrUextra 22453831 22454200 -6550456 + Gypsy12_LTR LTR Gypsy 1311 1691 -645 1 756 1697 127 7 20 chrUextra 22454194 22454492 -6550164 + Gypsy12_I LTR Gypsy 223 516 -5030 1 756 5583 5 0 3 chrUextra 22454592 22455253 -6549403 - R1_DM LINE R1 -1786 3570 2912 1 756 5482 6 0 0 chrUextra 22455353 22456014 -6548642 + QUASIMODO_I LTR Gypsy 3672 4332 -1728 1 756 5427 5 0 0 chrUextra 22456875 22457536 -6547120 - IDEFIX_I LTR Gypsy -1086 4542 3882 1 756 5139 22 11 0 chrUextra 22457657 22458297 -6546359 + ROVER-I_DM LTR Gypsy 772 1418 -5166 1 756 439 335 10 10 chrUextra 22458508 22458804 -6545852 - GTWIN_I LTR Gypsy -2883 3538 3190 1 756 1468 33 19 0 chrUextra 22458815 22459029 -6545627 - TLD2 Unknown Unknown 0 218 1 1 756 375 332 10 10 chrUextra 22458863 22459058 -6545598 - GTWIN_I LTR Gypsy -3504 2784 2590 1 756 1320 60 0 0 chrUextra 22459490 22459804 -6544852 + (TCTTG)n Simple_repeat Simple_repeat 1 314 0 1 756 28 48 0 0 chrUextra 22460691 22460733 -6543923 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 488 119 36 0 chrUextra 22461006 22461090 -6543566 - NTS_DM Other Other -150 90 4 1 756 1072 34 0 26 chrUextra 22461189 22461341 -6543315 - NTS_DM Other Other -68 172 25 1 756 578 301 45 45 chrUextra 22461447 22461771 -6542885 - GTWIN_I LTR Gypsy -2902 3519 2969 1 756 286 269 21 43 chrUextra 22461821 22461961 -6542695 - DM297_I LTR Gypsy -3176 2991 2878 1 756 598 24 24 0 chrUextra 22461960 22462045 -6542611 - TLD2 Unknown Unknown -131 87 1 1 756 469 268 0 0 chrUextra 22461974 22462097 -6542559 - Gypsy4_I LTR Gypsy -3599 2689 2567 1 756 2674 181 8 10 chrUextra 22462202 22462828 -6541828 + SAR_DM Satellite Satellite 447 1071 -401 1 756 5426 24 0 1 chrUextra 22462963 22463624 -6541032 + R1_DM LINE R1 1666 2325 -3031 1 756 2671 199 14 20 chrUextra 22463724 22464385 -6540271 - SAR_DM Satellite Satellite -663 656 1 1 756 252 45 0 62 chrUextra 22464485 22464533 -6540123 + NTS_DM Other Other 118 162 -78 1 756 488 119 36 0 chrUextra 22464643 22464727 -6539929 + NTS_DM Other Other 4 90 -150 1 756 28 48 0 0 chrUextra 22465000 22465042 -6539614 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 2090 0 0 0 chrUextra 22465246 22465496 -6539160 + DM176_I LTR Gypsy 6171 6420 0 1 756 3021 8 10 58 chrUextra 22465496 22465907 -6538749 + DM176_LTR LTR Gypsy 1 391 -116 1 756 333 131 0 0 chrUextra 22466012 22466073 -6538583 + (CTATT)n Simple_repeat Simple_repeat 2 62 0 1 756 5783 1 0 0 chrUextra 22466768 22467429 -6537227 - R2_DM LINE R2 -2197 1410 750 1 756 639 121 0 0 chrUextra 22469051 22469150 -6535506 + (TA)n Simple_repeat Simple_repeat 1 99 0 1 756 2316 8 0 0 chrUextra 22469150 22469416 -6535240 + DMLTR5 LTR Gypsy 1 266 0 1 756 2595 0 0 0 chrUextra 22469415 22469712 -6534944 + HMSBEAGLE_I LTR Gypsy 1 297 -6232 1 756 1176 0 0 0 chrUextra 22469899 22470034 -6534622 + 5S_DM RNA RNA 1 135 0 1 756 1129 15 0 0 chrUextra 22470275 22470410 -6534246 + 5S_DM RNA RNA 1 135 0 1 756 324 152 34 0 chrUextra 22470573 22470632 -6534024 + STALKER4_LTR LTR Gypsy 319 379 -23 1 756 28 48 0 0 chrUextra 22470770 22470812 -6533844 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 1821 175 1 13 chrUextra 22470819 22471232 -6533424 + STALKER4_I LTR Gypsy 235 697 -6705 1 756 5317 17 1 5 chrUextra 22471334 22471995 -6532661 + R1_DM LINE R1 3430 4088 -1268 1 756 3287 81 11 33 chrUextra 22472095 22472617 -6532039 - Gypsy12_I LTR Gypsy -5035 511 1 1 756 279 186 34 34 chrUextra 22472631 22472720 -6531936 - Gypsy12A_LTR LTR Gypsy -553 1727 1639 1 756 495 0 0 0 chrUextra 22473462 22473517 -6531139 + (CACAA)n Simple_repeat Simple_repeat 1 55 0 1 756 5134 42 6 3 chrUextra 22473617 22474278 -6530378 + R1_DM LINE R1 1078 1740 -3616 1 756 2770 174 22 11 chrUextra 22474380 22475021 -6529635 - SAR_DM Satellite Satellite -601 871 224 1 756 352 197 0 0 chrUextra 22474959 22475035 -6529621 + ARS406_DM Unknown Unknown 1 76 -277 1 756 3081 171 8 8 chrUextra 22475140 22475800 -6528856 + SAR_DM Satellite Satellite 346 1005 -467 1 756 2856 220 1 0 chrUextra 22475909 22476559 -6528097 + ROVER-I_DM LTR Gypsy 2086 2736 -3848 1 756 2209 23 0 0 chrUextra 22476661 22476922 -6527734 - Gypsy4_I LTR Gypsy -3738 2550 2290 1 756 2808 11 63 0 chrUextra 22476922 22477070 -6527586 - Stalker3_LTR LTR Gypsy 0 372 225 1 756 207 0 0 0 chrUextra 22477070 22477093 -6527563 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 1 756 2808 11 63 0 chrUextra 22477093 22477294 -6527362 - Stalker3_LTR LTR Gypsy -148 224 2 1 756 239 0 0 0 chrUextra 22477294 22477322 -6527334 - Gypsy4_I LTR Gypsy -3995 2293 2266 1 756 2433 87 27 23 chrUextra 22478183 22478844 -6525812 + DMSAT6 Satellite Satellite 1 663 -280 1 756 5545 8 12 0 chrUextra 22479705 22480364 -6524292 - DOC2_DM LINE Jockey -2055 2738 2072 1 756 2158 8 8 0 chrUextra 22480466 22480725 -6523931 - R1_DM LINE R1 -5095 261 1 1 756 3033 2 122 0 chrUextra 22480725 22481127 -6523529 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2182 1 756 3019 171 11 8 chrUextra 22481227 22481888 -6522768 + SAR_DM Satellite Satellite 256 918 -554 1 756 3193 44 39 16 chrUextra 22482751 22483189 -6521467 + ROOA_I LTR Pao 3821 4268 -2581 1 756 1725 61 0 0 chrUextra 22483179 22483410 -6521246 + ROOA_I LTR Pao 4420 4650 -2199 1 756 5337 30 0 0 chrUextra 22483510 22484171 -6520485 + R1_DM LINE R1 3081 3741 -1615 1 756 2626 226 14 5 chrUextra 22484276 22484921 -6519735 - ROVER-I_DM LTR Gypsy -3983 2601 1951 1 756 5384 17 1 1 chrUextra 22485032 22485693 -6518963 + R1_DM LINE R1 3371 4031 -1325 1 756 5528 5 3 1 chrUextra 22485793 22486454 -6518202 - R1_DM LINE R1 -1295 4061 3400 1 756 5613 0 0 0 chrUextra 22486554 22487215 -6517441 - ROO_I LTR Pao -4594 3662 3002 1 756 5417 20 3 1 chrUextra 22487315 22487976 -6516680 - FW_DM LINE Jockey -214 4478 3817 1 756 2805 177 11 11 chrUextra 22488837 22489498 -6515158 - SAR_DM Satellite Satellite -515 957 297 1 756 5182 36 14 3 chrUextra 22489598 22490259 -6514397 - MAX_I LTR Pao -893 7021 6354 1 756 2898 170 9 11 chrUextra 22490365 22491018 -6513638 - SAR_DM Satellite Satellite -396 1076 425 1 756 3133 161 9 12 chrUextra 22491120 22491781 -6512875 + SAR_DM Satellite Satellite 389 1047 -425 1 756 3704 2 0 2 chrUextra 22491881 22492309 -6512347 - ROO_LTR LTR Pao -1 427 1 1 756 358 23 0 0 chrUextra 22492642 22492685 -6511971 - NTS_DM Other Other -197 43 1 1 756 1378 20 20 25 chrUextra 22492685 22492889 -6511767 - NTS_DM Other Other 0 240 38 1 756 817 0 0 0 chrUextra 22492889 22492985 -6511671 - NTS_DM Other Other -107 133 38 1 756 832 9 9 27 chrUextra 22492985 22493096 -6511560 - NTS_DM Other Other -107 133 25 1 756 21 57 0 0 chrUextra 22493122 22493157 -6511499 + AT_rich Low_complexity Low_complexity 1 35 0 1 756 1042 21 0 7 chrUextra 22493157 22493303 -6511353 - NTS_DM Other Other -39 201 57 1 756 567 65 0 31 chrUextra 22493403 22493499 -6511157 + (TTCTC)n Simple_repeat Simple_repeat 1 93 0 1 756 2814 184 8 6 chrUextra 22494174 22494825 -6509831 + SAR_DM Satellite Satellite 332 983 -489 1 756 3015 162 29 8 chrUextra 22494928 22495586 -6509070 + SAR_DM Satellite Satellite 252 923 -549 1 756 697 146 80 7 chrUextra 22496452 22496590 -6508066 - DNAREP1_DM LINE Penelope -425 169 22 1 756 5595 1 1 1 chrUextra 22497210 22497869 -6506787 + R1_DM LINE R1 2880 3538 -1818 1 756 4705 55 0 3 chrUextra 22497969 22498630 -6506026 + BATUMI_I LTR Pao 5867 6767 -1147 1 756 1034 68 27 64 chrUextra 22498730 22498918 -6505738 - Gypsy12_I LTR Gypsy -5365 181 1 1 756 2530 120 15 49 chrUextra 22498918 22499391 -6505265 - Gypsy12_LTR LTR Gypsy 0 2336 1880 1 756 2242 177 8 8 chrUextra 22499491 22499998 -6504658 + SAR_DM Satellite Satellite 304 810 -662 1 756 1012 68 7 0 chrUextra 22500003 22500149 -6504507 - ARS406_DM Unknown Unknown -164 189 43 1 756 2996 163 14 11 chrUextra 22501016 22501674 -6502982 + SAR_DM Satellite Satellite 369 1028 -444 1 756 5397 26 0 0 chrUextra 22502535 22503196 -6501460 + R1_DM LINE R1 2481 3141 -2215 1 756 31 26 0 0 chrUextra 22503296 22503334 -6501322 + AT_rich Low_complexity Low_complexity 1 38 0 1 756 5679 3 0 0 chrUextra 22504057 22504718 -6499938 + DMRT1B LINE R1 4138 4798 -385 1 756 5648 0 1 0 chrUextra 22504818 22505479 -6499177 + ROO_I LTR Pao 1824 2485 -5771 1 756 819 75 0 17 chrUextra 22505580 22506214 -6498442 + RSP Satellite Satellite 1 623 0 1 756 244 167 19 0 chrUextra 22506340 22506394 -6498262 + XDMR Unknown Unknown 307 361 0 1 756 2668 194 5 17 chrUextra 22506348 22506997 -6497659 - SAR_DM Satellite Satellite -361 1111 471 1 756 5643 5 1 0 chrUextra 22507100 22507760 -6496896 - R1_DM LINE R1 -269 5087 4427 1 756 1049 34 0 7 chrUextra 22507860 22508008 -6496648 + NTS_DM Other Other 55 201 -39 1 756 854 18 0 27 chrUextra 22508060 22508172 -6496484 + NTS_DM Other Other 25 133 -107 1 756 1088 43 0 24 chrUextra 22508172 22508340 -6496316 + NTS_DM Other Other 38 201 -39 1 756 21 57 0 0 chrUextra 22508340 22508375 -6496281 + AT_rich Low_complexity Low_complexity 1 35 0 1 756 778 28 9 27 chrUextra 22508401 22508512 -6496144 + NTS_DM Other Other 25 133 -107 1 756 1732 19 0 0 chrUextra 22508620 22508825 -6495831 + CIRCE LINE Composite 6152 6356 0 1 756 3712 26 9 0 chrUextra 22508825 22509280 -6495376 + CIRCE LINE Composite 1 459 -5897 1 756 2486 81 18 38 chrUextra 22509380 22510040 -6494616 + DMSAT6 Satellite Satellite 1 646 -28 1 756 34 24 0 0 chrUextra 22510370 22510411 -6494245 + AT_rich Low_complexity Low_complexity 1 41 0 1 756 880 0 0 0 chrUextra 22510699 22510800 -6493856 + LSU-rRNA_Dme rRNA rRNA 1 101 -3799 1 756 3657 71 71 23 chrUextra 22510900 22511560 -6493096 + STALKER4_I LTR Gypsy 757 1448 -5082 1 756 3240 45 2 0 chrUextra 22511660 22512108 -6492548 - IDEFIX_I LTR Gypsy -295 5333 4885 1 756 1393 74 32 0 chrUextra 22512103 22512320 -6492336 - IDEFIX_I LTR Gypsy -1646 3982 3759 1 756 1285 0 0 0 chrUextra 22512420 22512567 -6492089 + LSU-rRNA_Dme rRNA rRNA 3754 3900 0 1 756 22 56 0 0 chrUextra 22512639 22512675 -6491981 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 246 150 0 0 chrUextra 22512680 22512720 -6491936 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 246 150 0 0 chrUextra 22512772 22512812 -6491844 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 246 150 0 0 chrUextra 22512864 22512904 -6491752 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 255 125 0 0 chrUextra 22512947 22512987 -6491669 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 22 56 0 0 chrUextra 22513000 22513036 -6491620 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 726 133 8 0 chrUextra 22513182 22513310 -6491346 + ARS406_DM Unknown Unknown 61 189 -164 1 756 2862 296 52 12 chrUextra 22513213 22514599 -6490057 - SAR_DM Satellite Satellite -208 1440 1 1 756 5377 24 1 0 chrUextra 22514700 22515360 -6489296 + R1_DM LINE R1 2627 3287 -2069 1 756 2334 86 11 70 chrUextra 22515460 22516120 -6488536 + DMSAT6 Satellite Satellite 1 620 -97 1 756 1620 4 0 0 chrUextra 22516610 22516880 -6487776 + (TTTTG)n Simple_repeat Simple_repeat 1 270 0 1 756 3131 154 17 15 chrUextra 22516980 22517638 -6487018 - SAR_DM Satellite Satellite -444 1028 370 1 756 1233 120 29 267 chrUextra 22517740 22518400 -6486256 + MAX_I LTR Pao 968 1470 -6444 1 756 2823 181 5 6 chrUextra 22518500 22519132 -6485524 - SAR_DM Satellite Satellite -647 825 195 1 756 721 116 0 0 chrUextra 22519039 22519160 -6485496 + ARS406_DM Unknown Unknown 1 121 -232 1 756 2857 142 36 1 chrUextra 22519262 22519920 -6484736 + DM297_I LTR Gypsy 2931 3694 -2473 1 756 28 48 0 0 chrUextra 22520341 22520383 -6484273 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 2317 103 14 18 chrUextra 22520810 22521440 -6483216 - DMSAT6 Satellite Satellite 0 627 1 1 756 5366 20 1 1 chrUextra 22521540 22522200 -6482456 + R1_DM LINE R1 3398 4057 -1299 1 756 1025 320 25 19 chrUextra 22522300 22522871 -6481785 + GTWIN_I LTR Gypsy 4314 4887 -1534 1 756 5782 1 0 0 chrUextra 22523060 22523720 -6480936 - LINEJ1_DM LINE Jockey -2995 2025 1366 1 756 5318 34 0 8 chrUextra 22523820 22524480 -6480176 - BATUMI_I LTR Pao -1655 6308 5654 1 756 1660 5 34 0 chrUextra 22524580 22524785 -6479871 + DOC2_DM LINE Jockey 390 601 -4192 1 756 3612 5 0 0 chrUextra 22524785 22525209 -6479447 + Stalker2_LTR LTR Gypsy 1 424 0 1 756 230 32 0 0 chrUextra 22525209 22525240 -6479416 + Stalker2_I LTR Gypsy 1 31 -7371 1 756 2114 8 0 0 chrUextra 22525343 22525588 -6479068 + G5_DM LINE Jockey 3571 3815 -1041 1 756 3393 38 2 0 chrUextra 22525578 22526000 -6478656 + G5_DM LINE Jockey 3973 4395 -461 1 756 529 44 0 0 chrUextra 22526101 22526169 -6478487 + SSU-rRNA_Dme rRNA rRNA 1928 1995 0 1 756 26 64 0 0 chrUextra 22527736 22527783 -6476873 + AT_rich Low_complexity Low_complexity 1 47 0 1 756 3713 0 2 0 chrUextra 22527855 22528280 -6476376 - LSU-rRNA_Dme rRNA rRNA 0 3900 3475 1 756 1561 5 0 5 chrUextra 22528380 22528572 -6476084 - NTS_DM Other Other -49 191 1 1 756 1734 21 17 17 chrUextra 22528572 22528812 -6475844 - NTS_DM Other Other 0 240 1 1 756 1637 18 18 18 chrUextra 22528812 22529040 -6475616 - NTS_DM Other Other 0 240 13 1 756 3654 5 0 0 chrUextra 22529140 22529561 -6475095 + Gypsy4_I LTR Gypsy 5868 6288 0 1 756 1760 22 8 46 chrUextra 22529561 22529800 -6474856 + Gypsy4_LTR LTR Gypsy 1 230 -57 1 756 5538 9 1 1 chrUextra 22529900 22530560 -6474096 + R1_DM LINE R1 3250 3909 -1447 1 756 2600 196 16 21 chrUextra 22530660 22531316 -6473340 - SAR_DM Satellite Satellite -667 652 1 1 756 5571 5 0 1 chrUextra 22531420 22532080 -6472576 + STALKER4_I LTR Gypsy 1560 2218 -4312 1 756 1948 204 14 6 chrUextra 22532181 22532838 -6471818 - SAR_DM Satellite Satellite -980 662 1 1 756 2361 103 187 0 chrUextra 22533075 22533540 -6471116 + ZAM_I LTR Gypsy 2418 2969 -4521 1 756 342 102 0 0 chrUextra 22533540 22533599 -6471057 + ZAM_I LTR Gypsy 2905 2963 -4527 1 756 5560 5 0 5 chrUextra 22533700 22534360 -6470296 + R1_DM LINE R1 4342 4998 -358 1 756 2757 175 17 9 chrUextra 22534460 22535099 -6469557 - SAR_DM Satellite Satellite -503 969 326 1 756 5361 21 11 6 chrUextra 22535220 22535880 -6468776 + FW_DM LINE Jockey 2041 2703 -1989 1 756 789 30 10 10 chrUextra 22535980 22536082 -6468574 + PROTOP DNA P 4379 4480 0 1 756 26 30 0 0 chrUextra 22536432 22536465 -6468191 + AT_rich Low_complexity Low_complexity 1 33 0 1 756 2704 173 32 21 chrUextra 22536740 22537397 -6467259 + SAR_DM Satellite Satellite 298 961 -511 1 756 5461 3 0 1 chrUextra 22537500 22538160 -6466496 + ROO_I LTR Pao 777 1435 -6821 1 756 2312 187 75 11 chrUextra 22538260 22538897 -6465759 - SAR_DM Satellite Satellite -549 923 246 1 756 347 113 0 16 chrUextra 22538857 22538920 -6465736 + ARS406_DM Unknown Unknown 1 62 -291 1 756 1627 19 14 5 chrUextra 22539027 22539240 -6465416 - NTS_DM Other Other -25 215 1 1 756 1734 21 17 17 chrUextra 22539240 22539480 -6465176 - NTS_DM Other Other 0 240 1 1 756 1334 20 20 25 chrUextra 22539480 22539680 -6464976 - NTS_DM Other Other 0 240 42 1 756 5291 31 1 0 chrUextra 22539780 22540426 -6464230 + CIRCE LINE Composite 5527 6173 -183 1 756 5650 0 1 5 chrUextra 22540540 22541200 -6463456 - SSU-rRNA_Dme rRNA rRNA -641 1354 697 1 756 780 102 0 0 chrUextra 22541300 22541427 -6463229 - ARS406_DM Unknown Unknown -226 127 1 1 756 2617 179 14 10 chrUextra 22541334 22541960 -6462696 + SAR_DM Satellite Satellite 195 823 -649 1 756 450 200 0 0 chrUextra 22542073 22542168 -6462488 + BS2 LINE Jockey 2690 2784 -1937 1 756 2851 52 59 0 chrUextra 22542164 22542571 -6462085 + DOC3_DM LINE Jockey 1360 1790 -2950 1 756 5473 6 1 1 chrUextra 22542820 22543480 -6461176 - R1_DM LINE R1 -4034 1322 663 1 756 1539 0 0 0 chrUextra 22543580 22543751 -6460905 + (GAGAA)n Simple_repeat Simple_repeat 2 172 0 1 94 3102 156 15 9 chrUextra 22544340 22544999 -6459657 + SAR_DM Satellite Satellite 346 1008 -464 1 757 803 271 63 54 chrUextra 22545110 22545758 -6458898 - TABOR_I LTR Gypsy -3369 3528 2344 1 757 718 0 0 0 chrUextra 22545860 22545948 -6458708 + LSU-rRNA_Dme rRNA rRNA 2311 2398 -1502 1 757 4981 2 0 2 chrUextra 22545945 22546520 -6458136 + LSU-rRNA_Dme rRNA rRNA 2586 3159 -741 1 757 3078 166 9 8 chrUextra 22546623 22547280 -6457376 + SAR_DM Satellite Satellite 369 1026 -446 1 757 1448 17 0 0 chrUextra 22548140 22548314 -6456342 - Copia_I LTR Copia -103 4490 4317 1 757 4097 0 0 0 chrUextra 22548314 22548800 -6455856 - Copia_I LTR Copia -2805 1788 1303 1 757 4822 67 0 5 chrUextra 22548900 22549560 -6455096 + IDEFIX_I LTR Gypsy 2419 3075 -2553 1 757 5681 1 0 0 chrUextra 22549660 22550320 -6454336 - ROO_I LTR Pao -6413 1843 1184 1 757 3094 165 8 8 chrUextra 22550420 22551078 -6453578 + SAR_DM Satellite Satellite 380 1037 -435 1 757 5531 5 52 0 chrUextra 22551180 22551840 -6452816 - Copia2_I LTR Copia -573 3589 2896 1 757 34 24 0 0 chrUextra 22552347 22552388 -6452268 + AT_rich Low_complexity Low_complexity 1 41 0 1 757 2504 93 18 8 chrUextra 22552700 22553360 -6451296 - DMSAT6 Satellite Satellite -40 666 1 1 757 2346 181 14 8 chrUextra 22553479 22554120 -6450536 - SAR_DM Satellite Satellite -411 645 1 1 757 2525 211 10 12 chrUextra 22554220 22554880 -6449776 + SAR_DM Satellite Satellite 1 658 -396 1 757 5480 14 0 0 chrUextra 22554980 22555640 -6449016 + ROO_I LTR Pao 5440 6099 -2157 1 757 5830 6 0 1 chrUextra 22555740 22556400 -6448256 - DMRT1B LINE R1 -139 5044 4386 1 757 24 100 0 0 chrUextra 22557080 22557160 -6447496 + AT_rich Low_complexity Low_complexity 1 80 0 1 757 894 10 0 0 chrUextra 22557817 22557920 -6446736 + (CAATA)n Simple_repeat Simple_repeat 2 104 0 1 757 907 9 0 27 chrUextra 22558039 22558151 -6446505 - NTS_DM Other Other -107 133 25 1 757 1304 18 0 6 chrUextra 22558204 22558369 -6446287 - NTS_DM Other Other -39 201 38 1 757 907 9 0 27 chrUextra 22558369 22558481 -6446175 - NTS_DM Other Other -107 133 25 1 757 1090 20 0 7 chrUextra 22558533 22558680 -6445976 - NTS_DM Other Other -39 201 56 1 757 277 106 0 21 chrUextra 22559120 22559168 -6445488 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 757 372 49 65 16 chrUextra 22559190 22559252 -6445404 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 757 746 193 0 7 chrUextra 22559251 22559397 -6445259 - DMLTR5 LTR Gypsy 0 266 122 1 757 3019 181 6 8 chrUextra 22559540 22560181 -6444475 + SAR_DM Satellite Satellite 437 1076 -396 1 757 833 0 0 0 chrUextra 22560300 22560396 -6444260 + ROO_LTR LTR Pao 333 428 0 1 757 4923 0 0 3 chrUextra 22560396 22560960 -6443696 - ROO_I LTR Pao -2042 6214 5653 1 757 522 197 8 0 chrUextra 22561061 22561178 -6443478 - ARS406_DM Unknown Unknown -235 118 1 1 757 1082 176 43 6 chrUextra 22561073 22561709 -6442947 + SAR_DM Satellite Satellite 1 659 -680 1 757 5657 15 0 14 chrUextra 22561820 22562480 -6442176 + FW_DM LINE Jockey 1709 2359 -2333 1 757 2814 187 9 20 chrUextra 22562580 22563235 -6441421 - SAR_DM Satellite Satellite -371 1101 454 1 757 5664 26 0 0 chrUextra 22563340 22564000 -6440656 + R1_DM LINE R1 2296 2955 -2401 1 757 5774 0 1 0 chrUextra 22564100 22564760 -6439896 - ROO_I LTR Pao -3169 5087 4427 1 757 2269 15 0 0 chrUextra 22564860 22565119 -6439537 + CIRCE LINE Composite 712 970 -5386 1 757 1687 60 0 100 chrUextra 22565261 22565520 -6439136 + CIRCE LINE Composite 973 1205 -5151 1 757 238 128 26 0 chrUextra 22565624 22565663 -6438993 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 757 22 56 0 0 chrUextra 22565676 22565712 -6438944 + AT_rich Low_complexity Low_complexity 1 36 0 1 757 907 9 0 27 chrUextra 22565738 22565850 -6438806 + NTS_DM Other Other 25 133 -107 1 757 1304 18 0 6 chrUextra 22565850 22566015 -6438641 + NTS_DM Other Other 38 201 -39 1 757 907 9 0 27 chrUextra 22566067 22566179 -6438477 + NTS_DM Other Other 25 133 -107 1 757 840 20 0 0 chrUextra 22566179 22566280 -6438376 + NTS_DM Other Other 38 138 -102 1 757 2498 107 63 8 chrUextra 22566380 22567033 -6437623 - DMSAT6 Satellite Satellite -355 689 1 1 757 5885 15 0 0 chrUextra 22568660 22569320 -6435336 - DMRT1A LINE R1 -1219 3964 3305 1 757 5444 15 6 1 chrUextra 22569420 22570080 -6434576 + PROTOP DNA P 3386 4048 -432 1 757 514 119 36 0 chrUextra 22570302 22570386 -6434270 - NTS_DM Other Other -150 90 4 1 757 1355 6 0 18 chrUextra 22570496 22570661 -6433995 - NTS_DM Other Other -78 162 1 1 757 1281 6 28 17 chrUextra 22570661 22570840 -6433816 - NTS_DM Other Other 0 240 60 1 757 2661 99 174 8 chrUextra 22571113 22571600 -6433056 - DNAREP1_DM LINE Penelope -9 585 18 1 757 3024 176 8 9 chrUextra 22571704 22572356 -6432300 - SAR_DM Satellite Satellite -610 862 212 1 757 578 13 26 0 chrUextra 22572460 22572538 -6432118 + NTS_DM Other Other 54 133 -107 1 757 851 0 0 0 chrUextra 22572538 22572634 -6432022 + NTS_DM Other Other 38 133 -107 1 757 1472 20 20 20 chrUextra 22572634 22572837 -6431819 + NTS_DM Other Other 38 240 0 1 757 1794 25 17 17 chrUextra 22572837 22573077 -6431579 + NTS_DM Other Other 1 240 0 1 757 375 23 0 0 chrUextra 22573077 22573120 -6431536 + NTS_DM Other Other 1 43 -197 1 757 3036 181 9 9 chrUextra 22573220 22573877 -6430779 + SAR_DM Satellite Satellite 267 923 -549 1 757 613 116 11 0 chrUextra 22574006 22574101 -6430555 + DMCR1A LINE CR1 365 460 -4010 1 757 3594 30 4 52 chrUextra 22574120 22574640 -6430016 + DOC5_DM LINE Jockey 3979 4473 -209 1 757 600 15 0 0 chrUextra 22574740 22574807 -6429849 - NTS_DM Other Other -173 67 1 1 757 1463 20 20 25 chrUextra 22574807 22575011 -6429645 - NTS_DM Other Other 0 240 38 1 757 893 18 0 27 chrUextra 22575012 22575124 -6429532 - NTS_DM Other Other -107 133 25 1 757 1291 24 0 6 chrUextra 22575176 22575341 -6429315 - NTS_DM Other Other -39 201 38 1 757 452 17 0 0 chrUextra 22575341 22575400 -6429256 - NTS_DM Other Other -107 133 75 1 757 1746 21 21 21 chrUextra 22575510 22575750 -6428906 - NTS_DM Other Other 0 240 1 1 757 1472 20 20 20 chrUextra 22575750 22575953 -6428703 - NTS_DM Other Other 0 240 38 1 757 851 0 0 0 chrUextra 22575953 22576049 -6428607 - NTS_DM Other Other -107 133 38 1 757 850 19 9 27 chrUextra 22576049 22576160 -6428496 - NTS_DM Other Other -107 133 25 1 757 27 29 0 0 chrUextra 22576513 22576547 -6428109 + AT_rich Low_complexity Low_complexity 1 34 0 1 757 261 33 0 0 chrUextra 22576786 22576816 -6427840 + Baggins1 LINE LOA 4727 4756 -697 1 757 567 83 104 0 chrUextra 22576824 22576920 -6427736 - FB4_DM DNA Tc1 -3907 182 77 1 757 498 18 0 0 chrUextra 22577020 22577076 -6427580 - NTS_DM Other Other -184 56 1 1 757 1825 25 12 17 chrUextra 22577076 22577317 -6427339 - NTS_DM Other Other 0 240 1 1 757 1835 17 17 17 chrUextra 22577317 22577557 -6427099 - NTS_DM Other Other 0 240 1 1 757 753 34 32 32 chrUextra 22577557 22577680 -6426976 - NTS_DM Other Other 0 240 118 1 757 1642 101 283 19 chrUextra 22577780 22578282 -6426374 - R1-2_DM LINE R1 -2624 592 1 1 757 5524 30 3 0 chrUextra 22578541 22579199 -6425457 + NINJA_I LTR Pao 1594 2253 -3758 1 757 10830 99 8 8 chrUextra 22579300 22580720 -6423936 + R1_DM LINE R1 1178 2598 -2758 1 757 3096 169 32 12 chrUextra 22580821 22581480 -6423176 - SAR_DM Satellite Satellite -416 1056 385 1 757 1090 271 8 11 chrUextra 22581588 22581921 -6422735 + Gypsy6_I LTR Gypsy 6536 6840 -172 1 757 254 286 0 0 chrUextra 22581905 22581975 -6422681 + Gypsy2_I LTR Gypsy 5975 6044 -91 1 757 297 184 48 58 chrUextra 22581989 22582093 -6422563 + Gypsy2_LTR LTR Gypsy 95 197 -156 1 757 2873 176 22 9 chrUextra 22583111 22583760 -6420896 + SAR_DM Satellite Satellite 167 823 -649 1 757 5263 24 9 5 chrUextra 22583860 22584520 -6420136 - PROTOP_A DNA P -358 747 85 1 757 2913 192 26 6 chrUextra 22584620 22585280 -6419376 + SAR_DM Satellite Satellite 341 1013 -459 1 757 3005 183 8 8 chrUextra 22585380 22586035 -6418621 - SAR_DM Satellite Satellite -626 846 192 1 757 952 70 7 19 chrUextra 22586140 22586800 -6417856 + RSP Satellite Satellite 1 652 0 1 757 5388 24 6 5 chrUextra 22586900 22587560 -6417096 + PROTOP_A DNA P 28 688 -417 1 757 21 89 0 0 chrUextra 22587831 22587887 -6416769 + AT_rich Low_complexity Low_complexity 1 56 0 1 757 3716 0 2 5 chrUextra 22587906 22588320 -6416336 - SSU-rRNA_Dme rRNA rRNA 0 1995 1583 1 757 5225 11 3 1 chrUextra 22588424 22589074 -6415582 - FB4_DM DNA Tc1 -633 3456 2806 1 757 4607 0 33 0 chrUextra 22589180 22589732 -6414924 + ROO_I LTR Pao 7687 8256 0 1 757 928 9 0 0 chrUextra 22589732 22589840 -6414816 + ROO_LTR LTR Pao 1 108 -320 1 757 5741 6 0 3 chrUextra 22590700 22591360 -6413296 - Gypsy4_I LTR Gypsy -913 5375 4718 1 757 2984 172 14 20 chrUextra 22591460 22592118 -6412538 + SAR_DM Satellite Satellite 284 937 -535 1 757 989 75 9 23 chrUextra 22592235 22592880 -6411776 - RSP Satellite Satellite 0 636 1 1 757 5537 12 64 1 chrUextra 22592980 22593640 -6411016 - R1_DM LINE R1 -1317 4039 3339 1 757 627 37 0 0 chrUextra 22593740 22593821 -6410835 + ARS406_DM Unknown Unknown 78 158 -195 1 757 3559 272 43 28 chrUextra 22593821 22595160 -6409496 - SAR_DM Satellite Satellite -208 1359 1 1 757 5838 12 1 0 chrUextra 22595260 22595919 -6408737 + MICROPIA_I LTR Gypsy 655 1314 -3162 1 757 4504 6 1 1 chrUextra 22596020 22596680 -6407976 - DM412B_LTR LTR Gypsy -62 509 1 1 757 5475 18 68 1 chrUextra 22596780 22597440 -6407216 + R1_DM LINE R1 3156 3859 -1497 1 757 1212 15 0 0 chrUextra 22597799 22597934 -6406722 - 5S_DM RNA RNA 0 135 1 1 757 3117 171 8 14 chrUextra 22598309 22598960 -6405696 - SAR_DM Satellite Satellite -396 1076 430 1 757 1022 109 0 0 chrUextra 22599060 22599198 -6405458 + Gypsy12_I LTR Gypsy 1684 1821 -3725 1 757 3707 83 50 15 chrUextra 22599195 22599720 -6404936 + Gypsy12_I LTR Gypsy 4465 5007 -539 1 757 246 32 0 0 chrUextra 22600748 22600779 -6403877 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 757 541 208 16 16 chrUextra 22600779 22600906 -6403750 + HETRP_DM Satellite Satellite 1549 1675 -197 1 757 192 40 0 0 chrUextra 22601059 22601084 -6403572 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 757 495 224 16 16 chrUextra 22601084 22601211 -6403445 + HETRP_DM Satellite Satellite 1549 1675 -197 1 757 3069 188 8 6 chrUextra 22601340 22602000 -6402656 - SAR_DM Satellite Satellite -552 920 260 1 757 342 0 0 0 chrUextra 22602100 22602138 -6402518 + (TTCTC)n Simple_repeat Simple_repeat 4 41 0 1 757 5705 11 1 5 chrUextra 22602860 22603520 -6401136 - Gypsy4_I LTR Gypsy -4625 1663 1006 1 757 5958 3 0 0 chrUextra 22603620 22604280 -6400376 - R1_DM LINE R1 -1664 3692 3033 1 757 21 57 0 0 chrUextra 22604401 22604436 -6400220 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 1274 18 0 12 chrUextra 22604436 22604602 -6400054 - NTS_DM Other Other -39 201 38 1 757 907 9 0 27 chrUextra 22604602 22604714 -6399942 - NTS_DM Other Other -107 133 25 1 757 1304 18 0 6 chrUextra 22604766 22604931 -6399725 - NTS_DM Other Other -39 201 38 1 757 888 28 0 0 chrUextra 22604931 22605039 -6399617 - NTS_DM Other Other -107 133 26 1 757 3078 169 17 8 chrUextra 22605151 22605799 -6398857 + SAR_DM Satellite Satellite 326 979 -493 1 757 5066 46 8 1 chrUextra 22605900 22606560 -6398096 - HETA LINE telomeric -1090 4991 4328 1 757 4139 4 0 6 chrUextra 22606661 22607137 -6397519 + BATUMI_I LTR Pao 7491 7963 0 1 757 1369 28 0 38 chrUextra 22607137 22607320 -6397336 + BATUMI_I LTR Pao 7002 7177 -786 1 757 344 188 50 29 chrUextra 22607421 22607557 -6397099 + TART LINE telomeric 6004 6105 -8372 1 757 1704 108 168 7 chrUextra 22607585 22608032 -6396624 + TART LINE telomeric 6734 7252 -7225 1 757 582 49 0 0 chrUextra 22608183 22608265 -6396391 + MDG1_I LTR Gypsy 6170 6251 -345 1 757 786 43 226 73 chrUextra 22608265 22608442 -6396214 + MDG1_I LTR Gypsy 6393 6596 0 1 757 383 68 17 0 chrUextra 22608461 22608520 -6396136 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 757 1941 105 10 3 chrUextra 22608532 22608820 -6395836 + MDG1_LTR LTR Gypsy 123 412 -30 1 757 3116 177 9 9 chrUextra 22608940 22609600 -6395056 - SAR_DM Satellite Satellite -471 1001 342 1 757 5592 20 18 1 chrUextra 22609700 22610360 -6394296 + DOC2_DM LINE Jockey 1488 2158 -2635 1 757 5882 0 3 3 chrUextra 22610464 22611120 -6393536 + SSU-rRNA_Dme rRNA rRNA 708 1363 -632 1 757 2952 171 29 12 chrUextra 22611222 22611878 -6392778 - SAR_DM Satellite Satellite -464 1008 342 1 757 28 48 0 0 chrUextra 22612042 22612084 -6392572 + AT_rich Low_complexity Low_complexity 1 42 0 1 757 32 0 0 0 chrUextra 22612412 22612444 -6392212 + AT_rich Low_complexity Low_complexity 1 32 0 1 757 558 0 0 0 chrUextra 22612576 22612640 -6392016 + SSU-rRNA_Dme rRNA rRNA 1 64 -1931 1 757 2224 65 28 3 chrUextra 22612744 22613068 -6391588 - QUASIMODO_I LTR Gypsy -5699 361 30 1 757 2226 73 0 3 chrUextra 22613075 22613379 -6391277 - QUASIMODO_LTR LTR Gypsy -51 607 305 1 757 4810 20 68 3 chrUextra 22613499 22614158 -6390498 + R1_DM LINE R1 3347 4048 -1308 1 757 4482 71 21 14 chrUextra 22614262 22614915 -6389741 + R1_DM LINE R1 1 658 -4698 1 757 4780 65 15 1 chrUextra 22615017 22615676 -6388980 + TART_B1 LINE telomeric 2725 3392 -7262 1 757 647 139 0 16 chrUextra 22615777 22615901 -6388755 + ARS406_DM Unknown Unknown 38 159 -194 1 757 1259 164 20 27 chrUextra 22615898 22616199 -6388457 - SAR_DM Satellite Satellite -678 794 496 1 757 943 166 27 31 chrUextra 22616211 22616435 -6388221 - SAR_DM Satellite Satellite -684 788 566 1 757 2426 120 11 29 chrUextra 22616542 22617194 -6387462 - DMSAT6 Satellite Satellite 0 640 1 1 757 1214 304 28 48 chrUextra 22618062 22618709 -6385947 + Invader6_I LTR Gypsy 1578 2211 -1888 1 757 5732 3 0 1 chrUextra 22618812 22619471 -6385185 - SSU-rRNA_Dme rRNA rRNA -1319 676 19 1 757 1042 21 0 7 chrUextra 22619571 22619717 -6384939 + NTS_DM Other Other 57 201 -39 1 757 21 57 0 0 chrUextra 22619717 22619752 -6384904 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 870 9 0 27 chrUextra 22619778 22619890 -6384766 + NTS_DM Other Other 25 133 -107 1 757 1252 18 0 6 chrUextra 22619890 22620055 -6384601 + NTS_DM Other Other 38 201 -39 1 757 21 57 0 0 chrUextra 22620055 22620090 -6384566 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 811 19 9 27 chrUextra 22620116 22620227 -6384429 + NTS_DM Other Other 25 133 -107 1 757 643 314 62 43 chrUextra 22620337 22620983 -6383673 + MDG1_I LTR Gypsy 2081 2738 -3858 1 757 3458 253 25 32 chrUextra 22621094 22623266 -6381390 - SAR_DM Satellite Satellite -435 2157 1 1 757 2456 108 114 37 chrUextra 22623529 22624019 -6380637 + Gypsy12_I LTR Gypsy 223 750 -4796 1 757 2822 0 0 68 chrUextra 22624884 22625254 -6379402 - LSU-rRNA_Dme rRNA rRNA -3555 345 1 1 757 21 95 0 0 chrUextra 22625266 22625329 -6379327 + AT_rich Low_complexity Low_complexity 1 63 0 1 757 2797 176 14 11 chrUextra 22625643 22626302 -6378354 + SAR_DM Satellite Satellite 296 956 -516 1 757 245 125 46 15 chrUextra 22626920 22626985 -6377671 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 757 5424 0 2 2 chrUextra 22627196 22627820 -6376836 - SSU-rRNA_Dme rRNA rRNA 0 1995 1372 1 757 2337 76 34 52 chrUextra 22627920 22628579 -6376077 - DMSAT6 Satellite Satellite -83 646 1 1 757 5756 3 1 0 chrUextra 22628679 22629338 -6375318 - LSU-rRNA_Dme rRNA rRNA -275 3625 2966 1 757 5463 5 0 0 chrUextra 22629466 22630097 -6374559 + LSU-rRNA_Dme rRNA rRNA 1788 2418 -1482 1 757 5427 12 1 0 chrUextra 22630197 22630856 -6373800 + STALKER4_I LTR Gypsy 5258 5917 -613 1 757 1301 6 0 18 chrUextra 22631039 22631204 -6373452 - NTS_DM Other Other -78 162 1 1 757 1811 13 17 13 chrUextra 22631204 22631443 -6373213 - NTS_DM Other Other 0 240 1 1 757 1232 0 23 17 chrUextra 22631443 22631615 -6373041 - NTS_DM Other Other 0 240 68 1 757 5353 3 36 0 chrUextra 22631715 22632372 -6372284 + Invader2_I LTR Gypsy 3524 4204 -388 1 757 2501 23 13 0 chrUextra 22632474 22632779 -6371877 - CIRCE LINE Composite -6047 309 1 1 757 2916 31 0 0 chrUextra 22632779 22633133 -6371523 - CIRCE LINE Composite 0 6356 6003 1 757 2222 99 9 35 chrUextra 22633233 22633892 -6370764 + DMSAT6 Satellite Satellite 1 641 0 1 757 1413 58 0 0 chrUextra 22633992 22634197 -6370459 - BATUMI_I LTR Pao -456 7507 7303 1 757 3145 38 14 12 chrUextra 22634220 22634651 -6370005 + BATUMI_I LTR Pao 6427 6858 -1105 1 757 2600 181 6 27 chrUextra 22634770 22635406 -6369250 - SAR_DM Satellite Satellite -354 1118 496 1 757 4892 61 1 6 chrUextra 22635510 22636169 -6368487 + BATUMI_I LTR Pao 3496 4151 -3812 1 757 1650 5 0 0 chrUextra 22636269 22636459 -6368197 + Invader2_LTR LTR Gypsy 77 266 0 1 757 3673 15 2 0 chrUextra 22636459 22636928 -6367728 + Invader2_I LTR Gypsy 1 470 -4122 1 757 5693 1 0 0 chrUextra 22637787 22638446 -6366210 + R1_DM LINE R1 1317 1975 -3381 1 757 2412 201 30 5 chrUextra 22638546 22639185 -6365471 - SAR_DM Satellite Satellite -487 985 331 1 757 2090 4 0 0 chrUextra 22639305 22639544 -6365112 + Gypsy6_I LTR Gypsy 6774 7012 0 1 757 2282 74 32 20 chrUextra 22639546 22639954 -6364702 + Gypsy6A_LTR LTR Gypsy 1 412 -8 1 757 1724 14 0 5 chrUextra 22640064 22640275 -6364381 - STALKER4_LTR LTR Gypsy -192 210 1 1 757 3167 18 9 18 chrUextra 22640275 22640723 -6363933 - STALKER4_I LTR Gypsy 0 6530 6087 1 757 1933 173 19 6 chrUextra 22640823 22641463 -6363193 + SAR_DM Satellite Satellite 1 647 -645 1 757 4326 12 0 0 chrUextra 22641582 22642098 -6362558 - STALKER4_I LTR Gypsy -1585 4945 4430 1 757 1175 14 0 0 chrUextra 22642102 22642241 -6362415 - STALKER4_I LTR Gypsy -2364 4166 4028 1 757 2076 114 90 78 chrUextra 22642361 22642511 -6362145 + FB4_DM DNA Tc1 173 321 -3768 1 757 199 0 31 31 chrUextra 22642511 22642543 -6362113 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 757 2076 114 90 78 chrUextra 22642543 22642927 -6361729 + FB4_DM DNA Tc1 322 713 -3376 1 757 430 82 0 0 chrUextra 22642928 22642989 -6361667 - FB4_DM DNA Tc1 -4027 62 2 1 757 1321 222 84 75 chrUextra 22643102 22643759 -6360897 - Gypsy12A_LTR LTR Gypsy -178 2102 1440 1 757 4484 60 69 0 chrUextra 22643867 22644517 -6360139 + DM297_I LTR Gypsy 2910 3604 -2563 1 757 4565 67 4 5 chrUextra 22644625 22645277 -6359379 + BATUMI_I LTR Pao 4315 5125 -2789 1 757 5587 3 0 0 chrUextra 22646136 22646795 -6357861 + DOC LINE Jockey 1576 2234 -2491 1 757 2689 178 8 9 chrUextra 22646896 22647530 -6357126 - SAR_DM Satellite Satellite -645 827 195 1 757 771 86 0 0 chrUextra 22647437 22647554 -6357102 + ARS406_DM Unknown Unknown 1 117 -236 1 757 817 134 129 41 chrUextra 22647654 22647848 -6356808 + Gypsy12A_LTR LTR Gypsy 2070 2280 0 1 757 234 247 43 43 chrUextra 22648220 22648313 -6356343 - DOC3_DM LINE Jockey -2159 2581 2489 1 757 1398 6 0 0 chrUextra 22648413 22648581 -6356075 - ACCORD_I LTR Gypsy -6120 168 1 1 757 4242 4 0 0 chrUextra 22648581 22649072 -6355584 - ACCORD_LTR LTR Gypsy 0 558 68 1 757 28 48 0 0 chrUextra 22649191 22649233 -6355423 + AT_rich Low_complexity Low_complexity 1 42 0 1 757 32 0 0 0 chrUextra 22649561 22649593 -6355063 + AT_rich Low_complexity Low_complexity 1 32 0 1 757 859 0 9 9 chrUextra 22649725 22649831 -6354825 + SSU-rRNA_Dme rRNA rRNA 1 106 -1889 1 757 5344 27 1 0 chrUextra 22649931 22650590 -6354066 + MAX_I LTR Pao 4768 5427 -2487 1 757 2586 192 16 23 chrUextra 22650690 22651349 -6353307 + SAR_DM Satellite Satellite 1 654 -227 1 757 5354 9 2 2 chrUextra 22651468 22652108 -6352548 + R1_DM LINE R1 3726 4365 -991 1 757 2910 169 12 9 chrUextra 22652222 22652867 -6351789 + SAR_DM Satellite Satellite 369 1015 -457 1 757 2797 181 15 9 chrUextra 22652967 22653621 -6351035 - SAR_DM Satellite Satellite -603 869 212 1 757 2346 112 21 63 chrUextra 22653726 22654201 -6350455 + TART LINE telomeric 2908 3362 -11115 1 757 1141 98 0 32 chrUextra 22654196 22654385 -6350271 + TART LINE telomeric 3683 3865 -10612 1 757 3664 18 0 0 chrUextra 22654485 22654923 -6349733 - R1_DM LINE R1 -893 4463 4026 1 757 1677 14 0 24 chrUextra 22654933 22655144 -6349512 - R1_DM LINE R1 -1690 3666 3461 1 757 3054 50 0 5 chrUextra 22655245 22655646 -6349010 + R1_DM LINE R1 193 591 -4765 1 757 2044 26 19 0 chrUextra 22655636 22655903 -6348753 + R1_DM LINE R1 796 1067 -4289 1 757 315 0 0 0 chrUextra 22656003 22656038 -6348618 + (TATTG)n Simple_repeat Simple_repeat 1 35 0 1 757 1314 78 0 0 chrUextra 22656040 22656220 -6348436 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 757 1313 56 6 0 chrUextra 22656223 22656402 -6348254 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 1 757 1500 22 0 0 chrUextra 22656419 22656599 -6348057 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 757 420 37 0 0 chrUextra 22656608 22656662 -6347994 + (TTCTC)n Simple_repeat Simple_repeat 4 57 0 1 757 5584 11 0 0 chrUextra 22656764 22657421 -6347235 - DOC2_DM LINE Jockey -914 3879 3223 1 757 5643 9 0 0 chrUextra 22657521 22658180 -6346476 + DOC2_DM LINE Jockey 3473 4131 -662 1 757 1664 0 10 0 chrUextra 22658280 22658484 -6346172 - QUASIMODO_LTR LTR Gypsy -452 206 1 1 757 203 164 32 16 chrUextra 22658484 22658546 -6346110 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 757 345 91 0 0 chrUextra 22658867 22658922 -6345734 + PROTOP_A DNA P 219 273 -832 1 757 4510 43 95 0 chrUextra 22659043 22659698 -6344958 - DMCR1A LINE CR1 -1914 2556 1840 1 757 2820 180 14 12 chrUextra 22659800 22660457 -6344199 - SAR_DM Satellite Satellite -369 1103 446 1 757 325 139 81 22 chrUextra 22660557 22660667 -6343989 + TART LINE telomeric 10403 10489 -3988 1 757 287 122 81 30 chrUextra 22660719 22660819 -6343837 + TART LINE telomeric 10421 10489 -3988 1 757 1228 33 0 0 chrUextra 22660959 22661111 -6343545 + PROTOP_B DNA P 1 152 -1001 1 757 492 34 0 0 chrUextra 22661110 22661169 -6343487 + PROTOP_A DNA P 455 513 -592 1 757 5534 18 1 0 chrUextra 22661316 22661975 -6342681 - STALKER4_I LTR Gypsy -2060 4470 3811 1 757 5634 1 0 3 chrUextra 22662075 22662734 -6341922 + R1_DM LINE R1 1405 2061 -3295 1 757 1047 8 0 0 chrUextra 22662834 22662957 -6341699 - NTS_DM Other Other -117 123 1 1 757 1704 21 17 21 chrUextra 22662957 22663198 -6341458 - NTS_DM Other Other 0 240 1 1 757 1408 20 20 20 chrUextra 22663198 22663401 -6341255 - NTS_DM Other Other 0 240 38 1 757 735 22 0 0 chrUextra 22663401 22663493 -6341163 - NTS_DM Other Other -107 133 42 1 757 2679 168 33 12 chrUextra 22663599 22664237 -6340419 - SAR_DM Satellite Satellite -593 879 229 1 757 466 84 0 0 chrUextra 22664181 22664252 -6340404 + ARS406_DM Unknown Unknown 1 71 -282 1 757 997 104 11 11 chrUextra 22664356 22664531 -6340125 + SAR_DM Satellite Satellite 729 903 -569 1 757 1967 185 7 9 chrUextra 22664546 22665010 -6339646 + SAR_DM Satellite Satellite 496 958 -514 1 757 619 296 49 44 chrUextra 22665113 22665349 -6339307 + Gypsy4_I LTR Gypsy 2393 2970 -4552 1 757 1371 47 24 0 chrUextra 22665349 22665562 -6339094 + TLD2 Unknown Unknown 1 218 0 1 757 619 296 49 44 chrUextra 22665562 22665709 -6338947 + Gypsy4_I LTR Gypsy 2971 3335 -4187 1 757 457 70 670 0 chrUextra 22665941 22666056 -6338600 - ROVER-LTR_DM LTR Gypsy -121 246 55 1 757 3571 44 8 0 chrUextra 22666052 22666529 -6338127 - I_DM LINE I -5045 1186 706 1 757 1213 41 90 0 chrUextra 22666629 22666873 -6337783 - PROTOP_B DNA P -399 754 520 1 757 1742 53 0 0 chrUextra 22666860 22667086 -6337570 - PROTOP_A DNA P -806 299 74 1 757 4740 39 0 0 chrUextra 22667388 22668011 -6336645 + I_DM LINE I 564 1186 -5045 1 757 305 25 0 0 chrUextra 22668007 22668047 -6336609 + ROVER-LTR_DM LTR Gypsy 55 94 -273 1 757 4275 85 84 0 chrUextra 22668149 22668806 -6335850 + TART LINE telomeric 946 1657 -12820 1 757 5060 5 0 30 chrUextra 22668906 22669565 -6335091 + ROO_I LTR Pao 402 1040 -7216 1 757 210 37 0 0 chrUextra 22669821 22669848 -6334808 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 757 511 193 16 16 chrUextra 22669848 22669969 -6334687 + HETRP_DM Satellite Satellite 1549 1669 -203 1 757 687 179 6 50 chrUextra 22670113 22670272 -6334384 + HETRP_DM Satellite Satellite 1518 1669 -203 1 757 2843 182 12 8 chrUextra 22670424 22671083 -6333573 - SAR_DM Satellite Satellite -555 917 256 1 757 336 123 0 0 chrUextra 22671183 22671240 -6333416 - ROO_I LTR Pao -2768 5488 5432 1 757 4628 23 47 0 chrUextra 22671222 22671841 -6332815 - ROO_I LTR Pao -2970 5286 4639 1 757 2833 181 12 11 chrUextra 22671942 22672601 -6332055 + SAR_DM Satellite Satellite 272 931 -541 1 757 326 23 0 23 chrUextra 22674226 22674270 -6330386 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 757 379 0 19 56 chrUextra 22674978 22675032 -6329624 - NTS_DM Other Other -164 76 25 1 757 1252 18 0 6 chrUextra 22675084 22675249 -6329407 - NTS_DM Other Other -39 201 38 1 757 870 9 0 27 chrUextra 22675249 22675361 -6329295 - NTS_DM Other Other -107 133 25 1 757 22 56 0 0 chrUextra 22675387 22675423 -6329233 + AT_rich Low_complexity Low_complexity 1 36 0 1 94 255 125 0 0 chrUextra 22675436 22675476 -6329180 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 758 246 150 0 0 chrUextra 22675519 22675559 -6329097 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 758 721 0 0 0 chrUextra 22675737 22675819 -6328837 + LSU-rRNA_Dme rRNA rRNA 2570 2651 -1249 1 758 4979 3 0 0 chrUextra 22675817 22676396 -6328260 + R1_DM LINE R1 4708 5286 -70 1 758 1286 28 0 0 chrUextra 22676496 22676673 -6327983 + FW_DM LINE Jockey 4516 4692 0 1 758 3676 46 2 4 chrUextra 22676673 22677155 -6327501 - R1_DM LINE R1 -3963 1393 913 1 758 5680 5 0 0 chrUextra 22677255 22677914 -6326742 + R1_DM LINE R1 3996 4654 -702 1 758 459 0 0 0 chrUextra 22678014 22678065 -6326591 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 1 758 2572 178 9 22 chrUextra 22678788 22679419 -6325237 - SAR_DM Satellite Satellite -354 1118 496 1 758 3151 62 47 0 chrUextra 22679739 22680191 -6324465 - PROTOP_A DNA P 0 1105 633 1 758 5391 11 26 6 chrUextra 22680291 22680950 -6323706 + R2_DM LINE R2 2619 3290 -317 1 758 518 15 0 0 chrUextra 22681809 22681877 -6322779 + NTS_DM Other Other 66 133 -107 1 758 1202 30 0 6 chrUextra 22681877 22682042 -6322614 + NTS_DM Other Other 38 201 -39 1 758 870 9 0 27 chrUextra 22682094 22682206 -6322450 + NTS_DM Other Other 25 133 -107 1 758 1252 18 0 6 chrUextra 22682206 22682371 -6322285 + NTS_DM Other Other 38 201 -39 1 758 328 0 0 67 chrUextra 22682423 22682468 -6322188 + NTS_DM Other Other 25 66 -174 1 758 306 266 39 24 chrUextra 22682569 22682696 -6321960 - XDMR Unknown Unknown -232 129 1 1 758 2542 177 11 3 chrUextra 22682587 22683153 -6321503 + SAR_DM Satellite Satellite 247 816 -656 1 758 440 208 75 0 chrUextra 22683053 22683173 -6321483 - XDMR Unknown Unknown 0 361 233 1 758 411 127 0 0 chrUextra 22683152 22683223 -6321433 - ARS406_DM Unknown Unknown -282 71 1 1 758 2408 193 11 14 chrUextra 22683327 22683958 -6320698 - SAR_DM Satellite Satellite -649 823 195 1 758 725 107 0 0 chrUextra 22683865 22683986 -6320670 + ARS406_DM Unknown Unknown 1 121 -232 1 758 5717 1 0 1 chrUextra 22684086 22684745 -6319911 - LSU-rRNA_Dme rRNA rRNA -1435 2465 1808 1 758 5227 33 1 0 chrUextra 22684845 22685503 -6319153 + MDG1_I LTR Gypsy 3310 3968 -2628 1 758 2438 80 21 9 chrUextra 22685604 22686263 -6318393 - DMSAT6 Satellite Satellite -34 666 1 1 758 5387 24 1 0 chrUextra 22686365 22687022 -6317634 + FW_DM LINE Jockey 3126 3783 -909 1 758 1287 0 0 0 chrUextra 22687122 22687275 -6317381 + DM176_I LTR Gypsy 6268 6420 0 1 758 2828 55 49 67 chrUextra 22687275 22687779 -6316877 + DM176_LTR LTR Gypsy 1 481 -26 1 758 742 0 0 0 chrUextra 22687881 22687966 -6316690 + R1_DM LINE R1 5272 5356 0 1 758 5005 2 0 2 chrUextra 22687964 22688540 -6316116 + LSU-rRNA_Dme rRNA rRNA 2640 3214 -686 1 758 301 0 0 0 chrUextra 22688640 22688679 -6315977 - DMSAT6 Satellite Satellite -98 372 334 1 758 2432 97 8 33 chrUextra 22688692 22689299 -6315357 - DMSAT6 Satellite Satellite -3 592 1 1 758 2677 167 20 23 chrUextra 22689401 22690051 -6314605 + SAR_DM Satellite Satellite 256 903 -569 1 758 2650 141 1 1 chrUextra 22690171 22690817 -6313839 + G_DM LINE Jockey 635 1280 -762 1 758 2224 78 0 3 chrUextra 22690917 22691215 -6313441 + Gypsy12_I LTR Gypsy 5250 5546 0 1 758 1592 184 14 23 chrUextra 22691214 22691565 -6313091 + Gypsy12_LTR LTR Gypsy 1 348 -1988 1 758 2244 84 5 57 chrUextra 22691676 22692334 -6312322 - DMSAT6 Satellite Satellite -73 623 1 1 758 418 100 0 0 chrUextra 22692436 22692496 -6312160 + DNAREP1_DM LINE Penelope 177 236 -358 1 758 212 0 0 35 chrUextra 22692526 22692555 -6312101 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 758 5274 15 6 1 chrUextra 22693953 22694612 -6310044 + STALKER4_I LTR Gypsy 2410 3071 -3459 1 758 5753 1 0 0 chrUextra 22695471 22696130 -6308526 + Gypsy4_I LTR Gypsy 5306 5964 -324 1 758 2195 110 18 30 chrUextra 22696230 22696888 -6307768 + DMSAT6 Satellite Satellite 1 649 -3 1 758 5443 15 0 0 chrUextra 22696989 22697648 -6307008 - NINJA_I LTR Pao -4923 1088 430 1 758 4993 31 3 26 chrUextra 22697748 22698407 -6306249 - CIRCE LINE Composite -3488 2868 2225 1 758 5727 1 0 1 chrUextra 22698507 22699166 -6305490 + LSU-rRNA_Dme rRNA rRNA 1860 2517 -1383 1 758 2824 168 12 12 chrUextra 22699272 22699924 -6304732 - SAR_DM Satellite Satellite -396 1076 425 1 758 628 297 47 48 chrUextra 22700030 22700673 -6303983 - SAR_DM Satellite Satellite -576 896 255 1 758 5090 35 1 0 chrUextra 22700788 22701443 -6303213 + MDG1_I LTR Gypsy 2982 3637 -2959 1 758 2601 163 26 43 chrUextra 22701544 22702199 -6302457 + SAR_DM Satellite Satellite 205 848 -624 1 758 4528 96 5 5 chrUextra 22703061 22703720 -6300936 - Gypsy12_I LTR Gypsy -2887 2659 2001 1 758 5402 20 1 3 chrUextra 22703820 22704479 -6300177 + LSU-rRNA_Dme rRNA rRNA 835 1492 -2408 1 758 4533 52 23 6 chrUextra 22704595 22705238 -6299418 + IVK_DM LINE I 1538 2191 -3211 1 758 5582 11 0 0 chrUextra 22705341 22705997 -6298659 - DMRT1A LINE R1 -320 4863 4208 1 758 4167 25 14 4 chrUextra 22706097 22706756 -6297900 + Transib5 DNA Transib 1132 1836 -1165 1 758 3216 131 33 17 chrUextra 22706858 22707458 -6297198 - Stalker2_I LTR Gypsy -6551 851 242 1 758 21 89 0 0 chrUextra 22707979 22708035 -6296621 + AT_rich Low_complexity Low_complexity 1 56 0 1 758 1940 0 0 0 chrUextra 22708054 22708274 -6296382 - SSU-rRNA_Dme rRNA rRNA 0 1995 1776 1 758 2418 16 0 7 chrUextra 22708376 22708680 -6295976 - ROVER-LTR_DM LTR Gypsy -65 302 1 1 758 2746 11 6 3 chrUextra 22708680 22709033 -6295623 - ROVER-I_DM LTR Gypsy 0 6584 6231 1 758 4478 53 154 0 chrUextra 22709136 22709792 -6294864 + TART_B1 LINE telomeric 2744 3500 -7154 1 758 2603 198 11 20 chrUextra 22709894 22710550 -6294106 - SAR_DM Satellite Satellite -662 650 1 1 758 4682 34 53 0 chrUextra 22710651 22711310 -6293346 + R1_DM LINE R1 2262 2955 -2401 1 758 4739 46 15 18 chrUextra 22711410 22712069 -6292587 - R1_DM LINE R1 -4102 1254 598 1 758 2869 170 8 9 chrUextra 22712194 22712828 -6291828 - SAR_DM Satellite Satellite -396 1076 444 1 758 5446 26 0 0 chrUextra 22713687 22714346 -6290310 + BATUMI_I LTR Pao 4673 5331 -2632 1 758 349 289 19 19 chrUextra 22714504 22714666 -6289990 - MDG3_I LTR Gypsy -1562 3424 3263 1 758 322 314 7 7 chrUextra 22714952 22715093 -6289563 - Invader3_I LTR Gypsy -1859 3029 2889 1 758 1409 5 0 112 chrUextra 22715205 22715419 -6289237 - DM176_LTR LTR Gypsy -317 190 1 1 758 191 61 30 0 chrUextra 22715421 22715454 -6289202 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1 758 326 69 0 79 chrUextra 22715456 22715519 -6289137 + BATUMI_I LTR Pao 712 769 -7194 1 758 1145 114 20 78 chrUextra 22715567 22715862 -6288794 + BATUMI_I LTR Pao 756 1033 -6930 1 758 3149 151 14 9 chrUextra 22715967 22716623 -6288033 + SAR_DM Satellite Satellite 378 1036 -436 1 758 253 348 95 7 chrUextra 22717001 22717296 -6287360 - BLASTOPIA_I LTR Gypsy -1 4480 4160 1 758 3049 162 20 6 chrUextra 22717483 22718141 -6286515 - SAR_DM Satellite Satellite -428 1044 378 1 758 5084 23 1 5 chrUextra 22718241 22718900 -6285756 - IDEFIX_I LTR Gypsy -1570 4058 3402 1 758 1587 5 0 0 chrUextra 22719452 22719657 -6284999 + (TTCTC)n Simple_repeat Simple_repeat 1 205 0 1 758 5396 9 0 0 chrUextra 22719759 22720418 -6284238 + ROO_I LTR Pao 4642 5300 -2956 1 758 2648 175 14 26 chrUextra 22720519 22721169 -6283487 + SAR_DM Satellite Satellite 469 1110 -362 1 758 246 189 0 0 chrUextra 22721124 22721177 -6283479 - XDMR Unknown Unknown 0 361 309 1 758 3185 73 4 73 chrUextra 22721378 22721936 -6282720 + CIRCE LINE Composite 4981 5499 -857 1 758 1659 179 5 9 chrUextra 22722796 22723454 -6281202 + SAR_DM Satellite Satellite 1 654 -558 1 758 1367 25 0 0 chrUextra 22723554 22723717 -6280939 + R1_DM LINE R1 1666 1828 -3528 1 758 2749 41 0 0 chrUextra 22723715 22724060 -6280596 + R1_DM LINE R1 1317 1661 -3695 1 758 1384 30 0 0 chrUextra 22724047 22724213 -6280443 + R1_DM LINE R1 1907 2072 -3284 1 758 2519 189 24 26 chrUextra 22724313 22724972 -6279684 - SAR_DM Satellite Satellite -673 657 1 1 758 2252 100 1 35 chrUextra 22725832 22726490 -6278166 + DMSAT6 Satellite Satellite 1 635 -82 1 758 4717 18 18 21 chrUextra 22726590 22727208 -6277448 - ROO_I LTR Pao -7640 616 1 1 758 332 24 0 0 chrUextra 22727208 22727249 -6277407 - ROO_LTR LTR Pao 0 428 388 1 758 1390 6 0 0 chrUextra 22727367 22727529 -6277127 + DM176_LTR LTR Gypsy 122 283 -224 1 758 2016 20 16 0 chrUextra 22727530 22727783 -6276873 + DM176_LTR LTR Gypsy 251 507 0 1 758 1911 13 0 0 chrUextra 22727783 22728008 -6276648 + DM176_I LTR Gypsy 1 225 -6195 1 758 336 0 0 0 chrUextra 22728108 22728148 -6276508 - TLD3 Unknown Unknown -131 41 2 1 758 1786 271 16 14 chrUextra 22728126 22728766 -6275890 + ROVER-I_DM LTR Gypsy 2576 3216 -3368 1 758 254 306 0 0 chrUextra 22729228 22729313 -6275343 + ACCORD_I LTR Gypsy 1981 2065 -4223 1 758 234 267 22 22 chrUextra 22730587 22730679 -6273977 + (CATA)n Simple_repeat Simple_repeat 2 93 0 1 758 21 0 0 0 chrUextra 22730850 22730871 -6273785 + AT_rich Low_complexity Low_complexity 1 21 0 1 758 3115 25 7 7 chrUextra 22731150 22731556 -6273100 + ROO_I LTR Pao 3800 4205 -4051 1 758 1979 24 0 0 chrUextra 22731552 22731799 -6272857 - FW_DM LINE Jockey 0 4692 4446 1 758 23 68 0 0 chrUextra 22731969 22732013 -6272643 + AT_rich Low_complexity Low_complexity 1 44 0 1 758 3071 160 11 9 chrUextra 22732657 22733315 -6271341 + SAR_DM Satellite Satellite 368 1026 -446 1 758 28 29 0 0 chrUextra 22733577 22733612 -6271044 + AT_rich Low_complexity Low_complexity 1 35 0 1 758 2110 35 0 28 chrUextra 22733631 22733922 -6270734 + BATUMI_I LTR Pao 7002 7284 -679 1 758 996 73 7 7 chrUextra 22733922 22734073 -6270583 + BATUMI_I LTR Pao 1 151 -7812 1 758 5378 11 0 0 chrUextra 22734173 22734831 -6269825 - DM176_I LTR Gypsy -3920 2500 1843 1 758 1218 164 8 25 chrUextra 22735689 22735927 -6268729 - Gypsy12_LTR LTR Gypsy -2102 234 1 1 758 2956 73 10 2 chrUextra 22735926 22736325 -6268331 - Gypsy12_I LTR Gypsy 0 5546 5145 1 758 5335 32 1 0 chrUextra 22736447 22737105 -6267551 - R1_DM LINE R1 -3250 2106 1448 1 758 679 108 0 0 chrUextra 22737205 22737316 -6267340 - ARS406_DM Unknown Unknown -242 111 1 1 758 2496 171 48 19 chrUextra 22737223 22737862 -6266794 + SAR_DM Satellite Satellite 195 852 -620 1 758 5685 1 0 0 chrUextra 22737963 22738621 -6266035 - R1_DM LINE R1 -2448 2908 2251 1 758 1059 94 0 0 chrUextra 22738730 22738910 -6265746 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 1 758 2404 67 0 0 chrUextra 22738920 22739247 -6265409 + ACCORD2_I LTR Gypsy 3753 4079 -3133 1 758 981 45 0 8 chrUextra 22739246 22739379 -6265277 + ACCORD2_I LTR Gypsy 5960 6091 -1121 1 758 3325 0 0 3 chrUextra 22739479 22739862 -6264794 + LSU-rRNA_Dme rRNA rRNA 3519 3900 0 1 758 22 56 0 0 chrUextra 22739934 22739970 -6264686 + AT_rich Low_complexity Low_complexity 1 36 0 1 758 246 150 0 0 chrUextra 22739975 22740015 -6264641 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 758 246 150 0 0 chrUextra 22740067 22740107 -6264549 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 758 1467 186 40 9 chrUextra 22740237 22740892 -6263764 - SAR_DM Satellite Satellite -843 675 1 1 758 5611 1 0 5 chrUextra 22740995 22741653 -6263003 - FW_DM LINE Jockey -595 4097 3443 1 758 1011 9 0 0 chrUextra 22742292 22742408 -6262248 + (TTGTG)n Simple_repeat Simple_repeat 1 116 0 1 758 663 235 14 165 chrUextra 22742511 22742796 -6261860 - HMSBEAGLE_I LTR Gypsy -478 6051 5810 1 758 2970 167 14 9 chrUextra 22743269 22743927 -6260729 + SAR_DM Satellite Satellite 342 1002 -470 1 758 30 0 0 0 chrUextra 22744029 22744059 -6260597 + AT_rich Low_complexity Low_complexity 1 30 0 1 758 28 48 0 0 chrUextra 22744387 22744429 -6260227 + AT_rich Low_complexity Low_complexity 1 42 0 1 758 5639 1 0 0 chrUextra 22744785 22745443 -6259213 + ROO_I LTR Pao 4904 5561 -2695 1 758 5472 2 0 0 chrUextra 22746301 22746929 -6257727 - LSU-rRNA_Dme rRNA rRNA -1485 2415 1788 1 758 2914 175 14 14 chrUextra 22747819 22748475 -6256181 + SAR_DM Satellite Satellite 278 933 -539 1 758 237 132 0 0 chrUextra 22749193 22749231 -6255425 - Gypsy6_I LTR Gypsy -2981 4031 3994 1 758 655 186 7 14 chrUextra 22749502 22749644 -6255012 + HETRP_DM Satellite Satellite 1529 1669 -203 1 758 652 186 7 14 chrUextra 22749786 22749928 -6254728 + HETRP_DM Satellite Satellite 1529 1669 -203 1 758 5427 20 8 0 chrUextra 22750092 22750749 -6253907 - R1_DM LINE R1 -729 4627 3966 1 758 2396 13 0 7 chrUextra 22751609 22751912 -6252744 + Stalker2_I LTR Gypsy 1292 1592 -5810 1 758 1161 13 26 0 chrUextra 22752111 22752265 -6252391 + Stalker2_I LTR Gypsy 1574 1731 -5671 1 758 1034 301 20 24 chrUextra 22752516 22753023 -6251633 - Invader1_I LTR Gypsy -622 2564 2060 1 758 2774 170 21 15 chrUextra 22753124 22753776 -6250880 + SAR_DM Satellite Satellite 267 922 -550 1 758 5218 0 2 2 chrUextra 22753940 22754539 -6250117 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 1 758 5389 30 1 0 chrUextra 22754639 22755297 -6249359 + R1_DM LINE R1 4326 4984 -372 1 758 5159 44 1 1 chrUextra 22755397 22756055 -6248601 - R1_DM LINE R1 -3600 1756 1099 1 758 3019 72 43 20 chrUextra 22756160 22756813 -6247843 - TART LINE telomeric -3814 10663 10276 1 758 2901 163 13 6 chrUextra 22756918 22757548 -6247108 - SAR_DM Satellite Satellite -610 862 229 1 758 470 90 13 0 chrUextra 22757493 22757571 -6247085 + ARS406_DM Unknown Unknown 1 79 -274 1 758 4403 99 23 5 chrUextra 22757671 22758329 -6246327 + Gypsy12_I LTR Gypsy 1991 2660 -2886 1 758 4840 19 3 6 chrUextra 22758466 22759087 -6245569 - PROTOP_A DNA P -87 1018 400 1 758 5739 1 1 0 chrUextra 22759189 22759845 -6244811 - LSU-rRNA_Dme rRNA rRNA -156 3744 3088 1 758 2936 174 8 9 chrUextra 22759954 22760603 -6244053 - SAR_DM Satellite Satellite -569 903 256 1 758 477 233 8 16 chrUextra 22760751 22760873 -6243783 - GTWIN_LTR LTR Gypsy -243 252 132 1 758 1740 233 0 8 chrUextra 22760968 22761361 -6243295 - GTWIN_I LTR Gypsy 0 6421 6032 1 758 1296 0 0 0 chrUextra 22761461 22761608 -6243048 - LSU-rRNA_Dme rRNA rRNA -1966 1934 1788 1 758 3928 4 4 2 chrUextra 22761652 22762119 -6242537 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1321 1 758 5295 24 33 0 chrUextra 22762219 22762877 -6241779 + R1_DM LINE R1 3046 3725 -1631 1 758 2816 172 14 12 chrUextra 22762981 22763635 -6241021 - SAR_DM Satellite Satellite -514 958 304 1 758 1229 22 22 22 chrUextra 22763735 22763920 -6240736 + NTS_DM Other Other 56 240 0 1 758 562 92 35 0 chrUextra 22763920 22764007 -6240649 + NTS_DM Other Other 1 90 -150 1 758 35 24 0 0 chrUextra 22764280 22764322 -6240334 + AT_rich Low_complexity Low_complexity 1 42 0 1 758 3026 6 0 0 chrUextra 22764493 22764841 -6239815 - ROO_LTR LTR Pao -80 348 1 1 758 2584 189 9 11 chrUextra 22765251 22765884 -6238772 - SAR_DM Satellite Satellite -649 823 192 1 758 721 116 0 0 chrUextra 22765788 22765909 -6238747 + ARS406_DM Unknown Unknown 1 121 -232 1 758 3738 19 10 16 chrUextra 22766011 22766506 -6238150 + BATUMI_I LTR Pao 6510 7001 -962 1 758 1461 274 36 51 chrUextra 22766016 22766662 -6237994 - MAX_I LTR Pao -744 7170 6535 1 758 2892 168 17 15 chrUextra 22766767 22767425 -6237231 + SAR_DM Satellite Satellite 389 1047 -425 1 758 5463 20 0 0 chrUextra 22767525 22768183 -6236473 + STALKER4_I LTR Gypsy 4153 4810 -1720 1 758 1888 0 0 0 chrUextra 22769041 22769259 -6235397 + BEL_LTR LTR Pao 144 361 0 1 758 3028 36 39 0 chrUextra 22769259 22769699 -6234957 - PROTOP DNA P -3497 983 527 1 758 835 10 0 0 chrUextra 22769799 22769897 -6234759 - NTS_DM Other Other -142 98 1 1 758 1861 0 17 13 chrUextra 22769897 22770136 -6234520 - NTS_DM Other Other 0 240 1 1 758 1790 4 17 21 chrUextra 22770136 22770377 -6234279 - NTS_DM Other Other 0 240 1 1 758 502 13 50 38 chrUextra 22770377 22770457 -6234199 - NTS_DM Other Other 0 240 160 1 758 5400 27 0 0 chrUextra 22770557 22771215 -6233441 - R1_DM LINE R1 -2513 2843 2186 1 758 5343 27 1 0 chrUextra 22771315 22771973 -6232683 - R1_DM LINE R1 -2021 3335 2677 1 758 4795 2 2 0 chrUextra 22772073 22772622 -6232034 - SSU-rRNA_Dme rRNA rRNA -1445 550 1 1 758 28 0 0 0 chrUextra 22772695 22772723 -6231933 + AT_rich Low_complexity Low_complexity 1 28 0 1 758 2716 32 3 6 chrUextra 22773112 22773462 -6231194 + CIRCE LINE Composite 4981 5329 -1027 1 758 25 0 0 0 chrUextra 22773464 22773489 -6231167 + AT_rich Low_complexity Low_complexity 1 25 0 1 758 2817 179 6 9 chrUextra 22773590 22774231 -6230425 - SAR_DM Satellite Satellite -642 830 192 1 758 681 98 0 9 chrUextra 22774134 22774247 -6230409 + ARS406_DM Unknown Unknown 1 112 -241 1 758 742 88 0 0 chrUextra 22774348 22774462 -6230194 - ARS406_DM Unknown Unknown -238 115 2 1 758 2728 176 8 9 chrUextra 22774367 22775004 -6229652 + SAR_DM Satellite Satellite 192 827 -645 1 758 5207 24 21 6 chrUextra 22775105 22775763 -6228893 + FW_DM LINE Jockey 3979 4646 -46 1 758 367 0 0 0 chrUextra 22775863 22775905 -6228751 - NTS_DM Other Other -198 42 1 1 758 1861 0 17 13 chrUextra 22775905 22776144 -6228512 - NTS_DM Other Other 0 240 1 1 758 1850 4 17 13 chrUextra 22776144 22776383 -6228273 - NTS_DM Other Other 0 240 1 1 758 809 37 29 29 chrUextra 22776383 22776521 -6228135 - NTS_DM Other Other 0 240 103 1 758 3162 164 6 6 chrUextra 22776621 22777279 -6227377 - SAR_DM Satellite Satellite -435 1037 380 1 758 989 81 3 16 chrUextra 22777385 22778037 -6226619 - RSP Satellite Satellite -45 643 1 1 758 2600 93 14 37 chrUextra 22778138 22778795 -6225861 + DMSAT6 Satellite Satellite 1 642 -74 1 758 1168 0 21 7 chrUextra 22778895 22779040 -6225616 + LSU-rRNA_Dme rRNA rRNA 1642 1788 -2112 1 758 4278 2 0 0 chrUextra 22779084 22779553 -6225103 + LSU-rRNA_Dme rRNA rRNA 1788 2256 -1644 1 758 3144 171 12 12 chrUextra 22779653 22780304 -6224352 + SAR_DM Satellite Satellite 253 903 -569 1 758 2954 182 13 6 chrUextra 22781169 22781798 -6222858 - SAR_DM Satellite Satellite -645 827 195 1 758 817 98 0 0 chrUextra 22781705 22781827 -6222829 + ARS406_DM Unknown Unknown 1 122 -231 1 758 3144 184 5 6 chrUextra 22781927 22782584 -6222072 + SAR_DM Satellite Satellite 256 911 -561 1 758 5600 30 1 0 chrUextra 22782685 22783343 -6221313 + MAX_I LTR Pao 4384 5042 -2872 1 758 5463 0 3 1 chrUextra 22783443 22784101 -6220555 + TRANSPAC_I LTR Gypsy 3291 3949 -641 1 758 198 0 0 0 chrUextra 22784321 22784343 -6220313 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 758 3515 5 7 7 chrUextra 22784343 22784756 -6219900 + DM297_LTR LTR Gypsy 2 414 0 1 758 831 20 0 10 chrUextra 22784756 22784859 -6219797 + DM297_I LTR Gypsy 1 102 -6065 1 758 502 75 0 0 chrUextra 22784959 22785026 -6219630 + R2_DM LINE R2 3541 3607 0 1 758 5422 3 0 0 chrUextra 22785022 22785617 -6219039 + LSU-rRNA_Dme rRNA rRNA 2578 3172 -728 1 758 5842 6 0 0 chrUextra 22785717 22786375 -6218281 + G2_DM LINE Jockey 2395 3052 -50 1 758 4553 93 5 3 chrUextra 22786475 22787131 -6217525 + S_DM DNA Tc1 121 777 -959 1 758 2938 180 21 11 chrUextra 22787233 22787890 -6216766 + SAR_DM Satellite Satellite 208 871 -601 1 758 21 89 0 0 chrUextra 22788028 22788084 -6216572 + AT_rich Low_complexity Low_complexity 1 56 0 1 758 2802 21 6 0 chrUextra 22788749 22789076 -6215580 - G5_DM LINE Jockey -23 4833 4505 1 758 2570 48 39 3 chrUextra 22789076 22789407 -6215249 + DMCR1A LINE CR1 3815 4157 -313 1 758 3054 174 26 8 chrUextra 22790266 22790922 -6213734 + SAR_DM Satellite Satellite 195 862 -610 1 758 276 278 22 11 chrUextra 22791454 22791545 -6213111 + Invader4_I LTR Gypsy 1783 1874 -539 1 758 3332 22 76 0 chrUextra 22791781 22792439 -6212217 - FW_DM LINE Jockey -1774 2918 2211 1 758 2833 172 43 21 chrUextra 22792539 22793197 -6211459 - SAR_DM Satellite Satellite -545 927 256 1 758 1167 8 8 0 chrUextra 22793301 22793435 -6211221 + 5S_DM RNA RNA 1 135 0 1 758 1231 0 0 0 chrUextra 22793669 22793804 -6210852 + 5S_DM RNA RNA 1 135 0 1 758 5762 12 5 0 chrUextra 22794813 22795471 -6209185 + DMRT1B LINE R1 4382 5042 -141 1 758 2121 174 64 15 chrUextra 22795571 22796229 -6208427 + SAR_DM Satellite Satellite 1 689 -203 1 758 3626 57 70 4 chrUextra 22796329 22796987 -6207669 + PROTOP_A DNA P 534 1099 -6 1 758 2086 229 27 18 chrUextra 22797087 22797745 -6206911 + G_DM LINE Jockey 847 1497 -545 1 758 1900 0 17 13 chrUextra 22797845 22798080 -6206576 - NTS_DM Other Other -4 236 1 1 758 1870 17 17 13 chrUextra 22798080 22798319 -6206337 - NTS_DM Other Other 0 240 1 1 758 1269 22 22 22 chrUextra 22798319 22798503 -6206153 - NTS_DM Other Other 0 240 57 1 758 949 60 3 20 chrUextra 22798615 22799203 -6205453 + RSP Satellite Satellite 1 578 0 1 758 34 24 0 0 chrUextra 22799884 22799925 -6204731 + AT_rich Low_complexity Low_complexity 1 41 0 1 758 5686 14 8 0 chrUextra 22800119 22800777 -6203879 + DOC2_DM LINE Jockey 2572 3234 -1559 1 758 1835 17 17 17 chrUextra 22800895 22801135 -6203521 + NTS_DM Other Other 1 240 0 1 758 1835 17 17 17 chrUextra 22801135 22801375 -6203281 + NTS_DM Other Other 1 240 0 1 758 1342 12 6 0 chrUextra 22801375 22801535 -6203121 + NTS_DM Other Other 1 161 -79 1 758 2721 191 6 22 chrUextra 22801636 22802284 -6202372 + SAR_DM Satellite Satellite 481 1118 -354 1 758 293 172 16 0 chrUextra 22802229 22802293 -6202363 - XDMR Unknown Unknown 0 361 297 1 758 1878 9 0 18 chrUextra 22802419 22802638 -6202018 - ACCORD2_LTR LTR Gypsy 0 215 1 1 758 3618 16 14 5 chrUextra 22802638 22803051 -6201605 - R1_DM LINE R1 -2931 2425 2009 1 758 1881 0 17 13 chrUextra 22803154 22803387 -6201269 - NTS_DM Other Other -6 234 1 1 758 1930 4 17 13 chrUextra 22803387 22803626 -6201030 - NTS_DM Other Other 0 240 1 1 758 1349 11 22 16 chrUextra 22803626 22803809 -6200847 - NTS_DM Other Other 0 240 57 1 758 2559 186 47 46 chrUextra 22803909 22804567 -6200089 - DM412 LTR Gypsy -977 5920 5262 1 758 5606 14 5 1 chrUextra 22804667 22805325 -6199331 + ROO_I LTR Pao 3511 4170 -4086 1 758 5897 5 1 0 chrUextra 22805426 22806083 -6198573 + FW_DM LINE Jockey 1872 2529 -2163 1 94 3053 175 11 9 chrUextra 22806184 22806835 -6197821 + SAR_DM Satellite Satellite 425 1076 -396 1 759 5994 0 0 1 chrUextra 22806941 22807599 -6197057 + SSU-rRNA_Dme rRNA rRNA 402 1058 -937 1 759 5899 0 3 3 chrUextra 22807699 22808357 -6196299 + SSU-rRNA_Dme rRNA rRNA 815 1472 -523 1 759 5874 3 0 1 chrUextra 22809215 22809873 -6194783 + R1_DM LINE R1 2366 3022 -2334 1 759 231 299 25 46 chrUextra 22810290 22810486 -6194170 - Gypsy5_I LTR Gypsy -1620 4889 4698 1 759 3207 165 11 9 chrUextra 22810736 22811389 -6193267 - SAR_DM Satellite Satellite -478 994 341 1 759 3610 36 123 0 chrUextra 22812249 22812720 -6191936 + DMRT1A LINE R1 2807 3335 -1848 1 759 1585 36 10 0 chrUextra 22812712 22812905 -6191751 + DMRT1A LINE R1 4451 4645 -538 1 759 202 265 0 0 chrUextra 22813787 22813836 -6190820 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 759 2218 12 1 0 chrUextra 22814521 22814916 -6189740 + MDG3_I LTR Gypsy 4558 4986 0 1 759 1916 36 4 53 chrUextra 22814916 22815179 -6189477 + MDG3_LTR LTR Gypsy 1 250 -17 1 759 1355 6 0 18 chrUextra 22815288 22815453 -6189203 - NTS_DM Other Other -78 162 1 1 759 1203 0 24 18 chrUextra 22815453 22815617 -6189039 - NTS_DM Other Other 0 240 76 1 759 2604 13 0 0 chrUextra 22815627 22815931 -6188725 - G6_DM LINE Jockey 0 2042 1739 1 759 5434 0 2 2 chrUextra 22816037 22816634 -6188022 + LSU-rRNA_Dme rRNA rRNA 3304 3900 0 1 759 26 0 0 0 chrUextra 22816843 22816869 -6187787 + AT_rich Low_complexity Low_complexity 1 26 0 1 759 4453 10 0 0 chrUextra 22816869 22817376 -6187280 - DM176_LTR LTR Gypsy 0 507 1 1 759 708 0 0 0 chrUextra 22817376 22817453 -6187203 - DM176_I LTR Gypsy 0 6420 6344 1 759 2686 174 19 27 chrUextra 22817554 22818186 -6186470 - SAR_DM Satellite Satellite -666 806 180 1 759 677 167 0 15 chrUextra 22818077 22818211 -6186445 + ARS406_DM Unknown Unknown 1 132 -221 1 759 5679 9 0 5 chrUextra 22818311 22818969 -6185687 + IDEFIX_I LTR Gypsy 2379 3033 -2595 1 759 2499 178 110 38 chrUextra 22819072 22819727 -6184929 + TAHRE LINE telomeric 7071 7772 -2691 1 759 2928 186 17 8 chrUextra 22819827 22820484 -6184172 - SAR_DM Satellite Satellite -643 829 167 1 759 2941 177 17 12 chrUextra 22820587 22821239 -6183417 - SAR_DM Satellite Satellite -572 900 246 1 759 3953 92 0 29 chrUextra 22822101 22822660 -6181996 + Gypsy12_I LTR Gypsy 3332 3874 -1672 1 759 578 168 10 0 chrUextra 22822658 22822759 -6181897 + Gypsy12_I LTR Gypsy 4206 4307 -1239 1 759 699 0 0 0 chrUextra 22822860 22822938 -6181718 - NTS_DM Other Other -125 115 38 1 759 877 9 0 35 chrUextra 22822938 22823051 -6181605 - NTS_DM Other Other -107 133 25 1 759 1304 18 0 6 chrUextra 22823103 22823268 -6181388 - NTS_DM Other Other -39 201 38 1 759 907 9 0 27 chrUextra 22823268 22823380 -6181276 - NTS_DM Other Other -107 133 25 1 759 545 36 0 12 chrUextra 22823433 22823517 -6181139 - NTS_DM Other Other -39 201 119 1 759 525 46 0 0 chrUextra 22823620 22823685 -6180971 - S2_DM DNA Tc1 -1670 65 1 1 759 349 161 10 147 chrUextra 22823689 22823791 -6180865 + DNAREP1_DM LINE Penelope 501 588 -6 1 759 266 253 90 50 chrUextra 22824030 22824130 -6180526 - DNAREP1_DM LINE Penelope -2 592 489 1 759 21 0 0 0 chrUextra 22824203 22824224 -6180432 + AT_rich Low_complexity Low_complexity 1 21 0 1 759 5471 9 6 1 chrUextra 22824375 22825033 -6179623 + TART LINE telomeric 9292 9952 -4525 1 759 5992 1 0 1 chrUextra 22825133 22825791 -6178865 - LSU-rRNA_Dme rRNA rRNA -470 3430 2774 1 759 921 203 39 34 chrUextra 22825896 22826157 -6178499 - TAHRE LINE telomeric -4317 10160 9659 1 759 2047 73 0 4 chrUextra 22826649 22826909 -6177747 + Gypsy12_I LTR Gypsy 5288 5546 0 1 759 1896 178 23 28 chrUextra 22826908 22827307 -6177349 + Gypsy12_LTR LTR Gypsy 1 397 -1939 1 759 959 62 0 7 chrUextra 22827409 22827554 -6177102 + (CAAGA)n Simple_repeat Simple_repeat 4 147 0 1 759 1611 12 0 25 chrUextra 22827555 22828010 -6176646 + (CACGA)n Simple_repeat Simple_repeat 1 443 0 1 759 203 0 0 36 chrUextra 22828023 22828051 -6176605 + (CACAA)n Simple_repeat Simple_repeat 5 31 0 1 759 5867 12 0 0 chrUextra 22828165 22828823 -6175833 + Gypsy4_I LTR Gypsy 899 1556 -4732 1 759 2285 172 11 8 chrUextra 22828923 22829581 -6175075 - SAR_DM Satellite Satellite -706 660 1 1 759 4989 48 8 2 chrUextra 22829692 22830324 -6174332 + TART LINE telomeric 2045 2680 -11797 1 759 3111 171 12 8 chrUextra 22830439 22831095 -6173561 + SAR_DM Satellite Satellite 326 984 -488 1 759 3181 173 8 8 chrUextra 22831198 22831850 -6172806 + SAR_DM Satellite Satellite 252 903 -569 1 759 3281 8 0 0 chrUextra 22831952 22832331 -6172325 - QUASIMODO_LTR LTR Gypsy -279 379 1 1 759 2209 11 11 0 chrUextra 22832331 22832609 -6172047 - QUASIMODO_I LTR Gypsy 0 6060 5780 1 759 1293 86 5 31 chrUextra 22832713 22833366 -6171290 + (CTATT)n Simple_repeat Simple_repeat 1 635 0 1 759 5592 23 1 1 chrUextra 22833466 22834123 -6170533 - R1_DM LINE R1 -1030 4326 3670 1 759 2924 15 0 0 chrUextra 22834223 22834554 -6170102 - PROTOP_A DNA P -774 331 1 1 759 1853 52 18 34 chrUextra 22834554 22834880 -6169776 + PROTOP DNA P 3894 4107 -373 1 759 5443 35 0 12 chrUextra 22834980 22835637 -6169019 + BATUMI_I LTR Pao 5534 6182 -1781 1 759 1598 33 0 99 chrUextra 22836036 22836269 -6168387 + DIVER2_I LTR Pao 1366 1575 -2572 1 759 1059 75 20 7 chrUextra 22836246 22836394 -6168262 + DIVER2_I LTR Pao 3719 3868 -279 1 759 3493 269 55 24 chrUextra 22836498 22837884 -6166772 - SAR_DM Satellite Satellite -208 1429 1 1 759 659 137 0 8 chrUextra 22837790 22837908 -6166748 + ARS406_DM Unknown Unknown 1 117 -236 1 759 582 52 26 0 chrUextra 22838008 22838085 -6166571 - DM176_I LTR Gypsy -6341 79 1 1 759 4470 8 0 0 chrUextra 22838085 22838592 -6166064 - DM176_LTR LTR Gypsy 0 507 1 1 759 396 143 0 0 chrUextra 22838593 22838663 -6165993 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 759 47 0 0 0 chrUextra 22838827 22838874 -6165782 + AT_rich Low_complexity Low_complexity 1 47 0 1 759 3131 169 9 12 chrUextra 22839525 22840179 -6164477 - SAR_DM Satellite Satellite -411 1061 410 1 759 285 198 0 0 chrUextra 22840283 22840369 -6164287 + (AATAG)n Simple_repeat Simple_repeat 4 89 0 1 759 480 101 10 10 chrUextra 22840400 22840500 -6164156 - G2_DM LINE Jockey -3 3099 3000 1 759 3347 42 12 5 chrUextra 22840496 22840928 -6163728 - G2_DM LINE Jockey -211 2891 2457 1 759 28 48 0 0 chrUextra 22841156 22841198 -6163458 + AT_rich Low_complexity Low_complexity 1 42 0 1 759 32 0 0 0 chrUextra 22841526 22841558 -6163098 + AT_rich Low_complexity Low_complexity 1 32 0 1 759 5185 3 0 17 chrUextra 22841793 22842450 -6162206 + DM412 LTR Gypsy 1023 1668 -5229 1 759 3755 58 43 0 chrUextra 22842622 22843207 -6161449 - PROTOP_A DNA P 0 1105 570 1 759 1335 7 0 0 chrUextra 22843815 22843964 -6160692 - SSU-rRNA_Dme rRNA rRNA 0 1995 1847 1 759 2861 197 11 19 chrUextra 22844064 22844712 -6159944 - SAR_DM Satellite Satellite -673 642 1 1 759 2332 8 0 0 chrUextra 22844825 22845081 -6159575 - LSU-rRNA_Dme rRNA rRNA -1067 2833 2578 1 759 3634 2 0 0 chrUextra 22845078 22845478 -6159178 - R2_DM LINE R2 0 3607 3208 1 759 242 103 25 25 chrUextra 22845596 22845636 -6159020 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 237 175 0 0 chrUextra 22845688 22845728 -6158928 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 251 186 0 0 chrUextra 22845777 22845820 -6158836 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 1 759 2966 0 0 0 chrUextra 22845900 22846235 -6158421 - G_DM LINE Jockey -3 4343 4009 1 759 454 0 0 0 chrUextra 22846335 22846385 -6158271 + Invader6_I LTR Gypsy 3953 4002 -97 1 759 782 0 0 11 chrUextra 22846425 22846516 -6158140 + Invader6_I LTR Gypsy 4010 4099 0 1 759 3505 18 0 0 chrUextra 22846516 22846909 -6157747 + Invader6_LTR LTR Gypsy 1 393 0 1 759 762 0 0 0 chrUextra 22846909 22846992 -6157664 + Invader6_I LTR Gypsy 1 83 -4016 1 759 5508 36 0 0 chrUextra 22847092 22847749 -6156907 - MDG1_I LTR Gypsy -1823 4773 4117 1 759 4383 10 0 2 chrUextra 22847849 22848341 -6156315 - Copia2_I LTR Copia -146 4016 3526 1 759 1649 261 64 18 chrUextra 22848642 22849263 -6155393 - TV1I LTR Gypsy -2351 3612 2963 1 759 2748 13 0 0 chrUextra 22849363 22849672 -6154984 + BATUMI_I LTR Pao 6112 6420 -1543 1 759 2540 16 3 19 chrUextra 22849698 22850012 -6154644 - BATUMI_I LTR Pao -962 7001 6693 1 759 5483 21 8 8 chrUextra 22850120 22850777 -6153879 + FW_DM LINE Jockey 3946 4602 -90 1 759 5666 1 1 1 chrUextra 22850884 22851534 -6153122 + QUASIMODO_I LTR Gypsy 1589 2238 -3822 1 759 5739 8 1 5 chrUextra 22851634 22852291 -6152365 + G_DM LINE Jockey 1455 2109 -2237 1 759 2592 191 5 9 chrUextra 22852391 22852972 -6151684 - SAR_DM Satellite Satellite -398 1074 496 1 759 581 28 0 0 chrUextra 22852977 22853048 -6151608 + ARS406_DM Unknown Unknown 90 160 -193 1 759 1744 22 17 17 chrUextra 22853148 22853380 -6151276 - NTS_DM Other Other -8 232 1 1 759 1794 25 17 17 chrUextra 22853380 22853620 -6151036 - NTS_DM Other Other 0 240 1 1 759 1264 22 22 22 chrUextra 22853620 22853805 -6150851 - NTS_DM Other Other 0 240 56 1 759 27 29 0 0 chrUextra 22854214 22854248 -6150408 + AT_rich Low_complexity Low_complexity 1 34 0 1 759 261 33 0 0 chrUextra 22854487 22854517 -6150139 + Baggins1 LINE LOA 4727 4756 -697 1 759 230 83 0 0 chrUextra 22854525 22854561 -6150095 + FB4_DM DNA Tc1 3908 3943 -146 1 759 4897 49 11 5 chrUextra 22854662 22855317 -6149339 - R1_DM LINE R1 -981 4375 3789 1 759 2566 78 11 55 chrUextra 22855419 22856054 -6148602 - DMSAT6 Satellite Satellite -32 606 1 1 759 2878 168 16 11 chrUextra 22856176 22856789 -6147867 - SAR_DM Satellite Satellite -458 1014 399 1 759 745 252 89 28 chrUextra 22856507 22856833 -6147823 + XDMR_DM Unknown Unknown 6 351 -9 1 759 305 176 0 26 chrUextra 22856933 22857009 -6147647 + XDMR_DM Unknown Unknown 278 351 -9 1 759 2771 182 11 20 chrUextra 22856951 22857590 -6147066 - SAR_DM Satellite Satellite -371 1101 469 1 759 5882 1 0 0 chrUextra 22857690 22858347 -6146309 - ROO_I LTR Pao -3596 4660 4004 1 759 1723 165 17 8 chrUextra 22858447 22859094 -6145562 + SAR_DM Satellite Satellite 1 652 -500 1 759 2973 171 9 9 chrUextra 22859205 22859841 -6144815 - SAR_DM Satellite Satellite -645 827 192 1 759 700 104 9 9 chrUextra 22859745 22859861 -6144795 + ARS406_DM Unknown Unknown 1 116 -237 1 759 3011 166 11 12 chrUextra 22859961 22860601 -6144055 + SAR_DM Satellite Satellite 438 1076 -396 1 759 2565 152 10 4 chrUextra 22860722 22861203 -6143453 - SAR_DM Satellite Satellite -620 852 369 1 759 1016 87 0 0 chrUextra 22861225 22861375 -6143281 + ARS406_DM Unknown Unknown 1 150 -203 1 759 5316 40 9 6 chrUextra 22861475 22862132 -6142524 - R1_DM LINE R1 -2448 2908 2250 1 759 5824 8 1 0 chrUextra 22862232 22862889 -6141767 - R1_DM LINE R1 -144 5212 4555 1 759 2980 234 29 16 chrUextra 22862989 22864366 -6140290 + SAR_DM Satellite Satellite 1 1394 -549 1 759 2727 9 3 0 chrUextra 22864503 22864838 -6139818 - Gypsy4_I LTR Gypsy -5952 336 1 1 759 2550 17 0 0 chrUextra 22864838 22865125 -6139531 - Gypsy4_LTR LTR Gypsy 0 287 1 1 759 2897 183 6 23 chrUextra 22865260 22865914 -6138742 + SAR_DM Satellite Satellite 448 1090 -382 1 759 2900 176 14 14 chrUextra 22866018 22866663 -6137993 + SAR_DM Satellite Satellite 432 1076 -396 1 759 399 286 35 35 chrUextra 22866813 22866999 -6137657 + Gypsy3_I LTR Gypsy 1324 1546 -4631 1 759 2408 133 8 12 chrUextra 22867531 22868188 -6136468 - BATUMI_I LTR Pao -3112 4802 4101 1 759 4945 25 6 40 chrUextra 22868289 22868945 -6135711 + DOC2_DM LINE Jockey 783 1416 -3377 1 759 1965 17 30 0 chrUextra 22869045 22869282 -6135374 + R1_DM LINE R1 4823 5066 -290 1 759 961 44 0 0 chrUextra 22869279 22869393 -6135263 + R1_DM LINE R1 5243 5356 0 1 759 2040 72 7 0 chrUextra 22869426 22869702 -6134954 + R1_DM LINE R1 1 278 -5078 1 759 3116 171 14 9 chrUextra 22869802 22870459 -6134197 - SAR_DM Satellite Satellite -459 1013 354 1 759 1260 0 0 7 chrUextra 22870559 22870709 -6133947 - ROVER-LTR_DM LTR Gypsy -218 149 1 1 759 4192 10 2 0 chrUextra 22870709 22871216 -6133440 - ROVER-I_DM LTR Gypsy 0 6584 6077 1 759 518 118 0 0 chrUextra 22871319 22871404 -6133252 - ARS406_DM Unknown Unknown -255 98 14 1 759 2843 161 11 9 chrUextra 22871403 22871972 -6132684 + SAR_DM Satellite Satellite 371 940 -532 1 759 5659 24 1 0 chrUextra 22872073 22872730 -6131926 - NINJA_I LTR Pao -4203 1808 1151 1 759 2540 243 3 3 chrUextra 22872844 22873480 -6131176 - DM412 LTR Gypsy -497 6400 5765 1 759 5507 34 9 0 chrUextra 22873587 22874244 -6130412 - R1_DM LINE R1 -1963 3393 2731 1 759 508 122 100 0 chrUextra 22874650 22874740 -6129916 + DNAREP1_DM LINE Penelope 496 594 0 1 759 33 25 0 0 chrUextra 22874802 22874842 -6129814 + AT_rich Low_complexity Low_complexity 1 40 0 1 759 3231 163 14 8 chrUextra 22875107 22875758 -6128898 + SAR_DM Satellite Satellite 371 1025 -447 1 759 575 327 51 73 chrUextra 22875862 22876506 -6128150 + TIRANT_I LTR Gypsy 4508 5137 -2555 1 759 3051 179 21 9 chrUextra 22876615 22877270 -6127386 - SAR_DM Satellite Satellite -470 1002 340 1 759 3177 167 11 9 chrUextra 22877376 22878024 -6126632 + SAR_DM Satellite Satellite 399 1047 -425 1 759 918 194 25 3 chrUextra 22878137 22878498 -6126158 + SAR_DM Satellite Satellite 1 368 -558 1 759 1318 152 38 4 chrUextra 22878521 22878786 -6125870 + SAR_DM Satellite Satellite 373 646 -826 1 759 239 156 0 0 chrUextra 22878886 22878931 -6125725 - ARS406_DM Unknown Unknown -308 45 1 1 759 2983 181 6 6 chrUextra 22878891 22879525 -6125131 + SAR_DM Satellite Satellite 246 879 -593 1 759 635 49 0 0 chrUextra 22879461 22879543 -6125113 - ARS406_DM Unknown Unknown -164 189 108 1 759 5443 3 0 3 chrUextra 22879643 22880300 -6124356 + ROO_I LTR Pao 453 1107 -7149 1 759 3118 178 9 8 chrUextra 22880400 22881057 -6123599 - SAR_DM Satellite Satellite -444 1028 371 1 759 1455 31 0 0 chrUextra 22881157 22881479 -6123177 + (CATCT)n Simple_repeat Simple_repeat 1 322 0 1 759 1323 50 0 0 chrUextra 22881494 22881674 -6122982 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 759 777 97 0 0 chrUextra 22881674 22881808 -6122848 + (CATCG)n Simple_repeat Simple_repeat 1 134 0 1 759 3106 48 73 0 chrUextra 22881914 22882571 -6122085 - PROTOP DNA P -264 841 270 1 759 5636 3 0 0 chrUextra 22882671 22883328 -6121328 + IDEFIX_I LTR Gypsy 4078 4734 -894 1 759 3732 77 9 26 chrUextra 22883448 22884085 -6120571 + DOC2_DM LINE Jockey 6 711 -4082 1 759 5131 5 16 2 chrUextra 22884185 22884544 -6120112 + QUASIMODO_I LTR Gypsy 3365 3723 -2337 1 759 243 0 0 0 chrUextra 22884544 22884571 -6120085 + (CCTAA)n Simple_repeat Simple_repeat 2 28 0 1 759 5131 5 16 2 chrUextra 22884571 22884842 -6119814 + QUASIMODO_I LTR Gypsy 3724 4002 -2058 1 759 2671 194 8 21 chrUextra 22884942 22885595 -6119061 - SAR_DM Satellite Satellite -1073 645 1 1 759 3818 50 44 0 chrUextra 22885699 22886219 -6118437 + PROTOP_A DNA P 573 1105 0 1 759 3223 163 14 11 chrUextra 22886456 22887113 -6117543 + SAR_DM Satellite Satellite 384 1042 -430 1 759 1922 4 17 13 chrUextra 22887220 22887459 -6117197 - NTS_DM Other Other 0 240 1 1 759 1870 17 17 13 chrUextra 22887459 22887698 -6116958 - NTS_DM Other Other 0 240 1 1 759 1153 24 23 23 chrUextra 22887698 22887870 -6116786 - NTS_DM Other Other 0 240 69 1 759 5838 1 1 0 chrUextra 22887970 22888627 -6116029 + ROO_I LTR Pao 1043 1700 -6556 1 759 2028 170 9 13 chrUextra 22889485 22889939 -6114717 + SAR_DM Satellite Satellite 507 958 -514 1 759 1279 41 5 45 chrUextra 22889939 22890141 -6114515 + BATUMI_I LTR Pao 7000 7193 -770 1 759 5331 20 11 8 chrUextra 22890241 22890898 -6113758 + FW_DM LINE Jockey 2147 2805 -1887 1 759 5449 1 1 1 chrUextra 22890999 22891655 -6113001 + ROO_I LTR Pao 3240 3895 -4361 1 759 5430 6 1 0 chrUextra 22891755 22892412 -6112244 - DMRT1A LINE R1 -4025 1158 501 1 759 5475 20 0 0 chrUextra 22892512 22893169 -6111487 - R1_DM LINE R1 -1667 3689 3033 1 759 2532 100 22 11 chrUextra 22893279 22893926 -6110730 + DMSAT6 Satellite Satellite 1 653 -3 1 759 5372 3 18 1 chrUextra 22894026 22894683 -6109973 + HMSBEAGLE_I LTR Gypsy 22 689 -5840 1 759 2371 175 28 27 chrUextra 22894791 22895440 -6109216 - SAR_DM Satellite Satellite -1056 649 1 1 759 3152 146 24 17 chrUextra 22895540 22896197 -6108459 - SAR_DM Satellite Satellite -418 1054 393 1 759 5326 32 1 0 chrUextra 22896297 22896954 -6107702 - MAX_I LTR Pao -2901 5013 4356 1 759 246 150 0 0 chrUextra 22897144 22897184 -6107472 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 246 150 0 0 chrUextra 22897236 22897276 -6107380 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 21 36 0 0 chrUextra 22897289 22897317 -6107339 + AT_rich Low_complexity Low_complexity 1 28 0 1 759 255 125 0 0 chrUextra 22897319 22897359 -6107297 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 22 56 0 0 chrUextra 22897372 22897408 -6107248 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 870 9 0 27 chrUextra 22897434 22897546 -6107110 + NTS_DM Other Other 25 133 -107 1 759 1252 18 0 6 chrUextra 22897546 22897711 -6106945 + NTS_DM Other Other 38 201 -39 1 759 4052 0 6 4 chrUextra 22897811 22898294 -6106362 + LSU-rRNA_Dme rRNA rRNA 1305 1788 -2112 1 759 1121 8 0 0 chrUextra 22898338 22898468 -6106188 + LSU-rRNA_Dme rRNA rRNA 1788 1917 -1983 1 759 246 150 0 0 chrUextra 22898650 22898690 -6105966 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 759 22 56 0 0 chrUextra 22898695 22898731 -6105925 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 3648 0 2 2 chrUextra 22898803 22899225 -6105431 - LSU-rRNA_Dme rRNA rRNA 0 3900 3479 1 759 907 233 77 29 chrUextra 22899326 22899741 -6104915 - Gypsy12_LTR LTR Gypsy -446 1890 1456 1 759 662 228 31 31 chrUextra 22899751 22899973 -6104683 - Gypsy12_LTR LTR Gypsy -1081 1255 1034 1 759 2420 93 15 17 chrUextra 22900082 22900739 -6103917 + DMSAT6 Satellite Satellite 1 656 -105 1 759 5268 11 0 5 chrUextra 22900839 22901483 -6103173 - BATUMI_I LTR Pao -20 7943 7303 1 759 378 121 0 0 chrUextra 22901596 22901654 -6103002 - HETRP_DM Satellite Satellite -286 1586 1529 1 759 452 248 0 16 chrUextra 22901802 22901925 -6102731 - HETRP_DM Satellite Satellite -203 1669 1549 1 759 447 35 0 0 chrUextra 22901925 22901982 -6102674 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 759 665 182 7 7 chrUextra 22902113 22902251 -6102405 - HETRP_DM Satellite Satellite -203 1669 1532 1 759 825 30 0 0 chrUextra 22902355 22902454 -6102202 + PROTOP_A DNA P 1007 1105 0 1 759 26 30 0 0 chrUextra 22902829 22902862 -6101794 + AT_rich Low_complexity Low_complexity 1 33 0 1 759 1020 46 13 19 chrUextra 22903867 22904021 -6100635 - BATUMI_I LTR Pao -1230 6733 6581 1 759 2732 69 161 2 chrUextra 22904071 22904524 -6100132 + BATUMI_I LTR Pao 7303 7827 -136 1 759 1800 174 5 5 chrUextra 22904624 22905281 -6099375 + SAR_DM Satellite Satellite 1 657 -558 1 759 617 0 0 13 chrUextra 22905381 22905457 -6099199 - NTS_DM Other Other -128 112 38 1 759 840 9 0 35 chrUextra 22905457 22905570 -6099086 - NTS_DM Other Other -107 133 25 1 759 1252 18 0 6 chrUextra 22905622 22905787 -6098869 - NTS_DM Other Other -39 201 38 1 759 870 9 0 27 chrUextra 22905787 22905899 -6098757 - NTS_DM Other Other -107 133 25 1 759 553 35 0 11 chrUextra 22905951 22906038 -6098618 - NTS_DM Other Other -39 201 116 1 759 5623 5 0 0 chrUextra 22906138 22906795 -6097861 - DMRT1A LINE R1 -3395 1788 1132 1 759 3365 78 61 13 chrUextra 22906897 22907453 -6097203 + PROTOP_B DNA P 571 1153 0 1 759 2758 169 37 8 chrUextra 22908416 22909061 -6095595 + SAR_DM Satellite Satellite 349 1012 -460 1 759 5384 26 0 0 chrUextra 22909166 22909823 -6094833 - R1_DM LINE R1 -3120 2236 1580 1 759 2628 175 23 21 chrUextra 22909923 22910578 -6094078 + SAR_DM Satellite Satellite 224 879 -593 1 759 2742 176 23 12 chrUextra 22910683 22911337 -6093319 + SAR_DM Satellite Satellite 346 1006 -466 1 759 853 58 0 0 chrUextra 22911437 22911557 -6093099 + ARS406_DM Unknown Unknown 39 158 -195 1 759 2444 163 11 15 chrUextra 22911564 22912094 -6092562 - SAR_DM Satellite Satellite -569 903 376 1 759 5418 15 1 1 chrUextra 22912197 22912851 -6091805 - R1_DM LINE R1 -1461 3895 3242 1 759 3332 20 4 51 chrUextra 22912982 22913451 -6091205 - CIRCE LINE Composite -929 5427 4981 1 759 5521 15 0 0 chrUextra 22913708 22914365 -6090291 - DMRT1B LINE R1 -1535 3648 2992 1 759 5483 15 5 0 chrUextra 22914465 22915122 -6089534 - FW_DM LINE Jockey -401 4291 3632 1 759 5437 6 0 0 chrUextra 22915222 22915879 -6088777 + PROTOP_A DNA P 286 942 -163 1 759 3566 0 2 0 chrUextra 22916229 22916636 -6088020 - SSU-rRNA_Dme rRNA rRNA 0 1995 1588 1 759 5333 12 0 0 chrUextra 22916736 22917393 -6087263 + Invader2_I LTR Gypsy 2912 3568 -1024 1 759 2808 176 14 9 chrUextra 22917493 22918145 -6086511 + SAR_DM Satellite Satellite 422 1076 -396 1 759 2621 84 1 27 chrUextra 22918273 22918683 -6085973 + QUASIMODO_LTR LTR Gypsy 133 658 0 1 759 5532 3 1 0 chrUextra 22919014 22919664 -6084992 + DM176_I LTR Gypsy 4991 5641 -779 1 759 3046 156 12 15 chrUextra 22919765 22920421 -6084235 - SAR_DM Satellite Satellite -439 1033 380 1 759 28 0 0 0 chrUextra 22920590 22920618 -6084038 + AT_rich Low_complexity Low_complexity 1 28 0 1 759 975 112 0 0 chrUextra 22920620 22921052 -6083604 + (TTA)n Simple_repeat Simple_repeat 1 432 0 1 759 5396 23 0 0 chrUextra 22921278 22921935 -6082721 + R1_DM LINE R1 2400 3056 -2300 1 759 5611 3 0 0 chrUextra 22922046 22922692 -6081964 + LSU-rRNA_Dme rRNA rRNA 1788 2433 -1467 1 759 647 0 0 0 chrUextra 22922792 22922866 -6081790 + LSU-rRNA_Dme rRNA rRNA 3827 3900 0 1 759 22 56 0 0 chrUextra 22922938 22922974 -6081682 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 246 150 0 0 chrUextra 22922979 22923019 -6081637 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 246 150 0 0 chrUextra 22923071 22923111 -6081545 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 246 150 0 0 chrUextra 22923164 22923204 -6081452 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 255 125 0 0 chrUextra 22923247 22923287 -6081369 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 22 56 0 0 chrUextra 22923300 22923336 -6081320 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 625 36 0 35 chrUextra 22923362 22923449 -6081207 + NTS_DM Other Other 25 108 -132 1 759 2661 189 9 12 chrUextra 22923552 22924206 -6080450 + SAR_DM Satellite Satellite 195 846 -626 1 759 3768 26 0 16 chrUextra 22925220 22925720 -6078936 + STALKER4_I LTR Gypsy 1064 1555 -4975 1 759 2741 185 6 8 chrUextra 22925820 22926458 -6078198 - SAR_DM Satellite Satellite -641 831 195 1 759 666 107 0 9 chrUextra 22926364 22926477 -6078179 + ARS406_DM Unknown Unknown 1 112 -241 1 759 2753 174 36 9 chrUextra 22926579 22927223 -6077433 + SAR_DM Satellite Satellite 416 1076 -396 1 759 5639 0 0 1 chrUextra 22927334 22927991 -6076665 + R1_DM LINE R1 2712 3367 -1989 1 759 3450 15 0 0 chrUextra 22928091 22928503 -6076153 - PROTOP_A DNA P -693 412 1 1 759 1923 45 0 0 chrUextra 22928503 22928748 -6075908 - DMCR1A LINE CR1 -2825 1645 1401 1 759 2778 181 13 8 chrUextra 22928848 22929484 -6075172 - SAR_DM Satellite Satellite -639 833 195 1 759 673 106 0 9 chrUextra 22929390 22929504 -6075152 + ARS406_DM Unknown Unknown 1 113 -240 1 759 273 305 30 8 chrUextra 22929609 22929741 -6074915 - Invader4_I LTR Gypsy -2278 135 1 1 759 4825 16 20 21 chrUextra 22930360 22931016 -6073640 + ROO_I LTR Pao 303 957 -7299 1 759 5362 14 6 0 chrUextra 22931116 22931772 -6072884 - IVK_DM LINE I -3277 2125 1466 1 759 1761 203 118 41 chrUextra 22931876 22932504 -6072152 + HETA LINE telomeric 5048 5723 -358 1 759 5359 21 1 3 chrUextra 22932628 22933284 -6071372 + R1_DM LINE R1 3229 3883 -1473 1 759 5619 1 0 1 chrUextra 22933384 22934040 -6070616 - R1_DM LINE R1 -1990 3366 2712 1 759 2783 180 9 5 chrUextra 22934142 22934773 -6069883 - SAR_DM Satellite Satellite -593 879 246 1 759 376 111 0 0 chrUextra 22934733 22934796 -6069860 + ARS406_DM Unknown Unknown 1 63 -290 1 759 1757 5 5 0 chrUextra 22934896 22935100 -6069556 - SSU-rRNA_Dme rRNA rRNA -1338 657 453 1 759 1922 122 64 31 chrUextra 22935107 22935529 -6069127 + STALKER4_I LTR Gypsy 564 999 -5531 1 759 2945 170 11 8 chrUextra 22935652 22936304 -6068352 - SAR_DM Satellite Satellite -487 985 332 1 94 2477 181 8 30 chrUextra 22937165 22937802 -6066854 + SAR_DM Satellite Satellite 496 1118 -354 1 760 362 186 10 19 chrUextra 22937716 22937820 -6066836 - XDMR_DM Unknown Unknown 0 360 258 1 760 2815 19 101 0 chrUextra 22937920 22938328 -6066328 - R1_DM LINE R1 -1561 3795 3347 1 760 2022 36 0 0 chrUextra 22938324 22938576 -6066080 - R1_DM LINE R1 -2696 2660 2409 1 760 1152 7 7 0 chrUextra 22938676 22938822 -6065834 - ROO_I LTR Pao -3514 4742 4596 1 760 522 119 0 0 chrUextra 22938822 22938906 -6065750 + (CTG)n Simple_repeat Simple_repeat 1 84 0 1 760 3507 7 18 5 chrUextra 22938906 22939332 -6065324 - ROO_I LTR Pao -7616 640 207 1 760 223 134 67 0 chrUextra 22939432 22939551 -6065105 + (TTATA)n Simple_repeat Simple_repeat 4 130 0 1 760 292 136 68 0 chrUextra 22939554 22939716 -6064940 + T-rich Low_complexity Low_complexity 5 177 0 1 760 1927 5 0 0 chrUextra 22939739 22939963 -6064693 - DIVER_LTR LTR Pao 0 224 1 1 760 1074 8 0 0 chrUextra 22939963 22940088 -6064568 - DIVER_I LTR Pao 0 5643 5519 1 760 4394 78 20 0 chrUextra 22940188 22940844 -6063812 - STALKER4_I LTR Gypsy -275 6255 5587 1 760 2628 173 10 13 chrUextra 22940944 22941560 -6063096 - SAR_DM Satellite Satellite -667 805 192 1 760 881 88 0 7 chrUextra 22941463 22941600 -6063056 + ARS406_DM Unknown Unknown 1 136 -217 1 760 324 105 18 0 chrUextra 22941700 22941757 -6062899 - ARS406_DM Unknown Unknown -295 58 1 1 760 2510 174 8 5 chrUextra 22941717 22942349 -6062307 + SAR_DM Satellite Satellite 1 633 -677 1 760 5587 9 1 0 chrUextra 22942456 22943112 -6061544 + DOC2_DM LINE Jockey 1733 2389 -2404 1 760 1589 53 164 99 chrUextra 22943212 22943565 -6061091 + ROO_I LTR Pao 519 894 -7362 1 760 2479 32 3 0 chrUextra 22943554 22943868 -6060788 + ROO_I LTR Pao 1303 1617 -6639 1 760 669 27 35 35 chrUextra 22943968 22944083 -6060573 + NTS_DM Other Other 126 240 0 1 760 1744 21 17 17 chrUextra 22944083 22944323 -6060333 + NTS_DM Other Other 1 240 0 1 760 1756 17 17 17 chrUextra 22944323 22944563 -6060093 + NTS_DM Other Other 1 240 0 1 760 521 16 0 0 chrUextra 22944563 22944624 -6060032 + NTS_DM Other Other 1 61 -179 1 760 357 328 10 20 chrUextra 22944725 22945034 -6059622 - GTWIN_I LTR Gypsy -3778 2643 2442 1 760 5522 3 0 1 chrUextra 22945480 22946136 -6058520 + ROO_I LTR Pao 3844 4498 -3758 1 760 5694 0 0 1 chrUextra 22946236 22946892 -6057764 + FW_DM LINE Jockey 3410 4064 -628 1 760 1235 317 10 11 chrUextra 22947125 22947648 -6057008 + HMSBEAGLE_I LTR Gypsy 1440 1961 -4568 1 760 2350 206 15 14 chrUextra 22947749 22948404 -6056252 + SAR_DM Satellite Satellite 195 850 -622 1 760 3318 7 5 2 chrUextra 22949260 22949665 -6054991 + DM176_LTR LTR Gypsy 102 507 0 1 760 420 111 0 0 chrUextra 22949669 22949732 -6054924 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1 760 1158 122 0 0 chrUextra 22949731 22949911 -6054745 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 760 909 0 9 0 chrUextra 22950016 22950125 -6054531 - R1_DM LINE R1 -5246 110 1 1 760 4728 2 0 2 chrUextra 22950125 22950672 -6053984 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2087 1 760 1449 115 82 55 chrUextra 22950773 22951188 -6053468 + BATUMI_I LTR Pao 344 769 -7194 1 760 910 71 0 21 chrUextra 22951229 22951373 -6053283 + BATUMI_I LTR Pao 749 889 -7074 1 760 40 37 0 0 chrUextra 22951373 22951427 -6053229 + AT_rich Low_complexity Low_complexity 1 54 0 1 760 2918 33 53 0 chrUextra 22951528 22952184 -6052472 - R1_DM LINE R1 -2195 3161 2471 1 760 3326 236 34 15 chrUextra 22952284 22953694 -6050962 + SAR_DM Satellite Satellite 1 1437 -208 1 760 2606 52 57 3 chrUextra 22953796 22954163 -6050493 + PROTOP_A DNA P 719 1105 0 1 760 2950 178 8 6 chrUextra 22955320 22955964 -6048692 + SAR_DM Satellite Satellite 369 1013 -459 1 760 768 119 0 0 chrUextra 22956064 22956182 -6048474 + (CATA)n Simple_repeat Simple_repeat 3 120 0 1 760 2316 8 0 0 chrUextra 22956184 22956450 -6048206 - DMLTR5 LTR Gypsy 0 266 1 1 760 2319 0 0 0 chrUextra 22956450 22956720 -6047936 - HMSBEAGLE_I LTR Gypsy 0 6529 6260 1 760 441 0 0 0 chrUextra 22957427 22957476 -6047180 + (TTGTG)n Simple_repeat Simple_repeat 3 51 0 1 760 5525 14 17 0 chrUextra 22958332 22958988 -6045668 - Invader1_I LTR Gypsy -1837 1349 683 1 760 4108 71 6 7 chrUextra 22959089 22959744 -6044912 + G2_DM LINE Jockey 4 509 -2593 1 760 2450 60 6 3 chrUextra 22959844 22960179 -6044477 - R1_DM LINE R1 -5020 336 1 1 760 2319 28 0 7 chrUextra 22960212 22960499 -6044157 - R1_DM LINE R1 0 5356 5072 1 760 5633 3 0 0 chrUextra 22960600 22961256 -6043400 + DMRT1B LINE R1 4216 4871 -312 1 760 2437 94 31 9 chrUextra 22961356 22962010 -6042646 + DMSAT6 Satellite Satellite 1 668 -40 1 760 5527 0 0 0 chrUextra 22962871 22963524 -6041132 + LSU-rRNA_Dme rRNA rRNA 366 1018 -2882 1 760 32 0 0 0 chrUextra 22963714 22963746 -6040910 + AT_rich Low_complexity Low_complexity 1 32 0 1 760 3524 2 0 0 chrUextra 22963878 22964280 -6040376 + SSU-rRNA_Dme rRNA rRNA 1 402 -1593 1 760 4846 47 17 1 chrUextra 22964380 22965036 -6039620 - R1_DM LINE R1 -4102 1254 589 1 760 2684 185 9 8 chrUextra 22965136 22965774 -6038882 + SAR_DM Satellite Satellite 438 1076 -396 1 760 262 106 0 21 chrUextra 22966172 22966220 -6038436 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 760 351 49 65 16 chrUextra 22966242 22966304 -6038352 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 760 722 186 0 7 chrUextra 22966303 22966449 -6038207 - DMLTR5 LTR Gypsy 0 266 122 1 760 456 0 17 0 chrUextra 22966648 22966707 -6037949 + NOMAD_I LTR Gypsy 6513 6572 0 1 760 4456 6 0 0 chrUextra 22966707 22967225 -6037431 + NOMAD_LTR LTR Gypsy 1 518 0 1 760 501 83 0 0 chrUextra 22967232 22967304 -6037352 - PROTOP_A DNA P -857 248 177 1 760 3277 38 12 0 chrUextra 22967404 22967825 -6036831 - DIVER2_I LTR Pao -3 4144 3719 1 760 1485 38 0 99 chrUextra 22967802 22968035 -6036621 - DIVER2_I LTR Pao -2572 1575 1366 1 760 1673 0 5 0 chrUextra 22968161 22968355 -6036301 + LSU-rRNA_Dme rRNA rRNA 3706 3900 0 1 760 22 56 0 0 chrUextra 22968427 22968463 -6036193 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 246 150 0 0 chrUextra 22968468 22968508 -6036148 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 246 150 0 0 chrUextra 22968560 22968600 -6036056 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 246 150 0 0 chrUextra 22968652 22968692 -6035964 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 255 125 0 0 chrUextra 22968735 22968775 -6035881 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 5480 14 1 0 chrUextra 22968916 22969572 -6035084 - Gypsy4_I LTR Gypsy -1670 4618 3962 1 760 2952 166 17 9 chrUextra 22969678 22970327 -6034329 + SAR_DM Satellite Satellite 326 979 -493 1 760 5644 1 0 0 chrUextra 22970428 22971084 -6033572 - FW_DM LINE Jockey -157 4535 3880 1 760 2824 170 14 11 chrUextra 22971185 22971816 -6032840 - SAR_DM Satellite Satellite -645 827 195 1 760 677 120 0 0 chrUextra 22971723 22971840 -6032816 + ARS406_DM Unknown Unknown 1 117 -236 1 760 2789 179 11 8 chrUextra 22971940 22972586 -6032070 + SAR_DM Satellite Satellite 256 903 -569 1 760 419 34 51 0 chrUextra 22972696 22972755 -6031901 + (TTCTC)n Simple_repeat Simple_repeat 1 62 0 1 760 2361 113 20 14 chrUextra 22974208 22974864 -6029792 - DMSAT6 Satellite Satellite -5 660 1 1 760 3158 157 9 9 chrUextra 22974964 22975620 -6029036 + SAR_DM Satellite Satellite 376 1031 -441 1 760 2481 100 9 17 chrUextra 22975734 22976375 -6028281 - DMSAT6 Satellite Satellite 0 636 1 1 760 5132 28 0 0 chrUextra 22977233 22977888 -6026768 - ACCORD2_I LTR Gypsy -400 6812 6158 1 760 220 141 46 15 chrUextra 22978092 22978157 -6026499 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 760 3288 3 0 0 chrUextra 22978744 22979124 -6025532 - FW_DM LINE Jockey -4312 380 1 1 760 1285 174 4 0 chrUextra 22979131 22979390 -6025266 + SAR_DM Satellite Satellite 632 891 -581 1 760 642 35 12 0 chrUextra 22979314 22979400 -6025256 - ARS406_DM Unknown Unknown -164 189 103 1 760 2612 197 9 9 chrUextra 22979504 22980156 -6024500 + SAR_DM Satellite Satellite 192 843 -629 1 760 891 100 12 24 chrUextra 22980258 22980912 -6023744 + RSP Satellite Satellite 1 646 0 1 760 746 25 32 32 chrUextra 22981012 22981136 -6023520 + NTS_DM Other Other 117 240 0 1 760 1734 21 17 17 chrUextra 22981136 22981376 -6023280 + NTS_DM Other Other 1 240 0 1 760 1850 4 17 13 chrUextra 22981376 22981615 -6023041 + NTS_DM Other Other 1 240 0 1 760 437 0 19 0 chrUextra 22981615 22981668 -6022988 + NTS_DM Other Other 1 54 -186 1 760 4824 12 0 0 chrUextra 22981856 22982424 -6022232 + Gypsy4_I LTR Gypsy 374 941 -5347 1 760 2559 196 5 20 chrUextra 22982524 22983176 -6021480 + SAR_DM Satellite Satellite 465 1106 -366 1 760 5052 43 8 3 chrUextra 22983280 22983936 -6020720 + R1_DM LINE R1 899 1557 -3799 1 760 846 258 119 58 chrUextra 22984042 22984673 -6019983 + Gypsy12_LTR LTR Gypsy 586 1255 -1081 1 760 2848 176 8 8 chrUextra 22984792 22985433 -6019223 + SAR_DM Satellite Satellite 297 937 -535 1 760 981 65 0 0 chrUextra 22985310 22985448 -6019208 - ARS406_DM Unknown Unknown -164 189 52 1 760 409 0 0 56 chrUextra 22985548 22985602 -6019054 - NTS_DM Other Other -165 75 25 1 760 1252 18 0 6 chrUextra 22985654 22985819 -6018837 - NTS_DM Other Other -39 201 38 1 760 870 9 0 27 chrUextra 22985819 22985931 -6018725 - NTS_DM Other Other -107 133 25 1 760 22 56 0 0 chrUextra 22985957 22985993 -6018663 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 243 125 0 0 chrUextra 22986006 22986046 -6018610 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 246 150 0 0 chrUextra 22986089 22986129 -6018527 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 243 153 68 27 chrUextra 22986349 22986423 -6018233 + XDMR_DM Unknown Unknown 275 351 -9 1 760 2361 195 5 19 chrUextra 22986365 22986960 -6017696 - SAR_DM Satellite Satellite -371 1101 515 1 760 23 68 0 0 chrUextra 22987096 22987140 -6017516 + AT_rich Low_complexity Low_complexity 1 44 0 1 760 26 30 0 0 chrUextra 22987186 22987219 -6017437 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 965 50 0 0 chrUextra 22987597 22987716 -6016940 - PROTOP DNA P 0 4480 4362 1 760 244 259 102 0 chrUextra 22988036 22988144 -6016512 - DMRT1C LINE R1 -4896 547 429 1 760 3013 168 8 9 chrUextra 22988572 22989228 -6015428 - SAR_DM Satellite Satellite -396 1076 422 1 760 5627 5 0 0 chrUextra 22989328 22989984 -6014672 + R1_DM LINE R1 1781 2436 -2920 1 760 2984 23 8 8 chrUextra 22990089 22990477 -6014179 - BATUMI_I LTR Pao -1149 6814 6427 1 760 1785 33 0 4 chrUextra 22990500 22990740 -6013916 + BATUMI_I LTR Pao 7303 7541 -422 1 760 22 56 0 0 chrUextra 22990882 22990918 -6013738 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 870 9 0 27 chrUextra 22990944 22991056 -6013600 + NTS_DM Other Other 25 133 -107 1 760 1252 18 0 6 chrUextra 22991056 22991221 -6013435 + NTS_DM Other Other 38 201 -39 1 760 870 9 0 27 chrUextra 22991273 22991385 -6013271 + NTS_DM Other Other 25 133 -107 1 760 875 18 0 0 chrUextra 22991385 22991496 -6013160 + NTS_DM Other Other 38 148 -92 1 760 1429 166 23 7 chrUextra 22991596 22991905 -6012751 + SAR_DM Satellite Satellite 590 903 -569 1 760 657 53 53 0 chrUextra 22991820 22991915 -6012741 - ARS406_DM Unknown Unknown -164 189 90 1 760 1518 179 6 3 chrUextra 22991920 22992251 -6012405 + SAR_DM Satellite Satellite 496 827 -645 1 760 652 97 0 0 chrUextra 22992368 22992471 -6012185 + TART LINE telomeric 7780 7882 -6595 1 760 1834 169 39 5 chrUextra 22993109 22993764 -6010892 - SAR_DM Satellite Satellite -633 677 1 1 760 3075 160 11 11 chrUextra 22993864 22994520 -6010136 + SAR_DM Satellite Satellite 389 1044 -428 1 760 4851 8 72 0 chrUextra 22994620 22995276 -6009380 + STALKER4_I LTR Gypsy 3489 4191 -2339 1 760 4350 61 88 0 chrUextra 22995376 22996032 -6008624 - DM297_I LTR Gypsy -2291 3876 3163 1 760 411 127 0 0 chrUextra 22996134 22996205 -6008451 - ARS406_DM Unknown Unknown -282 71 1 1 760 2828 190 5 3 chrUextra 22996143 22996788 -6007868 + SAR_DM Satellite Satellite 224 869 -603 1 760 3751 11 139 0 chrUextra 22996888 22997544 -6007112 + QUASIMODO_I LTR Gypsy 398 1144 -4916 1 760 238 288 0 0 chrUextra 22997645 22997725 -6006931 - XDMR_DM Unknown Unknown -271 89 10 1 760 1186 271 40 37 chrUextra 22997654 22998298 -6006358 + SAR_DM Satellite Satellite 246 891 -581 1 760 1039 8 0 0 chrUextra 22998400 22998520 -6006136 - LSU-rRNA_Dme rRNA rRNA -1141 2759 2640 1 760 3798 0 0 0 chrUextra 22998518 22998954 -6005702 - R1_DM LINE R1 0 5356 4921 1 760 900 9 0 0 chrUextra 22998951 22999056 -6005600 - LSU-rRNA_Dme rRNA rRNA -1253 2647 2543 1 760 493 117 0 0 chrUextra 22999912 22999989 -6004667 + SAR_DM Satellite Satellite 600 676 -796 1 760 2314 172 36 20 chrUextra 23000006 23000568 -6004088 + SAR_DM Satellite Satellite 333 903 -569 1 760 263 57 0 0 chrUextra 23000668 23000703 -6003953 - R1_DM LINE R1 -2127 3229 3195 1 760 5095 27 0 0 chrUextra 23000701 23001324 -6003332 - R1_DM LINE R1 -2484 2872 2250 1 760 2782 167 34 14 chrUextra 23001424 23002080 -6002576 + SAR_DM Satellite Satellite 334 1002 -470 1 760 2403 85 12 34 chrUextra 23002180 23002836 -6001820 - DMSAT6 Satellite Satellite -33 641 1 1 760 5155 8 14 5 chrUextra 23002936 23003592 -6001064 + STALKER4_I LTR Gypsy 2729 3390 -3140 1 760 3017 163 9 9 chrUextra 23003698 23004348 -6000308 - SAR_DM Satellite Satellite -424 1048 399 1 760 2976 160 16 11 chrUextra 23004455 23005100 -5999556 - SAR_DM Satellite Satellite -426 1046 399 1 760 963 281 82 39 chrUextra 23005215 23005852 -5998804 + SAR_DM Satellite Satellite 495 1158 -314 1 760 2834 177 9 8 chrUextra 23005964 23006613 -5998043 - SAR_DM Satellite Satellite -577 895 246 1 760 3831 8 126 2 chrUextra 23006716 23007202 -5997454 + R1_DM LINE R1 4811 5356 0 1 760 998 58 7 0 chrUextra 23007235 23007372 -5997284 + R1_DM LINE R1 1 138 -5218 1 760 2686 189 8 8 chrUextra 23007472 23008112 -5996544 - SAR_DM Satellite Satellite -641 831 192 1 760 705 98 0 0 chrUextra 23008016 23008128 -5996528 + ARS406_DM Unknown Unknown 1 112 -241 1 760 2330 11 0 0 chrUextra 23008228 23008509 -5996147 + DOC2_DM LINE Jockey 4513 4793 0 1 760 1216 86 142 26 chrUextra 23008622 23008884 -5995772 + DOC2_DM LINE Jockey 6 257 -4435 1 760 955 9 8 8 chrUextra 23008992 23009110 -5995546 + BATUMI_I LTR Pao 2131 2248 -5715 1 760 4082 34 2 9 chrUextra 23009108 23009640 -5995016 + BATUMI_I LTR Pao 2909 3436 -4527 1 760 5597 3 0 0 chrUextra 23009740 23010396 -5994260 - R1_DM LINE R1 -2175 3181 2526 1 760 2780 176 10 6 chrUextra 23010496 23011120 -5993536 - SAR_DM Satellite Satellite -601 871 246 1 760 418 86 14 0 chrUextra 23011080 23011150 -5993506 + ARS406_DM Unknown Unknown 1 71 -282 1 760 2766 174 14 16 chrUextra 23011264 23011908 -5992748 - SAR_DM Satellite Satellite -396 1076 434 1 760 1403 144 41 79 chrUextra 23012008 23012491 -5992165 - HETA LINE telomeric -5427 654 190 1 760 991 116 0 11 chrUextra 23012490 23012664 -5991992 - TAHRE LINE telomeric -11 10452 10281 1 760 5706 1 0 1 chrUextra 23012764 23013420 -5991236 + DOC LINE Jockey 3642 4296 -429 1 760 4737 44 44 0 chrUextra 23013520 23014176 -5990480 + ZAM_I LTR Gypsy 3013 3697 -3793 1 760 2503 189 10 10 chrUextra 23014306 23014931 -5989725 - SAR_DM Satellite Satellite -396 1076 452 1 760 1620 11 5 0 chrUextra 23015033 23015241 -5989415 + (TCTTG)n Simple_repeat Simple_repeat 1 209 0 1 760 1131 84 0 0 chrUextra 23015241 23015419 -5989237 + (CATGT)n Simple_repeat Simple_repeat 3 180 0 1 760 266 78 39 0 chrUextra 23015419 23015441 -5989215 + (TCTTG)n Simple_repeat Simple_repeat 4 27 0 1 760 1008 99 0 0 chrUextra 23015441 23015688 -5988968 + (CATGT)n Simple_repeat Simple_repeat 1 247 0 1 760 2521 176 20 25 chrUextra 23015788 23016434 -5988222 + SAR_DM Satellite Satellite 477 1119 -353 1 760 365 174 21 11 chrUextra 23016351 23016444 -5988212 - XDMR_DM Unknown Unknown 0 360 267 1 760 5389 18 1 0 chrUextra 23016544 23017200 -5987456 - DMRT1B LINE R1 -2094 3089 2433 1 760 2644 194 17 25 chrUextra 23018056 23018712 -5985944 - SAR_DM Satellite Satellite -667 650 1 1 760 4714 0 2 0 chrUextra 23018812 23019350 -5985306 + SSU-rRNA_Dme rRNA rRNA 1457 1995 0 1 760 21 89 0 0 chrUextra 23019369 23019425 -5985231 + AT_rich Low_complexity Low_complexity 1 56 0 1 760 2914 179 8 6 chrUextra 23019575 23020223 -5984433 - SAR_DM Satellite Satellite -478 994 346 1 760 3517 52 44 0 chrUextra 23020325 23020823 -5983833 + PROTOP_A DNA P 586 1105 0 1 760 2823 70 5 17 chrUextra 23021133 23021539 -5983117 + Baggins1 LINE LOA 4791 5191 -262 1 760 579 53 0 0 chrUextra 23021836 23021911 -5982745 - Gypsy6_LTR LTR Gypsy -163 244 170 1 760 4789 9 2 3 chrUextra 23021927 23022492 -5982164 - SSU-rRNA_Dme rRNA rRNA -170 1825 1262 1 760 5354 8 57 0 chrUextra 23022592 23023246 -5981410 - R2_DM LINE R2 -2404 1203 513 1 760 3002 3 0 24 chrUextra 23023348 23023718 -5980938 + ROVER-LTR_DM LTR Gypsy 7 367 0 1 760 1368 0 0 255 chrUextra 23023718 23024004 -5980652 + ROVER-I_DM LTR Gypsy 1 213 -6371 1 760 5132 32 0 8 chrUextra 23024107 23024760 -5979896 - DOC3_DM LINE Jockey -1259 3481 2834 1 760 4013 29 62 1 chrUextra 23024860 23025516 -5979140 - R1_DM LINE R1 -1741 3615 2920 1 760 285 282 107 89 chrUextra 23025670 23025950 -5978706 - Invader1_LTR LTR Gypsy -55 368 84 1 760 439 162 186 18 chrUextra 23026159 23026272 -5978384 + DMLTR5 LTR Gypsy 44 175 -91 1 760 5603 8 0 0 chrUextra 23026372 23027028 -5977628 - Gypsy4_I LTR Gypsy -4236 2052 1397 1 760 26 30 0 0 chrUextra 23027239 23027272 -5977384 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 953 17 25 0 chrUextra 23027666 23027784 -5976872 + PROTOP_B DNA P 55 175 -978 1 760 4686 19 27 0 chrUextra 23027885 23028473 -5976183 + DMCR1A LINE CR1 3791 4394 -76 1 760 5289 25 0 6 chrUextra 23029396 23030052 -5974604 - FW_DM LINE Jockey -160 4532 3881 1 760 2168 11 0 81 chrUextra 23030155 23030463 -5974193 + DM176_LTR LTR Gypsy 1 283 -224 1 760 2020 20 16 0 chrUextra 23030464 23030717 -5973939 + DM176_LTR LTR Gypsy 251 507 0 1 760 688 67 0 0 chrUextra 23030718 23030808 -5973848 - ZAM_I LTR Gypsy -6989 501 412 1 760 22 88 0 0 chrUextra 23033019 23033076 -5971580 + AT_rich Low_complexity Low_complexity 1 57 0 1 760 22 56 0 0 chrUextra 23033198 23033234 -5971422 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 255 125 0 0 chrUextra 23033247 23033287 -5971369 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 21 36 0 0 chrUextra 23033289 23033317 -5971339 + AT_rich Low_complexity Low_complexity 1 28 0 1 760 246 150 0 0 chrUextra 23033330 23033370 -5971286 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 246 150 0 0 chrUextra 23033422 23033462 -5971194 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 246 150 0 0 chrUextra 23033514 23033554 -5971102 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 22 56 0 0 chrUextra 23033559 23033595 -5971061 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 1444 0 0 0 chrUextra 23033667 23033831 -5970825 - LSU-rRNA_Dme rRNA rRNA 0 3900 3737 1 760 3325 191 0 0 chrUextra 23033931 23034585 -5970071 - ROVER-I_DM LTR Gypsy -2506 4078 3425 1 760 21 89 0 0 chrUextra 23034857 23034913 -5969743 + AT_rich Low_complexity Low_complexity 1 56 0 1 760 3545 0 2 2 chrUextra 23034932 23035341 -5969315 - SSU-rRNA_Dme rRNA rRNA 0 1995 1587 1 760 4199 97 70 8 chrUextra 23035441 23036096 -5968560 + Gypsy12_I LTR Gypsy 1280 1975 -3571 1 760 2117 32 41 28 chrUextra 23036196 23036487 -5968169 - PROTOP_A DNA P -810 295 1 1 760 2309 87 0 25 chrUextra 23036487 23036851 -5967805 - TART LINE telomeric -13268 1209 855 1 760 5594 5 0 0 chrUextra 23036951 23037606 -5967050 + FW_DM LINE Jockey 306 960 -3732 1 760 2900 168 18 11 chrUextra 23037706 23038361 -5966295 + SAR_DM Satellite Satellite 409 1068 -404 1 760 3213 41 41 8 chrUextra 23039225 23039870 -5964786 - PROTOP DNA P -339 766 235 1 760 4530 47 43 9 chrUextra 23039971 23040615 -5964041 - PROTOP DNA P -3767 713 48 1 760 246 150 0 0 chrUextra 23041503 23041543 -5963113 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 255 125 0 0 chrUextra 23041586 23041626 -5963030 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 22 56 0 0 chrUextra 23041639 23041675 -5962981 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 870 9 0 27 chrUextra 23041701 23041813 -5962843 + NTS_DM Other Other 25 133 -107 1 760 1252 18 0 6 chrUextra 23041813 23041978 -5962678 + NTS_DM Other Other 38 201 -39 1 760 751 29 9 28 chrUextra 23042030 23042136 -5962520 + NTS_DM Other Other 25 128 -112 1 760 3128 122 92 21 chrUextra 23042236 23042844 -5961812 + TART LINE telomeric 7150 7726 -6751 1 760 257 64 62 21 chrUextra 23042843 23042891 -5961765 + HETA LINE telomeric 5651 5700 -381 1 760 1847 4 17 13 chrUextra 23043005 23043244 -5961412 - NTS_DM Other Other 0 240 1 1 760 1861 0 17 13 chrUextra 23043244 23043483 -5961173 - NTS_DM Other Other 0 240 1 1 760 1102 0 31 19 chrUextra 23043483 23043645 -5961011 - NTS_DM Other Other 0 240 77 1 760 1534 101 49 56 chrUextra 23043747 23044071 -5960585 + ROVER-LTR_DM LTR Gypsy 46 367 0 1 760 833 171 7 160 chrUextra 23044071 23044378 -5960278 + ROVER-I_DM LTR Gypsy 1 260 -6324 1 760 2608 222 14 12 chrUextra 23044513 23045156 -5959500 + ROVER-I_DM LTR Gypsy 1823 2466 -4118 1 760 5445 17 5 0 chrUextra 23045256 23045911 -5958745 - Copia2_I LTR Copia -1386 2776 2119 1 760 228 152 0 0 chrUextra 23046766 23046812 -5957844 - ARS406_DM Unknown Unknown -307 46 1 1 760 3061 173 5 5 chrUextra 23046772 23047418 -5957238 + SAR_DM Satellite Satellite 246 891 -581 1 760 1940 134 16 9 chrUextra 23047521 23048056 -5956600 - G2_DM LINE Jockey -2868 234 4 1 760 335 44 0 0 chrUextra 23048067 23048112 -5956544 + DOC5_DM LINE Jockey 2765 2809 -1873 1 760 2881 180 6 9 chrUextra 23048277 23048927 -5955729 - SAR_DM Satellite Satellite -426 1046 399 1 760 2943 182 6 3 chrUextra 23049035 23049679 -5954977 - SAR_DM Satellite Satellite -581 891 246 1 760 1233 6 23 17 chrUextra 23049786 23049960 -5954696 + NTS_DM Other Other 66 240 0 1 760 1301 6 0 18 chrUextra 23049960 23050125 -5954531 + NTS_DM Other Other 1 162 -78 1 760 476 131 36 0 chrUextra 23050235 23050319 -5954337 + NTS_DM Other Other 4 90 -150 1 760 2828 173 12 9 chrUextra 23050543 23051186 -5953470 + SAR_DM Satellite Satellite 293 937 -535 1 760 2832 185 6 6 chrUextra 23051296 23051943 -5952713 - SAR_DM Satellite Satellite -542 930 284 1 760 939 0 0 0 chrUextra 23052051 23052159 -5952497 - NTS_DM Other Other -132 108 1 1 760 1861 0 17 13 chrUextra 23052159 23052398 -5952258 - NTS_DM Other Other 0 240 1 1 760 1252 18 0 6 chrUextra 23052480 23052645 -5952011 - NTS_DM Other Other -39 201 38 1 760 467 16 0 0 chrUextra 23052645 23052706 -5951950 - NTS_DM Other Other -107 133 73 1 760 2649 168 22 14 chrUextra 23052812 23053440 -5951216 - SAR_DM Satellite Satellite -514 958 326 1 760 3015 165 11 8 chrUextra 23053569 23054216 -5950440 + SAR_DM Satellite Satellite 369 1017 -455 1 760 2089 4 0 39 chrUextra 23054316 23054596 -5950060 - PROTOP_A DNA P -390 715 447 1 760 2706 28 0 0 chrUextra 23054604 23054931 -5949725 - PROTOP_A DNA P -778 327 1 1 760 405 196 0 10 chrUextra 23055071 23055169 -5949487 + DMLTR5 LTR Gypsy 170 266 0 1 760 351 85 661 14 chrUextra 23055168 23055300 -5949356 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 1 760 4709 23 0 3 chrUextra 23055826 23056404 -5948252 - R1_DM LINE R1 -2843 2513 1938 1 760 620 55 0 21 chrUextra 23056388 23056481 -5948175 - R1_DM LINE R1 -4741 615 525 1 760 5655 1 0 0 chrUextra 23056581 23057236 -5947420 + R1_DM LINE R1 2715 3369 -1987 1 760 5460 9 1 1 chrUextra 23057336 23057991 -5946665 + STALKER4_I LTR Gypsy 4421 5075 -1455 1 760 1670 0 5 0 chrUextra 23058091 23058292 -5946364 + DM176_I LTR Gypsy 6219 6420 0 1 760 3343 12 11 53 chrUextra 23058292 23058746 -5945910 + DM176_LTR LTR Gypsy 1 435 -72 1 760 1629 181 60 28 chrUextra 23058850 23059476 -5945180 - SAR_DM Satellite Satellite -493 645 1 1 760 256 0 0 0 chrUextra 23059601 23059633 -5945023 + PROTOP_B DNA P 1122 1153 0 1 760 775 263 22 107 chrUextra 23059656 23060254 -5944402 + Gypsy12_LTR LTR Gypsy 402 948 -1388 1 760 4535 73 6 8 chrUextra 23061112 23061762 -5942894 - R1_DM LINE R1 -4685 671 23 1 760 407 179 12 0 chrUextra 23061867 23061951 -5942705 + DM176_I LTR Gypsy 4197 4281 -2139 1 760 1111 29 0 0 chrUextra 23061950 23062087 -5942569 - DMCR1A LINE CR1 -3534 936 800 1 760 2588 31 30 103 chrUextra 23062085 23062521 -5942135 - DMCR1A LINE CR1 -4063 407 4 1 760 2751 167 22 13 chrUextra 23062621 23063257 -5941399 - SAR_DM Satellite Satellite -505 967 326 1 760 5350 5 0 0 chrUextra 23063376 23064031 -5940625 - QUASIMODO_I LTR Gypsy -964 5096 4442 1 760 5106 14 9 0 chrUextra 23064131 23064784 -5939872 + QUASIMODO_I LTR Gypsy 4355 5013 -1047 1 760 23 50 0 48 chrUextra 23065380 23065443 -5939213 + AT_rich Low_complexity Low_complexity 1 60 0 1 760 1367 28 0 0 chrUextra 23065641 23065819 -5938837 + G2_DM LINE Jockey 2922 3099 -3 1 760 3715 10 47 0 chrUextra 23065811 23066296 -5938360 - STALKER4_I LTR Gypsy -2859 3671 3164 1 760 3547 5 0 5 chrUextra 23066396 23066815 -5937841 - DM412B_LTR LTR Gypsy -154 417 1 1 760 530 9 130 4 chrUextra 23066815 23067046 -5937610 + (TA)n Simple_repeat Simple_repeat 1 260 0 1 760 1560 6 0 0 chrUextra 23067151 23067328 -5937328 + (ATAAG)n Simple_repeat Simple_repeat 1 177 0 1 760 1536 18 0 0 chrUextra 23067328 23067547 -5937109 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 760 5272 26 17 1 chrUextra 23067906 23068561 -5936095 + R1_DM LINE R1 1474 2138 -3218 1 11 2764 183 9 5 chrUextra 23068661 23069292 -5935364 - SAR_DM Satellite Satellite -593 879 246 1 761 383 109 0 0 chrUextra 23069252 23069316 -5935340 + ARS406_DM Unknown Unknown 1 64 -289 1 761 2761 182 21 11 chrUextra 23069417 23070071 -5934585 + SAR_DM Satellite Satellite 371 1031 -441 1 761 2275 17 0 0 chrUextra 23070171 23070461 -5934195 + DOC LINE Jockey 4436 4725 0 1 761 1634 166 11 11 chrUextra 23070466 23070826 -5933830 - SAR_DM Satellite Satellite -478 994 635 1 761 5537 6 0 0 chrUextra 23070926 23071581 -5933075 + FW_DM LINE Jockey 168 822 -3870 1 761 482 216 23 40 chrUextra 23071790 23071964 -5932692 + DNAREP1_DM LINE Penelope 146 316 -278 1 761 333 281 7 7 chrUextra 23071960 23072096 -5932560 - DNAREP1_DM LINE Penelope -291 303 168 1 761 26 30 0 0 chrUextra 23072112 23072145 -5932511 + AT_rich Low_complexity Low_complexity 1 33 0 1 761 422 240 0 0 chrUextra 23072240 23072336 -5932320 + DMCR1A LINE CR1 850 945 -3525 1 761 2223 78 5 85 chrUextra 23072440 23073088 -5931568 + DMSAT6 Satellite Satellite 1 596 -159 1 761 5704 0 1 0 chrUextra 23073191 23073846 -5930810 - DIVER_I LTR Pao -2143 3500 2845 1 761 5726 1 1 0 chrUextra 23073946 23074601 -5930055 + LSU-rRNA_Dme rRNA rRNA 3010 3665 -235 1 761 4806 41 9 0 chrUextra 23074701 23075356 -5929300 + Invader2_I LTR Gypsy 1437 2097 -2495 1 761 21 89 0 0 chrUextra 23076769 23076825 -5927831 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 5627 1 0 1 chrUextra 23076966 23077621 -5927035 - FW_DM LINE Jockey -905 3787 3134 1 761 2728 186 23 9 chrUextra 23077721 23078376 -5926280 + SAR_DM Satellite Satellite 195 858 -614 1 761 494 56 0 27 chrUextra 23078506 23078579 -5926077 - PROTOP DNA P -1500 2980 2910 1 761 2674 57 114 2 chrUextra 23078603 23079008 -5925648 - PROTOP DNA P -3981 499 50 1 761 3040 165 12 9 chrUextra 23079231 23079885 -5924771 - SAR_DM Satellite Satellite -446 1026 371 1 761 233 149 0 21 chrUextra 23080158 23080206 -5924450 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 761 244 128 0 21 chrUextra 23080451 23080499 -5924157 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 761 2719 185 6 9 chrUextra 23080742 23081380 -5923276 - SAR_DM Satellite Satellite -645 827 192 1 761 664 116 0 0 chrUextra 23081284 23081396 -5923260 + ARS406_DM Unknown Unknown 1 112 -241 1 761 2625 179 12 26 chrUextra 23081497 23082151 -5922505 + SAR_DM Satellite Satellite 469 1113 -359 1 761 69 13 0 0 chrUextra 23082812 23082888 -5921768 + AT_rich Low_complexity Low_complexity 1 76 0 1 761 2517 88 22 13 chrUextra 23083016 23083653 -5921003 + DMSAT6 Satellite Satellite 1 642 0 1 761 258 0 0 81 chrUextra 23083761 23083798 -5920858 - NTS_DM Other Other -182 58 25 1 761 21 57 0 0 chrUextra 23083824 23083859 -5920797 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 1252 18 0 6 chrUextra 23083859 23084024 -5920632 - NTS_DM Other Other -39 201 38 1 761 870 9 0 27 chrUextra 23084024 23084136 -5920520 - NTS_DM Other Other -107 133 25 1 761 1229 24 0 6 chrUextra 23084188 23084353 -5920303 - NTS_DM Other Other -39 201 38 1 761 449 17 0 0 chrUextra 23084353 23084413 -5920243 - NTS_DM Other Other -107 133 74 1 761 2846 180 8 6 chrUextra 23084524 23085171 -5919485 - SAR_DM Satellite Satellite -569 903 256 1 761 2492 85 18 14 chrUextra 23085271 23085926 -5918730 - DMSAT6 Satellite Satellite 0 657 1 1 761 655 186 7 14 chrUextra 23086134 23086276 -5918380 - HETRP_DM Satellite Satellite -203 1669 1529 1 761 629 193 7 14 chrUextra 23086411 23086553 -5918103 - HETRP_DM Satellite Satellite -203 1669 1529 1 761 34 24 0 0 chrUextra 23086785 23086826 -5917830 + AT_rich Low_complexity Low_complexity 1 41 0 1 761 21 95 0 0 chrUextra 23087040 23087103 -5917553 + AT_rich Low_complexity Low_complexity 1 63 0 1 761 2405 0 0 78 chrUextra 23087115 23087436 -5917220 + LSU-rRNA_Dme rRNA rRNA 1 296 -3604 1 761 662 200 6 19 chrUextra 23087588 23087746 -5916910 - HETRP_DM Satellite Satellite -188 1684 1529 1 761 491 208 8 16 chrUextra 23087909 23088031 -5916625 - HETRP_DM Satellite Satellite -203 1669 1549 1 761 192 40 0 0 chrUextra 23088031 23088056 -5916600 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 761 5608 0 1 1 chrUextra 23088291 23088946 -5915710 + LSU-rRNA_Dme rRNA rRNA 617 1271 -2629 1 761 280 344 13 6 chrUextra 23089142 23089300 -5915356 + BLASTOPIA_I LTR Gypsy 3541 3699 -782 1 761 2935 187 5 5 chrUextra 23089801 23090456 -5914200 + SAR_DM Satellite Satellite 392 1046 -426 1 761 5283 35 0 0 chrUextra 23090556 23091211 -5913445 - R1_DM LINE R1 -2541 2815 2161 1 761 329 43 0 0 chrUextra 23091311 23091357 -5913299 + R1_DM LINE R1 568 613 -4743 1 761 4282 48 38 3 chrUextra 23091360 23091940 -5912716 + R1_DM LINE R1 1000 1599 -3757 1 761 226 0 0 0 chrUextra 23091940 23091966 -5912690 + STALKER4_LTR LTR Gypsy 1 26 -376 1 761 2433 178 19 26 chrUextra 23092066 23092684 -5911972 - SAR_DM Satellite Satellite -668 804 191 1 761 562 218 0 0 chrUextra 23092587 23092720 -5911936 + ARS406_DM Unknown Unknown 1 133 -220 1 761 5435 9 5 3 chrUextra 23092821 23093476 -5911180 + LSU-rRNA_Dme rRNA rRNA 1107 1762 -2138 1 761 2809 182 8 9 chrUextra 23093587 23094231 -5910425 - SAR_DM Satellite Satellite -396 1076 434 1 761 262 0 0 0 chrUextra 23094331 23094364 -5910292 + HOBO DNA hAT 2984 3016 0 1 761 3030 3 0 0 chrUextra 23095086 23095434 -5909222 + R1_DM LINE R1 5009 5356 0 1 761 2659 3 3 0 chrUextra 23095432 23095741 -5908915 + LSU-rRNA_Dme rRNA rRNA 2640 2949 -951 1 761 5310 6 3 0 chrUextra 23095841 23096496 -5908160 - MAX_I LTR Pao -7025 889 233 1 761 5584 5 0 0 chrUextra 23096596 23097251 -5907405 + R1_DM LINE R1 2791 3445 -1911 1 761 2010 46 8 4 chrUextra 23097351 23097613 -5907043 + STALKER4_LTR LTR Gypsy 117 379 -23 1 761 28 48 0 0 chrUextra 23097751 23097793 -5906863 + AT_rich Low_complexity Low_complexity 1 42 0 1 761 748 234 5 5 chrUextra 23097800 23098006 -5906650 + Stalker2_I LTR Gypsy 291 496 -6906 1 761 2638 183 8 10 chrUextra 23098106 23098723 -5905933 - SAR_DM Satellite Satellite -662 810 195 1 761 769 107 0 8 chrUextra 23098629 23098761 -5905895 + ARS406_DM Unknown Unknown 1 131 -222 1 761 2704 6 3 0 chrUextra 23098861 23099209 -5905447 + QUASIMODO_I LTR Gypsy 5712 6060 0 1 761 2550 0 13 0 chrUextra 23099209 23099516 -5905140 + QUASIMODO_LTR LTR Gypsy 1 311 -347 1 761 1474 27 0 0 chrUextra 23099616 23099800 -5904856 - MICROPIA_LTR LTR Gypsy -292 184 1 1 761 3978 0 0 2 chrUextra 23099800 23100271 -5904385 - MICROPIA_I LTR Gypsy 0 4476 4007 1 761 814 37 0 27 chrUextra 23100373 23100485 -5904171 - NTS_DM Other Other -107 133 25 1 761 1252 18 0 6 chrUextra 23100537 23100702 -5903954 - NTS_DM Other Other -39 201 38 1 761 870 9 0 27 chrUextra 23100702 23100814 -5903842 - NTS_DM Other Other -107 133 25 1 761 1148 19 12 6 chrUextra 23100866 23101026 -5903630 - NTS_DM Other Other -39 201 41 1 761 5359 8 18 0 chrUextra 23101126 23101781 -5902875 - DM176_I LTR Gypsy -3708 2712 2046 1 761 2623 176 32 11 chrUextra 23101887 23102536 -5902120 - SAR_DM Satellite Satellite -512 960 298 1 761 4630 0 0 2 chrUextra 23102636 23103168 -5901488 - DIVER_I LTR Pao -996 4647 4117 1 761 1041 16 0 0 chrUextra 23103168 23103291 -5901365 + (TTTTG)n Simple_repeat Simple_repeat 5 127 0 1 761 2802 171 31 11 chrUextra 23103401 23104046 -5900610 - SAR_DM Satellite Satellite -396 1076 419 1 761 573 0 0 0 chrUextra 23104146 23104215 -5900441 - HMSBEAGLE_I LTR Gypsy -5492 1037 969 1 761 974 29 52 12 chrUextra 23104215 23104387 -5900269 + (TAA)n Simple_repeat Simple_repeat 1 179 0 1 761 3168 0 0 5 chrUextra 23104387 23104801 -5899855 - HMSBEAGLE_I LTR Gypsy -5733 796 385 1 761 4525 95 3 6 chrUextra 23104901 23105556 -5899100 + Gypsy12_I LTR Gypsy 1201 1853 -3693 1 761 5398 17 6 1 chrUextra 23105656 23106311 -5898345 + R1_DM LINE R1 3657 4314 -1042 1 761 5630 1 1 3 chrUextra 23106411 23107066 -5897590 + SSU-rRNA_Dme rRNA rRNA 1018 1671 -324 1 761 2936 177 9 8 chrUextra 23107166 23107821 -5896835 + SAR_DM Satellite Satellite 413 1068 -404 1 761 2597 31 0 3 chrUextra 23107921 23108242 -5896414 + DMRT1B LINE R1 3292 3611 -1572 1 761 2786 21 3 0 chrUextra 23108236 23108576 -5896080 + DMRT1B LINE R1 3718 4058 -1125 1 761 5636 0 1 3 chrUextra 23108676 23109331 -5895325 + SSU-rRNA_Dme rRNA rRNA 614 1267 -728 1 761 5662 1 1 1 chrUextra 23109431 23110086 -5894570 - SSU-rRNA_Dme rRNA rRNA -724 1271 617 1 761 1373 0 12 0 chrUextra 23110186 23110349 -5894307 + SSU-rRNA_Dme rRNA rRNA 1831 1995 0 1 761 21 89 0 0 chrUextra 23110368 23110424 -5894232 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 2290 181 46 21 chrUextra 23110941 23111596 -5893060 - SAR_DM Satellite Satellite -674 671 1 1 761 2001 177 120 32 chrUextra 23111719 23112350 -5892306 - TART LINE telomeric -4751 9726 9040 1 761 2871 176 12 9 chrUextra 23113961 23114616 -5890040 - SAR_DM Satellite Satellite -532 940 284 1 761 5359 9 0 0 chrUextra 23114716 23115371 -5889285 + STALKER4_I LTR Gypsy 2923 3577 -2953 1 761 5580 5 2 0 chrUextra 23115471 23116116 -5888540 + R2_DM LINE R2 2231 2876 -731 1 761 264 0 80 60 chrUextra 23116226 23116276 -5888380 + NTS_DM Other Other 190 240 0 1 761 1847 4 17 13 chrUextra 23116276 23116515 -5888141 + NTS_DM Other Other 1 240 0 1 761 1301 6 0 18 chrUextra 23116515 23116680 -5887976 + NTS_DM Other Other 1 162 -78 1 761 463 131 36 0 chrUextra 23116790 23116874 -5887782 + NTS_DM Other Other 4 90 -150 1 761 5630 0 0 1 chrUextra 23116981 23117636 -5887020 - LSU-rRNA_Dme rRNA rRNA -2642 1258 605 1 761 5410 1 3 0 chrUextra 23117736 23118391 -5886265 + Invader2_I LTR Gypsy 2153 2809 -1783 1 761 5418 23 1 0 chrUextra 23118491 23119146 -5885510 - FW_DM LINE Jockey -3383 1309 654 1 761 2863 184 9 6 chrUextra 23119254 23119901 -5884755 - SAR_DM Satellite Satellite -569 903 255 1 761 1620 28 0 0 chrUextra 23120001 23120542 -5884114 + (AGATG)n Simple_repeat Simple_repeat 1 541 0 1 761 261 162 0 0 chrUextra 23120549 23120617 -5884039 + (ACATG)n Simple_repeat Simple_repeat 5 72 0 1 761 4732 34 8 17 chrUextra 23120756 23121411 -5883245 + Gypsy12_LTR LTR Gypsy 1185 1833 -503 1 761 362 53 0 18 chrUextra 23121512 23121569 -5883087 + ARS406_DM Unknown Unknown 103 158 -195 1 761 2557 155 30 14 chrUextra 23121576 23122145 -5882511 - SAR_DM Satellite Satellite -569 903 326 1 761 3106 165 8 8 chrUextra 23122266 23122920 -5881736 + SAR_DM Satellite Satellite 389 1042 -430 1 761 1739 0 5 0 chrUextra 23123021 23123222 -5881434 + LSU-rRNA_Dme rRNA rRNA 2431 2632 -1268 1 761 3874 0 4 2 chrUextra 23123222 23123676 -5880980 + R1_DM LINE R1 1 455 -4901 1 761 488 119 36 0 chrUextra 23123877 23123961 -5880695 + NTS_DM Other Other 4 90 -150 1 761 28 48 0 0 chrUextra 23124234 23124276 -5880380 + AT_rich Low_complexity Low_complexity 1 42 0 1 761 5120 0 3 38 chrUextra 23124531 23125186 -5879470 - LSU-rRNA_Dme rRNA rRNA -3082 818 187 1 761 5619 1 1 1 chrUextra 23125287 23125941 -5878715 + LSU-rRNA_Dme rRNA rRNA 692 1345 -2555 1 761 5424 12 0 1 chrUextra 23126796 23127451 -5877205 + NINJA_I LTR Pao 844 1497 -4514 1 761 2002 32 3 34 chrUextra 23127565 23127857 -5876799 + BATUMI_I LTR Pao 7002 7284 -679 1 761 1884 91 97 29 chrUextra 23127857 23128206 -5876450 + BATUMI_I LTR Pao 1 373 -7590 1 761 306 302 19 19 chrUextra 23128326 23128488 -5876168 + MDG3_I LTR Gypsy 3263 3424 -1562 1 761 5529 3 0 0 chrUextra 23129061 23129716 -5874940 + LSU-rRNA_Dme rRNA rRNA 440 1094 -2806 1 761 2440 48 18 0 chrUextra 23130138 23130471 -5874185 - IDEFIX_I LTR Gypsy -1793 3835 3497 1 761 1699 63 99 64 chrUextra 23130571 23131008 -5873648 + MDG1_I LTR Gypsy 6008 6596 0 1 761 383 68 17 0 chrUextra 23131024 23131083 -5873573 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 761 898 84 23 0 chrUextra 23131095 23131226 -5873430 + MDG1_LTR LTR Gypsy 123 256 -186 1 761 1412 83 78 14 chrUextra 23131329 23131548 -5873108 + Gypsy12_I LTR Gypsy 5314 5546 0 1 761 1613 204 18 20 chrUextra 23131560 23131961 -5872695 + Gypsy12_LTR LTR Gypsy 13 412 -1924 1 761 2944 175 9 8 chrUextra 23132083 23132735 -5871921 + SAR_DM Satellite Satellite 352 1004 -468 1 761 192 40 0 0 chrUextra 23132971 23132996 -5871660 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 761 491 208 8 16 chrUextra 23132996 23133118 -5871538 + HETRP_DM Satellite Satellite 1549 1669 -203 1 761 662 200 6 19 chrUextra 23133287 23133445 -5871211 + HETRP_DM Satellite Satellite 1529 1684 -188 1 761 2370 176 64 14 chrUextra 23133589 23134241 -5870415 + SAR_DM Satellite Satellite 1 684 -208 1 761 588 6 0 137 chrUextra 23135101 23135306 -5869350 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 1 761 208 132 132 0 chrUextra 23135254 23135337 -5869319 + (CAAA)n Simple_repeat Simple_repeat 2 95 0 1 761 2821 179 11 9 chrUextra 23137365 23138013 -5866643 + SAR_DM Satellite Satellite 282 930 -542 1 761 2795 179 6 8 chrUextra 23138114 23138745 -5865911 - SAR_DM Satellite Satellite -645 827 198 1 761 640 125 0 0 chrUextra 23138655 23138767 -5865889 + ARS406_DM Unknown Unknown 1 112 -241 1 761 1515 191 15 3 chrUextra 23139629 23140275 -5864381 - SAR_DM Satellite Satellite -839 654 1 1 761 5741 1 0 0 chrUextra 23140375 23141029 -5863627 - SSU-rRNA_Dme rRNA rRNA -1118 877 224 1 761 4832 39 0 18 chrUextra 23141129 23141783 -5862873 + BATUMI_I LTR Pao 2655 3296 -4667 1 761 908 67 6 18 chrUextra 23141888 23142535 -5862121 + RSP Satellite Satellite 1 639 0 1 761 5408 21 14 0 chrUextra 23142637 23143291 -5861365 + CIRCE LINE Composite 5514 6176 -180 1 761 5572 5 1 0 chrUextra 23143391 23144039 -5860617 - LSU-rRNA_Dme rRNA rRNA -1464 2436 1788 1 761 1157 15 0 0 chrUextra 23144313 23144448 -5860208 - 5S_DM RNA RNA 0 135 1 1 761 1076 0 8 0 chrUextra 23144672 23144799 -5859857 - 5S_DM RNA RNA 0 135 8 1 761 230 23 0 0 chrUextra 23144899 23144942 -5859714 + S_DM DNA Tc1 95 137 -1599 1 761 186 71 0 0 chrUextra 23144942 23144970 -5859686 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 761 4727 0 0 0 chrUextra 23144970 23145553 -5859103 - DOC6_DM LINE Jockey -6 4216 3634 1 761 5453 21 0 0 chrUextra 23145653 23146307 -5858349 + R1_DM LINE R1 1956 2609 -2747 1 761 238 0 129 0 chrUextra 23146561 23146623 -5858033 + (CAGG)n Simple_repeat Simple_repeat 2 71 0 1 761 1146 0 0 7 chrUextra 23146624 23146760 -5857896 - 5S_DM RNA RNA 0 135 1 1 761 526 16 0 0 chrUextra 23146998 23147061 -5857595 - 5S_DM RNA RNA 0 135 73 1 761 4734 45 93 8 chrUextra 23147161 23147815 -5856841 - R1_DM LINE R1 -3607 1749 1040 1 761 5048 3 0 0 chrUextra 23148669 23149249 -5855407 + LSU-rRNA_Dme rRNA rRNA 2053 2632 -1268 1 761 584 0 27 0 chrUextra 23149249 23149323 -5855333 + R1_DM LINE R1 1 76 -5280 1 761 2735 164 35 21 chrUextra 23149423 23150077 -5854579 - SAR_DM Satellite Satellite -543 929 267 1 761 5319 23 0 1 chrUextra 23150177 23150831 -5853825 - R1_DM LINE R1 -1818 3538 2886 1 761 2711 177 48 14 chrUextra 23150932 23151585 -5853071 + SAR_DM Satellite Satellite 246 920 -552 1 761 5216 34 0 0 chrUextra 23151685 23152339 -5852317 + R1_DM LINE R1 2496 3149 -2207 1 761 2778 189 8 8 chrUextra 23152439 23153091 -5851565 + SAR_DM Satellite Satellite 410 1061 -411 1 761 733 174 0 0 chrUextra 23153193 23153337 -5851319 - ARS406_DM Unknown Unknown -209 144 1 1 761 3000 226 29 44 chrUextra 23153234 23154148 -5850508 + SAR_DM Satellite Satellite 1 953 -745 1 761 283 147 63 51 chrUextra 23154148 23154227 -5850429 - XDMR Unknown Unknown 0 361 282 1 761 3000 226 29 44 chrUextra 23154227 23154601 -5850055 + SAR_DM Satellite Satellite 954 1345 -353 1 761 5668 5 0 0 chrUextra 23154701 23155355 -5849301 + MDG3_I LTR Gypsy 948 1601 -3385 1 761 3297 3 0 0 chrUextra 23155732 23156109 -5848547 - ROO_LTR LTR Pao 0 428 52 1 761 2834 179 11 9 chrUextra 23156210 23156857 -5847799 + SAR_DM Satellite Satellite 282 929 -543 1 761 2976 172 9 8 chrUextra 23156963 23157614 -5847042 - SAR_DM Satellite Satellite -539 933 282 1 761 5362 23 1 0 chrUextra 23157717 23158369 -5846287 - R1_DM LINE R1 -1655 3701 3049 1 761 4767 32 2 3 chrUextra 23158471 23159070 -5845586 + R1_DM LINE R1 4672 5269 -87 1 761 335 130 0 0 chrUextra 23159071 23159125 -5845531 + R1_DM LINE R1 77 130 -5226 1 761 4881 11 6 9 chrUextra 23159225 23159879 -5844777 + STALKER4_I LTR Gypsy 5807 6458 -72 1 761 2454 154 173 28 chrUextra 23159979 23160633 -5844023 - TART LINE telomeric -7409 7068 6320 1 761 3937 42 0 27 chrUextra 23160869 23161387 -5843269 - Baggins1 LINE LOA 0 5453 4950 1 761 870 24 0 8 chrUextra 23161487 23161614 -5843042 + NTS_DM Other Other 76 201 -39 1 761 21 57 0 0 chrUextra 23161614 23161649 -5843007 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 806 19 9 27 chrUextra 23161675 23161786 -5842870 + NTS_DM Other Other 25 133 -107 1 761 1438 15 20 20 chrUextra 23161786 23161989 -5842667 + NTS_DM Other Other 38 240 0 1 761 1229 20 0 0 chrUextra 23161989 23162141 -5842515 + NTS_DM Other Other 1 152 -88 1 761 5527 0 1 0 chrUextra 23162241 23162895 -5841761 + ROO_I LTR Pao 4737 5391 -2865 1 761 1772 0 5 0 chrUextra 23162995 23163204 -5841452 - STALKER4_LTR LTR Gypsy -192 210 1 1 761 3291 16 9 2 chrUextra 23163204 23163649 -5841007 - STALKER4_I LTR Gypsy 0 6530 6083 1 761 1659 170 13 11 chrUextra 23163761 23164142 -5840514 + SAR_DM Satellite Satellite 369 750 -722 1 761 1985 12 0 20 chrUextra 23164150 23164403 -5840253 - DOC2_DM LINE Jockey 0 4793 4546 1 761 210 225 21 53 chrUextra 23164784 23164878 -5839778 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 1 761 22 0 0 0 chrUextra 23165030 23165052 -5839604 + AT_rich Low_complexity Low_complexity 1 22 0 1 761 234 0 0 0 chrUextra 23165120 23165146 -5839510 + (T)n Simple_repeat Simple_repeat 1 26 0 1 761 759 40 0 0 chrUextra 23165259 23165358 -5839298 + (CTTAT)n Simple_repeat Simple_repeat 5 103 0 1 761 2295 4 0 0 chrUextra 23165359 23165626 -5839030 - MDG3_LTR LTR Gypsy 0 267 1 1 761 2306 3 0 0 chrUextra 23165626 23165911 -5838745 - MDG3_I LTR Gypsy 0 4986 4702 1 761 2469 184 30 16 chrUextra 23166011 23166659 -5837997 + SAR_DM Satellite Satellite 1 657 -396 1 761 435 78 0 0 chrUextra 23166765 23166829 -5837827 + (TTCTC)n Simple_repeat Simple_repeat 5 68 0 1 761 2546 0 7 7 chrUextra 23167519 23167829 -5836827 + LSU-rRNA_Dme rRNA rRNA 1479 1788 -2112 1 761 2646 0 0 0 chrUextra 23167873 23168173 -5836483 + LSU-rRNA_Dme rRNA rRNA 1788 2087 -1813 1 761 1713 0 18 14 chrUextra 23168273 23168496 -5836160 + NTS_DM Other Other 17 240 0 1 761 1847 4 17 13 chrUextra 23168496 23168735 -5835921 + NTS_DM Other Other 1 240 0 1 761 1238 19 0 24 chrUextra 23168735 23168901 -5835755 + NTS_DM Other Other 1 162 -78 1 761 2738 193 19 22 chrUextra 23169027 23169680 -5834976 + SAR_DM Satellite Satellite 1 651 -208 1 761 2460 185 19 21 chrUextra 23169797 23170421 -5834235 + SAR_DM Satellite Satellite 496 1118 -354 1 761 297 145 32 0 chrUextra 23170368 23170430 -5834226 - XDMR Unknown Unknown 0 361 298 1 761 276 339 16 11 chrUextra 23170996 23171187 -5833469 - BLASTOPIA_I LTR Gypsy -749 3732 3541 1 761 4967 5 3 0 chrUextra 23171289 23171887 -5832769 - STALKER4_I LTR Gypsy -1269 5261 4662 1 761 581 0 0 0 chrUextra 23171874 23171943 -5832713 - STALKER4_I LTR Gypsy -2910 3620 3552 1 761 1796 35 0 0 chrUextra 23172043 23172270 -5832386 + DMCR1A LINE CR1 1426 1652 -2818 1 761 3531 28 0 5 chrUextra 23172265 23172697 -5831959 + DMCR1A LINE CR1 2027 2456 -2014 1 761 2900 163 9 11 chrUextra 23172797 23173430 -5831226 - SAR_DM Satellite Satellite -515 957 326 1 761 689 0 0 11 chrUextra 23173553 23173642 -5831014 + STALKER4_I LTR Gypsy 5254 5341 -1189 1 761 4649 4 0 0 chrUextra 23173642 23174205 -5830451 + STALKER4_I LTR Gypsy 5687 6249 -281 1 761 3011 55 74 3 chrUextra 23174305 23174959 -5829697 + PROTOP_A DNA P 490 1055 -50 1 761 23 0 0 0 chrUextra 23176571 23176594 -5828062 + AT_rich Low_complexity Low_complexity 1 23 0 1 761 243 245 39 10 chrUextra 23177069 23177172 -5827484 + MDG1_I LTR Gypsy 1748 1853 -4743 1 761 5458 20 0 0 chrUextra 23177321 23177975 -5826681 + DMRT1B LINE R1 1939 2592 -2591 1 761 5505 20 1 0 chrUextra 23178075 23178729 -5825927 + MAX_I LTR Pao 3612 4266 -3648 1 761 284 316 47 47 chrUextra 23179091 23179327 -5825329 + Copia2_I LTR Copia 974 1209 -2953 1 761 2927 173 9 8 chrUextra 23179583 23180231 -5824425 + SAR_DM Satellite Satellite 247 895 -577 1 761 313 141 59 0 chrUextra 23180337 23180422 -5824234 + GA-rich Low_complexity Low_complexity 5 94 0 1 761 1408 28 11 0 chrUextra 23180422 23180599 -5824057 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 761 2762 3 3 0 chrUextra 23181091 23181410 -5823246 + SSU-rRNA_Dme rRNA rRNA 1676 1995 0 1 761 21 89 0 0 chrUextra 23181429 23181485 -5823171 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 444 176 143 0 chrUextra 23181845 23181964 -5822692 - ARS406_DM Unknown Unknown -217 136 1 1 761 1767 189 26 5 chrUextra 23181860 23182497 -5822159 + SAR_DM Satellite Satellite 1 650 -707 1 761 1215 0 23 23 chrUextra 23182599 23182774 -5821882 + NTS_DM Other Other 66 240 0 1 761 1861 0 17 13 chrUextra 23182774 23183013 -5821643 + NTS_DM Other Other 1 240 0 1 761 1839 4 17 13 chrUextra 23183013 23183252 -5821404 + NTS_DM Other Other 1 240 0 1 761 4247 0 2 2 chrUextra 23183353 23183842 -5820814 + SSU-rRNA_Dme rRNA rRNA 1507 1995 0 1 761 21 89 0 0 chrUextra 23183861 23183917 -5820739 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 2459 10 3 0 chrUextra 23184107 23184398 -5820258 + R1_DM LINE R1 5065 5356 0 1 761 3111 8 0 0 chrUextra 23184396 23184761 -5819895 + LSU-rRNA_Dme rRNA rRNA 2640 3004 -896 1 761 460 0 0 0 chrUextra 23184896 23184950 -5819706 + Invader1_I LTR Gypsy 3133 3186 0 1 761 3591 12 2 0 chrUextra 23184950 23185372 -5819284 + Invader1_LTR LTR Gypsy 1 423 0 1 761 4742 29 0 5 chrUextra 23185615 23186209 -5818447 - R1_DM LINE R1 -3438 1918 1328 1 761 402 81 16 16 chrUextra 23186206 23186269 -5818387 - R1_DM LINE R1 -4179 1177 1115 1 761 5462 25 0 0 chrUextra 23186369 23187023 -5817633 - MAX_I LTR Pao -1595 6319 5666 1 761 2737 174 17 12 chrUextra 23187128 23187768 -5816888 - SAR_DM Satellite Satellite -478 994 352 1 761 331 120 0 0 chrUextra 23187910 23187960 -5816696 + Invader1_I LTR Gypsy 3137 3186 0 1 761 2399 109 44 19 chrUextra 23187961 23188373 -5816283 + Invader1_LTR LTR Gypsy 2 423 0 1 761 255 203 108 0 chrUextra 23188445 23188519 -5816137 - HMSBEAGLE_I LTR Gypsy -5951 578 497 1 761 2942 163 33 41 chrUextra 23188631 23189271 -5815385 - Gypsy12_LTR LTR Gypsy -38 2298 1664 1 761 1440 177 120 20 chrUextra 23189385 23189777 -5814879 - Stalker2_I LTR Gypsy -6681 721 291 1 761 28 48 0 0 chrUextra 23189784 23189826 -5814830 + AT_rich Low_complexity Low_complexity 1 42 0 1 761 1132 89 2 19 chrUextra 23189860 23190039 -5814617 - STALKER4_LTR LTR Gypsy -3 399 227 1 761 4482 65 5 6 chrUextra 23190168 23190790 -5813866 + R1_DM LINE R1 1 621 -4735 1 761 1949 200 48 64 chrUextra 23190893 23191546 -5813110 - TAHRE LINE telomeric -2861 7602 6961 1 761 5585 3 0 0 chrUextra 23191650 23192301 -5812355 - DMRT1A LINE R1 -3350 1833 1183 1 761 5160 2 0 38 chrUextra 23192401 23193055 -5811601 - LSU-rRNA_Dme rRNA rRNA -3232 668 40 1 761 201 305 24 12 chrUextra 23193567 23193650 -5811006 + (TCG)n Simple_repeat Simple_repeat 3 86 0 1 761 2956 168 17 9 chrUextra 23193909 23194563 -5810093 - SAR_DM Satellite Satellite -396 1076 418 1 761 290 292 98 24 chrUextra 23194664 23194787 -5809869 + Gypsy_DS LTR Gypsy 3204 3335 -4187 1 761 1394 30 64 0 chrUextra 23194727 23194930 -5809726 + TLD2 Unknown Unknown 1 216 -2 1 761 239 277 92 48 chrUextra 23194755 23195047 -5809609 + DM297_I LTR Gypsy 2668 2972 -3195 1 761 2856 178 8 9 chrUextra 23195418 23196071 -5808585 + SAR_DM Satellite Satellite 267 918 -554 1 761 5439 5 1 3 chrUextra 23196175 23196825 -5807831 - R1_DM LINE R1 -1437 3919 3271 1 761 590 47 0 0 chrUextra 23196925 23197011 -5807645 - R1_DM LINE R1 -4633 723 638 1 761 1190 66 6 0 chrUextra 23197009 23197176 -5807480 - R1_DM LINE R1 -5188 168 1 1 761 888 27 27 0 chrUextra 23197209 23197320 -5807336 - R1_DM LINE R1 0 5356 5243 1 761 2038 15 50 0 chrUextra 23197317 23197579 -5807077 - R1_DM LINE R1 -290 5066 4792 1 761 463 0 0 0 chrUextra 23197679 23197732 -5806924 - NTS_DM Other Other -187 53 1 1 761 1861 0 17 13 chrUextra 23197732 23197971 -5806685 - NTS_DM Other Other 0 240 1 1 761 1861 0 17 13 chrUextra 23197971 23198210 -5806446 - NTS_DM Other Other 0 240 1 1 761 307 25 0 0 chrUextra 23198293 23198333 -5806323 - NTS_DM Other Other -39 201 162 1 761 5152 40 28 0 chrUextra 23198433 23199087 -5805569 + R1_DM LINE R1 1250 1921 -3435 1 761 647 180 12 62 chrUextra 23199280 23199440 -5805216 - HETRP_DM Satellite Satellite -203 1669 1518 1 761 641 185 6 62 chrUextra 23199557 23199718 -5804938 - HETRP_DM Satellite Satellite -203 1669 1518 1 762 5211 21 25 1 chrUextra 23199941 23200595 -5804061 - STALKER4_I LTR Gypsy -1428 5102 4434 1 762 2023 51 166 173 chrUextra 23200695 23201022 -5803634 - ROO_I LTR Pao -7250 1006 642 1 762 372 138 0 0 chrUextra 23201022 23201087 -5803569 + (CTG)n Simple_repeat Simple_repeat 1 65 0 1 762 2023 51 166 173 chrUextra 23201087 23201349 -5803307 - ROO_I LTR Pao -7615 641 422 1 762 5717 0 0 1 chrUextra 23201449 23202103 -5802553 + SSU-rRNA_Dme rRNA rRNA 298 950 -1045 1 762 1620 0 0 0 chrUextra 23202222 23202402 -5802254 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 762 1744 21 17 17 chrUextra 23202969 23203209 -5801447 + NTS_DM Other Other 1 240 0 1 762 1821 8 17 13 chrUextra 23203209 23203448 -5801208 + NTS_DM Other Other 1 240 0 1 762 1339 12 0 0 chrUextra 23203448 23203611 -5801045 + NTS_DM Other Other 1 163 -77 1 762 474 0 65 39 chrUextra 23203711 23203788 -5800868 + NTS_DM Other Other 162 240 0 1 762 1861 0 17 13 chrUextra 23203788 23204027 -5800629 + NTS_DM Other Other 1 240 0 1 762 1847 4 17 13 chrUextra 23204027 23204266 -5800390 + NTS_DM Other Other 1 240 0 1 762 828 0 0 10 chrUextra 23204266 23204365 -5800291 + NTS_DM Other Other 1 98 -142 1 762 2073 165 19 8 chrUextra 23204465 23205101 -5799555 + SAR_DM Satellite Satellite 1 643 -672 1 762 1580 15 0 3 chrUextra 23205973 23206315 -5798341 + (GAGAA)n Simple_repeat Simple_repeat 1 341 0 1 762 2623 181 9 9 chrUextra 23207482 23208111 -5796545 - SAR_DM Satellite Satellite -645 827 199 1 762 622 115 0 0 chrUextra 23208022 23208126 -5796530 + ARS406_DM Unknown Unknown 1 104 -249 1 762 1381 32 21 11 chrUextra 23208337 23208525 -5796131 - ACCORD2_I LTR Gypsy -5845 1367 1178 1 762 255 79 0 0 chrUextra 23208525 23208563 -5796093 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 762 521 0 0 0 chrUextra 23208563 23208623 -5796033 - ACCORD2_I LTR Gypsy -6072 1140 1081 1 762 2006 0 0 0 chrUextra 23208623 23208855 -5795801 + MICROPIA_LTR LTR Gypsy 1 232 -244 1 762 2917 164 19 14 chrUextra 23208989 23209639 -5795017 + SAR_DM Satellite Satellite 385 1037 -435 1 762 453 45 45 0 chrUextra 23209743 23209810 -5794846 - Stalker2_I LTR Gypsy -5759 1643 1574 1 762 3109 10 0 8 chrUextra 23210009 23210397 -5794259 - Stalker2_I LTR Gypsy -5810 1592 1208 1 762 1620 0 0 0 chrUextra 23210498 23210883 -5793773 + (TTGTG)n Simple_repeat Simple_repeat 1 385 0 1 762 2312 8 0 0 chrUextra 23210883 23211151 -5793505 + DMRT1B LINE R1 3536 3803 -1380 1 762 2825 166 13 8 chrUextra 23211272 23211902 -5792754 + SAR_DM Satellite Satellite 326 958 -514 1 762 5424 15 1 1 chrUextra 23212005 23212659 -5791997 + R1_DM LINE R1 3643 4296 -1060 1 762 5596 1 0 0 chrUextra 23212759 23213413 -5791243 - LSU-rRNA_Dme rRNA rRNA -2769 1131 478 1 762 2339 174 5 9 chrUextra 23213513 23214061 -5790595 + SAR_DM Satellite Satellite 1 651 -447 1 762 774 57 0 0 chrUextra 23214061 23214167 -5790489 - ARS406_DM Unknown Unknown -164 189 84 1 762 2219 95 23 41 chrUextra 23214267 23214921 -5789735 - DMSAT6 Satellite Satellite -39 641 1 1 762 2806 179 11 9 chrUextra 23215021 23215675 -5788981 + SAR_DM Satellite Satellite 284 938 -534 1 762 4838 53 11 0 chrUextra 23215775 23216429 -5788227 + TART LINE telomeric 262 922 -13555 1 762 5023 37 0 0 chrUextra 23216530 23217183 -5787473 - MDG1_I LTR Gypsy -1302 5294 4642 1 762 762 0 0 0 chrUextra 23217283 23217372 -5787284 - NTS_DM Other Other -114 126 38 1 762 840 9 0 35 chrUextra 23217372 23217485 -5787171 - NTS_DM Other Other -107 133 25 1 762 22 56 0 0 chrUextra 23217511 23217547 -5787109 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 255 125 0 0 chrUextra 23217560 23217600 -5787056 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 246 150 0 0 chrUextra 23217643 23217683 -5786973 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 246 150 0 0 chrUextra 23217735 23217775 -5786881 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 246 150 0 0 chrUextra 23217827 23217867 -5786789 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 22 56 0 0 chrUextra 23217872 23217908 -5786748 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 5618 1 1 3 chrUextra 23218791 23219445 -5785211 - SSU-rRNA_Dme rRNA rRNA -565 1430 778 1 762 5446 28 0 0 chrUextra 23219545 23220199 -5784457 + DIVER_I LTR Pao 1930 2583 -3060 1 762 702 12 0 0 chrUextra 23220299 23220382 -5784274 + 5S_DM RNA RNA 53 135 0 1 762 1150 7 0 0 chrUextra 23220623 23220758 -5783898 + 5S_DM RNA RNA 1 135 0 1 762 5734 0 0 0 chrUextra 23221053 23221707 -5782949 + DOC LINE Jockey 3491 4144 -581 1 762 2874 48 10 15 chrUextra 23221807 23222209 -5782447 + BATUMI_I LTR Pao 6602 7001 -962 1 762 1886 97 11 11 chrUextra 23222169 23222461 -5782195 - BATUMI_I LTR Pao -1543 6420 6195 1 762 5652 9 1 1 chrUextra 23223315 23223969 -5780687 + G_DM LINE Jockey 1787 2440 -1906 1 762 2795 186 16 12 chrUextra 23224069 23224712 -5779944 + SAR_DM Satellite Satellite 432 1076 -396 1 762 5143 47 20 14 chrUextra 23224822 23225473 -5779183 - DMCR1A LINE CR1 -3201 1269 615 1 762 5746 11 6 0 chrUextra 23225575 23226228 -5778428 - R2_DM LINE R2 -2706 901 245 1 762 2876 186 26 6 chrUextra 23226332 23226977 -5777679 - SAR_DM Satellite Satellite -620 852 195 1 762 2996 186 9 9 chrUextra 23227082 23227734 -5776922 - SAR_DM Satellite Satellite -572 900 249 1 762 3032 178 8 9 chrUextra 23227840 23228487 -5776169 - SAR_DM Satellite Satellite -417 1055 410 1 762 2893 187 9 8 chrUextra 23228599 23229240 -5775416 - SAR_DM Satellite Satellite -417 1055 414 1 762 1985 40 61 0 chrUextra 23229746 23229993 -5774663 + PROTOP DNA P 1 262 -4218 1 762 5907 5 0 0 chrUextra 23230095 23230746 -5773910 - Gypsy6_I LTR Gypsy -3570 3442 2792 1 762 5719 18 0 0 chrUextra 23230846 23231499 -5773157 - R1_DM LINE R1 -1609 3747 3095 1 762 3073 175 8 9 chrUextra 23231599 23232240 -5772416 + SAR_DM Satellite Satellite 417 1056 -416 1 762 2767 196 6 9 chrUextra 23232352 23232999 -5771657 - SAR_DM Satellite Satellite -604 868 224 1 762 3249 161 29 6 chrUextra 23233109 23233758 -5770898 - SAR_DM Satellite Satellite -425 1047 384 1 762 3008 182 12 8 chrUextra 23233858 23234511 -5770145 + SAR_DM Satellite Satellite 278 933 -539 1 762 2556 83 14 20 chrUextra 23234612 23235264 -5769392 + DMSAT6 Satellite Satellite 1 648 -97 1 762 5658 20 0 0 chrUextra 23236117 23236770 -5767886 - R1_DM LINE R1 -2231 3125 2473 1 762 2937 174 24 11 chrUextra 23237623 23238252 -5766404 - SAR_DM Satellite Satellite -641 831 195 1 762 701 112 9 0 chrUextra 23238160 23238276 -5766380 + ARS406_DM Unknown Unknown 1 117 -236 1 762 1736 60 40 0 chrUextra 23238376 23238628 -5766028 - PROTOP_B DNA P -716 437 176 1 762 520 247 17 29 chrUextra 23238620 23238795 -5765861 + QUASIMODO_I LTR Gypsy 5527 5699 -361 1 762 1901 13 56 4 chrUextra 23238796 23239029 -5765627 + IVK_DM LINE I 1 245 -5157 1 762 2527 175 101 11 chrUextra 23239129 23239766 -5764890 - SAR_DM Satellite Satellite -453 1019 326 1 762 3080 161 17 17 chrUextra 23241391 23242041 -5762615 - SAR_DM Satellite Satellite -549 923 274 1 762 3096 168 15 9 chrUextra 23242141 23242794 -5761862 + SAR_DM Satellite Satellite 205 861 -611 1 762 22 56 0 0 chrUextra 23242926 23242962 -5761694 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 3426 48 0 7 chrUextra 23243124 23243547 -5761109 + G2_DM LINE Jockey 1411 1830 -1272 1 762 5093 0 3 73 chrUextra 23243647 23244300 -5760356 + LSU-rRNA_Dme rRNA rRNA 1600 2206 -1694 1 762 3083 174 11 9 chrUextra 23244400 23245051 -5759605 - SAR_DM Satellite Satellite -396 1076 425 1 762 2170 73 7 3 chrUextra 23245157 23245457 -5759199 - R1_DM LINE R1 -5055 301 1 1 762 2751 19 0 3 chrUextra 23245490 23245806 -5758850 - R1_DM LINE R1 0 5356 5042 1 762 486 108 27 0 chrUextra 23245907 23245981 -5758675 - NTS_DM Other Other -161 79 4 1 762 1355 6 0 18 chrUextra 23246091 23246256 -5758400 - NTS_DM Other Other -78 162 1 1 762 1903 0 21 13 chrUextra 23246256 23246494 -5758162 - NTS_DM Other Other 0 240 1 1 762 434 0 62 46 chrUextra 23246494 23246559 -5758097 - NTS_DM Other Other 0 240 175 1 762 2948 53 72 3 chrUextra 23247412 23248065 -5756591 + PROTOP DNA P 292 857 -248 1 762 3038 170 8 8 chrUextra 23248166 23248799 -5755857 - SAR_DM Satellite Satellite -645 827 195 1 762 691 125 0 0 chrUextra 23248706 23248818 -5755838 + ARS406_DM Unknown Unknown 1 112 -241 1 762 3074 161 11 11 chrUextra 23248930 23249563 -5755093 + SAR_DM Satellite Satellite 326 958 -514 1 762 924 0 0 27 chrUextra 23249705 23249817 -5754839 + NTS_DM Other Other 25 133 -107 1 762 1427 10 19 34 chrUextra 23249817 23250023 -5754633 + NTS_DM Other Other 38 240 0 1 762 1835 17 17 17 chrUextra 23250023 23250263 -5754393 + NTS_DM Other Other 1 240 0 1 762 516 16 16 0 chrUextra 23250263 23250324 -5754332 + NTS_DM Other Other 1 62 -178 1 762 1374 21 20 20 chrUextra 23250425 23250620 -5754036 - NTS_DM Other Other -8 232 38 1 762 828 10 0 0 chrUextra 23250620 23250716 -5753940 - NTS_DM Other Other -107 133 38 1 762 907 9 0 27 chrUextra 23250716 23250828 -5753828 - NTS_DM Other Other -107 133 25 1 762 1304 18 0 6 chrUextra 23250880 23251045 -5753611 - NTS_DM Other Other -39 201 38 1 762 235 0 0 0 chrUextra 23251045 23251077 -5753579 - NTS_DM Other Other -107 133 102 1 762 5805 3 1 3 chrUextra 23251177 23251830 -5752826 - LSU-rRNA_Dme rRNA rRNA -2479 1421 770 1 762 5781 0 1 1 chrUextra 23251930 23252583 -5752073 - LSU-rRNA_Dme rRNA rRNA -2705 1195 543 1 762 2914 173 14 12 chrUextra 23252683 23253326 -5751330 + SAR_DM Satellite Satellite 418 1061 -411 1 762 4466 10 6 10 chrUextra 23253436 23254089 -5750567 + LSU-rRNA_Dme rRNA rRNA 1085 1591 -2309 1 762 1966 232 29 20 chrUextra 23254195 23254840 -5749816 - G_DM LINE Jockey -536 1506 862 1 762 830 36 0 9 chrUextra 23254942 23255053 -5749603 - NTS_DM Other Other -93 147 38 1 762 907 9 0 27 chrUextra 23255053 23255165 -5749491 - NTS_DM Other Other -107 133 25 1 762 1304 18 0 6 chrUextra 23255217 23255382 -5749274 - NTS_DM Other Other -39 201 38 1 762 888 18 0 27 chrUextra 23255382 23255494 -5749162 - NTS_DM Other Other -107 133 25 1 762 22 56 0 0 chrUextra 23255520 23255556 -5749100 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 5325 29 1 0 chrUextra 23256450 23257101 -5747555 + MDG1_I LTR Gypsy 4930 5581 -1015 1 762 5598 18 28 0 chrUextra 23257201 23257854 -5746802 + R1_DM LINE R1 1843 2513 -2843 1 762 309 51 0 0 chrUextra 23258447 23258486 -5746170 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 762 4989 67 3 3 chrUextra 23258717 23259360 -5745296 + R1_DM LINE R1 1 643 -4713 1 762 1523 20 19 19 chrUextra 23259463 23259670 -5744986 + NTS_DM Other Other 34 240 0 1 762 1813 21 17 17 chrUextra 23259670 23259910 -5744746 + NTS_DM Other Other 1 240 0 1 762 1731 10 0 0 chrUextra 23259910 23260113 -5744543 + NTS_DM Other Other 1 203 -37 1 762 3216 165 9 8 chrUextra 23260213 23260862 -5743794 + SAR_DM Satellite Satellite 388 1037 -435 1 762 21 95 0 0 chrUextra 23261190 23261253 -5743403 + AT_rich Low_complexity Low_complexity 1 63 0 1 762 2752 0 6 71 chrUextra 23261265 23261619 -5743037 + LSU-rRNA_Dme rRNA rRNA 1 331 -3569 1 762 635 127 17 8 chrUextra 23261719 23261838 -5742818 - ARS406_DM Unknown Unknown -232 121 2 1 762 2809 177 16 13 chrUextra 23261742 23262372 -5742284 + SAR_DM Satellite Satellite 192 823 -649 1 762 23 0 0 0 chrUextra 23262558 23262581 -5742075 + AT_rich Low_complexity Low_complexity 1 23 0 1 762 5860 0 0 1 chrUextra 23263225 23263878 -5740778 + FW_DM LINE Jockey 3891 4542 -150 1 762 519 175 394 61 chrUextra 23263984 23264248 -5740408 + TART LINE telomeric 10140 10491 -3986 1 762 34 24 0 0 chrUextra 23264259 23264300 -5740356 + AT_rich Low_complexity Low_complexity 1 41 0 1 762 2566 3 0 3 chrUextra 23265088 23265384 -5739272 + IDEFIX_I LTR Gypsy 1 295 -5333 1 762 2969 167 12 11 chrUextra 23265495 23266137 -5738519 + SAR_DM Satellite Satellite 326 968 -504 1 762 4274 0 2 0 chrUextra 23266990 23267456 -5737200 + SSU-rRNA_Dme rRNA rRNA 1529 1995 0 1 762 21 89 0 0 chrUextra 23267475 23267531 -5737125 + AT_rich Low_complexity Low_complexity 1 56 0 1 762 902 18 0 0 chrUextra 23267743 23267852 -5736804 + ROO_I LTR Pao 5812 5920 -2336 1 762 4732 6 22 0 chrUextra 23267849 23268396 -5736260 + ROO_I LTR Pao 7472 8030 -226 1 762 2747 161 14 16 chrUextra 23268496 23269149 -5735507 + BATUMI_I LTR Pao 4210 4860 -3054 1 762 974 55 6 21 chrUextra 23269249 23269902 -5734754 - RSP Satellite Satellite -35 643 1 1 762 2968 169 19 11 chrUextra 23270005 23270655 -5734001 - SAR_DM Satellite Satellite -581 891 237 1 762 4523 57 1 57 chrUextra 23270755 23271408 -5733248 + BATUMI_I LTR Pao 2477 3093 -4870 1 762 4146 38 14 0 chrUextra 23271508 23272014 -5732642 - PROTOP DNA P -3967 513 1 1 762 2871 195 8 9 chrUextra 23272262 23272914 -5731742 - SAR_DM Satellite Satellite -610 862 212 1 762 3287 101 124 41 chrUextra 23273014 23273667 -5730989 + BATUMI_I LTR Pao 798 1504 -6459 1 762 5351 27 11 0 chrUextra 23273768 23274400 -5730256 + R1_DM LINE R1 4428 5066 -290 1 762 2743 19 1 24 chrUextra 23274520 23275173 -5729483 + HETRP_DM Satellite Satellite 1 638 -1284 1 762 5335 3 5 5 chrUextra 23275273 23275886 -5728770 + LSU-rRNA_Dme rRNA rRNA 1176 1788 -2112 1 762 5766 14 1 0 chrUextra 23276026 23276679 -5727977 + Gypsy4_I LTR Gypsy 601 1254 -5034 1 762 3358 33 0 0 chrUextra 23276781 23277173 -5727483 + DIVER_I LTR Pao 5252 5643 0 1 762 1261 107 0 97 chrUextra 23277173 23277421 -5727235 + DIVER_LTR LTR Pao 1 224 0 1 762 2702 192 64 22 chrUextra 23277532 23278185 -5726471 - SAR_DM Satellite Satellite -673 680 1 1 762 2493 109 14 29 chrUextra 23278285 23278936 -5725720 + DMSAT6 Satellite Satellite 1 640 -69 1 762 5534 14 0 0 chrUextra 23279038 23279691 -5724965 + Invader2_I LTR Gypsy 3276 3928 -664 1 762 4564 116 1 0 chrUextra 23279791 23280444 -5724212 + HMSBEAGLE_I LTR Gypsy 4981 5634 -895 1 762 1613 171 100 52 chrUextra 23280544 23280963 -5723693 - TAHRE LINE telomeric -2981 7482 7044 1 762 1681 68 13 0 chrUextra 23280962 23281197 -5723459 - TAHRE LINE telomeric -12 10451 10214 1 762 2427 247 5 6 chrUextra 23281310 23281950 -5722706 - DM412 LTR Gypsy -550 6347 5709 1 762 472 229 206 27 chrUextra 23282822 23283114 -5721542 + MAX_I LTR Pao 820 1163 -6751 1 762 868 104 218 19 chrUextra 23283115 23283331 -5721325 + MAX_I LTR Pao 939 1197 -6717 1 762 5887 1 3 0 chrUextra 23283558 23284209 -5720447 - LSU-rRNA_Dme rRNA rRNA -654 3246 2594 1 762 3458 197 0 1 chrUextra 23284312 23284962 -5719694 + ROVER-I_DM LTR Gypsy 2324 2972 -3612 1 762 5929 1 0 1 chrUextra 23285062 23285715 -5718941 + LSU-rRNA_Dme rRNA rRNA 2556 3207 -693 1 762 2798 47 3 0 chrUextra 23285815 23286179 -5718477 + I_DM LINE I 822 1186 -5045 1 762 630 158 350 46 chrUextra 23286175 23286415 -5718241 + ROVER-LTR_DM LTR Gypsy 55 367 0 1 762 3831 20 0 0 chrUextra 23286568 23287013 -5717643 + FW_DM LINE Jockey 4235 4679 -13 1 762 793 269 9 9 chrUextra 23287007 23287221 -5717435 - GTWIN_I LTR Gypsy -2186 4235 4022 1 762 4313 59 2 21 chrUextra 23287321 23287890 -5716766 + CIRCE LINE Composite 2278 2835 -3521 1 762 632 61 0 0 chrUextra 23287892 23287974 -5716682 + CIRCE LINE Composite 2961 3042 -3314 1 762 1363 49 0 0 chrUextra 23288827 23288990 -5715666 - R1_DM LINE R1 -3792 1564 1402 1 762 3986 54 4 2 chrUextra 23288981 23289480 -5715176 - R1_DM LINE R1 -3897 1459 960 1 762 2591 163 24 18 chrUextra 23290333 23290938 -5713718 - TART LINE telomeric -5046 9431 8928 1 762 40 21 0 0 chrUextra 23291094 23291141 -5713515 + AT_rich Low_complexity Low_complexity 1 47 0 1 762 799 21 0 0 chrUextra 23291644 23291737 -5712919 + Gypsy4_I LTR Gypsy 374 466 -5822 1 762 5913 0 1 3 chrUextra 23291839 23292492 -5712164 + LSU-rRNA_Dme rRNA rRNA 3137 3788 -112 1 762 681 30 0 10 chrUextra 23293345 23293447 -5711209 + NTS_DM Other Other 101 201 -39 1 762 907 9 0 27 chrUextra 23293499 23293611 -5711045 + NTS_DM Other Other 25 133 -107 1 762 1304 18 0 6 chrUextra 23293611 23293776 -5710880 + NTS_DM Other Other 38 201 -39 1 762 886 18 0 27 chrUextra 23293828 23293940 -5710716 + NTS_DM Other Other 25 133 -107 1 762 524 0 0 0 chrUextra 23293940 23293998 -5710658 + NTS_DM Other Other 38 95 -145 1 762 1578 21 0 0 chrUextra 23294106 23294392 -5710264 + (TTCTC)n Simple_repeat Simple_repeat 1 286 0 1 762 549 0 0 0 chrUextra 23294416 23294477 -5710179 + (GAGAA)n Simple_repeat Simple_repeat 1 61 0 1 762 4586 2 0 0 chrUextra 23294851 23295384 -5709272 + STALKER4_I LTR Gypsy 3142 3674 -2856 1 762 964 17 0 25 chrUextra 23295384 23295504 -5709152 - BATUMI_I LTR Pao -679 7284 7168 1 762 2225 11 0 11 chrUextra 23295604 23295873 -5708783 + DOC5_DM LINE Jockey 4386 4651 -31 1 762 242 0 61 0 chrUextra 23295875 23295908 -5708748 + (TATAA)n Simple_repeat Simple_repeat 2 36 0 1 762 5777 8 3 3 chrUextra 23296357 23297010 -5707646 - TART_B1 LINE telomeric -1964 8690 8038 1 762 1183 184 11 14 chrUextra 23297113 23297763 -5706893 + SAR_DM Satellite Satellite 1 648 -645 1 762 5670 28 0 0 chrUextra 23297863 23298516 -5706140 + DIVER_I LTR Pao 1151 1803 -3840 1 762 514 119 36 0 chrUextra 23298852 23298936 -5705720 - NTS_DM Other Other -150 90 4 1 762 1325 6 0 24 chrUextra 23299046 23299212 -5705444 - NTS_DM Other Other -78 162 1 1 762 352 0 70 53 chrUextra 23299212 23299269 -5705387 - NTS_DM Other Other 0 240 183 1 762 334 221 0 11 chrUextra 23299372 23299459 -5705197 + DMLTR5 LTR Gypsy 181 266 0 1 762 372 49 65 16 chrUextra 23299458 23299520 -5705136 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 762 277 106 0 21 chrUextra 23299542 23299590 -5705066 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 762 5729 0 0 1 chrUextra 23300122 23300775 -5703881 + ROO_I LTR Pao 1588 2239 -6017 1 762 2975 178 12 11 chrUextra 23300875 23301528 -5703128 + SAR_DM Satellite Satellite 304 957 -515 1 762 2838 196 17 24 chrUextra 23301629 23302281 -5702375 - SAR_DM Satellite Satellite -614 647 1 1 762 3139 180 8 6 chrUextra 23302381 23303034 -5701622 - SAR_DM Satellite Satellite -550 922 269 1 762 5439 5 8 0 chrUextra 23303171 23303787 -5700869 + QUASIMODO_LTR LTR Gypsy 1 621 -37 1 762 2611 193 14 17 chrUextra 23303892 23304539 -5700117 + SAR_DM Satellite Satellite 321 965 -507 1 762 3057 262 48 29 chrUextra 23304641 23304675 -5699981 + SAR_DM Satellite Satellite 1 37 -1932 1 762 890 60 0 0 chrUextra 23304675 23304792 -5699864 - ARS406_DM Unknown Unknown -164 189 73 1 762 3057 262 48 29 chrUextra 23304792 23306045 -5698611 + SAR_DM Satellite Satellite 38 1430 -539 1 762 3062 181 6 9 chrUextra 23306146 23306799 -5697857 - SAR_DM Satellite Satellite -610 862 212 1 762 974 287 51 30 chrUextra 23306901 23307494 -5697162 + SAR_DM Satellite Satellite 228 832 -640 1 762 385 264 16 22 chrUextra 23307348 23307530 -5697126 - XDMR_DM Unknown Unknown -1 359 179 1 762 5734 1 0 1 chrUextra 23307652 23308305 -5696351 + LSU-rRNA_Dme rRNA rRNA 459 1110 -2790 1 762 1336 32 0 0 chrUextra 23308405 23308562 -5696094 - IDEFIX_I LTR Gypsy -4199 1429 1273 1 762 3990 39 25 0 chrUextra 23308549 23309058 -5695598 - IDEFIX_I LTR Gypsy -4791 837 316 1 762 2808 175 11 25 chrUextra 23309158 23309802 -5694854 + SAR_DM Satellite Satellite 484 1118 -354 1 762 293 172 16 0 chrUextra 23309747 23309811 -5694845 - XDMR Unknown Unknown 0 361 297 1 762 5427 32 0 0 chrUextra 23309911 23310564 -5694092 + ROO_I LTR Pao 1866 2518 -5738 1 762 1304 18 0 6 chrUextra 23310698 23310863 -5693793 - NTS_DM Other Other -39 201 38 1 762 907 9 0 27 chrUextra 23310863 23310975 -5693681 - NTS_DM Other Other -107 133 25 1 762 1274 18 0 12 chrUextra 23311027 23311193 -5693463 - NTS_DM Other Other -39 201 38 1 762 899 28 0 0 chrUextra 23311193 23311301 -5693355 - NTS_DM Other Other -107 133 26 1 762 277 106 0 21 chrUextra 23311439 23311487 -5693169 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 762 372 49 65 16 chrUextra 23311509 23311571 -5693085 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 762 939 173 102 15 chrUextra 23311570 23311775 -5692881 - DMLTR5 LTR Gypsy 0 266 44 1 762 5856 0 1 5 chrUextra 23312170 23312823 -5691833 + SSU-rRNA_Dme rRNA rRNA 1030 1680 -315 1 762 4560 122 0 0 chrUextra 23312923 23313576 -5691080 - HMSBEAGLE_I LTR Gypsy -1523 5006 4354 1 762 557 0 0 0 chrUextra 23313676 23313738 -5690918 + ROVER-I_DM LTR Gypsy 6523 6584 0 1 762 501 68 0 39 chrUextra 23313737 23313814 -5690842 + ROVER-LTR_DM LTR Gypsy 1 74 -293 1 762 1362 58 5 50 chrUextra 23313945 23314145 -5690511 + ROVER-LTR_DM LTR Gypsy 177 367 0 1 762 1654 5 0 0 chrUextra 23314145 23314329 -5690327 - STALKER4_LTR LTR Gypsy -145 257 74 1 762 603 204 75 0 chrUextra 23314553 23314700 -5689956 + HETRP_DM Satellite Satellite 1518 1675 -197 1 762 770 187 19 19 chrUextra 23314840 23314998 -5689658 + HETRP_DM Satellite Satellite 1518 1675 -197 1 762 411 132 13 13 chrUextra 23315005 23315082 -5689574 - HOBO DNA hAT 0 3016 2940 1 762 5156 0 99 0 chrUextra 23315182 23315835 -5688821 - ROO_I LTR Pao -7112 1144 427 1 762 1763 5 13 22 chrUextra 23315938 23316164 -5688492 - NTS_DM Other Other -16 224 1 1 762 1813 21 17 17 chrUextra 23316164 23316404 -5688252 - NTS_DM Other Other 0 240 1 1 762 1290 17 22 22 chrUextra 23316404 23316588 -5688068 - NTS_DM Other Other 0 240 57 1 762 1924 88 22 60 chrUextra 23316711 23317025 -5687631 - Gypsy6A_LTR LTR Gypsy -118 302 1 1 762 940 326 25 3 chrUextra 23317027 23317341 -5687315 - Gypsy6_I LTR Gypsy 0 7012 6692 1 762 3260 157 14 9 chrUextra 23317443 23318092 -5686564 + SAR_DM Satellite Satellite 282 933 -539 1 762 3069 175 9 9 chrUextra 23318194 23318847 -5685809 + SAR_DM Satellite Satellite 422 1074 -398 1 762 3159 167 11 9 chrUextra 23318947 23319594 -5685062 - SAR_DM Satellite Satellite -426 1046 399 1 762 5769 15 0 0 chrUextra 23319700 23320353 -5684303 - R1_DM LINE R1 -789 4567 3915 1 762 4988 16 0 0 chrUextra 23320453 23321015 -5683641 - DMRT1B LINE R1 -4621 562 1 1 762 3105 165 12 9 chrUextra 23321206 23321859 -5682797 + SAR_DM Satellite Satellite 388 1042 -430 1 762 4519 30 18 32 chrUextra 23321959 23322612 -5682044 - BATUMI_I LTR Pao -7219 744 101 1 762 1033 181 32 25 chrUextra 23322712 23323364 -5681292 - SAR_DM Satellite Satellite -723 657 1 1 762 5899 3 1 0 chrUextra 23323465 23324118 -5680538 + FW_DM LINE Jockey 3354 4007 -685 1 762 2304 196 88 25 chrUextra 23324223 23324871 -5679785 - SAR_DM Satellite Satellite -216 1256 568 1 762 1390 171 21 65 chrUextra 23325746 23326071 -5678585 + HETA LINE telomeric 5437 5747 -334 1 762 1576 109 104 16 chrUextra 23326059 23326377 -5678279 + TART LINE telomeric 9296 9641 -4836 1 762 1292 12 0 12 chrUextra 23326516 23326682 -5677974 - NTS_DM Other Other -39 201 38 1 762 907 9 0 27 chrUextra 23326682 23326794 -5677862 - NTS_DM Other Other -107 133 25 1 762 1304 18 0 6 chrUextra 23326846 23327011 -5677645 - NTS_DM Other Other -39 201 38 1 762 877 9 0 35 chrUextra 23327011 23327124 -5677532 - NTS_DM Other Other -107 133 25 1 762 2045 167 13 6 chrUextra 23327230 23327883 -5676773 + SAR_DM Satellite Satellite 1 657 -677 1 762 271 270 14 0 chrUextra 23327986 23328060 -5676596 - DIVER2_I LTR Pao -3626 521 447 1 762 5813 9 0 0 chrUextra 23328736 23329389 -5675267 - R1_DM LINE R1 -1896 3460 2808 1 762 643 0 0 0 chrUextra 23329489 23329566 -5675090 + NTS_DM Other Other 57 133 -107 1 762 1274 18 0 12 chrUextra 23329566 23329732 -5674924 + NTS_DM Other Other 38 201 -39 1 762 907 9 0 27 chrUextra 23329784 23329896 -5674760 + NTS_DM Other Other 25 133 -107 1 762 1503 15 20 20 chrUextra 23329896 23330099 -5674557 + NTS_DM Other Other 38 240 0 1 762 375 23 0 0 chrUextra 23330099 23330142 -5674514 + NTS_DM Other Other 1 43 -197 1 95 5590 2 2 0 chrUextra 23330242 23330860 -5673796 - LSU-rRNA_Dme rRNA rRNA -1494 2406 1788 1 763 989 68 6 18 chrUextra 23330996 23331648 -5673008 - RSP Satellite Satellite -45 644 1 1 763 3356 0 8 5 chrUextra 23331748 23332136 -5672520 + LSU-rRNA_Dme rRNA rRNA 1400 1788 -2112 1 763 2030 0 0 0 chrUextra 23332180 23332401 -5672255 + LSU-rRNA_Dme rRNA rRNA 1788 2008 -1892 1 763 441 0 0 0 chrUextra 23333105 23333154 -5671502 + (TTCTC)n Simple_repeat Simple_repeat 2 50 0 1 763 2562 186 9 23 chrUextra 23334007 23334658 -5669998 + SAR_DM Satellite Satellite 472 1113 -359 1 763 1607 10 0 30 chrUextra 23334760 23334959 -5669697 - CIRCE LINE Composite -4276 2080 1888 1 763 470 296 45 45 chrUextra 23334761 23335026 -5669630 - Gypsy12_I LTR Gypsy -1447 4099 3835 1 763 3036 16 0 29 chrUextra 23335035 23335413 -5669243 - CIRCE LINE Composite -4474 1882 1516 1 763 3350 26 7 0 chrUextra 23335513 23335930 -5668726 - R1_DM LINE R1 -343 5013 4594 1 763 5243 17 1 6 chrUextra 23336266 23336919 -5667737 + STALKER4_I LTR Gypsy 4262 4911 -1619 1 763 1719 78 85 0 chrUextra 23337019 23337277 -5667379 - MDG1_LTR LTR Gypsy -69 373 94 1 763 372 88 0 0 chrUextra 23337279 23337336 -5667320 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 763 849 86 56 21 chrUextra 23337364 23337507 -5667149 + DM176_I LTR Gypsy 2360 2507 -3913 1 763 969 127 25 0 chrUextra 23337514 23337672 -5666984 + DM176_I LTR Gypsy 2641 2802 -3618 1 763 3869 19 0 0 chrUextra 23337772 23338234 -5666422 + DOC2_DM LINE Jockey 4029 4490 -303 1 763 641 0 0 40 chrUextra 23338234 23338333 -5666323 + DOC2_DM LINE Jockey 4698 4792 -1 1 763 857 18 0 27 chrUextra 23338527 23338639 -5666017 + NTS_DM Other Other 25 133 -107 1 763 1408 20 20 20 chrUextra 23338639 23338842 -5665814 + NTS_DM Other Other 38 240 0 1 763 1759 17 17 17 chrUextra 23338842 23339082 -5665574 + NTS_DM Other Other 1 240 0 1 763 800 21 0 0 chrUextra 23339082 23339177 -5665479 + NTS_DM Other Other 1 95 -145 1 763 4514 48 8 0 chrUextra 23339277 23339887 -5664769 - MDG1_I LTR Gypsy -4851 1745 1131 1 763 566 211 29 95 chrUextra 23340787 23340997 -5663659 - TAHRE LINE telomeric -3029 7434 7239 1 763 2318 100 21 34 chrUextra 23340997 23341433 -5663223 - TART LINE telomeric -4460 10017 9588 1 763 353 107 0 0 chrUextra 23341533 23341589 -5663067 + ARS406_DM Unknown Unknown 78 133 -220 1 763 2070 206 34 10 chrUextra 23341588 23342183 -5662473 - SAR_DM Satellite Satellite -668 804 196 1 763 3369 273 37 18 chrUextra 23342288 23343660 -5660996 - SAR_DM Satellite Satellite -242 1398 1 1 763 768 98 0 0 chrUextra 23343567 23343689 -5660967 + ARS406_DM Unknown Unknown 1 122 -231 1 763 3372 0 3 0 chrUextra 23343789 23344174 -5660482 + SSU-rRNA_Dme rRNA rRNA 1610 1995 0 1 763 3988 84 2 3 chrUextra 23344541 23345172 -5659484 + BATUMI_I LTR Pao 5924 6796 -1118 1 763 1007 39 0 8 chrUextra 23345065 23345193 -5659463 - BATUMI_I LTR Pao -962 7001 6875 1 763 2904 81 0 2 chrUextra 23345293 23345689 -5658967 + Gypsy12_I LTR Gypsy 5152 5546 0 1 763 1214 175 19 23 chrUextra 23345688 23345945 -5658711 + Gypsy12_LTR LTR Gypsy 1 256 -2080 1 763 2788 187 8 6 chrUextra 23346050 23346697 -5657959 - SAR_DM Satellite Satellite -569 903 256 1 763 507 306 75 44 chrUextra 23346818 23347406 -5657250 - MDG1_I LTR Gypsy -3817 2779 2174 1 763 1630 163 9 8 chrUextra 23347552 23348201 -5656455 + SAR_DM Satellite Satellite 1 649 -755 1 763 2797 194 15 19 chrUextra 23348305 23348946 -5655710 - SAR_DM Satellite Satellite -620 638 1 1 763 2507 133 68 42 chrUextra 23349053 23349705 -5654951 + STALKER4_I LTR Gypsy 456 1180 -5350 1 763 870 9 0 27 chrUextra 23349812 23349924 -5654732 + NTS_DM Other Other 25 133 -107 1 763 1252 18 0 6 chrUextra 23349924 23350089 -5654567 + NTS_DM Other Other 38 201 -39 1 763 870 9 0 27 chrUextra 23350141 23350253 -5654403 + NTS_DM Other Other 25 133 -107 1 763 1222 18 0 12 chrUextra 23350253 23350419 -5654237 + NTS_DM Other Other 38 201 -39 1 763 4206 35 1 51 chrUextra 23350557 23351209 -5653447 - DM176_I LTR Gypsy -5535 885 266 1 763 34 24 0 0 chrUextra 23352152 23352193 -5652463 + AT_rich Low_complexity Low_complexity 1 41 0 1 763 1181 181 249 46 chrUextra 23352206 23352709 -5651947 - TART LINE telomeric -3988 10489 9885 1 763 1559 25 0 3 chrUextra 23352814 23353140 -5651516 + (TTCTC)n Simple_repeat Simple_repeat 1 324 0 1 763 1197 73 0 4 chrUextra 23353153 23353438 -5651218 + (ATAAG)n Simple_repeat Simple_repeat 1 283 0 1 763 5492 9 0 1 chrUextra 23353565 23354217 -5650439 - R1_DM LINE R1 -104 5252 4602 1 763 822 86 0 0 chrUextra 23354317 23354433 -5650223 + (TATAA)n Simple_repeat Simple_repeat 5 120 0 1 763 1356 62 0 0 chrUextra 23354436 23354615 -5650041 + (CAATA)n Simple_repeat Simple_repeat 2 180 0 1 763 1620 14 0 3 chrUextra 23354615 23354969 -5649687 + (TATAA)n Simple_repeat Simple_repeat 1 353 0 1 763 5333 20 1 1 chrUextra 23355821 23356473 -5648183 + R1_DM LINE R1 3483 4134 -1222 1 763 232 223 19 46 chrUextra 23356596 23356704 -5647952 - Gypsy12A_LTR LTR Gypsy -595 1685 1581 1 763 1221 176 88 24 chrUextra 23356762 23357093 -5647563 - Gypsy12_LTR LTR Gypsy -827 1509 1158 1 763 4960 52 6 1 chrUextra 23357325 23357977 -5646679 + R1_DM LINE R1 930 1584 -3772 1 763 3043 0 0 0 chrUextra 23358077 23358422 -5646234 + ROO_LTR LTR Pao 84 428 0 1 763 451 17 0 91 chrUextra 23358422 23358484 -5646172 - CIRCE LINE Composite -4413 1943 1888 1 763 282 287 30 30 chrUextra 23358484 23358551 -5646105 - Gypsy12_I LTR Gypsy -1579 3967 3835 1 763 1353 24 6 0 chrUextra 23358560 23358729 -5645927 - CIRCE LINE Composite -4474 1882 1713 1 763 2980 170 9 6 chrUextra 23358829 23359481 -5645175 - SAR_DM Satellite Satellite -569 903 250 1 763 5604 9 0 0 chrUextra 23359581 23360233 -5644423 + SSU-rRNA_Dme rRNA rRNA 521 1172 -823 1 763 5487 17 0 0 chrUextra 23360333 23360985 -5643671 + R1_DM LINE R1 4007 4658 -698 1 763 5333 25 0 0 chrUextra 23361085 23361737 -5642919 - R1_DM LINE R1 -2239 3117 2466 1 763 279 125 233 0 chrUextra 23361842 23362082 -5642574 + (CTAAA)n Simple_repeat Simple_repeat 1 295 0 1 763 248 41 82 0 chrUextra 23362589 23362638 -5642018 - SAR_DM Satellite Satellite -684 788 736 1 763 2030 35 3 31 chrUextra 23362633 23362924 -5641732 + BATUMI_I LTR Pao 7002 7284 -679 1 763 1650 101 108 25 chrUextra 23362924 23363240 -5641416 + BATUMI_I LTR Pao 1 342 -7621 1 763 5356 31 1 0 chrUextra 23363341 23363993 -5640663 - DMCR1A LINE CR1 -3255 1215 563 1 763 1150 32 103 0 chrUextra 23364588 23364744 -5639912 + PROTOP_B DNA P 1 172 -981 1 763 1655 10 0 0 chrUextra 23364845 23365039 -5639617 - R1_DM LINE R1 -2827 2529 2336 1 763 3933 9 0 0 chrUextra 23365039 23365497 -5639159 + R1_DM LINE R1 4212 4669 -687 1 763 305 279 107 89 chrUextra 23365845 23366125 -5638531 + Invader1_LTR LTR Gypsy 84 368 -55 1 763 5153 22 1 14 chrUextra 23367853 23368505 -5636151 + ROO_I LTR Pao 1836 2479 -5777 1 763 2820 180 11 6 chrUextra 23368608 23369251 -5635405 - SAR_DM Satellite Satellite -581 891 246 1 763 1989 285 9 9 chrUextra 23369365 23370009 -5634647 + Gypsy_I LTR Gypsy 2375 3018 -3489 1 763 946 68 6 18 chrUextra 23370112 23370759 -5633897 + RSP Satellite Satellite 1 639 0 1 763 2901 174 8 9 chrUextra 23370861 23371506 -5633150 + SAR_DM Satellite Satellite 404 1047 -425 1 763 5158 23 21 6 chrUextra 23371613 23372265 -5632391 - FW_DM LINE Jockey -93 4599 3938 1 763 5058 3 0 40 chrUextra 23372365 23373017 -5631639 - LSU-rRNA_Dme rRNA rRNA -3177 723 98 1 763 5628 0 0 0 chrUextra 23373117 23373769 -5630887 + DOC LINE Jockey 1012 1663 -3062 1 763 3300 100 49 31 chrUextra 23373870 23374521 -5630135 + STALKER4_I LTR Gypsy 643 1305 -5225 1 763 1945 13 0 0 chrUextra 23374621 23374849 -5629807 + R1_DM LINE R1 5129 5356 0 1 763 2817 62 5 5 chrUextra 23374882 23375273 -5629383 + R1_DM LINE R1 1 391 -4965 1 763 5314 26 0 0 chrUextra 23375373 23376025 -5628631 - R1_DM LINE R1 -2571 2785 2134 1 763 2836 169 39 8 chrUextra 23376137 23376777 -5627879 + SAR_DM Satellite Satellite 369 1028 -444 1 763 5288 34 0 0 chrUextra 23376881 23377524 -5627132 + BATUMI_I LTR Pao 5077 5719 -2244 1 763 1237 16 27 21 chrUextra 23377631 23377817 -5626839 + NTS_DM Other Other 54 240 0 1 763 1756 17 17 17 chrUextra 23377817 23378057 -5626599 + NTS_DM Other Other 1 240 0 1 763 1128 8 0 0 chrUextra 23378057 23378190 -5626466 + NTS_DM Other Other 1 133 -107 1 763 751 0 11 0 chrUextra 23378190 23378281 -5626375 + NTS_DM Other Other 38 129 -111 1 763 401 212 20 0 chrUextra 23378381 23378480 -5626176 + Gypsy12_LTR LTR Gypsy 312 412 -1924 1 763 292 214 0 0 chrUextra 23378542 23378598 -5626058 + Gypsy12_LTR LTR Gypsy 409 464 -1816 1 763 420 268 37 120 chrUextra 23378707 23379033 -5625623 + Gypsy12_LTR LTR Gypsy 679 977 -1359 1 763 5689 0 0 1 chrUextra 23379133 23379785 -5624871 + SSU-rRNA_Dme rRNA rRNA 323 973 -1022 1 763 5533 5 1 3 chrUextra 23379885 23380537 -5624119 - LSU-rRNA_Dme rRNA rRNA -2467 1433 783 1 763 5304 29 0 1 chrUextra 23380637 23381289 -5623367 + R1_DM LINE R1 1281 1931 -3425 1 763 2634 183 10 10 chrUextra 23381389 23382014 -5622642 + SAR_DM Satellite Satellite 452 1076 -396 1 763 3032 164 11 9 chrUextra 23382141 23382793 -5621863 + SAR_DM Satellite Satellite 379 1031 -441 1 763 2658 181 11 8 chrUextra 23382896 23383527 -5621129 - SAR_DM Satellite Satellite -514 958 326 1 763 5254 5 5 0 chrUextra 23383645 23384297 -5620359 + STALKER4_I LTR Gypsy 5729 6383 -147 1 763 5592 0 0 1 chrUextra 23384397 23385049 -5619607 + R1_DM LINE R1 1584 2234 -3122 1 763 2486 165 15 23 chrUextra 23385149 23385728 -5618928 - SAR_DM Satellite Satellite -1073 574 1 1 763 4751 0 2 2 chrUextra 23385901 23386448 -5618208 + SSU-rRNA_Dme rRNA rRNA 1449 1995 0 1 763 21 89 0 0 chrUextra 23386467 23386523 -5618133 + AT_rich Low_complexity Low_complexity 1 56 0 1 763 4693 28 3 51 chrUextra 23386653 23387305 -5617351 - BATUMI_I LTR Pao -5247 2716 2096 1 763 5369 5 18 11 chrUextra 23387405 23388056 -5616600 - DM176_I LTR Gypsy -3295 3125 2470 1 763 2833 174 13 14 chrUextra 23388183 23388803 -5615853 - SAR_DM Satellite Satellite -396 1076 458 1 763 2533 93 20 12 chrUextra 23388909 23389561 -5615095 + DMSAT6 Satellite Satellite 1 656 -37 1 763 27 29 0 0 chrUextra 23389986 23390020 -5614636 + AT_rich Low_complexity Low_complexity 1 34 0 1 763 265 91 0 0 chrUextra 23390259 23390292 -5614364 + Baggins1 LINE LOA 4727 4759 -694 1 763 4845 61 6 11 chrUextra 23390429 23391060 -5613596 + R1_DM LINE R1 1 628 -4728 1 763 685 0 0 0 chrUextra 23391165 23391239 -5613417 - NTS_DM Other Other -129 111 38 1 763 898 9 9 27 chrUextra 23391239 23391350 -5613306 - NTS_DM Other Other -107 133 25 1 763 22 56 0 0 chrUextra 23391377 23391413 -5613243 + AT_rich Low_complexity Low_complexity 1 36 0 1 763 278 176 0 19 chrUextra 23391426 23391478 -5613178 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 268 196 0 19 chrUextra 23391509 23391561 -5613095 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 268 196 0 19 chrUextra 23391601 23391653 -5613003 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 268 196 0 19 chrUextra 23391693 23391745 -5612911 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 433 165 13 0 chrUextra 23391931 23392010 -5612646 - ROVER-I_DM LTR Gypsy -6504 80 1 1 763 1899 88 68 66 chrUextra 23392010 23392376 -5612280 - ROVER-LTR_DM LTR Gypsy 0 367 1 1 763 803 175 98 21 chrUextra 23392376 23392569 -5612087 - ROVER-I_DM LTR Gypsy 0 6584 6377 1 763 5989 0 0 3 chrUextra 23392669 23393321 -5611335 + DOC LINE Jockey 3166 3815 -910 1 763 5781 21 0 0 chrUextra 23393421 23394073 -5610583 - R1_DM LINE R1 -2741 2615 1964 1 763 2900 187 12 14 chrUextra 23394184 23394825 -5609831 + SAR_DM Satellite Satellite 278 917 -555 1 763 2034 45 5 6 chrUextra 23394925 23395345 -5609311 - ACCORD2_I LTR Gypsy -6959 253 1 1 763 1848 9 9 18 chrUextra 23395345 23395562 -5609094 - ACCORD2_LTR LTR Gypsy 0 215 1 1 763 3057 188 9 14 chrUextra 23395677 23396329 -5608327 - SAR_DM Satellite Satellite -557 915 267 1 763 3241 171 6 12 chrUextra 23396439 23397080 -5607576 - SAR_DM Satellite Satellite -411 1061 425 1 763 3231 165 12 11 chrUextra 23397946 23398585 -5606071 + SAR_DM Satellite Satellite 369 1008 -464 1 763 4539 74 40 6 chrUextra 23398685 23399337 -5605319 + TART LINE telomeric 436 1109 -13368 1 763 5777 19 0 3 chrUextra 23399437 23400089 -5604567 - ROO_I LTR Pao -574 7682 7033 1 763 3190 172 9 9 chrUextra 23400189 23400828 -5603828 + SAR_DM Satellite Satellite 438 1076 -396 1 763 5653 20 1 3 chrUextra 23400941 23401593 -5603063 - DMRT1B LINE R1 -1642 3541 2891 1 763 4463 85 100 0 chrUextra 23401695 23402345 -5602311 + TART_B1 LINE telomeric 2414 3128 -7526 1 763 5502 21 11 1 chrUextra 23402445 23403097 -5601559 + NINJA_I LTR Pao 481 1138 -4873 1 763 5786 12 0 5 chrUextra 23403197 23403849 -5600807 - BS LINE Jockey -3378 1748 1100 1 763 3282 173 8 8 chrUextra 23404701 23405353 -5599303 + SAR_DM Satellite Satellite 379 1030 -442 1 763 1124 96 60 0 chrUextra 23405453 23405620 -5599036 + IDEFIX_I LTR Gypsy 4894 5070 -558 1 763 3889 28 2 4 chrUextra 23405619 23406083 -5598573 + IDEFIX_LTR LTR Gypsy 132 594 0 1 763 1724 170 8 6 chrUextra 23406206 23406854 -5597802 - SAR_DM Satellite Satellite -645 649 1 1 763 3158 168 37 12 chrUextra 23406961 23407608 -5597048 + SAR_DM Satellite Satellite 399 1061 -411 1 763 1587 15 0 22 chrUextra 23407709 23408064 -5596592 + (GAGAA)n Simple_repeat Simple_repeat 1 347 0 1 763 1465 62 36 0 chrUextra 23408461 23408654 -5596002 - MDG1_I LTR Gypsy -996 5600 5401 1 763 3421 55 26 4 chrUextra 23408658 23409113 -5595543 - DM297_I LTR Gypsy -1816 4351 3887 1 763 5595 31 0 0 chrUextra 23409213 23409865 -5594791 + MDG1_I LTR Gypsy 1794 2445 -4151 1 763 5133 65 0 1 chrUextra 23409965 23410617 -5594039 - STALKER4_I LTR Gypsy -672 5858 5208 1 763 5867 3 2 0 chrUextra 23410717 23411349 -5593307 + LSU-rRNA_Dme rRNA rRNA 3266 3898 -2 1 763 3240 173 11 8 chrUextra 23411474 23412116 -5592540 - SAR_DM Satellite Satellite -583 889 246 1 763 269 133 0 0 chrUextra 23412076 23412121 -5592535 + ARS406_DM Unknown Unknown 1 45 -308 1 763 1363 22 21 21 chrUextra 23412221 23412408 -5592248 + NTS_DM Other Other 54 240 0 1 763 1995 4 17 13 chrUextra 23412408 23412647 -5592009 + NTS_DM Other Other 1 240 0 1 763 1867 0 13 18 chrUextra 23412647 23412872 -5591784 + NTS_DM Other Other 1 224 -16 1 763 5721 14 0 15 chrUextra 23412973 23413625 -5591031 - CIRCE LINE Composite -2127 4229 3588 1 763 2733 77 15 17 chrUextra 23413726 23414377 -5590279 + DMSAT6 Satellite Satellite 1 650 0 1 763 5759 11 1 1 chrUextra 23414477 23415129 -5589527 + R1_DM LINE R1 3496 4147 -1209 1 763 5916 0 0 1 chrUextra 23415229 23415881 -5588775 - R1_DM LINE R1 -2007 3349 2699 1 763 1539 0 0 0 chrUextra 23415981 23416152 -5588504 + (GAGAA)n Simple_repeat Simple_repeat 2 172 0 1 763 456 104 0 0 chrUextra 23416733 23416800 -5587856 + (CATA)n Simple_repeat Simple_repeat 1 67 0 1 763 2117 16 8 12 chrUextra 23416800 23417056 -5587600 + BLASTOPIA_LTR LTR Gypsy 2 256 -19 1 763 2927 0 3 0 chrUextra 23417062 23417385 -5587271 + BLASTOPIA_I LTR Gypsy 1 324 -4157 1 763 2408 100 6 37 chrUextra 23417485 23418136 -5586520 - DMSAT6 Satellite Satellite -131 631 1 1 763 2767 164 14 56 chrUextra 23418237 23418863 -5585793 + SAR_DM Satellite Satellite 491 1090 -382 1 763 24 0 0 0 chrUextra 23419436 23419460 -5585196 + AT_rich Low_complexity Low_complexity 1 24 0 1 763 3338 25 2 0 chrUextra 23419741 23420136 -5584520 - Invader2_I LTR Gypsy -434 4158 3763 1 763 2086 35 0 0 chrUextra 23420134 23420393 -5584263 - Invader2_I LTR Gypsy -1021 3571 3313 1 763 3149 160 18 20 chrUextra 23420493 23421145 -5583511 - SAR_DM Satellite Satellite -489 983 333 1 763 5810 5 0 17 chrUextra 23421245 23421897 -5582759 - QUASIMODO_I LTR Gypsy -5311 749 109 1 763 4566 22 22 4 chrUextra 23421997 23422539 -5582117 - MAX_I LTR Pao -6010 1904 1353 1 763 1226 15 0 0 chrUextra 23422829 23422964 -5581692 - 5S_DM RNA RNA 0 135 1 1 763 1246 0 0 0 chrUextra 23423188 23423323 -5581333 - 5S_DM RNA RNA 0 135 1 1 763 4624 48 76 8 chrUextra 23423501 23424132 -5580524 - ACCORD2_I LTR Gypsy -4773 2439 1766 1 763 698 0 0 12 chrUextra 23424594 23424677 -5579979 + (TCTCC)n Simple_repeat Simple_repeat 2 83 0 1 763 191 0 148 0 chrUextra 23424680 23424734 -5579922 + (CTCA)n Simple_repeat Simple_repeat 3 64 0 1 763 197 52 172 20 chrUextra 23424748 23424847 -5579809 + (CTAAA)n Simple_repeat Simple_repeat 5 118 0 1 763 3995 25 143 0 chrUextra 23425006 23425522 -5579134 - PROTOP DNA P -3890 590 1 1 763 5955 6 1 0 chrUextra 23426509 23427161 -5577495 - FW_DM LINE Jockey -357 4335 3683 1 763 6022 1 0 0 chrUextra 23427261 23427913 -5576743 - FW_DM LINE Jockey -3365 1327 676 1 763 2667 75 23 21 chrUextra 23428013 23428665 -5575991 + DMSAT6 Satellite Satellite 1 652 -108 1 763 600 28 14 0 chrUextra 23428765 23428836 -5575820 + ROO_I LTR Pao 5570 5641 -2615 1 763 5335 5 0 2 chrUextra 23428833 23429417 -5575239 + ROO_I LTR Pao 6935 7517 -739 1 763 3446 46 1 14 chrUextra 23429520 23429959 -5574697 + STALKER4_LTR LTR Gypsy 1 399 -3 1 763 640 108 0 11 chrUextra 23430034 23430128 -5574528 + G3_DM LINE Jockey 1 93 -4512 1 763 5634 26 0 0 chrUextra 23430269 23430921 -5573735 + R1_DM LINE R1 2296 2947 -2409 1 763 6070 1 1 0 chrUextra 23431021 23431673 -5572983 - LSU-rRNA_Dme rRNA rRNA -550 3350 2698 1 763 5736 21 0 0 chrUextra 23431773 23432425 -5572231 + HETA LINE telomeric 2251 2902 -3179 1 763 4095 2 0 0 chrUextra 23432725 23433177 -5571479 + IDEFIX_I LTR Gypsy 1 452 -5176 1 763 933 121 0 14 chrUextra 23433277 23433420 -5571236 + Gypsy12A_LTR LTR Gypsy 1952 2092 -188 1 763 3882 2 0 0 chrUextra 23433420 23433844 -5570812 - Stalker2_LTR LTR Gypsy 0 424 1 1 763 691 0 0 0 chrUextra 23433844 23433929 -5570727 - Stalker2_I LTR Gypsy 0 7402 7318 1 763 1457 170 35 7 chrUextra 23434029 23434437 -5570219 + SAR_DM Satellite Satellite 1 419 -1043 1 763 463 82 0 0 chrUextra 23434473 23434534 -5570122 + FB4_DM DNA Tc1 2 62 -4027 1 763 632 173 37 53 chrUextra 23434492 23434681 -5569975 - FB4_DM DNA Tc1 -3276 813 628 1 763 5414 34 3 1 chrUextra 23434781 23435432 -5569224 + ZAM_I LTR Gypsy 3065 3716 -3774 1 763 2912 21 13 3 chrUextra 23435533 23435912 -5568744 + STALKER4_I LTR Gypsy 6148 6530 0 1 763 2484 11 0 0 chrUextra 23435912 23436185 -5568471 + STALKER4_LTR LTR Gypsy 1 273 -129 1 763 545 31 696 0 chrUextra 23437037 23437160 -5567496 + PROTOP_B DNA P 648 856 -297 1 763 3006 136 4 8 chrUextra 23437148 23437660 -5566996 - Jockey2 LINE Jockey -1608 1820 1419 1 763 5702 20 1 0 chrUextra 23439291 23439942 -5564714 + R1_DM LINE R1 1586 2237 -3119 1 763 845 40 0 0 chrUextra 23440042 23440143 -5564513 + TART LINE telomeric 4774 4874 -9603 1 763 3507 42 36 122 chrUextra 23440144 23440693 -5563963 + TART LINE telomeric 4554 5055 -9422 1 763 1262 27 0 0 chrUextra 23440793 23440940 -5563716 - NTS_DM Other Other -93 147 1 1 763 1558 15 20 20 chrUextra 23440940 23441143 -5563513 - NTS_DM Other Other 0 240 38 1 763 898 9 9 27 chrUextra 23441143 23441254 -5563402 - NTS_DM Other Other -107 133 25 1 763 21 57 0 0 chrUextra 23441280 23441315 -5563341 + AT_rich Low_complexity Low_complexity 1 35 0 1 763 957 31 0 8 chrUextra 23441315 23441444 -5563212 - NTS_DM Other Other -39 201 74 1 763 2006 0 17 13 chrUextra 23441556 23441795 -5562861 + NTS_DM Other Other 1 240 0 1 763 1984 13 8 8 chrUextra 23441795 23442035 -5562621 + NTS_DM Other Other 1 240 0 1 763 1308 26 6 0 chrUextra 23442035 23442191 -5562465 + NTS_DM Other Other 1 157 -83 1 763 5860 0 0 1 chrUextra 23442298 23442946 -5561710 + ROO_I LTR Pao 881 1527 -6729 1 763 2977 178 10 22 chrUextra 23443048 23443640 -5561016 + SAR_DM Satellite Satellite 1 641 -396 1 763 288 94 0 70 chrUextra 23443640 23443697 -5560959 - XDMR_DM Unknown Unknown -8 352 300 1 763 551 176 81 51 chrUextra 23443873 23444070 -5560586 + DMCR1A LINE CR1 4227 4429 -41 1 763 2399 41 3 86 chrUextra 23444077 23444448 -5560208 - Gypsy12_LTR LTR Gypsy -1400 936 597 1 763 409 0 0 0 chrUextra 23444548 23444595 -5560061 - NTS_DM Other Other -193 47 1 1 763 1850 4 17 13 chrUextra 23444595 23444834 -5559822 - NTS_DM Other Other 0 240 1 1 763 1804 13 17 13 chrUextra 23444834 23445073 -5559583 - NTS_DM Other Other 0 240 1 1 763 757 25 32 32 chrUextra 23445073 23445199 -5559457 - NTS_DM Other Other 0 240 115 1 763 23 68 0 0 chrUextra 23445465 23445509 -5559147 + AT_rich Low_complexity Low_complexity 1 44 0 1 763 21 89 0 0 chrUextra 23445547 23445603 -5559053 + AT_rich Low_complexity Low_complexity 1 56 0 1 763 5325 17 0 1 chrUextra 23446050 23446701 -5557955 + DOC2_DM LINE Jockey 2729 3378 -1415 1 763 2900 172 25 6 chrUextra 23446801 23447450 -5557206 - SAR_DM Satellite Satellite -466 1006 346 1 763 5561 9 0 0 chrUextra 23447552 23448203 -5556453 + R1_DM LINE R1 4334 4984 -372 1 763 641 0 0 13 chrUextra 23448303 23448381 -5556275 + LSU-rRNA_Dme rRNA rRNA 1712 1788 -2112 1 763 4533 2 0 4 chrUextra 23448426 23448954 -5555702 + LSU-rRNA_Dme rRNA rRNA 1788 2313 -1587 1 763 5608 5 1 0 chrUextra 23449054 23449705 -5554951 + LSU-rRNA_Dme rRNA rRNA 1874 2525 -1375 1 763 2902 176 11 8 chrUextra 23449805 23450456 -5554200 - SAR_DM Satellite Satellite -468 1004 352 1 763 265 185 24 24 chrUextra 23450556 23450639 -5554017 + XDMR_DM Unknown Unknown 278 360 0 1 763 2558 182 13 24 chrUextra 23450572 23451207 -5553449 - SAR_DM Satellite Satellite -371 1101 474 1 763 2985 167 9 9 chrUextra 23451307 23451958 -5552698 - SAR_DM Satellite Satellite -489 983 333 1 763 637 187 13 51 chrUextra 23452108 23452266 -5552390 - HETRP_DM Satellite Satellite -203 1669 1518 1 763 665 186 7 14 chrUextra 23452383 23452525 -5552131 - HETRP_DM Satellite Satellite -203 1669 1529 1 763 3650 0 7 0 chrUextra 23452809 23453235 -5551421 - TART LINE telomeric -6953 7524 7096 1 763 1989 4 0 0 chrUextra 23453232 23453460 -5551196 - TART LINE telomeric -7568 6909 6682 1 763 4581 78 0 0 chrUextra 23453560 23454211 -5550445 - STALKER4_I LTR Gypsy -477 6053 5403 1 763 223 0 0 161 chrUextra 23454311 23454510 -5550146 + (TCTTG)n Simple_repeat Simple_repeat 2 168 0 1 763 2096 189 88 23 chrUextra 23455062 23455713 -5548943 + TAHRE LINE telomeric 7213 7905 -2558 1 763 5282 18 3 0 chrUextra 23455813 23456464 -5548192 - Gypsy4_I LTR Gypsy -1447 4841 4189 1 763 2698 181 26 9 chrUextra 23456574 23457215 -5547441 - SAR_DM Satellite Satellite -396 1076 425 1 763 5296 20 5 0 chrUextra 23457315 23457966 -5546690 + R1_DM LINE R1 2601 3254 -2102 1 763 5423 14 0 1 chrUextra 23458066 23458717 -5545939 + DOC2_DM LINE Jockey 2737 3386 -1407 1 763 4267 35 167 0 chrUextra 23458817 23459468 -5545188 - R1_DM LINE R1 -3296 2060 1301 1 763 1757 49 0 0 chrUextra 23459573 23459799 -5544857 + PROTOP DNA P 74 299 -4181 1 763 1544 53 102 2 chrUextra 23459786 23460219 -5544437 + PROTOP_A DNA P 522 862 -243 1 763 244 167 19 0 chrUextra 23460319 23460373 -5544283 + XDMR Unknown Unknown 307 361 0 1 763 2596 184 9 20 chrUextra 23460327 23460970 -5543686 - SAR_DM Satellite Satellite -361 1111 476 1 763 5384 11 0 1 chrUextra 23461070 23461721 -5542935 + STALKER4_I LTR Gypsy 2480 3129 -3401 1 95 2410 197 56 5 chrUextra 23461824 23462471 -5542185 + SAR_DM Satellite Satellite 347 1026 -446 1 764 501 197 71 63 chrUextra 23462575 23462829 -5541827 + BATUMI_I LTR Pao 469 724 -7239 1 764 789 123 8 232 chrUextra 23462803 23463183 -5541473 + BATUMI_I LTR Pao 595 889 -7074 1 764 5093 5 1 1 chrUextra 23463323 23463974 -5540682 - FB4_DM DNA Tc1 -519 3570 2920 1 764 2723 187 8 8 chrUextra 23464075 23464712 -5539944 + SAR_DM Satellite Satellite 267 903 -569 1 764 786 39 0 0 chrUextra 23464622 23464725 -5539931 - ARS406_DM Unknown Unknown -164 189 87 1 764 5357 1 0 0 chrUextra 23464825 23465476 -5539180 + DM176_I LTR Gypsy 1267 1917 -4503 1 764 2481 90 217 0 chrUextra 23465577 23466227 -5538429 - IDEFIX_I LTR Gypsy -584 5044 4254 1 764 4540 22 0 0 chrUextra 23466327 23466874 -5537782 + R1_DM LINE R1 3113 3659 -1697 1 764 765 66 9 0 chrUextra 23466872 23466978 -5537678 + R1_DM LINE R1 4833 4939 -417 1 764 852 107 6 18 chrUextra 23467078 23467589 -5537067 - RSP Satellite Satellite -2 505 1 1 764 676 71 0 20 chrUextra 23467628 23467729 -5536927 - RSP Satellite Satellite 0 118 20 1 764 2264 74 27 43 chrUextra 23467829 23468402 -5536254 - NINJA_I LTR Pao -5489 522 1 1 764 585 51 13 0 chrUextra 23468402 23468480 -5536176 - NINJA_LTR LTR Pao 0 317 239 1 764 5333 21 0 1 chrUextra 23468580 23469231 -5535425 - FW_DM LINE Jockey -64 4628 3979 1 764 378 0 0 0 chrUextra 23469331 23469373 -5535283 + (TTCTC)n Simple_repeat Simple_repeat 5 46 0 1 764 5383 11 0 5 chrUextra 23470082 23470733 -5533923 - IDEFIX_I LTR Gypsy -2414 3214 2567 1 764 2987 23 72 0 chrUextra 23470834 23471484 -5533172 - R1_DM LINE R1 -1528 3828 3132 1 764 4375 12 63 3 chrUextra 23471584 23472235 -5532421 + SSU-rRNA_Dme rRNA rRNA 845 1534 -461 1 764 2878 9 0 0 chrUextra 23472335 23472667 -5531989 - LINEJ1_DM LINE Jockey -1093 3927 3596 1 764 551 0 128 9 chrUextra 23472668 23472983 -5531673 + (TA)n Simple_repeat Simple_repeat 1 352 0 1 764 2253 189 11 8 chrUextra 23473086 23473731 -5530925 + SAR_DM Satellite Satellite 1 646 -677 1 764 1628 282 25 28 chrUextra 23473839 23474478 -5530178 - Gypsy6_I LTR Gypsy -4389 2623 1987 1 764 4877 2 5 7 chrUextra 23474588 23475176 -5529480 + LSU-rRNA_Dme rRNA rRNA 1202 1788 -2112 1 764 5138 1 123 0 chrUextra 23475339 23475990 -5528666 + TART LINE telomeric 5839 6569 -7908 1 764 3427 84 65 32 chrUextra 23476090 23476741 -5527915 + STALKER4_I LTR Gypsy 666 1337 -5193 1 764 4812 24 3 40 chrUextra 23476841 23477492 -5527164 + DOC2_DM LINE Jockey 828 1454 -3339 1 764 2107 32 7 17 chrUextra 23477592 23477880 -5526776 - BATUMI_I LTR Pao -1087 6876 6592 1 764 1113 66 16 47 chrUextra 23477833 23478024 -5526632 + BATUMI_I LTR Pao 7779 7963 0 1 764 1423 47 5 40 chrUextra 23478024 23478243 -5526413 + BATUMI_I LTR Pao 7002 7212 -751 1 764 2792 181 12 8 chrUextra 23478343 23478994 -5525662 + SAR_DM Satellite Satellite 198 851 -621 1 764 3350 10 3 0 chrUextra 23479094 23479486 -5525170 + Invader1_LTR LTR Gypsy 31 423 0 1 764 2259 8 0 0 chrUextra 23479486 23479745 -5524911 + Invader1_I LTR Gypsy 1 259 -2927 1 764 5695 1 1 0 chrUextra 23479845 23480496 -5524160 + LSU-rRNA_Dme rRNA rRNA 2913 3564 -336 1 764 686 193 264 91 chrUextra 23480602 23481007 -5523649 - TAHRE LINE telomeric -3988 10489 9807 1 764 1376 134 8 16 chrUextra 23480997 23481247 -5523409 - Gypsy12A_LTR LTR Gypsy -18 2262 2015 1 764 2302 80 26 35 chrUextra 23481347 23481998 -5522658 - DMSAT6 Satellite Satellite -7 645 1 1 764 5326 26 1 1 chrUextra 23482098 23482749 -5521907 + R1_DM LINE R1 4346 4996 -360 1 764 2419 106 21 10 chrUextra 23482851 23483469 -5521187 + DMSAT6 Satellite Satellite 1 624 -74 1 764 694 0 12 0 chrUextra 23483600 23483683 -5520973 + LSU-rRNA_Dme rRNA rRNA 3817 3900 0 1 764 22 56 0 0 chrUextra 23483755 23483791 -5520865 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 246 150 0 0 chrUextra 23483796 23483836 -5520820 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 246 150 0 0 chrUextra 23483888 23483928 -5520728 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 246 150 0 0 chrUextra 23483980 23484020 -5520636 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 255 125 0 0 chrUextra 23484063 23484103 -5520553 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 22 56 0 0 chrUextra 23484116 23484152 -5520504 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 532 29 0 41 chrUextra 23484178 23484251 -5520405 + NTS_DM Other Other 25 94 -146 1 764 3949 114 26 14 chrUextra 23484351 23485002 -5519654 + Gypsy12_I LTR Gypsy 2507 3165 -2381 1 764 5452 5 2 0 chrUextra 23485102 23485744 -5518912 - QUASIMODO_LTR LTR Gypsy -15 643 1 1 764 2431 32 0 28 chrUextra 23486130 23486453 -5518203 - NINJA_LTR LTR Pao -3 314 1 1 764 402 20 0 0 chrUextra 23486453 23486504 -5518152 - NINJA_I LTR Pao 0 6011 5961 1 764 3262 126 4 4 chrUextra 23486604 23487255 -5517401 - BATUMI_I LTR Pao -3262 4652 3926 1 764 3879 16 8 4 chrUextra 23487355 23488006 -5516650 - MDG3_I LTR Gypsy -5 4981 4262 1 764 21 89 0 0 chrUextra 23488457 23488513 -5516143 + AT_rich Low_complexity Low_complexity 1 56 0 1 764 1986 0 0 0 chrUextra 23488532 23488757 -5515899 - SSU-rRNA_Dme rRNA rRNA 0 1995 1771 1 764 3327 205 21 28 chrUextra 23488858 23490259 -5514397 - SAR_DM Satellite Satellite -404 1391 1 1 764 246 150 0 0 chrUextra 23490398 23490438 -5514218 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 246 150 0 0 chrUextra 23490490 23490530 -5514126 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 255 125 0 0 chrUextra 23490573 23490613 -5514043 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 22 56 0 0 chrUextra 23490626 23490662 -5513994 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 870 9 0 27 chrUextra 23490688 23490800 -5513856 + NTS_DM Other Other 25 133 -107 1 764 1246 18 0 12 chrUextra 23490800 23490966 -5513690 + NTS_DM Other Other 38 201 -39 1 764 28 48 0 0 chrUextra 23491907 23491949 -5512707 + AT_rich Low_complexity Low_complexity 1 42 0 1 764 32 0 0 0 chrUextra 23492278 23492310 -5512346 + AT_rich Low_complexity Low_complexity 1 32 0 1 764 614 0 0 0 chrUextra 23492442 23492512 -5512144 + SSU-rRNA_Dme rRNA rRNA 1 70 -1925 1 764 2331 0 4 4 chrUextra 23492612 23492884 -5511772 + SSU-rRNA_Dme rRNA rRNA 1724 1995 0 1 764 21 89 0 0 chrUextra 23492903 23492959 -5511697 + AT_rich Low_complexity Low_complexity 1 56 0 1 764 23 68 0 0 chrUextra 23493574 23493618 -5511038 + AT_rich Low_complexity Low_complexity 1 44 0 1 764 26 30 0 0 chrUextra 23493664 23493697 -5510959 + AT_rich Low_complexity Low_complexity 1 33 0 1 764 4889 22 3 0 chrUextra 23494114 23494709 -5509947 - R1_DM LINE R1 -353 5003 4407 1 764 309 0 0 0 chrUextra 23494729 23494765 -5509891 - R1_DM LINE R1 -1074 4282 4247 1 764 5276 9 5 0 chrUextra 23494865 23495516 -5509140 + Invader2_I LTR Gypsy 3731 4384 -208 1 764 2126 4 0 23 chrUextra 23495616 23495872 -5508784 - CIRCE LINE Composite -4219 2137 1888 1 764 504 299 46 46 chrUextra 23495872 23495939 -5508717 - Gypsy12_I LTR Gypsy -1389 4157 3835 1 764 2634 28 0 0 chrUextra 23495948 23496267 -5508389 - CIRCE LINE Composite -4474 1882 1564 1 764 1830 93 107 50 chrUextra 23496367 23496787 -5507869 + BATUMI_I LTR Pao 156 599 -7364 1 764 391 70 42 0 chrUextra 23496809 23496880 -5507776 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 1 764 342 52 0 79 chrUextra 23496882 23496945 -5507711 + BATUMI_I LTR Pao 712 769 -7194 1 764 5515 5 1 0 chrUextra 23497118 23497769 -5506887 + STALKER4_I LTR Gypsy 1799 2450 -4080 1 764 4315 17 20 1 chrUextra 23497869 23498517 -5506139 - MAX_I LTR Pao -6999 915 309 1 764 5293 21 1 1 chrUextra 23498620 23499271 -5505385 + R1_DM LINE R1 3453 4103 -1253 1 764 5126 19 0 0 chrUextra 23499372 23500000 -5504656 - MDG1_I LTR Gypsy -576 6020 5393 1 764 2863 6 3 0 chrUextra 23500122 23500472 -5504184 - Copia_I LTR Copia -2063 2530 2180 1 764 2493 7 0 0 chrUextra 23500477 23500773 -5503883 - Copia_I LTR Copia -3056 1537 1242 1 764 946 75 9 21 chrUextra 23500886 23501524 -5503132 + RSP Satellite Satellite 1 630 0 1 764 5501 8 0 1 chrUextra 23501624 23502275 -5502381 - DOC2_DM LINE Jockey -207 4586 3937 1 764 5347 17 1 1 chrUextra 23502376 23503026 -5501630 - R1_DM LINE R1 -1528 3828 3179 1 764 662 0 13 0 chrUextra 23503126 23503204 -5501452 + (TTGTG)n Simple_repeat Simple_repeat 2 80 0 1 764 4417 0 0 0 chrUextra 23503204 23503707 -5500949 - TABOR_LTR LTR Gypsy -3 503 1 1 764 542 0 0 0 chrUextra 23503705 23503777 -5500879 - TABOR_I LTR Gypsy 0 6336 6265 1 764 2971 166 17 8 chrUextra 23503881 23504525 -5500131 + SAR_DM Satellite Satellite 246 895 -577 1 764 1261 58 6 0 chrUextra 23504628 23504800 -5499856 - R1_DM LINE R1 -5183 173 1 1 764 3132 18 128 0 chrUextra 23504833 23505279 -5499377 - R1_DM LINE R1 0 5356 4854 1 764 5267 12 1 3 chrUextra 23505379 23506030 -5498626 - DMRT1B LINE R1 -3920 1263 614 1 764 610 14 0 0 chrUextra 23506130 23506201 -5498455 - NTS_DM Other Other -169 71 1 1 764 1740 21 17 17 chrUextra 23506201 23506441 -5498215 - NTS_DM Other Other 0 240 1 1 764 1781 13 17 17 chrUextra 23506441 23506681 -5497975 - NTS_DM Other Other 0 240 1 1 764 619 10 40 40 chrUextra 23506681 23506781 -5497875 - NTS_DM Other Other 0 240 141 1 764 4549 100 0 0 chrUextra 23506881 23507532 -5497124 + Gypsy12_I LTR Gypsy 3457 4107 -1439 1 764 22 56 0 0 chrUextra 23507723 23507759 -5496897 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 246 150 0 0 chrUextra 23507764 23507804 -5496852 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 3766 0 0 0 chrUextra 23507824 23508252 -5496404 + ROO_LTR LTR Pao 1 428 0 1 764 268 0 0 0 chrUextra 23508252 23508283 -5496373 + ROO_I LTR Pao 1 31 -8225 1 764 3532 63 0 6 chrUextra 23508383 23508874 -5495782 + BATUMI_I LTR Pao 7476 7963 0 1 764 983 62 16 22 chrUextra 23508874 23509034 -5495622 + BATUMI_LTR LTR Pao 35 166 -106 1 764 711 0 0 0 chrUextra 23509134 23509213 -5495443 + (GAGAA)n Simple_repeat Simple_repeat 2 80 0 1 764 1212 63 0 0 chrUextra 23509216 23509391 -5495265 + (ATAAG)n Simple_repeat Simple_repeat 4 178 0 1 764 1458 26 0 11 chrUextra 23509391 23509666 -5494990 + (CAGAT)n Simple_repeat Simple_repeat 1 272 0 1 764 909 35 0 0 chrUextra 23509670 23509783 -5494873 + (CTAAG)n Simple_repeat Simple_repeat 1 113 0 1 764 5210 12 74 6 chrUextra 23509886 23510536 -5494120 + FW_DM LINE Jockey 3390 4083 -609 1 764 549 346 33 31 chrUextra 23512159 23512672 -5491984 - Copia2_I LTR Copia -1197 2965 2452 1 764 836 17 8 57 chrUextra 23512889 23513011 -5491645 - NINJA_LTR LTR Pao -201 116 1 1 764 4174 29 4 2 chrUextra 23513011 23513540 -5491116 - NINJA_I LTR Pao 0 6011 5482 1 764 2318 103 12 45 chrUextra 23513641 23514291 -5490365 - DMSAT6 Satellite Satellite -79 629 1 1 764 5189 28 40 0 chrUextra 23514391 23515042 -5489614 - R1_DM LINE R1 -3237 2119 1443 1 764 2100 249 52 8 chrUextra 23515145 23516533 -5488123 - SAR_DM Satellite Satellite -535 1449 1 1 764 2451 10 17 0 chrUextra 23516644 23516936 -5487720 - DMRT1B LINE R1 -1351 3832 3536 1 764 549 0 0 0 chrUextra 23516936 23516997 -5487659 + (CACAA)n Simple_repeat Simple_repeat 1 61 0 1 764 4515 53 3 45 chrUextra 23517395 23518046 -5486610 - R1_DM LINE R1 -4503 853 230 1 764 4175 106 32 9 chrUextra 23518146 23518797 -5485859 - Gypsy12_I LTR Gypsy -3403 2143 1478 1 764 336 220 18 0 chrUextra 23518900 23519009 -5485647 + (TTTG)n Simple_repeat Simple_repeat 4 114 0 1 764 3402 2 0 5 chrUextra 23519010 23519413 -5485243 + STALKER4_LTR LTR Gypsy 2 402 0 1 764 943 0 0 53 chrUextra 23519413 23519546 -5485110 + STALKER4_I LTR Gypsy 1 126 -6404 1 764 5458 2 5 3 chrUextra 23519654 23520299 -5484357 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1095 1 764 678 143 0 0 chrUextra 23520400 23520519 -5484137 + (TATG)n Simple_repeat Simple_repeat 2 120 0 1 764 1158 122 0 0 chrUextra 23520518 23520698 -5483958 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 764 1071 139 0 0 chrUextra 23520728 23520908 -5483748 + (TATG)n Simple_repeat Simple_repeat 1 180 0 1 764 789 148 0 19 chrUextra 23520870 23521029 -5483627 + (TA)n Simple_repeat Simple_repeat 1 156 0 1 764 5326 32 0 0 chrUextra 23521150 23521801 -5482855 + R2_DM LINE R2 2198 2848 -759 1 764 251 130 0 0 chrUextra 23521901 23521947 -5482709 - ARS406_DM Unknown Unknown -307 46 1 1 764 2664 182 22 9 chrUextra 23521907 23522549 -5482107 + SAR_DM Satellite Satellite 246 895 -577 1 764 2864 180 6 8 chrUextra 23522652 23523303 -5481353 - SAR_DM Satellite Satellite -618 854 205 1 764 5497 3 3 1 chrUextra 23523405 23524054 -5480602 - R1_DM LINE R1 -2003 3353 2704 1 764 1599 55 0 2 chrUextra 23524154 23524619 -5480037 + (TCTA)n Simple_repeat Simple_repeat 1 463 0 1 764 1460 0 0 22 chrUextra 23524620 23524804 -5479852 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 764 402 0 0 0 chrUextra 23524905 23524952 -5479704 - ROO_LTR LTR Pao -381 47 1 1 764 4552 30 0 2 chrUextra 23524952 23525556 -5479100 - ROO_I LTR Pao 0 8256 7654 1 764 1571 0 6 0 chrUextra 23525675 23525854 -5478802 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 764 524 214 0 0 chrUextra 23526407 23526533 -5478123 - ARS406_DM Unknown Unknown -227 126 1 1 764 2431 171 31 28 chrUextra 23526436 23527054 -5477602 + SAR_DM Satellite Satellite 191 810 -662 1 764 834 364 21 2 chrUextra 23527158 23527643 -5477013 - Gypsy6_I LTR Gypsy -5574 1438 945 1 764 920 86 9 21 chrUextra 23528667 23529305 -5475351 - RSP Satellite Satellite 0 630 1 1 764 2384 90 11 23 chrUextra 23530162 23530803 -5473853 + DMSAT6 Satellite Satellite 1 633 -37 1 764 686 269 0 0 chrUextra 23531146 23531328 -5473328 + Gypsy3_I LTR Gypsy 2578 2759 -3418 1 764 1125 228 0 0 chrUextra 23531323 23531564 -5473092 + Gypsy6_I LTR Gypsy 4549 4789 -2223 1 764 396 91 0 0 chrUextra 23531670 23531736 -5472920 + (TCTTG)n Simple_repeat Simple_repeat 2 67 0 1 764 2937 175 8 8 chrUextra 23532415 23533053 -5471603 - SAR_DM Satellite Satellite -466 1006 369 1 764 652 182 7 14 chrUextra 23533166 23533305 -5471351 + HETRP_DM Satellite Satellite 1532 1669 -203 1 764 655 186 7 14 chrUextra 23533440 23533582 -5471074 + HETRP_DM Satellite Satellite 1529 1669 -203 1 764 401 204 0 92 chrUextra 23533698 23533817 -5470839 + HETRP_DM Satellite Satellite 1518 1625 -247 1 764 2417 174 46 17 chrUextra 23533936 23534568 -5470088 + SAR_DM Satellite Satellite 208 857 -615 1 764 2653 166 11 5 chrUextra 23534668 23535307 -5469349 - SAR_DM Satellite Satellite -641 642 1 1 764 1176 0 0 0 chrUextra 23535545 23535680 -5468976 - 5S_DM RNA RNA 0 135 1 1 764 1135 15 0 0 chrUextra 23535904 23536039 -5468617 - 5S_DM RNA RNA 0 135 1 1 764 3154 43 0 0 chrUextra 23536921 23537338 -5467318 + I_DM LINE I 770 1186 -5045 1 764 587 155 353 42 chrUextra 23537334 23537572 -5467084 + ROVER-LTR_DM LTR Gypsy 55 366 -1 1 764 5524 0 0 1 chrUextra 23537672 23538323 -5466333 + ROO_I LTR Pao 2643 3292 -4964 1 764 2903 169 11 14 chrUextra 23538423 23539070 -5465586 - SAR_DM Satellite Satellite -1136 645 1 1 764 1823 0 0 0 chrUextra 23539174 23539384 -5465272 + GTWIN_LTR LTR Gypsy 286 495 0 1 764 3836 0 0 0 chrUextra 23539384 23539825 -5464831 + GTWIN_I LTR Gypsy 1 441 -5980 1 764 4180 78 126 17 chrUextra 23539925 23540576 -5464080 - Gypsy12_I LTR Gypsy -64 5482 4761 1 764 2960 150 28 17 chrUextra 23540676 23541325 -5463331 - SAR_DM Satellite Satellite -471 1001 346 1 764 2889 182 6 5 chrUextra 23541430 23542077 -5462579 + SAR_DM Satellite Satellite 332 979 -493 1 764 5305 16 0 9 chrUextra 23542929 23543580 -5461076 + G2_DM LINE Jockey 2395 3039 -63 1 764 241 158 0 95 chrUextra 23543692 23543797 -5460859 + DM412 LTR Gypsy 6705 6799 -98 1 764 1554 27 0 8 chrUextra 23543801 23544183 -5460473 + (TAA)n Simple_repeat Simple_repeat 1 378 0 1 764 767 97 185 7 chrUextra 23544185 23544331 -5460325 + MDG1_LTR LTR Gypsy 89 260 -182 1 764 442 99 0 0 chrUextra 23544432 23544503 -5460153 - ARS406_DM Unknown Unknown -282 71 1 1 764 2788 183 14 5 chrUextra 23544441 23545082 -5459574 + SAR_DM Satellite Satellite 224 870 -602 1 764 2562 189 11 19 chrUextra 23545182 23545830 -5458826 + SAR_DM Satellite Satellite 469 1111 -361 1 764 2671 174 11 11 chrUextra 23546688 23547309 -5457347 + SAR_DM Satellite Satellite 456 1076 -396 1 764 3934 4 0 8 chrUextra 23547610 23548086 -5456570 - LINEJ1_DM LINE Jockey 0 5020 4549 1 764 2174 0 0 0 chrUextra 23548186 23548454 -5456202 + Invader2_I LTR Gypsy 4322 4589 -3 1 764 2332 0 0 0 chrUextra 23548457 23548723 -5455933 + Invader2_LTR LTR Gypsy 1 266 0 1 764 713 0 0 0 chrUextra 23549688 23549769 -5454887 - NTS_DM Other Other -159 81 1 1 764 1847 4 17 13 chrUextra 23549769 23550008 -5454648 - NTS_DM Other Other 0 240 1 1 764 1825 8 17 13 chrUextra 23550008 23550247 -5454409 - NTS_DM Other Other 0 240 1 1 764 615 0 43 33 chrUextra 23550247 23550339 -5454317 - NTS_DM Other Other 0 240 148 1 764 5571 0 0 0 chrUextra 23551190 23551841 -5452815 - MICROPIA_I LTR Gypsy -59 4417 3767 1 764 3429 37 0 2 chrUextra 23551979 23552408 -5452248 + ROO_LTR LTR Pao 1 428 0 1 764 902 75 13 33 chrUextra 23552441 23552592 -5452064 + ROO_I LTR Pao 114 261 -7995 1 764 262 31 0 0 chrUextra 23552692 23552724 -5451932 - NTS_DM Other Other -208 32 1 1 764 1408 20 20 20 chrUextra 23552724 23552927 -5451729 - NTS_DM Other Other 0 240 38 1 764 817 0 0 0 chrUextra 23552927 23553023 -5451633 - NTS_DM Other Other -107 133 38 1 764 832 9 9 27 chrUextra 23553023 23553134 -5451522 - NTS_DM Other Other -107 133 25 1 764 21 57 0 0 chrUextra 23553160 23553195 -5451461 + AT_rich Low_complexity Low_complexity 1 35 0 1 764 1023 27 0 7 chrUextra 23553195 23553342 -5451314 - NTS_DM Other Other -39 201 56 1 764 319 309 40 40 chrUextra 23553494 23553889 -5450767 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 764 5472 5 0 5 chrUextra 23554192 23554842 -5449814 + R1_DM LINE R1 4565 5211 -145 1 764 2377 7 10 10 chrUextra 23555293 23555592 -5449064 + DM297_LTR LTR Gypsy 1 299 -115 1 764 3329 217 1 1 chrUextra 23555694 23556341 -5448315 - Gypsy6_I LTR Gypsy -2139 4873 4227 1 764 1030 26 0 0 chrUextra 23556442 23556559 -5448097 + ROO_I LTR Pao 4089 4205 -4051 1 764 4663 24 0 0 chrUextra 23556555 23557092 -5447564 - FW_DM LINE Jockey 0 4692 4156 1 764 5701 0 19 1 chrUextra 23557192 23557842 -5446814 - ROO_I LTR Pao -7008 1248 588 1 764 891 128 0 0 chrUextra 23558123 23558264 -5446392 + (TATG)n Simple_repeat Simple_repeat 2 142 0 1 764 1158 122 0 0 chrUextra 23558263 23558443 -5446213 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 764 230 288 0 36 chrUextra 23558446 23558529 -5446127 - OSVALDO_LTR LTR Gypsy -1105 91 12 1 764 226 288 0 48 chrUextra 23558487 23558571 -5446085 + OSVALDO_LTR LTR Gypsy 12 91 -1105 1 764 1189 8 0 0 chrUextra 23558692 23558824 -5445832 - Copia2_I LTR Copia -3607 555 424 1 764 4565 8 0 0 chrUextra 23558824 23559319 -5445337 - GTWIN_LTR LTR Gypsy 0 495 1 1 764 5835 15 1 0 chrUextra 23559442 23560092 -5444564 - R1_DM LINE R1 -3090 2266 1616 1 764 772 112 4 53 chrUextra 23560192 23560347 -5444309 + STALKER4_LTR LTR Gypsy 249 392 -10 1 764 2439 98 13 26 chrUextra 23560351 23560812 -5443844 - DMSAT6 Satellite Satellite -10 460 6 1 764 2375 8 0 4 chrUextra 23560942 23561203 -5443453 - R2_DM LINE R2 -3347 260 1 1 764 3557 0 0 0 chrUextra 23561202 23561592 -5443064 - R1_DM LINE R1 -2403 2953 2564 1 764 3025 182 14 5 chrUextra 23561696 23562341 -5442315 - SAR_DM Satellite Satellite -593 879 229 1 764 1931 95 58 50 chrUextra 23562463 23562827 -5441829 - ROVER-LTR_DM LTR Gypsy 0 367 1 1 764 1247 142 75 19 chrUextra 23562827 23563092 -5441564 - ROVER-I_DM LTR Gypsy 0 6584 6305 1 764 3704 40 4 5 chrUextra 23563192 23563842 -5440814 - R1_DM LINE R1 -2260 3096 2415 1 764 3573 5 2 0 chrUextra 23563942 23564335 -5440321 - DMRT1B LINE R1 -539 4644 4251 1 764 2004 66 4 8 chrUextra 23564331 23564592 -5440064 + R1_DM LINE R1 176 435 -4921 1 764 3943 2 0 2 chrUextra 23564692 23565121 -5439535 + LSU-rRNA_Dme rRNA rRNA 2205 2632 -1268 1 764 1998 0 9 0 chrUextra 23565121 23565342 -5439314 + R1_DM LINE R1 1 223 -5133 1 764 771 89 315 0 chrUextra 23565443 23565589 -5439067 - TART LINE telomeric -10675 3802 3611 1 764 3396 70 142 6 chrUextra 23565591 23566092 -5438564 - TART LINE telomeric -6448 8029 7461 1 764 5654 34 0 0 chrUextra 23566192 23566842 -5437814 - R1_DM LINE R1 -3389 1967 1318 1 764 1821 277 25 29 chrUextra 23566942 23567592 -5437064 + ROVER-I_DM LTR Gypsy 1292 1938 -4646 1 764 2100 23 0 4 chrUextra 23567692 23567950 -5436706 - BATUMI_I LTR Pao -404 7559 7303 1 764 3017 25 8 8 chrUextra 23567973 23568342 -5436314 + BATUMI_I LTR Pao 6427 6795 -1168 1 764 2350 29 4 0 chrUextra 23568442 23568719 -5435937 - NINJA_I LTR Pao -1735 4276 3999 1 764 3220 31 23 10 chrUextra 23568696 23569092 -5435564 - NINJA_I LTR Pao -3164 2847 2447 1 764 738 12 0 0 chrUextra 23569193 23569273 -5435383 - LSU-rRNA_Dme rRNA rRNA -1181 2719 2640 1 764 5275 2 0 0 chrUextra 23569271 23569839 -5434817 - R1_DM LINE R1 0 5356 4789 1 764 1248 7 0 0 chrUextra 23570153 23570288 -5434368 - 5S_DM RNA RNA 0 135 1 1 764 582 15 0 0 chrUextra 23570526 23570592 -5434064 - 5S_DM RNA RNA 0 135 70 1 764 5486 42 1 1 chrUextra 23570692 23571342 -5433314 - R1_DM LINE R1 -3785 1571 922 1 764 1248 7 0 0 chrUextra 23571516 23571651 -5433005 - 5S_DM RNA RNA 0 135 1 1 764 1258 0 0 0 chrUextra 23571882 23572017 -5432639 - 5S_DM RNA RNA 0 135 1 1 764 2663 83 23 11 chrUextra 23572198 23572841 -5431815 - DMSAT6 Satellite Satellite -64 650 1 1 764 2990 190 8 8 chrUextra 23572942 23573590 -5431066 - SAR_DM Satellite Satellite -588 884 237 1 764 2482 185 73 20 chrUextra 23573692 23574337 -5430319 + SAR_DM Satellite Satellite 539 1217 -255 1 764 5763 21 0 0 chrUextra 23574442 23575092 -5429564 - R1_DM LINE R1 -1546 3810 3161 1 764 3019 178 18 6 chrUextra 23575195 23575821 -5428835 + SAR_DM Satellite Satellite 282 914 -558 1 764 5926 3 1 3 chrUextra 23575942 23576592 -5428064 - SSU-rRNA_Dme rRNA rRNA -793 1202 554 1 764 5702 26 0 0 chrUextra 23576692 23577342 -5427314 - R1_DM LINE R1 -1801 3555 2906 1 764 5989 3 0 1 chrUextra 23577442 23578092 -5426564 - LSU-rRNA_Dme rRNA rRNA -1361 2539 1891 1 764 5829 14 1 0 chrUextra 23578192 23578842 -5425814 - Invader3_I LTR Gypsy -3073 1815 1165 1 764 6001 1 0 0 chrUextra 23578942 23579592 -5425064 + DOC LINE Jockey 2708 3357 -1368 1 764 2879 163 8 60 chrUextra 23579704 23580342 -5424314 - SAR_DM Satellite Satellite -411 1061 457 1 764 5918 1 1 1 chrUextra 23580442 23581092 -5423564 - R1_DM LINE R1 -3652 1704 1055 1 764 5767 25 0 0 chrUextra 23581192 23581842 -5422814 - BATUMI_I LTR Pao -2794 5169 4520 1 764 2518 84 5 52 chrUextra 23581942 23582590 -5422066 - DMSAT6 Satellite Satellite -30 616 1 1 764 1356 12 0 18 chrUextra 23582741 23582906 -5421750 - NTS_DM Other Other -78 162 1 1 764 1948 13 17 13 chrUextra 23582906 23583145 -5421511 - NTS_DM Other Other 0 240 1 1 764 1564 5 20 15 chrUextra 23583145 23583342 -5421314 - NTS_DM Other Other 0 240 43 1 764 1616 66 5 0 chrUextra 23583881 23584092 -5420564 + Baggins1 LINE LOA 4791 5002 -451 1 764 2954 178 29 11 chrUextra 23584196 23584842 -5419814 - SAR_DM Satellite Satellite -593 879 222 1 764 6061 1 0 1 chrUextra 23584942 23585592 -5419064 - SSU-rRNA_Dme rRNA rRNA -1149 846 198 1 764 5539 35 3 0 chrUextra 23585692 23586342 -5418314 - MAX_I LTR Pao -4589 3325 2674 1 764 753 63 0 10 chrUextra 23586442 23586538 -5418118 + NINJA_LTR LTR Pao 222 316 -1 1 764 4343 16 0 0 chrUextra 23586538 23587092 -5417564 - QUASIMODO_I LTR Gypsy -44 6016 5463 1 764 5966 1 0 1 chrUextra 23587192 23587842 -5416814 + R1_DM LINE R1 3077 3725 -1631 1 764 2863 182 17 23 chrUextra 23587942 23588588 -5416068 + SAR_DM Satellite Satellite 462 1103 -369 1 764 2498 195 73 28 chrUextra 23588702 23589342 -5415314 - TAHRE LINE telomeric -630 9833 9165 1 764 2571 188 71 28 chrUextra 23589442 23590092 -5414564 - TAHRE LINE telomeric -642 9821 9144 1 764 5822 3 3 1 chrUextra 23590192 23590842 -5413814 + R1_DM LINE R1 862 1512 -3844 1 764 5931 3 1 3 chrUextra 23590942 23591592 -5413064 + LSU-rRNA_Dme rRNA rRNA 926 1574 -2326 1 764 642 0 0 0 chrUextra 23591692 23591763 -5412893 + ACCORD_I LTR Gypsy 6218 6288 0 1 764 3896 2 146 0 chrUextra 23591763 23592250 -5412406 + ACCORD_LTR LTR Gypsy 1 558 0 1 764 810 22 11 0 chrUextra 23592250 23592342 -5412314 + ACCORD_I LTR Gypsy 1 93 -6195 1 764 1111 20 7 7 chrUextra 23592445 23592593 -5412063 + NTS_DM Other Other 54 201 -39 1 764 928 9 0 27 chrUextra 23592645 23592757 -5411899 + NTS_DM Other Other 25 133 -107 1 764 1332 18 0 6 chrUextra 23592757 23592922 -5411734 + NTS_DM Other Other 38 201 -39 1 765 907 18 0 27 chrUextra 23592974 23593086 -5411570 + NTS_DM Other Other 25 133 -107 1 765 243 0 0 0 chrUextra 23593303 23593330 -5411326 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 765 2776 189 8 20 chrUextra 23593942 23594591 -5410065 + SAR_DM Satellite Satellite 463 1103 -369 1 765 4811 40 0 0 chrUextra 23594692 23595287 -5409369 + I_DM LINE I 592 1186 -5045 1 765 395 74 0 0 chrUextra 23595283 23595337 -5409319 + ROVER-LTR_DM LTR Gypsy 55 108 -259 1 765 5938 1 1 1 chrUextra 23595442 23596091 -5408565 - R1_DM LINE R1 -3046 2310 1662 1 765 1158 122 0 0 chrUextra 23596192 23596422 -5408234 + (TA)n Simple_repeat Simple_repeat 1 230 0 1 765 3761 9 0 0 chrUextra 23596423 23596842 -5407814 + DM176_LTR LTR Gypsy 1 419 -88 1 765 2982 15 0 6 chrUextra 23596942 23597275 -5407381 + CIRCE LINE Composite 4042 4372 -1984 1 765 2871 9 3 0 chrUextra 23597275 23597592 -5407064 + Invader1_LTR LTR Gypsy 1 318 -105 1 765 3225 166 9 11 chrUextra 23597692 23598342 -5406314 - SAR_DM Satellite Satellite -546 926 278 1 765 3037 166 43 11 chrUextra 23598442 23599092 -5405564 - SAR_DM Satellite Satellite -455 1017 347 1 765 299 303 51 47 chrUextra 23599548 23599801 -5404855 + Copia2_I LTR Copia 2452 2705 -1457 1 765 3121 28 0 0 chrUextra 23599943 23600301 -5404355 - PROTOP_A DNA P -747 358 1 1 765 5628 12 1 1 chrUextra 23600692 23601342 -5403314 - LSU-rRNA_Dme rRNA rRNA -2922 978 329 1 765 1006 47 0 0 chrUextra 23602192 23602319 -5402337 + ARS406_DM Unknown Unknown 63 189 -164 1 765 2252 189 98 29 chrUextra 23602216 23602841 -5401815 - SAR_DM Satellite Satellite -203 1269 602 1 765 5912 17 0 0 chrUextra 23602942 23603592 -5401064 + Gypsy12_I LTR Gypsy 2726 3375 -2171 1 765 1189 0 0 0 chrUextra 23604442 23604569 -5400087 + LSU-rRNA_Dme rRNA rRNA 3774 3900 0 1 765 27 0 0 0 chrUextra 23604641 23604668 -5399988 + AT_rich Low_complexity Low_complexity 1 27 0 1 765 266 196 0 19 chrUextra 23604670 23604722 -5399934 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 765 266 196 0 19 chrUextra 23604762 23604814 -5399842 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 765 928 9 0 27 chrUextra 23604887 23604999 -5399657 + NTS_DM Other Other 25 133 -107 1 765 846 0 0 0 chrUextra 23604999 23605092 -5399564 + NTS_DM Other Other 38 130 -110 1 765 1852 64 417 2 chrUextra 23605192 23605618 -5399038 + PROTOP_B DNA P 253 856 -297 1 765 1533 99 9 0 chrUextra 23605626 23605838 -5398818 - Jockey2 LINE Jockey -1608 1820 1607 1 765 3002 192 6 8 chrUextra 23605942 23606588 -5398068 + SAR_DM Satellite Satellite 208 852 -620 1 765 450 216 17 33 chrUextra 23606692 23606812 -5397844 + HETRP_DM Satellite Satellite 1565 1682 -190 1 765 246 32 0 0 chrUextra 23606927 23606958 -5397698 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 765 547 212 15 29 chrUextra 23606958 23607094 -5397562 + HETRP_DM Satellite Satellite 1549 1682 -190 1 765 192 40 0 0 chrUextra 23607239 23607264 -5397392 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 765 333 234 0 13 chrUextra 23607264 23607342 -5397314 + HETRP_DM Satellite Satellite 1549 1625 -247 1 765 5718 2 0 0 chrUextra 23607459 23608092 -5396564 + LSU-rRNA_Dme rRNA rRNA 218 850 -3050 1 765 1331 45 6 0 chrUextra 23608192 23608349 -5396307 - Gypsy6A_LTR LTR Gypsy -233 187 30 1 765 232 54 0 51 chrUextra 23608349 23608388 -5396268 + G7_DM LINE Jockey 932 968 -224 1 765 1317 144 45 0 chrUextra 23608388 23608610 -5396046 - HOBO DNA hAT 0 3016 2785 1 765 894 67 0 49 chrUextra 23608614 23608756 -5395900 - PROTOP_B DNA P -706 447 313 1 765 233 29 0 29 chrUextra 23608759 23608794 -5395862 + (TAA)n Simple_repeat Simple_repeat 3 36 0 1 765 2505 267 21 0 chrUextra 23608805 23609228 -5395428 - PROTOP_B DNA P -723 430 1 1 765 330 101 102 6 chrUextra 23609393 23609465 -5395191 - TART LINE telomeric -3986 10491 10421 1 765 975 96 0 0 chrUextra 23609692 23609859 -5394797 + (TCTTG)n Simple_repeat Simple_repeat 4 170 0 1 765 3473 28 37 0 chrUextra 23610443 23610879 -5393777 + IDEFIX_I LTR Gypsy 4585 5036 -592 1 765 1984 5 0 0 chrUextra 23610879 23611092 -5393564 - ROO_LTR LTR Pao 0 428 216 1 765 922 62 53 8 chrUextra 23611192 23611323 -5393333 - ROVER-LTR_DM LTR Gypsy -230 137 1 1 765 275 150 264 57 chrUextra 23611323 23611414 -5393242 + STALKER4_LTR LTR Gypsy 261 373 -29 1 765 411 17 15 77 chrUextra 23611467 23611532 -5393124 + STALKER4_I LTR Gypsy 17 77 -6453 1 765 272 143 0 0 chrUextra 23611533 23611582 -5393074 - DM176_I LTR Gypsy -3192 3228 3180 1 765 317 296 18 25 chrUextra 23612341 23612504 -5392152 - MDG3_I LTR Gypsy -1562 3424 3263 1 765 23 68 0 0 chrUextra 23613193 23613237 -5391419 + AT_rich Low_complexity Low_complexity 1 44 0 1 765 26 30 0 0 chrUextra 23613283 23613316 -5391340 + AT_rich Low_complexity Low_complexity 1 33 0 1 765 568 15 0 0 chrUextra 23613442 23613509 -5391147 + R1_DM LINE R1 5290 5356 0 1 765 4061 66 4 4 chrUextra 23613542 23614092 -5390564 + R1_DM LINE R1 1 550 -4806 1 765 2839 174 14 8 chrUextra 23614194 23614833 -5389823 + SAR_DM Satellite Satellite 434 1076 -396 1 765 5502 6 0 0 chrUextra 23615692 23616342 -5388314 - R1_DM LINE R1 -2094 3262 2613 1 765 2325 92 23 15 chrUextra 23616442 23617091 -5387565 + DMSAT6 Satellite Satellite 1 654 -3 1 765 262 106 0 21 chrUextra 23617691 23617739 -5386917 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 765 351 49 65 16 chrUextra 23617761 23617823 -5386833 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 765 2918 166 14 11 chrUextra 23617944 23618591 -5386065 + SAR_DM Satellite Satellite 326 974 -498 1 765 1335 40 20 20 chrUextra 23618710 23618913 -5385743 - NTS_DM Other Other 0 240 38 1 765 817 0 0 0 chrUextra 23618913 23619009 -5385647 - NTS_DM Other Other -107 133 38 1 765 809 19 9 27 chrUextra 23619009 23619120 -5385536 - NTS_DM Other Other -107 133 25 1 765 21 57 0 0 chrUextra 23619146 23619181 -5385475 + AT_rich Low_complexity Low_complexity 1 35 0 1 765 1184 25 0 6 chrUextra 23619181 23619342 -5385314 - NTS_DM Other Other -39 201 42 1 765 1666 314 6 6 chrUextra 23620217 23620842 -5383814 - GTWIN_I LTR Gypsy -2779 3642 3018 1 765 5059 32 5 0 chrUextra 23620942 23621592 -5383064 - Gypsy2_I LTR Gypsy -1694 5318 4097 1 765 5276 28 12 0 chrUextra 23621692 23622342 -5382314 - R1_DM LINE R1 -3232 2124 1467 1 765 2840 169 25 6 chrUextra 23622442 23623081 -5381575 + SAR_DM Satellite Satellite 387 1037 -435 1 765 2956 168 15 9 chrUextra 23623192 23623842 -5380814 + SAR_DM Satellite Satellite 384 1037 -435 1 765 5680 0 3 0 chrUextra 23623942 23624592 -5380064 - LSU-rRNA_Dme rRNA rRNA -296 3604 2953 1 765 2691 27 0 3 chrUextra 23625442 23625773 -5378883 - FW_DM LINE Jockey -3963 729 400 1 765 2718 9 0 0 chrUextra 23625773 23626092 -5378564 + STALKER4_LTR LTR Gypsy 1 319 -83 1 765 2849 193 12 19 chrUextra 23626195 23626842 -5377814 - SAR_DM Satellite Satellite -615 642 1 1 765 5630 0 3 1 chrUextra 23626942 23627592 -5377064 - SSU-rRNA_Dme rRNA rRNA -68 1927 1277 1 765 5400 9 0 9 chrUextra 23627692 23628342 -5376314 + Invader3_I LTR Gypsy 3759 4402 -486 1 765 5206 29 6 0 chrUextra 23628442 23629092 -5375564 + R1_DM LINE R1 2653 3306 -2050 1 765 2519 196 20 25 chrUextra 23629192 23629841 -5374815 + SAR_DM Satellite Satellite 1 645 -208 1 765 23 68 0 0 chrUextra 23630266 23630310 -5374346 + AT_rich Low_complexity Low_complexity 1 44 0 1 765 26 30 0 0 chrUextra 23630356 23630389 -5374267 + AT_rich Low_complexity Low_complexity 1 33 0 1 765 5353 6 48 0 chrUextra 23630692 23631342 -5373314 + DOC2_DM LINE Jockey 2578 3258 -1535 1 765 1161 315 11 35 chrUextra 23632244 23632793 -5371863 - Gypsy6_I LTR Gypsy -4569 2443 1908 1 765 417 0 37 0 chrUextra 23632942 23632996 -5371660 - NTS_DM Other Other -184 56 1 1 765 1820 4 17 17 chrUextra 23632996 23633236 -5371420 - NTS_DM Other Other 0 240 1 1 765 1678 34 17 17 chrUextra 23633236 23633476 -5371180 - NTS_DM Other Other 0 240 1 1 765 674 27 35 35 chrUextra 23633476 23633592 -5371064 - NTS_DM Other Other 0 240 125 1 765 2542 207 12 21 chrUextra 23633692 23634342 -5370314 - SAR_DM Satellite Satellite -674 644 1 1 765 3162 128 21 36 chrUextra 23634442 23635048 -5369608 - TART LINE telomeric -7048 7429 6833 1 765 2926 174 8 9 chrUextra 23635192 23635841 -5368815 + SAR_DM Satellite Satellite 256 903 -569 1 765 4582 2 4 0 chrUextra 23635942 23636470 -5368186 - SSU-rRNA_Dme rRNA rRNA -1465 530 1 1 765 1222 0 14 0 chrUextra 23636692 23636839 -5367817 + SSU-rRNA_Dme rRNA rRNA 1847 1995 0 1 765 21 89 0 0 chrUextra 23636858 23636914 -5367742 + AT_rich Low_complexity Low_complexity 1 56 0 1 765 467 17 17 0 chrUextra 23637282 23637342 -5367314 + SSU-rRNA_Dme rRNA rRNA 957 1017 -978 1 765 5724 1 0 0 chrUextra 23637442 23638092 -5366564 + LSU-rRNA_Dme rRNA rRNA 2983 3632 -268 1 765 2292 25 0 0 chrUextra 23638192 23638467 -5366189 + PROTOP DNA P 6 280 -4200 1 765 2632 19 3 29 chrUextra 23638466 23638842 -5365814 + PROTOP DNA P 388 753 -3727 1 765 5256 6 0 0 chrUextra 23638942 23639592 -5365064 + DM176_I LTR Gypsy 1174 1823 -4597 1 765 4726 40 11 31 chrUextra 23639692 23640342 -5364314 - BATUMI_I LTR Pao -5247 2716 2080 1 765 2326 193 31 9 chrUextra 23640442 23641092 -5363564 + SAR_DM Satellite Satellite 1 663 -396 1 765 856 0 0 0 chrUextra 23641192 23641292 -5363364 + Invader2_LTR LTR Gypsy 167 266 0 1 765 4233 14 22 0 chrUextra 23641292 23641842 -5362814 + Invader2_I LTR Gypsy 1 562 -4030 1 765 579 133 0 0 chrUextra 23641942 23642047 -5362609 - ARS406_DM Unknown Unknown -248 105 1 1 765 2530 183 7 8 chrUextra 23641954 23642543 -5362113 + SAR_DM Satellite Satellite 195 782 -690 1 765 336 198 20 10 chrUextra 23642692 23642794 -5361862 + XDMR_DM Unknown Unknown 258 360 0 1 765 2600 179 6 21 chrUextra 23642710 23643342 -5361314 - SAR_DM Satellite Satellite -354 1118 496 1 765 5655 1 1 0 chrUextra 23643442 23644092 -5360564 - LSU-rRNA_Dme rRNA rRNA -1302 2598 1948 1 765 5632 1 0 1 chrUextra 23644192 23644842 -5359814 + LSU-rRNA_Dme rRNA rRNA 1901 2549 -1351 1 765 5227 0 2 2 chrUextra 23644992 23645592 -5359064 - LSU-rRNA_Dme rRNA rRNA 0 3900 3301 1 765 218 7 0 156 chrUextra 23645721 23645900 -5358756 + CT-rich Low_complexity Low_complexity 26 176 0 1 765 5321 26 0 0 chrUextra 23646442 23647092 -5357564 + R1_DM LINE R1 3168 3817 -1539 1 765 5668 0 1 1 chrUextra 23647192 23647842 -5356814 - LSU-rRNA_Dme rRNA rRNA -107 3793 3144 1 765 553 42 0 0 chrUextra 23647942 23648014 -5356642 + ARS406_DM Unknown Unknown 118 189 -164 1 765 3009 173 9 5 chrUextra 23647950 23648590 -5356066 - SAR_DM Satellite Satellite -593 879 237 1 765 1145 301 35 37 chrUextra 23649442 23650090 -5354566 - Gypsy6_I LTR Gypsy -4473 2539 1893 1 765 5332 21 0 1 chrUextra 23650192 23650842 -5353814 + NINJA_I LTR Pao 1294 1942 -4069 1 765 2638 181 10 10 chrUextra 23650942 23651562 -5353094 + SAR_DM Satellite Satellite 457 1076 -396 1 765 249 130 0 36 chrUextra 23651536 23651592 -5353064 - XDMR_DM Unknown Unknown -9 351 298 1 765 3035 169 6 8 chrUextra 23651696 23652342 -5352314 - SAR_DM Satellite Satellite -425 1047 403 1 765 2906 168 11 12 chrUextra 23652448 23653092 -5351564 - SAR_DM Satellite Satellite -396 1076 434 1 765 936 0 0 0 chrUextra 23653192 23653311 -5351345 - DM176_I LTR Gypsy -707 5713 5595 1 765 4420 2 0 0 chrUextra 23653310 23653842 -5350814 - DM176_I LTR Gypsy -1464 4956 4425 1 765 3541 267 11 25 chrUextra 23653948 23655342 -5349314 - SAR_DM Satellite Satellite -425 1374 1 1 765 5219 22 1 0 chrUextra 23655442 23656091 -5348565 + STALKER4_I LTR Gypsy 2241 2890 -3640 1 765 5540 1 20 0 chrUextra 23656191 23656840 -5347816 - Gypsy4_I LTR Gypsy -3909 2379 1718 1 765 2962 168 14 8 chrUextra 23657689 23658336 -5346320 - SAR_DM Satellite Satellite -470 1002 352 1 765 2974 163 13 9 chrUextra 23658451 23659087 -5345569 + SAR_DM Satellite Satellite 369 1006 -466 1 765 2873 182 8 8 chrUextra 23659187 23659836 -5344820 + SAR_DM Satellite Satellite 267 915 -557 1 765 2912 24 0 5 chrUextra 23659936 23660319 -5344337 + Invader2_I LTR Gypsy 3011 3391 -1201 1 765 2072 27 0 19 chrUextra 23660317 23660585 -5344071 + Invader2_I LTR Gypsy 2868 3130 -1462 1 765 1623 89 0 0 chrUextra 23660685 23660910 -5343746 + BS3_DM LINE Jockey 197 421 -1369 1 765 3115 68 12 0 chrUextra 23660910 23661334 -5343322 + BS3_DM LINE Jockey 526 954 -836 1 765 5547 3 0 0 chrUextra 23661434 23662083 -5342573 - R1_DM LINE R1 -2181 3175 2527 1 765 689 206 0 7 chrUextra 23662225 23662367 -5342289 - HETRP_DM Satellite Satellite -203 1669 1529 1 765 664 206 0 7 chrUextra 23662534 23662676 -5341980 - HETRP_DM Satellite Satellite -203 1669 1529 1 765 3377 75 102 0 chrUextra 23662932 23663453 -5341203 - R1-2_DM LINE R1 -2589 627 54 1 765 5525 0 3 0 chrUextra 23663681 23664330 -5340326 + R1_DM LINE R1 2639 3289 -2067 1 765 1041 95 0 2 chrUextra 23664431 23664880 -5339776 + (CAAGA)n Simple_repeat Simple_repeat 1 448 0 1 765 1044 96 0 0 chrUextra 23664887 23665064 -5339592 + (ACTAG)n Simple_repeat Simple_repeat 1 177 0 1 765 5401 17 1 0 chrUextra 23665179 23665828 -5338828 + Gypsy4_I LTR Gypsy 3971 4620 -1668 1 765 381 43 0 0 chrUextra 23666530 23666577 -5338079 + (GAGAA)n Simple_repeat Simple_repeat 1 47 0 1 765 2255 122 2 42 chrUextra 23666677 23667303 -5337353 - DMSAT6 Satellite Satellite -50 600 1 1 765 5394 22 0 0 chrUextra 23667426 23668075 -5336581 + ROO_I LTR Pao 2164 2812 -5444 1 765 2314 88 3 39 chrUextra 23668937 23669573 -5335083 + DMSAT6 Satellite Satellite 1 612 0 1 765 1410 69 5 5 chrUextra 23669677 23669880 -5334776 - BATUMI_I LTR Pao -7760 203 1 1 765 2203 25 0 27 chrUextra 23669880 23670171 -5334485 - BATUMI_I LTR Pao -679 7284 7002 1 765 385 0 0 37 chrUextra 23670171 23670225 -5334431 - BATUMI_I LTR Pao 0 7963 7912 1 765 813 57 24 16 chrUextra 23670197 23670322 -5334334 + BATUMI_I LTR Pao 6482 6607 -1356 1 765 5031 50 1 3 chrUextra 23670422 23671071 -5333585 - BATUMI_I LTR Pao -3760 4203 3556 1 765 225 19 0 36 chrUextra 23671171 23671227 -5333429 + HMSBEAGLE_I LTR Gypsy 743 796 -5733 1 765 974 29 52 12 chrUextra 23671227 23671399 -5333257 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 765 3520 0 7 2 chrUextra 23671399 23671820 -5332836 + HMSBEAGLE_I LTR Gypsy 969 1391 -5138 1 765 320 105 18 0 chrUextra 23672669 23672726 -5331930 - ARS406_DM Unknown Unknown -295 58 1 1 765 2878 176 14 5 chrUextra 23672686 23673314 -5331342 + SAR_DM Satellite Satellite 246 879 -593 1 765 5124 39 26 0 chrUextra 23673418 23674067 -5330589 - DMCR1A LINE CR1 -2663 1807 1142 1 765 4964 16 43 2 chrUextra 23674189 23674815 -5329841 + PROTOP_A DNA P 1 652 -453 1 765 2739 182 8 11 chrUextra 23674932 23675565 -5329091 + SAR_DM Satellite Satellite 371 1001 -471 1 765 5591 0 1 3 chrUextra 23675665 23676314 -5328342 - SSU-rRNA_Dme rRNA rRNA -798 1197 550 1 765 2617 171 8 30 chrUextra 23676417 23677054 -5327602 + SAR_DM Satellite Satellite 496 1118 -354 1 765 268 129 15 46 chrUextra 23676997 23677062 -5327594 - XDMR Unknown Unknown 0 361 299 1 765 3740 2 0 0 chrUextra 23677163 23677591 -5327065 - LSU-rRNA_Dme rRNA rRNA -1685 2215 1788 1 765 1417 6 11 6 chrUextra 23677635 23677812 -5326844 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1611 1 765 2293 0 4 4 chrUextra 23677912 23678181 -5326475 - LSU-rRNA_Dme rRNA rRNA -1844 2056 1788 1 765 2822 0 6 3 chrUextra 23678225 23678561 -5326095 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1452 1 765 3328 116 23 0 chrUextra 23678661 23679310 -5325346 - DM297_I LTR Gypsy -2702 3410 2724 1 765 2745 181 11 8 chrUextra 23679417 23680057 -5324599 - SAR_DM Satellite Satellite -577 895 254 1 765 2592 193 9 19 chrUextra 23680159 23680807 -5323849 + SAR_DM Satellite Satellite 462 1103 -369 1 765 394 0 0 0 chrUextra 23680908 23680955 -5323701 + R1_DM LINE R1 5310 5356 0 1 765 4775 0 0 4 chrUextra 23680967 23681524 -5323132 + R1_DM LINE R1 4802 5356 0 1 765 282 29 0 0 chrUextra 23681522 23681557 -5323099 + LSU-rRNA_Dme rRNA rRNA 2640 2674 -1226 1 765 2558 186 26 11 chrUextra 23681659 23682306 -5322350 + SAR_DM Satellite Satellite 190 846 -626 1 765 2800 156 14 42 chrUextra 23682410 23683053 -5321603 - SAR_DM Satellite Satellite -602 870 246 1 765 414 113 0 0 chrUextra 23683157 23683228 -5321428 - ARS406_DM Unknown Unknown -282 71 1 1 765 2696 175 10 10 chrUextra 23683188 23683801 -5320855 + SAR_DM Satellite Satellite 246 858 -614 1 765 1755 83 0 4 chrUextra 23683904 23684147 -5320509 + Gypsy12_I LTR Gypsy 5305 5546 0 1 765 1538 203 23 26 chrUextra 23684146 23684530 -5320126 + Gypsy12_LTR LTR Gypsy 1 383 -1953 1 765 2880 169 14 9 chrUextra 23684654 23685289 -5319367 - SAR_DM Satellite Satellite -466 1006 369 1 765 429 20 0 0 chrUextra 23685402 23685452 -5319204 + (CAAGA)n Simple_repeat Simple_repeat 5 54 0 1 765 1909 107 106 3 chrUextra 23686418 23686757 -5317899 + Invader1_I LTR Gypsy 2718 3091 -95 1 765 5494 1 5 3 chrUextra 23686900 23687549 -5317107 + LSU-rRNA_Dme rRNA rRNA 1056 1705 -2195 1 765 5292 11 1 5 chrUextra 23687649 23688298 -5316358 + R1_DM LINE R1 3391 4037 -1319 1 765 4958 40 35 0 chrUextra 23688398 23689047 -5315609 + MAX_I LTR Pao 4453 5124 -2790 1 765 2926 170 14 9 chrUextra 23689147 23689795 -5314861 - SAR_DM Satellite Satellite -470 1002 352 1 765 4396 27 9 0 chrUextra 23689896 23690458 -5314198 + PROTOP DNA P 732 1298 -3182 1 765 597 22 44 0 chrUextra 23690455 23690545 -5314111 + PROTOP DNA P 3772 3865 -615 1 765 1666 5 0 0 chrUextra 23690645 23690836 -5313820 - LSU-rRNA_Dme rRNA rRNA -1070 2830 2640 1 765 3935 7 0 0 chrUextra 23690834 23691294 -5313362 - R1_DM LINE R1 0 5356 4897 1 765 934 35 0 0 chrUextra 23691436 23691550 -5313106 - R1_DM LINE R1 0 5356 5243 1 765 4072 22 2 0 chrUextra 23691547 23692043 -5312613 - R1_DM LINE R1 -290 5066 4570 1 765 2834 170 9 11 chrUextra 23692143 23692786 -5311870 + SAR_DM Satellite Satellite 296 937 -535 1 765 25 48 0 46 chrUextra 23692953 23693018 -5311638 + AT_rich Low_complexity Low_complexity 1 62 0 1 765 5093 36 12 5 chrUextra 23693641 23694289 -5310367 - MAX_I LTR Pao -4634 3280 2628 1 765 5439 19 0 0 chrUextra 23694390 23695039 -5309617 + R1_DM LINE R1 1915 2563 -2793 1 765 1199 0 0 0 chrUextra 23695139 23695276 -5309380 + LSU-rRNA_Dme rRNA rRNA 3764 3900 0 1 765 22 56 0 0 chrUextra 23695348 23695384 -5309272 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 246 150 0 0 chrUextra 23695389 23695429 -5309227 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23695481 23695521 -5309135 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23695573 23695613 -5309043 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 230 150 0 0 chrUextra 23695656 23695696 -5308960 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 22 56 0 0 chrUextra 23695709 23695745 -5308911 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 5195 20 0 3 chrUextra 23695888 23696537 -5308119 + NINJA_I LTR Pao 305 951 -5060 1 765 5419 20 0 0 chrUextra 23696637 23697286 -5307370 - R1_DM LINE R1 -1586 3770 3122 1 765 246 150 0 0 chrUextra 23697433 23697473 -5307183 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23697525 23697565 -5307091 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 255 125 0 0 chrUextra 23697608 23697648 -5307008 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 22 56 0 0 chrUextra 23697661 23697697 -5306959 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 870 9 0 27 chrUextra 23697723 23697835 -5306821 + NTS_DM Other Other 25 133 -107 1 765 1212 30 0 6 chrUextra 23697835 23698000 -5306656 + NTS_DM Other Other 38 201 -39 1 765 2707 161 22 34 chrUextra 23698139 23698784 -5305872 - SAR_DM Satellite Satellite -396 1076 440 1 765 2824 173 25 9 chrUextra 23698884 23699533 -5305123 + SAR_DM Satellite Satellite 415 1073 -399 1 765 2390 102 9 23 chrUextra 23699633 23700282 -5304374 + DMSAT6 Satellite Satellite 1 640 -119 1 765 2759 167 11 22 chrUextra 23701136 23701780 -5302876 + SAR_DM Satellite Satellite 332 968 -504 1 765 849 0 32 24 chrUextra 23701880 23702005 -5302651 + NTS_DM Other Other 115 240 0 1 765 1817 4 17 17 chrUextra 23702005 23702245 -5302411 + NTS_DM Other Other 1 240 0 1 765 1290 6 0 18 chrUextra 23702245 23702410 -5302246 + NTS_DM Other Other 1 162 -78 1 765 244 128 0 21 chrUextra 23702829 23702877 -5301779 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 765 351 49 65 16 chrUextra 23702899 23702961 -5301695 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 765 897 173 102 15 chrUextra 23702960 23703165 -5301491 - DMLTR5 LTR Gypsy 0 266 44 1 765 4581 63 1 23 chrUextra 23703378 23704027 -5300629 + R1_DM LINE R1 35 669 -4687 1 765 1620 0 0 0 chrUextra 23704136 23704316 -5300340 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 765 399 157 0 0 chrUextra 23704316 23704386 -5300270 + T-rich Low_complexity Low_complexity 1 70 0 1 765 1180 89 0 11 chrUextra 23704386 23704482 -5300174 + (TTTTC)n Simple_repeat Simple_repeat 1 95 0 1 765 1263 94 0 0 chrUextra 23704482 23704662 -5299994 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 765 1180 89 0 11 chrUextra 23704662 23704747 -5299909 + (TTTTC)n Simple_repeat Simple_repeat 1 85 0 1 765 1026 0 0 0 chrUextra 23705411 23705525 -5299131 + (TCTTG)n Simple_repeat Simple_repeat 5 118 0 1 765 2502 197 34 24 chrUextra 23705631 23706274 -5298382 + SAR_DM Satellite Satellite 1 649 -208 1 765 5622 5 0 0 chrUextra 23706374 23707023 -5297633 + LSU-rRNA_Dme rRNA rRNA 1886 2534 -1366 1 765 4125 8 0 0 chrUextra 23707123 23707611 -5297045 + PROTOP_A DNA P 618 1105 0 1 765 1136 90 12 0 chrUextra 23707611 23707765 -5296891 + DOC3_DM LINE Jockey 1740 1895 -2845 1 765 1158 13 6 67 chrUextra 23707872 23708037 -5296619 - Gypsy4_LTR LTR Gypsy -132 155 1 1 765 1308 107 71 158 chrUextra 23708144 23708466 -5296190 + HOBO DNA hAT 23 316 -2700 1 765 2200 130 12 17 chrUextra 23708621 23709270 -5295386 - DMSAT6 Satellite Satellite -156 646 1 1 765 744 71 32 0 chrUextra 23709519 23709645 -5295011 + PROTOP DNA P 617 746 -3734 1 765 1676 25 0 5 chrUextra 23709649 23709853 -5294803 + PROTOP DNA P 4278 4480 0 1 765 1648 290 14 14 chrUextra 23710119 23710762 -5293894 - G6_DM LINE Jockey -1001 1041 399 1 765 511 290 0 0 chrUextra 23711156 23711332 -5293324 - Copia2_I LTR Copia -97 4065 3890 1 765 598 275 0 0 chrUextra 23711330 23711508 -5293148 - Copia2_I LTR Copia -1373 2789 2612 1 765 1198 48 124 0 chrUextra 23711618 23711827 -5292829 - PROTOP_B DNA P -399 754 520 1 765 1727 58 0 0 chrUextra 23711814 23712040 -5292616 - PROTOP_B DNA P -856 297 73 1 765 186 43 0 0 chrUextra 23712240 23712263 -5292393 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 765 1127 7 7 0 chrUextra 23712366 23712503 -5292153 + R2_DM LINE R2 3470 3607 0 1 765 455 36 0 0 chrUextra 23712504 23712559 -5292097 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 765 3880 2 4 2 chrUextra 23712559 23713015 -5291641 + R1_DM LINE R1 1 457 -4899 1 765 2609 170 50 22 chrUextra 23713115 23713754 -5290902 + SAR_DM Satellite Satellite 281 937 -535 1 765 2559 47 27 31 chrUextra 23714613 23715262 -5289394 + DM176_I LTR Gypsy 239 825 -5595 1 765 2326 261 2 2 chrUextra 23715370 23716011 -5288645 + HMSBEAGLE_I LTR Gypsy 3109 3749 -2780 1 765 246 150 0 0 chrUextra 23716226 23716266 -5288390 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23716318 23716358 -5288298 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 255 125 0 0 chrUextra 23716401 23716441 -5288215 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 22 56 0 0 chrUextra 23716454 23716490 -5288166 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 870 9 0 27 chrUextra 23716516 23716628 -5288028 + NTS_DM Other Other 25 133 -107 1 765 980 23 0 8 chrUextra 23716628 23716760 -5287896 + NTS_DM Other Other 38 168 -72 1 765 5252 22 5 0 chrUextra 23717609 23718252 -5286404 - Gypsy4_I LTR Gypsy -5138 1150 505 1 765 2476 117 129 6 chrUextra 23718358 23719000 -5285656 + TART LINE telomeric 7168 7678 -6799 1 765 771 278 41 35 chrUextra 23719107 23719621 -5285035 + SAR_DM Satellite Satellite 346 1216 -256 1 765 287 261 46 8 chrUextra 23719625 23719652 -5285004 - XDMR_DM Unknown Unknown -211 149 14 1 765 306 269 19 0 chrUextra 23719652 23719756 -5284900 + SAR_DM Satellite Satellite 566 671 -801 1 765 2931 168 11 9 chrUextra 23719861 23720505 -5284151 - SAR_DM Satellite Satellite -416 1056 412 1 765 5116 39 29 1 chrUextra 23721354 23722002 -5282654 + BATUMI_I LTR Pao 4986 5651 -2312 1 765 3891 47 44 9 chrUextra 23722103 23722752 -5281904 - PROTOP DNA P -3727 753 153 1 765 2255 111 31 24 chrUextra 23723079 23723495 -5281161 - Stalker2_I LTR Gypsy -6509 893 475 1 95 2516 199 4 14 chrUextra 23723601 23724208 -5280448 - SAR_DM Satellite Satellite -1093 600 1 1 766 263 54 0 0 chrUextra 23724213 23724250 -5280406 + ARS406_DM Unknown Unknown 90 126 -227 1 766 2837 184 9 8 chrUextra 23724350 23724998 -5279658 - SAR_DM Satellite Satellite -484 988 340 1 766 5483 0 5 1 chrUextra 23725099 23725748 -5278908 + R1_DM LINE R1 1091 1741 -3615 1 766 1945 283 12 8 chrUextra 23725857 23726497 -5278159 - ROVER-I_DM LTR Gypsy -4999 1585 943 1 766 2826 170 13 8 chrUextra 23726602 23727237 -5277419 + SAR_DM Satellite Satellite 321 958 -514 1 766 1314 0 0 0 chrUextra 23727346 23727496 -5277160 + LSU-rRNA_Dme rRNA rRNA 2611 2760 -1140 1 766 4315 6 2 2 chrUextra 23727492 23727995 -5276661 + R2_DM LINE R2 3 505 -3102 1 766 340 176 15 0 chrUextra 23728097 23728165 -5276491 + HETRP_DM Satellite Satellite 1601 1669 -203 1 766 612 199 6 50 chrUextra 23728281 23728440 -5276216 + HETRP_DM Satellite Satellite 1518 1669 -203 1 766 641 193 7 14 chrUextra 23728573 23728715 -5275941 + HETRP_DM Satellite Satellite 1529 1669 -203 1 766 3791 0 0 0 chrUextra 23728844 23729288 -5275368 - ACCORD_I LTR Gypsy -5844 444 1 1 766 1770 0 0 0 chrUextra 23729288 23729493 -5275163 - ACCORD_LTR LTR Gypsy 0 558 354 1 766 1703 21 17 17 chrUextra 23729593 23729830 -5274826 + NTS_DM Other Other 4 240 0 1 766 1756 17 17 17 chrUextra 23729830 23730070 -5274586 + NTS_DM Other Other 1 240 0 1 766 1411 12 0 0 chrUextra 23730070 23730242 -5274414 + NTS_DM Other Other 1 172 -68 1 766 873 0 0 0 chrUextra 23730342 23730439 -5274217 + (TATTG)n Simple_repeat Simple_repeat 4 100 0 1 766 2681 164 14 43 chrUextra 23731092 23731740 -5272916 + SAR_DM Satellite Satellite 195 823 -649 1 766 1733 206 48 26 chrUextra 23731851 23732310 -5272346 - Gypsy12_LTR LTR Gypsy -1867 469 1 1 766 1341 67 0 0 chrUextra 23732310 23732489 -5272167 - Gypsy12_I LTR Gypsy 0 5546 5368 1 766 3437 184 1 1 chrUextra 23732589 23733238 -5271418 - ROVER-I_DM LTR Gypsy -3209 3375 2727 1 766 34 24 0 0 chrUextra 23733852 23733893 -5270763 + AT_rich Low_complexity Low_complexity 1 41 0 1 766 361 114 89 0 chrUextra 23733906 23733985 -5270671 - TART LINE telomeric -3988 10489 10404 1 766 5551 3 11 0 chrUextra 23734087 23734736 -5269920 - Gypsy6_I LTR Gypsy -2832 4180 3525 1 766 1548 176 11 6 chrUextra 23734836 23735485 -5269171 + SAR_DM Satellite Satellite 1 651 -677 1 766 2538 175 35 10 chrUextra 23735585 23736213 -5268443 + SAR_DM Satellite Satellite 209 852 -620 1 766 480 253 41 6 chrUextra 23736060 23736231 -5268425 - XDMR_DM Unknown Unknown -7 353 177 1 766 35 24 0 0 chrUextra 23736597 23736639 -5268017 + AT_rich Low_complexity Low_complexity 1 42 0 1 766 21 95 0 0 chrUextra 23736853 23736916 -5267740 + AT_rich Low_complexity Low_complexity 1 63 0 1 766 459 0 0 0 chrUextra 23736928 23736983 -5267673 + LSU-rRNA_Dme rRNA rRNA 1 55 -3845 1 766 2219 98 5 36 chrUextra 23737083 23737729 -5266927 + DMSAT6 Satellite Satellite 1 625 -3 1 766 5272 31 0 0 chrUextra 23737832 23738481 -5266175 - R1_DM LINE R1 -2435 2921 2273 1 766 2783 183 6 8 chrUextra 23738590 23739230 -5265426 - SAR_DM Satellite Satellite -396 1076 438 1 766 5245 8 0 1 chrUextra 23739332 23739979 -5264677 + Invader2_I LTR Gypsy 3757 4402 -190 1 766 5499 8 1 0 chrUextra 23740079 23740728 -5263928 - DM176_I LTR Gypsy -5192 1228 579 1 766 1120 273 34 30 chrUextra 23740832 23741476 -5263180 - SAR_DM Satellite Satellite -256 1216 235 1 766 834 10 0 0 chrUextra 23741583 23741684 -5262972 - R2_DM LINE R2 -3506 101 1 1 766 4578 7 0 0 chrUextra 23741683 23742225 -5262431 - R1_DM LINE R1 -2403 2953 2412 1 766 2783 173 19 17 chrUextra 23742325 23742972 -5261684 - SAR_DM Satellite Satellite -405 1067 420 1 766 5417 11 0 0 chrUextra 23743073 23743721 -5260935 + BLOOD_I LTR Gypsy 1833 2480 -4133 1 766 3661 5 7 2 chrUextra 23743823 23744263 -5260393 + LSU-rRNA_Dme rRNA rRNA 1347 1788 -2112 1 766 1427 0 0 0 chrUextra 23744307 23744469 -5260187 + LSU-rRNA_Dme rRNA rRNA 1788 1949 -1951 1 766 3821 9 0 0 chrUextra 23744569 23745033 -5259623 - R1_DM LINE R1 -4378 978 515 1 766 1617 0 11 0 chrUextra 23745030 23745217 -5259439 - LSU-rRNA_Dme rRNA rRNA -1252 2648 2460 1 766 690 232 134 0 chrUextra 23745741 23745965 -5258691 - LINEJ1_DM LINE Jockey -213 4807 4554 1 766 446 39 52 0 chrUextra 23746065 23746142 -5258514 + (TA)n Simple_repeat Simple_repeat 1 81 0 1 766 248 133 22 0 chrUextra 23746221 23746266 -5258390 + DM176_LTR LTR Gypsy 224 269 -238 1 766 254 190 17 0 chrUextra 23746387 23746445 -5258211 + DM176_LTR LTR Gypsy 308 366 -141 1 766 571 148 40 16 chrUextra 23746462 23746586 -5258070 + DMTOM1_LTR LTR Gypsy 284 410 0 1 766 391 113 0 27 chrUextra 23746586 23746650 -5258006 + DMTOM1_LTR LTR Gypsy 349 410 0 1 766 4251 21 2 0 chrUextra 23746813 23747330 -5257326 + R1_DM LINE R1 4549 5066 -290 1 766 904 35 0 9 chrUextra 23747327 23747442 -5257214 + R1_DM LINE R1 5243 5356 0 1 766 4393 52 65 9 chrUextra 23747561 23748205 -5256451 + R1_DM LINE R1 391 1070 -4286 1 766 5523 3 11 1 chrUextra 23748309 23748957 -5255699 - TART LINE telomeric -10945 3532 2879 1 766 5187 22 1 12 chrUextra 23749057 23749705 -5254951 - R1_DM LINE R1 -1863 3493 2853 1 766 1983 0 0 4 chrUextra 23749805 23750034 -5254622 + SSU-rRNA_Dme rRNA rRNA 1768 1995 0 1 766 21 89 0 0 chrUextra 23750053 23750109 -5254547 + AT_rich Low_complexity Low_complexity 1 56 0 1 766 4714 40 1 25 chrUextra 23750553 23751201 -5253455 - BATUMI_I LTR Pao -4620 3343 2711 1 766 23 50 0 48 chrUextra 23751780 23751843 -5252813 + AT_rich Low_complexity Low_complexity 1 60 0 1 766 2607 173 33 9 chrUextra 23752066 23752696 -5251960 - SAR_DM Satellite Satellite -396 1076 432 1 766 2694 169 31 16 chrUextra 23752797 23753444 -5251212 + SAR_DM Satellite Satellite 239 895 -577 1 766 254 0 0 0 chrUextra 23753545 23753578 -5251078 + Copia2_I LTR Copia 1842 1874 -2288 1 766 260 116 25 127 chrUextra 23754021 23754100 -5250556 + TIRANT_I LTR Gypsy 1 71 -7621 1 766 5382 25 0 1 chrUextra 23754293 23754940 -5249716 + DIVER_I LTR Pao 2088 2733 -2910 1 766 5497 9 0 0 chrUextra 23755041 23755689 -5248967 + R1_DM LINE R1 4566 5213 -143 1 766 5556 0 1 5 chrUextra 23755789 23756437 -5248219 + SSU-rRNA_Dme rRNA rRNA 1019 1664 -331 1 766 5189 16 20 0 chrUextra 23756538 23757185 -5247471 + LSU-rRNA_Dme rRNA rRNA 264 923 -2977 1 766 1041 97 0 2 chrUextra 23757285 23757932 -5246724 + (CAAGA)n Simple_repeat Simple_repeat 1 645 0 1 766 2089 209 82 29 chrUextra 23758033 23758675 -5245981 + SAR_DM Satellite Satellite 1 675 -216 1 766 2524 189 10 8 chrUextra 23758781 23759404 -5245252 - SAR_DM Satellite Satellite -669 803 180 1 766 834 92 0 0 chrUextra 23759298 23759429 -5245227 + ARS406_DM Unknown Unknown 1 131 -222 1 766 2560 9 28 0 chrUextra 23759529 23759850 -5244806 + Invader3_I LTR Gypsy 4559 4888 0 1 766 1605 89 6 110 chrUextra 23759850 23760177 -5244479 + Invader3_LTR LTR Gypsy 1 293 -5 1 766 1620 0 0 4 chrUextra 23760282 23760515 -5244141 + (CAAGA)n Simple_repeat Simple_repeat 1 231 0 1 766 2575 196 19 9 chrUextra 23761025 23761665 -5242991 + SAR_DM Satellite Satellite 430 1075 -397 1 766 2344 88 144 56 chrUextra 23761773 23762253 -5242403 + MAX_I LTR Pao 46 567 -7347 1 766 4648 0 0 0 chrUextra 23762637 23763169 -5241487 + DMRT1B LINE R1 1 532 -4651 1 766 2883 189 10 18 chrUextra 23763269 23763911 -5240745 - ROVER-I_DM LTR Gypsy -2546 4038 3485 1 766 5477 6 0 0 chrUextra 23764017 23764665 -5239991 - ROO_I LTR Pao -6088 2168 1521 1 766 5548 5 1 0 chrUextra 23764765 23765413 -5239243 - R1_DM LINE R1 -361 4995 4347 1 766 5136 23 3 3 chrUextra 23765513 23766161 -5238495 + NINJA_I LTR Pao 4060 4707 -1304 1 766 1620 13 0 0 chrUextra 23766264 23766569 -5238087 + (TTATA)n Simple_repeat Simple_repeat 1 305 0 1 766 2437 6 0 38 chrUextra 23766569 23766909 -5237747 - DOC LINE Jockey -5 4720 4394 1 766 4660 45 11 6 chrUextra 23767009 23767657 -5236999 + IDEFIX_I LTR Gypsy 3113 3763 -1865 1 766 1089 289 27 31 chrUextra 23767768 23768391 -5236265 - SAR_DM Satellite Satellite -640 620 1 1 766 1019 286 36 31 chrUextra 23769259 23769862 -5234794 - SAR_DM Satellite Satellite -439 1033 428 1 766 5561 3 0 0 chrUextra 23770001 23770649 -5234007 + R1_DM LINE R1 2870 3517 -1839 1 766 5673 0 1 0 chrUextra 23770749 23771397 -5233259 - LSU-rRNA_Dme rRNA rRNA -475 3425 2777 1 766 49 43 0 0 chrUextra 23771755 23771825 -5232831 + AT_rich Low_complexity Low_complexity 1 70 0 1 766 4929 45 22 0 chrUextra 23772245 23772893 -5231763 + IDEFIX_I LTR Gypsy 1701 2362 -3266 1 766 2267 0 0 4 chrUextra 23773008 23773285 -5231371 + Copia_LTR LTR Copia 1 276 0 1 766 2999 6 3 0 chrUextra 23773285 23773641 -5231015 + Copia_I LTR Copia 1 357 -4236 1 766 5241 20 0 1 chrUextra 23773741 23774389 -5230267 - DMRT1A LINE R1 -3890 1293 647 1 766 239 19 0 153 chrUextra 23775010 23775134 -5229522 + (GATTG)n Simple_repeat Simple_repeat 3 107 0 1 766 375 107 0 0 chrUextra 23775985 23776041 -5228615 + TART LINE telomeric 3974 4029 -10448 1 766 1925 143 59 39 chrUextra 23776012 23776614 -5228042 + TART LINE telomeric 4698 5239 -9238 1 766 2560 158 17 6 chrUextra 23776735 23777264 -5227392 + SAR_DM Satellite Satellite 369 903 -569 1 766 751 64 0 0 chrUextra 23777271 23777380 -5227276 - ARS406_DM Unknown Unknown -195 158 50 1 766 34 24 0 0 chrUextra 23777591 23777632 -5227024 + AT_rich Low_complexity Low_complexity 1 41 0 1 766 2745 65 6 6 chrUextra 23778229 23778588 -5226068 - R1_DM LINE R1 -4997 359 1 1 766 2310 8 0 0 chrUextra 23778621 23778877 -5225779 - R1_DM LINE R1 0 5356 5101 1 766 302 219 27 14 chrUextra 23778997 23779071 -5225585 + HETRP_DM Satellite Satellite 1601 1675 -197 1 766 294 29 0 0 chrUextra 23779197 23779232 -5225424 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 766 505 209 8 17 chrUextra 23779232 23779349 -5225307 + HETRP_DM Satellite Satellite 1549 1664 -208 1 766 543 204 0 9 chrUextra 23779516 23779625 -5225031 + HETRP_DM Satellite Satellite 1529 1636 -236 1 766 1357 67 6 0 chrUextra 23779732 23779910 -5224746 - R1_DM LINE R1 -5177 179 1 1 766 3734 16 9 0 chrUextra 23779943 23780373 -5224283 - R1_DM LINE R1 0 5356 4923 1 766 2846 36 72 3 chrUextra 23780739 23780874 -5223782 + DMRT1B LINE R1 1 141 -5042 1 766 180 0 0 0 chrUextra 23780874 23780894 -5223762 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 766 2846 36 72 3 chrUextra 23780894 23781121 -5223535 + DMRT1B LINE R1 142 386 -4797 1 766 3877 2 0 2 chrUextra 23781339 23781768 -5222888 - ROO_LTR LTR Pao 0 428 1 1 766 884 0 0 0 chrUextra 23781768 23781869 -5222787 - ROO_I LTR Pao 0 8256 8156 1 766 582 309 0 6 chrUextra 23781977 23782159 -5222497 + Invader6_I LTR Gypsy 2861 3041 -1058 1 766 32 0 0 0 chrUextra 23782160 23782192 -5222464 + AT_rich Low_complexity Low_complexity 1 32 0 1 766 896 330 3 3 chrUextra 23782200 23782534 -5222122 + MICROPIA_I LTR Gypsy 3265 3598 -878 1 766 5705 12 6 0 chrUextra 23782717 23783365 -5221291 + DMRT1B LINE R1 4506 5157 -26 1 766 364 220 105 0 chrUextra 23783578 23784113 -5220543 + (CAAGA)n Simple_repeat Simple_repeat 1 591 0 1 766 344 211 106 0 chrUextra 23783878 23784039 -5220617 + A-rich Low_complexity Low_complexity 3 180 0 1 766 3556 140 29 8 chrUextra 23784214 23784861 -5219795 - TART LINE telomeric -4860 9617 8957 1 766 1895 191 5 6 chrUextra 23784964 23785608 -5219048 + SAR_DM Satellite Satellite 1 642 -558 1 766 5222 28 48 1 chrUextra 23785709 23786357 -5218299 - R1_DM LINE R1 -868 4488 3811 1 766 5409 14 0 0 chrUextra 23786457 23787105 -5217551 + QUASIMODO_I LTR Gypsy 4733 5380 -680 1 766 1770 189 14 5 chrUextra 23787207 23787853 -5216803 - SAR_DM Satellite Satellite -708 652 1 1 766 5242 11 11 1 chrUextra 23787953 23788601 -5216055 + DM176_I LTR Gypsy 918 1571 -4849 1 766 5208 9 52 0 chrUextra 23788701 23789349 -5215307 - DOC2_DM LINE Jockey -624 4169 3488 1 766 3166 171 11 6 chrUextra 23789449 23790097 -5214559 - SAR_DM Satellite Satellite -470 1002 352 1 766 520 245 0 0 chrUextra 23790252 23790584 -5214072 + (TAAA)n Simple_repeat Simple_repeat 1 332 0 1 766 279 125 236 0 chrUextra 23790555 23790843 -5213813 + (CTAAA)n Simple_repeat Simple_repeat 1 355 0 1 766 5856 1 0 0 chrUextra 23790945 23791593 -5213063 + R1_DM LINE R1 1339 1986 -3370 1 766 1617 218 74 55 chrUextra 23791698 23792341 -5212315 - SAR_DM Satellite Satellite -478 655 1 1 766 3026 172 11 9 chrUextra 23792441 23793079 -5211577 + SAR_DM Satellite Satellite 438 1076 -396 1 766 306 0 0 0 chrUextra 23793189 23793223 -5211433 + (TTCTC)n Simple_repeat Simple_repeat 2 35 0 1 766 1142 119 0 18 chrUextra 23793223 23793564 -5211092 + (CTATT)n Simple_repeat Simple_repeat 1 335 0 1 766 306 0 0 0 chrUextra 23793566 23793600 -5211056 + (TTCTC)n Simple_repeat Simple_repeat 2 35 0 1 766 989 58 7 18 chrUextra 23793960 23794545 -5210111 + RSP Satellite Satellite 1 578 0 1 766 850 135 0 0 chrUextra 23794809 23794935 -5209721 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 1 766 1039 183 36 18 chrUextra 23795023 23795246 -5209410 + DMLTR5 LTR Gypsy 40 266 0 1 766 37 39 0 0 chrUextra 23795775 23795826 -5208830 + AT_rich Low_complexity Low_complexity 1 51 0 1 766 22 35 0 0 chrUextra 23795927 23795956 -5208700 + AT_rich Low_complexity Low_complexity 1 29 0 1 766 5721 20 0 0 chrUextra 23796181 23796829 -5207827 - MAX_I LTR Pao -3379 4535 3888 1 766 2818 181 11 19 chrUextra 23796929 23797577 -5207079 + SAR_DM Satellite Satellite 457 1099 -373 1 766 3032 20 0 3 chrUextra 23797688 23798045 -5206611 - MDG1_LTR LTR Gypsy 0 442 87 1 766 423 100 0 0 chrUextra 23798045 23798115 -5206541 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 766 241 0 0 0 chrUextra 23798425 23798452 -5206204 + DOC2_DM LINE Jockey 1261 1287 -3506 1 766 5402 17 8 2 chrUextra 23798439 23799073 -5205583 + DOC2_DM LINE Jockey 1667 2304 -2489 1 766 5354 0 17 6 chrUextra 23799173 23799821 -5204835 + MAX_I LTR Pao 584 1238 -6676 1 766 609 198 0 16 chrUextra 23799921 23800049 -5204607 - HETRP_DM Satellite Satellite -218 1654 1529 1 766 702 186 14 14 chrUextra 23800188 23800335 -5204321 - HETRP_DM Satellite Satellite -197 1675 1529 1 766 319 245 19 19 chrUextra 23800465 23800569 -5204087 - HETRP_DM Satellite Satellite -197 1675 1572 1 766 2433 181 6 9 chrUextra 23800669 23800687 -5203969 + SAR_DM Satellite Satellite 1 20 -1183 1 766 831 30 0 0 chrUextra 23800687 23800787 -5203869 - ARS406_DM Unknown Unknown -164 189 90 1 766 2433 181 6 9 chrUextra 23800787 23801317 -5203339 + SAR_DM Satellite Satellite 21 645 -558 1 766 5780 0 1 0 chrUextra 23801417 23802065 -5202591 + TABOR_I LTR Gypsy 247 895 -5441 1 766 557 22 0 193 chrUextra 23802165 23802276 -5202380 - BATUMI_I LTR Pao -873 7090 7002 1 766 4675 6 0 6 chrUextra 23802276 23802813 -5201843 - BATUMI_I LTR Pao 0 7963 7430 1 766 1472 185 22 6 chrUextra 23802913 23803560 -5201096 + SAR_DM Satellite Satellite 1 657 -749 1 766 3126 172 8 5 chrUextra 23803661 23804292 -5200364 - SAR_DM Satellite Satellite -594 878 246 1 766 346 266 39 24 chrUextra 23804182 23804309 -5200347 + XDMR Unknown Unknown 1 129 -232 1 766 3080 161 19 9 chrUextra 23804414 23805046 -5199610 - SAR_DM Satellite Satellite -514 958 321 1 766 1349 158 8 24 chrUextra 23805158 23805405 -5199251 - Gypsy12_LTR LTR Gypsy -2093 243 1 1 766 3083 75 10 2 chrUextra 23805404 23805803 -5198853 - Gypsy12_I LTR Gypsy 0 5546 5145 1 766 435 38 0 0 chrUextra 23806500 23806553 -5198103 + (GAGAA)n Simple_repeat Simple_repeat 1 53 0 1 766 1304 18 0 6 chrUextra 23806653 23806818 -5197838 - NTS_DM Other Other -39 201 38 1 766 883 18 0 27 chrUextra 23806818 23806930 -5197726 - NTS_DM Other Other -107 133 25 1 766 1274 18 0 12 chrUextra 23806982 23807148 -5197508 - NTS_DM Other Other -39 201 38 1 766 907 9 0 27 chrUextra 23807148 23807260 -5197396 - NTS_DM Other Other -107 133 25 1 766 3607 28 65 2 chrUextra 23807401 23808049 -5196607 + R1_DM LINE R1 3191 3879 -1477 1 766 1203 287 18 18 chrUextra 23808897 23809355 -5195301 - ROVER-I_DM LTR Gypsy -3535 3049 2592 1 766 1399 18 6 6 chrUextra 23809349 23809517 -5195139 + TLD3 Unknown Unknown 2 169 -3 1 766 392 271 96 6 chrUextra 23809655 23809833 -5194823 + DM176_I LTR Gypsy 5756 5949 -471 1 766 1010 147 127 49 chrUextra 23809821 23810129 -5194527 - STALKER4_I LTR Gypsy -5373 1157 826 1 766 734 186 36 0 chrUextra 23810126 23810293 -5194363 + DM297_I LTR Gypsy 4336 4508 -1659 1 766 5801 5 0 0 chrUextra 23810393 23811041 -5193615 + R1_DM LINE R1 2980 3627 -1729 1 766 959 19 0 0 chrUextra 23811141 23811249 -5193407 + 5S_DM RNA RNA 28 135 0 1 766 1205 7 0 0 chrUextra 23811483 23811618 -5193038 + 5S_DM RNA RNA 1 135 0 1 766 418 303 38 38 chrUextra 23812226 23812464 -5192192 + Gypsy3_I LTR Gypsy 1179 1365 -4812 1 766 2816 178 18 13 chrUextra 23812638 23813265 -5191391 - SAR_DM Satellite Satellite -645 827 198 1 766 650 127 0 0 chrUextra 23813175 23813285 -5191371 + ARS406_DM Unknown Unknown 1 110 -243 1 766 21 36 0 0 chrUextra 23813433 23813461 -5191195 + AT_rich Low_complexity Low_complexity 1 28 0 1 766 1291 19 0 6 chrUextra 23813463 23813626 -5191030 - NTS_DM Other Other -41 199 38 1 766 907 9 0 27 chrUextra 23813626 23813738 -5190918 - NTS_DM Other Other -107 133 25 1 766 1278 30 0 6 chrUextra 23813790 23813955 -5190701 - NTS_DM Other Other -39 201 38 1 766 604 26 0 0 chrUextra 23813955 23814033 -5190623 - NTS_DM Other Other -107 133 56 1 766 22 56 0 0 chrUextra 23814257 23814293 -5190363 + AT_rich Low_complexity Low_complexity 1 36 0 1 766 356 167 42 92 chrUextra 23814338 23814457 -5190199 + Copia_I LTR Copia 4401 4513 -80 1 766 1866 174 6 14 chrUextra 23814883 23815529 -5189127 + SAR_DM Satellite Satellite 1 640 -558 1 766 933 79 6 18 chrUextra 23815629 23816275 -5188381 - RSP Satellite Satellite -55 638 1 1 766 5541 23 6 1 chrUextra 23816377 23817025 -5187631 + R2_DM LINE R2 2001 2651 -956 1 766 540 181 128 0 chrUextra 23817125 23817258 -5187398 - ARS406_DM Unknown Unknown -203 150 1 1 766 2586 191 28 13 chrUextra 23817155 23817772 -5186884 + SAR_DM Satellite Satellite 185 810 -662 1 766 3445 236 45 28 chrUextra 23817879 23819234 -5185422 - SAR_DM Satellite Satellite -382 1378 1 1 766 878 263 23 13 chrUextra 23818968 23819269 -5185387 + XDMR_DM Unknown Unknown 6 309 -51 1 766 5681 11 0 0 chrUextra 23820117 23820765 -5183891 + Invader2_I LTR Gypsy 983 1630 -2962 1 766 2442 108 23 5 chrUextra 23820865 23821511 -5183145 - DMSAT6 Satellite Satellite -113 658 1 1 766 3590 33 0 0 chrUextra 23821613 23822035 -5182621 + R1_DM LINE R1 1407 1828 -3528 1 766 1837 44 0 9 chrUextra 23822033 23822261 -5182395 + R1_DM LINE R1 1317 1542 -3814 1 766 5636 1 0 0 chrUextra 23822361 23823009 -5181647 - ROO_I LTR Pao -4189 4067 3420 1 766 1349 28 22 0 chrUextra 23823109 23823288 -5181368 - Stalker2_I LTR Gypsy -5646 1756 1574 1 766 2120 33 11 0 chrUextra 23823487 23823757 -5180899 - Stalker2_I LTR Gypsy -5810 1592 1320 1 766 5608 25 0 1 chrUextra 23823857 23824505 -5180151 - R1_DM LINE R1 -1549 3807 3161 1 766 2845 189 9 9 chrUextra 23824610 23825250 -5179406 + SAR_DM Satellite Satellite 437 1076 -396 1 766 220 141 46 15 chrUextra 23826107 23826172 -5178484 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 766 22 35 0 0 chrUextra 23826460 23826489 -5178167 + AT_rich Low_complexity Low_complexity 1 29 0 1 766 58 15 0 0 chrUextra 23826664 23826729 -5177927 + AT_rich Low_complexity Low_complexity 1 65 0 1 766 1835 179 25 10 chrUextra 23826849 23826863 -5177793 + SAR_DM Satellite Satellite 1 16 -1079 1 766 647 45 56 0 chrUextra 23826863 23826952 -5177704 - ARS406_DM Unknown Unknown -164 189 96 1 766 1835 179 25 10 chrUextra 23826952 23827367 -5177289 + SAR_DM Satellite Satellite 17 526 -569 1 766 824 81 8 0 chrUextra 23827373 23827497 -5177159 - ARS406_DM Unknown Unknown -194 159 35 1 766 4268 18 0 46 chrUextra 23827597 23828136 -5176520 - LSU-rRNA_Dme rRNA rRNA -3386 514 1 1 766 21 95 0 0 chrUextra 23828148 23828211 -5176445 + AT_rich Low_complexity Low_complexity 1 63 0 1 766 2139 0 0 91 chrUextra 23828345 23828630 -5176026 - LSU-rRNA_Dme rRNA rRNA -3641 259 1 1 766 21 95 0 0 chrUextra 23828642 23828705 -5175951 + AT_rich Low_complexity Low_complexity 1 63 0 1 766 34 24 0 0 chrUextra 23828918 23828959 -5175697 + AT_rich Low_complexity Low_complexity 1 41 0 1 766 2954 6 0 0 chrUextra 23829093 23829449 -5175207 - DM176_I LTR Gypsy -11 6409 6054 1 766 2276 29 0 16 chrUextra 23829423 23829741 -5174915 - DM176_I LTR Gypsy -520 5900 5588 1 766 3017 158 14 13 chrUextra 23829861 23830489 -5174167 + SAR_DM Satellite Satellite 326 954 -518 1 766 2633 87 20 9 chrUextra 23830589 23831237 -5173419 + DMSAT6 Satellite Satellite 1 655 -64 1 766 5619 0 0 3 chrUextra 23832085 23832733 -5171923 + ROO_I LTR Pao 4705 5350 -2906 1 766 3052 170 8 9 chrUextra 23832833 23833464 -5171192 + SAR_DM Satellite Satellite 447 1076 -396 1 766 1105 48 18 12 chrUextra 23834019 23834187 -5170469 + (GAGAA)n Simple_repeat Simple_repeat 1 169 0 1 766 4975 30 2 6 chrUextra 23834336 23834977 -5169679 + PROTOP_A DNA P 1 638 -467 1 766 5414 1 0 0 chrUextra 23835077 23835725 -5168931 + DM176_I LTR Gypsy 1418 2065 -4355 1 766 5591 3 0 0 chrUextra 23836573 23837221 -5167435 - FW_DM LINE Jockey -905 3787 3140 1 766 667 149 149 55 chrUextra 23837321 23837576 -5167080 + STALKER4_I LTR Gypsy 885 1163 -5367 1 766 3127 5 0 5 chrUextra 23837574 23837968 -5166688 + STALKER4_I LTR Gypsy 1271 1662 -4868 1 766 5565 1 0 0 chrUextra 23838068 23838715 -5165941 + ROO_I LTR Pao 4935 5581 -2675 1 766 5372 9 1 3 chrUextra 23838815 23839462 -5165194 - R1_DM LINE R1 -1098 4258 3613 1 766 423 101 0 0 chrUextra 23839562 23839631 -5165025 - ARS406_DM Unknown Unknown -284 69 1 1 766 2838 180 8 3 chrUextra 23839569 23840205 -5164451 + SAR_DM Satellite Satellite 224 862 -610 1 766 3593 40 0 2 chrUextra 23840486 23840956 -5163700 + IDEFIX_I LTR Gypsy 1 469 -5159 1 766 2731 179 11 12 chrUextra 23841058 23841699 -5162957 - SAR_DM Satellite Satellite -587 885 246 1 766 1069 20 13 7 chrUextra 23841803 23841955 -5162701 + NTS_DM Other Other 49 201 -39 1 766 870 9 0 27 chrUextra 23842007 23842119 -5162537 + NTS_DM Other Other 25 133 -107 1 766 1252 18 0 6 chrUextra 23842119 23842284 -5162372 + NTS_DM Other Other 38 201 -39 1 766 848 18 0 27 chrUextra 23842336 23842448 -5162208 + NTS_DM Other Other 25 133 -107 1 766 5183 30 0 2 chrUextra 23842552 23843197 -5161459 + R1_DM LINE R1 3152 3795 -1561 1 766 25 0 0 0 chrUextra 23843386 23843411 -5161245 + AT_rich Low_complexity Low_complexity 1 25 0 1 766 924 192 61 0 chrUextra 23844044 23844273 -5160383 - DNAREP1_DM LINE Penelope -351 243 1 1 766 3081 202 9 5 chrUextra 23844791 23845428 -5159228 + Gypsy2_I LTR Gypsy 5135 5774 -361 1 766 5220 28 3 1 chrUextra 23845538 23846185 -5158471 + MAX_I LTR Pao 4375 5022 -2892 1 766 2683 174 21 21 chrUextra 23846288 23846912 -5157744 + SAR_DM Satellite Satellite 246 869 -603 1 766 478 231 30 42 chrUextra 23846763 23846930 -5157726 - XDMR Unknown Unknown 0 361 197 1 766 1025 0 0 0 chrUextra 23847779 23847903 -5156753 - QUASIMODO_LTR LTR Gypsy -534 124 1 1 766 531 0 0 0 chrUextra 23847903 23847972 -5156684 + TABOR_I LTR Gypsy 6268 6336 0 1 766 3976 4 0 0 chrUextra 23847970 23848426 -5156230 + TABOR_LTR LTR Gypsy 1 456 -50 1 766 1932 4 0 4 chrUextra 23848526 23848753 -5155903 + LSU-rRNA_Dme rRNA rRNA 3675 3900 0 1 766 22 56 0 0 chrUextra 23848825 23848861 -5155795 + AT_rich Low_complexity Low_complexity 1 36 0 1 766 246 150 0 0 chrUextra 23848866 23848906 -5155750 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 766 246 150 0 0 chrUextra 23848958 23848998 -5155658 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 766 246 150 0 0 chrUextra 23849050 23849090 -5155566 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 766 1129 107 6 0 chrUextra 23849274 23849452 -5155204 - DNAREP1_DM LINE Penelope -415 179 1 1 766 877 126 3 0 chrUextra 23849747 23849920 -5154736 - DNAREP1_DM LINE Penelope -234 360 60 1 766 29 28 0 0 chrUextra 23850496 23850532 -5154124 + AT_rich Low_complexity Low_complexity 1 36 0 1 766 666 179 14 14 chrUextra 23850830 23850977 -5153679 - HETRP_DM Satellite Satellite -197 1675 1529 1 766 655 186 7 14 chrUextra 23851119 23851261 -5153395 - HETRP_DM Satellite Satellite -203 1669 1529 1 766 5601 1 0 1 chrUextra 23851514 23852161 -5152495 - LSU-rRNA_Dme rRNA rRNA -1348 2552 1907 1 766 3239 99 70 34 chrUextra 23852261 23852908 -5151748 + STALKER4_I LTR Gypsy 609 1278 -5252 1 766 5271 9 3 3 chrUextra 23853020 23853655 -5151001 + G_DM LINE Jockey 1342 1976 -2370 1 766 4287 4 0 0 chrUextra 23853755 23854249 -5150407 + LSU-rRNA_Dme rRNA rRNA 2149 2642 -1258 1 766 1306 6 6 6 chrUextra 23854241 23854402 -5150254 + R1_DM LINE R1 3726 3886 -1470 1 766 292 192 20 20 chrUextra 23854502 23854603 -5150053 + XDMR_DM Unknown Unknown 260 360 0 1 95 2449 183 11 27 chrUextra 23854516 23855149 -5149507 - SAR_DM Satellite Satellite -352 1120 498 1 767 2805 174 16 11 chrUextra 23855252 23855893 -5148763 + SAR_DM Satellite Satellite 252 895 -577 1 767 5464 5 0 2 chrUextra 23855996 23856636 -5148020 + DOC LINE Jockey 2084 2722 -2003 1 767 5245 31 0 0 chrUextra 23856743 23857390 -5147266 + R1_DM LINE R1 2383 3029 -2327 1 767 5343 3 1 0 chrUextra 23857490 23858137 -5146519 + ROO_I LTR Pao 760 1407 -6849 1 767 5539 0 0 0 chrUextra 23858237 23858884 -5145772 + BLOOD_I LTR Gypsy 2564 3210 -3403 1 767 5481 17 0 0 chrUextra 23858984 23859631 -5145025 - DOC2_DM LINE Jockey -461 4332 3686 1 767 5256 30 0 3 chrUextra 23859731 23860378 -5144278 - R1_DM LINE R1 -481 4875 4231 1 767 3420 0 0 2 chrUextra 23860478 23860872 -5143784 + LSU-rRNA_Dme rRNA rRNA 2262 2654 -1246 1 767 1893 0 9 0 chrUextra 23860901 23861125 -5143531 + R1_DM LINE R1 1 226 -5130 1 767 2616 179 16 25 chrUextra 23861225 23861871 -5142785 + SAR_DM Satellite Satellite 461 1100 -372 1 767 822 18 0 35 chrUextra 23861980 23862093 -5142563 - NTS_DM Other Other -107 133 25 1 767 1252 18 0 6 chrUextra 23862145 23862310 -5142346 - NTS_DM Other Other -39 201 38 1 767 840 9 0 35 chrUextra 23862310 23862423 -5142233 - NTS_DM Other Other -107 133 25 1 767 1019 21 0 7 chrUextra 23862475 23862619 -5142037 - NTS_DM Other Other -39 201 59 1 767 4385 44 23 9 chrUextra 23862719 23863366 -5141290 + DM176_I LTR Gypsy 384 1039 -5381 1 767 1419 136 14 195 chrUextra 23863466 23864113 -5140543 - BATUMI_I LTR Pao -6889 1074 545 1 767 471 113 0 0 chrUextra 23864213 23864282 -5140374 - S_DM DNA Tc1 -685 1051 983 1 767 4773 14 0 0 chrUextra 23864282 23864860 -5139796 - PROTOP_A DNA P 0 1105 528 1 767 5554 3 0 0 chrUextra 23865707 23866354 -5138302 - DM1731_I LTR Copia -1421 2555 1909 1 767 28 48 0 0 chrUextra 23866728 23866770 -5137886 + AT_rich Low_complexity Low_complexity 1 42 0 1 767 438 173 135 0 chrUextra 23866840 23866944 -5137712 - DNAREP1_DM LINE Penelope -31 563 446 1 767 4460 30 5 59 chrUextra 23867202 23867848 -5136808 + BATUMI_I LTR Pao 2517 3127 -4836 1 767 5313 19 2 2 chrUextra 23868697 23869342 -5135314 - NINJA_I LTR Pao -2674 3337 2693 1 767 2567 60 6 6 chrUextra 23869444 23869795 -5134861 - R1_DM LINE R1 -5005 351 1 1 767 2213 8 0 4 chrUextra 23869829 23870089 -5134567 - R1_DM LINE R1 0 5356 5098 1 767 459 0 137 0 chrUextra 23870191 23870322 -5134334 + (TA)n Simple_repeat Simple_repeat 1 149 0 1 767 4490 0 0 0 chrUextra 23870322 23870836 -5133820 - NOMAD_LTR LTR Gypsy 0 518 5 1 767 198 0 0 0 chrUextra 23871033 23871055 -5133601 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 767 5612 1 0 3 chrUextra 23871683 23872330 -5132326 + SSU-rRNA_Dme rRNA rRNA 68 712 -1283 1 767 5385 0 0 0 chrUextra 23872431 23873077 -5131579 + ROO_I LTR Pao 560 1205 -7051 1 767 367 0 0 0 chrUextra 23873177 23873223 -5131433 + DM176_LTR LTR Gypsy 462 507 0 1 767 4283 8 0 0 chrUextra 23873234 23873741 -5130915 + DM176_LTR LTR Gypsy 1 507 0 1 767 672 0 12 0 chrUextra 23873741 23873824 -5130832 + DM176_I LTR Gypsy 1 84 -6336 1 767 1567 28 14 22 chrUextra 23874671 23874894 -5129762 - NTS_DM Other Other -19 221 1 1 767 1737 21 17 17 chrUextra 23874894 23875134 -5129522 - NTS_DM Other Other 0 240 1 1 767 1204 22 22 22 chrUextra 23875134 23875318 -5129338 - NTS_DM Other Other 0 240 57 1 767 2750 160 23 17 chrUextra 23875418 23876061 -5128595 + SAR_DM Satellite Satellite 206 852 -620 1 767 490 0 0 0 chrUextra 23876165 23876237 -5128419 + HMSBEAGLE_I LTR Gypsy 716 787 -5742 1 767 974 29 52 12 chrUextra 23876252 23876424 -5128232 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 767 3128 3 5 8 chrUextra 23876424 23876812 -5127844 + HMSBEAGLE_I LTR Gypsy 969 1355 -5174 1 767 1986 175 8 25 chrUextra 23876914 23877369 -5127287 + SAR_DM Satellite Satellite 1 590 -600 1 767 1031 89 0 0 chrUextra 23877369 23877527 -5127129 - ARS406_DM Unknown Unknown -195 158 1 1 767 1986 175 8 25 chrUextra 23877527 23877558 -5127098 + SAR_DM Satellite Satellite 591 632 -558 1 767 4449 15 0 0 chrUextra 23877666 23878193 -5126463 - R1_DM LINE R1 -804 4552 4026 1 767 778 10 0 48 chrUextra 23878203 23878306 -5126350 - R1_DM LINE R1 -1690 3666 3569 1 767 1249 99 142 4 chrUextra 23878406 23878639 -5126017 + MDG1_I LTR Gypsy 1272 1536 -5060 1 767 827 80 0 0 chrUextra 23878633 23878758 -5125898 + MDG1_I LTR Gypsy 2539 2663 -3933 1 767 2420 17 7 0 chrUextra 23878760 23879053 -5125603 + ROO_LTR LTR Pao 1 295 -133 1 767 2040 16 59 0 chrUextra 23879153 23879409 -5125247 - IVK_DM LINE I -5131 271 1 1 767 360 0 0 0 chrUextra 23879410 23879450 -5125206 + (A)n Simple_repeat Simple_repeat 1 40 0 1 767 1554 157 20 20 chrUextra 23879450 23879795 -5124861 - SAR_DM Satellite Satellite -416 1056 712 1 767 5068 9 14 0 chrUextra 23879906 23880547 -5124109 - Stalker2_I LTR Gypsy -6254 1148 499 1 767 631 287 49 29 chrUextra 23880649 23881141 -5123515 + SAR_DM Satellite Satellite 331 832 -640 1 767 362 275 37 17 chrUextra 23880997 23881276 -5123380 - XDMR_DM Unknown Unknown -1 359 99 1 767 345 47 0 0 chrUextra 23881998 23882041 -5122615 + (GAGAA)n Simple_repeat Simple_repeat 3 45 0 1 767 2847 183 6 6 chrUextra 23882147 23882786 -5121870 + SAR_DM Satellite Satellite 247 885 -587 1 767 5536 0 0 2 chrUextra 23882891 23883535 -5121121 - LSU-rRNA_Dme rRNA rRNA -2658 1242 600 1 767 5554 5 0 0 chrUextra 23884382 23885029 -5119627 - R1_DM LINE R1 -2590 2766 2120 1 767 941 101 340 53 chrUextra 23885129 23885466 -5119190 + DNAREP1_DM LINE Penelope 94 594 0 1 767 5541 3 0 0 chrUextra 23885876 23886523 -5118133 - R1_DM LINE R1 -2267 3089 2443 1 767 2347 95 9 33 chrUextra 23886623 23887270 -5117386 + DMSAT6 Satellite Satellite 1 631 -56 1 767 365 0 22 0 chrUextra 23887370 23887415 -5117241 + (TTCTC)n Simple_repeat Simple_repeat 4 49 0 1 767 504 281 0 0 chrUextra 23888118 23888257 -5116399 - Gypsy3_I LTR Gypsy -4008 2169 2031 1 767 728 194 0 0 chrUextra 23888630 23888764 -5115892 - Gypsy3_I LTR Gypsy -4643 1534 1401 1 767 5187 11 0 1 chrUextra 23888864 23889511 -5115145 + DM176_I LTR Gypsy 887 1532 -4888 1 767 436 155 0 0 chrUextra 23890020 23890091 -5114565 - TAHRE LINE telomeric -2867 7596 7526 1 767 908 73 5 20 chrUextra 23890360 23891004 -5113652 - RSP Satellite Satellite -13 634 1 1 767 5456 12 1 0 chrUextra 23891105 23891752 -5112904 - DOC2_DM LINE Jockey -1911 2882 2235 1 767 446 125 0 0 chrUextra 23891852 23891932 -5112724 - SAR_DM Satellite Satellite -850 622 543 1 767 2264 169 25 15 chrUextra 23891943 23892472 -5112184 - SAR_DM Satellite Satellite -396 1076 543 1 767 5420 1 1 1 chrUextra 23892599 23893246 -5111410 + R1_DM LINE R1 722 1368 -3988 1 767 2318 103 23 25 chrUextra 23893346 23893993 -5110663 - DMSAT6 Satellite Satellite -81 646 1 1 767 34 24 0 0 chrUextra 23894367 23894408 -5110248 + AT_rich Low_complexity Low_complexity 1 41 0 1 767 261 0 0 0 chrUextra 23894840 23894869 -5109787 + (TTCTC)n Simple_repeat Simple_repeat 2 30 0 1 767 327 25 0 0 chrUextra 23894869 23894908 -5109748 + (TTGTG)n Simple_repeat Simple_repeat 3 42 0 1 767 1620 2 0 2 chrUextra 23894908 23895316 -5109340 + (GAGAA)n Simple_repeat Simple_repeat 1 406 0 1 767 2033 173 14 8 chrUextra 23895590 23896234 -5108422 - SAR_DM Satellite Satellite -620 647 1 1 767 5207 12 16 0 chrUextra 23896334 23896981 -5107675 - DMRT1B LINE R1 -3891 1292 636 1 767 777 56 0 0 chrUextra 23897081 23897189 -5107467 - ARS406_DM Unknown Unknown -173 180 73 1 767 2508 171 9 4 chrUextra 23897189 23897724 -5106932 + SAR_DM Satellite Satellite 354 891 -581 1 767 297 233 87 10 chrUextra 23898034 23898138 -5106518 + DNAREP1_DM LINE Penelope 67 178 -416 1 767 435 110 216 20 chrUextra 23898373 23898475 -5106181 + ROVER-LTR_DM LTR Gypsy 1 122 -245 1 767 493 0 0 0 chrUextra 23898575 23898631 -5106025 - NTS_DM Other Other -184 56 1 1 767 1861 0 17 13 chrUextra 23898631 23898870 -5105786 - NTS_DM Other Other 0 240 1 1 767 1813 13 17 13 chrUextra 23898870 23899109 -5105547 - NTS_DM Other Other 0 240 1 1 767 637 37 35 35 chrUextra 23899109 23899222 -5105434 - NTS_DM Other Other 0 240 128 1 767 5540 5 0 0 chrUextra 23899331 23899969 -5104687 - DOC2_DM LINE Jockey -545 4248 3611 1 767 2615 185 27 7 chrUextra 23900090 23900710 -5103946 + SAR_DM Satellite Satellite 326 958 -514 1 767 2831 175 9 8 chrUextra 23900819 23901463 -5103193 + SAR_DM Satellite Satellite 192 836 -636 1 767 1634 32 14 9 chrUextra 23901567 23901788 -5102868 - NTS_DM Other Other -18 222 1 1 767 1737 21 17 17 chrUextra 23901788 23902028 -5102628 - NTS_DM Other Other 0 240 1 1 767 1213 17 22 22 chrUextra 23902028 23902210 -5102446 - NTS_DM Other Other 0 240 59 1 767 51 31 0 0 chrUextra 23902310 23902375 -5102281 + AT_rich Low_complexity Low_complexity 1 65 0 1 767 22 35 0 0 chrUextra 23902551 23902580 -5102076 + AT_rich Low_complexity Low_complexity 1 29 0 1 767 224 185 31 0 chrUextra 23902807 23902872 -5101784 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 767 5693 1 0 0 chrUextra 23903057 23903704 -5100952 - Gypsy6_I LTR Gypsy -1261 5751 5105 1 767 5062 5 57 0 chrUextra 23903804 23904451 -5100205 + DM176_I LTR Gypsy 800 1483 -4937 1 767 3481 17 0 2 chrUextra 23904554 23904976 -5099680 + R1_DM LINE R1 1873 2293 -3063 1 767 1941 34 0 0 chrUextra 23904962 23905198 -5099458 + R1_DM LINE R1 3134 3369 -1987 1 767 5184 5 0 0 chrUextra 23905298 23905945 -5098711 + DM176_I LTR Gypsy 5476 6122 -298 1 767 4937 56 0 2 chrUextra 23906045 23906690 -5097966 - GTWIN_I LTR Gypsy -420 6001 5358 1 767 2110 124 10 49 chrUextra 23906986 23907439 -5097217 + Gypsy12_I LTR Gypsy 223 716 -4830 1 767 5384 19 0 0 chrUextra 23907539 23908186 -5096470 + R1_DM LINE R1 2018 2664 -2692 1 767 2713 178 42 9 chrUextra 23909033 23909680 -5094976 - SAR_DM Satellite Satellite -517 955 288 1 767 1076 143 36 36 chrUextra 23909785 23910003 -5094653 - HMSBEAGLE_I LTR Gypsy -580 5949 5732 1 767 2411 19 148 0 chrUextra 23910003 23910151 -5094505 - Stalker3_LTR LTR Gypsy 0 372 225 1 767 207 0 0 0 chrUextra 23910151 23910174 -5094482 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 1 767 2411 19 148 0 chrUextra 23910174 23910349 -5094307 - Stalker3_LTR LTR Gypsy -148 224 2 1 767 337 9 27 0 chrUextra 23910349 23910401 -5094255 - STALKER4_I LTR Gypsy 0 6530 6491 1 767 1776 0 0 0 chrUextra 23910527 23910728 -5093928 + LSU-rRNA_Dme rRNA rRNA 2454 2654 -1246 1 767 3822 5 0 0 chrUextra 23910727 23911174 -5093482 + R1_DM LINE R1 3231 3677 -1679 1 767 1113 6 36 18 chrUextra 23911274 23911440 -5093216 + NTS_DM Other Other 72 240 0 1 767 1279 12 0 18 chrUextra 23911440 23911605 -5093051 + NTS_DM Other Other 1 162 -78 1 767 488 119 36 0 chrUextra 23911715 23911799 -5092857 + NTS_DM Other Other 4 90 -150 1 767 5320 12 2 0 chrUextra 23912024 23912668 -5091988 - FW_DM LINE Jockey -1460 3232 2588 1 767 5378 1 0 5 chrUextra 23912768 23913415 -5091241 + FW_DM LINE Jockey 2613 3256 -1436 1 767 1189 24 6 41 chrUextra 23913518 23913689 -5090967 - NINJA_LTR LTR Pao -152 165 1 1 767 21 0 0 0 chrUextra 23913714 23913735 -5090921 + AT_rich Low_complexity Low_complexity 1 21 0 1 767 2857 156 17 17 chrUextra 23914273 23914906 -5089750 + SAR_DM Satellite Satellite 326 958 -514 1 767 2273 167 4 6 chrUextra 23915009 23915480 -5089176 + SAR_DM Satellite Satellite 434 903 -569 1 767 1065 76 0 0 chrUextra 23915487 23915645 -5089011 - ARS406_DM Unknown Unknown -195 158 1 1 767 362 209 0 19 chrUextra 23915549 23915656 -5089000 + SAR_DM Satellite Satellite 192 296 -1176 1 767 3068 5 0 69 chrUextra 23915756 23916175 -5088481 - LSU-rRNA_Dme rRNA rRNA -3510 390 1 1 767 21 95 0 0 chrUextra 23916187 23916250 -5088406 + AT_rich Low_complexity Low_complexity 1 63 0 1 767 356 208 65 9 chrUextra 23916908 23917015 -5087641 - Copia_I LTR Copia -80 4513 4401 1 767 29 28 0 0 chrUextra 23917060 23917096 -5087560 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 5355 0 25 1 chrUextra 23917250 23917897 -5086759 + ROO_I LTR Pao 5762 6423 -1833 1 767 4244 10 0 0 chrUextra 23917997 23918496 -5086160 - DMRT1B LINE R1 -2701 2482 1984 1 767 1355 6 0 0 chrUextra 23918484 23918644 -5086012 - DMRT1B LINE R1 -3927 1256 1097 1 767 21 36 0 0 chrUextra 23918744 23918772 -5085884 + AT_rich Low_complexity Low_complexity 1 28 0 1 767 909 50 0 0 chrUextra 23918793 23918914 -5085742 + LSU-rRNA_Dme rRNA rRNA 1 121 -3779 1 767 246 33 0 0 chrUextra 23918910 23918940 -5085716 - NTS_DM Other Other -209 31 2 1 767 424 306 61 14 chrUextra 23919096 23919391 -5085265 + G6_DM LINE Jockey 266 574 -1468 1 767 5312 14 6 5 chrUextra 23919494 23920138 -5084518 - MICROPIA_I LTR Gypsy -469 4007 3363 1 767 3742 2 0 0 chrUextra 23920270 23920698 -5083958 + ROO_LTR LTR Pao 1 428 0 1 767 22 0 0 0 chrUextra 23920710 23920732 -5083924 + AT_rich Low_complexity Low_complexity 1 22 0 1 767 21 71 0 0 chrUextra 23920773 23920815 -5083841 + AT_rich Low_complexity Low_complexity 1 42 0 1 767 3002 269 53 22 chrUextra 23921732 23923121 -5081535 - SAR_DM Satellite Satellite -864 1431 1 1 767 695 81 6 22 chrUextra 23923227 23923537 -5081119 + RSP Satellite Satellite 1 305 0 1 767 2564 28 0 24 chrUextra 23923541 23923873 -5080783 - G5_DM LINE Jockey 0 4856 4533 1 767 5607 1 0 0 chrUextra 23923973 23924620 -5080036 + ROO_I LTR Pao 5201 5847 -2409 1 767 348 89 0 32 chrUextra 23924720 23924774 -5079882 - DMTOM1_LTR LTR Gypsy -18 392 317 1 767 571 148 40 16 chrUextra 23924774 23924898 -5079758 - DMTOM1_LTR LTR Gypsy 0 410 284 1 767 254 190 17 0 chrUextra 23924915 23924973 -5079683 - DM176_LTR LTR Gypsy -141 366 308 1 767 248 133 22 0 chrUextra 23925092 23925137 -5079519 - DM176_LTR LTR Gypsy -238 269 224 1 767 801 111 0 0 chrUextra 23925241 23925367 -5079289 - DM176_I LTR Gypsy 0 6420 6295 1 767 5206 16 2 0 chrUextra 23925467 23926092 -5078564 - DMRT1B LINE R1 -1932 3251 2626 1 767 2726 180 6 19 chrUextra 23926215 23926861 -5077795 - SAR_DM Satellite Satellite -371 1101 464 1 767 3887 2 0 0 chrUextra 23926963 23927409 -5077247 + LSU-rRNA_Dme rRNA rRNA 2210 2655 -1245 1 767 1600 10 5 10 chrUextra 23927405 23927608 -5077048 + R1_DM LINE R1 3723 3924 -1432 1 767 1198 45 6 0 chrUextra 23928199 23928355 -5076301 + PROTOP DNA P 74 230 -4250 1 767 2737 179 25 8 chrUextra 23928455 23929101 -5075555 - SAR_DM Satellite Satellite -417 1055 399 1 767 5077 35 9 0 chrUextra 23929202 23929849 -5074807 - R1_DM LINE R1 -2297 3059 2407 1 767 1885 39 3 92 chrUextra 23930089 23930400 -5074256 - BATUMI_I LTR Pao -679 7284 7002 1 767 1577 5 0 15 chrUextra 23930400 23930596 -5074060 - BATUMI_I LTR Pao 0 7963 7771 1 767 729 0 0 0 chrUextra 23930696 23930777 -5073879 + (CAAGA)n Simple_repeat Simple_repeat 1 81 0 1 767 4674 2 8 74 chrUextra 23931443 23932090 -5072566 + LSU-rRNA_Dme rRNA rRNA 1235 1838 -2062 1 767 2482 174 43 19 chrUextra 23932192 23932812 -5071844 - SAR_DM Satellite Satellite -640 832 198 1 767 558 128 18 9 chrUextra 23932721 23932831 -5071825 + ARS406_DM Unknown Unknown 1 111 -242 1 767 2452 176 7 11 chrUextra 23932941 23933485 -5071171 - SAR_DM Satellite Satellite -435 1037 496 1 767 751 21 0 0 chrUextra 23933490 23933584 -5071072 + ARS406_DM Unknown Unknown 90 183 -170 1 767 2274 105 18 18 chrUextra 23933717 23934330 -5070326 - DMSAT6 Satellite Satellite 0 613 1 1 767 5266 3 3 3 chrUextra 23935178 23935825 -5068831 - MAX_I LTR Pao -6779 1135 489 1 767 58 0 0 0 chrUextra 23936020 23936078 -5068578 + AT_rich Low_complexity Low_complexity 1 58 0 1 767 370 185 23 105 chrUextra 23936109 23936242 -5068414 - DMTOM1_LTR LTR Gypsy -7 403 282 1 767 2073 28 0 4 chrUextra 23936262 23936517 -5068139 - PROTOP_A DNA P -851 254 1 1 767 398 37 0 0 chrUextra 23936672 23936726 -5067930 + ARS406_DM Unknown Unknown 105 158 -195 1 767 2626 174 7 11 chrUextra 23936733 23937307 -5067349 - SAR_DM Satellite Satellite -569 903 332 1 767 5307 17 0 5 chrUextra 23937420 23938066 -5066590 + QUASIMODO_I LTR Gypsy 107 749 -5311 1 767 5353 11 0 0 chrUextra 23938166 23938813 -5065843 - STALKER4_I LTR Gypsy -415 6115 5469 1 767 5356 9 0 1 chrUextra 23938913 23939560 -5065096 - DM176_I LTR Gypsy -1077 5343 4698 1 767 458 150 174 8 chrUextra 23939662 23939783 -5064873 + DM297_I LTR Gypsy 3073 3213 -2954 1 767 389 248 17 17 chrUextra 23939763 23939878 -5064778 + DM297_I LTR Gypsy 3380 3494 -2673 1 767 1256 250 33 12 chrUextra 23939878 23940299 -5064357 + TOM_I LTR Gypsy 4557 4986 -1126 1 767 1971 27 0 19 chrUextra 23940407 23940667 -5063989 - MAX_I LTR Pao -113 7801 7547 1 767 3300 37 0 2 chrUextra 23940643 23941054 -5063602 - MAX_I LTR Pao -1106 6808 6399 1 767 897 173 102 15 chrUextra 23941311 23941516 -5063140 + DMLTR5 LTR Gypsy 44 266 0 1 767 351 49 65 16 chrUextra 23941515 23941577 -5063079 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 767 244 128 0 21 chrUextra 23941599 23941647 -5063009 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 767 5428 6 1 1 chrUextra 23941901 23942548 -5062108 + R1_DM LINE R1 3619 4265 -1091 1 767 2867 158 25 14 chrUextra 23942648 23943295 -5061361 + SAR_DM Satellite Satellite 374 1027 -445 1 767 3827 99 17 31 chrUextra 23943395 23944031 -5060625 - TART LINE telomeric -3832 10645 10019 1 767 2374 98 13 19 chrUextra 23944169 23944787 -5059869 + DMSAT6 Satellite Satellite 1 613 0 1 767 4360 10 4 0 chrUextra 23944887 23945405 -5059251 + R1_DM LINE R1 4837 5356 0 1 767 644 74 11 0 chrUextra 23945438 23945533 -5059123 + R1_DM LINE R1 1 96 -5260 1 767 2684 0 0 73 chrUextra 23945633 23945991 -5058665 - LSU-rRNA_Dme rRNA rRNA -3568 332 1 1 767 21 95 0 0 chrUextra 23946003 23946066 -5058590 + AT_rich Low_complexity Low_complexity 1 63 0 1 767 5031 42 8 1 chrUextra 23946379 23947025 -5057631 + R1_DM LINE R1 889 1538 -3818 1 767 5280 20 1 1 chrUextra 23947125 23947771 -5056885 - R1_DM LINE R1 -1293 4063 3418 1 767 2973 160 13 9 chrUextra 23947871 23948503 -5056153 - SAR_DM Satellite Satellite -470 1002 369 1 767 5598 0 1 1 chrUextra 23948617 23949263 -5055393 - LSU-rRNA_Dme rRNA rRNA -828 3072 2427 1 767 3067 152 11 11 chrUextra 23949367 23950006 -5054650 + SAR_DM Satellite Satellite 399 1037 -435 1 767 5444 1 3 0 chrUextra 23950109 23950755 -5053901 + ROO_I LTR Pao 4794 5441 -2815 1 767 3958 45 8 17 chrUextra 23950857 23951501 -5053155 + Stalker2_I LTR Gypsy 6702 7224 -178 1 767 4535 53 0 34 chrUextra 23951602 23952247 -5052409 - R1_DM LINE R1 -4571 785 163 1 767 232 31 31 0 chrUextra 23952347 23952379 -5052277 - NTS_DM Other Other -207 33 1 1 767 1618 38 16 29 chrUextra 23952379 23952622 -5052034 - NTS_DM Other Other 0 240 1 1 767 1677 21 16 25 chrUextra 23952622 23952864 -5051792 - NTS_DM Other Other 0 240 1 1 767 777 24 31 31 chrUextra 23952864 23952993 -5051663 - NTS_DM Other Other 0 240 112 1 767 28 48 0 0 chrUextra 23953345 23953387 -5051269 + AT_rich Low_complexity Low_complexity 1 42 0 1 767 487 103 39 0 chrUextra 23953659 23953737 -5050919 - NTS_DM Other Other -150 90 10 1 767 2899 176 8 5 chrUextra 23953844 23954484 -5050172 + SAR_DM Satellite Satellite 230 871 -601 1 767 262 106 0 21 chrUextra 23954612 23954660 -5049996 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 767 4705 57 3 1 chrUextra 23956077 23956723 -5047933 + Stalker2_I LTR Gypsy 3559 4205 -3197 1 767 1453 42 18 27 chrUextra 23956823 23957045 -5047611 + NTS_DM Other Other 21 240 0 1 767 1668 34 17 21 chrUextra 23957045 23957286 -5047370 + NTS_DM Other Other 1 240 0 1 767 1268 55 0 11 chrUextra 23957286 23957469 -5047187 + NTS_DM Other Other 1 181 -59 1 767 2631 188 9 8 chrUextra 23957570 23958202 -5046454 - SAR_DM Satellite Satellite -645 827 195 1 767 565 142 0 0 chrUextra 23958109 23958215 -5046441 + ARS406_DM Unknown Unknown 1 106 -247 1 767 5508 3 0 0 chrUextra 23958323 23958961 -5045695 - R1_DM LINE R1 -344 5012 4375 1 767 5447 12 0 0 chrUextra 23959064 23959707 -5044949 - Gypsy4_I LTR Gypsy -4586 1702 1060 1 767 326 51 67 17 chrUextra 23959807 23959867 -5044789 + HMSBEAGLE_I LTR Gypsy 3 65 -6464 1 767 262 106 0 21 chrUextra 23959889 23959937 -5044719 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 767 226 0 0 0 chrUextra 23960553 23960579 -5044077 - NTS_DM Other Other -177 63 38 1 767 832 9 9 27 chrUextra 23960579 23960690 -5043966 - NTS_DM Other Other -107 133 25 1 767 21 57 0 0 chrUextra 23960716 23960751 -5043905 + AT_rich Low_complexity Low_complexity 1 35 0 1 767 1234 24 0 6 chrUextra 23960751 23960916 -5043740 - NTS_DM Other Other -39 201 38 1 767 833 28 0 27 chrUextra 23960916 23961028 -5043628 - NTS_DM Other Other -107 133 25 1 767 794 25 0 8 chrUextra 23961080 23961199 -5043457 - NTS_DM Other Other -39 201 84 1 767 5596 1 0 0 chrUextra 23961299 23961945 -5042711 - FW_DM LINE Jockey -2228 2464 1819 1 767 27 49 0 0 chrUextra 23962143 23962184 -5042472 + AT_rich Low_complexity Low_complexity 1 41 0 1 767 518 108 81 0 chrUextra 23962197 23962308 -5042348 - TART LINE telomeric -3988 10489 10370 1 767 974 208 115 57 chrUextra 23962308 23962691 -5041965 - HETA LINE telomeric -358 5723 5319 1 767 1901 9 0 0 chrUextra 23962791 23963016 -5041640 + R2_DM LINE R2 3381 3605 -2 1 767 3658 7 0 0 chrUextra 23963012 23963437 -5041219 + LSU-rRNA_Dme rRNA rRNA 2578 3002 -898 1 767 1334 177 12 11 chrUextra 23963537 23964183 -5040473 + SAR_DM Satellite Satellite 1 646 -645 1 767 5022 14 31 3 chrUextra 23964283 23964929 -5039727 + Invader2_I LTR Gypsy 148 811 -3781 1 767 402 272 73 51 chrUextra 23965029 23965343 -5039313 + QUASIMODO_I LTR Gypsy 1409 1729 -4331 1 767 5140 14 0 0 chrUextra 23965775 23966421 -5038235 + DM176_I LTR Gypsy 5372 6017 -403 1 767 1157 15 0 0 chrUextra 23966774 23966909 -5037747 + 5S_DM RNA RNA 1 135 0 1 767 2615 10 0 3 chrUextra 23968013 23968322 -5036334 + MICROPIA_I LTR Gypsy 328 635 -3841 1 767 2954 12 0 0 chrUextra 23968313 23968659 -5035997 + MICROPIA_I LTR Gypsy 744 1089 -3387 1 767 1281 250 67 11 chrUextra 23968944 23969405 -5035251 + Gypsy4_I LTR Gypsy 2007 2493 -3795 1 767 3318 22 0 0 chrUextra 23969505 23969906 -5034750 + DMCR1A LINE CR1 2442 2842 -1628 1 767 1980 44 0 4 chrUextra 23969900 23970151 -5034505 + DMCR1A LINE CR1 3484 3733 -737 1 767 5246 1 0 5 chrUextra 23970251 23970897 -5033759 + ROO_I LTR Pao 730 1372 -6884 1 767 1374 54 0 0 chrUextra 23971004 23971246 -5033410 + (TTCTC)n Simple_repeat Simple_repeat 1 242 0 1 767 22 56 0 0 chrUextra 23971831 23971867 -5032789 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 246 150 0 0 chrUextra 23971872 23971912 -5032744 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 246 150 0 0 chrUextra 23971964 23972004 -5032652 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 246 150 0 0 chrUextra 23972056 23972096 -5032560 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 255 125 0 0 chrUextra 23972139 23972179 -5032477 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 22 56 0 0 chrUextra 23972192 23972228 -5032428 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 455 17 0 49 chrUextra 23972254 23972315 -5032341 + NTS_DM Other Other 25 82 -158 1 767 587 0 14 0 chrUextra 23972315 23972389 -5032267 + Copia_LTR LTR Copia 1 75 -201 1 767 3023 3 0 0 chrUextra 23972489 23972834 -5031822 - LSU-rRNA_Dme rRNA rRNA -1768 2132 1788 1 767 2099 0 8 4 chrUextra 23972878 23973135 -5031521 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1531 1 767 5014 45 0 0 chrUextra 23973235 23973881 -5030775 + DMRT1B LINE R1 4224 4869 -314 1 767 1647 40 171 0 chrUextra 23974174 23974627 -5030029 - PROTOP_A DNA P 0 1105 576 1 767 2759 170 14 10 chrUextra 23974728 23975356 -5029300 - SAR_DM Satellite Satellite -516 956 326 1 767 1557 30 0 2 chrUextra 23975477 23976119 -5028537 + (ATAAG)n Simple_repeat Simple_repeat 1 640 0 1 767 1097 13 25 19 chrUextra 23976219 23976380 -5028276 + NTS_DM Other Other 79 240 0 1 767 1722 30 17 13 chrUextra 23976380 23976618 -5028038 + NTS_DM Other Other 1 239 -1 1 767 1494 60 17 25 chrUextra 23976619 23976860 -5027796 + NTS_DM Other Other 1 239 -1 1 767 324 0 0 0 chrUextra 23976965 23977001 -5027655 + (GAGAA)n Simple_repeat Simple_repeat 4 39 0 1 767 2476 191 10 8 chrUextra 23977711 23978324 -5026332 - SAR_DM Satellite Satellite -667 805 192 1 767 814 93 0 0 chrUextra 23978228 23978357 -5026299 + ARS406_DM Unknown Unknown 1 129 -224 1 767 4625 4 5 0 chrUextra 23978547 23979103 -5025553 - DOC LINE Jockey -6 4719 4161 1 767 2946 169 12 8 chrUextra 23979203 23979847 -5024809 + SAR_DM Satellite Satellite 255 901 -571 1 767 5540 0 1 5 chrUextra 23979949 23980595 -5024061 - SSU-rRNA_Dme rRNA rRNA -316 1679 1036 1 767 246 150 0 0 chrUextra 23980753 23980793 -5023863 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 246 150 0 0 chrUextra 23980845 23980885 -5023771 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 255 125 0 0 chrUextra 23980928 23980968 -5023688 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 22 56 0 0 chrUextra 23980981 23981017 -5023639 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 870 9 0 27 chrUextra 23981043 23981155 -5023501 + NTS_DM Other Other 25 133 -107 1 767 1222 18 0 12 chrUextra 23981155 23981321 -5023335 + NTS_DM Other Other 38 201 -39 1 767 4954 50 0 1 chrUextra 23981441 23982087 -5022569 + FW_DM LINE Jockey 121 765 -3927 1 767 1071 0 0 0 chrUextra 23982714 23982833 -5021823 + (TTGTG)n Simple_repeat Simple_repeat 3 121 0 1 767 5321 9 0 0 chrUextra 23982933 23983579 -5021077 + STALKER4_I LTR Gypsy 3010 3655 -2875 1 767 4603 93 0 0 chrUextra 23983680 23984325 -5020331 - Gypsy12_I LTR Gypsy -1558 3988 3344 1 767 5249 20 16 0 chrUextra 23984425 23985069 -5019587 + FW_DM LINE Jockey 395 1048 -3644 1 767 5407 12 0 0 chrUextra 23985171 23985817 -5018839 - ROO_I LTR Pao -1669 6587 5942 1 95 5531 0 1 5 chrUextra 23985917 23986563 -5018093 + SSU-rRNA_Dme rRNA rRNA 848 1491 -504 1 768 229 89 44 0 chrUextra 23986665 23986710 -5017946 - FB4_DM DNA Tc1 -146 3943 3897 1 768 620 93 41 0 chrUextra 23986703 23986800 -5017856 - Baggins1 LINE LOA -626 4827 4727 1 768 27 29 0 0 chrUextra 23987039 23987073 -5017583 + AT_rich Low_complexity Low_complexity 1 34 0 1 768 5513 1 0 1 chrUextra 23987409 23988055 -5016601 - R1_DM LINE R1 -1869 3487 2843 1 768 5547 0 0 0 chrUextra 23988155 23988801 -5015855 + ROO_I LTR Pao 6000 6645 -1611 1 768 2893 170 17 9 chrUextra 23988902 23989545 -5015111 + SAR_DM Satellite Satellite 400 1047 -425 1 768 5025 22 1 3 chrUextra 23989647 23990293 -5014363 - QUASIMODO_I LTR Gypsy -4700 1360 716 1 768 2716 57 55 0 chrUextra 23990393 23990776 -5013880 + PROTOP_A DNA P 702 1105 0 1 768 507 0 0 0 chrUextra 23991139 23991197 -5013459 - LSU-rRNA_Dme rRNA rRNA -2055 1845 1788 1 768 4438 6 6 7 chrUextra 23991241 23991785 -5012871 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1246 1 768 855 19 0 0 chrUextra 23991885 23991992 -5012664 + QUASIMODO_I LTR Gypsy 5954 6060 0 1 768 4595 4 0 0 chrUextra 23991992 23992531 -5012125 + QUASIMODO_LTR LTR Gypsy 1 539 -119 1 768 912 169 10 10 chrUextra 23992631 23992653 -5012003 + SAR_DM Satellite Satellite 434 634 -836 1 768 1192 84 0 0 chrUextra 23992653 23992832 -5011824 - ARS406_DM Unknown Unknown -164 189 11 1 768 1116 83 0 0 chrUextra 23992832 23993000 -5011656 - ARS406_DM Unknown Unknown -171 182 15 1 768 1635 130 29 0 chrUextra 23993000 23993276 -5011380 + MAX_LTR LTR Pao 1 284 -37 1 768 28 48 0 0 chrUextra 23993381 23993423 -5011233 + AT_rich Low_complexity Low_complexity 1 42 0 1 768 32 0 0 0 chrUextra 23993751 23993783 -5010873 + AT_rich Low_complexity Low_complexity 1 32 0 1 768 904 0 0 9 chrUextra 23993915 23994023 -5010633 + SSU-rRNA_Dme rRNA rRNA 1 107 -1888 1 768 937 18 0 0 chrUextra 23994123 23994235 -5010421 - SSU-rRNA_Dme rRNA rRNA -1883 112 1 1 768 32 0 0 0 chrUextra 23994367 23994399 -5010257 + AT_rich Low_complexity Low_complexity 1 32 0 1 768 28 48 0 0 chrUextra 23994727 23994769 -5009887 + AT_rich Low_complexity Low_complexity 1 42 0 1 768 5324 8 1 1 chrUextra 23994869 23995515 -5009141 + ROO_I LTR Pao 1569 2214 -6042 1 768 4382 44 1 3 chrUextra 23995615 23996261 -5008395 - R1_DM LINE R1 -3736 1620 932 1 768 2475 185 14 26 chrUextra 23996361 23997004 -5007652 + SAR_DM Satellite Satellite 485 1119 -353 1 768 438 52 0 0 chrUextra 23997567 23997625 -5007031 + DMCR1A LINE CR1 1082 1139 -3331 1 768 949 32 0 24 chrUextra 23997626 23997752 -5006904 + BATUMI_I LTR Pao 5666 5788 -2175 1 768 719 90 9 0 chrUextra 23997853 23997964 -5006692 - R1_DM LINE R1 -5222 134 23 1 768 3789 21 117 0 chrUextra 23997985 23998499 -5006157 - R1_DM LINE R1 0 5356 4783 1 768 1224 60 0 0 chrUextra 23998949 23999150 -5005506 + (TTCTC)n Simple_repeat Simple_repeat 1 201 0 1 768 5345 22 2 0 chrUextra 23999346 23999991 -5004665 - R1_DM LINE R1 -2787 2569 1924 1 768 4861 50 8 0 chrUextra 24000091 24000737 -5003919 + TAHRE LINE telomeric 5763 6413 -4050 1 768 2685 193 5 9 chrUextra 24000838 24001482 -5003174 + SAR_DM Satellite Satellite 212 852 -620 1 768 1790 274 14 14 chrUextra 24001587 24002228 -5002428 + ROVER-I_DM LTR Gypsy 2576 3216 -3368 1 768 2973 27 0 36 chrUextra 24002329 24002714 -5001942 + Baggins1 LINE LOA 5083 5453 0 1 768 1620 0 0 0 chrUextra 24003178 24003416 -5001240 + (TTCTC)n Simple_repeat Simple_repeat 1 238 0 1 768 2939 165 13 9 chrUextra 24003821 24004453 -5000203 - SAR_DM Satellite Satellite -470 1002 369 1 768 5656 0 0 1 chrUextra 24004567 24005213 -4999443 + SSU-rRNA_Dme rRNA rRNA 268 912 -1083 1 768 5112 39 1 1 chrUextra 24005313 24005959 -4998697 + R1_DM LINE R1 889 1534 -3822 1 768 5384 1 0 0 chrUextra 24006059 24006705 -4997951 - ROO_I LTR Pao -2949 5307 4662 1 768 1740 119 81 48 chrUextra 24006814 24007298 -4997358 + BATUMI_I LTR Pao 270 769 -7194 1 768 683 92 0 18 chrUextra 24007339 24007450 -4997206 + BATUMI_I LTR Pao 749 857 -7106 1 768 2316 112 18 8 chrUextra 24008336 24008943 -4995713 - DMSAT6 Satellite Satellite -2 613 1 1 768 983 68 34 0 chrUextra 24009088 24009235 -4995421 - QUASIMODO_I LTR Gypsy -885 5175 5024 1 768 1699 0 0 0 chrUextra 24009235 24009433 -4995223 - Copia2_LTR_DM LTR Copia 0 198 1 1 768 1670 37 8 39 chrUextra 24009433 24009689 -4994967 - Copia2_I LTR Copia 0 4162 3915 1 768 5528 3 0 0 chrUextra 24009789 24010435 -4994221 + R1_DM LINE R1 1584 2229 -3127 1 768 2108 30 0 8 chrUextra 24010535 24010800 -4993856 + QUASIMODO_LTR LTR Gypsy 396 658 0 1 768 2866 11 11 0 chrUextra 24011281 24011630 -4993026 + DM176_LTR LTR Gypsy 155 507 0 1 768 2487 20 0 0 chrUextra 24011630 24011927 -4992729 + DM176_I LTR Gypsy 1 297 -6123 1 768 5566 3 2 0 chrUextra 24012028 24012673 -4991983 - R1_DM LINE R1 -571 4785 4140 1 768 4576 39 85 9 chrUextra 24012773 24013419 -4991237 - R1_DM LINE R1 -4274 1082 388 1 768 5175 19 3 11 chrUextra 24013519 24014165 -4990491 + FW_DM LINE Jockey 3982 4622 -70 1 768 1494 22 0 0 chrUextra 24014270 24014448 -4990208 + (CTTAT)n Simple_repeat Simple_repeat 3 180 0 1 768 1029 137 0 3 chrUextra 24014473 24014834 -4989822 + (CTTAT)n Simple_repeat Simple_repeat 1 359 0 1 768 228 161 0 0 chrUextra 24014849 24014911 -4989745 + (CTTAT)n Simple_repeat Simple_repeat 1 62 0 1 768 3968 24 4 2 chrUextra 24015011 24015511 -4989145 + G_DM LINE Jockey 3846 4346 0 1 768 1011 8 0 16 chrUextra 24015529 24015657 -4988999 + G_DM LINE Jockey 1 126 -4220 1 768 2493 189 5 27 chrUextra 24015766 24016403 -4988253 + SAR_DM Satellite Satellite 496 1118 -354 1 768 2841 37 3 16 chrUextra 24016503 24016883 -4987773 + BATUMI_I LTR Pao 1700 2074 -5889 1 768 215 157 42 14 chrUextra 24016889 24016960 -4987696 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 768 90 10 0 0 chrUextra 24016960 24017057 -4987599 + AT_rich Low_complexity Low_complexity 1 97 0 1 768 638 33 43 22 chrUextra 24017057 24017149 -4987507 + BATUMI_I LTR Pao 7050 7143 -820 1 768 1098 36 0 0 chrUextra 24017249 24017386 -4987270 - FW_DM LINE Jockey -4555 137 1 1 768 3999 32 2 2 chrUextra 24017394 24017895 -4986761 + R1_DM LINE R1 1377 1877 -3479 1 768 2815 181 9 8 chrUextra 24017995 24018641 -4986015 + SAR_DM Satellite Satellite 287 933 -539 1 768 5628 0 0 1 chrUextra 24018741 24019387 -4985269 + SSU-rRNA_Dme rRNA rRNA 428 1072 -923 1 768 5217 22 0 1 chrUextra 24019487 24020133 -4984523 - STALKER4_I LTR Gypsy -4016 2514 1870 1 768 828 185 59 14 chrUextra 24020235 24020454 -4984202 - SAR_DM Satellite Satellite -708 764 536 1 768 240 23 67 22 chrUextra 24020457 24020502 -4984154 + (TTTAA)n Simple_repeat Simple_repeat 3 49 0 1 768 1602 177 32 11 chrUextra 24020502 24020879 -4983777 - SAR_DM Satellite Satellite -430 1042 658 1 768 5423 5 1 0 chrUextra 24020979 24021625 -4983031 + Gypsy4_I LTR Gypsy 5030 5676 -612 1 768 2000 46 4 8 chrUextra 24021725 24021990 -4982666 - Baggins1 LINE LOA -300 5153 4890 1 768 523 35 81 0 chrUextra 24022284 24022371 -4982285 - Jockey2 LINE Jockey 0 3428 3335 1 768 246 150 0 0 chrUextra 24022483 24022523 -4982133 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 22 56 0 0 chrUextra 24022621 24022657 -4981999 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 3410 0 0 0 chrUextra 24022729 24023117 -4981539 - LSU-rRNA_Dme rRNA rRNA 0 3900 3513 1 768 2776 173 12 9 chrUextra 24023219 24023862 -4980794 - SAR_DM Satellite Satellite -641 831 187 1 768 21 0 0 0 chrUextra 24024153 24024174 -4980482 + AT_rich Low_complexity Low_complexity 1 21 0 1 768 4283 41 15 0 chrUextra 24024709 24025298 -4979358 + IDEFIX_I LTR Gypsy 3685 4282 -1346 1 768 473 60 0 0 chrUextra 24025288 24025355 -4979301 + IDEFIX_I LTR Gypsy 4509 4575 -1053 1 768 726 46 0 115 chrUextra 24025486 24025608 -4979048 - Baggins1 LINE LOA 0 5453 5346 1 768 27 29 0 0 chrUextra 24025931 24025965 -4978691 + AT_rich Low_complexity Low_complexity 1 34 0 1 768 4073 6 10 0 chrUextra 24026201 24026680 -4977976 - DMRT1B LINE R1 -1164 4019 3536 1 768 1503 0 0 0 chrUextra 24026680 24026847 -4977809 + (CACAA)n Simple_repeat Simple_repeat 1 167 0 1 768 2838 181 9 8 chrUextra 24026949 24027590 -4977066 + SAR_DM Satellite Satellite 212 853 -619 1 768 4634 0 0 45 chrUextra 24027745 24028339 -4976317 + LSU-rRNA_Dme rRNA rRNA 1 567 -3333 1 768 2288 118 12 11 chrUextra 24028439 24029085 -4975571 - DMSAT6 Satellite Satellite -34 646 1 1 768 5636 0 3 0 chrUextra 24029186 24029831 -4974825 + LSU-rRNA_Dme rRNA rRNA 2968 3614 -286 1 768 255 125 0 0 chrUextra 24029943 24029983 -4974673 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 246 150 0 0 chrUextra 24030026 24030066 -4974590 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 246 150 0 0 chrUextra 24030211 24030251 -4974405 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 22 56 0 0 chrUextra 24030256 24030292 -4974364 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 1868 0 0 0 chrUextra 24030364 24030577 -4974079 - LSU-rRNA_Dme rRNA rRNA 0 3900 3688 1 768 2232 93 11 41 chrUextra 24030677 24031321 -4973335 + DMSAT6 Satellite Satellite 1 624 -235 1 768 2696 189 10 14 chrUextra 24031422 24032066 -4972590 - SAR_DM Satellite Satellite -1091 641 1 1 768 4503 4 0 0 chrUextra 24032167 24032697 -4971959 - DOC LINE Jockey -2690 2035 1506 1 768 737 28 9 45 chrUextra 24032695 24032807 -4971849 - Gypsy12_LTR LTR Gypsy -1226 1110 1003 1 768 2641 153 25 11 chrUextra 24032914 24033554 -4971102 - SAR_DM Satellite Satellite -208 1264 373 1 768 5404 0 2 2 chrUextra 24033657 24034302 -4970354 + DM412 LTR Gypsy 776 1420 -5477 1 768 21 0 0 0 chrUextra 24034425 24034446 -4970210 + AT_rich Low_complexity Low_complexity 1 21 0 1 768 2741 178 12 9 chrUextra 24035150 24035790 -4968866 - SAR_DM Satellite Satellite -549 923 282 1 768 3996 55 21 3 chrUextra 24035892 24036459 -4968197 + DM297_I LTR Gypsy 3775 4351 -1816 1 768 579 14 0 14 chrUextra 24036463 24036537 -4968119 + MDG1_I LTR Gypsy 5401 5473 -1123 1 768 2069 4 0 0 chrUextra 24036637 24036880 -4967776 - FW_DM LINE Jockey -3075 1617 1375 1 768 3439 5 0 0 chrUextra 24036879 24037282 -4967374 + DOC LINE Jockey 2790 3192 -1533 1 768 2827 182 6 8 chrUextra 24037386 24038024 -4966632 - SAR_DM Satellite Satellite -644 828 192 1 768 2417 186 16 21 chrUextra 24038127 24038772 -4965884 + SAR_DM Satellite Satellite 1 641 -396 1 768 601 333 8 7 chrUextra 24039107 24039446 -4965210 + GTWIN_I LTR Gypsy 3132 3539 -2882 1 768 1861 0 17 13 chrUextra 24039634 24039873 -4964783 + NTS_DM Other Other 1 240 0 1 768 1861 0 17 13 chrUextra 24039873 24040112 -4964544 + NTS_DM Other Other 1 240 0 1 768 1211 7 0 7 chrUextra 24040112 24040262 -4964394 + NTS_DM Other Other 1 149 -91 1 768 1436 77 0 0 chrUextra 24041114 24041310 -4963346 + Gypsy12_I LTR Gypsy 5351 5546 0 1 768 1639 195 52 28 chrUextra 24041310 24041737 -4962919 + Gypsy12_LTR LTR Gypsy 1 437 -1899 1 768 2640 119 29 21 chrUextra 24041962 24042497 -4962159 - Gypsy12A_LTR LTR Gypsy 0 2336 1804 1 768 255 287 58 84 chrUextra 24042653 24042843 -4961813 + Invader1_LTR LTR Gypsy 184 368 -55 1 768 2964 174 8 3 chrUextra 24043343 24043983 -4960673 + SAR_DM Satellite Satellite 237 879 -593 1 768 2523 178 64 9 chrUextra 24044087 24044732 -4959924 - SAR_DM Satellite Satellite -569 903 224 1 768 2749 176 9 9 chrUextra 24044832 24045464 -4959192 + SAR_DM Satellite Satellite 445 1076 -396 1 768 2695 89 0 0 chrUextra 24045578 24045995 -4958661 + S_DM DNA Tc1 1320 1736 0 1 768 2858 176 17 6 chrUextra 24046322 24046967 -4957689 - SAR_DM Satellite Satellite -399 1073 422 1 768 5215 23 2 0 chrUextra 24047068 24047712 -4956944 + DMCR1A LINE CR1 3701 4345 -125 1 768 22 56 0 0 chrUextra 24048039 24048075 -4956581 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 875 19 0 0 chrUextra 24048351 24048457 -4956199 + LSU-rRNA_Dme rRNA rRNA 1 106 -3794 1 768 5346 6 2 0 chrUextra 24048561 24049202 -4955454 - ROO_I LTR Pao -4477 3779 3138 1 768 334 88 18 0 chrUextra 24049302 24049359 -4955297 - ARS406_DM Unknown Unknown -295 58 1 1 768 2831 176 5 11 chrUextra 24049319 24049947 -4954709 + SAR_DM Satellite Satellite 246 869 -603 1 768 2892 176 8 9 chrUextra 24050794 24051436 -4953220 + SAR_DM Satellite Satellite 293 933 -539 1 768 2612 10 0 0 chrUextra 24052282 24052586 -4952070 + Gypsy4_I LTR Gypsy 5985 6288 0 1 768 2197 18 10 44 chrUextra 24052586 24052883 -4951773 + Gypsy4_LTR LTR Gypsy 1 287 0 1 768 248 159 0 0 chrUextra 24052883 24052927 -4951729 - DNAREP1_DM LINE Penelope -106 488 445 1 768 3849 39 6 10 chrUextra 24053030 24053672 -4950984 - PROTOP_B DNA P -388 765 63 1 768 5539 6 0 0 chrUextra 24053772 24054417 -4950239 + DMRT1B LINE R1 36 680 -4503 1 768 5567 5 0 0 chrUextra 24054517 24055162 -4949494 + R1_DM LINE R1 4323 4967 -389 1 768 724 0 0 0 chrUextra 24055401 24055485 -4949171 + DM1731_LTR LTR Copia 1 84 -252 1 768 3618 0 2 0 chrUextra 24055488 24055907 -4948749 + DM1731_I LTR Copia 1 420 -3556 1 768 5363 14 0 0 chrUextra 24056007 24056652 -4948004 + G2_DM LINE Jockey 2106 2750 -352 1 768 4616 32 2 40 chrUextra 24056752 24057397 -4947259 + DOC2_DM LINE Jockey 631 1250 -3543 1 768 2211 186 14 6 chrUextra 24057497 24058142 -4946514 + SAR_DM Satellite Satellite 1 649 -677 1 768 2639 167 11 5 chrUextra 24058243 24058878 -4945778 - SAR_DM Satellite Satellite -645 638 1 1 768 724 34 0 0 chrUextra 24058987 24059075 -4945581 - LSU-rRNA_Dme rRNA rRNA -1173 2727 2640 1 768 4723 16 0 0 chrUextra 24059073 24059632 -4945024 - R1_DM LINE R1 0 5356 4798 1 768 5534 3 0 0 chrUextra 24059732 24060377 -4944279 - G2_DM LINE Jockey -1936 1166 522 1 768 2658 184 6 10 chrUextra 24060494 24061121 -4943535 - SAR_DM Satellite Satellite -396 1076 452 1 768 362 157 0 0 chrUextra 24061222 24061292 -4943364 - ARS406_DM Unknown Unknown -283 70 1 1 768 2802 186 6 5 chrUextra 24061230 24061867 -4942789 + SAR_DM Satellite Satellite 224 861 -611 1 768 4419 0 4 4 chrUextra 24061967 24062487 -4942169 + SSU-rRNA_Dme rRNA rRNA 1129 1648 -347 1 768 252 0 0 0 chrUextra 24062495 24062524 -4942132 + SSU-rRNA_Dme rRNA rRNA 1967 1995 0 1 768 5567 0 2 2 chrUextra 24062712 24063353 -4941303 - SSU-rRNA_Dme rRNA rRNA -52 1943 1303 1 768 5447 2 2 3 chrUextra 24063457 24064102 -4940554 + R1_DM LINE R1 3239 3882 -1474 1 768 26 30 0 0 chrUextra 24064206 24064239 -4940417 + AT_rich Low_complexity Low_complexity 1 33 0 1 768 23 68 0 0 chrUextra 24064279 24064323 -4940333 + AT_rich Low_complexity Low_complexity 1 44 0 1 768 21 89 0 0 chrUextra 24064361 24064417 -4940239 + AT_rich Low_complexity Low_complexity 1 56 0 1 768 1158 122 0 0 chrUextra 24064949 24065275 -4939381 + (TA)n Simple_repeat Simple_repeat 1 326 0 1 768 856 157 35 105 chrUextra 24065363 24065591 -4939065 + DMLTR5 LTR Gypsy 40 251 -15 1 768 463 15 14 57 chrUextra 24065692 24065762 -4938894 - NTS_DM Other Other -149 91 25 1 768 21 57 0 0 chrUextra 24065788 24065823 -4938833 + AT_rich Low_complexity Low_complexity 1 35 0 1 768 1252 18 0 6 chrUextra 24065823 24065988 -4938668 - NTS_DM Other Other -39 201 38 1 768 870 9 0 27 chrUextra 24065988 24066100 -4938556 - NTS_DM Other Other -107 133 25 1 768 1252 18 0 6 chrUextra 24066152 24066317 -4938339 - NTS_DM Other Other -39 201 38 1 768 3055 147 5 9 chrUextra 24066438 24066996 -4937660 + TAHRE LINE telomeric 9897 10452 -11 1 768 770 0 0 0 chrUextra 24066993 24067082 -4937574 + TAHRE LINE telomeric 3938 4026 -6437 1 768 2794 164 34 12 chrUextra 24067182 24067825 -4936831 - SAR_DM Satellite Satellite -470 1002 346 1 768 2403 91 12 37 chrUextra 24067928 24068572 -4936084 - DMSAT6 Satellite Satellite -13 627 1 1 768 453 0 0 0 chrUextra 24068672 24068724 -4935932 + LSU-rRNA_Dme rRNA rRNA 2530 2581 -1319 1 768 5131 3 0 2 chrUextra 24068725 24069317 -4935339 + R2_DM LINE R2 28 618 -2989 1 768 1474 21 0 10 chrUextra 24069417 24069611 -4935045 - NTS_DM Other Other -48 192 1 1 768 1756 17 17 17 chrUextra 24069611 24069851 -4934805 - NTS_DM Other Other 0 240 1 1 768 1438 15 20 20 chrUextra 24069851 24070054 -4934602 - NTS_DM Other Other 0 240 38 1 768 2317 0 4 0 chrUextra 24070162 24070428 -4934228 + SSU-rRNA_Dme rRNA rRNA 1729 1995 0 1 768 21 89 0 0 chrUextra 24070447 24070503 -4934153 + AT_rich Low_complexity Low_complexity 1 56 0 1 768 973 32 25 25 chrUextra 24070907 24071066 -4933590 + NTS_DM Other Other 82 240 0 1 768 1734 21 17 17 chrUextra 24071066 24071306 -4933350 + NTS_DM Other Other 1 240 0 1 768 1712 25 17 17 chrUextra 24071306 24071546 -4933110 + NTS_DM Other Other 1 240 0 1 768 5450 2 3 5 chrUextra 24071652 24072297 -4932359 + LSU-rRNA_Dme rRNA rRNA 758 1401 -2499 1 768 2740 148 79 38 chrUextra 24072397 24073028 -4931628 + TART LINE telomeric 9695 10351 -4126 1 768 2807 186 3 8 chrUextra 24073148 24073787 -4930869 - SAR_DM Satellite Satellite -425 1047 412 1 768 5063 33 28 0 chrUextra 24073887 24074532 -4930124 + R1_DM LINE R1 3052 3714 -1642 1 768 5559 5 0 0 chrUextra 24074632 24075277 -4929379 - IDEFIX_I LTR Gypsy -3423 2205 1561 1 768 5147 12 47 0 chrUextra 24075377 24076022 -4928634 - R1_DM LINE R1 -4386 970 296 1 768 2087 157 12 45 chrUextra 24076123 24076684 -4927972 - HETA LINE telomeric -5500 581 39 1 768 319 214 0 18 chrUextra 24076653 24076767 -4927889 - HETA LINE telomeric -5725 356 245 1 768 5353 17 0 0 chrUextra 24076873 24077512 -4927144 - R1_DM LINE R1 -760 4596 3958 1 768 872 46 0 0 chrUextra 24078357 24078466 -4926190 - R1_DM LINE R1 -861 4495 4387 1 768 4341 39 0 0 chrUextra 24078463 24079002 -4925654 - R1_DM LINE R1 -2010 3346 2808 1 768 1429 59 0 0 chrUextra 24079561 24079747 -4924909 + PROTOP DNA P 74 259 -4221 1 768 4645 11 62 0 chrUextra 24079847 24080492 -4924164 + SSU-rRNA_Dme rRNA rRNA 430 1114 -881 1 768 2985 164 20 6 chrUextra 24080592 24081237 -4923419 - SAR_DM Satellite Satellite -443 1029 376 1 768 771 0 0 11 chrUextra 24081337 24081429 -4923227 - R1_DM LINE R1 -464 4892 4802 1 768 549 0 0 0 chrUextra 24081441 24081504 -4923152 - R1_DM LINE R1 0 5356 5294 1 768 4182 2 0 0 chrUextra 24081502 24081982 -4922674 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2177 1 768 4711 39 23 2 chrUextra 24082086 24082727 -4921929 - R1_DM LINE R1 -4105 1251 597 1 768 2665 168 9 10 chrUextra 24082827 24083405 -4921251 + SAR_DM Satellite Satellite 418 994 -478 1 768 515 43 0 0 chrUextra 24083403 24083472 -4921184 - ARS406_DM Unknown Unknown -171 182 114 1 768 2798 180 9 9 chrUextra 24083572 24084217 -4920439 - SAR_DM Satellite Satellite -399 1073 429 1 768 5572 2 0 0 chrUextra 24084317 24084962 -4919694 - FW_DM LINE Jockey -245 4447 3803 1 768 736 31 0 0 chrUextra 24085062 24085158 -4919498 - IDEFIX_LTR LTR Gypsy -498 96 1 1 768 551 2 125 9 chrUextra 24085158 24085698 -4918958 + (TA)n Simple_repeat Simple_repeat 1 602 0 1 768 5296 12 8 0 chrUextra 24086552 24087197 -4917459 + R1_DM LINE R1 257 906 -4450 1 768 2303 107 17 12 chrUextra 24087297 24087940 -4916716 - DMSAT6 Satellite Satellite -28 645 1 1 768 5202 30 2 0 chrUextra 24088045 24088687 -4915969 + R1_DM LINE R1 2392 3034 -2322 1 768 5044 9 73 0 chrUextra 24088787 24089432 -4915224 - STALKER4_I LTR Gypsy -2716 3814 3123 1 768 4933 23 11 6 chrUextra 24089532 24090176 -4914480 - PROTOP_A DNA P -308 797 151 1 768 1104 8 0 0 chrUextra 24090280 24090405 -4914251 + (CAAGA)n Simple_repeat Simple_repeat 4 128 0 1 768 2370 94 30 33 chrUextra 24091025 24091667 -4912989 - DMSAT6 Satellite Satellite -165 640 1 1 768 2613 176 40 14 chrUextra 24091767 24092412 -4912244 - SAR_DM Satellite Satellite -469 1003 342 1 768 204 40 0 0 chrUextra 24092792 24092817 -4911839 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 768 1118 36 0 0 chrUextra 24093017 24093157 -4911499 + PROTOP_B DNA P 74 213 -940 1 768 5207 30 5 0 chrUextra 24093257 24093902 -4910754 - R1_DM LINE R1 -2328 3028 2381 1 768 4409 51 64 3 chrUextra 24094002 24094646 -4910010 - MDG1_I LTR Gypsy -4779 1817 1135 1 768 2019 176 9 9 chrUextra 24094750 24095391 -4909265 - SAR_DM Satellite Satellite -706 641 1 1 768 488 119 36 0 chrUextra 24095641 24095725 -4908931 + NTS_DM Other Other 4 90 -150 1 768 28 48 0 0 chrUextra 24095998 24096040 -4908616 + AT_rich Low_complexity Low_complexity 1 42 0 1 768 2694 171 17 17 chrUextra 24096242 24096880 -4907776 + SAR_DM Satellite Satellite 321 958 -514 1 768 2773 245 47 21 chrUextra 24096982 24098371 -4906285 - SAR_DM Satellite Satellite -620 1425 1 1 768 2946 172 8 8 chrUextra 24099217 24099860 -4904796 - SAR_DM Satellite Satellite -484 988 346 1 768 318 26 0 0 chrUextra 24099962 24100001 -4904655 + (TTCTC)n Simple_repeat Simple_repeat 4 42 0 1 768 4449 2 6 7 chrUextra 24100707 24101247 -4903409 + LSU-rRNA_Dme rRNA rRNA 1250 1788 -2112 1 768 531 0 0 0 chrUextra 24101291 24101352 -4903304 + LSU-rRNA_Dme rRNA rRNA 1788 1848 -2052 1 768 1620 37 0 0 chrUextra 24101452 24101778 -4902878 + (GAGAA)n Simple_repeat Simple_repeat 1 326 0 1 768 1423 212 99 113 chrUextra 24102225 24102842 -4901814 + Gypsy3_I LTR Gypsy 75 682 -5495 1 768 669 179 7 14 chrUextra 24103002 24103144 -4901512 - HETRP_DM Satellite Satellite -203 1669 1529 1 768 477 217 8 16 chrUextra 24103277 24103399 -4901257 - HETRP_DM Satellite Satellite -203 1669 1549 1 768 192 40 0 0 chrUextra 24103399 24103424 -4901232 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 768 2646 172 33 23 chrUextra 24103687 24104330 -4900326 - SAR_DM Satellite Satellite -629 843 195 1 768 2477 68 9 38 chrUextra 24104432 24105077 -4899579 + DMSAT6 Satellite Satellite 1 626 -64 1 768 5180 26 8 0 chrUextra 24105177 24105822 -4898834 + MAX_I LTR Pao 1572 2221 -5693 1 768 25 0 0 0 chrUextra 24105924 24105949 -4898707 + AT_rich Low_complexity Low_complexity 1 25 0 1 768 32 0 0 0 chrUextra 24106277 24106309 -4898347 + AT_rich Low_complexity Low_complexity 1 32 0 1 768 1064 0 0 8 chrUextra 24106441 24106567 -4898089 + SSU-rRNA_Dme rRNA rRNA 1 125 -1870 1 768 1003 21 0 7 chrUextra 24106669 24106812 -4897844 + NTS_DM Other Other 60 201 -39 1 768 870 9 0 27 chrUextra 24106864 24106976 -4897680 + NTS_DM Other Other 25 133 -107 1 768 1252 18 0 6 chrUextra 24106976 24107141 -4897515 + NTS_DM Other Other 38 201 -39 1 768 848 18 0 27 chrUextra 24107193 24107305 -4897351 + NTS_DM Other Other 25 133 -107 1 768 2795 159 40 16 chrUextra 24107412 24108057 -4896599 - SAR_DM Satellite Satellite -439 1033 373 1 768 5546 2 0 2 chrUextra 24108157 24108802 -4895854 + DOC LINE Jockey 1914 2557 -2168 1 768 255 125 0 0 chrUextra 24108988 24109028 -4895628 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 768 22 56 0 0 chrUextra 24109041 24109077 -4895579 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 870 9 0 27 chrUextra 24109103 24109215 -4895441 + NTS_DM Other Other 25 133 -107 1 768 1252 18 0 6 chrUextra 24109215 24109380 -4895276 + NTS_DM Other Other 38 201 -39 1 768 848 18 0 27 chrUextra 24109432 24109544 -4895112 + NTS_DM Other Other 25 133 -107 1 768 5347 0 2 0 chrUextra 24109647 24110292 -4894364 - TABOR_I LTR Gypsy -4778 1558 913 1 768 5590 0 0 0 chrUextra 24110392 24111037 -4893619 - ROO_I LTR Pao -6457 1799 1155 1 768 4432 27 93 6 chrUextra 24111137 24111782 -4892874 - PROTOP DNA P -3621 859 159 1 768 241 125 0 0 chrUextra 24111913 24111953 -4892703 - HETRP_DM Satellite Satellite -315 1557 1518 1 768 373 194 87 10 chrUextra 24112087 24112191 -4892465 + DNAREP1_DM LINE Penelope 67 178 -416 1 768 446 101 218 20 chrUextra 24112426 24112527 -4892129 + ROVER-LTR_DM LTR Gypsy 1 121 -246 1 768 4508 71 3 14 chrUextra 24112627 24113269 -4891387 - R1_DM LINE R1 -4676 680 46 1 768 420 37 0 0 chrUextra 24113374 24113428 -4891228 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 1 768 1554 26 0 3 chrUextra 24113439 24114012 -4890644 + (TCTA)n Simple_repeat Simple_repeat 1 570 0 1 768 4228 112 2 6 chrUextra 24114117 24114762 -4889894 + Gypsy12_I LTR Gypsy 2248 2889 -2657 1 768 2395 81 16 59 chrUextra 24114862 24115507 -4889149 + DMSAT6 Satellite Satellite 1 617 -25 1 768 763 20 0 29 chrUextra 24115607 24115709 -4888947 - NTS_DM Other Other -117 123 25 1 768 1654 5 0 0 chrUextra 24115761 24115962 -4888694 - NTS_DM Other Other -39 201 1 1 768 1805 4 17 17 chrUextra 24115962 24116202 -4888454 - NTS_DM Other Other 0 240 1 1 768 247 21 80 60 chrUextra 24116202 24116252 -4888404 - NTS_DM Other Other 0 240 190 1 768 586 293 28 23 chrUextra 24116354 24116707 -4887949 + XDMR Unknown Unknown 1 355 -6 1 768 566 301 41 43 chrUextra 24116707 24116931 -4887725 - SAR_DM Satellite Satellite -758 575 1 1 768 787 102 0 0 chrUextra 24117097 24117225 -4887431 - ARS406_DM Unknown Unknown -225 128 1 1 11 2589 188 7 8 chrUextra 24117129 24117742 -4886914 + SAR_DM Satellite Satellite 192 803 -669 1 769 5150 30 0 3 chrUextra 24117842 24118485 -4886171 + R1_DM LINE R1 2545 3185 -2171 1 769 4268 53 2 57 chrUextra 24118587 24119232 -4885424 + BATUMI_I LTR Pao 2304 2912 -5051 1 769 1371 39 0 0 chrUextra 24119337 24119515 -4885141 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 769 1350 80 0 0 chrUextra 24119526 24119971 -4884685 + (CATCT)n Simple_repeat Simple_repeat 1 445 0 1 769 815 33 0 8 chrUextra 24120077 24120199 -4884457 + NTS_DM Other Other 81 201 -39 1 769 870 9 0 27 chrUextra 24120251 24120363 -4884293 + NTS_DM Other Other 25 133 -107 1 769 1252 18 0 6 chrUextra 24120363 24120528 -4884128 + NTS_DM Other Other 38 201 -39 1 769 21 57 0 0 chrUextra 24120528 24120563 -4884093 + AT_rich Low_complexity Low_complexity 1 35 0 1 769 832 9 9 27 chrUextra 24120589 24120700 -4883956 + NTS_DM Other Other 25 133 -107 1 769 689 298 50 46 chrUextra 24120837 24121152 -4883504 + Gypsy_DS LTR Gypsy 2372 3096 -4426 1 769 1353 52 24 0 chrUextra 24121152 24121365 -4883291 + TLD2 Unknown Unknown 1 218 0 1 769 689 298 50 46 chrUextra 24121365 24121467 -4883189 + Gypsy_DS LTR Gypsy 3097 3335 -4187 1 769 5284 14 40 0 chrUextra 24121567 24122211 -4882445 - R1_DM LINE R1 -2945 2411 1742 1 769 1637 5 5 0 chrUextra 24122311 24122507 -4882149 - DM1731_I LTR Copia -3779 197 1 1 769 2715 33 0 0 chrUextra 24122507 24122843 -4881813 - DM1731_LTR LTR Copia 0 336 1 1 769 677 97 9 0 chrUextra 24122843 24122955 -4881701 + ARS406_DM Unknown Unknown 13 125 -228 1 769 2734 162 52 11 chrUextra 24123058 24123699 -4880957 - SAR_DM Satellite Satellite -425 1047 381 1 769 26 93 0 0 chrUextra 24123983 24124058 -4880598 + AT_rich Low_complexity Low_complexity 1 75 0 1 769 32 0 0 0 chrUextra 24124152 24124184 -4880472 + AT_rich Low_complexity Low_complexity 1 32 0 1 769 1083 16 0 0 chrUextra 24124316 24124443 -4880213 + SSU-rRNA_Dme rRNA rRNA 1 127 -1868 1 769 1850 4 17 13 chrUextra 24124567 24124806 -4879850 + NTS_DM Other Other 1 240 0 1 769 1861 0 17 13 chrUextra 24124806 24125045 -4879611 + NTS_DM Other Other 1 240 0 1 769 1176 0 7 0 chrUextra 24125045 24125187 -4879469 + NTS_DM Other Other 1 143 -97 1 769 5205 14 6 0 chrUextra 24125287 24125930 -4878726 + ROO_I LTR Pao 3315 3961 -4295 1 769 1176 0 0 0 chrUextra 24126043 24126178 -4878478 + 5S_DM RNA RNA 1 135 0 1 769 1176 0 0 0 chrUextra 24126405 24126540 -4878116 + 5S_DM RNA RNA 1 135 0 1 769 2134 8 0 0 chrUextra 24126775 24127022 -4877634 + Invader1_LTR LTR Gypsy 177 423 0 1 769 3193 33 0 0 chrUextra 24127022 24127419 -4877237 + PROTOP_A DNA P 700 1096 -9 1 769 5126 31 12 0 chrUextra 24127519 24128163 -4876493 + R1_DM LINE R1 2504 3155 -2201 1 769 5443 12 0 0 chrUextra 24128263 24128907 -4875749 - DMRT1B LINE R1 -2923 2260 1617 1 769 5600 2 0 2 chrUextra 24129007 24129651 -4875005 + LSU-rRNA_Dme rRNA rRNA 2571 3213 -687 1 769 1915 264 0 0 chrUextra 24129751 24130282 -4874374 - G6_DM LINE Jockey -783 1259 729 1 769 5614 0 0 2 chrUextra 24130495 24131139 -4873517 + LSU-rRNA_Dme rRNA rRNA 2715 3357 -543 1 769 2629 180 12 24 chrUextra 24131244 24131882 -4872774 - SAR_DM Satellite Satellite -361 1111 481 1 769 21 95 0 0 chrUextra 24131985 24132048 -4872608 + AT_rich Low_complexity Low_complexity 1 63 0 1 769 34 24 0 0 chrUextra 24132261 24132302 -4872354 + AT_rich Low_complexity Low_complexity 1 41 0 1 769 5493 5 2 0 chrUextra 24132727 24133371 -4871285 - Invader1_I LTR Gypsy -71 3115 2471 1 769 5268 26 3 0 chrUextra 24133473 24134115 -4870541 - R1_DM LINE R1 -337 5019 4376 1 769 5624 0 3 0 chrUextra 24134215 24134859 -4869797 - LSU-rRNA_Dme rRNA rRNA -109 3791 3146 1 769 5443 3 2 2 chrUextra 24134959 24135603 -4869053 + Invader3_I LTR Gypsy 2941 3584 -1304 1 769 4719 17 0 2 chrUextra 24135703 24136279 -4868377 + FW_DM LINE Jockey 4118 4692 0 1 769 541 44 0 0 chrUextra 24136279 24136347 -4868309 - R1_DM LINE R1 -3947 1409 1342 1 769 2917 175 6 9 chrUextra 24136451 24137087 -4867569 + SAR_DM Satellite Satellite 246 879 -593 1 769 2786 12 0 0 chrUextra 24137191 24137530 -4867126 - R1_DM LINE R1 -4503 853 515 1 769 2652 3 7 0 chrUextra 24137527 24137835 -4866821 - LSU-rRNA_Dme rRNA rRNA -1252 2648 2339 1 769 2815 169 12 11 chrUextra 24137935 24138574 -4866082 - SAR_DM Satellite Satellite -603 869 230 1 769 1680 0 14 22 chrUextra 24138679 24138902 -4865754 - NTS_DM Other Other -19 221 1 1 769 1861 0 17 13 chrUextra 24138902 24139141 -4865515 - NTS_DM Other Other 0 240 1 1 769 1243 11 22 22 chrUextra 24139141 24139323 -4865333 - NTS_DM Other Other 0 240 59 1 769 2851 174 9 9 chrUextra 24139423 24140067 -4864589 - SAR_DM Satellite Satellite -399 1073 430 1 769 5347 2 0 0 chrUextra 24140167 24140799 -4863857 - LSU-rRNA_Dme rRNA rRNA -3051 849 218 1 769 2751 189 6 6 chrUextra 24140912 24141555 -4863101 + SAR_DM Satellite Satellite 237 879 -593 1 769 3049 160 11 9 chrUextra 24141655 24142299 -4862357 - SAR_DM Satellite Satellite -451 1021 377 1 769 1930 177 12 9 chrUextra 24142399 24143038 -4861618 - SAR_DM Satellite Satellite -443 640 1 1 769 5165 17 0 8 chrUextra 24143143 24143784 -4860872 + FW_DM LINE Jockey 1655 2290 -2402 1 769 5096 33 6 0 chrUextra 24143887 24144531 -4860125 - MDG1_I LTR Gypsy -2477 4119 3472 1 769 1635 5 18 14 chrUextra 24144631 24144848 -4859808 + NTS_DM Other Other 23 240 0 1 769 1847 4 17 13 chrUextra 24144848 24145087 -4859569 + NTS_DM Other Other 1 240 0 1 769 1301 6 0 18 chrUextra 24145087 24145252 -4859404 + NTS_DM Other Other 1 162 -78 1 769 2079 157 147 29 chrUextra 24145376 24146017 -4858639 - TART LINE telomeric -4751 9726 9040 1 769 576 0 0 0 chrUextra 24146119 24146186 -4858470 + LSU-rRNA_Dme rRNA rRNA 2515 2581 -1319 1 769 4936 7 0 2 chrUextra 24146184 24146763 -4857893 + R2_DM LINE R2 2558 3135 -472 1 769 1167 7 0 0 chrUextra 24146960 24147095 -4857561 + 5S_DM RNA RNA 1 135 0 1 769 1143 15 0 0 chrUextra 24147326 24147461 -4857195 + 5S_DM RNA RNA 1 135 0 1 769 2980 162 9 9 chrUextra 24147608 24148249 -4856407 + SAR_DM Satellite Satellite 293 933 -539 1 769 2614 184 7 8 chrUextra 24148351 24148958 -4855698 - SAR_DM Satellite Satellite -672 800 195 1 769 816 100 0 0 chrUextra 24148865 24148995 -4855661 + ARS406_DM Unknown Unknown 1 130 -223 1 769 4805 30 25 3 chrUextra 24149095 24149739 -4854917 - IDEFIX_I LTR Gypsy -674 4954 4297 1 769 250 33 0 0 chrUextra 24149892 24149922 -4854734 + Baggins1 LINE LOA 4727 4756 -697 1 769 708 97 241 0 chrUextra 24149930 24150075 -4854581 + FB4_DM DNA Tc1 3908 4087 -2 1 769 5381 16 2 5 chrUextra 24150583 24151227 -4853429 + Gypsy4_I LTR Gypsy 626 1267 -5021 1 769 5421 16 2 0 chrUextra 24151332 24151971 -4852685 - Gypsy6_I LTR Gypsy -1643 5369 4730 1 769 4018 98 87 0 chrUextra 24152071 24152715 -4851941 - TART LINE telomeric -12903 1574 875 1 769 2877 171 17 6 chrUextra 24152817 24153458 -4851198 + SAR_DM Satellite Satellite 238 885 -587 1 769 1770 167 15 10 chrUextra 24153559 24153958 -4850698 - SAR_DM Satellite Satellite -673 799 399 1 769 370 57 19 0 chrUextra 24153974 24154027 -4850629 + ARS406_DM Unknown Unknown 136 189 -164 1 769 1081 135 14 14 chrUextra 24153983 24154201 -4850455 - SAR_DM Satellite Satellite -614 858 641 1 769 1158 122 0 0 chrUextra 24154313 24154493 -4850163 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 769 3772 16 0 0 chrUextra 24154494 24154947 -4849709 + DM176_LTR LTR Gypsy 1 453 -54 1 769 2667 54 109 4 chrUextra 24155048 24155676 -4848980 + PROTOP_B DNA P 241 983 -170 1 769 2978 11 0 0 chrUextra 24155794 24156145 -4848511 + PROTOP DNA P 4130 4480 0 1 769 2420 24 0 0 chrUextra 24156145 24156435 -4848221 - R1_DM LINE R1 -2810 2546 2257 1 769 4946 51 0 0 chrUextra 24156535 24157179 -4847477 + IDEFIX_I LTR Gypsy 2218 2861 -2767 1 769 3400 2 0 5 chrUextra 24157279 24157676 -4846980 - SSU-rRNA_Dme rRNA rRNA -1600 395 1 1 769 32 0 0 0 chrUextra 24157808 24157840 -4846816 + AT_rich Low_complexity Low_complexity 1 32 0 1 769 2621 158 9 6 chrUextra 24158027 24158667 -4845989 - SAR_DM Satellite Satellite -514 641 1 1 769 2083 82 1 41 chrUextra 24158770 24159411 -4845245 - DMSAT6 Satellite Satellite -151 615 1 1 769 5469 0 3 3 chrUextra 24159511 24160155 -4844501 + R1_DM LINE R1 4046 4689 -667 1 769 596 183 154 122 chrUextra 24160999 24161342 -4843314 + TIRANT_LTR LTR Gypsy 11 364 -53 1 769 741 265 62 0 chrUextra 24161424 24161635 -4843021 + Gypsy2_I LTR Gypsy 1311 1534 -4601 1 769 2779 179 8 9 chrUextra 24161743 24162381 -4842275 - SAR_DM Satellite Satellite -641 831 195 1 769 1382 80 132 87 chrUextra 24162495 24162783 -4841873 - STALKER4_LTR LTR Gypsy -33 369 69 1 769 563 300 14 14 chrUextra 24162917 24163130 -4841526 - Invader2_I LTR Gypsy -641 3951 3739 1 769 1446 12 0 0 chrUextra 24163231 24163400 -4841256 + TRANSPAC_LTR LTR Gypsy 162 330 0 1 769 4021 6 2 4 chrUextra 24163400 24163875 -4840781 - SSU-rRNA_Dme rRNA rRNA -555 1440 967 1 769 5342 9 5 2 chrUextra 24163975 24164617 -4840039 - G_DM LINE Jockey -2405 1941 1298 1 769 4890 18 2 36 chrUextra 24165463 24166107 -4838549 + G_DM LINE Jockey 3449 4070 -276 1 769 699 93 0 0 chrUextra 24166207 24166325 -4838331 + (CAAGA)n Simple_repeat Simple_repeat 5 122 0 1 769 5858 0 0 2 chrUextra 24166951 24167595 -4837061 + SSU-rRNA_Dme rRNA rRNA 486 1128 -867 1 769 1582 20 92 0 chrUextra 24168144 24168339 -4836317 + PROTOP_B DNA P 1 213 -940 1 769 4272 83 8 25 chrUextra 24168439 24169082 -4835574 + CIRCE LINE Composite 4349 4980 -1376 1 769 2765 243 47 31 chrUextra 24169183 24170563 -4834093 + SAR_DM Satellite Satellite 1 1401 -581 1 769 31 112 0 0 chrUextra 24170683 24170826 -4833830 + AT_rich Low_complexity Low_complexity 1 143 0 1 769 2574 207 8 8 chrUextra 24171416 24172049 -4832607 - SAR_DM Satellite Satellite -645 827 195 1 769 488 17 0 17 chrUextra 24172159 24172218 -4832438 - NTS_DM Other Other -182 58 1 1 769 1813 21 17 17 chrUextra 24172218 24172458 -4832198 - NTS_DM Other Other 0 240 1 1 769 1835 17 17 17 chrUextra 24172458 24172698 -4831958 - NTS_DM Other Other 0 240 1 1 769 636 30 38 38 chrUextra 24172698 24172803 -4831853 - NTS_DM Other Other 0 240 136 1 769 957 296 65 29 chrUextra 24172912 24173541 -4831115 - SAR_DM Satellite Satellite -443 1029 378 1 769 2689 164 23 26 chrUextra 24173654 24175020 -4829636 + DMSAT6 Satellite Satellite 1 1361 -3 1 769 5529 20 0 2 chrUextra 24175138 24175779 -4828877 + ROO_I LTR Pao 2336 2975 -5281 1 769 3193 154 14 11 chrUextra 24175880 24176523 -4828133 - SAR_DM Satellite Satellite -456 1016 372 1 769 3000 168 19 10 chrUextra 24176635 24177262 -4827394 + SAR_DM Satellite Satellite 326 958 -514 1 769 5331 34 5 2 chrUextra 24177367 24178011 -4826645 + R1_DM LINE R1 4487 5132 -224 1 769 5430 28 6 3 chrUextra 24178112 24178755 -4825901 + CIRCE LINE Composite 2799 3443 -2913 1 769 5859 0 0 2 chrUextra 24178855 24179499 -4825157 - DOC LINE Jockey -534 4191 3549 1 769 816 10 10 0 chrUextra 24179599 24179696 -4824960 + NTS_DM Other Other 36 133 -107 1 769 1304 18 0 6 chrUextra 24179696 24179861 -4824795 + NTS_DM Other Other 38 201 -39 1 769 907 9 0 27 chrUextra 24179913 24180025 -4824631 + NTS_DM Other Other 25 133 -107 1 769 1304 18 0 6 chrUextra 24180025 24180190 -4824466 + NTS_DM Other Other 38 201 -39 1 769 1693 10 0 68 chrUextra 24180346 24180567 -4824089 + DM176_LTR LTR Gypsy 78 283 -224 1 769 2104 20 16 0 chrUextra 24180568 24180821 -4823835 + DM176_LTR LTR Gypsy 251 507 0 1 769 216 0 0 0 chrUextra 24180823 24180847 -4823809 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 769 1201 0 7 0 chrUextra 24180847 24180987 -4823669 - QUASIMODO_LTR LTR Gypsy 0 658 518 1 769 5360 14 16 0 chrUextra 24181088 24181731 -4822925 + ACCORD2_I LTR Gypsy 3504 4156 -3056 1 769 1324 24 6 40 chrUextra 24181831 24182005 -4822651 + G5A_DM LINE Jockey 2671 2838 -3 1 769 493 284 123 27 chrUextra 24182031 24182465 -4822191 - BURDOCK_I LTR Gypsy -4008 1852 1193 1 769 1145 273 26 22 chrUextra 24182582 24183061 -4821595 - ROVER-I_DM LTR Gypsy -5362 1222 383 1 769 5614 20 0 0 chrUextra 24183319 24183963 -4820693 + R1_DM LINE R1 1906 2549 -2807 1 769 2919 173 11 12 chrUextra 24184068 24184707 -4819949 - SAR_DM Satellite Satellite -396 1076 439 1 769 5451 30 5 0 chrUextra 24185551 24186195 -4818461 + R1_DM LINE R1 2865 3511 -1845 1 769 3709 59 40 2 chrUextra 24186319 24186928 -4817728 - PROTOP_A DNA P 0 1105 570 1 769 3019 177 11 8 chrUextra 24187039 24187681 -4816975 - SAR_DM Satellite Satellite -450 1022 379 1 769 904 51 0 0 chrUextra 24188529 24188646 -4816010 + ARS406_DM Unknown Unknown 73 189 -164 1 769 2203 190 77 34 chrUextra 24188543 24189170 -4815486 - SAR_DM Satellite Satellite -203 1269 616 1 769 3877 2 0 2 chrUextra 24189380 24189809 -4814847 + ROO_LTR LTR Pao 1 428 0 1 769 774 12 0 0 chrUextra 24189809 24189895 -4814761 + ROO_I LTR Pao 1 86 -8170 1 769 5469 28 3 0 chrUextra 24190016 24190659 -4813997 - R1_DM LINE R1 -17 5339 4695 1 769 1183 20 0 0 chrUextra 24190759 24190910 -4813746 + G2_DM LINE Jockey 2950 3100 -2 1 769 2080 178 7 16 chrUextra 24190910 24191343 -4813313 - HETA LINE telomeric -2198 3883 3455 1 769 237 200 16 32 chrUextra 24191341 24191403 -4813253 - HETA LINE telomeric -602 5479 5419 1 769 5088 27 28 8 chrUextra 24191503 24192147 -4812509 - PROTOP DNA P -3776 704 48 1 769 2994 185 8 8 chrUextra 24192248 24192891 -4811765 + SAR_DM Satellite Satellite 272 914 -558 1 769 3012 18 6 19 chrUextra 24193735 24194379 -4810277 + HETRP_DM Satellite Satellite 1 636 -1456 1 769 4162 11 0 0 chrUextra 24194479 24194954 -4809702 + G2_DM LINE Jockey 2628 3102 0 1 769 1272 12 18 0 chrUextra 24194953 24195123 -4809533 - STALKER4_I LTR Gypsy -66 6464 6292 1 769 1842 298 12 19 chrUextra 24195228 24195867 -4808789 + MICROPIA_I LTR Gypsy 2748 3382 -1094 1 769 5507 11 5 0 chrUextra 24195967 24196611 -4808045 + IVK_DM LINE I 1390 2036 -3366 1 769 1298 204 150 34 chrUextra 24196844 24197355 -4807301 + Gypsy12_LTR LTR Gypsy 1164 1711 -569 1 769 5349 23 8 0 chrUextra 24197455 24198099 -4806557 - DOC2_DM LINE Jockey -3247 1546 898 1 769 2736 163 31 42 chrUextra 24198202 24198843 -4805813 - SAR_DM Satellite Satellite -627 845 212 1 769 5420 20 0 2 chrUextra 24198943 24199587 -4805069 + STALKER4_I LTR Gypsy 2392 3034 -3496 1 769 2901 174 8 20 chrUextra 24199687 24200331 -4804325 + SAR_DM Satellite Satellite 465 1100 -372 1 769 3107 175 6 9 chrUextra 24200435 24201074 -4803582 - SAR_DM Satellite Satellite -411 1061 425 1 769 5710 14 0 0 chrUextra 24201175 24201819 -4802837 - Gypsy_I LTR Gypsy -101 6406 5763 1 769 21 89 0 0 chrUextra 24202242 24202298 -4802358 + AT_rich Low_complexity Low_complexity 1 56 0 1 769 2240 0 4 0 chrUextra 24202317 24202563 -4802093 - SSU-rRNA_Dme rRNA rRNA 0 1995 1749 1 769 2588 202 65 22 chrUextra 24202665 24203307 -4801349 + SAR_DM Satellite Satellite 1 669 -216 1 769 1152 22 0 0 chrUextra 24203407 24203546 -4801110 + (TCTTG)n Simple_repeat Simple_repeat 2 140 0 1 769 2511 206 21 22 chrUextra 24204151 24204795 -4799861 + SAR_DM Satellite Satellite 1 643 -216 1 769 3251 245 27 23 chrUextra 24204895 24206120 -4798536 + SAR_DM Satellite Satellite 1 1230 -558 1 769 942 152 73 11 chrUextra 24206034 24206280 -4798376 - ARS406_DM Unknown Unknown 0 360 43 1 769 5497 25 3 0 chrUextra 24206385 24207027 -4797629 + BATUMI_I LTR Pao 4697 5340 -2623 1 769 2662 191 5 22 chrUextra 24207127 24207749 -4796907 + SAR_DM Satellite Satellite 508 1118 -354 1 769 380 198 9 19 chrUextra 24207663 24207771 -4796885 - XDMR_DM Unknown Unknown 0 360 254 1 769 32 0 0 0 chrUextra 24207945 24207977 -4796679 + AT_rich Low_complexity Low_complexity 1 32 0 1 769 3714 2 0 0 chrUextra 24208109 24208515 -4796141 + SSU-rRNA_Dme rRNA rRNA 1 406 -1589 1 769 699 99 66 0 chrUextra 24208615 24208736 -4795920 - ARS406_DM Unknown Unknown -224 129 1 1 769 2692 178 31 8 chrUextra 24208651 24209257 -4795399 + SAR_DM Satellite Satellite 195 814 -658 1 769 3058 170 12 9 chrUextra 24209359 24210000 -4794656 - SAR_DM Satellite Satellite -484 988 346 1 769 2753 182 25 25 chrUextra 24210103 24210746 -4793910 + SAR_DM Satellite Satellite 465 1107 -365 1 769 768 40 0 0 chrUextra 24210849 24210949 -4793707 + (CAAGA)n Simple_repeat Simple_repeat 2 101 0 1 769 1560 11 0 0 chrUextra 24211593 24211767 -4792889 - ROO_I LTR Pao -1095 7161 6988 1 769 4151 0 0 0 chrUextra 24211754 24212233 -4792423 - ROO_I LTR Pao -3060 5196 4718 1 769 5119 48 3 2 chrUextra 24212345 24212976 -4791680 + DIVER2_I LTR Pao 711 1342 -2805 1 769 2434 183 12 19 chrUextra 24213076 24213640 -4791016 + SAR_DM Satellite Satellite 517 1076 -396 1 769 398 118 0 0 chrUextra 24213651 24213719 -4790937 + SAR_DM Satellite Satellite 543 610 -862 1 769 285 370 0 0 chrUextra 24213819 24214022 -4790634 - Invader3_I LTR Gypsy -703 4185 3983 1 769 2928 167 19 22 chrUextra 24215306 24215948 -4788708 - SAR_DM Satellite Satellite -577 895 256 1 769 4965 30 3 6 chrUextra 24216048 24216691 -4787965 - PROTOP_A DNA P -304 801 161 1 769 4248 42 16 70 chrUextra 24216791 24217434 -4787222 + BATUMI_I LTR Pao 711 1318 -6645 1 769 21 95 0 0 chrUextra 24217689 24217752 -4786904 + AT_rich Low_complexity Low_complexity 1 63 0 1 769 3294 0 0 63 chrUextra 24217764 24218177 -4786479 + LSU-rRNA_Dme rRNA rRNA 1 387 -3513 1 769 5674 3 36 0 chrUextra 24218277 24218920 -4785736 + R2_DM LINE R2 591 1256 -2351 1 769 58 15 0 0 chrUextra 24219082 24219147 -4785509 + AT_rich Low_complexity Low_complexity 1 65 0 1 769 22 35 0 0 chrUextra 24219322 24219351 -4785305 + AT_rich Low_complexity Low_complexity 1 29 0 1 769 4549 30 5 65 chrUextra 24220506 24221149 -4783507 + BATUMI_I LTR Pao 2572 3175 -4788 1 769 1862 60 8 0 chrUextra 24221249 24221497 -4783159 - Baggins1 LINE LOA -413 5040 4791 1 769 2226 19 4 4 chrUextra 24221992 24222256 -4782400 - STALKER4_LTR LTR Gypsy -138 264 1 1 769 2856 16 8 3 chrUextra 24222256 24222635 -4782021 - STALKER4_I LTR Gypsy 0 6530 6150 1 769 921 84 5 20 chrUextra 24222735 24223378 -4781278 + RSP Satellite Satellite 1 633 0 1 769 2071 4 8 4 chrUextra 24223478 24223723 -4780933 + LSU-rRNA_Dme rRNA rRNA 1543 1788 -2112 1 769 3183 0 0 6 chrUextra 24223767 24224121 -4780535 + LSU-rRNA_Dme rRNA rRNA 1788 2139 -1761 1 769 2377 108 14 31 chrUextra 24224221 24224864 -4779792 - DMSAT6 Satellite Satellite -3 632 1 1 769 2624 189 10 10 chrUextra 24224964 24225572 -4779084 - SAR_DM Satellite Satellite -673 799 192 1 769 880 92 0 0 chrUextra 24225476 24225607 -4779049 + ARS406_DM Unknown Unknown 1 131 -222 1 769 4922 87 0 0 chrUextra 24225707 24226350 -4778306 + Gypsy12_I LTR Gypsy 3143 3785 -1761 1 769 4184 16 0 2 chrUextra 24226604 24227093 -4777563 + G2_DM LINE Jockey 2196 2683 -419 1 769 2723 177 9 25 chrUextra 24227201 24227834 -4776822 + SAR_DM Satellite Satellite 496 1118 -354 1 769 452 136 10 24 chrUextra 24227937 24228053 -4776603 - FB4_DM DNA Tc1 -4027 62 2 1 769 1404 154 37 0 chrUextra 24228089 24228361 -4776295 - SAR_DM Satellite Satellite -658 814 533 1 769 909 167 31 0 chrUextra 24228373 24228565 -4776091 - SAR_DM Satellite Satellite -690 782 585 1 769 1368 0 0 0 chrUextra 24229170 24229322 -4775334 + (CACAA)n Simple_repeat Simple_repeat 4 155 0 1 769 5400 17 22 0 chrUextra 24229422 24230065 -4774591 - ROO_I LTR Pao -6330 1926 1270 1 769 2960 175 17 8 chrUextra 24230169 24230808 -4773848 - SAR_DM Satellite Satellite -577 895 251 1 769 4769 2 86 0 chrUextra 24230908 24231550 -4773106 - DM176_I LTR Gypsy -1310 5110 4414 1 769 557 0 0 0 chrUextra 24231651 24231716 -4772940 - QUASIMODO_LTR LTR Gypsy -441 217 153 1 769 4396 10 7 0 chrUextra 24231712 24232294 -4772362 - QUASIMODO_I LTR Gypsy -74 5986 5401 1 769 901 55 0 0 chrUextra 24232394 24232504 -4772152 + R1_DM LINE R1 1281 1390 -3966 1 769 4300 30 26 2 chrUextra 24232505 24233037 -4771619 - FW_DM LINE Jockey -4 4688 4144 1 769 1788 191 17 6 chrUextra 24233137 24233240 -4771416 - SAR_DM Satellite Satellite -723 650 514 1 769 1083 89 0 0 chrUextra 24233240 24233398 -4771258 + ARS406_DM Unknown Unknown 1 158 -195 1 769 1788 191 17 6 chrUextra 24233398 24233780 -4770876 - SAR_DM Satellite Satellite -723 513 1 1 769 277 106 0 21 chrUextra 24234146 24234194 -4770462 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 769 372 49 65 16 chrUextra 24234216 24234278 -4770378 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 769 919 183 102 15 chrUextra 24234277 24234482 -4770174 - DMLTR5 LTR Gypsy 0 266 44 1 769 759 0 11 0 chrUextra 24234623 24234712 -4769944 + ROO_I LTR Pao 8167 8256 0 1 769 3931 0 0 0 chrUextra 24234712 24235140 -4769516 + ROO_LTR LTR Pao 1 428 0 1 769 264 130 0 0 chrUextra 24235366 24235412 -4769244 - ARS406_DM Unknown Unknown -307 46 1 1 769 3409 235 44 23 chrUextra 24235372 24236714 -4767942 + SAR_DM Satellite Satellite 1 1370 -593 1 769 1072 50 0 0 chrUextra 24236611 24236751 -4767905 - ARS406_DM Unknown Unknown -164 189 50 1 769 1416 59 204 0 chrUextra 24237928 24238149 -4766507 - Invader2_LTR LTR Gypsy 0 266 1 1 769 710 45 0 0 chrUextra 24238149 24238238 -4766418 - Invader2_I LTR Gypsy 0 4592 4504 1 769 4724 18 39 0 chrUextra 24238340 24238909 -4765747 - PROTOP_A DNA P -511 594 4 1 769 3184 169 9 8 chrUextra 24239084 24239723 -4764933 + SAR_DM Satellite Satellite 369 1008 -464 1 769 1426 43 13 33 chrUextra 24239825 24240032 -4764624 - BATUMI_LTR LTR Pao -62 210 35 1 769 3231 62 25 5 chrUextra 24240032 24240467 -4764189 - BATUMI_I LTR Pao 0 7963 7520 1 769 557 76 0 0 chrUextra 24240570 24240649 -4764007 + HETA LINE telomeric 1479 1557 -4524 1 769 1918 66 7 39 chrUextra 24240648 24240930 -4763726 + HETA LINE telomeric 1894 2166 -3915 1 769 1999 99 25 0 chrUextra 24240928 24241210 -4763446 + HETA LINE telomeric 2429 2717 -3364 1 769 1019 82 8 17 chrUextra 24241320 24241953 -4762703 + RSP Satellite Satellite 1 627 0 1 769 5523 0 0 3 chrUextra 24242053 24242696 -4761960 + ROO_I LTR Pao 778 1418 -6838 1 769 3094 169 8 8 chrUextra 24242796 24243428 -4761228 - SAR_DM Satellite Satellite -515 957 326 1 769 5531 26 0 0 chrUextra 24243539 24244181 -4760475 + R1_DM LINE R1 3916 4557 -799 1 769 333 0 0 0 chrUextra 24244282 24244319 -4760337 + (TTCTC)n Simple_repeat Simple_repeat 4 40 0 1 769 2591 193 22 37 chrUextra 24245026 24245666 -4758990 - SAR_DM Satellite Satellite -1044 630 1 1 769 2618 13 3 0 chrUextra 24245768 24246070 -4758586 + R1_DM LINE R1 4764 5066 -290 1 769 988 35 0 0 chrUextra 24246067 24246181 -4758475 + R1_DM LINE R1 5243 5356 0 1 769 1396 76 20 0 chrUextra 24246214 24246411 -4758245 + R1_DM LINE R1 1 201 -5155 1 769 2289 207 13 26 chrUextra 24246516 24247136 -4757520 + SAR_DM Satellite Satellite 507 1118 -354 1 769 306 260 10 0 chrUextra 24247054 24247154 -4757502 - XDMR_DM Unknown Unknown -1 359 259 1 769 5515 26 2 0 chrUextra 24247254 24247897 -4756759 - R1_DM LINE R1 -1875 3481 2838 1 96 1772 312 8 8 chrUextra 24247997 24248627 -4756029 - GTWIN_I LTR Gypsy -2813 3608 2979 1 770 5685 3 0 0 chrUextra 24248740 24249383 -4755273 - DOC LINE Jockey -3357 1368 726 1 770 1187 50 0 0 chrUextra 24249483 24249623 -4755033 + R1_DM LINE R1 1689 1828 -3528 1 770 4223 40 0 2 chrUextra 24249621 24250126 -4754530 + R1_DM LINE R1 1317 1820 -3536 1 770 3065 171 11 9 chrUextra 24250226 24250869 -4753787 - SAR_DM Satellite Satellite -447 1025 382 1 770 2790 193 25 8 chrUextra 24250970 24251612 -4753044 + SAR_DM Satellite Satellite 207 859 -613 1 770 1304 18 0 6 chrUextra 24251775 24251940 -4752716 - NTS_DM Other Other -39 201 38 1 770 907 9 0 27 chrUextra 24251940 24252052 -4752604 - NTS_DM Other Other -107 133 25 1 770 22 56 0 0 chrUextra 24252078 24252114 -4752542 + AT_rich Low_complexity Low_complexity 1 36 0 1 770 269 125 0 0 chrUextra 24252127 24252167 -4752489 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 262 150 0 0 chrUextra 24252210 24252250 -4752406 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 262 150 0 0 chrUextra 24252302 24252342 -4752314 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 2928 176 25 11 chrUextra 24252455 24253098 -4751558 - SAR_DM Satellite Satellite -399 1073 422 1 770 285 53 0 0 chrUextra 24253941 24253979 -4750677 - ARS406_DM Unknown Unknown -226 127 90 1 770 2690 185 5 9 chrUextra 24253984 24254567 -4750089 + SAR_DM Satellite Satellite 496 1076 -396 1 770 4313 6 0 2 chrUextra 24254684 24255163 -4749493 - SSU-rRNA_Dme rRNA rRNA -1517 478 1 1 770 32 0 0 0 chrUextra 24255295 24255327 -4749329 + AT_rich Low_complexity Low_complexity 1 32 0 1 770 1940 184 18 6 chrUextra 24255427 24256069 -4748587 + SAR_DM Satellite Satellite 1 649 -539 1 770 1066 19 25 25 chrUextra 24256170 24256330 -4748326 + NTS_DM Other Other 81 240 0 1 770 1835 17 17 17 chrUextra 24256330 24256570 -4748086 + NTS_DM Other Other 1 240 0 1 770 1783 21 17 21 chrUextra 24256570 24256811 -4747845 + NTS_DM Other Other 1 240 0 1 770 5413 3 25 2 chrUextra 24256913 24257556 -4747100 - ROO_I LTR Pao -7079 1177 520 1 770 484 119 35 12 chrUextra 24257711 24257796 -4746860 - NTS_DM Other Other -150 90 4 1 770 1355 6 0 18 chrUextra 24257906 24258071 -4746585 - NTS_DM Other Other -78 162 1 1 770 1799 9 18 13 chrUextra 24258071 24258299 -4746357 - NTS_DM Other Other 0 240 12 1 770 28 48 0 0 chrUextra 24258535 24258577 -4746079 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 514 119 36 0 chrUextra 24258850 24258934 -4745722 - NTS_DM Other Other -150 90 4 1 770 2751 178 13 11 chrUextra 24259142 24259760 -4744896 - SAR_DM Satellite Satellite -662 810 192 1 770 650 141 0 8 chrUextra 24259663 24259785 -4744871 + ARS406_DM Unknown Unknown 1 121 -232 1 770 21 89 0 0 chrUextra 24259996 24260052 -4744604 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 4190 0 2 0 chrUextra 24260071 24260528 -4744128 - SSU-rRNA_Dme rRNA rRNA 0 1995 1538 1 770 3090 169 22 9 chrUextra 24260630 24261271 -4743385 + SAR_DM Satellite Satellite 369 1017 -455 1 770 2057 57 67 2 chrUextra 24261371 24261790 -4742866 - PROTOP_B DNA P -399 754 420 1 770 226 0 0 0 chrUextra 24261790 24261817 -4742839 + PROTOP_B DNA P 1 27 -1126 1 770 1680 5 0 0 chrUextra 24261816 24262014 -4742642 - G2_DM LINE Jockey -5 3097 2900 1 770 32 0 0 0 chrUextra 24262385 24262417 -4742239 + AT_rich Low_complexity Low_complexity 1 32 0 1 770 1877 5 0 0 chrUextra 24262549 24262757 -4741899 + SSU-rRNA_Dme rRNA rRNA 1 208 -1787 1 770 2963 176 13 8 chrUextra 24263612 24264242 -4740414 + SAR_DM Satellite Satellite 326 958 -514 1 770 336 0 0 0 chrUextra 24264343 24264386 -4740270 + NTS_DM Other Other 91 133 -107 1 770 851 0 0 0 chrUextra 24264386 24264482 -4740174 + NTS_DM Other Other 38 133 -107 1 770 1472 20 20 20 chrUextra 24264482 24264685 -4739971 + NTS_DM Other Other 38 240 0 1 770 1791 25 17 17 chrUextra 24264685 24264925 -4739731 + NTS_DM Other Other 1 240 0 1 770 546 16 0 0 chrUextra 24264925 24264986 -4739670 + NTS_DM Other Other 1 61 -179 1 770 4696 3 177 3 chrUextra 24265086 24265729 -4738927 + MDG1_I LTR Gypsy 5749 6503 -93 1 770 5499 25 0 0 chrUextra 24266572 24267215 -4737441 - R1_DM LINE R1 -2147 3209 2567 1 770 2572 102 16 25 chrUextra 24267315 24267958 -4736698 + DMSAT6 Satellite Satellite 1 636 -69 1 770 2671 186 66 23 chrUextra 24268058 24268701 -4735955 - SAR_DM Satellite Satellite -673 670 1 1 770 1931 161 13 5 chrUextra 24269544 24269926 -4734730 - SAR_DM Satellite Satellite -708 764 380 1 770 1574 40 238 12 chrUextra 24269935 24270187 -4734469 + DOC2_DM LINE Jockey 7 315 -4478 1 770 5678 6 0 3 chrUextra 24270287 24270930 -4733726 - R1_DM LINE R1 -304 5052 4412 1 770 860 20 0 0 chrUextra 24271033 24271135 -4733521 + NTS_DM Other Other 32 133 -107 1 770 1304 18 0 6 chrUextra 24271135 24271300 -4733356 + NTS_DM Other Other 38 201 -39 1 770 924 18 0 26 chrUextra 24271347 24271464 -4733192 + NTS_DM Other Other 20 133 -107 1 770 1284 24 0 6 chrUextra 24271464 24271629 -4733027 + NTS_DM Other Other 38 201 -39 1 770 2837 163 26 26 chrUextra 24272549 24273159 -4731497 + SAR_DM Satellite Satellite 275 884 -588 1 770 2441 258 3 3 chrUextra 24273263 24273902 -4730754 + ROVER-I_DM LTR Gypsy 2875 3513 -3071 1 770 4993 0 5 73 chrUextra 24274746 24275388 -4729268 + LSU-rRNA_Dme rRNA rRNA 1545 2142 -1758 1 770 219 36 0 0 chrUextra 24275531 24275559 -4729097 + (T)n Simple_repeat Simple_repeat 1 28 0 1 770 235 170 0 19 chrUextra 24276002 24276056 -4728600 + ROO_I LTR Pao 679 731 -7525 1 770 3423 39 20 11 chrUextra 24276974 24277419 -4727237 - BATUMI_I LTR Pao -7514 449 1 1 770 1431 47 5 35 chrUextra 24277419 24277617 -4727039 - BATUMI_LTR LTR Pao 0 272 81 1 770 1539 0 0 0 chrUextra 24277717 24277888 -4726768 + (GAGAA)n Simple_repeat Simple_repeat 2 172 0 1 770 4384 15 4 6 chrUextra 24278460 24279002 -4725654 + PROTOP DNA P 3940 4480 0 1 770 572 98 0 0 chrUextra 24279002 24279084 -4725572 + TART LINE telomeric 6926 7007 -7470 1 770 21 89 0 0 chrUextra 24279555 24279611 -4725045 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 1905 0 0 0 chrUextra 24279630 24279846 -4724810 - SSU-rRNA_Dme rRNA rRNA 0 1995 1780 1 770 2757 158 15 10 chrUextra 24279946 24280548 -4724108 + SAR_DM Satellite Satellite 389 993 -479 1 770 5303 20 0 0 chrUextra 24280689 24281332 -4723324 + DOC2_DM LINE Jockey 2425 3067 -1726 1 770 2482 52 6 0 chrUextra 24281441 24281768 -4722888 + DMRT1A LINE R1 4844 5172 -11 1 770 288 0 0 0 chrUextra 24282175 24282207 -4722449 + (CACAA)n Simple_repeat Simple_repeat 4 35 0 1 770 1520 11 0 6 chrUextra 24282207 24282386 -4722270 + (CACGA)n Simple_repeat Simple_repeat 1 178 0 1 770 3605 5 0 0 chrUextra 24282394 24282818 -4721838 - DMRT1B LINE R1 -193 4990 4567 1 770 2846 187 5 3 chrUextra 24282918 24283555 -4721101 - SAR_DM Satellite Satellite -611 861 224 1 770 5466 0 3 5 chrUextra 24283661 24284304 -4720352 + SSU-rRNA_Dme rRNA rRNA 830 1471 -524 1 770 1655 0 0 0 chrUextra 24284404 24284592 -4720064 + LSU-rRNA_Dme rRNA rRNA 2445 2632 -1268 1 770 3910 2 4 0 chrUextra 24284592 24285047 -4719609 + R1_DM LINE R1 1 457 -4899 1 770 2650 188 11 9 chrUextra 24285147 24285790 -4718866 + SAR_DM Satellite Satellite 274 917 -555 1 770 5166 9 0 0 chrUextra 24285890 24286533 -4718123 - QUASIMODO_I LTR Gypsy -1305 4755 4113 1 770 954 20 26 26 chrUextra 24286633 24286785 -4717871 + NTS_DM Other Other 89 240 0 1 770 1756 17 17 17 chrUextra 24286785 24287025 -4717631 + NTS_DM Other Other 1 240 0 1 770 891 10 0 0 chrUextra 24287025 24287129 -4717527 + NTS_DM Other Other 1 104 -136 1 770 1296 0 0 0 chrUextra 24287129 24287276 -4717380 - TRANSPAC_LTR LTR Gypsy 0 330 184 1 770 321 274 107 89 chrUextra 24287644 24287924 -4716732 + Invader1_LTR LTR Gypsy 84 368 -55 1 770 5563 2 0 0 chrUextra 24288119 24288761 -4715895 - R1_DM LINE R1 -2945 2411 1770 1 770 22 99 0 0 chrUextra 24288861 24288932 -4715724 + AT_rich Low_complexity Low_complexity 1 71 0 1 770 3054 7 0 24 chrUextra 24289603 24290025 -4714631 + STALKER4_I LTR Gypsy 6119 6530 0 1 770 1774 18 9 0 chrUextra 24290025 24290245 -4714411 + STALKER4_LTR LTR Gypsy 1 222 -180 1 770 2480 80 3 8 chrUextra 24290559 24290986 -4713670 + DMRT1C LINE R1 2118 2593 -2850 1 770 2192 97 24 64 chrUextra 24291087 24291719 -4712937 + DMSAT6 Satellite Satellite 1 606 -21 1 770 387 0 0 0 chrUextra 24291829 24291872 -4712784 + (ATAAG)n Simple_repeat Simple_repeat 2 44 0 1 770 1620 2 0 0 chrUextra 24293313 24293784 -4710872 + (CTAGT)n Simple_repeat Simple_repeat 1 471 0 1 770 911 101 0 6 chrUextra 24293784 24293952 -4710704 + (TCTTG)n Simple_repeat Simple_repeat 3 170 0 1 770 1903 181 24 22 chrUextra 24294080 24294537 -4710119 - Stalker2_I LTR Gypsy -6654 748 291 1 770 28 48 0 0 chrUextra 24294544 24294586 -4710070 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 312 251 258 56 chrUextra 24294821 24295019 -4709637 - Gypsy3_I LTR Gypsy -5780 397 160 1 770 567 229 16 66 chrUextra 24295252 24295434 -4709222 - Gypsy3_LTR LTR Gypsy -6 392 220 1 770 4643 6 115 0 chrUextra 24295539 24296181 -4708475 + DOC LINE Jockey 2394 3109 -1616 1 770 32 0 0 0 chrUextra 24296308 24296340 -4708316 + AT_rich Low_complexity Low_complexity 1 32 0 1 770 28 48 0 0 chrUextra 24296668 24296710 -4707946 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 246 150 0 0 chrUextra 24297061 24297101 -4707555 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 22 56 0 0 chrUextra 24297106 24297142 -4707514 + AT_rich Low_complexity Low_complexity 1 36 0 1 770 3863 0 2 4 chrUextra 24297214 24297665 -4706991 - LSU-rRNA_Dme rRNA rRNA 0 3900 3451 1 770 5151 37 3 0 chrUextra 24297765 24298407 -4706249 + DMCR1A LINE CR1 3402 4045 -425 1 770 2868 175 9 6 chrUextra 24298507 24299145 -4705511 - SAR_DM Satellite Satellite -587 885 246 1 770 2769 184 6 9 chrUextra 24299992 24300630 -4704026 - SAR_DM Satellite Satellite -645 827 192 1 770 5005 47 0 9 chrUextra 24300733 24301375 -4703281 + R1_DM LINE R1 1243 1878 -3478 1 770 2546 178 38 13 chrUextra 24301480 24302113 -4702543 - SAR_DM Satellite Satellite -425 1047 399 1 770 34 24 0 0 chrUextra 24302415 24302456 -4702200 + AT_rich Low_complexity Low_complexity 1 41 0 1 770 806 94 0 0 chrUextra 24302959 24303086 -4701570 - ARS406_DM Unknown Unknown -226 127 1 1 770 2737 169 8 8 chrUextra 24302993 24303601 -4701055 + SAR_DM Satellite Satellite 195 802 -670 1 770 1516 186 190 51 chrUextra 24303701 24304306 -4700350 + TART LINE telomeric 9801 10489 -3988 1 770 4648 67 0 5 chrUextra 24304443 24305085 -4699571 + IDEFIX_I LTR Gypsy 2429 3067 -2561 1 770 5323 0 0 0 chrUextra 24305185 24305827 -4698829 - TIRANT_I LTR Gypsy -802 6890 6249 1 770 1801 9 0 5 chrUextra 24305927 24306141 -4698515 + STALKER4_LTR LTR Gypsy 190 402 0 1 770 1803 177 7 12 chrUextra 24306163 24306569 -4698087 + SAR_DM Satellite Satellite 630 1033 -439 1 770 5295 13 0 16 chrUextra 24306670 24307311 -4697345 - CIRCE LINE Composite -1892 4464 3834 1 770 5271 22 5 0 chrUextra 24307411 24308053 -4696603 + R1_DM LINE R1 2243 2887 -2469 1 770 5407 3 5 3 chrUextra 24308153 24308795 -4695861 - LSU-rRNA_Dme rRNA rRNA -2152 1748 1106 1 770 2436 207 9 10 chrUextra 24308899 24309537 -4695119 + SAR_DM Satellite Satellite 1 637 -396 1 770 5178 31 0 0 chrUextra 24309637 24310279 -4694377 + R1_DM LINE R1 2715 3356 -2000 1 770 5555 2 2 2 chrUextra 24310379 24311021 -4693635 - SSU-rRNA_Dme rRNA rRNA -57 1938 1297 1 770 5408 2 0 0 chrUextra 24311121 24311763 -4692893 - ROO_I LTR Pao -2910 5346 4705 1 770 457 19 0 0 chrUextra 24311863 24311917 -4692739 - NTS_DM Other Other -186 54 1 1 770 1756 17 17 17 chrUextra 24311917 24312157 -4692499 - NTS_DM Other Other 0 240 1 1 770 1438 15 20 20 chrUextra 24312157 24312360 -4692296 - NTS_DM Other Other 0 240 38 1 770 832 9 9 27 chrUextra 24312360 24312471 -4692185 - NTS_DM Other Other -107 133 25 1 770 3047 163 9 8 chrUextra 24312605 24313247 -4691409 + SAR_DM Satellite Satellite 386 1028 -444 1 770 2837 173 9 8 chrUextra 24313349 24313989 -4690667 + SAR_DM Satellite Satellite 230 870 -602 1 770 1452 151 11 7 chrUextra 24314089 24314641 -4690015 - SAR_DM Satellite Satellite -808 553 1 1 770 460 133 0 11 chrUextra 24314640 24314731 -4689925 + ARS406_DM Unknown Unknown 14 103 -250 1 770 5359 9 0 2 chrUextra 24314831 24315469 -4689187 - ROO_I LTR Pao -2601 5655 5019 1 770 4183 53 3 21 chrUextra 24315635 24316215 -4688441 + CIRCE LINE Composite 1888 2457 -3899 1 770 1875 0 0 5 chrUextra 24316740 24316957 -4687699 - SSU-rRNA_Dme rRNA rRNA 0 1995 1780 1 770 2465 13 3 13 chrUextra 24317057 24317366 -4687290 + BATUMI_I LTR Pao 6696 7001 -962 1 770 2346 33 75 0 chrUextra 24317392 24317699 -4686957 - BATUMI_I LTR Pao -1543 6420 6091 1 770 1426 64 5 10 chrUextra 24317803 24318007 -4686649 - BATUMI_I LTR Pao -7760 203 1 1 770 2032 32 3 31 chrUextra 24318007 24318298 -4686358 - BATUMI_I LTR Pao -679 7284 7002 1 770 518 56 65 32 chrUextra 24318314 24318407 -4686249 - PROTOP DNA P -459 4021 3926 1 770 291 198 121 47 chrUextra 24319049 24319181 -4685475 - G_DM LINE Jockey -1749 293 157 1 770 488 119 36 0 chrUextra 24319357 24319441 -4685215 + NTS_DM Other Other 4 90 -150 1 770 28 48 0 0 chrUextra 24319714 24319756 -4684900 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 1528 21 5 5 chrUextra 24320025 24320220 -4684436 - R1_DM LINE R1 -1436 3920 3726 1 770 3942 4 0 0 chrUextra 24320212 24320667 -4683989 - LSU-rRNA_Dme rRNA rRNA -1258 2642 2188 1 770 2679 178 9 9 chrUextra 24320767 24321397 -4683259 - SAR_DM Satellite Satellite -651 821 192 1 770 22 56 0 0 chrUextra 24321522 24321558 -4683098 + AT_rich Low_complexity Low_complexity 1 36 0 1 770 4539 2 2 0 chrUextra 24321630 24322151 -4682505 - LSU-rRNA_Dme rRNA rRNA 0 3900 3379 1 770 2474 158 30 3 chrUextra 24322290 24322891 -4681765 + STALKER4_I LTR Gypsy 1368 2022 -4508 1 770 681 113 0 0 chrUextra 24322993 24323108 -4681548 - ARS406_DM Unknown Unknown -238 115 1 1 770 2646 179 10 10 chrUextra 24323015 24323635 -4681021 + SAR_DM Satellite Satellite 195 814 -658 1 770 231 134 176 15 chrUextra 24323736 24323804 -4680852 - Gypsy12_LTR LTR Gypsy -802 1534 1456 1 770 1216 182 135 25 chrUextra 24323807 24324208 -4680448 - Gypsy12_LTR LTR Gypsy -661 1675 1231 1 770 1204 307 14 16 chrUextra 24324482 24325054 -4679602 - MICROPIA_I LTR Gypsy -827 3649 3079 1 770 5531 0 0 3 chrUextra 24325219 24325861 -4678795 - ROO_I LTR Pao -587 7669 7030 1 770 27 29 0 0 chrUextra 24326320 24326354 -4678302 + AT_rich Low_complexity Low_complexity 1 34 0 1 770 394 22 0 0 chrUextra 24326557 24326603 -4678053 + Baggins1 LINE LOA 4727 4772 -681 1 770 5427 14 0 0 chrUextra 24326703 24327345 -4677311 - R1_DM LINE R1 -2945 2411 1770 1 770 3031 165 8 6 chrUextra 24327451 24328086 -4676570 - SAR_DM Satellite Satellite -425 1047 412 1 770 5102 26 28 2 chrUextra 24328187 24328829 -4675827 + R1_DM LINE R1 2061 2719 -2637 1 770 345 188 0 0 chrUextra 24330228 24330313 -4674343 + (CTATT)n Simple_repeat Simple_repeat 5 89 0 1 770 2495 177 10 16 chrUextra 24330413 24331022 -4673634 - SAR_DM Satellite Satellite -673 799 195 1 770 772 95 0 8 chrUextra 24330928 24331055 -4673601 + ARS406_DM Unknown Unknown 1 126 -227 1 770 559 28 14 0 chrUextra 24331155 24331227 -4673429 - LSU-rRNA_Dme rRNA rRNA -1188 2712 2640 1 770 4947 2 0 0 chrUextra 24331225 24331793 -4672863 - R1_DM LINE R1 0 5356 4789 1 770 34 24 0 0 chrUextra 24332382 24332423 -4672233 + AT_rich Low_complexity Low_complexity 1 41 0 1 770 3033 158 9 11 chrUextra 24332639 24333280 -4671376 - SAR_DM Satellite Satellite -457 1015 376 1 770 3583 102 1 4 chrUextra 24333394 24334023 -4670633 - BATUMI_I LTR Pao -1063 6851 5982 1 770 4885 47 3 8 chrUextra 24334865 24335507 -4669149 - CIRCE LINE Composite -3677 2679 2041 1 770 4446 23 34 0 chrUextra 24336433 24336991 -4667665 + FW_DM LINE Jockey 3120 3696 -996 1 770 5232 7 0 0 chrUextra 24337091 24337702 -4666954 + R1_DM LINE R1 4746 5356 0 1 770 270 30 0 0 chrUextra 24337700 24337733 -4666923 + LSU-rRNA_Dme rRNA rRNA 2640 2672 -1228 1 770 47 0 0 0 chrUextra 24338138 24338185 -4666471 + AT_rich Low_complexity Low_complexity 1 47 0 1 770 5449 6 0 0 chrUextra 24338575 24339217 -4665439 - DOC2_DM LINE Jockey -1268 3525 2884 1 770 353 180 10 29 chrUextra 24339317 24339420 -4665236 + XDMR_DM Unknown Unknown 260 360 0 1 770 2521 169 14 32 chrUextra 24339334 24339958 -4664698 - SAR_DM Satellite Satellite -353 1119 507 1 770 5227 6 2 19 chrUextra 24340066 24340701 -4663955 + QUASIMODO_I LTR Gypsy 101 724 -5336 1 770 2865 52 143 5 chrUextra 24340801 24341443 -4663213 + R1_DM LINE R1 634 1364 -3992 1 770 2834 42 155 0 chrUextra 24341543 24342000 -4662656 - PROTOP DNA P -3470 1010 483 1 770 945 17 8 0 chrUextra 24341998 24342117 -4662539 - PROTOP DNA P -4163 317 198 1 770 46 0 0 0 chrUextra 24342133 24342179 -4662477 + AT_rich Low_complexity Low_complexity 1 46 0 1 770 474 31 0 0 chrUextra 24342285 24342350 -4662306 - TART LINE telomeric -11636 2841 2777 1 770 2974 107 23 61 chrUextra 24342357 24342927 -4661729 - TART LINE telomeric -11115 3362 2815 1 770 641 116 0 9 chrUextra 24343027 24343140 -4661516 - ARS406_DM Unknown Unknown -241 112 1 1 770 2625 175 21 11 chrUextra 24343046 24343669 -4660987 + SAR_DM Satellite Satellite 195 823 -649 1 770 3145 0 0 61 chrUextra 24343769 24344177 -4660479 - LSU-rRNA_Dme rRNA rRNA -3517 383 1 1 770 21 95 0 0 chrUextra 24344189 24344252 -4660404 + AT_rich Low_complexity Low_complexity 1 63 0 1 770 2558 186 8 8 chrUextra 24344511 24345119 -4659537 - SAR_DM Satellite Satellite -673 799 192 1 770 815 92 0 0 chrUextra 24345023 24345153 -4659503 + ARS406_DM Unknown Unknown 1 130 -223 1 770 805 0 0 0 chrUextra 24345253 24345346 -4659310 + SSU-rRNA_Dme rRNA rRNA 1903 1995 0 1 770 21 89 0 0 chrUextra 24345365 24345421 -4659235 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 4484 29 3 75 chrUextra 24345995 24346636 -4658020 + Gypsy12_LTR LTR Gypsy 271 865 -1471 1 770 5203 26 5 0 chrUextra 24346737 24347379 -4657277 + R1_DM LINE R1 1471 2115 -3241 1 770 2653 193 6 8 chrUextra 24347479 24348121 -4656535 - SAR_DM Satellite Satellite -627 845 205 1 770 2586 183 13 11 chrUextra 24348225 24348845 -4655811 + SAR_DM Satellite Satellite 456 1076 -396 1 770 1429 78 5 31 chrUextra 24348963 24349187 -4655469 - BATUMI_I LTR Pao -7745 218 1 1 770 1288 13 0 19 chrUextra 24349187 24349346 -4655310 - BATUMI_I LTR Pao -679 7284 7129 1 770 2101 15 0 0 chrUextra 24349342 24349605 -4655051 + QUASIMODO_I LTR Gypsy 4969 5231 -829 1 770 2768 180 8 11 chrUextra 24349705 24350347 -4654309 + SAR_DM Satellite Satellite 208 847 -625 1 770 2395 92 14 28 chrUextra 24350451 24351087 -4653569 + DMSAT6 Satellite Satellite 1 627 0 1 770 796 83 0 0 chrUextra 24351189 24351309 -4653347 - ARS406_DM Unknown Unknown -233 120 1 1 770 2583 178 10 11 chrUextra 24351213 24351831 -4652825 + SAR_DM Satellite Satellite 192 808 -664 1 770 872 89 0 0 chrUextra 24351933 24352068 -4652588 - ARS406_DM Unknown Unknown -218 135 1 1 770 2514 185 7 8 chrUextra 24351972 24352572 -4652084 + SAR_DM Satellite Satellite 192 790 -682 1 770 5317 2 2 0 chrUextra 24352673 24353315 -4651341 - ROO_I LTR Pao -2950 5306 4664 1 770 5469 3 2 0 chrUextra 24353415 24354057 -4650599 - TART LINE telomeric -11084 3393 2751 1 770 5353 2 2 2 chrUextra 24354160 24354799 -4649857 + R1_DM LINE R1 717 1355 -4001 1 770 766 0 34 34 chrUextra 24354899 24355018 -4649638 + NTS_DM Other Other 122 240 0 1 770 1861 0 17 13 chrUextra 24355018 24355257 -4649399 + NTS_DM Other Other 1 240 0 1 770 1861 0 17 13 chrUextra 24355257 24355496 -4649160 + NTS_DM Other Other 1 240 0 1 770 354 0 0 22 chrUextra 24355496 24355541 -4649115 + NTS_DM Other Other 1 44 -196 1 770 2881 166 17 8 chrUextra 24355644 24356280 -4648376 - SAR_DM Satellite Satellite -549 923 282 1 770 1091 139 64 5 chrUextra 24356611 24356814 -4647842 + DNAREP1_DM LINE Penelope 22 236 -358 1 770 25 51 0 0 chrUextra 24356834 24356873 -4647783 + AT_rich Low_complexity Low_complexity 1 39 0 1 770 5356 2 26 0 chrUextra 24357125 24357767 -4646889 - STALKER4_I LTR Gypsy -2589 3941 3283 1 770 2955 164 11 9 chrUextra 24357867 24358509 -4646147 - SAR_DM Satellite Satellite -457 1015 373 1 770 2027 165 17 9 chrUextra 24359354 24359993 -4644663 + SAR_DM Satellite Satellite 1 643 -677 1 770 4843 9 11 19 chrUextra 24360093 24360735 -4643921 + STALKER4_I LTR Gypsy 5704 6340 -190 1 770 5057 20 5 0 chrUextra 24360835 24361477 -4643179 + QUASIMODO_I LTR Gypsy 878 1522 -4538 1 770 2290 84 8 43 chrUextra 24361577 24362218 -4642438 + DMSAT6 Satellite Satellite 1 618 -88 1 770 5594 0 0 2 chrUextra 24362319 24362961 -4641695 + LSU-rRNA_Dme rRNA rRNA 2679 3319 -581 1 770 5206 22 2 3 chrUextra 24363805 24364445 -4640211 + R1_DM LINE R1 1599 2237 -3119 1 770 5495 0 2 5 chrUextra 24364545 24365187 -4639469 - SSU-rRNA_Dme rRNA rRNA -514 1481 842 1 770 1056 8 0 0 chrUextra 24365287 24365415 -4639241 + MAX_I LTR Pao 7787 7914 0 1 770 2765 6 0 0 chrUextra 24365415 24365736 -4638920 + MAX_LTR LTR Pao 1 321 0 1 770 378 247 0 0 chrUextra 24365741 24365919 -4638737 + (CTATT)n Simple_repeat Simple_repeat 2 179 0 1 770 4883 22 83 0 chrUextra 24366029 24366666 -4637990 + ROO_I LTR Pao 1016 1705 -6551 1 770 21 89 0 0 chrUextra 24366931 24366987 -4637669 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 3541 2 2 0 chrUextra 24367006 24367413 -4637243 - SSU-rRNA_Dme rRNA rRNA 0 1995 1588 1 770 4773 58 2 6 chrUextra 24367513 24368155 -4636501 + BATUMI_I LTR Pao 3341 3979 -3984 1 770 5523 2 0 0 chrUextra 24368255 24368897 -4635759 + DOC LINE Jockey 2420 3061 -1664 1 770 23 68 0 0 chrUextra 24369864 24369908 -4634748 + AT_rich Low_complexity Low_complexity 1 44 0 1 770 26 30 0 0 chrUextra 24369954 24369987 -4634669 + AT_rich Low_complexity Low_complexity 1 33 0 1 770 28 48 0 0 chrUextra 24370506 24370548 -4634108 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 488 119 36 0 chrUextra 24370821 24370905 -4633751 - NTS_DM Other Other -150 90 4 1 770 687 10 0 38 chrUextra 24371015 24371121 -4633535 - NTS_DM Other Other -78 162 61 1 770 323 291 39 8 chrUextra 24371245 24371373 -4633283 - Copia2_I LTR Copia -3464 698 567 1 770 3043 44 3 0 chrUextra 24372014 24372398 -4632258 - DIVER2_LTR LTR Pao 0 385 1 1 770 1584 29 5 5 chrUextra 24372398 24372603 -4632053 - DIVER2_I LTR Pao 0 4147 3943 1 770 28 48 0 0 chrUextra 24372735 24372777 -4631879 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 488 119 36 0 chrUextra 24373050 24373134 -4631522 - NTS_DM Other Other -150 90 4 1 770 680 10 0 30 chrUextra 24373244 24373344 -4631312 - NTS_DM Other Other -78 162 66 1 770 2984 166 9 9 chrUextra 24374185 24374824 -4629832 + SAR_DM Satellite Satellite 404 1042 -430 1 770 5261 17 0 3 chrUextra 24374926 24375566 -4629090 - DMRT1A LINE R1 -4215 968 331 1 770 3796 37 2 2 chrUextra 24375667 24376151 -4628505 + R1_DM LINE R1 907 1390 -3966 1 770 1031 32 6 0 chrUextra 24376152 24376308 -4628348 - FW_DM LINE Jockey -1 4691 4535 1 770 476 18 0 0 chrUextra 24376408 24376464 -4628192 - NTS_DM Other Other -184 56 1 1 770 1723 25 17 17 chrUextra 24376464 24376704 -4627952 - NTS_DM Other Other 0 240 1 1 770 1704 21 17 21 chrUextra 24376704 24376945 -4627711 - NTS_DM Other Other 0 240 1 1 770 552 31 39 58 chrUextra 24376945 24377049 -4627607 - NTS_DM Other Other 0 240 139 1 770 5398 11 0 0 chrUextra 24377149 24377790 -4626866 + DMRT1B LINE R1 2040 2680 -2503 1 770 2431 151 41 0 chrUextra 24377892 24378328 -4626328 + FW_DM LINE Jockey 2369 2822 -1870 1 770 831 129 0 0 chrUextra 24378320 24378460 -4626196 + FW_DM LINE Jockey 3166 3305 -1387 1 770 552 42 0 0 chrUextra 24378460 24378531 -4626125 + (AATAG)n Simple_repeat Simple_repeat 4 74 0 1 770 3377 72 49 24 chrUextra 24378631 24379272 -4625384 + PROTOP_A DNA P 532 1134 -19 1 96 5280 25 2 0 chrUextra 24379372 24380013 -4624643 - R1_DM LINE R1 -419 4937 4296 1 771 1524 59 0 2 chrUextra 24380113 24380608 -4624048 + (TTCTC)n Simple_repeat Simple_repeat 1 494 0 1 771 915 56 0 0 chrUextra 24380617 24380743 -4623913 + (GAGAA)n Simple_repeat Simple_repeat 1 126 0 1 771 5451 0 0 2 chrUextra 24380854 24381495 -4623161 + LSU-rRNA_Dme rRNA rRNA 477 1116 -2784 1 771 2594 185 32 6 chrUextra 24381595 24382226 -4622430 - SAR_DM Satellite Satellite -450 1022 376 1 771 2767 177 8 11 chrUextra 24382336 24382971 -4621685 - SAR_DM Satellite Satellite -645 827 195 1 771 5610 0 0 2 chrUextra 24383077 24383718 -4620938 - SSU-rRNA_Dme rRNA rRNA -1114 881 242 1 771 2905 164 9 11 chrUextra 24383818 24384459 -4620197 + SAR_DM Satellite Satellite 333 972 -500 1 771 1763 39 172 0 chrUextra 24384884 24385139 -4619517 + PROTOP DNA P 1 298 -4182 1 771 403 44 44 0 chrUextra 24385126 24385194 -4619462 + PROTOP DNA P 522 592 -3888 1 771 5244 27 0 3 chrUextra 24385302 24385941 -4618715 - MAX_I LTR Pao -3713 4201 3565 1 771 5445 2 3 3 chrUextra 24386041 24386682 -4617974 - LSU-rRNA_Dme rRNA rRNA -2477 1423 783 1 771 4975 5 2 39 chrUextra 24386782 24387423 -4617233 + LSU-rRNA_Dme rRNA rRNA 32 648 -3252 1 771 2532 98 23 9 chrUextra 24387523 24388164 -4616492 + DMSAT6 Satellite Satellite 1 649 -267 1 771 5452 16 0 0 chrUextra 24388264 24388905 -4615751 - LSU-rRNA_Dme rRNA rRNA -1460 2440 1800 1 771 1620 0 0 0 chrUextra 24389005 24389221 -4615435 + (CACAA)n Simple_repeat Simple_repeat 1 216 0 1 771 1859 43 8 45 chrUextra 24389331 24389597 -4615059 - BLOOD_LTR LTR Gypsy -143 256 1 1 771 346 21 0 20 chrUextra 24389597 24389646 -4615010 - BLOOD_I LTR Gypsy 0 6613 6566 1 771 5459 2 3 3 chrUextra 24389746 24390387 -4614269 + LSU-rRNA_Dme rRNA rRNA 752 1392 -2508 1 771 5222 33 0 0 chrUextra 24390487 24391128 -4613528 + R1_DM LINE R1 4184 4824 -532 1 771 5373 2 2 5 chrUextra 24391228 24391869 -4612787 + R1_DM LINE R1 3260 3898 -1458 1 771 1740 0 14 14 chrUextra 24391969 24392190 -4612466 - NTS_DM Other Other -19 221 1 1 771 1861 0 17 13 chrUextra 24392190 24392429 -4612227 - NTS_DM Other Other 0 240 1 1 771 1280 6 22 17 chrUextra 24392429 24392610 -4612046 - NTS_DM Other Other 0 240 59 1 771 2720 168 18 11 chrUextra 24392710 24393338 -4611318 - SAR_DM Satellite Satellite -515 957 326 1 771 2623 191 9 11 chrUextra 24393451 24394090 -4610566 + SAR_DM Satellite Satellite 419 1056 -416 1 771 3040 95 77 42 chrUextra 24394196 24394833 -4609823 + STALKER4_I LTR Gypsy 681 1339 -5191 1 771 2496 74 11 24 chrUextra 24394933 24395574 -4609082 - DMSAT6 Satellite Satellite -67 632 1 1 771 4944 38 3 2 chrUextra 24395674 24396315 -4608341 + R1_DM LINE R1 698 1339 -4017 1 771 1521 178 39 12 chrUextra 24396415 24396745 -4607911 - STALKER4_I LTR Gypsy -5957 573 235 1 771 27 0 0 0 chrUextra 24396773 24396800 -4607856 + AT_rich Low_complexity Low_complexity 1 27 0 1 771 849 117 3 40 chrUextra 24396886 24397056 -4607600 - STALKER4_LTR LTR Gypsy -3 399 249 1 771 31 26 0 0 chrUextra 24397699 24397737 -4606919 + AT_rich Low_complexity Low_complexity 1 38 0 1 771 1153 26 117 0 chrUextra 24398383 24398537 -4606119 + PROTOP_B DNA P 1 172 -981 1 771 488 119 36 0 chrUextra 24399524 24399608 -4605048 + NTS_DM Other Other 4 90 -150 1 771 28 48 0 0 chrUextra 24399881 24399923 -4604733 + AT_rich Low_complexity Low_complexity 1 42 0 1 771 1953 20 0 4 chrUextra 24400120 24400369 -4604287 - PROTOP DNA P -431 4049 3802 1 771 2730 43 43 0 chrUextra 24400364 24400761 -4603895 - PROTOP DNA P -3657 823 410 1 771 5343 11 16 0 chrUextra 24400861 24401501 -4603155 - R1_DM LINE R1 -4630 726 77 1 771 1242 19 0 0 chrUextra 24401602 24401761 -4602895 - PROTOP DNA P -520 3960 3802 1 771 2977 50 38 0 chrUextra 24401756 24402199 -4602457 - PROTOP DNA P -3657 823 364 1 771 389 0 0 0 chrUextra 24402191 24402239 -4602417 - PROTOP DNA P -4197 283 236 1 771 5028 10 0 0 chrUextra 24402343 24402946 -4601710 + IDEFIX_I LTR Gypsy 2083 2685 -2943 1 771 273 51 0 0 chrUextra 24402945 24402984 -4601672 + IDEFIX_I LTR Gypsy 2818 2856 -2772 1 771 2916 167 17 11 chrUextra 24403830 24404466 -4600190 - SAR_DM Satellite Satellite -577 895 256 1 771 5099 2 2 0 chrUextra 24404566 24405153 -4599503 + LSU-rRNA_Dme rRNA rRNA 2045 2632 -1268 1 771 455 0 0 0 chrUextra 24405153 24405207 -4599449 + R1_DM LINE R1 1 54 -5302 1 771 5272 23 2 0 chrUextra 24405307 24405948 -4598708 + R1_DM LINE R1 2114 2755 -2601 1 771 197 182 18 0 chrUextra 24406052 24406107 -4598549 + (CATAA)n Simple_repeat Simple_repeat 2 57 0 1 771 5213 2 0 5 chrUextra 24406789 24407395 -4597261 - LSU-rRNA_Dme rRNA rRNA -1510 2390 1788 1 771 1524 11 0 0 chrUextra 24407530 24407718 -4596938 + NTS_DM Other Other 11 198 -42 1 771 3705 14 0 0 chrUextra 24407727 24408171 -4596485 - G2_DM LINE Jockey 0 3102 2659 1 771 4783 35 2 16 chrUextra 24408276 24408912 -4595744 - BATUMI_I LTR Pao -4666 3297 2671 1 771 2868 174 9 8 chrUextra 24409017 24409653 -4595003 + SAR_DM Satellite Satellite 282 918 -554 1 771 558 144 0 0 chrUextra 24410496 24410600 -4594056 - ARS406_DM Unknown Unknown -249 104 1 1 771 2717 174 18 8 chrUextra 24410507 24411134 -4593522 + SAR_DM Satellite Satellite 195 827 -645 1 771 1976 187 59 27 chrUextra 24411235 24411873 -4592783 - SAR_DM Satellite Satellite -515 657 1 1 771 1136 72 6 0 chrUextra 24412723 24412889 -4591767 - PROTOP_B DNA P -793 360 194 1 771 537 151 92 8 chrUextra 24412886 24413006 -4591650 - PROTOP DNA P -4350 130 1 1 771 1045 135 69 171 chrUextra 24413006 24413306 -4591350 - HOBO DNA hAT -2704 312 44 1 771 2584 181 11 13 chrUextra 24413459 24414093 -4590563 - SAR_DM Satellite Satellite -645 827 195 1 771 2499 179 15 15 chrUextra 24414222 24414840 -4589816 - SAR_DM Satellite Satellite -396 1076 459 1 771 5420 2 2 2 chrUextra 24414940 24415581 -4589075 + R1_DM LINE R1 839 1479 -3877 1 771 417 66 0 0 chrUextra 24415684 24415745 -4588911 + (TTCTC)n Simple_repeat Simple_repeat 2 62 0 1 771 998 149 20 10 chrUextra 24416423 24416626 -4588030 + HOBO DNA hAT 2812 3016 0 1 771 734 181 19 19 chrUextra 24416633 24416791 -4587865 - HETRP_DM Satellite Satellite -197 1675 1518 1 771 483 205 79 0 chrUextra 24416936 24417063 -4587593 - HETRP_DM Satellite Satellite -203 1669 1533 1 771 5553 0 2 2 chrUextra 24417163 24417804 -4586852 + LSU-rRNA_Dme rRNA rRNA 2431 3071 -829 1 771 5119 30 3 2 chrUextra 24417904 24418545 -4586111 - R1_DM LINE R1 -513 4843 4202 1 771 2431 179 16 29 chrUextra 24418646 24419278 -4585378 + SAR_DM Satellite Satellite 496 1119 -353 1 771 235 222 0 0 chrUextra 24419223 24419286 -4585370 - XDMR Unknown Unknown 0 361 299 1 771 1252 18 0 6 chrUextra 24419472 24419637 -4585019 - NTS_DM Other Other -39 201 38 1 771 870 9 0 27 chrUextra 24419637 24419749 -4584907 - NTS_DM Other Other -107 133 25 1 771 22 56 0 0 chrUextra 24419775 24419811 -4584845 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 255 125 0 0 chrUextra 24419824 24419864 -4584792 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24419907 24419947 -4584709 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 2748 175 8 11 chrUextra 24420144 24420768 -4583888 + SAR_DM Satellite Satellite 406 1027 -445 1 771 2245 65 0 75 chrUextra 24420874 24421221 -4583435 + CIRCE LINE Composite 972 1292 -5064 1 771 543 335 22 22 chrUextra 24421133 24421444 -4583212 + Gypsy12_I LTR Gypsy 3059 3369 -2177 1 771 1452 25 0 95 chrUextra 24421287 24421509 -4583147 + CIRCE LINE Composite 1305 1505 -4851 1 771 3031 165 9 9 chrUextra 24422350 24422991 -4581665 - SAR_DM Satellite Satellite -450 1022 382 1 771 2928 0 3 0 chrUextra 24423091 24423429 -4581227 + LSU-rRNA_Dme rRNA rRNA 3562 3900 0 1 771 22 56 0 0 chrUextra 24423501 24423537 -4581119 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 246 150 0 0 chrUextra 24423542 24423582 -4581074 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 246 150 0 0 chrUextra 24423634 24423674 -4580982 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 1770 38 77 0 chrUextra 24423832 24424067 -4580589 - R1_DM LINE R1 -2827 2529 2277 1 771 436 0 0 0 chrUextra 24424067 24424117 -4580539 + CIRCE LINE Composite 4931 4980 -1376 1 771 368 170 40 10 chrUextra 24424585 24424686 -4579970 + SAR_DM Satellite Satellite 326 429 -1043 1 771 1070 173 31 10 chrUextra 24424697 24425201 -4579455 + SAR_DM Satellite Satellite 1 514 -680 1 771 2914 161 14 9 chrUextra 24425314 24425952 -4578704 + SAR_DM Satellite Satellite 332 972 -500 1 771 2946 171 9 6 chrUextra 24426055 24426695 -4577961 - SAR_DM Satellite Satellite -549 923 282 1 771 2480 193 6 20 chrUextra 24426799 24427435 -4577221 + SAR_DM Satellite Satellite 481 1107 -365 1 771 5390 3 8 5 chrUextra 24427537 24428178 -4576478 + MAX_I LTR Pao 1263 1905 -6009 1 771 362 0 0 0 chrUextra 24428278 24428319 -4576337 - NTS_DM Other Other -162 78 38 1 771 840 9 0 35 chrUextra 24428319 24428432 -4576224 - NTS_DM Other Other -107 133 25 1 771 22 56 0 0 chrUextra 24428458 24428494 -4576162 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 255 125 0 0 chrUextra 24428507 24428547 -4576109 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24428590 24428630 -4576026 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24428682 24428722 -4575934 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24428774 24428814 -4575842 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 22 56 0 0 chrUextra 24428819 24428855 -4575801 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 34 24 0 0 chrUextra 24429259 24429300 -4575356 + AT_rich Low_complexity Low_complexity 1 41 0 1 771 240 68 136 0 chrUextra 24429760 24429804 -4574852 + ARS406_DM Unknown Unknown 140 189 -164 1 771 2571 187 42 24 chrUextra 24429766 24430396 -4574260 - SAR_DM Satellite Satellite -615 641 1 1 771 575 158 350 46 chrUextra 24430605 24430845 -4573811 - ROVER-LTR_DM LTR Gypsy 0 367 55 1 771 2201 50 0 0 chrUextra 24430841 24431142 -4573514 - I_DM LINE I -5045 1186 886 1 771 241 30 30 0 chrUextra 24431269 24431302 -4573354 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 1 771 5127 2 0 0 chrUextra 24431297 24431883 -4572773 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2068 1 771 3032 25 77 2 chrUextra 24431983 24432624 -4572032 - R1_DM LINE R1 -1295 4061 3373 1 771 2135 8 0 0 chrUextra 24432724 24432970 -4571686 - DMLTR5 LTR Gypsy -20 246 1 1 771 3404 0 2 0 chrUextra 24432970 24433365 -4571291 + SSU-rRNA_Dme rRNA rRNA 700 1095 -900 1 771 1273 16 21 21 chrUextra 24433465 24433652 -4571004 + NTS_DM Other Other 54 240 0 1 771 1744 21 17 17 chrUextra 24433652 24433892 -4570764 + NTS_DM Other Other 1 240 0 1 771 1627 19 14 5 chrUextra 24433892 24434105 -4570551 + NTS_DM Other Other 1 215 -25 1 771 450 0 0 0 chrUextra 24434206 24434256 -4570400 + (CAAGA)n Simple_repeat Simple_repeat 3 52 0 1 771 751 32 0 0 chrUextra 24434947 24435040 -4569616 + Invader2_I LTR Gypsy 548 640 -3952 1 771 603 24 0 24 chrUextra 24435037 24435122 -4569534 + Invader2_I LTR Gypsy 1173 1255 -3337 1 771 794 112 56 6 chrUextra 24435124 24435304 -4569352 + HMSBEAGLE_I LTR Gypsy 522 710 -5819 1 771 1140 84 5 38 chrUextra 24435402 24435588 -4569068 + HMSBEAGLE_I LTR Gypsy 1123 1302 -5227 1 771 1778 13 21 13 chrUextra 24435696 24435934 -4568722 + NTS_DM Other Other 1 240 0 1 771 1850 4 17 13 chrUextra 24435934 24436173 -4568483 + NTS_DM Other Other 1 240 0 1 771 1276 13 0 0 chrUextra 24436173 24436329 -4568327 + NTS_DM Other Other 1 156 -84 1 771 5503 3 0 0 chrUextra 24436429 24437070 -4567586 + Invader3_I LTR Gypsy 1925 2565 -2323 1 771 485 73 0 0 chrUextra 24437178 24437246 -4567410 - R1_DM LINE R1 -5288 68 1 1 771 4448 19 2 0 chrUextra 24437279 24437811 -4566845 - R1_DM LINE R1 0 5356 4824 1 771 5400 6 6 2 chrUextra 24437911 24438552 -4566104 + PROTOP DNA P 2396 3039 -1441 1 771 34 24 0 0 chrUextra 24438769 24438810 -4565846 + AT_rich Low_complexity Low_complexity 1 41 0 1 771 4511 57 14 5 chrUextra 24439400 24440034 -4564622 + TART LINE telomeric 295 934 -13543 1 771 5502 0 2 0 chrUextra 24440134 24440775 -4563881 + R1_DM LINE R1 1566 2207 -3149 1 771 1156 7 0 0 chrUextra 24440935 24441070 -4563586 + 5S_DM RNA RNA 1 135 0 1 771 1157 7 0 0 chrUextra 24441311 24441446 -4563210 + 5S_DM RNA RNA 1 135 0 1 771 467 14 29 0 chrUextra 24441616 24441686 -4562970 + NTS_DM Other Other 62 133 -107 1 771 817 0 0 0 chrUextra 24441686 24441782 -4562874 + NTS_DM Other Other 38 133 -107 1 771 1408 20 20 20 chrUextra 24441782 24441985 -4562671 + NTS_DM Other Other 38 240 0 1 771 1713 25 17 17 chrUextra 24441985 24442225 -4562431 + NTS_DM Other Other 1 240 0 1 771 262 31 0 0 chrUextra 24442225 24442257 -4562399 + NTS_DM Other Other 1 32 -208 1 771 246 150 0 0 chrUextra 24442434 24442474 -4562182 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 246 150 0 0 chrUextra 24442526 24442566 -4562090 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 255 125 0 0 chrUextra 24442609 24442649 -4562007 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 870 9 0 27 chrUextra 24442724 24442836 -4561820 + NTS_DM Other Other 25 133 -107 1 771 1202 19 6 6 chrUextra 24442836 24442998 -4561658 + NTS_DM Other Other 38 199 -41 1 771 239 54 0 51 chrUextra 24443098 24443128 -4561528 - DMTOM1_LTR LTR Gypsy -34 376 349 1 771 552 148 40 16 chrUextra 24443128 24443252 -4561404 - DMTOM1_LTR LTR Gypsy 0 410 284 1 771 235 190 17 17 chrUextra 24443269 24443328 -4561328 - DM176_LTR LTR Gypsy -141 366 308 1 771 781 126 0 83 chrUextra 24443562 24443718 -4560938 - DM176_I LTR Gypsy 0 6420 6278 1 771 1209 96 0 0 chrUextra 24444588 24444766 -4559890 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 771 1802 182 57 25 chrUextra 24445321 24445962 -4558694 + SAR_DM Satellite Satellite 1 660 -208 1 771 5496 0 0 2 chrUextra 24446803 24447444 -4557212 - R1_DM LINE R1 -3366 1990 1351 1 771 4820 4 4 0 chrUextra 24447544 24448106 -4556550 - DM1731_I LTR Copia -3412 564 1 1 771 660 0 0 0 chrUextra 24448109 24448185 -4556471 - DM1731_LTR LTR Copia -252 84 9 1 771 2032 163 8 9 chrUextra 24448288 24448926 -4555730 + SAR_DM Satellite Satellite 1 636 -921 1 771 320 105 18 0 chrUextra 24449026 24449083 -4555573 - ARS406_DM Unknown Unknown -295 58 1 1 771 2967 174 5 3 chrUextra 24449043 24449667 -4554989 + SAR_DM Satellite Satellite 246 870 -602 1 771 3627 37 153 3 chrUextra 24449767 24450408 -4554248 + R1_DM LINE R1 1000 1736 -3620 1 771 28 48 0 0 chrUextra 24450529 24450571 -4554085 + AT_rich Low_complexity Low_complexity 1 42 0 1 771 488 119 36 0 chrUextra 24450845 24450929 -4553727 - NTS_DM Other Other -150 90 4 1 771 771 9 0 27 chrUextra 24451039 24451149 -4553507 - NTS_DM Other Other -78 162 56 1 771 495 46 0 0 chrUextra 24451251 24451316 -4553340 - R1_DM LINE R1 -5291 65 1 1 771 4255 31 2 0 chrUextra 24451349 24451872 -4552784 - R1_DM LINE R1 0 5356 4833 1 771 1532 202 49 75 chrUextra 24452731 24453372 -4551284 + TAHRE LINE telomeric 6944 7501 -2962 1 771 3795 8 150 0 chrUextra 24454212 24454844 -4549812 - Gypsy4_I LTR Gypsy -486 5802 5076 1 771 2528 89 20 3 chrUextra 24454952 24455592 -4549064 + DMSAT6 Satellite Satellite 1 651 -108 1 771 1605 66 0 0 chrUextra 24455692 24455935 -4548721 + S_DM DNA Tc1 1494 1736 0 1 771 507 81 50 0 chrUextra 24455935 24456034 -4548622 - PROTOP_B DNA P -399 754 651 1 771 414 84 0 35 chrUextra 24456040 24456126 -4548530 + PROTOP_B DNA P 647 729 -424 1 771 716 49 266 0 chrUextra 24456138 24456329 -4548327 - PROTOP_B DNA P -518 635 394 1 771 1910 90 9 9 chrUextra 24456432 24456769 -4547887 + S_DM DNA Tc1 84 420 -1316 1 771 1466 74 0 0 chrUextra 24456768 24456998 -4547658 + S_DM DNA Tc1 1507 1736 0 1 771 549 73 12 0 chrUextra 24456998 24457072 -4547584 + CIRCE LINE Composite 4493 4567 -1789 1 771 4496 83 31 0 chrUextra 24457172 24457808 -4546848 - Gypsy12_I LTR Gypsy -269 5277 4622 1 771 5393 9 0 0 chrUextra 24457912 24458552 -4546104 + Gypsy4_I LTR Gypsy 4875 5514 -774 1 771 5139 17 34 3 chrUextra 24458652 24459292 -4545364 - R1_DM LINE R1 -1787 3569 2910 1 771 2329 98 19 38 chrUextra 24459392 24460032 -4544624 + DMSAT6 Satellite Satellite 1 628 -97 1 771 2689 178 11 9 chrUextra 24460132 24460761 -4543895 + SAR_DM Satellite Satellite 447 1076 -396 1 771 2655 165 19 18 chrUextra 24461612 24462241 -4542415 - SAR_DM Satellite Satellite -663 809 180 1 771 5434 3 0 5 chrUextra 24462354 24462992 -4541664 + G2_DM LINE Jockey 1105 1739 -1363 1 771 5376 0 3 0 chrUextra 24463092 24463732 -4540924 - ROO_I LTR Pao -4122 4134 3493 1 771 5575 3 0 0 chrUextra 24463832 24464472 -4540184 + MICROPIA_I LTR Gypsy 2332 2971 -1505 1 771 5110 23 0 2 chrUextra 24464572 24465212 -4539444 + STALKER4_I LTR Gypsy 2393 3031 -3499 1 771 280 143 18 0 chrUextra 24465312 24465368 -4539288 - ARS406_DM Unknown Unknown -296 57 1 1 771 2836 178 6 6 chrUextra 24465319 24465952 -4538704 + SAR_DM Satellite Satellite 237 869 -603 1 771 21 95 0 0 chrUextra 24466129 24466192 -4538464 + AT_rich Low_complexity Low_complexity 1 63 0 1 771 3781 2 2 51 chrUextra 24466204 24466692 -4537964 + LSU-rRNA_Dme rRNA rRNA 1 464 -3436 1 771 2437 0 0 0 chrUextra 24466792 24467073 -4537583 - STALKER4_LTR LTR Gypsy -121 281 1 1 771 2781 3 0 0 chrUextra 24467073 24467432 -4537224 - STALKER4_I LTR Gypsy 0 6530 6172 1 771 3620 76 75 12 chrUextra 24467532 24468172 -4536484 - Gypsy12_I LTR Gypsy -258 5288 4609 1 771 2425 28 0 0 chrUextra 24468272 24468560 -4536096 - Baggins1 LINE LOA -149 5304 5017 1 771 2944 26 0 0 chrUextra 24468564 24468912 -4535744 - Baggins1 LINE LOA -97 5356 5009 1 771 5423 5 0 5 chrUextra 24469012 24469652 -4535004 - G2_DM LINE Jockey -1423 1679 1043 1 771 2175 112 5 45 chrUextra 24469752 24470348 -4534308 + DMSAT6 Satellite Satellite 1 571 -69 1 771 4657 5 5 73 chrUextra 24471232 24471872 -4532784 - LSU-rRNA_Dme rRNA rRNA -2040 1860 1265 1 771 21 89 0 0 chrUextra 24472419 24472475 -4532181 + AT_rich Low_complexity Low_complexity 1 56 0 1 771 5452 2 3 0 chrUextra 24472712 24473352 -4531304 + ROO_I LTR Pao 4958 5599 -2657 1 771 5175 25 2 0 chrUextra 24473452 24474092 -4530564 + ROO_I LTR Pao 1930 2570 -5686 1 771 5468 3 0 2 chrUextra 24474192 24474832 -4529824 - R1_DM LINE R1 -879 4477 3839 1 771 4679 59 3 3 chrUextra 24475682 24476312 -4528344 + R1_DM LINE R1 1 630 -4726 1 771 5242 28 0 0 chrUextra 24476412 24477052 -4527604 - R1_DM LINE R1 -547 4809 4170 1 771 2543 182 8 21 chrUextra 24477152 24477774 -4526882 + SAR_DM Satellite Satellite 498 1111 -361 1 771 289 191 11 22 chrUextra 24477697 24477788 -4526868 - XDMR_DM Unknown Unknown 0 360 271 1 771 2810 169 17 12 chrUextra 24477892 24478532 -4526124 + SAR_DM Satellite Satellite 228 870 -602 1 771 2152 15 30 0 chrUextra 24478632 24478901 -4525755 - PROTOP_A DNA P -699 406 130 1 771 26 30 0 0 chrUextra 24479059 24479092 -4525564 + AT_rich Low_complexity Low_complexity 1 33 0 1 771 3735 22 0 0 chrUextra 24479372 24479826 -4524830 - PROTOP_A DNA P -651 454 1 1 771 699 109 75 71 chrUextra 24479826 24479977 -4524679 + TART LINE telomeric 3884 4029 -10448 1 771 4097 90 82 0 chrUextra 24480139 24480752 -4523904 + Gypsy_I LTR Gypsy 511 1173 -5334 1 771 5519 5 2 2 chrUextra 24480852 24481492 -4523164 - LSU-rRNA_Dme rRNA rRNA -268 3632 2993 1 771 3509 27 0 7 chrUextra 24481787 24482232 -4522424 + PROTOP_A DNA P 1 442 -663 1 771 1843 194 19 5 chrUextra 24483079 24483712 -4520944 - SAR_DM Satellite Satellite -651 641 1 1 771 1167 7 0 0 chrUextra 24483934 24484069 -4520587 + 5S_DM RNA RNA 1 135 0 1 771 1167 7 0 0 chrUextra 24484300 24484435 -4520221 + 5S_DM RNA RNA 1 135 0 1 771 2718 169 32 8 chrUextra 24484553 24485186 -4519470 - SAR_DM Satellite Satellite -645 827 180 1 771 3156 0 5 3 chrUextra 24485292 24485666 -4518990 + LSU-rRNA_Dme rRNA rRNA 1414 1788 -2112 1 771 1914 0 0 5 chrUextra 24485710 24485932 -4518724 + LSU-rRNA_Dme rRNA rRNA 1788 2008 -1892 1 771 3074 122 21 43 chrUextra 24486037 24486612 -4518044 + Gypsy12_LTR LTR Gypsy 1775 2336 0 1 771 409 34 0 33 chrUextra 24486612 24486672 -4517984 + Gypsy12_I LTR Gypsy 1 58 -5488 1 771 5149 27 2 0 chrUextra 24486772 24487411 -4517245 + R1_DM LINE R1 2490 3129 -2227 1 771 590 95 0 0 chrUextra 24487512 24487596 -4517060 - TAHRE LINE telomeric -8117 2346 2263 1 771 1813 66 7 39 chrUextra 24487594 24487876 -4516780 - HETA LINE telomeric -3915 2166 1894 1 771 1870 79 25 0 chrUextra 24487875 24488152 -4516504 - HETA LINE telomeric -4524 1557 1274 1 771 5192 20 6 2 chrUextra 24488254 24488892 -4515764 + R1_DM LINE R1 1498 2138 -3218 1 771 1138 165 4 8 chrUextra 24488994 24489232 -4515424 + SAR_DM Satellite Satellite 667 903 -569 1 771 1740 181 5 3 chrUextra 24489247 24489630 -4515026 + SAR_DM Satellite Satellite 496 879 -593 1 771 1161 0 0 0 chrUextra 24489732 24489870 -4514786 + QUASIMODO_LTR LTR Gypsy 521 658 0 1 771 3831 11 34 2 chrUextra 24489870 24490205 -4514451 + QUASIMODO_I LTR Gypsy 1 334 -5726 1 771 195 0 86 0 chrUextra 24490205 24490240 -4514416 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 1 771 3831 11 34 2 chrUextra 24490240 24490372 -4514284 + QUASIMODO_I LTR Gypsy 335 481 -5579 1 771 34 24 0 0 chrUextra 24490616 24490657 -4513999 + AT_rich Low_complexity Low_complexity 1 41 0 1 771 21 95 0 0 chrUextra 24490870 24490933 -4513723 + AT_rich Low_complexity Low_complexity 1 63 0 1 771 1450 0 0 0 chrUextra 24490945 24491112 -4513544 + LSU-rRNA_Dme rRNA rRNA 1 167 -3733 1 771 3505 79 64 28 chrUextra 24491213 24491852 -4512804 + STALKER4_I LTR Gypsy 773 1434 -5096 1 771 2370 176 30 13 chrUextra 24491955 24492592 -4512064 + SAR_DM Satellite Satellite 1 647 -396 1 771 5149 2 0 2 chrUextra 24492692 24493286 -4511370 + LSU-rRNA_Dme rRNA rRNA 2040 2632 -1268 1 771 392 0 0 0 chrUextra 24493286 24493332 -4511324 + R1_DM LINE R1 1 46 -5310 1 771 4735 39 3 2 chrUextra 24493433 24494072 -4510584 + ZAM_I LTR Gypsy 5370 6009 -1481 1 771 2803 176 7 5 chrUextra 24494189 24494800 -4509856 + SAR_DM Satellite Satellite 326 937 -535 1 771 2106 48 0 0 chrUextra 24494912 24495184 -4509472 + DM1731_LTR LTR Copia 65 336 0 1 771 3177 0 3 0 chrUextra 24495184 24495552 -4509104 + DM1731_I LTR Copia 1 369 -3607 1 771 2908 172 8 9 chrUextra 24495657 24496292 -4508364 - SAR_DM Satellite Satellite -425 1047 414 1 771 2941 166 11 9 chrUextra 24497132 24497770 -4506886 - SAR_DM Satellite Satellite -488 984 346 1 771 5241 0 3 3 chrUextra 24497872 24498512 -4506144 - MAX_I LTR Pao -6772 1142 503 1 771 368 23 0 0 chrUextra 24498612 24498656 -4506000 - NTS_DM Other Other -196 44 1 1 771 1756 17 17 17 chrUextra 24498656 24498896 -4505760 - NTS_DM Other Other 0 240 1 1 771 1737 21 17 17 chrUextra 24498896 24499136 -4505520 - NTS_DM Other Other 0 240 1 1 771 650 36 35 35 chrUextra 24499136 24499252 -4505404 - NTS_DM Other Other 0 240 125 1 771 4412 42 0 77 chrUextra 24499352 24499992 -4504664 + R1_DM LINE R1 1278 1868 -3488 1 771 32 0 0 0 chrUextra 24500330 24500362 -4504294 + AT_rich Low_complexity Low_complexity 1 32 0 1 771 2132 8 0 0 chrUextra 24500494 24500732 -4503924 + SSU-rRNA_Dme rRNA rRNA 1 238 -1757 1 771 3194 165 9 8 chrUextra 24500832 24501472 -4503184 + SAR_DM Satellite Satellite 376 1016 -456 1 771 5520 27 0 0 chrUextra 24501572 24502212 -4502444 + DIVER_I LTR Pao 1454 2093 -3550 1 771 5701 0 3 5 chrUextra 24502312 24502952 -4501704 - SSU-rRNA_Dme rRNA rRNA -593 1402 764 1 771 4411 102 36 6 chrUextra 24503052 24503692 -4500964 - Gypsy12_I LTR Gypsy -3436 2110 1452 1 771 5837 0 0 2 chrUextra 24503792 24504432 -4500224 + SSU-rRNA_Dme rRNA rRNA 392 1030 -965 1 771 5411 31 0 2 chrUextra 24504532 24505172 -4499484 - R1_DM LINE R1 -2448 2908 2270 1 771 5560 16 0 0 chrUextra 24505272 24505912 -4498744 + DMRT1B LINE R1 2697 3336 -1847 1 771 368 303 14 43 chrUextra 24506314 24506521 -4498135 - BLASTOPIA_I LTR Gypsy -740 3741 3541 1 771 2716 191 22 23 chrUextra 24506752 24507392 -4497264 - SAR_DM Satellite Satellite -1091 639 1 1 771 5579 2 0 2 chrUextra 24508232 24508872 -4495784 + ROO_I LTR Pao 3096 3734 -4522 1 771 3187 211 41 24 chrUextra 24508977 24510352 -4494304 - SAR_DM Satellite Satellite -478 1398 1 1 96 4440 6 0 2 chrUextra 24510452 24510962 -4493694 + DOC LINE Jockey 4215 4723 -2 1 772 235 0 0 0 chrUextra 24510962 24510988 -4493668 - ROO_I LTR Pao -4037 4219 4194 1 772 805 21 0 0 chrUextra 24510998 24511092 -4493564 + FW_DM LINE Jockey 1750 1843 -2849 1 772 2859 175 21 8 chrUextra 24511202 24511831 -4492825 + SAR_DM Satellite Satellite 195 831 -641 1 772 2864 175 29 8 chrUextra 24511932 24512554 -4492102 + SAR_DM Satellite Satellite 442 1076 -396 1 772 5622 2 0 2 chrUextra 24512696 24513312 -4491344 + SSU-rRNA_Dme rRNA rRNA 1 615 -1380 1 772 861 94 0 0 chrUextra 24513412 24513539 -4491117 - ARS406_DM Unknown Unknown -226 127 1 1 772 2674 179 10 11 chrUextra 24513443 24514052 -4490604 + SAR_DM Satellite Satellite 192 799 -673 1 772 2364 116 15 20 chrUextra 24514892 24515498 -4489158 - DMSAT6 Satellite Satellite -71 603 1 1 772 2576 175 6 6 chrUextra 24515634 24516272 -4488384 + SAR_DM Satellite Satellite 1 638 -416 1 772 633 129 17 0 chrUextra 24516372 24516488 -4488168 - ARS406_DM Unknown Unknown -235 118 1 1 772 2647 179 18 13 chrUextra 24516398 24517008 -4487648 + SAR_DM Satellite Satellite 198 810 -662 1 772 643 20 39 39 chrUextra 24517112 24517215 -4487441 + NTS_DM Other Other 138 240 0 1 772 1813 21 17 17 chrUextra 24517215 24517455 -4487201 + NTS_DM Other Other 1 240 0 1 772 1835 17 17 17 chrUextra 24517455 24517695 -4486961 + NTS_DM Other Other 1 240 0 1 772 478 18 18 0 chrUextra 24517695 24517752 -4486904 + NTS_DM Other Other 1 58 -182 1 772 3953 137 5 0 chrUextra 24517887 24518492 -4486164 - HMSBEAGLE_I LTR Gypsy -4075 2454 1847 1 772 2994 168 13 11 chrUextra 24518598 24519230 -4485426 - SAR_DM Satellite Satellite -514 958 326 1 772 3217 163 9 8 chrUextra 24519332 24519970 -4484686 - SAR_DM Satellite Satellite -457 1015 377 1 772 2986 170 11 11 chrUextra 24520073 24520709 -4483947 - SAR_DM Satellite Satellite -645 827 192 1 772 5319 27 5 0 chrUextra 24520812 24521451 -4483205 + IDEFIX_I LTR Gypsy 2221 2862 -2766 1 772 2855 181 25 8 chrUextra 24521553 24522192 -4482464 + SAR_DM Satellite Satellite 212 861 -611 1 772 441 0 0 0 chrUextra 24522292 24522342 -4482314 - R1_DM LINE R1 -5306 50 1 1 772 5114 3 0 5 chrUextra 24522359 24522932 -4481724 - LSU-rRNA_Dme rRNA rRNA -1237 2663 2094 1 772 2927 180 11 8 chrUextra 24523032 24523669 -4480987 - SAR_DM Satellite Satellite -488 984 346 1 772 684 0 0 0 chrUextra 24523772 24523848 -4480808 + (GAGAA)n Simple_repeat Simple_repeat 2 77 0 1 772 5630 0 3 0 chrUextra 24524512 24525152 -4479504 + ROO_I LTR Pao 921 1562 -6694 1 772 1422 95 13 4 chrUextra 24525252 24525485 -4479171 + S_DM DNA Tc1 186 420 -1316 1 772 1538 74 0 0 chrUextra 24525484 24525714 -4478942 + S_DM DNA Tc1 1507 1736 0 1 772 976 52 7 0 chrUextra 24525714 24525842 -4478814 + CIRCE LINE Composite 4493 4621 -1735 1 772 417 74 0 0 chrUextra 24525838 24525892 -4478764 + CIRCE LINE Composite 4838 4891 -1465 1 772 2488 100 16 27 chrUextra 24525992 24526632 -4478024 + DMSAT6 Satellite Satellite 1 633 -64 1 772 1497 26 0 26 chrUextra 24526732 24526926 -4477730 + R1_DM LINE R1 3898 4086 -1270 1 772 3760 29 5 0 chrUextra 24526924 24527372 -4477284 + R1_DM LINE R1 4559 5008 -348 1 772 335 114 31 20 chrUextra 24527473 24527571 -4477085 + MDG1_I LTR Gypsy 6433 6531 -65 1 772 360 82 0 103 chrUextra 24527603 24527711 -4476945 + MDG1_I LTR Gypsy 6530 6596 0 1 772 1515 37 0 0 chrUextra 24527726 24528112 -4476544 + (TAA)n Simple_repeat Simple_repeat 1 386 0 1 772 5807 2 2 0 chrUextra 24528212 24528852 -4475804 + LSU-rRNA_Dme rRNA rRNA 1972 2612 -1288 1 772 32 0 0 0 chrUextra 24529077 24529109 -4475547 + AT_rich Low_complexity Low_complexity 1 32 0 1 772 3154 3 0 3 chrUextra 24529241 24529592 -4475064 + SSU-rRNA_Dme rRNA rRNA 1 350 -1645 1 772 3127 163 13 9 chrUextra 24529695 24530331 -4474325 + SAR_DM Satellite Satellite 369 1006 -466 1 772 2982 171 8 7 chrUextra 24530452 24531059 -4473597 + SAR_DM Satellite Satellite 326 933 -539 1 772 5359 28 0 0 chrUextra 24531170 24531809 -4472847 + HETA LINE telomeric 2582 3220 -2861 1 772 2978 172 11 11 chrUextra 24531909 24532545 -4472111 - SAR_DM Satellite Satellite -570 902 267 1 772 3171 156 9 16 chrUextra 24532649 24533287 -4471369 + SAR_DM Satellite Satellite 400 1033 -439 1 772 340 70 0 0 chrUextra 24533387 24533430 -4471226 - IDEFIX_I LTR Gypsy -3920 1708 1666 1 772 33 0 0 0 chrUextra 24533861 24533894 -4470762 + AT_rich Low_complexity Low_complexity 1 33 0 1 772 854 10 0 10 chrUextra 24534126 24534227 -4470429 - 5S_DM RNA RNA -35 100 1 1 772 1222 7 0 0 chrUextra 24534454 24534589 -4470067 - 5S_DM RNA RNA 0 135 1 1 772 3298 153 11 9 chrUextra 24534865 24535503 -4469153 + SAR_DM Satellite Satellite 382 1020 -452 1 772 5522 0 0 2 chrUextra 24535604 24536229 -4468427 + ROO_I LTR Pao 5596 6219 -2037 1 772 5629 9 0 2 chrUextra 24536343 24536982 -4467674 - R1_DM LINE R1 -868 4488 3851 1 772 5002 45 27 2 chrUextra 24537082 24537721 -4466935 - R1_DM LINE R1 -4079 1277 623 1 772 1154 15 0 0 chrUextra 24537821 24537953 -4466703 - Gypsy6_LTR LTR Gypsy -275 132 1 1 772 2494 161 12 8 chrUextra 24537956 24538456 -4466200 + SAR_DM Satellite Satellite 536 1037 -435 1 772 3419 46 53 0 chrUextra 24538744 24539198 -4465458 - PROTOP_A DNA P 0 1105 628 1 772 907 9 0 27 chrUextra 24539311 24539423 -4465233 - NTS_DM Other Other -107 133 25 1 772 1304 18 0 6 chrUextra 24539475 24539640 -4465016 - NTS_DM Other Other -39 201 38 1 772 877 9 0 35 chrUextra 24539640 24539753 -4464903 - NTS_DM Other Other -107 133 25 1 772 22 56 0 0 chrUextra 24539779 24539815 -4464841 + AT_rich Low_complexity Low_complexity 1 36 0 1 772 269 125 0 0 chrUextra 24539828 24539868 -4464788 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 772 5443 22 3 0 chrUextra 24540038 24540677 -4463979 + FW_DM LINE Jockey 3900 4540 -152 1 772 1771 174 14 8 chrUextra 24540777 24541415 -4463241 - SAR_DM Satellite Satellite -828 641 1 1 772 2752 183 12 24 chrUextra 24541516 24542154 -4462502 + SAR_DM Satellite Satellite 473 1103 -369 1 772 2440 104 8 39 chrUextra 24542255 24542890 -4461766 + DMSAT6 Satellite Satellite 1 615 -97 1 772 5169 19 3 5 chrUextra 24542994 24543633 -4461023 + PROTOP_A DNA P 286 923 -182 1 772 1560 0 25 15 chrUextra 24543734 24543935 -4460721 + NTS_DM Other Other 38 240 0 1 772 1940 0 17 13 chrUextra 24543935 24544174 -4460482 + NTS_DM Other Other 1 240 0 1 772 1656 20 0 0 chrUextra 24544174 24544372 -4460284 + NTS_DM Other Other 1 198 -42 1 772 5609 3 0 0 chrUextra 24544472 24545111 -4459545 + LSU-rRNA_Dme rRNA rRNA 268 906 -2994 1 772 2536 118 9 9 chrUextra 24545211 24545850 -4458806 + DMSAT6 Satellite Satellite 1 639 -119 1 772 3303 0 0 0 chrUextra 24545950 24546308 -4458348 - ROO_LTR LTR Pao -70 358 1 1 772 5398 27 0 2 chrUextra 24546689 24547328 -4457328 + NINJA_I LTR Pao 2198 2835 -3176 1 772 2812 191 3 20 chrUextra 24547430 24548067 -4456589 - SAR_DM Satellite Satellite -382 1090 465 1 772 3182 160 12 9 chrUextra 24548167 24548806 -4455850 + SAR_DM Satellite Satellite 379 1019 -453 1 772 256 59 0 0 chrUextra 24548907 24548941 -4455715 + HETA LINE telomeric 6045 6078 -3 1 772 1463 171 14 78 chrUextra 24548987 24549425 -4455231 + TAHRE LINE telomeric 20 429 -10034 1 772 654 168 8 0 chrUextra 24549425 24549544 -4455112 + TAHRE LINE telomeric 843 962 -9501 1 772 695 11 23 0 chrUextra 24549645 24549732 -4454924 + (TTATA)n Simple_repeat Simple_repeat 2 90 0 1 772 1547 8 0 4 chrUextra 24549743 24549983 -4454673 + (TTATA)n Simple_repeat Simple_repeat 1 239 0 1 772 2617 20 0 0 chrUextra 24549983 24550284 -4454372 - BEL_LTR LTR Pao 0 361 61 1 772 777 11 0 0 chrUextra 24550384 24550474 -4454182 + (GAGAA)n Simple_repeat Simple_repeat 4 93 0 1 772 591 14 0 40 chrUextra 24551123 24551197 -4453459 - NTS_DM Other Other -145 95 25 1 772 1304 18 0 6 chrUextra 24551249 24551414 -4453242 - NTS_DM Other Other -39 201 38 1 772 907 9 0 27 chrUextra 24551414 24551526 -4453130 - NTS_DM Other Other -107 133 25 1 772 22 56 0 0 chrUextra 24551552 24551588 -4453068 + AT_rich Low_complexity Low_complexity 1 36 0 1 772 269 125 0 0 chrUextra 24551601 24551641 -4453015 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 772 262 150 0 0 chrUextra 24551684 24551724 -4452932 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 772 1738 183 8 39 chrUextra 24551877 24552240 -4452416 - TART LINE telomeric -4022 10455 10104 1 772 333 268 24 2 chrUextra 24552275 24552380 -4452276 - TAHRE LINE telomeric -3256 7207 7118 1 772 3075 168 11 9 chrUextra 24552601 24553240 -4451416 + SAR_DM Satellite Satellite 387 1026 -446 1 772 5453 20 24 0 chrUextra 24553340 24553979 -4450677 + R1_DM LINE R1 2886 3539 -1817 1 772 28 48 0 0 chrUextra 24554382 24554424 -4450232 + AT_rich Low_complexity Low_complexity 1 42 0 1 772 466 0 0 18 chrUextra 24554818 24554873 -4449783 - NTS_DM Other Other -186 54 1 1 772 1930 4 17 13 chrUextra 24554873 24555112 -4449544 - NTS_DM Other Other 0 240 1 1 772 1813 21 17 17 chrUextra 24555112 24555352 -4449304 - NTS_DM Other Other 0 240 1 1 772 636 30 38 38 chrUextra 24555352 24555457 -4449199 - NTS_DM Other Other 0 240 136 1 772 5714 14 0 0 chrUextra 24555557 24556196 -4448460 + BATUMI_I LTR Pao 5062 5700 -2263 1 772 2236 185 9 6 chrUextra 24556296 24556933 -4447723 - SAR_DM Satellite Satellite -736 638 1 1 772 2699 181 13 11 chrUextra 24557037 24557673 -4446983 + SAR_DM Satellite Satellite 224 860 -612 1 772 2339 95 37 18 chrUextra 24557774 24558394 -4446262 + DMSAT6 Satellite Satellite 1 631 -281 1 772 692 60 0 0 chrUextra 24558514 24558614 -4446042 + ARS406_DM Unknown Unknown 59 158 -195 1 772 2638 155 6 6 chrUextra 24558621 24559152 -4445504 - SAR_DM Satellite Satellite -569 903 373 1 772 1130 61 12 41 chrUextra 24559255 24559427 -4445229 + Baggins1 LINE LOA 5025 5191 -262 1 772 606 157 0 0 chrUextra 24559993 24560152 -4444504 + (CA)n Simple_repeat Simple_repeat 2 160 0 1 772 3128 18 0 2 chrUextra 24560155 24560630 -4444026 + DMRT1B LINE R1 1108 1687 -3496 1 772 4732 53 14 3 chrUextra 24560730 24561369 -4443287 + R1_DM LINE R1 237 882 -4474 1 772 5099 19 20 0 chrUextra 24561471 24562108 -4442548 + DOC2_DM LINE Jockey 1065 1714 -3079 1 772 5434 2 2 5 chrUextra 24562208 24562847 -4441809 - LSU-rRNA_Dme rRNA rRNA -2262 1638 1002 1 772 5239 14 3 0 chrUextra 24562947 24563575 -4441081 + Gypsy4_I LTR Gypsy 4138 4767 -1521 1 772 2460 29 3 0 chrUextra 24563686 24563997 -4440659 + R1_DM LINE R1 4755 5066 -290 1 772 954 26 0 0 chrUextra 24563994 24564108 -4440548 + R1_DM LINE R1 5243 5356 0 1 772 1208 60 6 0 chrUextra 24564141 24564308 -4440348 + R1_DM LINE R1 1 168 -5188 1 772 5265 0 2 3 chrUextra 24564425 24565064 -4439592 + ROO_I LTR Pao 621 1258 -6998 1 772 263 114 0 22 chrUextra 24565164 24565209 -4439447 - HETRP_DM Satellite Satellite -300 1572 1529 1 772 652 186 7 14 chrUextra 24565373 24565515 -4439141 - HETRP_DM Satellite Satellite -203 1669 1529 1 772 655 186 7 14 chrUextra 24565655 24565797 -4438859 - HETRP_DM Satellite Satellite -203 1669 1529 1 772 1580 0 0 6 chrUextra 24565906 24566087 -4438569 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 772 457 0 0 0 chrUextra 24566642 24566695 -4437961 - ROO_LTR LTR Pao -375 53 1 1 772 1131 122 6 0 chrUextra 24567060 24567240 -4437416 + DMRT1C LINE R1 475 655 -4788 1 772 251 122 0 0 chrUextra 24567240 24567281 -4437375 + DMRT1B LINE R1 65 105 -5078 1 772 292 306 48 48 chrUextra 24568550 24568756 -4435900 + Copia2_I LTR Copia 1392 1684 -2478 1 772 5134 22 0 9 chrUextra 24568859 24569498 -4435158 - R1_DM LINE R1 -2162 3194 2562 1 772 468 0 0 0 chrUextra 24569598 24569650 -4435006 + (TTGTG)n Simple_repeat Simple_repeat 4 55 0 1 772 504 0 0 0 chrUextra 24570345 24570401 -4434255 + (TTCTC)n Simple_repeat Simple_repeat 3 58 0 1 772 792 0 0 0 chrUextra 24571076 24571164 -4433492 + (GAGAA)n Simple_repeat Simple_repeat 2 89 0 1 772 30 45 0 0 chrUextra 24571972 24572016 -4432640 + AT_rich Low_complexity Low_complexity 1 44 0 1 772 703 40 60 0 chrUextra 24572162 24572262 -4432394 - DNAREP1_DM LINE Penelope -488 106 1 1 772 41 72 0 0 chrUextra 24572360 24572443 -4432213 + AT_rich Low_complexity Low_complexity 1 83 0 1 772 1893 87 141 17 chrUextra 24572554 24573193 -4431463 + Gypsy12_I LTR Gypsy 4674 5391 -155 1 772 30 45 0 0 chrUextra 24573821 24573865 -4430791 + AT_rich Low_complexity Low_complexity 1 44 0 1 772 3563 2 2 0 chrUextra 24574032 24574452 -4430204 + Stalker2_LTR LTR Gypsy 4 424 0 1 772 1849 5 5 0 chrUextra 24574452 24574671 -4429985 + Stalker2_I LTR Gypsy 1 220 -7182 1 772 5028 34 9 0 chrUextra 24574771 24575410 -4429246 - R1_DM LINE R1 -2148 3208 2564 1 772 3669 16 2 0 chrUextra 24575512 24575955 -4428701 + FW_DM LINE Jockey 1750 2193 -2499 1 772 1549 20 0 0 chrUextra 24575954 24576149 -4428507 + FW_DM LINE Jockey 2600 2794 -1898 1 772 4121 41 45 9 chrUextra 24576249 24576888 -4427768 + PROTOP DNA P 133 750 -3730 1 772 4549 4 2 0 chrUextra 24576988 24577527 -4427129 + IDEFIX_LTR LTR Gypsy 55 594 0 1 772 5329 0 0 3 chrUextra 24577727 24578366 -4426290 + ROO_I LTR Pao 3056 3692 -4564 1 772 28 71 0 0 chrUextra 24578580 24578636 -4426020 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 29 47 0 0 chrUextra 24578674 24578717 -4425939 + AT_rich Low_complexity Low_complexity 1 43 0 1 772 28 71 0 0 chrUextra 24578761 24578817 -4425839 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 703 67 235 0 chrUextra 24578956 24579105 -4425551 - PROTOP_A DNA P -592 513 330 1 772 4961 46 2 5 chrUextra 24579205 24579844 -4424812 + BATUMI_I LTR Pao 3493 4129 -3834 1 772 2396 196 20 11 chrUextra 24579945 24580581 -4424075 - SAR_DM Satellite Satellite -1067 641 1 1 772 732 8 273 16 chrUextra 24580683 24580804 -4423852 + DIVER2_I LTR Pao 669 820 -3327 1 772 3759 35 19 52 chrUextra 24580784 24581322 -4423334 + DIVER2_I LTR Pao 1220 1739 -2408 1 772 22 70 0 0 chrUextra 24581473 24581516 -4423140 + AT_rich Low_complexity Low_complexity 1 43 0 1 772 1003 100 251 0 chrUextra 24581606 24581865 -4422791 + DNAREP1_DM LINE Penelope 271 594 0 1 772 34 24 0 0 chrUextra 24582411 24582452 -4422204 + AT_rich Low_complexity Low_complexity 1 41 0 1 772 2327 101 55 12 chrUextra 24582900 24583539 -4421117 - DMSAT6 Satellite Satellite -284 665 1 1 772 2283 96 12 33 chrUextra 24583639 24584278 -4420378 + DMSAT6 Satellite Satellite 1 625 -51 1 772 2166 108 6 52 chrUextra 24584378 24585017 -4419639 - DMSAT6 Satellite Satellite 0 609 1 1 772 3370 78 11 6 chrUextra 24585119 24585711 -4418945 - G2_DM LINE Jockey -2702 400 4 1 772 344 21 0 0 chrUextra 24585709 24585756 -4418900 + STALKER4_I LTR Gypsy 6458 6504 -26 1 772 5059 25 3 2 chrUextra 24585856 24586488 -4418168 - FW_DM LINE Jockey -1804 2888 2256 1 772 2920 156 10 10 chrUextra 24586596 24587213 -4417443 - SAR_DM Satellite Satellite -478 994 378 1 772 2679 183 25 8 chrUextra 24587334 24587967 -4416689 + SAR_DM Satellite Satellite 294 937 -535 1 772 2484 189 8 22 chrUextra 24588073 24588702 -4415954 + SAR_DM Satellite Satellite 499 1118 -354 1 772 314 202 0 21 chrUextra 24588616 24588712 -4415944 - XDMR_DM Unknown Unknown 0 360 267 1 772 3156 0 0 0 chrUextra 24588858 24589218 -4415438 - DMRT1B LINE R1 0 5183 4824 1 772 224 205 0 0 chrUextra 24589227 24589266 -4415390 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 772 192 77 0 0 chrUextra 24589425 24589451 -4415205 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 772 4527 6 0 0 chrUextra 24589551 24590077 -4414579 + R1_DM LINE R1 4831 5356 0 1 772 1000 9 0 0 chrUextra 24590075 24590190 -4414466 + LSU-rRNA_Dme rRNA rRNA 2640 2754 -1146 1 772 28 48 0 0 chrUextra 24590574 24590616 -4414040 + AT_rich Low_complexity Low_complexity 1 42 0 1 772 934 27 0 0 chrUextra 24591029 24591141 -4413515 + R1_DM LINE R1 5243 5354 -2 1 772 3565 71 4 4 chrUextra 24591176 24591668 -4412988 + R1_DM LINE R1 1 492 -4864 1 772 4741 38 2 16 chrUextra 24591768 24592407 -4412249 - BATUMI_I LTR Pao -4629 3334 2705 1 772 631 314 46 35 chrUextra 24592621 24593037 -4411619 + GTWIN_I LTR Gypsy 2969 3538 -2883 1 772 2918 165 10 10 chrUextra 24593246 24593871 -4410785 - SAR_DM Satellite Satellite -479 993 369 1 772 3480 37 0 0 chrUextra 24593985 24594415 -4410241 - R1_DM LINE R1 -3530 1826 1397 1 772 1622 35 0 0 chrUextra 24594422 24594624 -4410032 + FW_DM LINE Jockey 1 202 -4490 1 772 5318 8 0 0 chrUextra 24594724 24595363 -4409293 - NINJA_I LTR Pao -4742 1269 631 1 772 1649 169 22 6 chrUextra 24595471 24595833 -4408823 + SAR_DM Satellite Satellite 536 903 -569 1 772 657 53 53 0 chrUextra 24595748 24595843 -4408813 - ARS406_DM Unknown Unknown -164 189 90 1 772 1075 194 4 8 chrUextra 24595848 24596102 -4408554 + SAR_DM Satellite Satellite 496 748 -724 1 772 4792 46 28 5 chrUextra 24596202 24596841 -4407815 + TART LINE telomeric 9724 10377 -4100 1 772 3450 237 11 35 chrUextra 24596942 24598316 -4406340 + SAR_DM Satellite Satellite 1 1340 -404 1 772 2525 161 34 45 chrUextra 24598419 24599058 -4405598 - SAR_DM Satellite Satellite -641 831 200 1 772 977 7 28 21 chrUextra 24599158 24599302 -4405354 + NTS_DM Other Other 96 240 0 1 772 1301 6 0 18 chrUextra 24599302 24599467 -4405189 + NTS_DM Other Other 1 162 -78 1 772 488 119 36 0 chrUextra 24599577 24599661 -4404995 + NTS_DM Other Other 4 90 -150 1 772 2526 174 21 25 chrUextra 24599906 24600533 -4404123 + SAR_DM Satellite Satellite 191 814 -658 1 772 2450 183 5 30 chrUextra 24600640 24601236 -4403420 + SAR_DM Satellite Satellite 496 1076 -396 1 772 2752 179 11 9 chrUextra 24601375 24602014 -4402642 + SAR_DM Satellite Satellite 415 1054 -418 1 772 2921 160 14 14 chrUextra 24602114 24602748 -4401908 - SAR_DM Satellite Satellite -593 879 246 1 772 225 156 0 0 chrUextra 24602708 24602753 -4401903 + ARS406_DM Unknown Unknown 1 45 -308 1 772 2670 179 33 9 chrUextra 24602856 24603492 -4401164 - SAR_DM Satellite Satellite -549 923 273 1 772 2902 174 5 9 chrUextra 24603592 24604231 -4400425 + SAR_DM Satellite Satellite 380 1015 -457 1 772 5297 0 0 27 chrUextra 24604331 24604970 -4399686 - QUASIMODO_I LTR Gypsy -5204 856 235 1 772 5337 9 2 2 chrUextra 24605070 24605709 -4398947 - R1_DM LINE R1 -1102 4254 3616 1 772 1123 57 27 49 chrUextra 24605809 24605993 -4398663 - Gypsy12_I LTR Gypsy -5366 180 1 1 772 328 211 34 34 chrUextra 24606007 24606154 -4398502 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 1 772 852 169 102 31 chrUextra 24606212 24606438 -4398218 - Gypsy12_LTR LTR Gypsy -828 1508 1267 1 772 960 168 33 22 chrUextra 24606568 24606975 -4397681 - SAR_DM Satellite Satellite -680 625 120 1 772 478 197 8 0 chrUextra 24606975 24607092 -4397564 + ARS406_DM Unknown Unknown 1 118 -235 1 772 960 168 33 22 chrUextra 24607092 24607186 -4397470 - SAR_DM Satellite Satellite -680 119 1 1 772 2934 174 6 8 chrUextra 24607287 24607926 -4396730 + SAR_DM Satellite Satellite 407 1044 -428 1 772 5088 28 28 2 chrUextra 24608026 24608665 -4395991 - DMCR1A LINE CR1 -874 3596 2941 1 772 1597 20 93 0 chrUextra 24608765 24608969 -4395687 - PROTOP_B DNA P -930 223 1 1 772 1301 6 0 18 chrUextra 24610295 24610460 -4394196 - NTS_DM Other Other -78 162 1 1 772 1825 8 17 13 chrUextra 24610460 24610699 -4393957 - NTS_DM Other Other 0 240 1 1 772 1328 0 22 16 chrUextra 24610699 24610882 -4393774 - NTS_DM Other Other 0 240 57 1 772 656 0 0 0 chrUextra 24611721 24611792 -4392864 - NTS_DM Other Other -132 108 38 1 772 936 9 0 27 chrUextra 24611792 24611904 -4392752 - NTS_DM Other Other -107 133 25 1 772 22 56 0 0 chrUextra 24611931 24611967 -4392689 + AT_rich Low_complexity Low_complexity 1 36 0 1 772 278 176 0 19 chrUextra 24611980 24612032 -4392624 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 268 196 0 19 chrUextra 24612063 24612115 -4392541 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 268 196 0 19 chrUextra 24612155 24612207 -4392449 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 268 196 0 19 chrUextra 24612247 24612299 -4392357 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 5897 2 2 2 chrUextra 24612460 24613099 -4391557 + LSU-rRNA_Dme rRNA rRNA 1980 2618 -1282 1 772 2475 105 9 19 chrUextra 24613199 24613838 -4390818 - DMSAT6 Satellite Satellite -68 632 1 1 772 3066 179 8 6 chrUextra 24613954 24614577 -4390079 + SAR_DM Satellite Satellite 326 949 -523 1 772 5639 5 3 3 chrUextra 24614677 24615316 -4389340 + R1_DM LINE R1 3467 4105 -1251 1 772 202 265 0 0 chrUextra 24616002 24616051 -4388605 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 772 5763 0 2 5 chrUextra 24616166 24616793 -4387863 - SSU-rRNA_Dme rRNA rRNA 0 1995 1371 1 772 2442 94 6 50 chrUextra 24616895 24617531 -4387125 + DMSAT6 Satellite Satellite 1 607 -85 1 772 5476 27 0 0 chrUextra 24617631 24618267 -4386389 - R1_DM LINE R1 -2259 3097 2462 1 772 5558 22 16 0 chrUextra 24618369 24619007 -4385649 - DMCR1A LINE CR1 -1262 3208 2561 1 772 3944 151 14 0 chrUextra 24619107 24619745 -4384911 + Gypsy5_I LTR Gypsy 5754 6400 -109 1 772 2370 108 44 8 chrUextra 24619845 24620483 -4384173 + DMSAT6 Satellite Satellite 1 661 -46 1 772 318 0 0 0 chrUextra 24620583 24620627 -4384029 + Copia_LTR LTR Copia 233 276 0 1 772 5506 7 0 0 chrUextra 24620627 24621221 -4383435 - MDG3_I LTR Gypsy -4196 790 197 1 772 3401 254 36 33 chrUextra 24621323 24622693 -4381963 + SAR_DM Satellite Satellite 1 1374 -208 1 772 853 0 35 26 chrUextra 24622797 24622913 -4381743 + NTS_DM Other Other 124 240 0 1 772 1967 13 17 13 chrUextra 24622913 24623152 -4381504 + NTS_DM Other Other 1 240 0 1 772 1369 12 0 18 chrUextra 24623152 24623317 -4381339 + NTS_DM Other Other 1 162 -78 1 772 2970 173 14 11 chrUextra 24623536 24624167 -4380489 - SAR_DM Satellite Satellite -645 827 195 1 772 2564 40 3 0 chrUextra 24624273 24624594 -4380062 - TRANSIB2 DNA Transib -2522 322 1 1 772 2681 43 0 9 chrUextra 24624594 24624911 -4379745 - PROTOP_A DNA P -40 1065 752 1 772 415 287 43 16 chrUextra 24625018 24625202 -4379454 - XDMR Unknown Unknown -172 189 1 1 772 1297 276 29 39 chrUextra 24625054 24625615 -4379041 + SAR_DM Satellite Satellite 566 1120 -352 1 772 5294 46 2 2 chrUextra 24625750 24626387 -4378269 + R1_DM LINE R1 991 1627 -3729 1 772 501 129 23 12 chrUextra 24626491 24626577 -4378079 - NTS_DM Other Other -150 90 4 1 772 1401 6 0 18 chrUextra 24626688 24626853 -4377803 - NTS_DM Other Other -78 162 1 1 772 1992 4 17 13 chrUextra 24626853 24627092 -4377564 - NTS_DM Other Other 0 240 1 1 772 5635 14 0 14 chrUextra 24627225 24627863 -4376793 - Gypsy12_I LTR Gypsy -148 5398 4770 1 772 3016 174 8 25 chrUextra 24627963 24628600 -4376056 + SAR_DM Satellite Satellite 465 1090 -382 1 772 5392 30 28 3 chrUextra 24628701 24629339 -4375317 + DMCR1A LINE CR1 3029 3682 -788 1 772 3257 164 14 9 chrUextra 24629439 24630077 -4374579 - SAR_DM Satellite Satellite -456 1016 376 1 772 2398 123 8 32 chrUextra 24630180 24630815 -4373841 - DMSAT6 Satellite Satellite -28 619 1 1 772 5797 8 0 0 chrUextra 24630915 24631553 -4373103 + R1_DM LINE R1 4184 4821 -535 1 772 5469 30 2 0 chrUextra 24631653 24632291 -4372365 + R1_DM LINE R1 2728 3366 -1990 1 772 21 89 0 0 chrUextra 24632629 24632685 -4371971 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 2988 0 3 3 chrUextra 24632704 24633029 -4371627 - SSU-rRNA_Dme rRNA rRNA 0 1995 1671 1 772 1620 0 0 0 chrUextra 24633587 24633767 -4370889 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 1 772 5872 3 2 2 chrUextra 24633867 24634505 -4370151 + LSU-rRNA_Dme rRNA rRNA 3005 3642 -258 1 772 4463 8 0 0 chrUextra 24634605 24635095 -4369561 + R1_DM LINE R1 4867 5356 0 1 772 1354 13 0 0 chrUextra 24635093 24635243 -4369413 + LSU-rRNA_Dme rRNA rRNA 2640 2789 -1111 1 772 570 12 0 0 chrUextra 24635343 24635423 -4369233 + FW_DM LINE Jockey 4613 4692 0 1 772 3340 13 3 0 chrUextra 24635419 24635797 -4368859 - POGO DNA Pogo -229 1892 1514 1 772 1749 0 0 0 chrUextra 24635788 24635981 -4368675 - POGO DNA Pogo -1574 547 355 1 772 2810 76 11 19 chrUextra 24636081 24636715 -4367941 - DMSAT6 Satellite Satellite -57 629 1 1 772 227 282 0 0 chrUextra 24636843 24636914 -4367742 + C-rich Low_complexity Low_complexity 1 71 0 1 772 658 25 57 16 chrUextra 24637557 24637679 -4366977 + (TAA)n Simple_repeat Simple_repeat 2 128 0 1 772 4070 19 0 6 chrUextra 24637679 24638195 -4366461 - HMSBEAGLE_I LTR Gypsy -5733 796 284 1 772 3180 166 19 9 chrUextra 24638295 24638929 -4365727 - SAR_DM Satellite Satellite -587 885 246 1 772 21 89 0 0 chrUextra 24639187 24639243 -4365413 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 3792 2 2 0 chrUextra 24639262 24639671 -4364985 - SSU-rRNA_Dme rRNA rRNA 0 1995 1586 1 772 5537 22 5 0 chrUextra 24639771 24640407 -4364249 + Gypsy4_I LTR Gypsy 4129 4767 -1521 1 772 3139 159 14 16 chrUextra 24640509 24641147 -4363509 - SAR_DM Satellite Satellite -539 933 297 1 96 2638 82 27 22 chrUextra 24641251 24641873 -4362783 + DMSAT6 Satellite Satellite 1 624 -29 1 773 681 123 0 0 chrUextra 24641985 24642091 -4362565 + (TA)n Simple_repeat Simple_repeat 1 106 0 1 773 4609 6 0 0 chrUextra 24642093 24642600 -4362056 - DM176_LTR LTR Gypsy 0 507 1 1 773 5687 5 2 2 chrUextra 24642726 24643361 -4361295 - R1_DM LINE R1 -1157 4199 3565 1 773 784 89 16 8 chrUextra 24643461 24643585 -4361071 - ARS406_DM Unknown Unknown -228 125 1 1 773 2866 182 16 7 chrUextra 24643491 24644099 -4360557 + SAR_DM Satellite Satellite 195 808 -664 1 773 988 81 6 17 chrUextra 24644199 24644828 -4359828 + RSP Satellite Satellite 1 622 0 1 773 4390 59 64 47 chrUextra 24644937 24645575 -4359081 + ROOA_I LTR Pao 2116 2764 -4085 1 773 3095 172 8 8 chrUextra 24645675 24646295 -4358361 + SAR_DM Satellite Satellite 457 1076 -396 1 773 331 50 0 144 chrUextra 24647153 24647341 -4357315 + (CAAGA)n Simple_repeat Simple_repeat 2 162 0 1 773 376 0 0 167 chrUextra 24647320 24647535 -4357121 + (ACATG)n Simple_repeat Simple_repeat 2 180 0 1 773 5842 2 0 5 chrUextra 24647889 24648527 -4356129 - LSU-rRNA_Dme rRNA rRNA -773 3127 2493 1 773 2096 25 0 0 chrUextra 24648627 24648865 -4355791 - PROTOP_A DNA P -867 238 1 1 773 1362 214 177 50 chrUextra 24649401 24649982 -4354674 - Gypsy12_LTR LTR Gypsy -827 1509 855 1 773 3098 178 12 14 chrUextra 24650103 24650741 -4353915 + SAR_DM Satellite Satellite 284 920 -552 1 773 1890 251 54 17 chrUextra 24650903 24651479 -4353177 + DM297_I LTR Gypsy 3650 4246 -1921 1 773 5767 8 2 0 chrUextra 24651579 24652217 -4352439 + DOC2_DM LINE Jockey 2267 2905 -1888 1 773 787 0 105 0 chrUextra 24652341 24652645 -4352011 + (CAGAC)n Simple_repeat Simple_repeat 1 336 0 1 773 2659 23 0 3 chrUextra 24652646 24652955 -4351701 + DMRT1B LINE R1 1903 2210 -2973 1 773 5723 0 2 3 chrUextra 24653055 24653693 -4350963 - R1_DM LINE R1 -3624 1732 1096 1 773 2761 185 13 25 chrUextra 24654535 24655167 -4349489 + SAR_DM Satellite Satellite 496 1119 -353 1 773 5695 12 0 0 chrUextra 24655269 24655907 -4348749 - FW_DM LINE Jockey -1674 3018 2381 1 773 4117 2 0 0 chrUextra 24656007 24656451 -4348205 - LSU-rRNA_Dme rRNA rRNA -817 3083 2640 1 773 942 10 0 0 chrUextra 24656449 24656551 -4348105 - R1_DM LINE R1 0 5356 5255 1 773 703 26 0 0 chrUextra 24656551 24656629 -4348027 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2578 1 773 4644 2 2 0 chrUextra 24656745 24657245 -4347411 + SSU-rRNA_Dme rRNA rRNA 1495 1995 0 1 773 22 88 0 0 chrUextra 24657264 24657321 -4347335 + AT_rich Low_complexity Low_complexity 1 57 0 1 773 1721 75 50 3 chrUextra 24657483 24657765 -4346891 + TART_B1 LINE telomeric 2111 2405 -8249 1 773 243 32 0 0 chrUextra 24657765 24657796 -4346860 + PROTOP_A DNA P 1 31 -1074 1 773 2648 19 0 46 chrUextra 24657794 24658121 -4346535 + PROTOP_A DNA P 728 1039 -66 1 773 5641 22 0 0 chrUextra 24658221 24658859 -4345797 - FW_DM LINE Jockey -3799 893 256 1 773 600 14 0 0 chrUextra 24658959 24659032 -4345624 + NTS_DM Other Other 61 133 -107 1 773 1350 18 0 6 chrUextra 24659032 24659197 -4345459 + NTS_DM Other Other 38 201 -39 1 773 936 9 0 27 chrUextra 24659249 24659361 -4345295 + NTS_DM Other Other 25 133 -107 1 773 1521 15 25 20 chrUextra 24659361 24659563 -4345093 + NTS_DM Other Other 38 240 0 1 773 274 59 0 0 chrUextra 24659563 24659597 -4345059 + NTS_DM Other Other 1 34 -206 1 773 22 70 0 0 chrUextra 24659707 24659750 -4344906 + AT_rich Low_complexity Low_complexity 1 43 0 1 773 1094 101 252 0 chrUextra 24659843 24660100 -4344556 + DNAREP1_DM LINE Penelope 273 594 0 1 773 447 19 0 0 chrUextra 24660437 24660489 -4344167 + (TTCTC)n Simple_repeat Simple_repeat 1 52 0 1 773 2715 190 18 8 chrUextra 24661173 24661772 -4342884 - SAR_DM Satellite Satellite -676 796 192 1 773 957 89 0 0 chrUextra 24661676 24661811 -4342845 + ARS406_DM Unknown Unknown 1 135 -218 1 773 979 96 47 123 chrUextra 24661911 24662140 -4342516 - Gypsy3_LTR LTR Gypsy -178 242 1 1 773 2428 82 4 8 chrUextra 24662140 24662494 -4342162 - Gypsy3_I LTR Gypsy 0 6177 5892 1 773 2801 182 11 24 chrUextra 24662649 24663285 -4341371 + SAR_DM Satellite Satellite 486 1113 -359 1 773 1431 6 0 0 chrUextra 24663387 24663547 -4341109 - NTS_DM Other Other -80 160 1 1 773 1856 25 17 17 chrUextra 24663547 24663787 -4340869 - NTS_DM Other Other 0 240 1 1 773 1478 35 20 20 chrUextra 24663787 24663990 -4340666 - NTS_DM Other Other 0 240 38 1 773 266 0 0 0 chrUextra 24663990 24664025 -4340631 - NTS_DM Other Other -107 133 99 1 773 2241 0 0 0 chrUextra 24664125 24664375 -4340281 + DM176_I LTR Gypsy 6171 6420 0 1 773 2373 7 0 78 chrUextra 24664375 24664682 -4339974 + DM176_LTR LTR Gypsy 1 283 -224 1 773 638 25 50 0 chrUextra 24664683 24664763 -4339893 + DM176_LTR LTR Gypsy 251 334 -173 1 773 5496 28 0 0 chrUextra 24664863 24665501 -4339155 + R1_DM LINE R1 2080 2717 -2639 1 773 2697 7 3 0 chrUextra 24665601 24665900 -4338756 + DOC2_DM LINE Jockey 3261 3560 -1233 1 773 5315 0 3 42 chrUextra 24666339 24666977 -4337679 + LSU-rRNA_Dme rRNA rRNA 32 644 -3256 1 773 5340 5 2 3 chrUextra 24667077 24667715 -4336941 + R1_DM LINE R1 3350 3986 -1370 1 773 5386 17 3 0 chrUextra 24667815 24668453 -4336203 - Gypsy12_I LTR Gypsy -1052 4494 3855 1 773 4931 31 55 2 chrUextra 24668553 24669191 -4335465 - R1_DM LINE R1 -1886 3470 2799 1 773 3817 0 0 0 chrUextra 24669495 24669929 -4334727 - LSU-rRNA_Dme rRNA rRNA -978 2922 2489 1 773 2700 181 9 9 chrUextra 24670029 24670660 -4333996 + SAR_DM Satellite Satellite 446 1076 -396 1 773 4936 21 52 14 chrUextra 24670767 24671403 -4333253 + FW_DM LINE Jockey 1838 2497 -2195 1 773 1013 175 30 13 chrUextra 24671539 24672137 -4332519 - SAR_DM Satellite Satellite -680 607 1 1 773 508 13 49 37 chrUextra 24672243 24672324 -4332332 + NTS_DM Other Other 159 240 0 1 773 1756 17 17 17 chrUextra 24672324 24672564 -4332092 + NTS_DM Other Other 1 240 0 1 773 1759 17 17 17 chrUextra 24672564 24672804 -4331852 + NTS_DM Other Other 1 240 0 1 773 638 26 0 0 chrUextra 24672804 24672881 -4331775 + NTS_DM Other Other 1 77 -163 1 773 2945 162 16 16 chrUextra 24672981 24673619 -4331037 + SAR_DM Satellite Satellite 378 1015 -457 1 773 4794 41 27 8 chrUextra 24673719 24674357 -4330299 - IVK_DM LINE I -1193 4209 3560 1 773 5134 16 14 0 chrUextra 24674457 24675092 -4329564 + PROTOP_A DNA P 54 697 -408 1 773 2094 170 67 24 chrUextra 24675937 24676558 -4328098 - SAR_DM Satellite Satellite -435 647 1 1 773 2851 220 14 29 chrUextra 24676671 24678032 -4326624 + SAR_DM Satellite Satellite 1 1341 -539 1 773 956 65 0 0 chrUextra 24677909 24678047 -4326609 - ARS406_DM Unknown Unknown -164 189 52 1 773 5076 11 0 0 chrUextra 24678147 24678785 -4325871 - QUASIMODO_I LTR Gypsy -523 5537 4900 1 773 5487 8 2 0 chrUextra 24678885 24679523 -4325133 + Invader1_I LTR Gypsy 1423 2061 -1125 1 773 2296 197 17 22 chrUextra 24679623 24680261 -4324395 + SAR_DM Satellite Satellite 484 1118 -354 1 773 1040 209 27 11 chrUextra 24680362 24680624 -4324032 + TOM_I LTR Gypsy 3759 4024 -2088 1 773 345 229 90 60 chrUextra 24680639 24680839 -4323817 - Gypsy_LTR LTR Gypsy -20 462 257 1 773 4985 14 20 0 chrUextra 24681099 24681737 -4322919 - Invader2_I LTR Gypsy -3919 673 23 1 773 5129 20 2 0 chrUextra 24681837 24682475 -4322181 + STALKER4_I LTR Gypsy 2276 2914 -3616 1 773 2409 158 19 72 chrUextra 24682577 24683171 -4321485 + HETA LINE telomeric 542 1103 -4978 1 773 5415 14 0 0 chrUextra 24684051 24684689 -4319967 - Gypsy6_I LTR Gypsy -29 6983 6346 1 773 2620 188 27 6 chrUextra 24684789 24685427 -4319229 - SAR_DM Satellite Satellite -549 923 273 1 773 5125 33 0 5 chrUextra 24685527 24686165 -4318491 - BATUMI_I LTR Pao -2760 5203 4569 1 773 2530 178 43 19 chrUextra 24686266 24686903 -4317753 + SAR_DM Satellite Satellite 1 652 -270 1 773 5515 0 2 2 chrUextra 24687003 24687638 -4317018 + SSU-rRNA_Dme rRNA rRNA 1334 1968 -27 1 773 2503 180 11 22 chrUextra 24687741 24688366 -4316290 + SAR_DM Satellite Satellite 501 1118 -354 1 773 265 159 32 0 chrUextra 24688312 24688375 -4316281 - XDMR Unknown Unknown 0 361 297 1 773 2732 169 18 11 chrUextra 24688484 24689107 -4315549 + SAR_DM Satellite Satellite 332 958 -514 1 773 5376 2 0 0 chrUextra 24689217 24689855 -4314801 - ROO_I LTR Pao -4669 3587 2950 1 773 5220 31 0 0 chrUextra 24689955 24690593 -4314063 + DIVER_I LTR Pao 1431 2068 -3575 1 773 783 0 11 0 chrUextra 24690693 24690786 -4313870 - SSU-rRNA_Dme rRNA rRNA -1901 94 1 1 773 32 0 0 0 chrUextra 24690918 24690950 -4313706 + AT_rich Low_complexity Low_complexity 1 32 0 1 773 28 48 0 0 chrUextra 24691278 24691320 -4313336 + AT_rich Low_complexity Low_complexity 1 42 0 1 773 2227 4 0 0 chrUextra 24692169 24692425 -4312231 - HOBO DNA hAT -2760 256 1 1 773 1305 0 0 0 chrUextra 24694383 24694528 -4310128 + (GAGAA)n Simple_repeat Simple_repeat 4 148 0 1 773 3859 113 43 0 chrUextra 24695125 24695726 -4308930 - TART_B1 LINE telomeric -5709 4945 4319 1 773 316 51 0 0 chrUextra 24695720 24695759 -4308897 - TART_B1 LINE telomeric -7129 3525 3487 1 773 2904 14 89 0 chrUextra 24695859 24696497 -4308159 + NINJA_I LTR Pao 3332 4026 -1985 1 773 5075 16 5 3 chrUextra 24696597 24697233 -4307423 + ACCORD2_I LTR Gypsy 2903 3539 -3673 1 773 336 0 0 0 chrUextra 24697335 24697380 -4307276 + NTS_DM Other Other 89 133 -107 1 773 1252 18 0 6 chrUextra 24697380 24697545 -4307111 + NTS_DM Other Other 38 201 -39 1 773 848 18 0 27 chrUextra 24697597 24697709 -4306947 + NTS_DM Other Other 25 133 -107 1 773 1417 20 20 20 chrUextra 24697709 24697912 -4306744 + NTS_DM Other Other 38 240 0 1 773 521 16 0 0 chrUextra 24697912 24697973 -4306683 + NTS_DM Other Other 1 61 -179 1 773 1620 13 0 0 chrUextra 24698076 24698388 -4306268 + (CATCT)n Simple_repeat Simple_repeat 1 312 0 1 773 2834 166 21 10 chrUextra 24698818 24699438 -4305218 + SAR_DM Satellite Satellite 332 958 -514 1 773 4123 45 45 0 chrUextra 24700285 24700839 -4303817 + CIRCE LINE Composite 5728 6356 0 1 773 632 36 0 12 chrUextra 24700839 24700922 -4303734 + CIRCE LINE Composite 1 82 -6274 1 773 733 307 92 26 chrUextra 24701039 24701658 -4302998 + Gypsy4_I LTR Gypsy 5021 5680 -608 1 773 5158 22 24 2 chrUextra 24701759 24702396 -4302260 + R1_DM LINE R1 3151 3801 -1555 1 773 1150 7 0 0 chrUextra 24703412 24703547 -4301109 + 5S_DM RNA RNA 1 135 0 1 773 773 31 0 0 chrUextra 24703774 24703870 -4300786 + 5S_DM RNA RNA 1 96 -39 1 773 3620 0 2 0 chrUextra 24703970 24704383 -4300273 + SSU-rRNA_Dme rRNA rRNA 1582 1995 0 1 773 21 89 0 0 chrUextra 24704402 24704458 -4300198 + AT_rich Low_complexity Low_complexity 1 56 0 1 773 5304 0 0 2 chrUextra 24704707 24705344 -4299312 - ROO_I LTR Pao -4722 3534 2899 1 773 2837 179 6 8 chrUextra 24705444 24706081 -4298575 - SAR_DM Satellite Satellite -570 902 267 1 773 323 291 39 8 chrUextra 24706183 24706311 -4298345 - Copia2_I LTR Copia -3464 698 567 1 773 1593 0 5 0 chrUextra 24706918 24707102 -4297554 + LSU-rRNA_Dme rRNA rRNA 2460 2644 -1256 1 773 3956 2 0 0 chrUextra 24707099 24707555 -4297101 + R1_DM LINE R1 4810 5265 -91 1 773 2600 174 33 20 chrUextra 24707656 24708291 -4296365 - SAR_DM Satellite Satellite -563 909 267 1 773 2985 166 9 8 chrUextra 24708392 24709029 -4295627 + SAR_DM Satellite Satellite 348 985 -487 1 773 5277 6 3 3 chrUextra 24709866 24710503 -4294153 - R1_DM LINE R1 -1402 3954 3318 1 773 2798 180 8 5 chrUextra 24710607 24711239 -4293417 + SAR_DM Satellite Satellite 246 879 -593 1 773 3482 258 13 37 chrUextra 24711340 24712711 -4291945 + SAR_DM Satellite Satellite 1 1337 -208 1 773 2423 96 11 31 chrUextra 24712814 24713450 -4291206 + DMSAT6 Satellite Satellite 1 622 -142 1 773 5275 27 0 0 chrUextra 24713551 24714188 -4290468 + DIVER_I LTR Pao 1416 2052 -3591 1 773 4856 16 0 36 chrUextra 24714288 24714925 -4289731 + G_DM LINE Jockey 3438 4051 -295 1 773 435 0 19 0 chrUextra 24715025 24715078 -4289578 - NTS_DM Other Other -186 54 1 1 773 1861 0 17 13 chrUextra 24715078 24715317 -4289339 - NTS_DM Other Other 0 240 1 1 773 1843 4 17 13 chrUextra 24715317 24715556 -4289100 - NTS_DM Other Other 0 240 1 1 773 632 20 38 38 chrUextra 24715556 24715661 -4288995 - NTS_DM Other Other 0 240 136 1 773 2704 175 13 9 chrUextra 24715762 24716397 -4288259 + SAR_DM Satellite Satellite 391 1027 -445 1 773 5347 2 2 2 chrUextra 24716499 24717136 -4287520 - FW_DM LINE Jockey -1423 3269 2633 1 773 2505 184 11 24 chrUextra 24717246 24717870 -4286786 + SAR_DM Satellite Satellite 496 1111 -361 1 773 2418 162 14 9 chrUextra 24717973 24718608 -4286048 - SAR_DM Satellite Satellite -1027 638 1 1 773 5148 19 11 2 chrUextra 24718712 24719347 -4285309 - DOC3_DM LINE Jockey -1397 3343 2703 1 773 5526 0 0 0 chrUextra 24719455 24720084 -4284572 - DIVER_I LTR Pao -4071 1572 944 1 773 4452 16 66 3 chrUextra 24720184 24720821 -4283835 - R1_DM LINE R1 -1359 3997 3321 1 773 2851 170 11 9 chrUextra 24720923 24721558 -4283098 - SAR_DM Satellite Satellite -577 895 260 1 773 212 167 61 0 chrUextra 24721664 24721730 -4282926 + CT-rich Low_complexity Low_complexity 5 74 0 1 773 5393 0 0 3 chrUextra 24722395 24723032 -4281624 + ROO_I LTR Pao 2453 3087 -5169 1 773 2268 101 19 21 chrUextra 24723139 24723769 -4280887 + DMSAT6 Satellite Satellite 1 628 -3 1 773 2890 157 11 16 chrUextra 24723869 24724491 -4280165 - SAR_DM Satellite Satellite -485 987 369 1 773 1649 13 4 9 chrUextra 24724608 24724838 -4279818 + STALKER4_I LTR Gypsy 6302 6530 0 1 773 3206 35 0 2 chrUextra 24724838 24725238 -4279418 + STALKER4_LTR LTR Gypsy 1 399 -3 1 773 2037 12 0 19 chrUextra 24725343 24725604 -4279052 + DOC2_DM LINE Jockey 4538 4793 0 1 773 1716 159 16 8 chrUextra 24725612 24725980 -4278676 - SAR_DM Satellite Satellite -722 750 380 1 773 2439 97 25 16 chrUextra 24726080 24726717 -4277939 - DMSAT6 Satellite Satellite -100 643 1 1 773 3220 101 96 22 chrUextra 24726817 24727454 -4277202 - PROTOP_B DNA P -73 1080 397 1 773 897 173 102 15 chrUextra 24727822 24728027 -4276629 + DMLTR5 LTR Gypsy 44 266 0 1 773 334 66 65 16 chrUextra 24728026 24728088 -4276568 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 773 289 107 70 18 chrUextra 24728110 24728167 -4276489 + HMSBEAGLE_I LTR Gypsy 175 234 -6295 1 773 4851 22 3 5 chrUextra 24728291 24728928 -4275728 - TART LINE telomeric -4831 9646 9011 1 773 3569 114 35 5 chrUextra 24729028 24729594 -4275062 - Gypsy12_I LTR Gypsy -3185 2361 1779 1 773 31 26 0 0 chrUextra 24729949 24729987 -4274669 + AT_rich Low_complexity Low_complexity 1 38 0 1 773 1037 51 0 0 chrUextra 24730502 24730639 -4274017 + PROTOP_A DNA P 163 299 -806 1 773 2194 56 91 0 chrUextra 24730626 24731139 -4273517 + PROTOP_A DNA P 520 945 -160 1 773 1611 0 0 0 chrUextra 24731697 24731876 -4272780 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 1 773 1770 138 55 13 chrUextra 24732174 24732571 -4272085 + ROVER-I_DM LTR Gypsy 6153 6566 -18 1 773 2232 124 27 11 chrUextra 24732713 24733349 -4271307 + DMSAT6 Satellite Satellite 1 645 -40 1 773 5300 9 0 0 chrUextra 24734187 24734824 -4269832 - IDEFIX_I LTR Gypsy -3001 2627 1991 1 773 621 193 7 14 chrUextra 24734977 24735119 -4269537 - HETRP_DM Satellite Satellite -203 1669 1529 1 773 681 179 7 14 chrUextra 24735256 24735398 -4269258 - HETRP_DM Satellite Satellite -203 1669 1529 1 773 252 179 36 0 chrUextra 24735675 24735731 -4268925 - TART_B1 LINE telomeric -10155 499 442 1 773 1303 13 0 0 chrUextra 24735765 24735918 -4268738 - TART LINE telomeric -9789 4688 4536 1 773 2980 37 0 0 chrUextra 24735918 24736298 -4268358 - HETA LINE telomeric -1 6080 5701 1 773 2892 0 3 0 chrUextra 24737135 24737479 -4267177 + FW_DM LINE Jockey 4348 4692 0 1 773 2339 31 0 0 chrUextra 24737479 24737772 -4266884 - DOC2_DM LINE Jockey -4037 756 464 1 773 2766 175 11 11 chrUextra 24737872 24738509 -4266147 + SAR_DM Satellite Satellite 432 1068 -404 1 773 2618 178 6 24 chrUextra 24739349 24739983 -4264673 + SAR_DM Satellite Satellite 496 1118 -354 1 773 2953 173 6 8 chrUextra 24740086 24740720 -4263936 - SAR_DM Satellite Satellite -411 1061 429 1 773 2064 0 0 4 chrUextra 24740820 24741074 -4263582 - HMSBEAGLE_I LTR Gypsy -5301 1228 976 1 773 633 51 42 17 chrUextra 24741074 24741194 -4263462 + (TAA)n Simple_repeat Simple_repeat 3 125 0 1 773 1819 23 0 11 chrUextra 24741194 24741457 -4263199 - HMSBEAGLE_I LTR Gypsy -5733 796 537 1 773 2856 176 13 3 chrUextra 24741560 24742194 -4262462 + SAR_DM Satellite Satellite 230 869 -603 1 773 21 89 0 0 chrUextra 24742526 24742582 -4262074 + AT_rich Low_complexity Low_complexity 1 56 0 1 773 23 68 0 0 chrUextra 24742620 24742664 -4261992 + AT_rich Low_complexity Low_complexity 1 44 0 1 773 26 30 0 0 chrUextra 24742710 24742743 -4261913 + AT_rich Low_complexity Low_complexity 1 33 0 1 773 2800 32 60 5 chrUextra 24743031 24743666 -4260990 + PROTOP_A DNA P 435 1104 -1 1 773 5203 25 5 2 chrUextra 24743768 24744405 -4260251 + R1_DM LINE R1 4167 4805 -551 1 773 4971 14 16 0 chrUextra 24744505 24745142 -4259514 - Invader2_I LTR Gypsy -2583 2009 1363 1 773 2331 181 40 27 chrUextra 24745253 24745879 -4258777 - SAR_DM Satellite Satellite -355 1117 484 1 773 28 48 0 0 chrUextra 24746065 24746107 -4258549 + AT_rich Low_complexity Low_complexity 1 42 0 1 773 488 119 36 0 chrUextra 24746382 24746466 -4258190 - NTS_DM Other Other -150 90 4 1 773 2968 171 8 6 chrUextra 24746716 24747353 -4257303 + SAR_DM Satellite Satellite 388 1025 -447 1 773 2970 166 8 8 chrUextra 24747453 24748090 -4256566 - SAR_DM Satellite Satellite -494 978 342 1 773 5109 35 0 5 chrUextra 24748190 24748827 -4255829 - BATUMI_I LTR Pao -2556 5407 4774 1 773 2711 167 36 11 chrUextra 24748927 24749564 -4255092 - SAR_DM Satellite Satellite -451 1021 369 1 773 1270 0 0 0 chrUextra 24750401 24750547 -4254109 + Copia_I LTR Copia 4448 4593 0 1 773 2297 0 0 0 chrUextra 24750547 24750823 -4253833 + Copia_LTR LTR Copia 1 276 0 1 773 905 68 6 17 chrUextra 24751138 24751479 -4253177 - RSP Satellite Satellite -5 337 1 1 773 1620 0 3 0 chrUextra 24751479 24751772 -4252884 + (GAGAA)n Simple_repeat Simple_repeat 1 293 0 1 773 2788 176 9 8 chrUextra 24751876 24752512 -4252144 + SAR_DM Satellite Satellite 282 918 -554 1 773 5515 0 0 3 chrUextra 24752612 24753249 -4251407 + LSU-rRNA_Dme rRNA rRNA 2717 3351 -549 1 773 2870 173 11 8 chrUextra 24753349 24753983 -4250673 - SAR_DM Satellite Satellite -555 917 282 1 773 2871 171 9 9 chrUextra 24754086 24754723 -4249933 - SAR_DM Satellite Satellite -417 1055 419 1 773 5415 5 2 0 chrUextra 24754823 24755460 -4249196 - DOC LINE Jockey -3285 1440 803 1 773 2430 181 70 27 chrUextra 24755563 24756193 -4248463 - SAR_DM Satellite Satellite -610 656 1 1 773 246 150 0 0 chrUextra 24756303 24756343 -4248313 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 246 150 0 0 chrUextra 24756395 24756435 -4248221 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 22 56 0 0 chrUextra 24756440 24756476 -4248180 + AT_rich Low_complexity Low_complexity 1 36 0 1 773 3366 3 0 0 chrUextra 24756548 24756934 -4247722 - LSU-rRNA_Dme rRNA rRNA 0 3900 3515 1 773 901 272 24 83 chrUextra 24757039 24757532 -4247124 - Gypsy12_LTR LTR Gypsy -1348 988 525 1 773 229 268 0 0 chrUextra 24757544 24757600 -4247056 - Gypsy12_LTR LTR Gypsy -1816 464 409 1 773 2854 169 17 8 chrUextra 24757771 24758408 -4246248 + SAR_DM Satellite Satellite 383 1025 -447 1 773 2502 235 18 25 chrUextra 24758508 24759882 -4244774 + SAR_DM Satellite Satellite 1 1363 -539 1 773 5428 5 2 3 chrUextra 24759982 24760619 -4244037 - SSU-rRNA_Dme rRNA rRNA -444 1551 916 1 773 3025 114 126 33 chrUextra 24760719 24761356 -4243300 + BATUMI_I LTR Pao 850 1545 -6418 1 773 1294 0 0 0 chrUextra 24761456 24761610 -4243046 - NTS_DM Other Other -86 154 1 1 773 1781 13 17 17 chrUextra 24761610 24761850 -4242806 - NTS_DM Other Other 0 240 1 1 773 1705 25 17 17 chrUextra 24761850 24762089 -4242567 - NTS_DM Other Other 0 240 2 1 773 1222 18 0 12 chrUextra 24762193 24762359 -4242297 - NTS_DM Other Other -39 201 38 1 773 870 9 0 27 chrUextra 24762359 24762471 -4242185 - NTS_DM Other Other -107 133 25 1 773 22 56 0 0 chrUextra 24762497 24762533 -4242123 + AT_rich Low_complexity Low_complexity 1 36 0 1 773 255 125 0 0 chrUextra 24762546 24762586 -4242070 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 246 150 0 0 chrUextra 24762629 24762669 -4241987 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 246 150 0 0 chrUextra 24762721 24762761 -4241895 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 2210 89 35 24 chrUextra 24762932 24763567 -4241089 - DMSAT6 Satellite Satellite -48 642 1 1 773 5549 3 0 2 chrUextra 24763667 24764304 -4240352 - Invader4_I LTR Gypsy -1641 772 137 1 773 488 119 36 0 chrUextra 24764404 24764488 -4240168 - NTS_DM Other Other -150 90 4 1 773 1290 6 0 18 chrUextra 24764598 24764763 -4239893 - NTS_DM Other Other -78 162 1 1 773 1829 8 17 13 chrUextra 24764763 24765002 -4239654 - NTS_DM Other Other 0 240 1 1 773 4397 17 0 0 chrUextra 24765141 24765660 -4238996 + Gypsy6_I LTR Gypsy 6494 7012 0 1 773 966 9 0 0 chrUextra 24765662 24765777 -4238879 + Gypsy6_LTR LTR Gypsy 1 115 -292 1 773 5127 27 6 0 chrUextra 24765878 24766515 -4238141 - R1_DM LINE R1 -2070 3286 2646 1 773 2050 191 11 85 chrUextra 24766615 24767249 -4237407 - HETA LINE telomeric -2281 3800 3214 1 773 558 0 0 0 chrUextra 24767357 24767419 -4237237 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 1 773 4122 4 3 1 chrUextra 24768826 24769462 -4235194 - ROVER-I_DM LTR Gypsy -5778 806 246 1 773 615 200 7 14 chrUextra 24771213 24771355 -4233301 + HETRP_DM Satellite Satellite 1529 1669 -203 1 773 652 179 7 21 chrUextra 24771494 24771637 -4233019 + HETRP_DM Satellite Satellite 1529 1669 -203 1 773 5406 9 2 0 chrUextra 24771770 24772406 -4232250 - DOC2_DM LINE Jockey -793 4000 3364 1 96 2691 162 66 9 chrUextra 24772507 24773142 -4231514 + SAR_DM Satellite Satellite 352 1022 -450 1 774 3320 20 0 33 chrUextra 24773242 24773661 -4230995 + Baggins1 LINE LOA 5049 5453 0 1 774 1906 122 26 0 chrUextra 24774146 24774530 -4230126 - TART_B1 LINE telomeric -8410 2244 1851 1 774 676 24 12 0 chrUextra 24774530 24774614 -4230042 + PROTOP_A DNA P 1 85 -1020 1 774 3177 16 0 0 chrUextra 24774714 24775093 -4229563 + R1_DM LINE R1 1880 2258 -3098 1 774 1905 81 0 0 chrUextra 24775089 24775350 -4229306 + R1_DM LINE R1 1312 1572 -3784 1 774 5436 13 0 0 chrUextra 24775450 24776086 -4228570 - Gypsy4_I LTR Gypsy -3106 3182 2547 1 774 26 74 0 0 chrUextra 24776347 24776401 -4228255 + AT_rich Low_complexity Low_complexity 1 54 0 1 774 359 236 70 85 chrUextra 24776434 24776633 -4228023 - HMSBEAGLE_I LTR Gypsy -6110 419 224 1 774 4951 27 6 14 chrUextra 24776923 24777558 -4227098 - TAHRE LINE telomeric -9597 866 237 1 774 5448 19 2 2 chrUextra 24777658 24778294 -4226362 + STALKER4_I LTR Gypsy 4795 5430 -1100 1 774 2463 108 11 33 chrUextra 24778396 24779030 -4225626 + DMSAT6 Satellite Satellite 1 619 -64 1 774 4925 28 2 0 chrUextra 24779200 24779766 -4224890 + PROTOP DNA P 1 567 -3913 1 774 2373 97 32 22 chrUextra 24780603 24781238 -4223418 + DMSAT6 Satellite Satellite 1 640 -64 1 774 5589 20 0 0 chrUextra 24781341 24781974 -4222682 - FW_DM LINE Jockey -1027 3665 3033 1 774 878 67 0 0 chrUextra 24782074 24782193 -4222463 + ARS406_DM Unknown Unknown 40 158 -195 1 774 2623 174 6 8 chrUextra 24782190 24782710 -4221946 - SAR_DM Satellite Satellite -558 914 396 1 774 393 142 58 80 chrUextra 24782812 24782950 -4221706 + BATUMI_I LTR Pao 635 769 -7194 1 774 2257 117 22 59 chrUextra 24782991 24783446 -4221210 + BATUMI_I LTR Pao 749 1186 -6777 1 774 2709 166 15 31 chrUextra 24783546 24784918 -4219738 - DMSAT6 Satellite Satellite -3 1349 1 1 774 1028 38 0 8 chrUextra 24785018 24785152 -4219504 + (CTTAT)n Simple_repeat Simple_repeat 1 133 0 1 774 3639 97 0 8 chrUextra 24785754 24786245 -4218411 - Gypsy12_I LTR Gypsy -3696 1850 1364 1 774 1011 125 0 0 chrUextra 24786246 24786390 -4218266 - Gypsy12_I LTR Gypsy -2590 2956 2813 1 774 2730 234 14 5 chrUextra 24786490 24787126 -4217530 - TABOR_I LTR Gypsy -1696 4640 3999 1 774 4035 2 4 7 chrUextra 24787226 24787682 -4216974 + LSU-rRNA_Dme rRNA rRNA 1337 1791 -2109 1 774 1306 0 0 0 chrUextra 24787723 24787862 -4216794 + LSU-rRNA_Dme rRNA rRNA 1788 1926 -1974 1 774 3285 63 12 8 chrUextra 24788698 24789179 -4215477 + STALKER4_I LTR Gypsy 6048 6530 0 1 774 1172 42 0 0 chrUextra 24789190 24789334 -4215322 + STALKER4_LTR LTR Gypsy 9 152 -250 1 774 2889 36 0 9 chrUextra 24789434 24789773 -4214883 + DMCR1A LINE CR1 1310 1645 -2825 1 774 2616 24 3 0 chrUextra 24789773 24790070 -4214586 - PROTOP DNA P 0 4480 4183 1 774 919 97 0 0 chrUextra 24790170 24790294 -4214362 - Gypsy12_I LTR Gypsy -766 4780 4657 1 774 1142 29 107 0 chrUextra 24790292 24790432 -4214224 - PROTOP DNA P -4325 155 1 1 774 4093 19 8 0 chrUextra 24790907 24791376 -4213280 + R1_DM LINE R1 4884 5356 0 1 774 1002 75 8 0 chrUextra 24791409 24791542 -4213114 + R1_DM LINE R1 1 134 -5222 1 774 3705 17 94 2 chrUextra 24791642 24792278 -4212378 - R1_DM LINE R1 -42 5314 4620 1 774 5002 8 0 65 chrUextra 24792378 24793013 -4211643 - DM176_I LTR Gypsy -5363 1057 464 1 774 3059 167 11 11 chrUextra 24793863 24794486 -4210170 + SAR_DM Satellite Satellite 366 988 -484 1 774 2951 179 9 11 chrUextra 24794587 24795218 -4209438 - SAR_DM Satellite Satellite -625 847 218 1 774 5365 21 0 0 chrUextra 24795322 24795931 -4208725 - R1_DM LINE R1 -2790 2566 1958 1 774 5876 0 2 3 chrUextra 24796058 24796694 -4207962 + LSU-rRNA_Dme rRNA rRNA 3155 3789 -111 1 774 3045 172 28 8 chrUextra 24796794 24797428 -4207228 - SAR_DM Satellite Satellite -500 972 326 1 774 5173 41 2 3 chrUextra 24797530 24798166 -4206490 + R1_DM LINE R1 710 1344 -4012 1 774 5574 11 3 0 chrUextra 24798266 24798902 -4205754 - DM176_I LTR Gypsy -3869 2551 1914 1 774 5501 27 0 0 chrUextra 24799002 24799638 -4205018 - R1_DM LINE R1 -2171 3185 2550 1 774 5777 3 0 2 chrUextra 24799738 24800374 -4204282 + R1_DM LINE R1 3157 3791 -1565 1 774 5511 14 0 2 chrUextra 24800474 24801110 -4203546 + STALKER4_I LTR Gypsy 2685 3319 -3211 1 774 2939 179 33 10 chrUextra 24801210 24801838 -4202818 - SAR_DM Satellite Satellite -583 889 247 1 774 250 170 0 0 chrUextra 24801799 24801846 -4202810 + ARS406_DM Unknown Unknown 1 47 -306 1 774 782 317 64 28 chrUextra 24801954 24802582 -4202074 + Gypsy5_I LTR Gypsy 3946 5066 -1222 1 774 757 11 0 33 chrUextra 24802682 24802773 -4201883 - NTS_DM Other Other -128 112 25 1 774 1350 18 0 6 chrUextra 24802825 24802990 -4201666 - NTS_DM Other Other -39 201 38 1 774 908 18 0 27 chrUextra 24802990 24803102 -4201554 - NTS_DM Other Other -107 133 25 1 774 1343 18 0 6 chrUextra 24803154 24803318 -4201338 - NTS_DM Other Other -39 201 39 1 774 5713 3 11 0 chrUextra 24803418 24804054 -4200602 + DM176_I LTR Gypsy 2937 3579 -2841 1 774 865 102 0 0 chrUextra 24804154 24804281 -4200375 - ARS406_DM Unknown Unknown -226 127 1 1 774 2843 185 10 8 chrUextra 24804185 24804790 -4199866 + SAR_DM Satellite Satellite 192 797 -675 1 774 5801 3 2 3 chrUextra 24804890 24805526 -4199130 + LSU-rRNA_Dme rRNA rRNA 1014 1648 -2252 1 774 1840 26 13 0 chrUextra 24805627 24805854 -4198802 - BATUMI_I LTR Pao -1307 6656 6427 1 774 3232 18 0 3 chrUextra 24805877 24806262 -4198394 + BATUMI_I LTR Pao 7303 7686 -277 1 774 395 250 118 100 chrUextra 24806451 24806731 -4197925 - Invader1_LTR LTR Gypsy -55 368 84 1 774 321 140 0 34 chrUextra 24806939 24806998 -4197658 + DMLTR5 LTR Gypsy 44 100 -166 1 774 4882 27 2 7 chrUextra 24807142 24807734 -4196922 - R1_DM LINE R1 -957 4399 3811 1 774 1119 88 0 0 chrUextra 24807837 24808145 -4196511 + (CATGT)n Simple_repeat Simple_repeat 1 308 0 1 774 1422 47 0 0 chrUextra 24808145 24808470 -4196186 + (TCTTG)n Simple_repeat Simple_repeat 1 325 0 1 774 1175 21 0 7 chrUextra 24809306 24809451 -4195205 - NTS_DM Other Other -59 181 38 1 774 936 9 0 27 chrUextra 24809451 24809563 -4195093 - NTS_DM Other Other -107 133 25 1 774 278 176 0 19 chrUextra 24809638 24809690 -4194966 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 774 1860 15 0 0 chrUextra 24809736 24809942 -4194714 - R2_DM LINE R2 -1319 2288 2083 1 774 339 230 10 10 chrUextra 24810042 24810143 -4194513 + XDMR_DM Unknown Unknown 260 360 0 1 774 2714 187 7 24 chrUextra 24810058 24810678 -4193978 - SAR_DM Satellite Satellite -354 1118 510 1 774 3645 57 3 124 chrUextra 24810778 24811398 -4193258 + MDG1_I LTR Gypsy 878 1422 -5174 1 774 4527 6 0 0 chrUextra 24811647 24812150 -4192506 + QUASIMODO_LTR LTR Gypsy 1 503 -155 1 774 1158 122 0 0 chrUextra 24812997 24813177 -4191479 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 774 3979 7 0 2 chrUextra 24813179 24813622 -4191034 - DM176_LTR LTR Gypsy 0 507 66 1 774 1620 13 0 0 chrUextra 24813722 24814186 -4190470 + (AGATG)n Simple_repeat Simple_repeat 1 464 0 1 774 232 30 9 116 chrUextra 24814182 24814294 -4190362 + GA-rich Low_complexity Low_complexity 1 100 0 1 774 2885 0 0 73 chrUextra 24814458 24814816 -4189840 - LSU-rRNA_Dme rRNA rRNA -3568 332 1 1 774 21 95 0 0 chrUextra 24814828 24814891 -4189765 + AT_rich Low_complexity Low_complexity 1 63 0 1 774 825 41 0 0 chrUextra 24815194 24815292 -4189364 - DM176_LTR LTR Gypsy -27 480 383 1 774 21 89 0 0 chrUextra 24815323 24815379 -4189277 + AT_rich Low_complexity Low_complexity 1 56 0 1 774 23 68 0 0 chrUextra 24815417 24815461 -4189195 + AT_rich Low_complexity Low_complexity 1 44 0 1 774 26 30 0 0 chrUextra 24815507 24815540 -4189116 + AT_rich Low_complexity Low_complexity 1 33 0 1 774 2528 181 21 22 chrUextra 24815931 24816558 -4188098 + SAR_DM Satellite Satellite 1 626 -378 1 774 3010 185 11 6 chrUextra 24816668 24817299 -4187357 - SAR_DM Satellite Satellite -593 879 246 1 774 3089 179 8 9 chrUextra 24817402 24818038 -4186618 + SAR_DM Satellite Satellite 284 918 -554 1 774 1967 254 6 14 chrUextra 24818138 24818772 -4185884 + Gypsy11_I LTR Gypsy 2757 3385 -139 1 774 1209 22 0 0 chrUextra 24818874 24819011 -4185645 + NINJA_I LTR Pao 5875 6011 0 1 774 2609 32 0 28 chrUextra 24819011 24819334 -4185322 + NINJA_LTR LTR Pao 1 314 -3 1 774 367 0 23 0 chrUextra 24819610 24819654 -4185002 - QUASIMODO_LTR LTR Gypsy -613 45 1 1 774 4901 5 10 0 chrUextra 24819654 24820246 -4184410 - QUASIMODO_I LTR Gypsy 0 6060 5463 1 774 3041 187 6 8 chrUextra 24820351 24820982 -4183674 - SAR_DM Satellite Satellite -425 1047 418 1 774 5556 25 0 0 chrUextra 24821082 24821718 -4182938 - R1_DM LINE R1 -3122 2234 1599 1 774 5449 19 8 0 chrUextra 24821833 24822454 -4182202 - DIVER2_I LTR Pao 0 4147 3522 1 774 453 19 0 0 chrUextra 24822554 24822608 -4182048 + (TTCTC)n Simple_repeat Simple_repeat 4 57 0 1 774 180 0 0 0 chrUextra 24822611 24822631 -4182025 + (AGTTG)n Simple_repeat Simple_repeat 4 23 0 1 774 1578 6 0 0 chrUextra 24822633 24822812 -4181844 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 774 1172 49 0 6 chrUextra 24822839 24823004 -4181652 + (GAGAA)n Simple_repeat Simple_repeat 5 168 0 1 774 1563 11 0 11 chrUextra 24823290 24823470 -4181186 - R2_DM LINE R2 -3427 180 3 1 774 2392 4 0 25 chrUextra 24823468 24823747 -4180909 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2310 1 774 1182 50 25 19 chrUextra 24824026 24824188 -4180468 - DMCR1A LINE CR1 -4307 163 1 1 774 2002 107 36 3 chrUextra 24824176 24824477 -4180179 - MDG1_LTR LTR Gypsy -9 433 123 1 774 383 68 17 0 chrUextra 24824489 24824548 -4180108 + (TTA)n Simple_repeat Simple_repeat 3 62 0 1 774 483 23 14 68 chrUextra 24824565 24824655 -4180001 - MDG1_I LTR Gypsy 0 6596 6523 1 774 5891 0 2 2 chrUextra 24824762 24825398 -4179258 + LSU-rRNA_Dme rRNA rRNA 2431 3066 -834 1 774 5612 6 2 5 chrUextra 24826234 24826870 -4177786 - R1_DM LINE R1 -1522 3834 3201 1 774 1032 40 0 0 chrUextra 24826971 24827096 -4177560 + ARS406_DM Unknown Unknown 65 189 -164 1 774 2175 205 92 25 chrUextra 24827005 24827604 -4177052 - SAR_DM Satellite Satellite -216 1256 618 1 774 3166 164 11 10 chrUextra 24828446 24829072 -4175584 + SAR_DM Satellite Satellite 332 958 -514 1 774 5085 19 0 0 chrUextra 24829183 24829756 -4174900 + PROTOP DNA P 1 571 -3909 1 774 464 33 0 16 chrUextra 24829752 24829814 -4174842 + PROTOP DNA P 3892 3952 -528 1 774 5871 2 0 0 chrUextra 24829914 24830550 -4174106 + FW_DM LINE Jockey 3145 3780 -912 1 774 31 0 0 0 chrUextra 24830658 24830689 -4173967 + AT_rich Low_complexity Low_complexity 1 31 0 1 774 28 48 0 0 chrUextra 24831017 24831059 -4173597 + AT_rich Low_complexity Low_complexity 1 42 0 1 774 5787 3 2 0 chrUextra 24831386 24832022 -4172634 + R1_DM LINE R1 1456 2092 -3264 1 774 1555 0 17 0 chrUextra 24832122 24832294 -4172362 + LSU-rRNA_Dme rRNA rRNA 2480 2654 -1246 1 774 3094 6 0 0 chrUextra 24832291 24832628 -4172028 + R1_DM LINE R1 5020 5356 0 1 774 1213 8 0 0 chrUextra 24832626 24832758 -4171898 + LSU-rRNA_Dme rRNA rRNA 2640 2771 -1129 1 774 5571 16 0 6 chrUextra 24832858 24833494 -4171162 - STALKER4_I LTR Gypsy -1509 5021 4390 1 774 774 0 0 0 chrUextra 24834144 24834230 -4170426 + (TTCTC)n Simple_repeat Simple_repeat 2 87 0 1 774 5430 2 0 0 chrUextra 24834330 24834966 -4169690 + LSU-rRNA_Dme rRNA rRNA 481 1116 -2784 1 774 2791 174 16 11 chrUextra 24835068 24835702 -4168954 - SAR_DM Satellite Satellite -417 1055 419 1 774 1620 0 0 0 chrUextra 24836109 24836438 -4168218 + (TTCTC)n Simple_repeat Simple_repeat 1 329 0 1 774 1559 39 77 0 chrUextra 24836538 24836745 -4167911 - PROTOP_B DNA P -930 223 1 1 774 234 291 12 29 chrUextra 24838168 24838338 -4166318 + (TAAA)n Simple_repeat Simple_repeat 2 168 0 1 774 262 191 43 43 chrUextra 24838488 24838603 -4166053 + A-rich Low_complexity Low_complexity 3 117 0 1 774 5066 11 3 0 chrUextra 24839482 24840118 -4164538 + DM176_I LTR Gypsy 1185 1822 -4598 1 774 1666 15 10 0 chrUextra 24840218 24840424 -4164232 + R1_DM LINE R1 3452 3659 -1697 1 774 3493 30 2 0 chrUextra 24840422 24840854 -4163802 + R1_DM LINE R1 4833 5265 -91 1 774 774 0 0 0 chrUextra 24840954 24841040 -4163616 + (TCTTG)n Simple_repeat Simple_repeat 4 89 0 1 774 208 200 31 0 chrUextra 24842016 24842081 -4162575 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 774 375 0 0 0 chrUextra 24842425 24842468 -4162188 - NTS_DM Other Other -197 43 1 1 774 1861 0 17 13 chrUextra 24842468 24842707 -4161949 - NTS_DM Other Other 0 240 1 1 774 1822 8 17 13 chrUextra 24842707 24842946 -4161710 - NTS_DM Other Other 0 240 1 1 774 761 0 35 26 chrUextra 24842946 24843060 -4161596 - NTS_DM Other Other 0 240 126 1 774 5378 2 0 5 chrUextra 24843160 24843795 -4160861 + R1_DM LINE R1 1653 2284 -3072 1 774 5470 2 2 0 chrUextra 24843895 24844530 -4160126 + FW_DM LINE Jockey 685 1320 -3372 1 774 4414 92 27 3 chrUextra 24844630 24845265 -4159391 + Gypsy12_I LTR Gypsy 3245 3894 -1652 1 774 652 186 7 14 chrUextra 24845559 24845701 -4158955 + HETRP_DM Satellite Satellite 1529 1669 -203 1 774 210 37 0 0 chrUextra 24845859 24845886 -4158770 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 774 491 214 0 9 chrUextra 24845886 24845999 -4158657 + HETRP_DM Satellite Satellite 1549 1660 -212 1 774 5396 13 0 0 chrUextra 24846100 24846735 -4157921 + Gypsy4_I LTR Gypsy 2618 3252 -3036 1 774 2649 182 8 8 chrUextra 24846835 24847450 -4157206 - SAR_DM Satellite Satellite -663 809 195 1 774 675 115 0 0 chrUextra 24847357 24847470 -4157186 + ARS406_DM Unknown Unknown 1 113 -240 1 774 827 0 0 0 chrUextra 24847571 24847665 -4156991 + R1_DM LINE R1 4820 4913 -443 1 774 4725 2 0 0 chrUextra 24847663 24848205 -4156451 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2114 1 774 279 54 0 0 chrUextra 24848895 24848932 -4155724 + (GGAGA)n Simple_repeat Simple_repeat 1 37 0 1 774 2891 170 8 9 chrUextra 24849040 24849675 -4154981 - SAR_DM Satellite Satellite -426 1046 413 1 774 5224 25 2 0 chrUextra 24849775 24850410 -4154246 - R1_DM LINE R1 -360 4996 4361 1 774 3273 84 9 39 chrUextra 24850511 24851044 -4153612 - Gypsy12_I LTR Gypsy -5029 517 1 1 774 509 150 10 10 chrUextra 24851044 24851145 -4153511 - Gypsy12A_LTR LTR Gypsy 0 2280 2180 1 774 621 151 28 141 chrUextra 24851245 24851422 -4153234 + TART LINE telomeric 3206 3362 -11115 1 774 2723 83 18 22 chrUextra 24851429 24851874 -4152782 + TART LINE telomeric 2777 3219 -11258 1 774 2810 160 13 7 chrUextra 24851980 24852577 -4152079 - SAR_DM Satellite Satellite -546 926 326 1 774 2883 177 6 8 chrUextra 24852719 24853350 -4151306 - SAR_DM Satellite Satellite -425 1047 418 1 774 290 276 36 77 chrUextra 24853450 24854011 -4150645 - ROVER-I_DM LTR Gypsy -5539 1045 508 1 774 2844 160 13 13 chrUextra 24854185 24854819 -4149837 - SAR_DM Satellite Satellite -507 965 332 1 774 483 0 0 0 chrUextra 24854920 24854975 -4149681 - BLOOD_LTR LTR Gypsy -344 55 1 1 774 3809 26 143 7 chrUextra 24854975 24855555 -4149101 - BLOOD_I LTR Gypsy 0 6613 5955 1 774 4527 2 0 2 chrUextra 24855658 24856181 -4148475 - LSU-rRNA_Dme rRNA rRNA -1591 2309 1788 1 774 525 0 0 15 chrUextra 24856225 24856290 -4148366 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1725 1 774 2963 157 13 10 chrUextra 24856398 24857022 -4147634 + SAR_DM Satellite Satellite 369 994 -478 1 774 4942 40 2 6 chrUextra 24857125 24857760 -4146896 - IDEFIX_I LTR Gypsy -3336 2292 1661 1 774 1488 47 0 2 chrUextra 24857863 24858485 -4146171 + (CATCT)n Simple_repeat Simple_repeat 1 621 0 1 774 2901 171 8 9 chrUextra 24858597 24859228 -4145428 + SAR_DM Satellite Satellite 293 922 -550 1 774 1365 0 21 16 chrUextra 24859330 24859516 -4145140 + NTS_DM Other Other 54 240 0 1 774 1847 4 17 13 chrUextra 24859516 24859755 -4144901 + NTS_DM Other Other 1 240 0 1 774 1271 6 0 24 chrUextra 24859755 24859921 -4144735 + NTS_DM Other Other 1 162 -78 1 774 5432 2 0 2 chrUextra 24860065 24860700 -4143956 + R1_DM LINE R1 1526 2159 -3197 1 774 5435 3 8 2 chrUextra 24860802 24861435 -4143221 - Gypsy4_I LTR Gypsy -3035 3253 2617 1 774 1147 146 39 96 chrUextra 24861553 24861834 -4142822 + TART LINE telomeric 3098 3362 -11115 1 774 2066 59 15 9 chrUextra 24861841 24862168 -4142488 + TART LINE telomeric 2777 3105 -11372 1 774 819 0 0 0 chrUextra 24862814 24862905 -4141751 + (CACAA)n Simple_repeat Simple_repeat 5 95 0 1 774 5093 5 17 9 chrUextra 24863005 24863640 -4141016 - MDG1_I LTR Gypsy -5656 940 301 1 774 2924 217 34 14 chrUextra 24863740 24865105 -4139551 + SAR_DM Satellite Satellite 1 1391 -501 1 774 2289 61 5 205 chrUextra 24865210 24865845 -4138811 - BATUMI_I LTR Pao -7159 804 297 1 774 1502 201 67 13 chrUextra 24865949 24866370 -4138286 - SAR_DM Satellite Satellite -721 665 38 1 774 1250 80 0 0 chrUextra 24866370 24866557 -4138099 + ARS406_DM Unknown Unknown 1 187 -166 1 774 1502 201 67 13 chrUextra 24866557 24866580 -4138076 - SAR_DM Satellite Satellite -721 37 1 1 774 2572 183 8 21 chrUextra 24867419 24868050 -4136606 + SAR_DM Satellite Satellite 496 1118 -354 1 774 4739 2 3 73 chrUextra 24868151 24868785 -4135871 + LSU-rRNA_Dme rRNA rRNA 1461 2050 -1850 1 774 2702 181 11 8 chrUextra 24868887 24869511 -4135145 + SAR_DM Satellite Satellite 278 903 -569 1 774 5494 0 2 3 chrUextra 24869620 24870255 -4134401 - LSU-rRNA_Dme rRNA rRNA -268 3632 2999 1 774 4087 101 71 6 chrUextra 24870355 24870990 -4133666 - Gypsy12_I LTR Gypsy -3531 2015 1340 1 774 47 0 0 0 chrUextra 24871485 24871532 -4133124 + AT_rich Low_complexity Low_complexity 1 47 0 1 774 4966 41 2 2 chrUextra 24871825 24872460 -4132196 + R1_DM LINE R1 1010 1644 -3712 1 774 4744 38 2 14 chrUextra 24872560 24873195 -4131461 + BATUMI_I LTR Pao 2707 3333 -4630 1 774 2745 179 7 5 chrUextra 24873299 24873905 -4130751 - SAR_DM Satellite Satellite -620 852 246 1 774 362 123 0 0 chrUextra 24873865 24873930 -4130726 + ARS406_DM Unknown Unknown 1 65 -288 1 774 1116 8 0 0 chrUextra 24874030 24874159 -4130497 + LSU-rRNA_Dme rRNA rRNA 2450 2578 -1322 1 774 4330 0 0 0 chrUextra 24874162 24874665 -4129991 + R2_DM LINE R2 382 884 -2723 1 774 399 0 62 47 chrUextra 24874765 24874829 -4129827 + NTS_DM Other Other 176 240 0 1 774 1734 21 17 17 chrUextra 24874829 24875069 -4129587 + NTS_DM Other Other 1 240 0 1 774 1828 8 17 13 chrUextra 24875069 24875308 -4129348 + NTS_DM Other Other 1 240 0 1 774 804 0 0 0 chrUextra 24875308 24875400 -4129256 + NTS_DM Other Other 1 92 -148 1 774 1437 81 3 0 chrUextra 24875517 24875876 -4128780 + (CTATT)n Simple_repeat Simple_repeat 1 360 0 1 774 240 130 0 0 chrUextra 24875907 24875953 -4128703 + (TTATA)n Simple_repeat Simple_repeat 3 48 0 1 774 1118 51 17 22 chrUextra 24875953 24876133 -4128523 + (CTATT)n Simple_repeat Simple_repeat 2 180 0 1 774 1091 116 0 17 chrUextra 24876293 24876527 -4128129 + (CTATT)n Simple_repeat Simple_repeat 1 229 0 1 774 1437 21 0 6 chrUextra 24876529 24876870 -4127786 + (TTCTC)n Simple_repeat Simple_repeat 1 338 0 1 774 402 224 0 30 chrUextra 24876970 24877071 -4127585 + TIRANT_I LTR Gypsy 7595 7692 0 1 774 770 11 0 0 chrUextra 24877514 24877605 -4127051 + Copia2_I LTR Copia 1871 1961 -2201 1 774 2072 91 168 34 chrUextra 24879212 24879599 -4125057 - TAHRE LINE telomeric -12 10451 10013 1 774 1090 105 209 0 chrUextra 24879599 24879809 -4124847 - TART LINE telomeric -6638 7839 7586 1 774 1550 10 19 14 chrUextra 24879910 24880118 -4124538 + NTS_DM Other Other 32 240 0 1 774 1831 8 17 13 chrUextra 24880118 24880357 -4124299 + NTS_DM Other Other 1 240 0 1 774 1290 6 0 18 chrUextra 24880357 24880522 -4124134 + NTS_DM Other Other 1 162 -78 1 774 522 0 0 0 chrUextra 24880645 24880703 -4123953 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1 774 4066 0 0 0 chrUextra 24881380 24881843 -4122813 + R2_DM LINE R2 3145 3607 0 1 774 651 26 0 0 chrUextra 24881842 24881919 -4122737 + LSU-rRNA_Dme rRNA rRNA 2578 2654 -1246 1 774 572 0 0 0 chrUextra 24881948 24882015 -4122641 + R1_DM LINE R1 1 67 -5289 1 774 2065 0 0 0 chrUextra 24882115 24882349 -4122307 + SSU-rRNA_Dme rRNA rRNA 1762 1995 0 1 774 21 89 0 0 chrUextra 24882368 24882424 -4122232 + AT_rich Low_complexity Low_complexity 1 56 0 1 774 5538 2 0 0 chrUextra 24882852 24883485 -4121171 - LSU-rRNA_Dme rRNA rRNA -1181 2719 2087 1 774 5139 28 0 0 chrUextra 24883585 24884220 -4120436 - R1_DM LINE R1 -2458 2898 2264 1 774 2284 86 19 55 chrUextra 24884320 24884941 -4119715 - DMSAT6 Satellite Satellite -79 598 1 1 774 5472 2 0 0 chrUextra 24885055 24885690 -4118966 - ROO_I LTR Pao -2616 5640 5006 1 774 5441 9 2 0 chrUextra 24885790 24886425 -4118231 + Gypsy6_I LTR Gypsy 2386 3021 -3991 1 774 850 52 0 0 chrUextra 24886525 24886640 -4118016 + ARS406_DM Unknown Unknown 75 189 -164 1 774 2101 184 99 29 chrUextra 24886543 24887160 -4117496 - SAR_DM Satellite Satellite -208 1264 605 1 774 1543 96 4 7 chrUextra 24887271 24887545 -4117111 - S_DM DNA Tc1 -1463 273 1 1 774 1034 15 0 8 chrUextra 24887545 24887672 -4116984 - CIRCE LINE Composite -1861 4495 4370 1 774 1022 100 49 58 chrUextra 24887672 24887895 -4116761 - ROVER-LTR_DM LTR Gypsy 0 367 147 1 774 2251 112 20 28 chrUextra 24887995 24888608 -4116048 - DMSAT6 Satellite Satellite -73 607 1 1 774 433 216 9 0 chrUextra 24888735 24888846 -4115810 - SAR_DM Satellite Satellite -729 743 632 1 774 4387 4 0 0 chrUextra 24888853 24889365 -4115291 + FW_DM LINE Jockey 1 512 -4180 1 774 5001 2 0 0 chrUextra 24889531 24890100 -4114556 + SSU-rRNA_Dme rRNA rRNA 1 569 -1426 1 774 3743 244 17 43 chrUextra 24890941 24892171 -4112485 + SAR_DM Satellite Satellite 1 1197 -203 1 774 541 145 77 0 chrUextra 24892186 24892303 -4112353 + SAR_DM Satellite Satellite 547 672 -800 1 774 5452 2 0 2 chrUextra 24892405 24893040 -4111616 + R1_DM LINE R1 1431 2064 -3292 1 774 5197 24 2 0 chrUextra 24893875 24894510 -4110146 + R1_DM LINE R1 2312 2947 -2409 1 774 5524 5 0 0 chrUextra 24894610 24895245 -4109411 - Gypsy4_I LTR Gypsy -5025 1263 629 1 774 21 89 0 0 chrUextra 24895746 24895802 -4108854 + AT_rich Low_complexity Low_complexity 1 56 0 1 774 1395 0 0 0 chrUextra 24895821 24895980 -4108676 - SSU-rRNA_Dme rRNA rRNA 0 1995 1837 1 774 5198 18 2 14 chrUextra 24896080 24896715 -4107941 - Gypsy12_I LTR Gypsy -400 5146 4520 1 774 2491 95 18 13 chrUextra 24896841 24897450 -4107206 - DMSAT6 Satellite Satellite -4 611 1 1 774 938 216 110 56 chrUextra 24897593 24897985 -4106671 + HETA LINE telomeric 5311 5723 -358 1 774 303 81 113 0 chrUextra 24898009 24898071 -4106585 + TART LINE telomeric 10421 10489 -3988 1 774 34 24 0 0 chrUextra 24898084 24898125 -4106531 + AT_rich Low_complexity Low_complexity 1 41 0 1 774 3941 15 0 4 chrUextra 24898295 24898775 -4105881 - DMRT1B LINE R1 -2803 2380 1903 1 774 678 0 106 0 chrUextra 24898776 24898918 -4105738 + (GTCTG)n Simple_repeat Simple_repeat 1 157 0 1 774 217 262 15 15 chrUextra 24899020 24899086 -4105570 + T-rich Low_complexity Low_complexity 2 67 0 1 774 301 160 49 25 chrUextra 24899089 24899211 -4105445 + CT-rich Low_complexity Low_complexity 4 128 0 1 774 477 142 64 0 chrUextra 24899242 24899383 -4105273 + CT-rich Low_complexity Low_complexity 5 154 0 1 774 540 138 54 8 chrUextra 24899412 24899655 -4105001 + GA-rich Low_complexity Low_complexity 1 254 0 1 774 1234 67 28 16 chrUextra 24900208 24900390 -4104266 + Invader1_I LTR Gypsy 2718 2901 -285 1 774 1566 0 0 0 chrUextra 24900490 24900664 -4103992 + (CACAA)n Simple_repeat Simple_repeat 3 176 0 1 774 34 24 0 0 chrUextra 24901348 24901389 -4103267 + AT_rich Low_complexity Low_complexity 1 41 0 1 774 21 95 0 0 chrUextra 24901602 24901665 -4102991 + AT_rich Low_complexity Low_complexity 1 63 0 1 774 1515 0 0 11 chrUextra 24901677 24901860 -4102796 + LSU-rRNA_Dme rRNA rRNA 1 181 -3719 1 774 1121 21 7 0 chrUextra 24901960 24902101 -4102555 - TRANSIB1 DNA Transib -64 2950 2809 1 774 3906 20 42 0 chrUextra 24902099 24902595 -4102061 - TRANSIB1 DNA Transib -1347 1667 1151 1 774 3563 0 0 12 chrUextra 24902695 24903109 -4101547 + HOBO DNA hAT 2608 3016 0 1 96 5529 2 2 0 chrUextra 24903430 24904065 -4100591 + SSU-rRNA_Dme rRNA rRNA 1335 1970 -25 1 775 551 12 0 0 chrUextra 24904165 24904247 -4100409 + DOC LINE Jockey 4644 4725 0 1 775 375 130 0 0 chrUextra 24904251 24904320 -4100336 - ARS406_DM Unknown Unknown -284 69 1 1 775 2257 197 6 4 chrUextra 24904258 24904798 -4099858 + SAR_DM Satellite Satellite 224 764 -708 1 775 315 43 22 0 chrUextra 24904900 24904946 -4099710 + ARS406_DM Unknown Unknown 140 186 -167 1 775 2658 170 36 7 chrUextra 24904906 24905522 -4099134 - SAR_DM Satellite Satellite -615 857 224 1 775 505 80 0 0 chrUextra 24905460 24905535 -4099121 + ARS406_DM Unknown Unknown 1 75 -278 1 775 1923 28 28 0 chrUextra 24905635 24905884 -4098772 + PROTOP DNA P 831 1086 -3394 1 775 2743 12 0 0 chrUextra 24905895 24906217 -4098439 + PROTOP DNA P 4159 4480 0 1 775 231 0 0 0 chrUextra 24906370 24906397 -4098259 - NTS_DM Other Other -207 33 7 1 775 1850 4 17 13 chrUextra 24906403 24906642 -4098014 - NTS_DM Other Other 0 240 1 1 775 1734 21 17 17 chrUextra 24906642 24906882 -4097774 - NTS_DM Other Other 0 240 1 1 775 692 25 32 41 chrUextra 24906882 24907005 -4097651 - NTS_DM Other Other 0 240 119 1 775 4704 19 5 3 chrUextra 24907105 24907730 -4096926 + MDG1_I LTR Gypsy 5699 6324 -272 1 775 1629 55 37 25 chrUextra 24909702 24909943 -4094713 + BATUMI_LTR LTR Pao 1 244 -28 1 775 1461 12 0 0 chrUextra 24910045 24910212 -4094444 + (GAGAA)n Simple_repeat Simple_repeat 4 170 0 1 775 4624 43 30 2 chrUextra 24911541 24912150 -4092506 + R1_DM LINE R1 1103 1728 -3628 1 775 5082 2 11 3 chrUextra 24912250 24912885 -4091771 + MAX_I LTR Pao 614 1253 -6661 1 775 5311 2 17 3 chrUextra 24912985 24913620 -4091036 - MAX_I LTR Pao -6222 1692 1049 1 775 5363 3 2 0 chrUextra 24913720 24914354 -4090302 + R1_DM LINE R1 2517 3151 -2205 1 775 5181 28 0 0 chrUextra 24914454 24915088 -4089568 + R1_DM LINE R1 2918 3551 -1805 1 775 1302 71 5 5 chrUextra 24915188 24915373 -4089283 - R1_DM LINE R1 -5171 185 1 1 775 954 26 0 0 chrUextra 24915406 24915520 -4089136 - R1_DM LINE R1 0 5356 5243 1 775 1653 19 5 0 chrUextra 24915517 24915722 -4088934 - R1_DM LINE R1 -290 5066 4861 1 775 661 64 11 0 chrUextra 24915724 24915818 -4088838 - R1_DM LINE R1 -5114 242 148 1 775 21 89 0 0 chrUextra 24915999 24916055 -4088601 + AT_rich Low_complexity Low_complexity 1 56 0 1 775 4157 0 4 2 chrUextra 24916074 24916556 -4088100 - SSU-rRNA_Dme rRNA rRNA 0 1995 1513 1 775 2447 89 23 16 chrUextra 24916682 24917289 -4087367 + DMSAT6 Satellite Satellite 1 611 -3 1 775 3311 66 4 4 chrUextra 24917393 24917851 -4086805 - R1_DM LINE R1 -4898 458 1 1 775 883 53 0 9 chrUextra 24917884 24917999 -4086657 - R1_DM LINE R1 0 5356 5243 1 775 933 9 0 0 chrUextra 24918858 24918964 -4085692 + (GAGAA)n Simple_repeat Simple_repeat 2 107 0 1 775 2625 158 60 25 chrUextra 24919627 24920226 -4084430 - HETA LINE telomeric -694 5387 4768 1 775 2977 173 6 6 chrUextra 24920326 24920960 -4083696 - SAR_DM Satellite Satellite -435 1037 404 1 775 5079 11 19 2 chrUextra 24921060 24921694 -4082962 + Invader2_I LTR Gypsy 130 774 -3818 1 775 2734 182 8 8 chrUextra 24922528 24923160 -4081496 - SAR_DM Satellite Satellite -629 843 212 1 775 4589 74 13 13 chrUextra 24923262 24923892 -4080764 + Gypsy12_I LTR Gypsy 4289 4918 -628 1 775 4910 38 2 11 chrUextra 24923996 24924630 -4080026 - BATUMI_I LTR Pao -2526 5437 4810 1 775 775 103 0 0 chrUextra 24924730 24924856 -4079800 - ARS406_DM Unknown Unknown -227 126 1 1 775 2552 186 10 10 chrUextra 24924760 24925364 -4079292 + SAR_DM Satellite Satellite 192 795 -677 1 775 2740 177 13 8 chrUextra 24926201 24926832 -4077824 - SAR_DM Satellite Satellite -615 857 224 1 775 717 105 9 0 chrUextra 24926934 24927048 -4077608 + ARS406_DM Unknown Unknown 73 187 -166 1 775 2903 245 15 36 chrUextra 24926954 24928241 -4076415 - SAR_DM Satellite Satellite -208 1260 1 1 775 250 100 0 0 chrUextra 24928260 24928300 -4076356 + ARS406_DM Unknown Unknown 75 114 -239 1 775 1133 31 56 0 chrUextra 24928400 24928561 -4076095 + Invader3_I LTR Gypsy 4718 4887 -1 1 775 1750 38 38 4 chrUextra 24928584 24928821 -4075835 + Invader3_LTR LTR Gypsy 54 298 0 1 775 2663 181 15 5 chrUextra 24929154 24929755 -4074901 - SAR_DM Satellite Satellite -642 830 224 1 775 427 133 0 0 chrUextra 24929693 24929768 -4074888 + ARS406_DM Unknown Unknown 1 75 -278 1 775 4044 43 99 0 chrUextra 24929879 24930463 -4074193 + DOC2_DM LINE Jockey 261 902 -3891 1 775 1816 176 8 6 chrUextra 24930602 24931236 -4073420 + SAR_DM Satellite Satellite 1 634 -542 1 775 5302 6 2 2 chrUextra 24931336 24931970 -4072686 + DMRT1B LINE R1 3849 4482 -701 1 775 2150 211 46 11 chrUextra 24932076 24932704 -4071952 - SAR_DM Satellite Satellite -416 1056 407 1 775 5520 2 2 0 chrUextra 24932804 24933438 -4071218 + SSU-rRNA_Dme rRNA rRNA 1325 1959 -36 1 775 1886 9 0 0 chrUextra 24933538 24933771 -4070885 + BARI_DM DNA Tc1 1257 1489 -239 1 775 3570 0 0 0 chrUextra 24933759 24934172 -4070484 + BARI_DM DNA Tc1 94 506 -1222 1 775 767 0 0 0 chrUextra 24934272 24934367 -4070289 + PROTOP_A DNA P 372 466 -639 1 775 4415 19 0 2 chrUextra 24934367 24934906 -4069750 - PROTOP DNA P 0 4480 3943 1 775 4757 2 5 7 chrUextra 24935006 24935578 -4069078 + LSU-rRNA_Dme rRNA rRNA 1218 1788 -2112 1 775 3420 52 8 2 chrUextra 24935742 24936243 -4068413 + MDG1_I LTR Gypsy 5794 6297 -299 1 775 278 148 30 69 chrUextra 24936243 24936374 -4068282 + MDG1_I LTR Gypsy 6440 6565 -31 1 775 3918 23 0 0 chrUextra 24936474 24936947 -4067709 + R1_DM LINE R1 4884 5356 0 1 775 861 86 8 0 chrUextra 24936980 24937108 -4067548 + R1_DM LINE R1 1 129 -5227 1 775 2392 192 19 7 chrUextra 24937228 24937842 -4066814 + SAR_DM Satellite Satellite 326 947 -525 1 775 1301 6 0 18 chrUextra 24938007 24938172 -4066484 - NTS_DM Other Other -78 162 1 1 775 1829 8 17 13 chrUextra 24938172 24938411 -4066245 - NTS_DM Other Other 0 240 1 1 775 1148 6 24 18 chrUextra 24938411 24938576 -4066080 - NTS_DM Other Other 0 240 75 1 775 40 21 0 0 chrUextra 24938703 24938750 -4065906 + AT_rich Low_complexity Low_complexity 1 47 0 1 775 2759 180 11 9 chrUextra 24939410 24940044 -4064612 + SAR_DM Satellite Satellite 410 1044 -428 1 775 1241 24 0 6 chrUextra 24940144 24940309 -4064347 - NTS_DM Other Other -39 201 38 1 775 870 9 0 27 chrUextra 24940309 24940421 -4064235 - NTS_DM Other Other -107 133 25 1 775 22 56 0 0 chrUextra 24940447 24940483 -4064173 + AT_rich Low_complexity Low_complexity 1 36 0 1 775 255 125 0 0 chrUextra 24940496 24940536 -4064120 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24940579 24940619 -4064037 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24940671 24940711 -4063945 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 3338 141 49 3 chrUextra 24940878 24941511 -4063145 + IDEFIX_I LTR Gypsy 3144 3805 -1823 1 775 2716 173 11 11 chrUextra 24941612 24942242 -4062414 + SAR_DM Satellite Satellite 447 1076 -396 1 775 4272 107 8 0 chrUextra 24942346 24942980 -4061676 + Gypsy12_I LTR Gypsy 3614 4252 -1294 1 775 339 224 106 0 chrUextra 24943081 24943242 -4061414 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 775 333 208 107 0 chrUextra 24943204 24943363 -4061293 + (AATAG)n Simple_repeat Simple_repeat 5 180 0 1 775 2792 155 29 21 chrUextra 24943814 24944394 -4060262 + TAHRE LINE telomeric 9868 10452 -11 1 775 363 74 0 18 chrUextra 24944393 24944448 -4060208 + HETA LINE telomeric 190 243 -5838 1 775 2888 166 9 11 chrUextra 24944553 24945182 -4059474 - SAR_DM Satellite Satellite -425 1047 420 1 775 1029 32 0 0 chrUextra 24945282 24945407 -4059249 + (TATAA)n Simple_repeat Simple_repeat 1 125 0 1 775 3693 0 0 2 chrUextra 24945407 24945831 -4058825 - ROO_LTR LTR Pao -5 423 1 1 775 698 0 12 0 chrUextra 24945831 24945916 -4058740 - ROO_I LTR Pao 0 8256 8171 1 775 624 39 0 19 chrUextra 24946016 24946120 -4058536 + NTS_DM Other Other 100 201 -39 1 775 815 37 0 27 chrUextra 24946173 24946285 -4058371 + NTS_DM Other Other 25 133 -107 1 775 1252 18 0 6 chrUextra 24946285 24946450 -4058206 + NTS_DM Other Other 38 201 -39 1 775 870 9 0 27 chrUextra 24946502 24946614 -4058042 + NTS_DM Other Other 25 133 -107 1 775 318 0 0 0 chrUextra 24946614 24946650 -4058006 + NTS_DM Other Other 38 73 -167 1 775 5542 2 0 0 chrUextra 24946750 24947384 -4057272 - LSU-rRNA_Dme rRNA rRNA -1053 2847 2214 1 775 1411 22 0 6 chrUextra 24947484 24947666 -4056990 - NTS_DM Other Other -59 181 1 1 775 1762 17 17 17 chrUextra 24947666 24947906 -4056750 - NTS_DM Other Other 0 240 1 1 775 1444 34 19 19 chrUextra 24947906 24948118 -4056538 - NTS_DM Other Other 0 240 29 1 775 5256 10 0 9 chrUextra 24948218 24948852 -4055804 + FW_DM LINE Jockey 1720 2347 -2345 1 775 1257 52 6 4 chrUextra 24948952 24949141 -4055515 + TART LINE telomeric 10293 10663 -3814 1 775 751 162 151 26 chrUextra 24949131 24949161 -4055495 + HETA LINE telomeric 275 306 -5775 1 775 220 27 54 0 chrUextra 24949161 24949198 -4055458 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 1 775 1009 158 41 79 chrUextra 24949198 24949581 -4055075 + HETA LINE telomeric 19 615 -5466 1 775 2586 170 55 14 chrUextra 24949686 24950320 -4054336 + SAR_DM Satellite Satellite 346 1005 -467 1 775 870 9 0 27 chrUextra 24950423 24950535 -4054121 - NTS_DM Other Other -107 133 25 1 775 22 56 0 0 chrUextra 24950561 24950597 -4054059 + AT_rich Low_complexity Low_complexity 1 36 0 1 775 225 125 0 24 chrUextra 24950610 24950651 -4054005 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24950694 24950734 -4053922 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24950786 24950826 -4053830 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24950878 24950918 -4053738 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 22 56 0 0 chrUextra 24950923 24950959 -4053697 + AT_rich Low_complexity Low_complexity 1 36 0 1 775 1882 167 76 25 chrUextra 24951157 24951786 -4052870 - SAR_DM Satellite Satellite -658 660 1 1 775 5406 2 0 0 chrUextra 24951888 24952522 -4052134 - ROO_I LTR Pao -2800 5456 4823 1 775 5322 5 0 0 chrUextra 24952639 24953253 -4051403 - STALKER4_I LTR Gypsy -2112 4418 3805 1 775 5384 14 0 0 chrUextra 24953356 24953990 -4050666 - DMRT1A LINE R1 -1098 4085 3452 1 775 4988 24 3 16 chrUextra 24954090 24954724 -4049932 + BATUMI_I LTR Pao 1166 1791 -6172 1 775 5154 13 0 2 chrUextra 24954824 24955441 -4049215 + R1_DM LINE R1 4741 5356 0 1 775 1422 172 19 8 chrUextra 24955558 24956191 -4048465 + SAR_DM Satellite Satellite 1 640 -569 1 775 5064 20 19 0 chrUextra 24956292 24956926 -4047730 + R1_DM LINE R1 134 779 -4577 1 775 2166 127 46 15 chrUextra 24957050 24957660 -4046996 - DMSAT6 Satellite Satellite 0 628 1 1 775 375 0 0 0 chrUextra 24957760 24957803 -4046853 - NTS_DM Other Other -197 43 1 1 775 1831 0 17 17 chrUextra 24957803 24958043 -4046613 - NTS_DM Other Other 0 240 1 1 775 1843 4 17 13 chrUextra 24958043 24958282 -4046374 - NTS_DM Other Other 0 240 1 1 775 748 0 36 27 chrUextra 24958282 24958394 -4046262 - NTS_DM Other Other 0 240 128 1 775 4389 9 55 0 chrUextra 24958494 24959128 -4045528 + STALKER4_I LTR Gypsy 1274 1942 -4588 1 775 3156 0 3 3 chrUextra 24959228 24959593 -4045063 + SSU-rRNA_Dme rRNA rRNA 1631 1995 0 1 775 21 89 0 0 chrUextra 24959612 24959668 -4044988 + AT_rich Low_complexity Low_complexity 1 56 0 1 775 2806 169 13 14 chrUextra 24959962 24960593 -4044063 + SAR_DM Satellite Satellite 241 870 -602 1 775 5395 2 2 5 chrUextra 24960696 24961330 -4043326 + SSU-rRNA_Dme rRNA rRNA 828 1459 -536 1 775 3434 7 238 0 chrUextra 24961430 24961980 -4042676 + MDG1_I LTR Gypsy 5929 6799 -98 1 775 423 100 0 0 chrUextra 24961984 24962054 -4042602 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 775 2672 0 6 3 chrUextra 24962164 24962483 -4042173 + LSU-rRNA_Dme rRNA rRNA 1469 1788 -2112 1 775 2342 0 0 4 chrUextra 24962527 24962798 -4041858 + LSU-rRNA_Dme rRNA rRNA 1788 2057 -1843 1 775 2800 172 11 9 chrUextra 24962898 24963532 -4041124 + SAR_DM Satellite Satellite 347 981 -491 1 775 5434 0 3 5 chrUextra 24963632 24964266 -4040390 - LSU-rRNA_Dme rRNA rRNA -864 3036 2404 1 775 5268 17 3 0 chrUextra 24964366 24965000 -4039656 + R1_DM LINE R1 4361 4996 -360 1 775 1576 180 44 6 chrUextra 24965100 24965463 -4039193 - HETA LINE telomeric -1214 4867 4491 1 775 860 149 59 43 chrUextra 24965481 24965734 -4038922 - TART LINE telomeric -4887 9590 9334 1 775 2405 80 22 69 chrUextra 24965834 24966468 -4038188 + DMSAT6 Satellite Satellite 1 604 -97 1 775 389 21 0 0 chrUextra 24966569 24966616 -4038040 + FW_DM LINE Jockey 2781 2827 -1865 1 775 396 20 0 0 chrUextra 24966615 24966664 -4037992 + FW_DM LINE Jockey 2992 3040 -1652 1 775 955 9 0 0 chrUextra 24966660 24966772 -4037884 + FW_DM LINE Jockey 3226 3337 -1355 1 775 3500 25 0 0 chrUextra 24966770 24967202 -4037454 + FW_DM LINE Jockey 142 573 -4119 1 775 3210 53 25 35 chrUextra 24967302 24967936 -4036720 - DM176_I LTR Gypsy -5533 887 221 1 775 2483 196 7 7 chrUextra 24968036 24968643 -4036013 + SAR_DM Satellite Satellite 469 1075 -397 1 775 5426 2 0 0 chrUextra 24968770 24969404 -4035252 + LSU-rRNA_Dme rRNA rRNA 498 1131 -2769 1 775 2983 161 11 9 chrUextra 24970238 24970872 -4033784 - SAR_DM Satellite Satellite -436 1036 402 1 775 3898 48 2 2 chrUextra 24970972 24971473 -4033183 - Baggins1 LINE LOA -162 5291 4791 1 775 5109 16 2 8 chrUextra 24971706 24972340 -4032316 + R1_DM LINE R1 3250 3879 -1477 1 775 2911 172 8 6 chrUextra 24973174 24973807 -4030849 - SAR_DM Satellite Satellite -487 985 352 1 775 34 24 0 0 chrUextra 24974098 24974139 -4030517 + AT_rich Low_complexity Low_complexity 1 41 0 1 775 5351 11 0 0 chrUextra 24974642 24975276 -4029380 - FW_DM LINE Jockey -104 4588 3955 1 775 1369 0 0 6 chrUextra 24975376 24975538 -4029118 - LSU-rRNA_Dme rRNA rRNA -3739 161 1 1 775 21 95 0 0 chrUextra 24975550 24975613 -4029043 + AT_rich Low_complexity Low_complexity 1 63 0 1 775 34 24 0 0 chrUextra 24975826 24975867 -4028789 + AT_rich Low_complexity Low_complexity 1 41 0 1 775 3835 38 68 0 chrUextra 24976139 24976737 -4027919 + DMCR1A LINE CR1 1722 2360 -2110 1 775 1469 121 57 3 chrUextra 24977104 24977386 -4027270 - DNAREP1_DM LINE Penelope -297 297 1 1 775 300 118 108 81 chrUextra 24978312 24978386 -4026270 - Gypsy12_LTR LTR Gypsy -2260 76 1 1 775 3936 71 86 2 chrUextra 24978385 24978946 -4025710 - Gypsy12_I LTR Gypsy 0 5546 4939 1 775 2344 206 40 5 chrUextra 24979046 24979669 -4024987 + SAR_DM Satellite Satellite 412 1056 -416 1 775 51 31 0 0 chrUextra 24980883 24980948 -4023708 + AT_rich Low_complexity Low_complexity 1 65 0 1 775 5538 2 0 2 chrUextra 24981248 24981882 -4022774 + SSU-rRNA_Dme rRNA rRNA 105 737 -1258 1 775 5326 14 0 0 chrUextra 24981982 24982616 -4022040 + FW_DM LINE Jockey 506 1139 -3553 1 775 1389 39 0 3 chrUextra 24982716 24983109 -4021547 + (AATAG)n Simple_repeat Simple_repeat 1 391 0 1 775 1488 18 0 0 chrUextra 24983120 24983350 -4021306 + (AATAG)n Simple_repeat Simple_repeat 1 230 0 1 775 5298 13 2 0 chrUextra 24983450 24984084 -4020572 + Invader2_I LTR Gypsy 937 1571 -3021 1 775 527 49 25 0 chrUextra 24984184 24984265 -4020391 - Copia2_I LTR Copia -1693 2469 2387 1 775 4817 9 0 0 chrUextra 24984259 24984818 -4019838 - Copia2_I LTR Copia -1902 2260 1702 1 775 1620 0 0 0 chrUextra 24985145 24985552 -4019104 + (TTCTC)n Simple_repeat Simple_repeat 1 407 0 1 775 3546 27 5 0 chrUextra 24986386 24986828 -4017828 + R1_DM LINE R1 4623 5066 -290 1 775 897 53 0 0 chrUextra 24986825 24986939 -4017717 + R1_DM LINE R1 5243 5356 0 1 775 342 83 0 0 chrUextra 24986972 24987020 -4017636 + R1_DM LINE R1 1 48 -5308 1 775 4855 20 109 0 chrUextra 24987121 24987754 -4016902 - R1_DM LINE R1 -2133 3223 2522 1 775 5016 28 41 2 chrUextra 24987854 24988488 -4016168 + R1_DM LINE R1 4089 4747 -609 1 775 2864 171 11 6 chrUextra 24988588 24989219 -4015437 - SAR_DM Satellite Satellite -487 985 352 1 775 2887 163 11 9 chrUextra 24989322 24989955 -4014701 + SAR_DM Satellite Satellite 346 979 -493 1 775 396 0 0 0 chrUextra 24990056 24990100 -4014556 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 1 775 4010 95 8 5 chrUextra 24990790 24991423 -4013233 + S_DM DNA Tc1 1024 1658 -78 1 775 5449 2 0 0 chrUextra 24991524 24992157 -4012499 - DOC LINE Jockey -1680 3045 2413 1 775 2247 183 58 15 chrUextra 24992257 24992861 -4011795 - SAR_DM Satellite Satellite -663 809 180 1 775 877 82 0 0 chrUextra 24992755 24992890 -4011766 + ARS406_DM Unknown Unknown 1 135 -218 1 775 2432 142 27 111 chrUextra 24992991 24993623 -4011033 - Gypsy12A_LTR LTR Gypsy -40 2240 1662 1 775 5009 16 2 6 chrUextra 24993723 24994355 -4010301 + IDEFIX_I LTR Gypsy 2739 3367 -2261 1 775 648 36 0 0 chrUextra 24994456 24994539 -4010117 + (TTCTC)n Simple_repeat Simple_repeat 4 86 0 1 775 2528 0 10 0 chrUextra 24995189 24995489 -4009167 - R1_DM LINE R1 -5053 303 1 1 775 2647 3 0 0 chrUextra 24995519 24995822 -4008834 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2352 1 775 5386 3 0 0 chrUextra 24995922 24996555 -4008101 - ROO_I LTR Pao -928 7328 6696 1 775 3111 16 0 0 chrUextra 24996919 24997288 -4007368 + PROTOP_A DNA P 1 369 -736 1 775 456 71 200 12 chrUextra 24997388 24997470 -4007186 - BATUMI_I LTR Pao -864 7099 7002 1 775 3970 64 0 6 chrUextra 24997470 24998019 -4006637 - BATUMI_I LTR Pao 0 7963 7418 1 775 429 168 1 1 chrUextra 24998126 24998232 -4006424 - TART LINE telomeric -5435 9042 8952 1 775 591 298 39 28 chrUextra 24998979 24999471 -4005185 + Gypsy5_I LTR Gypsy 3946 4388 -2121 1 775 3602 0 0 0 chrUextra 24999587 25000000 -4004656 + LSU-rRNA_Dme rRNA rRNA 2592 3004 -896 1 775 1912 5 0 0 chrUextra 25000000 25000220 -4004436 + LSU-rRNA_Dme rRNA rRNA 3005 3224 -676 1 775 2423 193 13 10 chrUextra 25000347 25000953 -4003703 - SAR_DM Satellite Satellite -396 1076 469 1 775 1620 0 0 0 chrUextra 25001053 25001325 -4003331 + (GAGAA)n Simple_repeat Simple_repeat 1 272 0 1 775 2682 179 11 10 chrUextra 25001786 25002407 -4002249 - SAR_DM Satellite Satellite -627 845 224 1 775 470 81 14 0 chrUextra 25002345 25002419 -4002237 + ARS406_DM Unknown Unknown 1 75 -278 1 775 4796 13 9 0 chrUextra 25002519 25003152 -4001504 + STALKER4_I LTR Gypsy 5846 6484 -46 1 775 2904 166 11 9 chrUextra 25003252 25003884 -4000772 - SAR_DM Satellite Satellite -488 984 352 1 775 4722 33 0 0 chrUextra 25003985 25004567 -4000089 - R1_DM LINE R1 -3398 1958 1377 1 775 348 23 0 0 chrUextra 25004575 25004618 -4000038 + FW_DM LINE Jockey 1 43 -4649 1 775 1241 7 0 7 chrUextra 25004718 25004865 -3999791 + (GAGAA)n Simple_repeat Simple_repeat 2 147 0 1 775 735 147 0 0 chrUextra 25004923 25005100 -3999556 + (CACCAT)n Simple_repeat Simple_repeat 4 180 0 1 775 208 0 0 160 chrUextra 25005143 25005324 -3999332 + (CATTC)n Simple_repeat Simple_repeat 4 155 0 1 775 21 89 0 0 chrUextra 25005767 25005823 -3998833 + AT_rich Low_complexity Low_complexity 1 56 0 1 775 2041 0 0 8 chrUextra 25005842 25006082 -3998574 - SSU-rRNA_Dme rRNA rRNA 0 1995 1758 1 775 1126 277 65 27 chrUextra 25006923 25007475 -3997181 - G6_DM LINE Jockey -1227 815 243 1 775 2599 185 8 8 chrUextra 25007650 25008265 -3996391 + SAR_DM Satellite Satellite 462 1076 -396 1 775 5070 9 81 0 chrUextra 25008383 25009016 -3995640 - DMRT1B LINE R1 -492 4691 4008 1 775 2668 47 9 13 chrUextra 25009116 25009749 -3994907 - DOC2_DM LINE Jockey -3760 1033 352 1 775 2461 76 16 36 chrUextra 25009851 25010482 -3994174 - DMSAT6 Satellite Satellite -92 618 1 1 775 2075 183 6 13 chrUextra 25010582 25011057 -3993599 + SAR_DM Satellite Satellite 443 914 -558 1 775 968 108 0 0 chrUextra 25011054 25011212 -3993444 - ARS406_DM Unknown Unknown -195 158 1 1 775 364 0 0 0 chrUextra 25011315 25011358 -3993298 + R1_DM LINE R1 5314 5356 0 1 775 5165 3 0 0 chrUextra 25011356 25011948 -3992708 + LSU-rRNA_Dme rRNA rRNA 2640 3231 -669 1 775 5488 0 3 0 chrUextra 25012052 25012681 -3991975 - LSU-rRNA_Dme rRNA rRNA -238 3662 3032 1 775 1326 23 0 11 chrUextra 25012781 25012957 -3991699 - NTS_DM Other Other -66 174 1 1 775 1734 21 17 17 chrUextra 25012957 25013197 -3991459 - NTS_DM Other Other 0 240 1 1 775 626 20 38 38 chrUextra 25013197 25013302 -3991354 - NTS_DM Other Other 0 240 136 1 775 3872 46 107 6 chrUextra 25013514 25014147 -3990509 - PROTOP DNA P -3625 855 159 1 775 2036 133 11 11 chrUextra 25014247 25014880 -3989776 - DMSAT6 Satellite Satellite -87 633 1 1 775 920 84 9 23 chrUextra 25014981 25015613 -3989043 - RSP Satellite Satellite -34 623 1 1 775 4446 25 95 0 chrUextra 25015713 25016346 -3988310 - R1_DM LINE R1 -363 4993 4301 1 775 2669 157 16 42 chrUextra 25016446 25017066 -3987590 - SAR_DM Satellite Satellite -543 929 326 1 775 542 0 0 0 chrUextra 25017179 25017251 -3987405 + TABOR_I LTR Gypsy 6265 6336 0 1 775 4418 2 0 0 chrUextra 25017249 25017755 -3986901 + TABOR_LTR LTR Gypsy 1 506 0 1 775 513 0 0 0 chrUextra 25017755 25017812 -3986844 + (CAAGA)n Simple_repeat Simple_repeat 5 61 0 1 775 1024 22 117 0 chrUextra 25017915 25018052 -3986604 + PROTOP_B DNA P 3 155 -998 1 775 3533 78 4 16 chrUextra 25018050 25018545 -3986111 + Gypsy12_I LTR Gypsy 4657 5145 -401 1 775 4079 38 2 51 chrUextra 25018645 25019278 -3985378 - DM176_I LTR Gypsy -5623 797 196 1 775 908 60 3 17 chrUextra 25019379 25020005 -3984651 + RSP Satellite Satellite 1 617 0 1 775 1073 69 0 0 chrUextra 25020111 25020255 -3984401 + R1_DM LINE R1 1650 1793 -3563 1 775 2316 128 0 98 chrUextra 25020256 25020725 -3983931 + R1_DM LINE R1 310 732 -4624 1 775 2728 177 8 16 chrUextra 25020846 25021477 -3983179 - SAR_DM Satellite Satellite -549 923 298 1 775 1032 25 25 25 chrUextra 25021578 25021741 -3982915 + NTS_DM Other Other 78 240 0 1 775 1756 17 17 17 chrUextra 25021741 25021981 -3982675 + NTS_DM Other Other 1 240 0 1 775 1720 13 22 13 chrUextra 25021981 25022210 -3982446 + NTS_DM Other Other 1 231 -9 1 775 1689 5 14 5 chrUextra 25022310 25022523 -3982133 - NTS_DM Other Other -25 215 1 1 775 1861 0 17 13 chrUextra 25022523 25022762 -3981894 - NTS_DM Other Other 0 240 1 1 775 1280 6 22 17 chrUextra 25022762 25022943 -3981713 - NTS_DM Other Other 0 240 59 1 775 826 52 0 29 chrUextra 25023538 25023676 -3980980 + DMSAT6 Satellite Satellite 254 387 -83 1 775 29 0 0 0 chrUextra 25023870 25023899 -3980757 + AT_rich Low_complexity Low_complexity 1 29 0 1 775 21 0 0 0 chrUextra 25023920 25023941 -3980715 + AT_rich Low_complexity Low_complexity 1 21 0 1 775 37 23 0 0 chrUextra 25024032 25024076 -3980580 + AT_rich Low_complexity Low_complexity 1 44 0 1 775 21 0 0 0 chrUextra 25024097 25024118 -3980538 + AT_rich Low_complexity Low_complexity 1 21 0 1 775 4226 31 65 2 chrUextra 25024509 25025142 -3979514 - R1_DM LINE R1 -1790 3566 2894 1 775 780 21 0 0 chrUextra 25025242 25025336 -3979320 + (CAATA)n Simple_repeat Simple_repeat 3 96 0 1 775 2640 184 28 6 chrUextra 25025975 25026608 -3978048 + SAR_DM Satellite Satellite 357 1003 -469 1 775 2950 157 9 13 chrUextra 25026708 25027341 -3977315 - SAR_DM Satellite Satellite -436 1036 406 1 775 865 91 8 8 chrUextra 25027441 25027574 -3977082 + DNAREP1_DM LINE Penelope 245 377 -217 1 775 263 171 289 0 chrUextra 25027572 25027648 -3977008 + DM176_I LTR Gypsy 4527 4624 -1796 1 775 1387 130 3 99 chrUextra 25027747 25028071 -3976585 + Gypsy8_LTR LTR Gypsy 1 293 -11 1 775 951 80 8 17 chrUextra 25028176 25028800 -3975856 - RSP Satellite Satellite -54 618 1 1 775 2590 173 16 13 chrUextra 25029653 25030263 -3974393 + SAR_DM Satellite Satellite 326 937 -535 1 775 1578 11 0 0 chrUextra 25030384 25030564 -3974092 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 1 775 1900 35 3 90 chrUextra 25030579 25030889 -3973767 + BATUMI_I LTR Pao 7002 7284 -679 1 775 792 70 0 17 chrUextra 25030889 25031005 -3973651 + BATUMI_I LTR Pao 1 114 -7849 1 775 3127 101 51 30 chrUextra 25031106 25031731 -3972925 - STALKER4_I LTR Gypsy -5215 1315 678 1 775 2873 168 11 8 chrUextra 25031839 25032469 -3972187 + SAR_DM Satellite Satellite 406 1037 -435 1 775 308 312 35 52 chrUextra 25032748 25033146 -3971510 - BURDOCK_I LTR Gypsy -4643 1492 850 1 775 2252 177 16 5 chrUextra 25033305 25033937 -3970719 - SAR_DM Satellite Satellite -673 639 1 1 775 22 0 0 0 chrUextra 25034303 25034325 -3970331 + AT_rich Low_complexity Low_complexity 1 22 0 1 775 269 246 0 0 chrUextra 25034584 25034653 -3970003 + BS2 LINE Jockey 4146 4214 -507 1 776 2212 96 25 38 chrUextra 25034773 25035404 -3969252 - DMSAT6 Satellite Satellite -64 622 1 1 776 34 24 0 0 chrUextra 25036744 25036785 -3967871 + AT_rich Low_complexity Low_complexity 1 41 0 1 776 5456 2 0 2 chrUextra 25036970 25037603 -3967053 - DOC LINE Jockey -954 3771 3140 1 776 4588 55 5 10 chrUextra 25037703 25038329 -3966327 - R1_DM LINE R1 -4663 693 71 1 776 4942 33 8 5 chrUextra 25038436 25039069 -3965587 + CIRCE LINE Composite 3167 3801 -2555 1 776 255 31 0 0 chrUextra 25039169 25039201 -3965455 + (TCTTG)n Simple_repeat Simple_repeat 3 34 0 1 776 5092 32 2 2 chrUextra 25039903 25040535 -3964121 + DOC3_DM LINE Jockey 2274 2905 -1835 1 776 5354 6 11 0 chrUextra 25040635 25041268 -3963388 + R1_DM LINE R1 1584 2223 -3133 1 776 899 58 0 0 chrUextra 25041368 25041488 -3963168 + IDEFIX_I LTR Gypsy 2292 2411 -3217 1 776 768 193 37 19 chrUextra 25041503 25041719 -3962937 - T412LTR LTR LTR -17 464 245 1 776 1043 124 226 34 chrUextra 25042500 25042734 -3961922 + DMRT1B LINE R1 4815 5093 -90 1 776 5101 18 2 6 chrUextra 25042845 25043467 -3961189 + FW_DM LINE Jockey 3600 4218 -474 1 776 2713 178 29 8 chrUextra 25044304 25044932 -3959724 - SAR_DM Satellite Satellite -620 852 212 1 776 22 35 0 0 chrUextra 25045033 25045062 -3959594 + AT_rich Low_complexity Low_complexity 1 29 0 1 776 21 95 0 0 chrUextra 25045275 25045338 -3959318 + AT_rich Low_complexity Low_complexity 1 63 0 1 776 2321 0 0 82 chrUextra 25045350 25045666 -3958990 + LSU-rRNA_Dme rRNA rRNA 1 290 -3610 1 776 5355 2 6 0 chrUextra 25045766 25046399 -3958257 - DMRT1A LINE R1 -3611 1572 936 1 776 28 48 0 0 chrUextra 25046778 25046820 -3957836 + AT_rich Low_complexity Low_complexity 1 42 0 1 776 5446 0 0 2 chrUextra 25047232 25047865 -3956791 + BS LINE Jockey 642 1273 -3853 1 776 738 0 0 0 chrUextra 25047965 25048047 -3956609 + (CTTAT)n Simple_repeat Simple_repeat 2 83 0 1 776 21 0 0 0 chrUextra 25049259 25049280 -3955376 + AT_rich Low_complexity Low_complexity 1 21 0 1 776 5082 14 2 3 chrUextra 25049431 25050064 -3954592 + DMRT1B LINE R1 519 1150 -4033 1 776 540 168 17 0 chrUextra 25050164 25050283 -3954373 - ARS406_DM Unknown Unknown -232 121 1 1 776 2539 177 16 21 chrUextra 25050181 25050797 -3953859 + SAR_DM Satellite Satellite 185 797 -675 1 776 1063 57 6 59 chrUextra 25050898 25051067 -3953589 + Gypsy6A_LTR LTR Gypsy 191 350 -70 1 776 1446 100 29 0 chrUextra 25051066 25051307 -3953349 - STALKER4_I LTR Gypsy -3666 2864 2617 1 776 280 28 0 0 chrUextra 25051309 25051345 -3953311 - STALKER4_I LTR Gypsy -4180 2350 2315 1 776 876 67 0 8 chrUextra 25051354 25051475 -3953181 - STALKER4_I LTR Gypsy -4336 2194 2075 1 776 1260 6 0 24 chrUextra 25051676 25051842 -3952814 - NTS_DM Other Other -78 162 1 1 776 1861 0 17 13 chrUextra 25051842 25052081 -3952575 - NTS_DM Other Other 0 240 1 1 776 1300 6 22 16 chrUextra 25052081 25052263 -3952393 - NTS_DM Other Other 0 240 58 1 776 1882 194 14 14 chrUextra 25053099 25053590 -3951066 + SAR_DM Satellite Satellite 586 1076 -396 1 776 585 146 73 8 chrUextra 25053605 25053729 -3950927 + SAR_DM Satellite Satellite 906 1037 -435 1 776 387 0 0 0 chrUextra 25053829 25053878 -3950778 - HMSBEAGLE_I LTR Gypsy -6480 49 1 1 776 2316 8 0 0 chrUextra 25053877 25054143 -3950513 - DMLTR5 LTR Gypsy 0 266 1 1 776 657 119 0 0 chrUextra 25054143 25054244 -3950412 + (TATG)n Simple_repeat Simple_repeat 2 102 0 1 776 1158 122 0 0 chrUextra 25054243 25054423 -3950233 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 776 1885 46 32 41 chrUextra 25054566 25054906 -3949750 + BATUMI_I LTR Pao 603 922 -7041 1 776 2260 35 0 10 chrUextra 25054906 25055195 -3949461 + BATUMI_I LTR Pao 1630 1915 -6048 1 776 930 66 7 20 chrUextra 25055350 25055928 -3948728 - RSP Satellite Satellite 0 570 1 1 776 5051 40 2 0 chrUextra 25056028 25056659 -3947997 + DMCR1A LINE CR1 438 1069 -3401 1 776 2571 185 7 8 chrUextra 25056761 25057366 -3947290 + SAR_DM Satellite Satellite 473 1076 -396 1 776 1222 18 0 12 chrUextra 25057515 25057681 -3946975 - NTS_DM Other Other -39 201 38 1 776 870 9 0 27 chrUextra 25057681 25057793 -3946863 - NTS_DM Other Other -107 133 25 1 776 1252 18 0 6 chrUextra 25057845 25058010 -3946646 - NTS_DM Other Other -39 201 38 1 776 848 18 0 27 chrUextra 25058010 25058122 -3946534 - NTS_DM Other Other -107 133 25 1 776 4502 35 33 3 chrUextra 25058227 25058860 -3945796 - PROTOP DNA P -3506 974 323 1 776 1274 0 0 0 chrUextra 25059446 25059593 -3945063 - ROO_LTR LTR Pao 0 428 282 1 776 1893 104 30 23 chrUextra 25059921 25060315 -3944341 + DMSAT6 Satellite Satellite 17 413 -57 1 776 1723 25 17 17 chrUextra 25060450 25060690 -3943966 - NTS_DM Other Other 0 240 1 1 776 1737 21 17 17 chrUextra 25060690 25060930 -3943726 - NTS_DM Other Other 0 240 1 1 776 777 24 31 31 chrUextra 25060930 25061059 -3943597 - NTS_DM Other Other 0 240 112 1 776 410 21 0 0 chrUextra 25061159 25061207 -3943449 + DM176_I LTR Gypsy 6373 6420 0 1 776 2198 11 0 78 chrUextra 25061207 25061514 -3943142 + DM176_LTR LTR Gypsy 1 283 -224 1 776 2002 24 16 0 chrUextra 25061515 25061768 -3942888 + DM176_LTR LTR Gypsy 251 507 0 1 776 5135 28 0 2 chrUextra 25061892 25062525 -3942131 + R1_DM LINE R1 2106 2737 -2619 1 776 279 29 0 0 chrUextra 25062625 25062659 -3941997 - NTS_DM Other Other -206 34 1 1 776 1370 30 20 20 chrUextra 25062659 25062862 -3941794 - NTS_DM Other Other 0 240 38 1 776 817 0 0 0 chrUextra 25062862 25062958 -3941698 - NTS_DM Other Other -107 133 38 1 776 832 9 9 27 chrUextra 25062958 25063069 -3941587 - NTS_DM Other Other -107 133 25 1 776 21 57 0 0 chrUextra 25063095 25063130 -3941526 + AT_rich Low_complexity Low_complexity 1 35 0 1 776 876 24 0 8 chrUextra 25063130 25063258 -3941398 - NTS_DM Other Other -39 201 75 1 776 4778 32 27 0 chrUextra 25063358 25063983 -3940673 + PROTOP DNA P 66 707 -3773 1 776 366 23 0 0 chrUextra 25064091 25064135 -3940521 + DMCR1A LINE CR1 2795 2838 -1632 1 776 2196 60 22 39 chrUextra 25064132 25064723 -3939933 - DMSAT6 Satellite Satellite -149 580 1 1 776 5188 11 2 0 chrUextra 25064824 25065457 -3939199 - Invader2_I LTR Gypsy -418 4174 3541 1 776 954 20 26 26 chrUextra 25065557 25065709 -3938947 + NTS_DM Other Other 89 240 0 1 776 1734 21 17 17 chrUextra 25065709 25065949 -3938707 + NTS_DM Other Other 1 240 0 1 776 1756 17 17 17 chrUextra 25065949 25066189 -3938467 + NTS_DM Other Other 1 240 0 1 776 5343 3 2 0 chrUextra 25066290 25066913 -3937743 - R1_DM LINE R1 -25 5331 4708 1 776 5034 21 9 8 chrUextra 25067023 25067655 -3937001 + FW_DM LINE Jockey 3891 4523 -169 1 776 304 100 20 0 chrUextra 25067755 25067805 -3936851 + ARS406_DM Unknown Unknown 139 189 -164 1 776 2616 181 20 7 chrUextra 25067768 25068376 -3936280 - SAR_DM Satellite Satellite -620 852 237 1 776 324 117 17 0 chrUextra 25068327 25068387 -3936269 + ARS406_DM Unknown Unknown 1 61 -292 1 776 2429 78 25 22 chrUextra 25068487 25069119 -3935537 - DMSAT6 Satellite Satellite -122 634 1 1 776 2134 208 55 34 chrUextra 25069221 25069844 -3934812 - Gypsy12_LTR LTR Gypsy -198 2138 1503 1 776 5342 5 5 0 chrUextra 25069951 25070574 -3934082 - LSU-rRNA_Dme rRNA rRNA -635 3265 2640 1 776 2552 180 9 22 chrUextra 25070683 25071313 -3933343 + SAR_DM Satellite Satellite 498 1119 -353 1 776 406 0 37 0 chrUextra 25071490 25071544 -3933112 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 776 3516 5 0 0 chrUextra 25071641 25072045 -3932611 + SSU-rRNA_Dme rRNA rRNA 1 404 -1591 1 776 497 91 0 0 chrUextra 25072149 25072257 -3932399 - RSP Satellite Satellite -54 108 1 1 776 836 82 0 14 chrUextra 25072296 25072577 -3932079 - RSP Satellite Satellite 0 277 1 1 776 814 86 0 12 chrUextra 25072616 25072777 -3931879 - RSP Satellite Satellite 0 159 1 1 776 5378 0 2 0 chrUextra 25072879 25073510 -3931146 + ROO_I LTR Pao 3684 4315 -3941 1 776 2366 174 14 11 chrUextra 25073612 25074243 -3930413 - SAR_DM Satellite Satellite -416 633 1 1 776 5277 6 3 5 chrUextra 25074343 25074975 -3929681 - LSU-rRNA_Dme rRNA rRNA -2216 1684 1054 1 776 2846 176 6 6 chrUextra 25075078 25075705 -3928951 + SAR_DM Satellite Satellite 382 1008 -464 1 776 332 25 0 0 chrUextra 25075807 25075847 -3928809 - NTS_DM Other Other -200 40 1 1 776 1674 21 16 25 chrUextra 25075847 25076089 -3928567 - NTS_DM Other Other 0 240 1 1 776 1408 20 20 20 chrUextra 25076089 25076292 -3928364 - NTS_DM Other Other 0 240 38 1 776 817 0 0 0 chrUextra 25076292 25076388 -3928268 - NTS_DM Other Other -107 133 38 1 776 391 0 0 0 chrUextra 25076388 25076439 -3928217 - NTS_DM Other Other -107 133 83 1 776 1075 144 64 5 chrUextra 25076755 25076958 -3927698 + DNAREP1_DM LINE Penelope 22 236 -358 1 776 212 0 0 35 chrUextra 25077009 25077038 -3927618 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 776 1198 36 499 80 chrUextra 25077271 25077634 -3927022 + MDG1_I LTR Gypsy 6082 6596 0 1 776 383 68 17 0 chrUextra 25077650 25077709 -3926947 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 776 1239 83 115 0 chrUextra 25077711 25077903 -3926753 + MDG1_LTR LTR Gypsy 94 307 -135 1 776 1828 206 32 65 chrUextra 25078008 25078635 -3926021 + TART LINE telomeric 3729 4029 -10448 1 776 662 200 6 19 chrUextra 25078902 25079060 -3925596 + HETRP_DM Satellite Satellite 1529 1684 -188 1 776 593 207 7 14 chrUextra 25079184 25079326 -3925330 + HETRP_DM Satellite Satellite 1529 1669 -203 1 776 5510 5 0 0 chrUextra 25079467 25080099 -3924557 + BS2 LINE Jockey 3045 3676 -1045 1 776 2851 170 8 9 chrUextra 25080199 25080830 -3923826 - SAR_DM Satellite Satellite -418 1054 425 1 776 1496 170 25 8 chrUextra 25080945 25081558 -3923098 + SAR_DM Satellite Satellite 1 623 -858 1 776 5545 3 0 0 chrUextra 25081663 25082295 -3922361 - BS LINE Jockey -44 5082 4451 1 776 1507 35 0 0 chrUextra 25082395 25082592 -3922064 + R1_DM LINE R1 895 1091 -4265 1 776 3556 14 0 0 chrUextra 25082606 25083027 -3921629 + R1_DM LINE R1 1763 2183 -3173 1 776 2571 67 29 8 chrUextra 25083127 25083759 -3920897 - DMSAT6 Satellite Satellite -61 645 1 1 776 2414 105 6 32 chrUextra 25084591 25085217 -3919439 - DMSAT6 Satellite Satellite -52 609 1 1 776 2565 176 21 21 chrUextra 25085323 25085955 -3918701 - SAR_DM Satellite Satellite -582 890 259 1 776 2644 183 13 8 chrUextra 25086057 25086685 -3917971 - SAR_DM Satellite Satellite -549 923 293 1 776 5271 14 0 0 chrUextra 25086787 25087419 -3917237 - DOC2_DM LINE Jockey -1555 3238 2607 1 776 251 61 0 0 chrUextra 25087519 25087552 -3917104 - LSU-rRNA_Dme rRNA rRNA -1228 2672 2640 1 776 4478 0 0 2 chrUextra 25087550 25088068 -3916588 - R1_DM LINE R1 0 5356 4840 1 776 730 0 12 0 chrUextra 25088065 25088151 -3916505 - LSU-rRNA_Dme rRNA rRNA -1262 2638 2552 1 776 1621 224 43 44 chrUextra 25088251 25088883 -3915773 - SAR_DM Satellite Satellite -500 972 342 1 776 2242 89 57 24 chrUextra 25088983 25089615 -3915041 + DMSAT6 Satellite Satellite 1 653 -3 1 776 5312 3 5 0 chrUextra 25090447 25091079 -3913577 + Gypsy_I LTR Gypsy 5 639 -5868 1 776 5027 9 73 0 chrUextra 25091181 25091811 -3912845 - FW_DM LINE Jockey -2633 2059 1384 1 776 2629 173 47 8 chrUextra 25091921 25092540 -3912116 - SAR_DM Satellite Satellite -590 882 240 1 776 2679 167 45 11 chrUextra 25092651 25093275 -3911381 - SAR_DM Satellite Satellite -416 1056 412 1 776 4905 35 2 2 chrUextra 25093375 25094007 -3910649 - PROTOP DNA P -3801 679 48 1 776 1620 7 0 0 chrUextra 25094111 25094531 -3910125 + (GAGAA)n Simple_repeat Simple_repeat 1 420 0 1 776 5159 8 5 2 chrUextra 25095571 25096203 -3908453 + HETA LINE telomeric 2899 3532 -2549 1 776 5084 9 0 2 chrUextra 25096303 25096935 -3907721 + DM297_I LTR Gypsy 4405 5035 -1132 1 776 887 70 14 7 chrUextra 25097035 25097180 -3907476 - DMSAT6 Satellite Satellite -61 409 264 1 776 2428 88 26 15 chrUextra 25097193 25097655 -3907001 - DMSAT6 Satellite Satellite -3 467 1 1 776 220 252 26 26 chrUextra 25098049 25098163 -3906493 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 1 776 2527 175 10 24 chrUextra 25098499 25099119 -3905537 + SAR_DM Satellite Satellite 508 1118 -354 1 776 314 202 0 21 chrUextra 25099033 25099129 -3905527 - XDMR_DM Unknown Unknown 0 360 267 1 776 2669 173 30 13 chrUextra 25099231 25099863 -3904793 + SAR_DM Satellite Satellite 228 870 -602 1 776 704 174 173 20 chrUextra 25099963 25100217 -3904439 - Gypsy12A_LTR LTR Gypsy -1106 1230 826 1 776 552 251 27 38 chrUextra 25100270 25100595 -3904061 - Gypsy12A_LTR LTR Gypsy -1786 550 238 1 776 2076 208 59 6 chrUextra 25100698 25101324 -3903332 + SAR_DM Satellite Satellite 1 658 -396 1 776 399 0 62 47 chrUextra 25101427 25101491 -3903165 + NTS_DM Other Other 176 240 0 1 776 1241 6 0 30 chrUextra 25101491 25101658 -3902998 + NTS_DM Other Other 1 162 -78 1 776 488 119 36 0 chrUextra 25101768 25101852 -3902804 + NTS_DM Other Other 4 90 -150 1 776 3442 118 9 11 chrUextra 25102159 25102788 -3901868 - BATUMI_I LTR Pao -2927 4987 4315 1 776 2770 164 15 7 chrUextra 25102899 25103506 -3901150 - SAR_DM Satellite Satellite -535 937 326 1 776 24 32 0 0 chrUextra 25103925 25103956 -3900700 + AT_rich Low_complexity Low_complexity 1 31 0 1 776 2662 172 13 15 chrUextra 25104359 25104962 -3899694 - SAR_DM Satellite Satellite -625 847 246 1 776 313 138 0 15 chrUextra 25104921 25104987 -3899669 + ARS406_DM Unknown Unknown 1 65 -288 1 776 5047 9 13 3 chrUextra 25105087 25105719 -3898937 + Invader2_I LTR Gypsy 1865 2502 -2090 1 776 5198 3 2 3 chrUextra 25105819 25106451 -3898205 - R1_DM LINE R1 -4136 1220 590 1 776 2624 181 7 8 chrUextra 25107283 25107889 -3896767 - SAR_DM Satellite Satellite -676 796 192 1 776 846 66 0 0 chrUextra 25107793 25107915 -3896741 + ARS406_DM Unknown Unknown 1 122 -231 1 776 2957 160 8 8 chrUextra 25108015 25108632 -3896024 - SAR_DM Satellite Satellite -487 985 369 1 776 5329 2 2 5 chrUextra 25108751 25109379 -3895277 - LSU-rRNA_Dme rRNA rRNA -2540 1360 735 1 776 1893 0 9 4 chrUextra 25109479 25109712 -3894944 + LSU-rRNA_Dme rRNA rRNA 1555 1788 -2112 1 776 3130 0 0 0 chrUextra 25109756 25110111 -3894545 + LSU-rRNA_Dme rRNA rRNA 1788 2142 -1758 1 776 2727 178 13 6 chrUextra 25110214 25110843 -3893813 + SAR_DM Satellite Satellite 230 862 -610 1 776 1620 2 0 2 chrUextra 25110943 25111355 -3893301 + (CACAA)n Simple_repeat Simple_repeat 1 411 0 1 776 1359 0 0 0 chrUextra 25111675 25111833 -3892823 - HMSBEAGLE_I LTR Gypsy -6371 158 1 1 776 2316 8 0 0 chrUextra 25111832 25112098 -3892558 - DMLTR5 LTR Gypsy 0 266 1 1 776 1158 122 0 0 chrUextra 25112118 25112298 -3892358 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 776 2434 182 24 15 chrUextra 25112425 25113039 -3891617 - SAR_DM Satellite Satellite -396 1076 457 1 776 3428 260 21 42 chrUextra 25113139 25114497 -3890159 + SAR_DM Satellite Satellite 1 1329 -216 1 776 2306 89 25 17 chrUextra 25114603 25115235 -3889421 + DMSAT6 Satellite Satellite 1 636 -32 1 776 2725 179 11 9 chrUextra 25115335 25115966 -3888690 + SAR_DM Satellite Satellite 302 933 -539 1 776 1017 268 13 24 chrUextra 25116067 25116519 -3888137 + Gypsy11_I LTR Gypsy 2941 3387 -137 1 776 261 306 0 0 chrUextra 25117303 25117388 -3887268 - ROO_I LTR Pao -2946 5310 5226 1 776 1608 184 91 29 chrUextra 25117543 25117642 -3887014 - SAR_DM Satellite Satellite -416 657 535 1 776 640 74 0 10 chrUextra 25117642 25117738 -3886918 + ARS406_DM Unknown Unknown 95 189 -164 1 776 1608 184 91 29 chrUextra 25117738 25118162 -3886494 - SAR_DM Satellite Satellite -416 534 1 1 776 5435 0 0 2 chrUextra 25118263 25118893 -3885763 + LSU-rRNA_Dme rRNA rRNA 647 1275 -2625 1 776 2858 161 22 10 chrUextra 25118999 25119627 -3885029 - SAR_DM Satellite Satellite -416 1056 421 1 776 2824 254 27 20 chrUextra 25119728 25121018 -3883638 - SAR_DM Satellite Satellite -718 1298 1 1 776 534 55 0 0 chrUextra 25121018 25121091 -3883565 + ARS406_DM Unknown Unknown 73 145 -208 1 776 449 93 0 13 chrUextra 25121191 25121267 -3883389 - ARS406_DM Unknown Unknown -278 75 1 1 776 2599 182 7 10 chrUextra 25121204 25121820 -3882836 + SAR_DM Satellite Satellite 224 837 -635 1 776 2491 93 13 26 chrUextra 25121930 25122540 -3882116 + DMSAT6 Satellite Satellite 1 602 -1 1 776 2146 12 0 0 chrUextra 25122655 25122907 -3881749 + Invader1_LTR LTR Gypsy 172 423 0 1 776 487 240 0 16 chrUextra 25122924 25123047 -3881609 - HETRP_DM Satellite Satellite -203 1669 1549 1 776 390 21 0 0 chrUextra 25123047 25123094 -3881562 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 776 257 194 29 15 chrUextra 25123219 25123287 -3881369 - HETRP_DM Satellite Satellite -197 1675 1607 1 776 1620 5 0 0 chrUextra 25123387 25124019 -3880637 + (CATCT)n Simple_repeat Simple_repeat 1 632 0 1 776 826 0 0 0 chrUextra 25124119 25124213 -3880443 - ROO_I LTR Pao -8162 94 1 1 776 3736 0 0 2 chrUextra 25124213 25124642 -3880014 - ROO_LTR LTR Pao 0 428 1 1 776 354 204 0 0 chrUextra 25124648 25124746 -3879910 + (CTATT)n Simple_repeat Simple_repeat 2 99 0 1 776 5410 5 0 0 chrUextra 25124851 25125483 -3879173 + R1_DM LINE R1 3055 3686 -1670 1 776 2273 221 27 17 chrUextra 25125583 25126215 -3878441 + G_DM LINE Jockey 900 1537 -2809 1 776 1486 112 8 4 chrUextra 25126458 25126701 -3877955 + BS2 LINE Jockey 14 257 -4464 1 776 1723 49 12 8 chrUextra 25126700 25126947 -3877709 - G5_DM LINE Jockey 0 4856 4609 1 776 5035 35 2 0 chrUextra 25127047 25127679 -3876977 - NINJA_I LTR Pao -1022 4989 4357 1 776 880 73 3 20 chrUextra 25127779 25128411 -3876245 - RSP Satellite Satellite -27 621 1 1 776 21 95 0 0 chrUextra 25129481 25129544 -3875112 + AT_rich Low_complexity Low_complexity 1 63 0 1 776 2365 3 0 78 chrUextra 25129556 25129875 -3874781 + LSU-rRNA_Dme rRNA rRNA 1 294 -3606 1 776 2538 177 10 12 chrUextra 25129975 25130581 -3874075 + SAR_DM Satellite Satellite 472 1076 -396 1 776 236 121 16 49 chrUextra 25130546 25130607 -3874049 - XDMR_DM Unknown Unknown 0 360 302 1 776 5464 3 0 0 chrUextra 25130710 25131339 -3873317 + LSU-rRNA_Dme rRNA rRNA 1826 2454 -1446 1 776 1182 58 0 0 chrUextra 25131439 25131610 -3873046 - QUASIMODO_I LTR Gypsy -1430 4630 4460 1 776 22 56 0 0 chrUextra 25131610 25131646 -3873010 + AT_rich Low_complexity Low_complexity 1 36 0 1 776 2631 9 84 0 chrUextra 25131726 25132071 -3872585 - QUASIMODO_I LTR Gypsy -1068 4992 4619 1 776 1393 192 9 25 chrUextra 25132178 25132493 -3872163 - Gypsy12_LTR LTR Gypsy -2014 322 13 1 776 2096 88 0 10 chrUextra 25132505 25132803 -3871853 - Gypsy12_I LTR Gypsy 0 5546 5252 1 776 5098 18 8 8 chrUextra 25132903 25133535 -3871121 + FW_DM LINE Jockey 3863 4494 -198 1 776 21 57 0 0 chrUextra 25133703 25133738 -3870918 + AT_rich Low_complexity Low_complexity 1 35 0 1 776 600 41 0 0 chrUextra 25134194 25134267 -3870389 - PROTOP_A DNA P -1 1104 1031 1 776 5453 2 0 0 chrUextra 25134367 25134999 -3869657 - LSU-rRNA_Dme rRNA rRNA -2668 1232 601 1 776 672 108 0 0 chrUextra 25135100 25135200 -3869456 - S_DM DNA Tc1 -654 1082 983 1 776 4415 13 0 0 chrUextra 25135200 25135731 -3868925 - PROTOP_A DNA P 0 1105 575 1 776 2530 179 8 8 chrUextra 25135831 25136428 -3868228 - SAR_DM Satellite Satellite -684 788 192 1 776 859 92 0 0 chrUextra 25136332 25136463 -3868193 + ARS406_DM Unknown Unknown 1 131 -222 1 776 468 0 0 0 chrUextra 25137295 25137347 -3867309 + (CAAGA)n Simple_repeat Simple_repeat 5 56 0 1 776 1085 20 0 7 chrUextra 25138027 25138177 -3866479 + NTS_DM Other Other 53 201 -39 1 776 21 57 0 0 chrUextra 25138177 25138212 -3866444 + AT_rich Low_complexity Low_complexity 1 35 0 1 776 806 19 9 27 chrUextra 25138238 25138349 -3866307 + NTS_DM Other Other 25 133 -107 1 776 1438 15 20 20 chrUextra 25138349 25138552 -3866104 + NTS_DM Other Other 38 240 0 1 776 870 28 0 0 chrUextra 25138552 25138659 -3865997 + NTS_DM Other Other 1 107 -133 1 776 5430 2 0 2 chrUextra 25138759 25139391 -3865265 + R1_DM LINE R1 1703 2333 -3023 1 776 1727 186 60 28 chrUextra 25139494 25140122 -3864534 - SAR_DM Satellite Satellite -514 648 1 1 776 2250 117 14 29 chrUextra 25140222 25140853 -3863803 - DMSAT6 Satellite Satellite -17 622 1 1 776 2634 182 10 11 chrUextra 25140953 25141580 -3863076 - SAR_DM Satellite Satellite -652 820 195 1 776 802 23 38 23 chrUextra 25141684 25141817 -3862839 + NTS_DM Other Other 106 240 0 1 776 1850 4 17 13 chrUextra 25141817 25142056 -3862600 + NTS_DM Other Other 1 240 0 1 776 1861 0 17 13 chrUextra 25142056 25142295 -3862361 + NTS_DM Other Other 1 240 0 1 776 5373 16 0 0 chrUextra 25142415 25143046 -3861610 + R2_DM LINE R2 2935 3565 -42 1 776 5167 24 5 0 chrUextra 25143146 25143777 -3860879 + R1_DM LINE R1 2925 3558 -1798 1 776 3183 81 61 5 chrUextra 25143989 25144508 -3860148 + TRANSIB2 DNA Transib 1810 2745 -99 1 776 2448 176 17 21 chrUextra 25144608 25145239 -3859417 + SAR_DM Satellite Satellite 180 808 -664 1 776 2999 240 32 15 chrUextra 25145339 25146684 -3857972 - SAR_DM Satellite Satellite -621 1368 1 1 776 770 62 9 0 chrUextra 25146589 25146701 -3857955 + ARS406_DM Unknown Unknown 1 113 -240 1 776 2605 166 33 12 chrUextra 25146819 25147418 -3857238 + SAR_DM Satellite Satellite 326 937 -535 1 776 1008 44 0 0 chrUextra 25147295 25147432 -3857224 - ARS406_DM Unknown Unknown -164 189 53 1 776 5372 14 0 0 chrUextra 25147532 25148163 -3856493 - DMRT1A LINE R1 -1363 3820 3190 1 776 2782 178 11 5 chrUextra 25148267 25148893 -3855763 + SAR_DM Satellite Satellite 224 853 -619 1 776 536 310 18 4 chrUextra 25149381 25149608 -3855048 + Invader4_I LTR Gypsy 1 230 -2183 1 776 1625 19 0 5 chrUextra 25149727 25149934 -3854722 - NTS_DM Other Other -34 206 1 1 776 1408 20 20 20 chrUextra 25149934 25150137 -3854519 - NTS_DM Other Other 0 240 38 1 776 817 0 0 0 chrUextra 25150137 25150233 -3854423 - NTS_DM Other Other -107 133 38 1 776 779 19 9 36 chrUextra 25150233 25150345 -3854311 - NTS_DM Other Other -107 133 25 1 776 1116 139 0 0 chrUextra 25150469 25150818 -3853838 + (TA)n Simple_repeat Simple_repeat 1 349 0 1 776 2291 11 0 0 chrUextra 25150821 25151087 -3853569 + DMLTR5 LTR Gypsy 1 266 0 1 776 4326 27 2 46 chrUextra 25151187 25151818 -3852838 - DM176_I LTR Gypsy -5465 955 353 1 776 2401 97 22 23 chrUextra 25151942 25152547 -3852109 - DMSAT6 Satellite Satellite 0 604 1 1 776 3277 67 4 13 chrUextra 25152649 25153115 -3851541 - R1_DM LINE R1 -4872 484 23 1 776 1216 21 0 0 chrUextra 25153136 25153280 -3851376 - R1_DM LINE R1 0 5356 5213 1 776 2294 116 32 3 chrUextra 25153380 25154011 -3850645 - DMSAT6 Satellite Satellite -250 649 1 1 776 5384 3 5 3 chrUextra 25154842 25155473 -3849183 + SSU-rRNA_Dme rRNA rRNA 1046 1677 -318 1 776 4937 11 9 2 chrUextra 25155574 25156204 -3848452 + PROTOP_A DNA P 308 942 -163 1 776 2682 180 10 8 chrUextra 25156304 25156919 -3847737 + SAR_DM Satellite Satellite 461 1076 -396 1 776 3092 85 151 39 chrUextra 25157035 25157625 -3847031 + TART_B1 LINE telomeric 3528 4183 -6471 1 776 293 26 0 0 chrUextra 25157628 25157666 -3846990 + TART LINE telomeric 1452 1489 -12988 1 776 908 83 5 17 chrUextra 25157766 25158382 -3846274 - RSP Satellite Satellite -85 608 1 1 776 2759 181 6 8 chrUextra 25158497 25159128 -3845528 - SAR_DM Satellite Satellite -645 827 198 1 776 4210 4 0 0 chrUextra 25159368 25159859 -3844797 + FW_DM LINE Jockey 887 1377 -3315 1 776 25 48 0 46 chrUextra 25160209 25160274 -3844382 + AT_rich Low_complexity Low_complexity 1 62 0 1 776 478 112 0 48 chrUextra 25160358 25160442 -3844214 + Baggins1 LINE LOA 5036 5115 -338 1 776 508 83 36 0 chrUextra 25160407 25160491 -3844165 - FB4_DM DNA Tc1 -3676 413 327 1 776 771 42 0 0 chrUextra 25160494 25160590 -3844066 + Jockey2 LINE Jockey 2530 2625 -803 1 776 2645 3 0 3 chrUextra 25160690 25160999 -3843657 + R2_DM LINE R2 3300 3607 0 1 776 455 36 0 0 chrUextra 25160996 25161051 -3843605 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 776 2288 0 7 0 chrUextra 25161051 25161321 -3843335 + R1_DM LINE R1 1 272 -5084 1 776 2640 178 11 11 chrUextra 25161422 25162052 -3842604 - SAR_DM Satellite Satellite -396 1076 447 1 776 1116 0 0 0 chrUextra 25162152 25162276 -3842380 + (GAGAA)n Simple_repeat Simple_repeat 2 125 0 1 776 3725 40 18 0 chrUextra 25162280 25162781 -3841875 - ZAM_I LTR Gypsy -861 6629 6120 1 776 5263 8 0 0 chrUextra 25162883 25163514 -3841142 - STALKER4_I LTR Gypsy -4539 1991 1361 1 776 2396 163 17 9 chrUextra 25163614 25164245 -3840411 - SAR_DM Satellite Satellite -1000 635 1 1 776 5136 24 3 0 chrUextra 25164345 25164976 -3839680 - R1_DM LINE R1 -2111 3245 2613 1 776 5360 2 0 0 chrUextra 25165076 25165707 -3838949 + NOMAD_I LTR Gypsy 5077 5707 -865 1 1 2753 169 10 11 chrUextra 25165807 25166423 -3838233 - SAR_DM Satellite Satellite -489 983 369 1 777 5486 2 2 2 chrUextra 25166538 25167169 -3837487 + LSU-rRNA_Dme rRNA rRNA 3195 3825 -75 1 777 204 40 0 0 chrUextra 25168000 25168025 -3836631 + (TTCTC)n Simple_repeat Simple_repeat 5 29 0 1 777 857 217 26 22 chrUextra 25168748 25168979 -3835677 + HOBO DNA hAT 2785 3016 0 1 777 26 0 0 0 chrUextra 25169003 25169029 -3835627 + AT_rich Low_complexity Low_complexity 1 26 0 1 777 1152 100 31 19 chrUextra 25169094 25169362 -3835294 + DNAREP1_DM LINE Penelope 4 320 -274 1 777 4299 98 32 0 chrUextra 25169462 25170093 -3834563 + Gypsy12_I LTR Gypsy 1643 2293 -3253 1 777 2817 162 22 11 chrUextra 25170194 25170824 -3833832 + SAR_DM Satellite Satellite 352 988 -484 1 777 2577 184 8 10 chrUextra 25170946 25171555 -3833101 - SAR_DM Satellite Satellite -396 1076 469 1 777 2145 116 22 23 chrUextra 25171657 25172258 -3832398 + DMSAT6 Satellite Satellite 1 599 -71 1 777 1643 172 12 8 chrUextra 25172394 25173017 -3831639 + SAR_DM Satellite Satellite 1 625 -677 1 777 211 161 36 0 chrUextra 25173692 25173748 -3830908 + GA-rich Low_complexity Low_complexity 2 59 0 1 777 1044 8 0 8 chrUextra 25173848 25173973 -3830683 + MICROPIA_I LTR Gypsy 512 635 -3841 1 777 4370 12 0 0 chrUextra 25173964 25174479 -3830177 + MICROPIA_I LTR Gypsy 744 1258 -3218 1 777 4315 2 0 46 chrUextra 25174580 25175128 -3829528 - LSU-rRNA_Dme rRNA rRNA -3377 523 1 1 777 21 95 0 0 chrUextra 25175140 25175203 -3829453 + AT_rich Low_complexity Low_complexity 1 63 0 1 777 2594 170 19 27 chrUextra 25175312 25175941 -3828715 + SAR_DM Satellite Satellite 185 808 -664 1 777 2723 160 46 13 chrUextra 25176043 25176671 -3827985 + SAR_DM Satellite Satellite 346 994 -478 1 777 5104 27 0 2 chrUextra 25176772 25177402 -3827254 - R1_DM LINE R1 -2115 3241 2613 1 777 844 35 0 9 chrUextra 25177503 25177618 -3827038 - NTS_DM Other Other -89 151 38 1 777 870 9 0 27 chrUextra 25177618 25177730 -3826926 - NTS_DM Other Other -107 133 25 1 777 22 56 0 0 chrUextra 25177756 25177792 -3826864 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25177805 25177845 -3826811 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25177888 25177928 -3826728 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25177980 25178020 -3826636 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 234 150 0 0 chrUextra 25178072 25178112 -3826544 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 756 93 0 0 chrUextra 25178234 25178352 -3826304 - ARS406_DM Unknown Unknown -235 118 1 1 777 2582 188 5 7 chrUextra 25178256 25178865 -3825791 + SAR_DM Satellite Satellite 192 799 -673 1 777 1222 18 0 12 chrUextra 25178985 25179151 -3825505 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25179151 25179263 -3825393 - NTS_DM Other Other -107 133 25 1 777 1252 18 0 6 chrUextra 25179315 25179480 -3825176 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25179480 25179592 -3825064 - NTS_DM Other Other -107 133 25 1 777 1093 31 0 6 chrUextra 25179696 25179858 -3824798 + FW_DM LINE Jockey 4532 4692 0 1 777 254 29 0 0 chrUextra 25179865 25179899 -3824757 - R1_DM LINE R1 -3966 1390 1357 1 777 3208 35 49 2 chrUextra 25179899 25180327 -3824329 - R1_DM LINE R1 -4150 1206 759 1 777 4926 16 33 2 chrUextra 25181158 25181789 -3822867 - STALKER4_I LTR Gypsy -2716 3814 3164 1 777 4681 41 51 2 chrUextra 25181889 25182520 -3822136 - MDG1_I LTR Gypsy -3438 3158 2497 1 777 5382 2 0 0 chrUextra 25182620 25183251 -3821405 + ROO_I LTR Pao 6685 7315 -941 1 777 1620 51 0 2 chrUextra 25184086 25184689 -3819967 + (CAAGA)n Simple_repeat Simple_repeat 1 601 0 1 777 1513 0 25 15 chrUextra 25184813 25185016 -3819640 + NTS_DM Other Other 36 240 0 1 777 1679 0 0 0 chrUextra 25185016 25185217 -3819439 + NTS_DM Other Other 1 201 -39 1 777 840 9 0 35 chrUextra 25185269 25185382 -3819274 + NTS_DM Other Other 25 133 -107 1 777 492 32 0 0 chrUextra 25185382 25185444 -3819212 + NTS_DM Other Other 38 99 -141 1 777 2826 144 14 37 chrUextra 25185544 25186166 -3818490 - SAR_DM Satellite Satellite -539 933 326 1 777 5193 3 0 0 chrUextra 25186275 25186877 -3817779 + R1_DM LINE R1 4755 5356 0 1 777 247 32 0 0 chrUextra 25186875 25186906 -3817750 + LSU-rRNA_Dme rRNA rRNA 2640 2670 -1230 1 777 2527 189 5 21 chrUextra 25187009 25187631 -3817025 + SAR_DM Satellite Satellite 507 1118 -354 1 777 46 83 0 0 chrUextra 25188201 25188310 -3816346 + AT_rich Low_complexity Low_complexity 1 109 0 1 777 21 57 0 0 chrUextra 25188505 25188540 -3816116 + AT_rich Low_complexity Low_complexity 1 35 0 1 777 1252 18 0 6 chrUextra 25188540 25188705 -3815951 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25188705 25188817 -3815839 - NTS_DM Other Other -107 133 25 1 777 1252 18 0 6 chrUextra 25188869 25189034 -3815622 - NTS_DM Other Other -39 201 38 1 777 488 15 0 0 chrUextra 25189034 25189099 -3815557 - NTS_DM Other Other -107 133 69 1 777 587 0 0 0 chrUextra 25189930 25189997 -3814659 + R1_DM LINE R1 5290 5356 0 1 777 4930 3 0 0 chrUextra 25189995 25190561 -3814095 + LSU-rRNA_Dme rRNA rRNA 2640 3205 -695 1 777 3001 157 13 9 chrUextra 25191392 25192023 -3812633 - SAR_DM Satellite Satellite -450 1022 390 1 777 638 28 36 36 chrUextra 25192123 25192234 -3812422 + NTS_DM Other Other 130 240 0 1 777 1756 17 17 17 chrUextra 25192234 25192474 -3812182 + NTS_DM Other Other 1 240 0 1 777 1690 30 17 17 chrUextra 25192474 25192714 -3811942 + NTS_DM Other Other 1 240 0 1 777 332 25 0 0 chrUextra 25192714 25192754 -3811902 + NTS_DM Other Other 1 40 -200 1 777 1150 7 0 0 chrUextra 25192926 25193061 -3811595 + 5S_DM RNA RNA 1 135 0 1 777 1176 0 0 0 chrUextra 25193285 25193420 -3811236 + 5S_DM RNA RNA 1 135 0 1 777 2753 174 24 11 chrUextra 25193588 25194216 -3810440 - SAR_DM Satellite Satellite -411 1061 426 1 777 1578 24 0 0 chrUextra 25194554 25194806 -3809850 + (TTCTC)n Simple_repeat Simple_repeat 1 252 0 1 777 1059 37 0 0 chrUextra 25194811 25194947 -3809709 + (GAGAA)n Simple_repeat Simple_repeat 2 137 0 1 777 28 48 0 0 chrUextra 25195333 25195375 -3809281 + AT_rich Low_complexity Low_complexity 1 42 0 1 777 5286 2 2 0 chrUextra 25195778 25196409 -3808247 - ROO_I LTR Pao -4143 4113 3482 1 777 2907 164 17 8 chrUextra 25196509 25197140 -3807516 + SAR_DM Satellite Satellite 392 1028 -444 1 777 5255 0 0 0 chrUextra 25197240 25197870 -3806786 + STALKER4_I LTR Gypsy 5595 6224 -306 1 777 962 184 24 11 chrUextra 25197970 25198591 -3806065 - SAR_DM Satellite Satellite -839 628 1 1 777 5273 11 16 0 chrUextra 25198700 25199330 -3805326 + DMRT1B LINE R1 2936 3575 -1608 1 777 2701 181 11 8 chrUextra 25199430 25200060 -3804596 + SAR_DM Satellite Satellite 284 915 -557 1 777 244 0 0 132 chrUextra 25200161 25200237 -3804419 + (CAAAAA)n Simple_repeat Simple_repeat 3 68 0 1 777 5124 24 5 0 chrUextra 25200890 25201520 -3803136 + R1_DM LINE R1 2323 2955 -2401 1 777 5257 2 2 0 chrUextra 25201649 25202250 -3802406 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 1 777 2694 0 0 0 chrUextra 25202350 25202665 -3801991 - NOMAD_LTR LTR Gypsy -203 315 1 1 777 551 7 130 7 chrUextra 25202684 25202978 -3801678 + (TA)n Simple_repeat Simple_repeat 1 330 0 1 777 379 105 0 0 chrUextra 25203082 25203139 -3801517 - Gypsy12_I LTR Gypsy -1529 4017 3961 1 777 3742 100 2 2 chrUextra 25203167 25203710 -3800946 - Gypsy12_I LTR Gypsy -2430 3116 2574 1 777 2658 156 24 13 chrUextra 25203843 25204440 -3800216 + SAR_DM Satellite Satellite 369 971 -501 1 777 1428 21 0 11 chrUextra 25204540 25204728 -3799928 - NTS_DM Other Other -54 186 1 1 777 1683 34 17 17 chrUextra 25204728 25204968 -3799688 - NTS_DM Other Other 0 240 1 1 777 1417 20 20 20 chrUextra 25204968 25205170 -3799486 - NTS_DM Other Other 0 240 39 1 777 5119 8 2 19 chrUextra 25206000 25206630 -3798026 - DOC LINE Jockey -3934 791 173 1 777 5392 2 0 2 chrUextra 25206739 25207360 -3797296 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2013 1 777 22 56 0 0 chrUextra 25207481 25207517 -3797139 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25207530 25207570 -3797086 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25207613 25207653 -3797003 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25207705 25207745 -3796911 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 22 56 0 0 chrUextra 25207750 25207786 -3796870 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 2029 0 0 0 chrUextra 25207858 25208090 -3796566 - LSU-rRNA_Dme rRNA rRNA 0 3900 3669 1 777 2742 178 11 9 chrUextra 25208190 25208820 -3795836 - SAR_DM Satellite Satellite -539 933 303 1 777 2932 175 6 5 chrUextra 25208920 25209550 -3795106 + SAR_DM Satellite Satellite 248 878 -594 1 777 2936 35 51 2 chrUextra 25209650 25210045 -3794611 - PROTOP DNA P -4066 414 1 1 777 5294 14 0 0 chrUextra 25210381 25211010 -3793646 - FW_DM LINE Jockey -3461 1231 603 1 777 2057 188 110 32 chrUextra 25211112 25211739 -3792917 - TAHRE LINE telomeric -597 9866 9191 1 777 5503 2 2 0 chrUextra 25211840 25212470 -3792186 + LSU-rRNA_Dme rRNA rRNA 3066 3696 -204 1 777 3659 68 11 26 chrUextra 25213300 25213921 -3790735 + FB4_DM DNA Tc1 2835 3446 -643 1 777 3698 50 9 9 chrUextra 25213363 25213930 -3790726 - FB4_DM DNA Tc1 -3079 1010 444 1 777 313 314 7 7 chrUextra 25214305 25214446 -3790210 - Invader3_I LTR Gypsy -1859 3029 2889 1 777 2506 188 5 24 chrUextra 25214760 25215388 -3789268 + SAR_DM Satellite Satellite 498 1113 -359 1 777 539 49 74 0 chrUextra 25215490 25215571 -3789085 - TART LINE telomeric -10708 3769 3683 1 777 2954 101 22 54 chrUextra 25215566 25216120 -3788536 - TART LINE telomeric -11115 3362 2827 1 777 5185 9 3 3 chrUextra 25216220 25216850 -3787806 - R1_DM LINE R1 -1106 4250 3621 1 777 976 110 11 11 chrUextra 25216954 25217129 -3787527 + SAR_DM Satellite Satellite 729 903 -569 1 777 1930 178 7 9 chrUextra 25217144 25217580 -3787076 + SAR_DM Satellite Satellite 496 930 -542 1 777 300 279 107 89 chrUextra 25217878 25218158 -3786498 - Invader1_LTR LTR Gypsy -55 368 84 1 777 630 0 0 0 chrUextra 25218970 25219040 -3785616 + (TTCTC)n Simple_repeat Simple_repeat 2 71 0 1 777 1505 0 6 0 chrUextra 25219140 25219314 -3785342 + LSU-rRNA_Dme rRNA rRNA 2467 2641 -1259 1 777 3663 0 5 0 chrUextra 25219345 25219770 -3784886 + R1_DM LINE R1 1 427 -4929 1 777 2615 188 8 7 chrUextra 25219870 25220481 -3784175 + SAR_DM Satellite Satellite 465 1076 -396 1 777 1931 189 19 5 chrUextra 25220616 25221197 -3783459 + SAR_DM Satellite Satellite 1 588 -645 1 777 3027 169 8 5 chrUextra 25221330 25221960 -3782696 - SAR_DM Satellite Satellite -584 888 257 1 777 5172 22 0 2 chrUextra 25222060 25222690 -3781966 - R1_DM LINE R1 -2615 2741 2113 1 777 5374 2 2 0 chrUextra 25222790 25223420 -3781236 - FW_DM LINE Jockey -2606 2086 1456 1 777 2486 184 22 10 chrUextra 25224980 25225583 -3779073 + SAR_DM Satellite Satellite 467 1076 -396 1 777 5125 36 0 0 chrUextra 25225710 25226340 -3778316 + R1_DM LINE R1 3100 3729 -1627 1 777 5397 0 0 2 chrUextra 25226440 25227070 -3777586 - LSU-rRNA_Dme rRNA rRNA -2751 1149 521 1 777 5115 27 0 2 chrUextra 25227170 25227800 -3776856 + STALKER4_I LTR Gypsy 4169 4797 -1733 1 777 602 129 0 38 chrUextra 25227900 25228005 -3776651 - Gypsy12_I LTR Gypsy -3943 1603 1503 1 777 3254 91 44 25 chrUextra 25228012 25228530 -3776126 - Gypsy12_I LTR Gypsy -3992 1554 1027 1 777 2382 90 48 6 chrUextra 25228631 25229260 -3775396 - DMSAT6 Satellite Satellite -82 654 1 1 777 4541 3 5 78 chrUextra 25229360 25229990 -3774666 + LSU-rRNA_Dme rRNA rRNA 1260 1843 -2057 1 777 360 94 62 0 chrUextra 25230090 25230154 -3774502 - TART LINE telomeric -4186 10291 10224 1 777 3036 101 172 13 chrUextra 25230157 25230709 -3773947 - TART LINE telomeric -6638 7839 7200 1 777 5251 18 0 2 chrUextra 25230820 25231450 -3773206 - R1_DM LINE R1 -676 4680 4052 1 777 1426 176 13 9 chrUextra 25231550 25231866 -3772790 + SAR_DM Satellite Satellite 434 750 -722 1 777 2350 13 0 23 chrUextra 25231874 25232180 -3772476 - DOC2_DM LINE Jockey 0 4793 4495 1 777 2618 179 11 22 chrUextra 25232285 25232910 -3771746 + SAR_DM Satellite Satellite 1 618 -396 1 777 3942 141 0 0 chrUextra 25233016 25233640 -3771016 - Gypsy_I LTR Gypsy -3459 3048 2425 1 777 401 0 0 57 chrUextra 25234470 25234523 -3770133 - NTS_DM Other Other -166 74 25 1 777 1252 18 0 6 chrUextra 25234575 25234740 -3769916 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25234740 25234852 -3769804 - NTS_DM Other Other -107 133 25 1 777 22 56 0 0 chrUextra 25234878 25234914 -3769742 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25234927 25234967 -3769689 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25235010 25235050 -3769606 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 3217 61 46 0 chrUextra 25235200 25235657 -3768999 + PROTOP_A DNA P 628 1105 0 1 777 2569 182 8 10 chrUextra 25235930 25236539 -3768117 - SAR_DM Satellite Satellite -673 799 192 1 777 720 103 0 0 chrUextra 25236443 25236560 -3768096 + ARS406_DM Unknown Unknown 1 117 -236 1 777 2510 190 11 11 chrUextra 25236660 25237272 -3767384 + SAR_DM Satellite Satellite 465 1076 -396 1 777 2612 176 14 18 chrUextra 25237390 25238020 -3766636 - SAR_DM Satellite Satellite -550 922 295 1 777 2780 173 9 9 chrUextra 25238120 25238749 -3765907 + SAR_DM Satellite Satellite 267 895 -577 1 777 1133 7 0 14 chrUextra 25238850 25238996 -3765660 - QUASIMODO_LTR LTR Gypsy -514 144 1 1 777 3797 2 0 0 chrUextra 25238996 25239480 -3765176 - QUASIMODO_I LTR Gypsy 0 6060 5577 1 777 5130 19 35 0 chrUextra 25240310 25240940 -3763716 + R1_DM LINE R1 3144 3795 -1561 1 777 5424 0 0 2 chrUextra 25241040 25241670 -3762986 - R1_DM LINE R1 -3320 2036 1408 1 777 2480 146 27 23 chrUextra 25241770 25242293 -3762363 + DMRT1B LINE R1 4633 5183 0 1 777 3889 121 3 2 chrUextra 25242500 25243130 -3761526 + S_DM DNA Tc1 918 1548 -188 1 777 1992 43 75 0 chrUextra 25243960 25244242 -3760414 + PROTOP_A DNA P 699 1001 -104 1 777 21 57 0 0 chrUextra 25244460 25244495 -3760161 + AT_rich Low_complexity Low_complexity 1 35 0 1 777 21 89 0 0 chrUextra 25244533 25244589 -3760067 + AT_rich Low_complexity Low_complexity 1 56 0 1 777 5411 2 0 0 chrUextra 25244692 25245320 -3759336 + R1_DM LINE R1 2799 3426 -1930 1 777 1744 179 17 13 chrUextra 25245420 25245466 -3759190 + SAR_DM Satellite Satellite 1 61 -1067 1 777 1086 75 0 0 chrUextra 25245466 25245627 -3759029 - ARS406_DM Unknown Unknown -164 189 29 1 777 1744 179 17 13 chrUextra 25245627 25246047 -3758609 + SAR_DM Satellite Satellite 62 630 -498 1 777 312 165 119 12 chrUextra 25246899 25247059 -3757597 + (TCTG)n Simple_repeat Simple_repeat 2 178 0 1 777 2720 168 14 11 chrUextra 25247612 25248239 -3756417 + SAR_DM Satellite Satellite 346 974 -498 1 777 34 24 0 0 chrUextra 25248367 25248408 -3756248 + AT_rich Low_complexity Low_complexity 1 41 0 1 777 21 95 0 0 chrUextra 25248621 25248684 -3755972 + AT_rich Low_complexity Low_complexity 1 63 0 1 777 1961 4 0 91 chrUextra 25248696 25248970 -3755686 + LSU-rRNA_Dme rRNA rRNA 1 249 -3651 1 777 3091 143 4 9 chrUextra 25249070 25249626 -3755030 + TAHRE LINE telomeric 9897 10449 -14 1 777 213 109 0 52 chrUextra 25249629 25249687 -3754969 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 1 777 4545 2 0 0 chrUextra 25249800 25250321 -3754335 + LSU-rRNA_Dme rRNA rRNA 2061 2581 -1319 1 777 974 0 0 0 chrUextra 25250319 25250430 -3754226 + R2_DM LINE R2 2558 2668 -939 1 777 942 15 0 0 chrUextra 25250532 25250663 -3753993 + FW_DM LINE Jockey 4559 4689 -3 1 777 3584 31 58 22 chrUextra 25250659 25251159 -3753497 - ROO_I LTR Pao -4051 4205 3688 1 777 3256 87 73 32 chrUextra 25251260 25251890 -3752766 + STALKER4_I LTR Gypsy 673 1328 -5202 1 777 2767 168 32 9 chrUextra 25251990 25252620 -3752036 - SAR_DM Satellite Satellite -446 1026 383 1 777 745 170 32 19 chrUextra 25252882 25253038 -3751618 + HETRP_DM Satellite Satellite 1518 1675 -197 1 777 1363 142 107 10 chrUextra 25253045 25253343 -3751313 - HOBO DNA hAT 0 3016 2690 1 777 766 21 10 0 chrUextra 25253450 25253546 -3751110 - SSU-rRNA_Dme rRNA rRNA -1898 97 1 1 777 30 0 0 0 chrUextra 25253680 25253710 -3750946 + AT_rich Low_complexity Low_complexity 1 30 0 1 777 28 48 0 0 chrUextra 25254038 25254080 -3750576 + AT_rich Low_complexity Low_complexity 1 42 0 1 777 4978 16 5 0 chrUextra 25254180 25254810 -3749846 + ACCORD2_I LTR Gypsy 6550 7182 -30 1 777 338 229 10 20 chrUextra 25255640 25255738 -3748918 + HETRP_DM Satellite Satellite 1568 1664 -208 1 777 192 40 0 0 chrUextra 25255901 25255926 -3748730 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 777 511 193 16 16 chrUextra 25255926 25256047 -3748609 + HETRP_DM Satellite Satellite 1549 1669 -203 1 777 323 159 0 104 chrUextra 25256191 25256268 -3748388 + HETRP_DM Satellite Satellite 1518 1586 -286 1 777 823 18 0 35 chrUextra 25256371 25256484 -3748172 - NTS_DM Other Other -107 133 25 1 777 1252 18 0 6 chrUextra 25256537 25256702 -3747954 - NTS_DM Other Other -39 201 38 1 777 840 9 0 35 chrUextra 25256702 25256815 -3747841 - NTS_DM Other Other -107 133 25 1 777 22 56 0 0 chrUextra 25256841 25256877 -3747779 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25256890 25256930 -3747726 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 2705 168 16 7 chrUextra 25257103 25257709 -3746947 + SAR_DM Satellite Satellite 326 937 -535 1 777 952 71 7 0 chrUextra 25257589 25257730 -3746926 - ARS406_DM Unknown Unknown -166 187 46 1 777 1620 8 0 0 chrUextra 25257830 25258201 -3746455 + (CACAA)n Simple_repeat Simple_repeat 1 371 0 1 777 1089 86 0 0 chrUextra 25258220 25258383 -3746273 + (CACAA)n Simple_repeat Simple_repeat 2 164 0 1 777 271 243 0 0 chrUextra 25258383 25258453 -3746203 + (CACAT)n Simple_repeat Simple_repeat 5 74 0 1 777 5452 2 2 2 chrUextra 25258560 25259190 -3745466 - SSU-rRNA_Dme rRNA rRNA -686 1309 680 1 777 4984 3 0 0 chrUextra 25259290 25259874 -3744782 + ROO_I LTR Pao 6066 6649 -1607 1 777 492 17 0 0 chrUextra 25259861 25259920 -3744736 + ROO_I LTR Pao 7444 7502 -754 1 777 2900 166 11 8 chrUextra 25260020 25260650 -3744006 + SAR_DM Satellite Satellite 371 1002 -470 1 777 1064 19 24 24 chrUextra 25261480 25261645 -3743011 + NTS_DM Other Other 76 240 0 1 777 1734 21 17 17 chrUextra 25261645 25261885 -3742771 + NTS_DM Other Other 1 240 0 1 777 1680 14 13 18 chrUextra 25261885 25262110 -3742546 + NTS_DM Other Other 1 224 -16 1 777 5304 9 0 2 chrUextra 25262210 25262839 -3741817 + R1_DM LINE R1 1887 2514 -2842 1 777 4994 30 0 0 chrUextra 25262939 25263567 -3741089 + MDG1_I LTR Gypsy 2278 2905 -3691 1 777 2404 196 6 24 chrUextra 25263668 25264295 -3740361 + SAR_DM Satellite Satellite 498 1113 -359 1 777 2321 102 11 25 chrUextra 25264408 25265026 -3739630 - DMSAT6 Satellite Satellite 0 609 1 1 777 5249 2 2 0 chrUextra 25265154 25265755 -3738901 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 1 777 5136 24 2 0 chrUextra 25266584 25267213 -3737443 - ROO_I LTR Pao -5520 2736 2107 1 777 2671 170 14 13 chrUextra 25267313 25267940 -3736716 - SAR_DM Satellite Satellite -503 969 342 1 777 5248 5 2 3 chrUextra 25268042 25268671 -3735985 + R1_DM LINE R1 3512 4139 -1217 1 777 2603 179 12 8 chrUextra 25268771 25269372 -3735284 - SAR_DM Satellite Satellite -675 797 195 1 777 691 124 0 0 chrUextra 25269279 25269400 -3735256 + ARS406_DM Unknown Unknown 1 121 -232 1 777 3940 32 12 0 chrUextra 25269500 25270002 -3734654 + FW_DM LINE Jockey 4185 4692 0 1 777 951 71 0 0 chrUextra 25270003 25270129 -3734527 - R1_DM LINE R1 -3963 1393 1268 1 777 4400 2 2 0 chrUextra 25270958 25271465 -3733191 - LSU-rRNA_Dme rRNA rRNA -1605 2295 1788 1 777 620 13 0 13 chrUextra 25271509 25271587 -3733069 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1712 1 777 2799 175 13 8 chrUextra 25271687 25272315 -3732341 + SAR_DM Satellite Satellite 299 929 -543 1 777 26 30 0 0 chrUextra 25272734 25272767 -3731889 + AT_rich Low_complexity Low_complexity 1 33 0 1 777 23 68 0 0 chrUextra 25272813 25272857 -3731799 + AT_rich Low_complexity Low_complexity 1 44 0 1 777 21 89 0 0 chrUextra 25272892 25272948 -3731708 + AT_rich Low_complexity Low_complexity 1 56 0 1 777 5051 32 13 0 chrUextra 25273145 25273774 -3730882 - R1_DM LINE R1 -3343 2013 1377 1 777 2723 185 8 5 chrUextra 25273874 25274503 -3730153 + SAR_DM Satellite Satellite 220 850 -622 1 777 1760 9 17 17 chrUextra 25275332 25275564 -3729092 - NTS_DM Other Other -8 232 1 1 777 1734 21 17 17 chrUextra 25275564 25275804 -3728852 - NTS_DM Other Other 0 240 1 1 777 991 20 25 25 chrUextra 25275804 25275961 -3728695 - NTS_DM Other Other 0 240 84 1 777 4962 13 2 0 chrUextra 25276061 25276690 -3727966 - PROTOP_A DNA P -240 865 236 1 777 291 216 135 91 chrUextra 25276803 25277120 -3727536 + Gypsy12A_LTR LTR Gypsy 1395 1727 -553 1 777 1859 55 18 35 chrUextra 25277134 25277419 -3727237 + Gypsy12_I LTR Gypsy 1 280 -5266 1 777 3011 158 11 11 chrUextra 25277520 25278148 -3726508 - SAR_DM Satellite Satellite -428 1044 417 1 777 5395 2 2 3 chrUextra 25278248 25278877 -3725779 - SSU-rRNA_Dme rRNA rRNA -635 1360 733 1 777 488 119 36 0 chrUextra 25279029 25279113 -3725543 - NTS_DM Other Other -150 90 4 1 777 1264 19 0 18 chrUextra 25279223 25279388 -3725268 - NTS_DM Other Other -78 162 1 1 777 1632 9 18 14 chrUextra 25279388 25279606 -3725050 - NTS_DM Other Other 0 240 22 1 777 5120 16 2 0 chrUextra 25279706 25280334 -3724322 + STALKER4_I LTR Gypsy 2499 3127 -3403 1 777 5374 0 3 2 chrUextra 25280438 25281060 -3723596 - SSU-rRNA_Dme rRNA rRNA -70 1925 1303 1 777 5147 9 3 0 chrUextra 25281164 25281793 -3722863 + STALKER4_I LTR Gypsy 1303 1933 -4597 1 777 2791 181 10 6 chrUextra 25281898 25282522 -3722134 - SAR_DM Satellite Satellite -543 929 304 1 777 2288 89 29 46 chrUextra 25282659 25283251 -3721405 - DMSAT6 Satellite Satellite -3 581 1 1 777 2939 35 3 0 chrUextra 25283351 25283724 -3720932 - R1_DM LINE R1 -424 4932 4559 1 777 2076 23 0 0 chrUextra 25283722 25283980 -3720676 - R1_DM LINE R1 -1270 4086 3829 1 777 4165 88 3 0 chrUextra 25284080 25284708 -3719948 + STALKER4_I LTR Gypsy 5596 6225 -305 1 777 5414 2 0 0 chrUextra 25284809 25285438 -3719218 - ROO_I LTR Pao -2662 5594 4966 1 777 4027 4 0 0 chrUextra 25285538 25286007 -3718649 + DMRT1B LINE R1 4414 4882 -301 1 777 1440 0 0 0 chrUextra 25286007 25286167 -3718489 + (CACAA)n Simple_repeat Simple_repeat 1 160 0 1 777 2367 118 21 6 chrUextra 25286996 25287625 -3717031 - DMSAT6 Satellite Satellite -71 638 1 1 777 2279 106 14 9 chrUextra 25287725 25288354 -3716302 - DMSAT6 Satellite Satellite -112 632 1 1 777 246 150 0 0 chrUextra 25288525 25288565 -3716091 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25288711 25288751 -3715905 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 22 56 0 0 chrUextra 25288756 25288792 -3715864 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 1920 0 0 0 chrUextra 25288864 25289083 -3715573 - LSU-rRNA_Dme rRNA rRNA 0 3900 3682 1 777 259 161 18 18 chrUextra 25289278 25289335 -3715321 - Gypsy8_LTR LTR Gypsy -1 303 247 1 777 23 0 0 0 chrUextra 25289787 25289810 -3714846 + AT_rich Low_complexity Low_complexity 1 23 0 1 777 2712 176 10 11 chrUextra 25289920 25290541 -3714115 - SAR_DM Satellite Satellite -569 903 284 1 777 246 150 0 0 chrUextra 25290660 25290700 -3713956 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 246 150 0 0 chrUextra 25290752 25290792 -3713864 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 246 150 0 0 chrUextra 25290844 25290884 -3713772 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 255 125 0 0 chrUextra 25290927 25290967 -3713689 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 22 56 0 0 chrUextra 25290980 25291016 -3713640 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 857 18 0 27 chrUextra 25291042 25291154 -3713502 + NTS_DM Other Other 25 133 -107 1 777 912 17 0 0 chrUextra 25291154 25291270 -3713386 + NTS_DM Other Other 38 153 -87 1 777 636 14 0 0 chrUextra 25291370 25291443 -3713213 + (TTGTG)n Simple_repeat Simple_repeat 3 75 0 1 777 999 98 6 0 chrUextra 25292099 25292263 -3712393 - ARS406_DM Unknown Unknown -188 165 1 1 777 798 184 15 19 chrUextra 25292100 25292305 -3712351 + SAR_DM Satellite Satellite 841 1044 -428 1 777 1825 167 12 12 chrUextra 25292321 25292727 -3711929 + SAR_DM Satellite Satellite 603 1008 -464 1 777 2148 118 11 35 chrUextra 25292830 25293457 -3711199 - DMSAT6 Satellite Satellite -28 612 1 1 777 2755 181 8 6 chrUextra 25293557 25294180 -3710476 - SAR_DM Satellite Satellite -603 869 246 1 777 287 87 0 0 chrUextra 25294140 25294186 -3710470 + ARS406_DM Unknown Unknown 1 46 -307 1 777 1103 89 40 13 chrUextra 25294286 25294541 -3710115 - Invader2_I LTR Gypsy -846 3746 3419 1 777 2860 32 8 3 chrUextra 25294541 25294915 -3709741 + IDEFIX_LTR LTR Gypsy 1 376 -218 1 777 3397 0 0 3 chrUextra 25295015 25295406 -3709250 + LSU-rRNA_Dme rRNA rRNA 3511 3900 0 1 777 22 56 0 0 chrUextra 25295478 25295514 -3709142 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 246 150 0 0 chrUextra 25295519 25295559 -3709097 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 5383 6 0 0 chrUextra 25295744 25296373 -3708283 - R1_DM LINE R1 -302 5054 4426 1 777 784 0 10 0 chrUextra 25296474 25296570 -3708086 + QUASIMODO_LTR LTR Gypsy 562 658 0 1 97 1136 250 33 26 chrUextra 25296649 25297076 -3707580 - FROGGER_I LTR Copia -86 1991 1562 1 778 5015 16 27 21 chrUextra 25297202 25297831 -3706825 - Gypsy6_I LTR Gypsy -1078 5934 5302 1 778 5355 8 3 0 chrUextra 25297931 25298560 -3706096 - Invader4_I LTR Gypsy -1304 1109 479 1 778 869 0 0 9 chrUextra 25298660 25298765 -3705891 + 5S_DM RNA RNA 32 135 0 1 778 1112 8 8 0 chrUextra 25299006 25299140 -3705516 + 5S_DM RNA RNA 1 135 0 1 778 3509 10 0 0 chrUextra 25299389 25299806 -3704850 + DM176_LTR LTR Gypsy 91 507 0 1 778 1660 5 0 5 chrUextra 25299817 25300018 -3704638 + DM176_LTR LTR Gypsy 1 200 -307 1 778 695 0 11 11 chrUextra 25300118 25300207 -3704449 + LSU-rRNA_Dme rRNA rRNA 1700 1788 -2112 1 778 4326 2 0 0 chrUextra 25300251 25300747 -3703909 + LSU-rRNA_Dme rRNA rRNA 1788 2283 -1617 1 778 2547 211 9 7 chrUextra 25300847 25301409 -3703247 - Gypsy_I LTR Gypsy -5493 1014 452 1 778 300 0 0 0 chrUextra 25301441 25301476 -3703180 - BS2 LINE Jockey -1105 3616 3582 1 778 4967 2 5 7 chrUextra 25301576 25302175 -3702481 + LSU-rRNA_Dme rRNA rRNA 1191 1788 -2112 1 778 4680 11 145 0 chrUextra 25302305 25302934 -3701722 - DOC2_DM LINE Jockey -873 3920 3201 1 778 1173 44 6 12 chrUextra 25303320 25303480 -3701176 - DIVER2_LTR LTR Pao 0 385 227 1 778 1620 0 0 3 chrUextra 25303763 25304145 -3700511 + (TATAA)n Simple_repeat Simple_repeat 1 381 0 1 778 2077 0 0 0 chrUextra 25304147 25304392 -3700264 - FW_DM LINE Jockey -2 4690 4446 1 778 996 123 0 0 chrUextra 25304492 25304647 -3700009 + (TA)n Simple_repeat Simple_repeat 1 155 0 1 778 3330 5 7 10 chrUextra 25304647 25305061 -3699595 + DM297_LTR LTR Gypsy 2 414 0 1 778 472 17 0 0 chrUextra 25305061 25305121 -3699535 + DM297_I LTR Gypsy 1 60 -6107 1 778 371 21 0 0 chrUextra 25305221 25305268 -3699388 + R1_DM LINE R1 5310 5356 0 1 778 3797 66 9 4 chrUextra 25305300 25305850 -3698806 + R1_DM LINE R1 1 602 -4754 1 778 4300 37 32 0 chrUextra 25305950 25306579 -3698077 - DOC2_DM LINE Jockey -3983 810 124 1 778 930 83 0 18 chrUextra 25306679 25306850 -3697806 + (CAAGA)n Simple_repeat Simple_repeat 5 172 0 1 778 1620 12 0 53 chrUextra 25306852 25307308 -3697348 + (CACGA)n Simple_repeat Simple_repeat 1 431 0 1 778 2314 92 21 36 chrUextra 25307416 25308037 -3696619 - DMSAT6 Satellite Satellite -3 611 1 1 778 21 0 0 0 chrUextra 25308357 25308378 -3696278 + AT_rich Low_complexity Low_complexity 1 21 0 1 778 42 57 0 0 chrUextra 25308552 25308622 -3696034 + AT_rich Low_complexity Low_complexity 1 70 0 1 778 513 81 0 11 chrUextra 25310324 25310411 -3694245 + MDG1_I LTR Gypsy 6119 6204 -392 1 778 588 81 28 183 chrUextra 25310404 25310657 -3693999 + MDG1_I LTR Gypsy 6395 6799 -98 1 778 1461 38 3 0 chrUextra 25310661 25310953 -3693703 + (TAA)n Simple_repeat Simple_repeat 1 292 0 1 778 264 330 0 16 chrUextra 25312150 25312332 -3692324 + (CTG)n Simple_repeat Simple_repeat 2 180 0 1 778 2890 168 8 3 chrUextra 25312516 25313130 -3691526 + SAR_DM Satellite Satellite 321 937 -535 1 778 880 83 6 22 chrUextra 25314698 25315326 -3689330 + RSP Satellite Satellite 1 618 0 1 778 1620 5 0 2 chrUextra 25315431 25315842 -3688814 + (GAGAA)n Simple_repeat Simple_repeat 1 410 0 1 778 661 185 6 50 chrUextra 25316307 25316466 -3688190 + HETRP_DM Satellite Satellite 1518 1669 -203 1 778 668 179 7 14 chrUextra 25316610 25316752 -3687904 + HETRP_DM Satellite Satellite 1529 1669 -203 1 778 2827 178 10 5 chrUextra 25316887 25317514 -3687142 - SAR_DM Satellite Satellite -593 879 250 1 778 2680 181 7 8 chrUextra 25317633 25318242 -3686414 - SAR_DM Satellite Satellite -396 1076 469 1 778 5283 0 3 2 chrUextra 25318344 25318972 -3685684 - ROO_I LTR Pao -3885 4371 3743 1 778 549 0 0 0 chrUextra 25319073 25319134 -3685522 + (TAA)n Simple_repeat Simple_repeat 2 62 0 1 778 1672 5 0 0 chrUextra 25319134 25319332 -3685324 - Copia2_LTR_DM LTR Copia 0 198 1 1 778 3053 8 0 0 chrUextra 25319332 25319701 -3684955 - Copia2_I LTR Copia 0 4162 3794 1 778 1756 17 17 17 chrUextra 25319801 25320041 -3684615 + NTS_DM Other Other 1 240 0 1 778 1734 21 17 17 chrUextra 25320041 25320281 -3684375 + NTS_DM Other Other 1 240 0 1 778 1204 14 0 0 chrUextra 25320281 25320428 -3684228 + NTS_DM Other Other 1 147 -93 1 778 1179 7 0 0 chrUextra 25320530 25320670 -3683986 - NTS_DM Other Other -100 140 1 1 778 1710 25 17 17 chrUextra 25320670 25320910 -3683746 - NTS_DM Other Other 0 240 1 1 778 1731 21 17 17 chrUextra 25320910 25321150 -3683506 - NTS_DM Other Other 0 240 1 1 778 690 0 0 0 chrUextra 25321258 25321337 -3683319 - DM297_LTR LTR Gypsy -335 79 1 1 778 4087 2 0 2 chrUextra 25321417 25321886 -3682770 + SSU-rRNA_Dme rRNA rRNA 1 468 -1527 1 778 4022 2 10 0 chrUextra 25321986 25322468 -3682188 - QUASIMODO_LTR LTR Gypsy -171 487 1 1 778 4025 30 0 0 chrUextra 25322839 25323342 -3681314 - PROTOP_A DNA P 0 1105 603 1 778 2433 169 40 32 chrUextra 25323442 25324066 -3680590 + SAR_DM Satellite Satellite 267 895 -577 1 778 2756 178 10 8 chrUextra 25324171 25324794 -3679862 + SAR_DM Satellite Satellite 424 1047 -425 1 778 22 70 0 0 chrUextra 25325011 25325054 -3679602 + AT_rich Low_complexity Low_complexity 1 43 0 1 778 1003 101 252 0 chrUextra 25325146 25325403 -3679253 + DNAREP1_DM LINE Penelope 273 594 0 1 778 459 0 0 0 chrUextra 25326931 25326982 -3677674 + (TTCTC)n Simple_repeat Simple_repeat 2 52 0 1 778 3714 7 2 2 chrUextra 25327082 25327518 -3677138 - R2_DM LINE R2 -3169 438 3 1 778 1253 0 0 0 chrUextra 25327568 25327710 -3676946 - LSU-rRNA_Dme rRNA rRNA -1323 2577 2436 1 778 331 291 28 21 chrUextra 25327810 25327954 -3676702 + Invader3_I LTR Gypsy 3066 3210 -1678 1 778 635 295 10 29 chrUextra 25328119 25328433 -3676223 + MDG3_I LTR Gypsy 3332 3639 -1347 1 778 880 74 3 20 chrUextra 25328545 25329166 -3675490 + RSP Satellite Satellite 1 610 0 1 778 280 29 0 0 chrUextra 25329994 25330029 -3674627 + SSU-rRNA_Dme rRNA rRNA 1961 1995 0 1 778 5486 2 0 0 chrUextra 25331450 25332078 -3672578 - SSU-rRNA_Dme rRNA rRNA -814 1181 554 1 778 4817 0 0 45 chrUextra 25332178 25332806 -3671850 + LSU-rRNA_Dme rRNA rRNA 175 774 -3126 1 778 5192 24 0 0 chrUextra 25332906 25333534 -3671122 - FW_DM LINE Jockey -774 3918 3291 1 778 2300 175 4 4 chrUextra 25333634 25334248 -3670408 + BATUMI_I LTR Pao 4043 4732 -3182 1 778 3154 7 0 9 chrUextra 25334362 25334787 -3669869 + HMSBEAGLE_I LTR Gypsy 376 796 -5733 1 778 974 29 52 12 chrUextra 25334787 25334959 -3669697 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 778 260 0 0 0 chrUextra 25334959 25334990 -3669666 + HMSBEAGLE_I LTR Gypsy 969 999 -5530 1 778 35 71 0 0 chrUextra 25335200 25335270 -3669386 + AT_rich Low_complexity Low_complexity 1 70 0 1 778 280 178 203 79 chrUextra 25335388 25335565 -3669091 + DNAREP1_DM LINE Penelope 16 214 -380 1 778 644 168 27 14 chrUextra 25335549 25335713 -3668943 - DNAREP1_DM LINE Penelope -262 332 117 1 778 476 240 0 8 chrUextra 25335957 25336079 -3668577 - HETRP_DM Satellite Satellite -203 1669 1549 1 778 210 37 0 0 chrUextra 25336079 25336106 -3668550 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 778 1895 5 5 0 chrUextra 25336224 25336446 -3668210 + Invader1_LTR LTR Gypsy 1 223 -200 1 778 4533 39 44 5 chrUextra 25336577 25337174 -3667482 + DMCR1A LINE CR1 1082 1701 -2769 1 778 3928 14 0 2 chrUextra 25337274 25337759 -3666897 - BATUMI_I LTR Pao -177 7786 7303 1 778 877 50 8 0 chrUextra 25337782 25337902 -3666754 + BATUMI_I LTR Pao 6427 6547 -1416 1 778 1479 0 6 0 chrUextra 25338002 25338182 -3666474 - NTS_DM Other Other -59 181 1 1 778 1815 8 17 13 chrUextra 25338182 25338421 -3666235 - NTS_DM Other Other 0 240 1 1 778 1429 20 19 24 chrUextra 25338421 25338630 -3666026 - NTS_DM Other Other 0 240 33 1 778 3291 12 52 2 chrUextra 25338730 25339156 -3665500 - IDEFIX_LTR LTR Gypsy -147 447 1 1 778 1635 5 0 5 chrUextra 25339156 25339358 -3665298 - IDEFIX_I LTR Gypsy 0 5628 5428 1 778 2766 161 19 10 chrUextra 25339465 25340084 -3664572 - SAR_DM Satellite Satellite -502 970 346 1 778 5086 25 13 0 chrUextra 25340186 25340814 -3663842 + R1_DM LINE R1 1724 2359 -2997 1 778 1026 69 0 0 chrUextra 25340914 25341058 -3663598 - R1_DM LINE R1 -4575 781 638 1 778 1208 60 6 0 chrUextra 25341056 25341223 -3663433 - R1_DM LINE R1 -5188 168 1 1 778 934 35 0 0 chrUextra 25341256 25341370 -3663286 - R1_DM LINE R1 0 5356 5243 1 778 1393 6 0 0 chrUextra 25341367 25341534 -3663122 - R1_DM LINE R1 -290 5066 4900 1 778 788 149 50 46 chrUextra 25341642 25341860 -3662796 + Stalker2_I LTR Gypsy 675 893 -6509 1 778 221 0 0 33 chrUextra 25342370 25342400 -3662256 + (CAAGA)n Simple_repeat Simple_repeat 1 29 0 1 778 1587 3 0 0 chrUextra 25342412 25342735 -3661921 + (CAAGA)n Simple_repeat Simple_repeat 1 323 0 1 778 254 136 0 22 chrUextra 25343124 25343169 -3661487 + LSU-rRNA_Dme rRNA rRNA 2581 2624 -1276 1 778 246 150 0 0 chrUextra 25343216 25343256 -3661400 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 778 255 125 0 0 chrUextra 25343299 25343339 -3661317 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 778 22 56 0 0 chrUextra 25343352 25343388 -3661268 + AT_rich Low_complexity Low_complexity 1 36 0 1 778 870 9 0 27 chrUextra 25343414 25343526 -3661130 + NTS_DM Other Other 25 133 -107 1 778 1252 18 0 6 chrUextra 25343526 25343691 -3660965 + NTS_DM Other Other 38 201 -39 1 778 4998 21 64 2 chrUextra 25344554 25345182 -3659474 + R1_DM LINE R1 1528 2194 -3162 1 778 1015 7 27 20 chrUextra 25345282 25345430 -3659226 + NTS_DM Other Other 92 240 0 1 778 1260 6 0 24 chrUextra 25345430 25345596 -3659060 + NTS_DM Other Other 1 162 -78 1 778 450 121 48 0 chrUextra 25345706 25345789 -3658867 + NTS_DM Other Other 4 90 -150 1 778 4962 30 3 2 chrUextra 25346010 25346638 -3658018 + NINJA_I LTR Pao 4012 4640 -1371 1 778 2470 86 11 29 chrUextra 25346738 25347366 -3657290 + DMSAT6 Satellite Satellite 1 617 -280 1 778 2617 184 10 11 chrUextra 25347466 25348088 -3656568 - SAR_DM Satellite Satellite -657 815 195 1 778 2374 171 60 13 chrUextra 25348201 25348822 -3655834 - SAR_DM Satellite Satellite -524 948 299 1 778 2504 177 16 18 chrUextra 25348922 25349533 -3655123 + SAR_DM Satellite Satellite 467 1076 -396 1 778 689 12 0 34 chrUextra 25349651 25349740 -3654916 - NTS_DM Other Other -130 110 25 1 778 1252 18 0 6 chrUextra 25349792 25349957 -3654699 - NTS_DM Other Other -39 201 38 1 778 870 9 0 27 chrUextra 25349957 25350069 -3654587 - NTS_DM Other Other -107 133 25 1 778 22 56 0 0 chrUextra 25350095 25350131 -3654525 + AT_rich Low_complexity Low_complexity 1 36 0 1 778 225 125 0 24 chrUextra 25350144 25350185 -3654471 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 778 2928 170 6 8 chrUextra 25350378 25351006 -3653650 + SAR_DM Satellite Satellite 411 1037 -435 1 778 4869 29 37 3 chrUextra 25351834 25352462 -3652194 + NINJA_I LTR Pao 1085 1733 -4278 1 778 992 32 0 146 chrUextra 25352563 25352745 -3651911 - BATUMI_I LTR Pao -807 7156 7002 1 778 3768 0 0 5 chrUextra 25352745 25353190 -3651466 - BATUMI_I LTR Pao 0 7963 7521 1 778 2780 183 8 6 chrUextra 25353290 25353918 -3650738 + SAR_DM Satellite Satellite 401 1029 -443 1 778 2264 85 3 41 chrUextra 25354018 25354646 -3650010 - DMSAT6 Satellite Satellite -84 604 1 1 778 1645 72 8 0 chrUextra 25354746 25354982 -3649674 - R1_DM LINE R1 -5118 238 1 1 778 3022 17 0 0 chrUextra 25355015 25355374 -3649282 - R1_DM LINE R1 0 5356 4998 1 778 2717 214 23 14 chrUextra 25355474 25356828 -3647828 + SAR_DM Satellite Satellite 1 1366 -514 1 778 1315 198 14 0 chrUextra 25357658 25357946 -3646710 - STALKER4_I LTR Gypsy -6004 526 235 1 778 31 58 0 0 chrUextra 25357947 25357999 -3646657 + AT_rich Low_complexity Low_complexity 1 52 0 1 778 1101 97 3 34 chrUextra 25358087 25358286 -3646370 - STALKER4_LTR LTR Gypsy -3 399 241 1 778 1620 0 0 0 chrUextra 25358805 25359011 -3645645 + (TAGA)n Simple_repeat Simple_repeat 1 206 0 1 778 2681 181 6 8 chrUextra 25359114 25359742 -3644914 - SAR_DM Satellite Satellite -641 831 205 1 778 192 40 0 0 chrUextra 25359909 25359934 -3644722 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 778 477 217 8 16 chrUextra 25359934 25360056 -3644600 + HETRP_DM Satellite Satellite 1549 1669 -203 1 778 659 180 13 51 chrUextra 25360200 25360358 -3644298 + HETRP_DM Satellite Satellite 1518 1669 -203 1 778 2735 178 27 8 chrUextra 25360570 25361198 -3643458 - SAR_DM Satellite Satellite -442 1030 391 1 778 2906 225 16 39 chrUextra 25361298 25362654 -3642002 + SAR_DM Satellite Satellite 1 1325 -569 1 778 25 0 0 0 chrUextra 25362781 25362806 -3641850 + AT_rich Low_complexity Low_complexity 1 25 0 1 778 21 0 0 0 chrUextra 25363178 25363199 -3641457 + AT_rich Low_complexity Low_complexity 1 21 0 1 778 4422 58 32 10 chrUextra 25363482 25364110 -3640546 + MDG1_I LTR Gypsy 90 731 -5865 1 778 2884 175 5 10 chrUextra 25364210 25364838 -3639818 + SAR_DM Satellite Satellite 409 1033 -439 1 778 1088 6 25 19 chrUextra 25364938 25365097 -3639559 + NTS_DM Other Other 81 240 0 1 778 1847 4 17 13 chrUextra 25365097 25365336 -3639320 + NTS_DM Other Other 1 240 0 1 778 1713 9 17 17 chrUextra 25365336 25365566 -3639090 + NTS_DM Other Other 1 230 -10 1 778 4927 38 5 3 chrUextra 25365667 25366294 -3638362 + R1_DM LINE R1 1305 1932 -3424 1 778 3581 7 0 54 chrUextra 25366394 25366858 -3637798 - LSU-rRNA_Dme rRNA rRNA -3461 439 1 1 778 21 95 0 0 chrUextra 25366870 25366933 -3637723 + AT_rich Low_complexity Low_complexity 1 63 0 1 778 2366 86 22 38 chrUextra 25367122 25367750 -3636906 + DMSAT6 Satellite Satellite 1 617 -97 1 778 2139 174 41 8 chrUextra 25367850 25368461 -3636195 - SAR_DM Satellite Satellite -837 630 1 1 778 2857 171 7 5 chrUextra 25369317 25369928 -3634728 + SAR_DM Satellite Satellite 326 937 -535 1 778 555 66 0 0 chrUextra 25370034 25370110 -3634546 + (TTCTC)n Simple_repeat Simple_repeat 5 80 0 1 778 4337 60 37 13 chrUextra 25370762 25371390 -3633266 - R1_DM LINE R1 -4562 794 152 1 778 5449 3 0 0 chrUextra 25371490 25372118 -3632538 - HETA LINE telomeric -4100 1981 1354 1 778 5504 2 0 0 chrUextra 25372218 25372846 -3631810 + LSU-rRNA_Dme rRNA rRNA 2786 3413 -487 1 778 2449 192 8 8 chrUextra 25372946 25373551 -3631105 - SAR_DM Satellite Satellite -673 799 195 1 778 727 103 0 0 chrUextra 25373458 25373574 -3631082 + ARS406_DM Unknown Unknown 1 116 -237 1 778 5200 24 2 0 chrUextra 25373674 25374302 -3630354 - R2_DM LINE R2 -632 2975 2347 1 778 4386 2 6 8 chrUextra 25374402 25374935 -3629721 + LSU-rRNA_Dme rRNA rRNA 1257 1788 -2112 1 778 444 0 0 0 chrUextra 25374979 25375030 -3629626 + LSU-rRNA_Dme rRNA rRNA 1788 1838 -2062 1 778 4718 2 6 0 chrUextra 25375858 25376405 -3628251 - SSU-rRNA_Dme rRNA rRNA -1445 550 1 1 778 3508 208 16 30 chrUextra 25377314 25378668 -3625988 - SAR_DM Satellite Satellite -852 1336 1 1 778 5200 6 8 0 chrUextra 25378770 25379398 -3625258 + DM176_I LTR Gypsy 740 1372 -5048 1 778 210 114 0 43 chrUextra 25379755 25379801 -3624855 + (AGTAG)n Simple_repeat Simple_repeat 4 47 0 1 778 1356 68 0 3 chrUextra 25379808 25380120 -3624536 + (GAGAA)n Simple_repeat Simple_repeat 1 311 0 1 778 2438 189 34 21 chrUextra 25380225 25380851 -3623805 + SAR_DM Satellite Satellite 262 895 -577 1 778 5302 10 0 0 chrUextra 25380952 25381579 -3623077 - STALKER4_I LTR Gypsy -4200 2330 1704 1 778 2837 125 50 26 chrUextra 25381679 25382303 -3622353 - TART LINE telomeric -4690 9787 9149 1 778 5062 22 3 2 chrUextra 25382406 25383033 -3621623 - R1_DM LINE R1 -1137 4219 3592 1 778 5208 14 0 0 chrUextra 25383133 25383760 -3620896 - DMRT1B LINE R1 -1994 3189 2563 1 778 5254 5 0 0 chrUextra 25383861 25384487 -3620169 + G6_DM LINE Jockey 33 658 -1384 1 778 368 0 0 0 chrUextra 25384587 25384636 -3620020 + NTS_DM Other Other 85 133 -107 1 778 1222 18 0 12 chrUextra 25384636 25384802 -3619854 + NTS_DM Other Other 38 201 -39 1 778 870 9 0 27 chrUextra 25384854 25384966 -3619690 + NTS_DM Other Other 25 133 -107 1 778 1252 18 0 6 chrUextra 25384966 25385131 -3619525 + NTS_DM Other Other 38 201 -39 1 778 21 57 0 0 chrUextra 25385131 25385166 -3619490 + AT_rich Low_complexity Low_complexity 1 35 0 1 778 3956 42 98 42 chrUextra 25385327 25385941 -3618715 - TRANSIB2 DNA Transib -624 2220 1573 1 778 1721 5 14 0 chrUextra 25386047 25386259 -3618397 - NTS_DM Other Other -25 215 1 1 778 1850 4 17 13 chrUextra 25386259 25386498 -3618158 - NTS_DM Other Other 0 240 1 1 778 1056 24 24 29 chrUextra 25386498 25386668 -3617988 - NTS_DM Other Other 0 240 72 1 778 1284 31 0 0 chrUextra 25386768 25386929 -3617727 + (GAGAA)n Simple_repeat Simple_repeat 4 164 0 1 778 453 16 0 15 chrUextra 25387495 25387560 -3617096 + NTS_DM Other Other 70 133 -107 1 778 1197 24 0 12 chrUextra 25387560 25387726 -3616930 + NTS_DM Other Other 38 201 -39 1 778 870 9 0 27 chrUextra 25387778 25387890 -3616766 + NTS_DM Other Other 25 133 -107 1 778 1252 18 0 6 chrUextra 25387890 25388055 -3616601 + NTS_DM Other Other 38 201 -39 1 778 21 57 0 0 chrUextra 25388055 25388090 -3616566 + AT_rich Low_complexity Low_complexity 1 35 0 1 778 632 155 0 8 chrUextra 25388222 25388339 -3616317 - ARS406_DM Unknown Unknown -237 116 1 1 778 2455 209 13 10 chrUextra 25388241 25388849 -3615807 + SAR_DM Satellite Satellite 191 800 -672 1 778 5400 24 2 3 chrUextra 25388949 25389576 -3615080 + R1_DM LINE R1 4333 4958 -398 1 778 1149 65 0 0 chrUextra 25390132 25390300 -3614356 + (TTCTC)n Simple_repeat Simple_repeat 4 171 0 1 778 5559 8 0 0 chrUextra 25390403 25391030 -3613626 + NINJA_I LTR Pao 746 1372 -4639 1 778 742 111 8 16 chrUextra 25391130 25391258 -3613398 - ARS406_DM Unknown Unknown -226 127 1 1 778 2729 182 15 11 chrUextra 25391150 25391757 -3612899 + SAR_DM Satellite Satellite 180 788 -684 1 778 2598 181 53 13 chrUextra 25391862 25392484 -3612172 - SAR_DM Satellite Satellite -354 1118 472 1 778 1799 187 6 6 chrUextra 25392585 25393210 -3611446 + SAR_DM Satellite Satellite 1 625 -545 1 778 5566 27 0 0 chrUextra 25393311 25393938 -3610718 + DIVER_I LTR Pao 2139 2765 -2878 1 778 3088 170 13 10 chrUextra 25394041 25394665 -3609991 + SAR_DM Satellite Satellite 332 957 -515 1 778 4137 4 0 0 chrUextra 25394765 25395218 -3609438 - R1_DM LINE R1 -104 5252 4800 1 778 1699 11 0 0 chrUextra 25395207 25395392 -3609264 - LSU-rRNA_Dme rRNA rRNA -1256 2644 2460 1 778 384 191 0 21 chrUextra 25395492 25395588 -3609068 + XDMR_DM Unknown Unknown 267 360 0 1 778 2726 177 15 23 chrUextra 25395502 25396119 -3608537 - SAR_DM Satellite Satellite -353 1119 508 1 778 28 79 0 0 chrUextra 25396595 25396658 -3607998 + AT_rich Low_complexity Low_complexity 1 63 0 1 778 23 68 0 0 chrUextra 25396689 25396733 -3607923 + AT_rich Low_complexity Low_complexity 1 44 0 1 778 26 30 0 0 chrUextra 25396779 25396812 -3607844 + AT_rich Low_complexity Low_complexity 1 33 0 1 778 2028 188 73 37 chrUextra 25396946 25397573 -3607083 - SAR_DM Satellite Satellite -558 649 1 1 778 222 151 13 27 chrUextra 25398754 25398829 -3605827 + (TAAA)n Simple_repeat Simple_repeat 4 77 0 1 778 22 94 0 0 chrUextra 25399262 25399326 -3605330 + AT_rich Low_complexity Low_complexity 1 64 0 1 778 3446 0 0 60 chrUextra 25399338 25399754 -3604902 + LSU-rRNA_Dme rRNA rRNA 1 391 -3509 1 778 2518 201 89 14 chrUextra 25400581 25401208 -3603448 + TAHRE LINE telomeric 391 1064 -9399 1 778 5503 18 0 2 chrUextra 25402035 25402662 -3601994 - R1_DM LINE R1 -3041 2315 1690 1 778 5084 23 5 19 chrUextra 25402762 25403389 -3601267 + IVK_DM LINE I 1387 2004 -3398 1 778 82 104 0 0 chrUextra 25403491 25403790 -3600866 + AT_rich Low_complexity Low_complexity 1 299 0 1 778 2112 222 12 8 chrUextra 25404219 25404843 -3599813 + G6_DM LINE Jockey 829 1426 -616 1 778 5535 2 2 0 chrUextra 25404944 25405570 -3599086 + G_DM LINE Jockey 1995 2621 -1725 1 778 406 311 49 20 chrUextra 25405707 25405953 -3598703 - Copia2_I LTR Copia -1458 2704 2452 1 778 522 0 0 0 chrUextra 25406397 25406455 -3598201 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 1 778 5671 2 0 2 chrUextra 25407124 25407751 -3596905 - R1_DM LINE R1 -3126 2230 1605 1 778 1620 29 0 0 chrUextra 25407852 25408477 -3596179 + (TCTTG)n Simple_repeat Simple_repeat 1 625 0 1 778 2572 100 27 19 chrUextra 25408613 25409205 -3595451 + DMSAT6 Satellite Satellite 1 596 0 1 778 2410 62 0 78 chrUextra 25409322 25409669 -3594987 - CIRCE LINE Composite -5064 1292 973 1 778 1085 16 0 0 chrUextra 25409811 25409932 -3594724 - CIRCE LINE Composite -5386 970 850 1 778 4430 2 4 0 chrUextra 25410032 25410511 -3594145 - SSU-rRNA_Dme rRNA rRNA -1514 481 1 1 778 349 158 56 112 chrUextra 25411278 25411385 -3593271 - Copia_I LTR Copia -80 4513 4413 1 778 5446 2 3 3 chrUextra 25411486 25412113 -3592543 + R1_DM LINE R1 606 1232 -4124 1 778 2608 193 42 8 chrUextra 25412213 25412840 -3591816 + SAR_DM Satellite Satellite 256 903 -569 1 778 2822 183 8 21 chrUextra 25412943 25413563 -3591093 - SAR_DM Satellite Satellite -361 1111 500 1 778 5102 4 4 2 chrUextra 25413736 25414294 -3590362 - LSU-rRNA_Dme rRNA rRNA 0 3900 3342 1 778 25 0 0 0 chrUextra 25414455 25414480 -3590176 + AT_rich Low_complexity Low_complexity 1 25 0 1 778 2108 68 24 29 chrUextra 25414700 25415020 -3589636 + IDEFIX_I LTR Gypsy 1 269 -5359 1 778 2821 187 8 21 chrUextra 25415121 25415748 -3588908 + SAR_DM Satellite Satellite 483 1101 -371 1 778 2462 36 63 0 chrUextra 25415854 25416157 -3588499 + DMCR1A LINE CR1 4149 4470 0 1 778 2775 28 0 0 chrUextra 25416156 25416475 -3588181 + DOC3_DM LINE Jockey 811 1129 -3611 1 778 960 83 5 19 chrUextra 25416575 25417202 -3587454 - RSP Satellite Satellite -36 618 1 1 778 279 206 0 0 chrUextra 25417302 25417365 -3587291 + XDMR Unknown Unknown 299 361 0 1 778 2698 177 11 31 chrUextra 25417310 25417927 -3586729 - SAR_DM Satellite Satellite -354 1118 514 1 778 5769 2 2 2 chrUextra 25418029 25418656 -3586000 - DOC LINE Jockey -828 3897 3271 1 778 5275 34 14 0 chrUextra 25418756 25419383 -3585273 + MAX_I LTR Pao 2723 3358 -4556 1 778 3103 25 0 8 chrUextra 25419483 25419848 -3584808 + PROTOP_A DNA P 744 1105 0 1 778 2301 8 0 0 chrUextra 25419848 25420110 -3584546 - ACCORD_I LTR Gypsy -328 5960 5699 1 778 2502 107 5 30 chrUextra 25420210 25420819 -3583837 - DMSAT6 Satellite Satellite -65 594 1 1 778 2991 176 10 10 chrUextra 25420939 25421559 -3583097 - SAR_DM Satellite Satellite -532 940 321 1 778 3849 0 0 0 chrUextra 25421666 25422076 -3582580 - LSU-rRNA_Dme rRNA rRNA -1703 2197 1788 1 778 1427 6 12 12 chrUextra 25422118 25422291 -3582365 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1619 1 778 2947 182 10 10 chrUextra 25422391 25423018 -3581638 - SAR_DM Satellite Satellite -645 827 201 1 778 1964 186 8 19 chrUextra 25423118 25423528 -3581128 + SAR_DM Satellite Satellite 1 540 -637 1 778 1116 82 0 0 chrUextra 25423528 25423686 -3580970 - ARS406_DM Unknown Unknown -195 158 1 1 778 1964 186 8 19 chrUextra 25423686 25423744 -3580912 + SAR_DM Satellite Satellite 541 619 -558 1 778 878 101 104 32 chrUextra 25423845 25423999 -3580657 - R1_DM LINE R1 -5191 165 1 1 778 2080 65 3 35 chrUextra 25424017 25424306 -3580350 + Gypsy6A_LTR LTR Gypsy 71 350 -70 1 778 1123 79 54 12 chrUextra 25424305 25424472 -3580184 - STALKER4_I LTR Gypsy -3666 2864 2691 1 778 2818 190 11 7 chrUextra 25424580 25425195 -3579461 + SAR_DM Satellite Satellite 180 797 -675 1 778 5829 3 0 0 chrUextra 25425299 25425926 -3578730 + LSU-rRNA_Dme rRNA rRNA 2195 2821 -1079 1 778 4747 62 13 8 chrUextra 25426033 25426653 -3578003 - R1_DM LINE R1 -3234 2122 1500 1 778 516 16 0 0 chrUextra 25426753 25426814 -3577842 + (TTCTC)n Simple_repeat Simple_repeat 5 65 0 1 97 2438 107 14 40 chrUextra 25427480 25428106 -3576550 + DMSAT6 Satellite Satellite 1 609 -64 1 779 3980 97 77 1 chrUextra 25428207 25428833 -3575823 + FW2_DM LINE Jockey 1434 1980 -1981 1 779 4807 92 2 0 chrUextra 25428934 25429561 -3575095 - Gypsy12_I LTR Gypsy -939 4607 3980 1 779 572 0 0 14 chrUextra 25429661 25429730 -3574926 + (CAAGA)n Simple_repeat Simple_repeat 5 72 0 1 779 1830 0 0 0 chrUextra 25430388 25430592 -3574064 - NTS_DM Other Other -36 204 1 1 779 1934 17 17 13 chrUextra 25430592 25430831 -3573825 - NTS_DM Other Other 0 240 1 1 779 1308 28 22 22 chrUextra 25430831 25431015 -3573641 - NTS_DM Other Other 0 240 57 1 779 31 0 0 0 chrUextra 25431115 25431146 -3573510 + AT_rich Low_complexity Low_complexity 1 31 0 1 779 4354 2 0 0 chrUextra 25431278 25431742 -3572914 + SSU-rRNA_Dme rRNA rRNA 1 464 -1531 1 779 5490 10 0 0 chrUextra 25431842 25432469 -3572187 + STALKER4_I LTR Gypsy 5630 6256 -274 1 779 3823 27 5 0 chrUextra 25432569 25433014 -3571642 - ROO_I LTR Pao -337 7919 7473 1 779 1430 18 0 0 chrUextra 25433025 25433196 -3571460 - ROO_I LTR Pao -1354 6902 6732 1 779 5634 6 2 2 chrUextra 25433296 25433923 -3570733 + R1_DM LINE R1 4585 5211 -145 1 779 5510 22 0 0 chrUextra 25434023 25434650 -3570006 - FW_DM LINE Jockey -3721 971 345 1 779 721 195 13 25 chrUextra 25434809 25434967 -3569689 - HETRP_DM Satellite Satellite -188 1684 1529 1 779 528 220 15 29 chrUextra 25435086 25435222 -3569434 - HETRP_DM Satellite Satellite -190 1682 1549 1 779 192 40 0 0 chrUextra 25435222 25435247 -3569409 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 779 5683 2 0 2 chrUextra 25436204 25436831 -3567825 + R1_DM LINE R1 3038 3663 -1693 1 779 2503 156 17 32 chrUextra 25436934 25437459 -3567197 + SAR_DM Satellite Satellite 293 809 -663 1 779 2661 83 15 21 chrUextra 25437658 25438274 -3566382 + DMSAT6 Satellite Satellite 1 611 -51 1 779 2683 187 13 11 chrUextra 25439112 25439729 -3564927 - SAR_DM Satellite Satellite -675 797 180 1 779 5063 14 2 6 chrUextra 25439839 25440466 -3564190 - FB4_DM DNA Tc1 -520 3569 2946 1 779 3126 169 16 8 chrUextra 25440566 25441188 -3563468 - SAR_DM Satellite Satellite -473 999 373 1 779 883 10 0 10 chrUextra 25442022 25442125 -3562531 + NTS_DM Other Other 32 133 -107 1 779 1528 15 20 25 chrUextra 25442125 25442329 -3562327 + NTS_DM Other Other 38 240 0 1 779 1873 21 17 17 chrUextra 25442329 25442569 -3562087 + NTS_DM Other Other 1 240 0 1 779 691 26 0 0 chrUextra 25442569 25442647 -3562009 + NTS_DM Other Other 1 78 -162 1 779 5626 11 0 0 chrUextra 25442747 25443374 -3561282 - FW_DM LINE Jockey -1691 3001 2375 1 779 3123 163 10 10 chrUextra 25443474 25444092 -3560564 - SAR_DM Satellite Satellite -486 986 369 1 779 4915 21 18 5 chrUextra 25444201 25444827 -3559829 - R1_DM LINE R1 -1040 4316 3683 1 779 32 0 0 0 chrUextra 25444955 25444987 -3559669 + AT_rich Low_complexity Low_complexity 1 32 0 1 779 3748 5 0 2 chrUextra 25445119 25445553 -3559103 + SSU-rRNA_Dme rRNA rRNA 1 433 -1562 1 779 5072 19 0 0 chrUextra 25446379 25447005 -3557651 - DM412 LTR Gypsy -481 6416 5791 1 779 2196 111 16 16 chrUextra 25447105 25447730 -3556926 - DMSAT6 Satellite Satellite -163 625 1 1 779 809 101 0 0 chrUextra 25447831 25447960 -3556696 - ARS406_DM Unknown Unknown -224 129 1 1 779 2465 182 14 15 chrUextra 25447867 25448457 -3556199 + SAR_DM Satellite Satellite 195 783 -689 1 779 2635 161 14 8 chrUextra 25448558 25449182 -3555474 + SAR_DM Satellite Satellite 371 1264 -208 1 779 313 250 118 100 chrUextra 25449587 25449867 -3554789 - Invader1_LTR LTR Gypsy -55 368 84 1 779 31 0 0 0 chrUextra 25450013 25450044 -3554612 + AT_rich Low_complexity Low_complexity 1 31 0 1 779 4009 2 2 0 chrUextra 25450176 25450635 -3554021 + SSU-rRNA_Dme rRNA rRNA 1 460 -1535 1 779 413 0 62 46 chrUextra 25450735 25450800 -3553856 + NTS_DM Other Other 175 240 0 1 779 1301 6 0 18 chrUextra 25450800 25450965 -3553691 + NTS_DM Other Other 1 162 -78 1 779 488 119 36 0 chrUextra 25451075 25451159 -3553497 + NTS_DM Other Other 4 90 -150 1 779 5475 2 2 0 chrUextra 25451461 25452087 -3552569 + SSU-rRNA_Dme rRNA rRNA 294 920 -1075 1 779 5244 0 2 2 chrUextra 25452211 25452813 -3551843 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 1 779 1150 7 0 0 chrUextra 25453095 25453230 -3551426 - 5S_DM RNA RNA 0 135 1 1 779 693 12 0 0 chrUextra 25453457 25453539 -3551117 - 5S_DM RNA RNA 0 135 54 1 779 2823 161 23 11 chrUextra 25453642 25454257 -3550399 + SAR_DM Satellite Satellite 282 903 -569 1 779 5352 0 2 5 chrUextra 25454365 25454991 -3549665 + SSU-rRNA_Dme rRNA rRNA 877 1500 -495 1 779 2845 172 6 6 chrUextra 25455094 25455715 -3548941 - SAR_DM Satellite Satellite -615 857 237 1 779 410 0 20 0 chrUextra 25456392 25456443 -3548213 - PROTOP_A DNA P -1 1104 1052 1 779 2827 168 11 10 chrUextra 25456545 25457169 -3547487 - SAR_DM Satellite Satellite -435 1037 413 1 779 180 0 0 0 chrUextra 25457269 25457289 -3547367 + (GAGAA)n Simple_repeat Simple_repeat 4 23 0 1 779 5127 19 2 0 chrUextra 25458721 25459347 -3545309 - STALKER4_I LTR Gypsy -4086 2444 1818 1 779 1548 0 0 0 chrUextra 25459447 25459619 -3545037 + (GAGAA)n Simple_repeat Simple_repeat 4 175 0 1 779 5430 0 3 0 chrUextra 25460175 25460799 -3543857 - LSU-rRNA_Dme rRNA rRNA -459 3441 2816 1 779 202 265 0 0 chrUextra 25460917 25460966 -3543690 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 779 2768 174 14 11 chrUextra 25461625 25462246 -3542410 + SAR_DM Satellite Satellite 267 889 -583 1 779 337 313 50 54 chrUextra 25462354 25462911 -3541745 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 779 586 138 0 0 chrUextra 25463077 25463186 -3541470 - ARS406_DM Unknown Unknown -244 109 1 1 779 2719 178 7 8 chrUextra 25463093 25463700 -3540956 + SAR_DM Satellite Satellite 195 800 -672 1 779 2172 121 8 24 chrUextra 25463805 25464428 -3540228 - DMSAT6 Satellite Satellite -30 612 1 1 779 2633 154 13 44 chrUextra 25464550 25465146 -3539510 + SAR_DM Satellite Satellite 326 903 -569 1 779 3516 0 2 0 chrUextra 25465255 25465659 -3538997 + LSU-rRNA_Dme rRNA rRNA 2248 2652 -1248 1 779 1605 0 5 5 chrUextra 25465686 25465878 -3538778 + R1_DM LINE R1 1 192 -5164 1 779 5050 14 8 0 chrUextra 25465981 25466607 -3538049 - G_DM LINE Jockey -1553 2793 2163 1 779 5113 11 0 2 chrUextra 25466707 25467333 -3537323 - DM176_I LTR Gypsy -1139 5281 4657 1 779 2274 136 25 28 chrUextra 25467434 25468049 -3536607 - DMSAT6 Satellite Satellite -28 613 1 1 779 4898 30 0 2 chrUextra 25468159 25468785 -3535871 - PROTOP_A DNA P -90 1015 391 1 779 1744 21 17 17 chrUextra 25468888 25469128 -3535528 + NTS_DM Other Other 1 240 0 1 779 1756 17 17 17 chrUextra 25469128 25469368 -3535288 + NTS_DM Other Other 1 240 0 1 779 1155 21 0 0 chrUextra 25469368 25469511 -3535145 + NTS_DM Other Other 1 143 -97 1 779 2341 98 45 34 chrUextra 25469611 25470237 -3534419 + DMSAT6 Satellite Satellite 1 633 -267 1 779 1364 20 20 25 chrUextra 25470337 25470539 -3534117 + NTS_DM Other Other 40 240 0 1 779 1850 4 17 13 chrUextra 25470539 25470778 -3533878 + NTS_DM Other Other 1 240 0 1 779 1543 5 0 0 chrUextra 25470778 25470963 -3533693 + NTS_DM Other Other 1 185 -55 1 779 569 190 42 7 chrUextra 25471070 25471213 -3533443 + Gypsy5_I LTR Gypsy 4409 4556 -1953 1 779 215 279 0 0 chrUextra 25471216 25471259 -3533397 + polypurine Low_complexity Low_complexity 4 46 0 1 779 766 201 11 43 chrUextra 25471274 25471645 -3533011 + GA-rich Low_complexity Low_complexity 1 358 0 1 779 2606 188 8 8 chrUextra 25471789 25472411 -3532245 + SAR_DM Satellite Satellite 274 895 -577 1 779 2706 44 57 3 chrUextra 25473499 25473867 -3530789 - PROTOP_A DNA P 0 1105 718 1 779 21 89 0 0 chrUextra 25474317 25474373 -3530283 + AT_rich Low_complexity Low_complexity 1 56 0 1 779 26 30 0 0 chrUextra 25474492 25474525 -3530131 + AT_rich Low_complexity Low_complexity 1 33 0 1 779 3337 44 48 0 chrUextra 25474695 25475149 -3529507 + PROTOP_A DNA P 630 1105 0 1 779 2805 157 46 11 chrUextra 25475420 25476045 -3528611 - SAR_DM Satellite Satellite -448 1024 378 1 779 2418 95 5 34 chrUextra 25476145 25476767 -3527889 + DMSAT6 Satellite Satellite 1 604 -69 1 779 4832 46 6 2 chrUextra 25476871 25477497 -3527159 - R1_DM LINE R1 -3657 1699 1071 1 779 2381 3 0 3 chrUextra 25477599 25477916 -3526740 + HMSBEAGLE_I LTR Gypsy 472 787 -5742 1 779 953 35 52 12 chrUextra 25477928 25478100 -3526556 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 779 1035 8 0 0 chrUextra 25478100 25478223 -3526433 + HMSBEAGLE_I LTR Gypsy 969 1091 -5438 1 779 2711 166 12 8 chrUextra 25478326 25478926 -3525730 - SAR_DM Satellite Satellite -625 847 246 1 779 391 95 0 0 chrUextra 25478886 25478949 -3525707 + ARS406_DM Unknown Unknown 1 63 -290 1 779 1620 0 0 0 chrUextra 25479049 25479286 -3525370 + (GAGAA)n Simple_repeat Simple_repeat 1 237 0 1 779 435 188 103 103 chrUextra 25479784 25480271 -3524385 - ROVER-I_DM LTR Gypsy -5967 617 131 1 779 192 77 0 0 chrUextra 25480300 25480326 -3524330 + (T)n Simple_repeat Simple_repeat 1 26 0 1 779 726 269 28 14 chrUextra 25481227 25481513 -3523143 - XDMR_DM Unknown Unknown -53 307 18 1 779 3369 251 35 28 chrUextra 25481261 25482537 -3522119 + SAR_DM Satellite Satellite 1 1284 -216 1 779 2705 3 0 0 chrUextra 25482679 25483000 -3521656 - Copia_I LTR Copia -527 4066 3746 1 779 2538 10 0 0 chrUextra 25482993 25483305 -3521351 - Copia_I LTR Copia -1031 3562 3251 1 779 3639 0 0 0 chrUextra 25483407 25483821 -3520835 + R2_DM LINE R2 3185 3598 -9 1 779 1851 9 0 0 chrUextra 25483817 25484031 -3520625 + LSU-rRNA_Dme rRNA rRNA 2578 2791 -1109 1 779 2622 172 13 13 chrUextra 25484150 25484757 -3519899 + SAR_DM Satellite Satellite 399 1005 -467 1 779 2793 159 15 8 chrUextra 25484869 25485477 -3519179 + SAR_DM Satellite Satellite 326 937 -535 1 779 2307 96 8 20 chrUextra 25485583 25486191 -3518465 - DMSAT6 Satellite Satellite -34 601 1 1 779 513 6 0 138 chrUextra 25486314 25486495 -3518161 + (TAAAAA)n Simple_repeat Simple_repeat 3 158 0 1 779 1146 279 15 22 chrUextra 25487845 25488384 -3516272 - SAR_DM Satellite Satellite -721 751 217 1 779 21 0 0 0 chrUextra 25488699 25488720 -3515936 + AT_rich Low_complexity Low_complexity 1 21 0 1 779 247 62 0 0 chrUextra 25488736 25488768 -3515888 - NTS_DM Other Other -207 33 2 1 779 34 24 0 0 chrUextra 25489568 25489609 -3515047 + AT_rich Low_complexity Low_complexity 1 41 0 1 779 4384 24 2 0 chrUextra 25489939 25490479 -3514177 - R1_DM LINE R1 -2394 2962 2422 1 779 689 24 0 0 chrUextra 25490480 25490565 -3514091 - ACCORD2_LTR LTR Gypsy -1 214 130 1 779 5472 5 0 0 chrUextra 25490665 25491291 -3513365 - SSU-rRNA_Dme rRNA rRNA -1203 792 167 1 779 5118 18 5 0 chrUextra 25491391 25492017 -3512639 + STALKER4_I LTR Gypsy 1763 2391 -4139 1 779 289 113 19 0 chrUextra 25492117 25492170 -3512486 - ARS406_DM Unknown Unknown -299 54 1 1 779 2294 188 10 6 chrUextra 25492130 25492743 -3511913 + SAR_DM Satellite Satellite 1 614 -677 1 779 5031 11 22 13 chrUextra 25492843 25493469 -3511187 - CIRCE LINE Composite -2223 4133 3502 1 779 49 0 0 0 chrUextra 25494110 25494159 -3510497 + AT_rich Low_complexity Low_complexity 1 49 0 1 779 4777 2 0 0 chrUextra 25494295 25494842 -3509814 - LSU-rRNA_Dme rRNA rRNA -1566 2334 1788 1 779 248 0 0 29 chrUextra 25494886 25494921 -3509735 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1755 1 779 1955 17 4 0 chrUextra 25495021 25495262 -3509394 + DIVER2_I LTR Pao 3906 4147 0 1 779 3099 34 3 0 chrUextra 25495262 25495646 -3509010 + DIVER2_LTR LTR Pao 1 385 0 1 779 3408 82 9 29 chrUextra 25496476 25497028 -3507628 + CIRCE LINE Composite 4440 4980 -1376 1 779 401 0 0 57 chrUextra 25497199 25497252 -3507404 - NTS_DM Other Other -166 74 25 1 779 22 56 0 0 chrUextra 25497278 25497314 -3507342 + AT_rich Low_complexity Low_complexity 1 36 0 1 779 225 125 0 24 chrUextra 25497327 25497368 -3507288 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 779 246 150 0 0 chrUextra 25497411 25497451 -3507205 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 779 246 150 0 0 chrUextra 25497503 25497543 -3507113 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 779 22 56 0 0 chrUextra 25497548 25497584 -3507072 + AT_rich Low_complexity Low_complexity 1 36 0 1 779 1464 6 0 0 chrUextra 25497656 25497825 -3506831 - LSU-rRNA_Dme rRNA rRNA 0 3900 3732 1 779 2418 67 18 31 chrUextra 25497925 25498308 -3506348 - Gypsy12_I LTR Gypsy -5168 378 1 1 779 314 211 34 34 chrUextra 25498322 25498469 -3506187 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 1 779 2706 181 10 5 chrUextra 25499382 25500000 -3504656 + SAR_DM Satellite Satellite 230 850 -622 1 779 378 171 40 0 chrUextra 25500266 25500342 -3504314 + NTS_DM Other Other 12 90 -150 1 779 28 48 0 0 chrUextra 25500616 25500658 -3503998 + AT_rich Low_complexity Low_complexity 1 42 0 1 779 2685 185 11 6 chrUextra 25500832 25501453 -3503203 - SAR_DM Satellite Satellite -593 879 256 1 779 2696 179 10 8 chrUextra 25501553 25502178 -3502478 - SAR_DM Satellite Satellite -554 918 293 1 779 2830 166 13 10 chrUextra 25503003 25503628 -3501028 + SAR_DM Satellite Satellite 379 1005 -467 1 779 2452 53 104 6 chrUextra 25503730 25504353 -3500303 + IDEFIX_I LTR Gypsy 1218 1901 -3727 1 779 2721 181 6 13 chrUextra 25504453 25505078 -3499578 + SAR_DM Satellite Satellite 297 917 -555 1 779 2833 30 0 0 chrUextra 25505178 25505517 -3499139 - TABOR_LTR LTR Gypsy -167 339 1 1 779 1554 21 0 0 chrUextra 25505521 25505803 -3498853 + (TTGTG)n Simple_repeat Simple_repeat 1 282 0 1 779 2824 144 25 17 chrUextra 25505936 25506528 -3498128 + SAR_DM Satellite Satellite 369 965 -507 1 779 3533 0 9 2 chrUextra 25507353 25507776 -3496880 + LSU-rRNA_Dme rRNA rRNA 1363 1788 -2112 1 779 1353 0 0 6 chrUextra 25507820 25507978 -3496678 + LSU-rRNA_Dme rRNA rRNA 1788 1944 -1956 1 779 4589 47 0 13 chrUextra 25508078 25508702 -3495954 + ACCORD2_I LTR Gypsy 2648 3263 -3949 1 779 4531 54 0 0 chrUextra 25509528 25510139 -3494517 - IDEFIX_I LTR Gypsy -4403 1225 615 1 779 5438 2 2 0 chrUextra 25510253 25510878 -3493778 + LSU-rRNA_Dme rRNA rRNA 2740 3365 -535 1 779 1247 19 0 7 chrUextra 25511377 25511532 -3493124 + (TTCTC)n Simple_repeat Simple_repeat 1 154 0 1 779 402 39 0 0 chrUextra 25511551 25511603 -3493053 + (GAGAA)n Simple_repeat Simple_repeat 1 52 0 1 779 28 48 0 0 chrUextra 25511974 25512016 -3492640 + AT_rich Low_complexity Low_complexity 1 42 0 1 779 2589 182 8 10 chrUextra 25512428 25513034 -3491622 - SAR_DM Satellite Satellite -673 799 195 1 779 618 134 0 9 chrUextra 25512940 25513053 -3491603 + ARS406_DM Unknown Unknown 1 112 -241 1 779 5376 3 0 0 chrUextra 25513153 25513778 -3490878 - R1_DM LINE R1 -1800 3556 2932 1 779 819 83 3 18 chrUextra 25513897 25514484 -3490172 + RSP Satellite Satellite 1 578 0 1 779 519 92 0 0 chrUextra 25514603 25514690 -3489966 + (ACATG)n Simple_repeat Simple_repeat 4 90 0 1 779 2563 176 34 8 chrUextra 25515329 25515946 -3488710 - SAR_DM Satellite Satellite -645 827 195 1 779 755 97 8 0 chrUextra 25516779 25516903 -3487753 - ARS406_DM Unknown Unknown -228 125 1 1 779 2553 175 14 8 chrUextra 25516810 25517403 -3487253 + SAR_DM Satellite Satellite 195 790 -682 1 779 3766 0 0 0 chrUextra 25517648 25518076 -3486580 + ROO_LTR LTR Pao 1 428 0 1 779 2149 219 13 14 chrUextra 25518954 25519578 -3485078 - SAR_DM Satellite Satellite -1089 623 1 1 779 2943 184 5 8 chrUextra 25519678 25520271 -3484385 + Gypsy5_I LTR Gypsy 3170 3760 -2749 1 779 1705 174 3 6 chrUextra 25520413 25520772 -3483884 + SAR_DM Satellite Satellite 546 903 -569 1 779 1006 95 0 0 chrUextra 25520779 25520937 -3483719 - ARS406_DM Unknown Unknown -195 158 1 1 779 923 221 0 4 chrUextra 25520787 25521028 -3483628 + SAR_DM Satellite Satellite 496 735 -737 1 779 5010 21 29 0 chrUextra 25521128 25521751 -3482905 - FW_DM LINE Jockey -1796 2896 2256 1 779 1005 20 26 20 chrUextra 25521853 25522004 -3482652 + NTS_DM Other Other 89 240 0 1 779 1847 4 17 13 chrUextra 25522004 25522243 -3482413 + NTS_DM Other Other 1 240 0 1 779 1279 12 0 18 chrUextra 25522243 25522408 -3482248 + NTS_DM Other Other 1 162 -78 1 779 1587 18 0 0 chrUextra 25522595 25522879 -3481777 + (GAGAA)n Simple_repeat Simple_repeat 1 284 0 1 779 5431 3 2 0 chrUextra 25523303 25523928 -3480728 + LSU-rRNA_Dme rRNA rRNA 2859 3484 -416 1 779 2872 166 10 10 chrUextra 25524028 25524653 -3480003 - SAR_DM Satellite Satellite -515 957 333 1 779 5390 8 0 0 chrUextra 25524753 25525378 -3479278 + Gypsy4_I LTR Gypsy 2813 3437 -2851 1 779 4854 31 13 8 chrUextra 25525478 25526103 -3478553 - CIRCE LINE Composite -3688 2668 2041 1 779 2952 0 0 0 chrUextra 25526203 25526547 -3478109 - LSU-rRNA_Dme rRNA rRNA -2896 1004 661 1 779 2448 3 3 0 chrUextra 25526543 25526828 -3477828 - SSU-rRNA_Dme rRNA rRNA -1669 326 41 1 779 4685 6 9 0 chrUextra 25526928 25527478 -3477178 - DMRT1B LINE R1 -1093 4090 3536 1 779 675 0 0 0 chrUextra 25527478 25527553 -3477103 + (CACAA)n Simple_repeat Simple_repeat 1 75 0 1 779 2081 108 48 42 chrUextra 25527653 25528092 -3476564 + Gypsy12_I LTR Gypsy 461 976 -4570 1 779 287 264 0 0 chrUextra 25528099 25528186 -3476470 + TOM_I LTR Gypsy 3276 3362 -2750 1 779 350 125 13 77 chrUextra 25528199 25528277 -3476379 + Gypsy12_LTR LTR Gypsy 1 73 -2263 1 779 49 0 0 0 chrUextra 25528698 25528747 -3475909 + AT_rich Low_complexity Low_complexity 1 49 0 1 779 870 9 0 27 chrUextra 25529115 25529227 -3475429 + NTS_DM Other Other 25 133 -107 1 779 1222 18 0 12 chrUextra 25529227 25529393 -3475263 + NTS_DM Other Other 38 201 -39 1 779 870 9 0 27 chrUextra 25529445 25529557 -3475099 + NTS_DM Other Other 25 133 -107 1 779 1252 18 0 6 chrUextra 25529557 25529722 -3474934 + NTS_DM Other Other 38 201 -39 1 779 820 92 0 37 chrUextra 25529828 25529964 -3474692 - DIVER_LTR LTR Pao -93 131 1 1 779 3888 41 2 0 chrUextra 25529964 25530453 -3474203 - DIVER_I LTR Pao 0 5643 5154 1 779 2158 110 50 17 chrUextra 25530569 25531173 -3473483 + DMSAT6 Satellite Satellite 1 624 -3 1 779 1524 22 0 0 chrUextra 25531516 25531696 -3472960 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 779 1104 89 0 0 chrUextra 25531720 25531900 -3472756 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 779 891 10 0 0 chrUextra 25532003 25532107 -3472549 - NTS_DM Other Other -136 104 1 1 779 1710 25 17 17 chrUextra 25532107 25532347 -3472309 - NTS_DM Other Other 0 240 1 1 779 1302 40 20 20 chrUextra 25532348 25532550 -3472106 - NTS_DM Other Other -1 239 38 1 779 626 0 0 0 chrUextra 25532550 25532628 -3472028 - NTS_DM Other Other -107 133 56 1 779 5478 0 0 2 chrUextra 25532728 25533353 -3471303 + Gypsy12_I LTR Gypsy 3953 4576 -970 1 779 5317 13 0 0 chrUextra 25533453 25534078 -3470578 - Gypsy4_I LTR Gypsy -3119 3169 2545 1 779 4851 5 5 0 chrUextra 25534178 25534803 -3469853 + ROVER-I_DM LTR Gypsy 5873 6500 -84 1 779 5434 3 0 0 chrUextra 25534903 25535528 -3469128 - LSU-rRNA_Dme rRNA rRNA -1098 2802 2178 1 779 2026 217 25 45 chrUextra 25536367 25536974 -3467682 + TAHRE LINE telomeric 7213 7807 -2656 1 779 320 91 18 0 chrUextra 25537078 25537133 -3467523 - ARS406_DM Unknown Unknown -297 56 1 1 779 2800 173 15 5 chrUextra 25537093 25537703 -3466953 + SAR_DM Satellite Satellite 246 861 -611 1 779 1317 6 27 16 chrUextra 25537805 25537990 -3466666 + NTS_DM Other Other 54 240 0 1 779 1821 8 17 13 chrUextra 25537990 25538229 -3466427 + NTS_DM Other Other 1 240 0 1 779 1264 12 0 18 chrUextra 25538229 25538394 -3466262 + NTS_DM Other Other 1 162 -78 1 779 2848 176 3 8 chrUextra 25538528 25539151 -3465505 + SAR_DM Satellite Satellite 251 870 -602 1 779 5166 2 0 2 chrUextra 25539282 25539878 -3464778 - LSU-rRNA_Dme rRNA rRNA -1267 2633 2039 1 779 3401 29 7 24 chrUextra 25539978 25540436 -3464220 + ROO_I LTR Pao 3756 4205 -4051 1 779 1256 24 0 0 chrUextra 25540433 25540603 -3464053 - FW_DM LINE Jockey 0 4692 4523 1 779 2266 54 28 22 chrUextra 25540703 25541025 -3463631 + R1_DM LINE R1 1920 2243 -3113 1 779 1005 69 7 0 chrUextra 25541181 25541326 -3463330 + Baggins1 LINE LOA 4791 4936 -517 1 779 2865 166 6 10 chrUextra 25541428 25542049 -3462607 + SAR_DM Satellite Satellite 438 1056 -416 1 779 3236 57 20 7 chrUextra 25542153 25542594 -3462062 - DMCR1A LINE CR1 -369 4101 3655 1 779 1346 94 0 0 chrUextra 25542587 25542778 -3461878 - DMCR1A LINE CR1 -950 3520 3330 1 779 4923 32 0 2 chrUextra 25542878 25543503 -3461153 - NINJA_I LTR Pao -129 5882 5259 1 779 5446 2 0 0 chrUextra 25543603 25544228 -3460428 + DOC LINE Jockey 3370 3994 -731 1 779 2758 183 8 5 chrUextra 25544328 25544950 -3459706 + SAR_DM Satellite Satellite 256 879 -593 1 779 5463 2 0 2 chrUextra 25545053 25545678 -3458978 + SSU-rRNA_Dme rRNA rRNA 182 805 -1190 1 779 2279 112 18 10 chrUextra 25545778 25546392 -3458264 - DMSAT6 Satellite Satellite -66 618 1 1 779 5415 2 2 0 chrUextra 25546504 25547128 -3457528 - LSU-rRNA_Dme rRNA rRNA -1319 2581 1957 1 779 363 105 18 0 chrUextra 25547232 25547289 -3457367 - HETRP_DM Satellite Satellite -286 1586 1529 1 779 612 199 6 50 chrUextra 25547423 25547582 -3457074 - HETRP_DM Satellite Satellite -203 1669 1518 1 779 674 186 7 7 chrUextra 25547698 25547839 -3456817 - HETRP_DM Satellite Satellite -203 1669 1529 1 779 1101 286 84 26 chrUextra 25547954 25548572 -3456084 + Invader2_I LTR Gypsy 3243 3896 -696 1 779 2575 78 14 10 chrUextra 25548678 25549303 -3455353 + DMSAT6 Satellite Satellite 1 628 -85 1 779 745 10 21 0 chrUextra 25549403 25549499 -3455157 + NTS_DM Other Other 36 133 -107 1 779 817 0 0 0 chrUextra 25549499 25549595 -3455061 + NTS_DM Other Other 38 133 -107 1 779 1408 20 20 20 chrUextra 25549595 25549798 -3454858 + NTS_DM Other Other 38 240 0 1 779 1657 18 18 18 chrUextra 25549798 25550027 -3454629 + NTS_DM Other Other 1 229 -11 1 779 5396 0 2 3 chrUextra 25550128 25550753 -3453903 + SSU-rRNA_Dme rRNA rRNA 1074 1697 -298 1 779 5104 24 0 0 chrUextra 25550853 25551478 -3453178 - R1_DM LINE R1 -3124 2232 1608 1 779 5082 29 0 0 chrUextra 25551578 25552203 -3452453 + R1_DM LINE R1 2702 3326 -2030 1 779 5400 0 3 2 chrUextra 25552303 25552927 -3451729 - SSU-rRNA_Dme rRNA rRNA -122 1873 1249 1 779 5349 0 0 2 chrUextra 25553028 25553653 -3451003 - MAX_I LTR Pao -6377 1537 914 1 779 2656 16 175 0 chrUextra 25553753 25554124 -3450532 + MDG3_I LTR Gypsy 4551 4986 0 1 779 2016 20 8 0 chrUextra 25554124 25554378 -3450278 + MDG3_LTR LTR Gypsy 1 256 -11 1 779 4660 33 66 0 chrUextra 25554478 25555103 -3449553 - R1_DM LINE R1 -2440 2916 2251 1 779 1532 160 8 13 chrUextra 25555226 25555822 -3448834 - SAR_DM Satellite Satellite -396 593 1 1 779 256 128 0 0 chrUextra 25555781 25555828 -3448828 + ARS406_DM Unknown Unknown 1 47 -306 1 779 802 9 9 36 chrUextra 25555945 25556057 -3448599 - NTS_DM Other Other -107 133 25 1 779 21 57 0 0 chrUextra 25556084 25556119 -3448537 + AT_rich Low_complexity Low_complexity 1 35 0 1 779 1252 18 0 6 chrUextra 25556119 25556284 -3448372 - NTS_DM Other Other -39 201 38 1 779 907 9 0 27 chrUextra 25556284 25556396 -3448260 - NTS_DM Other Other -107 133 25 1 779 652 39 0 19 chrUextra 25556448 25556553 -3448103 - NTS_DM Other Other -39 201 99 1 779 2755 233 3 3 chrUextra 25556655 25557278 -3447378 - TABOR_I LTR Gypsy -1822 4514 3892 1 779 877 90 26 6 chrUextra 25557765 25557921 -3446735 + (TTCTC)n Simple_repeat Simple_repeat 2 160 0 1 779 537 30 0 0 chrUextra 25557936 25558003 -3446653 + (GAGAA)n Simple_repeat Simple_repeat 3 69 0 1 779 2951 176 10 6 chrUextra 25558104 25558727 -3445929 - SAR_DM Satellite Satellite -561 911 287 1 97 2762 12 0 0 chrUextra 25558828 25559151 -3445505 + QUASIMODO_I LTR Gypsy 2631 2953 -3107 1 780 2466 3 7 0 chrUextra 25559163 25559453 -3445203 + QUASIMODO_I LTR Gypsy 3730 4021 -2039 1 780 5435 0 2 3 chrUextra 25559553 25560178 -3444478 + R1_DM LINE R1 608 1231 -4125 1 780 2868 178 10 10 chrUextra 25560279 25560902 -3443754 + SAR_DM Satellite Satellite 301 923 -549 1 780 243 0 0 0 chrUextra 25561003 25561030 -3443626 + (TTCTC)n Simple_repeat Simple_repeat 2 28 0 1 780 2401 120 13 28 chrUextra 25561730 25562353 -3442303 + DMSAT6 Satellite Satellite 1 613 -3 1 780 4926 24 0 45 chrUextra 25562453 25563078 -3441578 - CIRCE LINE Composite -5689 667 71 1 780 5331 10 6 3 chrUextra 25563178 25563803 -3440853 + QUASIMODO_I LTR Gypsy 1928 2554 -3506 1 780 4110 44 6 0 chrUextra 25563903 25564423 -3440233 - PROTOP_A DNA P -509 596 74 1 780 1233 133 121 44 chrUextra 25564629 25564968 -3439688 + STALKER4_I LTR Gypsy 799 1163 -5367 1 780 2327 7 0 7 chrUextra 25564969 25565253 -3439403 + STALKER4_I LTR Gypsy 1273 1554 -4976 1 780 2742 0 0 3 chrUextra 25565353 25565655 -3439001 - LSU-rRNA_Dme rRNA rRNA -1812 2088 1788 1 780 2386 4 7 4 chrUextra 25565699 25565978 -3438678 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1509 1 780 5685 0 2 2 chrUextra 25566802 25567426 -3437230 + LSU-rRNA_Dme rRNA rRNA 3177 3800 -100 1 780 28 48 0 0 chrUextra 25568533 25568575 -3436081 + AT_rich Low_complexity Low_complexity 1 42 0 1 780 1377 217 28 18 chrUextra 25568974 25569584 -3435072 + SAR_DM Satellite Satellite 1 616 -749 1 780 5341 22 0 0 chrUextra 25569698 25570322 -3434334 + NINJA_I LTR Pao 1885 2508 -3503 1 780 5590 2 2 3 chrUextra 25570422 25571046 -3433610 - SSU-rRNA_Dme rRNA rRNA -533 1462 840 1 780 3040 162 13 11 chrUextra 25571146 25571770 -3432886 + SAR_DM Satellite Satellite 390 1014 -458 1 780 1569 201 15 80 chrUextra 25571871 25572493 -3432163 + HETA LINE telomeric 3426 3946 -2135 1 780 26 30 0 0 chrUextra 25572964 25572997 -3431659 + AT_rich Low_complexity Low_complexity 1 33 0 1 780 2734 184 7 10 chrUextra 25573318 25573918 -3430738 - SAR_DM Satellite Satellite -680 792 195 1 780 733 111 0 0 chrUextra 25573825 25573942 -3430714 + ARS406_DM Unknown Unknown 1 117 -236 1 780 2660 185 7 23 chrUextra 25574042 25574655 -3430001 + SAR_DM Satellite Satellite 516 1118 -354 1 780 293 172 16 0 chrUextra 25574600 25574664 -3429992 - XDMR Unknown Unknown 0 361 297 1 780 2655 178 8 26 chrUextra 25574766 25575390 -3429266 - SAR_DM Satellite Satellite -359 1113 501 1 780 2163 104 110 0 chrUextra 25575490 25575836 -3428820 - DMCR1A LINE CR1 -500 3970 3587 1 780 792 52 326 0 chrUextra 25575833 25575968 -3428688 - DMCR1A LINE CR1 -1255 3215 3037 1 780 1181 29 7 0 chrUextra 25575974 25576114 -3428542 - DMCR1A LINE CR1 -1555 2915 2775 1 780 2788 3 0 0 chrUextra 25576938 25577259 -3427397 + ROO_I LTR Pao 3434 3754 -4502 1 780 2728 3 0 3 chrUextra 25577253 25577562 -3427094 + ROO_I LTR Pao 4134 4441 -3815 1 780 2783 181 13 11 chrUextra 25577663 25578285 -3426371 - SAR_DM Satellite Satellite -645 827 205 1 780 24 96 0 0 chrUextra 25579177 25579250 -3425406 + AT_rich Low_complexity Low_complexity 1 73 0 1 780 2913 179 8 8 chrUextra 25579837 25580458 -3424198 + SAR_DM Satellite Satellite 293 913 -559 1 780 372 306 66 64 chrUextra 25580655 25581171 -3423485 - BLASTOPIA_I LTR Gypsy -1885 2596 2080 1 780 5430 19 2 0 chrUextra 25581282 25581906 -3422750 - FW_DM LINE Jockey -491 4201 3577 1 780 2831 164 40 15 chrUextra 25582012 25582629 -3422027 - SAR_DM Satellite Satellite -514 958 326 1 780 1023 0 0 8 chrUextra 25582730 25582848 -3421808 - NTS_DM Other Other -123 117 1 1 780 1930 4 17 13 chrUextra 25582848 25583087 -3421569 - NTS_DM Other Other 0 240 1 1 780 1813 21 17 17 chrUextra 25583087 25583327 -3421329 - NTS_DM Other Other 0 240 1 1 780 568 40 0 0 chrUextra 25583454 25583528 -3421128 + R2_DM LINE R2 3534 3607 0 1 780 655 14 0 0 chrUextra 25583529 25583602 -3421054 + LSU-rRNA_Dme rRNA rRNA 2583 2655 -1245 1 780 3734 36 41 2 chrUextra 25583600 25584068 -3420588 + R1_DM LINE R1 4802 5287 -69 1 780 849 10 10 0 chrUextra 25584181 25584282 -3420374 + NTS_DM Other Other 32 133 -107 1 780 1304 18 0 6 chrUextra 25584282 25584447 -3420209 + NTS_DM Other Other 38 201 -39 1 780 907 9 0 27 chrUextra 25584499 25584611 -3420045 + NTS_DM Other Other 25 133 -107 1 780 1304 18 0 6 chrUextra 25584611 25584776 -3419880 + NTS_DM Other Other 38 201 -39 1 780 3218 204 0 5 chrUextra 25584902 25585526 -3419130 - ROVER-I_DM LTR Gypsy -3376 3208 2588 1 780 2429 91 27 10 chrUextra 25585626 25586250 -3418406 + DMSAT6 Satellite Satellite 1 635 -3 1 780 5576 0 0 2 chrUextra 25586350 25586974 -3417682 + ROO_I LTR Pao 3992 4614 -3642 1 780 2495 174 56 16 chrUextra 25587076 25587682 -3416974 - SAR_DM Satellite Satellite -645 827 198 1 780 444 140 58 29 chrUextra 25587595 25587698 -3416958 + ARS406_DM Unknown Unknown 1 106 -247 1 780 1902 0 0 0 chrUextra 25587798 25588008 -3416648 - R1_DM LINE R1 -316 5040 4831 1 780 3793 2 0 2 chrUextra 25588002 25588422 -3416234 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2238 1 780 962 58 3 18 chrUextra 25588532 25589119 -3415537 + RSP Satellite Satellite 1 578 0 1 780 5067 7 43 18 chrUextra 25589247 25589870 -3414786 + MAX_I LTR Pao 856 1494 -6420 1 780 2851 186 8 6 chrUextra 25589970 25590594 -3414062 + SAR_DM Satellite Satellite 293 917 -555 1 780 907 84 6 22 chrUextra 25590697 25591318 -3413338 - RSP Satellite Satellite -28 611 1 1 780 5636 0 2 2 chrUextra 25591418 25592042 -3412614 - LSU-rRNA_Dme rRNA rRNA -599 3301 2678 1 780 274 205 505 0 chrUextra 25592144 25592249 -3412407 - DM412 LTR Gypsy -5171 1726 1569 1 780 24 0 0 0 chrUextra 25592360 25592384 -3412272 + AT_rich Low_complexity Low_complexity 1 24 0 1 780 1358 107 22 41 chrUextra 25592448 25592763 -3411893 - DM412B_LTR LTR Gypsy -316 255 1 1 780 1112 181 45 8 chrUextra 25592866 25593490 -3411166 - SAR_DM Satellite Satellite -777 646 1 1 780 1428 0 21 16 chrUextra 25593590 25593777 -3410879 + NTS_DM Other Other 53 240 0 1 780 1940 0 17 13 chrUextra 25593777 25594016 -3410640 + NTS_DM Other Other 1 240 0 1 780 1690 10 0 0 chrUextra 25594016 25594214 -3410442 + NTS_DM Other Other 1 198 -42 1 780 3404 18 0 2 chrUextra 25594314 25594713 -3409943 + R1_DM LINE R1 3885 4282 -1074 1 780 1803 20 0 0 chrUextra 25594733 25594937 -3409719 + R1_DM LINE R1 4407 4610 -746 1 780 4450 93 0 0 chrUextra 25595038 25595662 -3408994 + TART_B1 LINE telomeric 965 1588 -9066 1 780 919 48 0 23 chrUextra 25595763 25595891 -3408765 + BATUMI_I LTR Pao 6627 6751 -1212 1 780 4073 32 2 10 chrUextra 25595884 25596386 -3408270 - BATUMI_I LTR Pao -4489 3474 2977 1 780 514 119 36 0 chrUextra 25596611 25596695 -3407961 + NTS_DM Other Other 4 90 -150 1 780 28 48 0 0 chrUextra 25596969 25597011 -3407645 + AT_rich Low_complexity Low_complexity 1 42 0 1 780 2295 179 51 8 chrUextra 25597299 25597829 -3406827 - SAR_DM Satellite Satellite -674 798 246 1 780 259 133 0 0 chrUextra 25597789 25597834 -3406822 + ARS406_DM Unknown Unknown 1 45 -308 1 780 5248 0 0 2 chrUextra 25597934 25598530 -3406126 - LSU-rRNA_Dme rRNA rRNA -3088 812 218 1 780 1888 0 9 13 chrUextra 25598658 25598889 -3405767 + LSU-rRNA_Dme rRNA rRNA 1559 1788 -2112 1 780 3216 0 0 0 chrUextra 25598933 25599282 -3405374 + LSU-rRNA_Dme rRNA rRNA 1788 2136 -1764 1 780 2840 180 11 10 chrUextra 25599382 25600006 -3404650 + SAR_DM Satellite Satellite 304 928 -544 1 780 22 0 0 0 chrUextra 25600414 25600436 -3404220 + AT_rich Low_complexity Low_complexity 1 22 0 1 780 4719 53 78 0 chrUextra 25600830 25601454 -3403202 - R1_DM LINE R1 -4455 901 229 1 780 930 8 30 23 chrUextra 25601558 25601691 -3402965 + NTS_DM Other Other 107 240 0 1 780 1820 17 17 17 chrUextra 25601691 25601931 -3402725 + NTS_DM Other Other 1 240 0 1 780 1811 21 17 17 chrUextra 25601931 25602171 -3402485 + NTS_DM Other Other 1 240 0 1 780 2509 116 8 22 chrUextra 25602278 25602902 -3401754 - DMSAT6 Satellite Satellite -24 615 1 1 780 406 350 25 45 chrUextra 25603279 25603593 -3401063 - Gypsy6_I LTR Gypsy -5228 1784 1477 1 780 672 200 14 14 chrUextra 25603815 25603962 -3400694 + HETRP_DM Satellite Satellite 1529 1675 -197 1 780 650 207 7 14 chrUextra 25604126 25604268 -3400388 + HETRP_DM Satellite Satellite 1529 1669 -203 1 780 5577 18 0 2 chrUextra 25604450 25605074 -3399582 + R2_DM LINE R2 1131 1753 -1854 1 780 5605 3 0 0 chrUextra 25605174 25605798 -3398858 + R1_DM LINE R1 2843 3466 -1890 1 780 794 11 0 0 chrUextra 25605900 25605992 -3398664 - BLASTOPIA_I LTR Gypsy -4389 92 1 1 780 2115 15 26 15 chrUextra 25605992 25606264 -3398392 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 780 1158 133 0 0 chrUextra 25606276 25606521 -3398135 + (TA)n Simple_repeat Simple_repeat 1 245 0 1 780 5663 0 5 0 chrUextra 25606622 25607246 -3397410 + LSU-rRNA_Dme rRNA rRNA 3180 3806 -94 1 780 5537 2 2 5 chrUextra 25607346 25607970 -3396686 + LSU-rRNA_Dme rRNA rRNA 997 1618 -2282 1 780 2638 89 15 30 chrUextra 25608070 25608671 -3395985 - DMSAT6 Satellite Satellite -82 592 1 1 780 2555 193 7 21 chrUextra 25608798 25609418 -3395238 + SAR_DM Satellite Satellite 496 1106 -366 1 780 418 328 30 30 chrUextra 25609623 25609868 -3394788 - Gypsy3_I LTR Gypsy -4812 1365 939 1 780 5059 35 8 5 chrUextra 25610242 25610866 -3393790 - CIRCE LINE Composite -2653 3703 3078 1 780 3519 81 71 28 chrUextra 25610971 25611590 -3393066 + STALKER4_I LTR Gypsy 782 1427 -5103 1 780 22 0 0 0 chrUextra 25611933 25611955 -3392701 + AT_rich Low_complexity Low_complexity 1 22 0 1 780 321 232 0 0 chrUextra 25612228 25612297 -3392359 + BS2 LINE Jockey 4146 4214 -507 1 780 2074 203 45 59 chrUextra 25612414 25613038 -3391618 - TAHRE LINE telomeric -2888 7575 6961 1 780 5598 3 2 2 chrUextra 25613138 25613762 -3390894 - R1_DM LINE R1 -1100 4256 3633 1 780 5785 3 0 0 chrUextra 25613862 25614486 -3390170 + LSU-rRNA_Dme rRNA rRNA 1921 2544 -1356 1 780 5360 29 0 0 chrUextra 25614586 25615210 -3389446 - R1_DM LINE R1 -2244 3112 2489 1 780 2936 75 88 122 chrUextra 25615310 25615934 -3388722 + PROTOP_B DNA P 502 1104 -49 1 780 3085 171 10 6 chrUextra 25616034 25616658 -3387998 + SAR_DM Satellite Satellite 346 971 -501 1 780 5417 30 0 2 chrUextra 25616758 25617382 -3387274 + DMCR1A LINE CR1 1899 2521 -1949 1 780 1079 210 20 4 chrUextra 25617482 25617731 -3386925 - Stalker2_I LTR Gypsy -6859 543 291 1 780 28 48 0 0 chrUextra 25617738 25617780 -3386876 + AT_rich Low_complexity Low_complexity 1 42 0 1 780 1604 78 3 34 chrUextra 25617868 25618106 -3386550 - STALKER4_LTR LTR Gypsy -3 399 173 1 780 1341 6 0 30 chrUextra 25618331 25618498 -3386158 - NTS_DM Other Other -78 162 1 1 780 1907 17 21 13 chrUextra 25618498 25618736 -3385920 - NTS_DM Other Other 0 240 1 1 780 684 0 43 32 chrUextra 25618736 25618830 -3385826 - NTS_DM Other Other 0 240 146 1 780 291 203 0 0 chrUextra 25618930 25618994 -3385662 + XDMR Unknown Unknown 298 361 0 1 780 2592 198 5 23 chrUextra 25618939 25619554 -3385102 - SAR_DM Satellite Satellite -354 1118 515 1 780 717 13 0 0 chrUextra 25619654 25619732 -3384924 - NTS_DM Other Other -162 78 1 1 780 1899 17 17 17 chrUextra 25619732 25619972 -3384684 - NTS_DM Other Other 0 240 1 1 780 1869 17 17 21 chrUextra 25619972 25620213 -3384443 - NTS_DM Other Other 0 240 1 1 780 451 0 62 46 chrUextra 25620213 25620278 -3384378 - NTS_DM Other Other 0 240 175 1 780 5168 24 42 3 chrUextra 25620378 25621002 -3383654 + R1_DM LINE R1 3334 3981 -1375 1 780 5778 0 2 2 chrUextra 25621102 25621726 -3382930 + SSU-rRNA_Dme rRNA rRNA 558 1181 -814 1 780 3203 170 10 5 chrUextra 25621828 25622450 -3382206 + SAR_DM Satellite Satellite 246 870 -602 1 780 1664 221 15 37 chrUextra 25622550 25623150 -3381506 - Invader4_I LTR Gypsy -2785 1691 1025 1 780 5643 13 0 2 chrUextra 25623274 25623898 -3380758 + Copia2_I LTR Copia 3245 3867 -295 1 780 4663 60 71 0 chrUextra 25623998 25624620 -3380036 - DM297_I LTR Gypsy -2556 3611 2946 1 780 1292 37 0 6 chrUextra 25624739 25624904 -3379752 - NTS_DM Other Other -39 201 38 1 780 906 9 0 35 chrUextra 25624904 25625017 -3379639 - NTS_DM Other Other -107 133 25 1 780 21 57 0 0 chrUextra 25625043 25625078 -3379578 + AT_rich Low_complexity Low_complexity 1 35 0 1 780 1350 18 0 6 chrUextra 25625078 25625243 -3379413 - NTS_DM Other Other -39 201 38 1 780 875 10 10 0 chrUextra 25625243 25625344 -3379312 - NTS_DM Other Other -107 133 32 1 780 3074 169 10 14 chrUextra 25625447 25626066 -3378590 - SAR_DM Satellite Satellite -645 827 212 1 780 693 0 0 0 chrUextra 25626170 25626247 -3378409 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 1 780 376 49 65 16 chrUextra 25626948 25627010 -3377646 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 780 990 173 102 15 chrUextra 25627009 25627214 -3377442 - DMLTR5 LTR Gypsy 0 266 44 1 780 2848 167 16 8 chrUextra 25628343 25628964 -3375692 + SAR_DM Satellite Satellite 1 625 -539 1 780 268 196 0 19 chrUextra 25629859 25629911 -3374745 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 780 278 176 0 19 chrUextra 25629942 25629994 -3374662 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 780 22 56 0 0 chrUextra 25630007 25630043 -3374613 + AT_rich Low_complexity Low_complexity 1 36 0 1 780 909 18 0 27 chrUextra 25630069 25630181 -3374475 + NTS_DM Other Other 25 133 -107 1 780 1330 24 0 6 chrUextra 25630181 25630346 -3374310 + NTS_DM Other Other 38 201 -39 1 780 2642 180 19 26 chrUextra 25630515 25631131 -3373525 + SAR_DM Satellite Satellite 507 1118 -354 1 780 5369 26 0 0 chrUextra 25631238 25631862 -3372794 - NINJA_I LTR Pao -4511 1500 877 1 780 5402 29 0 0 chrUextra 25631962 25632586 -3372070 - R1_DM LINE R1 -2021 3335 2712 1 780 4490 21 2 2 chrUextra 25632686 25633203 -3371453 + R1_DM LINE R1 4838 5354 -2 1 780 470 69 83 0 chrUextra 25633238 25633310 -3371346 + R1_DM LINE R1 1 78 -5278 1 780 2872 167 19 23 chrUextra 25633410 25634028 -3370628 - SAR_DM Satellite Satellite -611 861 246 1 780 2488 188 18 39 chrUextra 25634139 25634758 -3369898 - SAR_DM Satellite Satellite -353 1119 514 1 780 257 335 0 16 chrUextra 25634872 25635054 -3369602 + (CTG)n Simple_repeat Simple_repeat 2 180 0 1 780 242 342 0 0 chrUextra 25635100 25635252 -3369404 + (CTG)n Simple_repeat Simple_repeat 2 153 0 1 780 246 346 0 0 chrUextra 25635268 25635424 -3369232 + (CTG)n Simple_repeat Simple_repeat 1 156 0 1 780 5226 24 3 8 chrUextra 25636306 25636930 -3367726 - BATUMI_I LTR Pao -4532 3431 2811 1 780 1154 89 0 19 chrUextra 25637030 25637191 -3367465 + Gypsy7_I LTR Gypsy 2763 2920 -2064 1 780 4119 0 0 0 chrUextra 25637197 25637654 -3367002 + DOC LINE Jockey 625 1081 -3644 1 780 5613 22 0 0 chrUextra 25639202 25639826 -3364830 + Gypsy3_I LTR Gypsy 2591 3214 -2963 1 780 5666 8 5 0 chrUextra 25639926 25640550 -3364106 - MDG3_I LTR Gypsy -4051 935 309 1 780 1596 15 19 19 chrUextra 25640650 25640857 -3363799 + NTS_DM Other Other 34 240 0 1 780 1571 21 0 5 chrUextra 25640857 25641044 -3363612 + NTS_DM Other Other 1 186 -54 1 780 3505 42 29 7 chrUextra 25641374 25641825 -3362831 - HETA LINE telomeric -2292 3789 3329 1 780 1259 65 0 6 chrUextra 25641827 25641998 -3362658 + NINJA_I LTR Pao 5579 5748 -263 1 780 2917 181 24 10 chrUextra 25642822 25643442 -3361214 + SAR_DM Satellite Satellite 419 1047 -425 1 780 2800 186 11 22 chrUextra 25643547 25644170 -3360486 + SAR_DM Satellite Satellite 496 1111 -361 1 780 1488 22 0 0 chrUextra 25644270 25644450 -3360206 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 780 1455 67 3 3 chrUextra 25644453 25644754 -3359902 + (CTTAT)n Simple_repeat Simple_repeat 1 301 0 1 780 796 57 0 16 chrUextra 25644766 25644891 -3359765 + (CTTAT)n Simple_repeat Simple_repeat 1 123 0 1 780 553 0 0 0 chrUextra 25644993 25645052 -3359604 - LSU-rRNA_Dme rRNA rRNA -2055 1845 1787 1 780 4594 6 6 6 chrUextra 25645092 25645616 -3359040 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1268 1 780 5429 2 0 0 chrUextra 25645760 25646339 -3358317 + SSU-rRNA_Dme rRNA rRNA 1 579 -1416 1 780 2697 184 17 12 chrUextra 25646439 25647038 -3357618 - SAR_DM Satellite Satellite -676 796 195 1 780 749 95 8 8 chrUextra 25646945 25647062 -3357594 + ARS406_DM Unknown Unknown 1 117 -236 1 780 461 0 0 0 chrUextra 25647171 25647221 -3357435 - ROO_LTR LTR Pao -378 50 1 1 780 866 113 9 17 chrUextra 25647221 25647785 -3356871 - RSP Satellite Satellite -2 559 1 1 780 2920 175 8 21 chrUextra 25648612 25649231 -3355425 + SAR_DM Satellite Satellite 496 1106 -366 1 780 3768 77 10 8 chrUextra 25649337 25649954 -3354702 + G2_DM LINE Jockey 4 422 -2680 1 780 2478 104 23 23 chrUextra 25650056 25650677 -3353979 - DMSAT6 Satellite Satellite -158 621 1 1 780 2213 96 28 60 chrUextra 25650777 25651321 -3353335 + DMSAT6 Satellite Satellite 1 526 -82 1 780 2009 184 16 10 chrUextra 25651514 25651933 -3352723 + SAR_DM Satellite Satellite 1 568 -602 1 780 1084 101 0 0 chrUextra 25651933 25652091 -3352565 - ARS406_DM Unknown Unknown -195 158 1 1 780 2009 184 16 10 chrUextra 25652091 25652122 -3352534 + SAR_DM Satellite Satellite 569 612 -558 1 780 4718 62 0 5 chrUextra 25652949 25653569 -3351087 - BATUMI_I LTR Pao -6 7957 7341 1 780 2967 162 45 11 chrUextra 25653673 25654291 -3350365 + SAR_DM Satellite Satellite 378 1016 -456 1 780 5511 8 2 0 chrUextra 25654392 25655015 -3349641 + STALKER4_I LTR Gypsy 3218 3841 -2689 1 780 1522 0 0 11 chrUextra 25656281 25656461 -3348195 + (TTGTG)n Simple_repeat Simple_repeat 3 180 0 1 780 2432 102 11 31 chrUextra 25656564 25657184 -3347472 - DMSAT6 Satellite Satellite -94 607 1 1 780 2532 95 16 35 chrUextra 25657284 25657906 -3346750 + DMSAT6 Satellite Satellite 1 610 -285 1 780 3434 0 0 0 chrUextra 25658007 25658378 -3346278 + NOMAD_LTR LTR Gypsy 148 518 0 1 780 1533 16 0 0 chrUextra 25658387 25658630 -3346026 + (TTATA)n Simple_repeat Simple_repeat 1 243 0 1 780 5745 0 2 2 chrUextra 25658730 25659353 -3345303 - ROO_I LTR Pao -5490 2766 2144 1 780 2303 0 3 82 chrUextra 25659453 25659746 -3344910 - LSU-rRNA_Dme rRNA rRNA -3630 270 1 1 780 21 95 0 0 chrUextra 25659758 25659821 -3344835 + AT_rich Low_complexity Low_complexity 1 63 0 1 780 34 24 0 0 chrUextra 25660034 25660075 -3344581 + AT_rich Low_complexity Low_complexity 1 41 0 1 780 4562 35 18 0 chrUextra 25660178 25660723 -3343933 + MAX_I LTR Pao 2690 3244 -4670 1 780 592 29 0 0 chrUextra 25660724 25660792 -3343864 + MAX_I LTR Pao 3433 3500 -4414 1 780 3119 169 14 5 chrUextra 25660899 25661522 -3343134 + SAR_DM Satellite Satellite 409 1037 -435 1 780 198 71 0 0 chrUextra 25661622 25661650 -3343006 + (TTCTC)n Simple_repeat Simple_repeat 3 30 0 1 780 5226 16 3 23 chrUextra 25663068 25663688 -3340968 - BATUMI_I LTR Pao -5980 1983 1376 1 780 1691 0 0 0 chrUextra 25663791 25663972 -3340684 - TABOR_LTR LTR Gypsy -325 181 1 1 780 2594 56 2 42 chrUextra 25663970 25664414 -3340242 - TABOR_I LTR Gypsy 0 6336 5789 1 780 195 139 0 0 chrUextra 25664604 25664640 -3340016 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 780 186 71 0 0 chrUextra 25665064 25665092 -3339564 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1 780 5570 10 0 2 chrUextra 25665237 25665860 -3338796 + R1_DM LINE R1 2229 2850 -2506 1 780 5213 24 0 0 chrUextra 25665960 25666583 -3338073 + ACCORD2_I LTR Gypsy 6318 6940 -272 1 780 1055 24 0 0 chrUextra 25666683 25666806 -3337850 - HETA LINE telomeric -3320 2761 2639 1 780 4218 29 2 0 chrUextra 25666818 25667306 -3337350 - HETA LINE telomeric -4052 2029 1541 1 780 2502 173 14 31 chrUextra 25667406 25668026 -3336630 + SAR_DM Satellite Satellite 509 1118 -354 1 780 1539 0 0 0 chrUextra 25668129 25668300 -3336356 + (GAGAA)n Simple_repeat Simple_repeat 4 174 0 1 780 5145 13 0 2 chrUextra 25670298 25670921 -3333735 + R1_DM LINE R1 2482 3103 -2253 1 780 5164 13 10 0 chrUextra 25671021 25671644 -3333012 + FW_DM LINE Jockey 2451 3079 -1613 1 780 1746 195 93 51 chrUextra 25671750 25672355 -3332301 + TAHRE LINE telomeric 9352 9957 -506 1 780 796 0 0 0 chrUextra 25672467 25672559 -3332097 + MDG3_I LTR Gypsy 4895 4986 0 1 780 2020 26 4 50 chrUextra 25672559 25672839 -3331817 + MDG3_LTR LTR Gypsy 1 267 0 1 780 2039 12 0 0 chrUextra 25672839 25673088 -3331568 - FW_DM LINE Jockey -2929 1763 1515 1 780 5122 29 0 0 chrUextra 25673190 25673813 -3330843 + MAX_I LTR Pao 4143 4765 -3149 1 780 3266 22 22 0 chrUextra 25673913 25674320 -3330336 + R1_DM LINE R1 4651 5066 -290 1 780 943 35 0 0 chrUextra 25674317 25674431 -3330225 + R1_DM LINE R1 5243 5356 0 1 780 385 83 167 0 chrUextra 25674464 25674536 -3330120 + R1_DM LINE R1 1 84 -5272 1 780 948 87 96 77 chrUextra 25674636 25674912 -3329744 - TAHRE LINE telomeric -120 10343 10186 1 780 2142 78 134 0 chrUextra 25674915 25675259 -3329397 - TART LINE telomeric -6638 7839 7450 1 780 1193 72 0 6 chrUextra 25675359 25675526 -3329130 - HMSBEAGLE_I LTR Gypsy -4856 1673 1508 1 780 791 189 0 0 chrUextra 25675528 25675671 -3328985 - HMSBEAGLE_I LTR Gypsy -5175 1354 1212 1 780 371 68 17 0 chrUextra 25675783 25675842 -3328814 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 780 488 119 36 0 chrUextra 25676164 25676248 -3328408 - NTS_DM Other Other -150 90 4 1 780 1301 6 0 18 chrUextra 25676358 25676523 -3328133 - NTS_DM Other Other -78 162 1 1 780 1271 11 22 16 chrUextra 25676523 25676705 -3327951 - NTS_DM Other Other 0 240 58 1 780 3652 149 0 3 chrUextra 25676807 25677428 -3327228 - Gypsy5_I LTR Gypsy -2754 3755 3137 1 780 1365 300 16 18 chrUextra 25677528 25678142 -3326514 - G6_DM LINE Jockey -1068 974 362 1 780 2792 152 15 13 chrUextra 25678251 25678858 -3325798 - SAR_DM Satellite Satellite -539 933 326 1 780 3515 46 44 3 chrUextra 25678974 25679597 -3325059 + PROTOP DNA P 201 753 -3727 1 780 3060 156 8 10 chrUextra 25679697 25680320 -3324336 + SAR_DM Satellite Satellite 410 1031 -441 1 780 2331 101 10 8 chrUextra 25680420 25681043 -3323613 - DMSAT6 Satellite Satellite -254 623 1 1 780 3303 6 173 0 chrUextra 25681143 25681657 -3322999 + MDG1_I LTR Gypsy 6007 6799 -98 1 780 423 100 0 0 chrUextra 25681661 25681731 -3322925 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 780 294 0 0 0 chrUextra 25681731 25681766 -3322890 + MDG1_LTR LTR Gypsy 87 121 -321 1 780 2813 166 13 10 chrUextra 25681868 25682489 -3322167 - SAR_DM Satellite Satellite -549 923 301 1 780 4956 35 2 2 chrUextra 25682589 25683210 -3321446 - R1_DM LINE R1 -3349 2007 1387 1 780 2956 0 3 0 chrUextra 25683312 25683652 -3321004 - Invader1_LTR LTR Gypsy -82 341 1 1 780 2214 11 7 3 chrUextra 25683652 25683935 -3320721 - Invader1_I LTR Gypsy 0 3186 2903 1 780 5273 6 0 0 chrUextra 25684035 25684658 -3319998 - MDG3_I LTR Gypsy -1310 3676 3054 1 780 3922 87 2 42 chrUextra 25684758 25685381 -3319275 + Gypsy12_I LTR Gypsy 646 1243 -4303 1 780 245 136 0 22 chrUextra 25685481 25685526 -3319130 - DMLTR5 LTR Gypsy -179 87 44 1 780 321 274 107 89 chrUextra 25685735 25686015 -3318641 + Invader1_LTR LTR Gypsy 84 368 -55 1 780 5041 10 21 3 chrUextra 25686204 25686827 -3317829 + Invader2_I LTR Gypsy 422 1055 -3537 1 780 624 143 250 7 chrUextra 25687243 25687391 -3317265 - DNAREP1_DM LINE Penelope -388 206 23 1 780 213 39 0 0 chrUextra 25687391 25687417 -3317239 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 780 2174 104 13 34 chrUextra 25687650 25688273 -3316383 - DMSAT6 Satellite Satellite -181 609 1 1 780 647 73 0 0 chrUextra 25688373 25688469 -3316187 + ARS406_DM Unknown Unknown 63 158 -195 1 780 2567 159 6 6 chrUextra 25688476 25688996 -3315660 - SAR_DM Satellite Satellite -569 903 384 1 780 2565 178 8 10 chrUextra 25689097 25689694 -3314962 - SAR_DM Satellite Satellite -682 790 195 1 780 680 120 0 0 chrUextra 25689601 25689718 -3314938 + ARS406_DM Unknown Unknown 1 117 -236 1 97 1615 169 25 8 chrUextra 25689841 25690442 -3314214 + SAR_DM Satellite Satellite 1 611 -569 1 781 1355 71 0 0 chrUextra 25690542 25690725 -3313931 + CIRCE LINE Composite 1700 1882 -4474 1 781 596 304 34 55 chrUextra 25690721 25691139 -3313517 + Gypsy12_I LTR Gypsy 3822 4230 -1316 1 781 2783 31 6 19 chrUextra 25690804 25691164 -3313492 + CIRCE LINE Composite 1888 2242 -4114 1 781 2530 182 8 10 chrUextra 25691265 25691863 -3312793 - SAR_DM Satellite Satellite -684 788 192 1 781 790 91 0 0 chrUextra 25691767 25691888 -3312768 + ARS406_DM Unknown Unknown 1 121 -232 1 781 2847 179 7 3 chrUextra 25691989 25692607 -3312049 + SAR_DM Satellite Satellite 272 891 -581 1 781 2651 189 11 5 chrUextra 25692711 25693334 -3311322 - SAR_DM Satellite Satellite -593 879 253 1 781 684 0 0 0 chrUextra 25693434 25693510 -3311146 + (CTAG)n Simple_repeat Simple_repeat 1 76 0 1 781 864 0 0 0 chrUextra 25693510 25693605 -3311051 + (CTATG)n Simple_repeat Simple_repeat 1 96 0 1 781 1587 22 0 0 chrUextra 25693605 25693964 -3310692 + (CTAG)n Simple_repeat Simple_repeat 1 359 0 1 781 401 33 0 11 chrUextra 25693964 25694057 -3310599 + (TCTA)n Simple_repeat Simple_repeat 1 91 0 1 781 2832 37 0 0 chrUextra 25694157 25694507 -3310149 - R1_DM LINE R1 -3605 1751 1402 1 781 2151 57 3 0 chrUextra 25694498 25694780 -3309876 - R1_DM LINE R1 -3897 1459 1177 1 781 680 113 0 0 chrUextra 25694882 25694997 -3309659 - ARS406_DM Unknown Unknown -224 129 15 1 781 1705 120 70 0 chrUextra 25694997 25695297 -3309359 + MAX_LTR LTR Pao 1 321 0 1 781 1238 22 5 131 chrUextra 25695297 25695503 -3309153 + MAX_I LTR Pao 1 180 -7734 1 781 402 0 19 0 chrUextra 25695603 25695655 -3309001 + Invader4_I LTR Gypsy 2361 2413 0 1 781 3004 6 0 0 chrUextra 25695655 25696001 -3308655 + Invader4_LTR LTR Gypsy 1 346 0 1 781 4192 69 8 2 chrUextra 25696326 25696949 -3307707 - I_DM LINE I -1685 4546 3920 1 781 24 53 0 0 chrUextra 25697049 25697087 -3307569 + AT_rich Low_complexity Low_complexity 1 38 0 1 781 488 119 36 0 chrUextra 25697360 25697444 -3307212 - NTS_DM Other Other -150 90 4 1 781 806 9 8 34 chrUextra 25697554 25697672 -3306984 - NTS_DM Other Other -78 162 48 1 781 5438 3 0 0 chrUextra 25697772 25698395 -3306261 + LSU-rRNA_Dme rRNA rRNA 2593 3215 -685 1 781 5329 2 2 0 chrUextra 25698495 25699118 -3305538 - R1_DM LINE R1 -1806 3550 2927 1 781 2453 190 8 10 chrUextra 25699219 25699815 -3304841 + SAR_DM Satellite Satellite 473 1067 -405 1 781 5099 2 2 0 chrUextra 25699941 25700529 -3304127 - LSU-rRNA_Dme rRNA rRNA -1524 2376 1788 1 781 2857 170 8 5 chrUextra 25700668 25701278 -3303378 - SAR_DM Satellite Satellite -535 937 326 1 781 5173 0 0 2 chrUextra 25701387 25702010 -3302646 + ROO_I LTR Pao 2868 3489 -4767 1 781 4678 35 2 23 chrUextra 25702125 25702732 -3301924 - Baggins1 LINE LOA 0 5453 4860 1 781 2950 109 12 8 chrUextra 25702832 25703454 -3301202 + G2_DM LINE Jockey 4 371 -2731 1 781 427 248 111 38 chrUextra 25703852 25704167 -3300489 + G6_DM LINE Jockey 243 580 -1462 1 781 5052 18 0 3 chrUextra 25704998 25705620 -3299036 + NINJA_I LTR Pao 352 971 -5040 1 781 548 16 0 0 chrUextra 25705720 25705784 -3298872 - NTS_DM Other Other -176 64 1 1 781 1408 20 20 20 chrUextra 25705784 25705987 -3298669 - NTS_DM Other Other 0 240 38 1 781 795 10 0 0 chrUextra 25705987 25706083 -3298573 - NTS_DM Other Other -107 133 38 1 781 811 19 9 27 chrUextra 25706083 25706194 -3298462 - NTS_DM Other Other -107 133 25 1 781 21 57 0 0 chrUextra 25706220 25706255 -3298401 + AT_rich Low_complexity Low_complexity 1 35 0 1 781 553 35 0 11 chrUextra 25706255 25706342 -3298314 - NTS_DM Other Other -39 201 116 1 781 2918 169 8 8 chrUextra 25706442 25707064 -3297592 - SAR_DM Satellite Satellite -430 1042 421 1 781 4653 2 0 2 chrUextra 25707164 25707703 -3296953 + LSU-rRNA_Dme rRNA rRNA 2095 2632 -1268 1 781 686 0 12 0 chrUextra 25707703 25707786 -3296870 + R1_DM LINE R1 1 84 -5272 1 781 2724 174 10 8 chrUextra 25707886 25708499 -3296157 + SAR_DM Satellite Satellite 288 901 -571 1 781 5031 24 0 0 chrUextra 25708608 25709230 -3295426 - G2_DM LINE Jockey -447 2655 2034 1 781 4664 27 6 0 chrUextra 25709330 25709952 -3294704 + PROTOP_A DNA P 231 856 -249 1 781 5288 0 0 3 chrUextra 25710052 25710674 -3293982 - R1_DM LINE R1 -2030 3326 2707 1 781 4969 26 0 5 chrUextra 25712218 25712840 -3291816 + DMRT1B LINE R1 4161 4779 -404 1 781 2614 213 12 5 chrUextra 25712941 25713507 -3291149 - HMSBEAGLE_I LTR Gypsy -3538 2991 2422 1 781 2762 178 13 5 chrUextra 25713662 25714284 -3290372 + SAR_DM Satellite Satellite 224 850 -622 1 781 2858 165 11 10 chrUextra 25714384 25715002 -3289654 + SAR_DM Satellite Satellite 419 1037 -435 1 781 850 105 86 6 chrUextra 25715565 25715728 -3288928 - DMSAT6 Satellite Satellite -251 219 44 1 781 2740 172 8 11 chrUextra 25715828 25716444 -3288212 + SAR_DM Satellite Satellite 416 1029 -443 1 781 230 59 0 0 chrUextra 25716550 25716584 -3288072 + ARS406_DM Unknown Unknown 126 159 -194 1 781 2604 169 16 7 chrUextra 25716590 25717163 -3287493 - SAR_DM Satellite Satellite -569 903 326 1 781 2778 169 24 10 chrUextra 25717272 25717894 -3286762 - SAR_DM Satellite Satellite -457 1015 385 1 781 2874 216 2 2 chrUextra 25718716 25719338 -3285318 + Gypsy6_I LTR Gypsy 4362 4983 -2029 1 781 5267 6 10 0 chrUextra 25719438 25720060 -3284596 - DOC2_DM LINE Jockey -2421 2372 1745 1 781 2286 18 4 0 chrUextra 25720163 25720440 -3284216 + R1_DM LINE R1 4789 5066 -290 1 781 917 44 0 0 chrUextra 25720437 25720551 -3284105 + R1_DM LINE R1 5243 5356 0 1 781 1396 71 10 0 chrUextra 25720584 25720782 -3283874 + R1_DM LINE R1 1 200 -5156 1 781 2810 65 7 17 chrUextra 25721664 25722069 -3282587 - Baggins1 LINE LOA -262 5191 4791 1 781 366 318 24 24 chrUextra 25722606 25722945 -3281711 + TIRANT_I LTR Gypsy 3586 3735 -3957 1 781 1013 77 8 20 chrUextra 25723048 25723670 -3280986 + RSP Satellite Satellite 1 614 0 1 781 5283 20 11 21 chrUextra 25723770 25724392 -3280264 + FW_DM LINE Jockey 1916 2531 -2161 1 781 4658 44 2 2 chrUextra 25724492 25725061 -3279595 - R1_DM LINE R1 -4150 1206 638 1 781 395 73 0 0 chrUextra 25725059 25725114 -3279542 - R1_DM LINE R1 -5188 168 114 1 781 3001 165 20 8 chrUextra 25725219 25725829 -3278827 + SAR_DM Satellite Satellite 321 937 -535 1 781 5296 32 0 2 chrUextra 25725939 25726557 -3278099 - R1_DM LINE R1 -2630 2726 2110 1 781 952 0 0 0 chrUextra 25726658 25726761 -3277895 - MICROPIA_LTR LTR Gypsy -373 103 1 1 781 3586 13 0 4 chrUextra 25726761 25727280 -3277376 - MICROPIA_I LTR Gypsy 0 4476 3896 1 781 5618 8 11 0 chrUextra 25727380 25728002 -3276654 + R1_DM LINE R1 1369 1997 -3359 1 781 5556 14 0 0 chrUextra 25728102 25728724 -3275932 + TRANSIB2 DNA Transib 839 1460 -1384 1 781 5471 0 0 2 chrUextra 25728824 25729446 -3275210 + ROO_I LTR Pao 4622 5242 -3014 1 781 2670 92 23 13 chrUextra 25729547 25730167 -3274489 - DMSAT6 Satellite Satellite -414 626 1 1 781 292 149 70 60 chrUextra 25730268 25730368 -3274288 + XDMR_DM Unknown Unknown 260 360 0 1 781 2643 174 16 23 chrUextra 25730283 25730890 -3273766 - SAR_DM Satellite Satellite -354 1118 516 1 781 626 21 41 41 chrUextra 25730992 25731090 -3273566 + NTS_DM Other Other 143 240 0 1 781 1858 21 17 17 chrUextra 25731090 25731330 -3273326 + NTS_DM Other Other 1 240 0 1 781 1954 8 17 13 chrUextra 25731330 25731569 -3273087 + NTS_DM Other Other 1 240 0 1 781 400 0 0 0 chrUextra 25731569 25731612 -3273044 + NTS_DM Other Other 1 43 -197 1 781 2634 58 3 0 chrUextra 25732005 25732332 -3272324 + Baggins1 LINE LOA 4791 5118 -335 1 781 1121 92 0 7 chrUextra 25732434 25732587 -3272069 + Gypsy12_I LTR Gypsy 825 976 -4570 1 781 455 273 0 0 chrUextra 25732594 25732716 -3271940 + DM297_I LTR Gypsy 3337 3458 -2709 1 781 1545 194 18 29 chrUextra 25732716 25733056 -3271600 + Gypsy12_LTR LTR Gypsy 1 336 -2000 1 781 996 239 26 35 chrUextra 25733240 25733778 -3270878 - Gypsy11_I LTR Gypsy -140 3384 3074 1 781 1735 19 0 5 chrUextra 25733886 25734093 -3270563 - NTS_DM Other Other -34 206 1 1 781 1854 21 17 17 chrUextra 25734093 25734333 -3270323 - NTS_DM Other Other 0 240 1 1 781 1121 31 24 24 chrUextra 25734333 25734500 -3270156 - NTS_DM Other Other 0 240 74 1 781 5515 8 3 8 chrUextra 25735322 25735944 -3268712 - BATUMI_I LTR Pao -5356 2607 1989 1 781 2882 184 14 8 chrUextra 25736046 25736666 -3267990 + SAR_DM Satellite Satellite 369 992 -480 1 781 5263 2 3 5 chrUextra 25736766 25737388 -3267268 + TABOR_I LTR Gypsy 5472 6092 -244 1 781 2980 179 7 8 chrUextra 25737488 25738107 -3266549 + SAR_DM Satellite Satellite 305 922 -550 1 781 4039 30 0 2 chrUextra 25738210 25738687 -3265969 - NINJA_I LTR Pao -67 5944 5469 1 781 1276 14 0 7 chrUextra 25738687 25738832 -3265824 + PROTOP_A DNA P 1 144 -961 1 781 2622 111 131 6 chrUextra 25738936 25739554 -3265102 - TART LINE telomeric -6799 7678 7191 1 781 532 119 36 0 chrUextra 25739690 25739774 -3264882 - NTS_DM Other Other -150 90 4 1 781 1375 6 0 18 chrUextra 25739884 25740049 -3264607 - NTS_DM Other Other -78 162 1 1 781 1829 13 18 13 chrUextra 25740049 25740276 -3264380 - NTS_DM Other Other 0 240 13 1 781 5553 16 0 2 chrUextra 25740376 25740998 -3263658 - R1_DM LINE R1 -2964 2392 1772 1 781 2577 88 34 40 chrUextra 25741098 25741720 -3262936 - DMSAT6 Satellite Satellite -94 617 1 1 781 2177 159 25 21 chrUextra 25741821 25742442 -3262214 - SAR_DM Satellite Satellite -800 623 1 1 781 405 273 0 22 chrUextra 25742637 25743156 -3261500 + (CAA)n Simple_repeat Simple_repeat 1 507 0 1 781 3101 174 5 8 chrUextra 25743264 25743883 -3260773 + SAR_DM Satellite Satellite 440 1056 -416 1 781 2379 4 0 0 chrUextra 25744352 25744608 -3260048 + ROO_LTR LTR Pao 1 256 -172 1 781 3813 12 2 0 chrUextra 25744708 25745131 -3259525 + R1_DM LINE R1 4933 5356 0 1 781 1172 84 18 0 chrUextra 25745164 25745330 -3259326 + R1_DM LINE R1 1 169 -5187 1 781 956 102 8 22 chrUextra 25745434 25746052 -3258604 - RSP Satellite Satellite -11 609 1 1 781 2673 188 13 7 chrUextra 25746152 25746758 -3257898 - SAR_DM Satellite Satellite -683 789 180 1 781 824 98 0 0 chrUextra 25746652 25746774 -3257882 + ARS406_DM Unknown Unknown 1 122 -231 1 781 1524 42 0 3 chrUextra 25746874 25747449 -3257207 + (CTTAT)n Simple_repeat Simple_repeat 1 573 0 1 781 294 106 0 0 chrUextra 25747449 25747496 -3257160 + (CATCT)n Simple_repeat Simple_repeat 3 49 0 1 781 639 0 0 0 chrUextra 25747604 25747675 -3256981 + (TTCTC)n Simple_repeat Simple_repeat 2 72 0 1 781 828 320 22 24 chrUextra 25748334 25748792 -3255864 + MICROPIA_I LTR Gypsy 257 710 -3389 1 781 5790 2 0 0 chrUextra 25749040 25749661 -3254995 + Gypsy4_I LTR Gypsy 2447 3067 -3221 1 781 3057 176 10 3 chrUextra 25749762 25750382 -3254274 + SAR_DM Satellite Satellite 256 879 -593 1 781 5178 15 20 3 chrUextra 25750484 25751084 -3253572 - R1_DM LINE R1 -1032 4324 3715 1 781 810 0 0 0 chrUextra 25751206 25751296 -3253360 + (TCTTG)n Simple_repeat Simple_repeat 1 90 0 1 781 1443 18 6 0 chrUextra 25751928 25752091 -3252565 - DIVER_I LTR Pao -2197 3446 3283 1 781 3403 38 0 2 chrUextra 25752121 25752521 -3252135 - STALKER4_LTR LTR Gypsy -3 399 1 1 781 259 0 0 0 chrUextra 25752521 25752550 -3252106 - STALKER4_I LTR Gypsy 0 6530 6502 1 781 2988 97 42 119 chrUextra 25752652 25753181 -3251475 + Gypsy12_I LTR Gypsy 1334 1821 -3725 1 781 522 96 277 0 chrUextra 25753178 25753272 -3251384 + Gypsy12_I LTR Gypsy 4465 4584 -962 1 781 1220 61 0 6 chrUextra 25753372 25753552 -3251104 + (ATAAG)n Simple_repeat Simple_repeat 1 179 0 1 781 960 111 0 0 chrUextra 25753552 25753731 -3250925 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 781 287 152 0 12 chrUextra 25753735 25753772 -3250884 + polypurine Low_complexity Low_complexity 5 41 0 1 781 1071 94 0 0 chrUextra 25753772 25753952 -3250704 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 781 287 152 0 12 chrUextra 25753952 25753994 -3250662 + polypurine Low_complexity Low_complexity 42 83 0 1 781 5422 26 0 0 chrUextra 25754094 25754716 -3249940 - R1_DM LINE R1 -2069 3287 2666 1 781 3158 0 0 0 chrUextra 25754816 25755201 -3249455 + HMSBEAGLE_I LTR Gypsy 403 787 -5742 1 781 764 38 45 15 chrUextra 25755217 25755351 -3249305 + (TTA)n Simple_repeat Simple_repeat 3 140 0 1 781 790 0 0 0 chrUextra 25755351 25755438 -3249218 + HMSBEAGLE_I LTR Gypsy 976 1062 -5467 1 781 5216 16 0 10 chrUextra 25756260 25756882 -3247774 + IDEFIX_I LTR Gypsy 2760 3375 -2253 1 781 5674 6 2 0 chrUextra 25756982 25757604 -3247052 - R1_DM LINE R1 -371 4985 4363 1 781 3003 171 10 11 chrUextra 25759148 25759770 -3244886 + SAR_DM Satellite Satellite 402 1022 -450 1 781 519 150 10 20 chrUextra 25759874 25759976 -3244680 + DMTOM1_LTR LTR Gypsy 310 410 0 1 781 398 114 14 28 chrUextra 25759976 25760039 -3244617 + DMTOM1_LTR LTR Gypsy 349 410 0 1 781 232 256 46 15 chrUextra 25760288 25760419 -3244237 + A-rich Low_complexity Low_complexity 2 136 0 1 781 1552 55 35 0 chrUextra 25760592 25760792 -3243864 + R1_DM LINE R1 406 612 -4744 1 781 2870 32 3 11 chrUextra 25760777 25761128 -3243528 + R1_DM LINE R1 830 1177 -4179 1 781 725 67 0 0 chrUextra 25761125 25761214 -3243442 + R1_DM LINE R1 1328 1416 -3940 1 781 1852 195 65 13 chrUextra 25761314 25761919 -3242737 - SAR_DM Satellite Satellite -854 636 1 1 781 3914 0 0 0 chrUextra 25762238 25762658 -3241998 + NOMAD_LTR LTR Gypsy 1 420 -98 1 781 3603 15 2 25 chrUextra 25762758 25763379 -3241277 + HETRP_DM Satellite Satellite 1 606 -1284 1 781 729 0 0 0 chrUextra 25763479 25763560 -3241096 + (GAGAA)n Simple_repeat Simple_repeat 2 82 0 1 781 2303 169 6 5 chrUextra 25764200 25764821 -3239835 - SAR_DM Satellite Satellite -614 621 1 1 781 998 52 0 0 chrUextra 25764934 25765050 -3239606 + R1_DM LINE R1 5241 5356 0 1 781 3586 64 4 4 chrUextra 25765083 25765541 -3239115 + R1_DM LINE R1 1 458 -4898 1 781 5686 2 2 3 chrUextra 25765642 25766263 -3238393 + SSU-rRNA_Dme rRNA rRNA 878 1497 -498 1 781 2606 92 10 31 chrUextra 25766363 25766984 -3237672 - DMSAT6 Satellite Satellite -88 608 1 1 781 3647 265 26 31 chrUextra 25767084 25768426 -3236230 + SAR_DM Satellite Satellite 1 1335 -203 1 781 2946 172 11 8 chrUextra 25768529 25769139 -3235517 - SAR_DM Satellite Satellite -615 857 246 1 781 291 125 0 0 chrUextra 25769099 25769147 -3235509 + ARS406_DM Unknown Unknown 1 48 -305 1 781 673 0 0 0 chrUextra 25769247 25769320 -3235336 - NTS_DM Other Other -130 110 38 1 781 890 9 9 27 chrUextra 25769320 25769431 -3235225 - NTS_DM Other Other -107 133 25 1 781 21 57 0 0 chrUextra 25769458 25769493 -3235163 + AT_rich Low_complexity Low_complexity 1 35 0 1 781 1332 18 0 6 chrUextra 25769493 25769658 -3234998 - NTS_DM Other Other -39 201 38 1 781 928 9 0 27 chrUextra 25769658 25769770 -3234886 - NTS_DM Other Other -107 133 25 1 781 365 22 0 0 chrUextra 25769822 25769867 -3234789 - NTS_DM Other Other -39 201 157 1 781 5576 10 0 0 chrUextra 25769968 25770589 -3234067 + DMRT1B LINE R1 342 962 -4221 1 781 4770 29 5 52 chrUextra 25771410 25772027 -3232629 - BATUMI_I LTR Pao -5311 2652 2065 1 781 5135 23 2 11 chrUextra 25772131 25772752 -3231904 - R1_DM LINE R1 -1220 4136 3522 1 781 5146 21 2 16 chrUextra 25772852 25773473 -3231183 + BATUMI_I LTR Pao 2725 3336 -4627 1 781 5556 2 7 3 chrUextra 25773573 25774193 -3230463 + LSU-rRNA_Dme rRNA rRNA 1147 1768 -2132 1 781 3665 5 0 2 chrUextra 25774323 25774726 -3229930 - STALKER4_LTR LTR Gypsy 0 402 1 1 781 1266 93 0 0 chrUextra 25774726 25774909 -3229747 + ARS406_DM Unknown Unknown 7 189 -164 1 781 3093 123 40 21 chrUextra 25775015 25775636 -3229020 - TART_B1 LINE telomeric -8216 2438 1806 1 781 356 0 0 0 chrUextra 25775736 25775781 -3228875 + NTS_DM Other Other 89 133 -107 1 781 1507 20 20 20 chrUextra 25775781 25775984 -3228672 + NTS_DM Other Other 38 240 0 1 781 1837 25 17 17 chrUextra 25775984 25776224 -3228432 + NTS_DM Other Other 1 240 0 1 781 1203 8 0 0 chrUextra 25776224 25776357 -3228299 + NTS_DM Other Other 1 133 -107 1 781 2519 109 8 41 chrUextra 25776457 25777063 -3227593 - DMSAT6 Satellite Satellite -17 585 1 1 781 618 267 199 13 chrUextra 25777406 25777789 -3226867 + TV1I LTR Gypsy 378 828 -5232 1 781 21 0 0 0 chrUextra 25777986 25778007 -3226649 + AT_rich Low_complexity Low_complexity 1 21 0 1 781 866 84 113 0 chrUextra 25778378 25778520 -3226136 + DNAREP1_DM LINE Penelope 3 160 -434 1 781 2665 177 11 8 chrUextra 25778620 25779240 -3225416 + SAR_DM Satellite Satellite 206 827 -645 1 781 2549 186 11 14 chrUextra 25779345 25779962 -3224694 + SAR_DM Satellite Satellite 1 615 -396 1 781 4647 27 0 5 chrUextra 25780089 25780683 -3223973 - CIRCE LINE Composite -1376 4980 4390 1 781 714 288 44 44 chrUextra 25780783 25781402 -3223254 - SAR_DM Satellite Satellite -856 619 1 1 781 933 84 6 18 chrUextra 25781507 25782115 -3222541 - RSP Satellite Satellite -71 601 1 1 781 492 174 0 0 chrUextra 25782946 25783038 -3221618 - BS2 LINE Jockey -1909 2812 2721 1 781 1432 156 90 17 chrUextra 25783039 25783385 -3221271 - MDG1_LTR LTR Gypsy -30 412 42 1 781 1479 28 0 0 chrUextra 25783385 25783565 -3221091 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 781 2452 4 0 0 chrUextra 25783667 25783948 -3220708 + R1_DM LINE R1 5076 5356 0 1 781 2816 3 0 0 chrUextra 25783960 25784288 -3220368 + R1_DM LINE R1 3231 3558 -1798 1 781 2686 182 10 8 chrUextra 25784388 25785008 -3219648 + SAR_DM Satellite Satellite 388 1008 -464 1 781 2385 108 0 0 chrUextra 25785110 25785454 -3219202 + NOMAD_I LTR Gypsy 4126 4469 -2103 1 781 2342 21 0 0 chrUextra 25785451 25785730 -3218926 - Baggins1 LINE LOA -1 5452 5174 1 781 5312 0 2 5 chrUextra 25785830 25786451 -3218205 - SSU-rRNA_Dme rRNA rRNA -682 1313 695 1 781 4162 55 161 3 chrUextra 25786551 25787172 -3217484 + TART_B1 LINE telomeric 2669 3387 -7267 1 781 2785 163 18 8 chrUextra 25787275 25787893 -3216763 - SAR_DM Satellite Satellite -581 891 268 1 781 4947 3 5 5 chrUextra 25788019 25788614 -3216042 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1194 1 781 5028 5 0 2 chrUextra 25788714 25789299 -3215357 - LSU-rRNA_Dme rRNA rRNA -1529 2371 1788 1 781 1358 88 0 15 chrUextra 25790177 25790374 -3214282 - PROTOP_B DNA P 0 1153 960 1 781 342 222 11 109 chrUextra 25790538 25790769 -3213887 + Gypsy_LTR LTR Gypsy 29 215 -267 1 781 2411 65 32 20 chrUextra 25791598 25792219 -3212437 + PROTOP_A DNA P 527 1020 -85 1 781 1454 258 52 45 chrUextra 25792339 25792916 -3211740 - Gypsy12_LTR LTR Gypsy -1564 772 192 1 781 561 138 0 18 chrUextra 25793040 25793151 -3211505 - ARS406_DM Unknown Unknown -244 109 1 1 781 2450 186 10 15 chrUextra 25793056 25793661 -3210995 + SAR_DM Satellite Satellite 195 796 -676 1 781 837 173 74 48 chrUextra 25793765 25794074 -3210582 - TAHRE LINE telomeric -10127 336 20 1 781 976 119 0 6 chrUextra 25794110 25794271 -3210385 - TART LINE telomeric -3814 10663 10504 1 781 455 189 82 0 chrUextra 25794260 25794382 -3210274 - TART LINE telomeric -4205 10272 10141 1 781 2745 184 15 19 chrUextra 25794482 25795103 -3209553 - SAR_DM Satellite Satellite -545 618 1 1 781 5382 0 2 2 chrUextra 25795203 25795822 -3208834 + SSU-rRNA_Dme rRNA rRNA 1377 1995 0 1 781 5308 0 2 5 chrUextra 25795924 25796545 -3208111 - SSU-rRNA_Dme rRNA rRNA -499 1496 878 1 781 5187 14 2 0 chrUextra 25796645 25797266 -3207390 + R1_DM LINE R1 2055 2676 -2680 1 781 1626 31 66 0 chrUextra 25797366 25797592 -3207064 + IDEFIX_I LTR Gypsy 5232 5472 -156 1 781 3180 25 8 0 chrUextra 25797591 25797987 -3206669 + DIVER2_I LTR Pao 544 942 -3205 1 781 40 59 0 0 chrUextra 25798142 25798210 -3206446 + AT_rich Low_complexity Low_complexity 1 68 0 1 781 1116 0 0 0 chrUextra 25798584 25798708 -3205948 + (TA)n Simple_repeat Simple_repeat 2 125 0 1 781 28 48 0 0 chrUextra 25798927 25798969 -3205687 + AT_rich Low_complexity Low_complexity 1 42 0 1 781 32 0 0 0 chrUextra 25799300 25799332 -3205324 + AT_rich Low_complexity Low_complexity 1 32 0 1 781 2815 161 13 8 chrUextra 25799541 25800150 -3204506 + SAR_DM Satellite Satellite 326 937 -535 1 781 2990 184 47 0 chrUextra 25800253 25800871 -3203785 - IDEFIX_I LTR Gypsy -4480 1148 502 1 781 2697 182 10 5 chrUextra 25800974 25801592 -3203064 - SAR_DM Satellite Satellite -549 923 303 1 781 2757 158 18 15 chrUextra 25801692 25802300 -3202356 - SAR_DM Satellite Satellite -494 978 369 1 781 5168 11 0 0 chrUextra 25802413 25803034 -3201622 + DMRT1B LINE R1 854 1474 -3709 1 781 2959 0 6 6 chrUextra 25803134 25803490 -3201166 + LSU-rRNA_Dme rRNA rRNA 1433 1788 -2112 1 781 1944 0 0 0 chrUextra 25803534 25803755 -3200901 + LSU-rRNA_Dme rRNA rRNA 1788 2008 -1892 1 781 601 28 0 0 chrUextra 25803855 25803927 -3200729 + R1_DM LINE R1 5285 5356 0 1 781 3629 70 48 0 chrUextra 25803960 25804476 -3200180 + R1_DM LINE R1 1 541 -4815 1 781 2463 185 6 24 chrUextra 25804576 25805197 -3199459 + SAR_DM Satellite Satellite 509 1118 -354 1 781 1837 5 0 0 chrUextra 25806019 25806230 -3198426 - TABOR_LTR LTR Gypsy -295 211 1 1 781 2395 18 7 7 chrUextra 25806228 25806639 -3198017 - TABOR_I LTR Gypsy 0 6336 5805 1 781 4169 45 96 0 chrUextra 25806739 25807342 -3197314 + TRANSIB2 DNA Transib 1309 1969 -875 1 781 2750 169 15 7 chrUextra 25807460 25808060 -3196596 - SAR_DM Satellite Satellite -542 930 326 1 781 1224 0 0 0 chrUextra 25808181 25808321 -3196335 - SSU-rRNA_Dme rRNA rRNA -1855 140 1 1 781 32 0 0 0 chrUextra 25808453 25808485 -3196171 + AT_rich Low_complexity Low_complexity 1 32 0 1 781 454 157 0 0 chrUextra 25809623 25809693 -3194963 + A-rich Low_complexity Low_complexity 108 177 0 1 781 234 0 0 162 chrUextra 25809693 25810235 -3194421 + (CAAGA)n Simple_repeat Simple_repeat 1 454 0 1 781 5125 19 0 0 chrUextra 25810344 25810965 -3193691 - R1_DM LINE R1 -860 4496 3876 1 781 5365 3 0 0 chrUextra 25811066 25811686 -3192970 - R1_DM LINE R1 -3296 2060 1441 1 781 1571 206 96 30 chrUextra 25811787 25812402 -3192254 - Gypsy12_LTR LTR Gypsy -488 1792 1154 1 781 2762 178 11 5 chrUextra 25812507 25813128 -3191528 + SAR_DM Satellite Satellite 267 891 -581 1 781 2594 180 10 7 chrUextra 25813228 25813826 -3190830 - SAR_DM Satellite Satellite -627 845 246 1 781 354 127 0 0 chrUextra 25813786 25813849 -3190807 + ARS406_DM Unknown Unknown 1 63 -290 1 781 5219 5 0 0 chrUextra 25813949 25814570 -3190086 + MDG1_I LTR Gypsy 5406 6026 -570 1 781 2770 173 15 7 chrUextra 25814675 25815291 -3189365 + SAR_DM Satellite Satellite 399 1019 -453 1 781 2302 94 10 26 chrUextra 25815391 25816008 -3188648 - DMSAT6 Satellite Satellite -70 606 1 1 781 2730 171 10 5 chrUextra 25816136 25816731 -3187925 + SAR_DM Satellite Satellite 326 923 -549 1 781 1191 30 118 6 chrUextra 25816833 25817002 -3187654 - R1_DM LINE R1 -1974 3382 3195 1 781 3680 24 0 2 chrUextra 25817000 25817452 -3187204 - R1_DM LINE R1 -2484 2872 2422 1 781 2180 207 20 9 chrUextra 25817560 25818170 -3186486 + SAR_DM Satellite Satellite 1 617 -396 1 781 2897 160 14 11 chrUextra 25818275 25818896 -3185760 + SAR_DM Satellite Satellite 408 1030 -442 1 781 4042 81 89 0 chrUextra 25818996 25819613 -3185043 + TART LINE telomeric 1030 1701 -12776 1 781 2485 100 29 5 chrUextra 25819717 25820330 -3184326 + DMSAT6 Satellite Satellite 1 628 -97 1 781 27 0 0 0 chrUextra 25820560 25820587 -3184069 + AT_rich Low_complexity Low_complexity 1 27 0 1 97 2667 158 23 16 chrUextra 25821159 25821770 -3182886 - SAR_DM Satellite Satellite -505 967 353 1 782 2496 207 24 24 chrUextra 25821890 25822501 -3182155 - SAR_DM Satellite Satellite -1100 611 1 1 782 2850 164 10 10 chrUextra 25822602 25823222 -3181434 - SAR_DM Satellite Satellite -521 951 332 1 782 3874 62 23 19 chrUextra 25823322 25823941 -3180715 - R1_DM LINE R1 -4659 697 1 1 782 4849 7 13 8 chrUextra 25824044 25824662 -3179994 - Invader3_I LTR Gypsy -71 4817 4197 1 782 5075 24 2 0 chrUextra 25824762 25825382 -3179274 + R1_DM LINE R1 4583 5203 -153 1 782 2670 191 7 5 chrUextra 25825486 25826101 -3178555 - SAR_DM Satellite Satellite -620 852 237 1 782 5036 8 0 3 chrUextra 25826202 25826822 -3177834 + STALKER4_I LTR Gypsy 1147 1764 -4766 1 782 2484 170 21 20 chrUextra 25827642 25828249 -3176407 - SAR_DM Satellite Satellite -539 933 326 1 782 1452 5 25 15 chrUextra 25828362 25828560 -3176096 + NTS_DM Other Other 41 240 0 1 782 1290 6 0 18 chrUextra 25828560 25828725 -3175931 + NTS_DM Other Other 1 162 -78 1 782 488 119 36 0 chrUextra 25828835 25828919 -3175737 + NTS_DM Other Other 4 90 -150 1 782 5254 18 2 0 chrUextra 25829082 25829702 -3174954 + Gypsy6_I LTR Gypsy 4756 5376 -1636 1 782 2545 73 15 15 chrUextra 25829813 25830422 -3174234 - DMSAT6 Satellite Satellite -4 609 1 1 782 682 173 31 10 chrUextra 25830522 25830734 -3173922 - DNAREP1_DM LINE Penelope -262 332 128 1 782 502 143 0 11 chrUextra 25830819 25830911 -3173745 - DNAREP1_DM LINE Penelope -503 91 1 1 782 679 114 65 138 chrUextra 25830953 25831142 -3173514 - DNAREP1_DM LINE Penelope -287 307 5 1 782 2661 181 15 7 chrUextra 25831242 25831854 -3172802 + SAR_DM Satellite Satellite 287 903 -569 1 782 2147 115 10 57 chrUextra 25831963 25832582 -3172074 + DMSAT6 Satellite Satellite 1 589 -67 1 782 4448 55 0 0 chrUextra 25832715 25833302 -3171354 + FW_DM LINE Jockey 111 697 -3995 1 782 5026 24 23 0 chrUextra 25833402 25834022 -3170634 - R1_DM LINE R1 -3280 2076 1443 1 782 2796 171 11 10 chrUextra 25834122 25834741 -3169915 - SAR_DM Satellite Satellite -428 1044 425 1 782 2488 37 339 49 chrUextra 25834842 25835376 -3169280 + MDG1_I LTR Gypsy 5908 6596 0 1 782 383 68 17 0 chrUextra 25835395 25835454 -3169202 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 782 4963 16 0 0 chrUextra 25835562 25836182 -3168474 + Invader2_I LTR Gypsy 2974 3593 -999 1 782 2781 165 15 7 chrUextra 25836291 25836896 -3167760 + SAR_DM Satellite Satellite 282 891 -581 1 782 2731 175 28 7 chrUextra 25837002 25837618 -3167038 + SAR_DM Satellite Satellite 409 1037 -435 1 782 1747 27 0 59 chrUextra 25838103 25838342 -3166314 - Baggins1 LINE LOA 0 5453 5229 1 782 5061 11 0 0 chrUextra 25838442 25839062 -3165594 - Invader2_I LTR Gypsy -1099 3493 2874 1 782 1833 47 0 8 chrUextra 25839544 25839780 -3164876 - PROTOP_B DNA P 0 1153 920 1 782 2209 163 13 8 chrUextra 25839882 25840500 -3164156 + SAR_DM Satellite Satellite 1 621 -425 1 782 2827 166 8 10 chrUextra 25840607 25841221 -3163435 + SAR_DM Satellite Satellite 425 1037 -435 1 782 2557 167 24 26 chrUextra 25841326 25841942 -3162714 - SAR_DM Satellite Satellite -620 852 238 1 782 3588 273 11 19 chrUextra 25842049 25843382 -3161274 + SAR_DM Satellite Satellite 1 1323 -208 1 782 1345 6 0 0 chrUextra 25843482 25843644 -3161012 - NTS_DM Other Other -78 162 1 1 782 1756 17 17 17 chrUextra 25843644 25843884 -3160772 - NTS_DM Other Other 0 240 1 1 782 1538 19 18 18 chrUextra 25843884 25844102 -3160554 - NTS_DM Other Other 0 240 23 1 782 2558 179 8 8 chrUextra 25844203 25844799 -3159857 - SAR_DM Satellite Satellite -682 790 195 1 782 640 121 0 8 chrUextra 25844705 25844822 -3159834 + ARS406_DM Unknown Unknown 1 116 -237 1 782 1388 6 0 0 chrUextra 25844922 25845089 -3159567 - NTS_DM Other Other -73 167 1 1 782 1710 25 17 17 chrUextra 25845089 25845329 -3159327 - NTS_DM Other Other 0 240 1 1 782 1522 14 19 19 chrUextra 25845329 25845542 -3159114 - NTS_DM Other Other 0 240 28 1 782 1356 196 29 7 chrUextra 25845642 25846257 -3158399 + SAR_DM Satellite Satellite 1 628 -668 1 782 1209 27 0 0 chrUextra 25846362 25846510 -3158146 + Gypsy4_I LTR Gypsy 6141 6288 0 1 782 2405 14 3 0 chrUextra 25846510 25846796 -3157860 + Gypsy4_LTR LTR Gypsy 1 287 0 1 782 306 73 0 0 chrUextra 25846799 25846840 -3157816 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 1 782 1130 42 0 0 chrUextra 25846840 25846982 -3157674 + DM1731_LTR LTR Copia 118 259 -77 1 782 1047 82 0 0 chrUextra 25847089 25847247 -3157409 + ARS406_DM Unknown Unknown 1 158 -195 1 782 1982 191 9 4 chrUextra 25847244 25847701 -3156955 - SAR_DM Satellite Satellite -558 914 456 1 782 3910 2 4 2 chrUextra 25847802 25848255 -3156401 - SSU-rRNA_Dme rRNA rRNA -1541 454 1 1 782 32 0 0 0 chrUextra 25848387 25848419 -3156237 + AT_rich Low_complexity Low_complexity 1 32 0 1 782 813 30 0 0 chrUextra 25848522 25848622 -3156034 + (CAAGA)n Simple_repeat Simple_repeat 1 100 0 1 782 1389 39 0 0 chrUextra 25848622 25848801 -3155855 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 1 782 1439 42 36 42 chrUextra 25848810 25849142 -3155514 + (CAAGA)n Simple_repeat Simple_repeat 1 329 0 1 782 2322 26 159 0 chrUextra 25849242 25849862 -3154794 + R1_DM LINE R1 2947 3665 -1691 1 782 5422 3 0 0 chrUextra 25849963 25850582 -3154074 - SSU-rRNA_Dme rRNA rRNA -1288 707 89 1 782 251 130 0 0 chrUextra 25850682 25850728 -3153928 - ARS406_DM Unknown Unknown -307 46 1 1 782 2878 169 5 8 chrUextra 25850688 25851302 -3153354 + SAR_DM Satellite Satellite 246 857 -615 1 782 5423 0 2 0 chrUextra 25851402 25852022 -3152634 - LSU-rRNA_Dme rRNA rRNA -460 3440 2820 1 782 2571 188 10 5 chrUextra 25852122 25852731 -3151925 - SAR_DM Satellite Satellite -637 835 224 1 782 430 113 0 0 chrUextra 25852669 25852740 -3151916 + ARS406_DM Unknown Unknown 1 71 -282 1 782 790 11 0 0 chrUextra 25853562 25853654 -3151002 - NTS_DM Other Other -148 92 1 1 782 1491 19 18 32 chrUextra 25853654 25853873 -3150783 - NTS_DM Other Other 0 240 25 1 782 334 44 0 0 chrUextra 25853925 25853970 -3150686 - NTS_DM Other Other -39 201 157 1 782 2855 163 11 8 chrUextra 25854282 25854899 -3149757 + SAR_DM Satellite Satellite 419 1037 -435 1 782 924 41 0 0 chrUextra 25855002 25855123 -3149533 + (TCTTG)n Simple_repeat Simple_repeat 4 124 0 1 782 2323 96 10 26 chrUextra 25855722 25856342 -3148314 + DMSAT6 Satellite Satellite 1 609 -399 1 782 1872 0 8 8 chrUextra 25856442 25856677 -3147979 + LSU-rRNA_Dme rRNA rRNA 1554 1788 -2112 1 782 3010 0 0 0 chrUextra 25856721 25857062 -3147594 + LSU-rRNA_Dme rRNA rRNA 1788 2128 -1772 1 782 3730 9 2 0 chrUextra 25857162 25857627 -3147029 + STALKER4_I LTR Gypsy 3155 3620 -2910 1 782 1270 18 6 6 chrUextra 25857614 25857782 -3146874 + STALKER4_I LTR Gypsy 4662 4829 -1701 1 782 2290 111 11 13 chrUextra 25857882 25858502 -3146154 - DMSAT6 Satellite Satellite -18 619 1 1 782 3199 92 73 32 chrUextra 25858603 25859222 -3145434 + STALKER4_I LTR Gypsy 643 1286 -5244 1 782 1701 21 17 21 chrUextra 25859346 25859587 -3145069 - NTS_DM Other Other 0 240 1 1 782 1756 17 17 17 chrUextra 25859587 25859827 -3144829 - NTS_DM Other Other 0 240 1 1 782 650 36 35 35 chrUextra 25859827 25859942 -3144714 - NTS_DM Other Other 0 240 126 1 782 5368 2 2 2 chrUextra 25860042 25860662 -3143994 + LSU-rRNA_Dme rRNA rRNA 3224 3843 -57 1 782 23 54 0 0 chrUextra 25860778 25860815 -3143841 + AT_rich Low_complexity Low_complexity 1 37 0 1 782 832 9 9 27 chrUextra 25860841 25860952 -3143704 + NTS_DM Other Other 25 133 -107 1 782 817 0 0 0 chrUextra 25860952 25861048 -3143608 + NTS_DM Other Other 38 133 -107 1 782 1408 20 20 20 chrUextra 25861048 25861251 -3143405 + NTS_DM Other Other 38 240 0 1 782 1016 16 0 15 chrUextra 25861251 25861382 -3143274 + NTS_DM Other Other 1 129 -111 1 782 2794 183 7 3 chrUextra 25861486 25862101 -3142555 + SAR_DM Satellite Satellite 246 862 -610 1 782 1305 51 0 0 chrUextra 25862217 25862395 -3142261 + (TCTTG)n Simple_repeat Simple_repeat 1 178 0 1 782 393 75 0 0 chrUextra 25862395 25862448 -3142208 + (ACTTG)n Simple_repeat Simple_repeat 3 55 0 1 782 1620 0 0 0 chrUextra 25862463 25862821 -3141835 + (CACAA)n Simple_repeat Simple_repeat 1 358 0 1 782 5078 24 0 2 chrUextra 25862922 25863542 -3141114 - R1_DM LINE R1 -3196 2160 1542 1 782 1562 20 5 5 chrUextra 25863642 25863846 -3140810 - NTS_DM Other Other -36 204 1 1 782 1408 20 20 20 chrUextra 25863846 25864049 -3140607 - NTS_DM Other Other 0 240 38 1 782 817 0 0 0 chrUextra 25864049 25864145 -3140511 - NTS_DM Other Other -107 133 38 1 782 809 19 9 27 chrUextra 25864145 25864256 -3140400 - NTS_DM Other Other -107 133 25 1 782 2288 206 10 13 chrUextra 25864368 25864982 -3139674 - SAR_DM Satellite Satellite -416 1056 445 1 782 2927 138 6 4 chrUextra 25865082 25865702 -3138954 + BATUMI_I LTR Pao 3956 4652 -3262 1 782 3460 90 40 24 chrUextra 25865802 25866346 -3138310 + Gypsy12_I LTR Gypsy 1002 1554 -3992 1 782 516 43 14 0 chrUextra 25866353 25866422 -3138234 + Gypsy12_I LTR Gypsy 1503 1572 -3974 1 782 5390 0 2 2 chrUextra 25866522 25867142 -3137514 + LSU-rRNA_Dme rRNA rRNA 2839 3458 -442 1 782 878 18 106 0 chrUextra 25867242 25867355 -3137301 - PROTOP_A DNA P -980 125 1 1 782 2244 11 0 0 chrUextra 25867355 25867617 -3137039 + PROTOP_A DNA P 844 1105 0 1 782 2020 4 8 4 chrUextra 25867617 25867862 -3136794 - TART LINE telomeric -3953 10524 10279 1 782 2279 106 15 13 chrUextra 25867962 25868582 -3136074 + DMSAT6 Satellite Satellite 1 621 -264 1 782 4982 15 0 5 chrUextra 25868682 25869302 -3135354 - CIRCE LINE Composite -1558 4798 4182 1 782 2793 20 73 0 chrUextra 25869665 25870022 -3134634 + PROTOP_A DNA P 1 383 -722 1 782 4843 15 2 19 chrUextra 25870122 25870742 -3133914 - STALKER4_I LTR Gypsy -1212 5318 4710 1 782 680 0 115 0 chrUextra 25870846 25871054 -3133602 + (TTA)n Simple_repeat Simple_repeat 1 232 0 1 782 3557 0 0 0 chrUextra 25871058 25871462 -3133194 - ROO_LTR LTR Pao 0 428 25 1 782 1620 4 0 0 chrUextra 25871915 25872182 -3132474 + (TTCTC)n Simple_repeat Simple_repeat 1 267 0 1 782 587 21 40 40 chrUextra 25872282 25872381 -3132275 + NTS_DM Other Other 142 240 0 1 782 1726 17 17 21 chrUextra 25872381 25872622 -3132034 + NTS_DM Other Other 1 240 0 1 782 1756 17 17 17 chrUextra 25872622 25872862 -3131794 + NTS_DM Other Other 1 240 0 1 782 332 25 0 0 chrUextra 25872862 25872902 -3131754 + NTS_DM Other Other 1 40 -200 1 782 5144 8 3 3 chrUextra 25873002 25873622 -3131034 - R1_DM LINE R1 -1278 4078 3459 1 782 2641 188 10 8 chrUextra 25873725 25874342 -3130314 + SAR_DM Satellite Satellite 244 861 -611 1 782 2299 97 23 14 chrUextra 25874443 25875062 -3129594 + DMSAT6 Satellite Satellite 1 624 0 1 782 1167 7 0 0 chrUextra 25875330 25875465 -3129191 - 5S_DM RNA RNA 0 135 1 1 782 650 13 0 0 chrUextra 25875703 25875782 -3128874 - 5S_DM RNA RNA 0 135 57 1 782 1040 167 33 8 chrUextra 25875882 25876124 -3128532 + SAR_DM Satellite Satellite 656 903 -569 1 782 657 53 53 0 chrUextra 25876039 25876134 -3128522 - ARS406_DM Unknown Unknown -164 189 90 1 782 1725 167 6 8 chrUextra 25876139 25876502 -3128154 + SAR_DM Satellite Satellite 496 857 -615 1 782 2285 92 18 26 chrUextra 25876616 25877222 -3127434 + DMSAT6 Satellite Satellite 1 600 -3 1 782 949 179 35 17 chrUextra 25877323 25877707 -3126949 + SAR_DM Satellite Satellite 1 391 -680 1 782 907 171 36 9 chrUextra 25877718 25877942 -3126714 + SAR_DM Satellite Satellite 539 768 -704 1 782 2544 229 3 3 chrUextra 25878762 25879372 -3125284 + ROVER-I_DM LTR Gypsy 1992 2601 -3983 1 782 2790 164 13 11 chrUextra 25879488 25880100 -3124556 + SAR_DM Satellite Satellite 425 1037 -435 1 782 920 69 3 17 chrUextra 25880202 25880822 -3123834 + RSP Satellite Satellite 1 611 0 1 782 2992 22 0 29 chrUextra 25880922 25881301 -3123355 + CIRCE LINE Composite 1515 1882 -4474 1 782 404 332 18 18 chrUextra 25881310 25881537 -3123119 + Gypsy12_I LTR Gypsy 3835 4061 -1485 1 782 1218 38 0 36 chrUextra 25881377 25881542 -3123114 + CIRCE LINE Composite 1888 2046 -4310 1 782 2018 13 0 0 chrUextra 25881642 25881877 -3122779 + PROTOP_A DNA P 871 1105 0 1 782 241 176 0 19 chrUextra 25881915 25881967 -3122689 - HMSBEAGLE_I LTR Gypsy -6308 221 171 1 782 351 49 65 16 chrUextra 25881981 25882043 -3122613 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 782 922 168 102 15 chrUextra 25882042 25882247 -3122409 - DMLTR5 LTR Gypsy 0 266 44 1 782 5345 2 2 2 chrUextra 25883082 25883702 -3120954 - LSU-rRNA_Dme rRNA rRNA -1173 2727 2108 1 782 5050 16 2 3 chrUextra 25883802 25884422 -3120234 - R1_DM LINE R1 -1336 4020 3402 1 782 2312 191 42 7 chrUextra 25884522 25885138 -3119518 - SAR_DM Satellite Satellite -611 861 224 1 782 3396 167 28 0 chrUextra 25885242 25885860 -3118796 + Gypsy5_I LTR Gypsy 2510 3144 -3365 1 782 4997 14 0 2 chrUextra 25885962 25886582 -3118074 - QUASIMODO_I LTR Gypsy -4537 1523 905 1 782 4856 15 18 24 chrUextra 25886682 25887302 -3117354 + ACCORD2_I LTR Gypsy 2 617 -6595 1 782 2239 112 16 41 chrUextra 25887407 25888017 -3116639 + DMSAT6 Satellite Satellite 1 594 0 1 782 5481 2 3 3 chrUextra 25888126 25888742 -3115914 - LSU-rRNA_Dme rRNA rRNA -2324 1576 961 1 782 1368 66 3 0 chrUextra 25888846 25889447 -3115209 + (ATAAG)n Simple_repeat Simple_repeat 1 603 0 1 782 3160 163 7 8 chrUextra 25889562 25890182 -3114474 - SAR_DM Satellite Satellite -441 1031 413 1 782 2751 181 21 10 chrUextra 25890282 25890902 -3113754 + SAR_DM Satellite Satellite 274 900 -572 1 782 3632 277 17 24 chrUextra 25891004 25892342 -3112314 - SAR_DM Satellite Satellite -425 1329 1 1 782 2958 174 8 8 chrUextra 25892448 25893061 -3111595 - SAR_DM Satellite Satellite -514 958 346 1 782 5038 8 40 2 chrUextra 25893162 25893782 -3110874 + QUASIMODO_I LTR Gypsy 3842 4485 -1575 1 782 5271 31 0 0 chrUextra 25893882 25894502 -3110154 + R1_DM LINE R1 1376 1995 -3361 1 782 5281 8 50 0 chrUextra 25894602 25895221 -3109435 - DOC2_DM LINE Jockey -1456 3337 2688 1 782 2824 173 16 21 chrUextra 25895321 25895940 -3108716 - SAR_DM Satellite Satellite -445 1027 412 1 782 4591 47 31 5 chrUextra 25896040 25896659 -3107997 + IDEFIX_I LTR Gypsy 3182 3816 -1812 1 782 262 146 0 0 chrUextra 25896761 25896809 -3107847 - ARS406_DM Unknown Unknown -305 48 1 1 782 2895 179 8 5 chrUextra 25896769 25897374 -3107282 + SAR_DM Satellite Satellite 246 852 -620 1 782 3036 162 10 11 chrUextra 25897479 25898097 -3106559 - SAR_DM Satellite Satellite -435 1037 421 1 782 5184 19 23 7 chrUextra 25898197 25898816 -3105840 + FW_DM LINE Jockey 3906 4534 -158 1 782 2401 173 31 58 chrUextra 25898963 25899535 -3105121 + TART_B1 LINE telomeric 798 1354 -9300 1 782 5560 0 2 0 chrUextra 25899635 25900254 -3104402 + DOC LINE Jockey 2418 3037 -1688 1 782 2249 234 8 5 chrUextra 25900356 25900969 -3103687 - Stalker2_I LTR Gypsy -3256 4146 3532 1 782 5668 0 2 0 chrUextra 25901073 25901692 -3102964 + SSU-rRNA_Dme rRNA rRNA 275 894 -1101 1 782 5590 2 2 0 chrUextra 25901792 25902410 -3102246 - LSU-rRNA_Dme rRNA rRNA -1494 2406 1788 1 782 2778 185 8 10 chrUextra 25902511 25903129 -3101527 - SAR_DM Satellite Satellite -399 1073 457 1 782 4605 26 6 0 chrUextra 25903949 25904493 -3100163 - R1_DM LINE R1 -251 5105 4559 1 782 616 26 0 0 chrUextra 25904491 25904568 -3100088 - R1_DM LINE R1 -1270 4086 4010 1 782 3009 168 8 10 chrUextra 25904668 25905287 -3099369 - SAR_DM Satellite Satellite -443 1029 412 1 782 2892 171 14 10 chrUextra 25905387 25906006 -3098650 + SAR_DM Satellite Satellite 333 954 -518 1 782 2316 187 4 6 chrUextra 25906106 25906600 -3098056 + SAR_DM Satellite Satellite 584 1076 -396 1 782 379 211 9 37 chrUextra 25906617 25906725 -3097931 + SAR_DM Satellite Satellite 667 771 -701 1 782 2893 174 10 10 chrUextra 25906825 25907436 -3097220 - SAR_DM Satellite Satellite -615 857 247 1 782 285 106 0 0 chrUextra 25907397 25907444 -3097212 + ARS406_DM Unknown Unknown 1 47 -306 1 782 2652 194 10 8 chrUextra 25907545 25908159 -3096497 + SAR_DM Satellite Satellite 287 901 -571 1 782 1777 201 18 93 chrUextra 25908276 25908880 -3095776 - HETA LINE telomeric -2135 3946 3388 1 782 1599 5 0 0 chrUextra 25908982 25909204 -3095452 + (GAGAA)n Simple_repeat Simple_repeat 1 222 0 1 782 450 0 0 51 chrUextra 25909701 25909760 -3094896 - NTS_DM Other Other -184 56 1 1 782 1915 8 17 13 chrUextra 25909760 25909999 -3094657 - NTS_DM Other Other 0 240 1 1 782 1561 10 20 15 chrUextra 25909999 25910201 -3094455 - NTS_DM Other Other 0 240 38 1 782 907 9 0 27 chrUextra 25910201 25910313 -3094343 - NTS_DM Other Other -107 133 25 1 782 2586 86 15 14 chrUextra 25910420 25911011 -3093645 - DMSAT6 Satellite Satellite -82 592 1 1 782 2941 174 8 5 chrUextra 25911139 25911741 -3092915 + SAR_DM Satellite Satellite 334 937 -535 1 782 1004 71 0 0 chrUextra 25911618 25911758 -3092898 - ARS406_DM Unknown Unknown -164 189 50 1 782 977 185 62 45 chrUextra 25913624 25913913 -3090743 + STALKER4_I LTR Gypsy 885 1178 -5352 1 782 2442 190 30 10 chrUextra 25914031 25914632 -3090024 - SAR_DM Satellite Satellite -396 1076 464 1 782 2592 78 21 42 chrUextra 25914734 25915353 -3089303 - DMSAT6 Satellite Satellite -50 606 1 1 782 434 0 19 0 chrUextra 25915453 25915506 -3089150 + 5S_DM RNA RNA 82 135 0 1 782 1222 7 0 0 chrUextra 25915737 25915872 -3088784 + 5S_DM RNA RNA 1 135 0 1 782 2551 91 5 65 chrUextra 25916172 25916790 -3087866 - DMSAT6 Satellite Satellite -103 580 1 1 782 1917 281 11 7 chrUextra 25916891 25917462 -3087194 + HMSBEAGLE_I LTR Gypsy 3419 3933 -2596 1 782 2332 111 15 42 chrUextra 25917614 25918229 -3086427 - DMSAT6 Satellite Satellite 0 597 1 1 782 5636 0 2 0 chrUextra 25918329 25918948 -3085708 + SSU-rRNA_Dme rRNA rRNA 546 1165 -830 1 782 3785 10 2 2 chrUextra 25919048 25919520 -3085136 - Copia2_I LTR Copia -3640 522 1 1 782 1305 0 7 0 chrUextra 25919520 25919667 -3084989 - Copia2_LTR_DM LTR Copia 0 198 51 1 782 5419 8 2 3 chrUextra 25919767 25920386 -3084270 + DOC2_DM LINE Jockey 1724 2341 -2452 1 782 21 0 0 0 chrUextra 25920770 25920791 -3083865 + AT_rich Low_complexity Low_complexity 1 21 0 1 782 2648 187 10 12 chrUextra 25921205 25921811 -3082845 - SAR_DM Satellite Satellite -673 799 195 1 782 606 132 0 9 chrUextra 25921717 25921824 -3082832 + ARS406_DM Unknown Unknown 1 106 -247 1 782 5355 26 0 0 chrUextra 25921924 25922543 -3082113 + R1_DM LINE R1 1619 2237 -3119 1 782 3081 169 8 8 chrUextra 25923362 25923981 -3080675 - SAR_DM Satellite Satellite -435 1037 419 1 782 1556 0 6 0 chrUextra 25924081 25924256 -3080400 - R1_DM LINE R1 -5180 176 1 1 782 476 36 0 0 chrUextra 25924256 25924311 -3080345 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 782 3597 0 0 0 chrUextra 25924307 25924700 -3079956 - R2_DM LINE R2 -6 3601 3209 1 782 2985 150 10 21 chrUextra 25924807 25925419 -3079237 + SAR_DM Satellite Satellite 332 936 -536 1 782 5374 18 0 2 chrUextra 25925519 25926138 -3078518 - FW_DM LINE Jockey -3474 1218 601 1 782 5592 5 0 2 chrUextra 25926238 25926857 -3077799 + LSU-rRNA_Dme rRNA rRNA 2815 3432 -468 1 782 2557 95 10 26 chrUextra 25926957 25927576 -3077080 - DMSAT6 Satellite Satellite -127 608 1 1 782 1333 18 0 12 chrUextra 25927676 25927844 -3076812 + IDEFIX_LTR LTR Gypsy 151 316 -278 1 782 21 0 0 0 chrUextra 25927844 25927865 -3076791 + AT_rich Low_complexity Low_complexity 1 21 0 1 782 2773 35 6 9 chrUextra 25927867 25928217 -3076439 - CIRCE LINE Composite -1027 5329 4981 1 782 2977 173 8 7 chrUextra 25928396 25929014 -3075642 - SAR_DM Satellite Satellite -478 994 376 1 782 5500 10 0 2 chrUextra 25929115 25929733 -3074923 - Gypsy4_I LTR Gypsy -3263 3025 2409 1 782 34 24 0 0 chrUextra 25930300 25930341 -3074315 + AT_rich Low_complexity Low_complexity 1 41 0 1 782 2697 35 47 0 chrUextra 25931271 25931609 -3073047 + TRANSIB2 DNA Transib 1496 1849 -995 1 782 1693 88 0 4 chrUextra 25931634 25931873 -3072783 + MICROPIA_I LTR Gypsy 3882 4119 -357 1 782 2865 178 11 8 chrUextra 25931990 25932608 -3072048 + SAR_DM Satellite Satellite 284 903 -569 1 782 5380 2 0 2 chrUextra 25932709 25933328 -3071328 - ROO_I LTR Pao -4241 4015 3398 1 782 5538 2 0 0 chrUextra 25933428 25934047 -3070609 - LSU-rRNA_Dme rRNA rRNA -2733 1167 549 1 782 5585 0 0 3 chrUextra 25934147 25934766 -3069890 + SSU-rRNA_Dme rRNA rRNA 548 1164 -831 1 782 476 204 17 17 chrUextra 25934866 25934981 -3069675 + HETRP_DM Satellite Satellite 1561 1675 -197 1 782 709 181 18 49 chrUextra 25935121 25935284 -3069372 + HETRP_DM Satellite Satellite 1518 1675 -197 1 782 279 139 0 0 chrUextra 25935442 25935485 -3069171 + HETRP_DM Satellite Satellite 1529 1571 -301 1 782 3029 174 7 7 chrUextra 25935585 25936204 -3068452 - SAR_DM Satellite Satellite -435 1037 419 1 782 2933 174 10 7 chrUextra 25936309 25936923 -3067733 + SAR_DM Satellite Satellite 246 861 -611 1 782 5326 14 0 0 chrUextra 25937023 25937642 -3067014 + STALKER4_I LTR Gypsy 1436 2054 -4476 1 782 5649 3 0 0 chrUextra 25937742 25938361 -3066295 + Invader6_I LTR Gypsy 327 945 -3154 1 782 5399 11 0 3 chrUextra 25938461 25939080 -3065576 - FW_DM LINE Jockey -2392 2300 1684 1 782 514 119 36 0 chrUextra 25939229 25939313 -3065343 - NTS_DM Other Other -150 90 4 1 782 1288 6 6 24 chrUextra 25939423 25939588 -3065068 - NTS_DM Other Other -78 162 1 1 782 1647 0 24 14 chrUextra 25939588 25939799 -3064857 - NTS_DM Other Other 0 240 28 1 782 1665 30 8 25 chrUextra 25939899 25940137 -3064519 + ROO_I LTR Pao 396 629 -7627 1 782 327 136 0 0 chrUextra 25940143 25940202 -3064454 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 782 495 45 0 0 chrUextra 25940202 25940269 -3064387 + ROO_I LTR Pao 730 796 -7460 1 782 1329 6 22 17 chrUextra 25940618 25940798 -3063858 + NTS_DM Other Other 60 240 0 1 782 1355 6 0 18 chrUextra 25940798 25940963 -3063693 + NTS_DM Other Other 1 162 -78 1 782 514 119 36 0 chrUextra 25941073 25941157 -3063499 + NTS_DM Other Other 4 90 -150 1 782 2615 181 10 26 chrUextra 25941337 25941956 -3062700 - SAR_DM Satellite Satellite -355 1117 509 1 782 730 124 0 0 chrUextra 25942056 25942177 -3062479 - ARS406_DM Unknown Unknown -232 121 1 1 782 2711 174 12 10 chrUextra 25942084 25942675 -3061981 + SAR_DM Satellite Satellite 195 786 -686 1 782 5628 0 0 2 chrUextra 25942775 25943394 -3061262 - LSU-rRNA_Dme rRNA rRNA -566 3334 2717 1 782 1940 99 0 39 chrUextra 25943494 25943799 -3060857 + Gypsy12_I LTR Gypsy 684 976 -4570 1 782 279 276 0 0 chrUextra 25943806 25943893 -3060763 + TOM_I LTR Gypsy 3276 3362 -2750 1 782 1075 159 10 29 chrUextra 25943906 25944113 -3060543 + Gypsy12_LTR LTR Gypsy 1 203 -2133 1 782 1861 108 362 6 chrUextra 25944213 25944697 -3059959 + FB4_DM DNA Tc1 414 1069 -3020 1 782 447 93 23 34 chrUextra 25944722 25944832 -3059824 - FB4_DM DNA Tc1 -3071 1018 932 1 782 2984 164 10 11 chrUextra 25944932 25945549 -3059107 - SAR_DM Satellite Satellite -620 852 237 1 782 731 119 0 0 chrUextra 25945651 25945769 -3058887 - ARS406_DM Unknown Unknown -235 118 1 1 782 2634 182 12 8 chrUextra 25945676 25946268 -3058388 + SAR_DM Satellite Satellite 195 788 -684 1 782 2522 83 23 16 chrUextra 25946370 25946983 -3057673 + DMSAT6 Satellite Satellite 1 616 -48 1 782 2792 181 8 8 chrUextra 25947094 25947705 -3056951 - SAR_DM Satellite Satellite -569 903 293 1 782 3566 242 52 28 chrUextra 25947809 25949060 -3055596 + SAR_DM Satellite Satellite 1 1282 -202 1 782 621 38 0 0 chrUextra 25949066 25949146 -3055510 - ARS406_DM Unknown Unknown -195 158 79 1 782 3760 15 3 103 chrUextra 25949246 25949858 -3054798 - DM176_I LTR Gypsy -5768 652 102 1 782 2982 181 10 5 chrUextra 25949968 25950584 -3054072 + SAR_DM Satellite Satellite 252 870 -602 1 782 1795 188 7 10 chrUextra 25950696 25951074 -3053582 + SAR_DM Satellite Satellite 1 507 -655 1 782 1115 76 0 0 chrUextra 25951074 25951232 -3053424 - ARS406_DM Unknown Unknown -195 158 1 1 782 1795 188 7 10 chrUextra 25951232 25951303 -3053353 + SAR_DM Satellite Satellite 508 604 -558 1 782 5523 0 0 2 chrUextra 25951403 25952022 -3052634 + R1_DM LINE R1 2610 3227 -2129 1 783 5117 13 11 2 chrUextra 25952840 25953458 -3051198 - ROO_I LTR Pao -4873 3383 2760 1 783 4919 34 45 10 chrUextra 25953558 25954174 -3050482 - FW_DM LINE Jockey -1965 2727 2090 1 783 3859 2 0 0 chrUextra 25954276 25954729 -3049927 + STALKER4_I LTR Gypsy 3222 3674 -2856 1 783 1378 19 0 18 chrUextra 25954729 25954894 -3049762 - BATUMI_I LTR Pao -679 7284 7123 1 783 5450 3 5 3 chrUextra 25954994 25955612 -3049044 + LSU-rRNA_Dme rRNA rRNA 1102 1720 -2180 1 783 5543 2 0 2 chrUextra 25955712 25956330 -3048326 + R1_DM LINE R1 1130 1746 -3610 1 783 1304 18 0 6 chrUextra 25956493 25956658 -3047998 - NTS_DM Other Other -39 201 38 1 783 907 9 0 27 chrUextra 25956658 25956770 -3047886 - NTS_DM Other Other -107 133 25 1 783 1304 18 0 6 chrUextra 25956822 25956987 -3047669 - NTS_DM Other Other -39 201 38 1 783 484 16 0 0 chrUextra 25956987 25957048 -3047608 - NTS_DM Other Other -107 133 73 1 783 299 130 19 0 chrUextra 25957148 25957202 -3047454 - ARS406_DM Unknown Unknown -298 55 1 1 783 3057 174 5 3 chrUextra 25957162 25957766 -3046890 + SAR_DM Satellite Satellite 246 850 -622 1 783 2435 107 27 42 chrUextra 25957886 25958483 -3046173 - DMSAT6 Satellite Satellite -3 587 1 1 783 5038 2 2 42 chrUextra 25958584 25959202 -3045454 - LSU-rRNA_Dme rRNA rRNA -3296 604 12 1 783 2772 171 15 15 chrUextra 25959308 25959914 -3044742 + SAR_DM Satellite Satellite 332 937 -535 1 783 4878 10 2 5 chrUextra 25960020 25960636 -3044020 + FB4_DM DNA Tc1 2858 3471 -618 1 783 2820 176 10 16 chrUextra 25960738 25961356 -3043300 + SAR_DM Satellite Satellite 379 992 -480 1 783 5519 10 0 0 chrUextra 25961456 25962071 -3042585 + MDG3_I LTR Gypsy 931 1545 -3441 1 783 1512 0 16 0 chrUextra 25962177 25962360 -3042296 + Invader4_I LTR Gypsy 2228 2413 0 1 783 3141 6 0 0 chrUextra 25962360 25962706 -3041950 + Invader4_LTR LTR Gypsy 1 346 0 1 783 39 0 0 0 chrUextra 25963258 25963297 -3041359 + AT_rich Low_complexity Low_complexity 1 39 0 1 783 514 119 36 0 chrUextra 25963685 25963769 -3040887 - NTS_DM Other Other -150 90 4 1 783 1307 12 0 24 chrUextra 25963879 25964045 -3040611 - NTS_DM Other Other -78 162 1 1 783 1358 6 22 16 chrUextra 25964045 25964228 -3040428 - NTS_DM Other Other 0 240 57 1 783 5395 3 3 5 chrUextra 25964331 25964946 -3039710 + LSU-rRNA_Dme rRNA rRNA 817 1430 -2470 1 783 2763 183 10 7 chrUextra 25965054 25965664 -3038992 + SAR_DM Satellite Satellite 195 806 -666 1 783 2963 169 11 13 chrUextra 25965764 25966376 -3038280 + SAR_DM Satellite Satellite 428 1038 -434 1 783 1970 97 190 17 chrUextra 25966501 25966908 -3037748 + PROTOP_B DNA P 1 478 -675 1 783 1534 88 0 0 chrUextra 25966885 25967100 -3037556 + HOBO DNA hAT 330 544 -2472 1 783 2746 179 11 13 chrUextra 25967200 25967810 -3036846 + SAR_DM Satellite Satellite 295 903 -569 1 783 5330 19 0 0 chrUextra 25967919 25968536 -3036120 - R1_DM LINE R1 -866 4490 3874 1 783 2401 97 21 24 chrUextra 25968640 25969253 -3035403 - DMSAT6 Satellite Satellite -3 611 1 1 783 5317 19 0 7 chrUextra 25969354 25969972 -3034684 - Gypsy12_I LTR Gypsy -3140 2406 1793 1 783 5310 23 0 3 chrUextra 25970072 25970690 -3033966 - R1_DM LINE R1 -2933 2423 1808 1 783 2900 174 11 15 chrUextra 25971510 25972122 -3032534 - SAR_DM Satellite Satellite -464 1008 399 1 783 5577 3 2 0 chrUextra 25972226 25972844 -3031812 + LSU-rRNA_Dme rRNA rRNA 1814 2432 -1468 1 783 5584 5 0 0 chrUextra 25972944 25973562 -3031094 - LSU-rRNA_Dme rRNA rRNA -1351 2549 1932 1 783 2774 177 31 11 chrUextra 25973662 25974280 -3030376 + SAR_DM Satellite Satellite 439 1068 -404 1 783 383 56 0 0 chrUextra 25974380 25974434 -3030222 + ARS406_DM Unknown Unknown 105 158 -195 1 783 2781 170 18 5 chrUextra 25974431 25974998 -3029658 - SAR_DM Satellite Satellite -558 914 341 1 783 3019 175 8 5 chrUextra 25975098 25975714 -3028942 + SAR_DM Satellite Satellite 268 885 -587 1 783 303 330 182 0 chrUextra 25976250 25976426 -3028230 + Invader6_I LTR Gypsy 1982 2189 -1910 1 783 5456 13 0 0 chrUextra 25976534 25977152 -3027504 + STALKER4_I LTR Gypsy 3647 4264 -2266 1 783 3079 167 8 5 chrUextra 25977252 25977859 -3026797 - SAR_DM Satellite Satellite -539 933 325 1 783 353 102 17 0 chrUextra 25978688 25978747 -3025909 - ARS406_DM Unknown Unknown -293 60 1 1 783 3718 270 30 22 chrUextra 25978707 25980024 -3024632 + SAR_DM Satellite Satellite 1 1327 -242 1 783 4935 4 0 0 chrUextra 25980124 25980668 -3023988 + LSU-rRNA_Dme rRNA rRNA 2113 2656 -1244 1 783 736 0 0 0 chrUextra 25980662 25980742 -3023914 + R1_DM LINE R1 4831 4910 -446 1 783 3276 16 2 29 chrUextra 25980846 25981301 -3023355 - PROTOP DNA P -3650 830 388 1 783 1347 38 0 0 chrUextra 25981300 25981460 -3023196 - PROTOP DNA P -4200 280 121 1 783 2741 240 28 12 chrUextra 25981561 25982888 -3021768 - SAR_DM Satellite Satellite -645 1348 1 1 783 225 191 0 0 chrUextra 25982849 25982896 -3021760 + ARS406_DM Unknown Unknown 1 47 -306 1 783 2507 108 140 5 chrUextra 25982996 25983614 -3021042 + BATUMI_I LTR Pao 4157 4934 -3029 1 783 1681 45 22 0 chrUextra 25983715 25983938 -3020718 + QUASIMODO_I LTR Gypsy 4947 5174 -886 1 783 1685 62 16 0 chrUextra 25983928 25984185 -3020471 + QUASIMODO_I LTR Gypsy 5467 5727 -333 1 783 5248 18 3 3 chrUextra 25984432 25985050 -3019606 - R1_DM LINE R1 -1463 3893 3276 1 783 893 19 0 0 chrUextra 25985150 25985257 -3019399 - NTS_DM Other Other -96 144 38 1 783 907 9 0 27 chrUextra 25985257 25985369 -3019287 - NTS_DM Other Other -107 133 25 1 783 1304 18 0 6 chrUextra 25985421 25985586 -3019070 - NTS_DM Other Other -39 201 38 1 783 907 9 0 27 chrUextra 25985586 25985698 -3018958 - NTS_DM Other Other -107 133 25 1 783 22 56 0 0 chrUextra 25985724 25985760 -3018896 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 25 0 0 0 chrUextra 25986346 25986371 -3018285 + AT_rich Low_complexity Low_complexity 1 25 0 1 783 2935 176 15 8 chrUextra 25986586 25987204 -3017452 - SAR_DM Satellite Satellite -425 1047 426 1 783 5624 0 0 2 chrUextra 25987304 25987922 -3016734 - LSU-rRNA_Dme rRNA rRNA -690 3210 2594 1 783 4426 42 0 0 chrUextra 25988114 25988640 -3016016 - BATUMI_I LTR Pao -3642 4321 3796 1 783 2780 172 57 10 chrUextra 25988741 25989358 -3015298 - SAR_DM Satellite Satellite -478 994 349 1 783 351 113 0 0 chrUextra 25989460 25989513 -3015143 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 1 783 4569 24 0 2 chrUextra 25990176 25990715 -3013941 + DOC2_DM LINE Jockey 4256 4793 0 1 783 3643 81 172 5 chrUextra 25990942 25991501 -3013155 - Gypsy12_I LTR Gypsy 0 5546 4895 1 783 5083 18 3 5 chrUextra 25991612 25992230 -3012426 + Invader3_I LTR Gypsy 4097 4713 -175 1 783 1047 0 0 8 chrUextra 25992330 25992448 -3012208 + LSU-rRNA_Dme rRNA rRNA 3784 3900 0 1 783 22 56 0 0 chrUextra 25992520 25992556 -3012100 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 262 150 0 0 chrUextra 25992561 25992601 -3012055 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 262 150 0 0 chrUextra 25992653 25992693 -3011963 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 262 150 0 0 chrUextra 25992745 25992785 -3011871 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 269 125 0 0 chrUextra 25992828 25992868 -3011788 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 22 56 0 0 chrUextra 25992881 25992917 -3011739 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 892 88 0 0 chrUextra 25993051 25993188 -3011468 + ARS406_DM Unknown Unknown 22 158 -195 1 783 2348 176 8 8 chrUextra 25993185 25993666 -3010990 - SAR_DM Satellite Satellite -558 914 434 1 783 5055 31 2 8 chrUextra 25993766 25994384 -3010272 + BATUMI_I LTR Pao 2797 3410 -4553 1 783 5241 28 0 0 chrUextra 25994484 25995102 -3009554 + NINJA_I LTR Pao 2009 2626 -3385 1 783 5198 36 0 2 chrUextra 25995203 25995817 -3008839 + R1_DM LINE R1 1307 1919 -3437 1 783 2315 91 5 37 chrUextra 25995920 25996537 -3008119 - DMSAT6 Satellite Satellite -163 596 1 1 783 2590 188 17 10 chrUextra 25996637 25997233 -3007423 + SAR_DM Satellite Satellite 477 1076 -396 1 783 1161 0 0 0 chrUextra 25997483 25997612 -3007044 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 1 783 1554 65 0 0 chrUextra 25997626 25997969 -3006687 + (TAGA)n Simple_repeat Simple_repeat 1 343 0 1 783 2485 97 9 66 chrUextra 25998076 25998652 -3006004 - DMSAT6 Satellite Satellite -37 542 1 1 783 4708 56 2 13 chrUextra 25998788 25999405 -3005251 - R1_DM LINE R1 -4592 764 155 1 783 2371 171 6 8 chrUextra 25999506 25999984 -3004672 - SAR_DM Satellite Satellite -416 1056 580 1 783 803 78 0 0 chrUextra 26000000 26000115 -3004541 + ARS406_DM Unknown Unknown 75 189 -164 1 783 5167 11 2 0 chrUextra 26000225 26000839 -3003817 - FW_DM LINE Jockey -3420 1272 658 1 783 2687 179 10 8 chrUextra 26001656 26002270 -3002386 + SAR_DM Satellite Satellite 380 994 -478 1 783 5015 10 2 2 chrUextra 26002373 26002990 -3001666 - QUASIMODO_I LTR Gypsy -868 5192 4576 1 783 4900 26 2 3 chrUextra 26003090 26003707 -3000949 + R1_DM LINE R1 2395 3010 -2346 1 783 1174 24 0 18 chrUextra 26003871 26004038 -3000618 - NTS_DM Other Other -39 201 38 1 783 850 18 0 27 chrUextra 26004038 26004150 -3000506 - NTS_DM Other Other -107 133 25 1 783 22 56 0 0 chrUextra 26004176 26004212 -3000444 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 243 125 0 0 chrUextra 26004225 26004265 -3000391 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 783 4430 31 28 7 chrUextra 26004524 26005141 -2999515 - PROTOP DNA P -3335 1145 516 1 783 3044 103 70 34 chrUextra 26005244 26005858 -2998798 + STALKER4_I LTR Gypsy 629 1264 -5266 1 783 2927 53 0 10 chrUextra 26005958 26006360 -2998296 + PROTOP_A DNA P 708 1105 0 1 783 759 126 154 0 chrUextra 26006360 26006503 -2998153 - DNAREP1_DM LINE Penelope -20 574 410 1 783 479 100 0 0 chrUextra 26006497 26006567 -2998089 - DNAREP1_DM LINE Penelope -490 104 35 1 783 975 74 20 0 chrUextra 26006675 26006823 -2997833 + ARS406_DM Unknown Unknown 39 189 -164 1 783 2731 162 17 8 chrUextra 26006700 26007292 -2997364 - SAR_DM Satellite Satellite -535 937 341 1 783 2507 175 53 10 chrUextra 26008109 26008716 -2995940 - SAR_DM Satellite Satellite -471 1001 369 1 783 4596 23 68 5 chrUextra 26008826 26009443 -2995213 + DMRT1B LINE R1 1078 1733 -3450 1 783 4512 18 8 2 chrUextra 26009554 26010160 -2994496 + TART LINE telomeric 9212 9821 -4656 1 783 886 87 6 37 chrUextra 26010260 26010450 -2994206 + Gypsy8_LTR LTR Gypsy 54 304 0 1 783 1238 128 8 45 chrUextra 26010424 26010669 -2993987 + Gypsy8_I LTR Gypsy 1 236 -4111 1 783 360 107 0 0 chrUextra 26011063 26011119 -2993537 + DNAREP1_DM LINE Penelope 386 441 -153 1 783 870 9 0 27 chrUextra 26011733 26011845 -2992811 + NTS_DM Other Other 25 133 -107 1 783 1192 18 0 18 chrUextra 26011845 26012012 -2992644 + NTS_DM Other Other 38 201 -39 1 783 22 35 0 0 chrUextra 26012012 26012041 -2992615 + AT_rich Low_complexity Low_complexity 1 29 0 1 783 378 35 0 17 chrUextra 26012056 26012114 -2992542 + NTS_DM Other Other 145 201 -39 1 783 870 9 0 27 chrUextra 26012166 26012278 -2992378 + NTS_DM Other Other 25 133 -107 1 783 264 30 0 0 chrUextra 26012278 26012311 -2992345 + NTS_DM Other Other 38 70 -170 1 783 488 119 36 0 chrUextra 26012485 26012569 -2992087 - NTS_DM Other Other -150 90 4 1 783 1301 6 0 18 chrUextra 26012679 26012844 -2991812 - NTS_DM Other Other -78 162 1 1 783 1307 11 22 16 chrUextra 26012844 26013028 -2991628 - NTS_DM Other Other 0 240 56 1 783 5208 2 0 0 chrUextra 26013128 26013722 -2990934 - LSU-rRNA_Dme rRNA rRNA -667 3233 2640 1 783 2653 174 13 8 chrUextra 26013845 26014447 -2990209 - SAR_DM Satellite Satellite -542 930 326 1 783 1192 25 0 18 chrUextra 26014562 26014727 -2989929 - NTS_DM Other Other -78 162 1 1 783 1756 17 17 17 chrUextra 26014727 26014967 -2989689 - NTS_DM Other Other 0 240 1 1 783 1504 19 19 19 chrUextra 26014967 26015179 -2989477 - NTS_DM Other Other 0 240 29 1 783 246 150 0 0 chrUextra 26015358 26015398 -2989258 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 783 22 56 0 0 chrUextra 26015403 26015439 -2989217 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 3381 0 0 0 chrUextra 26015511 26015896 -2988760 - LSU-rRNA_Dme rRNA rRNA 0 3900 3516 1 783 4308 6 4 0 chrUextra 26015996 26016501 -2988155 - R1_DM LINE R1 -4849 507 1 1 783 455 36 0 0 chrUextra 26016501 26016556 -2988100 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 783 480 0 0 0 chrUextra 26016552 26016613 -2988043 - R2_DM LINE R2 -2 3605 3545 1 783 369 0 0 0 chrUextra 26016713 26016754 -2987902 + (TTCTC)n Simple_repeat Simple_repeat 5 45 0 1 783 1020 39 0 0 chrUextra 26017919 26018047 -2986609 + PROTOP_B DNA P 74 201 -952 1 783 32 0 0 0 chrUextra 26018208 26018240 -2986416 + AT_rich Low_complexity Low_complexity 1 32 0 1 783 3433 3 0 0 chrUextra 26018372 26018764 -2985892 + SSU-rRNA_Dme rRNA rRNA 1 392 -1603 1 783 369 66 234 13 chrUextra 26018864 26018938 -2985718 - BATUMI_I LTR Pao -871 7092 7002 1 783 4190 37 0 6 chrUextra 26018938 26019481 -2985175 - BATUMI_I LTR Pao 0 7963 7424 1 783 2348 115 7 21 chrUextra 26019615 26020198 -2984458 - DMSAT6 Satellite Satellite 0 574 1 1 783 798 189 0 0 chrUextra 26020309 26020484 -2984172 + (TATG)n Simple_repeat Simple_repeat 2 176 0 1 783 234 203 125 0 chrUextra 26020486 26020550 -2984106 + OSVALDO_LTR LTR Gypsy 12 83 -1113 1 783 865 192 0 6 chrUextra 26020559 26020915 -2983741 + (TATG)n Simple_repeat Simple_repeat 1 354 0 1 783 3554 54 42 2 chrUextra 26021088 26021632 -2983024 - PROTOP_A DNA P 0 1105 570 1 783 2318 95 24 26 chrUextra 26021732 26022349 -2982307 + DMSAT6 Satellite Satellite 1 616 -51 1 783 2518 188 8 10 chrUextra 26022449 26023060 -2981596 + SAR_DM Satellite Satellite 467 1076 -396 1 783 1931 263 15 15 chrUextra 26023167 26023781 -2980875 - G6_DM LINE Jockey -879 1163 550 1 783 5142 2 2 2 chrUextra 26023883 26024500 -2980156 + R1_DM LINE R1 617 1233 -4123 1 783 5263 2 0 0 chrUextra 26024600 26025217 -2979439 + ROO_I LTR Pao 4827 5443 -2813 1 783 2073 38 0 4 chrUextra 26026034 26026298 -2978358 + MAX_I LTR Pao 2562 2824 -5090 1 783 2996 22 0 0 chrUextra 26026290 26026651 -2978005 + MAX_I LTR Pao 3152 3512 -4402 1 783 3683 0 0 2 chrUextra 26027662 26028085 -2976571 - ROO_LTR LTR Pao 0 428 7 1 783 1124 24 23 23 chrUextra 26028902 26029076 -2975580 + NTS_DM Other Other 67 240 0 1 783 1704 21 17 21 chrUextra 26029076 26029317 -2975339 + NTS_DM Other Other 1 240 0 1 783 1128 8 0 0 chrUextra 26029317 26029450 -2975206 + NTS_DM Other Other 1 133 -107 1 783 598 0 0 0 chrUextra 26029450 26029519 -2975137 + NTS_DM Other Other 38 106 -134 1 783 304 302 0 0 chrUextra 26029621 26029727 -2974929 - Invader2_I LTR Gypsy -1863 2729 2624 1 783 269 305 65 65 chrUextra 26029740 26030157 -2974499 - BLASTOPIA_I LTR Gypsy -1885 2596 2180 1 783 2751 166 11 11 chrUextra 26030336 26030953 -2973703 - SAR_DM Satellite Satellite -480 992 376 1 783 2442 192 8 11 chrUextra 26031770 26032387 -2972269 - SAR_DM Satellite Satellite -1078 614 1 1 783 2257 8 0 0 chrUextra 26032487 26032752 -2971904 - FW_DM LINE Jockey -2030 2662 2398 1 783 413 79 0 0 chrUextra 26032748 26032811 -2971845 + PROTOP_B DNA P 238 300 -853 1 783 1191 52 87 0 chrUextra 26032798 26033104 -2971552 + PROTOP_B DNA P 520 754 -399 1 783 702 22 11 0 chrUextra 26033204 26033294 -2971362 + DOC2_DM LINE Jockey 3833 3923 -870 1 783 4486 9 2 0 chrUextra 26033292 26033821 -2970835 + DOC2_DM LINE Jockey 1852 2381 -2412 1 783 4914 8 29 0 chrUextra 26033950 26034538 -2970118 + G2_DM LINE Jockey 4 608 -2494 1 783 1620 0 0 0 chrUextra 26034638 26035027 -2969629 + (GAGAA)n Simple_repeat Simple_repeat 1 389 0 1 783 1074 262 34 34 chrUextra 26035355 26035861 -2968795 + SAR_DM Satellite Satellite 246 751 -721 1 783 245 210 16 16 chrUextra 26036072 26036135 -2968521 + HETRP_DM Satellite Satellite 1607 1669 -203 1 783 192 40 0 0 chrUextra 26036266 26036291 -2968365 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 783 491 208 8 16 chrUextra 26036291 26036413 -2968243 + HETRP_DM Satellite Satellite 1549 1669 -203 1 783 507 196 0 9 chrUextra 26036580 26036688 -2967968 + HETRP_DM Satellite Satellite 1529 1635 -237 1 783 28 48 0 0 chrUextra 26037014 26037056 -2967600 + AT_rich Low_complexity Low_complexity 1 42 0 1 783 21 0 0 0 chrUextra 26037385 26037406 -2967250 + AT_rich Low_complexity Low_complexity 1 21 0 1 783 2969 11 3 24 chrUextra 26037518 26037893 -2966763 + ROVER-LTR_DM LTR Gypsy 1 367 0 1 783 1048 16 0 0 chrUextra 26037893 26038016 -2966640 + ROVER-I_DM LTR Gypsy 1 123 -6461 1 783 459 18 0 0 chrUextra 26038067 26038123 -2966533 + ROVER-I_DM LTR Gypsy 103 158 -6426 1 783 823 18 0 35 chrUextra 26038225 26038338 -2966318 - NTS_DM Other Other -107 133 25 1 783 1252 18 0 6 chrUextra 26038390 26038555 -2966101 - NTS_DM Other Other -39 201 38 1 783 870 9 0 27 chrUextra 26038555 26038667 -2965989 - NTS_DM Other Other -107 133 25 1 783 818 25 0 8 chrUextra 26038719 26038840 -2965816 - NTS_DM Other Other -39 201 82 1 783 965 27 26 20 chrUextra 26038940 26039091 -2965565 + NTS_DM Other Other 89 240 0 1 783 1128 8 0 0 chrUextra 26039091 26039224 -2965432 + NTS_DM Other Other 1 133 -107 1 783 1252 18 0 6 chrUextra 26039224 26039389 -2965267 + NTS_DM Other Other 38 201 -39 1 783 21 57 0 0 chrUextra 26039389 26039424 -2965232 + AT_rich Low_complexity Low_complexity 1 35 0 1 783 774 10 19 28 chrUextra 26039450 26039557 -2965099 + NTS_DM Other Other 25 130 -110 1 783 5230 0 0 0 chrUextra 26039657 26040274 -2964382 - Invader3_I LTR Gypsy -236 4652 4036 1 783 260 277 115 93 chrUextra 26040559 26040838 -2963818 + Invader1_LTR LTR Gypsy 84 368 -55 1 783 5266 2 3 3 chrUextra 26041091 26041708 -2962948 + LSU-rRNA_Dme rRNA rRNA 932 1548 -2352 1 783 2190 193 78 16 chrUextra 26041809 26042424 -2962232 + SAR_DM Satellite Satellite 604 1256 -216 1 783 5161 7 0 3 chrUextra 26042525 26043141 -2961515 - DOC LINE Jockey -1663 3062 2449 1 783 3943 43 34 62 chrUextra 26043242 26043857 -2960799 - BATUMI_I LTR Pao -4838 3125 2528 1 783 2520 170 32 7 chrUextra 26043973 26044570 -2960086 + SAR_DM Satellite Satellite 349 960 -512 1 783 2422 97 21 21 chrUextra 26044673 26045287 -2959369 + DMSAT6 Satellite Satellite 1 614 -74 1 783 1362 56 0 0 chrUextra 26045814 26045994 -2958662 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 783 2555 188 5 7 chrUextra 26046105 26046701 -2957955 - SAR_DM Satellite Satellite -683 789 195 1 783 718 97 0 0 chrUextra 26046608 26046721 -2957935 + ARS406_DM Unknown Unknown 1 113 -240 1 783 1186 110 5 5 chrUextra 26046821 26047013 -2957643 + BS2 LINE Jockey 66 257 -4464 1 783 1797 44 12 8 chrUextra 26047012 26047266 -2957390 - G5_DM LINE Jockey 0 4856 4602 1 783 1298 58 12 0 chrUextra 26047263 26047436 -2957220 - G5_DM LINE Jockey -489 4367 4193 1 783 1598 301 10 16 chrUextra 26047537 26048148 -2956508 - MICROPIA_I LTR Gypsy -1073 3403 2797 1 783 4941 29 0 2 chrUextra 26048253 26048869 -2955787 - DMCR1A LINE CR1 -1691 2779 2165 1 783 5164 2 0 2 chrUextra 26048970 26049567 -2955089 - LSU-rRNA_Dme rRNA rRNA -1517 2383 1788 1 783 1267 7 0 0 chrUextra 26049685 26049835 -2954821 + MDG1_I LTR Gypsy 5718 5867 -729 1 783 714 54 222 45 chrUextra 26049841 26050023 -2954633 + MDG1_I LTR Gypsy 6393 6596 0 1 783 372 88 0 0 chrUextra 26050029 26050086 -2954570 + (TAA)n Simple_repeat Simple_repeat 3 59 0 1 783 1419 75 103 0 chrUextra 26050088 26050301 -2954355 + MDG1_LTR LTR Gypsy 94 328 -114 1 783 5227 3 2 3 chrUextra 26050404 26051017 -2953639 + LSU-rRNA_Dme rRNA rRNA 954 1565 -2335 1 783 2596 181 32 11 chrUextra 26051117 26051733 -2952923 + SAR_DM Satellite Satellite 257 885 -587 1 783 4920 2 0 0 chrUextra 26051833 26052407 -2952249 + FW_DM LINE Jockey 4119 4692 0 1 783 331 24 0 0 chrUextra 26052407 26052449 -2952207 - DOC2_DM LINE Jockey -4037 756 715 1 783 5119 0 2 3 chrUextra 26052549 26053165 -2951491 - LSU-rRNA_Dme rRNA rRNA -3061 839 225 1 783 4624 47 2 2 chrUextra 26053265 26053881 -2950775 + MDG3_I LTR Gypsy 1194 1809 -3177 1 783 2776 172 10 10 chrUextra 26053981 26054597 -2950059 + SAR_DM Satellite Satellite 422 1037 -435 1 783 5191 11 3 0 chrUextra 26054700 26055313 -2949343 - MDG3_I LTR Gypsy -3396 1590 976 1 783 2199 111 28 40 chrUextra 26055422 26056004 -2948652 - DMSAT6 Satellite Satellite -89 574 1 1 783 357 129 14 14 chrUextra 26056129 26056200 -2948456 + ARS406_DM Unknown Unknown 119 189 -164 1 783 3039 276 53 29 chrUextra 26056156 26057461 -2947195 - SAR_DM Satellite Satellite -261 1336 1 1 783 2335 104 26 21 chrUextra 26057564 26058176 -2946480 - DMSAT6 Satellite Satellite -268 614 1 1 783 219 33 0 116 chrUextra 26058277 26058346 -2946310 + (TTTTTA)n Simple_repeat Simple_repeat 4 64 0 1 783 2302 50 96 65 chrUextra 26058993 26059608 -2945048 + ROO_I LTR Pao 536 1592 -6664 1 783 2688 184 10 5 chrUextra 26059709 26060325 -2944331 + SAR_DM Satellite Satellite 256 874 -598 1 783 5049 28 0 0 chrUextra 26060425 26061041 -2943615 - R1_DM LINE R1 -1963 3393 2778 1 783 27 29 0 0 chrUextra 26061550 26061584 -2943072 + AT_rich Low_complexity Low_complexity 1 34 0 1 783 4869 3 0 26 chrUextra 26061857 26062473 -2942183 - ROO_I LTR Pao -7477 779 180 1 783 1813 273 13 23 chrUextra 26062573 26063188 -2941468 + Invader4_I LTR Gypsy 240 848 -1565 1 783 1286 65 59 0 chrUextra 26063290 26063476 -2941180 - MAX_LTR LTR Pao -124 197 1 1 783 2680 40 0 0 chrUextra 26063479 26063827 -2940829 - MAX_I LTR Pao -1 7913 7566 1 783 767 22 0 0 chrUextra 26063813 26063905 -2940751 - MAX_I LTR Pao -2848 5066 4975 1 783 1339 0 0 24 chrUextra 26064005 26064173 -2940483 - Gypsy_I LTR Gypsy -6343 164 1 1 783 3643 29 4 2 chrUextra 26064171 26064621 -2940035 - Gypsy_LTR LTR Gypsy 0 482 32 1 783 519 44 0 0 chrUextra 26064726 26064794 -2939862 - R1_DM LINE R1 -5288 68 1 1 783 4253 16 2 0 chrUextra 26064827 26065337 -2939319 - R1_DM LINE R1 0 5356 4846 1 783 21 95 0 0 chrUextra 26065495 26065558 -2939098 + AT_rich Low_complexity Low_complexity 1 63 0 1 783 3760 0 0 54 chrUextra 26065570 26066053 -2938603 + LSU-rRNA_Dme rRNA rRNA 1 457 -3443 1 783 5107 0 2 3 chrUextra 26066153 26066769 -2937887 + R1_DM LINE R1 617 1231 -4125 1 783 2673 182 8 5 chrUextra 26066869 26067483 -2937173 - SAR_DM Satellite Satellite -620 852 237 1 783 764 11 11 0 chrUextra 26067585 26067680 -2936976 + NTS_DM Other Other 38 133 -107 1 783 1252 18 0 6 chrUextra 26067680 26067845 -2936811 + NTS_DM Other Other 38 201 -39 1 783 870 9 0 27 chrUextra 26067897 26068009 -2936647 + NTS_DM Other Other 25 133 -107 1 783 1252 18 0 6 chrUextra 26068009 26068174 -2936482 + NTS_DM Other Other 38 201 -39 1 783 2360 99 13 34 chrUextra 26068301 26068917 -2935739 + DMSAT6 Satellite Satellite 1 602 -85 1 783 2832 168 10 10 chrUextra 26069018 26069633 -2935023 - SAR_DM Satellite Satellite -439 1033 419 1 783 2807 159 12 12 chrUextra 26069733 26070339 -2934317 + SAR_DM Satellite Satellite 389 994 -478 1 783 726 0 0 0 chrUextra 26070449 26070536 -2934120 + NTS_DM Other Other 47 133 -107 1 783 1361 25 20 25 chrUextra 26070536 26070740 -2933916 + NTS_DM Other Other 38 240 0 1 783 1734 21 17 17 chrUextra 26070740 26070980 -2933676 + NTS_DM Other Other 1 240 0 1 783 732 12 0 0 chrUextra 26070980 26071065 -2933591 + NTS_DM Other Other 1 85 -155 1 783 3060 104 68 34 chrUextra 26071165 26071781 -2932875 - STALKER4_I LTR Gypsy -5260 1270 634 1 783 5133 24 0 0 chrUextra 26071881 26072497 -2932159 - MAX_I LTR Pao -5466 2448 1833 1 783 478 0 0 0 chrUextra 26072599 26072654 -2932002 - NTS_DM Other Other -148 92 38 1 783 870 9 0 27 chrUextra 26072654 26072766 -2931890 - NTS_DM Other Other -107 133 25 1 783 1252 18 0 6 chrUextra 26072819 26072984 -2931672 - NTS_DM Other Other -39 201 38 1 783 870 9 0 27 chrUextra 26072984 26073096 -2931560 - NTS_DM Other Other -107 133 25 1 783 22 56 0 0 chrUextra 26073122 26073158 -2931498 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 255 125 0 0 chrUextra 26073171 26073211 -2931445 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 783 1494 74 8 2 chrUextra 26073313 26073929 -2930727 + (CTATT)n Simple_repeat Simple_repeat 1 619 0 1 783 4784 26 18 0 chrUextra 26074029 26074645 -2930011 + ROO_I LTR Pao 686 1312 -6944 1 783 5144 8 2 3 chrUextra 26074745 26075361 -2929295 - R1_DM LINE R1 -1339 4017 3403 1 783 5239 2 5 3 chrUextra 26076893 26077509 -2927147 - SSU-rRNA_Dme rRNA rRNA -268 1727 1111 1 783 34 24 0 0 chrUextra 26077860 26077901 -2926755 + AT_rich Low_complexity Low_complexity 1 41 0 1 783 24 91 0 0 chrUextra 26078111 26078177 -2926479 + AT_rich Low_complexity Low_complexity 1 66 0 1 783 296 0 0 0 chrUextra 26078189 26078225 -2926431 + LSU-rRNA_Dme rRNA rRNA 1 36 -3864 1 783 2753 179 10 8 chrUextra 26078325 26078938 -2925718 + SAR_DM Satellite Satellite 434 1047 -425 1 783 5221 3 3 3 chrUextra 26079041 26079657 -2924999 - LSU-rRNA_Dme rRNA rRNA -2257 1643 1028 1 783 920 73 9 22 chrUextra 26079757 26080324 -2924332 + RSP Satellite Satellite 1 559 0 1 783 5157 3 0 0 chrUextra 26080473 26081089 -2923567 - ROO_I LTR Pao -4190 4066 3451 1 783 2771 170 10 8 chrUextra 26081194 26081804 -2922852 + SAR_DM Satellite Satellite 369 979 -493 1 783 886 54 15 0 chrUextra 26081905 26082023 -2922633 - NINJA_I LTR Pao -5227 784 665 1 783 4319 2 0 0 chrUextra 26082023 26082521 -2922135 - ACCORD_LTR LTR Gypsy 0 558 61 1 783 1620 16 0 12 chrUextra 26082621 26083222 -2921434 + (AGATG)n Simple_repeat Simple_repeat 1 594 0 1 784 28 48 0 0 chrUextra 26083622 26083664 -2920992 + AT_rich Low_complexity Low_complexity 1 42 0 1 784 424 0 36 0 chrUextra 26083883 26083939 -2920717 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 784 2224 146 178 43 chrUextra 26084065 26084667 -2919989 + TART LINE telomeric 9549 10231 -4246 1 784 1509 0 0 0 chrUextra 26085485 26085665 -2918991 - NTS_DM Other Other -60 180 1 1 784 1868 4 12 12 chrUextra 26085665 26085905 -2918751 - NTS_DM Other Other 0 240 1 1 784 1331 26 20 20 chrUextra 26085905 26086101 -2918555 - NTS_DM Other Other 0 240 45 1 784 4597 54 0 2 chrUextra 26086202 26086817 -2917839 + TAHRE LINE telomeric 5752 6365 -4098 1 784 2947 119 28 39 chrUextra 26086917 26087527 -2917129 + TART LINE telomeric 9547 10149 -4328 1 784 1158 7 0 0 chrUextra 26087633 26087772 -2916884 + R1_DM LINE R1 4928 5066 -290 1 784 936 27 0 0 chrUextra 26087771 26087883 -2916773 + R1_DM LINE R1 5245 5356 0 1 784 2388 54 15 6 chrUextra 26087916 26088249 -2916407 + R1_DM LINE R1 1 336 -5020 1 784 21 0 0 0 chrUextra 26088376 26088397 -2916259 + AT_rich Low_complexity Low_complexity 1 21 0 1 784 2608 69 8 3 chrUextra 26088428 26088790 -2915866 + Gypsy10_LTR LTR Gypsy 1 364 0 1 784 1154 109 0 0 chrUextra 26088790 26088965 -2915691 + Gypsy10_I LTR Gypsy 1 175 -5103 1 784 4841 28 55 0 chrUextra 26089065 26089681 -2914975 - R1_DM LINE R1 -2175 3181 2532 1 784 4645 18 9 0 chrUextra 26090547 26091110 -2913546 - R1_DM LINE R1 0 5356 4789 1 784 4707 31 45 2 chrUextra 26091213 26091820 -2912836 - R1_DM LINE R1 -1808 3548 2916 1 784 2619 173 12 10 chrUextra 26091950 26092545 -2912111 - SAR_DM Satellite Satellite -396 1076 481 1 784 2513 161 20 46 chrUextra 26092646 26093259 -2911397 + SAR_DM Satellite Satellite 274 870 -602 1 784 3329 241 17 42 chrUextra 26093366 26094693 -2909963 - SAR_DM Satellite Satellite -872 1293 1 1 784 2866 169 7 8 chrUextra 26094799 26095409 -2909247 + SAR_DM Satellite Satellite 425 1033 -439 1 784 345 0 0 22 chrUextra 26095509 26095554 -2909102 + LSU-rRNA_Dme rRNA rRNA 1745 1788 -2112 1 784 4552 2 0 2 chrUextra 26095598 26096124 -2908532 + LSU-rRNA_Dme rRNA rRNA 1788 2312 -1588 1 784 2538 171 13 18 chrUextra 26096224 26096839 -2907817 - SAR_DM Satellite Satellite -486 986 375 1 784 5253 0 2 5 chrUextra 26096939 26097554 -2907102 + SSU-rRNA_Dme rRNA rRNA 786 1398 -597 1 784 2796 180 8 5 chrUextra 26097654 26098267 -2906389 + SAR_DM Satellite Satellite 256 870 -602 1 784 567 0 0 0 chrUextra 26098369 26098432 -2906224 + (GAGAA)n Simple_repeat Simple_repeat 4 66 0 1 784 2052 183 10 10 chrUextra 26099084 26099685 -2904971 + SAR_DM Satellite Satellite 1 601 -677 1 784 5048 24 2 0 chrUextra 26099799 26100414 -2904242 - R1_DM LINE R1 -693 4663 4048 1 784 5299 2 2 2 chrUextra 26100514 26101129 -2903527 - LSU-rRNA_Dme rRNA rRNA -1339 2561 1947 1 784 3254 57 283 2 chrUextra 26101944 26102559 -2902097 + DOC4_DM LINE Jockey 771 1558 -1233 1 784 1921 187 9 11 chrUextra 26102666 26103130 -2901526 - SAR_DM Satellite Satellite -514 958 496 1 784 644 63 53 0 chrUextra 26103135 26103230 -2901426 + ARS406_DM Unknown Unknown 90 189 -164 1 784 612 150 39 16 chrUextra 26103145 26103274 -2901382 - SAR_DM Satellite Satellite -569 903 772 1 784 5263 0 3 3 chrUextra 26104089 26104704 -2899952 - SSU-rRNA_Dme rRNA rRNA -578 1417 803 1 784 5335 0 0 2 chrUextra 26105519 26106134 -2898522 - SSU-rRNA_Dme rRNA rRNA -923 1072 459 1 784 2664 174 8 8 chrUextra 26106238 26106846 -2897810 + SAR_DM Satellite Satellite 288 895 -577 1 784 4152 79 78 13 chrUextra 26106949 26107564 -2897092 + Gypsy12_I LTR Gypsy 4640 5294 -252 1 784 5220 3 2 3 chrUextra 26107664 26108279 -2896377 + LSU-rRNA_Dme rRNA rRNA 785 1398 -2502 1 784 1225 13 7 0 chrUextra 26108379 26108531 -2896125 - Stalker3_LTR LTR Gypsy -219 153 1 1 784 281 59 0 44 chrUextra 26108531 26108601 -2896055 - STALKER4_I LTR Gypsy 0 6530 6491 1 784 183 114 0 0 chrUextra 26108611 26108646 -2896010 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 784 3159 68 27 2 chrUextra 26109094 26109536 -2895120 + R1_DM LINE R1 938 1390 -3966 1 784 1231 35 0 0 chrUextra 26109537 26109709 -2894947 - FW_DM LINE Jockey -4 4688 4517 1 784 2195 195 29 10 chrUextra 26109809 26110405 -2894251 - SAR_DM Satellite Satellite -676 796 190 1 784 492 188 0 8 chrUextra 26110306 26110424 -2894232 + ARS406_DM Unknown Unknown 1 117 -236 1 784 2878 25 22 3 chrUextra 26110524 26110883 -2893773 + DMCR1A LINE CR1 1038 1403 -3067 1 784 1946 21 4 0 chrUextra 26110903 26111139 -2893517 + DMCR1A LINE CR1 2915 3151 -1319 1 784 1188 33 21 27 chrUextra 26111239 26111426 -2893230 + NTS_DM Other Other 55 240 0 1 784 1866 25 12 21 chrUextra 26111426 26111668 -2892988 + NTS_DM Other Other 1 240 0 1 784 1563 22 0 5 chrUextra 26111668 26111854 -2892802 + NTS_DM Other Other 1 185 -55 1 784 1629 170 10 5 chrUextra 26112670 26113284 -2891372 + SAR_DM Satellite Satellite 1 616 -836 1 784 4337 116 0 0 chrUextra 26113388 26113999 -2890657 - Gypsy_I LTR Gypsy -205 6302 5692 1 784 2842 158 32 22 chrUextra 26114100 26114695 -2889961 - SAR_DM Satellite Satellite -645 827 227 1 784 936 169 17 0 chrUextra 26114814 26114992 -2889664 + SAR_DM Satellite Satellite 623 803 -669 1 784 3725 11 0 9 chrUextra 26114992 26115429 -2889227 - DOC LINE Jockey 0 4725 4293 1 784 1611 174 10 5 chrUextra 26115529 26116143 -2888513 - SAR_DM Satellite Satellite -659 616 1 1 784 1028 92 10 20 chrUextra 26116255 26116839 -2887817 + RSP Satellite Satellite 1 578 0 1 784 5628 5 0 0 chrUextra 26116959 26117574 -2887082 + LSU-rRNA_Dme rRNA rRNA 536 1150 -2750 1 784 3148 14 0 0 chrUextra 26117674 26118020 -2886636 + BATUMI_I LTR Pao 5343 5688 -2275 1 784 2310 40 0 0 chrUextra 26118016 26118289 -2886367 - BATUMI_I LTR Pao -3024 4939 4667 1 784 2323 70 3 78 chrUextra 26118389 26118993 -2885663 - DMSAT6 Satellite Satellite -116 558 1 1 784 5423 11 2 0 chrUextra 26119104 26119719 -2884937 + Invader2_I LTR Gypsy 3551 4166 -426 1 784 240 172 46 15 chrUextra 26119822 26119887 -2884769 - HMSBEAGLE_I LTR Gypsy -6308 221 155 1 784 240 172 46 15 chrUextra 26120096 26120161 -2884495 - HMSBEAGLE_I LTR Gypsy -6308 221 155 1 784 266 128 0 21 chrUextra 26120370 26120418 -2884238 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 784 3012 179 23 3 chrUextra 26121252 26121864 -2882792 + SAR_DM Satellite Satellite 246 869 -603 1 784 5246 29 5 0 chrUextra 26121964 26122579 -2882077 + R1_DM LINE R1 2482 3099 -2257 1 784 274 50 24 24 chrUextra 26122679 26122720 -2881936 + ARS406_DM Unknown Unknown 149 189 -164 1 784 3028 176 5 5 chrUextra 26122687 26123276 -2881380 - SAR_DM Satellite Satellite -625 847 259 1 784 3042 275 41 53 chrUextra 26123394 26124342 -2880314 + SAR_DM Satellite Satellite 260 1196 -276 1 784 463 82 0 0 chrUextra 26124362 26124423 -2880233 + FB4_DM DNA Tc1 2 62 -4027 1 784 1456 128 112 31 chrUextra 26124402 26124724 -2879932 - FB4_DM DNA Tc1 -3357 732 385 1 784 2672 89 11 31 chrUextra 26124824 26125439 -2879217 - DMSAT6 Satellite Satellite -80 603 1 1 784 3359 40 8 0 chrUextra 26125539 26125938 -2878718 - R1_DM LINE R1 -3638 1718 1317 1 784 1925 23 0 0 chrUextra 26125936 26126154 -2878502 - R1_DM LINE R1 -3528 1828 1611 1 784 3085 171 10 10 chrUextra 26126254 26126869 -2877787 - SAR_DM Satellite Satellite -515 957 343 1 784 3389 129 10 13 chrUextra 26126969 26127580 -2877076 + SAR_DM Satellite Satellite 287 895 -577 1 784 2543 88 7 65 chrUextra 26127707 26128297 -2876359 - DMSAT6 Satellite Satellite 0 555 1 1 784 5587 3 0 0 chrUextra 26128399 26129014 -2875642 + R1_DM LINE R1 2383 2997 -2359 1 784 5436 11 0 0 chrUextra 26129115 26129729 -2874927 - STALKER4_I LTR Gypsy -466 6064 5451 1 784 2866 189 10 7 chrUextra 26129829 26130441 -2874215 + SAR_DM Satellite Satellite 278 891 -581 1 784 2050 5 0 0 chrUextra 26130854 26131078 -2873578 + DIVER_LTR LTR Pao 1 224 0 1 784 530 0 17 0 chrUextra 26131099 26131159 -2873497 + DIVER_I LTR Pao 1 61 -5582 1 784 5482 11 2 0 chrUextra 26131259 26131874 -2872782 + R1_DM LINE R1 1594 2209 -3147 1 784 269 133 0 0 chrUextra 26131974 26132019 -2872637 - ARS406_DM Unknown Unknown -308 45 1 1 784 2970 173 10 10 chrUextra 26131979 26132581 -2872075 + SAR_DM Satellite Satellite 246 847 -625 1 784 256 100 25 0 chrUextra 26132549 26132589 -2872067 - ARS406_DM Unknown Unknown -164 189 149 1 784 2704 186 13 19 chrUextra 26132689 26133304 -2871352 + SAR_DM Satellite Satellite 394 1004 -468 1 784 5446 13 0 2 chrUextra 26133404 26134019 -2870637 - G2_DM LINE Jockey -760 2342 1729 1 784 2258 59 0 34 chrUextra 26134205 26134502 -2870154 - Gypsy4_LTR LTR Gypsy 0 287 1 1 784 2082 9 0 4 chrUextra 26134502 26134734 -2869922 - Gypsy4_I LTR Gypsy 0 6288 6058 1 784 268 196 0 19 chrUextra 26134942 26134994 -2869662 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 268 196 0 19 chrUextra 26135034 26135086 -2869570 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 268 196 0 19 chrUextra 26135126 26135178 -2869478 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 278 176 0 19 chrUextra 26135209 26135261 -2869395 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 22 56 0 0 chrUextra 26135274 26135310 -2869346 + AT_rich Low_complexity Low_complexity 1 36 0 1 784 915 18 0 27 chrUextra 26135337 26135449 -2869207 + NTS_DM Other Other 25 133 -107 1 784 1554 149 57 158 chrUextra 26136264 26136878 -2867778 + BATUMI_I LTR Pao 482 1033 -6930 1 784 1386 0 0 0 chrUextra 26137694 26137848 -2866808 + (GAGAA)n Simple_repeat Simple_repeat 2 155 0 1 784 414 189 0 0 chrUextra 26138412 26138518 -2866138 + (AATAG)n Simple_repeat Simple_repeat 4 109 0 1 784 5567 5 0 0 chrUextra 26139124 26139739 -2864917 + R1_DM LINE R1 1621 2235 -3121 1 784 1678 239 25 33 chrUextra 26139848 26139938 -2864718 - SAR_DM Satellite Satellite -667 805 587 1 784 2342 117 3 6 chrUextra 26139938 26140300 -2864356 + XDMR Unknown Unknown 1 361 0 1 784 1678 239 25 33 chrUextra 26140300 26140453 -2864203 - SAR_DM Satellite Satellite -667 586 206 1 784 5607 2 2 3 chrUextra 26140555 26141169 -2863487 + LSU-rRNA_Dme rRNA rRNA 807 1419 -2481 1 784 3963 14 30 8 chrUextra 26142711 26143212 -2861444 + DM176_I LTR Gypsy 1 512 -5908 1 784 65 25 0 0 chrUextra 26143222 26143301 -2861355 + AT_rich Low_complexity Low_complexity 1 79 0 1 784 694 11 41 31 chrUextra 26144129 26144227 -2860429 + NTS_DM Other Other 142 240 0 1 784 1995 4 17 13 chrUextra 26144227 26144466 -2860190 + NTS_DM Other Other 1 240 0 1 784 2006 0 17 13 chrUextra 26144466 26144705 -2859951 + NTS_DM Other Other 1 240 0 1 784 330 0 0 0 chrUextra 26144708 26144744 -2859912 + NTS_DM Other Other 5 40 -200 1 784 2488 87 43 27 chrUextra 26144855 26145459 -2859197 - DMSAT6 Satellite Satellite 0 614 1 1 784 1620 0 0 0 chrUextra 26145990 26146170 -2858486 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 784 2607 93 34 7 chrUextra 26146274 26146889 -2857767 - DMSAT6 Satellite Satellite -64 631 1 1 784 5703 2 0 2 chrUextra 26146989 26147604 -2857052 + SSU-rRNA_Dme rRNA rRNA 515 1128 -867 1 784 1848 0 0 0 chrUextra 26148419 26148628 -2856028 - NOMAD_LTR LTR Gypsy -309 209 1 1 784 1605 21 0 5 chrUextra 26149134 26149325 -2855331 - NTS_DM Other Other -50 190 1 1 784 1878 21 17 17 chrUextra 26149325 26149565 -2855091 - NTS_DM Other Other 0 240 1 1 784 1279 33 22 22 chrUextra 26149565 26149749 -2854907 - NTS_DM Other Other 0 240 57 1 784 5257 23 0 2 chrUextra 26149849 26150463 -2854193 - R1_DM LINE R1 -2206 3150 2538 1 784 3125 169 18 7 chrUextra 26150564 26151179 -2853477 - SAR_DM Satellite Satellite -518 954 333 1 784 943 18 0 17 chrUextra 26151994 26152109 -2852547 - DOC2_DM LINE Jockey -4674 119 7 1 784 2619 160 10 4 chrUextra 26152118 26152609 -2852047 + SAR_DM Satellite Satellite 380 873 -599 1 784 4559 18 0 0 chrUextra 26152709 26153220 -2851436 + ACCORD2_I LTR Gypsy 2358 2868 -4344 1 784 966 9 0 0 chrUextra 26153212 26153324 -2851332 + ACCORD2_I LTR Gypsy 5527 5638 -1574 1 784 3117 176 8 5 chrUextra 26153425 26154036 -2850620 + SAR_DM Satellite Satellite 267 879 -593 1 784 26 30 0 0 chrUextra 26154186 26154219 -2850437 + AT_rich Low_complexity Low_complexity 1 33 0 1 784 21 89 0 0 chrUextra 26154338 26154394 -2850262 + AT_rich Low_complexity Low_complexity 1 56 0 1 784 2489 191 19 14 chrUextra 26154852 26155440 -2849216 - SAR_DM Satellite Satellite -684 788 198 1 784 545 127 53 26 chrUextra 26155353 26155466 -2849190 + ARS406_DM Unknown Unknown 1 116 -237 1 784 1557 20 19 19 chrUextra 26155566 26155771 -2848885 + NTS_DM Other Other 36 240 0 1 784 1823 17 21 33 chrUextra 26155771 26156014 -2848642 + NTS_DM Other Other 1 240 0 1 784 1338 24 0 12 chrUextra 26156014 26156180 -2848476 + NTS_DM Other Other 1 164 -76 1 784 5150 31 0 0 chrUextra 26156280 26156886 -2847770 + R1_DM LINE R1 2531 3136 -2220 1 784 2707 194 8 10 chrUextra 26156994 26157604 -2847052 + SAR_DM Satellite Satellite 250 858 -614 1 784 2983 181 7 7 chrUextra 26157708 26158320 -2846336 - SAR_DM Satellite Satellite -515 957 346 1 784 2631 186 7 25 chrUextra 26158426 26159033 -2845623 + SAR_DM Satellite Satellite 523 1118 -354 1 784 2361 118 17 28 chrUextra 26159136 26159719 -2844937 - DMSAT6 Satellite Satellite -85 576 1 1 784 1620 4 0 0 chrUextra 26159850 26160317 -2844339 + (GAGAA)n Simple_repeat Simple_repeat 1 467 0 1 784 2750 3 0 3 chrUextra 26160564 26160865 -2843791 + STALKER4_LTR LTR Gypsy 103 402 0 1 784 284 93 47 0 chrUextra 26160881 26160924 -2843732 - PROTOP_B DNA P -1108 45 1 1 784 694 12 11 35 chrUextra 26161278 26161365 -2843291 - NTS_DM Other Other -131 109 25 1 784 1350 18 0 6 chrUextra 26161417 26161582 -2843074 - NTS_DM Other Other -39 201 38 1 784 936 9 0 27 chrUextra 26161582 26161694 -2842962 - NTS_DM Other Other -107 133 25 1 784 1112 28 0 7 chrUextra 26161746 26161892 -2842764 - NTS_DM Other Other -39 201 57 1 784 2936 178 12 5 chrUextra 26161996 26162599 -2842057 - SAR_DM Satellite Satellite -620 852 246 1 784 282 128 0 0 chrUextra 26162559 26162606 -2842050 + ARS406_DM Unknown Unknown 1 47 -306 1 784 2576 95 20 21 chrUextra 26162707 26163320 -2841336 - DMSAT6 Satellite Satellite -86 612 1 1 784 4574 60 68 2 chrUextra 26163421 26164034 -2840622 - R1_DM LINE R1 -4573 783 130 1 784 2819 181 13 13 chrUextra 26164135 26164744 -2839912 + SAR_DM Satellite Satellite 293 901 -571 1 784 979 65 5 18 chrUextra 26164848 26165462 -2839194 - RSP Satellite Satellite -83 606 1 1 784 2210 123 15 20 chrUextra 26165562 26166176 -2838480 + DMSAT6 Satellite Satellite 1 610 -108 1 784 1542 177 9 3 chrUextra 26166287 26166610 -2838046 - ROVER-I_DM LTR Gypsy -270 6314 5990 1 784 1479 155 0 0 chrUextra 26166645 26166890 -2837766 - ROVER-I_DM LTR Gypsy -1276 5308 5064 1 784 667 101 0 0 chrUextra 26166990 26167099 -2837557 - ARS406_DM Unknown Unknown -241 112 4 1 784 2341 179 64 26 chrUextra 26166994 26167604 -2837052 + SAR_DM Satellite Satellite 1 633 -203 1 784 2298 99 15 66 chrUextra 26167704 26168308 -2836348 + DMSAT6 Satellite Satellite 1 573 -74 1 784 2515 126 134 53 chrUextra 26168424 26169028 -2835628 + TART LINE telomeric 9624 10276 -4201 1 784 2861 162 11 8 chrUextra 26169135 26169746 -2834910 + SAR_DM Satellite Satellite 246 858 -614 1 784 639 0 0 0 chrUextra 26169846 26169917 -2834739 + (TTCTC)n Simple_repeat Simple_repeat 2 72 0 1 784 2622 201 16 19 chrUextra 26170560 26171174 -2833482 - SAR_DM Satellite Satellite -549 611 1 1 784 442 99 0 0 chrUextra 26171274 26171345 -2833311 - ARS406_DM Unknown Unknown -282 71 1 1 784 2296 174 32 11 chrUextra 26171283 26171888 -2832768 + SAR_DM Satellite Satellite 1 617 -677 1 784 5081 21 0 0 chrUextra 26171988 26172602 -2832054 - R1_DM LINE R1 -2839 2517 1904 1 784 2926 277 27 29 chrUextra 26172704 26174030 -2830626 - SAR_DM Satellite Satellite -449 1323 1 1 784 1575 194 45 6 chrUextra 26174132 26174744 -2829912 + SAR_DM Satellite Satellite 1 635 -869 1 784 2675 198 23 2 chrUextra 26174851 26175458 -2829198 - DM412 LTR Gypsy -404 6493 5874 1 784 5032 0 0 2 chrUextra 26175558 26176153 -2828503 - LSU-rRNA_Dme rRNA rRNA -3089 811 218 1 784 4808 39 0 5 chrUextra 26176272 26176886 -2827770 + R1_DM LINE R1 1376 1986 -3370 1 784 4626 47 2 2 chrUextra 26177006 26177600 -2827056 - R1_DM LINE R1 -3667 1689 1096 1 784 2804 134 19 42 chrUextra 26177700 26178314 -2826342 - SAR_DM Satellite Satellite -500 972 373 1 784 4428 15 72 2 chrUextra 26178433 26179028 -2825628 - R1_DM LINE R1 -1368 3988 3352 1 784 2124 74 0 55 chrUextra 26179179 26179740 -2824916 + DMSAT6 Satellite Satellite 1 529 -3 1 784 4346 88 0 0 chrUextra 26179842 26180454 -2824202 - STALKER4_I LTR Gypsy -4224 2306 1695 1 784 5116 2 0 3 chrUextra 26181270 26181884 -2822772 - ROO_I LTR Pao -3997 4259 3648 1 784 4990 21 2 2 chrUextra 26181984 26182598 -2822058 + R1_DM LINE R1 3641 4254 -1102 1 784 2485 3 0 77 chrUextra 26182698 26183034 -2821622 - LSU-rRNA_Dme rRNA rRNA -3590 310 1 1 784 21 95 0 0 chrUextra 26183046 26183109 -2821547 + AT_rich Low_complexity Low_complexity 1 63 0 1 784 4929 39 2 0 chrUextra 26183412 26184026 -2820630 - R1_DM LINE R1 -1944 3412 2798 1 784 5364 0 2 0 chrUextra 26184126 26184740 -2819916 + SSU-rRNA_Dme rRNA rRNA 416 1030 -965 1 784 1687 5 0 0 chrUextra 26184840 26185044 -2819612 - NTS_DM Other Other -36 204 1 1 784 1850 4 17 13 chrUextra 26185044 26185283 -2819373 - NTS_DM Other Other 0 240 1 1 784 1203 6 23 18 chrUextra 26185283 26185454 -2819202 - NTS_DM Other Other 0 240 69 1 784 414 0 0 0 chrUextra 26185554 26185600 -2819056 + (TTCTC)n Simple_repeat Simple_repeat 3 48 0 1 784 1578 8 0 0 chrUextra 26185608 26185845 -2818811 + (GAGAA)n Simple_repeat Simple_repeat 1 237 0 1 784 279 79 0 0 chrUextra 26185845 26185883 -2818773 + (GGAGA)n Simple_repeat Simple_repeat 4 41 0 1 784 1524 22 0 0 chrUextra 26185885 26186065 -2818591 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 784 696 68 0 0 chrUextra 26186065 26186168 -2818488 + (CAGAA)n Simple_repeat Simple_repeat 1 103 0 1 784 1915 222 28 33 chrUextra 26186277 26186882 -2817774 - TAHRE LINE telomeric -473 9990 9389 1 784 482 0 0 0 chrUextra 26186982 26187038 -2817618 - ROO_LTR LTR Pao -372 56 1 1 784 3098 169 2 2 chrUextra 26187038 26187596 -2817060 + Gypsy3_I LTR Gypsy 4940 5497 -680 1 784 255 125 0 0 chrUextra 26187743 26187783 -2816873 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 784 22 56 0 0 chrUextra 26187796 26187832 -2816824 + AT_rich Low_complexity Low_complexity 1 36 0 1 784 455 17 0 49 chrUextra 26187858 26187919 -2816737 + NTS_DM Other Other 25 82 -158 1 784 2297 0 0 0 chrUextra 26187919 26188195 -2816461 + Copia_LTR LTR Copia 1 276 0 1 784 927 0 0 9 chrUextra 26188195 26188310 -2816346 + Copia_I LTR Copia 1 114 -4479 1 784 2761 159 10 18 chrUextra 26188411 26189024 -2815632 + SAR_DM Satellite Satellite 267 874 -598 1 784 5173 8 2 2 chrUextra 26189838 26190452 -2814204 - R1_DM LINE R1 -330 5026 4413 1 784 1288 295 11 11 chrUextra 26190578 26191147 -2813509 - MICROPIA_I LTR Gypsy -2183 1916 1336 1 784 44 0 0 0 chrUextra 26191836 26191880 -2812776 + AT_rich Low_complexity Low_complexity 1 44 0 1 784 5362 2 2 0 chrUextra 26191980 26192594 -2812062 + LSU-rRNA_Dme rRNA rRNA 3038 3652 -248 1 784 5227 0 0 0 chrUextra 26192694 26193308 -2811348 - ROO_I LTR Pao -1849 6407 5794 1 784 4939 12 2 15 chrUextra 26193408 26194022 -2810634 - R1_DM LINE R1 -4557 799 194 1 784 1616 55 9 0 chrUextra 26194126 26194346 -2810310 - R1_DM LINE R1 -5134 222 1 1 784 2240 19 151 0 chrUextra 26194379 26194736 -2809920 - R1_DM LINE R1 0 5356 4946 1 784 22 35 0 0 chrUextra 26194836 26194865 -2809791 + AT_rich Low_complexity Low_complexity 1 29 0 1 784 58 15 0 0 chrUextra 26195342 26195407 -2809249 + AT_rich Low_complexity Low_complexity 1 65 0 1 784 2487 202 3 5 chrUextra 26195550 26196156 -2808500 + SAR_DM Satellite Satellite 472 1076 -396 1 784 818 10 0 10 chrUextra 26196264 26196364 -2808292 + (GAGAA)n Simple_repeat Simple_repeat 4 102 0 1 784 198 91 0 0 chrUextra 26196366 26196399 -2808257 + (ATAAG)n Simple_repeat Simple_repeat 1 33 0 1 784 1553 0 0 6 chrUextra 26196399 26196576 -2808080 + (GAGAA)n Simple_repeat Simple_repeat 1 177 0 1 784 3056 95 56 66 chrUextra 26196981 26197589 -2807067 + Gypsy9_I LTR Gypsy 151 752 -3925 1 784 5248 0 3 3 chrUextra 26197692 26198305 -2806351 + SSU-rRNA_Dme rRNA rRNA 1040 1652 -343 1 784 534 120 50 0 chrUextra 26198405 26198505 -2806151 - ARS406_DM Unknown Unknown -248 105 1 1 784 2245 197 22 12 chrUextra 26198417 26199017 -2805639 + SAR_DM Satellite Satellite 195 800 -672 1 784 2380 81 21 13 chrUextra 26199118 26199731 -2804925 + DMSAT6 Satellite Satellite 1 618 -64 1 784 720 11 0 0 chrUextra 26199831 26199919 -2804737 + NTS_DM Other Other 46 133 -107 1 784 1252 18 0 6 chrUextra 26199919 26200084 -2804572 + NTS_DM Other Other 38 201 -39 1 784 870 9 0 27 chrUextra 26200136 26200248 -2804408 + NTS_DM Other Other 25 133 -107 1 784 1187 30 0 12 chrUextra 26200248 26200414 -2804242 + NTS_DM Other Other 38 201 -39 1 784 31 58 0 0 chrUextra 26200573 26200625 -2804031 + AT_rich Low_complexity Low_complexity 1 52 0 1 784 3098 55 4 14 chrUextra 26200713 26201151 -2803505 - STALKER4_LTR LTR Gypsy -3 399 1 1 784 774 11 0 0 chrUextra 26201257 26201347 -2803309 - NTS_DM Other Other -150 90 1 1 784 1301 21 21 21 chrUextra 26201380 26201572 -2803084 - NTS_DM Other Other -11 229 38 1 784 870 9 0 27 chrUextra 26201572 26201684 -2802972 - NTS_DM Other Other -107 133 25 1 784 239 54 0 26 chrUextra 26201741 26201779 -2802877 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 784 738 22 0 0 chrUextra 26201779 26201870 -2802786 - NTS_DM Other Other -122 118 28 1 784 255 125 0 0 chrUextra 26202766 26202806 -2801850 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 784 22 56 0 0 chrUextra 26202819 26202855 -2801801 + AT_rich Low_complexity Low_complexity 1 36 0 1 784 870 9 0 27 chrUextra 26202881 26202993 -2801663 + NTS_DM Other Other 25 133 -107 1 784 1252 18 0 6 chrUextra 26202993 26203158 -2801498 + NTS_DM Other Other 38 201 -39 1 784 666 12 0 35 chrUextra 26203210 26203296 -2801360 + NTS_DM Other Other 25 107 -133 1 784 1265 33 0 6 chrUextra 26204109 26204291 -2800365 + FW_DM LINE Jockey 4512 4692 0 1 784 254 29 0 0 chrUextra 26204296 26204330 -2800326 - R1_DM LINE R1 -3966 1390 1357 1 784 2960 31 54 3 chrUextra 26204330 26204722 -2799934 - R1_DM LINE R1 -4150 1206 795 1 784 2022 144 63 22 chrUextra 26204851 26205431 -2799225 - STALKER4_I LTR Gypsy -5531 999 348 1 784 2281 98 2 31 chrUextra 26205535 26206145 -2798511 + DMSAT6 Satellite Satellite 1 591 -3 1 784 1980 183 7 9 chrUextra 26206248 26206690 -2797966 - SAR_DM Satellite Satellite -536 936 496 1 784 657 53 53 0 chrUextra 26206695 26206790 -2797866 + ARS406_DM Unknown Unknown 90 189 -164 1 784 766 136 39 13 chrUextra 26206705 26206861 -2797795 - SAR_DM Satellite Satellite -569 903 744 1 784 302 87 0 0 chrUextra 26206961 26207007 -2797649 - ARS406_DM Unknown Unknown -307 46 1 1 784 2640 177 15 8 chrUextra 26206967 26207570 -2797086 + SAR_DM Satellite Satellite 246 852 -620 1 784 1620 0 0 0 chrUextra 26207676 26208036 -2796620 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 784 2326 0 4 0 chrUextra 26209100 26209372 -2795284 - R1_DM LINE R1 -253 5103 4831 1 784 2995 0 0 3 chrUextra 26209368 26209713 -2794943 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2311 1 784 5274 3 0 0 chrUextra 26209813 26210426 -2794230 - R1_DM LINE R1 -1655 3701 3089 1 784 3159 35 25 3 chrUextra 26210526 26211135 -2793521 + PROTOP DNA P 134 827 -3653 1 784 2828 146 10 36 chrUextra 26211241 26211852 -2792804 + SAR_DM Satellite Satellite 462 1056 -416 1 784 5136 13 2 0 chrUextra 26211954 26212565 -2792091 + DMRT1B LINE R1 1868 2479 -2704 1 784 5332 0 0 2 chrUextra 26212665 26213278 -2791378 + SSU-rRNA_Dme rRNA rRNA 556 1167 -828 1 784 474 153 24 0 chrUextra 26214173 26214258 -2790398 - NTS_DM Other Other -150 90 4 1 12 1301 6 0 18 chrUextra 26214368 26214533 -2790123 - NTS_DM Other Other -78 162 1 1 785 1203 6 23 18 chrUextra 26214533 26214704 -2789952 - NTS_DM Other Other 0 240 69 1 785 2641 172 10 11 chrUextra 26214805 26215416 -2789240 + SAR_DM Satellite Satellite 244 853 -619 1 785 2738 231 5 3 chrUextra 26215517 26216130 -2788526 - Gypsy_I LTR Gypsy -5346 1161 548 1 785 1599 6 0 0 chrUextra 26216243 26216423 -2788233 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 785 1447 18 0 33 chrUextra 26216437 26216842 -2787814 + (TAGA)n Simple_repeat Simple_repeat 1 391 0 1 785 611 0 0 0 chrUextra 26216943 26217015 -2787641 + DM176_LTR LTR Gypsy 436 507 0 1 785 4283 8 0 0 chrUextra 26217026 26217533 -2787123 + DM176_LTR LTR Gypsy 1 507 0 1 785 2610 184 13 13 chrUextra 26217656 26218266 -2786390 + SAR_DM Satellite Satellite 438 1047 -425 1 785 1937 181 11 5 chrUextra 26219082 26219690 -2784966 - SAR_DM Satellite Satellite -716 611 1 1 785 5075 7 10 0 chrUextra 26219795 26220408 -2784248 - DMRT1B LINE R1 -3612 1571 953 1 785 5103 0 2 2 chrUextra 26220512 26221121 -2783535 - LSU-rRNA_Dme rRNA rRNA -2826 1074 466 1 785 2775 173 8 10 chrUextra 26221221 26221834 -2782822 + SAR_DM Satellite Satellite 403 1014 -458 1 785 1626 43 0 0 chrUextra 26221936 26222144 -2782512 + DM1731_LTR LTR Copia 128 335 -1 1 785 1620 8 0 0 chrUextra 26222144 26222547 -2782109 + (TTATA)n Simple_repeat Simple_repeat 1 403 0 1 785 2983 107 64 35 chrUextra 26222647 26223260 -2781396 - STALKER4_I LTR Gypsy -5342 1188 430 1 785 523 33 0 0 chrUextra 26224503 26224564 -2780092 + DNAREP1_DM LINE Penelope 2 62 -532 1 785 5491 2 0 2 chrUextra 26224786 26225380 -2779276 - LSU-rRNA_Dme rRNA rRNA -1520 2380 1788 1 785 2991 169 10 8 chrUextra 26225499 26226101 -2778555 - SAR_DM Satellite Satellite -549 923 321 1 785 951 81 3 18 chrUextra 26226212 26226825 -2777831 + RSP Satellite Satellite 1 604 0 1 785 981 283 54 47 chrUextra 26226925 26227538 -2777118 - SAR_DM Satellite Satellite -485 987 371 1 785 23 0 0 0 chrUextra 26228437 26228460 -2776196 + AT_rich Low_complexity Low_complexity 1 23 0 1 785 5298 13 2 3 chrUextra 26229064 26229677 -2774979 - ROO_I LTR Pao -4394 3862 3251 1 785 5279 11 29 0 chrUextra 26229777 26230390 -2774266 - STALKER4_I LTR Gypsy -3275 3255 2625 1 785 4954 38 0 2 chrUextra 26230490 26231103 -2773553 - Gypsy2_I LTR Gypsy -1694 5318 4097 1 785 246 62 0 0 chrUextra 26231203 26231235 -2773421 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 1 785 5593 3 2 3 chrUextra 26231916 26232529 -2772127 + LSU-rRNA_Dme rRNA rRNA 861 1472 -2428 1 785 3083 171 11 8 chrUextra 26232629 26233242 -2771414 + SAR_DM Satellite Satellite 411 1025 -447 1 785 1223 0 0 0 chrUextra 26233342 26233472 -2771184 - LSU-rRNA_Dme rRNA rRNA -1983 1917 1788 1 785 3886 5 5 7 chrUextra 26233513 26233955 -2770701 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1351 1 785 3114 172 8 7 chrUextra 26234055 26234668 -2769988 + SAR_DM Satellite Satellite 256 869 -603 1 785 5443 7 11 3 chrUextra 26234768 26235381 -2769275 - Copia2_I LTR Copia -2849 1313 696 1 785 3081 174 8 8 chrUextra 26235482 26236089 -2768567 + SAR_DM Satellite Satellite 352 958 -514 1 785 774 91 0 0 chrUextra 26236194 26236315 -2768341 + (TAA)n Simple_repeat Simple_repeat 1 121 0 1 785 186 0 98 39 chrUextra 26236344 26236395 -2768261 + (TATAA)n Simple_repeat Simple_repeat 2 55 0 1 785 24 67 0 0 chrUextra 26236400 26236445 -2768211 + AT_rich Low_complexity Low_complexity 1 45 0 1 785 1239 82 0 0 chrUextra 26236499 26236796 -2767860 + (TAA)n Simple_repeat Simple_repeat 1 297 0 1 785 5301 31 3 0 chrUextra 26236907 26237520 -2767136 + IDEFIX_I LTR Gypsy 1314 1928 -3700 1 785 2814 64 13 26 chrUextra 26237620 26238232 -2766424 + DMSAT6 Satellite Satellite 1 604 -48 1 785 5558 5 0 0 chrUextra 26238333 26238946 -2765710 + DOC LINE Jockey 1272 1884 -2841 1 785 1760 183 19 5 chrUextra 26239046 26239659 -2764997 + SAR_DM Satellite Satellite 1 621 -558 1 785 2360 102 15 65 chrUextra 26239785 26240372 -2764284 + DMSAT6 Satellite Satellite 1 557 0 1 785 2457 104 48 20 chrUextra 26240472 26241083 -2763573 - DMSAT6 Satellite Satellite -43 628 1 1 785 3081 172 7 8 chrUextra 26241187 26241798 -2762858 - SAR_DM Satellite Satellite -435 1037 428 1 785 1871 0 18 18 chrUextra 26241898 26242127 -2762529 + NTS_DM Other Other 12 240 0 1 785 1992 4 17 13 chrUextra 26242127 26242366 -2762290 + NTS_DM Other Other 1 240 0 1 785 1303 7 0 0 chrUextra 26242366 26242511 -2762145 + NTS_DM Other Other 1 145 -95 1 785 5676 3 0 0 chrUextra 26242611 26243224 -2761432 - FW_DM LINE Jockey -749 3943 3331 1 785 724 157 148 14 chrUextra 26243330 26243472 -2761184 - DMLTR5 LTR Gypsy -62 204 44 1 785 323 274 120 64 chrUextra 26243679 26243929 -2760727 + Invader1_LTR LTR Gypsy 84 347 -76 1 785 990 0 0 0 chrUextra 26244037 26244147 -2760509 + (GAGAA)n Simple_repeat Simple_repeat 2 111 0 1 785 5592 0 2 5 chrUextra 26244750 26245363 -2759293 - SSU-rRNA_Dme rRNA rRNA -601 1394 784 1 785 1117 176 24 10 chrUextra 26245463 26246073 -2758583 + SAR_DM Satellite Satellite 1 618 -680 1 785 3584 5 7 10 chrUextra 26246266 26246681 -2757975 + DM297_LTR LTR Gypsy 1 414 0 1 785 919 19 9 0 chrUextra 26246681 26246789 -2757867 + DM297_I LTR Gypsy 1 109 -6058 1 785 5455 2 8 3 chrUextra 26246892 26247502 -2757154 + LSU-rRNA_Dme rRNA rRNA 1096 1708 -2192 1 785 1728 175 25 8 chrUextra 26247604 26248215 -2756441 + SAR_DM Satellite Satellite 1 621 -569 1 785 2605 164 8 29 chrUextra 26249037 26250335 -2754321 + DMSAT6 Satellite Satellite 1 1270 -3 1 785 530 41 0 14 chrUextra 26250454 26250528 -2754128 + (TTCTC)n Simple_repeat Simple_repeat 2 74 0 1 785 2401 194 11 11 chrUextra 26250528 26251066 -2753590 - SAR_DM Satellite Satellite -689 783 246 1 785 2914 185 8 8 chrUextra 26251167 26251773 -2752883 - SAR_DM Satellite Satellite -468 1004 399 1 785 5635 8 0 0 chrUextra 26251880 26252493 -2752163 + LSU-rRNA_Dme rRNA rRNA 2189 2801 -1099 1 785 2405 108 21 11 chrUextra 26252593 26253205 -2751451 - DMSAT6 Satellite Satellite -1 617 1 1 785 1048 69 7 19 chrUextra 26253336 26253917 -2750739 - RSP Satellite Satellite 0 574 1 1 785 2468 86 10 83 chrUextra 26254036 26254629 -2750027 + DMSAT6 Satellite Satellite 1 549 0 1 785 2405 102 20 36 chrUextra 26254729 26255341 -2749315 - DMSAT6 Satellite Satellite -408 602 1 1 785 5086 33 25 2 chrUextra 26255441 26256053 -2748603 - DMRT1B LINE R1 -2953 2230 1605 1 785 423 100 0 0 chrUextra 26256205 26256275 -2748381 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 785 3132 22 0 0 chrUextra 26256275 26256631 -2748025 + MDG1_LTR LTR Gypsy 87 442 0 1 785 1215 8 0 0 chrUextra 26256631 26256765 -2747891 + MDG1_I LTR Gypsy 1 134 -6462 1 785 5148 26 29 0 chrUextra 26256865 26257477 -2747179 - ROO_I LTR Pao -3787 4469 3840 1 785 2810 181 10 10 chrUextra 26257577 26258170 -2746486 + SAR_DM Satellite Satellite 484 1076 -396 1 785 537 301 58 58 chrUextra 26259001 26259534 -2745122 - BLASTOPIA_I LTR Gypsy -1868 2724 2178 1 785 2677 191 10 8 chrUextra 26259713 26260308 -2744348 - SAR_DM Satellite Satellite -685 787 192 1 785 733 115 0 0 chrUextra 26260212 26260325 -2744331 + ARS406_DM Unknown Unknown 1 113 -240 1 785 4758 30 31 3 chrUextra 26260425 26260998 -2743658 - R1_DM LINE R1 -2497 2859 2271 1 785 378 23 0 0 chrUextra 26260991 26261034 -2743622 + CIRCE LINE Composite 4931 4973 -1383 1 785 239 86 0 0 chrUextra 26261137 26261172 -2743484 + ARS406_DM Unknown Unknown 64 98 -255 1 785 2727 169 7 13 chrUextra 26261192 26261749 -2742907 - SAR_DM Satellite Satellite -396 1076 523 1 785 4070 42 99 0 chrUextra 26261914 26262457 -2742199 + PROTOP DNA P 1 597 -3883 1 785 1091 85 19 7 chrUextra 26262562 26262716 -2741940 + DM297_LTR LTR Gypsy 155 310 -104 1 785 28 0 0 0 chrUextra 26262817 26262845 -2741811 + AT_rich Low_complexity Low_complexity 1 28 0 1 785 975 110 0 0 chrUextra 26262847 26263166 -2741490 + (TTA)n Simple_repeat Simple_repeat 1 319 0 1 785 2730 190 7 20 chrUextra 26263273 26263885 -2740771 + SAR_DM Satellite Satellite 498 1101 -371 1 785 3558 84 137 13 chrUextra 26263985 26264597 -2740059 + Gypsy12_I LTR Gypsy 4580 5267 -279 1 785 5561 2 0 0 chrUextra 26264697 26265309 -2739347 - ROO_I LTR Pao -2854 5402 4791 1 785 5459 0 2 2 chrUextra 26265409 26266021 -2738635 - R1_DM LINE R1 -3950 1406 795 1 785 5719 0 0 2 chrUextra 26266121 26266733 -2737923 + SSU-rRNA_Dme rRNA rRNA 268 878 -1117 1 785 224 185 31 0 chrUextra 26266877 26266942 -2737714 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 785 22 35 0 0 chrUextra 26267229 26267258 -2737398 + AT_rich Low_complexity Low_complexity 1 29 0 1 785 237 246 0 14 chrUextra 26267555 26267629 -2737027 - Transib5 DNA Transib -1538 1463 1391 1 785 207 0 0 0 chrUextra 26267689 26267712 -2736944 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 785 4825 44 18 2 chrUextra 26268257 26268868 -2735788 - R1_DM LINE R1 -4122 1234 614 1 785 3149 270 45 21 chrUextra 26268969 26270285 -2734371 + SAR_DM Satellite Satellite 1 1346 -217 1 785 5496 2 2 5 chrUextra 26270393 26271005 -2733651 + G2_DM LINE Jockey 1181 1790 -1312 1 785 5660 3 0 0 chrUextra 26271105 26271717 -2732939 - FW_DM LINE Jockey -855 3837 3226 1 785 4615 49 23 3 chrUextra 26272529 26273141 -2731515 - R1_DM LINE R1 -4302 1054 431 1 785 1236 7 0 0 chrUextra 26273276 26273411 -2731245 - 5S_DM RNA RNA 0 135 1 1 785 1236 7 0 0 chrUextra 26273649 26273784 -2730872 - 5S_DM RNA RNA 0 135 1 1 785 1149 363 10 10 chrUextra 26275377 26275983 -2728673 + GTWIN_I LTR Gypsy 3495 4100 -2321 1 785 2780 195 5 11 chrUextra 26276094 26276701 -2727955 - SAR_DM Satellite Satellite -668 804 202 1 785 5508 0 2 8 chrUextra 26276801 26277413 -2727243 - SSU-rRNA_Dme rRNA rRNA -54 1941 1334 1 785 5494 5 5 3 chrUextra 26277514 26278125 -2726531 - LSU-rRNA_Dme rRNA rRNA -2240 1660 1049 1 785 5180 20 2 0 chrUextra 26278225 26278837 -2725819 - MAX_I LTR Pao -3627 4287 3675 1 785 2394 183 15 28 chrUextra 26278940 26279548 -2725108 - SAR_DM Satellite Satellite -359 1113 514 1 785 5108 0 2 2 chrUextra 26279649 26280261 -2724395 - R1_DM LINE R1 -4129 1227 616 1 785 1823 179 1 13 chrUextra 26280363 26280776 -2723880 - STALKER4_I LTR Gypsy -6705 697 235 1 785 25 0 0 0 chrUextra 26280800 26280825 -2723831 + AT_rich Low_complexity Low_complexity 1 25 0 1 785 244 128 0 21 chrUextra 26281514 26281562 -2723094 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 785 351 49 65 16 chrUextra 26281583 26281645 -2723011 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 785 2792 168 7 8 chrUextra 26281804 26282397 -2722259 - SAR_DM Satellite Satellite -447 1025 434 1 785 2841 173 7 5 chrUextra 26282500 26283109 -2721547 - SAR_DM Satellite Satellite -581 891 282 1 785 748 0 11 0 chrUextra 26283921 26284010 -2720646 - Invader4_LTR LTR Gypsy -256 90 1 1 785 2905 16 24 3 chrUextra 26284010 26284274 -2720382 - Invader4_I LTR Gypsy 0 2413 2150 1 785 180 0 0 0 chrUextra 26284274 26284294 -2720362 + (C)n Simple_repeat Simple_repeat 1 20 0 1 785 2905 4 4 0 chrUextra 26284294 26284531 -2720125 - Invader4_I LTR Gypsy -264 2149 1777 1 785 4727 3 5 3 chrUextra 26284633 26285242 -2719414 + TABOR_I LTR Gypsy 5534 6143 -193 1 785 2378 97 15 25 chrUextra 26285345 26285940 -2718716 + DMSAT6 Satellite Satellite 1 588 -51 1 785 2413 78 22 44 chrUextra 26286079 26286667 -2717989 + DMSAT6 Satellite Satellite 1 575 -3 1 785 2547 174 12 10 chrUextra 26286789 26287381 -2717275 + SAR_DM Satellite Satellite 326 918 -554 1 785 1345 21 20 25 chrUextra 26287481 26287679 -2716977 - NTS_DM Other Other -6 234 38 1 785 817 0 0 0 chrUextra 26287679 26287775 -2716881 - NTS_DM Other Other -107 133 38 1 785 832 9 9 27 chrUextra 26287775 26287886 -2716770 - NTS_DM Other Other -107 133 25 1 785 21 57 0 0 chrUextra 26287912 26287947 -2716709 + AT_rich Low_complexity Low_complexity 1 35 0 1 785 1042 21 0 7 chrUextra 26287947 26288093 -2716563 - NTS_DM Other Other -39 201 57 1 785 5096 0 10 2 chrUextra 26288193 26288805 -2715851 - ROO_I LTR Pao -4638 3618 3002 1 785 976 0 0 0 chrUextra 26288905 26289018 -2715638 - HMSBEAGLE_I LTR Gypsy -5448 1081 969 1 785 953 35 52 12 chrUextra 26289018 26289190 -2715466 + (TAA)n Simple_repeat Simple_repeat 1 179 0 1 785 2504 0 0 3 chrUextra 26289190 26289516 -2715140 - HMSBEAGLE_I LTR Gypsy -5733 796 472 1 785 4792 23 0 0 chrUextra 26289617 26290229 -2714427 - QUASIMODO_I LTR Gypsy -1159 4901 4290 1 785 2737 162 13 18 chrUextra 26290330 26290940 -2713716 + SAR_DM Satellite Satellite 400 1006 -466 1 785 21 36 0 0 chrUextra 26291625 26291653 -2713003 + AT_rich Low_complexity Low_complexity 1 28 0 1 785 2621 173 21 13 chrUextra 26291756 26292365 -2712291 + SAR_DM Satellite Satellite 246 859 -613 1 785 1251 188 46 6 chrUextra 26292469 26293077 -2711579 - SAR_DM Satellite Satellite -824 632 1 1 785 2339 90 23 35 chrUextra 26293185 26293789 -2710867 + DMSAT6 Satellite Satellite 1 596 -13 1 785 825 11 0 0 chrUextra 26295119 26295213 -2709443 + (TTCTC)n Simple_repeat Simple_repeat 2 95 0 1 785 3279 0 0 0 chrUextra 26295313 26295692 -2708964 - R1_DM LINE R1 -57 5299 4921 1 785 1987 4 0 0 chrUextra 26295695 26295925 -2708731 - R1_DM LINE R1 0 5356 5127 1 785 2707 156 21 18 chrUextra 26296025 26296637 -2708019 - SAR_DM Satellite Satellite -485 987 374 1 785 4999 23 2 3 chrUextra 26296737 26297349 -2707307 - Gypsy6_I LTR Gypsy -4990 2022 1412 1 785 517 119 154 70 chrUextra 26297449 26297635 -2707021 + DM176_LTR LTR Gypsy 230 480 -27 1 785 3229 29 0 19 chrUextra 26297635 26298061 -2706595 + DM176_I LTR Gypsy 1 418 -6002 1 785 789 63 0 0 chrUextra 26298165 26298276 -2706380 + ARS406_DM Unknown Unknown 79 189 -164 1 785 2801 278 91 23 chrUextra 26298179 26299482 -2705174 - SAR_DM Satellite Satellite -208 1391 1 1 785 4436 37 16 16 chrUextra 26299584 26300195 -2704461 + R1_DM LINE R1 547 1157 -4199 1 785 5149 13 2 0 chrUextra 26300295 26300906 -2703750 - STALKER4_I LTR Gypsy -2236 4294 3683 1 785 2888 167 7 7 chrUextra 26301008 26301616 -2703040 + SAR_DM Satellite Satellite 251 858 -614 1 785 5080 15 0 0 chrUextra 26301717 26302328 -2702328 - G2_DM LINE Jockey -251 2851 2241 1 785 976 92 10 19 chrUextra 26302436 26303019 -2701637 + RSP Satellite Satellite 1 578 0 1 785 4953 20 3 2 chrUextra 26303139 26303750 -2700906 - R1_DM LINE R1 -1500 3856 3245 1 785 2716 163 10 10 chrUextra 26303856 26304444 -2700212 - SAR_DM Satellite Satellite -514 958 371 1 785 231 81 27 0 chrUextra 26304561 26304598 -2700058 + ARS406_DM Unknown Unknown 152 189 -164 1 785 2802 169 8 7 chrUextra 26304566 26305167 -2699489 - SAR_DM Satellite Satellite -625 847 246 1 785 225 156 0 0 chrUextra 26305127 26305172 -2699484 + ARS406_DM Unknown Unknown 1 45 -308 1 785 1404 41 0 4 chrUextra 26305279 26305511 -2699145 + (CAAGA)n Simple_repeat Simple_repeat 1 231 0 1 785 1050 100 0 0 chrUextra 26305511 26305691 -2698965 + (ACTAG)n Simple_repeat Simple_repeat 1 180 0 1 785 1008 100 0 1 chrUextra 26305691 26305877 -2698779 + (CAAGA)n Simple_repeat Simple_repeat 1 185 0 1 785 1463 6 0 0 chrUextra 26305983 26306164 -2698492 - QUASIMODO_LTR LTR Gypsy -476 182 2 1 785 212 0 36 0 chrUextra 26306164 26306192 -2698464 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 785 28 48 0 0 chrUextra 26306411 26306453 -2698203 + AT_rich Low_complexity Low_complexity 1 42 0 1 785 1485 25 111 0 chrUextra 26306694 26306744 -2697912 + Stalker3_LTR LTR Gypsy 152 201 -171 1 785 207 0 0 0 chrUextra 26306744 26306767 -2697889 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 1 785 1485 25 111 0 chrUextra 26306767 26306915 -2697741 + Stalker3_LTR LTR Gypsy 202 370 -2 1 785 3178 31 0 0 chrUextra 26306915 26307305 -2697351 - R1_DM LINE R1 -523 4833 4444 1 785 513 16 0 0 chrUextra 26307405 26307466 -2697190 - NTS_DM Other Other -179 61 1 1 785 1861 0 17 13 chrUextra 26307466 26307705 -2696951 - NTS_DM Other Other 0 240 1 1 785 1861 0 17 13 chrUextra 26307705 26307944 -2696712 - NTS_DM Other Other 0 240 1 1 785 460 0 56 42 chrUextra 26307944 26308016 -2696640 - NTS_DM Other Other 0 240 168 1 785 37 39 0 0 chrUextra 26308346 26308397 -2696259 + AT_rich Low_complexity Low_complexity 1 51 0 1 785 22 35 0 0 chrUextra 26308498 26308527 -2696129 + AT_rich Low_complexity Low_complexity 1 29 0 1 785 320 321 7 7 chrUextra 26308851 26308992 -2695664 + Invader2_I LTR Gypsy 2624 2749 -1843 1 785 291 306 19 19 chrUextra 26309278 26309438 -2695218 + MDG3_I LTR Gypsy 3263 3422 -1564 1 785 2384 195 21 7 chrUextra 26309539 26310149 -2694507 + SAR_DM Satellite Satellite 205 823 -649 1 785 4766 0 2 4 chrUextra 26310249 26310802 -2693854 + LSU-rRNA_Dme rRNA rRNA 3349 3900 0 1 785 221 85 98 33 chrUextra 26310963 26311024 -2693632 + (CTCTG)n Simple_repeat Simple_repeat 1 65 0 1 785 577 103 78 10 chrUextra 26311035 26311543 -2693113 + GA-rich Low_complexity Low_complexity 1 542 0 1 785 917 0 0 0 chrUextra 26311671 26311776 -2692880 - SSU-rRNA_Dme rRNA rRNA -1890 105 1 1 785 32 0 0 0 chrUextra 26311908 26311940 -2692716 + AT_rich Low_complexity Low_complexity 1 32 0 1 785 4966 16 3 0 chrUextra 26312385 26312993 -2691663 + BLOOD_I LTR Gypsy 2006 2615 -3998 1 785 4491 64 0 0 chrUextra 26313093 26313704 -2690952 - STALKER4_I LTR Gypsy -670 5860 5250 1 785 1207 50 56 0 chrUextra 26314515 26314694 -2689962 + PROTOP DNA P 3046 3234 -1246 1 785 5110 0 0 3 chrUextra 26315226 26315837 -2688819 + LSU-rRNA_Dme rRNA rRNA 461 1069 -2831 1 785 2811 172 8 10 chrUextra 26315937 26316548 -2688108 + SAR_DM Satellite Satellite 408 1017 -455 1 785 4126 22 4 45 chrUextra 26316648 26317207 -2687449 - LSU-rRNA_Dme rRNA rRNA -3363 537 2 1 785 25 51 0 0 chrUextra 26317220 26317259 -2687397 + AT_rich Low_complexity Low_complexity 1 39 0 1 785 2660 179 12 7 chrUextra 26317367 26317970 -2686686 - SAR_DM Satellite Satellite -593 879 274 1 785 2925 233 26 38 chrUextra 26318079 26319392 -2685264 + SAR_DM Satellite Satellite 1 1298 -208 1 785 996 8 8 0 chrUextra 26319492 26319617 -2685039 - Copia_LTR LTR Copia -150 126 1 1 785 3867 20 0 0 chrUextra 26319617 26320103 -2684553 - IDEFIX_I LTR Gypsy -2244 3384 2899 1 785 1493 17 0 6 chrUextra 26320203 26320384 -2684272 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 785 1580 0 0 8 chrUextra 26320405 26320801 -2683855 + (TAGA)n Simple_repeat Simple_repeat 1 392 0 1 785 1917 105 60 60 chrUextra 26320915 26321299 -2683357 - Gypsy6_LTR LTR Gypsy -23 384 1 1 785 1455 137 0 0 chrUextra 26321299 26321525 -2683131 - Gypsy3_I LTR Gypsy 0 6177 5952 1 785 2236 187 34 10 chrUextra 26321625 26322220 -2682436 - SAR_DM Satellite Satellite -684 788 180 1 785 830 74 0 0 chrUextra 26322114 26322236 -2682420 + ARS406_DM Unknown Unknown 1 122 -231 1 785 5079 8 3 2 chrUextra 26322336 26322947 -2681709 + R1_DM LINE R1 3363 3974 -1382 1 785 5139 12 0 5 chrUextra 26323047 26323658 -2680998 + QUASIMODO_I LTR Gypsy 254 861 -5199 1 785 1620 0 0 0 chrUextra 26324469 26324765 -2679891 + (CATCT)n Simple_repeat Simple_repeat 1 296 0 1 785 1620 22 0 0 chrUextra 26324765 26325080 -2679576 + (CATGT)n Simple_repeat Simple_repeat 1 315 0 1 785 5152 3 3 3 chrUextra 26325180 26325791 -2678865 + LSU-rRNA_Dme rRNA rRNA 785 1395 -2505 1 785 29 60 0 0 chrUextra 26325989 26326039 -2678617 + AT_rich Low_complexity Low_complexity 1 50 0 1 785 23 68 0 0 chrUextra 26326085 26326129 -2678527 + AT_rich Low_complexity Low_complexity 1 44 0 1 785 21 89 0 0 chrUextra 26326167 26326223 -2678433 + AT_rich Low_complexity Low_complexity 1 56 0 1 785 4574 39 56 2 chrUextra 26326602 26327213 -2677443 - R1_DM LINE R1 -1911 3445 2802 1 785 884 46 0 8 chrUextra 26327313 26327444 -2677212 + NTS_DM Other Other 72 201 -39 1 785 853 18 0 27 chrUextra 26327496 26327608 -2677048 + NTS_DM Other Other 25 133 -107 1 785 1252 18 0 6 chrUextra 26327608 26327773 -2676883 + NTS_DM Other Other 38 201 -39 1 785 21 57 0 0 chrUextra 26327773 26327808 -2676848 + AT_rich Low_complexity Low_complexity 1 35 0 1 785 667 11 11 33 chrUextra 26327834 26327924 -2676732 + NTS_DM Other Other 25 112 -128 1 785 2439 90 19 19 chrUextra 26328042 26328633 -2676023 - DMSAT6 Satellite Satellite 0 591 1 1 785 1620 0 0 0 chrUextra 26328735 26328947 -2675709 + (GAGAA)n Simple_repeat Simple_repeat 1 212 0 1 785 2797 161 11 11 chrUextra 26329446 26330055 -2674601 - SAR_DM Satellite Satellite -439 1033 425 1 785 378 0 0 0 chrUextra 26330725 26330768 -2673888 - SSU-rRNA_Dme rRNA rRNA 0 1995 1953 1 785 4956 20 0 3 chrUextra 26331579 26332190 -2672466 - G_DM LINE Jockey -1397 2949 2341 1 785 3980 6 0 51 chrUextra 26332292 26332808 -2671848 + DM176_I LTR Gypsy 29 536 -5884 1 785 208 28 26 53 chrUextra 26332808 26332846 -2671810 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1 785 3980 6 0 51 chrUextra 26332846 26332901 -2671755 + DM176_I LTR Gypsy 537 571 -5849 1 785 3597 0 7 5 chrUextra 26333001 26333427 -2671229 + SSU-rRNA_Dme rRNA rRNA 1569 1995 0 1 785 21 89 0 0 chrUextra 26333446 26333502 -2671154 + AT_rich Low_complexity Low_complexity 1 56 0 1 785 2412 179 34 10 chrUextra 26333713 26334323 -2670333 + SAR_DM Satellite Satellite 278 902 -570 1 785 373 292 44 24 chrUextra 26334423 26334718 -2669938 - XDMR_DM Unknown Unknown -52 308 8 1 785 793 270 61 52 chrUextra 26334480 26335034 -2669622 + SAR_DM Satellite Satellite 435 993 -479 1 785 2339 112 13 28 chrUextra 26335135 26335736 -2668920 + DMSAT6 Satellite Satellite 1 591 -85 1 785 5227 2 0 2 chrUextra 26335845 26336456 -2668200 - R1_DM LINE R1 -3135 2221 1612 1 785 2164 187 69 24 chrUextra 26336556 26337167 -2667489 + SAR_DM Satellite Satellite 1 638 -216 1 785 5023 2 2 3 chrUextra 26337267 26337878 -2666778 - R1_DM LINE R1 -4158 1198 589 1 785 842 69 9 0 chrUextra 26338026 26338142 -2666514 - MAX_I LTR Pao -7241 673 557 1 785 390 152 91 71 chrUextra 26338388 26338586 -2666070 - MAX_I LTR Pao -7390 524 323 1 785 1748 19 5 0 chrUextra 26338689 26338901 -2665755 - MDG1_LTR LTR Gypsy -143 299 87 1 785 423 100 0 0 chrUextra 26338901 26338971 -2665685 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 785 1595 9 371 0 chrUextra 26338975 26339300 -2665356 - MDG1_I LTR Gypsy -98 6799 6164 1 785 1202 33 21 27 chrUextra 26339400 26339587 -2665069 + NTS_DM Other Other 55 240 0 1 785 1850 4 17 13 chrUextra 26339587 26339826 -2664830 + NTS_DM Other Other 1 240 0 1 785 1524 11 0 0 chrUextra 26339826 26340011 -2664645 + NTS_DM Other Other 1 185 -55 1 785 5107 23 0 0 chrUextra 26340111 26340722 -2663934 - MAX_I LTR Pao -1979 5935 5325 1 785 921 72 8 18 chrUextra 26340822 26341433 -2663223 - RSP Satellite Satellite -83 605 1 1 785 509 175 25 0 chrUextra 26342244 26342364 -2662292 - ARS406_DM Unknown Unknown -230 123 1 1 785 2282 180 27 24 chrUextra 26342262 26342855 -2661801 + SAR_DM Satellite Satellite 185 779 -693 1 785 5259 3 0 0 chrUextra 26342955 26343566 -2661090 + R1_DM LINE R1 2947 3557 -1799 1 785 202 265 0 0 chrUextra 26343671 26343720 -2660936 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 785 719 60 8 17 chrUextra 26344867 26344986 -2659670 + DMSAT6 Satellite Satellite 271 388 -82 1 98 3292 45 45 35 chrUextra 26345087 26345572 -2659084 + PROTOP_A DNA P 616 1105 0 1 786 2504 82 15 53 chrUextra 26345797 26346407 -2658249 - DMSAT6 Satellite Satellite -136 586 1 1 786 1620 0 0 0 chrUextra 26346510 26346797 -2657859 + (TCTTG)n Simple_repeat Simple_repeat 1 287 0 1 786 2133 44 3 64 chrUextra 26348021 26348335 -2656321 + MAX_I LTR Pao 1 295 -7619 1 786 1656 15 5 5 chrUextra 26348335 26348537 -2656119 + Gypsy_LTR LTR Gypsy 1 202 -280 1 786 5230 2 3 2 chrUextra 26349348 26349957 -2654699 + SSU-rRNA_Dme rRNA rRNA 1168 1777 -218 1 786 3435 124 24 29 chrUextra 26350057 26350646 -2654010 + TART LINE telomeric 4793 5378 -9099 1 786 2750 178 8 5 chrUextra 26350770 26351374 -2653282 - SAR_DM Satellite Satellite -620 852 247 1 786 1410 266 38 42 chrUextra 26351483 26352083 -2652573 + ROVER-I_DM LTR Gypsy 1434 2031 -4553 1 786 2490 185 7 10 chrUextra 26352197 26352780 -2651876 + SAR_DM Satellite Satellite 496 1076 -396 1 786 1491 38 0 6 chrUextra 26352897 26353257 -2651399 + (TAA)n Simple_repeat Simple_repeat 1 357 0 1 786 231 128 35 82 chrUextra 26353284 26353369 -2651287 + (TATAA)n Simple_repeat Simple_repeat 2 82 0 1 786 1293 55 6 0 chrUextra 26353607 26353788 -2650868 - ARS406_DM Unknown Unknown -171 182 1 1 786 1460 189 11 8 chrUextra 26353788 26354217 -2650439 + SAR_DM Satellite Satellite 1 612 -719 1 786 5134 0 0 2 chrUextra 26354317 26354927 -2649729 - LSU-rRNA_Dme rRNA rRNA -3066 834 226 1 786 4571 43 8 0 chrUextra 26355027 26355637 -2649019 - MDG1_I LTR Gypsy -4851 1745 1131 1 786 22 56 0 0 chrUextra 26355906 26355942 -2648714 + AT_rich Low_complexity Low_complexity 1 36 0 1 786 2762 161 15 10 chrUextra 26356447 26357056 -2647600 - SAR_DM Satellite Satellite -487 985 374 1 786 1856 196 47 24 chrUextra 26357157 26357767 -2646889 + SAR_DM Satellite Satellite 1 623 -354 1 786 4450 60 2 10 chrUextra 26357867 26358476 -2646180 - BATUMI_I LTR Pao -4032 3931 3328 1 786 2693 18 3 17 chrUextra 26358579 26358924 -2645732 + BATUMI_I LTR Pao 6662 7001 -962 1 786 843 306 3 3 chrUextra 26358762 26359051 -2645605 - MAX_I LTR Pao -1063 6851 6563 1 786 1230 7 0 0 chrUextra 26359042 26359186 -2645470 - BATUMI_I LTR Pao -2917 5046 4903 1 786 2855 164 8 7 chrUextra 26359288 26359896 -2644760 - SAR_DM Satellite Satellite -577 895 287 1 786 358 23 0 0 chrUextra 26359997 26360040 -2644616 - NTS_DM Other Other -197 43 1 1 786 1754 38 4 4 chrUextra 26360040 26360280 -2644376 - NTS_DM Other Other 0 240 1 1 786 1734 21 17 17 chrUextra 26360280 26360520 -2644136 - NTS_DM Other Other 0 240 1 1 786 517 0 51 38 chrUextra 26360520 26360599 -2644057 - NTS_DM Other Other 0 240 161 1 786 2739 165 15 15 chrUextra 26360713 26361317 -2643339 + SAR_DM Satellite Satellite 399 1002 -470 1 786 1158 141 0 7 chrUextra 26361417 26362024 -2642632 + (TA)n Simple_repeat Simple_repeat 1 602 0 1 786 2241 99 18 22 chrUextra 26362135 26362736 -2641920 - DMSAT6 Satellite Satellite -64 599 1 1 786 4859 44 0 2 chrUextra 26362837 26363447 -2641209 + TC1_DM DNA Tc1 779 1387 -279 1 786 662 67 0 0 chrUextra 26363547 26363651 -2641005 + DOC5_DM LINE Jockey 4162 4265 -417 1 786 3160 38 13 28 chrUextra 26363650 26364112 -2640544 + DOC5_DM LINE Jockey 4228 4682 0 1 786 2376 99 25 25 chrUextra 26364258 26364867 -2639789 + DMSAT6 Satellite Satellite 1 609 -63 1 786 4610 39 0 3 chrUextra 26364967 26365577 -2639079 + R1_DM LINE R1 499 1106 -4250 1 786 1067 23 0 0 chrUextra 26366387 26366519 -2638137 - R1_DM LINE R1 -3461 1895 1764 1 786 1705 169 43 68 chrUextra 26366514 26366997 -2637659 - R1_DM LINE R1 -3640 1716 1246 1 786 2329 98 2 56 chrUextra 26367097 26367706 -2636950 + DMSAT6 Satellite Satellite 1 575 -138 1 786 5131 7 0 5 chrUextra 26367807 26368417 -2636239 - Gypsy4_I LTR Gypsy -4454 1834 1228 1 786 2456 198 7 14 chrUextra 26368517 26369127 -2635529 + SAR_DM Satellite Satellite 1 605 -405 1 786 4688 26 41 3 chrUextra 26369227 26369837 -2634819 - NINJA_I LTR Pao -212 5799 5167 1 786 5105 2 7 3 chrUextra 26369937 26370547 -2634109 - LSU-rRNA_Dme rRNA rRNA -2153 1747 1136 1 786 1620 33 0 3 chrUextra 26370647 26371254 -2633402 + (CACAA)n Simple_repeat Simple_repeat 1 605 0 1 786 2748 171 16 8 chrUextra 26371357 26371965 -2632691 - SAR_DM Satellite Satellite -435 1037 425 1 786 5275 3 2 0 chrUextra 26372067 26372673 -2631983 + SSU-rRNA_Dme rRNA rRNA 8 614 -1381 1 786 4631 7 3 3 chrUextra 26372777 26373371 -2631285 + MAX_I LTR Pao 276 869 -7045 1 786 5019 26 2 0 chrUextra 26373487 26374097 -2630559 + R1_DM LINE R1 4364 4974 -382 1 786 2705 168 14 7 chrUextra 26374213 26374807 -2629849 + SAR_DM Satellite Satellite 326 923 -549 1 786 5243 2 0 3 chrUextra 26374907 26375517 -2629139 + LSU-rRNA_Dme rRNA rRNA 1972 2579 -1321 1 786 3364 35 2 21 chrUextra 26375752 26376227 -2628429 + STALKER4_I LTR Gypsy 831 1499 -5031 1 786 2418 189 19 5 chrUextra 26376327 26376912 -2627744 - SAR_DM Satellite Satellite -685 787 195 1 786 603 100 73 0 chrUextra 26376827 26376937 -2627719 + ARS406_DM Unknown Unknown 1 118 -235 1 786 21 89 0 0 chrUextra 26377052 26377108 -2627548 + AT_rich Low_complexity Low_complexity 1 56 0 1 786 2615 181 11 7 chrUextra 26377747 26378357 -2626299 + SAR_DM Satellite Satellite 257 869 -603 1 786 5116 13 0 0 chrUextra 26378457 26379067 -2625589 - ROO_I LTR Pao -2665 5591 4982 1 786 5138 3 2 2 chrUextra 26379167 26379777 -2624879 - R1_DM LINE R1 -2046 3310 2701 1 786 465 131 36 0 chrUextra 26380183 26380267 -2624389 - NTS_DM Other Other -150 90 4 1 786 771 9 0 27 chrUextra 26380377 26380487 -2624169 - NTS_DM Other Other -78 162 56 1 786 2950 35 47 5 chrUextra 26380587 26380988 -2623668 + PROTOP DNA P 6 423 -4057 1 786 1412 48 19 5 chrUextra 26380988 26381197 -2623459 + PROTOP DNA P 208 419 -4061 1 786 680 24 0 0 chrUextra 26381298 26381381 -2623275 - STALKER4_LTR LTR Gypsy -319 83 1 1 786 4065 2 6 4 chrUextra 26381381 26381907 -2622749 - STALKER4_I LTR Gypsy 0 6530 6004 1 786 213 227 0 0 chrUextra 26382128 26382172 -2622484 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 786 4901 30 5 2 chrUextra 26382717 26383327 -2621329 - DOC3_DM LINE Jockey -1817 2923 2312 1 786 5274 0 2 0 chrUextra 26383427 26384037 -2620619 - R1_DM LINE R1 -3290 2066 1456 1 786 2682 169 35 7 chrUextra 26384137 26384744 -2619912 + SAR_DM Satellite Satellite 256 879 -593 1 786 1620 0 0 0 chrUextra 26384847 26385229 -2619427 + (GAGAA)n Simple_repeat Simple_repeat 1 382 0 1 786 2515 187 3 7 chrUextra 26385557 26386139 -2618517 - SAR_DM Satellite Satellite -397 1075 496 1 786 5220 3 2 0 chrUextra 26386267 26386877 -2617779 - R1_DM LINE R1 -251 5105 4495 1 786 5254 0 2 2 chrUextra 26386984 26387587 -2617069 + LSU-rRNA_Dme rRNA rRNA 2980 3582 -318 1 786 666 12 0 35 chrUextra 26387695 26387781 -2616875 - NTS_DM Other Other -133 107 25 1 786 22 56 0 0 chrUextra 26387807 26387843 -2616813 + AT_rich Low_complexity Low_complexity 1 36 0 1 786 225 125 0 24 chrUextra 26387856 26387897 -2616759 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 786 246 150 0 0 chrUextra 26387940 26387980 -2616676 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 786 246 150 0 0 chrUextra 26388032 26388072 -2616584 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 786 22 56 0 0 chrUextra 26388077 26388113 -2616543 + AT_rich Low_complexity Low_complexity 1 36 0 1 786 948 0 0 9 chrUextra 26388185 26388297 -2616359 - LSU-rRNA_Dme rRNA rRNA 0 3900 3790 1 786 1494 187 3 3 chrUextra 26388398 26388730 -2615926 - SAR_DM Satellite Satellite -645 827 496 1 786 1291 161 4 8 chrUextra 26388745 26389007 -2615649 - SAR_DM Satellite Satellite -569 903 643 1 786 1039 269 46 41 chrUextra 26389111 26389717 -2614939 + SAR_DM Satellite Satellite 294 902 -570 1 786 2213 5 3 8 chrUextra 26389817 26390426 -2614230 - HETRP_DM Satellite Satellite -1280 606 1 1 786 4907 23 3 3 chrUextra 26390527 26391137 -2613519 + R1_DM LINE R1 4663 5272 -84 1 786 2786 154 32 10 chrUextra 26391245 26391847 -2612809 + SAR_DM Satellite Satellite 371 985 -487 1 786 4862 36 0 0 chrUextra 26391947 26392557 -2612099 - R1_DM LINE R1 -2216 3140 2531 1 786 914 9 0 0 chrUextra 26392657 26392767 -2611889 - ROO_I LTR Pao -939 7317 7208 1 786 4320 0 0 0 chrUextra 26392757 26393267 -2611389 - ROO_I LTR Pao -1183 7073 6564 1 786 1158 122 0 0 chrUextra 26393368 26393623 -2611033 + (TA)n Simple_repeat Simple_repeat 1 255 0 1 786 2262 15 0 0 chrUextra 26393623 26393889 -2610767 - DMLTR5 LTR Gypsy 0 266 1 1 786 681 11 0 11 chrUextra 26393889 26393977 -2610679 - HMSBEAGLE_I LTR Gypsy 0 6529 6443 1 786 2260 108 25 17 chrUextra 26394080 26394682 -2609974 + DMSAT6 Satellite Satellite 1 606 -108 1 786 5109 0 2 0 chrUextra 26394787 26395397 -2609259 - ROO_I LTR Pao -4578 3678 3068 1 786 2391 194 7 7 chrUextra 26395497 26396077 -2608579 + SAR_DM Satellite Satellite 497 1076 -396 1 786 1620 0 0 0 chrUextra 26396215 26396395 -2608261 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 786 2195 99 10 49 chrUextra 26396915 26397524 -2607132 - DMSAT6 Satellite Satellite -39 584 1 1 786 927 0 0 0 chrUextra 26397624 26397727 -2606929 + (GAGAA)n Simple_repeat Simple_repeat 2 104 0 1 786 3105 43 43 166 chrUextra 26398333 26398942 -2605714 + CIRCE LINE Composite 983 1516 -4840 1 786 590 0 0 0 chrUextra 26399042 26399109 -2605547 - NTS_DM Other Other -173 67 1 1 786 1861 0 17 13 chrUextra 26399109 26399348 -2605308 - NTS_DM Other Other 0 240 1 1 786 1806 13 17 13 chrUextra 26399348 26399587 -2605069 - NTS_DM Other Other 0 240 1 1 786 399 0 62 47 chrUextra 26399587 26399651 -2605005 - NTS_DM Other Other 0 240 176 1 786 5000 15 2 0 chrUextra 26399752 26400360 -2604296 + STALKER4_I LTR Gypsy 5233 5841 -689 1 786 2471 257 42 34 chrUextra 26400460 26401778 -2602878 + SAR_DM Satellite Satellite 1 1328 -227 1 786 3161 274 21 37 chrUextra 26401894 26403196 -2601460 - SAR_DM Satellite Satellite -398 1281 1 1 786 2512 180 7 23 chrUextra 26403298 26403901 -2600755 + SAR_DM Satellite Satellite 507 1099 -373 1 786 28 71 0 0 chrUextra 26404023 26404079 -2600577 + AT_rich Low_complexity Low_complexity 1 56 0 1 786 23 68 0 0 chrUextra 26404125 26404169 -2600487 + AT_rich Low_complexity Low_complexity 1 44 0 1 786 21 89 0 0 chrUextra 26404207 26404263 -2600393 + AT_rich Low_complexity Low_complexity 1 56 0 1 786 903 76 6 21 chrUextra 26404714 26405318 -2599338 - RSP Satellite Satellite -35 595 1 1 786 598 200 7 14 chrUextra 26405458 26405600 -2599056 - HETRP_DM Satellite Satellite -203 1669 1529 1 786 584 214 7 14 chrUextra 26405742 26405884 -2598772 - HETRP_DM Satellite Satellite -203 1669 1529 1 786 2654 4 141 0 chrUextra 26406179 26406741 -2597915 - FW_DM LINE Jockey -2 4690 4050 1 786 427 31 0 15 chrUextra 26406847 26406913 -2597743 + NTS_DM Other Other 137 201 -39 1 786 870 9 0 27 chrUextra 26406965 26407077 -2597579 + NTS_DM Other Other 25 133 -107 1 786 1252 18 0 6 chrUextra 26407077 26407242 -2597414 + NTS_DM Other Other 38 201 -39 1 786 21 57 0 0 chrUextra 26407242 26407277 -2597379 + AT_rich Low_complexity Low_complexity 1 35 0 1 786 832 9 9 27 chrUextra 26407303 26407414 -2597242 + NTS_DM Other Other 25 133 -107 1 786 293 28 0 0 chrUextra 26407414 26407450 -2597206 + NTS_DM Other Other 38 73 -167 1 786 2758 173 8 10 chrUextra 26407550 26408158 -2596498 - SAR_DM Satellite Satellite -441 1031 425 1 786 2607 185 20 10 chrUextra 26408968 26409575 -2595081 + SAR_DM Satellite Satellite 425 1037 -435 1 786 4107 60 44 10 chrUextra 26409677 26410286 -2594370 - MDG1_I LTR Gypsy -5588 1008 379 1 786 373 40 20 0 chrUextra 26410386 26410436 -2594220 + ARS406_DM Unknown Unknown 139 189 -164 1 786 2528 192 28 5 chrUextra 26410393 26410991 -2593665 - SAR_DM Satellite Satellite -615 857 246 1 786 2083 117 8 41 chrUextra 26411120 26411704 -2592952 - DMSAT6 Satellite Satellite -3 564 1 1 786 1656 18 17 21 chrUextra 26411804 26412037 -2592619 - NTS_DM Other Other -8 232 1 1 786 1408 20 20 20 chrUextra 26412037 26412240 -2592416 - NTS_DM Other Other 0 240 38 1 786 817 0 0 0 chrUextra 26412240 26412336 -2592320 - NTS_DM Other Other -107 133 38 1 786 570 13 13 0 chrUextra 26412336 26412413 -2592243 - NTS_DM Other Other -107 133 56 1 786 4232 50 44 15 chrUextra 26412513 26413122 -2591534 - R1_DM LINE R1 -4422 934 308 1 786 319 299 16 16 chrUextra 26415419 26415548 -2589108 - DIVER2_I LTR Pao -1779 2368 2240 1 786 431 299 60 14 chrUextra 26415675 26415892 -2588764 - DIVER2_I LTR Pao -2328 1819 1593 1 786 346 164 0 0 chrUextra 26415897 26415958 -2588698 - G3_DM LINE Jockey -4093 512 452 1 786 3263 10 2 0 chrUextra 26416058 26416452 -2588204 - DM176_LTR LTR Gypsy -112 395 1 1 786 1226 24 0 46 chrUextra 26416452 26416605 -2588051 + STALKER4_LTR LTR Gypsy 258 402 0 1 786 300 25 0 24 chrUextra 26416605 26416646 -2588010 + STALKER4_I LTR Gypsy 1 40 -6490 1 786 519 115 0 0 chrUextra 26416768 26416855 -2587801 - SAR_DM Satellite Satellite -843 629 543 1 786 2166 182 12 18 chrUextra 26416866 26417376 -2587280 - SAR_DM Satellite Satellite -396 1076 570 1 786 3403 0 0 57 chrUextra 26417476 26417914 -2586742 - LSU-rRNA_Dme rRNA rRNA -3487 413 1 1 786 21 95 0 0 chrUextra 26417926 26417989 -2586667 + AT_rich Low_complexity Low_complexity 1 63 0 1 786 2424 177 11 14 chrUextra 26418195 26418767 -2585889 + SAR_DM Satellite Satellite 507 1076 -396 1 786 242 119 16 48 chrUextra 26418732 26418794 -2585862 - XDMR_DM Unknown Unknown 0 360 301 1 786 1620 2 0 0 chrUextra 26418897 26419503 -2585153 + (AATAG)n Simple_repeat Simple_repeat 1 606 0 1 786 372 43 0 0 chrUextra 26419603 26419649 -2585007 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1 786 420 121 239 11 chrUextra 26419651 26419743 -2584913 + MDG1_LTR LTR Gypsy 89 201 -241 1 786 1042 20 0 0 chrUextra 26419737 26419883 -2584773 + FW_DM LINE Jockey 4547 4692 0 1 786 733 70 102 0 chrUextra 26419890 26420018 -2584638 + MDG1_I LTR Gypsy 4735 4875 -1721 1 786 1272 7 0 0 chrUextra 26420018 26420163 -2584493 + (TAA)n Simple_repeat Simple_repeat 3 147 0 1 786 22 35 0 0 chrUextra 26420429 26420458 -2584198 + AT_rich Low_complexity Low_complexity 1 29 0 1 786 208 200 31 0 chrUextra 26420767 26420832 -2583824 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 786 693 0 0 0 chrUextra 26421026 26421103 -2583553 + (TTCTC)n Simple_repeat Simple_repeat 5 81 0 1 786 2319 194 33 8 chrUextra 26421730 26422339 -2582317 + SAR_DM Satellite Satellite 209 832 -640 1 786 192 77 0 0 chrUextra 26422532 26422558 -2582098 + (A)n Simple_repeat Simple_repeat 1 26 0 1 786 503 194 152 54 chrUextra 26422587 26423016 -2581640 + ROVER-I_DM LTR Gypsy 131 601 -5983 1 786 4874 17 2 18 chrUextra 26423148 26423757 -2580899 - BATUMI_I LTR Pao -6211 1752 1154 1 786 2290 97 26 40 chrUextra 26423857 26424461 -2580195 - DMSAT6 Satellite Satellite -63 595 1 1 786 2725 176 10 5 chrUextra 26424570 26425175 -2579481 - SAR_DM Satellite Satellite -593 879 272 1 786 2757 220 20 37 chrUextra 26426710 26427616 -2577040 + SAR_DM Satellite Satellite 1 890 -514 1 786 685 50 10 20 chrUextra 26427536 26427637 -2577019 - ARS406_DM Unknown Unknown -164 189 90 1 786 1515 188 3 14 chrUextra 26427642 26428008 -2576648 + SAR_DM Satellite Satellite 496 857 -615 1 786 2328 92 23 15 chrUextra 26428116 26428720 -2575936 - DMSAT6 Satellite Satellite 0 609 1 1 786 1064 120 0 18 chrUextra 26428820 26429042 -2575614 + (TA)n Simple_repeat Simple_repeat 1 217 0 1 786 1107 136 0 6 chrUextra 26429050 26429408 -2575248 + (CATA)n Simple_repeat Simple_repeat 1 355 0 1 786 1476 183 36 3 chrUextra 26429529 26430138 -2574518 - SAR_DM Satellite Satellite -611 628 1 1 786 5298 3 2 0 chrUextra 26430238 26430847 -2573809 + SSU-rRNA_Dme rRNA rRNA 41 650 -1345 1 786 2463 174 38 11 chrUextra 26430947 26431556 -2573100 - SAR_DM Satellite Satellite -470 1002 378 1 786 4779 43 0 3 chrUextra 26431656 26432265 -2572391 - R1_DM LINE R1 -2046 3310 2704 1 786 1674 5 0 0 chrUextra 26432365 26432559 -2572097 - BATUMI_I LTR Pao -7769 194 1 1 786 2178 11 0 25 chrUextra 26432559 26432838 -2571818 - BATUMI_LTR LTR Pao 0 272 1 1 786 1831 0 17 17 chrUextra 26433091 26433331 -2571325 - NTS_DM Other Other 0 240 1 1 786 1825 8 17 13 chrUextra 26433331 26433570 -2571086 - NTS_DM Other Other 0 240 1 1 786 754 0 35 26 chrUextra 26433570 26433683 -2570973 - NTS_DM Other Other 0 240 127 1 786 1312 0 22 16 chrUextra 26433783 26433965 -2570691 + NTS_DM Other Other 58 240 0 1 786 1847 4 17 13 chrUextra 26433965 26434204 -2570452 + NTS_DM Other Other 1 240 0 1 786 1257 19 0 18 chrUextra 26434204 26434369 -2570287 + NTS_DM Other Other 1 162 -78 1 786 21 82 0 0 chrUextra 26434745 26434794 -2569862 + AT_rich Low_complexity Low_complexity 1 49 0 1 786 22 35 0 0 chrUextra 26434917 26434946 -2569710 + AT_rich Low_complexity Low_complexity 1 29 0 1 786 4413 49 0 20 chrUextra 26435203 26435808 -2568848 + R1_DM LINE R1 257 849 -4507 1 786 22 35 0 0 chrUextra 26436094 26436123 -2568533 + AT_rich Low_complexity Low_complexity 1 29 0 1 786 224 185 31 0 chrUextra 26436409 26436474 -2568182 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 786 5311 3 0 0 chrUextra 26436619 26437228 -2567428 + LSU-rRNA_Dme rRNA rRNA 2073 2681 -1219 1 786 4495 37 33 2 chrUextra 26437334 26437937 -2566719 - R1_DM LINE R1 -4105 1251 630 1 786 2836 109 74 39 chrUextra 26438037 26438646 -2566010 + STALKER4_I LTR Gypsy 601 1230 -5300 1 786 4579 21 0 2 chrUextra 26438747 26439353 -2565303 + ACCORD2_I LTR Gypsy 6477 7081 -131 1 786 2705 21 0 0 chrUextra 26439455 26439787 -2564869 + G2_DM LINE Jockey 2771 3102 0 1 786 419 233 97 0 chrUextra 26439909 26440044 -2564612 + TIRANT_I LTR Gypsy 3777 3855 -3837 1 786 22 0 0 0 chrUextra 26440362 26440384 -2564272 + AT_rich Low_complexity Low_complexity 1 22 0 1 786 937 34 0 0 chrUextra 26441346 26441463 -2563193 + DIVER2_I LTR Pao 2417 2533 -1614 1 786 4781 10 0 3 chrUextra 26441582 26442191 -2562465 - STALKER4_I LTR Gypsy -171 6359 5753 1 786 2682 163 23 11 chrUextra 26442291 26442900 -2561756 - SAR_DM Satellite Satellite -515 957 342 1 786 5097 2 0 2 chrUextra 26443023 26443609 -2561047 + LSU-rRNA_Dme rRNA rRNA 2640 3224 -676 1 786 5307 13 35 0 chrUextra 26443709 26444318 -2560338 + FW_DM LINE Jockey 531 1160 -3532 1 786 3023 170 8 10 chrUextra 26444418 26445025 -2559631 + SAR_DM Satellite Satellite 414 1019 -453 1 786 1128 312 35 29 chrUextra 26445855 26446403 -2558253 + HMSBEAGLE_I LTR Gypsy 4040 4590 -1939 1 786 3015 168 12 10 chrUextra 26446545 26447148 -2557508 - SAR_DM Satellite Satellite -500 972 369 1 786 5570 0 0 0 chrUextra 26447254 26447862 -2556794 - ROO_I LTR Pao -3872 4384 3777 1 786 5003 33 0 5 chrUextra 26447962 26448570 -2556086 + NINJA_I LTR Pao 1538 2142 -3869 1 786 5614 0 5 0 chrUextra 26448670 26449278 -2555378 + LSU-rRNA_Dme rRNA rRNA 3045 3655 -245 1 786 2595 100 5 23 chrUextra 26450086 26450694 -2553962 - DMSAT6 Satellite Satellite -61 596 1 1 786 1400 13 0 0 chrUextra 26450794 26450946 -2553710 + DMLTR5 LTR Gypsy 115 266 0 1 786 4013 2 26 4 chrUextra 26450945 26451402 -2553254 + HMSBEAGLE_I LTR Gypsy 1 467 -6062 1 786 2452 88 10 42 chrUextra 26451502 26452084 -2552572 - DMSAT6 Satellite Satellite -38 563 1 1 786 3318 96 104 48 chrUextra 26452213 26452818 -2551838 - DM297_I LTR Gypsy -5344 823 185 1 786 363 82 5 110 chrUextra 26452924 26453026 -2551630 + MDG1_I LTR Gypsy 6524 6596 0 1 786 1566 11 0 0 chrUextra 26453026 26453206 -2551450 + (TAA)n Simple_repeat Simple_repeat 1 180 0 1 786 1693 142 81 12 chrUextra 26453206 26453526 -2551130 + MDG1_LTR LTR Gypsy 48 389 -53 1 786 5130 5 7 2 chrUextra 26453626 26454234 -2550422 + TART LINE telomeric 9247 9857 -4620 1 786 2959 169 16 10 chrUextra 26454334 26454942 -2549714 - SAR_DM Satellite Satellite -649 823 212 1 786 5575 0 2 3 chrUextra 26455042 26455650 -2549006 + SSU-rRNA_Dme rRNA rRNA 586 1192 -803 1 786 4056 0 0 0 chrUextra 26455750 26456192 -2548464 - ROO_I LTR Pao -1094 7162 6721 1 786 1416 6 0 0 chrUextra 26456192 26456358 -2548298 - ROO_I LTR Pao -2283 5973 5808 1 786 2996 178 5 8 chrUextra 26457874 26458482 -2546174 - SAR_DM Satellite Satellite -563 909 304 1 786 5440 0 0 2 chrUextra 26458584 26459190 -2545466 - LSU-rRNA_Dme rRNA rRNA -2927 973 369 1 786 21 0 0 0 chrUextra 26459450 26459471 -2545185 + AT_rich Low_complexity Low_complexity 1 21 0 1 786 2116 202 86 36 chrUextra 26461415 26462021 -2542635 + TAHRE LINE telomeric 9260 9895 -568 1 786 1687 21 0 0 chrUextra 26462122 26462313 -2542343 + FW_DM LINE Jockey 4430 4620 -72 1 786 938 155 77 6 chrUextra 26462561 26462730 -2541926 + DNAREP1_DM LINE Penelope 22 202 -392 1 786 309 350 0 0 chrUextra 26463720 26463863 -2540793 - Gypsy7_I LTR Gypsy -4060 924 782 1 786 2060 12 74 0 chrUextra 26463904 26464146 -2540510 - PROTOP DNA P 0 4480 4221 1 786 3346 61 42 1 chrUextra 26464246 26464854 -2539802 + PROTOP DNA P 239 753 -3727 1 786 5294 16 5 5 chrUextra 26464954 26465562 -2539094 - Gypsy4_I LTR Gypsy -1113 5175 4568 1 786 1004 82 7 18 chrUextra 26465665 26466250 -2538406 + RSP Satellite Satellite 1 578 0 1 786 2058 41 0 0 chrUextra 26466370 26466613 -2538043 + DM1731_LTR LTR Copia 94 336 0 1 786 3275 6 3 3 chrUextra 26466613 26466978 -2537678 + DM1731_I LTR Copia 1 365 -3611 1 786 5325 20 0 0 chrUextra 26467080 26467686 -2536970 - R1_DM LINE R1 -1853 3503 2898 1 786 2732 200 12 5 chrUextra 26467787 26468391 -2536265 + SAR_DM Satellite Satellite 272 879 -593 1 786 201 94 0 0 chrUextra 26468534 26468566 -2536090 + (A)n Simple_repeat Simple_repeat 1 32 0 1 786 823 19 0 0 chrUextra 26469910 26470017 -2534639 + FW_DM LINE Jockey 4586 4692 0 1 786 4398 4 0 2 chrUextra 26470030 26470518 -2534138 - R1_DM LINE R1 -310 5046 4560 1 786 2864 184 7 8 chrUextra 26470618 26471221 -2533435 + SAR_DM Satellite Satellite 475 1076 -396 1 786 2964 178 10 7 chrUextra 26471326 26471930 -2532726 + SAR_DM Satellite Satellite 298 903 -569 1 786 2767 173 35 21 chrUextra 26472034 26472642 -2532014 - SAR_DM Satellite Satellite -558 914 299 1 786 34 24 0 0 chrUextra 26472938 26472979 -2531677 + AT_rich Low_complexity Low_complexity 1 41 0 1 786 773 164 379 47 chrUextra 26472990 26473349 -2531307 - TART LINE telomeric -3986 10491 10014 1 786 1865 108 16 60 chrUextra 26473519 26473835 -2530821 + Gypsy6A_LTR LTR Gypsy 1 302 -118 1 786 3027 63 7 17 chrUextra 26474886 26475291 -2529365 - Baggins1 LINE LOA -262 5191 4791 1 786 5290 21 0 0 chrUextra 26475574 26476182 -2528474 - NINJA_I LTR Pao -3304 2707 2100 1 98 2416 120 12 31 chrUextra 26476285 26476890 -2527766 - DMSAT6 Satellite Satellite -94 593 1 1 787 291 54 0 0 chrUextra 26476990 26477027 -2527629 + (TTCTC)n Simple_repeat Simple_repeat 3 39 0 1 787 5464 8 2 5 chrUextra 26479114 26479722 -2524934 - SSU-rRNA_Dme rRNA rRNA -201 1794 1189 1 787 5170 15 2 13 chrUextra 26479822 26480430 -2524226 + NINJA_I LTR Pao 4928 5528 -483 1 787 5485 0 2 2 chrUextra 26480530 26481138 -2523518 - R1_DM LINE R1 -1941 3415 2808 1 787 936 9 0 27 chrUextra 26481272 26481384 -2523272 + NTS_DM Other Other 25 133 -107 1 787 1350 18 0 6 chrUextra 26481384 26481549 -2523107 + NTS_DM Other Other 38 201 -39 1 787 21 57 0 0 chrUextra 26481549 26481584 -2523072 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 847 19 9 36 chrUextra 26481610 26481722 -2522934 + NTS_DM Other Other 25 133 -107 1 787 846 0 0 10 chrUextra 26481722 26481819 -2522837 + NTS_DM Other Other 38 133 -107 1 787 249 0 0 0 chrUextra 26481819 26481846 -2522810 + NTS_DM Other Other 38 64 -176 1 787 1660 168 71 186 chrUextra 26481946 26482554 -2522102 - TAHRE LINE telomeric -2877 7586 7168 1 787 5300 18 2 0 chrUextra 26482654 26483262 -2521394 + STALKER4_I LTR Gypsy 2219 2827 -3703 1 787 303 112 16 34 chrUextra 26483362 26483434 -2521222 - HETA LINE telomeric -5037 9440 9381 1 787 1916 140 119 22 chrUextra 26483434 26483836 -2520820 + GTWIN_LTR LTR Gypsy 1 441 -54 1 787 468 62 0 30 chrUextra 26483903 26483970 -2520686 - HETA LINE telomeric -1197 4884 4825 1 787 4005 14 22 12 chrUextra 26484070 26484559 -2520097 + BATUMI_I LTR Pao 6508 7001 -962 1 787 1641 271 47 48 chrUextra 26484077 26484678 -2519978 - MAX_I LTR Pao -744 7170 6571 1 787 1953 187 8 18 chrUextra 26484778 26484809 -2519847 - SAR_DM Satellite Satellite -439 602 562 1 787 1095 95 0 0 chrUextra 26484809 26484967 -2519689 + ARS406_DM Unknown Unknown 1 158 -195 1 787 1953 187 8 18 chrUextra 26484967 26485386 -2519270 - SAR_DM Satellite Satellite -439 561 1 1 787 2888 166 45 8 chrUextra 26485487 26486094 -2518562 + SAR_DM Satellite Satellite 246 874 -598 1 787 3440 166 8 0 chrUextra 26486194 26486802 -2517854 - Gypsy5_I LTR Gypsy -1604 4905 4293 1 787 1553 21 0 16 chrUextra 26486902 26487096 -2517560 - NTS_DM Other Other -49 191 1 1 787 1903 17 17 17 chrUextra 26487096 26487336 -2517320 - NTS_DM Other Other 0 240 1 1 787 1329 6 23 17 chrUextra 26487336 26487510 -2517146 - NTS_DM Other Other 0 240 66 1 787 1229 135 80 20 chrUextra 26487610 26487860 -2516796 + ROVER-I_DM LTR Gypsy 6320 6584 0 1 787 1766 132 42 42 chrUextra 26487860 26488216 -2516440 + ROVER-LTR_DM LTR Gypsy 1 356 -11 1 787 5168 36 0 0 chrUextra 26489026 26489634 -2515022 - MAX_I LTR Pao -2209 5705 5098 1 787 3045 178 10 3 chrUextra 26489734 26490342 -2514314 + SAR_DM Satellite Satellite 267 878 -594 1 787 289 0 0 0 chrUextra 26490442 26490474 -2514182 - LSU-rRNA_Dme rRNA rRNA -2081 1819 1788 1 787 4646 4 9 6 chrUextra 26490516 26491049 -2513607 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1257 1 787 5056 23 40 0 chrUextra 26491149 26491756 -2512900 - STALKER4_I LTR Gypsy -3117 3413 2783 1 787 3999 2 0 0 chrUextra 26491891 26492319 -2512337 + ROO_LTR LTR Pao 1 428 0 1 787 1350 0 0 0 chrUextra 26492319 26492463 -2512193 + ROO_I LTR Pao 1 144 -8112 1 787 2866 180 10 11 chrUextra 26492563 26493170 -2511486 - SAR_DM Satellite Satellite -489 983 378 1 787 5626 0 0 0 chrUextra 26493270 26493877 -2510779 + ROO_I LTR Pao 1978 2584 -5672 1 787 2077 43 0 12 chrUextra 26493977 26494234 -2510422 - G2_DM LINE Jockey -1438 1664 1411 1 787 264 0 109 0 chrUextra 26494356 26494402 -2510254 + (TTATA)n Simple_repeat Simple_repeat 2 52 0 1 787 3126 64 22 10 chrUextra 26494684 26495094 -2509562 - DMCR1A LINE CR1 -401 4069 3655 1 787 1491 98 0 5 chrUextra 26495087 26495291 -2509365 - DMCR1A LINE CR1 -950 3520 3318 1 787 2502 97 13 40 chrUextra 26495391 26495998 -2508658 - DMSAT6 Satellite Satellite -82 590 1 1 787 2991 162 15 12 chrUextra 26496107 26496705 -2507951 - SAR_DM Satellite Satellite -569 903 304 1 787 2861 32 0 0 chrUextra 26496806 26497153 -2507503 - I_DM LINE I -5269 962 616 1 787 1620 0 0 0 chrUextra 26497153 26497410 -2507246 + (GAGAA)n Simple_repeat Simple_repeat 1 257 0 1 787 21 89 0 0 chrUextra 26497997 26498053 -2506603 + AT_rich Low_complexity Low_complexity 1 56 0 1 787 374 22 0 21 chrUextra 26498072 26498119 -2506537 - SSU-rRNA_Dme rRNA rRNA 0 1995 1950 1 787 3309 0 0 0 chrUextra 26499633 26500000 -2504656 + LSU-rRNA_Dme rRNA rRNA 573 939 -2961 1 787 2181 4 0 0 chrUextra 26500000 26500240 -2504416 + LSU-rRNA_Dme rRNA rRNA 940 1179 -2721 1 787 1833 5 0 0 chrUextra 26500340 26500543 -2504113 - SSU-rRNA_Dme rRNA rRNA -1792 203 1 1 787 32 0 0 0 chrUextra 26500675 26500707 -2503949 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 444 37 0 0 chrUextra 26501756 26501810 -2502846 + (TTCTC)n Simple_repeat Simple_repeat 5 58 0 1 787 4548 46 76 5 chrUextra 26502461 26503068 -2501588 - MDG1_I LTR Gypsy -2229 4367 3718 1 787 3915 2 0 54 chrUextra 26503291 26503775 -2500881 + LSU-rRNA_Dme rRNA rRNA 1 458 -3442 1 787 24 0 0 0 chrUextra 26504426 26504450 -2500206 + AT_rich Low_complexity Low_complexity 1 24 0 1 787 1620 0 0 0 chrUextra 26504582 26504971 -2499685 + (AATAG)n Simple_repeat Simple_repeat 1 389 0 1 787 1962 57 69 0 chrUextra 26505289 26505551 -2499105 + DM1731_LTR LTR Copia 57 336 0 1 787 3095 3 3 0 chrUextra 26505551 26505896 -2498760 + DM1731_I LTR Copia 1 346 -3630 1 787 4871 25 3 0 chrUextra 26505996 26506568 -2498088 + R1_DM LINE R1 4783 5356 0 1 787 2814 187 10 3 chrUextra 26506703 26507310 -2497346 + SAR_DM Satellite Satellite 240 850 -622 1 787 2860 176 8 8 chrUextra 26507410 26508013 -2496643 - SAR_DM Satellite Satellite -471 1001 399 1 787 2544 180 25 26 chrUextra 26508825 26509431 -2495225 - SAR_DM Satellite Satellite -361 1111 507 1 787 2788 175 8 13 chrUextra 26510242 26510845 -2493811 - SAR_DM Satellite Satellite -569 903 304 1 787 5359 7 0 5 chrUextra 26510945 26511552 -2493104 + G2_DM LINE Jockey 1177 1780 -1322 1 787 5519 0 2 0 chrUextra 26511652 26512259 -2492397 - SSU-rRNA_Dme rRNA rRNA -898 1097 490 1 787 2460 176 26 8 chrUextra 26512359 26512965 -2491691 - SAR_DM Satellite Satellite -243 1229 373 1 787 2517 184 30 21 chrUextra 26513067 26513673 -2490983 - SAR_DM Satellite Satellite -361 1111 501 1 787 628 115 10 0 chrUextra 26513773 26513877 -2490779 - ARS406_DM Unknown Unknown -248 105 1 1 787 2664 196 5 7 chrUextra 26513784 26514380 -2490276 + SAR_DM Satellite Satellite 195 789 -683 1 787 4698 13 2 2 chrUextra 26514480 26515016 -2489640 + R1_DM LINE R1 4821 5356 0 1 787 316 26 0 0 chrUextra 26515049 26515087 -2489569 + R1_DM LINE R1 1 38 -5318 1 787 2643 195 7 8 chrUextra 26515188 26515794 -2488862 + SAR_DM Satellite Satellite 205 809 -663 1 787 739 306 65 43 chrUextra 26515912 26516469 -2488187 - MDG1_I LTR Gypsy -3858 2738 2170 1 787 2761 176 15 8 chrUextra 26516601 26517208 -2487448 + SAR_DM Satellite Satellite 197 807 -665 1 787 2917 166 10 8 chrUextra 26517309 26517910 -2486746 - SAR_DM Satellite Satellite -502 970 369 1 787 25 0 0 0 chrUextra 26518418 26518443 -2486213 + AT_rich Low_complexity Low_complexity 1 25 0 1 787 2745 163 123 23 chrUextra 26518722 26519324 -2485332 - TAHRE LINE telomeric -102 10361 9700 1 787 1185 68 0 149 chrUextra 26519429 26519671 -2484985 - Invader3_LTR LTR Gypsy -92 206 1 1 787 3053 11 25 0 chrUextra 26519671 26520036 -2484620 - Invader3_I LTR Gypsy 0 4888 4515 1 787 5363 2 0 2 chrUextra 26520136 26520743 -2483913 - ROO_I LTR Pao -2774 5482 4877 1 787 2715 171 12 28 chrUextra 26520843 26521449 -2483207 + SAR_DM Satellite Satellite 523 1118 -354 1 787 4912 16 84 0 chrUextra 26521550 26522157 -2482499 - STALKER4_I LTR Gypsy -3337 3193 2536 1 787 2781 176 10 13 chrUextra 26522257 26522863 -2481793 - SAR_DM Satellite Satellite -500 972 369 1 787 2929 171 8 8 chrUextra 26522965 26523571 -2481085 - SAR_DM Satellite Satellite -610 862 257 1 787 2523 197 14 8 chrUextra 26523671 26524261 -2480395 - SAR_DM Satellite Satellite -693 779 187 1 787 668 120 0 8 chrUextra 26524160 26524278 -2480378 + ARS406_DM Unknown Unknown 1 117 -236 1 787 361 3 229 0 chrUextra 26525344 26525685 -2478971 + (ATATG)n Simple_repeat Simple_repeat 1 418 0 1 787 1580 12 0 8 chrUextra 26525792 26526043 -2478613 + (TTCTC)n Simple_repeat Simple_repeat 1 249 0 1 787 1133 78 6 0 chrUextra 26526043 26526222 -2478434 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 787 1358 18 0 6 chrUextra 26526233 26526399 -2478257 + (CTTAT)n Simple_repeat Simple_repeat 2 166 0 1 787 5330 5 5 3 chrUextra 26526499 26527106 -2477550 + LSU-rRNA_Dme rRNA rRNA 1098 1705 -2195 1 787 5532 0 2 2 chrUextra 26527206 26527813 -2476843 - LSU-rRNA_Dme rRNA rRNA -310 3590 2984 1 787 2803 178 10 10 chrUextra 26527913 26528520 -2476136 + SAR_DM Satellite Satellite 462 1068 -404 1 787 2855 161 12 10 chrUextra 26528639 26529227 -2475429 + SAR_DM Satellite Satellite 326 914 -558 1 787 2620 90 17 32 chrUextra 26529335 26529934 -2474722 + DMSAT6 Satellite Satellite 1 590 0 1 787 3725 5 0 0 chrUextra 26530741 26531155 -2473501 - R2_DM LINE R2 -2538 1069 656 1 787 1768 5 0 0 chrUextra 26531153 26531348 -2473308 - LSU-rRNA_Dme rRNA rRNA -1321 2579 2385 1 787 5432 0 2 5 chrUextra 26531448 26532055 -2472601 + SSU-rRNA_Dme rRNA rRNA 1125 1729 -266 1 787 3755 25 2 0 chrUextra 26532155 26532597 -2472059 - R1_DM LINE R1 -3358 1998 1556 1 787 1207 71 0 0 chrUextra 26532608 26532762 -2471894 - R1_DM LINE R1 -3897 1459 1306 1 787 2582 171 21 14 chrUextra 26532863 26533467 -2471189 - SAR_DM Satellite Satellite -711 607 1 1 787 2281 56 14 83 chrUextra 26534281 26534629 -2470027 - Baggins1 LINE LOA -4987 466 143 1 787 2765 186 18 5 chrUextra 26534983 26535589 -2469067 + SAR_DM Satellite Satellite 256 869 -603 1 787 4761 4 0 0 chrUextra 26535689 26536242 -2468414 + Invader2_I LTR Gypsy 3772 4324 -268 1 787 278 39 78 0 chrUextra 26536244 26536295 -2468361 + Invader2_I LTR Gypsy 4465 4519 -73 1 787 5521 0 2 2 chrUextra 26536395 26537001 -2467655 - LSU-rRNA_Dme rRNA rRNA -372 3528 2923 1 787 1036 41 0 7 chrUextra 26537101 26537247 -2467409 + NTS_DM Other Other 57 201 -39 1 787 907 9 0 27 chrUextra 26537299 26537411 -2467245 + NTS_DM Other Other 25 133 -107 1 787 1284 24 0 6 chrUextra 26537411 26537576 -2467080 + NTS_DM Other Other 38 201 -39 1 787 21 57 0 0 chrUextra 26537576 26537611 -2467045 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 473 30 29 43 chrUextra 26537637 26537707 -2466949 + NTS_DM Other Other 25 93 -147 1 787 5043 21 10 2 chrUextra 26537807 26538413 -2466243 + DOC2_DM LINE Jockey 891 1501 -3292 1 787 1393 121 22 72 chrUextra 26538513 26538789 -2465867 - Gypsy6A_LTR LTR Gypsy -158 262 1 1 787 1850 61 59 67 chrUextra 26538789 26539119 -2465537 - MAX_I LTR Pao -7419 495 127 1 787 4835 2 0 48 chrUextra 26539219 26539825 -2464831 + LSU-rRNA_Dme rRNA rRNA 75 651 -3249 1 787 2478 194 9 10 chrUextra 26539925 26540503 -2464153 + SAR_DM Satellite Satellite 500 1076 -396 1 787 231 185 0 18 chrUextra 26540476 26540531 -2464125 - XDMR_DM Unknown Unknown -7 353 300 1 787 32 0 0 0 chrUextra 26540725 26540757 -2463899 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 3168 3 0 0 chrUextra 26540889 26541237 -2463419 + SSU-rRNA_Dme rRNA rRNA 1 348 -1647 1 787 5151 12 2 3 chrUextra 26541339 26541943 -2462713 - DMRT1B LINE R1 -3887 1296 694 1 787 5488 0 2 2 chrUextra 26542045 26542649 -2462007 + SSU-rRNA_Dme rRNA rRNA 1224 1827 -168 1 787 2875 175 10 8 chrUextra 26543455 26544061 -2460595 + SAR_DM Satellite Satellite 267 873 -599 1 787 2888 174 8 7 chrUextra 26544162 26544764 -2459892 - SAR_DM Satellite Satellite -577 895 293 1 787 5312 0 0 2 chrUextra 26544867 26545473 -2459183 + LSU-rRNA_Dme rRNA rRNA 244 848 -3052 1 787 5059 10 5 0 chrUextra 26545573 26546179 -2458477 + Invader2_I LTR Gypsy 3758 4366 -226 1 787 3054 168 8 3 chrUextra 26546279 26546877 -2457779 - SAR_DM Satellite Satellite -626 846 246 1 787 282 125 0 0 chrUextra 26546837 26546885 -2457771 + ARS406_DM Unknown Unknown 1 48 -305 1 787 3754 5 0 0 chrUextra 26546985 26547404 -2457252 + LSU-rRNA_Dme rRNA rRNA 2113 2531 -1369 1 787 1578 26 5 5 chrUextra 26547401 26547591 -2457065 + R2_DM LINE R2 5 194 -3413 1 787 2676 179 15 10 chrUextra 26547691 26548283 -2456373 + SAR_DM Satellite Satellite 482 1076 -396 1 787 2588 92 20 17 chrUextra 26548397 26549003 -2455653 + DMSAT6 Satellite Satellite 1 607 -97 1 787 5105 2 2 0 chrUextra 26549149 26549709 -2454947 - LSU-rRNA_Dme rRNA rRNA 0 3900 3340 1 787 4496 25 0 0 chrUextra 26549809 26550415 -2454241 - TART_B1 LINE telomeric -8397 2257 1652 1 787 2353 73 0 6 chrUextra 26550805 26551121 -2453535 + G2_DM LINE Jockey 2448 2761 -341 1 787 5082 23 2 0 chrUextra 26551221 26551827 -2452829 - MDG1_I LTR Gypsy -1660 4936 4330 1 787 21 57 0 0 chrUextra 26551998 26552033 -2452623 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 834 275 6 9 chrUextra 26552186 26552531 -2452125 - Gypsy11_I LTR Gypsy -137 3387 3044 1 787 1123 20 0 7 chrUextra 26552635 26552784 -2451872 + NTS_DM Other Other 54 201 -39 1 787 21 57 0 0 chrUextra 26552784 26552819 -2451837 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 840 9 9 36 chrUextra 26552845 26552957 -2451699 + NTS_DM Other Other 25 133 -107 1 787 851 0 0 0 chrUextra 26552957 26553053 -2451603 + NTS_DM Other Other 38 133 -107 1 787 1352 22 16 21 chrUextra 26553053 26553239 -2451417 + NTS_DM Other Other 38 222 -18 1 787 5530 2 2 0 chrUextra 26553339 26553945 -2450711 + LSU-rRNA_Dme rRNA rRNA 2945 3551 -349 1 787 2685 177 8 25 chrUextra 26554046 26554647 -2450009 + SAR_DM Satellite Satellite 500 1090 -382 1 787 5161 33 0 0 chrUextra 26555457 26556063 -2448593 + R1_DM LINE R1 4202 4807 -549 1 787 2909 162 19 15 chrUextra 26556172 26556768 -2447888 + SAR_DM Satellite Satellite 191 788 -684 1 787 2646 164 33 35 chrUextra 26557575 26558181 -2446475 + SAR_DM Satellite Satellite 201 805 -667 1 787 1141 290 28 40 chrUextra 26558294 26558886 -2445770 - BLOOD_I LTR Gypsy -4148 2465 1828 1 787 2775 258 45 9 chrUextra 26558992 26560285 -2444371 - SAR_DM Satellite Satellite -514 1339 1 1 787 1620 0 0 0 chrUextra 26560416 26560776 -2443880 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 787 2834 179 15 7 chrUextra 26561113 26561709 -2442947 - SAR_DM Satellite Satellite -635 837 237 1 787 23 0 0 0 chrUextra 26561948 26561971 -2442685 + AT_rich Low_complexity Low_complexity 1 23 0 1 787 2399 130 17 19 chrUextra 26562545 26563123 -2441533 - DMSAT6 Satellite Satellite -3 576 1 1 787 5518 2 0 0 chrUextra 26563929 26564535 -2440121 + LSU-rRNA_Dme rRNA rRNA 477 1082 -2818 1 787 1559 12 0 4 chrUextra 26564635 26564884 -2439772 + (CACAA)n Simple_repeat Simple_repeat 1 248 0 1 787 1290 62 5 9 chrUextra 26565063 26565241 -2439415 + DMRT1B LINE R1 1 336 -4847 1 787 4901 7 38 55 chrUextra 26565341 26565947 -2438709 + MICROPIA_I LTR Gypsy 1486 2081 -2395 1 787 4304 4 0 0 chrUextra 26566047 26566522 -2438134 - DMRT1B LINE R1 -227 4956 4482 1 787 1179 0 0 0 chrUextra 26566522 26566653 -2438003 + (TTGTG)n Simple_repeat Simple_repeat 2 132 0 1 787 2422 105 22 12 chrUextra 26566761 26567359 -2437297 - DMSAT6 Satellite Satellite 0 603 1 1 787 5125 40 0 0 chrUextra 26567459 26568065 -2436591 - R1_DM LINE R1 -3433 1923 1318 1 787 1620 0 0 0 chrUextra 26568165 26568467 -2436189 + (GAGAA)n Simple_repeat Simple_repeat 1 302 0 1 787 815 0 0 0 chrUextra 26568871 26568958 -2435698 - SSU-rRNA_Dme rRNA rRNA -1908 87 1 1 787 32 0 0 0 chrUextra 26569091 26569123 -2435533 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 25 0 0 0 chrUextra 26569452 26569477 -2435179 + AT_rich Low_complexity Low_complexity 1 25 0 1 787 2922 178 8 7 chrUextra 26569577 26570167 -2434489 - SAR_DM Satellite Satellite -556 916 326 1 787 5582 0 2 3 chrUextra 26570283 26570889 -2433767 - SSU-rRNA_Dme rRNA rRNA -180 1815 1211 1 787 2413 176 8 5 chrUextra 26571001 26571595 -2433061 - SAR_DM Satellite Satellite -396 596 1 1 787 2040 213 50 26 chrUextra 26571697 26572194 -2432462 - Gypsy12_LTR LTR Gypsy -1827 509 1 1 787 828 74 0 0 chrUextra 26572193 26572301 -2432355 - Gypsy12_I LTR Gypsy 0 5546 5439 1 787 659 50 0 29 chrUextra 26572403 26572506 -2432150 + NTS_DM Other Other 102 201 -39 1 787 901 28 0 27 chrUextra 26572558 26572670 -2431986 + NTS_DM Other Other 25 133 -107 1 787 1188 61 0 12 chrUextra 26572670 26572836 -2431820 + NTS_DM Other Other 38 201 -39 1 787 923 18 0 27 chrUextra 26572888 26573000 -2431656 + NTS_DM Other Other 25 133 -107 1 787 1826 25 17 21 chrUextra 26573142 26573383 -2431273 + NTS_DM Other Other 1 240 0 1 787 1899 17 17 17 chrUextra 26573383 26573623 -2431033 + NTS_DM Other Other 1 240 0 1 787 828 11 0 0 chrUextra 26573623 26573713 -2430943 + NTS_DM Other Other 1 90 -150 1 787 3019 173 12 5 chrUextra 26573826 26574419 -2430237 - SAR_DM Satellite Satellite -620 852 256 1 787 1673 0 20 15 chrUextra 26574519 26574723 -2429933 + NTS_DM Other Other 36 240 0 1 787 1992 4 17 13 chrUextra 26574723 26574962 -2429694 + NTS_DM Other Other 1 240 0 1 787 1362 19 0 0 chrUextra 26574962 26575119 -2429537 + NTS_DM Other Other 1 157 -83 1 787 23 68 0 0 chrUextra 26576441 26576485 -2428171 + AT_rich Low_complexity Low_complexity 1 44 0 1 787 713 0 0 0 chrUextra 26576635 26576712 -2427944 + LSU-rRNA_Dme rRNA rRNA 2506 2582 -1318 1 787 4830 6 0 0 chrUextra 26576716 26577240 -2427416 + R2_DM LINE R2 985 1508 -2099 1 787 2707 183 7 24 chrUextra 26577340 26577927 -2426729 + SAR_DM Satellite Satellite 500 1076 -396 1 787 917 72 3 18 chrUextra 26578045 26578650 -2426006 + RSP Satellite Satellite 1 596 0 1 787 1210 249 78 92 chrUextra 26578754 26579355 -2425301 + Gypsy12_LTR LTR Gypsy 401 993 -1343 1 787 5166 28 0 0 chrUextra 26579459 26580060 -2424596 - R1_DM LINE R1 -2146 3210 2610 1 787 2480 95 26 26 chrUextra 26580160 26580748 -2423908 + DMSAT6 Satellite Satellite 1 588 -37 1 787 483 133 100 0 chrUextra 26580887 26580977 -2423679 + DNAREP1_DM LINE Penelope 1 99 -495 1 787 2716 56 66 31 chrUextra 26581051 26581468 -2423188 + DM176_LTR LTR Gypsy 64 481 -26 1 787 2416 89 8 33 chrUextra 26581570 26582175 -2422481 - DMSAT6 Satellite Satellite -120 589 1 1 787 513 204 0 0 chrUextra 26582279 26582426 -2422230 + (CATAA)n Simple_repeat Simple_repeat 2 148 0 1 787 5458 0 2 0 chrUextra 26582980 26583585 -2421071 - LSU-rRNA_Dme rRNA rRNA -2877 1023 418 1 787 1275 7 0 0 chrUextra 26583685 26583823 -2420833 - ROO_I LTR Pao -8118 138 1 1 787 3879 14 0 2 chrUextra 26583823 26584252 -2420404 - ROO_LTR LTR Pao 0 428 1 1 787 354 0 0 0 chrUextra 26584252 26584290 -2420366 - ROO_I LTR Pao 0 8256 8219 1 787 1026 80 7 20 chrUextra 26584396 26584995 -2419661 + RSP Satellite Satellite 1 591 0 1 787 5508 5 0 0 chrUextra 26585095 26585700 -2418956 - R1_DM LINE R1 -1625 3731 3127 1 787 3026 171 30 5 chrUextra 26585804 26586405 -2418251 + SAR_DM Satellite Satellite 246 861 -611 1 787 1924 5 0 5 chrUextra 26586505 26586717 -2417939 + R1_DM LINE R1 5146 5356 0 1 787 3650 2 0 0 chrUextra 26586715 26587110 -2417546 + LSU-rRNA_Dme rRNA rRNA 2640 3034 -866 1 787 897 0 113 0 chrUextra 26587210 26587334 -2417322 + Invader2_I LTR Gypsy 4455 4592 0 1 787 2329 23 8 0 chrUextra 26587334 26587598 -2417058 + Invader2_LTR LTR Gypsy 1 266 0 1 787 719 231 84 24 chrUextra 26587602 26587815 -2416841 + Gypsy6_I LTR Gypsy 3447 3672 -3340 1 787 3030 167 13 10 chrUextra 26587915 26588520 -2416136 - SAR_DM Satellite Satellite -436 1036 430 1 787 21 89 0 0 chrUextra 26588965 26589021 -2415635 + AT_rich Low_complexity Low_complexity 1 56 0 1 787 1714 5 0 0 chrUextra 26589040 26589225 -2415431 - SSU-rRNA_Dme rRNA rRNA 0 1995 1811 1 787 5092 0 38 2 chrUextra 26589325 26589930 -2414726 - ROO_I LTR Pao -7094 1162 536 1 787 5209 17 0 3 chrUextra 26590030 26590635 -2414021 + NOMAD_I LTR Gypsy 5548 6150 -422 1 787 228 183 68 27 chrUextra 26590743 26590816 -2413840 + NTS_DM Other Other 145 220 -20 1 787 534 119 36 0 chrUextra 26590839 26590923 -2413733 + NTS_DM Other Other 4 90 -150 1 787 28 48 0 0 chrUextra 26591196 26591238 -2413418 + AT_rich Low_complexity Low_complexity 1 42 0 1 787 3634 0 3 0 chrUextra 26591440 26591830 -2412826 - LSU-rRNA_Dme rRNA rRNA -1722 2178 1788 1 787 1471 6 11 6 chrUextra 26591871 26592045 -2412611 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1617 1 787 5111 31 0 2 chrUextra 26592145 26592750 -2411906 + NINJA_I LTR Pao 1752 2355 -3656 1 787 5263 22 0 0 chrUextra 26592850 26593448 -2411208 + R1_DM LINE R1 3169 3766 -1590 1 787 5234 23 2 2 chrUextra 26593555 26594160 -2410496 - DMRT1B LINE R1 -337 4846 4242 1 787 5389 8 2 2 chrUextra 26594965 26595570 -2409086 + FW_DM LINE Jockey 1547 2151 -2541 1 787 1620 0 0 0 chrUextra 26595682 26595862 -2408794 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 787 499 325 54 47 chrUextra 26596389 26596924 -2407732 + Invader3_I LTR Gypsy 2491 3029 -1859 1 787 1913 43 6 5 chrUextra 26597080 26597428 -2407228 + TABOR_I LTR Gypsy 5878 6336 0 1 787 2435 0 0 0 chrUextra 26597426 26597685 -2406971 + TABOR_LTR LTR Gypsy 1 259 -247 1 787 2714 178 8 20 chrUextra 26597792 26598383 -2406273 + SAR_DM Satellite Satellite 536 1119 -353 1 787 240 0 0 0 chrUextra 26598490 26598516 -2406140 - NTS_DM Other Other -177 63 38 1 787 936 9 0 27 chrUextra 26598516 26598628 -2406028 - NTS_DM Other Other -107 133 25 1 787 21 57 0 0 chrUextra 26598654 26598689 -2405967 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 1323 24 0 6 chrUextra 26598689 26598854 -2405802 - NTS_DM Other Other -39 201 38 1 787 936 9 0 27 chrUextra 26598854 26598966 -2405690 - NTS_DM Other Other -107 133 25 1 787 515 40 0 13 chrUextra 26599018 26599095 -2405561 - NTS_DM Other Other -39 201 126 1 787 2772 188 16 7 chrUextra 26599900 26600505 -2404151 + SAR_DM Satellite Satellite 198 808 -664 1 787 2460 98 8 21 chrUextra 26600605 26601210 -2403446 - DMSAT6 Satellite Satellite -89 596 1 1 787 3160 36 313 43 chrUextra 26601310 26601888 -2402768 + MDG1_I LTR Gypsy 5863 6596 0 1 787 4609 4 4 0 chrUextra 26602015 26602521 -2402135 - R1_DM LINE R1 -4848 508 1 1 787 241 36 0 0 chrUextra 26602521 26602549 -2402107 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2605 1 787 646 0 0 0 chrUextra 26602551 26602620 -2402036 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2586 1 787 2633 184 7 28 chrUextra 26602720 26603325 -2401331 - SAR_DM Satellite Satellite -356 1116 525 1 787 1439 0 0 0 chrUextra 26604130 26604285 -2400371 - HOBO DNA hAT -2860 156 2 1 787 189 0 0 0 chrUextra 26604323 26604344 -2400312 + (AGGGGG)n Simple_repeat Simple_repeat 4 24 0 1 787 195 42 0 0 chrUextra 26604395 26604419 -2400237 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 1 787 5073 20 93 2 chrUextra 26604835 26605440 -2399216 + MAX_I LTR Pao 3095 3754 -4160 1 787 4393 74 2 31 chrUextra 26605540 26606143 -2398513 + Gypsy10_I LTR Gypsy 2522 3106 -2172 1 787 727 216 6 19 chrUextra 26606397 26606553 -2398103 + HETRP_DM Satellite Satellite 1529 1682 -190 1 787 727 206 0 7 chrUextra 26606706 26606848 -2397808 + HETRP_DM Satellite Satellite 1529 1669 -203 1 787 2832 187 13 7 chrUextra 26606951 26607555 -2397101 + SAR_DM Satellite Satellite 192 799 -673 1 788 29 47 0 0 chrUextra 26607987 26608030 -2396626 + AT_rich Low_complexity Low_complexity 1 43 0 1 788 5454 3 0 0 chrUextra 26608360 26608965 -2395691 + ROO_I LTR Pao 3046 3650 -4606 1 788 5449 0 3 0 chrUextra 26609065 26609670 -2394986 + LSU-rRNA_Dme rRNA rRNA 227 833 -3067 1 788 963 68 8 0 chrUextra 26609770 26609902 -2394754 + ARS406_DM Unknown Unknown 57 189 -164 1 788 2880 178 8 8 chrUextra 26609786 26610375 -2394281 - SAR_DM Satellite Satellite -542 930 342 1 788 2504 98 8 42 chrUextra 26610475 26611072 -2393584 + DMSAT6 Satellite Satellite 1 577 -51 1 788 5046 11 0 5 chrUextra 26611182 26611785 -2392871 - Invader2_I LTR Gypsy -273 4319 3626 1 788 2718 171 10 12 chrUextra 26611885 26612490 -2392166 - SAR_DM Satellite Satellite -435 1037 434 1 788 4300 22 5 41 chrUextra 26612590 26613195 -2391461 - Gypsy12_LTR LTR Gypsy -800 1536 954 1 788 5242 0 0 0 chrUextra 26613295 26613900 -2390756 - HETA LINE telomeric -3283 2798 2194 1 788 5134 3 0 0 chrUextra 26614000 26614605 -2390051 + ROO_I LTR Pao 4845 5449 -2807 1 788 4802 45 0 0 chrUextra 26614705 26615310 -2389346 - R1_DM LINE R1 -3512 1844 1240 1 788 5145 2 0 0 chrUextra 26615410 26616015 -2388641 - ROO_I LTR Pao -3812 4444 3840 1 788 1702 0 14 5 chrUextra 26616117 26616330 -2388326 - NTS_DM Other Other -25 215 1 1 788 1850 4 17 13 chrUextra 26616330 26616569 -2388087 - NTS_DM Other Other 0 240 1 1 788 929 27 26 26 chrUextra 26616569 26616720 -2387936 - NTS_DM Other Other 0 240 90 1 788 3210 41 0 2 chrUextra 26617010 26617425 -2387231 - G2_DM LINE Jockey -46 3056 2643 1 788 1657 18 18 18 chrUextra 26617527 26617756 -2386900 - NTS_DM Other Other -11 229 1 1 788 1408 20 20 20 chrUextra 26617756 26617959 -2386697 - NTS_DM Other Other 0 240 38 1 788 802 10 0 0 chrUextra 26617959 26618055 -2386601 - NTS_DM Other Other -107 133 38 1 788 549 13 13 0 chrUextra 26618055 26618130 -2386526 - NTS_DM Other Other -107 133 58 1 788 4781 26 7 2 chrUextra 26618232 26618835 -2385821 - R1_DM LINE R1 -2161 3195 2590 1 788 2586 74 18 13 chrUextra 26618935 26619540 -2385116 - DMSAT6 Satellite Satellite -418 608 1 1 788 2446 33 184 11 chrUextra 26619642 26620245 -2384411 - PROTOP_B DNA P -407 746 39 1 788 1041 95 0 0 chrUextra 26620706 26620950 -2383706 + (ACATG)n Simple_repeat Simple_repeat 1 244 0 1 788 5140 2 2 5 chrUextra 26621754 26622358 -2382298 + LSU-rRNA_Dme rRNA rRNA 891 1492 -2408 1 788 4017 2 0 9 chrUextra 26622596 26623062 -2381594 + SSU-rRNA_Dme rRNA rRNA 1 462 -1533 1 788 2474 181 12 10 chrUextra 26623162 26623763 -2380893 - SAR_DM Satellite Satellite -502 970 369 1 788 2388 0 3 3 chrUextra 26623869 26624153 -2380503 + DM297_LTR LTR Gypsy 131 414 0 1 788 2580 156 8 8 chrUextra 26624570 26625094 -2379562 + SAR_DM Satellite Satellite 380 903 -569 1 788 532 41 0 0 chrUextra 26625101 26625174 -2379482 - ARS406_DM Unknown Unknown -195 158 86 1 788 32 0 0 0 chrUextra 26625312 26625344 -2379312 + AT_rich Low_complexity Low_complexity 1 32 0 1 788 3524 2 0 0 chrUextra 26625476 26625878 -2378778 + SSU-rRNA_Dme rRNA rRNA 1 402 -1593 1 788 3502 264 39 24 chrUextra 26625981 26627282 -2377374 - SAR_DM Satellite Satellite -262 1320 1 1 788 1547 255 77 50 chrUextra 26627387 26627986 -2376670 - Gypsy2_I LTR Gypsy -1178 4957 4343 1 788 2460 174 50 12 chrUextra 26628090 26628694 -2375962 + SAR_DM Satellite Satellite 224 850 -622 1 788 2194 104 15 32 chrUextra 26628802 26629397 -2375259 - DMSAT6 Satellite Satellite 0 585 1 1 788 4248 2 0 0 chrUextra 26629498 26629986 -2374670 + LSU-rRNA_Dme rRNA rRNA 2145 2632 -1268 1 788 932 0 9 9 chrUextra 26629986 26630102 -2374554 + R1_DM LINE R1 1 116 -5240 1 788 1260 6 22 17 chrUextra 26630202 26630381 -2374275 + NTS_DM Other Other 61 240 0 1 788 1847 4 17 13 chrUextra 26630381 26630620 -2374036 + NTS_DM Other Other 1 240 0 1 788 1279 12 0 18 chrUextra 26630620 26630785 -2373871 + NTS_DM Other Other 1 162 -78 1 788 5171 0 3 3 chrUextra 26630906 26631510 -2373146 + SSU-rRNA_Dme rRNA rRNA 1131 1734 -261 1 788 3497 21 2 0 chrUextra 26631610 26632035 -2372621 + R1_DM LINE R1 4641 5066 -290 1 788 904 53 0 0 chrUextra 26632032 26632146 -2372510 + R1_DM LINE R1 5243 5356 0 1 788 251 30 0 0 chrUextra 26632181 26632214 -2372442 + R1_DM LINE R1 3 35 -5321 1 788 1100 53 0 7 chrUextra 26632314 26632467 -2372189 + (GAGAA)n Simple_repeat Simple_repeat 2 153 0 1 788 3805 113 45 0 chrUextra 26633018 26633622 -2371034 - HETA LINE telomeric -3010 3071 2441 1 788 2333 93 12 21 chrUextra 26633744 26634326 -2370330 - DMSAT6 Satellite Satellite 0 576 1 1 788 5262 0 2 0 chrUextra 26634426 26635030 -2369626 + LSU-rRNA_Dme rRNA rRNA 2670 3274 -626 1 788 1997 19 11 8 chrUextra 26635130 26635394 -2369262 + ACCORD2_I LTR Gypsy 1103 1367 -5845 1 788 1001 42 235 23 chrUextra 26635475 26635696 -2368960 + ACCORD2_I LTR Gypsy 1507 1774 -5438 1 788 312 67 0 0 chrUextra 26635689 26635734 -2368922 + ACCORD2_I LTR Gypsy 7122 7166 -46 1 788 180 0 0 0 chrUextra 26636555 26636575 -2368081 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 788 2118 111 5 102 chrUextra 26637946 26638535 -2366121 - DMSAT6 Satellite Satellite -28 531 1 1 788 23 0 0 0 chrUextra 26640150 26640173 -2364483 + AT_rich Low_complexity Low_complexity 1 23 0 1 788 208 281 10 0 chrUextra 26640335 26640431 -2364225 + T-rich Low_complexity Low_complexity 2 98 0 1 788 5274 0 2 0 chrUextra 26640762 26641366 -2363290 - LSU-rRNA_Dme rRNA rRNA -713 3187 2583 1 788 2780 131 93 51 chrUextra 26641500 26642070 -2362586 - STALKER4_I LTR Gypsy -4336 2194 1601 1 788 2024 174 80 33 chrUextra 26642170 26642772 -2361884 - SAR_DM Satellite Satellite -315 1157 528 1 788 1302 49 11 0 chrUextra 26642877 26643060 -2361596 + TART LINE telomeric 10478 10662 -3815 1 788 220 27 54 0 chrUextra 26643091 26643128 -2361528 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 1 788 962 159 42 54 chrUextra 26643139 26643472 -2361184 + HETA LINE telomeric 19 347 -5734 1 788 2337 107 15 61 chrUextra 26643579 26644182 -2360474 - DMSAT6 Satellite Satellite -4 575 1 1 788 2747 165 8 18 chrUextra 26644284 26644882 -2359774 + SAR_DM Satellite Satellite 346 937 -535 1 788 2551 82 21 16 chrUextra 26645693 26646270 -2358386 + DMSAT6 Satellite Satellite 1 580 -35 1 788 2564 157 27 17 chrUextra 26646408 26646992 -2357664 + SAR_DM Satellite Satellite 369 958 -514 1 788 5118 5 0 3 chrUextra 26647098 26647702 -2356954 - ROO_I LTR Pao -2489 5767 5166 1 788 4857 18 17 3 chrUextra 26647802 26648406 -2356250 + R1_DM LINE R1 1745 2356 -3000 1 788 1620 23 0 2 chrUextra 26648506 26649110 -2355546 + (CTATT)n Simple_repeat Simple_repeat 1 602 0 1 788 2848 159 8 7 chrUextra 26649210 26649799 -2354857 + SAR_DM Satellite Satellite 348 937 -535 1 788 1014 51 0 0 chrUextra 26649676 26649814 -2354842 - ARS406_DM Unknown Unknown -164 189 52 1 788 2509 188 8 5 chrUextra 26649914 26650509 -2354147 - SAR_DM Satellite Satellite -684 788 192 1 788 2336 89 10 45 chrUextra 26650618 26651222 -2353434 - DMSAT6 Satellite Satellite -96 582 1 1 788 799 325 40 35 chrUextra 26651322 26651867 -2352789 + HMSBEAGLE_I LTR Gypsy 4106 4653 -1876 1 788 2463 180 9 10 chrUextra 26652026 26652604 -2352052 + SAR_DM Satellite Satellite 500 1076 -396 1 788 238 183 0 16 chrUextra 26652569 26652630 -2352026 - XDMR_DM Unknown Unknown 0 360 301 1 788 691 81 0 0 chrUextra 26652732 26652831 -2351825 + ARS406_DM Unknown Unknown 91 189 -164 1 788 2604 158 12 9 chrUextra 26652750 26653318 -2351338 - SAR_DM Satellite Satellite -577 895 326 1 788 1089 37 0 0 chrUextra 26653434 26653569 -2351087 - R2_DM LINE R2 -379 3228 3094 1 788 2262 30 47 0 chrUextra 26653584 26653882 -2350774 + G2_DM LINE Jockey 2778 3089 -13 1 788 1093 76 6 0 chrUextra 26653881 26654038 -2350618 - R2_DM LINE R2 -1267 2340 2183 1 788 2274 174 15 32 chrUextra 26654143 26654742 -2349914 - SAR_DM Satellite Satellite -361 1111 523 1 788 2434 188 13 12 chrUextra 26654847 26655446 -2349210 - SAR_DM Satellite Satellite -577 895 296 1 788 2681 171 12 10 chrUextra 26655546 26656149 -2348507 + SAR_DM Satellite Satellite 430 1033 -439 1 788 953 118 6 0 chrUextra 26656250 26656428 -2348228 + (CTATT)n Simple_repeat Simple_repeat 1 179 0 1 788 1252 60 3 48 chrUextra 26656466 26656836 -2347820 + (CTATT)n Simple_repeat Simple_repeat 1 353 0 1 788 2471 180 48 5 chrUextra 26656972 26657552 -2347104 + SAR_DM Satellite Satellite 333 937 -535 1 788 1171 201 17 3 chrUextra 26657658 26657958 -2346698 - SAR_DM Satellite Satellite -684 788 485 1 788 2510 3 0 3 chrUextra 26657962 26658262 -2346394 - DM176_LTR LTR Gypsy 0 507 209 1 788 4128 30 75 2 chrUextra 26658362 26658958 -2345698 + R1_DM LINE R1 2367 3006 -2350 1 788 2629 182 8 8 chrUextra 26659070 26659668 -2344988 + SAR_DM Satellite Satellite 425 1022 -450 1 788 2068 182 13 8 chrUextra 26659773 26660371 -2344285 + SAR_DM Satellite Satellite 1 600 -1037 1 788 4902 28 3 0 chrUextra 26660472 26661074 -2343582 - R1_DM LINE R1 -3312 2044 1441 1 788 2022 4 0 0 chrUextra 26661174 26661418 -2343238 + ROVER-I_DM LTR Gypsy 6341 6584 0 1 788 2934 0 0 25 chrUextra 26661418 26661777 -2342879 + ROVER-LTR_DM LTR Gypsy 1 350 -17 1 788 2486 188 27 5 chrUextra 26661880 26662480 -2342176 - SAR_DM Satellite Satellite -582 890 278 1 788 2585 167 88 7 chrUextra 26663986 26664589 -2340067 - SAR_DM Satellite Satellite -444 1028 377 1 788 2714 179 13 3 chrUextra 26664692 26665290 -2339366 - SAR_DM Satellite Satellite -642 830 227 1 788 1224 0 0 0 chrUextra 26665396 26665532 -2339124 + (GAGAA)n Simple_repeat Simple_repeat 1 136 0 1 788 4432 20 7 5 chrUextra 26666095 26666698 -2337958 + STALKER4_I LTR Gypsy 5886 6489 -41 1 788 908 61 3 19 chrUextra 26666829 26667401 -2337255 + RSP Satellite Satellite 1 563 0 1 788 3230 77 70 27 chrUextra 26667505 26668104 -2336552 + STALKER4_I LTR Gypsy 824 1448 -5082 1 788 2549 176 40 7 chrUextra 26668204 26668806 -2335850 - SAR_DM Satellite Satellite -550 922 301 1 788 2201 113 23 48 chrUextra 26668907 26669510 -2335146 + DMSAT6 Satellite Satellite 1 587 -3 1 788 906 42 0 0 chrUextra 26669610 26669729 -2334927 + (TCTTG)n Simple_repeat Simple_repeat 2 120 0 1 788 2387 145 10 1 chrUextra 26670376 26670916 -2333740 + Gypsy2_I LTR Gypsy 1713 2709 -4303 1 788 1651 18 18 18 chrUextra 26671016 26671245 -2333411 + NTS_DM Other Other 12 240 0 1 788 1734 21 17 17 chrUextra 26671245 26671485 -2333171 + NTS_DM Other Other 1 240 0 1 788 1136 8 0 0 chrUextra 26671485 26671619 -2333037 + NTS_DM Other Other 1 134 -106 1 788 2445 71 28 40 chrUextra 26671721 26672321 -2332335 + DMSAT6 Satellite Satellite 1 592 -97 1 788 2632 171 17 10 chrUextra 26673125 26673723 -2330933 - SAR_DM Satellite Satellite -641 831 230 1 788 4418 20 7 11 chrUextra 26673856 26674421 -2330235 - BATUMI_I LTR Pao -962 7001 6439 1 788 4902 25 3 2 chrUextra 26674531 26675133 -2329523 + IDEFIX_I LTR Gypsy 1592 2194 -3434 1 788 2723 169 10 10 chrUextra 26675234 26675837 -2328819 - SAR_DM Satellite Satellite -470 1002 400 1 788 1684 68 416 5 chrUextra 26675937 26676367 -2328289 + PROTOP_B DNA P 249 856 -297 1 788 1211 68 0 0 chrUextra 26676375 26676538 -2328118 - Jockey2 LINE Jockey -1608 1820 1658 1 788 4798 20 0 0 chrUextra 26677343 26677946 -2326710 - QUASIMODO_I LTR Gypsy -4622 1438 836 1 788 1290 129 36 88 chrUextra 26678046 26678351 -2326305 + TART LINE telomeric 3074 3362 -11115 1 788 1672 136 20 30 chrUextra 26678346 26678649 -2326007 + TART LINE telomeric 3683 3982 -10495 1 788 662 178 34 39 chrUextra 26678758 26678963 -2325693 + DNAREP1_DM LINE Penelope 86 289 -305 1 788 754 154 34 16 chrUextra 26678963 26679191 -2325465 + DNAREP1_DM LINE Penelope 143 332 -262 1 788 370 204 38 19 chrUextra 26679247 26679352 -2325304 - DNAREP1_DM LINE Penelope -303 291 185 1 788 4960 22 0 0 chrUextra 26679452 26680055 -2324601 + R1_DM LINE R1 2492 3094 -2262 1 788 5097 15 0 0 chrUextra 26680155 26680758 -2323898 - STALKER4_I LTR Gypsy -2309 4221 3619 1 788 4085 48 81 5 chrUextra 26680858 26681461 -2323195 + PROTOP DNA P 9 657 -3823 1 788 1637 15 0 5 chrUextra 26681565 26681772 -2322884 - NTS_DM Other Other -34 206 1 1 788 1421 20 20 20 chrUextra 26681772 26681975 -2322681 - NTS_DM Other Other 0 240 38 1 788 870 9 0 27 chrUextra 26681975 26682087 -2322569 - NTS_DM Other Other -107 133 25 1 788 21 36 0 0 chrUextra 26682113 26682141 -2322515 + AT_rich Low_complexity Low_complexity 1 28 0 1 788 1640 5 16 0 chrUextra 26682264 26682458 -2322198 - Invader1_LTR LTR Gypsy -226 197 1 1 788 3366 5 5 2 chrUextra 26682458 26682867 -2321789 - Invader1_I LTR Gypsy 0 3186 2777 1 788 621 339 40 26 chrUextra 26683706 26684160 -2320496 + NINJA_I LTR Pao 4839 5298 -713 1 788 479 122 100 0 chrUextra 26684713 26684803 -2319853 + DNAREP1_DM LINE Penelope 496 594 0 1 788 34 24 0 0 chrUextra 26684859 26684900 -2319756 + AT_rich Low_complexity Low_complexity 1 41 0 1 788 355 0 62 62 chrUextra 26685779 26685843 -2318813 + NTS_DM Other Other 177 240 0 1 788 1861 0 17 13 chrUextra 26685843 26686082 -2318574 + NTS_DM Other Other 1 240 0 1 788 1750 13 21 17 chrUextra 26686082 26686321 -2318335 + NTS_DM Other Other 1 240 0 1 788 539 0 0 0 chrUextra 26686321 26686382 -2318274 + NTS_DM Other Other 1 61 -179 1 788 1342 23 0 6 chrUextra 26686482 26686657 -2317999 - NTS_DM Other Other -66 174 1 1 788 1710 25 17 17 chrUextra 26686657 26686897 -2317759 - NTS_DM Other Other 0 240 1 1 788 1280 16 21 21 chrUextra 26686897 26687085 -2317571 - NTS_DM Other Other 0 240 53 1 788 3845 25 0 128 chrUextra 26687185 26687788 -2316868 + CIRCE LINE Composite 1657 2182 -4174 1 788 303 0 0 71 chrUextra 26687888 26687930 -2316726 - NTS_DM Other Other -177 63 25 1 788 1252 18 0 6 chrUextra 26687982 26688147 -2316509 - NTS_DM Other Other -39 201 38 1 788 840 9 0 35 chrUextra 26688147 26688260 -2316396 - NTS_DM Other Other -107 133 25 1 788 1168 25 6 12 chrUextra 26688312 26688477 -2316179 - NTS_DM Other Other -39 201 38 1 788 3802 10 151 0 chrUextra 26688591 26689194 -2315462 - DMRT1B LINE R1 -866 4317 3624 1 788 445 31 0 0 chrUextra 26689997 26690061 -2314595 + NTS_DM Other Other 113 176 -64 1 788 4741 2 0 0 chrUextra 26690058 26690600 -2314056 + G2_DM LINE Jockey 144 685 -2417 1 788 2438 195 7 12 chrUextra 26690702 26691303 -2313353 - SAR_DM Satellite Satellite -1093 597 1 1 788 552 15 0 0 chrUextra 26691941 26692006 -2312650 + (TTCTC)n Simple_repeat Simple_repeat 2 66 0 1 788 1896 172 3 8 chrUextra 26692106 26692165 -2312491 + SAR_DM Satellite Satellite 1 71 -1068 1 788 854 36 0 0 chrUextra 26692165 26692277 -2312379 - ARS406_DM Unknown Unknown -164 189 78 1 788 1896 172 3 8 chrUextra 26692277 26692703 -2311953 + SAR_DM Satellite Satellite 72 594 -545 1 788 618 0 0 0 chrUextra 26693512 26693582 -2311074 - NTS_DM Other Other -170 70 1 1 788 1847 4 17 13 chrUextra 26693582 26693821 -2310835 - NTS_DM Other Other 0 240 1 1 788 1824 0 21 13 chrUextra 26693821 26694059 -2310597 - NTS_DM Other Other 0 240 1 1 788 318 0 71 54 chrUextra 26694059 26694115 -2310541 - NTS_DM Other Other 0 240 184 1 788 1749 192 70 22 chrUextra 26694216 26694818 -2309838 - SAR_DM Satellite Satellite -879 630 1 1 788 5202 0 0 3 chrUextra 26694918 26695521 -2309135 + SSU-rRNA_Dme rRNA rRNA 549 1149 -846 1 788 880 63 5 18 chrUextra 26695621 26696224 -2308432 + RSP Satellite Satellite 1 595 0 1 788 2340 167 10 10 chrUextra 26696327 26696913 -2307743 - SAR_DM Satellite Satellite -581 586 1 1 788 2431 0 3 0 chrUextra 26697026 26697309 -2307347 - DM1731_I LTR Copia -3692 284 1 1 788 2576 31 0 0 chrUextra 26697309 26697628 -2307028 - DM1731_LTR LTR Copia 0 336 18 1 788 2497 64 90 6 chrUextra 26697728 26698193 -2306463 - TRANSIB2 DNA Transib -2333 511 8 1 788 761 108 131 0 chrUextra 26698200 26698330 -2306326 - MICROPIA_I LTR Gypsy -1027 3449 3303 1 788 1322 12 0 0 chrUextra 26698430 26698591 -2306065 - NTS_DM Other Other -79 161 1 1 788 1861 0 17 13 chrUextra 26698591 26698830 -2305826 - NTS_DM Other Other 0 240 1 1 788 1502 0 25 15 chrUextra 26698830 26699032 -2305624 - NTS_DM Other Other 0 240 37 1 788 435 38 0 0 chrUextra 26699136 26699189 -2305467 + (TTCTC)n Simple_repeat Simple_repeat 3 55 0 1 788 3610 5 0 0 chrUextra 26699834 26700252 -2304404 + QUASIMODO_LTR LTR Gypsy 241 658 0 1 788 1539 11 22 0 chrUextra 26700252 26700436 -2304220 + QUASIMODO_I LTR Gypsy 1 188 -5872 1 788 4522 2 0 0 chrUextra 26700536 26701056 -2303600 + LSU-rRNA_Dme rRNA rRNA 2113 2632 -1268 1 788 649 0 24 0 chrUextra 26701056 26701138 -2303518 + R1_DM LINE R1 1 84 -5272 1 788 4503 6 108 5 chrUextra 26701238 26701840 -2302816 - SSU-rRNA_Dme rRNA rRNA -495 1500 837 1 788 2057 102 10 89 chrUextra 26701940 26702536 -2302120 + DMSAT6 Satellite Satellite 1 549 -74 1 788 2433 104 24 3 chrUextra 26703353 26703944 -2300712 + DMSAT6 Satellite Satellite 1 602 -3 1 788 2296 90 37 13 chrUextra 26704046 26704644 -2300012 - DMSAT6 Satellite Satellite -11 611 1 1 788 2760 0 6 0 chrUextra 26704748 26705075 -2299581 - Stalker2_LTR LTR Gypsy -95 329 1 1 788 1705 12 19 34 chrUextra 26705075 26705342 -2299314 - Stalker2_I LTR Gypsy 0 7402 7140 1 788 756 0 0 0 chrUextra 26705450 26705534 -2299122 + (TTGTG)n Simple_repeat Simple_repeat 2 85 0 1 788 1192 7 0 0 chrUextra 26706152 26706294 -2298362 - NTS_DM Other Other -98 142 1 1 788 1531 0 20 15 chrUextra 26706294 26706496 -2298160 - NTS_DM Other Other 0 240 38 1 788 1062 8 0 15 chrUextra 26706496 26706631 -2298025 - NTS_DM Other Other -107 133 1 1 788 712 42 32 32 chrUextra 26706631 26706754 -2297902 - NTS_DM Other Other 0 240 118 1 788 510 171 0 9 chrUextra 26706854 26706966 -2297690 - ARS406_DM Unknown Unknown -242 111 1 1 788 2287 186 29 10 chrUextra 26706868 26707456 -2297200 + SAR_DM Satellite Satellite 191 789 -683 1 788 2684 174 12 7 chrUextra 26707556 26708158 -2296498 + SAR_DM Satellite Satellite 256 860 -612 1 788 4415 18 75 0 chrUextra 26708258 26708860 -2295796 - DMRT1B LINE R1 -2011 3172 2526 1 788 4713 25 18 0 chrUextra 26708960 26709562 -2295094 + STALKER4_I LTR Gypsy 2330 2942 -3588 1 788 5050 2 2 7 chrUextra 26709662 26710264 -2294392 - LSU-rRNA_Dme rRNA rRNA -2519 1381 783 1 788 577 142 59 6 chrUextra 26710370 26710540 -2294116 + GA-rich Low_complexity Low_complexity 1 179 0 1 788 513 7 136 0 chrUextra 26710528 26710682 -2293974 + (GA)n Simple_repeat Simple_repeat 2 176 0 1 788 2722 176 10 5 chrUextra 26711067 26711668 -2292988 + SAR_DM Satellite Satellite 267 870 -602 1 788 336 48 0 0 chrUextra 26711768 26711810 -2292846 + (TTCTC)n Simple_repeat Simple_repeat 3 44 0 1 788 2562 179 15 13 chrUextra 26712470 26713072 -2291584 + SAR_DM Satellite Satellite 267 869 -603 1 788 870 9 0 27 chrUextra 26713197 26713309 -2291347 - NTS_DM Other Other -107 133 25 1 788 1252 18 0 6 chrUextra 26713362 26713527 -2291129 - NTS_DM Other Other -39 201 38 1 788 870 9 0 27 chrUextra 26713527 26713639 -2291017 - NTS_DM Other Other -107 133 25 1 788 519 36 0 12 chrUextra 26713691 26713774 -2290882 - NTS_DM Other Other -39 201 120 1 788 426 20 0 0 chrUextra 26713881 26713931 -2290725 - LSU-rRNA_Dme rRNA rRNA -1211 2689 2640 1 788 4729 0 0 2 chrUextra 26713929 26714476 -2290180 - R1_DM LINE R1 0 5356 4811 1 788 2696 165 18 10 chrUextra 26714576 26715177 -2289479 - SAR_DM Satellite Satellite -515 957 352 1 788 633 93 0 0 chrUextra 26715278 26715385 -2289271 + (TCTTG)n Simple_repeat Simple_repeat 4 110 0 1 788 1158 122 0 0 chrUextra 26715980 26716204 -2288452 + (TA)n Simple_repeat Simple_repeat 1 224 0 1 788 4882 30 3 2 chrUextra 26716682 26717284 -2287372 - DIVER_I LTR Pao -95 5548 4946 1 788 2153 102 18 22 chrUextra 26717385 26717986 -2286670 - DMSAT6 Satellite Satellite -110 598 1 1 788 1416 187 15 3 chrUextra 26718099 26718687 -2285969 - SAR_DM Satellite Satellite -750 594 1 1 788 214 0 0 157 chrUextra 26719493 26719595 -2285061 + (CAAGA)n Simple_repeat Simple_repeat 2 87 0 1 788 662 200 6 19 chrUextra 26720403 26720561 -2284095 + HETRP_DM Satellite Satellite 1529 1684 -188 1 788 505 204 0 9 chrUextra 26720685 26720794 -2283862 + HETRP_DM Satellite Satellite 1529 1636 -236 1 788 2352 30 0 10 chrUextra 26720894 26721194 -2283462 - DM1731_LTR LTR Copia -39 297 1 1 788 2301 20 10 20 chrUextra 26721194 26721496 -2283160 - DM1731_I LTR Copia 0 3976 3678 1 788 2426 182 9 11 chrUextra 26721600 26722171 -2282485 + SAR_DM Satellite Satellite 507 1076 -396 1 788 5078 2 0 2 chrUextra 26722298 26722900 -2281756 + ROO_I LTR Pao 4837 5437 -2819 1 788 4254 19 0 4 chrUextra 26723001 26723517 -2281139 - PROTOP_A DNA P -591 514 1 1 788 4304 4 0 0 chrUextra 26723702 26724199 -2280457 - ROO_I LTR Pao -683 7573 7077 1 788 986 0 0 0 chrUextra 26724185 26724304 -2280352 - ROO_I LTR Pao -3752 4504 4386 1 788 2750 178 7 3 chrUextra 26724408 26725006 -2279650 + SAR_DM Satellite Satellite 246 845 -627 1 788 746 25 32 32 chrUextra 26725106 26725230 -2279426 + NTS_DM Other Other 117 240 0 1 788 1734 21 17 17 chrUextra 26725230 26725470 -2279186 + NTS_DM Other Other 1 240 0 1 788 1765 4 17 21 chrUextra 26725470 26725708 -2278948 + NTS_DM Other Other 1 237 -3 1 788 5121 0 0 3 chrUextra 26725808 26726410 -2278246 - R1_DM LINE R1 -2029 3327 2728 1 788 2218 122 12 15 chrUextra 26726511 26727104 -2277552 + DMSAT6 Satellite Satellite 1 591 -74 1 788 4962 8 0 2 chrUextra 26727212 26727813 -2276843 - ROO_I LTR Pao -4630 3626 3027 1 788 2011 188 8 14 chrUextra 26727913 26728405 -2276251 + SAR_DM Satellite Satellite 588 1076 -396 1 788 525 122 61 0 chrUextra 26728416 26728514 -2276142 + SAR_DM Satellite Satellite 543 646 -826 1 788 2828 174 5 5 chrUextra 26728614 26729215 -2275441 - SAR_DM Satellite Satellite -616 856 256 1 788 892 65 3 18 chrUextra 26729315 26729916 -2274740 - RSP Satellite Satellite -59 592 1 1 788 912 26 0 0 chrUextra 26730021 26730138 -2274518 - NTS_DM Other Other -86 154 38 1 788 870 9 0 27 chrUextra 26730138 26730250 -2274406 - NTS_DM Other Other -107 133 25 1 788 22 56 0 0 chrUextra 26730276 26730312 -2274344 + AT_rich Low_complexity Low_complexity 1 36 0 1 788 255 125 0 0 chrUextra 26730325 26730365 -2274291 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 788 246 150 0 0 chrUextra 26730408 26730448 -2274208 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 788 246 150 0 0 chrUextra 26730500 26730540 -2274116 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 788 525 71 0 0 chrUextra 26731248 26731318 -2273338 + (GAGAA)n Simple_repeat Simple_repeat 5 74 0 1 788 3010 258 11 29 chrUextra 26731418 26732554 -2272102 - SAR_DM Satellite Satellite -357 1277 61 1 788 822 54 0 0 chrUextra 26732554 26732666 -2271990 + ARS406_DM Unknown Unknown 78 189 -164 1 788 3010 258 11 29 chrUextra 26732666 26732720 -2271936 - SAR_DM Satellite Satellite -357 60 1 1 788 583 136 0 18 chrUextra 26732820 26732932 -2271724 + SAR_DM Satellite Satellite 794 903 -569 1 788 796 30 0 0 chrUextra 26732842 26732942 -2271714 - ARS406_DM Unknown Unknown -164 189 90 1 788 1987 183 5 7 chrUextra 26732947 26733393 -2271263 + SAR_DM Satellite Satellite 496 940 -532 1 788 383 68 17 0 chrUextra 26733528 26733587 -2271069 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 788 1843 105 10 3 chrUextra 26733599 26733887 -2270769 + MDG1_LTR LTR Gypsy 123 412 -30 1 788 1635 43 17 13 chrUextra 26733888 26734122 -2270534 + DMCR1A LINE CR1 1 235 -4235 1 788 2714 160 17 13 chrUextra 26734223 26734823 -2269833 + SAR_DM Satellite Satellite 370 971 -501 1 788 2456 117 25 25 chrUextra 26734924 26735524 -2269132 - DMSAT6 Satellite Satellite -30 600 1 1 788 5015 20 0 0 chrUextra 26735624 26736225 -2268431 - DMRT1B LINE R1 -2718 2465 1865 1 788 4819 22 3 0 chrUextra 26736325 26736926 -2267730 + G_DM LINE Jockey 3295 3897 -449 1 788 2594 169 28 5 chrUextra 26737036 26737612 -2267044 - SAR_DM Satellite Satellite -535 937 349 1 788 2486 82 12 25 chrUextra 26737727 26738325 -2266331 + DMSAT6 Satellite Satellite 1 589 -74 1 98 1363 258 19 78 chrUextra 26738431 26739007 -2265649 + Gypsy12_LTR LTR Gypsy 355 896 -1440 1 789 2295 98 7 52 chrUextra 26739830 26740431 -2264225 + DMSAT6 Satellite Satellite 1 573 -100 1 789 2703 174 10 7 chrUextra 26740531 26741132 -2263524 + SAR_DM Satellite Satellite 415 1017 -455 1 789 4007 2 0 2 chrUextra 26742074 26742534 -2262122 + SSU-rRNA_Dme rRNA rRNA 1 459 -1536 1 789 4437 2 3 77 chrUextra 26742634 26743235 -2261421 - LSU-rRNA_Dme rRNA rRNA -1824 2076 1520 1 789 5245 0 3 0 chrUextra 26743335 26743936 -2260720 + LSU-rRNA_Dme rRNA rRNA 3070 3672 -228 1 789 3960 11 6 10 chrUextra 26744037 26744519 -2260137 + DM1731_I LTR Copia 3497 3976 0 1 789 841 44 0 34 chrUextra 26744519 26744637 -2260019 + DM1731_LTR LTR Copia 29 142 -194 1 789 972 0 0 0 chrUextra 26744737 26744845 -2259811 + (CATCT)n Simple_repeat Simple_repeat 1 108 0 1 789 1491 28 0 0 chrUextra 26744847 26745027 -2259629 + (CATGT)n Simple_repeat Simple_repeat 1 180 0 1 789 585 0 0 0 chrUextra 26745027 26745092 -2259564 + (CATCT)n Simple_repeat Simple_repeat 1 65 0 1 789 1224 53 0 0 chrUextra 26745092 26745338 -2259318 + (CATGT)n Simple_repeat Simple_repeat 1 246 0 1 789 2519 173 10 13 chrUextra 26745438 26746037 -2258619 - SAR_DM Satellite Satellite -671 801 205 1 789 5211 2 2 0 chrUextra 26746139 26746740 -2257916 - LSU-rRNA_Dme rRNA rRNA -1470 2430 1829 1 789 2637 168 15 10 chrUextra 26746840 26747441 -2257215 - SAR_DM Satellite Satellite -496 976 373 1 789 1116 0 0 0 chrUextra 26748242 26748366 -2256290 + (CACAA)n Simple_repeat Simple_repeat 3 126 0 1 789 3420 5 0 2 chrUextra 26748370 26748773 -2255883 - STALKER4_LTR LTR Gypsy 0 402 1 1 789 580 0 0 0 chrUextra 26748773 26748843 -2255813 - STALKER4_I LTR Gypsy 0 6530 6461 1 789 2773 166 7 7 chrUextra 26748946 26749536 -2255120 + SAR_DM Satellite Satellite 369 958 -514 1 789 246 150 0 0 chrUextra 26749727 26749767 -2254889 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 789 225 125 0 24 chrUextra 26749810 26749851 -2254805 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 789 22 56 0 0 chrUextra 26749864 26749900 -2254756 + AT_rich Low_complexity Low_complexity 1 36 0 1 789 848 18 0 27 chrUextra 26749926 26750038 -2254618 + NTS_DM Other Other 25 133 -107 1 789 1182 30 0 12 chrUextra 26750038 26750204 -2254452 + NTS_DM Other Other 38 201 -39 1 789 2514 174 12 14 chrUextra 26750348 26750938 -2253718 - SAR_DM Satellite Satellite -425 1047 459 1 789 1608 179 32 12 chrUextra 26751046 26751647 -2253009 + SAR_DM Satellite Satellite 1 613 -426 1 789 2675 175 8 10 chrUextra 26751747 26752348 -2252308 + SAR_DM Satellite Satellite 438 1037 -435 1 789 3207 48 24 0 chrUextra 26752449 26752869 -2251787 + TART_B1 LINE telomeric 3199 3628 -7026 1 789 1331 88 0 0 chrUextra 26752867 26753049 -2251607 + TART_B1 LINE telomeric 4415 4596 -6058 1 789 5029 2 0 0 chrUextra 26753149 26753750 -2250906 - LSU-rRNA_Dme rRNA rRNA -2956 944 344 1 789 2479 166 18 20 chrUextra 26753850 26754451 -2250205 - SAR_DM Satellite Satellite -673 799 200 1 789 2099 47 0 4 chrUextra 26755252 26755533 -2249123 - HETA LINE telomeric -2473 3608 3329 1 789 2433 28 6 3 chrUextra 26755535 26755853 -2248803 + NINJA_I LTR Pao 5579 5897 -114 1 789 1107 0 0 0 chrUextra 26755960 26756083 -2248573 + (CAGAT)n Simple_repeat Simple_repeat 5 127 0 1 789 1467 28 0 0 chrUextra 26756085 26756265 -2248391 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 789 555 148 0 0 chrUextra 26756265 26756400 -2248256 + (CTAAG)n Simple_repeat Simple_repeat 1 135 0 1 789 633 184 0 0 chrUextra 26756372 26756535 -2248121 + A-rich Low_complexity Low_complexity 4 166 0 1 789 1587 14 0 0 chrUextra 26756656 26756936 -2247720 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 789 5149 3 2 0 chrUextra 26758054 26758654 -2246002 - R1_DM LINE R1 -2973 2383 1783 1 789 32 0 0 0 chrUextra 26758888 26758920 -2245736 + AT_rich Low_complexity Low_complexity 1 32 0 1 789 2570 10 3 0 chrUextra 26759052 26759354 -2245302 + SSU-rRNA_Dme rRNA rRNA 1 303 -1692 1 789 5156 2 2 3 chrUextra 26759454 26760054 -2244602 + SSU-rRNA_Dme rRNA rRNA 750 1348 -647 1 789 2490 183 5 19 chrUextra 26760155 26760744 -2243912 + SAR_DM Satellite Satellite 539 1119 -353 1 789 1961 187 4 11 chrUextra 26760854 26761319 -2243337 - SAR_DM Satellite Satellite -515 957 496 1 789 657 53 53 0 chrUextra 26761324 26761419 -2243237 + ARS406_DM Unknown Unknown 90 189 -164 1 789 544 152 42 17 chrUextra 26761334 26761454 -2243202 - SAR_DM Satellite Satellite -569 903 781 1 789 5263 3 0 0 chrUextra 26761554 26762154 -2242502 - SSU-rRNA_Dme rRNA rRNA -1203 792 193 1 789 579 8 128 3 chrUextra 26762954 26763551 -2241105 + (TA)n Simple_repeat Simple_repeat 1 671 0 1 789 3400 76 17 24 chrUextra 26763654 26764254 -2240402 + PROTOP_A DNA P 481 1075 -78 1 789 5132 2 0 0 chrUextra 26764354 26764954 -2239702 - R1_DM LINE R1 -2192 3164 2565 1 789 2367 89 28 19 chrUextra 26765081 26765654 -2239002 - DMSAT6 Satellite Satellite 0 578 1 1 789 2650 170 12 8 chrUextra 26765754 26766341 -2238315 - SAR_DM Satellite Satellite -515 957 369 1 789 1149 13 0 0 chrUextra 26767154 26767313 -2237343 + DOC LINE Jockey 4567 4725 0 1 789 3759 2 0 0 chrUextra 26767314 26767754 -2236902 - Invader3_I LTR Gypsy -1798 3090 2651 1 789 2657 180 8 7 chrUextra 26767854 26768453 -2236203 + SAR_DM Satellite Satellite 253 852 -620 1 789 5149 3 0 0 chrUextra 26768554 26769154 -2235502 + R1_DM LINE R1 2918 3517 -1839 1 789 391 49 0 16 chrUextra 26769257 26769319 -2235337 + NTS_DM Other Other 141 201 -39 1 789 21 57 0 0 chrUextra 26769319 26769354 -2235302 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 832 9 9 27 chrUextra 26769380 26769491 -2235165 + NTS_DM Other Other 25 133 -107 1 789 817 0 0 0 chrUextra 26769491 26769587 -2235069 + NTS_DM Other Other 38 133 -107 1 789 1408 20 20 20 chrUextra 26769587 26769790 -2234866 + NTS_DM Other Other 38 240 0 1 789 524 31 0 0 chrUextra 26769790 26769854 -2234802 + NTS_DM Other Other 1 64 -176 1 789 5096 5 0 2 chrUextra 26769954 26770554 -2234102 - R1_DM LINE R1 -2988 2368 1770 1 789 4262 11 2 2 chrUextra 26771354 26771874 -2232782 - R1_DM LINE R1 -4060 1296 777 1 789 626 25 0 0 chrUextra 26771873 26771953 -2232703 - R1_DM LINE R1 -4838 518 439 1 789 922 9 9 0 chrUextra 26772754 26772868 -2231788 - R1_DM LINE R1 -5240 116 2 1 789 455 36 0 0 chrUextra 26772870 26772925 -2231731 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 789 3761 0 0 2 chrUextra 26772921 26773354 -2231302 - R2_DM LINE R2 0 3607 3176 1 789 5138 5 0 0 chrUextra 26773454 26774054 -2230602 - R1_DM LINE R1 -251 5105 4506 1 789 2289 194 15 8 chrUextra 26774165 26774754 -2229902 - SAR_DM Satellite Satellite -416 1056 464 1 789 1118 149 9 39 chrUextra 26774855 26775086 -2229570 - Gypsy12_LTR LTR Gypsy -2112 224 1 1 789 2723 79 0 3 chrUextra 26775085 26775454 -2229202 - Gypsy12_I LTR Gypsy 0 5546 5179 1 789 1323 0 0 0 chrUextra 26775554 26775701 -2228955 + (GAGAA)n Simple_repeat Simple_repeat 4 150 0 1 789 180 0 0 0 chrUextra 26776254 26776274 -2228382 + (T)n Simple_repeat Simple_repeat 1 20 0 1 789 264 276 10 0 chrUextra 26776298 26776396 -2228260 + MAX_I LTR Pao 1066 1164 -6750 1 789 835 148 84 165 chrUextra 26776396 26776850 -2227806 + MAX_I LTR Pao 938 1354 -6560 1 789 1252 6 13 0 chrUextra 26776954 26777111 -2227545 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1582 1 789 3800 2 2 5 chrUextra 26777107 26777554 -2227102 - LSU-rRNA_Dme rRNA rRNA -2420 1480 1035 1 789 4947 9 0 0 chrUextra 26777654 26778193 -2226463 - DOC LINE Jockey -4185 540 2 1 789 4516 58 2 20 chrUextra 26778354 26778954 -2225702 + R1_DM LINE R1 206 794 -4562 1 789 817 11 0 0 chrUextra 26779054 26779146 -2225510 - MAX_LTR LTR Pao -229 92 1 1 789 3988 48 0 0 chrUextra 26779155 26779654 -2225002 - MAX_I LTR Pao -2 7912 7414 1 789 5349 18 2 0 chrUextra 26779757 26780354 -2224302 + STALKER4_I LTR Gypsy 4048 4645 -1885 1 789 5337 13 0 2 chrUextra 26780454 26781054 -2223602 + STALKER4_I LTR Gypsy 4478 5076 -1454 1 789 471 35 0 0 chrUextra 26781697 26781754 -2222902 + (GAGAA)n Simple_repeat Simple_repeat 5 61 0 1 789 2701 77 10 27 chrUextra 26781860 26782450 -2222206 + DMSAT6 Satellite Satellite 1 579 -97 1 789 5560 2 2 2 chrUextra 26782554 26783154 -2221502 - SSU-rRNA_Dme rRNA rRNA -1241 754 155 1 789 698 304 52 49 chrUextra 26783254 26783846 -2220810 - SAR_DM Satellite Satellite -454 1018 425 1 789 590 328 18 8 chrUextra 26783957 26784284 -2220372 + Copia2_I LTR Copia 1746 2091 -2071 1 789 3880 103 68 0 chrUextra 26784654 26785254 -2219402 - TART_B1 LINE telomeric -7723 2931 2291 1 789 4417 64 7 13 chrUextra 26785354 26785954 -2218702 - BATUMI_I LTR Pao -4259 3704 3109 1 789 5451 5 0 0 chrUextra 26786054 26786654 -2218002 - R1_DM LINE R1 -78 5278 4679 1 789 3048 169 12 7 chrUextra 26787454 26788054 -2216602 + SAR_DM Satellite Satellite 260 862 -610 1 789 680 300 58 60 chrUextra 26788185 26788753 -2215903 - SAR_DM Satellite Satellite -449 1023 457 1 789 2500 110 17 24 chrUextra 26789555 26790132 -2214524 - DMSAT6 Satellite Satellite -67 573 1 1 789 430 182 46 35 chrUextra 26790254 26790452 -2214204 - HETA LINE telomeric -10285 178 1 1 789 658 58 23 0 chrUextra 26790465 26790541 -2214115 - HETA LINE telomeric -5 6076 5999 1 789 2626 32 35 0 chrUextra 26790541 26790854 -2213802 + DM1731_LTR LTR Copia 1 324 -12 1 789 5178 18 3 0 chrUextra 26790954 26791554 -2213102 - STALKER4_I LTR Gypsy -3396 3134 2533 1 789 2989 161 9 9 chrUextra 26791667 26792245 -2212411 + SAR_DM Satellite Satellite 326 903 -569 1 789 306 245 119 0 chrUextra 26792367 26792495 -2212161 + HETA LINE telomeric 4491 4567 -1514 1 789 1268 244 42 28 chrUextra 26792526 26792951 -2211705 + G_DM LINE Jockey 421 851 -3495 1 789 584 0 49 37 chrUextra 26793052 26793134 -2211522 + NTS_DM Other Other 158 240 0 1 789 1341 6 0 30 chrUextra 26793134 26793301 -2211355 + NTS_DM Other Other 1 162 -78 1 789 534 119 36 0 chrUextra 26793411 26793495 -2211161 + NTS_DM Other Other 4 90 -150 1 789 2162 135 20 14 chrUextra 26793751 26794348 -2210308 - DMSAT6 Satellite Satellite -365 601 1 1 789 2212 28 12 0 chrUextra 26794794 26795049 -2209607 - PROTOP DNA P 0 4480 4223 1 789 2015 38 188 7 chrUextra 26795149 26795441 -2209215 - DOC2_DM LINE Jockey -4442 351 7 1 789 1600 143 13 13 chrUextra 26795450 26795748 -2208908 + SAR_DM Satellite Satellite 740 1037 -435 1 789 1128 172 19 9 chrUextra 26795848 26796116 -2208540 - HETA LINE telomeric -1422 4659 4464 1 789 2544 70 3 3 chrUextra 26796074 26796447 -2208209 - G6_DM LINE Jockey 0 2042 1739 1 789 2529 192 10 22 chrUextra 26796555 26797146 -2207510 + SAR_DM Satellite Satellite 536 1119 -353 1 789 6255 242 56 65 chrUextra 26797246 26799243 -2205413 + STALKER4_I LTR Gypsy 392 2485 -4045 1 789 2458 191 55 5 chrUextra 26799363 26799941 -2204715 + SAR_DM Satellite Satellite 373 979 -493 1 789 534 119 36 0 chrUextra 26800132 26800216 -2204440 + NTS_DM Other Other 4 90 -150 1 789 28 48 0 0 chrUextra 26800490 26800532 -2204124 + AT_rich Low_complexity Low_complexity 1 42 0 1 789 5016 24 2 7 chrUextra 26800741 26801340 -2203316 + R1_DM LINE R1 3387 3982 -1374 1 789 2681 185 13 12 chrUextra 26802139 26802735 -2201921 - SAR_DM Satellite Satellite -684 788 192 1 789 3020 164 19 7 chrUextra 26802838 26803423 -2201233 - SAR_DM Satellite Satellite -549 923 332 1 789 21 36 0 0 chrUextra 26803539 26803567 -2201089 + AT_rich Low_complexity Low_complexity 1 28 0 1 789 876 9 0 44 chrUextra 26803593 26803707 -2200949 + NTS_DM Other Other 25 133 -107 1 789 1350 18 0 6 chrUextra 26803707 26803872 -2200784 + NTS_DM Other Other 38 201 -39 1 789 21 57 0 0 chrUextra 26803872 26803907 -2200749 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 898 9 9 27 chrUextra 26803933 26804044 -2200612 + NTS_DM Other Other 25 133 -107 1 789 844 0 0 0 chrUextra 26804044 26804136 -2200520 + NTS_DM Other Other 38 129 -111 1 789 4966 37 5 3 chrUextra 26804236 26804835 -2199821 - R1_DM LINE R1 -182 5174 4575 1 789 4935 12 0 0 chrUextra 26804935 26805534 -2199122 + DM176_I LTR Gypsy 5642 6240 -180 1 789 3013 175 5 5 chrUextra 26806340 26806932 -2197724 + SAR_DM Satellite Satellite 278 869 -603 1 789 2489 91 19 35 chrUextra 26807032 26807623 -2197033 - DMSAT6 Satellite Satellite -71 581 1 1 789 4163 100 47 0 chrUextra 26807731 26808330 -2196326 - TART_B1 LINE telomeric -7618 3036 2410 1 789 1938 8 17 17 chrUextra 26808446 26808686 -2195970 - NTS_DM Other Other 0 240 1 1 789 1878 21 17 17 chrUextra 26808686 26808926 -2195730 - NTS_DM Other Other 0 240 1 1 789 672 20 39 39 chrUextra 26808926 26809029 -2195627 - NTS_DM Other Other 0 240 138 1 789 24 0 0 0 chrUextra 26809222 26809246 -2195410 + AT_rich Low_complexity Low_complexity 1 24 0 1 789 426 197 0 0 chrUextra 26809520 26809591 -2195065 - HETA LINE telomeric -1478 4603 4533 1 789 3864 43 60 54 chrUextra 26809831 26810427 -2194229 - PROTOP_A DNA P -329 776 177 1 789 2559 72 9 91 chrUextra 26810544 26811126 -2193530 - DMSAT6 Satellite Satellite 0 533 1 1 789 470 220 19 55 chrUextra 26811233 26811763 -2192893 + GA-rich Low_complexity Low_complexity 1 510 0 1 789 308 0 0 0 chrUextra 26811925 26811959 -2192697 - LSU-rRNA_Dme rRNA rRNA -2079 1821 1788 1 789 4624 4 6 6 chrUextra 26811999 26812524 -2192132 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1267 1 789 2329 105 52 19 chrUextra 26812636 26813223 -2191433 - DMSAT6 Satellite Satellite -3 606 1 1 789 443 36 0 0 chrUextra 26813323 26813379 -2191277 + ARS406_DM Unknown Unknown 104 159 -194 1 789 1867 180 25 9 chrUextra 26813388 26813800 -2190856 - SAR_DM Satellite Satellite -572 540 41 1 789 654 56 56 0 chrUextra 26813800 26813889 -2190767 + ARS406_DM Unknown Unknown 96 189 -164 1 789 1867 180 25 9 chrUextra 26813889 26813920 -2190736 - SAR_DM Satellite Satellite -572 40 1 1 789 4890 34 17 2 chrUextra 26814022 26814621 -2190035 + R1_DM LINE R1 656 1263 -4093 1 789 2451 103 7 43 chrUextra 26814743 26815320 -2189336 + DMSAT6 Satellite Satellite 1 555 0 1 789 3102 162 22 5 chrUextra 26815420 26816017 -2188639 - SAR_DM Satellite Satellite -594 878 272 1 789 28 48 0 0 chrUextra 26816275 26816317 -2188339 + AT_rich Low_complexity Low_complexity 1 42 0 1 789 3334 3 0 0 chrUextra 26816355 26816718 -2187938 - NOMAD_LTR LTR Gypsy 0 518 156 1 789 34 24 0 0 chrUextra 26816962 26817003 -2187653 + AT_rich Low_complexity Low_complexity 1 41 0 1 789 683 13 0 0 chrUextra 26817517 26817592 -2187064 + LSU-rRNA_Dme rRNA rRNA 2582 2656 -1244 1 789 4812 2 0 0 chrUextra 26817589 26818116 -2186540 + R1_DM LINE R1 3231 3757 -1599 1 789 3011 160 12 13 chrUextra 26818219 26818815 -2185841 + SAR_DM Satellite Satellite 332 926 -546 1 789 5293 5 2 3 chrUextra 26818915 26819514 -2185142 + R1_DM LINE R1 3358 3955 -1401 1 789 2390 90 7 35 chrUextra 26819615 26820213 -2184443 + DMSAT6 Satellite Satellite 1 581 -124 1 789 4832 2 0 0 chrUextra 26820313 26820833 -2183823 + LSU-rRNA_Dme rRNA rRNA 2113 2632 -1268 1 789 677 13 13 0 chrUextra 26820833 26820912 -2183744 + R1_DM LINE R1 1 80 -5276 1 789 644 312 27 23 chrUextra 26821012 26821485 -2183171 - Gypsy4_I LTR Gypsy -3804 3208 2320 1 789 2990 156 20 12 chrUextra 26821719 26822303 -2182353 + SAR_DM Satellite Satellite 370 958 -514 1 789 2581 193 8 20 chrUextra 26822411 26823009 -2181647 + SAR_DM Satellite Satellite 511 1101 -371 1 789 1188 270 40 32 chrUextra 26823115 26823708 -2180948 - SAR_DM Satellite Satellite -581 891 294 1 789 2958 171 10 12 chrUextra 26823808 26824407 -2180249 - SAR_DM Satellite Satellite -638 834 237 1 789 5572 0 0 2 chrUextra 26825206 26825805 -2178851 + LSU-rRNA_Dme rRNA rRNA 2712 3309 -591 1 789 2861 166 20 25 chrUextra 26825905 26826503 -2178153 + SAR_DM Satellite Satellite 256 850 -622 1 789 4004 63 12 12 chrUextra 26826603 26827201 -2177455 + FB4_DM DNA Tc1 2839 3436 -653 1 789 3691 5 0 0 chrUextra 26827301 26827698 -2176958 - SSU-rRNA_Dme rRNA rRNA -1598 397 1 1 789 32 0 0 0 chrUextra 26827830 26827862 -2176794 + AT_rich Low_complexity Low_complexity 1 32 0 1 789 1620 42 0 0 chrUextra 26828003 26828359 -2176297 + (CTTAT)n Simple_repeat Simple_repeat 1 356 0 1 789 1587 9 0 0 chrUextra 26828374 26828597 -2176059 + (CTTAT)n Simple_repeat Simple_repeat 1 223 0 1 789 688 327 33 10 chrUextra 26828849 26829249 -2175407 - GTWIN_I LTR Gypsy -2883 3538 3147 1 789 562 57 0 0 chrUextra 26829395 26829465 -2175191 - NTS_DM Other Other -170 70 1 1 789 1526 20 20 20 chrUextra 26829465 26829668 -2174988 - NTS_DM Other Other 0 240 38 1 789 898 9 9 27 chrUextra 26829668 26829779 -2174877 - NTS_DM Other Other -107 133 25 1 789 21 57 0 0 chrUextra 26829805 26829840 -2174816 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 1200 26 0 7 chrUextra 26829840 26829993 -2174663 - NTS_DM Other Other -39 201 50 1 789 2969 188 7 3 chrUextra 26830093 26830691 -2173965 + SAR_DM Satellite Satellite 275 874 -598 1 789 1262 20 0 20 chrUextra 26831489 26831638 -2173018 - DOC2_DM LINE Jockey -4638 155 10 1 789 3008 12 0 0 chrUextra 26831750 26832087 -2172569 - DOC2_DM LINE Jockey 0 4793 4457 1 789 4410 4 2 0 chrUextra 26832187 26832663 -2171993 - SSU-rRNA_Dme rRNA rRNA -1518 477 1 1 789 5458 5 0 2 chrUextra 26832885 26833483 -2171173 + R1_DM LINE R1 4615 5211 -145 1 789 1777 0 0 0 chrUextra 26833583 26833772 -2170884 - LSU-rRNA_Dme rRNA rRNA -1924 1976 1788 1 789 3285 3 5 3 chrUextra 26833813 26834181 -2170475 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1423 1 789 325 207 24 35 chrUextra 26834288 26834373 -2170283 + HETRP_DM Satellite Satellite 1601 1684 -188 1 789 718 185 17 58 chrUextra 26834502 26834674 -2169982 + HETRP_DM Satellite Satellite 1518 1682 -190 1 789 414 107 0 0 chrUextra 26834823 26834879 -2169777 + HETRP_DM Satellite Satellite 1529 1584 -288 1 789 5480 2 2 3 chrUextra 26835677 26836275 -2168381 - SSU-rRNA_Dme rRNA rRNA -456 1539 943 1 789 2915 169 13 10 chrUextra 26836375 26836973 -2167683 - SAR_DM Satellite Satellite -443 1029 430 1 789 3484 5 3 0 chrUextra 26837073 26837451 -2167205 + SSU-rRNA_Dme rRNA rRNA 1617 1995 0 1 789 5331 17 0 0 chrUextra 26837778 26838369 -2166287 - Gypsy4_I LTR Gypsy -3355 2933 2343 1 789 773 0 12 0 chrUextra 26838469 26838555 -2166101 + LSU-rRNA_Dme rRNA rRNA 3814 3900 0 1 789 266 196 0 19 chrUextra 26838656 26838708 -2165948 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 266 196 0 19 chrUextra 26838748 26838800 -2165856 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 266 196 0 19 chrUextra 26838840 26838892 -2165764 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 1096 8 0 0 chrUextra 26838944 26839067 -2165589 + LSU-rRNA_Dme rRNA rRNA 2191 2313 -1587 1 789 1450 22 6 0 chrUextra 26839167 26839347 -2165309 - BATUMI_I LTR Pao -478 7485 7305 1 789 3170 29 8 8 chrUextra 26839372 26839760 -2164896 + BATUMI_I LTR Pao 6427 6814 -1149 1 789 25 0 0 0 chrUextra 26839888 26839913 -2164743 + AT_rich Low_complexity Low_complexity 1 25 0 1 789 266 196 0 19 chrUextra 26839915 26839967 -2164689 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 283 176 0 19 chrUextra 26840007 26840059 -2164597 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 22 56 0 0 chrUextra 26840072 26840108 -2164548 + AT_rich Low_complexity Low_complexity 1 36 0 1 789 928 9 0 27 chrUextra 26840134 26840246 -2164410 + NTS_DM Other Other 25 133 -107 1 789 559 13 0 62 chrUextra 26840249 26840329 -2164327 + NTS_DM Other Other 59 133 -107 1 789 737 52 0 10 chrUextra 26840329 26840410 -2164246 + NTS_DM Other Other 38 118 -122 1 789 239 54 0 26 chrUextra 26840410 26840448 -2164208 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 789 737 52 0 10 chrUextra 26840448 26840463 -2164193 + NTS_DM Other Other 119 133 -107 1 789 2920 168 5 7 chrUextra 26840563 26841140 -2163516 - SAR_DM Satellite Satellite -571 901 326 1 789 5092 25 2 5 chrUextra 26841261 26841859 -2162797 + R1_DM LINE R1 3387 3982 -1374 1 789 558 0 0 0 chrUextra 26842495 26842557 -2162099 + (TTCTC)n Simple_repeat Simple_repeat 2 63 0 1 789 335 89 0 18 chrUextra 26842678 26842687 -2161969 + (AATAG)n Simple_repeat Simple_repeat 2 10 0 1 789 1515 28 0 0 chrUextra 26842687 26842867 -2161789 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 1 789 1611 32 0 2 chrUextra 26842867 26843255 -2161401 + (AATAG)n Simple_repeat Simple_repeat 1 387 0 1 789 558 0 0 0 chrUextra 26843355 26843417 -2161239 + (CAAAA)n Simple_repeat Simple_repeat 5 66 0 1 789 1620 6 0 0 chrUextra 26844317 26844651 -2160005 + (TTCTC)n Simple_repeat Simple_repeat 1 334 0 1 789 2428 155 22 84 chrUextra 26844751 26845349 -2159307 + SAR_DM Satellite Satellite 529 1089 -383 1 789 2504 103 14 24 chrUextra 26845453 26846047 -2158609 - DMSAT6 Satellite Satellite -3 588 1 1 789 5209 25 10 0 chrUextra 26846147 26846745 -2157911 - FW_DM LINE Jockey -1882 2810 2207 1 789 1545 5 5 0 chrUextra 26846845 26847031 -2157625 + TART_B1 LINE telomeric 10343 10529 -125 1 789 2366 163 2 2 chrUextra 26847032 26847443 -2157213 + HETA LINE telomeric 2890 3300 -2781 1 789 1041 96 0 0 chrUextra 26847547 26847905 -2156751 + (ACATG)n Simple_repeat Simple_repeat 1 358 0 1 789 1406 59 11 0 chrUextra 26848247 26848434 -2156222 + TART LINE telomeric 10476 10664 -3813 1 789 1117 165 57 70 chrUextra 26848453 26848837 -2155819 + HETA LINE telomeric 1 379 -5702 1 789 2506 118 12 14 chrUextra 26848940 26849535 -2155121 + DMSAT6 Satellite Satellite 1 593 -85 1 789 2800 184 12 8 chrUextra 26849637 26850234 -2154422 + SAR_DM Satellite Satellite 410 1008 -464 1 789 1012 76 0 0 chrUextra 26850335 26850479 -2154177 - ARS406_DM Unknown Unknown -206 147 4 1 789 2120 179 11 5 chrUextra 26850490 26850933 -2153723 + SAR_DM Satellite Satellite 326 771 -701 1 789 5304 12 5 2 chrUextra 26851033 26851631 -2153025 + R1_DM LINE R1 3647 4246 -1110 1 789 459 0 0 0 chrUextra 26851731 26851782 -2152874 + (TTCTC)n Simple_repeat Simple_repeat 5 55 0 1 789 207 0 0 0 chrUextra 26851784 26851807 -2152849 + (AGCTG)n Simple_repeat Simple_repeat 2 24 0 1 789 1620 6 0 0 chrUextra 26851807 26852327 -2152329 + (GAGAA)n Simple_repeat Simple_repeat 1 520 0 1 789 3987 23 37 4 chrUextra 26852435 26852921 -2151735 + IDEFIX_LTR LTR Gypsy 93 594 0 1 789 681 123 0 0 chrUextra 26853127 26853233 -2151423 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 789 3605 5 7 7 chrUextra 26853233 26853647 -2151009 - DM297_LTR LTR Gypsy 0 414 1 1 789 708 13 0 0 chrUextra 26853647 26853725 -2150931 - DM297_I LTR Gypsy 0 6167 6090 1 789 225 0 95 71 chrUextra 26853825 26853867 -2150789 + NTS_DM Other Other 198 240 0 1 789 1972 4 17 13 chrUextra 26853867 26854106 -2150550 + NTS_DM Other Other 1 240 0 1 789 1367 12 0 18 chrUextra 26854106 26854271 -2150385 + NTS_DM Other Other 1 162 -78 1 789 310 71 0 0 chrUextra 26854381 26854423 -2150233 + NTS_DM Other Other 4 45 -195 1 789 687 0 13 0 chrUextra 26854523 26854601 -2150055 + ROO_I LTR Pao 8178 8256 0 1 789 4017 0 0 0 chrUextra 26854601 26855029 -2149627 + ROO_LTR LTR Pao 1 428 0 1 789 835 0 0 0 chrUextra 26855029 26855121 -2149535 + R1_DM LINE R1 4921 5012 -344 1 789 5364 0 2 5 chrUextra 26855221 26855819 -2148837 + R1_DM LINE R1 932 1527 -3829 1 789 347 26 0 0 chrUextra 26855919 26855958 -2148698 - NTS_DM Other Other -201 39 1 1 789 1520 25 20 20 chrUextra 26855958 26856161 -2148495 - NTS_DM Other Other 0 240 38 1 789 928 9 0 27 chrUextra 26856161 26856273 -2148383 - NTS_DM Other Other -107 133 25 1 789 21 57 0 0 chrUextra 26856299 26856334 -2148322 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 1332 18 0 6 chrUextra 26856334 26856499 -2148157 - NTS_DM Other Other -39 201 38 1 789 2795 180 8 7 chrUextra 26856621 26857208 -2147448 - SAR_DM Satellite Satellite -514 958 371 1 789 3861 244 22 38 chrUextra 26857314 26858603 -2146053 + SAR_DM Satellite Satellite 1 1267 -225 1 789 384 22 0 0 chrUextra 26858707 26858752 -2145904 + (TTCTC)n Simple_repeat Simple_repeat 1 45 0 1 789 5532 0 0 3 chrUextra 26859404 26860001 -2144655 - LSU-rRNA_Dme rRNA rRNA -455 3445 2851 1 789 4776 62 17 2 chrUextra 26860101 26860698 -2143958 - TART_B1 LINE telomeric -7129 3525 2920 1 789 1918 194 9 13 chrUextra 26861495 26861558 -2143098 - SAR_DM Satellite Satellite -730 595 468 1 789 925 201 169 16 chrUextra 26861558 26861866 -2142790 + XDMR_DM Unknown Unknown 6 360 0 1 789 1918 194 9 13 chrUextra 26861866 26862092 -2142564 - SAR_DM Satellite Satellite -730 467 1 1 789 3013 164 10 7 chrUextra 26862890 26863486 -2141170 - SAR_DM Satellite Satellite -533 939 342 1 789 3565 0 0 0 chrUextra 26863586 26863967 -2140689 + DMRT1B LINE R1 4803 5183 0 1 789 986 76 7 20 chrUextra 26864286 26864877 -2139779 - RSP Satellite Satellite -54 583 1 1 789 1788 195 68 24 chrUextra 26865677 26866273 -2138383 + SAR_DM Satellite Satellite 1 622 -432 1 789 1541 6 0 0 chrUextra 26866374 26866549 -2138107 - NTS_DM Other Other -65 175 1 1 789 1947 8 17 13 chrUextra 26866549 26866788 -2137868 - NTS_DM Other Other 0 240 1 1 789 1416 0 22 16 chrUextra 26866788 26866971 -2137685 - NTS_DM Other Other 0 240 57 1 789 5558 2 0 2 chrUextra 26867071 26867668 -2136988 + SSU-rRNA_Dme rRNA rRNA 308 903 -1092 1 789 5420 10 0 0 chrUextra 26867768 26868365 -2136291 + FW_DM LINE Jockey 2131 2727 -1965 1 789 5554 2 0 0 chrUextra 26868465 26869062 -2135594 - LSU-rRNA_Dme rRNA rRNA -630 3270 2674 1 789 2681 178 8 22 chrUextra 26869162 26869759 -2134897 - SAR_DM Satellite Satellite -369 1103 515 1 790 2805 176 12 8 chrUextra 26869859 26870456 -2134200 + SAR_DM Satellite Satellite 198 796 -676 1 790 5097 25 2 0 chrUextra 26870556 26871153 -2133503 + NINJA_I LTR Pao 3839 4436 -1575 1 790 2761 179 15 8 chrUextra 26871253 26871845 -2132811 + SAR_DM Satellite Satellite 481 1076 -396 1 790 3894 45 0 4 chrUextra 26871950 26872416 -2132240 + R1_DM LINE R1 1380 1843 -3513 1 790 1207 15 0 0 chrUextra 26872410 26872547 -2132109 + R1_DM LINE R1 2087 2223 -3133 1 790 1569 14 0 0 chrUextra 26872648 26872867 -2131789 + (TATAA)n Simple_repeat Simple_repeat 1 219 0 1 790 3455 3 3 0 chrUextra 26872867 26873244 -2131412 - IVK_DM LINE I -4 5398 5021 1 790 2709 180 30 5 chrUextra 26873349 26873941 -2130715 - SAR_DM Satellite Satellite -610 862 256 1 790 5515 5 0 0 chrUextra 26874043 26874638 -2130018 + SSU-rRNA_Dme rRNA rRNA 382 976 -1019 1 790 1796 52 0 0 chrUextra 26874746 26874959 -2129697 + R1_DM LINE R1 1247 1459 -3897 1 790 3120 28 0 3 chrUextra 26874970 26875335 -2129321 + R1_DM LINE R1 1556 1919 -3437 1 790 2478 112 15 27 chrUextra 26875435 26876032 -2128624 + DMSAT6 Satellite Satellite 1 589 -97 1 790 4708 6 6 7 chrUextra 26876132 26876672 -2127984 + LSU-rRNA_Dme rRNA rRNA 1253 1791 -2109 1 790 2596 87 13 39 chrUextra 26876829 26877426 -2127230 + DMSAT6 Satellite Satellite 1 582 -29 1 790 1332 18 0 6 chrUextra 26877601 26877766 -2126890 - NTS_DM Other Other -39 201 38 1 790 928 9 0 27 chrUextra 26877766 26877878 -2126778 - NTS_DM Other Other -107 133 25 1 790 22 56 0 0 chrUextra 26877904 26877940 -2126716 + AT_rich Low_complexity Low_complexity 1 36 0 1 790 277 176 0 19 chrUextra 26877953 26878005 -2126651 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 252 216 0 19 chrUextra 26878036 26878088 -2126568 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 5372 7 0 3 chrUextra 26878223 26878820 -2125836 - R1_DM LINE R1 -93 5263 4669 1 790 2706 16 29 0 chrUextra 26878932 26879244 -2125412 - QUASIMODO_I LTR Gypsy -5739 321 1 1 790 2476 4 0 4 chrUextra 26879244 26879517 -2125139 - QUASIMODO_LTR LTR Gypsy 0 658 387 1 790 1665 271 35 49 chrUextra 26879617 26880214 -2124442 - MAX_I LTR Pao -801 7113 6525 1 790 2501 92 12 28 chrUextra 26880340 26880911 -2123745 + DMSAT6 Satellite Satellite 1 562 -4 1 790 428 0 0 0 chrUextra 26881012 26881065 -2123591 + NTS_DM Other Other 81 133 -107 1 790 1332 18 0 6 chrUextra 26881065 26881230 -2123426 + NTS_DM Other Other 38 201 -39 1 790 21 57 0 0 chrUextra 26881230 26881265 -2123391 + AT_rich Low_complexity Low_complexity 1 35 0 1 790 869 19 9 27 chrUextra 26881291 26881402 -2123254 + NTS_DM Other Other 25 133 -107 1 790 870 0 0 0 chrUextra 26881402 26881498 -2123158 + NTS_DM Other Other 38 133 -107 1 790 893 27 0 0 chrUextra 26881498 26881608 -2123048 + NTS_DM Other Other 38 147 -93 1 790 2651 189 15 7 chrUextra 26881708 26882305 -2122351 - SAR_DM Satellite Satellite -673 799 198 1 790 3440 148 5 14 chrUextra 26882405 26882999 -2121657 - TAHRE LINE telomeric -8 10455 9867 1 790 1854 21 17 17 chrUextra 26883126 26883366 -2121290 + NTS_DM Other Other 1 240 0 1 790 1864 21 17 17 chrUextra 26883366 26883606 -2121050 + NTS_DM Other Other 1 240 0 1 790 828 21 0 0 chrUextra 26883606 26883699 -2120957 + NTS_DM Other Other 1 93 -147 1 790 2443 92 19 44 chrUextra 26883799 26884368 -2120288 + DMSAT6 Satellite Satellite 1 555 -71 1 790 4387 52 34 5 chrUextra 26884496 26885093 -2119563 - R1_DM LINE R1 -1596 3760 3252 1 790 1387 47 5 54 chrUextra 26885194 26885397 -2119259 + BATUMI_LTR LTR Pao 80 272 0 1 790 3182 28 20 10 chrUextra 26885397 26885790 -2118866 + BATUMI_I LTR Pao 1 397 -7566 1 790 3046 156 12 10 chrUextra 26885890 26886487 -2118169 + SAR_DM Satellite Satellite 389 986 -486 1 790 2463 111 17 20 chrUextra 26886588 26887179 -2117477 - DMSAT6 Satellite Satellite -77 588 1 1 790 734 0 12 0 chrUextra 26887284 26887370 -2117286 + (TTATA)n Simple_repeat Simple_repeat 4 90 0 1 790 3333 6 0 0 chrUextra 26887370 26887731 -2116925 - BEL_LTR LTR Pao 0 361 1 1 790 1340 0 13 0 chrUextra 26887731 26887881 -2116775 - BEL_I LTR Pao 0 5404 5253 1 790 5216 27 3 0 chrUextra 26888677 26889273 -2115383 + R1_DM LINE R1 4679 5276 -80 1 790 522 0 0 0 chrUextra 26889373 26889431 -2115225 + (GAGAA)n Simple_repeat Simple_repeat 2 59 0 1 790 5502 2 0 0 chrUextra 26890069 26890665 -2113991 + DOC2_DM LINE Jockey 4126 4721 -72 1 790 404 0 0 0 chrUextra 26890765 26890810 -2113846 - G6_DM LINE Jockey -1997 45 1 1 790 1883 9 0 13 chrUextra 26890808 26891043 -2113613 + S_DM DNA Tc1 1505 1736 0 1 790 1860 85 3 28 chrUextra 26891071 26891361 -2113295 + TART LINE telomeric 2890 3172 -11305 1 790 1221 193 8 17 chrUextra 26891475 26892057 -2112599 - SAR_DM Satellite Satellite -749 577 1 1 790 2462 114 38 14 chrUextra 26892170 26892753 -2111903 + DMSAT6 Satellite Satellite 1 597 0 1 790 5504 0 3 0 chrUextra 26892853 26893449 -2111207 - LSU-rRNA_Dme rRNA rRNA -626 3274 2677 1 790 5479 0 0 0 chrUextra 26894245 26894841 -2109815 - ROO_I LTR Pao -3537 4719 4124 1 790 5414 5 10 0 chrUextra 26894941 26895537 -2109119 - IVK_DM LINE I -138 5264 4663 1 790 2653 87 37 10 chrUextra 26895637 26896233 -2108423 + DMSAT6 Satellite Satellite 1 612 -46 1 790 2664 181 15 12 chrUextra 26896335 26896929 -2107727 - SAR_DM Satellite Satellite -416 1056 461 1 790 5184 29 0 0 chrUextra 26897725 26898321 -2106335 + R1_DM LINE R1 2283 2878 -2478 1 790 596 218 7 22 chrUextra 26898424 26898560 -2106096 - HETRP_DM Satellite Satellite -190 1682 1549 1 790 210 37 0 0 chrUextra 26898560 26898587 -2106069 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 790 706 191 13 26 chrUextra 26898731 26898887 -2105769 - HETRP_DM Satellite Satellite -190 1682 1529 1 790 4673 61 0 5 chrUextra 26899117 26899713 -2104943 - STALKER4_I LTR Gypsy -1361 5169 4577 1 790 5377 0 0 0 chrUextra 26899823 26900409 -2104247 - ROO_I LTR Pao -2320 5936 5351 1 790 5467 7 0 0 chrUextra 26900509 26901105 -2103551 + R1_DM LINE R1 4689 5284 -72 1 790 3203 8 3 0 chrUextra 26901205 26901589 -2103067 + Invader2_I LTR Gypsy 4208 4592 0 1 790 1865 19 0 5 chrUextra 26901589 26901801 -2102855 + Invader2_LTR LTR Gypsy 1 211 -55 1 790 2691 178 13 17 chrUextra 26901901 26902497 -2102159 + SAR_DM Satellite Satellite 483 1076 -396 1 790 2801 82 17 12 chrUextra 26902597 26903193 -2101463 - DMSAT6 Satellite Satellite -89 599 1 1 790 3288 12 81 2 chrUextra 26903293 26903889 -2100767 - SSU-rRNA_Dme rRNA rRNA -604 1391 749 1 790 2706 190 7 7 chrUextra 26903991 26904585 -2100071 - SAR_DM Satellite Satellite -670 802 209 1 790 4989 5 8 0 chrUextra 26904685 26905281 -2099375 + PROTOP_A DNA P 224 824 -281 1 790 4450 64 3 34 chrUextra 26905381 26905977 -2098679 + Gypsy12_LTR LTR Gypsy 313 890 -1446 1 790 1620 13 0 3 chrUextra 26906361 26906671 -2097985 + (TTGTG)n Simple_repeat Simple_repeat 1 309 0 1 790 5359 0 0 2 chrUextra 26908861 26909457 -2095199 + ROO_I LTR Pao 4790 5384 -2872 1 790 1606 11 5 0 chrUextra 26909557 26909744 -2094912 + DM176_LTR LTR Gypsy 320 507 0 1 790 3359 20 0 27 chrUextra 26909744 26910153 -2094503 + DM176_I LTR Gypsy 1 398 -6022 1 790 537 16 0 0 chrUextra 26910253 26910315 -2094341 + (TTCTC)n Simple_repeat Simple_repeat 3 64 0 1 790 2419 244 49 8 chrUextra 26910955 26911545 -2093111 - TABOR_I LTR Gypsy -1998 4338 3725 1 790 1984 169 8 8 chrUextra 26912341 26912930 -2091726 + SAR_DM Satellite Satellite 1 588 -558 1 790 1610 188 35 7 chrUextra 26913038 26913612 -2091044 - SAR_DM Satellite Satellite -749 590 1 1 790 4783 40 35 5 chrUextra 26913733 26914329 -2090327 + R1_DM LINE R1 802 1415 -3941 1 790 3481 0 0 3 chrUextra 26914429 26914814 -2089842 + Copia_I LTR Copia 436 819 -3774 1 790 2597 101 10 24 chrUextra 26915125 26915715 -2088941 - DMSAT6 Satellite Satellite -88 582 1 1 790 1798 77 3 29 chrUextra 26915820 26916082 -2088574 + STALKER4_LTR LTR Gypsy 149 399 -3 1 790 25 0 0 0 chrUextra 26916170 26916195 -2088461 + AT_rich Low_complexity Low_complexity 1 25 0 1 790 825 207 21 21 chrUextra 26916219 26916411 -2088245 + Stalker2_I LTR Gypsy 291 482 -6920 1 790 2677 100 19 27 chrUextra 26916525 26917110 -2087546 - DMSAT6 Satellite Satellite 0 580 1 1 790 2852 183 5 3 chrUextra 26917211 26917803 -2086853 + SAR_DM Satellite Satellite 287 879 -593 1 790 841 45 45 0 chrUextra 26917905 26918015 -2086641 + ARS406_DM Unknown Unknown 75 189 -164 1 790 3594 249 33 34 chrUextra 26917917 26919193 -2085463 - SAR_DM Satellite Satellite -203 1275 1 1 790 2752 172 9 11 chrUextra 26919296 26919867 -2084789 + SAR_DM Satellite Satellite 507 1076 -396 1 790 3001 167 8 10 chrUextra 26919991 26920585 -2084071 - SAR_DM Satellite Satellite -466 1006 414 1 790 1035 101 78 6 chrUextra 26921098 26921277 -2083379 - DMSAT6 Satellite Satellite -251 219 28 1 790 384 238 0 0 chrUextra 26921380 26921506 -2083150 + (CAAA)n Simple_repeat Simple_repeat 4 129 0 1 790 5011 12 20 2 chrUextra 26922075 26922670 -2081986 + Invader2_I LTR Gypsy 68 673 -3919 1 790 5052 35 0 2 chrUextra 26922770 26923365 -2081291 - DMRT1B LINE R1 -628 4555 3962 1 790 2618 83 25 5 chrUextra 26923465 26924060 -2080596 + DMSAT6 Satellite Satellite 1 607 -40 1 790 1726 171 24 16 chrUextra 26924169 26924543 -2080113 - SAR_DM Satellite Satellite -535 937 561 1 790 1079 16 0 0 chrUextra 26924557 26924686 -2079970 - BS LINE Jockey 0 5126 4998 1 790 408 121 0 0 chrUextra 26924687 26924745 -2079911 + ARS406_DM Unknown Unknown 132 189 -164 1 790 582 98 0 0 chrUextra 26924855 26924937 -2079719 - Stalker2_I LTR Gypsy -3945 3457 3376 1 790 3459 18 0 0 chrUextra 26924933 26925333 -2079323 - STALKER4_I LTR Gypsy -3510 3020 2621 1 790 1130 0 0 0 chrUextra 26925329 26925450 -2079206 - STALKER4_I LTR Gypsy -2239 4291 4171 1 790 4040 111 5 15 chrUextra 26925550 26926145 -2078511 - Gypsy12_I LTR Gypsy -3051 2495 1907 1 790 2666 190 14 12 chrUextra 26926246 26926838 -2077818 + SAR_DM Satellite Satellite 293 885 -587 1 790 2433 128 14 42 chrUextra 26926940 26927532 -2077124 - DMSAT6 Satellite Satellite -37 574 1 1 790 2526 114 7 24 chrUextra 26927635 26928229 -2076427 + DMSAT6 Satellite Satellite 1 583 -64 1 790 26 30 0 0 chrUextra 26928872 26928905 -2075751 + AT_rich Low_complexity Low_complexity 1 33 0 1 790 5375 7 2 3 chrUextra 26929025 26929620 -2075036 + LSU-rRNA_Dme rRNA rRNA 1047 1640 -2260 1 790 691 0 0 0 chrUextra 26930415 26930495 -2074161 + DM176_I LTR Gypsy 3109 3188 -3232 1 790 4637 2 27 0 chrUextra 26930491 26931009 -2073647 + DM176_I LTR Gypsy 3308 3839 -2581 1 790 2487 7 0 4 chrUextra 26931110 26931387 -2073269 + LSU-rRNA_Dme rRNA rRNA 3625 3900 0 1 790 266 196 0 19 chrUextra 26931488 26931540 -2073116 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 790 266 196 0 19 chrUextra 26931580 26931632 -2073024 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 790 5191 27 2 0 chrUextra 26931805 26932400 -2072256 - R1_DM LINE R1 -138 5218 4623 1 790 2451 99 3 61 chrUextra 26932523 26933095 -2071561 - DMSAT6 Satellite Satellite 0 538 1 1 790 3037 166 17 5 chrUextra 26933196 26933790 -2070866 - SAR_DM Satellite Satellite -535 937 337 1 790 1736 202 119 18 chrUextra 26933894 26934448 -2070208 - SAR_DM Satellite Satellite -683 789 180 1 790 751 133 22 15 chrUextra 26934348 26934485 -2070171 + ARS406_DM Unknown Unknown 8 145 -208 1 790 5308 0 25 0 chrUextra 26935280 26935875 -2068781 + ROO_I LTR Pao 6163 6772 -1484 1 790 297 0 0 0 chrUextra 26935975 26936008 -2068648 + (TTCTC)n Simple_repeat Simple_repeat 2 34 0 1 790 2992 158 20 7 chrUextra 26936678 26937265 -2067391 + SAR_DM Satellite Satellite 326 920 -552 1 790 2969 181 7 3 chrUextra 26937366 26937960 -2066696 - SAR_DM Satellite Satellite -620 852 257 1 790 4349 71 3 0 chrUextra 26938060 26938655 -2066001 - DM412 LTR Gypsy -3000 3897 3301 1 790 713 103 112 0 chrUextra 26938755 26938871 -2065785 - G2_DM LINE Jockey -447 2655 2527 1 790 1216 44 0 0 chrUextra 26938867 26939026 -2065630 + G2_DM LINE Jockey 2934 3092 -10 1 790 2468 53 6 6 chrUextra 26939026 26939350 -2065306 - G2_DM LINE Jockey -574 2528 2205 1 790 2080 178 18 10 chrUextra 26939451 26939907 -2064749 - SAR_DM Satellite Satellite -521 598 49 1 790 848 30 0 0 chrUextra 26939907 26940007 -2064649 + ARS406_DM Unknown Unknown 90 189 -164 1 790 2080 178 18 10 chrUextra 26940007 26940045 -2064611 - SAR_DM Satellite Satellite -521 48 1 1 790 5517 3 0 0 chrUextra 26940145 26940740 -2063916 - LSU-rRNA_Dme rRNA rRNA -847 3053 2459 1 790 5438 3 0 0 chrUextra 26940840 26941435 -2063221 - R1_DM LINE R1 -1908 3448 2854 1 790 1611 0 0 0 chrUextra 26941535 26941832 -2062824 + (CACAA)n Simple_repeat Simple_repeat 1 297 0 1 790 2841 21 3 0 chrUextra 26942230 26942555 -2062101 + R1_DM LINE R1 3924 4249 -1107 1 790 2053 29 156 0 chrUextra 26942550 26942825 -2061831 + R1_DM LINE R1 458 775 -4581 1 790 1462 212 82 42 chrUextra 26942967 26943520 -2061136 - TAHRE LINE telomeric -3805 10672 9888 1 790 1005 289 38 23 chrUextra 26943641 26944215 -2060441 + SAR_DM Satellite Satellite 205 787 -685 1 790 1071 0 0 0 chrUextra 26944321 26944440 -2060216 + (TG)n Simple_repeat Simple_repeat 1 119 0 1 790 2510 92 22 17 chrUextra 26945011 26945605 -2059051 + DMSAT6 Satellite Satellite 1 597 0 1 790 2486 111 12 16 chrUextra 26946425 26946995 -2057661 + DMSAT6 Satellite Satellite 1 568 -1 1 790 369 0 0 0 chrUextra 26947649 26947690 -2056966 + (CAAGA)n Simple_repeat Simple_repeat 5 45 0 1 790 3182 275 43 21 chrUextra 26947790 26949775 -2054881 - SAR_DM Satellite Satellite -454 2027 1 1 790 1158 122 0 0 chrUextra 26949875 26950319 -2054337 + (TA)n Simple_repeat Simple_repeat 1 444 0 1 790 1113 74 0 0 chrUextra 26950322 26950470 -2054186 - DOC3_DM LINE Jockey -4158 582 435 1 790 2995 157 15 10 chrUextra 26950573 26951160 -2053496 + SAR_DM Satellite Satellite 369 958 -514 1 790 1121 65 184 23 chrUextra 26951510 26951684 -2052972 - DMCR1A LINE CR1 0 4470 4269 1 790 1530 23 0 0 chrUextra 26951683 26951858 -2052798 - DMCR1A LINE CR1 -353 4117 3943 1 790 286 0 0 0 chrUextra 26951958 26951990 -2052666 + DM1731_I LTR Copia 3945 3976 0 1 790 2885 39 0 0 chrUextra 26951990 26952326 -2052330 + DM1731_LTR LTR Copia 1 336 0 1 790 1108 164 13 9 chrUextra 26952325 26952381 -2052275 + SAR_DM Satellite Satellite 399 623 -846 1 790 1198 83 0 0 chrUextra 26952381 26952549 -2052107 - ARS406_DM Unknown Unknown -164 189 22 1 790 1569 21 5 0 chrUextra 26952652 26952841 -2051815 + Invader4_I LTR Gypsy 2224 2413 0 1 790 3217 3 0 0 chrUextra 26952841 26953187 -2051469 + Invader4_LTR LTR Gypsy 1 346 0 1 790 233 29 0 0 chrUextra 26953187 26953219 -2051437 - Copia2_LTR_DM LTR Copia -166 32 1 1 790 3641 271 61 26 chrUextra 26953346 26955304 -2049352 + SAR_DM Satellite Satellite 1 2026 -203 1 790 683 47 0 0 chrUextra 26955242 26955328 -2049328 - ARS406_DM Unknown Unknown -164 189 104 1 790 1060 16 0 0 chrUextra 26955428 26955554 -2049102 - NTS_DM Other Other -77 163 38 1 790 906 9 0 35 chrUextra 26955554 26955667 -2048989 - NTS_DM Other Other -107 133 25 1 790 22 56 0 0 chrUextra 26955693 26955729 -2048927 + AT_rich Low_complexity Low_complexity 1 36 0 1 790 278 176 0 19 chrUextra 26955742 26955794 -2048862 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 268 196 0 19 chrUextra 26955825 26955877 -2048779 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 268 196 0 19 chrUextra 26955917 26955969 -2048687 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 4571 68 34 14 chrUextra 26956122 26956716 -2047940 + Gypsy12_I LTR Gypsy 4449 5054 -492 1 790 4104 23 2 0 chrUextra 26957510 26957985 -2046671 - R1_DM LINE R1 -2459 2897 2422 1 790 944 27 0 0 chrUextra 26957986 26958096 -2046560 - ACCORD2_LTR LTR Gypsy -1 214 105 1 790 1233 73 0 0 chrUextra 26958204 26958382 -2046274 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 790 717 157 0 0 chrUextra 26958382 26958535 -2046121 + (AGATG)n Simple_repeat Simple_repeat 5 157 0 1 790 598 6 0 135 chrUextra 26958898 26959269 -2045387 + (TAAAAA)n Simple_repeat Simple_repeat 1 320 0 1 790 5266 0 2 2 chrUextra 26959619 26960186 -2044470 - LSU-rRNA_Dme rRNA rRNA 0 3900 3334 1 790 209 179 0 0 chrUextra 26961426 26961465 -2043191 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 790 298 204 0 31 chrUextra 26961473 26961569 -2043087 - ROO_I LTR Pao -7523 733 641 1 790 2787 0 3 3 chrUextra 26961674 26961980 -2042676 + R2_DM LINE R2 3302 3607 0 1 790 674 38 25 0 chrUextra 26961981 26962061 -2042595 + LSU-rRNA_Dme rRNA rRNA 2578 2659 -1241 1 790 1881 9 0 0 chrUextra 26962058 26962268 -2042388 + R1_DM LINE R1 4803 5012 -344 1 790 2290 50 4 0 chrUextra 26962368 26962649 -2042007 - R1_DM LINE R1 -242 5114 4833 1 790 2727 22 0 0 chrUextra 26962647 26962962 -2041694 - R1_DM LINE R1 -1697 3659 3345 1 790 5424 2 2 3 chrUextra 26963062 26963656 -2041000 + LSU-rRNA_Dme rRNA rRNA 749 1341 -2559 1 790 639 0 0 0 chrUextra 26964450 26964521 -2040135 + (TTGTG)n Simple_repeat Simple_repeat 2 72 0 1 790 301 0 22 43 chrUextra 26965150 26965196 -2039460 + (TAA)n Simple_repeat Simple_repeat 3 47 0 1 790 4247 15 0 8 chrUextra 26965216 26965738 -2038918 - HMSBEAGLE_I LTR Gypsy -5742 787 270 1 790 2876 178 8 8 chrUextra 26965843 26966432 -2038224 - SAR_DM Satellite Satellite -425 1047 459 1 790 21 36 0 0 chrUextra 26966870 26966898 -2037758 + AT_rich Low_complexity Low_complexity 1 28 0 1 790 34 24 0 0 chrUextra 26967378 26967419 -2037237 + AT_rich Low_complexity Low_complexity 1 41 0 1 790 994 0 9 0 chrUextra 26967708 26967820 -2036836 + LSU-rRNA_Dme rRNA rRNA 1 113 -3787 1 790 1180 8 0 8 chrUextra 26967923 26968057 -2036599 - NTS_DM Other Other -107 133 1 1 790 1878 21 17 17 chrUextra 26968057 26968297 -2036359 - NTS_DM Other Other 0 240 1 1 790 1506 25 20 20 chrUextra 26968297 26968500 -2036156 - NTS_DM Other Other 0 240 38 1 790 2640 3 0 0 chrUextra 26969308 26969592 -2035064 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 1 790 2820 13 0 0 chrUextra 26969590 26969902 -2034754 - R1_DM LINE R1 0 5356 5045 1 790 2901 178 10 5 chrUextra 26970003 26970591 -2034065 + SAR_DM Satellite Satellite 272 862 -610 1 790 680 0 0 12 chrUextra 26970696 26970777 -2033879 + (CGAGA)n Simple_repeat Simple_repeat 1 80 0 1 790 1620 0 0 0 chrUextra 26970779 26971024 -2033632 + (GAGAA)n Simple_repeat Simple_repeat 1 245 0 1 790 2906 185 8 5 chrUextra 26971391 26971984 -2032672 + SAR_DM Satellite Satellite 224 818 -654 1 790 576 0 0 0 chrUextra 26972778 26972842 -2031814 + (GAGAA)n Simple_repeat Simple_repeat 5 68 0 1 790 5034 2 0 2 chrUextra 26973472 26974015 -2030641 + LSU-rRNA_Dme rRNA rRNA 2145 2686 -1214 1 790 483 0 0 0 chrUextra 26974012 26974066 -2030590 + R1_DM LINE R1 852 905 -4451 1 790 2965 48 6 0 chrUextra 26974166 26974522 -2030134 + G5_DM LINE Jockey 4010 4367 -489 1 790 1926 46 4 0 chrUextra 26974519 26974760 -2029896 + G5_DM LINE Jockey 4602 4843 -13 1 790 3826 0 0 0 chrUextra 26974860 26975279 -2029377 - R2_DM LINE R2 -2807 800 382 1 790 1593 6 0 0 chrUextra 26975282 26975454 -2029202 - LSU-rRNA_Dme rRNA rRNA -1322 2578 2407 1 790 2255 116 7 67 chrUextra 26976955 26977534 -2027122 + DMSAT6 Satellite Satellite 1 544 0 1 790 278 176 0 19 chrUextra 26977637 26977689 -2026967 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 790 22 56 0 0 chrUextra 26977702 26977738 -2026918 + AT_rich Low_complexity Low_complexity 1 36 0 1 790 917 18 0 27 chrUextra 26977764 26977876 -2026780 + NTS_DM Other Other 25 133 -107 1 790 1532 20 20 20 chrUextra 26977876 26978079 -2026577 + NTS_DM Other Other 38 240 0 1 790 1314 20 0 0 chrUextra 26978079 26978230 -2026426 + NTS_DM Other Other 1 151 -89 1 790 34 24 0 0 chrUextra 26978403 26978444 -2026212 + AT_rich Low_complexity Low_complexity 1 41 0 1 790 21 95 0 0 chrUextra 26978658 26978721 -2025935 + AT_rich Low_complexity Low_complexity 1 63 0 1 790 1770 0 0 0 chrUextra 26978733 26978924 -2025732 + LSU-rRNA_Dme rRNA rRNA 1 191 -3709 1 790 497 17 0 17 chrUextra 26979024 26979083 -2025573 - NTS_DM Other Other -182 58 1 1 790 1526 20 20 20 chrUextra 26979083 26979286 -2025370 - NTS_DM Other Other 0 240 38 1 790 876 0 0 0 chrUextra 26979286 26979382 -2025274 - NTS_DM Other Other -107 133 38 1 790 898 9 9 27 chrUextra 26979382 26979493 -2025163 - NTS_DM Other Other -107 133 25 1 790 21 57 0 0 chrUextra 26979519 26979554 -2025102 + AT_rich Low_complexity Low_complexity 1 35 0 1 790 451 32 0 16 chrUextra 26979554 26979618 -2025038 - NTS_DM Other Other -39 201 139 1 790 483 66 0 0 chrUextra 26979718 26979779 -2024877 - DIVER2_I LTR Pao -2003 2144 2084 1 790 917 45 0 0 chrUextra 26979789 26979900 -2024756 - DIVER2_I LTR Pao -4036 111 1 1 790 2753 28 91 30 chrUextra 26979900 26980263 -2024393 - DIVER2_LTR LTR Pao 0 385 1 1 790 376 75 19 0 chrUextra 26980263 26980312 -2024344 + G3_DM LINE Jockey 4283 4332 -273 1 790 2889 176 10 10 chrUextra 26980419 26981006 -2023650 - SAR_DM Satellite Satellite -433 1039 453 1 790 5152 24 0 0 chrUextra 26981106 26981698 -2022958 - R1_DM LINE R1 -2303 3053 2462 1 790 5331 2 0 0 chrUextra 26981800 26982394 -2022262 - LSU-rRNA_Dme rRNA rRNA -2956 944 351 1 790 1184 27 14 0 chrUextra 26982494 26982641 -2022015 - BATUMI_I LTR Pao -1388 6575 6427 1 790 3588 14 0 2 chrUextra 26982664 26983088 -2021568 + BATUMI_I LTR Pao 7303 7725 -238 1 790 3584 5 7 10 chrUextra 26983188 26983603 -2021053 - DM297_LTR LTR Gypsy 0 414 1 1 790 5138 2 0 34 chrUextra 26983882 26984470 -2020186 + BS2 LINE Jockey 4154 4721 0 1 790 5106 20 2 8 chrUextra 26984576 26985170 -2019486 - LSU-rRNA_Dme rRNA rRNA -2468 1432 843 1 790 5430 3 0 0 chrUextra 26985270 26985864 -2018792 - R1_DM LINE R1 -1640 3716 3123 1 790 5511 0 0 2 chrUextra 26985964 26986557 -2018099 - LSU-rRNA_Dme rRNA rRNA -603 3297 2706 1 790 517 61 207 0 chrUextra 26986657 26986739 -2017917 - BATUMI_I LTR Pao -858 7105 7007 1 790 3787 58 22 6 chrUextra 26986745 26987250 -2017406 - BATUMI_I LTR Pao 0 7963 7451 1 790 5012 25 0 2 chrUextra 26987350 26987943 -2016713 + QUASIMODO_I LTR Gypsy 4575 5166 -894 1 790 2966 138 17 46 chrUextra 26988049 26988636 -2016020 + SAR_DM Satellite Satellite 353 922 -550 1 790 1507 284 37 16 chrUextra 26988759 26989328 -2015328 + G6_DM LINE Jockey 322 902 -1140 1 790 5242 5 2 3 chrUextra 26989429 26990022 -2014634 - R1_DM LINE R1 -1073 4283 3692 1 790 2900 171 10 10 chrUextra 26990124 26990715 -2013941 - SAR_DM Satellite Satellite -417 1055 465 1 790 534 119 36 0 chrUextra 26990865 26990949 -2013707 - NTS_DM Other Other -150 90 4 1 790 1401 6 0 18 chrUextra 26991060 26991225 -2013431 - NTS_DM Other Other -78 162 1 1 790 1438 0 22 16 chrUextra 26991225 26991408 -2013248 - NTS_DM Other Other 0 240 57 1 790 5306 3 3 7 chrUextra 26991508 26992101 -2012555 + SSU-rRNA_Dme rRNA rRNA 905 1495 -500 1 790 462 226 35 0 chrUextra 26992201 26992316 -2012340 + Invader1_LTR LTR Gypsy 195 313 -110 1 790 21 0 0 0 chrUextra 26992558 26992579 -2012077 + AT_rich Low_complexity Low_complexity 1 21 0 1 790 1526 37 5 11 chrUextra 26992894 26993085 -2011571 - LSU-rRNA_Dme rRNA rRNA -3710 190 1 1 790 34 24 0 0 chrUextra 26993373 26993414 -2011242 + AT_rich Low_complexity Low_complexity 1 41 0 1 790 752 0 0 0 chrUextra 26993587 26993674 -2010982 + R2_DM LINE R2 3521 3607 0 1 790 4696 4 0 0 chrUextra 26993674 26994180 -2010476 + LSU-rRNA_Dme rRNA rRNA 2578 3083 -817 1 790 5116 2 19 0 chrUextra 26994280 26994873 -2009783 + ROO_I LTR Pao 285 888 -7368 1 790 1637 0 5 5 chrUextra 26994973 26995157 -2009499 - R1_DM LINE R1 -5171 185 2 1 790 3808 0 0 0 chrUextra 26995159 26995566 -2009090 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2226 1 790 1620 3 0 0 chrUextra 26995851 26996186 -2008470 + (TTCTC)n Simple_repeat Simple_repeat 1 335 0 1 790 516 16 0 0 chrUextra 26996198 26996259 -2008397 + (GAGAA)n Simple_repeat Simple_repeat 5 65 0 1 790 5387 0 0 2 chrUextra 26996359 26996952 -2007704 - ROO_I LTR Pao -2846 5410 4819 1 790 1763 87 4 0 chrUextra 26997052 26997283 -2007373 + DMCR1A LINE CR1 3289 3520 -950 1 790 2889 55 25 6 chrUextra 26997276 26997642 -2007014 + DMCR1A LINE CR1 3655 4027 -443 1 790 2064 196 29 66 chrUextra 26998440 26999031 -2005625 + TAHRE LINE telomeric 7053 7621 -2842 1 790 5111 27 0 2 chrUextra 26999132 26999724 -2004932 - DOC2_DM LINE Jockey -1236 3557 2967 1 790 1560 17 0 0 chrUextra 26999824 27000000 -2004656 - DMRT1B LINE R1 -833 4350 4175 1 790 3224 3 0 0 chrUextra 27000000 27000354 -2004302 - DMRT1B LINE R1 -1009 4174 3821 1 790 567 0 0 0 chrUextra 27000354 27000417 -2004239 + (CACAA)n Simple_repeat Simple_repeat 1 63 0 1 790 879 94 0 0 chrUextra 27000523 27000672 -2003984 + (CATGT)n Simple_repeat Simple_repeat 3 151 0 1 791 5464 2 0 0 chrUextra 27001210 27001803 -2002853 - R1_DM LINE R1 -1979 3377 2785 1 791 4805 29 72 0 chrUextra 27001903 27002484 -2002172 - R1_DM LINE R1 -1818 3538 2916 1 791 1201 0 7 0 chrUextra 27002597 27002738 -2001918 + Copia_LTR LTR Copia 135 276 0 1 791 2700 273 48 55 chrUextra 27002740 27003882 -2000774 - SAR_DM Satellite Satellite -411 1133 1 1 791 4671 6 6 6 chrUextra 27004043 27004575 -2000081 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1260 1 791 2255 217 8 14 chrUextra 27004676 27005268 -1999388 - SAR_DM Satellite Satellite -480 992 404 1 791 2541 176 22 6 chrUextra 27005368 27005912 -1998744 - SAR_DM Satellite Satellite -702 770 218 1 791 384 0 0 0 chrUextra 27005903 27005961 -1998695 - FW_DM LINE Jockey -2 4690 4633 1 791 456 170 69 10 chrUextra 27006211 27006312 -1998344 - Gypsy2_LTR LTR Gypsy -147 206 100 1 791 1230 116 152 67 chrUextra 27006336 27006651 -1998005 - DM297_LTR LTR Gypsy 0 414 73 1 791 2833 175 7 10 chrUextra 27006754 27007342 -1997314 + SAR_DM Satellite Satellite 462 1047 -425 1 791 1392 39 10 22 chrUextra 27007447 27008040 -1996616 + (TATAA)n Simple_repeat Simple_repeat 1 585 0 1 791 2967 15 84 0 chrUextra 27008140 27008648 -1996008 - DOC2_DM LINE Jockey -2809 1984 1434 1 791 612 25 12 0 chrUextra 27008652 27008733 -1995923 - DMRT1A LINE R1 0 5183 5102 1 791 5146 32 19 0 chrUextra 27008833 27009426 -1995230 - DIVER2_I LTR Pao -228 3919 3316 1 791 2723 94 30 12 chrUextra 27009526 27010118 -1994538 - DMSAT6 Satellite Satellite -130 603 1 1 791 2346 114 26 41 chrUextra 27010220 27010806 -1993850 + DMSAT6 Satellite Satellite 1 577 -97 1 791 2006 210 8 6 chrUextra 27010912 27011386 -1993270 + SAR_DM Satellite Satellite 541 1015 -457 1 791 964 35 0 0 chrUextra 27011389 27011505 -1993151 - ARS406_DM Unknown Unknown -189 164 49 1 791 2428 98 24 27 chrUextra 27011605 27012198 -1992458 + DMSAT6 Satellite Satellite 1 590 -108 1 791 28 48 0 0 chrUextra 27012305 27012347 -1992309 + AT_rich Low_complexity Low_complexity 1 42 0 1 791 532 119 36 0 chrUextra 27012621 27012705 -1991951 - NTS_DM Other Other -150 90 4 1 791 499 14 0 40 chrUextra 27012815 27012891 -1991765 - NTS_DM Other Other -78 162 90 1 791 2877 179 7 7 chrUextra 27012991 27013580 -1991076 - SAR_DM Satellite Satellite -602 870 282 1 791 2004 191 5 5 chrUextra 27013692 27014275 -1990381 - BATUMI_I LTR Pao -3165 4749 4091 1 791 2456 104 8 24 chrUextra 27014375 27014967 -1989689 + DMSAT6 Satellite Satellite 1 582 -79 1 791 533 85 37 0 chrUextra 27015071 27015153 -1989503 + FB4_DM DNA Tc1 329 413 -3676 1 791 514 112 0 48 chrUextra 27015118 27015202 -1989454 - Baggins1 LINE LOA -338 5115 5036 1 791 25 48 0 46 chrUextra 27015286 27015351 -1989305 + AT_rich Low_complexity Low_complexity 1 62 0 1 791 416 297 7 7 chrUextra 27016841 27016990 -1987666 + BURDOCK_I LTR Gypsy 850 998 -4862 1 791 2305 178 35 7 chrUextra 27017844 27018427 -1986229 + SAR_DM Satellite Satellite 1 599 -677 1 791 5130 14 0 2 chrUextra 27018527 27019119 -1985537 + MDG1_I LTR Gypsy 5457 6047 -549 1 791 430 41 0 0 chrUextra 27019249 27019298 -1985358 - Gypsy5_I LTR Gypsy -6460 49 1 1 791 3907 7 0 0 chrUextra 27019298 27019728 -1984928 - Gypsy5_LTR LTR Gypsy 0 430 1 1 791 741 12 0 0 chrUextra 27019728 27019811 -1984845 - Gypsy5_I LTR Gypsy 0 6509 6427 1 791 577 147 59 4 chrUextra 27019911 27020150 -1984506 + GA-rich Low_complexity Low_complexity 1 252 0 1 791 3023 0 0 6 chrUextra 27020168 27020503 -1984153 + Stalker2_LTR LTR Gypsy 1 333 -91 1 791 828 24 31 31 chrUextra 27020603 27020731 -1983925 + NTS_DM Other Other 113 240 0 1 791 1975 4 17 13 chrUextra 27020731 27020970 -1983686 + NTS_DM Other Other 1 240 0 1 791 1857 5 13 13 chrUextra 27020970 27021194 -1983462 + NTS_DM Other Other 1 224 -16 1 791 561 332 39 39 chrUextra 27021330 27021715 -1982941 + NOMAD_I LTR Gypsy 6178 6562 -10 1 791 2762 75 12 24 chrUextra 27021988 27022579 -1982077 + DMSAT6 Satellite Satellite 1 584 -29 1 791 1646 74 41 0 chrUextra 27022697 27022939 -1981717 - DM297_I LTR Gypsy -2234 3933 3682 1 791 2648 45 34 0 chrUextra 27022918 27023271 -1981385 - DM297_I LTR Gypsy -2023 4144 3780 1 791 2837 80 5 0 chrUextra 27023385 27023762 -1980894 + STALKER4_LTR LTR Gypsy 1 379 -23 1 791 2720 90 27 10 chrUextra 27024070 27024655 -1980001 - DMSAT6 Satellite Satellite -52 595 1 1 791 2396 95 7 93 chrUextra 27024755 27025347 -1979309 - DMSAT6 Satellite Satellite -78 540 1 1 791 3048 169 8 3 chrUextra 27025447 27026039 -1978617 + SAR_DM Satellite Satellite 267 861 -611 1 791 5350 7 0 0 chrUextra 27026139 27026731 -1977925 + DOC2_DM LINE Jockey 2604 3195 -1598 1 791 3478 153 6 2 chrUextra 27026831 27027380 -1977276 + IDEFIX_I LTR Gypsy 937 1487 -4141 1 791 305 75 0 0 chrUextra 27027382 27027422 -1977234 + IDEFIX_I LTR Gypsy 1726 1765 -3863 1 791 1574 39 0 0 chrUextra 27027523 27027705 -1976951 + R1_DM LINE R1 1662 1843 -3513 1 791 3658 22 0 0 chrUextra 27027699 27028115 -1976541 + R1_DM LINE R1 2087 2502 -2854 1 791 2536 190 14 17 chrUextra 27028215 27028799 -1975857 + SAR_DM Satellite Satellite 463 1044 -428 1 791 2520 98 2 31 chrUextra 27028907 27029499 -1975157 - DMSAT6 Satellite Satellite -141 574 1 1 791 2984 172 7 7 chrUextra 27029599 27030191 -1974465 + SAR_DM Satellite Satellite 256 847 -625 1 791 2563 117 91 116 chrUextra 27030291 27030862 -1973794 - TART LINE telomeric -6936 7541 6985 1 791 792 12 0 0 chrUextra 27031007 27031093 -1973563 - ROO_I LTR Pao -8170 86 1 1 791 4017 0 0 0 chrUextra 27031093 27031521 -1973135 - ROO_LTR LTR Pao 0 428 1 1 791 502 18 0 0 chrUextra 27031521 27031575 -1973081 - R1_DM LINE R1 -431 4925 4872 1 791 1697 238 27 34 chrUextra 27031675 27032262 -1972394 - SAR_DM Satellite Satellite -722 750 168 1 791 1517 6 0 0 chrUextra 27032367 27032531 -1972125 - R1_DM LINE R1 -390 4966 4803 1 791 3981 2 5 0 chrUextra 27032528 27032959 -1971697 - LSU-rRNA_Dme rRNA rRNA -1241 2659 2227 1 791 5181 8 2 2 chrUextra 27033059 27033651 -1971005 + STALKER4_I LTR Gypsy 4625 5216 -1314 1 791 2721 80 12 35 chrUextra 27033774 27034343 -1970313 - DMSAT6 Satellite Satellite 0 556 1 1 791 4927 15 69 5 chrUextra 27034443 27035035 -1969621 + STALKER4_I LTR Gypsy 4204 4833 -1697 1 791 242 160 39 20 chrUextra 27035135 27035186 -1969470 + G5_DM LINE Jockey 1819 1870 -2986 1 791 5000 16 12 0 chrUextra 27035165 27035727 -1968929 + G5_DM LINE Jockey 2604 3172 -1684 1 791 2714 185 8 8 chrUextra 27035831 27036419 -1968237 + SAR_DM Satellite Satellite 218 805 -667 1 791 5279 3 0 2 chrUextra 27036520 27037094 -1967562 - LSU-rRNA_Dme rRNA rRNA -1540 2360 1788 1 791 4938 8 40 2 chrUextra 27037211 27037803 -1966853 + QUASIMODO_I LTR Gypsy 3729 4343 -1717 1 791 2423 118 12 40 chrUextra 27037904 27038472 -1966184 + DMSAT6 Satellite Satellite 1 552 -84 1 791 1206 0 0 0 chrUextra 27038595 27038726 -1965930 - LSU-rRNA_Dme rRNA rRNA -3769 131 1 1 791 34 24 0 0 chrUextra 27039014 27039055 -1965601 + AT_rich Low_complexity Low_complexity 1 41 0 1 791 298 264 0 21 chrUextra 27039291 27039384 -1965272 - GTWIN_I LTR Gypsy -2997 3424 3334 1 791 282 196 0 0 chrUextra 27039376 27039432 -1965224 - DM297_I LTR Gypsy -3740 2427 2372 1 791 783 52 0 0 chrUextra 27039979 27040076 -1964580 - R1_DM LINE R1 -507 4849 4753 1 791 3879 48 0 18 chrUextra 27040077 27040571 -1964085 + R1_DM LINE R1 409 893 -4463 1 791 1011 26 0 0 chrUextra 27040678 27040794 -1963862 - CIRCE LINE Composite -4813 1543 1428 1 791 692 92 20 10 chrUextra 27040794 27040893 -1963763 + STALKER4_LTR LTR Gypsy 280 379 -23 1 791 25 0 0 0 chrUextra 27041007 27041032 -1963624 + AT_rich Low_complexity Low_complexity 1 25 0 1 791 901 218 5 5 chrUextra 27041056 27041263 -1963393 + Stalker2_I LTR Gypsy 291 497 -6905 1 791 2978 159 10 10 chrUextra 27041363 27041955 -1962701 + SAR_DM Satellite Satellite 267 858 -614 1 791 23 33 0 0 chrUextra 27042080 27042110 -1962546 + AT_rich Low_complexity Low_complexity 1 30 0 1 791 515 24 44 67 chrUextra 27042747 27042837 -1961819 + ROO_I LTR Pao 542 629 -7627 1 791 327 136 0 0 chrUextra 27042843 27042902 -1961754 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 791 506 45 0 0 chrUextra 27042902 27042969 -1961687 + ROO_I LTR Pao 730 796 -7460 1 791 3276 145 31 5 chrUextra 27043439 27044021 -1960635 - TART LINE telomeric -4931 9546 8950 1 791 929 97 16 44 chrUextra 27044131 27044497 -1960159 + GA-rich Low_complexity Low_complexity 1 356 0 1 791 5401 0 3 2 chrUextra 27044826 27045415 -1959241 + SSU-rRNA_Dme rRNA rRNA 638 1227 -768 1 791 2657 158 18 8 chrUextra 27045522 27046032 -1958624 + SAR_DM Satellite Satellite 400 914 -558 1 791 597 53 0 0 chrUextra 27046029 27046105 -1958551 - ARS406_DM Unknown Unknown -195 158 83 1 791 1538 34 0 6 chrUextra 27046206 27046688 -1957968 + (TATAA)n Simple_repeat Simple_repeat 1 478 0 1 791 734 41 10 0 chrUextra 27046699 27046797 -1957859 + (GAGAA)n Simple_repeat Simple_repeat 5 103 0 1 791 1668 178 16 28 chrUextra 27046898 27047488 -1957168 - SAR_DM Satellite Satellite -627 582 1 1 791 2637 196 7 7 chrUextra 27048279 27048870 -1955786 + SAR_DM Satellite Satellite 464 1054 -418 1 791 5419 2 0 2 chrUextra 27049661 27050252 -1954404 - R1_DM LINE R1 -1566 3790 3201 1 791 2807 171 12 12 chrUextra 27050352 27050943 -1953713 + SAR_DM Satellite Satellite 464 1054 -418 1 791 4848 37 2 24 chrUextra 27051734 27052321 -1952335 + Baggins1 LINE LOA 4880 5453 0 1 791 2644 101 16 9 chrUextra 27052438 27053016 -1951640 + DMSAT6 Satellite Satellite 1 581 0 1 791 5357 12 0 0 chrUextra 27053116 27053707 -1950949 + DMRT1B LINE R1 1709 2299 -2884 1 791 2596 180 27 14 chrUextra 27053807 27054393 -1950263 - SAR_DM Satellite Satellite -667 805 212 1 791 1258 0 0 0 chrUextra 27054510 27054645 -1950011 + 5S_DM RNA RNA 1 135 0 1 791 1258 0 0 0 chrUextra 27054876 27055011 -1949645 + 5S_DM RNA RNA 1 135 0 1 791 999 75 7 18 chrUextra 27055189 27055780 -1948876 + RSP Satellite Satellite 1 584 0 1 791 986 78 8 19 chrUextra 27055882 27056395 -1948261 + RSP Satellite Satellite 1 507 0 1 791 2725 182 10 9 chrUextra 27056571 27057152 -1947504 - SAR_DM Satellite Satellite -673 799 218 1 791 533 77 13 0 chrUextra 27057084 27057162 -1947494 + ARS406_DM Unknown Unknown 1 79 -274 1 791 1620 0 0 0 chrUextra 27057262 27057516 -1947140 + (GAGAA)n Simple_repeat Simple_repeat 1 254 0 1 791 5343 0 0 5 chrUextra 27058644 27059235 -1945421 + R1_DM LINE R1 2742 3329 -2027 1 791 2592 107 9 34 chrUextra 27059342 27059926 -1944730 + DMSAT6 Satellite Satellite 1 568 -3 1 791 2755 183 29 7 chrUextra 27060026 27060616 -1944040 - SAR_DM Satellite Satellite -544 928 326 1 791 1444 6 0 6 chrUextra 27060717 27060885 -1943771 - NTS_DM Other Other -73 167 1 1 791 1986 0 17 13 chrUextra 27060885 27061124 -1943532 - NTS_DM Other Other 0 240 1 1 791 1408 6 22 16 chrUextra 27061124 27061308 -1943348 - NTS_DM Other Other 0 240 56 1 791 34 24 0 0 chrUextra 27062434 27062475 -1942181 + AT_rich Low_complexity Low_complexity 1 41 0 1 791 5163 30 0 0 chrUextra 27063481 27064072 -1940584 + R1_DM LINE R1 2775 3365 -1991 1 791 2121 169 22 12 chrUextra 27064864 27065351 -1939305 + SAR_DM Satellite Satellite 1 596 -596 1 791 839 39 0 0 chrUextra 27065351 27065454 -1939202 - ARS406_DM Unknown Unknown -164 189 87 1 791 1041 93 0 0 chrUextra 27065555 27065884 -1938772 + (ACATG)n Simple_repeat Simple_repeat 1 329 0 1 791 2386 200 8 15 chrUextra 27066245 27066834 -1937822 - SAR_DM Satellite Satellite -683 789 205 1 791 742 19 36 27 chrUextra 27066936 27067046 -1937610 + NTS_DM Other Other 130 240 0 1 791 1388 6 0 18 chrUextra 27067046 27067211 -1937445 + NTS_DM Other Other 1 162 -78 1 791 532 119 36 0 chrUextra 27067321 27067405 -1937251 + NTS_DM Other Other 4 90 -150 1 791 1620 0 0 0 chrUextra 27068034 27068214 -1936442 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 791 5457 0 0 0 chrUextra 27068318 27068909 -1935747 + ROO_I LTR Pao 1999 2589 -5667 1 791 2731 84 12 14 chrUextra 27069009 27069600 -1935056 - DMSAT6 Satellite Satellite -90 590 1 1 791 5239 17 0 0 chrUextra 27069700 27070291 -1934365 - BARI_DM DNA Tc1 -818 910 320 1 791 5340 2 15 0 chrUextra 27071082 27071673 -1932983 + BARI_DM DNA Tc1 1033 1632 -96 1 791 2902 162 12 9 chrUextra 27071777 27072351 -1932305 - SAR_DM Satellite Satellite -526 946 371 1 791 3830 56 41 19 chrUextra 27072474 27073055 -1931601 - BATUMI_I LTR Pao -7270 693 100 1 791 1409 190 5 3 chrUextra 27073849 27074437 -1930219 + SAR_DM Satellite Satellite 1 588 -678 1 791 2851 74 69 0 chrUextra 27074540 27074917 -1929739 - Gypsy12_I LTR Gypsy -679 4867 4465 1 791 1572 117 0 0 chrUextra 27074914 27075128 -1929528 - Gypsy12_I LTR Gypsy -3725 1821 1608 1 791 2695 181 19 10 chrUextra 27075228 27075819 -1928837 + SAR_DM Satellite Satellite 427 1022 -450 1 791 2855 168 19 7 chrUextra 27075920 27076506 -1928150 - SAR_DM Satellite Satellite -587 885 293 1 791 450 0 0 0 chrUextra 27076609 27076659 -1927997 + (CAGCG)n Simple_repeat Simple_repeat 1 50 0 1 791 1620 37 0 0 chrUextra 27076659 27077197 -1927459 + (CACAA)n Simple_repeat Simple_repeat 1 538 0 1 791 1086 31 0 0 chrUextra 27077321 27077451 -1927205 + (GAGAA)n Simple_repeat Simple_repeat 2 131 0 1 791 973 70 3 19 chrUextra 27077999 27078579 -1926077 - RSP Satellite Satellite 0 571 1 1 791 2472 99 19 27 chrUextra 27078679 27079263 -1925393 + DMSAT6 Satellite Satellite 1 578 -74 1 791 805 11 0 0 chrUextra 27079369 27079458 -1925198 + BLASTOPIA_I LTR Gypsy 4393 4481 0 1 791 2281 18 7 11 chrUextra 27079458 27079734 -1924922 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 791 1158 122 0 0 chrUextra 27079736 27079958 -1924698 + (TA)n Simple_repeat Simple_repeat 1 222 0 1 791 2847 175 7 15 chrUextra 27080059 27080646 -1924010 + SAR_DM Satellite Satellite 298 879 -593 1 791 2393 179 20 17 chrUextra 27080749 27081338 -1923318 - SAR_DM Satellite Satellite -873 591 1 1 791 2624 101 10 24 chrUextra 27081449 27082026 -1922630 + DMSAT6 Satellite Satellite 1 568 -3 1 791 1289 33 22 22 chrUextra 27082819 27083004 -1921652 + NTS_DM Other Other 56 240 0 1 791 1838 25 17 17 chrUextra 27083004 27083244 -1921412 + NTS_DM Other Other 1 240 0 1 791 1334 30 0 6 chrUextra 27083244 27083409 -1921247 + NTS_DM Other Other 1 164 -76 1 791 1013 83 3 17 chrUextra 27083512 27084099 -1920557 - RSP Satellite Satellite -27 579 1 1 791 339 89 0 0 chrUextra 27084205 27084261 -1920395 + (CATGT)n Simple_repeat Simple_repeat 1 56 0 1 791 5433 0 2 0 chrUextra 27084889 27085479 -1919177 - R1_DM LINE R1 -3145 2211 1621 1 791 276 155 26 90 chrUextra 27085658 27085736 -1918920 - BS3_DM LINE Jockey -7 1783 1711 1 791 3654 3 0 0 chrUextra 27085777 27086169 -1918487 + LINEJ1_DM LINE Jockey 4432 4823 -197 1 791 2991 163 10 8 chrUextra 27086269 27086857 -1917799 - SAR_DM Satellite Satellite -515 957 369 1 791 5403 0 0 2 chrUextra 27086959 27087549 -1917107 + R1_DM LINE R1 1319 1907 -3449 1 791 2582 158 10 62 chrUextra 27087649 27088902 -1915754 - DMSAT6 Satellite Satellite -118 1188 1 1 791 2515 80 19 58 chrUextra 27089051 27089618 -1915038 + DMSAT6 Satellite Satellite 1 544 0 1 791 3687 0 2 0 chrUextra 27089719 27090113 -1914543 + SSU-rRNA_Dme rRNA rRNA 1601 1995 0 1 791 21 89 0 0 chrUextra 27090132 27090188 -1914468 + AT_rich Low_complexity Low_complexity 1 56 0 1 791 1619 6 6 0 chrUextra 27090409 27090587 -1914069 - LSU-rRNA_Dme rRNA rRNA -1082 2818 2640 1 791 3647 10 0 0 chrUextra 27090585 27090984 -1913672 - R1_DM LINE R1 0 5356 4958 1 791 2582 184 14 12 chrUextra 27091099 27091689 -1912967 + SAR_DM Satellite Satellite 209 799 -673 1 791 1620 0 0 0 chrUextra 27092479 27092763 -1911893 + (GAGAA)n Simple_repeat Simple_repeat 1 284 0 1 791 4527 95 0 0 chrUextra 27093169 27093759 -1910897 + Gypsy12_I LTR Gypsy 2696 3285 -2261 1 791 5188 22 0 0 chrUextra 27093859 27094449 -1910207 + NINJA_I LTR Pao 772 1361 -4650 1 791 1212 28 0 0 chrUextra 27094552 27094696 -1909960 + (CTTAT)n Simple_repeat Simple_repeat 4 147 0 1 791 2750 161 48 14 chrUextra 27095244 27095829 -1908827 - SAR_DM Satellite Satellite -514 958 354 1 791 5220 8 3 0 chrUextra 27095929 27096519 -1908137 + HETA LINE telomeric 3868 4459 -1622 1 791 300 0 100 0 chrUextra 27096619 27096679 -1907977 + (CATAG)n Simple_repeat Simple_repeat 5 70 0 1 791 1620 0 0 9 chrUextra 27096679 27097004 -1907652 + (TAGA)n Simple_repeat Simple_repeat 1 322 0 1 791 225 0 0 0 chrUextra 27097004 27097029 -1907627 + (CGATA)n Simple_repeat Simple_repeat 1 25 0 1 791 1571 0 0 6 chrUextra 27097029 27097209 -1907447 + (CGAT)n Simple_repeat Simple_repeat 1 179 0 1 791 2619 91 19 8 chrUextra 27097309 27097896 -1906760 - DMSAT6 Satellite Satellite -79 593 1 1 791 2966 49 58 44 chrUextra 27097999 27098449 -1906207 + DM176_LTR LTR Gypsy 24 479 -28 1 791 402 245 0 0 chrUextra 27098475 27098577 -1906079 - DM176_LTR LTR Gypsy 0 507 406 1 791 2533 172 11 10 chrUextra 27099378 27099901 -1904755 - SAR_DM Satellite Satellite -550 922 399 1 791 331 22 22 0 chrUextra 27099921 27099966 -1904690 + SAR_DM Satellite Satellite 371 416 -1056 1 791 1222 57 39 11 chrUextra 27100067 27100245 -1904411 + IDEFIX_LTR LTR Gypsy 412 594 0 1 791 25 0 0 0 chrUextra 27100436 27100461 -1904195 + AT_rich Low_complexity Low_complexity 1 25 0 1 791 5474 2 2 0 chrUextra 27100756 27101345 -1903311 + SSU-rRNA_Dme rRNA rRNA 1313 1902 -93 1 791 2638 176 14 24 chrUextra 27102826 27103408 -1901248 - SAR_DM Satellite Satellite -361 1111 536 1 791 279 125 236 0 chrUextra 27103694 27104101 -1900555 + (CTAAA)n Simple_repeat Simple_repeat 1 503 0 1 791 1164 45 0 0 chrUextra 27104890 27105045 -1899611 + (TAGA)n Simple_repeat Simple_repeat 2 156 0 1 791 1335 50 0 0 chrUextra 27105045 27105224 -1899432 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 791 1281 72 0 0 chrUextra 27105227 27105477 -1899179 + (TAGA)n Simple_repeat Simple_repeat 1 250 0 1 791 1697 68 34 8 chrUextra 27105579 27105815 -1898841 + IDEFIX_I LTR Gypsy 2373 2614 -3014 1 791 1422 86 22 14 chrUextra 27105805 27106028 -1898628 + IDEFIX_I LTR Gypsy 3227 3451 -2177 1 791 1004 81 13 7 chrUextra 27106019 27106168 -1898488 + IDEFIX_I LTR Gypsy 3677 3826 -1802 1 791 2885 169 10 10 chrUextra 27106277 27106857 -1897799 + SAR_DM Satellite Satellite 427 1006 -466 1 791 2676 160 16 19 chrUextra 27107646 27108924 -1895732 - DMSAT6 Satellite Satellite -87 1274 1 1 791 558 0 0 0 chrUextra 27109024 27109086 -1895570 + (GAGAA)n Simple_repeat Simple_repeat 4 65 0 1 791 2616 91 20 28 chrUextra 27109756 27110300 -1894356 + DMSAT6 Satellite Satellite 1 539 0 1 791 2876 162 14 5 chrUextra 27110423 27110988 -1893668 + SAR_DM Satellite Satellite 326 895 -577 1 791 2856 174 8 10 chrUextra 27111092 27111680 -1892976 - SAR_DM Satellite Satellite -549 923 337 1 791 5085 34 0 0 chrUextra 27111780 27112369 -1892287 + R1_DM LINE R1 2754 3342 -2014 1 791 2756 82 7 33 chrUextra 27112474 27113058 -1891598 + DMSAT6 Satellite Satellite 1 568 -147 1 791 1649 167 14 7 chrUextra 27113159 27113747 -1890909 - SAR_DM Satellite Satellite -645 591 1 1 791 5319 2 5 3 chrUextra 27113847 27114436 -1890220 + LSU-rRNA_Dme rRNA rRNA 1085 1674 -2226 1 791 2641 90 25 15 chrUextra 27114536 27115125 -1889531 + DMSAT6 Satellite Satellite 1 595 -69 1 791 23 33 0 0 chrUextra 27116356 27116386 -1888270 + AT_rich Low_complexity Low_complexity 1 30 0 1 791 2510 175 39 29 chrUextra 27116604 27117192 -1887464 - SAR_DM Satellite Satellite -371 1101 508 1 791 1774 10 0 0 chrUextra 27117303 27117501 -1887155 - Copia2_LTR_DM LTR Copia 0 198 1 1 791 311 60 19 74 chrUextra 27117584 27117638 -1887018 + G4_DM LINE Jockey 1817 1867 -1989 1 791 2689 182 19 7 chrUextra 27117981 27118566 -1886090 + SAR_DM Satellite Satellite 304 895 -577 1 791 3744 50 45 3 chrUextra 27118670 27119259 -1885397 - PROTOP_A DNA P -10 1095 570 1 791 3339 20 3 0 chrUextra 27119359 27119749 -1884907 + FW_DM LINE Jockey 4300 4690 -2 1 791 1311 149 23 0 chrUextra 27119734 27119948 -1884708 + ROVER-I_DM LTR Gypsy 3757 3975 -2609 1 791 1949 0 5 0 chrUextra 27120737 27120947 -1883709 + SSU-rRNA_Dme rRNA rRNA 1785 1995 0 1 791 21 89 0 0 chrUextra 27120966 27121022 -1883634 + AT_rich Low_complexity Low_complexity 1 56 0 1 791 5464 0 0 2 chrUextra 27121426 27122015 -1882641 + LSU-rRNA_Dme rRNA rRNA 2673 3260 -640 1 791 2556 98 17 24 chrUextra 27122115 27122704 -1881952 - DMSAT6 Satellite Satellite -3 584 1 1 791 2202 143 8 8 chrUextra 27122804 27123157 -1881499 + Gypsy12_I LTR Gypsy 5194 5546 0 1 791 1464 131 5 0 chrUextra 27123157 27123379 -1881277 + Gypsy12A_LTR LTR Gypsy 1 223 -2057 1 791 5272 2 5 5 chrUextra 27123493 27124082 -1880574 + LSU-rRNA_Dme rRNA rRNA 1116 1704 -2196 1 791 2546 91 25 32 chrUextra 27124183 27124747 -1879909 - DMSAT6 Satellite Satellite -92 559 1 1 791 3597 2 0 2 chrUextra 27124871 27125279 -1879377 + POGO DNA Pogo 1706 2112 -9 1 791 1181 78 0 6 chrUextra 27125279 27125459 -1879197 + (TATTG)n Simple_repeat Simple_repeat 1 179 0 1 791 5275 2 0 0 chrUextra 27125562 27126149 -1878507 - ROO_I LTR Pao -3243 5013 4427 1 791 357 24 0 0 chrUextra 27126938 27126980 -1877676 + (TTCTC)n Simple_repeat Simple_repeat 3 44 0 1 791 963 0 0 0 chrUextra 27128314 27128421 -1876235 + (CAAGA)n Simple_repeat Simple_repeat 5 111 0 1 791 5258 8 0 5 chrUextra 27129002 27129590 -1875066 + LSU-rRNA_Dme rRNA rRNA 749 1333 -2567 1 791 2533 103 30 9 chrUextra 27129693 27130277 -1874379 + DMSAT6 Satellite Satellite 1 596 -15 1 791 5352 2 2 3 chrUextra 27130378 27130966 -1873690 + LSU-rRNA_Dme rRNA rRNA 754 1340 -2560 1 791 2909 168 10 10 chrUextra 27131066 27131654 -1873002 - SAR_DM Satellite Satellite -470 1002 415 1 98 2410 131 9 35 chrUextra 27131773 27132342 -1872314 + DMSAT6 Satellite Satellite 1 553 -3 1 792 2573 167 44 18 chrUextra 27133130 27133702 -1870954 - SAR_DM Satellite Satellite -565 907 321 1 792 1799 64 4 0 chrUextra 27133841 27134074 -1870582 + MDG3_LTR LTR Gypsy 34 267 0 1 792 2269 85 15 12 chrUextra 27134074 27134406 -1870250 + TART LINE telomeric 9689 10021 -4456 1 792 2831 176 10 7 chrUextra 27134510 27135094 -1869562 + SAR_DM Satellite Satellite 246 831 -641 1 792 1801 140 4 0 chrUextra 27135882 27136160 -1868496 - HMSBEAGLE_I LTR Gypsy -826 5703 5425 1 792 2259 108 0 0 chrUextra 27136164 27136470 -1868186 - HMSBEAGLE_I LTR Gypsy -1344 5185 4880 1 792 5015 34 39 0 chrUextra 27136570 27137158 -1867498 + CIRCE LINE Composite 5654 6264 -92 1 792 1013 65 7 22 chrUextra 27137258 27137793 -1866863 + RSP Satellite Satellite 1 527 0 1 792 2810 176 9 3 chrUextra 27137951 27138517 -1866139 - SAR_DM Satellite Satellite -578 894 326 1 792 25 0 0 0 chrUextra 27139154 27139179 -1865477 + AT_rich Low_complexity Low_complexity 1 25 0 1 792 2643 176 11 11 chrUextra 27139322 27139878 -1864778 + SAR_DM Satellite Satellite 434 989 -483 1 792 2514 202 22 5 chrUextra 27140011 27140594 -1864062 - SAR_DM Satellite Satellite -455 1017 425 1 792 5288 0 20 0 chrUextra 27140698 27141286 -1863370 + DOC LINE Jockey 884 1483 -3242 1 792 4977 26 2 0 chrUextra 27141386 27141960 -1862696 - NINJA_I LTR Pao -1402 4609 4035 1 792 1629 14 19 19 chrUextra 27142074 27142287 -1862369 + NTS_DM Other Other 28 240 0 1 792 1880 17 17 17 chrUextra 27142287 27142527 -1862129 + NTS_DM Other Other 1 240 0 1 792 1176 22 0 0 chrUextra 27142527 27142662 -1861994 + NTS_DM Other Other 1 135 -105 1 792 446 0 62 46 chrUextra 27142762 27142827 -1861829 + NTS_DM Other Other 175 240 0 1 792 1869 21 17 17 chrUextra 27142827 27143067 -1861589 + NTS_DM Other Other 1 240 0 1 792 1880 17 17 17 chrUextra 27143067 27143307 -1861349 + NTS_DM Other Other 1 240 0 1 792 384 23 0 0 chrUextra 27143307 27143350 -1861306 + NTS_DM Other Other 1 43 -197 1 792 2580 111 15 12 chrUextra 27143451 27144037 -1860619 + DMSAT6 Satellite Satellite 1 587 -155 1 792 2541 104 22 14 chrUextra 27144139 27144725 -1859931 - DMSAT6 Satellite Satellite -90 590 1 1 792 2609 81 12 62 chrUextra 27144826 27145411 -1859245 + DMSAT6 Satellite Satellite 1 555 -62 1 792 5386 0 3 3 chrUextra 27146202 27146790 -1857866 + SSU-rRNA_Dme rRNA rRNA 765 1352 -643 1 792 379 9 0 134 chrUextra 27146890 27147017 -1857639 + (TTTTTA)n Simple_repeat Simple_repeat 3 112 0 1 792 1624 244 44 65 chrUextra 27147596 27148166 -1856490 + Gypsy12_LTR LTR Gypsy 309 866 -1470 1 792 5241 19 0 0 chrUextra 27148266 27148854 -1855802 - R1_DM LINE R1 -2869 2487 1900 1 792 2490 181 10 29 chrUextra 27149642 27150228 -1854428 + SAR_DM Satellite Satellite 516 1090 -382 1 792 5449 2 3 0 chrUextra 27150330 27150918 -1853738 - LSU-rRNA_Dme rRNA rRNA -74 3826 3237 1 792 2677 184 12 7 chrUextra 27151023 27151599 -1853057 + SAR_DM Satellite Satellite 371 949 -523 1 792 4612 0 5 80 chrUextra 27151706 27152294 -1852362 + LSU-rRNA_Dme rRNA rRNA 1298 1841 -2059 1 792 5238 20 0 0 chrUextra 27153082 27153670 -1850986 + R1_DM LINE R1 1922 2509 -2847 1 792 968 39 0 0 chrUextra 27153912 27154039 -1850617 + G2_DM LINE Jockey 2972 3098 -4 1 792 5111 24 0 8 chrUextra 27154458 27155045 -1849611 + Gypsy3_I LTR Gypsy 3000 3581 -2596 1 792 2104 162 39 25 chrUextra 27155145 27155732 -1848924 + SAR_DM Satellite Satellite 1 594 -378 1 792 2563 185 27 14 chrUextra 27155832 27156419 -1848237 - SAR_DM Satellite Satellite -640 832 238 1 792 5338 12 2 0 chrUextra 27156519 27157106 -1847550 + DOC2_DM LINE Jockey 2242 2829 -1964 1 792 2731 182 14 5 chrUextra 27157212 27157793 -1846863 + SAR_DM Satellite Satellite 229 814 -658 1 792 2420 10 61 0 chrUextra 27157893 27158188 -1846468 - IDEFIX_LTR LTR Gypsy -281 313 1 1 792 1672 59 36 36 chrUextra 27158188 27158480 -1846176 - BATUMI_I LTR Pao -7291 672 381 1 792 520 139 55 18 chrUextra 27158612 27158838 -1845818 + CT-rich Low_complexity Low_complexity 1 234 0 1 792 568 156 60 3 chrUextra 27158858 27159166 -1845490 + CT-rich Low_complexity Low_complexity 1 325 0 1 792 2213 233 10 5 chrUextra 27159267 27159854 -1844802 - SAR_DM Satellite Satellite -684 788 199 1 792 5315 10 2 0 chrUextra 27159954 27160541 -1844115 - R1_DM LINE R1 -418 4938 4351 1 792 1307 68 0 5 chrUextra 27160644 27160867 -1843789 + (CAAGA)n Simple_repeat Simple_repeat 1 221 0 1 792 5363 2 0 2 chrUextra 27161328 27161915 -1842741 + R1_DM LINE R1 3055 3640 -1716 1 792 32 0 0 0 chrUextra 27162255 27162287 -1842369 + AT_rich Low_complexity Low_complexity 1 32 0 1 792 1635 11 6 0 chrUextra 27162419 27162602 -1842054 + SSU-rRNA_Dme rRNA rRNA 1 184 -1811 1 792 5375 0 0 2 chrUextra 27162702 27163289 -1841367 - R1_DM LINE R1 -3425 1931 1346 1 792 1924 0 0 0 chrUextra 27163389 27163593 -1841063 + SSU-rRNA_Dme rRNA rRNA 1792 1995 0 1 792 21 89 0 0 chrUextra 27163612 27163668 -1840988 + AT_rich Low_complexity Low_complexity 1 56 0 1 792 2311 189 30 26 chrUextra 27164076 27164647 -1840009 + SAR_DM Satellite Satellite 546 1118 -354 1 792 301 167 59 59 chrUextra 27164561 27164663 -1839993 - XDMR_DM Unknown Unknown 0 360 259 1 792 951 0 0 0 chrUextra 27164763 27164864 -1839792 - LSU-rRNA_Dme rRNA rRNA -2012 1888 1788 1 792 3952 5 5 5 chrUextra 27164905 27165350 -1839306 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1347 1 792 2784 162 30 14 chrUextra 27166142 27166718 -1837938 + SAR_DM Satellite Satellite 353 937 -535 1 792 999 90 7 17 chrUextra 27166824 27167411 -1837245 + RSP Satellite Satellite 1 581 0 1 792 2270 107 10 41 chrUextra 27167511 27168097 -1836559 + DMSAT6 Satellite Satellite 1 567 -130 1 792 1148 78 11 0 chrUextra 27168198 27168560 -1836096 + (CTATT)n Simple_repeat Simple_repeat 1 366 0 1 792 216 67 0 0 chrUextra 27168572 27168602 -1836054 + (TTATA)n Simple_repeat Simple_repeat 4 33 0 1 792 1277 56 6 0 chrUextra 27168602 27168781 -1835875 + (CTATT)n Simple_repeat Simple_repeat 1 180 0 1 792 2004 200 44 7 chrUextra 27168885 27169449 -1835207 - SAR_DM Satellite Satellite -555 917 333 1 792 2326 97 14 48 chrUextra 27170259 27170845 -1833811 + DMSAT6 Satellite Satellite 1 566 -97 1 792 4554 7 2 10 chrUextra 27170950 27171533 -1833123 - MAX_I LTR Pao -6871 1043 466 1 792 1212 17 27 22 chrUextra 27171633 27171818 -1832838 + NTS_DM Other Other 55 240 0 1 792 1850 4 17 13 chrUextra 27171818 27172057 -1832599 + NTS_DM Other Other 1 240 0 1 792 1350 6 0 0 chrUextra 27172057 27172220 -1832436 + NTS_DM Other Other 1 163 -77 1 792 4088 38 9 0 chrUextra 27172333 27172867 -1831789 + DOC2_DM LINE Jockey 364 902 -3891 1 792 2361 108 17 17 chrUextra 27173007 27173590 -1831066 - DMSAT6 Satellite Satellite -23 582 1 1 792 2496 164 14 12 chrUextra 27173694 27174256 -1830400 + SAR_DM Satellite Satellite 514 1076 -396 1 792 834 165 6 0 chrUextra 27174382 27174552 -1830104 + SAR_DM Satellite Satellite 616 786 -686 1 792 2395 92 24 15 chrUextra 27175071 27175655 -1829001 + DMSAT6 Satellite Satellite 1 588 -152 1 792 4876 12 0 0 chrUextra 27175755 27176330 -1828326 + DMRT1B LINE R1 1947 2521 -2662 1 792 4570 16 56 14 chrUextra 27176442 27177029 -1827627 + FW_DM LINE Jockey 1797 2408 -2284 1 792 2333 179 17 17 chrUextra 27177132 27177713 -1826943 + SAR_DM Satellite Satellite 481 1061 -411 1 792 2649 57 6 0 chrUextra 27177816 27178170 -1826486 + TART LINE telomeric 2119 2474 -12003 1 792 1352 85 10 0 chrUextra 27178169 27178370 -1826286 - TART LINE telomeric -6495 7982 7780 1 792 2427 171 14 27 chrUextra 27178503 27179087 -1825569 + SAR_DM Satellite Satellite 536 1111 -361 1 792 1559 6 0 0 chrUextra 27179877 27180056 -1824600 + LSU-rRNA_Dme rRNA rRNA 3722 3900 0 1 792 22 56 0 0 chrUextra 27180128 27180164 -1824492 + AT_rich Low_complexity Low_complexity 1 36 0 1 792 235 175 0 0 chrUextra 27180169 27180209 -1824447 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 246 150 0 0 chrUextra 27180261 27180301 -1824355 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 246 150 0 0 chrUextra 27180353 27180393 -1824263 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 4929 2 5 3 chrUextra 27180566 27181151 -1823505 + LSU-rRNA_Dme rRNA rRNA 1172 1757 -2143 1 792 4980 10 0 0 chrUextra 27181251 27181835 -1822821 - Gypsy4_I LTR Gypsy -3934 2354 1771 1 792 597 6 0 136 chrUextra 27181939 27182145 -1822511 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 1 792 555 87 22 92 chrUextra 27182108 27182404 -1822252 + A-rich Low_complexity Low_complexity 1 275 0 1 792 4925 19 3 0 chrUextra 27182625 27183212 -1821444 - Copia2_I LTR Copia -1690 2472 1884 1 792 4480 14 0 2 chrUextra 27183312 27183899 -1820757 + DM176_I LTR Gypsy 5728 6313 -107 1 792 364 217 106 0 chrUextra 27184798 27185193 -1819463 + (CAAGA)n Simple_repeat Simple_repeat 1 436 0 1 792 326 214 107 0 chrUextra 27185083 27185242 -1819414 + (AATAG)n Simple_repeat Simple_repeat 5 180 0 1 792 2591 179 7 10 chrUextra 27185372 27185958 -1818698 - SAR_DM Satellite Satellite -467 1005 422 1 792 434 100 0 0 chrUextra 27186058 27186128 -1818528 - ARS406_DM Unknown Unknown -283 70 1 1 792 2504 185 9 7 chrUextra 27186066 27186644 -1818012 + SAR_DM Satellite Satellite 224 802 -670 1 792 3013 6 0 3 chrUextra 27186744 27187108 -1817548 + FW_DM LINE Jockey 4330 4692 0 1 792 895 104 97 0 chrUextra 27187145 27187289 -1817367 - DNAREP1_DM LINE Penelope -6 588 431 1 792 4704 7 12 17 chrUextra 27187430 27188016 -1816640 - QUASIMODO_I LTR Gypsy -5316 744 162 1 792 4985 3 0 2 chrUextra 27188116 27188702 -1815954 - R1_DM LINE R1 -3149 2207 1623 1 792 2231 207 14 5 chrUextra 27188802 27189385 -1815271 - SAR_DM Satellite Satellite -402 1070 483 1 792 211 184 0 0 chrUextra 27189562 27189600 -1815056 + (CGTG)n Simple_repeat Simple_repeat 4 41 0 1 792 29 28 0 0 chrUextra 27189791 27189827 -1814829 + AT_rich Low_complexity Low_complexity 1 36 0 1 792 4827 19 12 0 chrUextra 27190174 27190760 -1813896 - R1_DM LINE R1 -2842 2514 1922 1 792 2473 160 30 13 chrUextra 27190860 27192130 -1812526 - DMSAT6 Satellite Satellite -113 1291 1 1 792 1616 18 18 18 chrUextra 27192232 27192458 -1812198 + NTS_DM Other Other 15 240 0 1 792 1643 38 17 17 chrUextra 27192458 27192698 -1811958 + NTS_DM Other Other 1 240 0 1 792 895 58 0 0 chrUextra 27192698 27192818 -1811838 + NTS_DM Other Other 1 120 -120 1 792 4244 0 0 48 chrUextra 27192918 27193460 -1811196 - LSU-rRNA_Dme rRNA rRNA -3384 516 1 1 792 2234 162 25 10 chrUextra 27193604 27194120 -1810536 - ROVER-I_DM LTR Gypsy -72 6512 5989 1 792 33 56 0 0 chrUextra 27194322 27194376 -1810280 + AT_rich Low_complexity Low_complexity 1 54 0 1 792 1485 184 10 8 chrUextra 27194976 27195561 -1809095 - SAR_DM Satellite Satellite -539 585 1 1 792 2563 180 8 5 chrUextra 27195662 27196248 -1808408 + SAR_DM Satellite Satellite 385 972 -500 1 792 5006 0 2 5 chrUextra 27196348 27196934 -1807722 + SSU-rRNA_Dme rRNA rRNA 780 1363 -632 1 792 4822 5 19 0 chrUextra 27197034 27197620 -1807036 - QUASIMODO_I LTR Gypsy -3153 2907 2311 1 792 2953 0 3 0 chrUextra 27199092 27199433 -1805223 + R1_DM LINE R1 5015 5356 0 1 792 395 21 0 0 chrUextra 27199431 27199478 -1805178 + LSU-rRNA_Dme rRNA rRNA 2640 2686 -1214 1 792 1596 15 0 5 chrUextra 27199475 27199678 -1804978 + R1_DM LINE R1 852 1053 -4303 1 792 711 0 0 0 chrUextra 27199778 27199857 -1804799 + (GAGAA)n Simple_repeat Simple_repeat 4 82 0 1 792 468 0 0 0 chrUextra 27200998 27201050 -1803606 + (GAGAA)n Simple_repeat Simple_repeat 2 53 0 1 792 4788 15 0 0 chrUextra 27201150 27201736 -1802920 + ROO_I LTR Pao 3249 3834 -4422 1 792 21 57 0 0 chrUextra 27202344 27202379 -1802277 + AT_rich Low_complexity Low_complexity 1 35 0 1 792 1213 19 0 7 chrUextra 27202530 27202685 -1801971 - NTS_DM Other Other -86 154 1 1 792 1767 13 17 17 chrUextra 27202685 27202925 -1801731 - NTS_DM Other Other 0 240 1 1 792 1270 11 27 16 chrUextra 27202925 27203108 -1801548 - NTS_DM Other Other 0 240 56 1 792 2367 25 0 76 chrUextra 27203208 27203549 -1801107 - LSU-rRNA_Dme rRNA rRNA -3585 315 1 1 792 2091 172 9 4 chrUextra 27204590 27205045 -1799611 + SAR_DM Satellite Satellite 326 782 -690 1 792 716 68 0 0 chrUextra 27205063 27205166 -1799490 - ARS406_DM Unknown Unknown -181 172 70 1 792 2472 86 12 14 chrUextra 27205952 27206520 -1798136 + DMSAT6 Satellite Satellite 1 567 -64 1 792 870 9 0 27 chrUextra 27206680 27206792 -1797864 + NTS_DM Other Other 25 133 -107 1 792 1252 18 0 6 chrUextra 27206792 27206957 -1797699 + NTS_DM Other Other 38 201 -39 1 792 870 9 0 27 chrUextra 27207009 27207121 -1797535 + NTS_DM Other Other 25 133 -107 1 792 820 19 0 0 chrUextra 27207121 27207224 -1797432 + NTS_DM Other Other 38 140 -100 1 792 253 191 43 43 chrUextra 27208793 27208908 -1795748 + T-rich Low_complexity Low_complexity 3 117 0 1 792 208 273 47 8 chrUextra 27209078 27209207 -1795449 + T-rich Low_complexity Low_complexity 2 135 0 1 792 390 20 20 0 chrUextra 27209382 27209432 -1795224 + ARS406_DM Unknown Unknown 139 189 -164 1 792 1654 180 3 6 chrUextra 27209389 27209752 -1794904 - SAR_DM Satellite Satellite -615 857 496 1 792 1025 133 5 15 chrUextra 27209767 27209965 -1794691 - SAR_DM Satellite Satellite -569 903 708 1 792 5088 0 0 2 chrUextra 27210068 27210654 -1794002 + LSU-rRNA_Dme rRNA rRNA 2702 3286 -614 1 792 4447 38 19 10 chrUextra 27210754 27211340 -1793316 + DOC2_DM LINE Jockey 1441 2031 -2762 1 792 2015 77 3 53 chrUextra 27211440 27212003 -1792653 - DMSAT6 Satellite Satellite -65 534 1 1 792 4872 2 0 0 chrUextra 27212126 27212700 -1791956 - LSU-rRNA_Dme rRNA rRNA -3106 794 221 1 792 2311 186 24 10 chrUextra 27212812 27213398 -1791258 + SAR_DM Satellite Satellite 523 1116 -356 1 792 253 86 0 0 chrUextra 27213498 27213546 -1791110 + TAHRE LINE telomeric 10411 10443 -20 1 792 1884 162 31 39 chrUextra 27213548 27214068 -1790588 + HETA LINE telomeric 115 630 -5451 1 792 1356 32 0 0 chrUextra 27214184 27214436 -1790220 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 792 1222 17 27 22 chrUextra 27214870 27215055 -1789601 + NTS_DM Other Other 55 240 0 1 792 1734 21 17 17 chrUextra 27215055 27215295 -1789361 + NTS_DM Other Other 1 240 0 1 792 1263 19 0 6 chrUextra 27215295 27215456 -1789200 + NTS_DM Other Other 1 160 -80 1 792 2647 166 10 12 chrUextra 27215556 27216141 -1788515 - SAR_DM Satellite Satellite -471 1001 418 1 792 2204 117 2 45 chrUextra 27216243 27216827 -1787829 - DMSAT6 Satellite Satellite -117 559 1 1 792 2658 173 8 10 chrUextra 27216927 27217512 -1787144 + SAR_DM Satellite Satellite 433 1016 -456 1 792 3829 40 3 65 chrUextra 27217613 27218197 -1786459 - BATUMI_I LTR Pao -5020 2943 2396 1 792 246 150 0 0 chrUextra 27219029 27219069 -1785587 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 225 125 0 24 chrUextra 27219112 27219153 -1785503 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 22 56 0 0 chrUextra 27219166 27219202 -1785454 + AT_rich Low_complexity Low_complexity 1 36 0 1 792 870 9 0 27 chrUextra 27219228 27219340 -1785316 + NTS_DM Other Other 25 133 -107 1 792 1252 18 0 6 chrUextra 27219340 27219505 -1785151 + NTS_DM Other Other 38 201 -39 1 792 385 12 0 138 chrUextra 27220356 27220545 -1784111 + (TCTCTG)n Simple_repeat Simple_repeat 6 168 0 1 792 1498 36 0 7 chrUextra 27220629 27220937 -1783719 + (GAGAA)n Simple_repeat Simple_repeat 1 305 0 1 792 2293 175 9 24 chrUextra 27221037 27221617 -1783039 + SAR_DM Satellite Satellite 477 1047 -425 1 792 34 24 0 0 chrUextra 27222010 27222051 -1782605 + AT_rich Low_complexity Low_complexity 1 41 0 1 792 2615 172 8 8 chrUextra 27222407 27222992 -1781664 - SAR_DM Satellite Satellite -501 971 387 1 792 288 0 0 0 chrUextra 27223092 27223131 -1781525 + NTS_DM Other Other 95 133 -107 1 792 1252 18 0 6 chrUextra 27223131 27223296 -1781360 + NTS_DM Other Other 38 201 -39 1 792 870 9 0 27 chrUextra 27223348 27223460 -1781196 + NTS_DM Other Other 25 133 -107 1 792 1222 18 0 12 chrUextra 27223460 27223626 -1781030 + NTS_DM Other Other 38 201 -39 1 792 763 28 0 9 chrUextra 27223777 27223885 -1780771 + G2_DM LINE Jockey 2989 3095 -7 1 792 3512 58 0 0 chrUextra 27223885 27224351 -1780305 - G2_DM LINE Jockey -32 3070 2605 1 792 1056 164 0 3 chrUextra 27224462 27224757 -1779899 + (TATG)n Simple_repeat Simple_repeat 1 293 0 1 792 1158 169 0 0 chrUextra 27224756 27225047 -1779609 + (TA)n Simple_repeat Simple_repeat 1 291 0 1 792 1080 0 0 0 chrUextra 27225147 27225267 -1779389 + (CAAAA)n Simple_repeat Simple_repeat 1 120 0 1 792 1432 19 0 10 chrUextra 27225267 27225475 -1779181 + (CACAA)n Simple_repeat Simple_repeat 1 206 0 1 792 1481 36 0 13 chrUextra 27225495 27225732 -1778924 + (CACAA)n Simple_repeat Simple_repeat 1 233 0 1 792 1241 19 0 0 chrUextra 27225832 27225991 -1778665 + ACCORD2_I LTR Gypsy 4023 4181 -3031 1 792 3296 21 21 2 chrUextra 27225989 27226417 -1778239 + ACCORD2_I LTR Gypsy 3423 3858 -3354 1 792 2113 216 31 27 chrUextra 27226522 27227101 -1777555 + SAR_DM Satellite Satellite 1 581 -203 1 792 4804 2 0 2 chrUextra 27227202 27227756 -1776900 - LSU-rRNA_Dme rRNA rRNA -708 3192 2640 1 792 264 0 0 0 chrUextra 27227754 27227785 -1776871 - R1_DM LINE R1 0 5356 5326 1 792 1901 4 0 0 chrUextra 27227887 27228123 -1776533 + DOC LINE Jockey 4490 4725 0 1 792 180 0 0 0 chrUextra 27228123 27228143 -1776513 + (A)n Simple_repeat Simple_repeat 1 20 0 1 792 857 270 6 6 chrUextra 27228151 27228468 -1776188 + Copia_I LTR Copia 1533 1849 -2744 1 792 4942 15 0 0 chrUextra 27228572 27229157 -1775499 - STALKER4_I LTR Gypsy -2268 4262 3678 1 792 4960 5 0 3 chrUextra 27229942 27230524 -1774132 + STALKER4_I LTR Gypsy 3820 4399 -2131 1 792 4760 0 0 0 chrUextra 27231312 27231897 -1772759 - DM297_I LTR Gypsy -4647 1520 936 1 792 1192 81 0 0 chrUextra 27231997 27232170 -1772486 + BEL_LTR LTR Pao 189 361 0 1 792 3349 25 17 0 chrUextra 27232174 27232582 -1772074 + BEL_I LTR Pao 2 416 -4988 1 792 4816 32 0 0 chrUextra 27232682 27233267 -1771389 + BATUMI_I LTR Pao 3667 4251 -3712 1 792 2632 168 19 10 chrUextra 27233368 27233952 -1770704 - SAR_DM Satellite Satellite -478 994 406 1 792 4754 22 0 5 chrUextra 27234052 27234637 -1770019 + STALKER4_I LTR Gypsy 4358 4939 -1591 1 792 379 247 0 0 chrUextra 27235893 27235986 -1768670 + Copia2_I LTR Copia 140 232 -3930 1 792 21 95 0 0 chrUextra 27236261 27236324 -1768332 + AT_rich Low_complexity Low_complexity 1 63 0 1 792 2694 0 0 70 chrUextra 27236337 27236692 -1767964 + LSU-rRNA_Dme rRNA rRNA 2 331 -3569 1 792 2674 162 12 10 chrUextra 27236794 27237374 -1767282 - SAR_DM Satellite Satellite -514 958 378 1 792 4983 12 2 0 chrUextra 27237477 27238062 -1766594 + BS LINE Jockey 2145 2730 -2396 1 792 368 235 0 19 chrUextra 27238164 27238268 -1766388 - HETRP_DM Satellite Satellite -222 1650 1549 1 792 192 40 0 0 chrUextra 27238268 27238293 -1766363 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 792 628 186 7 28 chrUextra 27238451 27238595 -1766061 - HETRP_DM Satellite Satellite -203 1669 1529 1 792 1578 16 0 0 chrUextra 27238847 27239210 -1765446 + (GAGAA)n Simple_repeat Simple_repeat 1 363 0 1 792 2607 154 28 12 chrUextra 27239550 27240117 -1764539 - SAR_DM Satellite Satellite -470 1002 427 1 792 5048 3 2 0 chrUextra 27240902 27241487 -1763169 - LSU-rRNA_Dme rRNA rRNA -1446 2454 1869 1 792 2479 173 17 12 chrUextra 27241588 27242172 -1762484 + SAR_DM Satellite Satellite 439 1025 -447 1 792 4760 29 2 0 chrUextra 27242272 27242857 -1761799 - R1_DM LINE R1 -3349 2007 1422 1 792 2193 98 26 33 chrUextra 27242957 27243542 -1761114 + DMSAT6 Satellite Satellite 1 581 -89 1 792 2129 200 12 21 chrUextra 27243644 27244220 -1760436 + SAR_DM Satellite Satellite 549 1119 -353 1 792 5025 5 0 0 chrUextra 27244327 27244912 -1759744 + R1_DM LINE R1 4299 4883 -473 1 792 2680 174 3 12 chrUextra 27245015 27245596 -1759060 + SAR_DM Satellite Satellite 481 1056 -416 1 792 2235 216 17 22 chrUextra 27245699 27246280 -1758376 + SAR_DM Satellite Satellite 1 578 -417 1 792 2357 187 7 19 chrUextra 27246380 27246964 -1757692 - SAR_DM Satellite Satellite -357 1115 539 1 792 3134 27 10 7 chrUextra 27247064 27247477 -1757179 - BATUMI_I LTR Pao -1123 6840 6427 1 792 1070 40 0 0 chrUextra 27247500 27247648 -1757008 + BATUMI_I LTR Pao 7303 7450 -513 1 792 4732 21 17 0 chrUextra 27247748 27248331 -1756325 + PROTOP DNA P 1010 1602 -2878 1 792 2416 76 19 7 chrUextra 27248432 27249016 -1755640 - DMSAT6 Satellite Satellite -82 591 1 1 792 3873 33 0 58 chrUextra 27249800 27250384 -1754272 + MAX_I LTR Pao 7165 7714 -200 1 792 32 0 0 0 chrUextra 27250484 27250516 -1754140 + AT_rich Low_complexity Low_complexity 1 32 0 1 792 3648 2 0 2 chrUextra 27250648 27251068 -1753588 + SSU-rRNA_Dme rRNA rRNA 1 419 -1576 1 792 415 0 0 137 chrUextra 27251169 27251308 -1753348 + (CAAAAA)n Simple_repeat Simple_repeat 4 123 0 1 792 1276 6 0 12 chrUextra 27252536 27252699 -1751957 - NTS_DM Other Other -79 161 1 1 792 1801 8 17 17 chrUextra 27252699 27252939 -1751717 - NTS_DM Other Other 0 240 1 1 792 1177 23 22 22 chrUextra 27252939 27253120 -1751536 - NTS_DM Other Other 0 240 60 1 792 4866 12 2 0 chrUextra 27253220 27253804 -1750852 - FW_DM LINE Jockey -2583 2109 1525 1 792 1533 23 0 0 chrUextra 27253904 27254214 -1750442 + (AATAG)n Simple_repeat Simple_repeat 1 310 0 1 792 1428 58 0 0 chrUextra 27254246 27254488 -1750168 + (AATAG)n Simple_repeat Simple_repeat 1 242 0 1 792 2557 75 25 11 chrUextra 27254588 27255153 -1749503 - DMSAT6 Satellite Satellite -113 572 1 1 792 2575 185 10 3 chrUextra 27255958 27256539 -1748117 + SAR_DM Satellite Satellite 278 862 -610 1 792 3754 104 57 0 chrUextra 27256640 27257224 -1747432 + Gypsy_I LTR Gypsy 4184 4800 -1707 1 792 34 24 0 0 chrUextra 27257383 27257424 -1747232 + AT_rich Low_complexity Low_complexity 1 41 0 1 792 2665 162 10 9 chrUextra 27258011 27258590 -1746066 - SAR_DM Satellite Satellite -615 857 278 1 792 2650 158 10 12 chrUextra 27258694 27259276 -1745380 - SAR_DM Satellite Satellite -499 973 393 1 792 32 0 0 0 chrUextra 27259712 27259744 -1744912 + AT_rich Low_complexity Low_complexity 1 32 0 1 792 696 0 0 12 chrUextra 27259876 27259960 -1744696 + SSU-rRNA_Dme rRNA rRNA 1 83 -1912 1 792 34 24 0 0 chrUextra 27260198 27260239 -1744417 + AT_rich Low_complexity Low_complexity 1 41 0 1 792 1269 94 0 6 chrUextra 27260744 27261252 -1743404 + (TAGA)n Simple_repeat Simple_repeat 1 505 0 1 792 528 65 0 0 chrUextra 27261252 27261328 -1743328 + (ATCG)n Simple_repeat Simple_repeat 4 80 0 1 792 4638 10 2 0 chrUextra 27261428 27262012 -1742644 + QUASIMODO_I LTR Gypsy 4480 5064 -996 1 792 4811 15 2 2 chrUextra 27262112 27262696 -1741960 - R1_DM LINE R1 -1163 4193 3610 1 12 2468 171 48 10 chrUextra 27262796 27263376 -1741280 - SAR_DM Satellite Satellite -444 1028 427 1 793 30 27 0 0 chrUextra 27263762 27263799 -1740857 + AT_rich Low_complexity Low_complexity 1 37 0 1 793 210 37 0 0 chrUextra 27263916 27263943 -1740713 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 793 1761 14 0 0 chrUextra 27264187 27264399 -1740257 - R2_DM LINE R2 0 3607 3396 1 793 3036 0 0 3 chrUextra 27264396 27264748 -1739908 - LSU-rRNA_Dme rRNA rRNA -1321 2579 2229 1 793 2452 174 24 35 chrUextra 27264850 27266116 -1738540 - DMSAT6 Satellite Satellite -104 1251 1 1 793 4400 2 0 0 chrUextra 27266216 27266720 -1737936 - LSU-rRNA_Dme rRNA rRNA -1609 2291 1788 1 793 258 0 0 28 chrUextra 27266764 27266800 -1737856 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1754 1 793 2612 164 14 9 chrUextra 27266908 27267475 -1737181 + SAR_DM Satellite Satellite 334 903 -569 1 793 920 73 7 20 chrUextra 27267619 27268168 -1736488 - RSP Satellite Satellite 0 542 1 1 793 4913 14 0 0 chrUextra 27268268 27268852 -1735804 - R1_DM LINE R1 -2871 2485 1902 1 793 2570 74 10 57 chrUextra 27268952 27269536 -1735120 - DMSAT6 Satellite Satellite -4 557 1 1 793 4998 3 0 3 chrUextra 27269636 27270220 -1734436 + SSU-rRNA_Dme rRNA rRNA 598 1179 -816 1 793 2405 175 13 16 chrUextra 27270320 27270871 -1733785 + SAR_DM Satellite Satellite 508 1056 -416 1 793 297 0 0 0 chrUextra 27270871 27270904 -1733752 + (T)n Simple_repeat Simple_repeat 1 33 0 1 793 295 144 123 12 chrUextra 27271689 27271851 -1732805 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 793 341 153 108 0 chrUextra 27272161 27272272 -1732384 + (TCTG)n Simple_repeat Simple_repeat 2 124 0 1 793 4878 9 10 2 chrUextra 27272372 27272956 -1731700 + Copia2_I LTR Copia 677 1265 -2897 1 793 4895 9 0 3 chrUextra 27273056 27273640 -1731016 - R1_DM LINE R1 -8 5348 4767 1 793 1127 0 0 0 chrUextra 27273740 27273871 -1730785 - NTS_DM Other Other -109 131 1 1 793 1825 8 17 13 chrUextra 27273871 27274110 -1730546 - NTS_DM Other Other 0 240 1 1 793 1460 33 19 19 chrUextra 27274110 27274324 -1730332 - NTS_DM Other Other 0 240 27 1 793 268 82 20 0 chrUextra 27274424 27274473 -1730183 - HMSBEAGLE_I LTR Gypsy -4134 2395 2346 1 793 3741 103 0 2 chrUextra 27274463 27275005 -1729651 - HMSBEAGLE_I LTR Gypsy -4710 1819 1279 1 793 423 20 0 0 chrUextra 27275107 27275158 -1729498 - BATUMI_I LTR Pao -7912 51 1 1 793 1771 53 37 26 chrUextra 27275158 27275427 -1729229 - BATUMI_LTR LTR Pao 0 272 1 1 793 779 0 0 11 chrUextra 27275790 27275882 -1728774 + (ACATG)n Simple_repeat Simple_repeat 4 94 0 1 793 1620 0 0 2 chrUextra 27275942 27276373 -1728283 + (AGATG)n Simple_repeat Simple_repeat 1 429 0 1 793 4990 5 0 0 chrUextra 27276473 27277056 -1727600 + R1_DM LINE R1 3197 3779 -1577 1 793 5325 0 3 3 chrUextra 27277157 27277739 -1726917 - SSU-rRNA_Dme rRNA rRNA -668 1327 746 1 793 2448 166 29 35 chrUextra 27277842 27278421 -1726235 + SAR_DM Satellite Satellite 528 1103 -369 1 793 4951 31 10 0 chrUextra 27278522 27279105 -1725551 + R1_DM LINE R1 1878 2466 -2890 1 793 534 119 36 0 chrUextra 27279245 27279329 -1725327 - NTS_DM Other Other -150 90 4 1 793 1359 6 0 24 chrUextra 27279439 27279605 -1725051 - NTS_DM Other Other -78 162 1 1 793 1426 6 22 16 chrUextra 27279605 27279788 -1724868 - NTS_DM Other Other 0 240 57 1 793 5301 2 0 2 chrUextra 27279888 27280471 -1724185 - HETA LINE telomeric -3967 2114 1533 1 793 4466 6 0 2 chrUextra 27280662 27281154 -1723502 + DMRT1B LINE R1 1 491 -4692 1 793 2405 210 10 12 chrUextra 27281254 27281837 -1722819 + SAR_DM Satellite Satellite 446 1027 -445 1 793 915 260 26 19 chrUextra 27281942 27282252 -1722404 - XDMR_DM Unknown Unknown -43 317 6 1 793 3724 263 45 43 chrUextra 27281986 27283196 -1721460 + SAR_DM Satellite Satellite 57 1269 -203 1 793 5442 0 2 0 chrUextra 27283303 27283886 -1720770 + SSU-rRNA_Dme rRNA rRNA 368 951 -1044 1 793 5175 17 2 0 chrUextra 27283986 27284569 -1720087 + R1_DM LINE R1 4075 4658 -698 1 793 2831 163 64 3 chrUextra 27284673 27285252 -1719404 - SAR_DM Satellite Satellite -620 852 239 1 793 2393 178 20 27 chrUextra 27285353 27285935 -1718721 + SAR_DM Satellite Satellite 1 578 -378 1 793 225 154 0 0 chrUextra 27287063 27287102 -1717554 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 793 246 296 20 20 chrUextra 27287450 27287550 -1717106 - Copia_I LTR Copia -357 4236 4137 1 793 228 330 34 8 chrUextra 27287533 27287652 -1717004 - Copia2_I LTR Copia -283 3879 3758 1 793 23 68 0 0 chrUextra 27288796 27288840 -1715816 + AT_rich Low_complexity Low_complexity 1 44 0 1 793 2994 158 11 7 chrUextra 27289454 27290021 -1714635 - SAR_DM Satellite Satellite -535 937 369 1 793 202 265 0 0 chrUextra 27290152 27290201 -1714455 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 793 401 85 73 0 chrUextra 27290816 27290898 -1713758 + CT-rich Low_complexity Low_complexity 2 89 0 1 793 2818 180 10 5 chrUextra 27291499 27292081 -1712575 - SAR_DM Satellite Satellite -645 827 243 1 793 328 23 0 22 chrUextra 27292182 27292227 -1712429 + LSU-rRNA_Dme rRNA rRNA 1748 1791 -2109 1 793 4617 2 0 0 chrUextra 27292269 27292765 -1711891 + LSU-rRNA_Dme rRNA rRNA 1788 2283 -1617 1 793 1751 174 7 5 chrUextra 27292866 27293448 -1711208 + SAR_DM Satellite Satellite 1 582 -558 1 793 2790 166 17 24 chrUextra 27293548 27294129 -1710527 + SAR_DM Satellite Satellite 373 949 -523 1 793 1301 0 0 7 chrUextra 27294914 27295064 -1709592 + (ATAAG)n Simple_repeat Simple_repeat 1 149 0 1 793 577 6 0 144 chrUextra 27295731 27295939 -1708717 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 1 793 5222 12 0 0 chrUextra 27296280 27296863 -1707793 - MDG3_I LTR Gypsy -2424 2562 1980 1 793 2672 76 3 71 chrUextra 27296965 27297545 -1707111 - DMSAT6 Satellite Satellite -82 541 1 1 793 23 54 0 0 chrUextra 27297647 27297684 -1706972 + AT_rich Low_complexity Low_complexity 1 37 0 1 793 936 9 0 27 chrUextra 27297710 27297822 -1706834 + NTS_DM Other Other 25 133 -107 1 793 1532 20 20 20 chrUextra 27297822 27298025 -1706631 + NTS_DM Other Other 38 240 0 1 793 1680 25 0 5 chrUextra 27298025 27298227 -1706429 + NTS_DM Other Other 1 201 -39 1 793 2813 174 9 12 chrUextra 27299009 27299589 -1705067 - SAR_DM Satellite Satellite -470 1002 425 1 793 371 24 0 0 chrUextra 27299691 27299733 -1704923 - NTS_DM Other Other -161 79 38 1 793 876 0 0 0 chrUextra 27299733 27299829 -1704827 - NTS_DM Other Other -107 133 38 1 793 868 9 9 36 chrUextra 27299829 27299941 -1704715 - NTS_DM Other Other -107 133 25 1 793 21 57 0 0 chrUextra 27299968 27300003 -1704653 + AT_rich Low_complexity Low_complexity 1 35 0 1 793 1350 18 0 6 chrUextra 27300003 27300168 -1704488 - NTS_DM Other Other -39 201 38 1 793 913 10 0 0 chrUextra 27300168 27300270 -1704386 - NTS_DM Other Other -107 133 32 1 793 1026 77 8 19 chrUextra 27300373 27300955 -1703701 - RSP Satellite Satellite -79 576 1 1 793 5090 29 0 0 chrUextra 27301055 27301637 -1703019 + SSU-rRNA_Dme rRNA rRNA 180 761 -1234 1 793 2663 172 9 19 chrUextra 27301737 27302313 -1702343 - SAR_DM Satellite Satellite -504 968 399 1 793 5323 5 0 0 chrUextra 27302419 27303001 -1701655 - DM1731_I LTR Copia -3279 697 116 1 793 1200 22 0 0 chrUextra 27303312 27303447 -1701209 - 5S_DM RNA RNA 0 135 1 1 793 1333 24 0 6 chrUextra 27303791 27303956 -1700700 + NTS_DM Other Other 38 201 -39 1 793 936 9 0 27 chrUextra 27304008 27304120 -1700536 + NTS_DM Other Other 25 133 -107 1 793 1558 15 20 20 chrUextra 27304120 27304323 -1700333 + NTS_DM Other Other 38 240 0 1 793 341 26 0 0 chrUextra 27304326 27304365 -1700291 + NTS_DM Other Other 5 43 -197 1 793 3035 32 0 16 chrUextra 27304467 27305047 -1699609 + Copia_I LTR Copia 2239 2652 -1941 1 793 1709 92 11 46 chrUextra 27305147 27305430 -1699226 + MDG1_I LTR Gypsy 6008 6280 -316 1 793 730 85 226 73 chrUextra 27305404 27305581 -1699075 + MDG1_I LTR Gypsy 6393 6596 0 1 793 383 68 17 0 chrUextra 27305600 27305659 -1698997 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 793 359 121 52 0 chrUextra 27305671 27305729 -1698927 + MDG1_LTR LTR Gypsy 123 183 -259 1 793 915 56 0 0 chrUextra 27306283 27306409 -1698247 + (TATTG)n Simple_repeat Simple_repeat 5 130 0 1 793 2806 174 26 3 chrUextra 27306514 27307086 -1697570 + SAR_DM Satellite Satellite 295 879 -593 1 793 489 45 76 0 chrUextra 27307027 27307093 -1697563 - ARS406_DM Unknown Unknown -164 189 119 1 793 5321 3 0 0 chrUextra 27307193 27307775 -1696881 + FW_DM LINE Jockey 3141 3722 -970 1 793 5401 0 2 2 chrUextra 27307875 27308457 -1696199 + SSU-rRNA_Dme rRNA rRNA 1413 1994 -1 1 793 2460 113 14 29 chrUextra 27308557 27309139 -1695517 + DMSAT6 Satellite Satellite 1 572 -85 1 793 4526 11 0 69 chrUextra 27309239 27309821 -1694835 - DM176_I LTR Gypsy -5412 1008 467 1 793 2499 184 12 8 chrUextra 27309921 27310503 -1694153 - SAR_DM Satellite Satellite -823 583 1 1 793 479 198 0 10 chrUextra 27310603 27310700 -1693956 - HETRP_DM Satellite Satellite -248 1624 1529 1 793 751 203 6 19 chrUextra 27310855 27311011 -1693645 - HETRP_DM Satellite Satellite -190 1682 1529 1 793 2624 177 24 24 chrUextra 27311287 27311867 -1692789 - SAR_DM Satellite Satellite -369 1103 524 1 793 5319 2 5 2 chrUextra 27311967 27312549 -1692107 - LSU-rRNA_Dme rRNA rRNA -150 3750 3167 1 793 4797 0 36 17 chrUextra 27312649 27313231 -1691425 + ROO_I LTR Pao 428 1020 -7236 1 793 5150 0 0 0 chrUextra 27313357 27313913 -1690743 - TIRANT_I LTR Gypsy 0 7692 7137 1 793 485 210 423 18 chrUextra 27314013 27314362 -1690294 + MAX_I LTR Pao 676 1164 -6750 1 793 920 89 211 18 chrUextra 27314362 27314580 -1690076 + MAX_I LTR Pao 938 1197 -6717 1 793 3821 106 126 5 chrUextra 27314696 27315277 -1689379 - Gypsy12_I LTR Gypsy -2813 2733 2083 1 793 372 197 0 0 chrUextra 27315586 27315662 -1688994 + BS LINE Jockey 2027 2102 -3024 1 793 308 200 97 65 chrUextra 27315787 27315942 -1688714 + BS LINE Jockey 2015 2174 -2952 1 793 252 188 0 0 chrUextra 27316059 27316123 -1688533 + (AATAG)n Simple_repeat Simple_repeat 5 68 0 1 793 3383 0 0 0 chrUextra 27316123 27316484 -1688172 - BEL_LTR LTR Pao 0 361 1 1 793 1455 0 0 0 chrUextra 27316484 27316641 -1688015 - BEL_I LTR Pao 0 5404 5248 1 793 2523 181 8 21 chrUextra 27316743 27318004 -1686652 - DMSAT6 Satellite Satellite -250 1244 1 1 793 5249 0 0 2 chrUextra 27318105 27318687 -1685969 + ROO_I LTR Pao 3120 3700 -4556 1 793 335 0 0 162 chrUextra 27319189 27319368 -1685288 + (CATAG)n Simple_repeat Simple_repeat 1 150 0 1 793 1328 14 0 14 chrUextra 27319473 27319756 -1684900 + (GAGAA)n Simple_repeat Simple_repeat 1 279 0 1 793 1041 94 0 0 chrUextra 27319760 27320048 -1684608 + (ACATG)n Simple_repeat Simple_repeat 1 288 0 1 793 1233 73 0 0 chrUextra 27320211 27320376 -1684280 + (TCCTG)n Simple_repeat Simple_repeat 4 168 0 1 793 5276 0 2 0 chrUextra 27320833 27321415 -1683241 - LSU-rRNA_Dme rRNA rRNA -3095 805 223 1 793 2550 91 16 17 chrUextra 27321515 27322097 -1682559 + DMSAT6 Satellite Satellite 1 581 -82 1 793 2846 172 17 7 chrUextra 27322198 27322777 -1681879 + SAR_DM Satellite Satellite 301 885 -587 1 793 2711 183 11 12 chrUextra 27322880 27323451 -1681205 + SAR_DM Satellite Satellite 507 1076 -396 1 793 5303 0 5 2 chrUextra 27323561 27324142 -1680514 + SSU-rRNA_Dme rRNA rRNA 616 1198 -797 1 793 32 0 0 0 chrUextra 27324304 27324336 -1680320 + AT_rich Low_complexity Low_complexity 1 32 0 1 793 3288 6 0 0 chrUextra 27324468 27324823 -1679833 + SSU-rRNA_Dme rRNA rRNA 1 355 -1640 1 793 2356 121 7 36 chrUextra 27324943 27325504 -1679152 - DMSAT6 Satellite Satellite -3 545 1 1 793 5431 2 0 0 chrUextra 27325604 27326185 -1678471 + LSU-rRNA_Dme rRNA rRNA 2363 2943 -957 1 793 2659 183 7 19 chrUextra 27326285 27326864 -1677792 + SAR_DM Satellite Satellite 540 1111 -361 1 793 3034 154 11 9 chrUextra 27326966 27327535 -1677121 - SAR_DM Satellite Satellite -534 938 369 1 793 1661 0 20 15 chrUextra 27327647 27327850 -1676806 + NTS_DM Other Other 37 240 0 1 793 1657 0 0 0 chrUextra 27327850 27328034 -1676622 + NTS_DM Other Other 1 184 -56 1 793 2436 100 13 25 chrUextra 27329690 27330246 -1674410 + DMSAT6 Satellite Satellite 1 548 -65 1 793 3710 43 20 14 chrUextra 27330371 27330863 -1673793 - BATUMI_I LTR Pao -1042 6921 6427 1 793 486 45 0 0 chrUextra 27330886 27330952 -1673704 + BATUMI_I LTR Pao 7303 7368 -595 1 793 1041 94 0 0 chrUextra 27331407 27331633 -1673023 + (ACATG)n Simple_repeat Simple_repeat 1 226 0 1 793 2109 121 12 39 chrUextra 27331745 27332314 -1672342 - DMSAT6 Satellite Satellite -1 553 1 1 793 5327 2 0 0 chrUextra 27332414 27332995 -1671661 + DOC LINE Jockey 2420 3000 -1725 1 793 5146 3 0 3 chrUextra 27333095 27333676 -1670980 - ROO_I LTR Pao -6089 2167 1589 1 793 1855 0 0 5 chrUextra 27333776 27333977 -1670679 + SSU-rRNA_Dme rRNA rRNA 1796 1995 0 1 793 21 89 0 0 chrUextra 27333996 27334052 -1670604 + AT_rich Low_complexity Low_complexity 1 56 0 1 793 4192 65 43 19 chrUextra 27334457 27335038 -1669618 + R1_DM LINE R1 196 790 -4566 1 793 1400 181 10 5 chrUextra 27335143 27335719 -1668937 + SAR_DM Satellite Satellite 1 578 -558 1 793 2413 191 66 7 chrUextra 27335825 27336400 -1668256 - SAR_DM Satellite Satellite -479 993 385 1 793 2338 181 72 14 chrUextra 27336508 27337075 -1667581 + TAHRE LINE telomeric 7309 7908 -2555 1 793 2697 151 17 25 chrUextra 27337205 27338442 -1666214 - DMSAT6 Satellite Satellite 0 1226 1 1 793 2873 166 10 10 chrUextra 27338545 27339124 -1665532 - SAR_DM Satellite Satellite -514 958 380 1 793 225 0 0 0 chrUextra 27339224 27339248 -1665408 - NTS_DM Other Other -216 24 1 1 793 1908 13 17 17 chrUextra 27339248 27339488 -1665168 - NTS_DM Other Other 0 240 1 1 793 1883 21 17 13 chrUextra 27339488 27339727 -1664929 - NTS_DM Other Other 0 240 1 1 793 540 13 39 39 chrUextra 27339727 27339805 -1664851 - NTS_DM Other Other 0 240 163 1 793 3341 10 1 8 chrUextra 27339906 27340486 -1664170 + HETRP_DM Satellite Satellite 1 575 -1284 1 793 5281 0 0 2 chrUextra 27340586 27341167 -1663489 - R1_DM LINE R1 -2152 3204 2625 1 793 5253 2 0 2 chrUextra 27341948 27342515 -1662141 - LSU-rRNA_Dme rRNA rRNA -695 3205 2640 1 793 1812 281 24 2 chrUextra 27342632 27343178 -1661478 - ROVER-I_DM LTR Gypsy -5084 1500 943 1 793 5212 3 2 3 chrUextra 27343310 27343891 -1660765 + R1_DM LINE R1 3585 4164 -1192 1 793 2925 157 14 10 chrUextra 27343991 27344571 -1660085 - SAR_DM Satellite Satellite -539 933 352 1 793 202 265 0 0 chrUextra 27344705 27344754 -1659902 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 793 2764 173 10 16 chrUextra 27345353 27345933 -1658723 + SAR_DM Satellite Satellite 430 1006 -466 1 793 21 95 0 0 chrUextra 27346236 27346299 -1658357 + AT_rich Low_complexity Low_complexity 1 63 0 1 793 2411 0 0 82 chrUextra 27346311 27346615 -1658041 + LSU-rRNA_Dme rRNA rRNA 1 279 -3621 1 793 2514 120 11 21 chrUextra 27347396 27347968 -1656688 + DMSAT6 Satellite Satellite 1 565 -74 1 793 2859 164 10 12 chrUextra 27348077 27348656 -1656000 + SAR_DM Satellite Satellite 381 958 -514 1 793 5326 3 0 2 chrUextra 27348758 27349339 -1655317 - LSU-rRNA_Dme rRNA rRNA -1430 2470 1891 1 793 2583 92 17 28 chrUextra 27349440 27350020 -1654636 - DMSAT6 Satellite Satellite -75 574 1 1 793 990 117 7 0 chrUextra 27350120 27350274 -1654382 + HETA LINE telomeric 3033 3187 -2894 1 793 1094 156 62 53 chrUextra 27350396 27350701 -1653955 + TART LINE telomeric 9364 9659 -4818 1 793 3851 18 0 0 chrUextra 27350801 27351252 -1653404 - TART LINE telomeric -5571 8906 8456 1 793 725 87 38 30 chrUextra 27351250 27351381 -1653275 - TART LINE telomeric -3809 10668 10537 1 793 4532 12 0 0 chrUextra 27351514 27352021 -1652635 - DM176_LTR LTR Gypsy 0 507 1 1 793 376 0 0 0 chrUextra 27352021 27352061 -1652595 - DM176_I LTR Gypsy 0 6420 6381 1 793 241 0 0 0 chrUextra 27352161 27352187 -1652469 - NTS_DM Other Other -214 26 1 1 793 1828 21 17 21 chrUextra 27352187 27352428 -1652228 - NTS_DM Other Other 0 240 1 1 793 1880 17 17 17 chrUextra 27352428 27352668 -1651988 - NTS_DM Other Other 0 240 1 1 793 486 14 55 41 chrUextra 27352668 27352741 -1651915 - NTS_DM Other Other 0 240 167 1 793 5273 5 2 2 chrUextra 27352841 27353421 -1651235 + LSU-rRNA_Dme rRNA rRNA 739 1318 -2582 1 793 5419 2 2 0 chrUextra 27353521 27354101 -1650555 - LSU-rRNA_Dme rRNA rRNA -13 3887 3307 1 793 5317 3 2 2 chrUextra 27354201 27354781 -1649875 + SSU-rRNA_Dme rRNA rRNA 690 1269 -726 1 793 4757 0 0 0 chrUextra 27354881 27355405 -1649251 + DOC LINE Jockey 4202 4725 0 1 793 485 0 0 0 chrUextra 27355408 27355461 -1649195 - CIRCE LINE Composite -4896 1460 1408 1 793 2672 73 14 45 chrUextra 27356241 27356799 -1647857 - DMSAT6 Satellite Satellite -99 540 1 1 793 4145 108 3 5 chrUextra 27356922 27357501 -1647155 + Gypsy12_I LTR Gypsy 2194 2771 -2775 1 793 5309 7 0 0 chrUextra 27357603 27358181 -1646475 + FW_DM LINE Jockey 3816 4393 -299 1 793 5179 3 0 2 chrUextra 27358281 27358861 -1645795 + ROO_I LTR Pao 3131 3709 -4547 1 793 2596 168 58 14 chrUextra 27358968 27359541 -1645115 + SAR_DM Satellite Satellite 326 923 -549 1 793 1358 6 0 24 chrUextra 27359689 27359855 -1644801 - NTS_DM Other Other -78 162 1 1 793 1972 4 17 13 chrUextra 27359855 27360094 -1644562 - NTS_DM Other Other 0 240 1 1 793 920 0 31 24 chrUextra 27360094 27360221 -1644435 - NTS_DM Other Other 0 240 113 1 793 4997 5 12 3 chrUextra 27360321 27360901 -1643755 - TAHRE LINE telomeric -2409 8054 7470 1 793 5365 5 0 0 chrUextra 27361681 27362261 -1642395 + R1_DM LINE R1 4185 4764 -592 1 793 2656 87 14 24 chrUextra 27362366 27362941 -1641715 + DMSAT6 Satellite Satellite 1 568 -119 1 793 2504 4 0 0 chrUextra 27363353 27363621 -1641035 - ROO_LTR LTR Pao 0 428 161 1 793 5293 12 0 0 chrUextra 27363721 27364301 -1640355 - LSU-rRNA_Dme rRNA rRNA -922 2978 2399 1 793 4507 8 3 79 chrUextra 27364401 27364981 -1639675 - LSU-rRNA_Dme rRNA rRNA -1987 1913 1378 1 793 2560 92 7 43 chrUextra 27365081 27365660 -1638996 + DMSAT6 Satellite Satellite 1 557 -74 1 793 1216 44 0 0 chrUextra 27365777 27365936 -1638720 - G2_DM LINE Jockey -10 3092 2934 1 793 3084 71 32 0 chrUextra 27365932 27366341 -1638315 + G2_DM LINE Jockey 2527 2948 -154 1 793 1461 23 0 0 chrUextra 27366654 27366831 -1637825 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 793 1296 51 0 0 chrUextra 27366835 27367012 -1637644 + (CACAT)n Simple_repeat Simple_repeat 3 179 0 1 793 5205 2 2 7 chrUextra 27367121 27367701 -1636955 - LSU-rRNA_Dme rRNA rRNA -2284 1616 1040 1 793 1620 0 0 0 chrUextra 27368142 27368381 -1636275 + (TTCTC)n Simple_repeat Simple_repeat 1 239 0 1 793 2706 177 12 7 chrUextra 27368481 27369060 -1635596 - SAR_DM Satellite Satellite -667 805 224 1 793 757 0 11 0 chrUextra 27369161 27369250 -1635406 + R2_DM LINE R2 3516 3605 -2 1 793 485 36 0 0 chrUextra 27369246 27369301 -1635355 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 793 3982 5 7 0 chrUextra 27369301 27369741 -1634915 + R1_DM LINE R1 1 443 -4913 1 793 1599 6 0 0 chrUextra 27370527 27370707 -1633949 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 793 2826 3 0 3 chrUextra 27371201 27371512 -1633144 + STALKER4_LTR LTR Gypsy 93 402 0 1 793 1620 0 0 0 chrUextra 27371536 27371780 -1632876 + (CACAA)n Simple_repeat Simple_repeat 1 244 0 1 793 2514 96 2 78 chrUextra 27371886 27372441 -1632215 - DMSAT6 Satellite Satellite -59 512 1 1 793 5337 5 0 0 chrUextra 27372561 27373141 -1631515 - R1_DM LINE R1 -2864 2492 1913 1 793 4920 33 2 2 chrUextra 27373921 27374501 -1630155 + R1_DM LINE R1 2478 3057 -2299 1 793 4687 30 14 3 chrUextra 27374601 27375180 -1629476 + DM176_I LTR Gypsy 1418 2002 -4418 1 793 1296 20 0 0 chrUextra 27375281 27375431 -1629225 - NTS_DM Other Other -90 150 1 1 793 1850 17 17 21 chrUextra 27375431 27375672 -1628984 - NTS_DM Other Other 0 240 1 1 793 1383 16 21 21 chrUextra 27375672 27375861 -1628795 - NTS_DM Other Other 0 240 52 1 793 2596 112 12 7 chrUextra 27375961 27376540 -1628116 + DMSAT6 Satellite Satellite 1 582 -59 1 793 1239 6 0 48 chrUextra 27377028 27377217 -1627439 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 793 4404 71 12 7 chrUextra 27377998 27378577 -1626079 + R1_DM LINE R1 1409 1990 -3366 1 793 4622 16 128 2 chrUextra 27380035 27380614 -1624042 + DOC2_DM LINE Jockey 3318 3969 -824 1 793 5393 2 0 0 chrUextra 27380714 27381293 -1623363 - LSU-rRNA_Dme rRNA rRNA -728 3172 2594 1 793 2757 173 13 12 chrUextra 27382072 27383330 -1621326 - DMSAT6 Satellite Satellite -118 1259 1 1 793 2610 100 14 30 chrUextra 27383430 27384007 -1620649 + DMSAT6 Satellite Satellite 1 567 -29 1 793 21 95 0 0 chrUextra 27384342 27384405 -1620251 + AT_rich Low_complexity Low_complexity 1 63 0 1 793 2077 4 0 92 chrUextra 27384417 27384688 -1619968 + LSU-rRNA_Dme rRNA rRNA 1 246 -3654 1 793 886 280 40 40 chrUextra 27384804 27385355 -1619301 + DM412 LTR Gypsy 3043 3593 -3304 1 793 5004 30 2 2 chrUextra 27385467 27386046 -1618610 + R1_DM LINE R1 4699 5277 -79 1 793 2736 174 9 14 chrUextra 27386146 27386724 -1617932 + SAR_DM Satellite Satellite 284 858 -614 1 793 2832 165 13 7 chrUextra 27386825 27387382 -1617274 - SAR_DM Satellite Satellite -587 885 326 1 793 3212 0 2 63 chrUextra 27387504 27387899 -1616757 - LSU-rRNA_Dme rRNA rRNA -3529 371 1 1 793 21 95 0 0 chrUextra 27387911 27387974 -1616682 + AT_rich Low_complexity Low_complexity 1 63 0 1 793 3358 30 2 5 chrUextra 27388183 27388583 -1616073 + BATUMI_I LTR Pao 7565 7963 0 1 793 1182 53 17 23 chrUextra 27388583 27388762 -1615894 + BATUMI_LTR LTR Pao 35 178 -94 1 793 2965 161 11 9 chrUextra 27388862 27389432 -1615224 + SAR_DM Satellite Satellite 333 903 -569 1 793 2845 165 21 10 chrUextra 27389544 27390119 -1614537 + SAR_DM Satellite Satellite 369 949 -523 1 793 2776 84 11 16 chrUextra 27390220 27390787 -1613869 - DMSAT6 Satellite Satellite -102 563 1 1 793 5207 12 7 0 chrUextra 27390899 27391478 -1613178 + DM1731_I LTR Copia 904 1486 -2490 1 793 666 12 0 47 chrUextra 27391578 27391663 -1612993 - NTS_DM Other Other -135 105 25 1 793 1350 18 0 6 chrUextra 27391715 27391880 -1612776 - NTS_DM Other Other -39 201 38 1 793 936 9 0 27 chrUextra 27391880 27391992 -1612664 - NTS_DM Other Other -107 133 25 1 793 22 56 0 0 chrUextra 27392018 27392054 -1612602 + AT_rich Low_complexity Low_complexity 1 36 0 1 793 278 176 0 19 chrUextra 27392067 27392119 -1612537 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 793 4626 9 3 7 chrUextra 27392258 27392836 -1611820 + Stalker2_I LTR Gypsy 861 1436 -5966 1 793 2586 180 19 9 chrUextra 27392943 27393509 -1611147 - SAR_DM Satellite Satellite -683 789 218 1 99 2486 86 7 66 chrUextra 27393615 27394194 -1610462 - DMSAT6 Satellite Satellite -109 544 1 1 794 1716 23 14 22 chrUextra 27394294 27394517 -1610139 - NTS_DM Other Other -19 221 1 1 794 1558 15 20 20 chrUextra 27394517 27394720 -1609936 - NTS_DM Other Other 0 240 38 1 794 1951 8 17 17 chrUextra 27395008 27395248 -1609408 + NTS_DM Other Other 1 240 0 1 794 1976 0 17 17 chrUextra 27395248 27395488 -1609168 + NTS_DM Other Other 1 240 0 1 794 603 0 0 0 chrUextra 27395488 27395552 -1609104 + NTS_DM Other Other 1 64 -176 1 794 4840 12 0 5 chrUextra 27395652 27396231 -1608425 - TABOR_I LTR Gypsy -283 6053 5478 1 794 527 0 0 0 chrUextra 27396331 27396388 -1608268 - NTS_DM Other Other -146 94 38 1 794 936 9 0 27 chrUextra 27396388 27396500 -1608156 - NTS_DM Other Other -107 133 25 1 794 1350 18 0 6 chrUextra 27396552 27396717 -1607939 - NTS_DM Other Other -39 201 38 1 794 936 9 0 27 chrUextra 27396717 27396829 -1607827 - NTS_DM Other Other -107 133 25 1 794 198 0 0 0 chrUextra 27396852 27396874 -1607782 + (T)n Simple_repeat Simple_repeat 1 22 0 1 794 267 56 0 0 chrUextra 27396874 27396910 -1607746 - G6_DM LINE Jockey 0 2042 2007 1 794 380 132 66 0 chrUextra 27397689 27397795 -1606861 + GA-rich Low_complexity Low_complexity 5 117 0 1 794 270 0 129 0 chrUextra 27397792 27397862 -1606794 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 1 794 523 0 136 0 chrUextra 27397862 27398009 -1606647 + (GA)n Simple_repeat Simple_repeat 2 168 0 1 794 1720 179 15 7 chrUextra 27398368 27398947 -1605709 + SAR_DM Satellite Satellite 1 583 -645 1 794 2450 91 25 30 chrUextra 27399047 27399613 -1605043 - DMSAT6 Satellite Satellite -112 563 1 1 794 2977 168 9 7 chrUextra 27399726 27400303 -1604353 + SAR_DM Satellite Satellite 346 923 -549 1 794 5100 3 0 3 chrUextra 27400406 27400978 -1603678 - NOMAD_I LTR Gypsy -330 6242 5673 1 794 5084 24 3 0 chrUextra 27401081 27401659 -1602997 + Gypsy6_I LTR Gypsy 3638 4217 -2795 1 794 990 0 0 0 chrUextra 27402227 27402337 -1602319 + (TTCTC)n Simple_repeat Simple_repeat 4 113 0 1 794 4742 25 9 10 chrUextra 27402437 27403015 -1601641 + ROO_I LTR Pao 3468 4044 -4212 1 794 5204 0 0 2 chrUextra 27403115 27403689 -1600967 + ROO_I LTR Pao 3202 3774 -4482 1 794 5363 2 2 0 chrUextra 27403793 27404371 -1600285 + SSU-rRNA_Dme rRNA rRNA 1323 1901 -94 1 794 32 0 0 0 chrUextra 27404778 27404810 -1599846 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 999 0 0 0 chrUextra 27404942 27405049 -1599607 + SSU-rRNA_Dme rRNA rRNA 1 107 -1888 1 794 2579 105 25 9 chrUextra 27405169 27405727 -1598929 + DMSAT6 Satellite Satellite 1 566 0 1 794 5240 3 3 3 chrUextra 27405827 27406405 -1598251 + LSU-rRNA_Dme rRNA rRNA 1076 1653 -2247 1 794 23 50 0 48 chrUextra 27406889 27406952 -1597704 + AT_rich Low_complexity Low_complexity 1 60 0 1 794 389 43 0 0 chrUextra 27407036 27407083 -1597573 + Baggins1 LINE LOA 5036 5082 -371 1 794 4474 4 3 81 chrUextra 27407183 27407761 -1596895 + LSU-rRNA_Dme rRNA rRNA 1537 2069 -1831 1 794 361 164 0 0 chrUextra 27407861 27407922 -1596734 - SAR_DM Satellite Satellite -804 668 608 1 794 2231 166 7 9 chrUextra 27407935 27408362 -1596294 - SAR_DM Satellite Satellite -439 1033 608 1 794 459 125 0 0 chrUextra 27408375 27408439 -1596217 - SAR_DM Satellite Satellite -439 1033 970 1 794 2336 42 0 2 chrUextra 27408539 27409117 -1595539 + PROTOP DNA P 520 1167 -3313 1 794 2259 188 82 26 chrUextra 27409222 27409795 -1594861 - TAHRE LINE telomeric -688 9775 9171 1 794 5089 4 2 0 chrUextra 27410599 27411151 -1593505 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2080 1 794 882 0 0 0 chrUextra 27411731 27411829 -1592827 + (TCTTG)n Simple_repeat Simple_repeat 5 102 0 1 794 3695 21 104 0 chrUextra 27412607 27413185 -1591471 - R1_DM LINE R1 -39 5317 4680 1 794 1578 44 0 0 chrUextra 27413289 27413839 -1590817 + (AATAG)n Simple_repeat Simple_repeat 1 550 0 1 794 5382 2 0 0 chrUextra 27413963 27414541 -1590115 + LSU-rRNA_Dme rRNA rRNA 2709 3286 -614 1 794 2824 176 11 9 chrUextra 27414641 27415215 -1589441 - SAR_DM Satellite Satellite -651 821 247 1 794 4823 12 0 5 chrUextra 27415319 27415897 -1588759 - MAX_I LTR Pao -6917 997 423 1 794 2877 171 16 5 chrUextra 27415997 27416573 -1588083 + SAR_DM Satellite Satellite 337 918 -554 1 794 2223 69 7 0 chrUextra 27416675 27416964 -1587692 - R1_DM LINE R1 -5065 291 1 1 794 1015 26 0 0 chrUextra 27416997 27417111 -1587545 - R1_DM LINE R1 0 5356 5243 1 794 1308 0 0 0 chrUextra 27417108 27417253 -1587403 - R1_DM LINE R1 -290 5066 4922 1 794 34 24 0 0 chrUextra 27417851 27417892 -1586764 + AT_rich Low_complexity Low_complexity 1 41 0 1 794 2505 96 30 19 chrUextra 27418709 27419285 -1585371 - DMSAT6 Satellite Satellite -102 581 1 1 794 4875 0 0 43 chrUextra 27419389 27419965 -1584691 - LSU-rRNA_Dme rRNA rRNA -3293 607 57 1 794 5363 0 3 0 chrUextra 27420065 27420642 -1584014 + SSU-rRNA_Dme rRNA rRNA 1392 1970 -25 1 794 2920 168 9 9 chrUextra 27420742 27421319 -1583337 + SAR_DM Satellite Satellite 452 1028 -444 1 794 2395 174 14 5 chrUextra 27421421 27421992 -1582664 - SAR_DM Satellite Satellite -593 575 1 1 794 463 35 0 50 chrUextra 27422096 27422156 -1582500 - NTS_DM Other Other -159 81 25 1 794 22 56 0 0 chrUextra 27422182 27422218 -1582438 + AT_rich Low_complexity Low_complexity 1 36 0 1 794 3594 0 0 0 chrUextra 27422290 27422673 -1581983 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 1 794 922 10 0 0 chrUextra 27422773 27422877 -1581779 - STALKER4_LTR LTR Gypsy -298 104 1 1 794 2793 177 9 11 chrUextra 27423455 27424027 -1580629 + SAR_DM Satellite Satellite 456 1026 -446 1 794 2483 106 14 14 chrUextra 27424127 27424704 -1579952 + DMSAT6 Satellite Satellite 1 577 -69 1 794 2148 117 9 51 chrUextra 27424828 27425381 -1579275 + DMSAT6 Satellite Satellite 1 529 -3 1 794 2776 173 9 5 chrUextra 27425502 27426054 -1578602 + SAR_DM Satellite Satellite 326 879 -593 1 794 4095 92 0 28 chrUextra 27426158 27426726 -1577930 + Gypsy12_I LTR Gypsy 3323 3874 -1672 1 794 3985 19 0 53 chrUextra 27426835 27427344 -1577312 - DM176_I LTR Gypsy -5486 934 453 1 794 673 25 12 0 chrUextra 27427332 27427412 -1577244 - DM176_I LTR Gypsy -6271 149 69 1 794 202 265 0 0 chrUextra 27427547 27427596 -1577060 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 794 1746 164 49 5 chrUextra 27428189 27428766 -1575890 + SAR_DM Satellite Satellite 1 602 -677 1 794 2640 182 7 11 chrUextra 27428888 27429443 -1575213 - SAR_DM Satellite Satellite -396 1076 524 1 794 2596 95 26 16 chrUextra 27429544 27430113 -1574543 + DMSAT6 Satellite Satellite 1 574 -119 1 794 5286 7 0 0 chrUextra 27430220 27430797 -1573859 - DOC LINE Jockey -1005 3720 3144 1 794 2477 190 17 23 chrUextra 27430898 27431474 -1573182 - SAR_DM Satellite Satellite -371 1101 529 1 794 1595 35 0 5 chrUextra 27431574 27431774 -1572882 + G6_DM LINE Jockey 1844 2042 0 1 794 1413 58 0 0 chrUextra 27431789 27431963 -1572693 + DM1731_LTR LTR Copia 163 336 0 1 794 1695 5 5 0 chrUextra 27431963 27432151 -1572505 + DM1731_I LTR Copia 1 189 -3787 1 794 2791 152 19 9 chrUextra 27432971 27433501 -1571155 - SAR_DM Satellite Satellite -569 903 369 1 794 4938 40 0 0 chrUextra 27433605 27434182 -1570474 - R1_DM LINE R1 -3489 1867 1291 1 794 1158 121 0 0 chrUextra 27434284 27434508 -1570148 + (TA)n Simple_repeat Simple_repeat 1 224 0 1 794 3007 9 8 8 chrUextra 27434508 27434859 -1569797 + DM297_LTR LTR Gypsy 2 352 -62 1 794 5092 0 2 2 chrUextra 27434959 27435536 -1569120 - R1_DM LINE R1 -4149 1207 631 1 794 958 169 0 69 chrUextra 27435638 27435842 -1568814 - TART LINE telomeric -5633 8844 8655 1 794 1216 190 37 48 chrUextra 27435842 27436210 -1568446 - TAHRE LINE telomeric -3220 7243 6944 1 794 2769 171 45 7 chrUextra 27436313 27436890 -1567766 - SAR_DM Satellite Satellite -611 861 263 1 794 5252 3 2 3 chrUextra 27436990 27437567 -1567089 - LSU-rRNA_Dme rRNA rRNA -2282 1618 1043 1 794 5384 0 0 2 chrUextra 27439021 27439598 -1565058 - LSU-rRNA_Dme rRNA rRNA -477 3423 2848 1 794 296 184 77 26 chrUextra 27439698 27439776 -1564880 + CT-rich Low_complexity Low_complexity 1 82 0 1 794 4392 72 5 3 chrUextra 27440374 27440948 -1563708 - R1_DM LINE R1 -4749 607 33 1 794 23 0 0 0 chrUextra 27441121 27441144 -1563512 + AT_rich Low_complexity Low_complexity 1 23 0 1 794 1512 18 0 0 chrUextra 27441726 27441895 -1562761 - LSU-rRNA_Dme rRNA rRNA -1092 2808 2640 1 794 3659 17 0 0 chrUextra 27441893 27442302 -1562354 - R1_DM LINE R1 0 5356 4948 1 794 28 48 0 0 chrUextra 27443416 27443458 -1561198 + AT_rich Low_complexity Low_complexity 1 42 0 1 794 5190 16 0 0 chrUextra 27443755 27444330 -1560326 - LSU-rRNA_Dme rRNA rRNA -1537 2363 1789 1 794 267 239 0 0 chrUextra 27444430 27444518 -1560138 + (TTTG)n Simple_repeat Simple_repeat 1 88 0 1 794 4517 4 0 0 chrUextra 27444518 27445006 -1559650 - DMRT1B LINE R1 -14 5169 4682 1 794 936 0 0 0 chrUextra 27445106 27445210 -1559446 + (TTGTG)n Simple_repeat Simple_repeat 2 105 0 1 794 3667 2 0 2 chrUextra 27445234 27445637 -1559019 - STALKER4_LTR LTR Gypsy 0 402 1 1 794 407 0 0 0 chrUextra 27445637 27445682 -1558974 - STALKER4_I LTR Gypsy 0 6530 6486 1 794 2308 13 16 7 chrUextra 27445782 27446087 -1558569 + STALKER4_I LTR Gypsy 6223 6530 0 1 794 688 48 0 0 chrUextra 27446087 27446170 -1558486 + STALKER4_LTR LTR Gypsy 1 83 -319 1 794 1702 16 0 0 chrUextra 27446165 27446358 -1558298 - STALKER4_I LTR Gypsy -1740 4790 4598 1 794 202 265 0 0 chrUextra 27446469 27446518 -1558138 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 794 1521 33 0 2 chrUextra 27447134 27447710 -1556946 + (CTATT)n Simple_repeat Simple_repeat 1 575 0 1 794 299 132 19 0 chrUextra 27447810 27447863 -1556793 - ARS406_DM Unknown Unknown -299 54 1 1 794 2796 173 9 5 chrUextra 27447823 27448386 -1556270 + SAR_DM Satellite Satellite 246 810 -662 1 794 574 0 0 0 chrUextra 27448486 27448553 -1556103 + R2_DM LINE R2 3541 3607 0 1 794 4599 4 0 4 chrUextra 27448556 27449062 -1555594 + LSU-rRNA_Dme rRNA rRNA 2578 3081 -819 1 794 4828 14 9 0 chrUextra 27449162 27449738 -1554918 + STALKER4_I LTR Gypsy 1138 1718 -4812 1 794 2725 183 7 5 chrUextra 27449838 27450414 -1554242 - SAR_DM Satellite Satellite -676 796 220 1 794 2880 170 9 7 chrUextra 27450515 27451089 -1553567 + SAR_DM Satellite Satellite 278 852 -620 1 794 2602 96 9 23 chrUextra 27451210 27451766 -1552890 - DMSAT6 Satellite Satellite -7 547 1 1 794 423 129 23 46 chrUextra 27452544 27452674 -1551982 + CT-rich Low_complexity Low_complexity 4 130 0 1 794 882 90 11 43 chrUextra 27452674 27452860 -1551796 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 794 268 132 0 50 chrUextra 27452860 27452892 -1551764 + polypyrimidine Low_complexity Low_complexity 48 77 0 1 794 860 117 0 12 chrUextra 27452892 27453065 -1551591 + (CATCT)n Simple_repeat Simple_repeat 3 173 0 1 794 268 132 0 50 chrUextra 27453065 27453112 -1551544 + polypyrimidine Low_complexity Low_complexity 2 47 0 1 794 5230 2 0 3 chrUextra 27453221 27453791 -1550865 - R1_DM LINE R1 0 5356 4789 1 794 2539 96 11 21 chrUextra 27453894 27454470 -1550186 - DMSAT6 Satellite Satellite -86 570 1 1 794 261 0 0 0 chrUextra 27455246 27455275 -1549381 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 1 794 2517 95 3 40 chrUextra 27456600 27457174 -1547482 - DMSAT6 Satellite Satellite -149 552 1 1 794 1989 0 0 0 chrUextra 27457274 27457486 -1547170 - TABOR_LTR LTR Gypsy -294 212 1 1 794 2152 104 0 6 chrUextra 27457484 27457850 -1546806 - TABOR_I LTR Gypsy 0 6336 5973 1 794 2681 182 11 7 chrUextra 27457952 27458526 -1546130 - SAR_DM Satellite Satellite -641 831 256 1 794 3668 58 32 18 chrUextra 27458626 27459119 -1545537 - R1_DM LINE R1 -4589 767 268 1 794 672 71 0 0 chrUextra 27459118 27459202 -1545454 - R1_DM LINE R1 -1442 3914 3831 1 794 2543 175 23 13 chrUextra 27459302 27459859 -1544797 + SAR_DM Satellite Satellite 514 1076 -396 1 794 504 174 87 0 chrUextra 27460001 27460116 -1544540 - NTS_DM Other Other -112 128 4 1 794 1358 6 0 24 chrUextra 27460226 27460392 -1544264 - NTS_DM Other Other -78 162 1 1 794 1209 6 25 19 chrUextra 27460392 27460554 -1544102 - NTS_DM Other Other 0 240 78 1 794 2764 179 12 5 chrUextra 27460655 27461229 -1543427 - SAR_DM Satellite Satellite -645 827 250 1 794 1249 293 177 14 chrUextra 27461337 27461896 -1542760 - FROGGER_I LTR Copia -793 1284 635 1 794 2509 89 17 19 chrUextra 27462004 27462579 -1542077 + DMSAT6 Satellite Satellite 1 573 -74 1 794 2752 169 12 14 chrUextra 27462679 27463254 -1541402 + SAR_DM Satellite Satellite 378 951 -521 1 794 2659 85 31 16 chrUextra 27463354 27463929 -1540727 - DMSAT6 Satellite Satellite -67 584 1 1 794 526 32 0 0 chrUextra 27464029 27464092 -1540564 - R1_DM LINE R1 -5293 63 1 1 794 4148 25 4 0 chrUextra 27464125 27464604 -1540052 - R1_DM LINE R1 0 5356 4876 1 794 2691 78 19 11 chrUextra 27464704 27465279 -1539377 + DMSAT6 Satellite Satellite 1 580 -74 1 794 32 0 0 0 chrUextra 27466142 27466174 -1538482 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 2922 3 0 6 chrUextra 27466306 27466629 -1538027 + SSU-rRNA_Dme rRNA rRNA 1 321 -1674 1 794 322 235 99 0 chrUextra 27466788 27466950 -1537706 + (TCTTG)n Simple_repeat Simple_repeat 3 180 0 1 794 364 217 106 0 chrUextra 27466957 27467158 -1537498 + (TCTTG)n Simple_repeat Simple_repeat 1 222 0 1 794 279 219 92 18 chrUextra 27467056 27467219 -1537437 + (TTCTG)n Simple_repeat Simple_repeat 5 179 0 1 794 5275 3 0 0 chrUextra 27467405 27467979 -1536677 - DOC2_DM LINE Jockey -282 4511 3938 1 794 5287 2 0 0 chrUextra 27468079 27468654 -1536002 - R1_DM LINE R1 -3455 1901 1327 1 794 2624 105 5 35 chrUextra 27468757 27469329 -1535327 - DMSAT6 Satellite Satellite -3 555 1 1 794 5071 5 2 7 chrUextra 27469429 27470004 -1534652 + R1_DM LINE R1 3635 4206 -1150 1 794 313 147 0 21 chrUextra 27470104 27470175 -1534481 + GA-rich Low_complexity Low_complexity 2 71 0 1 794 1071 94 0 0 chrUextra 27470175 27470355 -1534301 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 794 313 147 0 21 chrUextra 27470355 27470380 -1534276 + polypurine Low_complexity Low_complexity 72 96 0 1 794 864 61 0 0 chrUextra 27470387 27470502 -1534154 + (ATAAG)n Simple_repeat Simple_repeat 4 118 0 1 794 369 123 0 0 chrUextra 27470502 27470567 -1534089 + (ATATG)n Simple_repeat Simple_repeat 2 66 0 1 794 780 71 0 0 chrUextra 27470567 27470679 -1533977 + (ATAAG)n Simple_repeat Simple_repeat 5 116 0 1 794 1347 68 0 0 chrUextra 27470780 27471239 -1533417 + (TTGTG)n Simple_repeat Simple_repeat 1 459 0 1 794 543 180 0 0 chrUextra 27471243 27471354 -1533302 + (CAACG)n Simple_repeat Simple_repeat 2 112 0 1 794 2553 100 20 27 chrUextra 27471454 27472018 -1532638 - DMSAT6 Satellite Satellite -90 559 1 1 794 4231 71 2 24 chrUextra 27472129 27472704 -1531952 - R1_DM LINE R1 -4546 810 249 1 794 2787 177 9 7 chrUextra 27472806 27473376 -1531280 - SAR_DM Satellite Satellite -620 852 282 1 794 2613 78 36 20 chrUextra 27473493 27474053 -1530603 - DMSAT6 Satellite Satellite -3 569 1 1 794 2656 69 14 57 chrUextra 27474154 27474711 -1529945 + DMSAT6 Satellite Satellite 1 533 -69 1 794 3733 0 2 55 chrUextra 27475504 27475955 -1528701 - LSU-rRNA_Dme rRNA rRNA -3473 427 1 1 794 21 95 0 0 chrUextra 27475967 27476030 -1528626 + AT_rich Low_complexity Low_complexity 1 63 0 1 794 2360 111 37 12 chrUextra 27476179 27476754 -1527902 - DMSAT6 Satellite Satellite -32 589 1 1 794 879 19 0 0 chrUextra 27477529 27477634 -1527022 + (TTCTC)n Simple_repeat Simple_repeat 1 105 0 1 794 1230 62 0 0 chrUextra 27477635 27477812 -1526844 + (CATCT)n Simple_repeat Simple_repeat 3 179 0 1 794 1380 47 0 0 chrUextra 27477823 27478103 -1526553 + (CATCG)n Simple_repeat Simple_repeat 1 280 0 1 794 2572 92 28 9 chrUextra 27478878 27479448 -1525208 - DMSAT6 Satellite Satellite -13 581 1 1 794 5085 21 14 0 chrUextra 27479551 27480125 -1524531 - Copia2_I LTR Copia -1690 2472 1891 1 794 5265 7 0 0 chrUextra 27480225 27480799 -1523857 + R1_DM LINE R1 4278 4851 -505 1 794 1620 20 0 0 chrUextra 27480899 27481153 -1523503 + (GAGAA)n Simple_repeat Simple_repeat 1 254 0 1 794 2468 192 7 9 chrUextra 27481573 27482126 -1522530 + SAR_DM Satellite Satellite 525 1076 -396 1 794 1287 0 0 0 chrUextra 27482247 27482390 -1522266 + (GAGAA)n Simple_repeat Simple_repeat 4 146 0 1 794 5219 3 2 0 chrUextra 27482921 27483495 -1521161 - FW_DM LINE Jockey -987 3705 3131 1 794 5209 2 3 0 chrUextra 27483595 27484161 -1520495 - LSU-rRNA_Dme rRNA rRNA -1545 2355 1788 1 794 3816 116 7 2 chrUextra 27484269 27484840 -1519816 + S_DM DNA Tc1 916 1489 -247 1 794 266 196 0 19 chrUextra 27485687 27485739 -1518917 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 266 196 0 19 chrUextra 27485779 27485831 -1518825 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 266 196 0 19 chrUextra 27485871 27485923 -1518733 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 277 176 0 19 chrUextra 27485954 27486006 -1518650 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 22 56 0 0 chrUextra 27486019 27486055 -1518601 + AT_rich Low_complexity Low_complexity 1 36 0 1 794 913 9 0 27 chrUextra 27486081 27486191 -1518465 + NTS_DM Other Other 25 131 -109 1 794 277 176 0 19 chrUextra 27486336 27486388 -1518268 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 236 196 0 38 chrUextra 27486419 27486472 -1518184 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27486512 27486564 -1518092 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27486604 27486656 -1518000 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 1016 0 0 0 chrUextra 27486757 27486865 -1517791 - LSU-rRNA_Dme rRNA rRNA 0 3900 3793 1 794 4976 37 0 0 chrUextra 27486965 27487539 -1517117 - R1_DM LINE R1 -3342 2014 1441 1 794 1704 25 16 37 chrUextra 27487659 27487904 -1516752 - NTS_DM Other Other 0 240 1 1 794 1866 21 17 17 chrUextra 27487904 27488144 -1516512 - NTS_DM Other Other 0 240 1 1 794 458 15 58 43 chrUextra 27488144 27488213 -1516443 - NTS_DM Other Other 0 240 171 1 794 5172 3 0 0 chrUextra 27488322 27488887 -1515769 + DMRT1B LINE R1 4480 5044 -139 1 794 2474 110 18 49 chrUextra 27489006 27489561 -1515095 - DMSAT6 Satellite Satellite 0 538 1 1 794 2737 242 17 9 chrUextra 27489662 27490909 -1513747 - SAR_DM Satellite Satellite -435 1257 1 1 794 2333 184 51 23 chrUextra 27491010 27491582 -1513074 - SAR_DM Satellite Satellite -371 1101 514 1 794 32 0 0 0 chrUextra 27491981 27492013 -1512643 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 1041 0 0 0 chrUextra 27492145 27492257 -1512399 + SSU-rRNA_Dme rRNA rRNA 1 112 -1883 1 794 985 71 8 19 chrUextra 27492357 27492931 -1511725 + RSP Satellite Satellite 1 568 0 1 794 5262 0 0 2 chrUextra 27493031 27493605 -1511051 + R1_DM LINE R1 2822 3394 -1962 1 794 2152 194 73 14 chrUextra 27493708 27494277 -1510379 - TART LINE telomeric -4998 9479 8950 1 794 2676 85 13 30 chrUextra 27494383 27494940 -1509716 + DMSAT6 Satellite Satellite 1 547 -29 1 794 1448 51 23 0 chrUextra 27495450 27495627 -1509029 + PROTOP DNA P 74 254 -4226 1 794 5282 3 0 0 chrUextra 27495727 27496300 -1508356 - R1_DM LINE R1 -1642 3714 3142 1 794 1570 156 16 7 chrUextra 27496400 27496703 -1507953 - SAR_DM Satellite Satellite -671 801 496 1 794 1140 187 12 4 chrUextra 27496717 27496969 -1507687 - SAR_DM Satellite Satellite -683 789 536 1 794 5229 0 12 0 chrUextra 27497073 27497646 -1507010 - ROO_I LTR Pao -365 7891 7312 1 794 5073 0 0 2 chrUextra 27498419 27498992 -1505664 + ROO_I LTR Pao 811 1382 -6874 1 794 32 0 0 0 chrUextra 27499241 27499273 -1505383 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 28 48 0 0 chrUextra 27499602 27499644 -1505012 + AT_rich Low_complexity Low_complexity 1 42 0 1 794 823 218 4 22 chrUextra 27499770 27499815 -1504841 - SAR_DM Satellite Satellite -425 1047 822 1 794 1201 93 0 11 chrUextra 27499815 27500000 -1504656 + ARS406_DM Unknown Unknown 1 183 -170 1 794 1613 170 15 9 chrUextra 27500000 27500338 -1504318 - SAR_DM Satellite Satellite -651 821 482 1 794 4679 2 0 2 chrUextra 27500438 27500945 -1503711 + LSU-rRNA_Dme rRNA rRNA 2142 2647 -1253 1 794 612 0 0 0 chrUextra 27500944 27501011 -1503645 + R1_DM LINE R1 3472 3538 -1818 1 794 396 0 0 0 chrUextra 27501111 27501155 -1503501 + (TTCTC)n Simple_repeat Simple_repeat 2 45 0 1 794 342 0 0 0 chrUextra 27501167 27501205 -1503451 + (GAGAA)n Simple_repeat Simple_repeat 4 41 0 1 794 2685 171 14 11 chrUextra 27501784 27502356 -1502300 + SAR_DM Satellite Satellite 467 1040 -432 1 794 861 11 0 0 chrUextra 27503130 27503224 -1501432 - NTS_DM Other Other -146 94 1 1 794 1790 38 17 17 chrUextra 27503224 27503464 -1501192 - NTS_DM Other Other 0 240 1 1 794 1332 81 10 5 chrUextra 27503467 27503666 -1500990 - NTS_DM Other Other -3 237 38 1 794 268 0 0 0 chrUextra 27503666 27503703 -1500953 - NTS_DM Other Other -107 133 97 1 794 4064 51 30 12 chrUextra 27503803 27504376 -1500280 + PROTOP DNA P 219 801 -3679 1 794 2483 10 0 7 chrUextra 27504476 27504777 -1499879 + DOC LINE Jockey 4427 4725 0 1 794 2256 23 0 11 chrUextra 27504780 27505049 -1499607 + Gypsy12_LTR LTR Gypsy 1138 1403 -933 1 794 2847 168 9 11 chrUextra 27505150 27505722 -1498934 - SAR_DM Satellite Satellite -432 1040 470 1 794 1803 170 4 7 chrUextra 27505834 27506395 -1498261 - SAR_DM Satellite Satellite -569 558 1 1 794 4196 70 82 0 chrUextra 27506495 27507068 -1497588 + Baggins1 LINE LOA 4283 4902 -551 1 794 25 31 0 0 chrUextra 27507223 27507255 -1497401 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 1463 0 21 16 chrUextra 27508514 27508701 -1495955 + NTS_DM Other Other 53 240 0 1 794 1986 0 17 13 chrUextra 27508701 27508940 -1495716 + NTS_DM Other Other 1 240 0 1 794 1247 7 14 0 chrUextra 27508940 27509087 -1495569 + NTS_DM Other Other 1 149 -91 1 794 3974 22 2 2 chrUextra 27509187 27509642 -1495014 + SSU-rRNA_Dme rRNA rRNA 1541 1995 0 1 794 2562 89 14 43 chrUextra 27509878 27510433 -1494223 - DMSAT6 Satellite Satellite 0 538 1 1 794 2641 100 5 23 chrUextra 27510533 27511106 -1493550 + DMSAT6 Satellite Satellite 1 563 -267 1 794 3567 3 0 8 chrUextra 27511207 27511597 -1493059 + DMRT1B LINE R1 4797 5183 0 1 794 1521 0 0 0 chrUextra 27511610 27511779 -1492877 + (CACAA)n Simple_repeat Simple_repeat 4 172 0 1 794 2576 100 21 5 chrUextra 27511879 27512452 -1492204 + DMSAT6 Satellite Satellite 1 581 -108 1 794 829 130 55 4 chrUextra 27512554 27513119 -1491537 + CT-rich Low_complexity Low_complexity 1 594 0 1 794 22 56 0 0 chrUextra 27513225 27513261 -1491395 + AT_rich Low_complexity Low_complexity 1 36 0 1 794 277 176 0 19 chrUextra 27513274 27513326 -1491330 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27513357 27513409 -1491247 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27513449 27513501 -1491155 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27513541 27513593 -1491063 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 936 0 0 10 chrUextra 27513694 27513798 -1490858 - LSU-rRNA_Dme rRNA rRNA 0 3900 3798 1 794 5314 0 0 2 chrUextra 27513898 27514471 -1490185 - SSU-rRNA_Dme rRNA rRNA -874 1121 550 1 794 2625 92 29 16 chrUextra 27514571 27515115 -1489541 - DMSAT6 Satellite Satellite -101 551 1 1 794 1530 16 0 0 chrUextra 27515244 27515491 -1489165 + (TATAA)n Simple_repeat Simple_repeat 1 247 0 1 794 1557 23 0 0 chrUextra 27515516 27515817 -1488839 + (TATAA)n Simple_repeat Simple_repeat 1 301 0 1 794 58 15 0 0 chrUextra 27516366 27516431 -1488225 + AT_rich Low_complexity Low_complexity 1 65 0 1 794 34 24 0 0 chrUextra 27517443 27517484 -1487172 + AT_rich Low_complexity Low_complexity 1 41 0 1 794 21 95 0 0 chrUextra 27517697 27517760 -1486896 + AT_rich Low_complexity Low_complexity 1 63 0 1 794 563 0 0 0 chrUextra 27517772 27517833 -1486823 + LSU-rRNA_Dme rRNA rRNA 1 61 -3839 1 794 841 26 0 8 chrUextra 27518605 27518722 -1485934 + NTS_DM Other Other 86 201 -39 1 794 21 57 0 0 chrUextra 27518722 27518757 -1485899 + AT_rich Low_complexity Low_complexity 1 35 0 1 794 847 28 9 27 chrUextra 27518783 27518894 -1485762 + NTS_DM Other Other 25 133 -107 1 794 826 21 0 0 chrUextra 27518894 27518990 -1485666 + NTS_DM Other Other 38 133 -107 1 794 1279 44 21 21 chrUextra 27518990 27519177 -1485479 + NTS_DM Other Other 38 224 -16 1 794 1587 4 0 0 chrUextra 27519277 27519521 -1485135 + (GAGAA)n Simple_repeat Simple_repeat 1 244 0 1 794 5204 11 0 0 chrUextra 27519949 27520521 -1484135 - DMRT1A LINE R1 -2907 2276 1705 1 794 264 190 95 60 chrUextra 27520789 27520873 -1483783 - DNAREP1_DM LINE Penelope -83 511 425 1 794 24 0 0 0 chrUextra 27520901 27520925 -1483731 + AT_rich Low_complexity Low_complexity 1 24 0 1 794 22 0 0 0 chrUextra 27521170 27521192 -1483464 + AT_rich Low_complexity Low_complexity 1 22 0 1 794 2578 189 9 7 chrUextra 27521295 27521865 -1482791 + SAR_DM Satellite Satellite 230 800 -672 1 794 5234 2 0 2 chrUextra 27521965 27522537 -1482119 - R1_DM LINE R1 -1963 3393 2823 1 794 2959 73 74 2 chrUextra 27522637 27523209 -1481447 + PROTOP DNA P 234 753 -3727 1 794 2782 169 11 11 chrUextra 27523311 27523881 -1480775 - SAR_DM Satellite Satellite -514 958 389 1 794 202 265 0 0 chrUextra 27524008 27524057 -1480599 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 794 1011 160 0 0 chrUextra 27524653 27524865 -1479791 + CT-rich Low_complexity Low_complexity 1 212 0 1 795 2549 81 28 47 chrUextra 27525325 27525895 -1478761 + DMSAT6 Satellite Satellite 1 558 -85 1 795 1521 17 0 0 chrUextra 27526315 27526495 -1478161 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 795 339 44 0 0 chrUextra 27526524 27526569 -1478087 + (GAGAA)n Simple_repeat Simple_repeat 5 49 0 1 795 851 10 0 10 chrUextra 27526669 27526770 -1477886 + LSU-rRNA_Dme rRNA rRNA 1692 1791 -2109 1 795 4002 2 0 0 chrUextra 27526812 27527241 -1477415 + LSU-rRNA_Dme rRNA rRNA 1788 2216 -1684 1 795 2547 91 10 26 chrUextra 27527341 27527913 -1476743 - DMSAT6 Satellite Satellite -68 563 1 1 795 2881 0 0 0 chrUextra 27528013 27528363 -1476293 + HMSBEAGLE_I LTR Gypsy 438 787 -5742 1 795 677 33 49 16 chrUextra 27528379 27528501 -1476155 + (TTA)n Simple_repeat Simple_repeat 3 128 0 1 795 747 12 0 0 chrUextra 27528501 27528585 -1476071 + HMSBEAGLE_I LTR Gypsy 976 1059 -5470 1 795 2394 107 7 50 chrUextra 27528686 27529229 -1475427 + DMSAT6 Satellite Satellite 1 519 -399 1 795 435 37 0 0 chrUextra 27529357 27529411 -1475245 - ARS406_DM Unknown Unknown -217 136 83 1 795 2412 190 6 6 chrUextra 27529410 27529929 -1474727 + SAR_DM Satellite Satellite 399 917 -555 1 795 450 0 0 0 chrUextra 27530029 27530079 -1474577 + (TTCTC)n Simple_repeat Simple_repeat 5 54 0 1 795 2634 175 11 12 chrUextra 27530701 27531261 -1473395 + SAR_DM Satellite Satellite 518 1076 -396 1 795 2615 92 29 34 chrUextra 27531373 27531930 -1472726 - DMSAT6 Satellite Satellite -153 553 1 1 795 4997 16 0 0 chrUextra 27532045 27532617 -1472039 - MDG1_I LTR Gypsy -3757 2839 2268 1 795 2610 101 20 14 chrUextra 27532717 27533277 -1471379 + DMSAT6 Satellite Satellite 1 562 -74 1 795 2583 183 7 25 chrUextra 27533394 27533959 -1470697 + SAR_DM Satellite Satellite 536 1090 -382 1 795 2319 14 0 78 chrUextra 27534760 27535067 -1469589 - DM176_LTR LTR Gypsy -224 283 1 1 795 2077 8 0 0 chrUextra 27535067 27535305 -1469351 - DM176_I LTR Gypsy 0 6420 6183 1 795 5054 5 49 0 chrUextra 27535405 27535977 -1468679 - DM176_I LTR Gypsy -5191 1229 630 1 795 2522 102 19 44 chrUextra 27536085 27536649 -1468007 + DMSAT6 Satellite Satellite 1 550 0 1 795 4782 33 26 0 chrUextra 27536749 27537321 -1467335 + R1_DM LINE R1 4552 5138 -218 1 795 202 265 0 0 chrUextra 27537923 27537972 -1466684 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 795 2603 167 26 19 chrUextra 27538099 27539334 -1465322 + DMSAT6 Satellite Satellite 1 1244 0 1 795 1538 179 9 8 chrUextra 27539481 27540000 -1464656 + SAR_DM Satellite Satellite 1 519 -1005 1 795 2689 87 21 12 chrUextra 27540107 27540678 -1463978 + DMSAT6 Satellite Satellite 1 576 0 1 795 2584 171 30 16 chrUextra 27541455 27542020 -1462636 - SAR_DM Satellite Satellite -478 994 422 1 795 2754 89 18 12 chrUextra 27542120 27542691 -1461965 + DMSAT6 Satellite Satellite 1 574 -69 1 795 777 178 7 7 chrUextra 27543462 27543615 -1461041 - SAR_DM Satellite Satellite -704 768 616 1 795 579 15 0 0 chrUextra 27544133 27544201 -1460455 + (TTCTC)n Simple_repeat Simple_repeat 2 69 0 1 795 360 0 0 0 chrUextra 27544804 27544844 -1459812 + (GAGAA)n Simple_repeat Simple_repeat 2 41 0 1 795 499 125 0 0 chrUextra 27545482 27545570 -1459086 - MDG1_LTR LTR Gypsy -316 126 39 1 795 1620 15 0 0 chrUextra 27545570 27545838 -1458818 + (TTA)n Simple_repeat Simple_repeat 1 268 0 1 795 463 83 12 226 chrUextra 27545842 27546043 -1458613 - MDG1_I LTR Gypsy -97 6800 6452 1 795 770 293 43 45 chrUextra 27546146 27546682 -1457974 - SAR_DM Satellite Satellite -730 742 208 1 795 5243 2 3 0 chrUextra 27546819 27547388 -1457268 - LSU-rRNA_Dme rRNA rRNA -1531 2369 1799 1 795 1736 173 12 8 chrUextra 27548162 27548730 -1455926 - SAR_DM Satellite Satellite -514 569 1 1 795 1041 97 0 0 chrUextra 27549514 27550052 -1454604 + (CAAGA)n Simple_repeat Simple_repeat 1 538 0 1 795 258 81 0 0 chrUextra 27550677 27550714 -1453942 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 795 894 10 0 0 chrUextra 27550843 27550946 -1453710 + R2_DM LINE R2 3505 3607 0 1 795 663 38 0 12 chrUextra 27550957 27551037 -1453619 + LSU-rRNA_Dme rRNA rRNA 2578 2656 -1244 1 795 3548 5 0 0 chrUextra 27551028 27551414 -1453242 + R1_DM LINE R1 4828 5213 -143 1 795 5307 0 2 2 chrUextra 27551514 27552085 -1452571 + LSU-rRNA_Dme rRNA rRNA 3038 3608 -292 1 795 2867 166 9 5 chrUextra 27552856 27553424 -1451232 - SAR_DM Satellite Satellite -610 862 293 1 795 5254 0 0 2 chrUextra 27553527 27554098 -1450558 - R1_DM LINE R1 -3149 2207 1638 1 795 1354 62 0 15 chrUextra 27554226 27554769 -1449887 + (AATAG)n Simple_repeat Simple_repeat 1 535 0 1 795 960 0 0 0 chrUextra 27554869 27554971 -1449685 - LSU-rRNA_Dme rRNA rRNA -2011 1889 1788 1 795 3826 2 7 2 chrUextra 27555012 27555440 -1449216 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1362 1 795 4608 30 0 2 chrUextra 27555540 27556111 -1448545 - ROO_I LTR Pao -35 8221 7652 1 795 34 24 0 0 chrUextra 27556386 27556427 -1448229 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 514 133 80 0 chrUextra 27556438 27556551 -1448105 - TART LINE telomeric -3986 10491 10370 1 795 609 249 96 18 chrUextra 27556551 27556780 -1447876 - TAHRE LINE telomeric -374 10089 9843 1 795 2446 176 35 25 chrUextra 27556888 27557453 -1447203 - SAR_DM Satellite Satellite -696 776 206 1 795 4659 0 0 47 chrUextra 27557553 27558124 -1446532 + LSU-rRNA_Dme rRNA rRNA 152 695 -3205 1 795 5099 21 0 0 chrUextra 27558224 27558795 -1445861 - DMCR1A LINE CR1 -1545 2925 2355 1 795 5170 0 3 2 chrUextra 27558895 27559466 -1445190 + R1_DM LINE R1 2544 3115 -2241 1 795 4905 21 45 0 chrUextra 27559566 27560137 -1444519 - R1_DM LINE R1 -753 4603 4007 1 795 5002 25 0 0 chrUextra 27560238 27560807 -1443849 + R1_DM LINE R1 2368 2936 -2420 1 795 5311 0 3 0 chrUextra 27560907 27561477 -1443179 - LSU-rRNA_Dme rRNA rRNA -32 3868 3297 1 795 34 24 0 0 chrUextra 27561782 27561823 -1442833 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 21 95 0 0 chrUextra 27562036 27562099 -1442557 + AT_rich Low_complexity Low_complexity 1 63 0 1 795 316 0 0 0 chrUextra 27562111 27562147 -1442509 + LSU-rRNA_Dme rRNA rRNA 1 36 -3864 1 795 1283 19 0 12 chrUextra 27562247 27562410 -1442246 - NTS_DM Other Other -42 198 38 1 795 945 0 0 27 chrUextra 27562410 27562522 -1442134 - NTS_DM Other Other -107 133 25 1 795 1332 18 0 6 chrUextra 27562574 27562739 -1441917 - NTS_DM Other Other -39 201 38 1 795 606 13 0 13 chrUextra 27562739 27562817 -1441839 - NTS_DM Other Other -107 133 57 1 795 1603 152 12 7 chrUextra 27562917 27563487 -1441169 + SAR_DM Satellite Satellite 1 572 -841 1 795 776 0 0 0 chrUextra 27564257 27564340 -1440316 - R1_DM LINE R1 -434 4922 4840 1 795 4554 2 0 0 chrUextra 27564337 27564827 -1439829 - LSU-rRNA_Dme rRNA rRNA -1262 2638 2149 1 795 403 22 0 0 chrUextra 27564927 27564972 -1439684 - NTS_DM Other Other -195 45 1 1 795 1863 21 17 17 chrUextra 27564972 27565212 -1439444 - NTS_DM Other Other 0 240 1 1 795 1858 21 17 17 chrUextra 27565212 27565452 -1439204 - NTS_DM Other Other 0 240 1 1 795 249 0 89 67 chrUextra 27565452 27565497 -1439159 - NTS_DM Other Other 0 240 195 1 795 1284 32 0 0 chrUextra 27565598 27565752 -1438904 - NTS_DM Other Other -86 154 1 1 795 1834 21 17 21 chrUextra 27565752 27565993 -1438663 - NTS_DM Other Other 0 240 1 1 795 1178 41 23 23 chrUextra 27565993 27566167 -1438489 - NTS_DM Other Other 0 240 67 1 795 5198 0 2 5 chrUextra 27566267 27566837 -1437819 + SSU-rRNA_Dme rRNA rRNA 803 1370 -625 1 795 5017 5 0 2 chrUextra 27566937 27567507 -1437149 - DM297_I LTR Gypsy -948 5219 4651 1 795 5218 2 2 3 chrUextra 27567607 27568177 -1436479 - SSU-rRNA_Dme rRNA rRNA -277 1718 1150 1 795 4661 33 0 0 chrUextra 27568279 27568824 -1435832 + G2_DM LINE Jockey 2547 3091 -11 1 795 2469 188 33 2 chrUextra 27569640 27570183 -1434473 + SAR_DM Satellite Satellite 332 891 -581 1 795 5065 3 0 3 chrUextra 27570287 27570857 -1433799 + LSU-rRNA_Dme rRNA rRNA 488 1055 -2845 1 795 4953 21 2 2 chrUextra 27570959 27571527 -1433129 - R1_DM LINE R1 -1378 3978 3411 1 795 2837 89 12 14 chrUextra 27571628 27572197 -1432459 + DMSAT6 Satellite Satellite 1 568 -108 1 795 3875 11 121 2 chrUextra 27572297 27572867 -1431789 + R1_DM LINE R1 3515 4152 -1204 1 795 2179 202 33 11 chrUextra 27572967 27573537 -1431119 - SAR_DM Satellite Satellite -682 790 208 1 795 1804 0 10 0 chrUextra 27573643 27573838 -1430818 + LSU-rRNA_Dme rRNA rRNA 2452 2648 -1252 1 795 3254 13 0 3 chrUextra 27573835 27574207 -1430449 + R1_DM LINE R1 515 885 -4471 1 795 2643 177 11 7 chrUextra 27574307 27574875 -1429781 + SAR_DM Satellite Satellite 301 870 -602 1 795 2703 180 28 14 chrUextra 27575647 27576216 -1428440 + SAR_DM Satellite Satellite 429 1005 -467 1 795 1620 0 0 0 chrUextra 27576987 27577295 -1427361 + (CAAAA)n Simple_repeat Simple_repeat 1 308 0 1 795 648 0 0 0 chrUextra 27578155 27578227 -1426429 + (GAGAA)n Simple_repeat Simple_repeat 2 73 0 1 795 280 59 0 0 chrUextra 27578997 27579031 -1425625 - BATUMI_I LTR Pao -4075 3888 3855 1 795 364 70 0 50 chrUextra 27579043 27579100 -1425556 - BATUMI_I LTR Pao -908 7055 7002 1 795 3515 67 0 4 chrUextra 27579100 27579552 -1425104 - BATUMI_I LTR Pao 0 7963 7514 1 795 30 0 0 0 chrUextra 27579737 27579767 -1424889 + AT_rich Low_complexity Low_complexity 1 30 0 1 795 28 48 0 0 chrUextra 27580095 27580137 -1424519 + AT_rich Low_complexity Low_complexity 1 42 0 1 795 4642 19 2 2 chrUextra 27580337 27580907 -1423749 - IDEFIX_I LTR Gypsy -221 5407 4838 1 795 237 33 0 0 chrUextra 27581307 27581337 -1423319 + (A)n Simple_repeat Simple_repeat 1 30 0 1 795 408 0 134 0 chrUextra 27581680 27581792 -1422864 + (GA)n Simple_repeat Simple_repeat 2 128 0 1 795 5203 2 2 2 chrUextra 27582347 27582917 -1421739 - R1_DM LINE R1 -3191 2165 1596 1 795 4647 55 3 0 chrUextra 27583687 27584256 -1420400 - BATUMI_I LTR Pao -3024 4939 4369 1 795 5282 2 2 2 chrUextra 27584356 27584925 -1419731 + LSU-rRNA_Dme rRNA rRNA 2966 3534 -366 1 795 1620 0 0 0 chrUextra 27585025 27585239 -1419417 + (CAAGA)n Simple_repeat Simple_repeat 1 214 0 1 795 2558 105 15 50 chrUextra 27585697 27586239 -1418417 - DMSAT6 Satellite Satellite -147 523 1 1 795 531 0 0 0 chrUextra 27586363 27586422 -1418234 + (CAATA)n Simple_repeat Simple_repeat 2 60 0 1 795 1503 42 2 0 chrUextra 27586428 27586932 -1417724 + (AATAG)n Simple_repeat Simple_repeat 1 505 0 1 795 5195 0 3 3 chrUextra 27587032 27587601 -1417055 + SSU-rRNA_Dme rRNA rRNA 1129 1697 -298 1 795 2466 89 18 47 chrUextra 27587701 27588260 -1416396 - DMSAT6 Satellite Satellite -73 543 1 1 795 4890 25 0 2 chrUextra 27588370 27588936 -1415720 + NINJA_I LTR Pao 320 884 -5127 1 795 2297 19 22 0 chrUextra 27589039 27589309 -1415347 + QUASIMODO_LTR LTR Gypsy 248 523 -135 1 795 2717 3 0 0 chrUextra 27589308 27589608 -1415048 + QUASIMODO_I LTR Gypsy 1850 2149 -3911 1 795 1620 0 0 0 chrUextra 27591048 27591408 -1413248 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 795 21 89 0 0 chrUextra 27591924 27591980 -1412676 + AT_rich Low_complexity Low_complexity 1 56 0 1 795 2617 0 3 3 chrUextra 27591999 27592284 -1412372 - SSU-rRNA_Dme rRNA rRNA 0 1995 1711 1 795 3494 0 0 23 chrUextra 27592384 27592782 -1411874 - Stalker2_LTR LTR Gypsy -35 389 1 1 795 1272 12 0 0 chrUextra 27592782 27592950 -1411706 - Stalker2_I LTR Gypsy 0 7402 7235 1 795 371 218 27 71 chrUextra 27593053 27593236 -1411420 + (CAGA)n Simple_repeat Simple_repeat 2 176 0 1 795 299 200 90 36 chrUextra 27593419 27593585 -1411071 + (CAAGA)n Simple_repeat Simple_repeat 3 177 0 1 795 2500 99 11 32 chrUextra 27594392 27594959 -1409697 - DMSAT6 Satellite Satellite -82 554 1 1 795 27 29 0 0 chrUextra 27595243 27595277 -1409379 + AT_rich Low_complexity Low_complexity 1 34 0 1 795 2806 166 16 7 chrUextra 27595729 27596295 -1408361 - SAR_DM Satellite Satellite -620 852 282 1 795 1114 20 0 7 chrUextra 27596398 27596545 -1408111 + NTS_DM Other Other 56 201 -39 1 795 898 9 0 35 chrUextra 27596597 27596710 -1407946 + NTS_DM Other Other 25 133 -107 1 795 1332 18 0 6 chrUextra 27596710 27596875 -1407781 + NTS_DM Other Other 38 201 -39 1 795 307 0 0 75 chrUextra 27596927 27596967 -1407689 + NTS_DM Other Other 25 61 -179 1 795 2730 171 19 11 chrUextra 27597067 27597636 -1407020 + SAR_DM Satellite Satellite 446 1019 -453 1 795 232 183 32 48 chrUextra 27597736 27597799 -1406857 + HETRP_DM Satellite Satellite 1623 1684 -188 1 795 721 184 13 26 chrUextra 27597927 27598083 -1406573 + HETRP_DM Satellite Satellite 1529 1682 -190 1 795 210 37 0 0 chrUextra 27598227 27598254 -1406402 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 795 234 132 0 0 chrUextra 27598254 27598292 -1406364 + HETRP_DM Satellite Satellite 1549 1586 -286 1 795 3015 34 3 3 chrUextra 27599074 27599628 -1405028 - R1_DM LINE R1 -1314 4042 3456 1 795 789 41 0 0 chrUextra 27599743 27599840 -1404816 + (CACAA)n Simple_repeat Simple_repeat 2 98 0 1 795 2005 5 0 0 chrUextra 27599840 27600061 -1404595 - DMRT1B LINE R1 -140 5043 4823 1 795 2310 0 4 0 chrUextra 27600057 27600311 -1404345 - DMRT1B LINE R1 -1103 4080 3826 1 795 1620 0 0 0 chrUextra 27600411 27600860 -1403796 + (GAGAA)n Simple_repeat Simple_repeat 1 449 0 1 795 316 320 20 85 chrUextra 27601394 27601640 -1403016 + ACCORD2_I LTR Gypsy 526 755 -6457 1 795 4404 63 44 0 chrUextra 27601747 27602315 -1402341 - R1_DM LINE R1 -4758 598 6 1 795 2697 91 12 36 chrUextra 27602416 27602976 -1401680 + DMSAT6 Satellite Satellite 1 547 -130 1 795 492 0 18 0 chrUextra 27603083 27603139 -1401517 + LSU-rRNA_Dme rRNA rRNA 3844 3900 0 1 795 266 196 0 19 chrUextra 27603241 27603293 -1401363 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 795 266 196 0 19 chrUextra 27603333 27603385 -1401271 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 795 277 176 0 19 chrUextra 27603416 27603468 -1401188 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 795 22 56 0 0 chrUextra 27603481 27603517 -1401139 + AT_rich Low_complexity Low_complexity 1 36 0 1 795 898 10 0 28 chrUextra 27603543 27603651 -1401005 + NTS_DM Other Other 25 129 -111 1 795 513 182 175 0 chrUextra 27603751 27603877 -1400779 + XDMR Unknown Unknown 214 361 0 1 795 2682 173 13 7 chrUextra 27603769 27604317 -1400339 - SAR_DM Satellite Satellite -649 823 273 1 795 2837 278 42 64 chrUextra 27605089 27606295 -1398361 + SAR_DM Satellite Satellite 90 1269 -203 1 795 926 62 0 15 chrUextra 27606191 27606323 -1398333 - ARS406_DM Unknown Unknown -164 189 60 1 795 34 24 0 0 chrUextra 27606916 27606957 -1397699 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 1603 10 0 109 chrUextra 27607091 27607312 -1397344 - DOC6_DM LINE Jockey -4025 197 1 1 795 408 0 0 136 chrUextra 27607312 27607488 -1397168 + (TTA)n Simple_repeat Simple_repeat 3 154 0 1 795 551 0 131 6 chrUextra 27607499 27607659 -1396997 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 795 279 0 0 0 chrUextra 27607759 27607790 -1396866 + (GAGAA)n Simple_repeat Simple_repeat 2 32 0 1 795 2482 96 7 44 chrUextra 27608451 27608995 -1395661 + DMSAT6 Satellite Satellite 1 523 0 1 795 454 113 0 0 chrUextra 27609095 27609166 -1395490 - ARS406_DM Unknown Unknown -282 71 1 1 795 2420 184 13 13 chrUextra 27609119 27609663 -1394993 + SAR_DM Satellite Satellite 239 782 -690 1 795 230 286 20 35 chrUextra 27610080 27610283 -1394373 - ZAM_I LTR Gypsy -819 6671 6472 1 795 2563 185 5 13 chrUextra 27611110 27611667 -1392989 - SAR_DM Satellite Satellite -396 1076 524 1 795 3036 156 11 7 chrUextra 27611767 27612335 -1392321 + SAR_DM Satellite Satellite 353 922 -550 1 795 406 19 0 0 chrUextra 27612438 27612490 -1392166 + ACCORD2_I LTR Gypsy 1723 1774 -5438 1 795 1116 22 223 16 chrUextra 27612501 27612685 -1391971 + ACCORD2_I LTR Gypsy 1553 1774 -5438 1 795 680 58 0 0 chrUextra 27612678 27612762 -1391894 + ACCORD2_I LTR Gypsy 7122 7205 -7 1 795 1885 14 0 18 chrUextra 27612762 27612980 -1391676 + ACCORD2_LTR LTR Gypsy 1 214 -1 1 795 5096 19 2 0 chrUextra 27613103 27613671 -1390985 + BS LINE Jockey 2069 2637 -2489 1 795 953 10 0 0 chrUextra 27613771 27613875 -1390781 - NTS_DM Other Other -136 104 1 1 795 1899 17 17 17 chrUextra 27613875 27614115 -1390541 - NTS_DM Other Other 0 240 1 1 795 1727 18 18 18 chrUextra 27614115 27614339 -1390317 - NTS_DM Other Other 0 240 17 1 795 4548 46 39 2 chrUextra 27614439 27615007 -1389649 + IDEFIX_I LTR Gypsy 1012 1600 -4028 1 795 856 106 12 19 chrUextra 27615775 27616341 -1388315 + RSP Satellite Satellite 1 562 0 1 795 5108 0 0 3 chrUextra 27616443 27617011 -1387645 - ROO_I LTR Pao -3915 4341 3776 1 795 1829 9 14 0 chrUextra 27617116 27617328 -1387328 - NTS_DM Other Other -25 215 1 1 795 1992 4 17 13 chrUextra 27617328 27617567 -1387089 - NTS_DM Other Other 0 240 1 1 795 794 9 36 27 chrUextra 27617567 27617679 -1386977 - NTS_DM Other Other 0 240 128 1 795 5181 5 0 0 chrUextra 27617789 27618347 -1386309 + SSU-rRNA_Dme rRNA rRNA 1 558 -1437 1 795 5194 0 0 0 chrUextra 27618449 27619014 -1385642 + ROO_I LTR Pao 4003 4567 -3689 1 795 5141 2 3 3 chrUextra 27619114 27619681 -1384975 + LSU-rRNA_Dme rRNA rRNA 825 1391 -2509 1 795 4801 0 0 0 chrUextra 27620448 27620971 -1383685 - R1_DM LINE R1 -1977 3379 2857 1 795 461 0 0 0 chrUextra 27620966 27621015 -1383641 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2606 1 795 2546 186 14 14 chrUextra 27621115 27621682 -1382974 + SAR_DM Satellite Satellite 229 795 -677 1 795 22 56 0 0 chrUextra 27621810 27621846 -1382810 + AT_rich Low_complexity Low_complexity 1 36 0 1 795 3999 2 2 0 chrUextra 27621918 27622349 -1382307 - LSU-rRNA_Dme rRNA rRNA 0 3900 3469 1 795 2466 87 41 7 chrUextra 27622449 27623008 -1381648 - DMSAT6 Satellite Satellite -79 578 1 1 795 4558 29 7 11 chrUextra 27623783 27624344 -1380312 - BATUMI_I LTR Pao -978 6985 6427 1 795 329 27 0 0 chrUextra 27624450 27624487 -1380169 - NTS_DM Other Other -203 37 1 1 795 1444 35 20 25 chrUextra 27624487 27624691 -1379965 - NTS_DM Other Other 0 240 38 1 795 832 21 0 0 chrUextra 27624691 27624787 -1379869 - NTS_DM Other Other -107 133 38 1 795 808 46 9 27 chrUextra 27624787 27624898 -1379758 - NTS_DM Other Other -107 133 25 1 795 403 36 0 18 chrUextra 27624960 27625017 -1379639 - NTS_DM Other Other -39 201 146 1 795 4729 39 2 2 chrUextra 27625117 27625684 -1378972 - R1_DM LINE R1 -10 5346 4780 1 795 1539 0 0 0 chrUextra 27625784 27625955 -1378701 + (TAGA)n Simple_repeat Simple_repeat 1 171 0 1 795 3455 15 2 2 chrUextra 27626451 27626846 -1377810 + DM176_LTR LTR Gypsy 113 507 0 1 795 1047 135 0 0 chrUextra 27626848 27627018 -1377638 + (TA)n Simple_repeat Simple_repeat 1 170 0 1 795 34 24 0 0 chrUextra 27627493 27627534 -1377122 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 2895 161 13 7 chrUextra 27627798 27628350 -1376306 + SAR_DM Satellite Satellite 369 923 -549 1 795 2399 97 34 9 chrUextra 27629119 27629682 -1374974 + DMSAT6 Satellite Satellite 1 577 -96 1 795 2474 191 28 21 chrUextra 27629786 27630981 -1373675 + DMSAT6 Satellite Satellite 1 1203 -3 1 795 4156 35 8 0 chrUextra 27631120 27631628 -1373028 - IDEFIX_I LTR Gypsy -5116 512 1 1 795 202 265 0 0 chrUextra 27631806 27631855 -1372801 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 795 4908 3 11 0 chrUextra 27632454 27633021 -1371635 - QUASIMODO_I LTR Gypsy -1355 4705 4133 1 795 1737 120 73 61 chrUextra 27633138 27633466 -1371190 + STALKER4_LTR LTR Gypsy 42 373 -29 1 795 907 135 0 19 chrUextra 27633529 27633688 -1370968 - Stalker2_I LTR Gypsy -4485 2917 2762 1 795 3395 20 13 5 chrUextra 27633788 27634182 -1370474 - LSU-rRNA_Dme rRNA rRNA -1716 2184 1788 1 795 1025 16 8 15 chrUextra 27634223 27634354 -1370302 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1662 1 795 2805 178 11 5 chrUextra 27634455 27635021 -1369635 - SAR_DM Satellite Satellite -655 817 249 1 795 1231 87 11 0 chrUextra 27636455 27636731 -1367925 + (CTATT)n Simple_repeat Simple_repeat 1 279 0 1 795 1449 47 4 0 chrUextra 27636761 27637019 -1367637 + (CTATT)n Simple_repeat Simple_repeat 1 259 0 1 795 1362 6 28 17 chrUextra 27637119 27637299 -1367357 + NTS_DM Other Other 59 240 0 1 795 1922 13 17 17 chrUextra 27637299 27637539 -1367117 + NTS_DM Other Other 1 240 0 1 795 1303 7 0 0 chrUextra 27637539 27637685 -1366971 + NTS_DM Other Other 1 146 -94 1 795 5260 3 0 0 chrUextra 27637785 27638351 -1366305 + LSU-rRNA_Dme rRNA rRNA 2027 2592 -1308 1 795 511 45 0 132 chrUextra 27638457 27638661 -1365995 + A-rich Low_complexity Low_complexity 2 178 0 1 795 588 6 0 137 chrUextra 27638687 27638892 -1365764 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 1 795 361 141 135 0 chrUextra 27638844 27639000 -1365656 + (CAAA)n Simple_repeat Simple_repeat 3 179 0 1 795 4966 14 0 0 chrUextra 27639117 27639680 -1364976 - Gypsy4_I LTR Gypsy -840 5448 4886 1 795 1004 60 5 16 chrUextra 27640449 27641014 -1363642 + RSP Satellite Satellite 1 559 0 1 795 312 100 0 39 chrUextra 27641156 27641202 -1363454 - Gypsy_LTR LTR Gypsy -87 395 352 1 795 1822 109 3 147 chrUextra 27641202 27641577 -1363079 - Stalker3_LTR LTR Gypsy 0 372 52 1 795 269 65 36 14 chrUextra 27641600 27641674 -1362982 - STALKER4_I LTR Gypsy -5 6525 6491 1 795 1776 172 16 5 chrUextra 27641782 27642347 -1362309 + SAR_DM Satellite Satellite 1 570 -558 1 795 2556 182 6 20 chrUextra 27642449 27642999 -1361657 - SAR_DM Satellite Satellite -365 1107 566 1 795 2653 176 16 25 chrUextra 27643114 27643679 -1360977 + SAR_DM Satellite Satellite 469 1028 -444 1 795 1158 122 0 0 chrUextra 27643798 27643978 -1360678 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 795 570 0 50 38 chrUextra 27644445 27644525 -1360131 + NTS_DM Other Other 160 240 0 1 795 1992 4 17 13 chrUextra 27644525 27644764 -1359892 + NTS_DM Other Other 1 240 0 1 795 1968 8 17 13 chrUextra 27644764 27645003 -1359653 + NTS_DM Other Other 1 240 0 1 795 4706 48 3 0 chrUextra 27645111 27645677 -1358979 + Stalker2_I LTR Gypsy 3855 4422 -2980 1 795 2706 176 9 14 chrUextra 27645777 27646342 -1358314 + SAR_DM Satellite Satellite 476 1037 -435 1 795 5202 3 2 0 chrUextra 27646442 27647007 -1357649 - SSU-rRNA_Dme rRNA rRNA -937 1058 493 1 795 2666 179 55 7 chrUextra 27647107 27647671 -1356985 + SAR_DM Satellite Satellite 447 1037 -435 1 795 395 0 0 162 chrUextra 27648495 27648848 -1355808 + (CATAG)n Simple_repeat Simple_repeat 1 295 0 1 795 4074 82 2 2 chrUextra 27649102 27649666 -1354990 - STALKER4_I LTR Gypsy -314 6216 5653 1 795 281 338 129 7 chrUextra 27649845 27650131 -1354525 - BLASTOPIA_I LTR Gypsy -1 4480 4160 1 795 2386 118 20 7 chrUextra 27650432 27650996 -1353660 - DMSAT6 Satellite Satellite -45 571 1 1 795 2720 183 23 25 chrUextra 27651115 27652327 -1352329 + DMSAT6 Satellite Satellite 1 1208 0 1 795 2403 93 30 30 chrUextra 27652427 27652990 -1351666 + DMSAT6 Satellite Satellite 1 563 -46 1 795 1587 30 0 0 chrUextra 27653092 27653656 -1351000 + (TAGA)n Simple_repeat Simple_repeat 1 564 0 1 795 1514 26 0 6 chrUextra 27654645 27654987 -1349669 + (CTATT)n Simple_repeat Simple_repeat 1 340 0 1 795 2542 115 25 5 chrUextra 27655087 27655652 -1349004 - DMSAT6 Satellite Satellite -3 576 1 1 99 2449 102 16 19 chrUextra 27655754 27656316 -1348340 + DMSAT6 Satellite Satellite 1 560 -119 1 796 2766 181 7 5 chrUextra 27656422 27656982 -1347674 + SAR_DM Satellite Satellite 238 798 -674 1 796 1349 47 15 25 chrUextra 27657082 27657279 -1347377 - NTS_DM Other Other -8 232 38 1 796 757 42 11 0 chrUextra 27657279 27657374 -1347282 - NTS_DM Other Other -107 133 38 1 796 741 76 19 0 chrUextra 27657374 27657479 -1347177 - NTS_DM Other Other -107 133 27 1 796 21 57 0 0 chrUextra 27657510 27657545 -1347111 + AT_rich Low_complexity Low_complexity 1 35 0 1 796 677 40 10 10 chrUextra 27657545 27657647 -1347009 - NTS_DM Other Other -39 201 100 1 796 202 265 0 0 chrUextra 27658437 27658486 -1346170 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 796 4899 14 2 2 chrUextra 27659077 27659642 -1345014 + R1_DM LINE R1 2677 3241 -2115 1 796 1186 7 14 7 chrUextra 27659742 27659886 -1344770 + LSU-rRNA_Dme rRNA rRNA 1647 1791 -2109 1 796 3561 0 0 0 chrUextra 27659928 27660307 -1344349 + LSU-rRNA_Dme rRNA rRNA 1788 2166 -1734 1 796 5109 0 2 0 chrUextra 27661071 27661635 -1343021 - ROO_I LTR Pao -4540 3716 3152 1 796 2486 118 9 49 chrUextra 27661747 27662298 -1342358 + DMSAT6 Satellite Satellite 1 528 -3 1 796 1488 44 0 0 chrUextra 27662400 27662760 -1341896 + (ATAAG)n Simple_repeat Simple_repeat 1 360 0 1 796 1067 84 0 6 chrUextra 27662782 27662961 -1341695 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 1 796 2526 93 24 20 chrUextra 27663063 27663614 -1341042 + DMSAT6 Satellite Satellite 1 552 -85 1 796 1620 18 0 0 chrUextra 27663729 27664119 -1340537 + (TTCTC)n Simple_repeat Simple_repeat 1 390 0 1 796 330 19 98 36 chrUextra 27664130 27664242 -1340414 + GA-rich Low_complexity Low_complexity 2 120 0 1 796 5016 6 2 0 chrUextra 27664394 27664942 -1339714 + DOC LINE Jockey 2227 2775 -1950 1 796 1309 58 0 17 chrUextra 27665721 27665896 -1338760 + BATUMI_I LTR Pao 7792 7963 0 1 796 1818 46 8 29 chrUextra 27665918 27666164 -1338492 + BATUMI_LTR LTR Pao 32 272 0 1 796 821 17 0 34 chrUextra 27666164 27666283 -1338373 + (TTATA)n Simple_repeat Simple_repeat 5 119 0 1 796 3911 248 22 53 chrUextra 27666385 27667611 -1337045 - SAR_DM Satellite Satellite -219 1253 66 1 796 2927 169 5 2 chrUextra 27667714 27668272 -1336384 - SAR_DM Satellite Satellite -581 891 332 1 796 1560 141 0 0 chrUextra 27668407 27668655 -1336001 - IDEFIX_I LTR Gypsy -1593 4035 3788 1 796 1551 145 67 10 chrUextra 27668639 27668939 -1335717 - IDEFIX_I LTR Gypsy -2171 3457 3141 1 796 2570 87 16 27 chrUextra 27669039 27669600 -1335056 + DMSAT6 Satellite Satellite 1 554 -149 1 796 3517 27 2 11 chrUextra 27669703 27670148 -1334508 + IDEFIX_I LTR Gypsy 5188 5628 0 1 796 1031 8 0 0 chrUextra 27670148 27670267 -1334389 + IDEFIX_LTR LTR Gypsy 1 119 -475 1 796 4309 2 0 47 chrUextra 27670367 27670824 -1333832 - DM176_I LTR Gypsy -5447 973 527 1 796 208 28 26 53 chrUextra 27670824 27670862 -1333794 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1 796 4309 2 0 47 chrUextra 27670862 27670931 -1333725 - DM176_I LTR Gypsy -5894 526 472 1 796 1271 40 17 11 chrUextra 27671031 27671210 -1333446 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 796 796 115 28 28 chrUextra 27671220 27671399 -1333257 + CT-rich Low_complexity Low_complexity 1 179 0 1 796 908 97 22 28 chrUextra 27671404 27671584 -1333072 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 796 1028 0 0 0 chrUextra 27671695 27671806 -1332850 - NTS_DM Other Other -129 111 1 1 796 1958 8 17 13 chrUextra 27671806 27672045 -1332611 - NTS_DM Other Other 0 240 1 1 796 1606 24 19 19 chrUextra 27672045 27672259 -1332397 - NTS_DM Other Other 0 240 27 1 796 4864 37 0 0 chrUextra 27672360 27672923 -1331733 - DIVER_I LTR Pao -3847 1796 1234 1 796 5256 2 0 0 chrUextra 27673687 27674251 -1330405 + LSU-rRNA_Dme rRNA rRNA 2751 3314 -586 1 796 5192 0 0 2 chrUextra 27674351 27674915 -1329741 + R1_DM LINE R1 1647 2209 -3147 1 796 2616 40 0 15 chrUextra 27675015 27675343 -1329313 + PROTOP DNA P 4158 4480 0 1 796 799 126 154 0 chrUextra 27675343 27675486 -1329170 - DNAREP1_DM LINE Penelope -20 574 410 1 796 514 100 0 0 chrUextra 27675480 27675550 -1329106 - DNAREP1_DM LINE Penelope -490 104 35 1 796 2715 169 12 11 chrUextra 27675679 27676237 -1328419 + SAR_DM Satellite Satellite 412 970 -502 1 796 3365 5 0 0 chrUextra 27676343 27676714 -1327942 - G6_DM LINE Jockey -1671 371 1 1 796 5269 0 0 2 chrUextra 27677007 27677571 -1327085 - SSU-rRNA_Dme rRNA rRNA -1149 846 284 1 796 2511 52 8 7 chrUextra 27677671 27678018 -1326638 + QUASIMODO_I LTR Gypsy 4981 5275 -785 1 796 551 0 124 12 chrUextra 27678027 27678188 -1326468 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 796 42 0 0 0 chrUextra 27678193 27678235 -1326421 + AT_rich Low_complexity Low_complexity 1 42 0 1 796 2728 177 11 7 chrUextra 27678335 27678899 -1325757 + SAR_DM Satellite Satellite 256 821 -651 1 796 1233 18 18 18 chrUextra 27678999 27679167 -1325489 + NTS_DM Other Other 73 240 0 1 796 1388 6 0 18 chrUextra 27679167 27679332 -1325324 + NTS_DM Other Other 1 162 -78 1 796 532 119 36 0 chrUextra 27679442 27679526 -1325130 + NTS_DM Other Other 4 90 -150 1 796 2685 96 14 25 chrUextra 27679663 27680227 -1324429 + DMSAT6 Satellite Satellite 1 558 0 1 796 4817 27 9 3 chrUextra 27680327 27680891 -1323765 + DMCR1A LINE CR1 2808 3374 -1096 1 796 3290 3 0 0 chrUextra 27680991 27681347 -1323309 + LSU-rRNA_Dme rRNA rRNA 2229 2584 -1316 1 796 2010 0 0 0 chrUextra 27681340 27681554 -1323102 + R2_DM LINE R2 1043 1256 -2351 1 796 2671 85 26 20 chrUextra 27681674 27682217 -1322439 + DMSAT6 Satellite Satellite 1 545 0 1 796 4277 62 50 0 chrUextra 27682980 27683543 -1321113 + TART_B1 LINE telomeric 2864 3454 -7200 1 796 2698 171 9 14 chrUextra 27683643 27684206 -1320450 + SAR_DM Satellite Satellite 409 968 -504 1 796 29 70 0 0 chrUextra 27684306 27684363 -1320293 + AT_rich Low_complexity Low_complexity 1 57 0 1 796 22 0 0 0 chrUextra 27684474 27684496 -1320160 + AT_rich Low_complexity Low_complexity 1 22 0 1 796 2388 40 0 0 chrUextra 27684567 27684869 -1319787 - DOC LINE Jockey 0 4725 4424 1 796 1955 8 17 13 chrUextra 27684972 27685211 -1319445 - NTS_DM Other Other 0 240 1 1 796 1986 0 17 13 chrUextra 27685211 27685450 -1319206 - NTS_DM Other Other 0 240 1 1 796 576 0 49 37 chrUextra 27685450 27685532 -1319124 - NTS_DM Other Other 0 240 158 1 796 1620 0 0 0 chrUextra 27685651 27685831 -1318825 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 796 1620 0 0 0 chrUextra 27686295 27686524 -1318132 + (GAGAA)n Simple_repeat Simple_repeat 1 229 0 1 796 2600 84 16 43 chrUextra 27686958 27687520 -1317136 - DMSAT6 Satellite Satellite -90 546 1 1 796 3398 28 0 0 chrUextra 27687621 27688017 -1316639 + MDG1_LTR LTR Gypsy 47 442 0 1 796 1330 20 0 0 chrUextra 27688032 27688184 -1316472 + MDG1_LTR LTR Gypsy 230 381 -61 1 796 1464 34 0 0 chrUextra 27688285 27688463 -1316193 + (TTATA)n Simple_repeat Simple_repeat 3 180 0 1 796 609 14 0 0 chrUextra 27688463 27688533 -1316123 + (CATTA)n Simple_repeat Simple_repeat 1 70 0 1 796 2759 164 11 9 chrUextra 27688954 27689507 -1315149 - SAR_DM Satellite Satellite -593 879 326 1 796 1043 77 10 18 chrUextra 27689610 27690167 -1314489 - RSP Satellite Satellite -83 553 1 1 796 2514 103 13 24 chrUextra 27690273 27690825 -1313831 + DMSAT6 Satellite Satellite 1 545 -65 1 796 2712 0 7 0 chrUextra 27690936 27691230 -1313426 + SSU-rRNA_Dme rRNA rRNA 1700 1995 0 1 796 21 89 0 0 chrUextra 27691249 27691305 -1313351 + AT_rich Low_complexity Low_complexity 1 56 0 1 796 4962 2 2 2 chrUextra 27691599 27692162 -1312494 + ROO_I LTR Pao 1735 2297 -5959 1 796 2680 163 15 9 chrUextra 27692263 27692808 -1311848 - SAR_DM Satellite Satellite -555 917 370 1 796 5189 2 0 0 chrUextra 27694910 27695472 -1309184 - R1_DM LINE R1 -3354 2002 1441 1 796 711 0 0 0 chrUextra 27695572 27695651 -1309005 + (GAGAA)n Simple_repeat Simple_repeat 2 80 0 1 796 2413 108 23 21 chrUextra 27696235 27696796 -1307860 - DMSAT6 Satellite Satellite 0 561 1 1 796 4545 54 2 7 chrUextra 27696896 27697458 -1307198 - BATUMI_I LTR Pao -3981 3982 3424 1 796 4283 16 34 18 chrUextra 27697565 27698120 -1306536 - MDG1_I LTR Gypsy -5367 1229 666 1 796 420 20 0 0 chrUextra 27698220 27698269 -1306387 + (TTCTC)n Simple_repeat Simple_repeat 5 53 0 1 796 669 268 53 48 chrUextra 27699008 27699444 -1305212 - SAR_DM Satellite Satellite -570 902 465 1 796 3528 0 0 0 chrUextra 27699544 27699921 -1304735 + LSU-rRNA_Dme rRNA rRNA 3524 3900 0 1 796 266 196 0 19 chrUextra 27700022 27700074 -1304582 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 796 5143 7 0 2 chrUextra 27700206 27700768 -1303888 + SSU-rRNA_Dme rRNA rRNA 409 969 -1026 1 796 1620 3 0 0 chrUextra 27700868 27701215 -1303441 + (GAGAA)n Simple_repeat Simple_repeat 1 347 0 1 796 2553 94 27 11 chrUextra 27701530 27702059 -1302597 - DMSAT6 Satellite Satellite -79 537 1 1 796 2528 89 23 21 chrUextra 27702193 27702754 -1301902 - DMSAT6 Satellite Satellite 0 561 1 1 796 5098 2 0 4 chrUextra 27702854 27703416 -1301240 - R1_DM LINE R1 -1753 3603 3044 1 796 5184 0 4 2 chrUextra 27704178 27704740 -1299916 - SSU-rRNA_Dme rRNA rRNA -160 1835 1273 1 796 4936 6 0 0 chrUextra 27704840 27705370 -1299286 - R2_DM LINE R2 -2205 1402 873 1 796 379 43 0 0 chrUextra 27705355 27705401 -1299255 - R2B_DM LINE R2 -3441 87 42 1 796 1989 0 0 0 chrUextra 27706162 27706373 -1298283 + SSU-rRNA_Dme rRNA rRNA 1785 1995 0 1 796 21 89 0 0 chrUextra 27706392 27706448 -1298208 + AT_rich Low_complexity Low_complexity 1 56 0 1 796 560 169 15 7 chrUextra 27707559 27707696 -1296960 + PROTOP_B DNA P 311 448 -705 1 796 552 135 287 0 chrUextra 27707735 27707906 -1296750 - DNAREP1_DM LINE Penelope -199 395 176 1 796 26 0 0 0 chrUextra 27708008 27708034 -1296622 + AT_rich Low_complexity Low_complexity 1 26 0 1 796 3948 25 21 15 chrUextra 27708145 27708451 -1296205 - DM176_I LTR Gypsy -5581 839 528 1 796 181 30 29 57 chrUextra 27708451 27708486 -1296170 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1 796 3948 25 21 15 chrUextra 27708486 27708700 -1295956 - DM176_I LTR Gypsy -5893 527 316 1 796 4335 37 32 0 chrUextra 27708806 27709367 -1295289 + R1_DM LINE R1 449 1072 -4284 1 796 1611 34 0 5 chrUextra 27709474 27709921 -1294735 + (TTCTC)n Simple_repeat Simple_repeat 1 444 0 1 796 366 42 0 0 chrUextra 27709922 27709970 -1294686 + (TCTCG)n Simple_repeat Simple_repeat 3 50 0 1 796 186 125 62 0 chrUextra 27709980 27710028 -1294628 + GA-rich Low_complexity Low_complexity 3 53 0 1 796 423 0 0 0 chrUextra 27710128 27710175 -1294481 + (TTCTC)n Simple_repeat Simple_repeat 3 49 0 1 796 5135 7 0 0 chrUextra 27710789 27711350 -1293306 + R1_DM LINE R1 2967 3527 -1829 1 796 2570 85 7 38 chrUextra 27711450 27711999 -1292657 + DMSAT6 Satellite Satellite 1 532 -159 1 796 900 0 0 0 chrUextra 27712111 27712211 -1292445 + (TCTTG)n Simple_repeat Simple_repeat 1 100 0 1 796 1620 9 0 2 chrUextra 27712211 27712672 -1291984 + (CACAA)n Simple_repeat Simple_repeat 1 460 0 1 796 2611 86 13 47 chrUextra 27712772 27713312 -1291344 - DMSAT6 Satellite Satellite -412 521 1 1 796 621 0 0 0 chrUextra 27713924 27713993 -1290663 + (TTCTC)n Simple_repeat Simple_repeat 2 70 0 1 796 4805 14 29 0 chrUextra 27714093 27714653 -1290003 + MDG3_I LTR Gypsy 2358 2933 -2053 1 796 1165 170 182 22 chrUextra 27714753 27715120 -1289536 - Gypsy12_LTR LTR Gypsy -754 1582 1157 1 796 685 185 88 82 chrUextra 27715119 27715313 -1289343 + Gypsy12_LTR LTR Gypsy 281 475 -1861 1 796 2682 84 25 11 chrUextra 27715413 27715933 -1288723 + DMSAT6 Satellite Satellite 1 527 -74 1 796 5107 7 0 0 chrUextra 27716073 27716633 -1288023 - FW_DM LINE Jockey -3611 1081 522 1 796 2839 72 25 2 chrUextra 27716733 27717293 -1287363 + DMSAT6 Satellite Satellite 1 572 -141 1 796 945 68 6 20 chrUextra 27717394 27717934 -1286722 + RSP Satellite Satellite 1 532 0 1 796 4903 25 0 0 chrUextra 27718053 27718612 -1286044 - R1_DM LINE R1 -2538 2818 2260 1 796 2530 88 20 29 chrUextra 27718714 27719273 -1285383 + DMSAT6 Satellite Satellite 1 554 -59 1 796 2576 83 11 41 chrUextra 27719373 27719929 -1284727 + DMSAT6 Satellite Satellite 1 539 -61 1 796 2457 97 40 13 chrUextra 27720039 27720592 -1284064 - DMSAT6 Satellite Satellite 0 567 1 1 796 2508 189 12 7 chrUextra 27720693 27721253 -1283403 + SAR_DM Satellite Satellite 230 792 -680 1 796 3590 251 24 28 chrUextra 27721353 27722567 -1282089 + SAR_DM Satellite Satellite 1 1209 -227 1 796 248 35 0 0 chrUextra 27722543 27722572 -1282084 - ARS406_DM Unknown Unknown -164 189 161 1 796 2481 96 21 13 chrUextra 27722672 27723231 -1281425 + DMSAT6 Satellite Satellite 1 563 -108 1 796 931 9 9 0 chrUextra 27723331 27723438 -1281218 - R1_DM LINE R1 -5248 108 1 1 796 4078 9 0 2 chrUextra 27723438 27723890 -1280766 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2182 1 796 2492 170 26 5 chrUextra 27723990 27724549 -1280107 + SAR_DM Satellite Satellite 1 570 -1037 1 796 360 40 40 0 chrUextra 27724649 27724699 -1279957 + ARS406_DM Unknown Unknown 138 189 -164 1 796 2566 180 17 4 chrUextra 27724657 27725187 -1279469 - SAR_DM Satellite Satellite -615 857 321 1 796 5053 0 0 4 chrUextra 27725967 27726526 -1278130 - ROO_I LTR Pao -2691 5565 5009 1 796 1620 4 0 9 chrUextra 27726626 27727172 -1277484 + (TAGA)n Simple_repeat Simple_repeat 1 540 0 1 796 387 0 0 0 chrUextra 27727285 27727328 -1277328 + (CTAG)n Simple_repeat Simple_repeat 1 43 0 1 796 1571 0 19 0 chrUextra 27727328 27727544 -1277112 + (CTATG)n Simple_repeat Simple_repeat 1 219 0 1 796 1620 0 0 0 chrUextra 27727544 27727724 -1276932 + (CTAG)n Simple_repeat Simple_repeat 1 180 0 1 796 842 0 0 10 chrUextra 27727745 27727844 -1276812 + (CTAG)n Simple_repeat Simple_repeat 1 98 0 1 796 1620 43 0 8 chrUextra 27727951 27728446 -1276210 + (TTTA)n Simple_repeat Simple_repeat 1 491 0 1 796 315 0 0 0 chrUextra 27728448 27728483 -1276173 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 796 2595 186 5 11 chrUextra 27728603 27729162 -1275494 + SAR_DM Satellite Satellite 516 1071 -401 1 796 2699 83 32 27 chrUextra 27729262 27729821 -1274835 - DMSAT6 Satellite Satellite 0 562 1 1 796 5152 2 2 2 chrUextra 27729921 27730480 -1274176 - SSU-rRNA_Dme rRNA rRNA -708 1287 729 1 796 4950 14 0 5 chrUextra 27730581 27731137 -1273519 + DOC2_DM LINE Jockey 3566 4118 -675 1 796 4642 16 0 5 chrUextra 27731241 27731798 -1272858 + CIRCE LINE Composite 4224 4777 -1579 1 796 4041 29 107 0 chrUextra 27731898 27732457 -1272199 + R1_DM LINE R1 4382 5000 -356 1 796 2676 92 6 25 chrUextra 27732557 27733085 -1271571 + DMSAT6 Satellite Satellite 1 517 -82 1 796 2504 91 0 85 chrUextra 27733246 27733752 -1270904 - DMSAT6 Satellite Satellite -3 467 5 1 796 1158 123 0 0 chrUextra 27734533 27735008 -1269648 + (TA)n Simple_repeat Simple_repeat 1 475 0 1 796 735 0 0 0 chrUextra 27735010 27735091 -1269565 - DM176_LTR LTR Gypsy 0 507 427 1 796 3231 11 0 0 chrUextra 27735373 27735749 -1268907 + DM176_I LTR Gypsy 5440 5815 -605 1 796 198 0 0 169 chrUextra 27735850 27736057 -1268599 + (TCTTG)n Simple_repeat Simple_repeat 2 173 0 1 796 789 113 0 51 chrUextra 27736062 27736220 -1268436 + T-rich Low_complexity Low_complexity 6 155 0 1 796 1163 167 0 6 chrUextra 27736226 27736407 -1268249 + (TCTCTG)n Simple_repeat Simple_repeat 1 180 0 1 796 323 123 0 198 chrUextra 27736507 27736598 -1268058 + Stalker3_LTR LTR Gypsy 300 372 0 1 796 4109 28 0 0 chrUextra 27736598 27737065 -1267591 - R1_DM LINE R1 -963 4393 3927 1 796 2683 159 13 8 chrUextra 27737165 27737697 -1266959 + SAR_DM Satellite Satellite 389 923 -549 1 796 882 74 104 0 chrUextra 27737588 27737723 -1266933 - ARS406_DM Unknown Unknown -164 189 41 1 796 5009 9 0 0 chrUextra 27737823 27738381 -1266275 + DOC2_DM LINE Jockey 2780 3337 -1456 1 796 4901 21 4 2 chrUextra 27738481 27739039 -1265617 + MAX_I LTR Pao 3332 3890 -4024 1 796 5178 2 2 0 chrUextra 27739139 27739697 -1264959 - LSU-rRNA_Dme rRNA rRNA -1285 2615 2057 1 796 3929 9 0 0 chrUextra 27740455 27740884 -1263772 + R1_DM LINE R1 4928 5356 0 1 796 1208 8 0 0 chrUextra 27740882 27741013 -1263643 + LSU-rRNA_Dme rRNA rRNA 2640 2770 -1130 1 796 873 0 0 0 chrUextra 27741113 27741210 -1263446 + (TTGTG)n Simple_repeat Simple_repeat 4 100 0 1 796 2362 150 20 41 chrUextra 27741771 27742329 -1262327 + HETA LINE telomeric 22 567 -5514 1 796 1228 0 0 7 chrUextra 27742446 27742582 -1262074 + 5S_DM RNA RNA 1 135 0 1 796 1258 0 0 0 chrUextra 27742813 27742948 -1261708 + 5S_DM RNA RNA 1 135 0 1 796 2483 97 13 56 chrUextra 27743753 27744303 -1260353 + DMSAT6 Satellite Satellite 1 526 0 1 796 2563 179 11 9 chrUextra 27744406 27744959 -1259697 - SAR_DM Satellite Satellite -396 1076 523 1 796 252 172 0 0 chrUextra 27745720 27745778 -1258878 + (CTATT)n Simple_repeat Simple_repeat 2 59 0 1 796 4874 12 0 0 chrUextra 27746377 27746935 -1257721 + DMRT1A LINE R1 494 1051 -4132 1 796 5055 4 2 4 chrUextra 27747035 27747593 -1257063 - LSU-rRNA_Dme rRNA rRNA -2287 1613 1057 1 796 1332 18 0 6 chrUextra 27747718 27747883 -1256773 + NTS_DM Other Other 38 201 -39 1 796 928 9 0 27 chrUextra 27747935 27748047 -1256609 + NTS_DM Other Other 25 133 -107 1 796 1302 18 0 12 chrUextra 27748047 27748213 -1256443 + NTS_DM Other Other 38 201 -39 1 796 21 57 0 0 chrUextra 27748213 27748248 -1256408 + AT_rich Low_complexity Low_complexity 1 35 0 1 796 2809 165 7 7 chrUextra 27748355 27748905 -1255751 + SAR_DM Satellite Satellite 346 895 -577 1 796 5067 7 0 4 chrUextra 27749008 27749565 -1255091 - SSU-rRNA_Dme rRNA rRNA -339 1656 1102 1 796 2677 32 0 3 chrUextra 27749665 27749976 -1254680 + G2_DM LINE Jockey 1148 1457 -1645 1 796 2047 40 0 0 chrUextra 27749974 27750222 -1254434 - G2_DM LINE Jockey -75 3027 2780 1 796 1185 50 0 17 chrUextra 27750322 27750503 -1254153 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 1 796 1242 69 0 3 chrUextra 27750528 27750877 -1253779 + (TCTA)n Simple_repeat Simple_repeat 1 347 0 1 796 401 56 19 0 chrUextra 27751051 27751105 -1253551 - DNAREP1_DM LINE Penelope -532 62 8 1 796 599 149 15 7 chrUextra 27751177 27751312 -1253344 + PROTOP_B DNA P 313 448 -705 1 796 350 87 0 0 chrUextra 27751351 27751397 -1253259 - DNAREP1_DM LINE Penelope -199 395 350 1 796 1620 42 0 13 chrUextra 27751647 27752174 -1252482 + (TAA)n Simple_repeat Simple_repeat 1 519 0 1 796 3867 13 2 54 chrUextra 27752293 27752775 -1251881 - LSU-rRNA_Dme rRNA rRNA -3443 457 1 1 796 254 300 15 15 chrUextra 27753017 27753149 -1251507 + (TATATG)n Simple_repeat Simple_repeat 2 133 0 1 796 22 0 0 0 chrUextra 27753175 27753197 -1251459 + AT_rich Low_complexity Low_complexity 1 22 0 1 796 416 266 22 102 chrUextra 27753276 27753502 -1251154 - TIRANT_I LTR Gypsy -6337 1355 1148 1 796 28 86 0 0 chrUextra 27753607 27753677 -1250979 + AT_rich Low_complexity Low_complexity 1 70 0 1 796 351 89 20 51 chrUextra 27753679 27753781 -1250875 + MDG1_I LTR Gypsy 6545 6596 0 1 796 1533 20 0 0 chrUextra 27753785 27754131 -1250525 + (TAA)n Simple_repeat Simple_repeat 1 346 0 1 796 2700 169 13 13 chrUextra 27754264 27754821 -1249835 - SAR_DM Satellite Satellite -454 1018 462 1 796 5174 2 0 0 chrUextra 27754921 27755478 -1249178 + R1_DM LINE R1 1946 2502 -2854 1 796 2654 79 12 45 chrUextra 27755578 27756135 -1248521 + DMSAT6 Satellite Satellite 1 538 -40 1 796 4827 6 2 0 chrUextra 27756268 27756792 -1247864 - LSU-rRNA_Dme rRNA rRNA -2 3898 3374 1 796 353 333 0 16 chrUextra 27756892 27757075 -1247581 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 796 458 261 0 24 chrUextra 27757019 27757365 -1247291 + (CAAA)n Simple_repeat Simple_repeat 1 337 0 1 796 2471 181 16 14 chrUextra 27757549 27758105 -1246551 + SAR_DM Satellite Satellite 446 1002 -470 1 796 5164 4 0 0 chrUextra 27758861 27759417 -1245239 - LSU-rRNA_Dme rRNA rRNA -684 3216 2661 1 796 945 0 0 0 chrUextra 27759517 27759622 -1245034 + (GAGAA)n Simple_repeat Simple_repeat 4 108 0 1 796 34 24 0 0 chrUextra 27760249 27760290 -1244366 + AT_rich Low_complexity Low_complexity 1 41 0 1 796 598 220 364 26 chrUextra 27760299 27760645 -1244011 - TAHRE LINE telomeric -187 10276 9814 1 796 530 165 11 0 chrUextra 27760638 27760729 -1243927 - TART LINE telomeric -4520 9957 9866 1 796 4976 2 0 2 chrUextra 27760829 27761368 -1243288 + R1_DM LINE R1 4819 5356 0 1 796 4587 22 5 2 chrUextra 27761485 27762041 -1242615 - TRANSPAC_I LTR Gypsy -324 4266 3709 1 796 202 265 0 0 chrUextra 27762159 27762208 -1242448 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 796 1856 40 4 101 chrUextra 27762797 27763073 -1241583 - MAX_I LTR Pao -7665 249 1 1 796 1609 131 77 0 chrUextra 27763073 27763347 -1241309 - MAX_LTR LTR Pao 0 321 27 1 796 232 0 0 0 chrUextra 27763453 27763478 -1241178 - NTS_DM Other Other -178 62 38 1 796 928 9 0 27 chrUextra 27763478 27763590 -1241066 - NTS_DM Other Other -107 133 25 1 796 1332 18 0 6 chrUextra 27763642 27763807 -1240849 - NTS_DM Other Other -39 201 38 1 796 928 9 0 27 chrUextra 27763807 27763919 -1240737 - NTS_DM Other Other -107 133 25 1 796 319 0 0 0 chrUextra 27763971 27764008 -1240648 - NTS_DM Other Other -39 201 165 1 796 1124 269 41 47 chrUextra 27764109 27764640 -1240016 - SAR_DM Satellite Satellite -751 721 194 1 796 332 267 54 20 chrUextra 27764507 27764656 -1240000 + XDMR_DM Unknown Unknown 6 159 -201 1 796 2653 161 24 22 chrUextra 27765422 27765974 -1238682 - SAR_DM Satellite Satellite -587 885 333 1 796 4994 2 5 4 chrUextra 27766077 27766633 -1238023 - LSU-rRNA_Dme rRNA rRNA -2216 1684 1128 1 796 4285 56 0 25 chrUextra 27766735 27767289 -1237367 + R1_DM LINE R1 118 657 -4699 1 796 2620 91 19 40 chrUextra 27767389 27767921 -1236735 + DMSAT6 Satellite Satellite 1 520 -147 1 796 2459 179 15 8 chrUextra 27768051 27768584 -1236072 + SAR_DM Satellite Satellite 540 1076 -396 1 796 3380 3 5 3 chrUextra 27770013 27770391 -1234265 + LSU-rRNA_Dme rRNA rRNA 1413 1791 -2109 1 796 1247 0 0 7 chrUextra 27770432 27770569 -1234087 + LSU-rRNA_Dme rRNA rRNA 1788 1923 -1977 1 796 5055 4 2 4 chrUextra 27770669 27771225 -1233431 + LSU-rRNA_Dme rRNA rRNA 1002 1556 -2344 1 796 5032 2 2 5 chrUextra 27771325 27771881 -1232775 + LSU-rRNA_Dme rRNA rRNA 870 1423 -2477 1 796 2601 174 13 16 chrUextra 27772637 27773192 -1231464 + SAR_DM Satellite Satellite 299 851 -621 1 796 2548 174 13 14 chrUextra 27773292 27773847 -1230809 - SAR_DM Satellite Satellite -518 954 401 1 796 2694 81 11 54 chrUextra 27773981 27774502 -1230154 + DMSAT6 Satellite Satellite 1 499 0 1 796 26 30 0 0 chrUextra 27775070 27775103 -1229553 + AT_rich Low_complexity Low_complexity 1 33 0 1 796 2746 170 18 23 chrUextra 27775912 27777122 -1227534 - DMSAT6 Satellite Satellite -68 1203 1 1 796 2477 172 37 11 chrUextra 27777877 27778423 -1226233 - SAR_DM Satellite Satellite -587 885 326 1 796 1309 50 0 0 chrUextra 27778532 27778691 -1225965 + DM1731_LTR LTR Copia 178 336 0 1 796 1620 8 5 0 chrUextra 27778691 27779087 -1225569 + (TTATA)n Simple_repeat Simple_repeat 1 398 0 1 796 2576 104 11 7 chrUextra 27779187 27779742 -1224914 + DMSAT6 Satellite Satellite 1 556 -97 1 796 5077 4 0 0 chrUextra 27779842 27780397 -1224259 - R1_DM LINE R1 -2098 3258 2704 1 796 2750 169 7 7 chrUextra 27780497 27781050 -1223606 - SAR_DM Satellite Satellite -627 845 293 1 796 1991 91 66 29 chrUextra 27781152 27781674 -1222982 - TAHRE LINE telomeric -12 10451 10186 1 796 2559 91 22 7 chrUextra 27781807 27782352 -1222304 - DMSAT6 Satellite Satellite -73 552 1 1 796 853 11 0 0 chrUextra 27782462 27782555 -1222101 - FW_DM LINE Jockey -1992 2700 2608 1 796 4038 13 0 13 chrUextra 27782551 27783017 -1221639 - FW_DM LINE Jockey -2206 2486 2027 1 796 429 49 0 16 chrUextra 27783117 27783179 -1221477 + NTS_DM Other Other 141 201 -39 1 796 928 9 0 27 chrUextra 27783231 27783343 -1221313 + NTS_DM Other Other 25 133 -107 1 796 1340 18 0 6 chrUextra 27783343 27783508 -1221148 + NTS_DM Other Other 38 201 -39 1 796 901 18 0 27 chrUextra 27783560 27783672 -1220984 + NTS_DM Other Other 25 133 -107 1 796 2492 186 25 33 chrUextra 27783772 27784959 -1219697 + DMSAT6 Satellite Satellite 1 1177 0 1 796 2356 109 20 38 chrUextra 27785082 27785637 -1219019 - DMSAT6 Satellite Satellite -107 544 1 1 796 2239 180 47 7 chrUextra 27785737 27786292 -1218364 + SAR_DM Satellite Satellite 1 577 -677 1 99 3971 66 45 18 chrUextra 27787047 27787602 -1217054 + R1_DM LINE R1 292 861 -4495 1 797 5094 2 0 0 chrUextra 27789012 27789566 -1215090 + R1_DM LINE R1 1416 1969 -3387 1 797 2404 77 26 41 chrUextra 27789684 27790220 -1214436 - DMSAT6 Satellite Satellite -1 527 1 1 797 460 0 0 140 chrUextra 27790321 27790714 -1213942 + (CAGAGA)n Simple_repeat Simple_repeat 1 337 0 1 797 442 141 54 8 chrUextra 27790744 27790873 -1213783 + GA-rich Low_complexity Low_complexity 5 139 0 1 797 2639 169 11 8 chrUextra 27790993 27791528 -1213128 - SAR_DM Satellite Satellite -396 1076 540 1 797 2694 268 11 50 chrUextra 27791631 27792806 -1211850 + SAR_DM Satellite Satellite 1 1128 -680 1 797 323 223 9 26 chrUextra 27792720 27792835 -1211821 - XDMR_DM Unknown Unknown 0 360 248 1 797 5092 2 2 2 chrUextra 27792936 27793490 -1211166 - LSU-rRNA_Dme rRNA rRNA -883 3017 2464 1 797 2362 95 5 52 chrUextra 27793590 27794144 -1210512 - DMSAT6 Satellite Satellite -6 528 1 1 797 2464 93 16 49 chrUextra 27794244 27794798 -1209858 - DMSAT6 Satellite Satellite -32 535 1 1 797 2332 110 146 7 chrUextra 27794982 27795394 -1209262 + Invader1_I LTR Gypsy 2718 3186 0 1 797 225 70 0 189 chrUextra 27795399 27795452 -1209204 + Invader1_LTR LTR Gypsy 4 46 -377 1 797 2562 90 9 70 chrUextra 27795552 27796105 -1208551 + DMSAT6 Satellite Satellite 1 519 -3 1 797 258 194 0 0 chrUextra 27796688 27796755 -1207901 + (TTATG)n Simple_repeat Simple_repeat 2 68 0 1 797 2594 96 21 32 chrUextra 27796876 27797414 -1207242 - DMSAT6 Satellite Satellite -3 532 1 1 797 4534 26 0 11 chrUextra 27797514 27798068 -1206588 - NOMAD_I LTR Gypsy -448 6124 5577 1 797 5136 4 0 0 chrUextra 27798168 27798722 -1205934 - LSU-rRNA_Dme rRNA rRNA -1530 2370 1817 1 797 1249 42 0 18 chrUextra 27798824 27798992 -1205664 - NTS_DM Other Other -75 165 1 1 797 1714 34 16 33 chrUextra 27798992 27799236 -1205420 - NTS_DM Other Other 0 240 1 1 797 987 22 29 21 chrUextra 27799236 27799376 -1205280 - NTS_DM Other Other 0 240 100 1 797 2588 180 9 11 chrUextra 27799476 27800026 -1204630 + SAR_DM Satellite Satellite 498 1046 -426 1 797 2586 91 18 22 chrUextra 27800130 27800683 -1203973 + DMSAT6 Satellite Satellite 1 551 0 1 797 357 41 0 20 chrUextra 27801438 27801488 -1203168 - ARS406_DM Unknown Unknown -215 138 90 1 797 1896 179 24 12 chrUextra 27801485 27801908 -1202748 + SAR_DM Satellite Satellite 487 914 -558 1 797 633 70 0 0 chrUextra 27801905 27801991 -1202665 - ARS406_DM Unknown Unknown -195 158 73 1 797 5114 2 2 0 chrUextra 27802746 27803299 -1201357 - LSU-rRNA_Dme rRNA rRNA -1267 2633 2080 1 797 3572 12 45 0 chrUextra 27803399 27803821 -1200835 - IDEFIX_LTR LTR Gypsy -153 441 1 1 797 257 105 0 0 chrUextra 27803789 27803827 -1200829 + BARI1 DNA Tc1 3 40 -1710 1 797 2783 157 15 7 chrUextra 27804058 27804602 -1200054 + SAR_DM Satellite Satellite 332 879 -593 1 797 4654 24 2 2 chrUextra 27804705 27805258 -1199398 + PROTOP_A DNA P 504 1056 -49 1 797 248 130 58 0 chrUextra 27805366 27805435 -1199221 + CT-rich Low_complexity Low_complexity 2 74 0 1 797 1357 41 0 11 chrUextra 27806014 27806488 -1198168 + (TTATA)n Simple_repeat Simple_repeat 1 468 0 1 797 672 13 0 0 chrUextra 27806488 27806564 -1198092 + (TTCTC)n Simple_repeat Simple_repeat 1 77 0 1 797 21 89 0 0 chrUextra 27807079 27807135 -1197521 + AT_rich Low_complexity Low_complexity 1 56 0 1 797 576 0 0 0 chrUextra 27807154 27807217 -1197439 - SSU-rRNA_Dme rRNA rRNA 0 1995 1933 1 797 30 103 0 0 chrUextra 27807318 27807425 -1197231 + AT_rich Low_complexity Low_complexity 1 107 0 1 797 1620 33 0 2 chrUextra 27807970 27808519 -1196137 + (TTATA)n Simple_repeat Simple_repeat 1 548 0 1 797 757 0 0 0 chrUextra 27808623 27808709 -1195947 + ROO_LTR LTR Pao 343 428 0 1 797 1620 11 0 0 chrUextra 27809292 27809829 -1194827 + (GAGAA)n Simple_repeat Simple_repeat 1 537 0 1 797 227 195 0 0 chrUextra 27809951 27809992 -1194664 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2580 1 797 4183 25 2 2 chrUextra 27810004 27810482 -1194174 - LSU-rRNA_Dme rRNA rRNA 0 3900 3423 1 797 684 0 0 0 chrUextra 27810582 27810658 -1193998 + (CAAGA)n Simple_repeat Simple_repeat 1 76 0 1 797 34 24 0 0 chrUextra 27811636 27811677 -1192979 + AT_rich Low_complexity Low_complexity 1 41 0 1 797 5069 7 0 0 chrUextra 27811888 27812441 -1192215 - LSU-rRNA_Dme rRNA rRNA -615 3285 2733 1 797 1016 86 6 0 chrUextra 27812541 27812703 -1191953 + (AATAG)n Simple_repeat Simple_repeat 2 164 0 1 797 1188 98 3 27 chrUextra 27812731 27813094 -1191562 + (AATAG)n Simple_repeat Simple_repeat 1 354 0 1 797 5109 0 0 4 chrUextra 27813194 27813746 -1190910 - LSU-rRNA_Dme rRNA rRNA -488 3412 2863 1 797 2186 209 15 7 chrUextra 27813851 27814400 -1190256 - SAR_DM Satellite Satellite -677 795 243 1 797 2431 123 21 6 chrUextra 27814500 27815037 -1189619 + DMSAT6 Satellite Satellite 1 545 -78 1 797 4926 4 11 2 chrUextra 27815806 27816358 -1188298 - IVK_DM LINE I -2282 3120 2564 1 797 282 0 30 0 chrUextra 27816458 27816491 -1188165 - NTS_DM Other Other -169 71 38 1 797 890 9 9 27 chrUextra 27816491 27816602 -1188054 - NTS_DM Other Other -107 133 25 1 797 21 57 0 0 chrUextra 27816628 27816663 -1187993 + AT_rich Low_complexity Low_complexity 1 35 0 1 797 1306 24 0 6 chrUextra 27816663 27816828 -1187828 - NTS_DM Other Other -39 201 38 1 797 928 9 0 27 chrUextra 27816828 27816940 -1187716 - NTS_DM Other Other -107 133 25 1 797 21 36 0 0 chrUextra 27816966 27816994 -1187662 + AT_rich Low_complexity Low_complexity 1 28 0 1 797 213 236 59 26 chrUextra 27817125 27817277 -1187379 + (TTTAG)n Simple_repeat Simple_repeat 3 159 0 1 797 219 259 33 26 chrUextra 27817485 27817636 -1187020 + (TTTAG)n Simple_repeat Simple_repeat 3 154 0 1 797 4946 20 0 0 chrUextra 27817762 27818314 -1186342 + R1_DM LINE R1 4291 4842 -514 1 797 2049 184 11 18 chrUextra 27818418 27818963 -1185693 - SAR_DM Satellite Satellite -852 541 1 1 797 1488 65 0 10 chrUextra 27819067 27819584 -1185072 + (CAAGA)n Simple_repeat Simple_repeat 1 512 0 1 797 2662 167 11 6 chrUextra 27819721 27820250 -1184406 - SAR_DM Satellite Satellite -615 857 326 1 797 2289 199 8 6 chrUextra 27820370 27820885 -1183771 - SAR_DM Satellite Satellite -711 761 246 1 797 392 151 0 0 chrUextra 27820846 27820919 -1183737 + ARS406_DM Unknown Unknown 2 74 -279 1 797 1159 20 119 20 chrUextra 27823379 27823530 -1181126 + PROTOP_B DNA P 1 166 -987 1 797 2252 128 7 77 chrUextra 27823637 27824182 -1180474 - DMSAT6 Satellite Satellite -3 507 1 1 797 2417 89 11 54 chrUextra 27824282 27824834 -1179822 + DMSAT6 Satellite Satellite 1 527 0 1 797 2780 91 9 17 chrUextra 27824951 27825479 -1179177 + DMSAT6 Satellite Satellite 1 523 0 1 797 459 0 0 0 chrUextra 27825586 27825637 -1179019 + (TTCTC)n Simple_repeat Simple_repeat 1 51 0 1 797 1620 12 0 0 chrUextra 27825640 27826135 -1178521 + (GAGAA)n Simple_repeat Simple_repeat 1 495 0 1 797 1431 0 0 0 chrUextra 27826238 27826397 -1178259 + (GAGAA)n Simple_repeat Simple_repeat 4 162 0 1 797 4433 4 6 8 chrUextra 27827542 27828050 -1176606 + LSU-rRNA_Dme rRNA rRNA 1285 1791 -2109 1 797 2859 157 17 4 chrUextra 27828194 27828737 -1175919 + SAR_DM Satellite Satellite 342 891 -581 1 797 723 12 0 0 chrUextra 27828663 27828746 -1175910 - ARS406_DM Unknown Unknown -166 187 105 1 797 2201 164 17 15 chrUextra 27828846 27829273 -1175383 - SAR_DM Satellite Satellite -662 552 48 1 797 673 35 0 23 chrUextra 27829273 27829360 -1175296 + ARS406_DM Unknown Unknown 105 189 -164 1 797 2201 164 17 15 chrUextra 27829360 27829398 -1175258 - SAR_DM Satellite Satellite -662 47 1 1 797 1462 6 0 27 chrUextra 27829501 27829686 -1174970 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 797 1533 36 0 0 chrUextra 27829698 27829979 -1174677 + (TAGA)n Simple_repeat Simple_repeat 1 281 0 1 797 249 57 0 0 chrUextra 27830004 27830039 -1174617 + (CATA)n Simple_repeat Simple_repeat 1 35 0 1 797 946 43 0 8 chrUextra 27830151 27830268 -1174388 - R1_DM LINE R1 -2970 2386 2271 1 797 441 20 0 0 chrUextra 27830261 27830311 -1174345 + CIRCE LINE Composite 4931 4980 -1376 1 797 239 27 0 51 chrUextra 27830663 27830702 -1173954 + CIRCE LINE Composite 4981 5017 -1339 1 797 480 18 0 50 chrUextra 27830802 27830862 -1173794 - NTS_DM Other Other -159 81 25 1 797 21 57 0 0 chrUextra 27830888 27830923 -1173733 + AT_rich Low_complexity Low_complexity 1 35 0 1 797 1332 18 0 6 chrUextra 27830923 27831088 -1173568 - NTS_DM Other Other -39 201 38 1 797 928 9 0 27 chrUextra 27831088 27831200 -1173456 - NTS_DM Other Other -107 133 25 1 797 691 30 0 10 chrUextra 27831253 27831354 -1173302 - NTS_DM Other Other -39 201 102 1 797 4904 2 0 0 chrUextra 27831454 27832005 -1172651 - LSU-rRNA_Dme rRNA rRNA -2978 922 372 1 797 5031 2 2 4 chrUextra 27832105 27832656 -1172000 - SSU-rRNA_Dme rRNA rRNA -674 1321 772 1 797 5039 4 0 2 chrUextra 27833407 27833958 -1170698 + R1_DM LINE R1 1888 2437 -2919 1 797 452 218 157 28 chrUextra 27834058 27834275 -1170381 - Gypsy12A_LTR LTR Gypsy -1036 1244 1000 1 797 2848 0 0 0 chrUextra 27834709 27835029 -1169627 - HMSBEAGLE_I LTR Gypsy -5234 1295 976 1 797 764 38 45 15 chrUextra 27835029 27835163 -1169493 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 797 526 33 0 72 chrUextra 27835163 27835260 -1169396 - HMSBEAGLE_I LTR Gypsy -5733 796 707 1 797 5086 0 0 4 chrUextra 27835360 27835911 -1168745 - LSU-rRNA_Dme rRNA rRNA -526 3374 2826 1 797 3793 82 58 4 chrUextra 27836011 27836562 -1168094 - TRANSIB2 DNA Transib -1777 1067 487 1 797 4966 2 0 2 chrUextra 27836662 27837213 -1167443 - LSU-rRNA_Dme rRNA rRNA -2808 1092 543 1 797 1620 0 0 0 chrUextra 27837647 27837859 -1166797 + (CACAA)n Simple_repeat Simple_repeat 1 212 0 1 797 2684 84 7 24 chrUextra 27837964 27838515 -1166141 - DMSAT6 Satellite Satellite -106 541 1 1 797 1214 23 23 23 chrUextra 27838615 27838790 -1165866 + NTS_DM Other Other 66 240 0 1 797 1880 17 17 17 chrUextra 27838790 27839030 -1165626 + NTS_DM Other Other 1 240 0 1 797 1226 7 0 0 chrUextra 27839030 27839166 -1165490 + NTS_DM Other Other 1 136 -104 1 797 293 111 0 0 chrUextra 27839275 27839320 -1165336 + TART LINE telomeric 3318 3362 -11115 1 797 2206 126 17 26 chrUextra 27839315 27839665 -1164991 + TART LINE telomeric 3683 4029 -10448 1 797 949 136 0 7 chrUextra 27839669 27839817 -1164839 + TART LINE telomeric 6842 6988 -7489 1 797 2709 81 25 8 chrUextra 27839918 27840441 -1164215 - DMSAT6 Satellite Satellite -84 532 1 1 797 2568 111 21 9 chrUextra 27841240 27841770 -1162886 + DMSAT6 Satellite Satellite 1 536 -3 1 797 4517 35 18 4 chrUextra 27841870 27842421 -1162235 - R1_DM LINE R1 -4172 1184 626 1 797 2320 190 16 24 chrUextra 27842521 27843071 -1161585 + SAR_DM Satellite Satellite 555 1100 -372 1 797 489 47 0 0 chrUextra 27843171 27843235 -1161421 + (TTCTC)n Simple_repeat Simple_repeat 3 66 0 1 797 909 27 0 0 chrUextra 27843235 27843347 -1161309 + (GAGAA)n Simple_repeat Simple_repeat 2 113 0 1 797 4931 2 2 7 chrUextra 27843821 27844371 -1160285 + LSU-rRNA_Dme rRNA rRNA 1046 1592 -2308 1 797 2939 37 11 120 chrUextra 27844471 27845021 -1159635 + BATUMI_I LTR Pao 545 1034 -6929 1 797 2696 87 18 16 chrUextra 27845771 27846321 -1158335 - DMSAT6 Satellite Satellite 0 550 1 1 797 2827 159 11 7 chrUextra 27846426 27846971 -1157685 + SAR_DM Satellite Satellite 371 917 -555 1 797 2498 92 24 29 chrUextra 27847071 27847621 -1157035 - DMSAT6 Satellite Satellite 0 547 1 1 797 5085 0 2 2 chrUextra 27847721 27848271 -1156385 + SSU-rRNA_Dme rRNA rRNA 1198 1747 -248 1 797 2533 182 11 11 chrUextra 27848371 27848921 -1155735 + SAR_DM Satellite Satellite 498 1047 -425 1 797 2584 94 20 13 chrUextra 27849021 27849570 -1155086 - DMSAT6 Satellite Satellite -3 553 1 1 797 2529 112 7 25 chrUextra 27849673 27850221 -1154435 - DMSAT6 Satellite Satellite -5 538 1 1 797 1620 3 0 0 chrUextra 27850584 27850871 -1153785 + (TTCTC)n Simple_repeat Simple_repeat 1 287 0 1 797 2281 49 169 5 chrUextra 27850971 27851515 -1153141 - R1_DM LINE R1 -4110 1246 614 1 797 4046 86 6 2 chrUextra 27851620 27852169 -1152487 + S_DM DNA Tc1 688 1238 -498 1 797 1041 97 0 6 chrUextra 27852276 27852814 -1151842 + (CAAGA)n Simple_repeat Simple_repeat 1 534 0 1 797 2558 186 7 7 chrUextra 27853568 27854114 -1150542 + SAR_DM Satellite Satellite 469 1014 -458 1 797 236 247 60 36 chrUextra 27854232 27854316 -1150340 + OSVALDO_LTR LTR Gypsy 12 97 -1099 1 797 510 221 0 17 chrUextra 27854317 27854492 -1150164 + (TATG)n Simple_repeat Simple_repeat 3 174 0 1 797 717 217 0 0 chrUextra 27854556 27854736 -1149920 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 797 5107 0 2 2 chrUextra 27854865 27855414 -1149242 + LSU-rRNA_Dme rRNA rRNA 2988 3536 -364 1 797 2635 96 26 22 chrUextra 27855527 27856063 -1148593 - DMSAT6 Satellite Satellite 0 537 1 1 797 5085 0 4 0 chrUextra 27856163 27856710 -1147946 + SSU-rRNA_Dme rRNA rRNA 1447 1995 0 1 797 957 0 0 0 chrUextra 27856812 27856915 -1147741 - NTS_DM Other Other -137 103 1 1 797 1933 13 17 13 chrUextra 27856915 27857154 -1147502 - NTS_DM Other Other 0 240 1 1 797 1388 64 19 14 chrUextra 27857154 27857361 -1147295 - NTS_DM Other Other 0 240 33 1 797 2652 82 6 83 chrUextra 27857488 27857993 -1146663 + DMSAT6 Satellite Satellite 5 470 0 1 797 2738 91 19 15 chrUextra 27858128 27858659 -1145997 + DMSAT6 Satellite Satellite 1 532 0 1 797 1515 43 0 4 chrUextra 27858761 27859297 -1145359 + (ATAAG)n Simple_repeat Simple_repeat 1 534 0 1 797 5079 4 0 0 chrUextra 27859408 27859957 -1144699 + LSU-rRNA_Dme rRNA rRNA 1980 2528 -1372 1 797 444 19 0 0 chrUextra 27860553 27860606 -1144050 + (GAGAA)n Simple_repeat Simple_repeat 5 57 0 1 797 504 0 0 0 chrUextra 27860710 27860766 -1143890 + (TTCTC)n Simple_repeat Simple_repeat 5 60 0 1 797 2693 73 17 36 chrUextra 27861377 27861904 -1142752 - DMSAT6 Satellite Satellite 0 517 1 1 797 385 36 0 141 chrUextra 27862013 27862433 -1142223 + (TCTCTG)n Simple_repeat Simple_repeat 1 360 0 1 797 201 73 22 109 chrUextra 27862459 27862551 -1142105 + (TCTCTG)n Simple_repeat Simple_repeat 6 89 0 1 797 2423 184 16 9 chrUextra 27863302 27863851 -1140805 - SAR_DM Satellite Satellite -674 798 246 1 797 1158 131 0 0 chrUextra 27863951 27864483 -1140173 + (TA)n Simple_repeat Simple_repeat 1 532 0 1 797 4813 2 7 7 chrUextra 27864600 27865149 -1139507 + LSU-rRNA_Dme rRNA rRNA 1234 1782 -2118 1 797 2819 165 9 6 chrUextra 27865249 27865798 -1138858 - SAR_DM Satellite Satellite -550 922 372 1 797 3770 83 46 31 chrUextra 27865898 27866446 -1138210 - Gypsy12_I LTR Gypsy -3960 1586 1031 1 797 2378 126 11 19 chrUextra 27866546 27867072 -1137584 - DMSAT6 Satellite Satellite -50 522 1 1 797 313 287 8 54 chrUextra 27867238 27867367 -1137289 - Gypsy12_LTR LTR Gypsy -1535 801 679 1 797 950 222 54 73 chrUextra 27867427 27867742 -1136914 - Gypsy12_LTR LTR Gypsy -1777 559 251 1 797 2807 158 15 9 chrUextra 27867842 27868390 -1136266 - SAR_DM Satellite Satellite -536 936 386 1 797 2580 85 21 25 chrUextra 27868519 27869038 -1135618 - DMSAT6 Satellite Satellite -7 517 1 1 797 4202 35 2 0 chrUextra 27869138 27869681 -1134975 + NOMAD_I LTR Gypsy 5270 5813 -759 1 797 5025 4 2 2 chrUextra 27870434 27870982 -1133674 + SSU-rRNA_Dme rRNA rRNA 1317 1864 -131 1 797 2643 170 6 8 chrUextra 27871082 27871609 -1133047 - SAR_DM Satellite Satellite -621 851 326 1 797 1620 0 0 0 chrUextra 27872381 27872796 -1131860 + (TTGTG)n Simple_repeat Simple_repeat 1 415 0 1 797 1104 8 0 0 chrUextra 27872796 27872918 -1131738 + DMRT1B LINE R1 3536 3657 -1526 1 797 510 169 51 0 chrUextra 27873062 27873383 -1131273 + GA-rich Low_complexity Low_complexity 1 337 0 1 797 554 155 41 18 chrUextra 27873402 27873573 -1131083 + GA-rich Low_complexity Low_complexity 5 179 0 1 797 2638 93 16 21 chrUextra 27873707 27874222 -1130434 - DMSAT6 Satellite Satellite 0 511 1 1 797 2691 186 15 24 chrUextra 27874322 27875513 -1129143 - DMSAT6 Satellite Satellite -23 1180 1 1 797 2586 188 6 6 chrUextra 27875620 27876161 -1128495 - SAR_DM Satellite Satellite -396 1076 536 1 797 922 51 0 0 chrUextra 27876265 27876382 -1128274 + ARS406_DM Unknown Unknown 73 189 -164 1 797 1896 179 88 30 chrUextra 27876279 27876810 -1127846 - SAR_DM Satellite Satellite -203 1269 708 1 797 4789 7 0 2 chrUextra 27876910 27877457 -1127199 + LSU-rRNA_Dme rRNA rRNA 370 915 -2985 1 797 1827 0 0 0 chrUextra 27877557 27877755 -1126901 - LSU-rRNA_Dme rRNA rRNA -3702 198 1 1 797 21 95 0 0 chrUextra 27877767 27877830 -1126826 + AT_rich Low_complexity Low_complexity 1 63 0 1 797 35 24 0 0 chrUextra 27878043 27878085 -1126571 + AT_rich Low_complexity Low_complexity 1 42 0 1 797 2495 115 6 26 chrUextra 27878204 27878742 -1125914 + DMSAT6 Satellite Satellite 1 526 -64 1 797 1107 7 0 7 chrUextra 27878851 27878990 -1125666 + STALKER4_I LTR Gypsy 6393 6530 0 1 797 755 0 0 0 chrUextra 27878990 27879072 -1125584 + STALKER4_LTR LTR Gypsy 1 82 -320 1 797 1798 38 0 5 chrUextra 27879072 27879286 -1125370 + STALKER4_LTR LTR Gypsy 189 401 -1 1 797 2543 177 11 9 chrUextra 27879498 27880045 -1124611 - SAR_DM Satellite Satellite -621 851 304 1 797 370 6 0 163 chrUextra 27880439 27880654 -1124002 + (CATAG)n Simple_repeat Simple_repeat 1 180 0 1 797 1500 33 3 9 chrUextra 27881007 27881339 -1123317 + (TCTTG)n Simple_repeat Simple_repeat 1 330 0 1 797 681 0 93 0 chrUextra 27881439 27881568 -1123088 + (CATAG)n Simple_repeat Simple_repeat 5 145 0 1 797 1455 63 0 16 chrUextra 27881568 27881986 -1122670 + (TAGA)n Simple_repeat Simple_repeat 1 411 0 1 797 2335 129 4 45 chrUextra 27882121 27882607 -1122049 - DMSAT6 Satellite Satellite 0 470 5 1 797 462 18 0 0 chrUextra 27883222 27883277 -1121379 + (GAGAA)n Simple_repeat Simple_repeat 2 56 0 1 797 765 31 0 0 chrUextra 27883454 27883550 -1121106 + (TATTG)n Simple_repeat Simple_repeat 1 96 0 1 797 1294 45 6 6 chrUextra 27883552 27883731 -1120925 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 1 797 1072 101 6 6 chrUextra 27883746 27883925 -1120731 + (TATTG)n Simple_repeat Simple_repeat 2 180 0 1 797 754 83 50 8 chrUextra 27884027 27884148 -1120508 - SAR_DM Satellite Satellite -976 496 371 1 797 1879 179 12 10 chrUextra 27884168 27884574 -1120082 + SAR_DM Satellite Satellite 399 805 -667 1 797 2024 9 0 9 chrUextra 27884674 27884904 -1119752 + MAX_LTR LTR Pao 93 320 -1 1 797 1620 19 0 0 chrUextra 27884904 27885211 -1119445 + (TTATA)n Simple_repeat Simple_repeat 1 307 0 1 797 2750 167 11 6 chrUextra 27885321 27885868 -1118788 - SAR_DM Satellite Satellite -539 933 384 1 797 277 176 0 19 chrUextra 27886011 27886063 -1118593 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 233 154 258 15 chrUextra 27886081 27886147 -1118509 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2570 1 797 236 196 0 38 chrUextra 27886187 27886240 -1118416 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 266 196 0 19 chrUextra 27886280 27886332 -1118324 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 768 0 0 0 chrUextra 27886433 27886515 -1118141 - LSU-rRNA_Dme rRNA rRNA 0 3900 3819 1 797 2358 4 0 0 chrUextra 27886615 27886879 -1117777 - IDEFIX_LTR LTR Gypsy -330 264 1 1 797 2451 3 0 3 chrUextra 27886879 27887162 -1117494 - IDEFIX_I LTR Gypsy 0 5628 5347 1 797 5114 0 0 0 chrUextra 27887262 27887806 -1116850 - SSU-rRNA_Dme rRNA rRNA -1087 908 365 1 797 740 45 0 0 chrUextra 27887909 27887997 -1116659 - NTS_DM Other Other -152 88 1 1 797 1654 34 16 37 chrUextra 27887997 27888242 -1116414 - NTS_DM Other Other 0 240 1 1 797 1453 15 19 42 chrUextra 27888242 27888455 -1116201 - NTS_DM Other Other 0 240 33 1 797 2723 171 9 9 chrUextra 27888557 27889101 -1115555 + SAR_DM Satellite Satellite 397 940 -532 1 797 5097 4 0 0 chrUextra 27889201 27889747 -1114909 + SSU-rRNA_Dme rRNA rRNA 173 718 -1277 1 797 1620 0 0 0 chrUextra 27890493 27891039 -1113617 + (TAGA)n Simple_repeat Simple_repeat 1 546 0 1 797 1620 0 0 0 chrUextra 27891139 27891409 -1113247 + (CAAGA)n Simple_repeat Simple_repeat 1 270 0 1 797 22 56 0 0 chrUextra 27891820 27891856 -1112800 + AT_rich Low_complexity Low_complexity 1 36 0 1 797 268 176 0 19 chrUextra 27891869 27891921 -1112735 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 228 196 0 38 chrUextra 27891952 27892005 -1112651 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 233 216 0 19 chrUextra 27892138 27892190 -1112466 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 233 216 0 19 chrUextra 27892230 27892282 -1112374 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 27 0 0 0 chrUextra 27892284 27892311 -1112345 + AT_rich Low_complexity Low_complexity 1 27 0 1 797 5082 0 0 2 chrUextra 27892431 27892977 -1111679 + LSU-rRNA_Dme rRNA rRNA 2774 3318 -582 1 797 2562 175 29 11 chrUextra 27893077 27893621 -1111035 - SAR_DM Satellite Satellite -673 799 246 1 797 2396 104 21 30 chrUextra 27893726 27894253 -1110403 + DMSAT6 Satellite Satellite 1 521 -143 1 797 2769 166 11 6 chrUextra 27895017 27895561 -1109095 - SAR_DM Satellite Satellite -593 879 333 1 797 576 0 0 0 chrUextra 27895661 27895725 -1108931 + (TTCTC)n Simple_repeat Simple_repeat 3 66 0 1 797 1303 92 6 20 chrUextra 27896955 27897499 -1107157 + (CTATT)n Simple_repeat Simple_repeat 1 535 0 1 797 1533 180 20 9 chrUextra 27897599 27898142 -1106514 - SAR_DM Satellite Satellite -543 549 1 1 797 1663 196 67 80 chrUextra 27898245 27898791 -1105865 - TAHRE LINE telomeric -2832 7631 7168 1 797 2392 144 8 31 chrUextra 27898891 27899408 -1105248 - DMSAT6 Satellite Satellite -272 504 1 1 797 5030 2 2 2 chrUextra 27899537 27900083 -1104573 - LSU-rRNA_Dme rRNA rRNA -268 3632 3087 1 797 2221 175 29 55 chrUextra 27900184 27900729 -1103927 - SAR_DM Satellite Satellite -658 814 284 1 797 2453 99 9 58 chrUextra 27901475 27902014 -1102642 + DMSAT6 Satellite Satellite 1 513 -97 1 797 4875 2 6 6 chrUextra 27902121 27902666 -1101990 + LSU-rRNA_Dme rRNA rRNA 1166 1710 -2190 1 797 2504 80 29 15 chrUextra 27902766 27903311 -1101345 + DMSAT6 Satellite Satellite 1 553 -62 1 797 2482 85 11 55 chrUextra 27903416 27903956 -1100700 - DMSAT6 Satellite Satellite 0 516 1 1 797 398 173 37 15 chrUextra 27904056 27904191 -1100465 + GA-rich Low_complexity Low_complexity 5 142 0 1 797 571 137 65 0 chrUextra 27904191 27904239 -1100417 + polypurine Low_complexity Low_complexity 1 51 0 1 797 1469 11 0 6 chrUextra 27904239 27904415 -1100241 + (GAGAA)n Simple_repeat Simple_repeat 5 179 0 1 797 571 137 65 0 chrUextra 27904415 27904534 -1100122 + GA-rich Low_complexity Low_complexity 52 178 0 1 797 1172 36 0 0 chrUextra 27905346 27905484 -1099172 - DM1731_LTR LTR Copia -198 138 1 1 797 721 23 11 0 chrUextra 27905484 27905571 -1099085 - DM297_I LTR Gypsy -6079 88 1 1 797 2763 6 6 9 chrUextra 27905571 27905891 -1098765 - DM297_LTR LTR Gypsy 0 414 96 1 797 1620 0 0 0 chrUextra 27905991 27906303 -1098353 + (GAGAA)n Simple_repeat Simple_repeat 1 312 0 1 797 2494 87 20 22 chrUextra 27906639 27907181 -1097475 - DMSAT6 Satellite Satellite -71 541 1 1 797 2428 112 6 31 chrUextra 27907281 27907804 -1096852 - DMSAT6 Satellite Satellite -80 510 1 1 797 4677 26 31 0 chrUextra 27907926 27908471 -1096185 + IVK_DM LINE I 3715 4276 -1126 1 797 2655 87 18 35 chrUextra 27908571 27909116 -1095540 - DMSAT6 Satellite Satellite -237 536 1 1 797 1587 5 0 0 chrUextra 27909216 27909435 -1095221 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 797 828 72 0 0 chrUextra 27909435 27909560 -1095096 + (AGATG)n Simple_repeat Simple_repeat 2 126 0 1 797 1281 56 0 0 chrUextra 27909560 27909739 -1094917 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 797 4935 2 2 6 chrUextra 27909861 27910406 -1094250 + LSU-rRNA_Dme rRNA rRNA 873 1415 -2485 1 797 1158 122 0 0 chrUextra 27910506 27910944 -1093712 + (TA)n Simple_repeat Simple_repeat 1 438 0 1 797 937 0 0 0 chrUextra 27910946 27911051 -1093605 + NOMAD_LTR LTR Gypsy 1 105 -413 1 797 1828 22 4 59 chrUextra 27911151 27911390 -1093266 - MDG3_LTR LTR Gypsy -41 226 1 1 797 1324 33 17 17 chrUextra 27911390 27911549 -1093107 + FW_DM LINE Jockey 1668 1902 -2790 1 797 564 71 0 23 chrUextra 27911796 27911883 -1092773 + NTS_DM Other Other 117 201 -39 1 797 21 57 0 0 chrUextra 27911883 27911918 -1092738 + AT_rich Low_complexity Low_complexity 1 35 0 1 797 845 37 9 36 chrUextra 27911944 27912056 -1092600 + NTS_DM Other Other 25 133 -107 1 797 864 10 0 0 chrUextra 27912056 27912152 -1092504 + NTS_DM Other Other 38 133 -107 1 797 1294 54 16 21 chrUextra 27912152 27912340 -1092316 + NTS_DM Other Other 38 224 -16 1 797 2455 104 20 15 chrUextra 27912441 27912986 -1091670 - DMSAT6 Satellite Satellite -1 547 1 1 797 5065 0 0 2 chrUextra 27913086 27913631 -1091025 + LSU-rRNA_Dme rRNA rRNA 2763 3306 -594 1 797 394 213 21 75 chrUextra 27913735 27913923 -1090733 + CT-rich Low_complexity Low_complexity 1 178 0 1 797 417 393 0 17 chrUextra 27913937 27914118 -1090538 + polypyrimidine Low_complexity Low_complexity 1 178 0 1 797 4036 23 175 0 chrUextra 27914405 27914919 -1089737 - DMCR1A LINE CR1 -1536 2934 2331 1 797 1656 0 0 0 chrUextra 27915020 27915196 -1089460 + LSU-rRNA_Dme rRNA rRNA 3725 3900 0 1 797 27 0 0 0 chrUextra 27915268 27915295 -1089361 + AT_rich Low_complexity Low_complexity 1 27 0 1 797 268 196 0 19 chrUextra 27915297 27915349 -1089307 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 797 268 196 0 19 chrUextra 27915389 27915441 -1089215 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 797 238 196 0 38 chrUextra 27915481 27915534 -1089122 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 797 2774 165 9 9 chrUextra 27916307 27916851 -1087805 - SAR_DM Satellite Satellite -549 923 380 1 797 4368 6 0 2 chrUextra 27917020 27917495 -1087161 + SSU-rRNA_Dme rRNA rRNA 1 474 -1521 1 797 2413 196 13 6 chrUextra 27917595 27918134 -1086522 - SAR_DM Satellite Satellite -684 788 246 1 797 256 156 0 0 chrUextra 27918094 27918139 -1086517 + ARS406_DM Unknown Unknown 1 45 -308 1 797 207 250 0 0 chrUextra 27918245 27918289 -1086367 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 798 2825 161 17 4 chrUextra 27918883 27919418 -1085238 - SAR_DM Satellite Satellite -610 862 321 1 798 2491 194 9 4 chrUextra 27920173 27920715 -1083941 + SAR_DM Satellite Satellite 246 790 -682 1 798 734 0 0 0 chrUextra 27920815 27920895 -1083761 - NTS_DM Other Other -123 117 38 1 798 918 28 0 0 chrUextra 27920895 27921002 -1083654 - NTS_DM Other Other -107 133 27 1 798 1350 18 0 6 chrUextra 27921059 27921224 -1083432 - NTS_DM Other Other -39 201 38 1 798 936 9 0 27 chrUextra 27921224 27921336 -1083320 - NTS_DM Other Other -107 133 25 1 798 1620 0 0 0 chrUextra 27921481 27921661 -1082995 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 1 798 1021 86 12 6 chrUextra 27921663 27921826 -1082830 + (TATAA)n Simple_repeat Simple_repeat 5 168 0 1 798 1371 57 0 0 chrUextra 27921826 27922003 -1082653 + (CAATA)n Simple_repeat Simple_repeat 2 178 0 1 798 4688 26 2 0 chrUextra 27922747 27923291 -1081365 - MDG1_I LTR Gypsy -664 5932 5388 1 798 1557 42 3 15 chrUextra 27923391 27923787 -1080869 + (TTCTC)n Simple_repeat Simple_repeat 1 391 0 1 798 225 140 53 0 chrUextra 27923779 27923836 -1080820 + CT-rich Low_complexity Low_complexity 2 61 0 1 798 198 23 64 64 chrUextra 27923869 27923916 -1080740 + GA-rich Low_complexity Low_complexity 3 49 0 1 798 4723 18 6 0 chrUextra 27924035 27924579 -1080077 + ROO_I LTR Pao 6681 7227 -1029 1 798 2158 80 7 0 chrUextra 27924679 27924968 -1079688 - R1_DM LINE R1 -5065 291 1 1 798 1015 26 0 0 chrUextra 27925001 27925115 -1079541 - R1_DM LINE R1 0 5356 5243 1 798 952 27 0 0 chrUextra 27925112 27925223 -1079433 - R1_DM LINE R1 -290 5066 4956 1 798 2502 83 15 66 chrUextra 27925339 27925867 -1078789 - DMSAT6 Satellite Satellite 0 500 1 1 798 28 0 0 0 chrUextra 27926181 27926209 -1078447 + AT_rich Low_complexity Low_complexity 1 28 0 1 798 610 140 18 0 chrUextra 27926232 27926346 -1078310 - HETA LINE telomeric -171 5910 5795 1 798 324 228 180 90 chrUextra 27926333 27926511 -1078145 - TART LINE telomeric -4163 10314 10121 1 798 4986 0 0 2 chrUextra 27926611 27927155 -1077501 + FW_DM LINE Jockey 3634 4176 -516 1 798 1087 115 6 11 chrUextra 27927262 27927438 -1077218 - SAR_DM Satellite Satellite -569 903 729 1 798 1689 172 9 15 chrUextra 27927456 27927798 -1076858 - SAR_DM Satellite Satellite -466 1006 667 1 798 2662 165 24 11 chrUextra 27927899 27928432 -1076224 - SAR_DM Satellite Satellite -651 821 282 1 798 4916 4 4 4 chrUextra 27928543 27929087 -1075569 - LSU-rRNA_Dme rRNA rRNA -2311 1589 1046 1 798 551 85 12 0 chrUextra 27929187 27929269 -1075387 + (ATAAG)n Simple_repeat Simple_repeat 1 83 0 1 798 1104 0 0 22 chrUextra 27929269 27929333 -1075323 + (CAAG)n Simple_repeat Simple_repeat 1 64 0 1 798 1231 0 31 0 chrUextra 27929333 27929492 -1075164 + (CAAGA)n Simple_repeat Simple_repeat 1 164 0 1 798 1104 0 0 22 chrUextra 27929492 27929553 -1075103 + (CAAG)n Simple_repeat Simple_repeat 1 60 0 1 798 941 6 78 0 chrUextra 27929553 27929719 -1074937 + (CAAGA)n Simple_repeat Simple_repeat 1 179 0 1 798 1104 0 0 22 chrUextra 27929719 27929731 -1074925 + (CAAG)n Simple_repeat Simple_repeat 1 12 0 1 798 5055 0 0 2 chrUextra 27929831 27930375 -1074281 - LSU-rRNA_Dme rRNA rRNA -591 3309 2767 1 798 300 111 0 0 chrUextra 27930475 27930520 -1074136 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1 798 1158 122 0 0 chrUextra 27930519 27930883 -1073773 + (TA)n Simple_repeat Simple_repeat 1 364 0 1 798 1233 0 0 0 chrUextra 27930887 27931018 -1073638 - NOMAD_LTR LTR Gypsy 0 518 388 1 798 1134 120 0 0 chrUextra 27931118 27931293 -1073363 + (TA)n Simple_repeat Simple_repeat 2 176 0 1 798 313 271 74 0 chrUextra 27931471 27931593 -1073063 + MICROPIA_I LTR Gypsy 1003 1133 -3343 1 798 332 271 0 0 chrUextra 27931576 27931661 -1072995 + MICROPIA_I LTR Gypsy 1682 1766 -2710 1 798 1163 28 7 0 chrUextra 27931761 27931903 -1072753 - NINJA_I LTR Pao -1751 4260 4118 1 798 3342 20 22 0 chrUextra 27931903 27932304 -1072352 - NINJA_I LTR Pao -3200 2811 2402 1 798 468 48 0 0 chrUextra 27932404 27932467 -1072189 + (TTCTC)n Simple_repeat Simple_repeat 2 64 0 1 798 1620 0 0 0 chrUextra 27932480 27932945 -1071711 + (GAGAA)n Simple_repeat Simple_repeat 1 465 0 1 798 2214 191 22 18 chrUextra 27933047 27933590 -1071066 - SAR_DM Satellite Satellite -359 1113 569 1 798 5021 0 0 0 chrUextra 27933690 27934233 -1070423 - ROO_I LTR Pao -5749 2507 1965 1 798 761 12 0 0 chrUextra 27934333 27934419 -1070237 + DMRT1B LINE R1 5098 5183 0 1 798 4096 13 0 0 chrUextra 27934422 27934876 -1069780 - R1_DM LINE R1 -760 4596 4143 1 798 2641 177 9 9 chrUextra 27934976 27935519 -1069137 + SAR_DM Satellite Satellite 436 978 -494 1 798 4443 35 0 2 chrUextra 27935619 27936162 -1068494 - ROO_I LTR Pao -3119 5137 4596 1 798 2560 93 14 43 chrUextra 27936283 27936767 -1067889 + DMSAT6 Satellite Satellite 1 470 0 1 798 5064 2 2 0 chrUextra 27937548 27938091 -1066565 + SSU-rRNA_Dme rRNA rRNA 198 741 -1254 1 798 2075 143 157 0 chrUextra 27938269 27938734 -1065922 - DMRT1C LINE R1 -57 5386 4849 1 798 2500 187 15 6 chrUextra 27938835 27939373 -1065283 - SAR_DM Satellite Satellite -684 788 246 1 798 747 0 0 0 chrUextra 27939477 27939560 -1065096 + (TTGTG)n Simple_repeat Simple_repeat 3 85 0 1 798 202 265 0 0 chrUextra 27940122 27940171 -1064485 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 798 2823 176 6 2 chrUextra 27940765 27941306 -1063350 - SAR_DM Satellite Satellite -587 885 343 1 798 5029 0 0 2 chrUextra 27941406 27941949 -1062707 + LSU-rRNA_Dme rRNA rRNA 695 1236 -2664 1 798 2450 175 11 9 chrUextra 27942049 27942592 -1062064 + SAR_DM Satellite Satellite 1 543 -396 1 798 1158 122 0 0 chrUextra 27942694 27942980 -1061676 + (TA)n Simple_repeat Simple_repeat 1 286 0 1 798 249 303 60 40 chrUextra 27942983 27943134 -1061522 - Gypsy4_I LTR Gypsy -192 6096 5943 1 798 2726 68 23 32 chrUextra 27943351 27943874 -1060782 - DMSAT6 Satellite Satellite 0 518 1 1 798 4912 0 6 4 chrUextra 27943976 27944518 -1060138 - SSU-rRNA_Dme rRNA rRNA -414 1581 1039 1 798 4105 7 0 2 chrUextra 27944618 27945070 -1059586 + LSU-rRNA_Dme rRNA rRNA 2182 2632 -1268 1 798 799 0 11 0 chrUextra 27945070 27945160 -1059496 + R1_DM LINE R1 1 91 -5265 1 798 470 19 0 0 chrUextra 27945260 27945313 -1059343 - NTS_DM Other Other -150 90 38 1 798 870 0 0 0 chrUextra 27945313 27945409 -1059247 - NTS_DM Other Other -107 133 38 1 798 860 9 9 36 chrUextra 27945409 27945521 -1059135 - NTS_DM Other Other -107 133 25 1 798 21 57 0 0 chrUextra 27945547 27945582 -1059074 + AT_rich Low_complexity Low_complexity 1 35 0 1 798 1316 24 0 6 chrUextra 27945582 27945747 -1058909 - NTS_DM Other Other -39 201 38 1 798 428 18 0 0 chrUextra 27945747 27945802 -1058854 - NTS_DM Other Other -107 133 79 1 798 2452 96 20 30 chrUextra 27946544 27947086 -1057570 - DMSAT6 Satellite Satellite -114 536 1 1 798 972 60 0 18 chrUextra 27947193 27947728 -1056928 - RSP Satellite Satellite 0 525 1 1 798 202 265 0 0 chrUextra 27948298 27948347 -1056309 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 798 1159 20 0 13 chrUextra 27949112 27949261 -1055395 - NTS_DM Other Other -56 184 38 1 798 928 9 0 27 chrUextra 27949261 27949373 -1055283 - NTS_DM Other Other -107 133 25 1 798 22 56 0 0 chrUextra 27949399 27949435 -1055221 + AT_rich Low_complexity Low_complexity 1 36 0 1 798 277 176 0 19 chrUextra 27949448 27949500 -1055156 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 266 196 0 19 chrUextra 27949531 27949583 -1055073 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 2451 31 0 9 chrUextra 27949754 27950074 -1054582 + HMSBEAGLE_I LTR Gypsy 478 796 -5733 1 798 953 35 52 12 chrUextra 27950074 27950246 -1054410 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 798 2451 0 0 4300 chrUextra 27950246 27950296 -1054360 + HMSBEAGLE_I LTR Gypsy 797 802 -5727 1 798 2618 101 21 11 chrUextra 27950396 27950919 -1053737 + DMSAT6 Satellite Satellite 1 528 -64 1 798 2610 73 25 29 chrUextra 27951055 27951580 -1053076 + DMSAT6 Satellite Satellite 1 522 0 1 798 2483 184 15 7 chrUextra 27951680 27952218 -1052438 - SAR_DM Satellite Satellite -685 787 246 1 798 540 0 0 0 chrUextra 27953242 27953302 -1051354 + (A)n Simple_repeat Simple_repeat 1 60 0 1 798 2547 83 22 52 chrUextra 27953607 27954143 -1050513 + DMSAT6 Satellite Satellite 1 519 0 1 798 430 0 0 57 chrUextra 27954246 27954299 -1050357 - NTS_DM Other Other -166 74 25 1 798 1332 18 0 6 chrUextra 27954351 27954516 -1050140 - NTS_DM Other Other -39 201 38 1 798 928 9 0 27 chrUextra 27954516 27954628 -1050028 - NTS_DM Other Other -107 133 25 1 798 22 56 0 0 chrUextra 27954654 27954690 -1049966 + AT_rich Low_complexity Low_complexity 1 36 0 1 798 277 176 0 19 chrUextra 27954703 27954755 -1049901 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 5025 0 0 2 chrUextra 27954887 27955428 -1049228 - SSU-rRNA_Dme rRNA rRNA -1029 966 427 1 798 1174 51 17 22 chrUextra 27955529 27955710 -1048946 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 798 711 121 34 34 chrUextra 27955720 27955899 -1048757 + CT-rich Low_complexity Low_complexity 1 179 0 1 798 356 194 78 12 chrUextra 27955902 27956069 -1048587 + (CATCT)n Simple_repeat Simple_repeat 3 180 0 1 798 2377 192 11 7 chrUextra 27956169 27956710 -1047946 + SAR_DM Satellite Satellite 253 795 -677 1 798 2645 168 20 6 chrUextra 27956810 27957350 -1047306 - SAR_DM Satellite Satellite -554 918 371 1 798 717 163 34 19 chrUextra 27958733 27959269 -1045387 + GA-rich Low_complexity Low_complexity 1 544 0 1 798 4452 4 2 2 chrUextra 27960017 27960506 -1044150 + LSU-rRNA_Dme rRNA rRNA 2071 2559 -1341 1 798 425 0 0 0 chrUextra 27960508 27960554 -1044102 + R2_DM LINE R2 2554 2599 -1008 1 798 4827 9 6 0 chrUextra 27960654 27961194 -1043462 - DOC2_DM LINE Jockey -2532 2261 1719 1 798 2441 182 11 11 chrUextra 27961299 27961833 -1042823 - SAR_DM Satellite Satellite -514 958 425 1 798 2283 181 25 13 chrUextra 27961934 27962460 -1042196 - SAR_DM Satellite Satellite -695 777 246 1 798 324 111 19 0 chrUextra 27962420 27962474 -1042182 + ARS406_DM Unknown Unknown 1 55 -298 1 798 2571 100 26 17 chrUextra 27962579 27963107 -1041549 + DMSAT6 Satellite Satellite 1 533 -164 1 798 827 11 0 0 chrUextra 27963214 27963304 -1041352 - NTS_DM Other Other -150 90 1 1 798 1871 17 17 17 chrUextra 27963304 27963544 -1041112 - NTS_DM Other Other 0 240 1 1 798 1578 19 19 19 chrUextra 27963544 27963754 -1040902 - NTS_DM Other Other 0 240 31 1 798 2448 4 0 0 chrUextra 27964526 27964793 -1039863 - MDG3_LTR LTR Gypsy 0 267 1 1 798 2042 12 0 0 chrUextra 27964793 27965034 -1039622 - MDG3_I LTR Gypsy 0 4986 4746 1 798 2567 109 19 11 chrUextra 27965135 27965674 -1038982 + DMSAT6 Satellite Satellite 1 543 -82 1 798 2737 165 11 7 chrUextra 27965774 27966312 -1038344 + SAR_DM Satellite Satellite 381 920 -552 1 798 878 19 9 27 chrUextra 27966414 27966525 -1038131 + NTS_DM Other Other 25 133 -107 1 798 870 0 0 0 chrUextra 27966525 27966621 -1038035 + NTS_DM Other Other 38 133 -107 1 798 1477 20 20 25 chrUextra 27966621 27966825 -1037831 + NTS_DM Other Other 38 240 0 1 798 1127 23 0 0 chrUextra 27966825 27966954 -1037702 + NTS_DM Other Other 1 129 -111 1 798 1408 62 0 0 chrUextra 27967054 27967232 -1037424 - R2_DM LINE R2 -1636 1971 1794 1 798 891 39 0 0 chrUextra 27967230 27967333 -1037323 - LSU-rRNA_Dme rRNA rRNA -1320 2580 2478 1 798 2281 22 4 14 chrUextra 27967318 27967594 -1037062 - LSU-rRNA_Dme rRNA rRNA -1531 2369 2097 1 798 4522 19 35 4 chrUextra 27967694 27968234 -1036422 + R1_DM LINE R1 2665 3221 -2135 1 798 2439 109 24 19 chrUextra 27968334 27968874 -1035782 + DMSAT6 Satellite Satellite 1 542 -54 1 798 2605 180 7 4 chrUextra 27968974 27969514 -1035142 - SAR_DM Satellite Satellite -627 845 304 1 798 2650 87 19 25 chrUextra 27969630 27970153 -1034503 - DMSAT6 Satellite Satellite 0 519 1 1 798 2282 82 2 48 chrUextra 27970253 27970792 -1033864 + DMSAT6 Satellite Satellite 1 513 -149 1 798 256 196 0 19 chrUextra 27970920 27970972 -1033684 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 3270 11 0 0 chrUextra 27971073 27971431 -1033225 - LSU-rRNA_Dme rRNA rRNA 0 3900 3543 1 798 395 0 0 163 chrUextra 27971855 27972070 -1032586 + (CTATG)n Simple_repeat Simple_repeat 1 180 0 1 798 1203 84 34 5 chrUextra 27972809 27973140 -1031516 + PROTOP_A DNA P 569 773 -332 1 798 1104 67 0 0 chrUextra 27973184 27973348 -1031308 - DOC LINE Jockey 0 4725 4562 1 798 1547 5 0 5 chrUextra 27973777 27973987 -1030669 + (TTCTC)n Simple_repeat Simple_repeat 1 209 0 1 798 2581 175 21 8 chrUextra 27974088 27974619 -1030037 + SAR_DM Satellite Satellite 539 1076 -396 1 798 384 23 0 0 chrUextra 27974726 27974769 -1029887 - NTS_DM Other Other -197 43 1 1 798 1507 20 20 20 chrUextra 27974769 27974972 -1029684 - NTS_DM Other Other 0 240 38 1 798 870 0 0 0 chrUextra 27974972 27975068 -1029588 - NTS_DM Other Other -107 133 38 1 798 890 9 9 27 chrUextra 27975068 27975179 -1029477 - NTS_DM Other Other -107 133 25 1 798 4117 38 15 2 chrUextra 27975376 27975904 -1028752 - TAHRE LINE telomeric -2156 8307 7773 1 798 2602 85 16 41 chrUextra 27976026 27976543 -1028113 + DMSAT6 Satellite Satellite 1 503 -3 1 798 1620 0 0 0 chrUextra 27976652 27976936 -1027720 + (TCTTG)n Simple_repeat Simple_repeat 1 284 0 1 798 997 72 9 20 chrUextra 27977283 27977821 -1026835 - RSP Satellite Satellite -23 532 1 1 798 2535 99 13 15 chrUextra 27977923 27978457 -1026199 + DMSAT6 Satellite Satellite 1 532 -82 1 798 270 0 0 0 chrUextra 27978560 27978589 -1026067 - NTS_DM Other Other -211 29 1 1 798 1951 8 17 13 chrUextra 27978589 27978828 -1025828 - NTS_DM Other Other 0 240 1 1 798 1958 8 17 13 chrUextra 27978828 27979067 -1025589 - NTS_DM Other Other 0 240 1 1 798 531 0 0 0 chrUextra 27979838 27979897 -1024759 + (TTCTC)n Simple_repeat Simple_repeat 3 61 0 1 798 524 87 0 11 chrUextra 27979899 27979992 -1024664 + (CGAGA)n Simple_repeat Simple_repeat 4 95 0 1 798 1620 0 0 0 chrUextra 27979993 27980353 -1024303 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 798 2626 182 9 2 chrUextra 27980478 27981013 -1023643 - SAR_DM Satellite Satellite -602 870 332 1 798 1620 22 2 0 chrUextra 27981115 27981653 -1023003 + (TATAA)n Simple_repeat Simple_repeat 1 538 0 1 798 2433 101 23 44 chrUextra 27981753 27982272 -1022384 - DMSAT6 Satellite Satellite -281 507 1 1 798 4887 4 2 2 chrUextra 27982391 27982929 -1021727 + LSU-rRNA_Dme rRNA rRNA 811 1348 -2552 1 798 1620 11 0 0 chrUextra 27983029 27983315 -1021341 + (CACAA)n Simple_repeat Simple_repeat 1 286 0 1 798 2241 16 0 0 chrUextra 27983315 27983567 -1021089 - DMRT1B LINE R1 -140 5043 4792 1 798 4484 2 2 0 chrUextra 27984305 27984785 -1019871 + SSU-rRNA_Dme rRNA rRNA 1515 1995 0 1 798 4926 2 0 4 chrUextra 27984943 27985481 -1019175 + LSU-rRNA_Dme rRNA rRNA 1979 2514 -1386 1 798 1620 33 0 0 chrUextra 27985605 27986117 -1018539 + (TTCTC)n Simple_repeat Simple_repeat 1 512 0 1 798 1101 15 15 15 chrUextra 27986219 27986355 -1018301 - DM297_LTR LTR Gypsy -278 136 1 1 798 667 190 0 0 chrUextra 27986607 27986728 -1017928 + DMRT1B LINE R1 2589 2709 -2474 1 798 2580 88 26 18 chrUextra 27987526 27988033 -1016623 - DMSAT6 Satellite Satellite 0 510 1 1 798 281 106 0 21 chrUextra 27988136 27988184 -1016472 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 798 2487 7 7 0 chrUextra 27988374 27988671 -1015985 - DOC LINE Jockey 0 4725 4427 1 798 2626 81 43 14 chrUextra 27988796 27989309 -1015347 - DMSAT6 Satellite Satellite 0 528 1 1 798 4270 2 4 6 chrUextra 27989409 27989890 -1014766 + LSU-rRNA_Dme rRNA rRNA 1312 1791 -2109 1 798 912 9 0 0 chrUextra 27990480 27990585 -1014071 + (CAAGA)n Simple_repeat Simple_repeat 1 105 0 1 798 34 24 0 0 chrUextra 27991053 27991094 -1013562 + AT_rich Low_complexity Low_complexity 1 41 0 1 798 579 15 0 0 chrUextra 27991323 27991391 -1013265 + (TTCTC)n Simple_repeat Simple_repeat 5 72 0 1 798 2783 23 29 3 chrUextra 27991961 27992309 -1012347 + TABOR_I LTR Gypsy 1109 1465 -4871 1 798 876 34 89 17 chrUextra 27992284 27992464 -1012192 + TABOR_I LTR Gypsy 5972 6164 -172 1 798 34 0 0 0 chrUextra 27992464 27992498 -1012158 + AT_rich Low_complexity Low_complexity 1 34 0 1 798 4918 0 0 4 chrUextra 27992598 27993135 -1011521 + SSU-rRNA_Dme rRNA rRNA 534 1068 -927 1 798 439 42 0 27 chrUextra 27993872 27993946 -1010710 + NTS_DM Other Other 130 201 -39 1 798 890 9 9 27 chrUextra 27993998 27994109 -1010547 + NTS_DM Other Other 25 133 -107 1 798 1332 18 0 6 chrUextra 27994109 27994274 -1010382 + NTS_DM Other Other 38 201 -39 1 798 610 40 0 13 chrUextra 27994333 27994409 -1010247 + NTS_DM Other Other 27 101 -139 1 798 411 19 0 19 chrUextra 27994509 27994562 -1010094 + LSU-rRNA_Dme rRNA rRNA 1740 1791 -2109 1 798 4123 2 0 0 chrUextra 27994604 27995046 -1009610 + LSU-rRNA_Dme rRNA rRNA 1788 2229 -1671 1 798 2263 96 243 17 chrUextra 27995146 27995611 -1009045 + ACCORD2_I LTR Gypsy 1205 1774 -5438 1 798 643 51 0 0 chrUextra 27995604 27995683 -1008973 + ACCORD2_I LTR Gypsy 7122 7200 -12 1 798 34 24 0 0 chrUextra 27996151 27996192 -1008464 + AT_rich Low_complexity Low_complexity 1 41 0 1 798 2388 114 4 73 chrUextra 27996435 27996928 -1007728 - DMSAT6 Satellite Satellite -3 467 9 1 798 1024 43 242 23 chrUextra 27997057 27997272 -1007384 + ACCORD2_I LTR Gypsy 1513 1774 -5438 1 798 696 68 0 0 chrUextra 27997265 27997353 -1007303 + ACCORD2_I LTR Gypsy 7122 7209 -3 1 798 1826 28 0 18 chrUextra 27997351 27997569 -1007087 + ACCORD2_LTR LTR Gypsy 1 214 -1 1 798 1578 28 0 0 chrUextra 27997698 27998055 -1006601 + (GAGAA)n Simple_repeat Simple_repeat 1 357 0 1 798 4811 9 4 0 chrUextra 27998331 27998868 -1005788 + R1_DM LINE R1 2570 3108 -2248 1 798 986 73 8 19 chrUextra 27998986 27999505 -1005151 + RSP Satellite Satellite 1 513 0 1 798 3640 78 15 4 chrUextra 28000242 28000779 -1003877 - PROTOP DNA P -3741 739 197 1 798 2595 100 17 8 chrUextra 28001515 28002051 -1002605 + DMSAT6 Satellite Satellite 1 540 0 1 798 4427 52 2 2 chrUextra 28002151 28002687 -1001969 + R1_DM LINE R1 1037 1572 -3784 1 798 4657 17 2 4 chrUextra 28002787 28003323 -1001333 - R1_DM LINE R1 -1407 3949 3415 1 798 2250 176 12 12 chrUextra 28004061 28004549 -1000107 - SAR_DM Satellite Satellite -478 994 507 1 798 252 0 0 0 chrUextra 28004549 28004577 -1000079 + (T)n Simple_repeat Simple_repeat 1 28 0 1 798 1512 0 0 0 chrUextra 28005331 28005499 -999157 + (CAAGA)n Simple_repeat Simple_repeat 1 168 0 1 798 939 78 0 0 chrUextra 28005967 28006109 -998547 + (CTAGT)n Simple_repeat Simple_repeat 3 144 0 1 798 1620 0 0 13 chrUextra 28006110 28006503 -998153 + (CTAG)n Simple_repeat Simple_repeat 1 388 0 1 798 1401 46 0 0 chrUextra 28006887 28007126 -997530 + (CAAGA)n Simple_repeat Simple_repeat 1 239 0 1 798 232 200 0 16 chrUextra 28007611 28007672 -996984 + (TTA)n Simple_repeat Simple_repeat 2 61 0 1 798 2294 106 35 62 chrUextra 28007893 28008411 -996245 + DMSAT6 Satellite Satellite 1 503 -3 1 798 4987 0 4 0 chrUextra 28008511 28009047 -995609 - LSU-rRNA_Dme rRNA rRNA -61 3839 3302 1 798 207 196 0 21 chrUextra 28009447 28009494 -995162 + (CTCG)n Simple_repeat Simple_repeat 1 46 0 1 798 2419 0 0 0 chrUextra 28009783 28010046 -994610 - Stalker2_LTR LTR Gypsy -161 263 1 1 798 2040 7 4 0 chrUextra 28010046 28010319 -994337 - Stalker2_I LTR Gypsy 0 7402 7129 1 798 2751 88 22 4 chrUextra 28010419 28010954 -993702 + DMSAT6 Satellite Satellite 1 545 -97 1 798 2621 87 2 60 chrUextra 28011054 28011589 -993067 + DMSAT6 Satellite Satellite 1 504 0 1 798 2714 182 29 17 chrUextra 28012336 28013487 -991169 - DMSAT6 Satellite Satellite 0 1164 1 1 798 3791 0 0 0 chrUextra 28013594 28014020 -990636 + DOC LINE Jockey 4300 4725 0 1 798 905 0 66 0 chrUextra 28014023 28014129 -990527 - Gypsy4_I LTR Gypsy -2448 3840 3728 1 798 1747 18 13 18 chrUextra 28014230 28014455 -990201 - NTS_DM Other Other -16 224 1 1 798 1477 20 20 25 chrUextra 28014455 28014659 -989997 - NTS_DM Other Other 0 240 38 1 798 870 0 0 0 chrUextra 28014659 28014755 -989901 - NTS_DM Other Other -107 133 38 1 798 1620 43 0 2 chrUextra 28014881 28015392 -989264 + (TTCTC)n Simple_repeat Simple_repeat 1 509 0 1 798 2157 80 9 6 chrUextra 28015696 28016034 -988622 + S_DM DNA Tc1 1 339 -1397 1 798 4109 52 0 0 chrUextra 28016134 28016669 -987987 + IDEFIX_I LTR Gypsy 4691 5225 -403 1 798 873 19 0 0 chrUextra 28016769 28016872 -987784 + (TTGTG)n Simple_repeat Simple_repeat 1 103 0 1 798 1473 36 0 19 chrUextra 28016883 28017301 -987355 + (TTGTG)n Simple_repeat Simple_repeat 1 409 0 1 798 2548 173 8 11 chrUextra 28017404 28017937 -986719 - SAR_DM Satellite Satellite -446 1026 496 1 798 2418 101 6 39 chrUextra 28018071 28018554 -986102 + DMSAT6 Satellite Satellite 1 467 -3 1 798 4860 2 4 4 chrUextra 28018674 28019209 -985447 + SSU-rRNA_Dme rRNA rRNA 815 1349 -646 1 798 21 36 0 0 chrUextra 28021863 28021891 -982765 + AT_rich Low_complexity Low_complexity 1 28 0 1 798 928 9 0 27 chrUextra 28021917 28022029 -982627 + NTS_DM Other Other 25 133 -107 1 798 1332 18 0 6 chrUextra 28022029 28022194 -982462 + NTS_DM Other Other 38 201 -39 1 798 21 57 0 0 chrUextra 28022194 28022229 -982427 + AT_rich Low_complexity Low_complexity 1 35 0 1 798 825 37 9 27 chrUextra 28022255 28022366 -982290 + NTS_DM Other Other 25 133 -107 1 798 1328 6 0 30 chrUextra 28022525 28022692 -981964 - NTS_DM Other Other -78 162 1 1 798 1972 4 17 13 chrUextra 28022692 28022931 -981725 - NTS_DM Other Other 0 240 1 1 798 576 0 49 37 chrUextra 28022931 28023013 -981643 - NTS_DM Other Other 0 240 158 1 798 2503 113 19 21 chrUextra 28023113 28023646 -981010 + DMSAT6 Satellite Satellite 1 531 -141 1 798 1719 87 129 21 chrUextra 28023747 28024119 -980537 + Gypsy12_I LTR Gypsy 4879 5290 -256 1 798 386 196 38 38 chrUextra 28024112 28024218 -980438 + Gypsy12_LTR LTR Gypsy 293 398 -1938 1 798 432 106 43 86 chrUextra 28024188 28024281 -980375 + Gypsy12_I LTR Gypsy 27 115 -5431 1 798 240 35 0 0 chrUextra 28024821 28024850 -979806 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 798 3656 67 0 11 chrUextra 28025648 28026181 -978475 - NOMAD_I LTR Gypsy -702 5870 5344 1 798 4605 28 4 2 chrUextra 28026914 28027447 -977209 - R1_DM LINE R1 -1929 3427 2894 1 798 1158 139 0 0 chrUextra 28028180 28028699 -975957 + (TA)n Simple_repeat Simple_repeat 1 519 0 1 798 4895 2 0 0 chrUextra 28028813 28029346 -975310 - R1_DM LINE R1 -3503 1853 1321 1 798 1620 2 0 7 chrUextra 28029446 28029979 -974677 + (TAGA)n Simple_repeat Simple_repeat 1 529 0 1 798 2510 106 19 27 chrUextra 28030079 28030604 -974052 + DMSAT6 Satellite Satellite 1 521 -74 1 798 1076 8 0 0 chrUextra 28030712 28030831 -973825 + 5S_DM RNA RNA 17 135 0 1 798 1231 7 0 0 chrUextra 28031058 28031193 -973463 + 5S_DM RNA RNA 1 135 0 1 798 1620 3 0 0 chrUextra 28031557 28031878 -972778 + (TTGTG)n Simple_repeat Simple_repeat 1 321 0 1 798 4976 2 2 0 chrUextra 28031978 28032511 -972145 - LSU-rRNA_Dme rRNA rRNA -266 3634 3101 1 798 2707 168 8 6 chrUextra 28032611 28033144 -971512 - SAR_DM Satellite Satellite -539 933 400 1 798 355 7 0 158 chrUextra 28033247 28033430 -971226 + (CAAAG)n Simple_repeat Simple_repeat 2 155 0 1 798 3800 2 0 56 chrUextra 28033947 28034408 -970248 + LSU-rRNA_Dme rRNA rRNA 1 435 -3465 1 798 4734 13 0 2 chrUextra 28035772 28036304 -968352 - FW_DM LINE Jockey -1787 2905 2375 1 798 2839 62 28 2 chrUextra 28036405 28036936 -967720 + DMSAT6 Satellite Satellite 1 544 0 1 798 1731 270 0 0 chrUextra 28037070 28037562 -967094 + Copia_I LTR Copia 1599 2090 -2503 1 798 4903 2 2 0 chrUextra 28037668 28038199 -966457 + LSU-rRNA_Dme rRNA rRNA 735 1266 -2634 1 798 3921 52 20 2 chrUextra 28038332 28038832 -965824 + R1_DM LINE R1 622 1130 -4226 1 798 961 8 0 0 chrUextra 28039564 28039693 -964963 + FW_DM LINE Jockey 4564 4692 0 1 798 809 62 102 0 chrUextra 28039700 28039828 -964828 + MDG1_I LTR Gypsy 4735 4875 -1721 1 798 1272 7 0 0 chrUextra 28039828 28039973 -964683 + (TAA)n Simple_repeat Simple_repeat 3 147 0 1 798 466 124 185 50 chrUextra 28039973 28040067 -964589 + MDG1_LTR LTR Gypsy 87 201 -241 1 798 267 57 0 0 chrUextra 28040061 28040096 -964560 + FW_DM LINE Jockey 4547 4581 -111 1 798 4780 4 0 0 chrUextra 28040828 28041343 -963313 - LSU-rRNA_Dme rRNA rRNA -746 3154 2640 1 798 4113 57 4 11 chrUextra 28041460 28041992 -962664 - BATUMI_I LTR Pao -4254 3709 3182 1 798 2776 171 6 2 chrUextra 28042095 28042623 -962033 - SAR_DM Satellite Satellite -610 862 333 1 798 2381 98 11 60 chrUextra 28042724 28043256 -961400 + DMSAT6 Satellite Satellite 1 505 0 1 798 1017 0 0 0 chrUextra 28043356 28043469 -961187 + (GAGAA)n Simple_repeat Simple_repeat 4 116 0 1 798 2567 91 23 29 chrUextra 28043987 28044500 -960156 + DMSAT6 Satellite Satellite 1 510 -97 1 798 4631 11 0 0 chrUextra 28044618 28045149 -959507 - CIRCE LINE Composite -1282 5074 4544 1 798 4673 17 2 4 chrUextra 28045249 28045780 -958876 - SSU-rRNA_Dme rRNA rRNA -680 1315 786 1 798 1620 4 0 0 chrUextra 28045882 28046411 -958245 + (TCTA)n Simple_repeat Simple_repeat 1 529 0 1 798 909 18 0 27 chrUextra 28046527 28046639 -958017 - NTS_DM Other Other -107 133 25 1 798 1309 24 0 6 chrUextra 28046691 28046856 -957800 - NTS_DM Other Other -39 201 38 1 798 928 9 0 27 chrUextra 28046856 28046968 -957688 - NTS_DM Other Other -107 133 25 1 798 22 56 0 0 chrUextra 28046994 28047030 -957626 + AT_rich Low_complexity Low_complexity 1 36 0 1 798 2558 169 19 32 chrUextra 28047142 28048302 -956354 + DMSAT6 Satellite Satellite 1 1145 0 1 798 2622 171 9 8 chrUextra 28048404 28048934 -955722 - SAR_DM Satellite Satellite -435 1037 507 1 798 978 9 0 9 chrUextra 28049035 28049147 -955509 - G_DM LINE Jockey -4235 111 1 1 798 249 160 19 39 chrUextra 28049208 28049260 -955396 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 798 254 186 0 0 chrUextra 28049309 28049352 -955304 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 1 799 1071 8 0 15 chrUextra 28049433 28049566 -955090 - G_DM LINE Jockey 0 4346 4216 1 799 4690 2 0 2 chrUextra 28049666 28050197 -954459 + ROO_I LTR Pao 2857 3386 -4870 1 799 1488 39 0 0 chrUextra 28050297 28050630 -954026 + (CTTAT)n Simple_repeat Simple_repeat 1 333 0 1 799 1224 67 0 0 chrUextra 28050645 28050825 -953831 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 799 32 0 0 0 chrUextra 28051045 28051077 -953579 + AT_rich Low_complexity Low_complexity 1 32 0 1 799 28 48 0 0 chrUextra 28051406 28051448 -953208 + AT_rich Low_complexity Low_complexity 1 42 0 1 799 2229 190 30 6 chrUextra 28051562 28052069 -952587 - SAR_DM Satellite Satellite -581 891 373 1 799 4152 41 0 17 chrUextra 28052195 28052721 -951935 - R1_DM LINE R1 -4251 1105 589 1 799 584 61 0 24 chrUextra 28052821 28052905 -951751 - LSU-rRNA_Dme rRNA rRNA -3818 82 1 1 799 21 71 0 0 chrUextra 28052917 28052959 -951697 + AT_rich Low_complexity Low_complexity 1 42 0 1 799 34 24 0 0 chrUextra 28053195 28053236 -951420 + AT_rich Low_complexity Low_complexity 1 41 0 1 799 2749 91 19 10 chrUextra 28053459 28053981 -950675 - DMSAT6 Satellite Satellite 0 527 1 1 799 1224 91 0 4 chrUextra 28054083 28054348 -950308 + (TAGA)n Simple_repeat Simple_repeat 1 264 0 1 799 1059 94 0 0 chrUextra 28054354 28054534 -950122 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 799 441 104 0 0 chrUextra 28054534 28054610 -950046 + (TAGA)n Simple_repeat Simple_repeat 3 79 0 1 799 4855 4 0 2 chrUextra 28054713 28055243 -949413 + R1_DM LINE R1 4464 4992 -364 1 799 4911 2 2 0 chrUextra 28055973 28056503 -948153 - SSU-rRNA_Dme rRNA rRNA -1037 958 428 1 799 1620 14 0 0 chrUextra 28056603 28057102 -947554 + (TCTA)n Simple_repeat Simple_repeat 1 499 0 1 799 270 0 0 0 chrUextra 28057103 28057133 -947523 + (CTAG)n Simple_repeat Simple_repeat 3 32 0 1 799 2673 84 11 25 chrUextra 28057233 28057760 -946896 + DMSAT6 Satellite Satellite 1 519 -251 1 799 2375 89 35 35 chrUextra 28057863 28058390 -946266 - DMSAT6 Satellite Satellite -24 526 1 1 799 2500 72 2 51 chrUextra 28059763 28060250 -944406 - DMSAT6 Satellite Satellite -3 467 5 1 799 1388 6 0 18 chrUextra 28060395 28060560 -944096 - NTS_DM Other Other -78 162 1 1 799 1969 4 17 13 chrUextra 28060560 28060799 -943857 - NTS_DM Other Other 0 240 1 1 799 794 9 35 26 chrUextra 28060799 28060913 -943743 - NTS_DM Other Other 0 240 126 1 799 980 22 0 82 chrUextra 28061013 28061207 -943449 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 1 799 396 184 11 54 chrUextra 28061207 28061236 -943420 + polypurine Low_complexity Low_complexity 1 30 0 1 799 824 23 0 83 chrUextra 28061236 28061428 -943228 + (GAGAA)n Simple_repeat Simple_repeat 3 178 0 1 799 396 184 11 54 chrUextra 28061428 28061490 -943166 + polypurine Low_complexity Low_complexity 31 88 0 1 799 444 19 0 0 chrUextra 28061490 28061543 -943113 + (ATAAG)n Simple_repeat Simple_repeat 1 53 0 1 799 2522 108 10 64 chrUextra 28061650 28062147 -942509 + DMSAT6 Satellite Satellite 1 470 0 1 799 756 77 0 0 chrUextra 28062273 28062390 -942266 + (GAGAA)n Simple_repeat Simple_repeat 1 117 0 1 799 1521 34 0 5 chrUextra 28062390 28062803 -941853 + (TATAA)n Simple_repeat Simple_repeat 1 411 0 1 799 1160 167 17 7 chrUextra 28063533 28063580 -941076 + SAR_DM Satellite Satellite 1 60 -1014 1 799 922 51 0 0 chrUextra 28063580 28063697 -940959 - ARS406_DM Unknown Unknown -164 189 73 1 799 1160 167 17 7 chrUextra 28063697 28064063 -940593 + SAR_DM Satellite Satellite 61 535 -539 1 799 2205 28 225 0 chrUextra 28064337 28064693 -939963 + FW_DM LINE Jockey 3120 3555 -1137 1 799 4925 0 2 2 chrUextra 28064793 28065323 -939333 - LSU-rRNA_Dme rRNA rRNA -368 3532 3003 1 799 716 0 0 0 chrUextra 28065423 28065499 -939157 - NTS_DM Other Other -164 76 1 1 799 1866 21 17 17 chrUextra 28065499 28065739 -938917 - NTS_DM Other Other 0 240 1 1 799 1529 29 19 19 chrUextra 28065740 28065948 -938708 - NTS_DM Other Other -1 239 32 1 799 251 164 115 0 chrUextra 28066095 28066156 -938500 + PROTOP DNA P 848 915 -3565 1 799 464 176 390 5 chrUextra 28066155 28066365 -938291 + PROTOP DNA P 3959 4248 -232 1 799 279 277 28 16 chrUextra 28066451 28066579 -938077 - MICROPIA_I LTR Gypsy -626 3850 3774 1 799 804 50 0 0 chrUextra 28066682 28066782 -937874 + HETA LINE telomeric 2067 2166 -3915 1 799 3076 102 16 0 chrUextra 28066780 28067211 -937445 + HETA LINE telomeric 2429 2866 -3215 1 799 4840 0 0 2 chrUextra 28067940 28068469 -936187 + LSU-rRNA_Dme rRNA rRNA 599 1126 -2774 1 799 4379 14 0 0 chrUextra 28068569 28069051 -935605 - LSU-rRNA_Dme rRNA rRNA -1631 2269 1788 1 799 4774 6 2 2 chrUextra 28069198 28069727 -934929 - LSU-rRNA_Dme rRNA rRNA -2591 1309 781 1 799 4652 8 4 0 chrUextra 28069827 28070348 -934308 + Invader4_I LTR Gypsy 1499 2021 -392 1 799 833 9 34 26 chrUextra 28070456 28070573 -934083 + NTS_DM Other Other 123 240 0 1 799 1365 12 0 18 chrUextra 28070573 28070738 -933918 + NTS_DM Other Other 1 162 -78 1 799 507 131 36 0 chrUextra 28070848 28070932 -933724 + NTS_DM Other Other 4 90 -150 1 799 343 143 136 0 chrUextra 28071087 28071241 -933415 + (CAGA)n Simple_repeat Simple_repeat 4 178 0 1 799 1627 174 17 10 chrUextra 28071722 28071766 -932890 - SAR_DM Satellite Satellite -426 523 462 1 799 1107 82 0 0 chrUextra 28071766 28071924 -932732 + ARS406_DM Unknown Unknown 1 158 -195 1 799 1627 174 17 10 chrUextra 28071924 28072242 -932414 - SAR_DM Satellite Satellite -426 461 1 1 799 37 23 0 0 chrUextra 28072466 28072510 -932146 + AT_rich Low_complexity Low_complexity 1 44 0 1 799 4733 2 6 6 chrUextra 28072972 28073501 -931155 + LSU-rRNA_Dme rRNA rRNA 1202 1730 -2170 1 799 1503 17 0 0 chrUextra 28073619 28073797 -930859 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 799 1269 46 17 0 chrUextra 28073820 28073993 -930663 + (TTCTC)n Simple_repeat Simple_repeat 5 180 0 1 799 600 107 53 15 chrUextra 28073997 28074130 -930526 + CT-rich Low_complexity Low_complexity 2 139 0 1 799 1986 0 17 13 chrUextra 28074270 28074509 -930147 + NTS_DM Other Other 1 240 0 1 799 1940 8 17 13 chrUextra 28074509 28074747 -929909 + NTS_DM Other Other 1 239 -1 1 799 2461 181 10 33 chrUextra 28074863 28075994 -928662 - DMSAT6 Satellite Satellite -30 1104 1 1 799 2616 79 23 15 chrUextra 28076120 28076646 -928010 + DMSAT6 Satellite Satellite 1 529 -3 1 799 1823 5 0 0 chrUextra 28076748 28076954 -927702 - NTS_DM Other Other -34 206 1 1 799 1926 0 17 21 chrUextra 28076954 28077195 -927461 - NTS_DM Other Other 0 240 1 1 799 563 0 50 38 chrUextra 28077195 28077275 -927381 - NTS_DM Other Other 0 240 160 1 799 388 364 35 6 chrUextra 28077377 28077551 -927105 + GA-rich Low_complexity Low_complexity 1 179 0 1 799 3871 21 0 0 chrUextra 28078003 28078436 -926220 + G2_DM LINE Jockey 860 1292 -1810 1 799 600 56 22 22 chrUextra 28078440 28078531 -926125 - PROTOP DNA P -221 4259 4169 1 799 2488 107 50 8 chrUextra 28078633 28079152 -925504 - DMSAT6 Satellite Satellite -287 541 1 1 799 2597 113 18 26 chrUextra 28079279 28079787 -924869 + DMSAT6 Satellite Satellite 1 503 0 1 799 3487 67 0 23 chrUextra 28079894 28080414 -924242 + NOMAD_I LTR Gypsy 5350 5857 -715 1 799 813 11 0 0 chrUextra 28080515 28080609 -924047 + (TTCTC)n Simple_repeat Simple_repeat 5 98 0 1 799 2629 102 9 32 chrUextra 28081143 28081670 -922986 - DMSAT6 Satellite Satellite -6 514 1 1 799 2498 111 76 40 chrUextra 28081771 28082299 -922357 - STALKER4_I LTR Gypsy -5281 1249 703 1 799 2576 109 18 10 chrUextra 28082399 28082903 -921753 - DMSAT6 Satellite Satellite -287 508 1 1 799 2310 179 11 13 chrUextra 28083027 28083552 -921104 - SAR_DM Satellite Satellite -667 805 282 1 799 2558 71 51 13 chrUextra 28083655 28084183 -920473 - DMSAT6 Satellite Satellite -107 548 1 1 799 4728 6 4 2 chrUextra 28084283 28084811 -919845 + R1_DM LINE R1 3452 3980 -1376 1 799 1620 4 2 2 chrUextra 28084913 28085439 -919217 + (CATCT)n Simple_repeat Simple_repeat 1 526 0 1 799 2573 95 20 20 chrUextra 28085562 28086067 -918589 + DMSAT6 Satellite Satellite 1 505 0 1 799 2271 192 10 13 chrUextra 28086172 28086695 -917961 - SAR_DM Satellite Satellite -425 1047 527 1 799 2547 175 11 8 chrUextra 28086797 28087322 -917334 + SAR_DM Satellite Satellite 278 804 -668 1 799 2549 92 17 44 chrUextra 28087422 28087943 -916713 - DMSAT6 Satellite Satellite -156 506 1 1 799 507 294 51 51 chrUextra 28088756 28088959 -915697 - DM297_I LTR Gypsy -3176 2991 2643 1 799 1609 23 19 0 chrUextra 28088959 28089173 -915483 - TLD2 Unknown Unknown 0 218 1 1 799 507 294 51 51 chrUextra 28089173 28089202 -915454 - DM297_I LTR Gypsy -3176 2642 2590 1 799 396 247 149 57 chrUextra 28089935 28090197 -914459 - QUASIMODO_I LTR Gypsy -1237 4823 4538 1 799 192 40 0 0 chrUextra 28090243 28090268 -914388 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 799 1634 17 0 0 chrUextra 28090277 28090457 -914199 - DMRT1B LINE R1 0 5183 5004 1 799 519 196 0 0 chrUextra 28090565 28090703 -913953 + (AATAG)n Simple_repeat Simple_repeat 2 139 0 1 799 2651 58 75 0 chrUextra 28090707 28090851 -913805 - Stalker3_LTR LTR Gypsy 0 372 229 1 799 210 37 0 0 chrUextra 28090851 28090878 -913778 + (CTTAT)n Simple_repeat Simple_repeat 3 29 0 1 799 2651 58 75 0 chrUextra 28090878 28091079 -913577 - Stalker3_LTR LTR Gypsy -144 228 2 1 799 2495 95 29 8 chrUextra 28091189 28091711 -912945 + DMSAT6 Satellite Satellite 1 533 0 1 799 1553 0 0 6 chrUextra 28091811 28091989 -912667 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 1 799 2453 117 31 14 chrUextra 28092444 28092963 -911693 + DMSAT6 Satellite Satellite 1 527 -3 1 799 2521 172 8 10 chrUextra 28093069 28093591 -911065 + SAR_DM Satellite Satellite 536 1056 -416 1 799 1620 4 0 0 chrUextra 28093692 28093934 -910722 + (GAGAA)n Simple_repeat Simple_repeat 1 242 0 1 799 204 120 60 0 chrUextra 28094319 28094369 -910287 + CT-rich Low_complexity Low_complexity 5 57 0 1 799 222 105 0 0 chrUextra 28094389 28094427 -910229 + (CGAGA)n Simple_repeat Simple_repeat 3 40 0 1 799 1587 7 0 0 chrUextra 28094428 28094846 -909810 + (GAGAA)n Simple_repeat Simple_repeat 1 418 0 1 799 1494 55 40 30 chrUextra 28094946 28095473 -909183 + (TCTTG)n Simple_repeat Simple_repeat 1 532 0 1 799 1995 166 51 6 chrUextra 28095584 28096095 -908561 + SAR_DM Satellite Satellite 1 534 -677 1 799 666 0 0 0 chrUextra 28096200 28096274 -908382 + (GAGAA)n Simple_repeat Simple_repeat 2 75 0 1 799 2241 174 13 8 chrUextra 28096881 28097351 -907305 + SAR_DM Satellite Satellite 399 870 -602 1 799 605 47 0 12 chrUextra 28097893 28097979 -906677 + (TTCTC)n Simple_repeat Simple_repeat 2 86 0 1 799 979 284 14 36 chrUextra 28098079 28098444 -906212 - ROVER-I_DM LTR Gypsy -5378 1206 850 1 799 1070 50 0 0 chrUextra 28098465 28098605 -906051 - LOOPER1_DM DNA PiggyBac -1529 352 213 1 799 306 0 0 0 chrUextra 28099331 28099365 -905291 + (GAGAA)n Simple_repeat Simple_repeat 2 35 0 1 799 4863 4 2 2 chrUextra 28099957 28100483 -904173 - LSU-rRNA_Dme rRNA rRNA -229 3671 3146 1 799 576 0 49 37 chrUextra 28100583 28100665 -903991 + NTS_DM Other Other 158 240 0 1 799 1388 6 0 18 chrUextra 28100665 28100830 -903826 + NTS_DM Other Other 1 162 -78 1 799 496 162 51 59 chrUextra 28100940 28101058 -903598 + NTS_DM Other Other 4 120 -120 1 799 1881 0 18 13 chrUextra 28101209 28101437 -903219 + NTS_DM Other Other 12 240 0 1 799 1956 0 17 17 chrUextra 28101437 28101677 -902979 + NTS_DM Other Other 1 240 0 1 799 520 17 0 0 chrUextra 28101677 28101735 -902921 + NTS_DM Other Other 1 58 -182 1 799 2395 179 15 11 chrUextra 28102462 28102987 -901669 + SAR_DM Satellite Satellite 268 794 -678 1 799 4138 24 0 6 chrUextra 28103099 28103612 -901044 - NOMAD_I LTR Gypsy -805 5767 5258 1 799 22 111 0 0 chrUextra 28103769 28103868 -900788 + AT_rich Low_complexity Low_complexity 1 99 0 1 799 26 118 0 0 chrUextra 28103950 28104102 -900554 + AT_rich Low_complexity Low_complexity 1 152 0 1 799 1817 0 13 22 chrUextra 28104337 28104563 -900093 - NTS_DM Other Other -16 224 1 1 799 1958 8 17 13 chrUextra 28104563 28104802 -899854 - NTS_DM Other Other 0 240 1 1 799 337 36 68 51 chrUextra 28104802 28104861 -899795 - NTS_DM Other Other 0 240 181 1 799 4441 27 2 2 chrUextra 28104962 28105487 -899169 - TABOR_I LTR Gypsy -2778 3558 3034 1 799 4874 0 2 2 chrUextra 28105587 28106112 -898544 + SSU-rRNA_Dme rRNA rRNA 1468 1992 -3 1 799 2460 187 15 4 chrUextra 28106212 28106732 -897924 + SAR_DM Satellite Satellite 354 879 -593 1 799 513 0 0 0 chrUextra 28106837 28106894 -897762 + (TTCTC)n Simple_repeat Simple_repeat 2 58 0 1 799 1620 5 0 0 chrUextra 28106919 28107362 -897294 + (GAGAA)n Simple_repeat Simple_repeat 1 443 0 1 799 24 53 0 0 chrUextra 28108721 28108759 -895897 + AT_rich Low_complexity Low_complexity 1 38 0 1 799 922 9 0 27 chrUextra 28108785 28108897 -895759 + NTS_DM Other Other 25 133 -107 1 799 1332 18 0 6 chrUextra 28108897 28109062 -895594 + NTS_DM Other Other 38 201 -39 1 799 21 57 0 0 chrUextra 28109062 28109097 -895559 + AT_rich Low_complexity Low_complexity 1 35 0 1 799 890 9 9 27 chrUextra 28109123 28109234 -895422 + NTS_DM Other Other 25 133 -107 1 799 34 24 0 0 chrUextra 28109396 28109437 -895219 + AT_rich Low_complexity Low_complexity 1 41 0 1 799 2713 89 14 24 chrUextra 28109977 28110485 -894171 + DMSAT6 Satellite Satellite 1 502 0 1 799 4338 9 17 2 chrUextra 28111834 28112358 -892298 + MDG1_I LTR Gypsy 859 1390 -5206 1 799 2499 82 23 31 chrUextra 28112461 28112981 -891675 + DMSAT6 Satellite Satellite 1 515 -13 1 799 364 217 106 0 chrUextra 28113157 28113318 -891338 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 799 360 151 125 6 chrUextra 28113370 28113530 -891126 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 1 799 3059 31 0 6 chrUextra 28113706 28114059 -890597 + R1_DM LINE R1 5006 5356 0 1 799 996 73 7 7 chrUextra 28114092 28114230 -890426 + R1_DM LINE R1 1 138 -5218 1 799 4641 2 2 0 chrUextra 28114330 28114854 -889802 + LSU-rRNA_Dme rRNA rRNA 382 906 -2994 1 799 319 141 133 0 chrUextra 28116214 28116349 -888307 + (TTTG)n Simple_repeat Simple_repeat 3 155 0 1 799 540 23 0 137 chrUextra 28116287 28116492 -888164 + T-rich Low_complexity Low_complexity 2 178 0 1 799 230 121 0 147 chrUextra 28116511 28116715 -887941 + T-rich Low_complexity Low_complexity 5 178 0 1 799 4632 8 2 6 chrUextra 28116826 28117349 -887307 - LSU-rRNA_Dme rRNA rRNA -2284 1616 1096 1 799 2303 186 10 15 chrUextra 28118072 28118595 -886061 - SAR_DM Satellite Satellite -470 1002 483 1 799 2045 0 4 0 chrUextra 28118695 28118951 -885705 + HMSBEAGLE_I LTR Gypsy 531 787 -5742 1 799 974 29 52 12 chrUextra 28118965 28119137 -885519 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 799 725 0 0 0 chrUextra 28119137 28119218 -885438 + HMSBEAGLE_I LTR Gypsy 969 1049 -5480 1 799 4770 4 0 2 chrUextra 28119318 28119841 -884815 - R1_DM LINE R1 -1742 3614 3093 1 799 2448 105 19 18 chrUextra 28119950 28120464 -884192 + DMSAT6 Satellite Satellite 1 514 0 1 799 1620 7 0 0 chrUextra 28121187 28121473 -883183 + (TAGA)n Simple_repeat Simple_repeat 1 286 0 1 799 1620 0 0 0 chrUextra 28121484 28121706 -882950 + (TAGA)n Simple_repeat Simple_repeat 1 222 0 1 799 2600 88 23 19 chrUextra 28121809 28122331 -882325 + DMSAT6 Satellite Satellite 1 523 -85 1 799 4819 0 0 2 chrUextra 28122431 28122953 -881703 + DOC LINE Jockey 3171 3691 -1034 1 799 794 109 13 0 chrUextra 28123053 28123076 -881580 + (ACTAG)n Simple_repeat Simple_repeat 3 25 0 1 799 1041 96 0 0 chrUextra 28123076 28123254 -881402 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 799 794 109 13 0 chrUextra 28123254 28123386 -881270 + (ACTAG)n Simple_repeat Simple_repeat 4 137 0 1 799 1041 96 0 0 chrUextra 28123386 28123564 -881092 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 799 1345 22 0 37 chrUextra 28123691 28123878 -880778 + (C)n Simple_repeat Simple_repeat 1 180 0 1 799 1389 24 0 0 chrUextra 28123894 28124063 -880593 + (C)n Simple_repeat Simple_repeat 1 169 0 1 799 441 33 0 126 chrUextra 28124071 28124174 -880482 + C-rich Low_complexity Low_complexity 1 90 0 1 799 288 0 0 0 chrUextra 28124380 28124412 -880244 - Stalker3_LTR LTR Gypsy -340 32 1 1 799 3369 44 0 0 chrUextra 28124412 28124819 -879837 - ROO_I LTR Pao -5206 3050 2644 1 799 1063 102 11 6 chrUextra 28124919 28125096 -879560 + (TATTG)n Simple_repeat Simple_repeat 2 179 0 1 799 1432 14 0 38 chrUextra 28125096 28125385 -879271 + (TTATA)n Simple_repeat Simple_repeat 1 278 0 1 799 387 60 0 0 chrUextra 28125391 28125441 -879215 + (TATTG)n Simple_repeat Simple_repeat 3 52 0 1 799 1520 10 0 21 chrUextra 28126163 28126685 -877971 + (TCTA)n Simple_repeat Simple_repeat 1 510 0 1 799 2200 231 10 6 chrUextra 28126787 28127288 -877368 + IDEFIX_I LTR Gypsy 1611 2113 -3515 1 799 2526 115 12 15 chrUextra 28127407 28127929 -876727 - DMSAT6 Satellite Satellite -9 520 1 1 799 669 0 0 0 chrUextra 28128650 28128721 -875935 - NTS_DM Other Other -169 71 1 1 799 1945 4 17 17 chrUextra 28128721 28128961 -875695 - NTS_DM Other Other 0 240 1 1 799 1535 29 19 19 chrUextra 28128961 28129171 -875485 - NTS_DM Other Other 0 240 31 1 799 2148 169 31 23 chrUextra 28129277 28129792 -874864 + SAR_DM Satellite Satellite 456 974 -498 1 799 1551 6 0 0 chrUextra 28130519 28130695 -873961 + (TCTTG)n Simple_repeat Simple_repeat 4 179 0 1 799 2367 91 19 39 chrUextra 28131134 28131648 -873008 - DMSAT6 Satellite Satellite -406 503 1 1 799 386 0 0 164 chrUextra 28132042 28132256 -872400 + (ACATG)n Simple_repeat Simple_repeat 2 180 0 1 799 408 121 9 114 chrUextra 28133616 28134065 -870591 + GA-rich Low_complexity Low_complexity 1 401 0 1 799 4714 11 0 2 chrUextra 28134236 28134756 -869900 - LSU-rRNA_Dme rRNA rRNA -1136 2764 2246 1 799 1599 28 0 0 chrUextra 28136107 28136616 -868040 + (TTATA)n Simple_repeat Simple_repeat 1 509 0 1 799 1248 51 14 11 chrUextra 28136942 28137224 -867432 + (TTCTC)n Simple_repeat Simple_repeat 1 282 0 1 799 2227 100 31 56 chrUextra 28137336 28137856 -866800 + DMSAT6 Satellite Satellite 1 507 0 1 799 1620 0 0 0 chrUextra 28137961 28138210 -866446 + (TTGTG)n Simple_repeat Simple_repeat 1 249 0 1 799 2414 8 0 0 chrUextra 28138210 28138476 -866180 + STALKER4_LTR LTR Gypsy 4 269 -133 1 799 58 15 0 0 chrUextra 28139274 28139339 -865317 + AT_rich Low_complexity Low_complexity 1 65 0 1 799 28 48 0 0 chrUextra 28139831 28139873 -864783 + AT_rich Low_complexity Low_complexity 1 42 0 1 799 532 119 36 0 chrUextra 28140146 28140230 -864426 - NTS_DM Other Other -150 90 4 1 799 230 189 66 26 chrUextra 28140251 28140327 -864329 - NTS_DM Other Other -17 223 145 1 799 888 10 0 0 chrUextra 28140436 28140537 -864119 + (CAATA)n Simple_repeat Simple_repeat 4 104 0 1 799 532 119 36 0 chrUextra 28141104 28141188 -863468 - NTS_DM Other Other -150 90 4 1 799 1388 6 0 18 chrUextra 28141298 28141463 -863193 - NTS_DM Other Other -78 162 1 1 799 777 9 36 27 chrUextra 28141464 28141575 -863081 - NTS_DM Other Other -1 239 128 1 799 2196 122 25 27 chrUextra 28141675 28142190 -862466 - DMSAT6 Satellite Satellite -118 514 1 1 799 1620 0 0 0 chrUextra 28142520 28142809 -861847 + (CAAGA)n Simple_repeat Simple_repeat 1 289 0 1 799 655 20 39 39 chrUextra 28142913 28143015 -861641 + NTS_DM Other Other 139 240 0 1 799 1858 21 17 17 chrUextra 28143015 28143255 -861401 + NTS_DM Other Other 1 240 0 1 799 1373 45 0 6 chrUextra 28143255 28143432 -861224 + NTS_DM Other Other 1 176 -64 1 799 438 36 0 0 chrUextra 28144151 28144207 -860449 + (TTCTC)n Simple_repeat Simple_repeat 2 57 0 1 799 1371 48 0 0 chrUextra 28144770 28144979 -859677 + (TAGA)n Simple_repeat Simple_repeat 1 209 0 1 799 1470 57 0 0 chrUextra 28145004 28145287 -859369 + (TAGA)n Simple_repeat Simple_repeat 1 283 0 1 799 1824 21 17 17 chrUextra 28146008 28146245 -858411 + NTS_DM Other Other 4 240 0 1 799 1975 4 17 13 chrUextra 28146245 28146484 -858172 + NTS_DM Other Other 1 240 0 1 799 386 23 0 0 chrUextra 28146484 28146527 -858129 + NTS_DM Other Other 1 43 -197 1 799 21 95 0 0 chrUextra 28146876 28146939 -857717 + AT_rich Low_complexity Low_complexity 1 63 0 1 799 1782 5 0 0 chrUextra 28146951 28147146 -857510 + LSU-rRNA_Dme rRNA rRNA 1 195 -3705 1 799 4190 0 0 0 chrUextra 28147246 28147723 -856933 + ROO_I LTR Pao 100 576 -7680 1 799 270 0 0 0 chrUextra 28147723 28147753 -856903 + (A)n Simple_repeat Simple_repeat 1 30 0 1 799 2322 176 16 12 chrUextra 28147865 28148382 -856274 + SAR_DM Satellite Satellite 467 985 -487 1 799 1757 45 18 5 chrUextra 28148484 28148706 -855950 + ACCORD2_I LTR Gypsy 5835 6059 -1153 1 799 1196 30 0 0 chrUextra 28148732 28148867 -855789 + ACCORD2_I LTR Gypsy 7077 7211 -1 1 799 1112 30 0 29 chrUextra 28148865 28149003 -855653 + ACCORD2_LTR LTR Gypsy 1 134 -81 1 799 1329 13 0 0 chrUextra 28149107 28149262 -855394 + (GAGAA)n Simple_repeat Simple_repeat 3 157 0 1 799 2331 170 16 18 chrUextra 28149725 28150240 -854416 + SAR_DM Satellite Satellite 481 994 -478 1 799 2322 93 21 60 chrUextra 28150342 28150860 -853796 + DMSAT6 Satellite Satellite 1 497 -147 1 799 2644 164 12 8 chrUextra 28150960 28151478 -853178 - SAR_DM Satellite Satellite -554 918 399 1 799 702 290 34 31 chrUextra 28151620 28151767 -852889 - Gypsy4_I LTR Gypsy -3176 2991 2712 1 799 1569 28 24 0 chrUextra 28151767 28151980 -852676 - TLD2 Unknown Unknown 0 218 1 1 799 702 290 34 31 chrUextra 28151980 28152078 -852578 - Gypsy4_I LTR Gypsy -3176 2711 2521 1 799 4393 21 0 4 chrUextra 28152198 28152717 -851939 + STALKER4_I LTR Gypsy 2295 2811 -3719 1 799 433 60 0 138 chrUextra 28152817 28153101 -851555 + T-rich Low_complexity Low_complexity 1 244 0 1 799 531 28 0 137 chrUextra 28153128 28153333 -851323 + T-rich Low_complexity Low_complexity 4 180 0 1 799 1547 0 0 0 chrUextra 28153438 28153604 -851052 - TABOR_LTR LTR Gypsy -340 166 1 1 799 1824 72 2 31 chrUextra 28153602 28153953 -850703 - TABOR_I LTR Gypsy 0 6336 5877 1 799 1339 18 0 6 chrUextra 28154053 28154218 -850438 - NTS_DM Other Other -39 201 38 1 799 890 9 9 27 chrUextra 28154218 28154329 -850327 - NTS_DM Other Other -107 133 25 1 799 21 57 0 0 chrUextra 28154355 28154390 -850266 + AT_rich Low_complexity Low_complexity 1 35 0 1 799 1309 24 0 6 chrUextra 28154390 28154555 -850101 - NTS_DM Other Other -39 201 38 1 799 298 194 0 15 chrUextra 28154671 28154739 -849917 - HETA LINE telomeric -386 5695 5629 1 799 297 70 35 17 chrUextra 28154739 28154797 -849859 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1 799 338 220 72 18 chrUextra 28154810 28154915 -849741 - Gypsy_LTR LTR Gypsy -20 462 352 1 799 1387 124 33 52 chrUextra 28154915 28155189 -849467 - Stalker2_LTR LTR Gypsy -3 421 171 1 799 4480 12 2 8 chrUextra 28155289 28155807 -848849 + DOC2_DM LINE Jockey 2992 3506 -1287 1 799 2368 122 23 34 chrUextra 28155931 28156406 -848250 - DMSAT6 Satellite Satellite 0 470 1 1 799 3310 21 5 3 chrUextra 28156525 28157043 -847613 + DM297_I LTR Gypsy 968 1402 -4765 1 799 1620 5 0 2 chrUextra 28157143 28157574 -847082 + (CTATT)n Simple_repeat Simple_repeat 1 430 0 1 799 582 28 0 0 chrUextra 28157586 28157658 -846998 + (CTATT)n Simple_repeat Simple_repeat 3 74 0 1 799 266 196 0 19 chrUextra 28157841 28157893 -846763 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 799 266 196 0 19 chrUextra 28157933 28157985 -846671 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 799 277 176 0 19 chrUextra 28158016 28158068 -846588 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 799 22 56 0 0 chrUextra 28158081 28158117 -846539 + AT_rich Low_complexity Low_complexity 1 36 0 1 799 928 9 0 27 chrUextra 28158143 28158255 -846401 + NTS_DM Other Other 25 133 -107 1 799 4559 16 0 2 chrUextra 28158380 28158897 -845759 - R1_DM LINE R1 -208 5148 4633 1 799 4497 4 2 10 chrUextra 28158997 28159515 -845141 - NOMAD_I LTR Gypsy -399 6173 5660 1 799 675 115 0 0 chrUextra 28159615 28159745 -844911 + (TCTA)n Simple_repeat Simple_repeat 3 132 0 1 799 1401 45 0 0 chrUextra 28159763 28160128 -844528 + (TCTA)n Simple_repeat Simple_repeat 1 365 0 1 799 412 59 0 0 chrUextra 28160233 28160284 -844372 + NINJA_I LTR Pao 3928 3978 -2033 1 799 2651 88 8 68 chrUextra 28160861 28161361 -843295 + DMSAT6 Satellite Satellite 1 470 0 1 799 1893 167 8 11 chrUextra 28161469 28161506 -843150 + SAR_DM Satellite Satellite 1 45 -1028 1 799 818 30 0 10 chrUextra 28161506 28161607 -843049 - ARS406_DM Unknown Unknown -164 189 90 1 799 1893 167 8 11 chrUextra 28161607 28161987 -842669 + SAR_DM Satellite Satellite 46 515 -558 1 799 266 196 0 19 chrUextra 28162110 28162162 -842494 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 799 266 196 0 19 chrUextra 28162202 28162254 -842402 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 799 2099 32 4 0 chrUextra 28162357 28162605 -842051 - LSU-rRNA_Dme rRNA rRNA 0 3900 3652 1 799 1647 34 0 10 chrUextra 28162709 28162917 -841739 - NTS_DM Other Other -34 206 1 1 799 1849 25 17 17 chrUextra 28162917 28163157 -841499 - NTS_DM Other Other 0 240 1 1 799 377 63 61 45 chrUextra 28163157 28163223 -841433 - NTS_DM Other Other 0 240 174 1 799 4778 2 0 2 chrUextra 28163323 28163841 -840815 + LSU-rRNA_Dme rRNA rRNA 2024 2540 -1360 1 799 4548 4 6 6 chrUextra 28163941 28164456 -840200 + LSU-rRNA_Dme rRNA rRNA 1277 1791 -2109 1 799 1620 5 0 0 chrUextra 28164666 28165075 -839581 + (TTCTC)n Simple_repeat Simple_repeat 1 409 0 1 799 2555 161 4 16 chrUextra 28165175 28165692 -838964 - SAR_DM Satellite Satellite -620 852 342 1 799 2623 96 14 49 chrUextra 28165794 28166309 -838347 + DMSAT6 Satellite Satellite 1 496 -357 1 799 2499 90 20 14 chrUextra 28166418 28166926 -837730 - DMSAT6 Satellite Satellite -7 510 1 1 799 464 52 0 0 chrUextra 28167026 28167084 -837572 - STALKER4_LTR LTR Gypsy -336 66 9 1 799 3041 72 11 5 chrUextra 28167094 28167542 -837114 - STALKER4_I LTR Gypsy 0 6530 6080 1 799 4687 6 2 4 chrUextra 28168260 28168777 -835879 + SSU-rRNA_Dme rRNA rRNA 871 1386 -609 1 799 234 179 0 0 chrUextra 28168882 28168938 -835718 + (CATAA)n Simple_repeat Simple_repeat 2 57 0 1 799 3023 89 32 2 chrUextra 28169494 28170010 -834646 + STALKER4_I LTR Gypsy 4902 5830 -1067 1 799 1187 95 77 41 chrUextra 28171343 28171563 -833093 + ACCORD2_I LTR Gypsy 1643 1870 -5342 1 799 2114 12 4 8 chrUextra 28171573 28171826 -832830 - IDEFIX_LTR LTR Gypsy 0 594 343 1 799 236 132 0 0 chrUextra 28171820 28171858 -832798 - IDEFIX_I LTR Gypsy -334 5294 5257 1 799 1578 7 0 0 chrUextra 28172183 28172475 -832181 + (TTGTG)n Simple_repeat Simple_repeat 1 292 0 1 799 1472 15 25 20 chrUextra 28172575 28172774 -831882 + NTS_DM Other Other 41 240 0 1 799 1880 17 17 17 chrUextra 28172774 28173014 -831642 + NTS_DM Other Other 1 240 0 1 799 708 13 0 0 chrUextra 28173014 28173091 -831565 + NTS_DM Other Other 1 77 -163 1 799 460 303 0 6 chrUextra 28173262 28173492 -831164 + (CAGAGA)n Simple_repeat Simple_repeat 1 228 0 1 799 388 223 16 74 chrUextra 28173516 28173705 -830951 + GA-rich Low_complexity Low_complexity 1 178 0 1 799 1342 46 0 8 chrUextra 28173807 28174200 -830456 + (CACAA)n Simple_repeat Simple_repeat 1 389 0 1 799 989 50 0 0 chrUextra 28174203 28174323 -830333 - T412LTR LTR LTR 0 481 362 1 799 2526 175 14 53 chrUextra 28174423 28175555 -829101 + DMSAT6 Satellite Satellite 1 1087 0 1 799 2516 93 8 83 chrUextra 28175667 28176171 -828485 - DMSAT6 Satellite Satellite 0 470 5 1 799 4576 6 2 4 chrUextra 28176271 28176787 -827869 - R1_DM LINE R1 -1442 3914 3400 1 799 1332 18 0 6 chrUextra 28176951 28177116 -827540 - NTS_DM Other Other -39 201 38 1 799 928 9 0 27 chrUextra 28177116 28177228 -827428 - NTS_DM Other Other -107 133 25 1 799 22 56 0 0 chrUextra 28177254 28177290 -827366 + AT_rich Low_complexity Low_complexity 1 36 0 1 799 247 176 0 38 chrUextra 28177303 28177356 -827300 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 799 1646 26 0 0 chrUextra 28177503 28177698 -826958 - FW_DM LINE Jockey -1430 3262 3068 1 799 2536 0 0 7 chrUextra 28177718 28178019 -826637 - DOC LINE Jockey 0 4725 4427 1 799 2509 108 14 45 chrUextra 28178126 28178611 -826045 + DMSAT6 Satellite Satellite 1 470 0 1 799 247 53 87 87 chrUextra 28178774 28178865 -825791 + (TCGTG)n Simple_repeat Simple_repeat 1 92 0 1 799 1207 33 0 32 chrUextra 28178865 28179051 -825605 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 799 247 53 87 87 chrUextra 28179051 28179062 -825594 + (TCGTG)n Simple_repeat Simple_repeat 5 15 0 1 799 956 111 0 6 chrUextra 28179062 28179243 -825413 + (CATGT)n Simple_repeat Simple_repeat 1 180 0 1 799 2722 80 231 51 chrUextra 28179351 28179867 -824789 + DOC LINE Jockey 1886 2494 -2231 1 799 630 160 0 0 chrUextra 28179967 28180136 -824520 + (CA)n Simple_repeat Simple_repeat 2 170 0 1 99 2898 0 0 3 chrUextra 28180166 28180483 -824173 - STALKER4_LTR LTR Gypsy 0 402 87 1 800 4221 0 2 48 chrUextra 28180583 28181099 -823557 + LSU-rRNA_Dme rRNA rRNA 157 648 -3252 1 800 4437 8 0 6 chrUextra 28181199 28181715 -822941 + ROO_I LTR Pao 894 1406 -6850 1 800 2357 100 23 47 chrUextra 28181815 28182329 -822327 - DMSAT6 Satellite Satellite -122 502 1 1 800 4698 4 0 2 chrUextra 28182431 28182947 -821709 - R1_DM LINE R1 -308 5048 4534 1 800 2834 84 14 8 chrUextra 28183047 28183562 -821094 + DMSAT6 Satellite Satellite 1 517 0 1 800 2549 163 18 6 chrUextra 28183670 28184176 -820480 + SAR_DM Satellite Satellite 326 837 -635 1 800 1089 0 0 0 chrUextra 28184892 28185013 -819643 + (CACAA)n Simple_repeat Simple_repeat 2 122 0 1 800 3420 33 0 0 chrUextra 28185013 28185407 -819249 - MAX_I LTR Pao -3340 4574 4181 1 800 536 161 0 0 chrUextra 28185507 28185594 -819062 - IDEFIX_I LTR Gypsy -1322 4306 4220 1 800 3729 12 2 9 chrUextra 28185598 28186022 -818634 + Gypsy12_LTR LTR Gypsy 1 421 -1915 1 800 2386 101 27 40 chrUextra 28186144 28186619 -818037 + DMSAT6 Satellite Satellite 2 470 0 1 800 2488 82 14 54 chrUextra 28186737 28187252 -817404 + DMSAT6 Satellite Satellite 1 493 -108 1 800 702 0 0 0 chrUextra 28187352 28187430 -817226 + (GAGAA)n Simple_repeat Simple_repeat 2 79 0 1 800 2439 126 16 10 chrUextra 28187967 28188482 -816174 - DMSAT6 Satellite Satellite -15 517 1 1 800 4585 2 2 0 chrUextra 28188582 28189097 -815559 - ROO_I LTR Pao -5063 3193 2678 1 800 4761 6 2 0 chrUextra 28189197 28189711 -814945 + LSU-rRNA_Dme rRNA rRNA 3145 3659 -241 1 800 370 6 0 164 chrUextra 28189845 28190111 -814545 + (TTATG)n Simple_repeat Simple_repeat 1 222 0 1 800 2575 113 19 9 chrUextra 28190455 28190920 -813736 + DMSAT6 Satellite Satellite 1 470 0 1 800 507 201 31 63 chrUextra 28191039 28191349 -813307 + PROTOP_B DNA P 350 689 -464 1 800 1620 2 0 4 chrUextra 28191653 28192158 -812498 + (TAGA)n Simple_repeat Simple_repeat 1 502 0 1 800 2338 113 12 37 chrUextra 28192267 28192781 -811875 + DMSAT6 Satellite Satellite 1 500 -85 1 800 4713 2 2 4 chrUextra 28192881 28193395 -811261 + LSU-rRNA_Dme rRNA rRNA 3179 3691 -209 1 800 3108 32 50 0 chrUextra 28193495 28193873 -810783 - PROTOP_A DNA P -708 397 1 1 800 1620 0 0 0 chrUextra 28194109 28194391 -810265 + (TCTTG)n Simple_repeat Simple_repeat 1 282 0 1 800 1898 45 11 11 chrUextra 28194723 28194992 -809664 + STALKER4_I LTR Gypsy 6262 6530 0 1 800 2134 29 0 0 chrUextra 28194993 28195237 -809419 + STALKER4_LTR LTR Gypsy 2 245 -157 1 800 866 123 8 6 chrUextra 28195951 28196464 -808192 + (TA)n Simple_repeat Simple_repeat 1 514 0 1 800 1488 28 0 10 chrUextra 28196568 28197077 -807579 + (TCTA)n Simple_repeat Simple_repeat 1 504 0 1 800 2839 66 28 2 chrUextra 28197804 28198305 -806351 + DMSAT6 Satellite Satellite 1 513 0 1 800 972 65 6 19 chrUextra 28198409 28198918 -805738 - RSP Satellite Satellite -45 502 1 1 800 2491 98 19 43 chrUextra 28199035 28199504 -805152 + DMSAT6 Satellite Satellite 10 467 -3 1 800 1687 40 17 17 chrUextra 28199631 28199861 -804795 - NTS_DM Other Other -10 230 1 1 800 1425 30 19 29 chrUextra 28199861 28200066 -804590 - NTS_DM Other Other 0 240 38 1 800 628 26 0 0 chrUextra 28200066 28200144 -804512 - NTS_DM Other Other -107 133 56 1 800 392 218 100 0 chrUextra 28200256 28200707 -803949 + (TCTTG)n Simple_repeat Simple_repeat 1 496 0 1 800 781 19 0 19 chrUextra 28201470 28201575 -803081 + (TATCG)n Simple_repeat Simple_repeat 2 104 0 1 800 1076 22 0 7 chrUextra 28201600 28201736 -802920 + (ATCTG)n Simple_repeat Simple_repeat 1 135 0 1 800 1428 28 0 0 chrUextra 28201736 28201913 -802743 + (CTTAT)n Simple_repeat Simple_repeat 4 180 0 1 800 3694 44 2 61 chrUextra 28202696 28203201 -801455 + BATUMI_I LTR Pao 2293 2767 -5196 1 800 848 10 0 0 chrUextra 28203311 28203407 -801249 - NTS_DM Other Other -107 133 38 1 800 869 19 9 27 chrUextra 28203407 28203518 -801138 - NTS_DM Other Other -107 133 25 1 800 21 57 0 0 chrUextra 28203544 28203579 -801077 + AT_rich Low_complexity Low_complexity 1 35 0 1 800 1332 18 0 6 chrUextra 28203579 28203744 -800912 - NTS_DM Other Other -39 201 38 1 800 643 13 0 0 chrUextra 28203744 28203822 -800834 - NTS_DM Other Other -107 133 56 1 800 1599 4 0 2 chrUextra 28203922 28204435 -800221 + (TAGA)n Simple_repeat Simple_repeat 1 512 0 1 800 568 48 0 12 chrUextra 28204535 28204620 -800036 + NTS_DM Other Other 118 201 -39 1 800 21 57 0 0 chrUextra 28204620 28204655 -800001 + AT_rich Low_complexity Low_complexity 1 35 0 1 800 802 46 9 27 chrUextra 28204681 28204792 -799864 + NTS_DM Other Other 25 133 -107 1 800 780 42 0 0 chrUextra 28204792 28204888 -799768 + NTS_DM Other Other 38 133 -107 1 800 1136 63 0 6 chrUextra 28204888 28205048 -799608 + NTS_DM Other Other 38 196 -44 1 800 4414 25 0 4 chrUextra 28205149 28205660 -798996 + FW_DM LINE Jockey 3141 3649 -1043 1 800 399 21 0 0 chrUextra 28206224 28206272 -798384 + (GAGAA)n Simple_repeat Simple_repeat 3 50 0 1 800 4698 8 0 0 chrUextra 28206372 28206884 -797772 + R1_DM LINE R1 4332 4843 -513 1 800 34 24 0 0 chrUextra 28207214 28207255 -797401 + AT_rich Low_complexity Low_complexity 1 41 0 1 800 202 265 0 0 chrUextra 28207627 28207676 -796980 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 800 2467 111 12 40 chrUextra 28208220 28208720 -795936 - DMSAT6 Satellite Satellite -14 485 1 1 800 1707 30 8 41 chrUextra 28208823 28209067 -795589 + Copia2_I LTR Copia 3927 4162 0 1 800 1789 5 0 0 chrUextra 28209067 28209265 -795391 + Copia2_LTR_DM LTR Copia 1 198 0 1 800 350 21 0 0 chrUextra 28209285 28209332 -795324 + Gypsy5_LTR LTR Gypsy 1 47 -383 1 800 1167 8 0 0 chrUextra 28209432 28209566 -795090 - Copia_LTR LTR Copia -142 134 1 1 800 2468 18 0 11 chrUextra 28209566 28209850 -794806 - PROTOP_A DNA P -824 281 1 1 800 354 24 0 0 chrUextra 28209850 28209892 -794764 + NINJA_I LTR Pao 5970 6011 0 1 800 316 0 0 135 chrUextra 28209892 28209944 -794712 + NINJA_LTR LTR Pao 1 45 -272 1 800 2344 124 11 25 chrUextra 28210080 28210550 -794106 + DMSAT6 Satellite Satellite 5 467 -3 1 800 3028 18 0 3 chrUextra 28210656 28211000 -793656 - LSU-rRNA_Dme rRNA rRNA -918 2982 2640 1 800 1522 18 0 0 chrUextra 28210998 28211168 -793488 - R1_DM LINE R1 0 5356 5187 1 800 2931 14 82 0 chrUextra 28211268 28211780 -792876 - QUASIMODO_I LTR Gypsy -4062 1998 1445 1 800 1833 10 0 0 chrUextra 28212492 28212691 -791965 - LSU-rRNA_Dme rRNA rRNA -1124 2776 2578 1 800 2907 3 0 0 chrUextra 28212690 28213004 -791652 - R2_DM LINE R2 0 3607 3294 1 800 2627 89 16 20 chrUextra 28213109 28213613 -791043 + DMSAT6 Satellite Satellite 1 502 0 1 800 1599 2 0 2 chrUextra 28213716 28214162 -790494 + (CACAA)n Simple_repeat Simple_repeat 1 445 0 1 800 546 30 15 0 chrUextra 28214162 28214228 -790428 - DMRT1B LINE R1 -139 5044 4978 1 800 4759 0 4 0 chrUextra 28214328 28214840 -789816 + SSU-rRNA_Dme rRNA rRNA 1481 1994 -1 1 800 678 30 0 19 chrUextra 28214940 28215043 -789613 + NTS_DM Other Other 101 201 -39 1 800 863 37 0 27 chrUextra 28215095 28215207 -789449 + NTS_DM Other Other 25 133 -107 1 800 1238 49 0 6 chrUextra 28215207 28215372 -789284 + NTS_DM Other Other 38 201 -39 1 800 1470 31 3 0 chrUextra 28215551 28215908 -788748 + (CTTAT)n Simple_repeat Simple_repeat 1 357 0 1 800 1137 15 0 0 chrUextra 28215931 28216062 -788594 + (TTTTC)n Simple_repeat Simple_repeat 1 131 0 1 800 21 95 0 0 chrUextra 28216345 28216408 -788248 + AT_rich Low_complexity Low_complexity 1 63 0 1 800 2042 5 0 0 chrUextra 28216420 28216642 -788014 + LSU-rRNA_Dme rRNA rRNA 1 222 -3678 1 800 1277 83 112 51 chrUextra 28216773 28217031 -787625 + DM176_LTR LTR Gypsy 221 480 -27 1 800 1770 19 335 3 chrUextra 28217031 28217279 -787377 + DM176_I LTR Gypsy 1 330 -6090 1 800 2817 96 8 10 chrUextra 28217399 28217895 -786761 + DMSAT6 Satellite Satellite 1 495 -3 1 800 2539 164 12 10 chrUextra 28217995 28218505 -786151 + SAR_DM Satellite Satellite 348 858 -614 1 800 4520 21 2 0 chrUextra 28218606 28219117 -785539 - R1_DM LINE R1 -79 5277 4766 1 800 4611 2 2 6 chrUextra 28219219 28219728 -784928 - SSU-rRNA_Dme rRNA rRNA -637 1358 852 1 800 228 224 0 0 chrUextra 28219832 28219899 -784757 + (TTTG)n Simple_repeat Simple_repeat 4 70 0 1 800 664 0 0 116 chrUextra 28219901 28220100 -784556 + (TTGTG)n Simple_repeat Simple_repeat 5 180 0 1 800 1517 17 0 6 chrUextra 28220111 28220292 -784364 + (TTGTG)n Simple_repeat Simple_repeat 1 180 0 1 800 300 91 0 0 chrUextra 28220292 28220335 -784321 + (CGTTG)n Simple_repeat Simple_repeat 1 44 0 1 800 405 0 0 0 chrUextra 28221049 28221094 -783562 + (GAGAA)n Simple_repeat Simple_repeat 2 46 0 1 800 764 318 34 41 chrUextra 28221677 28222094 -782562 + Gypsy_DS LTR Gypsy 2994 3703 -2826 1 800 1171 19 25 6 chrUextra 28222006 28222169 -782487 + TLD2 Unknown Unknown 1 166 -52 1 800 2508 93 10 24 chrUextra 28222269 28222779 -781877 - DMSAT6 Satellite Satellite -120 502 1 1 800 1620 17 0 0 chrUextra 28222879 28223299 -781357 + (TTCTC)n Simple_repeat Simple_repeat 1 420 0 1 800 609 27 0 0 chrUextra 28223314 28223389 -781267 + (GAGAA)n Simple_repeat Simple_repeat 1 75 0 1 800 2891 72 28 8 chrUextra 28223490 28223995 -780661 - DMSAT6 Satellite Satellite -64 514 1 1 800 2519 98 40 28 chrUextra 28224099 28224608 -780048 + DMSAT6 Satellite Satellite 1 515 -4 1 800 650 14 0 0 chrUextra 28224709 28224783 -779873 + NOMAD_I LTR Gypsy 1020 1093 -5479 1 800 2726 96 0 7 chrUextra 28224778 28225218 -779438 + NOMAD_I LTR Gypsy 5499 5935 -637 1 800 1369 93 8 28 chrUextra 28225319 28225540 -779116 + STALKER4_LTR LTR Gypsy 218 399 -3 1 800 25 0 0 0 chrUextra 28225628 28225653 -779003 + AT_rich Low_complexity Low_complexity 1 25 0 1 800 589 245 7 7 chrUextra 28225677 28225829 -778827 + Stalker2_I LTR Gypsy 291 442 -6960 1 800 2636 78 20 28 chrUextra 28227147 28227653 -777003 + DMSAT6 Satellite Satellite 1 502 -3 1 800 514 73 0 0 chrUextra 28227756 28227824 -776832 + G2_DM LINE Jockey 2461 2528 -574 1 800 2930 40 11 0 chrUextra 28227824 28228177 -776479 - G2_DM LINE Jockey -8 3094 2738 1 800 499 167 0 0 chrUextra 28228176 28228254 -776402 - G2_DM LINE Jockey -521 2581 2504 1 800 351 21 0 110 chrUextra 28228365 28228474 -776182 + (TTGTG)n Simple_repeat Simple_repeat 4 100 0 1 800 2373 117 16 67 chrUextra 28228986 28229481 -775175 - DMSAT6 Satellite Satellite 0 470 1 1 800 269 184 92 33 chrUextra 28229616 28229768 -774888 + (TCTG)n Simple_repeat Simple_repeat 4 164 0 1 800 243 167 106 21 chrUextra 28229914 28230055 -774601 + (TCTA)n Simple_repeat Simple_repeat 4 156 0 1 800 359 109 0 0 chrUextra 28230801 28230856 -773800 - ACCORD2_I LTR Gypsy -36 7176 7122 1 800 1115 21 0 0 chrUextra 28230849 28230989 -773667 - ACCORD2_I LTR Gypsy -5438 1774 1635 1 800 920 91 203 31 chrUextra 28231049 28231276 -773380 - ACCORD2_I LTR Gypsy -5438 1774 1509 1 800 2580 162 12 4 chrUextra 28231422 28231919 -772737 + SAR_DM Satellite Satellite 369 869 -603 1 800 2409 100 6 78 chrUextra 28232019 28232517 -772139 + DMSAT6 Satellite Satellite 5 466 -4 1 800 205 321 0 0 chrUextra 28232837 28232918 -771738 + GA-rich Low_complexity Low_complexity 2 82 0 1 800 1143 40 6 44 chrUextra 28232979 28233137 -771519 - BATUMI_LTR LTR Pao 0 272 121 1 800 186 71 0 0 chrUextra 28234288 28234316 -770340 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1 800 274 185 90 30 chrUextra 28234475 28234683 -769973 + (TAGA)n Simple_repeat Simple_repeat 1 220 0 1 800 256 176 72 88 chrUextra 28234759 28234940 -769716 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 800 618 39 0 0 chrUextra 28235064 28235141 -769515 + (ATATG)n Simple_repeat Simple_repeat 3 79 0 1 800 1380 44 0 0 chrUextra 28235143 28235323 -769333 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 800 198 0 0 0 chrUextra 28235347 28235369 -769287 + (ATAAG)n Simple_repeat Simple_repeat 1 22 0 1 800 1290 56 0 0 chrUextra 28235390 28235570 -769086 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 800 2502 175 6 8 chrUextra 28235672 28236180 -768476 + SAR_DM Satellite Satellite 411 917 -555 1 800 2368 120 26 10 chrUextra 28236888 28237390 -767266 - DMSAT6 Satellite Satellite 0 510 1 1 800 2438 109 49 24 chrUextra 28237497 28238004 -766652 + DMSAT6 Satellite Satellite 1 519 -141 1 800 34 24 0 0 chrUextra 28238163 28238204 -766452 + AT_rich Low_complexity Low_complexity 1 41 0 1 800 2634 102 24 9 chrUextra 28239349 28239804 -764852 + DMSAT6 Satellite Satellite 9 470 0 1 800 993 17 0 0 chrUextra 28239928 28240043 -764613 + (ATAAG)n Simple_repeat Simple_repeat 1 115 0 1 800 2386 123 18 18 chrUextra 28240536 28241043 -763613 + DMSAT6 Satellite Satellite 1 507 -64 1 800 4300 2 0 4 chrUextra 28241143 28241616 -763040 + LSU-rRNA_Dme rRNA rRNA 2162 2632 -1268 1 800 300 0 0 0 chrUextra 28241616 28241650 -763006 + R1_DM LINE R1 1 34 -5322 1 800 4491 2 6 6 chrUextra 28241750 28242257 -762399 - LSU-rRNA_Dme rRNA rRNA -2188 1712 1206 1 800 4684 2 4 0 chrUextra 28243571 28244078 -760578 + SSU-rRNA_Dme rRNA rRNA 1392 1900 -95 1 800 4567 4 2 4 chrUextra 28244178 28244685 -759971 - R1_DM LINE R1 -1236 4120 3615 1 800 1455 35 0 4 chrUextra 28244787 28245013 -759643 + (ATAAG)n Simple_repeat Simple_repeat 1 225 0 1 800 1236 67 0 0 chrUextra 28245025 28245205 -759451 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 800 759 11 0 0 chrUextra 28245205 28245292 -759364 + (GAGAA)n Simple_repeat Simple_repeat 1 88 0 1 800 1434 53 4 2 chrUextra 28245392 28245899 -758757 + (CTATT)n Simple_repeat Simple_repeat 1 507 0 1 800 708 45 0 0 chrUextra 28246001 28246089 -758567 + (TTTTC)n Simple_repeat Simple_repeat 1 88 0 1 800 1071 102 0 0 chrUextra 28246099 28246276 -758380 + (TTCTC)n Simple_repeat Simple_repeat 4 180 0 1 800 1434 36 0 4 chrUextra 28246276 28246498 -758158 + (CTTAT)n Simple_repeat Simple_repeat 1 221 0 1 800 1620 0 0 0 chrUextra 28247230 28247410 -757246 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 800 241 163 0 0 chrUextra 28248427 28248476 -756180 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 1 800 386 0 0 162 chrUextra 28248468 28248821 -755835 + (ACATG)n Simple_repeat Simple_repeat 1 295 0 1 800 460 0 0 139 chrUextra 28249036 28249455 -755201 + (TCTCTG)n Simple_repeat Simple_repeat 1 360 0 1 800 325 0 129 0 chrUextra 28249456 28249541 -755115 + (TC)n Simple_repeat Simple_repeat 1 96 0 1 800 2567 25 0 0 chrUextra 28249641 28249959 -754697 + DOC LINE Jockey 4407 4724 -1 1 800 21 36 0 0 chrUextra 28249978 28250006 -754650 + AT_rich Low_complexity Low_complexity 1 28 0 1 800 1599 5 0 0 chrUextra 28250549 28250753 -753903 + (TTCTC)n Simple_repeat Simple_repeat 1 204 0 1 800 353 114 15 125 chrUextra 28250854 28251054 -753602 + CT-rich Low_complexity Low_complexity 1 178 0 1 800 398 6 0 160 chrUextra 28251088 28251300 -753356 + CT-rich Low_complexity Low_complexity 1 178 0 1 800 26 30 0 0 chrUextra 28251564 28251597 -753059 + AT_rich Low_complexity Low_complexity 1 33 0 1 800 2620 105 10 57 chrUextra 28252076 28252569 -752087 - DMSAT6 Satellite Satellite 0 470 1 1 800 2663 90 22 10 chrUextra 28252679 28253177 -751479 + DMSAT6 Satellite Satellite 1 504 -3 1 800 1620 60 0 2 chrUextra 28253281 28253783 -750873 + (GAGAA)n Simple_repeat Simple_repeat 1 501 0 1 800 2246 185 10 10 chrUextra 28253883 28254386 -750270 - SAR_DM Satellite Satellite -718 754 252 1 800 2478 160 10 6 chrUextra 28254510 28254995 -749661 + SAR_DM Satellite Satellite 371 857 -615 1 800 4636 2 0 2 chrUextra 28255095 28255601 -749055 - SSU-rRNA_Dme rRNA rRNA -1001 994 490 1 800 4651 8 0 0 chrUextra 28256307 28256812 -747844 - LSU-rRNA_Dme rRNA rRNA -1601 2299 1795 1 800 2909 0 0 0 chrUextra 28256912 28257226 -747430 + LSU-rRNA_Dme rRNA rRNA 3587 3900 0 1 800 264 196 0 19 chrUextra 28257327 28257379 -747277 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 800 441 50 0 0 chrUextra 28257520 28257580 -747076 + (TTCTC)n Simple_repeat Simple_repeat 5 64 0 1 800 556 148 59 6 chrUextra 28257591 28257761 -746895 + GA-rich Low_complexity Low_complexity 1 179 0 1 800 254 13 118 13 chrUextra 28257750 28257826 -746830 + (GA)n Simple_repeat Simple_repeat 1 84 0 1 800 438 180 41 18 chrUextra 28257846 28258016 -746640 + A-rich Low_complexity Low_complexity 2 175 0 1 800 2604 93 19 48 chrUextra 28258123 28258599 -746057 - DMSAT6 Satellite Satellite 0 470 9 1 800 28 48 0 0 chrUextra 28258811 28258853 -745803 + AT_rich Low_complexity Low_complexity 1 42 0 1 800 32 0 0 0 chrUextra 28259182 28259214 -745442 + AT_rich Low_complexity Low_complexity 1 32 0 1 800 4259 4 4 0 chrUextra 28259332 28259824 -744832 + NOMAD_I LTR Gypsy 5215 5708 -864 1 800 4537 0 0 6 chrUextra 28259937 28260442 -744214 - SSU-rRNA_Dme rRNA rRNA -913 1082 581 1 800 1685 10 0 15 chrUextra 28260542 28260742 -743914 - LSU-rRNA_Dme rRNA rRNA -3703 197 1 1 800 4607 6 0 2 chrUextra 28261147 28261652 -743004 + R1_DM LINE R1 1404 1907 -3449 1 800 2688 93 17 40 chrUextra 28261757 28262238 -742418 - DMSAT6 Satellite Satellite 0 470 1 1 800 4533 0 0 2 chrUextra 28262962 28263466 -741190 + ROO_I LTR Pao 4938 5440 -2816 1 800 1037 76 8 17 chrUextra 28263596 28264063 -740593 - RSP Satellite Satellite 0 463 1 1 800 4570 2 2 6 chrUextra 28264170 28264674 -739982 - SSU-rRNA_Dme rRNA rRNA -513 1482 981 1 800 933 163 0 0 chrUextra 28264774 28265276 -739380 + (TATG)n Simple_repeat Simple_repeat 1 502 0 1 800 2508 83 0 60 chrUextra 28265385 28265882 -738774 + DMSAT6 Satellite Satellite 1 467 -3 1 800 2496 176 6 4 chrUextra 28265982 28266485 -738171 - SAR_DM Satellite Satellite -544 928 425 1 800 1620 10 0 0 chrUextra 28266587 28266983 -737673 + (CTTAT)n Simple_repeat Simple_repeat 1 396 0 1 800 870 19 0 0 chrUextra 28266986 28267090 -737566 + (TTCTC)n Simple_repeat Simple_repeat 2 105 0 1 800 2435 101 32 34 chrUextra 28268423 28268894 -735762 - DMSAT6 Satellite Satellite 0 470 1 1 800 2490 84 32 24 chrUextra 28269002 28269504 -735152 + DMSAT6 Satellite Satellite 1 506 -74 1 800 1035 0 0 0 chrUextra 28270210 28270325 -734331 + (CACAA)n Simple_repeat Simple_repeat 2 116 0 1 800 1988 14 0 0 chrUextra 28270325 28270546 -734110 - DMRT1B LINE R1 -140 5043 4823 1 800 1565 6 0 0 chrUextra 28270542 28270714 -733942 - DMRT1B LINE R1 -1103 4080 3909 1 800 1620 0 0 5 chrUextra 28271418 28271821 -732835 + (GAGAA)n Simple_repeat Simple_repeat 1 401 0 1 800 28 48 0 0 chrUextra 28272123 28272165 -732491 + AT_rich Low_complexity Low_complexity 1 42 0 1 800 30 0 0 0 chrUextra 28272492 28272522 -732134 + AT_rich Low_complexity Low_complexity 1 30 0 1 800 2709 99 22 2 chrUextra 28272626 28273121 -731535 + DMSAT6 Satellite Satellite 1 504 -267 1 800 1646 169 44 10 chrUextra 28273236 28273726 -730930 + SAR_DM Satellite Satellite 1 506 -749 1 800 2831 81 14 16 chrUextra 28273833 28274336 -730320 - DMSAT6 Satellite Satellite -3 502 1 1 800 1389 13 0 0 chrUextra 28274436 28274595 -730061 + (CAAGA)n Simple_repeat Simple_repeat 3 161 0 1 800 3293 8 0 16 chrUextra 28276848 28277351 -727305 - TABOR_I LTR Gypsy -7 6329 5724 1 800 2457 107 8 73 chrUextra 28278665 28279158 -725498 - DMSAT6 Satellite Satellite 0 470 10 1 800 1657 34 16 33 chrUextra 28279270 28279514 -725142 + NTS_DM Other Other 1 240 0 1 800 1743 42 17 17 chrUextra 28279514 28279754 -724902 + NTS_DM Other Other 1 240 0 1 800 2702 92 24 14 chrUextra 28279864 28280362 -724294 + DMSAT6 Satellite Satellite 1 502 0 1 800 439 7 0 137 chrUextra 28280465 28280808 -723848 + (CAGAGA)n Simple_repeat Simple_repeat 1 296 0 1 800 415 134 67 0 chrUextra 28280845 28280964 -723692 + GA-rich Low_complexity Low_complexity 5 131 0 1 800 1620 11 0 0 chrUextra 28281665 28281952 -722704 + (GAGAA)n Simple_repeat Simple_repeat 1 287 0 1 800 561 0 0 0 chrUextra 28282867 28282935 -721721 + NTS_DM Other Other 66 133 -107 1 800 1484 20 20 20 chrUextra 28282935 28283138 -721518 + NTS_DM Other Other 38 240 0 1 800 1724 27 18 18 chrUextra 28283138 28283367 -721289 + NTS_DM Other Other 1 229 -11 1 800 1554 13 0 0 chrUextra 28284072 28284309 -720347 + (CTTAT)n Simple_repeat Simple_repeat 1 237 0 1 800 317 138 0 12 chrUextra 28284309 28284329 -720327 + (TTCTC)n Simple_repeat Simple_repeat 2 21 0 1 800 1587 6 0 0 chrUextra 28284329 28284509 -720147 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 800 317 138 0 12 chrUextra 28284509 28284569 -720087 + (TTCTC)n Simple_repeat Simple_repeat 2 61 0 1 800 1566 11 0 0 chrUextra 28284673 28284853 -719803 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 1 800 1533 17 0 0 chrUextra 28284883 28285063 -719593 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 800 672 32 0 31 chrUextra 28285073 28285171 -719485 + (CATAT)n Simple_repeat Simple_repeat 2 96 0 1 800 4292 38 0 0 chrUextra 28285271 28285772 -718884 - R1_DM LINE R1 -3389 1967 1467 1 800 2568 91 16 57 chrUextra 28286475 28286965 -717691 - DMSAT6 Satellite Satellite 0 470 1 1 800 1514 43 0 0 chrUextra 28287074 28287258 -717398 + R2_DM LINE R2 3424 3607 0 1 800 483 36 0 0 chrUextra 28287266 28287321 -717335 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 800 2303 0 8 0 chrUextra 28287321 28287575 -717081 + R1_DM LINE R1 1 256 -5100 1 800 2685 92 16 14 chrUextra 28287675 28288174 -716482 - DMSAT6 Satellite Satellite -356 500 1 1 800 4132 28 0 0 chrUextra 28288275 28288775 -715881 - Invader2_I LTR Gypsy -842 3750 3251 1 800 4539 12 0 0 chrUextra 28289475 28289975 -714681 + LSU-rRNA_Dme rRNA rRNA 1862 2361 -1539 1 800 1380 40 0 0 chrUextra 28290076 28290251 -714405 + (TCTTG)n Simple_repeat Simple_repeat 2 176 0 1 800 1496 35 0 3 chrUextra 28290253 28290571 -714085 + (CTTAT)n Simple_repeat Simple_repeat 1 317 0 1 800 2332 124 6 34 chrUextra 28290690 28291166 -713490 + DMSAT6 Satellite Satellite 5 467 -3 1 800 741 57 19 9 chrUextra 28291277 28291384 -713272 + NTS_DM Other Other 26 133 -107 1 800 842 10 0 0 chrUextra 28291384 28291480 -713176 + NTS_DM Other Other 38 133 -107 1 800 1443 30 20 25 chrUextra 28291480 28291684 -712972 + NTS_DM Other Other 38 240 0 1 800 766 44 0 0 chrUextra 28291684 28291775 -712881 + NTS_DM Other Other 1 91 -149 1 800 4076 18 0 6 chrUextra 28291875 28292375 -712281 + LSU-rRNA_Dme rRNA rRNA 438 934 -2966 1 800 2432 119 17 40 chrUextra 28292492 28292966 -711690 + DMSAT6 Satellite Satellite 5 467 -3 1 800 2189 170 13 15 chrUextra 28293098 28293570 -711086 - SAR_DM Satellite Satellite -398 1074 604 1 800 2588 111 21 30 chrUextra 28294290 28294764 -709892 - DMSAT6 Satellite Satellite 0 470 1 1 800 4576 8 0 0 chrUextra 28295470 28295969 -708687 + LSU-rRNA_Dme rRNA rRNA 1843 2341 -1559 1 800 2504 165 8 8 chrUextra 28297268 28297762 -706894 + SAR_DM Satellite Satellite 369 862 -610 1 800 4615 0 0 0 chrUextra 28297866 28298365 -706291 - ROO_I LTR Pao -2450 5806 5308 1 800 516 241 0 0 chrUextra 28299167 28299341 -705315 + (CTTA)n Simple_repeat Simple_repeat 2 175 0 1 800 1620 6 0 6 chrUextra 28299828 28300162 -704494 + (TTGTG)n Simple_repeat Simple_repeat 1 331 0 1 800 502 7 0 134 chrUextra 28300262 28300433 -704223 + (CAAAAA)n Simple_repeat Simple_repeat 4 151 0 1 800 4566 2 0 2 chrUextra 28300860 28301358 -703298 - SSU-rRNA_Dme rRNA rRNA -966 1029 533 1 800 2507 165 6 8 chrUextra 28301465 28301955 -702701 - SAR_DM Satellite Satellite -569 903 415 1 800 2555 67 32 38 chrUextra 28302056 28302554 -702102 + DMSAT6 Satellite Satellite 1 494 -430 1 800 4259 4 2 0 chrUextra 28302695 28303152 -701504 - SSU-rRNA_Dme rRNA rRNA 0 1995 1538 1 800 853 31 344 0 chrUextra 28303253 28303381 -701275 - PROTOP_A DNA P -933 172 1 1 800 4469 8 0 0 chrUextra 28303850 28304335 -700321 - DMRT1B LINE R1 -978 4205 3721 1 800 1409 169 10 8 chrUextra 28304449 28304945 -699711 - SAR_DM Satellite Satellite -587 496 1 1 800 189 74 0 0 chrUextra 28305079 28305106 -699550 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 800 186 71 0 0 chrUextra 28305283 28305311 -699345 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1 800 1386 12 0 0 chrUextra 28306239 28306407 -698249 + DOC6_DM LINE Jockey 4032 4199 -23 1 800 2814 10 0 3 chrUextra 28306424 28306736 -697920 - NOMAD_LTR LTR Gypsy 0 518 208 1 800 2603 109 21 11 chrUextra 28306842 28307307 -697349 + DMSAT6 Satellite Satellite 1 470 0 1 800 2394 168 6 12 chrUextra 28307441 28307930 -696726 - SAR_DM Satellite Satellite -426 1046 561 1 800 2428 109 30 22 chrUextra 28308030 28308527 -696129 - DMSAT6 Satellite Satellite -3 500 1 1 800 639 0 0 0 chrUextra 28309224 28309295 -695361 + (TTCTC)n Simple_repeat Simple_repeat 2 72 0 1 800 1554 11 0 0 chrUextra 28309309 28309489 -695167 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 2409 110 17 35 chrUextra 28311611 28312090 -692566 - DMSAT6 Satellite Satellite 0 470 1 1 801 4069 22 0 2 chrUextra 28312803 28313299 -691357 + ROO_I LTR Pao 695 1189 -7067 1 801 390 81 53 13 chrUextra 28313399 28313474 -691182 + (GAGAA)n Simple_repeat Simple_repeat 2 79 0 1 801 2543 101 21 28 chrUextra 28314613 28315084 -689572 - DMSAT6 Satellite Satellite 0 470 3 1 801 4025 30 45 0 chrUextra 28316383 28316875 -687781 - FW_DM LINE Jockey -2657 2035 1522 1 801 36 0 0 0 chrUextra 28316990 28317026 -687630 + AT_rich Low_complexity Low_complexity 1 36 0 1 801 2149 11 7 14 chrUextra 28317196 28317471 -687185 - DOC LINE Jockey -4 4721 4449 1 801 2367 125 13 26 chrUextra 28317571 28318039 -686617 - DMSAT6 Satellite Satellite -4 466 5 1 801 4173 20 0 4 chrUextra 28318166 28318661 -685995 + LSU-rRNA_Dme rRNA rRNA 536 1028 -2872 1 801 4457 22 0 2 chrUextra 28319356 28319851 -684805 - MAX_I LTR Pao -1246 6668 6175 1 801 1620 8 0 0 chrUextra 28319951 28320446 -684210 + (TAGA)n Simple_repeat Simple_repeat 1 495 0 1 801 2441 100 30 28 chrUextra 28320546 28321041 -683615 - DMSAT6 Satellite Satellite -68 495 1 1 801 2350 169 10 12 chrUextra 28321145 28321636 -683020 + SAR_DM Satellite Satellite 523 1012 -460 1 801 358 22 0 0 chrUextra 28321739 28321784 -682872 + NTS_DM Other Other 157 201 -39 1 801 861 37 0 27 chrUextra 28321836 28321948 -682708 + NTS_DM Other Other 25 133 -107 1 801 986 32 0 23 chrUextra 28321948 28322076 -682580 + NTS_DM Other Other 38 162 -78 1 801 339 67 0 0 chrUextra 28322186 28322231 -682425 + NTS_DM Other Other 4 48 -192 1 801 4148 26 0 0 chrUextra 28322331 28322826 -681830 + LSU-rRNA_Dme rRNA rRNA 232 726 -3174 1 801 506 121 0 39 chrUextra 28323520 28323569 -681087 + polypurine Low_complexity Low_complexity 2 49 0 1 801 1200 84 0 0 chrUextra 28323569 28323748 -680908 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 801 506 121 0 39 chrUextra 28323748 28323827 -680829 + polypurine Low_complexity Low_complexity 50 125 0 1 801 1218 78 0 0 chrUextra 28323827 28324007 -680649 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 1620 13 0 0 chrUextra 28324114 28324563 -680093 + (GAGAA)n Simple_repeat Simple_repeat 1 449 0 1 801 2459 94 2 52 chrUextra 28324708 28325189 -679467 - DMSAT6 Satellite Satellite -13 457 1 1 801 185 59 0 56 chrUextra 28325302 28325312 -679344 + (CGCTG)n Simple_repeat Simple_repeat 2 10 0 1 801 408 20 0 0 chrUextra 28325312 28325361 -679295 + (TTCTC)n Simple_repeat Simple_repeat 5 53 0 1 801 185 59 0 56 chrUextra 28325361 28325386 -679270 + (CGCTG)n Simple_repeat Simple_repeat 2 26 0 1 801 201 94 0 0 chrUextra 28325391 28325423 -679233 + (AGATG)n Simple_repeat Simple_repeat 3 34 0 1 801 1620 0 0 0 chrUextra 28325424 28325784 -678872 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 801 2709 85 41 2 chrUextra 28326499 28326984 -677672 + DMSAT6 Satellite Satellite 1 504 0 1 801 1535 57 0 8 chrUextra 28327689 28328169 -676487 + (TTCTC)n Simple_repeat Simple_repeat 1 475 0 1 801 4516 0 2 4 chrUextra 28328271 28328764 -675892 - SSU-rRNA_Dme rRNA rRNA -714 1281 790 1 801 2615 102 24 6 chrUextra 28328864 28329357 -675299 - DMSAT6 Satellite Satellite 0 501 1 1 801 26 101 0 0 chrUextra 28329484 28329573 -675083 + AT_rich Low_complexity Low_complexity 1 89 0 1 801 2640 97 13 46 chrUextra 28331846 28332322 -672334 - DMSAT6 Satellite Satellite 0 470 11 1 801 968 55 211 40 chrUextra 28332433 28332660 -671996 - ACCORD2_I LTR Gypsy -5438 1774 1509 1 801 1355 58 12 0 chrUextra 28332743 28332914 -671742 - ACCORD2_I LTR Gypsy -5845 1367 1195 1 801 4566 0 0 2 chrUextra 28333014 28333506 -671150 + R1_DM LINE R1 2913 3403 -1953 1 801 504 0 0 0 chrUextra 28333606 28333662 -670994 + (GAGAA)n Simple_repeat Simple_repeat 2 57 0 1 801 1620 0 0 0 chrUextra 28334198 28334472 -670184 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 801 372 88 0 0 chrUextra 28334790 28334847 -669809 + (TTCTC)n Simple_repeat Simple_repeat 1 57 0 1 801 3536 39 0 8 chrUextra 28336566 28337054 -667602 + NOMAD_I LTR Gypsy 5330 5813 -759 1 801 2597 95 8 37 chrUextra 28337158 28337649 -667007 - DMSAT6 Satellite Satellite -23 477 1 1 801 621 102 0 0 chrUextra 28337749 28337857 -666799 + (CTTAT)n Simple_repeat Simple_repeat 3 110 0 1 801 1203 102 0 0 chrUextra 28337858 28338035 -666621 + (TTATA)n Simple_repeat Simple_repeat 4 180 0 1 801 189 74 0 0 chrUextra 28338035 28338062 -666594 + (TATTG)n Simple_repeat Simple_repeat 5 31 0 1 801 1265 57 17 0 chrUextra 28338063 28338240 -666416 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 801 414 41 0 0 chrUextra 28338348 28338397 -666259 - MICROPIA_I LTR Gypsy -1259 3217 3169 1 801 1230 161 16 33 chrUextra 28338399 28338617 -666039 + Gypsy8_LTR LTR Gypsy 1 214 -90 1 801 1212 118 9 51 chrUextra 28338617 28338831 -665825 + Gypsy8_I LTR Gypsy 1 205 -4142 1 801 34 24 0 0 chrUextra 28339247 28339288 -665368 + AT_rich Low_complexity Low_complexity 1 41 0 1 801 460 0 0 139 chrUextra 28339526 28339735 -664921 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 1 801 418 11 0 139 chrUextra 28339778 28339987 -664669 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 1 801 2493 93 41 19 chrUextra 28340708 28341195 -663461 - DMSAT6 Satellite Satellite -343 498 1 1 801 1491 28 0 0 chrUextra 28341887 28342067 -662589 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 801 1050 95 0 0 chrUextra 28342072 28342251 -662405 + (CATCT)n Simple_repeat Simple_repeat 1 179 0 1 801 1547 41 0 4 chrUextra 28342477 28342947 -661709 + (TTGTG)n Simple_repeat Simple_repeat 1 467 0 1 801 189 0 0 0 chrUextra 28342947 28342968 -661688 + (ATGTG)n Simple_repeat Simple_repeat 5 25 0 1 801 2476 105 31 10 chrUextra 28343068 28343559 -661097 - DMSAT6 Satellite Satellite -113 501 1 1 801 1589 189 73 22 chrUextra 28343659 28344145 -660511 + SAR_DM Satellite Satellite 1 510 -225 1 801 228 0 0 161 chrUextra 28346091 28346506 -658150 + (GACTG)n Simple_repeat Simple_repeat 1 348 0 1 801 398 186 23 77 chrUextra 28346622 28347098 -657558 + GA-rich Low_complexity Low_complexity 1 450 0 1 801 234 154 258 15 chrUextra 28347274 28347340 -657316 + LSU-rRNA_Dme rRNA rRNA 2570 2651 -1249 1 801 264 196 0 19 chrUextra 28347367 28347419 -657237 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 801 277 176 0 19 chrUextra 28347450 28347502 -657154 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 801 22 56 0 0 chrUextra 28347515 28347551 -657105 + AT_rich Low_complexity Low_complexity 1 36 0 1 801 918 9 0 27 chrUextra 28347577 28347689 -656967 + NTS_DM Other Other 25 133 -107 1 801 2463 95 26 31 chrUextra 28348381 28348871 -655785 + DMSAT6 Satellite Satellite 1 487 0 1 801 1620 16 0 0 chrUextra 28348972 28349424 -655232 + (CTTAT)n Simple_repeat Simple_repeat 1 452 0 1 801 4441 6 0 2 chrUextra 28349562 28350050 -654606 - R1_DM LINE R1 -3400 1956 1470 1 801 2851 9 0 0 chrUextra 28350150 28350467 -654189 - STALKER4_I LTR Gypsy -4369 2161 1845 1 801 1322 24 0 6 chrUextra 28350474 28350639 -654017 - STALKER4_I LTR Gypsy -5006 1524 1361 1 801 1373 19 0 0 chrUextra 28351328 28351488 -653168 - NTS_DM Other Other -80 160 1 1 801 1871 13 17 17 chrUextra 28351488 28351728 -652928 - NTS_DM Other Other 0 240 1 1 801 625 0 45 34 chrUextra 28351728 28351817 -652839 - NTS_DM Other Other 0 240 151 1 801 4463 4 2 0 chrUextra 28351917 28352406 -652250 + LSU-rRNA_Dme rRNA rRNA 2682 3171 -729 1 801 461 137 48 8 chrUextra 28352506 28352612 -652044 + GA-rich Low_complexity Low_complexity 5 114 0 1 801 778 0 105 0 chrUextra 28352612 28352774 -651882 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 801 461 137 48 8 chrUextra 28352774 28352792 -651864 + polypurine Low_complexity Low_complexity 115 133 0 1 801 1248 17 28 6 chrUextra 28352801 28352977 -651679 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 577 274 0 13 chrUextra 28353096 28353251 -651405 - NINJA_I LTR Pao -2839 3172 3020 1 801 3065 9 0 0 chrUextra 28353240 28353583 -651073 - FW_DM LINE Jockey -2766 1926 1584 1 801 2846 91 12 33 chrUextra 28353685 28354165 -650491 - DMSAT6 Satellite Satellite 0 470 1 1 801 2520 110 8 34 chrUextra 28354273 28354751 -649905 + DMSAT6 Satellite Satellite 5 470 0 1 801 333 153 51 45 chrUextra 28354860 28355038 -649618 + GA-rich Low_complexity Low_complexity 1 179 0 1 801 460 0 0 137 chrUextra 28355048 28355347 -649309 + (CAGAGA)n Simple_repeat Simple_repeat 1 258 0 1 801 1488 22 0 0 chrUextra 28356049 28356229 -648427 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 801 1602 4 0 4 chrUextra 28356240 28356518 -648138 + (CTTAT)n Simple_repeat Simple_repeat 1 276 0 1 801 1620 0 0 0 chrUextra 28356623 28357111 -647545 + (TAGA)n Simple_repeat Simple_repeat 1 488 0 1 801 2756 83 31 2 chrUextra 28357240 28357697 -646959 + DMSAT6 Satellite Satellite 1 470 0 1 801 891 68 0 0 chrUextra 28357939 28358071 -646585 + (TCTTG)n Simple_repeat Simple_repeat 2 133 0 1 801 2546 104 32 28 chrUextra 28358402 28358867 -645789 + DMSAT6 Satellite Satellite 1 467 -3 1 801 544 28 3 132 chrUextra 28358973 28359352 -645304 + T-rich Low_complexity Low_complexity 1 329 0 1 801 4428 0 4 4 chrUextra 28359560 28360047 -644609 - SSU-rRNA_Dme rRNA rRNA -460 1535 1049 1 801 621 0 0 0 chrUextra 28360147 28360216 -644440 + (TTCTC)n Simple_repeat Simple_repeat 3 71 0 1 801 261 75 0 0 chrUextra 28360230 28360270 -644386 + (CGAGA)n Simple_repeat Simple_repeat 1 40 0 1 801 1620 14 0 0 chrUextra 28360271 28360631 -644025 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 801 2355 149 17 36 chrUextra 28360734 28361200 -643456 - HETA LINE telomeric -1185 4896 4440 1 801 2522 96 48 18 chrUextra 28361332 28361788 -642868 - DMSAT6 Satellite Satellite 0 470 1 1 801 3079 66 14 25 chrUextra 28361911 28362394 -642262 - MDG1_I LTR Gypsy -5344 1252 775 1 801 202 265 0 0 chrUextra 28362506 28362555 -642101 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 801 1953 97 15 52 chrUextra 28363080 28363406 -641250 - Gypsy12_I LTR Gypsy -5206 340 27 1 801 777 206 32 21 chrUextra 28363376 28363565 -641091 - Gypsy12_LTR LTR Gypsy -1938 398 208 1 801 23 54 0 0 chrUextra 28363673 28363710 -640946 + AT_rich Low_complexity Low_complexity 1 37 0 1 801 850 9 9 36 chrUextra 28363736 28363848 -640808 + NTS_DM Other Other 25 133 -107 1 801 842 10 0 0 chrUextra 28363848 28363944 -640712 + NTS_DM Other Other 38 133 -107 1 801 1484 20 20 20 chrUextra 28363944 28364147 -640509 + NTS_DM Other Other 38 240 0 1 801 2261 173 6 19 chrUextra 28364840 28365323 -639333 + SAR_DM Satellite Satellite 425 901 -571 1 801 4110 0 5 0 chrUextra 28365424 28365868 -638788 - R1_DM LINE R1 -4910 446 1 1 801 397 0 0 0 chrUextra 28365868 28365910 -638746 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2591 1 801 21 89 0 0 chrUextra 28366015 28366071 -638585 + AT_rich Low_complexity Low_complexity 1 56 0 1 801 1620 13 0 0 chrUextra 28366613 28367082 -637574 + (CTTAT)n Simple_repeat Simple_repeat 1 469 0 1 801 1620 8 0 0 chrUextra 28367182 28367571 -637085 + (GAGAA)n Simple_repeat Simple_repeat 1 389 0 1 801 1041 70 0 0 chrUextra 28367770 28367926 -636730 + (GAGAA)n Simple_repeat Simple_repeat 4 159 0 1 801 1512 20 0 0 chrUextra 28368354 28368557 -636099 + (CACAA)n Simple_repeat Simple_repeat 1 203 0 1 801 2542 4 0 4 chrUextra 28368562 28368840 -635816 - STALKER4_LTR LTR Gypsy 0 402 126 1 801 1203 7 0 0 chrUextra 28369525 28369661 -634995 + (GAGAA)n Simple_repeat Simple_repeat 5 140 0 1 801 3001 80 19 4 chrUextra 28370123 28370586 -634070 - DMSAT6 Satellite Satellite 0 470 1 1 801 4491 2 0 0 chrUextra 28370695 28371180 -633476 + LSU-rRNA_Dme rRNA rRNA 2748 3232 -668 1 801 540 0 0 0 chrUextra 28371705 28371765 -632891 + (GAGAA)n Simple_repeat Simple_repeat 4 63 0 1 801 520 17 17 0 chrUextra 28372450 28372510 -632146 - NTS_DM Other Other -179 61 1 1 801 1858 17 17 17 chrUextra 28372510 28372750 -631906 - NTS_DM Other Other 0 240 1 1 801 1284 22 22 22 chrUextra 28372750 28372935 -631721 - NTS_DM Other Other 0 240 56 1 801 4278 0 2 0 chrUextra 28373035 28373520 -631136 - LSU-rRNA_Dme rRNA rRNA -3101 799 314 1 801 4381 16 0 0 chrUextra 28374205 28374690 -629966 + R1_DM LINE R1 3209 3693 -1663 1 801 4333 6 2 6 chrUextra 28374790 28375274 -629382 - LSU-rRNA_Dme rRNA rRNA -2388 1512 1031 1 801 2353 102 15 53 chrUextra 28375379 28375853 -628803 - DMSAT6 Satellite Satellite -3 467 12 1 801 4464 4 0 0 chrUextra 28376542 28377026 -627630 + R1_DM LINE R1 3062 3545 -1811 1 801 2252 121 43 35 chrUextra 28377144 28377607 -627049 + DMSAT6 Satellite Satellite 1 467 -3 1 801 940 86 8 23 chrUextra 28377711 28378181 -626475 - RSP Satellite Satellite 0 463 1 1 801 2570 94 26 26 chrUextra 28378295 28378762 -625894 - DMSAT6 Satellite Satellite -3 467 1 1 801 897 185 14 2 chrUextra 28378878 28379362 -625294 + SAR_DM Satellite Satellite 1 489 -645 1 801 1582 5 25 15 chrUextra 28380046 28380249 -624407 + NTS_DM Other Other 36 240 0 1 801 1925 0 21 13 chrUextra 28380249 28380487 -624169 + NTS_DM Other Other 1 240 0 1 801 390 0 0 0 chrUextra 28380487 28380529 -624127 + NTS_DM Other Other 1 42 -198 1 801 1312 69 0 11 chrUextra 28380629 28381108 -623548 + (CTATT)n Simple_repeat Simple_repeat 1 473 0 1 801 4485 0 0 0 chrUextra 28381212 28381695 -622961 - R1_DM LINE R1 -3715 1641 1159 1 801 4226 17 50 0 chrUextra 28381795 28382278 -622378 + BATUMI_I LTR Pao 5032 5538 -2425 1 801 3103 48 5 0 chrUextra 28382428 28382805 -621851 - STALKER4_LTR LTR Gypsy -23 379 1 1 801 404 89 0 0 chrUextra 28382805 28382861 -621795 + CIRCE LINE Composite 3659 3714 -2642 1 801 1257 61 0 0 chrUextra 28382963 28383143 -621513 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 801 567 53 0 0 chrUextra 28383147 28383222 -621434 + (ACATG)n Simple_repeat Simple_repeat 2 76 0 1 801 1503 23 0 0 chrUextra 28383225 28383444 -621212 + (AGATG)n Simple_repeat Simple_repeat 1 219 0 1 801 1314 58 0 0 chrUextra 28383544 28383805 -620851 + (GAGAA)n Simple_repeat Simple_repeat 1 261 0 1 801 1196 57 0 6 chrUextra 28383825 28384000 -620656 + (GAGAA)n Simple_repeat Simple_repeat 1 174 0 1 801 234 0 0 0 chrUextra 28384430 28384456 -620200 + (TGG)n Simple_repeat Simple_repeat 1 26 0 1 801 868 24 8 8 chrUextra 28384710 28384836 -619820 + NTS_DM Other Other 76 201 -39 1 801 869 18 0 35 chrUextra 28384888 28385001 -619655 + NTS_DM Other Other 25 133 -107 1 801 1312 18 0 6 chrUextra 28385001 28385166 -619490 + NTS_DM Other Other 38 201 -39 1 801 1158 122 0 0 chrUextra 28385297 28385661 -618995 + (TA)n Simple_repeat Simple_repeat 1 364 0 1 801 441 129 0 0 chrUextra 28385660 28385730 -618926 + (CATA)n Simple_repeat Simple_repeat 2 71 0 1 801 23 33 0 0 chrUextra 28385744 28385774 -618882 + AT_rich Low_complexity Low_complexity 1 30 0 1 801 297 29 0 0 chrUextra 28385876 28385910 -618746 - NTS_DM Other Other -206 34 1 1 801 1826 25 17 17 chrUextra 28385910 28386150 -618506 - NTS_DM Other Other 0 240 1 1 801 1542 20 19 19 chrUextra 28386150 28386358 -618298 - NTS_DM Other Other 0 240 33 1 801 4289 12 4 2 chrUextra 28386458 28386940 -617716 + R1_DM LINE R1 3623 4105 -1251 1 801 2429 167 10 4 chrUextra 28387040 28387521 -617135 + SAR_DM Satellite Satellite 387 870 -602 1 801 1639 40 17 22 chrUextra 28387622 28387852 -616804 - NTS_DM Other Other -11 229 1 1 801 1411 40 20 20 chrUextra 28387852 28388055 -616601 - NTS_DM Other Other 0 240 38 1 801 382 0 0 0 chrUextra 28388055 28388104 -616552 - NTS_DM Other Other -107 133 85 1 801 479 19 0 0 chrUextra 28388204 28388257 -616399 + SSU-rRNA_Dme rRNA rRNA 1317 1369 -626 1 801 34 24 0 0 chrUextra 28388288 28388329 -616327 + AT_rich Low_complexity Low_complexity 1 41 0 1 801 21 95 0 0 chrUextra 28388544 28388607 -616049 + AT_rich Low_complexity Low_complexity 1 63 0 1 801 616 0 0 0 chrUextra 28388619 28388686 -615970 + LSU-rRNA_Dme rRNA rRNA 1 67 -3833 1 801 1620 19 0 0 chrUextra 28388820 28389145 -615511 + (GAGAA)n Simple_repeat Simple_repeat 1 325 0 1 801 2365 111 6 38 chrUextra 28389369 28389847 -614809 - DMSAT6 Satellite Satellite -3 467 5 1 801 2539 107 24 13 chrUextra 28389948 28390404 -614252 - DMSAT6 Satellite Satellite -5 465 5 1 801 2627 94 24 26 chrUextra 28390542 28391010 -613646 + DMSAT6 Satellite Satellite 1 467 -3 1 801 1559 17 0 3 chrUextra 28391691 28391982 -612674 + (TTCTC)n Simple_repeat Simple_repeat 1 290 0 1 801 1421 23 0 6 chrUextra 28391991 28392169 -612487 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 1 801 2625 95 24 9 chrUextra 28392287 28392742 -611914 - DMSAT6 Satellite Satellite 0 470 9 1 801 1540 47 0 11 chrUextra 28394010 28394489 -610167 + (GAGAA)n Simple_repeat Simple_repeat 1 473 0 1 801 1494 23 69 0 chrUextra 28394590 28394858 -609798 + (CAAGA)n Simple_repeat Simple_repeat 1 286 0 1 801 2052 192 8 12 chrUextra 28395170 28395649 -609007 + SAR_DM Satellite Satellite 288 764 -708 1 801 2536 92 24 17 chrUextra 28395767 28396230 -608426 - DMSAT6 Satellite Satellite 0 470 5 1 801 4368 0 2 6 chrUextra 28396330 28396810 -607846 - LSU-rRNA_Dme rRNA rRNA -387 3513 3036 1 801 4211 19 0 4 chrUextra 28396910 28397390 -607266 - LSU-rRNA_Dme rRNA rRNA -1593 2307 1830 1 801 21 57 0 0 chrUextra 28398136 28398171 -606485 + AT_rich Low_complexity Low_complexity 1 35 0 1 801 266 196 0 19 chrUextra 28398184 28398236 -606420 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 801 1972 0 0 0 chrUextra 28398337 28398548 -606108 - LSU-rRNA_Dme rRNA rRNA 0 3900 3690 1 801 1009 69 0 0 chrUextra 28398648 28398778 -605878 - SSU-rRNA_Dme rRNA rRNA -1865 130 1 1 801 2567 96 28 7 chrUextra 28399245 28399705 -604951 + DMSAT6 Satellite Satellite 1 470 0 1 801 3900 15 2 2 chrUextra 28399806 28400285 -604371 + DM176_I LTR Gypsy 1145 1623 -4797 1 801 26 0 0 0 chrUextra 28400782 28400808 -603848 + AT_rich Low_complexity Low_complexity 1 26 0 1 801 4110 33 0 0 chrUextra 28401543 28402022 -602634 - LSU-rRNA_Dme rRNA rRNA -706 3194 2716 1 801 314 0 0 0 chrUextra 28402122 28402156 -602500 - NTS_DM Other Other -206 34 1 1 801 1969 4 17 13 chrUextra 28402156 28402395 -602261 - NTS_DM Other Other 0 240 1 1 801 1419 59 19 15 chrUextra 28402395 28402601 -602055 - NTS_DM Other Other 0 240 34 1 801 2575 111 19 9 chrUextra 28402711 28403176 -601480 + DMSAT6 Satellite Satellite 1 470 0 1 801 2631 90 26 15 chrUextra 28403291 28403752 -600904 - DMSAT6 Satellite Satellite -4 466 1 1 801 2574 117 22 7 chrUextra 28404443 28404906 -599750 - DMSAT6 Satellite Satellite 0 470 1 1 801 2464 165 6 6 chrUextra 28405017 28405492 -599164 - SAR_DM Satellite Satellite -581 891 417 1 801 654 13 0 0 chrUextra 28405592 28405668 -598988 - ALUII_DM Unknown Unknown -164 76 1 1 801 21 57 0 0 chrUextra 28405668 28405703 -598953 + AT_rich Low_complexity Low_complexity 1 35 0 1 801 22 35 0 0 chrUextra 28405899 28405928 -598728 + AT_rich Low_complexity Low_complexity 1 29 0 1 801 34 24 0 0 chrUextra 28406029 28406070 -598586 + AT_rich Low_complexity Low_complexity 1 41 0 1 801 1433 33 0 5 chrUextra 28406170 28406385 -598271 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 1 801 3180 11 1 4 chrUextra 28406747 28407221 -597435 + TABOR_I LTR Gypsy 5752 6336 0 1 801 1554 17 0 0 chrUextra 28407903 28408263 -596393 + (TTCTC)n Simple_repeat Simple_repeat 1 360 0 1 801 306 107 0 0 chrUextra 28408264 28408320 -596336 + (TCTCG)n Simple_repeat Simple_repeat 5 60 0 1 801 468 0 0 0 chrUextra 28408326 28408378 -596278 + (GAGAA)n Simple_repeat Simple_repeat 1 52 0 1 801 189 0 0 0 chrUextra 28408647 28408668 -595988 + (T)n Simple_repeat Simple_repeat 1 21 0 1 801 2330 24 3 0 chrUextra 28408668 28408955 -595701 - DOC LINE Jockey 0 4725 4438 1 801 395 0 0 162 chrUextra 28409097 28409528 -595128 + (CTATG)n Simple_repeat Simple_repeat 1 361 0 1 801 1010 147 0 4 chrUextra 28410209 28410446 -594210 + (TA)n Simple_repeat Simple_repeat 1 235 0 1 801 971 161 0 6 chrUextra 28410466 28410647 -594009 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 801 216 167 0 0 chrUextra 28410649 28410685 -593971 + (CATA)n Simple_repeat Simple_repeat 1 36 0 1 801 3331 71 0 27 chrUextra 28411363 28411840 -592816 + NOMAD_I LTR Gypsy 5586 6049 -523 1 801 3110 16 0 27 chrUextra 28411940 28412416 -592240 - TABOR_I LTR Gypsy -13 6323 5744 1 801 2338 108 57 5 chrUextra 28412516 28412935 -591721 + DMSAT6 Satellite Satellite 30 470 0 1 801 1065 89 0 0 chrUextra 28413103 28413249 -591407 + TART LINE telomeric 1714 1859 -12618 1 801 2557 64 9 0 chrUextra 28413240 28413568 -591088 + TART LINE telomeric 2045 2375 -12102 1 801 2740 80 17 26 chrUextra 28413681 28414144 -590512 + DMSAT6 Satellite Satellite 9 467 -3 1 801 1620 18 0 0 chrUextra 28414245 28414530 -590126 + (AGATG)n Simple_repeat Simple_repeat 1 285 0 1 801 1514 11 0 6 chrUextra 28414530 28414711 -589945 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 1 801 2215 191 11 8 chrUextra 28414820 28415296 -589360 - SAR_DM Satellite Satellite -658 814 338 1 801 2358 103 11 61 chrUextra 28415396 28415872 -588784 - DMSAT6 Satellite Satellite -6 464 13 1 801 2467 63 12 62 chrUextra 28415972 28416447 -588209 + CIRCE LINE Composite 5122 5521 -835 1 801 4374 2 0 4 chrUextra 28416547 28417022 -587634 - LSU-rRNA_Dme rRNA rRNA -514 3386 2914 1 801 458 46 0 139 chrUextra 28417205 28417407 -587249 + A-rich Low_complexity Low_complexity 4 177 0 1 801 312 155 123 0 chrUextra 28417405 28417560 -587096 + (TGAA)n Simple_repeat Simple_repeat 3 176 0 1 801 2264 124 8 32 chrUextra 28417698 28418171 -586485 - DMSAT6 Satellite Satellite 0 470 9 1 801 2459 98 21 30 chrUextra 28418272 28418745 -585911 + DMSAT6 Satellite Satellite 2 470 0 1 801 2172 187 11 8 chrUextra 28419422 28419897 -584759 - SAR_DM Satellite Satellite -489 983 508 1 801 3560 25 20 16 chrUextra 28419997 28420450 -584206 - Gypsy12_LTR LTR Gypsy -796 1540 1086 1 801 189 0 0 0 chrUextra 28420450 28420471 -584185 + (T)n Simple_repeat Simple_repeat 1 21 0 1 801 342 0 0 0 chrUextra 28420571 28420609 -584047 + (TTCTC)n Simple_repeat Simple_repeat 1 38 0 1 801 2514 105 15 35 chrUextra 28422299 28422762 -581894 - DMSAT6 Satellite Satellite 0 470 17 1 801 246 62 0 0 chrUextra 28422869 28422901 -581755 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 1 801 1305 83 0 0 chrUextra 28422901 28423081 -581575 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 1431 50 0 0 chrUextra 28423081 28423261 -581395 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 1 801 780 118 41 20 chrUextra 28423477 28423772 -580884 + CT-rich Low_complexity Low_complexity 1 301 0 1 801 1074 8 0 0 chrUextra 28423790 28423913 -580743 + (GAGAA)n Simple_repeat Simple_repeat 1 123 0 1 801 1239 62 0 0 chrUextra 28424032 28424210 -580446 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 1 801 1151 72 0 6 chrUextra 28424225 28424406 -580250 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 801 423 87 0 0 chrUextra 28424417 28424486 -580170 + (ATAAG)n Simple_repeat Simple_repeat 3 71 0 1 801 662 149 0 11 chrUextra 28424587 28424764 -579892 + T-rich Low_complexity Low_complexity 4 178 0 1 801 226 40 5 142 chrUextra 28424853 28425058 -579598 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 1 801 3285 18 13 38 chrUextra 28425160 28425632 -579024 + Stalker2_I LTR Gypsy 6837 7296 -106 1 801 592 132 66 0 chrUextra 28425732 28425898 -578758 + CT-rich Low_complexity Low_complexity 1 177 0 1 801 598 136 59 6 chrUextra 28425931 28426101 -578555 + CT-rich Low_complexity Low_complexity 1 179 0 1 801 181 139 47 0 chrUextra 28426161 28426204 -578452 + GA-rich Low_complexity Low_complexity 5 49 0 1 801 522 0 0 0 chrUextra 28426720 28426778 -577878 + (CAAGA)n Simple_repeat Simple_repeat 5 62 0 1 801 1469 23 0 6 chrUextra 28427451 28427629 -577027 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 801 223 49 0 47 chrUextra 28427629 28427672 -576984 + (TCTCG)n Simple_repeat Simple_repeat 1 41 0 1 801 1175 67 0 6 chrUextra 28427672 28427852 -576804 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 801 222 62 0 0 chrUextra 28427853 28427885 -576771 + (CAGCT)n Simple_repeat Simple_repeat 3 34 0 1 801 309 26 0 0 chrUextra 28427885 28427923 -576733 + (GAGAA)n Simple_repeat Simple_repeat 5 42 0 1 801 2021 196 11 11 chrUextra 28428030 28428495 -576161 + SAR_DM Satellite Satellite 541 1005 -467 1 801 4338 2 0 0 chrUextra 28428595 28429067 -575589 + DOC LINE Jockey 2368 2839 -1886 1 801 1992 213 4 11 chrUextra 28429177 28429638 -575018 - DM412 LTR Gypsy -597 6300 5843 1 801 1332 0 0 0 chrUextra 28430311 28430459 -574197 + (TCTA)n Simple_repeat Simple_repeat 2 149 0 1 801 898 9 0 35 chrUextra 28430895 28431008 -573648 + NTS_DM Other Other 25 133 -107 1 801 1518 20 20 20 chrUextra 28431008 28431211 -573445 + NTS_DM Other Other 38 240 0 1 801 1240 21 0 0 chrUextra 28431211 28431355 -573301 + NTS_DM Other Other 1 144 -96 1 801 4299 2 2 4 chrUextra 28431455 28431927 -572729 + SSU-rRNA_Dme rRNA rRNA 983 1453 -542 1 801 4212 4 6 4 chrUextra 28432027 28432499 -572157 + LSU-rRNA_Dme rRNA rRNA 939 1411 -2489 1 801 3701 18 0 61 chrUextra 28432599 28433071 -571585 - FW_DM LINE Jockey -2169 2523 2081 1 801 447 35 0 0 chrUextra 28433171 28433228 -571428 + (TTCTC)n Simple_repeat Simple_repeat 4 60 0 1 801 460 0 3 135 chrUextra 28433268 28433587 -571069 + (CAGAGA)n Simple_repeat Simple_repeat 1 276 0 1 801 221 136 61 0 chrUextra 28433577 28433643 -571013 + GA-rich Low_complexity Low_complexity 5 74 0 1 801 3620 2 0 100 chrUextra 28433743 28434215 -570441 + LSU-rRNA_Dme rRNA rRNA 1711 2135 -1765 1 801 2574 94 31 2 chrUextra 28434321 28434778 -569878 - DMSAT6 Satellite Satellite 0 470 1 1 801 481 30 15 0 chrUextra 28434887 28434953 -569703 + NTS_DM Other Other 67 133 -107 1 801 1488 20 20 25 chrUextra 28434953 28435157 -569499 + NTS_DM Other Other 38 240 0 1 801 1203 8 0 0 chrUextra 28435157 28435290 -569366 + NTS_DM Other Other 1 133 -107 1 801 637 0 0 0 chrUextra 28435290 28435359 -569297 + NTS_DM Other Other 38 106 -134 1 801 212 105 53 0 chrUextra 28435459 28435497 -569159 + GA-rich Low_complexity Low_complexity 2 41 0 1 801 4231 0 0 2 chrUextra 28436031 28436502 -568154 + ROO_I LTR Pao 4863 5332 -2924 1 801 1620 2 0 0 chrUextra 28436602 28437005 -567651 + (GAGAA)n Simple_repeat Simple_repeat 1 403 0 1 801 1548 26 0 4 chrUextra 28437744 28438215 -566441 + (CTTAT)n Simple_repeat Simple_repeat 1 468 0 1 801 2332 158 13 13 chrUextra 28438316 28438785 -565871 + SAR_DM Satellite Satellite 588 1056 -416 1 801 468 0 0 0 chrUextra 28439457 28439509 -565147 + (TTCTC)n Simple_repeat Simple_repeat 4 55 0 1 801 1587 15 4 4 chrUextra 28440028 28440499 -564157 + (TATAA)n Simple_repeat Simple_repeat 1 471 0 1 801 1620 3 0 0 chrUextra 28441172 28441463 -563193 + (TTCTC)n Simple_repeat Simple_repeat 1 291 0 1 801 403 27 116 18 chrUextra 28441520 28441632 -563024 + (TATAA)n Simple_repeat Simple_repeat 2 124 0 1 802 3717 26 4 4 chrUextra 28443449 28443919 -560737 + MAX_I LTR Pao 665 1134 -6780 1 802 1191 73 6 16 chrUextra 28444019 28444201 -560455 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 209 79 79 0 chrUextra 28444201 28444239 -560417 + CT-rich Low_complexity Low_complexity 2 42 0 1 802 738 116 41 18 chrUextra 28444268 28444489 -560167 + GA-rich Low_complexity Low_complexity 1 226 0 1 802 956 69 33 29 chrUextra 28444591 28444801 -559855 + (TTCTC)n Simple_repeat Simple_repeat 1 211 0 1 802 1587 9 0 0 chrUextra 28444824 28445057 -559599 + (GAGAA)n Simple_repeat Simple_repeat 1 233 0 1 802 4132 13 0 6 chrUextra 28445159 28445629 -559027 - DOC LINE Jockey -1061 3664 3198 1 802 2547 100 4 35 chrUextra 28445741 28446199 -558457 - DMSAT6 Satellite Satellite -3 467 24 1 802 1482 50 0 0 chrUextra 28446303 28446663 -557993 + (TTCTC)n Simple_repeat Simple_repeat 1 360 0 1 802 474 33 0 0 chrUextra 28446664 28446724 -557932 + (TCTCG)n Simple_repeat Simple_repeat 1 60 0 1 802 339 44 0 0 chrUextra 28446724 28446768 -557888 + (GAGAA)n Simple_repeat Simple_repeat 1 45 0 1 802 1620 0 0 0 chrUextra 28447437 28447906 -556750 + (GAGAA)n Simple_repeat Simple_repeat 1 469 0 1 802 2617 93 19 19 chrUextra 28448006 28448475 -556181 - DMSAT6 Satellite Satellite 0 470 2 1 802 4238 4 0 2 chrUextra 28448575 28449044 -555612 - ROO_I LTR Pao -3719 4537 4070 1 802 1620 2 0 0 chrUextra 28449146 28449613 -555043 + (GAGAA)n Simple_repeat Simple_repeat 1 467 0 1 802 1305 0 0 0 chrUextra 28449713 28449858 -554798 + (GAGAA)n Simple_repeat Simple_repeat 4 148 0 1 802 2321 122 47 13 chrUextra 28450297 28450744 -553912 + DMSAT6 Satellite Satellite 9 470 0 1 802 2569 105 25 11 chrUextra 28450854 28451299 -553357 + DMSAT6 Satellite Satellite 17 467 -3 1 802 2137 108 19 86 chrUextra 28451987 28452452 -552204 + DMSAT6 Satellite Satellite 37 470 0 1 802 2516 92 39 22 chrUextra 28452566 28453023 -551633 + DMSAT6 Satellite Satellite 1 465 -5 1 802 4289 0 2 0 chrUextra 28453691 28454159 -550497 + LSU-rRNA_Dme rRNA rRNA 657 1125 -2775 1 802 4131 4 4 4 chrUextra 28454259 28454723 -549933 + R1_DM LINE R1 3489 3952 -1404 1 802 4244 8 0 2 chrUextra 28454827 28455295 -549361 - R1_DM LINE R1 -2115 3241 2775 1 802 2270 169 7 9 chrUextra 28455403 28455863 -548793 + SAR_DM Satellite Satellite 369 827 -645 1 802 1479 6 0 0 chrUextra 28455965 28456133 -548523 + (GAGAA)n Simple_repeat Simple_repeat 1 168 0 1 802 1620 9 0 0 chrUextra 28456532 28456997 -547659 + (GAGAA)n Simple_repeat Simple_repeat 1 465 0 1 802 4307 0 0 2 chrUextra 28457099 28457566 -547090 + R1_DM LINE R1 2822 3287 -2069 1 802 675 62 0 0 chrUextra 28457669 28457766 -546890 + (CTACT)n Simple_repeat Simple_repeat 4 100 0 1 802 1578 26 0 3 chrUextra 28457766 28458076 -546580 + (TATAA)n Simple_repeat Simple_repeat 1 309 0 1 802 386 39 19 0 chrUextra 28458081 28458133 -546523 + (GAGAA)n Simple_repeat Simple_repeat 5 57 0 1 802 2484 95 26 30 chrUextra 28458233 28458698 -545958 - DMSAT6 Satellite Satellite -7 463 1 1 802 1620 11 0 11 chrUextra 28458800 28459264 -545392 + (TAGA)n Simple_repeat Simple_repeat 1 458 0 1 802 1566 10 0 0 chrUextra 28459934 28460137 -544519 + (CACAA)n Simple_repeat Simple_repeat 1 203 0 1 802 315 0 0 0 chrUextra 28460810 28460845 -543811 + (T)n Simple_repeat Simple_repeat 1 35 0 1 802 1620 17 0 7 chrUextra 28461635 28462046 -542610 + (TTCTC)n Simple_repeat Simple_repeat 1 407 0 1 802 432 0 0 0 chrUextra 28462053 28462101 -542555 + (GAGAA)n Simple_repeat Simple_repeat 5 52 0 1 802 3984 22 0 4 chrUextra 28462201 28462667 -541989 + ROO_I LTR Pao 1255 1718 -6538 1 802 1496 25 0 12 chrUextra 28462768 28463011 -541645 + (TTCTC)n Simple_repeat Simple_repeat 1 240 0 1 802 1491 28 0 0 chrUextra 28463052 28463232 -541424 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 1620 19 0 0 chrUextra 28463333 28463644 -541012 + (GAGAA)n Simple_repeat Simple_repeat 1 311 0 1 802 1149 26 7 13 chrUextra 28463644 28463799 -540857 + (TTATA)n Simple_repeat Simple_repeat 5 158 0 1 802 3634 18 0 34 chrUextra 28463899 28464365 -540291 - ROO_I LTR Pao -7467 789 340 1 802 1282 18 0 12 chrUextra 28464534 28464700 -539956 - NTS_DM Other Other -39 201 38 1 802 918 9 0 27 chrUextra 28464700 28464812 -539844 - NTS_DM Other Other -107 133 25 1 802 449 30 0 15 chrUextra 28464864 28464931 -539725 - NTS_DM Other Other -39 201 136 1 802 2763 87 22 11 chrUextra 28466165 28466629 -538027 - DMSAT6 Satellite Satellite 0 470 2 1 802 2499 114 28 9 chrUextra 28467300 28467758 -536898 + DMSAT6 Satellite Satellite 1 467 -3 1 802 2633 86 27 31 chrUextra 28467878 28468322 -536334 - DMSAT6 Satellite Satellite -28 442 1 1 802 793 60 0 49 chrUextra 28468562 28468685 -535971 - NOMAD_LTR LTR Gypsy 0 518 402 1 802 793 63 27 65 chrUextra 28468686 28468872 -535784 + GA-rich Low_complexity Low_complexity 1 179 0 1 802 3155 109 2 2 chrUextra 28468994 28469453 -535203 - HETA LINE telomeric -2896 3185 2727 1 802 1554 11 0 0 chrUextra 28469564 28469744 -534912 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 802 1467 4 0 12 chrUextra 28469757 28470015 -534641 + (TCTA)n Simple_repeat Simple_repeat 1 255 0 1 802 3828 13 4 4 chrUextra 28470681 28471145 -533511 - Invader2_I LTR Gypsy -1946 2646 2183 1 802 814 107 41 6 chrUextra 28471251 28471420 -533236 + CT-rich Low_complexity Low_complexity 5 179 0 1 802 683 12 0 12 chrUextra 28471443 28471528 -533128 + (GAGAA)n Simple_repeat Simple_repeat 2 85 0 1 802 1340 39 0 6 chrUextra 28471528 28471708 -532948 + (CGAGA)n Simple_repeat Simple_repeat 2 180 0 1 802 228 100 0 0 chrUextra 28472937 28472967 -531689 - DMSAT6 Satellite Satellite -363 107 78 1 802 1624 0 0 0 chrUextra 28474065 28474238 -530418 - LSU-rRNA_Dme rRNA rRNA -1940 1960 1788 1 802 2124 0 8 4 chrUextra 28474284 28474528 -530128 - LSU-rRNA_Dme rRNA rRNA -2113 1787 1543 1 802 1173 73 0 0 chrUextra 28475192 28475370 -529286 + (CATGT)n Simple_repeat Simple_repeat 1 178 0 1 802 1587 7 0 25 chrUextra 28475370 28475653 -529003 + (CATCT)n Simple_repeat Simple_repeat 1 275 0 1 802 3697 50 2 2 chrUextra 28475753 28476215 -528441 + PROTOP_A DNA P 81 542 -563 1 802 1154 114 0 14 chrUextra 28476321 28476615 -528041 + (CTATT)n Simple_repeat Simple_repeat 1 289 0 1 802 465 50 0 0 chrUextra 28476617 28476677 -527979 + (TTCTC)n Simple_repeat Simple_repeat 1 60 0 1 802 2602 102 18 13 chrUextra 28476883 28477338 -527318 + DMSAT6 Satellite Satellite 1 457 -13 1 802 1171 45 0 87 chrUextra 28477483 28477901 -526755 + (TTGTG)n Simple_repeat Simple_repeat 1 381 0 1 802 23 0 0 0 chrUextra 28478121 28478144 -526512 + AT_rich Low_complexity Low_complexity 1 23 0 1 802 2592 25 0 6 chrUextra 28478144 28478463 -526193 - FW_DM LINE Jockey 0 4692 4376 1 802 1323 50 0 13 chrUextra 28479125 28479587 -525069 + (TTCTC)n Simple_repeat Simple_repeat 1 456 0 1 802 939 9 0 0 chrUextra 28479687 28479795 -524861 + (GAGAA)n Simple_repeat Simple_repeat 2 109 0 1 802 594 0 0 0 chrUextra 28480249 28480315 -524341 + (TTCTC)n Simple_repeat Simple_repeat 1 66 0 1 802 189 94 0 0 chrUextra 28480317 28480349 -524307 + (CGACG)n Simple_repeat Simple_repeat 4 35 0 1 802 1620 22 0 0 chrUextra 28480349 28480708 -523948 + (GAGAA)n Simple_repeat Simple_repeat 1 359 0 1 802 4210 4 0 2 chrUextra 28480811 28481273 -523383 + R1_DM LINE R1 2734 3194 -2162 1 802 2689 89 20 24 chrUextra 28481383 28481834 -522822 + DMSAT6 Satellite Satellite 5 453 -17 1 802 1930 205 9 9 chrUextra 28481935 28482397 -522259 + SAR_DM Satellite Satellite 465 926 -546 1 802 288 0 0 0 chrUextra 28482497 28482529 -522127 + (TTCTC)n Simple_repeat Simple_repeat 3 34 0 1 802 2374 115 11 28 chrUextra 28483060 28483517 -521139 - DMSAT6 Satellite Satellite -13 457 9 1 802 1284 28 0 43 chrUextra 28483619 28483807 -520849 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 499 164 40 15 chrUextra 28483807 28484080 -520576 + CT-rich Low_complexity Low_complexity 1 280 0 1 802 2425 98 33 42 chrUextra 28484181 28484639 -520017 + DMSAT6 Satellite Satellite 17 470 0 1 802 2086 179 9 13 chrUextra 28485302 28485755 -518901 + SAR_DM Satellite Satellite 626 1076 -396 1 802 2150 4 0 0 chrUextra 28485863 28486096 -518560 + POGO DNA Pogo 690 922 -1199 1 802 2109 0 0 0 chrUextra 28486093 28486324 -518332 + POGO DNA Pogo 1629 1859 -262 1 802 1274 22 22 27 chrUextra 28486424 28486609 -518047 + NTS_DM Other Other 57 240 0 1 802 1880 13 17 17 chrUextra 28486609 28486849 -517807 + NTS_DM Other Other 1 240 0 1 802 319 28 0 0 chrUextra 28486849 28486885 -517771 + NTS_DM Other Other 1 36 -204 1 802 4012 18 0 11 chrUextra 28486985 28487446 -517210 - FW_DM LINE Jockey -2027 2665 2210 1 802 1620 0 0 0 chrUextra 28487546 28487757 -516899 + (TCTTG)n Simple_repeat Simple_repeat 1 211 0 1 802 1991 4 0 9 chrUextra 28487757 28487983 -516673 + DIVER_LTR LTR Pao 1 224 0 1 802 1515 39 0 2 chrUextra 28488106 28488566 -516090 + (TCTTG)n Simple_repeat Simple_repeat 1 458 0 1 802 4290 2 0 0 chrUextra 28488666 28489126 -515530 + LSU-rRNA_Dme rRNA rRNA 2444 2903 -997 1 802 2423 47 60 0 chrUextra 28489786 28490087 -514569 - PROTOP DNA P -4161 319 1 1 802 306 0 0 0 chrUextra 28490346 28490380 -514276 + (TCTTG)n Simple_repeat Simple_repeat 1 34 0 1 802 218 196 0 21 chrUextra 28490527 28490574 -514082 + (CTCG)n Simple_repeat Simple_repeat 1 46 0 1 802 4045 2 7 7 chrUextra 28492026 28492485 -512171 - LSU-rRNA_Dme rRNA rRNA -2203 1697 1239 1 802 4161 13 0 0 chrUextra 28492585 28493044 -511612 + SSU-rRNA_Dme rRNA rRNA 438 896 -1099 1 802 78 104 0 0 chrUextra 28493149 28493437 -511219 + AT_rich Low_complexity Low_complexity 1 288 0 1 802 1306 12 0 0 chrUextra 28493437 28493603 -511053 - DOC6_DM LINE Jockey 0 4222 4057 1 802 1620 0 0 5 chrUextra 28495381 28495791 -508865 + (TCTA)n Simple_repeat Simple_repeat 1 407 0 1 802 315 0 0 0 chrUextra 28495802 28495837 -508819 + (TCTA)n Simple_repeat Simple_repeat 1 35 0 1 802 1158 148 0 0 chrUextra 28496511 28496947 -507709 + (TA)n Simple_repeat Simple_repeat 1 436 0 1 802 2408 98 9 37 chrUextra 28497057 28497493 -507163 + DMSAT6 Satellite Satellite 44 467 -3 1 802 642 13 0 0 chrUextra 28498173 28498248 -506408 + (GAGAA)n Simple_repeat Simple_repeat 5 79 0 1 802 1144 67 0 11 chrUextra 28498248 28498430 -506226 + (CGAGA)n Simple_repeat Simple_repeat 1 180 0 1 802 1328 22 0 22 chrUextra 28498437 28498621 -506035 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 1395 39 0 3 chrUextra 28498731 28499015 -505641 + (TTGTG)n Simple_repeat Simple_repeat 1 283 0 1 802 549 0 0 0 chrUextra 28499015 28499076 -505580 + (CTGTG)n Simple_repeat Simple_repeat 5 65 0 1 802 717 102 0 0 chrUextra 28499080 28499188 -505468 + (CACAA)n Simple_repeat Simple_repeat 3 110 0 1 802 4076 2 4 4 chrUextra 28499292 28499745 -504911 + LSU-rRNA_Dme rRNA rRNA 1004 1456 -2444 1 802 1079 34 27 0 chrUextra 28499848 28499997 -504659 - DMSAT6 Satellite Satellite -64 406 254 1 802 1775 88 30 17 chrUextra 28500000 28500302 -504354 - DMSAT6 Satellite Satellite -5 465 160 1 802 2633 92 29 15 chrUextra 28500402 28500857 -503799 - DMSAT6 Satellite Satellite -1 469 9 1 802 1470 42 0 3 chrUextra 28500960 28501344 -503312 + (TAGA)n Simple_repeat Simple_repeat 1 383 0 1 802 615 14 0 0 chrUextra 28501344 28501416 -503240 + (CGAT)n Simple_repeat Simple_repeat 1 72 0 1 802 525 199 0 0 chrUextra 28501827 28501973 -502683 + (AATAG)n Simple_repeat Simple_repeat 3 148 0 1 802 2466 103 20 14 chrUextra 28502073 28502517 -502139 - DMSAT6 Satellite Satellite -23 447 1 1 802 213 0 0 160 chrUextra 28502699 28502886 -501770 + (CACAA)n Simple_repeat Simple_repeat 4 160 0 1 802 4104 13 2 0 chrUextra 28503742 28504198 -500458 - FW_DM LINE Jockey -753 3939 3483 1 802 1580 0 0 6 chrUextra 28504302 28504483 -500173 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 501 94 0 0 chrUextra 28504489 28504574 -500082 + (CAGAA)n Simple_repeat Simple_repeat 2 86 0 1 802 909 118 0 0 chrUextra 28504574 28504752 -499904 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 802 2536 92 26 13 chrUextra 28504854 28505307 -499349 + DMSAT6 Satellite Satellite 6 464 -6 1 802 2433 108 14 14 chrUextra 28505979 28506422 -498234 - DMSAT6 Satellite Satellite 0 470 28 1 802 183 0 128 0 chrUextra 28507078 28507125 -497531 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 802 434 6 10 132 chrUextra 28507134 28507339 -497317 + (TCTCTG)n Simple_repeat Simple_repeat 1 180 0 1 802 1041 75 23 11 chrUextra 28507358 28507534 -497122 + (TTCTC)n Simple_repeat Simple_repeat 2 179 0 1 802 414 53 0 0 chrUextra 28507639 28507696 -496960 + (TTCTC)n Simple_repeat Simple_repeat 5 61 0 1 802 2594 96 20 9 chrUextra 28508198 28508642 -496014 + DMSAT6 Satellite Satellite 9 457 -13 1 802 1587 9 0 2 chrUextra 28508760 28509193 -495463 + (CAGAG)n Simple_repeat Simple_repeat 1 431 0 1 802 4106 0 0 2 chrUextra 28509302 28509758 -494898 - ROO_I LTR Pao -6234 2022 1568 1 802 1593 9 0 15 chrUextra 28509858 28510314 -494342 + (TCTA)n Simple_repeat Simple_repeat 1 449 0 1 802 1407 57 0 0 chrUextra 28510971 28511422 -493234 + (ATAAG)n Simple_repeat Simple_repeat 1 451 0 1 802 2630 87 14 14 chrUextra 28511538 28511979 -492677 + DMSAT6 Satellite Satellite 1 441 -29 1 802 208 144 133 0 chrUextra 28512083 28512173 -492483 + (CAAG)n Simple_repeat Simple_repeat 2 103 0 1 802 306 102 0 141 chrUextra 28512301 28512507 -492149 + A-rich Low_complexity Low_complexity 2 178 0 1 802 2068 12 4 4 chrUextra 28512634 28512875 -491781 - IDEFIX_LTR LTR Gypsy -11 583 343 1 802 1631 45 0 0 chrUextra 28512869 28513089 -491567 - IDEFIX_I LTR Gypsy -334 5294 5075 1 802 879 44 29 29 chrUextra 28513189 28513329 -491327 + NTS_DM Other Other 101 240 0 1 802 1817 25 17 21 chrUextra 28513329 28513570 -491086 + NTS_DM Other Other 1 240 0 1 802 671 14 0 0 chrUextra 28513570 28513643 -491013 + NTS_DM Other Other 1 73 -167 1 802 1254 52 0 24 chrUextra 28513744 28514037 -490619 + (CATAG)n Simple_repeat Simple_repeat 1 285 0 1 802 835 88 0 13 chrUextra 28514049 28514199 -490457 + (CATAG)n Simple_repeat Simple_repeat 1 148 0 1 802 1253 306 9 18 chrUextra 28514301 28514753 -489903 - MICROPIA_I LTR Gypsy -878 3598 3151 1 802 2584 109 18 7 chrUextra 28515419 28515864 -488792 - DMSAT6 Satellite Satellite 0 470 21 1 802 4163 2 0 4 chrUextra 28515964 28516419 -488237 + SSU-rRNA_Dme rRNA rRNA 1244 1696 -299 1 802 2119 174 9 11 chrUextra 28517084 28517527 -487129 - SAR_DM Satellite Satellite -396 1076 635 1 802 782 79 66 18 chrUextra 28517632 28517799 -486857 + CT-rich Low_complexity Low_complexity 5 179 0 1 802 1444 22 0 11 chrUextra 28518194 28518376 -486280 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 1 802 1389 45 0 0 chrUextra 28518391 28518635 -486021 + (AATAG)n Simple_repeat Simple_repeat 1 244 0 1 802 1620 20 0 2 chrUextra 28518735 28519187 -485469 + (GAGAA)n Simple_repeat Simple_repeat 1 451 0 1 802 4194 4 0 0 chrUextra 28519289 28519743 -484913 + LSU-rRNA_Dme rRNA rRNA 2050 2503 -1397 1 802 1109 83 0 6 chrUextra 28519844 28520025 -484631 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 1587 6 0 0 chrUextra 28520026 28520206 -484450 + (TCTCG)n Simple_repeat Simple_repeat 1 180 0 1 802 558 99 0 0 chrUextra 28520206 28520297 -484359 + (TTCTC)n Simple_repeat Simple_repeat 4 94 0 1 802 2236 153 26 20 chrUextra 28520397 28520851 -483805 - SAR_DM Satellite Satellite -639 833 377 1 802 582 51 0 0 chrUextra 28520951 28521029 -483627 + (TTCTC)n Simple_repeat Simple_repeat 3 80 0 1 802 2414 101 22 37 chrUextra 28521505 28521959 -482697 - DMSAT6 Satellite Satellite -15 455 9 1 802 1328 51 0 2 chrUextra 28522059 28522510 -482146 + (CTTAT)n Simple_repeat Simple_repeat 1 450 0 1 802 1620 0 0 0 chrUextra 28522868 28523048 -481608 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 1554 40 0 2 chrUextra 28523165 28523571 -481085 + (GAAAA)n Simple_repeat Simple_repeat 1 404 0 1 802 333 0 0 0 chrUextra 28523571 28523608 -481048 + (GAGAA)n Simple_repeat Simple_repeat 1 37 0 1 802 2644 73 63 16 chrUextra 28523725 28524171 -480485 + DMSAT6 Satellite Satellite 1 467 -3 1 802 540 0 0 0 chrUextra 28524271 28524331 -480325 + (TTCTC)n Simple_repeat Simple_repeat 2 61 0 1 802 1599 14 0 0 chrUextra 28524356 28524716 -479940 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 802 523 177 28 28 chrUextra 28525953 28526238 -478418 + CT-rich Low_complexity Low_complexity 1 285 0 1 802 385 25 0 135 chrUextra 28526238 28526379 -478277 + T-rich Low_complexity Low_complexity 2 123 0 1 802 2440 113 16 11 chrUextra 28527031 28527480 -477176 - DMSAT6 Satellite Satellite -3 467 17 1 802 653 199 7 52 chrUextra 28527593 28527747 -476909 + HETRP_DM Satellite Satellite 1518 1664 -208 1 802 192 40 0 0 chrUextra 28527910 28527935 -476721 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 802 425 216 0 10 chrUextra 28527935 28528033 -476623 + HETRP_DM Satellite Satellite 1549 1645 -227 1 802 928 9 0 27 chrUextra 28528141 28528253 -476403 + NTS_DM Other Other 25 133 -107 1 802 1199 73 0 6 chrUextra 28528253 28528418 -476238 + NTS_DM Other Other 38 201 -39 1 802 810 19 0 53 chrUextra 28528470 28528584 -476072 + NTS_DM Other Other 25 132 -108 1 802 2389 102 29 16 chrUextra 28529235 28529682 -474974 - DMSAT6 Satellite Satellite -1 469 17 1 802 2434 99 43 16 chrUextra 28529786 28530228 -474428 + DMSAT6 Satellite Satellite 17 470 0 1 802 1745 18 17 22 chrUextra 28530336 28530566 -474090 - NTS_DM Other Other -11 229 1 1 802 1615 23 18 23 chrUextra 28530566 28530786 -473870 - NTS_DM Other Other 0 240 22 1 802 192 0 102 20 chrUextra 28530890 28530939 -473717 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 802 1578 18 0 0 chrUextra 28530949 28531333 -473323 + (GAGAA)n Simple_repeat Simple_repeat 1 384 0 1 802 1448 68 0 18 chrUextra 28531986 28532436 -472220 + (TAGA)n Simple_repeat Simple_repeat 1 441 0 1 802 1737 0 5 0 chrUextra 28532536 28532732 -471924 - DOC LINE Jockey -4512 213 17 1 802 657 0 0 0 chrUextra 28532748 28532821 -471835 + (A)n Simple_repeat Simple_repeat 1 73 0 1 802 293 319 37 0 chrUextra 28532822 28532985 -471671 + I_DM LINE I 1321 1489 -4742 1 802 495 0 0 0 chrUextra 28533636 28533689 -470967 - NTS_DM Other Other -187 53 1 1 802 1986 0 17 13 chrUextra 28533689 28533928 -470728 - NTS_DM Other Other 0 240 1 1 802 864 86 26 26 chrUextra 28533928 28534084 -470572 - NTS_DM Other Other 0 240 85 1 802 1515 43 0 0 chrUextra 28534734 28535183 -469473 + (ATAAG)n Simple_repeat Simple_repeat 1 449 0 1 802 3794 25 0 7 chrUextra 28535283 28535732 -468924 - IDEFIX_I LTR Gypsy -4053 1575 1130 1 802 1497 28 0 0 chrUextra 28535832 28536277 -468379 + (CACAA)n Simple_repeat Simple_repeat 1 445 0 1 802 1487 10 96 5 chrUextra 28536930 28537129 -467527 + LINEJ1_DM LINE Jockey 4804 5020 0 1 802 261 0 0 0 chrUextra 28537129 28537158 -467498 + (A)n Simple_repeat Simple_repeat 1 29 0 1 802 1455 27 0 0 chrUextra 28538030 28538475 -466181 + (TCTA)n Simple_repeat Simple_repeat 1 445 0 1 802 2446 97 54 20 chrUextra 28538578 28539022 -465634 - DMSAT6 Satellite Satellite -3 467 9 1 802 2246 134 20 16 chrUextra 28539123 28539570 -465086 - DMSAT6 Satellite Satellite -17 453 5 1 802 1620 0 0 0 chrUextra 28539671 28540053 -464603 + (GAGAA)n Simple_repeat Simple_repeat 1 382 0 1 802 1425 37 0 0 chrUextra 28540220 28540436 -464220 + (CTTAT)n Simple_repeat Simple_repeat 1 216 0 1 802 1257 64 0 0 chrUextra 28540447 28540666 -463990 + (CTTAT)n Simple_repeat Simple_repeat 1 219 0 1 802 2593 84 20 11 chrUextra 28540768 28541215 -463441 + DMSAT6 Satellite Satellite 5 455 -15 1 802 1620 11 0 0 chrUextra 28541316 28541583 -463073 + (TCTA)n Simple_repeat Simple_repeat 1 267 0 1 802 390 69 0 0 chrUextra 28541890 28541948 -462708 + (CGAGA)n Simple_repeat Simple_repeat 3 60 0 1 802 1620 0 0 0 chrUextra 28541949 28542309 -462347 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 802 3259 3 0 0 chrUextra 28542411 28542758 -461898 - TABOR_LTR LTR Gypsy -159 347 1 1 802 474 155 0 0 chrUextra 28542761 28542858 -461798 + CT-rich Low_complexity Low_complexity 3 99 0 1 802 1500 22 0 0 chrUextra 28542962 28543142 -461514 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 330 154 0 0 chrUextra 28543150 28543228 -461428 + GA-rich Low_complexity Low_complexity 4 81 0 1 802 936 131 0 0 chrUextra 28543230 28543405 -461251 + (GAGAA)n Simple_repeat Simple_repeat 4 178 0 1 802 2496 94 18 14 chrUextra 28543511 28543952 -460704 + DMSAT6 Satellite Satellite 9 451 -19 1 802 233 0 0 161 chrUextra 28544057 28544268 -460388 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 802 323 204 39 0 chrUextra 28544270 28544373 -460283 + (CAAA)n Simple_repeat Simple_repeat 4 110 0 1 802 1038 0 0 0 chrUextra 28544376 28544499 -460157 - TABOR_LTR LTR Gypsy 0 506 384 1 802 681 95 0 0 chrUextra 28544600 28544716 -459940 + (TAGA)n Simple_repeat Simple_repeat 4 119 0 1 802 1554 23 0 0 chrUextra 28544733 28545046 -459610 + (TAGA)n Simple_repeat Simple_repeat 1 313 0 1 802 598 155 31 26 chrUextra 28545177 28545528 -459128 + CT-rich Low_complexity Low_complexity 1 353 0 1 802 226 269 0 0 chrUextra 28545536 28545588 -459068 + T-rich Low_complexity Low_complexity 1 52 0 1 802 3171 2 81 60 chrUextra 28545693 28546140 -458516 - ROO_I LTR Pao -7396 860 405 1 802 2486 82 38 20 chrUextra 28546240 28546687 -457969 + DMSAT6 Satellite Satellite 1 455 -15 1 802 4005 2 2 7 chrUextra 28546787 28547233 -457423 - LSU-rRNA_Dme rRNA rRNA -2487 1413 970 1 802 1956 0 17 17 chrUextra 28547341 28547581 -457075 + NTS_DM Other Other 1 240 0 1 802 1759 0 0 0 chrUextra 28547581 28547779 -456877 + NTS_DM Other Other 1 198 -42 1 802 4041 2 5 2 chrUextra 28547879 28548324 -456332 + SSU-rRNA_Dme rRNA rRNA 1139 1584 -411 1 802 606 96 0 0 chrUextra 28548424 28548528 -456128 + (CTTAT)n Simple_repeat Simple_repeat 3 106 0 1 802 617 63 0 10 chrUextra 28548558 28548654 -456002 + (CAGAT)n Simple_repeat Simple_repeat 5 99 0 1 802 987 84 0 17 chrUextra 28548665 28548846 -455810 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 1 802 1533 23 0 2 chrUextra 28548969 28549414 -455242 + (TCTA)n Simple_repeat Simple_repeat 1 443 0 1 802 1169 39 0 42 chrUextra 28549519 28549959 -454697 + (CACAA)n Simple_repeat Simple_repeat 1 421 0 1 802 1260 24 0 18 chrUextra 28550059 28550230 -454426 + (TCTA)n Simple_repeat Simple_repeat 3 170 0 1 802 189 26 79 0 chrUextra 28550241 28550279 -454377 + (CTATG)n Simple_repeat Simple_repeat 1 41 0 1 802 882 67 0 48 chrUextra 28550292 28550479 -454177 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 1 802 379 22 0 160 chrUextra 28550603 28550859 -453797 + CT-rich Low_complexity Low_complexity 1 214 0 1 802 237 3 5 155 chrUextra 28551696 28552088 -452568 + (TTGTG)n Simple_repeat Simple_repeat 1 333 0 1 802 1381 39 0 5 chrUextra 28552777 28553220 -451436 + (TAGA)n Simple_repeat Simple_repeat 1 441 0 1 802 1997 85 18 9 chrUextra 28553321 28553652 -451004 + DMSAT6 Satellite Satellite 105 438 -32 1 802 504 45 0 0 chrUextra 28553863 28553930 -450726 + (TTCTC)n Simple_repeat Simple_repeat 5 71 0 1 802 1764 18 17 22 chrUextra 28554947 28555179 -449477 - NTS_DM Other Other -9 231 1 1 802 1573 19 19 19 chrUextra 28555179 28555389 -449267 - NTS_DM Other Other 0 240 31 1 802 1314 78 0 0 chrUextra 28555489 28555669 -448987 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 1124 111 0 6 chrUextra 28555669 28555850 -448806 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 1 802 579 53 0 0 chrUextra 28555851 28555926 -448730 + (TTTCC)n Simple_repeat Simple_repeat 1 75 0 1 802 1587 6 0 0 chrUextra 28556031 28556211 -448445 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 802 621 106 0 0 chrUextra 28556211 28556324 -448332 + (TTCTC)n Simple_repeat Simple_repeat 5 117 0 1 802 963 25 0 0 chrUextra 28556330 28556448 -448208 + (GAGAA)n Simple_repeat Simple_repeat 1 118 0 1 802 1620 5 0 2 chrUextra 28556573 28557015 -447641 + (GAGAA)n Simple_repeat Simple_repeat 1 441 0 1 802 234 0 0 0 chrUextra 28557115 28557141 -447515 + (TTCTC)n Simple_repeat Simple_repeat 1 26 0 1 802 264 30 0 0 chrUextra 28557141 28557173 -447483 + (CGCTG)n Simple_repeat Simple_repeat 1 33 0 1 802 1620 15 0 0 chrUextra 28557173 28557437 -447219 + (GAGAA)n Simple_repeat Simple_repeat 1 264 0 1 802 952 57 16 59 chrUextra 28557671 28557858 -446798 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 802 636 128 0 53 chrUextra 28557887 28558077 -446579 + GA-rich Low_complexity Low_complexity 1 180 0 1 802 2100 117 16 52 chrUextra 28558738 28559179 -445477 - DMSAT6 Satellite Satellite -34 436 12 1 802 4088 5 0 0 chrUextra 28559819 28560259 -444397 + LSU-rRNA_Dme rRNA rRNA 3057 3496 -404 1 802 1524 59 8 8 chrUextra 28560370 28560730 -443926 + (TTCTC)n Simple_repeat Simple_repeat 1 360 0 1 802 288 69 86 0 chrUextra 28560730 28560788 -443868 + CT-rich Low_complexity Low_complexity 5 67 0 1 802 532 119 36 0 chrUextra 28561040 28561124 -443532 - NTS_DM Other Other -150 90 4 1 802 763 10 0 29 chrUextra 28561234 28561339 -443317 - NTS_DM Other Other -78 162 61 1 802 1509 11 0 0 chrUextra 28561439 28561614 -443042 + (CACAA)n Simple_repeat Simple_repeat 5 179 0 1 802 1476 34 0 0 chrUextra 28561616 28561794 -442862 + (TCTTG)n Simple_repeat Simple_repeat 3 180 0 1 802 689 0 0 12 chrUextra 28561796 28561878 -442778 + (TCTCG)n Simple_repeat Simple_repeat 5 85 0 1 802 1571 12 0 2 chrUextra 28561978 28562417 -442239 + (TTCTC)n Simple_repeat Simple_repeat 1 437 0 1 802 1587 37 0 0 chrUextra 28562518 28562955 -441701 + (CTTAT)n Simple_repeat Simple_repeat 1 437 0 1 802 1701 54 404 0 chrUextra 28564134 28564374 -440282 + G2_DM LINE Jockey 2192 2528 -574 1 802 1035 23 0 0 chrUextra 28564415 28564544 -440112 + G2_DM LINE Jockey 2967 3095 -7 1 802 1276 34 0 10 chrUextra 28565212 28565521 -439135 + (TTATA)n Simple_repeat Simple_repeat 1 305 0 1 802 597 114 0 0 chrUextra 28565535 28565649 -439007 + (TTCTC)n Simple_repeat Simple_repeat 3 116 0 1 802 3448 40 2 18 chrUextra 28566827 28567265 -437391 + Gypsy12_LTR LTR Gypsy 1169 1599 -737 1 802 1620 0 0 0 chrUextra 28567365 28567545 -437111 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 802 1521 17 0 0 chrUextra 28567571 28567803 -436853 + (TCTA)n Simple_repeat Simple_repeat 1 232 0 1 802 460 15 0 137 chrUextra 28567936 28568251 -436405 + (TCTCTG)n Simple_repeat Simple_repeat 1 272 0 1 802 292 23 128 0 chrUextra 28568251 28568337 -436319 + CT-rich Low_complexity Low_complexity 2 98 0 1 802 585 0 0 0 chrUextra 28568441 28568506 -436150 + (ACTAG)n Simple_repeat Simple_repeat 5 69 0 1 802 1620 0 0 0 chrUextra 28568509 28568869 -435787 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 802 2227 110 31 16 chrUextra 28568982 28569407 -435249 + DMSAT6 Satellite Satellite 31 461 -9 1 802 293 12 0 129 chrUextra 28570055 28570148 -434508 + (TTTTTA)n Simple_repeat Simple_repeat 3 83 0 1 802 1620 0 0 0 chrUextra 28570592 28570886 -433770 + (CAAGA)n Simple_repeat Simple_repeat 1 294 0 1 802 3907 2 5 5 chrUextra 28571128 28571564 -433092 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1305 1 802 1269 0 0 0 chrUextra 28571664 28571805 -432851 + (GAGAA)n Simple_repeat Simple_repeat 4 144 0 1 802 1599 2 0 0 chrUextra 28572200 28572636 -432020 + (GAGAA)n Simple_repeat Simple_repeat 1 436 0 1 802 3943 5 0 2 chrUextra 28572736 28573171 -431485 - R1_DM LINE R1 -171 5185 4752 1 803 1620 0 0 0 chrUextra 28573806 28574210 -430446 + (GAGAA)n Simple_repeat Simple_repeat 1 404 0 1 803 1587 32 9 31 chrUextra 28574341 28574567 -430089 - NTS_DM Other Other -19 221 1 1 803 1538 20 19 24 chrUextra 28574567 28574776 -429880 - NTS_DM Other Other 0 240 33 1 803 476 45 0 137 chrUextra 28574885 28575090 -429566 + T-rich Low_complexity Low_complexity 2 178 0 1 803 687 114 30 34 chrUextra 28575413 28575650 -429006 + CT-rich Low_complexity Low_complexity 1 235 0 1 803 1408 22 0 11 chrUextra 28575650 28575832 -428824 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1016 93 0 7 chrUextra 28576230 28576381 -428275 + (TCTCC)n Simple_repeat Simple_repeat 3 152 0 1 803 612 90 74 15 chrUextra 28577016 28577345 -427311 + GA-rich Low_complexity Low_complexity 1 348 0 1 803 1620 0 0 0 chrUextra 28578094 28578274 -426382 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1488 24 0 0 chrUextra 28578619 28578875 -425781 + (CATAG)n Simple_repeat Simple_repeat 1 256 0 1 803 1263 57 0 0 chrUextra 28578875 28579052 -425604 + (AATAG)n Simple_repeat Simple_repeat 3 179 0 1 803 725 0 0 12 chrUextra 28579152 28579238 -425418 + (GAGAA)n Simple_repeat Simple_repeat 2 86 0 1 803 1620 9 0 2 chrUextra 28579689 28580118 -424538 + (TTCTCC)n Simple_repeat Simple_repeat 1 428 0 1 803 248 131 234 0 chrUextra 28580301 28580438 -424218 + (CTAAA)n Simple_repeat Simple_repeat 5 173 0 1 803 288 333 0 0 chrUextra 28580454 28580628 -424028 + (TAAG)n Simple_repeat Simple_repeat 4 177 0 1 803 449 34 17 0 chrUextra 28580755 28580814 -423842 + (TTCTC)n Simple_repeat Simple_repeat 5 64 0 1 803 614 142 56 6 chrUextra 28580827 28581168 -423488 + GA-rich Low_complexity Low_complexity 1 357 0 1 803 519 31 0 0 chrUextra 28581817 28581882 -422774 + (TTCTC)n Simple_repeat Simple_repeat 5 69 0 1 803 1620 16 0 0 chrUextra 28581882 28582249 -422407 + (GAGAA)n Simple_repeat Simple_repeat 1 367 0 1 803 1488 30 0 0 chrUextra 28582351 28582781 -421875 + (CACAA)n Simple_repeat Simple_repeat 1 430 0 1 803 1620 26 0 0 chrUextra 28582881 28583299 -421357 + (TTCTC)n Simple_repeat Simple_repeat 1 418 0 1 803 214 17 20 139 chrUextra 28583423 28583624 -421032 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 1 803 879 102 0 0 chrUextra 28583672 28583800 -420856 + (TTGTG)n Simple_repeat Simple_repeat 3 130 0 1 803 315 71 0 0 chrUextra 28583802 28583844 -420812 + (CTACG)n Simple_repeat Simple_repeat 4 45 0 1 803 1041 119 0 0 chrUextra 28583947 28584375 -420281 + (CATGT)n Simple_repeat Simple_repeat 1 428 0 1 803 1620 0 0 0 chrUextra 28584492 28584672 -419984 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 803 1578 5 0 0 chrUextra 28584684 28584906 -419750 + (AGATG)n Simple_repeat Simple_repeat 1 222 0 1 803 384 40 0 0 chrUextra 28585006 28585056 -419600 + (TTCTC)n Simple_repeat Simple_repeat 1 50 0 1 803 1599 15 0 0 chrUextra 28585085 28585417 -419239 + (GAGAA)n Simple_repeat Simple_repeat 1 332 0 1 803 1355 34 0 6 chrUextra 28586072 28586250 -418406 + (ATAAG)n Simple_repeat Simple_repeat 1 177 0 1 803 1449 36 0 0 chrUextra 28586272 28586498 -418158 + (ATAAG)n Simple_repeat Simple_repeat 1 226 0 1 803 426 0 0 0 chrUextra 28586600 28586647 -418009 - TABOR_LTR LTR Gypsy -459 47 1 1 803 694 0 0 0 chrUextra 28586645 28586748 -417908 - TABOR_I LTR Gypsy 0 6336 6234 1 803 22 35 0 0 chrUextra 28586748 28586777 -417879 + AT_rich Low_complexity Low_complexity 1 29 0 1 803 288 0 0 0 chrUextra 28586865 28586897 -417759 + (T)n Simple_repeat Simple_repeat 1 32 0 1 803 1620 16 0 0 chrUextra 28587130 28587380 -417276 + (TTCTC)n Simple_repeat Simple_repeat 1 250 0 1 803 1084 60 0 12 chrUextra 28587390 28587558 -417098 + (GAGAA)n Simple_repeat Simple_repeat 2 167 0 1 803 1462 22 0 0 chrUextra 28587658 28587840 -416816 + FW_DM LINE Jockey 4511 4692 0 1 803 180 0 0 0 chrUextra 28587840 28587860 -416796 + (A)n Simple_repeat Simple_repeat 1 20 0 1 803 1620 7 0 0 chrUextra 28588189 28588617 -416039 + (TTGTG)n Simple_repeat Simple_repeat 1 428 0 1 803 1887 188 19 7 chrUextra 28588725 28589144 -415512 - SAR_DM Satellite Satellite -411 1061 638 1 803 3795 5 0 7 chrUextra 28589246 28589675 -414981 - R1_DM LINE R1 -3637 1719 1294 1 803 953 65 5 14 chrUextra 28589775 28590204 -414452 + RSP Satellite Satellite 1 425 0 1 803 3402 28 5 5 chrUextra 28590304 28590733 -413923 - BURDOCK_I LTR Gypsy -536 5324 4896 1 803 1825 196 9 12 chrUextra 28590833 28591262 -413394 - SAR_DM Satellite Satellite -396 1076 649 1 803 1464 39 0 0 chrUextra 28591362 28591541 -413115 + (TCTTG)n Simple_repeat Simple_repeat 2 180 0 1 803 1620 0 0 0 chrUextra 28591548 28591728 -412928 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 803 376 34 0 33 chrUextra 28591731 28591791 -412865 + (TATCG)n Simple_repeat Simple_repeat 3 60 0 1 803 2301 97 7 37 chrUextra 28591891 28592319 -412337 - DMSAT6 Satellite Satellite -39 431 17 1 803 219 36 0 0 chrUextra 28592421 28592449 -412207 + (TTCTC)n Simple_repeat Simple_repeat 4 31 0 1 803 650 134 40 23 chrUextra 28592484 28592660 -411996 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 804 104 40 17 chrUextra 28592672 28592848 -411808 + GA-rich Low_complexity Low_complexity 1 180 0 1 803 346 10 136 0 chrUextra 28592997 28593100 -411556 + (TC)n Simple_repeat Simple_repeat 2 118 0 1 803 565 142 59 6 chrUextra 28593088 28593258 -411398 + CT-rich Low_complexity Low_complexity 1 179 0 1 803 359 126 47 28 chrUextra 28593272 28593378 -411278 + CT-rich Low_complexity Low_complexity 2 109 0 1 803 2196 12 108 5 chrUextra 28593478 28593906 -410750 + FW_DM LINE Jockey 1731 2202 -2490 1 803 1587 8 0 0 chrUextra 28594539 28594947 -409709 + (TTCTCC)n Simple_repeat Simple_repeat 1 408 0 1 803 3417 5 0 16 chrUextra 28595062 28595490 -409166 - ROO_I LTR Pao -161 8095 7675 1 803 334 0 7 131 chrUextra 28595593 28595738 -408918 + (CAGAGA)n Simple_repeat Simple_repeat 6 132 0 1 803 577 142 59 6 chrUextra 28595729 28595899 -408757 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 436 0 137 0 chrUextra 28595894 28596018 -408638 + (GA)n Simple_repeat Simple_repeat 2 142 0 1 803 1202 43 0 0 chrUextra 28596118 28596282 -408374 + DOC LINE Jockey 4562 4725 0 1 803 189 0 0 0 chrUextra 28596282 28596303 -408353 + (A)n Simple_repeat Simple_repeat 1 21 0 1 803 698 270 8 4 chrUextra 28596304 28596546 -408110 + Copia_I LTR Copia 1527 1769 -2824 1 803 2479 101 26 2 chrUextra 28596646 28597071 -407585 - DMSAT6 Satellite Satellite -19 451 17 1 803 1587 29 0 0 chrUextra 28597186 28597466 -407190 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 803 617 92 69 0 chrUextra 28597467 28597598 -407058 + GA-rich Low_complexity Low_complexity 5 144 0 1 803 1587 8 0 0 chrUextra 28597702 28597938 -406718 + (TAGA)n Simple_repeat Simple_repeat 1 236 0 1 803 1014 97 0 0 chrUextra 28597938 28598112 -406544 + (ATCG)n Simple_repeat Simple_repeat 2 176 0 1 803 483 13 88 44 chrUextra 28598230 28598390 -406266 + (GA)n Simple_repeat Simple_repeat 2 168 0 1 803 590 151 41 16 chrUextra 28598415 28598656 -406000 + GA-rich Low_complexity Low_complexity 1 246 0 1 803 782 12 0 0 chrUextra 28598758 28598843 -405813 - NTS_DM Other Other -155 85 1 1 803 1728 47 17 17 chrUextra 28598843 28599083 -405573 - NTS_DM Other Other 0 240 1 1 803 308 113 68 40 chrUextra 28599086 28599160 -405496 - NTS_DM Other Other -3 237 162 1 803 1191 181 7 12 chrUextra 28599286 28599505 -405151 + SAR_DM Satellite Satellite 1 345 -632 1 803 994 120 0 0 chrUextra 28599505 28599663 -404993 - ARS406_DM Unknown Unknown -195 158 1 1 803 1191 181 7 12 chrUextra 28599663 28599708 -404948 + SAR_DM Satellite Satellite 346 419 -558 1 803 3467 24 2 5 chrUextra 28599813 28600240 -404416 + ROO_I LTR Pao 4606 5031 -3225 1 803 2069 122 26 26 chrUextra 28600344 28600766 -403890 - DMSAT6 Satellite Satellite -48 422 1 1 803 292 148 136 0 chrUextra 28601568 28601723 -402933 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 1 803 1347 45 0 0 chrUextra 28601921 28602100 -402556 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 803 354 100 0 0 chrUextra 28602100 28602160 -402496 + (TTCTG)n Simple_repeat Simple_repeat 2 61 0 1 803 1540 0 0 11 chrUextra 28602161 28602343 -402313 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 3834 9 2 2 chrUextra 28602447 28602873 -401783 - SSU-rRNA_Dme rRNA rRNA -731 1264 839 1 803 1302 78 0 0 chrUextra 28604026 28604206 -400450 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 996 124 11 11 chrUextra 28604209 28604388 -400268 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1 803 329 145 16 0 chrUextra 28604388 28604450 -400206 + CT-rich Low_complexity Low_complexity 3 65 0 1 803 1082 23 0 8 chrUextra 28604841 28604975 -399681 + (CAAGA)n Simple_repeat Simple_repeat 2 134 0 1 803 1620 3 0 0 chrUextra 28605075 28605405 -399251 + (TTCTC)n Simple_repeat Simple_repeat 1 330 0 1 803 219 36 0 0 chrUextra 28605405 28605433 -399223 + (CAGCT)n Simple_repeat Simple_repeat 2 29 0 1 803 585 0 0 0 chrUextra 28605435 28605500 -399156 + (GAGAA)n Simple_repeat Simple_repeat 5 69 0 1 803 1620 0 0 0 chrUextra 28605604 28605806 -398850 + (GAGAA)n Simple_repeat Simple_repeat 1 202 0 1 803 1344 10 0 43 chrUextra 28605815 28606025 -398631 + (TATAA)n Simple_repeat Simple_repeat 1 201 0 1 803 1547 47 0 2 chrUextra 28606142 28606550 -398106 + (CTTAT)n Simple_repeat Simple_repeat 1 406 0 1 803 34 24 0 0 chrUextra 28606867 28606908 -397748 + AT_rich Low_complexity Low_complexity 1 41 0 1 803 3682 2 2 2 chrUextra 28607175 28607600 -397056 - ROO_I LTR Pao -4751 3505 3081 1 803 342 138 0 0 chrUextra 28607701 28607759 -396897 + (CTG)n Simple_repeat Simple_repeat 2 59 0 1 803 2577 27 0 74 chrUextra 28607759 28608125 -396531 - ROO_I LTR Pao -7618 638 300 1 803 417 176 66 0 chrUextra 28608225 28608361 -396295 + T-rich Low_complexity Low_complexity 2 146 0 1 803 555 121 59 24 chrUextra 28608362 28608531 -396125 + CT-rich Low_complexity Low_complexity 5 179 0 1 803 333 0 0 0 chrUextra 28608750 28608787 -395869 + (TTCTC)n Simple_repeat Simple_repeat 5 41 0 1 803 1620 8 0 0 chrUextra 28608801 28609161 -395495 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 803 1620 5 0 2 chrUextra 28609799 28610206 -394450 + (TTCTCC)n Simple_repeat Simple_repeat 1 406 0 1 803 1997 188 5 9 chrUextra 28610323 28610747 -393909 - SAR_DM Satellite Satellite -535 937 516 1 803 1314 81 0 0 chrUextra 28610857 28611271 -393385 + (TTCTC)n Simple_repeat Simple_repeat 1 414 0 1 803 534 16 0 0 chrUextra 28611371 28611434 -393222 + (TTCTC)n Simple_repeat Simple_repeat 2 64 0 1 803 1506 48 0 0 chrUextra 28611443 28611795 -392861 + (GAGAA)n Simple_repeat Simple_repeat 1 352 0 1 803 458 17 17 0 chrUextra 28611895 28611955 -392701 + NTS_DM Other Other 73 133 -107 1 803 813 31 0 0 chrUextra 28611955 28612051 -392605 + NTS_DM Other Other 38 133 -107 1 803 1461 40 20 20 chrUextra 28612051 28612254 -392402 + NTS_DM Other Other 38 240 0 1 803 535 47 0 0 chrUextra 28612254 28612318 -392338 + NTS_DM Other Other 1 64 -176 1 803 678 171 41 0 chrUextra 28612420 28612543 -392113 - IDEFIX_I LTR Gypsy -701 4927 4800 1 803 1518 138 96 10 chrUextra 28612548 28612841 -391815 - MDG1_LTR LTR Gypsy -30 412 95 1 803 588 14 0 0 chrUextra 28612941 28613010 -391646 + (TTCTC)n Simple_repeat Simple_repeat 1 69 0 1 803 1599 6 0 0 chrUextra 28613019 28613339 -391317 + (GAGAA)n Simple_repeat Simple_repeat 1 320 0 1 803 449 164 0 0 chrUextra 28613464 28613582 -391074 + (CAGAGA)n Simple_repeat Simple_repeat 1 118 0 1 803 233 0 0 161 chrUextra 28613595 28613806 -390850 + (CAAGA)n Simple_repeat Simple_repeat 2 178 0 1 803 465 139 0 25 chrUextra 28613806 28613887 -390769 + A-rich Low_complexity Low_complexity 4 82 0 1 803 963 93 0 0 chrUextra 28613988 28614150 -390506 + (CGAT)n Simple_repeat Simple_repeat 3 164 0 1 803 1620 8 0 4 chrUextra 28614150 28614410 -390246 + (TCTA)n Simple_repeat Simple_repeat 1 259 0 1 803 1810 10 0 0 chrUextra 28614510 28614707 -389949 + LSU-rRNA_Dme rRNA rRNA 3704 3900 0 1 803 266 196 0 19 chrUextra 28614808 28614860 -389796 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 803 1050 93 0 5 chrUextra 28615038 28615449 -389207 + (CGAAG)n Simple_repeat Simple_repeat 1 408 0 1 803 603 191 0 0 chrUextra 28615554 28615711 -388945 + (CTATT)n Simple_repeat Simple_repeat 3 159 0 1 803 319 160 42 11 chrUextra 28616606 28616701 -387955 + CT-rich Low_complexity Low_complexity 2 99 0 1 803 1620 6 0 0 chrUextra 28617669 28617993 -386663 + (GAGAA)n Simple_repeat Simple_repeat 1 324 0 1 803 1386 12 0 0 chrUextra 28618164 28618324 -386332 + (TTGTG)n Simple_repeat Simple_repeat 3 162 0 1 803 861 77 226 16 chrUextra 28618325 28618568 -386088 - PROTOP_B DNA P -507 646 353 1 803 1620 8 0 0 chrUextra 28618686 28619080 -385576 + (GAGAA)n Simple_repeat Simple_repeat 1 394 0 1 803 1620 0 0 0 chrUextra 28619729 28619936 -384720 + (TAGA)n Simple_repeat Simple_repeat 1 207 0 1 803 279 259 0 0 chrUextra 28619960 28620126 -384530 + (TAGA)n Simple_repeat Simple_repeat 1 166 0 1 803 2482 82 17 12 chrUextra 28620253 28620671 -383985 - DMSAT6 Satellite Satellite -29 441 22 1 803 822 34 10 101 chrUextra 28620772 28620970 -383686 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 206 154 0 25 chrUextra 28620973 28620993 -383663 + polypurine Low_complexity Low_complexity 5 24 0 1 803 1319 45 0 6 chrUextra 28620993 28621173 -383483 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 803 206 154 0 25 chrUextra 28621173 28621192 -383464 + polypurine Low_complexity Low_complexity 25 43 0 1 803 1620 17 0 0 chrUextra 28621292 28621713 -382943 + (GAGAA)n Simple_repeat Simple_repeat 1 421 0 1 803 3719 0 0 2 chrUextra 28622334 28622734 -381922 - LSU-rRNA_Dme rRNA rRNA -1714 2186 1788 1 803 444 19 0 0 chrUextra 28623894 28623947 -380709 + (TTCTC)n Simple_repeat Simple_repeat 5 57 0 1 803 1620 9 0 0 chrUextra 28623956 28624296 -380360 + (GAGAA)n Simple_repeat Simple_repeat 1 340 0 1 803 1620 51 0 0 chrUextra 28624936 28625354 -379302 + (TTCTC)n Simple_repeat Simple_repeat 1 418 0 1 803 1620 0 0 0 chrUextra 28625993 28626353 -378303 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 803 642 55 102 0 chrUextra 28628054 28628467 -376189 + (TTA)n Simple_repeat Simple_repeat 1 454 0 1 803 480 249 12 3 chrUextra 28628569 28628907 -375749 + (CAAA)n Simple_repeat Simple_repeat 1 340 0 1 803 951 27 0 9 chrUextra 28629605 28629717 -374939 + ACCORD2_I LTR Gypsy 1257 1367 -5845 1 803 874 37 65 124 chrUextra 28629791 28629977 -374679 + ACCORD2_I LTR Gypsy 1507 1681 -5531 1 803 270 79 53 0 chrUextra 28629985 28630023 -374633 + Gypsy12_I LTR Gypsy 4446 4485 -1061 1 803 510 0 58 23 chrUextra 28630123 28630210 -374446 + (TAA)n Simple_repeat Simple_repeat 3 92 0 1 803 2503 16 0 21 chrUextra 28630210 28630540 -374116 - HMSBEAGLE_I LTR Gypsy -5733 796 474 1 803 1481 32 0 2 chrUextra 28630640 28631053 -373603 + (CACAA)n Simple_repeat Simple_repeat 1 411 0 1 803 1545 31 0 0 chrUextra 28631157 28631540 -373116 + (CACAT)n Simple_repeat Simple_repeat 1 383 0 1 803 2467 75 27 2 chrUextra 28631674 28632078 -372578 + DMSAT6 Satellite Satellite 29 442 -28 1 803 971 77 0 6 chrUextra 28632191 28632347 -372309 + (TTCTC)n Simple_repeat Simple_repeat 5 159 0 1 803 855 0 0 0 chrUextra 28632347 28632442 -372214 + (ATCTG)n Simple_repeat Simple_repeat 2 96 0 1 803 1050 55 0 18 chrUextra 28632442 28632608 -372048 + (GAGAA)n Simple_repeat Simple_repeat 1 163 0 1 803 1136 41 0 7 chrUextra 28633224 28633371 -371285 + (CAAGA)n Simple_repeat Simple_repeat 1 146 0 1 803 1029 57 0 0 chrUextra 28633396 28633537 -371119 + (CAAGA)n Simple_repeat Simple_repeat 2 142 0 1 803 1314 50 0 0 chrUextra 28634256 28634435 -370221 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 803 1400 39 0 4 chrUextra 28634435 28634667 -369989 + (ATAAG)n Simple_repeat Simple_repeat 1 231 0 1 803 1955 183 10 7 chrUextra 28634775 28635187 -369469 - SAR_DM Satellite Satellite -514 958 546 1 803 387 0 0 0 chrUextra 28635287 28635330 -369326 + (TTCTC)n Simple_repeat Simple_repeat 3 45 0 1 803 450 0 0 0 chrUextra 28635330 28635379 -369277 + (CGCTG)n Simple_repeat Simple_repeat 1 50 0 1 803 1448 39 0 3 chrUextra 28635382 28635702 -368954 + (AGATG)n Simple_repeat Simple_repeat 1 318 0 1 803 1620 2 0 0 chrUextra 28635804 28636208 -368448 + (TCTA)n Simple_repeat Simple_repeat 1 404 0 1 803 385 0 0 167 chrUextra 28636320 28636536 -368120 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 803 344 0 0 161 chrUextra 28636549 28636729 -367927 + (CATCT)n Simple_repeat Simple_repeat 1 151 0 1 803 2340 10 75 10 chrUextra 28636832 28637125 -367531 - PROTOP_A DNA P -163 942 631 1 803 878 21 0 0 chrUextra 28637123 28637220 -367436 - PROTOP_A DNA P -1008 97 1 1 803 254 0 0 0 chrUextra 28637220 28637247 -367409 + PROTOP_B DNA P 26 52 -1101 1 803 1888 184 17 10 chrUextra 28637350 28637761 -366895 - SAR_DM Satellite Satellite -513 959 546 1 803 1557 20 0 2 chrUextra 28637863 28638276 -366380 + (TCTTG)n Simple_repeat Simple_repeat 1 411 0 1 803 1547 10 0 7 chrUextra 28638376 28638790 -365866 + (TCTA)n Simple_repeat Simple_repeat 1 410 0 1 803 577 142 59 6 chrUextra 28638891 28639061 -365595 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 546 0 136 0 chrUextra 28639056 28639210 -365446 + (GA)n Simple_repeat Simple_repeat 2 176 0 1 803 1419 6 0 0 chrUextra 28639404 28639564 -365092 + (TTATA)n Simple_repeat Simple_repeat 1 160 0 1 803 2197 8 0 4 chrUextra 28639574 28639818 -364838 + FW_DM LINE Jockey 1 243 -4449 1 803 36 0 0 0 chrUextra 28640432 28640468 -364188 + AT_rich Low_complexity Low_complexity 1 36 0 1 803 223 37 0 0 chrUextra 28640439 28640739 -363917 + AT_rich Low_complexity Low_complexity 1 300 0 1 803 257 14 0 0 chrUextra 28640561 28640846 -363810 + AT_rich Low_complexity Low_complexity 1 285 0 1 803 723 156 0 0 chrUextra 28640951 28641130 -363526 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 1 803 222 163 0 39 chrUextra 28641130 28641161 -363495 + polypurine Low_complexity Low_complexity 4 32 0 1 803 1044 151 0 0 chrUextra 28641161 28641340 -363316 + GA-rich Low_complexity Low_complexity 2 180 0 1 803 222 163 0 39 chrUextra 28641340 28641359 -363297 + polypurine Low_complexity Low_complexity 33 51 0 1 803 1620 0 0 0 chrUextra 28641463 28641823 -362833 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 803 1620 70 0 3 chrUextra 28641972 28642330 -362326 + (GAGAA)n Simple_repeat Simple_repeat 1 356 0 1 803 223 236 0 0 chrUextra 28642330 28642385 -362271 + (AGATG)n Simple_repeat Simple_repeat 3 57 0 1 803 1798 162 10 29 chrUextra 28642489 28642897 -361759 + SAR_DM Satellite Satellite 641 1040 -432 1 803 657 0 0 0 chrUextra 28643016 28643089 -361567 + (GAGAA)n Simple_repeat Simple_repeat 3 75 0 1 803 553 31 0 0 chrUextra 28643859 28643924 -360732 - SSU-rRNA_Dme rRNA rRNA 0 1995 1931 1 803 1554 15 0 0 chrUextra 28644024 28644436 -360220 + (CTATT)n Simple_repeat Simple_repeat 1 412 0 1 803 1244 73 0 7 chrUextra 28644536 28644843 -359813 + (ATAAG)n Simple_repeat Simple_repeat 1 304 0 1 803 440 60 30 0 chrUextra 28644881 28644948 -359708 + (ATAAG)n Simple_repeat Simple_repeat 4 72 0 1 803 1488 22 0 0 chrUextra 28645564 28645744 -358912 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1164 73 0 0 chrUextra 28645758 28645935 -358721 + (GAGAA)n Simple_repeat Simple_repeat 3 179 0 1 803 206 118 0 0 chrUextra 28645935 28645969 -358687 + (AGATG)n Simple_repeat Simple_repeat 4 37 0 1 803 1620 34 0 0 chrUextra 28646082 28646439 -358217 + (ACTTG)n Simple_repeat Simple_repeat 1 357 0 1 803 336 24 0 0 chrUextra 28646442 28646483 -358173 + (ACATG)n Simple_repeat Simple_repeat 5 45 0 1 803 402 39 0 0 chrUextra 28646584 28646636 -358020 + (TTCTC)n Simple_repeat Simple_repeat 3 54 0 1 803 1620 12 0 0 chrUextra 28646656 28646995 -357661 + (GAGAA)n Simple_repeat Simple_repeat 1 339 0 1 803 823 56 10 88 chrUextra 28647113 28647307 -357349 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 1620 0 0 0 chrUextra 28647326 28647506 -357150 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1479 37 0 2 chrUextra 28647611 28648017 -356639 + (CATCT)n Simple_repeat Simple_repeat 1 405 0 1 803 621 0 0 0 chrUextra 28649137 28649206 -355450 + (TTCTC)n Simple_repeat Simple_repeat 3 71 0 1 803 216 0 0 0 chrUextra 28649206 28649230 -355426 + (AGCTG)n Simple_repeat Simple_repeat 1 24 0 1 803 1620 19 0 0 chrUextra 28649230 28649547 -355109 + (GAGAA)n Simple_repeat Simple_repeat 1 317 0 1 803 1907 192 10 7 chrUextra 28649647 28650056 -354600 - SAR_DM Satellite Satellite -711 761 352 1 803 360 10 0 133 chrUextra 28650159 28650279 -354377 + (TTTTTG)n Simple_repeat Simple_repeat 2 105 0 1 803 531 0 0 0 chrUextra 28650667 28650726 -353930 + (GAGAA)n Simple_repeat Simple_repeat 2 60 0 1 803 2052 90 88 27 chrUextra 28651178 28651587 -353069 + DMSAT6 Satellite Satellite 27 460 -10 1 803 1351 72 2 10 chrUextra 28651687 28652096 -352560 + (CTTAT)n Simple_repeat Simple_repeat 1 405 0 1 803 1620 3 0 0 chrUextra 28652196 28652505 -352151 + (TAGA)n Simple_repeat Simple_repeat 1 309 0 1 803 459 113 0 0 chrUextra 28652532 28652603 -352053 + (ATCG)n Simple_repeat Simple_repeat 2 72 0 1 803 1620 0 0 0 chrUextra 28652705 28652929 -351727 + (GAGAA)n Simple_repeat Simple_repeat 1 224 0 1 803 1611 15 0 5 chrUextra 28653222 28653621 -351035 + (TTCTC)n Simple_repeat Simple_repeat 1 397 0 1 803 1599 10 0 2 chrUextra 28653723 28654118 -350538 + (GAGAA)n Simple_repeat Simple_repeat 1 394 0 1 803 3342 17 5 5 chrUextra 28654232 28654640 -350016 - STALKER4_I LTR Gypsy -4951 1579 1172 1 803 1488 22 0 0 chrUextra 28654756 28654936 -349720 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 237 33 0 0 chrUextra 28654936 28654966 -349690 + (ATAAG)n Simple_repeat Simple_repeat 2 31 0 1 803 1104 89 0 0 chrUextra 28654966 28655146 -349510 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1557 42 0 0 chrUextra 28655248 28655656 -349000 + (TTCTC)n Simple_repeat Simple_repeat 1 408 0 1 803 3737 2 0 0 chrUextra 28655756 28656164 -348492 - DOC LINE Jockey -1106 3619 3212 1 803 1146 83 0 0 chrUextra 28656275 28656672 -347984 + (TTCTC)n Simple_repeat Simple_repeat 1 397 0 1 803 222 0 11 124 chrUextra 28656775 28656864 -347792 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 1 803 524 144 56 4 chrUextra 28656862 28657117 -347539 + GA-rich Low_complexity Low_complexity 1 268 0 1 803 1620 30 2 0 chrUextra 28657280 28657683 -346973 + (CTATT)n Simple_repeat Simple_repeat 1 404 0 1 803 1132 62 12 24 chrUextra 28657822 28657986 -346670 - NTS_DM Other Other -78 162 1 1 803 1624 24 19 14 chrUextra 28657986 28658195 -346461 - NTS_DM Other Other 0 240 31 1 803 3674 7 0 2 chrUextra 28658295 28658702 -345954 - R1_DM LINE R1 -3520 1836 1431 1 803 1611 10 2 0 chrUextra 28658806 28659209 -345447 + (GAGAA)n Simple_repeat Simple_repeat 1 404 0 1 803 277 176 0 19 chrUextra 28659357 28659409 -345247 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 803 266 196 0 19 chrUextra 28659440 28659492 -345164 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 803 266 196 0 19 chrUextra 28659532 28659584 -345072 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 803 285 0 0 0 chrUextra 28659685 28659716 -344940 - LSU-rRNA_Dme rRNA rRNA 0 3900 3870 1 803 1620 22 0 5 chrUextra 28659816 28660222 -344434 + (TCTA)n Simple_repeat Simple_repeat 1 403 0 1 803 1452 57 0 0 chrUextra 28660322 28660728 -343928 + (CTTAT)n Simple_repeat Simple_repeat 1 406 0 1 803 1211 11 0 55 chrUextra 28662345 28662750 -341906 + (GAGAA)n Simple_repeat Simple_repeat 1 382 0 1 803 1338 45 0 0 chrUextra 28662850 28663028 -341628 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 1 803 645 25 0 0 chrUextra 28663028 28663107 -341549 + (ATCG)n Simple_repeat Simple_repeat 3 81 0 1 803 984 68 0 0 chrUextra 28663109 28663255 -341401 + (TCTA)n Simple_repeat Simple_repeat 4 149 0 1 803 1620 0 0 0 chrUextra 28663860 28664092 -340564 + (C)n Simple_repeat Simple_repeat 1 232 0 1 803 468 67 0 110 chrUextra 28664093 28664211 -340445 + C-rich Low_complexity Low_complexity 1 105 0 1 803 784 116 74 53 chrUextra 28664364 28664760 -339896 + DM176_I LTR Gypsy 295 671 -5749 1 803 395 0 0 162 chrUextra 28664934 28665270 -339386 + (CTATG)n Simple_repeat Simple_repeat 1 281 0 1 803 1536 42 0 2 chrUextra 28665372 28665776 -338880 + (CTTAT)n Simple_repeat Simple_repeat 1 402 0 1 803 552 130 64 12 chrUextra 28665878 28666049 -338607 + CT-rich Low_complexity Low_complexity 1 180 0 1 803 427 161 40 35 chrUextra 28666077 28666251 -338405 + CT-rich Low_complexity Low_complexity 5 179 0 1 803 1095 44 0 0 chrUextra 28666380 28666517 -338139 + (CAATA)n Simple_repeat Simple_repeat 5 141 0 1 803 1506 22 0 0 chrUextra 28666884 28667062 -337594 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 803 897 116 0 0 chrUextra 28667079 28667252 -337404 + (CAGAA)n Simple_repeat Simple_repeat 2 174 0 1 803 297 0 0 0 chrUextra 28667254 28667287 -337369 + (CAGAC)n Simple_repeat Simple_repeat 2 34 0 1 803 462 36 0 0 chrUextra 28667387 28667443 -337213 + (TTCTC)n Simple_repeat Simple_repeat 1 56 0 1 803 579 15 0 0 chrUextra 28668393 28668461 -336195 + (TTCTC)n Simple_repeat Simple_repeat 2 69 0 1 803 1620 6 0 0 chrUextra 28668469 28668794 -335862 + (GAGAA)n Simple_repeat Simple_repeat 1 325 0 1 803 1620 0 0 0 chrUextra 28668896 28669197 -335459 + (TAGA)n Simple_repeat Simple_repeat 1 301 0 1 803 339 25 0 0 chrUextra 28669255 28669295 -335361 + (ATCG)n Simple_repeat Simple_repeat 2 41 0 1 803 1533 15 0 2 chrUextra 28669402 28669802 -334854 + (CATCT)n Simple_repeat Simple_repeat 1 399 0 1 803 1620 0 0 0 chrUextra 28669903 28670083 -334573 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 803 1191 72 0 0 chrUextra 28670409 28670589 -334067 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 294 50 0 0 chrUextra 28670589 28670629 -334027 + (CAGAA)n Simple_repeat Simple_repeat 1 40 0 1 803 1347 45 0 0 chrUextra 28670629 28670808 -333848 + (CAGAC)n Simple_repeat Simple_repeat 1 179 0 1 803 264 67 0 132 chrUextra 28670911 28671032 -333624 + A-rich Low_complexity Low_complexity 4 108 0 1 803 370 79 0 141 chrUextra 28671059 28671265 -333391 + A-rich Low_complexity Low_complexity 4 180 0 1 803 1521 14 0 0 chrUextra 28671410 28671629 -333027 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 803 518 160 0 7 chrUextra 28671631 28671782 -332874 + GA-rich Low_complexity Low_complexity 3 152 0 1 803 379 155 18 96 chrUextra 28672414 28672805 -331851 + GA-rich Low_complexity Low_complexity 1 360 0 1 803 1521 17 0 0 chrUextra 28672919 28673099 -331557 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 365 119 48 19 chrUextra 28673129 28673232 -331424 + GA-rich Low_complexity Low_complexity 5 110 0 1 803 770 162 57 57 chrUextra 28673422 28673599 -331057 - Gypsy_I LTR Gypsy -5897 610 434 1 803 659 189 6 23 chrUextra 28673597 28673770 -330886 + G_DM LINE Jockey 4092 4261 -85 1 803 1111 88 0 14 chrUextra 28674430 28674713 -329943 + (AATAG)n Simple_repeat Simple_repeat 1 278 0 1 803 873 19 0 0 chrUextra 28674719 28674822 -329834 + (GAGAA)n Simple_repeat Simple_repeat 2 104 0 1 803 1421 73 5 5 chrUextra 28674922 28675321 -329335 + (AATAG)n Simple_repeat Simple_repeat 1 399 0 1 803 1620 11 0 0 chrUextra 28675936 28676295 -328361 + (GAGAA)n Simple_repeat Simple_repeat 1 359 0 1 803 208 132 132 0 chrUextra 28676433 28676516 -328140 + (CTTG)n Simple_repeat Simple_repeat 2 95 0 1 803 563 17 0 137 chrUextra 28676546 28676751 -327905 + A-rich Low_complexity Low_complexity 2 178 0 1 803 227 158 132 0 chrUextra 28676703 28676817 -327839 + (CAAA)n Simple_repeat Simple_repeat 3 131 0 1 803 357 0 0 136 chrUextra 28676922 28677076 -327580 + (CAGAGA)n Simple_repeat Simple_repeat 6 138 0 1 803 546 0 136 0 chrUextra 28677090 28677244 -327412 + (GA)n Simple_repeat Simple_repeat 2 176 0 1 803 3655 0 0 2 chrUextra 28677919 28678318 -326338 + LSU-rRNA_Dme rRNA rRNA 688 1085 -2815 1 803 1276 45 0 11 chrUextra 28678419 28678601 -326055 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 191 61 0 29 chrUextra 28678601 28678621 -326035 + (CTTAT)n Simple_repeat Simple_repeat 2 21 0 1 803 1309 39 0 11 chrUextra 28678621 28678803 -325853 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 191 61 0 29 chrUextra 28678803 28678816 -325840 + (CTTAT)n Simple_repeat Simple_repeat 2 14 0 1 803 1187 70 6 0 chrUextra 28679919 28680090 -324566 + (TTCTC)n Simple_repeat Simple_repeat 1 172 0 1 803 2425 75 10 20 chrUextra 28680410 28680806 -323850 - DMSAT6 Satellite Satellite -39 431 40 1 803 387 56 0 0 chrUextra 28680908 28680962 -323694 + (TTCTC)n Simple_repeat Simple_repeat 5 58 0 1 803 1121 50 5 38 chrUextra 28680986 28681171 -323485 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 803 609 84 60 22 chrUextra 28681171 28681305 -323351 + GA-rich Low_complexity Low_complexity 3 141 0 1 803 273 79 199 21 chrUextra 28681409 28681801 -322855 + (ATATG)n Simple_repeat Simple_repeat 1 461 0 1 803 1401 36 0 10 chrUextra 28681906 28682299 -322357 + (GAGAA)n Simple_repeat Simple_repeat 1 388 0 1 803 2366 74 39 10 chrUextra 28682399 28682782 -321874 + DMSAT6 Satellite Satellite 49 442 -28 1 803 3123 41 0 2 chrUextra 28682895 28683290 -321366 - IDEFIX_I LTR Gypsy -1285 4343 3950 1 803 3121 39 8 10 chrUextra 28683390 28683783 -320873 + DM297_LTR LTR Gypsy 23 414 0 1 803 609 85 55 21 chrUextra 28683915 28683935 -320721 + polypurine Low_complexity Low_complexity 5 22 0 1 803 1013 96 17 11 chrUextra 28683935 28684114 -320542 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 609 85 55 21 chrUextra 28684114 28684238 -320418 + GA-rich Low_complexity Low_complexity 23 153 0 1 803 371 0 0 0 chrUextra 28685369 28685409 -319247 - NTS_DM Other Other -200 40 1 1 803 1986 0 17 13 chrUextra 28685409 28685648 -319008 - NTS_DM Other Other 0 240 1 1 803 772 18 35 26 chrUextra 28685648 28685763 -318893 - NTS_DM Other Other 0 240 125 1 803 2190 93 28 20 chrUextra 28685863 28686257 -318399 - DMSAT6 Satellite Satellite -28 442 46 1 803 1620 10 0 3 chrUextra 28686357 28686751 -317905 + (GAGAA)n Simple_repeat Simple_repeat 1 392 0 1 803 1041 96 0 0 chrUextra 28686866 28687044 -317612 + (CTTAT)n Simple_repeat Simple_repeat 1 178 0 1 803 1027 84 0 11 chrUextra 28687065 28687245 -317411 + (TCTTG)n Simple_repeat Simple_repeat 3 180 0 1 803 1206 67 0 0 chrUextra 28687839 28688017 -316639 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 803 1449 30 0 0 chrUextra 28688033 28688233 -316423 + (GAGAA)n Simple_repeat Simple_repeat 1 200 0 1 803 1620 0 0 0 chrUextra 28688364 28688724 -315932 + (TAGA)n Simple_repeat Simple_repeat 1 360 0 1 803 1224 62 0 0 chrUextra 28688844 28689055 -315601 + (TTCTC)n Simple_repeat Simple_repeat 1 211 0 1 803 871 100 0 13 chrUextra 28689067 28689219 -315437 + (GAGAA)n Simple_repeat Simple_repeat 1 150 0 1 803 1587 32 0 26 chrUextra 28689319 28689619 -315037 + (G)n Simple_repeat Simple_repeat 1 292 0 1 803 261 0 0 0 chrUextra 28689641 28689670 -314986 + (G)n Simple_repeat Simple_repeat 1 29 0 1 803 1143 72 0 0 chrUextra 28690305 28690472 -314184 + (TAGA)n Simple_repeat Simple_repeat 4 170 0 1 803 228 130 0 0 chrUextra 28690473 28690519 -314137 + (CTAG)n Simple_repeat Simple_repeat 1 46 0 1 803 1296 51 0 0 chrUextra 28690520 28690697 -313959 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 1 803 319 331 36 14 chrUextra 28690797 28690935 -313721 + CT-rich Low_complexity Low_complexity 3 143 0 1 803 398 6 0 160 chrUextra 28690948 28691160 -313496 + CT-rich Low_complexity Low_complexity 1 178 0 1 803 273 29 0 0 chrUextra 28691289 28691323 -313333 + (TTCTC)n Simple_repeat Simple_repeat 5 38 0 1 803 578 157 51 9 chrUextra 28691339 28691679 -312977 + GA-rich Low_complexity Low_complexity 1 354 0 1 803 3624 3 0 0 chrUextra 28692273 28692665 -311991 + R1_DM LINE R1 1360 1751 -3605 1 803 2342 88 25 15 chrUextra 28692765 28693157 -311499 - DMSAT6 Satellite Satellite -43 427 32 1 803 1620 52 0 0 chrUextra 28693257 28693649 -311007 + (TAGA)n Simple_repeat Simple_repeat 1 392 0 1 803 702 152 0 0 chrUextra 28693749 28693926 -310730 + (TCTCTG)n Simple_repeat Simple_repeat 4 180 0 1 803 3450 13 8 0 chrUextra 28694241 28694632 -310024 - DOC2_DM LINE Jockey -2700 2093 1700 1 803 522 43 0 0 chrUextra 28695054 28695123 -309533 + (GAGAA)n Simple_repeat Simple_repeat 2 70 0 1 803 1092 89 0 0 chrUextra 28695224 28695404 -309252 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 1578 6 0 0 chrUextra 28695434 28695613 -309043 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 803 1620 0 0 0 chrUextra 28695730 28695910 -308746 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 803 582 180 0 0 chrUextra 28695925 28696103 -308553 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 1 803 1446 33 0 0 chrUextra 28696215 28696395 -308261 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 1 803 474 231 7 13 chrUextra 28696434 28696583 -308073 + DOC LINE Jockey 10 157 -4568 1 803 1620 94 0 3 chrUextra 28696693 28697045 -307611 + (TAGA)n Simple_repeat Simple_repeat 1 351 0 1 803 1569 18 0 0 chrUextra 28697183 28697573 -307083 + (TAGA)n Simple_repeat Simple_repeat 1 390 0 1 803 3466 10 0 5 chrUextra 28697673 28698063 -306593 + SSU-rRNA_Dme rRNA rRNA 1269 1656 -339 1 803 581 11 0 136 chrUextra 28698165 28698371 -306285 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 1 803 401 51 0 138 chrUextra 28698372 28698553 -306103 + A-rich Low_complexity Low_complexity 6 161 0 1 803 1481 32 0 11 chrUextra 28698662 28699042 -305614 + (GAGAA)n Simple_repeat Simple_repeat 1 375 0 1 803 1382 41 0 12 chrUextra 28699631 28699954 -304702 + (TTCTC)n Simple_repeat Simple_repeat 1 318 0 1 803 348 43 0 0 chrUextra 28699974 28700020 -304636 + (GAGAA)n Simple_repeat Simple_repeat 1 46 0 1 803 243 33 98 0 chrUextra 28700445 28700506 -304150 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 803 1580 21 0 5 chrUextra 28700609 28700994 -303662 + (CGAGA)n Simple_repeat Simple_repeat 1 382 0 1 803 2184 77 13 28 chrUextra 28701097 28701485 -303171 - DMSAT6 Satellite Satellite -44 426 45 1 803 1527 29 0 3 chrUextra 28701587 28701973 -302683 + (GAGAA)n Simple_repeat Simple_repeat 1 384 0 1 803 1263 57 0 0 chrUextra 28702082 28702259 -302397 + (TTCTC)n Simple_repeat Simple_repeat 4 180 0 1 803 924 82 0 5 chrUextra 28702259 28702460 -302196 + (CTTAT)n Simple_repeat Simple_repeat 1 199 0 1 803 3347 0 0 5 chrUextra 28702560 28702947 -301709 - LSU-rRNA_Dme rRNA rRNA -3037 863 479 1 803 1449 22 115 6 chrUextra 28703047 28703229 -301427 + DMRT1B LINE R1 4982 5183 0 1 803 1620 0 0 0 chrUextra 28703229 28703431 -301225 + (CACAA)n Simple_repeat Simple_repeat 1 202 0 1 803 1371 6 0 0 chrUextra 28703533 28703689 -300967 + (CAAGA)n Simple_repeat Simple_repeat 1 156 0 1 803 1529 185 3 32 chrUextra 28704022 28704401 -300255 + SAR_DM Satellite Satellite 524 891 -581 1 803 1191 69 0 0 chrUextra 28704505 28704680 -299976 + (AATAG)n Simple_repeat Simple_repeat 5 179 0 1 100 1554 11 0 0 chrUextra 28704694 28704874 -299782 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 1 804 1620 25 0 0 chrUextra 28705496 28705856 -298800 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 804 962 9 0 9 chrUextra 28705963 28706079 -298577 + (CTTAG)n Simple_repeat Simple_repeat 1 115 0 1 804 600 53 0 0 chrUextra 28706079 28706154 -298502 + (TCTTG)n Simple_repeat Simple_repeat 1 76 0 1 804 1092 89 0 0 chrUextra 28706154 28706334 -298322 + (ATCTG)n Simple_repeat Simple_repeat 1 180 0 1 804 480 18 0 0 chrUextra 28706448 28706505 -298151 + (TTCTC)n Simple_repeat Simple_repeat 5 61 0 1 804 468 0 0 0 chrUextra 28707683 28707735 -296921 + (T)n Simple_repeat Simple_repeat 1 52 0 1 804 595 0 0 0 chrUextra 28707903 28707966 -296690 - NTS_DM Other Other -177 63 1 1 804 1926 0 17 21 chrUextra 28707966 28708207 -296449 - NTS_DM Other Other 0 240 1 1 804 570 0 49 37 chrUextra 28708207 28708288 -296368 - NTS_DM Other Other 0 240 159 1 804 1599 5 0 3 chrUextra 28708388 28708773 -295883 + (GAGAA)n Simple_repeat Simple_repeat 1 383 0 1 804 1138 12 0 58 chrUextra 28708873 28709237 -295419 + (GAGAA)n Simple_repeat Simple_repeat 1 342 0 1 804 204 217 0 21 chrUextra 28709371 28709418 -295238 + (CGAG)n Simple_repeat Simple_repeat 1 46 0 1 804 279 125 236 0 chrUextra 28709566 28709742 -294914 + (TTTAG)n Simple_repeat Simple_repeat 1 217 0 1 804 1494 17 0 0 chrUextra 28709863 28710040 -294616 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 804 1206 67 0 0 chrUextra 28710041 28710219 -294437 + (TCTCG)n Simple_repeat Simple_repeat 3 180 0 1 804 1547 50 0 3 chrUextra 28710330 28710701 -293955 + (ATAAG)n Simple_repeat Simple_repeat 1 369 0 1 804 21 36 0 0 chrUextra 28711152 28711180 -293476 + AT_rich Low_complexity Low_complexity 1 28 0 1 804 1812 157 18 21 chrUextra 28711294 28711678 -292978 - SAR_DM Satellite Satellite -625 847 465 1 804 267 20 17 145 chrUextra 28711798 28712157 -292499 + (CACAA)n Simple_repeat Simple_repeat 1 312 0 1 804 202 265 0 0 chrUextra 28712268 28712317 -292339 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 1272 7 0 0 chrUextra 28712747 28712892 -291764 + (CTTAT)n Simple_repeat Simple_repeat 5 149 0 1 804 1058 85 0 6 chrUextra 28712903 28713081 -291575 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 804 333 0 0 0 chrUextra 28713081 28713117 -291539 + (CTACT)n Simple_repeat Simple_repeat 1 37 0 1 804 1467 42 0 0 chrUextra 28713248 28713608 -291048 + (AATAG)n Simple_repeat Simple_repeat 1 360 0 1 804 1599 22 0 0 chrUextra 28714207 28714567 -290089 + (ATAAG)n Simple_repeat Simple_repeat 1 360 0 1 804 905 138 38 6 chrUextra 28714689 28715036 -289620 + CT-rich Low_complexity Low_complexity 1 358 0 1 804 2666 8 3 6 chrUextra 28715166 28715519 -289137 + TABOR_I LTR Gypsy 5815 6166 -170 1 804 1521 62 0 0 chrUextra 28715653 28716010 -288646 + (TAGA)n Simple_repeat Simple_repeat 1 357 0 1 804 198 0 0 0 chrUextra 28716010 28716032 -288624 + (CGAT)n Simple_repeat Simple_repeat 1 22 0 1 804 2319 78 60 0 chrUextra 28716132 28716515 -288141 + STALKER4_I LTR Gypsy 5925 6330 -200 1 804 23 0 0 0 chrUextra 28717659 28717682 -286974 + AT_rich Low_complexity Low_complexity 1 23 0 1 804 282 56 0 0 chrUextra 28717925 28717961 -286695 + (TTCTC)n Simple_repeat Simple_repeat 5 40 0 1 804 189 13 0 133 chrUextra 28718136 28718226 -286430 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 804 373 31 108 30 chrUextra 28718227 28718394 -286262 + CT-rich Low_complexity Low_complexity 1 180 0 1 804 203 108 54 0 chrUextra 28718404 28718441 -286215 + GA-rich Low_complexity Low_complexity 1 39 0 1 804 1356 39 0 24 chrUextra 28718542 28718917 -285739 + (GGAGAA)n Simple_repeat Simple_repeat 1 365 0 1 804 1620 0 0 0 chrUextra 28719502 28719717 -284939 + (TAGA)n Simple_repeat Simple_repeat 1 215 0 1 804 191 139 23 0 chrUextra 28719717 28719743 -284913 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 1 804 537 100 0 0 chrUextra 28719743 28719833 -284823 + (ATCG)n Simple_repeat Simple_repeat 4 93 0 1 804 191 139 23 0 chrUextra 28719833 28719849 -284807 + (CAGA)n Simple_repeat Simple_repeat 3 18 0 1 804 248 0 0 30 chrUextra 28719849 28719882 -284774 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 1 804 1599 4 0 0 chrUextra 28720086 28720360 -284296 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 804 1620 8 0 0 chrUextra 28720481 28720841 -283815 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 804 1479 22 0 0 chrUextra 28720942 28721121 -283535 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 804 1290 56 0 0 chrUextra 28721136 28721316 -283340 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 804 1831 176 11 5 chrUextra 28721422 28721798 -282858 - SAR_DM Satellite Satellite -599 873 496 1 804 1580 0 0 6 chrUextra 28721902 28722083 -282573 + (TTGTG)n Simple_repeat Simple_repeat 1 180 0 1 804 266 121 61 0 chrUextra 28722381 28722447 -282209 + CT-rich Low_complexity Low_complexity 5 74 0 1 804 730 141 35 15 chrUextra 28722499 28722756 -281900 + GA-rich Low_complexity Low_complexity 1 261 0 1 804 1620 3 0 0 chrUextra 28722860 28723234 -281422 + (TAGA)n Simple_repeat Simple_repeat 1 374 0 1 804 396 231 8 0 chrUextra 28723340 28723474 -281182 + (CAAA)n Simple_repeat Simple_repeat 4 138 0 1 804 212 6 10 149 chrUextra 28723484 28723678 -280978 + (CACAA)n Simple_repeat Simple_repeat 4 170 0 1 804 1620 56 0 0 chrUextra 28724297 28724676 -279980 + (TAGA)n Simple_repeat Simple_repeat 1 379 0 1 804 233 0 0 161 chrUextra 28724779 28724990 -279666 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 804 654 160 0 0 chrUextra 28725003 28725134 -279522 + (CA)n Simple_repeat Simple_repeat 1 131 0 1 804 1611 0 0 0 chrUextra 28725258 28725518 -279138 + (CAATA)n Simple_repeat Simple_repeat 1 260 0 1 804 873 0 0 0 chrUextra 28725527 28725624 -279032 + (TATAA)n Simple_repeat Simple_repeat 2 98 0 1 804 448 155 49 7 chrUextra 28725766 28725909 -278747 + GA-rich Low_complexity Low_complexity 5 153 0 1 804 340 148 66 0 chrUextra 28725949 28726071 -278585 + GA-rich Low_complexity Low_complexity 5 134 0 1 804 293 0 130 0 chrUextra 28726689 28726766 -277890 + (GA)n Simple_repeat Simple_repeat 2 88 0 1 804 206 0 0 129 chrUextra 28726767 28726829 -277827 + (CAGAGA)n Simple_repeat Simple_repeat 1 54 0 1 804 460 0 0 139 chrUextra 28726854 28727063 -277593 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 1 804 1620 13 0 0 chrUextra 28727165 28727542 -277114 + (GAGAA)n Simple_repeat Simple_repeat 1 377 0 1 804 1326 75 0 3 chrUextra 28728128 28728495 -276161 + (GAGAA)n Simple_repeat Simple_repeat 1 365 0 1 804 524 28 0 137 chrUextra 28729075 28729280 -275376 + A-rich Low_complexity Low_complexity 2 178 0 1 804 357 45 0 137 chrUextra 28729296 28729449 -275207 + A-rich Low_complexity Low_complexity 5 136 0 1 804 1026 0 0 0 chrUextra 28729812 28729926 -274730 + (TTCTC)n Simple_repeat Simple_repeat 4 117 0 1 804 516 32 0 0 chrUextra 28730026 28730088 -274568 + (TTTTG)n Simple_repeat Simple_repeat 4 65 0 1 804 1620 10 0 0 chrUextra 28730088 28730387 -274269 + (CAAAA)n Simple_repeat Simple_repeat 1 299 0 1 804 1838 90 43 21 chrUextra 28730502 28730876 -273780 - DMSAT6 Satellite Satellite -5 465 84 1 804 1620 11 0 0 chrUextra 28730978 28731328 -273328 + (GAGAA)n Simple_repeat Simple_repeat 1 350 0 1 804 1566 50 0 3 chrUextra 28731454 28731820 -272836 + (CTTAT)n Simple_repeat Simple_repeat 1 364 0 1 804 558 100 67 0 chrUextra 28731997 28732117 -272539 + CT-rich Low_complexity Low_complexity 2 129 0 1 804 1151 72 0 6 chrUextra 28732117 28732298 -272358 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 804 540 42 0 0 chrUextra 28732398 28732469 -272187 + (TCTCG)n Simple_repeat Simple_repeat 1 71 0 1 804 1281 56 0 0 chrUextra 28732469 28732648 -272008 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 804 735 90 0 0 chrUextra 28732649 28732771 -271885 + (CTTAT)n Simple_repeat Simple_repeat 3 124 0 1 804 774 0 0 0 chrUextra 28732871 28732959 -271697 + LSU-rRNA_Dme rRNA rRNA 2567 2654 -1246 1 804 2427 10 0 3 chrUextra 28732955 28733244 -271412 + R1_DM LINE R1 4831 5118 -238 1 804 1137 125 0 25 chrUextra 28733347 28733702 -270954 + (TA)n Simple_repeat Simple_repeat 1 345 0 1 804 252 0 0 0 chrUextra 28734290 28734318 -270338 + (TTCTC)n Simple_repeat Simple_repeat 5 32 0 1 804 842 28 0 9 chrUextra 28734762 28734872 -269784 + (TTCTC)n Simple_repeat Simple_repeat 1 109 0 1 804 1158 82 0 0 chrUextra 28734887 28735134 -269522 + (GAGAA)n Simple_repeat Simple_repeat 1 247 0 1 804 219 158 52 17 chrUextra 28735328 28735386 -269270 + (CATA)n Simple_repeat Simple_repeat 1 60 0 1 804 318 26 0 0 chrUextra 28735464 28735503 -269153 + (A)n Simple_repeat Simple_repeat 1 39 0 1 804 1359 45 0 0 chrUextra 28735706 28735885 -268771 + (TTGTG)n Simple_repeat Simple_repeat 1 179 0 1 804 216 158 0 0 chrUextra 28735885 28735942 -268714 + (GTGTG)n Simple_repeat Simple_repeat 4 60 0 1 804 570 51 0 0 chrUextra 28735955 28736033 -268623 + (TTGTG)n Simple_repeat Simple_repeat 4 81 0 1 804 375 23 0 0 chrUextra 28736033 28736077 -268579 + (CAACT)n Simple_repeat Simple_repeat 2 45 0 1 804 1620 10 0 0 chrUextra 28736177 28736476 -268180 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 804 1488 55 0 3 chrUextra 28736648 28737019 -267637 + (GAAAA)n Simple_repeat Simple_repeat 1 369 0 1 804 1437 16 0 12 chrUextra 28737160 28737409 -267247 + (TTCTC)n Simple_repeat Simple_repeat 1 245 0 1 804 210 37 0 0 chrUextra 28737409 28737435 -267221 + (CATCT)n Simple_repeat Simple_repeat 1 27 0 1 804 324 0 0 0 chrUextra 28737454 28737490 -267166 + (GAGAA)n Simple_repeat Simple_repeat 4 39 0 1 804 1092 158 0 3 chrUextra 28737590 28737953 -266703 + (TA)n Simple_repeat Simple_repeat 1 361 0 1 804 1533 22 0 8 chrUextra 28738061 28738426 -266230 + (TCTA)n Simple_repeat Simple_repeat 1 361 0 1 804 485 237 12 0 chrUextra 28738533 28738702 -265954 + (CAAA)n Simple_repeat Simple_repeat 4 174 0 1 804 452 23 10 121 chrUextra 28738704 28738903 -265753 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 804 690 119 0 0 chrUextra 28739003 28739137 -265519 + (CAAGA)n Simple_repeat Simple_repeat 1 134 0 1 804 1356 52 0 0 chrUextra 28739137 28739370 -265286 + (ACATG)n Simple_repeat Simple_repeat 1 233 0 1 804 1044 0 0 0 chrUextra 28739473 28739589 -265067 + (TTCTC)n Simple_repeat Simple_repeat 1 116 0 1 804 1364 36 0 4 chrUextra 28739589 28739843 -264813 + (CTTAT)n Simple_repeat Simple_repeat 1 252 0 1 804 1487 17 0 6 chrUextra 28739943 28740122 -264534 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 804 291 85 0 0 chrUextra 28740122 28740168 -264488 + (CATCT)n Simple_repeat Simple_repeat 1 47 0 1 804 795 96 0 0 chrUextra 28740177 28740313 -264343 + (GAGAA)n Simple_repeat Simple_repeat 5 140 0 1 804 1406 75 0 8 chrUextra 28740414 28740775 -263881 + (GAGAA)n Simple_repeat Simple_repeat 1 358 0 1 804 1620 0 0 0 chrUextra 28740883 28741219 -263437 + (GAGAA)n Simple_repeat Simple_repeat 1 336 0 1 804 194 0 13 120 chrUextra 28741826 28741901 -262755 + (CAGAGA)n Simple_repeat Simple_repeat 6 72 0 1 804 546 12 117 12 chrUextra 28741896 28742058 -262598 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 804 279 35 83 58 chrUextra 28742058 28742178 -262478 + GA-rich Low_complexity Low_complexity 2 124 0 1 804 343 0 0 41 chrUextra 28743251 28743300 -261356 + (TTGTG)n Simple_repeat Simple_repeat 4 50 0 1 804 245 241 0 0 chrUextra 28743308 28743387 -261269 + (TTTG)n Simple_repeat Simple_repeat 4 82 0 1 804 219 0 0 162 chrUextra 28743395 28743599 -261057 + (TTGTG)n Simple_repeat Simple_repeat 5 175 0 1 804 1041 95 0 0 chrUextra 28743717 28744065 -260591 + (ACATG)n Simple_repeat Simple_repeat 1 348 0 1 804 1470 44 0 0 chrUextra 28744170 28744537 -260119 + (ATAAG)n Simple_repeat Simple_repeat 1 367 0 1 804 498 17 0 0 chrUextra 28744637 28744696 -259960 + (TTCTC)n Simple_repeat Simple_repeat 3 61 0 1 804 1479 54 0 0 chrUextra 28744721 28745001 -259655 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 804 1435 32 0 0 chrUextra 28745106 28745292 -259364 - NTS_DM Other Other -54 186 1 1 804 1250 11 22 22 chrUextra 28745292 28745475 -259181 - NTS_DM Other Other 0 240 58 1 804 1080 42 0 0 chrUextra 28745575 28745717 -258939 + (ATAAG)n Simple_repeat Simple_repeat 4 145 0 1 804 1401 43 0 0 chrUextra 28745731 28745942 -258714 + (ATAAG)n Simple_repeat Simple_repeat 1 211 0 1 804 1557 39 0 8 chrUextra 28746044 28746405 -258251 + (GAGAA)n Simple_repeat Simple_repeat 1 358 0 1 804 858 8 71 19 chrUextra 28746513 28746781 -257875 + (TAG)n Simple_repeat Simple_repeat 1 282 0 1 804 182 28 108 27 chrUextra 28746802 28746876 -257780 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 804 1579 165 15 6 chrUextra 28747008 28747349 -257307 - SAR_DM Satellite Satellite -749 723 380 1 804 2717 47 0 11 chrUextra 28747449 28747817 -256839 - HETA LINE telomeric -120 5961 5598 1 804 1620 6 0 3 chrUextra 28747918 28748279 -256377 + (TTCTCC)n Simple_repeat Simple_repeat 1 359 0 1 804 1399 22 0 11 chrUextra 28748393 28748574 -256082 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 1062 87 0 0 chrUextra 28748574 28748747 -255909 + (CGAGA)n Simple_repeat Simple_repeat 1 173 0 1 804 1620 0 0 0 chrUextra 28748851 28749071 -255585 + (TAGA)n Simple_repeat Simple_repeat 1 220 0 1 804 564 176 0 0 chrUextra 28749087 28749218 -255438 + (TAGA)n Simple_repeat Simple_repeat 1 131 0 1 804 1587 14 0 3 chrUextra 28749318 28749683 -254973 + (GAGAA)n Simple_repeat Simple_repeat 1 363 0 1 804 1191 69 0 11 chrUextra 28749785 28750152 -254504 + (CTTAT)n Simple_repeat Simple_repeat 1 362 0 1 804 1234 33 12 16 chrUextra 28750361 28750608 -254048 + (TCTTG)n Simple_repeat Simple_repeat 1 246 0 1 804 1389 39 0 0 chrUextra 28750719 28750899 -253757 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 804 888 106 0 0 chrUextra 28750899 28751060 -253596 + (ACATG)n Simple_repeat Simple_repeat 5 165 0 1 804 606 49 0 0 chrUextra 28751185 28751267 -253389 + (CGAGA)n Simple_repeat Simple_repeat 3 84 0 1 804 1620 7 0 0 chrUextra 28751267 28751551 -253105 + (CCGAG)n Simple_repeat Simple_repeat 1 284 0 1 804 1455 36 0 0 chrUextra 28751651 28751985 -252671 + (CTTAT)n Simple_repeat Simple_repeat 1 334 0 1 804 1620 17 0 0 chrUextra 28752117 28752475 -252181 + (GAGAA)n Simple_repeat Simple_repeat 1 358 0 1 804 1500 23 0 0 chrUextra 28752583 28752759 -251897 + (TTCTC)n Simple_repeat Simple_repeat 2 177 0 1 804 1479 22 0 0 chrUextra 28752770 28752949 -251707 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 804 1599 3 0 3 chrUextra 28753049 28753415 -251241 + (GAGAA)n Simple_repeat Simple_repeat 1 364 0 1 804 216 0 0 0 chrUextra 28753515 28753539 -251117 + (TTCTC)n Simple_repeat Simple_repeat 4 27 0 1 804 1620 12 0 0 chrUextra 28753543 28753873 -250783 + (GAGAA)n Simple_repeat Simple_repeat 1 330 0 1 804 1620 6 0 0 chrUextra 28753991 28754345 -250311 + (TTCTC)n Simple_repeat Simple_repeat 1 354 0 1 804 934 0 29 22 chrUextra 28754445 28754582 -250074 + NTS_DM Other Other 103 240 0 1 804 1716 27 0 4 chrUextra 28754582 28754807 -249849 + NTS_DM Other Other 1 224 -16 1 804 1620 0 0 0 chrUextra 28754910 28755119 -249537 + (GAGAA)n Simple_repeat Simple_repeat 1 209 0 1 804 1620 0 0 0 chrUextra 28755375 28755706 -248950 + (GAGAA)n Simple_repeat Simple_repeat 1 331 0 1 804 507 56 0 0 chrUextra 28756305 28756376 -248280 + (TTCTC)n Simple_repeat Simple_repeat 5 75 0 1 804 1269 65 0 11 chrUextra 28756385 28756662 -247994 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 804 1620 36 0 0 chrUextra 28756775 28757133 -247523 + (TTCTC)n Simple_repeat Simple_repeat 1 358 0 1 804 1408 34 0 8 chrUextra 28757233 28757597 -247059 + (CTTAT)n Simple_repeat Simple_repeat 1 360 0 1 804 357 86 0 0 chrUextra 28757698 28757756 -246900 + (TATTG)n Simple_repeat Simple_repeat 1 58 0 1 804 1620 4 0 0 chrUextra 28757756 28758030 -246626 + (TCTTG)n Simple_repeat Simple_repeat 1 274 0 1 804 392 161 81 39 chrUextra 28758161 28758467 -246189 + (CATATA)n Simple_repeat Simple_repeat 1 318 0 1 804 1580 29 0 3 chrUextra 28758644 28758986 -245670 + (ATAAG)n Simple_repeat Simple_repeat 1 341 0 1 804 1620 0 0 0 chrUextra 28759550 28759864 -244792 + (GAGAA)n Simple_repeat Simple_repeat 1 314 0 1 804 1446 181 11 22 chrUextra 28760013 28760375 -244281 + SAR_DM Satellite Satellite 415 772 -700 1 804 1620 6 0 0 chrUextra 28760939 28761285 -243371 + (CAAGA)n Simple_repeat Simple_repeat 1 346 0 1 804 336 24 0 0 chrUextra 28761402 28761443 -243213 + (TTCTC)n Simple_repeat Simple_repeat 2 42 0 1 804 1587 47 0 0 chrUextra 28761457 28761737 -242919 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 804 372 129 59 17 chrUextra 28761864 28761982 -242674 + CT-rich Low_complexity Low_complexity 2 124 0 1 804 821 107 17 34 chrUextra 28762012 28762187 -242469 + GA-rich Low_complexity Low_complexity 5 176 0 1 804 206 62 31 0 chrUextra 28762194 28762226 -242430 + (GAGAA)n Simple_repeat Simple_repeat 5 37 0 1 804 911 142 0 5 chrUextra 28762790 28763014 -241642 + (CATCT)n Simple_repeat Simple_repeat 1 222 0 1 804 687 178 0 0 chrUextra 28762976 28763150 -241506 + CT-rich Low_complexity Low_complexity 1 174 0 1 804 738 0 0 0 chrUextra 28763712 28763794 -240862 + (CAAGA)n Simple_repeat Simple_repeat 5 86 0 1 804 1620 0 0 3 chrUextra 28764174 28764535 -240121 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 1 804 1479 167 31 20 chrUextra 28764642 28764996 -239660 + SAR_DM Satellite Satellite 680 1037 -435 1 804 1439 6 0 22 chrUextra 28765112 28765296 -239360 + (CATGT)n Simple_repeat Simple_repeat 1 180 0 1 804 1014 85 0 0 chrUextra 28765296 28765460 -239196 + (CATCT)n Simple_repeat Simple_repeat 1 164 0 1 804 1488 44 0 0 chrUextra 28765560 28765921 -238735 + (TAGA)n Simple_repeat Simple_repeat 1 361 0 1 804 1488 22 0 0 chrUextra 28766021 28766382 -238274 + (ATAAG)n Simple_repeat Simple_repeat 1 361 0 1 804 1620 37 12 0 chrUextra 28766945 28767272 -237384 + (GAGAA)n Simple_repeat Simple_repeat 1 330 0 1 804 2805 39 0 3 chrUextra 28767404 28767765 -236891 - ROO_I LTR Pao -2507 5749 5390 1 804 1413 44 0 0 chrUextra 28768326 28768577 -236079 + (CACAA)n Simple_repeat Simple_repeat 1 251 0 1 804 861 10 0 0 chrUextra 28768588 28768686 -235970 + (CACAA)n Simple_repeat Simple_repeat 1 98 0 1 804 543 16 0 0 chrUextra 28768786 28768850 -235806 + (TTCTC)n Simple_repeat Simple_repeat 5 68 0 1 804 1620 0 0 0 chrUextra 28768863 28769143 -235513 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 804 1226 203 19 28 chrUextra 28769246 28769606 -235050 + SAR_DM Satellite Satellite 443 799 -673 1 804 1620 3 0 0 chrUextra 28769706 28770050 -234606 + (GAGAA)n Simple_repeat Simple_repeat 1 344 0 1 804 459 0 0 0 chrUextra 28770166 28770217 -234439 + (TTCTC)n Simple_repeat Simple_repeat 1 51 0 1 804 1620 7 0 0 chrUextra 28770230 28770525 -234131 + (GAGAA)n Simple_repeat Simple_repeat 1 295 0 1 804 1620 18 0 0 chrUextra 28770627 28770856 -233800 + (TTCTC)n Simple_repeat Simple_repeat 1 229 0 1 804 420 77 0 0 chrUextra 28770857 28770922 -233734 + (TCTCG)n Simple_repeat Simple_repeat 1 65 0 1 804 549 0 0 0 chrUextra 28770925 28770986 -233670 + (GAGAA)n Simple_repeat Simple_repeat 5 65 0 1 804 1464 22 0 3 chrUextra 28771087 28771445 -233211 + (GAGAA)n Simple_repeat Simple_repeat 1 356 0 1 804 927 0 0 0 chrUextra 28772463 28772566 -232090 + (GAGAA)n Simple_repeat Simple_repeat 4 106 0 1 804 1599 59 0 0 chrUextra 28772922 28773281 -231375 + (TAGA)n Simple_repeat Simple_repeat 1 359 0 1 804 594 170 0 0 chrUextra 28773840 28773987 -230669 + (ATCG)n Simple_repeat Simple_repeat 4 150 0 1 804 1488 19 0 0 chrUextra 28773987 28774199 -230457 + (TCTA)n Simple_repeat Simple_repeat 1 212 0 1 804 579 20 49 20 chrUextra 28774300 28774402 -230254 + (TAA)n Simple_repeat Simple_repeat 3 107 0 1 804 1637 34 0 0 chrUextra 28774420 28774657 -229999 - HMSBEAGLE_I LTR Gypsy -5742 787 551 1 804 1307 23 0 32 chrUextra 28774760 28775115 -229541 + (CATCT)n Simple_repeat Simple_repeat 1 343 0 1 804 1921 74 45 17 chrUextra 28775216 28775573 -229083 + DMSAT6 Satellite Satellite 61 427 -43 1 804 390 21 0 0 chrUextra 28775673 28775720 -228936 + (TTCTC)n Simple_repeat Simple_repeat 2 48 0 1 804 1620 23 3 0 chrUextra 28775727 28776028 -228628 + (GAGAA)n Simple_repeat Simple_repeat 1 301 0 1 804 1308 81 0 0 chrUextra 28776135 28776345 -228311 + (TTCTC)n Simple_repeat Simple_repeat 1 210 0 1 804 831 93 0 0 chrUextra 28776348 28776488 -228168 + (CTTAT)n Simple_repeat Simple_repeat 1 140 0 1 804 489 119 207 18 chrUextra 28776590 28776621 -228035 + DNAREP1_DM LINE Penelope 450 480 -114 1 804 189 0 0 0 chrUextra 28776621 28776642 -228014 + (TATATG)n Simple_repeat Simple_repeat 2 22 0 1 804 489 119 207 18 chrUextra 28776642 28776721 -227935 + DNAREP1_DM LINE Penelope 481 579 -15 1 804 398 227 0 0 chrUextra 28776718 28776806 -227850 - MAX_I LTR Pao -5078 2836 2749 1 804 312 204 301 0 chrUextra 28776833 28776936 -227720 - MAX_I LTR Pao -5255 2659 2526 1 804 2737 31 3 8 chrUextra 28777045 28777402 -227254 - LSU-rRNA_Dme rRNA rRNA -2309 1591 1237 1 804 2794 39 0 0 chrUextra 28777502 28777859 -226797 + PROTOP_A DNA P 493 849 -256 1 804 1433 96 0 3 chrUextra 28777959 28778313 -226343 + (TCTTG)n Simple_repeat Simple_repeat 1 353 0 1 804 1142 73 0 6 chrUextra 28778418 28778598 -226058 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 984 95 0 0 chrUextra 28778600 28778768 -225888 + (AGATG)n Simple_repeat Simple_repeat 3 170 0 1 804 1587 5 0 0 chrUextra 28779328 28779548 -225108 + (CATCT)n Simple_repeat Simple_repeat 1 220 0 1 804 1092 8 0 0 chrUextra 28779559 28779684 -224972 + (CATCT)n Simple_repeat Simple_repeat 1 125 0 1 804 714 12 0 0 chrUextra 28779784 28779867 -224789 + (TTCTC)n Simple_repeat Simple_repeat 3 85 0 1 804 1479 23 0 11 chrUextra 28779877 28780140 -224516 + (GAGAA)n Simple_repeat Simple_repeat 1 259 0 1 804 1429 0 0 0 chrUextra 28780240 28780392 -224264 - LSU-rRNA_Dme rRNA rRNA -1962 1938 1787 1 804 1351 12 12 6 chrUextra 28780432 28780595 -224061 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1628 1 804 1477 18 0 11 chrUextra 28780696 28780976 -223680 + (TTCTC)n Simple_repeat Simple_repeat 1 277 0 1 804 183 114 0 0 chrUextra 28780979 28781014 -223642 + (TATCG)n Simple_repeat Simple_repeat 4 38 0 1 804 333 0 0 0 chrUextra 28781014 28781050 -223606 + (GAGAA)n Simple_repeat Simple_repeat 5 41 0 1 804 1620 3 0 0 chrUextra 28781152 28781505 -223151 + (GAGAA)n Simple_repeat Simple_repeat 1 353 0 1 804 383 23 0 0 chrUextra 28781605 28781648 -223008 - NTS_DM Other Other -197 43 1 1 804 1714 17 20 45 chrUextra 28781648 28781894 -222762 - NTS_DM Other Other 0 240 1 1 804 451 0 62 46 chrUextra 28781894 28781959 -222697 - NTS_DM Other Other 0 240 175 1 804 3306 3 0 0 chrUextra 28782059 28782413 -222243 + LSU-rRNA_Dme rRNA rRNA 3066 3419 -481 1 804 948 103 0 0 chrUextra 28782526 28782682 -221974 + (CTTAT)n Simple_repeat Simple_repeat 5 160 0 1 804 1161 73 11 11 chrUextra 28782685 28782864 -221792 + (CATCT)n Simple_repeat Simple_repeat 2 180 0 1 804 1578 46 0 8 chrUextra 28782967 28783321 -221335 + (GAGAA)n Simple_repeat Simple_repeat 1 351 0 1 804 1422 33 0 0 chrUextra 28783889 28784069 -220587 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 804 806 87 0 7 chrUextra 28784090 28784229 -220427 + (GAGAA)n Simple_repeat Simple_repeat 1 138 0 1 804 3128 8 0 3 chrUextra 28785236 28785589 -219067 + R1_DM LINE R1 4651 5002 -354 1 804 3244 3 3 0 chrUextra 28786142 28786495 -218161 + LSU-rRNA_Dme rRNA rRNA 2016 2369 -1531 1 804 1552 194 34 6 chrUextra 28786595 28786948 -217708 - SAR_DM Satellite Satellite -525 947 585 1 804 1620 4 0 0 chrUextra 28787048 28787319 -217337 + (CAAGA)n Simple_repeat Simple_repeat 1 271 0 1 804 2222 8 0 0 chrUextra 28787611 28787852 -216804 + SSU-rRNA_Dme rRNA rRNA 1 241 -1754 1 804 1310 54 27 9 chrUextra 28787952 28788289 -216367 + (GAGAA)n Simple_repeat Simple_repeat 1 343 0 1 804 489 17 0 0 chrUextra 28788404 28788462 -216194 + (TTCTC)n Simple_repeat Simple_repeat 5 62 0 1 804 532 30 88 29 chrUextra 28788502 28788672 -215984 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 804 191 51 85 37 chrUextra 28788674 28788756 -215900 + GA-rich Low_complexity Low_complexity 2 87 0 1 804 505 0 130 7 chrUextra 28788866 28789012 -215644 + (TC)n Simple_repeat Simple_repeat 1 164 0 1 804 546 12 124 6 chrUextra 28789043 28789204 -215452 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 804 23 54 0 0 chrUextra 28789417 28789454 -215202 + AT_rich Low_complexity Low_complexity 1 37 0 1 804 975 69 0 0 chrUextra 28789759 28789904 -214752 + (ATAAG)n Simple_repeat Simple_repeat 1 145 0 1 804 828 133 0 0 chrUextra 28789918 28790098 -214558 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 804 1620 20 0 3 chrUextra 28790212 28790561 -214095 + (TCTA)n Simple_repeat Simple_repeat 1 347 0 1 804 2994 26 0 3 chrUextra 28790662 28791012 -213644 + R1_DM LINE R1 3458 3806 -1550 1 804 1620 0 0 0 chrUextra 28791113 28791363 -213293 + (TAGA)n Simple_repeat Simple_repeat 1 250 0 1 804 543 121 0 0 chrUextra 28791363 28791461 -213195 + (ATCG)n Simple_repeat Simple_repeat 2 100 0 1 804 1620 26 0 0 chrUextra 28792014 28792363 -212293 + (GAGAA)n Simple_repeat Simple_repeat 1 349 0 1 804 2031 73 34 17 chrUextra 28792464 28792814 -211842 + DMSAT6 Satellite Satellite 80 435 -35 1 804 2971 20 3 9 chrUextra 28792914 28793264 -211392 - LSU-rRNA_Dme rRNA rRNA -2429 1471 1124 1 804 34 24 0 0 chrUextra 28793531 28793572 -211084 + AT_rich Low_complexity Low_complexity 1 41 0 1 804 2962 29 0 6 chrUextra 28793814 28794164 -210492 + SSU-rRNA_Dme rRNA rRNA 1298 1645 -350 1 804 3090 3 3 9 chrUextra 28794716 28795064 -209592 + SSU-rRNA_Dme rRNA rRNA 1084 1429 -566 1 804 1527 20 0 0 chrUextra 28795613 28795962 -208694 + (GAGAA)n Simple_repeat Simple_repeat 1 349 0 1 804 701 12 0 11 chrUextra 28796511 28796598 -208058 + (TTCTC)n Simple_repeat Simple_repeat 1 86 0 1 804 864 128 0 0 chrUextra 28796622 28796801 -207855 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 1424 79 0 3 chrUextra 28796960 28797308 -207348 + (TAGA)n Simple_repeat Simple_repeat 1 346 0 1 804 1620 20 0 3 chrUextra 28797408 28797756 -206900 + (TTCTC)n Simple_repeat Simple_repeat 1 346 0 1 804 1620 0 0 0 chrUextra 28797965 28798204 -206452 + (CAAGA)n Simple_repeat Simple_repeat 1 239 0 1 804 1533 6 0 0 chrUextra 28798304 28798478 -206178 + (TAGA)n Simple_repeat Simple_repeat 1 174 0 1 804 392 283 0 0 chrUextra 28798492 28798644 -206012 + (TAGA)n Simple_repeat Simple_repeat 3 154 0 1 804 1537 179 11 20 chrUextra 28798752 28799100 -205556 - SAR_DM Satellite Satellite -676 796 452 1 804 2779 52 0 6 chrUextra 28799648 28799994 -204662 + R1_DM LINE R1 257 600 -4756 1 804 1287 87 0 0 chrUextra 28800094 28800439 -204217 + (CTTAT)n Simple_repeat Simple_repeat 1 345 0 1 804 1620 0 0 0 chrUextra 28800541 28800855 -203801 + (GAGAA)n Simple_repeat Simple_repeat 1 314 0 1 804 462 18 0 0 chrUextra 28800988 28801043 -203613 + (TTCTC)n Simple_repeat Simple_repeat 3 57 0 1 804 294 129 0 0 chrUextra 28801043 28801105 -203551 + (AGTAG)n Simple_repeat Simple_repeat 4 65 0 1 804 978 119 0 36 chrUextra 28801435 28801713 -202943 + (CTATT)n Simple_repeat Simple_repeat 1 268 0 1 804 603 0 0 0 chrUextra 28801715 28801782 -202874 + (TTCTC)n Simple_repeat Simple_repeat 4 70 0 1 804 2207 31 41 3 chrUextra 28801882 28802155 -202501 + PROTOP DNA P 224 507 -3973 1 804 672 14 0 0 chrUextra 28802155 28802229 -202427 - PROTOP_B DNA P 0 1153 1080 1 804 1423 23 0 16 chrUextra 28802329 28802650 -202006 + (TATAA)n Simple_repeat Simple_repeat 1 315 0 1 804 225 0 0 0 chrUextra 28802651 28802675 -201981 + DM1731_LTR LTR Copia 2 25 -311 1 804 1527 35 0 0 chrUextra 28802775 28803121 -201535 + (AATAG)n Simple_repeat Simple_repeat 1 346 0 1 804 1011 3 0 79 chrUextra 28803689 28804007 -200649 + (GAGAA)n Simple_repeat Simple_repeat 1 292 0 1 804 1473 68 0 9 chrUextra 28804116 28804459 -200197 + (TTCTC)n Simple_repeat Simple_repeat 1 340 0 1 804 1538 27 0 6 chrUextra 28804566 28804905 -199751 + (CACAA)n Simple_repeat Simple_repeat 1 336 0 1 804 1554 52 0 0 chrUextra 28805005 28805348 -199308 + (ATCG)n Simple_repeat Simple_repeat 1 343 0 1 804 227 158 0 0 chrUextra 28805671 28805709 -198947 + LSU-rRNA_Dme rRNA rRNA 2583 2620 -1280 1 804 22 56 0 0 chrUextra 28805722 28805758 -198898 + AT_rich Low_complexity Low_complexity 1 36 0 1 804 1620 9 0 0 chrUextra 28805911 28806243 -198413 + (GAGAA)n Simple_repeat Simple_repeat 1 332 0 1 804 1924 83 32 15 chrUextra 28806343 28806686 -197970 + DMSAT6 Satellite Satellite 42 390 -80 1 804 202 265 0 0 chrUextra 28806810 28806859 -197797 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 1419 34 0 0 chrUextra 28807245 28807422 -197234 + (ACTTG)n Simple_repeat Simple_repeat 3 179 0 1 804 1236 26 0 0 chrUextra 28807424 28807576 -197080 + (ACTAG)n Simple_repeat Simple_repeat 4 155 0 1 804 326 208 11 70 chrUextra 28807726 28808020 -196636 + CT-rich Low_complexity Low_complexity 1 276 0 1 804 1620 0 0 0 chrUextra 28808124 28808458 -196198 + (GAGAA)n Simple_repeat Simple_repeat 1 334 0 1 804 373 398 6 17 chrUextra 28809173 28809352 -195304 + GA-rich Low_complexity Low_complexity 2 178 0 1 804 948 69 0 19 chrUextra 28809457 28809619 -195037 + (TTCTC)n Simple_repeat Simple_repeat 1 159 0 1 804 873 69 0 0 chrUextra 28809629 28809759 -194897 + (GAGAA)n Simple_repeat Simple_repeat 5 134 0 1 804 240 35 0 0 chrUextra 28809770 28809799 -194857 + (ACTAG)n Simple_repeat Simple_repeat 5 33 0 1 804 1611 6 0 0 chrUextra 28809901 28810245 -194411 + (GAGAA)n Simple_repeat Simple_repeat 1 344 0 1 804 1473 62 0 0 chrUextra 28810347 28810688 -193968 + (TATAA)n Simple_repeat Simple_repeat 1 341 0 1 804 1415 71 0 6 chrUextra 28810788 28811111 -193545 + (TTCTC)n Simple_repeat Simple_repeat 1 321 0 1 804 601 134 65 0 chrUextra 28811231 28811572 -193084 + GA-rich Low_complexity Low_complexity 1 363 0 1 804 1620 9 0 3 chrUextra 28811674 28812016 -192640 + (GAGAA)n Simple_repeat Simple_repeat 1 341 0 1 804 378 188 0 0 chrUextra 28812359 28812455 -192201 + (TTATG)n Simple_repeat Simple_repeat 2 97 0 1 804 202 265 0 0 chrUextra 28812579 28812628 -192028 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 675 0 0 0 chrUextra 28813002 28813077 -191579 + (TATTG)n Simple_repeat Simple_repeat 2 76 0 1 804 528 56 0 0 chrUextra 28813077 28813148 -191508 + (TTATA)n Simple_repeat Simple_repeat 1 72 0 1 804 1590 6 0 0 chrUextra 28813148 28813326 -191330 + (CATTA)n Simple_repeat Simple_repeat 2 180 0 1 804 1587 27 0 0 chrUextra 28813444 28813785 -190871 + (CAATA)n Simple_repeat Simple_repeat 1 341 0 1 804 1101 64 0 12 chrUextra 28814326 28814667 -189989 + (ATAAG)n Simple_repeat Simple_repeat 1 336 0 1 804 990 116 0 0 chrUextra 28814769 28815108 -189548 + (CATGT)n Simple_repeat Simple_repeat 1 339 0 1 804 1071 56 0 0 chrUextra 28815208 28815351 -189305 + (CACAT)n Simple_repeat Simple_repeat 3 145 0 1 804 1383 50 0 0 chrUextra 28815351 28815531 -189125 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 1 804 195 129 0 0 chrUextra 28815649 28815680 -188976 + (CTAGG)n Simple_repeat Simple_repeat 2 32 0 1 804 1620 0 0 0 chrUextra 28815706 28815990 -188666 + (TTCTC)n Simple_repeat Simple_repeat 1 284 0 1 804 605 155 49 10 chrUextra 28816112 28816423 -188233 + CT-rich Low_complexity Low_complexity 1 323 0 1 804 1218 90 0 0 chrUextra 28816531 28816709 -187947 + (CATCT)n Simple_repeat Simple_repeat 3 180 0 1 804 735 137 0 0 chrUextra 28816711 28816872 -187784 + (TCTCG)n Simple_repeat Simple_repeat 5 165 0 1 804 653 161 41 9 chrUextra 28816972 28817311 -187345 + CT-rich Low_complexity Low_complexity 1 349 0 1 804 1536 18 0 4 chrUextra 28817412 28817692 -186964 + (GAGAA)n Simple_repeat Simple_repeat 1 278 0 1 804 414 0 0 0 chrUextra 28817851 28817897 -186759 + (TTCTC)n Simple_repeat Simple_repeat 1 46 0 1 804 198 0 0 0 chrUextra 28817902 28817924 -186732 + (CGAGA)n Simple_repeat Simple_repeat 4 25 0 1 804 1545 11 0 0 chrUextra 28817925 28818104 -186552 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 391 101 0 25 chrUextra 28818105 28818186 -186470 + (CGAGA)n Simple_repeat Simple_repeat 2 80 0 1 804 468 0 136 0 chrUextra 28818295 28818427 -186229 + (TC)n Simple_repeat Simple_repeat 2 151 0 1 804 559 144 60 6 chrUextra 28818451 28818619 -186037 + CT-rich Low_complexity Low_complexity 2 178 0 1 804 1232 62 6 0 chrUextra 28818728 28818907 -185749 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 804 984 103 0 0 chrUextra 28818907 28819062 -185594 + (GAAAA)n Simple_repeat Simple_repeat 1 156 0 1 804 1620 3 0 0 chrUextra 28819166 28819495 -185161 + (TCTA)n Simple_repeat Simple_repeat 1 329 0 1 804 1521 15 0 0 chrUextra 28819603 28819937 -184719 + (CTATT)n Simple_repeat Simple_repeat 1 334 0 1 804 378 130 0 78 chrUextra 28820040 28820114 -184542 + polypyrimidine Low_complexity Low_complexity 71 134 0 1 804 1296 51 0 0 chrUextra 28820114 28820291 -184365 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 804 378 130 0 78 chrUextra 28820291 28820358 -184298 + polypyrimidine Low_complexity Low_complexity 4 70 0 1 804 511 129 44 31 chrUextra 28821350 28821418 -183238 + polypurine Low_complexity Low_complexity 5 73 0 1 804 1375 29 6 11 chrUextra 28821418 28821595 -183061 + (GAGAA)n Simple_repeat Simple_repeat 5 180 0 1 804 511 129 44 31 chrUextra 28821595 28821686 -182970 + polypurine Low_complexity Low_complexity 74 166 0 1 804 1601 144 28 21 chrUextra 28821791 28822117 -182539 - SAR_DM Satellite Satellite -416 1056 729 1 804 1620 27 0 0 chrUextra 28822223 28822553 -182103 + (GAGAA)n Simple_repeat Simple_repeat 1 330 0 1 804 1917 5 0 0 chrUextra 28822785 28822992 -181664 - LSU-rRNA_Dme rRNA rRNA -5 3895 3689 1 804 233 0 0 161 chrUextra 28823530 28823741 -180915 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 804 297 239 18 0 chrUextra 28823743 28823856 -180800 + (CAAA)n Simple_repeat Simple_repeat 4 118 0 1 804 258 0 0 0 chrUextra 28823960 28823994 -180662 + NTS_DM Other Other 100 133 -107 1 804 1276 43 0 6 chrUextra 28823994 28824159 -180497 + NTS_DM Other Other 38 201 -39 1 804 600 38 12 36 chrUextra 28824211 28824294 -180362 + NTS_DM Other Other 25 105 -135 1 804 1488 55 10 0 chrUextra 28824394 28824705 -179951 + (GAGAA)n Simple_repeat Simple_repeat 1 313 0 1 804 1782 87 22 10 chrUextra 28824846 28825158 -179498 - DMSAT6 Satellite Satellite -23 447 132 1 804 2248 72 3 3 chrUextra 28825262 28825596 -179060 + PROTOP DNA P 490 823 -3657 1 804 1679 18 18 22 chrUextra 28825696 28825919 -178737 + NTS_DM Other Other 19 240 0 1 804 994 18 0 0 chrUextra 28825919 28826030 -178626 + NTS_DM Other Other 1 111 -129 1 804 1422 42 0 0 chrUextra 28826130 28826393 -178263 + (CTTAT)n Simple_repeat Simple_repeat 1 263 0 1 804 360 97 0 0 chrUextra 28826398 28826460 -178196 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 1 804 1430 52 0 6 chrUextra 28826563 28826894 -177762 + (CACAA)n Simple_repeat Simple_repeat 1 329 0 1 804 1620 0 0 0 chrUextra 28826996 28827285 -177371 + (GAGAA)n Simple_repeat Simple_repeat 1 289 0 1 804 1545 23 0 0 chrUextra 28827862 28828165 -176491 + (TATAA)n Simple_repeat Simple_repeat 1 303 0 1 804 1580 9 0 3 chrUextra 28828728 28829057 -175599 + (GAGAA)n Simple_repeat Simple_repeat 1 328 0 1 804 1494 34 0 0 chrUextra 28829160 28829397 -175259 + (CACAA)n Simple_repeat Simple_repeat 1 237 0 1 804 644 0 0 13 chrUextra 28829415 28829492 -175164 + (CACAA)n Simple_repeat Simple_repeat 3 78 0 1 804 1100 46 0 7 chrUextra 28829592 28829744 -174912 + (TTCTC)n Simple_repeat Simple_repeat 1 151 0 1 804 939 86 0 0 chrUextra 28829753 28829905 -174751 + (GAGAA)n Simple_repeat Simple_repeat 2 153 0 1 804 261 157 0 44 chrUextra 28830030 28830070 -174586 + polypurine Low_complexity Low_complexity 1 38 0 1 804 1041 96 0 0 chrUextra 28830070 28830248 -174408 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 1 804 261 157 0 44 chrUextra 28830248 28830320 -174336 + GA-rich Low_complexity Low_complexity 39 108 0 1 804 573 15 0 0 chrUextra 28830456 28830522 -174134 + (CAAGA)n Simple_repeat Simple_repeat 3 68 0 1 804 1028 30 0 8 chrUextra 28830888 28831021 -173635 + (TTCTC)n Simple_repeat Simple_repeat 1 132 0 1 804 984 106 0 0 chrUextra 28831038 28831217 -173439 + (CGAGA)n Simple_repeat Simple_repeat 2 180 0 1 804 429 36 0 0 chrUextra 28831319 28831374 -173282 + (TTCTC)n Simple_repeat Simple_repeat 5 59 0 1 804 737 146 38 8 chrUextra 28831382 28831650 -173006 + GA-rich Low_complexity Low_complexity 1 276 0 1 804 1521 30 0 4 chrUextra 28831759 28832025 -172631 + (TTCTC)n Simple_repeat Simple_repeat 1 264 0 1 804 228 100 0 0 chrUextra 28832041 28832081 -172575 + (CAGTA)n Simple_repeat Simple_repeat 3 42 0 1 804 1620 0 0 0 chrUextra 28832181 28832485 -172171 + (GAGAA)n Simple_repeat Simple_repeat 1 304 0 1 804 766 87 0 14 chrUextra 28832612 28832752 -171904 + (TCTTG)n Simple_repeat Simple_repeat 3 140 0 1 804 1620 0 0 0 chrUextra 28832760 28832940 -171716 + (CTAGT)n Simple_repeat Simple_repeat 1 180 0 1 804 551 0 124 12 chrUextra 28833046 28833207 -171449 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 804 602 151 40 17 chrUextra 28833196 28833371 -171285 + GA-rich Low_complexity Low_complexity 2 180 0 1 804 381 22 0 0 chrUextra 28833474 28833520 -171136 + (TTCTC)n Simple_repeat Simple_repeat 5 50 0 1 804 551 0 128 8 chrUextra 28833532 28833804 -170852 + (GA)n Simple_repeat Simple_repeat 1 304 0 1 804 202 265 0 0 chrUextra 28833913 28833962 -170694 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 2362 45 0 3 chrUextra 28834336 28834667 -169989 + PROTOP_A DNA P 378 707 -398 1 804 276 111 0 0 chrUextra 28834767 28834812 -169844 + (CTG)n Simple_repeat Simple_repeat 1 45 0 1 804 663 0 0 0 chrUextra 28834812 28834901 -169755 - ROO_I LTR Pao -7616 640 552 1 804 610 206 0 11 chrUextra 28834906 28835097 -169559 - ROO_I LTR Pao -7680 576 388 1 804 336 239 19 75 chrUextra 28835198 28835525 -169131 + CT-rich Low_complexity Low_complexity 1 308 0 1 100 1566 0 0 0 chrUextra 28835782 28835956 -168700 + (TTCTC)n Simple_repeat Simple_repeat 5 178 0 1 805 1547 17 0 7 chrUextra 28836084 28836385 -168271 + (TTCTC)n Simple_repeat Simple_repeat 1 299 0 1 805 1599 15 0 0 chrUextra 28836488 28836814 -167842 + (TCTA)n Simple_repeat Simple_repeat 1 326 0 1 805 544 135 57 22 chrUextra 28836923 28837242 -167414 + GA-rich Low_complexity Low_complexity 1 330 0 1 805 1300 71 0 12 chrUextra 28837343 28837672 -166984 + (TAGA)n Simple_repeat Simple_repeat 1 324 0 1 805 1620 3 0 0 chrUextra 28838201 28838530 -166126 + (GAGAA)n Simple_repeat Simple_repeat 1 329 0 1 805 1620 0 0 0 chrUextra 28838651 28838831 -165825 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 564 110 64 29 chrUextra 28839059 28839379 -165277 + CT-rich Low_complexity Low_complexity 1 331 0 1 805 489 190 0 0 chrUextra 28839912 28840012 -164644 + (CTGTG)n Simple_repeat Simple_repeat 4 103 0 1 805 317 26 0 0 chrUextra 28840012 28840050 -164606 + (CAACG)n Simple_repeat Simple_repeat 3 40 0 1 805 1419 34 0 0 chrUextra 28840050 28840227 -164429 + (CACAA)n Simple_repeat Simple_repeat 3 179 0 1 805 202 265 0 0 chrUextra 28840345 28840394 -164262 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 812 65 0 8 chrUextra 28840783 28840908 -163748 + (TCTTG)n Simple_repeat Simple_repeat 4 127 0 1 805 1251 62 0 0 chrUextra 28840915 28841093 -163563 + (CATGT)n Simple_repeat Simple_repeat 3 180 0 1 805 307 51 0 0 chrUextra 28841193 28841232 -163424 - NTS_DM Other Other -176 64 26 1 805 1142 37 0 18 chrUextra 28841289 28841456 -163200 - NTS_DM Other Other -39 201 38 1 805 461 47 0 0 chrUextra 28841456 28841520 -163136 - NTS_DM Other Other -107 133 70 1 805 274 0 0 159 chrUextra 28842504 28842642 -162014 + (CAAAG)n Simple_repeat Simple_repeat 1 116 0 1 805 183 0 0 159 chrUextra 28842644 28842795 -161861 + (CAAGA)n Simple_repeat Simple_repeat 2 128 0 1 805 345 11 0 163 chrUextra 28842897 28843112 -161544 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 805 221 15 308 0 chrUextra 28843087 28843220 -161436 + (TCCA)n Simple_repeat Simple_repeat 3 176 0 1 805 1620 0 0 0 chrUextra 28843747 28843955 -160701 + (TAGA)n Simple_repeat Simple_repeat 1 208 0 1 805 468 152 0 0 chrUextra 28843955 28844072 -160584 + (ATCG)n Simple_repeat Simple_repeat 3 120 0 1 805 1250 55 0 4 chrUextra 28844172 28844429 -160227 + (TTCTC)n Simple_repeat Simple_repeat 1 255 0 1 805 315 65 0 0 chrUextra 28844429 28844475 -160181 + (CACAA)n Simple_repeat Simple_repeat 5 50 0 1 805 198 0 0 0 chrUextra 28844475 28844497 -160159 + (GAGAA)n Simple_repeat Simple_repeat 1 22 0 1 805 1348 32 0 6 chrUextra 28844597 28844922 -159734 + (TTCTC)n Simple_repeat Simple_repeat 1 322 0 1 805 2710 9 0 3 chrUextra 28845022 28845346 -159310 + R1_DM LINE R1 4607 4929 -427 1 805 34 0 0 0 chrUextra 28845446 28845480 -159176 + AT_rich Low_complexity Low_complexity 1 34 0 1 805 339 51 114 14 chrUextra 28845523 28845663 -158993 + (TA)n Simple_repeat Simple_repeat 2 155 0 1 805 668 35 0 0 chrUextra 28845683 28845770 -158886 - DIVER_LTR LTR Pao 0 224 138 1 805 705 12 0 0 chrUextra 28845870 28845952 -158704 + (TTCTC)n Simple_repeat Simple_repeat 2 83 0 1 805 1521 26 0 9 chrUextra 28845956 28846186 -158470 + (GAGAA)n Simple_repeat Simple_repeat 1 228 0 1 805 534 16 0 0 chrUextra 28846294 28846357 -158299 + (TTGTG)n Simple_repeat Simple_repeat 1 63 0 1 805 1227 67 0 0 chrUextra 28846358 28846537 -158119 + (ATGTG)n Simple_repeat Simple_repeat 1 179 0 1 805 561 88 0 0 chrUextra 28846538 28846618 -158038 + (TTGTG)n Simple_repeat Simple_repeat 1 80 0 1 805 2138 44 6 9 chrUextra 28846718 28847042 -157614 + PROTOP_A DNA P 497 819 -286 1 805 636 130 56 0 chrUextra 28847212 28847373 -157283 + CT-rich Low_complexity Low_complexity 5 174 0 1 805 414 79 0 0 chrUextra 28847399 28847462 -157194 + (GAGAA)n Simple_repeat Simple_repeat 2 64 0 1 805 1224 63 0 0 chrUextra 28847565 28847820 -156836 + (GAGAA)n Simple_repeat Simple_repeat 1 255 0 1 805 311 119 0 15 chrUextra 28847820 28847888 -156768 + (CGAGA)n Simple_repeat Simple_repeat 2 68 0 1 805 461 167 6 85 chrUextra 28848411 28848729 -155927 + CT-rich Low_complexity Low_complexity 1 293 0 1 805 1279 48 3 3 chrUextra 28848834 28849157 -155499 + (CTTAT)n Simple_repeat Simple_repeat 1 323 0 1 805 1269 90 0 0 chrUextra 28849258 28849573 -155083 + (CAATA)n Simple_repeat Simple_repeat 1 315 0 1 805 1620 0 0 0 chrUextra 28849694 28849874 -154782 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 202 265 0 0 chrUextra 28850103 28850152 -154504 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 831 37 0 0 chrUextra 28850524 28850631 -154025 + (TTCTC)n Simple_repeat Simple_repeat 4 110 0 1 805 1521 17 0 0 chrUextra 28850662 28850842 -153814 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1572 104 47 16 chrUextra 28850947 28851268 -153388 + DMSAT6 Satellite Satellite 9 339 -131 1 805 1663 92 41 16 chrUextra 28851370 28851690 -152966 - DMSAT6 Satellite Satellite -64 406 79 1 805 28 48 0 0 chrUextra 28851843 28851885 -152771 + AT_rich Low_complexity Low_complexity 1 42 0 1 805 1116 17 0 49 chrUextra 28852212 28852396 -152260 + (TTCTC)n Simple_repeat Simple_repeat 2 176 0 1 805 782 41 0 31 chrUextra 28852407 28852534 -152122 + (TTCTC)n Simple_repeat Simple_repeat 5 127 0 1 805 1117 58 6 28 chrUextra 28852640 28852819 -151837 + (TTCTC)n Simple_repeat Simple_repeat 5 179 0 1 805 224 14 107 27 chrUextra 28852821 28852896 -151760 + (TC)n Simple_repeat Simple_repeat 2 82 0 1 805 21 0 0 0 chrUextra 28853311 28853332 -151324 + AT_rich Low_complexity Low_complexity 1 21 0 1 805 1620 0 0 0 chrUextra 28853528 28853797 -150859 + (TTCTC)n Simple_repeat Simple_repeat 1 269 0 1 805 572 11 0 137 chrUextra 28853903 28854218 -150438 + (TAAAAA)n Simple_repeat Simple_repeat 1 271 0 1 805 1620 0 0 0 chrUextra 28854318 28854594 -150062 + (GAGAA)n Simple_repeat Simple_repeat 1 276 0 1 805 336 24 0 0 chrUextra 28854595 28854636 -150020 + (ATAAG)n Simple_repeat Simple_repeat 5 45 0 1 805 436 0 137 0 chrUextra 28854744 28854868 -149788 + (TC)n Simple_repeat Simple_repeat 2 142 0 1 805 581 147 53 6 chrUextra 28854844 28855015 -149641 + CT-rich Low_complexity Low_complexity 1 179 0 1 805 346 159 0 0 chrUextra 28855159 28855228 -149428 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 1 805 395 0 0 163 chrUextra 28855264 28855479 -149177 + (CTATG)n Simple_repeat Simple_repeat 1 180 0 1 805 1340 39 0 6 chrUextra 28855582 28855762 -148894 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 805 824 28 0 9 chrUextra 28855785 28855893 -148763 + (GAGAA)n Simple_repeat Simple_repeat 4 110 0 1 805 2426 22 3 12 chrUextra 28855999 28856319 -148337 - FB4_DM DNA Tc1 -136 3953 3637 1 805 865 11 0 87 chrUextra 28856419 28856615 -148041 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 805 345 83 8 76 chrUextra 28856615 28856733 -147923 + GA-rich Low_complexity Low_complexity 5 114 0 1 805 581 0 0 14 chrUextra 28856845 28856915 -147741 + (TTCTC)n Simple_repeat Simple_repeat 5 73 0 1 805 1479 22 0 0 chrUextra 28856935 28857159 -147497 + (TTCTC)n Simple_repeat Simple_repeat 1 224 0 1 805 1401 6 0 0 chrUextra 28857259 28857417 -147239 + (GAGAA)n Simple_repeat Simple_repeat 2 159 0 1 805 506 52 0 136 chrUextra 28857679 28857996 -146660 + A-rich Low_complexity Low_complexity 1 273 0 1 805 1382 58 0 4 chrUextra 28858099 28858380 -146276 + (TTCTC)n Simple_repeat Simple_repeat 1 279 0 1 805 243 79 0 0 chrUextra 28858381 28858419 -146237 + (CATCT)n Simple_repeat Simple_repeat 3 40 0 1 805 1554 8 0 8 chrUextra 28858519 28858760 -145896 + (ACATG)n Simple_repeat Simple_repeat 1 238 0 1 805 437 80 0 13 chrUextra 28858762 28858838 -145818 + (AGATG)n Simple_repeat Simple_repeat 4 78 0 1 805 1620 13 0 0 chrUextra 28858940 28859255 -145401 + (GAGAA)n Simple_repeat Simple_repeat 1 315 0 1 805 588 6 0 137 chrUextra 28859358 28859563 -145093 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 1 805 266 167 123 14 chrUextra 28859518 28859664 -144992 + (CAAA)n Simple_repeat Simple_repeat 2 163 0 1 805 1620 0 0 0 chrUextra 28859776 28859956 -144700 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 805 1004 0 9 0 chrUextra 28859979 28860095 -144561 + (CGATA)n Simple_repeat Simple_repeat 1 117 0 1 805 552 30 0 0 chrUextra 28860195 28860261 -144395 + (CACAA)n Simple_repeat Simple_repeat 4 69 0 1 805 1383 62 0 4 chrUextra 28860272 28860513 -144143 + (CACAA)n Simple_repeat Simple_repeat 1 240 0 1 805 1620 4 0 0 chrUextra 28860613 28860862 -143794 + (TCTTG)n Simple_repeat Simple_repeat 1 249 0 1 805 1620 0 0 0 chrUextra 28861031 28861305 -143351 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 805 453 19 0 0 chrUextra 28861449 28861503 -143153 + (CTTAT)n Simple_repeat Simple_repeat 2 55 0 1 805 1430 41 0 4 chrUextra 28861514 28861764 -142892 + (CTTAT)n Simple_repeat Simple_repeat 1 248 0 1 805 215 4 0 161 chrUextra 28861868 28862181 -142475 + (TATAG)n Simple_repeat Simple_repeat 1 262 0 1 805 1446 38 0 0 chrUextra 28862283 28862600 -142056 + (AATAG)n Simple_repeat Simple_repeat 1 317 0 1 805 1545 15 0 4 chrUextra 28862700 28862961 -141695 + (CTATT)n Simple_repeat Simple_repeat 1 260 0 1 805 306 50 0 0 chrUextra 28862977 28863017 -141639 + (CTATT)n Simple_repeat Simple_repeat 1 40 0 1 805 395 0 0 163 chrUextra 28863627 28863842 -140814 + (CATAG)n Simple_repeat Simple_repeat 1 180 0 1 805 543 53 0 0 chrUextra 28863949 28864024 -140632 + (TTCTC)n Simple_repeat Simple_repeat 5 79 0 1 805 1239 62 0 0 chrUextra 28864040 28864218 -140438 + (GAGAA)n Simple_repeat Simple_repeat 3 180 0 1 805 225 108 0 0 chrUextra 28864228 28864265 -140391 + (CGAGA)n Simple_repeat Simple_repeat 2 38 0 1 805 2634 16 3 0 chrUextra 28864781 28865097 -139559 + NOMAD_I LTR Gypsy 2538 2854 -3718 1 805 1422 73 0 3 chrUextra 28865197 28865510 -139146 + (TAGA)n Simple_repeat Simple_repeat 1 311 0 1 805 1620 0 0 0 chrUextra 28865622 28865802 -138854 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 961 165 9 27 chrUextra 28866029 28866253 -138403 + SAR_DM Satellite Satellite 837 1056 -416 1 805 324 0 0 0 chrUextra 28866253 28866289 -138367 + (T)n Simple_repeat Simple_repeat 1 36 0 1 805 305 157 0 0 chrUextra 28866291 28866342 -138314 + IVK_DM LINE I 1 51 -5351 1 805 567 71 0 0 chrUextra 28866448 28866533 -138123 + (TTCTC)n Simple_repeat Simple_repeat 4 88 0 1 805 1533 14 0 0 chrUextra 28866535 28866761 -137895 + (CTTAT)n Simple_repeat Simple_repeat 1 226 0 1 805 1470 25 0 0 chrUextra 28866861 28867176 -137480 + (ATAAG)n Simple_repeat Simple_repeat 1 315 0 1 805 631 97 9 9 chrUextra 28867276 28867339 -137317 + (AGATG)n Simple_repeat Simple_repeat 2 65 0 1 805 1455 28 0 0 chrUextra 28867339 28867519 -137137 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 631 97 9 9 chrUextra 28867519 28867570 -137086 + (AGATG)n Simple_repeat Simple_repeat 1 51 0 1 805 36 0 0 0 chrUextra 28867860 28867896 -136760 + AT_rich Low_complexity Low_complexity 1 36 0 1 805 660 134 47 6 chrUextra 28868114 28868286 -136370 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 287 0 0 134 chrUextra 28868295 28868414 -136242 + (CAGAGA)n Simple_repeat Simple_repeat 6 108 0 1 805 1474 18 0 11 chrUextra 28868524 28868807 -135849 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 805 1158 78 0 0 chrUextra 28868942 28869122 -135534 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 489 88 0 0 chrUextra 28869123 28869203 -135453 + (CATCT)n Simple_repeat Simple_repeat 3 82 0 1 805 342 0 0 0 chrUextra 28869210 28869248 -135408 + (GAGAA)n Simple_repeat Simple_repeat 2 39 0 1 805 1481 17 0 6 chrUextra 28869367 28869548 -135108 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 597 76 0 0 chrUextra 28869553 28869645 -135011 + (ATAAG)n Simple_repeat Simple_repeat 5 96 0 1 805 1422 39 0 0 chrUextra 28870176 28870485 -134171 + (GAGAA)n Simple_repeat Simple_repeat 1 309 0 1 805 1429 22 0 16 chrUextra 28870592 28870775 -133881 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 741 65 0 0 chrUextra 28870795 28870903 -133753 + (GAGAA)n Simple_repeat Simple_repeat 3 110 0 1 805 233 0 0 161 chrUextra 28871006 28871217 -133439 + (CAAGA)n Simple_repeat Simple_repeat 2 178 0 1 805 460 224 0 10 chrUextra 28871217 28871316 -133340 + (CAGAGA)n Simple_repeat Simple_repeat 4 101 0 1 805 1413 68 0 6 chrUextra 28871416 28871729 -132927 + (TTCTC)n Simple_repeat Simple_repeat 1 311 0 1 805 1210 78 0 7 chrUextra 28871830 28872140 -132516 + (TTCTC)n Simple_repeat Simple_repeat 1 307 0 1 805 422 174 55 9 chrUextra 28872244 28872472 -132184 + GA-rich Low_complexity Low_complexity 1 238 0 1 805 237 203 34 0 chrUextra 28872495 28872554 -132102 + A-rich Low_complexity Low_complexity 2 62 0 1 805 1296 71 0 0 chrUextra 28872685 28872917 -131739 + (TTCTC)n Simple_repeat Simple_repeat 1 232 0 1 805 396 0 0 0 chrUextra 28872924 28872968 -131688 + (GAGAA)n Simple_repeat Simple_repeat 5 48 0 1 805 375 35 0 124 chrUextra 28873068 28873197 -131459 + T-rich Low_complexity Low_complexity 2 114 0 1 805 227 245 0 0 chrUextra 28873504 28873553 -131103 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 24 0 0 0 chrUextra 28874416 28874440 -130216 + AT_rich Low_complexity Low_complexity 1 24 0 1 805 1548 0 0 0 chrUextra 28874717 28874934 -129722 + (GAGAA)n Simple_repeat Simple_repeat 1 217 0 1 805 1545 26 0 3 chrUextra 28875129 28875440 -129216 + (TTCTC)n Simple_repeat Simple_repeat 1 310 0 1 805 1620 0 0 0 chrUextra 28875541 28875745 -128911 + (TAGA)n Simple_repeat Simple_repeat 1 204 0 1 805 351 157 0 0 chrUextra 28875771 28875841 -128815 + (TAGA)n Simple_repeat Simple_repeat 3 72 0 1 805 1587 6 0 0 chrUextra 28875952 28876132 -128524 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 805 777 93 0 0 chrUextra 28876133 28876262 -128394 + (ACTTG)n Simple_repeat Simple_repeat 1 129 0 1 805 1359 55 0 0 chrUextra 28876365 28876674 -127982 + (TTGTG)n Simple_repeat Simple_repeat 1 309 0 1 805 491 247 0 0 chrUextra 28876783 28876957 -127699 + (TTAA)n Simple_repeat Simple_repeat 2 175 0 1 805 1620 0 0 0 chrUextra 28877185 28877464 -127192 + (GAGAA)n Simple_repeat Simple_repeat 1 279 0 1 805 1335 58 0 3 chrUextra 28878415 28878717 -125939 + (GAGAA)n Simple_repeat Simple_repeat 1 300 0 1 805 1620 19 0 0 chrUextra 28878825 28879084 -125572 + (GAGAA)n Simple_repeat Simple_repeat 1 259 0 1 805 198 0 0 160 chrUextra 28879255 28879424 -125232 + (TCTTG)n Simple_repeat Simple_repeat 2 143 0 1 805 1620 3 0 7 chrUextra 28879645 28879942 -124714 + (TTCTC)n Simple_repeat Simple_repeat 1 294 0 1 805 2623 0 3 3 chrUextra 28880054 28880363 -124293 - R1_DM LINE R1 -2026 3330 3022 1 805 549 42 0 0 chrUextra 28880463 28880535 -124121 + (GAGAA)n Simple_repeat Simple_repeat 5 76 0 1 805 232 0 0 0 chrUextra 28880535 28880569 -124087 - Copia_LTR LTR Copia 0 276 243 1 805 1636 5 0 5 chrUextra 28880569 28880772 -123884 - Copia_LTR LTR Copia 0 276 75 1 805 1413 52 0 14 chrUextra 28880872 28881165 -123491 + (GAGAA)n Simple_repeat Simple_repeat 1 289 0 1 805 266 301 0 0 chrUextra 28881333 28881416 -123240 + A-rich Low_complexity Low_complexity 1 83 0 1 805 517 146 67 0 chrUextra 28881417 28881582 -123074 + GA-rich Low_complexity Low_complexity 5 180 0 1 805 204 125 0 0 chrUextra 28881692 28881724 -122932 + (CAGGT)n Simple_repeat Simple_repeat 5 36 0 1 805 1620 12 0 0 chrUextra 28881751 28881996 -122660 + (TTCTC)n Simple_repeat Simple_repeat 1 245 0 1 805 941 110 0 3 chrUextra 28882101 28882397 -122259 + (TTCTC)n Simple_repeat Simple_repeat 1 294 0 1 805 613 190 0 0 chrUextra 28882659 28882780 -121876 + DMRT1B LINE R1 2589 2709 -2474 1 805 284 116 0 0 chrUextra 28882771 28882814 -121842 + DMRT1B LINE R1 3671 3713 -1470 1 805 273 0 0 158 chrUextra 28882917 28883050 -121606 + (CAAGA)n Simple_repeat Simple_repeat 2 113 0 1 805 447 192 0 0 chrUextra 28883052 28883219 -121437 + (CATATA)n Simple_repeat Simple_repeat 6 172 0 1 805 1340 66 0 7 chrUextra 28883322 28883626 -121030 + (TTGTG)n Simple_repeat Simple_repeat 1 301 0 1 805 1455 30 0 0 chrUextra 28883730 28883964 -120692 + (CTTAT)n Simple_repeat Simple_repeat 1 234 0 1 805 489 17 0 0 chrUextra 28883964 28884021 -120635 + (TTCTC)n Simple_repeat Simple_repeat 5 62 0 1 805 1620 30 0 0 chrUextra 28884137 28884444 -120212 + (TTCTC)n Simple_repeat Simple_repeat 1 307 0 1 805 1566 0 0 0 chrUextra 28884544 28884718 -119938 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 805 2165 65 0 3 chrUextra 28884951 28885258 -119398 - DM176_I LTR Gypsy -2579 3841 3536 1 805 551 3 124 7 chrUextra 28885358 28885664 -118992 + (TA)n Simple_repeat Simple_repeat 1 341 0 1 805 498 17 0 0 chrUextra 28885764 28885823 -118833 + (TTCTC)n Simple_repeat Simple_repeat 5 63 0 1 805 1419 12 0 0 chrUextra 28885835 28886000 -118656 + (GAGAA)n Simple_repeat Simple_repeat 1 165 0 1 805 1535 44 0 15 chrUextra 28886170 28886376 -118280 - DOC3_DM LINE Jockey -64 4676 4474 1 805 598 31 0 10 chrUextra 28886378 28886476 -118180 - FW_DM LINE Jockey 0 4692 4596 1 805 1455 28 0 0 chrUextra 28886579 28886759 -117897 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 1128 86 0 0 chrUextra 28886982 28887288 -117368 + (GAGAA)n Simple_repeat Simple_repeat 1 306 0 1 805 1620 0 0 0 chrUextra 28887388 28887597 -117059 + (GAGAA)n Simple_repeat Simple_repeat 1 209 0 1 805 1521 37 0 4 chrUextra 28887794 28888067 -116589 + (GAGAA)n Simple_repeat Simple_repeat 1 272 0 1 805 202 265 0 0 chrUextra 28888218 28888267 -116389 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 396 296 0 0 chrUextra 28889022 28889276 -115380 + (CGA)n Simple_repeat Simple_repeat 1 254 0 1 805 1560 17 0 0 chrUextra 28889413 28889716 -114940 + (ATAAG)n Simple_repeat Simple_repeat 1 303 0 1 805 1620 0 0 0 chrUextra 28889816 28890075 -114581 + (CAAAA)n Simple_repeat Simple_repeat 1 259 0 1 805 1401 61 0 0 chrUextra 28890230 28890524 -114132 + (GAGAA)n Simple_repeat Simple_repeat 1 294 0 1 805 1312 44 0 7 chrUextra 28890626 28890928 -113728 + (AATAG)n Simple_repeat Simple_repeat 1 299 0 1 805 944 75 22 33 chrUextra 28891028 28891208 -113448 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 805 571 108 49 16 chrUextra 28891208 28891331 -113325 + GA-rich Low_complexity Low_complexity 3 129 0 1 805 219 227 0 0 chrUextra 28891431 28891497 -113159 + (CAAA)n Simple_repeat Simple_repeat 1 66 0 1 805 233 0 0 161 chrUextra 28891511 28891722 -112934 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 805 2024 10 36 36 chrUextra 28891834 28892137 -112519 - MDG1_I LTR Gypsy -5233 1363 1061 1 805 1300 36 0 9 chrUextra 28892237 28892462 -112194 + (TTCTC)n Simple_repeat Simple_repeat 1 222 0 1 805 546 63 0 0 chrUextra 28892462 28892540 -112116 + (CTACT)n Simple_repeat Simple_repeat 1 79 0 1 805 1422 44 0 3 chrUextra 28892646 28892943 -111713 + (TTGTG)n Simple_repeat Simple_repeat 1 296 0 1 805 441 0 0 138 chrUextra 28893044 28893240 -111416 + (TCTCTG)n Simple_repeat Simple_repeat 6 174 0 1 805 230 134 60 0 chrUextra 28893276 28893343 -111313 + CT-rich Low_complexity Low_complexity 5 75 0 1 805 2566 0 0 7 chrUextra 28893446 28893748 -110908 + SSU-rRNA_Dme rRNA rRNA 840 1139 -856 1 805 1374 64 0 0 chrUextra 28893853 28894150 -110506 + (CACAA)n Simple_repeat Simple_repeat 1 297 0 1 805 1620 0 0 0 chrUextra 28895054 28895308 -109348 + (GAGAA)n Simple_repeat Simple_repeat 1 254 0 1 805 1368 35 0 0 chrUextra 28895456 28895630 -109026 + (TAGA)n Simple_repeat Simple_repeat 4 177 0 1 805 876 87 0 0 chrUextra 28895630 28895757 -108899 + (CGAT)n Simple_repeat Simple_repeat 1 127 0 1 805 1620 0 0 0 chrUextra 28895858 28896116 -108540 + (GAGAA)n Simple_repeat Simple_repeat 1 258 0 1 805 459 0 0 0 chrUextra 28896260 28896311 -108345 + (TTCTC)n Simple_repeat Simple_repeat 1 51 0 1 805 486 46 0 0 chrUextra 28896311 28896375 -108281 + (AGCTG)n Simple_repeat Simple_repeat 4 68 0 1 805 1422 33 0 0 chrUextra 28896377 28896557 -108099 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1554 37 0 0 chrUextra 28896661 28896960 -107696 + (TTCTC)n Simple_repeat Simple_repeat 1 299 0 1 805 1587 30 0 0 chrUextra 28897061 28897360 -107296 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 805 1620 0 0 0 chrUextra 28897460 28897679 -106977 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 805 1345 24 30 30 chrUextra 28897859 28898158 -106498 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 805 577 142 59 6 chrUextra 28898264 28898434 -106222 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 224 0 125 0 chrUextra 28898422 28898478 -106178 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 805 260 13 130 0 chrUextra 28898478 28898555 -106101 + (CAGA)n Simple_repeat Simple_repeat 2 88 0 1 805 1029 8 0 0 chrUextra 28898657 28898775 -105881 + (TAGA)n Simple_repeat Simple_repeat 2 119 0 1 805 1358 55 0 6 chrUextra 28899058 28899239 -105417 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 1 805 252 0 0 0 chrUextra 28899239 28899266 -105390 + (TCCTG)n Simple_repeat Simple_repeat 2 29 0 1 805 192 135 0 0 chrUextra 28899270 28899307 -105349 + (TTCCC)n Simple_repeat Simple_repeat 4 40 0 1 805 282 87 0 0 chrUextra 28899308 28899354 -105302 + (CGCTG)n Simple_repeat Simple_repeat 4 49 0 1 805 1620 17 0 3 chrUextra 28899454 28899750 -104906 + (GAGAA)n Simple_repeat Simple_repeat 1 294 0 1 805 1557 17 0 0 chrUextra 28900250 28900548 -104108 + (TTCTC)n Simple_repeat Simple_repeat 1 298 0 1 805 201 0 122 0 chrUextra 28900648 28900697 -103959 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 805 574 136 59 6 chrUextra 28900712 28900882 -103774 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 1602 14 0 0 chrUextra 28901045 28901342 -103314 + (GAGAA)n Simple_repeat Simple_repeat 1 297 0 1 805 1620 0 0 0 chrUextra 28901442 28901691 -102965 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 1 805 1503 17 0 7 chrUextra 28901838 28902134 -102522 + (TTCTC)n Simple_repeat Simple_repeat 1 293 0 1 805 200 6 0 161 chrUextra 28902264 28902475 -102181 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 805 2026 34 10 7 chrUextra 28902630 28902926 -101730 + PROTOP_A DNA P 529 825 -280 1 805 1620 0 0 0 chrUextra 28903029 28903247 -101409 + (TAGA)n Simple_repeat Simple_repeat 1 218 0 1 805 492 32 0 0 chrUextra 28903258 28903320 -101336 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 1 805 2301 10 0 27 chrUextra 28903422 28903718 -100938 + G_DM LINE Jockey 3999 4286 -60 1 805 1224 51 0 0 chrUextra 28903818 28904052 -100604 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 805 243 79 0 0 chrUextra 28904075 28904113 -100543 + (CAGAA)n Simple_repeat Simple_repeat 2 39 0 1 805 681 95 0 0 chrUextra 28904213 28904329 -100327 + (ACTAG)n Simple_repeat Simple_repeat 4 119 0 1 805 1248 67 0 0 chrUextra 28904329 28904508 -100148 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 805 649 157 12 9 chrUextra 28904609 28904901 -99755 + SAR_DM Satellite Satellite 1 293 -738 1 805 502 11 0 165 chrUextra 28905067 28905279 -99377 + A-rich Low_complexity Low_complexity 2 178 0 1 805 1482 51 0 4 chrUextra 28905408 28905692 -98964 + (GAGAA)n Simple_repeat Simple_repeat 1 282 0 1 805 1427 49 0 3 chrUextra 28905794 28906086 -98570 + (CACAA)n Simple_repeat Simple_repeat 1 290 0 1 805 1595 55 0 17 chrUextra 28906186 28906480 -98176 + NOMAD_I LTR Gypsy 5565 5853 -719 1 805 630 37 0 0 chrUextra 28906580 28906661 -97995 + (GAGAA)n Simple_repeat Simple_repeat 2 82 0 1 805 1262 6 0 39 chrUextra 28906692 28906874 -97782 + (CAAG)n Simple_repeat Simple_repeat 2 176 0 1 805 1220 185 31 43 chrUextra 28906974 28907267 -97389 - SAR_DM Satellite Satellite -873 289 1 1 805 1232 7 0 0 chrUextra 28907367 28907512 -97144 - DMRT1B LINE R1 -557 4626 4482 1 805 1332 0 0 0 chrUextra 28907512 28907660 -96996 + (TTGTG)n Simple_repeat Simple_repeat 5 152 0 1 805 1455 50 0 7 chrUextra 28907760 28908044 -96612 + (TTCTC)n Simple_repeat Simple_repeat 1 282 0 1 805 2394 17 0 0 chrUextra 28908153 28908446 -96210 + ROO_I LTR Pao 3691 3983 -4273 1 805 1112 84 0 11 chrUextra 28908558 28908738 -95918 + (AATAG)n Simple_repeat Simple_repeat 1 178 0 1 805 900 0 0 0 chrUextra 28908739 28908839 -95817 + (GAGAA)n Simple_repeat Simple_repeat 2 101 0 1 805 1124 29 23 23 chrUextra 28908939 28909114 -95542 + NTS_DM Other Other 66 240 0 1 805 967 9 0 8 chrUextra 28909114 28909232 -95424 + NTS_DM Other Other 1 117 -123 1 805 1620 0 0 0 chrUextra 28909332 28909611 -95045 + (GAGAA)n Simple_repeat Simple_repeat 1 279 0 1 805 1587 6 0 0 chrUextra 28909733 28909913 -94743 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 372 176 0 0 chrUextra 28909914 28910016 -94640 + (AATAG)n Simple_repeat Simple_repeat 1 102 0 1 805 231 9 8 136 chrUextra 28910116 28910241 -94415 + (CAGAGA)n Simple_repeat Simple_repeat 6 114 0 1 805 398 136 57 40 chrUextra 28910232 28910408 -94248 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 1620 3 0 0 chrUextra 28910508 28910790 -93866 + (TCTTG)n Simple_repeat Simple_repeat 1 282 0 1 805 1620 28 0 3 chrUextra 28910903 28911191 -93465 + (AATAG)n Simple_repeat Simple_repeat 1 286 0 1 805 1578 31 0 0 chrUextra 28911295 28911582 -93074 + (GAGAA)n Simple_repeat Simple_repeat 1 287 0 1 805 216 0 0 0 chrUextra 28911682 28911706 -92950 + (TTCTC)n Simple_repeat Simple_repeat 3 26 0 1 805 1536 36 0 0 chrUextra 28911721 28911971 -92685 + (GAGAA)n Simple_repeat Simple_repeat 1 250 0 1 805 1203 84 0 0 chrUextra 28912076 28912361 -92295 + (TTCTC)n Simple_repeat Simple_repeat 1 285 0 1 805 243 0 0 0 chrUextra 28912463 28912490 -92166 + (TCTG)n Simple_repeat Simple_repeat 1 27 0 1 805 1587 15 0 0 chrUextra 28912490 28912753 -91903 + (TCTA)n Simple_repeat Simple_repeat 1 263 0 1 805 2527 3 0 0 chrUextra 28912853 28913143 -91513 + SSU-rRNA_Dme rRNA rRNA 387 676 -1319 1 805 438 19 0 0 chrUextra 28913243 28913295 -91361 - NTS_DM Other Other -188 52 1 1 805 1480 15 19 19 chrUextra 28913295 28913503 -91153 - NTS_DM Other Other 0 240 33 1 805 1488 22 0 0 chrUextra 28913635 28913815 -90841 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 666 84 0 0 chrUextra 28913815 28913921 -90735 + (CTTAT)n Simple_repeat Simple_repeat 1 107 0 1 805 1356 44 0 0 chrUextra 28914413 28914593 -90063 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 392 146 0 10 chrUextra 28914593 28914697 -89959 + GA-rich Low_complexity Low_complexity 1 103 0 1 805 1620 57 0 0 chrUextra 28914798 28915081 -89575 + (TAGA)n Simple_repeat Simple_repeat 1 283 0 1 805 1620 4 0 0 chrUextra 28915184 28915448 -89208 + (GAGAA)n Simple_repeat Simple_repeat 1 264 0 1 805 1562 0 0 6 chrUextra 28915581 28915760 -88896 + (TCTCG)n Simple_repeat Simple_repeat 3 180 0 1 805 864 0 0 0 chrUextra 28915762 28915858 -88798 + (TCTTG)n Simple_repeat Simple_repeat 5 100 0 1 805 1578 10 0 0 chrUextra 28915958 28916245 -88411 + (GAGAA)n Simple_repeat Simple_repeat 1 287 0 1 805 1455 32 0 7 chrUextra 28916347 28916632 -88024 + (CTTAT)n Simple_repeat Simple_repeat 1 282 0 1 805 1559 18 0 3 chrUextra 28916732 28917017 -87639 + (GAGAA)n Simple_repeat Simple_repeat 1 284 0 1 805 855 29 0 0 chrUextra 28917119 28917221 -87435 + (TTGTG)n Simple_repeat Simple_repeat 4 105 0 1 805 1131 52 0 0 chrUextra 28917221 28917376 -87280 + (GAGAA)n Simple_repeat Simple_repeat 2 156 0 1 805 208 0 0 160 chrUextra 28917529 28917710 -86946 + (TTGTG)n Simple_repeat Simple_repeat 4 155 0 1 805 428 0 0 19 chrUextra 28917738 28917791 -86865 + (CACAA)n Simple_repeat Simple_repeat 4 55 0 1 805 581 147 53 6 chrUextra 28917892 28918063 -86593 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 206 167 97 0 chrUextra 28918068 28918140 -86516 + (AGATG)n Simple_repeat Simple_repeat 3 81 0 1 805 1540 0 0 11 chrUextra 28918680 28918862 -85794 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 213 65 0 0 chrUextra 28918863 28918894 -85762 + (TCTCG)n Simple_repeat Simple_repeat 5 35 0 1 805 312 48 0 0 chrUextra 28918906 28918948 -85708 + (GAGAA)n Simple_repeat Simple_repeat 5 46 0 1 805 1620 18 0 0 chrUextra 28919048 28919333 -85323 + (CTTAT)n Simple_repeat Simple_repeat 1 285 0 1 805 1620 0 0 0 chrUextra 28919458 28919717 -84939 + (TTCTC)n Simple_repeat Simple_repeat 1 259 0 1 805 1356 67 0 3 chrUextra 28919817 28920101 -84555 + (GAGAA)n Simple_repeat Simple_repeat 1 283 0 1 805 577 142 59 6 chrUextra 28920202 28920372 -84284 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 264 0 0 135 chrUextra 28920374 28920485 -84171 + (CAGAGA)n Simple_repeat Simple_repeat 6 101 0 1 805 1500 50 0 4 chrUextra 28920585 28920865 -83791 + (CTTAT)n Simple_repeat Simple_repeat 1 278 0 1 805 1620 46 0 3 chrUextra 28920969 28921253 -83403 + (TTCTC)n Simple_repeat Simple_repeat 1 283 0 1 805 1329 13 0 0 chrUextra 28921736 28921891 -82765 + (GAGAA)n Simple_repeat Simple_repeat 2 156 0 1 805 291 174 43 52 chrUextra 28922117 28922232 -82424 + GA-rich Low_complexity Low_complexity 1 114 0 1 805 1007 62 19 6 chrUextra 28922236 28922398 -82258 + (GAGAA)n Simple_repeat Simple_repeat 5 168 0 1 805 1458 0 0 0 chrUextra 28922498 28922660 -81996 + (TCTA)n Simple_repeat Simple_repeat 2 163 0 1 805 583 0 0 54 chrUextra 28922685 28922777 -81879 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 1 805 768 11 0 0 chrUextra 28922879 28922968 -81688 + (TTCTC)n Simple_repeat Simple_repeat 1 89 0 1 805 1147 63 0 11 chrUextra 28922983 28923159 -81497 + (GAGAA)n Simple_repeat Simple_repeat 4 177 0 1 805 630 37 0 0 chrUextra 28923259 28923340 -81316 + (TCTCC)n Simple_repeat Simple_repeat 1 81 0 1 805 1654 0 5 0 chrUextra 28923342 28923539 -81117 - TABOR_LTR LTR Gypsy 0 506 309 1 805 2152 36 0 0 chrUextra 28923639 28923919 -80737 - DOC LINE Jockey -3485 1240 961 1 805 1488 29 0 4 chrUextra 28924020 28924299 -80357 + (TCTA)n Simple_repeat Simple_repeat 1 277 0 1 805 1422 47 0 0 chrUextra 28924399 28924677 -79979 + (ATAAG)n Simple_repeat Simple_repeat 1 278 0 1 805 1374 58 0 0 chrUextra 28924783 28924972 -79684 - ARS406_DM Unknown Unknown -164 189 1 1 805 1142 185 7 7 chrUextra 28924972 28925051 -79605 + SAR_DM Satellite Satellite 456 723 -749 1 805 1092 105 0 0 chrUextra 28925161 28925432 -79224 + (TTCTC)n Simple_repeat Simple_repeat 1 271 0 1 805 183 42 0 0 chrUextra 28925537 28925561 -79095 + (CTCGG)n Simple_repeat Simple_repeat 2 25 0 1 805 1554 20 0 4 chrUextra 28925561 28925815 -78841 + (TCTCG)n Simple_repeat Simple_repeat 1 253 0 1 805 278 196 31 10 chrUextra 28926294 28926392 -78264 + CT-rich Low_complexity Low_complexity 5 104 0 1 805 235 172 54 15 chrUextra 28926413 28926543 -78113 + GA-rich Low_complexity Low_complexity 5 139 0 1 805 1815 56 0 25 chrUextra 28926671 28926948 -77708 - I_DM LINE I -2213 4018 3749 1 805 1146 80 0 0 chrUextra 28927085 28927261 -77395 + (TCTTG)n Simple_repeat Simple_repeat 2 177 0 1 805 619 130 59 6 chrUextra 28927426 28927596 -77060 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 344 0 112 20 chrUextra 28927591 28927689 -76967 + (GA)n Simple_repeat Simple_repeat 2 108 0 1 805 1275 57 0 0 chrUextra 28928180 28928357 -76299 + (TAGA)n Simple_repeat Simple_repeat 1 177 0 1 805 482 118 0 11 chrUextra 28928556 28928650 -76006 + (TTCTC)n Simple_repeat Simple_repeat 1 93 0 1 805 1371 57 0 0 chrUextra 28928653 28928830 -75826 + (TTTTC)n Simple_repeat Simple_repeat 1 177 0 1 805 2072 23 0 8 chrUextra 28929308 28929572 -75084 - Invader2_I LTR Gypsy -1466 3126 2865 1 805 1557 15 0 0 chrUextra 28929687 28929893 -74763 + (GAGAA)n Simple_repeat Simple_repeat 1 206 0 1 805 561 30 0 0 chrUextra 28929893 28929960 -74696 + (GGAGA)n Simple_repeat Simple_repeat 2 68 0 1 805 1103 15 0 8 chrUextra 28930060 28930193 -74463 + R1_DM LINE R1 5225 5356 0 1 805 636 128 9 0 chrUextra 28930226 28930335 -74321 + R1_DM LINE R1 1 110 -5246 1 805 441 0 0 0 chrUextra 28930435 28930484 -74172 + (TCTCC)n Simple_repeat Simple_repeat 4 52 0 1 805 562 19 110 12 chrUextra 28930825 28930988 -73668 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 805 243 174 75 21 chrUextra 28930991 28931085 -73571 + (AGATG)n Simple_repeat Simple_repeat 3 101 0 1 805 1455 28 0 0 chrUextra 28931190 28931370 -73286 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 343 104 39 13 chrUextra 28931380 28931458 -73198 + CT-rich Low_complexity Low_complexity 5 84 0 1 805 529 152 50 8 chrUextra 28931573 28931835 -72821 + GA-rich Low_complexity Low_complexity 1 273 0 1 805 333 0 0 0 chrUextra 28931935 28931972 -72684 + (TTCTC)n Simple_repeat Simple_repeat 2 38 0 1 805 1488 22 0 0 chrUextra 28932011 28932191 -72465 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1620 9 0 0 chrUextra 28932687 28932912 -71744 + (GAGAA)n Simple_repeat Simple_repeat 1 225 0 1 805 405 0 0 0 chrUextra 28932912 28932957 -71699 + (CAGAA)n Simple_repeat Simple_repeat 1 45 0 1 805 435 19 0 0 chrUextra 28933060 28933112 -71544 + (TTCTC)n Simple_repeat Simple_repeat 5 56 0 1 805 237 119 0 0 chrUextra 28933114 28933156 -71500 + (ACTAG)n Simple_repeat Simple_repeat 4 45 0 1 805 1560 11 0 0 chrUextra 28933156 28933334 -71322 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 1 805 1554 20 0 4 chrUextra 28933434 28933687 -70969 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 805 1020 141 0 0 chrUextra 28933808 28933985 -70671 + (CATA)n Simple_repeat Simple_repeat 4 180 0 1 805 276 226 0 0 chrUextra 28933986 28934079 -70577 + (CAGA)n Simple_repeat Simple_repeat 2 94 0 1 805 633 47 0 0 chrUextra 28934182 28934267 -70389 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 1 805 1587 6 0 0 chrUextra 28934268 28934448 -70208 + (CTAG)n Simple_repeat Simple_repeat 1 180 0 1 805 1554 20 0 0 chrUextra 28934559 28934810 -69846 + (TTGTG)n Simple_repeat Simple_repeat 1 251 0 1 805 301 286 11 53 chrUextra 28935012 28935200 -69456 + (CCCA)n Simple_repeat Simple_repeat 1 180 0 1 805 1500 27 0 8 chrUextra 28935309 28935573 -69083 + (TCTA)n Simple_repeat Simple_repeat 1 261 0 1 805 1578 10 0 0 chrUextra 28935677 28935885 -68771 + (GAGAA)n Simple_repeat Simple_repeat 1 208 0 1 805 204 158 0 0 chrUextra 28935896 28935934 -68722 + (CAGAC)n Simple_repeat Simple_repeat 4 41 0 1 805 525 0 80 57 chrUextra 28936048 28936223 -68433 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 805 220 39 0 135 chrUextra 28936225 28936314 -68342 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 1 805 515 28 0 137 chrUextra 28936476 28936681 -67975 + A-rich Low_complexity Low_complexity 2 178 0 1 805 1620 0 0 0 chrUextra 28936787 28937036 -67620 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 1 805 1380 39 0 0 chrUextra 28937158 28937337 -67319 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 1 805 255 169 0 0 chrUextra 28937351 28937422 -67234 + (CATA)n Simple_repeat Simple_repeat 1 71 0 1 805 205 25 47 81 chrUextra 28937532 28937618 -67038 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 1 805 784 106 47 0 chrUextra 28937629 28937799 -66857 + CT-rich Low_complexity Low_complexity 2 179 0 1 805 351 167 0 0 chrUextra 28937900 28937990 -66666 + (TCTA)n Simple_repeat Simple_repeat 3 92 0 1 805 1301 30 0 6 chrUextra 28938002 28938169 -66487 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 1 805 202 265 0 0 chrUextra 28938270 28938319 -66337 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 548 6 116 18 chrUextra 28938714 28938878 -65778 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 805 272 232 0 10 chrUextra 28939048 28939148 -65508 + (TATATG)n Simple_repeat Simple_repeat 6 104 0 1 805 352 254 0 0 chrUextra 28939148 28939274 -65382 + (TTTG)n Simple_repeat Simple_repeat 4 129 0 1 805 1209 78 0 0 chrUextra 28939377 28939646 -65010 + (GAGAA)n Simple_repeat Simple_repeat 1 269 0 1 805 642 47 0 0 chrUextra 28939746 28939832 -64824 + (TTCTC)n Simple_repeat Simple_repeat 5 90 0 1 805 1587 6 0 0 chrUextra 28939835 28940015 -64641 + (CAACT)n Simple_repeat Simple_repeat 1 180 0 1 805 1536 19 0 0 chrUextra 28940115 28940384 -64272 + (GAGAA)n Simple_repeat Simple_repeat 1 269 0 1 805 213 118 59 0 chrUextra 28940484 28940535 -64121 + CT-rich Low_complexity Low_complexity 5 58 0 1 805 1434 33 0 0 chrUextra 28940540 28940720 -63936 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1599 5 0 0 chrUextra 28940906 28941120 -63536 + (TTCTC)n Simple_repeat Simple_repeat 1 214 0 1 805 1620 0 0 0 chrUextra 28941220 28941434 -63222 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 1 805 1620 0 0 0 chrUextra 28941594 28941774 -62882 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 805 1326 40 0 0 chrUextra 28941968 28942141 -62515 + (TTCTC)n Simple_repeat Simple_repeat 1 173 0 1 805 492 32 0 0 chrUextra 28942155 28942217 -62439 + (GAGAA)n Simple_repeat Simple_repeat 5 66 0 1 805 1319 70 0 4 chrUextra 28942328 28942587 -62069 + (GAGAA)n Simple_repeat Simple_repeat 1 257 0 1 805 1620 0 0 0 chrUextra 28942692 28942916 -61740 + (GAGAA)n Simple_repeat Simple_repeat 1 224 0 1 805 1620 0 0 0 chrUextra 28943059 28943303 -61353 + (GAGAA)n Simple_repeat Simple_repeat 1 244 0 1 805 202 163 47 0 chrUextra 28943429 28943472 -61184 + CT-rich Low_complexity Low_complexity 5 49 0 1 805 516 0 81 58 chrUextra 28943476 28943650 -61006 + (TC)n Simple_repeat Simple_repeat 1 178 0 1 805 252 0 0 0 chrUextra 28943662 28943690 -60966 + (GAGAA)n Simple_repeat Simple_repeat 2 29 0 1 805 577 142 59 6 chrUextra 28943794 28943964 -60692 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 192 0 125 0 chrUextra 28943959 28944007 -60649 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 805 183 42 0 0 chrUextra 28944160 28944184 -60472 + (TAGA)n Simple_repeat Simple_repeat 1 24 0 1 805 1446 33 0 0 chrUextra 28944184 28944425 -60231 + (CTAG)n Simple_repeat Simple_repeat 1 241 0 1 805 1173 63 0 4 chrUextra 28944536 28944780 -59876 + (CTTAT)n Simple_repeat Simple_repeat 1 242 0 1 805 1620 0 0 0 chrUextra 28945255 28945479 -59177 + (GAGAA)n Simple_repeat Simple_repeat 1 224 0 1 805 202 265 0 0 chrUextra 28945621 28945670 -58986 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 218 0 0 161 chrUextra 28945987 28946180 -58476 + (CAAGA)n Simple_repeat Simple_repeat 2 163 0 1 805 1326 8 0 31 chrUextra 28946349 28946611 -58045 + (GAGAA)n Simple_repeat Simple_repeat 1 253 0 1 805 1987 57 4 4 chrUextra 28946711 28946974 -57682 - Copia_I LTR Copia -3726 867 605 1 805 2134 38 0 0 chrUextra 28947074 28947336 -57320 - ROO_I LTR Pao -7137 1119 858 1 805 271 68 0 161 chrUextra 28947485 28947696 -56960 + (TCTTG)n Simple_repeat Simple_repeat 2 178 0 1 805 446 144 61 14 chrUextra 28947833 28947981 -56675 + GA-rich Low_complexity Low_complexity 5 159 0 1 805 224 0 125 0 chrUextra 28948000 28948056 -56600 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 805 371 11 0 160 chrUextra 28948158 28948371 -56285 + (CTTTG)n Simple_repeat Simple_repeat 1 179 0 1 805 224 0 0 157 chrUextra 28948308 28948416 -56240 + (ACTTG)n Simple_repeat Simple_repeat 3 93 0 1 805 404 13 68 68 chrUextra 28948554 28948715 -55941 + (TC)n Simple_repeat Simple_repeat 2 162 0 1 805 206 20 122 0 chrUextra 28948715 28948764 -55892 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 1 805 1448 22 0 9 chrUextra 28949253 28949490 -55166 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 805 1587 16 0 0 chrUextra 28949956 28950210 -54446 + (GGAGAA)n Simple_repeat Simple_repeat 1 254 0 1 805 1395 34 0 0 chrUextra 28951027 28951204 -53452 + (CTATG)n Simple_repeat Simple_repeat 3 179 0 1 805 384 111 0 0 chrUextra 28951211 28951283 -53373 + (CTATT)n Simple_repeat Simple_repeat 1 72 0 1 805 1470 32 0 0 chrUextra 28951742 28951995 -52661 + (CAAGT)n Simple_repeat Simple_repeat 1 253 0 1 805 372 0 118 18 chrUextra 28952097 28952207 -52449 + (GA)n Simple_repeat Simple_repeat 2 122 0 1 805 329 0 0 136 chrUextra 28952207 28952347 -52309 + (CAGAGA)n Simple_repeat Simple_repeat 6 126 0 1 805 27 0 0 0 chrUextra 28952467 28952494 -52162 + AT_rich Low_complexity Low_complexity 1 27 0 1 805 2247 16 0 4 chrUextra 28952807 28953063 -51593 - SSU-rRNA_Dme rRNA rRNA -470 1525 1271 1 805 639 150 34 17 chrUextra 28953169 28953345 -51311 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 1620 0 0 0 chrUextra 28953526 28953706 -50950 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 805 399 106 0 0 chrUextra 28953707 28953773 -50883 + (ATCG)n Simple_repeat Simple_repeat 1 66 0 1 805 1349 39 0 6 chrUextra 28953875 28954056 -50600 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 805 549 0 0 0 chrUextra 28954066 28954127 -50529 + (ACATG)n Simple_repeat Simple_repeat 5 65 0 1 805 1488 26 0 4 chrUextra 28954230 28954458 -50198 + (CAAGA)n Simple_repeat Simple_repeat 1 226 0 1 805 1314 56 0 0 chrUextra 28954595 28954775 -49881 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 405 0 0 0 chrUextra 28955641 28955686 -48970 + (TATCG)n Simple_repeat Simple_repeat 1 45 0 1 805 1455 28 0 0 chrUextra 28955699 28955879 -48777 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 805 1215 64 0 0 chrUextra 28955993 28956245 -48411 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 805 1190 22 0 38 chrUextra 28956697 28956882 -47774 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 805 444 62 0 0 chrUextra 28956884 28956948 -47708 + (AGATG)n Simple_repeat Simple_repeat 2 65 0 1 805 1340 56 4 4 chrUextra 28957049 28957297 -47359 + (TTCTC)n Simple_repeat Simple_repeat 1 248 0 1 805 2112 32 0 0 chrUextra 28957749 28957999 -46657 - SSU-rRNA_Dme rRNA rRNA -438 1557 1308 1 805 1515 36 0 0 chrUextra 28958099 28958348 -46308 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 1 805 1404 45 0 0 chrUextra 28958448 28958696 -45960 + (GAGAA)n Simple_repeat Simple_repeat 1 248 0 1 805 1368 0 0 0 chrUextra 28958796 28958948 -45708 + (GAGAA)n Simple_repeat Simple_repeat 2 153 0 1 805 1620 0 0 0 chrUextra 28959144 28959353 -45303 + (GAGAA)n Simple_repeat Simple_repeat 1 209 0 1 805 996 92 0 4 chrUextra 28959492 28959740 -44916 + (TTCTC)n Simple_repeat Simple_repeat 1 246 0 1 805 377 10 128 0 chrUextra 28959840 28959942 -44714 + (TC)n Simple_repeat Simple_repeat 1 115 0 1 805 309 26 0 0 chrUextra 28960188 28960226 -44430 + (TTCTC)n Simple_repeat Simple_repeat 5 42 0 1 805 210 37 0 0 chrUextra 28960228 28960255 -44401 + (ACTAG)n Simple_repeat Simple_repeat 4 30 0 1 805 1472 22 0 6 chrUextra 28960255 28960436 -44220 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1557 17 0 0 chrUextra 28960538 28960718 -43938 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 496 574 11 0 chrUextra 28960747 28960923 -43733 + polypurine Low_complexity Low_complexity 3 180 0 1 805 1620 0 0 0 chrUextra 28960923 28961103 -43553 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1521 17 0 0 chrUextra 28961244 28961424 -43232 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 1 805 342 0 0 0 chrUextra 28961441 28961479 -43177 + (TTCTCC)n Simple_repeat Simple_repeat 6 43 0 1 805 2190 8 0 4 chrUextra 28961579 28961826 -42830 - STALKER4_I LTR Gypsy -802 5728 5483 1 805 1560 9 0 0 chrUextra 28961926 28962145 -42511 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 805 395 0 0 163 chrUextra 28962301 28962516 -42140 + (CTATG)n Simple_repeat Simple_repeat 1 180 0 1 805 561 15 0 0 chrUextra 28962620 28962686 -41970 + (TTCTC)n Simple_repeat Simple_repeat 3 68 0 1 805 1167 50 0 0 chrUextra 28962704 28962863 -41793 + (GAGAA)n Simple_repeat Simple_repeat 1 159 0 1 805 931 0 0 87 chrUextra 28962979 28963175 -41481 + (CAAGA)n Simple_repeat Simple_repeat 1 179 0 1 805 1047 8 0 0 chrUextra 28963335 28963455 -41201 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 1 805 558 0 0 0 chrUextra 28963460 28963522 -41134 + (GAGAA)n Simple_repeat Simple_repeat 5 66 0 1 805 225 163 0 0 chrUextra 28963661 28963710 -40946 + (CAAGT)n Simple_repeat Simple_repeat 2 50 0 1 805 1350 45 0 0 chrUextra 28963718 28963896 -40760 + (CAAGA)n Simple_repeat Simple_repeat 2 179 0 1 805 574 134 67 0 chrUextra 28964346 28964510 -40146 + GA-rich Low_complexity Low_complexity 5 179 0 1 805 1587 21 0 0 chrUextra 28964698 28964932 -39724 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 805 1584 0 0 0 chrUextra 28965032 28965208 -39448 + (CAAGA)n Simple_repeat Simple_repeat 5 180 0 1 805 1620 5 0 0 chrUextra 28965375 28965579 -39077 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 805 1173 145 18 0 chrUextra 28966060 28966287 -38369 + DMSAT6 Satellite Satellite 231 461 -9 1 805 612 0 0 0 chrUextra 28966401 28966469 -38187 + (GAGAA)n Simple_repeat Simple_repeat 2 69 0 1 805 1356 30 0 0 chrUextra 28966473 28966642 -38014 + (ATAAG)n Simple_repeat Simple_repeat 5 173 0 1 100 1620 0 0 0 chrUextra 28966742 28966946 -37710 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 806 1599 6 0 0 chrUextra 28967442 28967622 -37034 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1514 9 0 5 chrUextra 28968781 28968996 -35660 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 1 806 1491 27 0 5 chrUextra 28969127 28969355 -35301 + (GAGAA)n Simple_repeat Simple_repeat 1 226 0 1 806 203 0 0 160 chrUextra 28969458 28969633 -35023 + (CAAGA)n Simple_repeat Simple_repeat 2 148 0 1 806 565 142 59 6 chrUextra 28969793 28969963 -34693 + GA-rich Low_complexity Low_complexity 1 179 0 1 806 1131 74 0 0 chrUextra 28970128 28970360 -34296 + (GAGAA)n Simple_repeat Simple_repeat 1 232 0 1 806 286 610 0 11 chrUextra 28970360 28970506 -34150 + (ATAAG)n Simple_repeat Simple_repeat 2 146 0 1 806 1434 33 0 0 chrUextra 28970506 28970686 -33970 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1375 28 0 11 chrUextra 28970807 28970989 -33667 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 806 449 578 0 6 chrUextra 28970999 28971180 -33476 + polypyrimidine Low_complexity Low_complexity 1 180 0 1 806 1383 46 0 0 chrUextra 28971194 28971369 -33287 + (GAGAA)n Simple_repeat Simple_repeat 1 175 0 1 806 891 123 0 7 chrUextra 28971469 28971616 -33040 - ARS406_DM Unknown Unknown -207 146 1 1 806 828 220 14 27 chrUextra 28971476 28971696 -32960 + SAR_DM Satellite Satellite 507 723 -749 1 806 1347 45 0 0 chrUextra 28972470 28972649 -32007 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 378 57 0 0 chrUextra 28972649 28972702 -31954 + (CGAGA)n Simple_repeat Simple_repeat 1 53 0 1 806 1620 0 0 0 chrUextra 28972807 28972987 -31669 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 1 806 357 24 0 0 chrUextra 28972987 28973029 -31627 + (CACAG)n Simple_repeat Simple_repeat 1 42 0 1 806 283 96 19 19 chrUextra 28973135 28973149 -31507 + (GGAGA)n Simple_repeat Simple_repeat 3 16 0 1 806 1515 28 0 0 chrUextra 28973149 28973329 -31327 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 283 96 19 19 chrUextra 28973329 28973367 -31289 + (GGAGA)n Simple_repeat Simple_repeat 2 40 0 1 806 459 0 0 0 chrUextra 28973467 28973518 -31138 + (GAGAA)n Simple_repeat Simple_repeat 5 55 0 1 806 1368 67 0 0 chrUextra 28973518 28973698 -30958 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1101 124 5 19 chrUextra 28973823 28974029 -30627 - DMSAT6 Satellite Satellite -239 231 29 1 806 1620 0 0 0 chrUextra 28974143 28974323 -30333 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1460 27 0 5 chrUextra 28974465 28974690 -29966 + (TCTA)n Simple_repeat Simple_repeat 1 223 0 1 806 743 25 98 0 chrUextra 28974831 28974994 -29662 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 806 577 142 59 6 chrUextra 28975173 28975343 -29313 + CT-rich Low_complexity Low_complexity 1 179 0 1 806 225 83 0 0 chrUextra 28975777 28975813 -28843 + (CTTAT)n Simple_repeat Simple_repeat 5 40 0 1 806 1131 79 0 0 chrUextra 28975813 28975989 -28667 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 806 1521 14 0 0 chrUextra 28976105 28976324 -28332 + (CTTAT)n Simple_repeat Simple_repeat 1 219 0 1 806 1480 36 0 9 chrUextra 28976433 28976659 -27997 + (TCTA)n Simple_repeat Simple_repeat 1 223 0 1 806 261 0 0 0 chrUextra 28976759 28976788 -27868 + (GAGAA)n Simple_repeat Simple_repeat 4 32 0 1 806 1158 78 0 0 chrUextra 28976788 28976967 -27689 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 806 894 35 0 0 chrUextra 28977198 28977312 -27344 + (TTCTC)n Simple_repeat Simple_repeat 4 117 0 1 806 1599 14 0 0 chrUextra 28977413 28977623 -27033 + (GAGAA)n Simple_repeat Simple_repeat 1 210 0 1 806 1620 0 0 0 chrUextra 28977741 28977921 -26735 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1611 0 0 0 chrUextra 28978061 28978240 -26416 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 541 142 59 6 chrUextra 28978400 28978570 -26086 + GA-rich Low_complexity Low_complexity 1 179 0 1 806 1620 0 0 0 chrUextra 28978707 28978911 -25745 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 806 261 75 0 0 chrUextra 28979030 28979070 -25586 + (CATGT)n Simple_repeat Simple_repeat 1 40 0 1 806 1158 78 0 0 chrUextra 28979070 28979249 -25407 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 806 1488 23 0 0 chrUextra 28979352 28979569 -25087 + (GAGAA)n Simple_repeat Simple_repeat 1 217 0 1 806 1065 16 0 0 chrUextra 28979673 28979796 -24860 + (TTCTC)n Simple_repeat Simple_repeat 4 126 0 1 806 1587 6 0 0 chrUextra 28979997 28980177 -24479 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1224 60 0 5 chrUextra 28980312 28980530 -24126 + (TTCTC)n Simple_repeat Simple_repeat 1 217 0 1 806 1548 32 0 0 chrUextra 28980630 28980847 -23809 + (GAGAA)n Simple_repeat Simple_repeat 1 217 0 1 806 1611 0 0 0 chrUextra 28980947 28981126 -23530 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 1137 61 0 16 chrUextra 28981268 28981451 -23205 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 531 163 54 0 chrUextra 28981581 28981747 -22909 + GA-rich Low_complexity Low_complexity 5 179 0 1 806 1458 28 0 0 chrUextra 28981900 28982113 -22543 + (TTGTG)n Simple_repeat Simple_repeat 1 213 0 1 806 1217 61 0 6 chrUextra 28982222 28982403 -22253 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1470 28 0 0 chrUextra 28982529 28982708 -21948 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 279 0 0 0 chrUextra 28982845 28982876 -21780 + (CGAGA)n Simple_repeat Simple_repeat 5 35 0 1 806 1578 11 0 0 chrUextra 28982877 28983057 -21599 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1566 0 0 0 chrUextra 28983160 28983334 -21322 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 806 1521 15 0 0 chrUextra 28983790 28983994 -20662 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 806 577 142 59 6 chrUextra 28984108 28984278 -20378 + GA-rich Low_complexity Low_complexity 1 179 0 1 806 359 6 0 163 chrUextra 28984424 28984627 -20029 + (AGATG)n Simple_repeat Simple_repeat 2 171 0 1 806 1512 17 0 0 chrUextra 28984735 28984914 -19742 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 1054 130 0 9 chrUextra 28985044 28985257 -19399 + (TATG)n Simple_repeat Simple_repeat 1 210 0 1 806 1587 10 0 0 chrUextra 28985357 28985564 -19092 + (TTTTG)n Simple_repeat Simple_repeat 1 207 0 1 806 1452 38 0 0 chrUextra 28985672 28985883 -18773 + (TTCTC)n Simple_repeat Simple_repeat 1 211 0 1 806 1257 47 0 0 chrUextra 28985983 28986152 -18504 + (TTCTC)n Simple_repeat Simple_repeat 5 173 0 1 806 36 102 0 0 chrUextra 28986365 28986492 -18164 + AT_rich Low_complexity Low_complexity 1 127 0 1 806 1356 44 0 0 chrUextra 28986623 28986803 -17853 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1382 33 0 6 chrUextra 28986921 28987102 -17554 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 806 213 65 0 0 chrUextra 28987102 28987133 -17523 + (GAGAA)n Simple_repeat Simple_repeat 2 32 0 1 806 288 124 234 0 chrUextra 28987235 28987380 -17276 + (CTAGT)n Simple_repeat Simple_repeat 2 180 0 1 806 1473 19 0 0 chrUextra 28987546 28987757 -16899 + (TAGA)n Simple_repeat Simple_repeat 1 211 0 1 806 441 140 66 0 chrUextra 28987857 28987993 -16663 + GA-rich Low_complexity Low_complexity 5 149 0 1 806 1620 0 0 0 chrUextra 28988483 28988663 -15993 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1599 6 0 0 chrUextra 28988799 28988979 -15677 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1432 17 0 11 chrUextra 28989100 28989281 -15375 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 1494 0 0 0 chrUextra 28989409 28989575 -15081 + (GAGAA)n Simple_repeat Simple_repeat 2 167 0 1 806 237 33 0 0 chrUextra 28989582 28989612 -15044 + (AGCTG)n Simple_repeat Simple_repeat 3 32 0 1 806 936 128 0 0 chrUextra 28989726 28989905 -14751 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 933 166 0 0 chrUextra 28990062 28990231 -14425 + (TCTCTG)n Simple_repeat Simple_repeat 1 169 0 1 806 1500 6 0 0 chrUextra 28990340 28990509 -14147 + (GAGAA)n Simple_repeat Simple_repeat 4 172 0 1 806 1566 0 0 0 chrUextra 28990639 28990813 -13843 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 806 722 144 28 17 chrUextra 28990945 28991122 -13534 + CT-rich Low_complexity Low_complexity 1 179 0 1 806 1515 28 0 0 chrUextra 28991265 28991445 -13211 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1611 0 0 0 chrUextra 28991566 28991745 -12911 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 213 0 0 160 chrUextra 28991870 28992057 -12599 + (CAAGA)n Simple_repeat Simple_repeat 2 158 0 1 806 1449 0 0 0 chrUextra 28992165 28992326 -12330 + (GAGAA)n Simple_repeat Simple_repeat 2 162 0 1 806 1557 17 0 0 chrUextra 28992469 28992649 -12007 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1419 16 5 47 chrUextra 28992778 28992970 -11686 - G_DM LINE Jockey -3 4343 4160 1 806 1548 17 0 0 chrUextra 28993070 28993249 -11407 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 551 0 124 12 chrUextra 28993383 28993544 -11112 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 806 1536 22 0 0 chrUextra 28993990 28994170 -10486 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 533 0 126 13 chrUextra 28994273 28994432 -10224 + (GA)n Simple_repeat Simple_repeat 1 177 0 1 806 1350 19 0 0 chrUextra 28994570 28994731 -9925 + (GAGAA)n Simple_repeat Simple_repeat 2 162 0 1 806 521 134 67 0 chrUextra 28994869 28995018 -9638 + GA-rich Low_complexity Low_complexity 5 163 0 1 806 1587 6 0 0 chrUextra 28995182 28995362 -9294 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 806 198 0 0 0 chrUextra 28995468 28995490 -9166 + (CTAGT)n Simple_repeat Simple_repeat 4 25 0 1 806 1491 12 0 0 chrUextra 28995490 28995662 -8994 + (TTCTC)n Simple_repeat Simple_repeat 2 174 0 1 806 1395 0 0 0 chrUextra 28995762 28995917 -8739 + (GAGAA)n Simple_repeat Simple_repeat 2 156 0 1 806 1324 34 0 11 chrUextra 28996059 28996239 -8417 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 806 1512 17 0 0 chrUextra 28996360 28996539 -8117 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 1390 22 0 11 chrUextra 28996652 28996832 -7824 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 806 193 0 0 165 chrUextra 28997248 28997430 -7226 + (TTGTG)n Simple_repeat Simple_repeat 4 155 0 1 806 1566 0 0 0 chrUextra 28997533 28997707 -6949 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 806 1494 17 0 0 chrUextra 28997829 28998006 -6650 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 1 806 1387 6 0 27 chrUextra 28998121 28998306 -6350 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 1 806 1554 11 0 0 chrUextra 28998414 28998594 -6062 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1269 20 0 0 chrUextra 28999023 28999175 -5481 + (TTCTC)n Simple_repeat Simple_repeat 2 153 0 1 806 1182 41 0 17 chrUextra 28999275 28999447 -5209 + (CAAAA)n Simple_repeat Simple_repeat 3 171 0 1 806 542 0 132 6 chrUextra 28999588 28999747 -4909 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 806 954 86 0 0 chrUextra 28999847 28999998 -4658 + (TAGA)n Simple_repeat Simple_repeat 2 152 0 1 806 1422 0 0 0 chrUextra 29000130 29000288 -4368 + (GAGAA)n Simple_repeat Simple_repeat 2 159 0 1 806 568 164 0 11 chrUextra 29000416 29000595 -4061 + (TCTCTG)n Simple_repeat Simple_repeat 4 180 0 1 806 1350 19 0 0 chrUextra 29000695 29000856 -3800 + (GAGAA)n Simple_repeat Simple_repeat 2 162 0 1 806 1173 15 0 0 chrUextra 29000977 29001112 -3544 + (GAGAA)n Simple_repeat Simple_repeat 2 136 0 1 806 1344 7 0 0 chrUextra 29001257 29001410 -3246 + (GAGAA)n Simple_repeat Simple_repeat 2 154 0 1 806 1359 35 0 0 chrUextra 29001537 29001710 -2946 + (GAGAA)n Simple_repeat Simple_repeat 2 174 0 1 806 834 11 0 0 chrUextra 29001814 29001909 -2747 + (GAGAA)n Simple_repeat Simple_repeat 2 96 0 1 806 1320 30 0 0 chrUextra 29002094 29002259 -2397 + (TTCTC)n Simple_repeat Simple_repeat 4 168 0 1 806 1278 37 0 0 chrUextra 29002642 29002806 -1850 + (GAGAA)n Simple_repeat Simple_repeat 1 164 0 1 806 1290 41 0 0 chrUextra 29002913 29003082 -1574 + (GAGAA)n Simple_repeat Simple_repeat 2 170 0 1 806 1326 19 0 0 chrUextra 29003182 29003339 -1317 + (CACAA)n Simple_repeat Simple_repeat 3 159 0 1 806 474 0 92 46 chrUextra 29003450 29003603 -1053 + (GA)n Simple_repeat Simple_repeat 2 161 0 1 806 629 193 0 0 chrUextra 29003714 29003833 -823 + DMRT1B LINE R1 2591 2709 -2474 1 806 377 96 0 0 chrUextra 29003824 29003876 -780 + DMRT1B LINE R1 3671 3722 -1461 1 806 1362 7 0 0 chrUextra 29003976 29004131 -525 + (TTCTC)n Simple_repeat Simple_repeat 5 159 0 1 806 1317 7 0 0 chrUextra 29004237 29004387 -269 + (GAGAA)n Simple_repeat Simple_repeat 5 154 0 1 806 1323 0 0 0 chrUextra 29004497 29004644 -12 + (CAAGA)n Simple_repeat Simple_repeat 5 151 0 1 585 28448 3 0 1 chrU 0 3070 -10045967 + DIVER_I LTR Pao 2576 5643 0 6 585 2062 5 0 0 chrU 3070 3294 -10045743 + DIVER_LTR LTR Pao 1 224 0 6 585 551 0 131 5 chrU 3314 3536 -10045501 + (TA)n Simple_repeat Simple_repeat 1 249 0 6 585 365 349 54 44 chrU 3858 4409 -10044628 + Copia2_I LTR Copia 116 672 -3490 6 585 1111 306 47 32 chrU 5172 5794 -10043243 + Copia2_I LTR Copia 1386 2041 -1935 6 585 301 293 5 5 chrU 5792 5903 -10043134 + FROGGER_I LTR Copia 198 278 -1799 6 585 225 295 43 43 chrU 5991 6108 -10042929 + FROGGER_I LTR Copia 2098 2214 -1948 6 585 4421 289 22 31 chrU 6393 8025 -10041012 + FROGGER_I LTR Copia 420 2037 -40 6 585 478 0 108 0 chrU 8264 8366 -10040671 + (TA)n Simple_repeat Simple_repeat 2 114 0 6 585 1681 50 0 0 chrU 8387 8588 -10040449 + G4_DM LINE Jockey 3315 3515 -341 6 585 264 133 17 0 chrU 8574 8634 -10040403 + G4_DM LINE Jockey 3796 3856 0 6 585 437 14 0 40 chrU 8641 8715 -10040322 - PROTOP DNA P -3865 615 545 6 585 1447 146 78 21 chrU 8726 9176 -10039861 - DNAREP1_DM LINE Penelope -262 332 12 6 585 28 29 0 0 chrU 9580 9615 -10039422 + AT_rich Low_complexity Low_complexity 1 35 0 6 585 1082 121 52 6 chrU 9695 9869 -10039168 + PROTOP_B DNA P 972 1153 0 6 585 1036 107 56 6 chrU 9909 10069 -10038968 + PROTOP_B DNA P 986 1153 0 6 585 362 304 74 32 chrU 10087 10344 -10038693 - Gypsy4_I LTR Gypsy -891 5397 5157 6 585 25 0 0 0 chrU 10645 10670 -10038367 + AT_rich Low_complexity Low_complexity 1 25 0 6 585 3117 42 16 0 chrU 10717 11097 -10037940 - ROOA_LTR LTR Pao 0 386 1 6 585 6702 41 117 25 chrU 11123 12049 -10036988 - ROOA_I LTR Pao -3877 2972 1962 6 585 12401 44 68 32 chrU 12044 13720 -10035317 - ROOA_I LTR Pao -5074 1775 39 6 585 3045 41 16 0 chrU 13718 14081 -10034956 - ROOA_LTR LTR Pao -17 369 1 6 585 575 141 43 0 chrU 14084 14176 -10034861 - TRANSIB2 DNA Transib -516 2328 2233 6 585 1629 47 140 0 chrU 14200 14435 -10034602 - TRANSIB2 DNA Transib 0 2844 2577 6 585 8855 47 43 7 chrU 14436 15571 -10033466 - TRANSIB2 DNA Transib -1422 1422 247 6 585 455 115 115 0 chrU 15559 15655 -10033382 - TRANSIB2 DNA Transib -2737 107 1 6 585 617 342 17 7 chrU 17136 17433 -10031604 + OSVALDO_I LTR Gypsy 502 801 -5852 6 585 663 312 17 61 chrU 17727 18024 -10031013 + Gypsy8_I LTR Gypsy 2159 2442 -1905 6 585 1034 136 39 104 chrU 18992 19222 -10029815 + ACCORD2_LTR LTR Gypsy 1 215 0 6 585 3761 123 245 29 chrU 19222 20015 -10029022 + ACCORD2_I LTR Gypsy 1 964 -6248 6 585 5338 61 64 3 chrU 20033 20741 -10028296 - DMCR1A LINE CR1 -63 4407 3657 6 585 1519 68 73 0 chrU 20727 20933 -10028104 - DMCR1A LINE CR1 -1146 3324 3104 6 585 9242 63 42 5 chrU 20945 22147 -10026890 - DMCR1A LINE CR1 -2029 2441 1196 6 585 3429 318 66 43 chrU 24276 27293 -10021744 - HMSBEAGLE_I LTR Gypsy -1144 5385 2301 6 585 786 329 19 10 chrU 27521 27831 -10021206 - HMSBEAGLE_I LTR Gypsy -4672 1857 1545 6 585 21 0 0 0 chrU 28055 28076 -10020961 + AT_rich Low_complexity Low_complexity 1 21 0 6 585 35 41 0 0 chrU 28229 28278 -10020759 + AT_rich Low_complexity Low_complexity 1 49 0 6 585 3214 60 25 0 chrU 28803 29202 -10019835 - DMCR1A LINE CR1 -3459 1011 603 6 585 1083 82 7 7 chrU 29204 29351 -10019686 - G3_DM LINE Jockey -1467 3138 2992 6 585 22 80 0 0 chrU 30084 30134 -10018903 + AT_rich Low_complexity Low_complexity 1 50 0 6 585 1049 200 64 0 chrU 30251 30501 -10018536 - DNAREP1_DM LINE Penelope -328 266 1 6 585 761 83 0 0 chrU 31099 31195 -10017842 + DNAREP1_DM LINE Penelope 1 96 -498 6 585 1549 120 182 4 chrU 31200 31475 -10017562 + DMCR1A LINE CR1 1793 2116 -2354 6 585 1960 18 305 0 chrU 31499 31774 -10017263 + Gypsy10_LTR LTR Gypsy 1 359 -5 6 585 16941 75 80 47 chrU 31772 34420 -10014617 + Gypsy10_I LTR Gypsy 15 2750 -2528 6 585 3214 32 13 3 chrU 34433 34814 -10014223 - DIVER2_LTR LTR Pao 0 385 1 6 585 5754 309 33 12 chrU 34814 36976 -10012061 + Gypsy4_I LTR Gypsy 2545 4751 -1537 6 585 35 41 0 0 chrU 36986 37035 -10012002 + AT_rich Low_complexity Low_complexity 1 49 0 6 585 1106 181 31 21 chrU 37056 37366 -10011671 + Gypsy4_I LTR Gypsy 4148 4284 -994 6 585 1724 54 12 188 chrU 37371 37712 -10011325 + Gypsy4_I LTR Gypsy 4492 4772 -506 6 585 1210 113 16 0 chrU 37710 37896 -10011141 + Gypsy4_I LTR Gypsy 4992 5180 -98 6 585 555 72 0 98 chrU 38017 38109 -10010928 + Gypsy4_I LTR Gypsy 5196 5278 0 6 585 641 39 0 0 chrU 38109 38186 -10010851 + Gypsy10_LTR LTR Gypsy 1 77 -287 6 585 338 122 20 0 chrU 38335 38384 -10010653 - Gypsy5_I LTR Gypsy -6459 50 1 6 585 1237 174 27 66 chrU 38489 38790 -10010247 - Gypsy5_LTR LTR Gypsy -141 289 1 6 585 5777 35 43 22 chrU 38790 39543 -10009494 + DOC5_DM LINE Jockey 3914 4682 0 6 585 259 244 227 8 chrU 39568 39700 -10009337 + ROO_I LTR Pao 1 161 -8095 6 585 25 51 0 0 chrU 39700 39739 -10009298 + AT_rich Low_complexity Low_complexity 1 39 0 6 585 410 207 64 76 chrU 39744 39901 -10009136 - BS3_DM LINE Jockey -5 1785 1631 6 585 23 33 0 0 chrU 40557 40587 -10008450 + AT_rich Low_complexity Low_complexity 1 30 0 6 585 1284 172 17 53 chrU 40620 40920 -10008117 - Gypsy5_LTR LTR Gypsy -141 289 1 6 585 227 344 24 18 chrU 42406 42572 -10006465 + BLASTOPIA_I LTR Gypsy 2513 2679 -1802 6 585 508 95 0 0 chrU 43441 43515 -10005522 + DMRT1B LINE R1 1233 1306 -3877 6 585 1871 132 3 3 chrU 43502 43791 -10005246 + DMRT1B LINE R1 1760 2048 -3135 6 585 4479 143 122 11 chrU 43978 46675 -10002362 + DMRT1B LINE R1 2030 5105 -78 6 585 37 0 0 0 chrU 46917 46954 -10002083 + AT_rich Low_complexity Low_complexity 1 37 0 6 585 28989 3 0 0 chrU 47132 50298 -9998739 + FW_DM LINE Jockey 1528 4692 0 6 585 23 0 0 0 chrU 50298 50321 -9998716 + AT_rich Low_complexity Low_complexity 1 23 0 6 585 5073 290 92 40 chrU 50970 53600 -9995437 + Gypsy4_I LTR Gypsy 478 3395 -2893 6 585 1841 310 45 13 chrU 53633 54411 -9994626 + Gypsy4_I LTR Gypsy 3694 4496 -1792 6 585 756 308 151 28 chrU 54438 55046 -9993991 + Gypsy4_I LTR Gypsy 4631 5313 -975 6 585 313 341 0 0 chrU 55839 55974 -9993063 - Invader3_I LTR Gypsy -695 4193 4059 6 585 256 281 11 11 chrU 56977 57067 -9991970 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 6 585 281 345 38 35 chrU 57334 57606 -9991431 - NOMAD_I LTR Gypsy -3215 3357 2908 6 585 764 299 155 31 chrU 59453 60061 -9988976 + Gypsy4_I LTR Gypsy 4631 5313 -975 6 585 305 341 0 0 chrU 60854 60989 -9988048 - Invader3_I LTR Gypsy -695 4193 4059 6 585 256 281 11 11 chrU 61992 62082 -9986955 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 6 585 281 345 38 35 chrU 62349 62621 -9986416 - NOMAD_I LTR Gypsy -3215 3357 2908 6 585 308 327 53 29 chrU 65077 65285 -9983752 + Gypsy4_I LTR Gypsy 5363 5575 -713 6 585 352 312 25 25 chrU 65513 65671 -9983366 + Gypsy4_I LTR Gypsy 5939 6096 -192 6 585 828 129 0 28 chrU 66219 66363 -9982674 + DNAREP1_DM LINE Penelope 2 141 -453 6 585 265 104 62 0 chrU 66369 66417 -9982620 + DNAREP1_DM LINE Penelope 544 594 0 6 585 396 85 0 33 chrU 69140 69201 -9979836 - Gypsy6A_LTR LTR Gypsy -17 403 345 6 585 29 0 0 0 chrU 69208 69237 -9979800 + AT_rich Low_complexity Low_complexity 1 29 0 6 585 5570 70 91 3 chrU 69249 70011 -9979026 + BS2 LINE Jockey 6 834 -3887 6 585 748 55 0 0 chrU 70010 70101 -9978936 + BS2 LINE Jockey 1066 1156 -3565 6 585 3664 65 90 0 chrU 70100 70590 -9978447 + BS2 LINE Jockey 1442 1975 -2746 6 585 4609 43 175 0 chrU 70591 71637 -9977400 + BS2 LINE Jockey 2551 3779 -942 6 585 1725 54 40 5 chrU 71624 71848 -9977189 + BS2 LINE Jockey 4014 4245 -476 6 585 988 76 9 7 chrU 71847 71998 -9977039 + BS2 LINE Jockey 4590 4721 0 6 585 446 99 264 0 chrU 73502 73623 -9975414 + DNAREP1_DM LINE Penelope 1 153 -441 6 585 23 0 0 0 chrU 73623 73646 -9975391 + AT_rich Low_complexity Low_complexity 1 23 0 6 585 227 206 64 118 chrU 73719 73829 -9975208 - BARI1 DNA Tc1 -1036 714 611 6 585 403 96 77 65 chrU 73870 73977 -9975060 - DNAREP1_DM LINE Penelope -287 307 98 6 585 262 353 23 23 chrU 74636 74813 -9974224 + Gypsy12_I LTR Gypsy 3000 3176 -2370 6 585 236 328 24 16 chrU 74921 75045 -9973992 + Gypsy12_I LTR Gypsy 4940 5064 -482 6 585 202 231 15 30 chrU 76012 76079 -9972958 + T-rich Low_complexity Low_complexity 1 66 0 6 585 588 173 9 9 chrU 76094 76205 -9972832 - MICROPIA_LTR LTR Gypsy -12 464 354 6 585 354 67 0 0 chrU 76206 76251 -9972786 - MICROPIA_LTR LTR Gypsy -421 55 11 6 585 7667 87 229 58 chrU 76257 78122 -9970915 - MICROPIA_I LTR Gypsy -9 4467 2285 6 585 2241 123 38 0 chrU 78123 78464 -9970573 - MICROPIA_I LTR Gypsy -2307 2169 1816 6 585 6439 87 121 50 chrU 78460 79503 -9969534 - MICROPIA_I LTR Gypsy -3317 1159 43 6 585 402 154 25 13 chrU 79500 79579 -9969458 - MICROPIA_LTR LTR Gypsy -39 437 358 6 585 563 86 12 0 chrU 80613 80694 -9968343 - DNAREP1_DM LINE Penelope -512 82 1 6 585 808 171 86 72 chrU 80691 80981 -9968056 - DM297_I LTR Gypsy -436 5731 5438 6 585 1284 32 6 13 chrU 81273 81432 -9967605 - Copia2_LTR_DM LTR Copia 0 198 41 6 585 35888 19 16 0 chrU 81445 85524 -9963513 - Copia2_I LTR Copia 0 4162 18 6 585 23 0 0 0 chrU 86249 86272 -9962765 + AT_rich Low_complexity Low_complexity 1 23 0 6 585 1400 132 0 0 chrU 86680 86893 -9962144 - DMRT1A LINE R1 -638 4545 4333 6 585 1001 88 168 4 chrU 86903 87177 -9961860 - DMRT1A LINE R1 -1084 4099 3781 6 585 14039 71 5 2 chrU 87377 89282 -9959755 - I_DM LINE I -758 5473 3563 6 585 2447 65 0 3 chrU 89286 89623 -9959414 - I_DM LINE I -3055 3176 2841 6 585 7206 55 84 10 chrU 89613 90667 -9958370 - I_DM LINE I -3780 2451 1320 6 585 405 0 0 0 chrU 90667 90712 -9958325 + (T)n Simple_repeat Simple_repeat 1 45 0 6 585 43491 1 0 0 chrU 90727 95437 -9953600 + DOC LINE Jockey 17 4725 0 6 585 35466 13 11 1 chrU 95453 99436 -9949601 - FW_DM LINE Jockey -21 4671 648 6 585 4651 17 13 0 chrU 99425 99957 -9949080 - FW_DM LINE Jockey -4153 539 1 6 585 1801 67 0 0 chrU 99966 100221 -9948816 - I_DM LINE I -4901 1330 1076 6 585 6230 58 32 4 chrU 100222 101064 -9947973 - I_DM LINE I -5266 965 100 6 585 450 188 0 13 chrU 101124 101223 -9947814 - DM176_I LTR Gypsy -784 5636 5554 6 585 2307 114 122 27 chrU 101226 101668 -9947369 - DNAREP1_DM LINE Penelope -25 569 86 6 585 1013 123 7 0 chrU 101672 101827 -9947210 - DNAREP1_DM LINE Penelope -422 172 17 6 585 9668 60 19 0 chrU 101822 103034 -9946003 + Baggins1 LINE LOA 3656 4890 -563 6 585 8820 39 16 41 chrU 103036 104199 -9944838 + G4_DM LINE Jockey 2724 3856 0 6 585 3666 50 16 0 chrU 104192 104629 -9944408 + Baggins1 LINE LOA 4995 5438 -15 6 585 1010 40 8 0 chrU 104629 104753 -9944284 + PROTOP_B DNA P 1 125 -1028 6 585 1725 68 100 4 chrU 104751 105001 -9944036 + PROTOP_B DNA P 880 1153 0 6 585 288 192 0 0 chrU 105065 105117 -9943920 - DM176_I LTR Gypsy -3518 2902 2851 6 585 1275 164 189 0 chrU 105114 105394 -9943643 - DM176_I LTR Gypsy -3671 2749 2417 6 585 482 172 257 7 chrU 105414 105566 -9943471 - DM176_I LTR Gypsy -4092 2328 2139 6 585 818 137 0 21 chrU 105568 105710 -9943327 - DM176_I LTR Gypsy -4474 1946 1808 6 585 338 298 0 22 chrU 105727 105861 -9943176 - DM176_I LTR Gypsy -4768 1652 1522 6 585 226 240 162 9 chrU 105980 106085 -9942952 + BEL_LTR LTR Pao 133 253 -108 6 585 293 195 113 48 chrU 106101 106225 -9942812 - DM176_I LTR Gypsy -5140 1280 1149 6 585 649 232 165 40 chrU 106210 106434 -9942603 - DM176_I LTR Gypsy -5385 1035 784 6 585 2909 3 0 6 chrU 106498 106821 -9942216 - MAX_LTR LTR Pao 0 321 1 6 585 54556 1 1 1 chrU 106821 114742 -9934295 - MAX_I LTR Pao 0 7914 1 6 585 2847 3 0 6 chrU 114742 115065 -9933972 - MAX_LTR LTR Pao 0 321 1 6 585 21 0 0 0 chrU 115214 115235 -9933802 + AT_rich Low_complexity Low_complexity 1 21 0 6 585 1308 86 97 32 chrU 115473 115690 -9933347 + DNAREP1_DM LINE Penelope 316 546 -48 6 585 1376 13 0 0 chrU 115689 115844 -9933193 + Copia2_LTR_DM LTR Copia 43 197 -1 6 585 27483 18 17 0 chrU 115845 119874 -9929163 + Copia2_I LTR Copia 1 4162 0 6 585 1340 26 0 0 chrU 119887 120043 -9928994 + Copia2_LTR_DM LTR Copia 41 196 -2 6 585 686 139 8 8 chrU 120551 120674 -9928363 - STALKER4_LTR LTR Gypsy -29 373 251 6 585 26 30 0 0 chrU 121272 121305 -9927732 + AT_rich Low_complexity Low_complexity 1 33 0 6 585 918 178 110 60 chrU 122462 122743 -9926294 - Gypsy6_LTR LTR Gypsy -112 295 1 6 585 1133 140 74 13 chrU 122743 122974 -9926063 + STALKER4_LTR LTR Gypsy 129 373 -29 6 585 483 149 82 7 chrU 123153 123254 -9925783 - DNAREP1_DM LINE Penelope -109 485 390 6 585 296 186 0 0 chrU 123362 123421 -9925616 - DNAREP1_DM LINE Penelope -16 578 520 6 585 3537 5 2 2 chrU 123422 123824 -9925213 + STALKER4_LTR LTR Gypsy 1 402 0 6 585 1344 94 19 32 chrU 123855 124282 -9924755 - DNAREP1_DM LINE Penelope -96 498 2 6 585 261 253 40 20 chrU 124858 125007 -9924030 + (TTTA)n Simple_repeat Simple_repeat 3 154 0 6 585 29 0 0 0 chrU 125841 125870 -9923167 + AT_rich Low_complexity Low_complexity 1 29 0 6 585 41 58 0 0 chrU 126281 126350 -9922687 + AT_rich Low_complexity Low_complexity 1 69 0 6 585 1042 274 168 20 chrU 126557 126956 -9922081 + DIVER2_I LTR Pao 547 1004 -3143 6 585 319 304 0 0 chrU 127110 127202 -9921835 + DIVER2_I LTR Pao 2426 2517 -1630 6 585 1350 282 64 0 chrU 127246 127636 -9921401 + DIVER2_I LTR Pao 2769 3183 -964 6 585 367 200 0 0 chrU 127634 127704 -9921333 + DIVER2_I LTR Pao 3383 3452 -695 6 585 263 275 12 0 chrU 128072 128152 -9920885 + ROVER-I_DM LTR Gypsy 2590 2670 -3914 6 585 24 0 0 0 chrU 128163 128187 -9920850 + AT_rich Low_complexity Low_complexity 1 24 0 6 585 359 171 69 61 chrU 128293 128424 -9920613 + DM297_I LTR Gypsy 4296 4427 -1740 6 585 2111 115 140 6 chrU 128431 129051 -9919986 + BS3_DM LINE Jockey 424 1076 -714 6 585 3041 136 97 4 chrU 129087 129626 -9919411 + BS3_DM LINE Jockey 1199 1787 -3 6 73 6322 102 48 53 chrU 129930 131088 -9917949 + PROTOP_B DNA P 1 1153 0 6 586 2243 132 250 45 chrU 131726 132218 -9916819 + DNAREP1_DM LINE Penelope 1 593 -1 6 586 183 42 0 0 chrU 132376 132400 -9916637 + (TAA)n Simple_repeat Simple_repeat 3 26 0 6 586 652 302 33 0 chrU 132715 132897 -9916140 - Gypsy12_I LTR Gypsy -1554 3992 3805 6 586 1640 103 58 0 chrU 133012 133255 -9915782 - DNAREP1_DM LINE Penelope 0 594 338 6 586 367 58 691 0 chrU 133267 133348 -9915689 - DNAREP1_DM LINE Penelope -457 137 1 6 586 582 164 315 19 chrU 133415 133618 -9915419 + PROTOP DNA P 110 372 -4108 6 586 261 187 227 0 chrU 133621 133696 -9915341 + PROTOP DNA P 1493 1584 -2896 6 586 254 62 0 0 chrU 133741 133773 -9915264 + PROTOP_B DNA P 1119 1150 -3 6 586 543 113 0 142 chrU 134938 135051 -9913986 + DNAREP1_DM LINE Penelope 381 477 -117 6 586 25 0 0 0 chrU 135998 136023 -9913014 + AT_rich Low_complexity Low_complexity 1 25 0 6 586 21 89 0 0 chrU 136227 136283 -9912754 + AT_rich Low_complexity Low_complexity 1 56 0 6 586 6673 68 90 11 chrU 136409 138672 -9910365 + IVK_DM LINE I 12 2501 -2901 6 586 355 127 0 0 chrU 138683 138738 -9910299 + IVK_DM LINE I 3174 3228 -2174 6 586 13888 79 15 5 chrU 138755 140634 -9908403 + IVK_DM LINE I 3503 5400 -2 6 586 895 160 86 0 chrU 140631 140806 -9908231 + DNAREP1_DM LINE Penelope 405 594 0 6 586 1207 153 151 15 chrU 140882 141147 -9907890 + DMCR1A LINE CR1 2428 2728 -1742 6 586 1383 28 62 0 chrU 141963 142142 -9906895 - PROTOP DNA P -2012 2468 2279 6 586 8855 26 5 14 chrU 142131 143250 -9905787 - PROTOP DNA P -2984 1496 388 6 586 2444 25 0 0 chrU 143249 143529 -9905508 - PROTOP DNA P -4200 280 1 6 586 879 53 14 0 chrU 143529 143670 -9905367 - IDEFIX_LTR LTR Gypsy -405 189 1 6 586 16577 79 42 4 chrU 143693 146291 -9902746 - IDEFIX_I LTR Gypsy -140 5488 1518 6 586 4121 20 0 58 chrU 146290 146826 -9902211 + G_DM LINE Jockey 3756 4260 -86 6 586 519 134 12 0 chrU 146815 146897 -9902140 - IDEFIX_I LTR Gypsy -4348 1280 1198 6 586 3903 21 2 25 chrU 146900 147431 -9901606 - PROTOP DNA P -3574 906 388 6 586 2444 25 0 0 chrU 147430 147710 -9901327 - PROTOP DNA P -4200 280 1 6 586 879 53 14 0 chrU 147710 147851 -9901186 - IDEFIX_LTR LTR Gypsy -405 189 1 6 586 16612 78 42 4 chrU 147874 150473 -9898564 - IDEFIX_I LTR Gypsy -140 5488 1518 6 586 4114 22 0 58 chrU 150472 151008 -9898029 + G_DM LINE Jockey 3756 4260 -86 6 586 1163 113 152 0 chrU 150997 151201 -9897836 - IDEFIX_I LTR Gypsy -4348 1280 1046 6 586 4133 79 10 0 chrU 151199 151784 -9897253 - IDEFIX_I LTR Gypsy -5037 591 1 6 586 203 245 0 0 chrU 151968 152021 -9897016 + T-rich Low_complexity Low_complexity 1 53 0 6 586 4025 76 26 3 chrU 152236 152817 -9896220 - IDEFIX_LTR LTR Gypsy 0 594 1 6 586 1219 66 454 0 chrU 152839 153081 -9895956 - Invader5_LTR LTR Gypsy 0 352 1 6 586 1025 47 8 0 chrU 153701 153828 -9895209 - Invader5_I LTR Gypsy -3148 186 59 6 586 891 152 95 42 chrU 155015 155256 -9893781 + DNAREP1_DM LINE Penelope 4 257 -337 6 586 1789 103 145 37 chrU 155283 155819 -9893218 + DNAREP1_DM LINE Penelope 1 594 0 6 586 1114 109 88 5 chrU 156777 156971 -9892066 + DNAREP1_DM LINE Penelope 209 418 -176 6 586 324 61 0 58 chrU 156989 157041 -9891996 + DNAREP1_DM LINE Penelope 539 587 -7 6 586 26 0 0 0 chrU 157183 157209 -9891828 + AT_rich Low_complexity Low_complexity 1 26 0 6 586 2060 102 41 28 chrU 157535 157897 -9891140 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 586 19209 215 48 46 chrU 157897 163198 -9885839 + ROVER-I_DM LTR Gypsy 1 5308 -1276 6 586 2735 157 40 9 chrU 163233 163810 -9885227 + ROVER-I_DM LTR Gypsy 5990 6584 0 6 586 1517 151 45 67 chrU 163810 164185 -9884852 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 586 1569 138 47 91 chrU 164191 164575 -9884462 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 586 2727 159 40 9 chrU 164575 165153 -9883884 - ROVER-I_DM LTR Gypsy 0 6584 5989 6 586 7004 179 6 2 chrU 165197 166469 -9882568 - ROVER-I_DM LTR Gypsy -1286 5298 4022 6 586 11468 33 14 3 chrU 166469 167888 -9881149 + M4DM DNA Transib 1 1435 0 6 586 1838 169 19 1 chrU 167888 168234 -9880803 - ROVER-I_DM LTR Gypsy -2558 4026 3401 6 586 2115 198 23 0 chrU 168246 168686 -9880351 - ROVER-I_DM LTR Gypsy -3877 2707 2258 6 586 907 258 50 30 chrU 168694 168994 -9880043 - ROVER-I_DM LTR Gypsy -4503 2081 1776 6 586 2800 244 100 14 chrU 169159 170692 -9878345 + QUASIMODO_I LTR Gypsy 1815 3479 -2581 6 586 519 293 46 40 chrU 170664 171037 -9878000 + QUASIMODO_I LTR Gypsy 4391 4765 -1295 6 586 4854 309 88 18 chrU 171510 174121 -9874916 - Gypsy4_I LTR Gypsy -192 6096 3301 6 586 1095 243 0 0 chrU 174125 174360 -9874677 - Gypsy4_I LTR Gypsy -3311 2977 2743 6 586 3942 297 61 28 chrU 174370 176136 -9872901 - Gypsy4_I LTR Gypsy -3889 2399 576 6 586 1259 239 58 3 chrU 177140 177517 -9871520 + QUASIMODO_I LTR Gypsy 4939 5336 -724 6 586 44 0 0 0 chrU 177520 177564 -9871473 + AT_rich Low_complexity Low_complexity 1 44 0 6 586 684 252 57 55 chrU 177565 178023 -9871014 + QUASIMODO_I LTR Gypsy 5602 6060 0 6 586 271 97 28 139 chrU 178023 178095 -9870942 + QUASIMODO_LTR LTR Gypsy 1 64 -594 6 586 1059 74 0 0 chrU 178095 178230 -9870807 + PROTOP DNA P 1 135 -4345 6 586 747 148 7 0 chrU 178249 178384 -9870653 + QUASIMODO_LTR LTR Gypsy 60 195 -463 6 586 999 309 42 33 chrU 178391 178912 -9870125 + Invader1_I LTR Gypsy 1987 2512 -674 6 586 6406 29 21 6 chrU 178978 179789 -9869248 + PROTOP DNA P 1 823 -3657 6 586 5817 18 0 0 chrU 179784 180463 -9868574 + PROTOP DNA P 3802 4480 0 6 586 583 152 63 92 chrU 180992 181166 -9867871 - Gypsy8_I LTR Gypsy -4118 229 61 6 586 284 266 62 40 chrU 181164 181340 -9867697 - Gypsy8_I LTR Gypsy -4167 180 1 6 586 1422 161 19 78 chrU 181314 181664 -9867373 - Gypsy8_LTR LTR Gypsy 0 304 1 6 586 1248 131 0 0 chrU 182119 182341 -9866696 - S_DM DNA Tc1 -135 1601 1380 6 586 41095 11 3 1 chrU 182350 187036 -9862001 - FW_DM LINE Jockey 0 4692 1 6 586 7104 106 2 4 chrU 187042 188064 -9860973 - S_DM DNA Tc1 -346 1390 371 6 586 1610 64 0 0 chrU 188071 188305 -9860732 + S_DM DNA Tc1 1503 1736 0 6 586 39 0 0 0 chrU 188772 188811 -9860226 + AT_rich Low_complexity Low_complexity 1 39 0 6 586 287 320 26 26 chrU 189615 189769 -9859268 + Gypsy4_I LTR Gypsy 846 999 -5289 6 586 561 342 26 26 chrU 191397 191854 -9857183 + BURDOCK_I LTR Gypsy 2255 2711 -3149 6 586 697 28 37 0 chrU 191855 191962 -9857075 + TLD2 Unknown Unknown 23 133 -85 6 586 405 275 40 16 chrU 191973 192155 -9856882 + Gypsy4_I LTR Gypsy 3232 3424 -2997 6 586 28 0 0 0 chrU 193396 193424 -9855613 + AT_rich Low_complexity Low_complexity 1 28 0 6 586 24 53 0 0 chrU 193769 193807 -9855230 + AT_rich Low_complexity Low_complexity 1 38 0 6 586 27 0 0 0 chrU 194078 194105 -9854932 + AT_rich Low_complexity Low_complexity 1 27 0 6 586 21 0 0 0 chrU 194627 194648 -9854389 + AT_rich Low_complexity Low_complexity 1 21 0 6 586 46 0 0 0 chrU 195239 195285 -9853752 + AT_rich Low_complexity Low_complexity 1 46 0 6 586 4763 258 21 5 chrU 195651 197006 -9852031 + IDEFIX_I LTR Gypsy 1417 2793 -2835 6 586 3721 275 79 26 chrU 197428 199266 -9849771 + IDEFIX_I LTR Gypsy 3050 4907 -1153 6 586 635 26 0 0 chrU 199284 199360 -9849677 - DMCR1A LINE CR1 -459 4011 3936 6 586 576 94 12 0 chrU 199357 199442 -9849595 - DMCR1A LINE CR1 -723 3747 3662 6 586 8594 30 19 0 chrU 199445 200472 -9848565 - DMCR1A LINE CR1 -1294 3176 2131 6 586 1650 269 30 21 chrU 200486 201275 -9847762 + IDEFIX_I LTR Gypsy 5100 5895 -165 6 586 613 306 66 4 chrU 201796 202039 -9846998 + DMRT1B LINE R1 1410 1667 -3516 6 586 1754 189 11 19 chrU 202085 202447 -9846590 + DMRT1A LINE R1 1846 2204 -2979 6 586 3281 73 16 0 chrU 202991 203414 -9845623 + Mariner2_DM DNA Tc1 224 653 -259 6 586 293 51 0 0 chrU 203412 203451 -9845586 + Mariner2_DM DNA Tc1 766 804 -108 6 586 1299 209 196 37 chrU 203581 204148 -9844889 - CIRCE LINE Composite -1495 4861 4205 6 586 482 226 156 11 chrU 204328 204507 -9844530 - CIRCE LINE Composite -2635 3721 3517 6 586 253 176 0 38 chrU 204551 204602 -9844435 - DNAREP1_DM LINE Penelope -415 179 131 6 586 1856 125 100 0 chrU 204602 204922 -9844115 - DNAREP1_DM LINE Penelope 0 594 243 6 586 1522 77 140 0 chrU 204908 205129 -9843908 - BS3_DM LINE Jockey 0 1790 1539 6 586 7708 89 68 4 chrU 205130 206308 -9842729 - BS3_DM LINE Jockey -705 1085 1 6 586 1155 164 17 70 chrU 206300 206671 -9842366 - DNAREP1_DM LINE Penelope -262 332 43 6 586 1530 151 182 18 chrU 206676 207115 -9841922 - DMCR1A LINE CR1 -1399 3071 2561 6 586 472 251 101 11 chrU 207116 207379 -9841658 - DM412 LTR Gypsy -2365 4532 4396 6 586 898 171 33 28 chrU 207431 207642 -9841395 - DNAREP1_DM LINE Penelope -382 212 1 6 586 385 231 121 15 chrU 207946 208078 -9840959 - GTWIN_I LTR Gypsy -2323 4098 3953 6 586 376 290 0 0 chrU 208196 208289 -9840748 - Gypsy_I LTR Gypsy -2666 3841 3749 6 586 770 67 237 0 chrU 208293 208428 -9840609 - PROTOP_B DNA P 0 1153 987 6 586 701 104 39 16 chrU 208463 208590 -9840447 + DM297_LTR LTR Gypsy 282 411 -3 6 586 2608 65 127 16 chrU 208616 209032 -9840005 - PROTOP_B DNA P -567 586 125 6 586 1690 92 4 0 chrU 209082 209311 -9839726 + Mariner2_DM DNA Tc1 424 653 -259 6 586 293 51 0 0 chrU 209309 209348 -9839689 + Mariner2_DM DNA Tc1 766 804 -108 6 586 1299 209 196 37 chrU 209478 210045 -9838992 - CIRCE LINE Composite -1495 4861 4205 6 586 482 226 156 11 chrU 210225 210404 -9838633 - CIRCE LINE Composite -2635 3721 3517 6 586 253 176 0 38 chrU 210448 210499 -9838538 - DNAREP1_DM LINE Penelope -415 179 131 6 586 1174 120 94 0 chrU 210499 210690 -9838347 - DNAREP1_DM LINE Penelope 0 594 386 6 586 2344 293 55 18 chrU 210707 211716 -9837321 + Gypsy2_I LTR Gypsy 1038 2118 -4894 6 586 7839 45 42 24 chrU 211724 212809 -9836228 + PROTOP_A DNA P 1 1105 0 6 586 2344 254 114 7 chrU 212834 213870 -9835167 + Gypsy6_I LTR Gypsy 1879 2926 -4086 6 586 2936 320 51 31 chrU 214533 216923 -9832114 + Gypsy5_I LTR Gypsy 2206 5629 -1861 6 586 949 124 79 58 chrU 218741 218930 -9830107 - DNAREP1_DM LINE Penelope 0 594 402 6 586 365 122 281 0 chrU 219650 219732 -9829305 - DNAREP1_DM LINE Penelope 0 594 490 6 586 541 255 0 7 chrU 219745 219899 -9829138 - DNAREP1_DM LINE Penelope -339 255 103 6 586 26 30 0 0 chrU 220033 220066 -9828971 + AT_rich Low_complexity Low_complexity 1 33 0 6 586 1725 195 168 10 chrU 220117 220630 -9828407 + DNAREP1_DM LINE Penelope 1 594 0 6 586 4493 86 10 31 chrU 220679 221409 -9827628 - I_DM LINE I -4164 2067 1354 6 586 4874 86 8 3 chrU 221426 222141 -9826896 - I_DM LINE I -5413 818 100 6 586 240 292 11 11 chrU 223236 223326 -9825711 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 6 586 227 361 46 20 chrU 223593 223788 -9825249 - NOMAD_I LTR Gypsy -3215 3357 3158 6 586 22 56 0 0 chrU 226643 226679 -9822358 + AT_rich Low_complexity Low_complexity 1 36 0 6 586 5832 91 80 109 chrU 226901 228089 -9820948 + PROTOP_B DNA P 1 1153 0 6 586 29 0 0 0 chrU 228616 228645 -9820392 + AT_rich Low_complexity Low_complexity 1 29 0 6 586 1288 71 11 16 chrU 228645 228832 -9820205 - IDEFIX_LTR LTR Gypsy -219 375 190 6 586 2104 125 34 11 chrU 228832 229181 -9819856 - IDEFIX_I LTR Gypsy -2482 3146 2790 6 586 905 89 231 57 chrU 230044 230256 -9818781 - Gypsy7_LTR LTR Gypsy -2 249 1 6 586 773 41 82 0 chrU 230256 230354 -9818683 - Gypsy7_I LTR Gypsy 0 4984 4879 6 586 11303 51 48 34 chrU 230482 232075 -9816962 - Gypsy7_I LTR Gypsy -105 4879 3265 6 586 9143 52 12 39 chrU 232066 233313 -9815724 - Gypsy7_I LTR Gypsy -2061 2923 1710 6 586 8079 52 40 48 chrU 233337 234521 -9814516 - Gypsy7_I LTR Gypsy -3810 1174 1 6 586 1642 88 0 46 chrU 234521 234784 -9814253 - Gypsy7_LTR LTR Gypsy 0 251 1 6 586 26 50 0 0 chrU 234844 234884 -9814153 + AT_rich Low_complexity Low_complexity 1 40 0 6 586 5944 173 139 1 chrU 237737 238954 -9810083 - IDEFIX_I LTR Gypsy -4243 1385 1 6 586 23 0 0 0 chrU 239196 239219 -9809818 + AT_rich Low_complexity Low_complexity 1 23 0 6 586 1081 144 68 34 chrU 239376 239613 -9809424 - IDEFIX_LTR LTR Gypsy -22 572 328 6 586 3079 46 59 46 chrU 239637 240112 -9808925 - DM176_LTR LTR Gypsy -26 481 1 6 586 25381 3 0 0 chrU 240112 243021 -9806016 - DM176_I LTR Gypsy 0 6420 3512 6 586 27959 9 2 7 chrU 242992 245754 -9803283 - DM176_I LTR Gypsy -3139 3281 527 6 586 208 28 26 53 chrU 245754 245792 -9803245 + (TTA)n Simple_repeat Simple_repeat 3 39 0 6 586 27959 9 2 7 chrU 245792 246328 -9802709 - DM176_I LTR Gypsy -5894 526 1 6 586 3104 49 59 47 chrU 246328 246816 -9802221 - DM176_LTR LTR Gypsy -27 480 1 6 586 483 87 0 0 chrU 246817 246886 -9802151 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 586 439 36 0 0 chrU 246886 246941 -9802096 - DM176_LTR LTR Gypsy -452 55 1 6 586 1062 133 0 0 chrU 246942 247115 -9801922 + (TA)n Simple_repeat Simple_repeat 2 174 0 6 586 849 301 44 46 chrU 247119 247530 -9801507 - Gypsy12_I LTR Gypsy -3369 2177 1768 6 586 240 340 0 0 chrU 247543 247643 -9801394 - Gypsy12_I LTR Gypsy -3871 1675 1576 6 586 581 241 31 6 chrU 247944 248107 -9800930 - Gypsy12_I LTR Gypsy -4050 1496 1330 6 586 474 152 253 7 chrU 248530 248684 -9800353 + DNAREP1_DM LINE Penelope 1 192 -402 6 586 574 137 102 8 chrU 248714 248832 -9800205 + DNAREP1_DM LINE Penelope 133 261 -333 6 586 2092 120 25 9 chrU 248960 249517 -9799520 - DNAREP1_DM LINE Penelope -154 440 1 6 586 395 225 234 34 chrU 250389 250564 -9798473 - DNAREP1_DM LINE Penelope -108 486 277 6 586 261 216 0 0 chrU 250607 250658 -9798379 - DNAREP1_DM LINE Penelope -541 53 3 6 586 21 57 0 0 chrU 251018 251053 -9797984 + AT_rich Low_complexity Low_complexity 1 35 0 6 586 31 58 0 0 chrU 253203 253255 -9795782 + AT_rich Low_complexity Low_complexity 1 52 0 6 586 754 335 59 20 chrU 253549 254058 -9794979 + TV1I LTR Gypsy 417 945 -5018 6 586 852 94 138 61 chrU 254619 254800 -9794237 - Gypsy8_I LTR Gypsy -4152 195 1 6 586 508 33 0 0 chrU 254800 254861 -9794176 - Gypsy8_LTR LTR Gypsy 0 304 244 6 586 1181 170 24 74 chrU 254852 255184 -9793853 + Gypsy5_LTR LTR Gypsy 6 289 -141 6 586 345 96 19 37 chrU 255324 255378 -9793659 + Gypsy5_I LTR Gypsy 1 53 -6456 6 586 4213 177 25 30 chrU 256390 257263 -9791774 + Gypsy5_I LTR Gypsy 88 956 -5553 6 586 27232 160 9 0 chrU 257258 261910 -9787127 + Gypsy5_I LTR Gypsy 1817 6509 0 6 73 1267 184 24 28 chrU 261916 262211 -9786826 + Gypsy5_LTR LTR Gypsy 10 289 -141 6 587 345 96 19 37 chrU 262351 262405 -9786632 + Gypsy5_I LTR Gypsy 1 53 -6456 6 587 4213 177 25 30 chrU 263417 264290 -9784747 + Gypsy5_I LTR Gypsy 88 956 -5553 6 587 21426 162 6 0 chrU 264285 267957 -9781080 + Gypsy5_I LTR Gypsy 1817 5509 -1000 6 587 5014 267 36 30 chrU 267955 269924 -9779113 + QUASIMODO_I LTR Gypsy 1300 3278 -2782 6 587 1752 148 3 17 chrU 269955 270257 -9778780 + S_DM DNA Tc1 282 579 -1157 6 587 3578 113 67 24 chrU 270267 270935 -9778102 + S_DM DNA Tc1 1040 1736 0 6 587 314 197 0 0 chrU 271276 271337 -9777700 - DNAREP1_DM LINE Penelope -100 494 434 6 587 1142 190 122 8 chrU 271948 272207 -9776830 - DNAREP1_DM LINE Penelope -39 555 139 6 587 689 106 212 0 chrU 272207 272339 -9776698 - DNAREP1_DM LINE Penelope 0 594 435 6 587 1357 119 11 15 chrU 275457 275790 -9773247 - DNAREP1_DM LINE Penelope -137 457 1 6 587 24 53 0 0 chrU 276272 276310 -9772727 + AT_rich Low_complexity Low_complexity 1 38 0 6 587 3523 5 7 7 chrU 276310 276724 -9772313 + DM297_LTR LTR Gypsy 1 414 0 6 587 38098 6 0 0 chrU 276724 281011 -9768026 + DM297_I LTR Gypsy 1 4287 -1880 6 587 9092 11 0 0 chrU 280986 282055 -9766982 + DM297_I LTR Gypsy 5099 6167 0 6 587 3605 5 7 7 chrU 282055 282469 -9766568 + DM297_LTR LTR Gypsy 1 414 0 6 587 29 70 0 0 chrU 282944 283001 -9766036 + AT_rich Low_complexity Low_complexity 1 57 0 6 587 22 35 0 0 chrU 283043 283072 -9765965 + AT_rich Low_complexity Low_complexity 1 29 0 6 587 983 149 28 17 chrU 283094 283271 -9765766 - MAX_I LTR Pao -608 7306 7128 6 587 2461 193 144 10 chrU 283269 283865 -9765172 - MAX_I LTR Pao -5657 2257 1582 6 587 1436 204 88 47 chrU 284253 284675 -9764362 - DNAREP1_DM LINE Penelope -39 555 117 6 587 3003 26 23 0 chrU 284686 285031 -9764006 + Gypsy2_LTR LTR Gypsy 1 353 0 6 587 784 50 303 7 chrU 285031 285173 -9763864 + Gypsy2_I LTR Gypsy 1 184 -5951 6 587 13396 136 54 70 chrU 285158 288087 -9760950 + Gypsy2_I LTR Gypsy 56 2937 -3198 6 587 1639 41 0 0 chrU 288204 288398 -9760639 + FW_DM LINE Jockey 71 264 -4428 6 587 30340 19 3 0 chrU 288397 291832 -9757205 + FW_DM LINE Jockey 1246 4692 0 6 587 13445 21 11 30 chrU 291826 293428 -9755609 + Gypsy2_I LTR Gypsy 2928 4499 -1636 6 587 20123 16 11 24 chrU 293428 295795 -9753242 - Gypsy12_LTR LTR Gypsy 0 2336 1 6 587 14170 14 9 11 chrU 295795 297406 -9751631 - Gypsy12_I LTR Gypsy 0 5546 3940 6 587 351 105 0 0 chrU 297422 297479 -9751558 + (TAA)n Simple_repeat Simple_repeat 3 59 0 6 587 1949 96 32 7 chrU 297491 297774 -9751263 + MDG1_LTR LTR Gypsy 123 412 -30 6 587 2776 84 119 24 chrU 297774 298237 -9750800 + MDG1_I LTR Gypsy 1 507 -6089 6 587 32929 14 0 0 chrU 298238 301912 -9747125 + FW_DM LINE Jockey 1 3675 -1017 6 587 4191 8 0 0 chrU 301906 302375 -9746662 + FW_DM LINE Jockey 4224 4692 0 6 587 18846 16 11 25 chrU 302374 304567 -9744470 + Gypsy2_I LTR Gypsy 2928 5090 -1045 6 587 4425 141 41 27 chrU 304546 305485 -9743552 + Gypsy2_I LTR Gypsy 5416 7011 -1 6 587 3193 20 0 0 chrU 305488 305841 -9743196 + Gypsy2_LTR LTR Gypsy 1 353 0 6 587 675 154 3 3 chrU 305841 305980 -9743057 - DNAREP1_DM LINE Penelope -264 330 117 6 587 844 83 0 0 chrU 306010 306119 -9742918 - Baggins1 LINE LOA -51 5402 5294 6 587 1311 216 45 55 chrU 306166 306588 -9742449 - Gypsy_LTR LTR Gypsy -36 446 29 6 587 2578 207 0 0 chrU 306615 307102 -9741935 - Gypsy_I LTR Gypsy -4 6503 6017 6 587 6546 164 27 0 chrU 307110 308179 -9740858 - Gypsy_I LTR Gypsy -806 5701 4604 6 587 5981 148 37 0 chrU 308176 309126 -9739911 - Gypsy_I LTR Gypsy -2130 4377 3393 6 587 2158 200 53 2 chrU 309123 309596 -9739441 - Gypsy_I LTR Gypsy -3518 2989 2371 6 587 5843 192 29 49 chrU 309589 310813 -9738224 - Gypsy_I LTR Gypsy -4374 2133 934 6 587 22 0 0 0 chrU 310821 310843 -9738194 + AT_rich Low_complexity Low_complexity 1 22 0 6 587 16847 64 59 1 chrU 310843 313010 -9736027 - BS LINE Jockey -72 5054 2762 6 587 11480 72 34 3 chrU 313015 314550 -9734487 - BS LINE Jockey -3487 1639 58 6 587 625 249 27 63 chrU 314573 314796 -9734241 - Gypsy_LTR LTR Gypsy -267 215 1 6 587 940 90 0 0 chrU 314819 314993 -9734044 - Baggins1 LINE LOA -1010 4443 4234 6 587 10643 43 25 0 chrU 314997 316285 -9732752 - Baggins1 LINE LOA -2134 3319 2000 6 587 12379 58 49 0 chrU 318939 320514 -9728523 - Baggins1 LINE LOA -3447 2006 355 6 587 1229 54 0 0 chrU 320510 320657 -9728380 - Baggins1 LINE LOA -1073 4380 4234 6 587 10648 43 25 0 chrU 320661 321949 -9727088 - Baggins1 LINE LOA -2134 3319 2000 6 587 5809 51 51 0 chrU 324444 325170 -9723867 - Baggins1 LINE LOA -3822 1631 869 6 587 284 122 24 24 chrU 325739 325823 -9723214 + A-rich Low_complexity Low_complexity 1 84 0 6 587 2698 57 6 0 chrU 326126 326458 -9722579 - DMRT1A LINE R1 -13 5170 4837 6 587 10988 31 58 4 chrU 326457 327832 -9721205 + Transib5 DNA Transib 962 2410 -591 6 587 769 68 19 0 chrU 327835 327938 -9721099 - DMCR1A LINE CR1 -2 4468 4364 6 587 4536 43 70 5 chrU 327925 328507 -9720530 - DMCR1A LINE CR1 -2769 1701 1082 6 587 538 311 8 2 chrU 329011 329198 -9719839 - Gypsy5_I LTR Gypsy -3597 2912 2671 6 587 412 339 74 18 chrU 329191 329527 -9719510 - ACCORD_I LTR Gypsy -3117 3171 2817 6 587 242 227 38 51 chrU 329922 330001 -9719036 - Gypsy12_I LTR Gypsy -855 4691 4614 6 587 24 32 0 0 chrU 330460 330491 -9718546 + AT_rich Low_complexity Low_complexity 1 31 0 6 587 637 67 11 22 chrU 330591 330683 -9718354 - BS3_DM LINE Jockey 0 1790 1700 6 587 261 103 14 29 chrU 331163 331233 -9717804 + (TAAAAA)n Simple_repeat Simple_repeat 4 72 0 6 587 2735 51 9 0 chrU 331536 331868 -9717169 - DMRT1A LINE R1 -12 5171 4837 6 587 10988 31 58 4 chrU 331867 333242 -9715795 + Transib5 DNA Transib 962 2410 -591 6 587 758 68 19 0 chrU 333245 333348 -9715689 - DMCR1A LINE CR1 -2 4468 4364 6 587 4556 41 70 5 chrU 333335 333917 -9715120 - DMCR1A LINE CR1 -2769 1701 1082 6 587 549 311 8 2 chrU 334421 334608 -9714429 - Gypsy5_I LTR Gypsy -3597 2912 2671 6 587 445 339 74 18 chrU 334601 334937 -9714100 - ACCORD_I LTR Gypsy -3117 3171 2817 6 587 1878 42 4 28 chrU 335746 335993 -9713044 - BATUMI_LTR LTR Pao 0 272 32 6 587 5025 62 0 5 chrU 336015 336679 -9712358 - BATUMI_I LTR Pao 0 7963 7303 6 587 4537 44 7 10 chrU 336702 337279 -9711758 + BATUMI_I LTR Pao 6427 7001 -962 6 587 6423 33 7 7 chrU 337305 338060 -9710977 - BATUMI_I LTR Pao -1543 6420 5666 6 587 467 52 0 0 chrU 338061 338119 -9710918 - DMCR1A LINE CR1 -3331 1139 1082 6 587 549 313 8 2 chrU 338618 338811 -9710226 - Gypsy5_I LTR Gypsy -3307 3113 2747 6 587 445 330 56 14 chrU 338804 339167 -9709870 - ACCORD_I LTR Gypsy -3117 3171 2817 6 587 1878 42 4 28 chrU 339949 340196 -9708841 - BATUMI_LTR LTR Pao 0 272 32 6 587 17810 149 11 18 chrU 340279 343943 -9705094 - BATUMI_I LTR Pao -78 7836 4224 6 587 5147 0 0 0 chrU 343962 344520 -9704517 + ACCORD_LTR LTR Gypsy 1 558 0 6 587 8777 5 1 6 chrU 344520 345519 -9703518 + ACCORD_I LTR Gypsy 1 994 -5294 6 587 39882 2 0 0 chrU 345499 349889 -9699148 + ACCORD_I LTR Gypsy 1899 6288 0 6 587 5147 0 0 0 chrU 349889 350447 -9698590 + ACCORD_LTR LTR Gypsy 1 558 0 6 587 31392 44 19 44 chrU 350447 354702 -9694335 - BATUMI_I LTR Pao -3816 4147 1 6 587 1878 42 4 28 chrU 354702 354949 -9694088 - BATUMI_LTR LTR Pao 0 272 32 6 587 24 32 0 0 chrU 355086 355117 -9693920 + AT_rich Low_complexity Low_complexity 1 31 0 6 587 23 0 0 0 chrU 355197 355220 -9693817 + AT_rich Low_complexity Low_complexity 1 23 0 6 587 600 100 11 0 chrU 355220 355310 -9693727 - BS3_DM LINE Jockey 0 1790 1700 6 587 12028 28 10 14 chrU 355449 356909 -9692128 + Transib5 DNA Transib 956 2410 -591 6 587 837 79 18 0 chrU 356912 357026 -9692011 - DMCR1A LINE CR1 -2 4468 4353 6 587 4287 58 45 5 chrU 357028 357586 -9691451 - DMCR1A LINE CR1 -236 4234 3655 6 587 1528 94 248 4 chrU 357579 357821 -9691216 - DMCR1A LINE CR1 -950 3520 3220 6 587 328 104 0 0 chrU 357832 357880 -9691157 - DMCR1A LINE CR1 -2598 1872 1825 6 587 4787 31 22 0 chrU 357868 358422 -9690615 - DMCR1A LINE CR1 -3478 992 427 6 587 3613 74 23 0 chrU 358415 358888 -9690149 - DMRT1A LINE R1 -9 5174 4691 6 587 8917 53 25 5 chrU 358891 360013 -9689024 - DMRT1A LINE R1 -1082 4101 2957 6 587 13604 42 24 3 chrU 360011 362648 -9686389 - DMRT1A LINE R1 -2492 2691 1 6 587 189 0 0 0 chrU 362720 362741 -9686296 + (A)n Simple_repeat Simple_repeat 1 21 0 6 587 197 102 33 33 chrU 362894 362955 -9686082 + (TAAA)n Simple_repeat Simple_repeat 3 63 0 6 587 443 335 0 0 chrU 363537 363713 -9685324 + Gypsy5_I LTR Gypsy 494 669 -5840 6 587 2548 298 65 44 chrU 363723 365475 -9683562 + ZAM_I LTR Gypsy 4081 5869 -1621 6 587 4228 33 21 2 chrU 365865 366383 -9682654 - DMCR1A LINE CR1 -3914 556 29 6 587 2291 48 176 0 chrU 366395 366708 -9682329 - BS3_DM LINE Jockey -220 1570 1203 6 587 1658 50 20 0 chrU 366707 366909 -9682128 - BS3_DM LINE Jockey -465 1325 1120 6 587 258 263 0 0 chrU 367994 368051 -9680986 - Gypsy12_I LTR Gypsy -4133 1413 1357 6 587 23 0 0 0 chrU 368354 368377 -9680660 + AT_rich Low_complexity Low_complexity 1 23 0 6 587 873 321 78 40 chrU 369962 371001 -9678036 - Gypsy5_I LTR Gypsy -1485 5024 3946 6 587 549 311 8 2 chrU 371400 371587 -9677450 - Gypsy5_I LTR Gypsy -3597 2912 2671 6 587 445 339 74 18 chrU 371580 371916 -9677121 - ACCORD_I LTR Gypsy -3117 3171 2817 6 587 25 0 0 0 chrU 372774 372799 -9676238 + AT_rich Low_complexity Low_complexity 1 25 0 6 587 24 32 0 0 chrU 372828 372859 -9676178 + AT_rich Low_complexity Low_complexity 1 31 0 6 587 2987 61 90 5 chrU 372981 373425 -9675612 - TRANSIB3 DNA Transib -11 2872 2391 6 587 2426 50 112 8 chrU 373423 374051 -9674986 - TRANSIB3 DNA Transib -1874 1009 317 6 587 839 67 17 8 chrU 374042 374162 -9674875 - TRANSIB3 DNA Transib -2762 121 1 6 587 268 57 0 0 chrU 374202 374237 -9674800 - DNAREP1_DM LINE Penelope -473 121 87 6 587 49 32 0 0 chrU 375556 375619 -9673418 + AT_rich Low_complexity Low_complexity 1 63 0 6 587 2203 167 94 36 chrU 377159 377661 -9671376 + DNAREP1_DM LINE Penelope 2 532 -62 6 587 4566 34 0 0 chrU 377655 378186 -9670851 - DMCR1A LINE CR1 0 4470 3940 6 587 1050 53 30 0 chrU 378184 378316 -9670721 - DMCR1A LINE CR1 -748 3722 3587 6 587 11148 30 34 0 chrU 378323 380119 -9668918 - DMCR1A LINE CR1 -991 3479 1623 6 587 12955 41 38 2 chrU 380708 382279 -9666758 - DMCR1A LINE CR1 -2844 1626 1 6 587 460 212 0 0 chrU 382427 382526 -9666511 + IDEFIX_LTR LTR Gypsy 402 500 -94 6 587 612 97 21 0 chrU 382539 382632 -9666405 - DNAREP1_DM LINE Penelope 0 594 500 6 587 235 252 48 10 chrU 382632 382643 -9666394 + P_DG DNA P 2755 2862 -26 6 587 735 128 32 0 chrU 382648 382773 -9666264 - DNAREP1_DM LINE Penelope -171 423 295 6 587 1472 100 362 0 chrU 382769 383040 -9665997 + DNAREP1_DM LINE Penelope 203 571 -23 6 587 23 0 0 0 chrU 383706 383729 -9665308 + AT_rich Low_complexity Low_complexity 1 23 0 6 587 4615 102 20 5 chrU 383730 384587 -9664450 - DMCR1A LINE CR1 -1 4469 3559 6 587 5512 76 19 18 chrU 384557 385336 -9663701 - DMCR1A LINE CR1 -3684 786 7 6 587 317 222 0 14 chrU 386722 386795 -9662242 - ACCORD_I LTR Gypsy -2597 3691 3620 6 587 243 146 0 0 chrU 388245 388300 -9660737 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 6 587 206 148 35 44 chrU 388982 389095 -9659942 + T-rich Low_complexity Low_complexity 1 112 0 6 587 562 130 112 9 chrU 389724 389840 -9659197 - DNAREP1_DM LINE Penelope -262 332 205 6 587 958 137 67 21 chrU 389946 390140 -9658897 - DNAREP1_DM LINE Penelope -266 328 126 6 587 3921 16 0 0 chrU 390134 390572 -9658465 - DMCR1A LINE CR1 0 4470 4033 6 587 1573 162 64 124 chrU 390571 391008 -9658029 - DNAREP1_DM LINE Penelope -11 583 173 6 587 3577 125 85 11 chrU 391605 392252 -9656785 - DMCR1A LINE CR1 -31 4439 3745 6 587 1132 153 56 0 chrU 392253 392469 -9656568 - DMCR1A LINE CR1 -1659 2811 2584 6 587 1633 147 33 20 chrU 392547 392894 -9656143 + DNAREP1_DM LINE Penelope 1 472 -122 6 587 509 211 0 0 chrU 392915 393005 -9656032 - DMRT1B LINE R1 -958 4225 4136 6 73 3736 184 121 1 chrU 392995 393769 -9655268 - DMRT1B LINE R1 -2002 3181 2315 6 588 2014 217 164 8 chrU 393835 394599 -9654438 - DMRT1B LINE R1 -3261 1922 951 6 588 837 198 11 0 chrU 394599 394776 -9654261 - DMRT1B LINE R1 -4633 550 372 6 588 745 125 85 56 chrU 394799 394975 -9654062 - DNAREP1_DM LINE Penelope -4 590 431 6 588 744 187 7 7 chrU 394974 395114 -9653923 + GTWIN_I LTR Gypsy 4610 4749 -1672 6 588 369 204 171 62 chrU 395555 395701 -9653336 - Gypsy8_I LTR Gypsy -4118 229 68 6 588 226 291 39 33 chrU 395733 395886 -9653151 - Gypsy8_I LTR Gypsy -4193 154 1 6 588 598 205 0 43 chrU 395886 396037 -9653000 - Gypsy8_LTR LTR Gypsy -94 210 67 6 588 935 199 65 28 chrU 396081 396298 -9652739 + GTWIN_I LTR Gypsy 5535 5759 -662 6 588 934 200 108 0 chrU 396296 396491 -9652546 + GTWIN_I LTR Gypsy 6022 6237 -184 6 588 874 145 0 0 chrU 396732 396863 -9652174 - DMCR1A LINE CR1 -1329 3141 3011 6 588 627 172 45 0 chrU 396858 396992 -9652045 + DMCR1A LINE CR1 2216 2355 -2115 6 588 242 174 0 0 chrU 397024 397070 -9651967 + DMCR1A LINE CR1 3255 3300 -1170 6 588 238 125 25 0 chrU 397095 397135 -9651902 + DMCR1A LINE CR1 3578 3618 -852 6 588 545 213 44 0 chrU 397152 397288 -9651749 + DMCR1A LINE CR1 3674 3815 -655 6 588 569 226 122 17 chrU 397394 397624 -9651413 - DNAREP1_DM LINE Penelope -143 451 198 6 588 693 150 24 0 chrU 397687 397814 -9651223 - DMCR1A LINE CR1 -3096 1374 1245 6 588 2388 153 69 14 chrU 397816 398239 -9650798 - DMCR1A LINE CR1 -3388 1082 637 6 588 367 146 134 0 chrU 398240 398322 -9650715 - DMCR1A LINE CR1 -4136 334 242 6 588 371 88 206 0 chrU 398380 398448 -9650589 - DMCR1A LINE CR1 -3734 736 655 6 588 583 110 66 0 chrU 399083 399174 -9649863 + DNAREP1_DM LINE Penelope 1 97 -497 6 588 326 192 13 0 chrU 399180 399258 -9649779 + DNAREP1_DM LINE Penelope 257 335 -259 6 588 432 132 79 0 chrU 399290 399366 -9649671 + DNAREP1_DM LINE Penelope 324 405 -189 6 588 28 61 0 0 chrU 400006 400055 -9648982 + AT_rich Low_complexity Low_complexity 1 49 0 6 588 5972 42 0 16 chrU 401175 401916 -9647121 + G4_DM LINE Jockey 3116 3844 -12 6 588 204 170 0 0 chrU 402550 402603 -9646434 + T-rich Low_complexity Low_complexity 1 53 0 6 588 229 209 0 0 chrU 404214 404257 -9644780 - DMRT1C LINE R1 -4398 1045 1003 6 588 401 167 20 50 chrU 404472 404573 -9644464 - DMRT1C LINE R1 -4763 680 583 6 588 210 200 20 0 chrU 405003 405053 -9643984 + T-rich Low_complexity Low_complexity 1 51 0 6 588 21 0 0 0 chrU 406149 406170 -9642867 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 1600 185 61 24 chrU 406353 406729 -9642308 + Gypsy_LTR LTR Gypsy 1 390 -92 6 588 390 170 209 26 chrU 406801 406916 -9642121 + Gypsy_I LTR Gypsy 1 136 -6371 6 588 1120 159 186 0 chrU 406983 407231 -9641806 + Gypsy_I LTR Gypsy 812 1105 -5402 6 588 237 128 0 0 chrU 407635 407674 -9641363 + Gypsy_I LTR Gypsy 1161 1199 -5308 6 588 421 159 123 9 chrU 407680 407794 -9641243 - G6_DM LINE Jockey 0 2042 1916 6 588 1181 260 127 66 chrU 407808 408290 -9640747 - G2_DM LINE Jockey -416 2686 2268 6 588 2112 289 86 4 chrU 408305 409096 -9639941 - G2_DM LINE Jockey -1265 1837 982 6 588 1675 282 46 4 chrU 409101 409648 -9639389 - G_DM LINE Jockey -2383 1963 1394 6 588 2239 204 62 19 chrU 409657 410278 -9638759 - G6_DM LINE Jockey -1041 1001 314 6 588 1353 148 0 0 chrU 410407 410616 -9638421 + Gypsy_I LTR Gypsy 2634 2842 -3665 6 588 6348 32 43 1 chrU 410640 411399 -9637638 - G5A_DM LINE Jockey 0 2841 2051 6 588 5075 79 92 19 chrU 411399 412148 -9636889 - G5A_DM LINE Jockey -1996 845 42 6 588 3336 218 43 7 chrU 412155 412849 -9636188 - G5_DM LINE Jockey -3140 1716 998 6 588 705 312 4 4 chrU 412857 413095 -9635942 - G5_DM LINE Jockey -4156 700 463 6 588 2218 291 127 45 chrU 413381 416462 -9632575 - Invader2_I LTR Gypsy -111 4777 1142 6 588 23 33 0 0 chrU 417253 417283 -9631754 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 595 222 7 15 chrU 417554 417691 -9631346 + Gypsy_I LTR Gypsy 4158 4293 -2214 6 588 1246 174 63 11 chrU 417677 417980 -9631057 + Gypsy_I LTR Gypsy 4530 5112 -1395 6 588 1385 127 139 0 chrU 417973 418218 -9630819 + Gypsy_I LTR Gypsy 5887 6165 -342 6 588 416 239 66 15 chrU 418213 418349 -9630688 + Gypsy_LTR LTR Gypsy 252 394 -88 6 588 26 20 0 58 chrU 418423 418475 -9630562 + AT_rich Low_complexity Low_complexity 1 49 0 6 588 466 97 354 24 chrU 418664 418792 -9630245 + DMCR1A LINE CR1 1 170 -4300 6 588 4369 73 85 4 chrU 418796 419713 -9629324 - BS2 LINE Jockey 0 4721 3731 6 588 2238 312 49 31 chrU 419694 420774 -9628263 + Gypsy4_I LTR Gypsy 683 1781 -4507 6 588 4441 268 76 12 chrU 420772 422187 -9626850 + Gypsy4_I LTR Gypsy 2386 3891 -2397 6 588 1009 183 80 90 chrU 422339 422651 -9626386 - TIRANT_LTR LTR Gypsy -108 309 1 6 588 5560 185 42 17 chrU 422651 424188 -9624849 - TIRANT_I LTR Gypsy 0 7692 6117 6 588 893 213 225 4 chrU 424188 424419 -9624618 - TIRANT_I LTR Gypsy -6017 1675 1394 6 588 618 246 43 55 chrU 424585 424839 -9624198 - TIRANT_I LTR Gypsy -6294 1398 1148 6 588 23 33 0 0 chrU 425611 425641 -9623396 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 595 222 7 15 chrU 425912 426049 -9622988 + Gypsy_I LTR Gypsy 4158 4293 -2214 6 588 1246 174 63 11 chrU 426035 426338 -9622699 + Gypsy_I LTR Gypsy 4530 5112 -1395 6 588 1385 127 139 0 chrU 426331 426576 -9622461 + Gypsy_I LTR Gypsy 5887 6165 -342 6 588 511 232 36 7 chrU 426571 426710 -9622327 + Gypsy_LTR LTR Gypsy 252 394 -88 6 588 26 20 0 58 chrU 426784 426836 -9622201 + AT_rich Low_complexity Low_complexity 1 49 0 6 588 466 97 354 24 chrU 427025 427153 -9621884 + DMCR1A LINE CR1 1 170 -4300 6 588 4339 73 85 5 chrU 427157 428075 -9620962 - BS2 LINE Jockey 0 4721 3731 6 588 2213 311 50 31 chrU 428056 429135 -9619902 + Gypsy4_I LTR Gypsy 683 1781 -4507 6 588 973 253 0 0 chrU 429133 429354 -9619683 + Gypsy4_I LTR Gypsy 2386 2606 -3682 6 588 1116 121 0 0 chrU 442355 442528 -9606509 + (TA)n Simple_repeat Simple_repeat 2 174 0 6 588 3614 5 7 7 chrU 442528 442942 -9606095 - DM297_LTR LTR Gypsy 0 414 1 6 588 12517 7 0 0 chrU 442942 444365 -9604672 - DM297_I LTR Gypsy 0 6167 4745 6 588 6869 8 0 2 chrU 444360 445162 -9603875 - DM297_I LTR Gypsy -5367 800 1 6 588 3523 5 7 7 chrU 445162 445576 -9603461 - DM297_LTR LTR Gypsy 0 414 1 6 588 1158 122 0 0 chrU 445576 445813 -9603224 + (TA)n Simple_repeat Simple_repeat 1 237 0 6 588 932 327 18 3 chrU 445815 446201 -9602836 - Gypsy4_I LTR Gypsy -5223 1065 674 6 588 379 41 0 0 chrU 446513 446562 -9602475 - DOC3_DM LINE Jockey -240 4500 4452 6 588 2127 43 0 0 chrU 446561 446816 -9602221 - DOC3_DM LINE Jockey -488 4252 3998 6 588 10659 40 67 9 chrU 446816 448213 -9600824 - DOC3_DM LINE Jockey -877 3863 2386 6 588 3936 90 73 0 chrU 449656 450231 -9598806 + DMCR1A LINE CR1 1547 2163 -2307 6 588 7268 68 53 3 chrU 450228 451232 -9597805 + DMCR1A LINE CR1 2294 3347 -1123 6 588 201 100 50 0 chrU 451233 451273 -9597764 + (TAG)n Simple_repeat Simple_repeat 3 44 0 6 588 8576 30 33 5 chrU 451413 452488 -9596549 + PROTOP_A DNA P 1 1105 0 6 588 679 320 21 13 chrU 453146 453520 -9595517 - Copia_I LTR Copia -3812 781 405 6 588 192 77 0 0 chrU 453575 453601 -9595436 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 6 588 192 152 0 0 chrU 453789 453822 -9595215 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 6 588 48 43 0 0 chrU 453960 454029 -9595008 + AT_rich Low_complexity Low_complexity 1 69 0 6 588 21 0 0 0 chrU 454657 454678 -9594359 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 15865 40 16 12 chrU 456106 458112 -9590925 - DIVER2_I LTR Pao -1705 2442 431 6 588 2100 71 0 21 chrU 458352 458641 -9590396 - DIVER2_I LTR Pao -3708 439 157 6 588 46 0 0 0 chrU 458654 458700 -9590337 + AT_rich Low_complexity Low_complexity 1 46 0 6 588 27 0 0 0 chrU 460582 460609 -9588428 + AT_rich Low_complexity Low_complexity 1 27 0 6 588 259 159 73 73 chrU 460976 461044 -9587993 - Gypsy4_I LTR Gypsy -1897 4391 4324 6 588 284 279 49 49 chrU 461222 461384 -9587653 - Gypsy4_I LTR Gypsy -2137 4284 4123 6 588 1089 330 62 45 chrU 461886 462519 -9586518 - Gypsy4_I LTR Gypsy -2883 3538 2817 6 588 1471 42 19 5 chrU 462519 462734 -9586303 - TLD2 Unknown Unknown 0 218 1 6 588 1089 330 62 45 chrU 462734 463168 -9585869 - Gypsy4_I LTR Gypsy -2883 2816 2320 6 588 23 33 0 0 chrU 463828 463858 -9585179 + AT_rich Low_complexity Low_complexity 1 30 0 6 588 470 346 32 47 chrU 464500 464896 -9584141 - Gypsy6_I LTR Gypsy -5228 1784 1344 6 588 46 0 0 0 chrU 465892 465938 -9583099 + AT_rich Low_complexity Low_complexity 1 46 0 6 588 281 315 9 10 chrU 466391 466527 -9582510 + HMSBEAGLE_I LTR Gypsy 874 994 -4866 6 588 242 258 20 10 chrU 466779 466877 -9582160 + (TAA)n Simple_repeat Simple_repeat 2 100 0 6 588 21 36 0 0 chrU 467587 467615 -9581422 + AT_rich Low_complexity Low_complexity 1 28 0 6 588 723 343 50 33 chrU 468041 468345 -9580692 + HMSBEAGLE_I LTR Gypsy 3225 3617 -2912 6 588 1222 103 18 18 chrU 468345 468562 -9580475 + TLD2 Unknown Unknown 2 218 0 6 588 723 343 50 33 chrU 468562 469119 -9579918 + HMSBEAGLE_I LTR Gypsy 3618 4341 -2188 6 588 3093 45 8 16 chrU 469123 469511 -9579526 + DIVER2_LTR LTR Pao 1 385 0 6 588 1255 74 0 0 chrU 469511 469674 -9579363 + DIVER2_I LTR Pao 1 163 -3984 6 588 46 0 0 0 chrU 470093 470139 -9578898 + AT_rich Low_complexity Low_complexity 1 46 0 6 588 444 346 41 47 chrU 470985 471531 -9577506 + Gypsy6_I LTR Gypsy 900 1784 -5228 6 588 47 0 0 0 chrU 473622 473669 -9575368 + AT_rich Low_complexity Low_complexity 1 47 0 6 588 27 81 0 0 chrU 474031 474093 -9574944 + AT_rich Low_complexity Low_complexity 1 62 0 6 588 22 0 0 0 chrU 474377 474399 -9574638 + AT_rich Low_complexity Low_complexity 1 22 0 6 588 272 261 50 8 chrU 474675 474795 -9574242 + DNAREP1_DM LINE Penelope 17 141 -453 6 588 232 276 40 0 chrU 474867 474943 -9574094 + DNAREP1_DM LINE Penelope 341 419 -175 6 588 1696 159 31 29 chrU 475446 475916 -9573121 - DNAREP1_DM LINE Penelope -248 346 1 6 588 465 82 0 0 chrU 476425 476486 -9572551 + Baggins1 LINE LOA 3344 3404 -2049 6 588 3421 32 7 0 chrU 476516 476919 -9572118 + Baggins1 LINE LOA 5048 5453 0 6 588 25 31 0 0 chrU 476996 477028 -9572009 + AT_rich Low_complexity Low_complexity 1 32 0 6 588 17930 7 0 0 chrU 477894 479898 -9569139 + DMRT1B LINE R1 2110 4113 -1070 6 588 5234 5 0 0 chrU 479897 480475 -9568562 + DMRT1B LINE R1 4606 5183 0 6 588 409 194 53 53 chrU 480626 480757 -9568280 - Copia_I LTR Copia -58 4535 4405 6 588 22 56 0 0 chrU 480802 480838 -9568199 + AT_rich Low_complexity Low_complexity 1 36 0 6 588 672 286 32 14 chrU 481131 481408 -9567629 - Copia_I LTR Copia -494 4099 3818 6 588 49 43 0 0 chrU 481859 481929 -9567108 + AT_rich Low_complexity Low_complexity 1 70 0 6 588 21 0 0 0 chrU 482557 482578 -9566459 + AT_rich Low_complexity Low_complexity 1 21 0 6 588 511 316 47 40 chrU 484067 484681 -9564356 - Gypsy4_I LTR Gypsy -2895 3393 2949 6 588 579 74 0 50 chrU 484624 484724 -9564313 - TLD2 Unknown Unknown 0 218 124 6 588 19375 17 9 1 chrU 484723 486981 -9562056 - DOC2_DM LINE Jockey 0 4793 2518 6 588 339 251 148 37 chrU 487014 487325 -9561712 - Gypsy4_I LTR Gypsy -3638 2650 2487 6 588 276 274 0 0 chrU 487853 487937 -9561100 - BURDOCK_I LTR Gypsy -4866 994 911 6 588 5874 85 82 5 chrU 487984 488863 -9560174 + DMCR1A LINE CR1 3433 4379 -91 6 588 210 154 0 0 chrU 489535 489574 -9559463 + T-rich Low_complexity Low_complexity 1 39 0 6 588 26 0 0 0 chrU 489586 489612 -9559425 + AT_rich Low_complexity Low_complexity 1 26 0 6 588 24 0 0 0 chrU 489629 489653 -9559384 + AT_rich Low_complexity Low_complexity 1 24 0 6 588 7917 55 21 7 chrU 491349 492371 -9556666 - DMCR1A LINE CR1 0 4470 3434 6 588 2856 39 17 6 chrU 492388 492749 -9556288 - DMCR1A LINE CR1 -1137 3333 2969 6 588 709 21 52 21 chrU 492762 492858 -9556179 + ROOA_I LTR Pao 5162 5260 -1589 6 588 1655 169 39 42 chrU 492882 493265 -9555772 + Gypsy_LTR LTR Gypsy 8 389 -93 6 588 250 85 0 21 chrU 493285 493333 -9555704 + DNAREP1_DM LINE Penelope 219 265 -329 6 588 2765 89 48 9 chrU 493331 493751 -9555286 + BS2 LINE Jockey 28 463 -4258 6 588 4751 83 22 0 chrU 493734 494382 -9554655 + BS2 LINE Jockey 1395 2056 -2665 6 588 688 219 65 8 chrU 494381 494567 -9554470 + Gypsy4_I LTR Gypsy 4579 4752 -1536 6 588 3415 70 56 10 chrU 494652 495224 -9553813 + Gypsy9_I LTR Gypsy 3594 4273 -404 6 588 2025 83 34 17 chrU 495242 495536 -9553501 + Gypsy9_I LTR Gypsy 4379 4677 0 6 588 1682 158 43 21 chrU 495536 495865 -9553172 + Gypsy9_LTR LTR Gypsy 1 336 0 6 588 541 171 167 60 chrU 495867 496035 -9553002 - TIRANT_LTR LTR Gypsy -202 215 30 6 588 2455 54 29 0 chrU 496033 496347 -9552690 + BS2 LINE Jockey 1703 2025 -2696 6 588 755 155 142 51 chrU 496383 496580 -9552457 - TIRANT_LTR LTR Gypsy -202 215 1 6 588 685 87 0 0 chrU 496696 496788 -9552249 - HMSBEAGLE_I LTR Gypsy -6162 367 276 6 588 247 65 0 0 chrU 496787 496818 -9552219 - HMSBEAGLE_I LTR Gypsy -6498 31 1 6 588 896 104 59 15 chrU 496841 496977 -9552060 - DMLTR5 LTR Gypsy -81 185 44 6 588 317 167 0 0 chrU 497015 497069 -9551968 - DMLTR5 LTR Gypsy -212 54 1 6 588 34 0 0 0 chrU 497114 497148 -9551889 + AT_rich Low_complexity Low_complexity 1 34 0 6 588 2051 81 167 0 chrU 497747 498307 -9550730 + TRANSIB2 DNA Transib 12 665 -2179 6 588 523 16 0 0 chrU 498305 498368 -9550669 + TRANSIB2 DNA Transib 829 891 -1953 6 588 10235 74 91 34 chrU 498374 500000 -9549037 + TRANSIB2 DNA Transib 1037 2755 -89 6 588 668 79 0 0 chrU 500000 500089 -9548948 + TRANSIB2 DNA Transib 2756 2844 0 6 588 1254 235 115 87 chrU 500090 500491 -9548546 - NOMAD_I LTR Gypsy -128 6444 6033 6 588 25 31 0 0 chrU 500648 500680 -9548357 + AT_rich Low_complexity Low_complexity 1 32 0 6 588 509 206 512 25 chrU 501025 501307 -9547730 - IDEFIX_LTR LTR Gypsy -42 552 134 6 588 21 36 0 0 chrU 501380 501408 -9547629 + AT_rich Low_complexity Low_complexity 1 28 0 6 588 22 0 0 0 chrU 501430 501452 -9547585 + AT_rich Low_complexity Low_complexity 1 22 0 6 588 680 79 119 0 chrU 501454 501555 -9547482 + STALKER4_LTR LTR Gypsy 233 345 -57 6 588 234 103 0 0 chrU 501592 501621 -9547416 + DM412 LTR Gypsy 303 331 -6566 6 588 24 67 0 0 chrU 501680 501725 -9547312 + AT_rich Low_complexity Low_complexity 1 45 0 6 588 757 209 12 6 chrU 501741 501914 -9547123 + STALKER4_I LTR Gypsy 381 554 -5976 6 588 2811 35 37 3 chrU 501912 502261 -9546776 + DMTOM1_LTR LTR Gypsy 44 404 -6 6 588 24 53 0 0 chrU 502383 502421 -9546616 + AT_rich Low_complexity Low_complexity 1 38 0 6 588 2505 291 99 42 chrU 502546 504043 -9544994 + TOM_I LTR Gypsy 361 1942 -4170 6 588 6300 221 65 3 chrU 504099 505595 -9543442 + TOM_I LTR Gypsy 2341 3929 -2183 6 588 2246 284 67 6 chrU 505636 506343 -9542694 - Gypsy3_I LTR Gypsy -4566 1611 862 6 588 26 64 0 0 chrU 506716 506763 -9542274 + AT_rich Low_complexity Low_complexity 1 47 0 6 588 182 91 0 29 chrU 506903 506937 -9542100 + (TGG)n Simple_repeat Simple_repeat 2 34 0 6 588 1981 78 22 60 chrU 507010 507324 -9541713 - Gypsy6A_LTR LTR Gypsy -118 302 1 6 588 228 37 0 0 chrU 507324 507351 -9541686 + Gypsy11_LTR LTR Gypsy 215 241 -211 6 588 5730 38 44 4 chrU 507366 508135 -9540902 + FB4_DM DNA Tc1 1 800 -3289 6 588 21 36 0 0 chrU 508365 508393 -9540644 + AT_rich Low_complexity Low_complexity 1 28 0 6 588 755 23 0 0 chrU 508393 508481 -9540556 - FB4_DM DNA Tc1 -2976 1113 1026 6 588 1747 24 14 0 chrU 508479 508690 -9540347 - FB4_DM DNA Tc1 -3875 214 1 6 588 1848 122 54 5 chrU 509051 509422 -9539615 + DM412 LTR Gypsy 1166 1554 -1970 6 588 9652 183 41 28 chrU 509408 512625 -9536412 + DM412 LTR Gypsy 1682 5404 -1493 6 588 1679 59 110 0 chrU 513211 513443 -9535594 + DMCR1A LINE CR1 1719 1976 -2494 6 588 404 102 0 0 chrU 513443 513502 -9535535 + Gypsy7_LTR LTR Gypsy 3 61 -190 6 588 240 0 0 0 chrU 513496 513528 -9535509 + Gypsy7_LTR LTR Gypsy 220 251 0 6 588 723 30 0 83 chrU 513528 513636 -9535401 + Gypsy7_I LTR Gypsy 1 99 -4885 6 588 1424 49 21 128 chrU 513681 513915 -9535122 - Invader2_LTR LTR Gypsy -57 209 1 6 588 20334 58 23 36 chrU 513949 516819 -9532218 + Gypsy7_I LTR Gypsy 116 2946 -2038 6 588 984 114 14 0 chrU 516817 516985 -9532052 + Gypsy7_I LTR Gypsy 3162 3300 -1684 6 588 10481 34 36 0 chrU 517007 518270 -9530767 - DMCR1A LINE CR1 -2830 1640 333 6 588 1569 79 120 4 chrU 518247 518488 -9530549 + Gypsy11_LTR LTR Gypsy 184 452 0 6 588 618 278 150 22 chrU 518488 518674 -9530363 + DM176_I LTR Gypsy 5902 6079 -341 6 588 258 56 0 0 chrU 518674 518710 -9530327 + (TTA)n Simple_repeat Simple_repeat 3 38 0 6 588 618 278 150 22 chrU 518710 518983 -9530054 + DM176_I LTR Gypsy 6080 6419 -1 6 588 2645 31 144 3 chrU 518983 519336 -9529701 + DMTOM1_LTR LTR Gypsy 8 410 0 6 588 4846 168 89 24 chrU 519336 520401 -9528636 + STALKER4_I LTR Gypsy 887 2020 -4510 6 588 13105 96 34 6 chrU 520392 522352 -9526685 + STALKER4_I LTR Gypsy 2207 4220 -2310 6 588 1243 70 0 0 chrU 522356 522514 -9526523 + STALKER4_I LTR Gypsy 5456 5613 -917 6 73 7044 194 43 7 chrU 522510 524489 -9524548 - BS2 LINE Jockey -2125 2596 509 6 589 5056 0 0 0 chrU 524606 525164 -9523873 - ACCORD_LTR LTR Gypsy 0 558 1 6 589 8515 4 1 0 chrU 525164 526139 -9522898 - ACCORD_I LTR Gypsy 0 6288 5313 6 589 19418 4 1 0 chrU 526120 528304 -9520733 - ACCORD_I LTR Gypsy -1610 4678 2494 6 589 17364 5 1 4 chrU 528308 530299 -9518738 - ACCORD_I LTR Gypsy -4304 1984 1 6 589 5056 0 0 0 chrU 530299 530857 -9518180 - ACCORD_LTR LTR Gypsy 0 558 1 6 589 882 209 44 77 chrU 531064 531338 -9517699 - BS2 LINE Jockey -4403 318 54 6 589 5496 89 2 3 chrU 531371 532424 -9516613 + BS2 LINE Jockey 245 1363 -3358 6 589 49 0 0 0 chrU 532443 532492 -9516545 + AT_rich Low_complexity Low_complexity 1 49 0 6 589 470 344 41 47 chrU 534576 535122 -9513915 - Gypsy6_I LTR Gypsy -5228 1784 900 6 589 47 0 0 0 chrU 535968 536015 -9513022 + AT_rich Low_complexity Low_complexity 1 47 0 6 589 2792 94 21 7 chrU 536526 536956 -9512081 + MDG1_I LTR Gypsy 1217 1652 -4944 6 589 2474 56 0 0 chrU 537105 537424 -9511613 + MDG1_I LTR Gypsy 2356 2674 -3922 6 589 2105 55 0 4 chrU 537420 537694 -9511343 + MDG1_I LTR Gypsy 3443 3715 -2881 6 589 6079 65 34 6 chrU 537685 538522 -9510515 + MDG1_I LTR Gypsy 3840 4699 -1897 6 589 14977 15 6 1 chrU 538526 540242 -9508795 + FW_DM LINE Jockey 2966 4690 -2 6 589 10427 94 28 8 chrU 540238 541956 -9507081 + MDG1_I LTR Gypsy 4735 6816 -81 6 589 474 125 200 26 chrU 541940 541959 -9507078 + MDG1_LTR LTR Gypsy 67 86 -356 6 589 1470 34 0 0 chrU 541959 542223 -9506814 + (TAA)n Simple_repeat Simple_repeat 1 264 0 6 589 474 125 200 26 chrU 542223 542317 -9506720 + MDG1_LTR LTR Gypsy 87 200 -242 6 589 1082 20 0 0 chrU 542311 542457 -9506580 + FW_DM LINE Jockey 4547 4692 0 6 589 788 62 102 0 chrU 542464 542592 -9506445 + MDG1_I LTR Gypsy 4735 4875 -1721 6 589 1272 7 0 0 chrU 542592 542737 -9506300 + (TAA)n Simple_repeat Simple_repeat 3 147 0 6 589 450 124 185 50 chrU 542737 542831 -9506206 + MDG1_LTR LTR Gypsy 87 201 -241 6 589 1082 20 0 0 chrU 542825 542971 -9506066 + FW_DM LINE Jockey 4547 4692 0 6 589 792 62 101 0 chrU 542976 543105 -9505932 + MDG1_I LTR Gypsy 4735 4876 -1720 6 589 1587 17 0 12 chrU 543105 543351 -9505686 + (TAA)n Simple_repeat Simple_repeat 1 242 0 6 589 1465 145 93 13 chrU 543353 543653 -9505384 + MDG1_LTR LTR Gypsy 89 412 -30 6 589 615 235 13 13 chrU 543654 543809 -9505228 + BS2 LINE Jockey 2721 2875 -1846 6 589 1620 6 0 0 chrU 543929 544305 -9504732 + (TATAA)n Simple_repeat Simple_repeat 1 376 0 6 589 3157 283 48 22 chrU 544307 545806 -9503231 - Gypsy6_I LTR Gypsy -1702 4475 2953 6 589 839 274 0 0 chrU 545807 546011 -9503026 - Gypsy6_I LTR Gypsy -3396 2781 2578 6 589 1576 309 66 42 chrU 546099 546915 -9502122 - Gypsy6_I LTR Gypsy -4893 2119 1284 6 589 26 30 0 0 chrU 547370 547403 -9501634 + AT_rich Low_complexity Low_complexity 1 33 0 6 589 32 57 0 0 chrU 547439 547492 -9501545 + AT_rich Low_complexity Low_complexity 1 53 0 6 589 1924 97 94 30 chrU 547575 547905 -9501132 - Gypsy6A_LTR LTR Gypsy -69 351 1 6 589 600 212 17 111 chrU 547905 548081 -9500956 + HOBO DNA hAT 121 279 -2737 6 589 2585 41 84 0 chrU 548105 548449 -9500588 + PROTOP_B DNA P 1 373 -780 6 589 2276 67 114 2 chrU 548475 548904 -9500133 + PROTOP_B DNA P 539 1015 -138 6 589 21 0 0 0 chrU 548946 548967 -9500070 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 31 0 0 0 chrU 549007 549038 -9499999 + AT_rich Low_complexity Low_complexity 1 31 0 6 589 563 140 75 0 chrU 549038 549145 -9499892 + DNAREP1_DM LINE Penelope 270 384 -210 6 589 1332 191 26 4 chrU 549529 549794 -9499243 + DNAREP1_DM LINE Penelope 184 454 -140 6 589 3019 32 11 0 chrU 549794 550163 -9498874 + PROTOP_B DNA P 1 373 -780 6 589 1277 46 13 31 chrU 550189 550413 -9498624 + PROTOP_B DNA P 539 758 -395 6 589 1736 202 158 46 chrU 550422 551162 -9497875 + Gypsy12_LTR LTR Gypsy 920 1742 -594 6 589 615 122 0 0 chrU 551161 551251 -9497786 + Gypsy12_LTR LTR Gypsy 1940 2029 -307 6 589 17138 29 43 0 chrU 551258 554273 -9494764 - DMCR1A LINE CR1 0 4470 1327 6 589 2180 107 3 15 chrU 554269 554601 -9494436 + Gypsy12A_LTR LTR Gypsy 1953 2280 0 6 589 4350 101 25 33 chrU 554601 555817 -9493220 + Gypsy12_I LTR Gypsy 1 1263 -4283 6 589 10754 103 59 5 chrU 555801 557465 -9491572 + Gypsy12_I LTR Gypsy 1373 3126 -2420 6 589 3077 95 0 0 chrU 557469 557902 -9491135 + Gypsy12_I LTR Gypsy 3280 3712 -1834 6 589 3000 42 6 13 chrU 557902 558309 -9490728 + STALKER4_LTR LTR Gypsy 1 372 -30 6 589 28 48 0 0 chrU 558397 558439 -9490598 + AT_rich Low_complexity Low_complexity 1 42 0 6 589 9406 75 84 17 chrU 558446 560148 -9488889 + STALKER4_I LTR Gypsy 291 2154 -4376 6 589 33343 14 11 2 chrU 560146 564265 -9484772 + STALKER4_I LTR Gypsy 2377 6530 0 6 589 3138 55 1 14 chrU 564265 564704 -9484333 + STALKER4_LTR LTR Gypsy 1 399 -3 6 589 4901 106 75 11 chrU 564704 565834 -9483203 + Gypsy12_I LTR Gypsy 3709 4910 -636 6 589 3729 91 0 6 chrU 565832 566352 -9482685 + Gypsy12_I LTR Gypsy 5026 5542 -4 6 589 2248 219 109 109 chrU 566360 567922 -9481115 + Gypsy12_LTR LTR Gypsy 1 1742 -594 6 589 583 122 0 0 chrU 567921 568011 -9481026 + Gypsy12_LTR LTR Gypsy 1940 2029 -307 6 589 20303 30 22 0 chrU 568019 571052 -9477985 - DMCR1A LINE CR1 0 4470 1327 6 589 2061 107 3 15 chrU 571048 571380 -9477657 + Gypsy12A_LTR LTR Gypsy 1953 2280 0 6 589 7276 97 52 27 chrU 571380 572604 -9476433 + Gypsy12_I LTR Gypsy 1 1254 -4292 6 589 6398 99 2 4 chrU 572600 573520 -9475517 + Gypsy12_I LTR Gypsy 1373 2290 -3256 6 589 14456 44 40 0 chrU 573517 575413 -9473624 + DOC3_DM LINE Jockey 1252 3222 -1518 6 589 1081 21 107 0 chrU 575413 575553 -9473484 + PROTOP_A DNA P 1 155 -950 6 589 1281 57 24 0 chrU 575570 575780 -9473257 + PROTOP DNA P 494 708 -3772 6 589 2606 37 128 2 chrU 575774 576227 -9472810 + PROTOP_A DNA P 596 1105 0 6 589 7054 109 37 9 chrU 576227 577512 -9471525 + DOC3_DM LINE Jockey 3216 4611 -182 6 589 8569 193 54 24 chrU 577511 579669 -9469368 - Gypsy3_I LTR Gypsy -687 6325 3870 6 589 328 157 205 0 chrU 579865 579948 -9469089 + DNAREP1_DM LINE Penelope 1 100 -494 6 589 1879 110 90 12 chrU 579977 580300 -9468737 - Gypsy3_I LTR Gypsy -2601 3576 3229 6 589 560 37 12 0 chrU 580299 580381 -9468656 - TRANSIB1 DNA Transib -2485 529 447 6 589 518 192 0 39 chrU 580381 580484 -9468553 - Gypsy3_I LTR Gypsy -2963 3214 3116 6 589 2421 192 33 12 chrU 580470 580982 -9468055 + Gypsy3_I LTR Gypsy 5085 5607 -570 6 589 9029 39 72 8 chrU 580992 583527 -9465510 - DOC3_DM LINE Jockey -174 4566 1869 6 589 9731 67 55 1 chrU 583527 584976 -9464061 - DOC3_DM LINE Jockey -3185 1608 11 6 589 4251 94 193 0 chrU 584989 585724 -9463313 + STALKER4_I LTR Gypsy 4010 4886 -1644 6 589 6432 102 20 6 chrU 585726 586749 -9462288 + STALKER4_I LTR Gypsy 5084 6121 -409 6 589 597 142 25 124 chrU 586787 587028 -9462009 + STALKER4_I LTR Gypsy 6314 6530 0 6 589 1873 142 39 0 chrU 587028 587387 -9461650 + STALKER4_LTR LTR Gypsy 1 373 -29 6 589 1072 302 29 29 chrU 587441 587966 -9461071 - GTWIN_I LTR Gypsy -5412 1009 485 6 589 22 35 0 0 chrU 588362 588391 -9460646 + AT_rich Low_complexity Low_complexity 1 29 0 6 589 565 197 24 0 chrU 588726 588853 -9460184 + HOBO DNA hAT 1 130 -2886 6 589 1984 102 170 2 chrU 588854 589273 -9459764 + HOBO DNA hAT 636 1124 -1892 6 589 1626 164 40 6 chrU 589296 589645 -9459392 + HOBO DNA hAT 1979 2339 -677 6 589 33 25 0 0 chrU 589701 589741 -9459296 + AT_rich Low_complexity Low_complexity 1 40 0 6 589 47 44 0 0 chrU 590783 590851 -9458186 + AT_rich Low_complexity Low_complexity 1 68 0 6 589 27 62 0 0 chrU 591717 591765 -9457272 + AT_rich Low_complexity Low_complexity 1 48 0 6 589 332 237 17 114 chrU 593325 593501 -9455536 - Gypsy8_LTR LTR Gypsy -25 279 121 6 589 26 30 0 0 chrU 593929 593962 -9455075 + AT_rich Low_complexity Low_complexity 1 33 0 6 589 761 134 14 39 chrU 594695 594913 -9454124 - DNAREP1_DM LINE Penelope -262 332 123 6 589 3244 51 161 20 chrU 596161 596964 -9452073 - DMCR1A LINE CR1 -3550 920 5 6 589 4028 148 109 25 chrU 597593 598480 -9450557 - DMRT1A LINE R1 -989 4194 3164 6 589 3785 117 16 98 chrU 598670 599398 -9449639 - DMRT1A LINE R1 -2731 2452 1784 6 589 882 121 281 0 chrU 599392 599591 -9449446 - DMRT1A LINE R1 -3719 1464 1210 6 589 26 0 0 0 chrU 601302 601328 -9447709 + AT_rich Low_complexity Low_complexity 1 26 0 6 589 1721 323 55 4 chrU 601390 602950 -9446087 - Copia2_I LTR Copia -99 4063 2424 6 589 54 16 0 0 chrU 604456 604517 -9444520 + AT_rich Low_complexity Low_complexity 1 61 0 6 589 21 0 0 0 chrU 604810 604831 -9444206 + AT_rich Low_complexity Low_complexity 1 21 0 6 589 7039 34 20 4 chrU 605293 606624 -9442413 - DOC3_DM LINE Jockey -127 4613 3216 6 589 1161 38 223 0 chrU 606624 606884 -9442153 - PROTOP_A DNA P 0 1105 788 6 589 1621 46 16 0 chrU 606881 607141 -9441896 - PROTOP DNA P -3731 749 494 6 589 1081 21 107 0 chrU 607158 607298 -9441739 - PROTOP_A DNA P -950 155 1 6 589 10546 39 27 0 chrU 607298 608650 -9440387 - DOC3_DM LINE Jockey -1518 3222 1834 6 589 10559 47 66 8 chrU 608648 610121 -9438916 - DOC3_DM LINE Jockey -3182 1558 1 6 589 2779 45 58 17 chrU 610131 610542 -9438495 - TRANSIB4 DNA Transib -1556 1054 627 6 589 350 0 317 0 chrU 610555 610615 -9438422 - TRANSIB4 DNA Transib -2067 543 465 6 589 1790 64 0 0 chrU 610618 610867 -9438170 - TRANSIB4 DNA Transib -2360 250 2 6 589 493 302 39 25 chrU 610963 611245 -9437792 - IDEFIX_I LTR Gypsy -2802 2826 2541 6 589 22 35 0 0 chrU 611304 611333 -9437704 + AT_rich Low_complexity Low_complexity 1 29 0 6 589 181 77 0 71 chrU 611365 611407 -9437630 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 6 589 490 287 106 31 chrU 611644 612036 -9437001 - IDEFIX_I LTR Gypsy -2876 3087 2541 6 589 22 56 0 0 chrU 612036 612072 -9436965 + AT_rich Low_complexity Low_complexity 1 36 0 6 589 1716 326 76 13 chrU 612475 613608 -9435429 - Gypsy4_I LTR Gypsy -192 6096 4893 6 589 316 186 29 0 chrU 613705 613775 -9435262 - GTWIN_I LTR Gypsy -1548 4873 4802 6 589 946 322 31 30 chrU 613784 614412 -9434625 - Gypsy4_I LTR Gypsy -1729 4559 3996 6 589 860 189 77 89 chrU 614413 614726 -9434311 + TIRANT_LTR LTR Gypsy 1 309 -108 6 589 397 176 11 42 chrU 614880 614975 -9434062 + TIRANT_I LTR Gypsy 1 92 -7600 6 589 2560 210 73 57 chrU 615024 616317 -9432720 + TIRANT_I LTR Gypsy 237 1398 -6294 6 589 738 218 230 4 chrU 616483 616713 -9432324 + TIRANT_I LTR Gypsy 1394 1675 -6017 6 589 7513 185 42 17 chrU 616713 618250 -9430787 + TIRANT_I LTR Gypsy 6117 7692 0 6 589 870 187 80 90 chrU 618250 618562 -9430475 + TIRANT_LTR LTR Gypsy 1 309 -108 6 589 1868 289 18 10 chrU 618714 619419 -9429618 - Gypsy4_I LTR Gypsy -2397 3891 3181 6 589 2192 240 67 15 chrU 619415 620133 -9428904 - Gypsy4_I LTR Gypsy -1942 3336 2386 6 589 1563 307 68 37 chrU 620123 621080 -9427957 - Gypsy4_I LTR Gypsy -4507 1781 795 6 589 21 57 0 0 chrU 621585 621620 -9427417 + AT_rich Low_complexity Low_complexity 1 35 0 6 589 2127 117 93 12 chrU 621620 622027 -9427010 + DNAREP1_DM LINE Penelope 1 440 -154 6 589 2627 35 114 3 chrU 622114 622483 -9426554 + DMTOM1_LTR LTR Gypsy 1 410 0 6 589 250 261 58 42 chrU 622746 622866 -9426171 + Invader4_I LTR Gypsy 1 122 -2291 6 589 699 284 92 0 chrU 622921 623258 -9425779 + Invader4_I LTR Gypsy 256 623 -1790 6 589 228 241 87 26 chrU 623279 623394 -9425643 + Invader4_I LTR Gypsy 691 812 -1601 6 589 12290 65 61 5 chrU 623852 627395 -9421642 - I_DM LINE I -767 5464 1722 6 589 6471 70 28 14 chrU 627406 628428 -9420609 - I_DM LINE I -4584 1647 611 6 589 1313 76 0 0 chrU 628454 628652 -9420385 - I_DM LINE I -5934 297 100 6 589 1387 322 60 59 chrU 628748 630160 -9418877 + MICROPIA_I LTR Gypsy 1429 2841 -1635 6 589 1175 302 32 10 chrU 630229 630724 -9418313 + MICROPIA_I LTR Gypsy 3074 3579 -897 6 589 27 0 0 0 chrU 631120 631147 -9417890 + AT_rich Low_complexity Low_complexity 1 27 0 6 589 311 99 324 0 chrU 631342 631412 -9417625 - DNAREP1_DM LINE Penelope -1 593 501 6 589 3605 9 2 0 chrU 631412 631834 -9417203 + Invader1_LTR LTR Gypsy 1 423 0 6 589 11321 128 24 8 chrU 631834 635648 -9413389 + Invader1_I LTR Gypsy 1 3166 -933 6 589 649 259 9 6 chrU 635685 635972 -9413065 - Gypsy2_I LTR Gypsy -1544 4744 4403 6 589 379 244 100 15 chrU 636031 636175 -9412862 - Gypsy2_I LTR Gypsy -3299 2836 2695 6 589 29 28 0 0 chrU 636203 636239 -9412798 + AT_rich Low_complexity Low_complexity 1 36 0 6 589 475 250 9 0 chrU 636277 636393 -9412644 - FW_DM LINE Jockey -3450 1242 1126 6 589 910 338 33 35 chrU 637516 638553 -9410484 - Gypsy4_I LTR Gypsy -465 5823 4847 6 589 665 256 6 2 chrU 638638 638925 -9410112 - Gypsy4_I LTR Gypsy -1544 4744 4403 6 589 944 260 10 7 chrU 638996 639294 -9409743 - Gypsy4_I LTR Gypsy -3335 2953 2655 6 589 10195 34 26 9 chrU 639409 640832 -9408205 + STALKER4_I LTR Gypsy 5084 6530 0 6 589 3145 55 1 14 chrU 640832 641271 -9407766 + STALKER4_LTR LTR Gypsy 1 399 -3 6 589 326 24 0 0 chrU 646920 646962 -9402075 - DM412 LTR Gypsy -1720 5177 5136 6 589 20590 71 12 4 chrU 646960 649889 -9399148 - DM412 LTR Gypsy -2096 4801 1850 6 589 235 352 95 7 chrU 650192 650487 -9398550 - BLASTOPIA_I LTR Gypsy -1 4480 4160 6 589 300 329 12 12 chrU 650798 650964 -9398073 - BLASTOPIA_I LTR Gypsy -775 3706 3541 6 589 338 288 18 24 chrU 651296 651463 -9397574 - MDG3_I LTR Gypsy -1558 3428 3263 6 589 296 321 7 7 chrU 651748 651889 -9397148 - Invader2_I LTR Gypsy -1843 2749 2624 6 589 269 306 62 69 chrU 651901 652319 -9396718 - BLASTOPIA_I LTR Gypsy -1887 2594 2180 6 590 1536 124 74 7 chrU 656613 656898 -9392139 - MAX_LTR LTR Pao 0 321 18 6 590 4860 66 42 0 chrU 656902 657613 -9391424 - DM412 LTR Gypsy -1021 5876 5136 6 590 8100 57 10 2 chrU 657611 658703 -9390334 - DM412 LTR Gypsy -2096 4801 3701 6 590 287 315 26 26 chrU 659029 659218 -9389819 + Copia2_I LTR Copia 140 328 -3834 6 590 11372 97 5 2 chrU 659389 661120 -9387917 - S_DM DNA Tc1 0 1736 1 6 590 258 320 20 20 chrU 661120 661268 -9387769 + Copia2_I LTR Copia 489 636 -3526 6 590 283 326 38 38 chrU 661537 661773 -9387264 + Copia2_I LTR Copia 974 1209 -2953 6 590 40358 3 2 0 chrU 662001 666706 -9382331 + DMRT1B LINE R1 470 5183 0 6 590 1659 333 64 37 chrU 666696 669070 -9379967 + Copia2_I LTR Copia 1407 3902 -260 6 590 13484 92 43 0 chrU 669457 671410 -9377627 - DM412 LTR Gypsy -3192 3705 1669 6 590 24 0 0 0 chrU 671568 671592 -9377445 + AT_rich Low_complexity Low_complexity 1 24 0 6 590 570 107 126 0 chrU 671656 671759 -9377278 - DM412 LTR Gypsy -316 255 140 6 590 1660 48 0 0 chrU 671770 671979 -9377058 - DM412 LTR Gypsy -548 6349 6141 6 590 11628 56 36 1 chrU 671976 673521 -9375516 - DM412 LTR Gypsy -1072 5825 4227 6 590 505 59 0 0 chrU 673530 673598 -9375439 - DM412 LTR Gypsy -2954 3943 3876 6 590 369 324 65 68 chrU 674007 675175 -9373862 + MDG3_I LTR Gypsy 2260 3424 -1562 6 590 339 337 58 23 chrU 675436 675697 -9373340 + BLASTOPIA_I LTR Gypsy 3541 3810 -671 6 590 6154 138 58 31 chrU 676293 677534 -9371503 + DM412 LTR Gypsy 77 1350 -5547 6 590 10649 95 14 4 chrU 677569 679098 -9369939 + DM412 LTR Gypsy 1564 3108 -3789 6 590 5894 75 84 1 chrU 679097 679902 -9369135 + DM412 LTR Gypsy 3216 4051 -2846 6 590 219 36 0 0 chrU 679902 679930 -9369107 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 590 5894 75 84 1 chrU 679930 680001 -9369036 + DM412 LTR Gypsy 4052 4164 -2733 6 590 14650 70 56 13 chrU 679977 682218 -9366819 + DM412 LTR Gypsy 4698 6897 0 6 590 24 0 0 0 chrU 682291 682315 -9366722 + AT_rich Low_complexity Low_complexity 1 24 0 6 590 3112 126 199 12 chrU 682459 683350 -9365687 - IDEFIX_I LTR Gypsy -2415 3213 2157 6 590 1041 103 345 44 chrU 683365 683591 -9365446 - IDEFIX_LTR LTR Gypsy -218 376 83 6 590 8336 153 144 5 chrU 683590 685606 -9363431 - DMRT1B LINE R1 -3 5180 2841 6 590 1184 107 0 0 chrU 685607 685775 -9363262 - DMRT1B LINE R1 -2452 2731 2564 6 590 1806 181 88 32 chrU 685765 686575 -9362462 - DMRT1B LINE R1 -4132 1051 191 6 590 407 153 47 0 chrU 686823 686908 -9362129 - IDEFIX_LTR LTR Gypsy -505 89 1 6 590 227 150 0 0 chrU 686876 686916 -9362121 + BARI1 DNA Tc1 3 42 -1708 6 590 355 197 372 14 chrU 686929 687077 -9361960 + DNAREP1_DM LINE Penelope 271 471 -123 6 590 24 53 0 0 chrU 687200 687238 -9361799 + AT_rich Low_complexity Low_complexity 1 38 0 6 590 478 220 0 113 chrU 687348 687507 -9361530 + DMCR1A LINE CR1 4078 4218 -252 6 590 378 94 0 0 chrU 688613 688677 -9360360 + (TAA)n Simple_repeat Simple_repeat 3 66 0 6 590 781 144 280 13 chrU 688679 688922 -9360115 + MDG1_LTR LTR Gypsy 89 396 -46 6 590 2491 220 79 71 chrU 688932 690065 -9358972 + MDG1_I LTR Gypsy 112 1221 -5375 6 590 719 102 0 0 chrU 690250 690358 -9358679 + MDG1_I LTR Gypsy 1246 1353 -5243 6 590 2640 47 0 0 chrU 690355 690675 -9358362 + MDG1_I LTR Gypsy 3610 3929 -2667 6 590 12133 90 6 2 chrU 690675 692403 -9356634 + S_DM DNA Tc1 1 1736 0 6 590 2640 47 0 0 chrU 692403 692723 -9356314 - MDG1_I LTR Gypsy -2667 3929 3610 6 590 719 102 0 0 chrU 692720 692828 -9356209 - MDG1_I LTR Gypsy -5243 1353 1246 6 590 2491 220 79 71 chrU 693013 694146 -9354891 - MDG1_I LTR Gypsy -5375 1221 112 6 590 781 144 280 13 chrU 694156 694399 -9354638 - MDG1_LTR LTR Gypsy -46 396 89 6 590 378 94 0 0 chrU 694401 694465 -9354572 + (TTA)n Simple_repeat Simple_repeat 3 66 0 6 591 11041 68 38 44 chrU 815790 818249 -9230788 - Invader4_I LTR Gypsy -100 2313 1 6 591 3225 3 0 0 chrU 818249 818595 -9230442 - Invader4_LTR LTR Gypsy 0 346 1 6 591 21 57 0 0 chrU 818672 818707 -9230330 + AT_rich Low_complexity Low_complexity 1 35 0 6 591 50197 44 46 35 chrU 818882 825542 -9223495 + MAX_I LTR Pao 557 7291 -623 6 591 1780 130 25 0 chrU 825537 825813 -9223224 + MAX_LTR LTR Pao 5 287 -34 6 591 3717 59 55 0 chrU 825835 826325 -9222712 + DM412 LTR Gypsy 5884 6400 -497 6 591 2050 129 51 39 chrU 826365 826869 -9222168 + DM412 LTR Gypsy 1 459 -112 6 591 778 53 0 0 chrU 826890 826985 -9222052 - ROOA_I LTR Pao -5232 1617 1523 6 591 10531 60 30 5 chrU 827001 828619 -9220418 + Invader2_I LTR Gypsy 349 2047 -2545 6 591 15094 39 38 10 chrU 828615 830545 -9218492 + Invader2_I LTR Gypsy 2179 4162 -430 6 591 251 125 0 0 chrU 830579 830619 -9218418 + Invader2_LTR LTR Gypsy 227 266 0 6 591 2718 39 6 3 chrU 830619 830953 -9218084 - ROOA_I LTR Pao -6433 416 82 6 591 405 39 0 0 chrU 830952 831004 -9218033 - ROOA_LTR LTR Pao -329 57 6 6 591 497 106 61 41 chrU 830991 831089 -9217948 + Invader2_I LTR Gypsy 2235 2334 -2258 6 591 32 57 0 0 chrU 831479 831532 -9217505 + AT_rich Low_complexity Low_complexity 1 53 0 6 591 47 0 0 0 chrU 832000 832047 -9216990 + AT_rich Low_complexity Low_complexity 1 47 0 6 591 31 26 0 0 chrU 832632 832670 -9216367 + AT_rich Low_complexity Low_complexity 1 38 0 6 591 22 56 0 0 chrU 832678 832714 -9216323 + AT_rich Low_complexity Low_complexity 1 36 0 6 591 396 348 34 51 chrU 833108 833462 -9215575 + Gypsy6_I LTR Gypsy 1437 1784 -5228 6 591 1227 331 48 45 chrU 834626 835082 -9213955 + Gypsy4_I LTR Gypsy 2255 2798 -3062 6 591 1537 33 19 0 chrU 835082 835296 -9213741 + TLD2 Unknown Unknown 1 218 0 6 591 1227 331 48 45 chrU 835296 835934 -9213103 + Gypsy4_I LTR Gypsy 2799 3562 -2298 6 591 258 299 31 31 chrU 836447 836609 -9212428 + Gypsy4_I LTR Gypsy 4123 4284 -2137 6 591 1835 34 8 29 chrU 836706 836952 -9212085 - BATUMI_LTR LTR Pao 0 272 32 6 591 23 0 0 0 chrU 837492 837515 -9211522 + AT_rich Low_complexity Low_complexity 1 23 0 6 591 47 0 0 0 chrU 839409 839456 -9209581 + AT_rich Low_complexity Low_complexity 1 47 0 6 591 587 273 16 16 chrU 839555 839745 -9209292 - Transib5 DNA Transib -1402 1599 1410 6 591 198 0 0 0 chrU 839825 839847 -9209190 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 591 822 299 152 15 chrU 840758 841298 -9207739 + QUASIMODO_I LTR Gypsy 379 992 -5068 6 591 241 326 0 0 chrU 841418 841513 -9207524 + QUASIMODO_I LTR Gypsy 898 992 -5068 6 591 851 275 56 47 chrU 841635 842146 -9206891 + QUASIMODO_I LTR Gypsy 1170 1729 -4331 6 591 323 302 7 7 chrU 842372 842512 -9206525 + QUASIMODO_I LTR Gypsy 1762 1901 -4062 6 591 846 230 41 5 chrU 842487 842719 -9206318 + QUASIMODO_I LTR Gypsy 2089 2303 -3660 6 591 30 0 0 0 chrU 843059 843089 -9205948 + AT_rich Low_complexity Low_complexity 1 30 0 6 591 21 36 0 0 chrU 843158 843186 -9205851 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 1757 256 25 25 chrU 843565 844174 -9204863 - Copia_I LTR Copia -533 4060 3452 6 591 23 0 0 0 chrU 844355 844378 -9204659 + AT_rich Low_complexity Low_complexity 1 23 0 6 591 742 280 13 13 chrU 844565 844869 -9204168 - Copia_I LTR Copia -2314 2279 1976 6 591 10761 46 14 0 chrU 844869 846173 -9202864 + BS2 LINE Jockey 2722 4043 -678 6 591 30 59 0 0 chrU 846333 846384 -9202653 + AT_rich Low_complexity Low_complexity 1 51 0 6 591 536 283 16 16 chrU 849499 849689 -9199348 - Transib5 DNA Transib -1402 1599 1410 6 591 198 0 0 0 chrU 849769 849791 -9199246 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 591 322 281 227 0 chrU 850704 850999 -9198038 + QUASIMODO_I LTR Gypsy 379 740 -5320 6 591 30 0 0 0 chrU 851307 851337 -9197700 + AT_rich Low_complexity Low_complexity 1 30 0 6 591 21 36 0 0 chrU 851406 851434 -9197603 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 21 36 0 0 chrU 851728 851756 -9197281 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 2496 261 41 23 chrU 851990 852907 -9196130 - Copia_I LTR Copia -208 4385 3452 6 591 23 0 0 0 chrU 853088 853111 -9195926 + AT_rich Low_complexity Low_complexity 1 23 0 6 591 710 284 13 13 chrU 853301 853604 -9195433 - Copia_I LTR Copia -2314 2279 1977 6 591 15797 53 13 4 chrU 853604 855587 -9193450 + BS2 LINE Jockey 2721 4721 0 6 591 30 0 0 0 chrU 855587 855617 -9193420 + AT_rich Low_complexity Low_complexity 1 30 0 6 591 1827 309 73 58 chrU 855618 857406 -9191631 - Copia_I LTR Copia -2624 1969 156 6 591 25 75 0 0 chrU 857625 857678 -9191359 + AT_rich Low_complexity Low_complexity 1 53 0 6 591 2381 154 37 17 chrU 857968 858431 -9190606 + ZAM_LTR LTR Gypsy 1 472 0 6 591 264 240 79 10 chrU 858431 858503 -9190534 + ZAM_LTR LTR Gypsy 394 472 0 6 591 24011 64 36 5 chrU 858503 863308 -9185729 + ZAM_I LTR Gypsy 1 5567 -1923 6 591 41593 6 3 0 chrU 863310 867990 -9181047 - DOC LINE Jockey 0 4725 31 6 591 1012 106 11 32 chrU 868017 868184 -9180853 + ZAM_I LTR Gypsy 5553 5715 -1775 6 591 3495 18 0 4 chrU 868184 868625 -9180412 - PROTOP_A DNA P -1 1104 623 6 591 6338 63 7 0 chrU 868611 869426 -9179611 + ZAM_I LTR Gypsy 6670 7490 0 6 591 2319 131 25 20 chrU 869432 869838 -9179199 + ZAM_LTR LTR Gypsy 1 408 -64 6 591 306 24 98 0 chrU 869829 869870 -9179167 - Invader3_I LTR Gypsy -533 4355 4311 6 591 29616 16 32 1 chrU 869863 873295 -9175742 - Invader3_I LTR Gypsy -1352 3536 1 6 591 2344 35 42 0 chrU 873295 873581 -9175456 - Invader3_LTR LTR Gypsy 0 298 1 6 591 1963 261 39 24 chrU 873583 874328 -9174709 - Copia_I LTR Copia -386 4207 3452 6 591 23 0 0 0 chrU 874509 874532 -9174505 + AT_rich Low_complexity Low_complexity 1 23 0 6 591 1928 282 31 49 chrU 874767 875941 -9173096 - Copia_I LTR Copia -2338 2255 1102 6 591 25 0 0 0 chrU 876206 876231 -9172806 + AT_rich Low_complexity Low_complexity 1 25 0 6 591 920 304 63 20 chrU 876257 876750 -9172287 - Copia_I LTR Copia -3924 669 156 6 591 457 225 70 85 chrU 877496 877695 -9171342 + HMSBEAGLE_I LTR Gypsy 224 419 -6110 6 591 26 74 0 0 chrU 877728 877782 -9171255 + AT_rich Low_complexity Low_complexity 1 54 0 6 591 5186 308 38 53 chrU 878478 881356 -9167681 + HMSBEAGLE_I LTR Gypsy 1440 4272 -2257 6 591 21 36 0 0 chrU 883402 883430 -9165607 + AT_rich Low_complexity Low_complexity 1 28 0 6 591 1778 114 244 11 chrU 883628 883992 -9165045 + ACCORD2_I LTR Gypsy 263 711 -6501 6 591 1343 154 76 16 chrU 883998 884301 -9164736 + ACCORD2_I LTR Gypsy 1047 1367 -5845 6 591 198 128 0 0 chrU 884388 884427 -9164610 + (A)n Simple_repeat Simple_repeat 1 39 0 6 591 4553 74 60 1 chrU 885131 885779 -9163258 - DMCR1A LINE CR1 -31 4439 3754 6 591 41 36 0 0 chrU 885940 885995 -9163042 + AT_rich Low_complexity Low_complexity 1 55 0 6 591 236 184 12 50 chrU 886485 886565 -9162472 + A-rich Low_complexity Low_complexity 6 82 0 6 591 46 0 0 0 chrU 886752 886798 -9162239 + AT_rich Low_complexity Low_complexity 1 46 0 6 591 27 0 0 0 chrU 888679 888706 -9160331 + AT_rich Low_complexity Low_complexity 1 27 0 6 591 1637 91 0 12 chrU 889810 890056 -9158981 - BATUMI_I LTR Pao -143 7820 7578 6 591 6813 47 36 1 chrU 890043 891004 -9158033 + MDG1_I LTR Gypsy 5303 6297 -299 6 591 549 124 25 61 chrU 891004 891167 -9157870 + MDG1_I LTR Gypsy 6440 6596 0 6 591 1320 7 0 0 chrU 891184 891333 -9157704 + (TAA)n Simple_repeat Simple_repeat 3 151 0 6 591 1716 54 4 28 chrU 891333 891580 -9157457 - BATUMI_LTR LTR Pao 0 272 32 6 591 4496 66 17 5 chrU 891602 892255 -9156782 - BATUMI_I LTR Pao 0 7963 7303 6 591 2231 50 9 36 chrU 892278 892612 -9156425 + BATUMI_I LTR Pao 6427 6751 -1212 6 591 19354 90 30 73 chrU 892605 896235 -9152802 - BATUMI_I LTR Pao -4489 3474 1 6 591 1704 54 4 28 chrU 896235 896482 -9152555 - BATUMI_LTR LTR Pao 0 272 32 6 591 2804 62 0 5 chrU 896504 896892 -9152145 - BATUMI_I LTR Pao 0 7963 7578 6 591 6787 58 18 1 chrU 896879 897857 -9151180 + MDG1_I LTR Gypsy 5303 6297 -299 6 591 533 112 37 68 chrU 897857 898019 -9151018 + MDG1_I LTR Gypsy 6440 6596 0 6 591 357 86 0 0 chrU 898035 898093 -9150944 + (TAA)n Simple_repeat Simple_repeat 3 60 0 6 591 1415 138 94 10 chrU 898095 898394 -9150643 + MDG1_LTR LTR Gypsy 89 412 -30 6 591 5008 103 18 1 chrU 898399 899214 -9149823 + IDEFIX_I LTR Gypsy 4800 5628 0 6 591 4089 27 82 2 chrU 899214 899764 -9149273 + IDEFIX_LTR LTR Gypsy 1 594 0 6 591 2770 124 52 172 chrU 899770 900654 -9148383 - MDG1_I LTR Gypsy -5818 778 1 6 591 11591 187 42 52 chrU 900814 904729 -9144308 + BATUMI_I LTR Pao 3730 7836 -78 6 591 1623 58 13 45 chrU 904787 905066 -9143971 + BATUMI_LTR LTR Pao 32 272 0 6 591 10594 35 4 103 chrU 906371 907981 -9141056 + BATUMI_I LTR Pao 3592 5041 -2922 6 591 6667 125 7 13 chrU 907988 909280 -9139757 + BATUMI_I LTR Pao 5591 7112 -802 6 591 4239 68 39 5 chrU 909277 909899 -9139138 + BATUMI_I LTR Pao 7321 7963 0 6 591 1623 50 4 44 chrU 909921 910172 -9138865 + BATUMI_LTR LTR Pao 32 272 0 6 591 1740 46 4 8 chrU 912124 912366 -9136671 + TRANSIB3 DNA Transib 70 310 -2573 6 591 997 183 16 0 chrU 912377 912568 -9136469 + Gypsy12_LTR LTR Gypsy 55 248 -2088 6 591 873 113 7 32 chrU 912560 912715 -9136322 + Gypsy12A_LTR LTR Gypsy 2075 2225 -55 6 591 46 0 0 0 chrU 913142 913188 -9135849 + AT_rich Low_complexity Low_complexity 1 46 0 6 591 358 121 0 0 chrU 913204 913262 -9135775 + Gypsy12_LTR LTR Gypsy 2279 2336 0 6 591 4380 49 9 0 chrU 913262 913838 -9135199 + TRANSIB3 DNA Transib 429 1009 -1874 6 591 3322 58 15 0 chrU 913836 914299 -9134738 + TRANSIB3 DNA Transib 2391 2860 -23 6 591 1694 52 26 63 chrU 914309 914577 -9134460 - Invader2_LTR LTR Gypsy -8 258 1 6 591 195 69 0 0 chrU 914578 914607 -9134430 + (T)n Simple_repeat Simple_repeat 1 29 0 6 591 713 120 0 0 chrU 914782 914899 -9134138 + IDEFIX_I LTR Gypsy 5512 5628 0 6 591 1061 125 58 37 chrU 914899 915193 -9133844 + IDEFIX_LTR LTR Gypsy 1 350 -244 6 591 727 156 67 24 chrU 915193 915357 -9133680 - ACCORD2_LTR LTR Gypsy 0 215 45 6 591 2055 60 0 0 chrU 915452 915751 -9133286 - ACCORD2_I LTR Gypsy -452 6760 6462 6 591 7532 48 6 2 chrU 915750 916746 -9132291 - ACCORD2_I LTR Gypsy -935 6277 5278 6 591 5023 18 1 50 chrU 916752 917428 -9131609 - FB4_DM DNA Tc1 0 4089 3448 6 73 1288 20 0 0 chrU 917428 917581 -9131456 - NOF_FB DNA MuDR? 0 4347 4195 6 592 672 0 0 0 chrU 917579 917659 -9131378 - NOF_FB DNA MuDR? -3681 666 587 6 592 5247 13 11 48 chrU 917675 918402 -9130635 + FB4_DM DNA Tc1 3390 4089 0 6 592 5056 68 72 1 chrU 918402 919113 -9129924 - ACCORD2_I LTR Gypsy -1931 5281 4519 6 592 2177 57 0 9 chrU 919112 919430 -9129607 - ACCORD2_I LTR Gypsy -2965 4247 3933 6 592 1861 68 4 0 chrU 919431 919694 -9129343 - ACCORD2_I LTR Gypsy -3692 3520 3257 6 592 3841 71 86 11 chrU 919675 920583 -9128454 - ACCORD2_I LTR Gypsy -4356 2856 1836 6 592 345 123 39 123 chrU 920553 920683 -9128354 - ACCORD2_I LTR Gypsy -5184 2028 1910 6 592 5126 175 128 59 chrU 921045 922821 -9126216 - ACCORD2_I LTR Gypsy -5313 1899 1 6 592 598 201 48 105 chrU 922821 923049 -9125988 - ACCORD2_LTR LTR Gypsy 0 215 1 6 592 815 122 191 89 chrU 923049 923274 -9125763 + IDEFIX_LTR LTR Gypsy 347 594 0 6 592 3964 17 0 8 chrU 923348 923833 -9125204 - T412LTR LTR LTR 0 481 1 6 592 57706 2 3 10 chrU 923723 930674 -9118363 - DM412 LTR Gypsy 0 6897 1 6 592 3964 17 0 8 chrU 930357 930842 -9118195 - T412LTR LTR LTR 0 481 1 6 592 408 118 0 0 chrU 931404 931472 -9117565 + (TCTCG)n Simple_repeat Simple_repeat 3 70 0 6 592 2236 15 0 0 chrU 931479 931743 -9117294 + DIVER2_LTR LTR Pao 122 385 0 6 592 1430 79 5 0 chrU 931743 931946 -9117091 - ACCORD2_I LTR Gypsy -3752 3460 3257 6 592 1792 53 254 6 chrU 931927 932283 -9116754 - ACCORD2_I LTR Gypsy -4356 2856 2412 6 592 1243 33 0 90 chrU 932287 932488 -9116549 - TRANSIB1 DNA Transib -4 3010 2828 6 592 4747 43 51 16 chrU 932485 933763 -9115274 - TRANSIB1 DNA Transib -1691 1323 1 6 592 3073 84 54 10 chrU 933763 934278 -9114759 - ACCORD2_I LTR Gypsy -4796 2416 1879 6 592 18357 17 9 0 chrU 934272 936472 -9112565 - DMRT1A LINE R1 0 5183 2964 6 592 21734 18 5 0 chrU 936470 939092 -9109945 - DMRT1A LINE R1 -2515 2668 34 6 592 673 76 451 0 chrU 939088 939304 -9109733 - ACCORD2_I LTR Gypsy -4489 2723 2412 6 592 1209 38 0 94 chrU 939308 939510 -9109527 - TRANSIB1 DNA Transib -4 3010 2828 6 592 4756 40 59 16 chrU 939507 940775 -9108262 - TRANSIB1 DNA Transib -1691 1323 1 6 592 7759 151 96 88 chrU 940775 943173 -9105864 - ACCORD2_I LTR Gypsy -4796 2416 1 6 592 592 201 48 109 chrU 943173 943402 -9105635 - ACCORD2_LTR LTR Gypsy 0 215 1 6 592 812 122 191 89 chrU 943402 943627 -9105410 + IDEFIX_LTR LTR Gypsy 347 594 0 6 592 1273 113 5 5 chrU 943706 943902 -9105135 - PROTOP_B DNA P -957 196 1 6 592 240 122 0 0 chrU 944511 944552 -9104485 + (TCTCG)n Simple_repeat Simple_repeat 3 43 0 6 592 2238 18 0 11 chrU 944554 944828 -9104209 + DIVER2_LTR LTR Pao 115 385 0 6 592 1418 84 5 0 chrU 944828 945031 -9104006 - ACCORD2_I LTR Gypsy -3752 3460 3257 6 592 4102 83 46 32 chrU 945012 946393 -9102644 - ACCORD2_I LTR Gypsy -4356 2856 1565 6 592 1363 156 68 31 chrU 946401 946725 -9102312 + ROVER-LTR_DM LTR Gypsy 11 346 -21 6 592 236 103 0 0 chrU 946828 946867 -9102170 - ACCORD2_I LTR Gypsy -5899 1313 1275 6 592 1434 27 481 0 chrU 946866 947074 -9101963 + DM1731_LTR LTR Copia 29 336 0 6 592 4708 32 112 12 chrU 947074 947717 -9101320 + DM1731_I LTR Copia 1 709 -3267 6 592 2412 14 3 0 chrU 947717 948003 -9101034 + Gypsy4_LTR LTR Gypsy 1 287 0 6 592 921 34 8 0 chrU 948003 948122 -9100915 + Gypsy4_I LTR Gypsy 1 120 -6168 6 592 7854 2 0 0 chrU 948121 949030 -9100007 - FW_DM LINE Jockey -2 4690 3782 6 592 15001 2 0 0 chrU 949027 950768 -9098269 - FW_DM LINE Jockey -2951 1741 1 6 592 9022 16 0 12 chrU 950784 951908 -9097129 + Gypsy4_I LTR Gypsy 110 1220 -5068 6 592 20665 20 14 3 chrU 951906 955292 -9093745 + Gypsy4_I LTR Gypsy 2864 6288 0 6 592 2405 14 3 0 chrU 955292 955578 -9093459 + Gypsy4_LTR LTR Gypsy 1 287 0 6 592 306 73 0 0 chrU 955581 955622 -9093415 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 6 592 1779 36 0 0 chrU 955622 955841 -9093196 + DM1731_LTR LTR Copia 118 336 0 6 592 1735 118 114 32 chrU 955841 956207 -9092830 - ACCORD2_I LTR Gypsy -5931 1281 886 6 592 3302 25 0 0 chrU 956207 956600 -9092437 - Invader6_LTR LTR Gypsy 0 393 1 6 592 26021 52 37 3 chrU 956600 961000 -9088037 - Invader6_I LTR Gypsy 0 4099 1 6 592 3274 28 0 0 chrU 961000 961393 -9087644 - Invader6_LTR LTR Gypsy 0 393 1 6 592 1892 93 24 49 chrU 961393 961717 -9087320 - ACCORD2_I LTR Gypsy -6896 316 1 6 592 593 196 48 113 chrU 961717 961947 -9087090 - ACCORD2_LTR LTR Gypsy 0 215 1 6 592 788 127 191 89 chrU 961947 962172 -9086865 + IDEFIX_LTR LTR Gypsy 347 594 0 6 592 543 125 11 11 chrU 962251 962340 -9086697 - PROTOP_B DNA P -957 196 108 6 592 5290 21 75 0 chrU 962340 963292 -9085745 + PROTOP_A DNA P 82 1105 0 6 592 429 103 0 0 chrU 963894 963962 -9085075 + (TCTCG)n Simple_repeat Simple_repeat 3 70 0 6 592 1444 17 0 0 chrU 963969 964142 -9084895 + DIVER2_LTR LTR Pao 122 294 -91 6 592 846 0 0 0 chrU 964142 964236 -9084801 + (TTCTC)n Simple_repeat Simple_repeat 2 95 0 6 592 4876 89 0 7 chrU 964338 965049 -9083988 + Gypsy10_I LTR Gypsy 1572 2277 -3001 6 592 7236 230 25 28 chrU 965045 968471 -9080566 + Gypsy10_I LTR Gypsy 2589 5997 -291 6 592 539 48 0 98 chrU 968592 968684 -9080353 + Gypsy10_I LTR Gypsy 5196 5278 0 6 592 2654 61 8 3 chrU 968684 969046 -9079991 + Gypsy10_LTR LTR Gypsy 1 364 0 6 592 5815 59 60 11 chrU 969046 969930 -9079107 + QUASIMODO_I LTR Gypsy 4249 5175 -885 6 592 1688 30 0 0 chrU 969941 970176 -9078861 + QUASIMODO_I LTR Gypsy 5493 5727 -333 6 592 2569 102 8 33 chrU 970286 970738 -9078299 + QUASIMODO_LTR LTR Gypsy 79 656 -2 6 592 27 29 0 0 chrU 972375 972409 -9076628 + AT_rich Low_complexity Low_complexity 1 34 0 6 592 8449 20 15 42 chrU 972660 973796 -9075241 - PROTOP_A DNA P 0 1105 1 6 592 1395 29 6 0 chrU 973796 973969 -9075068 - PROTOP_B DNA P -979 174 1 6 592 1372 35 6 0 chrU 973969 974142 -9074895 - PROTOP_A DNA P -931 174 1 6 592 1310 120 9 161 chrU 974143 974460 -9074577 - HOBO DNA hAT -2725 291 23 6 592 35 63 0 0 chrU 975543 975606 -9073431 + AT_rich Low_complexity Low_complexity 1 63 0 6 592 27 29 0 0 chrU 976138 976172 -9072865 + AT_rich Low_complexity Low_complexity 1 34 0 6 592 1699 33 124 0 chrU 976411 976652 -9072385 + Baggins1 LINE LOA 4727 4997 -456 6 592 941 58 0 92 chrU 976648 976801 -9072236 + Baggins1 LINE LOA 5315 5453 0 6 592 879 183 80 90 chrU 977075 977387 -9071650 + TIRANT_LTR LTR Gypsy 1 309 -108 6 592 3368 5 7 7 chrU 977433 977847 -9071190 + DM297_LTR LTR Gypsy 1 414 0 6 592 51020 7 0 1 chrU 977847 984017 -9065020 + DM297_I LTR Gypsy 1 6167 0 6 592 3368 5 7 7 chrU 984017 984431 -9064606 + DM297_LTR LTR Gypsy 1 414 0 6 592 1879 79 4 0 chrU 984710 984975 -9064062 + Baggins1 LINE LOA 4762 5027 -426 6 592 35 63 0 0 chrU 986060 986123 -9062914 + AT_rich Low_complexity Low_complexity 1 63 0 6 592 29 0 0 0 chrU 986196 986225 -9062812 + AT_rich Low_complexity Low_complexity 1 29 0 6 592 27 29 0 0 chrU 987127 987161 -9061876 + AT_rich Low_complexity Low_complexity 1 34 0 6 592 426 190 0 0 chrU 987442 987521 -9061516 + NOMAD_I LTR Gypsy 1312 1390 -5182 6 592 44 20 0 0 chrU 987945 987996 -9061041 + AT_rich Low_complexity Low_complexity 1 51 0 6 592 208 281 10 0 chrU 988354 988450 -9060587 + A-rich Low_complexity Low_complexity 2 98 0 6 592 23 0 0 0 chrU 988612 988635 -9060402 + AT_rich Low_complexity Low_complexity 1 23 0 6 592 22 35 0 0 chrU 988771 988800 -9060237 + AT_rich Low_complexity Low_complexity 1 29 0 6 592 1255 330 3 3 chrU 989051 989623 -9059414 + HMSBEAGLE_I LTR Gypsy 1509 2080 -4449 6 592 1219 115 34 8 chrU 989755 990016 -9059021 + DM412 LTR Gypsy 1305 1572 -5325 6 592 728 234 29 104 chrU 990016 990390 -9058647 + ROVER-LTR_DM LTR Gypsy 1 346 -21 6 592 6508 239 86 34 chrU 990390 992981 -9056056 + ROVER-I_DM LTR Gypsy 3 2727 -3857 6 592 17293 4 1 2 chrU 992982 995028 -9054009 + G6_DM LINE Jockey 1 2042 0 6 592 12998 219 11 8 chrU 995044 998969 -9050068 + ROVER-I_DM LTR Gypsy 2444 6420 0 6 592 243 98 0 47 chrU 998967 999010 -9050027 + ROVER-LTR_DM LTR Gypsy 1 41 -326 6 592 1511 142 7 14 chrU 999715 1000000 -9049037 + DM412 LTR Gypsy 625 907 -5990 6 592 351 85 0 33 chrU 1000014 1000075 -9048962 + DM412 LTR Gypsy 944 1002 -5895 6 592 1261 71 0 0 chrU 1000072 1000226 -9048811 - Gypsy3_I LTR Gypsy -3100 3077 2924 6 592 1601 112 40 8 chrU 1000226 1000478 -9048559 + DM412B_LTR LTR Gypsy 1 260 -311 6 592 229 208 204 15 chrU 1000474 1000606 -9048431 + T412LTR LTR LTR 302 458 -23 6 592 2648 138 0 2 chrU 1000613 1001042 -9047995 + ZAM_I LTR Gypsy 6507 6934 -556 6 592 595 332 53 28 chrU 1001040 1001436 -9047601 + Gypsy4_I LTR Gypsy 5367 5772 -516 6 592 31 44 0 0 chrU 1002239 1002284 -9046753 + AT_rich Low_complexity Low_complexity 1 45 0 6 592 242 324 9 0 chrU 1002955 1003063 -9045974 + Gypsy4_I LTR Gypsy 1628 1736 -4552 6 592 372 88 0 0 chrU 1003082 1003139 -9045898 + (TAA)n Simple_repeat Simple_repeat 3 59 0 6 592 2082 93 73 3 chrU 1003141 1003443 -9045594 + MDG1_LTR LTR Gypsy 94 416 -26 6 592 305 301 17 17 chrU 1003445 1003560 -9045477 + Gypsy10_I LTR Gypsy 1956 2070 -3208 6 592 2919 255 63 14 chrU 1003658 1004599 -9044438 + Gypsy4_I LTR Gypsy 2004 2990 -3298 6 592 490 15 30 0 chrU 1004625 1004692 -9044345 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 592 1801 121 145 56 chrU 1004692 1005191 -9043846 + IDEFIX_LTR LTR Gypsy 1 594 0 6 592 7162 79 0 3 chrU 1005674 1006635 -9042402 + IDEFIX_I LTR Gypsy 1 958 -4670 6 592 3374 18 0 57 chrU 1006635 1007057 -9041980 + Gypsy3_LTR LTR Gypsy 1 398 0 6 592 22474 52 9 8 chrU 1007057 1009880 -9039157 + IDEFIX_I LTR Gypsy 957 3782 -1846 6 592 246 194 0 0 chrU 1010720 1010787 -9038250 + A-rich Low_complexity Low_complexity 1 67 0 6 592 195 204 0 0 chrU 1011103 1011152 -9037885 + A-rich Low_complexity Low_complexity 3 51 0 6 592 2370 136 34 25 chrU 1011537 1011974 -9037063 + GTWIN_LTR LTR Gypsy 1 441 -54 6 592 546 294 40 76 chrU 1012041 1012317 -9036720 + Gypsy_DS LTR Gypsy 6030 6295 -1227 6 592 442 357 28 30 chrU 1012354 1012817 -9036220 + Gypsy_I LTR Gypsy 5962 6421 0 6 592 26 50 0 0 chrU 1012895 1012935 -9036102 + AT_rich Low_complexity Low_complexity 1 40 0 6 592 501 239 53 83 chrU 1013113 1013378 -9035659 + Gypsy3_LTR LTR Gypsy 112 368 -30 6 592 1553 79 0 18 chrU 1013414 1013634 -9035403 + IDEFIX_I LTR Gypsy 5413 5628 0 6 592 2004 75 89 53 chrU 1013689 1014027 -9035010 + IDEFIX_LTR LTR Gypsy 244 593 -1 6 592 311 113 16 0 chrU 1014027 1014089 -9034948 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 592 2663 38 76 6 chrU 1014160 1014501 -9034536 + Gypsy11_LTR LTR Gypsy 87 451 -1 6 592 338 319 0 0 chrU 1014588 1014707 -9034330 + NOMAD_I LTR Gypsy 2380 2498 -4074 6 592 2385 18 0 27 chrU 1014835 1015127 -9033910 - BATUMI_I LTR Pao -678 7285 7002 6 592 540 108 0 0 chrU 1015133 1015216 -9033821 - G4_DM LINE Jockey -35 3821 3739 6 592 2657 23 0 7 chrU 1015214 1015519 -9033518 - G4_DM LINE Jockey -451 3405 3103 6 592 635 325 34 19 chrU 1016151 1016471 -9032566 + NOMAD_I LTR Gypsy 6160 6484 -88 6 592 1111 105 17 0 chrU 1016832 1017004 -9032033 + STALKER4_LTR LTR Gypsy 1 175 -227 6 592 582 219 47 14 chrU 1017109 1017257 -9031780 + DMLTR5 LTR Gypsy 66 218 -48 6 592 2029 102 38 73 chrU 1017289 1017661 -9031376 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 6 592 58 47 0 0 chrU 1017676 1017762 -9031275 + AT_rich Low_complexity Low_complexity 1 86 0 6 592 3357 130 94 0 chrU 1017933 1018686 -9030351 + HMSBEAGLE_I LTR Gypsy 1212 2035 -4494 6 592 2519 161 19 7 chrU 1018680 1019105 -9029932 + HMSBEAGLE_I LTR Gypsy 2144 2573 -3956 6 592 2340 232 14 2 chrU 1019123 1019615 -9029422 + HMSBEAGLE_I LTR Gypsy 2556 3390 -3139 6 592 2949 116 5 7 chrU 1019641 1020067 -9028970 + HMSBEAGLE_I LTR Gypsy 5187 5611 -918 6 592 564 259 23 167 chrU 1020287 1020551 -9028486 + HMSBEAGLE_I LTR Gypsy 5810 6035 -494 6 592 280 183 13 53 chrU 1020772 1020847 -9028190 + HMSBEAGLE_I LTR Gypsy 6334 6405 -124 6 592 470 141 0 0 chrU 1020946 1021024 -9028013 + HMSBEAGLE_I LTR Gypsy 6404 6481 -48 6 592 341 260 58 44 chrU 1021006 1021143 -9027894 + Gypsy9_I LTR Gypsy 1554 1692 -2985 6 592 3216 237 28 44 chrU 1021152 1022713 -9026324 + STALKER4_LTR LTR Gypsy 1 399 -3 6 592 1914 298 48 34 chrU 1022714 1023570 -9025467 + Gypsy4_I LTR Gypsy 4893 5760 -528 6 592 2647 110 75 33 chrU 1023571 1024024 -9025013 + ZAM_LTR LTR Gypsy 1 472 0 6 592 398 364 5 0 chrU 1024071 1024255 -9024782 + NOMAD_I LTR Gypsy 6132 6316 -256 6 592 538 48 5 7 chrU 1024278 1024355 -9024682 + STALKER4_LTR LTR Gypsy 130 234 -168 6 592 736 274 68 51 chrU 1027452 1027639 -9021398 + DM297_I LTR Gypsy 2339 2712 -3455 6 592 1524 29 63 0 chrU 1027639 1027844 -9021193 + TLD2 Unknown Unknown 1 218 0 6 592 736 274 68 51 chrU 1027844 1027972 -9021065 + DM297_I LTR Gypsy 2713 2972 -3195 6 592 709 145 38 143 chrU 1028952 1029161 -9019876 - Gypsy3_LTR LTR Gypsy -211 187 1 6 592 1764 115 59 0 chrU 1029161 1029431 -9019606 - Gypsy3_I LTR Gypsy 0 6177 5892 6 592 648 119 10 0 chrU 1029449 1029550 -9019487 + STALKER4_LTR LTR Gypsy 74 175 -227 6 592 1037 144 0 118 chrU 1029655 1029883 -9019154 + DMLTR5 LTR Gypsy 66 266 0 6 592 988 123 124 32 chrU 1029883 1030068 -9018969 + STALKER4_LTR LTR Gypsy 172 373 -29 6 592 3505 74 6 29 chrU 1030121 1030820 -9018217 + STALKER4_I LTR Gypsy 17 819 -5711 6 592 7783 128 45 1 chrU 1030840 1032057 -9016980 + STALKER4_I LTR Gypsy 943 2213 -4317 6 592 10088 281 10 16 chrU 1032153 1035044 -9013993 + Gypsy6_I LTR Gypsy 910 3782 -3230 6 592 14985 6 2 2 chrU 1035038 1036694 -9012343 + DOC LINE Jockey 3067 4722 -3 6 592 7691 258 47 45 chrU 1036694 1039007 -9010030 + Gypsy2_I LTR Gypsy 3056 5371 -764 6 592 934 112 406 6 chrU 1039008 1039183 -9009854 + Gypsy10_I LTR Gypsy 3361 3605 -1673 6 592 3211 24 35 0 chrU 1039183 1039555 -9009482 - DIVER2_LTR LTR Pao 0 385 1 6 592 3455 22 8 2 chrU 1039556 1039958 -9009079 - DIVER2_I LTR Pao -2 4145 3742 6 592 5024 54 5 0 chrU 1039950 1040544 -9008493 - DIVER2_I LTR Pao -753 3394 2798 6 592 1139 167 11 58 chrU 1040544 1040804 -9008233 + Gypsy5_LTR LTR Gypsy 1 248 -182 6 592 1753 169 19 92 chrU 1040804 1041227 -9007810 + Gypsy3_LTR LTR Gypsy 1 392 -6 6 592 1109 212 134 88 chrU 1041313 1041768 -9007269 + Gypsy3_I LTR Gypsy 27 502 -5675 6 592 1401 56 0 0 chrU 1041869 1042048 -9006989 + (CAAGG)n Simple_repeat Simple_repeat 1 179 0 6 592 1316 39 0 11 chrU 1042069 1042199 -9006838 + (CAAGG)n Simple_repeat Simple_repeat 1 129 0 6 592 1317 78 0 0 chrU 1042199 1042378 -9006659 + (CAAGA)n Simple_repeat Simple_repeat 1 179 0 6 592 1431 54 0 2 chrU 1042378 1042639 -9006398 + (CAAGG)n Simple_repeat Simple_repeat 1 260 0 6 592 471 78 0 0 chrU 1042639 1042703 -9006334 + (CAAGA)n Simple_repeat Simple_repeat 1 64 0 6 592 929 48 40 0 chrU 1042705 1042750 -9006287 + DMRT1B LINE R1 2964 3008 -2175 6 592 215 55 0 53 chrU 1042750 1042788 -9006249 + (TATAG)n Simple_repeat Simple_repeat 3 38 0 6 592 929 48 40 0 chrU 1042788 1042867 -9006170 + DMRT1B LINE R1 3009 3091 -2092 6 592 4341 35 0 2 chrU 1042892 1043403 -9005634 + DMRT1B LINE R1 3590 4099 -1084 6 592 5453 42 30 0 chrU 1043414 1044087 -9004950 + DMRT1B LINE R1 4201 4893 -290 6 592 264 75 0 0 chrU 1044088 1044128 -9004909 + DMRT1B LINE R1 5142 5181 -2 6 592 21 36 0 0 chrU 1044205 1044233 -9004804 + AT_rich Low_complexity Low_complexity 1 28 0 6 592 314 254 88 40 chrU 1045261 1045409 -9003628 + Ulysses_I LTR Gypsy 3937 4091 -2290 6 592 344 312 0 0 chrU 1045566 1045662 -9003375 + Ulysses_I LTR Gypsy 4284 4379 -2002 6 592 555 308 15 15 chrU 1045738 1045939 -9003098 + Ulysses_I LTR Gypsy 4659 4859 -1522 6 592 857 131 20 7 chrU 1045956 1046102 -9002935 + DNAREP1_DM LINE Penelope 223 370 -224 6 592 325 325 38 87 chrU 1046403 1046588 -9002449 + Ulysses_I LTR Gypsy 5406 5581 -800 6 592 489 293 7 0 chrU 1046615 1046755 -9002282 + Ulysses_I LTR Gypsy 5680 5820 -561 6 592 251 290 0 14 chrU 1046783 1046853 -9002184 - DOC LINE Jockey -4009 716 648 6 592 286 49 24 24 chrU 1047164 1047206 -9001831 - PROTOP_B DNA P -5 1148 1107 6 592 925 161 313 2 chrU 1047953 1048388 -9000649 + DMCR1A LINE CR1 1673 2242 -2228 6 592 24 0 0 0 chrU 1048388 1048412 -9000625 + AT_rich Low_complexity Low_complexity 1 24 0 6 9 2781 0 0 0 chrU 1048412 1048710 -9000327 - Invader3_LTR LTR Gypsy 0 298 1 6 593 44908 1 6 0 chrU 1048710 1048821 -9000216 - Invader3_I LTR Gypsy 0 4888 4778 6 593 218 32 32 0 chrU 1048821 1048852 -9000185 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6 593 44908 1 6 0 chrU 1048852 1053598 -8995439 - Invader3_I LTR Gypsy -111 4777 2 6 593 2757 3 0 0 chrU 1053598 1053896 -8995141 - Invader3_LTR LTR Gypsy 0 298 1 6 593 443 181 68 68 chrU 1053916 1054062 -8994975 + DMCR1A LINE CR1 2289 2434 -2036 6 593 501 268 76 28 chrU 1054062 1054273 -8994764 + DNAREP1_DM LINE Penelope 2 222 -372 6 593 424 174 64 104 chrU 1054354 1054527 -8994510 + MAX_I LTR Pao 1 166 -7748 6 593 280 193 18 0 chrU 1054751 1054808 -8994229 + MAX_I LTR Pao 2204 2261 -5653 6 593 492 159 8 108 chrU 1054861 1054981 -8994056 + DM297_LTR LTR Gypsy 1 108 -306 6 593 306 137 611 27 chrU 1054948 1055056 -8993981 + DM176_LTR LTR Gypsy 130 300 -207 6 593 1278 204 68 16 chrU 1055043 1055366 -8993671 + DM176_LTR LTR Gypsy 168 507 0 6 593 1910 24 0 0 chrU 1055376 1055588 -8993449 - Gypsy6_LTR LTR Gypsy 0 407 196 6 593 48298 19 27 23 chrU 1055583 1061397 -8987640 - Gypsy6_I LTR Gypsy -1176 5836 1 6 593 3575 27 0 0 chrU 1061397 1061804 -8987233 - Gypsy6_LTR LTR Gypsy 0 407 1 6 593 532 234 48 92 chrU 1061950 1062157 -8986880 - Gypsy3_LTR LTR Gypsy -200 198 1 6 593 373 332 33 29 chrU 1062516 1062761 -8986276 + NOMAD_I LTR Gypsy 6101 6346 -226 6 593 23 0 0 0 chrU 1063406 1063429 -8985608 + AT_rich Low_complexity Low_complexity 1 23 0 6 593 3085 179 109 3 chrU 1063547 1064181 -8984856 + MAX_I LTR Pao 1685 2385 -5529 6 593 450 180 273 0 chrU 1064224 1064352 -8984685 + MAX_I LTR Pao 2510 2672 -5242 6 593 478 209 0 0 chrU 1064365 1064456 -8984581 + MAX_I LTR Pao 2746 2836 -5078 6 593 1288 118 103 14 chrU 1064453 1064530 -8984507 - DNAREP1_DM LINE Penelope -13 581 482 6 593 189 0 0 0 chrU 1064530 1064551 -8984486 + (CATATA)n Simple_repeat Simple_repeat 2 22 0 6 593 1288 118 103 14 chrU 1064551 1064696 -8984341 - DNAREP1_DM LINE Penelope -113 481 340 6 593 1095 103 82 62 chrU 1064983 1065191 -8983846 + DNAREP1_DM LINE Penelope 261 472 -122 6 593 4829 29 8 2 chrU 1065425 1065448 -8983589 - IDEFIX_LTR LTR Gypsy 0 594 568 6 593 197 98 24 0 chrU 1065448 1065489 -8983548 + (TA)n Simple_repeat Simple_repeat 1 42 0 6 593 4829 29 8 2 chrU 1065489 1066055 -8982982 - IDEFIX_LTR LTR Gypsy -27 567 2 6 593 9228 28 48 1 chrU 1066055 1067745 -8981292 - IDEFIX_I LTR Gypsy 0 5628 3859 6 593 3359 46 1 14 chrU 1067745 1068184 -8980853 + STALKER4_LTR LTR Gypsy 1 399 -3 6 593 28 48 0 0 chrU 1068272 1068314 -8980723 + AT_rich Low_complexity Low_complexity 1 42 0 6 593 48998 24 11 6 chrU 1068317 1074427 -8974610 + STALKER4_I LTR Gypsy 341 6530 0 6 593 3185 50 22 12 chrU 1074427 1074857 -8974180 + STALKER4_LTR LTR Gypsy 1 399 -3 6 593 18018 45 25 6 chrU 1074857 1077202 -8971835 - IDEFIX_I LTR Gypsy -1766 3862 1473 6 593 194 0 0 37 chrU 1077202 1077229 -8971808 + (TA)n Simple_repeat Simple_repeat 1 26 0 6 593 2998 3 0 0 chrU 1077229 1077558 -8971479 - TRANSPAC_LTR LTR Gypsy -1 329 1 6 593 40359 2 0 0 chrU 1077557 1082147 -8966890 - TRANSPAC_I LTR Gypsy 0 4590 1 6 593 3006 3 0 0 chrU 1082147 1082477 -8966560 - TRANSPAC_LTR LTR Gypsy 0 330 1 6 593 12156 24 4 0 chrU 1082478 1083930 -8965107 - IDEFIX_I LTR Gypsy -4170 1458 1 6 593 25 0 0 0 chrU 1084233 1084258 -8964779 + AT_rich Low_complexity Low_complexity 1 25 0 6 593 4813 22 22 0 chrU 1084448 1085029 -8964008 - IDEFIX_LTR LTR Gypsy 0 594 1 6 593 508 163 20 0 chrU 1085029 1085127 -8963910 + DNAREP1_DM LINE Penelope 495 594 0 6 593 514 149 460 0 chrU 1085125 1085286 -8963751 + DMCR1A LINE CR1 2436 2670 -1800 6 593 243 219 68 14 chrU 1085368 1085442 -8963595 + DMCR1A LINE CR1 3147 3224 -1246 6 593 569 172 78 0 chrU 1085442 1085558 -8963479 + DMCR1A LINE CR1 3367 3491 -979 6 593 8150 40 32 23 chrU 1086305 1087400 -8961637 - PROTOP_A DNA P 0 1105 1 6 593 9524 18 0 0 chrU 1088064 1089169 -8959868 + PROTOP_A DNA P 1 1105 0 6 593 488 244 114 0 chrU 1089381 1089504 -8959533 - DIVER2_I LTR Pao -5 4142 4006 6 593 449 256 346 14 chrU 1089585 1089886 -8959151 - DIVER2_I LTR Pao -527 3620 3220 6 593 362 172 58 0 chrU 1090579 1090666 -8958371 + DNAREP1_DM LINE Penelope 503 594 0 6 593 519 140 17 86 chrU 1090707 1090824 -8958213 + Invader1_I LTR Gypsy 1 109 -314 6 593 4482 92 10 3 chrU 1090829 1091497 -8957540 + Invader1_I LTR Gypsy 239 825 -2361 6 593 363 92 0 167 chrU 1091495 1091573 -8957464 + Invader1_LTR LTR Gypsy 359 423 0 6 593 747 139 166 0 chrU 1091587 1091738 -8957299 - DNAREP1_DM LINE Penelope -159 435 260 6 593 509 202 0 0 chrU 1091806 1091910 -8957127 - DNAREP1_DM LINE Penelope -471 123 20 6 593 24 53 0 0 chrU 1092945 1092983 -8956054 + AT_rich Low_complexity Low_complexity 1 38 0 6 593 2827 33 0 0 chrU 1092986 1093322 -8955715 - DM1731_LTR LTR Copia 0 336 1 6 593 35272 9 1 7 chrU 1093322 1097320 -8951717 - DM1731_I LTR Copia 0 3976 1 6 593 2827 33 0 0 chrU 1097320 1097656 -8951381 - DM1731_LTR LTR Copia 0 336 1 6 593 4629 81 229 9 chrU 1098056 1098932 -8950105 + FB4_DM DNA Tc1 1 1069 -3020 6 593 1154 147 80 35 chrU 1098986 1099275 -8949762 + FB4_DM DNA Tc1 2898 3199 -890 6 593 26 64 0 0 chrU 1099683 1099730 -8949307 + AT_rich Low_complexity Low_complexity 1 47 0 6 593 422 128 139 13 chrU 1099741 1099820 -8949217 - DNAREP1_DM LINE Penelope -110 484 396 6 593 4266 109 85 4 chrU 1099820 1100651 -8948386 + S_DM DNA Tc1 91 989 -747 6 593 9331 13 16 0 chrU 1100651 1101739 -8947298 + PROTOP_A DNA P 1 1105 0 6 593 4725 120 7 1 chrU 1101739 1102489 -8946548 + S_DM DNA Tc1 983 1736 0 6 593 21 0 0 0 chrU 1103128 1103149 -8945888 + AT_rich Low_complexity Low_complexity 1 21 0 6 593 572 153 0 0 chrU 1103677 1103788 -8945249 - S_DM DNA Tc1 -1 1735 1625 6 593 3467 110 6 0 chrU 1103786 1104304 -8944733 - S_DM DNA Tc1 -233 1503 983 6 593 9267 16 16 0 chrU 1104304 1105392 -8943645 - PROTOP_A DNA P 0 1105 1 6 593 4510 112 85 1 chrU 1105392 1106263 -8942774 - S_DM DNA Tc1 -747 989 46 6 593 2731 86 3 0 chrU 1107450 1107822 -8941215 + STALKER4_LTR LTR Gypsy 1 373 -29 6 593 22 35 0 0 chrU 1107943 1107972 -8941065 + AT_rich Low_complexity Low_complexity 1 29 0 6 593 416 216 54 0 chrU 1107981 1108092 -8940945 + STALKER4_I LTR Gypsy 244 360 -6170 6 593 9551 17 0 0 chrU 1108092 1109197 -8939840 - PROTOP_A DNA P 0 1105 1 6 593 27442 25 18 0 chrU 1131452 1134824 -8914213 - DMCR1A LINE CR1 0 4470 1039 6 593 2233 35 69 0 chrU 1134817 1135107 -8913930 + DM1731_LTR LTR Copia 27 336 0 6 593 7330 24 22 0 chrU 1135107 1136019 -8913018 + DM1731_I LTR Copia 1 932 -3044 6 593 5633 5 1 0 chrU 1136020 1136677 -8912360 + IVK_DM LINE I 4744 5401 -1 6 593 27396 26 18 0 chrU 1136795 1140167 -8908870 - DMCR1A LINE CR1 0 4470 1039 6 593 2233 35 69 0 chrU 1140160 1140450 -8908587 + DM1731_LTR LTR Copia 27 336 0 6 593 11074 22 15 0 chrU 1140450 1141803 -8907234 + DM1731_I LTR Copia 1 1373 -2603 6 593 19679 16 7 2 chrU 1141794 1144167 -8904870 + DM1731_I LTR Copia 1593 3976 0 6 593 2443 36 7 0 chrU 1144167 1144473 -8904564 + DM1731_LTR LTR Copia 29 336 0 6 593 4223 29 17 0 chrU 1144473 1144990 -8904047 - DMCR1A LINE CR1 -3422 1048 523 6 593 3417 7 0 2 chrU 1145017 1145420 -8903617 - STALKER4_LTR LTR Gypsy 0 402 1 6 593 47156 23 11 6 chrU 1145420 1151606 -8897431 - STALKER4_I LTR Gypsy 0 6530 242 6 593 289 96 0 37 chrU 1151780 1151834 -8897203 - STALKER4_I LTR Gypsy -7350 52 1 6 593 330 25 0 0 chrU 1151834 1151861 -8897176 - STALKER4_I LTR Gypsy -6503 27 1 6 593 3408 10 0 2 chrU 1151861 1152264 -8896773 - STALKER4_LTR LTR Gypsy 0 402 1 6 593 817 20 0 0 chrU 1152264 1152364 -8896673 - DMCR1A LINE CR1 -3944 526 427 6 593 22998 21 6 0 chrU 1152363 1155145 -8893892 - DMRT1B LINE R1 -1 5182 2384 6 593 8828 21 26 0 chrU 1155147 1156240 -8892797 - DMRT1B LINE R1 -4072 1111 1 6 593 2940 36 67 12 chrU 1156389 1156805 -8892232 - DMCR1A LINE CR1 -4030 440 2 6 593 424 309 23 23 chrU 1156858 1157073 -8891964 - Gypsy12_I LTR Gypsy -3974 1572 1358 6 593 26 30 0 0 chrU 1157600 1157633 -8891404 + AT_rich Low_complexity Low_complexity 1 33 0 6 593 1575 293 24 16 chrU 1159940 1160689 -8888348 - HMSBEAGLE_I LTR Gypsy -851 5678 4924 6 593 3845 312 36 32 chrU 1160717 1162851 -8886186 - HMSBEAGLE_I LTR Gypsy -1738 4791 2650 6 593 416 209 9 9 chrU 1163125 1163236 -8885801 - HMSBEAGLE_I LTR Gypsy -4097 2432 2322 6 593 650 309 17 20 chrU 1163346 1163646 -8885391 - HMSBEAGLE_I LTR Gypsy -4791 1738 1440 6 593 26 74 0 0 chrU 1164342 1164396 -8884641 + AT_rich Low_complexity Low_complexity 1 54 0 6 593 359 236 70 85 chrU 1164429 1164628 -8884409 - HMSBEAGLE_I LTR Gypsy -6110 419 224 6 593 2376 59 20 6 chrU 1166668 1167011 -8882026 + TC1-2_DM DNA Tc1 1 348 -1296 6 593 5339 41 56 8 chrU 1167008 1167762 -8881275 + TC1-2_DM DNA Tc1 855 1644 0 6 593 34 24 0 0 chrU 1168224 1168265 -8880772 + AT_rich Low_complexity Low_complexity 1 41 0 6 593 1222 62 0 63 chrU 1168269 1168459 -8880578 - Baggins1 LINE LOA -278 5175 4998 6 593 1978 55 0 0 chrU 1168453 1168750 -8880287 - Baggins1 LINE LOA -1035 4418 4058 6 593 4046 58 22 0 chrU 1168772 1169309 -8879728 - Baggins1 LINE LOA -1576 3877 3329 6 593 5581 37 32 0 chrU 1169314 1170035 -8879002 - DMCR1A LINE CR1 -105 4365 3622 6 593 10793 60 63 0 chrU 1170040 1171513 -8877524 - Baggins1 LINE LOA -2123 3330 1765 6 593 3652 69 92 3 chrU 1171536 1172241 -8876796 - Baggins1 LINE LOA -4631 822 1 6 593 21 89 0 0 chrU 1172314 1172370 -8876667 + AT_rich Low_complexity Low_complexity 1 56 0 6 593 1221 30 24 6 chrU 1172387 1172557 -8876480 - DMCR1A LINE CR1 -65 4405 4233 6 593 4090 53 23 11 chrU 1172565 1173120 -8875917 - Baggins1 LINE LOA -1563 3890 3329 6 593 5089 30 0 0 chrU 1173125 1173758 -8875279 - DMCR1A LINE CR1 -105 4365 3733 6 593 6670 39 99 25 chrU 1173760 1174760 -8874277 - PROTOP_A DNA P -31 1074 1 6 593 474 136 112 11 chrU 1174771 1174860 -8874177 - LINEJ1_DM LINE Jockey -2447 2573 2476 6 593 944 18 0 0 chrU 1174874 1174985 -8874052 + DIVER2_LTR LTR Pao 1 111 -274 6 593 1920 54 0 0 chrU 1174981 1175241 -8873796 - Gypsy10_LTR LTR Gypsy -104 260 1 6 593 1453 215 9 9 chrU 1175241 1175571 -8873466 - TOM_I LTR Gypsy -2840 3272 2943 6 593 2140 50 67 0 chrU 1175572 1175871 -8873166 - FW3_DM LINE Jockey -2124 1008 690 6 593 1392 82 9 27 chrU 1175845 1176070 -8872967 - FW3_DM LINE Jockey -2763 369 149 6 593 329 192 109 32 chrU 1176108 1176264 -8872773 - DOC2_DM LINE Jockey -3952 841 674 6 593 9140 17 0 0 chrU 1176273 1177378 -8871659 + PROTOP_A DNA P 1 1105 0 6 593 6914 93 16 1 chrU 1177378 1178417 -8870620 + S_DM DNA Tc1 682 1736 0 6 593 24 0 0 0 chrU 1178637 1178661 -8870376 + AT_rich Low_complexity Low_complexity 1 24 0 6 593 674 45 0 0 chrU 1179495 1179584 -8869453 - PROTOP_A DNA P -834 271 183 6 594 339 174 98 16 chrU 1179752 1179875 -8869162 - Gypsy6_LTR LTR Gypsy -119 288 156 6 594 278 267 86 8 chrU 1179920 1180037 -8869000 - MDG1_LTR LTR Gypsy -163 279 154 6 594 1374 17 63 0 chrU 1180088 1180263 -8868774 - PROTOP_A DNA P -919 186 1 6 594 256 53 0 0 chrU 1180263 1180301 -8868736 + PROTOP_A DNA P 1067 1104 -1 6 594 885 117 20 25 chrU 1180531 1180733 -8868304 - S_DM DNA Tc1 0 1736 1536 6 594 1759 143 299 4 chrU 1180975 1181530 -8867507 + FB4_DM DNA Tc1 1 719 -3370 6 594 705 164 66 0 chrU 1181616 1181768 -8867269 - PROTOP_B DNA P 0 1153 992 6 594 2362 126 33 115 chrU 1181863 1182403 -8866634 + DNAREP1_DM LINE Penelope 99 594 0 6 594 851 141 249 10 chrU 1182481 1182682 -8866355 + DNAREP1_DM LINE Penelope 195 443 -151 6 594 31 44 0 0 chrU 1183212 1183257 -8865780 + AT_rich Low_complexity Low_complexity 1 45 0 6 594 3009 90 129 0 chrU 1183520 1184031 -8865006 - DNAREP1_DM LINE Penelope 0 594 18 6 594 1183 188 119 0 chrU 1185001 1185304 -8863733 + DMCR1A LINE CR1 3975 4313 -157 6 594 5288 26 31 1 chrU 1186109 1186792 -8862245 + PROTOP_A DNA P 1 703 -402 6 594 3588 9 7 0 chrU 1186792 1187212 -8861825 + Invader1_LTR LTR Gypsy 1 423 0 6 594 3276 32 0 0 chrU 1187212 1187618 -8861419 + PROTOP_A DNA P 700 1105 0 6 594 276 212 0 121 chrU 1187618 1187708 -8861329 + Gypsy8_LTR LTR Gypsy 226 304 0 6 594 456 239 108 14 chrU 1187708 1187920 -8861117 + Gypsy8_I LTR Gypsy 1 232 -4115 6 594 257 318 0 0 chrU 1188383 1188493 -8860544 + I_DM LINE I 3363 3472 -2759 6 594 1010 139 117 27 chrU 1188503 1188725 -8860312 - DMCR1A LINE CR1 -18 4452 4211 6 594 272 306 16 8 chrU 1188920 1189042 -8859995 - DIVER2_I LTR Pao -2321 1826 1704 6 594 4493 42 108 0 chrU 1189577 1190363 -8858674 - FW2_DM LINE Jockey -23 3938 3068 6 594 1565 49 13 13 chrU 1190373 1190600 -8858437 - FW2_DM LINE Jockey -1756 2205 1979 6 594 8971 28 37 1 chrU 1190587 1191721 -8857316 - FW2_DM LINE Jockey -2115 1846 672 6 594 7401 253 50 52 chrU 1191752 1194920 -8854117 + TOM_I LTR Gypsy 1 3163 -2949 6 594 502 122 10 10 chrU 1194920 1195019 -8854018 + DOC4_DM LINE Jockey 298 396 -2395 6 594 3848 63 40 28 chrU 1195050 1195741 -8853296 - PROTOP_A DNA P 0 1153 494 6 594 2320 22 147 0 chrU 1195735 1196088 -8852949 - PROTOP_B DNA P -750 403 1 6 594 329 192 109 32 chrU 1196097 1196253 -8852784 + DOC2_DM LINE Jockey 674 841 -3952 6 594 1392 82 9 27 chrU 1196291 1196516 -8852521 + FW3_DM LINE Jockey 149 369 -2763 6 594 2103 50 70 0 chrU 1196490 1196788 -8852249 + FW3_DM LINE Jockey 690 1008 -2124 6 594 1453 215 9 9 chrU 1196789 1197119 -8851918 + TOM_I LTR Gypsy 2943 3272 -2840 6 594 2654 61 8 3 chrU 1197119 1197481 -8851556 + Gypsy10_LTR LTR Gypsy 1 364 0 6 594 16582 199 16 22 chrU 1197481 1203767 -8845270 + Gypsy10_I LTR Gypsy 1 5997 -291 6 594 539 48 0 98 chrU 1203945 1204037 -8845000 + Gypsy10_I LTR Gypsy 5196 5278 0 6 594 2576 62 20 3 chrU 1204037 1204395 -8844642 + Gypsy10_LTR LTR Gypsy 1 364 0 6 594 507 269 34 0 chrU 1204395 1204568 -8844469 + DM297_I LTR Gypsy 3331 3509 -2658 6 594 2160 234 81 13 chrU 1204576 1205526 -8843511 + TOM_I LTR Gypsy 3600 4974 -1446 6 594 7287 24 2 20 chrU 1205562 1206487 -8842550 - DIVER2_I LTR Pao -856 3291 2384 6 594 3438 19 5 7 chrU 1206957 1207377 -8841660 - DIVER2_I LTR Pao -3295 852 434 6 594 3014 62 48 0 chrU 1207578 1207845 -8841192 - DIVER2_I LTR Pao -3708 439 173 6 594 183 80 0 0 chrU 1207845 1207870 -8841167 + (TATG)n Simple_repeat Simple_repeat 3 27 0 6 594 3014 62 48 0 chrU 1207870 1208021 -8841016 - DIVER2_I LTR Pao -3975 172 2 6 594 3296 13 0 0 chrU 1208021 1208406 -8840631 - DIVER2_LTR LTR Pao 0 385 1 6 594 729 78 0 10 chrU 1208406 1208510 -8840527 - DIVER2_I LTR Pao 0 4147 4045 6 594 3955 44 6 0 chrU 1208479 1208980 -8840057 - DIVER2_I LTR Pao -3210 937 434 6 594 3291 68 0 0 chrU 1209224 1209663 -8839374 - DIVER2_I LTR Pao -3708 439 1 6 594 3147 21 13 0 chrU 1209663 1210043 -8838994 - DIVER2_LTR LTR Pao 0 385 1 6 594 438 171 102 0 chrU 1210058 1210146 -8838891 + LINEJ1_DM LINE Jockey 2477 2573 -2447 6 594 257 218 0 0 chrU 1210148 1210203 -8838834 + LINEJ1_DM LINE Jockey 2753 2807 -2213 6 594 17670 24 27 27 chrU 1210261 1212598 -8836439 - Gypsy12_LTR LTR Gypsy 0 2336 1 6 594 43393 19 37 8 chrU 1212599 1217989 -8831048 - Gypsy12_I LTR Gypsy 0 5546 1 6 594 18106 25 13 31 chrU 1217989 1220370 -8828667 - Gypsy12_LTR LTR Gypsy 0 2336 1 6 594 7233 33 60 18 chrU 1220370 1221379 -8827658 - PROTOP_A DNA P -12 1093 42 6 594 4168 27 75 23 chrU 1222530 1223764 -8825273 - Gypsy12_I LTR Gypsy -4190 1356 1 6 594 18100 25 13 32 chrU 1223764 1226146 -8822891 - Gypsy12_LTR LTR Gypsy 0 2336 1 6 594 702 30 218 0 chrU 1226146 1226247 -8822790 - PROTOP_B DNA P -12 1141 1019 6 594 2172 61 58 0 chrU 1226248 1226561 -8822476 - PROTOP_B DNA P -53 1100 770 6 594 882 42 0 0 chrU 1226579 1226723 -8822314 - PROTOP_B DNA P -439 714 571 6 594 391 39 0 0 chrU 1226816 1226867 -8822170 + Transib5 DNA Transib 5 55 -2946 6 594 3387 24 76 46 chrU 1226865 1227389 -8821648 + Transib5 DNA Transib 181 720 -2281 6 594 6814 38 17 0 chrU 1227378 1228266 -8820771 + Transib5 DNA Transib 2099 3001 0 6 594 936 295 79 0 chrU 1228280 1228673 -8820364 + DM1731_I LTR Copia 1715 2138 -1838 6 594 334 299 82 51 chrU 1228870 1229223 -8819814 + DM1731_I LTR Copia 2269 2632 -1344 6 594 958 301 44 0 chrU 1229718 1230130 -8818907 - ROO_I LTR Pao -2946 5310 4881 6 594 5297 60 3 9 chrU 1230155 1230929 -8818108 - I_DM LINE I -767 5464 4696 6 594 24 32 0 0 chrU 1231059 1231090 -8817947 + AT_rich Low_complexity Low_complexity 1 31 0 6 594 759 35 186 0 chrU 1231414 1231527 -8817510 - DNAREP1_DM LINE Penelope -8 586 453 6 594 707 114 9 0 chrU 1231531 1231645 -8817392 - DNAREP1_DM LINE Penelope -479 115 1 6 594 227 277 0 0 chrU 1231642 1231707 -8817330 - ROO_I LTR Pao -6470 1786 1722 6 594 392 129 215 69 chrU 1231745 1231932 -8817105 + Invader1_LTR LTR Gypsy 7 221 -202 6 594 9151 59 67 3 chrU 1231933 1233281 -8815756 - M4DM DNA Transib 0 1435 2 6 594 974 151 22 6 chrU 1233303 1233483 -8815554 + Invader1_LTR LTR Gypsy 239 421 -2 6 594 33 43 0 0 chrU 1233559 1233606 -8815431 + AT_rich Low_complexity Low_complexity 1 47 0 6 594 245 130 56 0 chrU 1233661 1233715 -8815322 - I_DM LINE I -5959 272 216 6 594 33902 61 38 3 chrU 1233716 1238702 -8810335 + I_DM LINE I 274 5433 -798 6 594 787 106 162 0 chrU 1238710 1238889 -8810148 + S_DM DNA Tc1 1529 1736 0 6 594 324 123 53 0 chrU 1239189 1239246 -8809791 + DOC4_DM LINE Jockey 104 163 -2628 6 594 335 306 88 0 chrU 1239298 1239468 -8809569 + ROO_I LTR Pao 5126 5310 -2946 6 594 783 231 45 35 chrU 1240036 1240346 -8808691 + ROO_I LTR Pao 5407 5719 -2537 6 594 21 36 0 0 chrU 1240541 1240569 -8808468 + AT_rich Low_complexity Low_complexity 1 28 0 6 594 198 0 0 0 chrU 1240821 1240843 -8808194 + (TAATG)n Simple_repeat Simple_repeat 3 24 0 6 594 1413 123 58 2 chrU 1241029 1241385 -8807652 - DNAREP1_DM LINE Penelope 0 594 167 6 594 27 49 0 0 chrU 1241807 1241848 -8807189 + AT_rich Low_complexity Low_complexity 1 41 0 6 594 1506 73 94 0 chrU 1241913 1242146 -8806891 + DNAREP1_DM LINE Penelope 340 594 0 6 594 27 73 0 0 chrU 1243275 1243330 -8805707 + AT_rich Low_complexity Low_complexity 1 55 0 6 594 11645 43 4 12 chrU 1243713 1245253 -8803784 + TC1-2_DM DNA Tc1 1 1528 -116 6 594 964 152 0 11 chrU 1245340 1245520 -8803517 - DNAREP1_DM LINE Penelope -416 178 1 6 594 540 90 56 0 chrU 1245517 1245606 -8803431 - DNAREP1_DM LINE Penelope -336 258 165 6 594 420 184 71 51 chrU 1245605 1245780 -8803257 - DNAREP1_DM LINE Penelope -262 332 89 6 594 725 134 147 0 chrU 1245753 1245910 -8803127 - DNAREP1_DM LINE Penelope -414 180 1 6 594 2389 69 61 48 chrU 1246254 1246650 -8802387 - Jockey2 LINE Jockey -37 3391 2991 6 594 613 199 95 16 chrU 1246956 1247145 -8801892 - DNAREP1_DM LINE Penelope -16 578 375 6 594 24 67 0 0 chrU 1247183 1247228 -8801809 + AT_rich Low_complexity Low_complexity 1 45 0 6 594 289 95 0 0 chrU 1247228 1247270 -8801767 - DNAREP1_DM LINE Penelope -550 44 3 6 594 25 31 0 0 chrU 1247283 1247315 -8801722 + AT_rich Low_complexity Low_complexity 1 32 0 6 594 503 207 104 0 chrU 1247543 1247707 -8801330 - DMCR1A LINE CR1 -80 4390 4210 6 594 507 111 0 0 chrU 1247704 1247785 -8801252 - DMCR1A LINE CR1 -453 4017 3937 6 594 2473 128 26 2 chrU 1247791 1248214 -8800823 - DMCR1A LINE CR1 -1043 3427 2995 6 594 34 0 0 0 chrU 1249415 1249449 -8799588 + AT_rich Low_complexity Low_complexity 1 34 0 6 594 689 118 31 0 chrU 1252400 1252527 -8796510 - DNAREP1_DM LINE Penelope -345 249 119 6 594 4551 48 45 2 chrU 1252535 1253138 -8795899 - Baggins1 LINE LOA -515 4938 4310 6 594 14367 45 67 2 chrU 1253148 1256662 -8792375 - Baggins1 LINE LOA -1382 4071 330 6 594 1388 26 161 0 chrU 1256666 1256859 -8792178 - Baggins1 LINE LOA -5229 224 1 6 594 2126 166 65 40 chrU 1256859 1257429 -8791608 + BURDOCK_I LTR Gypsy 40 623 -5237 6 594 10477 43 62 3 chrU 1257433 1258842 -8790195 + TC1_DM DNA Tc1 2 1492 -174 6 594 3419 158 175 4 chrU 1258829 1260231 -8788806 + BURDOCK_I LTR Gypsy 799 2500 -3360 6 594 3264 148 100 8 chrU 1260231 1260961 -8788076 + BURDOCK_I LTR Gypsy 2642 3438 -2422 6 594 2391 157 15 11 chrU 1261055 1261554 -8787483 + BURDOCK_I LTR Gypsy 3743 4385 -1475 6 594 528 87 0 12 chrU 1261550 1261628 -8787409 + BURDOCK_I LTR Gypsy 4596 4672 -1188 6 594 2157 23 8 0 chrU 1261628 1261892 -8787145 - Invader2_LTR LTR Gypsy 0 266 1 6 594 36979 11 9 2 chrU 1261892 1266437 -8782600 - Invader2_I LTR Gypsy 0 4592 18 6 594 1520 21 16 0 chrU 1266440 1266627 -8782410 - Invader2_LTR LTR Gypsy -5 261 72 6 594 28110 9 1 1 chrU 1266629 1269955 -8779082 - FW_DM LINE Jockey 0 4692 1367 6 594 36632 2 0 0 chrU 1269928 1274184 -8774853 - DOC LINE Jockey 0 4725 471 6 594 11879 6 4 1 chrU 1274183 1275581 -8773456 - FW_DM LINE Jockey -3290 1402 1 6 594 640 36 0 0 chrU 1275590 1275673 -8773364 - Invader2_LTR LTR Gypsy -183 83 1 6 594 1735 143 123 18 chrU 1275673 1276126 -8772911 + BURDOCK_I LTR Gypsy 4670 5170 -690 6 594 728 126 0 135 chrU 1276178 1276334 -8772703 + BURDOCK_I LTR Gypsy 5726 5860 0 6 594 7076 108 17 18 chrU 1276468 1277607 -8771430 - DOC LINE Jockey -736 3989 2852 6 594 27 0 0 0 chrU 1277747 1277774 -8771263 + AT_rich Low_complexity Low_complexity 1 27 0 6 594 22 0 0 0 chrU 1278199 1278221 -8770816 + AT_rich Low_complexity Low_complexity 1 22 0 6 594 26 74 0 0 chrU 1278589 1278643 -8770394 + AT_rich Low_complexity Low_complexity 1 54 0 6 594 242 172 17 17 chrU 1278705 1278764 -8770273 + (CATA)n Simple_repeat Simple_repeat 4 62 0 6 594 1281 63 5 50 chrU 1279033 1279232 -8769805 - BATUMI_LTR LTR Pao 0 272 83 6 594 697 327 22 60 chrU 1279696 1280015 -8769022 - NOMAD_I LTR Gypsy -233 6339 6033 6 594 356 226 0 12 chrU 1280480 1280565 -8768472 - NOMAD_I LTR Gypsy -546 6026 5943 6 594 203 152 22 0 chrU 1281052 1281098 -8767939 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 6 594 22 35 0 0 chrU 1281187 1281216 -8767821 + AT_rich Low_complexity Low_complexity 1 29 0 6 594 3597 322 62 7 chrU 1281337 1282874 -8766163 - NOMAD_I LTR Gypsy -1219 5353 3732 6 594 910 291 12 9 chrU 1282880 1283213 -8765824 - NOMAD_I LTR Gypsy -2984 3588 3255 6 594 1289 329 31 24 chrU 1283337 1283914 -8765123 - NOMAD_I LTR Gypsy -4673 1899 1319 6 594 551 249 53 75 chrU 1284409 1284635 -8764402 - NOMAD_I LTR Gypsy -5881 691 471 6 594 4652 31 10 5 chrU 1285255 1285844 -8763193 + IDEFIX_LTR LTR Gypsy 3 594 0 6 594 3291 0 0 0 chrU 1285856 1286223 -8762814 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 594 55014 4 0 1 chrU 1286223 1292959 -8756078 - ROVER-I_DM LTR Gypsy 0 6584 1 6 594 3283 0 0 0 chrU 1292959 1293325 -8755712 - ROVER-LTR_DM LTR Gypsy 0 367 2 6 594 180 0 0 0 chrU 1293325 1293345 -8755692 + (TA)n Simple_repeat Simple_repeat 1 20 0 6 594 3515 5 7 7 chrU 1293345 1293758 -8755279 + DM297_LTR LTR Gypsy 2 414 0 6 594 38518 7 0 0 chrU 1293758 1298196 -8750841 + DM297_I LTR Gypsy 1 4438 -1729 6 594 28145 4 0 19 chrU 1303196 1306540 -8742497 - DM176_I LTR Gypsy -3141 3279 1 6 594 4477 8 0 0 chrU 1306540 1307047 -8741990 - DM176_LTR LTR Gypsy 0 507 1 6 594 311 260 0 0 chrU 1307052 1307125 -8741912 + Gypsy12_I LTR Gypsy 3205 3277 -2269 6 594 1321 308 94 2 chrU 1307130 1307653 -8741384 + Gypsy12_I LTR Gypsy 3464 4034 -1512 6 594 393 279 149 59 chrU 1307988 1308277 -8740760 + Gypsy12_I LTR Gypsy 4729 5043 -503 6 594 3600 2 0 2 chrU 1308304 1308707 -8740330 - STALKER4_LTR LTR Gypsy 0 402 1 6 74 25127 7 1 0 chrU 1308707 1311586 -8737451 - STALKER4_I LTR Gypsy 0 6530 3649 6 595 23192 36 21 9 chrU 1311569 1314747 -8734290 - STALKER4_I LTR Gypsy -3004 3526 242 6 595 306 105 0 50 chrU 1314915 1314975 -8734062 - STALKER4_I LTR Gypsy -7345 57 1 6 595 345 25 0 0 chrU 1314975 1315002 -8734035 - STALKER4_I LTR Gypsy -6503 27 1 6 595 3576 5 0 2 chrU 1315002 1315405 -8733632 - STALKER4_LTR LTR Gypsy 0 402 1 6 595 614 327 26 15 chrU 1315405 1315654 -8733383 + Gypsy12_I LTR Gypsy 5043 5294 -252 6 595 369 341 6 35 chrU 1315668 1315841 -8733196 + Gypsy12_I LTR Gypsy 5356 5523 -23 6 595 1086 96 90 0 chrU 1316578 1316744 -8732293 - DNAREP1_DM LINE Penelope -48 546 366 6 595 994 107 7 0 chrU 1316749 1316899 -8732138 - DNAREP1_DM LINE Penelope -443 151 1 6 595 24 0 0 0 chrU 1317077 1317101 -8731936 + AT_rich Low_complexity Low_complexity 1 24 0 6 595 212 200 57 0 chrU 1318647 1318717 -8730320 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 595 566 181 57 173 chrU 1318868 1319169 -8729868 + DNAREP1_DM LINE Penelope 1 266 -328 6 595 791 190 96 65 chrU 1319169 1319545 -8729492 - DNAREP1_DM LINE Penelope -283 311 1 6 595 949 153 160 4 chrU 1320119 1320369 -8728668 - DMCR1A LINE CR1 -523 3947 3659 6 595 25 31 0 0 chrU 1320747 1320779 -8728258 + AT_rich Low_complexity Low_complexity 1 32 0 6 595 51 0 0 0 chrU 1321255 1321306 -8727731 + AT_rich Low_complexity Low_complexity 1 51 0 6 595 21 0 0 0 chrU 1322287 1322308 -8726729 + AT_rich Low_complexity Low_complexity 1 21 0 6 595 403 122 206 22 chrU 1323130 1323222 -8725815 + DNAREP1_DM LINE Penelope 1 109 -485 6 595 382 352 6 0 chrU 1323630 1323806 -8725231 + DIVER2_I LTR Pao 3208 3384 -763 6 595 45 0 0 0 chrU 1324477 1324522 -8724515 + AT_rich Low_complexity Low_complexity 1 45 0 6 595 8583 36 88 12 chrU 1324530 1325629 -8723408 + Baggins1 LINE LOA 4106 5288 -165 6 595 300 111 0 0 chrU 1325627 1325672 -8723365 - DNAREP1_DM LINE Penelope -33 561 517 6 595 1712 129 175 7 chrU 1325994 1326737 -8722300 + FB4_DM DNA Tc1 1108 1975 -2114 6 595 424 279 23 15 chrU 1326801 1326932 -8722105 - Invader6_I LTR Gypsy -2437 1662 1531 6 595 446 329 5 0 chrU 1326981 1327203 -8721834 - Invader6_I LTR Gypsy -2837 1262 1040 6 595 1903 145 168 14 chrU 1327674 1328144 -8720893 + DNAREP1_DM LINE Penelope 90 562 -32 6 595 1807 172 68 99 chrU 1328625 1328764 -8720273 - DNAREP1_DM LINE Penelope 0 594 446 6 595 183 129 0 0 chrU 1328764 1328795 -8720242 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 6 595 1807 172 68 99 chrU 1328795 1329202 -8719835 - DNAREP1_DM LINE Penelope -149 445 67 6 595 6815 206 107 7 chrU 1329195 1330785 -8718252 + LINEJ1_DM LINE Jockey 731 2479 -2541 6 595 254 156 0 61 chrU 1331057 1331139 -8717898 + A-rich Low_complexity Low_complexity 4 80 0 6 595 24 0 0 0 chrU 1331139 1331163 -8717874 + AT_rich Low_complexity Low_complexity 1 24 0 6 595 3103 29 21 3 chrU 1331169 1331547 -8717490 - DIVER2_LTR LTR Pao 0 385 1 6 595 13273 29 5 0 chrU 1331547 1333090 -8715947 - DIVER2_I LTR Pao 0 4147 2598 6 595 11499 43 44 2 chrU 1333094 1334531 -8714506 - DIVER2_I LTR Pao -1907 2240 744 6 595 3452 49 33 0 chrU 1334654 1335079 -8713958 - DIVER2_I LTR Pao -3708 439 1 6 595 3356 31 0 0 chrU 1335079 1335464 -8713573 - DIVER2_LTR LTR Pao 0 385 1 6 595 488 169 101 0 chrU 1335478 1335567 -8713470 + LINEJ1_DM LINE Jockey 2476 2573 -2447 6 595 282 218 0 0 chrU 1335569 1335624 -8713413 + LINEJ1_DM LINE Jockey 2753 2807 -2213 6 595 2996 55 110 2 chrU 1335666 1336203 -8712834 - PROTOP_B DNA P 0 1153 559 6 595 421 39 0 0 chrU 1336287 1336338 -8712699 + Transib5 DNA Transib 5 55 -2946 6 595 3745 22 76 46 chrU 1336336 1336862 -8712175 + Transib5 DNA Transib 181 722 -2279 6 595 4338 40 87 0 chrU 1336849 1337680 -8711357 + Transib5 DNA Transib 2099 3001 0 6 595 3216 316 55 47 chrU 1337710 1339620 -8709417 + DM1731_I LTR Copia 1733 3658 -318 6 595 694 95 0 28 chrU 1339803 1339911 -8709126 - DMCR1A LINE CR1 -2063 2407 2303 6 595 426 262 77 7 chrU 1339944 1340114 -8708923 + Gypsy10_I LTR Gypsy 3526 3695 -1583 6 595 255 262 0 70 chrU 1340295 1340381 -8708656 + Gypsy9_I LTR Gypsy 3338 3417 -1260 6 595 299 250 0 0 chrU 1340504 1340572 -8708465 + Gypsy4_I LTR Gypsy 5170 5237 -1051 6 595 694 142 67 0 chrU 1341220 1341354 -8707683 - DNAREP1_DM LINE Penelope -297 297 155 6 595 310 114 164 41 chrU 1341641 1341714 -8707323 + DNAREP1_DM LINE Penelope 43 124 -470 6 595 355 223 29 42 chrU 1341735 1341851 -8707186 + DNAREP1_DM LINE Penelope 182 412 -182 6 595 1159 173 92 26 chrU 1341869 1342185 -8706852 + DNAREP1_DM LINE Penelope 82 397 -197 6 595 418 350 40 21 chrU 1342714 1343094 -8705943 - BATUMI_I LTR Pao -1545 6418 6032 6 595 311 286 0 23 chrU 1343135 1343221 -8705816 - MAX_I LTR Pao -1794 6120 6037 6 595 420 332 73 28 chrU 1343586 1343942 -8705095 - MAX_I LTR Pao -2599 5315 4944 6 595 481 314 71 62 chrU 1344029 1344351 -8704686 - MAX_I LTR Pao -3646 4268 3944 6 595 298 298 42 16 chrU 1344691 1344841 -8704196 - MAX_I LTR Pao -5041 2873 2666 6 595 508 270 286 33 chrU 1344946 1345310 -8703727 - MAX_I LTR Pao -5401 2513 2058 6 595 22 0 0 0 chrU 1345524 1345546 -8703491 + AT_rich Low_complexity Low_complexity 1 22 0 6 595 992 187 219 16 chrU 1345646 1345965 -8703072 + DNAREP1_DM LINE Penelope 1 385 -209 6 595 21 0 0 0 chrU 1346740 1346761 -8702276 + AT_rich Low_complexity Low_complexity 1 21 0 6 595 61 0 0 0 chrU 1347552 1347613 -8701424 + AT_rich Low_complexity Low_complexity 1 61 0 6 595 36 40 0 0 chrU 1348213 1348263 -8700774 + AT_rich Low_complexity Low_complexity 1 50 0 6 595 1176 88 156 0 chrU 1348675 1348867 -8700170 - DNAREP1_DM LINE Penelope 0 594 373 6 595 47 19 0 0 chrU 1349066 1349120 -8699917 + AT_rich Low_complexity Low_complexity 1 54 0 6 595 7106 115 117 10 chrU 1349454 1350731 -8698306 - Jockey2 LINE Jockey -782 2646 1578 6 595 508 170 93 9 chrU 1350715 1350822 -8698215 - Jockey2 LINE Jockey -2432 996 881 6 595 2144 146 28 0 chrU 1350826 1351212 -8697825 - Jockey2 LINE Jockey -2826 602 345 6 595 437 82 16 0 chrU 1351260 1351321 -8697716 - Jockey2 LINE Jockey -3118 310 249 6 595 406 178 44 0 chrU 1351422 1351512 -8697525 - Jockey2 LINE Jockey -2018 1410 1317 6 595 1073 66 256 47 chrU 1351511 1351718 -8697319 - Jockey2 LINE Jockey -3178 250 1 6 595 40 0 0 0 chrU 1351780 1351820 -8697217 + AT_rich Low_complexity Low_complexity 1 40 0 6 595 374 271 41 35 chrU 1352051 1352196 -8696841 - Jockey2 LINE Jockey -376 3052 2907 6 595 22 56 0 0 chrU 1352452 1352488 -8696549 + AT_rich Low_complexity Low_complexity 1 36 0 6 595 22 70 0 0 chrU 1352924 1352967 -8696070 + AT_rich Low_complexity Low_complexity 1 43 0 6 595 23 33 0 0 chrU 1353129 1353159 -8695878 + AT_rich Low_complexity Low_complexity 1 30 0 6 595 372 236 0 0 chrU 1353189 1353278 -8695759 + DMRT1B LINE R1 1040 1128 -4055 6 595 285 253 0 46 chrU 1353257 1353344 -8695693 + DMRT1B LINE R1 2372 2454 -2729 6 595 1045 165 37 0 chrU 1353368 1353556 -8695481 + DMRT1B LINE R1 4989 5183 0 6 595 288 111 44 0 chrU 1353804 1353849 -8695188 + DMCR1A LINE CR1 4368 4414 -56 6 595 250 168 632 0 chrU 1354537 1354632 -8694405 - DNAREP1_DM LINE Penelope -165 429 275 6 595 1134 162 115 0 chrU 1354628 1354863 -8694174 - DNAREP1_DM LINE Penelope -151 443 182 6 595 2022 193 60 74 chrU 1354867 1355450 -8693587 - DNAREP1_DM LINE Penelope 0 594 20 6 595 545 46 0 0 chrU 1355465 1355530 -8693507 - DNAREP1_DM LINE Penelope -510 84 20 6 595 1948 84 3 42 chrU 1356262 1356548 -8692489 + BURDOCK_LTR LTR Gypsy 1 275 0 6 595 1306 48 0 0 chrU 1356548 1356716 -8692321 + BURDOCK_I LTR Gypsy 1 168 -5692 6 595 36182 28 9 5 chrU 1356742 1360947 -8688090 + BURDOCK_I LTR Gypsy 1641 5860 0 6 595 1901 84 3 55 chrU 1360948 1361238 -8687799 + BURDOCK_LTR LTR Gypsy 1 275 0 6 595 459 79 197 0 chrU 1362272 1362348 -8686689 - DNAREP1_DM LINE Penelope -321 273 183 6 595 25 31 0 0 chrU 1362361 1362393 -8686644 + AT_rich Low_complexity Low_complexity 1 32 0 6 595 2856 180 175 14 chrU 1363100 1363956 -8685081 + FW_DM LINE Jockey 847 1941 -2751 6 595 756 215 114 28 chrU 1363992 1364203 -8684834 + FW_DM LINE Jockey 2968 3196 -1496 6 595 23 33 0 0 chrU 1365166 1365196 -8683841 + AT_rich Low_complexity Low_complexity 1 30 0 6 595 21 36 0 0 chrU 1365871 1365899 -8683138 + AT_rich Low_complexity Low_complexity 1 28 0 6 595 1778 30 3 11 chrU 1366770 1367121 -8681916 - ROOA_LTR LTR Pao 0 386 1 6 595 5427 86 57 65 chrU 1367639 1368528 -8680509 - Mariner2_DM DNA Tc1 -30 882 1 6 595 34 72 0 0 chrU 1369391 1369460 -8679577 + AT_rich Low_complexity Low_complexity 1 69 0 6 595 2260 73 89 0 chrU 1370888 1371204 -8677833 - PROTOP_B DNA P -46 1107 764 6 595 684 48 0 0 chrU 1371203 1371286 -8677751 - PROTOP_B DNA P -10 1143 1061 6 595 385 94 0 0 chrU 1371285 1371338 -8677699 - PROTOP DNA P -477 4003 3951 6 595 36850 62 35 3 chrU 1371335 1376337 -8672700 + I_DM LINE I 318 5482 -749 6 595 798 126 129 19 chrU 1376322 1376532 -8672505 - S_DM DNA Tc1 -1426 310 78 6 595 2105 12 4 0 chrU 1376530 1376775 -8672262 - PROTOP_B DNA P -620 533 288 6 595 1381 70 86 5 chrU 1376787 1376974 -8672063 - PROTOP_B DNA P -952 201 1 6 595 419 186 109 32 chrU 1376983 1377139 -8671898 + FW3_DM LINE Jockey 674 841 -3952 6 595 1510 106 24 29 chrU 1377144 1377402 -8671635 + FW3_DM LINE Jockey 149 369 -2763 6 595 2298 50 67 0 chrU 1377376 1377675 -8671362 + FW3_DM LINE Jockey 690 1008 -2124 6 595 1608 215 9 9 chrU 1377676 1378006 -8671031 + TOM_I LTR Gypsy 2943 3272 -2840 6 595 2052 61 0 0 chrU 1378006 1378269 -8670768 + Gypsy10_LTR LTR Gypsy 1 263 -101 6 595 1006 18 0 0 chrU 1378262 1378373 -8670664 - DIVER2_LTR LTR Pao -274 111 1 6 595 513 136 112 11 chrU 1378387 1378476 -8670561 + LINEJ1_DM LINE Jockey 2476 2573 -2447 6 595 7237 33 103 29 chrU 1378487 1379487 -8669550 + PROTOP_A DNA P 1 1074 -31 6 595 5456 30 0 0 chrU 1379489 1380122 -8668915 + DMCR1A LINE CR1 3733 4365 -105 6 595 4371 53 23 11 chrU 1380127 1380682 -8668355 + Baggins1 LINE LOA 3329 3890 -1563 6 595 1321 39 39 6 chrU 1380681 1380860 -8668177 + DMCR1A LINE CR1 4221 4405 -65 6 595 21 89 0 0 chrU 1380877 1380933 -8668104 + AT_rich Low_complexity Low_complexity 1 56 0 6 595 4899 67 166 0 chrU 1381006 1381713 -8667324 + Baggins1 LINE LOA 1 824 -4629 6 595 11564 60 63 0 chrU 1381734 1383207 -8665830 + Baggins1 LINE LOA 1765 3330 -2123 6 595 2251 49 80 0 chrU 1383212 1383498 -8665539 + DMCR1A LINE CR1 3622 3930 -540 6 595 20168 31 15 0 chrU 1383492 1387879 -8661158 - DMRT1B LINE R1 -538 4645 163 6 595 180 0 0 0 chrU 1387879 1387899 -8661138 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 6 595 43670 0 0 0 chrU 1387914 1392636 -8656401 - DOC LINE Jockey 0 4725 4 6 595 1043 101 41 10 chrU 1392631 1392802 -8656235 - DMRT1B LINE R1 -4850 333 1 6 595 460 47 0 72 chrU 1392995 1393064 -8655973 - QUASIMODO_LTR LTR Gypsy -593 65 2 6 595 896 345 22 7 chrU 1393765 1394214 -8654823 - Ulysses_I LTR Gypsy -3942 2439 1984 6 595 763 129 0 24 chrU 1394214 1394341 -8654696 - Gypsy8_I LTR Gypsy -1969 2378 2255 6 595 723 196 0 12 chrU 1394363 1394523 -8654514 - Gypsy8_I LTR Gypsy -2288 2059 1902 6 595 25 31 0 0 chrU 1394665 1394697 -8654340 + AT_rich Low_complexity Low_complexity 1 32 0 6 595 5901 152 64 9 chrU 1394699 1395818 -8653219 - DMCR1A LINE CR1 -123 4347 3167 6 595 581 98 43 0 chrU 1395850 1395942 -8653095 - DMCR1A LINE CR1 -1698 2772 2677 6 595 291 189 108 0 chrU 1395944 1396018 -8653019 - DMCR1A LINE CR1 -4187 283 202 6 595 1801 65 49 0 chrU 1396209 1396456 -8652581 - QUASIMODO_LTR LTR Gypsy -347 311 53 6 595 7501 63 13 2 chrU 1396460 1397438 -8651599 - DMRT1C LINE R1 0 5443 4455 6 595 9638 72 30 4 chrU 1397925 1399231 -8649806 - DMRT1C LINE R1 -1020 4423 3084 6 595 3979 30 4 4 chrU 1399231 1399703 -8649334 + ZAM_LTR LTR Gypsy 1 472 0 6 595 66060 8 2 2 chrU 1399703 1407193 -8641844 + ZAM_I LTR Gypsy 1 7490 0 6 595 3996 28 4 4 chrU 1407193 1407665 -8641372 + ZAM_LTR LTR Gypsy 1 472 0 6 595 6596 114 19 24 chrU 1407666 1408743 -8640294 - DMRT1C LINE R1 -2356 3087 2017 6 595 21081 33 21 0 chrU 1408761 1412886 -8636151 - DMRT1B LINE R1 -800 4383 163 6 595 180 0 0 0 chrU 1412886 1412906 -8636131 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 6 595 21081 92 29 10 chrU 1412906 1413080 -8635957 - DMRT1B LINE R1 -4854 329 2 6 595 1298 5 172 0 chrU 1413402 1413600 -8635437 + CIRCE LINE Composite 2904 3135 -3221 6 595 16142 12 1 0 chrU 1413598 1415418 -8633619 + STALKER4_I LTR Gypsy 1107 2927 -3603 6 595 43128 2 0 0 chrU 1415412 1420105 -8628932 - FW_DM LINE Jockey 0 4692 1 6 595 32166 7 1 6 chrU 1420116 1423754 -8625283 + STALKER4_I LTR Gypsy 2909 6530 0 6 595 3178 63 20 15 chrU 1423754 1424185 -8624852 + STALKER4_LTR LTR Gypsy 1 399 -3 6 595 412 235 25 86 chrU 1426036 1426199 -8622838 + HMSBEAGLE_I LTR Gypsy 224 376 -6153 6 595 1737 318 28 35 chrU 1427092 1427977 -8621060 + HMSBEAGLE_I LTR Gypsy 1554 2432 -4097 6 595 6708 302 40 31 chrU 1428246 1431327 -8617710 + HMSBEAGLE_I LTR Gypsy 2644 5752 -777 6 595 198 0 0 0 chrU 1431375 1431397 -8617640 + (A)n Simple_repeat Simple_repeat 1 22 0 6 595 23 54 0 0 chrU 1431955 1431992 -8617045 + AT_rich Low_complexity Low_complexity 1 37 0 6 595 242 203 24 48 chrU 1433495 1433526 -8615511 + (CATATA)n Simple_repeat Simple_repeat 4 32 0 6 595 189 0 0 0 chrU 1433526 1433547 -8615490 + (TTTTC)n Simple_repeat Simple_repeat 4 24 0 6 595 242 203 24 48 chrU 1433547 1433598 -8615439 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 6 595 26 30 0 0 chrU 1433766 1433799 -8615238 + AT_rich Low_complexity Low_complexity 1 33 0 6 595 415 144 33 22 chrU 1434593 1434685 -8614352 - DM297_LTR LTR Gypsy -1 413 321 6 595 23 54 0 0 chrU 1434881 1434918 -8614119 + AT_rich Low_complexity Low_complexity 1 37 0 6 595 412 213 23 51 chrU 1435252 1435415 -8613622 - DNAREP1_DM LINE Penelope -154 440 160 6 595 246 258 0 29 chrU 1437436 1437504 -8611533 + Gypsy12_I LTR Gypsy 2068 2133 -3413 6 595 299 213 49 74 chrU 1438364 1438445 -8610592 - Copia_I LTR Copia -77 4516 4438 6 595 22 0 0 0 chrU 1438562 1438584 -8610453 + AT_rich Low_complexity Low_complexity 1 22 0 6 595 1061 283 49 8 chrU 1438600 1438988 -8610049 - Copia_I LTR Copia -248 4345 3942 6 595 3542 132 30 22 chrU 1439336 1439939 -8609098 - FW_DM LINE Jockey -13 4679 4072 6 595 1554 128 12 16 chrU 1439936 1440183 -8608854 - FW_DM LINE Jockey -2501 2191 1946 6 595 4453 167 123 7 chrU 1440198 1441315 -8607722 - FW_DM LINE Jockey -2995 1697 452 6 74 8237 26 26 33 chrU 1441314 1442356 -8606681 - TRANSIB1 DNA Transib -7 3007 1973 6 596 1481 141 0 97 chrU 1442362 1442652 -8606385 - FW_DM LINE Jockey -4334 358 97 6 596 4751 4 0 0 chrU 1442881 1443399 -8605638 - NOMAD_LTR LTR Gypsy 0 518 1 6 596 61374 1 1 1 chrU 1443399 1449972 -8599065 - NOMAD_I LTR Gypsy 0 6572 1 6 596 4751 4 0 0 chrU 1449972 1450490 -8598547 - NOMAD_LTR LTR Gypsy 0 518 1 6 596 396 265 15 15 chrU 1450490 1450621 -8598416 - Copia_I LTR Copia -1190 3403 3273 6 596 512 334 57 31 chrU 1450620 1450972 -8598065 - Copia_I LTR Copia -1512 3081 2721 6 596 3841 49 8 6 chrU 1451327 1451801 -8597236 - DOC3_DM LINE Jockey 0 4740 4266 6 596 8619 33 72 22 chrU 1451800 1452900 -8596137 - DOC3_DM LINE Jockey -1438 3302 2148 6 596 7621 41 36 9 chrU 1452893 1453853 -8595184 - DOC3_DM LINE Jockey -3748 992 7 6 596 251 176 0 0 chrU 1453898 1453949 -8595088 - DM297_I LTR Gypsy -3745 2422 2372 6 596 15683 30 20 1 chrU 1453981 1455813 -8593224 - DMCR1A LINE CR1 -536 3934 2067 6 596 9084 32 13 0 chrU 1455814 1456904 -8592133 - PROTOP_A DNA P -1 1104 1 6 596 10784 118 57 57 chrU 1456904 1457402 -8591635 - DMCR1A LINE CR1 -2397 2073 1575 6 596 207 0 0 0 chrU 1457402 1457425 -8591612 + (TTTAG)n Simple_repeat Simple_repeat 3 25 0 6 596 10784 118 57 57 chrU 1457425 1459000 -8590037 - DMCR1A LINE CR1 -2896 1574 2 6 596 5617 74 65 50 chrU 1459038 1459911 -8589126 - DOC3_DM LINE Jockey -1980 2760 1875 6 596 2120 39 0 0 chrU 1459879 1460135 -8588902 - Baggins1 LINE LOA -4497 956 701 6 596 5697 196 67 70 chrU 1460135 1461740 -8587297 + Gypsy12_LTR LTR Gypsy 1 1600 -736 6 596 3342 129 49 42 chrU 1461778 1462394 -8586643 + Gypsy12_LTR LTR Gypsy 1717 2336 0 6 596 10852 87 42 55 chrU 1462394 1464079 -8584958 + Gypsy12_I LTR Gypsy 1 1663 -3883 6 596 26004 97 25 4 chrU 1464083 1467636 -8581401 + Gypsy12_I LTR Gypsy 1920 5546 0 6 596 3389 208 126 62 chrU 1467635 1468754 -8580283 + Gypsy12_LTR LTR Gypsy 1 1191 -1145 6 596 2905 31 87 0 chrU 1468757 1469113 -8579924 - CIRCE LINE Composite -5969 387 1 6 596 1006 76 0 0 chrU 1469113 1469245 -8579792 - CIRCE LINE Composite 0 6356 6225 6 596 6892 56 40 102 chrU 1469242 1470321 -8578716 - CIRCE LINE Composite -364 5992 4981 6 596 2496 62 0 6 chrU 1470675 1471000 -8578037 - CIRCE LINE Composite -1376 4980 4658 6 596 18398 138 68 53 chrU 1471000 1474868 -8574169 - CIRCE LINE Composite -2431 3925 1 6 596 1110 45 0 0 chrU 1474868 1475000 -8574037 - CIRCE LINE Composite 0 6356 6225 6 596 6872 57 44 101 chrU 1474997 1476070 -8572967 - CIRCE LINE Composite -364 5992 4981 6 596 4966 68 39 25 chrU 1476424 1477146 -8571891 - CIRCE LINE Composite -1376 4980 4249 6 596 2317 114 11 41 chrU 1477147 1478374 -8570663 + DMSAT6 Satellite Satellite 1 1189 -69 6 596 11996 95 32 7 chrU 1478373 1480016 -8569021 + Gypsy12_I LTR Gypsy 3864 5546 0 6 596 4336 207 49 59 chrU 1480016 1481219 -8567818 + Gypsy12_LTR LTR Gypsy 1 1191 -1145 6 596 2905 31 87 0 chrU 1481222 1481578 -8567459 - CIRCE LINE Composite -5969 387 1 6 596 1031 68 0 0 chrU 1481578 1481710 -8567327 - CIRCE LINE Composite 0 6356 6225 6 596 6868 57 40 103 chrU 1481707 1482787 -8566250 - CIRCE LINE Composite -364 5992 4981 6 596 1791 67 202 7 chrU 1483141 1483561 -8565476 - CIRCE LINE Composite -1376 4980 4479 6 596 1307 107 0 97 chrU 1483577 1483825 -8565212 - DIVER_LTR LTR Pao 0 224 1 6 596 36745 25 1 0 chrU 1483825 1487971 -8561066 - DIVER_I LTR Pao 0 5643 1492 6 596 475 328 62 64 chrU 1488853 1490022 -8559015 + MDG3_I LTR Gypsy 2309 3475 -1413 6 596 47 0 0 0 chrU 1491418 1491465 -8557572 + AT_rich Low_complexity Low_complexity 1 47 0 6 596 1167 159 127 36 chrU 1491727 1492112 -8556925 + PROTOP DNA P 624 1043 -3437 6 596 575 118 44 0 chrU 1492109 1492226 -8556811 + PROTOP DNA P 4148 4275 -205 6 596 397 134 164 21 chrU 1492238 1492341 -8556696 - DNAREP1_DM LINE Penelope -262 332 225 6 596 540 295 69 20 chrU 1494624 1494928 -8554109 - TV1I LTR Gypsy -2068 3895 3577 6 596 2004 82 17 52 chrU 1495166 1495513 -8553524 - PROTOP DNA P -43 4437 4103 6 596 1108 275 101 43 chrU 1495963 1496843 -8552194 - TOM_I LTR Gypsy -4134 2033 1052 6 596 1581 244 92 82 chrU 1496862 1497764 -8551273 - TOM_I LTR Gypsy -5201 911 1 6 596 2870 50 79 0 chrU 1497764 1498144 -8550893 - DMTOM1_LTR LTR Gypsy 0 410 1 6 596 1058 263 88 19 chrU 1498142 1498603 -8550434 - DM176_I LTR Gypsy 0 6420 5928 6 596 2323 11 7 11 chrU 1498603 1498879 -8550158 + BLASTOPIA_LTR LTR Gypsy 1 275 0 6 596 10245 3 1 0 chrU 1498879 1500000 -8549037 + BLASTOPIA_I LTR Gypsy 1 1122 -3359 6 596 29256 2 1 0 chrU 1500000 1503356 -8545681 + BLASTOPIA_I LTR Gypsy 1123 4481 0 6 596 2165 11 7 11 chrU 1503356 1503632 -8545405 + BLASTOPIA_LTR LTR Gypsy 1 275 0 6 596 28 48 0 0 chrU 1503632 1503674 -8545363 + AT_rich Low_complexity Low_complexity 1 42 0 6 596 601 40 0 0 chrU 1504045 1504119 -8544918 - Baggins1 LINE LOA 0 5453 5380 6 596 4517 70 92 1 chrU 1504125 1504884 -8544153 - Baggins1 LINE LOA -458 4995 4168 6 596 4496 38 2 0 chrU 1504884 1505468 -8543569 - PROTOP_A DNA P 0 1105 521 6 596 2815 29 0 0 chrU 1505471 1505818 -8543219 - PROTOP_A DNA P -714 391 45 6 596 1962 162 83 7 chrU 1505818 1506240 -8542797 - IDEFIX_I LTR Gypsy -1083 4545 4092 6 596 2533 171 18 25 chrU 1506266 1506831 -8542206 - IDEFIX_I LTR Gypsy -1766 3862 3302 6 596 726 163 0 0 chrU 1506826 1506961 -8542076 - IDEFIX_I LTR Gypsy -2589 3039 2905 6 596 6453 60 119 2 chrU 1506960 1507916 -8541121 - DMRT1C LINE R1 -2 5441 4374 6 596 4877 40 3 18 chrU 1510372 1511030 -8538007 - PROTOP_A DNA P -413 692 45 6 596 1897 165 86 7 chrU 1511030 1511451 -8537586 - IDEFIX_I LTR Gypsy -1083 4545 4092 6 596 2493 174 18 25 chrU 1511477 1512042 -8536995 - IDEFIX_I LTR Gypsy -1766 3862 3302 6 596 726 163 0 0 chrU 1512037 1512172 -8536865 - IDEFIX_I LTR Gypsy -2589 3039 2905 6 596 8445 65 127 2 chrU 1512171 1513450 -8535587 - DMRT1C LINE R1 -2 5441 4002 6 596 1578 53 160 16 chrU 1513446 1513696 -8535341 - DMRT1C LINE R1 -1705 3738 3453 6 596 429 111 0 0 chrU 1513695 1513758 -8535279 - DMRT1C LINE R1 -2621 2822 2760 6 596 3312 84 155 0 chrU 1513758 1514295 -8534742 - DMRT1C LINE R1 -3026 2417 1798 6 596 1551 110 129 3 chrU 1514277 1514565 -8534472 - DMRT1C LINE R1 -3955 1488 1164 6 596 836 46 0 0 chrU 1514557 1514666 -8534371 - DMRT1C LINE R1 -4382 1061 953 6 596 684 199 0 0 chrU 1514666 1514802 -8534235 - IDEFIX_I LTR Gypsy -4545 1083 948 6 596 8701 35 2 2 chrU 1514804 1515909 -8533128 - PROTOP_A DNA P 0 1105 1 6 596 535 220 20 0 chrU 1515910 1516060 -8532977 - IDEFIX_I LTR Gypsy -4677 951 799 6 596 547 237 224 0 chrU 1516063 1516264 -8532773 - IDEFIX_I LTR Gypsy -5382 246 1 6 596 1837 118 93 25 chrU 1517421 1517882 -8531155 + MICROPIA_I LTR Gypsy 240 731 -3745 6 596 2955 80 48 26 chrU 1517879 1518339 -8530698 + MICROPIA_I LTR Gypsy 1208 1677 -2799 6 596 1619 83 155 0 chrU 1518344 1518609 -8530428 + MICROPIA_I LTR Gypsy 1810 2115 -2361 6 596 2274 103 135 44 chrU 1518606 1519379 -8529658 + MICROPIA_I LTR Gypsy 2553 3395 -1081 6 596 261 298 73 0 chrU 1519426 1519550 -8529487 + G5A_DM LINE Jockey 683 815 -4041 6 596 7596 151 44 8 chrU 1519575 1521419 -8527618 + G5A_DM LINE Jockey 1 3110 -1746 6 596 4943 47 72 0 chrU 1521417 1522093 -8526944 + G5A_DM LINE Jockey 1301 2025 -816 6 596 2308 81 13 49 chrU 1522278 1522668 -8526369 - CIRCE LINE Composite -1391 4965 4590 6 596 1516 80 4 40 chrU 1522683 1522930 -8526107 + BATUMI_LTR LTR Pao 32 269 -3 6 596 4123 48 50 23 chrU 1522935 1523589 -8525448 + BATUMI_I LTR Pao 1 672 -7291 6 596 4271 18 61 2 chrU 1523589 1524150 -8524887 + IDEFIX_LTR LTR Gypsy 1 594 0 6 596 24 0 0 0 chrU 1524340 1524364 -8524673 + AT_rich Low_complexity Low_complexity 1 24 0 6 596 304 138 0 17 chrU 1524536 1524595 -8524442 - PROTOP_A DNA P -1047 58 1 6 596 13368 18 9 0 chrU 1524618 1526280 -8522757 + IDEFIX_I LTR Gypsy 1 1677 -3951 6 596 539 53 31 186 chrU 1526276 1526304 -8522733 - BATUMI_I LTR Pao -6968 995 968 6 596 203 0 37 0 chrU 1526304 1526331 -8522706 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 6 596 539 53 31 186 chrU 1526331 1526463 -8522574 - BATUMI_I LTR Pao -6996 967 860 6 596 554 0 0 0 chrU 1526480 1526543 -8522494 - BATUMI_I LTR Pao -7900 63 1 6 596 1510 83 4 40 chrU 1526545 1526795 -8522242 - BATUMI_LTR LTR Pao 0 272 32 6 596 25 0 0 0 chrU 1526833 1526858 -8522179 + AT_rich Low_complexity Low_complexity 1 25 0 6 596 5607 40 12 1 chrU 1526879 1527650 -8521387 - MDG1_I LTR Gypsy -302 6294 5516 6 596 7907 51 2 0 chrU 1527659 1528709 -8520328 - MDG1_I LTR Gypsy -1264 5332 4281 6 596 795 290 19 42 chrU 1528816 1529194 -8519843 - HMSBEAGLE_I LTR Gypsy -3511 3018 2650 6 596 347 257 0 0 chrU 1529441 1529542 -8519495 - HMSBEAGLE_I LTR Gypsy -4095 2434 2334 6 596 712 318 3 3 chrU 1529689 1529979 -8519058 - HMSBEAGLE_I LTR Gypsy -4416 2113 1824 6 596 30 43 0 54 chrU 1530403 1530477 -8518560 + AT_rich Low_complexity Low_complexity 1 70 0 6 596 229 291 23 16 chrU 1530919 1531048 -8517989 - HMSBEAGLE_I LTR Gypsy -6176 353 224 6 596 536 136 60 35 chrU 1531589 1531788 -8517249 - MDG1_I LTR Gypsy 0 6596 6393 6 596 496 81 61 0 chrU 1531788 1531887 -8517150 - MDG1_I LTR Gypsy -345 6251 6147 6 596 3885 40 0 0 chrU 1531881 1532386 -8516651 - MDG1_I LTR Gypsy -571 6025 5521 6 596 3337 62 0 0 chrU 1532400 1532870 -8516167 - MDG1_I LTR Gypsy -1264 5332 4863 6 596 3950 145 158 34 chrU 1532868 1533816 -8515221 - GTWIN_I LTR Gypsy -5355 1066 1 6 596 2130 148 10 25 chrU 1533966 1534374 -8514663 - GTWIN_LTR LTR Gypsy -93 402 1 6 596 481 122 188 35 chrU 1534378 1534548 -8514489 + MAX_I LTR Pao 278 473 -7441 6 596 14195 65 177 89 chrU 1534795 1537568 -8511469 + MAX_I LTR Pao 557 3572 -4342 6 596 7860 46 27 4 chrU 1537558 1538599 -8510438 + MAX_I LTR Pao 3469 4882 -3032 6 596 4402 4 0 0 chrU 1538920 1539426 -8509611 - TABOR_LTR LTR Gypsy 0 506 1 6 596 27329 2 4 6 chrU 1539424 1542708 -8506329 - TABOR_I LTR Gypsy 0 6336 3057 6 596 43271 6 13 0 chrU 1542808 1548047 -8500990 + DM176_I LTR Gypsy 1116 6420 0 6 596 2208 7 0 78 chrU 1548047 1548354 -8500683 + DM176_LTR LTR Gypsy 1 283 -224 6 596 2020 20 16 0 chrU 1548355 1548608 -8500429 + DM176_LTR LTR Gypsy 251 507 0 6 596 1104 72 18 24 chrU 1548609 1548899 -8500138 - ZAM_I LTR Gypsy -6989 501 1 6 596 2501 126 38 42 chrU 1548899 1549373 -8499664 - ZAM_LTR LTR Gypsy 0 472 1 6 596 10684 36 18 1 chrU 1549373 1550701 -8498336 + DIVER2_I LTR Pao 2798 4147 0 6 596 3142 21 13 0 chrU 1550701 1551081 -8497956 + DIVER2_LTR LTR Pao 1 385 0 6 596 3277 66 0 0 chrU 1551081 1551520 -8497517 + DIVER2_I LTR Pao 1 439 -3708 6 596 4311 42 92 0 chrU 1551764 1552353 -8496684 + DIVER2_I LTR Pao 434 1076 -3071 6 596 513 47 0 0 chrU 1552339 1552403 -8496634 + DIVER2_I LTR Pao 2625 2688 -1459 6 596 525 68 0 0 chrU 1552405 1552479 -8496558 - ZAM_LTR LTR Gypsy -398 74 1 6 596 2239 52 10 0 chrU 1552497 1552805 -8496232 - ZAM_I LTR Gypsy -4 7486 7176 6 596 14582 45 3 0 chrU 1552804 1554765 -8494272 - ZAM_I LTR Gypsy -636 6854 4888 6 596 26279 67 44 21 chrU 1554776 1559533 -8489504 - ZAM_I LTR Gypsy -2654 4836 1 6 596 2722 126 38 42 chrU 1559533 1560007 -8489030 - ZAM_LTR LTR Gypsy 0 472 1 6 596 11384 35 18 1 chrU 1560007 1561335 -8487702 + DIVER2_I LTR Pao 2798 4147 0 6 596 3366 21 13 0 chrU 1561335 1561715 -8487322 + DIVER2_LTR LTR Pao 1 385 0 6 596 3510 66 0 0 chrU 1561715 1562154 -8486883 + DIVER2_I LTR Pao 1 439 -3708 6 596 4590 45 91 2 chrU 1562392 1562987 -8486050 + DIVER2_I LTR Pao 429 1076 -3071 6 596 548 47 0 0 chrU 1562973 1563037 -8486000 + DIVER2_I LTR Pao 2625 2688 -1459 6 596 557 68 0 0 chrU 1563039 1563113 -8485924 - ZAM_LTR LTR Gypsy -398 74 1 6 596 2074 62 11 0 chrU 1563131 1563404 -8485633 - ZAM_I LTR Gypsy -4 7486 7211 6 596 16441 42 1 0 chrU 1563412 1565457 -8483580 - ZAM_I LTR Gypsy -636 6854 4807 6 596 1032 164 21 64 chrU 1565496 1565731 -8483306 - Gypsy5_LTR LTR Gypsy -205 225 1 6 596 6106 43 5 3 chrU 1565731 1566498 -8482539 + DOC5_DM LINE Jockey 3914 4682 0 6 596 308 290 40 20 chrU 1566500 1566648 -8482389 - IDEFIX_I LTR Gypsy -3835 1793 1643 6 596 485 97 0 0 chrU 1566791 1566853 -8482184 + DNAREP1_DM LINE Penelope 1 62 -532 6 596 474 198 27 9 chrU 1566900 1567012 -8482025 + DNAREP1_DM LINE Penelope 194 307 -287 6 596 10768 48 41 14 chrU 1568125 1569535 -8479502 + TRANSIB2 DNA Transib 63 1510 -1334 6 596 881 90 96 7 chrU 1569534 1569680 -8479357 + TRANSIB2 DNA Transib 2471 2629 -215 6 596 976 355 49 34 chrU 1570143 1571122 -8477915 - Gypsy4_I LTR Gypsy -192 6096 5103 6 596 552 153 76 8 chrU 1571390 1571509 -8477528 - GTWIN_I LTR Gypsy -1531 4890 4764 6 596 632 307 4 4 chrU 1571511 1571746 -8477291 - Gypsy4_I LTR Gypsy -1797 4491 4133 6 596 3180 40 5 0 chrU 1571788 1572165 -8476872 - STALKER4_LTR LTR Gypsy -23 379 1 6 596 4714 18 7 5 chrU 1572165 1572765 -8476272 - STALKER4_I LTR Gypsy 0 6530 5930 6 74 3589 12 0 5 chrU 1572761 1573180 -8475857 - STALKER4_I LTR Gypsy -470 6060 5644 6 597 2357 21 3 27 chrU 1573179 1573473 -8475564 - BATUMI_I LTR Pao -678 7285 6999 6 597 29913 128 32 33 chrU 1573531 1581221 -8467816 - BATUMI_I LTR Pao -78 7836 1 6 597 2337 18 0 31 chrU 1581221 1581513 -8467524 - BATUMI_I LTR Pao -679 7284 7002 6 597 1628 0 0 0 chrU 1581510 1581686 -8467351 - STALKER4_I LTR Gypsy -879 5651 5476 6 597 24773 49 21 12 chrU 1581686 1585053 -8463984 - STALKER4_I LTR Gypsy -2776 3754 291 6 597 25 0 0 0 chrU 1585077 1585102 -8463935 + AT_rich Low_complexity Low_complexity 1 25 0 6 597 2773 40 86 0 chrU 1585243 1585592 -8463445 - STALKER4_LTR LTR Gypsy -23 379 1 6 597 364 240 10 10 chrU 1585592 1585693 -8463344 - Gypsy4_I LTR Gypsy -2017 4271 4171 6 597 2299 283 105 26 chrU 1585711 1586712 -8462325 - Gypsy4_I LTR Gypsy -3523 2765 1686 6 597 310 257 0 0 chrU 1586964 1587034 -8462003 - Gypsy4_I LTR Gypsy -5000 1288 1219 6 597 845 314 39 74 chrU 1587009 1587470 -8461567 - Gypsy4_I LTR Gypsy -3412 1265 671 6 597 234 116 0 0 chrU 1587742 1587785 -8461252 + (T)n Simple_repeat Simple_repeat 1 43 0 6 597 1503 59 54 10 chrU 1588248 1588453 -8460584 + TRANSIB2 DNA Transib 2631 2844 0 6 597 609 106 177 0 chrU 1588541 1588654 -8460383 + DNAREP1_DM LINE Penelope 7 139 -455 6 597 1411 109 242 3 chrU 1588741 1589117 -8459920 + DNAREP1_DM LINE Penelope 129 594 0 6 597 811 152 72 0 chrU 1589517 1589655 -8459382 - FW_DM LINE Jockey -328 4364 4217 6 597 1102 174 200 62 chrU 1589667 1590043 -8458994 + PROTOP_A DNA P 13 440 -665 6 597 3293 178 64 12 chrU 1590057 1590712 -8458325 - FW_DM LINE Jockey -511 4181 3493 6 597 496 139 0 0 chrU 1590727 1590806 -8458231 - FW_DM LINE Jockey -1847 2845 2767 6 597 353 292 10 35 chrU 1591137 1591336 -8457701 - TV1I LTR Gypsy -725 5238 5045 6 597 7530 59 49 48 chrU 1591940 1593068 -8455969 - DOC5_DM LINE Jockey -1033 3649 2521 6 597 4346 30 117 7 chrU 1593068 1593631 -8455406 - DOC5_DM LINE Jockey -2290 2392 1768 6 597 855 35 250 0 chrU 1593627 1593791 -8455246 - DOC5_DM LINE Jockey -3174 1508 1303 6 597 1902 58 84 0 chrU 1593794 1594059 -8454978 - DOC5_DM LINE Jockey -3499 1183 896 6 597 2022 48 196 16 chrU 1594059 1594376 -8454661 - TRANSIB2 DNA Transib 0 2844 2471 6 597 1977 64 0 26 chrU 1594396 1594667 -8454370 - TRANSIB2 DNA Transib -1705 1139 876 6 597 360 0 0 0 chrU 1594711 1594751 -8454286 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 597 2158 93 91 53 chrU 1594751 1595149 -8453888 + DM297_LTR LTR Gypsy 2 414 0 6 597 6737 80 39 29 chrU 1595149 1596207 -8452830 + DM297_I LTR Gypsy 1 1068 -5099 6 597 6572 114 72 8 chrU 1596178 1597381 -8451656 + DM297_I LTR Gypsy 1212 2458 -3654 6 597 524 83 60 0 chrU 1597383 1597467 -8451570 + DM297_I LTR Gypsy 2666 2754 -3413 6 597 4047 51 154 14 chrU 1597468 1598039 -8450998 + DM297_I LTR Gypsy 2901 3551 -2616 6 597 2128 50 36 0 chrU 1598017 1598297 -8450740 + DM297_I LTR Gypsy 3882 4171 -1996 6 597 3392 69 45 10 chrU 1598299 1598783 -8450254 + DM297_I LTR Gypsy 4869 5369 -798 6 597 1404 44 205 0 chrU 1598789 1598994 -8450043 - DOC5_DM LINE Jockey -3133 1549 1303 6 597 2249 51 3 3 chrU 1598997 1599285 -8449752 - DOC5_DM LINE Jockey -3499 1183 896 6 597 2163 44 177 16 chrU 1599285 1599607 -8449430 - TRANSIB2 DNA Transib 0 2844 2471 6 597 2015 57 0 26 chrU 1599627 1599898 -8449139 - TRANSIB2 DNA Transib -1705 1139 876 6 597 1637 113 33 36 chrU 1599947 1600248 -8448789 - ROVER-LTR_DM LTR Gypsy 0 367 68 6 597 3121 20 6 0 chrU 1600248 1600599 -8448438 + Gypsy2_LTR LTR Gypsy 1 353 0 6 597 37795 82 9 14 chrU 1600599 1607384 -8441653 + Gypsy2_I LTR Gypsy 1 7011 -1 6 597 3094 23 6 0 chrU 1607390 1607741 -8441296 + Gypsy2_LTR LTR Gypsy 1 353 0 6 597 23545 52 9 19 chrU 1607741 1613396 -8435641 + Gypsy2_I LTR Gypsy 1 5089 -1923 6 597 813 142 7 20 chrU 1613397 1613946 -8435091 + RSP Satellite Satellite 1 542 0 6 597 897 126 8 17 chrU 1613986 1614729 -8434308 + RSP Satellite Satellite 1 736 0 6 597 861 121 8 17 chrU 1614769 1616059 -8432978 + RSP Satellite Satellite 1 1278 0 6 597 669 327 55 38 chrU 1616605 1617493 -8431544 + ZAM_I LTR Gypsy 3847 5603 -1887 6 597 8450 29 32 22 chrU 1617587 1618681 -8430356 - PROTOP_A DNA P 0 1105 1 6 597 268 303 59 19 chrU 1618686 1618942 -8430095 + Gypsy5_I LTR Gypsy 4759 5024 -1485 6 597 293 317 10 0 chrU 1619873 1619974 -8429063 + NOMAD_I LTR Gypsy 564 665 -5907 6 597 2658 43 9 0 chrU 1619982 1620307 -8428730 + DMRT1A LINE R1 4844 5171 -12 6 597 258 116 43 14 chrU 1620610 1620680 -8428357 + T-rich Low_complexity Low_complexity 1 72 0 6 597 612 67 11 22 chrU 1621147 1621239 -8427798 + BS3_DM LINE Jockey 1700 1790 0 6 597 24 32 0 0 chrU 1621338 1621369 -8427668 + AT_rich Low_complexity Low_complexity 1 31 0 6 597 24 0 0 0 chrU 1621398 1621422 -8427615 + AT_rich Low_complexity Low_complexity 1 24 0 6 597 438 328 45 10 chrU 1622302 1622638 -8426399 + ZAM_I LTR Gypsy 3395 3539 -3951 6 597 525 311 8 2 chrU 1622631 1622818 -8426219 + ZAM_I LTR Gypsy 2671 2912 -3597 6 597 756 324 56 32 chrU 1623118 1623881 -8425156 + ZAM_I LTR Gypsy 4924 5603 -1887 6 597 8377 32 32 22 chrU 1624013 1625107 -8423930 - PROTOP_A DNA P 0 1105 1 6 597 264 304 63 20 chrU 1625112 1625367 -8423670 + Gypsy5_I LTR Gypsy 4759 5024 -1485 6 597 349 309 16 0 chrU 1626299 1626425 -8422612 + NOMAD_I LTR Gypsy 564 691 -5881 6 597 740 284 1 1 chrU 1626686 1626893 -8422144 + NOMAD_I LTR Gypsy 3243 3429 -3143 6 597 1461 263 8 8 chrU 1626960 1627339 -8421698 + NOMAD_I LTR Gypsy 3850 4228 -2344 6 597 26 30 0 0 chrU 1627543 1627576 -8421461 + AT_rich Low_complexity Low_complexity 1 33 0 6 597 505 281 7 0 chrU 1627710 1627849 -8421188 + NOMAD_I LTR Gypsy 4750 4889 -1683 6 597 298 291 0 0 chrU 1627908 1628018 -8421019 + NOMAD_I LTR Gypsy 5433 5542 -1030 6 597 21 0 0 0 chrU 1628129 1628150 -8420887 + AT_rich Low_complexity Low_complexity 1 21 0 6 597 183 42 0 0 chrU 1628348 1628372 -8420665 + (A)n Simple_repeat Simple_repeat 1 24 0 6 597 606 333 14 14 chrU 1629229 1629506 -8419531 + NOMAD_I LTR Gypsy 6085 6361 -211 6 597 2858 84 153 0 chrU 1629939 1630420 -8418617 - DMCR1A LINE CR1 -31 4439 3885 6 597 12990 50 28 4 chrU 1630409 1632062 -8416975 - DMCR1A LINE CR1 -887 3583 1890 6 597 26 0 0 0 chrU 1632070 1632096 -8416941 + AT_rich Low_complexity Low_complexity 1 26 0 6 597 1642 106 4 0 chrU 1632903 1633139 -8415898 - DMCR1A LINE CR1 -349 4121 3885 6 597 25507 40 16 1 chrU 1633128 1636219 -8412818 - DMCR1A LINE CR1 -887 3583 446 6 597 1383 74 0 38 chrU 1636213 1636424 -8412613 - DMCR1A LINE CR1 -4139 331 129 6 597 1169 217 64 71 chrU 1636715 1637152 -8411885 + Gypsy_LTR LTR Gypsy 29 462 -20 6 597 201 305 24 12 chrU 1637506 1637589 -8411448 + (CGA)n Simple_repeat Simple_repeat 3 86 0 6 597 323 276 62 26 chrU 1637831 1638058 -8410979 - Copia_I LTR Copia -3732 861 627 6 597 461 350 0 0 chrU 1638990 1639210 -8409827 - Gypsy4_I LTR Gypsy -2815 3473 3254 6 597 372 341 54 59 chrU 1639205 1639329 -8409708 - TIRANT_I LTR Gypsy -3499 4193 3925 6 597 1235 113 19 0 chrU 1639329 1639542 -8409495 - TLD2 Unknown Unknown 0 218 2 6 597 372 341 54 59 chrU 1639542 1639595 -8409442 - TIRANT_I LTR Gypsy -3499 3924 3806 6 597 23 68 0 0 chrU 1639947 1639991 -8409046 + AT_rich Low_complexity Low_complexity 1 44 0 6 597 263 218 38 47 chrU 1640401 1640507 -8408530 - Copia_I LTR Copia -81 4512 4408 6 597 21 0 0 0 chrU 1640581 1640602 -8408435 + AT_rich Low_complexity Low_complexity 1 21 0 6 597 269 267 28 28 chrU 1640703 1640811 -8408226 - FROGGER_I LTR Copia -123 1954 1847 6 597 254 281 11 11 chrU 1642199 1642289 -8406748 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 6 597 2003 274 48 28 chrU 1645186 1645922 -8403115 - Copia_I LTR Copia -438 4155 3420 6 597 423 83 0 0 chrU 1645922 1645982 -8403055 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 597 2003 274 48 28 chrU 1645982 1646117 -8402920 - Copia_I LTR Copia -1174 3419 3266 6 597 26015 14 13 0 chrU 1646119 1650752 -8398285 - FW_DM LINE Jockey 0 4692 1 6 597 491 314 45 13 chrU 1650829 1651206 -8397831 - Copia_I LTR Copia -1485 3108 2720 6 597 189 0 0 0 chrU 1651219 1651240 -8397797 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 6 597 1966 260 14 13 chrU 1651426 1652058 -8396979 - Copia_I LTR Copia -2314 2279 1647 6 597 309 39 62 62 chrU 1652058 1652139 -8396898 + T-rich Low_complexity Low_complexity 5 85 0 6 597 257 294 70 52 chrU 1652389 1652561 -8396476 - Copia_I LTR Copia -3317 1276 1102 6 597 1250 305 27 16 chrU 1653001 1653548 -8395489 - Copia_I LTR Copia -3885 708 156 6 597 259 170 0 0 chrU 1653581 1653628 -8395409 - PROTOP_A DNA P -551 554 508 6 597 278 98 0 0 chrU 1653586 1653627 -8395410 + PROTOP_B DNA P 499 539 -614 6 597 6965 91 4 2 chrU 1653627 1654614 -8394423 - S_DM DNA Tc1 -747 989 1 6 597 4677 29 7 18 chrU 1654663 1655264 -8393773 - IDEFIX_LTR LTR Gypsy 0 594 1 6 597 14385 52 0 1 chrU 1655264 1657147 -8391890 - IDEFIX_I LTR Gypsy 0 5628 3747 6 597 16273 42 42 16 chrU 1657145 1659384 -8389653 - IDEFIX_I LTR Gypsy -3233 2395 97 6 597 25 0 0 0 chrU 1659725 1659750 -8389287 + AT_rich Low_complexity Low_complexity 1 25 0 6 597 3886 51 86 2 chrU 1659939 1660487 -8388550 - IDEFIX_LTR LTR Gypsy 0 594 1 6 597 229 150 0 0 chrU 1660455 1660495 -8388542 + BARI1 DNA Tc1 3 42 -1708 6 597 25 75 0 0 chrU 1660528 1660581 -8388456 + AT_rich Low_complexity Low_complexity 1 53 0 6 597 274 317 8 8 chrU 1662153 1662277 -8386760 - BURDOCK_I LTR Gypsy -4866 994 871 6 597 3941 96 127 0 chrU 1662284 1662889 -8386148 + DMCR1A LINE CR1 3433 4114 -356 6 597 294 152 38 0 chrU 1662897 1662976 -8386061 + DMCR1A LINE CR1 4302 4383 -87 6 597 974 102 27 0 chrU 1663580 1663727 -8385310 + DMCR1A LINE CR1 3197 3347 -1123 6 597 201 305 24 12 chrU 1664145 1664228 -8384809 + (CGA)n Simple_repeat Simple_repeat 3 86 0 6 597 324 274 16 77 chrU 1665103 1665297 -8383740 + Invader2_I LTR Gypsy 1140 1321 -3271 6 597 358 314 10 35 chrU 1665734 1665932 -8383105 + Invader2_I LTR Gypsy 1854 2046 -2546 6 597 1024 309 97 34 chrU 1665959 1666719 -8382318 + Invader2_I LTR Gypsy 2267 3074 -1518 6 597 21 36 0 0 chrU 1666917 1666945 -8382092 + AT_rich Low_complexity Low_complexity 1 28 0 6 597 452 214 28 28 chrU 1667086 1667192 -8381845 - Gypsy6_I LTR Gypsy -1699 5313 5208 6 597 258 199 0 0 chrU 1667295 1667356 -8381681 - Gypsy4_I LTR Gypsy -1804 4484 4438 6 597 2789 338 63 22 chrU 1667413 1669126 -8379911 - Gypsy2_I LTR Gypsy -2052 4083 2300 6 597 1159 338 19 6 chrU 1669662 1670185 -8378852 - Gypsy3_I LTR Gypsy -4616 1561 1032 6 597 23 0 0 0 chrU 1672215 1672238 -8376799 + AT_rich Low_complexity Low_complexity 1 23 0 6 597 2366 164 115 33 chrU 1673445 1673533 -8375504 - DNAREP1_DM LINE Penelope 0 594 505 6 597 190 56 27 27 chrU 1673533 1673570 -8375467 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 597 2366 164 115 33 chrU 1673570 1674030 -8375007 - DNAREP1_DM LINE Penelope -90 504 3 6 597 587 255 108 47 chrU 1674421 1674783 -8374254 - M4DM DNA Transib -1049 386 3 6 597 1100 336 20 6 chrU 1674896 1675387 -8373650 - Gypsy3_I LTR Gypsy -4648 1529 1032 6 597 24 0 0 0 chrU 1677417 1677441 -8371596 + AT_rich Low_complexity Low_complexity 1 24 0 6 597 2380 162 114 35 chrU 1678648 1678736 -8370301 - DNAREP1_DM LINE Penelope 0 594 505 6 597 190 56 27 27 chrU 1678736 1678773 -8370264 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 597 2380 162 114 35 chrU 1678773 1679234 -8369803 - DNAREP1_DM LINE Penelope -90 504 3 6 597 1466 112 96 4 chrU 1679456 1679716 -8369321 - DNAREP1_DM LINE Penelope -310 284 1 6 597 1587 27 5 0 chrU 1680231 1680648 -8368389 + (TATAA)n Simple_repeat Simple_repeat 1 419 0 6 597 2132 85 0 3 chrU 1680648 1680930 -8368107 - Baggins1 LINE LOA -68 5385 5105 6 597 4100 58 57 0 chrU 1680948 1681724 -8367313 - Baggins1 LINE LOA -730 4723 3904 6 597 417 145 0 0 chrU 1681752 1681814 -8367223 - Baggins1 LINE LOA -1712 3741 3680 6 597 732 169 250 0 chrU 1682910 1683082 -8365955 + DOC3_DM LINE Jockey 4195 4409 -331 6 597 970 115 342 12 chrU 1683352 1683688 -8365349 + DNAREP1_DM LINE Penelope 137 583 -11 6 597 398 162 0 56 chrU 1690458 1690530 -8358507 + R1_DM LINE R1 2469 2536 -2820 6 597 267 160 0 0 chrU 1690527 1690577 -8358460 + R1_DM LINE R1 3024 3073 -2283 6 597 3360 88 45 0 chrU 1690592 1691059 -8357978 + DMRT1A LINE R1 1549 2036 -3147 6 597 3201 102 180 0 chrU 1691071 1691732 -8357305 + DMRT1A LINE R1 2090 2869 -2314 6 597 2547 62 65 0 chrU 1691722 1692077 -8356960 - ROOA_LTR LTR Pao -8 378 1 6 597 6477 58 73 1 chrU 1692192 1693078 -8355959 - ROOA_I LTR Pao -1503 5346 4397 6 597 6982 54 140 1 chrU 1693089 1694225 -8354812 - ROOA_I LTR Pao -2764 4085 2791 6 597 328 26 0 0 chrU 1694257 1694296 -8354741 - ROOA_LTR LTR Pao 0 386 348 6 597 27 0 0 0 chrU 1694480 1694507 -8354530 + AT_rich Low_complexity Low_complexity 1 27 0 6 597 989 152 111 36 chrU 1694611 1694836 -8354201 - MDG1_LTR LTR Gypsy -153 289 48 6 597 1554 21 0 0 chrU 1694836 1695071 -8353966 + (TTA)n Simple_repeat Simple_repeat 1 235 0 6 597 336 96 0 18 chrU 1695075 1695142 -8353895 - MDG1_I LTR Gypsy 0 6596 6543 6 597 1640 112 17 64 chrU 1695149 1695444 -8353593 + Gypsy6A_LTR LTR Gypsy 22 302 -118 6 597 33 25 0 0 chrU 1695671 1695711 -8353326 + AT_rich Low_complexity Low_complexity 1 40 0 6 597 21788 270 22 13 chrU 1695957 1702009 -8347028 + Gypsy6_I LTR Gypsy 910 7011 -1 6 597 1766 118 16 60 chrU 1702012 1702328 -8346709 + Gypsy6A_LTR LTR Gypsy 1 302 -118 6 597 380 73 36 12 chrU 1702381 1702464 -8346573 + (TA)n Simple_repeat Simple_repeat 2 86 0 6 597 2137 125 86 58 chrU 1702464 1703107 -8345930 - MDG1_I LTR Gypsy -58 6538 5878 6 597 4716 63 75 1 chrU 1703104 1703773 -8345264 - MDG1_I LTR Gypsy -942 5654 4937 6 74 6078 61 143 5 chrU 1703764 1705969 -8343068 - MDG1_I LTR Gypsy -2441 4155 1646 6 598 5815 31 59 1 chrU 1705960 1707304 -8341733 - DMCR1A LINE CR1 -2779 1691 270 6 598 192 40 0 0 chrU 1708041 1708066 -8340971 + (A)n Simple_repeat Simple_repeat 1 25 0 6 598 420 321 34 24 chrU 1708587 1708953 -8340084 + BURDOCK_I LTR Gypsy 708 1079 -5209 6 598 821 352 50 44 chrU 1710387 1710791 -8338246 + GTWIN_I LTR Gypsy 2295 2783 -3638 6 598 1570 23 19 0 chrU 1710791 1711005 -8338032 + TLD2 Unknown Unknown 1 218 0 6 598 821 352 50 44 chrU 1711005 1711626 -8337411 + GTWIN_I LTR Gypsy 2784 3538 -2883 6 598 6030 63 173 6 chrU 1711978 1713550 -8335487 - MDG1_I LTR Gypsy -3117 3479 1646 6 598 5827 33 59 4 chrU 1713541 1714888 -8334149 - DMCR1A LINE CR1 -2779 1691 270 6 598 871 349 51 38 chrU 1716714 1717120 -8331917 + Gypsy4_I LTR Gypsy 2400 3002 -4010 6 598 1595 19 19 0 chrU 1717120 1717334 -8331703 + TLD2 Unknown Unknown 1 218 0 6 598 871 349 51 38 chrU 1717334 1717973 -8331064 + Gypsy4_I LTR Gypsy 3003 3956 -3056 6 598 244 318 40 40 chrU 1718445 1718622 -8330415 + Gypsy4_I LTR Gypsy 4538 4714 -2298 6 598 259 159 73 73 chrU 1718790 1718858 -8330179 + Gypsy4_I LTR Gypsy 4324 4391 -1897 6 598 26 0 0 0 chrU 1719062 1719088 -8329949 + AT_rich Low_complexity Low_complexity 1 26 0 6 598 47 0 0 0 chrU 1720928 1720975 -8328062 + AT_rich Low_complexity Low_complexity 1 47 0 6 598 977 15 0 36 chrU 1720988 1721127 -8327910 - DMCR1A LINE CR1 -4194 276 143 6 598 324 196 0 0 chrU 1721121 1721177 -8327860 - MDG1_I LTR Gypsy -5013 1583 1528 6 598 1153 162 109 9 chrU 1721218 1721448 -8327589 - MDG1_LTR LTR Gypsy -101 341 89 6 598 1047 77 0 0 chrU 1721450 1721605 -8327432 + (TTA)n Simple_repeat Simple_repeat 2 156 0 6 598 1841 34 8 29 chrU 1721605 1721851 -8327186 - BATUMI_LTR LTR Pao 0 272 32 6 598 699 35 0 0 chrU 1721872 1721958 -8327079 + (TTA)n Simple_repeat Simple_repeat 3 88 0 6 598 3707 119 68 7 chrU 1722013 1722692 -8326345 - STALKER4_I LTR Gypsy -315 6215 5496 6 598 12360 62 88 3 chrU 1722701 1724435 -8324602 - STALKER4_I LTR Gypsy -1468 5062 3181 6 598 2457 32 0 64 chrU 1724444 1724773 -8324264 + DM1731_LTR LTR Copia 29 336 0 6 598 565 111 37 0 chrU 1724773 1724854 -8324183 - Invader1_LTR LTR Gypsy -4 419 336 6 598 939 105 18 61 chrU 1724850 1725013 -8324024 - Invader1_LTR LTR Gypsy -258 165 10 6 598 2704 119 57 0 chrU 1725013 1725451 -8323586 - Invader1_I LTR Gypsy 0 3186 2724 6 598 24 32 0 0 chrU 1725467 1725498 -8323539 + AT_rich Low_complexity Low_complexity 1 31 0 6 598 638 313 105 23 chrU 1725872 1726359 -8322678 - MICROPIA_I LTR Gypsy -648 3828 3302 6 598 4003 315 61 56 chrU 1726359 1729100 -8319937 - MICROPIA_I LTR Gypsy -1314 3162 409 6 598 272 289 64 32 chrU 1729161 1729286 -8319751 - MICROPIA_I LTR Gypsy -4309 167 39 6 598 409 319 0 0 chrU 1729298 1729489 -8319548 - Gypsy5_I LTR Gypsy -5777 732 542 6 598 234 231 0 0 chrU 1730004 1730069 -8318968 + T-rich Low_complexity Low_complexity 1 65 0 6 598 265 138 0 44 chrU 1730152 1730220 -8318817 + T-rich Low_complexity Low_complexity 2 66 0 6 598 23 0 0 0 chrU 1730724 1730747 -8318290 + AT_rich Low_complexity Low_complexity 1 23 0 6 598 24 0 0 0 chrU 1732066 1732090 -8316947 + AT_rich Low_complexity Low_complexity 1 24 0 6 598 2981 119 35 26 chrU 1732163 1732732 -8316305 - Gypsy11_I LTR Gypsy -2057 1467 894 6 598 411 319 0 0 chrU 1733556 1733747 -8315290 - Gypsy5_I LTR Gypsy -5777 732 542 6 598 234 231 0 0 chrU 1734262 1734327 -8314710 + T-rich Low_complexity Low_complexity 1 65 0 6 598 265 138 0 44 chrU 1734410 1734478 -8314559 + T-rich Low_complexity Low_complexity 2 66 0 6 598 23 0 0 0 chrU 1734980 1735003 -8314034 + AT_rich Low_complexity Low_complexity 1 23 0 6 598 24 0 0 0 chrU 1736303 1736327 -8312710 + AT_rich Low_complexity Low_complexity 1 24 0 6 598 2981 119 35 26 chrU 1736400 1736969 -8312068 - Gypsy11_I LTR Gypsy -2057 1467 894 6 598 411 319 0 0 chrU 1737793 1737984 -8311053 - Gypsy5_I LTR Gypsy -5777 732 542 6 598 234 231 0 0 chrU 1738499 1738564 -8310473 + T-rich Low_complexity Low_complexity 1 65 0 6 598 265 138 0 44 chrU 1738647 1738715 -8310322 + T-rich Low_complexity Low_complexity 2 66 0 6 598 23 0 0 0 chrU 1739217 1739240 -8309797 + AT_rich Low_complexity Low_complexity 1 23 0 6 598 24 0 0 0 chrU 1740558 1740582 -8308455 + AT_rich Low_complexity Low_complexity 1 24 0 6 598 1140 322 36 37 chrU 1741139 1741877 -8307160 - Copia2_I LTR Copia -1948 2214 1386 6 598 363 346 37 58 chrU 1742617 1743137 -8305900 - Copia2_I LTR Copia -3482 680 146 6 598 579 15 0 0 chrU 1743514 1743582 -8305455 + (TTA)n Simple_repeat Simple_repeat 3 70 0 6 598 218 196 0 0 chrU 1743582 1743684 -8305353 + (TA)n Simple_repeat Simple_repeat 1 102 0 6 598 255 258 0 0 chrU 1743787 1743849 -8305188 - Transib5 DNA Transib -1646 1355 1294 6 598 473 323 30 43 chrU 1744612 1744935 -8304102 + Gypsy5_I LTR Gypsy 2359 2635 -3874 6 598 1172 184 35 42 chrU 1745450 1745746 -8303291 - Gypsy5_LTR LTR Gypsy -141 289 10 6 598 12546 168 53 8 chrU 1745753 1750147 -8298890 - Gypsy5_I LTR Gypsy -4 6505 1913 6 598 41 21 0 0 chrU 1750353 1750401 -8298636 + AT_rich Low_complexity Low_complexity 1 48 0 6 598 829 28 0 19 chrU 1750993 1751101 -8297936 + DMCR1A LINE CR1 1 106 -4364 6 598 9225 36 23 3 chrU 1751106 1752229 -8296808 + DMCR1A LINE CR1 258 1403 -3067 6 598 9739 30 17 20 chrU 1752249 1753455 -8295582 + DMCR1A LINE CR1 2915 4117 -353 6 598 1067 71 184 23 chrU 1753454 1753628 -8295409 + DMCR1A LINE CR1 4269 4470 0 6 598 722 305 57 11 chrU 1754166 1754534 -8294503 - NOMAD_I LTR Gypsy -2792 3780 3396 6 598 566 268 94 30 chrU 1754633 1754868 -8294169 - NOMAD_I LTR Gypsy -4853 1719 1470 6 598 1433 167 141 29 chrU 1755299 1755675 -8293362 - QUASIMODO_LTR LTR Gypsy -29 629 212 6 598 21 0 0 0 chrU 1755833 1755854 -8293183 + AT_rich Low_complexity Low_complexity 1 21 0 6 598 335 307 40 38 chrU 1756193 1756734 -8292303 + MICROPIA_I LTR Gypsy 144 734 -1679 6 598 1469 329 40 24 chrU 1756876 1757862 -8291175 + MICROPIA_I LTR Gypsy 943 1943 -2156 6 598 42949 3 0 0 chrU 1757866 1762577 -8286460 + BS2 LINE Jockey 11 4721 0 6 598 207 0 0 0 chrU 1762583 1762606 -8286431 + (A)n Simple_repeat Simple_repeat 1 23 0 6 598 2535 331 35 18 chrU 1762613 1764578 -8284459 + MICROPIA_I LTR Gypsy 1934 3874 -602 6 598 1125 84 0 0 chrU 1765128 1765306 -8283731 + S_DM DNA Tc1 1559 1736 0 6 598 22 0 0 0 chrU 1766317 1766339 -8282698 + AT_rich Low_complexity Low_complexity 1 22 0 6 598 1180 129 9 50 chrU 1767067 1767287 -8281750 - QUASIMODO_LTR LTR Gypsy -447 211 1 6 598 11598 16 0 1 chrU 1767890 1769221 -8279816 - FW_DM LINE Jockey 0 4692 3363 6 598 1433 12 0 0 chrU 1769222 1769387 -8279650 - FW_DM LINE Jockey -1507 3185 3021 6 598 17763 21 21 0 chrU 1769403 1771495 -8277542 - FW_DM LINE Jockey -2538 2154 18 6 598 234 139 49 37 chrU 1771549 1771631 -8277406 + (TTAA)n Simple_repeat Simple_repeat 1 83 0 6 598 224 30 30 0 chrU 1772100 1772133 -8276904 + (TTAA)n Simple_repeat Simple_repeat 4 37 0 6 598 1191 55 0 139 chrU 1772472 1772681 -8276356 - QUASIMODO_LTR LTR Gypsy 0 658 479 6 598 660 23 35 0 chrU 1772668 1772754 -8276283 - QUASIMODO_I LTR Gypsy -1079 4981 4893 6 598 16618 68 0 4 chrU 1772742 1775008 -8274029 - I_DM LINE I -751 5480 3225 6 598 13157 59 10 9 chrU 1775007 1776853 -8272184 - I_DM LINE I -4295 1936 88 6 598 8566 46 16 28 chrU 1776840 1778044 -8270993 - QUASIMODO_I LTR Gypsy -1153 4907 3719 6 598 29711 8 1 5 chrU 1778065 1781497 -8267540 - QUASIMODO_I LTR Gypsy -2643 3417 1 6 598 5878 3 1 0 chrU 1781497 1782154 -8266883 - QUASIMODO_LTR LTR Gypsy 0 658 1 6 598 34719 11 31 2 chrU 1782154 1786388 -8262649 - QUASIMODO_I LTR Gypsy 0 6060 1705 6 598 360 345 95 7 chrU 1786638 1786933 -8262104 - BLASTOPIA_I LTR Gypsy -1 4480 4160 6 598 2514 24 0 0 chrU 1787836 1788123 -8260914 - Gypsy4_LTR LTR Gypsy 0 287 1 6 598 36258 8 25 0 chrU 1788123 1794259 -8254778 - Gypsy4_I LTR Gypsy 0 6288 1 6 598 2550 17 0 0 chrU 1794259 1794546 -8254491 - Gypsy4_LTR LTR Gypsy 0 287 1 6 598 1139 8 0 0 chrU 1796725 1796858 -8252179 - QUASIMODO_I LTR Gypsy -4361 1699 1567 6 598 6332 101 48 52 chrU 1796859 1798016 -8251021 - PROTOP_B DNA P 0 1153 1 6 598 1080 15 0 0 chrU 1798016 1798146 -8250891 - QUASIMODO_I LTR Gypsy -4488 1572 1443 6 598 16261 1 0 0 chrU 1798246 1800047 -8248990 - DOC LINE Jockey -2924 1801 1 6 598 3921 18 9 2 chrU 1800046 1800502 -8248535 - CIRCE LINE Composite -2863 3493 3035 6 598 4741 56 80 24 chrU 1800503 1801177 -8247860 - CIRCE LINE Composite -3442 2914 2203 6 598 3628 34 26 24 chrU 1801206 1801660 -8247377 - CIRCE LINE Composite -4474 1882 1428 6 598 676 92 20 10 chrU 1801660 1801759 -8247278 + STALKER4_LTR LTR Gypsy 280 379 -23 6 598 25 0 0 0 chrU 1801873 1801898 -8247139 + AT_rich Low_complexity Low_complexity 1 25 0 6 598 2325 183 53 27 chrU 1801922 1802458 -8246579 + Stalker2_I LTR Gypsy 291 840 -6562 6 598 3753 12 2 0 chrU 1802458 1802880 -8246157 + Invader1_LTR LTR Gypsy 1 423 0 6 598 26295 9 13 0 chrU 1802880 1805810 -8243227 + Invader1_I LTR Gypsy 1 2967 -219 6 598 13053 72 10 4 chrU 1805830 1807913 -8241124 + STALKER4_I LTR Gypsy 3329 5452 -1445 6 598 2083 249 0 0 chrU 1807900 1808372 -8240665 - HMSBEAGLE_I LTR Gypsy -2699 3830 3359 6 598 8918 23 26 0 chrU 1808372 1809449 -8239588 + PROTOP_A DNA P 1 1105 0 6 598 914 278 4 4 chrU 1809451 1809715 -8239322 - HMSBEAGLE_I LTR Gypsy -3166 3363 3100 6 598 3216 6 0 0 chrU 1809863 1810216 -8238821 + Gypsy2_LTR LTR Gypsy 1 353 0 6 598 56509 0 0 0 chrU 1810216 1816351 -8232686 + Gypsy2_I LTR Gypsy 1 6135 0 6 598 3255 0 0 0 chrU 1816351 1816704 -8232333 + Gypsy2_LTR LTR Gypsy 1 353 0 6 598 544 312 21 45 chrU 1816734 1817023 -8232014 - HMSBEAGLE_I LTR Gypsy -3604 2925 2644 6 598 1947 323 25 32 chrU 1817285 1818292 -8230745 - HMSBEAGLE_I LTR Gypsy -4090 2439 1440 6 598 25 83 0 0 chrU 1818985 1819045 -8229992 + AT_rich Low_complexity Low_complexity 1 60 0 6 598 454 225 70 85 chrU 1819073 1819272 -8229765 - HMSBEAGLE_I LTR Gypsy -6110 419 224 6 598 33 109 0 0 chrU 1820248 1820386 -8228651 + AT_rich Low_complexity Low_complexity 1 138 0 6 598 201 114 22 22 chrU 1820393 1820438 -8228599 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 6 598 303 226 35 23 chrU 1820715 1820801 -8228236 + ACCORD2_I LTR Gypsy 2451 2537 -4675 6 598 235 345 28 35 chrU 1820975 1821119 -8227918 + Gypsy5_I LTR Gypsy 902 1044 -5465 6 598 49204 14 10 5 chrU 1821320 1827138 -8221899 - ROO_I LTR Pao -2408 5848 1 6 598 3638 30 2 2 chrU 1827138 1827566 -8221471 - ROO_LTR LTR Pao 0 428 1 6 598 3909 304 46 47 chrU 1828115 1830859 -8218178 + ZAM_I LTR Gypsy 3132 5872 -1618 6 598 180 0 0 0 chrU 1830946 1830966 -8218071 + (TAA)n Simple_repeat Simple_repeat 2 21 0 6 598 29 28 0 0 chrU 1831297 1831333 -8217704 + AT_rich Low_complexity Low_complexity 1 36 0 6 598 26 30 0 0 chrU 1832026 1832059 -8216978 + AT_rich Low_complexity Low_complexity 1 33 0 6 598 304 89 0 22 chrU 1832142 1832188 -8216849 + DM297_I LTR Gypsy 2 46 -6121 6 598 3281 78 16 4 chrU 1832188 1832638 -8216399 - Mariner2_DM DNA Tc1 -18 894 440 6 598 209 241 38 12 chrU 1832689 1832769 -8216268 + A-rich Low_complexity Low_complexity 6 87 0 6 598 2248 177 41 19 chrU 1832901 1833368 -8215669 + DM297_I LTR Gypsy 340 816 -5351 6 598 1672 47 142 0 chrU 1833366 1833682 -8215355 + DMCR1A LINE CR1 4110 4470 0 6 598 1201 154 160 7 chrU 1833687 1833987 -8215050 + DM297_I LTR Gypsy 822 1167 -5000 6 598 3187 131 197 15 chrU 1833979 1834830 -8214207 + DM297_I LTR Gypsy 1560 2565 -3602 6 598 28 0 0 0 chrU 1834862 1834890 -8214147 + AT_rich Low_complexity Low_complexity 1 28 0 6 74 430 163 10 61 chrU 1834930 1835028 -8214009 - MDG1_I LTR Gypsy -5579 1017 925 6 599 3475 39 57 4 chrU 1835028 1835840 -8213197 - PROTOP DNA P -371 4109 3589 6 599 3390 42 19 5 chrU 1835820 1836247 -8212790 - PROTOP DNA P -2878 1602 1170 6 599 7596 32 7 3 chrU 1836240 1837198 -8211839 - PROTOP DNA P -3450 1030 69 6 599 9221 24 6 0 chrU 1837198 1838296 -8210741 + PROTOP_A DNA P 1 1105 0 6 599 665 27 0 0 chrU 1838296 1838371 -8210666 - PROTOP_A DNA P -1030 75 1 6 599 298 156 38 25 chrU 1838371 1838447 -8210590 - MDG1_I LTR Gypsy -5665 931 855 6 599 23 68 0 0 chrU 1838664 1838708 -8210329 + AT_rich Low_complexity Low_complexity 1 44 0 6 599 1489 117 352 3 chrU 1839891 1840214 -8208823 + DNAREP1_DM LINE Penelope 160 594 0 6 599 345 164 0 0 chrU 1840249 1840304 -8208733 + DMCR1A LINE CR1 4415 4469 -1 6 599 29 0 0 0 chrU 1841296 1841325 -8207712 + AT_rich Low_complexity Low_complexity 1 29 0 6 599 23 0 0 0 chrU 1841733 1841756 -8207281 + AT_rich Low_complexity Low_complexity 1 23 0 6 599 28 71 0 0 chrU 1842321 1842377 -8206660 + AT_rich Low_complexity Low_complexity 1 56 0 6 599 1248 74 343 0 chrU 1842503 1842728 -8206309 + PROTOP DNA P 1 302 -4178 6 599 266 262 0 48 chrU 1842767 1842851 -8206186 + PROTOP DNA P 451 530 -3950 6 599 404 186 157 0 chrU 1842842 1842944 -8206093 + PROTOP DNA P 1468 1585 -2895 6 599 404 122 70 11 chrU 1843022 1843137 -8205900 - Rehavkus-1_DY DNA Tc1 0 5919 5728 6 599 266 171 0 0 chrU 1843133 1843174 -8205863 - Gypsy6_I LTR Gypsy -212 6800 6760 6 599 389 232 119 4 chrU 1843782 1843911 -8205126 - QUASIMODO_I LTR Gypsy -3055 3005 2913 6 599 850 117 492 64 chrU 1843977 1844243 -8204794 - DNAREP1_DM LINE Penelope -12 582 203 6 599 1175 26 0 0 chrU 1844257 1844409 -8204628 - DMCR1A LINE CR1 -133 4337 4186 6 599 681 141 94 26 chrU 1844414 1844620 -8204417 - DNAREP1_DM LINE Penelope -290 304 88 6 599 52 30 0 0 chrU 1846329 1846395 -8202642 + AT_rich Low_complexity Low_complexity 1 66 0 6 599 2224 55 30 10 chrU 1846730 1847026 -8202011 + PROTOP DNA P 1 302 -4178 6 599 266 262 0 48 chrU 1847065 1847149 -8201888 + PROTOP DNA P 451 530 -3950 6 599 404 186 157 0 chrU 1847140 1847242 -8201795 + PROTOP DNA P 1468 1585 -2895 6 599 404 122 70 11 chrU 1847320 1847435 -8201602 - Rehavkus-1_DY DNA Tc1 0 5800 5728 6 599 266 171 0 0 chrU 1847431 1847472 -8201565 - Gypsy6_I LTR Gypsy -212 6800 6760 6 599 389 232 119 4 chrU 1848109 1848238 -8200799 - QUASIMODO_I LTR Gypsy -3055 3005 2913 6 599 850 117 492 64 chrU 1848304 1848570 -8200467 - DNAREP1_DM LINE Penelope -12 582 203 6 599 1175 26 0 0 chrU 1848584 1848736 -8200301 - DMCR1A LINE CR1 -133 4337 4186 6 599 681 141 94 26 chrU 1848741 1848947 -8200090 - DNAREP1_DM LINE Penelope -290 304 88 6 599 52 30 0 0 chrU 1850656 1850722 -8198315 + AT_rich Low_complexity Low_complexity 1 66 0 6 599 2224 55 30 10 chrU 1851056 1851352 -8197685 + PROTOP DNA P 1 302 -4178 6 599 266 262 0 48 chrU 1851391 1851475 -8197562 + PROTOP DNA P 451 530 -3950 6 599 404 186 157 0 chrU 1851466 1851568 -8197469 + PROTOP DNA P 1468 1585 -2895 6 599 404 122 70 11 chrU 1851646 1851761 -8197276 - Rehavkus-1_DY DNA Tc1 0 5800 5728 6 599 266 171 0 0 chrU 1851757 1851798 -8197239 - Gypsy6_I LTR Gypsy -212 6800 6760 6 599 389 238 47 3 chrU 1852397 1852558 -8196479 - QUASIMODO_I LTR Gypsy -3055 3005 2913 6 599 833 121 492 64 chrU 1852601 1852867 -8196170 - DNAREP1_DM LINE Penelope -12 582 203 6 599 1175 26 0 0 chrU 1852881 1853033 -8196004 - DMCR1A LINE CR1 -133 4337 4186 6 599 653 135 113 26 chrU 1853038 1853244 -8195793 - DNAREP1_DM LINE Penelope -307 287 88 6 599 52 30 0 0 chrU 1854953 1855019 -8194018 + AT_rich Low_complexity Low_complexity 1 66 0 6 599 4128 29 39 6 chrU 1855353 1855869 -8193168 + PROTOP DNA P 1 533 -3947 6 599 419 118 0 0 chrU 1855931 1855999 -8193038 - IDEFIX_LTR LTR Gypsy -524 70 3 6 599 3889 153 59 8 chrU 1855997 1857099 -8191938 - IDEFIX_I LTR Gypsy 0 5628 4339 6 599 1137 92 0 24 chrU 1857082 1857249 -8191788 - IDEFIX_I LTR Gypsy -4093 1535 1373 6 599 5060 205 52 3 chrU 1857276 1858364 -8190673 - IDEFIX_I LTR Gypsy -4462 1166 25 6 599 996 141 158 108 chrU 1858369 1858648 -8190389 - IDEFIX_LTR LTR Gypsy -301 293 1 6 599 222 37 0 0 chrU 1858648 1858675 -8190362 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 599 1410 122 18 9 chrU 1858675 1858898 -8190139 - DNAREP1_DM LINE Penelope -116 478 254 6 599 1717 137 16 3 chrU 1858906 1859213 -8189824 - DNAREP1_DM LINE Penelope -282 312 2 6 599 10578 35 14 6 chrU 1859261 1860535 -8188502 - G5A_DM LINE Jockey 0 2841 1558 6 599 11190 236 56 8 chrU 1860532 1863159 -8185878 - G5_DM LINE Jockey -1385 3471 721 6 599 323 257 69 35 chrU 1863161 1863306 -8185731 - G5_DM LINE Jockey -4300 556 407 6 599 23 33 0 0 chrU 1863314 1863344 -8185693 + AT_rich Low_complexity Low_complexity 1 30 0 6 599 3326 112 50 54 chrU 1863425 1864020 -8185017 - DNAREP1_DM LINE Penelope 0 594 2 6 599 246 294 108 0 chrU 1864045 1864147 -8184890 - TOM_I LTR Gypsy -1689 4423 4311 6 599 401 69 121 0 chrU 1864147 1864205 -8184832 - DNAREP1_DM LINE Penelope -3 591 527 6 599 990 148 61 14 chrU 1864221 1864433 -8184604 - IDEFIX_LTR LTR Gypsy 0 594 373 6 599 839 168 6 53 chrU 1864416 1864586 -8184451 - IDEFIX_LTR LTR Gypsy -351 243 82 6 599 331 236 11 11 chrU 1864592 1864686 -8184351 - IDEFIX_LTR LTR Gypsy -489 105 12 6 599 226 235 0 0 chrU 1867298 1867349 -8181688 + ACCORD_I LTR Gypsy 3251 3301 -2987 6 599 226 311 9 9 chrU 1867638 1867745 -8181292 + BLASTOPIA_I LTR Gypsy 2627 2733 -1748 6 599 1567 49 134 0 chrU 1869394 1869715 -8179322 - Gypsy10_LTR LTR Gypsy 0 364 1 6 599 596 36 0 98 chrU 1869715 1869807 -8179230 - Gypsy10_I LTR Gypsy 0 5278 5196 6 599 6899 174 41 37 chrU 1869886 1871984 -8177053 - Gypsy10_I LTR Gypsy -195 6093 3383 6 599 194 57 0 54 chrU 1871984 1872021 -8177016 + (TAG)n Simple_repeat Simple_repeat 2 36 0 6 599 15868 123 29 17 chrU 1872021 1875387 -8173650 - Gypsy10_I LTR Gypsy -2439 3738 560 6 599 3000 41 0 0 chrU 1875387 1875751 -8173286 - Gypsy10_LTR LTR Gypsy 0 364 1 6 599 1276 138 58 4 chrU 1875751 1875976 -8173061 - DNAREP1_DM LINE Penelope -104 490 254 6 599 1460 139 86 10 chrU 1875984 1876274 -8172763 - DNAREP1_DM LINE Penelope -282 312 1 6 599 5233 220 21 2 chrU 1876289 1877407 -8171630 + TOM_I LTR Gypsy 2135 3273 -2839 6 599 12972 71 3 2 chrU 1877407 1879141 -8169896 - S_DM DNA Tc1 0 1736 1 6 599 3342 217 51 12 chrU 1879226 1880053 -8168984 + DM297_I LTR Gypsy 3450 4308 -1859 6 599 5942 98 47 6 chrU 1880061 1880956 -8168081 - FB4_DM DNA Tc1 -1708 2381 1450 6 599 3523 5 7 7 chrU 1880972 1881386 -8167651 - DM297_LTR LTR Gypsy 0 414 1 6 599 4741 15 0 0 chrU 1881386 1881972 -8167065 - DM297_I LTR Gypsy 0 6167 5582 6 599 40717 8 0 1 chrU 1881960 1886692 -8162345 - DM297_I LTR Gypsy -1436 4731 1 6 599 3025 6 8 8 chrU 1886692 1887052 -8161985 - DM297_LTR LTR Gypsy 0 414 55 6 599 1918 302 32 45 chrU 1892288 1893425 -8155612 - ROVER-I_DM LTR Gypsy -4702 1882 416 6 599 20287 31 11 3 chrU 1893535 1896225 -8152812 + IDEFIX_I LTR Gypsy 2917 5628 0 6 599 4837 17 2 0 chrU 1896225 1896818 -8152219 + IDEFIX_LTR LTR Gypsy 1 594 0 6 599 25 0 0 0 chrU 1897008 1897033 -8152004 + AT_rich Low_complexity Low_complexity 1 25 0 6 599 3793 29 0 4 chrU 1897454 1897942 -8151095 + IDEFIX_I LTR Gypsy 1 486 -5142 6 599 34369 30 36 3 chrU 1897953 1902818 -8146219 + IDEFIX_I LTR Gypsy 606 5628 0 6 599 4777 20 2 0 chrU 1902818 1903411 -8145626 + IDEFIX_LTR LTR Gypsy 1 594 0 6 599 4961 86 38 86 chrU 1903411 1904314 -8144723 - CIRCE LINE Composite -1981 4375 3517 6 599 812 94 217 6 chrU 1904314 1904475 -8144562 + DNAREP1_DM LINE Penelope 400 594 0 6 599 2051 11 26 11 chrU 1904971 1905242 -8143795 - BLASTOPIA_LTR LTR Gypsy 0 275 1 6 599 38986 1 1 0 chrU 1905242 1909719 -8139318 - BLASTOPIA_I LTR Gypsy 0 4481 1 6 599 2051 11 26 11 chrU 1909719 1909990 -8139047 - BLASTOPIA_LTR LTR Gypsy 0 275 1 6 599 1619 40 44 0 chrU 1911372 1911598 -8137439 - PROTOP DNA P -493 3987 3752 6 599 787 59 0 0 chrU 1911598 1911700 -8137337 - PROTOP DNA P -3953 527 426 6 599 397 75 0 0 chrU 1911721 1911774 -8137263 - PROTOP DNA P -4246 234 182 6 599 1983 62 29 0 chrU 1911774 1912047 -8136990 + Gypsy6A_LTR LTR Gypsy 1 281 -139 6 599 4499 71 38 1 chrU 1912089 1912755 -8136282 + ZAM_I LTR Gypsy 3226 3915 -3575 6 599 12467 274 64 33 chrU 1912754 1917821 -8131216 + Gypsy6_I LTR Gypsy 1203 6840 -172 6 599 2385 66 138 0 chrU 1917854 1918216 -8130821 + Gypsy6A_LTR LTR Gypsy 9 420 0 6 599 533 87 54 0 chrU 1918229 1918321 -8130716 - PROTOP DNA P -4355 125 29 6 599 1411 68 169 4 chrU 1918291 1918534 -8130503 - DMTOM1_LTR LTR Gypsy -127 283 1 6 599 298 250 37 0 chrU 1918555 1918663 -8130374 - TOM_I LTR Gypsy -40 6072 5961 6 599 1240 286 86 13 chrU 1918768 1919513 -8129524 - DM176_I LTR Gypsy -339 6081 5283 6 599 4840 235 86 3 chrU 1919535 1920949 -8128088 - TOM_I LTR Gypsy -1931 4181 2652 6 599 3946 264 81 57 chrU 1920934 1923380 -8125657 - TOM_I LTR Gypsy -3606 2506 1 6 599 670 39 186 0 chrU 1923380 1923482 -8125555 - DMTOM1_LTR LTR Gypsy 0 410 290 6 599 668 154 31 63 chrU 1923497 1923656 -8125381 + Gypsy11_LTR LTR Gypsy 274 427 -25 6 599 14184 19 59 1 chrU 1925253 1927113 -8121924 - FW_DM LINE Jockey 0 4692 2725 6 599 6402 19 26 1 chrU 1927113 1928382 -8120655 - FW_DM LINE Jockey -2506 2186 886 6 599 16419 10 0 0 chrU 1928371 1930273 -8118764 + BS LINE Jockey 3225 5126 0 6 599 5219 13 0 0 chrU 1930276 1930899 -8118138 - FW_DM LINE Jockey -3796 896 274 6 599 3590 32 0 0 chrU 1930896 1931336 -8117701 - FW_DM LINE Jockey -4252 440 1 6 599 1422 115 68 48 chrU 1931373 1931684 -8117353 - DNAREP1_DM LINE Penelope -258 336 20 6 599 1596 136 220 3 chrU 1931683 1932038 -8116999 - DMCR1A LINE CR1 -3113 1357 926 6 599 249 167 0 0 chrU 1932154 1932202 -8116835 - Transib-N1_DM DNA Transib -446 68 21 6 599 5562 68 100 44 chrU 1932378 1933316 -8115721 + DOC4_DM LINE Jockey 1 979 -1812 6 599 1485 206 43 9 chrU 1933321 1933874 -8115163 + DOC4_DM LINE Jockey 2081 2294 -497 6 599 1047 23 0 0 chrU 1933884 1934016 -8115021 + DOC4_DM LINE Jockey 2562 2693 -98 6 599 300 0 0 0 chrU 1934027 1934063 -8114974 + DOC4_DM LINE Jockey 2754 2789 -2 6 599 834 10 0 0 chrU 1934124 1934224 -8114813 + ACCORD_LTR LTR Gypsy 1 100 -458 6 599 12261 75 3 2 chrU 1934224 1935958 -8113079 - S_DM DNA Tc1 0 1736 1 6 599 3911 0 11 0 chrU 1935958 1936413 -8112624 + ACCORD_LTR LTR Gypsy 99 558 0 6 599 291 147 0 42 chrU 1936481 1936552 -8112485 + DOC LINE Jockey 4625 4692 -33 6 599 25 31 0 0 chrU 1937016 1937048 -8111989 + AT_rich Low_complexity Low_complexity 1 32 0 6 599 538 51 0 48 chrU 1941134 1941217 -8107820 - G5A_DM LINE Jockey 0 2841 2763 6 599 1620 0 0 0 chrU 1941222 1942121 -8106916 + (TTCTC)n Simple_repeat Simple_repeat 1 899 0 6 599 3021 120 220 9 chrU 1942221 1943377 -8105660 - IVK_DM LINE I -4001 1401 1 6 599 25 90 0 0 chrU 1944010 1944077 -8104960 + AT_rich Low_complexity Low_complexity 1 67 0 6 599 33 66 0 0 chrU 1944580 1944641 -8104396 + AT_rich Low_complexity Low_complexity 1 61 0 6 599 2148 119 36 5 chrU 1944764 1945403 -8103634 + Gypsy3_I LTR Gypsy 5654 6177 0 6 599 2310 81 37 37 chrU 1945403 1945810 -8103227 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 599 6594 48 24 43 chrU 1945810 1946759 -8102278 + Gypsy3_I LTR Gypsy 1 931 -5246 6 599 1323 90 0 0 chrU 1946754 1946942 -8102095 - IVK_DM LINE I -1243 4159 3972 6 599 772 21 0 0 chrU 1946941 1947035 -8102002 - IVK_DM LINE I -1559 3843 3750 6 599 11534 99 116 7 chrU 1947034 1949601 -8099436 - IVK_DM LINE I -2555 2847 1 6 599 25 90 0 0 chrU 1950234 1950301 -8098736 + AT_rich Low_complexity Low_complexity 1 67 0 6 599 33 66 0 0 chrU 1950804 1950865 -8098172 + AT_rich Low_complexity Low_complexity 1 61 0 6 599 1101 322 17 0 chrU 1951173 1951655 -8097382 + Gypsy4_I LTR Gypsy 677 1166 -5122 6 599 3071 276 39 21 chrU 1951698 1953056 -8095981 + Gypsy4_I LTR Gypsy 2004 3356 -1922 6 599 453 306 0 39 chrU 1953124 1953331 -8095706 + Gypsy4_I LTR Gypsy 3707 3905 -2383 6 599 1194 304 21 9 chrU 1953377 1953941 -8095096 + Gypsy4_I LTR Gypsy 4175 4745 -1543 6 599 480 331 36 34 chrU 1954024 1954496 -8094541 + Gypsy4_I LTR Gypsy 4914 5386 -902 6 599 341 354 20 36 chrU 1954521 1954955 -8094082 + Gypsy4_I LTR Gypsy 5489 5835 -453 6 599 1566 176 49 101 chrU 1955955 1956448 -8092589 - DNAREP1_DM LINE Penelope 0 594 128 6 599 707 168 19 0 chrU 1956423 1956578 -8092459 - DNAREP1_DM LINE Penelope -355 239 82 6 599 2406 125 122 3 chrU 1956993 1957609 -8091428 + DMCR1A LINE CR1 3368 4056 -414 6 599 225 143 102 51 chrU 1957622 1957681 -8091356 + DMCR1A LINE CR1 4127 4188 -282 6 599 32 26 0 0 chrU 1957715 1957754 -8091283 + AT_rich Low_complexity Low_complexity 1 39 0 6 599 1218 98 237 0 chrU 1957754 1957990 -8091047 - DNAREP1_DM LINE Penelope -29 565 274 6 599 31 44 0 0 chrU 1958320 1958365 -8090672 + AT_rich Low_complexity Low_complexity 1 45 0 6 599 1269 124 72 28 chrU 1958525 1958955 -8090082 + DNAREP1_DM LINE Penelope 117 594 0 6 599 257 346 23 46 chrU 1959256 1959562 -8089475 + Gypsy10_I LTR Gypsy 4749 5047 -231 6 599 1633 159 33 70 chrU 1960562 1961226 -8087811 - DNAREP1_DM LINE Penelope 0 594 82 6 599 2406 125 122 3 chrU 1961641 1962257 -8086780 + DMCR1A LINE CR1 3368 4056 -414 6 599 225 143 102 51 chrU 1962270 1962329 -8086708 + DMCR1A LINE CR1 4127 4188 -282 6 599 32 26 0 0 chrU 1962363 1962402 -8086635 + AT_rich Low_complexity Low_complexity 1 39 0 6 599 1218 98 237 0 chrU 1962402 1962638 -8086399 - DNAREP1_DM LINE Penelope -29 565 274 6 599 31 44 0 0 chrU 1962968 1963013 -8086024 + AT_rich Low_complexity Low_complexity 1 45 0 6 599 1303 124 70 25 chrU 1963172 1963600 -8085437 + DNAREP1_DM LINE Penelope 126 594 0 6 599 242 132 0 0 chrU 1964073 1964111 -8084926 + STALKER4_I LTR Gypsy 2111 2148 -4382 6 599 337 260 47 0 chrU 1964152 1964279 -8084758 + STALKER4_I LTR Gypsy 2258 2390 -4140 6 599 454 90 3 11 chrU 1964398 1964479 -8084558 - BS2 LINE Jockey 0 4721 4659 6 74 8515 141 72 15 chrU 1964746 1966298 -8082739 - HMSBEAGLE_I LTR Gypsy -3501 3028 1388 6 600 1320 60 8 5 chrU 1966296 1966492 -8082545 - BS2 LINE Jockey 0 4721 4543 6 600 9487 58 108 2 chrU 1966491 1968548 -8080489 - BS2 LINE Jockey -483 4238 1964 6 600 317 25 0 0 chrU 1968547 1968587 -8080450 - BS2 LINE Jockey -3838 883 844 6 600 2997 93 19 27 chrU 1968589 1969066 -8079971 - BS2 LINE Jockey -4238 483 11 6 600 461 242 176 9 chrU 1970006 1970227 -8078810 + STALKER4_I LTR Gypsy 2111 2368 -4162 6 600 631 114 30 8 chrU 1970439 1970571 -8078466 - STALKER4_LTR LTR Gypsy -267 135 1 6 600 1854 89 0 25 chrU 1970571 1970848 -8078189 + DMCR1A LINE CR1 3503 3772 -698 6 600 1825 63 113 29 chrU 1970857 1971166 -8077871 + DMCR1A LINE CR1 4098 4432 -38 6 600 241 159 31 31 chrU 1971190 1971255 -8077782 - STALKER4_I LTR Gypsy 0 6530 6466 6 600 22 0 0 0 chrU 1971257 1971279 -8077758 + AT_rich Low_complexity Low_complexity 1 22 0 6 600 1099 137 79 6 chrU 1971290 1971569 -8077468 - STALKER4_I LTR Gypsy -252 6278 6064 6 600 299 185 0 58 chrU 1972004 1972090 -8076947 + Gypsy8_I LTR Gypsy 3340 3420 -927 6 600 1317 221 15 117 chrU 1972095 1972633 -8076404 + Gypsy8_I LTR Gypsy 3719 4201 -146 6 600 225 146 18 18 chrU 1972840 1972896 -8076141 + Gypsy8_LTR LTR Gypsy 1 56 -248 6 600 1182 154 201 35 chrU 1973359 1973823 -8075214 + Gypsy8_I LTR Gypsy 230 770 -3577 6 600 251 325 24 0 chrU 1973956 1974082 -8074955 + OSVALDO_I LTR Gypsy 1914 2042 -4611 6 600 480 268 0 0 chrU 1974089 1974212 -8074825 + OSVALDO_I LTR Gypsy 2230 2352 -4301 6 600 271 203 16 0 chrU 1974231 1974295 -8074742 + Gypsy8_I LTR Gypsy 2389 2453 -1894 6 600 1457 158 31 118 chrU 1974601 1975024 -8074013 + Gypsy8_I LTR Gypsy 2451 2836 -1511 6 600 1531 111 124 170 chrU 1975439 1975939 -8073098 - DNAREP1_DM LINE Penelope -117 477 1 6 600 241 269 87 29 chrU 1976010 1976148 -8072889 + Gypsy8_LTR LTR Gypsy 1 146 -158 6 600 4774 89 90 3 chrU 1976155 1976900 -8072137 + R1_DM LINE R1 4538 5347 -9 6 600 264 182 18 0 chrU 1976965 1977020 -8072017 - DNAREP1_DM LINE Penelope -496 98 43 6 600 1047 325 94 28 chrU 1977442 1978356 -8070681 - OSVALDO_I LTR Gypsy -2376 4277 3304 6 600 275 154 14 58 chrU 1978663 1978732 -8070305 + ZAM_LTR LTR Gypsy 55 120 -352 6 600 400 233 461 17 chrU 1978745 1978923 -8070114 + ZAM_LTR LTR Gypsy 93 349 -123 6 600 581 154 35 42 chrU 1979046 1979188 -8069849 + ZAM_I LTR Gypsy 1 141 -7349 6 600 621 219 132 64 chrU 1979834 1980191 -8068846 + ZAM_I LTR Gypsy 215 595 -6895 6 600 1041 113 97 0 chrU 1980188 1980373 -8068664 + ZAM_I LTR Gypsy 1626 1828 -5662 6 600 1150 165 229 31 chrU 1980367 1980717 -8068320 + ZAM_I LTR Gypsy 1958 2376 -5114 6 600 464 98 49 0 chrU 1980696 1980778 -8068259 + ZAM_I LTR Gypsy 3250 3335 -4155 6 600 311 101 416 0 chrU 1980788 1980877 -8068160 + ZAM_I LTR Gypsy 4228 4353 -3137 6 600 2274 11 0 0 chrU 1980877 1981143 -8067894 - Invader2_LTR LTR Gypsy 0 266 1 6 600 37654 9 4 0 chrU 1981143 1985717 -8063320 - Invader2_I LTR Gypsy 0 4592 1 6 600 2260 15 0 0 chrU 1985717 1985983 -8063054 - Invader2_LTR LTR Gypsy 0 266 1 6 600 17858 8 11 3 chrU 1985983 1988192 -8060845 - Invader2_I LTR Gypsy 0 4592 2366 6 600 23 68 0 0 chrU 1988349 1988393 -8060644 + AT_rich Low_complexity Low_complexity 1 44 0 6 600 841 117 0 0 chrU 1988398 1988535 -8060502 - NTS_DM Other Other -103 137 1 6 600 280 104 21 0 chrU 1988625 1988673 -8060364 - NTS_DM Other Other -191 49 1 6 600 1068 137 30 22 chrU 1988673 1988904 -8060133 - NTS_DM Other Other 0 240 8 6 600 273 125 21 0 chrU 1989002 1989050 -8059987 - NTS_DM Other Other -191 49 1 6 600 992 147 34 25 chrU 1989050 1989288 -8059749 - NTS_DM Other Other 0 240 1 6 600 291 104 21 0 chrU 1989378 1989426 -8059611 - NTS_DM Other Other -191 49 1 6 600 357 159 53 38 chrU 1989426 1989557 -8059480 - NTS_DM Other Other 0 240 108 6 600 862 109 0 0 chrU 1989565 1989702 -8059335 - NTS_DM Other Other -103 137 1 6 600 306 83 21 0 chrU 1989792 1989840 -8059197 - NTS_DM Other Other -191 49 1 6 600 357 159 53 38 chrU 1989840 1989971 -8059066 - NTS_DM Other Other 0 240 108 6 600 862 109 0 0 chrU 1989979 1990116 -8058921 - NTS_DM Other Other -103 137 1 6 600 280 104 21 0 chrU 1990206 1990254 -8058783 - NTS_DM Other Other -191 49 1 6 600 1034 143 38 21 chrU 1990254 1990490 -8058547 - NTS_DM Other Other 0 240 1 6 600 1070 128 0 5 chrU 1990707 1990904 -8058133 - NTS_DM Other Other -44 196 1 6 600 277 106 21 0 chrU 1990996 1991043 -8057994 - NTS_DM Other Other -192 48 1 6 600 1124 119 30 22 chrU 1991043 1991275 -8057762 - NTS_DM Other Other 0 240 7 6 600 13604 24 8 2 chrU 1991334 1993019 -8056018 - G2_DM LINE Jockey -7 3095 1401 6 600 280 104 21 0 chrU 1993021 1993069 -8055968 - NTS_DM Other Other -191 49 1 6 600 990 142 61 22 chrU 1993069 1993300 -8055737 - NTS_DM Other Other 0 240 1 6 600 255 146 21 0 chrU 1993383 1993431 -8055606 - NTS_DM Other Other -191 49 1 6 600 1055 133 0 5 chrU 1993521 1993718 -8055319 - NTS_DM Other Other -44 196 1 6 600 356 104 15 0 chrU 1993743 1993810 -8055227 + (TA)n Simple_repeat Simple_repeat 1 68 0 6 600 29 60 0 0 chrU 1993874 1993924 -8055113 + AT_rich Low_complexity Low_complexity 1 50 0 6 600 816 124 0 0 chrU 1993924 1994061 -8054976 - NTS_DM Other Other -103 137 1 6 600 280 104 21 0 chrU 1994151 1994199 -8054838 - NTS_DM Other Other -191 49 1 6 600 1062 150 29 21 chrU 1994199 1994437 -8054600 - NTS_DM Other Other 0 240 1 6 600 270 125 21 0 chrU 1994521 1994569 -8054468 - NTS_DM Other Other -191 49 1 6 600 1052 133 0 5 chrU 1994659 1994856 -8054181 - NTS_DM Other Other -44 196 1 6 600 280 104 21 0 chrU 1994947 1994995 -8054042 - NTS_DM Other Other -191 49 1 6 600 1068 137 30 22 chrU 1994995 1995226 -8053811 - NTS_DM Other Other 0 240 8 6 600 256 146 21 0 chrU 1995324 1995372 -8053665 - NTS_DM Other Other -191 49 1 6 600 992 147 34 25 chrU 1995372 1995610 -8053427 - NTS_DM Other Other 0 240 1 6 600 291 104 21 0 chrU 1995700 1995748 -8053289 - NTS_DM Other Other -191 49 1 6 600 357 159 53 38 chrU 1995748 1995879 -8053158 - NTS_DM Other Other 0 240 108 6 600 862 109 0 0 chrU 1995887 1996024 -8053013 - NTS_DM Other Other -103 137 1 6 600 280 104 21 0 chrU 1996114 1996162 -8052875 - NTS_DM Other Other -191 49 1 6 600 1009 147 38 21 chrU 1996162 1996398 -8052639 - NTS_DM Other Other 0 240 1 6 600 1070 128 0 5 chrU 1996615 1996812 -8052225 - NTS_DM Other Other -44 196 1 6 600 280 104 21 0 chrU 1996903 1996951 -8052086 - NTS_DM Other Other -191 49 1 6 600 666 136 43 48 chrU 1996951 1997137 -8051900 - NTS_DM Other Other 0 240 56 6 600 401 155 116 18 chrU 1997148 1997260 -8051777 - NTS_DM Other Other -117 123 1 6 600 262 125 21 0 chrU 1997327 1997375 -8051662 - NTS_DM Other Other -191 49 1 6 600 1069 132 30 22 chrU 1997375 1997607 -8051430 - NTS_DM Other Other 0 240 7 6 600 10234 70 10 10 chrU 1997666 1999330 -8049707 - G2_DM LINE Jockey 0 4346 1867 6 600 280 104 21 0 chrU 1999324 1999372 -8049665 - NTS_DM Other Other -191 49 1 6 600 990 142 61 22 chrU 1999372 1999603 -8049434 - NTS_DM Other Other 0 240 1 6 600 245 146 21 0 chrU 1999686 1999734 -8049303 - NTS_DM Other Other -191 49 1 6 600 935 114 0 6 chrU 1999824 2000000 -8049037 - NTS_DM Other Other -44 196 22 6 600 315 83 21 0 chrU 2000112 2000160 -8048877 - NTS_DM Other Other -191 49 1 6 600 1085 146 29 21 chrU 2000160 2000398 -8048639 - NTS_DM Other Other 0 240 1 6 600 522 146 0 49 chrU 2000600 2000744 -8048293 - NTS_DM Other Other -48 192 56 6 600 742 122 34 0 chrU 2000757 2000904 -8048133 - NTS_DM Other Other -88 152 1 6 600 1111 133 29 21 chrU 2001012 2001250 -8047787 - NTS_DM Other Other 0 240 1 6 600 572 160 44 28 chrU 2001327 2001507 -8047530 - NTS_DM Other Other 0 240 58 6 600 887 108 27 0 chrU 2001523 2001671 -8047366 - NTS_DM Other Other -88 152 1 6 600 754 125 39 28 chrU 2001900 2002081 -8046956 - NTS_DM Other Other 0 240 58 6 600 957 99 0 0 chrU 2002097 2002248 -8046789 - NTS_DM Other Other -88 152 2 6 600 790 152 35 25 chrU 2002387 2002589 -8046448 - NTS_DM Other Other 0 240 37 6 600 8439 20 37 1 chrU 2002593 2003660 -8045377 + PROTOP_A DNA P 1 1105 0 6 600 290 104 21 0 chrU 2003789 2003837 -8045200 - NTS_DM Other Other -191 49 1 6 600 1063 158 25 17 chrU 2003837 2004075 -8044962 - NTS_DM Other Other 0 240 1 6 600 563 166 44 28 chrU 2004172 2004352 -8044685 - NTS_DM Other Other 0 240 58 6 600 238 214 18 0 chrU 2004528 2004584 -8044453 - NTS_DM Other Other -183 57 1 6 600 1121 129 30 21 chrU 2004584 2004821 -8044216 - NTS_DM Other Other 0 240 2 6 600 239 146 21 0 chrU 2004912 2004960 -8044077 - NTS_DM Other Other -191 49 1 6 600 1073 146 29 21 chrU 2004960 2005198 -8043839 - NTS_DM Other Other 0 240 1 6 600 249 125 20 20 chrU 2005248 2005297 -8043740 - NTS_DM Other Other -191 49 1 6 600 665 148 44 28 chrU 2005297 2005477 -8043560 - NTS_DM Other Other 0 240 58 6 600 835 144 7 0 chrU 2005491 2005644 -8043393 - NTS_DM Other Other -86 154 1 6 600 290 104 21 0 chrU 2005734 2005782 -8043255 - NTS_DM Other Other -191 49 1 6 600 678 143 44 28 chrU 2005782 2005962 -8043075 - NTS_DM Other Other 0 240 58 6 600 953 111 0 0 chrU 2005976 2006129 -8042908 - NTS_DM Other Other -86 154 2 6 600 239 146 21 0 chrU 2006220 2006268 -8042769 - NTS_DM Other Other -191 49 1 6 600 1073 146 29 21 chrU 2006268 2006506 -8042531 - NTS_DM Other Other 0 240 1 6 600 249 125 20 20 chrU 2006556 2006605 -8042432 - NTS_DM Other Other -191 49 1 6 600 680 143 44 28 chrU 2006605 2006785 -8042252 - NTS_DM Other Other 0 240 58 6 600 871 143 0 0 chrU 2006799 2006953 -8042084 - NTS_DM Other Other -86 154 1 6 600 290 104 21 0 chrU 2007043 2007091 -8041946 - NTS_DM Other Other -191 49 1 6 600 675 148 44 28 chrU 2007091 2007271 -8041766 - NTS_DM Other Other 0 240 58 6 600 606 90 0 0 chrU 2007285 2007385 -8041652 - NTS_DM Other Other -86 154 55 6 600 279 125 21 0 chrU 2007470 2007518 -8041519 - NTS_DM Other Other -191 49 1 6 600 556 183 44 28 chrU 2007518 2007698 -8041339 - NTS_DM Other Other 0 240 58 6 600 928 130 0 0 chrU 2007712 2007866 -8041171 - NTS_DM Other Other -86 154 1 6 600 255 196 18 0 chrU 2007940 2007996 -8041041 - NTS_DM Other Other -183 57 1 6 600 1028 147 34 21 chrU 2007996 2008233 -8040804 - NTS_DM Other Other 0 240 1 6 600 263 125 21 0 chrU 2008324 2008372 -8040665 - NTS_DM Other Other -191 49 1 6 600 707 137 44 28 chrU 2008372 2008552 -8040485 - NTS_DM Other Other 0 240 58 6 600 583 100 0 0 chrU 2008566 2008666 -8040371 - NTS_DM Other Other -86 154 55 6 600 285 104 21 0 chrU 2008751 2008799 -8040238 - NTS_DM Other Other -191 49 1 6 600 549 184 50 28 chrU 2008799 2008978 -8040059 - NTS_DM Other Other 0 240 58 6 600 928 130 0 0 chrU 2008992 2009146 -8039891 - NTS_DM Other Other -86 154 1 6 600 255 196 18 0 chrU 2009221 2009277 -8039760 - NTS_DM Other Other -183 57 1 6 600 1028 147 34 21 chrU 2009277 2009514 -8039523 - NTS_DM Other Other 0 240 1 6 600 263 125 21 0 chrU 2009605 2009653 -8039384 - NTS_DM Other Other -191 49 1 6 600 678 143 44 28 chrU 2009653 2009833 -8039204 - NTS_DM Other Other 0 240 58 6 600 583 100 0 0 chrU 2009847 2009947 -8039090 - NTS_DM Other Other -86 154 55 6 600 285 104 21 0 chrU 2010032 2010080 -8038957 - NTS_DM Other Other -191 49 1 6 600 440 162 131 0 chrU 2010160 2010259 -8038778 - NTS_DM Other Other -128 112 1 6 600 228 214 18 0 chrU 2010334 2010390 -8038647 - NTS_DM Other Other -183 57 1 6 600 1028 147 34 21 chrU 2010390 2010627 -8038410 - NTS_DM Other Other 0 240 1 6 600 263 125 21 0 chrU 2010708 2010756 -8038281 - NTS_DM Other Other -191 49 1 6 600 700 137 44 28 chrU 2010756 2010936 -8038101 - NTS_DM Other Other 0 240 58 6 600 583 100 0 0 chrU 2010950 2011050 -8037987 - NTS_DM Other Other -86 154 55 6 600 292 104 21 0 chrU 2011136 2011184 -8037853 - NTS_DM Other Other -191 49 1 6 600 482 161 41 58 chrU 2011184 2011355 -8037682 - NTS_DM Other Other 0 240 73 6 600 904 136 0 0 chrU 2011359 2011513 -8037524 - NTS_DM Other Other -86 154 1 6 600 255 196 18 0 chrU 2011588 2011644 -8037393 - NTS_DM Other Other -183 57 1 6 600 505 129 49 35 chrU 2011644 2011788 -8037249 - NTS_DM Other Other 0 240 95 6 600 361 312 112 49 chrU 2012047 2012414 -8036623 + G_DM LINE Jockey 148 537 -3809 6 600 186 43 0 0 chrU 2012419 2012442 -8036595 + (CGA)n Simple_repeat Simple_repeat 2 24 0 6 600 621 238 12 12 chrU 2012456 2012626 -8036411 + G_DM LINE Jockey 636 805 -3541 6 600 3111 88 5 0 chrU 2012622 2013064 -8035973 + G2_DM LINE Jockey 550 993 -2109 6 600 1290 98 0 15 chrU 2013063 2013261 -8035776 + G2_DM LINE Jockey 1459 1653 -1449 6 600 927 77 8 0 chrU 2013262 2013392 -8035645 - G2_DM LINE Jockey -843 2259 2129 6 600 898 28 0 0 chrU 2013389 2013496 -8035541 + G2_DM LINE Jockey 280 386 -2716 6 600 28 79 0 0 chrU 2013550 2013613 -8035424 + AT_rich Low_complexity Low_complexity 1 63 0 6 600 1098 135 81 55 chrU 2013678 2014051 -8034986 + Transib5 DNA Transib 278 788 -2213 6 600 2190 53 20 0 chrU 2014059 2014361 -8034676 + G2_DM LINE Jockey 2795 3102 0 6 600 2469 112 22 27 chrU 2014388 2015787 -8033250 + DMSAT6 Satellite Satellite 1 1391 -80 6 600 2744 100 20 32 chrU 2015799 2045076 -8003961 + DMSAT6 Satellite Satellite 1 28913 0 6 600 2613 101 28 34 chrU 2045102 2048117 -8000920 + DMSAT6 Satellite Satellite 1 2995 -3 6 600 18477 9 1 3 chrU 2048218 2050481 -7998556 + STALKER4_I LTR Gypsy 4273 6530 0 6 600 3182 50 6 14 chrU 2050481 2050918 -7998119 + STALKER4_LTR LTR Gypsy 1 399 -3 6 600 28 48 0 0 chrU 2051006 2051048 -7997989 + AT_rich Low_complexity Low_complexity 1 42 0 6 600 36730 27 20 7 chrU 2051055 2057160 -7991877 + STALKER4_I LTR Gypsy 291 6530 0 6 600 3213 46 1 14 chrU 2057160 2057599 -7991438 + STALKER4_LTR LTR Gypsy 1 399 -3 6 600 1170 34 0 0 chrU 2057599 2057746 -7991291 + FW2_DM LINE Jockey 825 971 -2990 6 600 6576 77 101 52 chrU 2057725 2058886 -7990151 + FW2_DM LINE Jockey 1328 2545 -1416 6 600 3769 44 4 0 chrU 2058895 2059374 -7989663 + FW2_DM LINE Jockey 2807 3287 -674 6 600 602 24 85 0 chrU 2059384 2059466 -7989571 + FW2_DM LINE Jockey 3761 3849 -112 6 600 354 131 0 0 chrU 2059478 2059539 -7989498 + DMCR1A LINE CR1 2126 2186 -2284 6 600 3121 79 22 0 chrU 2059539 2059983 -7989054 + DMCR1A LINE CR1 2325 2778 -1692 6 600 31392 18 6 0 chrU 2059992 2063783 -7985254 - FW_DM LINE Jockey -33 4659 848 6 600 2965 38 0 0 chrU 2063782 2064151 -7984886 - FW_DM LINE Jockey -4323 369 1 6 600 381 274 8 8 chrU 2064329 2064454 -7984583 - DIVER2_I LTR Pao -1784 2363 2239 6 600 467 174 0 0 chrU 2064791 2064883 -7984154 - G3_DM LINE Jockey -4284 321 230 6 600 34 0 0 0 chrU 2065883 2065917 -7983120 + AT_rich Low_complexity Low_complexity 1 34 0 6 600 22 56 0 0 chrU 2066020 2066056 -7982981 + AT_rich Low_complexity Low_complexity 1 36 0 6 600 289 333 16 10 chrU 2067487 2067681 -7981356 - BLASTOPIA_I LTR Gypsy -746 3735 3541 6 600 266 293 24 24 chrU 2068435 2068576 -7980461 - Invader2_I LTR Gypsy -1843 2749 2624 6 600 239 308 45 45 chrU 2068724 2068969 -7980068 - BLASTOPIA_I LTR Gypsy -2057 2424 2180 6 600 186 71 0 0 chrU 2071060 2071088 -7977949 + (TTC)n Simple_repeat Simple_repeat 3 30 0 6 600 277 210 0 0 chrU 2071924 2071986 -7977051 + CT-rich Low_complexity Low_complexity 3 64 0 6 600 200 214 0 0 chrU 2072557 2072599 -7976438 + (ATG)n Simple_repeat Simple_repeat 1 42 0 6 600 200 134 0 82 chrU 2072718 2072791 -7976246 + (CTG)n Simple_repeat Simple_repeat 1 67 0 6 600 224 106 0 60 chrU 2073238 2073288 -7975749 + (CTG)n Simple_repeat Simple_repeat 1 47 0 6 600 201 320 13 0 chrU 2073577 2073652 -7975385 + (CTG)n Simple_repeat Simple_repeat 1 76 0 6 600 245 245 0 0 chrU 2073944 2074042 -7974995 - ROO_I LTR Pao -7513 743 646 6 600 850 113 51 32 chrU 2074639 2074795 -7974242 - G3_DM LINE Jockey -4365 240 82 6 600 274 348 25 10 chrU 2074649 2074852 -7974185 - DIVER2_I LTR Pao -2925 1222 1017 6 600 36798 6 0 5 chrU 2074956 2079320 -7969717 - DOC LINE Jockey -10 4715 374 6 600 3269 29 29 0 chrU 2079384 2079803 -7969234 + PROTOP_A DNA P 3 433 -672 6 600 2960 9 0 0 chrU 2079802 2080148 -7968889 + PROTOP_A DNA P 760 1105 0 6 600 41 36 0 0 chrU 2080883 2080938 -7968099 + AT_rich Low_complexity Low_complexity 1 55 0 6 600 570 67 44 22 chrU 2080986 2081077 -7967960 - G3_DM LINE Jockey -4512 93 1 6 600 239 221 68 23 chrU 2081605 2081680 -7967357 + DMCR1A LINE CR1 1290 1368 -3102 6 600 1785 138 58 39 chrU 2081680 2082169 -7966868 + DNAREP1_DM LINE Penelope 1 332 -262 6 600 22 35 0 0 chrU 2082285 2082314 -7966723 + AT_rich Low_complexity Low_complexity 1 29 0 6 600 403 70 0 40 chrU 2082613 2082687 -7966350 + (CAA)n Simple_repeat Simple_repeat 2 72 0 6 600 11558 92 5 2 chrU 2082744 2084474 -7964563 - S_DM DNA Tc1 0 1736 1 6 600 22 0 0 0 chrU 2084658 2084680 -7964357 + AT_rich Low_complexity Low_complexity 1 22 0 6 600 337 205 13 0 chrU 2084963 2085041 -7963996 - Gypsy8_I LTR Gypsy -4268 79 1 6 600 575 169 51 122 chrU 2085042 2085238 -7963799 - Gypsy8_LTR LTR Gypsy -1 303 122 6 600 734 198 113 136 chrU 2085469 2085814 -7963223 - Gypsy8_I LTR Gypsy -173 4174 3838 6 600 358 138 66 44 chrU 2086076 2086167 -7962870 - Gypsy8_I LTR Gypsy -928 3419 3327 6 600 3893 168 100 125 chrU 2086320 2087638 -7961399 - Gypsy8_I LTR Gypsy -1709 2638 1354 6 600 323 200 56 0 chrU 2087723 2087813 -7961224 + MAX_I LTR Pao 6425 6519 -1395 6 600 733 106 62 0 chrU 2087810 2087923 -7961114 + MAX_I LTR Pao 7121 7240 -674 6 600 511 196 80 0 chrU 2087946 2088058 -7960979 + MAX_I LTR Pao 7473 7593 -321 6 600 1289 209 190 15 chrU 2088165 2088796 -7960241 - DMRT1A LINE R1 -1010 4173 3433 6 600 207 135 0 51 chrU 2090362 2090401 -7958636 + GA-rich Low_complexity Low_complexity 2 38 0 6 600 655 273 69 29 chrU 2090712 2091131 -7957906 + QUASIMODO_I LTR Gypsy 1294 1729 -4331 6 600 876 261 4 4 chrU 2091145 2091417 -7957620 + TV1I LTR Gypsy 1543 1804 -3824 6 600 2387 275 60 12 chrU 2091416 2092481 -7956556 + TV1I LTR Gypsy 2541 3656 -2307 6 600 11930 44 63 3 chrU 2092492 2094999 -7954038 + DMCR1A LINE CR1 238 2896 -1574 6 600 2381 73 142 5 chrU 2095005 2095633 -7953404 + DMCR1A LINE CR1 3495 4208 -262 6 600 1387 92 4 62 chrU 2095654 2095910 -7953127 + BATUMI_LTR LTR Pao 32 272 0 6 600 3713 51 133 23 chrU 2095912 2096574 -7952463 + BATUMI_I LTR Pao 1 735 -7228 6 600 258 0 0 43 chrU 2096592 2096638 -7952399 + BATUMI_I LTR Pao 667 710 -7253 6 9 4480 4 0 0 chrU 2096638 2097156 -7951881 - NOMAD_LTR LTR Gypsy 0 518 1 6 601 3739 34 17 75 chrU 2097156 2097753 -7951284 + BATUMI_I LTR Pao 707 1268 -6695 6 601 1077 310 41 9 chrU 2098035 2098601 -7950436 - HMSBEAGLE_I LTR Gypsy -757 5772 5189 6 601 904 321 55 43 chrU 2098725 2099659 -7949378 - HMSBEAGLE_I LTR Gypsy -1575 4954 4010 6 601 2633 303 50 65 chrU 2099657 2101672 -7947365 - HMSBEAGLE_I LTR Gypsy -2732 3797 1812 6 601 21 36 0 0 chrU 2101935 2101963 -7947074 + AT_rich Low_complexity Low_complexity 1 28 0 6 601 52 41 0 0 chrU 2102012 2102085 -7946952 + AT_rich Low_complexity Low_complexity 1 73 0 6 601 817 81 0 0 chrU 2102397 2102516 -7946521 - STALKER4_LTR LTR Gypsy -236 166 48 6 601 2970 40 165 11 chrU 2102516 2103117 -7945920 + PROTOP_B DNA P 1 694 -459 6 601 21 0 0 0 chrU 2103292 2103313 -7945724 + AT_rich Low_complexity Low_complexity 1 21 0 6 601 1102 302 44 16 chrU 2104366 2104934 -7944103 - HMSBEAGLE_I LTR Gypsy -757 5772 5189 6 601 979 322 51 39 chrU 2105058 2105991 -7943046 - HMSBEAGLE_I LTR Gypsy -1575 4954 4010 6 601 1614 263 2 4 chrU 2105989 2106444 -7942593 - HMSBEAGLE_I LTR Gypsy -2732 3797 3344 6 601 1038 258 11 0 chrU 2106466 2106745 -7942292 - HMSBEAGLE_I LTR Gypsy -2904 3625 3344 6 601 1923 311 64 60 chrU 2106769 2108574 -7940463 - HMSBEAGLE_I LTR Gypsy -2906 3623 1812 6 601 21 36 0 0 chrU 2108837 2108865 -7940172 + AT_rich Low_complexity Low_complexity 1 28 0 6 601 52 41 0 0 chrU 2108914 2108987 -7940050 + AT_rich Low_complexity Low_complexity 1 73 0 6 601 817 81 0 0 chrU 2109299 2109418 -7939619 - STALKER4_LTR LTR Gypsy -236 166 48 6 601 2753 45 167 8 chrU 2109418 2110266 -7938771 + PROTOP_B DNA P 1 983 -170 6 601 383 70 53 0 chrU 2110418 2110475 -7938562 - ZAM_I LTR Gypsy -107 7383 7324 6 601 8817 27 1 1 chrU 2110475 2111580 -7937457 + PROTOP_A DNA P 1 1105 0 6 601 1815 52 0 0 chrU 2111580 2111812 -7937225 - ZAM_I LTR Gypsy -160 7330 7099 6 601 14570 53 94 6 chrU 2111807 2113931 -7935106 - ZAM_I LTR Gypsy -714 6776 4465 6 601 2942 91 105 11 chrU 2113932 2114398 -7934639 - DMRT1C LINE R1 -274 5169 4660 6 601 1462 95 122 8 chrU 2114406 2114651 -7934386 + ACCORD2_I LTR Gypsy 190 462 -6750 6 601 1007 114 19 19 chrU 2114652 2114813 -7934224 - DMRT1C LINE R1 0 5443 5283 6 601 8619 71 44 9 chrU 2114807 2116522 -7932515 - DMRT1C LINE R1 -331 5112 3187 6 601 4694 70 20 2 chrU 2116534 2117176 -7931861 - DMRT1C LINE R1 -3129 2314 1661 6 601 5637 165 98 76 chrU 2117188 2118942 -7930095 - STALKER4_I LTR Gypsy -1443 5087 3295 6 601 440 175 12 0 chrU 2118960 2119040 -7929997 - STALKER4_I LTR Gypsy -4521 2009 1929 6 601 5163 166 102 35 chrU 2119081 2120331 -7928706 - STALKER4_I LTR Gypsy -4829 1701 369 6 601 254 167 179 38 chrU 2120334 2120440 -7928597 - STALKER4_I LTR Gypsy -4981 1549 1429 6 601 3078 160 113 44 chrU 2120490 2121337 -7927700 - STALKER4_I LTR Gypsy -5209 1321 235 6 601 1451 64 4 102 chrU 2121532 2121776 -7927261 - STALKER4_LTR LTR Gypsy -114 288 69 6 601 621 191 9 110 chrU 2122039 2122257 -7926780 - TOM_I LTR Gypsy -5916 196 1 6 601 990 21 167 33 chrU 2122257 2122407 -7926630 - DMTOM1_LTR LTR Gypsy 0 410 241 6 601 5035 120 63 40 chrU 2122407 2123414 -7925623 - PROTOP_A DNA P 0 1105 76 6 601 1222 271 28 28 chrU 2123409 2123969 -7925068 - ROVER-I_DM LTR Gypsy -5354 1230 330 6 601 22 0 0 0 chrU 2124239 2124261 -7924776 + AT_rich Low_complexity Low_complexity 1 22 0 6 601 326 231 23 76 chrU 2124378 2124509 -7924528 - ROVER-I_DM LTR Gypsy -6460 124 1 6 601 409 100 14 28 chrU 2124509 2124572 -7924465 - DMTOM1_LTR LTR Gypsy 0 410 349 6 601 587 156 40 16 chrU 2124572 2124696 -7924341 - DMTOM1_LTR LTR Gypsy 0 410 284 6 601 260 194 75 0 chrU 2124713 2124780 -7924257 - DM176_LTR LTR Gypsy -141 366 295 6 601 255 215 11 151 chrU 2124888 2124981 -7924056 - DM176_LTR LTR Gypsy -238 269 190 6 601 24 32 0 0 chrU 2125038 2125069 -7923968 + AT_rich Low_complexity Low_complexity 1 31 0 6 601 2988 107 115 0 chrU 2125087 2125610 -7923427 - Stalker2_I LTR Gypsy -3528 3874 3292 6 601 3187 148 188 29 chrU 2125607 2127582 -7921455 - STALKER4_I LTR Gypsy -3840 2690 290 6 601 1891 87 3 68 chrU 2127754 2128064 -7920973 - STALKER4_LTR LTR Gypsy -110 292 3 6 601 238 109 21 21 chrU 2128064 2128109 -7920928 - DNAREP1_DM LINE Penelope -486 108 64 6 601 709 136 177 0 chrU 2128246 2128388 -7920649 - DM176_I LTR Gypsy -2049 4371 4204 6 601 228 150 0 0 chrU 2128388 2128428 -7920609 - DNAREP1_DM LINE Penelope 0 594 555 6 601 692 197 38 53 chrU 2128690 2128899 -7920138 + ROVER-LTR_DM LTR Gypsy 162 367 0 6 601 865 191 125 50 chrU 2128899 2129218 -7919819 + ROVER-I_DM LTR Gypsy 1 343 -6241 6 601 19314 224 18 13 chrU 2129389 2134161 -7914876 + ROVER-I_DM LTR Gypsy 691 5541 -879 6 601 1221 146 98 19 chrU 2134174 2134439 -7914598 + ROVER-I_DM LTR Gypsy 6299 6584 0 6 601 395 178 15 132 chrU 2134439 2134575 -7914462 + ROVER-LTR_DM LTR Gypsy 1 120 -247 6 601 5154 19 49 3 chrU 2134588 2135190 -7913847 - QUASIMODO_LTR LTR Gypsy 0 658 52 6 601 183 129 0 0 chrU 2135190 2135221 -7913816 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 601 5154 19 49 3 chrU 2135221 2135247 -7913790 - QUASIMODO_LTR LTR Gypsy -607 51 2 6 601 247 294 6 121 chrU 2135341 2135507 -7913530 + ACCORD2_I LTR Gypsy 526 672 -6540 6 601 227 207 86 118 chrU 2135614 2135707 -7913330 + MICROPIA_I LTR Gypsy 1 90 -4386 6 601 494 338 44 41 chrU 2135701 2136531 -7912506 + MICROPIA_I LTR Gypsy 337 1145 -2954 6 601 12799 70 8 4 chrU 2136535 2138264 -7910773 + S_DM DNA Tc1 1 1736 0 6 601 1859 322 58 7 chrU 2138270 2139242 -7909795 + MICROPIA_I LTR Gypsy 1151 2171 -2305 6 601 229 31 125 0 chrU 2139253 2139285 -7909752 + Invader2_LTR LTR Gypsy 1 36 -230 6 601 873 38 0 0 chrU 2139277 2139382 -7909655 + Invader2_LTR LTR Gypsy 162 266 0 6 601 13873 10 62 4 chrU 2139382 2141091 -7907946 + Invader2_I LTR Gypsy 1 1808 -2784 6 601 5036 31 0 0 chrU 2141089 2141745 -7907292 + NINJA_I LTR Pao 1870 2576 -3435 6 601 313 253 0 0 chrU 2141745 2141831 -7907206 + Invader5_I LTR Gypsy 962 1033 -2301 6 601 727 311 7 7 chrU 2141860 2142135 -7906902 + MICROPIA_I LTR Gypsy 1897 2171 -2305 6 601 229 31 125 0 chrU 2142146 2142178 -7906859 + Invader2_LTR LTR Gypsy 1 36 -230 6 601 873 38 0 0 chrU 2142170 2142275 -7906762 + Invader2_LTR LTR Gypsy 162 266 0 6 601 12191 32 41 9 chrU 2142275 2143981 -7905056 + Invader2_I LTR Gypsy 1 1808 -2784 6 601 8148 31 0 4 chrU 2143979 2144961 -7904076 + NINJA_I LTR Pao 1870 2847 -3164 6 601 11235 28 97 1 chrU 2144938 2146355 -7902682 + NINJA_I LTR Pao 3999 5551 -460 6 601 973 57 0 8 chrU 2146353 2146476 -7902561 + NINJA_LTR LTR Pao 195 316 -1 6 601 19213 17 40 4 chrU 2146476 2148936 -7900101 - QUASIMODO_I LTR Gypsy -44 6016 3468 6 601 1620 5 0 2 chrU 2149036 2150261 -7898776 + (CTTAT)n Simple_repeat Simple_repeat 1 1222 0 6 601 1446 33 0 0 chrU 2150281 2150461 -7898576 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 6 601 349 253 0 62 chrU 2150468 2150565 -7898472 - G_DM LINE Jockey -1265 3081 2991 6 601 355 267 11 0 chrU 2150901 2150991 -7898046 - G2_DM LINE Jockey -1829 1273 1183 6 601 600 73 0 20 chrU 2151134 2151232 -7897805 - G_DM LINE Jockey 0 4346 4251 6 601 1177 88 112 21 chrU 2151232 2151419 -7897618 - G_DM LINE Jockey -278 4068 3865 6 601 270 86 0 0 chrU 2151915 2151950 -7897087 - G6_DM LINE Jockey -2006 36 2 6 601 25 31 0 0 chrU 2151981 2152013 -7897024 + AT_rich Low_complexity Low_complexity 1 32 0 6 601 35 0 0 0 chrU 2153119 2153154 -7895883 + AT_rich Low_complexity Low_complexity 1 35 0 6 601 292 0 0 0 chrU 2153322 2153354 -7895683 - NTS_DM Other Other -208 32 1 6 601 4296 194 38 18 chrU 2153478 2155070 -7893967 + G2_DM LINE Jockey 4 1743 -299 6 601 4295 24 0 2 chrU 2155067 2155575 -7893462 + G2_DM LINE Jockey 2591 3097 -5 6 601 21 0 0 0 chrU 2156536 2156557 -7892480 + AT_rich Low_complexity Low_complexity 1 21 0 6 601 23 33 0 0 chrU 2157044 2157074 -7891963 + AT_rich Low_complexity Low_complexity 1 30 0 6 601 721 34 248 0 chrU 2157191 2157308 -7891729 - G2_DM LINE Jockey -12 3090 2945 6 601 205 162 0 0 chrU 2157308 2157345 -7891692 + (TTG)n Simple_repeat Simple_repeat 3 39 0 6 601 23 33 0 0 chrU 2157409 2157439 -7891598 + AT_rich Low_complexity Low_complexity 1 30 0 6 601 9951 48 58 0 chrU 2157555 2158853 -7890184 - G2_DM LINE Jockey -10 3092 1720 6 601 3259 52 2 0 chrU 2158837 2159241 -7889796 - G2_DM LINE Jockey -1877 1225 821 6 601 1211 53 0 0 chrU 2159239 2159390 -7889647 - G2_DM LINE Jockey -2422 680 530 6 601 31 44 0 0 chrU 2159480 2159525 -7889512 + AT_rich Low_complexity Low_complexity 1 45 0 6 601 26 88 0 0 chrU 2159561 2159629 -7889408 + AT_rich Low_complexity Low_complexity 1 68 0 6 601 25 31 0 0 chrU 2159748 2159780 -7889257 + AT_rich Low_complexity Low_complexity 1 32 0 6 601 982 17 0 8 chrU 2160086 2160203 -7888834 + G_DM LINE Jockey 1629 1744 -2602 6 601 10121 50 6 12 chrU 2160193 2161530 -7887507 + G2_DM LINE Jockey 4 1743 -299 6 601 4621 32 0 0 chrU 2161528 2162082 -7886955 + G2_DM LINE Jockey 2540 3093 -9 6 601 24 67 0 0 chrU 2163177 2163222 -7885815 + AT_rich Low_complexity Low_complexity 1 45 0 6 601 3064 27 5 0 chrU 2163316 2163685 -7885352 + G2_DM LINE Jockey 2719 3089 -13 6 601 26 0 0 0 chrU 2163725 2163751 -7885286 + AT_rich Low_complexity Low_complexity 1 26 0 6 601 24 67 0 0 chrU 2164788 2164833 -7884204 + AT_rich Low_complexity Low_complexity 1 45 0 6 601 3053 30 5 0 chrU 2164926 2165297 -7883740 + G2_DM LINE Jockey 2719 3091 -11 6 601 24 0 0 0 chrU 2165337 2165361 -7883676 + AT_rich Low_complexity Low_complexity 1 24 0 6 601 24 67 0 0 chrU 2166412 2166457 -7882580 + AT_rich Low_complexity Low_complexity 1 45 0 6 601 3066 25 5 0 chrU 2166550 2166918 -7882119 + G2_DM LINE Jockey 2719 3088 -14 6 601 25 0 0 0 chrU 2166958 2166983 -7882054 + AT_rich Low_complexity Low_complexity 1 25 0 6 601 24 67 0 0 chrU 2168031 2168076 -7880961 + AT_rich Low_complexity Low_complexity 1 45 0 6 601 2173 23 4 0 chrU 2168169 2168428 -7880609 + G2_DM LINE Jockey 2719 2978 -124 6 601 12539 123 34 12 chrU 2168425 2170999 -7878038 - G2_DM LINE Jockey -1549 2797 4 6 601 20688 20 15 3 chrU 2171819 2174254 -7874783 - DMRT1B LINE R1 0 5183 2720 6 601 871 258 132 44 chrU 2174333 2174788 -7874249 + G_DM LINE Jockey 366 860 -3486 6 601 6723 23 22 0 chrU 2174782 2175593 -7873444 + G2_DM LINE Jockey 2164 2992 -110 6 601 2229 83 62 0 chrU 2175578 2175903 -7873134 + G2_DM LINE Jockey 892 1236 -1866 6 601 7745 56 45 3 chrU 2175888 2176890 -7872147 + G2_DM LINE Jockey 1355 2398 -704 6 601 3370 41 119 0 chrU 2176885 2177346 -7871691 + G2_DM LINE Jockey 2501 3016 -86 6 601 10362 29 12 0 chrU 2177995 2179222 -7869815 - DOC2_DM LINE Jockey 0 4793 3552 6 601 17070 43 11 5 chrU 2179233 2181364 -7867673 - DOC2_DM LINE Jockey -1537 3256 1112 6 601 1764 36 4 94 chrU 2181363 2181640 -7867397 - DOC2_DM LINE Jockey -3815 978 727 6 601 1647 121 21 36 chrU 2181638 2182038 -7866999 - DOC2_DM LINE Jockey -4307 486 6 6 601 233 61 0 0 chrU 2182155 2182188 -7866849 - TART_B1 LINE telomeric -5260 5394 5362 6 601 780 138 22 0 chrU 2182183 2182321 -7866716 - G5_DM LINE Jockey -58 4798 4658 6 601 21 0 0 0 chrU 2182390 2182411 -7866626 + AT_rich Low_complexity Low_complexity 1 21 0 6 601 21 0 0 0 chrU 2182532 2182553 -7866484 + AT_rich Low_complexity Low_complexity 1 21 0 6 601 35 24 0 0 chrU 2183101 2183143 -7865894 + AT_rich Low_complexity Low_complexity 1 42 0 6 601 1035 23 0 0 chrU 2183143 2183272 -7865765 - BS LINE Jockey 0 5126 4998 6 601 5287 65 9 0 chrU 2183489 2184169 -7864868 - G2_DM LINE Jockey -697 2405 1720 6 601 1784 77 295 3 chrU 2184153 2184478 -7864559 - G2_DM LINE Jockey -1877 1225 806 6 601 282 29 0 0 chrU 2184478 2184513 -7864524 + (GAGAA)n Simple_repeat Simple_repeat 3 37 0 6 601 1512 43 0 1 chrU 2184513 2185469 -7863568 + (ATAAG)n Simple_repeat Simple_repeat 1 955 0 6 601 10894 9 44 1 chrU 2185469 2187506 -7861531 - DOC LINE Jockey -1 4724 2600 6 601 2347 0 4 0 chrU 2187509 2187781 -7861256 + G2_DM LINE Jockey 2828 3100 -2 6 601 22377 4 12 3 chrU 2187781 2190323 -7858714 - DOC LINE Jockey -2119 2606 44 6 601 1488 37 3 3 chrU 2190357 2191880 -7857157 + (ATAAG)n Simple_repeat Simple_repeat 1 1523 0 6 601 1521 36 1 3 chrU 2191895 2193423 -7855614 + (ATAAG)n Simple_repeat Simple_repeat 1 1525 0 6 601 1521 36 1 3 chrU 2193443 2194971 -7854066 + (ATAAG)n Simple_repeat Simple_repeat 1 1525 0 6 601 1521 36 1 3 chrU 2194991 2196519 -7852518 + (ATAAG)n Simple_repeat Simple_repeat 1 1525 0 6 601 1521 36 1 3 chrU 2196539 2198067 -7850970 + (ATAAG)n Simple_repeat Simple_repeat 1 1525 0 6 601 308 70 0 50 chrU 2198067 2198087 -7850950 + (GAGAA)n Simple_repeat Simple_repeat 2 21 0 6 601 1521 19 0 0 chrU 2198087 2198267 -7850770 + (ATAAG)n Simple_repeat Simple_repeat 1 181 -184 6 601 1521 19 0 0 chrU 2198272 2198452 -7850585 + (ATAAG)n Simple_repeat Simple_repeat 182 365 0 6 601 308 70 0 50 chrU 2198452 2198467 -7850570 + (GAGAA)n Simple_repeat Simple_repeat 2 16 0 6 601 1439 22 6 0 chrU 2198467 2198646 -7850391 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 6 601 308 70 0 50 chrU 2198646 2198663 -7850374 + (GAGAA)n Simple_repeat Simple_repeat 2 18 0 6 601 1488 43 1 2 chrU 2198663 2199661 -7849376 + (ATAAG)n Simple_repeat Simple_repeat 1 997 0 6 601 1997 13 0 0 chrU 2199762 2199987 -7849050 - BATUMI_I LTR Pao -7738 225 1 6 601 1768 38 4 44 chrU 2199987 2200238 -7848799 - BATUMI_LTR LTR Pao 0 272 32 6 601 7035 200 35 6 chrU 2200254 2201745 -7847292 + ROVER-I_DM LTR Gypsy 3241 4774 -1810 6 601 1517 177 87 0 chrU 2201734 2202068 -7846969 + ROVER-I_DM LTR Gypsy 4946 5308 -1276 6 601 2683 175 80 18 chrU 2202070 2202723 -7846314 + ROVER-I_DM LTR Gypsy 5892 6584 0 6 601 1482 80 93 0 chrU 2202722 2202947 -7846090 + ROVER-LTR_DM LTR Gypsy 1 246 -121 6 601 2722 114 154 22 chrU 2202969 2203621 -7845416 - ACCORD2_I LTR Gypsy -5891 1321 364 6 601 22403 62 13 5 chrU 2203633 2206744 -7842293 + I_DM LINE I 99 3236 -2995 6 601 14099 73 20 1 chrU 2206753 2208743 -7840294 + I_DM LINE I 3433 5461 -770 6 601 2307 56 74 61 chrU 2208768 2209131 -7839906 - ACCORD2_I LTR Gypsy -6844 368 1 6 601 838 146 77 30 chrU 2209131 2209300 -7839737 - ACCORD2_LTR LTR Gypsy 0 215 39 6 601 252 29 86 0 chrU 2209358 2209393 -7839644 - Gypsy9_I LTR Gypsy -1396 3281 3244 6 601 2202 317 23 13 chrU 2209442 2210412 -7838625 - Gypsy9_I LTR Gypsy -1539 4749 3771 6 601 1687 170 4 19 chrU 2210416 2210820 -7838217 - Gypsy9_I LTR Gypsy -4029 2259 1725 6 601 5697 163 40 64 chrU 2210791 2212134 -7836903 + Gypsy12_LTR LTR Gypsy 1027 2336 0 6 601 4475 129 61 38 chrU 2212134 2213979 -7835058 - Gypsy9_I LTR Gypsy -4520 1768 2 6 601 278 280 48 60 chrU 2214127 2214294 -7834743 + Gypsy7_I LTR Gypsy 1204 1368 -3616 6 601 1595 254 2 7 chrU 2214290 2214694 -7834343 + Gypsy7_I LTR Gypsy 2713 3114 -1870 6 601 565 301 0 0 chrU 2214706 2214869 -7834168 + BURDOCK_I LTR Gypsy 3489 3651 -2209 6 601 7588 76 53 8 chrU 2214867 2216195 -7832842 + DMCR1A LINE CR1 3039 4470 0 6 601 366 88 123 0 chrU 2216251 2216308 -7832729 + DNAREP1_DM LINE Penelope 1 64 -530 6 601 353 194 0 0 chrU 2216436 2216503 -7832534 - Gypsy3_LTR LTR Gypsy -101 297 231 6 601 2025 182 16 13 chrU 2216511 2216895 -7832142 - Gypsy8_I LTR Gypsy -3328 1019 635 6 601 372 281 96 0 chrU 2216897 2217032 -7832005 - OSVALDO_I LTR Gypsy -6007 646 499 6 601 316 242 79 24 chrU 2217374 2217394 -7831643 + P_DG DNA P 2738 2764 -124 6 601 914 128 212 0 chrU 2217394 2217649 -7831388 - DNAREP1_DM LINE Penelope 0 594 286 6 601 393 301 52 68 chrU 2217881 2218320 -7830717 - HMSBEAGLE_I LTR Gypsy -721 5808 5377 6 601 23 33 0 0 chrU 2218441 2218471 -7830566 + AT_rich Low_complexity Low_complexity 1 30 0 6 601 54 0 0 0 chrU 2218535 2218589 -7830448 + AT_rich Low_complexity Low_complexity 1 54 0 6 601 780 286 32 11 chrU 2218652 2218931 -7830106 - HMSBEAGLE_I LTR Gypsy -2661 3868 3584 6 601 29 47 0 0 chrU 2219168 2219211 -7829826 + AT_rich Low_complexity Low_complexity 1 43 0 6 601 23 33 0 0 chrU 2220729 2220759 -7828278 + AT_rich Low_complexity Low_complexity 1 30 0 6 601 243 65 0 0 chrU 2221900 2221931 -7827106 - DNAREP1_DM LINE Penelope 0 594 564 6 601 1255 151 127 4 chrU 2222044 2222459 -7826578 - R1-2_DM LINE R1 -14 3202 2929 6 601 1532 91 68 0 chrU 2222458 2222679 -7826358 - R1-2_DM LINE R1 -592 2624 2389 6 601 3679 83 162 2 chrU 2222666 2223221 -7825816 - R1-2_DM LINE R1 -1884 1332 689 6 601 2029 91 74 3 chrU 2223243 2223541 -7825496 - MDG1_LTR LTR Gypsy -30 412 94 6 601 372 88 0 0 chrU 2223543 2223600 -7825437 + (TTA)n Simple_repeat Simple_repeat 3 59 0 6 601 755 52 223 46 chrU 2223606 2223788 -7825249 - MDG1_I LTR Gypsy 0 6596 6393 6 75 46991 39 10 15 chrU 2223794 2229693 -7819344 - MDG1_I LTR Gypsy -729 5867 1 6 602 1939 86 99 3 chrU 2229693 2229984 -7819053 - MDG1_LTR LTR Gypsy -30 412 94 6 602 351 105 0 0 chrU 2229986 2230043 -7818994 + (TTA)n Simple_repeat Simple_repeat 3 59 0 6 602 753 107 0 69 chrU 2230069 2230199 -7818838 - R1-2_DM LINE R1 -2874 342 222 6 602 721 211 235 40 chrU 2230512 2230759 -7818278 - R1_DM LINE R1 -4859 497 203 6 602 696 157 242 28 chrU 2230798 2231080 -7817957 - DNAREP1_DM LINE Penelope -121 473 131 6 602 2406 163 100 65 chrU 2231080 2231652 -7817385 - DNAREP1_DM LINE Penelope 0 594 3 6 602 21 0 0 0 chrU 2233360 2233381 -7815656 + AT_rich Low_complexity Low_complexity 1 21 0 6 602 325 197 0 0 chrU 2234295 2234366 -7814671 - DNAREP1_DM LINE Penelope -18 576 506 6 602 906 98 110 0 chrU 2234946 2235104 -7813933 + DNAREP1_DM LINE Penelope 87 262 -332 6 602 875 145 82 0 chrU 2235104 2235263 -7813774 + DNAREP1_DM LINE Penelope 1 172 -422 6 602 645 192 66 56 chrU 2236223 2236387 -7812650 - Gypsy10_I LTR Gypsy -2717 2561 2423 6 602 2510 75 32 20 chrU 2236387 2236803 -7812234 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 602 57707 15 8 12 chrU 2236803 2243701 -7805336 + Gypsy6_I LTR Gypsy 1 7012 0 6 602 2510 75 32 20 chrU 2243703 2244119 -7804918 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 602 2649 193 119 20 chrU 2244119 2244809 -7804228 - Gypsy10_I LTR Gypsy -2854 2424 1667 6 602 1328 245 77 32 chrU 2244813 2245313 -7803724 - Gypsy10_I LTR Gypsy -3882 1396 818 6 602 4005 0 0 0 chrU 2245313 2245741 -7803296 + ROO_LTR LTR Pao 1 428 0 6 602 6924 0 9 0 chrU 2245741 2246520 -7802517 + ROO_I LTR Pao 1 786 -7470 6 602 4815 6 0 0 chrU 2246520 2247038 -7801999 + NOMAD_LTR LTR Gypsy 1 518 0 6 602 61431 0 1 2 chrU 2247038 2253619 -7795418 + NOMAD_I LTR Gypsy 1 6572 0 6 602 3079 6 0 0 chrU 2253619 2253957 -7795080 + NOMAD_LTR LTR Gypsy 1 338 -180 6 602 2676 101 5 46 chrU 2254057 2255088 -7793949 - DMSAT6 Satellite Satellite -72 988 1 6 602 2771 108 15 15 chrU 2255888 2257137 -7791900 - DMSAT6 Satellite Satellite -36 1249 1 6 602 2682 113 20 29 chrU 2266051 2269579 -7779458 - DMSAT6 Satellite Satellite -13 3499 1 6 602 2640 112 12 25 chrU 2269595 2270667 -7778370 - DMSAT6 Satellite Satellite 0 1057 1 6 602 2596 106 15 30 chrU 2270678 2272643 -7776394 - DMSAT6 Satellite Satellite -28 1935 1 6 602 2629 118 14 31 chrU 2276313 2279719 -7769318 - DMSAT6 Satellite Satellite -305 3350 1 6 602 2477 127 10 18 chrU 2285840 2286625 -7762412 - DMSAT6 Satellite Satellite -64 779 1 6 602 2615 104 10 42 chrU 2286653 2288862 -7760175 - DMSAT6 Satellite Satellite 0 2138 1 6 602 2639 106 15 29 chrU 2288880 2292076 -7756961 - DMSAT6 Satellite Satellite -3 3149 1 6 602 617 69 0 11 chrU 2293271 2293359 -7755678 - DMSAT6 Satellite Satellite -65 405 319 6 602 1620 0 0 0 chrU 2293464 2293858 -7755179 + (AATAG)n Simple_repeat Simple_repeat 1 394 0 6 602 26 0 0 0 chrU 2295231 2295257 -7753780 + AT_rich Low_complexity Low_complexity 1 26 0 6 602 24 85 0 0 chrU 2295423 2295482 -7753555 + AT_rich Low_complexity Low_complexity 1 59 0 6 602 208 176 0 19 chrU 2296084 2296136 -7752901 + (TTTAA)n Simple_repeat Simple_repeat 2 52 0 6 602 1149 189 65 32 chrU 2296234 2296656 -7752381 - DNAREP1_DM LINE Penelope -1 593 124 6 602 21 0 0 0 chrU 2296906 2296927 -7752110 + AT_rich Low_complexity Low_complexity 1 21 0 6 602 1003 288 21 0 chrU 2297015 2297345 -7751692 - TRANSPAC_I LTR Gypsy -1549 3041 2705 6 602 318 320 119 47 chrU 2297503 2297739 -7751298 - TRANSPAC_I LTR Gypsy -2415 2175 1923 6 602 487 268 47 19 chrU 2297744 2297957 -7751080 - TRANSPAC_I LTR Gypsy -3085 1505 1287 6 602 27 73 0 0 chrU 2299061 2299116 -7749921 + AT_rich Low_complexity Low_complexity 1 55 0 6 602 25 0 0 0 chrU 2299194 2299219 -7749818 + AT_rich Low_complexity Low_complexity 1 25 0 6 602 23 0 0 0 chrU 2299904 2299927 -7749110 + AT_rich Low_complexity Low_complexity 1 23 0 6 602 23 54 0 0 chrU 2300168 2300205 -7748832 + AT_rich Low_complexity Low_complexity 1 37 0 6 602 26 0 0 0 chrU 2300242 2300268 -7748769 + AT_rich Low_complexity Low_complexity 1 26 0 6 602 5803 42 23 0 chrU 2302277 2302983 -7746054 + DOC3_DM LINE Jockey 2888 3609 -1131 6 602 2947 42 14 0 chrU 2302978 2303338 -7745699 + DOC3_DM LINE Jockey 4376 4740 0 6 602 10977 269 58 49 chrU 2303337 2306980 -7742057 + Gypsy6_I LTR Gypsy 2981 6657 -355 6 602 6279 59 142 0 chrU 2306982 2308105 -7740932 + I_DM LINE I 99 1381 -4850 6 602 6168 62 16 0 chrU 2308102 2308912 -7740125 + I_DM LINE I 2587 3409 -2822 6 602 2350 23 199 9 chrU 2308913 2309436 -7739601 - G5_DM LINE Jockey -12 4844 4223 6 602 5813 59 45 1 chrU 2309438 2310253 -7738784 + I_DM LINE I 4632 5482 -749 6 602 883 337 15 12 chrU 2310250 2310577 -7738460 + Gypsy6_I LTR Gypsy 6646 6973 -39 6 602 3172 57 37 7 chrU 2310587 2310993 -7738044 + Gypsy6A_LTR LTR Gypsy 3 420 0 6 602 1154 144 184 15 chrU 2312185 2312634 -7736403 + DNAREP1_DM LINE Penelope 7 401 -193 6 602 374 125 0 0 chrU 2312634 2312690 -7736347 + DNAREP1_DM LINE Penelope 324 379 -215 6 602 475 100 144 0 chrU 2312888 2312978 -7736059 - DMRT1B LINE R1 -4879 304 202 6 602 780 152 51 0 chrU 2312990 2313128 -7735909 - DMRT1B LINE R1 -5029 154 10 6 602 1857 101 16 63 chrU 2314789 2315106 -7733931 + Gypsy6A_LTR LTR Gypsy 1 302 -118 6 602 34 24 0 0 chrU 2315333 2315374 -7733663 + AT_rich Low_complexity Low_complexity 1 41 0 6 602 17196 264 18 25 chrU 2315620 2321663 -7727374 + Gypsy6_I LTR Gypsy 910 7011 -1 6 602 1857 101 16 63 chrU 2321666 2321983 -7727054 + Gypsy6A_LTR LTR Gypsy 1 302 -118 6 602 2759 318 30 38 chrU 2322035 2323879 -7725158 - Gypsy5_I LTR Gypsy -1929 4580 2751 6 602 257 351 42 37 chrU 2324874 2325090 -7723947 - TIRANT_I LTR Gypsy -5759 1933 1717 6 602 180 0 0 0 chrU 2325916 2325936 -7723101 + (TATG)n Simple_repeat Simple_repeat 3 22 0 6 602 257 241 17 25 chrU 2326075 2326194 -7722843 + T-rich Low_complexity Low_complexity 4 121 0 6 602 616 198 261 33 chrU 2326948 2327193 -7721844 - NINJA_I LTR Pao -5659 352 52 6 602 1086 182 82 40 chrU 2327208 2327511 -7721526 - NINJA_LTR LTR Pao -1 316 1 6 602 1836 163 84 13 chrU 2327519 2327899 -7721138 + DNAREP1_DM LINE Penelope 1 407 -187 6 602 4488 64 6 26 chrU 2328082 2328704 -7720333 - CIRCE LINE Composite -1376 4980 4371 6 602 5158 17 2 0 chrU 2328704 2329297 -7719740 + IDEFIX_LTR LTR Gypsy 1 594 0 6 602 25 0 0 0 chrU 2329487 2329512 -7719525 + AT_rich Low_complexity Low_complexity 1 25 0 6 602 12924 31 61 5 chrU 2329932 2332370 -7716667 + IDEFIX_I LTR Gypsy 1 2681 -2947 6 602 7691 3 1 1 chrU 2332470 2333317 -7715720 + Invader1_I LTR Gypsy 2339 3185 -1 6 602 3573 12 2 2 chrU 2333319 2333742 -7715295 + Invader1_LTR LTR Gypsy 1 423 0 6 602 565 124 198 0 chrU 2333757 2333878 -7715159 - DNAREP1_DM LINE Penelope -196 398 254 6 602 10824 28 51 1 chrU 2334647 2336019 -7713018 + DOC3_DM LINE Jockey 3300 4740 0 6 602 213 218 0 0 chrU 2336217 2336272 -7712765 + A-rich Low_complexity Low_complexity 1 55 0 6 602 1502 303 28 16 chrU 2336623 2337236 -7711801 + Gypsy4_I LTR Gypsy 674 1293 -4995 6 602 43 0 0 0 chrU 2338011 2338054 -7710983 + AT_rich Low_complexity Low_complexity 1 43 0 6 602 369 270 17 0 chrU 2338807 2338922 -7710115 + FW_DM LINE Jockey 1126 1242 -3450 6 602 1416 160 219 46 chrU 2338929 2339532 -7709505 + DMCR1A LINE CR1 42 748 -3722 6 602 1694 170 271 17 chrU 2339558 2340194 -7708843 + DMCR1A LINE CR1 1228 2025 -2445 6 602 682 184 0 22 chrU 2340199 2340338 -7708699 + DMCR1A LINE CR1 2487 2622 -1848 6 602 280 265 0 0 chrU 2340695 2340797 -7708240 + IDEFIX_I LTR Gypsy 4711 4812 -816 6 602 12187 5 5 1 chrU 2341106 2342536 -7706501 + BS2 LINE Jockey 1147 2581 -2140 6 602 4837 0 0 0 chrU 2342874 2343432 -7705605 - ACCORD_LTR LTR Gypsy 0 558 1 6 602 4817 16 2 0 chrU 2343432 2343991 -7705046 + BS2 LINE Jockey 2925 3484 -1237 6 602 643 243 100 13 chrU 2347630 2347859 -7701178 + Gypsy4_I LTR Gypsy 2743 3183 -2095 6 602 1208 331 59 39 chrU 2347910 2349350 -7699687 + Gypsy4_I LTR Gypsy 4456 5823 -465 6 602 43 0 0 0 chrU 2350319 2350362 -7698675 + AT_rich Low_complexity Low_complexity 1 43 0 6 602 263 232 0 42 chrU 2351106 2351178 -7697859 + FW_DM LINE Jockey 1174 1242 -3450 6 602 1602 170 184 18 chrU 2351260 2351863 -7697174 + DMCR1A LINE CR1 1323 2025 -2445 6 602 1484 170 3 11 chrU 2351868 2352154 -7696883 + DMCR1A LINE CR1 2487 2770 -1700 6 602 1336 150 212 11 chrU 2352153 2352598 -7696439 + DMCR1A LINE CR1 2893 3426 -1044 6 602 799 153 0 0 chrU 2352622 2352759 -7696278 + DMCR1A LINE CR1 3570 3706 -764 6 602 21 36 0 0 chrU 2352759 2352787 -7696250 + AT_rich Low_complexity Low_complexity 1 28 0 6 602 44 35 0 0 chrU 2353112 2353170 -7695867 + AT_rich Low_complexity Low_complexity 1 58 0 6 602 275 258 0 0 chrU 2354060 2354149 -7694888 + IDEFIX_I LTR Gypsy 4724 4812 -816 6 602 21 57 0 0 chrU 2354494 2354529 -7694508 + AT_rich Low_complexity Low_complexity 1 35 0 6 602 6241 71 101 1 chrU 2354643 2355587 -7693450 - R1-2_DM LINE R1 -2125 1091 54 6 602 477 272 77 5 chrU 2356139 2356346 -7692691 - MICROPIA_I LTR Gypsy -886 3590 3369 6 602 1038 264 22 27 chrU 2356455 2356825 -7692212 + Gypsy4_I LTR Gypsy 2024 2391 -3897 6 602 860 335 39 36 chrU 2356868 2357827 -7691210 + Gypsy4_I LTR Gypsy 4847 5823 -465 6 602 410 191 12 0 chrU 2358950 2359034 -7690003 + FW_DM LINE Jockey 1126 1210 -3482 6 75 1235 152 244 48 chrU 2359042 2359545 -7689492 + DMCR1A LINE CR1 147 748 -3722 6 603 1694 170 271 17 chrU 2359571 2360207 -7688830 + DMCR1A LINE CR1 1228 2025 -2445 6 603 682 184 0 22 chrU 2360212 2360351 -7688686 + DMCR1A LINE CR1 2487 2622 -1848 6 603 456 225 47 12 chrU 2360565 2360731 -7688306 + Gypsy2_I LTR Gypsy 2684 2789 -3346 6 603 919 309 94 30 chrU 2360782 2361697 -7687340 + Gypsy4_I LTR Gypsy 4456 5429 -859 6 603 2662 71 81 2 chrU 2367948 2368358 -7680679 - R1-2_DM LINE R1 -2721 495 54 6 603 634 312 76 20 chrU 2368658 2369146 -7679891 - Invader1_I LTR Gypsy -622 2564 2050 6 603 2807 271 16 13 chrU 2369252 2370179 -7678858 + Gypsy4_I LTR Gypsy 2024 2953 -3335 6 603 665 256 6 2 chrU 2370250 2370537 -7678500 + Gypsy4_I LTR Gypsy 4403 4744 -1544 6 603 6899 251 60 18 chrU 2370701 2372873 -7676164 - ROVER-I_DM LTR Gypsy -3556 3028 919 6 603 215 211 0 0 chrU 2372983 2373021 -7676016 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 603 1268 30 60 0 chrU 2373089 2373256 -7675781 + PROTOP_A DNA P 1 177 -928 6 603 2088 148 86 23 chrU 2373276 2373717 -7675320 - Gypsy12_LTR LTR Gypsy -73 2263 1795 6 603 2461 237 41 69 chrU 2373727 2374660 -7674377 - Gypsy12_LTR LTR Gypsy -1429 907 1 6 603 6331 88 1 16 chrU 2374660 2375569 -7673468 - Gypsy12_I LTR Gypsy 0 5546 4652 6 603 18782 98 65 4 chrU 2384505 2387337 -7661700 - Gypsy12_I LTR Gypsy -539 5007 2002 6 603 2764 259 43 69 chrU 2387890 2388965 -7660072 - Gypsy12_LTR LTR Gypsy -1289 1047 1 6 603 492 17 0 0 chrU 2388965 2389024 -7660013 - Gypsy12_I LTR Gypsy 0 5546 5488 6 603 2752 55 11 0 chrU 2394401 2394760 -7654277 - IDEFIX_I LTR Gypsy -5128 500 138 6 603 1947 55 125 0 chrU 2394760 2395102 -7653935 - DIVER2_LTR LTR Pao 0 385 1 6 603 2989 21 0 0 chrU 2395102 2395439 -7653598 - DIVER2_I LTR Pao 0 4147 3811 6 603 2250 232 61 62 chrU 2395459 2396200 -7652837 - Gypsy12_LTR LTR Gypsy -1596 740 1 6 603 1589 71 0 0 chrU 2396200 2396390 -7652647 + PROTOP_A DNA P 173 362 -743 6 603 4118 6 0 74 chrU 2396390 2396904 -7652133 + MICROPIA_LTR LTR Gypsy 1 476 0 6 603 2959 33 8 0 chrU 2396913 2397275 -7651762 - IDEFIX_I LTR Gypsy -4431 1197 833 6 603 4822 46 17 0 chrU 2403496 2404086 -7644951 - DIVER2_I LTR Pao -3120 1027 428 6 603 737 63 0 0 chrU 2404073 2404168 -7644869 - DIVER2_I LTR Pao -4052 95 1 6 603 3072 35 32 5 chrU 2404168 2404543 -7644494 - DIVER2_LTR LTR Pao 0 385 1 6 603 1064 78 7 0 chrU 2404543 2404684 -7644353 - IDEFIX_I LTR Gypsy -5486 142 1 6 603 25 0 0 0 chrU 2404957 2404982 -7644055 + AT_rich Low_complexity Low_complexity 1 25 0 6 603 1852 103 88 53 chrU 2405167 2405506 -7643531 - IDEFIX_LTR LTR Gypsy 0 594 244 6 603 2619 141 95 15 chrU 2405533 2406087 -7642950 - ACCORD2_I LTR Gypsy -5965 1247 450 6 603 633 319 71 66 chrU 2406279 2407589 -7641448 - ZAM_I LTR Gypsy -655 6835 5520 6 603 923 37 0 0 chrU 2407693 2407801 -7641236 - ACCORD_I LTR Gypsy -6180 108 1 6 603 5147 0 0 0 chrU 2407801 2408359 -7640678 - ACCORD_LTR LTR Gypsy 0 558 1 6 603 56862 4 1 1 chrU 2408359 2414648 -7634389 - ACCORD_I LTR Gypsy 0 6288 1 6 603 5119 2 0 0 chrU 2414648 2415206 -7633831 - ACCORD_LTR LTR Gypsy 0 558 1 6 603 7694 151 50 35 chrU 2415206 2417487 -7631550 - R1-2_DM LINE R1 -2672 2684 1 6 603 1912 68 57 20 chrU 2417656 2417954 -7631083 - TRANSIB3 DNA Transib -184 2699 2391 6 603 8821 51 56 3 chrU 2417962 2419116 -7629921 - TRANSIB3 DNA Transib -1577 1306 91 6 603 45 0 0 0 chrU 2419445 2419490 -7629547 + AT_rich Low_complexity Low_complexity 1 45 0 6 603 244 226 0 0 chrU 2419778 2419831 -7629206 - Jockey2 LINE Jockey -3125 303 251 6 603 734 334 11 8 chrU 2419924 2420262 -7628775 + G6_DM LINE Jockey 888 1221 -3125 6 603 230 167 62 0 chrU 2420259 2420307 -7628730 + STALKER4_I LTR Gypsy 789 839 -5691 6 603 338 259 86 8 chrU 2420312 2420429 -7628608 - MDG1_LTR LTR Gypsy -163 279 154 6 603 1172 346 19 16 chrU 2420481 2421104 -7627933 - GTWIN_I LTR Gypsy 0 6421 5797 6 603 2113 46 50 0 chrU 2421105 2421367 -7627670 + PROTOP DNA P 1 275 -4205 6 603 577 159 201 17 chrU 2421367 2421546 -7627491 + DNAREP1_DM LINE Penelope 138 349 -245 6 603 858 182 28 36 chrU 2421520 2421819 -7627218 + DNAREP1_DM LINE Penelope 96 331 -263 6 603 461 122 132 12 chrU 2421838 2421921 -7627116 + DNAREP1_DM LINE Penelope 335 427 -167 6 603 419 159 11 11 chrU 2422097 2422186 -7626851 - Gypsy8_I LTR Gypsy -4258 89 1 6 603 339 161 18 147 chrU 2422186 2422295 -7626742 - Gypsy8_LTR LTR Gypsy 0 304 210 6 603 3557 45 16 0 chrU 2422287 2422727 -7626310 + PROTOP_B DNA P 57 503 -650 6 603 946 58 32 0 chrU 2422719 2422874 -7626163 + PROTOP DNA P 541 701 -3779 6 603 3905 37 6 12 chrU 2422871 2423407 -7625630 - DOC5_DM LINE Jockey -118 4564 3970 6 603 796 122 4 20 chrU 2423420 2423969 -7625068 + RSP Satellite Satellite 1 540 0 6 603 1171 83 16 28 chrU 2423974 2424178 -7624859 - DOC5_DM LINE Jockey -1968 2714 2521 6 603 5012 20 77 2 chrU 2424171 2424784 -7624253 - DOC5_DM LINE Jockey -2279 2403 1745 6 603 10771 36 96 3 chrU 2424779 2426196 -7622841 - DOC5_DM LINE Jockey -3133 1549 1 6 603 435 70 0 0 chrU 2426194 2426251 -7622786 + PROTOP DNA P 4422 4479 -1 6 603 351 292 139 0 chrU 2426271 2426408 -7622629 - Gypsy_I LTR Gypsy -677 5830 5714 6 603 841 267 0 0 chrU 2426428 2426649 -7622388 - GTWIN_I LTR Gypsy -2772 3649 3429 6 603 3008 280 63 9 chrU 2426647 2427618 -7621419 - Gypsy_I LTR Gypsy -3221 3286 2264 6 603 2034 309 92 44 chrU 2427623 2428813 -7620224 - Gypsy_I LTR Gypsy -4424 2083 836 6 603 506 183 83 8 chrU 2429029 2429161 -7619876 - Gypsy6_LTR LTR Gypsy -111 296 155 6 603 1264 180 36 46 chrU 2429352 2429655 -7619382 + STALKER4_I LTR Gypsy 980 1279 -5251 6 603 8458 122 56 0 chrU 2429672 2431017 -7618020 + STALKER4_I LTR Gypsy 1563 2982 -3548 6 603 504 129 24 0 chrU 2431010 2431095 -7617942 + Stalker2_I LTR Gypsy 3761 3847 -3555 6 603 14144 62 23 0 chrU 2431106 2432905 -7616132 + STALKER4_I LTR Gypsy 3662 5502 -1028 6 603 732 169 0 23 chrU 2433105 2433238 -7615799 - R1_DM LINE R1 -206 5150 5021 6 603 402 197 0 0 chrU 2433269 2433340 -7615697 - R1_DM LINE R1 -474 4882 4812 6 603 280 161 242 0 chrU 2433922 2433984 -7615053 - DNAREP1_DM LINE Penelope -516 78 2 6 603 2246 33 25 0 chrU 2434287 2434561 -7614476 + Baggins1 LINE LOA 1 281 -5172 6 603 5133 48 100 4 chrU 2434550 2435241 -7613796 + Baggins1 LINE LOA 401 1157 -4296 6 603 14257 54 54 0 chrU 2435248 2437035 -7612002 + Baggins1 LINE LOA 1301 3183 -2270 6 603 11385 45 102 6 chrU 2437043 2438821 -7610216 + Baggins1 LINE LOA 3394 5341 -112 6 603 1314 68 288 18 chrU 2438816 2439042 -7609995 + ROOA_I LTR Pao 1489 1775 -5074 6 603 1738 52 0 0 chrU 2439037 2439247 -7609790 + ROOA_I LTR Pao 1962 2171 -4678 6 603 4166 45 75 31 chrU 2439247 2439818 -7609219 + ROOA_I LTR Pao 2377 2972 -3877 6 603 3144 40 16 0 chrU 2439844 2440224 -7608813 + ROOA_LTR LTR Pao 1 386 0 6 603 25 0 0 0 chrU 2440271 2440296 -7608741 + AT_rich Low_complexity Low_complexity 1 25 0 6 603 379 295 74 33 chrU 2440534 2440776 -7608261 + Gypsy9_I LTR Gypsy 3526 3777 -900 6 603 1067 127 52 6 chrU 2440809 2440983 -7608054 - PROTOP_B DNA P 0 1153 972 6 603 11684 83 78 63 chrU 2441052 2443010 -7606027 - Gypsy10_I LTR Gypsy -3277 2001 15 6 603 1960 18 305 0 chrU 2443008 2443283 -7605754 - Gypsy10_LTR LTR Gypsy -5 359 1 6 603 263 32 0 0 chrU 2443307 2443338 -7605699 - DMCR1A LINE CR1 -2354 2116 2086 6 603 7805 64 85 24 chrU 2443444 2444550 -7604487 + Gypsy7_I LTR Gypsy 1541 2714 -2270 6 603 1673 35 0 29 chrU 2444541 2444750 -7604287 - BATUMI_LTR LTR Pao -38 234 32 6 603 4870 63 17 5 chrU 2444772 2445425 -7603612 - BATUMI_I LTR Pao 0 7963 7303 6 603 2512 34 16 9 chrU 2445442 2445765 -7603272 + BATUMI_I LTR Pao 6427 6751 -1212 6 603 9157 215 2 17 chrU 2445778 2447189 -7601848 - BATUMI_I LTR Pao -4648 3315 1926 6 603 3503 69 4 46 chrU 2451470 2451989 -7597048 + Gypsy7_I LTR Gypsy 4394 4890 -94 6 603 778 75 0 28 chrU 2452112 2452221 -7596816 + Gypsy7_I LTR Gypsy 4879 4984 0 6 603 1701 80 0 49 chrU 2452221 2452485 -7596552 + Gypsy7_LTR LTR Gypsy 1 251 0 6 603 3290 16 0 0 chrU 2452498 2452871 -7596166 + DMRT1A LINE R1 2445 2817 -2366 6 603 18835 14 4 0 chrU 2452869 2454959 -7594078 + DMRT1A LINE R1 3086 5183 0 6 603 1465 94 0 51 chrU 2454968 2455182 -7593855 + STALKER4_LTR LTR Gypsy 171 373 -29 6 603 4506 22 130 0 chrU 2455221 2455897 -7593140 + DMCR1A LINE CR1 1009 1772 -2698 6 603 18760 1 0 1 chrU 2459831 2461864 -7587173 - DOC LINE Jockey -820 3905 1876 6 603 225 94 0 0 chrU 2461867 2461899 -7587138 - Invader1_LTR LTR Gypsy -391 32 1 6 603 198 91 0 0 chrU 2461949 2461982 -7587055 + (A)n Simple_repeat Simple_repeat 1 33 0 6 603 718 79 10 0 chrU 2461996 2462097 -7586940 + DMRT1C LINE R1 3489 3590 -1853 6 603 583 108 0 0 chrU 2462095 2462239 -7586798 - DOC5_DM LINE Jockey -4092 590 417 6 603 603 264 85 59 chrU 2462236 2462590 -7586447 + DMRT1A LINE R1 298 660 -4523 6 603 2150 290 106 21 chrU 2462636 2463660 -7585377 + DMRT1A LINE R1 781 1891 -3292 6 603 5784 104 113 0 chrU 2463659 2464551 -7584486 + DMRT1A LINE R1 27 1019 -4164 6 603 2078 57 4 0 chrU 2464548 2464810 -7584227 + DMRT1A LINE R1 1131 1393 -3790 6 603 6239 78 47 0 chrU 2464803 2465638 -7583399 + DMRT1A LINE R1 1718 2591 -2592 6 603 12588 44 63 2 chrU 2465631 2467290 -7581747 - DOC5_DM LINE Jockey -2629 2053 294 6 603 15298 27 31 3 chrU 2467301 2469087 -7579950 + DMCR1A LINE CR1 6 1841 -2629 6 603 262 0 0 0 chrU 2469088 2469117 -7579920 + DMCR1A LINE CR1 2217 2245 -2225 6 603 12680 27 0 1 chrU 2469116 2470564 -7578473 + DMCR1A LINE CR1 1396 2842 -1628 6 603 7412 38 68 0 chrU 2470558 2471482 -7577555 + DMCR1A LINE CR1 3484 4470 0 6 603 2131 41 3 55 chrU 2471485 2471793 -7577244 - DOC5_DM LINE Jockey -4388 294 3 6 603 1504 65 83 0 chrU 2471801 2472017 -7577020 + STALKER4_I LTR Gypsy 5143 5376 -1154 6 603 1307 71 0 0 chrU 2472018 2472186 -7576851 + STALKER4_I LTR Gypsy 5634 5801 -729 6 603 1313 75 6 0 chrU 2472189 2472363 -7576674 + DMRT1A LINE R1 4108 4282 -1161 6 603 442 114 101 0 chrU 2472388 2472467 -7576570 + DMRT1A LINE R1 5357 5443 0 6 603 11011 119 31 13 chrU 2472698 2474437 -7574600 + DMRT1B LINE R1 1 1770 -3413 6 603 1187 315 44 25 chrU 2474438 2475046 -7573991 - Gypsy12_I LTR Gypsy -1980 3566 2947 6 603 2215 32 3 31 chrU 2475322 2475614 -7573423 + BATUMI_I LTR Pao 7002 7285 -678 6 603 226 307 88 88 chrU 2475880 2476119 -7572918 - Gypsy12_I LTR Gypsy -3627 1919 1681 6 603 4676 128 50 1 chrU 2476972 2477706 -7571331 + DMRT1B LINE R1 1 770 -4413 6 603 2654 26 0 37 chrU 2477806 2478127 -7570910 - DIVER2_I LTR Pao -1422 2725 2417 6 603 13148 43 51 14 chrU 2479089 2480782 -7568255 - DIVER2_I LTR Pao -1705 2442 688 6 603 23 86 0 0 chrU 2480854 2480912 -7568125 + AT_rich Low_complexity Low_complexity 1 58 0 6 603 22 80 0 0 chrU 2481417 2481467 -7567570 + AT_rich Low_complexity Low_complexity 1 50 0 6 603 2279 259 30 4 chrU 2488991 2489533 -7559504 - Gypsy6_I LTR Gypsy -1853 5159 4604 6 75 3080 283 32 29 chrU 2489536 2490586 -7558451 - Gypsy6_I LTR Gypsy -4527 2485 1432 6 604 453 371 74 6 chrU 2490600 2490912 -7558125 - Gypsy6_I LTR Gypsy -5693 1319 987 6 604 30 45 0 0 chrU 2491160 2491204 -7557833 + AT_rich Low_complexity Low_complexity 1 44 0 6 604 1751 81 69 65 chrU 2491458 2491748 -7557289 - Gypsy6A_LTR LTR Gypsy -129 291 1 6 604 268 31 0 0 chrU 2492018 2492050 -7556987 - DMCR1A LINE CR1 -2877 1593 1562 6 604 3964 68 187 26 chrU 2492026 2492647 -7556390 - FW2_DM LINE Jockey -307 3654 2963 6 604 513 18 0 0 chrU 2492636 2492693 -7556344 - FW2_DM LINE Jockey -2130 1831 1775 6 604 2057 9 0 0 chrU 2492693 2492920 -7556117 + STALKER4_LTR LTR Gypsy 1 227 -175 6 604 5777 8 6 1 chrU 2496676 2497380 -7551657 + STALKER4_I LTR Gypsy 5824 6530 0 6 604 3679 2 0 2 chrU 2497380 2497783 -7551254 + STALKER4_LTR LTR Gypsy 1 402 0 6 604 3823 72 206 1 chrU 2497805 2498978 -7550059 - FW2_DM LINE Jockey -2186 1775 363 6 604 1209 66 0 18 chrU 2498979 2499148 -7549889 - FW2_DM LINE Jockey -3795 166 1 6 604 314 203 38 0 chrU 2499269 2499361 -7549676 - DOC2_DM LINE Jockey -4426 367 308 6 604 23 33 0 0 chrU 2499394 2499424 -7549613 + AT_rich Low_complexity Low_complexity 1 30 0 6 604 291 146 125 0 chrU 2499952 2500000 -7549037 + MAX_I LTR Pao 3534 3587 -4327 6 604 376 195 0 13 chrU 2500000 2500078 -7548959 + MAX_I LTR Pao 3588 3664 -4250 6 604 226 103 26 0 chrU 2500083 2500122 -7548915 + DNAREP1_DM LINE Penelope 555 594 0 6 604 718 148 111 0 chrU 2500130 2500265 -7548772 + MAX_I LTR Pao 6007 6156 -1758 6 604 1808 55 13 4 chrU 2500287 2500526 -7548511 - FW2_DM LINE Jockey -2547 1414 1174 6 604 963 170 12 36 chrU 2500798 2500993 -7548044 + MAX_I LTR Pao 2454 2704 -5210 6 604 297 176 88 0 chrU 2501021 2501089 -7547948 + MAX_I LTR Pao 3356 3429 -4485 6 604 1216 133 109 13 chrU 2501136 2501365 -7547672 + MAX_I LTR Pao 6007 6257 -1657 6 604 700 149 187 0 chrU 2501375 2501509 -7547528 + MAX_I LTR Pao 6550 6708 -1206 6 604 357 211 215 13 chrU 2501521 2501670 -7547367 + MAX_I LTR Pao 6821 6999 -915 6 604 427 305 46 40 chrU 2502341 2502783 -7546254 + QUASIMODO_I LTR Gypsy 510 961 -5002 6 604 228 285 107 44 chrU 2503180 2503452 -7545585 + QUASIMODO_I LTR Gypsy 1431 1719 -4341 6 604 4705 48 15 3 chrU 2503616 2504206 -7544831 + DMCR1A LINE CR1 2353 2949 -1521 6 604 2957 55 0 5 chrU 2504222 2504605 -7544432 + DMCR1A LINE CR1 3136 3516 -954 6 604 276 87 43 0 chrU 2504605 2504651 -7544386 - DMCR1A LINE CR1 -2588 1882 1835 6 604 1646 48 5 28 chrU 2510962 2511178 -7537859 - FW2_DM LINE Jockey -666 3295 3085 6 604 2685 58 55 0 chrU 2511185 2511548 -7537489 - FW2_DM LINE Jockey -2405 1556 1174 6 604 4021 209 37 15 chrU 2511688 2515600 -7533437 - SAR_DM Satellite Satellite -455 4000 1 6 604 525 134 0 0 chrU 2521642 2521724 -7527313 + ARS406_DM Unknown Unknown 108 189 -164 6 604 3766 212 33 12 chrU 2521661 2522789 -7526248 - SAR_DM Satellite Satellite -242 1150 1 6 604 3698 211 51 16 chrU 2523213 2524517 -7524520 - SAR_DM Satellite Satellite -216 1349 1 6 604 4075 211 38 16 chrU 2530556 2534799 -7514238 - SAR_DM Satellite Satellite -242 4338 1 6 604 4093 207 39 16 chrU 2540479 2545357 -7503680 - SAR_DM Satellite Satellite -1072 4989 1 6 604 933 0 0 9 chrU 2545461 2545567 -7503470 - MICROPIA_I LTR Gypsy -4371 105 1 6 604 4093 6 0 61 chrU 2545567 2546074 -7502963 - MICROPIA_LTR LTR Gypsy 0 476 1 6 604 697 127 127 56 chrU 2546074 2546340 -7502697 - BATUMI_I LTR Pao -7255 708 424 6 604 8921 26 12 15 chrU 2546340 2547449 -7501588 + PROTOP_A DNA P 1 1105 0 6 604 1806 97 80 50 chrU 2547449 2547875 -7501162 - BATUMI_I LTR Pao -7513 450 100 6 604 3823 55 2 2 chrU 2549519 2550379 -7498658 - CIRCE LINE Composite -5445 911 1 6 604 3060 39 0 0 chrU 2550379 2550742 -7498295 - CIRCE LINE Composite 0 6356 5994 6 604 16867 106 33 28 chrU 2550742 2553774 -7495263 - DMRT1C LINE R1 -755 4688 1545 6 604 2554 121 25 21 chrU 2553773 2554204 -7494833 - DMRT1C LINE R1 -4737 706 274 6 604 6765 120 82 103 chrU 2554197 2555771 -7493266 - CIRCE LINE Composite -435 5921 4381 6 604 2712 125 80 68 chrU 2556091 2556651 -7492386 - CIRCE LINE Composite -2085 4271 3705 6 604 633 59 103 185 chrU 2556649 2556795 -7492242 + CIRCE LINE Composite 427 560 -5796 6 604 2033 67 4 4 chrU 2556791 2557061 -7491976 + CIRCE LINE Composite 701 970 -5386 6 604 8164 58 13 12 chrU 2558287 2559351 -7489686 + CIRCE LINE Composite 2341 3405 -2951 6 604 1081 71 0 0 chrU 2560684 2560824 -7488213 + CIRCE LINE Composite 4841 4980 -1376 6 604 2124 35 0 4 chrU 2560988 2561242 -7487795 + ROOA_I LTR Pao 3150 3402 -3447 6 604 11235 56 72 2 chrU 2561367 2563421 -7485616 + ROOA_I LTR Pao 3150 5346 -1503 6 604 2773 33 63 0 chrU 2563559 2563921 -7485116 + ROOA_LTR LTR Pao 2 386 0 6 604 2132 132 76 92 chrU 2563921 2564473 -7484564 + Gypsy11_I LTR Gypsy 2155 3157 -3740 6 604 1705 243 24 12 chrU 2564626 2565121 -7483916 + DM412 LTR Gypsy 3598 4098 -2799 6 604 1203 215 38 0 chrU 2565115 2565380 -7483657 + DM412 LTR Gypsy 4427 4701 -2196 6 604 1727 172 140 0 chrU 2565384 2566011 -7483026 + DM412 LTR Gypsy 5220 5934 -963 6 604 1270 56 0 0 chrU 2566020 2566181 -7482856 + Gypsy11_I LTR Gypsy 2859 3019 -505 6 604 768 101 131 2 chrU 2566177 2566337 -7482700 + Gypsy11_I LTR Gypsy 3172 3338 -186 6 604 1438 34 17 0 chrU 2566357 2566534 -7482503 + Gypsy11_LTR LTR Gypsy 1 180 -272 6 604 1312 59 0 0 chrU 2566533 2566702 -7482335 + Gypsy11_LTR LTR Gypsy 284 452 0 6 604 550 181 8 25 chrU 2566727 2566846 -7482191 - G6_DM LINE Jockey -1598 444 328 6 604 2560 21 127 0 chrU 2566996 2567177 -7481860 + Stalker3_LTR LTR Gypsy 1 201 -171 6 604 207 0 0 0 chrU 2567177 2567200 -7481837 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 6 604 2560 21 127 0 chrU 2567200 2567348 -7481689 + Stalker3_LTR LTR Gypsy 202 371 -1 6 604 3268 175 39 25 chrU 2567356 2567994 -7481043 + Gypsy_I LTR Gypsy 1187 1833 -4674 6 604 5314 153 9 3 chrU 2567991 2568862 -7480175 + Gypsy_I LTR Gypsy 2101 2976 -3531 6 604 8665 140 46 5 chrU 2568848 2570281 -7478756 + Gypsy_I LTR Gypsy 3252 4743 -1764 6 604 391 93 0 0 chrU 2570277 2570331 -7478706 + Gypsy_I LTR Gypsy 2669 2722 -3785 6 604 1401 237 76 15 chrU 2570333 2571007 -7478030 + Gypsy_I LTR Gypsy 3465 4293 -2214 6 604 1928 187 63 23 chrU 2570993 2571420 -7477617 + Gypsy_I LTR Gypsy 4732 5175 -1332 6 604 228 280 40 0 chrU 2571510 2571585 -7477452 - DM176_I LTR Gypsy -3176 3244 3167 6 604 521 135 0 0 chrU 2571618 2571714 -7477323 - TLD2 Unknown Unknown 0 218 123 6 604 1317 20 0 0 chrU 2571715 2571867 -7477170 + PROTOP DNA P 148 299 -4181 6 604 709 32 21 0 chrU 2571879 2571972 -7477065 + PROTOP DNA P 361 455 -4025 6 604 22 0 0 0 chrU 2572290 2572312 -7476725 + AT_rich Low_complexity Low_complexity 1 22 0 6 604 408 58 0 0 chrU 2573426 2573478 -7475559 + IVK_DM LINE I 4679 4730 -672 6 604 36 53 0 0 chrU 2573853 2573910 -7475127 + AT_rich Low_complexity Low_complexity 1 57 0 6 604 3209 65 70 8 chrU 2574328 2575104 -7473933 - PROTOP DNA P -371 4109 3619 6 604 587 118 11 0 chrU 2575103 2575196 -7473841 - PROTOP DNA P -1026 3454 3361 6 604 5917 55 9 0 chrU 2575202 2575960 -7473077 - PROTOP DNA P -1370 3110 2346 6 604 27 29 0 0 chrU 2576301 2576335 -7472702 + AT_rich Low_complexity Low_complexity 1 34 0 6 604 382 254 80 64 chrU 2577043 2577234 -7471803 - BURDOCK_I LTR Gypsy -2862 3645 3319 6 604 1014 337 53 47 chrU 2577342 2577646 -7471391 + Gypsy4_I LTR Gypsy 2431 3093 -3436 6 604 1487 51 19 0 chrU 2577646 2577860 -7471177 + TLD2 Unknown Unknown 1 218 0 6 604 1014 337 53 47 chrU 2577860 2578412 -7470625 + Gypsy4_I LTR Gypsy 3094 4303 -2226 6 604 231 402 0 47 chrU 2578724 2578810 -7470227 + IDEFIX_I LTR Gypsy 4641 4722 -906 6 604 1325 146 204 22 chrU 2578862 2579363 -7469674 + IDEFIX_LTR LTR Gypsy 2 593 -1 6 604 23 0 0 0 chrU 2579593 2579616 -7469421 + AT_rich Low_complexity Low_complexity 1 23 0 6 604 1712 149 21 0 chrU 2579711 2579999 -7469038 + IDEFIX_I LTR Gypsy 1789 2082 -3546 6 604 1015 162 0 0 chrU 2579992 2580140 -7468897 + DM1731_I LTR Copia 3829 3976 0 6 604 2798 39 0 0 chrU 2580140 2580476 -7468561 + DM1731_LTR LTR Copia 1 336 0 6 604 832 320 38 37 chrU 2580476 2580837 -7468200 - DM297_I LTR Gypsy -3273 3739 3083 6 604 1460 51 19 0 chrU 2580837 2581051 -7467986 - TLD2 Unknown Unknown 0 218 1 6 604 832 320 38 37 chrU 2581051 2581507 -7467530 - DM297_I LTR Gypsy -3267 3082 2255 6 604 24 0 0 0 chrU 2581872 2581896 -7467141 + AT_rich Low_complexity Low_complexity 1 24 0 6 604 41 21 0 0 chrU 2582938 2582986 -7466051 + AT_rich Low_complexity Low_complexity 1 48 0 6 604 2060 143 21 3 chrU 2583451 2583787 -7465250 + IDEFIX_I LTR Gypsy 2011 2352 -3276 6 604 1597 136 53 17 chrU 2583785 2584085 -7464952 + IDEFIX_I LTR Gypsy 3344 3654 -1974 6 604 963 150 0 0 chrU 2584110 2584270 -7464767 + IDEFIX_I LTR Gypsy 4344 4503 -1125 6 604 442 143 0 0 chrU 2584267 2584337 -7464700 + IDEFIX_I LTR Gypsy 2283 2352 -3276 6 604 1512 146 53 17 chrU 2584335 2584635 -7464402 + IDEFIX_I LTR Gypsy 3344 3654 -1974 6 604 2010 188 3 0 chrU 2584659 2585037 -7464000 + IDEFIX_I LTR Gypsy 4344 4722 -906 6 604 27 0 0 0 chrU 2589913 2589940 -7459097 + AT_rich Low_complexity Low_complexity 1 27 0 6 604 3386 134 24 2 chrU 2590035 2590587 -7458450 + IDEFIX_I LTR Gypsy 1789 2352 -3276 6 604 2446 144 57 11 chrU 2590585 2591040 -7457997 + IDEFIX_I LTR Gypsy 3344 3819 -1809 6 604 225 138 241 0 chrU 2591032 2591090 -7457947 + IDEFIX_I LTR Gypsy 4028 4099 -1529 6 604 2080 175 3 3 chrU 2591090 2591469 -7457568 + IDEFIX_I LTR Gypsy 4344 4722 -906 6 604 816 139 77 50 chrU 2591520 2591702 -7457335 + IDEFIX_LTR LTR Gypsy 1 187 -407 6 604 23 0 0 0 chrU 2591902 2591925 -7457112 + AT_rich Low_complexity Low_complexity 1 23 0 6 604 546 211 0 0 chrU 2592046 2592155 -7456882 + IDEFIX_I LTR Gypsy 4801 4909 -719 6 604 684 142 16 32 chrU 2592141 2592265 -7456772 + IDEFIX_I LTR Gypsy 1574 1695 -3933 6 604 428 253 127 25 chrU 2592255 2592413 -7456624 + MICROPIA_I LTR Gypsy 1830 2003 -2473 6 604 9133 30 111 0 chrU 2600132 2601785 -7447252 + ACCORD2_I LTR Gypsy 5368 7203 -9 6 604 1480 0 6 23 chrU 2601785 2601961 -7447076 + ACCORD2_LTR LTR Gypsy 1 173 -42 6 604 1212 112 264 31 chrU 2601951 2602305 -7446732 + PROTOP DNA P 422 859 -3621 6 604 658 125 188 0 chrU 2602329 2602457 -7446580 + PROTOP DNA P 923 1074 -3406 6 604 550 56 65 32 chrU 2602465 2602558 -7446479 + PROTOP DNA P 3926 4021 -459 6 604 46 0 0 0 chrU 2602845 2602891 -7446146 + AT_rich Low_complexity Low_complexity 1 46 0 6 604 32 91 0 0 chrU 2603470 2603558 -7445479 + AT_rich Low_complexity Low_complexity 1 88 0 6 604 244 273 60 48 chrU 2605099 2605270 -7443767 - GTWIN_I LTR Gypsy -2137 4284 4123 6 604 3631 14 0 0 chrU 2605480 2605902 -7443135 + FW_DM LINE Jockey 4268 4689 -3 6 604 298 139 67 0 chrU 2605934 2606099 -7442938 + T-rich Low_complexity Low_complexity 5 180 0 6 604 314 8 0 134 chrU 2606073 2606215 -7442822 + (TTTTTA)n Simple_repeat Simple_repeat 4 126 0 6 604 222 157 86 0 chrU 2606217 2606287 -7442750 + (TTATA)n Simple_repeat Simple_repeat 4 79 0 6 604 261 83 0 0 chrU 2606720 2606756 -7442281 + (TA)n Simple_repeat Simple_repeat 1 36 0 6 604 636 123 45 30 chrU 2606948 2607082 -7441955 - DM297_LTR LTR Gypsy 0 414 279 6 604 25 51 0 0 chrU 2608258 2608297 -7440740 + AT_rich Low_complexity Low_complexity 1 39 0 6 604 29 28 0 0 chrU 2608411 2608447 -7440590 + AT_rich Low_complexity Low_complexity 1 36 0 6 604 465 179 0 31 chrU 2608519 2608617 -7440420 + DNAREP1_DM LINE Penelope 164 258 -336 6 604 584 109 10 10 chrU 2608615 2608717 -7440320 + DNAREP1_DM LINE Penelope 223 324 -270 6 604 24 32 0 0 chrU 2608868 2608899 -7440138 + AT_rich Low_complexity Low_complexity 1 31 0 6 604 2148 218 37 19 chrU 2609050 2609569 -7439468 - Gypsy12_I LTR Gypsy -3169 2377 1850 6 604 2820 154 109 13 chrU 2609560 2610111 -7438926 - Gypsy12_I LTR Gypsy -3848 1698 1095 6 604 2248 55 87 6 chrU 2610114 2610425 -7438612 + Gypsy9_LTR LTR Gypsy 1 336 0 6 604 39870 0 1 0 chrU 2610425 2615100 -7433937 + Gypsy9_I LTR Gypsy 1 4677 0 6 604 3030 0 0 0 chrU 2615102 2615436 -7433601 + Gypsy9_LTR LTR Gypsy 3 336 0 6 604 861 192 165 56 chrU 2615477 2615780 -7433257 - Gypsy12_I LTR Gypsy -4812 734 399 6 604 547 177 181 65 chrU 2615813 2616012 -7433025 - Gypsy12_I LTR Gypsy -5292 254 33 6 604 208 70 0 44 chrU 2616012 2616057 -7432980 + (TTA)n Simple_repeat Simple_repeat 3 45 0 6 604 2889 106 77 2 chrU 2616069 2616523 -7432514 - Gypsy12A_LTR LTR Gypsy 0 2280 1793 6 604 39 0 0 0 chrU 2616904 2616943 -7432094 + AT_rich Low_complexity Low_complexity 1 39 0 6 604 26 0 0 0 chrU 2617248 2617274 -7431763 + AT_rich Low_complexity Low_complexity 1 26 0 6 604 370 344 67 8 chrU 2617543 2617893 -7431144 + HMSBEAGLE_I LTR Gypsy 3359 3558 -2971 6 604 237 175 0 0 chrU 2618283 2618323 -7430714 + ACCORD_I LTR Gypsy 4127 4166 -2122 6 604 25 65 0 0 chrU 2619497 2619543 -7429494 + AT_rich Low_complexity Low_complexity 1 46 0 6 604 21 89 0 0 chrU 2620702 2620758 -7428279 + AT_rich Low_complexity Low_complexity 1 56 0 6 604 46 19 0 0 chrU 2621198 2621251 -7427786 + AT_rich Low_complexity Low_complexity 1 53 0 6 75 369 101 116 0 chrU 2621398 2621467 -7427570 - FB4_DM DNA Tc1 -3022 1067 991 6 605 478 88 15 0 chrU 2621454 2621522 -7427515 - FB4_DM DNA Tc1 -4020 69 1 6 605 3461 203 74 16 chrU 2621525 2624689 -7424348 - SAR_DM Satellite Satellite -242 3348 1 6 605 3844 193 59 18 chrU 2633078 2634271 -7414766 - SAR_DM Satellite Satellite -688 1241 1 6 605 1417 53 129 0 chrU 2634374 2634583 -7414454 + TRANSIB2 DNA Transib 2609 2844 0 6 605 577 130 43 0 chrU 2634607 2634699 -7414338 + TRANSIB2 DNA Transib 2233 2328 -516 6 605 2940 44 16 0 chrU 2634702 2635065 -7413972 + ROOA_LTR LTR Pao 1 369 -17 6 605 12035 44 68 32 chrU 2635063 2636739 -7412298 + ROOA_I LTR Pao 39 1775 -5074 6 605 4908 42 125 25 chrU 2636734 2637443 -7411594 + ROOA_I LTR Pao 1962 2741 -4108 6 605 3663 0 0 0 chrU 2637443 2637842 -7411195 + BLOOD_LTR LTR Gypsy 1 399 0 6 605 29341 0 0 0 chrU 2637842 2641115 -7407922 + BLOOD_I LTR Gypsy 1 3274 -3339 6 605 6507 1 0 0 chrU 2644272 2645035 -7404002 + BLOOD_I LTR Gypsy 5851 6613 0 6 605 3663 0 0 0 chrU 2645035 2645434 -7403603 + BLOOD_LTR LTR Gypsy 1 399 0 6 605 238 91 0 0 chrU 2645448 2645481 -7403556 + ROOA_I LTR Pao 2946 2978 -3871 6 605 1357 140 4 4 chrU 2645683 2645912 -7403125 - DNAREP1_DM LINE Penelope -346 248 20 6 605 599 264 69 0 chrU 2646137 2646311 -7402726 + MAX_I LTR Pao 1413 1598 -6316 6 605 857 176 52 0 chrU 2646359 2646512 -7402525 + MAX_I LTR Pao 2127 2287 -5627 6 605 6948 157 136 12 chrU 2646535 2648234 -7400803 + MAX_I LTR Pao 3770 5678 -2236 6 605 342 112 618 0 chrU 2648237 2648339 -7400698 + MAX_I LTR Pao 5970 6134 -1780 6 605 789 154 80 72 chrU 2648393 2648669 -7400368 + DNAREP1_DM LINE Penelope 222 551 -43 6 605 316 261 30 23 chrU 2648760 2648893 -7400144 + STALKER4_I LTR Gypsy 1429 1562 -4968 6 605 1846 111 242 26 chrU 2649225 2649643 -7399394 + DNAREP1_DM LINE Penelope 45 552 -42 6 605 268 119 47 170 chrU 2649761 2649853 -7399184 + DM412 LTR Gypsy 5494 5628 -1269 6 605 2325 157 102 4 chrU 2649850 2650310 -7398727 + DMCR1A LINE CR1 2688 3192 -1278 6 605 326 138 17 0 chrU 2650380 2650438 -7398599 + DMCR1A LINE CR1 3185 3243 -1227 6 605 23 0 0 0 chrU 2651204 2651227 -7397810 + AT_rich Low_complexity Low_complexity 1 23 0 6 605 3147 21 32 0 chrU 2651938 2652312 -7396725 + ROOA_LTR LTR Pao 1 386 0 6 605 22 35 0 0 chrU 2652653 2652682 -7396355 + AT_rich Low_complexity Low_complexity 1 29 0 6 605 1474 126 139 2 chrU 2652809 2653298 -7395739 + DNAREP1_DM LINE Penelope 1 594 0 6 605 32 57 0 0 chrU 2653369 2653422 -7395615 + AT_rich Low_complexity Low_complexity 1 53 0 6 605 399 213 25 134 chrU 2653611 2653768 -7395269 - DNAREP1_DM LINE Penelope -87 507 368 6 605 28 71 0 0 chrU 2654002 2654058 -7394979 + AT_rich Low_complexity Low_complexity 1 56 0 6 605 49 52 0 0 chrU 2654663 2654740 -7394297 + AT_rich Low_complexity Low_complexity 1 77 0 6 605 36 0 0 0 chrU 2655365 2655401 -7393636 + AT_rich Low_complexity Low_complexity 1 36 0 6 605 360 237 59 69 chrU 2655821 2656025 -7393012 + DNAREP1_DM LINE Penelope 86 287 -307 6 605 26 30 0 0 chrU 2656184 2656217 -7392820 + AT_rich Low_complexity Low_complexity 1 33 0 6 605 446 326 36 29 chrU 2656226 2656638 -7392399 - DOC4_DM LINE Jockey -3587 1138 656 6 605 3382 124 59 9 chrU 2657149 2657708 -7391329 + S_DM DNA Tc1 361 947 -789 6 605 4816 114 16 14 chrU 2657996 2658798 -7390239 + S_DM DNA Tc1 933 1736 0 6 605 2656 53 109 6 chrU 2658909 2659414 -7389623 - DOC3_DM LINE Jockey -1 4739 4183 6 605 15671 33 27 1 chrU 2659410 2661320 -7387717 - DOC3_DM LINE Jockey -662 4078 2120 6 605 5871 15 0 0 chrU 2661320 2661999 -7387038 - PROTOP DNA P 0 4480 3802 6 605 6440 29 21 6 chrU 2661994 2662805 -7386232 - PROTOP DNA P -3657 823 1 6 605 792 48 29 0 chrU 2662805 2662893 -7386144 - DOC3_DM LINE Jockey -2611 2129 2039 6 605 805 11 0 0 chrU 2662893 2662986 -7386051 + Gypsy12_LTR LTR Gypsy 1 93 -2243 6 605 206 105 26 0 chrU 2663801 2663839 -7385198 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 6 605 200 141 77 15 chrU 2665495 2665560 -7383477 + (TATAA)n Simple_repeat Simple_repeat 2 70 0 6 605 7940 9 1 1 chrU 2665618 2667215 -7381822 - DOC LINE Jockey 0 4725 3052 6 605 21 0 0 0 chrU 2673133 2673154 -7375883 + AT_rich Low_complexity Low_complexity 1 21 0 6 605 274 31 0 0 chrU 2673170 2673202 -7375835 - NTS_DM Other Other -207 33 2 6 605 206 105 26 0 chrU 2674604 2674642 -7374395 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 6 605 216 215 12 12 chrU 2676168 2676248 -7372789 + (TAA)n Simple_repeat Simple_repeat 3 82 0 6 605 619 36 72 0 chrU 2676473 2676556 -7372481 - G2_DM LINE Jockey -1217 1885 1797 6 605 195 69 0 0 chrU 2677165 2677194 -7371843 + (A)n Simple_repeat Simple_repeat 1 29 0 6 605 3316 93 13 19 chrU 2677231 2677804 -7371233 + DOC2_DM LINE Jockey 165 676 -4117 6 605 3169 47 66 0 chrU 2677800 2678226 -7370811 + DOC2_DM LINE Jockey 1008 1461 -3332 6 605 3135 21 27 0 chrU 2678230 2678606 -7370431 + DOC2_DM LINE Jockey 1592 1977 -2816 6 605 682 162 17 0 chrU 2678611 2678728 -7370309 - G_DM LINE Jockey -3226 1120 1002 6 605 247 62 0 0 chrU 2683449 2683481 -7365556 + NTS_DM Other Other 2 33 -207 6 605 21 0 0 0 chrU 2683497 2683518 -7365519 + AT_rich Low_complexity Low_complexity 1 21 0 6 605 1749 43 65 4 chrU 2684618 2684850 -7364187 + G2_DM LINE Jockey 1160 1405 -1697 6 605 11501 110 11 4 chrU 2684847 2686984 -7362053 - G2_DM LINE Jockey -160 4186 1546 6 605 22 0 0 0 chrU 2687010 2687032 -7362005 + AT_rich Low_complexity Low_complexity 1 22 0 6 605 194 33 0 62 chrU 2687225 2687257 -7361780 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 6 605 27 0 0 0 chrU 2687751 2687778 -7361259 + AT_rich Low_complexity Low_complexity 1 27 0 6 605 288 305 19 9 chrU 2688750 2688856 -7360181 - Invader2_I LTR Gypsy -2311 2281 2175 6 605 25 31 0 0 chrU 2689070 2689102 -7359935 + AT_rich Low_complexity Low_complexity 1 32 0 6 605 242 114 0 0 chrU 2689133 2689168 -7359869 + G6_DM LINE Jockey 2 36 -2006 6 605 2931 58 114 18 chrU 2689653 2690092 -7358945 + G_DM LINE Jockey 3865 4345 -1 6 605 364 331 15 7 chrU 2690193 2690330 -7358707 + G2_DM LINE Jockey 1136 1273 -1829 6 605 324 264 0 62 chrU 2690669 2690766 -7358271 + G_DM LINE Jockey 2991 3081 -1265 6 605 1533 44 2 6 chrU 2690773 2691634 -7357403 + (ATAAG)n Simple_repeat Simple_repeat 1 857 0 6 605 23151 2 0 2 chrU 2691770 2694411 -7354626 + STALKER4_I LTR Gypsy 3895 6530 0 6 605 3487 0 20 2 chrU 2694411 2694806 -7354231 + STALKER4_LTR LTR Gypsy 1 402 0 6 605 11413 12 7 0 chrU 2694830 2696128 -7352909 + FW_DM LINE Jockey 3381 4687 -5 6 605 4865 129 68 0 chrU 2696130 2697047 -7351990 - IDEFIX_I LTR Gypsy -2562 3066 2087 6 605 4771 115 4 3 chrU 2697045 2697744 -7351293 - IDEFIX_I LTR Gypsy -3876 1752 1053 6 605 1900 184 8 0 chrU 2697749 2698102 -7350935 - IDEFIX_I LTR Gypsy -5272 356 1 6 605 23 0 0 0 chrU 2698334 2698357 -7350680 + AT_rich Low_complexity Low_complexity 1 23 0 6 605 3013 108 61 59 chrU 2698564 2699157 -7349880 - IDEFIX_LTR LTR Gypsy 0 594 1 6 605 510 360 58 22 chrU 2699418 2700088 -7348949 - FW_DM LINE Jockey -1711 2981 2288 6 605 1501 124 15 5 chrU 2700091 2700450 -7348587 - DOC4_DM LINE Jockey -914 1877 1220 6 605 598 66 13 0 chrU 2700454 2700530 -7348507 - DOC4_DM LINE Jockey -1241 1550 1474 6 605 5935 67 111 8 chrU 2700528 2701584 -7347453 - DOC4_DM LINE Jockey -1625 1166 2 6 605 265 196 0 0 chrU 2701742 2701793 -7347244 + HELENA_RT LINE Jockey 570 620 -697 6 605 226 333 31 16 chrU 2701917 2702109 -7346928 + G4_DM LINE Jockey 3168 3362 -494 6 605 253 173 19 0 chrU 2703094 2703146 -7345891 - DNAREP1_DM LINE Penelope -46 548 496 6 605 357 314 25 6 chrU 2703494 2703654 -7345383 + Invader4_I LTR Gypsy 1 163 -2250 6 605 246 279 28 46 chrU 2703678 2703787 -7345250 + Invader6_I LTR Gypsy 888 994 -3105 6 605 814 317 116 32 chrU 2703837 2704550 -7344487 + Invader6_I LTR Gypsy 1367 2189 -1910 6 605 2933 38 68 0 chrU 2704582 2704949 -7344088 + ROO_LTR LTR Pao 1 392 -36 6 605 3261 36 274 41 chrU 2704949 2705555 -7343482 + ROO_I LTR Pao 96 842 -7414 6 605 24090 26 28 7 chrU 2705569 2708536 -7340501 + ROO_I LTR Pao 1112 4142 -4114 6 605 16642 21 4 0 chrU 2708556 2710491 -7338546 - FW_DM LINE Jockey -150 4542 2600 6 605 3598 12 2 0 chrU 2710490 2710902 -7338135 - FW_DM LINE Jockey -2499 2193 1781 6 605 8124 21 11 0 chrU 2711768 2712740 -7336297 + ROO_I LTR Pao 4592 5574 -2682 6 605 6846 29 0 0 chrU 2712737 2713557 -7335480 + ROO_I LTR Pao 5904 6723 -1533 6 605 6282 30 11 8 chrU 2713554 2714357 -7334680 + ROO_I LTR Pao 7451 8256 0 6 605 3302 30 62 0 chrU 2714357 2714760 -7334277 + ROO_LTR LTR Pao 1 428 0 6 605 1190 300 45 48 chrU 2714779 2715418 -7333619 + MICROPIA_I LTR Gypsy 2264 2843 -1633 6 605 1323 302 32 10 chrU 2715485 2715980 -7333057 + MICROPIA_I LTR Gypsy 3074 3579 -897 6 605 27 0 0 0 chrU 2716376 2716403 -7332634 + AT_rich Low_complexity Low_complexity 1 27 0 6 605 334 99 324 0 chrU 2716609 2716679 -7332358 - DNAREP1_DM LINE Penelope -1 593 501 6 605 3772 9 2 0 chrU 2716679 2717101 -7331936 + Invader1_LTR LTR Gypsy 1 423 0 6 605 11840 164 38 13 chrU 2717101 2719703 -7329334 + Invader1_I LTR Gypsy 1 2713 -1386 6 605 2501 104 27 17 chrU 2719805 2720822 -7328215 + DMSAT6 Satellite Satellite 1 1027 -3 6 605 2622 100 22 42 chrU 2728104 2729163 -7319874 + DMSAT6 Satellite Satellite 1 1038 -40 6 605 2535 94 12 48 chrU 2729491 2730702 -7318335 + DMSAT6 Satellite Satellite 1 1167 -99 6 605 2577 102 23 30 chrU 2730721 2737402 -7311635 + DMSAT6 Satellite Satellite 1 6636 -18 6 605 2548 109 21 36 chrU 2738351 2743787 -7305250 + DMSAT6 Satellite Satellite 1 5355 -51 6 605 2390 130 5 48 chrU 2743813 2746289 -7302748 + DMSAT6 Satellite Satellite 1 2368 -3 6 605 2477 87 23 40 chrU 2746329 2747598 -7301439 + DMSAT6 Satellite Satellite 1 1247 -3 6 605 11799 12 1 6 chrU 2747698 2749136 -7299901 - QUASIMODO_I LTR Gypsy -3565 2495 1065 6 605 19891 12 15 0 chrU 2749131 2751655 -7297382 + QUASIMODO_I LTR Gypsy 3500 6060 0 6 605 3426 36 53 9 chrU 2751655 2752133 -7296904 + QUASIMODO_LTR LTR Gypsy 1 658 0 6 75 3149 54 27 0 chrU 2752146 2752593 -7296444 + IDEFIX_I LTR Gypsy 4442 4900 -728 6 606 1727 31 135 3 chrU 2752612 2752989 -7296048 + IDEFIX_I LTR Gypsy 5202 5628 0 6 606 4122 38 59 2 chrU 2752989 2753551 -7295486 + IDEFIX_LTR LTR Gypsy 1 594 0 6 606 341 279 143 0 chrU 2753900 2754047 -7294990 - Gypsy6_I LTR Gypsy -2512 4500 4333 6 606 567 225 62 85 chrU 2754836 2755123 -7293914 + Gypsy8_LTR LTR Gypsy 1 299 -5 6 606 2738 34 37 3 chrU 2755130 2755484 -7293553 - DMCR1A LINE CR1 0 4470 4105 6 606 567 225 62 85 chrU 2755494 2755781 -7293256 + Gypsy8_LTR LTR Gypsy 1 299 -5 6 606 3139 32 83 0 chrU 2755788 2756315 -7292722 - DMCR1A LINE CR1 0 4470 3900 6 606 591 295 110 20 chrU 2756697 2757053 -7291984 - NINJA_I LTR Pao -4485 1526 1139 6 606 8183 37 76 9 chrU 2757101 2758479 -7290558 + TC1_DM DNA Tc1 1 1471 -195 6 606 25 51 0 0 chrU 2760489 2760528 -7288509 + AT_rich Low_complexity Low_complexity 1 39 0 6 606 1242 122 238 24 chrU 2760603 2760927 -7288110 + DNAREP1_DM LINE Penelope 78 470 -124 6 606 729 180 193 54 chrU 2760929 2761188 -7287849 + DMCR1A LINE CR1 2092 2386 -2084 6 606 661 172 19 19 chrU 2761216 2761370 -7287667 - DNAREP1_DM LINE Penelope -318 276 123 6 606 499 206 174 8 chrU 2761409 2761541 -7287496 + DMCR1A LINE CR1 2708 2861 -1609 6 606 7437 166 111 65 chrU 2761839 2763529 -7285508 - Gypsy_I LTR Gypsy -1702 4805 3037 6 606 4052 212 75 14 chrU 2763527 2764664 -7284373 - Gypsy_I LTR Gypsy -4269 3253 1595 6 606 330 252 212 44 chrU 2764659 2764796 -7284241 - Gypsy_I LTR Gypsy -5287 1220 1061 6 606 671 235 59 0 chrU 2764806 2764993 -7284044 - Gypsy_I LTR Gypsy -5718 789 592 6 606 2440 269 75 33 chrU 2764985 2766021 -7283016 - G_DM LINE Jockey 0 4346 3267 6 606 1185 291 149 14 chrU 2766077 2767089 -7281948 - G2_DM LINE Jockey -1616 1486 282 6 606 2067 145 20 17 chrU 2767097 2767580 -7281457 + HELENA_RT LINE Jockey 1025 1317 0 6 606 4568 98 32 0 chrU 2767578 2768241 -7280796 + Gypsy_I LTR Gypsy 566 1249 -5258 6 606 3112 110 146 0 chrU 2768238 2768774 -7280263 + Gypsy_I LTR Gypsy 1664 2277 -4230 6 606 249 350 17 17 chrU 2768812 2768992 -7280045 - BS LINE Jockey -1551 3575 3396 6 606 794 126 22 28 chrU 2769079 2769258 -7279779 + GA-rich Low_complexity Low_complexity 2 179 0 6 606 1620 0 0 0 chrU 2769362 2769663 -7279374 + (GAGAA)n Simple_repeat Simple_repeat 1 301 0 6 606 264 330 42 42 chrU 2769715 2769927 -7279110 - BS LINE Jockey -4570 556 345 6 606 342 183 35 35 chrU 2770039 2770124 -7278913 - BS2 LINE Jockey -4474 247 163 6 606 1808 152 32 24 chrU 2770205 2770577 -7278460 - Gypsy_LTR LTR Gypsy -107 375 1 6 606 4999 137 72 5 chrU 2770577 2771451 -7277586 - Gypsy_I LTR Gypsy -421 6086 5154 6 606 5482 169 76 0 chrU 2771445 2772449 -7276588 - Gypsy_I LTR Gypsy -2533 3974 2895 6 606 1502 94 141 0 chrU 2772448 2772682 -7276355 - Gypsy_I LTR Gypsy -3715 2792 2526 6 606 288 289 132 7 chrU 2772775 2772911 -7276126 + BS LINE Jockey 3307 3459 -1667 6 606 2977 171 55 0 chrU 2772913 2773458 -7275579 - Gypsy_I LTR Gypsy -3038 3469 2895 6 606 1502 94 141 0 chrU 2773457 2773691 -7275346 - Gypsy_I LTR Gypsy -3715 2792 2526 6 606 1650 227 68 7 chrU 2773784 2774355 -7274682 + HELENA_RT LINE Jockey 39 316 -1001 6 606 618 91 162 0 chrU 2774368 2774467 -7274570 + HELENA_RT LINE Jockey 429 543 -774 6 606 3169 212 80 2 chrU 2774549 2775583 -7273454 + G6_DM LINE Jockey 748 1851 -2495 6 606 1366 150 268 2 chrU 2775839 2776242 -7272795 + DMCR1A LINE CR1 2114 2624 -1846 6 606 231 94 0 0 chrU 2776242 2776274 -7272763 - DNAREP1_DM LINE Penelope 0 594 563 6 606 559 200 73 17 chrU 2776307 2776485 -7272552 - DNAREP1_DM LINE Penelope -259 335 148 6 606 484 200 192 0 chrU 2776474 2776594 -7272443 + DMCR1A LINE CR1 2719 2861 -1609 6 606 342 297 122 44 chrU 2778094 2778323 -7270714 + Copia2_I LTR Copia 1800 2046 -2116 6 606 433 246 0 17 chrU 2778791 2778907 -7270130 + FROGGER_I LTR Copia 643 756 -1321 6 606 314 288 90 19 chrU 2779001 2779157 -7269880 + BS LINE Jockey 89 255 -4871 6 606 394 331 93 43 chrU 2779203 2779579 -7269458 + BS LINE Jockey 345 739 -4387 6 606 1260 132 5 10 chrU 2779829 2780028 -7269009 + HMSBEAGLE_I LTR Gypsy 162 359 -6170 6 606 63 36 0 0 chrU 2780048 2780132 -7268905 + AT_rich Low_complexity Low_complexity 1 84 0 6 606 344 230 40 0 chrU 2780264 2780338 -7268699 + HMSBEAGLE_I LTR Gypsy 1212 1288 -5241 6 606 2704 135 216 7 chrU 2780336 2781017 -7268020 + HMSBEAGLE_I LTR Gypsy 1619 2441 -4088 6 606 423 20 0 0 chrU 2781122 2781172 -7267865 - DMRT1A LINE R1 -140 5043 4994 6 606 5596 42 56 5 chrU 2781512 2782257 -7266780 - G4_DM LINE Jockey 0 3856 3074 6 606 1379 68 190 0 chrU 2782262 2782467 -7266570 + PROTOP DNA P 4237 4480 0 6 606 22 0 0 0 chrU 2782763 2782785 -7266252 + AT_rich Low_complexity Low_complexity 1 22 0 6 606 21 71 0 0 chrU 2783069 2783111 -7265926 + AT_rich Low_complexity Low_complexity 1 42 0 6 606 4739 0 0 0 chrU 2783111 2783629 -7265408 - NOMAD_LTR LTR Gypsy 0 518 1 6 606 1825 0 5 0 chrU 2783629 2783832 -7265205 - NOMAD_I LTR Gypsy 0 6572 6369 6 606 4739 4 0 0 chrU 2789680 2790218 -7258819 - NOMAD_LTR LTR Gypsy 0 518 1 6 606 231 132 37 19 chrU 2790294 2790348 -7258689 + (TTATA)n Simple_repeat Simple_repeat 3 57 0 6 606 256 189 13 13 chrU 2791743 2791818 -7257219 + DNAREP1_DM LINE Penelope 215 289 -305 6 606 46 0 0 0 chrU 2792441 2792487 -7256550 + AT_rich Low_complexity Low_complexity 1 46 0 6 606 244 217 100 0 chrU 2792861 2792921 -7256116 + DNAREP1_DM LINE Penelope 7 72 -522 6 606 779 161 21 27 chrU 2792941 2793182 -7255855 + DNAREP1_DM LINE Penelope 117 332 -262 6 606 721 89 18 9 chrU 2793181 2793294 -7255743 + DNAREP1_DM LINE Penelope 187 300 -294 6 606 750 131 99 46 chrU 2793296 2793448 -7255589 + DNAREP1_DM LINE Penelope 435 594 0 6 606 352 125 0 0 chrU 2793631 2793687 -7255350 - DM297_LTR LTR Gypsy -130 284 229 6 606 610 160 132 44 chrU 2793694 2793872 -7255165 - DM297_LTR LTR Gypsy -254 253 1 6 606 572 107 87 10 chrU 2793872 2793976 -7255061 - DM297_I LTR Gypsy 0 6167 6056 6 606 374 21 0 0 chrU 2794386 2794434 -7254603 - DM297_I LTR Gypsy -2260 3907 3860 6 606 2012 67 0 0 chrU 2794440 2794722 -7254315 - DM297_I LTR Gypsy -2439 3728 3447 6 606 338 282 84 28 chrU 2795278 2795457 -7253580 + Mariner_DMA DNA Tc1 736 924 -362 6 606 2602 102 7 3 chrU 2795749 2796133 -7252904 - DM297_I LTR Gypsy -2765 3402 3059 6 606 1917 81 144 0 chrU 2796126 2796424 -7252613 - DM297_I LTR Gypsy -3533 2634 2294 6 606 7289 58 109 2 chrU 2796457 2797810 -7251227 - DMCR1A LINE CR1 -284 4186 2690 6 606 2772 70 107 37 chrU 2797808 2798574 -7250463 - DMCR1A LINE CR1 -2138 2332 1513 6 606 4719 62 140 18 chrU 2798593 2799442 -7249595 - DMCR1A LINE CR1 -3401 1069 117 6 606 472 62 0 0 chrU 2799430 2799494 -7249543 - DM297_I LTR Gypsy -5312 855 792 6 606 1344 59 0 0 chrU 2799507 2799676 -7249361 + DM297_I LTR Gypsy 612 780 -5387 6 606 295 159 29 0 chrU 2800584 2800653 -7248384 - DNAREP1_DM LINE Penelope -380 214 144 6 606 181 57 28 28 chrU 2800733 2800769 -7248268 + (TTTTTA)n Simple_repeat Simple_repeat 1 36 0 6 606 263 29 0 28 chrU 2800787 2800823 -7248214 - DNAREP1_DM LINE Penelope 0 594 560 6 606 705 219 7 151 chrU 2801117 2801396 -7247641 - R1_DM LINE R1 -4988 368 130 6 606 1269 139 65 33 chrU 2801516 2801820 -7247217 - DNAREP1_DM LINE Penelope -195 399 117 6 606 5255 52 123 10 chrU 2801832 2803095 -7245942 - DMCR1A LINE CR1 -3061 1409 5 6 606 1203 102 76 0 chrU 2803119 2803316 -7245721 - DM297_I LTR Gypsy -4616 1551 1340 6 606 2385 69 33 36 chrU 2807648 2808011 -7241026 - DMCR1A LINE CR1 -4104 366 5 6 606 3913 97 103 14 chrU 2808035 2808735 -7240302 - DM297_I LTR Gypsy -4616 1551 790 6 606 3435 178 95 7 chrU 2808840 2810011 -7239026 + ROVER-I_DM LTR Gypsy 4035 5308 -1276 6 606 1643 169 128 5 chrU 2810046 2810461 -7238576 + ROVER-I_DM LTR Gypsy 5990 6455 -129 6 606 1843 122 44 36 chrU 2810676 2811040 -7237997 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 606 846 186 49 123 chrU 2811040 2811488 -7237549 + ROVER-I_DM LTR Gypsy 1 415 -6169 6 606 8845 235 71 14 chrU 2811501 2813935 -7235102 + ROVER-I_DM LTR Gypsy 1006 3577 -3007 6 606 2200 19 4 0 chrU 2817981 2818247 -7230790 + FW_DM LINE Jockey 4424 4690 -2 6 606 8491 174 6 8 chrU 2818245 2819782 -7229255 + ROVER-I_DM LTR Gypsy 3775 5308 -1276 6 606 1491 165 46 11 chrU 2819819 2820354 -7228683 + ROVER-I_DM LTR Gypsy 5992 6584 0 6 606 1881 117 44 36 chrU 2820354 2820718 -7228319 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 606 875 188 65 96 chrU 2820718 2821135 -7227902 + ROVER-I_DM LTR Gypsy 1 404 -6180 6 606 15255 224 26 11 chrU 2821181 2824710 -7224327 + ROVER-I_DM LTR Gypsy 1006 4587 -1997 6 606 5071 160 1 2 chrU 2830951 2831801 -7217236 + ROVER-I_DM LTR Gypsy 4460 5308 -1276 6 606 2637 163 40 9 chrU 2831836 2832413 -7216624 + ROVER-I_DM LTR Gypsy 5990 6584 0 6 606 1870 125 41 33 chrU 2832413 2832777 -7216260 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 606 408 159 68 0 chrU 2832777 2832865 -7216172 + ROVER-I_DM LTR Gypsy 1 94 -6490 6 606 183 80 0 0 chrU 2832886 2832911 -7216126 + (A)n Simple_repeat Simple_repeat 1 25 0 6 606 18517 107 38 31 chrU 2832967 2836298 -7212739 - TAHRE LINE telomeric -3826 10651 5876 6 606 7892 185 4 1 chrU 2836401 2837846 -7211191 + ROVER-I_DM LTR Gypsy 3518 4966 -1618 6 606 9562 14 1 0 chrU 2837846 2838950 -7210087 - PROTOP_A DNA P 0 1105 1 6 606 1987 148 6 0 chrU 2838950 2839289 -7209748 + ROVER-I_DM LTR Gypsy 4957 5297 -1287 6 606 2493 161 45 9 chrU 2839342 2839875 -7209162 + ROVER-I_DM LTR Gypsy 6032 6583 -1 6 606 1542 62 35 13 chrU 2839877 2840106 -7208931 + ROVER-LTR_DM LTR Gypsy 1 234 -133 6 606 1352 152 128 15 chrU 2842327 2842601 -7206436 - DNAREP1_DM LINE Penelope 0 594 290 6 606 353 157 71 0 chrU 2842625 2842695 -7206342 - DNAREP1_DM LINE Penelope -1 593 519 6 606 362 327 0 0 chrU 2844908 2845070 -7203967 + MDG3_I LTR Gypsy 3263 3424 -1562 6 606 7181 24 7 37 chrU 2845972 2846940 -7202097 + FB4_DM DNA Tc1 3151 4089 0 6 606 487 51 72 48 chrU 2846940 2846988 -7202049 - PROTOP DNA P -3142 1338 1289 6 606 3747 22 37 0 chrU 2846985 2847443 -7201594 - PROTOP DNA P -4005 475 1 6 606 316 188 31 0 chrU 2847459 2847523 -7201514 - NINJA_I LTR Pao -1377 4634 4569 6 606 357 125 0 0 chrU 2847902 2847958 -7201079 - Gypsy5_I LTR Gypsy 0 6509 6454 6 606 257 324 51 46 chrU 2848488 2849210 -7199827 - Gypsy5_I LTR Gypsy -586 5923 5198 6 606 352 314 0 0 chrU 2849498 2849657 -7199380 - Gypsy5_I LTR Gypsy -1634 4875 4717 6 606 4440 331 40 39 chrU 2849753 2853731 -7195306 - Gypsy5_I LTR Gypsy -2033 4476 494 6 606 254 209 35 11 chrU 2854301 2854388 -7194649 + (TTTA)n Simple_repeat Simple_repeat 2 90 0 6 606 259 121 47 35 chrU 2854965 2855051 -7193986 + (TTTA)n Simple_repeat Simple_repeat 2 88 0 6 606 831 96 48 0 chrU 2855719 2855844 -7193193 - NINJA_I LTR Pao -1779 4232 4102 6 606 477 169 0 0 chrU 2855852 2855935 -7193102 - NINJA_I LTR Pao -2101 3910 3828 6 606 2673 86 62 0 chrU 2855924 2856308 -7192729 - NINJA_I LTR Pao -2424 3587 3180 6 606 805 122 233 44 chrU 2856294 2856474 -7192563 - NINJA_I LTR Pao -3154 2857 2644 6 606 1091 143 166 4 chrU 2856457 2856692 -7192345 - NINJA_I LTR Pao -3618 2393 2121 6 606 1155 182 153 0 chrU 2856696 2856938 -7192099 - NINJA_I LTR Pao -4112 1899 1621 6 606 6903 39 34 25 chrU 2856941 2857848 -7191189 - DMCR1A LINE CR1 0 4470 3556 6 606 1374 20 150 0 chrU 2860975 2861175 -7187862 - DMCR1A LINE CR1 -3640 830 601 6 606 5408 42 62 17 chrU 2861188 2861912 -7187125 - DMCR1A LINE CR1 -3713 757 1 6 606 452 119 107 0 chrU 2861922 2862006 -7187031 - NINJA_I LTR Pao -4397 1614 1522 6 606 3510 117 109 4 chrU 2862004 2862641 -7186396 - NINJA_I LTR Pao -4598 1413 591 6 606 11558 7 1 1 chrU 2863358 2864658 -7184379 - FW_DM LINE Jockey -3392 1300 1 6 606 437 175 110 30 chrU 2864729 2864829 -7184208 + Gypsy12_LTR LTR Gypsy 327 434 -1902 6 606 5885 206 69 46 chrU 2864832 2866538 -7182499 + Gypsy12_LTR LTR Gypsy 570 2313 -23 6 606 971 230 243 20 chrU 2866550 2866953 -7182084 + TAHRE LINE telomeric 9807 10299 -164 6 606 6680 91 26 76 chrU 2867076 2868268 -7180769 + PROTOP_B DNA P 1 1132 -21 6 606 6963 77 46 22 chrU 2870281 2871360 -7177677 + PROTOP_A DNA P 1 1105 0 6 606 21 36 0 0 chrU 2873227 2873255 -7175782 + AT_rich Low_complexity Low_complexity 1 28 0 6 606 1002 161 83 0 chrU 2874378 2874558 -7174479 - Invader1_I LTR Gypsy -1563 1623 1429 6 606 1487 238 48 14 chrU 2874556 2874974 -7174063 - Invader5_I LTR Gypsy -1669 1665 1234 6 606 1248 279 22 15 chrU 2875004 2875463 -7173574 - Invader6_I LTR Gypsy -2252 1847 1386 6 606 3499 181 178 10 chrU 2875539 2876663 -7172374 - Invader1_I LTR Gypsy -1872 1314 1 6 606 303 248 129 109 chrU 2876688 2876991 -7172046 - Invader1_LTR LTR Gypsy -31 392 84 6 606 246 246 14 0 chrU 2877492 2877561 -7171476 - Copia_I LTR Copia -95 4498 4429 6 606 681 315 23 11 chrU 2877895 2878155 -7170882 + NINJA_I LTR Pao 1027 1289 -4722 6 606 311 291 9 9 chrU 2878222 2878333 -7170704 + NINJA_I LTR Pao 2472 2582 -3429 6 606 1677 301 8 14 chrU 2878348 2878934 -7170103 + NINJA_I LTR Pao 2757 3339 -2672 6 606 2928 282 18 16 chrU 2879047 2880251 -7168786 - Copia_I LTR Copia -516 4077 2871 6 606 1095 278 8 6 chrU 2881097 2881459 -7167578 - Copia_I LTR Copia -2463 2130 1768 6 606 316 304 46 72 chrU 2881516 2882040 -7166997 - Copia_I LTR Copia -2982 1611 1102 6 606 1013 316 48 12 chrU 2882497 2883058 -7165979 - Copia_I LTR Copia -3857 736 156 6 607 3216 318 17 19 chrU 2883662 2885060 -7163977 - MICROPIA_I LTR Gypsy -622 3854 2560 6 607 4093 323 31 45 chrU 2885160 2887556 -7161481 - MICROPIA_I LTR Gypsy -2113 2363 1 6 607 268 330 24 93 chrU 2887583 2887830 -7161207 - ACCORD2_I LTR Gypsy -6457 755 526 6 607 890 354 42 20 chrU 2887870 2888374 -7160663 + Copia_I LTR Copia 3406 3920 -673 6 607 456 77 190 10 chrU 2888543 2888671 -7160366 - TART LINE telomeric -3998 10479 10370 6 607 666 169 12 49 chrU 2888750 2888912 -7160125 + Gypsy3_LTR LTR Gypsy 31 186 -212 6 607 2026 35 6 92 chrU 2888908 2889222 -7159815 + BATUMI_I LTR Pao 6998 7284 -679 6 607 3180 75 0 7 chrU 2889222 2889639 -7159398 - ACCORD2_I LTR Gypsy -4486 2726 2313 6 607 2629 63 14 0 chrU 2889739 2890087 -7158950 + IDEFIX_I LTR Gypsy 4596 4948 -680 6 607 1672 58 0 4 chrU 2890078 2890304 -7158733 + IDEFIX_I LTR Gypsy 780 1004 -4624 6 607 229 262 0 0 chrU 2890573 2890634 -7158403 - MDG3_I LTR Gypsy -390 4596 4536 6 607 314 366 33 16 chrU 2890920 2891223 -7157814 - Invader3_I LTR Gypsy -598 4290 3983 6 607 264 281 11 11 chrU 2892225 2892315 -7156722 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 6 607 19254 1 0 1 chrU 2893670 2895756 -7153281 + POGO DNA Pogo 1 2084 -37 6 607 5774 80 44 6 chrU 2899779 2900628 -7148409 - BATUMI_I LTR Pao -1119 6795 5677 6 607 10475 116 27 11 chrU 2900620 2902883 -7146154 - BATUMI_I LTR Pao -2759 5204 3019 6 607 10577 45 50 38 chrU 2902884 2904410 -7144627 - BATUMI_I LTR Pao -6418 1545 1 6 607 1556 107 3 69 chrU 2904412 2904703 -7144334 - BATUMI_LTR LTR Pao 0 272 1 6 607 1220 51 0 0 chrU 2904703 2904858 -7144179 + IDEFIX_I LTR Gypsy 5387 5541 -87 6 607 3023 40 24 5 chrU 2904859 2905241 -7143796 + IDEFIX_LTR LTR Gypsy 206 594 0 6 607 24 0 0 0 chrU 2905432 2905456 -7143581 + AT_rich Low_complexity Low_complexity 1 24 0 6 607 3215 58 12 0 chrU 2912768 2913185 -7135852 + IDEFIX_I LTR Gypsy 4527 4948 -680 6 607 19239 50 8 2 chrU 2913176 2915537 -7133500 + IDEFIX_I LTR Gypsy 780 3154 -2474 6 607 20056 49 35 1 chrU 2915642 2918254 -7130783 + IDEFIX_I LTR Gypsy 2858 5557 -71 6 607 23 0 0 0 chrU 2918479 2918502 -7130535 + AT_rich Low_complexity Low_complexity 1 23 0 6 607 3417 29 0 0 chrU 2920101 2920486 -7128551 - DIVER2_LTR LTR Pao 0 385 1 6 607 3514 42 12 0 chrU 2920486 2920910 -7128127 - DIVER2_I LTR Pao 0 4147 3719 6 607 2796 44 3 64 chrU 2920885 2921275 -7127762 - DIVER2_I LTR Pao -2570 1577 1212 6 607 308 237 0 26 chrU 2926948 2927026 -7122011 - BS2 LINE Jockey -498 4223 4148 6 607 2099 314 16 22 chrU 2937591 2938466 -7110571 - Invader6_I LTR Gypsy -1504 2595 1726 6 607 467 315 39 41 chrU 2938694 2939065 -7109972 - Invader6_I LTR Gypsy -3234 1242 888 6 607 369 282 30 8 chrU 2939117 2939249 -7109788 - Invader4_I LTR Gypsy -2278 135 1 6 607 1264 44 6 12 chrU 2939936 2940096 -7108941 + DIVER2_LTR LTR Pao 227 385 0 6 607 2377 15 15 0 chrU 2940490 2940750 -7108287 + STALKER4_LTR LTR Gypsy 1 264 -138 6 607 2752 22 0 0 chrU 2940750 2941064 -7107973 - DM176_LTR LTR Gypsy 0 507 194 6 607 8461 165 26 12 chrU 2941164 2942861 -7106176 + DMRT1B LINE R1 3437 5174 -9 6 607 1433 283 87 64 chrU 2943104 2944021 -7105016 + DMRT1A LINE R1 3 940 -4243 6 607 663 267 116 11 chrU 2944115 2944562 -7104475 + DMRT1A LINE R1 1272 1788 -3395 6 607 2787 213 22 14 chrU 2944590 2945167 -7103870 + DMRT1A LINE R1 2037 2618 -2565 6 607 1368 178 0 0 chrU 2945168 2945398 -7103639 + DMRT1A LINE R1 2725 2954 -2229 6 607 672 189 16 0 chrU 2945420 2945547 -7103490 + DMRT1A LINE R1 3043 3171 -2012 6 607 2445 184 80 2 chrU 2945546 2945849 -7103188 + DMRT1A LINE R1 3300 3639 -1544 6 607 189 74 0 0 chrU 2945849 2945876 -7103161 + (CATA)n Simple_repeat Simple_repeat 3 29 0 6 607 2445 210 206 1 chrU 2945876 2946385 -7102652 + DMRT1A LINE R1 3640 4240 -943 6 607 8815 19 25 3 chrU 2950222 2951936 -7097101 - SSU-rRNA_Dme rRNA rRNA -245 1750 1 6 607 33 0 0 0 chrU 2952067 2952100 -7096937 + AT_rich Low_complexity Low_complexity 1 33 0 6 607 21 104 0 0 chrU 2952189 2952266 -7096771 + AT_rich Low_complexity Low_complexity 1 77 0 6 607 26 50 0 0 chrU 2952423 2952463 -7096574 + AT_rich Low_complexity Low_complexity 1 40 0 6 607 1302 168 0 26 chrU 2952689 2952921 -7096116 - DMLTR5 LTR Gypsy -1 265 40 6 607 23 0 0 0 chrU 2953125 2953148 -7095889 + AT_rich Low_complexity Low_complexity 1 23 0 6 607 1777 301 88 48 chrU 2953272 2954673 -7094364 - G_DM LINE Jockey -272 4074 1350 6 607 860 299 35 30 chrU 2955165 2955534 -7093503 - G6_DM LINE Jockey -705 1337 967 6 607 3892 86 42 5 chrU 2956203 2956776 -7092261 - IDEFIX_LTR LTR Gypsy 0 594 1 6 607 250 125 0 0 chrU 2956745 2956785 -7092252 + BARI1 DNA Tc1 4 43 -1707 6 607 2295 15 7 11 chrU 2956787 2957063 -7091974 - BLASTOPIA_LTR LTR Gypsy 0 275 1 6 607 10982 1 2 0 chrU 2957063 2958249 -7090788 - BLASTOPIA_I LTR Gypsy 0 4481 3293 6 607 15837 1 1 0 chrU 2960213 2961930 -7087107 - BLASTOPIA_I LTR Gypsy -2763 1718 1 6 607 2295 15 7 11 chrU 2961930 2962206 -7086831 - BLASTOPIA_LTR LTR Gypsy 0 275 1 6 607 874 99 0 161 chrU 2962221 2962414 -7086623 - NTS_DM Other Other -78 162 1 6 607 1012 39 25 25 chrU 2962414 2962574 -7086463 - NTS_DM Other Other 0 240 81 6 607 938 222 36 5 chrU 2962576 2962798 -7086239 - MICROPIA_LTR LTR Gypsy 0 476 248 6 607 678 97 23 171 chrU 2962801 2962976 -7086061 - MICROPIA_LTR LTR Gypsy -172 304 156 6 607 228 103 77 0 chrU 2962958 2962997 -7086040 - MICROPIA_LTR LTR Gypsy -434 42 1 6 607 3432 111 11 101 chrU 2962997 2963651 -7085386 - MICROPIA_I LTR Gypsy 0 4476 3882 6 607 6405 40 36 2 chrU 2963676 2964472 -7084565 - TRANSIB2 DNA Transib -995 1849 1027 6 607 4195 47 71 5 chrU 2964500 2965077 -7083960 - TRANSIB2 DNA Transib -2222 622 8 6 607 1857 87 63 19 chrU 2965084 2965353 -7083684 - MICROPIA_I LTR Gypsy -1027 3449 3169 6 607 1197 157 16 29 chrU 2965355 2965572 -7083465 + Gypsy8_LTR LTR Gypsy 1 214 -90 6 607 1348 128 8 45 chrU 2965572 2965817 -7083220 + Gypsy8_I LTR Gypsy 1 236 -4111 6 607 527 280 118 43 chrU 2966265 2966519 -7082518 - G6_DM LINE Jockey -1705 337 65 6 607 8097 7 0 0 chrU 2966655 2967597 -7081440 + DM176_I LTR Gypsy 5252 6193 -227 6 607 4540 4 0 0 chrU 2967615 2968107 -7080930 + FW_DM LINE Jockey 556 1047 -3645 6 607 4861 29 2 0 chrU 2976281 2976831 -7072206 + Gypsy3_I LTR Gypsy 1003 1553 -4624 6 607 12537 159 94 77 chrU 2976843 2980198 -7068839 + Gypsy3_I LTR Gypsy 1866 5277 -900 6 607 2446 8 0 0 chrU 2980198 2980464 -7068573 - Invader2_LTR LTR Gypsy 0 266 1 6 607 10610 4 0 1 chrU 2980464 2981676 -7067361 - Invader2_I LTR Gypsy 0 4592 3382 6 607 657 12 12 0 chrU 2985086 2985167 -7063870 - Invader2_I LTR Gypsy -4510 82 1 6 607 2473 4 0 0 chrU 2985167 2985433 -7063604 - Invader2_LTR LTR Gypsy 0 266 1 6 607 5277 142 11 6 chrU 2985433 2986467 -7062570 + Gypsy3_I LTR Gypsy 5274 7012 0 6 607 2392 88 37 39 chrU 2986469 2986877 -7062160 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 607 391 292 0 0 chrU 2986934 2987040 -7061997 - Copia2_I LTR Copia -3490 672 567 6 607 44 0 0 0 chrU 2987802 2987846 -7061191 + AT_rich Low_complexity Low_complexity 1 44 0 6 607 24 0 0 0 chrU 2989654 2989678 -7059359 + AT_rich Low_complexity Low_complexity 1 24 0 6 607 2473 4 0 0 chrU 2990215 2990481 -7058556 + Invader2_LTR LTR Gypsy 1 266 0 6 607 7033 7 75 0 chrU 2990481 2991320 -7057717 + Invader2_I LTR Gypsy 1 902 -3690 6 607 4938 18 0 12 chrU 2991297 2991876 -7057161 + Invader2_I LTR Gypsy 1060 1631 -2961 6 607 1085 0 0 0 chrU 2991976 2992095 -7056942 - ACCORD_I LTR Gypsy -3135 3153 3035 6 607 4938 14 11 6 chrU 2992072 2993087 -7055950 - ACCORD_I LTR Gypsy -5510 778 1 6 607 3896 2 146 0 chrU 2993087 2993574 -7055463 - ACCORD_LTR LTR Gypsy 0 558 1 6 607 2397 207 19 4 chrU 2993574 2994055 -7054982 + Gypsy_I LTR Gypsy 5972 6459 -48 6 607 1234 185 63 63 chrU 2994040 2994421 -7054616 + Gypsy_LTR LTR Gypsy 56 436 -46 6 607 1527 53 16 0 chrU 2994464 2994653 -7054384 + PROTOP_B DNA P 962 1153 0 6 607 244 266 61 103 chrU 2994927 2995334 -7053703 - I_DM LINE I -2339 3892 3503 6 607 650 117 166 14 chrU 2995374 2995513 -7053524 + DNAREP1_DM LINE Penelope 226 385 -209 6 607 632 122 203 0 chrU 2995517 2995640 -7053397 + DNAREP1_DM LINE Penelope 290 437 -157 6 607 6773 29 1 0 chrU 2995640 2996413 -7052624 - R1_DM LINE R1 0 5356 4583 6 607 6902 7 0 0 chrU 2996417 2997183 -7051854 + DMRT1B LINE R1 561 1326 -3857 6 607 32380 33 8 3 chrU 3002183 3006287 -7042750 - R1_DM LINE R1 -1233 4123 1 6 607 920 61 106 20 chrU 3006314 3006465 -7042572 + DNAREP1_DM LINE Penelope 431 594 0 6 607 30 0 0 0 chrU 3006717 3006747 -7042290 + AT_rich Low_complexity Low_complexity 1 30 0 6 607 1393 139 185 26 chrU 3007174 3007477 -7041560 - DMRT1B LINE R1 -18 5165 4815 6 607 419 117 457 68 chrU 3007987 3008196 -7040841 + Gypsy_LTR LTR Gypsy 147 436 -46 6 607 1389 58 16 0 chrU 3008239 3008428 -7040609 + PROTOP_B DNA P 962 1153 0 6 607 577 112 169 15 chrU 3009159 3009295 -7039742 + DNAREP1_DM LINE Penelope 226 382 -212 6 607 1698 76 104 11 chrU 3009302 3009581 -7039456 + DNAREP1_DM LINE Penelope 290 594 0 6 607 30 0 0 0 chrU 3009837 3009867 -7039170 + AT_rich Low_complexity Low_complexity 1 30 0 6 607 21 0 0 0 chrU 3010564 3010585 -7038452 + AT_rich Low_complexity Low_complexity 1 21 0 6 607 1409 139 186 20 chrU 3011279 3011580 -7037457 - DMRT1B LINE R1 -18 5165 4815 6 607 879 142 76 76 chrU 3012235 3012525 -7036512 + Gypsy_LTR LTR Gypsy 147 436 -46 6 607 1132 58 116 0 chrU 3012568 3012740 -7036297 + PROTOP_B DNA P 962 1153 0 6 607 577 112 169 15 chrU 3013474 3013610 -7035427 + DNAREP1_DM LINE Penelope 226 382 -212 6 607 1698 76 104 11 chrU 3013617 3013896 -7035141 + DNAREP1_DM LINE Penelope 290 594 0 6 607 30 0 0 0 chrU 3014152 3014182 -7034855 + AT_rich Low_complexity Low_complexity 1 30 0 6 608 393 318 45 38 chrU 3015734 3016025 -7033012 - Gypsy4_I LTR Gypsy -2815 3473 3181 6 608 252 196 0 0 chrU 3016010 3016066 -7032971 - DM297_I LTR Gypsy -3740 2427 2372 6 608 3431 23 9 2 chrU 3017921 3018358 -7030679 - TRANSIB2 DNA Transib 0 2844 2405 6 608 9236 28 7 1 chrU 3018357 3019519 -7029518 - TRANSIB2 DNA Transib -1675 1169 1 6 608 339 304 20 20 chrU 3021362 3021510 -7027527 - Gypsy3_I LTR Gypsy -4812 1365 1218 6 608 27 29 0 0 chrU 3022019 3022053 -7026984 + AT_rich Low_complexity Low_complexity 1 34 0 6 608 201 39 0 0 chrU 3022306 3022332 -7026705 + (T)n Simple_repeat Simple_repeat 1 26 0 6 608 40 21 0 0 chrU 3022614 3022661 -7026376 + AT_rich Low_complexity Low_complexity 1 47 0 6 608 2190 25 0 27 chrU 3022662 3022955 -7026082 - BATUMI_I LTR Pao -677 7286 7002 6 608 526 160 31 80 chrU 3023262 3023422 -7025615 + DNAREP1_DM LINE Penelope 104 255 -339 6 608 1295 158 62 35 chrU 3023422 3023795 -7025242 + DNAREP1_DM LINE Penelope 1 331 -263 6 608 1282 83 123 1 chrU 3023912 3024133 -7024904 + DOC4_DM LINE Jockey 1 381 -4412 6 608 5561 245 21 18 chrU 3024163 3026141 -7022896 + QUASIMODO_I LTR Gypsy 3927 5910 -150 6 608 4096 27 13 0 chrU 3026241 3026764 -7022273 - PROTOP_A DNA P 0 1105 576 6 608 2788 81 81 2 chrU 3026748 3027144 -7021893 - PROTOP_A DNA P -678 427 1 6 608 186 43 0 0 chrU 3027189 3027212 -7021825 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 608 285 150 132 36 chrU 3027228 3027311 -7021726 + QUASIMODO_LTR LTR Gypsy 423 513 -145 6 608 27 73 0 0 chrU 3027340 3027395 -7021642 + AT_rich Low_complexity Low_complexity 1 55 0 6 608 28 0 0 0 chrU 3027406 3027434 -7021603 + AT_rich Low_complexity Low_complexity 1 28 0 6 608 229 111 0 0 chrU 3027436 3027472 -7021565 + DOC4_DM LINE Jockey 1840 1875 -916 6 608 480 154 239 0 chrU 3027490 3027607 -7021430 - HETRP_DM Satellite Satellite -1145 727 583 6 608 844 182 5 37 chrU 3027516 3027704 -7021333 + Invader4_LTR LTR Gypsy 165 346 0 6 608 4656 100 107 5 chrU 3027711 3028563 -7020474 + Invader4_I LTR Gypsy 50 1028 -1385 6 608 608 135 0 0 chrU 3028748 3028852 -7020185 + Invader4_I LTR Gypsy 1031 1134 -1279 6 608 620 293 31 17 chrU 3028969 3029383 -7019654 + Invader6_I LTR Gypsy 2899 3121 -978 6 608 657 212 6 0 chrU 3029473 3029656 -7019381 + Invader4_I LTR Gypsy 1490 1579 -834 6 608 313 119 0 95 chrU 3029758 3029832 -7019205 + Invader4_I LTR Gypsy 1668 1734 -679 6 608 349 303 33 29 chrU 3030176 3030421 -7018616 - BLASTOPIA_I LTR Gypsy -15 4466 4221 6 608 325 289 29 69 chrU 3030527 3030731 -7018306 + Invader1_LTR LTR Gypsy 84 279 -144 6 608 366 225 0 11 chrU 3030779 3030869 -7018168 + Invader1_I LTR Gypsy 55 143 -3043 6 608 5936 25 0 0 chrU 3030883 3031606 -7017431 + NINJA_I LTR Pao 1096 1818 -4193 6 608 5514 21 0 1 chrU 3033874 3034553 -7014484 + NINJA_I LTR Pao 5334 6011 0 6 608 2318 48 3 28 chrU 3034553 3034877 -7014160 + NINJA_LTR LTR Pao 1 316 -1 6 608 1135 152 0 10 chrU 3034877 3035076 -7013961 + Invader1_I LTR Gypsy 136 332 -2854 6 608 4691 177 5 20 chrU 3035076 3035963 -7013074 + Invader1_I LTR Gypsy 442 1314 -1872 6 608 314 218 0 0 chrU 3035983 3036061 -7012976 + Invader5_I LTR Gypsy 1155 1232 -2102 6 608 469 219 9 0 chrU 3036061 3036175 -7012862 + Invader5_I LTR Gypsy 1320 1423 -1911 6 608 198 87 65 0 chrU 3036248 3036294 -7012743 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 608 230 62 0 0 chrU 3036470 3036484 -7012553 + STALKER4_I LTR Gypsy 14 27 -6503 6 608 1137 89 28 56 chrU 3036484 3036698 -7012339 + MDG1_I LTR Gypsy 1 208 -6388 6 608 234 214 72 72 chrU 3036752 3036863 -7012174 + Gypsy11_I LTR Gypsy 538 648 -2876 6 608 1110 184 110 37 chrU 3036866 3037385 -7011652 + MDG1_I LTR Gypsy 686 1242 -5354 6 608 1410 118 114 10 chrU 3037552 3037842 -7011195 + MDG1_I LTR Gypsy 1217 1536 -5060 6 608 827 80 0 0 chrU 3037836 3037961 -7011076 + MDG1_I LTR Gypsy 2539 2663 -3933 6 608 3549 21 2 0 chrU 3037963 3038390 -7010647 + ROO_LTR LTR Pao 1 428 0 6 608 6386 20 115 29 chrU 3038390 3039319 -7009718 + ROO_I LTR Pao 1 1009 -7247 6 608 1006 47 0 0 chrU 3039420 3039549 -7009488 + TRANSIB2 DNA Transib 890 1018 -1826 6 608 1156 72 4 0 chrU 3039581 3039819 -7009218 + TRANSIB2 DNA Transib 1219 1510 -1334 6 608 2310 81 42 3 chrU 3039835 3040195 -7008842 + TRANSIB2 DNA Transib 2471 2844 0 6 608 25 0 0 0 chrU 3040670 3040695 -7008342 + AT_rich Low_complexity Low_complexity 1 25 0 6 608 3936 52 18 14 chrU 3042061 3042628 -7006409 - IDEFIX_LTR LTR Gypsy 0 594 26 6 608 478 278 13 13 chrU 3043028 3043254 -7005783 - Copia_I LTR Copia -2314 2279 2054 6 608 1146 254 0 0 chrU 3051449 3051779 -6997258 - Copia_I LTR Copia -2611 1982 1653 6 608 787 301 15 12 chrU 3052144 3052470 -6996567 - Copia_I LTR Copia -3885 708 382 6 608 271 298 0 0 chrU 3052533 3052647 -6996390 - Copia_I LTR Copia -4328 265 152 6 608 500 132 275 15 chrU 3052983 3053114 -6995923 + DMLTR5 LTR Gypsy 102 266 0 6 608 1870 110 47 15 chrU 3053113 3053455 -6995582 + HMSBEAGLE_I LTR Gypsy 1 353 -6176 6 608 28 29 0 0 chrU 3053465 3053500 -6995537 + AT_rich Low_complexity Low_complexity 1 35 0 6 608 4116 117 0 0 chrU 3053662 3054270 -6994767 + HMSBEAGLE_I LTR Gypsy 1212 1819 -4710 6 608 368 89 0 0 chrU 3054260 3054316 -6994721 + HMSBEAGLE_I LTR Gypsy 2346 2401 -4128 6 608 1714 108 16 60 chrU 3054367 3054683 -6994354 - Gypsy6A_LTR LTR Gypsy -118 302 1 6 608 1622 165 116 12 chrU 3061244 3061588 -6987449 + HMSBEAGLE_I LTR Gypsy 2422 2801 -3728 6 608 7067 130 25 1 chrU 3061587 3063168 -6985869 + HMSBEAGLE_I LTR Gypsy 3155 4773 -1756 6 608 1091 97 0 0 chrU 3063162 3063306 -6985731 + HMSBEAGLE_I LTR Gypsy 4881 5024 -1505 6 608 873 76 8 8 chrU 3063316 3063436 -6985601 + HMSBEAGLE_I LTR Gypsy 234 353 -6176 6 608 32 43 0 0 chrU 3063446 3063492 -6985545 + AT_rich Low_complexity Low_complexity 1 46 0 6 608 2801 133 0 2 chrU 3063654 3064061 -6984976 + HMSBEAGLE_I LTR Gypsy 1212 1617 -4912 6 608 4434 47 111 2 chrU 3064162 3064738 -6984299 - IVK_DM LINE I -503 4899 4261 6 608 4773 23 16 7 chrU 3064736 3065300 -6983737 - PROTOP_A DNA P -536 569 1 6 608 311 303 42 14 chrU 3065301 3065515 -6983522 + DM176_I LTR Gypsy 6113 6332 -88 6 608 1141 73 124 6 chrU 3065503 3065681 -6983356 + DMTOM1_LTR LTR Gypsy 80 278 -132 6 608 1208 39 90 6 chrU 3065679 3065835 -6983202 + DNAREP1_DM LINE Penelope 426 594 0 6 608 1114 185 24 39 chrU 3065849 3066273 -6982764 + DNAREP1_DM LINE Penelope 84 332 -262 6 608 512 86 138 11 chrU 3066271 3066365 -6982672 + DNAREP1_DM LINE Penelope 201 306 -288 6 608 555 164 31 17 chrU 3066479 3066650 -6982387 - DNAREP1_DM LINE Penelope -262 332 124 6 608 949 142 36 23 chrU 3066650 3066924 -6982113 - DNAREP1_DM LINE Penelope -262 332 86 6 608 456 36 0 0 chrU 3066930 3066985 -6982052 - DNAREP1_DM LINE Penelope 0 594 540 6 608 18956 54 48 5 chrU 3067032 3069576 -6979461 + DOC5_DM LINE Jockey 158 2809 -1873 6 608 2468 75 102 5 chrU 3069603 3070187 -6978850 + DOC5_DM LINE Jockey 3044 3683 -999 6 608 4125 54 26 39 chrU 3070198 3070817 -6978220 + DOC5_DM LINE Jockey 4072 4682 0 6 608 1916 106 61 10 chrU 3070816 3071112 -6977925 + Gypsy2_I LTR Gypsy 5477 5787 -348 6 608 2682 121 16 90 chrU 3071112 3071621 -6977416 + Gypsy2_I LTR Gypsy 5653 6123 -12 6 608 1236 151 5 5 chrU 3071624 3071830 -6977207 + Gypsy2_LTR LTR Gypsy 1 206 -147 6 608 1761 157 77 28 chrU 3071997 3072498 -6976539 - QUASIMODO_LTR LTR Gypsy 0 658 1 6 608 1019 267 68 35 chrU 3072498 3073243 -6975794 - QUASIMODO_I LTR Gypsy 0 6060 5291 6 608 3308 49 25 0 chrU 3073240 3073645 -6975392 + Baggins1 LINE LOA 603 1017 -4436 6 608 1523 29 0 0 chrU 3073668 3073838 -6975199 + Baggins1 LINE LOA 1100 1269 -4184 6 608 285 240 28 37 chrU 3073838 3073946 -6975091 + MAX_I LTR Pao 54 160 -7754 6 608 12428 50 69 1 chrU 3074181 3077986 -6971051 + Baggins1 LINE LOA 1253 5452 -1 6 608 237 250 0 0 chrU 3078201 3078265 -6970772 + DM297_I LTR Gypsy 2362 2425 -3742 6 608 5939 49 34 14 chrU 3078307 3079075 -6969962 + DOC3_DM LINE Jockey 7 789 -3951 6 608 669 48 0 180 chrU 3079095 3079223 -6969814 + Baggins1 LINE LOA 3150 3254 -2199 6 608 2836 43 31 8 chrU 3079214 3079568 -6969469 + Baggins1 LINE LOA 3438 3799 -1654 6 608 12628 632 1 3 chrU 3079586 3084285 -6964752 + DOC LINE Jockey 32 4721 -4 6 608 5457 41 27 6 chrU 3084284 3085337 -6963700 + Baggins1 LINE LOA 3784 4954 -499 6 608 1394 21 129 18 chrU 3085331 3085617 -6963420 + Baggins1 LINE LOA 5136 5453 0 6 608 898 130 33 23 chrU 3085615 3085790 -6963247 - QUASIMODO_LTR LTR Gypsy -174 484 166 6 608 1107 167 96 77 chrU 3085796 3086120 -6962917 + DNAREP1_DM LINE Penelope 86 415 -179 6 608 1549 65 5 5 chrU 3086122 3086322 -6962715 - DMTOM1_LTR LTR Gypsy -206 204 5 6 608 1228 274 66 8 chrU 3086351 3086884 -6962153 - TOM_I LTR Gypsy -56 6056 5493 6 608 2245 253 59 21 chrU 3086866 3087678 -6961359 - TOM_I LTR Gypsy -1010 5574 4415 6 608 795 134 232 0 chrU 3087684 3087949 -6961088 + FB4_DM DNA Tc1 1122 1447 -2642 6 608 272 215 11 151 chrU 3088015 3088108 -6960929 + DM176_LTR LTR Gypsy 190 269 -238 6 608 617 148 40 16 chrU 3088235 3088359 -6960678 + DMTOM1_LTR LTR Gypsy 284 410 0 6 608 398 114 14 28 chrU 3088359 3088422 -6960615 + DMTOM1_LTR LTR Gypsy 349 410 0 6 608 344 223 23 76 chrU 3088422 3088553 -6960484 + ROVER-I_DM LTR Gypsy 1 124 -6460 6 608 3429 39 7 0 chrU 3088701 3089108 -6959929 - DIVER_I LTR Pao -5233 410 1 6 608 1300 112 0 93 chrU 3089129 3089376 -6959661 - DIVER_LTR LTR Pao 0 224 1 6 608 5807 39 1 1 chrU 3089376 3090062 -6958975 - R1_DM LINE R1 -3897 1459 774 6 608 1691 75 13 0 chrU 3090065 3090292 -6958745 - R1_DM LINE R1 -5126 230 1 6 608 985 44 0 0 chrU 3090325 3090439 -6958598 - R1_DM LINE R1 0 5356 5243 6 608 7449 28 1 0 chrU 3090436 3091288 -6957749 - R1_DM LINE R1 -290 5066 4214 6 608 26976 20 13 6 chrU 3096180 3099337 -6949700 - STALKER4_I LTR Gypsy -1509 5021 1845 6 608 4286 84 84 28 chrU 3099344 3100091 -6948946 - STALKER4_I LTR Gypsy -5006 1524 736 6 608 792 206 6 6 chrU 3100083 3100254 -6948783 - Stalker2_I LTR Gypsy -6941 461 291 6 608 27 49 0 0 chrU 3100285 3100326 -6948711 + AT_rich Low_complexity Low_complexity 1 41 0 6 608 3095 50 5 0 chrU 3100464 3100841 -6948196 - STALKER4_LTR LTR Gypsy -23 379 1 6 608 4637 48 38 2 chrU 3100841 3101420 -6947617 - R1_DM LINE R1 -3757 1599 1000 6 608 4245 65 77 3 chrU 3101423 3101994 -6947043 - R1_DM LINE R1 -4743 613 1 6 608 985 44 0 0 chrU 3102027 3102141 -6946896 - R1_DM LINE R1 0 5356 5243 6 608 12480 24 1 1 chrU 3102138 3103561 -6945476 - R1_DM LINE R1 -290 5066 3643 6 608 5853 24 1 3 chrU 3107656 3108335 -6940702 - R1_DM LINE R1 -1404 3952 3275 6 608 19858 30 11 3 chrU 3108338 3110662 -6938375 - R1_DM LINE R1 -2214 3142 529 6 608 2849 61 63 5 chrU 3110664 3111043 -6937994 - R1_DM LINE R1 -4955 401 1 6 608 485 36 0 0 chrU 3111043 3111098 -6937939 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 6 608 16364 20 1 1 chrU 3111094 3113017 -6936020 - R2_DM LINE R2 -3 3604 1682 6 608 316 115 19 37 chrU 3113345 3113399 -6935638 - Gypsy5_I LTR Gypsy -6456 53 1 6 608 24 32 0 0 chrU 3113476 3113507 -6935530 + AT_rich Low_complexity Low_complexity 1 31 0 6 608 1263 176 17 53 chrU 3113540 3113840 -6935197 - Gypsy5_LTR LTR Gypsy -141 289 1 6 608 4856 55 5 0 chrU 3113840 3114434 -6934603 + DIVER2_I LTR Pao 2798 3394 -753 6 608 3366 22 8 2 chrU 3114426 3114828 -6934209 + DIVER2_I LTR Pao 3742 4145 -2 6 608 3051 21 35 0 chrU 3114829 3115201 -6933836 + DIVER2_LTR LTR Pao 1 385 0 6 608 1663 98 4 4 chrU 3115201 3115446 -6933591 - Gypsy10_I LTR Gypsy -1673 3605 3361 6 608 8479 260 42 8 chrU 3115447 3118734 -6930303 - Gypsy3_I LTR Gypsy -1197 5815 2296 6 608 390 214 83 54 chrU 3118736 3118892 -6930145 + Stalker2_LTR LTR Gypsy 1 161 -263 6 608 3578 15 0 0 chrU 3118892 3119299 -6929738 - Gypsy6_LTR LTR Gypsy 0 407 1 6 608 1427 124 22 34 chrU 3119299 3119566 -6929471 + Stalker2_LTR LTR Gypsy 161 424 0 6 608 265 125 0 0 chrU 3119556 3119583 -6929454 + STALKER4_I LTR Gypsy 1 27 -6503 6 608 266 135 0 37 chrU 3119583 3119637 -6929400 + Stalker2_I LTR Gypsy 1 52 -7350 6 608 3343 161 27 21 chrU 3119811 3120469 -6928568 + Stalker2_I LTR Gypsy 242 903 -6499 6 608 23 0 0 0 chrU 3120566 3120589 -6928448 + AT_rich Low_complexity Low_complexity 1 23 0 6 608 249 33 0 0 chrU 3120694 3120724 -6928313 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 608 1068 330 59 42 chrU 3120732 3122030 -6927007 + BLOOD_I LTR Gypsy 1513 2833 -3780 6 608 2902 14 3 8 chrU 3122067 3122430 -6926607 - DOC2_DM LINE Jockey 0 4793 4433 6 608 28144 19 38 8 chrU 3122870 3126591 -6922446 - DOC2_DM LINE Jockey -919 3874 10 6 608 201 39 0 0 chrU 3126591 3126617 -6922420 + (A)n Simple_repeat Simple_repeat 1 26 0 6 608 11030 249 20 11 chrU 3126673 3130027 -6919010 + DM412 LTR Gypsy 3200 6582 -315 6 608 217 132 0 0 chrU 3130348 3130386 -6918651 + (A)n Simple_repeat Simple_repeat 1 38 0 6 608 329 69 44 0 chrU 3130387 3130468 -6918569 + STALKER4_I LTR Gypsy 6491 6530 0 6 608 1359 132 16 24 chrU 3130468 3130717 -6918320 + Stalker2_LTR LTR Gypsy 1 247 -177 6 608 3656 57 99 6 chrU 3131154 3131670 -6917367 - Baggins1 LINE LOA 0 5453 4890 6 608 8955 54 23 5 chrU 3131963 3133149 -6915888 - Jockey2 LINE Jockey 0 3428 2222 6 608 5447 107 8 3 chrU 3133148 3133988 -6915049 - Jockey2 LINE Jockey -1258 2170 1419 6 608 462 363 14 14 chrU 3133973 3134191 -6914846 - LINEJ1_DM LINE Jockey -2137 2883 2666 6 608 725 149 32 57 chrU 3134369 3134526 -6914511 - Gypsy5_LTR LTR Gypsy -201 229 77 6 608 601 73 0 0 chrU 3134530 3134612 -6914425 - Jockey2 LINE Jockey -3346 82 1 6 608 1544 191 29 59 chrU 3134743 3135187 -6913850 - Gypsy_LTR LTR Gypsy -51 431 1 6 608 2625 106 6 48 chrU 3137418 3143962 -6905075 + DMSAT6 Satellite Satellite 1 6271 0 6 9 2576 106 12 42 chrU 3143979 3148953 -6900084 + DMSAT6 Satellite Satellite 1 4820 -15 6 609 2684 109 12 32 chrU 3148970 3157023 -6892014 + DMSAT6 Satellite Satellite 1 7894 0 6 609 2565 108 17 14 chrU 3157047 3158723 -6890314 + DMSAT6 Satellite Satellite 1 1681 0 6 609 2685 114 21 17 chrU 3158739 3160715 -6888322 + DMSAT6 Satellite Satellite 1 1984 0 6 609 2589 102 16 48 chrU 3160732 3161301 -6887736 + DMSAT6 Satellite Satellite 1 550 0 6 609 585 85 0 12 chrU 3161418 3161501 -6887536 - Gypsy12_I LTR Gypsy -209 5337 5256 6 609 1179 65 0 7 chrU 3161499 3161653 -6887384 - Gypsy12_I LTR Gypsy -887 4659 4507 6 609 940 150 0 0 chrU 3161643 3161796 -6887241 - Gypsy12_I LTR Gypsy -1229 4317 4165 6 609 1307 60 14 43 chrU 3161787 3161995 -6887042 + BATUMI_I LTR Pao 6995 7196 -767 6 609 2391 126 16 6 chrU 3161993 3162649 -6886388 + HMSBEAGLE_I LTR Gypsy 1236 1999 -4530 6 609 693 139 192 20 chrU 3162738 3163061 -6885976 + Gypsy11_LTR LTR Gypsy 175 594 0 6 609 1884 117 42 25 chrU 3163072 3163433 -6885604 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 609 595 187 112 24 chrU 3163433 3163603 -6885434 - ROVER-I_DM LTR Gypsy 0 6584 6400 6 609 10975 29 58 1 chrU 3171429 3172797 -6876240 - Copia2_I LTR Copia -745 3417 1972 6 609 232 122 49 0 chrU 3173148 3173189 -6875848 + DMRT1C LINE R1 1934 1976 -3467 6 609 941 206 5 24 chrU 3173972 3174181 -6874856 + DMLTR5 LTR Gypsy 62 266 0 6 609 1508 107 75 22 chrU 3174180 3174448 -6874589 + HMSBEAGLE_I LTR Gypsy 1 282 -6247 6 609 2442 127 160 1 chrU 3174507 3175187 -6873850 + HMSBEAGLE_I LTR Gypsy 1212 1999 -4530 6 609 763 84 276 17 chrU 3175276 3175496 -6873541 + Gypsy11_LTR LTR Gypsy 175 452 0 6 609 272 197 26 0 chrU 3175497 3175573 -6873464 + IDEFIX_LTR LTR Gypsy 489 566 -28 6 609 2389 0 0 0 chrU 3175574 3175850 -6873187 - Copia_LTR LTR Copia 0 276 1 6 609 4841 0 0 0 chrU 3175850 3176386 -6872651 - Copia_I LTR Copia 0 4593 4058 6 609 728 12 0 0 chrU 3181735 3181821 -6867216 - Copia_LTR LTR Copia -190 86 1 6 609 21 36 0 0 chrU 3181834 3181862 -6867175 + AT_rich Low_complexity Low_complexity 1 28 0 6 609 1979 105 44 28 chrU 3181862 3182223 -6866814 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 609 2617 166 42 9 chrU 3182223 3182799 -6866238 - ROVER-I_DM LTR Gypsy 0 6584 5990 6 609 5722 177 18 16 chrU 3182834 3183939 -6865098 - ROVER-I_DM LTR Gypsy -1276 5308 4202 6 609 738 19 111 6 chrU 3184051 3184377 -6864660 + (TA)n Simple_repeat Simple_repeat 1 360 0 6 609 2530 7 78 0 chrU 3184380 3184689 -6864348 + IDEFIX_LTR LTR Gypsy 262 594 0 6 609 25 0 0 0 chrU 3184879 3184904 -6864133 + AT_rich Low_complexity Low_complexity 1 25 0 6 609 1624 0 11 5 chrU 3185207 3185397 -6863640 + IDEFIX_I LTR Gypsy 1 191 -5437 6 609 39 50 0 0 chrU 3185769 3185829 -6863208 + AT_rich Low_complexity Low_complexity 1 60 0 6 609 26 50 0 0 chrU 3186044 3186084 -6862953 + AT_rich Low_complexity Low_complexity 1 40 0 6 609 1998 5 0 0 chrU 3186132 3186356 -6862681 + DIVER_LTR LTR Pao 1 224 0 6 609 2928 9 6 3 chrU 3186377 3186711 -6862326 + DIVER_I LTR Pao 1 335 -5308 6 609 5819 19 37 0 chrU 3193274 3193978 -6855059 + ROO_I LTR Pao 6527 7256 -1000 6 609 5912 43 15 8 chrU 3193971 3194748 -6854289 + ROO_I LTR Pao 7474 8256 0 6 609 3029 40 70 2 chrU 3194748 3195149 -6853888 + ROO_LTR LTR Pao 1 428 0 6 609 6015 6 0 0 chrU 3206316 3206980 -6842057 - LINEJ1_DM LINE Jockey -1608 3412 2749 6 609 2396 164 207 52 chrU 3206974 3207630 -6841407 + GTWIN_I LTR Gypsy 73 829 -5592 6 609 231 314 37 37 chrU 3215490 3215652 -6833385 + TV1I LTR Gypsy 490 651 -5312 6 609 652 238 76 0 chrU 3216009 3216181 -6832856 + QUASIMODO_I LTR Gypsy 1815 1999 -4061 6 609 1565 123 50 0 chrU 3216213 3216473 -6832564 - MAX_LTR LTR Pao -48 273 1 6 609 1001 224 4 0 chrU 3216473 3216714 -6832323 + QUASIMODO_I LTR Gypsy 1996 2237 -3823 6 609 11840 9 16 22 chrU 3216715 3218122 -6830915 + Invader3_I LTR Gypsy 1153 2551 -2337 6 609 2900 53 81 0 chrU 3226846 3227239 -6821798 + DMCR1A LINE CR1 314 738 -3732 6 609 259 48 21 97 chrU 3227468 3227561 -6821476 + (TAA)n Simple_repeat Simple_repeat 1 86 0 6 609 309 63 40 171 chrU 3227732 3227808 -6821229 - BS2 LINE Jockey -4458 263 198 6 609 1043 8 0 0 chrU 3227828 3227946 -6821091 + DMCR1A LINE CR1 3111 3228 -1242 6 609 5768 2 0 0 chrU 3228049 3228687 -6820350 - BARI_DM DNA Tc1 -1087 641 4 6 609 15602 1 0 0 chrU 3228687 3230411 -6818626 - BARI_DM DNA Tc1 -1 1727 4 6 609 23 68 0 0 chrU 3231874 3231918 -6817119 + AT_rich Low_complexity Low_complexity 1 44 0 6 609 6501 47 70 12 chrU 3232069 3232982 -6816055 + DOC5_DM LINE Jockey 1606 2571 -2111 6 609 6655 40 103 58 chrU 3232979 3234088 -6814949 + DOC5_DM LINE Jockey 2761 3919 -763 6 609 1106 188 11 15 chrU 3234254 3234491 -6814546 - Gypsy5_LTR LTR Gypsy -199 231 10 6 609 3166 162 61 2 chrU 3234500 3235087 -6813950 - Gypsy5_I LTR Gypsy -4 6505 5884 6 609 23258 69 7 1 chrU 3235091 3238292 -6810745 - I_DM LINE I -755 5476 2258 6 609 7645 182 19 3 chrU 3238281 3239802 -6809235 - Gypsy5_I LTR Gypsy -649 5860 4315 6 609 11341 172 44 2 chrU 3239802 3242752 -6806285 - Gypsy5_I LTR Gypsy -2512 3997 923 6 609 1745 200 6 3 chrU 3242753 3243089 -6805948 - Gypsy5_I LTR Gypsy -5935 574 238 6 609 2938 57 0 3 chrU 3243240 3243629 -6805408 - ZAM_I LTR Gypsy -2557 4933 4546 6 609 4258 187 2 0 chrU 3243621 3244464 -6804573 - Gypsy5_I LTR Gypsy -1350 5159 4315 6 609 11341 172 44 2 chrU 3244464 3247414 -6801623 - Gypsy5_I LTR Gypsy -2512 3997 923 6 609 1745 200 6 3 chrU 3247415 3247751 -6801286 - Gypsy5_I LTR Gypsy -5935 574 238 6 609 11059 44 3 1 chrU 3247902 3249266 -6799771 - ZAM_I LTR Gypsy -2557 4933 3567 6 609 8293 54 12 103 chrU 3249366 3250822 -6798215 + BATUMI_I LTR Pao 121 1444 -6519 6 609 512 185 0 0 chrU 3259165 3259273 -6789764 - STALKER4_I LTR Gypsy -6188 342 235 6 609 3159 55 20 14 chrU 3259414 3259844 -6789193 - STALKER4_LTR LTR Gypsy -3 399 1 6 609 910 181 57 38 chrU 3259844 3260167 -6788870 + STALKER4_I LTR Gypsy 214 807 -5723 6 609 180 0 0 0 chrU 3260167 3260187 -6788850 + (TA)n Simple_repeat Simple_repeat 1 20 0 6 609 8989 92 79 9 chrU 3260187 3261720 -6787317 + STALKER4_I LTR Gypsy 578 2549 -3981 6 609 889 34 0 8 chrU 3261725 3261843 -6787194 + STALKER4_I LTR Gypsy 2679 2795 -3735 6 609 1306 181 109 6 chrU 3261841 3262153 -6786884 + TAHRE LINE telomeric 7237 7580 -2883 6 609 1006 152 104 123 chrU 3262158 3262487 -6786550 + TAHRE LINE telomeric 9381 9778 -4699 6 609 2809 12 0 83 chrU 3262489 3262863 -6786174 - MICROPIA_LTR LTR Gypsy 0 476 134 6 609 12429 31 17 0 chrU 3269203 3270696 -6778341 + DMRT1B LINE R1 947 2464 -2719 6 609 1869 17 13 25 chrU 3270796 3271033 -6778004 + TRANSIB2 DNA Transib 2611 2844 0 6 609 866 310 33 4 chrU 3271112 3271594 -6777443 + Copia_I LTR Copia 2817 3312 -1281 6 609 2317 163 138 31 chrU 3271639 3272220 -6776817 - QUASIMODO_LTR LTR Gypsy -13 645 3 6 609 366 244 269 0 chrU 3272327 3272461 -6776576 + Invader1_I LTR Gypsy 957 1126 -2060 6 610 519 203 52 22 chrU 3279094 3279230 -6769807 - R1_DM LINE R1 -642 4714 4575 6 610 255 81 0 0 chrU 3279235 3279272 -6769765 - R1_DM LINE R1 -1275 4081 4045 6 610 2012 122 168 15 chrU 3279274 3279930 -6769107 - R1_DM LINE R1 -1418 3938 3182 6 610 792 162 47 0 chrU 3279983 3280131 -6768906 - R1_DM LINE R1 -2329 3027 2873 6 610 480 103 0 0 chrU 3280132 3280200 -6768837 - R1_DM LINE R1 -3354 2002 1935 6 610 932 160 149 9 chrU 3280196 3280417 -6768620 - R1_DM LINE R1 -3524 1832 1581 6 610 292 118 395 0 chrU 3280436 3280512 -6768525 - R1_DM LINE R1 -3848 1508 1403 6 610 1171 188 98 4 chrU 3280531 3280808 -6768229 - R1_DM LINE R1 -4033 1323 1021 6 610 443 117 224 21 chrU 3280811 3280934 -6768103 + DNAREP1_DM LINE Penelope 433 567 -27 6 610 1316 163 282 50 chrU 3281118 3282044 -6766993 + PROTOP_B DNA P 11 1153 0 6 610 25 31 0 0 chrU 3282618 3282650 -6766387 + AT_rich Low_complexity Low_complexity 1 32 0 6 610 1008 217 89 10 chrU 3282979 3283272 -6765765 - R1_DM LINE R1 -466 4890 4575 6 610 255 81 0 0 chrU 3283277 3283314 -6765723 - R1_DM LINE R1 -1275 4081 4045 6 610 1956 113 46 19 chrU 3283316 3283686 -6765351 - R1_DM LINE R1 -1418 3938 3559 6 610 390 155 175 0 chrU 3283681 3283778 -6765259 - R1_DM LINE R1 -3662 1694 1581 6 610 292 118 395 0 chrU 3283797 3283873 -6765164 - R1_DM LINE R1 -3848 1508 1403 6 610 1695 233 118 47 chrU 3290553 3291266 -6757771 + Gypsy12_LTR LTR Gypsy 9 772 -1564 6 610 263 261 30 89 chrU 3291277 3291445 -6757592 + Gypsy12_LTR LTR Gypsy 831 988 -1348 6 610 256 216 278 0 chrU 3291473 3291570 -6757467 + Gypsy12_LTR LTR Gypsy 1090 1213 -1123 6 610 1106 202 162 14 chrU 3291574 3291931 -6757106 + Gypsy12_LTR LTR Gypsy 1736 2145 -191 6 610 19369 55 17 7 chrU 3292031 3294895 -6754142 - ZAM_I LTR Gypsy -4088 3402 1 6 610 2745 120 8 41 chrU 3294895 3295383 -6753654 - ZAM_LTR LTR Gypsy 0 472 1 6 610 919 86 21 14 chrU 3295383 3295500 -6753537 + DIVER2_I LTR Pao 2798 2915 -1232 6 610 1179 39 0 0 chrU 3295492 3295647 -6753390 - ZAM_I LTR Gypsy -3527 3963 3809 6 610 630 35 12 0 chrU 3295647 3295733 -6753304 - ZAM_LTR LTR Gypsy -385 87 1 6 610 10279 36 36 0 chrU 3295733 3297038 -6751999 + DIVER2_I LTR Pao 2796 4147 0 6 610 3167 21 3 3 chrU 3297038 3297423 -6751614 + DIVER2_LTR LTR Pao 1 385 0 6 610 229 119 0 67 chrU 3297706 3297751 -6751286 + HMSBEAGLE_I LTR Gypsy 6364 6405 -124 6 610 728 131 33 0 chrU 3297849 3297971 -6751066 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 6 610 484 174 0 0 chrU 3298138 3298224 -6750813 + DMLTR5 LTR Gypsy 102 187 -79 6 610 1540 98 135 14 chrU 3298270 3298559 -6750478 + HMSBEAGLE_I LTR Gypsy 36 359 -6170 6 610 42 20 0 0 chrU 3298574 3298623 -6750414 + AT_rich Low_complexity Low_complexity 1 49 0 6 610 2734 138 0 0 chrU 3298785 3299213 -6749824 + HMSBEAGLE_I LTR Gypsy 1212 1639 -4890 6 610 2408 133 3 0 chrU 3299213 3299597 -6749440 + HMSBEAGLE_I LTR Gypsy 1751 2135 -4394 6 610 18536 155 45 11 chrU 3299595 3302939 -6746098 + HMSBEAGLE_I LTR Gypsy 2365 5819 -710 6 610 1336 197 66 48 chrU 3303492 3303886 -6745151 + HMSBEAGLE_I LTR Gypsy 5951 6351 -178 6 610 3180 21 0 3 chrU 3303901 3304283 -6744754 + DIVER2_LTR LTR Pao 5 385 0 6 610 708 148 33 0 chrU 3304398 3304520 -6744517 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 6 610 484 174 0 0 chrU 3304687 3304773 -6744264 + DMLTR5 LTR Gypsy 102 187 -79 6 610 1580 95 171 13 chrU 3304809 3305119 -6743918 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 6 610 41 21 0 0 chrU 3305134 3305182 -6743855 + AT_rich Low_complexity Low_complexity 1 48 0 6 610 2721 140 0 0 chrU 3305344 3305772 -6743265 + HMSBEAGLE_I LTR Gypsy 1212 1639 -4890 6 610 1060 126 0 0 chrU 3305772 3305931 -6743106 + HMSBEAGLE_I LTR Gypsy 1751 1909 -4620 6 610 1675 163 0 3 chrU 3305940 3306260 -6742777 - Gypsy5_I LTR Gypsy -1876 4633 4315 6 610 15257 175 40 1 chrU 3306260 3309222 -6739815 - Gypsy5_I LTR Gypsy -2512 3997 923 6 610 1635 200 6 3 chrU 3309223 3309559 -6739478 - Gypsy5_I LTR Gypsy -5935 574 238 6 610 18403 43 40 2 chrU 3309710 3312617 -6736420 - ZAM_I LTR Gypsy -2557 4933 1919 6 610 6958 0 0 0 chrU 3312717 3313508 -6735529 + NOMAD_I LTR Gypsy 5782 6572 0 6 610 4502 2 0 0 chrU 3313508 3314026 -6735011 + NOMAD_LTR LTR Gypsy 1 518 0 6 610 842 187 70 97 chrU 3314027 3314400 -6734637 + ROVER-LTR_DM LTR Gypsy 5 367 0 6 610 493 211 155 6 chrU 3314400 3314581 -6734456 + ROVER-I_DM LTR Gypsy 1 208 -6376 6 610 662 281 63 0 chrU 3314563 3314816 -6734221 + ROVER-I_DM LTR Gypsy 1161 1429 -5155 6 610 6769 246 23 23 chrU 3314828 3316924 -6732113 + ROVER-I_DM LTR Gypsy 1514 3609 -2975 6 610 4207 189 21 2 chrU 3316925 3317950 -6731087 + ROVER-I_DM LTR Gypsy 3962 5025 -1395 6 610 1184 132 107 15 chrU 3326537 3326799 -6722238 + ROVER-I_DM LTR Gypsy 6299 6584 0 6 610 756 131 13 46 chrU 3326799 3326951 -6722086 + ROVER-LTR_DM LTR Gypsy 1 147 -220 6 610 4126 32 6 0 chrU 3326955 3327486 -6721551 + IDEFIX_I LTR Gypsy 664 1197 -4431 6 610 786 179 161 85 chrU 3327498 3327839 -6721198 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 610 1341 56 0 0 chrU 3327859 3328037 -6721000 + IDEFIX_I LTR Gypsy 1403 1580 -4048 6 610 5352 78 44 66 chrU 3328204 3329129 -6719908 - CIRCE LINE Composite -1376 4980 4076 6 610 1757 82 61 4 chrU 3329116 3329396 -6719641 - CIRCE LINE Composite -2474 3882 3587 6 610 3945 63 201 24 chrU 3329405 3330082 -6718955 - CIRCE LINE Composite -3059 3297 2501 6 610 597 12 11 69 chrU 3330260 3330347 -6718690 - CIRCE LINE Composite -4387 1969 1888 6 610 366 266 28 28 chrU 3330271 3330414 -6718623 - Gypsy12_I LTR Gypsy -1569 3977 3835 6 610 3954 57 19 34 chrU 3330423 3330991 -6718046 - CIRCE LINE Composite -4474 1882 1323 6 610 424 333 26 26 chrU 3330882 3331150 -6717887 - Gypsy12_I LTR Gypsy -2191 3355 3088 6 610 1799 60 38 76 chrU 3331091 3331381 -6717656 - CIRCE LINE Composite -5064 1292 1014 6 610 395 58 0 0 chrU 3331377 3331429 -6717608 - CIRCE LINE Composite -6304 52 1 6 610 2297 45 86 0 chrU 3331429 3331811 -6717226 - CIRCE LINE Composite 0 6356 5942 6 610 4446 69 118 21 chrU 3332033 3332802 -6716235 - CIRCE LINE Composite -1376 4980 4137 6 610 329 159 0 31 chrU 3332847 3332912 -6716125 - CIRCE LINE Composite -2219 4137 4075 6 610 1042 69 0 0 chrU 3332905 3333050 -6715987 - CIRCE LINE Composite -1936 4420 4276 6 610 605 73 0 0 chrU 3333053 3333135 -6715902 + IDEFIX_I LTR Gypsy 1937 2009 -3619 6 610 1383 197 105 20 chrU 3333235 3334946 -6714091 + SAR_DM Satellite Satellite 1 1856 -680 6 610 377 206 21 0 chrU 3334871 3334968 -6714069 - XDMR_DM Unknown Unknown -7 353 255 6 610 1451 203 80 13 chrU 3334963 3336008 -6713029 + SAR_DM Satellite Satellite 1 1114 -680 6 610 271 195 207 0 chrU 3335947 3336029 -6713008 - XDMR_DM Unknown Unknown -7 353 255 6 610 1130 187 40 10 chrU 3336024 3339069 -6709968 + SAR_DM Satellite Satellite 1 3135 -680 6 610 1361 25 0 0 chrU 3339085 3339243 -6709794 - Copia2_LTR_DM LTR Copia 0 198 41 6 610 29060 30 59 1 chrU 3339257 3342877 -6706160 - Copia2_I LTR Copia -1 4161 334 6 610 1272 32 0 6 chrU 3342891 3343050 -6705987 + PROTOP_B DNA P 154 310 -843 6 610 21 0 0 0 chrU 3343064 3343085 -6705952 + AT_rich Low_complexity Low_complexity 1 21 0 6 610 1628 53 12 4 chrU 3343085 3343332 -6705705 + PROTOP_B DNA P 647 895 -258 6 610 677 82 0 20 chrU 3343323 3343422 -6705615 + PROTOP_B DNA P 1059 1153 0 6 610 979 139 113 3 chrU 3343422 3343647 -6705390 - DNAREP1_DM LINE Penelope -262 332 117 6 610 271 0 71 36 chrU 3343736 3343792 -6705245 + (TATAA)n Simple_repeat Simple_repeat 1 58 0 6 610 18493 37 6 8 chrU 3343939 3347746 -6701291 + DIVER_I LTR Pao 10 3967 -1676 6 610 1257 112 0 93 chrU 3347789 3348036 -6701001 - DIVER_LTR LTR Pao 0 224 1 6 610 1983 49 108 34 chrU 3348121 3348416 -6700621 + NINJA_LTR LTR Pao 1 317 0 6 610 3938 13 14 60 chrU 3348434 3348933 -6700104 + MICROPIA_LTR LTR Gypsy 1 476 0 6 610 28 48 0 0 chrU 3349052 3349094 -6699943 + AT_rich Low_complexity Low_complexity 1 42 0 6 610 1311 67 6 11 chrU 3349186 3349368 -6699669 - Copia2_I LTR Copia -1425 2737 2557 6 610 6288 37 15 0 chrU 3349366 3350416 -6698621 - Copia2_I LTR Copia -1708 2454 1347 6 610 997 45 30 8 chrU 3350433 3350567 -6698470 - Copia2_I LTR Copia -3124 1038 902 6 610 614 81 161 9 chrU 3350549 3350661 -6698376 - DNAREP1_DM LINE Penelope -325 269 141 6 610 4023 54 146 5 chrU 3350646 3351264 -6697773 - Copia2_I LTR Copia -3124 1038 334 6 610 1328 25 0 0 chrU 3351278 3351436 -6697601 + PROTOP_B DNA P 154 310 -843 6 610 28 0 0 0 chrU 3351450 3351478 -6697559 + AT_rich Low_complexity Low_complexity 1 28 0 6 610 3693 61 10 0 chrU 3351478 3351969 -6697068 + PROTOP_B DNA P 658 1153 0 6 610 22 35 0 0 chrU 3352003 3352032 -6697005 + AT_rich Low_complexity Low_complexity 1 29 0 6 610 28 48 0 0 chrU 3352260 3352302 -6696735 + AT_rich Low_complexity Low_complexity 1 42 0 6 610 1353 66 0 11 chrU 3352394 3352577 -6696460 - Copia2_I LTR Copia -1425 2737 2557 6 610 1312 38 12 0 chrU 3352575 3352735 -6696302 - Copia2_I LTR Copia -1708 2454 2293 6 610 5700 29 1 1 chrU 3352835 3353550 -6695487 + ROO_I LTR Pao 7542 8256 0 6 610 3672 28 2 0 chrU 3353550 3353977 -6695060 + ROO_LTR LTR Pao 1 428 0 6 610 3992 43 0 0 chrU 3353977 3354462 -6694575 + MDG1_I LTR Gypsy 2661 3145 -3451 6 610 8479 44 37 0 chrU 3354473 3355550 -6693487 + MDG1_I LTR Gypsy 3347 4463 -2133 6 610 5306 66 157 0 chrU 3355549 3356369 -6692668 + MDG1_I LTR Gypsy 5149 6097 -499 6 610 612 71 0 97 chrU 3356370 3356494 -6692543 + MDG1_I LTR Gypsy 6485 6596 0 6 610 242 114 0 0 chrU 3356964 3356999 -6692038 - Invader1_I LTR Gypsy 0 3186 3152 6 610 1476 293 67 34 chrU 3357570 3358343 -6690694 - Invader6_I LTR Gypsy -992 3107 2309 6 610 1623 320 22 26 chrU 3358380 3359183 -6689854 - MICROPIA_I LTR Gypsy -1705 2771 1972 6 610 981 327 30 28 chrU 3359182 3360099 -6688938 - Invader6_I LTR Gypsy -2294 1805 888 6 610 377 282 30 8 chrU 3360151 3360283 -6688754 - Invader4_I LTR Gypsy -2278 135 1 6 610 242 114 0 0 chrU 3360598 3360633 -6688404 - Invader1_I LTR Gypsy 0 3186 3152 6 610 19448 36 69 4 chrU 3365515 3368750 -6680287 - PROTOP DNA P 0 4480 1038 6 610 1545 41 20 10 chrU 3368752 3368950 -6680087 - DOC3_DM LINE Jockey -3049 1691 1492 6 610 378 44 0 0 chrU 3368949 3368994 -6680043 - PROTOP DNA P -3500 980 936 6 610 4038 42 14 4 chrU 3368999 3369502 -6679535 - PROTOP DNA P -3954 526 19 6 610 3264 208 41 57 chrU 3369589 3370890 -6678147 + Invader1_I LTR Gypsy 1514 2505 -681 6 610 3182 58 11 14 chrU 3370891 3371326 -6677711 - STALKER4_LTR LTR Gypsy -3 399 1 6 610 7778 5 15 0 chrU 3371326 3372261 -6676776 - STALKER4_I LTR Gypsy 0 6530 5582 6 610 8824 12 18 3 chrU 3372364 3373396 -6675641 + DMRT1B LINE R1 956 2003 -3180 6 610 1301 127 44 55 chrU 3382041 3382402 -6666635 - QUASIMODO_LTR LTR Gypsy -192 466 1 6 610 366 256 47 56 chrU 3382402 3382724 -6666313 - QUASIMODO_I LTR Gypsy 0 6060 5742 6 610 960 304 84 59 chrU 3382921 3383754 -6665283 - Jockey2 LINE Jockey -341 3087 2234 6 610 22 0 0 0 chrU 3384022 3384044 -6664993 + AT_rich Low_complexity Low_complexity 1 22 0 6 610 271 300 33 0 chrU 3384044 3384164 -6664873 + MDG3_I LTR Gypsy 2294 2417 -2569 6 610 263 100 0 0 chrU 3384279 3384319 -6664718 + DNAREP1_DM LINE Penelope 1 40 -554 6 610 23 0 0 0 chrU 3384336 3384359 -6664678 + AT_rich Low_complexity Low_complexity 1 23 0 6 610 1214 102 123 175 chrU 3384369 3384700 -6664337 + DNAREP1_DM LINE Penelope 176 489 -105 6 610 367 131 264 27 chrU 3384700 3384810 -6664227 - DM297_LTR LTR Gypsy 0 414 279 6 610 23 0 0 0 chrU 3385140 3385163 -6663874 + AT_rich Low_complexity Low_complexity 1 23 0 6 610 550 126 157 59 chrU 3385931 3386106 -6662931 - DNAREP1_DM LINE Penelope -307 287 100 6 610 1188 144 177 4 chrU 3386108 3386373 -6662664 - DNAREP1_DM LINE Penelope -26 568 258 6 610 1842 149 63 25 chrU 3386381 3386883 -6662154 - QUASIMODO_LTR LTR Gypsy -3 655 1 6 610 270 276 40 62 chrU 3386883 3387204 -6661833 - QUASIMODO_I LTR Gypsy 0 6060 5747 6 610 1225 354 68 28 chrU 3387415 3388671 -6660366 - LINEJ1_DM LINE Jockey -322 4698 3392 6 610 410 332 73 73 chrU 3389551 3390184 -6658853 - LINEJ1_DM LINE Jockey -2395 2625 1993 6 610 7234 28 34 0 chrU 3390195 3391510 -6657527 - DMCR1A LINE CR1 0 4470 3111 6 610 299 63 40 171 chrU 3391530 3391606 -6657431 + BS2 LINE Jockey 198 263 -4458 6 610 624 25 97 24 chrU 3391912 3392245 -6656792 + (TTA)n Simple_repeat Simple_repeat 1 357 0 6 610 504 88 43 46 chrU 3392257 3392848 -6656189 + (TTA)n Simple_repeat Simple_repeat 1 588 0 6 610 639 320 30 37 chrU 3393061 3393464 -6655573 - MICROPIA_I LTR Gypsy -496 3980 3581 6 610 286 193 0 0 chrU 3393513 3393571 -6655466 - MICROPIA_I LTR Gypsy -1745 2354 2260 6 610 2038 323 55 20 chrU 3393611 3394784 -6654253 - MICROPIA_I LTR Gypsy -2309 2167 955 6 610 264 261 78 70 chrU 3394875 3395003 -6654034 - MICROPIA_I LTR Gypsy -4347 129 1 6 610 1838 147 67 8 chrU 3395003 3395359 -6653678 - Invader1_LTR LTR Gypsy 0 423 47 6 610 251 120 0 167 chrU 3395740 3395800 -6653237 - Invader1_LTR LTR Gypsy -373 50 1 6 610 982 193 152 30 chrU 3396106 3396462 -6652575 - R1_DM LINE R1 -4859 497 1 6 610 694 80 150 0 chrU 3396483 3396596 -6652441 - DNAREP1_DM LINE Penelope -13 581 452 6 610 306 233 112 0 chrU 3396601 3396717 -6652320 + DMCR1A LINE CR1 4029 4157 -313 6 610 439 56 0 0 chrU 3396748 3396802 -6652235 - PROTOP_B DNA P 0 1153 1100 6 610 34 72 0 0 chrU 3397345 3397414 -6651623 + AT_rich Low_complexity Low_complexity 1 69 0 6 610 370 132 44 0 chrU 3397422 3397490 -6651547 - PROTOP_B DNA P -205 948 878 6 610 25 0 0 0 chrU 3397592 3397617 -6651420 + AT_rich Low_complexity Low_complexity 1 25 0 6 610 1752 129 101 0 chrU 3397617 3397935 -6651102 - PROTOP_B DNA P -793 360 11 6 610 26 0 0 0 chrU 3398064 3398090 -6650947 + AT_rich Low_complexity Low_complexity 1 26 0 6 610 363 47 0 0 chrU 3398505 3398548 -6650489 + DNAREP1_DM LINE Penelope 447 489 -105 6 610 653 150 181 0 chrU 3398548 3398681 -6650356 + DNAREP1_DM LINE Penelope 418 574 -20 6 610 5101 37 61 3 chrU 3398681 3399358 -6649679 + PROTOP_B DNA P 1 712 -441 6 610 1494 73 0 0 chrU 3399356 3399575 -6649462 + S_DM DNA Tc1 1518 1736 0 6 610 575 229 56 98 chrU 3399575 3399952 -6649085 - PROTOP_B DNA P -399 754 394 6 610 1631 51 113 8 chrU 3399942 3400181 -6648856 - PROTOP_B DNA P -891 262 1 6 610 471 132 0 0 chrU 3400265 3400341 -6648696 + DNAREP1_DM LINE Penelope 298 373 -221 6 610 535 130 11 0 chrU 3400494 3400586 -6648451 - DMRT1C LINE R1 -150 5293 5201 6 610 1072 74 55 0 chrU 3400587 3400750 -6648287 + DNAREP1_DM LINE Penelope 46 217 -377 6 610 274 203 0 60 chrU 3400987 3401071 -6647966 - DMCR1A LINE CR1 -1139 3331 3253 6 610 29 70 0 0 chrU 3401136 3401193 -6647844 + AT_rich Low_complexity Low_complexity 1 57 0 6 610 1482 176 159 67 chrU 3401458 3401904 -6647133 - DNAREP1_DM LINE Penelope -107 487 1 6 610 23 33 0 0 chrU 3402398 3402428 -6646609 + AT_rich Low_complexity Low_complexity 1 30 0 6 610 435 92 51 14 chrU 3402806 3402897 -6646140 + DNAREP1_DM LINE Penelope 234 315 -279 6 610 321 230 19 25 chrU 3403001 3403190 -6645847 - DM412 LTR Gypsy -1239 5658 5395 6 610 1424 124 67 4 chrU 3403177 3403445 -6645592 + DNAREP1_DM LINE Penelope 36 320 -274 6 610 764 344 16 13 chrU 3403679 3404127 -6644910 - BLASTOPIA_I LTR Gypsy -419 4062 3614 6 610 1296 315 43 17 chrU 3404471 3405123 -6643914 - BLASTOPIA_I LTR Gypsy -1312 3169 2501 6 610 1644 55 118 4 chrU 3405231 3405468 -6643569 + PROTOP DNA P 1 264 -4216 6 610 756 49 266 0 chrU 3405458 3405649 -6643388 + PROTOP DNA P 395 637 -3843 6 610 451 94 0 34 chrU 3405659 3405747 -6643290 - PROTOP_B DNA P -422 731 647 6 610 545 81 50 0 chrU 3405753 3405852 -6643185 + PROTOP_B DNA P 651 754 -399 6 610 2221 95 23 0 chrU 3405852 3406198 -6642839 - S_DM DNA Tc1 0 1736 1383 6 610 399 59 0 0 chrU 3406197 3406248 -6642789 + S_DM DNA Tc1 1686 1736 0 6 610 1243 92 177 13 chrU 3406248 3406560 -6642477 + PROTOP_B DNA P 753 1063 -42 6 610 1677 44 0 0 chrU 3406560 3406764 -6642273 + PROTOP_A DNA P 1 204 -901 6 610 1070 32 0 0 chrU 3406765 3406889 -6642148 + PROTOP_B DNA P 1032 1153 0 6 610 341 82 0 0 chrU 3406889 3406938 -6642099 + PROTOP_B DNA P 1105 1153 0 6 610 725 340 53 12 chrU 3406985 3407416 -6641621 - BLASTOPIA_I LTR Gypsy -2126 2355 1907 6 611 21 0 0 0 chrU 3407894 3407915 -6641122 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 652 67 0 0 chrU 3407996 3408086 -6640951 + IVK_DM LINE I 4352 4441 -961 6 611 4139 74 13 0 chrU 3408081 3408635 -6640402 + IVK_DM LINE I 4686 5246 -156 6 611 445 97 0 0 chrU 3408684 3408756 -6640281 + FB4_DM DNA Tc1 2579 2650 -1439 6 611 1404 134 48 12 chrU 3408825 3409074 -6639963 + DNAREP1_DM LINE Penelope 219 476 -118 6 611 3112 53 28 0 chrU 3409251 3409650 -6639387 - DMTOM1_LTR LTR Gypsy 0 410 1 6 611 503 264 90 35 chrU 3409648 3409903 -6639134 - DM176_I LTR Gypsy 0 6420 6152 6 611 241 174 0 0 chrU 3409921 3409967 -6639070 - TOM_I LTR Gypsy -321 5791 5746 6 611 627 268 70 24 chrU 3409996 3410283 -6638754 - TOM_I LTR Gypsy -576 5536 5237 6 611 2138 12 0 8 chrU 3410269 3410524 -6638513 - DOC2_DM LINE Jockey 0 4793 4541 6 611 5598 8 0 0 chrU 3410527 3411158 -6637879 - DOC2_DM LINE Jockey -381 4412 3782 6 611 990 68 8 20 chrU 3411265 3413830 -6635207 + RSP Satellite Satellite 1 2533 0 6 611 990 73 6 19 chrU 3413871 3414544 -6634493 + RSP Satellite Satellite 1 664 0 6 611 990 94 9 19 chrU 3414585 3417927 -6631110 + RSP Satellite Satellite 1 3310 0 6 611 937 116 6 19 chrU 3417966 3420802 -6628235 + RSP Satellite Satellite 1 2800 -1 6 611 937 121 7 18 chrU 3420841 3422393 -6626644 + RSP Satellite Satellite 1 1534 -1 6 611 939 108 10 16 chrU 3422433 3423221 -6625816 + RSP Satellite Satellite 1 783 -1 6 611 8465 2 0 2 chrU 3423221 3424163 -6624874 + POGO DNA Pogo 1 940 -1181 6 611 704 0 0 0 chrU 3424162 3424240 -6624797 + POGO DNA Pogo 1598 1675 -446 6 611 2702 0 3 0 chrU 3424233 3424548 -6624489 + POGO DNA Pogo 1806 2121 0 6 611 944 104 8 25 chrU 3424550 3428968 -6620069 + RSP Satellite Satellite 1 4344 0 6 611 944 90 7 19 chrU 3429008 3430395 -6618642 + RSP Satellite Satellite 1 1370 0 6 611 17949 18 15 2 chrU 3430531 3432654 -6616383 - IVK_DM LINE I -3253 2149 1 6 611 744 86 0 0 chrU 3432655 3432771 -6616266 - STALKER4_I LTR Gypsy -302 6228 6113 6 611 2646 103 0 9 chrU 3432856 3433276 -6615761 - STALKER4_I LTR Gypsy -302 6228 5813 6 611 11907 158 62 72 chrU 3433259 3436422 -6612615 - STALKER4_I LTR Gypsy -831 5699 2567 6 611 226 150 0 0 chrU 3436449 3436489 -6612548 + STALKER4_I LTR Gypsy 2600 2639 -3891 6 611 1148 318 24 20 chrU 3436607 3437191 -6611846 + Copia_I LTR Copia 151 736 -3857 6 611 9571 17 0 0 chrU 3437430 3438535 -6610502 + PROTOP_A DNA P 1 1105 0 6 611 396 216 54 0 chrU 3438535 3438646 -6610391 - STALKER4_I LTR Gypsy -6170 360 244 6 611 22 35 0 0 chrU 3438655 3438684 -6610353 + AT_rich Low_complexity Low_complexity 1 29 0 6 611 2732 86 3 0 chrU 3438805 3439177 -6609860 - STALKER4_LTR LTR Gypsy -29 373 1 6 611 4547 112 85 1 chrU 3440364 3441235 -6607802 + S_DM DNA Tc1 46 989 -747 6 611 9261 16 16 1 chrU 3441235 3442324 -6606713 + PROTOP_A DNA P 1 1105 0 6 611 3473 110 6 0 chrU 3442324 3442842 -6606195 + S_DM DNA Tc1 983 1503 -233 6 611 584 153 0 0 chrU 3442840 3442951 -6606086 + S_DM DNA Tc1 1625 1735 -1 6 611 21 0 0 0 chrU 3443479 3443500 -6605537 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 4846 119 7 1 chrU 3444139 3444889 -6604148 - S_DM DNA Tc1 0 1736 983 6 611 9514 13 16 1 chrU 3444889 3445978 -6603059 - PROTOP_A DNA P 0 1105 1 6 611 739 117 9 0 chrU 3445978 3446089 -6602948 - S_DM DNA Tc1 -747 989 878 6 611 2865 113 65 6 chrU 3446255 3446745 -6602292 - S_DM DNA Tc1 -1127 609 91 6 611 433 128 139 13 chrU 3446745 3446824 -6602213 + DNAREP1_DM LINE Penelope 396 484 -110 6 611 26 64 0 0 chrU 3446835 3446882 -6602155 + AT_rich Low_complexity Low_complexity 1 47 0 6 611 970 181 208 34 chrU 3447262 3447646 -6601391 + FB4_DM DNA Tc1 37 487 -3602 6 611 1526 118 0 11 chrU 3447405 3447670 -6601367 - FB4_DM DNA Tc1 -467 3622 3361 6 611 4643 77 242 10 chrU 3447724 3448592 -6600445 - FB4_DM DNA Tc1 -3020 1069 1 6 611 24 53 0 0 chrU 3448990 3449028 -6600009 + AT_rich Low_complexity Low_complexity 1 38 0 6 611 679 68 0 11 chrU 3449709 3449798 -6599239 + DMCR1A LINE CR1 3429 3516 -954 6 611 1744 79 19 23 chrU 3449798 3450058 -6598979 - DMCR1A LINE CR1 -2588 1882 1624 6 611 845 208 42 16 chrU 3450158 3450349 -6598688 + DMLTR5 LTR Gypsy 49 244 -22 6 611 2616 128 184 0 chrU 3450355 3450889 -6598148 + HMSBEAGLE_I LTR Gypsy 1236 1867 -4662 6 611 1725 128 46 0 chrU 3450896 3451177 -6597860 + HMSBEAGLE_I LTR Gypsy 1986 2279 -4250 6 611 7480 174 69 1 chrU 3451182 3452790 -6596247 + HMSBEAGLE_I LTR Gypsy 2640 4357 -2172 6 611 1473 129 104 0 chrU 3452787 3453028 -6596009 + HMSBEAGLE_I LTR Gypsy 4613 4878 -1651 6 611 232 100 0 0 chrU 3453027 3453057 -6595980 + HMSBEAGLE_I LTR Gypsy 5191 5220 -1309 6 611 1824 73 68 0 chrU 3453068 3453316 -6595721 - DMCR1A LINE CR1 -2889 1581 1317 6 611 501 88 0 14 chrU 3453309 3453378 -6595659 - DMCR1A LINE CR1 -3384 1086 1019 6 611 330 64 21 0 chrU 3453377 3453424 -6595613 - G3_DM LINE Jockey -4557 48 1 6 611 263 366 12 24 chrU 3453733 3453901 -6595136 - DIVER2_I LTR Pao -249 3898 3733 6 611 552 315 15 15 chrU 3454143 3454349 -6594688 - DIVER2_I LTR Pao -788 3359 3154 6 611 235 229 186 0 chrU 3454495 3454565 -6594472 + HMSBEAGLE_I LTR Gypsy 2919 3001 -3528 6 611 5135 173 30 2 chrU 3454611 3455496 -6593541 + HMSBEAGLE_I LTR Gypsy 3105 4014 -2515 6 611 3805 54 118 6 chrU 3462961 3463501 -6585536 - FB4_DM DNA Tc1 -3488 601 1 6 611 713 75 0 0 chrU 3464345 3464438 -6584599 - G3_DM LINE Jockey -4512 93 1 6 611 226 71 0 0 chrU 3464495 3464523 -6584514 - G3_DM LINE Jockey -4572 33 6 6 611 387 146 207 0 chrU 3464745 3464827 -6584210 + DMRT1A LINE R1 4 102 -5081 6 611 657 94 94 0 chrU 3464824 3464930 -6584107 + DMRT1A LINE R1 261 376 -4807 6 611 2120 72 0 11 chrU 3464961 3465243 -6583794 + DMRT1A LINE R1 537 815 -4368 6 611 2882 78 281 2 chrU 3465263 3466741 -6582296 + DMRT1A LINE R1 1192 3082 -2101 6 611 1152 291 87 18 chrU 3466732 3467240 -6581797 - MICROPIA_I LTR Gypsy -1568 2908 2366 6 611 796 288 33 4 chrU 3467237 3467478 -6581559 - MICROPIA_I LTR Gypsy -2832 1644 1397 6 611 261 329 74 42 chrU 3467547 3467763 -6581274 - ACCORD2_I LTR Gypsy -6451 761 539 6 611 2020 78 26 0 chrU 3467845 3468116 -6580921 - STALKER4_LTR LTR Gypsy -124 278 1 6 611 522 118 29 108 chrU 3468116 3468298 -6580739 - STALKER4_I LTR Gypsy 0 6530 6388 6 611 426 177 13 0 chrU 3468365 3468444 -6580593 + ROVER-I_DM LTR Gypsy 1 80 -6504 6 611 22 70 0 0 chrU 3468489 3468532 -6580505 + AT_rich Low_complexity Low_complexity 1 43 0 6 611 421 22 0 0 chrU 3469265 3469311 -6579726 + G_DM LINE Jockey 3102 3147 -1199 6 611 371 169 14 0 chrU 3469316 3469387 -6579650 + G2_DM LINE Jockey 2855 2926 -176 6 611 21 36 0 0 chrU 3469656 3469684 -6579353 + AT_rich Low_complexity Low_complexity 1 28 0 6 611 198 50 110 24 chrU 3469684 3469766 -6579271 + (TTATA)n Simple_repeat Simple_repeat 4 92 0 6 611 23 54 0 0 chrU 3469766 3469803 -6579234 + AT_rich Low_complexity Low_complexity 1 37 0 6 611 280 31 0 0 chrU 3470412 3470444 -6578593 + NTS_DM Other Other 2 33 -207 6 611 21 0 0 0 chrU 3470460 3470481 -6578556 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 637 39 13 0 chrU 3471224 3471302 -6577735 + G2_DM LINE Jockey 1797 1875 -1227 6 611 405 155 14 0 chrU 3471307 3471378 -6577659 + G2_DM LINE Jockey 2855 2926 -176 6 611 8301 9 30 3 chrU 3471636 3472796 -6576241 + DOC LINE Jockey 32 1222 -3503 6 611 227 124 122 10 chrU 3472816 3472914 -6576123 + (TTATA)n Simple_repeat Simple_repeat 2 110 0 6 611 24 0 0 0 chrU 3474177 3474201 -6574836 + AT_rich Low_complexity Low_complexity 1 24 0 6 611 264 62 0 0 chrU 3474698 3474730 -6574307 + NTS_DM Other Other 2 33 -207 6 611 21 0 0 0 chrU 3474746 3474767 -6574270 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 189 0 0 0 chrU 3475639 3475660 -6573377 + (TAGA)n Simple_repeat Simple_repeat 1 21 0 6 611 24 32 0 0 chrU 3475701 3475732 -6573305 + AT_rich Low_complexity Low_complexity 1 31 0 6 611 24 53 0 0 chrU 3475941 3475979 -6573058 + AT_rich Low_complexity Low_complexity 1 38 0 6 611 280 31 0 0 chrU 3476746 3476778 -6572259 + NTS_DM Other Other 2 33 -207 6 611 21 0 0 0 chrU 3476794 3476815 -6572222 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 21 0 0 0 chrU 3476848 3476869 -6572168 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 21 0 0 0 chrU 3478027 3478048 -6570989 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 239 61 0 0 chrU 3478240 3478273 -6570764 - TART_B1 LINE telomeric -5260 5394 5362 6 611 971 92 0 14 chrU 3478268 3478412 -6570625 - G5_DM LINE Jockey -58 4798 4657 6 611 2145 286 47 25 chrU 3478641 3479522 -6569515 + G6_DM LINE Jockey 243 1142 -900 6 611 3375 78 30 3 chrU 3479521 3480023 -6569014 + G2_DM LINE Jockey 139 537 -2565 6 611 12040 81 14 7 chrU 3480023 3481873 -6567164 + G2_DM LINE Jockey 1170 4346 0 6 611 1963 31 0 0 chrU 3481885 3482111 -6566926 - DOC2_DM LINE Jockey -600 4193 3968 6 611 6677 17 23 0 chrU 3482109 3482881 -6566156 - DOC2_DM LINE Jockey -1109 3684 2895 6 611 3916 109 21 2 chrU 3482880 3483404 -6565633 - DOC2_DM LINE Jockey -2649 2144 1611 6 611 5862 37 64 61 chrU 3483403 3484278 -6564759 - DOC2_DM LINE Jockey -3685 1108 188 6 611 21 0 0 0 chrU 3484482 3484503 -6564534 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 21 0 0 0 chrU 3484569 3484590 -6564447 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 1826 35 65 4 chrU 3485283 3485515 -6563522 + G2_DM LINE Jockey 1160 1405 -1697 6 611 9508 52 21 0 chrU 3485512 3486691 -6562346 - G2_DM LINE Jockey -165 2937 1734 6 611 2236 88 163 0 chrU 3486683 3487026 -6562011 - G2_DM LINE Jockey -1877 1225 827 6 611 966 96 0 0 chrU 3487045 3487211 -6561826 + (ATAAG)n Simple_repeat Simple_repeat 2 167 0 6 611 2845 91 8 36 chrU 3488325 3490357 -6558680 - DMSAT6 Satellite Satellite 0 1976 1 6 611 3932 78 14 45 chrU 3490377 3496252 -6552785 - DMSAT6 Satellite Satellite -3 5692 1 6 611 2725 95 8 19 chrU 3496274 3496745 -6552292 - DMSAT6 Satellite Satellite 0 470 5 6 611 1445 97 56 8 chrU 3496758 3497008 -6552029 - DMSAT6 Satellite Satellite -71 399 138 6 611 3741 26 2 0 chrU 3497061 3497487 -6551550 + ROO_LTR LTR Pao 1 427 -1 6 611 6009 25 28 20 chrU 3497488 3498558 -6550479 + ROO_I LTR Pao 1 1182 -7074 6 611 1553 22 0 0 chrU 3500033 3500214 -6548823 + ROO_I LTR Pao 3022 3202 -5054 6 611 13983 21 9 1 chrU 3500214 3501852 -6547185 + ROO_I LTR Pao 6605 8256 0 6 611 3738 30 2 0 chrU 3501852 3502279 -6546758 + ROO_LTR LTR Pao 1 428 0 6 611 2944 49 27 5 chrU 3502281 3502652 -6546385 - STALKER4_LTR LTR Gypsy -23 379 1 6 611 7023 59 38 27 chrU 3502652 3503678 -6545359 - STALKER4_I LTR Gypsy 0 6530 5494 6 611 4416 34 4 8 chrU 3503664 3504199 -6544838 - STALKER4_I LTR Gypsy -1679 4851 4319 6 611 2648 72 18 32 chrU 3504197 3505609 -6543428 - DMSAT6 Satellite Satellite -39 1391 1 6 611 40 21 0 0 chrU 3506247 3506294 -6542743 + AT_rich Low_complexity Low_complexity 1 47 0 6 611 1440 117 58 4 chrU 3506804 3507045 -6541992 - STALKER4_LTR LTR Gypsy -148 254 1 6 611 1244 84 111 0 chrU 3507048 3507238 -6541799 + HETA LINE telomeric 5871 6081 0 6 611 328 47 0 0 chrU 3507239 3507282 -6541755 + TAHRE LINE telomeric 10416 10458 -5 6 611 1425 131 5 0 chrU 3507277 3507491 -6541546 + HETA LINE telomeric 2890 3104 -2977 6 611 292 192 0 0 chrU 3507513 3507565 -6541472 + HELENA LINE Jockey 469 520 -141 6 611 5736 57 57 0 chrU 3507582 3508335 -6540702 + BS2 LINE Jockey 3545 4340 -381 6 611 1709 83 41 0 chrU 3508334 3508576 -6540461 + BS2 LINE Jockey 4470 4721 0 6 611 26 0 0 0 chrU 3508685 3508711 -6540326 + AT_rich Low_complexity Low_complexity 1 26 0 6 611 5136 214 12 47 chrU 3508748 3509865 -6539172 + Gypsy_I LTR Gypsy 452 1530 -4977 6 611 407 247 41 0 chrU 3509854 3509951 -6539086 + Gypsy_I LTR Gypsy 1654 1754 -4753 6 611 5587 152 41 2 chrU 3509950 3510997 -6538040 + Gypsy_I LTR Gypsy 2085 3336 -3171 6 611 8202 163 56 3 chrU 3510988 3512550 -6536487 + Gypsy_I LTR Gypsy 3696 5429 -2093 6 611 896 209 0 0 chrU 3512754 3512926 -6536111 + Gypsy_I LTR Gypsy 6045 6216 -1306 6 611 1811 226 16 3 chrU 3512945 3513331 -6535706 + Gypsy_I LTR Gypsy 6116 6506 -1 6 611 1015 212 56 69 chrU 3513336 3513696 -6535341 + Gypsy_LTR LTR Gypsy 1 355 -127 6 611 1793 109 3 147 chrU 3513714 3514089 -6534948 + Stalker2_LTR LTR Gypsy 52 421 -3 6 611 298 115 0 37 chrU 3514089 3514143 -6534894 + Stalker2_I LTR Gypsy 1 52 -7350 6 611 252 74 148 0 chrU 3514349 3514403 -6534634 + Stalker2_I LTR Gypsy 242 303 -7099 6 611 389 112 100 0 chrU 3514450 3514530 -6534507 + Stalker2_I LTR Gypsy 242 329 -7073 6 611 8469 274 65 21 chrU 3520331 3523546 -6525491 + STALKER4_I LTR Gypsy 2384 5630 -900 6 611 5893 43 0 42 chrU 3523650 3524442 -6524595 + MAX_I LTR Pao 7156 7914 0 6 611 1475 137 159 0 chrU 3524445 3524722 -6524315 + MAX_LTR LTR Pao 1 321 0 6 611 1213 227 84 30 chrU 3524722 3525162 -6523875 - Gypsy12_LTR LTR Gypsy -440 1896 1433 6 611 1846 213 38 44 chrU 3525195 3525745 -6523292 - Gypsy12_LTR LTR Gypsy -962 1374 828 6 611 2217 96 138 3 chrU 3525788 3526412 -6522625 + Invader4_I LTR Gypsy 384 1078 -3021 6 611 649 25 13 0 chrU 3526576 3526655 -6522382 + Invader4_I LTR Gypsy 2334 2413 0 6 611 488 121 12 35 chrU 3526655 3526741 -6522296 + Invader4_LTR LTR Gypsy 1 84 -262 6 611 3967 127 162 61 chrU 3526727 3527705 -6521332 + PROTOP_A DNA P 30 1105 0 6 611 12050 3 0 0 chrU 3527898 3529203 -6519834 - DMRT1B LINE R1 0 5183 3879 6 611 13421 12 5 1 chrU 3532035 3533555 -6515482 - DMRT1B LINE R1 -3696 1487 1 6 611 349 145 0 0 chrU 3533969 3534038 -6514999 + ZAM_LTR LTR Gypsy 1 69 -403 6 611 230 313 15 15 chrU 3534101 3534169 -6514868 + NOMAD_I LTR Gypsy 573 640 -5932 6 611 201 179 35 18 chrU 3534330 3534387 -6514650 + A-rich Low_complexity Low_complexity 5 62 0 6 611 21 0 0 0 chrU 3534590 3534611 -6514426 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 257 355 27 0 chrU 3534841 3534951 -6514086 + NOMAD_I LTR Gypsy 1344 1456 -5116 6 611 901 337 83 22 chrU 3535026 3535533 -6513504 + NOMAD_I LTR Gypsy 1658 2195 -4377 6 611 874 336 37 22 chrU 3535648 3536102 -6512935 + NOMAD_I LTR Gypsy 2349 2809 -3763 6 611 6087 98 45 8 chrU 3536224 3537140 -6511897 + Invader4_I LTR Gypsy 152 1099 -2087 6 611 235 86 0 0 chrU 3537179 3537214 -6511823 + Invader4_I LTR Gypsy 2262 2296 -117 6 611 649 25 13 0 chrU 3537289 3537368 -6511669 + Invader4_I LTR Gypsy 2334 2413 0 6 611 493 96 14 14 chrU 3537368 3537442 -6511595 + Invader4_LTR LTR Gypsy 1 74 -272 6 611 3768 49 11 0 chrU 3537440 3537909 -6511128 + PROTOP_B DNA P 30 503 -650 6 611 186 43 0 0 chrU 3537919 3537942 -6511095 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 611 399 108 0 30 chrU 3537974 3538032 -6511005 - DMTOM1_LTR LTR Gypsy -6 404 349 6 611 539 148 38 83 chrU 3538032 3538165 -6510872 - DMTOM1_LTR LTR Gypsy 0 410 284 6 611 266 206 59 0 chrU 3538182 3538250 -6510787 - DM176_LTR LTR Gypsy -141 366 295 6 611 272 215 11 151 chrU 3538358 3538451 -6510586 - DM176_LTR LTR Gypsy -238 269 190 6 611 21 0 0 0 chrU 3538508 3538529 -6510508 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 729 73 0 0 chrU 3538541 3538650 -6510387 - DMCR1A LINE CR1 -102 4368 4260 6 76 9470 51 8 31 chrU 3538937 3540176 -6508861 - DMCR1A LINE CR1 -179 4291 3082 6 612 32 103 0 0 chrU 3540711 3540827 -6508210 + AT_rich Low_complexity Low_complexity 1 116 0 6 612 1836 9 13 0 chrU 3541555 3541786 -6507251 + STALKER4_I LTR Gypsy 6297 6530 0 6 612 3390 48 1 17 chrU 3541786 3542226 -6506811 + STALKER4_LTR LTR Gypsy 1 399 -3 6 612 969 107 41 18 chrU 3542230 3542401 -6506636 + NTS_DM Other Other 7 181 -59 6 612 26 50 0 0 chrU 3542467 3542507 -6506530 + AT_rich Low_complexity Low_complexity 1 40 0 6 612 23 33 0 0 chrU 3542711 3542741 -6506296 + AT_rich Low_complexity Low_complexity 1 30 0 6 612 32 0 0 0 chrU 3542834 3542866 -6506171 + AT_rich Low_complexity Low_complexity 1 32 0 6 612 9301 78 21 5 chrU 3542872 3544301 -6504736 + G2_DM LINE Jockey 1594 4346 0 6 612 22 70 0 0 chrU 3544341 3544384 -6504653 + AT_rich Low_complexity Low_complexity 1 43 0 6 612 238 216 0 19 chrU 3544397 3544449 -6504588 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 6 612 251 171 0 0 chrU 3544489 3544530 -6504507 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2580 6 612 294 125 21 0 chrU 3544542 3544590 -6504447 - LSU-rRNA_Dme rRNA rRNA 0 3900 3852 6 612 2025 93 10 47 chrU 3544576 3544961 -6504076 - PROTOP_B DNA P -265 888 518 6 612 2719 58 38 3 chrU 3544934 3545299 -6503738 - PROTOP_B DNA P -775 378 1 6 612 7178 23 24 0 chrU 3545299 3546119 -6502918 - LSU-rRNA_Dme rRNA rRNA -456 3444 2605 6 612 19088 88 3 4 chrU 3546117 3549115 -6499922 + G2_DM LINE Jockey 4 3567 -779 6 612 22 0 0 0 chrU 3549147 3549169 -6499868 + AT_rich Low_complexity Low_complexity 1 22 0 6 612 2192 139 56 26 chrU 3549573 3549963 -6499074 - GTWIN_LTR LTR Gypsy -93 402 1 6 612 45050 102 23 18 chrU 3549970 3556357 -6492680 - GTWIN_I LTR Gypsy -1 6420 1 6 612 1864 144 108 27 chrU 3556514 3556886 -6492151 - GTWIN_LTR LTR Gypsy -93 402 1 6 612 23 68 0 0 chrU 3557139 3557183 -6491854 + AT_rich Low_complexity Low_complexity 1 44 0 6 612 21 57 0 0 chrU 3557417 3557452 -6491585 + AT_rich Low_complexity Low_complexity 1 35 0 6 612 28 79 0 0 chrU 3557667 3557730 -6491307 + AT_rich Low_complexity Low_complexity 1 63 0 6 612 13105 16 1 17 chrU 3557743 3559305 -6489732 + LSU-rRNA_Dme rRNA rRNA 2 1538 -2362 6 612 971 18 0 0 chrU 3559406 3559517 -6489520 + Gypsy_I LTR Gypsy 6397 6507 0 6 612 4096 27 4 2 chrU 3559517 3559998 -6489039 + Gypsy_LTR LTR Gypsy 1 482 0 6 612 726 44 0 0 chrU 3559998 3560089 -6488948 - DM1731_LTR LTR Copia -219 117 27 6 612 5022 71 1 0 chrU 3560090 3560779 -6488258 - I_DM LINE I -1242 4989 4300 6 612 713 271 44 31 chrU 3560910 3561231 -6487806 + Gypsy4_I LTR Gypsy 2431 2683 -3605 6 612 878 44 66 0 chrU 3561167 3561304 -6487733 + TLD2 Unknown Unknown 1 146 -72 6 612 39 92 0 0 chrU 3563592 3563701 -6485336 + AT_rich Low_complexity Low_complexity 1 109 0 6 612 41 21 0 0 chrU 3564271 3564319 -6484718 + AT_rich Low_complexity Low_complexity 1 48 0 6 612 2264 122 13 2 chrU 3564335 3564731 -6484306 + STALKER4_I LTR Gypsy 5833 6232 -298 6 612 17419 8 3 0 chrU 3565088 3567031 -6482006 - DM1731_I LTR Copia -1201 2775 828 6 612 1494 28 6 6 chrU 3567028 3567209 -6481828 - DM1731_I LTR Copia -3795 181 1 6 612 2578 39 0 0 chrU 3567209 3567518 -6481519 - DM1731_LTR LTR Copia -1 335 27 6 612 15950 69 9 2 chrU 3567519 3569700 -6479337 - I_DM LINE I -1242 4989 2793 6 612 325 121 17 0 chrU 3569753 3569811 -6479226 + STALKER4_I LTR Gypsy 6472 6530 0 6 612 604 81 20 10 chrU 3569811 3569911 -6479126 + STALKER4_LTR LTR Gypsy 1 101 -301 6 612 795 40 0 29 chrU 3569911 3570014 -6479023 + Invader4_LTR LTR Gypsy 1 100 -246 6 612 3918 83 47 24 chrU 3570024 3570604 -6478433 + Invader4_I LTR Gypsy 366 958 -1455 6 612 1657 284 15 27 chrU 3570793 3571917 -6477120 + Invader4_I LTR Gypsy 1021 2303 -1796 6 612 267 224 45 0 chrU 3571936 3572003 -6477034 + Invader4_I LTR Gypsy 1301 1370 -1816 6 612 1105 263 9 6 chrU 3572075 3572412 -6476625 + Invader4_I LTR Gypsy 1492 1829 -1357 6 612 398 223 71 16 chrU 3572411 3572559 -6476478 + MICROPIA_I LTR Gypsy 3181 3319 -1157 6 612 2365 107 64 22 chrU 3572557 3573140 -6475897 + Invader4_I LTR Gypsy 1665 2413 0 6 612 2222 106 42 3 chrU 3573140 3573471 -6475566 + Invader4_LTR LTR Gypsy 1 344 -2 6 612 1973 84 7 11 chrU 3573472 3573750 -6475287 + STALKER4_LTR LTR Gypsy 97 373 -29 6 612 5055 140 85 27 chrU 3573802 3574963 -6474074 - FW3_DM LINE Jockey -2995 966 3 6 612 1366 169 119 12 chrU 3574930 3575332 -6473705 - DOC4_DM LINE Jockey -2346 445 1 6 612 27 49 0 0 chrU 3575339 3575380 -6473657 + AT_rich Low_complexity Low_complexity 1 41 0 6 612 2291 113 32 6 chrU 3575482 3575828 -6473209 - DMRT1A LINE R1 -4826 357 3 6 612 5739 24 83 1 chrU 3577040 3578149 -6470888 + Copia2_I LTR Copia 2962 4162 0 6 612 1618 0 0 0 chrU 3578156 3578336 -6470701 + Copia2_LTR_DM LTR Copia 19 198 0 6 612 26 0 0 0 chrU 3579039 3579065 -6469972 + AT_rich Low_complexity Low_complexity 1 26 0 6 612 1468 221 113 8 chrU 3579191 3579694 -6469343 + DM297_I LTR Gypsy 1530 2085 -4082 6 612 1078 214 133 6 chrU 3579704 3580028 -6469009 + IDEFIX_I LTR Gypsy 2048 2412 -3216 6 612 263 314 72 98 chrU 3588126 3588543 -6460494 + Gypsy12_I LTR Gypsy 1478 1883 -3663 6 612 235 239 54 54 chrU 3588648 3588741 -6460296 + Gypsy12_I LTR Gypsy 2014 2106 -3440 6 612 254 279 0 12 chrU 3589079 3589159 -6459878 + TV1I LTR Gypsy 2791 2869 -3094 6 612 516 234 31 0 chrU 3589175 3589303 -6459734 + IDEFIX_I LTR Gypsy 2611 2742 -2886 6 612 1698 255 21 4 chrU 3589339 3589855 -6459182 + TV1I LTR Gypsy 2442 2966 -2997 6 612 844 234 33 22 chrU 3589855 3590130 -6458907 + QUASIMODO_I LTR Gypsy 3144 3421 -2639 6 612 261 267 40 0 chrU 3590148 3590223 -6458814 + TV1I LTR Gypsy 3697 3774 -2189 6 612 1407 249 54 29 chrU 3590305 3590883 -6458154 + TV1I LTR Gypsy 3902 4493 -1470 6 612 460 299 57 5 chrU 3591660 3591852 -6457185 + TV1I LTR Gypsy 768 969 -4994 6 612 384 292 38 25 chrU 3592015 3592272 -6456765 + TV1I LTR Gypsy 1160 1461 -4599 6 612 3273 254 39 26 chrU 3592489 3593562 -6455475 + TV1I LTR Gypsy 1886 2972 -2991 6 612 2269 263 34 24 chrU 3593556 3594405 -6454632 + QUASIMODO_I LTR Gypsy 3144 4001 -2059 6 612 393 321 44 71 chrU 3594541 3594836 -6454201 - Gypsy6_I LTR Gypsy -5289 1723 1437 6 612 2391 179 7 13 chrU 3595212 3595670 -6453367 + HETA LINE telomeric 5627 6081 0 6 612 1730 196 194 44 chrU 3595664 3596230 -6452807 + TAHRE LINE telomeric 6557 7207 -3256 6 612 672 210 10 72 chrU 3596265 3596460 -6452577 + TART LINE telomeric 10104 10286 -4191 6 612 3178 176 48 125 chrU 3596485 3597447 -6451590 + HETA LINE telomeric 422 1309 -4772 6 612 3703 12 0 0 chrU 3597447 3597876 -6451161 - FW_DM LINE Jockey -2 4690 4262 6 612 2615 169 59 28 chrU 3597972 3598515 -6450522 + TART LINE telomeric 10104 10663 -3814 6 612 371 23 0 0 chrU 3598539 3598582 -6450455 + TART LINE telomeric 10620 10662 -3815 6 612 1329 198 12 50 chrU 3598572 3598988 -6450049 + TAHRE LINE telomeric 20 419 -10044 6 612 13847 19 16 0 chrU 3599741 3601353 -6447684 - FW_DM LINE Jockey -393 4299 2662 6 612 889 146 5 68 chrU 3607405 3607625 -6441412 + TAHRE LINE telomeric 120 325 -10138 6 612 773 204 0 12 chrU 3607627 3607791 -6441246 + TAHRE LINE telomeric 9855 10016 -447 6 612 638 153 22 30 chrU 3607933 3608068 -6440969 - Gypsy5_LTR LTR Gypsy -141 289 156 6 612 9879 164 23 3 chrU 3608065 3610832 -6438205 - Gypsy5_I LTR Gypsy -685 5824 2957 6 612 4121 158 0 4 chrU 3610831 3611544 -6437493 - Gypsy5_I LTR Gypsy -3878 2631 1922 6 612 532 178 339 0 chrU 3611665 3611906 -6437131 - PROTOP DNA P -200 4280 3959 6 612 228 122 24 0 chrU 3611905 3611946 -6437091 - PROTOP DNA P -3565 915 874 6 612 1355 161 14 21 chrU 3612445 3612730 -6436307 - PROTOP_B DNA P -4 1149 867 6 612 2224 35 10 0 chrU 3612848 3613138 -6435899 - Gypsy7_I LTR Gypsy -1077 3907 3615 6 612 8978 62 23 24 chrU 3613139 3614440 -6434597 - Gypsy7_I LTR Gypsy -1650 3334 2035 6 612 3064 48 21 19 chrU 3614445 3614868 -6434169 - Gypsy7_I LTR Gypsy -3557 1427 1004 6 612 2572 66 70 38 chrU 3614872 3615299 -6433738 - Gypsy7_I LTR Gypsy -4543 441 1 6 612 1626 79 0 12 chrU 3615303 3615547 -6433490 - Gypsy7_LTR LTR Gypsy -10 241 1 6 612 753 275 29 22 chrU 3615951 3616267 -6432770 + Copia_I LTR Copia 390 707 -3886 6 612 701 252 90 23 chrU 3616355 3616656 -6432381 - Copia_I LTR Copia -2452 2141 1821 6 612 530 219 0 0 chrU 3616655 3616783 -6432254 + Copia_I LTR Copia 4200 4327 -266 6 612 275 215 35 81 chrU 3616982 3617068 -6431969 + Copia_I LTR Copia 4438 4519 -74 6 612 2542 55 13 61 chrU 3617155 3617546 -6431491 - Stalker3_LTR LTR Gypsy 0 372 1 6 612 337 47 25 31 chrU 3617546 3617629 -6431408 - STALKER4_I LTR Gypsy 0 6530 6491 6 612 220 219 57 9 chrU 3617633 3617739 -6431298 + T-rich Low_complexity Low_complexity 6 116 0 6 612 21 57 0 0 chrU 3617792 3617827 -6431210 + AT_rich Low_complexity Low_complexity 1 35 0 6 612 696 282 3 14 chrU 3617980 3618336 -6430701 - Gypsy11_I LTR Gypsy -137 3387 3036 6 612 243 245 39 10 chrU 3622301 3622404 -6426633 - MDG1_I LTR Gypsy -4743 1853 1748 6 612 3325 141 29 14 chrU 3623311 3623943 -6425094 - Stalker2_I LTR Gypsy -6520 882 242 6 612 289 96 0 37 chrU 3624144 3624198 -6424839 - Stalker2_I LTR Gypsy -7350 52 1 6 612 2681 41 13 47 chrU 3624198 3624583 -6424454 - Stalker3_LTR LTR Gypsy 0 372 1 6 612 315 153 56 0 chrU 3624867 3624939 -6424098 - PROTOP DNA P -3596 884 809 6 612 319 271 21 10 chrU 3624955 3625051 -6423986 - Gypsy_LTR LTR Gypsy -356 126 30 6 612 1163 239 3 3 chrU 3625051 3625344 -6423693 - Gypsy_I LTR Gypsy -3 6504 6246 6 612 5626 5 0 0 chrU 3625424 3626082 -6422955 + QUASIMODO_LTR LTR Gypsy 1 658 0 6 612 3786 9 15 19 chrU 3626082 3626558 -6422479 + QUASIMODO_I LTR Gypsy 1 474 -5586 6 612 16569 9 0 5 chrU 3626556 3628575 -6420462 + QUASIMODO_I LTR Gypsy 657 2664 -3396 6 612 6124 7 1 0 chrU 3628675 3629436 -6419601 + Invader2_I LTR Gypsy 3831 4592 0 6 612 2294 8 0 0 chrU 3629436 3629702 -6419335 + Invader2_LTR LTR Gypsy 1 266 0 6 612 12869 16 33 1 chrU 3629703 3631339 -6417698 + Invader2_I LTR Gypsy 3 1691 -2901 6 612 47 0 0 0 chrU 3640417 3640464 -6408573 + AT_rich Low_complexity Low_complexity 1 47 0 6 612 571 62 0 0 chrU 3640480 3640561 -6408476 + DMRT1A LINE R1 5095 5175 -8 6 612 2380 36 3 19 chrU 3640568 3640878 -6408159 + PROTOP DNA P 4176 4480 0 6 612 12256 35 30 1 chrU 3640878 3642998 -6406039 + DMCR1A LINE CR1 1639 3862 -608 6 612 7277 82 91 0 chrU 3642993 3644118 -6404919 + IDEFIX_I LTR Gypsy 1054 2280 -3348 6 612 1900 299 51 10 chrU 3644379 3645068 -6403969 - Gypsy6_I LTR Gypsy -5185 1827 1111 6 612 913 18 0 26 chrU 3645313 3645430 -6403607 - BATUMI_I LTR Pao -679 7284 7171 6 612 2501 29 3 3 chrU 3645530 3645845 -6403192 - R1_DM LINE R1 -1338 4018 3704 6 612 17824 41 22 5 chrU 3645837 3648161 -6400876 - R1_DM LINE R1 -2991 2365 1 6 612 426 55 0 0 chrU 3648161 3648216 -6400821 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 6 612 25779 27 5 1 chrU 3648215 3651351 -6397686 - R2_DM LINE R2 0 3607 461 6 612 13049 121 31 37 chrU 3651354 3653324 -6395713 - LSU-rRNA_Dme rRNA rRNA -1941 1959 1 6 612 21 95 0 0 chrU 3653336 3653399 -6395638 + AT_rich Low_complexity Low_complexity 1 63 0 6 612 28 29 0 0 chrU 3653425 3653460 -6395577 + AT_rich Low_complexity Low_complexity 1 35 0 6 612 461 120 98 0 chrU 3657215 3657307 -6391730 - NTS_DM Other Other -136 104 4 6 612 1252 37 0 0 chrU 3657418 3657580 -6391457 - NTS_DM Other Other -78 162 1 6 612 992 32 25 25 chrU 3657580 3657740 -6391297 - NTS_DM Other Other 0 240 81 6 612 851 222 36 5 chrU 3657742 3657964 -6391073 - MICROPIA_LTR LTR Gypsy 0 476 248 6 612 601 97 23 171 chrU 3657967 3658142 -6390895 - MICROPIA_LTR LTR Gypsy -172 304 156 6 612 3051 124 9 99 chrU 3658163 3658817 -6390220 - MICROPIA_I LTR Gypsy 0 4476 3882 6 612 6099 34 34 2 chrU 3658842 3659640 -6389397 - TRANSIB2 DNA Transib -995 1849 1027 6 612 4403 49 64 5 chrU 3659646 3660285 -6388752 - TRANSIB2 DNA Transib -2160 684 8 6 612 1766 83 63 15 chrU 3660292 3660560 -6388477 - MICROPIA_I LTR Gypsy -1027 3449 3169 6 612 1150 144 16 29 chrU 3660562 3660779 -6388258 + Gypsy8_LTR LTR Gypsy 1 214 -90 6 612 1254 120 8 45 chrU 3660779 3661024 -6388013 + Gypsy8_I LTR Gypsy 1 236 -4111 6 612 722 224 62 56 chrU 3661472 3661801 -6387236 - G_DM LINE Jockey -1705 337 2 6 612 3158 61 9 0 chrU 3661802 3662231 -6386806 - G2_DM LINE Jockey -2380 722 290 6 612 7032 27 23 0 chrU 3662331 3663215 -6385822 + DMRT1B LINE R1 1665 2568 -2615 6 612 4897 34 113 0 chrU 3663206 3663949 -6385088 + DMRT1B LINE R1 4357 5183 0 6 612 3744 76 44 5 chrU 3663953 3664520 -6384517 + IDEFIX_LTR LTR Gypsy 6 594 0 6 612 4975 184 18 15 chrU 3665032 3666062 -6382975 + IDEFIX_I LTR Gypsy 1 1034 -4594 6 612 3477 105 8 0 chrU 3666049 3666573 -6382464 + IDEFIX_I LTR Gypsy 1137 1664 -3964 6 612 3348 135 36 7 chrU 3666567 3667126 -6381911 + IDEFIX_I LTR Gypsy 1918 2492 -3136 6 612 5502 120 5 12 chrU 3667145 3668025 -6381012 + IDEFIX_I LTR Gypsy 2615 3487 -2141 6 612 9957 9 0 1 chrU 3668019 3669127 -6379910 - Gypsy6_I LTR Gypsy -1768 5244 4138 6 613 1199 29 0 0 chrU 3676674 3676814 -6372223 - PROTOP DNA P -1 4479 4340 6 613 1254 71 4 19 chrU 3676811 3677066 -6371971 - PROTOP DNA P -371 4109 3940 6 613 305 49 0 0 chrU 3677077 3677118 -6371919 - PROTOP DNA P -3426 1054 1014 6 613 33 85 0 0 chrU 3677130 3677212 -6371825 + AT_rich Low_complexity Low_complexity 1 82 0 6 613 3257 57 9 2 chrU 3677395 3677820 -6371217 - DMRT1C LINE R1 -1028 4415 3988 6 613 568 52 0 0 chrU 3677813 3677890 -6371147 - QUASIMODO_LTR LTR Gypsy -581 77 1 6 613 755 0 0 0 chrU 3678419 3678503 -6370534 + DM1731_LTR LTR Copia 1 84 -252 6 613 2551 0 3 0 chrU 3678506 3678790 -6370247 + DM1731_I LTR Copia 1 285 -3691 6 613 2044 47 0 30 chrU 3678890 3679155 -6369882 + DMCR1A LINE CR1 1753 2009 -2461 6 613 1819 50 222 0 chrU 3679152 3679552 -6369485 + DMCR1A LINE CR1 2112 2600 -1870 6 613 4917 61 8 25 chrU 3679552 3680223 -6368814 + DMCR1A LINE CR1 2823 3481 -989 6 613 969 41 0 0 chrU 3680219 3680340 -6368697 + DMCR1A LINE CR1 3708 3828 -642 6 613 2927 29 6 0 chrU 3680341 3680691 -6368346 - G5_DM LINE Jockey 0 4856 4505 6 613 3379 55 63 5 chrU 3680691 3681258 -6367779 + DMCR1A LINE CR1 3815 4447 -23 6 613 290 298 31 108 chrU 3681248 3681534 -6367503 - Gypsy_DS LTR Gypsy -4374 3148 2995 6 613 270 335 24 24 chrU 3682756 3682921 -6366116 - Gypsy4_I LTR Gypsy -5289 999 835 6 613 25 31 0 0 chrU 3683038 3683070 -6365967 + AT_rich Low_complexity Low_complexity 1 32 0 6 613 30 27 0 0 chrU 3683550 3683587 -6365450 + AT_rich Low_complexity Low_complexity 1 37 0 6 613 1059 157 67 0 chrU 3683939 3684162 -6364875 + PROTOP_B DNA P 192 429 -724 6 613 2222 54 0 29 chrU 3684163 3684469 -6364568 + DOC3_DM LINE Jockey 1 297 -4443 6 613 1169 66 24 0 chrU 3684477 3684644 -6364393 + DOC3_DM LINE Jockey 646 816 -3924 6 613 2128 42 4 0 chrU 3684637 3684899 -6364138 + DMCR1A LINE CR1 697 959 -3511 6 613 4395 48 80 20 chrU 3684902 3685499 -6363538 + DMCR1A LINE CR1 1077 1709 -2761 6 613 8690 51 55 4 chrU 3690887 3692042 -6356995 + DOC3_DM LINE Jockey 1334 2547 -2193 6 613 2073 76 22 4 chrU 3692036 3692313 -6356724 + DOC3_DM LINE Jockey 2659 2940 -1800 6 613 4328 79 20 3 chrU 3692308 3692961 -6356076 + DOC3_DM LINE Jockey 3344 4044 -749 6 613 1360 92 0 0 chrU 3692956 3693141 -6355896 + DOC3_DM LINE Jockey 4148 4332 -408 6 613 2026 36 93 4 chrU 3693128 3693408 -6355629 + DOC3_DM LINE Jockey 4436 4740 0 6 613 726 46 0 0 chrU 3693411 3693498 -6355539 + PROTOP_B DNA P 417 503 -650 6 613 257 99 152 11 chrU 3693523 3693615 -6355422 + PROTOP_B DNA P 565 669 -484 6 613 570 42 0 0 chrU 3693624 3693696 -6355341 - I_DM LINE I -764 5467 5396 6 613 4473 4 0 2 chrU 3694063 3694571 -6354466 - DM176_LTR LTR Gypsy 0 507 1 6 613 6364 0 0 0 chrU 3694571 3695332 -6353705 - DM176_I LTR Gypsy 0 6420 5660 6 613 426 0 0 0 chrU 3695433 3695484 -6353553 - Copia_LTR LTR Copia -225 51 1 6 613 24 0 0 0 chrU 3695956 3695980 -6353057 + AT_rich Low_complexity Low_complexity 1 24 0 6 613 209 98 24 0 chrU 3696002 3696043 -6352994 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 6 613 22 0 0 0 chrU 3696086 3696108 -6352929 + AT_rich Low_complexity Low_complexity 1 22 0 6 613 333 262 193 18 chrU 3696148 3696319 -6352718 + FW2_DM LINE Jockey 268 468 -4325 6 613 4722 81 55 5 chrU 3696350 3697084 -6351953 + FW2_DM LINE Jockey 1 1344 -3449 6 613 13549 130 77 44 chrU 3697104 3700140 -6348897 + FW2_DM LINE Jockey 710 3895 -66 6 613 32 67 0 0 chrU 3700659 3700719 -6348318 + AT_rich Low_complexity Low_complexity 1 60 0 6 613 3117 129 72 12 chrU 3701198 3701794 -6347243 - IDEFIX_I LTR Gypsy -143 5485 4854 6 613 491 146 0 11 chrU 3701807 3701897 -6347140 - IDEFIX_I LTR Gypsy -1408 4220 4132 6 613 502 209 0 9 chrU 3702297 3702408 -6346629 - IDEFIX_I LTR Gypsy -1731 3897 3788 6 613 1743 147 59 9 chrU 3702392 3702729 -6346308 - IDEFIX_I LTR Gypsy -2171 3457 3104 6 613 1866 149 23 0 chrU 3705995 3706304 -6342733 - IDEFIX_I LTR Gypsy -3028 2600 2285 6 613 921 155 61 7 chrU 3706315 3706609 -6342428 - IDEFIX_I LTR Gypsy -3959 1669 1333 6 613 1221 175 38 0 chrU 3706609 3706849 -6342188 - IDEFIX_I LTR Gypsy -5174 454 206 6 613 1056 123 34 5 chrU 3706854 3707058 -6341979 + S_DM DNA Tc1 195 404 -1332 6 613 400 140 0 0 chrU 3707073 3707130 -6341907 - S_DM DNA Tc1 -1162 574 518 6 613 4356 120 58 8 chrU 3707131 3707842 -6341195 + S_DM DNA Tc1 604 1349 -387 6 613 1446 116 4 14 chrU 3707862 3708142 -6340895 + S_DM DNA Tc1 1427 1703 -33 6 613 588 175 150 120 chrU 3708147 3708413 -6340624 + ZAM_I LTR Gypsy 549 822 -6668 6 613 257 295 77 73 chrU 3708501 3708735 -6340302 + ACCORD2_I LTR Gypsy 539 773 -6439 6 613 396 320 28 11 chrU 3708751 3708928 -6340109 + MICROPIA_I LTR Gypsy 45 224 -4252 6 613 5356 309 38 30 chrU 3709047 3711516 -6337521 + MICROPIA_I LTR Gypsy 997 3484 -992 6 613 857 293 53 37 chrU 3712103 3712231 -6336806 - DM297_I LTR Gypsy -3195 2972 2828 6 613 1465 29 63 0 chrU 3712231 3712436 -6336601 - TLD2 Unknown Unknown 0 218 1 6 613 857 293 53 37 chrU 3712436 3712880 -6336157 - DM297_I LTR Gypsy -3195 2827 2320 6 613 21 36 0 0 chrU 3713612 3713640 -6335397 + AT_rich Low_complexity Low_complexity 1 28 0 6 613 926 69 0 0 chrU 3721392 3721508 -6327529 - HMSBEAGLE_I LTR Gypsy -1227 5302 5187 6 613 2263 232 14 2 chrU 3721534 3722026 -6327011 - HMSBEAGLE_I LTR Gypsy -3139 3390 2556 6 613 2556 171 18 7 chrU 3722032 3722469 -6326568 - HMSBEAGLE_I LTR Gypsy -3944 2585 2144 6 613 2827 195 93 7 chrU 3722463 3723221 -6325816 - HMSBEAGLE_I LTR Gypsy -4494 2035 1212 6 613 58 47 0 0 chrU 3723392 3723478 -6325559 + AT_rich Low_complexity Low_complexity 1 86 0 6 613 2028 102 38 73 chrU 3723493 3723865 -6325172 - HMSBEAGLE_I LTR Gypsy -6170 359 1 6 613 587 219 47 14 chrU 3723897 3724045 -6324992 - DMLTR5 LTR Gypsy -48 218 66 6 613 1088 105 17 0 chrU 3724150 3724322 -6324715 - STALKER4_LTR LTR Gypsy -227 175 1 6 613 638 325 34 19 chrU 3724683 3725003 -6324034 - NOMAD_I LTR Gypsy -88 6484 6160 6 613 2647 23 0 7 chrU 3725635 3725940 -6323097 + G4_DM LINE Jockey 3103 3405 -451 6 613 522 108 0 0 chrU 3725938 3726021 -6323016 + G4_DM LINE Jockey 3739 3821 -35 6 613 2416 14 0 27 chrU 3726027 3726319 -6322718 + BATUMI_I LTR Pao 7002 7285 -678 6 613 340 319 0 0 chrU 3726447 3726566 -6322471 - NOMAD_I LTR Gypsy -4074 2498 2380 6 613 2640 38 76 6 chrU 3726653 3726994 -6322043 - Gypsy11_LTR LTR Gypsy -1 451 87 6 613 311 113 16 0 chrU 3727065 3727127 -6321910 + (TA)n Simple_repeat Simple_repeat 1 63 0 6 613 1967 75 89 53 chrU 3727127 3727465 -6321572 - IDEFIX_LTR LTR Gypsy -1 593 244 6 613 478 106 0 0 chrU 3727520 3727586 -6321451 - IDEFIX_I LTR Gypsy 0 5628 5563 6 613 2757 98 24 37 chrU 3727686 3728531 -6320506 + DMSAT6 Satellite Satellite 1 833 -74 6 613 2425 138 9 18 chrU 3728551 3729098 -6319939 + DMSAT6 Satellite Satellite 1 541 0 6 613 2742 108 19 36 chrU 3729109 3733697 -6315340 + DMSAT6 Satellite Satellite 1 4510 -3 6 613 3662 2 0 2 chrU 3733684 3734087 -6314950 + STALKER4_LTR LTR Gypsy 1 402 0 6 613 351 25 0 0 chrU 3734087 3734114 -6314923 + STALKER4_I LTR Gypsy 1 27 -6503 6 613 318 96 0 37 chrU 3734114 3734168 -6314869 + Stalker2_I LTR Gypsy 1 52 -7350 6 613 314 54 304 0 chrU 3734342 3734398 -6314639 + Stalker2_I LTR Gypsy 242 314 -7088 6 613 2718 109 9 38 chrU 3741559 3743054 -6305983 + DMSAT6 Satellite Satellite 1 1451 0 6 613 2296 121 10 64 chrU 3743095 3743592 -6305445 + DMSAT6 Satellite Satellite 1 470 0 6 613 18501 98 36 20 chrU 3743702 3746412 -6302625 - Gypsy12_I LTR Gypsy -2794 2752 1 6 613 1909 140 38 6 chrU 3746412 3746729 -6302308 - Gypsy12A_LTR LTR Gypsy 0 2280 1954 6 613 1585 257 23 69 chrU 3746796 3747403 -6301634 + Gypsy12_LTR LTR Gypsy 444 1022 -1314 6 613 1172 249 51 100 chrU 3747430 3747961 -6301076 + Gypsy12_LTR LTR Gypsy 403 907 -1429 6 613 886 170 231 59 chrU 3756822 3757159 -6291878 - G3_DM LINE Jockey -4129 476 82 6 613 275 246 0 0 chrU 3757432 3757493 -6291544 - TRAM_I LTR Pao -1540 1168 1108 6 613 656 97 0 0 chrU 3758256 3758349 -6290688 - G3_DM LINE Jockey -4512 93 1 6 613 31 26 0 0 chrU 3758610 3758648 -6290389 + AT_rich Low_complexity Low_complexity 1 38 0 6 613 656 97 0 0 chrU 3758786 3758879 -6290158 - G3_DM LINE Jockey -4512 93 1 6 613 29 28 0 0 chrU 3759141 3759177 -6289860 + AT_rich Low_complexity Low_complexity 1 36 0 6 613 3677 42 2 9 chrU 3759616 3760067 -6288970 - NINJA_I LTR Pao -996 5015 4568 6 613 10536 34 39 2 chrU 3760063 3763077 -6285960 - NINJA_I LTR Pao -1624 4387 890 6 613 17093 5 1 0 chrU 3763076 3764940 -6284097 + DMRT1B LINE R1 150 2014 -3169 6 613 5992 1 1 0 chrU 3770052 3770709 -6278328 - QUASIMODO_LTR LTR Gypsy 0 658 1 6 613 27 49 0 0 chrU 3770916 3770957 -6278080 + AT_rich Low_complexity Low_complexity 1 41 0 6 613 919 60 0 0 chrU 3771436 3771553 -6277484 - TRANSIB2 DNA Transib 0 2844 2728 6 613 521 107 0 12 chrU 3771548 3771633 -6277404 - TRANSIB2 DNA Transib -290 2554 2471 6 613 1254 60 0 0 chrU 3771649 3771917 -6277120 - TRANSIB2 DNA Transib -1334 1510 1190 6 613 1251 34 0 0 chrU 3771943 3772090 -6276947 - TRANSIB2 DNA Transib -1858 986 840 6 613 2715 46 217 2 chrU 3772088 3772513 -6276524 - TRANSIB2 DNA Transib -2327 517 1 6 613 24 0 0 0 chrU 3772570 3772594 -6276443 + AT_rich Low_complexity Low_complexity 1 24 0 6 613 23 68 0 0 chrU 3772794 3772838 -6276199 + AT_rich Low_complexity Low_complexity 1 44 0 6 613 22 88 0 0 chrU 3773121 3773178 -6275859 + AT_rich Low_complexity Low_complexity 1 57 0 6 613 1625 108 103 68 chrU 3773216 3773583 -6275454 + DM297_LTR LTR Gypsy 1 380 -34 6 613 3990 41 37 4 chrU 3773579 3774097 -6274940 + IDEFIX_LTR LTR Gypsy 60 594 0 6 613 25 0 0 0 chrU 3774264 3774289 -6274748 + AT_rich Low_complexity Low_complexity 1 25 0 6 613 4399 28 0 0 chrU 3774650 3775178 -6273859 + IDEFIX_I LTR Gypsy 1 528 -5100 6 613 26 0 0 0 chrU 3776310 3776336 -6272701 + AT_rich Low_complexity Low_complexity 1 26 0 6 613 2320 11 15 0 chrU 3776383 3776651 -6272386 + QUASIMODO_LTR LTR Gypsy 1 272 -386 6 613 2466 7 0 7 chrU 3776898 3777178 -6271859 + QUASIMODO_LTR LTR Gypsy 381 658 0 6 613 2058 25 0 4 chrU 3777178 3777420 -6271617 + QUASIMODO_I LTR Gypsy 1 241 -5819 6 613 2403 36 36 0 chrU 3777431 3777737 -6271300 + QUASIMODO_I LTR Gypsy 1076 1392 -4668 6 613 6053 32 28 2 chrU 3780150 3781420 -6267617 + QUASIMODO_I LTR Gypsy 4641 5986 -74 6 613 3187 13 0 0 chrU 3781416 3781791 -6267246 + QUASIMODO_LTR LTR Gypsy 153 527 -131 6 613 2625 289 57 18 chrU 3782009 3783352 -6265685 - QUASIMODO_I LTR Gypsy 0 6060 4666 6 613 511 277 39 8 chrU 3783361 3783890 -6265147 - QUASIMODO_I LTR Gypsy -2124 3839 3293 6 613 4244 259 31 10 chrU 3783895 3785237 -6263800 - IDEFIX_I LTR Gypsy -2828 2800 1432 6 613 576 284 24 28 chrU 3785706 3785956 -6263081 - QUASIMODO_I LTR Gypsy -4523 1537 1289 6 613 807 316 37 25 chrU 3785957 3786470 -6262567 - QUASIMODO_I LTR Gypsy -5163 897 379 6 613 1932 140 39 34 chrU 3786680 3787201 -6261836 + QUASIMODO_LTR LTR Gypsy 1 658 0 6 613 253 100 0 0 chrU 3787201 3787241 -6261796 - BARI1 DNA Tc1 -1708 42 3 6 613 4314 37 8 36 chrU 3787209 3787820 -6261217 + IDEFIX_LTR LTR Gypsy 1 594 0 6 613 25 0 0 0 chrU 3788010 3788035 -6261002 + AT_rich Low_complexity Low_complexity 1 25 0 6 613 3154 169 45 41 chrU 3788320 3789392 -6259645 + IDEFIX_I LTR Gypsy 1 1070 -4558 6 613 4359 37 13 0 chrU 3789392 3789939 -6259098 + IDEFIX_I LTR Gypsy 1181 1734 -3894 6 613 3685 38 66 4 chrU 3789938 3790782 -6258255 + IDEFIX_I LTR Gypsy 2111 3007 -2621 6 613 2648 101 19 46 chrU 3790882 3792496 -6256541 - DMSAT6 Satellite Satellite -238 1571 1 6 613 2820 91 20 24 chrU 3792529 3794986 -6254051 - DMSAT6 Satellite Satellite -3 2446 1 6 613 2813 99 15 14 chrU 3795006 3797079 -6251958 - DMSAT6 Satellite Satellite -3 2074 1 6 76 2834 97 19 31 chrU 3797099 3806299 -6242738 - DMSAT6 Satellite Satellite -3 9084 1 6 614 2805 102 27 27 chrU 3806400 3808631 -6240406 + DMSAT6 Satellite Satellite 1 2231 -267 6 614 2716 104 16 26 chrU 3808658 3811712 -6237325 + DMSAT6 Satellite Satellite 1 3023 0 6 614 2598 124 24 2 chrU 3811740 3812200 -6236837 + DMSAT6 Satellite Satellite 1 470 0 6 614 2914 107 19 17 chrU 3817935 3821776 -6227261 + DMSAT6 Satellite Satellite 1 3847 -85 6 614 1103 138 11 5 chrU 3822502 3822692 -6226345 + DNAREP1_DM LINE Penelope 46 236 -358 6 614 293 0 0 26 chrU 3822743 3822781 -6226256 + (TAA)n Simple_repeat Simple_repeat 2 38 0 6 614 1104 27 7 7 chrU 3834134 3834282 -6214755 - IDEFIX_LTR LTR Gypsy 0 594 447 6 614 533 31 0 0 chrU 3834281 3834345 -6214692 - IDEFIX_LTR LTR Gypsy -530 64 1 6 614 13080 101 66 2 chrU 3834345 3837232 -6211805 - IDEFIX_I LTR Gypsy 0 5628 2557 6 614 18750 33 6 2 chrU 3837333 3839552 -6209485 - STALKER4_I LTR Gypsy -738 5792 3564 6 614 7819 12 9 4 chrU 3839543 3840447 -6208590 - STALKER4_I LTR Gypsy -4314 2216 1309 6 614 1957 190 25 22 chrU 3840449 3840895 -6208142 - Stalker2_I LTR Gypsy -6665 737 291 6 614 28 48 0 0 chrU 3840902 3840944 -6208093 + AT_rich Low_complexity Low_complexity 1 42 0 6 614 574 138 25 16 chrU 3841061 3841166 -6207871 - STALKER4_LTR LTR Gypsy -23 379 249 6 614 9808 169 56 14 chrU 3848052 3851002 -6198035 - Gypsy5_I LTR Gypsy -3399 3110 38 6 614 1257 132 9 9 chrU 3851034 3851248 -6197789 - Gypsy5_I LTR Gypsy -1459 5050 4837 6 614 4982 160 36 1 chrU 3851348 3852618 -6196419 - Gypsy5_I LTR Gypsy -1830 4679 3365 6 614 2724 115 10 36 chrU 3852718 3853864 -6195173 - DMSAT6 Satellite Satellite -113 1115 1 6 614 2777 97 47 14 chrU 3853875 3854785 -6194252 - DMSAT6 Satellite Satellite -28 940 1 6 614 2680 109 21 27 chrU 3860843 3862980 -6186057 - DMSAT6 Satellite Satellite -28 2125 1 6 614 2759 100 14 35 chrU 3863001 3867868 -6181169 - DMSAT6 Satellite Satellite 0 4769 1 6 614 8608 78 1 17 chrU 3867971 3869470 -6179567 + DOC LINE Jockey 3310 4740 0 6 614 1815 141 37 12 chrU 3869506 3869829 -6179208 + Invader1_LTR LTR Gypsy 93 423 0 6 614 514 321 173 36 chrU 3869968 3870767 -6178270 + MICROPIA_I LTR Gypsy 772 1679 -2797 6 614 8436 35 2 1 chrU 3870770 3871756 -6177281 - DMCR1A LINE CR1 0 4470 3484 6 614 2133 28 0 0 chrU 3871750 3871997 -6177040 - DMCR1A LINE CR1 -1628 2842 2596 6 614 6337 18 33 0 chrU 3872549 3873276 -6175761 - DMCR1A LINE CR1 -2328 2142 1392 6 614 7387 59 39 9 chrU 3878396 3879370 -6169667 - Gypsy7_I LTR Gypsy -1293 3691 2689 6 614 1845 50 4 28 chrU 3879392 3879639 -6169398 + BATUMI_LTR LTR Pao 32 272 0 6 614 24647 36 10 62 chrU 3879639 3883036 -6166001 + BATUMI_I LTR Pao 1 3221 -4742 6 614 4558 2 0 2 chrU 3883136 3883634 -6165403 - FW_DM LINE Jockey -4195 497 1 6 614 3447 53 0 27 chrU 3883676 3884125 -6164912 - PROTOP_A DNA P -668 437 1 6 614 917 228 91 13 chrU 3884125 3884356 -6164681 - TOM_I LTR Gypsy -2137 3975 3727 6 614 3247 217 61 13 chrU 3884430 3885255 -6163782 - TOM_I LTR Gypsy -3053 3059 2196 6 614 787 287 139 65 chrU 3885966 3887261 -6161776 + TV1I LTR Gypsy 379 1730 -4330 6 614 2657 245 18 15 chrU 3887512 3888192 -6160845 + IDEFIX_I LTR Gypsy 1432 2113 -3515 6 614 4746 250 25 24 chrU 3888186 3889720 -6159317 + TV1I LTR Gypsy 2571 4106 -1857 6 614 2726 29 6 0 chrU 3889727 3890042 -6158995 + DMCR1A LINE CR1 3275 3591 -879 6 614 3503 25 0 2 chrU 3890063 3890463 -6158574 + DMCR1A LINE CR1 3711 4109 -361 6 614 448 35 0 0 chrU 3890460 3890518 -6158519 + DMCR1A LINE CR1 4413 4470 0 6 614 323 240 10 10 chrU 3890530 3890631 -6158406 + TV1I LTR Gypsy 4117 4217 -1746 6 614 1400 293 39 6 chrU 3890630 3891293 -6157744 + QUASIMODO_I LTR Gypsy 5376 6060 0 6 614 1189 41 0 0 chrU 3891380 3891526 -6157511 + DMRT1A LINE R1 607 752 -4431 6 614 31357 53 10 2 chrU 3891530 3895623 -6153414 + DMRT1A LINE R1 1011 5183 0 6 614 24 0 0 0 chrU 3896159 3896183 -6152854 + AT_rich Low_complexity Low_complexity 1 24 0 6 614 25 0 0 0 chrU 3896494 3896519 -6152518 + AT_rich Low_complexity Low_complexity 1 25 0 6 614 3509 34 5 0 chrU 3897334 3897749 -6151288 + PROTOP_A DNA P 1 417 -688 6 614 3027 15 3 0 chrU 3897752 3898092 -6150945 - PROTOP_A DNA P 0 1105 765 6 614 9893 126 65 1 chrU 3898192 3899153 -6149884 - DM176_I LTR Gypsy -4948 1472 465 6 614 181 30 29 57 chrU 3899153 3899188 -6149849 + (TTA)n Simple_repeat Simple_repeat 3 36 0 6 614 9893 126 65 1 chrU 3899188 3899610 -6149427 - DM176_I LTR Gypsy -5956 464 1 6 614 2156 20 16 0 chrU 3899610 3899863 -6149174 - DM176_LTR LTR Gypsy 0 507 251 6 614 2344 11 0 78 chrU 3899864 3900171 -6148866 - DM176_LTR LTR Gypsy -224 283 1 6 614 940 86 14 48 chrU 3900171 3900298 -6148739 + STALKER4_LTR LTR Gypsy 258 379 -23 6 614 25 0 0 0 chrU 3900418 3900443 -6148594 + AT_rich Low_complexity Low_complexity 1 25 0 6 614 11150 75 38 21 chrU 3900467 3902243 -6146794 + STALKER4_I LTR Gypsy 291 2147 -4383 6 614 1418 27 11 0 chrU 3907336 3907522 -6141515 + STALKER4_I LTR Gypsy 6343 6530 0 6 614 3198 35 5 3 chrU 3907522 3907900 -6141137 + STALKER4_LTR LTR Gypsy 1 379 -23 6 614 2487 66 24 190 chrU 3907942 3908447 -6140590 - CIRCE LINE Composite -4963 1393 973 6 614 7921 39 9 28 chrU 3908579 3909568 -6139469 - CIRCE LINE Composite -5386 970 1 6 614 8810 19 50 74 chrU 3909574 3910741 -6138296 - CIRCE LINE Composite -6 6350 5212 6 614 2557 103 4 42 chrU 3910760 3913052 -6135985 + DMSAT6 Satellite Satellite 1 2206 0 6 614 6682 17 0 12 chrU 3913157 3913922 -6135115 + BATUMI_I LTR Pao 5665 6420 -1543 6 614 4715 18 19 11 chrU 3913948 3914518 -6134519 - BATUMI_I LTR Pao -962 7001 6427 6 614 4895 62 23 5 chrU 3914541 3915190 -6133847 + BATUMI_I LTR Pao 7303 7963 0 6 614 1665 74 10 79 chrU 3915190 3915482 -6133555 + BATUMI_LTR LTR Pao 1 272 0 6 614 22697 530 39 40 chrU 3915482 3923453 -6125584 + BATUMI_I LTR Pao 1 7963 0 6 614 1537 81 50 69 chrU 3923453 3923730 -6125307 + BATUMI_LTR LTR Pao 1 272 0 6 614 22 56 0 0 chrU 3923924 3923960 -6125077 + AT_rich Low_complexity Low_complexity 1 36 0 6 614 768 53 0 0 chrU 3925338 3925433 -6123604 - SSU-rRNA_Dme rRNA rRNA 0 1995 1901 6 614 1050 43 0 21 chrU 3925762 3925904 -6123133 - NTS_DM Other Other -77 163 25 6 614 266 196 0 19 chrU 3925977 3926029 -6123008 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 6 614 311 114 0 0 chrU 3926091 3926135 -6122902 + G2_DM LINE Jockey 2 45 -4301 6 614 5944 155 14 7 chrU 3926329 3927971 -6121066 + G2_DM LINE Jockey 4 2000 -2346 6 614 371 58 19 0 chrU 3927965 3928017 -6121020 + G_DM LINE Jockey 3 55 -4291 6 614 15487 70 56 59 chrU 3928119 3930623 -6118414 - BATUMI_I LTR Pao -5467 2496 1 6 614 2278 25 3 34 chrU 3930623 3930916 -6118121 - BATUMI_I LTR Pao -679 7284 7001 6 76 20741 27 37 0 chrU 3930911 3933315 -6115722 - DIVER_I LTR Pao -1864 3779 1287 6 615 759 290 0 14 chrU 3933754 3933971 -6115066 - TIRANT_I LTR Gypsy 0 7692 7479 6 615 2747 306 44 33 chrU 3937711 3939609 -6109428 - TIRANT_I LTR Gypsy -4255 3235 1313 6 615 250 263 13 13 chrU 3940596 3940673 -6108364 + (TATG)n Simple_repeat Simple_repeat 1 77 0 6 615 326 101 26 115 chrU 3941356 3941434 -6107603 - TIRANT_I LTR Gypsy -7621 71 1 6 615 5406 40 45 0 chrU 3941856 3942506 -6106531 - DIVER_I LTR Pao -4328 1315 637 6 615 3331 43 8 0 chrU 3942503 3942902 -6106135 - DIVER_I LTR Pao -5228 415 14 6 615 40 0 0 0 chrU 3943563 3943603 -6105434 + AT_rich Low_complexity Low_complexity 1 40 0 6 615 1897 306 105 61 chrU 3943916 3945127 -6103910 + IDEFIX_I LTR Gypsy 1 1355 -4273 6 615 5386 131 88 12 chrU 3945124 3946037 -6103000 + IDEFIX_I LTR Gypsy 1666 2647 -2981 6 615 778 128 230 34 chrU 3946034 3946273 -6102764 + IDEFIX_I LTR Gypsy 2764 3049 -2579 6 615 3355 53 1 14 chrU 3946273 3946712 -6102325 + STALKER4_LTR LTR Gypsy 1 399 -3 6 615 28 48 0 0 chrU 3946818 3946860 -6102177 + AT_rich Low_complexity Low_complexity 1 42 0 6 615 5249 5 8 8 chrU 3951962 3952619 -6096418 + STALKER4_I LTR Gypsy 5874 6530 0 6 615 3295 53 1 21 chrU 3952619 3953061 -6095976 + STALKER4_LTR LTR Gypsy 1 399 -3 6 615 5389 143 26 3 chrU 3953061 3953960 -6095077 + IDEFIX_I LTR Gypsy 3046 3964 -1664 6 615 3232 148 31 19 chrU 3953964 3954550 -6094487 + IDEFIX_I LTR Gypsy 4195 4787 -841 6 615 702 60 0 0 chrU 3954567 3954667 -6094370 + (TAA)n Simple_repeat Simple_repeat 3 102 0 6 615 919 170 4 11 chrU 3954796 3955034 -6094003 + IDEFIX_I LTR Gypsy 141 467 -5161 6 615 39 22 0 0 chrU 3955078 3955124 -6093913 + AT_rich Low_complexity Low_complexity 1 46 0 6 615 2740 126 72 117 chrU 3955699 3956411 -6092626 + MDG1_I LTR Gypsy 99 778 -5818 6 615 3922 2 2 0 chrU 3956416 3956838 -6092199 - Invader1_LTR LTR Gypsy 0 423 1 6 615 7125 6 21 2 chrU 3956838 3957644 -6091393 - Invader1_I LTR Gypsy 0 3186 2366 6 615 33 43 0 0 chrU 3957863 3957910 -6091127 + AT_rich Low_complexity Low_complexity 1 47 0 6 615 33 25 0 0 chrU 3957931 3957971 -6091066 + AT_rich Low_complexity Low_complexity 1 40 0 6 615 1142 148 64 5 chrU 3959307 3959510 -6089527 + DNAREP1_DM LINE Penelope 22 236 -358 6 615 21 57 0 0 chrU 3959551 3959586 -6089451 + AT_rich Low_complexity Low_complexity 1 35 0 6 615 302 237 0 26 chrU 3960428 3960506 -6088531 - BS2 LINE Jockey -498 4223 4148 6 615 22 0 0 0 chrU 3960780 3960802 -6088235 + AT_rich Low_complexity Low_complexity 1 22 0 6 615 1970 14 36 0 chrU 3968668 3968891 -6080146 - PROTOP DNA P -4249 231 1 6 615 415 138 10 41 chrU 3968891 3968987 -6080050 + ACCORD2_I LTR Gypsy 1874 1966 -5246 6 615 1153 42 7 0 chrU 3971005 3971148 -6077889 - DIVER2_LTR LTR Pao 0 385 242 6 615 993 27 0 0 chrU 3971161 3971272 -6077765 - DIVER2_LTR LTR Pao -274 111 1 6 615 3494 52 9 0 chrU 3971272 3971697 -6077340 - DIVER2_I LTR Pao 0 4147 3719 6 615 976 37 0 145 chrU 3971674 3971833 -6077204 - DIVER2_I LTR Pao -2572 1575 1440 6 615 1666 50 0 0 chrU 3971833 3972033 -6077004 - DIVER2_I LTR Pao -3048 1099 900 6 615 2619 95 4 48 chrU 3972483 3975618 -6073419 - DMSAT6 Satellite Satellite 0 2998 1 6 615 2636 96 4 52 chrU 3975657 3977969 -6071068 - DMSAT6 Satellite Satellite 0 2201 1 6 615 2715 97 11 36 chrU 3982045 3986963 -6062074 - DMSAT6 Satellite Satellite -26 4794 1 6 615 12536 50 78 17 chrU 3987075 3988809 -6060228 + TRANSIB2 DNA Transib 382 2220 -624 6 615 3597 86 63 7 chrU 3989152 3989706 -6059331 + TRANSIB2 DNA Transib 1810 2779 -65 6 615 4909 111 0 0 chrU 3989707 3990385 -6058652 - DMRT1B LINE R1 -1372 3811 3134 6 615 556 279 67 0 chrU 3990416 3990581 -6058456 + Gypsy12_I LTR Gypsy 3154 3329 -2217 6 615 499 100 59 23 chrU 3991179 3991330 -6057707 - DMCR1A LINE CR1 -4119 351 89 6 615 6049 0 0 0 chrU 3998678 3999325 -6049712 - DOC LINE Jockey -4077 648 2 6 615 296 200 69 23 chrU 3999596 3999683 -6049354 - TABOR_LTR LTR Gypsy -415 91 1 6 615 421 55 28 0 chrU 3999674 3999746 -6049291 - MDG1_I LTR Gypsy 0 6596 6543 6 615 1918 63 0 4 chrU 3999746 4000000 -6049037 - IDEFIX_LTR LTR Gypsy 0 594 342 6 615 2227 37 137 0 chrU 4000000 4000300 -6048737 - IDEFIX_LTR LTR Gypsy -253 341 1 6 615 275 100 0 0 chrU 4000268 4000308 -6048729 + BARI1 DNA Tc1 3 42 -1708 6 615 378 313 6 30 chrU 4000537 4000705 -6048332 - GTWIN_I LTR Gypsy -1795 4712 4549 6 615 979 297 81 11 chrU 4000702 4001170 -6047867 - GTWIN_I LTR Gypsy -2070 4437 3942 6 615 367 304 40 0 chrU 4001336 4001484 -6047553 - Gypsy_DS LTR Gypsy -3429 4093 3940 6 615 9705 62 27 2 chrU 4001588 4002872 -6046165 + DM412 LTR Gypsy 5167 6483 -414 6 615 2844 60 3 0 chrU 4011704 4012074 -6036963 + DM412 LTR Gypsy 3727 4097 -2800 6 615 2944 31 31 3 chrU 4012077 4012430 -6036607 + DM412 LTR Gypsy 4439 4801 -2096 6 615 5907 49 12 0 chrU 4012428 4013160 -6035877 + DM412 LTR Gypsy 5136 5876 -1021 6 615 1720 124 74 0 chrU 4013164 4013447 -6035590 + MAX_LTR LTR Pao 18 321 0 6 615 432 99 0 112 chrU 4013447 4013527 -6035510 + MAX_I LTR Pao 1 71 -7843 6 615 654 83 0 0 chrU 4013531 4013615 -6035422 + MAX_I LTR Pao 213 296 -7618 6 615 17400 2 1 0 chrU 4015849 4017758 -6031279 + TART_B1 LINE telomeric 2288 4197 -6457 6 615 44659 101 15 22 chrU 4022445 4029158 -6019879 + TART_B1 LINE telomeric 1822 8485 -2169 6 615 7286 6 0 5 chrU 4029160 4029971 -6019066 + TART LINE telomeric 11056 11862 -2615 6 615 1024 149 68 114 chrU 4044359 4044639 -6004398 - ROVER-LTR_DM LTR Gypsy -31 336 70 6 615 1279 221 51 51 chrU 4044698 4045132 -6003905 - Gypsy_LTR LTR Gypsy -20 462 29 6 615 6015 192 45 1 chrU 4045176 4046469 -6002568 - Gypsy_I LTR Gypsy -906 6616 5093 6 615 366 281 24 24 chrU 4048093 4048217 -6000820 + BS2 LINE Jockey 1288 1411 -3310 6 615 5323 110 21 10 chrU 4048301 4049109 -5999928 + BS2 LINE Jockey 1540 2356 -2365 6 615 12319 53 39 1 chrU 4049414 4050955 -5998082 + BS2 LINE Jockey 2372 3971 -750 6 615 2317 96 64 20 chrU 4050954 4051501 -5997536 - HELENA_RT LINE Jockey 0 1317 936 6 615 25 0 0 0 chrU 4051683 4051708 -5997329 + AT_rich Low_complexity Low_complexity 1 25 0 6 615 23 68 0 0 chrU 4051810 4051854 -5997183 + AT_rich Low_complexity Low_complexity 1 44 0 6 615 23 33 0 0 chrU 4052536 4052566 -5996471 + AT_rich Low_complexity Low_complexity 1 30 0 6 615 2637 134 122 56 chrU 4052861 4053416 -5995621 + DNAREP1_DM LINE Penelope 1 592 -2 6 615 23 68 0 0 chrU 4053663 4053707 -5995330 + AT_rich Low_complexity Low_complexity 1 44 0 6 615 730 218 29 17 chrU 4053882 4054285 -5994752 - DNAREP1_DM LINE Penelope -262 332 91 6 615 244 115 16 0 chrU 4054299 4054360 -5994677 - IDEFIX_LTR LTR Gypsy 0 594 533 6 615 3511 100 4 13 chrU 4054338 4054941 -5994096 - HELENA_RT LINE Jockey 0 1317 909 6 615 3293 47 2 5 chrU 4054972 4055381 -5993656 - IDEFIX_LTR LTR Gypsy 0 594 187 6 615 1290 224 53 44 chrU 4055407 4055837 -5993200 + Gypsy_LTR LTR Gypsy 29 462 -20 6 615 449 234 92 75 chrU 4055928 4056168 -5992869 + Gypsy_I LTR Gypsy 63 306 -6201 6 615 13850 63 12 2 chrU 4056153 4058376 -5990661 - BS2 LINE Jockey 0 4721 2370 6 615 332 301 31 31 chrU 4058476 4058637 -5990400 - MDG3_I LTR Gypsy -1563 3423 3263 6 615 364 304 54 54 chrU 4058796 4059125 -5989912 - Invader3_I LTR Gypsy -2302 2586 2178 6 615 506 33 0 0 chrU 4061360 4061421 -5987616 + HELENA_RT LINE Jockey 1156 1216 -101 6 615 1907 79 15 4 chrU 4061430 4061696 -5987341 - BS2 LINE Jockey 0 4721 4453 6 615 3432 8 0 3 chrU 4061693 4062080 -5986957 - ACCORD2_I LTR Gypsy -1079 6133 5748 6 616 5569 92 64 5 chrU 4067542 4068402 -5980635 - BS2 LINE Jockey -2220 2501 1591 6 616 2162 222 23 16 chrU 4068890 4069466 -5979571 + DM297_I LTR Gypsy 3508 4087 -2080 6 616 427 236 85 58 chrU 4069479 4069714 -5979323 - Gypsy_LTR LTR Gypsy -20 462 235 6 616 268 148 36 36 chrU 4070780 4070836 -5978201 + MDG3_I LTR Gypsy 1281 1336 -3650 6 616 180 0 0 0 chrU 4071090 4071110 -5977927 + (TAAAAA)n Simple_repeat Simple_repeat 3 22 0 6 616 527 317 12 4 chrU 4071221 4071465 -5977572 + Invader2_I LTR Gypsy 1854 2099 -2493 6 616 29 28 0 0 chrU 4071604 4071640 -5977397 + AT_rich Low_complexity Low_complexity 1 36 0 6 616 406 284 348 0 chrU 4071720 4071930 -5977107 + MDG3_I LTR Gypsy 3885 4167 -819 6 616 408 287 61 45 chrU 4071942 4072321 -5976716 + Invader2_I LTR Gypsy 4148 4532 -60 6 616 203 116 47 0 chrU 4072422 4072465 -5976572 + (TAG)n Simple_repeat Simple_repeat 3 47 0 6 616 25183 30 0 2 chrU 4072604 4075551 -5973486 + G2_DM LINE Jockey 53 2993 -109 6 616 4441 41 2 2 chrU 4081349 4081886 -5967151 - R1_DM LINE R1 -4043 1313 777 6 616 3777 55 55 4 chrU 4081885 4082378 -5966659 - R1_DM LINE R1 -4838 518 1 6 616 462 55 0 0 chrU 4082378 4082433 -5966604 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 6 616 27741 22 28 1 chrU 4082431 4085632 -5963405 - R2_DM LINE R2 0 3607 318 6 616 1484 12 0 0 chrU 4085630 4085793 -5963244 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2419 6 616 6633 15 21 1 chrU 4085792 4086544 -5962493 - SSU-rRNA_Dme rRNA rRNA -932 1063 297 6 616 1230 94 5 32 chrU 4086644 4086864 -5962173 - DM297_I LTR Gypsy -317 5850 5637 6 616 26 0 0 0 chrU 4086885 4086911 -5962126 + AT_rich Low_complexity Low_complexity 1 26 0 6 616 1831 103 15 0 chrU 4086911 4087174 -5961863 - BS2 LINE Jockey 0 4721 4455 6 616 818 101 51 56 chrU 4087168 4087346 -5961691 - DM297_I LTR Gypsy -545 5622 5446 6 616 1571 89 161 14 chrU 4087333 4087780 -5961257 - DM297_I LTR Gypsy -836 5331 4720 6 616 700 98 36 0 chrU 4087774 4087886 -5961151 - DM297_I LTR Gypsy -2277 3890 3775 6 616 637 204 62 103 chrU 4087899 4088123 -5960914 - ACCORD2_LTR LTR Gypsy 0 215 1 6 616 2682 99 32 2 chrU 4088128 4088521 -5960516 - ACCORD2_I LTR Gypsy -16 7196 6792 6 616 3562 5 47 0 chrU 4088521 4088925 -5960112 - Invader1_LTR LTR Gypsy 0 423 1 6 616 5879 62 87 13 chrU 4088925 4090130 -5958907 - ACCORD2_I LTR Gypsy -417 6795 5328 6 616 4512 36 0 0 chrU 4090120 4090652 -5958385 - ACCORD2_I LTR Gypsy -2056 5156 4625 6 616 6185 47 3 0 chrU 4090644 4091394 -5957643 - ACCORD2_I LTR Gypsy -2521 4691 3940 6 616 6014 59 5 0 chrU 4091398 4092140 -5956897 - DMCR1A LINE CR1 0 4470 3725 6 616 365 285 34 54 chrU 4095168 4095372 -5953665 + Invader6_I LTR Gypsy 3469 3611 -488 6 616 1820 98 55 0 chrU 4095714 4095988 -5953049 + Invader1_I LTR Gypsy 2718 3006 -180 6 616 2604 109 88 5 chrU 4096371 4096804 -5952233 + Invader1_I LTR Gypsy 2718 3186 0 6 616 269 80 0 167 chrU 4096804 4096864 -5952173 + Invader1_LTR LTR Gypsy 1 50 -373 6 616 1322 137 26 22 chrU 4096862 4097094 -5951943 + Invader1_LTR LTR Gypsy 191 423 0 6 616 1239 113 239 55 chrU 4097094 4097360 -5951677 - ACCORD2_I LTR Gypsy -6896 316 1 6 616 779 188 45 98 chrU 4097360 4097584 -5951453 - ACCORD2_LTR LTR Gypsy 0 215 4 6 616 4740 69 171 3 chrU 4097587 4098629 -5950408 - DM297_I LTR Gypsy -2448 3719 2439 6 616 332 39 0 19 chrU 4098622 4098674 -5950363 - DM297_I LTR Gypsy -4186 1981 1931 6 616 987 69 76 0 chrU 4098674 4098819 -5950218 - DM297_I LTR Gypsy -4157 2010 1855 6 616 5671 104 15 7 chrU 4098818 4099708 -5949329 - DM297_I LTR Gypsy -4557 1610 714 6 616 1072 144 46 166 chrU 4099808 4100199 -5948838 - DM297_LTR LTR Gypsy 0 414 71 6 616 2467 98 8 5 chrU 4100209 4100579 -5948458 - DM297_I LTR Gypsy -2 6165 5795 6 616 1053 39 25 25 chrU 4100679 4100839 -5948198 + NTS_DM Other Other 81 240 0 6 616 1751 30 21 21 chrU 4100839 4101079 -5947958 + NTS_DM Other Other 1 240 0 6 616 1847 25 17 17 chrU 4101079 4101319 -5947718 + NTS_DM Other Other 1 240 0 6 616 836 39 0 10 chrU 4101319 4101422 -5947615 + NTS_DM Other Other 1 102 -138 6 616 2629 10 0 0 chrU 4101425 4101724 -5947313 - G6_DM LINE Jockey 0 2042 1744 6 616 1647 32 18 18 chrU 4101734 4101956 -5947081 + NTS_DM Other Other 19 240 0 6 616 1874 21 17 17 chrU 4101956 4102196 -5946841 + NTS_DM Other Other 1 240 0 6 616 1801 34 17 17 chrU 4102196 4102436 -5946601 + NTS_DM Other Other 1 240 0 6 616 1849 25 17 17 chrU 4102436 4102676 -5946361 + NTS_DM Other Other 1 240 0 6 616 866 39 0 0 chrU 4102676 4102778 -5946259 + NTS_DM Other Other 1 102 -138 6 616 2656 105 10 11 chrU 4102774 4103293 -5945744 - G6_DM LINE Jockey 0 2042 1739 6 616 591 362 21 16 chrU 4111476 4111849 -5937188 + MICROPIA_I LTR Gypsy 273 647 -3829 6 616 864 318 5 5 chrU 4111886 4112253 -5936784 + MICROPIA_I LTR Gypsy 1349 1715 -2761 6 616 1304 282 37 16 chrU 4112270 4112815 -5936222 + MICROPIA_I LTR Gypsy 2239 2794 -1682 6 616 423 330 9 5 chrU 4112834 4113044 -5935993 + MICROPIA_I LTR Gypsy 3237 3447 -1029 6 616 3463 30 0 7 chrU 4113036 4113471 -5935566 + G2_DM LINE Jockey 1254 1685 -1417 6 616 3210 47 68 0 chrU 4113475 4113918 -5935119 + G2_DM LINE Jockey 1891 2363 -739 6 616 2551 69 21 31 chrU 4113923 4114310 -5934727 + G2_DM LINE Jockey 2523 2905 -197 6 616 1554 15 0 0 chrU 4114315 4114585 -5934452 + (TTATA)n Simple_repeat Simple_repeat 1 270 0 6 616 5095 10 5 0 chrU 4114723 4115332 -5933705 + QUASIMODO_LTR LTR Gypsy 1 612 -46 6 616 3757 19 0 45 chrU 4115320 4115814 -5933223 + QUASIMODO_I LTR Gypsy 152 623 -5437 6 616 3841 4 0 60 chrU 4115814 4116346 -5932691 - ROVER-I_DM LTR Gypsy -5483 1101 602 6 616 9704 16 6 0 chrU 4116366 4117555 -5931482 + QUASIMODO_I LTR Gypsy 443 1638 -4422 6 616 12369 124 24 8 chrU 4124835 4126694 -5922343 + QUASIMODO_I LTR Gypsy 3384 5272 -788 6 616 1151 19 32 0 chrU 4126667 4126824 -5922213 + QUASIMODO_I LTR Gypsy 5899 6060 0 6 616 4974 7 68 2 chrU 4126824 4127440 -5921597 + QUASIMODO_LTR LTR Gypsy 1 657 -1 6 616 579 192 41 23 chrU 4127446 4127617 -5921420 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 6 616 1868 103 50 28 chrU 4127621 4127980 -5921057 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 616 2156 173 73 9 chrU 4127980 4128539 -5920498 - ROVER-I_DM LTR Gypsy 0 6584 5990 6 616 21 57 0 0 chrU 4128696 4128731 -5920306 + AT_rich Low_complexity Low_complexity 1 35 0 6 616 35 41 0 0 chrU 4128818 4128867 -5920170 + AT_rich Low_complexity Low_complexity 1 49 0 6 616 326 240 63 8 chrU 4128946 4128965 -5920072 + P_DG DNA P 2740 2765 -123 6 616 787 150 244 0 chrU 4128965 4129211 -5919826 - DNAREP1_DM LINE Penelope -3 591 286 6 616 385 329 57 25 chrU 4129265 4129546 -5919491 - DM1731_I LTR Copia -67 3909 3620 6 616 381 317 73 6 chrU 4129817 4129982 -5919055 - DM1731_I LTR Copia -729 3247 3072 6 616 320 299 0 0 chrU 4130006 4130113 -5918924 - DM1731_I LTR Copia -1281 2695 2589 6 616 427 227 58 0 chrU 4130252 4130424 -5918613 + QUASIMODO_I LTR Gypsy 4418 4599 -1461 6 616 1159 276 7 9 chrU 4130448 4130897 -5918140 + QUASIMODO_I LTR Gypsy 4781 5228 -832 6 616 23 54 0 0 chrU 4130913 4130950 -5918087 + AT_rich Low_complexity Low_complexity 1 37 0 6 616 281 238 28 19 chrU 4131099 4131206 -5917831 + TV1I LTR Gypsy 5463 5570 -393 6 616 285 89 0 0 chrU 4131215 4131260 -5917777 + (TAA)n Simple_repeat Simple_repeat 1 45 0 6 616 341 194 0 0 chrU 4131401 4131468 -5917569 + QUASIMODO_LTR LTR Gypsy 230 296 -362 6 616 21 71 0 0 chrU 4131469 4131511 -5917526 + AT_rich Low_complexity Low_complexity 1 42 0 6 616 1928 16 4 39 chrU 4131533 4131791 -5917246 - ROVER-LTR_DM LTR Gypsy 0 367 119 6 616 434 36 0 0 chrU 4139865 4139920 -5909117 - DNAREP1_DM LINE Penelope -31 563 509 6 616 1586 142 86 86 chrU 4139946 4140330 -5908707 - MICROPIA_LTR LTR Gypsy 0 476 93 6 616 615 132 320 17 chrU 4140333 4140514 -5908523 - MICROPIA_I LTR Gypsy 0 4476 4241 6 616 927 210 104 39 chrU 4140566 4140903 -5908134 - Gypsy_LTR LTR Gypsy -46 436 78 6 616 598 115 79 9 chrU 4140955 4141069 -5907968 - MICROPIA_I LTR Gypsy -226 4250 4129 6 616 4446 99 71 20 chrU 4141082 4141845 -5907192 - MICROPIA_I LTR Gypsy -528 3948 3147 6 616 2278 72 169 8 chrU 4141843 4142485 -5906552 - DMCR1A LINE CR1 0 4470 3725 6 616 249 283 10 0 chrU 4142585 4142684 -5906353 + XDMR_DM Unknown Unknown 260 359 -1 6 616 2946 218 30 16 chrU 4142602 4144629 -5904408 - SAR_DM Satellite Satellite -354 2055 1 6 616 2985 62 14 14 chrU 4144633 4145067 -5903970 + STALKER4_LTR LTR Gypsy 1 399 -3 6 616 1868 177 15 6 chrU 4145066 4145720 -5903317 - SAR_DM Satellite Satellite -883 659 1 6 616 334 224 0 0 chrU 4145725 4145810 -5903227 + XDMR Unknown Unknown 259 343 -18 6 616 2706 205 22 22 chrU 4145737 4146516 -5902521 - SAR_DM Satellite Satellite -314 1158 380 6 616 3215 222 30 23 chrU 4153650 4156309 -5892728 - SAR_DM Satellite Satellite -634 2678 1 6 616 2526 93 13 21 chrU 4156415 4158729 -5890308 + DMSAT6 Satellite Satellite 1 2296 -281 6 616 2790 101 30 24 chrU 4164522 4170020 -5879017 + DMSAT6 Satellite Satellite 1 5527 -3 6 616 3105 82 7 4 chrU 4170121 4170585 -5878452 - S_DM DNA Tc1 -1271 465 1 6 616 834 72 24 8 chrU 4170644 4170770 -5878267 + STALKER4_I LTR Gypsy 758 885 -5645 6 616 5865 6 0 3 chrU 4179300 4179949 -5869088 + POGO DNA Pogo 309 955 -1166 6 616 5965 0 0 3 chrU 4179942 4180607 -5868430 + POGO DNA Pogo 1459 2121 0 6 616 1773 5 0 0 chrU 4180607 4180796 -5868241 + R1_DM LINE R1 5168 5356 0 6 616 1792 114 0 0 chrU 4180796 4181050 -5867987 + R1_DM LINE R1 1367 1620 -3736 6 616 6362 73 35 8 chrU 4181056 4181910 -5867127 + R1_DM LINE R1 1367 2243 -3113 6 616 5538 42 1 21 chrU 4182070 4182746 -5866291 + Baggins1 LINE LOA 4791 5453 0 6 616 3017 68 7 17 chrU 4183184 4183589 -5865448 + Baggins1 LINE LOA 4791 5191 -262 6 616 1099 336 20 6 chrU 4183848 4184339 -5864698 - Gypsy3_I LTR Gypsy -4648 1529 1032 6 616 24 0 0 0 chrU 4186369 4186393 -5862644 + AT_rich Low_complexity Low_complexity 1 24 0 6 616 2442 164 115 33 chrU 4187600 4187688 -5861349 - DNAREP1_DM LINE Penelope 0 594 505 6 616 190 56 27 27 chrU 4187688 4187725 -5861312 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 616 2442 164 115 33 chrU 4187725 4188185 -5860852 - DNAREP1_DM LINE Penelope -90 504 3 6 616 608 245 113 52 chrU 4188550 4188912 -5860125 - M4DM DNA Transib -1049 386 3 6 616 383 207 24 0 chrU 4188974 4189056 -5859981 + LINEJ1_DM LINE Jockey 3830 3913 -1107 6 616 1806 257 28 61 chrU 4190039 4190694 -5858343 + Gypsy12A_LTR LTR Gypsy 46 678 -1658 6 616 517 188 61 36 chrU 4190703 4190909 -5858128 + Gypsy12A_LTR LTR Gypsy 775 1049 -1287 6 616 9483 18 32 3 chrU 4190895 4191996 -5857041 + FW_DM LINE Jockey 3554 4686 -6 6 616 832 141 51 61 chrU 4191995 4192191 -5856846 + Gypsy12A_LTR LTR Gypsy 966 1159 -1121 6 616 1666 45 0 0 chrU 4192201 4192400 -5856637 + Baggins1 LINE LOA 1 199 -5254 6 616 1746 46 149 0 chrU 4192418 4192659 -5856378 + Baggins1 LINE LOA 2791 3067 -2386 6 616 9896 43 72 0 chrU 4192659 4193951 -5855086 + Baggins1 LINE LOA 3691 5076 -377 6 616 22 0 0 0 chrU 4194009 4194031 -5855006 + AT_rich Low_complexity Low_complexity 1 22 0 6 9 1888 124 27 7 chrU 4194044 4194345 -5854692 + Gypsy12A_LTR LTR Gypsy 1974 2280 0 6 617 3085 142 159 10 chrU 4194350 4195328 -5853709 - IDEFIX_I LTR Gypsy -1448 4180 3058 6 617 7269 8 0 0 chrU 4195337 4196134 -5852903 + FW_DM LINE Jockey 1 797 -3895 6 617 1591 95 19 0 chrU 4196134 4196398 -5852639 - S_DM DNA Tc1 0 1736 1468 6 617 813 76 0 0 chrU 4196382 4196500 -5852537 + S_DM DNA Tc1 1619 1736 0 6 617 6946 20 19 0 chrU 4196500 4197295 -5851742 + FW_DM LINE Jockey 796 1605 -3087 6 617 8054 19 52 1 chrU 4197395 4198469 -5850568 + R1_DM LINE R1 3272 4400 -956 6 617 6855 29 13 0 chrU 4208187 4208979 -5840058 + R1_DM LINE R1 4032 4833 -523 6 617 3219 19 0 0 chrU 4208979 4209345 -5839692 - Stalker3_LTR LTR Gypsy 0 372 7 6 617 330 76 88 6 chrU 4209352 4209433 -5839604 - STALKER4_I LTR Gypsy 0 6530 6491 6 617 189 0 0 0 chrU 4209449 4209470 -5839567 + (T)n Simple_repeat Simple_repeat 1 21 0 6 617 3838 255 5 5 chrU 4209797 4210906 -5838131 - DM412 LTR Gypsy -322 6575 5468 6 617 16818 47 11 8 chrU 4211037 4213138 -5835899 + ZAM_I LTR Gypsy 2747 4852 -2638 6 617 3991 44 0 0 chrU 4213139 4213658 -5835379 + ZAM_I LTR Gypsy 5360 5878 -1612 6 617 2526 65 119 16 chrU 4213654 4214083 -5834954 + ZAM_I LTR Gypsy 6483 7033 -457 6 617 31 68 0 0 chrU 4220473 4220532 -5828505 + AT_rich Low_complexity Low_complexity 1 59 0 6 617 30 54 0 39 chrU 4220756 4220833 -5828204 + AT_rich Low_complexity Low_complexity 1 74 0 6 617 261 314 43 43 chrU 4223639 4223802 -5825235 + ZAM_I LTR Gypsy 3535 3697 -3793 6 617 2755 95 31 8 chrU 4224581 4225619 -5823418 - DMSAT6 Satellite Satellite -7 1061 1 6 617 2612 110 13 17 chrU 4225636 4226108 -5822929 - DMSAT6 Satellite Satellite 0 470 1 6 617 2202 133 6 63 chrU 4226136 4226624 -5822413 - DMSAT6 Satellite Satellite 0 470 11 6 617 2573 99 16 50 chrU 4226650 4228718 -5820319 - DMSAT6 Satellite Satellite 0 1997 1 6 617 2722 107 12 44 chrU 4228735 4230463 -5818574 - DMSAT6 Satellite Satellite 0 1672 1 6 617 2649 113 13 35 chrU 4230480 4232647 -5816390 - DMSAT6 Satellite Satellite 0 2120 1 6 617 2705 118 16 29 chrU 4232664 4236176 -5812861 - DMSAT6 Satellite Satellite 0 3467 1 6 617 2282 116 26 31 chrU 4236190 4236892 -5812145 - DMSAT6 Satellite Satellite -3 697 1 6 617 9052 22 0 2 chrU 4236891 4237987 -5811050 - STALKER4_I LTR Gypsy -1758 4772 3679 6 617 20465 42 3 9 chrU 4238087 4240657 -5808380 - R1_DM LINE R1 -2800 2556 1 6 617 967 35 0 0 chrU 4240690 4240804 -5808233 - R1_DM LINE R1 0 5356 5243 6 617 5586 23 1 0 chrU 4240801 4241461 -5807576 - R1_DM LINE R1 -290 5066 4406 6 617 4527 25 2 2 chrU 4241475 4242023 -5807014 - R1_DM LINE R1 -1069 4287 3740 6 617 8211 23 26 0 chrU 4248157 4249142 -5799895 - R1_DM LINE R1 -2039 3317 2307 6 617 7760 43 23 12 chrU 4249393 4250403 -5798634 - R1_DM LINE R1 -4335 1021 1 6 617 8429 27 49 0 chrU 4250436 4251481 -5797556 - R1_DM LINE R1 0 5356 4261 6 617 2305 49 2 66 chrU 4251800 4252194 -5796843 - ROO_I LTR Pao -7110 1146 778 6 617 3967 29 4 2 chrU 4252195 4252676 -5796361 + Gypsy_LTR LTR Gypsy 1 482 0 6 617 3412 12 9 0 chrU 4252674 4253093 -5795944 + Gypsy_I LTR Gypsy 1 423 -6084 6 617 367 0 0 0 chrU 4253093 4253134 -5795903 + Gypsy_I LTR Gypsy 533 573 -5934 6 617 2806 50 75 2 chrU 4262807 4263206 -5785831 - ROO_LTR LTR Pao 0 428 1 6 617 5593 48 6 9 chrU 4263206 4263991 -5785046 - ROO_I LTR Pao 0 8256 7474 6 617 1434 23 6 0 chrU 4263984 4264159 -5784878 - ROO_I LTR Pao -1000 7256 7081 6 617 2224 68 35 0 chrU 4264146 4264457 -5784580 - ROO_I LTR Pao -2505 5751 5430 6 617 3748 26 59 0 chrU 4264437 4264944 -5784093 - ROO_I LTR Pao -2970 5286 4750 6 617 350 120 23 57 chrU 4265056 4265144 -5783893 + QUASIMODO_LTR LTR Gypsy 1 85 -573 6 617 5353 38 44 0 chrU 4265138 4265933 -5783104 + DMRT1B LINE R1 1185 2014 -3169 6 617 3725 26 4 0 chrU 4265930 4266383 -5782654 + DMRT1B LINE R1 2188 2642 -2541 6 617 540 43 0 14 chrU 4266381 4266451 -5782586 + DMRT1B LINE R1 2800 2868 -2315 6 617 10227 27 264 21 chrU 4273251 4274798 -5774239 - MDG3_I LTR Gypsy -2539 2447 525 6 617 2479 7 0 0 chrU 4274801 4275086 -5773951 - MDG3_I LTR Gypsy -4701 285 1 6 617 1984 38 4 50 chrU 4275085 4275365 -5773672 - MDG3_LTR LTR Gypsy 0 267 1 6 617 850 224 0 0 chrU 4275365 4275544 -5773493 - Gypsy6_I LTR Gypsy -688 6324 6146 6 617 922 289 38 18 chrU 4275538 4276141 -5772896 - Gypsy6_I LTR Gypsy -1180 5832 5058 6 617 533 229 25 0 chrU 4276152 4276274 -5772763 - Gypsy3_I LTR Gypsy -2050 4127 4003 6 617 231 329 0 0 chrU 4276281 4276357 -5772680 - Gypsy2_I LTR Gypsy -5058 1077 1002 6 617 29 28 0 0 chrU 4277067 4277103 -5771934 + AT_rich Low_complexity Low_complexity 1 36 0 6 617 29 47 0 0 chrU 4277207 4277250 -5771787 + AT_rich Low_complexity Low_complexity 1 43 0 6 617 31 104 0 0 chrU 4277336 4277451 -5771586 + AT_rich Low_complexity Low_complexity 1 115 0 6 617 543 309 89 33 chrU 4277544 4278342 -5770695 - Gypsy5_I LTR Gypsy -1614 4895 4055 6 617 9200 35 3 0 chrU 4278461 4279597 -5769440 + MAX_I LTR Pao 2699 3838 -4076 6 617 5051 43 34 0 chrU 4279584 4280237 -5768800 + MAX_I LTR Pao 4028 4702 -3212 6 617 24 0 0 0 chrU 4289084 4289108 -5759929 + AT_rich Low_complexity Low_complexity 1 24 0 6 617 22 56 0 0 chrU 4291916 4291952 -5757085 + AT_rich Low_complexity Low_complexity 1 36 0 6 617 297 187 50 101 chrU 4291997 4292116 -5756921 + Copia_I LTR Copia 4401 4513 -80 6 617 2558 202 110 35 chrU 4292753 4293925 -5755112 - HETA LINE telomeric -388 5693 4803 6 617 22 56 0 0 chrU 4294077 4294113 -5754924 + AT_rich Low_complexity Low_complexity 1 36 0 6 617 292 202 34 76 chrU 4294158 4294276 -5754761 + Copia_I LTR Copia 4401 4513 -80 6 617 2783 172 82 25 chrU 4295029 4295901 -5753136 - TART LINE telomeric -4751 9726 8952 6 617 22 56 0 0 chrU 4296067 4296103 -5752934 + AT_rich Low_complexity Low_complexity 1 36 0 6 617 297 187 50 101 chrU 4296148 4296267 -5752770 + Copia_I LTR Copia 4401 4513 -80 6 617 2160 157 41 28 chrU 4303796 4304341 -5744696 - TART LINE telomeric -5038 9439 8952 6 617 356 191 75 9 chrU 4304575 4304681 -5744356 + Copia_I LTR Copia 4401 4513 -80 6 617 10267 21 13 5 chrU 4305170 4306436 -5742601 + SSU-rRNA_Dme rRNA rRNA 597 1873 -122 6 617 1006 38 23 0 chrU 4306431 4306562 -5742475 + LSU-rRNA_Dme rRNA rRNA 978 1111 -2789 6 617 331 64 0 0 chrU 4306555 4306602 -5742435 + LSU-rRNA_Dme rRNA rRNA 1575 1621 -2279 6 617 2444 52 260 2 chrU 4306598 4307048 -5741989 + LSU-rRNA_Dme rRNA rRNA 2013 2578 -1322 6 617 2278 52 10 0 chrU 4307046 4307337 -5741700 + R2_DM LINE R2 1649 1942 -1665 6 617 6491 112 77 0 chrU 4314230 4315286 -5733751 - DMRT1B LINE R1 -1268 3915 2779 6 617 1532 126 115 0 chrU 4315289 4315655 -5733382 - STALKER4_I LTR Gypsy -171 6359 5952 6 617 1139 113 20 0 chrU 4315653 4315848 -5733189 - STALKER4_I LTR Gypsy -1385 5145 4947 6 617 4169 72 17 3 chrU 4315835 4316416 -5732621 - STALKER4_I LTR Gypsy -1782 4748 4160 6 617 7123 48 44 0 chrU 4316411 4317357 -5731680 - R1_DM LINE R1 -1671 3685 2698 6 617 5623 41 232 12 chrU 4317362 4318400 -5730637 - R2_DM LINE R2 -1537 2070 805 6 617 7641 288 50 53 chrU 4318518 4322703 -5726334 - TIRANT_I LTR Gypsy -1901 5791 1621 6 618 912 138 0 30 chrU 4328296 4328461 -5720576 - GTWIN_LTR LTR Gypsy -335 160 1 6 618 11440 57 35 4 chrU 4328461 4331082 -5717955 - IDEFIX_I LTR Gypsy -1969 3659 957 6 618 3152 18 0 57 chrU 4331082 4331504 -5717533 - Gypsy3_LTR LTR Gypsy 0 398 1 6 618 723 74 0 0 chrU 4331504 4331612 -5717425 - IDEFIX_I LTR Gypsy -4670 958 851 6 618 1778 125 39 19 chrU 4331885 4332245 -5716792 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 618 2501 252 40 81 chrU 4332245 4333949 -5715088 + ROVER-I_DM LTR Gypsy 1 1635 -4949 6 618 3241 8 0 0 chrU 4333978 4334356 -5714681 + DOC LINE Jockey 31 408 -4317 6 618 16264 2 7 5 chrU 4340578 4342493 -5706544 + DOC LINE Jockey 31 1950 -2775 6 618 3713 44 4 16 chrU 4342486 4342990 -5706047 - BATUMI_I LTR Pao -5800 2163 1666 6 618 6951 49 16 108 chrU 4342991 4344292 -5704745 - BATUMI_I LTR Pao -6782 1181 1 6 618 1373 33 121 45 chrU 4344292 4344516 -5704521 - BATUMI_LTR LTR Pao 0 272 32 6 618 423 264 79 0 chrU 4344514 4344692 -5704345 + QUASIMODO_I LTR Gypsy 4836 5027 -1033 6 618 297 0 26 0 chrU 4344735 4344773 -5704264 + ROVER-LTR_DM LTR Gypsy 173 211 -156 6 618 733 335 48 43 chrU 4344874 4345393 -5703644 - Gypsy4_I LTR Gypsy -2923 3498 2864 6 618 1318 61 24 0 chrU 4345393 4345606 -5703431 - TLD2 Unknown Unknown 0 218 1 6 618 733 335 48 43 chrU 4345606 4346049 -5702988 - Gypsy4_I LTR Gypsy -2923 2863 2320 6 618 215 21 61 41 chrU 4346808 4346857 -5702180 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 6 618 334 345 31 42 chrU 4346958 4347354 -5701683 - Gypsy6_I LTR Gypsy -5228 1784 1344 6 618 279 258 32 61 chrU 4353633 4353872 -5695165 + TOM_I LTR Gypsy 4241 4423 -1689 6 618 1380 147 56 69 chrU 4353881 4354273 -5694764 + DNAREP1_DM LINE Penelope 1 332 -262 6 618 391 177 43 26 chrU 4354281 4354397 -5694640 + DOC4_DM LINE Jockey 328 445 -2346 6 618 450 268 0 21 chrU 4354380 4354525 -5694512 + DOC2_DM LINE Jockey 642 783 -4010 6 618 2003 51 0 0 chrU 4354517 4354774 -5694263 + DMCR1A LINE CR1 4214 4470 0 6 618 666 123 7 74 chrU 4354800 4354949 -5694088 + FW3_DM LINE Jockey 123 261 -2871 6 618 3264 91 164 8 chrU 4354987 4355645 -5693392 + FW3_DM LINE Jockey 366 1126 -2006 6 618 273 0 0 0 chrU 4355654 4355689 -5693348 + FW3_DM LINE Jockey 1659 1693 -1439 6 618 420 164 0 0 chrU 4355687 4355760 -5693277 + FW3_DM LINE Jockey 1815 1887 -1245 6 618 463 144 0 22 chrU 4355801 4355893 -5693144 - IDEFIX_I LTR Gypsy -745 4883 4794 6 618 260 98 0 0 chrU 4355894 4355935 -5693102 - IDEFIX_I LTR Gypsy -1099 4529 4489 6 618 5046 106 0 4 chrU 4355935 4356739 -5692298 - IDEFIX_I LTR Gypsy -1259 4369 3569 6 618 26 0 0 0 chrU 4356797 4356823 -5692214 + AT_rich Low_complexity Low_complexity 1 26 0 6 618 4619 30 3 2 chrU 4357013 4357606 -5691431 - IDEFIX_LTR LTR Gypsy 0 594 1 6 618 182 91 17 52 chrU 4357608 4357666 -5691371 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 6 618 4235 24 34 0 chrU 4357881 4358413 -5690624 - R1_DM LINE R1 -3446 1910 1361 6 618 946 23 0 0 chrU 4358416 4358545 -5690492 - DOC2_DM LINE Jockey 0 4793 4665 6 618 798 20 10 0 chrU 4358545 4358644 -5690393 - R1_DM LINE R1 -3661 1695 1596 6 618 2936 40 5 3 chrU 4358694 4359072 -5689965 - STALKER4_LTR LTR Gypsy -23 379 1 6 618 1733 87 84 35 chrU 4359072 4359443 -5689594 - STALKER4_I LTR Gypsy 0 6530 6142 6 618 9757 38 0 2 chrU 4359641 4360893 -5688144 - STALKER4_I LTR Gypsy -746 5784 4536 6 618 1208 69 6 6 chrU 4369542 4369718 -5679319 - R1_DM LINE R1 -4078 1278 1103 6 618 3166 72 5 4 chrU 4369718 4370261 -5678776 - R1_DM LINE R1 -4745 611 1 6 618 3692 11 0 0 chrU 4370294 4370729 -5678308 - R1_DM LINE R1 0 5356 4922 6 618 1551 167 97 58 chrU 4370829 4371332 -5677705 - TAHRE LINE telomeric -9921 542 20 6 618 766 142 88 0 chrU 4371348 4371496 -5677541 - TART LINE telomeric -3813 10664 10504 6 618 1616 204 71 22 chrU 4371485 4371936 -5677101 - TART LINE telomeric -4205 10272 9800 6 618 4842 32 0 0 chrU 4381247 4381840 -5667197 - MAX_I LTR Pao -1979 5935 5343 6 618 1809 5 0 18 chrU 4381840 4382059 -5666978 + ACCORD2_LTR LTR Gypsy 1 215 0 6 618 10549 17 21 23 chrU 4382059 4383429 -5665608 + ACCORD2_I LTR Gypsy 1 1367 -5845 6 618 715 36 164 62 chrU 4383510 4383656 -5665381 + ACCORD2_I LTR Gypsy 1507 1667 -5545 6 618 12733 105 47 12 chrU 4383756 4385774 -5663263 - Gypsy12_I LTR Gypsy -2517 3029 942 6 618 383 354 22 32 chrU 4386104 4386606 -5662431 + Copia2_I LTR Copia 140 636 -3526 6 618 769 326 152 14 chrU 4387296 4387919 -5661118 + Copia2_I LTR Copia 1383 2091 -2071 6 618 4022 12 4 2 chrU 4393184 4393699 -5655338 + Invader2_I LTR Gypsy 3871 4386 -206 6 618 1307 25 0 0 chrU 4394080 4394241 -5654796 + Invader2_LTR LTR Gypsy 106 266 0 6 618 1374 327 44 16 chrU 4394253 4395132 -5653905 + Copia2_I LTR Copia 3132 4035 -127 6 618 2187 94 200 39 chrU 4395388 4395853 -5653184 - Gypsy12_I LTR Gypsy -4595 951 412 6 618 4994 23 52 0 chrU 4395851 4396471 -5652566 + DMCR1A LINE CR1 969 1620 -2850 6 618 1697 152 105 163 chrU 4396571 4397381 -5651656 - MAX_I LTR Pao -6592 1322 560 6 618 72 0 0 0 chrU 4397397 4397469 -5651568 + AT_rich Low_complexity Low_complexity 1 72 0 6 618 2297 0 0 0 chrU 4397530 4397806 -5651231 + Copia_LTR LTR Copia 1 276 0 6 618 460 18 0 0 chrU 4397806 4397862 -5651175 + Copia_I LTR Copia 1 56 -4537 6 618 3802 18 0 0 chrU 4405794 4406251 -5642786 + DOC2_DM LINE Jockey 4337 4793 0 6 618 1416 301 11 11 chrU 4406597 4407171 -5641866 + Copia2_I LTR Copia 2595 3168 -994 6 618 496 319 34 21 chrU 4407191 4407482 -5641555 + Copia2_I LTR Copia 3255 3549 -613 6 618 337 272 0 0 chrU 4407497 4407622 -5641415 + Copia2_I LTR Copia 3941 4065 -97 6 618 249 184 66 0 chrU 4407986 4408062 -5640975 + QUASIMODO_I LTR Gypsy 5851 5931 -129 6 618 934 260 19 4 chrU 4409388 4409658 -5639379 + TOM_I LTR Gypsy 695 968 -5144 6 618 21 57 0 0 chrU 4409687 4409722 -5639315 + AT_rich Low_complexity Low_complexity 1 35 0 6 618 948 277 29 3 chrU 4409742 4410057 -5638980 + TOM_I LTR Gypsy 4540 4862 -1250 6 618 1633 256 62 0 chrU 4410049 4410597 -5638440 + TOM_I LTR Gypsy 5185 5766 -346 6 618 769 59 0 0 chrU 4410664 4410766 -5638271 - Copia2_LTR_DM LTR Copia 0 198 97 6 618 11453 31 19 1 chrU 4411368 4412833 -5636204 - Copia2_I LTR Copia -2399 1763 272 6 618 732 53 250 8 chrU 4412837 4412969 -5636068 - Copia2_I LTR Copia -3998 164 1 6 618 938 90 0 0 chrU 4412969 4413102 -5635935 - Copia2_LTR_DM LTR Copia 0 198 66 6 618 1738 21 4 21 chrU 4419435 4419676 -5629361 - NINJA_I LTR Pao -5774 237 1 6 618 2346 44 3 28 chrU 4419676 4420001 -5629036 - NINJA_LTR LTR Pao 0 317 1 6 618 1869 31 301 3 chrU 4420026 4420342 -5628695 + DMTOM1_LTR LTR Gypsy 1 410 0 6 618 2676 157 30 2 chrU 4420344 4421269 -5627768 + IDEFIX_I LTR Gypsy 4523 5501 -127 6 618 252 288 6 99 chrU 4421359 4421521 -5627516 + ACCORD2_I LTR Gypsy 526 672 -6540 6 618 278 216 76 76 chrU 4421628 4421733 -5627304 + MICROPIA_I LTR Gypsy 1 105 -4371 6 618 361 292 3 3 chrU 4421822 4422020 -5627017 + Invader5_I LTR Gypsy 234 431 -2755 6 618 4512 22 0 0 chrU 4422139 4422688 -5626349 + MAX_I LTR Pao 4759 5307 -2607 6 618 2171 46 3 14 chrU 4422671 4422957 -5626080 + MAX_I LTR Pao 5652 5934 -1980 6 618 3933 15 0 0 chrU 4422955 4423414 -5625623 + MAX_I LTR Pao 6290 6748 -1166 6 618 6405 26 89 46 chrU 4432379 4432501 -5616536 - ACCORD2_I LTR Gypsy -6236 976 857 6 618 208 0 30 30 chrU 4432501 4432534 -5616503 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 6 618 6405 26 89 46 chrU 4432534 4433006 -5616031 - ACCORD2_I LTR Gypsy -6356 856 345 6 618 183 42 0 0 chrU 4433006 4433030 -5616007 + (TATG)n Simple_repeat Simple_repeat 4 27 0 6 618 6405 26 89 46 chrU 4433030 4433370 -5615667 - ACCORD2_I LTR Gypsy -6868 344 1 6 618 1759 9 0 23 chrU 4433370 4433590 -5615447 - ACCORD2_LTR LTR Gypsy 0 215 1 6 618 1373 60 20 0 chrU 4433590 4433788 -5615249 + DIVER2_I LTR Pao 2798 2999 -1148 6 618 3176 187 40 79 chrU 4433788 4434767 -5614270 - Gypsy12_LTR LTR Gypsy 0 2336 1396 6 618 13466 23 16 1 chrU 4434871 4436537 -5612500 - R1_DM LINE R1 -763 4593 2903 6 618 3876 25 17 0 chrU 4443727 4444199 -5604838 + CIRCE LINE Composite 5877 6356 0 6 618 7454 18 33 28 chrU 4444199 4445164 -5603873 + CIRCE LINE Composite 1 970 -5386 6 618 1942 86 36 16 chrU 4445306 4445613 -5603424 + CIRCE LINE Composite 973 1285 -5071 6 618 14080 29 7 11 chrU 4445612 4447407 -5601630 + CIRCE LINE Composite 2155 3942 -2414 6 618 562 92 35 0 chrU 4447700 4447787 -5601250 - NTS_DM Other Other -150 90 1 6 618 1437 33 23 19 chrU 4447787 4448001 -5601036 - NTS_DM Other Other 0 240 26 6 618 246 150 0 0 chrU 4448173 4448213 -5600824 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 6 618 246 150 0 0 chrU 4448265 4448305 -5600732 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 6 618 2354 20 214 2 chrU 4448378 4448914 -5600123 + G_DM LINE Jockey 1 650 -3696 6 618 2222 28 0 27 chrU 4448909 4449207 -5599830 + BATUMI_I LTR Pao 6997 7286 -677 6 618 1981 65 7 1 chrU 4449197 4449503 -5599534 + G_DM LINE Jockey 622 925 -1117 6 619 13099 27 24 4 chrU 4457680 4459339 -5589698 - R1_DM LINE R1 -1248 4108 2418 6 619 3647 4 146 0 chrU 4459339 4459826 -5589211 - ACCORD_LTR LTR Gypsy 0 558 1 6 619 1762 0 0 0 chrU 4459826 4460027 -5589010 - ACCORD_I LTR Gypsy 0 6288 6088 6 619 3123 39 5 5 chrU 4460127 4460542 -5588495 - PROTOP_A DNA P -690 415 1 6 619 7724 44 39 32 chrU 4460548 4461656 -5587381 + QUASIMODO_I LTR Gypsy 412 1527 -4533 6 619 2159 46 56 0 chrU 4461676 4461978 -5587059 + QUASIMODO_I LTR Gypsy 1647 1965 -4095 6 619 888 51 0 0 chrU 4461984 4462102 -5586935 + QUASIMODO_I LTR Gypsy 2350 2467 -3593 6 619 4209 48 104 0 chrU 4462100 4462871 -5586166 + QUASIMODO_I LTR Gypsy 2728 3578 -2482 6 619 10266 101 23 26 chrU 4469811 4472301 -5576736 - TART LINE telomeric -3814 10663 8037 6 619 1566 28 0 18 chrU 4472311 4472640 -5576397 + (TATAA)n Simple_repeat Simple_repeat 1 323 0 6 619 4342 2 0 2 chrU 4472740 4473258 -5575779 + BARI_DM DNA Tc1 1211 1727 -1 6 619 14977 0 0 0 chrU 4473258 4474982 -5574055 + BARI_DM DNA Tc1 4 1727 -1 6 619 14805 3 2 0 chrU 4474982 4476704 -5572333 + BARI_DM DNA Tc1 4 1728 0 6 619 749 176 47 46 chrU 4477961 4478292 -5570745 + DNAREP1_DM LINE Penelope 60 332 -262 6 619 232 197 254 0 chrU 4478788 4478859 -5570178 + GTWIN_I LTR Gypsy 2357 2445 -3976 6 619 225 167 0 0 chrU 4478988 4479030 -5570007 + GTWIN_I LTR Gypsy 2684 2725 -3696 6 619 33 0 0 0 chrU 4479040 4479073 -5569964 + AT_rich Low_complexity Low_complexity 1 33 0 6 619 2748 117 49 84 chrU 4479073 4479689 -5569348 - IDEFIX_LTR LTR Gypsy 0 594 1 6 619 258 119 0 0 chrU 4479657 4479699 -5569338 + BARI1 DNA Tc1 3 44 -1706 6 619 504 78 26 0 chrU 4479706 4479783 -5569254 - TC1-2_DM DNA Tc1 -1565 79 1 6 619 1372 141 86 60 chrU 4480305 4481052 -5567985 + DNAREP1_DM LINE Penelope 6 332 -262 6 619 1012 75 25 0 chrU 4481122 4481282 -5567755 + DNAREP1_DM LINE Penelope 1 164 -430 6 619 398 158 12 0 chrU 4481411 4481493 -5567544 - Gypsy8_I LTR Gypsy -4264 83 1 6 619 303 161 18 147 chrU 4481493 4481602 -5567435 - Gypsy8_LTR LTR Gypsy 0 304 210 6 619 1990 43 4 0 chrU 4481594 4481848 -5567189 + PROTOP DNA P 57 311 -4169 6 619 474 72 0 0 chrU 4481913 4481996 -5567041 + PROTOP DNA P 612 695 -3785 6 619 4092 31 38 7 chrU 4481997 4482575 -5566462 - DOC5_DM LINE Jockey -117 4565 3970 6 619 599 116 9 26 chrU 4482586 4482701 -5566336 + RSP Satellite Satellite 6 118 0 6 619 753 139 3 21 chrU 4482721 4483102 -5565935 + RSP Satellite Satellite 1 373 0 6 619 275 65 0 0 chrU 4483107 4483153 -5565884 - DOC5_DM LINE Jockey -1168 3514 3469 6 619 1119 62 0 6 chrU 4483147 4483309 -5565728 - DOC5_DM LINE Jockey -1999 2683 2523 6 619 3364 19 147 2 chrU 4483304 4483879 -5565158 - DOC5_DM LINE Jockey -2279 2403 1745 6 619 6965 47 77 4 chrU 4483874 4485164 -5563873 - DOC5_DM LINE Jockey -3133 1549 134 6 619 552 26 0 25 chrU 4485264 4485343 -5563694 - DMCR1A LINE CR1 -3067 1403 1327 6 619 2061 107 3 15 chrU 4485339 4485671 -5563366 + Gypsy12A_LTR LTR Gypsy 1953 2280 0 6 619 3674 94 15 40 chrU 4485671 4486399 -5562638 + Gypsy12_I LTR Gypsy 1 765 -4781 6 619 2209 194 37 12 chrU 4494449 4494934 -5554103 + Gypsy3_I LTR Gypsy 5111 5607 -570 6 619 18841 35 84 7 chrU 4494944 4497481 -5551556 - DOC3_DM LINE Jockey -174 4566 1834 6 619 1107 64 178 29 chrU 4497479 4497687 -5551350 - DOC3_DM LINE Jockey -3182 1558 1320 6 619 3508 60 12 2 chrU 4497788 4498285 -5550752 - IDEFIX_I LTR Gypsy -1303 4325 3824 6 619 12560 37 26 7 chrU 4498315 4500000 -5549037 - IDEFIX_I LTR Gypsy -2064 3564 1847 6 619 364 104 0 25 chrU 4507520 4507599 -5541438 + MDG1_I LTR Gypsy 6433 6509 -87 6 619 29 0 0 0 chrU 4507600 4507629 -5541408 + AT_rich Low_complexity Low_complexity 1 29 0 6 619 321 190 43 138 chrU 4507716 4507832 -5541205 + DM176_LTR LTR Gypsy 190 294 -213 6 619 283 220 0 0 chrU 4507959 4508018 -5541019 + DM176_LTR LTR Gypsy 308 366 -141 6 619 413 195 30 82 chrU 4508035 4508169 -5540868 + DMTOM1_LTR LTR Gypsy 284 410 0 6 619 399 127 0 27 chrU 4508169 4508233 -5540804 + DMTOM1_LTR LTR Gypsy 349 410 0 6 619 323 205 53 107 chrU 4508233 4508364 -5540673 + ROVER-I_DM LTR Gypsy 1 124 -6460 6 619 1084 297 46 29 chrU 4508792 4509519 -5539518 + ROVER-I_DM LTR Gypsy 392 1487 -5097 6 619 490 270 0 0 chrU 4509978 4510126 -5538911 + ROVER-I_DM LTR Gypsy 1831 1978 -4442 6 619 3174 302 21 24 chrU 4510605 4511884 -5537153 + FROGGER_I LTR Copia 407 1681 -396 6 619 552 257 26 72 chrU 4511917 4512181 -5536856 + FROGGER_I LTR Copia 1786 2037 -40 6 619 2658 201 12 10 chrU 4521205 4522002 -5527035 - SAR_DM Satellite Satellite -489 798 1 6 619 1840 197 9 20 chrU 4522205 4522655 -5526382 - SAR_DM Satellite Satellite -478 994 550 6 619 5653 12 8 5 chrU 4522755 4523419 -5525618 + DM176_I LTR Gypsy 3936 4601 -1819 6 619 5229 8 0 0 chrU 4523412 4524020 -5525017 + DM176_I LTR Gypsy 4445 5052 -1368 6 619 352 65 0 0 chrU 4533165 4533211 -5515826 - S_DM DNA Tc1 -188 1548 1503 6 619 6494 101 12 2 chrU 4533171 4534116 -5514921 + S_DM DNA Tc1 195 1148 -588 6 619 2521 91 0 3 chrU 4534116 4534500 -5514537 + S_DM DNA Tc1 1354 1736 0 6 619 1203 76 365 0 chrU 4534755 4535018 -5514019 + MAX_I LTR Pao 557 915 -6999 6 619 13510 39 2 1 chrU 4535209 4536923 -5512114 + IDEFIX_I LTR Gypsy 3458 5174 -454 6 619 254 330 55 34 chrU 4544656 4544894 -5504143 + Gypsy4_I LTR Gypsy 692 934 -5354 6 619 43 0 0 0 chrU 4545570 4545613 -5503424 + AT_rich Low_complexity Low_complexity 1 43 0 6 619 983 351 37 53 chrU 4546198 4546656 -5502381 + Gypsy4_I LTR Gypsy 2320 2824 -3597 6 619 1576 28 19 0 chrU 4546656 4546870 -5502167 + TLD2 Unknown Unknown 1 218 0 6 619 983 351 37 53 chrU 4546870 4547517 -5501520 + Gypsy4_I LTR Gypsy 2825 3539 -2882 6 619 2667 80 0 3 chrU 4547665 4548027 -5501010 + PROTOP_A DNA P 745 1105 0 6 619 26 30 0 0 chrU 4548377 4548410 -5500627 + AT_rich Low_complexity Low_complexity 1 33 0 6 619 343 298 65 12 chrU 4557343 4557513 -5491524 + NINJA_I LTR Pao 2749 2927 -3084 6 619 574 16 0 0 chrU 4557519 4557583 -5491454 - PROTOP_B DNA P -1089 64 1 6 619 563 131 69 11 chrU 4557701 4557843 -5491194 - TAHRE LINE telomeric -3986 10491 10370 6 619 776 243 169 19 chrU 4557830 4558090 -5490947 - TAHRE LINE telomeric -358 10105 9807 6 619 6435 210 50 57 chrU 4558102 4559943 -5489094 - Gypsy12_LTR LTR Gypsy -23 2313 486 6 619 4685 15 0 6 chrU 4560047 4560589 -5488448 + R1_DM LINE R1 1827 2365 -2991 6 619 8238 25 1 1 chrU 4560581 4561536 -5487501 + R1_DM LINE R1 3704 4658 -698 6 619 780 51 0 20 chrU 4561667 4561767 -5487270 + R1_DM LINE R1 4688 4785 -571 6 619 2249 20 0 0 chrU 4561770 4562022 -5487015 + R1_DM LINE R1 5105 5356 0 6 619 3267 11 0 0 chrU 4562020 4562378 -5486659 + LSU-rRNA_Dme rRNA rRNA 2640 2997 -903 6 619 1814 123 70 0 chrU 4562378 4562678 -5486359 - MAX_LTR LTR Pao 0 321 1 6 619 1026 59 0 0 chrU 4562688 4562823 -5486214 - MAX_I LTR Pao -2 7912 7778 6 619 642 62 0 143 chrU 4570342 4570454 -5478583 - MAX_I LTR Pao -7818 96 1 6 619 1591 131 77 0 chrU 4570454 4570728 -5478309 - MAX_LTR LTR Pao 0 321 27 6 619 8243 6 7 0 chrU 4570734 4571629 -5477408 + LSU-rRNA_Dme rRNA rRNA 3000 3900 0 6 619 228 195 0 0 chrU 4571641 4571682 -5477355 + LSU-rRNA_Dme rRNA rRNA 2580 2620 -1280 6 619 265 150 0 0 chrU 4571734 4571774 -5477263 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 619 265 150 0 0 chrU 4571826 4571866 -5477171 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 619 22 70 0 0 chrU 4571879 4571922 -5477115 + AT_rich Low_complexity Low_complexity 1 43 0 6 619 2338 32 0 0 chrU 4571955 4572234 -5476803 - G2_DM LINE Jockey 0 3102 2824 6 619 233 192 99 99 chrU 4572334 4572415 -5476622 - MICROPIA_I LTR Gypsy -4395 81 1 6 619 252 333 78 19 chrU 4572442 4572647 -5476390 - ACCORD2_I LTR Gypsy -6457 755 539 6 619 649 285 53 19 chrU 4572729 4573051 -5475986 + Copia_I LTR Copia 3406 3738 -855 6 619 4176 27 4 2 chrU 4573051 4573532 -5475505 - Gypsy_LTR LTR Gypsy 0 482 1 6 619 584 29 0 0 chrU 4573532 4573601 -5475436 - Gypsy_I LTR Gypsy 0 6507 6439 6 619 266 206 43 86 chrU 4581958 4582075 -5466962 + Gypsy3_I LTR Gypsy 41 152 -6025 6 619 223 161 33 74 chrU 4582085 4582206 -5466831 + (TTATA)n Simple_repeat Simple_repeat 2 117 0 6 619 795 211 16 128 chrU 4582206 4582511 -5466526 + Gypsy3_I LTR Gypsy 173 443 -5734 6 619 3925 148 130 40 chrU 4582557 4583303 -5465734 + Gypsy3_I LTR Gypsy 645 1457 -4720 6 619 5585 3 0 0 chrU 4583298 4583907 -5465130 + DM1731_I LTR Copia 2305 2913 -1063 6 619 731 12 0 0 chrU 4583899 4583980 -5465057 + DM1731_I LTR Copia 3103 3183 -793 6 619 2332 15 11 18 chrU 4583979 4584255 -5464782 + DM1731_I LTR Copia 3651 3924 -52 6 619 611 182 50 61 chrU 4584620 4584830 -5464207 + DMTOM1_LTR LTR Gypsy 284 488 -19 6 619 426 100 14 28 chrU 4584821 4584893 -5464144 + DMTOM1_LTR LTR Gypsy 340 410 0 6 619 1759 42 308 0 chrU 4585451 4585767 -5463270 + DMCR1A LINE CR1 1589 2001 -2469 6 619 4332 47 107 0 chrU 4585765 4586446 -5462591 + DMCR1A LINE CR1 2696 3493 -977 6 620 3261 40 40 2 chrU 4594898 4595301 -5453736 - DIVER2_I LTR Pao -3042 1105 688 6 620 27 49 0 0 chrU 4595444 4595485 -5453552 + AT_rich Low_complexity Low_complexity 1 41 0 6 620 2145 282 9 11 chrU 4595913 4596659 -5452378 - Copia_I LTR Copia -2336 2257 1513 6 620 6167 115 68 3 chrU 4596824 4597974 -5451063 + IDEFIX_I LTR Gypsy 1922 3562 -2498 6 620 2254 77 10 0 chrU 4606213 4606523 -5442514 + IDEFIX_I LTR Gypsy 3517 3829 -1799 6 620 1366 32 0 0 chrU 4606523 4606681 -5442356 - Copia2_LTR_DM LTR Copia 0 198 41 6 620 11526 23 65 5 chrU 4606694 4608919 -5440118 - Copia2_I LTR Copia 0 4162 1805 6 620 5663 40 96 1 chrU 4609019 4610327 -5438710 - Invader2_I LTR Gypsy -1988 2604 1173 6 620 5105 35 9 0 chrU 4610324 4610957 -5438080 - Invader2_I LTR Gypsy -3952 640 2 6 620 790 75 252 9 chrU 4610973 4611187 -5437850 - Invader2_LTR LTR Gypsy 0 266 1 6 620 700 157 311 10 chrU 4611187 4611485 -5437552 - HMSBEAGLE_I LTR Gypsy -355 6174 5787 6 620 1666 100 29 0 chrU 4611487 4611728 -5437309 - HMSBEAGLE_I LTR Gypsy -901 5628 5381 6 620 1583 11 0 0 chrU 4619927 4620115 -5428922 - Invader2_I LTR Gypsy -642 3950 3763 6 620 7088 31 27 0 chrU 4620113 4621053 -5427984 - Invader2_I LTR Gypsy -1021 3571 2607 6 620 289 153 119 13 chrU 4621154 4621313 -5427724 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 6 620 353 217 106 0 chrU 4621447 4621608 -5427429 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 6 620 201 181 62 91 chrU 4621889 4622065 -5426972 + (AATAG)n Simple_repeat Simple_repeat 5 175 0 6 620 2071 226 88 9 chrU 4622072 4622638 -5426399 + G5_DM LINE Jockey 1077 1687 -3169 6 620 2596 67 173 1 chrU 4622652 4623329 -5425708 + G5A_DM LINE Jockey 268 1060 -1781 6 620 4823 116 121 1 chrU 4628822 4629848 -5419189 - DMRT1B LINE R1 -1220 3963 2815 6 620 4041 131 59 1 chrU 4629887 4630567 -5418470 - DMRT1B LINE R1 -926 4257 3539 6 620 310 89 0 0 chrU 4630581 4630626 -5418411 - DMRT1B LINE R1 -1849 3334 3290 6 620 5075 136 107 2 chrU 4630608 4632257 -5416780 - DMRT1B LINE R1 -2658 2525 703 6 620 896 109 77 0 chrU 4632276 4632432 -5416605 - DMRT1B LINE R1 -4580 603 436 6 620 255 157 0 19 chrU 4632449 4632501 -5416536 - DMRT1B LINE R1 -4978 205 155 6 620 227 154 0 0 chrU 4632644 4632683 -5416354 + DMCR1A LINE CR1 4180 4218 -252 6 620 46 54 0 0 chrU 4632998 4633072 -5415965 + AT_rich Low_complexity Low_complexity 1 74 0 6 620 2968 9 75 3 chrU 4633254 4633903 -5415134 - STALKER4_I LTR Gypsy -1640 4890 4195 6 620 1730 117 70 0 chrU 4633903 4634203 -5414834 + MAX_LTR LTR Pao 1 321 0 6 620 412 56 0 182 chrU 4634203 4634291 -5414746 + MAX_I LTR Pao 1 72 -7842 6 620 618 306 134 54 chrU 4643327 4644932 -5404105 - Copia_I LTR Copia -2309 2284 551 6 620 688 200 44 34 chrU 4644971 4645240 -5403797 - HELENA_RT LINE Jockey 0 1317 1223 6 620 11079 37 27 5 chrU 4645340 4645655 -5403382 + MDG1_I LTR Gypsy 4538 4852 -1744 6 620 396 0 0 0 chrU 4645655 4645699 -5403338 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 620 11079 37 27 5 chrU 4645699 4646865 -5402172 + MDG1_I LTR Gypsy 4853 6051 -545 6 620 940 331 33 30 chrU 4655524 4656249 -5392788 - MICROPIA_I LTR Gypsy -3389 710 1 6 620 247 321 24 93 chrU 4656276 4656523 -5392514 - ACCORD2_I LTR Gypsy -6457 755 526 6 620 226 220 0 0 chrU 4657064 4657114 -5391923 + Copia2_I LTR Copia 590 639 -3523 6 620 31 58 0 0 chrU 4657476 4657528 -5391509 + AT_rich Low_complexity Low_complexity 1 52 0 6 620 3159 53 1 14 chrU 4657616 4658055 -5390982 - STALKER4_LTR LTR Gypsy -3 399 1 6 620 4149 38 70 2 chrU 4658055 4658614 -5390423 + DOC4_DM LINE Jockey 2195 2791 0 6 620 302 147 0 42 chrU 4658689 4658760 -5390277 + DOC LINE Jockey 4625 4692 -33 6 620 234 196 0 0 chrU 4658987 4659033 -5390004 + TIRANT_I LTR Gypsy 3794 3839 -3853 6 620 736 164 104 0 chrU 4659056 4659239 -5389798 - DMCR1A LINE CR1 -51 4419 4218 6 620 1727 144 77 12 chrU 4659236 4659574 -5389463 - DMCR1A LINE CR1 -813 3657 3298 6 620 662 141 62 128 chrU 4659725 4659920 -5389117 + DNAREP1_DM LINE Penelope 53 234 -360 6 620 227 156 200 15 chrU 4660197 4660262 -5388775 + DNAREP1_DM LINE Penelope 410 486 -108 6 620 2463 104 57 0 chrU 4661082 4661602 -5387435 + DOC3_DM LINE Jockey 3795 4359 -366 6 620 11346 42 52 37 chrU 4667666 4669383 -5379654 + BATUMI_I LTR Pao 171 1914 -6049 6 620 278 288 0 0 chrU 4669544 4669624 -5379413 + Gypsy_DS LTR Gypsy 3256 3335 -4187 6 620 1435 37 19 0 chrU 4669555 4669769 -5379268 + TLD2 Unknown Unknown 1 218 0 6 620 375 286 57 45 chrU 4669595 4669992 -5379045 + DM297_I LTR Gypsy 2671 3339 -3081 6 620 486 302 45 45 chrU 4669984 4670285 -5378752 + GTWIN_I LTR Gypsy 2969 3496 -2925 6 620 225 206 78 52 chrU 4670476 4670553 -5378484 + Gypsy6_I LTR Gypsy 4628 4706 -2306 6 620 237 159 73 73 chrU 4670690 4670758 -5378279 + Gypsy4_I LTR Gypsy 4324 4391 -1897 6 620 26 50 0 0 chrU 4671087 4671127 -5377910 + AT_rich Low_complexity Low_complexity 1 40 0 6 620 1676 272 92 26 chrU 4680311 4681358 -5367679 - QUASIMODO_I LTR Gypsy -512 5548 4433 6 620 2382 21 0 0 chrU 4681534 4681819 -5367218 - PROTOP_A DNA P -820 285 1 6 620 1240 163 51 93 chrU 4681819 4682437 -5366600 - TART LINE telomeric -7545 6932 6655 6 620 10507 2 0 0 chrU 4682442 4683657 -5365380 - DMRT1B LINE R1 0 5183 3969 6 620 556 70 0 66 chrU 4683659 4683750 -5365287 - TART LINE telomeric -10709 3768 3684 6 620 4553 82 77 43 chrU 4683746 4684567 -5364470 - TART LINE telomeric -11115 3362 2514 6 620 5663 49 83 0 chrU 4692118 4692932 -5356105 - TART LINE telomeric -11551 2926 2045 6 620 2484 68 62 0 chrU 4692923 4693277 -5355760 - TART LINE telomeric -12618 1859 1484 6 620 6299 41 24 145 chrU 4693377 4694640 -5354397 - BATUMI_I LTR Pao -6853 1110 1 6 620 1658 54 8 29 chrU 4694640 4694886 -5354151 - BATUMI_LTR LTR Pao 0 272 32 6 620 30 0 0 0 chrU 4694940 4694970 -5354067 + AT_rich Low_complexity Low_complexity 1 30 0 6 620 203 238 12 24 chrU 4695054 4695136 -5353901 + (TAA)n Simple_repeat Simple_repeat 3 83 0 6 620 213 156 0 22 chrU 4695086 4695132 -5353905 + A-rich Low_complexity Low_complexity 5 49 0 6 620 1587 99 114 0 chrU 4695138 4695410 -5353627 - Gypsy9_LTR LTR Gypsy 0 336 34 6 620 8826 126 74 108 chrU 4695412 4697759 -5351278 - Gypsy9_I LTR Gypsy 0 4677 2412 6 620 2876 272 79 10 chrU 4697758 4698804 -5350233 - Gypsy9_I LTR Gypsy -3388 2900 1782 6 620 400 74 0 0 chrU 4698823 4698877 -5350160 - Gypsy9_I LTR Gypsy -3381 1296 1243 6 620 242 87 22 0 chrU 4698941 4698987 -5350050 + (TTTTTG)n Simple_repeat Simple_repeat 1 47 0 6 620 7226 125 48 30 chrU 4698990 4700480 -5348557 - Gypsy9_I LTR Gypsy -4949 1339 12 6 620 1627 85 68 0 chrU 4700465 4700713 -5348324 - Gypsy9_LTR LTR Gypsy -71 265 1 6 620 333 47 0 0 chrU 4700731 4700774 -5348263 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 620 25 0 0 0 chrU 4700872 4700897 -5348140 + AT_rich Low_complexity Low_complexity 1 25 0 6 620 501 136 55 141 chrU 4701256 4701419 -5347618 + MICROPIA_LTR LTR Gypsy 233 381 -95 6 620 21 0 0 0 chrU 4701812 4701833 -5347204 + AT_rich Low_complexity Low_complexity 1 21 0 6 620 21 0 0 0 chrU 4702000 4702021 -5347016 + AT_rich Low_complexity Low_complexity 1 21 0 6 620 218 284 0 43 chrU 4702405 4702497 -5346540 + A-rich Low_complexity Low_complexity 1 88 0 6 620 22 0 0 0 chrU 4702539 4702561 -5346476 + AT_rich Low_complexity Low_complexity 1 22 0 6 620 26 30 0 0 chrU 4702603 4702636 -5346401 + AT_rich Low_complexity Low_complexity 1 33 0 6 620 281 209 45 34 chrU 4703003 4703092 -5345945 + ACCORD2_I LTR Gypsy 2448 2537 -4675 6 620 1022 279 26 39 chrU 4703532 4704037 -5345000 + ZAM_I LTR Gypsy 4114 4779 -2913 6 620 1302 53 0 0 chrU 4704300 4704469 -5344568 - Gypsy9_I LTR Gypsy -3612 1065 897 6 620 3054 95 56 66 chrU 4704465 4705073 -5343964 - Gypsy9_I LTR Gypsy -3892 785 184 6 620 8278 166 66 2 chrU 4705173 4706789 -5342248 + Gypsy5_I LTR Gypsy 1484 3201 -3308 6 620 2827 165 80 7 chrU 4706794 4707369 -5341668 + Gypsy5_I LTR Gypsy 3625 4241 -2268 6 620 4039 40 36 11 chrU 4714421 4714976 -5334061 + BATUMI_I LTR Pao 2906 3474 -4489 6 620 2403 34 9 9 chrU 4714969 4715294 -5333743 - BATUMI_I LTR Pao -1212 6751 6427 6 620 2066 309 27 14 chrU 4715028 4715922 -5333115 + BATUMI_I LTR Pao 6984 7962 -1 6 620 1753 42 4 28 chrU 4715944 4716191 -5332846 + BATUMI_LTR LTR Pao 32 272 0 6 620 5003 13 0 0 chrU 4716191 4716797 -5332240 - STALKER4_I LTR Gypsy -947 5583 4978 6 620 6423 45 176 44 chrU 4716897 4717940 -5331097 - R1_DM LINE R1 -4176 1180 1 6 620 829 30 0 0 chrU 4717973 4718072 -5330965 - R1_DM LINE R1 0 5356 5258 6 621 4681 27 47 1 chrU 4727386 4728419 -5320618 - R1_DM LINE R1 -1364 3992 2912 6 621 4717 18 123 3 chrU 4728519 4729661 -5319376 + MICROPIA_I LTR Gypsy 1991 3269 -1207 6 621 956 0 0 9 chrU 4729667 4729777 -5319260 + MICROPIA_LTR LTR Gypsy 346 454 -22 6 621 1459 75 138 8 chrU 4738877 4739268 -5309769 + DM412 LTR Gypsy 3216 3657 -3240 6 621 1908 133 90 0 chrU 4739259 4739627 -5309410 + DM412 LTR Gypsy 1109 1509 -5388 6 621 2258 141 25 10 chrU 4739624 4740025 -5309012 + DM412 LTR Gypsy 1623 2029 -4868 6 621 2386 4 4 0 chrU 4740125 4740388 -5308649 - DM176_I LTR Gypsy -1860 4560 4297 6 621 8021 11 1 29 chrU 4740386 4741331 -5307706 - DM176_I LTR Gypsy -2741 3679 2761 6 621 2786 276 40 17 chrU 4750614 4751542 -5297495 - GTWIN_I LTR Gypsy -1512 4909 3961 6 621 7981 46 12 40 chrU 4751658 4752744 -5296293 - BATUMI_I LTR Pao -5176 2787 1733 6 621 3763 20 0 0 chrU 4761788 4762229 -5286808 - ROO_I LTR Pao -1371 6885 6445 6 621 362 24 0 0 chrU 4762224 4762265 -5286772 - ROO_I LTR Pao -1994 6262 6222 6 621 4478 40 36 2 chrU 4762262 4762818 -5286219 - ROO_I LTR Pao -2252 6004 5430 6 621 526 30 30 0 chrU 4762798 4762864 -5286173 - ROO_I LTR Pao -2970 5286 5219 6 621 1117 299 31 31 chrU 4763054 4763554 -5285483 + Copia2_I LTR Copia 1386 1977 -2185 6 621 301 293 5 5 chrU 4763673 4763784 -5285253 + FROGGER_I LTR Copia 198 278 -1799 6 621 225 295 43 43 chrU 4763872 4763989 -5285048 + FROGGER_I LTR Copia 2098 2214 -1948 6 621 2099 43 24 0 chrU 4772793 4773046 -5275991 - ROOA_LTR LTR Pao -127 259 1 6 621 575 141 43 0 chrU 4773049 4773141 -5275896 - TRANSIB2 DNA Transib -516 2328 2233 6 621 1629 47 140 0 chrU 4773165 4773400 -5275637 - TRANSIB2 DNA Transib 0 2844 2577 6 621 5528 51 67 1 chrU 4773401 4774123 -5274914 - TRANSIB2 DNA Transib -1422 1422 654 6 621 11463 21 40 7 chrU 4774223 4775581 -5273456 - FW_DM LINE Jockey -2457 2235 833 6 621 3566 25 5 14 chrU 4784275 4784715 -5264322 + R1_DM LINE R1 4631 5066 -290 6 621 866 54 27 0 chrU 4784712 4784823 -5264214 + R1_DM LINE R1 5243 5356 0 6 621 3736 61 4 6 chrU 4784856 4785349 -5263688 + R1_DM LINE R1 1 492 -4864 6 621 4175 204 41 22 chrU 4785449 4794450 -5254587 - SAR_DM Satellite Satellite -270 9172 1 6 621 660 175 15 0 chrU 4794355 4794492 -5254545 + ARS406_DM Unknown Unknown 1 139 -214 6 621 3888 209 43 21 chrU 4794503 4798089 -5250948 - SAR_DM Satellite Satellite -308 3663 1 6 621 15602 3 0 0 chrU 4798090 4799823 -5249214 + BS2 LINE Jockey 14 1746 -2975 6 621 4175 204 46 14 chrU 4800218 4804633 -5244404 - SAR_DM Satellite Satellite -616 4552 1 6 621 254 159 15 45 chrU 4804581 4804647 -5244390 + ARS406_DM Unknown Unknown 8 71 -282 6 621 4335 194 39 20 chrU 4804654 4807882 -5241155 - SAR_DM Satellite Satellite -844 3286 1 6 621 4158 205 35 21 chrU 4812692 4817521 -5231516 - SAR_DM Satellite Satellite -1059 4896 1 6 621 4424 0 0 2 chrU 4817523 4818025 -5231012 - POGO DNA Pogo 0 2121 1621 6 621 2189 174 43 16 chrU 4824204 4824719 -5224318 - SAR_DM Satellite Satellite -702 770 242 6 621 3405 278 51 21 chrU 4824731 4826475 -5222562 - SAR_DM Satellite Satellite -255 1795 1 6 621 1299 13 0 0 chrU 4826575 4826724 -5222313 + (GAGAA)n Simple_repeat Simple_repeat 2 150 0 6 621 284 89 0 18 chrU 4826737 4826794 -5222243 + DNAREP1_DM LINE Penelope 88 143 -451 6 621 4050 342 67 10 chrU 4826794 4828836 -5220201 - NINJA_I LTR Pao -773 5238 3081 6 621 608 314 79 13 chrU 4828864 4829167 -5219870 - NINJA_I LTR Pao -3041 2970 2648 6 621 927 340 75 29 chrU 4829191 4830052 -5218985 - NINJA_I LTR Pao -3422 2589 1689 6 621 40 21 0 0 chrU 4830187 4830234 -5218803 + AT_rich Low_complexity Low_complexity 1 47 0 6 621 415 312 55 26 chrU 4837267 4837542 -5211495 - DM297_I LTR Gypsy -2883 3538 3234 6 621 790 309 39 36 chrU 4837720 4837867 -5211170 - DM297_I LTR Gypsy -3176 2991 2825 6 621 1513 38 24 0 chrU 4837867 4838080 -5210957 - TLD2 Unknown Unknown 0 218 1 6 621 790 309 39 36 chrU 4838080 4838523 -5210514 - DM297_I LTR Gypsy -3176 2824 2320 6 621 344 315 71 49 chrU 4839623 4839973 -5209064 - Gypsy4_I LTR Gypsy -5223 1065 708 6 621 27 49 0 0 chrU 4840296 4840337 -5208700 + AT_rich Low_complexity Low_complexity 1 41 0 6 621 30 0 0 0 chrU 4840697 4840727 -5208310 + AT_rich Low_complexity Low_complexity 1 30 0 6 621 9301 33 14 1 chrU 4847889 4848975 -5200062 - MAX_I LTR Pao -4793 3121 2022 6 77 3757 111 41 276 chrU 4849007 4850776 -5198261 - MAX_I LTR Pao -6560 1354 1 6 622 1219 134 138 4 chrU 4850776 4851016 -5198021 - MAX_LTR LTR Pao 0 321 50 6 622 21 0 0 0 chrU 4851686 4851707 -5197330 + AT_rich Low_complexity Low_complexity 1 21 0 6 622 226 219 78 52 chrU 4852317 4852394 -5196643 - Gypsy6_I LTR Gypsy -2306 4706 4628 6 622 629 337 59 49 chrU 4852987 4853621 -5195416 - Gypsy4_I LTR Gypsy -2815 3473 2669 6 622 1468 47 24 0 chrU 4853621 4853834 -5195203 - TLD2 Unknown Unknown 0 218 1 6 622 629 337 59 49 chrU 4853834 4854020 -5195017 - Gypsy4_I LTR Gypsy -2815 2668 2431 6 622 10190 1 0 0 chrU 4854131 4855234 -5193803 - FW_DM LINE Jockey -2411 2281 1179 6 622 5117 2 0 2 chrU 4855234 4855787 -5193250 + DOC LINE Jockey 3 554 -4171 6 622 5449 0 0 0 chrU 4859852 4860450 -5188587 + DOC LINE Jockey 4127 4724 -1 6 622 9332 5 0 0 chrU 4860449 4861469 -5187568 - FW_DM LINE Jockey -3633 1059 40 6 622 2386 80 38 13 chrU 4861542 4861937 -5187100 + DMSAT6 Satellite Satellite 57 461 -9 6 622 2769 80 34 34 chrU 4863155 4865147 -5183890 + DMSAT6 Satellite Satellite 1 1991 -3 6 622 2654 94 0 62 chrU 4866860 4867358 -5181679 + DMSAT6 Satellite Satellite 1 467 -3 6 622 2674 99 34 10 chrU 4868135 4869371 -5179666 + DMSAT6 Satellite Satellite 1 1266 0 6 622 2637 90 22 40 chrU 4870566 4872724 -5176313 + DMSAT6 Satellite Satellite 1 2120 -69 6 622 903 72 22 0 chrU 4873372 4873510 -5175527 + DMSAT6 Satellite Satellite 269 409 -61 6 622 5514 7 0 0 chrU 4876658 4877262 -5171775 - FW_DM LINE Jockey -3721 971 368 6 622 2532 87 10 40 chrU 4878428 4878909 -5170128 + DMSAT6 Satellite Satellite 1 467 -3 6 622 1620 26 0 20 chrU 4880228 4880921 -5168116 + (TATAA)n Simple_repeat Simple_repeat 1 678 0 6 622 1513 48 43 0 chrU 4881251 4881439 -5167598 + DMTOM1_LTR LTR Gypsy 107 302 -108 6 622 556 337 85 47 chrU 4882125 4882962 -5166075 + Gypsy12_I LTR Gypsy 3215 4083 -1463 6 622 540 346 11 18 chrU 4882795 4883069 -5165968 + CIRCE LINE Composite 1899 2170 -4186 6 622 329 219 24 16 chrU 4883680 4883805 -5165232 + A-rich Low_complexity Low_complexity 2 127 0 6 622 180 0 0 0 chrU 4883903 4883923 -5165114 + (CATA)n Simple_repeat Simple_repeat 3 22 0 6 622 1341 225 46 23 chrU 4884820 4885170 -5163867 + Gypsy12_LTR LTR Gypsy 55 412 -1924 6 622 1263 266 97 64 chrU 4885181 4885900 -5163137 + Gypsy12_LTR LTR Gypsy 455 1197 -1139 6 622 11439 15 22 0 chrU 4890536 4891843 -5157194 - DMRT1B LINE R1 -1560 3623 2288 6 622 3880 105 7 0 chrU 4891901 4892444 -5156593 - GTWIN_I LTR Gypsy 0 6421 5875 6 622 362 155 0 0 chrU 4892442 4892500 -5156537 - GTWIN_I LTR Gypsy -83 6338 6281 6 622 33080 115 25 35 chrU 4892505 4897597 -5151440 - GTWIN_I LTR Gypsy -1381 5040 1 6 622 2236 146 34 27 chrU 4897670 4898108 -5150929 - GTWIN_LTR LTR Gypsy -54 441 1 6 622 19218 100 32 3 chrU 4898108 4900787 -5148250 + Gypsy12_I LTR Gypsy 1220 3978 -1568 6 622 1950 5 0 18 chrU 4901279 4901498 -5147539 + ACCORD2_LTR LTR Gypsy 1 215 0 6 622 1173 19 42 83 chrU 4901498 4901666 -5147371 + ACCORD2_I LTR Gypsy 1 161 -7051 6 622 4842 25 34 0 chrU 4901665 4902230 -5146807 + ACCORD2_I LTR Gypsy 342 925 -6287 6 622 3771 29 0 4 chrU 4902305 4902753 -5146284 + ACCORD2_I LTR Gypsy 6756 7201 -11 6 622 1718 19 33 24 chrU 4902753 4902966 -5146071 + ACCORD2_LTR LTR Gypsy 1 215 0 6 622 1904 55 17 34 chrU 4902966 4903329 -5145708 + ACCORD2_I LTR Gypsy 1136 1367 -5845 6 622 21871 23 16 9 chrU 4903403 4906050 -5142987 + ACCORD2_I LTR Gypsy 1507 4172 -3040 6 622 8894 4 41 2 chrU 4906150 4907233 -5141804 + QUASIMODO_I LTR Gypsy 4835 5959 -101 6 622 2553 75 42 3 chrU 4907983 4908343 -5140694 - TRANSIB2 DNA Transib 0 2844 2471 6 622 1297 52 18 0 chrU 4908359 4908635 -5140402 - TRANSIB2 DNA Transib -1334 1510 1177 6 622 1487 50 0 0 chrU 4908659 4908838 -5140199 - TRANSIB2 DNA Transib -1826 1018 840 6 622 3236 52 125 2 chrU 4908836 4909292 -5139745 - TRANSIB2 DNA Transib -2327 517 6 6 622 28 48 0 0 chrU 4909481 4909523 -5139514 + AT_rich Low_complexity Low_complexity 1 42 0 6 622 24 32 0 0 chrU 4909773 4909804 -5139233 + AT_rich Low_complexity Low_complexity 1 31 0 6 622 210 125 40 40 chrU 4909817 4909867 -5139170 + (TTTAA)n Simple_repeat Simple_repeat 5 54 0 6 622 1640 114 79 66 chrU 4909872 4910265 -5138772 + DM297_LTR LTR Gypsy 16 413 -1 6 622 3541 45 38 0 chrU 4910286 4910734 -5138303 + QUASIMODO_LTR LTR Gypsy 1 465 -193 6 622 29 47 0 0 chrU 4911422 4911465 -5137572 + AT_rich Low_complexity Low_complexity 1 43 0 6 622 339 281 54 26 chrU 4911935 4912126 -5136911 + G7_DM LINE Jockey 700 874 -318 6 622 1039 183 11 0 chrU 4912349 4912535 -5136502 - PROTOP_B DNA P -918 235 48 6 622 12123 99 10 0 chrU 4912663 4913829 -5135208 - Gypsy12_I LTR Gypsy -1470 4076 2901 6 622 207 0 0 0 chrU 4913829 4913852 -5135185 + (TTCC)n Simple_repeat Simple_repeat 4 26 0 6 622 12123 99 10 0 chrU 4913852 4914316 -5134721 - Gypsy12_I LTR Gypsy -2646 2900 2431 6 622 1217 94 61 11 chrU 4914355 4914632 -5134405 + Invader5_LTR LTR Gypsy 1 352 0 6 622 3079 82 66 0 chrU 4914632 4915056 -5133981 + Invader5_I LTR Gypsy 1 452 -2882 6 622 1709 136 94 149 chrU 4915062 4915626 -5133411 + Invader5_I LTR Gypsy 2239 3335 -1141 6 622 574 117 42 50 chrU 4915604 4915743 -5133294 + Invader5_I LTR Gypsy 2890 3061 -273 6 622 5093 51 132 6 chrU 4915744 4917499 -5131538 + DOC3_DM LINE Jockey 192 2259 -2481 6 622 6572 52 29 4 chrU 4917477 4918306 -5130731 + DOC3_DM LINE Jockey 2683 3532 -1208 6 622 3764 150 57 5 chrU 4918301 4919294 -5129743 + DOC3_DM LINE Jockey 3498 4671 -69 6 622 198 0 0 0 chrU 4919312 4919334 -5129703 + (TAA)n Simple_repeat Simple_repeat 2 23 0 6 622 1017 137 278 0 chrU 4919349 4919583 -5129454 + PROTOP DNA P 4182 4480 0 6 622 248 91 91 0 chrU 4919611 4919655 -5129382 - Invader2_I LTR Gypsy -5 4587 4540 6 622 2800 100 112 9 chrU 4919650 4920104 -5128933 - Invader2_I LTR Gypsy -1430 3162 2662 6 622 1216 58 0 0 chrU 4920125 4920280 -5128757 - Invader2_I LTR Gypsy -3170 1422 1268 6 622 1472 139 63 8 chrU 4920289 4920528 -5128509 - Invader2_I LTR Gypsy -3620 972 721 6 622 32 67 0 0 chrU 4920528 4920588 -5128449 + AT_rich Low_complexity Low_complexity 1 60 0 6 622 692 130 0 0 chrU 4921096 4921204 -5127833 - Invader2_I LTR Gypsy -3865 727 620 6 622 821 200 152 27 chrU 4921204 4921461 -5127576 + Gypsy5_LTR LTR Gypsy 1 289 -141 6 622 1601 43 0 0 chrU 4922268 4922455 -5126582 + PROTOP_A DNA P 1 187 -918 6 622 12747 87 23 1 chrU 4922438 4924946 -5124091 - Gypsy12_I LTR Gypsy -1250 4296 1 6 622 4130 13 0 61 chrU 4924946 4925453 -5123584 - MICROPIA_LTR LTR Gypsy 0 476 1 6 622 592 242 39 44 chrU 4925453 4925679 -5123358 - Gypsy12_LTR LTR Gypsy -1216 1120 896 6 622 3042 239 20 62 chrU 4926126 4927061 -5121976 - Gypsy12_LTR LTR Gypsy -1440 896 1 6 622 10229 225 37 10 chrU 4927063 4928757 -5120280 - Gypsy12_I LTR Gypsy -2 5544 3806 6 622 4216 85 27 0 chrU 4928917 4929471 -5119566 - Gypsy12_I LTR Gypsy -1977 3569 3001 6 622 2544 7 42 0 chrU 4929473 4929759 -5119278 + Invader3_LTR LTR Gypsy 1 298 0 6 622 2989 6 0 0 chrU 4929759 4930088 -5118949 + Invader3_I LTR Gypsy 1 329 -4559 6 622 301 143 135 0 chrU 4930266 4930399 -5118638 + (TCTG)n Simple_repeat Simple_repeat 4 154 0 6 622 867 133 72 6 chrU 4930487 4930653 -5118384 + DNAREP1_DM LINE Penelope 142 318 -276 6 622 549 140 193 0 chrU 4930642 4930756 -5118281 + DNAREP1_DM LINE Penelope 459 594 0 6 622 21 0 0 0 chrU 4930793 4930814 -5118223 + AT_rich Low_complexity Low_complexity 1 21 0 6 622 26 0 0 0 chrU 4930950 4930976 -5118061 + AT_rich Low_complexity Low_complexity 1 26 0 6 622 3589 17 0 2 chrU 4931158 4931562 -5117475 + PROTOP_A DNA P 1 403 -702 6 622 4650 44 0 0 chrU 4931594 4932140 -5116897 - DMCR1A LINE CR1 -2370 2100 1555 6 622 1570 37 5 0 chrU 4932142 4932332 -5116705 - DMCR1A LINE CR1 -3091 1379 1189 6 622 266 105 0 0 chrU 4932331 4932369 -5116668 + Invader5_LTR LTR Gypsy 315 352 0 6 622 46 45 0 0 chrU 4932382 4932449 -5116588 + AT_rich Low_complexity Low_complexity 1 67 0 6 622 576 137 97 57 chrU 4932784 4932908 -5116129 + DNAREP1_DM LINE Penelope 1 129 -465 6 622 756 177 124 17 chrU 4932907 4933192 -5115845 - DNAREP1_DM LINE Penelope -262 332 94 6 622 372 128 270 18 chrU 4933186 4933297 -5115740 - DNAREP1_DM LINE Penelope -262 332 194 6 622 286 134 194 0 chrU 4933320 4933387 -5115650 + DNAREP1_DM LINE Penelope 192 271 -323 6 622 1522 166 25 21 chrU 4933386 4933766 -5115271 + DNAREP1_DM LINE Penelope 36 332 -262 6 622 333 112 343 9 chrU 4933754 4933862 -5115175 + DNAREP1_DM LINE Penelope 189 332 -262 6 622 393 202 17 9 chrU 4933842 4933957 -5115080 + DNAREP1_DM LINE Penelope 184 299 -295 6 622 1332 63 132 0 chrU 4934013 4934203 -5114834 - DMCR1A LINE CR1 -428 4042 3828 6 622 1799 64 119 0 chrU 4934222 4934473 -5114564 - DMCR1A LINE CR1 -1159 3311 3031 6 622 2261 87 7 6 chrU 4934473 4934903 -5114134 - DMCR1A LINE CR1 -1553 2917 2388 6 622 7813 36 2 1 chrU 4942287 4943198 -5105839 - DMCR1A LINE CR1 -2370 2100 1189 6 622 266 105 0 0 chrU 4943197 4943235 -5105802 + Invader5_LTR LTR Gypsy 315 352 0 6 622 46 45 0 0 chrU 4943248 4943315 -5105722 + AT_rich Low_complexity Low_complexity 1 67 0 6 622 578 52 0 0 chrU 4943417 4943494 -5105543 - DMCR1A LINE CR1 -3205 1265 1189 6 622 266 105 0 0 chrU 4943493 4943531 -5105506 + Invader5_LTR LTR Gypsy 315 352 0 6 622 46 45 0 0 chrU 4943544 4943611 -5105426 + AT_rich Low_complexity Low_complexity 1 67 0 6 622 36 70 0 0 chrU 4944193 4944264 -5104773 + AT_rich Low_complexity Low_complexity 1 71 0 6 622 465 257 52 25 chrU 4945832 4946070 -5102967 - Gypsy4_I LTR Gypsy -2815 3473 3237 6 622 409 270 123 46 chrU 4946072 4946398 -5102639 - DM176_I LTR Gypsy -2984 3436 3086 6 622 225 100 38 57 chrU 4946385 4946438 -5102599 - TLD2 Unknown Unknown 0 218 167 6 622 2886 33 0 0 chrU 4946725 4947055 -5101982 + DIVER2_LTR LTR Pao 1 330 -55 6 622 2576 75 46 3 chrU 4947088 4947434 -5101603 + DIVER2_I LTR Pao 79 439 -3708 6 622 510 63 0 0 chrU 4947680 4947743 -5101294 + DIVER2_I LTR Pao 546 608 -3539 6 622 593 128 97 57 chrU 4948056 4948180 -5100857 + DNAREP1_DM LINE Penelope 1 129 -465 6 622 756 177 126 19 chrU 4948179 4948477 -5100560 - DNAREP1_DM LINE Penelope -262 332 94 6 622 1845 95 45 0 chrU 4948939 4949203 -5099834 + G5A_DM LINE Jockey 628 903 -1938 6 622 1199 199 134 3 chrU 4949199 4949321 -5099716 + G5_DM LINE Jockey 3149 3307 -1549 6 622 198 0 0 0 chrU 4949321 4949343 -5099694 + (AACTG)n Simple_repeat Simple_repeat 4 25 0 6 622 1229 75 0 0 chrU 4949343 4949503 -5099534 + G5A_DM LINE Jockey 1350 1509 -1332 6 622 777 42 0 0 chrU 4949501 4949596 -5099441 + G5A_DM LINE Jockey 1946 2040 -801 6 622 1697 43 181 0 chrU 4949592 4949824 -5099213 + G5A_DM LINE Jockey 2175 2448 -393 6 622 955 60 0 0 chrU 4949852 4949969 -5099068 - G5A_DM LINE Jockey -231 2610 2494 6 622 282 167 0 43 chrU 4949966 4950035 -5099002 - DNAREP1_DM LINE Penelope -330 264 199 6 622 821 148 7 0 chrU 4951456 4951598 -5097439 + DNAREP1_DM LINE Penelope 1 143 -451 6 622 892 91 0 0 chrU 4951675 4951796 -5097241 + DNAREP1_DM LINE Penelope 279 399 -195 6 622 4299 44 21 2 chrU 4951902 4952424 -5096613 + DMCR1A LINE CR1 878 1409 -3061 6 622 442 148 18 44 chrU 4952436 4952549 -5096488 + DNAREP1_DM LINE Penelope 210 319 -275 6 622 1038 212 142 46 chrU 4952625 4952971 -5096066 + R1-2_DM LINE R1 117 495 -4861 6 622 352 145 11 11 chrU 4953402 4953491 -5095546 + R1-2_DM LINE R1 1 46 -3170 6 622 281 185 0 0 chrU 4953490 4953544 -5095493 + DM297_I LTR Gypsy 1500 1553 -4614 6 622 2671 70 196 27 chrU 4953562 4954042 -5094995 + DMCR1A LINE CR1 1 561 -3909 6 622 1653 85 302 19 chrU 4954065 4954531 -5094506 + R1-2_DM LINE R1 1 598 -2618 6 622 754 128 0 0 chrU 4961303 4961420 -5087617 + R1-2_DM LINE R1 379 495 -4861 6 622 1435 138 146 7 chrU 4961783 4962068 -5086969 + R1-2_DM LINE R1 1 282 -2934 6 622 2784 89 91 9 chrU 4962090 4962521 -5086516 + R1-2_DM LINE R1 669 1134 -2082 6 622 347 242 31 10 chrU 4962883 4962979 -5086058 + R1_DM LINE R1 5247 5344 -12 6 622 582 99 369 0 chrU 4963004 4963170 -5085867 + DM297_LTR LTR Gypsy 187 414 0 6 622 537 61 60 12 chrU 4963170 4963253 -5085784 + DM297_I LTR Gypsy 1 87 -6080 6 622 1172 95 112 0 chrU 4963241 4963420 -5085617 - DM297_I LTR Gypsy -5379 788 590 6 622 2910 94 110 18 chrU 4963418 4963927 -5085110 + DM297_I LTR Gypsy 790 1345 -4822 6 622 388 143 0 0 chrU 4963947 4964010 -5085027 + DM297_I LTR Gypsy 1491 1553 -4614 6 622 4687 187 82 75 chrU 4964033 4965428 -5083609 + DMCR1A LINE CR1 5 1409 -3061 6 622 1347 142 61 30 chrU 4965440 4965744 -5083293 + DNAREP1_DM LINE Penelope 117 399 -195 6 622 754 128 0 0 chrU 4966079 4966196 -5082841 + R1_DM LINE R1 379 495 -4861 6 622 4802 63 0 2 chrU 4966600 4967206 -5081831 - IDEFIX_I LTR Gypsy -3237 2391 1787 6 622 383 23 0 0 chrU 4967201 4967244 -5081793 + CIRCE LINE Composite 4331 4373 -1983 6 622 4784 8 0 0 chrU 4967244 4967775 -5081262 + QUASIMODO_LTR LTR Gypsy 1 531 -127 6 622 6026 179 74 12 chrU 4975506 4977329 -5071708 - DM412 LTR Gypsy -885 6012 3992 6 622 269 324 90 35 chrU 4977914 4978170 -5070867 - BLASTOPIA_I LTR Gypsy -671 3810 3541 6 622 363 287 31 25 chrU 4978492 4978653 -5070384 - MDG3_I LTR Gypsy -1562 3424 3263 6 77 321 247 0 11 chrU 4980695 4980785 -5068252 - ZAM_I LTR Gypsy -4727 2763 2675 6 623 310 58 36 71 chrU 4981387 4981443 -5067594 + BATUMI_LTR LTR Pao 215 268 -4 6 623 2994 48 20 25 chrU 4981450 4981852 -5067185 + BATUMI_I LTR Pao 1 400 -7563 6 623 14127 103 83 98 chrU 4981858 4984708 -5064329 - HETA LINE telomeric -9 6072 3265 6 623 972 26 0 0 chrU 4984722 4984835 -5064202 - TART LINE telomeric -3816 10661 10549 6 623 3630 35 22 2 chrU 4984831 4985283 -5063754 - TART LINE telomeric -7 14470 14010 6 623 13982 32 13 1 chrU 4992103 4993755 -5055282 + NINJA_I LTR Pao 3099 4771 -1240 6 623 2506 42 3 25 chrU 4993880 4994196 -5054841 + NINJA_LTR LTR Pao 8 316 -1 6 623 4665 28 75 12 chrU 4994196 4994784 -5054253 - PROTOP_A DNA P -480 625 1 6 623 4384 57 2 15 chrU 4994784 4995372 -5053665 - TART LINE telomeric -13268 1209 630 6 623 1214 105 14 23 chrU 4995371 4995586 -5053451 - TAHRE LINE telomeric -12 10451 10239 6 623 1804 236 26 36 chrU 4995686 4996359 -5052678 + BATUMI_I LTR Pao 6304 7211 -703 6 623 4204 40 8 11 chrU 4995829 4996362 -5052675 - BATUMI_I LTR Pao -962 7001 6471 6 623 3931 72 0 11 chrU 4996357 4996893 -5052144 + BATUMI_I LTR Pao 7344 7873 -90 6 623 1755 43 4 41 chrU 4996940 4997182 -5051855 + BATUMI_LTR LTR Pao 32 264 -8 6 623 1458 220 120 48 chrU 4997189 4998012 -5051025 - Gypsy12_LTR LTR Gypsy -796 1540 615 6 623 1332 187 11 29 chrU 4998010 4998291 -5050746 - Gypsy12_LTR LTR Gypsy -2060 276 1 6 623 9822 86 62 8 chrU 4998291 4999892 -5049145 - Gypsy12_I LTR Gypsy 0 5546 3859 6 623 34 24 0 0 chrU 5008285 5008326 -5040711 + AT_rich Low_complexity Low_complexity 1 41 0 6 623 1715 111 13 60 chrU 5008511 5008828 -5040209 - Gypsy6A_LTR LTR Gypsy -118 302 1 6 623 2041 209 200 30 chrU 5008828 5009582 -5039455 - TAHRE LINE telomeric -463 10000 9119 6 623 2027 179 97 60 chrU 5009581 5010199 -5038838 - TAHRE LINE telomeric -2872 7591 6951 6 623 956 224 91 19 chrU 5010392 5010701 -5038336 + Copia_I LTR Copia 3997 4327 -266 6 623 47 0 0 0 chrU 5011348 5011395 -5037642 + AT_rich Low_complexity Low_complexity 1 47 0 6 623 291 318 65 30 chrU 5012427 5012657 -5036380 + Gypsy3_I LTR Gypsy 1179 1365 -4812 6 623 46 0 0 0 chrU 5014037 5014083 -5034954 + AT_rich Low_complexity Low_complexity 1 46 0 6 623 341 94 0 0 chrU 5014145 5014198 -5034839 - DM412 LTR Gypsy -100 6797 6745 6 623 192 40 0 0 chrU 5014313 5014338 -5034699 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6 623 6968 47 67 0 chrU 5014346 5015354 -5033683 - PROTOP_B DNA P -78 1075 1 6 623 399 169 57 33 chrU 5015354 5015476 -5033561 + TART LINE telomeric 10411 10535 -3942 6 623 903 219 214 22 chrU 5015458 5015827 -5033210 + TAHRE LINE telomeric 9769 10208 -255 6 623 1139 20 0 38 chrU 5015827 5015985 -5033052 + NINJA_LTR LTR Pao 1 152 -165 6 623 28 61 0 0 chrU 5016506 5016555 -5032482 + AT_rich Low_complexity Low_complexity 1 49 0 6 623 1729 162 60 68 chrU 5019459 5019955 -5029082 - TAHRE LINE telomeric -3021 7442 6951 6 623 883 238 91 19 chrU 5020155 5020464 -5028573 + Copia_I LTR Copia 3997 4327 -266 6 623 1523 65 0 42 chrU 5020680 5020920 -5028117 - BATUMI_LTR LTR Pao 0 272 43 6 623 1550 69 0 8 chrU 5021302 5021536 -5027501 - BATUMI_I LTR Pao -429 7534 7303 6 623 2235 47 9 47 chrU 5021559 5021897 -5027140 + BATUMI_I LTR Pao 6427 6751 -1212 6 623 18830 159 62 49 chrU 5021890 5025320 -5023717 - BATUMI_I LTR Pao -4489 3474 1 6 623 1390 54 73 43 chrU 5025320 5025554 -5023483 - BATUMI_LTR LTR Pao 0 272 32 6 623 311 143 62 38 chrU 5025580 5025660 -5023377 + Copia_I LTR Copia 4432 4513 -80 6 623 31 26 0 0 chrU 5026396 5026434 -5022603 + AT_rich Low_complexity Low_complexity 1 38 0 6 623 2078 166 229 28 chrU 5026437 5027936 -5021101 - TART LINE telomeric -3999 10478 8953 6 623 244 196 0 0 chrU 5028029 5028085 -5020952 + Copia_I LTR Copia 3606 3661 -932 6 623 775 232 142 20 chrU 5028092 5028387 -5020650 + Copia_I LTR Copia 3997 4327 -266 6 623 281 182 45 15 chrU 5028610 5028677 -5020360 + Copia_I LTR Copia 4445 4513 -80 6 623 1445 122 0 25 chrU 5028742 5028986 -5020051 + GTWIN_LTR LTR Gypsy 1 238 -257 6 623 31 26 0 0 chrU 5029941 5029979 -5019058 + AT_rich Low_complexity Low_complexity 1 38 0 6 623 2038 188 197 35 chrU 5030009 5030730 -5018307 - HETA LINE telomeric -171 5910 5073 6 623 1539 181 17 20 chrU 5030768 5031123 -5017914 - TAHRE LINE telomeric -3158 7305 6952 6 623 692 224 93 35 chrU 5031312 5031571 -5017466 + Copia_I LTR Copia 3997 4270 -323 6 623 298 298 30 8 chrU 5031885 5032017 -5017020 + Invader4_I LTR Gypsy 1 135 -2278 6 623 298 284 75 38 chrU 5032116 5032383 -5016654 + Invader1_I LTR Gypsy 950 1226 -1960 6 623 1219 305 8 8 chrU 5032435 5032914 -5016123 + Invader6_I LTR Gypsy 1426 1904 -2195 6 623 4358 19 0 2 chrU 5033019 5033551 -5015486 + DOC2_DM LINE Jockey 4263 4793 0 6 623 468 61 0 0 chrU 5034109 5034175 -5014862 - TRANSIB3 DNA Transib -2607 276 211 6 623 21 0 0 0 chrU 5034175 5034196 -5014841 + AT_rich Low_complexity Low_complexity 1 21 0 6 623 467 144 95 78 chrU 5034240 5034447 -5014590 - ACCORD2_LTR LTR Gypsy 0 215 1 6 623 4076 69 98 0 chrU 5034447 5035042 -5013995 + Baggins1 LINE LOA 3407 4059 -1394 6 623 7341 58 94 0 chrU 5035095 5036142 -5012895 + Baggins1 LINE LOA 4175 5319 -134 6 623 417 49 16 0 chrU 5036173 5036234 -5012803 - ACCORD2_I LTR Gypsy -1264 5948 5887 6 623 931 79 0 0 chrU 5036236 5036363 -5012674 - ACCORD2_I LTR Gypsy -1776 5436 5310 6 623 1297 102 123 4 chrU 5036355 5036582 -5012455 - ACCORD2_I LTR Gypsy -2351 4861 4608 6 623 4127 36 23 27 chrU 5036580 5037143 -5011894 + FW2_DM LINE Jockey 1117 1677 -2284 6 623 2147 146 10 25 chrU 5037143 5037551 -5011486 + GTWIN_LTR LTR Gypsy 1 402 -93 6 623 1882 58 43 21 chrU 5046635 5046916 -5002121 + FW2_DM LINE Jockey 1735 2021 -1940 6 623 2026 65 4 0 chrU 5046913 5047192 -5001845 - ACCORD2_I LTR Gypsy -4553 2659 2380 6 623 448 138 0 0 chrU 5047190 5047270 -5001767 - ACCORD2_I LTR Gypsy -4987 2225 2146 6 623 2010 141 46 29 chrU 5047332 5047748 -5001289 + Invader1_LTR LTR Gypsy 1 423 0 6 623 346 170 0 9 chrU 5047766 5047873 -5001164 - ACCORD2_I LTR Gypsy -5246 1966 1861 6 623 245 118 58 150 chrU 5047880 5048000 -5001037 - ACCORD2_I LTR Gypsy -5184 2028 1920 6 623 26262 62 40 2 chrU 5048202 5051795 -4997242 + MDG3_I LTR Gypsy 1261 4986 0 6 623 1878 41 3 83 chrU 5051795 5052085 -4996952 + MDG3_LTR LTR Gypsy 1 267 0 6 623 27 0 0 0 chrU 5052085 5052112 -4996925 + AT_rich Low_complexity Low_complexity 1 27 0 6 623 259 137 14 14 chrU 5053533 5053607 -4995430 + (TTATA)n Simple_repeat Simple_repeat 2 75 0 6 623 7002 179 59 63 chrU 5060106 5061731 -4987306 + IDEFIX_I LTR Gypsy 1 1618 -4010 6 623 1877 129 295 7 chrU 5061741 5062604 -4986433 + IDEFIX_I LTR Gypsy 1882 2994 -2634 6 623 1832 147 145 3 chrU 5062605 5062970 -4986067 + IDEFIX_I LTR Gypsy 4196 4612 -1016 6 623 3919 66 27 14 chrU 5062968 5063487 -4985550 - G5A_DM LINE Jockey -80 2761 2236 6 623 2658 312 19 26 chrU 5070172 5072290 -4976747 + ZAM_I LTR Gypsy 2252 4527 -2963 6 623 31 78 0 28 chrU 5075343 5075449 -4973588 + AT_rich Low_complexity Low_complexity 1 103 0 6 623 34 42 0 0 chrU 5075685 5075733 -4973304 + AT_rich Low_complexity Low_complexity 1 48 0 6 623 22 0 0 0 chrU 5075827 5075849 -4973188 + AT_rich Low_complexity Low_complexity 1 22 0 6 623 24 32 0 0 chrU 5076395 5076426 -4972611 + AT_rich Low_complexity Low_complexity 1 31 0 6 623 2294 137 194 23 chrU 5076658 5077382 -4971655 - MICROPIA_I LTR Gypsy -1083 3393 2546 6 623 1777 95 81 7 chrU 5077372 5077657 -4971380 - MICROPIA_I LTR Gypsy -2361 2115 1810 6 623 2391 95 97 5 chrU 5077662 5078033 -4971004 - MICROPIA_I LTR Gypsy -2799 1677 1273 6 623 1048 110 152 3 chrU 5078031 5078314 -4970723 - MICROPIA_I LTR Gypsy -3912 564 240 6 623 21 0 0 0 chrU 5078616 5078637 -4970400 + AT_rich Low_complexity Low_complexity 1 21 0 6 623 5163 77 107 0 chrU 5080652 5081407 -4967630 + DMRT1C LINE R1 4606 5441 -2 6 623 784 170 0 0 chrU 5081406 5081547 -4967490 + IDEFIX_I LTR Gypsy 2905 3045 -2583 6 623 230 200 0 0 chrU 5081543 5081598 -4967439 + IDEFIX_I LTR Gypsy 3301 3355 -2273 6 623 4859 156 107 5 chrU 5081604 5082584 -4966453 + IDEFIX_I LTR Gypsy 4178 5257 -371 6 623 617 47 45 23 chrU 5082597 5082685 -4966352 - DNAREP1_DM LINE Penelope -5 589 500 6 623 1582 14 292 0 chrU 5084563 5084779 -4964258 - MICROPIA_I LTR Gypsy -4197 279 1 6 623 4078 8 0 61 chrU 5084779 5085286 -4963751 - MICROPIA_LTR LTR Gypsy 0 476 1 6 623 3538 107 38 47 chrU 5085290 5085926 -4963111 - DM412 LTR Gypsy -5964 933 304 6 623 3233 44 137 0 chrU 5086000 5086431 -4962606 + G5_DM LINE Jockey 410 899 -3957 6 623 4196 27 191 0 chrU 5086424 5087143 -4961894 + G5_DM LINE Jockey 1230 2085 -2771 6 623 4474 30 0 2 chrU 5087139 5087667 -4961370 + G5_DM LINE Jockey 2435 2961 -1895 6 623 614 301 23 23 chrU 5094594 5095014 -4954023 - ROVER-I_DM LTR Gypsy -3858 3154 2320 6 623 428 346 33 50 chrU 5095552 5095910 -4953127 - ROVER-I_DM LTR Gypsy -5255 1757 1355 6 623 27 29 0 0 chrU 5096301 5096335 -4952702 + AT_rich Low_complexity Low_complexity 1 34 0 6 623 46 0 0 0 chrU 5097062 5097108 -4951929 + AT_rich Low_complexity Low_complexity 1 46 0 6 623 5034 212 40 8 chrU 5097543 5098336 -4950701 + G5_DM LINE Jockey 3445 4263 -593 6 623 857 79 0 0 chrU 5098347 5098474 -4950563 + G5_DM LINE Jockey 4730 4856 0 6 623 2344 144 47 11 chrU 5098474 5098924 -4950113 - DM412B_LTR LTR Gypsy -105 466 1 6 623 2097 92 18 8 chrU 5098924 5099411 -4949626 + IDEFIX_I LTR Gypsy 2409 2996 -2632 6 623 2002 85 3 0 chrU 5099403 5099685 -4949352 - DM412 LTR Gypsy -2763 4134 3852 6 623 5434 89 127 2 chrU 5099680 5101491 -4947546 - DM412 LTR Gypsy -3211 3686 1649 6 623 5782 36 3 1 chrU 5103686 5104428 -4944609 + IDEFIX_I LTR Gypsy 4885 5627 -1 6 623 4499 51 14 2 chrU 5104429 5105016 -4944021 + IDEFIX_LTR LTR Gypsy 1 594 0 6 623 687 129 61 7 chrU 5105016 5105164 -4943873 + ACCORD2_I LTR Gypsy 1561 1716 -5496 6 623 30 0 0 0 chrU 5105164 5105194 -4943843 + AT_rich Low_complexity Low_complexity 1 30 0 6 623 1846 109 10 3 chrU 5105194 5105488 -4943549 + ACCORD2_I LTR Gypsy 2024 2319 -4893 6 623 4707 72 72 19 chrU 5105508 5106231 -4942806 + ACCORD2_I LTR Gypsy 2832 3592 -3620 6 623 4527 105 24 2 chrU 5106230 5106986 -4942051 + ACCORD2_I LTR Gypsy 3882 4455 -2757 6 623 309 48 0 0 chrU 5106989 5107031 -4942006 + ACCORD2_I LTR Gypsy 4642 4683 -2529 6 623 433 52 0 0 chrU 5107031 5107089 -4941948 + ACCORD2_I LTR Gypsy 4625 4682 -2530 6 623 5135 67 9 3 chrU 5107057 5107731 -4941306 + ACCORD2_I LTR Gypsy 4832 5509 -1703 6 623 813 73 0 0 chrU 5108098 5108208 -4940829 + ACCORD2_I LTR Gypsy 5964 6073 -1139 6 623 1098 62 129 4 chrU 5108209 5108472 -4940565 + ACCORD2_I LTR Gypsy 6513 6808 -404 6 623 767 159 65 35 chrU 5108526 5108695 -4940342 + ACCORD2_LTR LTR Gypsy 39 212 -3 6 623 27 29 0 0 chrU 5109033 5109067 -4939970 + AT_rich Low_complexity Low_complexity 1 34 0 6 623 4254 54 59 0 chrU 5109764 5110323 -4938714 + DOC3_DM LINE Jockey 1836 2427 -2313 6 623 3499 48 271 11 chrU 5110322 5110886 -4938151 + DOC3_DM LINE Jockey 2743 3453 -1287 6 623 1387 63 0 0 chrU 5110887 5111062 -4937975 + DOC3_DM LINE Jockey 4152 4326 -414 6 623 1447 179 45 60 chrU 5111066 5111478 -4937559 + TAHRE LINE telomeric 6847 7162 -3301 6 624 24821 38 37 2 chrU 5118382 5121536 -4927501 - IDEFIX_I LTR Gypsy -52 5576 2315 6 624 323 334 29 29 chrU 5121737 5121981 -4927056 - Gypsy6_I LTR Gypsy -5383 1629 1437 6 624 47 0 0 0 chrU 5122944 5122991 -4926046 + AT_rich Low_complexity Low_complexity 1 47 0 6 624 526 89 187 11 chrU 5123476 5123564 -4925473 - BATUMI_I LTR Pao -858 7105 7002 6 624 1579 79 0 9 chrU 5123564 5123780 -4925257 - BATUMI_I LTR Pao 0 7963 7750 6 624 13526 181 48 37 chrU 5132000 5134236 -4914801 - BATUMI_I LTR Pao -5703 2260 1 6 624 1812 46 8 29 chrU 5134236 5134482 -4914555 - BATUMI_LTR LTR Pao 0 272 32 6 624 5112 39 0 5 chrU 5134503 5135144 -4913893 - IDEFIX_I LTR Gypsy -1972 3656 3019 6 624 2912 95 16 11 chrU 5135244 5136497 -4912540 + DMSAT6 Satellite Satellite 1 1259 -18 6 624 2649 108 14 12 chrU 5136921 5138445 -4910592 + DMSAT6 Satellite Satellite 1 1525 -97 6 624 2810 164 15 20 chrU 5145322 5149006 -4900031 + DMSAT6 Satellite Satellite 1 3667 -74 6 624 10488 5 17 0 chrU 5149114 5150271 -4898766 - DMRT1B LINE R1 -399 4784 3608 6 624 444 183 282 0 chrU 5157017 5157155 -4891882 - MDG1_I LTR Gypsy -6404 192 16 6 624 8356 44 120 39 chrU 5157429 5158955 -4890082 - ROOA_I LTR Pao -5199 1650 1 6 624 1425 45 63 34 chrU 5158955 5159162 -4889875 - ROOA_LTR LTR Pao 0 386 174 6 624 4820 112 60 34 chrU 5159832 5160869 -4888168 + STALKER4_I LTR Gypsy 319 1441 -5089 6 624 824 36 0 9 chrU 5161020 5161133 -4887904 + STALKER4_I LTR Gypsy 1426 1537 -4993 6 624 854 189 47 149 chrU 5161298 5161701 -4887336 - ROVER-I_DM LTR Gypsy -6222 362 1 6 624 2095 86 52 41 chrU 5161701 5162064 -4886973 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 624 60 0 0 0 chrU 5162564 5162624 -4886413 + AT_rich Low_complexity Low_complexity 1 60 0 6 624 579 49 12 0 chrU 5169260 5169341 -4879696 - IDEFIX_LTR LTR Gypsy -512 82 1 6 624 270 100 0 0 chrU 5169309 5169349 -4879688 + BARI1 DNA Tc1 3 42 -1708 6 624 21246 58 36 13 chrU 5169353 5172282 -4876755 + DM412 LTR Gypsy 3729 6727 -170 6 624 2171 157 28 12 chrU 5172294 5172720 -4876317 + DM412B_LTR LTR Gypsy 33 465 -106 6 624 5242 66 89 7 chrU 5172735 5174078 -4874959 - IDEFIX_I LTR Gypsy -3217 2411 959 6 624 1854 67 32 0 chrU 5174085 5174338 -4874699 - IDEFIX_I LTR Gypsy -4808 820 560 6 624 4121 55 0 0 chrU 5174366 5174890 -4874147 + DM412 LTR Gypsy 5666 6189 -708 6 624 1814 69 92 0 chrU 5174883 5175144 -4873893 - IDEFIX_I LTR Gypsy -4850 778 494 6 624 3609 32 5 2 chrU 5182103 5182542 -4866495 + QUASIMODO_LTR LTR Gypsy 219 658 0 6 624 747 127 0 0 chrU 5182551 5182661 -4866376 - HMSBEAGLE_I LTR Gypsy -1817 4712 4603 6 624 7349 110 21 0 chrU 5182661 5183724 -4865313 - HMSBEAGLE_I LTR Gypsy -1344 5185 4101 6 624 1326 109 0 0 chrU 5183723 5183906 -4865131 - HMSBEAGLE_I LTR Gypsy -2564 3965 3783 6 624 309 178 27 14 chrU 5183906 5183980 -4865057 - BS LINE Jockey -2802 2324 2250 6 624 331 276 0 0 chrU 5183995 5184093 -4864944 - BS LINE Jockey -2952 2174 2077 6 624 453 248 0 0 chrU 5184276 5184381 -4864656 - BS LINE Jockey -3024 2102 1998 6 624 922 279 0 0 chrU 5184745 5184999 -4864038 - BS LINE Jockey -3543 1583 1330 6 624 317 215 165 23 chrU 5184994 5185127 -4863910 - BS LINE Jockey -3985 1141 990 6 624 547 223 8 15 chrU 5185143 5185275 -4863762 - DMLTR5 LTR Gypsy 0 266 136 6 624 239 88 0 0 chrU 5185271 5185305 -4863732 - HMSBEAGLE_I LTR Gypsy -92 6437 6404 6 624 762 169 46 46 chrU 5185929 5186140 -4862897 - DNAREP1_DM LINE Penelope -325 269 59 6 624 3341 48 10 5 chrU 5186140 5186558 -4862479 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 624 21 36 0 0 chrU 5186847 5186875 -4862162 + AT_rich Low_complexity Low_complexity 1 28 0 6 624 640 296 62 53 chrU 5187082 5187625 -4861412 + Gypsy2_I LTR Gypsy 1392 1925 -4252 6 624 1251 241 186 0 chrU 5187611 5188106 -4860931 + Gypsy2_I LTR Gypsy 1715 2596 -4416 6 624 589 289 0 0 chrU 5188098 5188257 -4860780 + Gypsy3_I LTR Gypsy 2607 2765 -3412 6 624 1914 67 143 7 chrU 5188261 5188562 -4860475 + PROTOP DNA P 3133 3474 -1006 6 624 1150 97 138 5 chrU 5188576 5188794 -4860243 + PROTOP DNA P 3668 3914 -566 6 624 1532 132 69 5 chrU 5188802 5189238 -4859799 - DNAREP1_DM LINE Penelope -262 332 3 6 624 21 0 0 0 chrU 5189609 5189630 -4859407 + AT_rich Low_complexity Low_complexity 1 21 0 6 624 498 190 102 18 chrU 5189744 5189910 -4859127 - DMCR1A LINE CR1 -41 4429 4250 6 624 3035 35 21 3 chrU 5190010 5190388 -4858649 - BATUMI_I LTR Pao -7578 385 1 6 624 1742 62 4 28 chrU 5190388 5190635 -4858402 - BATUMI_LTR LTR Pao 0 272 32 6 624 4421 10 0 0 chrU 5190656 5191171 -4857866 + STALKER4_I LTR Gypsy 5578 6092 -438 6 624 744 184 41 61 chrU 5197709 5197906 -4851131 - Gypsy5_LTR LTR Gypsy -235 195 3 6 624 4171 55 51 2 chrU 5197957 5198523 -4850514 - IDEFIX_LTR LTR Gypsy 0 594 1 6 624 7046 160 39 12 chrU 5198542 5200689 -4848348 - IDEFIX_I LTR Gypsy -20 5943 3342 6 624 1006 57 24 22 chrU 5200692 5200852 -4848185 - BATUMI_LTR LTR Pao -105 167 38 6 624 4910 75 0 5 chrU 5200852 5201520 -4847517 - BATUMI_I LTR Pao -1 7962 7298 6 624 2886 36 274 24 chrU 5201538 5201998 -4847039 + BATUMI_I LTR Pao 6427 7001 -962 6 624 5118 51 0 11 chrU 5202024 5202659 -4846378 - BATUMI_I LTR Pao -1543 6420 5793 6 624 1320 39 0 0 chrU 5202656 5202812 -4846225 - BATUMI_I LTR Pao -2355 5608 5453 6 624 4180 8 0 0 chrU 5202912 5203382 -4845655 + IVK_DM LINE I 3006 3475 -1927 6 624 4943 7 0 0 chrU 5203387 5203939 -4845098 + IVK_DM LINE I 3901 4452 -950 6 624 21 36 0 0 chrU 5211292 5211320 -4837717 + AT_rich Low_complexity Low_complexity 1 28 0 6 624 192 40 0 0 chrU 5211320 5211345 -4837692 + (TTA)n Simple_repeat Simple_repeat 1 25 0 6 624 36 0 0 0 chrU 5211463 5211499 -4837538 + AT_rich Low_complexity Low_complexity 1 36 0 6 624 1591 111 4 4 chrU 5211751 5211995 -4837042 + BS2 LINE Jockey 14 257 -4464 6 624 1934 36 12 8 chrU 5211994 5212248 -4836789 - G5_DM LINE Jockey 0 4856 4602 6 624 2858 53 59 3 chrU 5212245 5212620 -4836417 - G5_DM LINE Jockey -489 4367 3972 6 624 21 0 0 0 chrU 5212651 5212672 -4836365 + AT_rich Low_complexity Low_complexity 1 21 0 6 624 62 26 0 0 chrU 5213025 5213101 -4835936 + AT_rich Low_complexity Low_complexity 1 76 0 6 624 244 212 197 0 chrU 5213524 5213590 -4835447 - PROTOP_B DNA P -967 186 108 6 624 1037 127 24 0 chrU 5213732 5213898 -4835139 + DNAREP1_DM LINE Penelope 6 175 -419 6 624 699 157 98 27 chrU 5213938 5214121 -4834916 + DNAREP1_DM LINE Penelope 120 315 -279 6 624 419 157 188 73 chrU 5214123 5214315 -4834722 - DNAREP1_DM LINE Penelope -380 214 1 6 624 49 43 0 0 chrU 5214406 5214476 -4834561 + AT_rich Low_complexity Low_complexity 1 70 0 6 624 34 72 0 0 chrU 5214879 5214948 -4834089 + AT_rich Low_complexity Low_complexity 1 69 0 6 624 3912 0 0 0 chrU 5215532 5215960 -4833077 + NOMAD_LTR LTR Gypsy 1 428 -90 6 624 4841 0 0 0 chrU 5222891 5223409 -4825628 + NOMAD_LTR LTR Gypsy 1 518 0 6 624 2737 94 28 15 chrU 5224086 5227040 -4821997 + DMSAT6 Satellite Satellite 1 2992 -26 6 624 2739 105 17 34 chrU 5234103 5236517 -4812520 + DMSAT6 Satellite Satellite 1 2372 -88 6 624 2726 96 15 17 chrU 5236534 5237587 -4811450 + DMSAT6 Satellite Satellite 1 1051 0 6 624 825 50 33 25 chrU 5237687 5237809 -4811228 - Gypsy12_I LTR Gypsy -5423 123 1 6 624 7089 189 53 61 chrU 5237809 5239701 -4809336 - Gypsy12_LTR LTR Gypsy 0 2336 460 6 624 955 147 49 12 chrU 5240154 5240392 -4808645 - DNAREP1_DM LINE Penelope -151 443 70 6 625 3601 123 29 4 chrU 5248221 5248836 -4800201 - DMRT1C LINE R1 -1020 4423 3743 6 625 37 39 0 0 chrU 5249384 5249435 -4799602 + AT_rich Low_complexity Low_complexity 1 51 0 6 625 1455 150 73 17 chrU 5249475 5249885 -4799152 + DNAREP1_DM LINE Penelope 1 316 -278 6 625 515 159 156 86 chrU 5249954 5250140 -4798897 - DM297_I LTR Gypsy -2601 3566 3368 6 625 1145 162 15 0 chrU 5250177 5250381 -4798656 - DM297_I LTR Gypsy -3428 2739 2533 6 625 1935 131 35 9 chrU 5250379 5250695 -4798342 - DMRT1C LINE R1 -154 5289 4966 6 625 543 96 0 0 chrU 5250693 5250766 -4798271 - DMRT1C LINE R1 -701 4742 4670 6 625 685 298 23 70 chrU 5250867 5251513 -4797524 + GTWIN_I LTR Gypsy 3045 3538 -2883 6 625 257 281 56 56 chrU 5252019 5252181 -4796856 + GTWIN_I LTR Gypsy 4123 4284 -2137 6 625 261 159 73 73 chrU 5252359 5252427 -4796610 + Gypsy4_I LTR Gypsy 4324 4391 -1897 6 625 21 36 0 0 chrU 5252520 5252548 -4796489 + AT_rich Low_complexity Low_complexity 1 28 0 6 625 25 0 0 0 chrU 5252793 5252818 -4796219 + AT_rich Low_complexity Low_complexity 1 25 0 6 625 49 84 0 0 chrU 5253966 5254085 -4794952 + AT_rich Low_complexity Low_complexity 1 119 0 6 625 920 48 8 0 chrU 5254398 5254522 -4794515 - DMCR1A LINE CR1 -146 4324 4200 6 625 2336 58 0 0 chrU 5254513 5254804 -4794233 - DMCR1A LINE CR1 -546 3924 3634 6 625 962 46 322 0 chrU 5262894 5263046 -4785991 + DMCR1A LINE CR1 1078 1278 -3192 6 625 7808 168 52 2 chrU 5263051 5264707 -4784330 - HMSBEAGLE_I LTR Gypsy -2145 4384 2647 6 625 1835 138 14 0 chrU 5264718 5265008 -4784029 - HMSBEAGLE_I LTR Gypsy -4250 2279 1986 6 625 1716 126 214 4 chrU 5265014 5265514 -4783523 - HMSBEAGLE_I LTR Gypsy -4661 1868 1236 6 625 766 251 4 100 chrU 5265520 5265790 -4783247 - DMLTR5 LTR Gypsy -22 244 1 6 625 357 59 78 0 chrU 5265796 5265847 -4783190 + DMCR1A LINE CR1 1629 1683 -2787 6 625 4764 26 2 2 chrU 5265949 5266521 -4782516 + PROTOP_A DNA P 534 1105 0 6 625 6911 56 100 1 chrU 5266521 5267464 -4781573 + MDG1_I LTR Gypsy 2854 3889 -2707 6 625 34 72 0 0 chrU 5267849 5267918 -4781119 + AT_rich Low_complexity Low_complexity 1 69 0 6 625 2389 64 113 0 chrU 5268068 5268413 -4780624 + DMTOM1_LTR LTR Gypsy 9 392 -18 6 625 543 200 21 140 chrU 5268415 5268700 -4780337 + TOM_I LTR Gypsy 6 256 -5856 6 625 473 277 13 7 chrU 5268705 5268854 -4780183 + DM297_I LTR Gypsy 637 786 -5381 6 625 1812 224 30 24 chrU 5268860 5269359 -4779678 - DM297_I LTR Gypsy -1291 4876 4375 6 625 1161 269 3 3 chrU 5269413 5269715 -4779322 + TOM_I LTR Gypsy 667 968 -5144 6 625 2062 35 3 90 chrU 5269717 5270027 -4779010 + BATUMI_I LTR Pao 7002 7284 -679 6 625 1742 70 4 36 chrU 5270027 5270277 -4778760 + BATUMI_I LTR Pao 1 242 -7721 6 625 3577 212 44 10 chrU 5278604 5279414 -4769623 + TOM_I LTR Gypsy 2364 3201 -2911 6 625 723 217 45 61 chrU 5279508 5279753 -4769284 - Gypsy_LTR LTR Gypsy -213 269 29 6 625 2111 200 9 11 chrU 5279786 5280235 -4768802 + DM297_I LTR Gypsy 4224 4671 -1496 6 625 6299 6 0 0 chrU 5280347 5281055 -4767982 - G2_DM LINE Jockey -2391 711 4 6 625 600 203 54 103 chrU 5281466 5281708 -4767329 - ROVER-I_DM LTR Gypsy -6354 230 1 6 625 527 82 0 0 chrU 5281794 5281864 -4767173 - ROVER-LTR_DM LTR Gypsy -220 147 78 6 625 2991 27 0 77 chrU 5281864 5282269 -4766768 - MICROPIA_LTR LTR Gypsy 0 476 103 6 625 3853 5 2 0 chrU 5282369 5282799 -4766238 - MICROPIA_I LTR Gypsy -2914 1562 1132 6 625 3121 14 11 0 chrU 5282801 5283158 -4765879 - MICROPIA_I LTR Gypsy -4115 361 1 6 625 2510 16 0 89 chrU 5283158 5283506 -4765531 - MICROPIA_LTR LTR Gypsy 0 476 160 6 625 10992 15 28 0 chrU 5284727 5286035 -4763002 + ACCORD2_I LTR Gypsy 3474 4817 -2395 6 625 2769 30 6 0 chrU 5286035 5286367 -4762670 + ACCORD2_I LTR Gypsy 6870 7203 -9 6 625 1811 14 5 18 chrU 5286367 5286585 -4762452 + ACCORD2_LTR LTR Gypsy 1 215 0 6 625 3479 116 52 4 chrU 5286585 5287368 -4761669 - DMRT1C LINE R1 -829 4614 3743 6 625 218 215 67 0 chrU 5288142 5288291 -4760746 + (TA)n Simple_repeat Simple_repeat 1 159 0 6 625 207 105 53 0 chrU 5288308 5288365 -4760672 + (TA)n Simple_repeat Simple_repeat 1 60 0 6 625 76 39 0 0 chrU 5288366 5288470 -4760567 + AT_rich Low_complexity Low_complexity 1 104 0 6 625 216 122 0 0 chrU 5288470 5288511 -4760526 + (A)n Simple_repeat Simple_repeat 1 41 0 6 625 26 64 0 0 chrU 5288596 5288643 -4760394 + AT_rich Low_complexity Low_complexity 1 47 0 6 625 26 74 0 0 chrU 5288760 5288814 -4760223 + AT_rich Low_complexity Low_complexity 1 54 0 6 625 38 51 0 0 chrU 5288974 5289033 -4760004 + AT_rich Low_complexity Low_complexity 1 59 0 6 625 33 43 0 0 chrU 5289176 5289223 -4759814 + AT_rich Low_complexity Low_complexity 1 47 0 6 625 204 190 0 33 chrU 5289361 5289421 -4759616 + T-rich Low_complexity Low_complexity 1 58 0 6 625 25 99 0 0 chrU 5289421 5289502 -4759535 + AT_rich Low_complexity Low_complexity 1 81 0 6 625 24 85 0 0 chrU 5289577 5289636 -4759401 + AT_rich Low_complexity Low_complexity 1 59 0 6 625 62 79 0 0 chrU 5289653 5289792 -4759245 + AT_rich Low_complexity Low_complexity 1 139 0 6 625 22 0 0 0 chrU 5290179 5290201 -4758836 + AT_rich Low_complexity Low_complexity 1 22 0 6 625 34 0 0 0 chrU 5291725 5291759 -4757278 + AT_rich Low_complexity Low_complexity 1 34 0 6 625 32 0 0 0 chrU 5292404 5292436 -4756601 + AT_rich Low_complexity Low_complexity 1 32 0 6 625 207 162 43 29 chrU 5292456 5292526 -4756511 + (TTA)n Simple_repeat Simple_repeat 3 73 0 6 625 31 44 0 0 chrU 5292797 5292842 -4756195 + AT_rich Low_complexity Low_complexity 1 45 0 6 625 26 64 0 0 chrU 5294047 5294094 -4754943 + AT_rich Low_complexity Low_complexity 1 47 0 6 625 22 88 0 0 chrU 5294113 5294170 -4754867 + AT_rich Low_complexity Low_complexity 1 57 0 6 625 27 29 0 0 chrU 5294301 5294335 -4754702 + AT_rich Low_complexity Low_complexity 1 34 0 6 625 44 63 0 0 chrU 5294361 5294440 -4754597 + AT_rich Low_complexity Low_complexity 1 79 0 6 625 25 0 0 0 chrU 5294485 5294510 -4754527 + AT_rich Low_complexity Low_complexity 1 25 0 6 625 29 47 0 0 chrU 5294822 5294865 -4754172 + AT_rich Low_complexity Low_complexity 1 43 0 6 625 180 170 0 0 chrU 5294935 5294988 -4754049 + A-rich Low_complexity Low_complexity 6 58 0 6 625 22 88 0 0 chrU 5295001 5295058 -4753979 + AT_rich Low_complexity Low_complexity 1 57 0 6 625 41 48 0 0 chrU 5295190 5295252 -4753785 + AT_rich Low_complexity Low_complexity 1 62 0 6 625 21 36 0 0 chrU 5296139 5296167 -4752870 + AT_rich Low_complexity Low_complexity 1 28 0 6 625 21 82 0 0 chrU 5296348 5296397 -4752640 + AT_rich Low_complexity Low_complexity 1 49 0 6 625 21 82 0 0 chrU 5296556 5296605 -4752432 + AT_rich Low_complexity Low_complexity 1 49 0 6 625 35 71 0 0 chrU 5296710 5296780 -4752257 + AT_rich Low_complexity Low_complexity 1 70 0 6 625 46 95 0 0 chrU 5297516 5297653 -4751384 + AT_rich Low_complexity Low_complexity 1 137 0 6 625 86 98 0 0 chrU 5297724 5297999 -4751038 + AT_rich Low_complexity Low_complexity 1 275 0 6 625 98 90 0 7 chrU 5297776 5298078 -4750959 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 38 22 0 0 chrU 5298036 5298081 -4750956 + AT_rich Low_complexity Low_complexity 1 45 0 6 625 57 47 0 0 chrU 5298171 5298256 -4750781 + AT_rich Low_complexity Low_complexity 1 85 0 6 625 22 99 0 0 chrU 5298314 5298385 -4750652 + AT_rich Low_complexity Low_complexity 1 71 0 6 625 21 0 0 0 chrU 5298464 5298485 -4750552 + AT_rich Low_complexity Low_complexity 1 21 0 6 625 22 56 0 0 chrU 5298495 5298531 -4750506 + AT_rich Low_complexity Low_complexity 1 36 0 6 625 25 0 0 0 chrU 5298649 5298674 -4750363 + AT_rich Low_complexity Low_complexity 1 25 0 6 625 93 94 0 0 chrU 5298723 5298998 -4750039 + AT_rich Low_complexity Low_complexity 1 275 0 6 625 23 68 0 0 chrU 5299720 5299764 -4749273 + AT_rich Low_complexity Low_complexity 1 44 0 6 625 36 74 0 27 chrU 5300209 5300320 -4748717 + AT_rich Low_complexity Low_complexity 1 108 0 6 625 31 58 0 0 chrU 5300381 5300433 -4748604 + AT_rich Low_complexity Low_complexity 1 52 0 6 625 205 225 7 72 chrU 5300605 5300744 -4748293 + A-rich Low_complexity Low_complexity 4 133 0 6 625 34 24 0 0 chrU 5301260 5301301 -4747736 + AT_rich Low_complexity Low_complexity 1 41 0 6 625 69 46 0 30 chrU 5301552 5301686 -4747351 + AT_rich Low_complexity Low_complexity 1 130 0 6 625 24 32 0 0 chrU 5301725 5301756 -4747281 + AT_rich Low_complexity Low_complexity 1 31 0 6 625 115 68 0 0 chrU 5301941 5302161 -4746876 + AT_rich Low_complexity Low_complexity 1 220 0 6 625 203 193 18 0 chrU 5302182 5302239 -4746798 + (TTAA)n Simple_repeat Simple_repeat 1 58 0 6 625 86 100 0 0 chrU 5302291 5302580 -4746457 + AT_rich Low_complexity Low_complexity 1 289 0 6 625 27 49 0 0 chrU 5302799 5302840 -4746197 + AT_rich Low_complexity Low_complexity 1 41 0 6 625 36 40 0 0 chrU 5302881 5302931 -4746106 + AT_rich Low_complexity Low_complexity 1 50 0 6 625 81 58 0 0 chrU 5303113 5303250 -4745787 + AT_rich Low_complexity Low_complexity 1 137 0 6 625 171 44 0 20 chrU 5303307 5303607 -4745430 + AT_rich Low_complexity Low_complexity 1 294 0 6 625 205 37 0 10 chrU 5303352 5303653 -4745384 + AT_rich Low_complexity Low_complexity 1 298 0 6 625 215 31 0 10 chrU 5303385 5303682 -4745355 + AT_rich Low_complexity Low_complexity 1 294 0 6 625 257 20 0 0 chrU 5303438 5303737 -4745300 + AT_rich Low_complexity Low_complexity 1 299 0 6 625 258 20 0 0 chrU 5303522 5303822 -4745215 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 237 27 0 0 chrU 5303547 5303840 -4745197 + AT_rich Low_complexity Low_complexity 1 293 0 6 625 230 33 0 0 chrU 5303565 5303865 -4745172 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 223 37 0 0 chrU 5303587 5303887 -4745150 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 223 37 0 0 chrU 5303627 5303927 -4745110 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 223 37 0 0 chrU 5303643 5303943 -4745094 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 223 37 0 0 chrU 5303677 5303977 -4745060 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 214 40 0 0 chrU 5303697 5303995 -4745042 + AT_rich Low_complexity Low_complexity 1 298 0 6 625 209 43 0 0 chrU 5303723 5304023 -4745014 + AT_rich Low_complexity Low_complexity 1 300 0 6 625 327 186 13 60 chrU 5304023 5304162 -4744875 + (TAAA)n Simple_repeat Simple_repeat 4 136 0 6 625 180 125 0 0 chrU 5304162 5304194 -4744843 + (TA)n Simple_repeat Simple_repeat 1 32 0 6 625 327 186 13 60 chrU 5304194 5304203 -4744834 + (TAAA)n Simple_repeat Simple_repeat 1 9 0 6 625 185 25 0 4 chrU 5304213 5304397 -4744640 + AT_rich Low_complexity Low_complexity 1 184 0 6 625 219 36 0 0 chrU 5304397 5304425 -4744612 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 625 169 41 0 23 chrU 5304425 5304500 -4744537 + AT_rich Low_complexity Low_complexity 1 75 0 6 625 327 25 0 0 chrU 5304500 5304540 -4744497 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 625 71 58 0 34 chrU 5304540 5304647 -4744390 + AT_rich Low_complexity Low_complexity 1 102 0 6 625 210 214 19 49 chrU 5304654 5304816 -4744221 + (TATAA)n Simple_repeat Simple_repeat 1 157 0 6 625 180 0 0 0 chrU 5304852 5304872 -4744165 + (TA)n Simple_repeat Simple_repeat 1 20 0 6 625 161 38 0 8 chrU 5304905 5305092 -4743945 + AT_rich Low_complexity Low_complexity 1 186 0 6 625 372 59 0 0 chrU 5305092 5305143 -4743894 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 625 147 50 0 29 chrU 5305143 5305218 -4743819 + AT_rich Low_complexity Low_complexity 1 74 0 6 625 231 36 0 0 chrU 5305218 5305246 -4743791 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 625 147 50 0 29 chrU 5305246 5305423 -4743614 + AT_rich Low_complexity Low_complexity 1 172 0 6 625 161 38 0 8 chrU 5305278 5305465 -4743572 + AT_rich Low_complexity Low_complexity 1 186 0 6 625 321 47 0 0 chrU 5305465 5305508 -4743529 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 625 147 50 0 29 chrU 5305508 5305583 -4743454 + AT_rich Low_complexity Low_complexity 1 74 0 6 625 321 26 0 0 chrU 5305583 5305621 -4743416 + (TA)n Simple_repeat Simple_repeat 1 38 0 6 625 143 51 0 30 chrU 5305621 5305742 -4743295 + AT_rich Low_complexity Low_complexity 1 116 0 6 625 67 42 0 0 chrU 5305654 5305749 -4743288 + AT_rich Low_complexity Low_complexity 1 95 0 6 625 1700 83 31 16 chrU 5305913 5306170 -4742867 - ROVER-LTR_DM LTR Gypsy -106 261 1 6 625 1957 69 399 10 chrU 5306302 5306771 -4742266 - MDG1_I LTR Gypsy -101 6796 5960 6 625 467 57 0 14 chrU 5306771 5306842 -4742195 - MDG1_I LTR Gypsy -870 5726 5657 6 625 3937 40 8 4 chrU 5307018 5307524 -4741513 - CIRCE LINE Composite -1381 4975 4468 6 625 12116 4 1 1 chrU 5307504 5308864 -4740173 - FW_DM LINE Jockey -2 4690 3331 6 625 789 63 18 9 chrU 5315346 5315458 -4733579 - CIRCE LINE Composite -5271 1085 973 6 625 7494 33 29 33 chrU 5315600 5316574 -4732463 - CIRCE LINE Composite -5386 970 1 6 625 7749 46 12 33 chrU 5316574 5318034 -4731003 - CIRCE LINE Composite 0 6356 4981 6 625 1430 40 0 0 chrU 5318394 5318568 -4730469 - CIRCE LINE Composite -1376 4980 4807 6 625 768 33 0 0 chrU 5318566 5318658 -4730379 - MDG1_I LTR Gypsy -2300 4296 4205 6 625 970 34 0 8 chrU 5318653 5318773 -4730264 - CIRCE LINE Composite -1431 4925 4807 6 625 6046 37 39 1 chrU 5318771 5319520 -4729517 - MDG1_I LTR Gypsy -2300 4296 3520 6 625 21 0 0 0 chrU 5319520 5319541 -4729496 + AT_rich Low_complexity Low_complexity 1 21 0 6 625 12737 67 51 4 chrU 5319543 5321335 -4727702 - MDG1_I LTR Gypsy -3503 3093 1217 6 625 454 349 37 86 chrU 5321736 5322306 -4726731 + MICROPIA_I LTR Gypsy 493 1034 -3442 6 625 683 311 17 17 chrU 5323072 5323373 -4725664 + Copia_I LTR Copia 436 736 -3857 6 625 2393 4 0 0 chrU 5323696 5323972 -4725065 + Copia_LTR LTR Copia 1 276 0 6 625 244 0 0 0 chrU 5323972 5324006 -4725031 + Copia_LTR LTR Copia 243 276 0 6 625 590 0 0 0 chrU 5324006 5324073 -4724964 + Copia_I LTR Copia 1 67 -4526 6 625 416 197 0 0 chrU 5330923 5330994 -4718043 + HETA LINE telomeric 4533 4603 -1478 6 625 25 75 0 0 chrU 5331348 5331401 -4717636 + AT_rich Low_complexity Low_complexity 1 53 0 6 625 1302 299 27 20 chrU 5331620 5332169 -4716868 + Copia_I LTR Copia 156 708 -3885 6 625 890 260 134 11 chrU 5332532 5333090 -4715947 + Copia_I LTR Copia 1653 2279 -2314 6 625 5062 21 41 3 chrU 5333158 5334222 -4714815 - PROTOP_A DNA P 0 1105 1 6 625 302 148 3 0 chrU 5334428 5334485 -4714552 + HETA LINE telomeric 4170 4217 -1864 6 625 24 0 0 0 chrU 5334759 5334783 -4714254 + AT_rich Low_complexity Low_complexity 1 24 0 6 625 25 75 0 0 chrU 5334843 5334896 -4714141 + AT_rich Low_complexity Low_complexity 1 53 0 6 625 1104 296 29 22 chrU 5335119 5335668 -4713369 + Copia_I LTR Copia 156 708 -3885 6 625 284 148 0 0 chrU 5336421 5336475 -4712562 + Copia_I LTR Copia 1400 1453 -3140 6 625 4715 83 84 11 chrU 5336639 5337934 -4711103 + IDEFIX_I LTR Gypsy 1520 2909 -2719 6 625 10824 41 38 1 chrU 5345892 5347278 -4701759 + DMCR1A LINE CR1 199 1636 -2834 6 625 7232 31 71 27 chrU 5347283 5348342 -4700695 + PROTOP_A DNA P 1 1105 0 6 625 11335 26 21 1 chrU 5348342 5349741 -4699296 + DMCR1A LINE CR1 1639 3066 -1404 6 625 1414 42 106 11 chrU 5349739 5350088 -4698949 + DMCR1A LINE CR1 60 441 -4029 6 625 4562 27 2 0 chrU 5350083 5350645 -4698392 + DMRT1A LINE R1 1096 1658 -3525 6 625 838 327 54 16 chrU 5350750 5351252 -4697785 + MICROPIA_I LTR Gypsy 3354 3850 -626 6 625 253 232 34 34 chrU 5352408 5352497 -4696540 - G2_DM LINE Jockey -158 2944 2856 6 625 1045 71 161 0 chrU 5352542 5352710 -4696327 - DMCR1A LINE CR1 -13 4457 4263 6 625 5580 50 75 0 chrU 5352701 5353462 -4695575 - DMCR1A LINE CR1 -468 4002 3185 6 625 3172 72 95 8 chrU 5353448 5353941 -4695096 - DMCR1A LINE CR1 -2042 2428 1893 6 625 1216 141 37 0 chrU 5353944 5354185 -4694852 - Gypsy8_I LTR Gypsy -585 3762 3513 6 625 4529 42 3 0 chrU 5354191 5354816 -4694221 + DMCR1A LINE CR1 205 913 -3557 6 625 377 22 0 0 chrU 5362078 5362124 -4686913 - STALKER4_LTR LTR Gypsy -356 46 1 6 625 462 97 14 0 chrU 5362124 5362191 -4686846 + DMCR1A LINE CR1 1133 1200 -3270 6 625 1933 92 0 19 chrU 5362193 5362503 -4686534 + Gypsy8_LTR LTR Gypsy 1 304 0 6 625 1003 93 25 6 chrU 5362503 5362666 -4686371 + Gypsy8_I LTR Gypsy 1 166 -4181 6 625 928 291 43 44 chrU 5363429 5364127 -4684910 - ZAM_I LTR Gypsy -1831 5659 4963 6 625 4031 30 86 2 chrU 5364398 5364959 -4684078 + IDEFIX_I LTR Gypsy 2196 2803 -2825 6 625 234 0 0 0 chrU 5364959 5364985 -4684052 + (T)n Simple_repeat Simple_repeat 1 26 0 6 625 9169 49 6 2 chrU 5364998 5366256 -4682781 + IDEFIX_I LTR Gypsy 2897 4159 -1469 6 626 15581 77 76 39 chrU 5374249 5377254 -4671783 + BATUMI_I LTR Pao 2478 5593 -2370 6 626 5961 25 40 0 chrU 5377354 5378104 -4670933 - MAX_I LTR Pao -2491 5423 4644 6 626 2544 29 0 3 chrU 5378105 5378416 -4670621 - MAX_I LTR Pao -4135 3779 3470 6 626 2136 119 20 34 chrU 5387347 5387755 -4661282 - GTWIN_LTR LTR Gypsy -93 402 1 6 626 966 101 0 0 chrU 5387755 5387894 -4661143 - GTWIN_I LTR Gypsy 0 6421 6283 6 626 11755 131 53 20 chrU 5387908 5389813 -4659224 - GTWIN_I LTR Gypsy -299 6122 4155 6 626 1262 45 62 0 chrU 5389914 5390091 -4658946 - LOOPER1_DM DNA PiggyBac -1693 188 1 6 626 609 209 28 120 chrU 5390151 5390510 -4658527 - ROVER-I_DM LTR Gypsy -6258 326 1 6 626 754 59 0 0 chrU 5390585 5390687 -4658350 - ROVER-LTR_DM LTR Gypsy -220 147 46 6 626 349 39 0 89 chrU 5390714 5390770 -4658267 + QUASIMODO_LTR LTR Gypsy 1 51 -607 6 626 1018 8 0 0 chrU 5390995 5391114 -4657923 + DMRT1B LINE R1 1 119 -5064 6 626 3918 257 39 19 chrU 5400574 5401915 -4647122 - ROVER-I_DM LTR Gypsy -3906 2678 1312 6 626 1283 328 35 28 chrU 5402372 5403220 -4645817 - DIVER2_I LTR Pao -276 3871 3018 6 626 365 304 7 0 chrU 5403831 5403966 -4645071 - DIVER2_I LTR Pao -1758 2389 2254 6 626 996 127 320 58 chrU 5404479 5404873 -4644164 - G3_DM LINE Jockey -4026 579 82 6 626 2731 53 114 11 chrU 5413218 5413747 -4635290 - DMCR1A LINE CR1 -3732 738 169 6 626 227 31 0 30 chrU 5413747 5413780 -4635257 + (CTA)n Simple_repeat Simple_repeat 3 34 0 6 626 2731 54 41 10 chrU 5413780 5413822 -4635215 - DMCR1A LINE CR1 -4302 168 111 6 626 2200 108 82 0 chrU 5413922 5414275 -4634762 - Gypsy12_I LTR Gypsy -2716 2830 2449 6 626 204 40 0 0 chrU 5414470 5414495 -4634542 + (CAA)n Simple_repeat Simple_repeat 2 26 0 6 626 22 94 0 0 chrU 5415548 5415612 -4633425 + AT_rich Low_complexity Low_complexity 1 64 0 6 626 29 70 0 0 chrU 5415643 5415700 -4633337 + AT_rich Low_complexity Low_complexity 1 57 0 6 626 24 0 0 0 chrU 5415749 5415773 -4633264 + AT_rich Low_complexity Low_complexity 1 24 0 6 626 1506 57 43 4 chrU 5415935 5416165 -4632872 - PROTOP_A DNA P -592 513 275 6 626 26 30 0 0 chrU 5424584 5424617 -4624420 + AT_rich Low_complexity Low_complexity 1 33 0 6 626 3829 51 6 0 chrU 5424752 5425261 -4623776 - PROTOP DNA P -3968 512 1 6 626 509 126 70 12 chrU 5425401 5425543 -4623494 - TART LINE telomeric -3988 10489 10370 6 626 461 215 15 8 chrU 5425543 5425685 -4623352 - TART LINE telomeric -4179 10298 10175 6 626 952 32 0 0 chrU 5425785 5425911 -4623126 - DM297_I LTR Gypsy -1766 4401 4276 6 626 3353 7 7 7 chrU 5425921 5426335 -4622702 - DM297_LTR LTR Gypsy 0 414 1 6 626 23 0 0 0 chrU 5426649 5426672 -4622365 + AT_rich Low_complexity Low_complexity 1 23 0 6 626 300 137 0 0 chrU 5436655 5436706 -4612331 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 626 23 0 0 0 chrU 5436988 5437011 -4612026 + AT_rich Low_complexity Low_complexity 1 23 0 6 626 3154 6 0 0 chrU 5437454 5437815 -4611222 - LINEJ1_DM LINE Jockey -1332 3688 3328 6 626 27 29 0 0 chrU 5438376 5438410 -4610627 + AT_rich Low_complexity Low_complexity 1 34 0 6 626 238 204 0 0 chrU 5438490 5438539 -4610498 - Gypsy5_I LTR Gypsy -6460 49 1 6 626 663 166 26 80 chrU 5438686 5438880 -4610157 - Gypsy5_LTR LTR Gypsy -165 265 1 6 626 342 325 19 6 chrU 5440185 5440346 -4608691 - DIVER2_I LTR Pao -2346 1801 1639 6 626 850 167 0 0 chrU 5440447 5440597 -4608440 - G3_DM LINE Jockey -4028 577 428 6 626 647 65 11 0 chrU 5440642 5440734 -4608303 - G3_DM LINE Jockey -4512 93 1 6 626 1611 169 3 0 chrU 5441190 5441503 -4607534 + FW_DM LINE Jockey 4368 4681 -11 6 626 204 194 14 29 chrU 5441607 5441676 -4607361 + T-rich Low_complexity Low_complexity 5 72 0 6 626 31 44 0 0 chrU 5441734 5441779 -4607258 + AT_rich Low_complexity Low_complexity 1 45 0 6 626 34 72 0 0 chrU 5441973 5442042 -4606995 + AT_rich Low_complexity Low_complexity 1 69 0 6 626 330 262 0 0 chrU 5442370 5442473 -4606564 + QUASIMODO_I LTR Gypsy 4687 4789 -1271 6 626 830 311 89 43 chrU 5443491 5444324 -4604713 + Copia2_I LTR Copia 974 1844 -2318 6 626 309 259 37 9 chrU 5444347 5444456 -4604581 + Copia2_I LTR Copia 2063 2174 -1988 6 626 615 289 5 11 chrU 5444848 5445078 -4603959 + Copia2_I LTR Copia 2595 2792 -1370 6 626 826 300 14 14 chrU 5445094 5445391 -4603646 + Copia2_I LTR Copia 2872 3168 -994 6 626 920 323 25 9 chrU 5445411 5445845 -4603192 + Copia2_I LTR Copia 3255 3695 -467 6 626 1014 296 6 6 chrU 5446032 5446395 -4602642 + Copia2_I LTR Copia 3703 4065 -97 6 626 1189 116 0 93 chrU 5446494 5446741 -4602296 - DIVER_LTR LTR Pao 0 224 1 6 626 4757 38 0 0 chrU 5446741 5447319 -4601718 - DIVER_I LTR Pao 0 5643 5066 6 626 11792 26 4 1 chrU 5447419 5448830 -4600207 + R1_DM LINE R1 3941 5356 0 6 626 4586 66 3 3 chrU 5448863 5449475 -4599562 + R1_DM LINE R1 1 612 -4744 6 626 30278 26 7 1 chrU 5449473 5453122 -4595915 + R1_DM LINE R1 1157 4830 -526 6 626 2826 21 0 0 chrU 5453119 5453451 -4595586 + R1_DM LINE R1 5025 5356 0 6 626 4694 57 3 3 chrU 5453484 5454098 -4594939 + R1_DM LINE R1 1 614 -4742 6 626 7038 34 98 1 chrU 5454098 5455393 -4593644 + R1_DM LINE R1 810 2230 -3126 6 626 6726 25 72 1 chrU 5455391 5456787 -4592250 + R1_DM LINE R1 2763 4258 -1098 6 626 2379 154 20 21 chrU 5456887 5460121 -4588916 - DMSAT6 Satellite Satellite -3 3232 1 6 626 2574 106 20 19 chrU 5460137 5462868 -4586169 - DMSAT6 Satellite Satellite 0 2734 1 6 626 2559 103 22 38 chrU 5462899 5466228 -4582809 - DMSAT6 Satellite Satellite -3 3278 1 6 626 3558 157 74 8 chrU 5468285 5469005 -4580032 - NOMAD_I LTR Gypsy -836 5736 4970 6 626 13357 114 21 6 chrU 5469000 5470974 -4578063 - NOMAD_I LTR Gypsy -1883 4689 2686 6 626 1035 44 225 12 chrU 5470979 5471232 -4577805 + TC1-2_DM DNA Tc1 3 309 -1335 6 626 2341 65 3 15 chrU 5471473 5471799 -4577238 - FW3_DM LINE Jockey -1092 2040 1719 6 626 1677 24 14 19 chrU 5471793 5472009 -4577028 - FW3_DM LINE Jockey -1776 1356 1142 6 626 2609 45 16 2 chrU 5472004 5472393 -4576644 - FW3_DM LINE Jockey -3059 902 415 6 626 4402 95 110 8 chrU 5472390 5473154 -4575883 - Stalker2_I LTR Gypsy -3226 4176 3335 6 626 1872 97 30 7 chrU 5473161 5473463 -4575574 - STALKER4_I LTR Gypsy -3605 2925 2617 6 626 285 28 0 0 chrU 5473465 5473501 -4575536 - STALKER4_I LTR Gypsy -4180 2350 2315 6 626 5321 162 89 34 chrU 5473510 5474752 -4574285 - STALKER4_I LTR Gypsy -4336 2194 885 6 626 14336 17 1 2 chrU 5475096 5476840 -4572197 - QUASIMODO_I LTR Gypsy -4319 1741 1 6 626 5483 14 11 0 chrU 5476840 5477491 -4571546 - QUASIMODO_LTR LTR Gypsy 0 658 1 6 626 43 20 0 0 chrU 5478670 5478720 -4570317 + AT_rich Low_complexity Low_complexity 1 50 0 6 626 1553 112 52 34 chrU 5478876 5479143 -4569894 - G5A_DM LINE Jockey 0 2841 2570 6 626 27 0 0 0 chrU 5479340 5479367 -4569670 + AT_rich Low_complexity Low_complexity 1 27 0 6 626 483 318 28 19 chrU 5479367 5479582 -4569455 - LINEJ1_DM LINE Jockey -3763 1257 1041 6 626 593 252 89 30 chrU 5480223 5480460 -4568577 + ROO_I LTR Pao 2987 3237 -5019 6 626 10132 38 116 8 chrU 5480480 5482320 -4566717 - G4_DM LINE Jockey 0 3856 1817 6 626 6125 67 8 11 chrU 5482348 5483205 -4565832 - G4_DM LINE Jockey -2035 1821 967 6 626 1479 22 0 0 chrU 5483203 5483381 -4565656 - G4_DM LINE Jockey -3111 745 568 6 626 541 45 0 0 chrU 5483375 5483442 -4565595 - G4_DM LINE Jockey -3622 234 168 6 626 2450 100 11 39 chrU 5483542 5484010 -4565027 - DMSAT6 Satellite Satellite -15 455 1 6 626 2606 106 21 19 chrU 5484026 5486078 -4562959 - DMSAT6 Satellite Satellite 0 2055 1 6 626 2771 96 23 27 chrU 5486094 5490644 -4558393 - DMSAT6 Satellite Satellite 0 4531 1 6 626 2615 96 48 38 chrU 5490660 5491547 -4557490 - DMSAT6 Satellite Satellite 0 895 1 6 626 22 22 0 62 chrU 5492697 5492745 -4556292 + AT_rich Low_complexity Low_complexity 1 45 0 6 626 35 71 0 0 chrU 5493170 5493240 -4555797 + AT_rich Low_complexity Low_complexity 1 70 0 6 626 658 258 257 25 chrU 5493780 5494219 -4554818 + MDG1_I LTR Gypsy 5125 5665 -931 6 626 35 54 0 0 chrU 5494264 5494320 -4554717 + AT_rich Low_complexity Low_complexity 1 56 0 6 626 252 117 16 48 chrU 5494334 5494397 -4554640 + DNAREP1_DM LINE Penelope 203 263 -331 6 626 11459 93 38 16 chrU 5494351 5496276 -4552761 + I_DM LINE I 56 2022 -4209 6 626 8800 86 122 11 chrU 5496272 5497989 -4551048 + I_DM LINE I 1829 3735 -2496 6 626 2896 89 18 0 chrU 5497988 5498439 -4550598 + I_DM LINE I 4120 4578 -1653 6 626 1101 70 19 0 chrU 5498783 5498940 -4550097 + I_DM LINE I 4570 4729 -1502 6 626 2660 83 16 5 chrU 5498945 5499371 -4549666 + I_DM LINE I 4976 5406 -825 6 626 2254 91 6 55 chrU 5499475 5500000 -4549037 + DMSAT6 Satellite Satellite 1 498 -3 6 626 2911 95 22 30 chrU 5500000 5501666 -4547371 + DMSAT6 Satellite Satellite 1 1652 -29 6 626 2792 107 23 25 chrU 5501699 5504848 -4544189 + DMSAT6 Satellite Satellite 1 3141 0 6 78 2719 97 16 13 chrU 5504864 5506785 -4542252 + DMSAT6 Satellite Satellite 1 1925 0 6 627 31 0 0 0 chrU 5506885 5506916 -4542121 + AT_rich Low_complexity Low_complexity 1 31 0 6 627 680 0 119 0 chrU 5506916 5507236 -4541801 + (TTA)n Simple_repeat Simple_repeat 1 358 0 6 627 24 67 0 0 chrU 5507701 5507746 -4541291 + AT_rich Low_complexity Low_complexity 1 45 0 6 627 216 0 75 25 chrU 5507980 5508020 -4541017 + (TATAA)n Simple_repeat Simple_repeat 2 43 0 6 627 914 77 46 8 chrU 5508448 5508579 -4540458 - DNAREP1_DM LINE Penelope -457 137 2 6 627 26 30 0 0 chrU 5511031 5511064 -4537973 + AT_rich Low_complexity Low_complexity 1 33 0 6 627 903 146 357 28 chrU 5511942 5512244 -4536793 - DNAREP1_DM LINE Penelope -2 592 193 6 627 364 206 88 0 chrU 5512279 5512381 -4536656 - DNAREP1_DM LINE Penelope -483 111 1 6 627 24 106 0 0 chrU 5513150 5513244 -4535793 + AT_rich Low_complexity Low_complexity 1 94 0 6 627 41 58 0 0 chrU 5513626 5513695 -4535342 + AT_rich Low_complexity Low_complexity 1 69 0 6 627 3338 150 53 22 chrU 5514447 5515089 -4533948 - Stalker2_I LTR Gypsy -6499 903 242 6 627 288 65 87 0 chrU 5515282 5515328 -4533709 - Stalker2_I LTR Gypsy -7352 50 1 6 627 1633 7 239 3 chrU 5515328 5515629 -4533408 - Stalker3_LTR LTR Gypsy 0 372 1 6 627 2085 21 4 0 chrU 5515629 5515865 -4533172 + R1_DM LINE R1 4830 5066 -290 6 627 745 61 152 0 chrU 5515862 5515961 -4533076 + R1_DM LINE R1 5243 5356 0 6 627 4537 61 32 7 chrU 5515994 5516590 -4532447 + R1_DM LINE R1 1 611 -4745 6 627 25925 29 23 0 chrU 5516592 5519607 -4529430 + R1_DM LINE R1 1247 4328 -1028 6 627 3067 37 67 0 chrU 5519606 5519980 -4529057 + R1_DM LINE R1 4465 4863 -493 6 627 256 108 0 0 chrU 5519971 5520008 -4529029 + R1_DM LINE R1 5320 5356 0 6 627 779 68 10 0 chrU 5520041 5520144 -4528893 + R1_DM LINE R1 1 104 -5252 6 627 5819 54 68 1 chrU 5520141 5521285 -4527752 + R1_DM LINE R1 311 1531 -3825 6 627 1238 47 6 45 chrU 5521385 5521564 -4527473 - PROTOP_A DNA P -735 370 199 6 627 46 0 0 0 chrU 5521580 5521626 -4527411 + AT_rich Low_complexity Low_complexity 1 46 0 6 627 401 42 0 0 chrU 5522070 5522118 -4526919 - PROTOP_A DNA P -903 202 155 6 627 1082 16 63 0 chrU 5522529 5522655 -4526382 - PROTOP_A DNA P -903 202 69 6 627 1321 72 202 0 chrU 5522670 5522942 -4526095 - DIVER2_I LTR Pao -3820 327 1 6 627 2926 37 9 3 chrU 5522942 5523292 -4525745 - DIVER2_LTR LTR Pao 0 385 34 6 627 2372 58 77 0 chrU 5523837 5524198 -4524839 + PROTOP DNA P 373 761 -3719 6 627 5869 15 0 0 chrU 5524198 5524856 -4524181 - QUASIMODO_LTR LTR Gypsy 0 658 1 6 627 1541 26 21 0 chrU 5524856 5525050 -4523987 - QUASIMODO_I LTR Gypsy 0 6060 5863 6 627 4101 39 8 21 chrU 5525073 5525597 -4523440 - PROTOP DNA P -3149 1331 815 6 627 4530 8 0 2 chrU 5525610 5526108 -4522929 - QUASIMODO_LTR LTR Gypsy 0 658 162 6 627 227 0 0 0 chrU 5526142 5526167 -4522870 - QUASIMODO_LTR LTR Gypsy -633 25 1 6 627 3157 35 9 16 chrU 5526167 5526597 -4522440 - QUASIMODO_I LTR Gypsy 0 6060 5634 6 627 14833 15 29 0 chrU 5526602 5528388 -4520649 - QUASIMODO_I LTR Gypsy -789 5271 3434 6 627 1620 0 0 2 chrU 5528488 5528973 -4520064 + (GAGAA)n Simple_repeat Simple_repeat 1 483 0 6 627 576 70 14 45 chrU 5528978 5529078 -4519959 + G5A_DM LINE Jockey 2763 2841 0 6 627 25 31 0 0 chrU 5533147 5533179 -4515858 + AT_rich Low_complexity Low_complexity 1 32 0 6 627 315 182 66 37 chrU 5533643 5533771 -4515266 - DOC LINE Jockey -25 4768 4625 6 627 4183 2 11 0 chrU 5533782 5534237 -4514800 - ACCORD_LTR LTR Gypsy 0 558 99 6 627 9329 62 2 2 chrU 5534237 5535423 -4513614 + S_DM DNA Tc1 1 1187 -549 6 627 1003 179 0 0 chrU 5535524 5535720 -4513317 + TART LINE telomeric 5703 5898 -8579 6 627 1566 132 182 6 chrU 5535739 5536057 -4512980 + TART LINE telomeric 5493 5866 -8611 6 627 9483 24 0 3 chrU 5536057 5537165 -4511872 + PROTOP_A DNA P 1 1105 0 6 627 6938 135 92 60 chrU 5537165 5538580 -4510457 + TART LINE telomeric 5860 7320 -7157 6 627 272 132 0 0 chrU 5538580 5538618 -4510419 + TART LINE telomeric 14036 14073 -404 6 627 4527 127 0 0 chrU 5538586 5539317 -4509720 + TART_B1 LINE telomeric 1058 1788 -8866 6 627 3647 96 158 10 chrU 5539448 5539603 -4509434 + DMRT1B LINE R1 1 141 -5042 6 627 180 0 0 0 chrU 5539603 5539623 -4509414 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 6 627 3647 43 148 0 chrU 5539623 5539991 -4509046 + DMRT1B LINE R1 142 555 -4628 6 627 427 40 0 0 chrU 5539991 5540041 -4508996 + DMRT1B LINE R1 878 927 -4256 6 627 6538 47 51 0 chrU 5540040 5540846 -4508191 + DMRT1B LINE R1 1683 2529 -2654 6 627 3009 52 58 0 chrU 5540834 5541215 -4507822 + DMRT1B LINE R1 3038 3440 -1743 6 627 222 147 43 14 chrU 5541251 5541320 -4507717 + (TTATA)n Simple_repeat Simple_repeat 4 74 0 6 627 26 50 0 0 chrU 5541485 5541525 -4507512 + AT_rich Low_complexity Low_complexity 1 40 0 6 627 22 0 0 0 chrU 5541704 5541726 -4507311 + AT_rich Low_complexity Low_complexity 1 22 0 6 627 3660 40 0 5 chrU 5542528 5542957 -4506080 + BATUMI_I LTR Pao 5994 6420 -1543 6 627 3281 45 7 14 chrU 5542983 5543407 -4505630 - BATUMI_I LTR Pao -962 7001 6581 6 627 2939 67 127 5 chrU 5543457 5544034 -4505003 + BATUMI_I LTR Pao 7303 7949 -14 6 627 12007 61 44 8 chrU 5544035 5545934 -4503103 - IDEFIX_I LTR Gypsy -1229 4399 2432 6 627 198 0 0 0 chrU 5546280 5546302 -4502735 + (A)n Simple_repeat Simple_repeat 1 22 0 6 627 18848 4 0 1 chrU 5547361 5549428 -4499609 - POGO DNA Pogo 0 2121 57 6 627 22 0 0 0 chrU 5549554 5549576 -4499461 + AT_rich Low_complexity Low_complexity 1 22 0 6 627 901 144 29 58 chrU 5550038 5550245 -4498792 - TLD2 Unknown Unknown -16 202 2 6 627 466 352 64 14 chrU 5550182 5550615 -4498422 - Gypsy_DS LTR Gypsy -4193 3329 3008 6 627 1265 167 27 15 chrU 5551099 5551360 -4497677 + FW_DM LINE Jockey 3048 3311 -1381 6 627 3943 116 24 2 chrU 5551365 5551945 -4497092 + FW_DM LINE Jockey 3654 4246 -446 6 627 234 171 0 0 chrU 5551952 5551993 -4497044 + FW_DM LINE Jockey 4361 4401 -291 6 627 348 71 71 0 chrU 5552021 5552091 -4496946 + FW_DM LINE Jockey 4612 4686 -6 6 627 208 247 12 12 chrU 5552260 5552342 -4496695 + T-rich Low_complexity Low_complexity 3 84 0 6 627 27 62 0 0 chrU 5552374 5552422 -4496615 + AT_rich Low_complexity Low_complexity 1 48 0 6 627 41 21 0 0 chrU 5552616 5552664 -4496373 + AT_rich Low_complexity Low_complexity 1 48 0 6 627 2210 38 11 0 chrU 5552664 5552927 -4496110 + Invader2_LTR LTR Gypsy 1 266 0 6 627 462 31 45 15 chrU 5552928 5552994 -4496043 + Invader2_I LTR Gypsy 2 69 -4523 6 627 3570 17 0 0 chrU 5553014 5553423 -4495614 + Copia2_I LTR Copia 3754 4162 0 6 627 1779 0 0 5 chrU 5553423 5553622 -4495415 + Copia2_LTR_DM LTR Copia 1 198 0 6 627 27 62 0 0 chrU 5553623 5553671 -4495366 + AT_rich Low_complexity Low_complexity 1 48 0 6 627 2020 122 16 9 chrU 5553824 5554139 -4494898 - FW_DM LINE Jockey -464 4228 3912 6 627 41 21 0 0 chrU 5554862 5554910 -4494127 + AT_rich Low_complexity Low_complexity 1 48 0 6 627 2210 38 11 0 chrU 5554910 5555173 -4493864 + Invader2_LTR LTR Gypsy 1 266 0 6 627 9929 21 57 0 chrU 5555174 5556388 -4492649 + Invader2_I LTR Gypsy 2 1284 -3308 6 627 5801 16 43 25 chrU 5556488 5557235 -4491802 + PROTOP_A DNA P 346 1105 0 6 627 384 138 92 0 chrU 5558520 5558585 -4490452 - G3_DM LINE Jockey -4026 579 509 6 627 387 22 0 0 chrU 5558596 5558642 -4490395 - G3_DM LINE Jockey -4457 148 103 6 627 389 146 347 8 chrU 5559752 5559876 -4489161 - DMCR1A LINE CR1 -222 4248 4083 6 627 391 38 132 22 chrU 5559882 5560018 -4489019 + (TATAA)n Simple_repeat Simple_repeat 2 152 0 6 627 1075 151 95 29 chrU 5560147 5560414 -4488623 - DNAREP1_DM LINE Penelope -251 343 59 6 627 3429 41 2 21 chrU 5560414 5560842 -4488195 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 627 27 0 0 65 chrU 5561098 5561144 -4487893 + AT_rich Low_complexity Low_complexity 1 43 0 6 627 1715 293 96 51 chrU 5561291 5562661 -4486376 + Gypsy2_I LTR Gypsy 1398 2765 -3412 6 627 1226 45 130 0 chrU 5562665 5562834 -4486203 + PROTOP DNA P 3133 3324 -1156 6 627 2460 76 32 20 chrU 5562834 5563250 -4485787 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 627 385 58 0 0 chrU 5563250 5563302 -4485735 + Gypsy6_I LTR Gypsy 1 52 -6960 6 627 313 318 75 42 chrU 5564385 5564751 -4484286 - Gypsy3_I LTR Gypsy -4806 1371 708 6 627 36 0 0 0 chrU 5565666 5565702 -4483335 + AT_rich Low_complexity Low_complexity 1 36 0 6 627 31 82 0 0 chrU 5566249 5566322 -4482715 + AT_rich Low_complexity Low_complexity 1 73 0 6 627 33 25 0 0 chrU 5566534 5566574 -4482463 + AT_rich Low_complexity Low_complexity 1 40 0 6 627 7405 27 14 0 chrU 5567250 5568132 -4480905 + FW_DM LINE Jockey 2992 3885 -807 6 627 1436 22 0 0 chrU 5568713 5568894 -4480143 + FW_DM LINE Jockey 4505 4685 -7 6 627 254 255 69 39 chrU 5569685 5569787 -4479250 - Gypsy6_I LTR Gypsy -2306 4706 4602 6 627 1294 127 5 23 chrU 5570373 5570591 -4478446 - DNAREP1_DM LINE Penelope -380 214 1 6 627 330 146 0 0 chrU 5570605 5570660 -4478377 + R1_DM LINE R1 225 279 -5077 6 627 5224 152 195 16 chrU 5570706 5571793 -4477244 + R1_DM LINE R1 560 1841 -3515 6 627 3505 74 22 0 chrU 5571791 5572252 -4476785 + R1_DM LINE R1 2126 2596 -2760 6 627 1711 109 0 4 chrU 5572250 5572508 -4476529 - DMRT1C LINE R1 -2262 3181 2925 6 627 1653 104 157 6 chrU 5572500 5572991 -4476046 - DMRT1C LINE R1 -2956 2487 1923 6 627 236 161 0 16 chrU 5573550 5573613 -4475424 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 6 627 239 98 0 0 chrU 5574511 5574562 -4474475 + DNAREP1_DM LINE Penelope 218 268 -326 6 627 1316 115 46 9 chrU 5574570 5574789 -4474248 + DNAREP1_DM LINE Penelope 219 445 -149 6 627 22 0 0 0 chrU 5574864 5574886 -4474151 + AT_rich Low_complexity Low_complexity 1 22 0 6 627 1252 121 87 0 chrU 5575934 5576140 -4472897 + DNAREP1_DM LINE Penelope 371 594 0 6 627 1554 18 0 0 chrU 5576269 5576596 -4472441 + (TTA)n Simple_repeat Simple_repeat 1 327 0 6 627 709 73 0 26 chrU 5576980 5577093 -4471944 - Mariner2_DM DNA Tc1 0 912 803 6 627 8738 0 1 0 chrU 5577193 5578184 -4470853 + ROO_I LTR Pao 7265 8256 0 6 627 3931 0 0 0 chrU 5578184 5578612 -4470425 + ROO_LTR LTR Pao 1 428 0 6 627 2836 83 2 30 chrU 5578647 5579079 -4469958 - Jockey2 LINE Jockey -29 3399 2980 6 627 3129 69 10 4 chrU 5579075 5579747 -4469290 + DOC5_DM LINE Jockey 504 1257 -3425 6 627 2011 56 139 0 chrU 5579746 5580301 -4468736 + DOC5_DM LINE Jockey 1956 2587 -2095 6 627 12495 47 54 1 chrU 5580307 5581985 -4467052 + DOC5_DM LINE Jockey 2813 4579 -103 6 627 4921 24 0 0 chrU 5581985 5582573 -4466464 - PROTOP_A DNA P 0 1105 518 6 627 2081 21 0 0 chrU 5582568 5582806 -4466231 - PROTOP_A DNA P -867 238 1 6 627 795 38 48 0 chrU 5582806 5582911 -4466126 + DOC5_DM LINE Jockey 4573 4682 0 6 627 31 58 0 0 chrU 5583278 5583330 -4465707 + AT_rich Low_complexity Low_complexity 1 52 0 6 627 255 244 11 11 chrU 5583357 5583448 -4465589 - Gypsy10_I LTR Gypsy -4932 346 256 6 627 556 96 146 21 chrU 5583436 5583532 -4465505 - DNAREP1_DM LINE Penelope -59 535 428 6 627 1620 0 0 0 chrU 5583539 5583890 -4465147 + (GGAGAA)n Simple_repeat Simple_repeat 1 351 0 6 627 208 200 31 0 chrU 5584019 5584084 -4464953 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 627 22 0 0 0 chrU 5584590 5584612 -4464425 + AT_rich Low_complexity Low_complexity 1 22 0 6 627 1364 304 63 36 chrU 5585313 5586859 -4462178 + Copia2_I LTR Copia 521 2174 -1988 6 627 529 277 0 0 chrU 5586908 5587063 -4461974 + Copia2_I LTR Copia 3911 4065 -97 6 627 208 200 31 0 chrU 5587328 5587393 -4461644 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 627 220 141 46 15 chrU 5587856 5587921 -4461116 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 627 22 35 0 0 chrU 5588207 5588236 -4460801 + AT_rich Low_complexity Low_complexity 1 29 0 6 627 51 31 0 0 chrU 5588411 5588476 -4460561 + AT_rich Low_complexity Low_complexity 1 65 0 6 627 22 35 0 0 chrU 5588804 5588833 -4460204 + AT_rich Low_complexity Low_complexity 1 29 0 6 627 208 200 31 0 chrU 5589027 5589092 -4459945 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 627 224 185 31 0 chrU 5589552 5589617 -4459420 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 627 22 35 0 0 chrU 5589904 5589933 -4459104 + AT_rich Low_complexity Low_complexity 1 29 0 6 627 58 15 0 0 chrU 5590108 5590173 -4458864 + AT_rich Low_complexity Low_complexity 1 65 0 6 627 22 35 0 0 chrU 5590501 5590530 -4458507 + AT_rich Low_complexity Low_complexity 1 29 0 6 627 13845 3 0 1 chrU 5590637 5592191 -4456846 - G6_DM LINE Jockey -489 1553 1 6 627 2993 313 59 32 chrU 5592302 5594208 -4454829 + Copia2_I LTR Copia 833 2789 -1373 6 627 558 286 22 0 chrU 5594197 5594382 -4454655 + Copia2_I LTR Copia 3877 4065 -97 6 627 2962 203 32 15 chrU 5594672 5596864 -4452173 - SAR_DM Satellite Satellite -1116 2229 1 6 627 925 189 29 7 chrU 5596898 5596982 -4452055 - SAR_DM Satellite Satellite -378 258 1 6 627 963 130 12 0 chrU 5596982 5597151 -4451886 + ARS406_DM Unknown Unknown 1 171 -182 6 627 18972 9 0 0 chrU 5597251 5599363 -4449674 - Gypsy4_I LTR Gypsy -3462 2826 715 6 627 679 35 0 11 chrU 5599354 5599441 -4449596 - Gypsy4_LTR LTR Gypsy -201 86 1 6 627 2025 32 41 0 chrU 5599441 5599687 -4449350 + PROTOP DNA P 4225 4480 0 6 627 1213 23 51 34 chrU 5599687 5599865 -4449172 + ROO_I LTR Pao 460 640 -7616 6 627 387 132 0 0 chrU 5599865 5599933 -4449104 + (CAG)n Simple_repeat Simple_repeat 1 68 0 6 627 446 35 0 0 chrU 5599933 5599990 -4449047 + ROO_I LTR Pao 730 786 -7470 6 627 522 329 74 46 chrU 5600424 5600883 -4448154 - NOMAD_I LTR Gypsy 0 6572 6101 6 627 261 217 0 0 chrU 5601527 5601587 -4447450 - NOMAD_I LTR Gypsy -569 6003 5944 6 627 4328 314 20 18 chrU 5602116 5603690 -4445347 - NOMAD_I LTR Gypsy -1017 5555 3978 6 627 186 43 0 0 chrU 5603906 5603929 -4445108 + (TTTTTA)n Simple_repeat Simple_repeat 1 23 0 6 627 23 0 0 0 chrU 5604213 5604236 -4444801 + AT_rich Low_complexity Low_complexity 1 23 0 6 627 2365 214 38 23 chrU 5604577 5605180 -4443857 + TOM_I LTR Gypsy 2448 3059 -3053 6 627 866 213 99 5 chrU 5605254 5605466 -4443571 + TOM_I LTR Gypsy 3727 3958 -2154 6 627 1564 262 119 54 chrU 5605465 5606654 -4442383 - TOM_I LTR Gypsy -4916 1251 1 6 627 1331 52 9 0 chrU 5606654 5606957 -4442080 - DMTOM1_LTR LTR Gypsy 0 410 2 6 627 2032 134 20 3 chrU 5606958 5607301 -4441736 - DNAREP1_DM LINE Penelope -105 489 141 6 627 25 31 0 0 chrU 5607301 5607333 -4441704 + AT_rich Low_complexity Low_complexity 1 32 0 6 627 2498 74 32 20 chrU 5607875 5608284 -4440753 - Gypsy6A_LTR LTR Gypsy -7 413 1 6 627 907 174 170 14 chrU 5608427 5608705 -4440332 + Gypsy2_LTR LTR Gypsy 1 322 -31 6 627 4600 4 55 0 chrU 5608705 5609049 -4439988 - ACCORD_LTR LTR Gypsy 0 558 215 6 627 210 118 0 0 chrU 5609049 5609083 -4439954 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 627 4600 4 55 0 chrU 5609083 5609267 -4439770 - ACCORD_LTR LTR Gypsy -344 214 2 6 627 3373 0 0 0 chrU 5609267 5609638 -4439399 - ACCORD_I LTR Gypsy 0 6288 5918 6 627 2796 16 0 0 chrU 5609628 5609949 -4439088 - ACCORD_I LTR Gypsy -2933 3355 3035 6 627 2266 8 4 4 chrU 5609939 5610206 -4438831 - ACCORD_I LTR Gypsy -5524 764 498 6 627 551 0 124 11 chrU 5610306 5610676 -4438361 + (TA)n Simple_repeat Simple_repeat 1 411 0 6 627 698 161 0 0 chrU 5610695 5610825 -4438212 + Gypsy5_I LTR Gypsy 2248 2377 -4132 6 627 1538 242 98 12 chrU 5610842 5611269 -4437768 - Gypsy5_I LTR Gypsy -5510 999 536 6 627 1506 178 0 0 chrU 5611293 5611568 -4437469 - HETA LINE telomeric -2806 3275 3001 6 627 9510 52 41 99 chrU 5611735 5613195 -4435842 + CIRCE LINE Composite 4981 6356 0 6 627 7378 50 27 42 chrU 5613195 5614179 -4434858 + CIRCE LINE Composite 1 970 -5386 6 627 5937 56 27 118 chrU 5614321 5615272 -4433765 + CIRCE LINE Composite 973 1837 -4519 6 627 5107 59 3 25 chrU 5615680 5616356 -4432681 + CIRCE LINE Composite 2127 2787 -3569 6 627 795 279 30 33 chrU 5616368 5616701 -4432336 - BLASTOPIA_I LTR Gypsy -551 3930 3599 6 627 1868 332 22 18 chrU 5616802 5617804 -4431233 - DM1731_I LTR Copia -678 3298 2293 6 627 262 239 56 0 chrU 5618036 5618107 -4430930 - DM1731_I LTR Copia -1838 2138 2064 6 627 1141 69 0 0 chrU 5618115 5618259 -4430778 - DMRT1B LINE R1 -1613 3570 3427 6 627 2458 63 57 0 chrU 5618243 5618576 -4430461 - DMRT1B LINE R1 -1889 3294 2943 6 627 3378 77 106 3 chrU 5618572 5619282 -4429755 - DMRT1B LINE R1 -2499 2684 1902 6 627 853 326 60 16 chrU 5619296 5619979 -4429058 - DM1731_I LTR Copia -2084 1892 1180 6 627 2022 26 0 0 chrU 5620038 5620264 -4428773 - PROTOP DNA P 0 4480 4255 6 627 478 58 138 9 chrU 5620262 5620414 -4428623 - PROTOP DNA P -3736 744 546 6 627 1436 30 12 0 chrU 5620411 5620580 -4428457 - PROTOP DNA P -4310 170 1 6 627 6261 97 35 88 chrU 5620580 5621681 -4427356 - MICROPIA_I LTR Gypsy -44 4432 3391 6 627 327 0 0 0 chrU 5621698 5621742 -4427295 - PROTOP DNA P -2040 2440 2397 6 627 189 26 0 73 chrU 5621765 5621806 -4427231 + (TAA)n Simple_repeat Simple_repeat 3 40 0 6 627 6172 28 25 0 chrU 5621806 5622556 -4426481 - PROTOP DNA P -3711 769 1 6 627 371 329 14 20 chrU 5622935 5623081 -4425956 - DM1731_I LTR Copia -3316 660 516 6 627 14356 16 14 0 chrU 5623196 5624826 -4424211 + Gypsy4_I LTR Gypsy 3538 5190 -1098 6 627 459 75 250 0 chrU 5624839 5624919 -4424118 - DNAREP1_DM LINE Penelope 0 594 495 6 627 2902 54 98 45 chrU 5624920 5625390 -4423647 + DM176_LTR LTR Gypsy 1 481 -26 6 627 844 188 78 17 chrU 5625391 5625570 -4423467 - DNAREP1_DM LINE Penelope -104 490 301 6 627 728 156 92 18 chrU 5625593 5625756 -4423281 - DNAREP1_DM LINE Penelope -248 346 172 6 627 960 307 61 3 chrU 5625774 5626101 -4422936 + Gypsy3_I LTR Gypsy 5374 5719 -458 6 627 7903 71 85 0 chrU 5626831 5628617 -4420420 - BS LINE Jockey -5 5121 3128 6 627 811 106 0 8 chrU 5628623 5628747 -4420290 - BS LINE Jockey -3160 1966 1844 6 627 5358 65 7 4 chrU 5628743 5629433 -4419604 - BS LINE Jockey -3742 1384 693 6 627 3274 143 12 18 chrU 5629533 5630097 -4418940 + TAHRE LINE telomeric 9903 10463 0 6 627 51974 0 0 0 chrU 5630086 5635726 -4413311 + TAHRE LINE telomeric 1 5640 -4823 6 78 11346 36 83 0 chrU 5635826 5637228 -4411809 - DMCR1A LINE CR1 -1893 2577 1060 6 628 3860 40 207 13 chrU 5637236 5637922 -4411115 - DMCR1A LINE CR1 -3651 819 1 6 628 1508 274 53 8 chrU 5637929 5638401 -4410636 + Gypsy6_I LTR Gypsy 4810 5235 -1777 6 628 3043 309 64 35 chrU 5638392 5639727 -4409310 + Gypsy2_I LTR Gypsy 4754 6126 -9 6 628 3153 40 26 0 chrU 5639728 5640105 -4408932 + Gypsy6A_LTR LTR Gypsy 1 387 -33 6 628 411 0 0 0 chrU 5640105 5640153 -4408884 + S2_DM DNA Tc1 1688 1735 0 6 628 2415 132 31 28 chrU 5640210 5640632 -4408405 + Invader1_LTR LTR Gypsy 1 423 0 6 628 21 89 0 0 chrU 5640708 5640764 -4408273 + AT_rich Low_complexity Low_complexity 1 56 0 6 628 3442 79 36 49 chrU 5640946 5641477 -4407560 + CIRCE LINE Composite 3516 4039 -2317 6 628 3312 83 8 30 chrU 5641476 5641982 -4407055 + CIRCE LINE Composite 4286 4780 -1576 6 628 8488 22 31 1 chrU 5642082 5643643 -4405394 + ACCORD2_I LTR Gypsy 5594 7201 -11 6 628 1894 9 5 18 chrU 5643643 5643861 -4405176 + ACCORD2_LTR LTR Gypsy 1 215 0 6 628 6529 45 68 1 chrU 5643861 5645353 -4403684 + BS2 LINE Jockey 2925 4516 -205 6 628 1004 102 25 22 chrU 5645345 5645525 -4403512 + BS2 LINE Jockey 4567 4720 -1 6 628 1380 216 57 0 chrU 5645526 5645859 -4403178 - DM297_I LTR Gypsy -2629 3538 3187 6 628 708 182 0 0 chrU 5646224 5646345 -4402692 - TOM_I LTR Gypsy -1828 4284 4164 6 628 772 206 36 54 chrU 5646379 5646600 -4402437 + Gypsy_LTR LTR Gypsy 29 245 -237 6 628 941 186 52 88 chrU 5646639 5646911 -4402126 + BS2 LINE Jockey 57 318 -4403 6 628 772 131 51 5 chrU 5646944 5647093 -4401944 - BS2 LINE Jockey 0 4721 4586 6 628 3784 39 11 0 chrU 5647106 5647548 -4401489 + HELENA_RT LINE Jockey 1 447 -870 6 628 1929 41 161 8 chrU 5647546 5647907 -4401130 + HELENA_RT LINE Jockey 709 1124 -193 6 628 2677 114 15 26 chrU 5648263 5651466 -4397571 - DMSAT6 Satellite Satellite -357 3169 1 6 628 2594 110 38 36 chrU 5651482 5652656 -4396381 - DMSAT6 Satellite Satellite 0 1175 1 6 628 2561 126 13 24 chrU 5652918 5654320 -4394717 - DMSAT6 Satellite Satellite -50 1386 1 6 628 852 321 35 14 chrU 5654448 5654871 -4394166 - Copia_I LTR Copia -4006 587 156 6 628 469 155 0 0 chrU 5655490 5655561 -4393476 - TAHRE LINE telomeric -2867 7596 7526 6 628 584 275 18 18 chrU 5655832 5656058 -4392979 - Copia_I LTR Copia -2314 2279 2054 6 628 1100 320 54 40 chrU 5656561 5657341 -4391696 + HMSBEAGLE_I LTR Gypsy 2585 3375 -3154 6 628 2699 318 20 13 chrU 5657345 5658559 -4390478 + HMSBEAGLE_I LTR Gypsy 3841 5062 -1467 6 628 980 278 11 11 chrU 5658566 5658919 -4390118 + HMSBEAGLE_I LTR Gypsy 5420 5772 -757 6 628 28 0 0 0 chrU 5658922 5658950 -4390087 + AT_rich Low_complexity Low_complexity 1 28 0 6 628 239 259 0 105 chrU 5660366 5660461 -4388576 + HMSBEAGLE_I LTR Gypsy 6445 6529 0 6 628 12634 21 23 3 chrU 5660561 5662651 -4386386 - ROO_I LTR Pao -4094 4162 2030 6 628 1270 106 0 11 chrU 5662653 5662844 -4386193 + Gypsy8_LTR LTR Gypsy 1 189 -115 6 628 1153 48 0 7 chrU 5663260 5663408 -4385629 - ROO_I LTR Pao -6213 2043 1897 6 628 1509 40 20 0 chrU 5663409 5663608 -4385429 - ROO_I LTR Pao -7113 1143 941 6 628 386 63 0 0 chrU 5663633 5663696 -4385341 - ROO_I LTR Pao -7414 842 780 6 628 1928 325 67 68 chrU 5664665 5666581 -4382456 + NOMAD_I LTR Gypsy 547 2460 -4112 6 628 690 165 0 8 chrU 5666682 5666816 -4382221 - ARS406_DM Unknown Unknown -220 133 1 6 628 3947 198 34 19 chrU 5666709 5669734 -4379303 + SAR_DM Satellite Satellite 1 3069 -242 6 628 702 153 44 0 chrU 5669733 5669870 -4379167 - ARS406_DM Unknown Unknown -210 143 1 6 628 4168 204 32 22 chrU 5669778 5672681 -4376356 + SAR_DM Satellite Satellite 1 2931 -203 6 628 3051 3 6 0 chrU 5672781 5673126 -4375911 + FW_DM LINE Jockey 4346 4692 0 6 628 2040 17 0 0 chrU 5673142 5673381 -4375656 + DM176_I LTR Gypsy 6182 6420 0 6 628 2319 14 0 78 chrU 5673381 5673688 -4375349 + DM176_LTR LTR Gypsy 1 283 -224 6 628 2156 20 16 0 chrU 5673689 5673942 -4375095 + DM176_LTR LTR Gypsy 251 507 0 6 628 451 66 66 0 chrU 5673942 5673994 -4375043 - STALKER4_LTR LTR Gypsy -138 264 209 6 628 2513 274 53 30 chrU 5674257 5675211 -4373826 - FROGGER_I LTR Copia -40 2037 1062 6 628 716 303 40 48 chrU 5675231 5675609 -4373428 - FROGGER_I LTR Copia -1283 794 420 6 628 254 252 39 63 chrU 5675892 5676019 -4373018 - Copia2_I LTR Copia -1941 2221 2098 6 628 264 170 0 0 chrU 5676052 5676099 -4372938 - Copia_I LTR Copia -2480 2113 2067 6 628 446 281 55 55 chrU 5676156 5676401 -4372636 - Copia2_I LTR Copia -2440 1722 1386 6 628 2473 82 37 37 chrU 5677113 5677520 -4371517 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 628 10165 33 2 29 chrU 5677549 5678769 -4370268 + Gypsy3_I LTR Gypsy 129 1316 -4861 6 628 468 0 0 0 chrU 5680474 5680525 -4368512 - DOC LINE Jockey -4643 82 32 6 628 22 0 0 0 chrU 5682940 5682962 -4366075 + AT_rich Low_complexity Low_complexity 1 22 0 6 628 21 57 0 0 chrU 5684149 5684184 -4364853 + AT_rich Low_complexity Low_complexity 1 35 0 6 628 1112 139 69 10 chrU 5684225 5684428 -4364609 - DNAREP1_DM LINE Penelope -358 236 22 6 628 32345 5 32 0 chrU 5684953 5688496 -4360541 - Gypsy_I LTR Gypsy -2851 3656 1 6 628 4215 25 4 2 chrU 5688494 5688975 -4360062 - Gypsy_LTR LTR Gypsy 0 482 1 6 628 1803 15 0 0 chrU 5688975 5689172 -4359865 - Invader4_LTR LTR Gypsy -149 197 1 6 628 1795 14 0 19 chrU 5689238 5689454 -4359583 - Copia2_I LTR Copia -2725 1437 1226 6 628 10160 6 5 0 chrU 5689438 5690555 -4358482 - Copia2_I LTR Copia -3039 1123 1 6 628 1781 5 0 0 chrU 5690555 5690753 -4358284 - Copia2_LTR_DM LTR Copia 0 198 1 6 628 1320 19 0 0 chrU 5690753 5690913 -4358124 - Copia2_I LTR Copia 0 4162 4003 6 628 714 114 9 0 chrU 5691033 5691138 -4357899 - DNAREP1_DM LINE Penelope -488 106 1 6 628 345 199 77 10 chrU 5691141 5691258 -4357779 + XDMR_DM Unknown Unknown 176 329 -32 6 628 262 228 118 11 chrU 5691246 5691339 -4357698 - SAR_DM Satellite Satellite -749 723 621 6 628 1431 164 208 0 chrU 5691336 5691634 -4357403 + TAHRE LINE telomeric 1767 2126 -8337 6 628 505 86 14 0 chrU 5691632 5691702 -4357335 + HETA LINE telomeric 2326 2396 -3685 6 628 5115 190 131 47 chrU 5691701 5693098 -4355939 + HETA LINE telomeric 2612 4126 -1955 6 628 1981 198 65 50 chrU 5693108 5693705 -4355332 + TART LINE telomeric 9065 9869 -4608 6 628 1049 206 169 60 chrU 5693674 5694088 -4354949 + HETA LINE telomeric 5338 5796 -285 6 628 25 0 0 0 chrU 5694136 5694161 -4354876 + AT_rich Low_complexity Low_complexity 1 25 0 6 628 1975 99 207 0 chrU 5695498 5695850 -4353187 - DNAREP1_DM LINE Penelope 0 594 170 6 628 391 205 12 0 chrU 5695875 5695958 -4353079 + XDMR_DM Unknown Unknown 166 249 -111 6 628 202 95 0 45 chrU 5696066 5696110 -4352927 + (GAGAA)n Simple_repeat Simple_repeat 1 42 0 6 628 2268 161 122 13 chrU 5696110 5696210 -4352827 + HETA LINE telomeric 1747 1854 -4227 6 628 207 0 0 0 chrU 5696210 5696233 -4352804 + (GACTG)n Simple_repeat Simple_repeat 1 23 0 6 628 2268 161 122 13 chrU 5696233 5696609 -4352428 + HETA LINE telomeric 1855 2275 -3806 6 628 2480 35 196 3 chrU 5696608 5696850 -4352187 - TART LINE telomeric -6445 8032 7791 6 628 324 83 0 0 chrU 5696850 5696898 -4352139 + (CTTTA)n Simple_repeat Simple_repeat 3 50 0 6 628 2480 35 196 3 chrU 5696898 5697001 -4352036 - TART LINE telomeric -6687 7790 7621 6 628 26 30 0 0 chrU 5699261 5699294 -4349743 + AT_rich Low_complexity Low_complexity 1 33 0 6 628 21 0 0 0 chrU 5699886 5699907 -4349130 + AT_rich Low_complexity Low_complexity 1 21 0 6 628 996 250 114 12 chrU 5700359 5700683 -4348354 + NOMAD_I LTR Gypsy 3034 3390 -3182 6 628 329 275 155 28 chrU 5700703 5700845 -4348192 + NOMAD_I LTR Gypsy 3541 3700 -2872 6 628 777 348 23 17 chrU 5700879 5701361 -4347676 + NOMAD_I LTR Gypsy 4318 4802 -1770 6 628 404 311 13 7 chrU 5701387 5701539 -4347498 + NOMAD_I LTR Gypsy 4892 5044 -1528 6 628 432 315 12 18 chrU 5701543 5701711 -4347326 + NOMAD_I LTR Gypsy 5169 5335 -1237 6 628 9788 34 16 3 chrU 5701890 5703053 -4345984 - DMCR1A LINE CR1 0 4470 3292 6 628 707 317 40 25 chrU 5703167 5703520 -4345517 + Copia2_I LTR Copia 1487 1844 -2318 6 628 322 259 37 9 chrU 5703543 5703652 -4345385 + Copia2_I LTR Copia 2063 2174 -1988 6 628 2856 24 0 3 chrU 5703698 5704027 -4345010 + DOC2_DM LINE Jockey 2530 2857 -1936 6 628 1858 104 76 10 chrU 5704027 5704328 -4344709 - MAX_LTR LTR Pao 0 321 1 6 628 22193 198 15 30 chrU 5704328 5707756 -4341281 - MAX_I LTR Pao 0 7914 4537 6 628 9328 24 7 1 chrU 5707751 5708806 -4340231 - MAX_I LTR Pao -3747 4167 3107 6 628 1955 58 116 21 chrU 5708784 5709068 -4339969 - MAX_I LTR Pao -4997 2917 2607 6 628 2546 100 15 38 chrU 5710295 5710772 -4338265 + DMSAT6 Satellite Satellite 5 470 0 6 628 2532 113 12 31 chrU 5710788 5712556 -4336481 + DMSAT6 Satellite Satellite 1 1734 0 6 628 2638 116 25 17 chrU 5712575 5715059 -4333978 + DMSAT6 Satellite Satellite 1 2504 0 6 628 2543 17 0 0 chrU 5715159 5715446 -4333591 + R1_DM LINE R1 3996 4282 -1074 6 628 8377 24 2 0 chrU 5715466 5716414 -4332623 + R1_DM LINE R1 4407 5356 0 6 628 21296 35 31 1 chrU 5716447 5720605 -4328432 + R1_DM LINE R1 1 4282 -1074 6 628 3279 25 0 0 chrU 5720625 5720991 -4328046 + R1_DM LINE R1 4407 4772 -584 6 628 731 206 0 6 chrU 5721091 5721272 -4327765 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 628 1064 123 0 22 chrU 5721311 5721494 -4327543 + (CATA)n Simple_repeat Simple_repeat 2 180 0 6 628 834 189 0 0 chrU 5721492 5721672 -4327365 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 628 474 194 0 21 chrU 5721673 5721768 -4327269 + (CATA)n Simple_repeat Simple_repeat 4 96 0 6 628 1158 139 0 0 chrU 5721770 5722131 -4326906 + (TA)n Simple_repeat Simple_repeat 1 361 0 6 628 4678 49 12 14 chrU 5722134 5722717 -4326320 - DOC3_DM LINE Jockey -4158 582 1 6 628 2760 49 56 17 chrU 5722727 5723139 -4325898 - TRANSIB4 DNA Transib -1556 1054 627 6 628 1916 83 65 16 chrU 5723152 5723516 -4325521 - TRANSIB4 DNA Transib -2067 543 2 6 628 549 292 104 31 chrU 5723612 5724021 -4325016 - IDEFIX_I LTR Gypsy -2876 3087 2541 6 628 22 56 0 0 chrU 5724021 5724057 -4324980 + AT_rich Low_complexity Low_complexity 1 36 0 6 628 978 327 76 13 chrU 5724460 5725593 -4323444 - Gypsy4_I LTR Gypsy -192 6096 4893 6 628 316 186 29 0 chrU 5725690 5725760 -4323277 - GTWIN_I LTR Gypsy -1548 4873 4802 6 628 946 315 92 21 chrU 5725769 5726397 -4322640 - Gypsy4_I LTR Gypsy -2507 5015 3996 6 628 882 183 80 90 chrU 5726398 5726710 -4322327 + TIRANT_LTR LTR Gypsy 1 309 -108 6 628 8634 7 1 0 chrU 5726963 5727961 -4321076 + LSU-rRNA_Dme rRNA rRNA 2902 3900 0 6 628 246 150 0 0 chrU 5728068 5728108 -4320929 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 628 27 29 0 0 chrU 5728121 5728155 -4320882 + AT_rich Low_complexity Low_complexity 1 34 0 6 628 246 150 0 0 chrU 5728160 5728200 -4320837 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 628 246 150 0 0 chrU 5728344 5728384 -4320653 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 628 246 150 0 0 chrU 5728436 5728476 -4320561 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 628 1438 33 18 32 chrU 5728549 5728768 -4320269 + NTS_DM Other Other 25 240 0 6 628 562 92 35 0 chrU 5728768 5728855 -4320182 + NTS_DM Other Other 1 90 -150 6 628 226 0 59 0 chrU 5729172 5729206 -4319831 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 628 394 183 33 50 chrU 5730672 5730793 -4318244 - Stalker2_I LTR Gypsy -6509 893 775 6 628 832 187 43 0 chrU 5731208 5731417 -4317620 - Stalker2_I LTR Gypsy -6943 459 242 6 628 276 73 0 0 chrU 5731614 5731655 -4317382 - Stalker2_I LTR Gypsy -7361 41 1 6 628 3069 8 14 0 chrU 5731655 5732022 -4317015 - Stalker3_LTR LTR Gypsy 0 372 1 6 628 5921 10 16 0 chrU 5732022 5732723 -4316314 + Gypsy6_I LTR Gypsy 4445 5156 -1856 6 628 751 256 13 1 chrU 5732823 5733118 -4315919 - TOM_I LTR Gypsy -504 5663 5308 6 628 2000 251 45 35 chrU 5733138 5733847 -4315190 - TOM_I LTR Gypsy -1122 4990 4275 6 628 2940 84 88 26 chrU 5733844 5734409 -4314628 + STALKER4_I LTR Gypsy 826 1425 -5105 6 628 694 108 0 0 chrU 5734404 5734506 -4314531 + STALKER4_LTR LTR Gypsy 286 387 -15 6 628 1021 276 43 0 chrU 5736639 5737037 -4312000 - TOM_I LTR Gypsy -390 5722 5308 6 628 1979 253 45 35 chrU 5737069 5737778 -4311259 - TOM_I LTR Gypsy -1122 4990 4275 6 628 3062 80 69 31 chrU 5737775 5738353 -4310684 + STALKER4_I LTR Gypsy 826 1425 -5105 6 628 697 75 0 0 chrU 5738348 5738442 -4310595 + STALKER4_LTR LTR Gypsy 286 379 -23 6 628 1208 96 18 50 chrU 5738625 5738844 -4310193 - Gypsy12_I LTR Gypsy -5334 212 1 6 628 6916 221 58 49 chrU 5738844 5741160 -4307877 - Gypsy12_LTR LTR Gypsy 0 2336 1 6 628 1168 196 85 36 chrU 5741182 5741547 -4307490 - TAHRE LINE telomeric -687 9776 9394 6 628 2537 26 0 6 chrU 5741567 5741879 -4307158 + G2_DM LINE Jockey 1075 1384 -1718 6 628 2785 236 41 59 chrU 5741874 5742940 -4306097 - Gypsy12_LTR LTR Gypsy -1289 1047 1 6 628 1333 186 137 25 chrU 5742940 5743414 -4305623 - HETA LINE telomeric -633 5448 4922 6 628 262 31 0 0 chrU 5743412 5743444 -4305593 - NTS_DM Other Other -207 33 2 6 628 1266 258 60 25 chrU 5743575 5744185 -4304852 + G_DM LINE Jockey 243 886 -3460 6 628 2290 39 0 0 chrU 5744285 5744570 -4304467 - R1_DM LINE R1 -837 4519 4235 6 628 4969 18 3 2 chrU 5744559 5745170 -4303867 - R1_DM LINE R1 -1255 4101 3490 6 628 15123 31 6 1 chrU 5745165 5747052 -4301985 - R1_DM LINE R1 -2371 2985 1089 6 628 4560 60 5 3 chrU 5747046 5747661 -4301376 - R1_DM LINE R1 -4740 616 1 6 628 12103 26 37 1 chrU 5747694 5749704 -4299333 - R1_DM LINE R1 0 5356 3275 6 628 1094 23 0 0 chrU 5749707 5749840 -4299197 - R1_DM LINE R1 -2214 3142 3010 6 628 328 127 0 16 chrU 5750333 5750397 -4298640 + DNAREP1_DM LINE Penelope 475 537 -57 6 628 21 0 0 0 chrU 5750460 5750481 -4298556 + AT_rich Low_complexity Low_complexity 1 21 0 6 628 3535 27 45 0 chrU 5750699 5751148 -4297889 - PROTOP_A DNA P 0 1105 637 6 628 3668 16 0 5 chrU 5751193 5751635 -4297402 - PROTOP_A DNA P -665 440 1 6 628 26 50 0 0 chrU 5751933 5751973 -4297064 + AT_rich Low_complexity Low_complexity 1 40 0 6 628 40 49 0 0 chrU 5752203 5752264 -4296773 + AT_rich Low_complexity Low_complexity 1 61 0 6 628 4672 50 106 74 chrU 5753733 5754595 -4294442 - ROO_I LTR Pao -7110 1146 258 6 628 21 0 0 0 chrU 5754696 5754717 -4294320 + AT_rich Low_complexity Low_complexity 1 21 0 6 628 1856 35 58 4 chrU 5755203 5755460 -4293577 - ROO_I LTR Pao -2366 5890 5620 6 628 5669 217 52 52 chrU 5755575 5757473 -4291564 + Gypsy12_LTR LTR Gypsy 417 2313 -23 6 628 756 207 212 49 chrU 5757485 5757888 -4291149 + TART LINE telomeric 9807 10491 -3986 6 628 4004 39 4 0 chrU 5758037 5758547 -4290490 + PROTOP DNA P 1 512 -3968 6 628 26 30 0 0 chrU 5758709 5758742 -4290295 + AT_rich Low_complexity Low_complexity 1 33 0 6 628 23 78 0 0 chrU 5758788 5758839 -4290198 + AT_rich Low_complexity Low_complexity 1 51 0 6 628 22 88 0 0 chrU 5758877 5758934 -4290103 + AT_rich Low_complexity Low_complexity 1 57 0 6 628 226 27 216 0 chrU 5760003 5760040 -4288997 + PROTOP_B DNA P 1 45 -1108 6 628 2883 110 64 0 chrU 5760046 5760502 -4288535 + Gypsy12_I LTR Gypsy 2449 2933 -2613 6 628 3945 87 0 0 chrU 5760503 5761043 -4287994 + Gypsy12_I LTR Gypsy 4241 4780 -766 6 628 4595 98 10 1 chrU 5761145 5761826 -4287211 - HETA LINE telomeric -3215 2866 2180 6 628 2812 26 3 0 chrU 5761858 5762203 -4286834 - Invader4_LTR LTR Gypsy 0 346 1 6 628 6910 233 25 42 chrU 5762203 5766608 -4282429 - Invader4_I LTR Gypsy -600 3876 112 6 78 6008 32 7 1 chrU 5766708 5767483 -4281554 + TART_B1 LINE telomeric 9751 10529 -125 6 629 40110 4 0 1 chrU 5767488 5772171 -4276866 + TART_B1 LINE telomeric 3647 8326 -2328 6 629 387 343 32 32 chrU 5772271 5772554 -4276483 - DIVER2_I LTR Pao -847 3300 3018 6 629 359 138 92 0 chrU 5773063 5773128 -4275909 - G3_DM LINE Jockey -4026 579 509 6 629 497 126 0 11 chrU 5773223 5773311 -4275726 - G3_DM LINE Jockey -4416 189 103 6 629 733 165 22 22 chrU 5774464 5774638 -4274399 - DNAREP1_DM LINE Penelope -362 232 59 6 629 3320 41 2 0 chrU 5774638 5775057 -4273980 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 629 1504 77 180 14 chrU 5775116 5775394 -4273643 + DOC3_DM LINE Jockey 1 324 -4416 6 629 238 224 0 29 chrU 5775874 5775901 -4273136 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 6 629 189 0 0 0 chrU 5775901 5775922 -4273115 + (GAAAA)n Simple_repeat Simple_repeat 4 24 0 6 629 238 224 0 29 chrU 5775922 5775963 -4273074 + (TATATG)n Simple_repeat Simple_repeat 5 43 0 6 629 26 0 0 0 chrU 5776049 5776075 -4272962 + AT_rich Low_complexity Low_complexity 1 26 0 6 629 2735 53 29 44 chrU 5776080 5776493 -4272544 + Gypsy6_LTR LTR Gypsy 1 407 0 6 629 27 73 0 0 chrU 5776978 5777033 -4272004 + AT_rich Low_complexity Low_complexity 1 55 0 6 629 9910 157 20 8 chrU 5777802 5779651 -4269386 + DMRT1B LINE R1 3287 5174 -9 6 629 1433 283 87 64 chrU 5779894 5780811 -4268226 + DMRT1A LINE R1 3 940 -4243 6 629 663 267 116 11 chrU 5780905 5781352 -4267685 + DMRT1A LINE R1 1272 1788 -3395 6 629 2787 213 22 14 chrU 5781380 5781957 -4267080 + DMRT1A LINE R1 2037 2618 -2565 6 629 1671 193 179 0 chrU 5781958 5782337 -4266700 + DMRT1A LINE R1 2725 3171 -2012 6 629 2445 184 80 2 chrU 5782336 5782639 -4266398 + DMRT1A LINE R1 3300 3639 -1544 6 629 189 74 0 0 chrU 5782639 5782666 -4266371 + (CATA)n Simple_repeat Simple_repeat 3 29 0 6 629 2445 210 206 1 chrU 5782666 5783175 -4265862 + DMRT1A LINE R1 3640 4240 -943 6 629 3315 75 0 0 chrU 5783292 5783732 -4265305 + IDEFIX_I LTR Gypsy 661 1100 -4528 6 629 3941 66 158 3 chrU 5783727 5785160 -4263877 + IDEFIX_I LTR Gypsy 1377 3063 -2565 6 629 10545 100 75 0 chrU 5785143 5786777 -4262260 + IDEFIX_I LTR Gypsy 3593 5349 -279 6 629 568 64 51 0 chrU 5786898 5786976 -4262061 + IDEFIX_I LTR Gypsy 5547 5628 0 6 629 2137 59 10 3 chrU 5786976 5787264 -4261773 + IDEFIX_LTR LTR Gypsy 1 290 -304 6 629 616 73 10 0 chrU 5787265 5787361 -4261676 + IDEFIX_LTR LTR Gypsy 498 594 0 6 629 364 241 8 41 chrU 5787361 5787458 -4261579 + STALKER4_LTR LTR Gypsy 283 375 -27 6 629 1591 195 76 10 chrU 5787739 5788132 -4260905 + Stalker2_I LTR Gypsy 390 808 -6594 6 629 2493 122 115 23 chrU 5788116 5788672 -4260365 + STALKER4_I LTR Gypsy 872 1478 -5052 6 629 18435 33 7 18 chrU 5788772 5790990 -4258047 - MAX_I LTR Pao -223 7691 5497 6 629 1121 31 0 0 chrU 5790989 5791116 -4257921 - MAX_I LTR Pao -2253 5661 5535 6 629 6077 35 117 0 chrU 5791136 5792265 -4256772 - MAX_I LTR Pao -2121 5793 4533 6 629 12351 30 0 0 chrU 5792264 5793668 -4255369 - MAX_I LTR Pao -4128 3786 2383 6 629 4103 24 0 0 chrU 5793669 5794132 -4254905 - MAX_I LTR Pao -5660 2254 1792 6 629 798 129 57 14 chrU 5794232 5794373 -4254664 - G3_DM LINE Jockey -4377 228 82 6 629 257 299 30 54 chrU 5794233 5794399 -4254638 - DIVER2_I LTR Pao -2932 1215 1054 6 629 2437 87 167 18 chrU 5795074 5795693 -4253344 - DOC4_DM LINE Jockey 0 2791 2081 6 629 374 205 5 5 chrU 5795752 5795835 -4253202 - FW2_DM LINE Jockey -2510 1451 1378 6 629 2022 68 222 16 chrU 5795843 5796295 -4252742 - DOC4_DM LINE Jockey -1040 1751 1207 6 629 4235 35 0 0 chrU 5796307 5796797 -4252240 + DMCR1A LINE CR1 3058 3547 -923 6 629 302 313 49 34 chrU 5796892 5797185 -4251852 + Gypsy_DS LTR Gypsy 3027 3402 -3170 6 629 633 165 79 0 chrU 5797132 5797296 -4251741 + TLD2 Unknown Unknown 10 186 -32 6 629 227 312 131 29 chrU 5797608 5797783 -4251254 + Gypsy4_I LTR Gypsy 3281 3473 -2815 6 629 443 196 62 74 chrU 5799701 5799877 -4249160 - Gypsy3_LTR LTR Gypsy -113 285 112 6 629 26 50 0 0 chrU 5800056 5800096 -4248941 + AT_rich Low_complexity Low_complexity 1 40 0 6 629 7708 30 59 83 chrU 5800292 5801424 -4247613 + PROTOP_A DNA P 1 1105 0 6 629 235 299 0 0 chrU 5801491 5801558 -4247479 - Gypsy_DS LTR Gypsy -816 6706 6640 6 629 8532 299 52 19 chrU 5801693 5804978 -4244059 - Gypsy_I LTR Gypsy -680 5827 2435 6 629 38238 14 18 23 chrU 5805088 5809535 -4239502 + Gypsy2_I LTR Gypsy 1704 6131 -4 6 629 3239 11 0 0 chrU 5809543 5809896 -4239141 + Gypsy2_LTR LTR Gypsy 1 353 0 6 629 268 255 103 48 chrU 5809896 5810061 -4238976 - DM412 LTR Gypsy -28 6869 6696 6 629 192 40 0 0 chrU 5810108 5810133 -4238904 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6 629 1382 176 4 4 chrU 5810144 5810395 -4238642 - DM412 LTR Gypsy -600 6297 6047 6 629 3430 25 52 9 chrU 5812831 5813468 -4235569 + CIRCE LINE Composite 3515 4267 -2089 6 629 1698 21 0 0 chrU 5813459 5813651 -4235386 + CIRCE LINE Composite 4789 4980 -1376 6 629 4337 53 6 4 chrU 5814679 5815546 -4233491 - IDEFIX_I LTR Gypsy -4655 973 1 6 629 2387 123 0 16 chrU 5815876 5816240 -4232797 - IDEFIX_I LTR Gypsy -2655 2973 2616 6 629 1354 123 42 0 chrU 5816259 5816471 -4232566 - IDEFIX_I LTR Gypsy -3135 2493 2273 6 629 11922 151 35 24 chrU 5816471 5818552 -4230485 - IDEFIX_I LTR Gypsy -3476 2152 48 6 629 30 19 0 54 chrU 5818560 5818616 -4230421 + AT_rich Low_complexity Low_complexity 1 53 0 6 629 2837 116 10 69 chrU 5818841 5819362 -4229675 - IDEFIX_LTR LTR Gypsy 0 594 105 6 629 483 299 103 23 chrU 5820261 5820562 -4228475 + OSVALDO_I LTR Gypsy 1965 2289 -4364 6 629 15613 25 0 0 chrU 5821245 5823032 -4226005 + FW_DM LINE Jockey 13 1799 -2893 6 629 3519 29 31 0 chrU 5823032 5823447 -4225590 + ROO_LTR LTR Pao 1 428 0 6 629 435 121 61 0 chrU 5823450 5823516 -4225521 - HETRP_DM Satellite Satellite -285 1587 1518 6 629 783 189 6 19 chrU 5823618 5823774 -4225263 - HETRP_DM Satellite Satellite -190 1682 1529 6 629 732 203 6 19 chrU 5823929 5824085 -4224952 - HETRP_DM Satellite Satellite -190 1682 1529 6 629 682 200 7 14 chrU 5824227 5824369 -4224668 - HETRP_DM Satellite Satellite -203 1669 1529 6 629 690 201 13 25 chrU 5824520 5824678 -4224359 - HETRP_DM Satellite Satellite -188 1684 1529 6 629 687 185 7 15 chrU 5824831 5824968 -4224069 - HETRP_DM Satellite Satellite -208 1664 1529 6 629 561 210 8 16 chrU 5825121 5825247 -4223790 - HETRP_DM Satellite Satellite -208 1664 1540 6 629 180 0 0 0 chrU 5825247 5825267 -4223770 + (TC)n Simple_repeat Simple_repeat 2 21 0 6 629 635 214 7 14 chrU 5825398 5825540 -4223497 - HETRP_DM Satellite Satellite -203 1669 1529 6 629 682 208 13 25 chrU 5825693 5825851 -4223186 - HETRP_DM Satellite Satellite -188 1684 1529 6 629 682 208 13 25 chrU 5826002 5826160 -4222877 - HETRP_DM Satellite Satellite -188 1684 1529 6 629 682 200 7 14 chrU 5826329 5826471 -4222566 - HETRP_DM Satellite Satellite -203 1669 1529 6 629 4204 13 4 0 chrU 5826574 5827045 -4221992 - PROTOP_A DNA P -632 473 1 6 629 3305 121 104 3 chrU 5827045 5827749 -4221288 - STALKER4_I LTR Gypsy -892 5444 4666 6 629 1142 91 85 6 chrU 5827748 5827925 -4221112 - STALKER4_I LTR Gypsy -1741 4789 4599 6 629 14136 158 43 16 chrU 5827966 5830511 -4218526 - Stalker2_I LTR Gypsy -2726 4676 1741 6 629 4355 181 69 45 chrU 5830510 5831560 -4217477 - Stalker2_I LTR Gypsy -5215 1315 241 6 629 21 36 0 0 chrU 5831571 5831599 -4217438 + AT_rich Low_complexity Low_complexity 1 28 0 6 629 511 138 0 41 chrU 5831617 5831715 -4217322 - BS LINE Jockey -6 5120 5027 6 629 395 94 0 0 chrU 5831710 5831763 -4217274 - Invader2_LTR LTR Gypsy -30 236 184 6 629 1095 17 0 0 chrU 5831863 5831983 -4217054 - PROTOP_A DNA P -985 120 1 6 629 457 113 112 33 chrU 5831983 5832147 -4216890 - MAX_I LTR Pao -7408 506 286 6 629 8342 332 18 4 chrU 5832141 5833773 -4215264 + FB4_DM DNA Tc1 1106 2760 -1329 6 629 1685 50 122 104 chrU 5833765 5834053 -4214984 - MAX_I LTR Pao -7621 293 1 6 629 1918 113 70 0 chrU 5834053 5834353 -4214684 - MAX_LTR LTR Pao 0 321 1 6 629 1642 306 98 43 chrU 5834353 5835350 -4213687 - MICROPIA_I LTR Gypsy -2518 1958 907 6 629 424 299 57 43 chrU 5835395 5835626 -4213411 - MICROPIA_I LTR Gypsy -3104 230 1 6 629 283 291 94 29 chrU 5835733 5835871 -4213166 - ACCORD2_I LTR Gypsy -6540 672 526 6 629 235 297 184 19 chrU 5836274 5836432 -4212605 - BLASTOPIA_I LTR Gypsy -1 4480 4297 6 629 21 71 0 0 chrU 5836485 5836527 -4212510 + AT_rich Low_complexity Low_complexity 1 42 0 6 629 248 320 2 2 chrU 5836913 5837044 -4211993 - MDG3_I LTR Gypsy -1413 3475 3330 6 629 2731 3 7 0 chrU 5837145 5837453 -4211584 - QUASIMODO_LTR LTR Gypsy -348 310 1 6 629 366 174 86 75 chrU 5837453 5837629 -4211408 + ACCORD2_I LTR Gypsy 1894 2071 -5141 6 629 3575 86 75 30 chrU 5837610 5838172 -4210865 + ACCORD2_I LTR Gypsy 2285 2871 -4341 6 629 978 294 84 17 chrU 5839309 5839845 -4209192 + Copia_I LTR Copia 1708 2279 -2314 6 629 506 294 40 0 chrU 5840419 5840667 -4208370 + Copia_I LTR Copia 3397 3654 -939 6 629 932 288 56 42 chrU 5840696 5841215 -4207822 + Copia_I LTR Copia 3715 4240 -353 6 629 293 260 28 28 chrU 5841376 5841483 -4207554 + Invader6_I LTR Gypsy 2456 2562 -1537 6 629 755 0 0 0 chrU 5841496 5841578 -4207459 + STALKER4_LTR LTR Gypsy 1 82 -320 6 629 1798 38 0 5 chrU 5841578 5841792 -4207245 + STALKER4_LTR LTR Gypsy 189 401 -1 6 629 314 26 26 0 chrU 5841802 5841828 -4207209 + STALKER4_I LTR Gypsy 1 27 -6503 6 629 298 115 0 37 chrU 5841828 5841882 -4207155 + Stalker2_I LTR Gypsy 1 52 -7350 6 629 995 179 80 0 chrU 5842031 5842243 -4206794 + Stalker2_I LTR Gypsy 242 470 -6932 6 629 4833 169 105 39 chrU 5842347 5843300 -4205737 + HMSBEAGLE_I LTR Gypsy 1858 2873 -3656 6 629 318 215 0 0 chrU 5843303 5843368 -4205669 + HMSBEAGLE_I LTR Gypsy 3465 3529 -3000 6 629 1054 75 0 0 chrU 5843360 5843493 -4205544 + HMSBEAGLE_I LTR Gypsy 3859 3991 -2538 6 629 1274 119 0 0 chrU 5843486 5843663 -4205374 + HMSBEAGLE_I LTR Gypsy 4539 4715 -1814 6 629 2155 94 47 30 chrU 5843666 5844027 -4205010 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 629 333 111 19 0 chrU 5844027 5844081 -4204956 + ROVER-I_DM LTR Gypsy 1 55 -6529 6 629 2029 234 122 9 chrU 5844079 5844861 -4204176 + G6_DM LINE Jockey 931 1851 -2495 6 629 1527 148 268 2 chrU 5845116 5845519 -4203518 + DMCR1A LINE CR1 2114 2624 -1846 6 629 243 94 0 0 chrU 5845519 5845551 -4203486 - DNAREP1_DM LINE Penelope 0 594 563 6 629 611 200 73 17 chrU 5845584 5845762 -4203275 - DNAREP1_DM LINE Penelope -259 335 148 6 629 521 200 192 0 chrU 5845751 5845871 -4203166 + DMCR1A LINE CR1 2719 2861 -1609 6 629 2789 98 18 30 chrU 5847504 5849653 -4199384 + DMSAT6 Satellite Satellite 1 2121 -40 6 629 2749 104 14 26 chrU 5850172 5852564 -4196473 + DMSAT6 Satellite Satellite 1 2364 -74 6 629 28638 23 10 6 chrU 5852664 5855975 -4193062 + R1_DM LINE R1 2033 5356 0 6 629 13831 49 12 9 chrU 5856008 5857721 -4191316 + R1_DM LINE R1 1 1718 -3638 6 629 830 139 3 18 chrU 5857832 5858163 -4190874 + RSP Satellite Satellite 1 326 0 6 629 930 98 21 19 chrU 5858203 5859487 -4189550 + RSP Satellite Satellite 1 1286 0 6 629 942 115 8 22 chrU 5859504 5862283 -4186754 + RSP Satellite Satellite 1 2738 0 6 629 873 85 0 14 chrU 5862323 5862603 -4186434 + RSP Satellite Satellite 1 276 0 6 629 861 91 0 9 chrU 5862643 5862847 -4186190 + RSP Satellite Satellite 1 202 0 6 629 13646 139 14 20 chrU 5862947 5865662 -4183375 + BATUMI_I LTR Pao 4910 7836 -78 6 629 339 20 0 57 chrU 5865720 5865773 -4183264 + BATUMI_I LTR Pao 6999 7048 -915 6 629 621 28 0 0 chrU 5865776 5865847 -4183190 + BATUMI_I LTR Pao 7216 7286 -677 6 629 631 276 69 22 chrU 5865851 5866229 -4182808 - QUASIMODO_I LTR Gypsy -4400 1660 1029 6 629 645 315 17 17 chrU 5866448 5866742 -4182295 - TV1I LTR Gypsy -5101 862 569 6 629 13702 17 8 1 chrU 5868047 5869601 -4179436 - FW_DM LINE Jockey -163 4529 2966 6 629 6237 65 34 5 chrU 5869605 5870441 -4178596 - MDG1_I LTR Gypsy -1897 4699 3840 6 629 2152 55 0 4 chrU 5870432 5870706 -4178331 - MDG1_I LTR Gypsy -2881 3715 3443 6 629 2532 56 0 0 chrU 5870702 5871021 -4178016 - MDG1_I LTR Gypsy -3922 2674 2356 6 629 229 231 12 25 chrU 5871080 5871160 -4177877 - MDG1_LTR LTR Gypsy -68 374 296 6 629 2859 94 21 7 chrU 5871170 5871600 -4177437 - MDG1_I LTR Gypsy -4944 1652 1217 6 629 47 0 0 0 chrU 5872111 5872158 -4176879 + AT_rich Low_complexity Low_complexity 1 47 0 6 629 396 271 62 25 chrU 5873147 5873404 -4175633 + TV1I LTR Gypsy 1160 1461 -4599 6 629 420 258 25 24 chrU 5873596 5873758 -4175279 + TV1I LTR Gypsy 1853 1972 -4088 6 629 3693 246 8 7 chrU 5873808 5874724 -4174313 + TV1I LTR Gypsy 2056 2972 -2991 6 629 1819 269 128 22 chrU 5874718 5875667 -4173370 + QUASIMODO_I LTR Gypsy 3144 4192 -1868 6 629 39 38 0 0 chrU 5875667 5875720 -4173317 + AT_rich Low_complexity Low_complexity 1 53 0 6 629 1440 280 66 81 chrU 5875782 5877036 -4172001 + QUASIMODO_I LTR Gypsy 4431 5666 -394 6 629 3363 33 5 19 chrU 5877634 5878062 -4170975 - IDEFIX_LTR LTR Gypsy 0 594 173 6 629 590 0 0 14 chrU 5878064 5878137 -4170900 - IDEFIX_I LTR Gypsy -80 5548 5477 6 629 40 37 0 0 chrU 5878238 5878292 -4170745 + AT_rich Low_complexity Low_complexity 1 54 0 6 629 21 0 0 0 chrU 5878466 5878487 -4170550 + AT_rich Low_complexity Low_complexity 1 21 0 6 629 21 36 0 0 chrU 5878895 5878923 -4170114 + AT_rich Low_complexity Low_complexity 1 28 0 6 629 192 40 0 0 chrU 5878923 5878948 -4170089 + (TTA)n Simple_repeat Simple_repeat 1 25 0 6 629 36 0 0 0 chrU 5879066 5879102 -4169935 + AT_rich Low_complexity Low_complexity 1 36 0 6 629 1628 111 4 4 chrU 5879354 5879598 -4169439 + BS2 LINE Jockey 14 257 -4464 6 629 1920 44 12 8 chrU 5879597 5879851 -4169186 - G5_DM LINE Jockey 0 4856 4602 6 629 3283 48 5 0 chrU 5879848 5880242 -4168795 - G5_DM LINE Jockey -489 4367 3972 6 629 21 0 0 0 chrU 5880273 5880294 -4168743 + AT_rich Low_complexity Low_complexity 1 21 0 6 629 261 98 18 73 chrU 5880318 5880373 -4168664 - DNAREP1_DM LINE Penelope -527 67 16 6 629 42 57 0 0 chrU 5880491 5880561 -4168476 + AT_rich Low_complexity Low_complexity 1 70 0 6 629 253 136 23 0 chrU 5880875 5880919 -4168118 + BS2 LINE Jockey 81 125 -4596 6 629 6779 36 5 0 chrU 5880907 5881701 -4167336 - G5_DM LINE Jockey -87 4769 3972 6 629 21 0 0 0 chrU 5881732 5881753 -4167284 + AT_rich Low_complexity Low_complexity 1 21 0 6 629 39 68 0 0 chrU 5882087 5882161 -4166876 + AT_rich Low_complexity Low_complexity 1 74 0 6 629 216 0 0 0 chrU 5882162 5882186 -4166851 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 629 21 0 0 0 chrU 5882634 5882655 -4166382 + AT_rich Low_complexity Low_complexity 1 21 0 6 629 192 40 0 0 chrU 5883090 5883115 -4165922 + (TTA)n Simple_repeat Simple_repeat 1 25 0 6 629 3075 25 14 3 chrU 5883323 5883686 -4165351 - DMCR1A LINE CR1 -1907 2563 2197 6 629 229 355 35 7 chrU 5884364 5884506 -4164531 - Gypsy5_I LTR Gypsy -5462 1047 902 6 629 28 0 0 0 chrU 5884664 5884692 -4164345 + AT_rich Low_complexity Low_complexity 1 28 0 6 629 225 238 12 48 chrU 5885283 5885367 -4163670 + (CATATA)n Simple_repeat Simple_repeat 4 84 0 6 629 25 31 0 0 chrU 5885549 5885581 -4163456 + AT_rich Low_complexity Low_complexity 1 32 0 6 629 466 339 0 0 chrU 5885864 5886032 -4163005 + OSVALDO_I LTR Gypsy 2366 2533 -4120 6 629 492 286 22 22 chrU 5886043 5886265 -4162772 + OSVALDO_I LTR Gypsy 2588 2809 -3844 6 629 6271 282 60 33 chrU 5886261 5887638 -4161399 + Gypsy8_I LTR Gypsy 1167 2563 -1784 6 629 189 0 0 0 chrU 5887638 5887659 -4161378 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 629 6271 282 60 33 chrU 5887659 5887695 -4161342 + Gypsy8_I LTR Gypsy 2564 2617 -1730 6 629 3479 33 35 0 chrU 5887711 5888134 -4160903 + DMCR1A LINE CR1 3066 3503 -967 6 629 462 299 0 7 chrU 5888148 5888283 -4160754 + Gypsy5_I LTR Gypsy 2437 2570 -3939 6 629 380 342 83 58 chrU 5888569 5889564 -4159473 + BLASTOPIA_I LTR Gypsy 3541 4480 -1 6 629 621 316 72 72 chrU 5892372 5893290 -4155747 + BLASTOPIA_I LTR Gypsy 2073 3165 -1821 6 629 2697 101 17 35 chrU 5893441 5897142 -4151895 + DMSAT6 Satellite Satellite 1 3632 -3 6 78 2675 98 35 19 chrU 5897173 5898362 -4150675 + DMSAT6 Satellite Satellite 1 1208 0 6 630 243 88 0 0 chrU 5898462 5898496 -4150541 - HETRP_DM Satellite Satellite -310 1562 1529 6 630 713 191 13 26 chrU 5898646 5898802 -4150235 - HETRP_DM Satellite Satellite -190 1682 1529 6 630 723 195 13 25 chrU 5898924 5899082 -4149955 - HETRP_DM Satellite Satellite -188 1684 1529 6 630 741 209 6 19 chrU 5899206 5899362 -4149675 - HETRP_DM Satellite Satellite -190 1682 1529 6 630 691 196 11 69 chrU 5899490 5899665 -4149372 - HETRP_DM Satellite Satellite -190 1682 1518 6 630 642 221 13 25 chrU 5899793 5899951 -4149086 - HETRP_DM Satellite Satellite -188 1684 1529 6 630 705 193 7 14 chrU 5900089 5900231 -4148806 - HETRP_DM Satellite Satellite -203 1669 1529 6 630 692 185 7 15 chrU 5900376 5900513 -4148524 - HETRP_DM Satellite Satellite -208 1664 1529 6 630 533 212 15 29 chrU 5900636 5900772 -4148265 - HETRP_DM Satellite Satellite -190 1682 1549 6 630 300 27 0 0 chrU 5900772 5900809 -4148228 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 630 715 194 11 73 chrU 5900924 5901102 -4147935 - HETRP_DM Satellite Satellite -188 1684 1518 6 630 603 218 7 22 chrU 5901204 5901340 -4147697 - HETRP_DM Satellite Satellite -190 1682 1549 6 630 210 37 0 0 chrU 5901340 5901367 -4147670 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 630 685 204 13 26 chrU 5901511 5901667 -4147370 - HETRP_DM Satellite Satellite -190 1682 1529 6 630 537 241 7 29 chrU 5901803 5901940 -4147097 - HETRP_DM Satellite Satellite -190 1682 1549 6 630 210 37 0 0 chrU 5901940 5901967 -4147070 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 630 691 197 13 26 chrU 5902083 5902239 -4146798 - HETRP_DM Satellite Satellite -190 1682 1529 6 630 743 184 11 69 chrU 5902362 5902537 -4146500 - HETRP_DM Satellite Satellite -190 1682 1518 6 630 729 184 13 26 chrU 5902667 5902823 -4146214 - HETRP_DM Satellite Satellite -190 1682 1529 6 630 711 171 20 27 chrU 5902977 5903127 -4145910 - HETRP_DM Satellite Satellite -190 1682 1534 6 630 430 237 8 34 chrU 5903261 5903379 -4145658 - HETRP_DM Satellite Satellite -188 1684 1570 6 630 19592 2 0 1 chrU 5903479 5905585 -4143452 - CIRCE LINE Composite -4252 2104 1 6 630 25847 5 0 1 chrU 5905585 5908382 -4140655 - CIRCE LINE Composite 0 6356 3561 6 630 735 191 24 30 chrU 5908482 5908649 -4140388 - Gypsy12_LTR LTR Gypsy -1993 343 178 6 630 180 0 0 0 chrU 5909393 5909413 -4139624 + (TAAAAA)n Simple_repeat Simple_repeat 3 22 0 6 630 2564 387 35 19 chrU 5909686 5911289 -4137748 + Invader2_I LTR Gypsy 2245 3872 -720 6 630 547 185 242 13 chrU 5911300 5911453 -4137584 - Gypsy12_I LTR Gypsy -2974 2572 2385 6 630 922 172 124 15 chrU 5911466 5911667 -4137370 - Gypsy12_I LTR Gypsy -3217 2329 2107 6 630 322 197 0 15 chrU 5911683 5911750 -4137287 - Gypsy12_I LTR Gypsy -3629 1917 1852 6 630 13220 24 58 20 chrU 5911755 5913370 -4135667 + Gypsy12_I LTR Gypsy 208 1883 -3663 6 630 6912 8 3 3 chrU 5913470 5914235 -4134802 + SSU-rRNA_Dme rRNA rRNA 1061 1825 -170 6 630 3220 14 0 0 chrU 5914235 5914588 -4134449 - Gypsy2_LTR LTR Gypsy 0 353 1 6 630 1687 108 10 23 chrU 5914590 5914998 -4134039 - Gypsy2_I LTR Gypsy -8 6127 5768 6 630 8013 39 15 22 chrU 5914997 5916003 -4133034 + R1_DM LINE R1 3531 4529 -827 6 630 9503 183 57 57 chrU 5916003 5918339 -4130698 - Gypsy12_LTR LTR Gypsy 0 2336 1 6 630 1774 21 148 87 chrU 5918450 5918714 -4130323 - Gypsy3_LTR LTR Gypsy -118 280 1 6 630 42864 1 1 2 chrU 5918714 5923314 -4125723 - Gypsy3_I LTR Gypsy 0 6177 1581 6 630 4443 36 46 14 chrU 5923414 5923974 -4125063 - DOC3_DM LINE Jockey -4156 584 7 6 630 268 202 8 8 chrU 5923993 5924070 -4124967 - DM297_I LTR Gypsy -3742 2425 2372 6 630 15809 30 16 2 chrU 5924102 5925943 -4123094 - DMCR1A LINE CR1 -536 3934 2067 6 630 6631 87 62 62 chrU 5925944 5927096 -4121941 - PROTOP_B DNA P -1 1152 1 6 630 9733 38 15 0 chrU 5927096 5928243 -4120794 - DMCR1A LINE CR1 -2397 2073 910 6 630 3692 220 47 26 chrU 5928349 5929421 -4119616 - SAR_DM Satellite Satellite -242 1094 1 6 630 3180 205 31 35 chrU 5929460 5931263 -4117774 - SAR_DM Satellite Satellite -425 1796 1 6 630 3342 201 47 21 chrU 5931482 5933163 -4115874 + SAR_DM Satellite Satellite 1 1724 -203 6 630 3867 28 143 0 chrU 5933263 5933829 -4115208 + DIVER2_I LTR Pao 3501 4147 0 6 630 1433 38 166 6 chrU 5933829 5934161 -4114876 + DIVER2_LTR LTR Pao 1 385 0 6 630 7745 58 79 18 chrU 5934234 5935721 -4113316 + Copia2_I LTR Copia 40 1617 -2545 6 630 3453 60 85 0 chrU 5935703 5936234 -4112803 + Copia2_I LTR Copia 1860 2435 -1727 6 630 4199 89 15 0 chrU 5936245 5936783 -4112254 + Copia2_I LTR Copia 3452 3997 -165 6 630 4401 20 57 0 chrU 5937564 5938074 -4110963 - MAX_I LTR Pao -1562 6352 5814 6 630 16486 21 14 3 chrU 5938178 5940117 -4108920 - PROTOP DNA P -2082 2398 438 6 630 6527 1 3 0 chrU 5940115 5940860 -4108177 + I_DM LINE I 4724 5470 -761 6 630 2553 10 0 0 chrU 5940872 5941163 -4107874 - PROTOP DNA P -4034 446 156 6 630 16493 1 1 2 chrU 5941160 5942968 -4106069 - G2_DM LINE Jockey -1 3101 1297 6 630 4279 16 13 11 chrU 5943068 5943791 -4105246 - ACCORD_I LTR Gypsy -5765 523 1 6 630 4362 4 55 2 chrU 5943791 5944136 -4104901 - ACCORD_LTR LTR Gypsy 0 558 215 6 630 210 118 0 0 chrU 5944136 5944170 -4104867 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 630 4362 4 55 2 chrU 5944170 5944354 -4104683 - ACCORD_LTR LTR Gypsy -344 214 2 6 630 1394 198 116 51 chrU 5944569 5945290 -4103747 + Gypsy2_I LTR Gypsy 231 1089 -5046 6 630 3758 237 90 53 chrU 5945290 5946843 -4102194 + Gypsy12_LTR LTR Gypsy 1 1611 -725 6 630 2894 149 45 40 chrU 5946907 5947524 -4101513 + Gypsy12_LTR LTR Gypsy 1717 2336 0 6 630 2234 62 15 27 chrU 5947524 5947857 -4101180 + Gypsy12_I LTR Gypsy 1 329 -5217 6 630 5235 25 0 0 chrU 5947959 5948601 -4100436 + ACCORD2_I LTR Gypsy 2227 2868 -4344 6 630 10654 17 10 1 chrU 5948593 5949919 -4099118 + ACCORD2_I LTR Gypsy 5527 6864 -348 6 630 495 80 0 0 chrU 5949930 5950005 -4099032 + ACCORD2_I LTR Gypsy 7134 7208 -4 6 630 1799 9 0 18 chrU 5950005 5950224 -4098813 + ACCORD2_LTR LTR Gypsy 1 215 0 6 630 309 311 0 0 chrU 5950230 5950336 -4098701 - Copia2_I LTR Copia -3490 672 567 6 630 463 327 9 9 chrU 5950856 5951072 -4097965 - Gypsy4_I LTR Gypsy -2883 3538 3323 6 630 1412 29 38 0 chrU 5951083 5951293 -4097744 - TLD2 Unknown Unknown 0 218 1 6 630 687 321 28 19 chrU 5951131 5951685 -4097352 - Gypsy4_I LTR Gypsy -3773 3239 2296 6 630 602 75 0 8 chrU 5952842 5952964 -4096073 - DOC3_DM LINE Jockey -3933 807 647 6 630 34 0 0 0 chrU 5953203 5953237 -4095800 + AT_rich Low_complexity Low_complexity 1 34 0 6 630 278 240 75 75 chrU 5954564 5954724 -4094313 + Gypsy_DS LTR Gypsy 3008 3148 -4374 6 630 3583 54 84 97 chrU 5954840 5955481 -4093556 - DMCR1A LINE CR1 -23 4447 3815 6 630 2814 31 0 0 chrU 5955481 5955833 -4093204 + G5_DM LINE Jockey 4505 4856 0 6 630 855 52 0 0 chrU 5955836 5955952 -4093085 - DMCR1A LINE CR1 -647 3823 3708 6 630 4924 50 8 9 chrU 5955948 5956608 -4092429 - DMCR1A LINE CR1 -989 3481 2823 6 630 1636 51 248 0 chrU 5956608 5957000 -4092037 - DMCR1A LINE CR1 -1870 2600 2112 6 630 4514 49 50 14 chrU 5956997 5957622 -4091415 - DMCR1A LINE CR1 -2461 2009 1363 6 630 355 313 28 32 chrU 5958336 5958721 -4090316 - BURDOCK_I LTR Gypsy -4868 992 850 6 630 24 0 0 0 chrU 5958944 5958968 -4090069 + AT_rich Low_complexity Low_complexity 1 24 0 6 630 2326 133 102 9 chrU 5959732 5960216 -4088821 + ACCORD2_I LTR Gypsy 456 1185 -6027 6 630 518 98 12 0 chrU 5960242 5960324 -4088713 + ACCORD2_I LTR Gypsy 1280 1362 -5850 6 630 239 125 0 0 chrU 5960435 5960475 -4088562 - BARI1 DNA Tc1 -1708 42 3 6 630 3717 59 48 2 chrU 5960443 5960969 -4088068 + IDEFIX_LTR LTR Gypsy 1 550 -44 6 630 47 19 0 0 chrU 5960969 5961023 -4088014 + AT_rich Low_complexity Low_complexity 1 54 0 6 630 24 53 0 0 chrU 5961248 5961286 -4087751 + AT_rich Low_complexity Low_complexity 1 38 0 6 630 4493 50 0 2 chrU 5961554 5962161 -4086876 + IDEFIX_I LTR Gypsy 1 606 -5022 6 630 394 50 0 0 chrU 5962167 5962227 -4086810 + IDEFIX_I LTR Gypsy 719 778 -4850 6 630 2075 48 0 4 chrU 5962220 5962493 -4086544 - DM412 LTR Gypsy -708 6189 5918 6 630 4156 37 40 3 chrU 5962593 5963248 -4085789 + DOC3_DM LINE Jockey 3963 4740 0 6 630 226 292 0 0 chrU 5963300 5963372 -4085665 - DIVER2_I LTR Pao -2951 1196 1125 6 630 1108 316 9 0 chrU 5963569 5964002 -4085035 - DIVER2_I LTR Pao -3264 883 447 6 630 630 158 184 65 chrU 5964541 5964758 -4084279 - DNAREP1_DM LINE Penelope -70 524 282 6 630 267 304 26 0 chrU 5965622 5965737 -4083300 - FW3_DM LINE Jockey -421 2711 2594 6 630 365 248 21 14 chrU 5967459 5967602 -4081435 + XDMR Unknown Unknown 204 347 -14 6 630 4050 196 19 30 chrU 5967474 5971407 -4077630 - SAR_DM Satellite Satellite -261 3890 1 6 630 2095 198 14 8 chrU 5971423 5972161 -4076876 - SAR_DM Satellite Satellite -396 742 1 6 630 2458 104 11 38 chrU 5972263 5976932 -4072105 + DMSAT6 Satellite Satellite 1 4544 -28 6 630 2360 3 7 3 chrU 5977064 5977356 -4071681 - DM412 LTR Gypsy -5785 1112 820 6 630 1517 16 5 5 chrU 5977357 5977551 -4071486 - DM412B_LTR LTR Gypsy -6017 880 687 6 630 4163 3 2 2 chrU 5977541 5978155 -4070882 - DM412B_LTR LTR Gypsy -89 482 1 6 630 2948 42 59 0 chrU 5978215 5978622 -4070415 - DOC3_DM LINE Jockey -2950 1790 1360 6 630 1286 264 18 21 chrU 5978618 5979055 -4069982 - BS2 LINE Jockey -1937 2784 2349 6 630 5040 27 55 1 chrU 5979055 5979725 -4069312 - DOC3_DM LINE Jockey -1030 3710 3005 6 630 2588 36 9 3 chrU 5979724 5980055 -4068982 - DOC3_DM LINE Jockey -1886 2854 2522 6 630 4224 37 13 2 chrU 5980043 5980588 -4068449 - DOC3_DM LINE Jockey -2439 2301 1751 6 630 4191 40 4 9 chrU 5980568 5981117 -4067920 - DMRT1B LINE R1 0 5183 4638 6 630 2638 39 67 0 chrU 5981109 5981469 -4067568 - DOC3_DM LINE Jockey -2997 1743 1360 6 630 711 256 23 19 chrU 5981465 5981728 -4067309 - BS2 LINE Jockey -1937 2784 2521 6 630 14571 45 49 28 chrU 5981828 5983882 -4065155 - ROOA_I LTR Pao -4751 2098 1 6 630 877 52 0 0 chrU 5983882 5983998 -4065039 - ROOA_LTR LTR Pao 0 386 271 6 630 17042 52 17 3 chrU 5986582 5988890 -4060147 + IDEFIX_I LTR Gypsy 1411 3750 -1878 6 630 1360 71 0 0 chrU 5988888 5989084 -4059953 + IDEFIX_I LTR Gypsy 3951 4146 -1482 6 630 340 245 0 0 chrU 5989074 5989176 -4059861 + ROO_I LTR Pao 7797 7898 -358 6 630 941 317 24 18 chrU 5990718 5991229 -4057808 - GTWIN_I LTR Gypsy -1534 4887 4374 6 630 34 72 0 0 chrU 5992045 5992114 -4056923 + AT_rich Low_complexity Low_complexity 1 69 0 6 630 1011 96 79 0 chrU 5993130 5993308 -4055729 - DIVER2_I LTR Pao -3955 192 1 6 630 3299 16 0 0 chrU 5993308 5993693 -4055344 - DIVER2_LTR LTR Pao 0 385 1 6 630 23 33 0 0 chrU 5993693 5993723 -4055314 + AT_rich Low_complexity Low_complexity 1 30 0 6 630 542 175 97 86 chrU 5994068 5994243 -4054794 - ACCORD2_LTR LTR Gypsy 0 215 39 6 630 524 268 6 22 chrU 5994332 5994515 -4054522 - ROVER-I_DM LTR Gypsy -3541 3043 2864 6 630 204 65 83 42 chrU 5995268 5995316 -4053721 + (TTTAA)n Simple_repeat Simple_repeat 3 52 0 6 630 4807 13 23 0 chrU 5996042 5996651 -4052386 + Invader3_I LTR Gypsy 4266 4888 0 6 630 1688 84 3 111 chrU 5996651 5996985 -4052052 + Invader3_LTR LTR Gypsy 1 298 0 6 630 580 335 26 13 chrU 5997124 5997511 -4051526 + QUASIMODO_I LTR Gypsy 437 828 -5232 6 630 597 241 35 5 chrU 5997660 5997860 -4051177 + IDEFIX_I LTR Gypsy 1512 1717 -3911 6 630 1756 252 65 19 chrU 5997859 5998703 -4050334 + TV1I LTR Gypsy 2087 2469 -3494 6 630 860 251 28 36 chrU 5998701 5999060 -4049977 + QUASIMODO_I LTR Gypsy 3201 3556 -2504 6 630 1981 48 175 3 chrU 5999059 5999373 -4049664 + G3_DM LINE Jockey 4088 4455 -150 6 630 1896 36 0 31 chrU 5999405 5999663 -4049374 - G5A_DM LINE Jockey 0 2841 2592 6 630 2431 66 39 6 chrU 5999664 6000000 -4049037 - G5A_DM LINE Jockey -1691 1150 804 6 630 4125 94 91 14 chrU 6000000 6000625 -4048412 - G5A_DM LINE Jockey -2038 803 131 6 630 5811 19 4 27 chrU 6000725 6001420 -4047617 + Gypsy12_LTR LTR Gypsy 1658 2336 0 6 630 6800 50 72 0 chrU 6001420 6002602 -4046435 - DOC3_DM LINE Jockey -2698 2042 776 6 630 1112 47 0 20 chrU 6002597 6002749 -4046288 - DOC3_DM LINE Jockey -4591 149 1 6 630 327 182 0 15 chrU 6002799 6002866 -4046171 + Gypsy8_LTR LTR Gypsy 79 144 -160 6 630 2464 46 30 0 chrU 6002866 6003171 -4045866 - PROTOP_B DNA P 0 1153 840 6 630 10710 38 91 3 chrU 6003173 6004597 -4044440 + DOC5_DM LINE Jockey 1 1549 -3133 6 630 4418 17 148 2 chrU 6004592 6005167 -4043870 + DOC5_DM LINE Jockey 1745 2403 -2279 6 630 1081 55 0 7 chrU 6005160 6005306 -4043731 + DOC5_DM LINE Jockey 2521 2665 -2017 6 630 3511 42 0 0 chrU 6005406 6005816 -4043221 + MAX_I LTR Pao 2616 3025 -4889 6 630 2132 47 66 0 chrU 6005815 6006089 -4042948 + MAX_I LTR Pao 7622 7913 -1 6 630 1922 101 76 10 chrU 6006092 6006393 -4042644 + MAX_LTR LTR Pao 1 321 0 6 630 5264 133 9 1 chrU 6006753 6007518 -4041519 + Gypsy12_I LTR Gypsy 3492 4262 -1284 6 630 6675 112 22 55 chrU 6007520 6008592 -4040445 + Gypsy12_I LTR Gypsy 4507 5543 -3 6 630 1631 246 97 85 chrU 6008602 6009406 -4039631 + Gypsy12A_LTR LTR Gypsy 3 816 -1464 6 630 4592 28 82 0 chrU 6009406 6009979 -4039058 - PROTOP DNA P 0 4480 3861 6 630 4988 86 121 3 chrU 6010087 6010985 -4038052 + G2_DM LINE Jockey 6 699 -2403 6 630 3309 27 0 3 chrU 6010981 6011357 -4037680 + G2_DM LINE Jockey 1083 1457 -1645 6 630 2533 96 42 0 chrU 6011355 6011689 -4037348 - G2_DM LINE Jockey -75 3027 2680 6 630 7822 168 50 40 chrU 6011908 6014117 -4034920 + G2_DM LINE Jockey 318 2550 -1796 6 630 546 0 136 0 chrU 6014139 6014293 -4034744 + (TA)n Simple_repeat Simple_repeat 1 175 0 6 630 3059 0 3 0 chrU 6014298 6014632 -4034405 + NOMAD_LTR LTR Gypsy 1 335 -183 6 630 2258 132 55 36 chrU 6017587 6018002 -4031035 + Invader1_LTR LTR Gypsy 1 423 0 6 630 10472 20 2 0 chrU 6019351 6020522 -4028515 + R1_DM LINE R1 4184 5356 0 6 630 20111 40 11 16 chrU 6020555 6022991 -4026046 + R1_DM LINE R1 1 2425 -2931 6 630 1467 12 0 23 chrU 6022991 6023162 -4025875 + ACCORD2_LTR LTR Gypsy 1 167 -48 6 630 955 9 0 0 chrU 6023158 6023263 -4025774 - MICROPIA_LTR LTR Gypsy -371 105 1 6 630 5037 7 0 31 chrU 6023263 6023866 -4025171 - MICROPIA_I LTR Gypsy 0 4476 3893 6 630 6278 95 1 5 chrU 6023966 6024804 -4024233 - Gypsy12_I LTR Gypsy -3454 2092 1258 6 630 6208 97 61 31 chrU 6024824 6025842 -4023195 - Gypsy12_I LTR Gypsy -4498 1048 1 6 630 351 118 0 0 chrU 6025842 6025893 -4023144 - Gypsy12_LTR LTR Gypsy 0 2336 2286 6 630 3980 209 132 84 chrU 6025921 6027596 -4021441 - Gypsy12_LTR LTR Gypsy -575 1761 5 6 630 1926 95 0 0 chrU 6027582 6027835 -4021202 - Gypsy12_I LTR Gypsy -1773 3773 3521 6 630 4355 102 2 3 chrU 6027844 6028436 -4020601 - Gypsy12_I LTR Gypsy -2565 2981 2391 6 630 3392 46 2 17 chrU 6028554 6028995 -4020042 - STALKER4_LTR LTR Gypsy -3 399 1 6 78 2766 104 16 35 chrU 6028999 6030215 -4018822 + DMSAT6 Satellite Satellite 1 1192 -3 6 631 2654 112 11 26 chrU 6030247 6030971 -4018066 + DMSAT6 Satellite Satellite 1 713 0 6 631 1877 108 16 60 chrU 6031023 6031339 -4017698 - Gypsy6A_LTR LTR Gypsy -118 302 1 6 631 5267 284 18 25 chrU 6031342 6032960 -4016077 - Gypsy6_I LTR Gypsy -1 7011 5406 6 631 9168 18 19 4 chrU 6033102 6034160 -4014877 + FW_DM LINE Jockey 1731 2804 -1888 6 631 27047 22 19 4 chrU 6034180 6037332 -4011705 + FW_DM LINE Jockey 1490 4688 -4 6 631 1272 161 21 13 chrU 6037314 6037553 -4011484 + ROVER-I_DM LTR Gypsy 3754 3994 -2590 6 631 2631 16 0 3 chrU 6037654 6037967 -4011070 + IDEFIX_I LTR Gypsy 5317 5628 0 6 631 4710 39 3 7 chrU 6037967 6038563 -4010474 + IDEFIX_LTR LTR Gypsy 1 594 0 6 631 2393 31 34 81 chrU 6038563 6038943 -4010094 + ROO_I LTR Pao 784 1145 -7111 6 631 6729 29 21 11 chrU 6038947 6040141 -4008896 + ROO_I LTR Pao 1375 2627 -5629 6 631 1414 58 18 76 chrU 6040148 6040371 -4008666 - ROO_I LTR Pao -8046 210 1 6 631 3345 37 49 0 chrU 6040371 6040779 -4008258 - ROO_LTR LTR Pao 0 428 1 6 631 1018 247 4 4 chrU 6040779 6041027 -4008010 - ROVER-I_DM LTR Gypsy -4253 2331 2084 6 631 22 0 0 0 chrU 6041516 6041538 -4007499 + AT_rich Low_complexity Low_complexity 1 22 0 6 631 873 230 5 32 chrU 6041876 6042096 -4006941 - ROVER-I_DM LTR Gypsy -4548 2036 1823 6 631 4992 14 0 0 chrU 6042199 6042770 -4006267 - ROO_I LTR Pao -1058 7198 6628 6 631 8255 11 30 0 chrU 6042770 6044419 -4004618 - ROO_I LTR Pao -2148 6108 4410 6 631 37 52 0 0 chrU 6044457 6044515 -4004522 + AT_rich Low_complexity Low_complexity 1 58 0 6 631 307 224 0 56 chrU 6046541 6046631 -4002406 + DMCR1A LINE CR1 2126 2210 -2260 6 631 2583 110 9 39 chrU 6046735 6051134 -3997903 - DMSAT6 Satellite Satellite -4 4267 1 6 631 237 109 52 52 chrU 6051237 6051295 -3997742 + Gypsy3_I LTR Gypsy 38 95 -6082 6 631 223 161 33 74 chrU 6051369 6051490 -3997547 + (TTATA)n Simple_repeat Simple_repeat 2 117 0 6 631 683 211 33 147 chrU 6051490 6051796 -3997241 + Gypsy3_I LTR Gypsy 173 443 -5734 6 631 5046 162 64 34 chrU 6051824 6052720 -3996317 + Gypsy3_I LTR Gypsy 645 1567 -4610 6 631 3125 257 92 0 chrU 6052734 6053508 -3995529 + Gypsy6_I LTR Gypsy 2278 3122 -3890 6 631 544 0 0 0 chrU 6053506 6053565 -3995472 - PROTOP_B DNA P -1094 59 1 6 631 3133 27 75 0 chrU 6053607 6054021 -3995016 + PROTOP_A DNA P 198 642 -463 6 631 1728 31 0 0 chrU 6054022 6054218 -3994819 + PROTOP_A DNA P 910 1105 0 6 631 1463 288 86 48 chrU 6054221 6055623 -3993414 - QUASIMODO_I LTR Gypsy -3895 2165 711 6 631 23125 36 40 3 chrU 6055732 6058674 -3990363 - R1_DM LINE R1 -2303 3053 1 6 631 11885 26 1 1 chrU 6058707 6060127 -3988910 - R1_DM LINE R1 0 5356 3936 6 631 4075 187 14 18 chrU 6060867 6061743 -3987294 + Gypsy5_I LTR Gypsy 85 956 -5553 6 631 16922 156 5 0 chrU 6061738 6064620 -3984417 + Gypsy5_I LTR Gypsy 1817 4713 -1796 6 631 2501 94 10 38 chrU 6064723 6069102 -3979935 + DMSAT6 Satellite Satellite 1 4254 -29 6 631 2556 124 17 22 chrU 6069202 6071378 -3977659 - DMSAT6 Satellite Satellite -152 2164 1 6 631 2559 122 19 15 chrU 6071392 6073580 -3975457 - DMSAT6 Satellite Satellite 0 2198 1 6 631 5525 16 66 0 chrU 6073680 6074363 -3974674 - ACCORD2_I LTR Gypsy -2167 5045 4318 6 631 37 39 0 0 chrU 6074390 6074441 -3974596 + AT_rich Low_complexity Low_complexity 1 51 0 6 631 3405 117 57 1 chrU 6074855 6075753 -3973284 + DMRT1C LINE R1 3743 4742 -701 6 631 1822 134 35 9 chrU 6075751 6076067 -3972970 + DMRT1C LINE R1 4966 5289 -154 6 631 1071 156 40 0 chrU 6076065 6076264 -3972773 + DM297_I LTR Gypsy 2533 2739 -3428 6 631 633 183 121 21 chrU 6076301 6076491 -3972546 + DM297_I LTR Gypsy 3368 3576 -2591 6 631 601 145 22 12 chrU 6077093 6077260 -3971777 - DNAREP1_DM LINE Penelope -262 332 117 6 631 5440 70 38 0 chrU 6078157 6078912 -3970125 - DMRT1B LINE R1 -2171 3012 2229 6 631 3998 93 39 0 chrU 6078909 6079499 -3969538 - DMRT1B LINE R1 -3103 2080 1468 6 631 1355 58 5 0 chrU 6079524 6079714 -3969323 - DMRT1B LINE R1 -4090 1093 903 6 631 593 74 0 0 chrU 6079893 6079974 -3969063 - DMRT1B LINE R1 -4281 902 822 6 631 3209 64 62 0 chrU 6079979 6080417 -3968620 - Baggins1 LINE LOA -2985 2468 2004 6 631 353 80 0 0 chrU 6080415 6080465 -3968572 - Baggins1 LINE LOA -4520 933 884 6 631 2820 72 39 17 chrU 6080497 6080909 -3968128 - Baggins1 LINE LOA -4925 528 108 6 631 8787 123 4 3 chrU 6081191 6082527 -3966510 - HMSBEAGLE_I LTR Gypsy -679 5850 4514 6 631 3626 2 0 0 chrU 6082627 6083037 -3966000 - DOC LINE Jockey -4312 413 4 6 631 2955 215 38 19 chrU 6083035 6084991 -3964046 - SAR_DM Satellite Satellite -434 1992 1 6 631 710 148 7 0 chrU 6084993 6085135 -3963902 + ARS406_DM Unknown Unknown 31 173 -180 6 631 2581 210 38 7 chrU 6085133 6085867 -3963170 - SAR_DM Satellite Satellite -397 1075 319 6 631 4583 4 0 0 chrU 6085889 6086407 -3962630 - NOMAD_LTR LTR Gypsy 0 518 1 6 631 5203 2 0 0 chrU 6086407 6086991 -3962046 - NOMAD_I LTR Gypsy 0 6572 5989 6 631 7963 29 8 0 chrU 6087094 6088078 -3960959 + NINJA_I LTR Pao 1844 2835 -3176 6 631 4011 31 2 2 chrU 6088320 6088809 -3960228 + NINJA_I LTR Pao 4312 4800 -1211 6 631 6421 22 32 1 chrU 6088803 6089590 -3959447 + NINJA_I LTR Pao 5199 6009 -2 6 631 845 9 0 51 chrU 6089591 6089709 -3959328 + NINJA_LTR LTR Pao 1 112 -205 6 631 420 0 0 19 chrU 6089724 6089777 -3959260 + NINJA_LTR LTR Pao 86 137 -180 6 631 2159 41 0 0 chrU 6091552 6091823 -3957214 + MAX_I LTR Pao 7644 7914 0 6 631 1819 110 70 0 chrU 6091826 6092125 -3956912 + MAX_LTR LTR Pao 1 320 -1 6 631 46 0 0 0 chrU 6092316 6092362 -3956675 + AT_rich Low_complexity Low_complexity 1 46 0 6 631 24 53 0 0 chrU 6093032 6093070 -3955967 + AT_rich Low_complexity Low_complexity 1 38 0 6 631 250 360 0 0 chrU 6093204 6093315 -3955722 - Copia_I LTR Copia -4086 507 397 6 631 315 89 0 0 chrU 6093605 6093650 -3955387 + Mariner2_DM DNA Tc1 47 91 -821 6 631 3901 89 132 30 chrU 6093684 6094759 -3954278 + DMRT1A LINE R1 3984 5169 -14 6 631 267 139 0 0 chrU 6095056 6095099 -3953938 - Gypsy5_I LTR Gypsy 0 6509 6467 6 631 2388 98 10 25 chrU 6096327 6097222 -3951815 - DMSAT6 Satellite Satellite -32 882 1 6 631 2324 109 7 28 chrU 6097615 6098079 -3950958 - DMSAT6 Satellite Satellite 0 470 17 6 631 2442 98 7 65 chrU 6099278 6100308 -3948729 - DMSAT6 Satellite Satellite -88 970 1 6 631 10556 26 8 3 chrU 6100412 6101710 -3947327 + NINJA_I LTR Pao 1918 3221 -2790 6 631 17196 27 20 1 chrU 6101705 6103814 -3945223 + NINJA_I LTR Pao 3439 5588 -423 6 631 1851 14 0 0 chrU 6103820 6104036 -3945001 + NINJA_I LTR Pao 5796 6011 0 6 631 1484 40 170 22 chrU 6104036 6104312 -3944725 + NINJA_LTR LTR Pao 1 317 0 6 631 22 0 0 0 chrU 6104378 6104400 -3944637 + AT_rich Low_complexity Low_complexity 1 22 0 6 631 2876 45 124 0 chrU 6106913 6107317 -3941720 - G5A_DM LINE Jockey 0 2841 2388 6 631 26 0 0 0 chrU 6107726 6107752 -3941285 + AT_rich Low_complexity Low_complexity 1 26 0 6 631 198 0 0 0 chrU 6107866 6107888 -3941149 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 6 631 46 0 0 0 chrU 6108788 6108834 -3940203 + AT_rich Low_complexity Low_complexity 1 46 0 6 631 544 203 98 0 chrU 6109232 6109365 -3939672 + FW_DM LINE Jockey 1540 1685 -3007 6 631 596 53 0 0 chrU 6109380 6109455 -3939582 + FW_DM LINE Jockey 1898 1972 -2720 6 631 1309 140 25 8 chrU 6109453 6109690 -3939347 + FW_DM LINE Jockey 2403 2643 -2049 6 631 921 168 119 5 chrU 6109707 6109917 -3939120 + FW_DM LINE Jockey 2699 2932 -1760 6 631 9234 121 23 6 chrU 6109916 6111443 -3937594 + FW_DM LINE Jockey 3127 4679 -13 6 631 1062 116 241 0 chrU 6111709 6111941 -3937096 + DNAREP1_DM LINE Penelope 307 594 0 6 631 880 119 0 54 chrU 6112650 6112818 -3936219 - Gypsy8_I LTR Gypsy -4117 230 72 6 631 277 224 111 7 chrU 6112850 6112994 -3936043 - Gypsy8_I LTR Gypsy -4188 159 1 6 631 1545 138 4 93 chrU 6112968 6113329 -3935708 - Gypsy8_LTR LTR Gypsy 0 304 1 6 631 289 171 289 0 chrU 6113428 6113504 -3935533 - DM176_I LTR Gypsy -1796 4624 4527 6 631 264 86 0 0 chrU 6113502 6113537 -3935500 - DNAREP1_DM LINE Penelope -217 377 343 6 631 3966 24 40 4 chrU 6113637 6114142 -3934895 + IDEFIX_LTR LTR Gypsy 71 593 -1 6 631 340 68 68 0 chrU 6114142 6114215 -3934822 + (TA)n Simple_repeat Simple_repeat 1 78 0 6 631 244 263 8 48 chrU 6114217 6114341 -3934696 + QUASIMODO_I LTR Gypsy 1611 1729 -4331 6 631 634 264 37 108 chrU 6114559 6114882 -3934155 + IDEFIX_I LTR Gypsy 1457 1756 -3872 6 631 2753 96 60 0 chrU 6114888 6115306 -3933731 + DM297_I LTR Gypsy 737 1179 -4988 6 631 2733 246 95 71 chrU 6115276 6116499 -3932538 + DM297_I LTR Gypsy 2206 3458 -2709 6 631 4278 220 81 63 chrU 6116499 6117917 -3931120 + Gypsy12_LTR LTR Gypsy 1 1444 -892 6 631 12643 5 20 3 chrU 6118032 6119458 -3929579 - Invader4_I LTR Gypsy -963 1450 1 6 631 3034 3 0 34 chrU 6119458 6119813 -3929224 - Invader4_LTR LTR Gypsy 0 346 4 6 631 504 0 0 0 chrU 6119813 6119864 -3929173 + Copia2_LTR_DM LTR Copia 148 198 0 6 631 1852 0 0 5 chrU 6119868 6120087 -3928950 - POGO DNA Pogo 0 2121 1904 6 631 6640 1 1 1 chrU 6120085 6120821 -3928216 - POGO DNA Pogo -1385 736 1 6 631 339 25 0 0 chrU 6120821 6120861 -3928176 + (TTA)n Simple_repeat Simple_repeat 2 41 0 6 631 227 330 35 9 chrU 6121180 6121293 -3927744 + Copia2_I LTR Copia 116 231 -3931 6 631 356 293 39 15 chrU 6121566 6121712 -3927325 + Copia2_I LTR Copia 513 698 -3464 6 631 383 0 0 0 chrU 6121719 6121764 -3927273 + Copia2_LTR_DM LTR Copia 154 198 0 6 631 4931 7 0 2 chrU 6121764 6122321 -3926716 + Copia2_I LTR Copia 1 556 -3606 6 631 2385 110 10 41 chrU 6122421 6123427 -3925610 + DMSAT6 Satellite Satellite 1 974 -368 6 631 2589 114 11 35 chrU 6123716 6126692 -3922345 + DMSAT6 Satellite Satellite 1 2904 -3 6 631 9627 207 15 3 chrU 6126794 6129038 -3919999 - ROVER-I_DM LTR Gypsy -1773 4811 2421 6 631 1054 226 0 0 chrU 6129026 6129260 -3919777 - ROVER-I_DM LTR Gypsy -3816 2768 2535 6 631 2799 257 32 87 chrU 6129257 6130956 -3918081 - ROVER-I_DM LTR Gypsy -4979 1605 1 6 631 286 98 29 34 chrU 6130956 6131025 -3918012 - ROVER-LTR_DM LTR Gypsy -7 403 315 6 631 400 344 77 47 chrU 6131283 6132196 -3916841 + BLASTOPIA_I LTR Gypsy 3541 4480 -1 6 631 393 317 59 65 chrU 6134891 6135421 -3913616 + BLASTOPIA_I LTR Gypsy 2080 2715 -2173 6 631 1586 240 97 11 chrU 6135523 6135978 -3913059 + Gypsy2_I LTR Gypsy 3094 3587 -2548 6 631 1066 214 32 0 chrU 6135979 6136199 -3912838 + Gypsy6_I LTR Gypsy 4452 4678 -2334 6 631 7026 26 27 2 chrU 6136209 6137055 -3911982 - DMCR1A LINE CR1 0 4470 3604 6 631 9086 28 12 0 chrU 6137055 6138147 -3910890 + PROTOP_A DNA P 1 1105 0 6 631 5712 36 7 4 chrU 6138147 6138839 -3910198 - DMCR1A LINE CR1 -860 3610 2917 6 631 2928 38 181 0 chrU 6138820 6139324 -3909713 - DMCR1A LINE CR1 -1884 2586 1992 6 631 3303 37 39 0 chrU 6139359 6139765 -3909272 + DOC3_DM LINE Jockey 2152 2573 -2167 6 631 22 35 0 0 chrU 6139929 6139958 -3909079 + AT_rich Low_complexity Low_complexity 1 29 0 6 631 208 200 31 0 chrU 6140267 6140332 -3908705 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 631 22 35 0 0 chrU 6140526 6140555 -3908482 + AT_rich Low_complexity Low_complexity 1 29 0 6 631 227 129 31 31 chrU 6140864 6140928 -3908109 + (TAA)n Simple_repeat Simple_repeat 2 65 0 6 631 220 141 46 15 chrU 6141474 6141539 -3907498 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 631 224 185 31 0 chrU 6142048 6142113 -3906924 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 631 58 15 0 0 chrU 6142560 6142625 -3906412 + AT_rich Low_complexity Low_complexity 1 65 0 6 631 22 35 0 0 chrU 6142800 6142829 -3906208 + AT_rich Low_complexity Low_complexity 1 29 0 6 631 220 141 46 15 chrU 6143139 6143204 -3905833 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 631 58 15 0 0 chrU 6143768 6143833 -3905204 + AT_rich Low_complexity Low_complexity 1 65 0 6 631 25 0 0 0 chrU 6144717 6144742 -3904295 + AT_rich Low_complexity Low_complexity 1 25 0 6 631 3276 142 126 27 chrU 6145097 6145880 -3903157 + IDEFIX_I LTR Gypsy 2959 3819 -1809 6 631 3320 178 29 36 chrU 6145872 6146572 -3902465 + IDEFIX_I LTR Gypsy 4028 4722 -906 6 631 830 88 73 0 chrU 6146623 6146759 -3902278 + IDEFIX_LTR LTR Gypsy 1 146 -448 6 631 279 179 37 49 chrU 6146934 6147016 -3902021 - DM412B_LTR LTR Gypsy -262 309 229 6 631 211 154 26 0 chrU 6147188 6147227 -3901810 + T-rich Low_complexity Low_complexity 1 40 0 6 631 45 0 0 0 chrU 6147567 6147612 -3901425 + AT_rich Low_complexity Low_complexity 1 45 0 6 631 27 29 0 0 chrU 6148231 6148265 -3900772 + AT_rich Low_complexity Low_complexity 1 34 0 6 631 10664 92 3 2 chrU 6148521 6150030 -3899007 + S_DM DNA Tc1 226 1736 0 6 631 1269 168 40 120 chrU 6150037 6150436 -3898601 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 631 369 214 87 10 chrU 6150671 6150775 -3898262 - DNAREP1_DM LINE Penelope -416 178 67 6 631 741 189 32 19 chrU 6150909 6151065 -3897972 + HETRP_DM Satellite Satellite 1518 1675 -197 6 631 1465 120 234 45 chrU 6151072 6151511 -3897526 - HOBO DNA hAT 0 3016 2495 6 631 2536 74 8 8 chrU 6151510 6151877 -3897160 - HOBO DNA hAT -1550 1466 1100 6 631 4681 70 0 3 chrU 6151882 6152501 -3896536 - HOBO DNA hAT -2070 946 330 6 631 1820 66 4 23 chrU 6152478 6152743 -3896294 - PROTOP_B DNA P -675 478 219 6 631 5505 2 0 0 chrU 6152843 6153446 -3895591 - DOC LINE Jockey -4116 609 7 6 631 333 295 77 62 chrU 6153516 6153906 -3895131 - HMSBEAGLE_I LTR Gypsy -1578 4951 4556 6 631 2451 306 56 38 chrU 6154443 6156108 -3892929 - HMSBEAGLE_I LTR Gypsy -2535 3994 2301 6 631 763 329 19 10 chrU 6156336 6156646 -3892391 - HMSBEAGLE_I LTR Gypsy -4672 1857 1545 6 631 21 0 0 0 chrU 6156870 6156891 -3892146 + AT_rich Low_complexity Low_complexity 1 21 0 6 631 8991 24 5 6 chrU 6157165 6158267 -3890770 + PROTOP_A DNA P 6 1105 0 6 631 700 214 6 54 chrU 6158275 6158443 -3890594 - HETA LINE telomeric -1770 4311 4152 6 631 373 179 93 9 chrU 6158447 6158554 -3890483 - TAHRE LINE telomeric -3039 7424 7309 6 631 4715 22 0 0 chrU 6158847 6159397 -3889640 - PROTOP_A DNA P -555 550 1 6 631 29 0 0 0 chrU 6159689 6159718 -3889319 + AT_rich Low_complexity Low_complexity 1 29 0 6 631 21 0 0 0 chrU 6159739 6159760 -3889277 + AT_rich Low_complexity Low_complexity 1 21 0 6 631 37 23 0 0 chrU 6159851 6159895 -3889142 + AT_rich Low_complexity Low_complexity 1 44 0 6 631 21 0 0 0 chrU 6159916 6159937 -3889100 + AT_rich Low_complexity Low_complexity 1 21 0 6 631 553 152 19 19 chrU 6160244 6160351 -3888686 - HETA LINE telomeric -1459 4622 4516 6 78 373 179 93 9 chrU 6160355 6160462 -3888575 - TAHRE LINE telomeric -3039 7424 7309 6 632 3432 38 142 0 chrU 6160860 6161367 -3887670 + PROTOP DNA P 489 1067 -3413 6 632 33 0 0 0 chrU 6161599 6161632 -3887405 + AT_rich Low_complexity Low_complexity 1 33 0 6 632 23 78 0 0 chrU 6161678 6161729 -3887308 + AT_rich Low_complexity Low_complexity 1 51 0 6 632 21 89 0 0 chrU 6161767 6161823 -3887214 + AT_rich Low_complexity Low_complexity 1 56 0 6 632 3621 63 42 14 chrU 6162911 6163514 -3885523 + PROTOP_A DNA P 571 1105 0 6 632 26 30 0 0 chrU 6163891 6163924 -3885113 + AT_rich Low_complexity Low_complexity 1 33 0 6 632 21 57 0 0 chrU 6163963 6163998 -3885039 + AT_rich Low_complexity Low_complexity 1 35 0 6 632 3184 63 65 2 chrU 6164813 6165305 -3883732 + PROTOP DNA P 203 725 -3755 6 632 1719 35 0 0 chrU 6165303 6165504 -3883533 + PROTOP DNA P 4280 4480 0 6 632 2559 0 0 0 chrU 6165764 6166065 -3882972 + Invader2_I LTR Gypsy 4292 4592 0 6 632 2421 4 0 0 chrU 6166065 6166331 -3882706 + Invader2_LTR LTR Gypsy 1 266 0 6 632 240 318 40 40 chrU 6166394 6166571 -3882466 - Gypsy6_I LTR Gypsy -2298 4714 4538 6 632 775 329 79 40 chrU 6167082 6167625 -3881412 - Gypsy4_I LTR Gypsy -2491 4081 2954 6 632 1571 23 19 0 chrU 6167625 6167839 -3881198 - TLD2 Unknown Unknown 0 218 1 6 632 775 329 79 40 chrU 6167839 6168251 -3880786 - Gypsy4_I LTR Gypsy -2491 2953 2093 6 632 346 278 40 40 chrU 6169790 6169940 -3879097 - Gypsy3_I LTR Gypsy -4810 1367 1218 6 632 1208 86 81 0 chrU 6170207 6170393 -3878644 - DMCR1A LINE CR1 -1114 3356 3156 6 632 233 361 6 6 chrU 6170400 6170570 -3878467 - BURDOCK_I LTR Gypsy -4878 982 813 6 632 25 51 0 0 chrU 6170650 6170689 -3878348 + AT_rich Low_complexity Low_complexity 1 39 0 6 632 23 54 0 0 chrU 6170774 6170811 -3878226 + AT_rich Low_complexity Low_complexity 1 37 0 6 632 2925 255 25 4 chrU 6170895 6171726 -3877311 - QUASIMODO_I LTR Gypsy -3397 2663 1815 6 632 681 306 84 43 chrU 6171867 6172332 -3876705 - TV1I LTR Gypsy -4991 972 489 6 632 2221 160 93 29 chrU 6172610 6173137 -3875900 - QUASIMODO_LTR LTR Gypsy -15 643 83 6 632 8857 40 22 10 chrU 6173144 6174235 -3874802 - DMCR1A LINE CR1 0 4470 3367 6 632 1870 107 0 25 chrU 6174337 6174664 -3874373 - DMSAT6 Satellite Satellite -28 442 124 6 632 2703 112 18 31 chrU 6175832 6178513 -3870524 - DMSAT6 Satellite Satellite -52 2646 1 6 632 2657 59 4 5 chrU 6178619 6179002 -3870035 + G6_DM LINE Jockey 1739 2042 0 6 632 13268 3 0 1 chrU 6179001 6180525 -3868512 + STALKER4_I LTR Gypsy 5008 6530 0 6 632 3662 2 0 2 chrU 6180525 6180928 -3868109 + STALKER4_LTR LTR Gypsy 1 402 0 6 632 11492 92 34 9 chrU 6180955 6182711 -3866326 + Gypsy3_I LTR Gypsy 4501 7012 0 6 632 325 120 70 0 chrU 6182713 6182780 -3866257 + Gypsy3_LTR LTR Gypsy 1 79 -328 6 632 398 219 130 11 chrU 6182883 6183069 -3865968 - Gypsy8_I LTR Gypsy -4633 2020 1857 6 632 1536 88 15 0 chrU 6183058 6183262 -3865775 - Gypsy8_I LTR Gypsy -3867 480 274 6 632 2476 78 2 51 chrU 6183260 6184195 -3864842 + DMSAT6 Satellite Satellite 1 888 -37 6 632 2054 137 0 6 chrU 6184243 6184559 -3864478 - FW_DM LINE Jockey -1567 3125 2812 6 632 2521 82 13 48 chrU 6184560 6185694 -3863343 + DMSAT6 Satellite Satellite 1 1093 -159 6 632 2982 145 2 14 chrU 6185720 6186211 -3862826 - FW_DM LINE Jockey -1567 3125 2641 6 632 658 115 0 0 chrU 6186213 6186309 -3862728 - FW_DM LINE Jockey -2498 2194 2099 6 632 2604 79 16 51 chrU 6186317 6186746 -3862291 - DM297_LTR LTR Gypsy 0 414 1 6 632 2134 50 3 3 chrU 6186746 6187029 -3862008 - DM297_I LTR Gypsy 0 6167 5885 6 632 666 208 20 100 chrU 6187214 6187465 -3861572 - BS2 LINE Jockey -4458 263 33 6 632 715 202 286 11 chrU 6187467 6187850 -3861187 - QUASIMODO_I LTR Gypsy -300 5760 5200 6 632 386 238 2 0 chrU 6187873 6187984 -3861053 - QUASIMODO_I LTR Gypsy -1024 5036 4843 6 632 2256 254 26 24 chrU 6188018 6189086 -3859951 - QUASIMODO_I LTR Gypsy -1210 4850 3677 6 632 3486 55 0 19 chrU 6189074 6189704 -3859333 - DMCR1A LINE CR1 -3778 692 1 6 632 4689 246 49 19 chrU 6189710 6191265 -3857772 - QUASIMODO_I LTR Gypsy -2471 3589 1989 6 632 1755 151 20 20 chrU 6191373 6191670 -3857367 - Gypsy12_LTR LTR Gypsy -2039 297 1 6 632 1749 35 128 0 chrU 6191670 6191897 -3857140 + Baggins1 LINE LOA 701 956 -4497 6 632 4935 58 35 63 chrU 6191896 6192610 -3856427 + DOC3_DM LINE Jockey 1944 2637 -2103 6 632 9373 21 4 4 chrU 6192610 6193715 -3855322 + PROTOP_A DNA P 1 1105 0 6 632 967 92 0 23 chrU 6193715 6193848 -3855189 + DOC3_DM LINE Jockey 2631 2760 -1980 6 632 8382 29 32 5 chrU 6193886 6194895 -3854142 + DMCR1A LINE CR1 1 1036 -3434 6 632 4891 40 26 0 chrU 6194897 6195476 -3853561 + DMCR1A LINE CR1 881 1474 -2996 6 632 13253 1 1 0 chrU 6195576 6197014 -3852023 - FW_DM LINE Jockey -2250 2442 1004 6 632 1249 21 0 0 chrU 6197015 6197156 -3851881 - DOC3_DM LINE Jockey -252 4488 4348 6 632 1905 67 17 0 chrU 6197154 6197393 -3851644 - DOC3_DM LINE Jockey -243 4497 4255 6 632 10461 33 86 18 chrU 6197380 6198724 -3850313 - DOC3_DM LINE Jockey -1157 3583 2148 6 632 7673 40 36 9 chrU 6198717 6199679 -3849358 - DOC3_DM LINE Jockey -3748 992 5 6 632 27 29 0 0 chrU 6199806 6199840 -3849197 + AT_rich Low_complexity Low_complexity 1 34 0 6 632 261 91 0 0 chrU 6200079 6200112 -3848925 + Baggins1 LINE LOA 4727 4759 -694 6 632 747 103 241 0 chrU 6200117 6200262 -3848775 + FB4_DM DNA Tc1 3908 4087 -2 6 632 3034 70 7 17 chrU 6201002 6201407 -3847630 - Baggins1 LINE LOA -262 5191 4791 6 632 5877 82 99 7 chrU 6201563 6202781 -3846256 - R1_DM LINE R1 -3113 2243 898 6 632 243 88 0 0 chrU 6202781 6202815 -3846222 + (CGG)n Simple_repeat Simple_repeat 1 34 0 6 632 5877 109 47 3 chrU 6202815 6203140 -3845897 - R1_DM LINE R1 -4459 897 575 6 632 1054 102 29 29 chrU 6203141 6203313 -3845724 - R1_DM LINE R1 -5184 172 1 6 632 2087 68 3 35 chrU 6203331 6203620 -3845417 + Gypsy6A_LTR LTR Gypsy 71 350 -70 6 632 1533 100 29 0 chrU 6203619 6203860 -3845177 - STALKER4_I LTR Gypsy -3666 2864 2617 6 632 5150 28 21 2 chrU 6203971 6204589 -3844448 + FW_DM LINE Jockey 4060 4689 -3 6 632 6985 60 37 4 chrU 6204590 6205891 -3843146 - R1_DM LINE R1 -3966 1390 1 6 632 18533 21 20 4 chrU 6205924 6208056 -3840981 - R1_DM LINE R1 0 5356 3191 6 632 2560 110 14 47 chrU 6208186 6210456 -3838581 + DMSAT6 Satellite Satellite 1 2194 -3 6 632 2491 117 1 67 chrU 6211142 6212234 -3836803 + DMSAT6 Satellite Satellite 1 1019 -256 6 632 5127 12 22 0 chrU 6212337 6212915 -3836122 - IVK_DM LINE I -4810 592 2 6 632 21 0 0 0 chrU 6212924 6212945 -3836092 + AT_rich Low_complexity Low_complexity 1 21 0 6 632 49 43 0 0 chrU 6213119 6213189 -3835848 + AT_rich Low_complexity Low_complexity 1 70 0 6 632 358 159 203 79 chrU 6213307 6213484 -3835553 + DNAREP1_DM LINE Penelope 16 214 -380 6 632 889 167 51 19 chrU 6213468 6213682 -3835355 - DNAREP1_DM LINE Penelope -262 332 117 6 632 1054 115 19 0 chrU 6213738 6213895 -3835142 - DNAREP1_DM LINE Penelope -429 165 6 6 632 230 163 0 0 chrU 6213902 6213945 -3835092 - DM176_I LTR Gypsy -1654 4766 4724 6 632 227 103 205 0 chrU 6213973 6214012 -3835025 + PROTOP_B DNA P 1 47 -1106 6 632 51 70 0 0 chrU 6214483 6214583 -3834454 + AT_rich Low_complexity Low_complexity 1 100 0 6 632 3865 73 16 4 chrU 6214969 6215676 -3833361 + G5_DM LINE Jockey 3972 4856 0 6 632 1559 98 43 4 chrU 6215675 6215910 -3833127 - BS2 LINE Jockey -4464 257 14 6 632 31 58 0 0 chrU 6216115 6216167 -3832870 + AT_rich Low_complexity Low_complexity 1 52 0 6 632 192 40 0 0 chrU 6216284 6216309 -3832728 + (TAA)n Simple_repeat Simple_repeat 1 25 0 6 632 17040 18 0 0 chrU 6216515 6218404 -3830633 - DM1731_I LTR Copia -1068 2908 1020 6 632 238 35 0 0 chrU 6218408 6218437 -3830600 + LSU-rRNA_Dme rRNA rRNA 2604 2632 -1268 6 632 17426 41 7 26 chrU 6218437 6220587 -3828450 + R1_DM LINE R1 1 2109 -3247 6 632 5798 18 7 1 chrU 6221269 6222004 -3827033 + STALKER4_I LTR Gypsy 5792 6530 0 6 632 1676 46 108 0 chrU 6222004 6222346 -3826691 + STALKER4_LTR LTR Gypsy 1 379 -23 6 632 11525 127 130 55 chrU 6222415 6224746 -3824291 - TART LINE telomeric -7194 7283 4778 6 632 305 68 23 0 chrU 6224846 6224890 -3824147 + Gypsy6_I LTR Gypsy 131 175 -6837 6 632 35195 19 26 2 chrU 6224901 6228880 -3820157 + Gypsy6_I LTR Gypsy 767 4840 -2172 6 632 4431 38 45 0 chrU 6228981 6229541 -3819496 - PROTOP DNA P -3895 585 1 6 632 2015 62 4 0 chrU 6229541 6229785 -3819252 - DMTOM1_LTR LTR Gypsy -162 248 4 6 632 1432 115 132 11 chrU 6229791 6230072 -3818965 - ZAM_I LTR Gypsy -6534 956 642 6 632 7569 132 27 43 chrU 6230066 6231433 -3817604 - S_DM DNA Tc1 -197 1539 195 6 632 1365 169 4 0 chrU 6231438 6231686 -3817351 + IDEFIX_I LTR Gypsy 206 454 -5174 6 632 2695 213 149 86 chrU 6231689 6233010 -3816027 + IDEFIX_I LTR Gypsy 1348 2752 -2876 6 632 1762 39 0 0 chrU 6233110 6233316 -3815721 - R1_DM LINE R1 -592 4764 4559 6 632 30402 34 48 25 chrU 6233314 6237121 -3811916 - R1_DM LINE R1 -1270 4086 193 6 632 21177 24 1 2 chrU 6237223 6239633 -3809404 - R1_DM LINE R1 -65 5291 2885 6 632 7799 24 14 0 chrU 6239632 6240517 -3808520 - R1_DM LINE R1 -2587 2769 1873 6 632 5864 42 12 12 chrU 6240512 6241235 -3807802 - R1_DM LINE R1 -4291 1065 343 6 632 5878 61 55 36 chrU 6241335 6242147 -3806890 + CIRCE LINE Composite 143 970 -5386 6 632 6279 50 37 113 chrU 6242274 6243262 -3805775 + CIRCE LINE Composite 973 1885 -4471 6 632 276 279 43 43 chrU 6243268 6243329 -3805708 + Gypsy12_I LTR Gypsy 3835 3933 -1613 6 632 322 68 0 43 chrU 6243329 6243375 -3805662 + CIRCE LINE Composite 1884 1927 -4429 6 632 3331 21 0 0 chrU 6243389 6243761 -3805276 - DIVER2_LTR LTR Pao -13 372 1 6 632 10563 28 12 11 chrU 6243763 6245007 -3804030 - DIVER2_I LTR Pao -736 3411 2167 6 632 1241 28 7 0 chrU 6245007 6245152 -3803885 - DIVER2_I LTR Pao -2097 2050 1905 6 632 1600 41 10 0 chrU 6245152 6245346 -3803691 - DIVER2_I LTR Pao -2404 1743 1548 6 632 13116 5 8 0 chrU 6245446 6246968 -3802069 + DM176_I LTR Gypsy 4887 6420 0 6 632 2335 11 0 78 chrU 6246968 6247275 -3801762 + DM176_LTR LTR Gypsy 1 283 -224 6 632 2139 20 16 0 chrU 6247276 6247529 -3801508 + DM176_LTR LTR Gypsy 251 507 0 6 632 2177 36 0 0 chrU 6247532 6247785 -3801252 + DM1731_LTR LTR Copia 84 336 0 6 632 7290 23 67 0 chrU 6247785 6248754 -3800283 + DM1731_I LTR Copia 1 1034 -2942 6 632 6234 23 1 0 chrU 6248751 6249452 -3799585 - R1_DM LINE R1 0 5356 4655 6 632 1768 30 5 0 chrU 6249552 6249753 -3799284 + G_DM LINE Jockey 917 1118 -3228 6 632 18420 197 17 21 chrU 6249765 6253543 -3795494 + ROVER-I_DM LTR Gypsy 1951 5710 -874 6 632 3485 7 59 0 chrU 6253643 6254233 -3794804 + MICROPIA_I LTR Gypsy 680 1304 -3172 6 632 8651 35 7 2 chrU 6254231 6255388 -3793649 - R1_DM LINE R1 -3100 2256 999 6 632 6947 52 2 2 chrU 6255362 6256204 -3792833 - R1_DM LINE R1 -4514 842 1 6 632 7870 30 85 1 chrU 6256237 6257192 -3791845 - R1_DM LINE R1 0 5356 4322 6 632 1474 6 0 0 chrU 6257191 6257353 -3791684 - R1_DM LINE R1 -1169 4187 4026 6 632 2370 26 11 0 chrU 6257355 6257627 -3791410 - R1_DM LINE R1 -1679 3677 3403 6 632 4664 4 0 0 chrU 6257727 6258229 -3790808 + DMRT1B LINE R1 4682 5183 0 6 632 717 272 8 8 chrU 6258364 6258612 -3790425 - Invader1_I LTR Gypsy -617 2569 2322 6 632 4121 314 24 22 chrU 6258611 6260458 -3788579 - MICROPIA_I LTR Gypsy -3795 3695 1774 6 632 1672 316 40 40 chrU 6260461 6261683 -3787354 - Invader6_I LTR Gypsy -2189 1910 691 6 632 249 276 41 57 chrU 6263226 6263349 -3785688 - Gypsy12_I LTR Gypsy -3409 2137 2017 6 632 292 352 14 43 chrU 6263739 6263947 -3785090 - Gypsy12_I LTR Gypsy -4004 1542 1341 6 632 6491 99 169 4 chrU 6265861 6266900 -3782137 + TAHRE LINE telomeric 1054 2264 -8199 6 632 1244 67 29 151 chrU 6266905 6267150 -3781887 + ACCORD2_LTR LTR Gypsy 1 215 0 6 632 3093 188 53 73 chrU 6267170 6268024 -3781013 + HETA LINE telomeric 3184 4020 -2061 6 632 4832 191 94 21 chrU 6268023 6269217 -3779820 + HETA LINE telomeric 4801 6081 0 6 632 729 195 104 9 chrU 6269206 6269552 -3779485 + TAHRE LINE telomeric 6552 7012 -3451 6 632 2153 50 0 0 chrU 6269563 6269821 -3779216 + FW_DM LINE Jockey 1 258 -4434 6 632 1052 161 8 44 chrU 6269921 6270245 -3778792 - TART LINE telomeric -10448 4029 3886 6 632 1509 106 37 0 chrU 6270424 6270641 -3778396 - TART LINE telomeric -10585 3892 3668 6 632 1293 69 11 6 chrU 6270653 6270827 -3778210 - TART LINE telomeric -6479 7998 7824 6 632 4589 41 39 0 chrU 6270827 6271364 -3777673 + ACCORD_LTR LTR Gypsy 1 558 0 6 632 3564 17 2 16 chrU 6271364 6271789 -3777248 + ACCORD_I LTR Gypsy 1 419 -5869 6 632 233 0 0 0 chrU 6271791 6271818 -3777219 + ACCORD_LTR LTR Gypsy 532 558 0 6 632 2852 73 205 2 chrU 6271818 6272272 -3776765 - TART LINE telomeric -6650 7827 7282 6 632 253 31 31 0 chrU 6272273 6272303 -3776734 + NINJA_LTR LTR Pao 1 31 -286 6 632 3724 37 0 0 chrU 6272303 6272758 -3776279 - PROTOP_B DNA P 0 1153 699 6 632 1934 71 62 22 chrU 6272758 6273030 -3776007 - BATUMI_I LTR Pao -679 7284 7002 6 632 4601 69 61 5 chrU 6273030 6273656 -3775381 - BATUMI_I LTR Pao 0 7963 7303 6 632 1555 37 10 5 chrU 6273679 6273871 -3775166 + BATUMI_I LTR Pao 6427 6619 -1344 6 632 4107 16 39 0 chrU 6273971 6274486 -3774551 - Invader2_I LTR Gypsy -4057 535 1 6 632 2427 11 0 0 chrU 6274486 6274752 -3774285 - Invader2_LTR LTR Gypsy 0 266 1 6 632 1083 62 14 0 chrU 6274752 6274890 -3774147 + PROTOP DNA P 373 512 -3968 6 632 26 30 0 0 chrU 6275052 6275085 -3773952 + AT_rich Low_complexity Low_complexity 1 33 0 6 632 27 73 0 0 chrU 6275125 6275180 -3773857 + AT_rich Low_complexity Low_complexity 1 55 0 6 632 3209 119 60 0 chrU 6276414 6276893 -3772144 + Gypsy12_I LTR Gypsy 2449 2956 -2590 6 632 5263 101 1 6 chrU 6276894 6277612 -3771425 + Gypsy12_I LTR Gypsy 1364 2078 -3468 6 632 324 125 0 0 chrU 6277618 6277666 -3771371 + Gypsy12_I LTR Gypsy 2405 2452 -3094 6 632 1798 115 0 0 chrU 6277675 6277919 -3771118 + Gypsy12_I LTR Gypsy 2689 2932 -2614 6 632 4598 197 32 24 chrU 6278019 6281960 -3767077 - SAR_DM Satellite Satellite -500 3970 1 6 632 3840 200 34 26 chrU 6282081 6283093 -3765944 - SAR_DM Satellite Satellite -396 1076 57 6 632 802 297 13 10 chrU 6282826 6283132 -3765905 + XDMR_DM Unknown Unknown 6 312 -48 6 632 4442 208 40 19 chrU 6283329 6285992 -3763045 - SAR_DM Satellite Satellite -725 2719 1 6 632 2568 32 0 6 chrU 6286092 6286404 -3762633 + CIRCE LINE Composite 4671 4980 -1376 6 632 1755 50 5 5 chrU 6286596 6286815 -3762222 - R1_DM LINE R1 -4037 1319 1101 6 632 3294 72 5 7 chrU 6286810 6287246 -3761791 - R1_DM LINE R1 -4921 435 1 6 632 3324 24 77 0 chrU 6287279 6288020 -3761017 - R1_DM LINE R1 0 5356 4559 6 632 5554 21 1 9 chrU 6288018 6288678 -3760359 - R1_DM LINE R1 -1270 4086 3432 6 632 11424 23 14 0 chrU 6288698 6290018 -3759019 - R1_DM LINE R1 -2067 3289 1951 6 632 1620 1 1 0 chrU 6290118 6290802 -3758235 + (TTATA)n Simple_repeat Simple_repeat 1 685 0 6 9 8815 51 33 6 chrU 6290804 6292014 -3757023 + TAHRE LINE telomeric 739 2041 -8422 6 633 17482 26 0 1 chrU 6292014 6294042 -3754995 + TAHRE LINE telomeric 2362 4387 -6076 6 633 901 92 0 0 chrU 6294142 6294272 -3754765 - ARS406_DM Unknown Unknown -223 130 1 6 633 4381 217 24 30 chrU 6294176 6298063 -3750974 + SAR_DM Satellite Satellite 1 3863 -225 6 633 2424 93 13 75 chrU 6298163 6298711 -3750326 - DMSAT6 Satellite Satellite -102 514 1 6 633 2665 90 32 7 chrU 6298739 6300530 -3748507 - DMSAT6 Satellite Satellite 0 1835 1 6 633 2474 111 26 2 chrU 6300755 6301253 -3747784 - DMSAT6 Satellite Satellite -279 510 1 6 633 2648 100 19 31 chrU 6301280 6302076 -3746961 - DMSAT6 Satellite Satellite 0 786 1 6 633 4923 2 0 0 chrU 6302176 6302716 -3746321 - G2_DM LINE Jockey -750 2352 1813 6 633 4658 198 21 28 chrU 6302726 6305543 -3743494 - SAR_DM Satellite Satellite -196 2799 1 6 633 4983 2 2 0 chrU 6305540 6306089 -3742948 - G2_DM LINE Jockey -1 3101 2552 6 633 2819 15 3 0 chrU 6306189 6306514 -3742523 + PROTOP_A DNA P 159 484 -621 6 633 810 11 0 10 chrU 6306510 6306606 -3742431 + G5A_DM LINE Jockey 2747 2841 0 6 633 522 68 41 0 chrU 6306628 6306701 -3742336 + DNAREP1_DM LINE Penelope 519 594 0 6 633 256 119 17 17 chrU 6307988 6308048 -3740989 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 633 734 127 16 0 chrU 6308363 6308484 -3740553 + FB4_DM DNA Tc1 1153 1275 -2814 6 633 759 93 262 0 chrU 6308484 6308632 -3740405 - DNAREP1_DM LINE Penelope 0 594 431 6 633 1507 154 144 19 chrU 6308637 6309120 -3739917 - DNAREP1_DM LINE Penelope -218 376 1 6 633 1303 177 101 16 chrU 6309111 6309447 -3739590 - DNAREP1_DM LINE Penelope -265 329 1 6 633 277 181 22 98 chrU 6309480 6309572 -3739465 - DNAREP1_DM LINE Penelope -303 291 207 6 633 535 101 11 22 chrU 6309577 6309668 -3739369 - DNAREP1_DM LINE Penelope -329 265 176 6 633 1820 0 0 0 chrU 6309682 6309880 -3739157 - Copia2_LTR_DM LTR Copia 0 198 1 6 633 1485 40 0 0 chrU 6309894 6310067 -3738970 - Copia2_I LTR Copia -1088 3074 2902 6 633 237 0 0 0 chrU 6310067 6310095 -3738942 + PROTOP_B DNA P 1 28 -1125 6 633 929 19 0 0 chrU 6310817 6310921 -3738116 - FROGGER_LTR LTR Copia -99 104 1 6 633 3337 105 0 0 chrU 6310922 6311412 -3737625 + TRANSIB3 DNA Transib 1632 2163 -720 6 633 2015 109 47 30 chrU 6311412 6311773 -3737264 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 633 4986 246 61 67 chrU 6311773 6314099 -3734938 + ROVER-I_DM LTR Gypsy 1 2312 -4272 6 633 2518 99 4 45 chrU 6314199 6316075 -3732962 + DMSAT6 Satellite Satellite 1 1799 -3 6 633 2355 99 11 42 chrU 6316105 6316628 -3732409 + DMSAT6 Satellite Satellite 1 507 0 6 633 10355 98 36 9 chrU 6316627 6318071 -3730966 + Gypsy12_I LTR Gypsy 3864 5346 -200 6 633 3200 24 0 0 chrU 6318171 6318548 -3730489 - PROTOP_A DNA P -508 597 221 6 633 1320 116 0 93 chrU 6318569 6318816 -3730221 - DIVER_LTR LTR Pao 0 224 1 6 633 1295 95 26 5 chrU 6318816 6319006 -3730031 - PROTOP_A DNA P -880 225 32 6 633 4011 38 8 1 chrU 6318986 6319690 -3729347 - Baggins1 LINE LOA -1283 4170 3399 6 633 673 518 155 0 chrU 6319685 6319936 -3729101 - Baggins1 LINE LOA -2133 3320 3031 6 633 2967 22 181 10 chrU 6319936 6320351 -3728686 + FB4_DM DNA Tc1 3604 4089 0 6 633 12333 53 56 1 chrU 6320367 6321926 -3727111 - Baggins1 LINE LOA -3257 2196 552 6 633 443 221 39 0 chrU 6321927 6322031 -3727006 - ZAM_LTR LTR Gypsy 0 472 365 6 633 2305 32 4 4 chrU 6322142 6322422 -3726615 + IDEFIX_LTR LTR Gypsy 315 594 0 6 633 25 0 0 0 chrU 6322600 6322625 -3726412 + AT_rich Low_complexity Low_complexity 1 25 0 6 633 7231 42 35 0 chrU 6322967 6323870 -3725167 + IDEFIX_I LTR Gypsy 1 935 -4693 6 633 12885 50 82 3 chrU 6323867 6326006 -3723031 + IDEFIX_I LTR Gypsy 1364 3672 -1956 6 633 9466 151 119 47 chrU 6326106 6328454 -3720583 + TART LINE telomeric 4699 6653 -7824 6 633 2431 128 13 10 chrU 6328462 6328856 -3720181 + TART LINE telomeric 6889 7283 -7194 6 633 2597 38 0 28 chrU 6328869 6329195 -3719842 - NINJA_LTR LTR Pao 0 317 1 6 633 4006 35 14 2 chrU 6329195 6329687 -3719350 - NINJA_I LTR Pao 0 6011 5514 6 633 2306 40 0 0 chrU 6329686 6329964 -3719073 - NINJA_I LTR Pao -3137 2874 2597 6 633 2839 134 6 11 chrU 6330065 6330531 -3718506 + TAHRE LINE telomeric 9991 10454 -9 6 633 30341 8 0 0 chrU 6330523 6333895 -3715142 + TAHRE LINE telomeric 3935 7306 -3157 6 633 1949 36 116 0 chrU 6333995 6334245 -3714792 + M4DM DNA Transib 821 1099 -336 6 633 299 114 0 0 chrU 6334250 6334294 -3714743 - DNAREP1_DM LINE Penelope -550 44 1 6 633 329 250 45 0 chrU 6334500 6334588 -3714449 + DIVER2_I LTR Pao 4022 4113 -34 6 633 287 280 129 0 chrU 6334906 6334999 -3714038 + FROGGER_I LTR Copia 174 278 -1799 6 633 1624 291 29 40 chrU 6335153 6335772 -3713265 + FROGGER_I LTR Copia 604 1215 -862 6 633 1168 297 92 34 chrU 6335880 6336522 -3712515 + FROGGER_I LTR Copia 1357 2035 -42 6 633 21 57 0 0 chrU 6336580 6336615 -3712422 + AT_rich Low_complexity Low_complexity 1 35 0 6 633 6013 57 49 9 chrU 6337002 6337814 -3711223 + M4DM DNA Transib 1 845 -590 6 633 3866 204 32 61 chrU 6337923 6339338 -3709699 + SAR_DM Satellite Satellite 1 1374 -396 6 633 3646 5 0 2 chrU 6339353 6339756 -3709281 + STALKER4_LTR LTR Gypsy 1 402 0 6 633 3430 161 24 15 chrU 6339810 6340534 -3708503 + SAR_DM Satellite Satellite 347 1076 -396 6 633 2653 208 70 38 chrU 6340550 6341732 -3707305 + SAR_DM Satellite Satellite 1 1219 -396 6 633 11745 8 2 0 chrU 6341834 6343110 -3705927 - MICROPIA_I LTR Gypsy -3197 1279 1 6 633 4110 15 0 61 chrU 6343110 6343617 -3705420 - MICROPIA_LTR LTR Gypsy 0 476 1 6 633 13688 138 60 0 chrU 6343617 6345641 -3703396 - ROO_I LTR Pao -3545 4711 2567 6 633 2740 114 11 26 chrU 6345741 6346345 -3702692 - DMSAT6 Satellite Satellite -249 594 1 6 633 2778 103 16 36 chrU 6346363 6349547 -3699490 - DMSAT6 Satellite Satellite 0 3119 1 6 633 39 22 0 0 chrU 6350560 6350606 -3698431 + AT_rich Low_complexity Low_complexity 1 46 0 6 633 675 311 139 24 chrU 6350895 6351319 -3697718 + DM1731_I LTR Copia 1386 1858 -2118 6 633 1294 191 51 49 chrU 6351541 6352034 -3697003 + DNAREP1_DM LINE Penelope 108 589 -5 6 633 1303 54 356 2 chrU 6352193 6352585 -3696452 - PROTOP_B DNA P 0 1153 624 6 633 2923 23 63 0 chrU 6352585 6352733 -3696304 - Stalker3_LTR LTR Gypsy 0 372 225 6 633 186 43 0 0 chrU 6352733 6352756 -3696281 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 6 633 2923 23 63 0 chrU 6352756 6352957 -3696080 - Stalker3_LTR LTR Gypsy -148 224 2 6 633 293 50 0 0 chrU 6352957 6352997 -3696040 - STALKER4_I LTR Gypsy 0 6530 6491 6 633 290 187 12 77 chrU 6353006 6353174 -3695863 + T-rich Low_complexity Low_complexity 1 157 0 6 633 32 26 0 0 chrU 6353211 6353250 -3695787 + AT_rich Low_complexity Low_complexity 1 39 0 6 633 7548 35 3 0 chrU 6353553 6354427 -3694610 + DMRT1B LINE R1 4307 5183 0 6 633 265 379 30 21 chrU 6354852 6355189 -3693848 + ACCORD_I LTR Gypsy 1399 1738 -4550 6 633 403 290 76 81 chrU 6355394 6355822 -3693215 + ACCORD_I LTR Gypsy 1978 2724 -4766 6 633 1115 326 63 26 chrU 6356124 6357176 -3691861 + ZAM_I LTR Gypsy 4905 5986 -1706 6 633 8371 26 4 2 chrU 6357458 6358421 -3690616 + R1_DM LINE R1 3699 4663 -693 6 633 2428 29 14 0 chrU 6358414 6358693 -3690344 + R1_DM LINE R1 5074 5356 0 6 633 21168 40 1 4 chrU 6358726 6361233 -3687804 + R1_DM LINE R1 1 2501 -2855 6 633 1985 149 38 26 chrU 6361333 6361724 -3687313 - STALKER4_I LTR Gypsy -5787 743 235 6 633 38 39 0 0 chrU 6361725 6361777 -3687260 + AT_rich Low_complexity Low_complexity 1 52 0 6 633 3353 55 1 14 chrU 6361865 6362304 -3686733 - STALKER4_LTR LTR Gypsy -3 399 1 6 633 7871 9 0 10 chrU 6362304 6363212 -3685825 - Gypsy4_I LTR Gypsy -5389 899 1 6 633 2472 18 4 0 chrU 6363231 6363507 -3685530 - Gypsy4_LTR LTR Gypsy -10 277 1 6 633 3835 28 2 4 chrU 6363512 6363976 -3685061 - IDEFIX_LTR LTR Gypsy 0 594 132 6 633 8565 59 9 1 chrU 6363975 6365107 -3683930 - IDEFIX_I LTR Gypsy -558 5070 3930 6 633 2247 23 0 0 chrU 6365207 6365463 -3683574 + MDG1_LTR LTR Gypsy 187 442 0 6 633 1024 320 25 18 chrU 6365481 6366044 -3682993 + Gypsy5_I LTR Gypsy 1964 2530 -3979 6 633 1449 158 126 34 chrU 6366038 6366419 -3682618 - MDG1_LTR LTR Gypsy -24 418 3 6 633 244 30 0 0 chrU 6366453 6366486 -3682551 - MDG1_I LTR Gypsy -21 6575 6543 6 633 238 165 27 9 chrU 6366837 6366947 -3682090 - MDG1_I LTR Gypsy -45 6551 6440 6 633 15214 52 20 2 chrU 6366950 6368961 -3680076 - MDG1_I LTR Gypsy -301 6295 4250 6 633 12777 21 50 1 chrU 6369062 6372807 -3676230 + R1_DM LINE R1 675 4605 -751 6 633 2622 116 19 24 chrU 6372907 6376642 -3672395 - DMSAT6 Satellite Satellite -157 3716 1 6 633 9128 21 4 4 chrU 6376744 6377786 -3671251 + CIRCE LINE Composite 2999 4040 -2316 6 633 2839 40 0 8 chrU 6377776 6378133 -3670904 + CIRCE LINE Composite 4627 4980 -1376 6 633 5450 75 42 4 chrU 6378323 6379524 -3669513 - R1_DM LINE R1 -4037 1319 1 6 633 8046 27 2 1 chrU 6379557 6380474 -3668563 - R1_DM LINE R1 0 5356 4439 6 633 5722 41 0 0 chrU 6380574 6381238 -3667799 + MAX_I LTR Pao 2265 2928 -4986 6 633 26620 33 9 2 chrU 6381235 6384291 -3664746 + MAX_I LTR Pao 3199 6275 -1639 6 633 18078 37 4 19 chrU 6384391 6386590 -3662447 - TART_B1 LINE telomeric -2848 11629 8044 6 633 13397 11 0 4 chrU 6386600 6388107 -3660930 - TART_B1 LINE telomeric -2608 8046 6546 6 633 310 118 0 0 chrU 6388207 6388258 -3660779 - PROTOP_B DNA P -683 470 420 6 633 6989 93 41 57 chrU 6388258 6389430 -3659607 - PROTOP_B DNA P 0 1153 1 6 633 28 71 0 0 chrU 6390500 6390556 -3658481 + AT_rich Low_complexity Low_complexity 1 56 0 6 633 23 68 0 0 chrU 6390594 6390638 -3658399 + AT_rich Low_complexity Low_complexity 1 44 0 6 633 3431 18 18 0 chrU 6390638 6391023 -3658014 + Invader6_LTR LTR Gypsy 1 392 -1 6 633 8096 9 12 1 chrU 6391024 6391920 -3657117 + Invader6_I LTR Gypsy 1 906 -3193 6 633 467 65 0 0 chrU 6392046 6392108 -3656929 - Gypsy12_I LTR Gypsy -3 5543 5482 6 633 1895 103 4 0 chrU 6392097 6392359 -3656678 - Gypsy12_I LTR Gypsy -4543 1003 741 6 633 292 330 24 89 chrU 6392446 6392692 -3656345 + ACCORD2_I LTR Gypsy 526 755 -6457 6 633 800 326 47 28 chrU 6392719 6393183 -3655854 + MICROPIA_I LTR Gypsy 1 473 -4003 6 633 478 305 53 46 chrU 6393359 6393689 -3655348 + MICROPIA_I LTR Gypsy 775 1121 -2978 6 633 686 224 13 13 chrU 6393689 6393838 -3655199 + MICROPIA_I LTR Gypsy 1561 1709 -2767 6 633 3474 313 35 36 chrU 6393851 6395407 -3653630 + MICROPIA_I LTR Gypsy 2408 3962 -514 6 633 21 57 0 0 chrU 6395618 6395653 -3653384 + AT_rich Low_complexity Low_complexity 1 35 0 6 633 3797 0 2 0 chrU 6395831 6396245 -3652792 - FW_DM LINE Jockey -4277 415 1 6 633 10627 208 45 11 chrU 6396265 6399160 -3649877 + DM412 LTR Gypsy 3407 6796 -101 6 633 46 0 0 0 chrU 6399178 6399224 -3649813 + AT_rich Low_complexity Low_complexity 1 46 0 6 633 785 0 0 0 chrU 6399639 6399723 -3649314 + DM176_I LTR Gypsy 6337 6420 0 6 633 4582 10 0 0 chrU 6399723 6400230 -3648807 + DM176_LTR LTR Gypsy 1 507 0 6 633 718 295 112 0 chrU 6400244 6400529 -3648508 - Gypsy12_I LTR Gypsy -2352 3194 2878 6 633 254 231 0 0 chrU 6400644 6400696 -3648341 - Gypsy12_I LTR Gypsy -3433 2113 2062 6 633 367 12 86 12 chrU 6401824 6401905 -3647132 + (TA)n Simple_repeat Simple_repeat 1 87 0 6 633 3592 7 7 7 chrU 6401905 6402318 -3646719 - DM297_LTR LTR Gypsy -1 413 1 6 633 8733 8 2 0 chrU 6402318 6403331 -3645706 - DM297_I LTR Gypsy 0 6167 5153 6 633 632 112 0 0 chrU 6403431 6403520 -3645517 - Gypsy12_I LTR Gypsy -1628 3918 3830 6 633 6851 93 0 6 chrU 6403541 6404453 -3644584 - Gypsy12_I LTR Gypsy -1829 3717 2811 6 633 1739 72 0 0 chrU 6404444 6404666 -3644371 - Gypsy12_I LTR Gypsy -2876 2670 2449 6 633 269 75 434 0 chrU 6404656 6404709 -3644328 - PROTOP_B DNA P -1077 76 1 6 633 22 88 0 0 chrU 6405763 6405820 -3643217 + AT_rich Low_complexity Low_complexity 1 57 0 6 633 30 59 0 0 chrU 6405858 6405909 -3643128 + AT_rich Low_complexity Low_complexity 1 51 0 6 633 26 30 0 0 chrU 6405955 6405988 -3643049 + AT_rich Low_complexity Low_complexity 1 33 0 6 633 4112 47 12 0 chrU 6406122 6406628 -3642409 - PROTOP DNA P -3968 512 1 6 633 325 146 41 34 chrU 6406768 6406869 -3642168 - TART LINE telomeric -3992 10485 10421 6 633 572 131 69 11 chrU 6406921 6407063 -3641974 - TART LINE telomeric -3986 10491 10370 6 633 26 0 0 0 chrU 6407626 6407652 -3641385 + AT_rich Low_complexity Low_complexity 1 26 0 6 633 244 88 0 0 chrU 6407820 6407854 -3641183 - HMSBEAGLE_I LTR Gypsy -92 6437 6404 6 633 286 186 27 67 chrU 6407952 6408027 -3641010 - HMSBEAGLE_I LTR Gypsy -124 6405 6334 6 633 1603 197 85 74 chrU 6408261 6408814 -3640223 - HMSBEAGLE_I LTR Gypsy -161 6368 5810 6 633 1576 112 5 5 chrU 6409519 6409743 -3639294 - HMSBEAGLE_I LTR Gypsy -1243 5286 5063 6 633 4000 117 42 0 chrU 6409752 6410342 -3638695 - HMSBEAGLE_I LTR Gypsy -1814 4715 4101 6 633 1305 120 0 0 chrU 6410341 6410524 -3638513 - HMSBEAGLE_I LTR Gypsy -2564 3965 3783 6 633 308 200 97 65 chrU 6410553 6410708 -3638329 - BS LINE Jockey -2952 2174 2015 6 633 355 200 0 0 chrU 6410833 6410903 -3638134 - BS LINE Jockey -3024 2102 2033 6 633 465 36 0 0 chrU 6412118 6412173 -3636864 - TART LINE telomeric -769 13708 13654 6 633 9535 27 1 1 chrU 6412722 6413827 -3635210 - PROTOP_A DNA P 0 1105 1 6 633 633 213 20 0 chrU 6413828 6413978 -3635059 - IDEFIX_I LTR Gypsy -4677 951 799 6 633 633 236 221 0 chrU 6413978 6414182 -3634855 - IDEFIX_I LTR Gypsy -5379 249 1 6 633 3856 29 0 2 chrU 6414212 6414663 -3634374 + NINJA_I LTR Pao 1955 2404 -3607 6 633 1829 71 0 19 chrU 6414763 6415023 -3634014 + BATUMI_I LTR Pao 7709 7963 0 6 633 1816 46 4 32 chrU 6415045 6415293 -3633744 + BATUMI_LTR LTR Pao 32 272 0 6 633 1134 139 32 14 chrU 6415520 6415739 -3633298 + DIVER_LTR LTR Pao 2 224 0 6 633 1279 18 5 0 chrU 6415760 6415938 -3633099 + DIVER_I LTR Pao 1 221 -5422 6 633 19765 36 40 3 chrU 6416029 6418413 -3630624 + DIVER_I LTR Pao 455 2926 -2717 6 633 618 175 8 8 chrU 6418513 6418640 -3630397 - ARS406_DM Unknown Unknown -226 127 1 6 633 4265 204 35 25 chrU 6418533 6419925 -3629112 + SAR_DM Satellite Satellite 1 1405 -203 6 633 839 296 0 11 chrU 6419862 6420053 -3628984 - ARS406_DM Unknown Unknown -164 189 1 6 633 4153 206 31 18 chrU 6419966 6422162 -3626875 + SAR_DM Satellite Satellite 1 2225 -208 6 79 2708 98 36 24 chrU 6422264 6425910 -3623127 + DMSAT6 Satellite Satellite 1 3689 -105 6 634 30 43 0 54 chrU 6426508 6426582 -3622455 + AT_rich Low_complexity Low_complexity 1 70 0 6 634 33 25 0 0 chrU 6426647 6426687 -3622350 + AT_rich Low_complexity Low_complexity 1 40 0 6 634 1522 330 20 8 chrU 6427112 6427768 -3621269 + HMSBEAGLE_I LTR Gypsy 1450 2113 -4416 6 634 3711 295 56 18 chrU 6428000 6429596 -3619441 + HMSBEAGLE_I LTR Gypsy 2670 4326 -2203 6 634 344 89 0 0 chrU 6429756 6429801 -3619236 - HOBO DNA hAT -1219 1797 1753 6 634 9333 90 12 4 chrU 6429809 6431106 -3617931 - HOBO DNA hAT -1380 1636 330 6 634 2048 100 193 20 chrU 6431083 6431477 -3617560 - PROTOP_B DNA P -675 478 17 6 634 2491 0 0 0 chrU 6431495 6431761 -3617276 - Invader2_LTR LTR Gypsy 0 266 1 6 634 7614 63 17 4 chrU 6431761 6432942 -3616095 - Invader2_I LTR Gypsy -156 4732 3320 6 634 4005 4 2 0 chrU 6432942 6433396 -3615641 - Invader2_I LTR Gypsy -1886 2706 2252 6 634 47 0 0 0 chrU 6434047 6434094 -3614943 + AT_rich Low_complexity Low_complexity 1 47 0 6 634 5746 30 10 2 chrU 6434532 6435248 -3613789 + PROTOP_A DNA P 388 1104 -1 6 634 2842 13 0 0 chrU 6435248 6435562 -3613475 - Invader3_I LTR Gypsy -1748 3140 2827 6 634 8795 6 0 3 chrU 6435561 6436534 -3612503 - DOC LINE Jockey -8 4717 3748 6 634 3277 3 0 24 chrU 6436534 6436910 -3612127 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 634 2013 5 0 0 chrU 6436910 6437134 -3611903 - ROVER-I_DM LTR Gypsy 0 6584 6361 6 634 2850 106 25 11 chrU 6437238 6438446 -3610591 + DMSAT6 Satellite Satellite 1 1225 -130 6 634 2646 110 21 13 chrU 6438462 6440855 -3608182 + DMSAT6 Satellite Satellite 1 2412 0 6 634 471 155 0 0 chrU 6441252 6441323 -3607714 - TAHRE LINE telomeric -2867 7596 7526 6 634 9383 23 8 4 chrU 6441584 6442684 -3606353 + PROTOP_A DNA P 1 1105 0 6 634 487 292 244 12 chrU 6442684 6443087 -3605950 - Copia_I LTR Copia -2697 1896 1400 6 634 1016 323 51 21 chrU 6443681 6444408 -3604629 - Copia_I LTR Copia -3689 904 156 6 634 899 37 9 0 chrU 6444678 6444786 -3604251 + R1_DM LINE R1 4174 4282 -1074 6 634 8438 21 1 0 chrU 6444806 6445755 -3603282 + R1_DM LINE R1 4407 5356 0 6 634 4818 63 5 13 chrU 6445788 6446414 -3602623 + R1_DM LINE R1 1 621 -4735 6 634 15890 36 10 1 chrU 6446422 6448281 -3600756 + R1_DM LINE R1 1032 2908 -2448 6 634 3768 92 61 12 chrU 6448381 6448967 -3600070 - MDG1_I LTR Gypsy -5981 615 1 6 634 2069 91 74 3 chrU 6448967 6449265 -3599772 - MDG1_LTR LTR Gypsy -30 412 94 6 634 360 88 0 0 chrU 6449267 6449324 -3599713 + (TTA)n Simple_repeat Simple_repeat 3 59 0 6 634 3349 40 0 0 chrU 6450607 6451002 -3598035 + ZAM_I LTR Gypsy 1680 2074 -5416 6 634 6626 66 51 18 chrU 6451003 6451961 -3597076 + ZAM_I LTR Gypsy 695 1684 -5806 6 634 8769 13 1 2 chrU 6452084 6453066 -3595971 - G_DM LINE Jockey -713 3633 2653 6 634 266 196 0 19 chrU 6453113 6453165 -3595872 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 6 634 1084 22 0 41 chrU 6453238 6453383 -3595654 + NTS_DM Other Other 25 163 -77 6 634 485 161 42 51 chrU 6453491 6453609 -3595428 + NTS_DM Other Other 4 120 -120 6 634 7104 137 25 42 chrU 6453784 6455686 -3593351 + G2_DM LINE Jockey 4 2076 -2270 6 634 229 118 0 0 chrU 6455786 6455820 -3593217 - ARS406_DM Unknown Unknown -185 168 135 6 634 1079 16 0 0 chrU 6455824 6455953 -3593084 + BS LINE Jockey 4998 5126 0 6 634 4161 204 36 22 chrU 6455969 6458024 -3591013 + SAR_DM Satellite Satellite 1 2084 -203 6 634 1079 16 0 0 chrU 6458026 6458155 -3590882 + BS LINE Jockey 4998 5126 0 6 634 3938 198 25 18 chrU 6458172 6459376 -3589661 + SAR_DM Satellite Satellite 1 1212 -203 6 634 303 89 0 0 chrU 6459479 6459524 -3589513 - ARS406_DM Unknown Unknown -308 45 1 6 634 4312 209 22 31 chrU 6459484 6463020 -3586017 + SAR_DM Satellite Satellite 1 3504 -216 6 634 1040 45 0 0 chrU 6462929 6463061 -3585976 - ARS406_DM Unknown Unknown -164 189 58 6 634 1255 143 8 12 chrU 6463161 6463408 -3585629 + DMSAT6 Satellite Satellite 200 445 -25 6 634 2654 95 9 41 chrU 6463419 6464291 -3584746 + DMSAT6 Satellite Satellite 1 843 -3 6 634 2578 116 12 40 chrU 6464306 6466734 -3582303 + DMSAT6 Satellite Satellite 1 2359 0 6 634 1967 129 11 24 chrU 6467585 6467954 -3581083 - DNAREP1_DM LINE Penelope -267 327 1 6 634 334 146 0 0 chrU 6467968 6468023 -3581014 + R1_DM LINE R1 225 279 -5077 6 634 5337 149 195 16 chrU 6468069 6469156 -3579881 + R1_DM LINE R1 560 1841 -3515 6 634 3579 74 22 0 chrU 6469154 6469615 -3579422 + R1_DM LINE R1 2126 2596 -2760 6 634 1747 109 0 4 chrU 6469613 6469871 -3579166 - DMRT1C LINE R1 -2262 3181 2925 6 634 1686 104 157 6 chrU 6469863 6470354 -3578683 - DMRT1C LINE R1 -2956 2487 1923 6 634 16424 22 20 4 chrU 6470494 6472386 -3576651 - Copia2_I LTR Copia -952 3210 1289 6 634 9618 22 35 0 chrU 6472385 6473513 -3575524 - Copia2_I LTR Copia -2994 1168 1 6 634 1629 6 0 0 chrU 6473513 6473693 -3575344 - Copia2_LTR_DM LTR Copia 0 198 19 6 634 40 21 0 0 chrU 6473876 6473923 -3575114 + AT_rich Low_complexity Low_complexity 1 47 0 6 634 1044 43 0 54 chrU 6474151 6474300 -3574737 + IDEFIX_I LTR Gypsy 5488 5628 0 6 634 2474 37 0 0 chrU 6474300 6474598 -3574439 + IDEFIX_LTR LTR Gypsy 1 298 -296 6 634 4522 115 78 26 chrU 6474598 6475341 -3573696 + HETA LINE telomeric 5270 6051 -30 6 634 12347 65 49 12 chrU 6475340 6477090 -3571947 + TART LINE telomeric 8848 10662 -3815 6 634 3369 97 58 29 chrU 6477087 6477705 -3571332 + HETA LINE telomeric 19 654 -5427 6 634 533 227 0 52 chrU 6477806 6477941 -3571096 - HETRP_DM Satellite Satellite -227 1645 1518 6 634 697 200 11 68 chrU 6478042 6478219 -3570818 - HETRP_DM Satellite Satellite -188 1684 1518 6 634 454 258 15 22 chrU 6478321 6478456 -3570581 - HETRP_DM Satellite Satellite -190 1682 1549 6 634 192 40 0 0 chrU 6478456 6478481 -3570556 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 634 664 200 7 14 chrU 6478612 6478754 -3570283 - HETRP_DM Satellite Satellite -203 1669 1529 6 634 543 233 7 22 chrU 6478903 6479039 -3569998 - HETRP_DM Satellite Satellite -190 1682 1549 6 634 228 35 0 0 chrU 6479039 6479068 -3569969 + (TC)n Simple_repeat Simple_repeat 2 30 0 6 634 3890 5 2 0 chrU 6479186 6479608 -3569429 + Invader1_LTR LTR Gypsy 1 423 0 6 634 676 202 11 69 chrU 6479611 6479786 -3569251 - HETRP_DM Satellite Satellite -190 1682 1518 6 634 496 242 15 22 chrU 6479888 6480023 -3569014 - HETRP_DM Satellite Satellite -190 1682 1549 6 634 264 30 0 0 chrU 6480023 6480056 -3568981 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 634 501 242 8 8 chrU 6480187 6480308 -3568729 - HETRP_DM Satellite Satellite -203 1669 1549 6 634 264 30 0 0 chrU 6480308 6480341 -3568696 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 634 657 200 7 14 chrU 6480499 6480641 -3568396 - HETRP_DM Satellite Satellite -203 1669 1529 6 634 520 240 0 8 chrU 6480802 6480924 -3568113 - HETRP_DM Satellite Satellite -203 1669 1549 6 634 210 37 0 0 chrU 6480924 6480951 -3568086 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 634 2656 3 3 0 chrU 6481069 6481358 -3567679 + Invader1_LTR LTR Gypsy 1 290 -133 6 634 2916 100 11 28 chrU 6481458 6485010 -3564027 - DMSAT6 Satellite Satellite -10 3492 1 6 634 401 304 51 22 chrU 6485114 6485323 -3563714 + Gypsy4_I LTR Gypsy 3248 3393 -2895 6 634 243 266 73 61 chrU 6485777 6485941 -3563096 + Gypsy6_I LTR Gypsy 4541 4706 -2306 6 634 678 54 21 11 chrU 6487648 6487742 -3561295 - BATUMI_LTR LTR Pao 0 272 178 6 634 6681 62 26 9 chrU 6487760 6488664 -3560373 + MDG1_I LTR Gypsy 73 992 -5604 6 634 1094 23 8 0 chrU 6488764 6488895 -3560142 - DMRT1B LINE R1 -139 5044 4913 6 634 15037 11 18 0 chrU 6488892 6490576 -3558461 - DMRT1B LINE R1 -680 4503 2790 6 634 15722 11 0 0 chrU 6490571 6492313 -3556724 - DMRT1B LINE R1 -2563 2620 879 6 634 14152 107 26 16 chrU 6492413 6494494 -3554543 - Gypsy12_I LTR Gypsy -2562 2984 882 6 634 496 111 0 14 chrU 6494812 6494885 -3554152 - Gypsy12_I LTR Gypsy -5016 530 459 6 634 1951 88 18 55 chrU 6494898 6495224 -3553813 - Gypsy12_I LTR Gypsy -5206 340 27 6 634 1851 196 15 20 chrU 6495194 6495594 -3553443 - Gypsy12_LTR LTR Gypsy -1938 398 1 6 634 2652 93 0 8 chrU 6495593 6495950 -3553087 - Gypsy12_I LTR Gypsy 0 5546 5193 6 634 18110 58 50 2 chrU 6496050 6496563 -3552474 + IDEFIX_I LTR Gypsy 102 614 -5014 6 634 183 42 0 0 chrU 6496563 6496587 -3552450 + (TTA)n Simple_repeat Simple_repeat 3 26 0 6 634 18110 58 50 2 chrU 6496587 6498456 -3550581 + IDEFIX_I LTR Gypsy 615 2597 -3031 6 634 1210 78 0 18 chrU 6498455 6498625 -3550412 + IDEFIX_I LTR Gypsy 2704 2870 -2758 6 634 4805 93 78 5 chrU 6498637 6499577 -3549460 + IDEFIX_I LTR Gypsy 3297 4304 -1324 6 634 2981 6 0 0 chrU 6499677 6500000 -3549037 - MICROPIA_I LTR Gypsy -3798 678 356 6 634 3338 0 0 0 chrU 6500000 6500355 -3548682 - MICROPIA_I LTR Gypsy -4121 355 1 6 634 4211 2 0 61 chrU 6500355 6500862 -3548175 - MICROPIA_LTR LTR Gypsy 0 476 1 6 634 2195 22 32 11 chrU 6500862 6501142 -3547895 + ACCORD2_I LTR Gypsy 1081 1366 -5846 6 634 1073 42 235 23 chrU 6501223 6501444 -3547593 + ACCORD2_I LTR Gypsy 1507 1774 -5438 6 634 1081 33 203 16 chrU 6501455 6501642 -3547395 + ACCORD2_I LTR Gypsy 1553 1774 -5438 6 634 639 83 0 0 chrU 6501635 6501717 -3547320 + ACCORD2_I LTR Gypsy 7122 7203 -9 6 634 1845 23 0 18 chrU 6501717 6501935 -3547102 + ACCORD2_LTR LTR Gypsy 1 214 -1 6 634 10633 31 10 0 chrU 6501936 6503180 -3545857 + R1_DM LINE R1 2422 3677 -1679 6 634 226 297 76 54 chrU 6503349 6503534 -3545503 - Copia2_I LTR Copia -3783 379 191 6 634 545 267 36 20 chrU 6504019 6504214 -3544823 - Copia2_I LTR Copia -97 4065 3868 6 634 3048 303 72 45 chrU 6504207 6506355 -3542682 - Copia2_I LTR Copia -1401 2761 521 6 634 4051 32 2 6 chrU 6506930 6507406 -3541631 + R1_DM LINE R1 2880 3353 -2003 6 634 10083 26 52 1 chrU 6507397 6509106 -3539931 + R1_DM LINE R1 3561 5356 0 6 634 10428 51 23 3 chrU 6509139 6510451 -3538586 + R1_DM LINE R1 1 1338 -4018 6 634 5915 188 64 14 chrU 6511017 6511972 -3537065 - DIVER2_I LTR Pao -1716 2431 1429 6 634 3505 185 65 75 chrU 6511976 6512993 -3536044 + Gypsy12_LTR LTR Gypsy 1330 2336 0 6 634 4879 36 5 19 chrU 6513041 6513633 -3535404 - DIVER2_I LTR Pao -1147 3000 2417 6 634 2572 295 14 16 chrU 6514189 6515063 -3533974 - Invader4_I LTR Gypsy -1541 872 1 6 634 629 67 11 22 chrU 6515588 6515680 -3533357 + BS3_DM LINE Jockey 1700 1790 0 6 634 29 47 0 0 chrU 6515779 6515822 -3533215 + AT_rich Low_complexity Low_complexity 1 43 0 6 634 598 300 76 10 chrU 6516484 6516774 -3532263 + Gypsy5_I LTR Gypsy 2248 2556 -3953 6 634 523 317 8 2 chrU 6516768 6516955 -3532082 + Gypsy5_I LTR Gypsy 2671 2912 -3597 6 634 401 299 51 29 chrU 6517246 6517621 -3531416 + Gypsy5_I LTR Gypsy 3847 4229 -2280 6 634 8487 61 20 0 chrU 6517776 6518849 -3530188 + TART_B1 LINE telomeric 2559 3652 -7002 6 634 12874 68 66 6 chrU 6519034 6520776 -3528261 + TART LINE telomeric 14 1859 -12618 6 634 4107 49 14 0 chrU 6520767 6521275 -3527762 + TART LINE telomeric 2045 2559 -11918 6 634 257 32 0 0 chrU 6521375 6521406 -3527631 + IDEFIX_I LTR Gypsy 5596 5626 -2 6 634 3896 25 146 2 chrU 6521407 6521926 -3527111 + IDEFIX_LTR LTR Gypsy 1 594 0 6 634 936 128 0 33 chrU 6521926 6522078 -3526959 + STALKER4_LTR LTR Gypsy 252 398 -4 6 634 777 20 140 0 chrU 6522076 6522176 -3526861 + DM297_I LTR Gypsy 5190 5303 -864 6 634 3053 143 21 13 chrU 6522175 6522708 -3526329 + Gypsy12_LTR LTR Gypsy 1729 2265 -71 6 634 2051 62 4 0 chrU 6522764 6523039 -3525998 + DM297_I LTR Gypsy 5892 6167 0 6 634 1194 91 256 72 chrU 6523039 6523289 -3525748 + DM297_LTR LTR Gypsy 1 296 -118 6 634 2505 216 41 59 chrU 6523307 6523997 -3525040 + Gypsy12_LTR LTR Gypsy 55 731 -1605 6 634 2557 226 96 30 chrU 6523986 6524870 -3524167 + Gypsy12_LTR LTR Gypsy 902 1843 -493 6 634 1098 16 0 0 chrU 6524974 6525101 -3523936 - FW_DM LINE Jockey -4100 592 466 6 634 7456 69 38 19 chrU 6525328 6526408 -3522629 + IDEFIX_I LTR Gypsy 1 1048 -4580 6 634 532 71 0 0 chrU 6526404 6526474 -3522563 + G5_DM LINE Jockey 904 973 -3883 6 634 11510 108 51 46 chrU 6526467 6528472 -3520565 + G5_DM LINE Jockey 1078 3092 -1764 6 634 4605 197 23 30 chrU 6528572 6532070 -3516967 - SAR_DM Satellite Satellite -227 3472 1 6 634 28833 13 29 1 chrU 6532170 6535438 -3513599 - DMRT1A LINE R1 -606 4577 1221 6 634 1947 9 0 0 chrU 6535442 6535660 -3513377 - DMRT1A LINE R1 -4204 979 762 6 634 12600 43 50 6 chrU 6535760 6538125 -3510912 - R1_DM LINE R1 -2886 2470 1 6 634 991 44 0 0 chrU 6538158 6538272 -3510765 - R1_DM LINE R1 0 5356 5243 6 634 5404 24 67 0 chrU 6538269 6539238 -3509799 - R1_DM LINE R1 -290 5066 4033 6 634 1158 134 2 0 chrU 6539338 6539776 -3509261 + (TA)n Simple_repeat Simple_repeat 1 439 0 6 634 247 298 0 0 chrU 6540231 6540315 -3508722 + Invader3_I LTR Gypsy 4059 4142 -746 6 634 3454 78 118 7 chrU 6540925 6541606 -3507431 - I_DM LINE I -4095 2136 1380 6 634 6511 71 80 2 chrU 6541603 6542575 -3506462 - I_DM LINE I -5085 1146 99 6 634 1346 76 54 5 chrU 6542630 6542815 -3506222 + Baggins1 LINE LOA 4205 4398 -1055 6 634 10981 23 2 0 chrU 6542915 6544156 -3504881 + R1_DM LINE R1 4114 5356 0 6 634 8945 50 10 3 chrU 6544189 6545294 -3503743 + R1_DM LINE R1 1 1113 -4243 6 634 8571 31 66 0 chrU 6545293 6546392 -3502645 + R1_DM LINE R1 1309 2480 -2876 6 634 12882 21 24 1 chrU 6546492 6547974 -3501063 + R1_DM LINE R1 2813 4328 -1028 6 634 5149 25 15 0 chrU 6547973 6548566 -3500471 + R1_DM LINE R1 4465 5066 -290 6 634 991 44 0 0 chrU 6548563 6548677 -3500360 + R1_DM LINE R1 5243 5356 0 6 634 5839 58 64 2 chrU 6548710 6549964 -3499073 + R1_DM LINE R1 1 1331 -4025 6 634 3213 221 24 14 chrU 6550065 6550844 -3498193 + ROVER-I_DM LTR Gypsy 1877 2663 -3921 6 634 12621 187 3 6 chrU 6550821 6553168 -3495869 + ROVER-I_DM LTR Gypsy 2969 5308 -1276 6 634 1450 187 9 0 chrU 6553203 6553529 -3495508 + ROVER-I_DM LTR Gypsy 5990 6318 -266 6 635 452 269 8 8 chrU 6554635 6554755 -3494282 + BLASTOPIA_I LTR Gypsy 2080 2199 -2282 6 635 570 330 67 24 chrU 6554951 6555292 -3493745 + BLASTOPIA_I LTR Gypsy 2826 3181 -1300 6 635 242 213 0 0 chrU 6555492 6555539 -3493498 - Invader1_LTR LTR Gypsy -272 151 105 6 635 207 200 0 0 chrU 6555596 6555636 -3493401 + A-rich Low_complexity Low_complexity 5 44 0 6 635 1909 191 69 139 chrU 6555672 6556400 -3492637 - Invader1_I LTR Gypsy 0 3186 2510 6 635 2004 84 16 33 chrU 6556401 6556811 -3492226 + STALKER4_LTR LTR Gypsy 1 372 0 6 635 31 58 0 0 chrU 6556900 6556952 -3492085 + AT_rich Low_complexity Low_complexity 1 52 0 6 635 616 201 0 0 chrU 6556953 6557092 -3491945 + STALKER4_I LTR Gypsy 235 373 -6157 6 635 3173 145 3 9 chrU 6557201 6557773 -3491264 + TAHRE LINE telomeric 9884 10452 -11 6 635 21294 87 3 4 chrU 6557771 6560652 -3488385 + TAHRE LINE telomeric 6649 9526 -937 6 635 2521 92 24 21 chrU 6560756 6564198 -3484839 - DMSAT6 Satellite Satellite -61 3453 1 6 635 10751 1 61 0 chrU 6565541 6567170 -3481867 + BARI_DM DNA Tc1 1 1728 0 6 635 1172 276 22 22 chrU 6567244 6567740 -3481297 - FROGGER_I LTR Copia -86 1991 1496 6 635 5864 6 157 0 chrU 6567840 6568669 -3480368 + MDG1_I LTR Gypsy 5652 6800 -97 6 635 423 100 0 0 chrU 6568673 6568743 -3480294 + (TAA)n Simple_repeat Simple_repeat 3 72 0 6 635 2946 20 0 0 chrU 6568743 6569099 -3479938 + MDG1_LTR LTR Gypsy 87 442 0 6 635 655 295 23 28 chrU 6569116 6569523 -3479514 + Gypsy4_I LTR Gypsy 2382 2788 -3072 6 635 661 61 35 0 chrU 6569445 6569559 -3479478 + TLD2 Unknown Unknown 1 118 -100 6 635 1678 107 76 10 chrU 6569559 6569860 -3479177 + MAX_LTR LTR Pao 1 321 0 6 635 2769 79 106 70 chrU 6569860 6570407 -3478630 + MAX_I LTR Pao 1 567 -7347 6 635 5564 100 2 2 chrU 6570411 6571270 -3477767 - S_DM DNA Tc1 0 1736 878 6 635 6696 25 4 0 chrU 6571370 6572205 -3476832 + Gypsy4_I LTR Gypsy 4457 5294 -994 6 635 4335 47 5 0 chrU 6572202 6572758 -3476279 + Gypsy4_I LTR Gypsy 5532 6090 -198 6 635 678 123 145 0 chrU 6572769 6572907 -3476130 + Gypsy4_LTR LTR Gypsy 1 158 -129 6 635 718 211 41 73 chrU 6573093 6573313 -3475724 - DM176_LTR LTR Gypsy -122 385 173 6 635 601 223 98 22 chrU 6573934 6574159 -3474878 + Invader3_LTR LTR Gypsy 1 242 -56 6 635 1107 248 297 11 chrU 6574199 6574775 -3474262 + Invader3_I LTR Gypsy 1 741 -4147 6 635 2555 96 25 22 chrU 6574876 6576243 -3472794 - DMSAT6 Satellite Satellite -254 1369 1 6 635 2313 99 12 61 chrU 6576271 6576765 -3472272 - DMSAT6 Satellite Satellite 0 470 1 6 635 2367 127 11 36 chrU 6576785 6578243 -3470794 - DMSAT6 Satellite Satellite -3 1421 1 6 635 1337 71 0 0 chrU 6580863 6581045 -3467992 - DMTOM1_LTR LTR Gypsy -27 383 202 6 635 1579 216 5 0 chrU 6581090 6581502 -3467535 - DM297_I LTR Gypsy -1413 4754 4341 6 635 203 116 47 0 chrU 6581628 6581671 -3467366 + (CTA)n Simple_repeat Simple_repeat 3 47 0 6 635 376 300 21 27 chrU 6581875 6582120 -3466917 - BURDOCK_I LTR Gypsy -4868 992 850 6 635 47 0 0 0 chrU 6582740 6582787 -3466250 + AT_rich Low_complexity Low_complexity 1 47 0 6 635 1390 88 3 27 chrU 6583297 6583528 -3465509 + STALKER4_LTR LTR Gypsy 209 399 -3 6 635 515 178 47 14 chrU 6583707 6583855 -3465182 + DNAREP1_DM LINE Penelope 1 153 -441 6 635 1439 129 260 13 chrU 6584185 6584562 -3464475 + DNAREP1_DM LINE Penelope 1 470 -124 6 635 22 0 0 0 chrU 6584582 6584604 -3464433 + AT_rich Low_complexity Low_complexity 1 22 0 6 635 559 275 88 0 chrU 6586494 6586800 -3462237 + TOM_I LTR Gypsy 1529 1857 -4255 6 635 1654 205 66 24 chrU 6586898 6587367 -3461670 + DM297_I LTR Gypsy 2486 2974 -3193 6 635 1237 192 81 7 chrU 6587407 6587680 -3461357 + TOM_I LTR Gypsy 3992 4284 -1828 6 635 2288 219 43 10 chrU 6588074 6588753 -3460284 + DM297_I LTR Gypsy 3187 3887 -2280 6 635 3813 214 29 14 chrU 6588853 6592228 -3456809 + SAR_DM Satellite Satellite 1 3425 -208 6 635 8904 117 62 12 chrU 6592343 6593816 -3455221 - Gypsy12_I LTR Gypsy -2807 2739 1193 6 635 12261 107 50 1 chrU 6593825 6595693 -3453344 - Gypsy12_I LTR Gypsy -968 4578 2620 6 635 3277 58 69 0 chrU 6595817 6596296 -3452741 - PROTOP DNA P -3968 512 1 6 635 299 122 80 27 chrU 6596427 6596527 -3452510 - TAHRE LINE telomeric -3988 10489 10417 6 635 715 241 199 40 chrU 6596609 6597016 -3452021 - TAHRE LINE telomeric -188 10275 9871 6 635 6832 210 53 54 chrU 6597011 6599186 -3449851 - Gypsy12_LTR LTR Gypsy -23 2313 142 6 635 15770 15 35 0 chrU 6599288 6602661 -3446376 - Invader2_I LTR Gypsy -664 3928 439 6 635 3556 55 64 0 chrU 6602761 6603491 -3445546 + PROTOP_A DNA P 464 1105 0 6 635 26 30 0 0 chrU 6603868 6603901 -3445136 + AT_rich Low_complexity Low_complexity 1 33 0 6 635 23 68 0 0 chrU 6603947 6603991 -3445046 + AT_rich Low_complexity Low_complexity 1 44 0 6 635 21 89 0 0 chrU 6604029 6604085 -3444952 + AT_rich Low_complexity Low_complexity 1 56 0 6 635 4188 53 46 2 chrU 6604941 6606011 -3443026 + PROTOP DNA P 123 1105 0 6 635 3617 4 148 4 chrU 6606234 6606712 -3442325 - ACCORD_LTR LTR Gypsy -11 547 1 6 635 17453 41 47 5 chrU 6606713 6609035 -3440002 - R1_DM LINE R1 -2936 2420 1 6 635 4216 30 6 13 chrU 6609070 6609605 -3439432 - R1_DM LINE R1 -2 5354 4824 6 635 4150 204 37 23 chrU 6609710 6613070 -3435967 + SAR_DM Satellite Satellite 1 3408 -396 6 635 13167 44 20 2 chrU 6613170 6614853 -3434184 - R1_DM LINE R1 -3100 2256 453 6 635 782 84 9 0 chrU 6614846 6614953 -3434084 - R1_DM LINE R1 -5248 108 1 6 635 3733 28 0 0 chrU 6614986 6615411 -3433626 - R1_DM LINE R1 0 5356 4932 6 635 5178 22 55 1 chrU 6615406 6616524 -3432513 - R1_DM LINE R1 -551 4805 3627 6 635 1782 289 31 38 chrU 6616624 6617734 -3431303 - SAR_DM Satellite Satellite -456 1101 1 6 635 1807 285 45 50 chrU 6617758 6619972 -3429065 - SAR_DM Satellite Satellite -314 2203 1 6 635 1395 26 0 0 chrU 6620107 6620262 -3428775 + R1_DM LINE R1 5202 5356 0 6 635 3571 72 4 4 chrU 6620295 6620758 -3428279 + R1_DM LINE R1 1 463 -4893 6 635 2263 39 67 0 chrU 6620765 6621049 -3427988 - R1_DM LINE R1 -189 5167 4865 6 635 21 0 0 0 chrU 6621216 6621237 -3427800 + AT_rich Low_complexity Low_complexity 1 21 0 6 635 2227 22 4 25 chrU 6622525 6622803 -3426234 + BATUMI_LTR LTR Pao 1 272 0 6 635 4730 35 20 11 chrU 6622803 6623416 -3425621 + BATUMI_I LTR Pao 1 618 -7345 6 635 4803 2 0 15 chrU 6623519 6624064 -3424973 + LINEJ1_DM LINE Jockey 4484 5020 0 6 635 502 125 102 0 chrU 6624065 6624153 -3424884 - DNAREP1_DM LINE Penelope -2 592 496 6 635 313 138 0 49 chrU 6624298 6624359 -3424678 + G5A_DM LINE Jockey 2735 2792 -49 6 635 1100 141 16 5 chrU 6625105 6625291 -3423746 + DNAREP1_DM LINE Penelope 49 236 -358 6 635 212 0 0 35 chrU 6625342 6625371 -3423666 + (TAA)n Simple_repeat Simple_repeat 2 29 0 6 635 23 54 0 0 chrU 6626506 6626543 -3422494 + AT_rich Low_complexity Low_complexity 1 37 0 6 635 544 111 100 0 chrU 6626602 6626692 -3422345 - DNAREP1_DM LINE Penelope 0 594 496 6 635 5703 19 1 3 chrU 6626960 6627659 -3421378 + IDEFIX_I LTR Gypsy 4931 5628 0 6 635 4931 32 2 2 chrU 6627659 6628253 -3420784 + IDEFIX_LTR LTR Gypsy 1 594 0 6 635 5912 6 1 5 chrU 6628270 6628930 -3420107 + QUASIMODO_LTR LTR Gypsy 1 658 0 6 635 620 70 0 0 chrU 6628940 6629026 -3420011 - S_DM DNA Tc1 0 1736 1651 6 635 11651 2 0 0 chrU 6629024 6630285 -3418752 - DOC LINE Jockey -5 4720 3460 6 635 182 59 88 0 chrU 6630385 6630419 -3418618 + (CTATT)n Simple_repeat Simple_repeat 1 37 0 6 635 1207 80 17 6 chrU 6630432 6630783 -3418254 + (CTATT)n Simple_repeat Simple_repeat 1 355 0 6 635 1169 101 10 0 chrU 6630796 6631094 -3417943 + (CTATT)n Simple_repeat Simple_repeat 1 301 0 6 635 1313 71 3 22 chrU 6631107 6631469 -3417568 + (CTATT)n Simple_repeat Simple_repeat 1 355 0 6 635 621 164 11 11 chrU 6631494 6631673 -3417364 + (CTATT)n Simple_repeat Simple_repeat 2 180 0 6 635 1437 39 0 0 chrU 6631687 6631867 -3417170 + (CTATT)n Simple_repeat Simple_repeat 1 180 0 6 635 1479 76 3 8 chrU 6631896 6632775 -3416262 + (CTATT)n Simple_repeat Simple_repeat 1 875 0 6 635 1183 67 6 6 chrU 6632793 6632973 -3416064 + (CTATT)n Simple_repeat Simple_repeat 1 180 0 6 635 288 197 15 0 chrU 6632974 6633040 -3415997 + (TTATA)n Simple_repeat Simple_repeat 3 69 0 6 635 1196 104 14 18 chrU 6633040 6633698 -3415339 + (CTATT)n Simple_repeat Simple_repeat 1 654 0 6 635 3656 19 12 2 chrU 6633798 6634224 -3414813 + LSU-rRNA_Dme rRNA rRNA 1362 1791 -2109 6 635 7167 16 0 0 chrU 6634265 6635059 -3413978 + LSU-rRNA_Dme rRNA rRNA 1788 2581 -1319 6 635 1816 19 0 5 chrU 6635080 6635286 -3413751 + R2_DM LINE R2 3 207 -3400 6 635 15565 31 29 5 chrU 6635284 6637106 -3411931 + R2_DM LINE R2 409 2274 -1333 6 635 2664 109 14 38 chrU 6637206 6640508 -3408529 - DMSAT6 Satellite Satellite -38 3224 1 6 635 7100 59 54 0 chrU 6640608 6641528 -3407509 + DMCR1A LINE CR1 1472 2441 -2029 6 635 1509 68 73 0 chrU 6641540 6641746 -3407291 + DMCR1A LINE CR1 3104 3324 -1146 6 635 5313 61 64 3 chrU 6641732 6642440 -3406597 + DMCR1A LINE CR1 3657 4407 -63 6 635 2753 123 141 29 chrU 6642458 6643226 -3405811 - ACCORD2_I LTR Gypsy -6248 964 1 6 635 244 91 0 0 chrU 6643226 6643259 -3405778 - ACCORD2_LTR LTR Gypsy 0 215 183 6 635 674 312 17 61 chrU 6643591 6643888 -3405149 - Gypsy8_I LTR Gypsy -1905 2442 2159 6 635 10962 32 0 0 chrU 6644007 6645265 -3403772 - R1_DM LINE R1 -2771 2585 1328 6 635 911 53 9 9 chrU 6645262 6645376 -3403661 - R1_DM LINE R1 -4179 1177 1064 6 635 2052 24 0 12 chrU 6645396 6645647 -3403390 - R1_DM LINE R1 -4279 1077 830 6 635 4749 55 20 5 chrU 6645632 6646235 -3402802 - R1_DM LINE R1 -4744 612 1 6 635 991 44 0 0 chrU 6646268 6646382 -3402655 - R1_DM LINE R1 0 5356 5243 6 635 8009 26 5 0 chrU 6646379 6647297 -3401740 - R1_DM LINE R1 -290 5066 4144 6 635 1168 180 31 42 chrU 6647590 6647911 -3401126 - DMRT1B LINE R1 -4850 333 1 6 635 2932 141 33 56 chrU 6647957 6648564 -3400473 - IDEFIX_LTR LTR Gypsy -1 593 1 6 635 281 189 271 9 chrU 6648564 6648671 -3400366 - IDEFIX_I LTR Gypsy 0 5628 5494 6 635 228 242 0 31 chrU 6648640 6648704 -3400333 - Bilbo LINE LOA -4981 549 488 6 635 817 281 37 39 chrU 6648801 6649156 -3399881 + G2_DM LINE Jockey 1796 2149 -953 6 635 314 302 60 60 chrU 6649301 6649655 -3399382 + G3_DM LINE Jockey 3890 4298 -394 6 635 7940 35 1 6 chrU 6649742 6650681 -3398356 + DMCR1A LINE CR1 1 934 -3536 6 635 1751 81 124 3 chrU 6650781 6651079 -3397958 + DMSAT6 Satellite Satellite 73 406 -64 6 635 2617 97 11 49 chrU 6651090 6652152 -3396885 + DMSAT6 Satellite Satellite 1 1021 -3 6 635 2776 99 24 17 chrU 6652184 6654058 -3394979 + DMSAT6 Satellite Satellite 1 1886 0 6 635 7377 25 54 0 chrU 6654178 6655154 -3393883 + DM1731_I LTR Copia 6 1034 -2942 6 635 1349 20 0 0 chrU 6655151 6655300 -3393737 - R1_DM LINE R1 0 5356 5208 6 635 16055 48 7 4 chrU 6655300 6657433 -3391604 - R1_DM LINE R1 -292 5064 1916 6 635 248 258 57 39 chrU 6657990 6658103 -3390934 + BLASTOPIA_I LTR Gypsy 3590 3691 -790 6 635 450 122 0 13 chrU 6658677 6658752 -3390285 + DIVER_LTR LTR Pao 151 224 0 6 635 6903 28 40 0 chrU 6658773 6659624 -3389413 + PROTOP_A DNA P 221 1105 0 6 635 9188 63 48 0 chrU 6659624 6660801 -3388236 + Baggins1 LINE LOA 4168 5400 -53 6 635 1443 34 0 0 chrU 6660901 6661078 -3387959 + (CAAGA)n Simple_repeat Simple_repeat 1 177 0 6 635 993 106 0 0 chrU 6661080 6661260 -3387777 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 6 635 1533 10 0 0 chrU 6661260 6661548 -3387489 + (CAAGA)n Simple_repeat Simple_repeat 1 288 0 6 635 5137 28 28 5 chrU 6661548 6662442 -3386595 - PROTOP_A DNA P -87 1018 1 6 635 3589 47 4 47 chrU 6662442 6663313 -3385724 - CIRCE LINE Composite -593 5763 4981 6 635 633 40 0 0 chrU 6663635 6663710 -3385327 - CIRCE LINE Composite -1376 4980 4906 6 635 3500 29 20 13 chrU 6663711 6664163 -3384874 - CIRCE LINE Composite -1656 4700 4246 6 635 3520 207 60 4 chrU 6664265 6665066 -3383971 - ROVER-I_DM LTR Gypsy -2497 4087 3242 6 635 1813 38 4 44 chrU 6665083 6665334 -3383703 + BATUMI_LTR LTR Pao 32 272 0 6 635 15001 39 20 71 chrU 6665334 6667518 -3381519 + BATUMI_I LTR Pao 1 2073 -5890 6 635 2509 46 3 0 chrU 6667624 6667930 -3381107 + TART LINE telomeric 6180 6486 -7991 6 635 2636 90 127 24 chrU 6667923 6668380 -3380657 + TART LINE telomeric 6984 7487 -6990 6 635 1930 51 19 0 chrU 6668398 6668655 -3380382 + TART LINE telomeric 7768 8029 -6448 6 635 6804 47 7 1 chrU 6668655 6669553 -3379484 - QUASIMODO_I LTR Gypsy -2072 3988 3086 6 635 5363 78 72 18 chrU 6669546 6670361 -3378676 + TART LINE telomeric 6629 7487 -6990 6 635 210 91 0 0 chrU 6670379 6670412 -3378625 + (TAAAG)n Simple_repeat Simple_repeat 3 35 0 6 635 1797 43 21 0 chrU 6670412 6670646 -3378391 + TART LINE telomeric 7791 8029 -6448 6 635 1737 63 4 0 chrU 6670646 6670883 -3378154 - QUASIMODO_I LTR Gypsy -2072 3988 3751 6 635 9518 5 0 3 chrU 6670983 6672051 -3376986 + G2_DM LINE Jockey 1345 2409 -693 6 635 4199 45 25 0 chrU 6672088 6672619 -3376418 - G2_DM LINE Jockey -31 3071 2528 6 635 1159 39 0 0 chrU 6672622 6672775 -3376262 + G2_DM LINE Jockey 2940 3092 -10 6 635 6117 98 12 6 chrU 6672775 6673868 -3375169 - G2_DM LINE Jockey -951 2151 1411 6 635 22 56 0 0 chrU 6674008 6674044 -3374993 + AT_rich Low_complexity Low_complexity 1 36 0 6 635 257 33 0 0 chrU 6674072 6674102 -3374935 - NTS_DM Other Other -209 31 2 6 635 1624 119 125 3 chrU 6674342 6674629 -3374408 - Invader1_I LTR Gypsy -147 3039 2718 6 635 269 313 29 44 chrU 6674986 6675190 -3373847 - Invader6_I LTR Gypsy -496 3980 3780 6 635 268 278 19 19 chrU 6675200 6675332 -3373705 - Invader6_I LTR Gypsy -871 3228 3163 6 635 2280 324 61 22 chrU 6675327 6676664 -3372373 - Invader6_I LTR Gypsy -1745 2354 967 6 635 281 271 55 47 chrU 6676755 6676883 -3372154 - MICROPIA_I LTR Gypsy -4347 129 1 6 635 1134 152 106 35 chrU 6676883 6677222 -3371815 - Invader1_LTR LTR Gypsy 0 423 1 6 635 21 0 0 0 chrU 6677222 6677243 -3371794 + AT_rich Low_complexity Low_complexity 1 21 0 6 635 261 122 0 0 chrU 6677321 6677362 -3371675 - BARI1 DNA Tc1 -1707 43 3 6 635 2224 30 4 0 chrU 6677330 6677601 -3371436 + IDEFIX_LTR LTR Gypsy 1 272 -322 6 635 4528 301 37 40 chrU 6677702 6684255 -3364782 + SAR_DM Satellite Satellite 1 6529 -217 6 635 513 257 35 31 chrU 6684045 6684302 -3364735 - XDMR_DM Unknown Unknown -9 351 94 6 79 9906 44 45 2 chrU 6684407 6685667 -3363370 + IDEFIX_I LTR Gypsy 1284 2598 -3030 6 636 2568 82 115 57 chrU 6685666 6686300 -3362737 + IDEFIX_I LTR Gypsy 2704 3374 -2254 6 636 2682 7 0 0 chrU 6686300 6686598 -3362439 - Invader3_LTR LTR Gypsy 0 298 1 6 636 4820 7 21 0 chrU 6686598 6687178 -3361859 - Invader3_I LTR Gypsy 0 4888 4297 6 636 4155 0 28 0 chrU 6687173 6687642 -3361395 - Invader3_I LTR Gypsy -839 4049 3568 6 636 208 200 31 0 chrU 6688243 6688308 -3360729 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 636 22 35 0 0 chrU 6688502 6688531 -3360506 + AT_rich Low_complexity Low_complexity 1 29 0 6 636 224 185 31 0 chrU 6688772 6688837 -3360200 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 636 51 31 0 0 chrU 6689332 6689397 -3359640 + AT_rich Low_complexity Low_complexity 1 65 0 6 636 22 35 0 0 chrU 6689572 6689601 -3359436 + AT_rich Low_complexity Low_complexity 1 29 0 6 636 220 141 46 15 chrU 6689887 6689952 -3359085 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 636 208 200 31 0 chrU 6690428 6690493 -3358544 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 636 21 36 0 0 chrU 6690687 6690715 -3358322 + AT_rich Low_complexity Low_complexity 1 28 0 6 636 7110 185 15 45 chrU 6691089 6692940 -3356097 + HETA LINE telomeric 2861 4464 -1617 6 636 224 185 31 0 chrU 6693456 6693521 -3355516 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 636 25 31 0 0 chrU 6693744 6693776 -3355261 + AT_rich Low_complexity Low_complexity 1 32 0 6 636 208 200 31 0 chrU 6693970 6694035 -3355002 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 636 402 92 126 0 chrU 6694218 6694305 -3354732 + HETA LINE telomeric 9527 9624 -4853 6 636 266 284 49 49 chrU 6696934 6697097 -3351940 + ZAM_I LTR Gypsy 3535 3697 -3793 6 636 11383 76 39 16 chrU 6697739 6699584 -3349453 + STALKER4_I LTR Gypsy 291 2225 -4305 6 636 3616 0 0 2 chrU 6699587 6699990 -3349047 + STALKER4_LTR LTR Gypsy 1 402 0 6 636 556 0 0 67 chrU 6699990 6700065 -3348972 + STALKER4_I LTR Gypsy 1 70 -6460 6 636 3060 17 0 3 chrU 6700065 6700422 -3348615 - MDG1_LTR LTR Gypsy 0 442 87 6 636 423 100 0 0 chrU 6700422 6700492 -3348545 + (TTA)n Simple_repeat Simple_repeat 3 72 0 6 636 3160 6 64 5 chrU 6700496 6700955 -3348082 - MDG1_I LTR Gypsy -98 6799 6123 6 636 1404 107 71 158 chrU 6701098 6701416 -3347621 + HOBO DNA hAT 23 312 -2704 6 636 1440 35 6 0 chrU 6701416 6701589 -3347448 + PROTOP_A DNA P 1 174 -931 6 636 1463 29 6 0 chrU 6701589 6701762 -3347275 + PROTOP_A DNA P 1 174 -931 6 636 8838 20 15 42 chrU 6701762 6702898 -3346139 + PROTOP_A DNA P 1 1105 0 6 636 27 29 0 0 chrU 6703149 6703183 -3345854 + AT_rich Low_complexity Low_complexity 1 34 0 6 636 23694 6 1 0 chrU 6704378 6707088 -3341949 + ZAM_I LTR Gypsy 2390 5103 -2387 6 636 555 134 62 13 chrU 6707142 6707285 -3341752 + TART LINE telomeric 10370 10491 -3986 6 636 1151 52 78 104 chrU 6707403 6707596 -3341441 + PROTOP_B DNA P 1 188 -965 6 636 4201 0 0 0 chrU 6707696 6708152 -3340885 - TABOR_LTR LTR Gypsy -50 456 1 6 636 22 56 0 0 chrU 6708350 6708386 -3340651 + AT_rich Low_complexity Low_complexity 1 36 0 6 636 402 183 75 19 chrU 6708432 6708538 -3340499 + Copia_I LTR Copia 4402 4513 -80 6 636 28 0 0 0 chrU 6709274 6709302 -3339735 + AT_rich Low_complexity Low_complexity 1 28 0 6 636 4255 173 193 33 chrU 6709326 6710688 -3338349 - TART LINE telomeric -3986 10491 8519 6 636 1301 53 0 0 chrU 6710739 6710909 -3338128 - PROTOP_A DNA P -745 360 191 6 636 2536 89 7 44 chrU 6711009 6714214 -3334823 + DMSAT6 Satellite Satellite 1 3088 -64 6 636 4422 191 53 30 chrU 6714318 6715455 -3333582 + SAR_DM Satellite Satellite 1 1162 -203 6 636 3100 17 0 0 chrU 6715460 6715816 -3333221 - MDG1_LTR LTR Gypsy 0 442 87 6 636 354 100 0 0 chrU 6715816 6715876 -3333161 + (TTA)n Simple_repeat Simple_repeat 1 60 0 6 636 14442 7 0 0 chrU 6715877 6717522 -3331515 - MDG1_I LTR Gypsy -2465 4131 2487 6 636 8874 191 24 4 chrU 6717624 6719281 -3329756 - HMSBEAGLE_I LTR Gypsy -2755 3774 2085 6 636 807 166 68 106 chrU 6719301 6719537 -3329500 - DMLTR5 LTR Gypsy 0 266 40 6 636 2843 303 28 12 chrU 6719665 6720826 -3328211 + MICROPIA_I LTR Gypsy 2363 3541 -935 6 636 1262 45 0 0 chrU 6720927 6721083 -3327954 - IDEFIX_I LTR Gypsy -5472 156 1 6 636 4323 30 62 11 chrU 6721546 6722111 -3326926 - IDEFIX_LTR LTR Gypsy 0 594 1 6 636 7806 39 83 1 chrU 6722111 6723146 -3325891 - IDEFIX_I LTR Gypsy 0 5628 4509 6 636 7739 46 6 5 chrU 6723136 6724128 -3324909 - IDEFIX_I LTR Gypsy -1346 4282 3290 6 636 1274 50 0 0 chrU 6724228 6724388 -3324649 - ARS406_DM Unknown Unknown -193 160 1 6 636 4344 214 19 24 chrU 6724292 6726552 -3322485 + SAR_DM Satellite Satellite 1 2248 -216 6 636 1313 49 0 0 chrU 6726555 6726719 -3322318 - ARS406_DM Unknown Unknown -189 164 1 6 636 3667 193 6 9 chrU 6726623 6727428 -3321609 + SAR_DM Satellite Satellite 192 994 -478 6 636 9805 4 0 3 chrU 6727529 6728609 -3320428 + DOC LINE Jockey 3649 4725 0 6 636 2120 25 0 8 chrU 6728614 6728861 -3320176 + CIRCE LINE Composite 3480 3724 -2632 6 636 4809 28 0 19 chrU 6728857 6729445 -3319592 + CIRCE LINE Composite 4391 4967 -1389 6 636 5665 58 27 119 chrU 6729801 6730726 -3318311 + CIRCE LINE Composite 4981 5820 -536 6 636 4626 19 123 0 chrU 6730826 6731144 -3317893 + TART LINE telomeric 7398 7722 -6755 6 636 516 68 0 0 chrU 6731144 6731217 -3317820 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 6 636 4626 19 123 0 chrU 6731217 6731461 -3317576 + TART LINE telomeric 7723 8027 -6450 6 636 14957 96 13 5 chrU 6731464 6734022 -3315015 + TART_B1 LINE telomeric 879 3666 -6988 6 636 14298 85 157 5 chrU 6734123 6736385 -3312652 + TART_B1 LINE telomeric 1032 3638 -7016 6 636 6268 131 1 1 chrU 6736385 6737317 -3311720 + TART_B1 LINE telomeric 4264 5195 -5459 6 636 11216 57 40 9 chrU 6737417 6738882 -3310155 + DMCR1A LINE CR1 2891 4401 -69 6 636 1853 68 109 0 chrU 6739285 6739605 -3309432 + DOC5_DM LINE Jockey 1 355 -4327 6 636 664 110 15 23 chrU 6739604 6739734 -3309303 + DOC5_DM LINE Jockey 588 716 -3966 6 636 2308 63 136 5 chrU 6739726 6740611 -3308426 + DOC5_DM LINE Jockey 1419 2419 -2263 6 636 9785 25 41 39 chrU 6740711 6741980 -3307057 + Gypsy12_LTR LTR Gypsy 1065 2336 0 6 636 3735 69 0 0 chrU 6741980 6742472 -3306565 - IDEFIX_I LTR Gypsy -1414 4214 3723 6 636 16288 7 14 4 chrU 6744001 6746215 -3302822 - FW_DM LINE Jockey -2411 2281 1 6 636 859 104 12 18 chrU 6746223 6746883 -3302154 - RSP Satellite Satellite -18 656 1 6 636 7210 24 1 1 chrU 6747284 6748126 -3300911 - R1_DM LINE R1 -1240 4116 3275 6 636 8423 31 43 1 chrU 6748129 6750085 -3298952 - R1_DM LINE R1 -2214 3142 1103 6 636 2923 59 3 5 chrU 6750085 6750461 -3298576 - R1_DM LINE R1 -4745 611 237 6 636 3949 7 0 0 chrU 6750561 6751001 -3298036 + FW_DM LINE Jockey 4253 4692 0 6 636 1459 163 52 28 chrU 6751026 6751316 -3297721 - Gypsy12_LTR LTR Gypsy -2039 297 1 6 636 10333 89 0 7 chrU 6751315 6752665 -3296372 - Gypsy12_I LTR Gypsy 0 5546 4206 6 636 7850 98 0 15 chrU 6752663 6753738 -3295299 - Gypsy12_I LTR Gypsy -1672 3874 2816 6 636 21 57 0 0 chrU 6753974 6754009 -3295028 + AT_rich Low_complexity Low_complexity 1 35 0 6 636 3781 66 43 2 chrU 6755687 6756286 -3292751 + PROTOP_A DNA P 570 1105 0 6 636 33 0 0 0 chrU 6756664 6756697 -3292340 + AT_rich Low_complexity Low_complexity 1 33 0 6 636 26 30 0 0 chrU 6756761 6756794 -3292243 + AT_rich Low_complexity Low_complexity 1 33 0 6 636 21 89 0 0 chrU 6756832 6756888 -3292149 + AT_rich Low_complexity Low_complexity 1 56 0 6 636 4327 209 30 19 chrU 6757114 6760237 -3288800 + SAR_DM Satellite Satellite 1 3158 -203 6 636 913 128 7 13 chrU 6760136 6760287 -3288750 - ARS406_DM Unknown Unknown -166 187 38 6 636 11076 6 15 5 chrU 6760388 6761631 -3287406 + DOC LINE Jockey 3464 4719 -6 6 636 36 0 0 0 chrU 6761801 6761837 -3287200 + AT_rich Low_complexity Low_complexity 1 36 0 6 636 225 0 0 91 chrU 6762208 6762252 -3286785 + (CAA)n Simple_repeat Simple_repeat 2 41 0 6 636 910 102 95 0 chrU 6763661 6763808 -3285229 - MDG1_I LTR Gypsy -1133 5463 5303 6 636 2943 70 0 5 chrU 6763795 6764183 -3284854 + BATUMI_I LTR Pao 7578 7963 0 6 636 484 71 204 0 chrU 6764189 6764287 -3284750 + BATUMI_I LTR Pao 7007 7124 -839 6 636 4606 107 156 52 chrU 6764301 6765283 -3283754 - CIRCE LINE Composite -1759 4597 3514 6 636 6641 42 15 16 chrU 6765280 6766118 -3282919 + G5A_DM LINE Jockey 2019 2836 -5 6 636 5019 71 6 0 chrU 6766132 6766832 -3282205 - IDEFIX_I LTR Gypsy -144 5484 4781 6 636 3346 0 0 0 chrU 6766932 6767299 -3281738 + FW_DM LINE Jockey 4326 4692 0 6 636 2998 263 70 23 chrU 6767317 6768792 -3280245 - Stalker2_I LTR Gypsy -3739 3663 1802 6 636 35 41 0 0 chrU 6768882 6768931 -3280106 + AT_rich Low_complexity Low_complexity 1 49 0 6 636 272 325 19 98 chrU 6768946 6769202 -3279835 - ACCORD2_I LTR Gypsy -6451 761 526 6 636 332 326 52 69 chrU 6769766 6770072 -3278965 - MICROPIA_I LTR Gypsy -514 3962 3662 6 636 3003 50 58 75 chrU 6770194 6770687 -3278350 + DM176_LTR LTR Gypsy 10 480 -27 6 636 595 74 0 0 chrU 6770687 6770768 -3278269 + DM176_I LTR Gypsy 1 81 -6339 6 636 2153 12 0 15 chrU 6770747 6771010 -3278027 - DOC LINE Jockey -1 4724 4466 6 636 5997 3 0 0 chrU 6771007 6771657 -3277380 - DOC LINE Jockey -933 3792 3143 6 636 3554 24 5 2 chrU 6772282 6772694 -3276343 - DOC LINE Jockey -2392 2333 1921 6 636 3587 47 31 26 chrU 6772693 6773352 -3275685 + DM176_I LTR Gypsy 53 673 -5747 6 636 2509 105 24 24 chrU 6773488 6776610 -3272427 - DMSAT6 Satellite Satellite -1 3122 1 6 636 2597 117 16 40 chrU 6776713 6778382 -3270655 - DMSAT6 Satellite Satellite -3 1629 1 6 636 2461 119 19 33 chrU 6778397 6779866 -3269171 - DMSAT6 Satellite Satellite -38 1449 1 6 636 852 20 0 0 chrU 6779966 6780066 -3268971 - NINJA_I LTR Pao -3410 2601 2502 6 636 16810 89 27 11 chrU 6780063 6782420 -3266617 - NINJA_I LTR Pao -3616 2395 1 6 636 2248 46 45 23 chrU 6782421 6782730 -3266307 - NINJA_LTR LTR Pao -1 316 1 6 636 3660 226 45 28 chrU 6783220 6786361 -3262676 - SAR_DM Satellite Satellite -847 3193 1 6 636 19500 104 10 53 chrU 6786482 6789593 -3259444 - HETA LINE telomeric -2163 3918 944 6 636 4323 200 41 30 chrU 6789707 6792786 -3256251 - SAR_DM Satellite Satellite -291 3114 1 6 636 839 103 0 0 chrU 6792690 6792816 -3256221 + ARS406_DM Unknown Unknown 1 126 -227 6 636 40 0 0 0 chrU 6793504 6793544 -3255493 + AT_rich Low_complexity Low_complexity 1 40 0 6 636 4482 110 72 37 chrU 6793729 6794552 -3254485 - ACCORD2_I LTR Gypsy -6151 1061 180 6 636 2402 141 26 21 chrU 6794552 6794973 -3254064 + Invader1_LTR LTR Gypsy 1 423 0 6 636 383 281 60 35 chrU 6794973 6795172 -3253865 + MICROPIA_I LTR Gypsy 1 204 -4272 6 636 422 319 81 60 chrU 6795379 6796033 -3253004 + MICROPIA_I LTR Gypsy 772 1439 -3037 6 636 3422 48 1 14 chrU 6796175 6796614 -3252423 - STALKER4_LTR LTR Gypsy -3 399 1 6 636 22 22 0 62 chrU 6797796 6797844 -3251193 + AT_rich Low_complexity Low_complexity 1 45 0 6 636 35 71 0 0 chrU 6798269 6798339 -3250698 + AT_rich Low_complexity Low_complexity 1 70 0 6 636 672 249 296 12 chrU 6798879 6799259 -3249778 + MDG1_I LTR Gypsy 5125 5586 -1010 6 636 1851 78 86 0 chrU 6799359 6799615 -3249422 - MDG1_LTR LTR Gypsy -71 371 94 6 636 339 105 0 0 chrU 6799617 6799674 -3249363 + (TTA)n Simple_repeat Simple_repeat 3 59 0 6 636 226 93 0 122 chrU 6799690 6799739 -3249298 - HETA LINE telomeric -4591 1490 1448 6 636 1471 174 20 71 chrU 6799730 6800182 -3248855 - TAHRE LINE telomeric -10034 429 1 6 636 4494 87 194 41 chrU 6800217 6800985 -3248052 - HETA LINE telomeric -3 6078 5210 6 636 1886 103 222 0 chrU 6800982 6801311 -3247726 - TART LINE telomeric -6506 7971 7570 6 636 1756 122 111 141 chrU 6801305 6801772 -3247265 - TART LINE telomeric -7040 7437 6985 6 636 1775 192 172 71 chrU 6801762 6802459 -3246578 - TART LINE telomeric -3805 10672 9906 6 636 1717 0 126 0 chrU 6802561 6802767 -3246270 - Copia_I LTR Copia -4361 232 1 6 636 2405 7 0 0 chrU 6802767 6803043 -3245994 - Copia_LTR LTR Copia 0 276 1 6 636 24 0 0 0 chrU 6803327 6803351 -3245686 + AT_rich Low_complexity Low_complexity 1 24 0 6 636 261 159 73 73 chrU 6803702 6803770 -3245267 - Gypsy4_I LTR Gypsy -1897 4391 4324 6 636 235 299 49 49 chrU 6803917 6804079 -3244958 - GTWIN_I LTR Gypsy -2137 4284 4123 6 636 665 342 16 16 chrU 6804594 6805181 -3243856 - GTWIN_I LTR Gypsy -3056 3956 3254 6 636 4257 0 0 0 chrU 6805179 6805661 -3243376 - Copia_I LTR Copia -1560 3033 2552 6 636 26821 26 8 1 chrU 6805763 6808861 -3240176 + R1_DM LINE R1 849 3970 -1386 6 636 23950 0 0 0 chrU 6808961 6811590 -3237447 + DOC6_DM LINE Jockey 1590 4218 -4 6 636 180 0 0 0 chrU 6811590 6811610 -3237427 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 6 636 51 31 0 0 chrU 6811724 6811789 -3237248 + AT_rich Low_complexity Low_complexity 1 65 0 6 636 22 35 0 0 chrU 6811965 6811994 -3237043 + AT_rich Low_complexity Low_complexity 1 29 0 6 636 4639 44 14 0 chrU 6812150 6812739 -3236298 - MDG1_I LTR Gypsy -1454 5142 4546 6 636 5291 35 0 0 chrU 6812727 6813356 -3235681 - MDG1_I LTR Gypsy -3972 2624 1996 6 636 263 49 0 24 chrU 6813359 6813401 -3235636 + (TTATA)n Simple_repeat Simple_repeat 4 44 0 6 636 2308 57 13 0 chrU 6813401 6813715 -3235322 - MDG1_I LTR Gypsy -5149 1447 1130 6 636 7747 81 28 11 chrU 6813789 6814927 -3234110 - MDG1_I LTR Gypsy -5367 1229 73 6 636 1653 84 4 4 chrU 6815008 6815235 -3233802 - MDG1_LTR LTR Gypsy -29 413 187 6 636 420 169 0 0 chrU 6815335 6815412 -3233625 + GA-rich Low_complexity Low_complexity 6 82 0 6 636 615 251 50 18 chrU 6815412 6815631 -3233406 + Gypsy5_I LTR Gypsy 4612 4837 -1672 6 79 2098 252 19 9 chrU 6815651 6816184 -3232853 + Gypsy5_I LTR Gypsy 4897 5434 -1075 6 637 3884 20 0 65 chrU 6816190 6816680 -3232357 - MICROPIA_LTR LTR Gypsy 0 476 19 6 637 8124 184 27 50 chrU 6816676 6818400 -3230637 + ROVER-I_DM LTR Gypsy 4298 5981 -603 6 637 3296 158 75 2 chrU 6818515 6819091 -3229946 + Gypsy5_I LTR Gypsy 3386 4003 -2506 6 637 2312 163 0 0 chrU 6819100 6819474 -3229563 + Gypsy5_I LTR Gypsy 390 763 -5746 6 637 3191 183 0 5 chrU 6819480 6820057 -3228980 + Gypsy5_I LTR Gypsy 944 1517 -4992 6 637 7357 169 11 0 chrU 6820330 6821595 -3227442 + Gypsy5_I LTR Gypsy 1691 2969 -3540 6 637 950 156 17 121 chrU 6821944 6822184 -3226853 + ACCORD2_LTR LTR Gypsy 1 215 0 6 637 944 64 220 56 chrU 6822184 6822401 -3226636 + ACCORD2_I LTR Gypsy 1 356 -6856 6 637 939 160 48 32 chrU 6822402 6822589 -3226448 + ACCORD2_LTR LTR Gypsy 26 215 0 6 637 4316 68 56 0 chrU 6822789 6823377 -3225660 + PROTOP DNA P 2614 3234 -1246 6 637 221 208 38 0 chrU 6823982 6824035 -3225002 + (CATA)n Simple_repeat Simple_repeat 1 55 0 6 637 5242 7 0 3 chrU 6824872 6825447 -3223590 + R2_DM LINE R2 3028 3600 -7 6 637 2202 8 0 0 chrU 6825443 6825681 -3223356 + LSU-rRNA_Dme rRNA rRNA 2578 2815 -1085 6 637 18442 30 48 21 chrU 6825678 6827946 -3221091 + R1_DM LINE R1 1274 3601 -1755 6 637 2685 99 30 40 chrU 6828048 6830105 -3218932 + DMSAT6 Satellite Satellite 1 2037 -85 6 637 2645 94 37 21 chrU 6830124 6831121 -3217916 + DMSAT6 Satellite Satellite 1 1012 -97 6 637 4071 28 4 2 chrU 6831221 6831689 -3217348 + Gypsy_LTR LTR Gypsy 14 482 0 6 637 789 61 0 0 chrU 6831689 6831788 -3217249 + Invader4_LTR LTR Gypsy 194 292 -54 6 637 342 248 33 72 chrU 6831949 6832173 -3216864 + TIRANT_I LTR Gypsy 6079 6465 -1227 6 637 900 170 38 6 chrU 6832274 6832434 -3216603 + Gypsy_LTR LTR Gypsy 6 170 -312 6 637 438 198 0 40 chrU 6832432 6832532 -3216505 + Gypsy_LTR LTR Gypsy 350 445 -37 6 637 1310 112 0 30 chrU 6832537 6832778 -3216259 + Stalker2_LTR LTR Gypsy 3 232 -192 6 637 4594 6 0 0 chrU 6832778 6833273 -3215764 + GTWIN_LTR LTR Gypsy 1 495 0 6 637 9534 3 0 1 chrU 6833273 6834294 -3214743 + GTWIN_I LTR Gypsy 1 1020 -5401 6 637 22307 42 1 19 chrU 6834394 6837127 -3211910 - R1_DM LINE R1 -2672 2684 1 6 637 2468 37 40 7 chrU 6837160 6837459 -3211578 - R1_DM LINE R1 0 5356 5048 6 637 22523 28 30 0 chrU 6837559 6840618 -3208419 + R1_DM LINE R1 1657 4807 -549 6 637 14812 6 13 0 chrU 6840719 6842344 -3206693 + DMRT1A LINE R1 3532 5177 -6 6 637 852 131 191 0 chrU 6842343 6842511 -3206526 + TART_B1 LINE telomeric 2381 2580 -8074 6 637 4237 55 69 0 chrU 6842509 6843057 -3205980 + TART_B1 LINE telomeric 2940 3525 -7129 6 637 4994 114 36 0 chrU 6843051 6843776 -3205261 + TART_B1 LINE telomeric 4319 5069 -5585 6 637 7275 90 0 0 chrU 6843876 6844814 -3204223 + Gypsy12_I LTR Gypsy 2833 3770 -1776 6 637 10988 96 44 7 chrU 6844838 6846349 -3202688 + Gypsy12_I LTR Gypsy 3976 5543 -3 6 637 2412 195 20 46 chrU 6846368 6846910 -3202127 + Gypsy12_LTR LTR Gypsy 1 528 -1808 6 637 2468 98 6 36 chrU 6847024 6848142 -3200895 + DMSAT6 Satellite Satellite 1 1084 -62 6 637 2540 102 10 55 chrU 6848169 6850058 -3198979 + DMSAT6 Satellite Satellite 1 1804 0 6 637 1001 317 37 5 chrU 6850166 6850572 -3198465 - ZAM_I LTR Gypsy -5604 1886 1468 6 637 25 0 0 0 chrU 6850774 6850799 -3198238 + AT_rich Low_complexity Low_complexity 1 25 0 6 637 624 179 33 25 chrU 6852013 6852133 -3196904 + DMRT1C LINE R1 23 143 -5300 6 637 3190 104 118 1 chrU 6852564 6853209 -3195828 + S_DM DNA Tc1 358 1077 -659 6 637 3447 220 55 23 chrU 6853317 6854668 -3194369 + SAR_DM Satellite Satellite 1 1393 -203 6 637 371 324 57 9 chrU 6854608 6854714 -3194323 - ARS406_DM Unknown Unknown -166 187 77 6 637 3707 220 30 30 chrU 6854692 6856334 -3192703 + SAR_DM Satellite Satellite 1 1641 -203 6 637 18173 8 15 0 chrU 6856434 6858548 -3190489 + BLOOD_I LTR Gypsy 4396 6612 -1 6 637 2028 43 8 45 chrU 6858551 6858819 -3190218 + BLOOD_LTR LTR Gypsy 1 258 -141 6 637 4556 27 0 0 chrU 6858935 6859458 -3189579 - R1_DM LINE R1 -2094 3262 2740 6 637 1013 73 10 18 chrU 6859558 6862508 -3186529 + RSP Satellite Satellite 1 2927 0 6 637 2649 89 14 56 chrU 6862671 6865054 -3183983 - DMSAT6 Satellite Satellite -29 2282 1 6 637 2393 82 4 83 chrU 6865068 6865575 -3183462 - DMSAT6 Satellite Satellite -3 467 1 6 637 619 86 11 11 chrU 6865587 6865681 -3183356 - DMSAT6 Satellite Satellite -82 388 295 6 637 2732 108 17 27 chrU 6865800 6868783 -3180254 + DMSAT6 Satellite Satellite 1 2951 -1 6 637 23 78 0 0 chrU 6869380 6869431 -3179606 + AT_rich Low_complexity Low_complexity 1 51 0 6 637 26 30 0 0 chrU 6869477 6869510 -3179527 + AT_rich Low_complexity Low_complexity 1 33 0 6 637 7431 48 81 8 chrU 6869887 6870917 -3178120 - PROTOP_A DNA P 0 1105 1 6 637 204 40 0 0 chrU 6871088 6871113 -3177924 + (CAA)n Simple_repeat Simple_repeat 2 26 0 6 637 33 0 0 0 chrU 6871787 6871820 -3177217 + AT_rich Low_complexity Low_complexity 1 33 0 6 637 806 94 0 0 chrU 6871994 6872111 -3176926 - ARS406_DM Unknown Unknown -236 117 1 6 637 4255 215 19 26 chrU 6872018 6874155 -3174882 + SAR_DM Satellite Satellite 1 2122 -203 6 637 976 59 7 7 chrU 6874073 6874210 -3174827 - ARS406_DM Unknown Unknown -164 189 53 6 637 3345 210 8 15 chrU 6874202 6874996 -3174041 + SAR_DM Satellite Satellite 177 964 -508 6 637 23 0 0 0 chrU 6876214 6876237 -3172800 + AT_rich Low_complexity Low_complexity 1 23 0 6 637 261 159 73 73 chrU 6876600 6876668 -3172369 - Gypsy4_I LTR Gypsy -1897 4391 4324 6 637 284 48 24 0 chrU 6876838 6876880 -3172157 + (TTCTC)n Simple_repeat Simple_repeat 2 44 0 6 637 403 299 42 40 chrU 6877315 6877532 -3171505 - Gypsy4_I LTR Gypsy -2881 3407 3240 6 637 23 33 0 0 chrU 6877532 6877562 -3171475 + AT_rich Low_complexity Low_complexity 1 30 0 6 637 4411 199 18 28 chrU 6878196 6881192 -3167845 + SAR_DM Satellite Satellite 1 2965 -198 6 637 766 79 8 66 chrU 6881294 6881416 -3167621 + Baggins1 LINE LOA 5077 5191 -262 6 637 27 29 0 0 chrU 6882202 6882236 -3166801 + AT_rich Low_complexity Low_complexity 1 34 0 6 637 875 28 19 9 chrU 6882576 6882683 -3166354 + Baggins1 LINE LOA 5346 5453 0 6 637 5495 39 3 21 chrU 6883123 6883798 -3165239 + Baggins1 LINE LOA 4791 5453 0 6 637 359 85 0 0 chrU 6884243 6884290 -3164747 + Baggins1 LINE LOA 4791 4837 -616 6 637 519 0 0 16 chrU 6884390 6884453 -3164584 - IDEFIX_LTR LTR Gypsy -532 62 1 6 637 285 116 0 0 chrU 6884421 6884464 -3164573 + BARI1 DNA Tc1 3 45 -1705 6 637 304 200 0 0 chrU 6885331 6885396 -3163641 + NINJA_I LTR Pao 3368 3432 -2579 6 637 1091 296 98 16 chrU 6886119 6886568 -3162469 + NINJA_I LTR Pao 4196 4681 -1330 6 637 1749 291 49 14 chrU 6886576 6887224 -3161813 + NINJA_I LTR Pao 4839 5509 -502 6 637 14190 3 0 0 chrU 6887481 6889034 -3160003 - G6_DM LINE Jockey -489 1553 1 6 637 1883 9 0 13 chrU 6889032 6889267 -3159770 + S_DM DNA Tc1 1505 1736 0 6 637 340 67 0 0 chrU 6889276 6889321 -3159716 + ROO_LTR LTR Pao 384 428 0 6 637 236 284 69 69 chrU 6890769 6890871 -3158166 - BLASTOPIA_I LTR Gypsy -790 3691 3590 6 637 392 341 59 34 chrU 6891313 6891668 -3157369 - MDG3_I LTR Gypsy -1565 3421 3058 6 637 293 304 48 48 chrU 6892052 6892420 -3156617 - ZAM_I LTR Gypsy -3793 3697 3451 6 637 6659 156 79 127 chrU 6893647 6895472 -3153565 - DIVER2_I LTR Pao -2263 1884 173 6 637 204 40 0 0 chrU 6895472 6895497 -3153540 + (TATG)n Simple_repeat Simple_repeat 3 27 0 6 637 6659 156 79 127 chrU 6895497 6895648 -3153389 - DIVER2_I LTR Pao -3975 172 3 6 637 3168 19 49 5 chrU 6895648 6896017 -3153020 - DIVER2_LTR LTR Pao 0 385 1 6 637 4742 11 47 9 chrU 6896729 6897281 -3151756 - CIRCE LINE Composite -2268 4088 3516 6 637 1780 20 5 0 chrU 6897278 6897477 -3151560 + Baggins1 LINE LOA 3077 3276 -2177 6 637 2893 43 43 0 chrU 6897473 6897825 -3151212 - PROTOP DNA P -4113 367 1 6 637 311 130 0 0 chrU 6897851 6897895 -3151142 + DNAREP1_DM LINE Penelope 445 488 -106 6 637 1417 87 6 12 chrU 6897895 6898209 -3150828 + Mariner2_DM DNA Tc1 1 344 -568 6 637 837 68 102 0 chrU 6898206 6898324 -3150713 - PROTOP DNA P -1107 3373 3244 6 637 1040 52 0 22 chrU 6898324 6898462 -3150575 - PROTOP DNA P -1436 3044 2910 6 637 259 62 0 0 chrU 6898496 6898528 -3150509 + PROTOP DNA P 151 182 -4298 6 637 562 48 351 0 chrU 6898530 6898742 -3150295 + PROTOP DNA P 296 603 -502 6 637 268 81 0 0 chrU 6898725 6898762 -3150275 + PROTOP DNA P 2910 2946 -1534 6 637 437 90 30 0 chrU 6898762 6898829 -3150208 + PROTOP DNA P 3202 3270 -1210 6 637 5055 135 62 18 chrU 6898848 6899700 -3149337 + NINJA_I LTR Pao 2165 3054 -2957 6 637 789 64 45 0 chrU 6899800 6899910 -3149127 + ARS406_DM Unknown Unknown 75 189 -164 6 637 3886 176 38 17 chrU 6899812 6901505 -3147532 - SAR_DM Satellite Satellite -203 1727 1 6 637 3911 176 28 12 chrU 6901517 6902400 -3146637 - SAR_DM Satellite Satellite -396 1076 180 6 637 1725 154 11 14 chrU 6902412 6902761 -3146276 - SAR_DM Satellite Satellite -396 1076 729 6 637 6463 0 1 0 chrU 6902864 6903562 -3145475 + TAHRE LINE telomeric 9752 10450 -13 6 637 240 98 122 0 chrU 6903562 6903603 -3145434 + TART LINE telomeric 8302 8347 -6130 6 637 19791 8 1 3 chrU 6903589 6905821 -3143216 + HETA LINE telomeric 1 2189 -3892 6 637 2098 60 241 0 chrU 6905943 6906275 -3142762 + ACCORD2_I LTR Gypsy 2117 2528 -4684 6 637 36 53 0 0 chrU 6906275 6906332 -3142705 + AT_rich Low_complexity Low_complexity 1 57 0 6 637 4534 64 2 0 chrU 6906336 6906918 -3142119 + ACCORD2_I LTR Gypsy 3468 4050 -3162 6 637 5982 106 55 38 chrU 6906918 6908004 -3141033 + PROTOP_A DNA P 1 1105 0 6 637 2750 131 119 48 chrU 6908004 6908587 -3140450 + ACCORD2_I LTR Gypsy 4272 4896 -2316 6 637 1843 55 145 0 chrU 6908589 6908878 -3140159 + ACCORD2_I LTR Gypsy 5931 6261 -951 6 637 9048 7 1 3 chrU 6908978 6909983 -3139054 + DMRT1B LINE R1 2698 3700 -1483 6 637 2359 64 3 3 chrU 6909970 6910266 -3138771 - R1_DM LINE R1 -3958 1398 1103 6 637 4704 71 7 3 chrU 6910266 6910875 -3138162 - R1_DM LINE R1 -4745 611 1 6 637 6704 32 1 0 chrU 6910908 6911681 -3137356 - R1_DM LINE R1 0 5356 4583 6 637 2309 4 0 0 chrU 6911683 6911934 -3137103 + DMRT1B LINE R1 2378 2628 -2555 6 637 12719 124 81 1 chrU 6912034 6913757 -3135280 + R1_DM LINE R1 3496 5356 0 6 637 9558 50 14 6 chrU 6913790 6914979 -3134058 + R1_DM LINE R1 1 1199 -4157 6 637 3228 196 84 30 chrU 6915079 6916568 -3132469 - SAR_DM Satellite Satellite -432 1568 1 6 637 3429 210 62 22 chrU 6916594 6918021 -3131016 - SAR_DM Satellite Satellite -308 1484 1 6 637 8633 25 7 0 chrU 6918122 6919123 -3129914 + NINJA_I LTR Pao 668 1675 -4336 6 637 15540 18 30 0 chrU 6919119 6921059 -3127978 + NINJA_I LTR Pao 1863 3860 -2151 6 637 5501 11 2 3 chrU 6921159 6921769 -3127268 + BATUMI_I LTR Pao 5812 6420 -1543 6 637 2532 20 3 26 chrU 6921782 6922095 -3126942 - BATUMI_I LTR Pao -661 7302 6997 6 637 5320 24 0 0 chrU 6922090 6922682 -3126355 - R2_DM LINE R2 -1084 2523 1932 6 637 3067 154 38 64 chrU 6922704 6923203 -3125834 - R1_DM LINE R1 -69 5287 4802 6 637 669 14 0 0 chrU 6923201 6923274 -3125763 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2583 6 637 7171 27 6 0 chrU 6923275 6924096 -3124941 - R2_DM LINE R2 0 3607 2782 6 637 2897 93 16 24 chrU 6924196 6927124 -3121913 + DMSAT6 Satellite Satellite 1 2904 -40 6 637 7082 8 14 0 chrU 6927224 6928009 -3121028 + DMRT1B LINE R1 1598 2393 -2790 6 637 7040 74 8 1 chrU 6928005 6928937 -3120100 + TART LINE telomeric 313 1251 -13226 6 637 8337 16 21 0 chrU 6928937 6929905 -3119132 + PROTOP_A DNA P 1 988 -117 6 637 1913 35 0 9 chrU 6929921 6930151 -3118886 - BATUMI_I LTR Pao -4784 3179 2952 6 637 979 52 0 0 chrU 6930251 6930367 -3118670 + Baggins1 LINE LOA 889 1004 -4449 6 637 3495 62 103 0 chrU 6930360 6930825 -3118212 + Baggins1 LINE LOA 1636 2148 -3305 6 637 6318 115 122 56 chrU 6930823 6932474 -3116563 + Baggins1 LINE LOA 2589 4348 -1105 6 637 343 45 0 0 chrU 6932473 6932517 -3116520 + Baggins1 LINE LOA 5356 5399 -54 6 637 249 294 108 42 chrU 6932525 6932960 -3116077 + Gypsy5_I LTR Gypsy 4436 4543 -1966 6 637 11602 126 59 58 chrU 6933277 6936122 -3112915 - CIRCE LINE Composite -2224 4132 1305 6 637 1458 48 4 4 chrU 6936301 6936755 -3112282 + (TATAA)n Simple_repeat Simple_repeat 1 454 0 6 637 259 143 0 0 chrU 6936766 6936815 -3112222 + IDEFIX_LTR LTR Gypsy 12 60 -534 6 637 1759 66 9 0 chrU 6936802 6937028 -3112009 + DM1731_LTR LTR Copia 15 242 -94 6 637 5119 21 0 0 chrU 6937027 6937600 -3111437 + DM1731_I LTR Copia 146 718 -3258 6 637 14758 12 2 0 chrU 6937598 6939223 -3109814 + DM1731_I LTR Copia 1036 2663 -1313 6 637 11012 153 95 72 chrU 6939323 6942245 -3106792 + TART LINE telomeric 9374 12321 -2156 6 637 2427 25 0 0 chrU 6942345 6942619 -3106418 + PROTOP_A DNA P 832 1105 0 6 637 1532 17 0 0 chrU 6942619 6942791 -3106246 + Invader6_LTR LTR Gypsy 222 393 0 6 79 13905 21 0 4 chrU 6945364 6947093 -3101944 + STALKER4_I LTR Gypsy 4450 6171 -359 6 638 1317 17 0 0 chrU 6947147 6947325 -3101712 + STALKER4_I LTR Gypsy 6342 6519 -11 6 638 2753 6 0 6 chrU 6947320 6947649 -3101388 + STALKER4_LTR LTR Gypsy 76 402 0 6 638 3562 10 2 0 chrU 6947865 6948280 -3100757 - SSU-rRNA_Dme rRNA rRNA 0 1995 1580 6 638 5634 29 3 0 chrU 6948380 6949082 -3099955 + DOC3_DM LINE Jockey 2367 3070 -1670 6 638 2851 32 48 3 chrU 6949083 6949768 -3099269 - PROTOP_A DNA P -1 1104 389 6 638 1781 32 0 0 chrU 6949774 6949992 -3099045 - PROTOP_A DNA P -887 218 1 6 638 3039 34 29 0 chrU 6949993 6950376 -3098661 + DOC3_DM LINE Jockey 3065 3458 -1282 6 638 5370 30 3 0 chrU 6950632 6951294 -3097743 + DOC3_DM LINE Jockey 2205 2868 -1872 6 638 858 62 0 0 chrU 6951395 6951507 -3097530 + NINJA_LTR LTR Pao 205 316 -1 6 638 20896 21 25 4 chrU 6951507 6954305 -3094732 - QUASIMODO_I LTR Gypsy -44 6016 3160 6 638 19022 41 29 8 chrU 6954405 6957315 -3091722 + R1_DM LINE R1 28 3000 -2356 6 638 4553 111 48 114 chrU 6957417 6958660 -3090377 - BATUMI_I LTR Pao -6802 1161 1 6 638 1999 36 3 31 chrU 6958660 6958950 -3090087 - BATUMI_I LTR Pao -679 7284 7003 6 638 1184 38 6 0 chrU 6958952 6959111 -3089926 + ROO_I LTR Pao 987 1146 -7110 6 638 6679 21 1 4 chrU 6959478 6960320 -3088717 - PROTOP_A DNA P 0 1105 266 6 638 3362 185 15 19 chrU 6960425 6961354 -3087683 + SAR_DM Satellite Satellite 1 924 -208 6 638 40 21 0 0 chrU 6962252 6962299 -3086738 + AT_rich Low_complexity Low_complexity 1 47 0 6 638 21 95 0 0 chrU 6962506 6962569 -3086468 + AT_rich Low_complexity Low_complexity 1 63 0 6 638 5879 1 5 34 chrU 6962581 6963324 -3085713 + LSU-rRNA_Dme rRNA rRNA 1 722 -3178 6 638 531 131 47 33 chrU 6963424 6963574 -3085463 + NTS_DM Other Other 89 240 0 6 638 285 104 21 0 chrU 6963574 6963622 -3085415 + NTS_DM Other Other 1 49 -191 6 638 1103 133 29 21 chrU 6963713 6963951 -3085086 + NTS_DM Other Other 1 240 0 6 638 261 125 21 0 chrU 6963951 6963999 -3085038 + NTS_DM Other Other 1 49 -191 6 638 1007 155 30 21 chrU 6964085 6964322 -3084715 + NTS_DM Other Other 2 240 0 6 638 285 104 21 0 chrU 6964322 6964370 -3084667 + NTS_DM Other Other 1 49 -191 6 638 1062 142 29 21 chrU 6964452 6964690 -3084347 + NTS_DM Other Other 1 240 0 6 638 262 125 21 0 chrU 6964690 6964738 -3084299 + NTS_DM Other Other 1 49 -191 6 638 1029 142 29 21 chrU 6964820 6965058 -3083979 + NTS_DM Other Other 1 240 0 6 638 262 125 21 0 chrU 6965058 6965106 -3083931 + NTS_DM Other Other 1 49 -191 6 638 24 32 0 0 chrU 6965136 6965167 -3083870 + AT_rich Low_complexity Low_complexity 1 31 0 6 638 1002 141 30 22 chrU 6965192 6965424 -3083613 + NTS_DM Other Other 7 240 0 6 638 262 125 21 0 chrU 6965424 6965472 -3083565 + NTS_DM Other Other 1 49 -191 6 638 1056 137 30 22 chrU 6965560 6965792 -3083245 + NTS_DM Other Other 7 240 0 6 638 285 104 21 0 chrU 6965792 6965840 -3083197 + NTS_DM Other Other 1 49 -191 6 638 1024 154 29 21 chrU 6965922 6966160 -3082877 + NTS_DM Other Other 1 240 0 6 638 302 83 21 0 chrU 6966160 6966208 -3082829 + NTS_DM Other Other 1 49 -191 6 638 869 35 8 26 chrU 6966210 6966327 -3082710 + G2_DM LINE Jockey 1401 1515 -1587 6 638 4188 84 40 40 chrU 6966429 6967170 -3081867 + TART LINE telomeric 2619 3359 -11118 6 638 1875 204 49 64 chrU 6967168 6967790 -3081247 + TART LINE telomeric 3683 4029 -10448 6 638 312 193 52 7 chrU 6967805 6967916 -3081121 + TART LINE telomeric 6004 6105 -8372 6 638 5201 150 72 37 chrU 6967948 6969324 -3079713 + TART LINE telomeric 6734 7670 -6807 6 638 27 0 0 0 chrU 6969535 6969562 -3079475 + AT_rich Low_complexity Low_complexity 1 27 0 6 638 1283 109 4 39 chrU 6969739 6969968 -3079069 - IDEFIX_LTR LTR Gypsy -373 221 1 6 638 502 152 240 35 chrU 6969986 6970240 -3078797 - IDEFIX_I LTR Gypsy -53 5575 5270 6 638 1203 69 29 0 chrU 6970240 6970413 -3078624 + Baggins1 LINE LOA 1 178 -5275 6 638 2332 43 266 0 chrU 6970418 6970883 -3078154 + Baggins1 LINE LOA 438 1026 -4427 6 638 911 64 8 0 chrU 6970877 6971002 -3078035 + Baggins1 LINE LOA 1585 1710 -3743 6 638 8337 50 92 2 chrU 6971134 6972319 -3076718 + Baggins1 LINE LOA 1698 2988 -2465 6 638 1503 10 46 0 chrU 6972419 6972616 -3076421 + Invader3_I LTR Gypsy 4683 4888 0 6 638 1651 88 6 108 chrU 6972616 6972948 -3076089 + Invader3_LTR LTR Gypsy 1 298 0 6 638 2501 177 15 9 chrU 6975486 6976010 -3073027 + TAHRE LINE telomeric 9931 10457 -6 6 638 19469 4 0 0 chrU 6976008 6978292 -3070745 + TAHRE LINE telomeric 5023 7306 -3157 6 638 24 32 0 0 chrU 6978459 6978490 -3070547 + AT_rich Low_complexity Low_complexity 1 31 0 6 638 8127 24 46 1 chrU 6978525 6979585 -3069452 - PROTOP DNA P 0 4480 3373 6 638 3925 28 16 16 chrU 6979574 6980084 -3068953 - PROTOP DNA P -3923 557 48 6 638 597 134 443 0 chrU 6980095 6980296 -3068741 + Gypsy12A_LTR LTR Gypsy 811 1100 -1180 6 638 651 109 27 0 chrU 6980384 6980494 -3068543 + Gypsy12A_LTR LTR Gypsy 2012 2124 -156 6 638 352 41 0 0 chrU 6980517 6980566 -3068471 - DM297_I LTR Gypsy -1405 4762 4714 6 638 870 324 15 6 chrU 6980653 6980991 -3068046 + NOMAD_I LTR Gypsy 6079 6419 -153 6 638 763 167 20 146 chrU 6980993 6981246 -3067791 + Gypsy12A_LTR LTR Gypsy 1180 1400 -880 6 638 8388 192 54 9 chrU 6981374 6983323 -3065714 - ROVER-I_DM LTR Gypsy -1787 4797 2761 6 638 870 184 0 0 chrU 6983328 6983492 -3065545 - ROVER-I_DM LTR Gypsy -4094 2490 2327 6 638 3071 20 86 0 chrU 6983492 6983886 -3065151 - ROO_LTR LTR Pao 0 428 1 6 638 1780 49 0 0 chrU 6983886 6984132 -3064905 - ROO_I LTR Pao 0 8256 8011 6 638 963 0 8 0 chrU 6984138 6984256 -3064781 + FW_DM LINE Jockey 2894 3012 -1680 6 638 4993 123 41 0 chrU 6984357 6985167 -3063870 - TART_B1 LINE telomeric -5493 5161 4319 6 638 1611 57 0 19 chrU 6985161 6985375 -3063662 - TART_B1 LINE telomeric -7129 3525 3316 6 638 3936 96 80 0 chrU 6985386 6986011 -3063026 - TART_B1 LINE telomeric -7599 3055 2381 6 638 1803 17 94 0 chrU 6986010 6986245 -3062792 - DMRT1A LINE R1 -6 5177 4921 6 638 1827 121 7 3 chrU 6986221 6986520 -3062517 - TART LINE telomeric -7444 7033 6734 6 638 1378 218 29 89 chrU 6986548 6987237 -3061800 - TART LINE telomeric -10448 4029 3789 6 638 5668 1 0 0 chrU 6987603 6988260 -3060777 - QUASIMODO_LTR LTR Gypsy 0 658 2 6 638 204 40 0 0 chrU 6988260 6988285 -3060752 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 638 267 188 0 0 chrU 6989233 6989313 -3059724 + ROO_I LTR Pao 653 732 -7524 6 638 2547 45 79 36 chrU 6989828 6990219 -3058818 + TART LINE telomeric 7295 7702 -6775 6 638 10020 12 0 1 chrU 6990319 6991492 -3057545 - MICROPIA_I LTR Gypsy -3304 1172 1 6 638 3806 19 0 61 chrU 6991492 6992010 -3057027 - MICROPIA_LTR LTR Gypsy 0 476 1 6 638 2027 87 190 22 chrU 6992010 6992398 -3056639 + ACCORD2_I LTR Gypsy 324 778 -6434 6 638 1082 101 5 58 chrU 6992398 6992587 -3056450 + ACCORD2_I LTR Gypsy 1188 1366 -5846 6 638 26 50 0 0 chrU 6992701 6992741 -3056296 + AT_rich Low_complexity Low_complexity 1 40 0 6 638 403 235 53 83 chrU 6992904 6993169 -3055868 + Gypsy3_LTR LTR Gypsy 112 368 -30 6 638 3804 192 20 24 chrU 6993317 6994506 -3054531 - SAR_DM Satellite Satellite -396 1185 1 6 638 351 213 9 18 chrU 6994496 6994606 -3054431 + XDMR_DM Unknown Unknown 252 360 0 6 638 4064 194 18 24 chrU 6994520 6996174 -3052863 - SAR_DM Satellite Satellite -353 1644 1 6 638 22880 27 15 1 chrU 6996277 6999153 -3049884 - NINJA_I LTR Pao -1533 4478 1562 6 638 2785 21 0 0 chrU 6999255 6999589 -3049448 - G2_DM LINE Jockey -2582 520 187 6 638 2828 49 3 0 chrU 6999587 6999955 -3049082 + R2_DM LINE R2 2235 2603 -1004 6 638 393 20 0 0 chrU 6999951 7000000 -3049037 + G2_DM LINE Jockey 453 501 -2601 6 638 13106 29 7 1 chrU 7000000 7001533 -3047504 + G2_DM LINE Jockey 502 2044 -1058 6 638 1247 7 7 7 chrU 7001518 7001665 -3047372 + R2_DM LINE R2 2815 2961 -646 6 638 3856 33 11 4 chrU 7001664 7002124 -3046913 + R2_DM LINE R2 3094 3556 -51 6 638 1169 16 0 0 chrU 7002230 7002358 -3046679 - BATUMI_I LTR Pao -7835 128 1 6 638 1479 33 121 45 chrU 7002358 7002582 -3046455 - BATUMI_LTR LTR Pao 0 272 32 6 638 480 267 78 0 chrU 7002578 7002758 -3046279 + QUASIMODO_I LTR Gypsy 4834 5027 -1033 6 638 791 121 67 67 chrU 7002801 7002996 -3046041 + ROVER-LTR_DM LTR Gypsy 173 367 0 6 638 2898 254 43 81 chrU 7003013 7004686 -3044351 + ROVER-I_DM LTR Gypsy 26 1635 -4949 6 638 3456 8 0 0 chrU 7004715 7005093 -3043944 + DOC LINE Jockey 31 408 -4317 6 638 2524 105 18 56 chrU 7005193 7008040 -3040997 - DMSAT6 Satellite Satellite -313 2738 1 6 638 930 95 0 0 chrU 7008153 7008279 -3040758 - HETA LINE telomeric -2970 3111 2986 6 638 2587 47 9 3 chrU 7008279 7008597 -3040440 - DIVER_I LTR Pao -5323 320 1 6 638 974 126 0 25 chrU 7008698 7008861 -3040176 - DIVER_LTR LTR Pao -61 163 5 6 638 456 36 0 0 chrU 7008863 7008919 -3040118 - DIVER_I LTR Pao -1 5642 5587 6 638 18186 32 6 1 chrU 7008925 7011013 -3038024 - DIVER_I LTR Pao -470 5173 3075 6 638 3899 218 31 23 chrU 7011115 7012433 -3036604 - SAR_DM Satellite Satellite -262 2879 1510 6 638 411 161 11 22 chrU 7012433 7012522 -3036515 + ARS406_DM Unknown Unknown 102 189 -164 6 638 3899 218 31 23 chrU 7012522 7013971 -3035066 - SAR_DM Satellite Satellite -262 1509 1 6 638 1091 283 3 3 chrU 7014367 7014658 -3034379 + Gypsy6_I LTR Gypsy 2306 2596 -4416 6 638 1768 270 104 7 chrU 7014670 7015208 -3033829 + Gypsy2_I LTR Gypsy 1940 2529 -3606 6 638 1256 45 130 0 chrU 7015212 7015381 -3033656 + PROTOP DNA P 3133 3324 -1156 6 638 2512 75 32 20 chrU 7015381 7015797 -3033240 + Gypsy6A_LTR LTR Gypsy 1 420 0 6 638 2894 45 22 139 chrU 7015797 7016293 -3032744 + Gypsy6_I LTR Gypsy 1 438 -6574 6 638 5682 8 0 0 chrU 7016311 7016929 -3032108 + Gypsy6_I LTR Gypsy 1044 1661 -5351 6 638 541 221 107 76 chrU 7017607 7017896 -3031141 + NINJA_LTR LTR Pao 1 298 -19 6 638 1226 141 57 29 chrU 7017913 7018280 -3030757 + NINJA_I LTR Pao 3 499 -5512 6 638 2214 128 0 3 chrU 7018278 7018607 -3030430 + NINJA_I LTR Pao 777 1104 -4907 6 638 356 47 0 0 chrU 7018604 7018647 -3030390 + NINJA_I LTR Pao 1502 1544 -4467 6 638 1756 138 83 0 chrU 7018654 7018930 -3030107 + NINJA_I LTR Pao 1984 2282 -3729 6 638 1060 79 66 7 chrU 7019139 7019291 -3029746 + Mariner2_DM DNA Tc1 439 599 -313 6 638 746 97 207 0 chrU 7019293 7019438 -3029599 + Mariner2_DM DNA Tc1 718 892 -20 6 638 1864 68 22 19 chrU 7019984 7020253 -3028784 - CIRCE LINE Composite -1106 5250 4981 6 638 1758 67 202 7 chrU 7020607 7021027 -3028010 - CIRCE LINE Composite -1376 4980 4479 6 638 1301 107 0 97 chrU 7021043 7021291 -3027746 - DIVER_LTR LTR Pao 0 224 1 6 638 13845 21 4 0 chrU 7021291 7022836 -3026201 - DIVER_I LTR Pao 0 5643 4093 6 638 8756 54 37 35 chrU 7022937 7024117 -3024920 + Gypsy12_LTR LTR Gypsy 23 1205 -1131 6 638 5776 27 22 27 chrU 7024425 7025137 -3023900 + Gypsy12_LTR LTR Gypsy 1628 2336 0 6 638 4748 40 5 35 chrU 7025137 7025785 -3023252 + Gypsy12_I LTR Gypsy 1 685 -4861 6 638 549 0 0 0 chrU 7025886 7025947 -3023090 + (GAGAA)n Simple_repeat Simple_repeat 5 65 0 6 638 1281 61 0 17 chrU 7026002 7026482 -3022555 + (AATAG)n Simple_repeat Simple_repeat 1 471 0 6 638 2195 57 11 0 chrU 7026491 7026773 -3022264 - G2_DM LINE Jockey -420 2682 2398 6 638 3228 257 88 32 chrU 7027012 7028260 -3020777 + G6_DM LINE Jockey 243 1560 -482 6 638 863 87 25 0 chrU 7028260 7028421 -3020616 + (CTATT)n Simple_repeat Simple_repeat 5 169 0 6 638 313 183 9 9 chrU 7028448 7028473 -3020564 + (TTATA)n Simple_repeat Simple_repeat 4 28 0 6 638 1237 28 11 17 chrU 7028473 7028654 -3020383 + (CTATT)n Simple_repeat Simple_repeat 1 180 0 6 638 313 183 9 9 chrU 7028654 7028733 -3020304 + (TTATA)n Simple_repeat Simple_repeat 4 83 0 6 638 8835 23 4 0 chrU 7028833 7029839 -3019198 - R1_DM LINE R1 -2442 2914 1905 6 638 5340 36 29 1 chrU 7029837 7030497 -3018540 - R1_DM LINE R1 -3883 1473 796 6 638 4539 62 3 3 chrU 7030487 7031055 -3017982 - R1_DM LINE R1 -4765 591 24 6 638 5101 31 2 3 chrU 7031089 7031679 -3017358 - R1_DM LINE R1 0 5356 4768 6 638 15250 50 13 2 chrU 7031779 7033664 -3015373 - R1_DM LINE R1 -3450 1906 1 6 638 3690 17 19 0 chrU 7033697 7034114 -3014923 - R1_DM LINE R1 0 5356 4932 6 638 4459 31 18 0 chrU 7034109 7034623 -3014414 - R1_DM LINE R1 -551 4805 4283 6 638 4459 199 22 26 chrU 7034732 7037541 -3011496 - SAR_DM Satellite Satellite -291 2796 1 6 638 942 106 0 0 chrU 7037422 7037564 -3011473 + ARS406_DM Unknown Unknown 1 142 -211 6 638 589 316 15 27 chrU 7037665 7037928 -3011109 - BS LINE Jockey -1560 3566 3307 6 638 562 16 0 0 chrU 7038072 7038134 -3010903 + PROTOP_A DNA P 1 62 -1043 6 638 624 203 86 11 chrU 7038305 7038479 -3010558 - Gypsy_LTR LTR Gypsy -115 367 181 6 638 21 89 0 0 chrU 7040617 7040673 -3008364 + AT_rich Low_complexity Low_complexity 1 56 0 6 638 23 68 0 0 chrU 7040711 7040755 -3008282 + AT_rich Low_complexity Low_complexity 1 44 0 6 638 33 0 0 0 chrU 7040801 7040834 -3008203 + AT_rich Low_complexity Low_complexity 1 33 0 6 638 2426 59 115 0 chrU 7041183 7041522 -3007515 - PROTOP_A DNA P 0 1105 728 6 638 23 68 0 0 chrU 7042007 7042051 -3006986 + AT_rich Low_complexity Low_complexity 1 44 0 6 638 4773 114 54 74 chrU 7042474 7043439 -3005598 - PROTOP_B DNA P 0 1153 208 6 638 332 24 0 0 chrU 7043541 7043582 -3005455 + Gypsy12_I LTR Gypsy 5506 5546 0 6 638 2174 207 24 49 chrU 7043581 7044129 -3004908 + Gypsy12_LTR LTR Gypsy 1 534 -1802 6 638 255 50 200 0 chrU 7045255 7045295 -3003742 + PROTOP_A DNA P 1 48 -1057 6 638 1904 106 187 0 chrU 7045298 7045726 -3003311 + Gypsy12_I LTR Gypsy 2449 2956 -2590 6 638 4734 104 0 6 chrU 7045727 7046376 -3002661 + Gypsy12_I LTR Gypsy 1364 2008 -3538 6 638 18716 25 45 1 chrU 7046476 7048724 -3000313 - R1_DM LINE R1 -45 5311 2966 6 638 1062 39 0 8 chrU 7048723 7048852 -3000185 - R1_DM LINE R1 -2958 2398 2271 6 638 439 20 0 0 chrU 7048845 7048895 -3000142 + CIRCE LINE Composite 4931 4980 -1376 6 638 423 49 0 32 chrU 7049247 7049310 -2999727 + CIRCE LINE Composite 4981 5041 -1315 6 638 14050 34 9 0 chrU 7049410 7051045 -2997992 + R1_DM LINE R1 1163 2812 -2544 6 638 10658 17 1 1 chrU 7051037 7052243 -2996794 + R1_DM LINE R1 2924 4129 -1227 6 638 643 222 6 19 chrU 7052361 7052517 -2996520 + HETRP_DM Satellite Satellite 1529 1682 -190 6 638 691 196 11 69 chrU 7052619 7052794 -2996243 + HETRP_DM Satellite Satellite 1518 1682 -190 6 638 705 191 13 26 chrU 7052918 7053074 -2995963 + HETRP_DM Satellite Satellite 1529 1682 -190 6 638 708 191 13 26 chrU 7053195 7053351 -2995686 + HETRP_DM Satellite Satellite 1529 1682 -190 6 638 627 199 6 76 chrU 7053453 7053611 -2995426 + HETRP_DM Satellite Satellite 1518 1664 -208 6 638 690 201 13 25 chrU 7053756 7053914 -2995123 + HETRP_DM Satellite Satellite 1529 1684 -188 6 638 643 196 21 28 chrU 7054067 7054209 -2994828 + HETRP_DM Satellite Satellite 1529 1669 -203 6 638 180 0 0 0 chrU 7054340 7054360 -2994677 + (GA)n Simple_repeat Simple_repeat 2 21 0 6 638 561 210 8 16 chrU 7054360 7054486 -2994551 + HETRP_DM Satellite Satellite 1540 1664 -208 6 638 690 201 13 25 chrU 7054631 7054789 -2994248 + HETRP_DM Satellite Satellite 1529 1684 -188 6 638 643 196 21 28 chrU 7054942 7055084 -2993953 + HETRP_DM Satellite Satellite 1529 1669 -203 6 638 4552 199 21 25 chrU 7055273 7058102 -2990935 - SAR_DM Satellite Satellite -603 2817 1 6 638 370 178 50 101 chrU 7058316 7058435 -2990602 - Copia_I LTR Copia -80 4513 4401 6 638 22 56 0 0 chrU 7058480 7058516 -2990521 + AT_rich Low_complexity Low_complexity 1 36 0 6 638 2551 165 91 17 chrU 7058669 7059470 -2989567 + TART LINE telomeric 8950 9913 -4564 6 638 345 187 50 101 chrU 7060244 7060363 -2988674 - Copia_I LTR Copia -80 4513 4401 6 638 22 56 0 0 chrU 7060390 7060426 -2988611 + AT_rich Low_complexity Low_complexity 1 36 0 6 638 1042 184 321 12 chrU 7060560 7060881 -2988156 + HETA LINE telomeric 4020 4439 -1642 6 638 458 194 28 56 chrU 7060882 7061024 -2988013 + TAHRE LINE telomeric 9356 9493 -970 6 638 7829 76 31 16 chrU 7061167 7062290 -2986747 - MDG1_I LTR Gypsy -5456 1140 1 6 638 1792 90 0 4 chrU 7062290 7062535 -2986502 - MDG1_LTR LTR Gypsy -30 412 169 6 638 339 105 0 0 chrU 7062538 7062595 -2986442 + (TTA)n Simple_repeat Simple_repeat 3 59 0 6 638 8446 28 2 0 chrU 7062611 7063580 -2985457 - R1_DM LINE R1 -151 5205 4235 6 638 3327 23 3 3 chrU 7063569 7063955 -2985082 - R1_DM LINE R1 -1255 4101 3716 6 638 3064 198 9 16 chrU 7064068 7064977 -2984060 + SAR_DM Satellite Satellite 1 902 -558 6 638 941 252 26 19 chrU 7064973 7065281 -2983756 - XDMR_DM Unknown Unknown -45 315 6 6 638 4585 203 21 24 chrU 7065015 7066878 -2982159 + SAR_DM Satellite Satellite 1 1857 -216 6 638 3416 187 43 24 chrU 7066978 7068496 -2980541 - SAR_DM Satellite Satellite -441 1548 1 6 638 1124 77 0 0 chrU 7068400 7068556 -2980481 + ARS406_DM Unknown Unknown 1 156 -197 6 638 4548 209 29 35 chrU 7068532 7069800 -2979237 - SAR_DM Satellite Satellite -181 1260 1 6 638 2778 106 11 32 chrU 7069919 7072698 -2976339 - DMSAT6 Satellite Satellite 0 2721 1 6 638 1619 16 0 0 chrU 7072822 7073014 -2976023 + G2_DM LINE Jockey 2906 3097 -5 6 638 1627 235 70 0 chrU 7073028 7073428 -2975609 + Gypsy5_I LTR Gypsy 6081 6508 -1 6 638 732 122 18 114 chrU 7073435 7073601 -2975436 + Gypsy5_LTR LTR Gypsy 77 226 -204 6 638 636 174 7 20 chrU 7073833 7073985 -2975052 - DNAREP1_DM LINE Penelope -316 278 129 6 638 454 184 36 100 chrU 7073999 7074239 -2974798 + DNAREP1_DM LINE Penelope 136 328 -266 6 638 796 96 112 0 chrU 7074418 7074543 -2974494 - DNAREP1_DM LINE Penelope -34 560 422 6 638 668 196 28 39 chrU 7075001 7075234 -2973803 + DNAREP1_DM LINE Penelope 115 332 -262 6 638 1450 162 25 9 chrU 7075274 7075597 -2973440 - ROVER-I_DM LTR Gypsy -200 6384 6057 6 638 369 44 0 0 chrU 7075597 7075642 -2973395 + Invader2_LTR LTR Gypsy 1 45 -221 6 638 9690 55 11 2 chrU 7075742 7076955 -2972082 - R1_DM LINE R1 -4109 1247 24 6 638 4258 33 4 0 chrU 7076989 7077479 -2971558 - R1_DM LINE R1 0 5356 4865 6 638 21 0 0 0 chrU 7077646 7077667 -2971370 + AT_rich Low_complexity Low_complexity 1 21 0 6 639 923 62 8 0 chrU 7078661 7078791 -2970246 - DM297_I LTR Gypsy -566 5601 5471 6 639 200 34 0 33 chrU 7078800 7078830 -2970207 + (TTA)n Simple_repeat Simple_repeat 2 30 0 6 639 1881 82 46 7 chrU 7078831 7079112 -2969925 - DM297_I LTR Gypsy -841 5326 5035 6 639 273 100 0 0 chrU 7079143 7079183 -2969854 - BARI1 DNA Tc1 -1708 42 3 6 639 4425 47 38 3 chrU 7079151 7079725 -2969312 + IDEFIX_LTR LTR Gypsy 1 594 0 6 639 10042 50 15 3 chrU 7080196 7081476 -2967561 + IDEFIX_I LTR Gypsy 1 1295 -4333 6 639 859 11 0 0 chrU 7081576 7081670 -2967367 + DM176_I LTR Gypsy 6327 6420 0 6 639 4500 10 2 0 chrU 7081670 7082176 -2966861 + DM176_LTR LTR Gypsy 1 507 0 6 639 37 23 0 0 chrU 7083282 7083326 -2965711 + AT_rich Low_complexity Low_complexity 1 44 0 6 639 967 97 6 19 chrU 7083441 7083598 -2965439 - DNAREP1_DM LINE Penelope -439 155 1 6 639 49 80 0 0 chrU 7083672 7083784 -2965253 + AT_rich Low_complexity Low_complexity 1 112 0 6 639 7980 23 11 0 chrU 7084491 7085397 -2963640 - R1_DM LINE R1 -530 4826 3911 6 639 4730 63 7 3 chrU 7085395 7085996 -2963041 - R1_DM LINE R1 -4753 603 1 6 639 11358 20 1 1 chrU 7086029 7087305 -2961732 - R1_DM LINE R1 0 5356 4081 6 639 2138 42 3 34 chrU 7087412 7087704 -2961333 - BATUMI_I LTR Pao -679 7284 7002 6 639 1859 5 0 9 chrU 7087704 7087915 -2961122 - BATUMI_I LTR Pao 0 7963 7755 6 639 5280 10 0 5 chrU 7087905 7088504 -2960533 + BATUMI_I LTR Pao 7368 7963 0 6 639 2155 38 3 37 chrU 7088504 7088798 -2960239 + BATUMI_I LTR Pao 7002 7285 -678 6 639 3105 38 95 0 chrU 7088797 7089448 -2959589 + DOC3_DM LINE Jockey 3727 4439 -301 6 639 4385 47 24 2 chrU 7089445 7089983 -2959054 + BS3_DM LINE Jockey 465 1014 -776 6 639 775 264 19 19 chrU 7090000 7090216 -2958821 + BS2 LINE Jockey 2298 2513 -2208 6 639 6155 49 52 1 chrU 7090316 7091087 -2957950 + DMCR1A LINE CR1 660 1469 -3001 6 639 2032 93 0 0 chrU 7091105 7091374 -2957663 + DMCR1A LINE CR1 1734 2002 -2468 6 639 2518 61 27 0 chrU 7091373 7091701 -2957336 + DMCR1A LINE CR1 2114 2450 -2020 6 639 865 91 8 0 chrU 7091682 7091803 -2957234 + DMCR1A LINE CR1 3035 3156 -1314 6 639 6702 62 37 0 chrU 7091798 7092667 -2956370 + DMCR1A LINE CR1 3505 4405 -65 6 639 224 194 16 16 chrU 7092722 7092785 -2956252 + (TAA)n Simple_repeat Simple_repeat 2 64 0 6 639 3383 20 0 12 chrU 7093220 7093624 -2955413 - DM176_I LTR Gypsy -6021 399 1 6 639 4263 8 9 46 chrU 7093624 7094150 -2954887 - DM176_LTR LTR Gypsy 0 507 1 6 639 1890 180 171 4 chrU 7094367 7094908 -2954129 - TART LINE telomeric -4961 9516 8950 6 639 370 178 50 101 chrU 7095142 7095261 -2953776 + Copia_I LTR Copia 4401 4513 -80 6 639 24 0 0 0 chrU 7095995 7096019 -2953018 + AT_rich Low_complexity Low_complexity 1 24 0 6 639 36 40 0 0 chrU 7096364 7096414 -2952623 + AT_rich Low_complexity Low_complexity 1 50 0 6 639 3414 28 5 0 chrU 7096553 7096944 -2952093 - Invader6_LTR LTR Gypsy 0 393 1 6 639 25 0 0 0 chrU 7097412 7097437 -2951600 + AT_rich Low_complexity Low_complexity 1 25 0 6 639 24 53 0 0 chrU 7097529 7097567 -2951470 + AT_rich Low_complexity Low_complexity 1 38 0 6 639 687 305 168 22 chrU 7098365 7098913 -2950124 + Gypsy5_I LTR Gypsy 2144 2771 -3738 6 639 2743 92 30 36 chrU 7099018 7101313 -2947724 - DMSAT6 Satellite Satellite -80 2280 1 6 639 2718 85 15 19 chrU 7101339 7101807 -2947230 - DMSAT6 Satellite Satellite 0 470 5 6 639 258 32 0 0 chrU 7101910 7101941 -2947096 - BATUMI_I LTR Pao -3618 4345 4315 6 639 15602 48 28 12 chrU 7102092 7104086 -2944951 - BATUMI_I LTR Pao -3643 4320 2297 6 639 4944 40 40 16 chrU 7104075 7104705 -2944332 - BATUMI_I LTR Pao -6254 1709 1065 6 639 4786 4 4 0 chrU 7104805 7105336 -2943701 + QUASIMODO_LTR LTR Gypsy 44 576 -82 6 639 5593 148 50 15 chrU 7105334 7106437 -2942600 - DMRT1B LINE R1 -3964 1219 2 6 639 5813 36 105 12 chrU 7106645 7107478 -2941559 + TRANSIB3 DNA Transib 397 1306 -1577 6 639 556 29 0 0 chrU 7107487 7107555 -2941482 + TRANSIB3 DNA Transib 2392 2459 -424 6 639 377 107 0 0 chrU 7107708 7107764 -2941273 + ARS406_DM Unknown Unknown 78 133 -220 6 639 2330 205 31 10 chrU 7107763 7108374 -2940663 - SAR_DM Satellite Satellite -668 804 181 6 639 677 165 0 8 chrU 7108267 7108401 -2940636 + ARS406_DM Unknown Unknown 1 133 -220 6 639 3837 216 56 31 chrU 7108400 7110493 -2938544 - SAR_DM Satellite Satellite -316 2145 1 6 639 4300 143 13 11 chrU 7110593 7111705 -2937332 - G2_DM LINE Jockey -299 1743 4 6 639 4733 31 2 7 chrU 7112613 7113206 -2935831 + IDEFIX_LTR LTR Gypsy 5 594 0 6 639 2598 106 29 15 chrU 7113490 7116279 -2932758 - DMSAT6 Satellite Satellite -251 2827 1 6 639 4937 42 58 0 chrU 7116379 7117020 -2932017 - IDEFIX_I LTR Gypsy -3576 2052 1375 6 639 1428 220 30 0 chrU 7117049 7117345 -2931692 + Gypsy5_I LTR Gypsy 418 722 -5787 6 639 2056 238 72 14 chrU 7117348 7118066 -2930971 + Gypsy5_I LTR Gypsy 540 1299 -5210 6 639 756 209 147 0 chrU 7118094 7118271 -2930766 + Gypsy5_I LTR Gypsy 1367 1569 -4940 6 639 3877 192 44 16 chrU 7118289 7119145 -2929892 + Gypsy5_I LTR Gypsy 1726 2605 -3904 6 639 614 297 3 13 chrU 7119270 7119577 -2929460 + Gypsy11_I LTR Gypsy 3084 3387 -137 6 639 21 57 0 0 chrU 7119730 7119765 -2929272 + AT_rich Low_complexity Low_complexity 1 35 0 6 639 202 198 11 69 chrU 7119818 7119905 -2929132 + A-rich Low_complexity Low_complexity 6 87 0 6 639 351 57 19 6 chrU 7119905 7119985 -2929052 + STALKER4_I LTR Gypsy 6491 6530 0 6 639 2149 54 114 51 chrU 7119985 7120169 -2928868 + Stalker3_LTR LTR Gypsy 1 201 -171 6 639 207 0 0 0 chrU 7120169 7120192 -2928845 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 6 639 2149 54 114 51 chrU 7120192 7120357 -2928680 + Stalker3_LTR LTR Gypsy 202 371 -1 6 639 2476 108 55 32 chrU 7120357 7120826 -2928211 - HETA LINE telomeric -758 5323 4844 6 639 408 59 0 0 chrU 7120819 7120870 -2928167 - HETA LINE telomeric -2192 3889 3839 6 639 2045 51 14 4 chrU 7120869 7121144 -2927893 - HETA LINE telomeric -1 6080 5803 6 639 5074 104 55 31 chrU 7121158 7122060 -2926977 - HETA LINE telomeric -590 5491 4568 6 639 354 265 78 26 chrU 7123073 7123299 -2925738 + BURDOCK_I LTR Gypsy 842 1079 -5209 6 639 3289 13 0 0 chrU 7125048 7125425 -2923612 - G2_DM LINE Jockey -710 2392 2016 6 639 9255 16 61 0 chrU 7125428 7126517 -2922520 - G2_DM LINE Jockey -1779 1323 169 6 639 11186 24 17 3 chrU 7126510 7127835 -2921202 + STALKER4_I LTR Gypsy 3656 4999 -1531 6 639 21 0 0 0 chrU 7129908 7129929 -2919108 + AT_rich Low_complexity Low_complexity 1 21 0 6 639 3516 125 0 24 chrU 7130820 7131353 -2917684 + Gypsy12_I LTR Gypsy 2978 3497 -2049 6 639 5072 142 9 1 chrU 7131772 7132541 -2916496 + Gypsy12_I LTR Gypsy 3488 4262 -1284 6 639 6471 111 23 56 chrU 7132543 7133604 -2915433 + Gypsy12_I LTR Gypsy 4507 5532 -14 6 639 3466 51 21 0 chrU 7133704 7134139 -2914898 + TART_B1 LINE telomeric 3209 3652 -7002 6 639 3031 97 7 0 chrU 7134136 7134547 -2914490 + TART_B1 LINE telomeric 4297 4710 -5944 6 639 9241 135 38 45 chrU 7134537 7136380 -2912657 - TART_B1 LINE telomeric -7302 3352 1522 6 639 4225 201 15 24 chrU 7136587 7139364 -2909673 - SAR_DM Satellite Satellite -366 2753 1 6 639 583 456 50 9 chrU 7139247 7139588 -2909449 + XDMR_DM Unknown Unknown 6 360 0 6 639 4710 191 21 28 chrU 7139470 7142232 -2906805 - SAR_DM Satellite Satellite -318 2741 1 6 639 22 0 0 0 chrU 7143177 7143199 -2905838 + AT_rich Low_complexity Low_complexity 1 22 0 6 639 265 312 40 40 chrU 7143805 7143982 -2905055 - Gypsy6_I LTR Gypsy -2298 4714 4538 6 639 681 292 24 73 chrU 7144487 7145092 -2903945 - GTWIN_I LTR Gypsy -2298 3562 3045 6 639 34 42 0 0 chrU 7145632 7145680 -2903357 + AT_rich Low_complexity Low_complexity 1 48 0 6 639 356 167 42 92 chrU 7145767 7145886 -2903151 - Copia_I LTR Copia -80 4513 4401 6 639 22 56 0 0 chrU 7145931 7145967 -2903070 + AT_rich Low_complexity Low_complexity 1 36 0 6 639 2580 172 29 17 chrU 7146101 7146720 -2902317 + TART LINE telomeric 8950 9513 -4964 6 639 875 252 104 27 chrU 7146722 7147057 -2901980 + TAHRE LINE telomeric 9746 10106 -357 6 639 592 98 35 18 chrU 7147043 7147157 -2901880 + HETA LINE telomeric 5795 5910 -171 6 639 34 24 0 0 chrU 7147167 7147208 -2901829 + AT_rich Low_complexity Low_complexity 1 41 0 6 639 974 254 16 13 chrU 7148061 7148372 -2900665 - XDMR_DM Unknown Unknown -43 317 6 6 639 4414 222 25 29 chrU 7148105 7153637 -2895400 + SAR_DM Satellite Satellite 1 5509 -203 6 639 772 49 10 0 chrU 7153556 7153658 -2895379 - ARS406_DM Unknown Unknown -164 189 87 6 639 2275 39 100 5 chrU 7153759 7154361 -2894676 + PROTOP DNA P 55 823 -3657 6 639 5689 18 9 0 chrU 7154356 7154393 -2894644 + PROTOP DNA P 3802 3838 -642 6 639 306 0 0 0 chrU 7154393 7154427 -2894610 + (TAA)n Simple_repeat Simple_repeat 3 36 0 6 639 5689 18 9 0 chrU 7154427 7155062 -2893975 + PROTOP DNA P 3839 4478 -2 6 639 2027 59 88 37 chrU 7155062 7155410 -2893627 + DM176_LTR LTR Gypsy 130 481 -26 6 639 2890 26 0 0 chrU 7155410 7155753 -2893284 - IDEFIX_I LTR Gypsy -3449 2179 1837 6 639 4725 30 2 2 chrU 7155754 7156328 -2892709 - IDEFIX_LTR LTR Gypsy -20 574 1 6 639 283 98 0 0 chrU 7156296 7156337 -2892700 + BARI1 DNA Tc1 3 43 -1707 6 639 21 0 0 0 chrU 7156415 7156436 -2892601 + AT_rich Low_complexity Low_complexity 1 21 0 6 639 339 73 0 154 chrU 7156436 7156501 -2892536 + Invader1_LTR LTR Gypsy 1 55 -368 6 639 2228 11 7 4 chrU 7156604 7156877 -2892160 + DM176_I LTR Gypsy 4803 5076 -1344 6 639 2210 0 0 0 chrU 7156877 7157131 -2891906 + DM176_I LTR Gypsy 6167 6420 0 6 639 2266 14 0 78 chrU 7157131 7157438 -2891599 + DM176_LTR LTR Gypsy 1 283 -224 6 639 2072 28 16 0 chrU 7157439 7157692 -2891345 + DM176_LTR LTR Gypsy 251 507 0 6 639 2968 124 192 196 chrU 7158001 7159248 -2889789 + MDG1_I LTR Gypsy 2 1242 -5354 6 639 274 68 22 22 chrU 7159448 7159493 -2889544 + Invader1_I LTR Gypsy 3142 3186 0 6 639 3587 14 7 5 chrU 7159493 7159915 -2889122 + Invader1_LTR LTR Gypsy 1 423 0 6 639 876 104 22 0 chrU 7159964 7160098 -2888939 + CIRCE LINE Composite 3632 3768 -2588 6 639 912 117 0 0 chrU 7160142 7160270 -2888767 + CIRCE LINE Composite 4137 4264 -2092 6 639 3263 74 53 21 chrU 7160286 7160797 -2888240 + CIRCE LINE Composite 4454 4980 -1376 6 639 3630 103 31 24 chrU 7160984 7161602 -2887435 - IDEFIX_I LTR Gypsy -1780 3848 3227 6 639 1884 31 0 0 chrU 7161632 7161854 -2887183 - DMRT1A LINE R1 -9 5174 4953 6 639 2889 15 0 0 chrU 7161854 7162184 -2886853 - DMRT1A LINE R1 -395 4788 4459 6 639 486 186 54 60 chrU 7162285 7162451 -2886586 + ROVER-LTR_DM LTR Gypsy 203 367 0 6 639 2695 261 27 132 chrU 7162451 7165016 -2884021 + ROVER-I_DM LTR Gypsy 1 2296 -4288 6 639 327 68 0 0 chrU 7165121 7165165 -2883872 - TART LINE telomeric -10751 3726 3683 6 639 8776 70 35 23 chrU 7165163 7166462 -2882575 - TART LINE telomeric -11118 3359 2045 6 639 8194 126 82 17 chrU 7166453 7167845 -2881192 - TART_B1 LINE telomeric -4317 6337 4856 6 639 5437 3 2 0 chrU 7167945 7168544 -2880493 + BARI_DM DNA Tc1 1128 1727 -1 6 639 15105 1 22 0 chrU 7168544 7170230 -2878807 + BARI_DM DNA Tc1 4 1727 -1 6 639 4080 0 0 0 chrU 7170230 7170670 -2878367 + BARI_DM DNA Tc1 4 443 -1285 6 639 4998 9 0 0 chrU 7170771 7171326 -2877711 + ROO_I LTR Pao 6131 6685 -1571 6 639 785 78 0 73 chrU 7171325 7171449 -2877588 - Gypsy6A_LTR LTR Gypsy -305 115 1 6 639 5586 280 41 32 chrU 7171452 7173489 -2875548 - Gypsy2_I LTR Gypsy -1 7011 4120 6 639 7011 88 43 61 chrU 7173760 7174935 -2874102 - PROTOP_B DNA P 0 1153 1 6 639 25 0 0 0 chrU 7175803 7175828 -2873209 + AT_rich Low_complexity Low_complexity 1 25 0 6 639 21 89 0 0 chrU 7176003 7176059 -2872978 + AT_rich Low_complexity Low_complexity 1 56 0 6 639 23 68 0 0 chrU 7176096 7176140 -2872897 + AT_rich Low_complexity Low_complexity 1 44 0 6 639 26 30 0 0 chrU 7176186 7176219 -2872818 + AT_rich Low_complexity Low_complexity 1 33 0 6 639 4127 167 73 27 chrU 7176406 7177040 -2871997 + TART LINE telomeric 4999 5644 -8833 6 639 180 111 0 0 chrU 7177040 7177067 -2871970 + (CAG)n Simple_repeat Simple_repeat 3 29 0 6 639 4127 167 73 27 chrU 7177067 7177277 -2871760 + TART LINE telomeric 5645 5882 -8595 6 639 5807 42 4 52 chrU 7177277 7179114 -2869923 + TART LINE telomeric 3317 4995 -9482 6 639 729 89 0 9 chrU 7179763 7179876 -2869161 - PROTOP_B DNA P -816 337 226 6 639 532 188 0 104 chrU 7180314 7180439 -2868598 + DNAREP1_DM LINE Penelope 8 119 -475 6 639 258 70 70 0 chrU 7180463 7180506 -2868531 + DNAREP1_DM LINE Penelope 195 240 -354 6 639 4671 33 42 2 chrU 7181350 7181922 -2867115 + PROTOP DNA P 1 595 -3885 6 639 262 306 36 36 chrU 7182024 7182248 -2866789 + DM176_I LTR Gypsy 1905 2128 -4292 6 639 1423 24 6 6 chrU 7182220 7182388 -2866649 - TLD3 Unknown Unknown -3 169 2 6 639 2665 279 8 20 chrU 7182366 7183230 -2865807 + ROVER-I_DM LTR Gypsy 2576 3429 -3155 6 639 3410 268 48 15 chrU 7183235 7184279 -2864758 + ROVER-I_DM LTR Gypsy 3036 4113 -2471 6 639 1983 97 42 16 chrU 7184298 7184611 -2864426 - MAX_LTR LTR Pao 0 321 1 6 639 833 61 9 0 chrU 7184611 7184725 -2864312 - MAX_I LTR Pao 0 7914 7800 6 639 12251 25 45 5 chrU 7184825 7186673 -2862364 - FW_DM LINE Jockey -2769 1923 1 6 639 2407 35 0 0 chrU 7186681 7186966 -2862071 + R1_DM LINE R1 1377 1661 -3695 6 639 4964 26 0 0 chrU 7186953 7187523 -2861514 + R1_DM LINE R1 1907 2476 -2880 6 639 420 249 104 111 chrU 7187626 7187906 -2861131 - Invader1_LTR LTR Gypsy -62 361 84 6 639 25 31 0 0 chrU 7188087 7188119 -2860918 + AT_rich Low_complexity Low_complexity 1 32 0 6 639 474 256 246 0 chrU 7188396 7188607 -2860430 - Copia_I LTR Copia -92 4501 4239 6 639 1946 307 107 36 chrU 7189013 7190305 -2858732 + NINJA_I LTR Pao 1027 2410 -3601 6 639 4522 196 27 31 chrU 7190420 7193117 -2855920 + SAR_DM Satellite Satellite 1 2685 -203 6 639 21 0 0 0 chrU 7194334 7194355 -2854682 + AT_rich Low_complexity Low_complexity 1 21 0 6 639 3613 58 118 116 chrU 7194456 7194781 -2854256 + ROO_I LTR Pao 258 640 -7616 6 639 372 138 0 0 chrU 7194781 7194846 -2854191 + (CAG)n Simple_repeat Simple_repeat 1 65 0 6 639 3613 55 132 130 chrU 7194846 7195316 -2853721 + ROO_I LTR Pao 641 1151 -7105 6 639 3149 99 7 7 chrU 7195404 7195860 -2853177 + TART LINE telomeric 6797 7252 -7225 6 639 4505 204 29 28 chrU 7196011 7198700 -2850337 - SAR_DM Satellite Satellite -451 2691 1 6 639 4389 187 19 44 chrU 7198800 7201470 -2847567 + SAR_DM Satellite Satellite 1 2604 -203 6 639 6139 164 38 53 chrU 7201610 7203374 -2845663 + TART LINE telomeric 6916 10052 -4425 6 639 5539 107 12 47 chrU 7203372 7204276 -2844761 + HETA LINE telomeric 3455 4327 -1754 6 639 1214 133 3 178 chrU 7204376 7204668 -2844369 + HOBO DNA hAT 33 273 -2743 6 639 1912 105 186 18 chrU 7204673 7205055 -2843982 + PROTOP_B DNA P 33 478 -675 6 639 4830 71 0 3 chrU 7205032 7205655 -2843382 + HOBO DNA hAT 330 950 -2066 6 639 578 64 13 0 chrU 7205656 7205734 -2843303 + HOBO DNA hAT 1100 1178 -1838 6 639 973 157 0 0 chrU 7205741 7205900 -2843137 + HOBO DNA hAT 1478 1636 -1380 6 639 493 203 39 71 chrU 7205908 7206062 -2842975 + HOBO DNA hAT 1753 1901 -1115 6 639 4264 121 84 95 chrU 7206069 7207008 -2842029 + HOBO DNA hAT 2088 3016 0 6 639 2654 26 10 0 chrU 7207162 7207471 -2841566 - ROOA_I LTR Pao -6537 312 1 6 639 940 52 0 0 chrU 7207471 7207587 -2841450 - ROOA_LTR LTR Pao 0 386 271 6 640 7178 88 32 2 chrU 7209933 7210059 -2838978 + R1_DM LINE R1 771 896 -4460 6 640 243 88 0 0 chrU 7210059 7210093 -2838944 + (CCG)n Simple_repeat Simple_repeat 1 34 0 6 640 7178 88 32 2 chrU 7210093 7210959 -2838078 + R1_DM LINE R1 897 1793 -3563 6 640 2082 156 25 40 chrU 7210960 7211362 -2837675 + R1_DM LINE R1 310 705 -4651 6 640 7805 86 55 8 chrU 7211362 7212456 -2836581 + R1_DM LINE R1 1099 2243 -3113 6 640 2640 102 31 20 chrU 7212704 7215374 -2833663 - DMSAT6 Satellite Satellite -34 2697 1 6 640 3813 12 0 2 chrU 7216036 7216467 -2832570 + Gypsy5_LTR LTR Gypsy 1 430 0 6 640 439 20 0 0 chrU 7216467 7216516 -2832521 + Gypsy5_I LTR Gypsy 1 49 -6460 6 640 22 0 0 0 chrU 7216813 7216835 -2832202 + AT_rich Low_complexity Low_complexity 1 22 0 6 640 5669 0 13 0 chrU 7217510 7218142 -2830895 + Gypsy5_I LTR Gypsy 48 687 -5822 6 640 6326 47 17 2 chrU 7218243 7219062 -2829975 + MDG1_I LTR Gypsy 5467 6297 -299 6 640 42 77 0 0 chrU 7219088 7219179 -2829858 + AT_rich Low_complexity Low_complexity 1 91 0 6 640 413 87 18 0 chrU 7219179 7219254 -2829783 + MDG1_I LTR Gypsy 6543 6596 0 6 640 453 92 0 0 chrU 7219259 7219335 -2829702 + (TAA)n Simple_repeat Simple_repeat 3 78 0 6 640 830 132 0 0 chrU 7219511 7219632 -2829405 - HMSBEAGLE_I LTR Gypsy 0 6529 6409 6 640 364 103 56 56 chrU 7219706 7219778 -2829259 - HMSBEAGLE_I LTR Gypsy -124 6405 6334 6 640 1538 209 64 42 chrU 7220012 7220421 -2828616 - HMSBEAGLE_I LTR Gypsy -161 6368 5951 6 640 19239 7 1 1 chrU 7221011 7223172 -2825865 + HETA LINE telomeric 3919 6078 -3 6 640 2340 196 39 2 chrU 7223158 7223674 -2825363 + HETA LINE telomeric 1236 1770 -4311 6 640 3212 180 149 2 chrU 7223785 7224852 -2824185 - IDEFIX_I LTR Gypsy -4040 1588 365 6 640 1822 67 21 3 chrU 7224852 7225136 -2823901 - TRANSIB1 DNA Transib 0 3014 2726 6 640 586 272 0 0 chrU 7225427 7225585 -2823452 - IDEFIX_I LTR Gypsy -5470 158 1 6 640 26 50 0 0 chrU 7225798 7225838 -2823199 + AT_rich Low_complexity Low_complexity 1 40 0 6 640 1307 92 4 95 chrU 7225981 7226234 -2822803 - IDEFIX_LTR LTR Gypsy -74 520 291 6 640 1362 72 156 4 chrU 7226203 7226440 -2822597 + TRANSIB2 DNA Transib 507 779 -2065 6 640 5768 70 142 2 chrU 7226540 7227954 -2821083 - IDEFIX_I LTR Gypsy -2639 2989 1377 6 640 2462 96 53 0 chrU 7227949 7228344 -2820693 - IDEFIX_I LTR Gypsy -4528 1100 685 6 640 5896 65 25 0 chrU 7228345 7229187 -2819850 - STALKER4_I LTR Gypsy -3192 3338 2476 6 640 3150 28 0 2 chrU 7229292 7229692 -2819345 + NINJA_I LTR Pao 5613 6011 0 6 640 2431 32 0 28 chrU 7229692 7230015 -2819022 + NINJA_LTR LTR Pao 1 314 -3 6 640 226 239 14 28 chrU 7230836 7230978 -2818059 + CT-rich Low_complexity Low_complexity 1 140 0 6 640 806 321 37 35 chrU 7231170 7231929 -2817108 - MICROPIA_I LTR Gypsy -582 3894 3163 6 640 3083 296 6 12 chrU 7232033 7233093 -2815944 + Gypsy6_I LTR Gypsy 5959 7011 -1 6 640 1701 111 16 60 chrU 7233096 7233412 -2815625 + Gypsy6A_LTR LTR Gypsy 1 302 -118 6 640 312 155 40 40 chrU 7233460 7233534 -2815503 + HETA LINE telomeric 5629 5702 -379 6 640 327 188 0 0 chrU 7233576 7233640 -2815397 - STALKER4_LTR LTR Gypsy -28 374 311 6 640 4134 91 59 21 chrU 7233655 7234318 -2814719 + Gypsy12_I LTR Gypsy 896 1583 -3963 6 640 2368 107 3 8 chrU 7234318 7234678 -2814359 + Gypsy12_I LTR Gypsy 2248 2605 -2941 6 640 254 303 0 0 chrU 7235825 7235891 -2813146 - DIVER2_I LTR Pao -165 3982 3917 6 640 322 309 78 11 chrU 7236179 7236359 -2812678 - DIVER2_I LTR Pao -524 3623 3432 6 640 246 243 14 0 chrU 7236362 7236432 -2812605 - DIVER2_I LTR Pao -1019 3128 3058 6 640 2041 299 8 6 chrU 7236470 7237179 -2811858 + BS LINE Jockey 2023 2733 -2393 6 640 283 415 0 0 chrU 7237200 7237419 -2811618 + BS LINE Jockey 2867 3085 -2041 6 640 1990 122 123 28 chrU 7237522 7238096 -2810941 - Gypsy12_I LTR Gypsy -4854 692 7 6 640 1587 200 106 30 chrU 7238122 7238652 -2810385 - Gypsy12_LTR LTR Gypsy -695 1641 1072 6 640 1666 109 30 26 chrU 7238672 7238974 -2810063 - Gypsy12_LTR LTR Gypsy -187 2149 1847 6 640 2842 238 32 70 chrU 7238982 7240059 -2808978 - Gypsy12_LTR LTR Gypsy -1300 1036 1 6 640 337 262 0 0 chrU 7240059 7240156 -2808881 - DM297_I LTR Gypsy -2709 3458 3362 6 640 4170 196 18 26 chrU 7240264 7242905 -2806132 - SAR_DM Satellite Satellite -865 2620 1 6 640 5747 95 83 60 chrU 7243826 7244952 -2804085 + PROTOP_B DNA P 1 1153 0 6 640 26 30 0 0 chrU 7245329 7245362 -2803675 + AT_rich Low_complexity Low_complexity 1 33 0 6 640 21 89 0 0 chrU 7245481 7245537 -2803500 + AT_rich Low_complexity Low_complexity 1 56 0 6 640 786 54 9 0 chrU 7245747 7245858 -2803179 + ARS406_DM Unknown Unknown 78 189 -164 6 640 4181 208 23 31 chrU 7245761 7251091 -2797946 - SAR_DM Satellite Satellite -208 5287 1 6 640 681 123 0 0 chrU 7250998 7251120 -2797917 + ARS406_DM Unknown Unknown 1 122 -231 6 640 9693 2 0 1 chrU 7251220 7252361 -2796676 + MAX_I LTR Pao 6775 7914 0 6 640 2765 6 0 0 chrU 7252361 7252682 -2796355 + MAX_LTR LTR Pao 1 321 0 6 640 419 287 55 5 chrU 7252780 7252997 -2796040 + TV1I LTR Gypsy 3677 3904 -2059 6 640 1374 151 88 23 chrU 7253018 7253366 -2795671 + DNAREP1_DM LINE Penelope 115 441 -153 6 640 20907 24 25 5 chrU 7253956 7256591 -2792446 + R1_DM LINE R1 2563 5251 -105 6 640 1138 43 21 16 chrU 7256691 7256879 -2792158 + MDG1_I LTR Gypsy 6108 6296 -300 6 640 699 75 17 0 chrU 7256879 7256999 -2792038 + MDG1_I LTR Gypsy 6475 6596 0 6 640 372 88 0 0 chrU 7257015 7257072 -2791965 + (TAA)n Simple_repeat Simple_repeat 3 59 0 6 640 1865 106 10 3 chrU 7257084 7257377 -2791660 + MDG1_LTR LTR Gypsy 123 417 -25 6 640 2278 62 3 81 chrU 7257391 7257776 -2791261 + DMHMR2 Unknown Unknown 3 357 -855 6 640 1305 92 0 0 chrU 7257776 7257972 -2791065 + HETA LINE telomeric 2067 2262 -3819 6 640 1006 81 0 20 chrU 7257986 7258138 -2790899 - HETA LINE telomeric -552 5529 5381 6 640 1054 120 6 0 chrU 7258224 7258399 -2790638 - HETA LINE telomeric -2894 3187 3012 6 640 893 129 0 24 chrU 7258399 7258566 -2790471 + DIVER_LTR LTR Pao 1 163 -61 6 640 5104 50 5 0 chrU 7258667 7259322 -2789715 + DIVER_I LTR Pao 1 658 -4985 6 640 8700 91 74 42 chrU 7259422 7260881 -2788156 - ACCORD2_I LTR Gypsy -5188 2024 520 6 640 3153 18 0 36 chrU 7260880 7261293 -2787744 - ACCORD2_I LTR Gypsy -6814 398 1 6 640 1459 16 138 0 chrU 7261293 7261482 -2787555 - ACCORD2_LTR LTR Gypsy 0 215 1 6 640 8659 35 28 0 chrU 7262151 7263265 -2785772 - IDEFIX_I LTR Gypsy -2879 2749 1605 6 640 1336 40 0 0 chrU 7263265 7263442 -2785595 - IDEFIX_I LTR Gypsy -5347 281 105 6 640 287 0 0 0 chrU 7263583 7263616 -2785421 - IDEFIX_I LTR Gypsy -5595 33 1 6 640 25 0 0 0 chrU 7263917 7263942 -2785095 + AT_rich Low_complexity Low_complexity 1 25 0 6 640 2961 30 171 4 chrU 7264134 7264643 -2784394 - IDEFIX_LTR LTR Gypsy 0 594 1 6 640 18849 109 14 5 chrU 7264879 7267505 -2781532 + STALKER4_I LTR Gypsy 1950 4599 -1931 6 640 21947 11 22 0 chrU 7267605 7270225 -2778812 - Copia2_I LTR Copia -705 3457 779 6 640 3652 208 28 15 chrU 7270325 7272941 -2776096 + SAR_DM Satellite Satellite 1 2647 -208 6 640 2242 18 0 0 chrU 7273530 7273808 -2775229 + PROTOP_A DNA P 183 460 -645 6 640 253 279 0 0 chrU 7274925 7275004 -2774033 - Gypsy7_I LTR Gypsy -4060 924 846 6 640 2264 20 10 0 chrU 7275359 7275660 -2773377 + TC1-2_DM DNA Tc1 1313 1616 -28 6 640 2165 42 3 11 chrU 7275820 7276107 -2772930 - NINJA_LTR LTR Pao -1 316 32 6 640 18018 23 37 0 chrU 7276108 7278377 -2770660 - NINJA_I LTR Pao -2615 3396 1040 6 640 3189 207 40 16 chrU 7278485 7280386 -2768651 + SAR_DM Satellite Satellite 1 1946 -203 6 640 667 145 15 0 chrU 7280385 7280516 -2768521 - ARS406_DM Unknown Unknown -220 133 1 6 640 2311 212 43 5 chrU 7280415 7281089 -2767948 + SAR_DM Satellite Satellite 185 884 -588 6 640 6742 60 19 22 chrU 7281189 7282210 -2766827 + DM297_I LTR Gypsy 3289 4305 -1862 6 640 1987 46 0 0 chrU 7282203 7282462 -2766575 + DM297_I LTR Gypsy 5124 5382 -785 6 640 1632 65 4 0 chrU 7282473 7282721 -2766316 + DM297_I LTR Gypsy 5576 5824 -343 6 640 706 126 67 0 chrU 7283621 7283740 -2765297 - DNAREP1_DM LINE Penelope -130 464 338 6 640 308 26 0 0 chrU 7283762 7283800 -2765237 + FW_DM LINE Jockey 5 42 -4650 6 640 2635 123 4 11 chrU 7283902 7284355 -2764682 + TART LINE telomeric 10006 10455 -8 6 640 552 13 0 0 chrU 7284355 7284433 -2764604 + TART LINE telomeric 7961 8038 -6439 6 640 1113 62 8 13 chrU 7284414 7284609 -2764428 + TART LINE telomeric 10289 10673 -3804 6 640 16325 14 3 0 chrU 7284576 7286507 -2762530 + TART LINE telomeric 3889 5824 -8653 6 640 4045 200 14 19 chrU 7286607 7289190 -2759847 - SAR_DM Satellite Satellite -447 2569 1 6 640 412 99 0 14 chrU 7289138 7289210 -2759827 + ARS406_DM Unknown Unknown 1 71 -282 6 640 478 226 7 22 chrU 7289431 7289567 -2759470 - HETRP_DM Satellite Satellite -190 1682 1549 6 640 264 30 0 0 chrU 7289567 7289600 -2759437 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 640 489 226 7 22 chrU 7289744 7289880 -2759157 - HETRP_DM Satellite Satellite -190 1682 1549 6 640 246 32 0 0 chrU 7289880 7289911 -2759126 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 640 527 211 7 22 chrU 7290055 7290191 -2758846 - HETRP_DM Satellite Satellite -190 1682 1549 6 640 246 32 0 0 chrU 7290191 7290222 -2758815 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 640 506 225 70 0 chrU 7290381 7290523 -2758514 - HETRP_DM Satellite Satellite -203 1669 1518 6 640 300 216 97 10 chrU 7290657 7290760 -2758277 + DNAREP1_DM LINE Penelope 67 178 -416 6 640 1108 167 88 75 chrU 7290995 7291357 -2757680 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 640 779 72 24 8 chrU 7291423 7291549 -2757488 + STALKER4_I LTR Gypsy 758 885 -5645 6 640 573 149 16 8 chrU 7292015 7292137 -2756900 - SAR_DM Satellite Satellite -823 649 527 6 640 1095 167 29 11 chrU 7292185 7292944 -2756093 - SAR_DM Satellite Satellite -683 773 1 6 640 1035 178 31 16 chrU 7292955 7293459 -2755578 - SAR_DM Satellite Satellite -683 511 1 6 640 1015 183 26 12 chrU 7293470 7294489 -2754548 - SAR_DM Satellite Satellite -683 1033 1 6 640 347 162 50 20 chrU 7294500 7294601 -2754436 - SAR_DM Satellite Satellite -1043 429 326 6 640 2652 9 0 3 chrU 7294718 7295044 -2753993 + MICROPIA_I LTR Gypsy 4152 4476 0 6 640 3823 15 0 61 chrU 7295044 7295551 -2753486 + MICROPIA_LTR LTR Gypsy 1 476 0 6 640 3450 42 95 17 chrU 7296476 7297316 -2751721 + DIVER2_I LTR Pao 2417 3322 -825 6 640 502 180 9 0 chrU 7297418 7297529 -2751508 - SAR_DM Satellite Satellite -398 1074 963 6 640 375 204 9 18 chrU 7297519 7297629 -2751408 + XDMR_DM Unknown Unknown 252 360 0 6 640 4201 187 22 23 chrU 7297543 7300007 -2749030 - SAR_DM Satellite Satellite -353 2462 1 6 640 10224 31 110 34 chrU 7300107 7301609 -2747428 - NINJA_I LTR Pao -4395 1616 1 6 640 2351 38 6 28 chrU 7301609 7301933 -2747104 - NINJA_LTR LTR Pao 0 317 1 6 640 3355 15 0 0 chrU 7301937 7302330 -2746707 + Invader6_LTR LTR Gypsy 1 393 0 6 640 3041 8 3 16 chrU 7302330 7302695 -2746342 + Invader6_I LTR Gypsy 1 360 -3739 6 640 3783 41 201 12 chrU 7302795 7303424 -2745613 - PROTOP DNA P -3732 748 1 6 640 310 89 0 0 chrU 7303427 7303472 -2745565 + DMRT1B LINE R1 5125 5169 -14 6 640 1400 149 35 0 chrU 7303670 7303931 -2745106 + Invader3_I LTR Gypsy 4491 4760 -128 6 640 949 161 377 0 chrU 7303959 7304343 -2744694 - Invader3_I LTR Gypsy -961 3927 3399 6 640 1752 138 0 0 chrU 7304370 7304659 -2744378 - Invader3_I LTR Gypsy -2059 2829 2541 6 640 1399 232 120 2 chrU 7304657 7305106 -2743931 - Invader3_I LTR Gypsy -2681 2207 1706 6 640 640 78 47 37 chrU 7305106 7305213 -2743824 - PROTOP_B DNA P 0 1153 1046 6 640 229 94 0 0 chrU 7305214 7305246 -2743791 - Invader3_I LTR Gypsy -3417 1471 1440 6 640 804 143 0 0 chrU 7305250 7305376 -2743661 - Invader3_I LTR Gypsy -4043 845 720 6 640 2228 284 16 18 chrU 7305479 7306331 -2742706 - ROVER-I_DM LTR Gypsy -4852 1732 882 6 640 940 167 147 11 chrU 7306470 7306736 -2742301 - ROVER-I_DM LTR Gypsy -6282 302 1 6 640 1053 175 96 85 chrU 7306736 7307099 -2741938 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 640 1971 99 41 28 chrU 7307103 7307465 -2741572 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 640 251 321 7 42 chrU 7307498 7307641 -2741396 - T412LTR LTR LTR -258 223 86 6 640 237 246 22 80 chrU 7307530 7307667 -2741370 - Gypsy11_LTR LTR Gypsy -243 209 81 6 640 342 109 0 0 chrU 7307703 7307758 -2741279 - DM412 LTR Gypsy -101 6796 6742 6 640 276 53 0 0 chrU 7307853 7307891 -2741146 + (TTA)n Simple_repeat Simple_repeat 3 40 0 6 640 366 252 0 8 chrU 7307934 7308058 -2740979 - DM412 LTR Gypsy -324 6573 6451 6 640 1551 123 115 0 chrU 7308196 7308562 -2740475 - STALKER4_I LTR Gypsy -171 6359 5952 6 640 7413 43 14 3 chrU 7308560 7309535 -2739502 - STALKER4_I LTR Gypsy -1385 5145 4160 6 640 7177 43 42 6 chrU 7309530 7310488 -2738549 - R1_DM LINE R1 -1671 3685 2694 6 640 1608 57 146 35 chrU 7310489 7310743 -2738294 - R2_DM LINE R2 -1537 2070 1789 6 640 2196 56 15 36 chrU 7310913 7311249 -2737788 + DMCR1A LINE CR1 71 399 -4071 6 640 6472 54 77 0 chrU 7311244 7312149 -2736888 + DMCR1A LINE CR1 667 1641 -2829 6 640 400 57 0 0 chrU 7312285 7312338 -2736699 + G3_DM LINE Jockey 41 93 -4512 6 640 894 153 0 0 chrU 7312383 7312533 -2736504 + G3_DM LINE Jockey 428 577 -4028 6 640 375 354 17 4 chrU 7312575 7312816 -2736221 + DIVER2_I LTR Pao 1558 1801 -2346 6 640 2360 102 24 43 chrU 7313520 7316096 -2732941 - DMSAT6 Satellite Satellite -56 2527 1 6 640 432 185 0 0 chrU 7316200 7316308 -2732729 + (AATAG)n Simple_repeat Simple_repeat 2 109 0 6 640 2663 34 63 0 chrU 7316312 7316460 -2732577 - Stalker3_LTR LTR Gypsy 0 372 225 6 640 207 0 0 0 chrU 7316460 7316483 -2732554 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 6 640 2663 34 63 0 chrU 7316483 7316684 -2732353 - Stalker3_LTR LTR Gypsy -148 224 2 6 640 337 72 6 25 chrU 7316684 7316769 -2732268 - STALKER4_I LTR Gypsy 0 6530 6491 6 640 208 135 0 0 chrU 7316769 7316806 -2732231 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 6 640 21 57 0 0 chrU 7316899 7316934 -2732103 + AT_rich Low_complexity Low_complexity 1 35 0 6 640 5672 248 4 8 chrU 7317092 7318773 -2730264 - DM412 LTR Gypsy -322 6575 4901 6 640 2796 61 11 19 chrU 7318873 7319290 -2729747 + STALKER4_LTR LTR Gypsy 21 399 -3 6 640 22 35 0 0 chrU 7319751 7319780 -2729257 + AT_rich Low_complexity Low_complexity 1 29 0 6 640 912 167 111 54 chrU 7319807 7320086 -2728951 - Gypsy5_LTR LTR Gypsy -135 295 1 6 640 6687 165 41 7 chrU 7320086 7321441 -2727596 - Gypsy5_I LTR Gypsy 0 6509 5109 6 640 4001 31 0 0 chrU 7321548 7322037 -2727000 + R1_DM LINE R1 4345 4833 -523 6 640 2744 14 66 0 chrU 7322055 7322402 -2726635 - Stalker3_LTR LTR Gypsy -2 370 1 6 640 337 39 0 24 chrU 7322402 7322471 -2726566 - STALKER4_I LTR Gypsy 0 6530 6491 6 640 43 47 0 0 chrU 7322498 7322562 -2726475 + AT_rich Low_complexity Low_complexity 1 64 0 6 640 3987 254 6 7 chrU 7322847 7324121 -2724916 - DM412 LTR Gypsy -322 6575 5303 6 640 1518 40 0 29 chrU 7324223 7324429 -2724608 - BATUMI_LTR LTR Pao -41 231 32 6 640 1193 26 0 0 chrU 7324475 7324628 -2724409 - IDEFIX_LTR LTR Gypsy -441 153 1 6 640 3716 91 20 2 chrU 7324628 7325225 -2723812 - IDEFIX_I LTR Gypsy 0 5628 5021 6 640 1631 52 4 30 chrU 7325730 7325967 -2723070 + BATUMI_LTR LTR Pao 42 272 0 6 640 1290 38 0 0 chrU 7325967 7326126 -2722911 + BATUMI_I LTR Pao 1 159 -7804 6 640 46 0 0 0 chrU 7326264 7326310 -2722727 + AT_rich Low_complexity Low_complexity 1 46 0 6 640 429 70 0 0 chrU 7326741 7326798 -2722239 + IDEFIX_I LTR Gypsy 1666 1722 -3906 6 640 15165 18 9 0 chrU 7326898 7328741 -2720296 + FW_DM LINE Jockey 2833 4692 0 6 640 5530 29 42 1 chrU 7328740 7329438 -2719599 + CIRCE LINE Composite 2760 3485 -2871 6 640 1279 31 0 0 chrU 7329573 7329736 -2719301 - IDEFIX_LTR LTR Gypsy -431 163 1 6 640 252 122 0 0 chrU 7329704 7329745 -2719292 + BARI1 DNA Tc1 3 43 -1707 6 640 21 0 0 0 chrU 7329823 7329844 -2719193 + AT_rich Low_complexity Low_complexity 1 21 0 6 640 1040 159 304 33 chrU 7329844 7330177 -2718860 + Invader1_LTR LTR Gypsy 1 423 0 6 640 251 271 36 36 chrU 7330177 7330288 -2718749 + Invader6_I LTR Gypsy 1 111 -4365 6 640 1688 306 57 31 chrU 7330395 7331700 -2717337 + Invader6_I LTR Gypsy 955 2347 -1752 6 640 250 258 0 0 chrU 7331714 7331780 -2717257 + Invader6_I LTR Gypsy 3163 3228 -871 6 640 275 313 29 44 chrU 7331844 7332048 -2716989 + Invader6_I LTR Gypsy 3447 3611 -488 6 640 5404 5 8 0 chrU 7332247 7332896 -2716141 - STALKER4_I LTR Gypsy -402 6128 5475 6 640 234 81 27 0 chrU 7332896 7332933 -2716104 + PROTOP_B DNA P 509 546 -607 6 640 274 53 0 0 chrU 7332923 7332961 -2716076 - STALKER4_I LTR Gypsy -1046 5484 5447 6 640 7339 64 22 18 chrU 7332959 7334528 -2714509 - STALKER4_I LTR Gypsy -1385 5512 3665 6 640 2318 28 0 0 chrU 7334527 7334817 -2714220 - STALKER4_I LTR Gypsy -3430 3100 2811 6 640 423 75 185 12 chrU 7334917 7334998 -2714039 + DMCR1A LINE CR1 3262 3356 -1114 6 640 6660 28 1 1 chrU 7335388 7336224 -2712813 + G2_DM LINE Jockey 2236 3071 -31 6 640 25 90 0 0 chrU 7336259 7336326 -2712711 + AT_rich Low_complexity Low_complexity 1 67 0 6 640 508 194 242 0 chrU 7336326 7336474 -2712563 + TIRANT_I LTR Gypsy 3785 3940 -3752 6 640 21 71 0 0 chrU 7336928 7336970 -2712067 + AT_rich Low_complexity Low_complexity 1 42 0 6 640 25 31 0 0 chrU 7337092 7337124 -2711913 + AT_rich Low_complexity Low_complexity 1 32 0 6 640 600 322 7 7 chrU 7337584 7337872 -2711165 - Invader5_I LTR Gypsy -1796 1538 1251 6 640 767 280 0 0 chrU 7337874 7338092 -2710945 - Invader6_I LTR Gypsy -2189 1910 1693 6 640 710 370 56 43 chrU 7338100 7339702 -2709335 - MICROPIA_I LTR Gypsy -2854 1622 1 6 9 242 0 0 159 chrU 7339832 7340140 -2708897 + (CAAGA)n Simple_repeat Simple_repeat 1 258 0 6 641 834 258 20 16 chrU 7340243 7340546 -2708491 - XDMR_DM Unknown Unknown -51 309 6 6 641 4163 194 24 27 chrU 7340279 7342262 -2706775 + SAR_DM Satellite Satellite 1 1977 -208 6 641 1815 180 5 7 chrU 7342277 7342686 -2706351 + SAR_DM Satellite Satellite 496 903 -569 6 641 709 65 9 0 chrU 7342693 7342800 -2706237 - ARS406_DM Unknown Unknown -195 158 51 6 641 3579 210 29 14 chrU 7342900 7345452 -2703585 + SAR_DM Satellite Satellite 1 2590 -208 6 641 1067 102 96 19 chrU 7345556 7345844 -2703193 + ZAM_I LTR Gypsy 3 501 -6989 6 641 1990 20 16 4 chrU 7345845 7346099 -2702938 - DM176_LTR LTR Gypsy 0 507 251 6 641 2198 11 0 78 chrU 7346100 7346407 -2702630 - DM176_LTR LTR Gypsy -224 283 1 6 641 12097 50 42 8 chrU 7346408 7348111 -2700926 + ZAM_I LTR Gypsy 800 2560 -4930 6 641 1231 73 54 33 chrU 7348225 7348467 -2700570 + BATUMI_I LTR Pao 593 839 -7124 6 641 5062 38 100 32 chrU 7348466 7349207 -2699830 + BATUMI_I LTR Pao 990 1780 -6183 6 641 1079 16 0 0 chrU 7349208 7349333 -2699704 - PROTOP DNA P 0 4480 4356 6 641 608 40 0 0 chrU 7349630 7349730 -2699307 - PROTOP DNA P -307 4173 4074 6 641 5824 17 21 0 chrU 7349746 7350466 -2698571 - PROTOP DNA P -2679 1801 1067 6 641 1176 46 27 6 chrU 7350464 7350764 -2698273 - PROTOP DNA P -3644 836 453 6 641 1405 278 37 49 chrU 7350866 7351494 -2697543 + MAX_I LTR Pao 6493 7112 -802 6 641 3067 64 7 14 chrU 7351063 7351505 -2697532 - BATUMI_I LTR Pao -962 7001 6563 6 641 4239 68 39 5 chrU 7351491 7352113 -2696924 + BATUMI_I LTR Pao 7321 7963 0 6 641 1623 50 4 44 chrU 7352135 7352386 -2696651 + BATUMI_LTR LTR Pao 32 272 0 6 641 236 265 0 19 chrU 7353581 7353685 -2695352 - ACCORD2_I LTR Gypsy -1502 5710 5609 6 641 225 261 17 9 chrU 7353972 7354088 -2694949 + T-rich Low_complexity Low_complexity 4 120 0 6 641 684 136 0 0 chrU 7354777 7354887 -2694150 - Invader2_I LTR Gypsy -3969 623 514 6 641 1631 152 95 8 chrU 7355042 7355420 -2693617 - Invader2_I LTR Gypsy -4146 446 36 6 641 603 247 36 7 chrU 7355524 7355925 -2693112 - IDEFIX_I LTR Gypsy -4510 1118 676 6 641 3220 122 26 31 chrU 7356168 7356817 -2692220 - TART LINE telomeric -4374 10103 9458 6 641 8787 166 13 37 chrU 7356815 7358711 -2690326 - HETA LINE telomeric -1906 4175 2326 6 641 584 116 164 14 chrU 7359290 7359430 -2689607 + DNAREP1_DM LINE Penelope 226 386 -208 6 641 1648 83 104 11 chrU 7359433 7359712 -2689325 + DNAREP1_DM LINE Penelope 290 594 0 6 641 21 0 0 0 chrU 7360678 7360699 -2688338 + AT_rich Low_complexity Low_complexity 1 21 0 6 641 1920 38 0 0 chrU 7361452 7361688 -2687349 - BATUMI_I LTR Pao -1935 6028 5793 6 641 1700 43 0 0 chrU 7361685 7361896 -2687141 - BATUMI_I LTR Pao -2355 5608 5398 6 641 9040 114 23 8 chrU 7361894 7363993 -2685044 - BATUMI_I LTR Pao -2804 5159 3138 6 641 2446 92 36 40 chrU 7364095 7366620 -2682417 + DMSAT6 Satellite Satellite 1 2514 -85 6 641 1022 57 7 0 chrU 7366729 7366869 -2682168 - R1_DM LINE R1 -5215 141 1 6 641 8115 21 60 1 chrU 7366902 7368159 -2680878 - R1_DM LINE R1 0 5356 4026 6 641 8674 24 38 5 chrU 7368169 7369259 -2679778 - R1_DM LINE R1 -1690 3666 2541 6 641 2588 102 23 23 chrU 7369361 7371884 -2677153 - DMSAT6 Satellite Satellite -36 2521 1 6 641 12273 127 48 9 chrU 7371988 7374517 -2674520 + Gypsy2_I LTR Gypsy 145 2835 -4177 6 641 384 234 8 15 chrU 7374617 7374747 -2674290 - IDEFIX_I LTR Gypsy -3965 1663 1535 6 641 321 321 0 18 chrU 7375089 7375260 -2673777 - QUASIMODO_I LTR Gypsy -4599 1461 1294 6 641 4993 176 11 6 chrU 7375467 7376508 -2672529 + DM412 LTR Gypsy 5197 6243 -654 6 641 747 238 143 29 chrU 7376499 7377047 -2671990 - QUASIMODO_I LTR Gypsy -1136 4924 3918 6 641 516 203 233 0 chrU 7377523 7377656 -2671381 - TIRANT_I LTR Gypsy -3752 3940 3777 6 641 1421 80 71 0 chrU 7378157 7378396 -2670641 - DMCR1A LINE CR1 -91 4379 4124 6 641 588 79 11 11 chrU 7378385 7378475 -2670562 - DMCR1A LINE CR1 -761 3709 3620 6 641 248 250 0 0 chrU 7378474 7378538 -2670499 - HMSBEAGLE_I LTR Gypsy -3032 3497 3434 6 641 25 31 0 0 chrU 7379652 7379684 -2669353 + AT_rich Low_complexity Low_complexity 1 32 0 6 641 3183 5 52 0 chrU 7379868 7380255 -2668782 - Copia_I LTR Copia -4186 407 1 6 641 2137 11 4 7 chrU 7380255 7380532 -2668505 - Copia_LTR LTR Copia 0 276 1 6 641 3075 69 76 31 chrU 7380532 7381223 -2667814 + PROTOP_A DNA P 445 1111 -42 6 641 8727 15 31 2 chrU 7381223 7382343 -2666694 + PROTOP_A DNA P 1 1153 0 6 641 5006 16 31 2 chrU 7382489 7383132 -2665905 - STALKER4_I LTR Gypsy -2688 3842 3181 6 641 1755 104 16 57 chrU 7383183 7383498 -2665539 - Gypsy6A_LTR LTR Gypsy -118 302 1 6 641 1850 272 2 4 chrU 7383918 7384445 -2664592 - Gypsy2_I LTR Gypsy -516 5619 5094 6 641 1530 237 48 63 chrU 7384488 7385010 -2664027 - Gypsy2_I LTR Gypsy -1449 4686 4173 6 641 3948 204 21 25 chrU 7385113 7387608 -2661429 + SAR_DM Satellite Satellite 1 2483 -216 6 641 264 208 0 13 chrU 7387550 7387628 -2661409 - XDMR_DM Unknown Unknown 0 360 284 6 641 3689 11 0 0 chrU 7387730 7388167 -2660870 - MDG3_I LTR Gypsy -4549 437 1 6 641 2256 23 8 0 chrU 7388166 7388431 -2660606 - MDG3_LTR LTR Gypsy 0 267 1 6 641 311 0 0 25 chrU 7388811 7388851 -2660186 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 6 641 2063 47 141 0 chrU 7389174 7389629 -2659408 - DMCR1A LINE CR1 -1 4469 3951 6 641 5253 36 29 0 chrU 7389619 7390250 -2658787 - DMCR1A LINE CR1 -940 3530 2882 6 641 665 24 0 0 chrU 7390352 7390436 -2658601 + Copia2_I LTR Copia 4079 4162 0 6 641 3837 15 37 63 chrU 7390464 7390953 -2658084 + MICROPIA_LTR LTR Gypsy 1 476 0 6 641 5689 14 5 2 chrU 7390953 7391586 -2657451 + MICROPIA_I LTR Gypsy 1 635 -3841 6 641 9581 60 5 8 chrU 7391575 7392847 -2656190 + MICROPIA_I LTR Gypsy 742 2025 -2074 6 641 2669 114 14 41 chrU 7392967 7395483 -2653554 + DMSAT6 Satellite Satellite 1 2449 -152 6 641 7907 21 1 4 chrU 7395583 7396517 -2652520 - PROTOP_A DNA P -174 931 1 6 641 21 0 0 0 chrU 7396767 7396788 -2652249 + AT_rich Low_complexity Low_complexity 1 21 0 6 641 3530 54 117 120 chrU 7396889 7397219 -2651818 + ROO_I LTR Pao 258 640 -7616 6 641 366 129 0 0 chrU 7397219 7397281 -2651756 + (CAG)n Simple_repeat Simple_repeat 1 62 0 6 641 3530 53 134 133 chrU 7397281 7397747 -2651290 + ROO_I LTR Pao 641 1145 -7111 6 641 4428 0 0 4 chrU 7398194 7398677 -2650360 + QUASIMODO_LTR LTR Gypsy 178 658 0 6 641 22 0 0 0 chrU 7398677 7398699 -2650338 + AT_rich Low_complexity Low_complexity 1 22 0 6 641 43 38 0 36 chrU 7398789 7398872 -2650165 + AT_rich Low_complexity Low_complexity 1 80 0 6 641 15745 11 5 1 chrU 7398945 7399149 -2649888 + SSU-rRNA_Dme rRNA rRNA 1 204 -1791 6 641 243 0 0 0 chrU 7399149 7399176 -2649861 + (TTA)n Simple_repeat Simple_repeat 1 27 0 6 641 15745 11 5 1 chrU 7399176 7400705 -2648332 + SSU-rRNA_Dme rRNA rRNA 205 1739 -256 6 641 2763 100 15 34 chrU 7400805 7403315 -2645722 - DMSAT6 Satellite Satellite -183 2461 1 6 641 979 38 53 0 chrU 7403900 7404030 -2645007 - PROTOP DNA P -1246 3234 3098 6 641 2810 42 0 3 chrU 7404030 7404367 -2644670 + DM1731_LTR LTR Copia 1 336 0 6 641 3372 73 58 0 chrU 7404367 7404827 -2644210 - PROTOP DNA P -1378 3102 2616 6 641 939 160 48 32 chrU 7405029 7405216 -2643821 - ACCORD2_LTR LTR Gypsy 0 215 26 6 641 478 0 0 0 chrU 7405217 7405268 -2643769 - ACCORD2_I LTR Gypsy -6856 356 306 6 641 913 104 18 89 chrU 7405265 7405434 -2643603 - ACCORD2_I LTR Gypsy -7055 157 1 6 641 950 156 17 121 chrU 7405434 7405674 -2643363 - ACCORD2_LTR LTR Gypsy 0 215 1 6 641 726 32 54 0 chrU 7406025 7406118 -2642919 - ARS406_DM Unknown Unknown -164 189 92 6 641 898 93 0 7 chrU 7406119 7406260 -2642777 - ARS406_DM Unknown Unknown -197 156 17 6 641 1021 246 23 16 chrU 7406259 7406565 -2642472 - XDMR_DM Unknown Unknown -47 313 6 6 641 4518 212 21 30 chrU 7406300 7408271 -2640766 + SAR_DM Satellite Satellite 1 1954 -196 6 641 1896 27 0 0 chrU 7408304 7408528 -2640509 + DOC LINE Jockey 24 247 -4478 6 641 4092 195 49 23 chrU 7408628 7411128 -2637909 - SAR_DM Satellite Satellite -435 2564 1 6 641 2506 78 63 14 chrU 7411228 7411656 -2637381 - TART LINE telomeric -4557 9920 9472 6 641 1255 306 48 48 chrU 7413875 7414934 -2634103 - BLOOD_I LTR Gypsy -4099 2514 1456 6 641 23 0 0 0 chrU 7415008 7415031 -2634006 + AT_rich Low_complexity Low_complexity 1 23 0 6 641 3515 151 29 20 chrU 7415145 7415801 -2633236 - Stalker2_I LTR Gypsy -6499 903 242 6 641 264 87 87 0 chrU 7415994 7416040 -2632997 - Stalker2_I LTR Gypsy -7352 50 1 6 641 1936 21 90 8 chrU 7416040 7416190 -2632847 - Stalker3_LTR LTR Gypsy 0 372 225 6 641 207 0 0 0 chrU 7416190 7416213 -2632824 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 6 641 1936 21 90 8 chrU 7416213 7416306 -2632731 - Stalker3_LTR LTR Gypsy -148 224 110 6 641 3105 190 29 16 chrU 7416408 7418882 -2630155 - SAR_DM Satellite Satellite -262 2505 1 6 641 16776 78 12 26 chrU 7418985 7421464 -2627573 - BATUMI_I LTR Pao -3166 4748 2227 6 641 4128 97 50 96 chrU 7421564 7422270 -2626767 + Gypsy12_I LTR Gypsy 1149 1821 -3725 6 641 2729 84 70 0 chrU 7422267 7422638 -2626399 + Gypsy12_I LTR Gypsy 4465 4861 -685 6 641 578 55 0 0 chrU 7422893 7422966 -2626071 + Gypsy12_I LTR Gypsy 5474 5546 0 6 641 2786 240 80 66 chrU 7422965 7424037 -2625000 + Gypsy12_LTR LTR Gypsy 1 1087 -1249 6 641 3131 247 250 77 chrU 7424141 7426449 -2622588 - ROVER-I_DM LTR Gypsy -3877 2707 1 6 641 489 161 71 77 chrU 7426449 7426617 -2622420 - ROVER-LTR_DM LTR Gypsy 0 367 201 6 641 17619 157 8 9 chrU 7426717 7429192 -2619845 + R1_DM LINE R1 220 2690 -2666 6 641 2885 9 3 0 chrU 7429292 7429609 -2619428 - MAX_I LTR Pao -7596 318 1 6 641 2957 6 0 0 chrU 7429609 7429930 -2619107 - MAX_LTR LTR Pao 0 321 1 6 641 4200 197 37 42 chrU 7429922 7431766 -2617271 - SAR_DM Satellite Satellite -215 1834 1 6 641 4664 193 74 66 chrU 7431877 7433256 -2615781 + Gypsy12_LTR LTR Gypsy 900 2289 -47 6 641 462 56 54 27 chrU 7433257 7433331 -2615706 + Gypsy12_I LTR Gypsy 7 82 -5464 6 641 963 72 31 68 chrU 7433331 7433494 -2615543 + Gypsy12_I LTR Gypsy 27 183 -5363 6 641 1673 130 0 64 chrU 7433503 7433816 -2615221 + Gypsy12_I LTR Gypsy 311 603 -4943 6 641 3841 88 9 15 chrU 7433812 7434340 -2614697 + Gypsy12_I LTR Gypsy 894 1418 -4128 6 641 2574 114 21 37 chrU 7434440 7436909 -2612128 - DMSAT6 Satellite Satellite -6 2429 1 6 641 2767 168 9 5 chrU 7437031 7437583 -2611454 + SAR_DM Satellite Satellite 326 879 -593 6 641 5865 6 0 5 chrU 7437582 7438228 -2610809 + DOC LINE Jockey 13 655 -4070 6 641 4868 6 0 0 chrU 7438446 7438984 -2610053 + DOC LINE Jockey 801 1338 -3387 6 641 2501 162 10 6 chrU 7438988 7439473 -2609564 + SAR_DM Satellite Satellite 341 827 -645 6 641 4472 40 30 0 chrU 7439574 7440106 -2608931 - R1_DM LINE R1 -1950 3406 2859 6 641 17388 4 1 2 chrU 7440102 7442037 -2607000 - ACCORD_I LTR Gypsy -4245 2043 111 6 641 9184 200 45 70 chrU 7442137 7444292 -2604745 + BATUMI_I LTR Pao 3807 5908 -2055 6 641 2239 65 2 22 chrU 7444292 7444599 -2604438 - STALKER4_LTR LTR Gypsy -3 399 106 6 641 26 93 0 0 chrU 7444775 7444850 -2604187 + AT_rich Low_complexity Low_complexity 1 75 0 6 641 445 171 51 59 chrU 7445236 7445354 -2603683 - NTS_DM Other Other -120 120 4 6 641 1360 31 0 0 chrU 7445465 7445627 -2603410 - NTS_DM Other Other -78 162 1 6 641 1075 39 25 25 chrU 7445627 7445787 -2603250 - NTS_DM Other Other 0 240 81 6 641 858 174 57 225 chrU 7445789 7446175 -2602862 - MICROPIA_LTR LTR Gypsy 0 476 156 6 641 230 103 77 0 chrU 7446157 7446196 -2602841 - MICROPIA_LTR LTR Gypsy -434 42 1 6 641 2088 117 20 26 chrU 7446196 7446546 -2602491 - MICROPIA_I LTR Gypsy 0 4476 4129 6 641 585 91 0 0 chrU 7446550 7446638 -2602399 - MICROPIA_I LTR Gypsy -507 3969 3882 6 641 3961 39 39 0 chrU 7446663 7447150 -2601887 - TRANSIB2 DNA Transib -995 1849 1344 6 641 229 330 35 9 chrU 7447465 7447578 -2601459 - Copia2_I LTR Copia -3931 231 116 6 641 516 29 186 0 chrU 7447871 7447941 -2601096 - Copia2_LTR_DM LTR Copia -115 83 1 6 641 1458 45 0 1 chrU 7447941 7448585 -2600452 + (TAA)n Simple_repeat Simple_repeat 1 643 0 6 641 26 0 0 0 chrU 7448585 7448611 -2600426 + AT_rich Low_complexity Low_complexity 1 26 0 6 641 434 106 24 53 chrU 7448611 7448780 -2600257 + (TAA)n Simple_repeat Simple_repeat 3 166 0 6 641 26 0 0 0 chrU 7448780 7448806 -2600231 + AT_rich Low_complexity Low_complexity 1 26 0 6 641 647 58 33 60 chrU 7448806 7448967 -2600070 + (TTA)n Simple_repeat Simple_repeat 3 159 0 6 641 369 0 0 0 chrU 7448967 7449008 -2600029 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 641 647 58 33 60 chrU 7449008 7449030 -2600007 + (TTA)n Simple_repeat Simple_repeat 2 23 0 6 641 578 66 0 21 chrU 7449030 7449123 -2599914 + (TAA)n Simple_repeat Simple_repeat 3 93 0 6 641 5165 14 5 0 chrU 7449123 7449697 -2599340 - Copia2_I LTR Copia -957 3205 2629 6 641 2595 102 12 35 chrU 7449798 7451190 -2597847 - DMSAT6 Satellite Satellite -54 1359 1 6 641 2678 90 12 43 chrU 7451210 7452239 -2596798 - DMSAT6 Satellite Satellite 0 996 1 6 641 4676 198 22 27 chrU 7452342 7454770 -2594267 - SAR_DM Satellite Satellite -300 2415 1 6 641 2633 104 23 34 chrU 7454909 7457316 -2591721 + DMSAT6 Satellite Satellite 1 2379 -3 6 641 17392 18 1 10 chrU 7457416 7459462 -2589575 - HETA LINE telomeric -4092 1989 1 6 641 3094 0 3 0 chrU 7459506 7459854 -2589183 - TAHRE LINE telomeric -9 10454 10106 6 641 226 284 22 11 chrU 7459974 7460063 -2588974 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 6 641 280 369 33 16 chrU 7461091 7461394 -2587643 + Invader3_I LTR Gypsy 3983 4290 -598 6 641 593 114 11 11 chrU 7461402 7461491 -2587546 - Gypsy12_I LTR Gypsy -170 5376 5288 6 641 3473 102 66 0 chrU 7461484 7461984 -2587053 - Gypsy12_I LTR Gypsy -865 4681 4149 6 641 3195 82 0 0 chrU 7461983 7462388 -2586649 - Gypsy12_I LTR Gypsy -1702 3844 3440 6 641 2735 88 21 37 chrU 7462492 7464926 -2584111 + DMSAT6 Satellite Satellite 1 2394 -29 6 641 9040 12 24 0 chrU 7465027 7466059 -2582978 - PROTOP_A DNA P -48 1057 1 6 641 5548 65 67 4 chrU 7466062 7466666 -2582371 - DOC3_DM LINE Jockey -406 4334 3688 6 641 219 36 0 0 chrU 7466666 7466694 -2582343 + (TAA)n Simple_repeat Simple_repeat 2 29 0 6 641 5548 65 67 4 chrU 7466694 7466851 -2582186 - DOC3_DM LINE Jockey -1053 3687 3526 6 641 506 55 0 196 chrU 7467110 7467222 -2581815 + TRANSIB2 DNA Transib 2741 2830 -14 6 641 1208 77 77 0 chrU 7467214 7467410 -2581627 + IDEFIX_I LTR Gypsy 5203 5413 -215 6 641 301 95 0 0 chrU 7467416 7467458 -2581579 + IDEFIX_LTR LTR Gypsy 56 97 -497 6 641 4484 188 35 26 chrU 7467575 7469979 -2579058 - SAR_DM Satellite Satellite -416 2427 1 6 641 651 125 0 0 chrU 7469889 7469993 -2579044 + ARS406_DM Unknown Unknown 1 104 -249 6 80 2706 109 43 17 chrU 7470093 7472524 -2576513 - DMSAT6 Satellite Satellite -1 2493 1 6 642 264 281 11 11 chrU 7472762 7472852 -2576185 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 6 642 34 24 0 0 chrU 7475315 7475356 -2573681 + AT_rich Low_complexity Low_complexity 1 41 0 6 642 336 110 269 21 chrU 7475366 7475459 -2573578 - HETA LINE telomeric -171 5910 5795 6 642 8061 22 74 50 chrU 7475555 7476634 -2572403 + PROTOP_A DNA P 1 1105 0 6 642 7926 23 1 0 chrU 7476676 7477581 -2571456 + DOC2_DM LINE Jockey 2322 3227 -1566 6 642 4400 206 18 25 chrU 7477686 7480103 -2568934 + SAR_DM Satellite Satellite 1 2399 -208 6 642 2682 109 13 31 chrU 7480211 7482085 -2566952 - DMSAT6 Satellite Satellite 0 1839 1 6 642 2472 112 28 16 chrU 7482117 7482631 -2566406 - DMSAT6 Satellite Satellite -3 520 1 6 642 1618 64 64 0 chrU 7482731 7482951 -2566086 + TRANSIB2 DNA Transib 2611 2844 0 6 642 5509 108 0 0 chrU 7482952 7483715 -2565322 - DMRT1B LINE R1 -1287 3896 3134 6 642 554 279 67 0 chrU 7483746 7483911 -2565126 + Gypsy12_I LTR Gypsy 3154 3329 -2217 6 642 1186 131 0 194 chrU 7484490 7484794 -2564243 - DMRT1B LINE R1 -4938 245 1 6 642 947 84 179 12 chrU 7484981 7485149 -2563888 - DMCR1A LINE CR1 -4031 439 244 6 642 450 157 8 34 chrU 7485254 7485373 -2563664 + HETA LINE telomeric 524 639 -5442 6 642 779 204 0 12 chrU 7485372 7485536 -2563501 + TAHRE LINE telomeric 9855 10016 -447 6 642 1087 334 64 44 chrU 7486210 7486804 -2562233 - Gypsy4_I LTR Gypsy -2648 3529 2810 6 642 1551 38 24 0 chrU 7486804 7487017 -2562020 - TLD2 Unknown Unknown 0 218 1 6 642 1087 334 64 44 chrU 7487017 7487473 -2561564 - Gypsy4_I LTR Gypsy -2648 2809 2255 6 642 2594 112 77 33 chrU 7487805 7488257 -2560780 + ZAM_LTR LTR Gypsy 1 472 0 6 642 398 364 5 0 chrU 7488304 7488488 -2560549 + NOMAD_I LTR Gypsy 6132 6316 -256 6 642 659 52 4 6 chrU 7488511 7488602 -2560435 + STALKER4_LTR LTR Gypsy 130 248 -154 6 642 55 0 0 0 chrU 7489046 7489101 -2559936 + AT_rich Low_complexity Low_complexity 1 55 0 6 642 3680 198 44 25 chrU 7490298 7491428 -2557609 - SAR_DM Satellite Satellite -417 1150 1 6 642 4045 192 30 40 chrU 7491662 7492716 -2556321 - SAR_DM Satellite Satellite -208 1264 221 6 642 942 99 6 20 chrU 7492816 7493444 -2555593 + RSP Satellite Satellite 1 619 0 6 642 863 121 10 15 chrU 7493484 7493877 -2555160 + RSP Satellite Satellite 1 391 0 6 642 888 109 8 15 chrU 7493917 7494427 -2554610 + RSP Satellite Satellite 1 506 0 6 642 881 85 0 14 chrU 7494467 7494747 -2554290 + RSP Satellite Satellite 1 276 0 6 642 868 109 9 18 chrU 7494787 7495230 -2553807 + RSP Satellite Satellite 1 439 0 6 642 4714 65 84 20 chrU 7495336 7496225 -2552812 + ACCORD2_I LTR Gypsy 2318 3263 -3949 6 642 6662 53 72 0 chrU 7496225 7497754 -2551283 + ACCORD2_I LTR Gypsy 3664 5302 -1910 6 642 2892 24 0 3 chrU 7497854 7498185 -2550852 - DIVER2_I LTR Pao -719 3428 3099 6 642 9612 46 10 22 chrU 7498765 7499999 -2549038 - DIVER2_I LTR Pao -1726 2421 1203 6 642 1173 39 154 0 chrU 7500002 7500158 -2548879 - DIVER2_I LTR Pao -2948 1199 1020 6 642 882 20 0 0 chrU 7500162 7500263 -2548774 - DIVER2_I LTR Pao -3883 264 164 6 642 1302 21 0 0 chrU 7500371 7500516 -2548521 + R1_DM LINE R1 5212 5356 0 6 642 3251 74 5 7 chrU 7500549 7500985 -2548052 + R1_DM LINE R1 1 435 -4921 6 642 11242 30 1 1 chrU 7500980 7502280 -2546757 + R1_DM LINE R1 1101 2400 -2956 6 642 4353 26 0 0 chrU 7502278 7502784 -2546253 + R1_DM LINE R1 2519 3024 -2332 6 642 722 110 17 0 chrU 7502884 7503002 -2546035 - ARS406_DM Unknown Unknown -233 120 1 6 642 4598 200 22 30 chrU 7502897 7505279 -2543758 + SAR_DM Satellite Satellite 1 2362 -203 6 642 376 190 19 29 chrU 7505193 7505296 -2543741 - XDMR_DM Unknown Unknown 0 360 259 6 642 1294 106 0 16 chrU 7505396 7505587 -2543450 - DMRT1B LINE R1 -1862 3321 3134 6 642 536 285 67 0 chrU 7505618 7505783 -2543254 + Gypsy12_I LTR Gypsy 3154 3329 -2217 6 642 1238 144 68 21 chrU 7506362 7506476 -2542561 - DMRT1B LINE R1 -4938 245 134 6 642 253 0 0 130 chrU 7506476 7506553 -2542484 + (TTA)n Simple_repeat Simple_repeat 3 69 0 6 642 1238 144 68 21 chrU 7506553 7506672 -2542365 - DMRT1B LINE R1 -5050 133 1 6 642 934 80 123 28 chrU 7506859 7507084 -2541953 - DMCR1A LINE CR1 -4031 439 86 6 642 332 295 76 46 chrU 7507421 7507659 -2541378 - Invader2_I LTR Gypsy -2253 2339 2095 6 642 4088 213 42 24 chrU 7507908 7510289 -2538748 - SAR_DM Satellite Satellite -446 2421 1 6 642 2612 54 6 6 chrU 7510408 7510743 -2538294 + DMRT1B LINE R1 2308 2642 -2541 6 642 10615 39 20 0 chrU 7510741 7512012 -2537025 + DMRT1B LINE R1 2800 4095 -1088 6 642 5452 78 27 6 chrU 7512006 7512802 -2536235 + DMRT1B LINE R1 4155 4990 -193 6 642 3933 39 1 27 chrU 7512902 7513639 -2535398 - ROO_I LTR Pao -6924 1332 1 6 642 3755 28 2 0 chrU 7513639 7514066 -2534971 - ROO_LTR LTR Pao 0 428 1 6 642 16278 6 1 2 chrU 7515396 7517193 -2531844 + DOC LINE Jockey 2931 4725 0 6 642 2888 24 0 0 chrU 7517209 7517543 -2531494 - R1_DM LINE R1 -2159 3197 2864 6 642 257 32 0 0 chrU 7517543 7517574 -2531463 + CIRCE LINE Composite 4950 4980 -1376 6 642 11335 50 25 3 chrU 7517886 7519441 -2529596 - G2_DM LINE Jockey -1272 3074 502 6 642 7660 8 4 1 chrU 7519431 7520276 -2528761 + STALKER4_I LTR Gypsy 3654 4500 -2030 6 642 318 113 19 0 chrU 7520376 7520429 -2528608 - ARS406_DM Unknown Unknown -299 54 1 6 642 4324 190 18 22 chrU 7520389 7522765 -2526272 + SAR_DM Satellite Satellite 1 2366 -558 6 642 4154 35 8 0 chrU 7522865 7523355 -2525682 - Copia2_I LTR Copia -1846 2316 1823 6 642 874 71 0 0 chrU 7523354 7523466 -2525571 + Copia2_I LTR Copia 1275 1386 -2776 6 642 2870 52 127 3 chrU 7523463 7524169 -2524868 + Copia2_I LTR Copia 2793 3586 -576 6 642 1246 109 109 0 chrU 7524156 7524346 -2524691 + Copia2_I LTR Copia 3726 3936 -226 6 642 1940 139 67 6 chrU 7524346 7524692 -2524345 - Invader1_LTR LTR Gypsy 0 423 57 6 642 3102 181 32 4 chrU 7524697 7525250 -2523787 + Gypsy5_I LTR Gypsy 2638 3206 -3303 6 642 2218 48 13 55 chrU 7525350 7525661 -2523376 - ROO_I LTR Pao -7958 298 1 6 642 2609 36 29 0 chrU 7525661 7525968 -2523069 - ROO_LTR LTR Pao 0 428 113 6 642 512 17 0 0 chrU 7525988 7526046 -2522991 - ROO_LTR LTR Pao -370 58 1 6 642 6579 183 96 20 chrU 7526175 7527731 -2521306 + Gypsy5_I LTR Gypsy 85 1758 -4751 6 642 4284 13 2 0 chrU 7530320 7530797 -2518240 - HETA LINE telomeric -4156 1925 1448 6 642 9047 97 75 33 chrU 7530777 7531297 -2517740 - TART LINE telomeric -6423 8054 7779 6 642 516 68 0 0 chrU 7531297 7531370 -2517667 + (CTTTA)n Simple_repeat Simple_repeat 3 75 0 6 642 9047 117 102 40 chrU 7531370 7532701 -2516336 - TART LINE telomeric -6692 7785 6735 6 642 4385 185 30 16 chrU 7532804 7534364 -2514673 - G2_DM LINE Jockey -299 1743 4 6 642 264 33 0 0 chrU 7534491 7534521 -2514516 + NTS_DM Other Other 2 31 -209 6 642 5326 14 48 42 chrU 7534522 7535187 -2513850 - CIRCE LINE Composite -5390 966 298 6 642 3296 105 113 1 chrU 7535287 7535877 -2513160 - TART LINE telomeric -7956 2698 1522 6 642 4315 126 195 3 chrU 7535918 7536886 -2512151 - TART LINE telomeric -6799 7678 6734 6 642 787 258 77 29 chrU 7536914 7537305 -2511732 - TART LINE telomeric -1178 13299 13083 6 642 761 116 82 69 chrU 7537292 7537476 -2511561 - TART LINE telomeric -10448 4029 3884 6 642 1699 26 0 0 chrU 7537476 7537669 -2511368 + PROTOP_A DNA P 1 193 -912 6 642 4431 184 29 47 chrU 7537776 7540116 -2508921 - SAR_DM Satellite Satellite -406 2296 1 6 642 649 184 0 0 chrU 7540026 7540151 -2508886 + ARS406_DM Unknown Unknown 8 132 -221 6 642 6596 31 3 5 chrU 7540263 7541045 -2507992 - G2_DM LINE Jockey -912 2190 1411 6 642 22 56 0 0 chrU 7541208 7541244 -2507793 + AT_rich Low_complexity Low_complexity 1 36 0 6 642 265 32 0 0 chrU 7541293 7541324 -2507713 - R2_DM LINE R2 -1866 1741 1711 6 642 10799 51 1 0 chrU 7541323 7542633 -2506404 - R2_DM LINE R2 -2121 1486 175 6 642 17711 4 3 0 chrU 7542733 7545114 -2503923 + TART_B1 LINE telomeric 1 1936 -8718 6 642 12423 11 7 1 chrU 7545217 7546701 -2502336 + QUASIMODO_I LTR Gypsy 4567 6060 0 6 642 5573 17 3 0 chrU 7546701 7547332 -2501705 + QUASIMODO_LTR LTR Gypsy 1 633 -25 6 642 400 0 0 0 chrU 7547348 7547395 -2501642 - QUASIMODO_LTR LTR Gypsy 0 658 612 6 642 1623 10 0 0 chrU 7547388 7547593 -2501444 - QUASIMODO_I LTR Gypsy -451 5609 5405 6 642 3600 192 16 21 chrU 7547695 7548532 -2500505 - SAR_DM Satellite Satellite -242 1230 399 6 642 2810 40 0 0 chrU 7548531 7548859 -2500178 - DM1731_LTR LTR Copia 0 336 9 6 642 3902 0 0 0 chrU 7548859 7549283 -2499754 + Stalker2_LTR LTR Gypsy 1 424 0 6 642 6942 5 6 6 chrU 7549295 7550072 -2498965 - DM1731_I LTR Copia 0 3976 3200 6 642 8587 43 5 21 chrU 7550172 7551255 -2497782 + DIVER2_I LTR Pao 819 1883 -2264 6 642 5750 146 54 55 chrU 7551254 7552550 -2496487 + DIVER2_I LTR Pao 2089 3355 -792 6 642 980 301 53 55 chrU 7552650 7554980 -2494057 + SAR_DM Satellite Satellite 1 2325 -449 6 642 13931 20 11 1 chrU 7555125 7556742 -2492295 - R1_DM LINE R1 -72 5284 3653 6 642 3406 51 1 14 chrU 7556742 7557181 -2491856 + STALKER4_LTR LTR Gypsy 1 399 -3 6 642 24 0 0 0 chrU 7557269 7557293 -2491744 + AT_rich Low_complexity Low_complexity 1 24 0 6 642 762 216 5 10 chrU 7557293 7557493 -2491544 + Stalker2_I LTR Gypsy 214 465 -6937 6 642 3163 198 30 17 chrU 7558379 7559633 -2489404 - SAR_DM Satellite Satellite -625 1270 1 6 642 350 234 11 0 chrU 7559629 7559723 -2489314 + XDMR Unknown Unknown 249 343 -18 6 642 2971 257 33 58 chrU 7559650 7560591 -2488446 - SAR_DM Satellite Satellite -314 1158 242 6 642 378 114 86 0 chrU 7560581 7560651 -2488386 + ARS406_DM Unknown Unknown 112 187 -166 6 642 2554 178 41 12 chrU 7560606 7561196 -2487841 - SAR_DM Satellite Satellite -610 862 256 6 642 3976 199 47 17 chrU 7561216 7562433 -2486604 - SAR_DM Satellite Satellite -470 1253 1 6 642 16198 27 1 1 chrU 7562535 7564402 -2484635 + R1_DM LINE R1 2777 4644 -712 6 642 4355 29 15 4 chrU 7564379 7564900 -2484137 + R1_DM LINE R1 3448 3974 -1382 6 642 4462 202 24 24 chrU 7565022 7567339 -2481698 - SAR_DM Satellite Satellite -396 2318 1 6 642 811 108 0 15 chrU 7567231 7567363 -2481674 + ARS406_DM Unknown Unknown 1 130 -223 6 642 26 30 0 0 chrU 7567502 7567535 -2481502 + AT_rich Low_complexity Low_complexity 1 33 0 6 642 21 57 0 0 chrU 7567581 7567616 -2481421 + AT_rich Low_complexity Low_complexity 1 35 0 6 642 21 89 0 0 chrU 7567653 7567709 -2481328 + AT_rich Low_complexity Low_complexity 1 56 0 6 642 204 40 0 0 chrU 7568608 7568633 -2480404 + (TTG)n Simple_repeat Simple_repeat 2 26 0 6 642 877 65 32 0 chrU 7568803 7569008 -2480029 + PROTOP_B DNA P 570 754 -399 6 642 24 0 0 0 chrU 7569371 7569395 -2479642 + AT_rich Low_complexity Low_complexity 1 24 0 6 642 21 57 0 0 chrU 7569450 7569485 -2479552 + AT_rich Low_complexity Low_complexity 1 35 0 6 642 1337 282 89 24 chrU 7569929 7570423 -2478614 + Gypsy6_I LTR Gypsy 5509 6034 -978 6 642 581 219 0 16 chrU 7570445 7570570 -2478467 + Gypsy2_I LTR Gypsy 5249 5371 -764 6 642 934 112 406 6 chrU 7570571 7570746 -2478291 + Gypsy10_I LTR Gypsy 3361 3605 -1673 6 642 3211 24 35 0 chrU 7570746 7571118 -2477919 - DIVER2_LTR LTR Pao 0 385 1 6 642 3455 22 8 2 chrU 7571119 7571521 -2477516 - DIVER2_I LTR Pao -2 4145 3742 6 642 5024 54 5 0 chrU 7571513 7572107 -2476930 - DIVER2_I LTR Pao -753 3394 2798 6 642 654 193 11 67 chrU 7572107 7572285 -2476752 + Gypsy5_LTR LTR Gypsy 1 168 -262 6 642 20360 26 1 1 chrU 7572385 7574742 -2474295 - R1_DM LINE R1 -743 4613 2258 6 642 7173 27 13 20 chrU 7574842 7575704 -2473333 + CIRCE LINE Composite 2621 3476 -2880 6 642 5500 22 11 2 chrU 7575700 7576324 -2472713 - BEL_I LTR Pao -4773 631 2 6 642 2968 53 0 0 chrU 7576328 7576689 -2472348 - BEL_LTR LTR Pao 0 361 1 6 642 3644 61 4 26 chrU 7576693 7577198 -2471839 - IDEFIX_I LTR Gypsy -731 4897 4404 6 642 19646 23 28 0 chrU 7577298 7579653 -2469384 + R1_DM LINE R1 916 3335 -2021 6 642 4574 25 2 6 chrU 7579753 7580285 -2468752 - FW_DM LINE Jockey -1878 2814 2285 6 642 15317 24 21 6 chrU 7580296 7582107 -2466930 - FW_DM LINE Jockey -2501 2191 354 6 642 6177 27 29 1 chrU 7582207 7582943 -2466094 - R1_DM LINE R1 -2330 3026 2271 6 642 442 20 0 0 chrU 7582936 7582986 -2466051 + CIRCE LINE Composite 4931 4980 -1376 6 642 3578 31 4 43 chrU 7583344 7583809 -2465228 + CIRCE LINE Composite 4981 5427 -929 6 642 3994 26 18 0 chrU 7583908 7584364 -2464673 + CIRCE LINE Composite 5893 6356 0 6 642 1716 25 0 0 chrU 7584364 7584560 -2464477 + CIRCE LINE Composite 1 196 -6160 6 642 3693 17 150 0 chrU 7584660 7584871 -2464166 + TART LINE telomeric 7505 7722 -6755 6 642 549 55 0 0 chrU 7584871 7584944 -2464093 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 6 642 3693 17 150 0 chrU 7584944 7585192 -2463845 + TART LINE telomeric 7723 8031 -6446 6 642 5951 179 73 28 chrU 7585190 7586732 -2462305 + TART LINE telomeric 5523 6653 -7824 6 642 1444 124 4 4 chrU 7586784 7587011 -2462026 + TART LINE telomeric 6734 6960 -7517 6 642 1769 58 4 40 chrU 7587175 7587425 -2461612 - BATUMI_LTR LTR Pao 0 272 32 6 642 3232 27 0 0 chrU 7587448 7587822 -2461215 + Invader2_I LTR Gypsy 3522 3895 -697 6 642 4649 34 5 8 chrU 7587835 7588431 -2460606 + Invader2_I LTR Gypsy 3999 4592 0 6 642 2017 62 27 0 chrU 7588431 7588690 -2460347 + Invader2_LTR LTR Gypsy 1 266 0 6 642 546 319 79 53 chrU 7588772 7589281 -2459756 - Gypsy5_I LTR Gypsy -5713 796 275 6 642 575 0 0 0 chrU 7589558 7589620 -2459417 - STALKER4_LTR LTR Gypsy -340 62 1 6 642 23 0 0 0 chrU 7589667 7589690 -2459347 + AT_rich Low_complexity Low_complexity 1 23 0 6 642 705 252 269 22 chrU 7589751 7590247 -2458790 + Copia_I LTR Copia 1653 2271 -2322 6 642 302 284 91 39 chrU 7590440 7590671 -2458366 + Copia_I LTR Copia 2721 2963 -1630 6 642 1141 273 75 45 chrU 7590792 7591375 -2457662 + Copia_I LTR Copia 3146 3746 -847 6 642 3102 50 1 15 chrU 7591499 7591902 -2457135 - STALKER4_LTR LTR Gypsy -3 399 37 6 642 8483 35 26 3 chrU 7592003 7593017 -2456020 - DMCR1A LINE CR1 -3176 1294 258 6 642 853 28 0 19 chrU 7593022 7593130 -2455907 - DMCR1A LINE CR1 -4364 106 1 6 642 41 21 0 0 chrU 7593722 7593770 -2455267 + AT_rich Low_complexity Low_complexity 1 48 0 6 642 1877 205 0 0 chrU 7593976 7594346 -2454691 + Gypsy5_I LTR Gypsy 1913 2282 -4227 6 642 273 170 0 0 chrU 7594824 7594871 -2454166 - Gypsy12_LTR LTR Gypsy 0 2336 2290 6 642 2751 166 32 24 chrU 7594871 7595502 -2453535 - Gypsy12_LTR LTR Gypsy -80 2256 1582 6 642 2109 242 114 54 chrU 7595576 7596617 -2452420 - Gypsy12_LTR LTR Gypsy -889 1447 344 6 642 954 39 193 0 chrU 7596617 7596788 -2452249 + DIVER2_LTR LTR Pao 1 204 -181 6 642 4470 91 122 16 chrU 7596888 7597560 -2451477 + Gypsy12_I LTR Gypsy 4804 5546 0 6 642 2421 241 119 71 chrU 7597572 7598598 -2450439 + Gypsy12_LTR LTR Gypsy 13 1087 -1249 6 642 741 105 10 13 chrU 7598667 7598796 -2450241 + Gypsy12_LTR LTR Gypsy 1180 1374 -962 6 642 381 218 34 34 chrU 7598856 7599003 -2450034 + Gypsy12A_LTR LTR Gypsy 1581 1727 -553 6 642 355 118 0 0 chrU 7599032 7599083 -2449954 + Gypsy12_LTR LTR Gypsy 2286 2336 0 6 642 895 58 34 61 chrU 7599083 7599230 -2449807 + Gypsy12_I LTR Gypsy 1 143 -5403 6 642 4352 189 40 51 chrU 7599330 7601665 -2447372 - SAR_DM Satellite Satellite -303 2308 1 6 643 378 316 57 57 chrU 7603506 7604073 -2444964 + BLASTOPIA_I LTR Gypsy 2067 2596 -1885 6 643 3711 7 2 12 chrU 7604199 7604630 -2444407 + FW_DM LINE Jockey 4266 4692 0 6 643 4374 53 2 11 chrU 7604632 7605188 -2443849 - ROO_I LTR Pao -232 8024 7474 6 643 1709 16 0 0 chrU 7605181 7605370 -2443667 - ROO_I LTR Pao -1000 7256 7068 6 643 377 221 63 69 chrU 7605484 7605659 -2443378 - Gypsy3_LTR LTR Gypsy -113 285 112 6 643 26 50 0 0 chrU 7605821 7605861 -2443176 + AT_rich Low_complexity Low_complexity 1 40 0 6 643 4609 25 8 52 chrU 7605929 7606529 -2442508 - ROO_I LTR Pao -1172 7084 6511 6 643 808 150 7 39 chrU 7606633 7606786 -2442251 - TART LINE telomeric -7441 7036 6889 6 643 10100 132 70 45 chrU 7606802 7608957 -2440080 - TART LINE telomeric -7824 6653 3894 6 643 4344 209 21 28 chrU 7609063 7611385 -2437652 - SAR_DM Satellite Satellite -837 2305 1 6 643 2958 219 116 50 chrU 7611487 7613091 -2435946 - Gypsy12_LTR LTR Gypsy -592 1688 1 6 643 4985 83 50 12 chrU 7613091 7613811 -2435226 - Gypsy12_I LTR Gypsy 0 5546 4800 6 643 2351 103 26 31 chrU 7613913 7616236 -2432801 + DMSAT6 Satellite Satellite 1 2311 -29 6 643 3751 207 10 15 chrU 7616336 7617594 -2431443 - SAR_DM Satellite Satellite -383 1250 1 6 643 878 93 154 0 chrU 7617498 7617660 -2431377 + ARS406_DM Unknown Unknown 1 187 -166 6 643 3766 183 35 20 chrU 7617640 7618621 -2430416 - SAR_DM Satellite Satellite -283 1189 195 6 643 755 85 0 0 chrU 7618540 7618658 -2430379 + ARS406_DM Unknown Unknown 13 130 -223 6 643 18264 27 29 0 chrU 7618758 7621076 -2427961 + R1_DM LINE R1 2183 4566 -790 6 643 269 54 0 0 chrU 7621176 7621213 -2427824 - R1_DM LINE R1 -5319 37 1 6 643 943 35 0 0 chrU 7621246 7621360 -2427677 - R1_DM LINE R1 0 5356 5243 6 643 5193 29 14 1 chrU 7621357 7622009 -2427028 - R1_DM LINE R1 -290 5066 4407 6 643 10525 18 63 1 chrU 7622029 7623493 -2425544 - R1_DM LINE R1 -1074 4282 2729 6 643 660 93 46 0 chrU 7623593 7623701 -2425336 + TART LINE telomeric 10225 10337 -4140 6 643 1825 68 0 8 chrU 7623697 7623965 -2425072 + TAHRE LINE telomeric 10186 10451 -12 6 643 3333 190 81 35 chrU 7623964 7624959 -2424078 + TAHRE LINE telomeric 7044 8084 -2379 6 643 7384 21 0 5 chrU 7624967 7625901 -2423136 - PROTOP_A DNA P 0 1105 177 6 643 15307 6 6 18 chrU 7626001 7627831 -2421206 - MICROPIA_I LTR Gypsy -2668 1808 1 6 643 3611 2 2 67 chrU 7627831 7628309 -2420728 - MICROPIA_LTR LTR Gypsy 0 476 30 6 643 253 61 0 0 chrU 7628409 7628442 -2420595 + ARS406_DM Unknown Unknown 157 189 -164 6 643 4066 198 30 28 chrU 7628418 7630716 -2418321 - SAR_DM Satellite Satellite -281 2302 1 6 643 3940 99 53 6 chrU 7630816 7631438 -2417599 - HETA LINE telomeric -3002 3079 2429 6 643 1760 70 11 39 chrU 7631436 7631717 -2417320 - HETA LINE telomeric -3915 2166 1894 6 643 1121 59 0 0 chrU 7631716 7631869 -2417168 - HETA LINE telomeric -4524 1557 1405 6 643 1411 80 5 5 chrU 7632024 7632238 -2416799 - HETA LINE telomeric -123 5958 5745 6 643 3549 133 197 26 chrU 7632243 7633117 -2415920 - TART LINE telomeric -4263 10214 9192 6 643 3425 104 60 13 chrU 7633221 7633775 -2415262 + Gypsy12_I LTR Gypsy 2125 2704 -2842 6 643 6333 98 101 7 chrU 7633788 7635523 -2413514 + Gypsy12_I LTR Gypsy 3028 4984 -562 6 643 442 56 0 0 chrU 7635623 7635695 -2413342 + IDEFIX_LTR LTR Gypsy 523 594 0 6 643 1038 178 38 55 chrU 7635746 7636038 -2412999 + Gypsy5_LTR LTR Gypsy 3 289 -141 6 643 23 33 0 0 chrU 7636072 7636102 -2412935 + AT_rich Low_complexity Low_complexity 1 30 0 6 643 321 96 19 37 chrU 7636179 7636233 -2412804 + Gypsy5_I LTR Gypsy 1 53 -6456 6 643 5716 182 6 14 chrU 7636783 7637918 -2411119 + Gypsy5_I LTR Gypsy 279 1404 -5105 6 643 2143 119 3 3 chrU 7638019 7638364 -2410673 + HETA LINE telomeric 695 1039 -5042 6 643 6271 42 6 4 chrU 7638363 7639176 -2409861 + HETA LINE telomeric 1215 2029 -4052 6 643 1393 45 0 0 chrU 7639188 7639366 -2409671 + HETA LINE telomeric 2639 2816 -3265 6 643 2808 41 33 8 chrU 7639364 7639758 -2409279 + HETA LINE telomeric 3350 3753 -2328 6 643 4247 34 7 2 chrU 7639753 7640313 -2408724 + HETA LINE telomeric 4374 4936 -1145 6 643 320 218 0 19 chrU 7640414 7640517 -2408520 + XDMR_DM Unknown Unknown 260 360 0 6 643 3978 192 18 23 chrU 7640431 7642705 -2406332 - SAR_DM Satellite Satellite -354 2262 1 6 643 2559 304 78 18 chrU 7642896 7644454 -2404583 + MICROPIA_I LTR Gypsy 1301 3415 -1061 6 643 3165 212 28 27 chrU 7645201 7649787 -2399250 - SAR_DM Satellite Satellite -255 4591 1 6 643 665 46 0 0 chrU 7649786 7649873 -2399164 + ARS406_DM Unknown Unknown 90 176 -177 6 643 3134 197 13 17 chrU 7649973 7652259 -2396778 + SAR_DM Satellite Satellite 1 2276 -208 6 643 892 18 0 0 chrU 7652359 7652469 -2396568 - R1_DM LINE R1 -320 5036 4927 6 643 6992 20 19 6 chrU 7652467 7653355 -2395682 - R1_DM LINE R1 -1401 3955 3056 6 643 10923 16 5 0 chrU 7653332 7654643 -2394394 - R1_DM LINE R1 -2608 2748 1431 6 643 4039 191 19 23 chrU 7654743 7657026 -2392011 - SAR_DM Satellite Satellite -374 2272 1 6 643 4541 37 143 1 chrU 7657126 7657867 -2391170 - R1_DM LINE R1 -3929 1427 582 6 643 2470 72 33 6 chrU 7657841 7658204 -2390833 - R1_DM LINE R1 -4983 373 1 6 643 9639 25 2 0 chrU 7658237 7659408 -2389629 - R1_DM LINE R1 0 5356 4184 6 643 3878 193 31 24 chrU 7659508 7661777 -2387260 + SAR_DM Satellite Satellite 1 2286 -216 6 643 2165 164 111 19 chrU 7661907 7662491 -2386546 + HETA LINE telomeric 4755 5392 -689 6 643 3578 198 39 35 chrU 7662506 7663493 -2385544 + HETA LINE telomeric 3203 4192 -1889 6 643 382 43 0 0 chrU 7663488 7663534 -2385503 + TAHRE LINE telomeric 10399 10444 -19 6 643 625 150 48 35 chrU 7663574 7663797 -2385240 + HETA LINE telomeric 493 665 -5416 6 643 1009 171 143 59 chrU 7663812 7664098 -2384939 + HETA LINE telomeric 5321 5630 -451 6 643 32 0 0 0 chrU 7664119 7664151 -2384886 + AT_rich Low_complexity Low_complexity 1 32 0 6 643 4033 202 17 28 chrU 7664251 7666507 -2382530 - SAR_DM Satellite Satellite -436 2232 1 6 643 430 120 0 0 chrU 7666445 7666520 -2382517 + ARS406_DM Unknown Unknown 1 75 -278 6 643 292 118 20 0 chrU 7666628 7666679 -2382358 + Gypsy12_I LTR Gypsy 1053 1104 -4442 6 643 592 274 46 32 chrU 7666676 7667031 -2382006 + TV1I LTR Gypsy 574 942 -5118 6 643 3395 50 0 27 chrU 7667284 7667733 -2381304 - PROTOP_A DNA P -668 437 1 6 643 920 224 91 17 chrU 7667733 7667965 -2381072 - DM297_I LTR Gypsy -2137 3975 3727 6 643 2126 216 76 6 chrU 7668039 7668821 -2380216 - DM297_I LTR Gypsy -3053 3059 2267 6 643 1289 68 4 19 chrU 7669019 7669274 -2379763 + (CTATT)n Simple_repeat Simple_repeat 1 251 0 6 643 1521 59 6 3 chrU 7669307 7669664 -2379373 + (CTATT)n Simple_repeat Simple_repeat 1 358 0 6 643 413 152 9 0 chrU 7669685 7669790 -2379247 + (CTATT)n Simple_repeat Simple_repeat 2 107 0 6 643 1242 73 0 0 chrU 7669803 7669982 -2379055 + (CTATT)n Simple_repeat Simple_repeat 2 180 0 6 643 348 130 0 0 chrU 7669996 7670065 -2378972 + (TTATA)n Simple_repeat Simple_repeat 5 73 0 6 643 742 148 6 6 chrU 7670092 7670269 -2378768 + (TTATA)n Simple_repeat Simple_repeat 2 178 0 6 643 220 151 0 52 chrU 7670283 7670307 -2378730 + (TTATA)n Simple_repeat Simple_repeat 4 26 0 6 643 957 96 11 11 chrU 7670307 7670486 -2378551 + (CTATT)n Simple_repeat Simple_repeat 2 180 0 6 643 220 151 0 52 chrU 7670486 7670538 -2378499 + (TTATA)n Simple_repeat Simple_repeat 4 53 0 6 643 1334 98 12 9 chrU 7670558 7670900 -2378137 + (CTATT)n Simple_repeat Simple_repeat 1 343 0 6 643 1148 109 9 15 chrU 7670915 7671251 -2377786 + (CTATT)n Simple_repeat Simple_repeat 1 333 0 6 643 3951 189 25 23 chrU 7671362 7672636 -2376401 - SAR_DM Satellite Satellite -300 1276 1 6 643 232 108 0 0 chrU 7672604 7672641 -2376396 + ARS406_DM Unknown Unknown 1 37 -316 6 643 3969 183 14 17 chrU 7672654 7673613 -2375424 - SAR_DM Satellite Satellite -439 956 1 6 643 3757 199 18 47 chrU 7673717 7674767 -2374270 - SAR_DM Satellite Satellite -872 1019 1 6 643 4185 203 45 22 chrU 7674787 7675918 -2373119 - SAR_DM Satellite Satellite -259 1213 57 6 643 931 266 19 13 chrU 7675652 7675960 -2373077 + XDMR_DM Unknown Unknown 6 315 -45 6 643 2687 102 18 21 chrU 7676074 7678288 -2370749 + DMSAT6 Satellite Satellite 1 2208 -141 6 643 1254 94 10 8 chrU 7678425 7679493 -2369544 + (CTATT)n Simple_repeat Simple_repeat 1 1070 0 6 643 1455 89 5 3 chrU 7679511 7680671 -2368366 + (CTATT)n Simple_repeat Simple_repeat 1 1162 0 6 643 4396 205 34 25 chrU 7680776 7683020 -2366017 + SAR_DM Satellite Satellite 1 2264 -216 6 643 15953 3 0 0 chrU 7683120 7684871 -2364166 + DIVER_I LTR Pao 1450 3200 -2443 6 643 4403 12 0 0 chrU 7684870 7685365 -2363672 + DIVER_I LTR Pao 3344 3838 -1805 6 643 21 0 0 0 chrU 7685885 7685906 -2363131 + AT_rich Low_complexity Low_complexity 1 21 0 6 643 49 43 0 0 chrU 7686080 7686150 -2362887 + AT_rich Low_complexity Low_complexity 1 70 0 6 643 322 166 202 84 chrU 7686268 7686446 -2362591 + DNAREP1_DM LINE Penelope 16 214 -380 6 643 864 171 67 16 chrU 7686430 7686645 -2362392 - DNAREP1_DM LINE Penelope -262 332 117 6 643 1012 121 19 0 chrU 7686701 7686858 -2362179 - DNAREP1_DM LINE Penelope -429 165 6 6 643 216 0 0 0 chrU 7687445 7687469 -2361568 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 643 39 68 0 0 chrU 7687470 7687544 -2361493 + AT_rich Low_complexity Low_complexity 1 74 0 6 643 3948 202 16 22 chrU 7687804 7690011 -2359026 - SAR_DM Satellite Satellite -501 2193 1 6 643 776 99 8 0 chrU 7689918 7690039 -2358998 + ARS406_DM Unknown Unknown 1 122 -231 6 643 3450 50 22 24 chrU 7692475 7692927 -2356110 + CIRCE LINE Composite 1432 1882 -4474 6 643 731 296 40 40 chrU 7692924 7693301 -2355736 + Gypsy12_I LTR Gypsy 3823 4199 -1347 6 643 2926 40 5 29 chrU 7692997 7693379 -2355658 + CIRCE LINE Composite 1884 2256 -4100 6 643 7712 58 153 33 chrU 7693376 7694562 -2354475 + CIRCE LINE Composite 2713 4040 -2316 6 643 1007 90 14 0 chrU 7694563 7694708 -2354329 + CIRCE LINE Composite 4283 4429 -1927 6 643 2701 225 42 62 chrU 7694850 7695670 -2353367 - Gypsy12_LTR LTR Gypsy -1533 803 1 6 643 373 297 0 0 chrU 7695670 7695792 -2353245 - DM297_I LTR Gypsy -2709 3458 3337 6 643 2212 118 41 41 chrU 7695799 7696254 -2352783 - Gypsy12_I LTR Gypsy -4570 976 449 6 643 2237 215 117 19 chrU 7696253 7697039 -2351998 - Gypsy12_LTR LTR Gypsy -377 1959 1097 6 643 4553 51 62 1 chrU 7697140 7698034 -2351003 + DMCR1A LINE CR1 1555 2502 -1968 6 643 799 107 0 0 chrU 7698043 7698155 -2350882 + DMCR1A LINE CR1 3441 3552 -918 6 643 2545 250 94 22 chrU 7698501 7699372 -2349665 + TV1I LTR Gypsy 1867 2800 -3163 6 643 4438 191 16 23 chrU 7699486 7701699 -2347338 - SAR_DM Satellite Satellite -291 2196 1 6 643 2581 17 0 0 chrU 7701803 7702105 -2346932 - FW_DM LINE Jockey -1842 2850 2549 6 643 2634 142 130 5 chrU 7702105 7703207 -2345830 + HETA LINE telomeric 1299 2677 -3404 6 643 2102 192 136 6 chrU 7703203 7703696 -2345341 + HETA LINE telomeric 2959 3515 -2566 6 643 3018 3 0 0 chrU 7703697 7704027 -2345010 - Invader4_LTR LTR Gypsy 0 346 17 6 643 10687 28 13 1 chrU 7704127 7705377 -2343660 + MAX_I LTR Pao 5867 7131 -783 6 643 3131 55 177 60 chrU 7705375 7705922 -2343115 + MAX_I LTR Pao 7302 7912 -2 6 643 420 0 0 0 chrU 7705927 7705975 -2343062 + MAX_LTR LTR Pao 1 48 -273 6 643 256 254 106 84 chrU 7705962 7706104 -2342933 + MAX_LTR LTR Pao 177 321 0 6 643 754 57 0 0 chrU 7706104 7706209 -2342828 + TLD2 Unknown Unknown 114 218 0 6 643 398 301 24 24 chrU 7706137 7706348 -2342689 + DM297_I LTR Gypsy 2773 2983 -3184 6 643 1927 60 0 0 chrU 7706451 7706699 -2342338 + R1_DM LINE R1 370 617 -4739 6 643 4769 35 118 1 chrU 7706698 7707562 -2341475 + R1_DM LINE R1 1101 2065 -3291 6 643 9416 29 5 0 chrU 7707564 7708674 -2340363 + R1_DM LINE R1 2394 3509 -1847 6 643 2679 94 20 31 chrU 7708800 7710512 -2338525 - DMSAT6 Satellite Satellite 0 1693 1 6 643 2297 119 31 16 chrU 7710550 7710995 -2338042 - DMSAT6 Satellite Satellite 0 470 19 6 643 4366 203 16 29 chrU 7711095 7713315 -2335722 - SAR_DM Satellite Satellite -355 2190 1 6 643 405 173 0 12 chrU 7713415 7713497 -2335540 - G2_DM LINE Jockey -574 2528 2448 6 643 5681 45 1 4 chrU 7713802 7714510 -2334527 + G2_DM LINE Jockey 1411 2116 -986 6 643 1293 80 0 0 chrU 7714509 7714684 -2334353 + G2_DM LINE Jockey 2354 2528 -574 6 643 5022 53 8 5 chrU 7714684 7715331 -2333706 - G2_DM LINE Jockey -6 3096 2448 6 643 22 56 0 0 chrU 7715452 7715488 -2333549 + AT_rich Low_complexity Low_complexity 1 36 0 6 643 272 57 0 0 chrU 7715732 7715767 -2333270 + FB4_DM DNA Tc1 4054 4088 -1 6 643 1430 151 37 0 chrU 7715803 7716075 -2332962 - SAR_DM Satellite Satellite -658 814 533 6 643 346 217 0 11 chrU 7716080 7716173 -2332864 + XDMR_DM Unknown Unknown 258 349 -11 6 643 4085 210 40 32 chrU 7716104 7717825 -2331212 - SAR_DM Satellite Satellite -359 1733 1 6 643 495 102 101 9 chrU 7717834 7717943 -2331094 + FB4_DM DNA Tc1 173 291 -3798 6 643 4192 240 24 27 chrU 7718048 7720869 -2328168 + SAR_DM Satellite Satellite 1 2812 -220 6 643 404 204 9 18 chrU 7720783 7720893 -2328144 - XDMR_DM Unknown Unknown 0 360 252 6 643 4367 198 20 26 chrU 7720883 7722567 -2326470 + SAR_DM Satellite Satellite 1 1673 -216 6 643 811 96 17 0 chrU 7722669 7722778 -2326259 + Gypsy12_LTR LTR Gypsy 126 236 -2100 6 643 3203 32 11 0 chrU 7722778 7723156 -2325881 + DIVER2_LTR LTR Pao 4 385 0 6 643 11267 75 73 20 chrU 7723156 7724874 -2324163 + DIVER2_I LTR Pao 1 1808 -2339 6 643 22 0 0 0 chrU 7725101 7725123 -2323914 + AT_rich Low_complexity Low_complexity 1 22 0 6 643 4450 23 29 0 chrU 7726278 7726803 -2322234 - NINJA_I LTR Pao -2033 3978 3439 6 643 3232 21 16 0 chrU 7726798 7727180 -2321857 - NINJA_I LTR Pao -2790 3221 2834 6 643 3745 213 46 41 chrU 7727300 7729485 -2319552 + SAR_DM Satellite Satellite 1 2197 -396 6 643 11833 176 21 10 chrU 7729593 7731787 -2317250 + TAHRE LINE telomeric 265 2484 -7979 6 643 3901 178 24 22 chrU 7731895 7732820 -2316217 - SAR_DM Satellite Satellite -300 1172 246 6 643 381 213 9 18 chrU 7732810 7732920 -2316117 + XDMR_DM Unknown Unknown 252 360 0 6 80 4245 182 22 26 chrU 7732834 7734086 -2314951 - SAR_DM Satellite Satellite -353 1247 1 6 644 2629 93 9 68 chrU 7734220 7736385 -2312652 - DMSAT6 Satellite Satellite -3 2038 1 6 644 3915 211 37 13 chrU 7736489 7738612 -2310425 + SAR_DM Satellite Satellite 1 2174 -203 6 644 2735 88 32 17 chrU 7738786 7740316 -2308721 + DMSAT6 Satellite Satellite 1 1552 -40 6 644 3089 42 5 0 chrU 7740303 7740680 -2308357 + STALKER4_LTR LTR Gypsy 1 379 -23 6 644 24 77 0 0 chrU 7740806 7740858 -2308179 + AT_rich Low_complexity Low_complexity 1 52 0 6 644 615 184 0 0 chrU 7740859 7740984 -2308053 + STALKER4_I LTR Gypsy 235 359 -6171 6 644 2118 183 7 5 chrU 7741084 7741533 -2307504 - SAR_DM Satellite Satellite -724 748 299 6 644 15795 3 0 0 chrU 7741544 7743280 -2305757 + BS2 LINE Jockey 11 1746 -2975 6 644 3762 16 22 105 chrU 7743405 7743958 -2305079 - DM176_LTR LTR Gypsy 0 507 1 6 644 3735 67 116 53 chrU 7743958 7744587 -2304450 - ROO_I LTR Pao -7471 785 114 6 644 3590 37 0 2 chrU 7744620 7745049 -2303988 - ROO_LTR LTR Pao 0 428 1 6 644 26 50 0 0 chrU 7745084 7745124 -2303913 + AT_rich Low_complexity Low_complexity 1 40 0 6 644 39 50 0 0 chrU 7745339 7745399 -2303638 + AT_rich Low_complexity Low_complexity 1 60 0 6 644 4460 197 20 26 chrU 7745673 7747863 -2301174 - SAR_DM Satellite Satellite -436 2177 1 6 644 5727 14 0 1 chrU 7747976 7748622 -2300415 + Gypsy12_I LTR Gypsy 4895 5539 -7 6 644 12445 22 31 18 chrU 7748630 7750155 -2298882 + Gypsy12_LTR LTR Gypsy 1 1545 -791 6 644 5618 14 0 10 chrU 7750255 7750969 -2298068 + STALKER4_I LTR Gypsy 5824 6530 0 6 644 3578 5 0 2 chrU 7750969 7751372 -2297665 + STALKER4_LTR LTR Gypsy 1 402 0 6 644 4016 202 12 21 chrU 7751386 7752387 -2296650 + SAR_DM Satellite Satellite 264 1255 -217 6 644 1000 92 0 0 chrU 7752298 7752440 -2296597 - ARS406_DM Unknown Unknown -164 189 48 6 644 260 167 0 29 chrU 7752549 7752617 -2296420 + XDMR_DM Unknown Unknown 295 360 0 6 644 4426 199 37 30 chrU 7752558 7754732 -2294305 - SAR_DM Satellite Satellite -382 2189 1 6 644 474 166 92 55 chrU 7754833 7755050 -2293987 + MAX_I LTR Pao 300 524 -7390 6 644 8121 85 56 144 chrU 7755296 7757020 -2292017 + MAX_I LTR Pao 557 2128 -5786 6 644 2500 114 92 48 chrU 7757120 7757717 -2291320 + STALKER4_I LTR Gypsy 475 1160 -5370 6 644 13536 14 20 0 chrU 7757711 7759305 -2289732 + STALKER4_I LTR Gypsy 1374 2999 -3531 6 644 2581 51 151 3 chrU 7759410 7759929 -2289108 + PROTOP DNA P 4025 4480 0 6 644 26 30 0 0 chrU 7760306 7760339 -2288698 + AT_rich Low_complexity Low_complexity 1 33 0 6 644 21 57 0 0 chrU 7760385 7760420 -2288617 + AT_rich Low_complexity Low_complexity 1 35 0 6 644 21 89 0 0 chrU 7760458 7760514 -2288523 + AT_rich Low_complexity Low_complexity 1 56 0 6 644 898 43 129 0 chrU 7761473 7761589 -2287448 + PROTOP_B DNA P 1 131 -1022 6 644 3998 188 13 19 chrU 7761697 7762630 -2286407 - SAR_DM Satellite Satellite -300 1172 246 6 644 243 212 98 29 chrU 7762620 7762722 -2286315 + XDMR_DM Unknown Unknown 252 360 0 6 644 4129 204 15 23 chrU 7762663 7763866 -2285171 - SAR_DM Satellite Satellite -382 1192 1 6 644 3296 8 0 0 chrU 7763966 7764335 -2284702 + QUASIMODO_LTR LTR Gypsy 290 658 0 6 644 268 162 66 41 chrU 7764335 7764453 -2284584 - Gypsy5_I LTR Gypsy -6301 208 88 6 644 3183 14 0 5 chrU 7765225 7765599 -2283438 - PROTOP DNA P 0 4480 4109 6 644 4302 38 4 2 chrU 7765592 7766142 -2282895 - PROTOP DNA P -3220 1260 710 6 644 2241 300 123 8 chrU 7767167 7768410 -2280627 + TIRANT_I LTR Gypsy 3444 4665 -3027 6 644 4399 205 20 27 chrU 7768520 7770680 -2278357 + SAR_DM Satellite Satellite 1 2145 -216 6 644 1194 14 20 13 chrU 7770781 7770931 -2278106 + DMRT1B LINE R1 5033 5183 0 6 644 28 29 0 0 chrU 7771163 7771198 -2277839 + AT_rich Low_complexity Low_complexity 1 35 0 6 644 1782 209 146 27 chrU 7771452 7772067 -2276970 + IDEFIX_I LTR Gypsy 79 766 -4862 6 644 4651 142 91 1 chrU 7772105 7772934 -2276103 + IDEFIX_I LTR Gypsy 1924 2826 -2802 6 644 4515 195 25 28 chrU 7773049 7775199 -2273838 - SAR_DM Satellite Satellite -836 2144 1 6 644 237 119 24 0 chrU 7775406 7775448 -2273589 - NTS_DM Other Other -191 49 7 6 644 430 129 70 39 chrU 7775454 7775583 -2273454 - NTS_DM Other Other 0 240 108 6 644 871 108 0 0 chrU 7775591 7775721 -2273316 - NTS_DM Other Other -103 137 8 6 644 291 125 21 0 chrU 7775819 7775867 -2273170 - NTS_DM Other Other -191 49 1 6 644 1110 139 15 5 chrU 7775898 7776101 -2272936 - NTS_DM Other Other -35 205 1 6 644 234 167 21 0 chrU 7776130 7776178 -2272859 - NTS_DM Other Other -191 49 1 6 644 466 127 53 38 chrU 7776178 7776309 -2272728 - NTS_DM Other Other 0 240 108 6 644 853 115 0 0 chrU 7776317 7776447 -2272590 - NTS_DM Other Other -103 137 8 6 644 285 85 43 0 chrU 7776543 7776590 -2272447 - NTS_DM Other Other -191 49 1 6 644 1032 108 0 6 chrU 7776620 7776787 -2272250 - NTS_DM Other Other -67 173 8 6 644 295 106 21 0 chrU 7776885 7776932 -2272105 - NTS_DM Other Other -192 48 1 6 644 438 135 53 38 chrU 7776932 7777063 -2271974 - NTS_DM Other Other 0 240 108 6 644 819 123 0 0 chrU 7777071 7777201 -2271836 - NTS_DM Other Other -103 137 8 6 644 278 146 21 0 chrU 7777299 7777347 -2271690 - NTS_DM Other Other -191 49 1 6 644 398 126 34 11 chrU 7777378 7777466 -2271571 - NTS_DM Other Other -35 205 116 6 644 2374 28 3 3 chrU 7777568 7777851 -2271186 + PROTOP DNA P 4198 4480 0 6 644 30 27 0 0 chrU 7778224 7778261 -2270776 + AT_rich Low_complexity Low_complexity 1 37 0 6 644 23 68 0 0 chrU 7778307 7778351 -2270686 + AT_rich Low_complexity Low_complexity 1 44 0 6 644 21 89 0 0 chrU 7778389 7778445 -2270592 + AT_rich Low_complexity Low_complexity 1 56 0 6 644 1391 27 97 0 chrU 7779539 7779724 -2269313 + PROTOP_B DNA P 1 203 -950 6 644 1497 27 5 0 chrU 7781789 7781977 -2267060 - DM1731_LTR LTR Copia 0 336 148 6 644 3857 212 23 26 chrU 7782081 7784194 -2264843 - SAR_DM Satellite Satellite -242 2106 1 6 644 849 78 8 0 chrU 7784099 7784228 -2264809 + ARS406_DM Unknown Unknown 1 130 -223 6 644 1552 64 0 0 chrU 7784336 7784540 -2264497 - Gypsy12_I LTR Gypsy -2894 2652 2449 6 644 241 75 434 0 chrU 7784530 7784583 -2264454 - PROTOP_B DNA P -1077 76 1 6 644 21 89 0 0 chrU 7785665 7785721 -2263316 + AT_rich Low_complexity Low_complexity 1 56 0 6 644 23 68 0 0 chrU 7785759 7785803 -2263234 + AT_rich Low_complexity Low_complexity 1 44 0 6 644 29 60 0 0 chrU 7785849 7785899 -2263138 + AT_rich Low_complexity Low_complexity 1 50 0 6 644 1732 36 36 0 chrU 7786247 7786470 -2262567 - PROTOP DNA P 0 4480 4250 6 644 4778 28 0 0 chrU 7786570 7787149 -2261888 + R1_DM LINE R1 4778 5356 0 6 644 2993 74 5 5 chrU 7787183 7787602 -2261435 + R1_DM LINE R1 24 442 -4914 6 644 8849 29 25 2 chrU 7787603 7788709 -2260328 + R1_DM LINE R1 1255 2386 -2970 6 644 1442 155 135 53 chrU 7788831 7789268 -2259769 - Gypsy12A_LTR LTR Gypsy -989 1291 819 6 644 1638 201 45 18 chrU 7789301 7789850 -2259187 - Gypsy12A_LTR LTR Gypsy -1786 550 1 6 644 511 322 180 4 chrU 7789867 7790413 -2258624 + Ulysses_I LTR Gypsy 5202 5843 -538 6 644 348 236 103 49 chrU 7790443 7790666 -2258371 + Ulysses_I LTR Gypsy 5894 6128 -253 6 644 1001 75 0 0 chrU 7791046 7791193 -2257844 + ARS406_DM Unknown Unknown 43 189 -164 6 644 4021 194 36 24 chrU 7791091 7793175 -2255862 - SAR_DM Satellite Satellite -203 2109 1 6 644 7602 20 0 11 chrU 7793275 7794223 -2254814 + MICROPIA_I LTR Gypsy 3539 4476 0 6 644 3846 8 2 61 chrU 7794223 7794729 -2254308 + MICROPIA_LTR LTR Gypsy 1 476 0 6 644 29 60 0 0 chrU 7794729 7794779 -2254258 + AT_rich Low_complexity Low_complexity 1 50 0 6 644 21 89 0 0 chrU 7794817 7794873 -2254164 + AT_rich Low_complexity Low_complexity 1 56 0 6 644 3478 215 37 19 chrU 7795509 7797636 -2251401 - SAR_DM Satellite Satellite -689 2165 1 6 644 2382 32 196 0 chrU 7797736 7798322 -2250715 + DMCR1A LINE CR1 311 1011 -3459 6 644 3571 79 6 0 chrU 7798329 7798824 -2250213 - G5A_DM LINE Jockey -1716 1125 628 6 644 3905 201 26 27 chrU 7799963 7802088 -2246949 - SAR_DM Satellite Satellite -435 2123 1 6 644 2814 41 34 42 chrU 7802189 7802599 -2246438 - ROOA_I LTR Pao -5863 986 580 6 644 959 45 75 0 chrU 7802598 7802731 -2246306 - ROOA_I LTR Pao -6567 282 140 6 644 2259 40 78 21 chrU 7802761 7803095 -2245942 - ROOA_LTR LTR Pao 0 386 34 6 644 1918 65 92 7 chrU 7803573 7803866 -2245171 + Mariner2_DM DNA Tc1 175 492 -420 6 644 1017 47 0 0 chrU 7803866 7803995 -2245042 + PROTOP_A DNA P 1 129 -976 6 644 2145 60 3 6 chrU 7803993 7804309 -2244728 + PROTOP_A DNA P 303 617 -488 6 644 609 219 6 55 chrU 7804602 7804766 -2244271 - HETA LINE telomeric -1774 4307 4152 6 644 353 170 93 9 chrU 7804770 7804877 -2244160 - TAHRE LINE telomeric -3039 7424 7309 6 644 3228 48 8 12 chrU 7805094 7805775 -2243262 + PROTOP_A DNA P 489 1030 -75 6 644 1559 51 56 0 chrU 7805761 7805976 -2243061 - PROTOP DNA P -4253 227 1 6 644 658 214 6 54 chrU 7806317 7806485 -2242552 - HETA LINE telomeric -1770 4311 4152 6 644 3413 71 107 6 chrU 7806639 7807146 -2241891 + Gypsy12_I LTR Gypsy 4989 5546 0 6 644 401 117 12 72 chrU 7807145 7807223 -2241814 + Gypsy12_LTR LTR Gypsy 1 73 -2263 6 644 5004 17 53 3 chrU 7807223 7808275 -2240762 - PROTOP_A DNA P 0 1105 1 6 644 788 229 20 61 chrU 7808318 7808565 -2240472 + Gypsy12_LTR LTR Gypsy 297 533 -1803 6 644 273 298 0 11 chrU 7808659 7808754 -2240283 + Gypsy12_LTR LTR Gypsy 679 772 -1564 6 644 970 9 0 0 chrU 7808858 7808971 -2240066 - ACCORD2_I LTR Gypsy -6580 632 520 6 644 3147 15 7 34 chrU 7808970 7809379 -2239658 - ACCORD2_I LTR Gypsy -6814 398 1 6 644 1775 19 0 18 chrU 7809379 7809598 -2239439 - ACCORD2_LTR LTR Gypsy 0 215 1 6 644 5739 26 51 1 chrU 7809598 7810880 -2238157 - ACCORD2_I LTR Gypsy -11 7201 5856 6 644 790 11 0 0 chrU 7810878 7810973 -2238064 - ACCORD2_I LTR Gypsy -769 6443 6349 6 644 3741 9 0 0 chrU 7811073 7811508 -2237529 - DOC LINE Jockey -4259 466 32 6 644 4002 198 22 23 chrU 7811552 7813187 -2235850 + SAR_DM Satellite Satellite 1 1632 -216 6 644 3989 183 14 21 chrU 7813292 7814441 -2234596 - SAR_DM Satellite Satellite -313 1140 1 6 644 3951 175 10 20 chrU 7814466 7815396 -2233641 - SAR_DM Satellite Satellite -358 1114 195 6 644 4056 201 18 23 chrU 7815500 7817594 -2231443 - SAR_DM Satellite Satellite -264 2083 1 6 644 638 134 0 0 chrU 7817501 7817613 -2231424 + ARS406_DM Unknown Unknown 1 112 -241 6 644 3932 185 23 21 chrU 7817731 7819824 -2229213 + SAR_DM Satellite Satellite 1 2098 -208 6 644 1758 103 4 0 chrU 7819958 7820220 -2228817 + Gypsy12_I LTR Gypsy 741 1003 -4543 6 644 440 65 0 0 chrU 7820209 7820271 -2228766 + Gypsy12_I LTR Gypsy 5482 5543 -3 6 644 1582 137 4 25 chrU 7820275 7820553 -2228484 + Gypsy12_LTR LTR Gypsy 1 272 -2064 6 644 2289 25 93 0 chrU 7820553 7820874 -2228163 + DIVER2_LTR LTR Pao 1 351 -34 6 644 7423 47 10 25 chrU 7820873 7821908 -2227129 + DIVER2_I LTR Pao 1424 2442 -1705 6 644 938 48 0 0 chrU 7822139 7822264 -2226773 + ARS406_DM Unknown Unknown 65 189 -164 6 644 3723 215 20 27 chrU 7822185 7824247 -2224790 - SAR_DM Satellite Satellite -227 2047 1 6 644 2307 130 13 19 chrU 7824358 7826455 -2222582 + DMSAT6 Satellite Satellite 1 2085 -69 6 644 233 111 0 0 chrU 7826555 7826591 -2222446 - IDEFIX_I LTR Gypsy -739 4889 4854 6 644 2107 131 66 18 chrU 7826604 7827000 -2222037 - IDEFIX_I LTR Gypsy -1408 4220 3806 6 644 1320 131 65 11 chrU 7826979 7827241 -2221796 - IDEFIX_I LTR Gypsy -2195 3433 3158 6 644 2222 15 0 4 chrU 7827249 7827516 -2221521 + Invader2_LTR LTR Gypsy 1 266 0 6 644 9315 12 11 0 chrU 7827516 7828659 -2220378 + Invader2_I LTR Gypsy 1 1156 -3436 6 644 2657 22 0 0 chrU 7828760 7829083 -2219954 + STALKER4_I LTR Gypsy 5477 5799 -731 6 644 2418 94 34 14 chrU 7830965 7832350 -2216687 + DMSAT6 Satellite Satellite 1 1412 -18 6 644 2469 86 31 19 chrU 7832363 7833068 -2215969 + DMSAT6 Satellite Satellite 1 714 -80 6 644 1893 118 81 0 chrU 7833168 7833491 -2215546 + IDEFIX_I LTR Gypsy 3872 4220 -1408 6 644 1584 136 77 19 chrU 7833504 7833827 -2215210 + IDEFIX_I LTR Gypsy 4854 5195 -433 6 644 841 38 0 0 chrU 7833826 7833932 -2215105 - DMTOM1_LTR LTR Gypsy -304 106 1 6 644 597 186 16 0 chrU 7833932 7834048 -2214989 - ZAM_I LTR Gypsy -6843 647 530 6 644 225 312 24 93 chrU 7834074 7834321 -2214716 - ACCORD2_I LTR Gypsy -6457 755 526 6 644 21 82 0 0 chrU 7834416 7834465 -2214572 + AT_rich Low_complexity Low_complexity 1 49 0 6 644 22 35 0 0 chrU 7834588 7834617 -2214420 + AT_rich Low_complexity Low_complexity 1 29 0 6 644 4493 5 0 0 chrU 7835372 7835923 -2213114 - DM176_I LTR Gypsy -475 5945 5395 6 644 10431 4 10 6 chrU 7835918 7837190 -2211847 - DM176_I LTR Gypsy -1142 5278 4001 6 644 2455 7 0 0 chrU 7837183 7837470 -2211567 - DM176_I LTR Gypsy -2753 3667 3381 6 644 361 204 117 0 chrU 7837895 7837998 -2211039 - HMSBEAGLE_I LTR Gypsy -692 5837 5723 6 644 3316 20 0 2 chrU 7837999 7838402 -2210635 + STALKER4_LTR LTR Gypsy 1 402 0 6 644 1624 194 0 0 chrU 7838429 7838748 -2210289 - ROVER-I_DM LTR Gypsy -2475 4109 3791 6 644 3120 10 0 0 chrU 7838751 7839137 -2209900 + STALKER4_I LTR Gypsy 3246 3631 -2899 6 644 996 25 0 0 chrU 7839140 7839258 -2209779 + STALKER4_I LTR Gypsy 4084 4201 -2329 6 644 1685 129 25 0 chrU 7839251 7839529 -2209508 - MAX_LTR LTR Pao -36 285 1 6 644 887 64 107 0 chrU 7839529 7839669 -2209368 - MAX_I LTR Pao 0 7914 7760 6 644 4625 32 37 3 chrU 7839769 7840393 -2208644 + PROTOP_A DNA P 461 1105 0 6 644 26 30 0 0 chrU 7840770 7840803 -2208234 + AT_rich Low_complexity Low_complexity 1 33 0 6 644 3283 23 0 0 chrU 7840853 7841246 -2207791 - Invader6_LTR LTR Gypsy 0 393 1 6 644 4014 12 94 88 chrU 7841248 7841864 -2207173 - Invader6_I LTR Gypsy -2 4097 3478 6 644 3951 201 24 25 chrU 7841975 7844061 -2204976 + SAR_DM Satellite Satellite 1 2083 -208 6 644 1381 48 48 0 chrU 7844161 7844350 -2204687 - G2_DM LINE Jockey -436 2666 2469 6 644 22 56 0 0 chrU 7844494 7844530 -2204507 + AT_rich Low_complexity Low_complexity 1 36 0 6 644 7635 104 10 7 chrU 7844693 7846255 -2202782 + G2_DM LINE Jockey 2085 4193 -153 6 644 4089 202 18 29 chrU 7846355 7848449 -2200588 - SAR_DM Satellite Satellite -315 2072 1 6 644 4280 80 99 8 chrU 7848549 7849202 -2199835 + Gypsy12_I LTR Gypsy 4834 5546 0 6 644 438 196 8 51 chrU 7849203 7849317 -2199720 + Gypsy12_LTR LTR Gypsy 1 109 -2227 6 644 8894 27 0 0 chrU 7849317 7850422 -2198615 + PROTOP_A DNA P 1 1105 0 6 644 984 200 14 9 chrU 7850424 7850641 -2198396 + Gypsy12_LTR LTR Gypsy 105 322 -2014 6 644 10772 4 1 0 chrU 7850741 7851998 -2197039 - DMRT1A LINE R1 -2864 2319 1062 6 644 1838 34 4 0 chrU 7851978 7852215 -2196822 - ACCORD_LTR LTR Gypsy -320 238 1 6 644 519 90 0 196 chrU 7852579 7852717 -2196320 + DNAREP1_DM LINE Penelope 475 585 -9 6 644 21 0 0 0 chrU 7852802 7852823 -2196214 + AT_rich Low_complexity Low_complexity 1 21 0 6 644 4001 190 18 30 chrU 7852934 7855020 -2194017 - SAR_DM Satellite Satellite -416 2060 1 6 644 1878 39 4 30 chrU 7856641 7856907 -2192130 + BATUMI_I LTR Pao 7002 7260 -703 6 644 2127 82 3 7 chrU 7856903 7857208 -2191829 + BATUMI_I LTR Pao 3550 3853 -4110 6 644 4095 66 23 16 chrU 7857310 7858037 -2191000 + PROTOP_A DNA P 428 1153 0 6 644 3080 190 58 116 chrU 7858055 7859316 -2189721 - Gypsy12A_LTR LTR Gypsy -632 1648 501 6 644 798 168 6 0 chrU 7859496 7859657 -2189380 + SAR_DM Satellite Satellite 604 765 -707 6 644 2730 30 0 0 chrU 7859656 7859992 -2189045 + DM1731_LTR LTR Copia 1 336 0 6 644 3977 197 21 26 chrU 7859991 7860047 -2188990 + SAR_DM Satellite Satellite 1 61 -2376 6 644 1050 87 0 0 chrU 7860047 7860208 -2188829 - ARS406_DM Unknown Unknown -164 189 29 6 644 3977 197 21 26 chrU 7860208 7861582 -2187455 + SAR_DM Satellite Satellite 62 1582 -855 6 644 26 30 0 0 chrU 7861799 7861832 -2187205 + AT_rich Low_complexity Low_complexity 1 33 0 6 644 955 43 0 0 chrU 7862182 7862298 -2186739 - PROTOP DNA P 0 4480 4365 6 644 4234 56 42 8 chrU 7862290 7862916 -2186121 - PROTOP DNA P -3833 647 1 6 644 2170 14 0 7 chrU 7863880 7864158 -2184879 + Copia_LTR LTR Copia 1 276 0 6 645 437 119 35 23 chrU 7864439 7864525 -2184512 - NTS_DM Other Other -150 90 4 6 645 613 22 0 32 chrU 7864635 7864730 -2184307 - NTS_DM Other Other -78 162 71 6 645 1565 34 21 21 chrU 7864766 7865006 -2184031 - NTS_DM Other Other 0 240 1 6 645 1703 30 17 17 chrU 7865006 7865246 -2183791 - NTS_DM Other Other 0 240 1 6 645 1740 17 17 17 chrU 7865246 7865486 -2183551 - NTS_DM Other Other 0 240 1 6 645 1621 38 17 17 chrU 7865488 7865726 -2183311 - NTS_DM Other Other -2 238 1 6 645 1595 27 18 18 chrU 7865726 7865954 -2183083 - NTS_DM Other Other 0 240 13 6 645 16017 43 5 2 chrU 7866054 7868125 -2180912 + G2_DM LINE Jockey 1026 3102 0 6 645 2573 88 39 16 chrU 7868238 7869484 -2179553 + DMSAT6 Satellite Satellite 1 1274 -141 6 645 2313 98 20 36 chrU 7869509 7870322 -2178715 + DMSAT6 Satellite Satellite 1 800 0 6 645 3694 98 16 31 chrU 7870422 7871030 -2178007 + TART LINE telomeric 10065 10663 -3814 6 645 1282 58 78 0 chrU 7871034 7871240 -2177797 + HETRP_DM Satellite Satellite 724 945 -927 6 645 3770 34 19 24 chrU 7871359 7872006 -2177031 + HETRP_DM Satellite Satellite 1 643 -1280 6 645 2604 27 11 26 chrU 7872125 7872504 -2176533 + HETRP_DM Satellite Satellite 130 502 -1370 6 645 2778 14 3 0 chrU 7873368 7873724 -2175313 - Invader2_I LTR Gypsy -4235 357 1 6 645 2222 15 0 4 chrU 7873724 7873991 -2175046 - Invader2_LTR LTR Gypsy 0 266 1 6 645 1320 131 65 11 chrU 7873999 7874261 -2174776 + IDEFIX_I LTR Gypsy 3158 3433 -2195 6 645 2107 131 66 18 chrU 7874240 7874636 -2174401 + IDEFIX_I LTR Gypsy 3806 4220 -1408 6 645 233 111 0 0 chrU 7874649 7874685 -2174352 + IDEFIX_I LTR Gypsy 4854 4889 -739 6 645 3874 204 33 27 chrU 7874789 7876828 -2172209 + SAR_DM Satellite Satellite 1 2051 -203 6 645 885 55 39 0 chrU 7876736 7876864 -2172173 - ARS406_DM Unknown Unknown -164 189 57 6 645 4072 188 26 29 chrU 7876966 7879027 -2170010 - SAR_DM Satellite Satellite -291 2053 1 6 645 3939 184 40 30 chrU 7879143 7881216 -2167821 - SAR_DM Satellite Satellite -443 2095 1 6 645 5058 2 0 2 chrU 7881321 7881911 -2167126 - QUASIMODO_LTR LTR Gypsy -68 590 2 6 645 244 0 56 0 chrU 7881911 7881947 -2167090 + (TA)n Simple_repeat Simple_repeat 1 38 0 6 645 3055 97 79 2 chrU 7881947 7882476 -2166561 + DM297_I LTR Gypsy 1469 2038 -4129 6 645 5901 57 16 1 chrU 7882476 7883246 -2165791 + BS LINE Jockey 2651 3431 -1695 6 645 1144 69 0 6 chrU 7883237 7883397 -2165640 + Invader2_LTR LTR Gypsy 12 170 -96 6 645 3934 14 0 0 chrU 7883497 7883989 -2165048 - ROO_I LTR Pao -3057 5199 4708 6 645 3503 18 43 64 chrU 7883989 7884475 -2164562 - MICROPIA_LTR LTR Gypsy 0 476 1 6 645 4458 14 106 7 chrU 7884475 7885068 -2163969 - MICROPIA_I LTR Gypsy 0 4476 3825 6 645 4268 8 0 0 chrU 7885068 7885563 -2163474 - GTWIN_LTR LTR Gypsy 0 495 1 6 645 5746 18 28 0 chrU 7885669 7886361 -2162676 + R1_DM LINE R1 1714 2425 -2931 6 645 1794 9 0 18 chrU 7886361 7886580 -2162457 + ACCORD2_LTR LTR Gypsy 1 215 0 6 645 8288 18 35 13 chrU 7886580 7887641 -2161396 + ACCORD2_I LTR Gypsy 1 1084 -6128 6 645 777 11 0 10 chrU 7887641 7887737 -2161300 - MICROPIA_LTR LTR Gypsy 0 476 382 6 645 4716 6 6 0 chrU 7887837 7888368 -2160669 - DM1731_I LTR Copia -187 3789 3256 6 645 13553 6 24 0 chrU 7888371 7889901 -2159136 - DM1731_I LTR Copia -882 3094 1528 6 645 589 280 97 41 chrU 7890001 7890392 -2158645 - SAR_DM Satellite Satellite -485 987 575 6 645 427 310 38 23 chrU 7890287 7890551 -2158486 + XDMR_DM Unknown Unknown 6 273 -87 6 645 1195 277 20 18 chrU 7890539 7891043 -2157994 - SAR_DM Satellite Satellite -722 750 246 6 645 306 281 13 27 chrU 7891058 7891208 -2157829 + XDMR_DM Unknown Unknown 204 351 -9 6 645 1308 282 50 53 chrU 7891095 7891828 -2157209 - SAR_DM Satellite Satellite -314 1158 428 6 645 450 300 44 27 chrU 7891579 7891877 -2157160 + XDMR_DM Unknown Unknown 6 308 -52 6 645 378 297 38 16 chrU 7891874 7892059 -2156978 + XDMR Unknown Unknown 1 189 -172 6 645 5706 229 50 60 chrU 7892164 7894079 -2154958 - Gypsy12_LTR LTR Gypsy -439 1897 1 6 645 279 276 0 0 chrU 7894092 7894179 -2154858 - TOM_I LTR Gypsy -2750 3362 3276 6 645 269 122 0 0 chrU 7894186 7894227 -2154810 - Gypsy12_I LTR Gypsy -4570 976 936 6 645 2044 251 7 0 chrU 7894327 7894876 -2154161 + DM297_I LTR Gypsy 3784 4336 -1831 6 645 774 126 19 6 chrU 7894867 7895027 -2154010 + DM297_I LTR Gypsy 4573 4734 -1433 6 645 455 201 2 39 chrU 7895002 7895121 -2153916 + DM176_I LTR Gypsy 5722 5823 -597 6 645 489 150 25 0 chrU 7895233 7895313 -2153724 + DM176_LTR LTR Gypsy 130 211 -296 6 645 477 177 36 114 chrU 7895305 7895445 -2153592 + DM176_LTR LTR Gypsy 166 294 -213 6 645 293 203 43 0 chrU 7895569 7895638 -2153399 + DM176_LTR LTR Gypsy 295 366 -141 6 645 614 156 40 16 chrU 7895655 7895779 -2153258 + DMTOM1_LTR LTR Gypsy 284 410 0 6 645 403 86 14 54 chrU 7895779 7895844 -2153193 + DMTOM1_LTR LTR Gypsy 349 410 0 6 645 610 94 51 20 chrU 7895850 7895948 -2153089 - MDG1_I LTR Gypsy -5818 778 678 6 645 2408 126 93 5 chrU 7895953 7896385 -2152652 - MDG1_I LTR Gypsy -6111 485 16 6 645 3075 9 0 0 chrU 7896489 7896834 -2152203 - Copia2_I LTR Copia -3666 496 152 6 645 363 281 0 26 chrU 7896894 7897011 -2152026 - Copia2_I LTR Copia -3482 680 567 6 645 1070 77 0 12 chrU 7897769 7897941 -2151096 + (TTA)n Simple_repeat Simple_repeat 3 172 0 6 645 264 0 107 0 chrU 7897956 7898012 -2151025 + (TTA)n Simple_repeat Simple_repeat 3 64 0 6 645 183 0 24 98 chrU 7898010 7898051 -2150986 + (TAA)n Simple_repeat Simple_repeat 3 40 0 6 645 586 61 44 29 chrU 7898049 7898185 -2150852 + (TTA)n Simple_repeat Simple_repeat 2 139 0 6 645 1275 62 0 0 chrU 7898185 7898363 -2150674 + (TAA)n Simple_repeat Simple_repeat 3 180 0 6 645 866 260 13 13 chrU 7898652 7898952 -2150085 - XDMR_DM Unknown Unknown -43 317 18 6 645 4206 212 32 25 chrU 7898696 7900709 -2148328 + SAR_DM Satellite Satellite 1 2025 -216 6 645 2677 99 29 22 chrU 7900809 7902869 -2146168 + DMSAT6 Satellite Satellite 1 2074 -29 6 645 10257 4 2 25 chrU 7902969 7903669 -2145368 - DM176_I LTR Gypsy -5202 1218 538 6 645 208 28 26 53 chrU 7903669 7903707 -2145330 + (TTA)n Simple_repeat Simple_repeat 3 39 0 6 645 10257 4 2 25 chrU 7903707 7904252 -2144785 - DM176_I LTR Gypsy -5883 537 1 6 645 4136 18 20 0 chrU 7904252 7904749 -2144288 - DM176_LTR LTR Gypsy 0 507 1 6 645 520 47 0 232 chrU 7904751 7904863 -2144174 + DNAREP1_DM LINE Penelope 500 585 -9 6 645 21 0 0 0 chrU 7904948 7904969 -2144068 + AT_rich Low_complexity Low_complexity 1 21 0 6 645 16706 33 15 1 chrU 7905128 7907178 -2141859 - IDEFIX_I LTR Gypsy -2676 2952 875 6 645 4273 41 0 0 chrU 7907278 7907794 -2141243 + STALKER4_I LTR Gypsy 4257 4772 -1758 6 645 2648 79 8 41 chrU 7907792 7909324 -2139713 + DMSAT6 Satellite Satellite 1 1481 -29 6 645 2941 22 11 8 chrU 7909424 7909792 -2139245 - BATUMI_I LTR Pao -1168 6795 6427 6 645 5634 16 0 5 chrU 7909810 7910479 -2138558 + BATUMI_I LTR Pao 7298 7963 0 6 645 2146 39 3 30 chrU 7910479 7910771 -2138266 + BATUMI_I LTR Pao 7002 7285 -678 6 645 25 0 0 0 chrU 7910789 7910814 -2138223 + AT_rich Low_complexity Low_complexity 1 25 0 6 645 3946 222 22 27 chrU 7911569 7913612 -2135425 - SAR_DM Satellite Satellite -1087 2033 1 6 645 2434 25 3 0 chrU 7913716 7914000 -2135037 - DM176_I LTR Gypsy -6135 285 1 6 645 2903 51 61 76 chrU 7914000 7914501 -2134536 - DM176_LTR LTR Gypsy -27 480 1 6 645 1246 152 60 145 chrU 7914509 7914910 -2134127 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 645 309 288 43 14 chrU 7914941 7915082 -2133955 - Gypsy11_LTR LTR Gypsy -207 245 101 6 645 230 171 71 95 chrU 7915076 7915160 -2133877 - TABOR_LTR LTR Gypsy -422 84 3 6 645 40 21 0 0 chrU 7915171 7915218 -2133819 + AT_rich Low_complexity Low_complexity 1 47 0 6 645 4182 173 140 22 chrU 7915856 7917006 -2132031 - TART LINE telomeric -4309 10168 8937 6 645 22 56 0 0 chrU 7917158 7917194 -2131843 + AT_rich Low_complexity Low_complexity 1 36 0 6 645 341 176 42 85 chrU 7917239 7917357 -2131680 + Copia_I LTR Copia 4401 4513 -80 6 645 887 60 0 0 chrU 7917995 7918112 -2130925 + ARS406_DM Unknown Unknown 73 189 -164 6 645 4388 193 21 28 chrU 7918009 7920028 -2129009 - SAR_DM Satellite Satellite -203 2005 1 6 645 2889 47 58 80 chrU 7920128 7920628 -2128409 + DM176_LTR LTR Gypsy 7 481 -26 6 645 1410 57 6 0 chrU 7920645 7920822 -2128215 - Baggins1 LINE LOA -2928 2525 2348 6 645 1159 84 0 6 chrU 7920833 7920989 -2128048 - Baggins1 LINE LOA -3294 2159 2005 6 645 4369 218 92 7 chrU 7921001 7922161 -2126876 + Stalker2_I LTR Gypsy 3420 4678 -2724 6 645 1654 30 0 0 chrU 7922261 7922460 -2126577 - IDEFIX_I LTR Gypsy -5429 199 1 6 645 3323 52 28 9 chrU 7922963 7923499 -2125538 - IDEFIX_LTR LTR Gypsy 0 594 1 6 645 270 100 0 0 chrU 7923467 7923507 -2125530 + BARI1 DNA Tc1 3 42 -1708 6 645 46 0 0 0 chrU 7924655 7924701 -2124336 + AT_rich Low_complexity Low_complexity 1 46 0 6 645 37 81 0 0 chrU 7924806 7924892 -2124145 + AT_rich Low_complexity Low_complexity 1 86 0 6 645 1507 273 112 26 chrU 7925026 7925785 -2123252 - Copia_I LTR Copia -494 4099 3276 6 645 2827 221 98 6 chrU 7925778 7926424 -2122613 + HMSBEAGLE_I LTR Gypsy 2518 3222 -3307 6 645 8671 3 1 1 chrU 7926524 7927526 -2121511 + MDG3_I LTR Gypsy 3985 4986 0 6 645 2259 19 0 15 chrU 7927526 7927797 -2121240 + MDG3_LTR LTR Gypsy 1 267 0 6 645 3903 11 0 16 chrU 7927797 7928243 -2120794 - Gypsy2_I LTR Gypsy -797 5338 4900 6 645 39 0 0 0 chrU 7928273 7928312 -2120725 + AT_rich Low_complexity Low_complexity 1 39 0 6 645 2173 4 0 0 chrU 7928312 7928551 -2120486 - Gypsy2_I LTR Gypsy -1243 4892 4654 6 645 418 224 269 0 chrU 7928833 7928967 -2120070 + Invader1_I LTR Gypsy 957 1126 -2060 6 645 304 265 0 0 chrU 7929121 7929204 -2119833 + MICROPIA_I LTR Gypsy 1528 1610 -2866 6 645 234 139 0 44 chrU 7929222 7929267 -2119770 + Invader5_I LTR Gypsy 1981 2023 -1311 6 645 2327 144 234 144 chrU 7929267 7930246 -2118791 + Invader5_I LTR Gypsy 1788 2854 -480 6 645 344 143 512 106 chrU 7930272 7930432 -2118605 + Invader5_I LTR Gypsy 2821 3045 -289 6 645 787 116 0 0 chrU 7930481 7930593 -2118444 + Invader5_LTR LTR Gypsy 121 232 -120 6 645 4735 196 20 31 chrU 7930775 7932796 -2116241 - SAR_DM Satellite Satellite -471 1998 1 6 645 5325 51 54 0 chrU 7932896 7933577 -2115460 - Baggins1 LINE LOA -3883 1570 853 6 645 3470 53 108 2 chrU 7933578 7934051 -2114986 - Baggins1 LINE LOA -4895 558 36 6 645 306 160 0 0 chrU 7934075 7934125 -2114912 - DNAREP1_DM LINE Penelope -509 85 36 6 645 1620 0 0 0 chrU 7934290 7934916 -2114121 + (GAGAA)n Simple_repeat Simple_repeat 1 626 0 6 645 713 11 11 0 chrU 7935017 7935104 -2113933 + QUASIMODO_LTR LTR Gypsy 571 658 0 6 645 2539 41 3 9 chrU 7935105 7935427 -2113610 + PROTOP_A DNA P 701 1020 -85 6 645 4224 48 0 9 chrU 7935438 7935966 -2113071 + DIVER2_I LTR Pao 995 1517 -2630 6 645 4990 31 17 2 chrU 7936311 7936902 -2112135 + DIVER2_I LTR Pao 3195 3794 -353 6 645 3763 211 51 18 chrU 7937133 7939146 -2109891 - SAR_DM Satellite Satellite -219 2079 1 6 645 1984 43 8 45 chrU 7939355 7939623 -2109414 - BLOOD_LTR LTR Gypsy -141 258 1 6 645 2036 24 0 42 chrU 7939623 7939883 -2109154 + QUASIMODO_LTR LTR Gypsy 410 658 0 6 645 3654 29 5 0 chrU 7939891 7940312 -2108725 + Invader1_LTR LTR Gypsy 1 423 0 6 645 1278 66 42 8 chrU 7940312 7940588 -2108449 - ZAM_I LTR Gypsy -6994 496 2 6 645 316 0 0 0 chrU 7940745 7940782 -2108255 - Baggins1 LINE LOA -5416 37 1 6 645 4046 206 27 22 chrU 7941357 7943363 -2105674 - SAR_DM Satellite Satellite -589 2015 1 6 645 1933 244 133 11 chrU 7943466 7944377 -2104660 - BS2 LINE Jockey -2802 1919 898 6 645 5123 139 88 1 chrU 7944426 7945397 -2103640 + Gypsy_I LTR Gypsy 2956 4457 -3065 6 645 392 184 13 0 chrU 7945398 7945474 -2103563 + Gypsy_I LTR Gypsy 4425 4501 -2006 6 645 1554 72 6 10 chrU 7945574 7946390 -2102647 + (CTATT)n Simple_repeat Simple_repeat 1 812 0 6 645 1303 83 5 13 chrU 7946403 7947192 -2101845 + (CTATT)n Simple_repeat Simple_repeat 1 782 0 6 645 1239 90 8 20 chrU 7947220 7947577 -2101460 + (CTATT)n Simple_repeat Simple_repeat 1 352 0 6 645 3885 218 38 22 chrU 7947684 7949686 -2099351 - SAR_DM Satellite Satellite -425 2032 1 6 645 288 240 0 26 chrU 7950279 7950356 -2098681 + BS2 LINE Jockey 4149 4223 -498 6 645 239 0 0 31 chrU 7951215 7951247 -2097790 + (TTA)n Simple_repeat Simple_repeat 2 32 0 6 645 1177 138 11 5 chrU 7951298 7951488 -2097549 - DNAREP1_DM LINE Penelope -358 236 46 6 645 1241 20 0 0 chrU 7951894 7952041 -2096996 + DM176_LTR LTR Gypsy 361 507 0 6 645 15194 17 11 8 chrU 7952041 7953896 -2095141 + DM176_I LTR Gypsy 1 1861 -4559 6 645 26 30 0 0 chrU 7955189 7955222 -2093815 + AT_rich Low_complexity Low_complexity 1 33 0 6 645 262 285 94 35 chrU 7955825 7955996 -2093041 - Gypsy6_I LTR Gypsy -2298 4714 4534 6 645 11161 19 0 1 chrU 7956100 7957436 -2091601 + Invader2_I LTR Gypsy 2363 3697 -895 6 645 1683 16 407 0 chrU 7957431 7957657 -2091380 + Invader2_I LTR Gypsy 3650 3967 -625 6 645 270 100 0 0 chrU 7957655 7957695 -2091342 + Invader2_LTR LTR Gypsy 227 266 0 6 645 1052 82 301 5 chrU 7957695 7957894 -2091143 - G5_DM LINE Jockey -125 4731 4473 6 645 25 75 0 0 chrU 7957928 7957981 -2091056 + AT_rich Low_complexity Low_complexity 1 53 0 6 645 239 146 0 68 chrU 7958038 7958097 -2090940 + TLD2 Unknown Unknown 44 98 -120 6 645 4907 7 0 3 chrU 7958201 7958785 -2090252 - I_DM LINE I -5567 664 83 6 645 2945 166 51 86 chrU 7958766 7959685 -2089352 - HETA LINE telomeric -5194 887 1 6 645 3019 134 4 10 chrU 7959695 7960199 -2088838 - TAHRE LINE telomeric -9 10454 9954 6 645 830 81 0 16 chrU 7960302 7960427 -2088610 + ARS406_DM Unknown Unknown 67 189 -164 6 645 4413 197 22 28 chrU 7960344 7961737 -2087300 - SAR_DM Satellite Satellite -225 1384 1 6 645 4660 6 0 4 chrU 7961758 7962297 -2086740 - DOC LINE Jockey -3 4722 4186 6 645 5035 8 141 8 chrU 7962397 7963185 -2085852 - STALKER4_I LTR Gypsy -1496 5034 4142 6 645 1266 0 0 7 chrU 7963196 7963345 -2085692 - STALKER4_I LTR Gypsy -2820 3710 3563 6 645 8746 25 0 9 chrU 7963345 7964395 -2084642 - PROTOP_A DNA P 0 1105 65 6 645 4021 196 27 22 chrU 7964495 7965657 -2083380 - SAR_DM Satellite Satellite -468 1168 1 6 645 3298 203 9 17 chrU 7965673 7966490 -2082547 - SAR_DM Satellite Satellite -396 1076 267 6 645 4406 195 20 29 chrU 7966590 7968582 -2080455 - SAR_DM Satellite Satellite -372 1975 1 6 645 388 279 107 89 chrU 7968808 7969088 -2079949 + Invader1_LTR LTR Gypsy 84 368 -55 6 645 237 109 21 21 chrU 7969637 7969684 -2079353 - HMSBEAGLE_I LTR Gypsy -6308 221 175 6 645 414 62 0 15 chrU 7969706 7969772 -2079265 - HMSBEAGLE_I LTR Gypsy -6464 65 1 6 645 703 275 35 38 chrU 7969771 7970032 -2079005 - DMLTR5 LTR Gypsy 0 266 7 6 645 333 278 120 87 chrU 7970154 7970430 -2078607 + Invader1_LTR LTR Gypsy 84 368 -55 6 645 6608 73 36 0 chrU 7970773 7971663 -2077374 + TART_B1 LINE telomeric 2604 3525 -7129 6 645 3725 115 47 0 chrU 7971657 7972215 -2076822 + TART_B1 LINE telomeric 4319 4902 -5752 6 645 3322 110 45 0 chrU 7972209 7972747 -2076290 + TART LINE telomeric 718 1279 -13198 6 645 12442 36 33 1 chrU 7972863 7974851 -2074186 - DIVER_I LTR Pao -422 5221 3169 6 645 4057 214 24 27 chrU 7974952 7976937 -2072100 + SAR_DM Satellite Satellite 1 1979 -216 6 645 1986 48 128 84 chrU 7977037 7977381 -2071656 - ROOA_I LTR Pao -1142 5707 5349 6 645 236 139 0 0 chrU 7977569 7977605 -2071432 - ROOA_I LTR Pao -1246 5603 5568 6 645 2288 132 12 15 chrU 7977737 7978122 -2070915 - ROOA_I LTR Pao -1503 5346 5076 6 645 2102 72 116 3 chrU 7978122 7978438 -2070599 - TRANSIB2 DNA Transib 0 2844 2493 6 645 1976 58 19 4 chrU 7978438 7978700 -2070337 + Invader2_LTR LTR Gypsy 1 266 0 6 645 2203 25 168 3 chrU 7978701 7979023 -2070014 + Invader2_I LTR Gypsy 2 376 -4216 6 645 1105 68 0 0 chrU 7979123 7979271 -2069766 - ARS406_DM Unknown Unknown -205 148 1 6 645 4472 208 28 22 chrU 7979175 7981101 -2067936 + SAR_DM Satellite Satellite 1 1938 -224 6 645 4411 200 21 31 chrU 7981203 7983155 -2065882 + SAR_DM Satellite Satellite 1 1933 -203 6 645 432 200 9 18 chrU 7983069 7983181 -2065856 - XDMR_DM Unknown Unknown 0 360 250 6 645 292 154 0 0 chrU 7983281 7983333 -2065704 + DM297_I LTR Gypsy 5630 5681 -486 6 645 942 119 0 0 chrU 7983332 7983475 -2065562 + DM176_I LTR Gypsy 6278 6420 0 6 645 249 215 11 151 chrU 7983531 7983624 -2065413 + DM176_LTR LTR Gypsy 190 269 -238 6 645 260 194 75 0 chrU 7983732 7983799 -2065238 + DM176_LTR LTR Gypsy 295 366 -141 6 645 589 156 40 16 chrU 7983816 7983940 -2065097 + DMTOM1_LTR LTR Gypsy 284 410 0 6 645 415 100 14 28 chrU 7983940 7984003 -2065034 + DMTOM1_LTR LTR Gypsy 349 410 0 6 645 2543 90 14 8 chrU 7984003 7984360 -2064677 + STALKER4_I LTR Gypsy 3795 4153 -2377 6 645 1859 136 38 2 chrU 7984358 7984705 -2064332 + STALKER4_I LTR Gypsy 4526 5130 -1767 6 645 3368 97 25 0 chrU 7984722 7985209 -2063828 + STALKER4_I LTR Gypsy 5421 5919 -611 6 645 458 334 48 40 chrU 7985456 7985985 -2063052 - Gypsy6_I LTR Gypsy -5231 1781 1437 6 645 3247 12 129 0 chrU 7986908 7987333 -2061704 - QUASIMODO_I LTR Gypsy -1026 5034 4555 6 645 4097 93 16 2 chrU 7987433 7988056 -2060981 + IDEFIX_I LTR Gypsy 4997 5628 0 6 645 4297 27 82 2 chrU 7988056 7988606 -2060431 + IDEFIX_LTR LTR Gypsy 1 594 0 6 645 1923 11 130 5 chrU 7988611 7988987 -2060050 + Invader1_LTR LTR Gypsy 1 423 0 6 645 3691 19 0 0 chrU 7988987 7989408 -2059629 + Invader1_I LTR Gypsy 1 421 -2765 6 645 2781 81 91 0 chrU 7990044 7990581 -2058456 + PROTOP DNA P 2616 3201 -1279 6 645 4473 197 20 28 chrU 7991585 7993551 -2055486 - SAR_DM Satellite Satellite -361 1951 1 6 80 15101 47 51 2 chrU 7993652 7995618 -2053419 - IDEFIX_I LTR Gypsy -2557 3071 1009 6 646 262 330 25 86 chrU 7996500 7996745 -2052292 - ACCORD2_I LTR Gypsy -6457 755 526 6 646 548 341 9 11 chrU 7997408 7997684 -2051353 - MICROPIA_I LTR Gypsy -583 3893 3347 6 646 2597 10 3 0 chrU 7997784 7998079 -2050958 - Gypsy12_LTR LTR Gypsy -2040 296 1 6 646 2470 52 0 5 chrU 7998079 7998405 -2050632 - Gypsy6A_LTR LTR Gypsy -12 408 1 6 646 263 191 290 57 chrU 7998405 7998575 -2050462 + DNAREP1_DM LINE Penelope 59 269 -325 6 646 455 79 0 0 chrU 7999687 7999750 -2049287 + G3_DM LINE Jockey 103 165 -4440 6 646 1303 7 0 0 chrU 7999850 8000000 -2049037 - ROO_I LTR Pao -8035 221 72 6 646 654 0 0 0 chrU 8000000 8000071 -2048966 - ROO_I LTR Pao -8185 71 1 6 646 3892 5 0 0 chrU 8000071 8000499 -2048538 - ROO_LTR LTR Pao 0 428 1 6 646 2956 6 0 9 chrU 8001465 8001815 -2047222 - LINEJ1_DM LINE Jockey 0 5020 4674 6 646 4516 17 2 0 chrU 8001915 8002435 -2046602 + DMRT1B LINE R1 4663 5183 0 6 646 2422 40 59 0 chrU 8002440 8002744 -2046293 - Invader4_I LTR Gypsy -838 1575 1254 6 646 5319 58 56 6 chrU 8002732 8003708 -2045329 - Invader4_I LTR Gypsy -1388 1025 1 6 646 914 62 0 0 chrU 8003708 8003820 -2045217 - Invader4_LTR LTR Gypsy 0 346 235 6 646 655 12 12 12 chrU 8003979 8004064 -2044973 + ARS406_DM Unknown Unknown 104 188 -165 6 646 4384 198 22 32 chrU 8004001 8005905 -2043132 - SAR_DM Satellite Satellite -242 1885 1 6 646 834 264 27 13 chrU 8005641 8005940 -2043097 + XDMR_DM Unknown Unknown 6 308 -52 6 646 5354 2 2 0 chrU 8006043 8006632 -2042405 + LSU-rRNA_Dme rRNA rRNA 2028 2617 -1283 6 646 2563 7 0 0 chrU 8006627 8006909 -2042128 + R1_DM LINE R1 5075 5356 0 6 646 10038 2 1 0 chrU 8006907 8008006 -2041031 + LSU-rRNA_Dme rRNA rRNA 2640 3739 -161 6 646 3200 38 18 3 chrU 8008106 8008715 -2040322 + MDG3_I LTR Gypsy 4300 4986 0 6 646 1973 27 33 52 chrU 8008715 8008987 -2040050 + MDG3_LTR LTR Gypsy 1 267 0 6 646 291 298 17 17 chrU 8009146 8009262 -2039775 + Invader5_I LTR Gypsy 175 290 -3044 6 646 617 324 29 14 chrU 8009475 8009823 -2039214 + MICROPIA_I LTR Gypsy 907 1259 -3217 6 646 453 353 0 0 chrU 8009834 8010052 -2038985 + MICROPIA_I LTR Gypsy 1336 1553 -2923 6 646 5774 108 44 105 chrU 8012230 8013587 -2035450 - BATUMI_I LTR Pao -6688 1275 1 6 646 479 18 0 0 chrU 8013587 8013644 -2035393 - BATUMI_I LTR Pao -679 7284 7228 6 646 4333 44 25 7 chrU 8013642 8014191 -2034846 - BATUMI_I LTR Pao -6010 1953 1395 6 646 6066 73 111 68 chrU 8014292 8015379 -2033658 + PROTOP_B DNA P 20 1153 0 6 646 26 30 0 0 chrU 8015756 8015789 -2033248 + AT_rich Low_complexity Low_complexity 1 33 0 6 646 3077 13 2 82 chrU 8015838 8016253 -2032784 + MICROPIA_LTR LTR Gypsy 93 474 -2 6 646 3331 67 116 0 chrU 8016353 8017175 -2031862 - ACCORD2_I LTR Gypsy -365 6847 5931 6 646 1099 37 0 0 chrU 8017212 8017348 -2031689 - ACCORD2_I LTR Gypsy -2419 4793 4658 6 646 1368 49 76 0 chrU 8017371 8017552 -2031485 - ACCORD2_I LTR Gypsy -2746 4466 4272 6 646 1482 55 0 0 chrU 8017552 8017733 -2031304 - PROTOP DNA P 0 4480 4300 6 646 314 158 40 0 chrU 8017729 8017805 -2031232 - PROTOP DNA P -4220 260 182 6 646 44 0 0 0 chrU 8018068 8018112 -2030925 + AT_rich Low_complexity Low_complexity 1 44 0 6 646 534 319 81 65 chrU 8018446 8019150 -2029887 + BLASTOPIA_I LTR Gypsy 2178 2892 -1589 6 646 240 253 30 50 chrU 8019280 8019380 -2029657 + BLASTOPIA_I LTR Gypsy 3263 3360 -1626 6 646 327 322 26 42 chrU 8019431 8019625 -2029412 + BLASTOPIA_I LTR Gypsy 3541 3925 -1061 6 646 4424 202 40 25 chrU 8020486 8022408 -2026629 - SAR_DM Satellite Satellite -203 1951 1 6 646 4504 2 0 2 chrU 8022532 8023039 -2025998 + Copia_I LTR Copia 4088 4593 0 6 646 2377 4 0 0 chrU 8023039 8023315 -2025722 + Copia_LTR LTR Copia 1 276 0 6 646 239 0 0 0 chrU 8023315 8023349 -2025688 + Copia_LTR LTR Copia 243 276 0 6 646 2420 54 65 15 chrU 8023596 8023937 -2025100 - IDEFIX_LTR LTR Gypsy -236 358 1 6 646 4090 42 0 9 chrU 8023937 8024487 -2024550 - IDEFIX_I LTR Gypsy 0 5628 5084 6 646 3886 59 53 0 chrU 8024785 8025311 -2023726 + PROTOP DNA P 1 554 -3926 6 646 1239 314 56 35 chrU 8025581 8026534 -2022503 - Copia2_I LTR Copia -1374 2788 1816 6 646 3847 190 32 30 chrU 8026634 8028560 -2020477 + SAR_DM Satellite Satellite 1 1930 -256 6 646 323 172 48 57 chrU 8028475 8028580 -2020457 - XDMR_DM Unknown Unknown 0 360 257 6 646 1939 5 0 0 chrU 8028681 8028904 -2020133 + FW_DM LINE Jockey 4470 4692 0 6 646 563 315 6 0 chrU 8030728 8030921 -2018116 + MICROPIA_I LTR Gypsy 3681 3854 -622 6 646 260 328 78 19 chrU 8031494 8031699 -2017338 + ACCORD2_I LTR Gypsy 539 755 -6457 6 646 844 31 0 0 chrU 8031938 8032034 -2017003 + PROTOP DNA P 4384 4479 -1 6 646 34 0 0 0 chrU 8032411 8032445 -2016592 + AT_rich Low_complexity Low_complexity 1 34 0 6 646 205 321 0 0 chrU 8032791 8032872 -2016165 + CT-rich Low_complexity Low_complexity 2 82 0 6 646 907 106 8 95 chrU 8033116 8033378 -2015659 + BATUMI_I LTR Pao 504 742 -7221 6 646 5256 7 0 0 chrU 8033432 8034022 -2015015 + QUASIMODO_LTR LTR Gypsy 1 590 -68 6 646 5975 6 95 0 chrU 8034015 8034719 -2014318 + QUASIMODO_I LTR Gypsy 37 807 -5253 6 646 3869 185 18 40 chrU 8034819 8036763 -2012274 - SAR_DM Satellite Satellite -443 1901 1 6 646 505 184 16 16 chrU 8036863 8036990 -2012047 - ARS406_DM Unknown Unknown -226 127 1 6 646 4006 203 32 19 chrU 8036892 8038781 -2010256 + SAR_DM Satellite Satellite 1 1914 -203 6 646 359 189 0 32 chrU 8038906 8038999 -2010038 + XDMR_DM Unknown Unknown 261 350 -10 6 646 4195 208 16 24 chrU 8038922 8040845 -2008192 - SAR_DM Satellite Satellite -354 1906 1 6 646 21 0 0 0 chrU 8041026 8041047 -2007990 + AT_rich Low_complexity Low_complexity 1 21 0 6 646 23 0 0 0 chrU 8041094 8041117 -2007920 + AT_rich Low_complexity Low_complexity 1 23 0 6 646 24 0 0 0 chrU 8041315 8041339 -2007698 + AT_rich Low_complexity Low_complexity 1 24 0 6 646 799 106 0 8 chrU 8041875 8041999 -2007038 + DNAREP1_DM LINE Penelope 33 155 -439 6 646 567 216 229 12 chrU 8042002 8042234 -2006803 + DNAREP1_DM LINE Penelope 111 392 -202 6 646 22 88 0 0 chrU 8044089 8044146 -2004891 + AT_rich Low_complexity Low_complexity 1 57 0 6 646 23 78 0 0 chrU 8044184 8044235 -2004802 + AT_rich Low_complexity Low_complexity 1 51 0 6 646 26 30 0 0 chrU 8044281 8044314 -2004723 + AT_rich Low_complexity Low_complexity 1 33 0 6 646 2035 43 27 4 chrU 8044666 8044922 -2004115 - PROTOP DNA P 0 4480 4219 6 646 3846 215 37 26 chrU 8045022 8046950 -2002087 + SAR_DM Satellite Satellite 1 1948 -203 6 646 2939 25 0 14 chrU 8047058 8047419 -2001618 - DM176_I LTR Gypsy -6064 356 1 6 646 1155 22 0 0 chrU 8047419 8047556 -2001481 - DM176_LTR LTR Gypsy 0 507 371 6 646 5815 16 43 0 chrU 8047559 8048258 -2000779 - PROTOP_A DNA P -376 729 1 6 646 4765 46 16 76 chrU 8048258 8048994 -2000043 + BATUMI_I LTR Pao 751 1442 -6521 6 646 4281 196 17 21 chrU 8049096 8051026 -1998011 - SAR_DM Satellite Satellite -255 1921 1 6 646 904 251 29 19 chrU 8051137 8051446 -1997591 - XDMR_DM Unknown Unknown -43 317 6 6 646 4603 192 26 32 chrU 8051180 8053062 -1995975 + SAR_DM Satellite Satellite 1 1869 -216 6 646 17273 8 7 0 chrU 8053162 8055095 -1993942 + DMRT1A LINE R1 2333 4279 -904 6 646 3225 52 118 18 chrU 8058213 8058873 -1990164 + PROTOP_A DNA P 304 1029 -76 6 646 1558 55 45 0 chrU 8058900 8059102 -1989935 - PROTOP DNA P -4269 211 1 6 646 365 91 18 0 chrU 8059102 8059155 -1989882 + PROTOP_B DNA P 1095 1148 -5 6 646 4265 213 19 27 chrU 8059255 8061151 -1987886 - SAR_DM Satellite Satellite -242 1881 1 6 646 864 269 24 13 chrU 8060885 8061183 -1987854 + XDMR_DM Unknown Unknown 6 306 -54 6 646 5258 8 2 0 chrU 8061283 8061880 -1987157 - DM1731_I LTR Copia -3378 598 1 6 646 2821 30 0 3 chrU 8061880 8062217 -1986820 - DM1731_LTR LTR Copia 0 336 1 6 646 371 266 7 21 chrU 8062532 8062675 -1986362 + Invader6_I LTR Gypsy 2380 2562 -1537 6 646 3434 22 0 2 chrU 8062685 8063087 -1985950 + STALKER4_LTR LTR Gypsy 1 401 -1 6 646 306 26 26 0 chrU 8063097 8063123 -1985914 + STALKER4_I LTR Gypsy 1 27 -6503 6 646 298 105 0 50 chrU 8063123 8063183 -1985854 + Stalker2_I LTR Gypsy 1 57 -7345 6 646 4434 200 22 27 chrU 8063311 8065238 -1983799 + SAR_DM Satellite Satellite 1 1917 -203 6 646 311 204 30 30 chrU 8065338 8065439 -1983598 - HETA LINE telomeric -2526 3555 3455 6 646 1366 138 12 12 chrU 8065437 8065679 -1983358 - HETA LINE telomeric -602 5479 5238 6 646 228 57 0 28 chrU 8065680 8065716 -1983321 - HETA LINE telomeric -4025 2056 2022 6 646 704 142 0 0 chrU 8065718 8065831 -1983206 - HETA LINE telomeric -4588 1493 1381 6 646 3048 14 14 0 chrU 8065828 8066186 -1982851 + G2_DM LINE Jockey 2726 3088 -14 6 646 3591 191 58 72 chrU 8066185 8067258 -1981779 - HETA LINE telomeric -4700 1381 324 6 646 1407 56 0 8 chrU 8067366 8067831 -1981206 + (AATAG)n Simple_repeat Simple_repeat 1 461 0 6 646 1167 49 8 28 chrU 8067863 8068117 -1980920 + (AATAG)n Simple_repeat Simple_repeat 1 248 0 6 646 1488 71 10 4 chrU 8068130 8069068 -1979969 + (AATAG)n Simple_repeat Simple_repeat 1 943 0 6 646 1314 36 0 0 chrU 8069122 8069290 -1979747 + (AATAG)n Simple_repeat Simple_repeat 3 170 0 6 646 2103 20 21 0 chrU 8069391 8069735 -1979302 + MDG3_I LTR Gypsy 4605 4986 0 6 646 2058 34 4 50 chrU 8069735 8070015 -1979022 + MDG3_LTR LTR Gypsy 1 267 0 6 646 1416 317 31 8 chrU 8070096 8070614 -1978423 + Gypsy6_I LTR Gypsy 6483 7012 0 6 646 490 99 74 0 chrU 8070616 8070697 -1978340 + Gypsy6A_LTR LTR Gypsy 1 87 -333 6 646 3065 50 2 46 chrU 8070702 8071119 -1977918 + DOC3_DM LINE Jockey 11 409 -4331 6 646 932 71 163 0 chrU 8071099 8071240 -1977797 + DOC3_DM LINE Jockey 784 947 -3793 6 646 612 94 10 40 chrU 8071214 8071314 -1977723 + DOC3_DM LINE Jockey 1071 1167 -3573 6 646 882 94 0 0 chrU 8071414 8071531 -1977506 - Copia2_I LTR Copia -354 3808 3692 6 646 48 0 0 0 chrU 8071550 8071598 -1977439 + AT_rich Low_complexity Low_complexity 1 48 0 6 646 2946 0 0 0 chrU 8073437 8073763 -1975274 - FW_DM LINE Jockey -4352 340 15 6 646 4152 195 19 43 chrU 8073759 8075347 -1973690 - SAR_DM Satellite Satellite -441 1549 1 6 646 15337 39 22 2 chrU 8075457 8077374 -1971663 + MDG1_I LTR Gypsy 1267 3223 -3373 6 646 26 30 0 0 chrU 8077542 8077575 -1971462 + AT_rich Low_complexity Low_complexity 1 33 0 6 646 23 68 0 0 chrU 8077621 8077665 -1971372 + AT_rich Low_complexity Low_complexity 1 44 0 6 646 21 89 0 0 chrU 8077703 8077759 -1971278 + AT_rich Low_complexity Low_complexity 1 56 0 6 646 204 40 0 0 chrU 8078665 8078690 -1970347 + (TTG)n Simple_repeat Simple_repeat 2 26 0 6 646 3863 48 24 0 chrU 8078889 8079391 -1969646 + PROTOP DNA P 74 587 -3893 6 646 1089 73 0 0 chrU 8079491 8079642 -1969395 + ARS406_DM Unknown Unknown 39 189 -164 6 646 4505 198 24 30 chrU 8079539 8081407 -1967630 - SAR_DM Satellite Satellite -203 1856 1 6 646 717 179 14 14 chrU 8081552 8081699 -1967338 - HETRP_DM Satellite Satellite -197 1675 1529 6 646 669 193 14 14 chrU 8081861 8082008 -1967029 - HETRP_DM Satellite Satellite -197 1675 1529 6 646 729 179 14 14 chrU 8082140 8082287 -1966750 - HETRP_DM Satellite Satellite -197 1675 1529 6 646 534 208 16 16 chrU 8082449 8082576 -1966461 - HETRP_DM Satellite Satellite -197 1675 1549 6 646 192 40 0 0 chrU 8082576 8082601 -1966436 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 646 522 205 16 16 chrU 8082727 8082851 -1966186 - HETRP_DM Satellite Satellite -197 1675 1552 6 646 475 18 0 0 chrU 8082853 8082909 -1966128 + G6_DM LINE Jockey 1976 2031 -11 6 646 477 178 0 11 chrU 8082927 8083018 -1966019 - HETRP_DM Satellite Satellite -254 1618 1529 6 646 729 179 14 14 chrU 8083150 8083297 -1965740 - HETRP_DM Satellite Satellite -197 1675 1529 6 646 4396 0 0 2 chrU 8083523 8084025 -1965012 + G6_DM LINE Jockey 1542 2042 0 6 646 1353 287 136 19 chrU 8084241 8085029 -1964008 - Copia_I LTR Copia -2314 2279 1400 6 646 4598 201 23 30 chrU 8085534 8087428 -1961609 + SAR_DM Satellite Satellite 1 1881 -203 6 646 579 42 0 0 chrU 8087365 8087436 -1961601 - ARS406_DM Unknown Unknown -164 189 119 6 646 15546 20 25 1 chrU 8087536 8089441 -1959596 + QUASIMODO_I LTR Gypsy 2081 4031 -2029 6 646 929 76 0 0 chrU 8089541 8089672 -1959365 + ARS406_DM Unknown Unknown 59 189 -164 6 646 4385 204 21 29 chrU 8089570 8091445 -1957592 - SAR_DM Satellite Satellite -203 1858 1 6 646 7220 116 90 126 chrU 8091546 8092205 -1956832 + TART LINE telomeric 7010 7722 -6755 6 646 549 55 0 0 chrU 8092205 8092278 -1956759 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 6 646 7220 116 90 126 chrU 8092278 8093174 -1955863 + TART LINE telomeric 7723 8507 -5970 6 646 198 0 0 0 chrU 8093174 8093196 -1955841 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6 646 7220 116 90 126 chrU 8093196 8093448 -1955589 + TART LINE telomeric 8508 8752 -5725 6 646 377 287 16 0 chrU 8093548 8093677 -1955360 - XDMR_DM Unknown Unknown -224 136 6 6 646 1945 286 34 38 chrU 8093563 8095451 -1953586 + SAR_DM Satellite Satellite 1 1880 -217 6 646 382 0 0 0 chrU 8095551 8095595 -1953442 + ACCORD2_LTR LTR Gypsy 171 214 -1 6 646 8376 27 33 0 chrU 8095596 8096861 -1952176 + R1_DM LINE R1 2422 3728 -1628 6 646 1326 123 297 19 chrU 8096860 8097224 -1951813 + ACCORD2_I LTR Gypsy 1310 1774 -5438 6 646 656 70 0 0 chrU 8097217 8097301 -1951736 + ACCORD2_I LTR Gypsy 7122 7205 -7 6 646 1239 20 0 26 chrU 8097301 8097454 -1951583 + ACCORD2_LTR LTR Gypsy 1 149 -66 6 646 802 103 8 0 chrU 8097554 8097680 -1951357 - ARS406_DM Unknown Unknown -226 127 1 6 646 4431 195 21 32 chrU 8097587 8099373 -1949664 + SAR_DM Satellite Satellite 1 1766 -203 6 646 920 202 173 10 chrU 8099161 8099456 -1949581 - XDMR_DM Unknown Unknown 0 360 18 6 646 3029 6 11 27 chrU 8099581 8099947 -1949090 - DM176_LTR LTR Gypsy -147 360 1 6 646 1430 57 0 0 chrU 8099977 8100154 -1948883 - Baggins1 LINE LOA -2929 2524 2348 6 646 1122 97 0 6 chrU 8100165 8100321 -1948716 - Baggins1 LINE LOA -3294 2159 2005 6 646 658 270 13 9 chrU 8100328 8100580 -1948457 + DM412 LTR Gypsy 3420 3690 -3207 6 646 4388 168 24 10 chrU 8100579 8101457 -1947580 + DM412 LTR Gypsy 5000 5889 -1008 6 646 2618 101 37 12 chrU 8101557 8103457 -1945580 - DMSAT6 Satellite Satellite -79 1947 1 6 646 3544 172 20 18 chrU 8103557 8104344 -1944693 - SAR_DM Satellite Satellite -493 979 191 6 646 4479 214 21 31 chrU 8104360 8107452 -1941585 - SAR_DM Satellite Satellite -396 3062 1 6 646 833 64 0 0 chrU 8107556 8107666 -1941371 + ARS406_DM Unknown Unknown 80 189 -164 6 646 4393 209 16 25 chrU 8107578 8109451 -1939586 - SAR_DM Satellite Satellite -220 1856 1 6 646 4487 199 18 25 chrU 8109551 8111443 -1937594 - SAR_DM Satellite Satellite -292 1879 1 6 646 22 0 0 0 chrU 8112016 8112038 -1936999 + AT_rich Low_complexity Low_complexity 1 22 0 6 646 2324 21 0 27 chrU 8112539 8112830 -1936207 - BATUMI_I LTR Pao -679 7284 7002 6 646 406 0 0 37 chrU 8112830 8112884 -1936153 - BATUMI_I LTR Pao 0 7963 7912 6 646 4105 25 10 15 chrU 8112856 8113379 -1935658 + BATUMI_I LTR Pao 6482 7001 -962 6 646 1462 275 37 51 chrU 8112872 8113439 -1935598 - MAX_I LTR Pao -726 7188 6630 6 646 4397 199 20 26 chrU 8113539 8115430 -1933607 + SAR_DM Satellite Satellite 1 1879 -203 6 646 1881 282 39 44 chrU 8115531 8117416 -1931621 + SAR_DM Satellite Satellite 1 1875 -218 6 646 3785 39 4 8 chrU 8117520 8117991 -1931046 - PROTOP DNA P -4011 469 1 6 646 4897 100 89 45 chrU 8117991 8118868 -1930169 - Gypsy12_I LTR Gypsy -4631 915 1 6 646 2949 133 31 42 chrU 8118868 8119410 -1929627 - Gypsy12_LTR LTR Gypsy 0 2336 1801 6 646 4774 7 0 0 chrU 8119510 8120054 -1928983 - G6_DM LINE Jockey -1498 544 1 6 646 1285 291 37 15 chrU 8120099 8120748 -1928289 + Copia_I LTR Copia 2720 3382 -1211 6 646 180 125 0 0 chrU 8120750 8120782 -1928255 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 646 1129 290 21 17 chrU 8120814 8121281 -1927756 + Copia_I LTR Copia 3452 3920 -673 6 646 4503 4 0 0 chrU 8121513 8122020 -1927017 - DM176_LTR LTR Gypsy 0 507 1 6 646 266 54 0 26 chrU 8122020 8122054 -1926983 + ARS406_DM Unknown Unknown 157 189 -164 6 646 3869 208 19 38 chrU 8122030 8123366 -1925671 - SAR_DM Satellite Satellite -281 1310 1 6 646 360 258 39 24 chrU 8123256 8123383 -1925654 + XDMR Unknown Unknown 1 129 -232 6 646 9990 37 6 1 chrU 8123488 8124815 -1924222 + DOC LINE Jockey 3348 4740 0 6 646 4680 18 0 0 chrU 8124824 8125368 -1923669 + DOC2_DM LINE Jockey 2606 3149 -1644 6 646 658 70 0 0 chrU 8125468 8125554 -1923483 - ROVER-LTR_DM LTR Gypsy -236 131 46 6 647 826 259 30 21 chrU 8126876 8127113 -1921924 - HMSBEAGLE_I LTR Gypsy -1033 5496 5258 6 647 367 318 18 18 chrU 8127114 8127332 -1921705 - HMSBEAGLE_I LTR Gypsy -1390 5139 4922 6 647 22 0 0 0 chrU 8127542 8127564 -1921473 + AT_rich Low_complexity Low_complexity 1 22 0 6 647 275 173 38 51 chrU 8127782 8127861 -1921176 + DM412B_LTR LTR Gypsy 232 309 -262 6 647 622 171 19 0 chrU 8128108 8128213 -1920824 + NINJA_I LTR Pao 4528 4634 -1377 6 647 21 71 0 0 chrU 8128842 8128884 -1920153 + AT_rich Low_complexity Low_complexity 1 42 0 6 647 511 232 0 14 chrU 8129418 8129562 -1919475 + XDMR_DM Unknown Unknown 219 360 0 6 647 4170 204 19 22 chrU 8129439 8131283 -1917754 - SAR_DM Satellite Satellite -313 1838 1 6 647 31 26 0 0 chrU 8131902 8131940 -1917097 + AT_rich Low_complexity Low_complexity 1 38 0 6 647 2215 196 176 45 chrU 8131943 8132725 -1916312 - HETA LINE telomeric -149 5932 5048 6 647 1102 172 13 9 chrU 8132721 8132950 -1916087 - TAHRE LINE telomeric -3283 7180 6951 6 647 1699 5 0 0 chrU 8133062 8133253 -1915784 + DOC LINE Jockey 2443 2633 -2092 6 647 4486 196 23 31 chrU 8133353 8135223 -1913814 - SAR_DM Satellite Satellite -354 1855 1 6 647 3073 3 3 0 chrU 8135323 8135668 -1913369 - DOC LINE Jockey -4348 377 32 6 647 636 278 29 18 chrU 8135698 8135973 -1913064 - XDMR_DM Unknown Unknown -56 304 27 6 647 3975 201 22 29 chrU 8135732 8137189 -1911848 + SAR_DM Satellite Satellite 1 1447 -198 6 647 379 337 15 15 chrU 8137292 8137497 -1911540 + Gypsy4_I LTR Gypsy 3269 3473 -2815 6 647 384 297 35 38 chrU 8137657 8137976 -1911061 + TIRANT_I LTR Gypsy 3586 3744 -3948 6 647 1327 28 11 0 chrU 8137981 8138161 -1910876 + TLD2 Unknown Unknown 37 218 0 6 647 605 322 31 37 chrU 8137984 8138806 -1910231 + GTWIN_I LTR Gypsy 2668 3538 -2883 6 647 4377 202 28 32 chrU 8139262 8141130 -1907907 + SAR_DM Satellite Satellite 1 1859 -203 6 647 4360 197 29 26 chrU 8141237 8143090 -1905947 + SAR_DM Satellite Satellite 1 1858 -774 6 647 585 42 0 0 chrU 8143027 8143098 -1905939 - ARS406_DM Unknown Unknown -164 189 119 6 647 4333 194 12 20 chrU 8143198 8145055 -1903982 - SAR_DM Satellite Satellite -217 1842 1 6 647 2755 99 21 15 chrU 8145163 8147023 -1902014 - DMSAT6 Satellite Satellite -59 1872 1 6 647 6290 127 23 15 chrU 8147133 8148953 -1900084 - TART LINE telomeric -6799 7678 6753 6 647 2375 183 10 6 chrU 8149089 8149865 -1899172 - SAR_DM Satellite Satellite -629 778 1 6 647 411 212 10 10 chrU 8149855 8149955 -1899082 + XDMR_DM Unknown Unknown 252 351 -9 6 647 3951 199 27 25 chrU 8149879 8150940 -1898097 - SAR_DM Satellite Satellite -353 1119 57 6 647 3568 35 0 5 chrU 8151045 8151474 -1897563 + MAX_I LTR Pao 6703 7129 -785 6 647 4194 49 0 0 chrU 8151497 8152029 -1897008 + MAX_I LTR Pao 7381 7912 -2 6 647 1729 118 76 10 chrU 8152038 8152339 -1896698 + MAX_LTR LTR Pao 1 321 0 6 647 4544 18 146 9 chrU 8152339 8152899 -1896138 - CIRCE LINE Composite -1883 4473 3837 6 647 11264 25 15 1 chrU 8152999 8154335 -1894702 + DMCR1A LINE CR1 2420 3773 -697 6 647 3373 35 89 0 chrU 8154334 8154763 -1894274 + DMCR1A LINE CR1 4003 4469 -1 6 647 472 141 13 0 chrU 8154770 8154848 -1894189 - Gypsy12_I LTR Gypsy -5131 415 337 6 647 2452 24 0 0 chrU 8154950 8155238 -1893799 - STALKER4_LTR LTR Gypsy -114 288 1 6 647 2600 112 13 30 chrU 8155238 8156788 -1892249 - DMSAT6 Satellite Satellite -79 1523 1 6 647 747 114 0 8 chrU 8156899 8157023 -1892014 - ARS406_DM Unknown Unknown -230 123 1 6 647 4147 202 19 34 chrU 8156926 8158738 -1890299 + SAR_DM Satellite Satellite 1 1785 -203 6 647 10172 43 27 6 chrU 8158842 8160119 -1888918 - BATUMI_I LTR Pao -3669 4294 2991 6 647 27 29 0 0 chrU 8160593 8160627 -1888410 + AT_rich Low_complexity Low_complexity 1 34 0 6 647 4567 197 20 26 chrU 8160789 8162622 -1886415 + SAR_DM Satellite Satellite 1 1822 -225 6 647 4267 207 16 22 chrU 8162736 8164571 -1884466 - SAR_DM Satellite Satellite -300 1823 1 6 647 4196 193 41 32 chrU 8164671 8166510 -1882527 - SAR_DM Satellite Satellite -359 1854 1 6 647 371 0 0 0 chrU 8166613 8166655 -1882382 + ARS406_DM Unknown Unknown 120 161 -192 6 647 4335 196 24 27 chrU 8166620 8168451 -1880586 - SAR_DM Satellite Satellite -242 1825 1 6 647 2769 191 10 5 chrU 8168554 8169165 -1879872 + SAR_DM Satellite Satellite 231 844 -628 6 647 3519 181 22 24 chrU 8169192 8170036 -1879001 + SAR_DM Satellite Satellite 373 1215 -257 6 647 605 70 0 0 chrU 8169988 8170070 -1878967 - ARS406_DM Unknown Unknown -164 189 108 6 647 2293 85 40 19 chrU 8170070 8170395 -1878642 - Gypsy6A_LTR LTR Gypsy 0 420 89 6 647 2675 98 21 21 chrU 8170495 8172268 -1876769 + DMSAT6 Satellite Satellite 1 1773 -92 6 647 1029 98 55 0 chrU 8172427 8172591 -1876446 - DMRT1C LINE R1 -2660 2783 2611 6 647 4315 74 0 3 chrU 8172637 8173210 -1875827 - DMRT1C LINE R1 -2810 2633 2063 6 647 5145 86 66 45 chrU 8173209 8174057 -1874980 - DMRT1C LINE R1 -3510 1933 1068 6 647 561 321 2 8 chrU 8174054 8174259 -1874778 + ZAM_I LTR Gypsy 1615 1786 -5704 6 647 3909 217 23 30 chrU 8174359 8175632 -1873405 + SAR_DM Satellite Satellite 1 1264 -203 6 647 2575 173 30 6 chrU 8175649 8176189 -1872848 + SAR_DM Satellite Satellite 371 923 -549 6 647 4352 198 23 32 chrU 8176289 8178118 -1870919 + SAR_DM Satellite Satellite 1 1813 -203 6 647 4091 177 16 13 chrU 8178223 8180046 -1868991 - SAR_DM Satellite Satellite -255 1828 1 6 647 8116 12 8 2 chrU 8180147 8181081 -1867956 - DMRT1B LINE R1 -4244 939 1 6 647 5555 12 30 0 chrU 8181334 8181973 -1867064 - DMRT1A LINE R1 -9 5174 4517 6 647 3112 36 10 0 chrU 8182073 8182489 -1866548 - IDEFIX_I LTR Gypsy -284 5344 4925 6 647 7828 52 62 4 chrU 8182496 8183892 -1865145 - IDEFIX_I LTR Gypsy -972 4656 3180 6 647 4445 202 25 26 chrU 8183995 8185805 -1863232 + SAR_DM Satellite Satellite 1 1807 -220 6 647 4397 194 24 29 chrU 8185911 8187721 -1861316 - SAR_DM Satellite Satellite -416 1800 1 6 647 4388 204 23 29 chrU 8187829 8189637 -1859400 + SAR_DM Satellite Satellite 1 1796 -203 6 647 5184 7 0 0 chrU 8189741 8190312 -1858725 - LSU-rRNA_Dme rRNA rRNA -479 3421 2851 6 647 343 49 0 0 chrU 8190308 8190349 -1858688 - LSU-rRNA_Dme rRNA rRNA -1220 2680 2640 6 647 4891 14 0 0 chrU 8190347 8190901 -1858136 - R1_DM LINE R1 0 5356 4803 6 647 612 42 0 0 chrU 8190904 8190976 -1858061 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2578 6 647 5118 16 0 2 chrU 8190972 8191554 -1857483 - R2_DM LINE R2 -3 3604 3024 6 647 1140 42 7 0 chrU 8192794 8192937 -1856100 - DIVER2_LTR LTR Pao 0 385 242 6 647 971 36 0 0 chrU 8192950 8193061 -1855976 - DIVER2_LTR LTR Pao -274 111 1 6 647 3384 28 2 2 chrU 8193061 8193462 -1855575 - DIVER2_I LTR Pao 0 4147 3747 6 647 4435 112 49 75 chrU 8193563 8194483 -1854554 + PROTOP_B DNA P 258 1153 0 6 647 34 0 0 0 chrU 8194860 8194894 -1854143 + AT_rich Low_complexity Low_complexity 1 34 0 6 647 2792 90 25 29 chrU 8195500 8196763 -1852274 + DMSAT6 Satellite Satellite 1 1258 -3 6 647 2672 78 12 20 chrU 8196776 8197275 -1851762 + DMSAT6 Satellite Satellite 1 494 0 6 647 24 53 0 0 chrU 8197488 8197526 -1851511 + AT_rich Low_complexity Low_complexity 1 38 0 6 647 728 179 14 14 chrU 8197528 8197675 -1851362 - HETRP_DM Satellite Satellite -197 1675 1529 6 647 513 209 8 17 chrU 8197843 8197960 -1851077 - HETRP_DM Satellite Satellite -208 1664 1549 6 647 300 27 0 0 chrU 8197960 8197997 -1851040 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 647 605 221 14 14 chrU 8198122 8198269 -1850768 - HETRP_DM Satellite Satellite -197 1675 1529 6 647 513 224 16 16 chrU 8198410 8198537 -1850500 - HETRP_DM Satellite Satellite -197 1675 1549 6 647 300 27 0 0 chrU 8198537 8198574 -1850463 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 647 3664 12 7 5 chrU 8198692 8199114 -1849923 + Invader1_LTR LTR Gypsy 1 423 0 6 647 564 0 0 0 chrU 8199114 8199176 -1849861 + Invader1_I LTR Gypsy 1 62 -3124 6 647 7232 54 89 2 chrU 8201194 8202981 -1846056 - MDG1_I LTR Gypsy -3063 3533 1591 6 647 1142 41 0 0 chrU 8203081 8203226 -1845811 + ARS406_DM Unknown Unknown 43 187 -166 6 647 4349 196 19 31 chrU 8203125 8204881 -1844156 - SAR_DM Satellite Satellite -203 1735 1 6 647 2341 242 21 9 chrU 8204984 8205676 -1843361 + G6_DM LINE Jockey 715 1338 -3008 6 647 6540 23 45 0 chrU 8205683 8206468 -1842569 + G2_DM LINE Jockey 638 1457 -1645 6 647 1858 55 0 0 chrU 8206467 8206705 -1842332 - G2_DM LINE Jockey -75 3027 2790 6 647 270 0 129 0 chrU 8206708 8206778 -1842259 + (TA)n Simple_repeat Simple_repeat 1 79 0 6 647 4031 214 21 28 chrU 8206883 8208660 -1840377 + SAR_DM Satellite Satellite 1 1763 -225 6 647 266 75 0 70 chrU 8208636 8208679 -1840358 - ARS406_DM Unknown Unknown -164 189 150 6 647 992 192 55 6 chrU 8208799 8210574 -1838463 - SAR_DM Satellite Satellite -680 1861 1 6 647 4187 208 30 25 chrU 8210677 8212469 -1836568 + SAR_DM Satellite Satellite 1 1799 -203 6 647 3991 218 26 46 chrU 8212576 8214361 -1834676 + SAR_DM Satellite Satellite 1 1749 -203 6 647 2022 52 52 0 chrU 8214462 8214911 -1834126 - PROTOP_B DNA P -347 758 420 6 647 7070 20 68 0 chrU 8214911 8215945 -1833092 - PROTOP_A DNA P 0 1105 1 6 647 822 77 0 0 chrU 8216352 8216469 -1832568 - ARS406_DM Unknown Unknown -236 117 1 6 647 4313 185 14 18 chrU 8216376 8217355 -1831682 + SAR_DM Satellite Satellite 1 1015 -984 6 647 613 14 0 0 chrU 8217355 8217426 -1831611 - ARS406_DM Unknown Unknown -164 189 119 6 647 4313 185 14 18 chrU 8217426 8218139 -1830898 + SAR_DM Satellite Satellite 1016 1757 -242 6 647 376 135 0 26 chrU 8218239 8218315 -1830722 - ARS406_DM Unknown Unknown -279 74 1 6 647 4632 202 23 28 chrU 8218275 8220025 -1829012 + SAR_DM Satellite Satellite 1 1742 -216 6 647 4091 197 17 19 chrU 8222011 8223061 -1825976 - SAR_DM Satellite Satellite -228 1244 197 6 647 618 118 0 0 chrU 8222970 8223072 -1825965 + ARS406_DM Unknown Unknown 1 102 -251 6 647 1837 213 74 25 chrU 8223088 8223776 -1825261 - SAR_DM Satellite Satellite -425 1047 326 6 647 5549 64 32 16 chrU 8223896 8224734 -1824303 + MDG1_I LTR Gypsy 282 1133 -5463 6 647 1743 71 7 0 chrU 8224806 8225075 -1823962 + MDG1_I LTR Gypsy 1132 1402 -5194 6 647 22 80 0 0 chrU 8225249 8225299 -1823738 + AT_rich Low_complexity Low_complexity 1 50 0 6 647 2542 52 0 0 chrU 8225354 8225680 -1823357 - ZAM_I LTR Gypsy -5806 1684 1359 6 647 2504 101 16 24 chrU 8225781 8227557 -1821480 + DMSAT6 Satellite Satellite 1 1761 -74 6 647 3383 27 10 0 chrU 8227657 8228071 -1820966 + HETA LINE telomeric 1612 2029 -4052 6 647 9479 67 14 2 chrU 8228083 8229412 -1819625 + HETA LINE telomeric 2639 3983 -2098 6 647 3390 5 0 2 chrU 8229532 8229939 -1819098 + DMRT1A LINE R1 813 1218 -3965 6 647 1624 26 0 0 chrU 8229936 8230130 -1818907 - DMRT1A LINE R1 -4989 194 1 6 647 632 40 58 48 chrU 8230139 8230243 -1818794 - QUASIMODO_LTR LTR Gypsy -553 105 1 6 647 374 231 70 85 chrU 8230858 8231057 -1817980 + HMSBEAGLE_I LTR Gypsy 224 419 -6110 6 647 21 0 0 0 chrU 8231124 8231145 -1817892 + AT_rich Low_complexity Low_complexity 1 21 0 6 647 4007 195 27 20 chrU 8231410 8233129 -1815908 + SAR_DM Satellite Satellite 1 1730 -227 6 647 1049 60 7 0 chrU 8233032 8233182 -1815855 - ARS406_DM Unknown Unknown -164 189 39 6 647 407 0 0 0 chrU 8233282 8233331 -1815706 + NINJA_I LTR Pao 5963 6011 0 6 647 2263 54 3 28 chrU 8233331 8233655 -1815382 + NINJA_LTR LTR Pao 1 316 -1 6 647 1392 296 58 10 chrU 8233771 8234292 -1814745 - DIVER2_I LTR Pao -226 3921 3376 6 647 21 0 0 0 chrU 8234391 8234412 -1814625 + AT_rich Low_complexity Low_complexity 1 21 0 6 647 827 167 94 12 chrU 8234671 8234967 -1814070 + DNAREP1_DM LINE Penelope 66 315 -279 6 647 330 67 629 0 chrU 8234967 8235056 -1813981 + DNAREP1_DM LINE Penelope 294 438 -156 6 647 6332 219 44 7 chrU 8235156 8236918 -1812119 + DM412 LTR Gypsy 4403 6229 -668 6 647 4539 16 0 7 chrU 8237026 8237576 -1811461 + R2_DM LINE R2 2976 3521 -86 6 647 5033 46 95 8 chrU 8237579 8238396 -1810641 + R1_DM LINE R1 119 1294 -4062 6 647 3294 27 0 0 chrU 8238394 8238795 -1810242 + R1_DM LINE R1 1607 2007 -3349 6 647 3682 80 10 29 chrU 8238895 8239478 -1809559 - Gypsy12_I LTR Gypsy -4974 572 1 6 647 307 218 34 34 chrU 8239492 8239639 -1809398 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 6 647 1194 179 88 24 chrU 8239693 8240024 -1809013 - Gypsy12_LTR LTR Gypsy -827 1509 1158 6 647 466 212 170 7 chrU 8240151 8240298 -1808739 - Gypsy12_LTR LTR Gypsy -1596 740 570 6 647 528 100 0 32 chrU 8240285 8240378 -1808659 - Gypsy12_I LTR Gypsy -4976 570 481 6 647 292 214 0 0 chrU 8240467 8240523 -1808514 - Gypsy12_I LTR Gypsy -1816 464 409 6 647 8827 157 18 14 chrU 8240761 8242525 -1806512 - HETA LINE telomeric -1835 4246 2475 6 647 540 176 75 22 chrU 8242631 8242765 -1806272 + ROVER-I_DM LTR Gypsy 6444 6584 0 6 647 1727 117 44 29 chrU 8242765 8243109 -1805928 + ROVER-LTR_DM LTR Gypsy 1 349 -18 6 647 446 0 19 0 chrU 8243109 8243163 -1805874 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 647 2101 103 273 5 chrU 8243392 8244015 -1805022 + NINJA_I LTR Pao 4751 5540 -471 6 647 1637 122 116 0 chrU 8244031 8244333 -1804704 - DNAREP1_DM LINE Penelope -3 591 255 6 647 584 310 41 49 chrU 8244487 8244933 -1804104 - Gypsy4_I LTR Gypsy -3655 2633 2024 6 647 932 40 0 8 chrU 8246347 8246473 -1802564 - IDEFIX_I LTR Gypsy -5454 174 50 6 647 3836 91 67 2 chrU 8246472 8247043 -1801994 + Gypsy12_I LTR Gypsy 4288 4895 -651 6 647 6035 87 115 8 chrU 8247054 8248103 -1800934 - Gypsy12_I LTR Gypsy -260 5286 4125 6 647 7133 40 41 6 chrU 8248204 8249183 -1799854 - IDEFIX_I LTR Gypsy -1902 3726 2714 6 647 4698 46 2 3 chrU 8249155 8249782 -1799255 - IDEFIX_I LTR Gypsy -3021 2607 1982 6 647 1255 46 0 0 chrU 8249782 8249957 -1799080 - IDEFIX_I LTR Gypsy -4602 1026 852 6 647 964 0 0 0 chrU 8250057 8250172 -1798865 + QUASIMODO_LTR LTR Gypsy 544 658 0 6 647 489 0 0 0 chrU 8250173 8250232 -1798805 + STALKER4_I LTR Gypsy 6472 6530 0 6 647 3419 2 0 5 chrU 8250232 8250636 -1798401 + STALKER4_LTR LTR Gypsy 1 402 0 6 647 22 0 0 0 chrU 8251778 8251800 -1797237 + AT_rich Low_complexity Low_complexity 1 22 0 6 647 3825 182 11 16 chrU 8251913 8253028 -1796009 + SAR_DM Satellite Satellite 1 1109 -227 6 647 1354 182 9 9 chrU 8253042 8253370 -1795667 + SAR_DM Satellite Satellite 451 778 -694 6 647 423 100 0 0 chrU 8253386 8253456 -1795581 + (TAA)n Simple_repeat Simple_repeat 3 72 0 6 647 1675 15 0 0 chrU 8253456 8253655 -1795382 + MDG1_LTR LTR Gypsy 87 285 -157 6 647 4122 202 26 25 chrU 8253766 8255491 -1793546 - SAR_DM Satellite Satellite -396 1726 1 6 647 2541 100 16 12 chrU 8255602 8256523 -1792514 - DMSAT6 Satellite Satellite -10 924 1 6 647 2488 102 42 21 chrU 8256539 8257349 -1791688 - DMSAT6 Satellite Satellite 0 827 1 6 80 3974 195 18 21 chrU 8257449 8259189 -1789848 - SAR_DM Satellite Satellite -450 1735 1 6 648 3774 192 16 19 chrU 8259292 8261010 -1788027 + SAR_DM Satellite Satellite 1 1714 -677 6 648 1707 274 44 49 chrU 8261155 8262837 -1786200 - SAR_DM Satellite Satellite -314 1674 1 6 648 372 295 35 20 chrU 8262669 8262866 -1786171 + XDMR Unknown Unknown 1 200 -161 6 648 4107 195 36 24 chrU 8262979 8264708 -1784329 - SAR_DM Satellite Satellite -300 1749 1 6 648 351 49 65 16 chrU 8264856 8264918 -1784119 - HMSBEAGLE_I LTR Gypsy -6464 65 1 6 648 897 173 102 15 chrU 8264917 8265122 -1783915 - DMLTR5 LTR Gypsy 0 266 44 6 648 262 106 0 21 chrU 8266164 8266212 -1782825 - HMSBEAGLE_I LTR Gypsy -6308 221 175 6 648 351 49 65 16 chrU 8266234 8266296 -1782741 - HMSBEAGLE_I LTR Gypsy -6464 65 1 6 648 848 183 102 15 chrU 8266295 8266500 -1782537 - DMLTR5 LTR Gypsy 0 266 44 6 648 5781 6 1 0 chrU 8268475 8269157 -1779880 + DM176_I LTR Gypsy 2735 3417 -3003 6 648 8510 9 40 0 chrU 8269153 8270206 -1778831 + DM176_I LTR Gypsy 3972 5066 -1354 6 648 3546 115 4 9 chrU 8270307 8270859 -1778178 + Gypsy12_I LTR Gypsy 1501 2049 -3497 6 648 1150 111 30 5 chrU 8271605 8271804 -1777233 + DIVER2_I LTR Pao 2417 2620 -1527 6 648 870 37 0 0 chrU 8271927 8272035 -1777002 - ACCORD2_I LTR Gypsy -5845 1367 1260 6 648 278 330 1 15 chrU 8272289 8272473 -1776564 - Gypsy_DS LTR Gypsy -4374 3148 3008 6 648 2148 54 0 30 chrU 8272891 8273195 -1775842 + NINJA_LTR LTR Pao 1 295 -22 6 648 4755 44 0 19 chrU 8273188 8273860 -1775177 + NINJA_I LTR Pao 160 818 -5193 6 648 4089 27 82 2 chrU 8273971 8274521 -1774516 + IDEFIX_LTR LTR Gypsy 1 594 0 6 648 2764 124 52 173 chrU 8274527 8275412 -1773625 - MDG1_I LTR Gypsy -5818 778 1 6 648 3902 203 11 20 chrU 8275784 8277500 -1771537 - SAR_DM Satellite Satellite -1088 1699 1 6 648 593 184 128 127 chrU 8278217 8278624 -1770413 - DNAREP1_DM LINE Penelope -212 382 1 6 648 1004 167 80 18 chrU 8278768 8278993 -1770044 - DNAREP1_DM LINE Penelope 0 594 356 6 648 308 167 0 0 chrU 8279030 8279078 -1769959 - DNAREP1_DM LINE Penelope -545 49 2 6 648 1383 105 17 48 chrU 8279083 8279314 -1769723 + Invader1_LTR LTR Gypsy 1 224 -199 6 648 648 0 0 0 chrU 8279427 8279502 -1769535 - Copia_LTR LTR Copia -201 75 1 6 648 3267 178 27 47 chrU 8279724 8280466 -1768571 - Gypsy12_LTR LTR Gypsy -1 2335 1609 6 648 290 61 0 58 chrU 8280493 8280545 -1768492 + BATUMI_I LTR Pao 6999 7047 -916 6 648 4302 46 3 56 chrU 8280541 8281146 -1767891 + BATUMI_I LTR Pao 2215 2787 -5176 6 648 4044 217 20 27 chrU 8281246 8282943 -1766094 + SAR_DM Satellite Satellite 1 1685 -216 6 648 903 36 0 0 chrU 8282852 8282962 -1766075 - ARS406_DM Unknown Unknown -164 189 80 6 648 8011 45 51 1 chrU 8283062 8284084 -1764953 + ROOA_I LTR Pao 2546 3618 -3231 6 648 2198 52 14 7 chrU 8284079 8284367 -1764670 + ROOA_I LTR Pao 3724 4013 -2836 6 648 2776 72 110 2 chrU 8284359 8284778 -1764259 + ROOA_I LTR Pao 4536 4999 -1850 6 648 314 121 39 126 chrU 8284884 8285000 -1764037 + DMTOM1_LTR LTR Gypsy 306 403 -7 6 648 545 259 24 12 chrU 8284999 8285167 -1763870 + Copia_I LTR Copia 4158 4327 -266 6 648 27 62 0 0 chrU 8285214 8285262 -1763775 + AT_rich Low_complexity Low_complexity 1 48 0 6 648 292 205 33 33 chrU 8285308 8285399 -1763638 + Copia_I LTR Copia 4408 4498 -95 6 648 1478 317 59 39 chrU 8285517 8286577 -1762460 + HMSBEAGLE_I LTR Gypsy 2079 3695 -2834 6 648 1566 35 0 2 chrU 8286695 8287189 -1761848 + (ACATG)n Simple_repeat Simple_repeat 1 493 0 6 648 1620 4 25 8 chrU 8287189 8288407 -1760630 + (AGATG)n Simple_repeat Simple_repeat 1 1237 0 6 648 369 196 10 19 chrU 8288515 8288619 -1760418 + XDMR_DM Unknown Unknown 258 360 0 6 648 3993 198 19 31 chrU 8288542 8289610 -1759427 - SAR_DM Satellite Satellite -361 1111 57 6 648 959 262 19 15 chrU 8289344 8289669 -1759368 + XDMR_DM Unknown Unknown 6 331 -29 6 648 2764 162 11 9 chrU 8289667 8290220 -1758817 - SAR_DM Satellite Satellite -539 933 380 6 648 3823 5 0 0 chrU 8290320 8290754 -1758283 - QUASIMODO_LTR LTR Gypsy -224 434 1 6 648 1958 168 31 8 chrU 8290754 8291139 -1757898 - TART LINE telomeric -5094 9383 8990 6 648 22 56 0 0 chrU 8291302 8291338 -1757699 + AT_rich Low_complexity Low_complexity 1 36 0 6 648 330 176 42 92 chrU 8291383 8291502 -1757535 + Copia_I LTR Copia 4401 4513 -80 6 648 335 290 30 8 chrU 8291888 8292020 -1757017 + Invader4_I LTR Gypsy 1 135 -2278 6 648 798 170 32 19 chrU 8292225 8292381 -1756656 + HETRP_DM Satellite Satellite 1518 1675 -197 6 648 4010 125 87 92 chrU 8292388 8293322 -1755715 - HOBO DNA hAT 0 3016 2088 6 648 499 226 19 52 chrU 8293329 8293483 -1755554 - HOBO DNA hAT -1115 1901 1753 6 648 2212 118 6 6 chrU 8293491 8293842 -1755195 - HOBO DNA hAT -1380 1636 1286 6 648 1563 47 0 0 chrU 8293943 8294136 -1754901 + DM1731_LTR LTR Copia 144 336 0 6 648 8066 93 36 37 chrU 8294136 8295652 -1753385 + DM1731_I LTR Copia 1 1514 -2462 6 648 4291 224 30 22 chrU 8295752 8299269 -1749768 + SAR_DM Satellite Satellite 1 3546 -217 6 648 4335 200 21 23 chrU 8299369 8301069 -1747968 - SAR_DM Satellite Satellite -828 1696 1 6 648 6953 226 24 6 chrU 8301268 8302876 -1746161 + ROVER-I_DM LTR Gypsy 1878 3513 -3071 6 648 4374 191 15 21 chrU 8302979 8304529 -1744508 - SAR_DM Satellite Satellite -996 1690 43 6 648 860 54 0 0 chrU 8304529 8304641 -1744396 + ARS406_DM Unknown Unknown 78 189 -164 6 648 4374 191 15 21 chrU 8304641 8304679 -1744358 - SAR_DM Satellite Satellite -996 42 1 6 648 2720 91 17 34 chrU 8304779 8305949 -1743088 + DMSAT6 Satellite Satellite 1 1149 -37 6 648 2440 97 12 53 chrU 8305978 8306468 -1742569 + DMSAT6 Satellite Satellite 1 470 0 6 648 12063 102 24 1 chrU 8306575 8308265 -1740772 + Gypsy12_I LTR Gypsy 3079 4808 -738 6 648 3695 162 309 29 chrU 8308403 8309608 -1739429 + TART LINE telomeric 8950 10491 -3986 6 648 34 24 0 0 chrU 8309619 8309660 -1739377 + AT_rich Low_complexity Low_complexity 1 41 0 6 648 8533 54 28 15 chrU 8310155 8311303 -1737734 - BATUMI_I LTR Pao -4144 3819 2657 6 648 1492 43 23 23 chrU 8311303 8311517 -1737520 - BATUMI_I LTR Pao -5836 2127 1914 6 648 2521 47 3 15 chrU 8311515 8311842 -1737195 - BATUMI_I LTR Pao -5891 2072 1750 6 648 4258 201 13 21 chrU 8311942 8313628 -1735409 - SAR_DM Satellite Satellite -487 1672 1 6 648 9884 30 59 0 chrU 8313729 8314948 -1734089 + NINJA_I LTR Pao 3240 4530 -1481 6 648 4037 21 2 2 chrU 8314941 8315414 -1733623 + NINJA_I LTR Pao 4778 5250 -761 6 648 364 181 21 6 chrU 8315514 8315624 -1733413 + XDMR_DM Unknown Unknown 260 361 0 6 648 4407 191 22 29 chrU 8315538 8317187 -1731850 - SAR_DM Satellite Satellite -354 1637 1 6 648 4862 103 12 3 chrU 8317297 8318016 -1731021 - S_DM DNA Tc1 -188 1548 823 6 648 1689 27 4 108 chrU 8318015 8318266 -1730771 - MAX_I LTR Pao -7689 225 1 6 648 1788 130 70 0 chrU 8318266 8318566 -1730471 - MAX_LTR LTR Pao 0 321 1 6 648 965 28 0 0 chrU 8318871 8318980 -1730057 - PROTOP DNA P 0 4480 4372 6 648 3247 3 0 3 chrU 8319080 8319444 -1729593 - MDG3_I LTR Gypsy -4623 363 1 6 648 2153 22 4 50 chrU 8319443 8319723 -1729314 - MDG3_LTR LTR Gypsy 0 267 1 6 648 2092 72 3 24 chrU 8319723 8320052 -1728985 - TART LINE telomeric -11364 3113 2792 6 648 4786 79 5 0 chrU 8320091 8320763 -1728274 - TART LINE telomeric -13217 1260 586 6 648 4397 200 32 25 chrU 8320863 8322539 -1726498 + SAR_DM Satellite Satellite 1 1688 -203 6 648 2776 3 3 6 chrU 8322643 8322963 -1726074 + BATUMI_I LTR Pao 7645 7963 0 6 648 2104 42 3 34 chrU 8322963 8323255 -1725782 + BATUMI_I LTR Pao 7002 7284 -679 6 648 3805 195 20 16 chrU 8323255 8324302 -1724735 + SAR_DM Satellite Satellite 1 1051 -203 6 648 4100 195 26 24 chrU 8324422 8326097 -1722940 - SAR_DM Satellite Satellite -708 1678 1 6 648 357 20 0 57 chrU 8326200 8326253 -1722784 - CIRCE LINE Composite -2792 3564 3515 6 648 3634 188 36 55 chrU 8326368 8327340 -1721697 + HETA LINE telomeric 5166 6081 0 6 648 1005 204 39 51 chrU 8327334 8327875 -1721162 + HETA LINE telomeric 6557 7171 -3292 6 648 9808 86 57 41 chrU 8327975 8329642 -1719395 + MICROPIA_I LTR Gypsy 1587 3279 -1197 6 648 283 372 16 16 chrU 8330273 8330456 -1718581 - NOMAD_I LTR Gypsy -2365 4207 4025 6 648 2421 4 0 0 chrU 8330490 8330756 -1718281 - Invader2_LTR LTR Gypsy 0 266 1 6 648 5328 6 0 3 chrU 8330756 8331405 -1717632 - Invader2_I LTR Gypsy 0 4592 3946 6 648 4416 201 25 30 chrU 8331506 8333162 -1715875 - SAR_DM Satellite Satellite -836 1647 1 6 648 962 76 7 20 chrU 8333283 8334897 -1714140 - RSP Satellite Satellite 0 1592 1 6 648 4191 215 24 27 chrU 8335012 8338397 -1710640 - SAR_DM Satellite Satellite -397 3374 1 6 648 941 285 14 17 chrU 8339322 8339618 -1709419 - HMSBEAGLE_I LTR Gypsy -977 5552 5258 6 648 632 318 37 31 chrU 8339619 8340129 -1708908 - HMSBEAGLE_I LTR Gypsy -1390 5139 4627 6 648 4511 23 4 0 chrU 8340243 8340766 -1708271 - DMCR1A LINE CR1 -2733 1737 1213 6 648 2883 42 28 0 chrU 8340768 8341122 -1707915 - DMCR1A LINE CR1 -3365 1105 742 6 648 498 333 81 40 chrU 8341183 8341825 -1707212 - BLASTOPIA_I LTR Gypsy -1193 3288 2621 6 648 845 70 0 0 chrU 8341984 8342099 -1706938 + ARS406_DM Unknown Unknown 75 189 -164 6 648 4442 199 26 33 chrU 8341996 8343577 -1705460 - SAR_DM Satellite Satellite -203 1569 1 6 648 917 258 19 13 chrU 8343309 8343619 -1705418 + XDMR_DM Unknown Unknown 6 317 -43 6 648 4165 201 19 21 chrU 8343723 8345358 -1703679 - SAR_DM Satellite Satellite -359 1632 1 6 648 3265 77 58 11 chrU 8345458 8346293 -1702744 + Gypsy12_I LTR Gypsy 4673 5546 0 6 648 2275 189 27 57 chrU 8346292 8346840 -1702197 + Gypsy12_LTR LTR Gypsy 1 532 -1804 6 648 702 186 14 14 chrU 8347355 8347502 -1701535 + HETRP_DM Satellite Satellite 1529 1675 -197 6 648 24 53 0 0 chrU 8347504 8347542 -1701495 + AT_rich Low_complexity Low_complexity 1 38 0 6 648 713 186 14 7 chrU 8347630 8347776 -1701261 + HETRP_DM Satellite Satellite 1529 1675 -197 6 648 393 39 0 0 chrU 8347902 8347953 -1701084 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 648 534 216 16 31 chrU 8347953 8348082 -1700955 + HETRP_DM Satellite Satellite 1549 1675 -197 6 648 646 207 14 14 chrU 8348219 8348366 -1700671 + HETRP_DM Satellite Satellite 1529 1675 -197 6 648 294 29 0 0 chrU 8348492 8348527 -1700510 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 648 518 200 8 17 chrU 8348527 8348644 -1700393 + HETRP_DM Satellite Satellite 1549 1664 -208 6 648 4257 197 22 27 chrU 8348938 8350560 -1698477 - SAR_DM Satellite Satellite -300 1613 1 6 648 304 125 36 0 chrU 8350756 8350812 -1698225 - TLD2 Unknown Unknown -150 68 11 6 648 207 114 0 0 chrU 8350919 8350954 -1698083 + (T)n Simple_repeat Simple_repeat 1 35 0 6 648 27 0 0 0 chrU 8351244 8351271 -1697766 + AT_rich Low_complexity Low_complexity 1 27 0 6 648 302 315 40 40 chrU 8353075 8353294 -1695743 + ZAM_I LTR Gypsy 3451 3697 -3793 6 648 1620 6 0 0 chrU 8354115 8354451 -1694586 + (TTATA)n Simple_repeat Simple_repeat 1 336 0 6 648 4190 215 17 28 chrU 8354474 8355687 -1693350 + SAR_DM Satellite Satellite 57 1256 -216 6 648 1075 62 0 0 chrU 8355596 8355740 -1693297 - ARS406_DM Unknown Unknown -164 189 46 6 648 8523 50 21 7 chrU 8355841 8356950 -1692087 - R1_DM LINE R1 -4232 1124 1 6 648 3982 17 19 12 chrU 8356983 8357463 -1691574 - R1_DM LINE R1 0 5356 4874 6 648 955 262 12 18 chrU 8357563 8357893 -1691144 - XDMR_DM Unknown Unknown -27 333 6 6 648 4399 203 18 23 chrU 8357626 8359185 -1689852 + SAR_DM Satellite Satellite 1 1551 -208 6 648 1496 254 28 33 chrU 8359288 8359370 -1689667 - SAR_DM Satellite Satellite -675 797 598 6 648 2633 64 3 0 chrU 8359370 8359730 -1689307 + XDMR Unknown Unknown 1 361 0 6 648 2674 58 6 0 chrU 8359730 8360089 -1688948 + XDMR Unknown Unknown 1 361 0 6 648 1496 254 28 33 chrU 8359730 8359890 -1689147 - SAR_DM Satellite Satellite -675 597 199 6 648 2711 58 3 0 chrU 8360089 8360449 -1688588 + XDMR Unknown Unknown 1 361 0 6 648 1178 265 39 51 chrU 8360261 8360449 -1688588 - SAR_DM Satellite Satellite -218 1254 837 6 648 2626 67 3 0 chrU 8360449 8360809 -1688228 + XDMR Unknown Unknown 1 361 0 6 648 1178 265 39 51 chrU 8360809 8360905 -1688132 - SAR_DM Satellite Satellite -218 836 619 6 648 9809 72 65 23 chrU 8361008 8362627 -1686410 + STALKER4_I LTR Gypsy 385 2125 -4405 6 648 1244 12 10 46 chrU 8362727 8362933 -1686104 + MDG1_I LTR Gypsy 6411 6799 -98 6 648 423 100 0 0 chrU 8362937 8363007 -1686030 + (TAA)n Simple_repeat Simple_repeat 3 72 0 6 648 3047 22 0 0 chrU 8363007 8363363 -1685674 + MDG1_LTR LTR Gypsy 87 442 0 6 648 2634 121 11 54 chrU 8363363 8363810 -1685227 + Gypsy12_LTR LTR Gypsy 1886 2313 -23 6 648 832 206 171 68 chrU 8363805 8364234 -1684803 + HETA LINE telomeric 5441 5910 -171 6 648 3517 0 0 0 chrU 8364446 8364835 -1684202 - HMSBEAGLE_I LTR Gypsy -6140 389 1 6 648 2421 8 0 0 chrU 8364834 8365100 -1683937 - DMLTR5 LTR Gypsy 0 266 1 6 648 540 36 0 12 chrU 8365100 8365183 -1683854 + NTS_DM Other Other 120 201 -39 6 648 21 57 0 0 chrU 8365183 8365218 -1683819 + AT_rich Low_complexity Low_complexity 1 35 0 6 648 870 9 9 27 chrU 8365244 8365355 -1683682 + NTS_DM Other Other 25 133 -107 6 648 851 0 0 0 chrU 8365355 8365451 -1683586 + NTS_DM Other Other 38 133 -107 6 648 1472 20 20 20 chrU 8365451 8365654 -1683383 + NTS_DM Other Other 38 240 0 6 648 1783 21 17 21 chrU 8365654 8365895 -1683142 + NTS_DM Other Other 1 240 0 6 648 1427 6 0 0 chrU 8365895 8366060 -1682977 + NTS_DM Other Other 1 165 -75 6 648 1011 203 0 0 chrU 8366671 8367036 -1682001 + GA-rich Low_complexity Low_complexity 1 365 0 6 648 367 247 329 6 chrU 8367036 8367203 -1681834 - QUASIMODO_I LTR Gypsy -2983 3077 2924 6 648 2137 32 42 28 chrU 8367300 8367587 -1681450 + BATUMI_I LTR Pao 6994 7284 -679 6 648 813 69 0 57 chrU 8367614 8367737 -1681300 + BATUMI_I LTR Pao 127 242 -7721 6 648 2911 42 21 11 chrU 8367873 8368253 -1680784 - BATUMI_I LTR Pao -7579 384 1 6 648 961 38 7 50 chrU 8368253 8368392 -1680645 - BATUMI_LTR LTR Pao 0 272 140 6 648 4284 42 10 47 chrU 8368401 8369021 -1680016 - ROO_I LTR Pao -7098 1158 562 6 648 2179 47 13 54 chrU 8369016 8369330 -1679707 - ROO_I LTR Pao -7955 301 1 6 648 1366 13 0 0 chrU 8369330 8369484 -1679553 - ROO_LTR LTR Pao 0 428 275 6 648 261 103 0 0 chrU 8369584 8369623 -1679414 - BARI1 DNA Tc1 -1709 41 3 6 648 4942 24 2 2 chrU 8369591 8370185 -1678852 + IDEFIX_LTR LTR Gypsy 1 594 0 6 648 4397 33 7 0 chrU 8370649 8371194 -1677843 + IDEFIX_I LTR Gypsy 1 549 -5079 6 648 977 8 8 0 chrU 8371294 8371417 -1677620 - Invader2_I LTR Gypsy -4468 124 1 6 648 2421 4 0 0 chrU 8371417 8371683 -1677354 - Invader2_LTR LTR Gypsy 0 266 1 6 648 847 300 40 40 chrU 8371683 8371769 -1677268 - Gypsy4_I LTR Gypsy -4188 3334 3165 6 648 1527 37 19 0 chrU 8371769 8371983 -1677054 - TLD2 Unknown Unknown 0 218 1 6 648 847 300 40 40 chrU 8371983 8372439 -1676598 - Gypsy4_I LTR Gypsy -4187 3164 2255 6 648 4629 58 86 75 chrU 8373004 8373856 -1675181 - BATUMI_I LTR Pao -7102 861 1 6 648 1729 50 12 29 chrU 8373857 8374102 -1674935 - BATUMI_LTR LTR Pao 0 272 32 6 648 3655 66 0 6 chrU 8374124 8374614 -1674423 - IDEFIX_I LTR Gypsy -2396 3232 2746 6 648 4349 6 20 0 chrU 8374714 8375214 -1673823 - STALKER4_I LTR Gypsy -652 5878 5369 6 648 4641 27 4 0 chrU 8375209 8375765 -1673272 - STALKER4_I LTR Gypsy -1339 5191 4634 6 648 1899 47 133 28 chrU 8375765 8376051 -1672986 - NINJA_LTR LTR Pao -1 316 1 6 648 2336 19 0 0 chrU 8376051 8376322 -1672715 - NINJA_I LTR Pao 0 6011 5741 6 648 1810 288 49 31 chrU 8376436 8378019 -1671018 + SAR_DM Satellite Satellite 1 1610 -216 6 648 3873 214 21 33 chrU 8378119 8379705 -1669332 + SAR_DM Satellite Satellite 1 1567 -203 6 648 237 61 0 29 chrU 8379680 8379714 -1669323 - ARS406_DM Unknown Unknown -164 189 157 6 648 912 70 8 8 chrU 8379817 8379946 -1669091 - BATUMI_I LTR Pao -7834 129 1 6 648 2112 32 3 41 chrU 8379947 8380241 -1668796 - BATUMI_I LTR Pao -679 7284 7002 6 648 1133 190 38 48 chrU 8380241 8380633 -1668404 - TAHRE LINE telomeric -10056 407 20 6 648 3233 192 64 18 chrU 8380669 8381406 -1667631 - TART LINE telomeric -3814 10663 9893 6 648 9994 30 1 0 chrU 8381508 8382677 -1666360 + R2_DM LINE R2 2407 3576 -31 6 648 3695 17 0 0 chrU 8382678 8383096 -1665941 + R1_DM LINE R1 1725 2142 -3214 6 648 2528 94 22 25 chrU 8383196 8384256 -1664781 - DMSAT6 Satellite Satellite -79 1055 1 6 648 2350 81 29 44 chrU 8384279 8384755 -1664282 - DMSAT6 Satellite Satellite -1 469 1 6 648 12955 34 26 2 chrU 8384882 8386467 -1662570 - R1_DM LINE R1 -3095 2261 638 6 648 542 42 0 0 chrU 8386568 8386639 -1662398 + STALKER4_I LTR Gypsy 6460 6530 0 6 648 3319 48 1 14 chrU 8386639 8387078 -1661959 + STALKER4_LTR LTR Gypsy 1 399 -3 6 648 2774 28 0 3 chrU 8388254 8388583 -1660454 + STALKER4_LTR LTR Gypsy 74 401 -1 6 1 306 26 26 0 chrU 8388593 8388619 -1660418 + STALKER4_I LTR Gypsy 1 27 -6503 6 649 306 105 0 50 chrU 8388619 8388679 -1660358 + Stalker2_I LTR Gypsy 1 57 -7345 6 649 1432 57 4 12 chrU 8388748 8388944 -1660093 + STALKER4_LTR LTR Gypsy 227 424 0 6 649 306 26 26 0 chrU 8388934 8388960 -1660077 + STALKER4_I LTR Gypsy 1 27 -6503 6 649 306 105 0 50 chrU 8388960 8389020 -1660017 + Stalker2_I LTR Gypsy 1 57 -7345 6 649 2732 139 49 24 chrU 8389161 8389835 -1659202 + Stalker2_I LTR Gypsy 233 981 -5549 6 649 2573 111 18 25 chrU 8389935 8391512 -1657525 - DMSAT6 Satellite Satellite -67 1565 1 6 649 4087 197 41 19 chrU 8391612 8393186 -1655851 + SAR_DM Satellite Satellite 1 1607 -203 6 649 1050 75 0 0 chrU 8393289 8393435 -1655602 + ARS406_DM Unknown Unknown 44 189 -164 6 649 4357 208 16 24 chrU 8393332 8394864 -1654173 - SAR_DM Satellite Satellite -203 1519 1 6 649 234 36 0 0 chrU 8394964 8394992 -1654045 + ARS406_DM Unknown Unknown 162 189 -164 6 649 4328 208 21 29 chrU 8394968 8396536 -1652501 - SAR_DM Satellite Satellite -281 1555 1 6 649 4826 9 0 4 chrU 8396637 8397189 -1651848 - FW_DM LINE Jockey -4142 550 1 6 649 7379 30 2 12 chrU 8397264 8398208 -1650829 + STALKER4_I LTR Gypsy 818 1942 -4588 6 649 1292 20 0 0 chrU 8398308 8398457 -1650580 - Invader4_I LTR Gypsy -2264 149 1 6 649 3096 14 0 0 chrU 8398457 8398803 -1650234 - Invader4_LTR LTR Gypsy 0 346 1 6 649 555 0 136 0 chrU 8398816 8398971 -1650066 + (TA)n Simple_repeat Simple_repeat 2 177 0 6 649 3064 12 0 0 chrU 8398973 8399315 -1649722 - Invader4_LTR LTR Gypsy -4 342 1 6 649 3720 69 61 18 chrU 8399315 8399875 -1649162 - Invader4_I LTR Gypsy 0 2413 1830 6 649 455 180 153 0 chrU 8399978 8400089 -1648948 - Stalker2_I LTR Gypsy -7033 369 242 6 649 306 105 0 50 chrU 8400257 8400317 -1648720 - Stalker2_I LTR Gypsy -7345 57 1 6 649 345 25 0 0 chrU 8400317 8400344 -1648693 - STALKER4_I LTR Gypsy -6503 27 1 6 649 3441 8 15 2 chrU 8400344 8400741 -1648296 - STALKER4_LTR LTR Gypsy 0 402 1 6 649 4533 129 65 9 chrU 8400741 8401540 -1647497 + TART LINE telomeric 5858 6653 -7824 6 649 1440 294 68 35 chrU 8401645 8403198 -1645839 + SAR_DM Satellite Satellite 1 1603 -217 6 649 4264 197 19 25 chrU 8403301 8404859 -1644178 + SAR_DM Satellite Satellite 1 1548 -203 6 649 492 61 0 0 chrU 8404961 8405027 -1644010 + ARS406_DM Unknown Unknown 91 156 -197 6 649 822 31 0 0 chrU 8405028 8405126 -1643911 + ARS406_DM Unknown Unknown 92 189 -164 6 649 3335 186 16 16 chrU 8405038 8406519 -1642518 - SAR_DM Satellite Satellite -571 1480 1 6 649 4140 199 25 15 chrU 8406619 8408175 -1640862 + SAR_DM Satellite Satellite 1 1572 -203 6 649 4192 234 31 28 chrU 8408275 8411486 -1637551 - SAR_DM Satellite Satellite -264 3220 1 6 649 4316 45 0 2 chrU 8411586 8412101 -1636936 - BS2 LINE Jockey -826 3895 3382 6 649 426 140 321 7 chrU 8412103 8412240 -1636797 - Gypsy_I LTR Gypsy -6327 180 1 6 649 1685 194 75 27 chrU 8412248 8412650 -1636387 - Gypsy_LTR LTR Gypsy -37 445 25 6 649 1086 58 200 0 chrU 8412666 8412821 -1636216 - PROTOP_B DNA P -967 186 1 6 649 1453 174 37 3 chrU 8412843 8413138 -1635899 - Invader1_LTR LTR Gypsy 0 423 119 6 649 13494 6 0 16 chrU 8413239 8414791 -1634246 + G2_DM LINE Jockey 590 2117 -985 6 649 3015 17 0 3 chrU 8414891 8415249 -1633788 + FW_DM LINE Jockey 4336 4692 0 6 649 268 29 0 0 chrU 8415253 8415287 -1633750 - R1_DM LINE R1 -3966 1390 1357 6 649 3873 60 11 8 chrU 8415287 8416099 -1632938 - R1_DM LINE R1 -4150 1206 1 6 649 1861 23 32 0 chrU 8416132 8416351 -1632686 - R1_DM LINE R1 0 5356 5131 6 649 809 42 0 0 chrU 8416346 8416441 -1632596 - R1_DM LINE R1 -1041 4315 4221 6 649 350 213 94 21 chrU 8416620 8416953 -1632084 + (CAAGA)n Simple_repeat Simple_repeat 1 357 0 6 649 390 189 107 0 chrU 8416951 8417110 -1631927 + (AATAG)n Simple_repeat Simple_repeat 5 180 0 6 649 369 228 99 0 chrU 8417044 8417206 -1631831 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 6 649 331 200 100 0 chrU 8417158 8417318 -1631719 + (AATAG)n Simple_repeat Simple_repeat 5 180 0 6 649 406 199 106 0 chrU 8417470 8417688 -1631349 + (CAAGA)n Simple_repeat Simple_repeat 1 241 0 6 649 332 218 98 14 chrU 8417758 8418041 -1630996 + (CAAGA)n Simple_repeat Simple_repeat 1 306 0 6 649 2604 103 24 22 chrU 8418201 8419738 -1629299 + DMSAT6 Satellite Satellite 1 1540 0 6 649 2312 182 6 10 chrU 8419840 8420335 -1628702 - SAR_DM Satellite Satellite -484 988 496 6 649 822 31 0 0 chrU 8420342 8420440 -1628597 + ARS406_DM Unknown Unknown 92 189 -164 6 649 4321 217 20 25 chrU 8420352 8423030 -1626007 - SAR_DM Satellite Satellite -571 2664 1 6 649 2579 81 124 7 chrU 8423130 8423683 -1625354 + TAHRE LINE telomeric 10154 11056 -3421 6 649 5348 175 2 6 chrU 8423696 8424673 -1624364 + HETA LINE telomeric 2734 3706 -2375 6 649 1977 13 18 0 chrU 8424773 8425000 -1624037 - MICROPIA_I LTR Gypsy -4245 231 1 6 649 3996 15 0 61 chrU 8425000 8425507 -1623530 - MICROPIA_LTR LTR Gypsy 0 476 1 6 649 790 114 0 8 chrU 8425507 8425628 -1623409 + TART LINE telomeric 9777 9896 -4581 6 649 42 0 0 0 chrU 8425634 8425676 -1623361 + AT_rich Low_complexity Low_complexity 1 42 0 6 649 795 129 34 13 chrU 8425676 8425825 -1623212 - BS2 LINE Jockey 0 4721 4570 6 649 540 96 0 0 chrU 8425825 8425898 -1623139 + BS2 LINE Jockey 2141 2213 -2508 6 649 1093 40 149 0 chrU 8425897 8426045 -1622992 + BS2 LINE Jockey 2419 2588 -2133 6 649 1207 217 7 18 chrU 8426035 8426316 -1622721 + TAHRE LINE telomeric 9703 9980 -483 6 649 25 31 0 0 chrU 8426642 8426674 -1622363 + AT_rich Low_complexity Low_complexity 1 32 0 6 649 397 147 577 0 chrU 8426938 8427073 -1621964 - DNAREP1_DM LINE Penelope 0 594 381 6 649 1770 0 0 0 chrU 8427073 8427271 -1621766 - Copia2_LTR_DM LTR Copia 0 198 1 6 649 522 145 0 0 chrU 8427271 8427353 -1621684 - DNAREP1_DM LINE Penelope -209 385 304 6 649 4369 187 33 26 chrU 8428057 8429583 -1619454 + SAR_DM Satellite Satellite 1 1535 -225 6 649 403 174 10 30 chrU 8429497 8429598 -1619439 - XDMR_DM Unknown Unknown 0 360 262 6 649 1125 128 0 7 chrU 8429698 8430444 -1618593 + (CATA)n Simple_repeat Simple_repeat 1 740 0 6 649 947 157 0 6 chrU 8430454 8430634 -1618403 + (TA)n Simple_repeat Simple_repeat 2 180 0 6 649 620 153 0 8 chrU 8430654 8430773 -1618264 + (CATA)n Simple_repeat Simple_repeat 3 120 0 6 649 251 225 0 70 chrU 8430774 8430860 -1618177 - OSVALDO_LTR LTR Gypsy -1105 91 12 6 649 246 128 0 0 chrU 8430862 8430901 -1618136 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 649 965 159 0 18 chrU 8430898 8431238 -1617799 + (CATA)n Simple_repeat Simple_repeat 1 333 0 6 649 3257 72 60 2 chrU 8431338 8432162 -1616875 + PROTOP_A DNA P 340 1077 -28 6 649 34 0 0 0 chrU 8432526 8432560 -1616477 + AT_rich Low_complexity Low_complexity 1 34 0 6 649 4286 192 18 26 chrU 8432988 8434516 -1614521 - SAR_DM Satellite Satellite -535 1515 1 6 649 13294 20 19 0 chrU 8434616 8436150 -1612887 + R2_DM LINE R2 1755 3317 -290 6 649 7003 66 69 0 chrU 8436250 8437189 -1611848 + Baggins1 LINE LOA 4450 5453 0 6 649 25 65 0 0 chrU 8437720 8437766 -1611271 + AT_rich Low_complexity Low_complexity 1 46 0 6 649 4218 194 31 30 chrU 8437905 8439280 -1609757 + SAR_DM Satellite Satellite 1 1375 -203 6 649 707 144 0 0 chrU 8439295 8439413 -1609624 + SAR_DM Satellite Satellite 547 664 -808 6 649 1712 131 134 35 chrU 8439910 8440348 -1608689 + IDEFIX_LTR LTR Gypsy 65 594 0 6 649 24 0 0 0 chrU 8440540 8440564 -1608473 + AT_rich Low_complexity Low_complexity 1 24 0 6 649 1378 19 0 0 chrU 8440888 8441048 -1607989 + IDEFIX_I LTR Gypsy 1 160 -5468 6 649 4432 204 20 26 chrU 8441149 8442670 -1606367 + SAR_DM Satellite Satellite 1 1511 -203 6 649 324 235 45 45 chrU 8443234 8443333 -1605704 - HMSBEAGLE_I LTR Gypsy -2971 3558 3482 6 649 264 167 0 0 chrU 8443356 8443410 -1605627 - DM297_I LTR Gypsy -3741 2426 2373 6 649 21 82 0 0 chrU 8443961 8444010 -1605027 + AT_rich Low_complexity Low_complexity 1 49 0 6 649 23 0 0 0 chrU 8444141 8444164 -1604873 + AT_rich Low_complexity Low_complexity 1 23 0 6 649 7720 32 16 0 chrU 8444404 8445329 -1603708 + DMCR1A LINE CR1 3528 4467 -3 6 649 327 297 40 20 chrU 8445773 8445924 -1603113 + Gypsy5_I LTR Gypsy 2189 2342 -4167 6 649 503 131 36 0 chrU 8446045 8446129 -1602908 - NTS_DM Other Other -150 90 4 6 649 1352 12 0 18 chrU 8446239 8446404 -1602633 - NTS_DM Other Other -78 162 1 6 649 1825 21 17 17 chrU 8446404 8446644 -1602393 - NTS_DM Other Other 0 240 1 6 649 1485 20 20 20 chrU 8446644 8446847 -1602190 - NTS_DM Other Other 0 240 38 6 649 854 0 0 0 chrU 8446847 8446943 -1602094 - NTS_DM Other Other -107 133 38 6 649 2429 4 0 4 chrU 8446955 8447231 -1601806 + BURDOCK_LTR LTR Gypsy 1 275 0 6 649 2748 6 0 0 chrU 8447231 8447556 -1601481 + BURDOCK_I LTR Gypsy 1 325 -5535 6 649 1409 204 157 30 chrU 8447658 8448124 -1600913 - Gypsy12_LTR LTR Gypsy -648 1688 1164 6 649 2715 229 91 71 chrU 8448142 8449181 -1599856 - Gypsy12_LTR LTR Gypsy -1258 1078 19 6 649 4371 202 18 22 chrU 8449281 8450805 -1598232 - SAR_DM Satellite Satellite -446 1517 1 6 649 649 56 0 82 chrU 8452528 8452625 -1596412 - MAX_I LTR Pao -7825 89 1 6 649 1843 107 74 0 chrU 8452625 8452924 -1596113 - MAX_LTR LTR Pao 0 321 1 6 649 645 99 0 0 chrU 8452931 8453032 -1596005 - MAX_I LTR Pao -2 7912 7812 6 649 7646 42 19 24 chrU 8453036 8454049 -1594988 - MAX_I LTR Pao -357 7557 6550 6 649 285 192 0 0 chrU 8454153 8454220 -1594817 - DM297_I LTR Gypsy -3741 2426 2372 6 649 1053 54 47 0 chrU 8454398 8454546 -1594491 - IDEFIX_LTR LTR Gypsy -439 155 1 6 649 6450 60 16 0 chrU 8454556 8455425 -1593612 - IDEFIX_I LTR Gypsy -518 5110 4228 6 649 2087 16 0 0 chrU 8455424 8455666 -1593371 - IDEFIX_I LTR Gypsy -4323 1305 1064 6 649 870 136 0 0 chrU 8455769 8455909 -1593128 + ARS406_DM Unknown Unknown 47 186 -167 6 649 3789 214 39 17 chrU 8455809 8457211 -1591826 - SAR_DM Satellite Satellite -203 1432 1 6 649 555 159 0 34 chrU 8457110 8457227 -1591810 + ARS406_DM Unknown Unknown 1 113 -240 6 649 394 119 30 0 chrU 8457222 8457289 -1591748 - SAR_DM Satellite Satellite -665 807 739 6 649 4309 200 15 28 chrU 8457392 8458908 -1590129 - SAR_DM Satellite Satellite -216 1497 1 6 649 1214 84 0 6 chrU 8459220 8459387 -1589650 - STALKER4_I LTR Gypsy -694 5836 5671 6 649 549 126 0 11 chrU 8459387 8459475 -1589562 - STALKER4_I LTR Gypsy -1054 5476 5390 6 649 3217 184 110 61 chrU 8459470 8460526 -1588511 - Gypsy11_I LTR Gypsy -2331 1193 87 6 649 1068 72 0 7 chrU 8460626 8460779 -1588258 + ARS406_DM Unknown Unknown 38 189 -164 6 649 4546 196 21 27 chrU 8460675 8462117 -1586920 - SAR_DM Satellite Satellite -203 1434 1 6 649 805 99 0 0 chrU 8462021 8462142 -1586895 + ARS406_DM Unknown Unknown 1 121 -232 6 649 5600 40 43 31 chrU 8462242 8463024 -1586013 + PROTOP_A DNA P 314 1105 0 6 649 739 322 55 36 chrU 8463118 8463739 -1585298 - ZAM_I LTR Gypsy -1887 5603 5011 6 649 1020 212 0 8 chrU 8463855 8463930 -1585107 - SAR_DM Satellite Satellite -396 1076 832 6 649 1264 58 6 0 chrU 8463930 8464102 -1584935 + ARS406_DM Unknown Unknown 1 173 -180 6 649 4047 211 24 32 chrU 8464122 8465365 -1583672 - SAR_DM Satellite Satellite -261 1232 1 6 649 717 109 0 0 chrU 8465465 8465575 -1583462 - ARS406_DM Unknown Unknown -243 110 1 6 649 4453 201 21 28 chrU 8465482 8466974 -1582063 + SAR_DM Satellite Satellite 1 1482 -203 6 649 891 88 8 32 chrU 8467074 8467322 -1581715 + (CTATT)n Simple_repeat Simple_repeat 1 242 0 6 649 1428 100 1 7 chrU 8467362 8468089 -1580948 + (CTATT)n Simple_repeat Simple_repeat 1 722 0 6 649 202 71 0 0 chrU 8468090 8468118 -1580919 + (TTATA)n Simple_repeat Simple_repeat 1 28 0 6 649 1283 97 11 7 chrU 8468128 8468574 -1580463 + (CTATT)n Simple_repeat Simple_repeat 1 448 0 6 649 3560 0 0 5 chrU 8468682 8469082 -1579955 + Copia_I LTR Copia 4196 4593 0 6 649 2405 0 0 0 chrU 8469082 8469358 -1579679 + Copia_LTR LTR Copia 1 276 0 6 649 5787 89 19 0 chrU 8469358 8470186 -1578851 - STALKER4_I LTR Gypsy -322 6208 5365 6 649 1324 19 0 12 chrU 8470297 8470458 -1578579 - MICROPIA_I LTR Gypsy -4317 159 1 6 649 3962 15 2 61 chrU 8470458 8470964 -1578073 - MICROPIA_LTR LTR Gypsy 0 476 1 6 649 2438 202 88 5 chrU 8470964 8471561 -1577476 + Gypsy5_I LTR Gypsy 5437 6083 -426 6 649 2067 16 4 0 chrU 8471548 8471790 -1577247 + G2_DM LINE Jockey 2615 2857 -245 6 649 1190 114 6 6 chrU 8471890 8472067 -1576970 + HMSBEAGLE_I LTR Gypsy 5009 5185 -1344 6 649 761 118 0 0 chrU 8472067 8472177 -1576860 + HMSBEAGLE_I LTR Gypsy 4603 4712 -1817 6 649 415 159 0 0 chrU 8472189 8472252 -1576785 + HMSBEAGLE_I LTR Gypsy 5063 5125 -1404 6 649 2192 186 0 2 chrU 8472252 8472652 -1576385 + HMSBEAGLE_I LTR Gypsy 5421 5819 -710 6 649 922 251 68 40 chrU 8472991 8473361 -1575676 + HMSBEAGLE_I LTR Gypsy 5804 6183 -346 6 649 493 286 177 30 chrU 8473496 8473936 -1575101 + Copia_I LTR Copia 3578 4082 -511 6 649 308 183 11 0 chrU 8474079 8474172 -1574865 + (TAA)n Simple_repeat Simple_repeat 1 94 0 6 649 615 118 31 10 chrU 8474204 8474332 -1574705 + PROTOP_A DNA P 695 796 -309 6 649 1058 78 84 0 chrU 8474334 8474500 -1574537 + PROTOP DNA P 4295 4478 -2 6 649 25 31 0 0 chrU 8474883 8474915 -1574122 + AT_rich Low_complexity Low_complexity 1 32 0 6 649 10985 56 41 9 chrU 8475086 8476578 -1572459 + BATUMI_I LTR Pao 2734 4272 -3691 6 649 976 67 0 0 chrU 8476678 8476812 -1572225 + ARS406_DM Unknown Unknown 56 189 -164 6 649 4250 206 24 26 chrU 8476731 8478147 -1570890 - SAR_DM Satellite Satellite -225 1413 1 6 649 705 112 9 0 chrU 8478054 8478170 -1570867 + ARS406_DM Unknown Unknown 1 117 -236 6 649 260 150 0 0 chrU 8478446 8478486 -1570551 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 649 252 150 0 0 chrU 8478538 8478578 -1570459 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 649 249 175 0 0 chrU 8478630 8478670 -1570367 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 649 260 150 0 0 chrU 8478722 8478762 -1570275 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 649 240 175 0 0 chrU 8478814 8478854 -1570183 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 649 252 150 0 0 chrU 8478906 8478946 -1570091 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 649 249 175 0 0 chrU 8478998 8479038 -1569999 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 649 5413 13 0 8 chrU 8479118 8479760 -1569277 - G_DM LINE Jockey -1 4345 3709 6 649 4438 190 20 28 chrU 8479860 8481342 -1567695 + SAR_DM Satellite Satellite 1 1470 -203 6 649 4396 198 26 28 chrU 8481470 8482934 -1566103 - SAR_DM Satellite Satellite -396 1460 1 6 649 2438 106 23 28 chrU 8483588 8484518 -1564519 - DMSAT6 Satellite Satellite -65 925 1 6 649 1374 50 17 68 chrU 8484624 8484858 -1564179 + PROTOP_A DNA P 575 796 -309 6 649 521 0 0 0 chrU 8484862 8484920 -1564117 + Gypsy12_LTR LTR Gypsy 2279 2336 0 6 649 1699 210 33 3 chrU 8484920 8485287 -1563750 - Gypsy12_I LTR Gypsy -3768 1778 1401 6 649 1214 194 44 118 chrU 8485375 8485825 -1563212 - Gypsy12_I LTR Gypsy -1448 832 416 6 649 668 110 144 0 chrU 8485993 8486111 -1562926 - Gypsy12_I LTR Gypsy -1975 305 171 6 649 2101 60 66 0 chrU 8486213 8486642 -1562395 - PROTOP_B DNA P -399 754 420 6 649 4784 37 2 0 chrU 8486642 8487235 -1561802 - PROTOP_A DNA P 0 1105 512 6 649 2945 25 0 17 chrU 8487232 8487590 -1561447 - PROTOP_A DNA P -753 352 1 6 649 814 58 0 0 chrU 8487590 8487692 -1561345 - Gypsy12_I LTR Gypsy -4631 915 814 6 649 1907 114 44 30 chrU 8487817 8488178 -1560859 + ROVER-LTR_DM LTR Gypsy 1 366 -1 6 649 180 0 0 0 chrU 8488178 8488198 -1560839 + (TA)n Simple_repeat Simple_repeat 1 20 0 6 649 2343 109 168 4 chrU 8488427 8489106 -1559931 + NINJA_I LTR Pao 4751 5540 -471 6 649 1015 95 114 0 chrU 8489122 8489280 -1559757 - DNAREP1_DM LINE Penelope -3 591 416 6 649 4310 197 35 32 chrU 8489380 8490849 -1558188 - SAR_DM Satellite Satellite -302 1472 1 6 649 1749 64 0 13 chrU 8490962 8491200 -1557837 - PROTOP DNA P -4172 308 74 6 649 23 68 0 0 chrU 8492390 8492434 -1556603 + AT_rich Low_complexity Low_complexity 1 44 0 6 649 4407 190 19 26 chrU 8492541 8494019 -1555018 - SAR_DM Satellite Satellite -487 1467 1 6 649 860 106 0 0 chrU 8494119 8494251 -1554786 - ARS406_DM Unknown Unknown -221 132 1 6 649 4156 179 20 20 chrU 8494158 8495595 -1553442 + SAR_DM Satellite Satellite 1 1437 -255 6 649 3509 146 10 13 chrU 8495699 8496322 -1552715 + TAHRE LINE telomeric 9843 10463 0 6 649 1771 152 4 34 chrU 8496311 8496740 -1552297 + HETA LINE telomeric 1 616 -5465 6 649 1826 152 11 50 chrU 8496709 8497166 -1551871 + HETA LINE telomeric 39 477 -5604 6 649 12437 31 1 0 chrU 8497270 8498744 -1550293 - MAX_I LTR Pao -1504 6410 4935 6 649 3978 200 22 16 chrU 8498844 8500000 -1549037 + SAR_DM Satellite Satellite 1 1162 -203 6 649 1392 170 32 16 chrU 8500002 8500313 -1548724 + SAR_DM Satellite Satellite 295 610 -862 6 649 2987 41 76 0 chrU 8501023 8501416 -1547621 + PROTOP DNA P 1 423 -4057 6 649 3972 19 0 6 chrU 8501418 8501888 -1547149 + PROTOP DNA P 1 466 -4014 6 649 504 0 0 0 chrU 8501988 8502044 -1546993 + (TTCTC)n Simple_repeat Simple_repeat 5 60 0 6 649 2401 8 0 0 chrU 8502429 8502695 -1546342 + Invader2_LTR LTR Gypsy 1 266 0 6 649 419 247 82 75 chrU 8502726 8502993 -1546044 - NINJA_LTR LTR Pao -48 269 1 6 649 1072 95 286 5 chrU 8503011 8503231 -1545806 - NINJA_I LTR Pao -99 5912 5631 6 649 1552 87 112 9 chrU 8503226 8503459 -1545578 - NINJA_I LTR Pao -595 5416 5160 6 649 2125 96 17 3 chrU 8503561 8503917 -1545120 + DM297_I LTR Gypsy 934 1294 -4873 6 649 21 0 0 0 chrU 8503926 8503947 -1545090 + AT_rich Low_complexity Low_complexity 1 21 0 6 649 1493 88 32 0 chrU 8503950 8504167 -1544870 + DM297_I LTR Gypsy 5098 5321 -846 6 649 527 114 176 63 chrU 8504163 8504291 -1544746 + DM297_I LTR Gypsy 5446 5563 -604 6 649 183 42 0 0 chrU 8504291 8504315 -1544722 + (TATAG)n Simple_repeat Simple_repeat 2 25 0 6 649 527 114 176 63 chrU 8504315 8504345 -1544692 + DM297_I LTR Gypsy 5564 5621 -546 6 649 1659 99 55 0 chrU 8504339 8504592 -1544445 + BS2 LINE Jockey 4455 4721 0 6 649 27 0 0 0 chrU 8504592 8504619 -1544418 + AT_rich Low_complexity Low_complexity 1 27 0 6 649 2454 94 0 13 chrU 8504643 8505030 -1544007 + DM297_I LTR Gypsy 5640 6021 -146 6 649 342 332 41 42 chrU 8505275 8505624 -1543413 - Gypsy6_I LTR Gypsy -5228 1784 1476 6 649 2103 189 69 79 chrU 8505931 8506599 -1542438 - Gypsy12_LTR LTR Gypsy -750 1586 926 6 649 875 68 7 33 chrU 8506700 8506852 -1542185 - IDEFIX_I LTR Gypsy -5034 594 447 6 649 25 0 0 0 chrU 8506924 8506949 -1542088 + AT_rich Low_complexity Low_complexity 1 25 0 6 649 227 53 0 26 chrU 8507124 8507163 -1541874 - IDEFIX_LTR LTR Gypsy -42 552 515 6 649 2052 38 0 68 chrU 8507173 8507483 -1541554 - IDEFIX_LTR LTR Gypsy -303 291 3 6 649 4681 49 78 9 chrU 8507493 8508169 -1540868 - IDEFIX_I LTR Gypsy -5 5623 4901 6 649 415 108 0 108 chrU 8508269 8508352 -1540685 - Gypsy6A_LTR LTR Gypsy -346 74 1 6 649 33 25 0 0 chrU 8508415 8508455 -1540582 + AT_rich Low_complexity Low_complexity 1 40 0 6 649 914 43 0 9 chrU 8509622 8509738 -1539299 + DIVER2_I LTR Pao 1366 1480 -2667 6 649 6301 15 34 1 chrU 8509838 8510820 -1538217 + Invader2_I LTR Gypsy 2509 3522 -1070 6 649 4060 20 2 0 chrU 8510819 8511306 -1537731 + Invader2_I LTR Gypsy 3634 4121 -471 6 649 7386 145 99 24 chrU 8511406 8512845 -1536192 - TAHRE LINE telomeric -8583 1880 335 6 649 47 0 0 0 chrU 8513409 8513456 -1535581 + AT_rich Low_complexity Low_complexity 1 47 0 6 649 7952 22 13 4 chrU 8513472 8514439 -1534598 + MDG3_I LTR Gypsy 2470 3445 -1541 6 649 384 308 39 39 chrU 8514861 8515099 -1533938 - Gypsy3_I LTR Gypsy -4812 1365 1179 6 649 3598 161 80 49 chrU 8516116 8516969 -1532068 + Gypsy12_LTR LTR Gypsy 1456 2334 -2 6 649 286 152 0 29 chrU 8516998 8517050 -1531987 + ACCORD2_I LTR Gypsy 1831 1880 -5332 6 649 4351 25 0 0 chrU 8517050 8517566 -1531471 - PROTOP_A DNA P 0 1105 590 6 649 1042 26 25 25 chrU 8517666 8517826 -1531211 + NTS_DM Other Other 81 240 0 6 649 1817 17 17 17 chrU 8517826 8518064 -1530973 + NTS_DM Other Other 1 238 -2 6 649 1813 21 17 17 chrU 8518066 8518306 -1530731 + NTS_DM Other Other 1 240 0 6 649 1915 8 17 13 chrU 8518306 8518545 -1530492 + NTS_DM Other Other 1 240 0 6 649 1926 4 17 13 chrU 8518545 8518784 -1530253 + NTS_DM Other Other 1 240 0 6 649 1345 6 0 18 chrU 8518784 8518949 -1530088 + NTS_DM Other Other 1 162 -78 6 649 428 75 29 15 chrU 8519059 8519127 -1529910 + NTS_DM Other Other 4 72 -168 6 649 2290 57 0 0 chrU 8519228 8519510 -1529527 + ZAM_I LTR Gypsy 1403 1684 -5806 6 649 22 80 0 0 chrU 8519565 8519615 -1529422 + AT_rich Low_complexity Low_complexity 1 50 0 6 650 227 284 69 69 chrU 8520521 8520623 -1528414 - BLASTOPIA_I LTR Gypsy -790 3691 3590 6 650 330 0 0 0 chrU 8520790 8520828 -1528209 + NOMAD_I LTR Gypsy 6535 6572 0 6 650 4715 2 0 0 chrU 8520828 8521346 -1527691 + NOMAD_LTR LTR Gypsy 1 518 0 6 650 3759 187 17 25 chrU 8521346 8522251 -1526786 + SAR_DM Satellite Satellite 1 897 -216 6 650 4398 191 19 29 chrU 8522351 8523793 -1525244 + SAR_DM Satellite Satellite 1 1427 -198 6 650 790 139 0 0 chrU 8523682 8523811 -1525226 - ARS406_DM Unknown Unknown -164 189 61 6 650 4803 4 78 0 chrU 8523916 8524479 -1524558 - QUASIMODO_LTR LTR Gypsy -51 607 1 6 650 31 0 0 0 chrU 8524507 8524538 -1524499 + AT_rich Low_complexity Low_complexity 1 31 0 6 650 326 310 75 40 chrU 8524581 8525004 -1524033 - DM297_I LTR Gypsy -3173 2687 2255 6 650 559 221 199 0 chrU 8525065 8525221 -1523816 - TIRANT_I LTR Gypsy -3752 3940 3777 6 650 2563 267 42 27 chrU 8525471 8526388 -1522649 - G6_DM LINE Jockey -869 1173 243 6 650 945 41 0 0 chrU 8526553 8526674 -1522363 - NINJA_I LTR Pao -205 5806 5686 6 650 1395 50 0 0 chrU 8526674 8526854 -1522183 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 6 650 351 98 0 0 chrU 8526868 8526929 -1522108 + (TATTG)n Simple_repeat Simple_repeat 5 65 0 6 650 1418 114 73 6 chrU 8527029 8527366 -1521671 + DMRT1C LINE R1 4204 4614 -829 6 650 1835 19 0 18 chrU 8527366 8527585 -1521452 - ACCORD2_LTR LTR Gypsy 0 215 1 6 650 2752 30 6 0 chrU 8527585 8527916 -1521121 - ACCORD2_I LTR Gypsy -10 7202 6870 6 650 5033 12 0 2 chrU 8527916 8528485 -1520552 - ACCORD2_I LTR Gypsy -2395 4817 4250 6 650 2355 4 0 0 chrU 8528585 8528857 -1520180 + FW_DM LINE Jockey 4421 4692 0 6 650 1859 185 78 71 chrU 8528895 8529443 -1519594 - DNAREP1_DM LINE Penelope -6 588 37 6 650 551 175 70 0 chrU 8529458 8529572 -1519465 - DNAREP1_DM LINE Penelope -115 479 358 6 650 210 225 21 53 chrU 8529819 8529913 -1519124 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 6 650 5165 5 0 2 chrU 8530140 8530721 -1518316 - FW_DM LINE Jockey -3693 999 420 6 650 4245 200 30 24 chrU 8530716 8533122 -1515915 - SAR_DM Satellite Satellite -428 2420 1 6 650 4460 196 20 28 chrU 8533254 8534693 -1514344 - SAR_DM Satellite Satellite -300 1426 1 6 650 7213 33 54 0 chrU 8534797 8535732 -1513305 + IDEFIX_I LTR Gypsy 250 1235 -4393 6 650 4238 33 6 0 chrU 8535732 8536248 -1512789 - TRANSIB2 DNA Transib 0 2844 2326 6 650 21 57 0 0 chrU 8536483 8536518 -1512519 + AT_rich Low_complexity Low_complexity 1 35 0 6 650 243 354 31 20 chrU 8536788 8536984 -1512053 + ACCORD2_I LTR Gypsy 558 755 -6457 6 650 2343 108 139 34 chrU 8537008 8537447 -1511590 - Gypsy12_I LTR Gypsy -4799 747 263 6 650 2483 119 0 0 chrU 8537446 8537798 -1511239 - Gypsy12_I LTR Gypsy -2582 2964 2613 6 650 5636 195 37 60 chrU 8537927 8539347 -1509690 + ROVER-I_DM LTR Gypsy 5053 6440 -144 6 650 1928 182 27 31 chrU 8539470 8539884 -1509153 - Gypsy12_LTR LTR Gypsy -1924 412 1 6 650 3628 41 87 0 chrU 8539884 8540487 -1508550 + DIVER2_I LTR Pao 2996 3651 -496 6 650 1059 224 21 111 chrU 8540504 8540890 -1508147 + Gypsy12_LTR LTR Gypsy 261 611 -1725 6 650 1578 10 0 0 chrU 8541003 8541205 -1507832 + (AATAG)n Simple_repeat Simple_repeat 1 202 0 6 650 909 110 90 0 chrU 8541213 8541358 -1507679 - Copia2_LTR_DM LTR Copia 0 198 41 6 650 1252 99 0 32 chrU 8541371 8541589 -1507448 - Copia2_I LTR Copia 0 4162 3952 6 650 1109 176 19 47 chrU 8541645 8541902 -1507135 - Gypsy5_LTR LTR Gypsy -180 250 1 6 650 2392 164 34 89 chrU 8541902 8542439 -1506598 - Gypsy5_I LTR Gypsy 0 6509 6003 6 650 2567 99 38 25 chrU 8542539 8543982 -1505055 + DMSAT6 Satellite Satellite 1 1462 -64 6 650 8877 100 59 33 chrU 8544084 8545527 -1503510 - Gypsy12_I LTR Gypsy -3857 1689 210 6 650 4226 210 16 26 chrU 8545627 8547058 -1501979 - SAR_DM Satellite Satellite -217 1416 1 6 650 4054 244 38 47 chrU 8547168 8548499 -1500538 - Gypsy12_LTR LTR Gypsy -1017 1319 1 6 650 888 28 9 0 chrU 8548499 8548608 -1500429 - Gypsy12_I LTR Gypsy 0 5546 5437 6 650 3357 13 0 0 chrU 8548708 8549093 -1499944 + HETA LINE telomeric 5692 6076 -5 6 650 298 200 76 22 chrU 8549131 8549223 -1499814 + DNAREP1_DM LINE Penelope 341 437 -157 6 650 276 83 0 0 chrU 8549245 8549281 -1499756 + DNAREP1_DM LINE Penelope 553 588 -6 6 650 2122 0 4 0 chrU 8550246 8550495 -1498542 + Copia_LTR LTR Copia 27 276 0 6 650 331 355 17 9 chrU 8550498 8550731 -1498306 - BURDOCK_I LTR Gypsy -4889 971 737 6 650 3885 266 35 11 chrU 8551809 8553217 -1495820 - QUASIMODO_I LTR Gypsy -1871 4189 2748 6 650 3137 93 6 4 chrU 8553317 8553814 -1495223 - S_DM DNA Tc1 -1238 498 1 6 650 1441 142 202 132 chrU 8554065 8554664 -1494373 + MAX_I LTR Pao 557 1197 -6717 6 650 1179 0 0 0 chrU 8554850 8554979 -1494058 + MAX_LTR LTR Pao 193 321 0 6 650 1567 10 40 10 chrU 8554979 8555181 -1493856 + Invader2_I LTR Gypsy 4385 4592 0 6 650 2409 4 0 0 chrU 8555181 8555447 -1493590 + Invader2_LTR LTR Gypsy 1 266 0 6 650 6872 20 21 0 chrU 8555447 8556281 -1492756 - ROO_I LTR Pao -4382 3874 3023 6 650 3334 13 0 13 chrU 8556382 8556778 -1492259 + DOC2_DM LINE Jockey 4403 4793 0 6 650 3993 190 15 19 chrU 8556768 8557814 -1491223 - SAR_DM Satellite Satellite -347 1042 1 6 650 21 0 0 0 chrU 8558443 8558464 -1490573 + AT_rich Low_complexity Low_complexity 1 21 0 6 650 915 18 0 0 chrU 8559237 8559346 -1489691 + (TCTTG)n Simple_repeat Simple_repeat 5 113 0 6 650 1033 9 1 0 chrU 8559446 8559576 -1489461 + MICROPIA_LTR LTR Gypsy 15 232 -244 6 650 371 0 0 0 chrU 8559605 8559647 -1489390 + MICROPIA_LTR LTR Gypsy 232 273 -203 6 650 871 20 0 0 chrU 8559647 8559746 -1489291 + MICROPIA_I LTR Gypsy 1973 2071 -2405 6 650 6676 50 58 8 chrU 8559756 8560876 -1488161 + IDEFIX_I LTR Gypsy 1787 2962 -2666 6 650 482 120 40 0 chrU 8560980 8561055 -1487982 + Gypsy12_I LTR Gypsy 4891 4968 -578 6 650 1346 82 168 10 chrU 8561047 8561256 -1487781 + Gypsy12_I LTR Gypsy 5305 5546 0 6 650 3067 238 66 60 chrU 8561256 8562398 -1486639 + Gypsy12_LTR LTR Gypsy 1 1149 -1187 6 650 9020 88 62 1 chrU 8562631 8563933 -1485104 + TART LINE telomeric 1 1382 -13095 6 650 5197 21 71 16 chrU 8564035 8564514 -1484523 + ACCORD2_I LTR Gypsy 666 1143 -6069 6 650 233 75 25 0 chrU 8564514 8564554 -1484483 + (TAA)n Simple_repeat Simple_repeat 2 42 0 6 650 5197 21 71 16 chrU 8564554 8564740 -1484297 + ACCORD2_I LTR Gypsy 1144 1367 -5845 6 650 4503 29 54 26 chrU 8564821 8565464 -1483573 + ACCORD2_I LTR Gypsy 1507 2167 -5045 6 650 3215 185 41 16 chrU 8565564 8566989 -1482048 - SAR_DM Satellite Satellite -539 1459 1 6 650 4229 203 27 28 chrU 8567090 8568513 -1480524 + SAR_DM Satellite Satellite 1 1420 -217 6 650 930 18 0 9 chrU 8568613 8568727 -1480310 + MICROPIA_I LTR Gypsy 4364 4476 0 6 650 1633 5 0 0 chrU 8568727 8568913 -1480124 + MICROPIA_LTR LTR Gypsy 1 186 -290 6 650 1052 16 0 8 chrU 8568918 8569042 -1479995 + MICROPIA_LTR LTR Gypsy 354 476 0 6 650 1880 88 74 48 chrU 8569042 8569350 -1479687 - ACCORD2_I LTR Gypsy -6896 316 1 6 650 3318 99 27 0 chrU 8569473 8569997 -1479040 - ACCORD2_I LTR Gypsy -16 7196 6659 6 650 3720 37 53 87 chrU 8570137 8570723 -1478314 - NINJA_I LTR Pao -5445 566 1 6 650 2205 50 45 23 chrU 8570724 8571033 -1478004 - NINJA_LTR LTR Pao -1 316 1 6 650 10699 46 48 14 chrU 8571663 8573085 -1475952 + DIVER2_I LTR Pao 865 2335 -1812 6 650 644 123 0 0 chrU 8573185 8573291 -1475746 - ARS406_DM Unknown Unknown -247 106 1 6 650 4117 204 29 29 chrU 8573198 8574608 -1474429 + SAR_DM Satellite Satellite 1 1409 -225 6 650 7694 28 4 3 chrU 8574710 8575630 -1473407 + CIRCE LINE Composite 4060 4980 -1376 6 650 1098 36 0 0 chrU 8575989 8576129 -1472908 + CIRCE LINE Composite 4981 5120 -1236 6 650 4139 197 17 26 chrU 8576230 8576486 -1472551 - SAR_DM Satellite Satellite -601 1407 1140 6 650 336 202 13 0 chrU 8576486 8576565 -1472472 + XDMR Unknown Unknown 282 361 0 6 650 4139 197 17 26 chrU 8576565 8577650 -1471387 - SAR_DM Satellite Satellite -601 1139 1 6 650 4388 195 16 25 chrU 8577751 8579152 -1469885 + SAR_DM Satellite Satellite 1 1387 -203 6 650 352 206 10 19 chrU 8579066 8579170 -1469867 - XDMR_DM Unknown Unknown 0 360 258 6 650 4879 11 0 0 chrU 8579270 8579821 -1469216 - FW_DM LINE Jockey -3540 1152 602 6 650 4003 123 13 5 chrU 8579927 8580549 -1468488 - HETA LINE telomeric -2894 3187 2561 6 650 606 239 0 0 chrU 8580546 8580684 -1468353 - HETA LINE telomeric -4691 1390 1253 6 650 3994 9 0 2 chrU 8580786 8581245 -1467792 - QUASIMODO_LTR LTR Gypsy -200 458 1 6 650 2123 103 135 45 chrU 8581248 8581758 -1467279 - BATUMI_I LTR Pao -7281 682 127 6 650 1821 26 21 21 chrU 8581791 8582026 -1467011 - BATUMI_I LTR Pao -679 7284 7050 6 650 90 10 0 0 chrU 8582026 8582123 -1466914 + AT_rich Low_complexity Low_complexity 1 97 0 6 650 215 157 42 14 chrU 8582123 8582194 -1466843 + (TA)n Simple_repeat Simple_repeat 1 73 0 6 650 2411 112 122 45 chrU 8582325 8582922 -1466115 - BATUMI_I LTR Pao -7194 769 127 6 650 1773 18 53 22 chrU 8582955 8583183 -1465854 - BATUMI_I LTR Pao -679 7284 7050 6 650 121 8 0 0 chrU 8583183 8583311 -1465726 + AT_rich Low_complexity Low_complexity 1 128 0 6 650 215 157 42 14 chrU 8583311 8583382 -1465655 + (TA)n Simple_repeat Simple_repeat 1 73 0 6 650 2566 37 3 18 chrU 8583388 8583718 -1465319 - BATUMI_I LTR Pao -5889 2074 1750 6 650 1270 56 12 35 chrU 8583818 8584015 -1465022 - BATUMI_I LTR Pao -72 200 35 6 650 3845 66 143 5 chrU 8584015 8584596 -1464441 - BATUMI_I LTR Pao 0 7963 7303 6 650 2030 45 216 11 chrU 8584619 8585095 -1463942 + BATUMI_I LTR Pao 6427 7000 -963 6 650 893 54 0 0 chrU 8585122 8585233 -1463804 - BATUMI_I LTR Pao -1543 6420 6310 6 650 3879 184 16 25 chrU 8585334 8586717 -1462320 + SAR_DM Satellite Satellite 1 1370 -396 6 650 415 205 9 18 chrU 8586631 8586745 -1462292 - XDMR_DM Unknown Unknown 0 360 248 6 650 2755 23 11 19 chrU 8586845 8587205 -1461832 - BATUMI_I LTR Pao -1087 6876 6520 6 650 2161 25 3 28 chrU 8587198 8587481 -1461556 + BATUMI_I LTR Pao 7009 7284 -679 6 650 24 0 0 0 chrU 8587865 8587889 -1461148 + AT_rich Low_complexity Low_complexity 1 24 0 6 650 3443 13 0 0 chrU 8588357 8588747 -1460290 + PROTOP_A DNA P 716 1105 0 6 650 2928 60 43 0 chrU 8588747 8589139 -1459898 + DOC3_DM LINE Jockey 4331 4739 -1 6 650 1336 138 75 0 chrU 8589139 8589379 -1459658 - Invader3_I LTR Gypsy -794 4094 3837 6 650 1121 62 0 18 chrU 8589868 8590033 -1459004 + Mariner2_DM DNA Tc1 751 912 0 6 650 1587 14 0 0 chrU 8590416 8590713 -1458324 + (TAA)n Simple_repeat Simple_repeat 1 297 0 6 650 1226 133 69 0 chrU 8590842 8591045 -1457992 - DNAREP1_DM LINE Penelope 0 594 378 6 650 1700 37 83 0 chrU 8591388 8591605 -1457432 - PROTOP DNA P -4245 235 1 6 650 21 89 0 0 chrU 8592310 8592366 -1456671 + AT_rich Low_complexity Low_complexity 1 56 0 6 650 3186 11 5 0 chrU 8592408 8592787 -1456250 - DOC LINE Jockey -6 4719 4339 6 650 4436 189 19 30 chrU 8592899 8594294 -1454743 + SAR_DM Satellite Satellite 1 1380 -203 6 650 3554 60 61 110 chrU 8594396 8595104 -1453933 - BATUMI_I LTR Pao -7209 754 82 6 650 1805 50 4 28 chrU 8595123 8595370 -1453667 - BATUMI_LTR LTR Pao 0 272 32 6 650 714 312 73 17 chrU 8595391 8595799 -1453238 + Copia2_I LTR Copia 1365 1795 -2367 6 650 2531 13 16 3 chrU 8595903 8596207 -1452830 + LSU-rRNA_Dme rRNA rRNA 1481 1788 -2112 6 650 4221 19 0 0 chrU 8596251 8596731 -1452306 + LSU-rRNA_Dme rRNA rRNA 1788 2267 -1633 6 650 2536 41 169 6 chrU 8596729 8597310 -1451727 + R2_DM LINE R2 805 1585 -2022 6 650 1103 89 0 6 chrU 8597417 8597597 -1451440 + (AATAG)n Simple_repeat Simple_repeat 2 180 0 6 650 1315 62 9 3 chrU 8597619 8597957 -1451080 + (AATAG)n Simple_repeat Simple_repeat 1 339 0 6 650 1491 80 3 8 chrU 8597985 8598706 -1450331 + (AATAG)n Simple_repeat Simple_repeat 1 717 0 6 650 198 118 0 0 chrU 8598715 8598749 -1450288 + (CAATA)n Simple_repeat Simple_repeat 2 35 0 6 650 213 132 0 0 chrU 8598777 8598815 -1450222 + (AATAG)n Simple_repeat Simple_repeat 2 39 0 6 650 1409 48 16 5 chrU 8598947 8599135 -1449902 - ACCORD2_I LTR Gypsy -5845 1367 1178 6 650 255 79 0 0 chrU 8599135 8599173 -1449864 + (TTA)n Simple_repeat Simple_repeat 2 39 0 6 650 5776 83 35 72 chrU 8599174 8600159 -1448878 - ACCORD2_I LTR Gypsy -6264 948 1 6 650 1361 6 0 25 chrU 8600159 8600320 -1448717 - ACCORD2_LTR LTR Gypsy 0 215 59 6 650 509 0 0 0 chrU 8600420 8600477 -1448560 - BLOOD_I LTR Gypsy -6556 57 1 6 650 3648 5 0 0 chrU 8600477 8600876 -1448161 - BLOOD_LTR LTR Gypsy 0 399 1 6 650 203 85 49 33 chrU 8600912 8600973 -1448064 + (TATAA)n Simple_repeat Simple_repeat 5 66 0 6 650 244 318 40 40 chrU 8601511 8601688 -1447349 - Gypsy6_I LTR Gypsy -2298 4714 4538 6 650 9243 10 8 0 chrU 8602271 8603326 -1445711 + DMRT1B LINE R1 127 1189 -3994 6 650 8915 26 54 2 chrU 8603428 8604830 -1444207 + R1_DM LINE R1 1772 3286 -2070 6 650 1289 178 167 21 chrU 8604935 8605313 -1443724 - Gypsy12_LTR LTR Gypsy -746 1590 1158 6 650 488 258 30 84 chrU 8605325 8605587 -1443450 - Gypsy12_LTR LTR Gypsy -1258 1078 831 6 650 2165 191 37 61 chrU 8605701 8606242 -1442795 - Gypsy12_LTR LTR Gypsy -1808 528 1 6 650 835 52 0 72 chrU 8606432 8606557 -1442480 - Gypsy6A_LTR LTR Gypsy -283 137 22 6 650 336 96 0 18 chrU 8606564 8606631 -1442406 + MDG1_I LTR Gypsy 6543 6596 0 6 650 1554 21 0 0 chrU 8606651 8606891 -1442146 + (TAA)n Simple_repeat Simple_repeat 1 240 0 6 650 864 149 128 41 chrU 8606899 8607095 -1441942 + MDG1_LTR LTR Gypsy 77 289 -153 6 650 27 0 0 0 chrU 8607199 8607226 -1441811 + AT_rich Low_complexity Low_complexity 1 27 0 6 650 328 26 0 0 chrU 8607410 8607449 -1441588 + ROOA_LTR LTR Pao 348 386 0 6 650 1891 57 327 0 chrU 8607481 8607829 -1441208 + ROOA_I LTR Pao 2791 3252 -3597 6 650 761 161 0 7 chrU 8607933 8608071 -1440966 + IDEFIX_I LTR Gypsy 4586 4722 -906 6 650 1081 143 66 40 chrU 8608122 8608348 -1440689 + IDEFIX_LTR LTR Gypsy 1 232 -362 6 650 4251 149 139 3 chrU 8608342 8609236 -1439801 + IDEFIX_I LTR Gypsy 3139 4153 -1475 6 650 461 110 12 12 chrU 8609242 8609325 -1439712 + IDEFIX_I LTR Gypsy 4102 4184 -1444 6 650 1620 4 0 0 chrU 8609428 8609694 -1439343 + (TTCTC)n Simple_repeat Simple_repeat 1 266 0 6 650 1418 161 162 26 chrU 8609699 8610122 -1438915 + TART LINE telomeric 9205 9582 -4895 6 650 1017 214 188 34 chrU 8610101 8610516 -1438521 + TART LINE telomeric 9685 10163 -300 6 650 26 0 0 0 chrU 8610563 8610589 -1438448 + AT_rich Low_complexity Low_complexity 1 26 0 6 650 837 49 24 8 chrU 8610922 8611046 -1437991 - Invader2_I LTR Gypsy -4466 126 1 6 650 2132 42 8 4 chrU 8611046 8611311 -1437726 - Invader2_LTR LTR Gypsy 0 266 1 6 650 667 177 124 22 chrU 8611311 8611570 -1437467 - ROVER-I_DM LTR Gypsy -350 6234 5903 6 650 2305 175 28 2 chrU 8611541 8612006 -1437031 - ROVER-I_DM LTR Gypsy -1328 5256 4780 6 650 1570 193 39 0 chrU 8612007 8612312 -1436725 - ROVER-I_DM LTR Gypsy -2081 4503 4187 6 650 5261 92 69 34 chrU 8612416 8613270 -1435767 - Gypsy12_I LTR Gypsy -4204 1342 459 6 650 2282 72 17 32 chrU 8613283 8613628 -1435409 - Gypsy12_I LTR Gypsy -5206 340 1 6 650 322 143 0 35 chrU 8613628 8613686 -1435351 - Gypsy12_LTR LTR Gypsy 0 2336 2281 6 650 285 198 34 34 chrU 8613708 8613797 -1435240 - Gypsy12_LTR LTR Gypsy -553 1727 1639 6 650 3772 37 2 45 chrU 8613909 8614421 -1434616 + IDEFIX_LTR LTR Gypsy 105 594 0 6 650 25 0 0 0 chrU 8614611 8614636 -1434401 + AT_rich Low_complexity Low_complexity 1 25 0 6 650 2146 37 4 4 chrU 8614996 8615265 -1433772 + IDEFIX_I LTR Gypsy 1 269 -5359 6 650 251 29 0 28 chrU 8615263 8615299 -1433738 + IDEFIX_I LTR Gypsy 1903 1937 -3691 6 650 1464 192 69 14 chrU 8615408 8616621 -1432416 - SAR_DM Satellite Satellite -437 1279 1 6 650 538 192 50 25 chrU 8616632 8616792 -1432245 - SAR_DM Satellite Satellite -683 789 626 6 650 5128 7 0 0 chrU 8616892 8617465 -1431572 + QUASIMODO_LTR LTR Gypsy 86 658 0 6 650 5704 63 49 11 chrU 8617467 8618283 -1430754 + ZAM_I LTR Gypsy 798 1644 -5846 6 650 6078 3 0 1 chrU 8618383 8619065 -1429972 - FW_DM LINE Jockey -4011 681 1 6 650 6290 7 0 1 chrU 8619071 8619774 -1429263 + Invader1_I LTR Gypsy 2185 2886 -300 6 650 623 62 10 30 chrU 8619874 8619974 -1429063 - CIRCE LINE Composite -1278 5078 4981 6 650 431 20 0 0 chrU 8620332 8620382 -1428655 - CIRCE LINE Composite -1376 4980 4931 6 650 7426 28 10 0 chrU 8620382 8621265 -1427772 + R1_DM LINE R1 2277 3168 -2188 6 650 2734 89 12 34 chrU 8621367 8622756 -1426281 + DMSAT6 Satellite Satellite 1 1358 -3 6 650 2710 81 0 106 chrU 8622863 8623305 -1425732 - CIRCE LINE Composite -1899 4457 4063 6 650 1189 99 84 58 chrU 8623305 8623530 -1425507 - CIRCE LINE Composite -2517 3839 3609 6 650 4104 25 67 2 chrU 8623731 8624242 -1424795 + PROTOP_A DNA P 1 544 -561 6 650 276 203 16 0 chrU 8624345 8624409 -1424628 + XDMR Unknown Unknown 297 361 0 6 650 4112 212 17 26 chrU 8624354 8625727 -1423310 - SAR_DM Satellite Satellite -353 1360 1 6 650 23 101 0 0 chrU 8626204 8626283 -1422754 + AT_rich Low_complexity Low_complexity 1 79 0 6 650 377 333 57 29 chrU 8626302 8626722 -1422315 + BURDOCK_I LTR Gypsy 2256 2687 -3173 6 650 38 39 0 0 chrU 8626744 8626796 -1422241 + AT_rich Low_complexity Low_complexity 1 52 0 6 650 201 164 44 15 chrU 8627446 8627514 -1421523 + CT-rich Low_complexity Low_complexity 1 70 0 6 650 254 291 8 33 chrU 8627856 8627977 -1421060 - MICROPIA_I LTR Gypsy -582 3894 3777 6 650 267 278 10 10 chrU 8628163 8628261 -1420776 - Invader1_I LTR Gypsy -1624 1562 1465 6 650 1042 274 7 9 chrU 8628306 8628672 -1420365 - MICROPIA_I LTR Gypsy -1507 2592 2230 6 650 3297 16 57 0 chrU 8628797 8629220 -1419817 - Invader2_I LTR Gypsy -2823 1769 1323 6 650 7805 23 16 1 chrU 8629216 8630168 -1418869 - Invader2_I LTR Gypsy -3625 967 2 6 650 5878 95 16 2 chrU 8630284 8631104 -1417933 + Gypsy12_I LTR Gypsy 2887 3717 -1829 6 650 3823 115 0 0 chrU 8631125 8631664 -1417373 + Gypsy12_I LTR Gypsy 3830 4368 -1178 6 650 3355 128 49 14 chrU 8631764 8632403 -1416634 - HETA LINE telomeric -572 5509 4865 6 650 3952 111 12 3 chrU 8632450 8633031 -1416006 - HETA LINE telomeric -3184 2897 2312 6 650 208 128 0 49 chrU 8633031 8633072 -1415965 + (CTAAA)n Simple_repeat Simple_repeat 5 43 0 6 650 412 164 0 0 chrU 8633079 8633146 -1415891 - HETA LINE telomeric -4605 1476 1410 6 650 5296 19 10 51 chrU 8633246 8633966 -1415071 - FB4_DM DNA Tc1 -10 4079 3390 6 650 699 0 0 0 chrU 8633982 8634062 -1414975 + NOF_FB DNA MuDR? 587 666 -3681 6 650 1346 20 0 0 chrU 8634060 8634213 -1414824 + NOF_FB DNA MuDR? 4195 4347 0 6 650 2962 20 0 82 chrU 8634213 8634628 -1414409 + FB4_DM DNA Tc1 3448 3826 -263 6 650 9938 64 12 2 chrU 8634728 8636090 -1412947 + IDEFIX_I LTR Gypsy 2907 4282 -1346 6 650 4339 202 27 32 chrU 8636209 8637580 -1411457 - SAR_DM Satellite Satellite -854 1363 1 6 650 3859 193 14 21 chrU 8637690 8638674 -1410363 + SAR_DM Satellite Satellite 1 1035 -543 6 650 336 202 13 0 chrU 8638674 8638753 -1410284 - XDMR Unknown Unknown 0 361 282 6 650 3859 193 14 21 chrU 8638753 8639070 -1409967 + SAR_DM Satellite Satellite 1036 1370 -208 6 650 11453 14 20 0 chrU 8639170 8640550 -1408487 + QUASIMODO_I LTR Gypsy 779 2186 -3874 6 650 5029 28 5 12 chrU 8640650 8641297 -1407740 + PROTOP DNA P 3892 4480 0 6 650 1257 14 0 0 chrU 8641297 8641439 -1407598 + Invader1_I LTR Gypsy 1173 1314 -1872 6 650 1553 297 17 15 chrU 8641430 8642015 -1407022 + Invader6_I LTR Gypsy 1300 1885 -2214 6 650 6986 37 47 0 chrU 8642129 8642988 -1406049 - DIVER_I LTR Pao -1814 3829 2931 6 650 4588 15 4 0 chrU 8642987 8643508 -1405529 - DIVER_I LTR Pao -2469 3174 2652 6 650 1873 26 8 45 chrU 8643608 8643850 -1405187 - Gypsy4_LTR LTR Gypsy -54 233 1 6 650 321 115 19 37 chrU 8644095 8644149 -1404888 - Gypsy5_I LTR Gypsy -6456 53 1 6 650 24 32 0 0 chrU 8644226 8644257 -1404780 + AT_rich Low_complexity Low_complexity 1 31 0 6 650 1719 169 19 92 chrU 8644404 8644827 -1404210 - Gypsy3_LTR LTR Gypsy -6 392 1 6 650 1092 132 0 0 chrU 8644827 8644986 -1404051 - Gypsy3_I LTR Gypsy 0 6177 6019 6 650 6363 3 0 0 chrU 8645086 8645796 -1403241 - FW_DM LINE Jockey -3982 710 1 6 650 4521 97 48 0 chrU 8645795 8646458 -1402579 + Invader1_I LTR Gypsy 2037 2731 -455 6 650 2142 16 4 0 chrU 8646599 8646853 -1402184 - IDEFIX_LTR LTR Gypsy 0 594 340 6 650 2623 23 3 0 chrU 8646854 8647156 -1401881 - ROO_LTR LTR Pao -125 303 1 6 650 5536 48 58 0 chrU 8647156 8647861 -1401176 + DMCR1A LINE CR1 304 1049 -3421 6 650 473 99 24 12 chrU 8647856 8647938 -1401099 + DMCR1A LINE CR1 582 664 -3806 6 650 3855 39 7 40 chrU 8648040 8648678 -1400359 + Gypsy12_I LTR Gypsy 104 775 -4771 6 650 6312 28 1 8 chrU 8648668 8649417 -1399620 + Gypsy12_I LTR Gypsy 1278 2021 -3525 6 81 1081 190 55 6 chrU 8649517 8650894 -1398143 - SAR_DM Satellite Satellite -690 1444 1 6 651 47 0 0 0 chrU 8651523 8651570 -1397467 + AT_rich Low_complexity Low_complexity 1 47 0 6 651 731 108 8 0 chrU 8652471 8652591 -1396446 - ARS406_DM Unknown Unknown -232 121 1 6 651 4254 200 17 25 chrU 8652486 8653844 -1395193 + SAR_DM Satellite Satellite 1 1347 -217 6 651 1811 118 25 4 chrU 8653980 8654261 -1394776 + MAX_LTR LTR Pao 1 287 -34 6 651 30 83 0 0 chrU 8655060 8655132 -1393905 + AT_rich Low_complexity Low_complexity 1 72 0 6 651 1592 30 20 10 chrU 8655423 8655625 -1393412 - DIVER2_LTR LTR Pao -178 207 4 6 651 1519 117 12 25 chrU 8655625 8655864 -1393173 - Gypsy12_LTR LTR Gypsy -2100 236 1 6 651 493 324 120 48 chrU 8655902 8656771 -1392266 - DIVER2_I LTR Pao -788 3359 2429 6 651 2476 134 17 13 chrU 8658374 8659749 -1389288 + DMSAT6 Satellite Satellite 1 1381 -3 6 651 3316 3 0 0 chrU 8659849 8660214 -1388823 - DOC LINE Jockey -674 4051 3687 6 651 2738 224 5 5 chrU 8660214 8660830 -1388207 - ROVER-I_DM LTR Gypsy -3980 2604 1989 6 651 1645 226 8 3 chrU 8660845 8661222 -1387815 - ROVER-I_DM LTR Gypsy -4032 2552 2174 6 651 5697 16 54 3 chrU 8661323 8662411 -1386626 + ROO_I LTR Pao 1476 2619 -5637 6 651 2415 21 0 0 chrU 8662410 8662697 -1386340 + ROO_I LTR Pao 2958 3244 -5012 6 651 1050 326 53 55 chrU 8663098 8663736 -1385301 - Gypsy4_I LTR Gypsy -2815 3473 2677 6 651 1508 28 24 0 chrU 8663736 8663949 -1385088 - TLD2 Unknown Unknown 0 218 1 6 651 1050 326 53 55 chrU 8663949 8664144 -1384893 - Gypsy4_I LTR Gypsy -2815 2676 2431 6 651 24 0 0 0 chrU 8664969 8664993 -1384044 + AT_rich Low_complexity Low_complexity 1 24 0 6 651 4976 27 2 2 chrU 8665741 8666334 -1382703 + G2_DM LINE Jockey 2506 3098 -4 6 651 6100 19 31 0 chrU 8666359 8667110 -1381927 - STALKER4_I LTR Gypsy -2875 3655 2882 6 651 2421 18 42 0 chrU 8667964 8668250 -1380787 - Invader3_LTR LTR Gypsy 0 298 1 6 651 2789 0 18 0 chrU 8668250 8668578 -1380459 - Invader3_I LTR Gypsy 0 4888 4555 6 651 4177 200 20 13 chrU 8668696 8670042 -1378995 - SAR_DM Satellite Satellite -397 1356 1 6 651 2243 4 4 0 chrU 8670146 8670415 -1378622 + ROO_I LTR Pao 7987 8256 0 6 651 3901 0 0 2 chrU 8670415 8670844 -1378193 + ROO_LTR LTR Pao 1 428 0 6 651 550 200 0 9 chrU 8670844 8670960 -1378077 - TV1I LTR Gypsy -1985 3978 3864 6 651 874 308 40 40 chrU 8670959 8671513 -1377524 - QUASIMODO_I LTR Gypsy -5069 991 438 6 651 5999 12 0 0 chrU 8671613 8672293 -1376744 - FW_DM LINE Jockey -4012 680 1 6 651 34 72 0 0 chrU 8672308 8672377 -1376660 + AT_rich Low_complexity Low_complexity 1 69 0 6 651 23 22 0 61 chrU 8672802 8672851 -1376186 + AT_rich Low_complexity Low_complexity 1 46 0 6 651 1082 0 0 0 chrU 8673079 8673200 -1375837 + NOMAD_I LTR Gypsy 6452 6572 0 6 651 4739 0 0 0 chrU 8673200 8673718 -1375319 + NOMAD_LTR LTR Gypsy 1 518 0 6 651 948 18 0 0 chrU 8673718 8673825 -1375212 - DM1731_LTR LTR Copia -229 107 1 6 651 2176 14 77 11 chrU 8673825 8674110 -1374927 + TAHRE LINE telomeric 863 1166 -9297 6 651 2244 29 189 9 chrU 8674125 8674443 -1374594 + DOC2_DM LINE Jockey 7 381 -4412 6 651 4541 44 63 2 chrU 8674545 8675166 -1373871 - PROTOP DNA P -3748 732 74 6 651 1954 8 4 0 chrU 8676010 8676244 -1372793 + Invader4_I LTR Gypsy 2179 2413 0 6 651 3167 3 0 0 chrU 8676244 8676590 -1372447 + Invader4_LTR LTR Gypsy 1 346 0 6 651 572 103 119 21 chrU 8676592 8676784 -1372253 - MAX_I LTR Pao -7367 547 299 6 651 288 341 112 8 chrU 8677107 8677358 -1371679 - BLASTOPIA_I LTR Gypsy -1 4480 4204 6 651 6672 38 67 52 chrU 8677472 8678418 -1370619 - R1_DM LINE R1 -3571 1785 826 6 651 1081 84 19 0 chrU 8678416 8678571 -1370466 - R1_DM LINE R1 -5198 158 1 6 651 942 53 0 0 chrU 8678604 8678718 -1370319 - R1_DM LINE R1 0 5356 5243 6 651 995 17 0 0 chrU 8678715 8678833 -1370204 - R1_DM LINE R1 -290 5066 4949 6 651 1661 0 0 0 chrU 8678933 8679126 -1369911 - DOC LINE Jockey -107 4618 4426 6 651 3137 237 59 49 chrU 8679139 8680265 -1368772 + Gypsy12_LTR LTR Gypsy 238 1374 -962 6 651 26 30 0 0 chrU 8680765 8680798 -1368239 + AT_rich Low_complexity Low_complexity 1 33 0 6 651 23 68 0 0 chrU 8680844 8680888 -1368149 + AT_rich Low_complexity Low_complexity 1 44 0 6 651 21 89 0 0 chrU 8680926 8680982 -1368055 + AT_rich Low_complexity Low_complexity 1 56 0 6 651 4702 19 7 0 chrU 8681849 8682425 -1366612 + Invader2_I LTR Gypsy 3219 3798 -794 6 651 4735 85 121 19 chrU 8682429 8683205 -1365832 + TART LINE telomeric 7118 7972 -6505 6 651 4311 190 29 25 chrU 8683305 8684660 -1364377 - SAR_DM Satellite Satellite -369 1360 1 6 651 26 30 0 0 chrU 8684776 8684809 -1364228 + AT_rich Low_complexity Low_complexity 1 33 0 6 651 23 68 0 0 chrU 8684855 8684899 -1364138 + AT_rich Low_complexity Low_complexity 1 44 0 6 651 21 89 0 0 chrU 8684937 8684993 -1364044 + AT_rich Low_complexity Low_complexity 1 56 0 6 651 578 13 291 0 chrU 8686031 8686110 -1362927 + PROTOP_B DNA P 1 102 -1051 6 651 1119 49 0 0 chrU 8686215 8686359 -1362678 + ARS406_DM Unknown Unknown 46 189 -164 6 651 4511 194 25 28 chrU 8686256 8687564 -1361473 - SAR_DM Satellite Satellite -203 1304 1 6 651 5025 94 49 70 chrU 8687672 8688636 -1360401 + PROTOP_B DNA P 132 1074 -79 6 651 26 30 0 0 chrU 8688744 8688777 -1360260 + AT_rich Low_complexity Low_complexity 1 33 0 6 651 23 68 0 0 chrU 8688823 8688867 -1360170 + AT_rich Low_complexity Low_complexity 1 44 0 6 651 21 89 0 0 chrU 8688905 8688961 -1360076 + AT_rich Low_complexity Low_complexity 1 56 0 6 651 707 304 43 42 chrU 8689805 8690203 -1358834 + Gypsy4_I LTR Gypsy 2372 3216 -4306 6 651 1431 56 19 0 chrU 8690203 8690417 -1358620 + TLD2 Unknown Unknown 1 218 0 6 651 707 304 43 42 chrU 8690417 8690470 -1358567 + Gypsy4_I LTR Gypsy 3217 3332 -4190 6 651 2569 44 78 0 chrU 8690575 8691176 -1357861 + G2_DM LINE Jockey 2157 2804 -298 6 651 1905 36 241 0 chrU 8691175 8691449 -1357588 - LSU-rRNA_Dme rRNA rRNA -978 2922 2583 6 651 4047 35 10 0 chrU 8691441 8691927 -1357110 - R2_DM LINE R2 -1 3606 3116 6 651 765 157 75 0 chrU 8692028 8692162 -1356875 + Gypsy_I LTR Gypsy 3326 3469 -3038 6 651 305 289 132 7 chrU 8692164 8692300 -1356737 - BS LINE Jockey -1667 3459 3307 6 651 1553 94 141 0 chrU 8692393 8692627 -1356410 + Gypsy_I LTR Gypsy 2526 2792 -3715 6 651 4276 173 40 3 chrU 8692626 8693378 -1355659 + Gypsy_I LTR Gypsy 2895 3674 -2833 6 651 276 295 0 0 chrU 8693489 8693584 -1355453 + MDG3_I LTR Gypsy 3330 3424 -1562 6 651 10012 38 28 34 chrU 8694926 8696273 -1352764 - BATUMI_I LTR Pao -4891 3072 1734 6 651 306 105 0 50 chrU 8696459 8696519 -1352518 - Stalker2_I LTR Gypsy -7345 57 1 6 651 345 25 0 0 chrU 8696519 8696546 -1352491 - STALKER4_I LTR Gypsy -6503 27 1 6 651 3561 7 0 2 chrU 8696546 8696949 -1352088 - STALKER4_LTR LTR Gypsy 0 402 1 6 651 4225 182 4 4 chrU 8696949 8697720 -1351317 + ROVER-I_DM LTR Gypsy 4106 4876 -1708 6 651 6015 1 0 0 chrU 8697820 8698492 -1350545 + FW_DM LINE Jockey 4020 4691 -1 6 651 3836 108 24 1 chrU 8698490 8699162 -1349875 + IDEFIX_I LTR Gypsy 1343 2454 -3606 6 651 2289 4 0 7 chrU 8699266 8699545 -1349492 + DOC LINE Jockey 4446 4722 -3 6 651 9225 8 0 12 chrU 8699544 8700610 -1348427 - DOC LINE Jockey -558 4167 3115 6 651 1500 22 0 0 chrU 8700720 8700900 -1348137 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 6 651 7728 69 110 0 chrU 8700908 8702053 -1346984 - ROOA_I LTR Pao -177 6672 5402 6 651 1950 217 59 31 chrU 8702153 8702709 -1346328 - Gypsy12_LTR LTR Gypsy -262 2074 1503 6 651 5776 88 9 10 chrU 8702710 8703488 -1345549 - Gypsy12_I LTR Gypsy -567 4979 4203 6 651 1756 89 102 11 chrU 8703628 8703911 -1345126 + DNAREP1_DM LINE Penelope 286 594 0 6 651 24 0 0 0 chrU 8704167 8704191 -1344846 + AT_rich Low_complexity Low_complexity 1 24 0 6 651 21 0 0 0 chrU 8704843 8704864 -1344173 + AT_rich Low_complexity Low_complexity 1 21 0 6 651 4011 262 49 17 chrU 8705035 8706375 -1342662 + ROVER-I_DM LTR Gypsy 1138 2568 -4016 6 651 558 210 0 35 chrU 8706475 8706618 -1342419 + ROVER-I_DM LTR Gypsy 4830 4967 -1617 6 651 4860 206 32 5 chrU 8706596 8707804 -1341233 + ROVER-I_DM LTR Gypsy 4622 6377 -207 6 651 4140 197 22 19 chrU 8707915 8709246 -1339791 - SAR_DM Satellite Satellite -876 1336 1 6 651 2245 158 49 10 chrU 8709363 8709855 -1339182 + ROVER-I_DM LTR Gypsy 6074 6584 0 6 651 2008 113 39 28 chrU 8709855 8710218 -1338819 + ROVER-LTR_DM LTR Gypsy 1 367 0 6 651 2424 45 0 0 chrU 8710386 8710694 -1338343 + IDEFIX_I LTR Gypsy 956 1263 -4365 6 651 22 35 0 0 chrU 8711244 8711273 -1337764 + AT_rich Low_complexity Low_complexity 1 29 0 6 651 775 332 25 14 chrU 8711609 8712130 -1336907 + Gypsy_DS LTR Gypsy 2995 3335 -4187 6 651 7252 174 19 1 chrU 8712234 8713572 -1335465 - Gypsy5_I LTR Gypsy -42 6467 5106 6 651 10517 16 60 1 chrU 8713672 8715009 -1334028 - DOC2_DM LINE Jockey -1508 3285 1870 6 651 4378 2 0 0 chrU 8715109 8715601 -1333436 - QUASIMODO_LTR LTR Gypsy -165 493 2 6 651 555 1 134 1 chrU 8715601 8716327 -1332710 + (TA)n Simple_repeat Simple_repeat 1 822 0 6 651 5078 34 3 1 chrU 8716546 8717205 -1331832 - IDEFIX_I LTR Gypsy -232 5396 4737 6 651 5264 43 1 6 chrU 8717202 8717882 -1331155 - IDEFIX_I LTR Gypsy -1395 4233 3557 6 651 628 27 0 0 chrU 8717982 8718056 -1330981 + ARS406_DM Unknown Unknown 116 189 -164 6 651 3917 192 43 21 chrU 8717993 8719314 -1329723 - SAR_DM Satellite Satellite -242 1349 1 6 651 5450 11 8 3 chrU 8719418 8720051 -1328986 + Invader1_I LTR Gypsy 2551 3186 0 6 651 3795 2 5 0 chrU 8720051 8720472 -1328565 + Invader1_LTR LTR Gypsy 1 423 0 6 651 1529 26 5 5 chrU 8720853 8721046 -1327991 - DM297_I LTR Gypsy -5974 193 1 6 651 3523 5 7 7 chrU 8721046 8721460 -1327577 - DM297_LTR LTR Gypsy 0 414 1 6 651 387 114 14 28 chrU 8721468 8721531 -1327506 - DMTOM1_LTR LTR Gypsy 0 410 349 6 651 608 148 40 16 chrU 8721531 8721655 -1327382 - DMTOM1_LTR LTR Gypsy 0 410 284 6 651 255 215 11 151 chrU 8721782 8721875 -1327162 - DM176_LTR LTR Gypsy -238 269 190 6 651 850 126 0 59 chrU 8721931 8722083 -1326954 - DM176_I LTR Gypsy 0 6420 6278 6 651 620 123 0 0 chrU 8722082 8722188 -1326849 - DM297_I LTR Gypsy -486 5681 5576 6 651 1479 34 0 0 chrU 8722288 8722494 -1326543 + (CAATA)n Simple_repeat Simple_repeat 1 206 0 6 651 1401 59 0 4 chrU 8722495 8722733 -1326304 + (TATAA)n Simple_repeat Simple_repeat 1 237 0 6 651 216 234 12 38 chrU 8723401 8723481 -1325556 + A-rich Low_complexity Low_complexity 1 78 0 6 651 1024 151 49 22 chrU 8723728 8723952 -1325085 - DM412 LTR Gypsy -5045 1852 1623 6 651 5766 107 92 8 chrU 8723949 8724973 -1324064 - DM412 LTR Gypsy -5388 1509 400 6 651 476 105 0 0 chrU 8724980 8725056 -1323981 + IDEFIX_I LTR Gypsy 3004 3079 -2549 6 651 1336 165 35 121 chrU 8725156 8725610 -1323427 - TAHRE LINE telomeric -9938 525 111 6 651 2184 218 73 88 chrU 8725653 8725788 -1323249 - TART LINE telomeric -3814 10663 10559 6 651 244 0 0 53 chrU 8725788 8725826 -1323211 + (TTA)n Simple_repeat Simple_repeat 2 37 0 6 651 2184 208 123 44 chrU 8725826 8726460 -1322577 - TART LINE telomeric -3919 10558 9909 6 651 9387 110 18 1 chrU 8726589 8727922 -1321115 + HMSBEAGLE_I LTR Gypsy 4005 5359 -1170 6 651 5219 82 19 11 chrU 8728022 8729262 -1319775 - TART LINE telomeric -5303 9174 8327 6 651 743 11 0 11 chrU 8729264 8729355 -1319682 + NINJA_I LTR Pao 5579 5668 -343 6 651 426 198 0 29 chrU 8729455 8729559 -1319478 - TAHRE LINE telomeric -508 9955 9855 6 651 1092 150 37 51 chrU 8729561 8729856 -1319181 - TAHRE LINE telomeric -10138 325 35 6 651 406 123 0 0 chrU 8729842 8729907 -1319130 - TAHRE LINE telomeric -1 10462 10398 6 651 1029 223 78 29 chrU 8729906 8730252 -1318785 - HETA LINE telomeric -1887 4194 3832 6 651 1980 191 133 18 chrU 8730285 8730787 -1318250 - HETA LINE telomeric -2479 3602 3043 6 651 1614 5 42 0 chrU 8731512 8731702 -1317335 - Copia2_LTR_DM LTR Copia 0 198 1 6 651 4532 8 0 2 chrU 8731702 8732217 -1316820 - Copia2_I LTR Copia 0 4162 3649 6 651 22 56 0 0 chrU 8732379 8732415 -1316622 + AT_rich Low_complexity Low_complexity 1 36 0 6 651 1992 184 14 39 chrU 8732595 8733105 -1315932 + HETA LINE telomeric 4020 4893 -1188 6 651 22 56 0 0 chrU 8733256 8733292 -1315745 + AT_rich Low_complexity Low_complexity 1 36 0 6 651 407 181 75 19 chrU 8733337 8733444 -1315593 + Copia_I LTR Copia 4401 4513 -80 6 651 7576 87 41 5 chrU 8733749 8735077 -1313960 + IDEFIX_I LTR Gypsy 3334 4708 -920 6 651 340 18 69 52 chrU 8735177 8735235 -1313802 + NTS_DM Other Other 182 240 0 6 651 1756 38 17 17 chrU 8735235 8735475 -1313562 + NTS_DM Other Other 1 240 0 6 651 1753 30 17 21 chrU 8735475 8735716 -1313321 + NTS_DM Other Other 1 240 0 6 651 1820 21 17 17 chrU 8735716 8735956 -1313081 + NTS_DM Other Other 1 240 0 6 651 1922 4 17 13 chrU 8735956 8736195 -1312842 + NTS_DM Other Other 1 240 0 6 651 1355 6 0 18 chrU 8736195 8736360 -1312677 + NTS_DM Other Other 1 162 -78 6 651 247 83 0 0 chrU 8736470 8736506 -1312531 + NTS_DM Other Other 4 39 -201 6 651 3569 27 50 0 chrU 8736606 8737048 -1311989 - FW_DM LINE Jockey -91 4601 4138 6 651 1701 15 29 0 chrU 8737052 8737258 -1311779 - FW_DM LINE Jockey -859 3833 3622 6 651 5959 17 1 1 chrU 8737242 8737934 -1311103 + R1_DM LINE R1 3475 4166 -1190 6 651 5466 93 15 13 chrU 8738034 8738814 -1310223 - Gypsy12_I LTR Gypsy -3838 1708 927 6 651 4191 85 4 2 chrU 8738807 8739361 -1309676 + Gypsy12_I LTR Gypsy 2791 3345 -2201 6 651 25 31 0 0 chrU 8739479 8739511 -1309526 + AT_rich Low_complexity Low_complexity 1 32 0 6 651 298 353 0 0 chrU 8739928 8740061 -1308976 + HMSBEAGLE_I LTR Gypsy 1869 2001 -4528 6 651 4145 201 17 28 chrU 8740891 8742208 -1306829 - SAR_DM Satellite Satellite -300 1303 1 6 651 444 101 0 0 chrU 8742146 8742215 -1306822 + ARS406_DM Unknown Unknown 1 69 -284 6 651 1033 65 0 0 chrU 8742315 8742454 -1306583 + ARS406_DM Unknown Unknown 51 189 -164 6 651 4188 201 14 21 chrU 8742351 8743640 -1305397 - SAR_DM Satellite Satellite -203 1279 1 6 651 2955 9 0 0 chrU 8743741 8744078 -1304959 - Copia2_I LTR Copia -3825 337 1 6 651 1710 10 0 0 chrU 8744078 8744275 -1304762 - Copia2_LTR_DM LTR Copia 0 198 2 6 651 1467 24 0 0 chrU 8744275 8744480 -1304557 + (TTA)n Simple_repeat Simple_repeat 1 205 0 6 651 1560 135 39 36 chrU 8744501 8744728 -1304309 + Jockey2 LINE Jockey 3089 3318 -110 6 651 1068 30 0 0 chrU 8744728 8744860 -1304177 + (TTA)n Simple_repeat Simple_repeat 3 134 0 6 651 1560 135 39 36 chrU 8744860 8744963 -1304074 + Jockey2 LINE Jockey 3319 3420 -8 6 651 226 120 573 0 chrU 8744992 8745067 -1303970 - DNAREP1_DM LINE Penelope -175 419 302 6 651 3376 207 33 30 chrU 8745363 8746490 -1302547 - SAR_DM Satellite Satellite -311 1130 1 6 651 4057 203 16 22 chrU 8746590 8747911 -1301126 + SAR_DM Satellite Satellite 1 1312 -203 6 651 3347 165 16 13 chrU 8748023 8748656 -1300381 + TAHRE LINE telomeric 9817 10451 -12 6 651 3776 63 50 16 chrU 8748655 8749216 -1299821 + TART LINE telomeric 630 1209 -13268 6 651 933 34 101 0 chrU 8749216 8749335 -1299702 + PROTOP_B DNA P 1 131 -1022 6 651 6150 6 30 0 chrU 8749435 8750164 -1298873 + DM176_I LTR Gypsy 5211 5961 -459 6 651 2290 0 31 0 chrU 8750164 8750422 -1298615 + Invader2_LTR LTR Gypsy 1 266 0 6 651 2754 6 3 0 chrU 8750422 8750757 -1298280 + Invader2_I LTR Gypsy 1 336 -4256 6 651 4025 193 22 45 chrU 8750860 8752175 -1296862 + SAR_DM Satellite Satellite 1 1285 -203 6 651 1628 125 27 17 chrU 8752275 8752567 -1296470 + TART LINE telomeric 7508 7726 -6751 6 651 756 82 36 0 chrU 8752566 8752676 -1296361 + TART LINE telomeric 10224 10337 -4140 6 651 2663 171 46 130 chrU 8752669 8753591 -1295446 + TART LINE telomeric 8062 8905 -5572 6 651 3378 23 5 0 chrU 8753694 8754089 -1294948 + LSU-rRNA_Dme rRNA rRNA 3504 3900 0 6 651 225 195 0 0 chrU 8754101 8754142 -1294895 + LSU-rRNA_Dme rRNA rRNA 2580 2620 -1280 6 651 485 245 52 71 chrU 8754200 8754354 -1294683 + G_DM LINE Jockey 1116 1266 -3080 6 651 4336 77 18 11 chrU 8754336 8754954 -1294083 + G2_DM LINE Jockey 101 722 -2380 6 651 350 94 0 0 chrU 8754955 8755008 -1294029 + G_DM LINE Jockey 3 55 -4291 6 651 2915 186 11 22 chrU 8755109 8755802 -1293235 - SAR_DM Satellite Satellite -359 1113 428 6 651 5481 3 0 0 chrU 8755803 8756423 -1292614 + DOC LINE Jockey 717 1336 -3389 6 651 279 173 60 173 chrU 8756523 8756656 -1292381 - DMLTR5 LTR Gypsy -109 157 40 6 651 5460 3 0 38 chrU 8756772 8757434 -1291603 + LSU-rRNA_Dme rRNA rRNA 1 637 -3263 6 651 3530 24 7 7 chrU 8757407 8757833 -1291204 + SSU-rRNA_Dme rRNA rRNA 1570 1995 0 6 651 3621 62 4 4 chrU 8757938 8758404 -1290633 - R1_DM LINE R1 -4890 466 1 6 651 2625 38 9 3 chrU 8758437 8758758 -1290279 - R1_DM LINE R1 0 5356 5034 6 651 2722 22 103 0 chrU 8758748 8759253 -1289784 - R1_DM LINE R1 -665 4691 4135 6 651 1059 219 4 0 chrU 8759917 8760159 -1288878 + ROVER-I_DM LTR Gypsy 3264 3506 -3078 6 651 400 17 15 77 chrU 8760160 8760225 -1288812 - STALKER4_I LTR Gypsy -6453 77 17 6 651 1547 52 38 5 chrU 8760369 8760580 -1288457 + ROVER-LTR_DM LTR Gypsy 1 218 -149 6 651 277 221 15 0 chrU 8760586 8760654 -1288383 + ROVER-I_DM LTR Gypsy 12 80 -6504 6 651 945 262 15 12 chrU 8760768 8761092 -1287945 - XDMR_DM Unknown Unknown -30 330 6 6 651 4463 202 23 31 chrU 8760825 8762048 -1286989 + SAR_DM Satellite Satellite 57 1269 -203 6 651 1020 52 0 0 chrU 8761945 8762080 -1286957 - ARS406_DM Unknown Unknown -164 189 55 6 651 5996 92 59 20 chrU 8762180 8763202 -1285835 - PROTOP_A DNA P -43 1062 1 6 651 21 57 0 0 chrU 8763779 8763814 -1285223 + AT_rich Low_complexity Low_complexity 1 35 0 6 651 1471 124 176 0 chrU 8764195 8764468 -1284569 + MAX_LTR LTR Pao 1 321 0 6 651 2187 64 35 74 chrU 8764482 8764821 -1284216 + MAX_I LTR Pao 2 327 -7587 6 651 213 212 45 0 chrU 8764822 8764888 -1284149 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 6 651 5957 0 0 0 chrU 8765002 8765653 -1283384 - DOC LINE Jockey -4072 653 3 6 651 5245 30 12 5 chrU 8765620 8766260 -1282777 + R1_DM LINE R1 3684 4328 -1028 6 651 464 37 0 0 chrU 8766259 8766313 -1282724 + R1_DM LINE R1 4465 4518 -838 6 651 7348 55 17 22 chrU 8766413 8767614 -1281423 - NINJA_I LTR Pao -4858 1153 1 6 651 908 55 0 0 chrU 8767614 8767724 -1281313 - NINJA_LTR LTR Pao 0 317 208 6 651 11008 35 4 1 chrU 8767824 8769134 -1279903 - R1_DM LINE R1 -3004 2352 1039 6 651 2543 3 0 0 chrU 8769234 8769516 -1279521 - FW_DM LINE Jockey -3126 1566 1285 6 651 2531 232 3 2 chrU 8769515 8770132 -1278905 + QUASIMODO_I LTR Gypsy 1832 2449 -3611 6 651 2388 11 0 0 chrU 8770135 8770401 -1278636 + Invader2_LTR LTR Gypsy 1 266 0 6 651 1162 28 0 0 chrU 8770401 8770544 -1278493 + Invader2_I LTR Gypsy 1 143 -4449 6 651 842 0 10 0 chrU 8770644 8770740 -1278297 - DM1731_I LTR Copia -3879 97 1 6 651 2782 30 3 0 chrU 8770740 8771071 -1277966 - DM1731_LTR LTR Copia 0 336 5 6 651 1620 9 2 5 chrU 8771071 8771647 -1277390 + (TATAA)n Simple_repeat Simple_repeat 1 573 0 6 651 2414 43 3 10 chrU 8771647 8771954 -1277083 - DM1731_LTR LTR Copia -1 335 31 6 651 6194 17 0 0 chrU 8772054 8772757 -1276280 - STALKER4_I LTR Gypsy -1844 4686 3984 6 651 5212 7 0 0 chrU 8772771 8773363 -1275674 - STALKER4_I LTR Gypsy -2613 3917 3326 6 651 792 37 0 115 chrU 8773596 8773718 -1275319 - Baggins1 LINE LOA 0 5453 5346 6 651 27 29 0 0 chrU 8774041 8774075 -1274962 + AT_rich Low_complexity Low_complexity 1 34 0 6 651 3547 24 0 32 chrU 8774340 8774772 -1274265 - Baggins1 LINE LOA 0 5453 5036 6 651 9941 34 53 0 chrU 8774872 8776151 -1272886 - IDEFIX_I LTR Gypsy -4281 1347 1 6 651 3546 5 0 5 chrU 8776299 8776703 -1272334 + STALKER4_LTR LTR Gypsy 1 402 0 6 651 23 0 0 0 chrU 8776908 8776931 -1272106 + AT_rich Low_complexity Low_complexity 1 23 0 6 651 2188 279 47 16 chrU 8777857 8778660 -1270377 + G6_DM LINE Jockey 372 1199 -843 6 651 2811 18 30 0 chrU 8778665 8778996 -1270041 - DOC2_DM LINE Jockey -2816 1977 1637 6 651 7558 33 38 0 chrU 8779096 8780001 -1269036 - R1_DM LINE R1 -2024 3332 2394 6 651 3511 23 2 0 chrU 8780003 8780402 -1268635 - R1_DM LINE R1 -3291 2065 1666 6 651 10972 24 25 9 chrU 8780502 8781806 -1267231 + FW_DM LINE Jockey 1361 2685 -2007 6 652 23 68 0 0 chrU 8782150 8782194 -1266843 + AT_rich Low_complexity Low_complexity 1 44 0 6 652 292 218 0 25 chrU 8782517 8782597 -1266440 + Copia_I LTR Copia 1400 1477 -3116 6 652 1891 269 4 4 chrU 8782658 8783210 -1265827 + Copia_I LTR Copia 1664 2215 -2378 6 652 247 355 31 21 chrU 8783906 8784099 -1264938 + ACCORD2_I LTR Gypsy 561 755 -6457 6 652 456 103 0 143 chrU 8784411 8784502 -1264535 + MDG1_I LTR Gypsy 1 78 -6518 6 652 366 148 16 0 chrU 8784553 8784614 -1264423 + MDG1_I LTR Gypsy 72 133 -6463 6 652 242 91 0 0 chrU 8784714 8784747 -1264290 + ROVER-I_DM LTR Gypsy 3757 3789 -2795 6 652 3431 30 0 0 chrU 8784764 8785159 -1263878 + FW_DM LINE Jockey 9 403 -4289 6 652 1356 0 0 7 chrU 8785186 8785336 -1263701 - STALKER4_LTR LTR Gypsy 0 402 254 6 652 505 81 0 39 chrU 8785336 8785413 -1263624 + ROVER-LTR_DM LTR Gypsy 1 74 -293 6 652 1421 53 5 50 chrU 8785544 8785744 -1263293 + ROVER-LTR_DM LTR Gypsy 177 367 0 6 652 1090 16 0 8 chrU 8785744 8785868 -1263169 + ROVER-I_DM LTR Gypsy 1 123 -6461 6 652 820 20 0 10 chrU 8785919 8786018 -1263019 + ROVER-I_DM LTR Gypsy 103 200 -6384 6 652 1969 106 65 28 chrU 8786118 8786633 -1262404 - TAHRE LINE telomeric -12 10451 10186 6 652 4023 106 91 77 chrU 8786632 8787415 -1261622 - TART LINE telomeric -6719 7758 7003 6 652 5036 41 19 9 chrU 8787527 8788173 -1260864 - ROO_I LTR Pao -131 8125 7474 6 652 5751 18 1 0 chrU 8788166 8788826 -1260211 - ROO_I LTR Pao -1000 7256 6596 6 652 231 216 109 94 chrU 8788926 8789054 -1259983 + Invader1_LTR LTR Gypsy 239 368 -55 6 652 240 172 46 15 chrU 8789592 8789657 -1259380 - HMSBEAGLE_I LTR Gypsy -6308 221 155 6 652 266 128 0 21 chrU 8789885 8789933 -1259104 - HMSBEAGLE_I LTR Gypsy -6308 221 175 6 652 376 49 65 16 chrU 8789952 8790014 -1259023 - HMSBEAGLE_I LTR Gypsy -6464 65 1 6 652 1016 168 102 15 chrU 8790013 8790218 -1258819 - DMLTR5 LTR Gypsy 0 266 44 6 652 4068 6 40 0 chrU 8790329 8790798 -1258239 - IDEFIX_LTR LTR Gypsy -106 488 1 6 652 266 103 0 0 chrU 8790766 8790805 -1258232 + BARI1 DNA Tc1 3 41 -1709 6 652 38 39 0 0 chrU 8790851 8790903 -1258134 + AT_rich Low_complexity Low_complexity 1 52 0 6 652 402 332 60 31 chrU 8790930 8791346 -1257691 - BURDOCK_I LTR Gypsy -3178 2682 2255 6 652 451 220 105 35 chrU 8791409 8791563 -1257474 - TIRANT_I LTR Gypsy -3837 3855 3777 6 652 2507 115 90 35 chrU 8791732 8792244 -1256793 + STALKER4_I LTR Gypsy 696 1235 -5295 6 652 7010 15 6 0 chrU 8792242 8793034 -1256003 + STALKER4_I LTR Gypsy 1580 2376 -4154 6 652 2980 270 43 17 chrU 8793134 8794109 -1254928 - G6_DM LINE Jockey -757 1285 286 6 652 1000 70 0 0 chrU 8794307 8794435 -1254602 + G2_DM LINE Jockey 2680 2807 -295 6 652 186 71 0 0 chrU 8795749 8795777 -1253260 + (TTC)n Simple_repeat Simple_repeat 3 30 0 6 652 5442 42 3 24 chrU 8796179 8796856 -1252181 + Baggins1 LINE LOA 4791 5453 0 6 652 6601 109 79 42 chrU 8797337 8798505 -1250532 - Gypsy12_I LTR Gypsy -4309 1237 27 6 652 574 218 25 31 chrU 8798475 8798636 -1250401 - Gypsy12_LTR LTR Gypsy -1938 398 239 6 652 2796 3 0 6 chrU 8798736 8799062 -1249975 + DM176_I LTR Gypsy 6097 6420 0 6 652 4293 8 41 0 chrU 8799062 8799549 -1249488 + DM176_LTR LTR Gypsy 1 507 0 6 652 2272 30 15 0 chrU 8799549 8799809 -1249228 - STALKER4_LTR LTR Gypsy -138 264 1 6 652 10228 36 3 16 chrU 8800133 8801409 -1247628 - ROO_I LTR Pao -6171 2085 826 6 652 5375 51 28 19 chrU 8801602 8802604 -1246433 + PROTOP_A DNA P 1 1153 0 6 652 4482 206 24 26 chrU 8802927 8804223 -1244814 - SAR_DM Satellite Satellite -227 1293 1 6 652 4623 192 22 27 chrU 8804323 8805618 -1243419 - SAR_DM Satellite Satellite -261 1288 1 6 652 611 14 14 0 chrU 8805718 8805789 -1243248 + R1_DM LINE R1 5285 5356 0 6 652 2353 65 7 7 chrU 8805822 8806131 -1242906 + R1_DM LINE R1 1 309 -5047 6 652 7502 32 11 0 chrU 8806128 8807012 -1242025 + R1_DM LINE R1 1503 2396 -2960 6 652 2520 103 21 22 chrU 8807112 8808406 -1240631 + DMSAT6 Satellite Satellite 1 1292 -29 6 652 664 332 77 11 chrU 8808932 8809433 -1239604 - GTWIN_I LTR Gypsy -2883 3538 3045 6 652 406 302 30 36 chrU 8809471 8809792 -1239245 - TIRANT_I LTR Gypsy -3948 3744 3584 6 652 4340 72 2 4 chrU 8809900 8810506 -1238531 - BATUMI_I LTR Pao -1162 6752 5905 6 652 3171 63 19 15 chrU 8810506 8810938 -1238099 + STALKER4_LTR LTR Gypsy 1 399 -3 6 652 26 50 0 0 chrU 8811043 8811083 -1237954 + AT_rich Low_complexity Low_complexity 1 40 0 6 652 362 221 0 55 chrU 8811083 8811193 -1237844 + STALKER4_I LTR Gypsy 228 331 -6199 6 652 8020 22 16 3 chrU 8811293 8812239 -1236798 + DMRT1B LINE R1 1123 2080 -3103 6 652 2680 72 0 3 chrU 8812236 8812586 -1236451 + DMRT1B LINE R1 2229 2577 -2606 6 652 3758 218 28 13 chrU 8812690 8813977 -1235060 - SAR_DM Satellite Satellite -859 1306 1 6 652 21 0 0 0 chrU 8814077 8814098 -1234939 + AT_rich Low_complexity Low_complexity 1 21 0 6 652 1753 169 19 92 chrU 8814254 8814677 -1234360 - Gypsy3_LTR LTR Gypsy -6 392 1 6 652 1139 167 11 58 chrU 8814677 8814937 -1234100 - Gypsy5_LTR LTR Gypsy -182 248 1 6 652 3610 58 9 0 chrU 8814937 8815368 -1233669 + DIVER2_I LTR Pao 2798 3232 -915 6 652 9171 21 14 1 chrU 8815468 8816528 -1232509 - PROTOP_A DNA P -31 1074 1 6 652 5911 2 0 2 chrU 8816858 8817496 -1231541 + BS2 LINE Jockey 4085 4721 0 6 652 189 0 0 0 chrU 8817502 8817523 -1231514 + (A)n Simple_repeat Simple_repeat 1 21 0 6 652 5667 10 0 0 chrU 8817523 8818147 -1230890 - ACCORD_I LTR Gypsy -2780 3508 2885 6 652 1629 72 4 0 chrU 8818247 8818483 -1230554 + S_DM DNA Tc1 1500 1736 0 6 652 383 155 0 0 chrU 8818511 8818569 -1230468 + DNAREP1_DM LINE Penelope 431 488 -106 6 652 1113 142 204 13 chrU 8818601 8818939 -1230098 - DNAREP1_DM LINE Penelope -262 332 3 6 652 478 152 21 11 chrU 8818962 8819055 -1229982 + PROTOP_B DNA P 869 962 -191 6 652 271 145 12 106 chrU 8819234 8819319 -1229718 + Gypsy8_LTR LTR Gypsy 1 77 -227 6 652 5874 26 0 0 chrU 8819635 8820314 -1228723 + G2_DM LINE Jockey 2383 3061 -41 6 652 1547 214 148 9 chrU 8820445 8820912 -1228125 + Stalker2_I LTR Gypsy 277 808 -6594 6 652 11272 4 26 2 chrU 8821023 8822309 -1226728 - ROVER-I_DM LTR Gypsy -1554 5030 3713 6 652 11144 30 14 1 chrU 8822409 8823696 -1225341 + MAX_I LTR Pao 3443 4746 -3168 6 652 2685 86 17 23 chrU 8823796 8825061 -1223976 - DMSAT6 Satellite Satellite -29 1257 1 6 652 806 280 98 28 chrU 8825184 8825654 -1223383 + QUASIMODO_I LTR Gypsy 1227 1729 -4331 6 652 1689 245 15 11 chrU 8825974 8826448 -1222589 + QUASIMODO_I LTR Gypsy 1842 2317 -3743 6 652 507 33 0 0 chrU 8826567 8826627 -1222410 + ARS406_DM Unknown Unknown 127 186 -167 6 652 4352 207 21 28 chrU 8826580 8827851 -1221186 - SAR_DM Satellite Satellite -255 1262 1 6 652 2569 204 57 48 chrU 8827951 8828624 -1220413 + TAHRE LINE telomeric 7193 7871 -2592 6 652 1216 196 33 61 chrU 8828630 8829107 -1219930 + TAHRE LINE telomeric 6944 7243 -3220 6 652 548 183 0 102 chrU 8829107 8829235 -1219802 + TART LINE telomeric 8655 8769 -5708 6 652 2940 227 42 69 chrU 8829355 8830287 -1218750 - Gypsy12_LTR LTR Gypsy -1429 907 1 6 652 1751 96 0 16 chrU 8830364 8830618 -1218419 - Gypsy12_I LTR Gypsy -4577 969 720 6 652 4245 184 24 34 chrU 8830722 8831982 -1217055 + SAR_DM Satellite Satellite 1 1247 -213 6 652 543 209 21 7 chrU 8831861 8832001 -1217036 - XDMR_DM Unknown Unknown 0 360 219 6 652 5718 19 1 0 chrU 8832101 8832751 -1216286 - QUASIMODO_LTR LTR Gypsy -7 651 1 6 652 518 16 0 0 chrU 8833483 8833547 -1215490 - R1_DM LINE R1 -2899 2457 2394 6 652 6546 37 2 1 chrU 8833549 8834367 -1214670 - R1_DM LINE R1 -3291 2065 1247 6 652 2954 53 0 5 chrU 8834369 8834764 -1214273 - R1_DM LINE R1 -4745 611 219 6 652 510 89 38 0 chrU 8836248 8836327 -1212710 + NTS_DM Other Other 9 90 -150 6 652 226 0 59 0 chrU 8836644 8836678 -1212359 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 652 44 37 0 36 chrU 8836762 8836846 -1212191 + AT_rich Low_complexity Low_complexity 1 81 0 6 652 522 0 0 0 chrU 8836908 8836969 -1212068 + SSU-rRNA_Dme rRNA rRNA 26 86 -1909 6 652 978 304 24 24 chrU 8836971 8837503 -1211534 - BLOOD_I LTR Gypsy -4167 2446 1915 6 652 2012 83 3 13 chrU 8837662 8837966 -1211071 - CIRCE LINE Composite -2542 3814 3514 6 652 1893 222 4 2 chrU 8837981 8838450 -1210587 + QUASIMODO_I LTR Gypsy 2702 3171 -2889 6 652 1255 269 2 11 chrU 8838452 8838904 -1210133 + QUASIMODO_I LTR Gypsy 3554 4001 -2059 6 652 1944 0 0 0 chrU 8839006 8839227 -1209810 - LSU-rRNA_Dme rRNA rRNA -1892 2008 1788 6 652 8601 2 3 3 chrU 8839271 8840283 -1208754 - LSU-rRNA_Dme rRNA rRNA -2112 1788 777 6 652 2421 170 0 0 chrU 8840383 8840819 -1208218 - HETA LINE telomeric -2758 3323 2888 6 652 1164 155 0 0 chrU 8840831 8841025 -1208012 - TAHRE LINE telomeric -8212 2251 2058 6 652 3356 165 20 2 chrU 8841026 8841662 -1207375 - HETA LINE telomeric -4002 2079 1432 6 652 21 89 0 0 chrU 8842244 8842300 -1206737 + AT_rich Low_complexity Low_complexity 1 56 0 6 652 3561 15 37 63 chrU 8842370 8842859 -1206178 - MICROPIA_LTR LTR Gypsy 0 476 1 6 652 1361 11 94 6 chrU 8842859 8843040 -1205997 - MICROPIA_I LTR Gypsy 0 4476 4280 6 652 1475 26 0 10 chrU 8843140 8843337 -1205700 - NTS_DM Other Other -45 195 1 6 652 1734 21 17 17 chrU 8843337 8843577 -1205460 - NTS_DM Other Other 0 240 1 6 652 1408 20 20 20 chrU 8843577 8843780 -1205257 - NTS_DM Other Other 0 240 38 6 652 767 10 0 10 chrU 8843780 8843877 -1205160 - NTS_DM Other Other -107 133 38 6 652 832 9 9 27 chrU 8843877 8843988 -1205049 - NTS_DM Other Other -107 133 25 6 652 21 57 0 0 chrU 8844014 8844049 -1204988 + AT_rich Low_complexity Low_complexity 1 35 0 6 652 1252 18 0 6 chrU 8844049 8844214 -1204823 - NTS_DM Other Other -39 201 38 6 652 870 9 0 27 chrU 8844214 8844326 -1204711 - NTS_DM Other Other -107 133 25 6 652 307 25 0 0 chrU 8844378 8844418 -1204619 - NTS_DM Other Other -39 201 162 6 652 10300 23 17 1 chrU 8844518 8845796 -1203241 - R1_DM LINE R1 -1205 4151 2853 6 652 500 61 185 57 chrU 8845896 8846053 -1202984 + BATUMI_I LTR Pao 536 712 -7251 6 652 3233 64 20 89 chrU 8846053 8846706 -1202331 + BATUMI_I LTR Pao 596 1203 -6760 6 652 3606 30 4 11 chrU 8846707 8847174 -1201863 + BATUMI_I LTR Pao 1973 2436 -5527 6 652 4228 30 0 2 chrU 8847275 8847844 -1201193 - IDEFIX_I LTR Gypsy -226 5402 4835 6 652 1509 16 0 0 chrU 8847841 8848034 -1201003 - IDEFIX_I LTR Gypsy -929 4699 4507 6 652 3805 58 0 0 chrU 8848033 8848551 -1200486 - IDEFIX_I LTR Gypsy -1632 3996 3479 6 652 1381 199 79 52 chrU 8848651 8849372 -1199665 - Gypsy12_LTR LTR Gypsy -363 1973 1181 6 652 697 273 21 43 chrU 8849437 8849785 -1199252 - Gypsy12_LTR LTR Gypsy -1564 772 502 6 652 274 232 0 0 chrU 8849797 8849853 -1199184 - Gypsy12_LTR LTR Gypsy -1816 464 409 6 652 2913 0 3 0 chrU 8850028 8850370 -1198667 - Copia_I LTR Copia -4250 343 1 6 652 2200 14 0 4 chrU 8850370 8850647 -1198390 - Copia_LTR LTR Copia 0 276 1 6 652 32 26 0 0 chrU 8850647 8850686 -1198351 + AT_rich Low_complexity Low_complexity 1 39 0 6 652 480 335 3 3 chrU 8850991 8851249 -1197788 + MICROPIA_I LTR Gypsy 273 533 -1880 6 652 3034 205 73 17 chrU 8851411 8852652 -1196385 - SAR_DM Satellite Satellite -682 1309 1 6 652 620 167 0 8 chrU 8852554 8852681 -1196356 + ARS406_DM Unknown Unknown 1 126 -227 6 652 5329 3 0 0 chrU 8852781 8853403 -1195634 - R2_DM LINE R2 -2520 1087 466 6 652 5727 8 0 1 chrU 8853388 8854056 -1194981 - LSU-rRNA_Dme rRNA rRNA -1340 2560 1894 6 652 1564 316 8 9 chrU 8854244 8854886 -1194151 + HMSBEAGLE_I LTR Gypsy 1440 2080 -4449 6 652 1958 17 0 0 chrU 8855199 8855431 -1193606 + PROTOP_A DNA P 1 232 -873 6 652 1261 0 6 6 chrU 8855531 8855690 -1193347 + ROO_I LTR Pao 8098 8256 0 6 652 3742 2 0 0 chrU 8855690 8856118 -1192919 + ROO_LTR LTR Pao 1 428 0 6 652 1967 78 31 15 chrU 8856118 8856431 -1192606 - QUASIMODO_I LTR Gypsy -1494 4566 4249 6 652 1027 152 18 28 chrU 8856588 8856805 -1192232 - GTWIN_LTR LTR Gypsy -93 402 188 6 652 1424 229 68 31 chrU 8858377 8859088 -1189949 - QUASIMODO_I LTR Gypsy -142 5918 5182 6 652 351 293 0 0 chrU 8859104 8859273 -1189764 - QUASIMODO_I LTR Gypsy -945 5115 4862 6 652 579 84 0 0 chrU 8859275 8859358 -1189679 + ROVER-I_DM LTR Gypsy 177 259 -6325 6 652 9656 19 44 6 chrU 8859653 8860927 -1188110 - Invader2_I LTR Gypsy -380 4212 2891 6 652 254 342 6 12 chrU 8861052 8861212 -1187825 - Invader3_I LTR Gypsy -1413 3475 3317 6 652 247 289 0 0 chrU 8861521 8861611 -1187426 - Invader2_I LTR Gypsy -1847 2745 2656 6 652 298 301 76 49 chrU 8861647 8862053 -1186984 - BLASTOPIA_I LTR Gypsy -1885 2596 2180 6 652 5887 6 0 14 chrU 8862399 8863104 -1185933 - DOC LINE Jockey -4000 725 31 6 652 3107 8 0 0 chrU 8863771 8864132 -1184905 + LSU-rRNA_Dme rRNA rRNA 3540 3900 0 6 652 246 150 0 0 chrU 8864237 8864277 -1184760 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 6 652 5533 24 11 18 chrU 8864327 8865042 -1183995 - G_DM LINE Jockey -15 4331 3622 6 652 26 0 0 0 chrU 8865297 8865323 -1183714 + AT_rich Low_complexity Low_complexity 1 26 0 6 652 227 244 106 43 chrU 8867345 8867439 -1181598 - TRANSPAC_I LTR Gypsy -333 4257 4158 6 652 402 349 7 3 chrU 8867477 8867759 -1181278 - HMSBEAGLE_I LTR Gypsy -1144 5385 5103 6 652 5577 91 49 69 chrU 8868069 8869155 -1179882 + PROTOP_B DNA P 1 1064 -89 6 652 3548 189 40 19 chrU 8869256 8870504 -1178533 + SAR_DM Satellite Satellite 1 1273 -208 6 652 568 214 7 14 chrU 8870647 8870789 -1178248 + HETRP_DM Satellite Satellite 1529 1669 -203 6 652 580 200 7 15 chrU 8870937 8871074 -1177963 + HETRP_DM Satellite Satellite 1529 1664 -208 6 652 625 200 7 14 chrU 8871242 8871384 -1177653 + HETRP_DM Satellite Satellite 1529 1669 -203 6 652 336 24 0 0 chrU 8871514 8871555 -1177482 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 652 476 209 8 17 chrU 8871555 8871672 -1177365 + HETRP_DM Satellite Satellite 1549 1664 -208 6 652 393 105 0 0 chrU 8871840 8871897 -1177140 + HETRP_DM Satellite Satellite 1529 1585 -287 6 652 3269 31 111 0 chrU 8871999 8872449 -1176588 + PROTOP DNA P 1 500 -3980 6 652 3974 52 85 1 chrU 8872448 8873267 -1175770 + PROTOP DNA P 111 865 -240 6 652 1977 12 0 8 chrU 8873368 8873623 -1175414 - NINJA_I LTR Pao -5758 253 1 6 652 2411 41 0 28 chrU 8873623 8873949 -1175088 - NINJA_LTR LTR Pao 0 317 1 6 652 405 20 0 0 chrU 8873949 8873998 -1175039 + QUASIMODO_I LTR Gypsy 6012 6060 0 6 652 568 0 0 72 chrU 8873998 8874081 -1174956 + QUASIMODO_LTR LTR Gypsy 1 77 -581 6 652 4630 13 0 4 chrU 8874089 8874638 -1174399 + DMRT1A LINE R1 1 547 -4636 6 652 1873 5 0 0 chrU 8874738 8874960 -1174077 - MDG1_I LTR Gypsy -6374 222 1 6 652 2930 17 0 3 chrU 8874960 8875317 -1173720 - MDG1_LTR LTR Gypsy 0 442 87 6 652 423 100 0 0 chrU 8875317 8875387 -1173650 + (TTA)n Simple_repeat Simple_repeat 3 72 0 6 652 5228 3 0 0 chrU 8875401 8876008 -1173029 + MDG1_I LTR Gypsy 4010 4616 -1980 6 652 344 45 0 0 chrU 8876704 8876748 -1172289 + PROTOP_B DNA P 1 44 -1109 6 652 4455 82 8 14 chrU 8876749 8877378 -1171659 + Gypsy12_I LTR Gypsy 4834 5458 -88 6 652 21 0 0 0 chrU 8877772 8877793 -1171244 + AT_rich Low_complexity Low_complexity 1 21 0 6 652 21 0 0 0 chrU 8877905 8877926 -1171111 + AT_rich Low_complexity Low_complexity 1 21 0 6 652 852 52 9 9 chrU 8877978 8878094 -1170943 - NINJA_LTR LTR Pao -1 316 201 6 652 1987 23 30 15 chrU 8878154 8878422 -1170615 + BATUMI_LTR LTR Pao 1 272 0 6 652 2532 25 25 3 chrU 8878422 8878747 -1170290 + BATUMI_I LTR Pao 1 332 -7631 6 652 2999 30 38 0 chrU 8878847 8879243 -1169794 + FW_DM LINE Jockey 4276 4686 -6 6 652 1792 60 0 0 chrU 8879244 8879478 -1169559 - R1_DM LINE R1 -3966 1390 1157 6 652 4093 65 44 0 chrU 8879485 8880057 -1168980 - R1_DM LINE R1 -4759 597 1 6 652 5391 6 14 1 chrU 8880222 8880872 -1168165 + QUASIMODO_LTR LTR Gypsy 1 658 0 6 652 24 0 0 0 chrU 8880872 8880896 -1168141 + AT_rich Low_complexity Low_complexity 1 24 0 6 652 3639 18 40 0 chrU 8881031 8881483 -1167554 + PROTOP_B DNA P 1 470 -683 6 652 3374 48 39 0 chrU 8882056 8882513 -1166524 + DOC3_DM LINE Jockey 1421 1895 -2845 6 652 2737 24 3 0 chrU 8882517 8882849 -1166188 + DOC3_DM LINE Jockey 2205 2537 -2203 6 652 1565 270 19 19 chrU 8882950 8883539 -1165498 + FROGGER_I LTR Copia 1403 1991 -86 6 652 1490 200 13 13 chrU 8883820 8884215 -1164822 - SAR_DM Satellite Satellite -478 994 600 6 652 5910 33 1 3 chrU 8884315 8885066 -1163971 - R1_DM LINE R1 -1446 3910 3161 6 652 4134 29 2 0 chrU 8885065 8885580 -1163457 - R1_DM LINE R1 -2334 3022 2507 6 652 4113 129 50 45 chrU 8885680 8886579 -1162458 - TART LINE telomeric -4202 10275 9372 6 652 1297 187 38 16 chrU 8886589 8886909 -1162128 - HETA LINE telomeric -1772 4309 3983 6 652 5741 6 18 0 chrU 8887044 8887720 -1161317 + DMRT1B LINE R1 4496 5183 0 6 652 1867 9 61 0 chrU 8887833 8888062 -1160975 + DMRT1A LINE R1 3194 3436 -1747 6 652 2074 0 0 4 chrU 8888062 8888307 -1160730 + Stalker2_LTR LTR Gypsy 1 244 -180 6 652 7777 48 6 9 chrU 8888639 8889670 -1159367 + IDEFIX_I LTR Gypsy 1 1028 -4600 6 652 587 99 10 0 chrU 8889771 8889872 -1159165 + (AATAG)n Simple_repeat Simple_repeat 4 105 0 6 652 1313 73 6 4 chrU 8889890 8890424 -1158613 + (AATAG)n Simple_repeat Simple_repeat 1 535 0 6 652 1407 93 4 13 chrU 8890437 8890972 -1158065 + (AATAG)n Simple_repeat Simple_repeat 1 530 0 6 652 4769 12 24 0 chrU 8891133 8891719 -1157318 - Invader2_I LTR Gypsy -3992 600 1 6 652 2309 23 0 0 chrU 8891719 8891985 -1157052 - Invader2_LTR LTR Gypsy 0 266 1 6 652 3092 37 0 0 chrU 8891985 8892394 -1156643 + IDEFIX_I LTR Gypsy 5027 5435 -193 6 652 2864 26 51 3 chrU 8892496 8892849 -1156188 - PROTOP DNA P -4110 370 1 6 652 5986 0 0 0 chrU 8893859 8894524 -1154513 + FW_DM LINE Jockey 4028 4692 0 6 652 5109 20 0 0 chrU 8894518 8895121 -1153916 - STALKER4_I LTR Gypsy -3603 2927 2325 6 652 2503 7 0 3 chrU 8895221 8895506 -1153531 - STALKER4_LTR LTR Gypsy -118 284 1 6 652 3192 10 7 14 chrU 8895506 8895925 -1153112 - STALKER4_I LTR Gypsy 0 6530 6115 6 652 4985 0 0 0 chrU 8895925 8896483 -1152554 - BARI_DM DNA Tc1 0 1728 1171 6 652 6291 0 0 0 chrU 8896583 8897269 -1151768 - DOC LINE Jockey -4037 688 3 6 652 4053 67 16 3 chrU 8897276 8897845 -1151192 - TART LINE telomeric -4860 9617 9042 6 652 2608 86 50 39 chrU 8897945 8899207 -1149830 - DMSAT6 Satellite Satellite -11 1275 1 6 652 3840 2 0 0 chrU 8899307 8899741 -1149296 - QUASIMODO_LTR LTR Gypsy -224 434 1 6 652 233 313 15 22 chrU 8899941 8900075 -1148962 - Gypsy9_I LTR Gypsy -1903 2774 2642 6 652 287 302 37 9 chrU 8900159 8900266 -1148771 - Gypsy7_I LTR Gypsy -1888 3096 2987 6 652 4631 52 11 11 chrU 8900669 8901286 -1147751 - MDG1_I LTR Gypsy -579 6017 5401 6 652 859 134 0 0 chrU 8901289 8901416 -1147621 - BS3_DM LINE Jockey -353 1437 1311 6 652 4022 70 4 0 chrU 8901406 8901923 -1147114 - BS3_DM LINE Jockey -746 1044 526 6 652 2729 155 119 0 chrU 8902357 8902912 -1146125 - IDEFIX_I LTR Gypsy -279 5349 4729 6 652 1945 157 58 5 chrU 8902909 8903287 -1145750 - IDEFIX_I LTR Gypsy -1129 4499 4102 6 652 9222 51 52 14 chrU 8903401 8904651 -1144386 + BATUMI_I LTR Pao 2624 3921 -4042 6 652 5947 20 31 0 chrU 8904751 8905964 -1143073 + R1_DM LINE R1 4104 5354 -2 6 652 6025 3 1 0 chrU 8906111 8906787 -1142250 - DOC LINE Jockey -2866 1859 1183 6 652 2356 114 140 4 chrU 8906797 8907371 -1141666 + TART LINE telomeric 7214 7670 -6807 6 652 6606 1 75 3 chrU 8907471 8908001 -1141036 + TART LINE telomeric 7198 7728 -6749 6 652 312 48 0 0 chrU 8908001 8908043 -1140994 + (TAAAG)n Simple_repeat Simple_repeat 3 44 0 6 652 6606 1 75 3 chrU 8908043 8908295 -1140742 + TART LINE telomeric 7729 8035 -6442 6 652 3990 0 2 0 chrU 8908295 8908731 -1140306 + TART_B1 LINE telomeric 8385 8821 -1833 6 652 3125 25 0 0 chrU 8908831 8909193 -1139844 + LSU-rRNA_Dme rRNA rRNA 3539 3900 0 6 652 225 195 0 0 chrU 8909205 8909246 -1139791 + LSU-rRNA_Dme rRNA rRNA 2580 2620 -1280 6 652 6595 24 1 5 chrU 8909296 8910091 -1138946 - G_DM LINE Jockey -15 4331 3540 6 652 2488 0 4 4 chrU 8910191 8910472 -1138565 - DM1731_I LTR Copia -3695 281 1 6 652 2383 44 54 45 chrU 8910472 8910805 -1138232 - DM1731_LTR LTR Copia 0 336 1 6 652 1587 17 0 2 chrU 8910805 8911442 -1137595 + (TATAA)n Simple_repeat Simple_repeat 1 635 0 6 652 1978 9 8 21 chrU 8911551 8911789 -1137248 + DM1731_I LTR Copia 3742 3976 0 6 652 2827 33 0 0 chrU 8911789 8912125 -1136912 + DM1731_LTR LTR Copia 1 336 0 6 652 395 95 0 0 chrU 8912125 8912187 -1136850 + ARS406_DM Unknown Unknown 10 71 -282 6 652 2815 178 11 10 chrU 8912194 8912808 -1136229 - SAR_DM Satellite Satellite -416 1056 442 6 653 5230 3 2 0 chrU 8912908 8913515 -1135522 - Gypsy5_I LTR Gypsy -469 6040 5433 6 653 5811 1 0 3 chrU 8913503 8914166 -1134871 - Gypsy5_I LTR Gypsy -4608 1901 1241 6 653 262 286 49 49 chrU 8914481 8914643 -1134394 - GTWIN_I LTR Gypsy -2137 4284 4123 6 653 739 336 15 7 chrU 8915153 8915524 -1133513 - GTWIN_I LTR Gypsy -2883 3538 3251 6 653 2721 0 0 0 chrU 8915624 8915927 -1133110 - NOMAD_LTR LTR Gypsy -215 303 1 6 653 2988 60 43 6 chrU 8915939 8916407 -1132630 + PROTOP DNA P 254 738 -3742 6 653 3863 28 21 4 chrU 8916407 8916882 -1132155 + G_DM LINE Jockey 2 484 -3862 6 653 5508 26 12 0 chrU 8916982 8917632 -1131405 - R1_DM LINE R1 -449 4907 4250 6 653 4975 16 2 3 chrU 8917655 8918239 -1130798 - R1_DM LINE R1 -1489 3867 3285 6 653 5652 138 62 14 chrU 8918340 8919592 -1129445 + HETA LINE telomeric 2068 3615 -2466 6 653 817 279 20 13 chrU 8919692 8919990 -1129047 - XDMR_DM Unknown Unknown -55 305 6 6 653 4331 223 35 29 chrU 8919724 8922290 -1126747 + SAR_DM Satellite Satellite 1 2579 -225 6 653 1770 135 37 10 chrU 8922398 8922698 -1126339 - DMRT1C LINE R1 -170 5273 4966 6 653 624 110 0 11 chrU 8922696 8922788 -1126249 - DMRT1C LINE R1 -701 4742 4652 6 653 6960 20 21 9 chrU 8922809 8923648 -1125389 + ACCORD2_I LTR Gypsy 47 895 -6317 6 653 770 268 32 26 chrU 8925099 8925409 -1123628 - XDMR_DM Unknown Unknown -31 329 18 6 653 4250 207 23 29 chrU 8925155 8926350 -1122687 + SAR_DM Satellite Satellite 57 1244 -228 6 653 295 329 52 42 chrU 8926787 8927184 -1121853 + BLASTOPIA_I LTR Gypsy 2178 2715 -2173 6 653 4908 48 33 6 chrU 8927801 8928437 -1120600 + HETA LINE telomeric 5429 6081 0 6 653 1435 161 57 89 chrU 8928475 8929047 -1119990 + HETA LINE telomeric 1 523 -5558 6 653 1459 193 147 37 chrU 8929933 8930395 -1118642 - TAHRE LINE telomeric -548 9915 9403 6 653 2330 40 3 60 chrU 8930535 8930852 -1118185 - MAX_I LTR Pao -7615 299 1 6 653 1917 110 70 0 chrU 8930852 8931152 -1117885 - MAX_LTR LTR Pao 0 321 1 6 653 24 32 0 0 chrU 8931848 8931879 -1117158 + AT_rich Low_complexity Low_complexity 1 31 0 6 653 381 12 5 135 chrU 8931882 8932075 -1116962 + (TTA)n Simple_repeat Simple_repeat 3 170 0 6 653 3179 116 2 31 chrU 8932106 8932603 -1116434 - R1-2_DM LINE R1 -1034 2182 1701 6 653 4475 0 0 0 chrU 8932603 8933095 -1115942 - ACCORD_LTR LTR Gypsy 0 558 67 6 653 387 327 50 57 chrU 8933784 8934189 -1114848 - Gypsy6_I LTR Gypsy -5228 1784 1437 6 653 3625 213 18 12 chrU 8934542 8935788 -1113249 - SAR_DM Satellite Satellite -681 1252 1 6 653 3197 166 18 13 chrU 8935890 8936487 -1112550 + Gypsy5_I LTR Gypsy 543 1142 -5367 6 653 5602 20 0 0 chrU 8936486 8937134 -1111903 + ACCORD2_I LTR Gypsy 4884 5531 -1681 6 653 690 44 11 11 chrU 8938579 8938671 -1110366 + BATUMI_LTR LTR Pao 181 272 0 6 653 5952 62 15 128 chrU 8938671 8939824 -1109213 + BATUMI_I LTR Pao 1 1022 -6941 6 653 7642 27 35 24 chrU 8939924 8940921 -1108116 + Gypsy12_LTR LTR Gypsy 1329 2336 0 6 653 3153 173 20 9 chrU 8941268 8942512 -1106525 + SAR_DM Satellite Satellite 1 1257 -529 6 653 387 133 0 0 chrU 8942612 8942672 -1106365 + TART_B1 LINE telomeric 6278 6337 -4317 6 653 7454 66 51 6 chrU 8942662 8943847 -1105190 + TART LINE telomeric 2046 3296 -11181 6 653 2110 35 14 7 chrU 8943955 8944244 -1104793 - BATUMI_I LTR Pao -1246 6717 6427 6 653 820 84 0 0 chrU 8944267 8944398 -1104639 + BATUMI_I LTR Pao 7303 7433 -530 6 653 1730 82 62 22 chrU 8944399 8944674 -1104363 + BATUMI_I LTR Pao 6999 7284 -679 6 653 3869 25 48 0 chrU 8944672 8945197 -1103840 - Invader2_I LTR Gypsy -2636 1956 1407 6 653 354 191 75 19 chrU 8945350 8945457 -1103580 + Copia_I LTR Copia 4401 4513 -80 6 653 34 24 0 0 chrU 8946215 8946256 -1102781 + AT_rich Low_complexity Low_complexity 1 41 0 6 653 504 105 47 9 chrU 8946275 8946381 -1102656 - TAHRE LINE telomeric -3998 10479 10370 6 653 2733 0 0 6 chrU 8946638 8946964 -1102073 + BATUMI_I LTR Pao 7640 7963 0 6 653 1192 40 6 39 chrU 8946964 8947141 -1101896 + BATUMI_I LTR Pao 7002 7172 -791 6 653 564 158 49 28 chrU 8947146 8947289 -1101748 - DM297_I LTR Gypsy -6021 146 1 6 653 1728 72 4 4 chrU 8947289 8947539 -1101498 - DMTOM1_LTR LTR Gypsy 0 410 161 6 653 800 185 24 71 chrU 8947669 8947879 -1101158 + Gypsy5_LTR LTR Gypsy 1 200 -230 6 653 3837 193 22 22 chrU 8947986 8949220 -1099817 - SAR_DM Satellite Satellite -242 1234 1 6 653 4919 115 30 39 chrU 8949320 8950560 -1098477 - TAHRE LINE telomeric -6 10457 8037 6 653 1874 54 27 8 chrU 8950660 8950923 -1098114 - BATUMI_I LTR Pao -7695 268 1 6 653 2159 21 0 31 chrU 8950923 8951215 -1097822 - BATUMI_I LTR Pao -679 7284 7002 6 653 24 53 0 0 chrU 8951844 8951882 -1097155 + AT_rich Low_complexity Low_complexity 1 38 0 6 653 2828 174 8 7 chrU 8952000 8953240 -1095797 + SAR_DM Satellite Satellite 1 1240 -610 6 653 1664 49 5 5 chrU 8954680 8954904 -1094133 - ACCORD2_I LTR Gypsy -4861 2351 2128 6 653 2399 72 32 46 chrU 8954902 8955341 -1093696 - ACCORD2_I LTR Gypsy -5197 2015 1583 6 653 3120 41 81 7 chrU 8955437 8955625 -1093412 - ACCORD2_I LTR Gypsy -5845 1367 1178 6 653 255 79 0 0 chrU 8955625 8955663 -1093374 + (TTA)n Simple_repeat Simple_repeat 2 39 0 6 653 3120 41 81 7 chrU 8955663 8955919 -1093118 - ACCORD2_I LTR Gypsy -6035 1177 891 6 653 1367 23 0 6 chrU 8957358 8957530 -1091507 - DM1731_LTR LTR Copia -165 171 1 6 653 314 318 27 28 chrU 8957536 8957805 -1091232 + BURDOCK_I LTR Gypsy 3295 3709 -2798 6 653 3824 199 16 17 chrU 8958696 8959934 -1089103 + SAR_DM Satellite Satellite 1 1236 -208 6 653 949 52 7 0 chrU 8960034 8960169 -1088868 + ARS406_DM Unknown Unknown 54 189 -164 6 653 3991 203 12 19 chrU 8960072 8961272 -1087765 - SAR_DM Satellite Satellite -208 1191 1 6 653 5994 6 1 0 chrU 8961372 8962070 -1086967 - R2_DM LINE R2 -484 3123 2425 6 653 1170 7 0 0 chrU 8962074 8962209 -1086828 - LSU-rRNA_Dme rRNA rRNA -1978 1922 1788 6 653 2967 0 6 6 chrU 8962253 8962610 -1086427 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1432 6 653 2031 201 83 29 chrU 8962710 8963411 -1085626 + SAR_DM Satellite Satellite 516 1254 -218 6 653 3898 15 155 11 chrU 8963413 8963948 -1085089 - DOC2_DM LINE Jockey 0 4793 4182 6 653 1033 8 8 0 chrU 8964050 8964176 -1084861 - NOMAD_I LTR Gypsy -6445 127 1 6 653 4527 0 0 0 chrU 8964176 8964694 -1084343 - NOMAD_LTR LTR Gypsy 0 518 1 6 653 33 0 0 0 chrU 8964694 8964727 -1084310 + AT_rich Low_complexity Low_complexity 1 33 0 6 653 3153 30 134 2 chrU 8964839 8965279 -1083758 + PROTOP DNA P 1 498 -3982 6 653 8458 23 26 1 chrU 8966722 8967818 -1081219 + QUASIMODO_I LTR Gypsy 3869 4992 -1068 6 653 5509 32 3 3 chrU 8968060 8968755 -1080282 - R1_DM LINE R1 -103 5253 4559 6 653 4388 24 2 2 chrU 8968753 8969295 -1079742 - R1_DM LINE R1 -1270 4086 3545 6 653 4765 25 7 5 chrU 8969395 8969990 -1079047 + CIRCE LINE Composite 3072 3667 -2689 6 653 3104 31 0 28 chrU 8970000 8970400 -1078637 + CIRCE LINE Composite 1494 1882 -4474 6 653 410 307 25 20 chrU 8970409 8970605 -1078432 + Gypsy12_I LTR Gypsy 3835 4031 -1515 6 653 1199 7 7 39 chrU 8970476 8970631 -1078406 + CIRCE LINE Composite 1888 2037 -4319 6 653 3260 74 137 6 chrU 8970739 8971258 -1077779 - TART LINE telomeric -6449 8028 7442 6 653 4358 36 113 47 chrU 8971260 8971966 -1077071 - PROTOP_A DNA P 0 1105 353 6 653 3421 12 0 0 chrU 8972066 8972468 -1076569 + R1_DM LINE R1 4955 5356 0 6 653 1208 60 6 0 chrU 8972501 8972668 -1076369 + R1_DM LINE R1 1 168 -5188 6 653 4861 43 3 2 chrU 8972666 8973301 -1075736 + R1_DM LINE R1 638 1273 -4083 6 653 255 0 0 0 chrU 8973401 8973432 -1075605 - IDEFIX_LTR LTR Gypsy -387 207 177 6 653 4204 63 81 8 chrU 8973437 8974151 -1074886 - IDEFIX_I LTR Gypsy -80 5548 4783 6 653 2270 113 192 2 chrU 8974133 8974622 -1074415 - IDEFIX_I LTR Gypsy -1506 4122 3541 6 653 672 101 0 0 chrU 8976073 8976172 -1072865 + Gypsy12_I LTR Gypsy 1456 1554 -3992 6 653 2196 107 0 12 chrU 8976179 8976502 -1072535 + Gypsy12_I LTR Gypsy 1503 1821 -3725 6 653 3879 79 133 11 chrU 8976499 8977304 -1071733 + Gypsy12_I LTR Gypsy 4465 5367 -179 6 653 4233 29 0 4 chrU 8977404 8977958 -1071079 + QUASIMODO_I LTR Gypsy 636 1187 -4873 6 653 1018 100 4 33 chrU 8977958 8978145 -1070892 - STALKER4_LTR LTR Gypsy -3 399 227 6 653 3672 15 0 65 chrU 8978145 8978638 -1070399 - MICROPIA_LTR LTR Gypsy 0 476 16 6 653 6233 85 66 49 chrU 8978738 8979839 -1069198 - MAX_I LTR Pao -5875 2039 920 6 653 514 44 15 0 chrU 8979904 8979972 -1069065 - MAX_I LTR Pao -7241 673 605 6 653 1928 12 17 0 chrU 8980072 8980313 -1068724 - STALKER4_I LTR Gypsy -3309 3221 2977 6 653 6168 20 117 2 chrU 8980304 8981306 -1067731 - STALKER4_I LTR Gypsy -4140 2390 1274 6 653 5006 15 0 7 chrU 8981406 8982012 -1067025 + FW_DM LINE Jockey 3807 4408 -284 6 653 5059 25 29 0 chrU 8982011 8982639 -1066398 + R1_DM LINE R1 1884 2529 -2827 6 653 1253 56 0 0 chrU 8982739 8982899 -1066138 + BATUMI_I LTR Pao 3635 3794 -4169 6 653 5293 129 20 19 chrU 8982903 8983972 -1065065 + BATUMI_I LTR Pao 4176 5242 -2672 6 653 1080 184 60 69 chrU 8984125 8984475 -1064562 + HMSBEAGLE_I LTR Gypsy 6022 6368 -161 6 653 272 130 0 0 chrU 8984738 8984784 -1064253 + HMSBEAGLE_I LTR Gypsy 6360 6405 -124 6 653 227 88 0 0 chrU 8984883 8984917 -1064120 + HMSBEAGLE_I LTR Gypsy 6404 6437 -92 6 653 506 223 8 15 chrU 8984913 8985045 -1063992 + DMLTR5 LTR Gypsy 136 266 0 6 653 424 246 0 0 chrU 8985189 8985299 -1063738 + BS LINE Jockey 1330 1439 -3687 6 653 267 304 26 0 chrU 8986467 8986582 -1062455 + FW3_DM LINE Jockey 2594 2711 -421 6 653 989 0 0 0 chrU 8986736 8986851 -1062186 - NOMAD_I LTR Gypsy -6457 115 1 6 653 4527 0 0 0 chrU 8986851 8987369 -1061668 - NOMAD_LTR LTR Gypsy 0 518 1 6 653 439 68 0 0 chrU 8987369 8987443 -1061594 + PROTOP DNA P 750 823 -3657 6 653 4184 17 2 4 chrU 8987438 8987968 -1061069 + PROTOP DNA P 3802 4330 -150 6 653 2195 67 36 3 chrU 8988068 8988400 -1060637 - BATUMI_I LTR Pao -314 7649 7307 6 653 2094 42 11 11 chrU 8988401 8988688 -1060349 + BATUMI_I LTR Pao 6528 6814 -1149 6 653 4797 40 0 8 chrU 8988691 8989300 -1059737 - BATUMI_I LTR Pao -1862 6101 5498 6 653 1663 287 67 56 chrU 8989534 8990580 -1058457 - ROVER-I_DM LTR Gypsy -4857 1727 330 6 653 966 16 8 8 chrU 8990731 8990853 -1058184 - Gypsy_LTR LTR Gypsy -360 122 1 6 653 1485 165 111 121 chrU 8990858 8991962 -1057075 + MAX_I LTR Pao 557 1528 -6386 6 653 9983 25 14 2 chrU 8992062 8993293 -1055744 - Gypsy12_I LTR Gypsy -2728 2818 1574 6 653 1104 70 116 0 chrU 8993774 8993946 -1055091 - PROTOP_B DNA P 0 1153 962 6 653 556 130 72 92 chrU 8993955 8994150 -1054887 - Gypsy_LTR LTR Gypsy -145 337 147 6 653 4254 8 2 0 chrU 8994737 8995231 -1053806 - GTWIN_LTR LTR Gypsy 0 495 1 6 653 6013 11 24 4 chrU 8995231 8995955 -1053082 + Invader2_I LTR Gypsy 881 1619 -2973 6 653 2807 135 20 46 chrU 8996081 8996625 -1052412 + Gypsy12_LTR LTR Gypsy 1775 2304 -32 6 653 4325 111 0 12 chrU 8996627 8997285 -1051752 + Gypsy12_I LTR Gypsy 2735 3384 -2162 6 653 3993 11 10 6 chrU 8997385 8997866 -1051171 + DMRT1B LINE R1 4701 5183 0 6 653 6138 20 0 0 chrU 8997866 8998614 -1050423 + FW_DM LINE Jockey 1435 2182 -2510 6 653 540 178 38 88 chrU 8999635 8999795 -1049242 + Gypsy5_LTR LTR Gypsy 131 282 -148 6 653 9325 42 8 1 chrU 9000043 9001272 -1047765 - IDEFIX_I LTR Gypsy -4164 1464 227 6 653 2675 164 8 10 chrU 9001372 9001957 -1047080 + SAR_DM Satellite Satellite 410 993 -479 6 653 1734 199 81 30 chrU 9002030 9002600 -1046437 + SAR_DM Satellite Satellite 57 655 -817 6 653 9820 42 3 0 chrU 9002700 9003928 -1045109 - Baggins1 LINE LOA -3064 2389 1158 6 653 1038 96 0 6 chrU 9004028 9004185 -1044852 - TART LINE telomeric -7517 6960 6805 6 653 1555 128 3 52 chrU 9004195 9004483 -1044554 - TART LINE telomeric -10520 3957 3684 6 653 4262 86 66 45 chrU 9004479 9005255 -1043782 - TART LINE telomeric -11115 3362 2571 6 653 704 110 288 7 chrU 9005785 9005931 -1043106 - DNAREP1_DM LINE Penelope -99 495 309 6 653 593 137 392 8 chrU 9006018 9006283 -1042754 + PROTOP DNA P 677 1043 -3437 6 653 495 124 39 0 chrU 9006280 9006396 -1042641 + PROTOP DNA P 4148 4272 -208 6 653 5381 3 1 0 chrU 9006682 9007337 -1041700 - Stalker2_I LTR Gypsy -3385 4017 3362 6 653 4736 2 4 0 chrU 9007352 9007909 -1041128 - Stalker2_I LTR Gypsy -4381 3021 2463 6 653 228 114 0 0 chrU 9008377 9008412 -1040625 + Invader1_I LTR Gypsy 3152 3186 0 6 653 335 165 43 11 chrU 9008946 9009038 -1039999 + Copia_I LTR Copia 4402 4496 -97 6 653 4421 54 109 0 chrU 9009872 9010560 -1038477 + PROTOP DNA P 1 750 -3730 6 653 2201 122 30 13 chrU 9010664 9011268 -1037769 - DMSAT6 Satellite Satellite -230 614 1 6 653 2538 90 12 30 chrU 9011295 9011890 -1037147 - DMSAT6 Satellite Satellite 0 583 1 6 653 380 326 24 33 chrU 9012756 9013152 -1035885 + BURDOCK_I LTR Gypsy 850 992 -4868 6 653 1252 18 0 6 chrU 9013344 9013509 -1035528 + NTS_DM Other Other 38 201 -39 6 653 870 9 0 27 chrU 9013561 9013673 -1035364 + NTS_DM Other Other 25 133 -107 6 653 1252 18 0 6 chrU 9013673 9013838 -1035199 + NTS_DM Other Other 38 201 -39 6 653 806 19 0 28 chrU 9013890 9013995 -1035042 + NTS_DM Other Other 25 126 -114 6 653 3368 5 7 7 chrU 9013995 9014409 -1034628 + DM297_LTR LTR Gypsy 1 414 0 6 653 1053 30 0 0 chrU 9014409 9014542 -1034495 + DM297_I LTR Gypsy 1 133 -6034 6 653 9294 33 28 0 chrU 9014642 9015220 -1033817 - MDG1_I LTR Gypsy -2354 4242 3660 6 653 203 0 0 36 chrU 9015220 9015248 -1033789 + (TTG)n Simple_repeat Simple_repeat 1 27 0 6 653 9294 33 28 0 chrU 9015248 9015868 -1033169 - MDG1_I LTR Gypsy -2937 3659 3011 6 653 1055 24 0 0 chrU 9015970 9016096 -1032941 - IDEFIX_I LTR Gypsy -4126 1502 1377 6 653 4431 87 8 0 chrU 9016091 9016750 -1032287 - IDEFIX_I LTR Gypsy -4528 1100 437 6 653 1028 88 0 0 chrU 9016751 9016910 -1032127 - STALKER4_I LTR Gypsy -3072 3458 3300 6 653 1975 4 86 0 chrU 9016910 9017155 -1031882 - Invader2_LTR LTR Gypsy 0 266 1 6 653 241 81 0 0 chrU 9017156 9017193 -1031844 - STALKER4_I LTR Gypsy -3228 3302 3266 6 653 3892 4 0 0 chrU 9017293 9017742 -1031295 - DMRT1B LINE R1 -1046 4137 3689 6 653 1889 0 0 9 chrU 9017742 9017962 -1031075 - BLOOD_LTR LTR Gypsy 0 399 182 6 653 4251 2 0 7 chrU 9017964 9018518 -1030519 - BLOOD_I LTR Gypsy 0 6613 6064 6 653 2665 228 73 64 chrU 9021268 9022465 -1026572 + Gypsy12_LTR LTR Gypsy 485 1691 -645 6 653 2278 154 30 92 chrU 9022593 9023286 -1025751 - HETA LINE telomeric -5036 1045 396 6 653 1696 190 102 19 chrU 9023283 9023799 -1025238 - TART LINE telomeric -3420 11057 10104 6 653 804 154 7 0 chrU 9023918 9024061 -1024976 + Gypsy12A_LTR LTR Gypsy 2137 2280 0 6 653 1925 112 166 24 chrU 9024061 9024471 -1024566 + Gypsy12_I LTR Gypsy 1 468 -5078 6 653 2081 105 11 45 chrU 9024488 9024867 -1024170 + Gypsy12_I LTR Gypsy 611 976 -4570 6 653 287 264 0 0 chrU 9024874 9024961 -1024076 + TOM_I LTR Gypsy 3276 3362 -2750 6 653 773 161 6 42 chrU 9024974 9025142 -1023895 + Gypsy12_LTR LTR Gypsy 1 162 -2174 6 653 204 40 0 0 chrU 9025711 9025736 -1023301 + (TTG)n Simple_repeat Simple_repeat 2 26 0 6 653 4121 45 36 4 chrU 9025907 9026466 -1022571 + PROTOP DNA P 1 577 -3903 6 653 8242 48 46 38 chrU 9026566 9027790 -1021247 + BATUMI_I LTR Pao 1674 2906 -5057 6 653 10271 9 33 1 chrU 9027890 9029112 -1019925 - Invader1_I LTR Gypsy -1575 1611 351 6 653 1619 113 78 0 chrU 9029751 9030034 -1019003 + DNAREP1_DM LINE Penelope 254 558 -36 6 653 406 174 306 15 chrU 9030095 9030229 -1018808 + DNAREP1_DM LINE Penelope 422 594 0 6 653 511 193 17 96 chrU 9030259 9030437 -1018600 - PROTOP_B DNA P -656 497 334 6 653 3377 5 0 7 chrU 9030564 9030969 -1018068 - STALKER4_LTR LTR Gypsy 0 402 1 6 653 1610 195 40 29 chrU 9030996 9031449 -1017588 - Stalker2_I LTR Gypsy -6654 748 291 6 653 28 48 0 0 chrU 9031456 9031498 -1017539 + AT_rich Low_complexity Low_complexity 1 42 0 6 653 882 73 16 0 chrU 9031636 9031760 -1017277 - STALKER4_LTR LTR Gypsy -23 379 254 6 653 961 66 0 0 chrU 9031860 9031997 -1017040 + ARS406_DM Unknown Unknown 53 189 -164 6 653 3787 207 17 20 chrU 9031900 9033083 -1015954 - SAR_DM Satellite Satellite -208 1179 1 6 653 1696 36 0 0 chrU 9033183 9033403 -1015634 + ROO_I LTR Pao 3986 4205 -4051 6 653 1989 27 0 8 chrU 9033399 9033657 -1015380 - FW_DM LINE Jockey 0 4692 4437 6 653 664 24 12 0 chrU 9033648 9033733 -1015304 - FW_DM LINE Jockey -2007 2685 2600 6 653 2984 19 27 0 chrU 9033759 9034131 -1014906 - FW_DM LINE Jockey -2561 2131 1750 6 653 1569 43 192 30 chrU 9034140 9034405 -1014632 + ROO_I LTR Pao 4193 4500 -3756 6 653 3337 91 73 2 chrU 9034505 9035066 -1013971 - TART_B1 LINE telomeric -7941 2713 2113 6 653 2112 185 24 84 chrU 9035068 9035724 -1013313 - TART_B1 LINE telomeric -9086 1568 952 6 653 2653 176 29 19 chrU 9035827 9037048 -1011989 - SAR_DM Satellite Satellite -667 1232 1 6 653 1608 44 4 42 chrU 9037148 9037387 -1011650 + BATUMI_LTR LTR Pao 43 272 0 6 653 7609 18 25 0 chrU 9037387 9038369 -1010668 - Invader2_I LTR Gypsy -1067 3525 2519 6 653 7917 29 8 5 chrU 9038469 9039483 -1009554 - PROTOP_A DNA P -88 1017 1 6 653 377 130 10 42 chrU 9039483 9039579 -1009458 + ACCORD2_I LTR Gypsy 1874 1966 -5246 6 653 21 89 0 0 chrU 9039877 9039933 -1009104 + AT_rich Low_complexity Low_complexity 1 56 0 6 653 23 68 0 0 chrU 9039971 9040015 -1009022 + AT_rich Low_complexity Low_complexity 1 44 0 6 653 28 71 0 0 chrU 9040061 9040117 -1008920 + AT_rich Low_complexity Low_complexity 1 56 0 6 653 891 67 37 0 chrU 9040258 9040393 -1008644 - PROTOP_A DNA P -594 511 372 6 653 737 198 180 58 chrU 9040517 9040945 -1008092 - TAHRE LINE telomeric -3988 10489 9807 6 653 349 189 14 0 chrU 9040935 9041009 -1008028 - Gypsy12A_LTR LTR Gypsy -18 2262 2188 6 653 3446 32 0 0 chrU 9041109 9041547 -1007490 - MAX_I LTR Pao -96 7818 7381 6 653 5474 50 6 6 chrU 9041584 9042329 -1006708 - MAX_I LTR Pao -538 7376 6563 6 653 5483 5 0 0 chrU 9042429 9043064 -1005973 + DMRT1B LINE R1 4549 5183 0 6 653 4621 16 5 3 chrU 9043084 9043649 -1005388 - R1_DM LINE R1 -2784 2572 2007 6 81 2903 8 8 8 chrU 9043749 9044112 -1004925 + DM297_LTR LTR Gypsy 52 414 0 6 654 1728 27 0 0 chrU 9044112 9044332 -1004705 + DM297_I LTR Gypsy 1 220 -5947 6 654 4748 5 0 0 chrU 9044388 9044968 -1004069 + DM297_I LTR Gypsy 3458 4037 -2130 6 654 299 290 30 8 chrU 9045341 9045473 -1003564 + Invader4_I LTR Gypsy 1 135 -2278 6 654 373 303 36 36 chrU 9045584 9045861 -1003176 + Invader1_I LTR Gypsy 950 1226 -1960 6 654 555 41 299 0 chrU 9046387 9046484 -1002553 - IDEFIX_LTR LTR Gypsy -468 126 1 6 654 239 125 0 0 chrU 9046452 9046492 -1002545 + BARI1 DNA Tc1 3 42 -1708 6 654 338 305 0 32 chrU 9046723 9046879 -1002158 - GTWIN_I LTR Gypsy -1797 4710 4560 6 654 855 295 68 18 chrU 9046886 9047363 -1001674 - GTWIN_I LTR Gypsy -2070 4437 3942 6 654 2305 87 14 37 chrU 9047706 9048913 -1000124 - DMSAT6 Satellite Satellite -44 1179 1 6 654 257 56 0 0 chrU 9049025 9049061 -999976 + Stalker2_I LTR Gypsy 6 41 -7361 6 654 2132 148 68 11 chrU 9049259 9049703 -999334 + Stalker2_I LTR Gypsy 242 710 -6692 6 654 461 287 5 9 chrU 9049999 9050210 -998827 + TABOR_I LTR Gypsy 2344 2553 -3783 6 654 2307 47 3 10 chrU 9050788 9051091 -997946 - DIVER2_LTR LTR Pao 0 385 85 6 654 2569 16 3 0 chrU 9051089 9051398 -997639 - DIVER2_I LTR Pao -95 4052 3743 6 654 963 28 0 139 chrU 9051396 9051561 -997476 - DIVER2_I LTR Pao -2572 1575 1434 6 654 3247 166 130 41 chrU 9051662 9052524 -996513 + HETA LINE telomeric 4862 5800 -281 6 654 1036 89 15 40 chrU 9052524 9052722 -996315 + TART LINE telomeric 10471 10663 -3814 6 654 423 62 87 18 chrU 9052720 9052798 -996239 + TART LINE telomeric 10380 10452 -11 6 654 369 121 11 67 chrU 9052788 9052877 -996160 + TART LINE telomeric 6985 7068 -7409 6 654 840 301 7 7 chrU 9052977 9053255 -995782 + Gypsy6_I LTR Gypsy 6734 7011 -1 6 654 1696 111 16 60 chrU 9053258 9053574 -995463 + Gypsy6A_LTR LTR Gypsy 1 302 -118 6 654 247 247 11 45 chrU 9053625 9053714 -995323 + (CATATA)n Simple_repeat Simple_repeat 5 90 0 6 654 1098 95 6 6 chrU 9053959 9054128 -994909 + MAX_I LTR Pao 557 725 -7189 6 654 270 57 151 0 chrU 9054139 9054192 -994845 + MAX_I LTR Pao 824 884 -7030 6 654 9006 64 61 5 chrU 9055606 9056819 -992218 + IDEFIX_I LTR Gypsy 721 2001 -3627 6 654 277 253 90 50 chrU 9056942 9057042 -991995 + DNAREP1_DM LINE Penelope 489 592 -2 6 654 391 149 10 147 chrU 9057282 9057384 -991653 - DNAREP1_DM LINE Penelope -6 588 501 6 654 1057 53 16 120 chrU 9057388 9057579 -991458 + S2_DM DNA Tc1 1 171 -1564 6 654 354 173 0 58 chrU 9057598 9057684 -991353 - DNAREP1_DM LINE Penelope -26 568 488 6 654 315 165 117 58 chrU 9057807 9057910 -991127 - Gypsy2_LTR LTR Gypsy -150 203 95 6 654 254 286 0 0 chrU 9057924 9057994 -991043 - Gypsy2_I LTR Gypsy -91 6044 5975 6 654 483 299 0 0 chrU 9058005 9058132 -990905 - Gypsy6_I LTR Gypsy -172 6840 6714 6 654 10419 24 0 3 chrU 9058232 9059444 -989593 - R1_DM LINE R1 -1667 3689 2482 6 654 5096 21 3 9 chrU 9059545 9060129 -988908 + Gypsy12_I LTR Gypsy 723 1303 -4243 6 654 5460 24 9 6 chrU 9060126 9060756 -988281 + Gypsy12_I LTR Gypsy 1524 2155 -3391 6 654 10528 22 12 0 chrU 9060856 9062067 -986970 + R1_DM LINE R1 1567 2791 -2565 6 654 3878 2 2 0 chrU 9062168 9062600 -986437 - G6_DM LINE Jockey -1609 433 1 6 654 1572 11 0 0 chrU 9062598 9062773 -986264 - DM1731_LTR LTR Copia -161 175 1 6 654 3188 134 29 0 chrU 9062773 9063297 -985740 - IDEFIX_I LTR Gypsy -290 5338 4800 6 654 11188 0 2 2 chrU 9063479 9064690 -984347 - SSU-rRNA_Dme rRNA rRNA -88 1907 698 6 654 4034 216 14 20 chrU 9064790 9065984 -983053 - SAR_DM Satellite Satellite -450 1186 1 6 654 835 62 9 0 chrU 9065889 9066001 -983036 + ARS406_DM Unknown Unknown 1 113 -240 6 654 1740 23 14 9 chrU 9066101 9066320 -982717 + ACCORD2_I LTR Gypsy 1148 1367 -5845 6 654 1084 46 235 23 chrU 9066401 9066622 -982415 + ACCORD2_I LTR Gypsy 1507 1774 -5438 6 654 1107 27 191 16 chrU 9066633 9066822 -982215 + ACCORD2_I LTR Gypsy 1553 1774 -5438 6 654 1148 83 21 103 chrU 9066833 9067075 -981962 + ACCORD2_I LTR Gypsy 1553 1774 -5438 6 654 616 71 0 12 chrU 9067068 9067152 -981885 + ACCORD2_I LTR Gypsy 7122 7204 -8 6 654 1338 19 0 25 chrU 9067152 9067311 -981726 + ACCORD2_LTR LTR Gypsy 1 155 -60 6 654 9540 31 17 2 chrU 9067413 9068579 -980458 - DMRT1B LINE R1 -4039 1144 1 6 654 1878 241 8 11 chrU 9069030 9069544 -979493 + DM297_I LTR Gypsy 3672 4303 -1864 6 654 30 0 0 0 chrU 9069636 9069666 -979371 + AT_rich Low_complexity Low_complexity 1 30 0 6 654 208 273 47 8 chrU 9069708 9069837 -979200 + A-rich Low_complexity Low_complexity 2 135 0 6 654 21 0 0 0 chrU 9071042 9071063 -977974 + AT_rich Low_complexity Low_complexity 1 21 0 6 654 513 42 0 90 chrU 9071163 9071241 -977796 + ROO_I LTR Pao 258 328 -7928 6 654 877 62 14 84 chrU 9071341 9071483 -977554 + BLOOD_LTR LTR Gypsy 127 258 -141 6 654 7585 25 113 3 chrU 9071598 9072550 -976487 + BLOOD_I LTR Gypsy 1 1057 -5556 6 654 4155 211 29 30 chrU 9072650 9073803 -975234 - SAR_DM Satellite Satellite -264 1208 57 6 654 964 261 23 16 chrU 9073537 9073845 -975192 + XDMR_DM Unknown Unknown 6 315 -45 6 654 3625 0 0 0 chrU 9073959 9074350 -974687 + Copia_I LTR Copia 4203 4593 0 6 654 2449 4 0 0 chrU 9074350 9074626 -974411 + Copia_LTR LTR Copia 1 276 0 6 654 377 261 114 96 chrU 9074687 9074967 -974070 + Invader1_LTR LTR Gypsy 84 368 -55 6 654 6900 181 7 2 chrU 9075272 9076477 -972560 + ROVER-I_DM LTR Gypsy 3584 4793 -1791 6 654 1750 292 95 42 chrU 9076577 9077730 -971307 + TOM_I LTR Gypsy 769 1982 -4130 6 654 2876 121 18 49 chrU 9077886 9078433 -970604 - BATUMI_I LTR Pao -6685 1278 749 6 654 382 78 0 115 chrU 9078474 9078553 -970484 - BATUMI_I LTR Pao -7194 769 701 6 654 4100 33 4 2 chrU 9078553 9079034 -970003 - Gypsy_LTR LTR Gypsy 0 482 1 6 654 494 34 0 0 chrU 9079034 9079093 -969944 - Gypsy_I LTR Gypsy 0 6507 6449 6 654 933 17 9 0 chrU 9079194 9079309 -969728 - Invader2_I LTR Gypsy -4476 116 1 6 654 2216 27 27 0 chrU 9079309 9079518 -969519 - Invader2_LTR LTR Gypsy 0 266 58 6 654 342 0 0 0 chrU 9079518 9079556 -969481 + (CTATA)n Simple_repeat Simple_repeat 2 39 0 6 654 2216 27 27 0 chrU 9079556 9079605 -969432 - Invader2_LTR LTR Gypsy -209 57 2 6 654 1385 161 71 11 chrU 9079613 9079896 -969141 + IDEFIX_I LTR Gypsy 3158 3457 -2171 6 654 1469 143 0 16 chrU 9079872 9080114 -968923 + IDEFIX_I LTR Gypsy 3784 4021 -1607 6 654 288 0 0 0 chrU 9080114 9080146 -968891 + (CAAT)n Simple_repeat Simple_repeat 1 32 0 6 654 976 143 0 7 chrU 9080154 9080309 -968728 + IDEFIX_I LTR Gypsy 4064 4217 -1411 6 654 373 113 0 0 chrU 9080326 9080379 -968658 + IDEFIX_I LTR Gypsy 4854 4906 -722 6 654 2270 12 0 0 chrU 9080502 9080750 -968287 + R1_DM LINE R1 5109 5356 0 6 654 2345 65 7 7 chrU 9080783 9081092 -967945 + R1_DM LINE R1 1 309 -5047 6 654 664 71 0 0 chrU 9081089 9081173 -967864 + R1_DM LINE R1 1503 1586 -3770 6 654 4702 19 0 0 chrU 9081173 9081710 -967327 + R1_DM LINE R1 1749 2285 -3071 6 654 2005 21 0 0 chrU 9081810 9082047 -966990 + FW_DM LINE Jockey 4456 4692 0 6 654 1189 189 0 15 chrU 9082048 9082462 -966575 - TAHRE LINE telomeric -9343 1120 828 6 654 864 54 0 26 chrU 9082459 9082574 -966463 - BATUMI_I LTR Pao -678 7285 7174 6 654 819 0 0 11 chrU 9082573 9082666 -966371 + BATUMI_I LTR Pao 6910 7001 -962 6 654 2950 75 0 0 chrU 9082587 9083018 -966019 - BATUMI_I LTR Pao -1146 6768 6095 6 654 3449 253 57 15 chrU 9083118 9084326 -964711 - STALKER4_I LTR Gypsy -2512 4018 2760 6 654 10602 10 28 1 chrU 9084426 9085633 -963404 + DOC2_DM LINE Jockey 2653 3892 -901 6 654 3636 0 0 0 chrU 9085733 9086125 -962912 - Copia_I LTR Copia -4201 392 1 6 654 2456 4 0 0 chrU 9086125 9086401 -962636 - Copia_LTR LTR Copia 0 276 1 6 654 4159 27 2 2 chrU 9087039 9087528 -961509 + IDEFIX_LTR LTR Gypsy 106 594 0 6 654 5794 43 4 12 chrU 9087528 9088245 -960792 + IDEFIX_I LTR Gypsy 1771 2481 -3147 6 654 10032 15 4 2 chrU 9088345 9089551 -959486 + QUASIMODO_I LTR Gypsy 4440 5648 -412 6 654 3804 104 25 7 chrU 9089706 9090266 -958771 - DM176_I LTR Gypsy -2814 3606 3037 6 654 5102 25 0 0 chrU 9090263 9090856 -958181 + MDG1_I LTR Gypsy 3155 3747 -2849 6 654 5318 20 0 2 chrU 9090956 9091569 -957468 + MDG1_I LTR Gypsy 5152 5763 -833 6 654 3849 20 0 0 chrU 9091569 9092011 -957026 - MDG1_LTR LTR Gypsy 0 442 1 6 654 1130 0 0 13 chrU 9092011 9092161 -956876 - MDG1_I LTR Gypsy 0 6596 6449 6 654 27 49 0 0 chrU 9092755 9092796 -956241 + AT_rich Low_complexity Low_complexity 1 41 0 6 654 503 163 130 17 chrU 9092799 9093032 -956005 - TART LINE telomeric -3986 10491 10373 6 654 800 180 35 126 chrU 9093032 9093293 -955744 + Gypsy3_LTR LTR Gypsy 1 237 -161 6 654 6402 178 13 16 chrU 9093566 9094771 -954266 + ROVER-I_DM LTR Gypsy 4040 5241 -1343 6 654 8057 48 30 21 chrU 9094871 9096075 -952962 - TART LINE telomeric -481 13996 12606 6 654 334 328 54 58 chrU 9096815 9097379 -951658 + Invader3_I LTR Gypsy 2144 2591 -1890 6 654 10326 26 5 0 chrU 9097479 9098682 -950355 + NINJA_I LTR Pao 3345 4553 -1458 6 654 3962 198 51 14 chrU 9100085 9101283 -947754 + SAR_DM Satellite Satellite 1 1241 -590 6 654 3143 45 0 0 chrU 9101388 9101764 -947273 + STALKER4_I LTR Gypsy 5387 5762 -768 6 654 7095 21 1 5 chrU 9101771 9102591 -946446 - DOC2_DM LINE Jockey 0 4793 3977 6 654 6728 121 31 8 chrU 9102691 9103894 -945143 + BATUMI_I LTR Pao 3445 4744 -3170 6 654 9053 95 5 2 chrU 9103994 9105195 -943842 + Gypsy12_I LTR Gypsy 3216 4420 -1126 6 654 4292 34 2 17 chrU 9105296 9105832 -943205 - BATUMI_I LTR Pao -4749 3214 2687 6 654 5210 27 5 13 chrU 9105870 9106498 -942539 - BATUMI_I LTR Pao -5528 2435 1813 6 654 934 82 310 0 chrU 9106598 9106769 -942268 + NINJA_I LTR Pao 3088 3311 -2700 6 654 511 49 0 0 chrU 9106758 9106819 -942218 + NINJA_I LTR Pao 3665 3725 -2286 6 654 5964 110 138 3 chrU 9106816 9107799 -941238 + NINJA_I LTR Pao 4099 5214 -797 6 654 5482 39 8 1 chrU 9107899 9108769 -940268 - R1_DM LINE R1 -555 4801 3275 6 654 2740 28 0 6 chrU 9108772 9109100 -939937 - R1_DM LINE R1 -2214 3142 2817 6 654 5101 5 0 0 chrU 9109200 9109756 -939281 - DMRT1B LINE R1 -1260 3923 3368 6 654 5874 2 0 0 chrU 9109764 9110400 -938637 - DMRT1A LINE R1 -793 4390 3755 6 654 581 161 16 48 chrU 9110510 9110634 -938403 - Gypsy12_LTR LTR Gypsy -2216 120 1 6 654 2286 82 0 3 chrU 9110633 9110925 -938112 - Gypsy12_I LTR Gypsy 0 5546 5256 6 654 2802 75 0 3 chrU 9110923 9111273 -937764 - Gypsy12_I LTR Gypsy -887 4659 4311 6 654 3245 99 0 0 chrU 9111272 9111698 -937339 - Gypsy12_I LTR Gypsy -1124 4422 3997 6 654 5805 5 2 3 chrU 9111800 9112444 -936593 - R2_DM LINE R2 -1833 1774 1132 6 654 5204 2 0 0 chrU 9112429 9113000 -936037 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2011 6 654 290 184 82 41 chrU 9113102 9113359 -935678 + (TCTG)n Simple_repeat Simple_repeat 1 267 0 6 654 330 228 105 0 chrU 9113388 9113550 -935487 + (TTCTG)n Simple_repeat Simple_repeat 1 179 0 6 654 378 208 98 20 chrU 9113599 9114298 -934739 + (TCTTG)n Simple_repeat Simple_repeat 1 753 0 6 654 307 239 0 80 chrU 9115498 9115598 -933439 - TOM_I LTR Gypsy -5456 656 565 6 654 22 56 0 0 chrU 9115780 9115816 -933221 + AT_rich Low_complexity Low_complexity 1 36 0 6 654 1477 0 0 0 chrU 9116735 9116896 -932141 - SSU-rRNA_Dme rRNA rRNA 0 1995 1835 6 654 6530 5 41 0 chrU 9116996 9118194 -930843 - DM1731_I LTR Copia -229 3747 2501 6 654 8925 41 27 20 chrU 9118294 9119491 -929546 - IDEFIX_I LTR Gypsy -2117 3511 2307 6 654 8544 20 29 3 chrU 9119591 9120622 -928415 + PROTOP_A DNA P 48 1105 0 6 654 1211 43 0 0 chrU 9120625 9120788 -928249 - PROTOP_A DNA P -688 417 255 6 654 4898 34 0 0 chrU 9122185 9122766 -926271 + MAX_I LTR Pao 4870 5450 -2464 6 654 4935 39 96 0 chrU 9122765 9123382 -925655 + MAX_I LTR Pao 5806 6481 -1433 6 654 4031 58 0 7 chrU 9123509 9124061 -924976 - MDG1_I LTR Gypsy -392 6204 5657 6 654 255 215 11 151 chrU 9124124 9124217 -924820 - DM176_LTR LTR Gypsy -238 269 190 6 654 2634 66 19 8 chrU 9124269 9124634 -924403 - MDG1_I LTR Gypsy -827 5769 5401 6 654 264 26 0 0 chrU 9124640 9124678 -924359 - DM297_I LTR Gypsy -1816 4351 4314 6 654 4323 206 21 29 chrU 9124778 9125972 -923065 + SAR_DM Satellite Satellite 1 1184 -203 6 654 1642 126 54 48 chrU 9126074 9126495 -922542 - TAHRE LINE telomeric -10063 400 6 6 654 1024 97 0 0 chrU 9126481 9126625 -922412 - HETA LINE telomeric -4572 1509 1366 6 654 3234 101 269 5 chrU 9126641 9127261 -921776 - TART LINE telomeric -3961 10516 9733 6 654 5824 35 10 2 chrU 9127368 9128563 -920474 - DMCR1A LINE CR1 -1984 2486 1236 6 654 4102 207 27 28 chrU 9128666 9129826 -919211 - SAR_DM Satellite Satellite -257 1215 57 6 654 829 276 20 13 chrU 9129560 9129858 -919179 + XDMR_DM Unknown Unknown 6 305 -55 6 654 1547 23 0 2 chrU 9129962 9130551 -918486 + (AATAG)n Simple_repeat Simple_repeat 1 587 0 6 654 25 95 0 0 chrU 9131031 9131105 -917932 + AT_rich Low_complexity Low_complexity 1 74 0 6 654 5139 3 2 2 chrU 9131253 9131863 -917174 + HMSBEAGLE_I LTR Gypsy 187 796 -5733 6 654 924 42 48 12 chrU 9131863 9132031 -917006 + (TTA)n Simple_repeat Simple_repeat 3 176 0 6 654 3619 0 0 7 chrU 9132031 9132448 -916589 + HMSBEAGLE_I LTR Gypsy 976 1389 -5140 6 654 10334 7 2 7 chrU 9132548 9133743 -915294 + DM176_I LTR Gypsy 2832 4021 -2399 6 654 1798 18 0 56 chrU 9133843 9134077 -914960 - ROO_I LTR Pao -8035 221 1 6 654 3391 25 49 0 chrU 9134077 9134485 -914552 - ROO_LTR LTR Pao 0 428 1 6 654 2409 36 114 3 chrU 9134485 9134842 -914195 + PROTOP DNA P 231 627 -3853 6 654 1371 47 21 5 chrU 9134841 9135033 -914004 + PROTOP DNA P 403 597 -3883 6 654 461 273 96 59 chrU 9135963 9136324 -912713 - QUASIMODO_I LTR Gypsy -4405 1558 1195 6 654 8221 35 40 1 chrU 9136430 9137526 -911511 - NINJA_I LTR Pao -2444 3567 2337 6 654 838 21 0 0 chrU 9137526 9137622 -911415 - NINJA_I LTR Pao -3878 2133 2038 6 654 359 311 62 62 chrU 9138359 9138876 -910161 + BLASTOPIA_I LTR Gypsy 2080 2596 -1885 6 654 5727 5 0 0 chrU 9139016 9139649 -909388 - DOC LINE Jockey -4089 636 4 6 654 4863 7 11 0 chrU 9139656 9140209 -908828 + Copia2_I LTR Copia 477 1035 -3127 6 654 8797 42 49 0 chrU 9140338 9141500 -907537 + IDEFIX_I LTR Gypsy 1 1303 -4325 6 654 261 75 434 0 chrU 9141846 9141899 -907138 + PROTOP_B DNA P 1 76 -1077 6 654 6357 93 50 6 chrU 9141889 9142795 -906242 + Gypsy12_I LTR Gypsy 2449 3394 -2152 6 654 448 139 29 10 chrU 9142895 9142997 -906040 + NTS_DM Other Other 102 205 -35 6 654 225 220 0 17 chrU 9143012 9143072 -905965 + T-rich Low_complexity Low_complexity 3 61 0 6 654 492 223 0 0 chrU 9143074 9143249 -905788 + (CTATT)n Simple_repeat Simple_repeat 2 176 0 6 654 305 161 18 0 chrU 9143293 9143349 -905688 + NTS_DM Other Other 1 57 -183 6 654 1173 133 29 21 chrU 9143423 9143661 -905376 + NTS_DM Other Other 1 240 0 6 654 305 161 18 0 chrU 9143661 9143717 -905320 + NTS_DM Other Other 1 57 -183 6 654 1079 153 15 5 chrU 9143791 9143994 -905043 + NTS_DM Other Other 1 205 -35 6 654 257 244 26 0 chrU 9144009 9144087 -904950 + (CTATT)n Simple_repeat Simple_repeat 3 82 0 6 654 3200 108 94 34 chrU 9144187 9144772 -904265 + Gypsy12_I LTR Gypsy 349 968 -4578 6 654 2630 92 57 13 chrU 9144770 9145156 -903881 + Gypsy12_I LTR Gypsy 1152 1554 -3992 6 654 1430 123 0 19 chrU 9145163 9145379 -903658 + Gypsy12_I LTR Gypsy 1503 1714 -3832 6 654 9482 33 16 15 chrU 9145481 9146671 -902366 - BATUMI_I LTR Pao -5408 2555 1365 6 654 3107 76 38 2 chrU 9146959 9147383 -901654 - DIVER2_I LTR Pao -3708 439 1 6 654 3308 31 0 0 chrU 9147383 9147768 -901269 - DIVER2_LTR LTR Pao 0 385 1 6 654 2847 241 3 3 chrU 9148062 9148674 -900363 - Gypsy6_I LTR Gypsy -3663 3349 2738 6 654 1599 299 7 26 chrU 9148679 9149253 -899784 - Gypsy6_I LTR Gypsy -4430 2582 2020 6 654 686 220 10 29 chrU 9149353 9149559 -899478 - HETA LINE telomeric -2425 3656 3455 6 654 6399 82 46 16 chrU 9149557 9150543 -898494 - HETA LINE telomeric -602 5479 4465 6 654 2650 0 0 0 chrU 9150643 9150938 -898099 + HMSBEAGLE_I LTR Gypsy 6235 6529 0 6 654 2421 8 0 0 chrU 9150938 9151204 -897833 + DMLTR5 LTR Gypsy 1 266 0 6 654 522 226 0 10 chrU 9151204 9151600 -897437 + (AATAG)n Simple_repeat Simple_repeat 1 391 0 6 654 1068 131 27 23 chrU 9151608 9151827 -897210 - NTS_DM Other Other -14 226 7 6 654 2491 170 189 10 chrU 9151933 9152866 -896171 - DM176_I LTR Gypsy -4869 1551 368 6 654 58 0 0 0 chrU 9152947 9153005 -896032 + AT_rich Low_complexity Low_complexity 1 58 0 6 654 225 29 88 0 chrU 9153089 9153123 -895914 - DMRT1A LINE R1 -465 4718 4682 6 654 4164 193 17 23 chrU 9153223 9154394 -894643 + SAR_DM Satellite Satellite 1 1163 -216 6 654 1927 286 5 3 chrU 9154515 9155102 -893935 - ROVER-I_DM LTR Gypsy -4949 1635 1048 6 654 2343 54 63 0 chrU 9155269 9155600 -893437 - LOOPER1_DM DNA PiggyBac -1529 352 1 6 654 46 0 0 0 chrU 9156108 9156154 -892883 + AT_rich Low_complexity Low_complexity 1 46 0 6 654 292 109 0 0 chrU 9156485 9156531 -892506 - MDG1_I LTR Gypsy -2 6594 6549 6 654 45 0 0 0 chrU 9156614 9156659 -892378 + AT_rich Low_complexity Low_complexity 1 45 0 6 654 779 235 10 14 chrU 9156701 9156990 -892047 - Gypsy11_I LTR Gypsy -140 3384 3097 6 654 2568 88 33 57 chrU 9157090 9157690 -891347 + DMSAT6 Satellite Satellite 1 586 -97 6 654 2532 100 9 23 chrU 9157717 9158279 -890758 + DMSAT6 Satellite Satellite 1 553 -3 6 654 1599 17 0 0 chrU 9158379 9158932 -890105 + (CATTA)n Simple_repeat Simple_repeat 1 553 0 6 654 1316 44 0 6 chrU 9158932 9159112 -889925 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 6 654 1477 34 0 11 chrU 9159123 9159568 -889469 + (TTATA)n Simple_repeat Simple_repeat 1 440 0 6 654 4383 23 27 0 chrU 9159668 9160182 -888855 - FW_DM LINE Jockey -4164 528 1 6 654 1814 65 0 8 chrU 9160190 9160424 -888613 + R1_DM LINE R1 1377 1608 -3748 6 654 2788 51 3 3 chrU 9160418 9160769 -888268 + R1_DM LINE R1 1081 1431 -3925 6 654 629 69 0 0 chrU 9160770 9160857 -888180 + R1_DM LINE R1 1542 1628 -3728 6 654 262 61 0 0 chrU 9160958 9160991 -888046 - R1_DM LINE R1 -3047 2309 2277 6 654 459 36 0 0 chrU 9160991 9161046 -887991 + CIRCE LINE Composite 4931 4985 -1371 6 654 3342 29 26 43 chrU 9161399 9161860 -887177 + CIRCE LINE Composite 4981 5427 -929 6 654 1730 29 5 0 chrU 9161941 9162145 -886892 + CIRCE LINE Composite 5428 5632 -724 6 654 1839 0 0 0 chrU 9162245 9162475 -886562 - DM176_I LTR Gypsy -5028 1392 1163 6 654 511 30 60 0 chrU 9162477 9162544 -886493 - DM176_LTR LTR Gypsy -186 321 251 6 654 2289 11 0 78 chrU 9162545 9162852 -886185 - DM176_LTR LTR Gypsy -224 283 1 6 654 4488 43 5 0 chrU 9162871 9163431 -885606 + ROO_I LTR Pao 5528 6090 -2166 6 654 1826 33 12 0 chrU 9163531 9163773 -885264 + PROTOP_B DNA P 185 429 -724 6 654 4475 106 48 93 chrU 9163768 9164717 -884320 + PROTOP_B DNA P 208 1114 -39 6 654 5542 12 6 14 chrU 9164817 9165467 -883570 - DOC LINE Jockey -4049 676 32 6 654 4404 18 0 2 chrU 9165494 9166003 -883034 - R1_DM LINE R1 -2922 2434 1927 6 654 4007 186 70 19 chrU 9166106 9167195 -881842 - HETA LINE telomeric -1618 4463 3455 6 654 414 185 21 21 chrU 9167193 9167287 -881750 - HETA LINE telomeric -602 5479 5386 6 654 5294 16 8 2 chrU 9167389 9168002 -881035 + R1_DM LINE R1 3989 4605 -751 6 654 4996 27 27 0 chrU 9167985 9168575 -880462 + R1_DM LINE R1 2816 3421 -1935 6 654 819 11 0 0 chrU 9168675 9168767 -880270 + ACCORD_I LTR Gypsy 6197 6288 0 6 654 5147 0 0 0 chrU 9168767 9169325 -879712 + ACCORD_LTR LTR Gypsy 1 558 0 6 654 4501 43 21 0 chrU 9169325 9169859 -879178 - BATUMI_I LTR Pao -3816 4147 3603 6 654 1620 3 3 79 chrU 9169960 9171118 -877919 + (CAAGA)n Simple_repeat Simple_repeat 1 1069 0 6 654 2724 161 8 6 chrU 9171246 9171758 -877279 + SAR_DM Satellite Satellite 346 858 -614 6 654 2653 194 28 22 chrU 9171778 9172421 -876616 + SAR_DM Satellite Satellite 472 1118 -354 6 654 329 162 12 36 chrU 9172347 9172430 -876607 - XDMR_DM Unknown Unknown -12 348 268 6 654 2339 306 83 24 chrU 9172532 9173639 -875398 - NOMAD_I LTR Gypsy -3367 3205 2034 6 654 9046 44 20 18 chrU 9173815 9175000 -874037 + IDEFIX_I LTR Gypsy 2860 4047 -1581 6 655 9384 34 10 29 chrU 9175100 9176285 -872752 + MAX_I LTR Pao 6510 7672 -242 6 655 9676 51 1 2 chrU 9176385 9177570 -871467 - STALKER4_I LTR Gypsy -1232 5298 4116 6 655 2421 11 0 0 chrU 9178409 9178685 -870352 + Copia_LTR LTR Copia 1 276 0 6 655 251 0 0 0 chrU 9178685 9178719 -870318 + Copia_LTR LTR Copia 243 276 0 6 655 1111 8 0 22 chrU 9178719 9178854 -870183 + Copia_I LTR Copia 1 132 -4461 6 655 4600 202 21 26 chrU 9178968 9180134 -868903 + SAR_DM Satellite Satellite 57 1217 -255 6 655 5253 13 3 3 chrU 9180238 9180839 -868198 + R1_DM LINE R1 3755 4355 -1001 6 655 3847 22 104 2 chrU 9180836 9181422 -867615 + R1_DM LINE R1 1974 2619 -2737 6 655 233 138 241 0 chrU 9181555 9181613 -867424 + IDEFIX_I LTR Gypsy 4028 4099 -1529 6 655 2134 175 3 3 chrU 9181613 9181992 -867045 + IDEFIX_I LTR Gypsy 4344 4722 -906 6 655 1244 108 41 41 chrU 9182043 9182264 -866773 + IDEFIX_LTR LTR Gypsy 1 221 -373 6 655 27 0 0 0 chrU 9182441 9182468 -866569 + AT_rich Low_complexity Low_complexity 1 27 0 6 655 824 141 42 0 chrU 9182564 9182706 -866331 + IDEFIX_I LTR Gypsy 1789 1936 -3692 6 655 1178 77 18 0 chrU 9182808 9182976 -866061 - G2_DM LINE Jockey -7 3095 2925 6 655 1150 61 0 13 chrU 9182951 9183100 -865937 - G2_DM LINE Jockey -2227 875 729 6 655 4872 50 19 18 chrU 9183361 9183990 -865047 + LSU-rRNA_Dme rRNA rRNA 2599 3228 -672 6 655 261 32 0 0 chrU 9184090 9184121 -864916 + R1_DM LINE R1 5326 5356 0 6 655 8655 51 53 3 chrU 9184155 9185274 -863763 + R1_DM LINE R1 1 1175 -4181 6 655 10638 2 2 1 chrU 9185374 9186557 -862480 + R1_DM LINE R1 2848 4031 -1325 6 655 919 135 7 7 chrU 9186658 9186807 -862230 + Gypsy12A_LTR LTR Gypsy 2114 2262 -18 6 655 822 189 186 82 chrU 9186797 9187233 -861804 + TART LINE telomeric 10015 10491 -3986 6 655 3241 78 35 35 chrU 9187351 9187839 -861198 + PROTOP DNA P 1 488 -3992 6 655 10490 14 11 11 chrU 9187939 9189121 -859916 - Gypsy6_I LTR Gypsy -1030 5982 4801 6 655 9917 28 1 9 chrU 9189221 9190402 -858635 + ROO_I LTR Pao 1329 2499 -5757 6 655 1407 64 0 0 chrU 9190502 9190674 -858363 - G5_DM LINE Jockey -4287 569 398 6 655 1304 97 0 11 chrU 9190665 9190843 -858194 - G5_DM LINE Jockey -4675 181 6 6 655 698 208 34 14 chrU 9191320 9191466 -857571 + NOMAD_I LTR Gypsy 547 695 -5877 6 655 210 193 0 0 chrU 9191494 9191551 -857486 + A-rich Low_complexity Low_complexity 1 57 0 6 655 1233 206 79 50 chrU 9192197 9192616 -856421 + Gypsy_LTR LTR Gypsy 1 431 -51 6 655 626 73 0 0 chrU 9192747 9192829 -856208 + Jockey2 LINE Jockey 1 82 -3346 6 655 570 162 42 25 chrU 9192833 9192953 -856084 + Gypsy5_LTR LTR Gypsy 77 198 -232 6 655 2243 114 51 37 chrU 9193066 9193504 -855533 - TART LINE telomeric -10448 4029 3656 6 655 1064 107 0 6 chrU 9193494 9193654 -855383 - TART LINE telomeric -10708 3769 3611 6 655 3730 84 143 8 chrU 9193656 9194245 -854792 - TART LINE telomeric -6450 8027 7360 6 655 3163 0 0 3 chrU 9194345 9194700 -854337 - QUASIMODO_LTR LTR Gypsy -304 354 1 6 655 6847 7 10 0 chrU 9194700 9195525 -853512 - QUASIMODO_I LTR Gypsy 0 6060 5228 6 655 9968 9 0 26 chrU 9195626 9196804 -852233 - MDG3_I LTR Gypsy -2661 2325 1179 6 655 10193 15 0 14 chrU 9196904 9198083 -850954 - STALKER4_I LTR Gypsy -2584 3946 2784 6 655 5872 32 55 3 chrU 9198183 9199362 -849675 - BATUMI_I LTR Pao -2149 5814 4574 6 655 26 30 0 0 chrU 9199478 9199511 -849526 + AT_rich Low_complexity Low_complexity 1 33 0 6 655 3861 77 40 38 chrU 9199887 9200641 -848396 - PROTOP_A DNA P 0 1153 464 6 655 10272 19 27 1 chrU 9200741 9201919 -847118 - FW_DM LINE Jockey -305 4387 3179 6 655 2287 8 4 0 chrU 9202019 9202281 -846756 + HETA LINE telomeric 5819 6081 0 6 655 2855 129 13 11 chrU 9202281 9202744 -846293 + TAHRE LINE telomeric 9980 10443 -20 6 655 1745 159 35 42 chrU 9202761 9203195 -845842 + HETA LINE telomeric 115 545 -5536 6 655 806 0 0 0 chrU 9203297 9203386 -845651 - NOMAD_I LTR Gypsy -6483 89 1 6 655 4800 0 0 0 chrU 9203386 9203904 -845133 - NOMAD_LTR LTR Gypsy 0 518 1 6 655 1923 52 0 0 chrU 9203904 9204137 -844900 + DM1731_LTR LTR Copia 104 336 0 6 655 3030 3 3 3 chrU 9204137 9204475 -844562 + DM1731_I LTR Copia 1 338 -3638 6 655 731 11 11 0 chrU 9204575 9204662 -844375 + ROO_LTR LTR Pao 341 428 0 6 655 6498 41 157 51 chrU 9204662 9205255 -843782 + ROO_I LTR Pao 1 640 -7616 6 655 372 138 0 0 chrU 9205255 9205320 -843717 + (CAG)n Simple_repeat Simple_repeat 1 65 0 6 655 6498 41 157 51 chrU 9205320 9205753 -843284 + ROO_I LTR Pao 641 1135 -7121 6 655 8747 45 1 7 chrU 9205853 9206936 -842101 + G2_DM LINE Jockey 1453 2528 -574 6 655 723 32 0 0 chrU 9206937 9207031 -842006 - G2_DM LINE Jockey -11 3091 2998 6 655 695 39 0 10 chrU 9207131 9207234 -841803 + FW_DM LINE Jockey 4591 4692 0 6 655 268 29 0 0 chrU 9207241 9207275 -841762 - R1_DM LINE R1 -3966 1390 1357 6 655 8092 48 34 3 chrU 9207275 9208307 -840730 - R1_DM LINE R1 -4150 1206 143 6 655 700 69 10 10 chrU 9208409 9208511 -840526 + ARS406_DM Unknown Unknown 88 189 -164 6 655 4165 205 43 29 chrU 9208429 9209580 -839457 - SAR_DM Satellite Satellite -225 1247 81 6 655 4063 86 8 8 chrU 9209687 9210274 -838763 - IDEFIX_I LTR Gypsy -1661 3967 3381 6 655 4436 53 138 0 chrU 9210256 9210863 -838174 - IDEFIX_I LTR Gypsy -3272 2356 1666 6 655 1413 249 104 50 chrU 9210972 9211799 -837238 - Gypsy12_LTR LTR Gypsy -1464 872 1 6 655 2734 71 0 3 chrU 9211799 9212140 -836897 - Gypsy12_I LTR Gypsy 0 5546 5207 6 655 7584 20 58 0 chrU 9212240 9213415 -835622 + R1_DM LINE R1 3969 5211 -145 6 655 5643 2 0 2 chrU 9213515 9214138 -834899 - FW_DM LINE Jockey -1194 3498 2877 6 655 4907 4 0 20 chrU 9214136 9214690 -834347 - FW_DM LINE Jockey -2000 2692 2150 6 655 1003 80 0 0 chrU 9214790 9214928 -834109 - ARS406_DM Unknown Unknown -215 138 1 6 655 3945 180 44 28 chrU 9214928 9215964 -833073 + SAR_DM Satellite Satellite 1 1192 -416 6 655 1292 309 49 29 chrU 9216139 9216873 -832164 + Copia_I LTR Copia 156 904 -3689 6 655 751 235 0 0 chrU 9217053 9217236 -831801 + Copia_I LTR Copia 1653 1835 -2758 6 655 4550 121 51 4 chrU 9217338 9218043 -830994 - IDEFIX_I LTR Gypsy -2449 3179 2442 6 655 2673 127 42 21 chrU 9218077 9218511 -830526 - IDEFIX_I LTR Gypsy -4127 1501 1059 6 655 5334 10 26 0 chrU 9218611 9219784 -829253 - DM176_I LTR Gypsy -1573 4847 3645 6 655 5058 49 0 6 chrU 9219884 9220536 -828501 + IDEFIX_I LTR Gypsy 3347 3994 -1634 6 655 4281 29 4 2 chrU 9220538 9221057 -827980 + IDEFIX_I LTR Gypsy 4508 5027 -601 6 655 4043 30 4 0 chrU 9221157 9221631 -827406 + R1_DM LINE R1 4591 5066 -290 6 655 957 53 0 0 chrU 9221628 9221742 -827295 + R1_DM LINE R1 5243 5356 0 6 655 545 75 75 0 chrU 9221775 9221855 -827182 + R1_DM LINE R1 1 86 -5270 6 655 3508 36 22 2 chrU 9221885 9222330 -826707 + R1_DM LINE R1 638 1091 -4265 6 655 7330 40 11 0 chrU 9222430 9223299 -825738 - MAX_I LTR Pao -4756 3158 2280 6 655 526 0 0 0 chrU 9223299 9223356 -825681 - MAX_I LTR Pao -6505 1409 1353 6 655 281 79 0 0 chrU 9223401 9223439 -825598 - MAX_I LTR Pao -6660 1254 1217 6 655 594 57 125 0 chrU 9223423 9223511 -825526 - MAX_I LTR Pao -6560 1354 1256 6 655 5515 13 0 0 chrU 9223703 9224315 -824722 - HETA LINE telomeric -3320 2761 2150 6 655 2774 177 12 10 chrU 9224317 9224835 -824202 - TAHRE LINE telomeric -14 10449 9931 6 655 1641 14 0 5 chrU 9224976 9225188 -823849 + BLOOD_I LTR Gypsy 6403 6613 0 6 655 3747 2 0 0 chrU 9225188 9225587 -823450 + BLOOD_LTR LTR Gypsy 1 399 0 6 655 3208 125 162 16 chrU 9225587 9226147 -822890 - Gypsy_I LTR Gypsy -1543 4964 4323 6 655 8038 102 44 8 chrU 9227519 9228689 -820348 + Gypsy12_I LTR Gypsy 3880 5091 -455 6 655 4429 52 96 36 chrU 9229108 9229745 -819292 + DIVER2_I LTR Pao 901 1575 -2572 6 655 1942 23 0 0 chrU 9229743 9229960 -819077 + DIVER2_I LTR Pao 3743 3959 -188 6 655 10656 0 1 0 chrU 9230060 9231230 -817807 - ROO_I LTR Pao -3715 4541 3371 6 655 23 68 0 0 chrU 9231346 9231390 -817647 + AT_rich Low_complexity Low_complexity 1 44 0 6 655 26 30 0 0 chrU 9231436 9231469 -817568 + AT_rich Low_complexity Low_complexity 1 33 0 6 655 3810 71 46 25 chrU 9231846 9232500 -816537 - PROTOP_A DNA P 0 1153 534 6 655 7925 105 37 13 chrU 9232604 9233769 -815268 + Gypsy12_I LTR Gypsy 1918 3110 -2436 6 655 888 154 28 165 chrU 9234399 9234648 -814389 + ACCORD2_LTR LTR Gypsy 1 215 0 6 655 1435 75 0 5 chrU 9234850 9235038 -813999 + PROTOP DNA P 2616 2802 -1678 6 655 5028 8 0 5 chrU 9235138 9235730 -813307 + STALKER4_I LTR Gypsy 5723 6311 -219 6 655 21 0 0 0 chrU 9235730 9235751 -813286 + AT_rich Low_complexity Low_complexity 1 21 0 6 655 2251 120 18 22 chrU 9235751 9236306 -812731 - DMSAT6 Satellite Satellite -5 552 1 6 655 2677 76 0 88 chrU 9236408 9236841 -812196 - DMHMR2 Unknown Unknown -665 547 153 6 655 312 207 47 35 chrU 9236838 9236923 -812114 - TAHRE LINE telomeric -9421 1042 957 6 655 2178 200 103 40 chrU 9236926 9237519 -811518 - TAHRE LINE telomeric -9624 839 210 6 655 1271 109 0 10 chrU 9237674 9237868 -811169 - STALKER4_I LTR Gypsy -4278 2252 2061 6 655 3405 157 43 3 chrU 9237870 9238501 -810536 - STALKER4_I LTR Gypsy -4599 1931 1276 6 655 1458 121 52 123 chrU 9238492 9238841 -810196 - STALKER4_I LTR Gypsy -5649 881 558 6 655 6979 42 0 4 chrU 9239267 9240108 -808929 + G2_DM LINE Jockey 1411 2248 -854 6 655 1894 139 144 186 chrU 9240253 9241144 -807893 + MAX_I LTR Pao 557 1409 -6505 6 655 1978 43 0 0 chrU 9241144 9241375 -807662 + MAX_I LTR Pao 2280 2510 -5404 6 655 10006 23 17 3 chrU 9241478 9242641 -806396 + Invader3_I LTR Gypsy 3015 4194 -694 6 655 22 56 0 0 chrU 9242923 9242959 -806078 + AT_rich Low_complexity Low_complexity 1 36 0 6 655 331 333 40 66 chrU 9243302 9243712 -805325 + Gypsy6_I LTR Gypsy 1438 1784 -5228 6 655 1894 238 92 55 chrU 9244007 9245164 -803873 - Gypsy12_LTR LTR Gypsy -983 1353 105 6 655 5756 82 68 27 chrU 9245273 9246264 -802773 + TART_B1 LINE telomeric 3107 4185 -6469 6 655 1420 63 0 0 chrU 9246264 9246439 -802598 + TART LINE telomeric 1452 1626 -12851 6 655 233 238 36 36 chrU 9246539 9246622 -802415 - MDG3_I LTR Gypsy -1641 3345 3263 6 655 2725 85 82 11 chrU 9247805 9248970 -800067 - DMSAT6 Satellite Satellite -83 1247 1 6 655 4458 171 15 39 chrU 9249249 9250203 -798834 - Gypsy9_I LTR Gypsy -4252 2036 1103 6 655 4412 2 0 0 chrU 9250335 9250844 -798193 - DOC6_DM LINE Jockey -81 4141 3633 6 655 1569 72 61 49 chrU 9250840 9251125 -797912 - MAX_I LTR Pao -7406 508 178 6 655 3148 38 0 0 chrU 9251131 9251500 -797537 - MAX_I LTR Pao -2104 5810 5442 6 655 247 65 0 0 chrU 9251600 9251631 -797406 - ARS406_DM Unknown Unknown -322 31 1 6 655 4283 184 12 17 chrU 9251604 9252763 -796274 + SAR_DM Satellite Satellite 1 1152 -678 6 655 445 100 0 0 chrU 9252864 9252924 -796113 + TART LINE telomeric 1800 1859 -12618 6 655 7848 66 52 10 chrU 9252915 9254026 -795011 + TART LINE telomeric 2045 3202 -11275 6 655 4104 207 25 32 chrU 9254128 9255290 -793747 - SAR_DM Satellite Satellite -318 1153 1 6 655 2588 0 0 10 chrU 9255390 9255686 -793351 + BATUMI_I LTR Pao 7671 7963 0 6 655 2073 38 3 89 chrU 9255686 9255998 -793039 + BATUMI_I LTR Pao 7002 7286 -677 6 655 194 0 0 37 chrU 9256054 9256081 -792956 + (TAA)n Simple_repeat Simple_repeat 2 27 0 6 655 335 284 140 30 chrU 9256317 9256553 -792484 + TOM_I LTR Gypsy 1310 1571 -4541 6 655 1419 19 0 0 chrU 9256653 9256810 -792227 - Invader2_LTR LTR Gypsy -109 157 1 6 655 1933 48 70 0 chrU 9256810 9257108 -791929 - PROTOP_A DNA P -240 865 570 6 655 3050 108 59 29 chrU 9257113 9257816 -791221 - TART_B1 LINE telomeric -9287 1367 735 6 655 4851 9 0 0 chrU 9257916 9258458 -790579 - DMRT1B LINE R1 -147 5036 4495 6 655 5431 11 32 0 chrU 9258452 9259077 -789960 - DMRT1B LINE R1 -841 4342 3698 6 655 3044 11 8 0 chrU 9259180 9259533 -789504 + Copia2_I LTR Copia 3807 4162 0 6 655 717 45 0 0 chrU 9259533 9259621 -789416 + Copia2_LTR_DM LTR Copia 1 88 -110 6 655 1565 15 0 7 chrU 9259637 9259907 -789130 + (TTATA)n Simple_repeat Simple_repeat 1 268 0 6 655 31 0 0 0 chrU 9259907 9259938 -789099 + AT_rich Low_complexity Low_complexity 1 31 0 6 655 3169 132 4 12 chrU 9260442 9260955 -788082 + TAHRE LINE telomeric 9941 10449 -14 6 655 3872 144 15 5 chrU 9260953 9261604 -787433 + HETA LINE telomeric 1450 2107 -3974 6 655 4488 129 75 48 chrU 9261709 9262384 -786653 - TART LINE telomeric -4242 10235 9559 6 655 198 0 0 0 chrU 9262384 9262406 -786631 + (CATTT)n Simple_repeat Simple_repeat 3 24 0 6 655 4488 129 75 48 chrU 9262406 9262645 -786392 - TART LINE telomeric -4919 9558 9296 6 655 1158 199 4 4 chrU 9262633 9262865 -786172 - TAHRE LINE telomeric -350 10113 9882 6 655 229 94 0 0 chrU 9262967 9262999 -786038 + Gypsy12_I LTR Gypsy 1523 1554 -3992 6 655 2339 110 0 12 chrU 9263006 9263329 -785708 + Gypsy12_I LTR Gypsy 1503 1821 -3725 6 655 3558 79 177 12 chrU 9263326 9264128 -784909 + Gypsy12_I LTR Gypsy 4465 5398 -148 6 655 2164 115 59 57 chrU 9264377 9264783 -784254 - Gypsy6_LTR LTR Gypsy 0 407 1 6 655 39 50 0 0 chrU 9264898 9264958 -784079 + AT_rich Low_complexity Low_complexity 1 60 0 6 655 8971 51 48 3 chrU 9265490 9266651 -782386 - R1_DM LINE R1 -3972 1384 171 6 655 4704 99 41 0 chrU 9266751 9267407 -781630 - Gypsy12_I LTR Gypsy -2488 3058 2376 6 655 3419 114 0 40 chrU 9267382 9267912 -781125 - Gypsy12_I LTR Gypsy -1637 3909 3401 6 655 5778 28 0 0 chrU 9268013 9268681 -780356 + IDEFIX_I LTR Gypsy 2032 2699 -2929 6 655 3733 35 66 8 chrU 9268675 9269172 -779865 + IDEFIX_I LTR Gypsy 2892 3417 -2211 6 655 399 0 21 0 chrU 9269273 9269320 -779717 + TART LINE telomeric 10617 10664 -3813 6 655 5016 138 27 36 chrU 9269328 9270434 -778603 + TART LINE telomeric 8869 9822 -4655 6 655 5232 10 3 0 chrU 9270534 9271121 -777916 + QUASIMODO_I LTR Gypsy 1892 2480 -3580 6 655 3658 35 0 119 chrU 9271115 9271695 -777342 + NINJA_I LTR Pao 101 611 -5400 6 655 2922 12 0 0 chrU 9271795 9272119 -776918 + NOMAD_LTR LTR Gypsy 195 518 0 6 655 1770 48 83 0 chrU 9272126 9272355 -776682 - PROTOP DNA P -4232 248 1 6 655 3272 227 57 64 chrU 9273056 9275448 -773589 + SAR_DM Satellite Satellite 1 2375 -656 6 655 3534 39 0 5 chrU 9275577 9275992 -773045 + MAX_I LTR Pao 3558 3970 -3944 6 655 6308 37 9 7 chrU 9275980 9276737 -772300 + MAX_I LTR Pao 4236 4994 -2920 6 655 1783 96 110 26 chrU 9276837 9277146 -771891 - BATUMI_I LTR Pao -7628 335 1 6 655 2031 39 3 93 chrU 9277146 9277459 -771578 - BATUMI_I LTR Pao -679 7284 7000 6 655 424 226 22 108 chrU 9277537 9277676 -771361 - Gypsy12_LTR LTR Gypsy -1808 528 402 6 655 903 136 141 42 chrU 9277679 9277871 -771166 - Gypsy12_LTR LTR Gypsy -2125 211 1 6 655 816 38 276 0 chrU 9277870 9277997 -771040 - Gypsy12_I LTR Gypsy 0 5546 5385 6 655 5727 6 39 2 chrU 9278097 9279257 -769780 - DM1731_I LTR Copia -1134 2842 1640 6 655 866 122 10 16 chrU 9279357 9279862 -769175 + RSP Satellite Satellite 1 502 0 6 655 461 0 0 0 chrU 9279862 9279912 -769125 + ROO_LTR LTR Pao 1 50 -378 6 655 2795 51 5 22 chrU 9279872 9280245 -768792 + G5_DM LINE Jockey 4529 4856 0 6 655 716 98 7 19 chrU 9280249 9280514 -768523 - RSP Satellite Satellite -13 262 1 6 655 4789 13 53 1 chrU 9280617 9281548 -767489 + STALKER4_I LTR Gypsy 5552 6530 0 6 655 1952 26 0 4 chrU 9281548 9281776 -767261 + STALKER4_LTR LTR Gypsy 1 227 -175 6 655 3879 197 33 34 chrU 9281877 9283033 -766004 + SAR_DM Satellite Satellite 1 1154 -203 6 655 4342 114 74 73 chrU 9283388 9284294 -764743 - PROTOP_B DNA P 0 1153 247 6 655 8958 55 16 9 chrU 9284394 9285553 -763484 - R1_DM LINE R1 -4140 1216 49 6 655 5222 0 0 0 chrU 9285653 9286209 -762828 + MAX_I LTR Pao 3691 4246 -3668 6 655 5498 2 0 2 chrU 9286208 9286812 -762225 + MAX_I LTR Pao 4825 5427 -2487 6 655 731 56 19 0 chrU 9286912 9287020 -762017 + (TTATA)n Simple_repeat Simple_repeat 2 111 0 6 655 4383 4 45 0 chrU 9287043 9287551 -761486 - IDEFIX_LTR LTR Gypsy 0 594 64 6 655 1046 151 33 102 chrU 9287552 9287796 -761241 - DMLTR5 LTR Gypsy 0 266 40 6 655 790 135 0 16 chrU 9287884 9288012 -761025 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 6 655 2689 6 169 0 chrU 9288170 9288367 -760670 - TART LINE telomeric -6495 7982 7786 6 655 447 35 0 0 chrU 9288367 9288424 -760613 + (CTTTA)n Simple_repeat Simple_repeat 3 59 0 6 655 2689 6 169 0 chrU 9288424 9288558 -760479 - TART LINE telomeric -6692 7785 7596 6 655 6207 3 82 0 chrU 9288557 9288808 -760229 - TART LINE telomeric -6441 8036 7786 6 655 447 35 0 0 chrU 9288808 9288865 -760172 + (CTTTA)n Simple_repeat Simple_repeat 3 59 0 6 655 6207 3 82 0 chrU 9288865 9289328 -759709 - TART LINE telomeric -6692 7785 7264 6 655 4924 23 0 0 chrU 9289428 9289988 -759049 - R1_DM LINE R1 -2614 2742 2183 6 655 2577 35 65 5 chrU 9289986 9290586 -758451 - R1_DM LINE R1 -3705 1651 919 6 655 3464 5 0 0 chrU 9290686 9291066 -757971 - Copia_I LTR Copia -4213 380 1 6 655 2401 7 0 4 chrU 9291066 9291343 -757694 - Copia_LTR LTR Copia 0 276 1 6 655 4544 4 0 0 chrU 9291343 9291843 -757194 + STALKER4_I LTR Gypsy 4535 5034 -1496 6 655 256 28 0 0 chrU 9291943 9291979 -757058 + DM297_I LTR Gypsy 4316 4351 -1816 6 655 2715 66 19 8 chrU 9291985 9292350 -756687 + MDG1_I LTR Gypsy 5401 5769 -827 6 655 267 215 11 151 chrU 9292402 9292495 -756542 + DM176_LTR LTR Gypsy 190 269 -238 6 655 3805 65 78 2 chrU 9292578 9293100 -755937 + DM297_I LTR Gypsy 2766 3327 -2840 6 655 2539 176 15 9 chrU 9295065 9295614 -753423 - SAR_DM Satellite Satellite -511 961 410 6 655 8309 25 4 0 chrU 9295714 9296681 -752356 - FW_DM LINE Jockey -1122 3570 2600 6 655 1616 26 11 0 chrU 9296680 9296871 -752166 - FW_DM LINE Jockey -2499 2193 2001 6 655 1614 74 0 5 chrU 9296976 9297193 -751844 - MAX_LTR LTR Pao -105 216 1 6 655 6957 39 12 36 chrU 9297201 9298127 -750910 - MAX_I LTR Pao -2 7912 7009 6 655 2728 95 16 23 chrU 9298227 9299383 -749654 - DMSAT6 Satellite Satellite -30 1148 1 6 655 2258 299 23 9 chrU 9299493 9300365 -748672 + ROVER-I_DM LTR Gypsy 736 1619 -4965 6 655 1407 212 0 4 chrU 9300362 9300637 -748400 + ROVER-I_DM LTR Gypsy 2145 2418 -4166 6 655 5147 0 0 0 chrU 9300747 9301305 -747732 - ACCORD_LTR LTR Gypsy 0 558 1 6 655 2020 185 13 16 chrU 9301324 9301895 -747142 + BATUMI_I LTR Pao 4224 4749 -3165 6 655 6417 85 46 64 chrU 9301995 9303085 -745952 + PROTOP_B DNA P 84 1153 0 6 655 4101 0 0 10 chrU 9303250 9303823 -745214 + G2_DM LINE Jockey 309 941 -2161 6 655 374 178 50 101 chrU 9303935 9304054 -744983 - Copia_I LTR Copia -80 4513 4401 6 655 22 56 0 0 chrU 9304099 9304135 -744902 + AT_rich Low_complexity Low_complexity 1 36 0 6 655 4958 6 0 0 chrU 9304505 9305044 -743993 + QUASIMODO_LTR LTR Gypsy 120 658 0 6 655 420 160 65 77 chrU 9305044 9305212 -743825 + BATUMI_I LTR Pao 604 769 -7194 6 655 1825 138 12 65 chrU 9305253 9305655 -743382 + BATUMI_I LTR Pao 749 1129 -6834 6 81 4437 73 142 5 chrU 9305762 9306901 -742136 + IDEFIX_I LTR Gypsy 3391 4685 -943 6 656 6419 8 41 3 chrU 9307015 9307753 -741284 + DOC LINE Jockey 3955 4720 -5 6 656 2146 157 19 7 chrU 9307751 9308167 -740870 - SAR_DM Satellite Satellite -720 752 332 6 656 2423 35 0 0 chrU 9308270 9308560 -740477 + MAX_I LTR Pao 7624 7913 -1 6 656 1826 123 70 0 chrU 9308563 9308863 -740174 + MAX_LTR LTR Pao 1 321 0 6 656 699 104 13 94 chrU 9308863 9309041 -739996 - Gypsy12_I LTR Gypsy -4819 727 508 6 656 1249 99 43 52 chrU 9309147 9309424 -739613 - Gypsy12_I LTR Gypsy -4818 728 402 6 656 5485 7 76 4 chrU 9309524 9310678 -738359 - MICROPIA_I LTR Gypsy -763 3713 2477 6 656 6452 11 16 0 chrU 9310778 9311505 -737532 + DMRT1B LINE R1 4445 5183 0 6 656 21 0 0 0 chrU 9311533 9311554 -737483 + AT_rich Low_complexity Low_complexity 1 21 0 6 656 2702 15 0 6 chrU 9311605 9311932 -737105 - IDEFIX_I LTR Gypsy -47 5581 5257 6 656 6558 58 28 1 chrU 9312032 9313185 -735852 + STALKER4_I LTR Gypsy 1550 2814 -3716 6 656 764 298 56 86 chrU 9313286 9313880 -735157 + HMSBEAGLE_I LTR Gypsy 1857 2432 -4097 6 656 8338 42 79 1 chrU 9314541 9315693 -733344 + R1_DM LINE R1 606 1847 -3509 6 656 412 235 25 86 chrU 9316642 9316805 -732232 - HMSBEAGLE_I LTR Gypsy -6153 376 224 6 656 5506 3 2 2 chrU 9317046 9317661 -731376 - FW_DM LINE Jockey -4026 666 52 6 656 841 224 166 23 chrU 9317659 9317961 -731076 + XDMR_DM Unknown Unknown 9 353 -7 6 656 2364 162 13 15 chrU 9317729 9318198 -730839 - SAR_DM Satellite Satellite -550 922 455 6 656 2428 39 21 3 chrU 9318299 9318634 -730403 + MDG1_I LTR Gypsy 5956 6296 -300 6 656 276 43 0 0 chrU 9318634 9318680 -730357 + MDG1_I LTR Gypsy 6475 6520 -76 6 656 1922 37 4 54 chrU 9318682 9318941 -730096 + MDG3_LTR LTR Gypsy 1 246 -21 6 656 4598 10 0 0 chrU 9318938 9319451 -729586 + MDG3_I LTR Gypsy 73 585 -4401 6 656 4898 101 83 4 chrU 9319553 9320703 -728334 + Gypsy12_I LTR Gypsy 2357 3596 -1950 6 656 2789 89 0 0 chrU 9320803 9321162 -727875 + HMSBEAGLE_I LTR Gypsy 1461 1819 -4710 6 656 3563 220 5 45 chrU 9321152 9321955 -727082 + HMSBEAGLE_I LTR Gypsy 2346 3116 -3413 6 656 1592 0 0 0 chrU 9322055 9322225 -726812 - MAX_I LTR Pao -7744 170 1 6 656 2891 6 0 0 chrU 9322225 9322542 -726495 - MAX_LTR LTR Pao 0 321 5 6 656 1620 11 0 1 chrU 9322542 9323205 -725832 + (TATAA)n Simple_repeat Simple_repeat 1 662 0 6 656 21 89 0 0 chrU 9323570 9323626 -725411 + AT_rich Low_complexity Low_complexity 1 56 0 6 656 23 68 0 0 chrU 9323664 9323708 -725329 + AT_rich Low_complexity Low_complexity 1 44 0 6 656 26 30 0 0 chrU 9323754 9323787 -725250 + AT_rich Low_complexity Low_complexity 1 33 0 6 656 2478 41 3 0 chrU 9324164 9324458 -724579 - PROTOP DNA P 0 4480 4186 6 656 348 211 105 0 chrU 9324845 9324940 -724097 - ROVER-I_DM LTR Gypsy -6479 105 1 6 656 2149 80 52 41 chrU 9324940 9325303 -723734 - ROVER-LTR_DM LTR Gypsy 0 367 1 6 656 3439 17 34 10 chrU 9325303 9325709 -723328 - CIRCE LINE Composite -1983 4373 3958 6 656 808 323 71 59 chrU 9325809 9326958 -722079 + Copia2_I LTR Copia 1637 2799 -1363 6 656 261 258 22 33 chrU 9328311 9328403 -720634 - BLASTOPIA_I LTR Gypsy -3644 837 747 6 656 1459 141 14 72 chrU 9329094 9329385 -719652 + ZAM_LTR LTR Gypsy 199 472 0 6 656 512 50 0 0 chrU 9329385 9329445 -719592 + ZAM_I LTR Gypsy 1 60 -7430 6 656 10000 7 15 29 chrU 9329559 9330709 -718328 + MICROPIA_I LTR Gypsy 1379 2512 -1964 6 656 21 89 0 0 chrU 9330913 9330969 -718068 + AT_rich Low_complexity Low_complexity 1 56 0 6 656 1212 7 176 0 chrU 9330988 9331136 -717901 - SSU-rRNA_Dme rRNA rRNA 0 1995 1822 6 656 3246 11 0 0 chrU 9331136 9331489 -717548 + Gypsy2_LTR LTR Gypsy 1 353 0 6 656 3649 25 0 49 chrU 9331489 9331957 -717080 + Gypsy2_I LTR Gypsy 1 445 -5690 6 656 4938 2 0 0 chrU 9332057 9332594 -716443 - FW_DM LINE Jockey -4155 537 1 6 656 2785 93 80 7 chrU 9332604 9333058 -715979 - TRANSIB2 DNA Transib -174 2670 1810 6 656 3568 9 86 0 chrU 9333305 9333758 -715279 - IDEFIX_LTR LTR Gypsy -102 492 1 6 656 2766 47 63 0 chrU 9333759 9334140 -714897 + PROTOP_A DNA P 701 1105 0 6 656 3235 229 27 27 chrU 9334564 9335700 -713337 - SAR_DM Satellite Satellite -208 1136 1 6 656 9212 23 14 1 chrU 9335801 9336949 -712088 + ROO_I LTR Pao 2296 3458 -4798 6 656 30 27 0 0 chrU 9337120 9337157 -711880 + AT_rich Low_complexity Low_complexity 1 37 0 6 656 31 82 0 0 chrU 9337381 9337454 -711583 + AT_rich Low_complexity Low_complexity 1 73 0 6 656 3142 59 0 2 chrU 9338298 9338738 -710299 - BATUMI_I LTR Pao -222 7741 7303 6 656 421 51 0 0 chrU 9338761 9338820 -710217 + BATUMI_I LTR Pao 6427 6485 -1478 6 656 1976 49 4 11 chrU 9338817 9339084 -709953 + BATUMI_I LTR Pao 6737 7001 -962 6 656 2626 89 8 8 chrU 9339044 9339444 -709593 - BATUMI_I LTR Pao -1543 6420 6087 6 656 380 323 23 32 chrU 9339774 9340170 -708867 - BURDOCK_I LTR Gypsy -4643 1492 850 6 656 22 56 0 0 chrU 9340526 9340562 -708475 + AT_rich Low_complexity Low_complexity 1 36 0 6 656 2902 92 28 2 chrU 9340794 9341219 -707818 - Gypsy_I LTR Gypsy -609 5898 5463 6 656 231 139 0 0 chrU 9341220 9341263 -707774 + G6_DM LINE Jockey 1 43 -1999 6 656 28 0 0 0 chrU 9341913 9341941 -707096 + AT_rich Low_complexity Low_complexity 1 28 0 6 656 3791 30 0 0 chrU 9342041 9342504 -706533 + DIVER_I LTR Pao 5181 5643 0 6 656 1192 107 0 93 chrU 9342504 9342751 -706286 + DIVER_LTR LTR Pao 1 224 0 6 656 3370 36 0 0 chrU 9342772 9343188 -705849 + R1_DM LINE R1 1455 1870 -3486 6 656 4772 213 24 6 chrU 9344535 9345571 -703466 - HMSBEAGLE_I LTR Gypsy -3331 3198 2144 6 656 651 118 100 0 chrU 9345565 9345675 -703362 - HMSBEAGLE_I LTR Gypsy -4494 2035 1915 6 656 634 265 35 103 chrU 9345858 9346287 -702750 - Gypsy12_LTR LTR Gypsy -1258 1078 679 6 656 2010 192 12 41 chrU 9346338 9346821 -702216 - Gypsy12_LTR LTR Gypsy -1867 469 1 6 656 834 46 0 0 chrU 9346820 9346929 -702108 - Gypsy12_I LTR Gypsy 0 5546 5438 6 656 9389 9 36 11 chrU 9347029 9348176 -700861 + Invader3_I LTR Gypsy 873 2047 -2841 6 656 30 0 0 0 chrU 9348278 9348308 -700729 + AT_rich Low_complexity Low_complexity 1 30 0 6 656 1690 111 16 60 chrU 9348535 9348851 -700186 - Gypsy6A_LTR LTR Gypsy -118 302 1 6 656 2395 113 23 11 chrU 9348804 9349422 -699615 + DMSAT6 Satellite Satellite 1 624 -138 6 656 208 200 31 0 chrU 9351221 9351286 -697751 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 656 22 35 0 0 chrU 9351480 9351509 -697528 + AT_rich Low_complexity Low_complexity 1 29 0 6 656 224 185 31 0 chrU 9351796 9351861 -697176 + (TAA)n Simple_repeat Simple_repeat 2 68 0 6 656 21 0 0 0 chrU 9352015 9352036 -697001 + AT_rich Low_complexity Low_complexity 1 21 0 6 656 1185 28 0 0 chrU 9353260 9353402 -695635 - TRANSPAC_I LTR Gypsy -4448 142 1 6 656 2879 3 0 0 chrU 9353402 9353732 -695305 - TRANSPAC_LTR LTR Gypsy 0 330 1 6 656 862 22 28 28 chrU 9353732 9353872 -695165 + NTS_DM Other Other 101 240 0 6 656 1741 21 17 17 chrU 9353872 9354112 -694925 + NTS_DM Other Other 1 240 0 6 656 1127 8 0 0 chrU 9354112 9354245 -694792 + NTS_DM Other Other 1 133 -107 6 656 1324 0 0 0 chrU 9354245 9354406 -694631 + NTS_DM Other Other 38 198 -42 6 656 4146 106 6 3 chrU 9354506 9355125 -693912 + Gypsy12_I LTR Gypsy 2385 3005 -2541 6 656 2339 14 42 0 chrU 9355125 9355411 -693626 - Invader3_LTR LTR Gypsy 0 298 1 6 656 1923 4 25 0 chrU 9355411 9355652 -693385 - Invader3_I LTR Gypsy 0 4888 4642 6 656 284 0 0 25 chrU 9355752 9355792 -693245 + PROTOP_B DNA P 1115 1153 0 6 656 1895 55 53 0 chrU 9355792 9356229 -692808 + PROTOP_B DNA P 420 754 -399 6 656 26 30 0 0 chrU 9356592 9356625 -692412 + AT_rich Low_complexity Low_complexity 1 33 0 6 656 28 71 0 0 chrU 9356753 9356809 -692228 + AT_rich Low_complexity Low_complexity 1 56 0 6 656 838 181 87 90 chrU 9357099 9357409 -691628 - TIRANT_LTR LTR Gypsy -108 309 1 6 656 30 27 0 0 chrU 9357619 9357656 -691381 + AT_rich Low_complexity Low_complexity 1 37 0 6 656 9546 4 20 0 chrU 9358242 9359386 -689651 - ACCORD_I LTR Gypsy -3620 2668 1502 6 656 4410 45 103 7 chrU 9359486 9360628 -688409 + BATUMI_I LTR Pao 1158 2409 -5554 6 656 1525 130 17 64 chrU 9360730 9361091 -687946 - BATUMI_I LTR Pao -6871 1092 749 6 656 380 98 52 52 chrU 9361132 9361227 -687810 - BATUMI_I LTR Pao -7194 769 675 6 656 5536 5 0 0 chrU 9361227 9361872 -687165 - QUASIMODO_LTR LTR Gypsy 0 658 14 6 656 1138 30 154 6 chrU 9361974 9362143 -686894 - PROTOP_B DNA P -959 194 1 6 656 451 153 70 12 chrU 9362261 9362402 -686635 - TART LINE telomeric -3988 10489 10371 6 656 382 249 154 69 chrU 9362407 9362653 -686384 - TAHRE LINE telomeric -463 10000 9807 6 656 2708 105 11 52 chrU 9362656 9363118 -685919 - Gypsy12_LTR LTR Gypsy -23 2313 1871 6 656 23 0 0 0 chrU 9363240 9363263 -685774 + AT_rich Low_complexity Low_complexity 1 23 0 6 656 299 165 48 117 chrU 9363499 9363602 -685435 + Copia_I LTR Copia 4401 4496 -97 6 656 27 49 0 0 chrU 9364284 9364325 -684712 + AT_rich Low_complexity Low_complexity 1 41 0 6 656 587 128 7 138 chrU 9364765 9364910 -684127 + Invader4_I LTR Gypsy 1820 1945 -468 6 656 797 129 17 175 chrU 9364903 9365195 -683842 + Invader4_I LTR Gypsy 2167 2412 -1 6 656 1578 180 39 12 chrU 9365196 9365533 -683504 + Invader4_LTR LTR Gypsy 1 346 0 6 656 233 258 0 0 chrU 9365533 9365599 -683438 + DOC2_DM LINE Jockey 3770 3835 -958 6 656 878 77 0 0 chrU 9365705 9365822 -683215 - G5_DM LINE Jockey -4736 120 4 6 656 837 99 0 12 chrU 9365849 9366019 -683018 + RSP Satellite Satellite 1 168 0 6 656 804 112 7 18 chrU 9366048 9366847 -682190 + RSP Satellite Satellite 1 790 -8 6 656 33 0 0 0 chrU 9366949 9366982 -682055 + AT_rich Low_complexity Low_complexity 1 33 0 6 656 22 35 0 0 chrU 9367275 9367304 -681733 + AT_rich Low_complexity Low_complexity 1 29 0 6 656 50 18 0 0 chrU 9367479 9367536 -681501 + AT_rich Low_complexity Low_complexity 1 57 0 6 656 224 185 31 0 chrU 9367755 9367820 -681217 + (TTA)n Simple_repeat Simple_repeat 2 68 0 6 656 8736 19 36 3 chrU 9369436 9370572 -678465 + IDEFIX_I LTR Gypsy 3168 4341 -1287 6 656 3364 106 44 0 chrU 9370674 9371303 -677734 - TART LINE telomeric -13211 1266 687 6 656 3209 116 52 10 chrU 9371300 9371814 -677223 - TART_B1 LINE telomeric -5769 4885 4350 6 656 2018 151 2 27 chrU 9371915 9372318 -676719 - TART LINE telomeric -7252 7225 6833 6 656 5532 25 0 3 chrU 9372366 9373056 -675981 + PROTOP_A DNA P 1 688 -417 6 656 5771 85 86 24 chrU 9373156 9374125 -674912 + STALKER4_I LTR Gypsy 421 1507 -5023 6 656 189 0 0 0 chrU 9374125 9374146 -674891 + (TATAA)n Simple_repeat Simple_repeat 2 22 0 6 656 5771 79 88 23 chrU 9374146 9374297 -674740 + STALKER4_I LTR Gypsy 1508 1660 -4870 6 656 550 335 55 26 chrU 9374400 9374493 -674544 - Gypsy_DS LTR Gypsy -3524 3488 3374 6 656 1505 23 19 0 chrU 9374493 9374707 -674330 - TLD2 Unknown Unknown 0 218 1 6 656 550 335 55 26 chrU 9374707 9375071 -673966 - Gypsy_DS LTR Gypsy -3524 3373 2920 6 656 1620 11 0 0 chrU 9375638 9376171 -672866 + (TATAA)n Simple_repeat Simple_repeat 1 533 0 6 656 2667 39 0 0 chrU 9376171 9376507 -672530 + DM1731_LTR LTR Copia 1 336 0 6 656 2224 4 4 7 chrU 9376507 9376778 -672259 + DM1731_I LTR Copia 1 270 -3706 6 656 2086 15 11 4 chrU 9376878 9377140 -671897 + ACCORD2_I LTR Gypsy 135 398 -6814 6 656 3240 43 20 26 chrU 9377139 9377599 -671438 + ACCORD2_I LTR Gypsy 520 1176 -6036 6 656 2880 27 113 2 chrU 9377600 9378016 -671021 + ACCORD2_I LTR Gypsy 1801 2262 -4950 6 656 547 311 32 43 chrU 9378528 9379216 -669821 - GTWIN_I LTR Gypsy -2883 3538 3027 6 656 824 26 0 0 chrU 9379144 9379258 -669779 - TLD2 Unknown Unknown 0 218 105 6 656 2091 190 78 34 chrU 9379359 9380323 -668714 - TAHRE LINE telomeric -630 9833 8952 6 656 2403 29 139 3 chrU 9380598 9380943 -668094 + IDEFIX_LTR LTR Gypsy 203 594 0 6 656 25 0 0 0 chrU 9381133 9381158 -667879 + AT_rich Low_complexity Low_complexity 1 25 0 6 656 304 138 0 17 chrU 9381236 9381295 -667742 - PROTOP_B DNA P -1095 58 1 6 656 3307 36 0 0 chrU 9381318 9381738 -667299 + IDEFIX_I LTR Gypsy 1 420 -5208 6 656 264 184 0 103 chrU 9381853 9381950 -667087 - ROVER-I_DM LTR Gypsy -6497 87 1 6 656 388 100 14 28 chrU 9381950 9382013 -667024 - DMTOM1_LTR LTR Gypsy 0 410 349 6 656 571 148 40 16 chrU 9382013 9382137 -666900 - DMTOM1_LTR LTR Gypsy 0 410 284 6 656 248 172 17 17 chrU 9382154 9382213 -666824 - DM176_LTR LTR Gypsy -141 366 308 6 656 2133 44 3 64 chrU 9382448 9382762 -666275 - MAX_I LTR Pao -7619 295 1 6 656 1048 139 102 0 chrU 9382762 9382977 -666060 - MAX_LTR LTR Pao 0 321 85 6 656 2489 26 0 10 chrU 9383077 9383387 -665650 + BATUMI_I LTR Pao 4894 5200 -2763 6 656 945 42 0 0 chrU 9383389 9383508 -665529 + BATUMI_I LTR Pao 6302 6420 -1543 6 656 2388 51 3 24 chrU 9383523 9383862 -665175 - BATUMI_I LTR Pao -991 6972 6641 6 656 2087 72 0 4 chrU 9383859 9384138 -664899 + Gypsy12_I LTR Gypsy 5269 5546 0 6 656 358 125 13 77 chrU 9384138 9384216 -664821 + Gypsy12_LTR LTR Gypsy 1 73 -2263 6 656 34 24 0 0 chrU 9385243 9385284 -663753 + AT_rich Low_complexity Low_complexity 1 41 0 6 656 287 110 269 21 chrU 9385294 9385387 -663650 - HETA LINE telomeric -171 5910 5795 6 656 1420 71 38 5 chrU 9385557 9385769 -663268 - TART LINE telomeric -6977 7500 7282 6 656 268 0 0 0 chrU 9385770 9385801 -663236 + NINJA_LTR LTR Pao 1 31 -286 6 656 4193 106 83 43 chrU 9385801 9386694 -662343 - PROTOP_A DNA P 0 1105 177 6 656 854 294 72 9 chrU 9386794 9387113 -661924 + Gypsy6_I LTR Gypsy 6673 7011 -1 6 656 1707 108 16 60 chrU 9387116 9387432 -661605 + Gypsy6A_LTR LTR Gypsy 1 302 -118 6 656 3606 29 0 4 chrU 9387483 9387933 -661104 + MDG1_I LTR Gypsy 4093 4540 -2056 6 656 9582 9 9 0 chrU 9388033 9389171 -659866 - DMRT1B LINE R1 -298 4885 3738 6 656 2029 26 8 4 chrU 9389282 9389548 -659489 + IDEFIX_LTR LTR Gypsy 328 594 0 6 656 21 0 0 0 chrU 9389738 9389759 -659278 + AT_rich Low_complexity Low_complexity 1 21 0 6 656 1935 29 4 0 chrU 9390165 9390409 -658628 + IDEFIX_I LTR Gypsy 1 245 -5383 6 656 831 141 207 6 chrU 9390892 9391071 -657966 + DNAREP1_DM LINE Penelope 22 236 -358 6 656 21 57 0 0 chrU 9391112 9391147 -657890 + AT_rich Low_complexity Low_complexity 1 35 0 6 656 24 0 0 0 chrU 9391432 9391456 -657581 + AT_rich Low_complexity Low_complexity 1 24 0 7 656 2357 31 0 0 chrU 9391747 9392038 -656999 - FW_DM LINE Jockey -397 4295 4005 7 656 6498 27 12 4 chrU 9392036 9392850 -656187 - FW_DM LINE Jockey -950 3742 2922 7 656 456 0 0 0 chrU 9392832 9392885 -656152 - FW_DM LINE Jockey -2503 2189 2137 7 656 4064 12 0 2 chrU 9392985 9393482 -655555 + DOC LINE Jockey 4230 4725 0 7 656 1022 52 13 13 chrU 9393480 9393637 -655400 + G5_DM LINE Jockey 4700 4856 0 7 656 1499 115 4 4 chrU 9393636 9393880 -655157 - BS2 LINE Jockey -4464 257 14 7 656 1689 31 53 0 chrU 9394223 9394450 -654587 - IDEFIX_I LTR Gypsy -5389 239 1 7 656 28 0 0 0 chrU 9394721 9394749 -654288 + AT_rich Low_complexity Low_complexity 1 28 0 7 656 2775 38 3 5 chrU 9394955 9395322 -653715 - IDEFIX_LTR LTR Gypsy -56 538 173 7 656 21 89 0 0 chrU 9395615 9395671 -653366 + AT_rich Low_complexity Low_complexity 1 56 0 7 656 2661 60 53 0 chrU 9396216 9396596 -652441 - PROTOP_A DNA P 0 1105 706 7 656 2984 102 7 2 chrU 9396708 9397169 -651868 - TART LINE telomeric -7281 7196 6734 7 656 1101 228 50 65 chrU 9397197 9397832 -651205 - TART LINE telomeric -10448 4029 3832 7 656 5240 5 0 0 chrU 9397932 9398545 -650492 + G2_DM LINE Jockey 661 1273 -1829 7 656 4490 4 0 6 chrU 9398540 9399068 -649969 + G2_DM LINE Jockey 1386 1910 -1192 7 656 5322 93 98 17 chrU 9399168 9400159 -648878 - PROTOP_B DNA P -82 1071 1 7 656 4424 4 0 0 chrU 9400404 9400910 -648127 + SSU-rRNA_Dme rRNA rRNA 256 761 -1234 7 656 3868 196 15 19 chrU 9401640 9402775 -646262 + SAR_DM Satellite Satellite 1 1130 -216 7 656 8638 43 26 0 chrU 9402875 9404010 -645027 - IDEFIX_I LTR Gypsy -3127 2501 1337 7 656 617 307 55 17 chrU 9404738 9405092 -643945 - GTWIN_I LTR Gypsy -2883 3538 3119 7 656 4635 0 0 5 chrU 9405345 9405897 -643140 + FW_DM LINE Jockey 4144 4692 0 7 656 592 272 37 56 chrU 9406128 9406397 -642640 - TV1I LTR Gypsy -5118 942 669 7 656 2718 3 0 3 chrU 9406580 9406898 -642139 + QUASIMODO_LTR LTR Gypsy 342 658 0 7 656 6881 6 7 5 chrU 9406898 9407715 -641322 + QUASIMODO_I LTR Gypsy 1 819 -5241 7 656 4362 25 0 0 chrU 9407815 9408342 -640695 - DM1731_I LTR Copia -2430 1546 1020 7 656 533 77 13 0 chrU 9408375 9408453 -640584 + R1_DM LINE R1 1 79 -5277 7 656 3737 45 2 0 chrU 9408455 9408949 -640088 + R1_DM LINE R1 630 1124 -4232 7 656 3530 80 2 27 chrU 9409049 9409568 -639469 + Gypsy12_I LTR Gypsy 809 1314 -4232 7 656 3852 10 0 68 chrU 9409568 9410084 -638953 + T412LTR LTR LTR 1 481 0 7 656 3335 12 0 17 chrU 9409768 9410183 -638854 + DM412 LTR Gypsy 1 408 -6489 7 656 4017 80 30 41 chrU 9410283 9411417 -637620 - Copia_I LTR Copia -1582 3011 1935 7 656 9623 2 20 3 chrU 9411517 9412651 -636386 + SSU-rRNA_Dme rRNA rRNA 557 1710 -285 7 656 7153 126 1 0 chrU 9412753 9413885 -635152 + HETA LINE telomeric 2158 3290 -2791 7 656 2645 82 14 15 chrU 9414004 9415118 -633919 + DMSAT6 Satellite Satellite 1 1113 -3 7 656 3797 189 24 23 chrU 9415222 9416351 -632686 - SAR_DM Satellite Satellite -242 1130 1 7 656 4533 18 0 11 chrU 9416451 9417015 -632022 - PROTOP_A DNA P -547 558 1 7 656 22 0 0 0 chrU 9417310 9417332 -631705 + AT_rich Low_complexity Low_complexity 1 22 0 7 656 26 0 0 0 chrU 9418324 9418350 -630687 + AT_rich Low_complexity Low_complexity 1 26 0 7 656 3485 2 0 2 chrU 9418374 9418774 -630263 - BLOOD_LTR LTR Gypsy 0 399 1 7 656 348 0 0 0 chrU 9418774 9418816 -630221 - BLOOD_I LTR Gypsy 0 6613 6572 7 656 829 318 40 46 chrU 9419163 9419838 -629199 + MDG1_I LTR Gypsy 1748 2418 -4178 7 656 294 0 0 0 chrU 9420148 9420183 -628854 - MDG1_LTR LTR Gypsy -321 121 87 7 656 423 100 0 0 chrU 9420183 9420253 -628784 + (TTA)n Simple_repeat Simple_repeat 3 72 0 7 656 3571 29 7 0 chrU 9420293 9420740 -628297 + G2_DM LINE Jockey 2644 3093 -9 7 656 1698 232 141 47 chrU 9421413 9422436 -626601 - Gypsy12_LTR LTR Gypsy -648 1688 570 7 656 3940 195 16 23 chrU 9422612 9423743 -625294 + SAR_DM Satellite Satellite 1 1123 -208 7 656 1029 22 58 0 chrU 9423843 9423980 -625057 - STALKER4_LTR LTR Gypsy -257 145 1 7 656 7489 17 15 10 chrU 9423980 9424974 -624063 - STALKER4_I LTR Gypsy 0 6530 5532 7 656 2568 199 101 48 chrU 9425079 9425849 -623188 + Gypsy12_LTR LTR Gypsy 1503 2313 -23 7 656 737 256 54 22 chrU 9425861 9426137 -622900 + TAHRE LINE telomeric 9807 10091 -372 7 656 372 149 14 0 chrU 9426131 9426205 -622832 + HETA LINE telomeric 5796 5870 -211 7 656 420 39 0 0 chrU 9426305 9426357 -622680 + TAHRE LINE telomeric 10393 10444 -19 7 656 2377 163 13 11 chrU 9426362 9426833 -622204 + TAHRE LINE telomeric 9979 10450 -13 7 656 1520 178 62 46 chrU 9426852 9427434 -621603 + HETA LINE telomeric 87 677 -5404 7 656 701 24 0 0 chrU 9427535 9427620 -621417 - QUASIMODO_I LTR Gypsy -5975 85 1 7 656 5448 1 19 1 chrU 9427620 9428267 -620770 - QUASIMODO_LTR LTR Gypsy 0 658 1 7 656 3027 15 8 0 chrU 9428267 9428665 -620372 - QUASIMODO_I LTR Gypsy 0 6060 5660 7 656 3613 187 25 18 chrU 9428765 9429894 -619143 + SAR_DM Satellite Satellite 1 1137 -216 7 656 551 0 126 8 chrU 9429996 9430234 -618803 + (TA)n Simple_repeat Simple_repeat 1 265 0 7 656 1927 5 0 0 chrU 9430234 9430458 -618579 + DIVER_LTR LTR Pao 1 224 0 7 656 4469 1 1 1 chrU 9430479 9431125 -617912 + DIVER_I LTR Pao 1 688 -4955 7 656 947 8 0 8 chrU 9431225 9431353 -617684 + STALKER4_I LTR Gypsy 6404 6530 0 7 656 3104 57 1 17 chrU 9431353 9431793 -617244 + STALKER4_LTR LTR Gypsy 1 392 -10 7 656 4495 40 0 0 chrU 9431799 9432354 -616683 + R1_DM LINE R1 1290 1844 -3512 7 656 575 208 12 75 chrU 9432528 9432752 -616285 + Gypsy8_LTR LTR Gypsy 67 304 0 7 656 389 154 13 0 chrU 9432726 9432804 -616233 + Gypsy8_I LTR Gypsy 1 79 -4268 7 656 554 15 0 0 chrU 9433683 9433750 -615287 + Gypsy_I LTR Gypsy 6441 6507 0 7 656 3906 27 4 2 chrU 9433750 9434231 -614806 + Gypsy_LTR LTR Gypsy 1 482 0 7 656 502 73 0 24 chrU 9434231 9434306 -614731 - ROO_I LTR Pao -7454 802 730 7 656 294 106 0 0 chrU 9434306 9434353 -614684 + (CTG)n Simple_repeat Simple_repeat 1 47 0 7 656 1266 71 18 86 chrU 9434353 9434683 -614354 - ROO_I LTR Pao -7616 640 258 7 656 21 0 0 0 chrU 9434783 9434804 -614233 + AT_rich Low_complexity Low_complexity 1 21 0 7 656 4729 10 0 7 chrU 9434914 9435501 -613536 + MICROPIA_I LTR Gypsy 3882 4464 -12 7 656 4332 21 8 6 chrU 9435505 9436041 -612996 - MICROPIA_I LTR Gypsy -510 3966 3430 7 656 4781 5 2 5 chrU 9436141 9436706 -612331 - CIRCE LINE Composite -2278 4078 3516 7 656 1382 158 0 0 chrU 9436705 9436977 -612060 - DM297_I LTR Gypsy -406 5761 5490 7 10 979 204 27 14 chrU 9436975 9437269 -611768 - DM297_I LTR Gypsy -1433 4734 4437 7 657 1926 61 67 0 chrU 9437370 9437733 -611304 - PROTOP_B DNA P -399 754 420 7 657 6277 14 0 1 chrU 9437733 9438499 -610538 - PROTOP_A DNA P 0 1105 341 7 657 1527 104 17 66 chrU 9438599 9438886 -610151 + Gypsy6A_LTR LTR Gypsy 30 302 -118 7 657 33 25 0 0 chrU 9439114 9439154 -609883 + AT_rich Low_complexity Low_complexity 1 40 0 7 657 409 380 29 3 chrU 9439379 9439727 -609310 + Gypsy6_I LTR Gypsy 945 1301 -5711 7 657 962 16 0 0 chrU 9439827 9439948 -609089 - BATUMI_I LTR Pao -475 7488 7368 7 657 1734 5 0 9 chrU 9439938 9440149 -608888 + BATUMI_I LTR Pao 7755 7963 0 7 657 1987 39 3 34 chrU 9440149 9440441 -608596 + BATUMI_I LTR Pao 7002 7284 -679 7 657 515 51 13 0 chrU 9440445 9440524 -608513 - BATUMI_I LTR Pao -581 7382 7303 7 657 3134 22 10 7 chrU 9440547 9440955 -608082 + BATUMI_I LTR Pao 6427 6835 -1128 7 657 772 29 144 0 chrU 9441055 9441159 -607878 - PROTOP_A DNA P -986 119 1 7 657 3424 31 24 7 chrU 9442282 9442742 -606295 - BATUMI_I LTR Pao -7495 468 1 7 657 1629 51 16 29 chrU 9442742 9442986 -606051 - BATUMI_LTR LTR Pao 0 272 32 7 657 2564 82 78 7 chrU 9443001 9443409 -605628 - IDEFIX_I LTR Gypsy -2100 3528 3092 7 657 1539 17 0 0 chrU 9443509 9443690 -605347 + Invader1_LTR LTR Gypsy 243 423 0 7 657 3645 230 3 3 chrU 9443698 9444636 -604401 + DM412 LTR Gypsy 5275 6212 -685 7 657 4361 0 0 0 chrU 9444736 9445241 -603796 + FW_DM LINE Jockey 4188 4692 0 7 657 4952 23 0 5 chrU 9445246 9445863 -603174 + IDEFIX_I LTR Gypsy 2485 3098 -2530 7 657 872 25 119 0 chrU 9445965 9446083 -602954 + DNAREP1_DM LINE Penelope 454 585 -9 7 657 8498 30 35 6 chrU 9447190 9448316 -600721 - IDEFIX_I LTR Gypsy -1956 3672 2515 7 657 3321 20 2 0 chrU 9448416 9448822 -600215 - PROTOP_A DNA P -698 407 1 7 657 5343 54 33 0 chrU 9448822 9449541 -599496 - TART_B1 LINE telomeric -7034 3620 2878 7 657 237 159 73 73 chrU 9450178 9450246 -598791 - Gypsy4_I LTR Gypsy -1897 4391 4324 7 657 498 285 65 44 chrU 9450269 9450397 -598640 - Gypsy4_I LTR Gypsy -3195 2972 2752 7 657 1358 39 63 0 chrU 9450397 9450602 -598435 - TLD2 Unknown Unknown 0 218 1 7 657 498 285 65 44 chrU 9450602 9450764 -598273 - Gypsy4_I LTR Gypsy -3195 2751 2468 7 657 529 0 0 0 chrU 9450868 9450931 -598106 - Gypsy_I LTR Gypsy -6444 63 1 7 657 3869 31 4 2 chrU 9450929 9451410 -597627 - Gypsy_LTR LTR Gypsy 0 482 1 7 657 490 17 0 0 chrU 9451410 9451469 -597568 - Invader2_LTR LTR Gypsy -207 59 1 7 657 1342 162 25 9 chrU 9451469 9451792 -597245 + ROVER-I_DM LTR Gypsy 6057 6384 -200 7 657 614 167 33 7 chrU 9451832 9451983 -597054 - DNAREP1_DM LINE Penelope -305 289 135 7 657 4708 4 0 0 chrU 9452094 9452635 -596402 - DOC LINE Jockey -4181 544 4 7 657 262 106 0 21 chrU 9452655 9452703 -596334 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 657 242 173 13 0 chrU 9453324 9453399 -595638 + MAX_I LTR Pao 433 508 -7406 7 657 4767 0 0 0 chrU 9453395 9453985 -595052 + DOC6_DM LINE Jockey 3633 4222 0 7 657 21 57 0 0 chrU 9454100 9454135 -594902 + AT_rich Low_complexity Low_complexity 1 35 0 7 657 1754 0 0 0 chrU 9454247 9454446 -594591 - NOMAD_LTR LTR Gypsy 0 518 320 7 657 1873 94 74 3 chrU 9454600 9454899 -594138 - MDG1_LTR LTR Gypsy -29 413 94 7 657 345 93 0 0 chrU 9454901 9454955 -594082 + (TTA)n Simple_repeat Simple_repeat 3 56 0 7 657 5327 20 31 1 chrU 9454971 9455671 -593366 - Invader2_I LTR Gypsy -1167 3425 2705 7 657 4675 2 0 2 chrU 9455771 9456312 -592725 + LSU-rRNA_Dme rRNA rRNA 1967 2506 -1394 7 657 5003 3 0 0 chrU 9456314 9456896 -592141 + R2_DM LINE R2 558 1139 -2468 7 657 9613 7 7 0 chrU 9456996 9458120 -590917 + DM1731_I LTR Copia 1184 2315 -1661 7 657 4698 29 2 2 chrU 9458220 9458808 -590229 - R1_DM LINE R1 -229 5127 4540 7 657 4363 20 2 2 chrU 9458806 9459344 -589693 - R1_DM LINE R1 -1164 4192 3655 7 657 4632 4 2 2 chrU 9459444 9459988 -589049 - POGO DNA Pogo -1577 544 1 7 657 4869 10 0 2 chrU 9459988 9460568 -588469 - R1_DM LINE R1 -187 5169 4591 7 657 34 24 0 0 chrU 9460810 9460851 -588186 + AT_rich Low_complexity Low_complexity 1 41 0 7 657 6656 33 97 30 chrU 9461892 9462895 -586142 - PROTOP_A DNA P -35 1070 1 7 657 930 35 0 0 chrU 9462900 9463015 -586022 - DMCR1A LINE CR1 -2834 1636 1522 7 657 1503 46 0 4 chrU 9463115 9463644 -585393 + (CTTAT)n Simple_repeat Simple_repeat 1 527 0 7 657 695 50 0 10 chrU 9463646 9463671 -585366 + (TTCTC)n Simple_repeat Simple_repeat 2 26 0 7 657 1364 44 0 6 chrU 9463671 9463852 -585185 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 7 657 695 50 0 10 chrU 9463852 9463927 -585110 + (TTCTC)n Simple_repeat Simple_repeat 2 76 0 7 657 1134 96 4 4 chrU 9463927 9464209 -584828 + (CTTAT)n Simple_repeat Simple_repeat 1 282 0 7 657 5364 0 0 0 chrU 9464338 9464959 -584078 - FW_DM LINE Jockey -3611 1081 461 7 657 4228 2 20 2 chrU 9464954 9465461 -583576 + DMRT1B LINE R1 2383 2898 -2285 7 657 3141 7 17 0 chrU 9465561 9465964 -583073 - PROTOP_A DNA P -150 955 546 7 657 2204 14 0 4 chrU 9465964 9466241 -582796 + Copia_LTR LTR Copia 1 276 0 7 657 3701 0 61 0 chrU 9466241 9466684 -582353 + Copia_I LTR Copia 1 470 -4123 7 657 9292 8 1 14 chrU 9466784 9467907 -581130 + STALKER4_I LTR Gypsy 3871 4978 -1552 7 657 4832 38 48 9 chrU 9468007 9468671 -580366 + Transib5 DNA Transib 1707 2396 -605 7 657 753 80 26 0 chrU 9468672 9468785 -580252 - DMCR1A LINE CR1 -2 4468 4353 7 657 2552 50 0 9 chrU 9468787 9469130 -579907 - DMCR1A LINE CR1 -236 4234 3895 7 657 3223 5 3 3 chrU 9469230 9469608 -579429 - R2_DM LINE R2 -3227 380 3 7 657 6067 11 32 3 chrU 9469613 9470353 -578684 - LSU-rRNA_Dme rRNA rRNA -1316 2584 1823 7 657 2562 46 29 3 chrU 9471128 9471476 -577561 - DIVER2_I LTR Pao -1705 2442 2086 7 657 672 24 0 0 chrU 9471488 9471573 -577464 - DIVER2_I LTR Pao -4036 111 27 7 657 1527 87 4 32 chrU 9471681 9471930 -577107 - BATUMI_I LTR Pao -7721 242 1 7 657 2015 35 3 31 chrU 9471930 9472221 -576816 - BATUMI_I LTR Pao -679 7284 7002 7 657 1915 125 94 23 chrU 9472897 9473285 -575752 + TART LINE telomeric 3632 4029 -10448 7 657 3105 159 13 43 chrU 9473301 9474014 -575023 + TART LINE telomeric 6655 7302 -7175 7 657 2587 25 3 0 chrU 9474119 9474445 -574592 - NINJA_I LTR Pao -1686 4325 3999 7 657 3900 33 0 6 chrU 9474422 9475241 -573796 - NINJA_I LTR Pao -3164 2847 1983 7 657 3587 199 19 23 chrU 9475341 9476391 -572646 - SAR_DM Satellite Satellite -1086 1045 1 7 657 830 265 21 18 chrU 9476126 9476453 -572584 + XDMR_DM Unknown Unknown 6 333 -27 7 657 825 10 0 0 chrU 9476562 9476658 -572379 - QUASIMODO_I LTR Gypsy -5964 96 1 7 657 5439 27 8 4 chrU 9476658 9477397 -571640 - QUASIMODO_LTR LTR Gypsy 0 658 1 7 657 2177 42 35 0 chrU 9477397 9477682 -571355 - ZAM_I LTR Gypsy -5502 1988 1694 7 657 4589 16 3 36 chrU 9477784 9478370 -570667 + Gypsy12_LTR LTR Gypsy 1770 2336 0 7 657 2300 200 29 6 chrU 9478378 9478897 -570140 + TOM_I LTR Gypsy 2541 3071 -3041 7 657 9115 23 8 0 chrU 9479001 9480120 -568917 + NINJA_I LTR Pao 638 1765 -4246 7 657 698 0 0 0 chrU 9480220 9480307 -568730 - QUASIMODO_LTR LTR Gypsy -571 87 1 7 657 7849 11 31 1 chrU 9480307 9481339 -567698 - QUASIMODO_I LTR Gypsy 0 6060 4998 7 657 2644 0 0 9 chrU 9481439 9481759 -567278 + BATUMI_I LTR Pao 7647 7963 0 7 657 1531 42 96 96 chrU 9481759 9482047 -566990 + BATUMI_I LTR Pao 7002 7289 -674 7 657 1450 212 58 4 chrU 9482039 9482558 -566479 + ROVER-I_DM LTR Gypsy 4773 5432 -1152 7 657 1197 21 0 0 chrU 9482658 9482800 -566237 - ACCORD2_I LTR Gypsy -6551 661 520 7 657 3165 10 7 37 chrU 9482799 9483209 -565828 - ACCORD2_I LTR Gypsy -6814 398 1 7 657 1547 15 73 20 chrU 9483209 9483413 -565624 - ACCORD2_LTR LTR Gypsy 0 215 1 7 657 2903 30 0 0 chrU 9483413 9483776 -565261 - ACCORD2_I LTR Gypsy -11 7201 6839 7 657 1775 117 11 11 chrU 9483876 9484161 -564876 - Gypsy12_I LTR Gypsy -3062 2484 2200 7 657 2620 44 101 66 chrU 9485205 9485643 -563394 + ROOA_I LTR Pao 5349 5801 -1048 7 657 4278 34 9 0 chrU 9485657 9486212 -562825 - Invader2_I LTR Gypsy -2205 2387 1828 7 657 23 68 0 0 chrU 9486781 9486825 -562212 + AT_rich Low_complexity Low_complexity 1 44 0 7 657 2946 0 0 65 chrU 9487530 9487914 -561123 - LSU-rRNA_Dme rRNA rRNA -3541 359 1 7 657 21 95 0 0 chrU 9487926 9487989 -561048 + AT_rich Low_complexity Low_complexity 1 63 0 7 657 34 24 0 0 chrU 9488203 9488244 -560793 + AT_rich Low_complexity Low_complexity 1 41 0 7 657 3169 29 0 2 chrU 9489965 9490382 -558655 + IDEFIX_I LTR Gypsy 5213 5628 0 7 657 810 10 0 0 chrU 9490382 9490482 -558555 + IDEFIX_LTR LTR Gypsy 1 100 -494 7 657 2832 27 32 3 chrU 9490480 9490851 -558186 + IDEFIX_LTR LTR Gypsy 213 594 0 7 657 23 0 0 0 chrU 9490851 9490874 -558163 + AT_rich Low_complexity Low_complexity 1 23 0 7 657 314 141 52 42 chrU 9490879 9490975 -558062 + STALKER4_I LTR Gypsy 6434 6530 0 7 657 485 84 0 0 chrU 9490975 9491046 -557991 + STALKER4_LTR LTR Gypsy 1 71 -331 7 657 6286 138 35 3 chrU 9491189 9492299 -556738 - HETA LINE telomeric -2911 3170 2025 7 657 2483 85 20 34 chrU 9492411 9493516 -555521 - DMSAT6 Satellite Satellite 0 1089 1 7 657 31 58 0 0 chrU 9493662 9493714 -555323 + AT_rich Low_complexity Low_complexity 1 52 0 7 657 2996 40 5 0 chrU 9493852 9494229 -554808 - STALKER4_LTR LTR Gypsy -23 379 1 7 657 2100 62 276 0 chrU 9494229 9494573 -554464 + TART LINE telomeric 7286 7726 -6751 7 657 3640 31 26 0 chrU 9494833 9495291 -553746 + BATUMI_I LTR Pao 4524 4993 -2970 7 657 2335 64 122 108 chrU 9495310 9495894 -553143 + BATUMI_I LTR Pao 362 953 -7010 7 657 28 71 0 0 chrU 9495894 9495950 -553087 + AT_rich Low_complexity Low_complexity 1 56 0 7 657 4347 32 11 0 chrU 9496050 9496616 -552421 + PROTOP_A DNA P 534 1105 0 7 657 4346 22 20 2 chrU 9496616 9497166 -551871 - NINJA_I LTR Pao -35 5976 5417 7 657 614 277 41 82 chrU 9497393 9497810 -551227 + Gypsy12_LTR LTR Gypsy 679 1078 -1258 7 657 2311 85 151 18 chrU 9497833 9498382 -550655 + Gypsy12_I LTR Gypsy 4717 5338 -208 7 657 7886 56 41 6 chrU 9498482 9499597 -549440 + BATUMI_I LTR Pao 3046 4199 -3764 7 657 32 26 0 0 chrU 9499955 9499994 -549043 + AT_rich Low_complexity Low_complexity 1 39 0 7 657 818 260 50 32 chrU 9500040 9500318 -548719 + TAHRE LINE telomeric 9807 10089 -374 7 657 456 144 81 0 chrU 9500318 9500429 -548608 + TART LINE telomeric 10370 10489 -3988 7 657 1249 32 0 7 chrU 9500580 9500735 -548302 + PROTOP_B DNA P 1 154 -999 7 657 401 26 39 13 chrU 9500736 9500814 -548223 + PROTOP_B DNA P 331 410 -743 7 657 3324 210 22 14 chrU 9500914 9502028 -547009 + SAR_DM Satellite Satellite 1 1123 -208 7 657 22 56 0 0 chrU 9502175 9502211 -546826 + AT_rich Low_complexity Low_complexity 1 36 0 7 657 3882 52 72 10 chrU 9502306 9502893 -546144 - G2_DM LINE Jockey -1069 2033 1411 7 657 36 53 0 0 chrU 9503056 9503113 -545924 + AT_rich Low_complexity Low_complexity 1 57 0 7 657 21 0 0 0 chrU 9503121 9503142 -545895 + AT_rich Low_complexity Low_complexity 1 21 0 7 657 4955 5 0 0 chrU 9503346 9503918 -545119 + LSU-rRNA_Dme rRNA rRNA 2011 2582 -1318 7 657 4852 0 0 0 chrU 9503911 9504461 -544576 + R2_DM LINE R2 1620 2169 -1438 7 657 5860 88 58 62 chrU 9504561 9505676 -543361 - PROTOP_B DNA P -30 1123 13 7 657 8679 16 32 6 chrU 9505776 9506891 -542146 - QUASIMODO_I LTR Gypsy -4103 1957 814 7 657 466 234 112 8 chrU 9507008 9507180 -541857 - Gypsy12_LTR LTR Gypsy -1924 412 237 7 657 6558 26 25 43 chrU 9507179 9508105 -540932 + MAX_I LTR Pao 6705 7613 -301 7 657 4789 7 0 0 chrU 9508205 9508760 -540277 - DOC LINE Jockey -4168 557 3 7 657 40 49 0 0 chrU 9508796 9508857 -540180 + AT_rich Low_complexity Low_complexity 1 61 0 7 657 26 50 0 0 chrU 9509087 9509127 -539910 + AT_rich Low_complexity Low_complexity 1 40 0 7 657 394 32 0 31 chrU 9509419 9509483 -539554 - BATUMI_I LTR Pao -891 7072 7011 7 657 1732 40 4 39 chrU 9509481 9509741 -539296 - BATUMI_I LTR Pao -702 7261 7011 7 657 1819 38 4 40 chrU 9509739 9510011 -539026 - BATUMI_I LTR Pao -702 7261 7000 7 657 397 319 0 0 chrU 9510090 9510234 -538803 + TOM_I LTR Gypsy 416 559 -5553 7 657 387 38 0 0 chrU 9510633 9510686 -538351 - ACCORD2_I LTR Gypsy -38 7174 7122 7 657 1082 24 243 28 chrU 9510682 9510900 -538137 - ACCORD2_I LTR Gypsy -5441 1771 1507 7 657 2082 25 14 31 chrU 9510981 9511273 -537764 - ACCORD2_I LTR Gypsy -5845 1367 1081 7 657 3634 9 0 63 chrU 9511273 9511747 -537290 + MICROPIA_LTR LTR Gypsy 1 444 -32 7 657 4353 6 0 0 chrU 9511847 9512363 -536674 + G6_DM LINE Jockey 1527 2042 0 7 657 240 244 0 6 chrU 9512470 9512554 -536483 - DM1731_I LTR Copia -3523 639 521 7 657 972 8 0 23 chrU 9513150 9513278 -535759 - NTS_DM Other Other -78 162 38 7 657 1113 15 0 0 chrU 9513278 9513411 -535626 - NTS_DM Other Other -107 133 1 7 657 1062 19 25 19 chrU 9513411 9513568 -535469 - NTS_DM Other Other 0 240 83 7 657 747 10 0 50 chrU 9513571 9513672 -535365 - NTS_DM Other Other -107 133 38 7 657 246 119 43 29 chrU 9513677 9513746 -535291 + (TA)n Simple_repeat Simple_repeat 2 71 0 7 657 388 100 14 28 chrU 9513746 9513809 -535228 - DMTOM1_LTR LTR Gypsy 0 410 349 7 657 552 148 40 16 chrU 9513809 9513933 -535104 - DMTOM1_LTR LTR Gypsy 0 410 284 7 657 248 172 17 17 chrU 9513950 9514009 -535028 - DM176_LTR LTR Gypsy -141 366 308 7 657 9203 10 0 10 chrU 9514275 9515389 -533648 + FW_DM LINE Jockey 959 2061 -2631 7 657 2688 3 0 0 chrU 9515489 9515801 -533236 + Copia_I LTR Copia 4282 4593 0 7 657 2256 4 0 4 chrU 9515801 9516078 -532959 + Copia_LTR LTR Copia 1 276 0 7 657 3894 27 19 0 chrU 9516078 9516594 -532443 - ROO_I LTR Pao -3103 5153 4628 7 657 926 170 31 25 chrU 9516701 9516996 -532041 + DNAREP1_DM LINE Penelope 117 332 -262 7 657 282 112 343 9 chrU 9516984 9517092 -531945 + DNAREP1_DM LINE Penelope 189 332 -262 7 657 372 193 17 9 chrU 9517072 9517187 -531850 + DNAREP1_DM LINE Penelope 184 299 -295 7 657 1149 60 169 0 chrU 9517243 9517427 -531610 - DMCR1A LINE CR1 -428 4042 3828 7 657 1468 62 57 0 chrU 9517478 9517689 -531348 - DMCR1A LINE CR1 -1217 3253 3031 7 657 866 89 0 0 chrU 9517689 9517813 -531224 - DMCR1A LINE CR1 -1553 2917 2794 7 657 3760 19 2 2 chrU 9517913 9518374 -530663 + R1_DM LINE R1 3492 3952 -1404 7 657 4800 36 25 2 chrU 9518381 9519025 -530012 + R1_DM LINE R1 439 1097 -4259 7 657 3542 202 34 12 chrU 9519128 9520235 -528802 + SAR_DM Satellite Satellite 1 1131 -208 7 657 26 74 0 0 chrU 9520438 9520492 -528545 + AT_rich Low_complexity Low_complexity 1 54 0 7 657 359 236 70 85 chrU 9520525 9520724 -528313 - HMSBEAGLE_I LTR Gypsy -6110 419 224 7 657 322 178 50 101 chrU 9521853 9521972 -527065 - Copia_I LTR Copia -80 4513 4401 7 657 22 56 0 0 chrU 9522017 9522053 -526984 + AT_rich Low_complexity Low_complexity 1 36 0 7 657 2069 160 33 13 chrU 9522169 9522654 -526383 + TART LINE telomeric 8952 9392 -5085 7 657 1033 42 90 6 chrU 9522760 9522926 -526111 + IDEFIX_LTR LTR Gypsy 415 594 0 7 657 306 296 40 0 chrU 9523275 9523400 -525637 - Gypsy6_I LTR Gypsy -2512 4500 4371 7 657 285 281 0 0 chrU 9523465 9523547 -525490 - NINJA_I LTR Pao -2943 3068 2987 7 657 9279 4 8 7 chrU 9523971 9525082 -523955 - MAX_I LTR Pao -6151 1763 652 7 657 31 58 0 0 chrU 9525214 9525266 -523771 + AT_rich Low_complexity Low_complexity 1 52 0 7 657 3182 51 1 14 chrU 9525354 9525793 -523244 - STALKER4_LTR LTR Gypsy -3 399 1 7 657 8732 15 3 4 chrU 9526398 9527504 -521533 + Invader2_I LTR Gypsy 2443 3547 -1045 7 657 3637 33 0 2 chrU 9527604 9528060 -520977 + G2_DM LINE Jockey 2637 3091 -11 7 657 4937 45 15 0 chrU 9528061 9528713 -520324 - G2_DM LINE Jockey -574 2528 1867 7 657 626 29 37 37 chrU 9528814 9528923 -520114 + NTS_DM Other Other 132 240 0 7 657 1756 17 17 17 chrU 9528923 9529163 -519874 + NTS_DM Other Other 1 240 0 7 657 1756 17 17 17 chrU 9529163 9529403 -519634 + NTS_DM Other Other 1 240 0 7 657 1457 63 16 29 chrU 9529403 9529646 -519391 + NTS_DM Other Other 1 240 0 7 657 1510 72 17 21 chrU 9529646 9529887 -519150 + NTS_DM Other Other 1 240 0 7 657 268 28 0 27 chrU 9529887 9529924 -519113 + NTS_DM Other Other 1 36 -204 7 657 2435 186 216 26 chrU 9530028 9530930 -518107 + Gypsy5_I LTR Gypsy 2528 3600 -2909 7 657 1490 87 64 0 chrU 9530915 9531134 -517903 + DM297_I LTR Gypsy 414 646 -5521 7 657 22 56 0 0 chrU 9531399 9531435 -517602 + AT_rich Low_complexity Low_complexity 1 36 0 7 657 322 178 50 101 chrU 9531480 9531599 -517438 + Copia_I LTR Copia 4401 4513 -80 7 657 5446 2 0 0 chrU 9531708 9532343 -516694 - G2_DM LINE Jockey -244 2858 2224 7 657 3101 37 7 2 chrU 9532444 9532849 -516188 - PROTOP_A DNA P -625 480 74 7 657 23 68 0 0 chrU 9533036 9533080 -515957 + AT_rich Low_complexity Low_complexity 1 44 0 7 657 26 30 0 0 chrU 9533126 9533159 -515878 + AT_rich Low_complexity Low_complexity 1 33 0 7 657 5988 61 15 4 chrU 9533653 9534474 -514563 - R1_DM LINE R1 -4526 830 1 7 657 934 35 0 0 chrU 9534507 9534621 -514416 - R1_DM LINE R1 0 5356 5243 7 657 1149 14 7 0 chrU 9534618 9534762 -514275 - R1_DM LINE R1 -290 5066 4922 7 657 2250 31 16 11 chrU 9534862 9535019 -514018 - DM176_I LTR Gypsy -5740 680 519 7 657 181 30 29 57 chrU 9535019 9535054 -513983 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 657 2250 31 16 11 chrU 9535054 9535259 -513778 - DM176_I LTR Gypsy -5902 518 317 7 657 40 21 0 0 chrU 9535656 9535703 -513334 + AT_rich Low_complexity Low_complexity 1 47 0 7 657 731 0 0 0 chrU 9535885 9535971 -513066 + Copia2_LTR_DM LTR Copia 19 104 -94 7 657 360 107 0 0 chrU 9537567 9537623 -511414 + DNAREP1_DM LINE Penelope 386 441 -153 7 657 474 126 32 0 chrU 9538294 9538389 -510648 - PROTOP_B DNA P -841 312 215 7 657 279 125 236 0 chrU 9538583 9538871 -510166 + (TTTAG)n Simple_repeat Simple_repeat 1 355 0 7 657 232 0 0 0 chrU 9538871 9538905 -510132 - Copia_LTR LTR Copia 0 276 243 7 657 1042 0 0 0 chrU 9538905 9539033 -510004 - Copia_LTR LTR Copia 0 276 149 7 657 2414 10 0 7 chrU 9539288 9539597 -509440 - MDG1_I LTR Gypsy -1490 5106 4800 7 657 4818 10 46 2 chrU 9539697 9540286 -508751 - MICROPIA_I LTR Gypsy -2860 1616 1002 7 657 377 21 0 0 chrU 9540285 9540332 -508705 - MICROPIA_LTR LTR Gypsy -429 47 1 7 657 2899 53 20 2 chrU 9540409 9540805 -508232 - DIVER2_I LTR Pao -1705 2442 2040 7 657 645 0 41 31 chrU 9540908 9541005 -508032 + NTS_DM Other Other 141 238 -2 7 657 1724 25 17 17 chrU 9541007 9541247 -507790 + NTS_DM Other Other 1 240 0 7 657 1796 13 17 13 chrU 9541247 9541486 -507551 + NTS_DM Other Other 1 240 0 7 657 1861 0 17 13 chrU 9541486 9541725 -507312 + NTS_DM Other Other 1 240 0 7 657 1847 4 17 13 chrU 9541725 9541964 -507073 + NTS_DM Other Other 1 240 0 7 657 424 0 0 0 chrU 9541964 9542013 -507024 + NTS_DM Other Other 1 49 -191 7 657 8313 50 14 6 chrU 9542114 9543221 -505816 + BATUMI_I LTR Pao 3082 4197 -3766 7 657 9455 9 0 4 chrU 9543321 9544429 -504608 + R2_DM LINE R2 2288 3391 -216 7 657 1797 293 3 8 chrU 9544529 9545175 -503862 - G2_DM LINE Jockey -1513 1589 947 7 657 1519 246 5 5 chrU 9545221 9545634 -503403 - G2_DM LINE Jockey -2249 853 441 7 657 4618 2 0 0 chrU 9545736 9546312 -502725 + DOC6_DM LINE Jockey 3647 4222 0 7 657 23 0 0 0 chrU 9546312 9546335 -502702 + AT_rich Low_complexity Low_complexity 1 23 0 7 657 1909 107 106 3 chrU 9546339 9546678 -502359 - Invader1_I LTR Gypsy -95 3091 2718 7 657 599 143 0 0 chrU 9546943 9547055 -501982 - ARS406_DM Unknown Unknown -241 112 1 7 657 3803 193 22 27 chrU 9546962 9548037 -501000 + SAR_DM Satellite Satellite 195 1264 -208 7 657 4157 6 0 0 chrU 9549356 9549872 -499165 + DM412B_LTR LTR Gypsy 1 483 -88 7 657 2063 16 16 0 chrU 9549886 9550132 -498905 + PROTOP_A DNA P 840 1089 -16 7 657 2098 99 40 0 chrU 9550139 9550462 -498575 + TART_B1 LINE telomeric 2399 2734 -7920 7 657 3301 71 9 0 chrU 9550562 9551027 -498010 + BS2 LINE Jockey 4253 4721 0 7 657 753 117 1 12 chrU 9551043 9551183 -497854 + BS2 LINE Jockey 4605 4721 0 7 657 256 123 70 0 chrU 9551203 9551260 -497777 + Gypsy_I LTR Gypsy 252 312 -6195 7 657 3230 0 0 20 chrU 9551269 9551668 -497369 - LINEJ1_DM LINE Jockey 0 5020 4630 7 657 9326 9 13 0 chrU 9551768 9552873 -496164 + DM1731_I LTR Copia 1313 2431 -1545 7 657 3815 51 25 0 chrU 9553075 9553585 -495452 + G2_DM LINE Jockey 2573 3095 -7 7 657 3802 46 0 3 chrU 9553573 9554078 -494959 + G2_DM LINE Jockey 2003 2478 -624 7 657 3056 192 75 17 chrU 9554178 9555268 -493769 - SAR_DM Satellite Satellite -453 1153 1 7 657 457 140 29 20 chrU 9555181 9555283 -493754 + ARS406_DM Unknown Unknown 10 112 -241 7 657 9825 15 7 0 chrU 9555383 9556488 -492549 + MAX_I LTR Pao 3107 4219 -3695 7 657 593 92 35 0 chrU 9556729 9556816 -492221 - NTS_DM Other Other -150 90 1 7 657 1036 48 35 13 chrU 9556816 9556997 -492040 - NTS_DM Other Other 0 240 26 7 657 262 150 0 0 chrU 9557074 9557114 -491923 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 657 251 186 0 0 chrU 9557166 9557209 -491828 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 7 657 237 175 0 0 chrU 9557258 9557298 -491739 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 657 242 103 25 25 chrU 9557350 9557390 -491647 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 657 2078 0 4 0 chrU 9557463 9557693 -491344 + G_DM LINE Jockey 1 231 -4115 7 657 5094 33 39 6 chrU 9558998 9559636 -489401 + IDEFIX_I LTR Gypsy 1334 1992 -3636 7 657 3415 69 11 0 chrU 9559636 9560102 -488935 + IDEFIX_I LTR Gypsy 2877 3347 -2281 7 657 1742 295 53 23 chrU 9560221 9561008 -488029 - Copia2_I LTR Copia -2379 1783 973 7 657 4672 0 4 0 chrU 9561409 9561942 -487095 + DOC LINE Jockey 4191 4725 0 7 657 1221 85 0 0 chrU 9561957 9562170 -486867 + (TAA)n Simple_repeat Simple_repeat 1 213 0 7 657 30 0 0 0 chrU 9562170 9562200 -486837 + AT_rich Low_complexity Low_complexity 1 30 0 7 657 1491 28 0 0 chrU 9562203 9562383 -486654 + (TAA)n Simple_repeat Simple_repeat 1 180 0 7 657 980 0 8 8 chrU 9562388 9562511 -486526 - IVK_DM LINE I 0 5402 5280 7 657 1960 0 0 13 chrU 9562611 9562839 -486198 + Copia_I LTR Copia 4369 4593 0 7 657 2377 4 0 0 chrU 9562839 9563115 -485922 + Copia_LTR LTR Copia 1 276 0 7 657 239 0 0 0 chrU 9563115 9563149 -485888 + Copia_LTR LTR Copia 243 276 0 7 657 4840 18 0 0 chrU 9563149 9563711 -485326 - QUASIMODO_I LTR Gypsy -2480 3580 3019 7 657 5061 17 0 12 chrU 9563814 9564412 -484625 + LINEJ1_DM LINE Jockey 4430 5020 0 7 657 1386 145 16 20 chrU 9564664 9564917 -484120 - GTWIN_LTR LTR Gypsy -93 402 151 7 657 9269 26 5 3 chrU 9565017 9566118 -482919 + STALKER4_I LTR Gypsy 4069 5171 -1359 7 657 3829 221 32 23 chrU 9566220 9567321 -481716 + SAR_DM Satellite Satellite 1 1111 -208 7 657 1712 42 5 5 chrU 9567424 9567642 -481395 - IDEFIX_LTR LTR Gypsy -34 560 343 7 82 5455 81 72 0 chrU 9567636 9568524 -480513 - IDEFIX_I LTR Gypsy -334 5294 4343 7 658 28 0 0 0 chrU 9569437 9569465 -479572 + AT_rich Low_complexity Low_complexity 1 28 0 7 658 588 248 59 20 chrU 9569468 9569723 -479314 - HMSBEAGLE_I LTR Gypsy -757 5772 5508 7 658 27 29 0 0 chrU 9570117 9570151 -478886 + AT_rich Low_complexity Low_complexity 1 34 0 7 658 620 108 271 0 chrU 9570409 9570538 -478499 - FB4_DM DNA Tc1 -3923 166 3 7 658 473 249 31 16 chrU 9571031 9571300 -477737 + Stalker2_I LTR Gypsy 6950 7119 -283 7 658 22 35 0 0 chrU 9571430 9571459 -477578 + AT_rich Low_complexity Low_complexity 1 29 0 7 658 35 71 0 0 chrU 9571546 9571616 -477421 + AT_rich Low_complexity Low_complexity 1 70 0 7 658 196 67 21 62 chrU 9571616 9571664 -477373 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 7 658 351 0 0 0 chrU 9571683 9571723 -477314 + STALKER4_I LTR Gypsy 6491 6530 0 7 658 3158 14 14 0 chrU 9571723 9572090 -476947 + Stalker3_LTR LTR Gypsy 1 372 0 7 658 292 51 26 0 chrU 9572090 9572129 -476908 - R1_DM LINE R1 -523 4833 4794 7 658 1978 0 0 0 chrU 9572229 9572451 -476586 + Copia_I LTR Copia 4372 4593 0 7 658 2377 4 0 0 chrU 9572451 9572727 -476310 + Copia_LTR LTR Copia 1 276 0 7 658 1087 109 0 12 chrU 9572761 9572928 -476109 - TART LINE telomeric -7207 7270 7106 7 658 932 146 6 30 chrU 9572930 9573099 -475938 - TART LINE telomeric -7328 7149 6985 7 658 445 80 77 39 chrU 9573089 9573167 -475870 - TART LINE telomeric -3805 10672 10592 7 658 1049 78 13 8 chrU 9573157 9573330 -475707 - TART LINE telomeric -3814 10663 10510 7 658 5739 68 253 3 chrU 9573430 9574531 -474506 - IDEFIX_I LTR Gypsy -2597 3031 1655 7 658 537 55 0 0 chrU 9574631 9574704 -474333 + (TATAA)n Simple_repeat Simple_repeat 1 73 0 7 658 693 45 0 0 chrU 9574720 9574808 -474229 - Copia2_LTR_DM LTR Copia -110 88 1 7 658 3852 32 6 0 chrU 9574808 9575276 -473761 - Copia2_I LTR Copia 0 4162 3692 7 658 48 0 0 0 chrU 9575295 9575343 -473694 + AT_rich Low_complexity Low_complexity 1 48 0 7 658 8586 51 20 2 chrU 9575832 9576932 -472105 - R1_DM LINE R1 -3906 1450 331 7 658 9569 5 25 1 chrU 9577032 9578132 -470905 + DOC LINE Jockey 1035 2160 -2565 7 658 4877 6 0 0 chrU 9578232 9578772 -470265 + LSU-rRNA_Dme rRNA rRNA 2113 2652 -1248 7 658 5090 0 0 0 chrU 9578771 9579332 -469705 + R1_DM LINE R1 1522 2082 -3274 7 658 4487 29 2 11 chrU 9579432 9579983 -469054 - BATUMI_I LTR Pao -4409 3554 3009 7 658 4186 21 25 52 chrU 9579975 9580531 -468506 - BATUMI_I LTR Pao -5289 2674 2134 7 658 5235 119 13 0 chrU 9580631 9581411 -467626 + TAHRE LINE telomeric 1480 2269 -8194 7 658 339 80 20 0 chrU 9581411 9581461 -467576 + ACCORD2_LTR LTR Gypsy 1 51 -164 7 658 595 58 56 22 chrU 9581507 9581596 -467441 + ACCORD2_LTR LTR Gypsy 124 215 0 7 658 868 97 30 0 chrU 9581596 9581730 -467307 + HETA LINE telomeric 2432 2569 -3512 7 658 47 0 0 0 chrU 9582696 9582743 -466294 + AT_rich Low_complexity Low_complexity 1 47 0 7 658 1317 53 35 0 chrU 9582759 9582929 -466108 - PROTOP_B DNA P -967 186 11 7 658 4529 16 0 0 chrU 9583029 9583541 -465496 + DM1731_I LTR Copia 2762 3273 -703 7 658 2903 164 10 12 chrU 9583536 9584127 -464910 + SAR_DM Satellite Satellite 413 1002 -470 7 658 4008 104 41 88 chrU 9584228 9585054 -463983 + PROTOP_B DNA P 367 1153 0 7 658 3576 28 148 0 chrU 9585425 9585644 -463393 + TART LINE telomeric 7496 7722 -6755 7 658 549 55 0 0 chrU 9585644 9585717 -463320 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 7 658 3576 28 148 0 chrU 9585717 9585969 -463068 + TART LINE telomeric 7723 8035 -6442 7 658 4056 81 0 0 chrU 9585970 9586523 -462514 + TART_B1 LINE telomeric 1002 1554 -9100 7 658 533 193 0 9 chrU 9586623 9586738 -462299 - SAR_DM Satellite Satellite -396 1076 963 7 658 406 192 10 20 chrU 9586728 9586829 -462208 + XDMR_DM Unknown Unknown 252 351 -9 7 658 3980 191 8 18 chrU 9586752 9587687 -461350 - SAR_DM Satellite Satellite -353 1119 195 7 658 785 103 8 0 chrU 9587594 9587720 -461317 + ARS406_DM Unknown Unknown 1 127 -226 7 658 4211 183 22 28 chrU 9587820 9588917 -460120 + SAR_DM Satellite Satellite 1 1091 -203 7 658 4295 4 0 0 chrU 9589017 9589489 -459548 - DOC LINE Jockey -4251 474 3 7 658 4984 5 0 2 chrU 9589504 9590077 -458960 + DOC LINE Jockey 4154 4725 0 7 658 235 0 0 0 chrU 9590078 9590104 -458933 - ROO_I LTR Pao -4037 4219 4194 7 658 1237 280 133 5 chrU 9590220 9590824 -458213 - Invader6_I LTR Gypsy -2033 2066 1386 7 658 1796 173 190 2 chrU 9590900 9591310 -457727 - Invader1_I LTR Gypsy -1872 1314 828 7 658 38 22 0 0 chrU 9591994 9592039 -456998 + AT_rich Low_complexity Low_complexity 1 45 0 7 658 9445 9 24 0 chrU 9592606 9593699 -455338 + MDG3_I LTR Gypsy 2273 3391 -1595 7 658 3493 3 0 0 chrU 9593802 9594184 -454853 + ROO_LTR LTR Pao 47 428 0 7 658 379 92 5 117 chrU 9594184 9594278 -454759 - TART LINE telomeric -4871 9606 9523 7 658 5471 3 0 6 chrU 9594264 9594897 -454140 - TART LINE telomeric -4 14473 13845 7 658 409 334 38 30 chrU 9595341 9595707 -453330 - Gypsy3_I LTR Gypsy -4812 1365 708 7 658 5106 7 0 0 chrU 9596191 9596754 -452283 - HOBO DNA hAT -2453 563 1 7 658 589 298 28 28 chrU 9597507 9597828 -451209 + DM176_I LTR Gypsy 1839 2159 -4261 7 658 1415 12 6 6 chrU 9597769 9597936 -451101 - TLD3 Unknown Unknown -3 169 3 7 658 1603 271 17 17 chrU 9597935 9598478 -450559 + ROVER-I_DM LTR Gypsy 2616 3158 -3426 7 658 1443 34 0 0 chrU 9599017 9599253 -449784 + (GAGAA)n Simple_repeat Simple_repeat 1 236 0 7 658 444 93 0 0 chrU 9599253 9599328 -449709 + (AAGTG)n Simple_repeat Simple_repeat 4 78 0 7 658 3953 191 17 21 chrU 9599772 9600864 -448173 + SAR_DM Satellite Satellite 1 1087 -203 7 658 5511 3 0 0 chrU 9600964 9601578 -447459 - FW_DM LINE Jockey -3564 1128 515 7 658 2106 179 11 4 chrU 9601606 9602056 -446981 + SAR_DM Satellite Satellite 326 778 -694 7 658 1216 19 0 6 chrU 9602156 9602313 -446724 + NTS_DM Other Other 46 201 -39 7 658 21 57 0 0 chrU 9602313 9602348 -446689 + AT_rich Low_complexity Low_complexity 1 35 0 7 658 870 9 9 27 chrU 9602374 9602485 -446552 + NTS_DM Other Other 25 133 -107 7 658 851 0 0 0 chrU 9602485 9602581 -446456 + NTS_DM Other Other 38 133 -107 7 658 1472 20 20 20 chrU 9602581 9602784 -446253 + NTS_DM Other Other 38 240 0 7 658 1811 21 17 17 chrU 9602784 9603024 -446013 + NTS_DM Other Other 1 240 0 7 658 1722 18 13 18 chrU 9603024 9603248 -445789 + NTS_DM Other Other 1 223 -17 7 658 860 269 20 13 chrU 9603348 9603649 -445388 - XDMR_DM Unknown Unknown -52 308 6 7 658 4048 203 24 27 chrU 9603383 9604439 -444598 + SAR_DM Satellite Satellite 1 1052 -396 7 658 5011 3 81 0 chrU 9604539 9605204 -443833 - CIRCE LINE Composite -5447 909 191 7 658 3524 26 10 2 chrU 9605214 9605630 -443407 - R1_DM LINE R1 -3326 2030 1612 7 658 3099 3 0 0 chrU 9605730 9606085 -442952 + Invader2_I LTR Gypsy 2591 2945 -1647 7 658 1216 7 0 0 chrU 9606100 9606253 -442784 + Invader2_I LTR Gypsy 3291 3443 -1149 7 658 4899 3 2 0 chrU 9606255 9606820 -442217 + Invader2_I LTR Gypsy 3634 4199 -393 7 658 1902 23 0 0 chrU 9606920 9607139 -441898 + MAX_LTR LTR Pao 103 321 0 7 658 7384 6 37 0 chrU 9607139 9608010 -441027 + MAX_I LTR Pao 1 903 -7011 7 658 1304 313 31 33 chrU 9608110 9609200 -439837 - SAR_DM Satellite Satellite -363 1087 1 7 658 22 56 0 0 chrU 9609431 9609467 -439570 + AT_rich Low_complexity Low_complexity 1 36 0 7 658 2653 165 125 21 chrU 9609621 9610371 -438666 + TART LINE telomeric 8950 9726 -4751 7 658 965 115 0 25 chrU 9610490 9610651 -438386 - DIVER_LTR LTR Pao -67 157 1 7 658 1571 84 0 55 chrU 9610652 9610905 -438132 - CIRCE LINE Composite -1869 4487 4249 7 658 2337 89 17 30 chrU 9610906 9611567 -437470 + DMSAT6 Satellite Satellite 1 652 -30 7 658 3242 18 0 13 chrU 9612870 9613267 -435770 - ACCORD2_I LTR Gypsy -5009 2203 1812 7 658 186 118 0 0 chrU 9613276 9613310 -435727 + (T)n Simple_repeat Simple_repeat 1 34 0 7 658 4882 26 115 0 chrU 9613319 9613926 -435111 - ACCORD2_I LTR Gypsy -6123 1089 413 7 658 1462 61 0 0 chrU 9614059 9614255 -434782 + I_DM LINE I 991 1186 -5045 7 658 632 163 350 46 chrU 9614251 9614491 -434546 + ROVER-LTR_DM LTR Gypsy 55 367 0 7 658 4623 4 0 0 chrU 9614503 9615010 -434027 + DM176_LTR LTR Gypsy 1 507 0 7 658 1243 14 0 0 chrU 9615010 9615148 -433889 + DM176_I LTR Gypsy 1 138 -6282 7 658 736 319 35 17 chrU 9615810 9616287 -432750 - GTWIN_I LTR Gypsy -2298 3562 3052 7 658 6818 24 78 2 chrU 9616437 9617526 -431511 - DMRT1B LINE R1 -434 4749 3578 7 658 4171 35 25 0 chrU 9617626 9618145 -430892 - MDG3_I LTR Gypsy -293 4693 4162 7 658 2023 27 33 52 chrU 9618174 9618446 -430591 - MDG3_LTR LTR Gypsy 0 267 1 7 658 2035 48 0 0 chrU 9618446 9618714 -430323 - MDG3_I LTR Gypsy 0 4986 4719 7 658 1470 170 55 84 chrU 9618814 9619410 -429627 - HETA LINE telomeric -5468 613 5 7 658 2561 128 11 23 chrU 9619462 9619902 -429135 - TAHRE LINE telomeric -17 10446 10012 7 658 3562 5 0 2 chrU 9620002 9620396 -428641 - Copia_I LTR Copia -4200 393 1 7 658 2425 11 0 0 chrU 9620396 9620672 -428365 - Copia_LTR LTR Copia 0 276 1 7 658 3812 5 0 2 chrU 9620672 9621090 -427947 + DOC LINE Jockey 3852 4268 -457 7 658 1996 185 7 5 chrU 9621190 9621597 -427440 - SAR_DM Satellite Satellite -728 744 337 7 658 730 99 9 0 chrU 9621585 9621696 -427341 + ARS406_DM Unknown Unknown 78 189 -164 7 658 3284 175 8 6 chrU 9621615 9622264 -426773 - SAR_DM Satellite Satellite -577 895 246 7 658 312 148 0 0 chrU 9622224 9622278 -426759 + ARS406_DM Unknown Unknown 1 54 -299 7 658 3623 12 0 71 chrU 9622378 9622830 -426207 + MICROPIA_LTR LTR Gypsy 57 476 0 7 658 1767 34 14 0 chrU 9622830 9623038 -425999 + MICROPIA_I LTR Gypsy 1 211 -4265 7 658 4031 7 0 0 chrU 9623028 9623466 -425571 + MICROPIA_I LTR Gypsy 616 1053 -3423 7 658 4811 2 0 2 chrU 9623566 9624095 -424942 - DOC6_DM LINE Jockey -3692 530 3 7 658 520 251 18 30 chrU 9624095 9624263 -424774 - QUASIMODO_I LTR Gypsy -368 5692 5527 7 658 2520 75 135 2 chrU 9624255 9624654 -424383 + PROTOP DNA P 176 627 -3853 7 658 7408 28 40 103 chrU 9624759 9625841 -423196 + MAX_I LTR Pao 1173 2186 -5728 7 658 9237 10 23 7 chrU 9625942 9626999 -422038 + DM1731_I LTR Copia 2903 3976 0 7 658 280 0 0 0 chrU 9626999 9627029 -422008 + DM1731_LTR LTR Copia 1 30 -306 7 658 8245 57 10 1 chrU 9627129 9628198 -420839 + IDEFIX_I LTR Gypsy 3992 5070 -558 7 658 4813 180 23 50 chrU 9628329 9629401 -419636 - HETA LINE telomeric -2249 3832 2809 7 658 5392 18 2 0 chrU 9629505 9630119 -418918 - PROTOP_A DNA P -490 615 1 7 658 2249 182 42 11 chrU 9630119 9630590 -418447 - Gypsy12_LTR LTR Gypsy -185 2151 1666 7 658 4747 2 2 0 chrU 9630692 9631212 -417825 + FW_DM LINE Jockey 4165 4685 -7 7 658 4873 31 9 0 chrU 9631200 9631776 -417261 + ROO_I LTR Pao 1965 2545 -5711 7 658 302 355 95 7 chrU 9632143 9632438 -416599 - BLASTOPIA_I LTR Gypsy -1 4480 4160 7 658 360 329 12 12 chrU 9632749 9632915 -416122 - BLASTOPIA_I LTR Gypsy -775 3706 3541 7 658 2004 32 0 4 chrU 9633062 9633315 -415722 + BATUMI_I LTR Pao 7314 7565 -398 7 658 1035 0 0 16 chrU 9633318 9633442 -415595 + BATUMI_I LTR Pao 7842 7963 0 7 658 2037 36 67 28 chrU 9633442 9633721 -415316 + BATUMI_I LTR Pao 7002 7291 -672 7 658 200 114 0 43 chrU 9633782 9633828 -415209 + T-rich Low_complexity Low_complexity 2 45 0 7 658 6235 102 88 33 chrU 9634248 9635295 -413742 - Gypsy12_I LTR Gypsy -4442 1104 1 7 658 735 106 248 0 chrU 9635434 9635575 -413462 - FB4_DM DNA Tc1 -3911 178 3 7 658 1674 72 4 31 chrU 9636292 9636520 -412517 - Baggins1 LINE LOA -262 5191 4970 7 658 556 307 84 37 chrU 9636626 9637029 -412008 - TV1I LTR Gypsy -5125 838 417 7 658 186 43 0 0 chrU 9637062 9637085 -411952 + (TTTTTA)n Simple_repeat Simple_repeat 1 23 0 7 658 648 37 0 0 chrU 9637806 9637887 -411150 + ARS406_DM Unknown Unknown 78 158 -195 7 658 4421 190 13 20 chrU 9637893 9638890 -410147 - SAR_DM Satellite Satellite -216 1256 267 7 658 1862 120 17 23 chrU 9638990 9639318 -409719 - DMRT1B LINE R1 -4847 336 1 7 658 4028 7 0 0 chrU 9639635 9640074 -408963 - DMRT1A LINE R1 -5 5178 4740 7 658 2496 42 57 0 chrU 9640174 9640505 -408532 + R1_DM LINE R1 598 947 -4409 7 658 6701 17 0 1 chrU 9640502 9641258 -407779 + R1_DM LINE R1 1870 2624 -2732 7 658 2885 24 0 3 chrU 9641358 9641691 -407346 + NINJA_I LTR Pao 4283 4614 -1397 7 658 1980 62 4 15 chrU 9641675 9641935 -407102 + NINJA_I LTR Pao 4755 5011 -1000 7 658 4108 36 10 8 chrU 9641937 9642442 -406595 + NINJA_I LTR Pao 5220 5725 -286 7 658 4210 35 34 21 chrU 9642613 9643140 -405897 + DIVER2_I LTR Pao 2417 2950 -1197 7 658 675 75 21 31 chrU 9643122 9643219 -405818 + DIVER2_I LTR Pao 3314 3409 -738 7 658 25 31 0 0 chrU 9643219 9643251 -405786 + AT_rich Low_complexity Low_complexity 1 32 0 7 658 1064 238 11 71 chrU 9643251 9643617 -405420 + Gypsy12_LTR LTR Gypsy 417 760 -1576 7 658 2836 30 6 0 chrU 9643726 9644060 -404977 + G2_DM LINE Jockey 1855 2190 -912 7 658 1114 97 0 0 chrU 9644061 9644215 -404822 - G2_DM LINE Jockey -196 2906 2753 7 658 1278 242 115 35 chrU 9644236 9644810 -404227 + G_DM LINE Jockey 234 853 -3493 7 658 7289 54 110 29 chrU 9644910 9645993 -403044 + Gypsy12_LTR LTR Gypsy 682 1852 -484 7 658 2606 102 14 39 chrU 9646096 9647175 -401862 - DMSAT6 Satellite Satellite -358 1051 1 7 658 5388 10 0 0 chrU 9647276 9647881 -401156 - Invader2_I LTR Gypsy -1438 3154 2550 7 658 4453 2 0 0 chrU 9647881 9648359 -400678 + GTWIN_LTR LTR Gypsy 1 478 -17 7 658 904 271 37 34 chrU 9648476 9648855 -400182 + ZAM_I LTR Gypsy 5236 5615 -1875 7 658 1845 14 81 0 chrU 9648956 9649178 -399859 - Invader6_LTR LTR Gypsy -153 240 1 7 658 189 0 0 0 chrU 9649183 9649204 -399833 + (GAAAA)n Simple_repeat Simple_repeat 4 24 0 7 658 1129 0 7 0 chrU 9649642 9649782 -399255 + Stalker2_I LTR Gypsy 7262 7402 0 7 658 3701 5 0 2 chrU 9649782 9650192 -398845 + Stalker2_LTR LTR Gypsy 1 409 -15 7 658 3099 65 11 17 chrU 9650216 9650724 -398313 + DOC2_DM LINE Jockey 598 1154 -3639 7 658 4551 191 13 20 chrU 9650825 9651871 -397166 - SAR_DM Satellite Satellite -242 1230 192 7 658 910 84 0 8 chrU 9651774 9651906 -397131 + ARS406_DM Unknown Unknown 1 131 -222 7 658 1120 16 0 0 chrU 9652027 9652150 -396887 - ROVER-I_DM LTR Gypsy -6461 123 1 7 658 2887 33 22 25 chrU 9652150 9652518 -396519 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 658 23 0 0 0 chrU 9652518 9652541 -396496 + AT_rich Low_complexity Low_complexity 1 23 0 7 658 924 173 32 16 chrU 9652541 9652729 -396308 - TAHRE LINE telomeric -9924 539 349 7 658 971 129 48 90 chrU 9652720 9653009 -396028 - HETA LINE telomeric -5615 466 190 7 658 622 28 0 0 chrU 9653008 9653080 -395957 - TAHRE LINE telomeric -11 10452 10381 7 658 1267 80 6 11 chrU 9653187 9653365 -395672 - BATUMI_I LTR Pao -7786 177 1 7 658 2082 32 3 92 chrU 9653365 9653679 -395358 - BATUMI_I LTR Pao -679 7284 6999 7 658 2874 203 22 8 chrU 9653672 9654268 -394769 - TAHRE LINE telomeric -236 10227 9624 7 658 5541 17 10 0 chrU 9654377 9655071 -393966 + Stalker2_I LTR Gypsy 6702 7402 0 7 658 3313 0 0 24 chrU 9655071 9655449 -393588 + Stalker2_LTR LTR Gypsy 1 369 -55 7 658 2584 93 44 31 chrU 9655549 9656630 -392407 - DMSAT6 Satellite Satellite -28 1094 1 7 658 7877 25 4 27 chrU 9656730 9657725 -391312 - DM176_I LTR Gypsy -5448 972 1 7 658 758 0 0 0 chrU 9657725 9657808 -391229 - DM176_LTR LTR Gypsy 0 507 425 7 658 2105 13 4 4 chrU 9657910 9658148 -390889 - MDG3_I LTR Gypsy -4748 238 1 7 658 2156 30 4 40 chrU 9658147 9658424 -390613 - MDG3_LTR LTR Gypsy 0 267 1 7 658 2217 102 51 44 chrU 9658599 9658989 -390048 - MDG1_I LTR Gypsy -5668 928 536 7 658 4976 6 40 1 chrU 9659090 9660170 -388867 + DM1731_I LTR Copia 1349 2470 -1506 7 658 5163 3 18 0 chrU 9660270 9660834 -388203 + LSU-rRNA_Dme rRNA rRNA 2115 2688 -1212 7 658 4546 6 0 4 chrU 9660850 9661350 -387687 + R2_DM LINE R2 3 500 -3107 7 658 721 302 42 45 chrU 9661457 9661835 -387202 + Gypsy12_I LTR Gypsy 3823 4199 -1347 7 658 4615 38 45 17 chrU 9661530 9662530 -386507 + CIRCE LINE Composite 1884 3334 -3022 7 658 3103 148 115 5 chrU 9662659 9663709 -385328 - IDEFIX_I LTR Gypsy -2171 3457 2292 7 658 2045 9 0 8 chrU 9663809 9664044 -384993 + BATUMI_I LTR Pao 7731 7963 0 7 658 2205 15 62 22 chrU 9664044 9664316 -384721 + BATUMI_I LTR Pao 7002 7284 -679 7 658 5031 23 0 0 chrU 9664316 9664888 -384149 + DIVER_I LTR Pao 3771 4342 -1301 7 658 5156 5 2 2 chrU 9664988 9665551 -383486 - LSU-rRNA_Dme rRNA rRNA -698 3202 2640 7 658 4769 2 0 0 chrU 9665549 9666066 -382971 - R1_DM LINE R1 0 5356 4840 7 658 9444 5 1 0 chrU 9666166 9667244 -381793 - ZAM_I LTR Gypsy -1404 6086 5008 7 658 5865 5 23 20 chrU 9667344 9668027 -381010 + MDG1_I LTR Gypsy 5783 6452 -144 7 658 180 0 0 0 chrU 9668027 9668047 -380990 + (TA)n Simple_repeat Simple_repeat 2 21 0 7 658 5865 18 24 19 chrU 9668047 9668186 -380851 + MDG1_I LTR Gypsy 6453 6595 -1 7 658 423 100 0 0 chrU 9668190 9668260 -380777 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 658 1368 12 0 0 chrU 9668260 9668422 -380615 + MDG1_LTR LTR Gypsy 87 248 -194 7 658 1952 0 0 12 chrU 9668522 9668764 -380273 - Copia_I LTR Copia -4354 239 1 7 658 232 0 0 0 chrU 9668764 9668798 -380239 - Copia_LTR LTR Copia 0 276 243 7 658 2286 4 0 0 chrU 9668798 9669074 -379963 - Copia_LTR LTR Copia 0 276 1 7 658 3371 14 19 2 chrU 9669074 9669493 -379544 - PROTOP_A DNA P -550 555 130 7 658 1189 19 0 6 chrU 9669700 9669863 -379174 + STALKER4_I LTR Gypsy 6369 6530 0 7 658 3465 0 0 2 chrU 9669863 9670266 -378771 + STALKER4_LTR LTR Gypsy 1 402 0 7 658 2425 152 8 4 chrU 9670297 9670778 -378259 - SAR_DM Satellite Satellite -610 862 380 7 658 8145 47 3 7 chrU 9670878 9671955 -377082 + BATUMI_I LTR Pao 3093 4164 -3799 7 658 505 15 0 0 chrU 9672055 9672121 -376916 + NTS_DM Other Other 68 133 -107 7 658 1252 18 0 6 chrU 9672121 9672286 -376751 + NTS_DM Other Other 38 201 -39 7 658 870 9 0 27 chrU 9672338 9672450 -376587 + NTS_DM Other Other 25 133 -107 7 658 1222 18 0 12 chrU 9672450 9672616 -376421 + NTS_DM Other Other 38 201 -39 7 658 21 57 0 0 chrU 9672616 9672651 -376386 + AT_rich Low_complexity Low_complexity 1 35 0 7 658 870 9 0 27 chrU 9672677 9672789 -376248 + NTS_DM Other Other 25 133 -107 7 658 1252 18 0 6 chrU 9672789 9672954 -376083 + NTS_DM Other Other 38 201 -39 7 658 21 57 0 0 chrU 9672954 9672989 -376048 + AT_rich Low_complexity Low_complexity 1 35 0 7 658 832 9 9 27 chrU 9673015 9673126 -375911 + NTS_DM Other Other 25 133 -107 7 658 2036 63 22 33 chrU 9673232 9673725 -375312 + DM176_I LTR Gypsy 192 633 -5787 7 658 4540 7 2 0 chrU 9673723 9674309 -374728 + DM176_I LTR Gypsy 1002 1588 -4832 7 658 906 19 0 0 chrU 9674421 9674528 -374509 - Baggins1 LINE LOA -32 5421 5315 7 658 1676 37 124 0 chrU 9674524 9674765 -374272 - Baggins1 LINE LOA -456 4997 4727 7 658 27 29 0 0 chrU 9674996 9675030 -374007 + AT_rich Low_complexity Low_complexity 1 34 0 7 658 5473 77 51 30 chrU 9675585 9676538 -372499 - STALKER4_I LTR Gypsy -4994 1536 564 7 658 1002 9 0 0 chrU 9676545 9676661 -372376 + SSU-rRNA_Dme rRNA rRNA 453 568 -1427 7 658 8708 4 45 1 chrU 9676761 9677837 -371200 + DM176_I LTR Gypsy 725 1847 -4573 7 658 3611 7 5 0 chrU 9677937 9678370 -370667 + DM176_LTR LTR Gypsy 73 507 0 7 658 5120 2 0 0 chrU 9678432 9679013 -370024 + LINEJ1_DM LINE Jockey 3598 4178 -842 7 658 2427 96 22 31 chrU 9679113 9680189 -368848 - DMSAT6 Satellite Satellite -4 1066 1 7 658 2353 160 60 19 chrU 9680289 9680818 -368219 + TART LINE telomeric 8952 9502 -4975 7 658 322 178 50 101 chrU 9680867 9680986 -368051 - Copia_I LTR Copia -80 4513 4401 7 658 22 56 0 0 chrU 9681031 9681067 -367970 + AT_rich Low_complexity Low_complexity 1 36 0 7 658 550 197 97 13 chrU 9681210 9681364 -367673 + HETA LINE telomeric 4031 4197 -1884 7 658 4813 40 3 8 chrU 9681464 9682539 -366498 - MDG3_I LTR Gypsy -2810 2176 1194 7 658 2739 206 23 21 chrU 9682643 9683407 -365630 + SAR_DM Satellite Satellite 1 765 -242 7 658 1097 223 3 0 chrU 9683422 9683714 -365323 + SAR_DM Satellite Satellite 496 788 -684 7 658 3625 7 127 2 chrU 9683814 9684271 -364766 - MAX_I LTR Pao -1070 6844 6331 7 658 650 184 0 0 chrU 9684991 9685127 -363910 - ARS406_DM Unknown Unknown -217 136 1 7 658 3012 222 54 19 chrU 9685030 9686060 -362977 + SAR_DM Satellite Satellite 191 1256 -216 7 658 716 137 119 179 chrU 9686163 9686448 -362589 + IDEFIX_LTR LTR Gypsy 327 594 0 7 658 3263 120 41 32 chrU 9686651 9687237 -361800 - IDEFIX_I LTR Gypsy -3454 2174 1584 7 658 3255 3 11 0 chrU 9687446 9687825 -361212 - SSU-rRNA_Dme rRNA rRNA 0 1995 1613 7 658 5030 5 0 0 chrU 9687827 9688411 -360626 - R1_DM LINE R1 -3165 2191 1608 7 658 532 182 0 8 chrU 9688511 9688638 -360399 - ARS406_DM Unknown Unknown -227 126 1 7 658 3381 215 30 14 chrU 9688540 9689582 -359455 + SAR_DM Satellite Satellite 191 1248 -224 7 658 4767 5 0 2 chrU 9690202 9690759 -358278 + DOC2_DM LINE Jockey 3637 4192 -601 7 658 3581 12 0 2 chrU 9691332 9691763 -357274 - Gypsy5_LTR LTR Gypsy 0 430 1 7 658 1459 0 6 0 chrU 9691763 9691933 -357104 - Gypsy5_I LTR Gypsy 0 6509 6339 7 658 1356 58 0 0 chrU 9692033 9692207 -356830 + (GAGAA)n Simple_repeat Simple_repeat 4 177 0 7 658 1599 10 0 3 chrU 9692208 9692510 -356527 + (GAAAA)n Simple_repeat Simple_repeat 1 301 0 7 658 709 22 11 0 chrU 9693206 9693297 -355740 - DM297_I LTR Gypsy -6075 92 1 7 658 3368 5 7 7 chrU 9693297 9693711 -355326 - DM297_LTR LTR Gypsy 0 414 1 7 658 3132 47 0 0 chrU 9693711 9694116 -354921 + PROTOP_A DNA P 701 1105 0 7 658 4635 9 0 0 chrU 9694379 9694944 -354093 - STALKER4_I LTR Gypsy -2960 3570 3006 7 658 1386 56 51 5 chrU 9694941 9695138 -353899 + DMTOM1_LTR LTR Gypsy 55 260 -150 7 658 904 111 5 36 chrU 9695279 9695452 -353585 - STALKER4_LTR LTR Gypsy -10 392 227 7 658 7936 56 28 0 chrU 9695552 9696624 -352413 - TART LINE telomeric -11921 2556 1455 7 658 183 80 0 0 chrU 9697282 9697307 -351730 + (TTG)n Simple_repeat Simple_repeat 2 26 0 7 658 2432 41 35 3 chrU 9697478 9697796 -351241 + PROTOP DNA P 1 328 -4152 7 658 4862 0 0 2 chrU 9697896 9698458 -350579 - DOC LINE Jockey -1913 2812 2252 7 658 235 250 0 0 chrU 9698471 9698539 -350498 + IDEFIX_I LTR Gypsy 4522 4589 -1039 7 658 3649 2 2 2 chrU 9698539 9698968 -350069 - DOC LINE Jockey -2294 2431 2003 7 82 3958 15 0 2 chrU 9699068 9699547 -349490 + FW_DM LINE Jockey 4205 4682 -10 7 659 1121 134 64 5 chrU 9699858 9700061 -348976 + DNAREP1_DM LINE Penelope 22 236 -358 7 659 1590 26 5 0 chrU 9701120 9701312 -347725 - PROTOP_A DNA P 0 1105 913 7 659 3182 135 7 16 chrU 9701419 9701992 -347045 + TAHRE LINE telomeric 9884 10451 -12 7 659 1729 144 17 44 chrU 9702013 9702472 -346565 + HETA LINE telomeric 5 451 -5630 7 659 3076 24 3 0 chrU 9702584 9702961 -346076 + BATUMI_I LTR Pao 6043 6420 -1543 7 659 4389 30 7 10 chrU 9702988 9703565 -345472 - BATUMI_I LTR Pao -962 7001 6427 7 659 458 45 0 0 chrU 9703588 9703654 -345383 + BATUMI_I LTR Pao 7303 7368 -595 7 659 520 201 0 65 chrU 9703761 9703931 -345106 + Gypsy8_I LTR Gypsy 66 224 -4123 7 659 38 51 0 0 chrU 9704487 9704546 -344491 + AT_rich Low_complexity Low_complexity 1 59 0 7 659 3745 116 82 37 chrU 9704925 9705757 -343280 - PROTOP_A DNA P -236 869 1 7 659 8669 18 27 0 chrU 9706096 9707167 -341870 - R1_DM LINE R1 -1727 3629 2530 7 659 1341 80 66 27 chrU 9707291 9707548 -341489 + BATUMI_I LTR Pao 292 558 -7405 7 659 3248 8 0 0 chrU 9707549 9707928 -341109 + DMRT1B LINE R1 1865 2243 -2940 7 659 3431 5 15 0 chrU 9707927 9708337 -340700 + DMRT1B LINE R1 2122 2537 -2646 7 659 22 56 0 0 chrU 9709079 9709115 -339922 + AT_rich Low_complexity Low_complexity 1 36 0 7 659 4944 47 13 33 chrU 9709727 9710416 -338621 + DIVER2_I LTR Pao 901 1575 -2572 7 659 2190 23 0 0 chrU 9710414 9710677 -338360 + DIVER2_I LTR Pao 3743 4005 -142 7 659 1720 5 0 0 chrU 9710777 9710975 -338062 - TART LINE telomeric -437 14040 13843 7 659 6838 34 8 1 chrU 9710963 9711847 -337190 - TART_B1 LINE telomeric -109 10545 9656 7 659 1255 284 10 8 chrU 9713521 9714032 -335005 - Copia_I LTR Copia -2314 2279 1768 7 659 1070 22 15 0 chrU 9714287 9714424 -334613 + MDG3_LTR LTR Gypsy 129 267 0 7 659 304 302 82 0 chrU 9715084 9715255 -333782 + Gypsy4_I LTR Gypsy 3175 3473 -2815 7 659 39 22 0 0 chrU 9715255 9715301 -333736 + AT_rich Low_complexity Low_complexity 1 46 0 7 659 856 87 16 0 chrU 9715688 9715815 -333222 - STALKER4_LTR LTR Gypsy -23 379 251 7 659 2402 104 57 5 chrU 9715815 9716202 -332835 - Gypsy6_LTR LTR Gypsy 0 407 1 7 659 2384 18 0 3 chrU 9716202 9716489 -332548 - Gypsy3_I LTR Gypsy 0 6177 5892 7 659 1963 0 4 0 chrU 9716625 9716856 -332181 + QUASIMODO_LTR LTR Gypsy 427 658 0 7 659 483 171 50 12 chrU 9717520 9717680 -331357 - TLD2 Unknown Unknown -3 215 50 7 659 455 79 13 13 chrU 9717813 9717890 -331147 - TOM_I LTR Gypsy -6035 77 1 7 659 1730 76 4 0 chrU 9717890 9718139 -330898 - DMTOM1_LTR LTR Gypsy 0 410 161 7 659 1140 180 17 53 chrU 9718269 9718569 -330468 + Gypsy5_LTR LTR Gypsy 1 289 -141 7 659 339 83 21 0 chrU 9718709 9718757 -330280 + Gypsy5_I LTR Gypsy 1 49 -6460 7 659 297 236 0 0 chrU 9719537 9719609 -329428 - BS2 LINE Jockey -502 4219 4148 7 659 22 0 0 0 chrU 9719903 9719925 -329112 + AT_rich Low_complexity Low_complexity 1 22 0 7 659 264 56 0 0 chrU 9719995 9720031 -329006 - NINJA_LTR LTR Pao -2 315 280 7 659 4120 6 73 2 chrU 9720131 9720638 -328399 + DMRT1B LINE R1 4641 5183 0 7 659 4481 24 0 0 chrU 9720651 9721199 -327838 - NINJA_I LTR Pao -5113 898 351 7 659 8530 16 7 0 chrU 9721299 9722366 -326671 - DM176_I LTR Gypsy -4389 2031 958 7 659 4902 85 23 0 chrU 9722467 9723117 -325920 + Gypsy12_I LTR Gypsy 2818 3482 -2064 7 659 2999 113 0 0 chrU 9723116 9723533 -325504 + Gypsy12_I LTR Gypsy 3722 4138 -1408 7 659 2720 0 3 0 chrU 9723633 9723942 -325095 - BLASTOPIA_I LTR Gypsy -4171 310 1 7 659 1775 24 116 16 chrU 9723942 9724192 -324845 - BLASTOPIA_LTR LTR Gypsy 0 275 1 7 659 1364 171 227 80 chrU 9724193 9724695 -324342 + MAX_I LTR Pao 557 1132 -6782 7 659 3991 198 19 24 chrU 9724801 9725830 -323207 + SAR_DM Satellite Satellite 246 1269 -203 7 659 938 93 0 0 chrU 9725727 9725867 -323170 - ARS406_DM Unknown Unknown -164 189 50 7 659 1360 127 161 6 chrU 9726253 9726608 -322429 + DMRT1A LINE R1 3056 3466 -1717 7 659 2541 98 194 5 chrU 9726602 9727034 -322003 + DMRT1A LINE R1 3859 4372 -811 7 659 440 246 0 0 chrU 9727598 9727708 -321329 + DM176_I LTR Gypsy 1839 1948 -4472 7 659 1572 268 0 2 chrU 9727731 9728199 -320838 + ROVER-I_DM LTR Gypsy 3341 3807 -2777 7 659 26 30 0 0 chrU 9729001 9729034 -320003 + AT_rich Low_complexity Low_complexity 1 33 0 7 659 23 78 0 0 chrU 9729080 9729131 -319906 + AT_rich Low_complexity Low_complexity 1 51 0 7 659 22 88 0 0 chrU 9729169 9729226 -319811 + AT_rich Low_complexity Low_complexity 1 57 0 7 659 2906 29 0 6 chrU 9729466 9729810 -319227 - ROO_I LTR Pao -526 7730 7389 7 659 6092 22 33 0 chrU 9729797 9730530 -318507 - ROO_I LTR Pao -2086 6170 5414 7 659 3972 54 12 0 chrU 9730630 9731134 -317903 - STALKER4_I LTR Gypsy -4280 2250 1741 7 659 2937 89 50 8 chrU 9731140 9731624 -317413 - STALKER4_I LTR Gypsy -5009 1521 1018 7 659 3395 13 0 0 chrU 9731794 9732190 -316847 - Invader2_I LTR Gypsy -1936 2656 2261 7 659 5577 19 0 0 chrU 9732183 9732858 -316179 - Invader2_I LTR Gypsy -2448 2144 1470 7 659 2266 0 0 4 chrU 9732958 9733216 -315821 - DOC LINE Jockey -4437 288 32 7 659 6185 25 49 9 chrU 9733244 9734022 -315015 + ROO_I LTR Pao 4219 5027 -3229 7 659 2436 18 0 7 chrU 9734122 9734403 -314634 - PROTOP_A DNA P -826 279 1 7 659 1052 154 15 30 chrU 9734403 9734604 -314433 - Gypsy12_LTR LTR Gypsy -2138 198 1 7 659 229 62 157 59 chrU 9734603 9734654 -314383 - Gypsy12_I LTR Gypsy 0 5546 5491 7 659 4093 95 0 0 chrU 9734647 9735186 -313851 - Gypsy12_I LTR Gypsy -1004 4542 4004 7 659 312 232 0 0 chrU 9735663 9735732 -313305 - BS2 LINE Jockey -507 4214 4146 7 659 22 0 0 0 chrU 9736015 9736037 -313000 + AT_rich Low_complexity Low_complexity 1 22 0 7 659 23 0 0 0 chrU 9737027 9737050 -311987 + AT_rich Low_complexity Low_complexity 1 23 0 7 659 46 0 0 0 chrU 9737096 9737142 -311895 + AT_rich Low_complexity Low_complexity 1 46 0 7 659 478 300 16 16 chrU 9737267 9737450 -311587 + ZAM_I LTR Gypsy 3745 3927 -3563 7 659 7983 9 3 55 chrU 9737613 9738676 -310361 - DM176_I LTR Gypsy -5344 1076 69 7 659 1544 37 5 40 chrU 9738776 9738999 -310038 - BATUMI_I LTR Pao -749 7214 7000 7 659 3809 184 8 8 chrU 9739015 9739839 -309198 - SAR_DM Satellite Satellite -396 1076 253 7 659 1397 175 210 60 chrU 9739941 9740426 -308611 + TART LINE telomeric 9932 10489 -3988 7 659 27 49 0 0 chrU 9740439 9740480 -308557 + AT_rich Low_complexity Low_complexity 1 41 0 7 659 913 34 0 8 chrU 9741102 9741222 -307815 - PROTOP_A DNA P -766 339 221 7 659 437 122 0 13 chrU 9741243 9741318 -307719 - DIVER_LTR LTR Pao 0 224 151 7 659 240 284 69 69 chrU 9741377 9741479 -307558 - BLASTOPIA_I LTR Gypsy -790 3691 3590 7 659 2685 163 26 8 chrU 9742266 9743326 -305711 + SAR_DM Satellite Satellite 1 1080 -551 7 659 3932 161 99 40 chrU 9743428 9744483 -304554 - HETA LINE telomeric -440 5641 4792 7 659 1834 146 43 29 chrU 9744591 9744963 -304074 - STALKER4_I LTR Gypsy -5805 725 235 7 659 31 58 0 0 chrU 9744964 9745016 -304021 + AT_rich Low_complexity Low_complexity 1 52 0 7 659 3264 49 2 18 chrU 9745104 9745543 -303494 - STALKER4_LTR LTR Gypsy -23 379 1 7 659 216 130 0 0 chrU 9745754 9745800 -303237 + (AATAG)n Simple_repeat Simple_repeat 2 47 0 7 659 1252 90 7 9 chrU 9745821 9746518 -302519 + (AATAG)n Simple_repeat Simple_repeat 1 696 0 7 659 1314 57 0 0 chrU 9746533 9746709 -302328 + (AATAG)n Simple_repeat Simple_repeat 2 177 0 7 659 494 67 13 0 chrU 9746742 9746817 -302220 + (AATAG)n Simple_repeat Simple_repeat 2 77 0 7 659 5877 8 0 3 chrU 9746917 9747584 -301453 - DOC LINE Jockey -2151 2574 1910 7 659 1670 251 2 10 chrU 9747585 9747979 -301058 - Gypsy2_I LTR Gypsy -3931 2204 1814 7 659 1312 114 71 65 chrU 9748080 9748389 -300648 + MAX_I LTR Pao 197 507 -7407 7 659 21 57 0 0 chrU 9748424 9748459 -300578 + AT_rich Low_complexity Low_complexity 1 35 0 7 659 4125 25 4 2 chrU 9748635 9749116 -299921 - Gypsy_LTR LTR Gypsy 0 482 1 7 659 1075 34 122 0 chrU 9749241 9749389 -299648 - NINJA_I LTR Pao -1847 4164 3999 7 659 577 62 0 48 chrU 9749366 9749450 -299587 - NINJA_I LTR Pao -3164 2847 2768 7 659 5067 34 67 1 chrU 9749446 9750303 -298734 - NINJA_I LTR Pao -3445 2566 1654 7 659 3436 191 9 10 chrU 9750409 9751181 -297856 + SAR_DM Satellite Satellite 267 1037 -435 7 659 4362 132 52 12 chrU 9751572 9752380 -296657 - TART LINE telomeric -7824 6653 5896 7 659 1250 145 32 64 chrU 9752377 9752627 -296410 - TART LINE telomeric -9085 5392 5151 7 659 4513 11 37 0 chrU 9752727 9753268 -295769 + IDEFIX_LTR LTR Gypsy 34 594 0 7 659 3423 45 112 17 chrU 9753268 9753788 -295249 - BATUMI_I LTR Pao -7364 599 31 7 659 782 0 0 0 chrU 9753889 9753980 -295057 - Copia_LTR LTR Copia -185 91 1 7 659 3677 0 0 0 chrU 9753980 9754387 -294650 - Copia_I LTR Copia 0 4593 4187 7 659 4899 3 0 2 chrU 9754382 9754950 -294087 - Copia_I LTR Copia -883 3710 3144 7 659 4155 55 170 3 chrU 9755050 9755649 -293388 - TART_B1 LINE telomeric -7299 3355 2657 7 659 1331 146 38 57 chrU 9755647 9755909 -293128 - TART LINE telomeric -10538 3939 3683 7 659 855 130 15 128 chrU 9755904 9756107 -292930 - TART LINE telomeric -11115 3362 3183 7 659 2825 150 96 27 chrU 9756241 9756824 -292213 - ROVER-I_DM LTR Gypsy -1276 5308 4686 7 659 3356 36 107 2 chrU 9756824 9757265 -291772 - Copia2_I LTR Copia -686 3476 2990 7 659 5558 2 0 0 chrU 9757370 9757980 -291057 + LSU-rRNA_Dme rRNA rRNA 1967 2576 -1324 7 659 4095 2 0 0 chrU 9757981 9758430 -290607 + R2_DM LINE R2 2851 3299 -308 7 659 3200 28 43 0 chrU 9758736 9759128 -289909 + PROTOP DNA P 1 409 -4071 7 659 3642 32 2 4 chrU 9759128 9759589 -289448 - MDG1_LTR LTR Gypsy 0 442 1 7 659 3802 98 81 105 chrU 9759711 9760622 -288415 - BATUMI_I LTR Pao -7074 889 1 7 659 1041 16 0 24 chrU 9760622 9760748 -288289 - BATUMI_I LTR Pao -679 7284 7162 7 659 7730 94 2 8 chrU 9760848 9761907 -287130 - Gypsy12_I LTR Gypsy -544 5002 3950 7 659 3245 219 75 34 chrU 9762019 9763064 -285973 + Gypsy12_LTR LTR Gypsy 920 2006 -330 7 659 3284 204 45 24 chrU 9763176 9764223 -284814 + SAR_DM Satellite Satellite 1 1068 -208 7 659 27 29 0 0 chrU 9764602 9764636 -284401 + AT_rich Low_complexity Low_complexity 1 34 0 7 659 1728 39 0 5 chrU 9764947 9765155 -283882 + NINJA_LTR LTR Pao 110 316 -1 7 659 1626 19 9 31 chrU 9765156 9765379 -283658 + NINJA_I LTR Pao 1 218 -5793 7 659 4594 46 0 3 chrU 9765481 9766052 -282985 + G2_DM LINE Jockey 2534 3102 0 7 659 22 70 0 0 chrU 9766085 9766128 -282909 + AT_rich Low_complexity Low_complexity 1 43 0 7 659 262 150 0 0 chrU 9766141 9766181 -282856 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 659 225 195 0 0 chrU 9766316 9766357 -282680 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2580 7 659 1545 6 0 0 chrU 9766369 9766539 -282498 - LSU-rRNA_Dme rRNA rRNA 0 3900 3731 7 659 46 0 0 0 chrU 9767247 9767293 -281744 + AT_rich Low_complexity Low_complexity 1 46 0 7 659 985 17 8 0 chrU 9767309 9767428 -281609 + PROTOP_A DNA P 199 318 -787 7 659 1924 44 0 0 chrU 9767426 9767697 -281340 + PROTOP DNA P 483 753 -3727 7 659 6466 5 19 0 chrU 9767797 9768594 -280443 + DM176_I LTR Gypsy 5609 6420 0 7 659 1880 13 0 92 chrU 9768594 9768855 -280182 + DM176_LTR LTR Gypsy 1 237 -270 7 659 996 165 86 50 chrU 9768984 9769340 -279697 - HETA LINE telomeric -5468 613 4 7 659 612 0 0 0 chrU 9769375 9769444 -279593 - TAHRE LINE telomeric -9 10454 10386 7 659 257 29 0 0 chrU 9769436 9769471 -279566 - TAHRE LINE telomeric -5 10458 10424 7 659 3053 140 9 11 chrU 9769471 9769998 -279039 - TAHRE LINE telomeric -7 10456 9931 7 659 2769 177 9 7 chrU 9770112 9771167 -277870 - SAR_DM Satellite Satellite -494 1057 1 7 659 9471 4 14 0 chrU 9771269 9772326 -276711 + DM1731_I LTR Copia 1314 2385 -1591 7 659 1142 77 101 10 chrU 9772430 9772639 -276398 + PROTOP_A DNA P 628 855 -250 7 659 3338 70 44 4 chrU 9772629 9773106 -275931 + PROTOP_A DNA P 610 1105 0 7 659 703 0 0 0 chrU 9773582 9773665 -275372 + DM1731_I LTR Copia 3894 3976 0 7 659 2838 33 0 0 chrU 9773665 9774001 -275036 + DM1731_LTR LTR Copia 1 336 0 7 659 2042 194 100 32 chrU 9774000 9774602 -274435 + SAR_DM Satellite Satellite 627 1269 -203 7 659 1054 43 0 7 chrU 9774498 9774638 -274399 - ARS406_DM Unknown Unknown -164 189 51 7 659 756 43 0 0 chrU 9774738 9774830 -274207 + DMCR1A LINE CR1 350 441 -4029 7 659 8350 22 23 7 chrU 9774798 9775794 -273243 + DMRT1A LINE R1 1075 2086 -3097 7 659 715 0 0 0 chrU 9775894 9775973 -273064 - Gypsy_I LTR Gypsy -6428 79 1 7 659 4099 29 4 2 chrU 9775971 9776452 -272585 - Gypsy_LTR LTR Gypsy 0 482 1 7 659 33 25 0 0 chrU 9776724 9776764 -272273 + AT_rich Low_complexity Low_complexity 1 40 0 7 659 508 122 100 0 chrU 9776820 9776910 -272127 - DNAREP1_DM LINE Penelope 0 594 496 7 659 3709 66 0 21 chrU 9777050 9777580 -271457 - IDEFIX_I LTR Gypsy -1821 3807 3289 7 659 3345 50 146 6 chrU 9777578 9778106 -270931 - IDEFIX_I LTR Gypsy -2485 3143 2542 7 659 4073 194 27 22 chrU 9778246 9779258 -269779 - SAR_DM Satellite Satellite -261 1211 195 7 659 2069 198 2 0 chrU 9779361 9779800 -269237 - ROVER-I_DM LTR Gypsy -335 6249 5810 7 659 1909 209 9 5 chrU 9779795 9780416 -268621 - ROVER-I_DM LTR Gypsy -1276 5308 4671 7 659 4317 180 16 24 chrU 9780521 9781555 -267482 - SAR_DM Satellite Satellite -255 1217 192 7 659 784 71 0 9 chrU 9781458 9781571 -267466 + ARS406_DM Unknown Unknown 1 112 -241 7 659 21 57 0 0 chrU 9781815 9781850 -267187 + AT_rich Low_complexity Low_complexity 1 35 0 7 659 1094 149 69 5 chrU 9781891 9782093 -266944 - DNAREP1_DM LINE Penelope -358 236 22 7 659 22 35 0 0 chrU 9782196 9782225 -266812 + AT_rich Low_complexity Low_complexity 1 29 0 7 659 1361 39 0 6 chrU 9782844 9783025 -266012 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 7 659 1532 40 5 8 chrU 9783036 9783868 -265169 + (TATAA)n Simple_repeat Simple_repeat 1 829 0 7 659 7845 53 55 0 chrU 9783979 9785030 -264007 + STALKER4_I LTR Gypsy 2095 3203 -3327 7 659 5616 2 0 0 chrU 9785132 9785745 -263292 + Invader1_I LTR Gypsy 1418 2030 -1156 7 659 3759 11 54 0 chrU 9785741 9786185 -262852 + Invader1_I LTR Gypsy 1182 1649 -1537 7 659 4784 105 76 39 chrU 9786285 9787122 -261915 + Gypsy12_I LTR Gypsy 48 915 -4631 7 659 1712 32 69 0 chrU 9787122 9787338 -261699 + PROTOP_A DNA P 1 231 -874 7 659 9159 20 3 0 chrU 9787438 9788491 -260546 - R1_DM LINE R1 -2722 2634 1579 7 659 2754 11 154 6 chrU 9788591 9788942 -260095 + R1_DM LINE R1 4954 5356 0 7 659 971 70 8 0 chrU 9788975 9789104 -259933 + R1_DM LINE R1 1 130 -5226 7 659 4169 41 52 0 chrU 9789102 9789644 -259393 + R1_DM LINE R1 577 1146 -4210 7 659 8784 31 4 0 chrU 9789744 9790797 -258240 + NINJA_I LTR Pao 4133 5189 -822 7 659 4844 3 0 0 chrU 9790897 9791463 -257574 - QUASIMODO_I LTR Gypsy -1210 4850 4285 7 659 361 24 0 0 chrU 9791462 9791504 -257533 - DMCR1A LINE CR1 -2791 1679 1638 7 659 180 0 0 0 chrU 9791506 9791526 -257511 + (CTATA)n Simple_repeat Simple_repeat 1 20 0 7 659 2847 60 98 0 chrU 9791529 9791927 -257110 - DMCR1A LINE CR1 -3056 1414 978 7 659 1882 14 0 0 chrU 9792050 9792272 -256765 + STALKER4_I LTR Gypsy 2755 2976 -3554 7 659 2075 45 3 43 chrU 9792261 9792563 -256474 + BATUMI_I LTR Pao 6995 7284 -679 7 659 2944 88 102 28 chrU 9792563 9793102 -255935 + BATUMI_I LTR Pao 1 579 -7384 7 659 3956 183 14 29 chrU 9793203 9794254 -254783 + SAR_DM Satellite Satellite 1 1035 -203 7 659 3077 0 3 6 chrU 9794354 9794706 -254331 + Copia_I LTR Copia 4243 4593 0 7 659 2377 4 0 0 chrU 9794706 9794982 -254055 + Copia_LTR LTR Copia 1 276 0 7 659 3050 45 94 0 chrU 9794982 9795406 -253631 - PROTOP DNA P -3830 650 185 7 659 28 48 0 0 chrU 9795675 9795717 -253320 + AT_rich Low_complexity Low_complexity 1 42 0 7 659 32 0 0 0 chrU 9796046 9796078 -252959 + AT_rich Low_complexity Low_complexity 1 32 0 7 659 3168 3 0 0 chrU 9796210 9796558 -252479 + SSU-rRNA_Dme rRNA rRNA 1 348 -1647 7 659 4148 192 17 19 chrU 9796658 9797675 -251362 - SAR_DM Satellite Satellite -263 1209 195 7 659 838 79 16 0 chrU 9797582 9797709 -251328 + ARS406_DM Unknown Unknown 1 129 -224 7 659 508 122 100 0 chrU 9797922 9798012 -251025 + DNAREP1_DM LINE Penelope 496 594 0 7 659 26 50 0 0 chrU 9798066 9798106 -250931 + AT_rich Low_complexity Low_complexity 1 40 0 7 659 21 71 0 0 chrU 9798130 9798172 -250865 + AT_rich Low_complexity Low_complexity 1 42 0 7 659 2042 43 4 8 chrU 9798604 9798860 -250177 + DIVER2_I LTR Pao 1212 1466 -2681 7 659 7974 30 50 35 chrU 9798960 9800011 -249026 - BATUMI_I LTR Pao -5302 2661 1596 7 659 4770 32 60 1 chrU 9800111 9800939 -248098 + MAX_I LTR Pao 2972 3848 -4066 7 659 2107 24 0 0 chrU 9800915 9801162 -247875 + MAX_I LTR Pao 4290 4536 -3378 7 659 4060 2 0 0 chrU 9801262 9801709 -247328 + QUASIMODO_LTR LTR Gypsy 212 658 0 7 659 4708 12 2 60 chrU 9801709 9802313 -246724 + QUASIMODO_I LTR Gypsy 1 569 -5491 7 659 3662 206 25 23 chrU 9802413 9803450 -245587 - SAR_DM Satellite Satellite -825 1038 1 7 659 8439 33 12 0 chrU 9803564 9804614 -244423 - MDG1_I LTR Gypsy -545 6051 4989 7 659 2389 38 20 0 chrU 9804714 9805006 -244031 + LSU-rRNA_Dme rRNA rRNA 2592 2889 -1011 7 659 5248 54 12 51 chrU 9805005 9805764 -243273 + LSU-rRNA_Dme rRNA rRNA 1227 1955 -1945 7 659 1695 5 5 0 chrU 9805864 9806061 -242976 - Copia_I LTR Copia -4395 198 1 7 659 2377 4 0 0 chrU 9806061 9806337 -242700 - Copia_LTR LTR Copia 0 276 1 7 659 454 77 51 0 chrU 9806337 9806411 -242626 + PROTOP DNA P 643 720 -3760 7 659 3281 47 51 4 chrU 9806460 9806914 -242123 + PROTOP_A DNA P 589 1063 -42 7 659 526 30 15 0 chrU 9807014 9807081 -241956 - NTS_DM Other Other -135 105 38 7 659 851 0 0 0 chrU 9807081 9807177 -241860 - NTS_DM Other Other -107 133 38 7 659 870 9 9 27 chrU 9807177 9807288 -241749 - NTS_DM Other Other -107 133 25 7 659 21 57 0 0 chrU 9807314 9807349 -241688 + AT_rich Low_complexity Low_complexity 1 35 0 7 659 1304 18 0 6 chrU 9807349 9807514 -241523 - NTS_DM Other Other -39 201 38 7 659 883 18 0 27 chrU 9807514 9807626 -241411 - NTS_DM Other Other -107 133 25 7 659 1593 30 0 5 chrU 9807678 9807880 -241157 - NTS_DM Other Other -39 201 1 7 659 1349 11 22 16 chrU 9807880 9808063 -240974 - NTS_DM Other Other 0 240 57 7 659 8116 17 37 0 chrU 9808163 9809138 -239899 - PROTOP_A DNA P -94 1011 1 7 659 1798 102 11 20 chrU 9809314 9809713 -239324 + QUASIMODO_LTR LTR Gypsy 130 589 -69 7 659 613 275 29 16 chrU 9810008 9810252 -238785 + TV1I LTR Gypsy 712 958 -5005 7 659 2964 0 0 3 chrU 9810461 9810801 -238236 + FW_DM LINE Jockey 4354 4692 0 7 659 1087 53 33 0 chrU 9810805 9810955 -238082 + ARS406_DM Unknown Unknown 35 189 -164 7 659 4405 236 22 24 chrU 9810857 9812655 -236382 - SAR_DM Satellite Satellite -203 1794 1 7 659 21 89 0 0 chrU 9813402 9813458 -235579 + AT_rich Low_complexity Low_complexity 1 56 0 7 659 29 47 0 0 chrU 9813496 9813539 -235498 + AT_rich Low_complexity Low_complexity 1 43 0 7 659 28 71 0 0 chrU 9813583 9813639 -235398 + AT_rich Low_complexity Low_complexity 1 56 0 7 659 242 35 0 0 chrU 9813779 9813808 -235229 - PROTOP_B DNA P -640 513 485 7 659 1972 111 85 23 chrU 9813908 9814518 -234519 - TART LINE telomeric -6845 7632 6985 7 659 423 75 88 15 chrU 9814518 9814586 -234451 - TAHRE LINE telomeric -11 10452 10380 7 659 1584 127 255 8 chrU 9814584 9814949 -234088 - TART LINE telomeric -3814 10663 10209 7 659 1813 35 146 3 chrU 9815058 9815333 -233704 - FW_DM LINE Jockey -4378 314 1 7 659 3796 35 0 13 chrU 9815341 9815799 -233238 + R1_DM LINE R1 1377 1828 -3528 7 659 2513 49 0 3 chrU 9815797 9816105 -232932 + R1_DM LINE R1 1317 1623 -3733 7 659 1804 172 61 83 chrU 9816206 9816980 -232057 - HETA LINE telomeric -5404 677 1 7 659 1450 99 4 16 chrU 9817006 9817252 -231785 - TAHRE LINE telomeric -8 10455 10213 7 659 3686 179 92 40 chrU 9817354 9818352 -230685 + HETA LINE telomeric 4573 5622 -459 7 659 21 89 0 0 chrU 9819431 9819487 -229550 + AT_rich Low_complexity Low_complexity 1 56 0 7 659 2317 4 0 7 chrU 9820169 9820447 -228590 + Copia_LTR LTR Copia 1 276 0 7 659 1953 4 0 36 chrU 9820447 9820697 -228340 + Copia_I LTR Copia 1 241 -4352 7 659 877 45 18 0 chrU 9820809 9820920 -228117 - CIRCE LINE Composite -5271 1085 973 7 659 5457 51 68 42 chrU 9821062 9821845 -227192 - CIRCE LINE Composite -5386 970 168 7 659 2433 115 16 19 chrU 9821960 9822993 -226044 + DMSAT6 Satellite Satellite 1 1030 -79 7 659 654 25 0 36 chrU 9823093 9823177 -225860 - NTS_DM Other Other -135 105 25 7 659 22 56 0 0 chrU 9823203 9823239 -225798 + AT_rich Low_complexity Low_complexity 1 36 0 7 659 269 125 0 0 chrU 9823252 9823292 -225745 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 659 262 150 0 0 chrU 9823335 9823375 -225662 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 659 262 150 0 0 chrU 9823427 9823467 -225570 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 659 22 56 0 0 chrU 9823472 9823508 -225529 + AT_rich Low_complexity Low_complexity 1 36 0 7 659 5117 2 2 0 chrU 9823580 9824140 -224897 - LSU-rRNA_Dme rRNA rRNA 0 3900 3340 7 659 9564 1 0 1 chrU 9824240 9825287 -223750 + SSU-rRNA_Dme rRNA rRNA 88 1133 -862 7 659 4963 0 0 4 chrU 9825387 9825937 -223100 + BS2 LINE Jockey 4174 4721 0 7 659 27 0 0 0 chrU 9825937 9825964 -223073 + AT_rich Low_complexity Low_complexity 1 27 0 7 659 4100 6 0 0 chrU 9825964 9826434 -222603 - QUASIMODO_I LTR Gypsy -2561 3499 3030 7 659 8580 17 6 3 chrU 9826534 9827581 -221456 - QUASIMODO_I LTR Gypsy -4339 1721 672 7 659 4144 246 14 6 chrU 9827681 9828728 -220309 - G_DM LINE Jockey -1082 3264 2209 7 659 3688 202 19 30 chrU 9828830 9829863 -219174 - SAR_DM Satellite Satellite -836 1021 1 7 660 27 0 0 0 chrU 9830534 9830561 -218476 + AT_rich Low_complexity Low_complexity 1 27 0 7 660 952 62 0 0 chrU 9832267 9832395 -216642 + ARS406_DM Unknown Unknown 62 189 -164 7 660 4066 202 12 20 chrU 9832304 9833313 -215724 - SAR_DM Satellite Satellite -216 1256 256 7 660 33 25 0 0 chrU 9834245 9834285 -214752 + AT_rich Low_complexity Low_complexity 1 40 0 7 660 26 64 0 0 chrU 9834306 9834353 -214684 + AT_rich Low_complexity Low_complexity 1 47 0 7 660 5161 2 0 0 chrU 9834559 9835137 -213900 - DOC LINE Jockey -2416 2309 1732 7 660 4222 8 0 0 chrU 9835129 9835604 -213433 - DOC LINE Jockey -1323 3402 2928 7 660 611 0 45 34 chrU 9835704 9835792 -213245 + NTS_DM Other Other 152 240 0 7 660 1922 4 17 13 chrU 9835792 9836031 -213006 + NTS_DM Other Other 1 240 0 7 660 1853 13 8 25 chrU 9836031 9836275 -212762 + NTS_DM Other Other 1 240 0 7 660 1859 4 21 17 chrU 9836275 9836514 -212523 + NTS_DM Other Other 1 240 0 7 660 1751 30 17 17 chrU 9836514 9836749 -212288 + NTS_DM Other Other 1 235 -5 7 660 4615 0 0 0 chrU 9836849 9837382 -211655 - LSU-rRNA_Dme rRNA rRNA -2962 938 406 7 660 4712 15 0 4 chrU 9837356 9837894 -211143 - R2_DM LINE R2 -2319 1288 753 7 660 1640 93 4 31 chrU 9838014 9838270 -210767 - BATUMI_I LTR Pao -7714 249 1 7 660 2150 32 3 37 chrU 9838270 9838564 -210473 - BATUMI_I LTR Pao -679 7284 7001 7 660 254 210 12 12 chrU 9838572 9838654 -210383 + Invader1_I LTR Gypsy 2488 2569 -617 7 660 8827 22 35 0 chrU 9839139 9840184 -208853 - FW_DM LINE Jockey -616 4076 2995 7 660 511 60 95 0 chrU 9840313 9840397 -208640 + MAX_I LTR Pao 824 915 -6999 7 660 280 210 16 0 chrU 9840533 9840595 -208442 + MAX_I LTR Pao 1101 1163 -6751 7 660 1792 118 87 234 chrU 9840596 9841328 -207709 + MAX_I LTR Pao 939 1563 -6351 7 660 808 315 35 33 chrU 9841430 9841523 -207514 - Gypsy4_I LTR Gypsy -3524 3488 3288 7 660 1455 47 19 0 chrU 9841523 9841737 -207300 - TLD2 Unknown Unknown 0 218 1 7 660 808 315 35 33 chrU 9841737 9842180 -206857 - Gypsy4_I LTR Gypsy -3524 3287 2320 7 660 3826 7 7 16 chrU 9842572 9843022 -206015 + DM1731_I LTR Copia 3522 3967 -9 7 660 369 167 25 13 chrU 9843092 9843171 -205866 - ROVER-I_DM LTR Gypsy -6504 80 1 7 660 1178 72 98 16 chrU 9843217 9843400 -205637 - ROVER-LTR_DM LTR Gypsy -124 243 46 7 660 4325 6 2 0 chrU 9843716 9844211 -204826 + DOC LINE Jockey 4226 4721 -4 7 660 34 24 0 0 chrU 9844231 9844272 -204765 + AT_rich Low_complexity Low_complexity 1 41 0 7 660 2329 38 0 0 chrU 9844860 9845148 -203889 - MDG1_I LTR Gypsy -788 5808 5521 7 660 4665 80 38 1 chrU 9845164 9845903 -203134 - MDG1_I LTR Gypsy -1176 5437 4540 7 660 1598 107 0 0 chrU 9846003 9846228 -202809 - Gypsy12_I LTR Gypsy -3488 2058 1834 7 660 3407 98 110 0 chrU 9846227 9846729 -202308 - Gypsy12_I LTR Gypsy -3362 2184 1628 7 660 1887 101 32 22 chrU 9846731 9847046 -201991 - Gypsy12_LTR LTR Gypsy -144 2192 1875 7 660 3474 247 6 25 chrU 9848289 9849302 -199735 + QUASIMODO_I LTR Gypsy 2245 3238 -2822 7 660 703 0 0 0 chrU 9849432 9849528 -199509 + FW_DM LINE Jockey 4596 4691 -1 7 660 2214 19 64 0 chrU 9850575 9850841 -198196 + DIVER2_I LTR Pao 3807 4089 -58 7 660 1268 33 0 0 chrU 9850845 9850997 -198040 + DIVER2_LTR LTR Pao 234 385 0 7 660 918 0 0 0 chrU 9851717 9851817 -197220 + HOBO DNA hAT 805 904 -2112 7 660 4549 0 0 10 chrU 9851815 9852319 -196718 + HOBO DNA hAT 2518 3016 0 7 660 3889 4 0 0 chrU 9852859 9853311 -195726 - DM176_I LTR Gypsy -603 5817 5366 7 660 4828 10 46 0 chrU 9853311 9853901 -195136 - DM176_I LTR Gypsy -4705 1715 1099 7 660 1744 28 83 0 chrU 9854282 9854499 -194538 + PROTOP DNA P 1 235 -4245 7 660 3408 22 49 0 chrU 9854499 9854907 -194130 - ROO_LTR LTR Pao 0 428 1 7 660 1144 22 0 0 chrU 9854907 9855043 -193994 - ROO_I LTR Pao 0 8256 8121 7 660 3964 190 18 21 chrU 9855143 9856134 -192903 - SAR_DM Satellite Satellite -428 1044 57 7 660 810 273 26 13 chrU 9855868 9856176 -192861 + XDMR_DM Unknown Unknown 6 317 -43 7 660 527 0 0 15 chrU 9856285 9856353 -192684 - Copia_LTR LTR Copia -209 67 1 7 660 3650 2 0 0 chrU 9856356 9856763 -192274 - Copia_I LTR Copia -2 4591 4185 7 660 4959 0 0 0 chrU 9856757 9857324 -191713 - Copia_I LTR Copia -1470 3123 2557 7 660 3172 38 0 5 chrU 9857427 9857829 -191208 - Invader2_I LTR Gypsy -1462 3130 2731 7 660 1817 65 107 0 chrU 9857825 9858087 -190950 - TART LINE telomeric -9178 5299 5010 7 660 1370 157 4 39 chrU 9858092 9858464 -190573 - TART LINE telomeric -10448 4029 3831 7 660 2561 45 0 0 chrU 9858569 9858881 -190156 + TART_B1 LINE telomeric 3317 3628 -7026 7 660 4990 53 28 21 chrU 9858943 9859611 -189426 + TART LINE telomeric 1 673 -13804 7 660 2007 88 74 3 chrU 9859867 9860165 -188872 - MDG1_LTR LTR Gypsy -30 412 94 7 660 372 88 0 0 chrU 9860167 9860224 -188813 + (TTA)n Simple_repeat Simple_repeat 3 59 0 7 660 3975 232 10 33 chrU 9860861 9861892 -187145 + ROVER-I_DM LTR Gypsy 1660 2666 -3918 7 660 1341 39 50 0 chrU 9861993 9862172 -186865 + MAX_I LTR Pao 7679 7866 -48 7 660 704 330 10 22 chrU 9862249 9862562 -186475 + MICROPIA_I LTR Gypsy 1971 2279 -2197 7 660 1088 339 6 15 chrU 9862567 9863034 -186003 + MICROPIA_I LTR Gypsy 1999 2461 -2015 7 660 533 130 11 0 chrU 9863767 9863859 -185178 - DNAREP1_DM LINE Penelope -450 144 52 7 660 8038 43 59 18 chrU 9864275 9865314 -183723 - BATUMI_I LTR Pao -2178 5785 4705 7 660 3616 0 0 2 chrU 9865428 9865831 -183206 - STALKER4_LTR LTR Gypsy 0 402 1 7 660 2669 181 11 27 chrU 9865834 9866454 -182583 + SAR_DM Satellite Satellite 507 1116 -356 7 660 2042 0 4 0 chrU 9866554 9866783 -182254 - DM1731_I LTR Copia -3746 230 1 7 660 2813 36 0 0 chrU 9866783 9867119 -181918 - DM1731_LTR LTR Copia 0 336 1 7 660 2176 14 77 11 chrU 9867119 9867404 -181633 + TAHRE LINE telomeric 863 1166 -9297 7 660 1303 19 0 19 chrU 9867419 9867579 -181458 + DOC2_DM LINE Jockey 7 163 -4630 7 660 3218 27 55 0 chrU 9867895 9868297 -180740 + PROTOP_A DNA P 1 424 -681 7 660 3744 18 0 2 chrU 9868299 9868734 -180303 + PROTOP_A DNA P 1 434 -671 7 660 5176 14 2 0 chrU 9868834 9869424 -179613 + Gypsy6_I LTR Gypsy 476 1066 -5946 7 660 3997 9 2 0 chrU 9869419 9869874 -179163 + Gypsy6_I LTR Gypsy 1616 2071 -4941 7 660 465 54 0 0 chrU 9869974 9870030 -179007 - DIVER2_LTR LTR Pao -329 56 1 7 660 3473 38 12 0 chrU 9870030 9870454 -178583 - DIVER2_I LTR Pao 0 4147 3719 7 660 366 44 0 253 chrU 9870431 9870522 -178515 - DIVER2_I LTR Pao -2572 1575 1508 7 660 23 0 0 0 chrU 9870531 9870554 -178483 + AT_rich Low_complexity Low_complexity 1 23 0 7 660 575 255 19 19 chrU 9871347 9871555 -177482 + TV1I LTR Gypsy 712 919 -5044 7 660 834 284 64 21 chrU 9872517 9872891 -176146 - Copia_I LTR Copia -2314 2279 1890 7 660 3375 22 8 0 chrU 9872891 9873291 -175746 + PROTOP_A DNA P 1 403 -702 7 660 3421 195 36 19 chrU 9873391 9874268 -174769 + SAR_DM Satellite Satellite 1 1011 -318 7 660 763 73 137 0 chrU 9874268 9874392 -174645 - ARS406_DM Unknown Unknown -200 153 13 7 660 3421 195 36 19 chrU 9874392 9874429 -174608 + SAR_DM Satellite Satellite 1012 1055 -274 7 660 3596 39 11 11 chrU 9874549 9875017 -174020 + BATUMI_I LTR Pao 6427 6894 -1069 7 660 4374 36 32 7 chrU 9875029 9875567 -173470 - BATUMI_I LTR Pao -1935 6028 5478 7 660 2558 0 0 0 chrU 9875667 9875954 -173083 - FW_DM LINE Jockey -4045 647 361 7 660 1982 117 78 3 chrU 9875953 9876297 -172740 - IDEFIX_I LTR Gypsy -4277 1351 982 7 660 1674 85 0 12 chrU 9876273 9876524 -172513 - IDEFIX_I LTR Gypsy -4764 864 617 7 660 1213 44 100 0 chrU 9876545 9876705 -172332 - PROTOP_A DNA P 0 1105 930 7 660 4070 190 21 33 chrU 9876805 9877834 -171203 + SAR_DM Satellite Satellite 1 1016 -202 7 660 623 429 13 86 chrU 9877699 9878082 -170955 - XDMR_DM Unknown Unknown 0 360 6 7 660 4218 181 19 24 chrU 9877954 9878977 -170060 + SAR_DM Satellite Satellite 195 1211 -261 7 660 3549 212 20 19 chrU 9879079 9880116 -168921 + SAR_DM Satellite Satellite 1 1038 -225 7 660 2802 143 351 20 chrU 9880216 9881253 -167784 - TART LINE telomeric -4391 10086 8944 7 660 5296 0 0 0 chrU 9881353 9881944 -167093 + FW_DM LINE Jockey 4102 4692 0 7 660 32 0 0 0 chrU 9882022 9882054 -166983 + AT_rich Low_complexity Low_complexity 1 32 0 7 660 1810 10 0 0 chrU 9882186 9882389 -166648 + SSU-rRNA_Dme rRNA rRNA 1 203 -1792 7 660 2788 39 0 0 chrU 9882503 9882839 -166198 - DM1731_LTR LTR Copia 0 336 1 7 660 2883 180 74 12 chrU 9882838 9883525 -165512 + SAR_DM Satellite Satellite 271 1000 -472 7 660 9064 9 0 2 chrU 9883651 9884660 -164377 + BATUMI_I LTR Pao 4315 5321 -2642 7 660 674 317 34 32 chrU 9884979 9885687 -163350 - GTWIN_I LTR Gypsy -2298 3562 2986 7 660 754 57 0 0 chrU 9885615 9885720 -163317 - TLD2 Unknown Unknown 0 218 114 7 660 8319 28 0 5 chrU 9885895 9886930 -162107 - IDEFIX_I LTR Gypsy -1730 3898 2869 7 660 3115 16 3 0 chrU 9887030 9887397 -161640 - QUASIMODO_LTR LTR Gypsy -226 432 65 7 660 5876 16 3 0 chrU 9887396 9888065 -160972 - DMRT1A LINE R1 0 5183 4513 7 660 4585 0 0 0 chrU 9888165 9888667 -160370 + NOMAD_LTR LTR Gypsy 17 518 0 7 660 21 57 0 0 chrU 9888804 9888839 -160198 + AT_rich Low_complexity Low_complexity 1 35 0 7 660 1159 134 64 10 chrU 9888880 9889084 -159953 - DNAREP1_DM LINE Penelope -358 236 22 7 660 8435 16 16 1 chrU 9889300 9890335 -158702 + QUASIMODO_I LTR Gypsy 3408 4458 -1602 7 660 692 23 11 11 chrU 9890435 9890509 -158528 - DM412B_LTR LTR Gypsy -6513 384 311 7 660 5018 11 2 2 chrU 9890509 9891080 -157957 - DM412B_LTR LTR Gypsy 0 571 1 7 660 2254 0 0 85 chrU 9891080 9891239 -157798 - DM176_I LTR Gypsy -5745 675 537 7 660 208 28 26 53 chrU 9891239 9891277 -157760 + (TTA)n Simple_repeat Simple_repeat 3 39 0 7 660 2254 0 0 85 chrU 9891277 9891470 -157567 - DM176_I LTR Gypsy -5884 536 353 7 660 3967 205 23 28 chrU 9891576 9892605 -156432 - SAR_DM Satellite Satellite -314 1023 1 7 660 4669 25 5 0 chrU 9892718 9893277 -155760 + DOC2_DM LINE Jockey 891 1452 -3341 7 660 4063 5 0 0 chrU 9893295 9893739 -155298 + DMRT1A LINE R1 1 444 -4739 7 660 575 35 0 11 chrU 9893839 9893926 -155111 + NTS_DM Other Other 116 201 -39 7 660 907 9 0 27 chrU 9893978 9894090 -154947 + NTS_DM Other Other 25 133 -107 7 660 1304 18 0 6 chrU 9894090 9894255 -154782 + NTS_DM Other Other 38 201 -39 7 660 21 57 0 0 chrU 9894255 9894290 -154747 + AT_rich Low_complexity Low_complexity 1 35 0 7 660 870 9 9 27 chrU 9894316 9894427 -154610 + NTS_DM Other Other 25 133 -107 7 660 1450 25 20 20 chrU 9894427 9894630 -154407 + NTS_DM Other Other 38 240 0 7 660 1835 17 17 17 chrU 9894630 9894870 -154167 + NTS_DM Other Other 1 240 0 7 660 1841 0 0 0 chrU 9896105 9896306 -152731 + NOMAD_I LTR Gypsy 6372 6572 0 7 660 3663 5 0 0 chrU 9896306 9896711 -152326 + NOMAD_LTR LTR Gypsy 114 518 0 7 660 1254 54 86 0 chrU 9896711 9897010 -152027 - PROTOP_B DNA P -402 751 520 7 660 1083 64 0 0 chrU 9896997 9897138 -151899 - PROTOP_A DNA P -806 299 159 7 660 1493 18 0 0 chrU 9897238 9897407 -151630 + DMRT1B LINE R1 5015 5183 0 7 660 2619 104 65 16 chrU 9898371 9898799 -150238 + HETA LINE telomeric 3226 3674 -2407 7 660 3877 94 15 10 chrU 9898807 9899399 -149638 + TART LINE telomeric 9005 9599 -4878 7 660 3965 182 123 11 chrU 9899514 9900531 -148506 + HETA LINE telomeric 4473 5603 -478 7 660 1311 13 13 6 chrU 9900636 9900793 -148244 + MICROPIA_LTR LTR Gypsy 319 476 0 7 660 7442 14 37 2 chrU 9900793 9901668 -147369 - ACCORD2_I LTR Gypsy -6128 1084 180 7 660 6012 17 1 4 chrU 9902101 9902796 -146241 - SSU-rRNA_Dme rRNA rRNA 0 1995 1303 7 660 1541 73 0 14 chrU 9902900 9903122 -145915 - IDEFIX_I LTR Gypsy -4976 652 434 7 660 1968 133 6 9 chrU 9903119 9903452 -145585 - IDEFIX_I LTR Gypsy -5346 282 1 7 660 25 31 0 0 chrU 9903655 9903687 -145350 + AT_rich Low_complexity Low_complexity 1 32 0 7 660 360 83 0 0 chrU 9903872 9903932 -145105 - IDEFIX_LTR LTR Gypsy 0 594 535 7 660 8051 44 11 13 chrU 9904032 9905061 -143976 - R1_DM LINE R1 -4137 1219 193 7 660 4153 6 0 4 chrU 9905163 9905630 -143407 + GTWIN_LTR LTR Gypsy 31 495 0 7 660 4496 7 177 0 chrU 9905630 9906194 -142843 + GTWIN_I LTR Gypsy 1 664 -5757 7 660 5311 26 27 8 chrU 9906662 9907325 -141712 + PROTOP_A DNA P 1 676 -429 7 660 288 171 14 28 chrU 9907426 9907498 -141539 - ARS406_DM Unknown Unknown -282 71 1 7 660 2262 204 19 9 chrU 9907435 9908456 -140581 + SAR_DM Satellite Satellite 1 1031 -645 7 660 982 23 0 58 chrU 9909085 9909223 -139814 - NINJA_LTR LTR Pao -187 130 1 7 660 706 0 0 0 chrU 9909686 9909763 -139274 + LSU-rRNA_Dme rRNA rRNA 3824 3900 0 7 660 22 56 0 0 chrU 9909835 9909871 -139166 + AT_rich Low_complexity Low_complexity 1 36 0 7 660 262 150 0 0 chrU 9909876 9909916 -139121 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 262 150 0 0 chrU 9909968 9910008 -139029 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 262 150 0 0 chrU 9910060 9910100 -138937 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 269 125 0 0 chrU 9910143 9910183 -138854 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 22 56 0 0 chrU 9910196 9910232 -138805 + AT_rich Low_complexity Low_complexity 1 36 0 7 660 899 28 0 0 chrU 9910263 9910371 -138666 + NTS_DM Other Other 26 133 -107 7 660 1304 18 0 6 chrU 9910371 9910536 -138501 + NTS_DM Other Other 38 201 -39 7 660 907 9 0 27 chrU 9910588 9910700 -138337 + NTS_DM Other Other 25 133 -107 7 660 23 0 0 0 chrU 9911426 9911449 -137588 + AT_rich Low_complexity Low_complexity 1 23 0 7 660 1598 33 0 99 chrU 9911593 9911826 -137211 + DIVER2_I LTR Pao 1366 1575 -2572 7 660 8785 7 20 0 chrU 9911946 9912976 -136061 - DM176_I LTR Gypsy -1564 4856 3806 7 660 2414 95 20 18 chrU 9913078 9913528 -135509 + DMSAT6 Satellite Satellite 17 467 -3 7 660 2648 81 18 14 chrU 9913539 9914105 -134932 + DMSAT6 Satellite Satellite 1 567 0 7 660 1912 242 52 80 chrU 9914205 9915211 -133826 + Gypsy12_LTR LTR Gypsy 29 971 -1309 7 660 2096 16 35 0 chrU 9915334 9915590 -133447 + Invader3_I LTR Gypsy 4624 4888 0 7 660 1962 54 3 111 chrU 9915590 9915924 -133113 + Invader3_LTR LTR Gypsy 1 298 0 7 660 443 312 20 10 chrU 9916116 9916317 -132720 + TV1I LTR Gypsy 756 958 -5005 7 660 550 0 0 15 chrU 9916463 9916528 -132509 + LSU-rRNA_Dme rRNA rRNA 1725 1788 -2112 7 660 7726 1 0 0 chrU 9916572 9917417 -131620 + LSU-rRNA_Dme rRNA rRNA 1788 2632 -1268 7 660 620 0 27 0 chrU 9917417 9917492 -131545 + R1_DM LINE R1 1 77 -5279 7 660 2788 29 0 25 chrU 9917592 9917947 -131090 - DM412 LTR Gypsy -6551 346 1 7 660 4091 17 0 10 chrU 9917629 9918110 -130927 - T412LTR LTR LTR 0 481 6 7 660 4291 2 0 0 chrU 9918126 9918621 -130416 + DM412 LTR Gypsy 6011 6505 -392 7 660 3303 195 54 37 chrU 9918721 9919739 -129298 - TART_B1 LINE telomeric -9071 1583 478 7 660 553 169 15 7 chrU 9919878 9920015 -129022 - PROTOP_B DNA P -705 448 311 7 660 837 104 59 0 chrU 9920086 9920221 -128816 + DNAREP1_DM LINE Penelope 8 150 -444 7 660 23 33 0 0 chrU 9920520 9920550 -128487 + AT_rich Low_complexity Low_complexity 1 30 0 7 660 2397 0 0 7 chrU 9920979 9921252 -127785 + BATUMI_I LTR Pao 7693 7963 0 7 660 2099 48 3 30 chrU 9921252 9921548 -127489 + BATUMI_I LTR Pao 7002 7289 -674 7 660 26 30 0 0 chrU 9921648 9921681 -127356 + AT_rich Low_complexity Low_complexity 1 33 0 7 660 1109 56 18 12 chrU 9921844 9922008 -127029 - PROTOP_A DNA P -592 513 349 7 660 3212 164 29 70 chrU 9922108 9923136 -125901 + TAHRE LINE telomeric 17 1205 -4876 7 660 3008 153 58 55 chrU 9923281 9924264 -124773 - TAHRE LINE telomeric -2475 7988 7400 7 660 34 24 0 0 chrU 9924406 9924447 -124590 + AT_rich Low_complexity Low_complexity 1 41 0 7 660 24 96 0 0 chrU 9924593 9924666 -124371 + AT_rich Low_complexity Low_complexity 1 73 0 7 660 4114 199 12 17 chrU 9925499 9926517 -122520 + SAR_DM Satellite Satellite 218 1230 -242 7 660 3823 189 21 24 chrU 9926620 9927554 -121483 + SAR_DM Satellite Satellite 333 1264 -208 7 660 668 65 0 0 chrU 9927554 9927647 -121390 - ARS406_DM Unknown Unknown -195 158 66 7 660 3771 7 0 0 chrU 9927747 9928174 -120863 + G2_DM LINE Jockey 2673 3099 -3 7 660 3908 37 161 0 chrU 9928173 9928774 -120263 + G2_DM LINE Jockey 1761 2458 -644 7 660 3603 66 70 0 chrU 9928876 9929549 -119488 + PROTOP_A DNA P 521 1105 0 7 660 1184 6 0 12 chrU 9930001 9930161 -118876 + DOC LINE Jockey 4565 4722 -3 7 660 4001 37 42 2 chrU 9930479 9931027 -118010 - IDEFIX_I LTR Gypsy -71 5557 4988 7 660 4113 6 0 2 chrU 9931129 9931617 -117420 + STALKER4_I LTR Gypsy 3040 3526 -3004 7 660 4866 16 0 0 chrU 9931600 9932153 -116884 + STALKER4_I LTR Gypsy 3649 4201 -2329 7 660 4312 2 0 0 chrU 9932253 9932735 -116302 - FW_DM LINE Jockey -2693 1999 1518 7 660 4528 6 21 4 chrU 9932757 9933278 -115759 + DM1731_I LTR Copia 1 530 -3446 7 660 1233 130 162 11 chrU 9933389 9933851 -115186 - TART LINE telomeric -4831 9646 9115 7 660 3526 20 0 0 chrU 9933859 9934267 -114770 - PROTOP_A DNA P -697 408 1 7 660 478 221 23 0 chrU 9934268 9934399 -114638 - IDEFIX_I LTR Gypsy -4677 951 818 7 660 551 0 124 12 chrU 9934506 9934667 -114370 + (GA)n Simple_repeat Simple_repeat 2 180 0 7 660 759 117 47 6 chrU 9934649 9934821 -114216 + GA-rich Low_complexity Low_complexity 1 179 0 7 660 600 0 124 6 chrU 9934801 9934962 -114075 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 660 767 75 0 9 chrU 9935628 9935735 -113302 - BATUMI_I LTR Pao -7857 106 1 7 660 2093 35 3 34 chrU 9935735 9936027 -113010 - BATUMI_I LTR Pao -679 7284 7002 7 660 1514 56 5 23 chrU 9936042 9936650 -112387 + (TTATA)n Simple_repeat Simple_repeat 1 596 0 7 660 775 0 0 0 chrU 9936753 9936838 -112199 + LSU-rRNA_Dme rRNA rRNA 3816 3900 0 7 660 22 56 0 0 chrU 9936910 9936946 -112091 + AT_rich Low_complexity Low_complexity 1 36 0 7 660 249 150 0 0 chrU 9936951 9936991 -112046 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 262 150 0 0 chrU 9937043 9937083 -111954 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 262 150 0 0 chrU 9937135 9937175 -111862 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 269 125 0 0 chrU 9937218 9937258 -111779 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 660 22 56 0 0 chrU 9937271 9937307 -111730 + AT_rich Low_complexity Low_complexity 1 36 0 7 660 877 9 0 35 chrU 9937333 9937446 -111591 + NTS_DM Other Other 25 133 -107 7 660 1304 18 0 6 chrU 9937446 9937611 -111426 + NTS_DM Other Other 38 201 -39 7 660 907 9 0 27 chrU 9937663 9937775 -111262 + NTS_DM Other Other 25 133 -107 7 660 3809 193 16 23 chrU 9937887 9938899 -110138 + SAR_DM Satellite Satellite 1 1005 -203 7 660 4856 7 0 0 chrU 9938999 9939549 -109488 + FW_DM LINE Jockey 4143 4692 0 7 660 3324 47 0 19 chrU 9939580 9940011 -109026 - G5A_DM LINE Jockey 0 2841 2419 7 660 2400 55 10 3 chrU 9940122 9940435 -108602 + R2_DM LINE R2 2026 2340 -1267 7 660 2288 27 68 0 chrU 9940434 9940726 -108311 - G2_DM LINE Jockey -13 3089 2778 7 660 2938 55 112 0 chrU 9940744 9941145 -107892 + R2_DM LINE R2 3094 3539 -68 7 660 200 0 100 0 chrU 9941864 9941904 -107133 + (TA)n Simple_repeat Simple_repeat 1 44 0 7 660 4136 203 11 18 chrU 9942372 9943389 -105648 - SAR_DM Satellite Satellite -216 1256 247 7 660 4543 40 107 0 chrU 9943491 9944116 -104921 - PROTOP DNA P -3788 692 1 7 660 2781 205 60 17 chrU 9944611 9945633 -103404 + SAR_DM Satellite Satellite 1 1065 -203 7 660 4613 48 17 17 chrU 9945733 9946755 -102282 + PROTOP DNA P 171 1056 -49 7 660 1172 68 18 11 chrU 9946855 9947108 -101929 + BATUMI_I LTR Pao 7601 7963 0 7 660 1895 102 72 3 chrU 9947110 9947414 -101623 - MDG1_LTR LTR Gypsy -24 418 94 7 660 405 70 0 0 chrU 9947416 9947473 -101564 + (TTA)n Simple_repeat Simple_repeat 3 59 0 7 660 442 84 5 2 chrU 9947477 9947563 -101474 - MDG1_I LTR Gypsy 0 6596 6530 7 660 1867 49 4 50 chrU 9947563 9947843 -101194 - MDG3_LTR LTR Gypsy 0 267 1 7 660 285 0 0 0 chrU 9947843 9947877 -101160 - MDG3_I LTR Gypsy 0 4986 4953 7 660 3743 7 0 0 chrU 9947977 9948437 -100600 - ROVER-I_DM LTR Gypsy -4418 2166 1707 7 660 4888 3 0 0 chrU 9948432 9948998 -100039 - ROVER-I_DM LTR Gypsy -5062 1522 957 7 660 1536 42 0 0 chrU 9949098 9949433 -99604 + (TATAA)n Simple_repeat Simple_repeat 1 335 0 7 660 932 49 0 0 chrU 9949442 9949565 -99472 - HETA LINE telomeric -4357 1724 1602 7 660 3943 41 0 19 chrU 9949592 9950119 -98918 - HETA LINE telomeric -4944 1137 621 7 660 3397 103 75 4 chrU 9950219 9951240 -97797 + Gypsy12_I LTR Gypsy 1236 2329 -3217 7 660 7141 36 15 42 chrU 9951344 9952360 -96677 - BATUMI_I LTR Pao -5177 2786 1799 7 660 264 59 0 0 chrU 9952823 9952857 -96180 + (TTG)n Simple_repeat Simple_repeat 2 35 0 7 660 1727 58 0 0 chrU 9953057 9953283 -95754 + PROTOP DNA P 74 299 -4181 7 660 1163 53 130 0 chrU 9953270 9953478 -95559 + PROTOP DNA P 522 757 -3723 7 660 4896 9 41 4 chrU 9953582 9954603 -94434 - DM297_I LTR Gypsy -811 5356 4298 7 660 23 0 0 0 chrU 9954720 9954743 -94294 + AT_rich Low_complexity Low_complexity 1 23 0 7 660 6146 31 39 0 chrU 9954892 9955724 -93313 - IDEFIX_I LTR Gypsy -157 5471 4608 7 660 5268 15 44 3 chrU 9955824 9956482 -92555 - DMRT1B LINE R1 -1584 3599 2915 7 660 3082 11 0 0 chrU 9956476 9956844 -92193 - DMRT1B LINE R1 -2373 2810 2443 7 660 2446 19 3 13 chrU 9956948 9957260 -91777 + BATUMI_I LTR Pao 6693 7001 -962 7 660 9103 226 75 71 chrU 9957098 9960204 -88833 - BATUMI_I LTR Pao -1063 6851 3492 7 660 7173 40 58 2 chrU 9960304 9961324 -87713 + IDEFIX_I LTR Gypsy 4338 5414 -214 7 82 4517 9 0 0 chrU 9961424 9961950 -87087 + DMRT1B LINE R1 4658 5183 0 7 661 3988 0 0 0 chrU 9961983 9962442 -86595 + DMRT1A LINE R1 3078 3536 -1647 7 661 2733 55 0 3 chrU 9962543 9962927 -86110 - BATUMI_I LTR Pao -278 7685 7303 7 661 4244 48 7 12 chrU 9962941 9963529 -85508 + BATUMI_I LTR Pao 6417 7001 -962 7 661 7835 20 0 40 chrU 9963662 9964681 -84356 - CIRCE LINE Composite -1724 4632 3655 7 661 2478 94 39 24 chrU 9964784 9965799 -83238 - DMSAT6 Satellite Satellite -94 1031 1 7 661 3522 200 22 21 chrU 9965900 9966869 -82168 + SAR_DM Satellite Satellite 295 1264 -208 7 661 1030 55 7 0 chrU 9966772 9966917 -82120 - ARS406_DM Unknown Unknown -164 189 44 7 661 565 106 9 46 chrU 9967020 9967129 -81908 - Gypsy_LTR LTR Gypsy -287 195 91 7 661 2952 145 69 10 chrU 9967129 9968024 -81013 - Gypsy_I LTR Gypsy -1110 5397 4450 7 661 8155 32 8 7 chrU 9968138 9969157 -79880 + MAX_I LTR Pao 5250 6269 -1645 7 661 4836 26 6 19 chrU 9969257 9969934 -79103 + IDEFIX_I LTR Gypsy 4961 5628 0 7 661 519 16 0 0 chrU 9969934 9969998 -79039 + IDEFIX_LTR LTR Gypsy 1 64 -530 7 661 1037 27 7 7 chrU 9969997 9970145 -78892 + IDEFIX_LTR LTR Gypsy 447 594 0 7 661 256 155 85 17 chrU 9970378 9970437 -78600 + Copia_I LTR Copia 4451 4513 -80 7 661 34 24 0 0 chrU 9971204 9971245 -77792 + AT_rich Low_complexity Low_complexity 1 41 0 7 661 487 118 64 0 chrU 9971254 9971364 -77673 - TART LINE telomeric -3991 10486 10370 7 661 579 313 1 1 chrU 9971575 9971788 -77249 + MICROPIA_I LTR Gypsy 3662 3850 -626 7 661 4368 7 77 0 chrU 9972613 9973631 -75406 + DMRT1B LINE R1 473 1568 -3615 7 661 3400 190 45 25 chrU 9973731 9974749 -74288 - SAR_DM Satellite Satellite -372 1038 1 7 661 1934 9 0 0 chrU 9974849 9975080 -73957 - Copia_I LTR Copia -4362 231 1 7 661 2297 0 0 0 chrU 9975080 9975356 -73681 - Copia_LTR LTR Copia 0 276 1 7 661 2080 176 10 14 chrU 9975355 9975850 -73187 - SAR_DM Satellite Satellite -484 988 496 7 661 1022 84 6 6 chrU 9975700 9975867 -73170 + ARS406_DM Unknown Unknown 1 167 -186 7 661 3324 110 59 117 chrU 9975967 9976880 -72157 + BATUMI_I LTR Pao 30 889 -7074 7 661 48 72 0 0 chrU 9976880 9976977 -72060 + AT_rich Low_complexity Low_complexity 1 97 0 7 661 4353 0 0 10 chrU 9977105 9977609 -71428 + HOBO DNA hAT 2518 3016 0 7 661 254 174 0 80 chrU 9977772 9977847 -71190 - ROO_I LTR Pao -7536 720 652 7 661 662 264 83 30 chrU 9978559 9978922 -70115 - HETA LINE telomeric -1 6080 5699 7 661 1239 121 100 25 chrU 9978931 9979210 -69827 - TAHRE LINE telomeric -2 10461 10162 7 661 414 103 0 143 chrU 9980182 9980273 -68764 + MDG1_I LTR Gypsy 1 78 -6518 7 661 1187 65 0 12 chrU 9980432 9980603 -68434 + (TTATA)n Simple_repeat Simple_repeat 4 172 0 7 661 1870 43 8 45 chrU 9980719 9980985 -68052 - BLOOD_LTR LTR Gypsy -143 256 1 7 661 2985 24 183 2 chrU 9980990 9981448 -67589 - BLOOD_I LTR Gypsy -11 6602 6062 7 661 1021 133 15 5 chrU 9981558 9981755 -67282 - NTS_DM Other Other -35 205 7 7 661 262 125 21 0 chrU 9981841 9981889 -67148 - NTS_DM Other Other -191 49 1 7 661 1029 142 29 21 chrU 9981889 9982127 -66910 - NTS_DM Other Other 0 240 1 7 661 285 104 21 0 chrU 9982218 9982266 -66771 - NTS_DM Other Other -191 49 1 7 661 1022 145 30 22 chrU 9982266 9982498 -66539 - NTS_DM Other Other 0 240 7 7 661 8419 16 7 0 chrU 9982663 9983678 -65359 + G_DM LINE Jockey 2914 3935 -411 7 661 3497 198 14 23 chrU 9983778 9984788 -64249 + SAR_DM Satellite Satellite 1 1001 -208 7 661 377 130 10 42 chrU 9984932 9985028 -64009 - ACCORD2_I LTR Gypsy -5246 1966 1874 7 661 7026 20 10 0 chrU 9985028 9985907 -63130 + PROTOP_A DNA P 1 888 -217 7 661 2587 86 20 19 chrU 9986007 9987011 -62026 - DMSAT6 Satellite Satellite -102 1005 1 7 661 2954 155 98 63 chrU 9987121 9987961 -61076 - Gypsy12_LTR LTR Gypsy -174 2162 1294 7 661 524 247 0 12 chrU 9987963 9988135 -60902 - Gypsy12_LTR LTR Gypsy -1576 760 591 7 661 3386 5 2 5 chrU 9988235 9988666 -60371 + DOC6_DM LINE Jockey 3793 4222 0 7 661 3789 19 0 4 chrU 9988675 9989142 -59895 - PROTOP_A DNA P -640 465 1 7 661 348 263 34 8 chrU 9989142 9989249 -59788 + Gypsy12A_LTR LTR Gypsy 235 344 -1936 7 661 298 305 7 7 chrU 9989454 9989596 -59441 + (CTG)n Simple_repeat Simple_repeat 2 143 0 7 661 2056 205 17 43 chrU 9990589 9991119 -57918 - Gypsy12_LTR LTR Gypsy -1808 528 13 7 661 2362 88 0 14 chrU 9991132 9991477 -57560 - Gypsy12_I LTR Gypsy 0 5546 5207 7 661 1536 31 2 0 chrU 9991577 9992589 -56448 + (CTTAT)n Simple_repeat Simple_repeat 1 1014 0 7 661 1599 7 0 0 chrU 9992690 9992998 -56039 + (TTATA)n Simple_repeat Simple_repeat 1 308 0 7 661 2179 22 0 25 chrU 9992998 9993283 -55754 - BATUMI_I LTR Pao -680 7283 7006 7 661 3460 2 0 9 chrU 9993283 9993703 -55334 - BATUMI_I LTR Pao -25 7938 7523 7 661 3712 2 0 2 chrU 9993803 9994235 -54802 + R1_DM LINE R1 4926 5356 0 7 661 807 38 19 0 chrU 9994233 9994339 -54698 + LSU-rRNA_Dme rRNA rRNA 2640 2747 -1153 7 661 4084 12 0 0 chrU 9994331 9994816 -54221 + R1_DM LINE R1 3193 3677 -1679 7 661 22 56 0 0 chrU 9994933 9994969 -54068 + AT_rich Low_complexity Low_complexity 1 36 0 7 661 337 109 15 45 chrU 9994969 9995036 -54001 - TART LINE telomeric -6131 8346 8282 7 661 934 61 0 15 chrU 9995034 9995168 -53869 - HETA LINE telomeric -4584 1497 1366 7 661 2854 110 375 12 chrU 9995167 9995924 -53113 - HETA LINE telomeric -106 5975 4944 7 661 2676 244 23 68 chrU 9996028 9997040 -51997 - Gypsy12_LTR LTR Gypsy -1258 1078 113 7 661 753 268 23 13 chrU 9997140 9997439 -51598 - XDMR_DM Unknown Unknown -53 307 6 7 661 3614 193 20 21 chrU 9997173 9998151 -50886 + SAR_DM Satellite Satellite 57 1033 -439 7 661 470 77 0 0 chrU 9998253 9998318 -50719 - Gypsy12_I LTR Gypsy -825 4721 4657 7 661 1068 29 107 0 chrU 9998316 9998456 -50581 - PROTOP_B DNA P -998 155 1 7 661 2377 7 42 0 chrU 9998829 9999115 -49922 + Invader3_LTR LTR Gypsy 1 298 0 7 661 1287 7 0 0 chrU 9999115 9999264 -49773 + Invader3_I LTR Gypsy 1 149 -4739 7 661 3426 14 0 58 chrU 9999364 9999827 -49210 - LSU-rRNA_Dme rRNA rRNA -3464 436 1 7 661 34 24 0 0 chrU 10000115 10000156 -48881 + AT_rich Low_complexity Low_complexity 1 41 0 7 661 7636 1 21 40 chrU 10000476 10001488 -47549 - ROVER-I_DM LTR Gypsy -228 6356 5365 7 661 785 318 30 24 chrU 10002206 10002577 -46460 + Copia_I LTR Copia 1716 2088 -2505 7 661 699 117 17 0 chrU 10002699 10002819 -46218 - ARS406_DM Unknown Unknown -231 122 1 7 661 3863 184 28 28 chrU 10002729 10003704 -45333 + SAR_DM Satellite Satellite 198 1172 -300 7 661 34 24 0 0 chrU 10004272 10004313 -44724 + AT_rich Low_complexity Low_complexity 1 41 0 7 661 229 37 0 0 chrU 10004341 10004368 -44669 - NTS_DM Other Other -212 28 2 7 661 479 312 56 25 chrU 10004499 10004821 -44216 + G6_DM LINE Jockey 243 574 -1468 7 661 5289 103 37 71 chrU 10004921 10005913 -43124 - PROTOP_B DNA P -121 1032 74 7 661 1455 39 0 0 chrU 10007142 10007322 -41715 + MDG1_I LTR Gypsy 1388 1567 -5029 7 661 6344 38 33 5 chrU 10007339 10008152 -40885 + MDG1_I LTR Gypsy 1923 2758 -3838 7 661 6710 109 43 9 chrU 10008252 10009262 -39775 + Gypsy12_I LTR Gypsy 2490 3533 -2013 7 661 2781 81 91 0 chrU 10009442 10009979 -39058 - PROTOP DNA P -1279 3201 2616 7 661 4914 48 73 16 chrU 10010472 10011406 -37631 - PROTOP DNA P -252 853 1 7 661 2159 189 224 30 chrU 10011605 10012381 -36656 + HETA LINE telomeric 4984 5910 -171 7 661 34 24 0 0 chrU 10012391 10012432 -36605 + AT_rich Low_complexity Low_complexity 1 41 0 7 661 4330 0 0 0 chrU 10012692 10013164 -35873 - HOBO DNA hAT -2544 472 1 7 661 2496 13 3 0 chrU 10013801 10014111 -34926 - Invader2_I LTR Gypsy -4281 311 1 7 661 2402 4 0 0 chrU 10014111 10014377 -34660 - Invader2_LTR LTR Gypsy 0 266 1 7 661 757 352 19 14 chrU 10014388 10014803 -34234 - Copia2_I LTR Copia -1053 3109 2693 7 661 8228 26 43 1 chrU 10014910 10015918 -33119 - R1_DM LINE R1 -1344 4012 2963 7 661 4922 0 0 0 chrU 10016018 10016568 -32469 - FW_DM LINE Jockey -4142 550 1 7 661 1274 280 46 5 chrU 10016629 10017017 -32020 - MICROPIA_I LTR Gypsy -1828 2648 2245 7 661 448 49 0 0 chrU 10017126 10017187 -31850 + TC1-2_DM DNA Tc1 1584 1644 0 7 661 4062 189 16 30 chrU 10018234 10019227 -29810 + SAR_DM Satellite Satellite 1 979 -225 7 661 560 323 26 26 chrU 10019342 10019647 -29390 + Gypsy4_I LTR Gypsy 3169 3473 -2815 7 661 262 338 20 85 chrU 10020040 10020286 -28751 - ACCORD2_I LTR Gypsy -6457 755 526 7 661 8688 12 30 1 chrU 10020448 10021454 -27583 - Invader1_I LTR Gypsy -1055 2131 1097 7 661 1599 22 0 3 chrU 10021557 10021918 -27119 + (AATAG)n Simple_repeat Simple_repeat 1 359 0 7 661 1500 22 0 0 chrU 10021941 10022121 -26916 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 7 661 2001 32 17 48 chrU 10022121 10022413 -26624 + BATUMI_I LTR Pao 7002 7284 -679 7 661 1020 70 7 14 chrU 10022413 10022558 -26479 + BATUMI_I LTR Pao 1 144 -7819 7 661 1482 0 0 11 chrU 10022660 10022834 -26203 + BATUMI_I LTR Pao 7792 7963 0 7 661 1890 48 65 25 chrU 10022834 10023106 -25931 + BATUMI_I LTR Pao 7002 7284 -679 7 661 2933 197 6 0 chrU 10023117 10023666 -25371 - HMSBEAGLE_I LTR Gypsy -2954 3575 3024 7 661 4633 161 22 33 chrU 10023768 10024771 -24266 + HETA LINE telomeric 2803 3707 -2374 7 661 4065 190 14 29 chrU 10024871 10025876 -23161 + SAR_DM Satellite Satellite 1 989 -216 7 661 2091 238 88 34 chrU 10025987 10026634 -22403 + ROVER-I_DM LTR Gypsy 1599 2280 -4304 7 661 2074 56 12 20 chrU 10026637 10026981 -22056 + ROO_LTR LTR Pao 1 386 -42 7 661 3877 7 2 0 chrU 10027084 10027527 -21510 + IDEFIX_LTR LTR Gypsy 151 594 0 7 661 271 100 0 0 chrU 10027608 10027648 -21389 - BARI1 DNA Tc1 -1708 42 3 7 661 3916 15 38 0 chrU 10027616 10028086 -20951 + IDEFIX_LTR LTR Gypsy 1 488 -106 7 661 4968 10 41 0 chrU 10028186 10029191 -19846 + QUASIMODO_I LTR Gypsy 1364 2409 -3651 7 661 34 24 0 0 chrU 10029710 10029751 -19286 + AT_rich Low_complexity Low_complexity 1 41 0 7 661 223 50 24 48 chrU 10029758 10029800 -19237 + (TTA)n Simple_repeat Simple_repeat 3 43 0 7 661 4369 2 4 4 chrU 10029800 10030296 -18741 + LSU-rRNA_Dme rRNA rRNA 882 1377 -2523 7 661 4155 12 12 4 chrU 10030396 10030890 -18147 + DOC2_DM LINE Jockey 1814 2311 -2482 7 661 4629 8 0 0 chrU 10030870 10031400 -17637 + DOC2_DM LINE Jockey 2515 3044 -1749 7 661 4802 57 86 1 chrU 10031730 10032498 -16539 + PROTOP DNA P 1 753 -3727 7 661 3989 194 10 16 chrU 10032604 10033608 -15429 + SAR_DM Satellite Satellite 1 998 -203 7 661 1620 15 0 0 chrU 10033708 10033970 -15067 + (CACAA)n Simple_repeat Simple_repeat 1 262 0 7 661 6352 8 27 0 chrU 10033970 10034712 -14325 - DMRT1B LINE R1 -140 5043 4282 7 661 1857 71 82 7 chrU 10034813 10035083 -13954 - MDG1_LTR LTR Gypsy -59 383 94 7 661 300 111 0 0 chrU 10035085 10035139 -13898 + (TTA)n Simple_repeat Simple_repeat 3 56 0 7 661 726 33 0 0 chrU 10035149 10035240 -13797 - ROO_I LTR Pao -1775 6481 6391 7 661 4445 44 9 0 chrU 10035251 10035816 -13221 - ROO_I LTR Pao -2088 6168 5599 7 661 2865 34 0 11 chrU 10035946 10036304 -12733 + G2_DM LINE Jockey 1411 1764 -1338 7 661 300 269 87 24 chrU 10036424 10036630 -12407 + G6_DM LINE Jockey 243 461 -1581 7 661 977 218 48 27 chrU 10036628 10036920 -12117 + G_DM LINE Jockey 556 853 -3493 7 661 1158 122 0 0 chrU 10037123 10037529 -11508 + (TA)n Simple_repeat Simple_repeat 1 406 0 7 661 282 113 104 0 chrU 10037527 10037642 -11395 + (TACTG)n Simple_repeat Simple_repeat 4 130 0 7 661 1062 161 0 22 chrU 10037658 10038022 -11015 + (TA)n Simple_repeat Simple_repeat 1 355 0 7 661 23 0 0 0 chrU 10038542 10038565 -10472 + AT_rich Low_complexity Low_complexity 1 23 0 7 661 3112 53 53 2 chrU 10038669 10039125 -9912 - PROTOP_A DNA P -74 1031 570 7 661 2634 32 3 0 chrU 10039226 10039539 -9498 + DIVER2_LTR LTR Pao 72 385 0 7 661 4174 21 62 6 chrU 10040328 10040848 -8189 - MICROPIA_I LTR Gypsy -160 4316 3768 7 661 4206 12 2 10 chrU 10040842 10041330 -7707 - MICROPIA_I LTR Gypsy -894 3582 3099 7 661 8408 10 0 15 chrU 10041430 10042431 -6606 + QUASIMODO_I LTR Gypsy 1168 2153 -3907 7 661 3308 27 48 2 chrU 10042531 10042945 -6092 - FW_DM LINE Jockey -1140 3552 3120 7 661 875 10 0 0 chrU 10043632 10043730 -5307 - ROVER-I_DM LTR Gypsy -6486 98 1 7 661 3159 14 0 3 chrU 10043730 10044098 -4939 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 661 4535 4 4 0 chrU 10044098 10044633 -4404 + QUASIMODO_I LTR Gypsy 4250 4786 -1274 7 661 1085 117 0 22 chrU 10044754 10044937 -4100 + (TA)n Simple_repeat Simple_repeat 1 179 0 7 661 696 185 0 0 chrU 10044918 10045075 -3962 + (CATA)n Simple_repeat Simple_repeat 2 158 0 7 661 975 156 0 0 chrU 10045076 10045255 -3782 + (TA)n Simple_repeat Simple_repeat 1 179 0 7 661 967 155 0 18 chrU 10045256 10045540 -3497 + (CATA)n Simple_repeat Simple_repeat 1 278 0 7 661 1059 139 0 0 chrU 10045542 10045722 -3315 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 661 433 347 43 43 chrU 10046264 10046808 -2229 - Gypsy6_I LTR Gypsy -5228 1784 900 7 661 7709 23 10 48 chrU 10046935 10047936 -1101 + LSU-rRNA_Dme rRNA rRNA 1144 2106 -1794 7 661 4393 0 0 0 chrU 10048036 10048524 -513 + NOMAD_LTR LTR Gypsy 31 518 0 7 661 2052 9 0 0 chrU 10048524 10048753 -284 - ACCORD_LTR LTR Gypsy -123 435 207 7 661 2577 3 0 0 chrU 10048752 10049037 0 - DMRT1A LINE R1 0 5183 4899 7 585 1620 0 0 3 chrXHet 0 660 -203452 + (TAGA)n Simple_repeat Simple_repeat 1 657 0 1 585 211 259 12 24 chrXHet 1985 2104 -202008 + A-rich Low_complexity Low_complexity 1 117 0 1 585 787 66 241 11 chrXHet 2860 3009 -201103 - DNAREP1_DM LINE Penelope 0 594 435 1 585 1383 78 220 0 chrXHet 3012 3320 -200792 - DNAREP1_DM LINE Penelope -217 377 2 1 585 244 103 0 0 chrXHet 3737 3776 -200336 - DNAREP1_DM LINE Penelope -555 39 1 1 585 48 60 0 0 chrXHet 6431 6514 -197598 + AT_rich Low_complexity Low_complexity 1 83 0 1 585 29 47 0 0 chrXHet 6561 6604 -197508 + AT_rich Low_complexity Low_complexity 1 43 0 1 585 26 30 0 0 chrXHet 7625 7658 -196454 + AT_rich Low_complexity Low_complexity 1 33 0 1 585 2270 83 144 0 chrXHet 7907 8426 -195686 + DNAREP1_DM LINE Penelope 1 594 0 1 585 617 189 73 68 chrXHet 10466 10671 -193441 + DNAREP1_DM LINE Penelope 368 573 -21 1 585 269 237 0 0 chrXHet 10671 10730 -193382 + DNAREP1_DM LINE Penelope 1 59 -535 1 585 324 181 26 65 chrXHet 10790 10867 -193245 + DNAREP1_DM LINE Penelope 407 480 -114 1 585 244 108 88 0 chrXHet 12199 12301 -191811 + (TATAA)n Simple_repeat Simple_repeat 5 115 0 1 585 30 0 0 0 chrXHet 13118 13148 -190964 + AT_rich Low_complexity Low_complexity 1 30 0 1 585 24 53 0 0 chrXHet 13263 13301 -190811 + AT_rich Low_complexity Low_complexity 1 38 0 1 585 23 68 0 0 chrXHet 13530 13574 -190538 + AT_rich Low_complexity Low_complexity 1 44 0 1 585 5142 0 0 2 chrXHet 15253 15837 -188275 - POGO DNA Pogo 0 2121 1539 1 585 6832 4 0 3 chrXHet 15836 16599 -187513 - POGO DNA Pogo -1360 761 1 1 585 182 91 30 0 chrXHet 18190 18223 -185889 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 585 1507 42 5 0 chrXHet 18331 18524 -185588 + TC1_DM DNA Tc1 1 194 -1472 1 585 10044 33 3 1 chrXHet 18518 19703 -184409 + TC1_DM DNA Tc1 479 1666 0 1 585 22 35 0 0 chrXHet 19787 19816 -184296 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 6115 63 58 16 chrXHet 20896 21771 -182341 - Mariner2_DM DNA Tc1 0 912 1 1 585 21 0 0 0 chrXHet 21831 21852 -182260 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 3123 120 77 18 chrXHet 22080 22639 -181473 + DNAREP1_DM LINE Penelope 3 594 0 1 585 26 30 0 0 chrXHet 23286 23319 -180793 + AT_rich Low_complexity Low_complexity 1 33 0 1 585 1745 160 74 54 chrXHet 23333 23769 -180343 + DNAREP1_DM LINE Penelope 42 593 -1 1 585 225 53 105 0 chrXHet 23980 24018 -180094 - DMRP1 Unknown Unknown -10 336 295 1 585 245 29 0 29 chrXHet 24090 24125 -179987 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 585 32 0 0 0 chrXHet 24424 24456 -179656 + AT_rich Low_complexity Low_complexity 1 32 0 1 585 744 142 16 8 chrXHet 24584 24712 -179400 - DMRP1 Unknown Unknown -216 130 2 1 585 256 189 13 127 chrXHet 25800 25879 -178233 + PENELOPE LINE Penelope 3961 4030 -131 1 585 547 83 71 0 chrXHet 26873 26957 -177155 - DNAREP1_DM LINE Penelope -198 396 307 1 585 419 37 0 18 chrXHet 26953 27008 -177104 + DNAREP1_DM LINE Penelope 541 594 0 1 585 370 350 7 50 chrXHet 27432 27715 -176397 - DIVER2_I LTR Pao 0 4147 3877 1 585 913 340 33 22 chrXHet 27784 28326 -175786 - DIVER2_I LTR Pao -707 3440 2893 1 585 284 273 0 0 chrXHet 29604 29670 -174442 - DIVER2_I LTR Pao -1818 2329 2264 1 585 488 364 53 14 chrXHet 29812 30300 -173812 - DIVER2_I LTR Pao -2047 2100 1594 1 585 40 0 0 0 chrXHet 31077 31117 -172995 + AT_rich Low_complexity Low_complexity 1 40 0 1 585 35 41 0 0 chrXHet 32166 32215 -171897 + AT_rich Low_complexity Low_complexity 1 49 0 1 585 22 0 0 0 chrXHet 32248 32270 -171842 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 2356 106 8 3 chrXHet 32394 32755 -171357 + DNAREP1_DM LINE Penelope 1 363 -231 1 585 2341 134 127 19 chrXHet 32792 33272 -170840 - DNAREP1_DM LINE Penelope 0 594 63 1 585 30 0 0 0 chrXHet 33443 33473 -170639 + AT_rich Low_complexity Low_complexity 1 30 0 1 585 512 310 69 50 chrXHet 33738 34393 -169719 + I_DM LINE I 2994 3660 -2571 1 585 35 41 0 0 chrXHet 34879 34928 -169184 + AT_rich Low_complexity Low_complexity 1 49 0 1 585 22 0 0 0 chrXHet 34961 34983 -169129 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 2023 0 0 0 chrXHet 35015 35239 -168873 + DIVER_LTR LTR Pao 1 224 0 1 585 51683 1 0 0 chrXHet 35260 40903 -163209 + DIVER_I LTR Pao 1 5643 0 1 585 2023 0 0 0 chrXHet 40903 41127 -162985 + DIVER_LTR LTR Pao 1 224 0 1 585 2356 106 8 3 chrXHet 41295 41656 -162456 + DNAREP1_DM LINE Penelope 1 363 -231 1 585 2341 134 127 19 chrXHet 41693 42173 -161939 - DNAREP1_DM LINE Penelope 0 594 63 1 585 30 0 0 0 chrXHet 42344 42374 -161738 + AT_rich Low_complexity Low_complexity 1 30 0 1 585 524 309 69 50 chrXHet 42639 43294 -160818 + I_DM LINE I 2994 3660 -2571 1 585 268 286 89 41 chrXHet 43322 43468 -160644 + I_DM LINE I 4557 4709 -1522 1 585 984 100 141 0 chrXHet 44188 44358 -159754 - DNAREP1_DM LINE Penelope -96 498 305 1 585 21 0 0 0 chrXHet 44894 44915 -159197 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 783 164 279 4 chrXHet 45199 45432 -158680 + DNAREP1_DM LINE Penelope 2 298 -296 1 585 1380 95 253 28 chrXHet 45651 46136 -157976 - DNAREP1_DM LINE Penelope 0 594 1 1 585 397 209 126 9 chrXHet 46213 46324 -157788 - DNAREP1_DM LINE Penelope -17 577 454 1 585 247 167 0 0 chrXHet 46335 46377 -157735 - DNAREP1_DM LINE Penelope -267 327 286 1 585 29 78 0 0 chrXHet 46642 46706 -157406 + AT_rich Low_complexity Low_complexity 1 64 0 1 585 217 234 0 0 chrXHet 47028 47075 -157037 + (CTG)n Simple_repeat Simple_repeat 3 49 0 1 585 34 42 0 0 chrXHet 48361 48409 -155703 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 27 29 0 0 chrXHet 50107 50141 -153971 + AT_rich Low_complexity Low_complexity 1 34 0 1 585 27 49 0 0 chrXHet 51545 51586 -152526 + AT_rich Low_complexity Low_complexity 1 41 0 1 585 1972 120 120 89 chrXHet 52990 53448 -150664 - DNAREP1_DM LINE Penelope -36 558 87 1 585 1204 99 153 5 chrXHet 54137 54359 -149753 - DNAREP1_DM LINE Penelope -2 592 338 1 585 1103 296 31 22 chrXHet 54962 55547 -148565 + TC1-2_DM DNA Tc1 791 1380 -264 1 585 3144 104 31 18 chrXHet 55828 56336 -147776 - DMCR1A LINE CR1 -458 4012 3498 1 585 23 0 0 0 chrXHet 56649 56672 -147440 + AT_rich Low_complexity Low_complexity 1 23 0 1 585 26 50 0 0 chrXHet 56936 56976 -147136 + AT_rich Low_complexity Low_complexity 1 40 0 1 585 437 87 12 12 chrXHet 57407 57489 -146623 - DNAREP1_DM LINE Penelope -305 289 208 1 585 22 35 0 0 chrXHet 58417 58446 -145666 + AT_rich Low_complexity Low_complexity 1 29 0 1 585 23 0 0 0 chrXHet 59540 59563 -144549 + AT_rich Low_complexity Low_complexity 1 23 0 1 585 25 51 0 0 chrXHet 62430 62469 -141643 + AT_rich Low_complexity Low_complexity 1 39 0 1 585 28 29 0 0 chrXHet 64994 65029 -139083 + AT_rich Low_complexity Low_complexity 1 35 0 1 585 247 170 0 0 chrXHet 65171 65218 -138894 + DNAREP1_DM LINE Penelope 547 593 -1 1 585 27 49 0 0 chrXHet 65285 65326 -138786 + AT_rich Low_complexity Low_complexity 1 41 0 1 585 361 230 16 93 chrXHet 66679 66858 -137254 + DNAREP1_DM LINE Penelope 91 255 -339 1 585 2590 118 66 88 chrXHet 66858 67446 -136666 + DNAREP1_DM LINE Penelope 1 575 -19 1 585 582 139 75 176 chrXHet 69459 69686 -134426 + DNAREP1_DM LINE Penelope 20 223 -371 1 585 1251 72 118 0 chrXHet 69724 69919 -134193 - DNAREP1_DM LINE Penelope -16 578 361 1 585 333 65 161 0 chrXHet 69918 69980 -134132 - DNAREP1_DM LINE Penelope -431 163 92 1 585 33 0 0 0 chrXHet 70988 71021 -133091 + AT_rich Low_complexity Low_complexity 1 33 0 1 585 1017 148 296 28 chrXHet 72498 72827 -131285 + DNAREP1_DM LINE Penelope 1 417 -177 1 585 407 106 0 0 chrXHet 72837 72903 -131209 + DNAREP1_DM LINE Penelope 519 584 -10 1 585 429 267 0 37 chrXHet 72973 73109 -131003 - DNAREP1_DM LINE Penelope -89 505 375 1 585 2359 106 162 8 chrXHet 73484 73998 -130114 + DNAREP1_DM LINE Penelope 2 594 0 1 585 364 216 35 41 chrXHet 74040 74185 -129927 + DNAREP1_DM LINE Penelope 183 326 -268 1 585 420 114 0 0 chrXHet 74210 74280 -129832 + Transib-N1_DM DNA Transib 1 70 -444 1 585 1279 115 60 64 chrXHet 74781 75079 -129033 + Transib-N1_DM DNA Transib 129 425 -89 1 585 25 0 0 0 chrXHet 78881 78906 -125206 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 393 41 0 0 chrXHet 81522 81571 -122541 + DNAREP1_DM LINE Penelope 1 49 -545 1 585 2377 104 161 10 chrXHet 82004 82519 -121593 + DNAREP1_DM LINE Penelope 2 594 0 1 585 364 216 35 41 chrXHet 82561 82706 -121406 + DNAREP1_DM LINE Penelope 183 326 -268 1 585 420 114 0 0 chrXHet 82731 82801 -121311 + Transib-N1_DM DNA Transib 1 70 -444 1 585 985 94 94 0 chrXHet 83487 83646 -120466 - DNAREP1_DM LINE Penelope -3 591 418 1 585 248 241 0 46 chrXHet 83681 83768 -120344 + (CATATA)n Simple_repeat Simple_repeat 1 83 0 1 585 442 96 0 40 chrXHet 83887 83963 -120149 + G5A_DM LINE Jockey 2761 2833 -8 1 585 591 187 75 0 chrXHet 84290 84424 -119688 + DNAREP1_DM LINE Penelope 439 582 -12 1 585 202 224 0 49 chrXHet 85355 85477 -118635 + (CAG)n Simple_repeat Simple_repeat 3 118 0 1 585 30 0 0 0 chrXHet 86387 86417 -117695 + AT_rich Low_complexity Low_complexity 1 30 0 1 585 309 180 23 23 chrXHet 86480 86611 -117501 + (TA)n Simple_repeat Simple_repeat 1 131 0 1 585 327 295 0 0 chrXHet 87211 87316 -116796 - TC1_DM DNA Tc1 -346 1320 1216 1 585 314 59 98 0 chrXHet 87349 87400 -116712 - DNAREP1_DM LINE Penelope -39 555 500 1 585 768 83 271 5 chrXHet 87400 87603 -116509 - DNAREP1_DM LINE Penelope -298 296 40 1 585 597 71 82 0 chrXHet 87874 87972 -116140 + Transib-N1_DM DNA Transib 1 106 -408 1 585 4148 60 7 0 chrXHet 87984 88532 -115580 - BS3_DM LINE Jockey -265 1525 974 1 585 12156 132 88 7 chrXHet 88567 90900 -113212 - BS2 LINE Jockey -2195 2526 4 1 585 510 43 14 0 chrXHet 90914 90984 -113128 + Transib-N1_DM DNA Transib 444 514 0 1 585 180 0 0 0 chrXHet 91063 91083 -113029 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1 585 34 42 0 0 chrXHet 91405 91453 -112659 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 723 111 275 0 chrXHet 92010 92181 -111931 + DNAREP1_DM LINE Penelope 202 419 -175 1 585 1459 135 39 36 chrXHet 92210 92313 -111799 - Jockey2 LINE Jockey -8 3420 3319 1 585 1122 29 0 0 chrXHet 92313 92451 -111661 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 585 1459 135 39 36 chrXHet 92451 92678 -111434 - Jockey2 LINE Jockey -110 3318 3089 1 585 1488 18 0 0 chrXHet 92699 92916 -111196 + (TAA)n Simple_repeat Simple_repeat 1 217 0 1 585 1665 5 0 0 chrXHet 92916 93113 -110999 + Copia2_LTR_DM LTR Copia 2 198 0 1 585 10552 7 5 0 chrXHet 93113 94352 -109760 + Copia2_I LTR Copia 1 1245 -2917 1 585 415 113 0 0 chrXHet 94356 94418 -109694 - BS3_DM LINE Jockey -755 1035 974 1 585 6773 132 88 6 chrXHet 94453 96785 -107327 - BS2 LINE Jockey -2195 2526 4 1 585 510 43 14 0 chrXHet 96799 96869 -107243 + Transib-N1_DM DNA Transib 444 514 0 1 585 24 32 0 0 chrXHet 96939 96970 -107142 + AT_rich Low_complexity Low_complexity 1 31 0 1 585 34 42 0 0 chrXHet 97290 97338 -106774 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 723 111 275 0 chrXHet 97895 98066 -106046 + DNAREP1_DM LINE Penelope 202 419 -175 1 585 1459 135 39 36 chrXHet 98095 98198 -105914 - Jockey2 LINE Jockey -8 3420 3319 1 585 1176 28 0 0 chrXHet 98198 98342 -105770 + (TAA)n Simple_repeat Simple_repeat 3 146 0 1 585 1459 135 39 36 chrXHet 98342 98569 -105543 - Jockey2 LINE Jockey -110 3318 3089 1 585 1521 14 0 0 chrXHet 98590 98804 -105308 + (TAA)n Simple_repeat Simple_repeat 1 214 0 1 585 1665 5 0 0 chrXHet 98804 99001 -105111 + Copia2_LTR_DM LTR Copia 2 198 0 1 585 10538 7 5 0 chrXHet 99001 100240 -103872 + Copia2_I LTR Copia 1 1245 -2917 1 585 415 113 0 0 chrXHet 100244 100306 -103806 - BS3_DM LINE Jockey -755 1035 974 1 585 6646 133 89 7 chrXHet 100341 102674 -101438 - BS2 LINE Jockey -2195 2526 4 1 585 510 43 14 0 chrXHet 102688 102758 -101354 + Transib-N1_DM DNA Transib 444 514 0 1 585 180 0 0 0 chrXHet 102837 102857 -101255 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1 585 34 42 0 0 chrXHet 103179 103227 -100885 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 723 111 275 0 chrXHet 103784 103955 -100157 + DNAREP1_DM LINE Penelope 202 419 -175 1 585 1459 135 39 36 chrXHet 103984 104087 -100025 - Jockey2 LINE Jockey -8 3420 3319 1 585 1122 29 0 0 chrXHet 104087 104225 -99887 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 585 1459 135 39 36 chrXHet 104225 104452 -99660 - Jockey2 LINE Jockey -110 3318 3089 1 585 1488 18 0 0 chrXHet 104473 104690 -99422 + (TAA)n Simple_repeat Simple_repeat 1 217 0 1 585 1665 5 0 0 chrXHet 104690 104887 -99225 + Copia2_LTR_DM LTR Copia 2 198 0 1 585 10552 7 5 0 chrXHet 104887 106126 -97986 + Copia2_I LTR Copia 1 1245 -2917 1 585 415 113 0 0 chrXHet 106130 106192 -97920 - BS3_DM LINE Jockey -755 1035 974 1 585 6773 132 88 6 chrXHet 106227 108559 -95553 - BS2 LINE Jockey -2195 2526 4 1 585 510 43 14 0 chrXHet 108573 108643 -95469 + Transib-N1_DM DNA Transib 444 514 0 1 585 180 0 0 0 chrXHet 108722 108742 -95370 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1 585 34 42 0 0 chrXHet 109064 109112 -95000 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 723 111 275 0 chrXHet 109669 109840 -94272 + DNAREP1_DM LINE Penelope 202 419 -175 1 585 1459 135 39 36 chrXHet 109869 109972 -94140 - Jockey2 LINE Jockey -8 3420 3319 1 585 1122 29 0 0 chrXHet 109972 110110 -94002 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 585 1459 135 39 36 chrXHet 110110 110337 -93775 - Jockey2 LINE Jockey -110 3318 3089 1 585 1488 18 0 0 chrXHet 110358 110575 -93537 + (TAA)n Simple_repeat Simple_repeat 1 217 0 1 585 1665 5 0 0 chrXHet 110575 110772 -93340 + Copia2_LTR_DM LTR Copia 2 198 0 1 585 10552 7 5 0 chrXHet 110772 112011 -92101 + Copia2_I LTR Copia 1 1245 -2917 1 585 415 113 0 0 chrXHet 112015 112077 -92035 - BS3_DM LINE Jockey -755 1035 974 1 585 6773 132 88 6 chrXHet 112112 114444 -89668 - BS2 LINE Jockey -2195 2526 4 1 585 510 43 14 0 chrXHet 114458 114528 -89584 + Transib-N1_DM DNA Transib 444 514 0 1 585 180 0 0 0 chrXHet 114607 114627 -89485 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1 585 34 42 0 0 chrXHet 114949 114997 -89115 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 723 111 275 0 chrXHet 115554 115725 -88387 + DNAREP1_DM LINE Penelope 202 419 -175 1 585 1459 135 39 36 chrXHet 115754 115857 -88255 - Jockey2 LINE Jockey -8 3420 3319 1 585 1122 29 0 0 chrXHet 115857 115995 -88117 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 585 1459 135 39 36 chrXHet 115995 116222 -87890 - Jockey2 LINE Jockey -110 3318 3089 1 585 1488 18 0 0 chrXHet 116243 116460 -87652 + (TAA)n Simple_repeat Simple_repeat 1 217 0 1 585 1665 5 0 0 chrXHet 116460 116657 -87455 + Copia2_LTR_DM LTR Copia 2 198 0 1 585 10552 7 5 0 chrXHet 116657 117896 -86216 + Copia2_I LTR Copia 1 1245 -2917 1 585 415 113 0 0 chrXHet 117900 117962 -86150 - BS3_DM LINE Jockey -755 1035 974 1 585 6773 132 88 6 chrXHet 117997 120329 -83783 - BS2 LINE Jockey -2195 2526 4 1 585 510 43 14 0 chrXHet 120343 120413 -83699 + Transib-N1_DM DNA Transib 444 514 0 1 585 180 0 0 0 chrXHet 120492 120512 -83600 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1 585 34 42 0 0 chrXHet 120834 120882 -83230 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 723 111 275 0 chrXHet 121439 121610 -82502 + DNAREP1_DM LINE Penelope 202 419 -175 1 585 1459 135 39 36 chrXHet 121639 121742 -82370 - Jockey2 LINE Jockey -8 3420 3319 1 585 1122 29 0 0 chrXHet 121742 121880 -82232 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 585 1459 135 39 36 chrXHet 121880 122107 -82005 - Jockey2 LINE Jockey -110 3318 3089 1 585 1488 18 0 0 chrXHet 122128 122348 -81764 + (TAA)n Simple_repeat Simple_repeat 1 220 0 1 585 1665 5 0 0 chrXHet 122348 122545 -81567 + Copia2_LTR_DM LTR Copia 2 198 0 1 585 10552 7 5 0 chrXHet 122545 123784 -80328 + Copia2_I LTR Copia 1 1245 -2917 1 585 415 113 0 0 chrXHet 123788 123850 -80262 - BS3_DM LINE Jockey -755 1035 974 1 585 6773 132 88 6 chrXHet 123885 126217 -77895 - BS2 LINE Jockey -2195 2526 4 1 585 510 43 14 0 chrXHet 126231 126301 -77811 + Transib-N1_DM DNA Transib 444 514 0 1 585 24 32 0 0 chrXHet 126371 126402 -77710 + AT_rich Low_complexity Low_complexity 1 31 0 1 585 34 42 0 0 chrXHet 126722 126770 -77342 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 721 112 282 0 chrXHet 127327 127497 -76615 + DNAREP1_DM LINE Penelope 202 419 -175 1 585 1462 132 42 36 chrXHet 127526 127629 -76483 - Jockey2 LINE Jockey -7 3421 3319 1 585 987 32 0 0 chrXHet 127629 127752 -76360 + (TAA)n Simple_repeat Simple_repeat 3 125 0 1 585 1462 132 42 36 chrXHet 127752 127979 -76133 - Jockey2 LINE Jockey -110 3318 3089 1 585 1488 18 0 0 chrXHet 128000 128220 -75892 + (TAA)n Simple_repeat Simple_repeat 1 220 0 1 585 1665 5 0 0 chrXHet 128220 128417 -75695 + Copia2_LTR_DM LTR Copia 2 198 0 1 73 34596 10 14 0 chrXHet 128417 132521 -71591 + Copia2_I LTR Copia 1 4162 0 1 586 1672 5 0 0 chrXHet 132521 132719 -71393 + Copia2_LTR_DM LTR Copia 1 198 0 1 586 801 18 70 23 chrXHet 132719 132890 -71222 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1 586 2942 92 25 0 chrXHet 132893 133340 -70772 - Jockey2 LINE Jockey -177 3251 2794 1 586 273 276 38 38 chrXHet 134492 134624 -69488 - IVK_DM LINE I -326 5076 4945 1 586 6639 63 63 1 chrXHet 134783 135729 -68383 + DOC4_DM LINE Jockey 1 1005 -1786 1 586 1130 48 0 13 chrXHet 135750 135899 -68213 + DOC4_DM LINE Jockey 1107 1253 -1538 1 586 576 291 13 18 chrXHet 135921 136192 -67920 + DOC LINE Jockey 2312 2604 -2136 1 586 24 0 0 0 chrXHet 136247 136271 -67841 + AT_rich Low_complexity Low_complexity 1 24 0 1 586 333 284 16 31 chrXHet 136513 136737 -67375 + FW_DM LINE Jockey 3024 3093 -1599 1 586 1242 238 102 30 chrXHet 136714 137177 -66935 + DOC LINE Jockey 3221 3788 -1068 1 586 968 229 54 44 chrXHet 137214 137621 -66491 + Gypsy_LTR LTR Gypsy 26 436 -46 1 586 4381 98 93 11 chrXHet 137784 139023 -65089 - BS LINE Jockey 0 5126 3786 1 586 10700 70 27 1 chrXHet 139025 140709 -63403 - BS LINE Jockey -1556 3570 1754 1 586 632 195 6 17 chrXHet 140720 140897 -63215 - G_DM LINE Jockey -80 4266 4092 1 586 3455 222 22 17 chrXHet 140895 141725 -62387 + Gypsy_I LTR Gypsy 434 1267 -5240 1 586 837 134 0 0 chrXHet 141733 141867 -62245 + Gypsy_I LTR Gypsy 3800 3933 -2574 1 586 2455 151 104 0 chrXHet 142247 142697 -61415 + Gypsy_I LTR Gypsy 3936 4432 -2075 1 586 1343 140 37 34 chrXHet 142698 142994 -61118 - G_DM LINE Jockey -9 4337 4041 1 586 3225 129 68 2 chrXHet 142995 143569 -60543 - G_DM LINE Jockey -649 3697 3086 1 586 3577 144 84 16 chrXHet 143560 144251 -59861 - G_DM LINE Jockey -1614 2732 1995 1 586 3829 214 39 10 chrXHet 144274 145234 -58878 - G6_DM LINE Jockey -606 1436 450 1 586 2003 105 23 3 chrXHet 145230 145535 -58577 + Gypsy_I LTR Gypsy 4424 4734 -1773 1 586 2302 149 23 19 chrXHet 145581 146060 -58052 + G_DM LINE Jockey 3857 4337 -9 1 586 2441 153 104 0 chrXHet 146061 146511 -57601 - Gypsy_I LTR Gypsy -2075 4432 3936 1 586 837 134 0 0 chrXHet 146944 147078 -57034 - Gypsy_I LTR Gypsy -2574 3933 3800 1 586 3448 222 22 17 chrXHet 147086 147916 -56196 - Gypsy_I LTR Gypsy -5240 1267 434 1 586 632 195 6 17 chrXHet 147914 148091 -56021 + G_DM LINE Jockey 4092 4266 -80 1 586 10660 72 27 1 chrXHet 148102 149786 -54326 + BS LINE Jockey 1754 3570 -1556 1 586 3910 94 131 12 chrXHet 149788 150985 -53127 + BS LINE Jockey 3786 5125 -1 1 586 903 227 172 2 chrXHet 150986 151296 -52816 + Gypsy_I LTR Gypsy 6195 6504 -3 1 586 1076 234 50 35 chrXHet 151296 151698 -52414 + Gypsy_LTR LTR Gypsy 30 437 -45 1 586 478 148 0 0 chrXHet 151725 151806 -52306 + Invader4_LTR LTR Gypsy 1 81 -265 1 586 274 57 0 0 chrXHet 151806 151841 -52271 - G5A_DM LINE Jockey -992 1849 1815 1 586 199 73 23 47 chrXHet 151909 151952 -52160 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 1 586 1113 71 0 13 chrXHet 154011 154167 -49945 + DMCR1A LINE CR1 1 154 -4316 1 586 255 128 0 41 chrXHet 154294 154343 -49769 - Transib-N1_DM DNA Transib -345 169 123 1 586 382 123 136 0 chrXHet 154698 154779 -49333 - Transib-N1_DM DNA Transib -399 115 24 1 586 481 90 0 0 chrXHet 154775 154841 -49271 + DNAREP1_DM LINE Penelope 517 582 -12 1 586 353 23 45 0 chrXHet 154841 154885 -49227 - DNAREP1_DM LINE Penelope 0 594 549 1 586 230 200 48 48 chrXHet 154885 154902 -49210 + P_DG DNA P 2755 2815 -73 1 586 362 39 19 0 chrXHet 155159 155211 -48901 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 586 35 24 0 0 chrXHet 155299 155341 -48771 + AT_rich Low_complexity Low_complexity 1 42 0 1 586 25099 45 32 2 chrXHet 156073 161365 -42747 - Baggins1 LINE LOA 0 5453 1 1 586 44 0 0 0 chrXHet 161797 161841 -42271 + AT_rich Low_complexity Low_complexity 1 44 0 1 586 2456 98 150 37 chrXHet 162584 163118 -40994 - DNAREP1_DM LINE Penelope 0 594 1 1 586 2712 60 6 0 chrXHet 163296 163646 -40466 + Invader5_LTR LTR Gypsy 1 352 0 1 586 1414 49 0 0 chrXHet 163646 163810 -40302 + Invader5_I LTR Gypsy 1 164 -3170 1 586 7215 53 45 3 chrXHet 163828 164768 -39344 + TRANSIB2 DNA Transib 434 1412 -1432 1 586 8854 76 14 23 chrXHet 164756 165954 -38158 - G5A_DM LINE Jockey -1320 1521 335 1 586 2058 246 124 21 chrXHet 165955 166566 -37546 - G5_DM LINE Jockey -3011 1845 1172 1 586 565 84 0 24 chrXHet 166573 166658 -37454 + TRANSIB2 DNA Transib 2762 2844 0 1 586 846 287 46 18 chrXHet 166658 167115 -36997 + G_DM LINE Jockey 2056 2586 -1760 1 586 1081 191 99 9 chrXHet 167114 167326 -36786 + G_DM LINE Jockey 3097 3327 -1019 1 586 5283 0 0 0 chrXHet 167316 167880 -36232 - Helitron1_DM RC Helitron 0 564 1 1 586 21 36 0 0 chrXHet 167939 167967 -36145 + AT_rich Low_complexity Low_complexity 1 28 0 1 586 39 68 0 0 chrXHet 168013 168087 -36025 + AT_rich Low_complexity Low_complexity 1 74 0 1 586 670 90 38 57 chrXHet 168356 168462 -35650 - PROTOP DNA P -459 4021 3918 1 586 413 139 70 0 chrXHet 168462 168548 -35564 - PROTOP DNA P -3406 1074 983 1 586 7769 38 86 16 chrXHet 168558 170012 -34100 + IVK_DM LINE I 1 1556 -3846 1 586 9426 40 51 0 chrXHet 170003 171164 -32948 + IVK_DM LINE I 1734 2953 -2449 1 586 15514 51 66 0 chrXHet 171164 173138 -30974 + IVK_DM LINE I 3299 5402 0 1 586 1122 71 185 0 chrXHet 173138 173322 -30790 - PROTOP DNA P -4033 447 230 1 586 3761 44 20 26 chrXHet 173325 173816 -30296 - DOC3_DM LINE Jockey 0 4740 4253 1 586 11822 52 14 11 chrXHet 173826 175308 -28804 - DOC3_DM LINE Jockey -1584 3156 1671 1 586 1133 58 204 0 chrXHet 175313 175573 -28539 + R2_DM LINE R2 3285 3597 -10 1 586 485 36 0 0 chrXHet 175569 175624 -28488 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 586 2110 162 74 7 chrXHet 175624 176058 -28054 + R1_DM LINE R1 1 463 -4893 1 586 6240 62 6 0 chrXHet 176055 176832 -27280 + R1_DM LINE R1 2119 2900 -2456 1 586 15942 60 42 1 chrXHet 176833 178973 -25139 - DMRT1B LINE R1 -8 5175 2930 1 586 435 19 0 0 chrXHet 178974 179026 -25086 + R1_DM LINE R1 2893 2944 -2412 1 586 378 0 0 0 chrXHet 179027 179068 -25044 + R1_DM LINE R1 3222 3262 -2094 1 586 4127 53 47 0 chrXHet 179066 179576 -24536 + R2_DM LINE R2 2680 3213 -394 1 586 2369 41 17 10 chrXHet 179579 179874 -24238 + LSU-rRNA_Dme rRNA rRNA 2285 2581 -1319 1 586 2692 47 125 2 chrXHet 179873 180361 -23751 + R2_DM LINE R2 3 550 -3057 1 586 408 20 20 0 chrXHet 180363 180407 -23705 + R2_DM LINE R2 661 705 -2902 1 586 315 201 22 216 chrXHet 180407 180453 -23659 + Gypsy11_LTR LTR Gypsy 1 127 -325 1 586 306 275 96 37 chrXHet 180453 180589 -23523 + T412LTR LTR LTR 42 185 -296 1 586 315 201 22 216 chrXHet 180589 180629 -23483 + Gypsy11_LTR LTR Gypsy 128 245 -207 1 586 678 96 7 161 chrXHet 180661 180810 -23302 + Gypsy3_LTR LTR Gypsy 1 126 -272 1 586 228 162 0 0 chrXHet 181026 181063 -23049 + STALKER4_I LTR Gypsy 9 45 -6485 1 586 700 270 51 113 chrXHet 181080 181647 -22465 + MDG1_I LTR Gypsy 113 644 -5952 1 586 390 117 62 0 chrXHet 181643 181771 -22341 + MDG1_I LTR Gypsy 756 891 -5705 1 586 261 209 14 29 chrXHet 181791 181860 -22252 + G_DM LINE Jockey 1179 1246 -3100 1 586 359 279 27 38 chrXHet 182092 182278 -21834 + G_DM LINE Jockey 1937 2120 -2226 1 586 1851 302 69 51 chrXHet 182389 183881 -20231 + G_DM LINE Jockey 1408 4073 -273 1 586 22 56 0 0 chrXHet 184312 184348 -19764 + AT_rich Low_complexity Low_complexity 1 36 0 1 586 23 50 0 48 chrXHet 184564 184627 -19485 + AT_rich Low_complexity Low_complexity 1 60 0 1 586 5840 9 1 35 chrXHet 184639 185343 -18769 + LSU-rRNA_Dme rRNA rRNA 1 680 -3220 1 586 468 81 287 0 chrXHet 185343 185430 -18682 + LSU-rRNA_Dme rRNA rRNA 1370 1481 -2419 1 586 5836 19 34 0 chrXHet 185428 186105 -18007 + R2_DM LINE R2 191 890 -2717 1 586 8134 20 8 1 chrXHet 186102 187038 -17074 - FW_DM LINE Jockey -1417 3275 2334 1 586 18690 22 18 5 chrXHet 187052 189224 -14888 - FW_DM LINE Jockey -2490 2202 3 1 586 26 93 0 0 chrXHet 189699 189774 -14338 + AT_rich Low_complexity Low_complexity 1 75 0 1 586 32 53 0 38 chrXHet 189868 189947 -14165 + AT_rich Low_complexity Low_complexity 1 76 0 1 586 17629 9 12 1 chrXHet 190009 190188 -13924 + SSU-rRNA_Dme rRNA rRNA 26 204 -1791 1 586 243 0 0 0 chrXHet 190188 190215 -13897 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1 586 17629 9 12 1 chrXHet 190215 191984 -12128 + SSU-rRNA_Dme rRNA rRNA 205 1994 -1 1 586 23 68 0 0 chrXHet 192664 192708 -11404 + AT_rich Low_complexity Low_complexity 1 44 0 1 586 22 56 0 0 chrXHet 192943 192979 -11133 + AT_rich Low_complexity Low_complexity 1 36 0 1 586 28 79 0 0 chrXHet 193194 193257 -10855 + AT_rich Low_complexity Low_complexity 1 63 0 1 586 22942 11 6 28 chrXHet 193270 195959 -8153 + LSU-rRNA_Dme rRNA rRNA 2 2632 -1268 1 586 26802 7 1 0 chrXHet 195959 198910 -5202 + R1_DM LINE R1 1 2953 -2403 1 586 33675 3 0 0 chrXHet 198909 202517 -1595 + R2_DM LINE R2 1 3607 0 1 586 462 55 0 0 chrXHet 202516 202571 -1541 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 586 3807 55 55 4 chrXHet 202571 203064 -1048 + R1_DM LINE R1 1 518 -4838 1 586 9395 11 1 1 chrXHet 203063 204112 0 + R1_DM LINE R1 777 1825 -3531 1 585 14395 159 13 24 chrX 6 2416 -22420411 + HETA LINE telomeric 1633 4017 -2064 1 585 198 0 0 0 chrX 2416 2438 -22420389 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 585 14395 152 37 30 chrX 2438 4230 -22418597 + HETA LINE telomeric 4018 4464 -1617 1 585 7940 142 58 33 chrX 4238 6129 -22416698 + TART LINE telomeric 7224 10663 -3814 1 585 14774 159 27 22 chrX 6140 10394 -22412433 + HETA LINE telomeric 1450 6081 0 1 585 313 0 0 0 chrX 10395 10433 -22412394 + TAHRE LINE telomeric 10418 10455 -8 1 585 6427 104 37 116 chrX 10424 10797 -22412030 + TAHRE LINE telomeric 7350 7723 -2740 1 585 198 0 0 0 chrX 10797 10819 -22412008 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1 585 10973 65 17 33 chrX 10819 12794 -22410033 + TAHRE LINE telomeric 7724 10455 -8 1 585 307 0 0 0 chrX 12835 12872 -22409955 + HETA LINE telomeric 6045 6081 0 1 585 19905 169 22 52 chrX 12851 17063 -22405764 + HETA LINE telomeric 1 4017 -2064 1 585 198 0 0 0 chrX 17063 17085 -22405742 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 585 19905 152 35 31 chrX 17085 18879 -22403948 + HETA LINE telomeric 4018 4463 -1618 1 585 498 71 0 12 chrX 19111 19196 -22403631 + TAHRE LINE telomeric 10380 10463 0 1 585 263 49 24 0 chrX 19407 19448 -22403379 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 585 228 109 91 0 chrX 19448 19503 -22403324 - HETRP_DM Satellite Satellite -799 1073 1014 1 585 639 141 40 13 chrX 19825 19976 -22402851 - HETRP_DM Satellite Satellite -13 1859 1705 1 585 541 76 0 12 chrX 20233 20313 -22402514 - DNAREP1_DM LINE Penelope -1 593 515 1 585 736 93 163 0 chrX 20584 20713 -22402114 + DNAREP1_DM LINE Penelope 408 557 -37 1 585 205 182 0 0 chrX 24613 24657 -22398170 + A-rich Low_complexity Low_complexity 1 44 0 1 585 23 0 0 0 chrX 24741 24764 -22398063 + AT_rich Low_complexity Low_complexity 1 23 0 1 585 24 32 0 0 chrX 25000 25031 -22397796 + AT_rich Low_complexity Low_complexity 1 31 0 1 585 1226 145 133 57 chrX 26625 27062 -22395765 - DNAREP1_DM LINE Penelope 0 594 1 1 585 23 33 0 0 chrX 27457 27487 -22395340 + AT_rich Low_complexity Low_complexity 1 30 0 1 585 228 217 0 32 chrX 28646 28708 -22394119 + DNAREP1_DM LINE Penelope 532 591 -3 1 585 1952 131 65 10 chrX 31453 31840 -22390987 - DNAREP1_DM LINE Penelope -98 496 89 1 585 1939 130 6 3 chrX 31844 32175 -22390652 - DNAREP1_DM LINE Penelope -262 332 1 1 585 25 0 0 0 chrX 33183 33208 -22389619 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 233 277 59 10 chrX 33437 33539 -22389288 + DNAREP1_DM LINE Penelope 463 569 -25 1 585 23 0 0 0 chrX 35379 35402 -22387425 + AT_rich Low_complexity Low_complexity 1 23 0 1 585 24 85 0 0 chrX 36730 36789 -22386038 + AT_rich Low_complexity Low_complexity 1 59 0 1 585 337 177 54 0 chrX 36799 36946 -22385881 + (TA)n Simple_repeat Simple_repeat 1 155 0 1 585 30 77 0 0 chrX 37037 37102 -22385725 + AT_rich Low_complexity Low_complexity 1 65 0 1 585 26 30 0 0 chrX 37168 37201 -22385626 + AT_rich Low_complexity Low_complexity 1 33 0 1 585 382 77 0 0 chrX 40317 40369 -22382458 + DNAREP1_DM LINE Penelope 508 559 -35 1 585 228 100 0 0 chrX 44596 44636 -22378191 + (A)n Simple_repeat Simple_repeat 1 40 0 1 585 238 304 27 0 chrX 46342 46357 -22376470 + P_DG DNA P 2742 2759 -129 1 585 1988 105 131 5 chrX 46357 46732 -22376095 - DNAREP1_DM LINE Penelope -2 592 171 1 585 1532 153 111 6 chrX 47621 47962 -22374865 + DNAREP1_DM LINE Penelope 218 594 0 1 585 518 215 157 43 chrX 49000 49185 -22373642 + DNAREP1_DM LINE Penelope 389 594 0 1 585 23 0 0 0 chrX 50357 50380 -22372447 + AT_rich Low_complexity Low_complexity 1 23 0 1 585 450 183 11 0 chrX 51129 51222 -22371605 - DNAREP1_DM LINE Penelope 0 594 501 1 585 2178 84 103 8 chrX 51811 52318 -22370509 - DNAREP1_DM LINE Penelope 0 594 1 1 585 243 158 181 12 chrX 53237 53320 -22369507 - DNAREP1_DM LINE Penelope -490 104 8 1 585 32 26 0 0 chrX 53699 53738 -22369089 + AT_rich Low_complexity Low_complexity 1 39 0 1 585 621 150 285 17 chrX 54318 54606 -22368221 + DNAREP1_DM LINE Penelope 120 485 -109 1 585 289 246 8 50 chrX 54661 54781 -22368046 + DNAREP1_DM LINE Penelope 61 175 -419 1 585 855 124 157 0 chrX 54849 55031 -22367796 - DNAREP1_DM LINE Penelope 0 594 431 1 585 348 173 26 75 chrX 55026 55171 -22367656 - DNAREP1_DM LINE Penelope -295 299 50 1 585 576 164 117 0 chrX 55183 55311 -22367516 + DNAREP1_DM LINE Penelope 452 594 0 1 585 25 0 0 0 chrX 56409 56434 -22366393 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 4137 25 0 2 chrX 56709 57195 -22365632 - DMCR1A LINE CR1 0 4470 3986 1 585 3919 0 0 0 chrX 57195 57623 -22365204 + ROO_LTR LTR Pao 1 428 0 1 585 18780 2 2 0 chrX 57623 59754 -22363073 + ROO_I LTR Pao 1 2135 -6121 1 585 37653 0 0 0 chrX 59739 63963 -22358864 + ROO_I LTR Pao 4032 8256 0 1 585 3902 2 0 0 chrX 63963 64391 -22358436 + ROO_LTR LTR Pao 1 428 0 1 585 709 12 0 0 chrX 64391 64471 -22358356 - DMCR1A LINE CR1 -481 3989 3910 1 585 760 77 620 19 chrX 64474 64684 -22358143 - DNAREP1_DM LINE Penelope 0 594 259 1 585 274 0 0 0 chrX 64685 64715 -22358112 - DNAREP1_DM LINE Penelope 0 594 565 1 585 2749 125 56 11 chrX 64715 65217 -22357610 - DNAREP1_DM LINE Penelope 0 594 117 1 585 752 133 44 7 chrX 65198 65334 -22357493 - DNAREP1_DM LINE Penelope -422 172 32 1 585 21 36 0 0 chrX 66058 66086 -22356741 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 26 50 0 0 chrX 66996 67036 -22355791 + AT_rich Low_complexity Low_complexity 1 40 0 1 585 225 204 0 0 chrX 69241 69285 -22353542 - DNAREP1_DM LINE Penelope -195 399 356 1 585 21 71 0 0 chrX 70804 70846 -22351981 + AT_rich Low_complexity Low_complexity 1 42 0 1 585 300 229 0 0 chrX 70971 71032 -22351795 + DNAREP1_DM LINE Penelope 431 491 -103 1 585 21 0 0 0 chrX 71141 71162 -22351665 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 189 121 0 0 chrX 75440 75473 -22347354 + (ATG)n Simple_repeat Simple_repeat 3 35 0 1 585 614 31 41 0 chrX 76098 76195 -22346632 + (TA)n Simple_repeat Simple_repeat 1 101 0 1 585 1276 106 112 77 chrX 76282 76569 -22346258 - DNAREP1_DM LINE Penelope -297 297 1 1 585 267 140 60 0 chrX 76610 76660 -22346167 - DNAREP1_DM LINE Penelope -414 180 128 1 585 910 181 64 47 chrX 77974 78449 -22344378 + DNAREP1_DM LINE Penelope 1 594 0 1 585 22 0 0 0 chrX 79590 79612 -22343215 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 1981 144 49 39 chrX 79778 80184 -22342643 + DNAREP1_DM LINE Penelope 185 594 0 1 585 398 212 80 10 chrX 80683 80783 -22342044 + DNAREP1_DM LINE Penelope 373 479 -115 1 585 235 139 0 0 chrX 80799 80835 -22341992 + DNAREP1_DM LINE Penelope 555 590 -4 1 585 304 205 258 16 chrX 81647 81771 -22341056 - DNAREP1_DM LINE Penelope -8 586 433 1 585 281 230 155 21 chrX 81941 82083 -22340744 + PROTOP DNA P 4320 4480 0 1 585 35 54 0 0 chrX 82209 82265 -22340562 + AT_rich Low_complexity Low_complexity 1 56 0 1 585 1331 125 39 28 chrX 82907 83162 -22339665 + DNAREP1_DM LINE Penelope 1 258 -336 1 585 638 141 23 8 chrX 83651 83780 -22339047 + DNAREP1_DM LINE Penelope 128 258 -336 1 585 314 187 234 36 chrX 85615 85726 -22337101 - DNAREP1_DM LINE Penelope -2 592 460 1 585 388 103 35 0 chrX 87156 87214 -22335613 + DNAREP1_DM LINE Penelope 14 73 -521 1 585 252 173 0 0 chrX 87228 87280 -22335547 + DNAREP1_DM LINE Penelope 264 315 -279 1 585 210 163 23 0 chrX 88960 89003 -22333824 + (CATA)n Simple_repeat Simple_repeat 1 44 0 1 585 681 246 131 14 chrX 89228 89596 -22333231 - DNAREP1_DM LINE Penelope -136 458 118 1 585 2026 128 240 21 chrX 90450 90921 -22331906 - DNAREP1_DM LINE Penelope -20 574 1 1 585 278 229 0 32 chrX 91147 91210 -22331617 - DNAREP1_DM LINE Penelope -533 61 1 1 585 2429 112 75 2 chrX 92825 93241 -22329586 - DNAREP1_DM LINE Penelope 0 594 1 1 585 207 0 0 0 chrX 95862 95885 -22326942 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 585 44 63 0 0 chrX 95927 96006 -22326821 + AT_rich Low_complexity Low_complexity 1 79 0 1 585 29 47 0 0 chrX 96470 96513 -22326314 + AT_rich Low_complexity Low_complexity 1 43 0 1 585 190 55 0 53 chrX 96849 96887 -22325940 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 1 585 208 293 17 0 chrX 97335 97393 -22325434 + GA-rich Low_complexity Low_complexity 5 63 0 1 585 1886 285 57 43 chrX 98281 99981 -22322846 + SAR_DM Satellite Satellite 1 1722 -218 1 585 1977 276 48 53 chrX 100007 103860 -22318967 + SAR_DM Satellite Satellite 1 3834 -256 1 585 1990 281 40 48 chrX 103871 111517 -22311310 + SAR_DM Satellite Satellite 1 7582 -242 1 73 1856 282 41 50 chrX 129522 132651 -22290176 + SAR_DM Satellite Satellite 1 3101 -217 1 586 1866 287 36 44 chrX 132671 135157 -22287670 + SAR_DM Satellite Satellite 1 2466 -216 1 586 681 290 23 26 chrX 134945 135292 -22287535 - XDMR_DM Unknown Unknown -9 351 6 1 586 1960 278 47 45 chrX 135217 137535 -22285292 + SAR_DM Satellite Satellite 1 2321 -216 1 586 315 282 12 35 chrX 137422 137591 -22285236 - XDMR_DM Unknown Unknown -9 351 187 1 586 266 301 0 34 chrX 137724 137841 -22284986 + SAR_DM Satellite Satellite 979 1091 -381 1 586 21 36 0 0 chrX 138094 138122 -22284705 + AT_rich Low_complexity Low_complexity 1 28 0 1 586 21 0 0 0 chrX 138262 138283 -22284544 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 21 0 0 0 chrX 141683 141704 -22281123 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 25 0 0 0 chrX 142339 142364 -22280463 + AT_rich Low_complexity Low_complexity 1 25 0 1 586 24 0 0 0 chrX 149611 149635 -22273192 + AT_rich Low_complexity Low_complexity 1 24 0 1 586 38 22 0 0 chrX 154111 154156 -22268671 + AT_rich Low_complexity Low_complexity 1 45 0 1 586 204 125 0 0 chrX 154627 154659 -22268168 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 1 586 25 51 0 0 chrX 155535 155574 -22267253 + AT_rich Low_complexity Low_complexity 1 39 0 1 586 22 35 0 0 chrX 157046 157075 -22265752 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 245 338 7 13 chrX 159284 159437 -22263390 + SAR_DM Satellite Satellite 925 1076 -396 1 586 201 154 0 0 chrX 160305 160344 -22262483 + (CCG)n Simple_repeat Simple_repeat 1 39 0 1 586 21 36 0 0 chrX 162832 162860 -22259967 + AT_rich Low_complexity Low_complexity 1 28 0 1 586 25 0 0 0 chrX 163623 163648 -22259179 + AT_rich Low_complexity Low_complexity 1 25 0 1 586 1007 126 52 8 chrX 168909 169366 -22253461 - DNAREP1_DM LINE Penelope -147 447 1 1 586 226 254 0 16 chrX 171259 171323 -22251504 - DNAREP1_DM LINE Penelope -103 491 429 1 586 29 0 0 0 chrX 171416 171445 -22251382 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 279 114 0 0 chrX 171471 171515 -22251312 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 586 31 44 0 0 chrX 173808 173853 -22248974 + AT_rich Low_complexity Low_complexity 1 45 0 1 586 384 156 252 39 chrX 174613 174740 -22248087 + M4DM DNA Transib 1 154 -1281 1 586 1801 103 87 4 chrX 176112 176557 -22246270 + DNAREP1_DM LINE Penelope 1 520 -74 1 586 25 0 0 0 chrX 176800 176825 -22246002 + AT_rich Low_complexity Low_complexity 1 25 0 1 586 21 71 0 0 chrX 177244 177286 -22245541 + AT_rich Low_complexity Low_complexity 1 42 0 1 586 267 197 26 13 chrX 177290 177367 -22245460 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 586 471 198 94 0 chrX 179188 179294 -22243533 + DNAREP1_DM LINE Penelope 1 116 -478 1 586 428 263 115 76 chrX 179295 179583 -22243244 + DNAREP1_DM LINE Penelope 286 584 -10 1 586 495 106 106 0 chrX 182192 182277 -22240550 - DNAREP1_DM LINE Penelope -1 593 500 1 586 877 115 165 8 chrX 182297 182533 -22240294 - DNAREP1_DM LINE Penelope -321 273 1 1 586 21 0 0 0 chrX 184752 184773 -22238054 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 22 0 0 0 chrX 184798 184820 -22238007 + AT_rich Low_complexity Low_complexity 1 22 0 1 586 1404 130 85 7 chrX 184853 185124 -22237703 + DNAREP1_DM LINE Penelope 1 292 -302 1 586 24 53 0 0 chrX 185340 185378 -22237449 + AT_rich Low_complexity Low_complexity 1 38 0 1 586 2796 48 0 32 chrX 186658 187027 -22235800 - G3_DM LINE Jockey -20 4585 4229 1 586 21 36 0 0 chrX 187239 187267 -22235560 + AT_rich Low_complexity Low_complexity 1 28 0 1 586 60507 2 1 15 chrX 189894 197508 -22225319 - DM412 LTR Gypsy 0 6897 1 1 586 511 168 0 70 chrX 197701 197816 -22225011 + DNAREP1_DM LINE Penelope 370 476 -118 1 586 234 211 268 27 chrX 199157 199269 -22223558 + DNAREP1_DM LINE Penelope 402 540 -54 1 586 443 179 187 36 chrX 199682 199821 -22223006 - DNAREP1_DM LINE Penelope -9 585 426 1 586 1955 131 77 26 chrX 200534 200966 -22221861 + DNAREP1_DM LINE Penelope 3 594 0 1 586 24 0 0 0 chrX 202087 202111 -22220716 + AT_rich Low_complexity Low_complexity 1 24 0 1 586 32 43 0 0 chrX 203682 203728 -22219099 + AT_rich Low_complexity Low_complexity 1 46 0 1 586 210 109 0 80 chrX 206814 206864 -22215963 + (ACTG)n Simple_repeat Simple_repeat 2 47 0 1 586 45 69 0 0 chrX 207933 208020 -22214807 + AT_rich Low_complexity Low_complexity 1 87 0 1 586 734 70 0 174 chrX 208406 208544 -22214283 + DNAREP1_DM LINE Penelope 364 477 -117 1 586 33 94 0 0 chrX 210424 210520 -22212307 + AT_rich Low_complexity Low_complexity 1 96 0 1 586 23 78 0 0 chrX 210622 210673 -22212154 + AT_rich Low_complexity Low_complexity 1 51 0 1 586 38 22 0 0 chrX 210767 210812 -22212015 + AT_rich Low_complexity Low_complexity 1 45 0 1 586 24 32 0 0 chrX 212275 212306 -22210521 + AT_rich Low_complexity Low_complexity 1 31 0 1 586 2269 11 7 11 chrX 212558 212834 -22209993 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 586 40718 1 1 0 chrX 212834 217311 -22205516 + BLASTOPIA_I LTR Gypsy 1 4481 0 1 586 2269 11 7 11 chrX 217311 217587 -22205240 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 586 263 152 22 0 chrX 218177 218223 -22204604 - DNAREP1_DM LINE Penelope -535 59 13 1 586 28 91 0 0 chrX 219414 219491 -22203336 + AT_rich Low_complexity Low_complexity 1 77 0 1 586 186 167 0 0 chrX 223177 223213 -22199614 + (ACTG)n Simple_repeat Simple_repeat 3 38 0 1 586 393 167 93 10 chrX 223598 223695 -22199132 - DNAREP1_DM LINE Penelope -103 491 387 1 586 26 0 0 0 chrX 225750 225776 -22197051 + AT_rich Low_complexity Low_complexity 1 26 0 1 586 25 0 0 0 chrX 226096 226121 -22196706 + AT_rich Low_complexity Low_complexity 1 25 0 1 586 26 30 0 0 chrX 227292 227325 -22195502 + AT_rich Low_complexity Low_complexity 1 33 0 1 586 23 33 0 0 chrX 228166 228196 -22194631 + AT_rich Low_complexity Low_complexity 1 30 0 1 586 255 288 0 0 chrX 228973 229046 -22193781 - DNAREP1_DM LINE Penelope -18 576 504 1 586 25 31 0 0 chrX 229054 229086 -22193741 + AT_rich Low_complexity Low_complexity 1 32 0 1 586 245 241 0 0 chrX 229166 229224 -22193603 - DNAREP1_DM LINE Penelope -536 58 1 1 586 1386 87 124 70 chrX 231340 231599 -22191228 + DNAREP1_DM LINE Penelope 320 592 -2 1 586 195 42 0 0 chrX 231638 231662 -22191165 + (AATAG)n Simple_repeat Simple_repeat 2 25 0 1 586 201 268 0 0 chrX 232072 232128 -22190699 + A-rich Low_complexity Low_complexity 1 56 0 1 586 201 192 0 19 chrX 232249 232302 -22190525 + (TTTA)n Simple_repeat Simple_repeat 4 55 0 1 586 37 69 0 0 chrX 232327 232399 -22190428 + AT_rich Low_complexity Low_complexity 1 72 0 1 586 210 115 49 0 chrX 232557 232618 -22190209 + T-rich Low_complexity Low_complexity 1 64 0 1 586 39 0 0 0 chrX 233555 233594 -22189233 + AT_rich Low_complexity Low_complexity 1 39 0 1 586 237 295 0 0 chrX 234464 234525 -22188302 + (CATA)n Simple_repeat Simple_repeat 1 61 0 1 586 326 197 0 0 chrX 235689 235750 -22187077 + DNAREP1_DM LINE Penelope 12 72 -522 1 586 32 81 0 0 chrX 236539 236613 -22186214 + AT_rich Low_complexity Low_complexity 1 74 0 1 586 228 111 0 0 chrX 237204 237240 -22185587 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 586 24 32 0 0 chrX 237343 237374 -22185453 + AT_rich Low_complexity Low_complexity 1 31 0 1 586 27 29 0 0 chrX 238723 238757 -22184070 + AT_rich Low_complexity Low_complexity 1 34 0 1 586 206 167 0 20 chrX 238779 238828 -22183999 + (TTA)n Simple_repeat Simple_repeat 1 48 0 1 586 29 47 0 0 chrX 240027 240070 -22182757 + AT_rich Low_complexity Low_complexity 1 43 0 1 586 21 57 0 0 chrX 240143 240178 -22182649 + AT_rich Low_complexity Low_complexity 1 35 0 1 586 260 265 0 0 chrX 241505 241588 -22181239 + (CAA)n Simple_repeat Simple_repeat 3 85 0 1 586 191 36 0 35 chrX 241801 241830 -22180997 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 1 586 345 182 306 0 chrX 241932 242053 -22180774 - DNAREP1_DM LINE Penelope -53 541 384 1 586 21 57 0 0 chrX 242055 242090 -22180737 + AT_rich Low_complexity Low_complexity 1 35 0 1 586 240 206 162 0 chrX 245483 245551 -22177276 - DNAREP1_DM LINE Penelope -515 79 1 1 586 36 70 0 0 chrX 245551 245622 -22177205 + AT_rich Low_complexity Low_complexity 1 71 0 1 586 317 239 0 0 chrX 245799 245870 -22176957 + DNAREP1_DM LINE Penelope 1 71 -523 1 586 286 222 0 0 chrX 246260 246314 -22176513 + DNAREP1_DM LINE Penelope 9 62 -532 1 586 331 91 0 0 chrX 246325 246369 -22176458 + DNAREP1_DM LINE Penelope 551 594 0 1 586 253 197 16 16 chrX 246326 246388 -22176439 - P_DG DNA P -90 2798 2737 1 586 51 51 0 0 chrX 247384 247463 -22175364 + AT_rich Low_complexity Low_complexity 1 79 0 1 586 21 57 0 0 chrX 248149 248184 -22174643 + AT_rich Low_complexity Low_complexity 1 35 0 1 586 22 35 0 0 chrX 250627 250656 -22172171 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 28 29 0 0 chrX 256029 256064 -22166763 + AT_rich Low_complexity Low_complexity 1 35 0 1 586 34 24 0 0 chrX 258195 258236 -22164591 + AT_rich Low_complexity Low_complexity 1 41 0 1 586 21 0 0 0 chrX 258265 258286 -22164541 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 242 237 0 17 chrX 259708 259768 -22163059 + DNAREP1_DM LINE Penelope 1 59 -535 1 586 259 189 0 0 chrX 260153 260206 -22162621 + DNAREP1_DM LINE Penelope 517 569 -25 1 586 21 0 0 0 chrX 261032 261053 -22161774 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 22 0 0 0 chrX 261638 261660 -22161167 + AT_rich Low_complexity Low_complexity 1 22 0 1 586 21 0 0 0 chrX 261767 261788 -22161039 + AT_rich Low_complexity Low_complexity 1 21 0 1 587 31 58 0 0 chrX 263459 263511 -22159316 + AT_rich Low_complexity Low_complexity 1 52 0 1 587 257 268 0 0 chrX 264420 264491 -22158336 + ROO_I LTR Pao 668 738 -7518 1 587 282 182 0 0 chrX 265143 265198 -22157629 + DNAREP1_DM LINE Penelope 517 571 -23 1 587 21 36 0 0 chrX 266078 266106 -22156721 + AT_rich Low_complexity Low_complexity 1 28 0 1 587 309 198 115 11 chrX 266170 266257 -22156570 + DNAREP1_DM LINE Penelope 499 594 0 1 587 25 0 0 0 chrX 270830 270855 -22151972 + AT_rich Low_complexity Low_complexity 1 25 0 1 587 30 59 0 0 chrX 275098 275149 -22147678 + AT_rich Low_complexity Low_complexity 1 51 0 1 587 24 0 0 0 chrX 275248 275272 -22147555 + AT_rich Low_complexity Low_complexity 1 24 0 1 587 22 0 0 0 chrX 279085 279107 -22143720 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 23 0 0 0 chrX 279465 279488 -22143339 + AT_rich Low_complexity Low_complexity 1 23 0 1 587 22 0 0 0 chrX 285706 285728 -22137099 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 37 0 0 0 chrX 285758 285795 -22137032 + AT_rich Low_complexity Low_complexity 1 37 0 1 587 266 170 0 0 chrX 286222 286269 -22136558 + DNAREP1_DM LINE Penelope 15 61 -533 1 587 24 0 0 0 chrX 286683 286707 -22136120 + AT_rich Low_complexity Low_complexity 1 24 0 1 587 23 0 0 0 chrX 287558 287581 -22135246 + AT_rich Low_complexity Low_complexity 1 23 0 1 587 240 86 0 0 chrX 287865 287900 -22134927 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 587 26 30 0 0 chrX 295081 295114 -22127713 + AT_rich Low_complexity Low_complexity 1 33 0 1 587 333 111 19 0 chrX 295129 295183 -22127644 + DNAREP1_DM LINE Penelope 540 594 0 1 587 198 0 0 0 chrX 302099 302121 -22120706 + (T)n Simple_repeat Simple_repeat 1 22 0 1 587 24 0 0 0 chrX 304722 304746 -22118081 + AT_rich Low_complexity Low_complexity 1 24 0 1 587 35 24 0 0 chrX 305019 305061 -22117766 + AT_rich Low_complexity Low_complexity 1 42 0 1 587 180 0 0 0 chrX 305725 305745 -22117082 + (A)n Simple_repeat Simple_repeat 1 20 0 1 587 24 32 0 0 chrX 308477 308508 -22114319 + AT_rich Low_complexity Low_complexity 1 31 0 1 587 21 82 0 0 chrX 308609 308658 -22114169 + AT_rich Low_complexity Low_complexity 1 49 0 1 587 25 31 0 0 chrX 312629 312661 -22110166 + AT_rich Low_complexity Low_complexity 1 32 0 1 587 207 0 0 0 chrX 314109 314132 -22108695 + (A)n Simple_repeat Simple_repeat 1 23 0 1 587 21 71 0 0 chrX 315969 316011 -22106816 + AT_rich Low_complexity Low_complexity 1 42 0 1 587 21 0 0 0 chrX 317055 317076 -22105751 + AT_rich Low_complexity Low_complexity 1 21 0 1 587 21 36 0 0 chrX 320599 320627 -22102200 + AT_rich Low_complexity Low_complexity 1 28 0 1 587 201 154 0 0 chrX 321573 321612 -22101215 + A-rich Low_complexity Low_complexity 1 39 0 1 587 3166 0 0 0 chrX 322506 322867 -22099960 + BEL_LTR LTR Pao 1 361 0 1 587 47576 1 0 0 chrX 322867 328272 -22094555 + BEL_I LTR Pao 1 5404 0 1 587 3166 0 0 0 chrX 328272 328633 -22094194 + BEL_LTR LTR Pao 1 361 0 1 587 22 70 0 0 chrX 329615 329658 -22093169 + AT_rich Low_complexity Low_complexity 1 43 0 1 587 206 232 14 0 chrX 342766 342835 -22079992 + (ATGGTG)n Simple_repeat Simple_repeat 4 73 0 1 587 25 31 0 0 chrX 348986 349018 -22073809 + AT_rich Low_complexity Low_complexity 1 32 0 1 587 25 65 0 0 chrX 351969 352015 -22070812 + AT_rich Low_complexity Low_complexity 1 46 0 1 587 218 208 0 0 chrX 357933 357981 -22064846 + A-rich Low_complexity Low_complexity 1 48 0 1 587 210 37 0 0 chrX 365137 365164 -22057663 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1 587 22 0 0 0 chrX 370720 370742 -22052085 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 279 54 0 0 chrX 370807 370844 -22051983 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 587 25 0 0 0 chrX 371515 371540 -22051287 + AT_rich Low_complexity Low_complexity 1 25 0 1 587 23 0 0 0 chrX 376867 376890 -22045937 + AT_rich Low_complexity Low_complexity 1 23 0 1 587 242 284 14 0 chrX 388162 388236 -22034591 + (TATG)n Simple_repeat Simple_repeat 1 75 0 1 587 21 36 0 0 chrX 391961 391989 -22030838 + AT_rich Low_complexity Low_complexity 1 28 0 1 587 21 36 0 0 chrX 392079 392107 -22030720 + AT_rich Low_complexity Low_complexity 1 28 0 1 588 229 175 0 0 chrX 393912 393952 -22028875 + (CGG)n Simple_repeat Simple_repeat 3 42 0 1 588 229 51 25 25 chrX 403020 403060 -22019767 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 1 588 22 35 0 0 chrX 406531 406560 -22016267 + AT_rich Low_complexity Low_complexity 1 29 0 1 588 25 31 0 0 chrX 407135 407167 -22015660 + AT_rich Low_complexity Low_complexity 1 32 0 1 588 35 54 0 0 chrX 407233 407289 -22015538 + AT_rich Low_complexity Low_complexity 1 56 0 1 588 192 135 0 0 chrX 407928 407965 -22014862 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 588 22 35 0 0 chrX 408221 408250 -22014577 + AT_rich Low_complexity Low_complexity 1 29 0 1 588 237 98 0 0 chrX 408577 408618 -22014209 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 588 24 85 0 0 chrX 408714 408773 -22014054 + AT_rich Low_complexity Low_complexity 1 59 0 1 588 23 54 0 0 chrX 408891 408928 -22013899 + AT_rich Low_complexity Low_complexity 1 37 0 1 588 22 56 0 0 chrX 409152 409188 -22013639 + AT_rich Low_complexity Low_complexity 1 36 0 1 588 35 0 0 0 chrX 409635 409670 -22013157 + AT_rich Low_complexity Low_complexity 1 35 0 1 588 223 127 0 68 chrX 411283 411342 -22011485 + T-rich Low_complexity Low_complexity 5 59 0 1 588 355 261 22 38 chrX 412943 413126 -22009701 + (CTG)n Simple_repeat Simple_repeat 1 180 0 1 588 22 35 0 0 chrX 413502 413531 -22009296 + AT_rich Low_complexity Low_complexity 1 29 0 1 588 28 0 0 0 chrX 415332 415360 -22007467 + AT_rich Low_complexity Low_complexity 1 28 0 1 588 192 200 0 0 chrX 418332 418372 -22004455 + (TATATG)n Simple_repeat Simple_repeat 4 43 0 1 588 25 51 0 0 chrX 420063 420102 -22002725 + AT_rich Low_complexity Low_complexity 1 39 0 1 588 471 118 0 0 chrX 425926 426011 -21996816 + (CACAC)n Simple_repeat Simple_repeat 3 87 0 1 588 234 250 0 0 chrX 426434 426502 -21996325 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 588 251 169 11 57 chrX 426622 426710 -21996117 + (TTGGGG)n Simple_repeat Simple_repeat 4 87 0 1 588 186 143 0 0 chrX 429230 429265 -21993562 + (TTTCG)n Simple_repeat Simple_repeat 4 38 0 1 588 189 121 0 0 chrX 429805 429838 -21992989 + (ATG)n Simple_repeat Simple_repeat 3 35 0 1 588 228 143 0 0 chrX 430559 430601 -21992226 + (TTTCC)n Simple_repeat Simple_repeat 2 43 0 1 588 189 0 0 0 chrX 435884 435905 -21986922 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 588 207 246 0 0 chrX 436333 436390 -21986437 + (CCCCG)n Simple_repeat Simple_repeat 1 57 0 1 588 213 163 0 0 chrX 436517 436566 -21986261 + (TGGG)n Simple_repeat Simple_repeat 2 50 0 1 588 451 183 0 88 chrX 438018 438120 -21984707 + DNAREP1_DM LINE Penelope 384 476 -118 1 588 32 57 0 0 chrX 440091 440144 -21982683 + AT_rich Low_complexity Low_complexity 1 53 0 1 588 231 179 17 51 chrX 440929 440988 -21981839 - RSP Satellite Satellite -4 114 58 1 588 23 33 0 0 chrX 441359 441389 -21981438 + AT_rich Low_complexity Low_complexity 1 30 0 1 588 246 176 0 0 chrX 442539 442590 -21980237 + GA-rich Low_complexity Low_complexity 2 52 0 1 588 61760 2 1 10 chrX 445509 453014 -21969813 + DM412 LTR Gypsy 1 6897 0 1 588 205 184 0 0 chrX 455734 455772 -21967055 + (CAGGT)n Simple_repeat Simple_repeat 2 39 0 1 588 22 35 0 0 chrX 456188 456217 -21966610 + AT_rich Low_complexity Low_complexity 1 29 0 1 588 189 0 0 0 chrX 463104 463125 -21959702 + (AGGGGG)n Simple_repeat Simple_repeat 3 23 0 1 588 183 129 0 0 chrX 464604 464635 -21958192 + (CAGT)n Simple_repeat Simple_repeat 4 34 0 1 588 24 0 0 0 chrX 465406 465430 -21957397 + AT_rich Low_complexity Low_complexity 1 24 0 1 588 233 174 65 0 chrX 466628 466674 -21956153 + DNAREP1_DM LINE Penelope 546 594 0 1 588 229 63 91 45 chrX 467480 467546 -21955281 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 1 588 180 125 0 0 chrX 469951 469983 -21952844 + (TCTCTG)n Simple_repeat Simple_repeat 5 36 0 1 588 376 51 0 33 chrX 471040 471101 -21951726 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 588 310 279 18 24 chrX 472117 472282 -21950545 + A-rich Low_complexity Low_complexity 5 168 0 1 588 258 274 29 15 chrX 472319 472456 -21950371 + A-rich Low_complexity Low_complexity 3 141 0 1 588 29 0 0 0 chrX 472502 472531 -21950296 + AT_rich Low_complexity Low_complexity 1 29 0 1 588 24 0 0 0 chrX 472638 472662 -21950165 + AT_rich Low_complexity Low_complexity 1 24 0 1 588 206 62 0 30 chrX 475132 475165 -21947662 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1 588 180 0 0 0 chrX 475483 475503 -21947324 + (GATTG)n Simple_repeat Simple_repeat 3 22 0 1 588 290 226 0 16 chrX 475964 476027 -21946800 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 588 438 120 0 0 chrX 483382 483457 -21939370 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 588 285 75 0 0 chrX 484844 484884 -21937943 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 588 217 289 9 9 chrX 487961 488076 -21934751 + (CCA)n Simple_repeat Simple_repeat 1 115 0 1 588 203 333 0 0 chrX 490694 490769 -21932058 + (CGA)n Simple_repeat Simple_repeat 3 77 0 1 588 23 0 0 0 chrX 491719 491742 -21931085 + AT_rich Low_complexity Low_complexity 1 23 0 1 588 204 211 0 0 chrX 495007 495045 -21927782 + (CAGAC)n Simple_repeat Simple_repeat 1 38 0 1 588 306 0 0 0 chrX 497180 497214 -21925613 + (CGATA)n Simple_repeat Simple_repeat 1 34 0 1 588 208 218 0 35 chrX 500198 500255 -21922572 + A-rich Low_complexity Low_complexity 3 57 0 1 588 232 252 0 87 chrX 508799 508925 -21913902 - ROO_I LTR Pao -7507 749 635 1 588 235 238 0 31 chrX 508945 509010 -21913817 + (CTG)n Simple_repeat Simple_repeat 1 63 0 1 588 215 217 0 0 chrX 509264 509310 -21913517 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 588 22 0 0 0 chrX 522984 523006 -21899821 + AT_rich Low_complexity Low_complexity 1 22 0 1 589 233 300 0 32 chrX 530321 530414 -21892413 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 589 180 111 0 0 chrX 530698 530725 -21892102 + (TATG)n Simple_repeat Simple_repeat 4 30 0 1 589 267 192 0 0 chrX 534591 534664 -21888163 + (CAG)n Simple_repeat Simple_repeat 3 75 0 1 589 267 54 0 0 chrX 536867 536904 -21885923 + (GGA)n Simple_repeat Simple_repeat 1 37 0 1 589 827 151 205 29 chrX 540422 540810 -21882017 - DNAREP1_DM LINE Penelope -64 530 75 1 589 33 66 0 0 chrX 540961 541022 -21881805 + AT_rich Low_complexity Low_complexity 1 61 0 1 589 207 0 0 0 chrX 543465 543488 -21879339 + (TGG)n Simple_repeat Simple_repeat 1 23 0 1 589 291 164 0 0 chrX 543486 543547 -21879280 + (CTG)n Simple_repeat Simple_repeat 2 62 0 1 589 220 304 10 42 chrX 545609 545722 -21877105 + (TTG)n Simple_repeat Simple_repeat 1 109 0 1 589 219 234 0 15 chrX 545850 545915 -21876912 + (CTG)n Simple_repeat Simple_repeat 2 65 0 1 589 285 151 0 0 chrX 546324 546377 -21876450 + (ATGGTG)n Simple_repeat Simple_repeat 1 53 0 1 589 216 182 0 0 chrX 556585 556629 -21866198 + (CAG)n Simple_repeat Simple_repeat 3 46 0 1 589 1018 101 0 0 chrX 559408 559547 -21863280 + DNAREP1_DM LINE Penelope 1 139 -455 1 589 1392 107 102 0 chrX 559548 559763 -21863064 + DNAREP1_DM LINE Penelope 300 536 -58 1 589 33 0 0 0 chrX 563321 563354 -21859473 + AT_rich Low_complexity Low_complexity 1 33 0 1 589 24 0 0 0 chrX 563699 563723 -21859104 + AT_rich Low_complexity Low_complexity 1 24 0 1 589 29 28 0 0 chrX 564552 564588 -21858239 + AT_rich Low_complexity Low_complexity 1 36 0 1 589 631 126 0 0 chrX 567836 567931 -21854896 + DNAREP1_DM LINE Penelope 500 594 0 1 589 303 28 0 0 chrX 570158 570194 -21852633 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 589 321 26 0 0 chrX 575399 575437 -21847390 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 589 279 0 0 0 chrX 576207 576238 -21846589 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1 589 1895 127 122 17 chrX 578403 578756 -21844071 - DNAREP1_DM LINE Penelope -2 592 203 1 589 24 32 0 0 chrX 582318 582349 -21840478 + AT_rich Low_complexity Low_complexity 1 31 0 1 589 366 141 14 40 chrX 587982 588056 -21834771 - DNAREP1_DM LINE Penelope 0 594 523 1 589 289 208 0 0 chrX 588119 588172 -21834655 - DNAREP1_DM LINE Penelope -540 54 2 1 589 1137 130 57 29 chrX 588200 588494 -21834333 - DNAREP1_DM LINE Penelope -151 443 17 1 589 198 219 0 0 chrX 592170 592234 -21830593 + (TATG)n Simple_repeat Simple_repeat 1 64 0 1 589 22 0 0 0 chrX 593509 593531 -21829296 + AT_rich Low_complexity Low_complexity 1 22 0 1 589 251 208 19 0 chrX 593756 593809 -21829018 + DNAREP1_DM LINE Penelope 1 54 -540 1 589 26 0 0 0 chrX 593857 593883 -21828944 + AT_rich Low_complexity Low_complexity 1 26 0 1 589 294 219 96 0 chrX 593940 594013 -21828814 + DNAREP1_DM LINE Penelope 515 594 0 1 589 748 65 242 0 chrX 599231 599355 -21823472 - DNAREP1_DM LINE Penelope 0 594 441 1 589 1564 80 82 23 chrX 599363 599619 -21823208 - DNAREP1_DM LINE Penelope -323 271 1 1 589 23 33 0 0 chrX 599619 599649 -21823178 + AT_rich Low_complexity Low_complexity 1 30 0 1 589 207 0 0 0 chrX 603071 603094 -21819733 + (T)n Simple_repeat Simple_repeat 1 23 0 1 589 270 206 0 0 chrX 603660 603733 -21819094 + (CTA)n Simple_repeat Simple_repeat 2 74 0 1 589 21 36 0 0 chrX 603957 603985 -21818842 + AT_rich Low_complexity Low_complexity 1 28 0 1 589 3232 94 122 8 chrX 604618 605151 -21817676 - DNAREP1_DM LINE Penelope 0 594 1 1 589 303 242 0 0 chrX 605982 606048 -21816779 - DNAREP1_DM LINE Penelope 0 594 529 1 589 213 39 0 0 chrX 611340 611366 -21811461 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 589 716 84 0 0 chrX 612850 612945 -21809882 - DNAREP1_DM LINE Penelope -495 99 5 1 589 23 0 0 0 chrX 615579 615602 -21807225 + AT_rich Low_complexity Low_complexity 1 23 0 1 589 253 57 0 28 chrX 615727 615763 -21807064 - DNAREP1_DM LINE Penelope -42 552 518 1 589 1139 93 289 17 chrX 615731 616140 -21806687 - DNAREP1_DM LINE Penelope -111 483 12 1 589 233 111 44 0 chrX 618737 618782 -21804045 + (TATAA)n Simple_repeat Simple_repeat 3 49 0 1 589 297 0 0 0 chrX 619818 619851 -21802976 + (A)n Simple_repeat Simple_repeat 1 33 0 1 589 282 216 0 0 chrX 620328 620402 -21802425 + (ACTG)n Simple_repeat Simple_repeat 3 76 0 1 589 24 0 0 0 chrX 622519 622543 -21800284 + AT_rich Low_complexity Low_complexity 1 24 0 1 589 23 0 0 0 chrX 630803 630826 -21792001 + AT_rich Low_complexity Low_complexity 1 23 0 1 589 26 64 0 0 chrX 630882 630929 -21791898 + AT_rich Low_complexity Low_complexity 1 47 0 1 589 222 37 0 0 chrX 633214 633241 -21789586 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 589 21 36 0 0 chrX 636055 636083 -21786744 + AT_rich Low_complexity Low_complexity 1 28 0 1 589 22 35 0 0 chrX 640871 640900 -21781927 + AT_rich Low_complexity Low_complexity 1 29 0 1 589 198 103 0 0 chrX 642758 642787 -21780040 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 589 39 38 0 0 chrX 643615 643668 -21779159 + AT_rich Low_complexity Low_complexity 1 53 0 1 589 230 298 0 31 chrX 643925 644047 -21778780 + CT-rich Low_complexity Low_complexity 1 118 0 1 589 352 233 22 22 chrX 644361 644497 -21778330 + (TGG)n Simple_repeat Simple_repeat 1 136 0 1 589 24 0 0 0 chrX 645055 645079 -21777748 + AT_rich Low_complexity Low_complexity 1 24 0 1 589 23 0 0 0 chrX 645112 645135 -21777692 + AT_rich Low_complexity Low_complexity 1 23 0 1 589 30 27 0 0 chrX 646284 646321 -21776506 + AT_rich Low_complexity Low_complexity 1 37 0 1 589 201 176 0 0 chrX 651058 651092 -21771735 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 589 39 68 0 0 chrX 652725 652799 -21770028 + AT_rich Low_complexity Low_complexity 1 74 0 1 589 233 196 19 19 chrX 653430 653482 -21769345 - RSP Satellite Satellite -7 111 60 1 590 243 125 0 0 chrX 655735 655775 -21767052 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 590 250 348 0 0 chrX 658500 658655 -21764172 + (CAG)n Simple_repeat Simple_repeat 3 157 0 1 590 186 167 0 0 chrX 667251 667287 -21755540 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 1 590 445 96 766 0 chrX 671582 671706 -21751121 - DNAREP1_DM LINE Penelope -1 593 375 1 590 25 0 0 0 chrX 671806 671831 -21750996 + AT_rich Low_complexity Low_complexity 1 25 0 1 590 434 172 208 13 chrX 672539 672698 -21750129 - DNAREP1_DM LINE Penelope -335 259 70 1 590 242 277 0 0 chrX 674030 674095 -21748732 + CT-rich Low_complexity Low_complexity 4 68 0 1 590 198 0 0 0 chrX 683230 683252 -21739575 + (T)n Simple_repeat Simple_repeat 1 22 0 1 590 21 0 0 0 chrX 690363 690384 -21732443 + AT_rich Low_complexity Low_complexity 1 21 0 1 590 21 36 0 0 chrX 691375 691403 -21731424 + AT_rich Low_complexity Low_complexity 1 28 0 1 590 222 156 0 22 chrX 695102 695148 -21727679 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 590 24 0 0 0 chrX 697462 697486 -21725341 + AT_rich Low_complexity Low_complexity 1 24 0 1 590 35 24 0 0 chrX 697803 697845 -21724982 + AT_rich Low_complexity Low_complexity 1 42 0 1 590 224 222 0 0 chrX 698547 698601 -21724226 + (TGG)n Simple_repeat Simple_repeat 2 55 0 1 590 46 19 0 0 chrX 699616 699669 -21723158 + AT_rich Low_complexity Low_complexity 1 53 0 1 590 208 164 15 15 chrX 702041 702109 -21720718 + A-rich Low_complexity Low_complexity 2 69 0 1 590 22 35 0 0 chrX 702150 702179 -21720648 + AT_rich Low_complexity Low_complexity 1 29 0 1 590 31 26 0 0 chrX 703286 703324 -21719503 + AT_rich Low_complexity Low_complexity 1 38 0 1 590 205 191 0 0 chrX 703464 703506 -21719321 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 1 590 207 0 0 0 chrX 705769 705792 -21717035 + (TTCGG)n Simple_repeat Simple_repeat 4 26 0 1 590 3365 8 40 8 chrX 706354 706755 -21716072 + DM297_LTR LTR Gypsy 1 414 0 1 590 35165 7 0 1 chrX 706755 710761 -21712066 + DM297_I LTR Gypsy 1 4002 -2165 1 590 6613 9 0 0 chrX 710733 711527 -21711300 + DM297_I LTR Gypsy 5374 6167 0 1 590 3365 8 40 8 chrX 711527 711928 -21710899 + DM297_LTR LTR Gypsy 1 414 0 1 590 205 156 22 22 chrX 713182 713228 -21709599 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 590 3959 5 0 0 chrX 721689 722117 -21700710 + ROO_LTR LTR Pao 1 428 0 1 590 50080 1 13 0 chrX 722117 727687 -21695140 + ROO_I LTR Pao 1 5641 -2615 1 590 11784 2 9 1 chrX 727684 728995 -21693832 + ROO_I LTR Pao 6935 8256 0 1 590 3969 5 0 0 chrX 728995 729423 -21693404 + ROO_LTR LTR Pao 1 428 0 1 590 22 56 0 0 chrX 737331 737367 -21685460 + AT_rich Low_complexity Low_complexity 1 36 0 1 590 21 36 0 0 chrX 737488 737516 -21685311 + AT_rich Low_complexity Low_complexity 1 28 0 1 590 232 283 0 0 chrX 737592 737645 -21685182 - DNAREP1_DM LINE Penelope -541 53 1 1 590 249 272 16 31 chrX 740623 740752 -21682075 + T-rich Low_complexity Low_complexity 4 130 0 1 590 26 0 0 0 chrX 741392 741418 -21681409 + AT_rich Low_complexity Low_complexity 1 26 0 1 590 371 98 0 0 chrX 742879 742930 -21679897 + DNAREP1_DM LINE Penelope 4 54 -540 1 590 220 204 0 0 chrX 752102 752151 -21670676 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 590 195 129 0 0 chrX 752165 752196 -21670631 + (TTA)n Simple_repeat Simple_repeat 1 31 0 1 590 21 0 0 0 chrX 760985 761006 -21661821 + GC_rich Low_complexity Low_complexity 1 21 0 1 590 212 175 0 0 chrX 764422 764462 -21658365 + A-rich Low_complexity Low_complexity 1 40 0 1 590 273 222 0 45 chrX 766829 766895 -21655932 + DNAREP1_DM LINE Penelope 9 71 -523 1 590 247 250 0 0 chrX 771406 771454 -21651373 + (CGA)n Simple_repeat Simple_repeat 2 49 0 1 590 183 80 0 0 chrX 772454 772479 -21650348 + (CATAC)n Simple_repeat Simple_repeat 5 29 0 1 590 218 215 0 12 chrX 774008 774088 -21648739 + GA-rich Low_complexity Low_complexity 1 79 0 1 590 295 282 16 24 chrX 774471 774598 -21648229 + (CAGA)n Simple_repeat Simple_repeat 3 128 0 1 590 216 0 0 0 chrX 777280 777304 -21645523 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 590 24 32 0 0 chrX 778149 778180 -21644647 + AT_rich Low_complexity Low_complexity 1 31 0 1 590 25 0 0 0 chrX 778370 778395 -21644432 + AT_rich Low_complexity Low_complexity 1 25 0 1 590 244 226 19 0 chrX 781349 781402 -21641425 + (CATA)n Simple_repeat Simple_repeat 3 56 0 1 590 1954 241 92 24 chrX 782860 783665 -21639162 - SAR_DM Satellite Satellite -405 1067 208 1 590 810 228 99 14 chrX 783515 783808 -21639019 + XDMR Unknown Unknown 1 318 -43 1 590 288 53 175 0 chrX 783807 783864 -21638963 + XDMR Unknown Unknown 1 67 -294 1 591 206 298 0 0 chrX 788181 788265 -21634562 + (CTG)n Simple_repeat Simple_repeat 1 84 0 1 591 348 103 0 0 chrX 788715 788773 -21634054 + (CAG)n Simple_repeat Simple_repeat 3 60 0 1 591 25 31 0 0 chrX 789205 789237 -21633590 + AT_rich Low_complexity Low_complexity 1 32 0 1 591 241 259 11 34 chrX 793363 793451 -21629376 + A-rich Low_complexity Low_complexity 6 91 0 1 591 206 297 21 21 chrX 794844 794937 -21627890 + (CAA)n Simple_repeat Simple_repeat 3 95 0 1 591 12193 96 3 2 chrX 800788 802522 -21620305 + S_DM DNA Tc1 1 1736 0 1 591 34 0 0 0 chrX 808410 808444 -21614383 + AT_rich Low_complexity Low_complexity 1 34 0 1 591 21 36 0 0 chrX 808770 808798 -21614029 + AT_rich Low_complexity Low_complexity 1 28 0 1 591 198 91 0 0 chrX 811199 811232 -21611595 + (CGAAG)n Simple_repeat Simple_repeat 3 35 0 1 591 465 141 0 0 chrX 814727 814798 -21608029 - DNAREP1_DM LINE Penelope -523 71 1 1 591 243 0 0 0 chrX 817248 817275 -21605552 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 591 200 196 0 0 chrX 821388 821434 -21601393 + CT-rich Low_complexity Low_complexity 2 47 0 1 591 317 299 0 0 chrX 828041 828175 -21594652 + (CCA)n Simple_repeat Simple_repeat 1 134 0 1 591 21 36 0 0 chrX 828203 828231 -21594596 + GC_rich Low_complexity Low_complexity 1 28 0 1 591 198 103 0 0 chrX 829451 829480 -21593347 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 591 198 91 0 0 chrX 829649 829682 -21593145 + (CAACG)n Simple_repeat Simple_repeat 3 35 0 1 591 245 273 0 0 chrX 829803 829869 -21592958 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 591 24 32 0 0 chrX 831765 831796 -21591031 + AT_rich Low_complexity Low_complexity 1 31 0 1 591 220 220 0 0 chrX 831801 831851 -21590976 + A-rich Low_complexity Low_complexity 1 50 0 1 591 234 45 0 64 chrX 832422 832469 -21590358 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 591 189 0 0 0 chrX 832909 832930 -21589897 + (ATTCG)n Simple_repeat Simple_repeat 2 22 0 1 591 207 170 0 0 chrX 833207 833254 -21589573 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 591 25 31 0 0 chrX 836969 837001 -21585826 + AT_rich Low_complexity Low_complexity 1 32 0 1 591 203 0 37 0 chrX 843218 843245 -21579582 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1 591 202 208 0 0 chrX 847360 847413 -21575414 + T-rich Low_complexity Low_complexity 5 57 0 1 591 205 138 0 0 chrX 848370 848399 -21574428 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 591 204 111 0 0 chrX 849527 849563 -21573264 + (CAAT)n Simple_repeat Simple_repeat 4 39 0 1 591 264 248 9 37 chrX 850488 850597 -21572230 + A-rich Low_complexity Low_complexity 1 106 0 1 591 202 211 0 19 chrX 852965 852986 -21569841 + (TATG)n Simple_repeat Simple_repeat 4 24 0 1 591 243 0 0 0 chrX 852986 853013 -21569814 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 591 202 211 0 19 chrX 853013 853044 -21569783 + (TATG)n Simple_repeat Simple_repeat 2 31 0 1 591 221 267 0 0 chrX 853212 853257 -21569570 + (CATA)n Simple_repeat Simple_repeat 4 48 0 1 591 237 119 0 0 chrX 854340 854382 -21568445 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 591 189 0 0 0 chrX 858113 858134 -21564693 + (A)n Simple_repeat Simple_repeat 1 21 0 1 591 25 31 0 0 chrX 862449 862481 -21560346 + AT_rich Low_complexity Low_complexity 1 32 0 1 591 238 277 0 0 chrX 864745 864810 -21558017 - DNAREP1_DM LINE Penelope -24 570 506 1 591 444 234 60 49 chrX 864829 865013 -21557814 - XDMR Unknown Unknown -175 186 1 1 591 1990 211 80 16 chrX 864883 865509 -21557318 + SAR_DM Satellite Satellite 586 1251 -221 1 591 264 59 0 0 chrX 868001 868035 -21554792 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 591 209 242 30 0 chrX 868596 868662 -21554165 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 591 198 0 0 0 chrX 870710 870732 -21552095 + (ACTTG)n Simple_repeat Simple_repeat 2 23 0 1 591 207 100 0 0 chrX 874484 874514 -21548313 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1 591 21 0 0 0 chrX 876095 876116 -21546711 + AT_rich Low_complexity Low_complexity 1 21 0 1 591 276 30 0 0 chrX 876334 876367 -21546460 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 591 183 42 0 0 chrX 876922 876946 -21545881 + (AGTTG)n Simple_repeat Simple_repeat 2 25 0 1 591 21 0 0 0 chrX 878371 878392 -21544435 + AT_rich Low_complexity Low_complexity 1 21 0 1 591 301 273 21 0 chrX 880702 880845 -21541982 + (TG)n Simple_repeat Simple_repeat 2 147 0 1 591 225 244 0 0 chrX 882080 882125 -21540702 + (TCCG)n Simple_repeat Simple_repeat 1 45 0 1 591 28 61 0 0 chrX 885420 885469 -21537358 + AT_rich Low_complexity Low_complexity 1 49 0 1 591 201 74 0 0 chrX 885537 885564 -21537263 + (GACTG)n Simple_repeat Simple_repeat 5 31 0 1 591 29 0 0 0 chrX 886036 886065 -21536762 + AT_rich Low_complexity Low_complexity 1 29 0 1 591 234 206 0 0 chrX 886189 886262 -21536565 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 591 219 36 0 0 chrX 886675 886703 -21536124 + (GAATG)n Simple_repeat Simple_repeat 4 31 0 1 591 186 71 0 0 chrX 890693 890721 -21532106 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 591 195 42 0 0 chrX 898269 898293 -21524534 + (ATGGTG)n Simple_repeat Simple_repeat 1 24 0 1 591 234 0 0 0 chrX 899884 899910 -21522917 + (GGTTG)n Simple_repeat Simple_repeat 3 28 0 1 591 204 0 83 0 chrX 900837 900873 -21521954 + (TATG)n Simple_repeat Simple_repeat 4 42 0 1 591 188 86 0 28 chrX 900956 900992 -21521835 + (TTCTG)n Simple_repeat Simple_repeat 4 38 0 1 591 542 53 26 0 chrX 904509 904585 -21518242 - TRANSIB4 DNA Transib 0 2610 2533 1 591 384 20 0 20 chrX 904615 904666 -21518161 - TRANSIB4 DNA Transib -2560 50 1 1 591 22 0 0 0 chrX 906638 906660 -21516167 + AT_rich Low_complexity Low_complexity 1 22 0 1 591 183 100 0 0 chrX 908338 908368 -21514459 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 591 243 189 0 0 chrX 909860 909913 -21512914 + C-rich Low_complexity Low_complexity 3 55 0 1 591 23 0 0 0 chrX 910447 910470 -21512357 + AT_rich Low_complexity Low_complexity 1 23 0 1 591 341 89 18 0 chrX 911974 912030 -21510797 - PROTOP_B DNA P -111 1042 986 1 591 538 52 50 38 chrX 912057 912137 -21510690 - PROTOP_B DNA P -845 308 228 1 591 780 141 0 0 chrX 915107 915270 -21507557 + (TAG)n Simple_repeat Simple_repeat 2 164 0 1 591 1050 103 181 5 chrX 916266 916471 -21506356 - FB4_DM DNA Tc1 -41 4048 3808 1 591 498 72 14 0 chrX 916469 916538 -21506289 - FB4_DM DNA Tc1 -4019 70 1 1 592 4415 109 3 43 chrX 918794 919496 -21503331 + DMRT1C LINE R1 1416 2089 -3354 1 592 909 102 0 0 chrX 919529 919657 -21503170 + DMRT1C LINE R1 2851 2978 -2465 1 592 189 0 0 0 chrX 919817 919838 -21502989 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 592 1079 31 0 23 chrX 920015 920148 -21502679 - Baggins1 LINE LOA 0 5453 5324 1 592 898 42 16 16 chrX 920178 920299 -21502528 - Baggins1 LINE LOA -231 5222 5102 1 592 61790 2 0 15 chrX 927439 935019 -21487808 + DM412 LTR Gypsy 1 6897 0 1 592 219 114 0 0 chrX 940193 940228 -21482599 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 592 213 274 0 0 chrX 942510 942561 -21480266 + (AGGTG)n Simple_repeat Simple_repeat 1 51 0 1 592 252 122 0 0 chrX 942619 942660 -21480167 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1 592 195 220 0 0 chrX 949689 949739 -21473088 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 592 234 160 0 0 chrX 951349 951399 -21471428 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 592 186 43 0 0 chrX 952280 952303 -21470524 + (C)n Simple_repeat Simple_repeat 1 23 0 1 592 189 147 0 0 chrX 952495 952529 -21470298 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 592 234 228 35 17 chrX 954085 954143 -21468684 + (CATG)n Simple_repeat Simple_repeat 2 60 0 1 592 25 51 0 0 chrX 957803 957842 -21464985 + AT_rich Low_complexity Low_complexity 1 39 0 1 592 4017 0 0 0 chrX 957843 958271 -21464556 + ROO_LTR LTR Pao 1 428 0 1 592 33950 1 0 3 chrX 958271 962035 -21460792 + ROO_I LTR Pao 1 3754 -4502 1 592 37551 0 0 0 chrX 962029 966151 -21456676 + ROO_I LTR Pao 4134 8256 0 1 592 4017 0 0 0 chrX 966151 966579 -21456248 + ROO_LTR LTR Pao 1 428 0 1 592 237 232 0 0 chrX 968076 968132 -21454695 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 1 592 408 121 22 11 chrX 968259 968351 -21454476 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 592 237 33 0 0 chrX 968941 968971 -21453856 + (TCGGG)n Simple_repeat Simple_repeat 1 30 0 1 592 21 0 0 0 chrX 976453 976474 -21446353 + AT_rich Low_complexity Low_complexity 1 21 0 1 592 25 31 0 0 chrX 979834 979866 -21442961 + AT_rich Low_complexity Low_complexity 1 32 0 1 592 185 180 20 0 chrX 981362 981412 -21441415 + (CAAG)n Simple_repeat Simple_repeat 1 51 0 1 592 204 163 23 0 chrX 982133 982176 -21440651 + (TTGG)n Simple_repeat Simple_repeat 1 44 0 1 592 23 33 0 0 chrX 982821 982851 -21439976 + AT_rich Low_complexity Low_complexity 1 30 0 1 592 207 281 0 30 chrX 984557 984623 -21438204 + A-rich Low_complexity Low_complexity 4 67 0 1 592 215 186 0 23 chrX 984980 985024 -21437803 + T-rich Low_complexity Low_complexity 1 43 0 1 592 249 83 0 0 chrX 985701 985737 -21437090 + (CAG)n Simple_repeat Simple_repeat 1 36 0 1 592 279 93 0 0 chrX 991563 991606 -21431221 + (CAT)n Simple_repeat Simple_repeat 1 43 0 1 592 215 239 15 0 chrX 992439 992506 -21430321 + (TTG)n Simple_repeat Simple_repeat 1 68 0 1 592 231 36 0 0 chrX 995840 995868 -21426959 + (CACCAT)n Simple_repeat Simple_repeat 6 33 0 1 592 210 91 0 0 chrX 996975 997008 -21425819 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 1 592 189 107 0 0 chrX 997153 997181 -21425646 + (ATG)n Simple_repeat Simple_repeat 1 28 0 1 592 24 0 0 0 chrX 998630 998654 -21424173 + AT_rich Low_complexity Low_complexity 1 24 0 1 592 210 37 0 0 chrX 999525 999552 -21423275 + (A)n Simple_repeat Simple_repeat 1 27 0 1 592 40 0 0 0 chrX 1000673 1000713 -21422114 + AT_rich Low_complexity Low_complexity 1 40 0 1 592 22 0 0 0 chrX 1002558 1002580 -21420247 + AT_rich Low_complexity Low_complexity 1 22 0 1 592 201 176 0 0 chrX 1003798 1003832 -21418995 + T-rich Low_complexity Low_complexity 1 34 0 1 592 258 32 0 0 chrX 1005237 1005268 -21417559 + (CAGA)n Simple_repeat Simple_repeat 1 31 0 1 592 195 69 0 0 chrX 1007823 1007852 -21414975 + (TTCTG)n Simple_repeat Simple_repeat 2 30 0 1 592 194 0 0 37 chrX 1008094 1008121 -21414706 + (CACTC)n Simple_repeat Simple_repeat 4 29 0 1 592 210 71 0 0 chrX 1009435 1009463 -21413364 + (ATGGTG)n Simple_repeat Simple_repeat 4 31 0 1 592 249 33 0 0 chrX 1009829 1009859 -21412968 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 1 592 24 0 0 0 chrX 1012851 1012875 -21409952 + AT_rich Low_complexity Low_complexity 1 24 0 1 592 225 108 0 0 chrX 1015154 1015191 -21407636 + (T)n Simple_repeat Simple_repeat 1 37 0 1 592 204 40 0 0 chrX 1016928 1016953 -21405874 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 592 246 22 64 21 chrX 1017532 1017579 -21405248 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 1 592 183 129 0 0 chrX 1018868 1018899 -21403928 + (CGAAA)n Simple_repeat Simple_repeat 4 34 0 1 592 203 61 30 0 chrX 1019696 1019729 -21403098 + (TTATG)n Simple_repeat Simple_repeat 5 38 0 1 592 22 35 0 0 chrX 1020718 1020747 -21402080 + AT_rich Low_complexity Low_complexity 1 29 0 1 592 21 36 0 0 chrX 1023564 1023592 -21399235 + AT_rich Low_complexity Low_complexity 1 28 0 1 592 253 205 32 179 chrX 1024697 1024792 -21398035 - PENELOPE LINE Penelope -184 3977 3890 1 592 32 0 0 0 chrX 1024847 1024879 -21397948 + AT_rich Low_complexity Low_complexity 1 32 0 1 592 198 0 0 0 chrX 1025835 1025857 -21396970 + (ATTTG)n Simple_repeat Simple_repeat 3 24 0 1 592 209 299 0 20 chrX 1033160 1033259 -21389568 + GA-rich Low_complexity Low_complexity 2 98 0 1 592 201 262 47 12 chrX 1033382 1033467 -21389360 + (CAGA)n Simple_repeat Simple_repeat 3 90 0 1 592 205 302 0 0 chrX 1033394 1033457 -21389370 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 1 592 198 265 0 0 chrX 1035538 1035606 -21387221 + (TCTG)n Simple_repeat Simple_repeat 3 70 0 1 592 336 42 82 31 chrX 1036879 1036976 -21385851 + (TATAA)n Simple_repeat Simple_repeat 2 103 0 1 592 189 0 0 0 chrX 1037918 1037939 -21384888 + (T)n Simple_repeat Simple_repeat 1 21 0 1 592 1498 127 59 8 chrX 1039020 1039258 -21383569 - DNAREP1_DM LINE Penelope -1 593 344 1 592 522 208 71 16 chrX 1039294 1039421 -21383406 - DNAREP1_DM LINE Penelope -460 134 1 1 592 2196 86 81 18 chrX 1040189 1040522 -21382305 - DNAREP1_DM LINE Penelope 0 594 241 1 593 243 0 0 0 chrX 1049116 1049143 -21373684 + (CACTC)n Simple_repeat Simple_repeat 5 31 0 1 593 216 0 0 0 chrX 1049661 1049685 -21373142 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 593 192 77 0 0 chrX 1050222 1050248 -21372579 + (ACCG)n Simple_repeat Simple_repeat 2 27 0 1 593 201 268 0 0 chrX 1051195 1051236 -21371591 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1 593 372 143 0 0 chrX 1055932 1056002 -21366825 + (TTTTG)n Simple_repeat Simple_repeat 3 72 0 1 593 189 0 0 0 chrX 1063055 1063076 -21359751 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 593 180 0 0 0 chrX 1067738 1067758 -21355069 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 593 23 54 0 0 chrX 1067970 1068007 -21354820 + AT_rich Low_complexity Low_complexity 1 37 0 1 593 32 0 0 0 chrX 1071604 1071636 -21351191 + AT_rich Low_complexity Low_complexity 1 32 0 1 593 207 69 0 0 chrX 1073278 1073307 -21349520 + (CACAG)n Simple_repeat Simple_repeat 2 30 0 1 593 22 35 0 0 chrX 1074034 1074063 -21348764 + AT_rich Low_complexity Low_complexity 1 29 0 1 593 183 42 0 0 chrX 1084865 1084889 -21337938 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 593 341 58 19 0 chrX 1086678 1086730 -21336097 + (CTG)n Simple_repeat Simple_repeat 1 53 0 1 593 198 71 0 0 chrX 1087319 1087347 -21335480 + (CTCA)n Simple_repeat Simple_repeat 3 30 0 1 593 203 234 0 0 chrX 1089330 1089377 -21333450 + (CAG)n Simple_repeat Simple_repeat 1 47 0 1 593 234 152 0 0 chrX 1089510 1089569 -21333258 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 593 228 183 16 16 chrX 1089714 1089775 -21333052 + (CAG)n Simple_repeat Simple_repeat 1 61 0 1 593 35 41 0 0 chrX 1093904 1093953 -21328874 + AT_rich Low_complexity Low_complexity 1 49 0 1 593 191 114 29 0 chrX 1094355 1094390 -21328437 + (TTCTCC)n Simple_repeat Simple_repeat 3 38 0 1 593 200 176 0 0 chrX 1096245 1096279 -21326548 + GA-rich Low_complexity Low_complexity 2 35 0 1 593 192 111 0 0 chrX 1097387 1097423 -21325404 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 593 30 0 0 0 chrX 1099419 1099449 -21323378 + AT_rich Low_complexity Low_complexity 1 30 0 1 593 265 250 0 83 chrX 1101071 1101180 -21321647 + ROO_I LTR Pao 644 743 -7513 1 593 23 0 0 0 chrX 1102922 1102945 -21319882 + AT_rich Low_complexity Low_complexity 1 23 0 1 593 21 71 0 0 chrX 1103576 1103618 -21319209 + AT_rich Low_complexity Low_complexity 1 42 0 1 593 212 231 31 0 chrX 1109709 1109774 -21313053 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 593 182 62 31 0 chrX 1110214 1110246 -21312581 + (CCTG)n Simple_repeat Simple_repeat 4 36 0 1 593 241 184 20 0 chrX 1111331 1111380 -21311447 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 1 593 222 118 0 0 chrX 1113025 1113059 -21309768 + (CTG)n Simple_repeat Simple_repeat 1 34 0 1 593 289 245 26 53 chrX 1113857 1114008 -21308819 + (CTG)n Simple_repeat Simple_repeat 1 147 0 1 593 189 147 0 0 chrX 1114117 1114151 -21308676 + (CTG)n Simple_repeat Simple_repeat 1 34 0 1 593 265 182 0 120 chrX 1114544 1114644 -21308183 - ROO_I LTR Pao -7529 727 640 1 593 395 174 0 52 chrX 1114787 1114902 -21307925 - ROO_I LTR Pao -7514 742 634 1 593 244 138 31 0 chrX 1115399 1115464 -21307363 + (CTG)n Simple_repeat Simple_repeat 3 69 0 1 593 26 30 0 0 chrX 1115878 1115911 -21306916 + AT_rich Low_complexity Low_complexity 1 33 0 1 593 189 0 0 0 chrX 1116291 1116312 -21306515 + (T)n Simple_repeat Simple_repeat 1 21 0 1 593 314 231 9 19 chrX 1116625 1116731 -21306096 + (TTG)n Simple_repeat Simple_repeat 3 107 0 1 593 24 0 0 0 chrX 1118262 1118286 -21304541 + AT_rich Low_complexity Low_complexity 1 24 0 1 593 198 0 0 0 chrX 1118773 1118795 -21304032 + (TCG)n Simple_repeat Simple_repeat 2 23 0 1 593 198 0 0 0 chrX 1118919 1118941 -21303886 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 593 213 194 0 0 chrX 1121666 1121702 -21301125 + (TCG)n Simple_repeat Simple_repeat 2 37 0 1 593 204 40 0 0 chrX 1123342 1123367 -21299460 + (T)n Simple_repeat Simple_repeat 1 25 0 1 593 189 74 0 0 chrX 1123423 1123450 -21299377 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 593 186 43 0 0 chrX 1123853 1123876 -21298951 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 1 593 198 71 0 0 chrX 1123975 1124003 -21298824 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 593 206 270 13 26 chrX 1124960 1125036 -21297791 + (CATA)n Simple_repeat Simple_repeat 2 76 0 1 593 221 54 0 75 chrX 1126519 1126559 -21296268 + (GGAGAA)n Simple_repeat Simple_repeat 3 39 0 1 593 260 250 0 0 chrX 1128091 1128147 -21294680 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 593 189 147 0 0 chrX 1128207 1128241 -21294586 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 593 31 44 0 0 chrX 1129306 1129351 -21293476 + AT_rich Low_complexity Low_complexity 1 45 0 1 593 212 148 36 18 chrX 1138229 1138284 -21284543 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 593 354 45 0 0 chrX 1138831 1138875 -21283952 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 593 25 0 0 0 chrX 1139032 1139057 -21283770 + AT_rich Low_complexity Low_complexity 1 25 0 1 593 192 200 0 0 chrX 1140800 1140845 -21281982 + (TTG)n Simple_repeat Simple_repeat 1 45 0 1 593 292 269 0 0 chrX 1141063 1141167 -21281660 - ROO_I LTR Pao -7513 743 640 1 593 264 59 0 0 chrX 1141290 1141324 -21281503 + (CTG)n Simple_repeat Simple_repeat 1 34 0 1 593 222 308 0 0 chrX 1141864 1141929 -21280898 + (CTG)n Simple_repeat Simple_repeat 3 67 0 1 593 204 97 0 0 chrX 1143570 1143601 -21279226 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 593 222 37 0 0 chrX 1144265 1144292 -21278535 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 1 593 268 264 0 0 chrX 1144371 1144424 -21278403 + (TCCG)n Simple_repeat Simple_repeat 4 56 0 1 593 279 114 0 0 chrX 1144579 1144623 -21278204 + (ACTG)n Simple_repeat Simple_repeat 3 46 0 1 593 240 59 0 0 chrX 1145708 1145742 -21277085 + (T)n Simple_repeat Simple_repeat 1 34 0 1 593 230 160 20 0 chrX 1146196 1146246 -21276581 + (TATG)n Simple_repeat Simple_repeat 1 51 0 1 593 210 244 0 0 chrX 1146573 1146618 -21276209 + (TATG)n Simple_repeat Simple_repeat 4 48 0 1 593 258 32 0 0 chrX 1147284 1147315 -21275512 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 593 204 40 0 0 chrX 1147358 1147383 -21275444 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 593 258 125 0 0 chrX 1151550 1151598 -21271229 + (CAT)n Simple_repeat Simple_repeat 2 49 0 1 593 34 0 0 0 chrX 1152771 1152805 -21270022 + AT_rich Low_complexity Low_complexity 1 34 0 1 593 201 133 0 0 chrX 1154441 1154471 -21268356 + (CAAAC)n Simple_repeat Simple_repeat 5 34 0 1 593 189 0 0 0 chrX 1155002 1155023 -21267804 + (A)n Simple_repeat Simple_repeat 1 21 0 1 593 183 146 0 0 chrX 1155544 1155585 -21267242 + (CGATG)n Simple_repeat Simple_repeat 4 44 0 1 593 23 0 0 0 chrX 1156387 1156410 -21266417 + AT_rich Low_complexity Low_complexity 1 23 0 1 593 25 0 0 0 chrX 1158552 1158577 -21264250 + AT_rich Low_complexity Low_complexity 1 25 0 1 593 219 114 0 0 chrX 1159118 1159153 -21263674 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 593 201 231 0 0 chrX 1162976 1163015 -21259812 + (TTCGGG)n Simple_repeat Simple_repeat 2 40 0 1 593 216 97 0 0 chrX 1170507 1170538 -21252289 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 594 222 274 0 0 chrX 1189175 1189226 -21233601 + (CTG)n Simple_repeat Simple_repeat 1 51 0 1 594 251 297 0 0 chrX 1189494 1189568 -21233259 + (CTG)n Simple_repeat Simple_repeat 1 74 0 1 594 318 239 48 27 chrX 1190118 1190264 -21232563 + (CAAGC)n Simple_repeat Simple_repeat 1 149 0 1 594 185 94 31 0 chrX 1197282 1197314 -21225513 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 594 251 218 12 49 chrX 1197461 1197543 -21225284 + A-rich Low_complexity Low_complexity 1 79 0 1 594 267 122 0 0 chrX 1199556 1199605 -21223222 + (GATTG)n Simple_repeat Simple_repeat 4 52 0 1 594 312 180 0 0 chrX 1205364 1205425 -21217402 + DNAREP1_DM LINE Penelope 1 61 -533 1 594 314 102 0 58 chrX 1205512 1205564 -21217263 + DNAREP1_DM LINE Penelope 546 594 0 1 594 216 67 0 0 chrX 1215005 1215035 -21207792 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 594 192 149 0 0 chrX 1226100 1226147 -21196680 + (TGG)n Simple_repeat Simple_repeat 2 48 0 1 594 231 157 0 0 chrX 1226398 1226449 -21196378 + (TGG)n Simple_repeat Simple_repeat 3 53 0 1 594 202 182 0 0 chrX 1227982 1228015 -21194812 + (ACCG)n Simple_repeat Simple_repeat 4 36 0 1 594 219 114 0 0 chrX 1228868 1228903 -21193924 + (AACTG)n Simple_repeat Simple_repeat 1 35 0 1 594 198 143 0 0 chrX 1229457 1229492 -21193335 + (ATG)n Simple_repeat Simple_repeat 3 37 0 1 594 230 330 0 0 chrX 1231045 1231133 -21191694 + (TTCGGG)n Simple_repeat Simple_repeat 3 90 0 1 594 504 130 0 0 chrX 1232287 1232379 -21190448 + (CTG)n Simple_repeat Simple_repeat 3 94 0 1 594 30 0 0 0 chrX 1235996 1236026 -21186801 + AT_rich Low_complexity Low_complexity 1 30 0 1 594 219 204 0 0 chrX 1236329 1236383 -21186444 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 594 228 213 0 0 chrX 1236844 1236905 -21185922 + (CAA)n Simple_repeat Simple_repeat 1 61 0 1 594 226 146 24 0 chrX 1247521 1247562 -21175265 + (CTCCG)n Simple_repeat Simple_repeat 4 45 0 1 594 258 259 12 12 chrX 1249902 1249984 -21172843 + GA-rich Low_complexity Low_complexity 1 82 0 1 594 12406 3 0 0 chrX 1251867 1253278 -21169549 - IVK_DM LINE I 0 5402 3992 1 594 41373 0 0 0 chrX 1253275 1257999 -21164828 + DOC LINE Jockey 3 4725 0 1 594 33417 14 8 0 chrX 1258000 1261971 -21160856 - IVK_DM LINE I -1400 4002 1 1 594 238 377 6 6 chrX 1265488 1265648 -21157179 + (CGA)n Simple_repeat Simple_repeat 1 160 0 1 594 239 302 8 8 chrX 1266701 1266831 -21155996 + (CACCAT)n Simple_repeat Simple_repeat 4 133 0 1 594 252 176 0 0 chrX 1266832 1266900 -21155927 + (CAA)n Simple_repeat Simple_repeat 1 68 0 1 594 246 156 0 0 chrX 1267010 1267055 -21155772 + (TGG)n Simple_repeat Simple_repeat 2 46 0 1 594 188 67 0 32 chrX 1275018 1275049 -21147778 + (CGTTG)n Simple_repeat Simple_repeat 1 30 0 1 594 222 105 0 0 chrX 1275660 1275698 -21147129 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 594 186 103 0 0 chrX 1275971 1276000 -21146827 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 594 222 231 0 0 chrX 1276360 1276425 -21146402 + (ATCTG)n Simple_repeat Simple_repeat 2 66 0 1 594 248 93 0 44 chrX 1280290 1280335 -21142492 + (GGA)n Simple_repeat Simple_repeat 2 44 0 1 594 465 19 0 0 chrX 1281087 1281141 -21141686 + (TTCCC)n Simple_repeat Simple_repeat 4 57 0 1 594 195 42 0 0 chrX 1281168 1281192 -21141635 + (CACTC)n Simple_repeat Simple_repeat 3 26 0 1 594 222 213 0 0 chrX 1281306 1281353 -21141474 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 594 195 42 0 0 chrX 1282058 1282082 -21140745 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 594 309 89 0 0 chrX 1282236 1282281 -21140546 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 594 189 0 0 0 chrX 1282436 1282457 -21140370 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 594 208 276 17 0 chrX 1282490 1282548 -21140279 + G-rich Low_complexity Low_complexity 3 61 0 1 594 237 98 0 0 chrX 1283333 1283374 -21139453 + (GAGTG)n Simple_repeat Simple_repeat 3 43 0 1 594 207 290 0 0 chrX 1283997 1284059 -21138768 + (CGG)n Simple_repeat Simple_repeat 2 63 0 1 594 250 273 0 0 chrX 1288633 1288699 -21134128 + (CGA)n Simple_repeat Simple_repeat 1 66 0 1 594 227 31 0 30 chrX 1289465 1289498 -21133329 + (TTCCG)n Simple_repeat Simple_repeat 4 35 0 1 594 21 0 0 0 chrX 1289532 1289553 -21133274 + AT_rich Low_complexity Low_complexity 1 21 0 1 594 237 222 0 65 chrX 1298320 1298397 -21124430 + (CAGC)n Simple_repeat Simple_repeat 1 72 0 1 594 182 128 26 0 chrX 1301056 1301095 -21121732 + (CGAAA)n Simple_repeat Simple_repeat 1 40 0 1 594 225 119 0 0 chrX 1303748 1303790 -21119037 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 594 220 115 15 76 chrX 1305910 1305976 -21116851 + (CAG)n Simple_repeat Simple_repeat 2 63 0 1 594 247 200 0 20 chrX 1306073 1306124 -21116703 + (GTGTG)n Simple_repeat Simple_repeat 1 50 0 1 594 255 250 12 70 chrX 1307862 1308034 -21114793 + A-rich Low_complexity Low_complexity 4 165 0 1 594 195 173 0 0 chrX 1309911 1309963 -21112864 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 1 595 239 220 0 0 chrX 1314031 1314090 -21108737 + GA-rich Low_complexity Low_complexity 1 59 0 1 595 273 29 0 0 chrX 1315390 1315424 -21107403 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 595 26 0 0 0 chrX 1319985 1320011 -21102816 + AT_rich Low_complexity Low_complexity 1 26 0 1 595 405 70 0 0 chrX 1321605 1321662 -21101165 + (CTAA)n Simple_repeat Simple_repeat 1 57 0 1 595 384 169 0 0 chrX 1322157 1322234 -21100593 + (CAT)n Simple_repeat Simple_repeat 3 79 0 1 595 201 129 0 0 chrX 1324073 1324104 -21098723 + (ACTG)n Simple_repeat Simple_repeat 3 33 0 1 595 309 125 0 0 chrX 1328335 1328391 -21094436 + (CTG)n Simple_repeat Simple_repeat 3 58 0 1 595 27 29 0 0 chrX 1343449 1343483 -21079344 + AT_rich Low_complexity Low_complexity 1 34 0 1 595 218 200 14 71 chrX 1344389 1344489 -21078338 + (GGATG)n Simple_repeat Simple_repeat 1 94 0 1 595 212 191 21 0 chrX 1344454 1344501 -21078326 + (GAATG)n Simple_repeat Simple_repeat 4 51 0 1 595 275 130 0 18 chrX 1345320 1345375 -21077452 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 595 186 43 0 0 chrX 1345545 1345568 -21077259 + (CAGAT)n Simple_repeat Simple_repeat 4 26 0 1 595 55 29 0 0 chrX 1348214 1348283 -21074544 + AT_rich Low_complexity Low_complexity 1 69 0 1 595 519 309 56 29 chrX 1360145 1360522 -21062305 - SAR_DM Satellite Satellite -862 610 224 1 595 276 328 57 34 chrX 1360390 1360567 -21062260 + XDMR Unknown Unknown 1 181 -180 1 595 180 125 0 0 chrX 1374703 1374735 -21048092 + (CAGCC)n Simple_repeat Simple_repeat 1 32 0 1 595 297 244 0 0 chrX 1375482 1375568 -21047259 + (CATA)n Simple_repeat Simple_repeat 2 87 0 1 595 23 0 0 0 chrX 1378177 1378200 -21044627 + AT_rich Low_complexity Low_complexity 1 23 0 1 595 202 246 0 16 chrX 1379604 1379666 -21043161 + T-rich Low_complexity Low_complexity 5 65 0 1 595 201 74 0 0 chrX 1379771 1379798 -21043029 + (TATATG)n Simple_repeat Simple_repeat 1 27 0 1 595 205 250 18 0 chrX 1380884 1380940 -21041887 + (TGGG)n Simple_repeat Simple_repeat 3 59 0 1 595 211 176 0 0 chrX 1392305 1392339 -21030488 + (GCCTG)n Simple_repeat Simple_repeat 2 35 0 1 595 209 313 0 0 chrX 1396579 1396646 -21026181 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 595 186 209 0 0 chrX 1397405 1397448 -21025379 + (CAGGG)n Simple_repeat Simple_repeat 1 43 0 1 595 249 33 0 0 chrX 1398242 1398272 -21024555 + (CAGG)n Simple_repeat Simple_repeat 1 30 0 1 595 318 132 0 0 chrX 1399811 1399864 -21022963 + (TTGTG)n Simple_repeat Simple_repeat 3 55 0 1 595 343 141 26 0 chrX 1400722 1400800 -21022027 + (TTG)n Simple_repeat Simple_repeat 3 82 0 1 595 230 250 0 15 chrX 1401104 1401169 -21021658 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 595 249 108 0 0 chrX 1401331 1401368 -21021459 + (TTG)n Simple_repeat Simple_repeat 3 39 0 1 595 318 138 0 0 chrX 1404967 1405025 -21017802 + (CAT)n Simple_repeat Simple_repeat 1 58 0 1 595 1531 52 0 5 chrX 1408222 1408417 -21014410 + PROTOP_A DNA P 1 194 -911 1 595 427 0 0 0 chrX 1408436 1408485 -21014342 + PROTOP_A DNA P 1055 1104 -1 1 595 255 125 0 0 chrX 1409929 1409969 -21012858 + (CAGC)n Simple_repeat Simple_repeat 4 43 0 1 595 387 0 0 0 chrX 1412152 1412195 -21010632 + (T)n Simple_repeat Simple_repeat 1 43 0 1 595 44086 6 0 2 chrX 1412195 1417216 -21005611 + LINEJ1_DM LINE Jockey 6 5019 -1 1 595 1973 0 0 4 chrX 1417217 1417467 -21005360 - LINEJ1_DM LINE Jockey -13 5007 4759 1 595 180 0 0 0 chrX 1420952 1420972 -21001855 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 595 414 85 0 0 chrX 1422200 1422259 -21000568 + (CACTC)n Simple_repeat Simple_repeat 4 62 0 1 595 189 74 0 0 chrX 1423803 1423830 -20998997 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 595 237 274 0 64 chrX 1423945 1424054 -20998773 - DOC3_DM LINE Jockey -4145 595 494 1 595 302 253 0 0 chrX 1423972 1424055 -20998772 - ROO_I LTR Pao -7523 733 651 1 595 203 184 0 0 chrX 1424445 1424483 -20998344 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1 595 21 36 0 0 chrX 1424531 1424559 -20998268 + AT_rich Low_complexity Low_complexity 1 28 0 1 595 220 206 0 56 chrX 1424823 1424895 -20997932 + (TCCTG)n Simple_repeat Simple_repeat 3 70 0 1 595 183 100 0 0 chrX 1427096 1427126 -20995701 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 1 595 300 53 0 0 chrX 1428257 1428295 -20994532 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 595 209 71 71 0 chrX 1428639 1428681 -20994146 + (CATCC)n Simple_repeat Simple_repeat 1 45 0 1 595 212 196 0 35 chrX 1430418 1430476 -20992351 + (CCCA)n Simple_repeat Simple_repeat 2 57 0 1 595 252 0 0 0 chrX 1431768 1431796 -20991031 + (T)n Simple_repeat Simple_repeat 1 28 0 1 595 25 51 0 0 chrX 1432333 1432372 -20990455 + AT_rich Low_complexity Low_complexity 1 39 0 1 595 21 36 0 0 chrX 1432556 1432584 -20990243 + AT_rich Low_complexity Low_complexity 1 28 0 1 595 277 235 0 12 chrX 1432614 1432696 -20990131 + (TTGG)n Simple_repeat Simple_repeat 3 83 0 1 595 195 204 0 0 chrX 1432842 1432891 -20989936 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 595 1202 324 73 40 chrX 1433541 1434893 -20987934 - SAR_DM Satellite Satellite -243 1395 1 1 595 261 75 0 0 chrX 1437263 1437303 -20985524 + (CAG)n Simple_repeat Simple_repeat 3 42 0 1 595 23 33 0 0 chrX 1437447 1437477 -20985350 + AT_rich Low_complexity Low_complexity 1 30 0 1 595 21 71 0 0 chrX 1437752 1437794 -20985033 + AT_rich Low_complexity Low_complexity 1 42 0 1 595 276 100 0 0 chrX 1438657 1438697 -20984130 + (CGGGA)n Simple_repeat Simple_repeat 2 41 0 1 595 225 167 18 36 chrX 1440898 1440954 -20981873 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 1 595 213 39 0 0 chrX 1441377 1441403 -20981424 + (CGAGG)n Simple_repeat Simple_repeat 2 27 0 1 596 204 191 138 0 chrX 1445494 1445588 -20977239 + (CCGAA)n Simple_repeat Simple_repeat 4 110 0 1 596 225 83 0 0 chrX 1446070 1446106 -20976721 + (TTTCC)n Simple_repeat Simple_repeat 3 38 0 1 596 232 246 0 0 chrX 1449797 1449858 -20972969 + (TTG)n Simple_repeat Simple_repeat 1 61 0 1 596 243 329 0 0 chrX 1450178 1450336 -20972491 + (TTG)n Simple_repeat Simple_repeat 3 160 0 1 596 218 196 0 0 chrX 1454839 1454885 -20967942 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 596 219 114 0 0 chrX 1455460 1455495 -20967332 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 596 189 0 0 0 chrX 1456657 1456678 -20966149 + (GA)n Simple_repeat Simple_repeat 2 22 0 1 596 180 200 0 0 chrX 1458355 1458395 -20964432 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 596 198 0 0 0 chrX 1459004 1459026 -20963801 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 596 198 0 0 0 chrX 1459088 1459110 -20963717 + (GCTG)n Simple_repeat Simple_repeat 4 25 0 1 596 237 65 0 0 chrX 1460631 1460662 -20962165 + (TGG)n Simple_repeat Simple_repeat 1 31 0 1 596 351 113 0 0 chrX 1460925 1460978 -20961849 + (TTTCG)n Simple_repeat Simple_repeat 2 54 0 1 596 180 0 0 0 chrX 1461004 1461024 -20961803 + (CATG)n Simple_repeat Simple_repeat 3 22 0 1 596 192 40 0 0 chrX 1461737 1461762 -20961065 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 596 14121 1 0 0 chrX 1461762 1463476 -20959351 - I_DM LINE I -774 5457 3744 1 596 189 0 0 0 chrX 1464022 1464043 -20958784 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 596 210 71 0 0 chrX 1464530 1464558 -20958269 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 1 596 21 0 0 75 chrX 1464792 1464832 -20957995 + AT_rich Low_complexity Low_complexity 1 37 0 1 596 203 184 0 20 chrX 1465653 1465703 -20957124 + (CCCA)n Simple_repeat Simple_repeat 1 49 0 1 596 194 233 0 16 chrX 1465821 1465882 -20956945 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 1 596 219 188 0 0 chrX 1466009 1466057 -20956770 + T-rich Low_complexity Low_complexity 1 48 0 1 596 285 75 0 0 chrX 1466880 1466920 -20955907 + (T)n Simple_repeat Simple_repeat 1 40 0 1 596 224 235 0 0 chrX 1468190 1468241 -20954586 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 1 596 306 106 0 0 chrX 1468817 1468864 -20953963 + (ATG)n Simple_repeat Simple_repeat 1 47 0 1 596 200 258 22 33 chrX 1469597 1469689 -20953138 + (CAAAC)n Simple_repeat Simple_repeat 3 93 0 1 596 231 143 34 51 chrX 1471321 1471380 -20951447 + A-rich Low_complexity Low_complexity 4 61 0 1 596 210 37 0 0 chrX 1471419 1471446 -20951381 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 596 261 172 0 0 chrX 1473164 1473228 -20949599 + GA-rich Low_complexity Low_complexity 1 64 0 1 596 210 71 0 0 chrX 1473588 1473616 -20949211 + (CACAG)n Simple_repeat Simple_repeat 5 32 0 1 596 220 171 0 0 chrX 1474277 1474312 -20948515 + G-rich Low_complexity Low_complexity 3 37 0 1 596 234 0 0 0 chrX 1474335 1474361 -20948466 + (A)n Simple_repeat Simple_repeat 1 26 0 1 596 414 53 0 0 chrX 1474866 1474923 -20947904 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 596 255 31 0 0 chrX 1475534 1475566 -20947261 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 596 22 0 0 0 chrX 1476089 1476111 -20946716 + AT_rich Low_complexity Low_complexity 1 22 0 1 596 195 167 0 0 chrX 1476952 1476994 -20945833 + CT-rich Low_complexity Low_complexity 2 43 0 1 596 21 36 0 0 chrX 1478529 1478557 -20944270 + AT_rich Low_complexity Low_complexity 1 28 0 1 596 27 0 0 0 chrX 1479418 1479445 -20943382 + AT_rich Low_complexity Low_complexity 1 27 0 1 596 324 64 0 0 chrX 1479807 1479854 -20942973 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 596 212 154 0 0 chrX 1480648 1480687 -20942140 + (CAG)n Simple_repeat Simple_repeat 1 39 0 1 596 180 167 0 0 chrX 1481264 1481312 -20941515 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 596 189 196 0 0 chrX 1481402 1481448 -20941379 + A-rich Low_complexity Low_complexity 1 46 0 1 596 246 170 19 0 chrX 1482498 1482551 -20940276 + (CAGGA)n Simple_repeat Simple_repeat 4 57 0 1 596 203 133 22 0 chrX 1483543 1483588 -20939239 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 596 258 143 0 0 chrX 1484048 1484097 -20938730 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 596 218 151 0 36 chrX 1484819 1484874 -20937953 + (TATG)n Simple_repeat Simple_repeat 1 53 0 1 596 229 290 14 0 chrX 1484921 1484990 -20937837 + (CCG)n Simple_repeat Simple_repeat 1 70 0 1 596 22 0 0 0 chrX 1485126 1485148 -20937679 + AT_rich Low_complexity Low_complexity 1 22 0 1 596 32 26 0 0 chrX 1486649 1486688 -20936139 + AT_rich Low_complexity Low_complexity 1 39 0 1 596 216 196 0 0 chrX 1486852 1486898 -20935929 + A-rich Low_complexity Low_complexity 4 49 0 1 596 210 71 0 0 chrX 1486936 1486964 -20935863 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 596 216 0 0 0 chrX 1487582 1487606 -20935221 + (CAGC)n Simple_repeat Simple_repeat 3 26 0 1 596 200 259 19 0 chrX 1488050 1488104 -20934723 + (CGG)n Simple_repeat Simple_repeat 2 56 0 1 596 216 67 0 0 chrX 1488984 1489014 -20933813 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 596 243 157 0 0 chrX 1489421 1489472 -20933355 + (TGG)n Simple_repeat Simple_repeat 1 51 0 1 596 186 43 0 0 chrX 1492235 1492258 -20930569 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 596 243 61 0 0 chrX 1492391 1492424 -20930403 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 596 189 0 0 0 chrX 1492918 1492939 -20929888 + (A)n Simple_repeat Simple_repeat 1 21 0 1 596 222 156 0 0 chrX 1496415 1496460 -20926367 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 596 214 162 0 0 chrX 1496548 1496585 -20926242 + (CACCC)n Simple_repeat Simple_repeat 5 41 0 1 596 216 0 0 0 chrX 1497880 1497904 -20924923 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 596 21 0 0 0 chrX 1498382 1498403 -20924424 + AT_rich Low_complexity Low_complexity 1 21 0 1 596 183 80 0 0 chrX 1500095 1500120 -20922707 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 596 217 235 0 0 chrX 1500463 1500514 -20922313 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 596 276 111 0 0 chrX 1500547 1500592 -20922235 + (TAG)n Simple_repeat Simple_repeat 1 45 0 1 596 273 98 0 0 chrX 1501922 1501963 -20920864 + (T)n Simple_repeat Simple_repeat 1 41 0 1 596 250 67 0 43 chrX 1502149 1502196 -20920631 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 596 201 222 0 0 chrX 1506019 1506055 -20916772 + (CCG)n Simple_repeat Simple_repeat 3 38 0 1 596 201 293 0 0 chrX 1506953 1507011 -20915816 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 596 249 155 0 0 chrX 1507239 1507297 -20915530 + (CATATA)n Simple_repeat Simple_repeat 4 61 0 1 596 245 245 0 0 chrX 1514785 1514834 -20907993 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 596 180 152 0 0 chrX 1514964 1514997 -20907830 + (CAAAG)n Simple_repeat Simple_repeat 2 34 0 1 596 330 123 0 0 chrX 1517371 1517428 -20905399 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 596 228 86 0 0 chrX 1518366 1518401 -20904426 + (CAA)n Simple_repeat Simple_repeat 3 37 0 1 596 207 100 0 0 chrX 1519186 1519216 -20903611 + (TATG)n Simple_repeat Simple_repeat 3 32 0 1 596 300 27 0 0 chrX 1519557 1519594 -20903233 + (GGAA)n Simple_repeat Simple_repeat 1 37 0 1 596 231 260 0 0 chrX 1520323 1520373 -20902454 + (TCTCTG)n Simple_repeat Simple_repeat 4 53 0 1 596 180 0 0 0 chrX 1520733 1520753 -20902074 + (TCCG)n Simple_repeat Simple_repeat 1 20 0 1 596 216 204 0 0 chrX 1520971 1521015 -20901812 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 596 192 77 0 0 chrX 1521191 1521217 -20901610 + (CCCCAA)n Simple_repeat Simple_repeat 2 27 0 1 596 219 234 0 0 chrX 1521362 1521426 -20901401 + (CAGAGA)n Simple_repeat Simple_repeat 1 64 0 1 596 189 107 0 0 chrX 1521729 1521757 -20901070 + (TATG)n Simple_repeat Simple_repeat 1 28 0 1 596 4421 0 0 0 chrX 1522061 1522556 -20900271 - GTWIN_LTR LTR Gypsy 0 495 1 1 596 57499 0 0 0 chrX 1522556 1528977 -20893850 - GTWIN_I LTR Gypsy 0 6421 1 1 596 4421 0 0 0 chrX 1528977 1529472 -20893355 - GTWIN_LTR LTR Gypsy 0 495 1 1 596 213 189 13 63 chrX 1529523 1529602 -20893225 + (GGATG)n Simple_repeat Simple_repeat 3 77 0 1 596 308 297 7 26 chrX 1531534 1531686 -20891141 + A-rich Low_complexity Low_complexity 2 150 0 1 596 220 238 0 45 chrX 1532892 1532958 -20889869 + (TTTCG)n Simple_repeat Simple_repeat 5 67 0 1 596 408 88 0 0 chrX 1534158 1534215 -20888612 + (TTTCG)n Simple_repeat Simple_repeat 1 57 0 1 596 208 196 0 35 chrX 1534293 1534351 -20888476 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 596 233 218 0 13 chrX 1534416 1534495 -20888332 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 596 227 284 0 0 chrX 1534644 1534711 -20888116 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 596 211 231 0 25 chrX 1535627 1535707 -20887120 + (CA)n Simple_repeat Simple_repeat 2 79 0 1 596 272 171 12 0 chrX 1535824 1535906 -20886921 + (CA)n Simple_repeat Simple_repeat 1 83 0 1 596 320 175 7 73 chrX 1535997 1536133 -20886694 + (CAAAC)n Simple_repeat Simple_repeat 2 128 0 1 596 314 61 20 0 chrX 1536509 1536558 -20886269 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 596 198 0 0 0 chrX 1536972 1536994 -20885833 + (CAA)n Simple_repeat Simple_repeat 1 22 0 1 596 180 135 0 0 chrX 1537046 1537083 -20885744 + (CAA)n Simple_repeat Simple_repeat 1 37 0 1 596 444 128 0 0 chrX 1537210 1537288 -20885539 + (CAG)n Simple_repeat Simple_repeat 1 78 0 1 596 204 267 0 0 chrX 1537835 1537895 -20884932 + C-rich Low_complexity Low_complexity 5 64 0 1 596 239 220 0 0 chrX 1537970 1538029 -20884798 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 596 320 238 0 0 chrX 1538261 1538324 -20884503 + (CCCCAA)n Simple_repeat Simple_repeat 2 64 0 1 596 255 79 0 0 chrX 1539506 1539544 -20883283 + (CCGAG)n Simple_repeat Simple_repeat 5 42 0 1 596 204 125 0 0 chrX 1539726 1539758 -20883069 + (CTCCG)n Simple_repeat Simple_repeat 4 35 0 1 596 221 246 0 0 chrX 1540119 1540184 -20882643 + A-rich Low_complexity Low_complexity 3 67 0 1 596 204 40 0 0 chrX 1540550 1540575 -20882252 + (CCGAA)n Simple_repeat Simple_repeat 1 25 0 1 596 189 147 0 0 chrX 1540691 1540725 -20882102 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1 596 216 213 0 16 chrX 1541086 1541148 -20881679 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 1 596 261 57 0 0 chrX 1541213 1541248 -20881579 + (CTA)n Simple_repeat Simple_repeat 3 37 0 1 596 293 47 0 23 chrX 1541279 1541323 -20881504 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 1 596 263 28 0 27 chrX 1541473 1541510 -20881317 + (CAA)n Simple_repeat Simple_repeat 1 36 0 1 596 210 150 0 0 chrX 1542797 1542837 -20879990 + (CGG)n Simple_repeat Simple_repeat 3 42 0 1 596 222 156 0 0 chrX 1543179 1543224 -20879603 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 596 316 127 0 53 chrX 1543225 1543300 -20879527 + GA-rich Low_complexity Low_complexity 3 73 0 1 596 291 71 0 0 chrX 1543623 1543665 -20879162 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 596 21 36 0 0 chrX 1544170 1544198 -20878629 + AT_rich Low_complexity Low_complexity 1 28 0 1 596 24 0 0 0 chrX 1547122 1547146 -20875681 + AT_rich Low_complexity Low_complexity 1 24 0 1 596 208 182 0 22 chrX 1547186 1547231 -20875596 + (CAAAC)n Simple_repeat Simple_repeat 2 45 0 1 596 282 73 0 0 chrX 1547973 1548014 -20874813 + (CAGTC)n Simple_repeat Simple_repeat 4 44 0 1 596 243 61 0 0 chrX 1549606 1549639 -20873188 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 596 195 189 0 0 chrX 1550608 1550661 -20872166 + CT-rich Low_complexity Low_complexity 2 54 0 1 596 218 254 0 0 chrX 1551726 1551785 -20871042 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 596 262 265 0 30 chrX 1553073 1553174 -20869653 + ROO_I LTR Pao 635 732 -7524 1 596 202 184 41 0 chrX 1554117 1554166 -20868661 + (CATA)n Simple_repeat Simple_repeat 4 54 0 1 596 189 219 0 0 chrX 1554257 1554330 -20868497 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 596 204 97 0 0 chrX 1555561 1555592 -20867235 + (A)n Simple_repeat Simple_repeat 1 31 0 1 596 207 191 0 0 chrX 1555831 1555878 -20866949 + A-rich Low_complexity Low_complexity 1 47 0 1 596 255 254 14 0 chrX 1556610 1556681 -20866146 + A-rich Low_complexity Low_complexity 5 76 0 1 596 24 0 0 0 chrX 1557951 1557975 -20864852 + AT_rich Low_complexity Low_complexity 1 24 0 1 596 204 97 0 0 chrX 1558126 1558157 -20864670 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1 596 24 67 0 0 chrX 1558349 1558394 -20864433 + AT_rich Low_complexity Low_complexity 1 45 0 1 596 26 0 0 0 chrX 1558833 1558859 -20863968 + AT_rich Low_complexity Low_complexity 1 26 0 1 596 21 36 0 0 chrX 1562442 1562470 -20860357 + AT_rich Low_complexity Low_complexity 1 28 0 1 596 22 56 0 0 chrX 1563459 1563495 -20859332 + AT_rich Low_complexity Low_complexity 1 36 0 1 596 21 57 0 0 chrX 1567168 1567203 -20855624 + AT_rich Low_complexity Low_complexity 1 35 0 1 596 206 111 21 43 chrX 1567347 1567394 -20855433 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 596 202 333 17 17 chrX 1570040 1570159 -20852668 + (CCG)n Simple_repeat Simple_repeat 3 121 0 1 596 387 113 0 0 chrX 1571177 1571239 -20851588 + (CTG)n Simple_repeat Simple_repeat 1 62 0 1 596 327 78 0 0 chrX 1571429 1571480 -20851347 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 597 641 47 12 0 chrX 1573667 1573752 -20849075 + (TTGG)n Simple_repeat Simple_repeat 2 87 0 1 597 232 198 0 71 chrX 1573961 1574059 -20848768 + T-rich Low_complexity Low_complexity 2 92 0 1 597 258 32 0 0 chrX 1574980 1575011 -20847816 + (CGGA)n Simple_repeat Simple_repeat 3 33 0 1 597 288 77 0 0 chrX 1579341 1579380 -20843447 + (GTTTG)n Simple_repeat Simple_repeat 3 41 0 1 597 201 152 0 0 chrX 1579472 1579505 -20843322 + (AACTG)n Simple_repeat Simple_repeat 4 36 0 1 597 288 211 0 0 chrX 1581858 1581934 -20840893 + (TTG)n Simple_repeat Simple_repeat 1 76 0 1 597 189 147 0 0 chrX 1591706 1591740 -20831087 + (AGTTG)n Simple_repeat Simple_repeat 1 34 0 1 597 234 91 0 0 chrX 1592519 1592552 -20830275 + (ACCG)n Simple_repeat Simple_repeat 1 33 0 1 597 180 0 0 0 chrX 1592829 1592849 -20829978 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 597 243 103 0 0 chrX 1594638 1594677 -20828150 + (CACCAT)n Simple_repeat Simple_repeat 4 42 0 1 597 1301 316 47 29 chrX 1597422 1598822 -20824005 + SAR_DM Satellite Satellite 1 1426 -241 1 597 237 239 0 0 chrX 1599912 1600029 -20822798 + (CA)n Simple_repeat Simple_repeat 1 117 0 1 597 243 61 0 0 chrX 1601719 1601752 -20821075 + (CAGGA)n Simple_repeat Simple_repeat 3 35 0 1 597 420 128 0 0 chrX 1602122 1602200 -20820627 + (GTCTG)n Simple_repeat Simple_repeat 2 79 0 1 597 321 68 0 0 chrX 1606325 1606369 -20816458 + (GAGTG)n Simple_repeat Simple_repeat 4 47 0 1 597 222 37 0 0 chrX 1606520 1606547 -20816280 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1 597 225 132 0 0 chrX 1607701 1607739 -20815088 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 1 597 197 86 0 54 chrX 1607926 1607963 -20814864 + (GAGTG)n Simple_repeat Simple_repeat 4 38 0 1 597 198 156 0 0 chrX 1608171 1608216 -20814611 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 597 246 32 0 0 chrX 1608818 1608849 -20813978 + (CTG)n Simple_repeat Simple_repeat 3 33 0 1 597 273 174 0 0 chrX 1609058 1609127 -20813700 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 597 222 37 0 0 chrX 1609796 1609823 -20813004 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 597 300 175 0 0 chrX 1609920 1609983 -20812844 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 1 597 270 56 0 0 chrX 1611492 1611528 -20811299 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 597 208 229 0 0 chrX 1613248 1613309 -20809518 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 1 597 246 208 0 0 chrX 1615514 1615567 -20807260 + (GAGTG)n Simple_repeat Simple_repeat 3 55 0 1 597 224 200 12 0 chrX 1616076 1616156 -20806671 + (GCTG)n Simple_repeat Simple_repeat 3 83 0 1 597 214 323 0 0 chrX 1617547 1617609 -20805218 + (CAAA)n Simple_repeat Simple_repeat 2 63 0 1 597 249 119 0 0 chrX 1618037 1618079 -20804748 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 597 225 0 0 0 chrX 1618111 1618136 -20804691 + (CAGT)n Simple_repeat Simple_repeat 4 28 0 1 597 201 132 0 0 chrX 1618369 1618407 -20804420 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 597 218 263 0 0 chrX 1618474 1618531 -20804296 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 597 213 182 0 0 chrX 1618620 1618675 -20804152 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 597 205 162 0 0 chrX 1620425 1620462 -20802365 + C-rich Low_complexity Low_complexity 1 37 0 1 597 230 89 0 43 chrX 1621177 1621224 -20801603 + (CACAC)n Simple_repeat Simple_repeat 1 45 0 1 597 186 128 0 0 chrX 1621772 1621811 -20801016 + (TTCTCC)n Simple_repeat Simple_repeat 1 39 0 1 597 249 139 0 0 chrX 1622934 1622977 -20799850 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 597 227 222 37 0 chrX 1623791 1623845 -20798982 + (CATCC)n Simple_repeat Simple_repeat 3 58 0 1 597 246 224 0 0 chrX 1624722 1624780 -20798047 + (CTG)n Simple_repeat Simple_repeat 2 59 0 1 597 223 150 33 0 chrX 1627902 1627962 -20794865 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 597 236 120 20 0 chrX 1628136 1628186 -20794641 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 597 255 31 0 0 chrX 1629333 1629365 -20793462 + (GGCTG)n Simple_repeat Simple_repeat 3 34 0 1 597 375 113 0 0 chrX 1629866 1629928 -20792899 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 597 218 311 0 0 chrX 1629961 1630089 -20792738 + T-rich Low_complexity Low_complexity 1 128 0 1 597 3819 0 0 0 chrX 1631198 1631626 -20791201 - ROO_LTR LTR Pao 0 428 1 1 597 71072 1 1 0 chrX 1631626 1639877 -20782950 - ROO_I LTR Pao 0 8256 1 1 597 3819 0 0 0 chrX 1639877 1640305 -20782522 - ROO_LTR LTR Pao 0 428 1 1 597 250 277 12 12 chrX 1643313 1643397 -20779430 + (CAGC)n Simple_repeat Simple_repeat 3 86 0 1 597 231 184 41 0 chrX 1645428 1645477 -20777350 + (CAGTT)n Simple_repeat Simple_repeat 1 51 0 1 597 21 0 0 0 chrX 1645576 1645597 -20777230 + AT_rich Low_complexity Low_complexity 1 21 0 1 597 218 173 58 0 chrX 1647011 1647063 -20775764 + (CGGGA)n Simple_repeat Simple_repeat 5 59 0 1 597 228 222 0 0 chrX 1648189 1648234 -20774593 + (TTCGGG)n Simple_repeat Simple_repeat 2 46 0 1 597 186 71 0 0 chrX 1649403 1649431 -20773396 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 597 195 100 0 0 chrX 1650583 1650613 -20772214 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 597 282 132 0 0 chrX 1651515 1651568 -20771259 + (ACTG)n Simple_repeat Simple_repeat 3 55 0 1 597 225 0 0 0 chrX 1653826 1653851 -20768976 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 597 23 0 0 0 chrX 1657129 1657152 -20765675 + AT_rich Low_complexity Low_complexity 1 23 0 1 597 243 88 0 0 chrX 1658126 1658160 -20764667 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 597 221 167 0 23 chrX 1659063 1659106 -20763721 + (CACTC)n Simple_repeat Simple_repeat 5 46 0 1 597 231 114 0 0 chrX 1659793 1659828 -20762999 + (TTCTG)n Simple_repeat Simple_repeat 4 38 0 1 597 207 88 0 0 chrX 1659904 1659938 -20762889 + (CAGAG)n Simple_repeat Simple_repeat 5 38 0 1 597 258 32 0 0 chrX 1660398 1660429 -20762398 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 597 239 54 27 0 chrX 1662358 1662395 -20760432 + (CTATA)n Simple_repeat Simple_repeat 5 42 0 1 597 192 97 0 0 chrX 1663730 1663761 -20759066 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 597 26 50 0 0 chrX 1663846 1663886 -20758941 + AT_rich Low_complexity Low_complexity 1 40 0 1 597 213 39 0 0 chrX 1668312 1668338 -20754489 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 597 235 242 15 29 chrX 1668615 1668683 -20754144 + GA-rich Low_complexity Low_complexity 4 70 0 1 597 497 111 22 0 chrX 1669299 1669389 -20753438 + (TAGA)n Simple_repeat Simple_repeat 3 94 0 1 597 36 0 0 0 chrX 1673431 1673467 -20749360 + AT_rich Low_complexity Low_complexity 1 36 0 1 597 252 122 0 0 chrX 1673788 1673829 -20748998 + (T)n Simple_repeat Simple_repeat 1 41 0 1 597 23 0 0 0 chrX 1678417 1678440 -20744387 + AT_rich Low_complexity Low_complexity 1 23 0 1 597 219 290 37 9 chrX 1686841 1686949 -20735878 + (TTGG)n Simple_repeat Simple_repeat 4 114 0 1 597 324 120 0 0 chrX 1686950 1687000 -20735827 + (ACTG)n Simple_repeat Simple_repeat 1 50 0 1 597 198 71 0 0 chrX 1687985 1688013 -20734814 + (CGATG)n Simple_repeat Simple_repeat 5 32 0 1 597 261 83 0 0 chrX 1688141 1688177 -20734650 + (GTGTG)n Simple_repeat Simple_repeat 2 37 0 1 597 270 0 0 0 chrX 1688388 1688418 -20734409 + (TCG)n Simple_repeat Simple_repeat 1 30 0 1 597 207 100 0 0 chrX 1690563 1690593 -20732234 + (TCGTG)n Simple_repeat Simple_repeat 3 32 0 1 597 206 118 0 0 chrX 1691111 1691145 -20731682 + (TAA)n Simple_repeat Simple_repeat 2 35 0 1 597 215 216 20 0 chrX 1692416 1692467 -20730360 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 597 219 69 0 0 chrX 1698187 1698216 -20724611 + (GGCTG)n Simple_repeat Simple_repeat 3 31 0 1 597 230 243 0 14 chrX 1698978 1699049 -20723778 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 597 265 321 0 0 chrX 1699127 1699239 -20723588 + (CAG)n Simple_repeat Simple_repeat 3 114 0 1 597 180 0 0 0 chrX 1700168 1700188 -20722639 + (CAGAA)n Simple_repeat Simple_repeat 5 24 0 1 597 223 204 0 18 chrX 1700818 1700873 -20721954 + (GGATG)n Simple_repeat Simple_repeat 2 55 0 1 598 208 220 0 0 chrX 1704821 1704871 -20717956 + CT-rich Low_complexity Low_complexity 3 52 0 1 598 233 317 32 78 chrX 1706003 1706157 -20716670 - XDMR Unknown Unknown -203 158 12 1 598 1509 249 110 55 chrX 1706056 1706839 -20715988 + SAR_DM Satellite Satellite 252 1077 -395 1 598 262 274 0 0 chrX 1707090 1707163 -20715664 + (TTG)n Simple_repeat Simple_repeat 3 75 0 1 598 211 71 48 0 chrX 1707633 1707675 -20715152 + (TCCTG)n Simple_repeat Simple_repeat 3 46 0 1 598 286 58 27 55 chrX 1712562 1712635 -20710192 + (TATAA)n Simple_repeat Simple_repeat 2 72 0 1 598 1849 96 89 17 chrX 1712667 1713058 -20709769 + DNAREP1_DM LINE Penelope 71 577 -17 1 598 246 127 28 14 chrX 1713698 1713770 -20709057 + (CAT)n Simple_repeat Simple_repeat 1 73 0 1 598 1279 119 81 12 chrX 1714664 1714986 -20707841 - DNAREP1_DM LINE Penelope -166 428 45 1 598 205 152 0 0 chrX 1715626 1715659 -20707168 + CT-rich Low_complexity Low_complexity 1 33 0 1 598 242 213 53 0 chrX 1719770 1719864 -20702963 + ROO_I LTR Pao 640 738 -7518 1 598 245 98 24 0 chrX 1720530 1720571 -20702256 + (CAT)n Simple_repeat Simple_repeat 1 42 0 1 598 201 196 0 0 chrX 1720792 1720843 -20701984 + T-rich Low_complexity Low_complexity 2 52 0 1 598 253 191 0 0 chrX 1721243 1721285 -20701542 - DNAREP1_DM LINE Penelope -529 65 24 1 598 225 250 0 45 chrX 1727292 1727359 -20695468 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1 598 210 217 0 21 chrX 1728965 1729012 -20693815 + T-rich Low_complexity Low_complexity 1 46 0 1 598 21 71 0 0 chrX 1730833 1730875 -20691952 + AT_rich Low_complexity Low_complexity 1 42 0 1 598 243 0 0 0 chrX 1732043 1732070 -20690757 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1 598 189 0 0 0 chrX 1732914 1732935 -20689892 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 598 21 0 0 0 chrX 1733743 1733764 -20689063 + AT_rich Low_complexity Low_complexity 1 21 0 1 598 231 177 0 31 chrX 1734462 1734526 -20688301 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 1 598 183 114 0 0 chrX 1735956 1735991 -20686836 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 598 231 272 0 36 chrX 1737743 1737827 -20685000 + (CAA)n Simple_repeat Simple_repeat 1 81 0 1 598 215 157 0 19 chrX 1737937 1737989 -20684838 + (CAA)n Simple_repeat Simple_repeat 3 53 0 1 598 208 259 0 0 chrX 1740709 1740763 -20682064 + (CAATC)n Simple_repeat Simple_repeat 4 57 0 1 598 270 81 0 0 chrX 1744277 1744314 -20678513 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 598 258 315 23 18 chrX 1744930 1745101 -20677726 + (CAG)n Simple_repeat Simple_repeat 1 172 0 1 598 1133 291 42 35 chrX 1749847 1750546 -20672281 - SAR_DM Satellite Satellite -547 703 1 1 598 30 0 0 0 chrX 1771216 1771246 -20651581 + AT_rich Low_complexity Low_complexity 1 30 0 1 598 363 23 0 0 chrX 1775983 1776027 -20646800 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 598 222 136 0 0 chrX 1780914 1780958 -20641869 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 598 243 229 0 0 chrX 1782464 1782525 -20640302 + (CTG)n Simple_repeat Simple_repeat 3 63 0 1 598 212 342 0 0 chrX 1786017 1786096 -20636731 + (CCG)n Simple_repeat Simple_repeat 2 80 0 1 598 32 81 0 0 chrX 1796076 1796150 -20626677 + AT_rich Low_complexity Low_complexity 1 74 0 1 598 24 53 0 0 chrX 1802808 1802846 -20619981 + AT_rich Low_complexity Low_complexity 1 38 0 1 598 204 266 0 12 chrX 1809457 1809537 -20613290 + GA-rich Low_complexity Low_complexity 1 79 0 1 598 316 113 0 46 chrX 1810069 1810134 -20612693 + (TTA)n Simple_repeat Simple_repeat 2 63 0 1 598 186 43 0 0 chrX 1810493 1810516 -20612311 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 1 598 204 111 0 0 chrX 1811195 1811231 -20611596 + (GGA)n Simple_repeat Simple_repeat 2 37 0 1 598 341 242 47 63 chrX 1814246 1814436 -20608391 - SAR_DM Satellite Satellite -343 1129 943 1 598 451 258 72 7 chrX 1814306 1814474 -20608353 + XDMR_DM Unknown Unknown 1 177 -184 1 598 22 56 0 0 chrX 1824534 1824570 -20598257 + AT_rich Low_complexity Low_complexity 1 36 0 1 598 4592 2 2 0 chrX 1824624 1825141 -20597686 - NOMAD_LTR LTR Gypsy 0 518 1 1 598 50290 1 14 0 chrX 1825141 1831621 -20591206 - NOMAD_I LTR Gypsy 0 6572 1 1 598 4592 2 2 0 chrX 1831621 1832138 -20590689 - NOMAD_LTR LTR Gypsy 0 518 1 1 598 219 226 0 0 chrX 1833777 1833830 -20588997 + CT-rich Low_complexity Low_complexity 1 53 0 1 599 255 125 0 0 chrX 1836330 1836370 -20586457 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 599 195 42 0 0 chrX 1836581 1836605 -20586222 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1 599 258 32 0 0 chrX 1836679 1836710 -20586117 + (A)n Simple_repeat Simple_repeat 1 31 0 1 599 306 50 0 0 chrX 1838033 1838073 -20584754 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 599 215 226 0 19 chrX 1839213 1839267 -20583560 + (TTTCG)n Simple_repeat Simple_repeat 1 53 0 1 599 225 0 0 0 chrX 1840263 1840288 -20582539 + (CAATC)n Simple_repeat Simple_repeat 3 27 0 1 599 202 281 0 0 chrX 1841346 1841403 -20581424 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 599 269 250 15 0 chrX 1841495 1841563 -20581264 + A-rich Low_complexity Low_complexity 3 71 0 1 599 255 31 0 0 chrX 1841958 1841990 -20580837 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 599 203 245 0 0 chrX 1842033 1842086 -20580741 + (CAA)n Simple_repeat Simple_repeat 2 54 0 1 599 192 158 0 0 chrX 1843555 1843593 -20579234 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 599 230 282 0 13 chrX 1844493 1844572 -20578255 + CT-rich Low_complexity Low_complexity 4 81 0 1 599 189 0 0 0 chrX 1845241 1845262 -20577565 + (CACAG)n Simple_repeat Simple_repeat 4 24 0 1 599 201 147 0 0 chrX 1845731 1845765 -20577062 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 599 236 250 0 0 chrX 1846985 1847037 -20575790 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 599 3826 5 0 0 chrX 1848973 1849397 -20573430 - Stalker2_LTR LTR Gypsy 0 424 1 1 599 40625 19 6 3 chrX 1849397 1854645 -20568182 - Stalker2_I LTR Gypsy 0 6530 1574 1 599 14001 4 3 1 chrX 1854844 1856432 -20566395 - Stalker2_I LTR Gypsy -5810 1592 1 1 599 3826 5 0 0 chrX 1856432 1856856 -20565971 - Stalker2_LTR LTR Gypsy 0 424 1 1 599 264 30 0 0 chrX 1859026 1859059 -20563768 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 599 207 175 0 0 chrX 1860343 1860383 -20562444 + CT-rich Low_complexity Low_complexity 2 41 0 1 599 228 111 0 0 chrX 1860489 1860525 -20562302 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 599 204 40 0 0 chrX 1860663 1860688 -20562139 + (CGGGG)n Simple_repeat Simple_repeat 3 27 0 1 599 212 149 21 0 chrX 1861181 1861228 -20561599 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 599 277 264 11 0 chrX 1864906 1864993 -20557834 + CT-rich Low_complexity Low_complexity 2 89 0 1 599 219 36 0 0 chrX 1865088 1865116 -20557711 + (A)n Simple_repeat Simple_repeat 1 28 0 1 599 217 288 0 0 chrX 1867537 1867596 -20555231 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 599 201 39 0 0 chrX 1867770 1867796 -20555031 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 599 195 42 0 0 chrX 1867908 1867932 -20554895 + (CAATG)n Simple_repeat Simple_repeat 5 28 0 1 599 186 43 0 0 chrX 1869223 1869246 -20553581 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 599 212 263 0 38 chrX 1870018 1870097 -20552730 + GA-rich Low_complexity Low_complexity 2 77 0 1 599 221 128 0 21 chrX 1870193 1870241 -20552586 + (TTG)n Simple_repeat Simple_repeat 2 48 0 1 599 203 175 0 24 chrX 1871163 1871204 -20551623 + (TTTCG)n Simple_repeat Simple_repeat 3 42 0 1 599 23 0 0 0 chrX 1871717 1871740 -20551087 + AT_rich Low_complexity Low_complexity 1 23 0 1 599 207 283 17 0 chrX 1874861 1874921 -20547906 + (CAA)n Simple_repeat Simple_repeat 3 63 0 1 599 191 88 0 29 chrX 1875035 1875070 -20547757 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 599 216 135 0 0 chrX 1876264 1876301 -20546526 + (CTG)n Simple_repeat Simple_repeat 3 39 0 1 599 206 233 0 0 chrX 1876395 1876438 -20546389 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1 599 189 0 0 0 chrX 1877216 1877237 -20545590 + (GCCTG)n Simple_repeat Simple_repeat 3 23 0 1 599 316 239 0 15 chrX 1877275 1877343 -20545484 + (TCTCTG)n Simple_repeat Simple_repeat 1 67 0 1 599 21 0 0 0 chrX 1877816 1877837 -20544990 + AT_rich Low_complexity Low_complexity 1 21 0 1 599 201 154 0 0 chrX 1879896 1879935 -20542892 + (CGAA)n Simple_repeat Simple_repeat 2 40 0 1 599 207 114 0 0 chrX 1880298 1880333 -20542494 + (TTAGGG)n Simple_repeat Simple_repeat 2 36 0 1 599 205 261 15 0 chrX 1881269 1881334 -20541493 + CT-rich Low_complexity Low_complexity 1 66 0 1 599 259 222 0 0 chrX 1881386 1881440 -20541387 + (TTG)n Simple_repeat Simple_repeat 2 55 0 1 599 303 195 272 16 chrX 1882335 1882460 -20540367 - DNAREP1_DM LINE Penelope -10 584 428 1 599 189 74 0 0 chrX 1882721 1882748 -20540079 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 599 236 241 0 17 chrX 1883105 1883164 -20539663 + T-rich Low_complexity Low_complexity 4 61 0 1 599 24 0 0 0 chrX 1883987 1884011 -20538816 + AT_rich Low_complexity Low_complexity 1 24 0 1 599 180 0 0 0 chrX 1884080 1884100 -20538727 + (CTCG)n Simple_repeat Simple_repeat 2 21 0 1 599 189 0 0 0 chrX 1884301 1884322 -20538505 + (CAG)n Simple_repeat Simple_repeat 3 23 0 1 599 221 216 0 0 chrX 1884347 1884384 -20538443 + (CCG)n Simple_repeat Simple_repeat 1 37 0 1 599 231 146 0 0 chrX 1884496 1884537 -20538290 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 599 201 74 0 0 chrX 1885888 1885915 -20536912 + (GGGAGA)n Simple_repeat Simple_repeat 6 32 0 1 599 275 224 0 0 chrX 1885993 1886060 -20536767 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 599 186 103 0 0 chrX 1886150 1886179 -20536648 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 599 305 132 21 42 chrX 1886406 1886501 -20536326 + A-rich Low_complexity Low_complexity 4 96 0 1 599 197 146 21 0 chrX 1886831 1886879 -20535948 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 599 246 258 0 21 chrX 1887614 1887709 -20535118 + ROO_I LTR Pao 646 738 -7518 1 599 250 100 0 57 chrX 1887787 1887840 -20534987 + (CACCAT)n Simple_repeat Simple_repeat 5 54 0 1 599 227 311 0 0 chrX 1888034 1888140 -20534687 + ROO_I LTR Pao 638 743 -7513 1 599 186 43 0 0 chrX 1888140 1888163 -20534664 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 599 234 0 0 0 chrX 1888376 1888402 -20534425 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 599 207 311 0 29 chrX 1888677 1888813 -20534014 + A-rich Low_complexity Low_complexity 5 136 0 1 599 198 71 0 0 chrX 1888817 1888845 -20533982 + (CAA)n Simple_repeat Simple_repeat 1 28 0 1 599 210 37 0 0 chrX 1889015 1889042 -20533785 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 599 22 0 0 0 chrX 1889244 1889266 -20533561 + AT_rich Low_complexity Low_complexity 1 22 0 1 599 227 200 0 0 chrX 1889644 1889689 -20533138 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 599 195 129 0 0 chrX 1889896 1889927 -20532900 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 599 202 216 0 0 chrX 1890325 1890362 -20532465 + (CATA)n Simple_repeat Simple_repeat 3 39 0 1 599 21 0 0 0 chrX 1890532 1890553 -20532274 + AT_rich Low_complexity Low_complexity 1 21 0 1 599 26 0 0 0 chrX 1891426 1891452 -20531375 + AT_rich Low_complexity Low_complexity 1 26 0 1 599 281 225 0 0 chrX 1892054 1892125 -20530702 + CT-rich Low_complexity Low_complexity 2 72 0 1 599 209 274 0 16 chrX 1892164 1892227 -20530600 + (CAG)n Simple_repeat Simple_repeat 1 62 0 1 599 180 152 0 0 chrX 1892698 1892731 -20530096 + (CAG)n Simple_repeat Simple_repeat 2 34 0 1 599 214 306 0 0 chrX 1892817 1892902 -20529925 + GA-rich Low_complexity Low_complexity 4 88 0 1 599 243 161 0 0 chrX 1893134 1893190 -20529637 + (CAG)n Simple_repeat Simple_repeat 1 56 0 1 599 298 172 0 33 chrX 1893280 1893370 -20529457 + ROO_I LTR Pao 652 738 -7518 1 599 245 282 17 8 chrX 1893302 1893420 -20529407 + TART_B1 LINE telomeric 122 240 -10414 1 599 402 216 0 0 chrX 1893845 1893970 -20528857 + (CAG)n Simple_repeat Simple_repeat 1 125 0 1 599 312 186 9 64 chrX 1894899 1895008 -20527819 + ROO_I LTR Pao 642 744 -7512 1 599 322 167 12 12 chrX 1895107 1895192 -20527635 + (CAG)n Simple_repeat Simple_repeat 3 87 0 1 599 294 95 0 0 chrX 1895291 1895333 -20527494 + (CAG)n Simple_repeat Simple_repeat 1 42 0 1 599 192 40 0 0 chrX 1895362 1895387 -20527440 + (CAG)n Simple_repeat Simple_repeat 3 27 0 1 599 251 164 18 18 chrX 1896649 1896705 -20526122 + (CAG)n Simple_repeat Simple_repeat 2 57 0 1 599 280 256 12 12 chrX 1896963 1897046 -20525781 + (CAG)n Simple_repeat Simple_repeat 2 84 0 1 599 315 130 0 0 chrX 1897074 1897128 -20525699 + (CAA)n Simple_repeat Simple_repeat 1 54 0 1 599 402 57 0 0 chrX 1897314 1897367 -20525460 + (CAG)n Simple_repeat Simple_repeat 1 53 0 1 599 278 319 0 16 chrX 1897824 1897893 -20524934 + (CAG)n Simple_repeat Simple_repeat 1 69 0 1 599 333 47 0 0 chrX 1897893 1897936 -20524891 + (CAT)n Simple_repeat Simple_repeat 1 43 0 1 599 278 319 0 16 chrX 1897936 1897987 -20524840 + (CAG)n Simple_repeat Simple_repeat 1 49 0 1 599 258 312 18 9 chrX 1898001 1898114 -20524713 + (CAA)n Simple_repeat Simple_repeat 1 114 0 1 599 400 160 20 0 chrX 1898137 1898237 -20524590 + (CAA)n Simple_repeat Simple_repeat 2 103 0 1 599 265 305 8 0 chrX 1898262 1898393 -20524434 + C-rich Low_complexity Low_complexity 4 135 0 1 599 273 239 0 61 chrX 1898485 1898632 -20524195 + (TTA)n Simple_repeat Simple_repeat 1 138 0 1 599 270 56 0 0 chrX 1898765 1898801 -20524026 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 599 228 64 0 60 chrX 1899511 1899561 -20523266 + (GAAA)n Simple_repeat Simple_repeat 3 49 0 1 599 203 79 0 26 chrX 1900668 1900707 -20522120 + (TTCCC)n Simple_repeat Simple_repeat 1 38 0 1 599 23 0 0 0 chrX 1903428 1903451 -20519376 + AT_rich Low_complexity Low_complexity 1 23 0 1 599 24 32 0 0 chrX 1905854 1905885 -20516942 + AT_rich Low_complexity Low_complexity 1 31 0 1 599 26 0 0 0 chrX 1906393 1906419 -20516408 + AT_rich Low_complexity Low_complexity 1 26 0 1 599 204 229 16 16 chrX 1906446 1906508 -20516319 + GA-rich Low_complexity Low_complexity 1 62 0 1 599 228 266 0 25 chrX 1906689 1906770 -20516057 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 599 248 222 0 16 chrX 1907472 1907575 -20515252 + CT-rich Low_complexity Low_complexity 1 101 0 1 599 245 295 6 25 chrX 1915883 1916043 -20506784 + (CAG)n Simple_repeat Simple_repeat 2 158 0 1 599 22 0 0 0 chrX 1916959 1916981 -20505846 + AT_rich Low_complexity Low_complexity 1 22 0 1 599 213 204 0 0 chrX 1917072 1917121 -20505706 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 599 276 158 0 0 chrX 1917780 1917837 -20504990 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 599 220 200 0 0 chrX 1918957 1919007 -20503820 + CT-rich Low_complexity Low_complexity 2 51 0 1 599 200 59 0 105 chrX 1919472 1919510 -20503317 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1 599 195 129 0 0 chrX 1923651 1923682 -20499145 + (CAG)n Simple_repeat Simple_repeat 2 32 0 1 599 205 176 0 0 chrX 1925454 1925488 -20497339 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 599 200 86 29 0 chrX 1928037 1928072 -20494755 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 1 599 250 222 0 0 chrX 1929186 1929240 -20493587 + (CTG)n Simple_repeat Simple_repeat 1 54 0 1 599 195 129 0 0 chrX 1929471 1929502 -20493325 + (ATTG)n Simple_repeat Simple_repeat 3 33 0 1 599 211 135 27 0 chrX 1930146 1930183 -20492644 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 599 210 118 0 0 chrX 1930322 1930356 -20492471 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 599 215 265 0 0 chrX 1930526 1930575 -20492252 + (CCG)n Simple_repeat Simple_repeat 3 51 0 1 599 25 51 0 0 chrX 1933244 1933283 -20489544 + AT_rich Low_complexity Low_complexity 1 39 0 1 599 280 212 0 0 chrX 1937248 1937314 -20485513 - ROO_I LTR Pao -7526 730 665 1 599 226 243 13 13 chrX 1943535 1943610 -20479217 + CT-rich Low_complexity Low_complexity 1 75 0 1 599 204 97 0 0 chrX 1945892 1945923 -20476904 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 599 231 191 0 0 chrX 1950500 1950542 -20472285 + (TGG)n Simple_repeat Simple_repeat 3 44 0 1 599 22 0 0 0 chrX 1953960 1953982 -20468845 + AT_rich Low_complexity Low_complexity 1 22 0 1 599 207 262 0 0 chrX 1955441 1955502 -20467325 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 599 215 214 0 0 chrX 1958749 1958791 -20464036 + (TGG)n Simple_repeat Simple_repeat 3 44 0 1 600 235 329 0 0 chrX 1972575 1972651 -20450176 + (CCG)n Simple_repeat Simple_repeat 1 76 0 1 600 3607 74 2 4 chrX 1976684 1977199 -20445628 - Transib-N1_DM DNA Transib 0 514 1 1 600 208 171 0 24 chrX 1981086 1981128 -20441699 + T-rich Low_complexity Low_complexity 3 43 0 1 600 197 83 28 0 chrX 1981531 1981567 -20441260 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 1 600 195 162 0 0 chrX 1986397 1986434 -20436393 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 600 212 239 0 0 chrX 1987113 1987159 -20435668 + (ATG)n Simple_repeat Simple_repeat 2 47 0 1 600 264 200 0 0 chrX 1988483 1988558 -20434269 + (CA)n Simple_repeat Simple_repeat 1 75 0 1 600 219 270 0 26 chrX 1990518 1990594 -20432233 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 600 21 0 0 0 chrX 1994069 1994090 -20428737 + AT_rich Low_complexity Low_complexity 1 21 0 1 600 254 241 0 0 chrX 1995552 1995606 -20427221 + (CCCA)n Simple_repeat Simple_repeat 1 54 0 1 600 222 89 67 0 chrX 1997044 1997089 -20425738 + A-rich Low_complexity Low_complexity 3 50 0 1 600 210 118 0 0 chrX 1997261 1997295 -20425532 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1 600 204 222 0 60 chrX 2000743 2000810 -20422017 + (CGAG)n Simple_repeat Simple_repeat 2 64 0 1 600 236 234 0 0 chrX 2002142 2002189 -20420638 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 600 186 103 0 0 chrX 2002272 2002301 -20420526 + (CAGT)n Simple_repeat Simple_repeat 4 32 0 1 600 240 276 30 30 chrX 2005440 2005541 -20417286 + ROO_I LTR Pao 643 743 -7513 1 600 22 0 0 0 chrX 2006017 2006039 -20416788 + AT_rich Low_complexity Low_complexity 1 22 0 1 600 249 176 0 0 chrX 2006867 2006941 -20415886 + (CAGAA)n Simple_repeat Simple_repeat 1 74 0 1 600 216 111 0 0 chrX 2007251 2007287 -20415540 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 600 25 0 0 0 chrX 2007394 2007419 -20415408 + AT_rich Low_complexity Low_complexity 1 25 0 1 600 195 69 0 0 chrX 2008530 2008559 -20414268 + (A)n Simple_repeat Simple_repeat 1 29 0 1 600 186 43 0 0 chrX 2012561 2012584 -20410243 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 600 203 133 0 0 chrX 2012896 2012926 -20409901 + (CTG)n Simple_repeat Simple_repeat 1 30 0 1 600 289 326 0 0 chrX 2012974 2013109 -20409718 + (CTG)n Simple_repeat Simple_repeat 1 135 0 1 600 329 209 13 92 chrX 2013200 2013353 -20409474 + (CTG)n Simple_repeat Simple_repeat 3 143 0 1 600 209 218 18 18 chrX 2013866 2013922 -20408905 + (CTG)n Simple_repeat Simple_repeat 3 58 0 1 600 186 43 0 0 chrX 2013942 2013965 -20408862 + (CTG)n Simple_repeat Simple_repeat 2 24 0 1 600 238 115 0 90 chrX 2014527 2014594 -20408233 + (CTG)n Simple_repeat Simple_repeat 1 61 0 1 600 23 0 0 0 chrX 2017170 2017193 -20405634 + AT_rich Low_complexity Low_complexity 1 23 0 1 600 221 38 35 70 chrX 2018193 2018250 -20404577 + (TTA)n Simple_repeat Simple_repeat 1 55 0 1 600 28 0 0 0 chrX 2018284 2018312 -20404515 + AT_rich Low_complexity Low_complexity 1 28 0 1 600 204 67 0 0 chrX 2018694 2018724 -20404103 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1 600 289 326 0 0 chrX 2022887 2023022 -20399805 + (CTG)n Simple_repeat Simple_repeat 1 135 0 1 600 329 209 13 92 chrX 2023113 2023266 -20399561 + (CTG)n Simple_repeat Simple_repeat 3 143 0 1 600 218 224 14 29 chrX 2023769 2023838 -20398989 + (CTG)n Simple_repeat Simple_repeat 3 70 0 1 600 186 43 0 0 chrX 2023858 2023881 -20398946 + (CTG)n Simple_repeat Simple_repeat 2 24 0 1 600 254 105 17 50 chrX 2024445 2024505 -20398322 - Gypsy11_I LTR Gypsy -2945 579 522 1 600 24 32 0 0 chrX 2026080 2026111 -20396716 + AT_rich Low_complexity Low_complexity 1 31 0 1 600 4785 7 3 7 chrX 2026137 2026726 -20396101 - FB4_DM DNA Tc1 0 4089 3503 1 600 6891 19 3 14 chrX 2026684 2027583 -20395244 + FB4_DM DNA Tc1 3201 4089 0 1 600 183 42 0 0 chrX 2027601 2027625 -20395202 + (T)n Simple_repeat Simple_repeat 1 24 0 1 600 24 32 0 0 chrX 2030089 2030120 -20392707 + AT_rich Low_complexity Low_complexity 1 31 0 1 600 231 88 0 0 chrX 2030413 2030447 -20392380 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 600 183 129 0 0 chrX 2036591 2036622 -20386205 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 600 213 39 0 0 chrX 2037163 2037189 -20385638 + (CCA)n Simple_repeat Simple_repeat 1 26 0 1 600 21 57 0 0 chrX 2043019 2043054 -20379773 + AT_rich Low_complexity Low_complexity 1 35 0 1 600 222 105 0 0 chrX 2044695 2044733 -20378094 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 600 288 91 0 0 chrX 2049442 2049486 -20373341 + (TCC)n Simple_repeat Simple_repeat 2 45 0 1 600 210 254 0 15 chrX 2052718 2052786 -20370041 + (CAA)n Simple_repeat Simple_repeat 2 68 0 1 600 22 35 0 0 chrX 2057023 2057052 -20365775 + AT_rich Low_complexity Low_complexity 1 29 0 1 600 217 122 0 47 chrX 2058563 2058606 -20364221 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1 600 213 175 0 0 chrX 2061675 2061715 -20361112 + T-rich Low_complexity Low_complexity 6 45 0 1 600 416 67 0 16 chrX 2063040 2063101 -20359726 + (TCCG)n Simple_repeat Simple_repeat 4 63 0 1 600 21 57 0 0 chrX 2066140 2066175 -20356652 + AT_rich Low_complexity Low_complexity 1 35 0 1 600 186 43 0 0 chrX 2080768 2080791 -20342036 + (CTG)n Simple_repeat Simple_repeat 3 25 0 1 600 201 188 0 20 chrX 2082127 2082176 -20340651 + (TTCGGG)n Simple_repeat Simple_repeat 6 53 0 1 600 381 269 15 15 chrX 2085179 2085315 -20337512 - XDMR_DM Unknown Unknown -222 138 3 1 600 621 297 32 27 chrX 2085199 2085611 -20337216 + SAR_DM Satellite Satellite 566 979 -493 1 600 32 0 0 0 chrX 2089654 2089686 -20333141 + AT_rich Low_complexity Low_complexity 1 32 0 1 600 244 264 0 0 chrX 2090402 2090455 -20332372 + T-rich Low_complexity Low_complexity 5 57 0 1 601 233 202 38 0 chrX 2102642 2102721 -20320106 + ROO_I LTR Pao 653 734 -7522 1 601 216 235 20 0 chrX 2103264 2103315 -20319512 + (TTG)n Simple_repeat Simple_repeat 1 52 0 1 601 207 226 32 0 chrX 2103546 2103608 -20319219 + (CACCAT)n Simple_repeat Simple_repeat 4 67 0 1 601 1217 314 37 41 chrX 2104423 2105727 -20317100 + SAR_DM Satellite Satellite 1 1299 -292 1 601 206 146 24 0 chrX 2115889 2115930 -20306897 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 601 216 211 0 0 chrX 2118476 2118552 -20304275 + (CCA)n Simple_repeat Simple_repeat 2 77 0 1 601 23 54 0 0 chrX 2119042 2119079 -20303748 + AT_rich Low_complexity Low_complexity 1 37 0 1 601 221 227 0 0 chrX 2121442 2121486 -20301341 + (CCA)n Simple_repeat Simple_repeat 2 45 0 1 601 198 0 0 0 chrX 2130844 2130866 -20291961 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 601 46 54 0 0 chrX 2131990 2132064 -20290763 + AT_rich Low_complexity Low_complexity 1 74 0 1 601 231 215 0 106 chrX 2136386 2136490 -20286337 + ROO_I LTR Pao 641 733 -7523 1 601 269 145 0 16 chrX 2138961 2139024 -20283803 + (CGTAA)n Simple_repeat Simple_repeat 3 64 0 1 601 231 125 0 0 chrX 2139113 2139153 -20283674 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 601 240 161 46 46 chrX 2148606 2148671 -20274156 + (TATATG)n Simple_repeat Simple_repeat 1 65 0 1 601 465 168 0 0 chrX 2149242 2149349 -20273478 + CT-rich Low_complexity Low_complexity 2 108 0 1 601 195 203 0 0 chrX 2151994 2152053 -20270774 + (TGG)n Simple_repeat Simple_repeat 1 59 0 1 601 198 194 0 0 chrX 2159085 2159147 -20263680 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 601 22 35 0 0 chrX 2163776 2163805 -20259022 + AT_rich Low_complexity Low_complexity 1 29 0 1 601 180 111 0 0 chrX 2165682 2165709 -20257118 + (TTCTCC)n Simple_repeat Simple_repeat 2 28 0 1 601 198 103 0 0 chrX 2171976 2172005 -20250822 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1 601 311 96 0 19 chrX 2172302 2172355 -20250472 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 601 324 70 0 0 chrX 2172473 2172516 -20250311 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 601 21 36 0 0 chrX 2173435 2173463 -20249364 + AT_rich Low_complexity Low_complexity 1 28 0 1 601 188 67 33 0 chrX 2173535 2173565 -20249262 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1 601 189 0 0 0 chrX 2173711 2173732 -20249095 + (CATAT)n Simple_repeat Simple_repeat 4 24 0 1 601 198 71 0 0 chrX 2174364 2174392 -20248435 + (CATTT)n Simple_repeat Simple_repeat 4 31 0 1 601 216 0 0 0 chrX 2174913 2174937 -20247890 + (T)n Simple_repeat Simple_repeat 1 24 0 1 601 203 184 0 0 chrX 2175335 2175373 -20247454 + T-rich Low_complexity Low_complexity 1 38 0 1 601 197 54 0 75 chrX 2175797 2175837 -20246990 + (ATGGTG)n Simple_repeat Simple_repeat 2 38 0 1 601 220 159 0 43 chrX 2176806 2176852 -20245975 + (CACCC)n Simple_repeat Simple_repeat 4 47 0 1 601 234 81 0 0 chrX 2177651 2177688 -20245139 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 601 204 40 0 0 chrX 2177732 2177757 -20245070 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 601 273 75 0 0 chrX 2178937 2178977 -20243850 + (T)n Simple_repeat Simple_repeat 1 40 0 1 601 305 256 0 11 chrX 2181622 2181709 -20241118 + (TTG)n Simple_repeat Simple_repeat 3 88 0 1 601 228 67 0 0 chrX 2181792 2181822 -20241005 + (CAG)n Simple_repeat Simple_repeat 3 32 0 1 601 188 88 0 56 chrX 2182991 2183027 -20239800 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1 601 240 170 0 0 chrX 2183275 2183328 -20239499 + (TTG)n Simple_repeat Simple_repeat 1 53 0 1 601 22 0 0 0 chrX 2183496 2183518 -20239309 + AT_rich Low_complexity Low_complexity 1 22 0 1 601 201 74 0 0 chrX 2183558 2183585 -20239242 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 601 21 36 0 0 chrX 2183921 2183949 -20238878 + AT_rich Low_complexity Low_complexity 1 28 0 1 601 281 93 0 18 chrX 2184242 2184297 -20238530 + (CTTTG)n Simple_repeat Simple_repeat 1 54 0 1 601 234 128 0 0 chrX 2184551 2184590 -20238237 + (CAGA)n Simple_repeat Simple_repeat 1 39 0 1 601 200 149 0 21 chrX 2185122 2185170 -20237657 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 601 241 238 0 0 chrX 2186626 2186689 -20236138 - ROO_I LTR Pao -7537 719 657 1 601 203 158 0 0 chrX 2186925 2186963 -20235864 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1 601 211 268 28 0 chrX 2186952 2187023 -20235804 + T-rich Low_complexity Low_complexity 3 75 0 1 601 22 0 0 0 chrX 2187129 2187151 -20235676 + AT_rich Low_complexity Low_complexity 1 22 0 1 601 198 143 0 0 chrX 2188359 2188394 -20234433 + (TATG)n Simple_repeat Simple_repeat 1 35 0 1 601 219 69 0 0 chrX 2188539 2188568 -20234259 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 601 237 65 0 0 chrX 2188888 2188919 -20233908 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 601 188 243 19 37 chrX 2189202 2189309 -20233518 + (CATA)n Simple_repeat Simple_repeat 1 105 0 1 601 195 42 0 0 chrX 2189741 2189765 -20233062 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 601 23 33 0 0 chrX 2193513 2193543 -20229284 + AT_rich Low_complexity Low_complexity 1 30 0 1 601 216 163 0 0 chrX 2194271 2194314 -20228513 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 601 207 195 0 0 chrX 2194946 2194987 -20227840 + (TTG)n Simple_repeat Simple_repeat 1 41 0 1 601 273 146 0 0 chrX 2195872 2195920 -20226907 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 601 186 103 0 0 chrX 2196001 2196030 -20226797 + (CATA)n Simple_repeat Simple_repeat 3 31 0 1 601 201 39 0 0 chrX 2196322 2196348 -20226479 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 601 222 91 0 0 chrX 2197557 2197590 -20225237 + (CATA)n Simple_repeat Simple_repeat 1 33 0 1 601 204 40 0 0 chrX 2198798 2198823 -20224004 + (CATA)n Simple_repeat Simple_repeat 4 28 0 1 601 224 149 0 21 chrX 2199067 2199115 -20223712 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 601 201 39 0 0 chrX 2200042 2200068 -20222759 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 601 212 247 10 51 chrX 2200832 2200930 -20221897 + (TTTG)n Simple_repeat Simple_repeat 3 96 0 1 601 246 105 0 0 chrX 2202469 2202507 -20220320 + (TATG)n Simple_repeat Simple_repeat 4 41 0 1 601 3799 5 0 0 chrX 2202880 2203297 -20219530 - TIRANT_LTR LTR Gypsy 0 417 1 1 601 71179 0 0 0 chrX 2203297 2210989 -20211838 - TIRANT_I LTR Gypsy 0 7692 1 1 601 3799 5 0 0 chrX 2210989 2211406 -20211421 - TIRANT_LTR LTR Gypsy 0 417 1 1 601 198 150 0 0 chrX 2211415 2211455 -20211372 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 601 216 179 0 0 chrX 2213704 2213743 -20209084 + (TATG)n Simple_repeat Simple_repeat 1 39 0 1 601 201 152 0 0 chrX 2214084 2214117 -20208710 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 601 231 36 0 0 chrX 2215105 2215133 -20207694 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1 601 225 0 0 0 chrX 2217181 2217206 -20205621 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 601 201 147 0 0 chrX 2220842 2220876 -20201951 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 601 208 213 0 62 chrX 2225277 2225342 -20197485 + (CCCGAA)n Simple_repeat Simple_repeat 3 63 0 1 601 234 81 0 0 chrX 2226916 2226953 -20195874 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1 601 220 250 0 0 chrX 2227886 2227950 -20194877 + (CTG)n Simple_repeat Simple_repeat 3 66 0 1 75 198 128 0 0 chrX 2228217 2228256 -20194571 + (TCTCTG)n Simple_repeat Simple_repeat 3 41 0 1 602 238 208 0 0 chrX 2228862 2228915 -20193912 + A-rich Low_complexity Low_complexity 1 53 0 1 602 231 88 0 0 chrX 2229229 2229263 -20193564 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 602 279 190 0 0 chrX 2229844 2229902 -20192925 + (CATA)n Simple_repeat Simple_repeat 3 60 0 1 602 189 0 0 0 chrX 2230156 2230177 -20192650 + (GCTTG)n Simple_repeat Simple_repeat 1 21 0 1 602 204 40 0 0 chrX 2230489 2230514 -20192313 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 602 249 83 0 0 chrX 2232949 2232985 -20189842 + (GCTG)n Simple_repeat Simple_repeat 4 39 0 1 602 23 33 0 0 chrX 2233181 2233211 -20189616 + AT_rich Low_complexity Low_complexity 1 30 0 1 602 270 0 0 0 chrX 2233316 2233346 -20189481 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 602 218 204 0 0 chrX 2234609 2234653 -20188174 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 602 192 77 0 0 chrX 2235978 2236004 -20186823 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1 602 264 59 0 0 chrX 2237595 2237629 -20185198 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 602 234 0 0 0 chrX 2237792 2237818 -20185009 + (CTAAA)n Simple_repeat Simple_repeat 3 28 0 1 602 21 0 0 0 chrX 2238984 2239005 -20183822 + AT_rich Low_complexity Low_complexity 1 21 0 1 602 213 108 0 0 chrX 2239227 2239264 -20183563 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 602 238 69 0 0 chrX 2247800 2247829 -20174998 - FB4_DM DNA Tc1 -1332 2757 2729 1 602 279 0 0 0 chrX 2250107 2250138 -20172689 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 602 258 160 0 0 chrX 2251898 2251948 -20170879 + CT-rich Low_complexity Low_complexity 1 50 0 1 602 240 35 0 0 chrX 2252913 2252942 -20169885 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 602 23 33 0 0 chrX 2256058 2256088 -20166739 + AT_rich Low_complexity Low_complexity 1 30 0 1 602 273 75 0 0 chrX 2256798 2256838 -20165989 + (A)n Simple_repeat Simple_repeat 1 40 0 1 602 23 0 0 0 chrX 2259595 2259618 -20163209 + AT_rich Low_complexity Low_complexity 1 23 0 1 602 213 94 0 0 chrX 2260003 2260035 -20162792 + (ATGTG)n Simple_repeat Simple_repeat 1 32 0 1 602 208 215 45 15 chrX 2260512 2260578 -20162249 + (CCCA)n Simple_repeat Simple_repeat 3 70 0 1 602 273 167 0 0 chrX 2261647 2261701 -20161126 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 1 602 180 0 0 0 chrX 2262074 2262094 -20160733 + (TGAG)n Simple_repeat Simple_repeat 3 22 0 1 602 208 278 0 0 chrX 2263475 2263529 -20159298 + (CTG)n Simple_repeat Simple_repeat 1 54 0 1 602 222 156 0 0 chrX 2264532 2264577 -20158250 + (TCG)n Simple_repeat Simple_repeat 1 45 0 1 602 240 183 0 32 chrX 2265444 2265506 -20157321 + (ATG)n Simple_repeat Simple_repeat 3 62 0 1 602 261 57 0 0 chrX 2269643 2269678 -20153149 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 602 200 214 0 18 chrX 2270376 2270433 -20152394 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 602 224 174 22 0 chrX 2271156 2271202 -20151625 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 602 226 268 12 0 chrX 2276505 2276587 -20146240 + (TGGG)n Simple_repeat Simple_repeat 2 84 0 1 602 210 37 0 0 chrX 2278977 2279004 -20143823 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 602 22 80 0 0 chrX 2279947 2279997 -20142830 + AT_rich Low_complexity Low_complexity 1 50 0 1 602 29 70 0 0 chrX 2280014 2280071 -20142756 + AT_rich Low_complexity Low_complexity 1 57 0 1 602 186 118 0 0 chrX 2280737 2280771 -20142056 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 602 189 0 0 0 chrX 2283980 2284001 -20138826 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 602 24 0 0 0 chrX 2284429 2284453 -20138374 + AT_rich Low_complexity Low_complexity 1 24 0 1 602 23 33 0 0 chrX 2290881 2290911 -20131916 + AT_rich Low_complexity Low_complexity 1 30 0 1 602 4001 2 0 0 chrX 2293925 2294353 -20128474 + ROO_LTR LTR Pao 1 428 0 1 602 60340 1 1 0 chrX 2294353 2300993 -20121834 + ROO_I LTR Pao 1 6649 -1607 1 602 7219 2 1 0 chrX 2300980 2301792 -20121035 + ROO_I LTR Pao 7444 8256 0 1 602 4001 2 0 0 chrX 2301792 2302220 -20120607 + ROO_LTR LTR Pao 1 428 0 1 602 22 70 0 0 chrX 2303449 2303492 -20119335 + AT_rich Low_complexity Low_complexity 1 43 0 1 602 931 303 53 54 chrX 2314048 2318630 -20104197 + SAR_DM Satellite Satellite 1 4577 -449 1 602 218 95 0 23 chrX 2318850 2318893 -20103934 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1 602 26 0 0 0 chrX 2320011 2320037 -20102790 + AT_rich Low_complexity Low_complexity 1 26 0 1 602 3429 50 5 16 chrX 2320037 2320467 -20102360 + G5A_DM LINE Jockey 2417 2841 0 1 602 244 216 46 56 chrX 2320529 2320637 -20102190 + RSP Satellite Satellite 5 111 -7 1 602 189 175 0 0 chrX 2322180 2322220 -20100607 + (CAG)n Simple_repeat Simple_repeat 2 41 0 1 602 300 137 0 0 chrX 2322331 2322382 -20100445 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 602 354 107 0 0 chrX 2322535 2322591 -20100236 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 602 250 269 0 15 chrX 2329299 2329367 -20093460 + G-rich Low_complexity Low_complexity 2 68 0 1 602 195 42 0 0 chrX 2331848 2331872 -20090955 + (AAGTG)n Simple_repeat Simple_repeat 3 26 0 1 602 180 0 0 0 chrX 2339275 2339295 -20083532 + (TTG)n Simple_repeat Simple_repeat 3 22 0 1 602 180 125 0 0 chrX 2342921 2342953 -20079874 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 602 186 43 0 0 chrX 2343084 2343107 -20079720 + (CAG)n Simple_repeat Simple_repeat 2 24 0 1 602 240 214 0 54 chrX 2343708 2343782 -20079045 + (CAG)n Simple_repeat Simple_repeat 3 72 0 1 602 233 224 0 15 chrX 2346385 2346453 -20076374 + (CTG)n Simple_repeat Simple_repeat 3 69 0 1 602 204 40 0 0 chrX 2346590 2346615 -20076212 + (CCCTG)n Simple_repeat Simple_repeat 3 27 0 1 602 259 232 0 18 chrX 2347391 2347448 -20075379 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 602 180 0 0 0 chrX 2349682 2349702 -20073125 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 602 330 213 0 0 chrX 2350244 2350338 -20072489 + (GGATG)n Simple_repeat Simple_repeat 3 96 0 1 602 23 0 0 0 chrX 2353349 2353372 -20069455 + AT_rich Low_complexity Low_complexity 1 23 0 1 602 222 37 0 0 chrX 2356068 2356095 -20066732 + (TACTG)n Simple_repeat Simple_repeat 5 31 0 1 602 24 0 0 0 chrX 2356407 2356431 -20066396 + AT_rich Low_complexity Low_complexity 1 24 0 1 602 203 158 0 0 chrX 2357021 2357059 -20065768 + (TGG)n Simple_repeat Simple_repeat 2 39 0 1 602 272 98 0 56 chrX 2357117 2357171 -20065656 + CT-rich Low_complexity Low_complexity 2 52 0 1 603 207 0 0 0 chrX 2361139 2361162 -20061665 + (A)n Simple_repeat Simple_repeat 1 23 0 1 603 218 214 0 0 chrX 2362160 2362219 -20060608 + (ATG)n Simple_repeat Simple_repeat 1 59 0 1 603 231 186 0 0 chrX 2363831 2363874 -20058953 + CT-rich Low_complexity Low_complexity 2 44 0 1 603 49 32 0 0 chrX 2365261 2365324 -20057503 + AT_rich Low_complexity Low_complexity 1 63 0 1 603 30 45 0 0 chrX 2365494 2365538 -20057289 + AT_rich Low_complexity Low_complexity 1 44 0 1 603 25 0 0 0 chrX 2365649 2365674 -20057153 + AT_rich Low_complexity Low_complexity 1 25 0 1 603 282 231 26 0 chrX 2370196 2370274 -20052553 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 603 279 0 0 0 chrX 2371877 2371908 -20050919 + (T)n Simple_repeat Simple_repeat 1 31 0 1 603 257 211 21 32 chrX 2372302 2372395 -20050432 + A-rich Low_complexity Low_complexity 4 95 0 1 603 217 32 14 127 chrX 2372615 2372686 -20050141 + T-rich Low_complexity Low_complexity 2 64 0 1 603 24 0 0 0 chrX 2373362 2373386 -20049441 + AT_rich Low_complexity Low_complexity 1 24 0 1 603 21 0 0 0 chrX 2373472 2373493 -20049334 + AT_rich Low_complexity Low_complexity 1 21 0 1 603 188 35 35 0 chrX 2373793 2373822 -20049005 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 603 443 134 12 0 chrX 2374283 2374365 -20048462 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 603 186 43 0 0 chrX 2374498 2374521 -20048306 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 603 208 49 73 0 chrX 2374590 2374631 -20048196 + (TTTTC)n Simple_repeat Simple_repeat 1 44 0 1 603 297 75 0 0 chrX 2376795 2376835 -20045992 + (GATTG)n Simple_repeat Simple_repeat 2 41 0 1 603 189 0 0 0 chrX 2379587 2379608 -20043219 + (CAGAGA)n Simple_repeat Simple_repeat 6 26 0 1 603 29 47 0 0 chrX 2380318 2380361 -20042466 + AT_rich Low_complexity Low_complexity 1 43 0 1 603 180 0 0 0 chrX 2380634 2380654 -20042173 + (T)n Simple_repeat Simple_repeat 1 20 0 1 603 21 0 0 0 chrX 2387537 2387558 -20035269 + AT_rich Low_complexity Low_complexity 1 21 0 1 603 258 250 0 14 chrX 2387851 2387924 -20034903 + GA-rich Low_complexity Low_complexity 1 72 0 1 603 224 111 0 22 chrX 2390703 2390749 -20032078 + (TTGG)n Simple_repeat Simple_repeat 2 46 0 1 603 22 35 0 0 chrX 2391928 2391957 -20030870 + AT_rich Low_complexity Low_complexity 1 29 0 1 603 204 40 0 0 chrX 2392293 2392318 -20030509 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 603 24 0 0 0 chrX 2396466 2396490 -20026337 + AT_rich Low_complexity Low_complexity 1 24 0 1 603 204 40 0 0 chrX 2396690 2396715 -20026112 + (CAGA)n Simple_repeat Simple_repeat 3 27 0 1 603 22 0 0 0 chrX 2400406 2400428 -20022399 + AT_rich Low_complexity Low_complexity 1 22 0 1 603 26 30 0 0 chrX 2400492 2400525 -20022302 + AT_rich Low_complexity Low_complexity 1 33 0 1 603 237 180 0 0 chrX 2401690 2401740 -20021087 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 603 26 30 0 0 chrX 2401762 2401795 -20021032 + AT_rich Low_complexity Low_complexity 1 33 0 1 603 244 257 29 0 chrX 2401887 2401957 -20020870 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 1 603 180 0 0 0 chrX 2403194 2403214 -20019613 + (TCC)n Simple_repeat Simple_repeat 1 20 0 1 603 22 0 0 0 chrX 2403388 2403410 -20019417 + AT_rich Low_complexity Low_complexity 1 22 0 1 603 234 0 0 0 chrX 2404674 2404700 -20018127 + (CGAAT)n Simple_repeat Simple_repeat 4 29 0 1 603 21 36 0 0 chrX 2405435 2405463 -20017364 + AT_rich Low_complexity Low_complexity 1 28 0 1 603 390 139 0 0 chrX 2406305 2406377 -20016450 + (TTTG)n Simple_repeat Simple_repeat 3 74 0 1 603 261 119 0 0 chrX 2407219 2407261 -20015566 + (CAACT)n Simple_repeat Simple_repeat 1 42 0 1 603 267 79 0 0 chrX 2409245 2409283 -20013544 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 603 224 30 30 0 chrX 2409391 2409424 -20013403 + (TTTTA)n Simple_repeat Simple_repeat 5 38 0 1 603 276 100 0 0 chrX 2410481 2410521 -20012306 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 1 603 210 136 0 0 chrX 2410894 2410938 -20011889 + (CGAAT)n Simple_repeat Simple_repeat 3 46 0 1 603 342 45 0 0 chrX 2413524 2413568 -20009259 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1 603 223 85 21 21 chrX 2414466 2414514 -20008313 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 603 393 225 0 0 chrX 2415585 2415705 -20007122 + (TTCGGG)n Simple_repeat Simple_repeat 4 123 0 1 603 249 33 0 0 chrX 2421437 2421467 -20001360 + (ACTG)n Simple_repeat Simple_repeat 1 30 0 1 603 183 42 0 0 chrX 2421894 2421918 -20000909 + (GGA)n Simple_repeat Simple_repeat 1 24 0 1 603 300 27 0 0 chrX 2423376 2423413 -19999414 + (TCC)n Simple_repeat Simple_repeat 3 39 0 1 603 249 33 0 0 chrX 2423746 2423776 -19999051 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 603 203 267 0 0 chrX 2425532 2425577 -19997250 + (TTG)n Simple_repeat Simple_repeat 1 45 0 1 603 249 250 0 0 chrX 2426054 2426122 -19996705 + (CACCAT)n Simple_repeat Simple_repeat 4 71 0 1 603 24 32 0 0 chrX 2426822 2426853 -19995974 + AT_rich Low_complexity Low_complexity 1 31 0 1 603 192 40 0 0 chrX 2429489 2429514 -19993313 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1 603 224 232 0 0 chrX 2429521 2429577 -19993250 + T-rich Low_complexity Low_complexity 1 56 0 1 603 21 0 0 0 chrX 2430621 2430642 -19992185 + GC_rich Low_complexity Low_complexity 1 21 0 1 603 198 156 0 0 chrX 2431786 2431831 -19990996 + (CGAAT)n Simple_repeat Simple_repeat 5 49 0 1 603 231 273 65 0 chrX 2432711 2432788 -19990039 - Stalker2_LTR LTR Gypsy -136 288 207 1 603 219 36 0 0 chrX 2433087 2433115 -19989712 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 603 198 0 0 0 chrX 2434697 2434719 -19988108 + (A)n Simple_repeat Simple_repeat 1 22 0 1 603 225 119 0 0 chrX 2434941 2434983 -19987844 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 603 293 68 23 0 chrX 2435178 2435222 -19987605 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 603 21 36 0 0 chrX 2436306 2436334 -19986493 + AT_rich Low_complexity Low_complexity 1 28 0 1 603 24 0 0 0 chrX 2436748 2436772 -19986055 + AT_rich Low_complexity Low_complexity 1 24 0 1 603 222 91 0 0 chrX 2437765 2437798 -19985029 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 603 185 86 0 54 chrX 2439625 2439662 -19983165 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 1 603 23 0 0 0 chrX 2440668 2440691 -19982136 + AT_rich Low_complexity Low_complexity 1 23 0 1 603 29 0 0 0 chrX 2441207 2441236 -19981591 + AT_rich Low_complexity Low_complexity 1 29 0 1 603 209 204 0 0 chrX 2442187 2442236 -19980591 + T-rich Low_complexity Low_complexity 1 49 0 1 603 180 0 0 0 chrX 2442601 2442621 -19980206 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 603 227 31 0 30 chrX 2444917 2444950 -19977877 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 603 231 36 0 0 chrX 2446583 2446611 -19976216 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 603 477 50 0 0 chrX 2446674 2446734 -19976093 + (CAGT)n Simple_repeat Simple_repeat 3 62 0 1 603 264 244 99 11 chrX 2447007 2447098 -19975729 - ROO_I LTR Pao -7506 750 652 1 603 211 211 0 0 chrX 2448300 2448352 -19974475 + A-rich Low_complexity Low_complexity 1 52 0 1 603 183 42 0 0 chrX 2448507 2448531 -19974296 + (A)n Simple_repeat Simple_repeat 1 24 0 1 603 273 75 0 0 chrX 2449202 2449242 -19973585 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 1 603 198 191 0 0 chrX 2449696 2449738 -19973089 + (CCCG)n Simple_repeat Simple_repeat 3 44 0 1 603 300 83 0 0 chrX 2452964 2453012 -19969815 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 603 189 0 0 0 chrX 2453729 2453750 -19969077 + (T)n Simple_repeat Simple_repeat 1 21 0 1 603 223 254 0 0 chrX 2453785 2453840 -19968987 + GA-rich Low_complexity Low_complexity 3 57 0 1 603 201 74 0 0 chrX 2455609 2455636 -19967191 + (TCG)n Simple_repeat Simple_repeat 2 28 0 1 603 180 0 0 0 chrX 2457968 2457988 -19964839 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 603 228 122 0 0 chrX 2459668 2459709 -19963118 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 603 195 167 0 0 chrX 2460383 2460425 -19962402 + A-rich Low_complexity Low_complexity 1 42 0 1 603 24 32 0 0 chrX 2460960 2460991 -19961836 + AT_rich Low_complexity Low_complexity 1 31 0 1 603 234 0 0 0 chrX 2461206 2461232 -19961595 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 603 270 95 0 0 chrX 2465026 2465068 -19957759 + (CAAGC)n Simple_repeat Simple_repeat 5 46 0 1 603 188 86 29 0 chrX 2465245 2465280 -19957547 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 603 216 0 0 0 chrX 2465796 2465820 -19957007 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 603 213 196 0 0 chrX 2471713 2471769 -19951058 + (CAA)n Simple_repeat Simple_repeat 1 56 0 1 603 30 0 0 0 chrX 2474710 2474740 -19948087 + AT_rich Low_complexity Low_complexity 1 30 0 1 603 25 0 0 0 chrX 2476884 2476909 -19945918 + AT_rich Low_complexity Low_complexity 1 25 0 1 603 29 70 0 0 chrX 2479474 2479531 -19943296 + AT_rich Low_complexity Low_complexity 1 57 0 1 603 192 70 45 23 chrX 2481901 2481945 -19940882 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 1 603 299 136 17 0 chrX 2482754 2482813 -19940014 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 603 264 122 0 0 chrX 2483388 2483429 -19939398 + (CAA)n Simple_repeat Simple_repeat 1 41 0 1 603 207 146 0 0 chrX 2486316 2486357 -19936470 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 1 603 200 176 0 0 chrX 2486823 2486857 -19935970 + G-rich Low_complexity Low_complexity 1 34 0 1 603 228 35 0 0 chrX 2488990 2489019 -19933808 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1 604 215 214 0 0 chrX 2492142 2492184 -19930643 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 604 26 0 0 0 chrX 2492458 2492484 -19930343 + AT_rich Low_complexity Low_complexity 1 26 0 1 604 190 56 56 0 chrX 2493099 2493135 -19929692 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 604 22 0 0 0 chrX 2494321 2494343 -19928484 + AT_rich Low_complexity Low_complexity 1 22 0 1 604 2381 8 19 0 chrX 2504472 2504733 -19918094 - DMLTR5 LTR Gypsy 0 266 1 1 604 51560 0 0 0 chrX 2504733 2510294 -19912533 - HMSBEAGLE_I LTR Gypsy 0 6529 969 1 604 974 29 52 12 chrX 2510294 2510466 -19912361 + (TAA)n Simple_repeat Simple_repeat 1 179 0 1 604 6984 2 0 9 chrX 2510466 2511267 -19911560 - HMSBEAGLE_I LTR Gypsy -5733 796 1 1 604 2479 8 0 0 chrX 2511266 2511532 -19911295 - DMLTR5 LTR Gypsy 0 266 1 1 604 25 31 0 0 chrX 2518877 2518909 -19903918 + AT_rich Low_complexity Low_complexity 1 32 0 1 604 203 315 0 0 chrX 2520198 2520271 -19902556 + (CGG)n Simple_repeat Simple_repeat 2 74 0 1 604 207 0 0 0 chrX 2522406 2522429 -19900398 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 604 180 77 0 0 chrX 2523467 2523493 -19899334 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 1 604 21 36 0 0 chrX 2527590 2527618 -19895209 + AT_rich Low_complexity Low_complexity 1 28 0 1 604 222 150 0 0 chrX 2528471 2528511 -19894316 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 604 251 202 0 12 chrX 2528749 2528829 -19893998 + (TG)n Simple_repeat Simple_repeat 1 79 0 1 604 225 0 0 0 chrX 2529671 2529696 -19893131 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1 604 216 163 0 0 chrX 2530121 2530164 -19892663 + GA-rich Low_complexity Low_complexity 2 44 0 1 604 210 128 0 0 chrX 2531413 2531452 -19891375 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 604 180 0 0 0 chrX 2532040 2532060 -19890767 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 604 21 36 0 0 chrX 2532776 2532804 -19890023 + AT_rich Low_complexity Low_complexity 1 28 0 1 604 193 29 29 29 chrX 2533152 2533187 -19889640 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 604 198 0 0 0 chrX 2535551 2535573 -19887254 + (T)n Simple_repeat Simple_repeat 1 22 0 1 604 183 42 0 0 chrX 2536649 2536673 -19886154 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 604 228 233 0 0 chrX 2537313 2537386 -19885441 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 604 200 225 42 14 chrX 2540783 2540855 -19881972 + A-rich Low_complexity Low_complexity 4 77 0 1 604 23 33 0 0 chrX 2541133 2541163 -19881664 + AT_rich Low_complexity Low_complexity 1 30 0 1 604 208 102 0 93 chrX 2542477 2542520 -19880307 + T-rich Low_complexity Low_complexity 2 40 0 1 604 191 36 36 0 chrX 2542551 2542579 -19880248 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 604 183 80 0 0 chrX 2545318 2545343 -19877484 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 1 604 188 67 0 32 chrX 2546529 2546560 -19876267 + (CAAAAA)n Simple_repeat Simple_repeat 4 33 0 1 604 198 0 0 0 chrX 2547158 2547180 -19875647 + (T)n Simple_repeat Simple_repeat 1 22 0 1 604 25 0 0 0 chrX 2549007 2549032 -19873795 + AT_rich Low_complexity Low_complexity 1 25 0 1 604 297 151 0 0 chrX 2553475 2553528 -19869299 + (TAA)n Simple_repeat Simple_repeat 2 54 0 1 604 234 0 0 0 chrX 2554135 2554161 -19868666 + (GGA)n Simple_repeat Simple_repeat 2 27 0 1 604 297 0 0 0 chrX 2555465 2555498 -19867329 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 604 207 146 0 0 chrX 2556839 2556880 -19865947 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 604 237 236 18 0 chrX 2557090 2557145 -19865682 + (TATG)n Simple_repeat Simple_repeat 4 59 0 1 604 183 139 0 0 chrX 2557620 2557656 -19865171 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 1 604 8817 19 19 2 chrX 2558474 2559560 -19863267 - PROTOP_A DNA P 0 1105 1 1 604 26 0 0 0 chrX 2561091 2561117 -19861710 + AT_rich Low_complexity Low_complexity 1 26 0 1 604 208 200 20 20 chrX 2561383 2561434 -19861393 + CT-rich Low_complexity Low_complexity 2 52 0 1 604 27 0 0 0 chrX 2561434 2561461 -19861366 + AT_rich Low_complexity Low_complexity 1 27 0 1 604 27 0 0 0 chrX 2561722 2561749 -19861078 + AT_rich Low_complexity Low_complexity 1 27 0 1 604 21 0 0 0 chrX 2562104 2562125 -19860702 + AT_rich Low_complexity Low_complexity 1 21 0 1 604 206 62 31 0 chrX 2563118 2563150 -19859677 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1 604 205 239 0 0 chrX 2564605 2564651 -19858176 + (CCCGAA)n Simple_repeat Simple_repeat 3 48 0 1 604 184 100 50 0 chrX 2566627 2566667 -19856160 + (ATTTG)n Simple_repeat Simple_repeat 2 43 0 1 604 204 40 0 0 chrX 2567746 2567771 -19855056 + (TATCG)n Simple_repeat Simple_repeat 2 26 0 1 604 315 0 0 0 chrX 2568847 2568882 -19853945 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 604 21 36 0 0 chrX 2568961 2568989 -19853838 + AT_rich Low_complexity Low_complexity 1 28 0 1 604 234 0 0 0 chrX 2569095 2569121 -19853706 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 604 183 42 0 0 chrX 2569423 2569447 -19853380 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 604 189 74 0 0 chrX 2569520 2569547 -19853280 + (GGAGAA)n Simple_repeat Simple_repeat 2 28 0 1 604 207 204 0 0 chrX 2569626 2569680 -19853147 + A-rich Low_complexity Low_complexity 1 54 0 1 604 30 59 0 0 chrX 2569714 2569765 -19853062 + AT_rich Low_complexity Low_complexity 1 51 0 1 604 33 0 0 0 chrX 2569796 2569829 -19852998 + AT_rich Low_complexity Low_complexity 1 33 0 1 604 201 119 23 45 chrX 2570183 2570227 -19852600 + GA-rich Low_complexity Low_complexity 1 43 0 1 604 201 175 0 24 chrX 2570502 2570543 -19852284 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 604 197 65 32 0 chrX 2571424 2571455 -19851372 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 604 297 68 0 0 chrX 2571584 2571628 -19851199 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 604 21 0 0 0 chrX 2571720 2571741 -19851086 + AT_rich Low_complexity Low_complexity 1 21 0 1 604 472 84 12 12 chrX 2572101 2572185 -19850642 + (TA)n Simple_repeat Simple_repeat 1 84 0 1 604 210 329 0 0 chrX 2573064 2573134 -19849693 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 604 183 42 0 0 chrX 2573248 2573272 -19849555 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 604 22 70 0 0 chrX 2573548 2573591 -19849236 + AT_rich Low_complexity Low_complexity 1 43 0 1 604 608 238 23 37 chrX 2573836 2574054 -19848773 - SAR_DM Satellite Satellite -655 817 603 1 604 382 291 0 0 chrX 2573942 2574069 -19848758 + XDMR Unknown Unknown 1 127 -234 1 604 264 314 0 0 chrX 2575101 2575187 -19847640 + (CCG)n Simple_repeat Simple_repeat 1 86 0 1 604 198 0 0 0 chrX 2576865 2576887 -19845940 + (A)n Simple_repeat Simple_repeat 1 22 0 1 604 23 0 0 0 chrX 2592337 2592360 -19830467 + AT_rich Low_complexity Low_complexity 1 23 0 1 604 27 62 0 0 chrX 2598145 2598193 -19824634 + AT_rich Low_complexity Low_complexity 1 48 0 1 604 21 36 0 0 chrX 2600938 2600966 -19821861 + AT_rich Low_complexity Low_complexity 1 28 0 1 604 249 57 0 0 chrX 2602738 2602773 -19820054 + (GTTTG)n Simple_repeat Simple_repeat 5 39 0 1 604 208 135 0 0 chrX 2605681 2605718 -19817109 + (A)n Simple_repeat Simple_repeat 1 37 0 1 604 183 139 0 0 chrX 2607900 2607936 -19814891 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1 604 189 74 0 0 chrX 2613167 2613194 -19809633 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1 604 23 68 0 0 chrX 2618021 2618065 -19804762 + AT_rich Low_complexity Low_complexity 1 44 0 1 604 246 81 0 0 chrX 2619240 2619277 -19803550 + (CAG)n Simple_repeat Simple_repeat 1 37 0 1 605 276 143 0 0 chrX 2625923 2625979 -19796848 + (TGG)n Simple_repeat Simple_repeat 1 56 0 1 605 32 0 0 0 chrX 2626381 2626413 -19796414 + AT_rich Low_complexity Low_complexity 1 32 0 1 605 198 150 0 0 chrX 2632435 2632475 -19790352 + (CGG)n Simple_repeat Simple_repeat 1 40 0 1 605 24 32 0 0 chrX 2632969 2633000 -19789827 + AT_rich Low_complexity Low_complexity 1 31 0 1 605 203 175 0 0 chrX 2636846 2636886 -19785941 + A-rich Low_complexity Low_complexity 2 41 0 1 605 213 39 0 0 chrX 2637827 2637853 -19784974 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 605 246 206 0 0 chrX 2641416 2641484 -19781343 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 605 27 0 0 0 chrX 2644495 2644522 -19778305 + AT_rich Low_complexity Low_complexity 1 27 0 1 605 195 217 0 0 chrX 2646550 2646610 -19776217 + (CAGT)n Simple_repeat Simple_repeat 4 63 0 1 605 267 140 0 0 chrX 2650530 2650580 -19772247 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 605 180 111 0 0 chrX 2650617 2650644 -19772183 + (TCTG)n Simple_repeat Simple_repeat 1 27 0 1 605 182 62 31 0 chrX 2653410 2653442 -19769385 + (CAGTT)n Simple_repeat Simple_repeat 4 36 0 1 605 183 42 0 0 chrX 2655610 2655634 -19767193 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 1 605 251 245 0 0 chrX 2655916 2655965 -19766862 + G-rich Low_complexity Low_complexity 1 49 0 1 605 27 0 0 0 chrX 2657328 2657355 -19765472 + AT_rich Low_complexity Low_complexity 1 27 0 1 605 184 111 44 0 chrX 2658299 2658344 -19764483 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 605 195 100 0 0 chrX 2659699 2659729 -19763098 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 605 25 0 0 0 chrX 2661255 2661280 -19761547 + AT_rich Low_complexity Low_complexity 1 25 0 1 605 206 222 31 16 chrX 2661712 2661776 -19761051 + A-rich Low_complexity Low_complexity 1 65 0 1 605 201 138 0 0 chrX 2662171 2662200 -19760627 + (TATG)n Simple_repeat Simple_repeat 2 30 0 1 605 12075 29 5 3 chrX 2662701 2664169 -19758658 + SAR_DM Satellite Satellite 1 1472 0 1 605 216 0 0 0 chrX 2665092 2665116 -19757711 + (CTAA)n Simple_repeat Simple_repeat 2 25 0 1 605 252 149 0 0 chrX 2665286 2665333 -19757494 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 605 209 139 28 0 chrX 2668091 2668127 -19754700 + (CAA)n Simple_repeat Simple_repeat 3 39 0 1 605 252 299 0 0 chrX 2668933 2669030 -19753797 + GA-rich Low_complexity Low_complexity 2 98 0 1 605 216 67 0 0 chrX 2669136 2669166 -19753661 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 605 303 28 0 0 chrX 2670132 2670168 -19752659 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 605 255 61 0 0 chrX 2671084 2671117 -19751710 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 605 207 69 0 0 chrX 2671367 2671396 -19751431 + (A)n Simple_repeat Simple_repeat 1 29 0 1 605 25 31 0 0 chrX 2673176 2673208 -19749619 + AT_rich Low_complexity Low_complexity 1 32 0 1 605 21 0 0 0 chrX 2675200 2675221 -19747606 + AT_rich Low_complexity Low_complexity 1 21 0 1 605 267 31 0 0 chrX 2682302 2682334 -19740493 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 605 234 105 0 0 chrX 2683419 2683457 -19739370 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 605 247 161 18 18 chrX 2683562 2683619 -19739208 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 605 24 0 0 0 chrX 2683749 2683773 -19739054 + AT_rich Low_complexity Low_complexity 1 24 0 1 605 880 20 0 0 chrX 2685327 2685426 -19737401 + I_DM LINE I 1 99 -6132 1 605 7066 5 0 0 chrX 2685418 2686175 -19736652 + I_DM LINE I 5475 6231 0 1 605 22 56 0 0 chrX 2688304 2688340 -19734487 + AT_rich Low_complexity Low_complexity 1 36 0 1 605 23 0 0 0 chrX 2688501 2688524 -19734303 + AT_rich Low_complexity Low_complexity 1 23 0 1 605 237 65 0 0 chrX 2689915 2689946 -19732881 + (TAGTG)n Simple_repeat Simple_repeat 3 33 0 1 605 288 77 0 0 chrX 2692254 2692293 -19730534 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 605 22 35 0 0 chrX 2694280 2694309 -19728518 + AT_rich Low_complexity Low_complexity 1 29 0 1 605 25 0 0 0 chrX 2694492 2694517 -19728310 + AT_rich Low_complexity Low_complexity 1 25 0 1 605 201 39 0 0 chrX 2695086 2695112 -19727715 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 605 23 0 0 0 chrX 2695325 2695348 -19727479 + AT_rich Low_complexity Low_complexity 1 23 0 1 605 27 62 0 0 chrX 2696924 2696972 -19725855 + AT_rich Low_complexity Low_complexity 1 48 0 1 605 294 227 0 15 chrX 2698192 2698259 -19724568 - DNAREP1_DM LINE Penelope 0 594 529 1 605 189 0 0 0 chrX 2698736 2698757 -19724070 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 605 39 38 0 0 chrX 2699303 2699356 -19723471 + AT_rich Low_complexity Low_complexity 1 53 0 1 605 28 0 0 0 chrX 2699899 2699927 -19722900 + AT_rich Low_complexity Low_complexity 1 28 0 1 605 189 74 0 0 chrX 2700800 2700827 -19722000 + (T)n Simple_repeat Simple_repeat 1 27 0 1 605 22 0 0 0 chrX 2701851 2701873 -19720954 + AT_rich Low_complexity Low_complexity 1 22 0 1 605 32 43 0 0 chrX 2702721 2702767 -19720060 + AT_rich Low_complexity Low_complexity 1 46 0 1 605 402 85 0 0 chrX 2702984 2703043 -19719784 + (ATG)n Simple_repeat Simple_repeat 3 61 0 1 605 195 100 0 0 chrX 2706089 2706119 -19716708 + (T)n Simple_repeat Simple_repeat 1 30 0 1 605 29 0 0 0 chrX 2706223 2706252 -19716575 + AT_rich Low_complexity Low_complexity 1 29 0 1 605 204 193 0 34 chrX 2706398 2706457 -19716370 + T-rich Low_complexity Low_complexity 5 61 0 1 605 233 286 0 0 chrX 2707605 2707668 -19715159 + (CATCC)n Simple_repeat Simple_repeat 1 63 0 1 605 214 157 0 38 chrX 2709207 2709260 -19713567 + (CTG)n Simple_repeat Simple_repeat 1 51 0 1 605 27 62 0 0 chrX 2709510 2709558 -19713269 + AT_rich Low_complexity Low_complexity 1 48 0 1 605 273 220 123 67 chrX 2711789 2711984 -19710843 + XDMR Unknown Unknown 156 361 0 1 605 1238 275 68 26 chrX 2711811 2712501 -19710326 - SAR_DM Satellite Satellite -563 909 191 1 605 21 0 0 0 chrX 2712925 2712946 -19709881 + AT_rich Low_complexity Low_complexity 1 21 0 1 605 207 0 0 0 chrX 2714498 2714521 -19708306 + (A)n Simple_repeat Simple_repeat 1 23 0 1 605 241 140 0 34 chrX 2714734 2714793 -19708034 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 605 198 71 0 0 chrX 2714942 2714970 -19707857 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 605 234 136 0 0 chrX 2716288 2716332 -19706495 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 605 231 181 0 0 chrX 2716488 2716560 -19706267 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 605 30 45 0 0 chrX 2716632 2716676 -19706151 + AT_rich Low_complexity Low_complexity 1 44 0 1 605 198 71 0 0 chrX 2716871 2716899 -19705928 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 605 219 36 0 0 chrX 2717073 2717101 -19705726 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 605 4017 0 0 0 chrX 2717875 2718303 -19704524 - ROO_LTR LTR Pao 0 428 1 1 605 9269 0 0 0 chrX 2718303 2719329 -19703498 - ROO_I LTR Pao 0 8256 7231 1 605 38830 1 1 1 chrX 2719325 2725937 -19696890 - ROO_I LTR Pao -1640 6616 1 1 605 3766 0 0 0 chrX 2725937 2726365 -19696462 - ROO_LTR LTR Pao 0 428 1 1 605 28 48 0 0 chrX 2726764 2726806 -19696021 + AT_rich Low_complexity Low_complexity 1 42 0 1 605 208 143 0 0 chrX 2727308 2727343 -19695484 + (T)n Simple_repeat Simple_repeat 1 35 0 1 605 23 33 0 0 chrX 2728117 2728147 -19694680 + AT_rich Low_complexity Low_complexity 1 30 0 1 605 225 139 0 0 chrX 2728418 2728461 -19694366 + (T)n Simple_repeat Simple_repeat 1 43 0 1 605 183 80 0 0 chrX 2728520 2728545 -19694282 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 605 247 318 0 12 chrX 2729670 2729756 -19693071 + CT-rich Low_complexity Low_complexity 4 88 0 1 605 187 51 0 93 chrX 2730436 2730479 -19692348 + (TTGGGG)n Simple_repeat Simple_repeat 1 39 0 1 605 183 129 0 0 chrX 2731916 2731947 -19690880 + (CTG)n Simple_repeat Simple_repeat 3 33 0 1 605 240 258 0 16 chrX 2732912 2732975 -19689852 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 605 288 77 0 0 chrX 2733124 2733163 -19689664 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1 605 222 170 19 19 chrX 2733867 2733921 -19688906 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 1 605 378 0 0 0 chrX 2733976 2734018 -19688809 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 605 208 211 13 13 chrX 2734249 2734326 -19688501 + CT-rich Low_complexity Low_complexity 4 80 0 1 605 269 131 16 0 chrX 2734664 2734725 -19688102 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 605 243 125 0 0 chrX 2735689 2735729 -19687098 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 605 23 0 0 0 chrX 2736007 2736030 -19686797 + AT_rich Low_complexity Low_complexity 1 23 0 1 605 42 0 0 0 chrX 2736709 2736751 -19686076 + AT_rich Low_complexity Low_complexity 1 42 0 1 605 216 0 0 0 chrX 2737038 2737062 -19685765 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 605 207 0 0 0 chrX 2737753 2737776 -19685051 + (TCCA)n Simple_repeat Simple_repeat 2 24 0 1 605 192 40 0 0 chrX 2738253 2738278 -19684549 + (T)n Simple_repeat Simple_repeat 1 25 0 1 605 2880 28 0 0 chrX 2738987 2739343 -19683484 - MDG1_LTR LTR Gypsy 0 442 87 1 605 423 100 0 0 chrX 2739343 2739413 -19683414 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 605 53293 6 21 1 chrX 2739417 2745898 -19676929 - MDG1_I LTR Gypsy -98 6799 1 1 605 2880 28 0 0 chrX 2745898 2746254 -19676573 - MDG1_LTR LTR Gypsy 0 442 87 1 605 423 100 0 0 chrX 2746254 2746324 -19676503 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 605 231 329 0 0 chrX 2747964 2748037 -19674790 + C-rich Low_complexity Low_complexity 4 76 0 1 605 21 36 0 0 chrX 2748770 2748798 -19674029 + AT_rich Low_complexity Low_complexity 1 28 0 1 605 186 71 0 0 chrX 2748819 2748847 -19673980 + (T)n Simple_repeat Simple_repeat 1 28 0 1 605 339 157 0 0 chrX 2749101 2749171 -19673656 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 605 276 30 0 0 chrX 2749393 2749426 -19673401 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 605 192 179 0 0 chrX 2750635 2750674 -19672153 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 605 378 42 0 0 chrX 2751162 2751210 -19671617 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 605 25 0 0 0 chrX 2751712 2751737 -19671090 + AT_rich Low_complexity Low_complexity 1 25 0 1 606 25 0 0 0 chrX 2752838 2752863 -19669964 + AT_rich Low_complexity Low_complexity 1 25 0 1 606 192 111 0 0 chrX 2754140 2754176 -19668651 + (CAATT)n Simple_repeat Simple_repeat 1 36 0 1 606 240 35 0 0 chrX 2754821 2754850 -19667977 + (CACTT)n Simple_repeat Simple_repeat 2 30 0 1 606 213 338 0 0 chrX 2754899 2754967 -19667860 + C-rich Low_complexity Low_complexity 88 155 0 1 606 204 222 0 18 chrX 2755711 2755766 -19667061 + (TGGG)n Simple_repeat Simple_repeat 3 56 0 1 606 180 77 0 0 chrX 2756681 2756707 -19666120 + (A)n Simple_repeat Simple_repeat 1 26 0 1 606 23 0 0 0 chrX 2757158 2757181 -19665646 + AT_rich Low_complexity Low_complexity 1 23 0 1 606 22 0 0 0 chrX 2757526 2757548 -19665279 + AT_rich Low_complexity Low_complexity 1 22 0 1 606 189 0 0 0 chrX 2758003 2758024 -19664803 + (A)n Simple_repeat Simple_repeat 1 21 0 1 606 24 53 0 0 chrX 2758809 2758847 -19663980 + AT_rich Low_complexity Low_complexity 1 38 0 1 606 24 32 0 0 chrX 2759223 2759254 -19663573 + AT_rich Low_complexity Low_complexity 1 31 0 1 606 21 36 0 0 chrX 2759498 2759526 -19663301 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 237 83 0 0 chrX 2759573 2759609 -19663218 + (T)n Simple_repeat Simple_repeat 1 36 0 1 606 25 31 0 0 chrX 2759915 2759947 -19662880 + AT_rich Low_complexity Low_complexity 1 32 0 1 606 221 119 0 23 chrX 2760102 2760145 -19662682 + (TTTTTA)n Simple_repeat Simple_repeat 4 45 0 1 606 222 105 0 0 chrX 2761842 2761880 -19660947 + (CAGT)n Simple_repeat Simple_repeat 3 40 0 1 606 275 171 102 28 chrX 2763158 2763266 -19659561 - ROO_I LTR Pao -7504 752 637 1 606 207 0 0 0 chrX 2763765 2763788 -19659039 + (A)n Simple_repeat Simple_repeat 1 23 0 1 606 180 125 0 0 chrX 2765526 2765558 -19657269 + (CATA)n Simple_repeat Simple_repeat 4 35 0 1 606 230 276 0 0 chrX 2768345 2768421 -19654406 + T-rich Low_complexity Low_complexity 1 76 0 1 606 21 0 0 0 chrX 2770873 2770894 -19651933 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 261 266 0 0 chrX 2774482 2774561 -19648266 + (CTG)n Simple_repeat Simple_repeat 3 81 0 1 606 251 28 0 27 chrX 2775556 2775593 -19647234 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 606 183 42 0 0 chrX 2776168 2776192 -19646635 + (T)n Simple_repeat Simple_repeat 1 24 0 1 606 189 0 0 0 chrX 2776473 2776494 -19646333 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1 606 360 170 0 39 chrX 2776675 2776779 -19646048 + (TTG)n Simple_repeat Simple_repeat 1 100 0 1 606 258 216 0 0 chrX 2776888 2776962 -19645865 + (CTG)n Simple_repeat Simple_repeat 3 76 0 1 606 21 36 0 0 chrX 2777969 2777997 -19644830 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 330 204 0 0 chrX 2779581 2779694 -19643133 + (TGG)n Simple_repeat Simple_repeat 3 115 0 1 606 26 64 0 0 chrX 2781488 2781535 -19641292 + AT_rich Low_complexity Low_complexity 1 47 0 1 606 24 0 0 0 chrX 2782705 2782729 -19640098 + AT_rich Low_complexity Low_complexity 1 24 0 1 606 273 289 71 13 chrX 2783245 2783399 -19639428 - SAR_DM Satellite Satellite -722 750 588 1 606 375 262 15 15 chrX 2783274 2783406 -19639421 + XDMR Unknown Unknown 3 134 -227 1 606 200 128 0 25 chrX 2787995 2788035 -19634792 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 1 606 220 231 13 13 chrX 2788118 2788197 -19634630 + A-rich Low_complexity Low_complexity 3 81 0 1 606 213 159 0 0 chrX 2792278 2792322 -19630505 + A-rich Low_complexity Low_complexity 1 44 0 1 606 180 0 0 0 chrX 2792416 2792436 -19630391 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 606 23 0 0 0 chrX 2795825 2795848 -19626979 + AT_rich Low_complexity Low_complexity 1 23 0 1 606 315 295 7 14 chrX 2796731 2796872 -19625955 + (TTG)n Simple_repeat Simple_repeat 3 142 0 1 606 198 150 0 0 chrX 2797584 2797624 -19625203 + (A)n Simple_repeat Simple_repeat 1 40 0 1 606 222 62 0 0 chrX 2798539 2798571 -19624256 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 606 273 75 0 0 chrX 2799534 2799574 -19623253 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 606 21 36 0 0 chrX 2799617 2799645 -19623182 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 893 274 49 60 chrX 2799719 2799764 -19623063 - SAR_DM Satellite Satellite -366 1106 981 1 606 1023 210 46 23 chrX 2799764 2800136 -19622691 + XDMR_DM Unknown Unknown 1 361 0 1 606 893 274 49 60 chrX 2800136 2800286 -19622541 - SAR_DM Satellite Satellite -366 980 546 1 606 445 262 14 7 chrX 2800155 2800301 -19622526 + XDMR_DM Unknown Unknown 10 156 -204 1 606 232 275 11 21 chrX 2804594 2804687 -19618140 + T-rich Low_complexity Low_complexity 4 95 0 1 606 21 36 0 0 chrX 2804718 2804746 -19618081 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 21 57 0 0 chrX 2804885 2804920 -19617907 + AT_rich Low_complexity Low_complexity 1 35 0 1 606 204 40 0 0 chrX 2805880 2805905 -19616922 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 606 201 39 0 0 chrX 2806507 2806533 -19616294 + (CTG)n Simple_repeat Simple_repeat 2 27 0 1 606 204 122 0 0 chrX 2811721 2811762 -19611065 + (A)n Simple_repeat Simple_repeat 1 41 0 1 606 201 39 0 0 chrX 2812205 2812231 -19610596 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 606 27 29 0 0 chrX 2813208 2813242 -19609585 + AT_rich Low_complexity Low_complexity 1 34 0 1 606 244 355 0 0 chrX 2817247 2817354 -19605473 + (CGG)n Simple_repeat Simple_repeat 1 107 0 1 606 231 125 0 0 chrX 2818095 2818135 -19604692 + (CCA)n Simple_repeat Simple_repeat 3 42 0 1 606 192 152 0 0 chrX 2818181 2818214 -19604613 + (CCA)n Simple_repeat Simple_repeat 2 34 0 1 606 204 40 0 0 chrX 2823699 2823724 -19599103 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 606 254 267 0 0 chrX 2825078 2825164 -19597663 + GA-rich Low_complexity Low_complexity 2 87 0 1 606 318 329 0 34 chrX 2826303 2826479 -19596348 + GA-rich Low_complexity Low_complexity 3 172 0 1 606 21 36 0 0 chrX 2826704 2826732 -19596095 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 21 0 0 0 chrX 2826807 2826828 -19595999 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 21 0 0 0 chrX 2832100 2832121 -19590706 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 25 31 0 0 chrX 2832812 2832844 -19589983 + AT_rich Low_complexity Low_complexity 1 32 0 1 606 21 0 0 0 chrX 2833661 2833682 -19589145 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 330 273 0 21 chrX 2833790 2833932 -19588895 + (CCA)n Simple_repeat Simple_repeat 2 140 0 1 606 201 301 10 10 chrX 2833956 2834060 -19588767 + (ATG)n Simple_repeat Simple_repeat 3 106 0 1 606 261 303 0 21 chrX 2835755 2835900 -19586927 + (CCA)n Simple_repeat Simple_repeat 3 144 0 1 606 186 192 0 0 chrX 2836126 2836178 -19586649 + (CAG)n Simple_repeat Simple_repeat 1 52 0 1 606 208 321 0 0 chrX 2837864 2837973 -19584854 + (CCA)n Simple_repeat Simple_repeat 3 111 0 1 606 206 309 0 0 chrX 2838013 2838123 -19584704 + GA-rich Low_complexity Low_complexity 2 111 0 1 606 232 331 12 12 chrX 2838355 2838523 -19584304 + (CCG)n Simple_repeat Simple_repeat 3 170 0 1 606 26 0 0 0 chrX 2838902 2838928 -19583899 + AT_rich Low_complexity Low_complexity 1 26 0 1 606 207 0 0 0 chrX 2843066 2843089 -19579738 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 606 288 0 0 0 chrX 2843920 2843952 -19578875 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 606 350 21 0 21 chrX 2844611 2844659 -19578168 + (CCGAA)n Simple_repeat Simple_repeat 1 47 0 1 606 28 0 0 0 chrX 2845783 2845811 -19577016 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 180 0 0 0 chrX 2846220 2846240 -19576587 + (T)n Simple_repeat Simple_repeat 1 20 0 1 606 22 35 0 0 chrX 2847542 2847571 -19575256 + AT_rich Low_complexity Low_complexity 1 29 0 1 606 222 91 0 0 chrX 2847798 2847831 -19574996 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1 606 189 107 0 0 chrX 2847967 2847995 -19574832 + (TGG)n Simple_repeat Simple_repeat 2 29 0 1 606 22 0 0 0 chrX 2849248 2849270 -19573557 + AT_rich Low_complexity Low_complexity 1 22 0 1 606 198 0 0 0 chrX 2849285 2849307 -19573520 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 606 207 0 0 0 chrX 2849947 2849970 -19572857 + (GGA)n Simple_repeat Simple_repeat 3 25 0 1 606 183 146 0 0 chrX 2852505 2852546 -19570281 + (T)n Simple_repeat Simple_repeat 1 41 0 1 606 207 149 0 41 chrX 2855562 2855611 -19567216 + (GATTG)n Simple_repeat Simple_repeat 4 50 0 1 606 36 0 0 0 chrX 2855952 2855988 -19566839 + AT_rich Low_complexity Low_complexity 1 36 0 1 606 243 189 0 0 chrX 2856293 2856346 -19566481 + A-rich Low_complexity Low_complexity 1 53 0 1 606 200 255 0 0 chrX 2857890 2857937 -19564890 + (TTCGGG)n Simple_repeat Simple_repeat 4 50 0 1 606 234 0 0 0 chrX 2858025 2858051 -19564776 + (CAGC)n Simple_repeat Simple_repeat 3 28 0 1 606 210 147 0 0 chrX 2858174 2858208 -19564619 + (CATTT)n Simple_repeat Simple_repeat 3 36 0 1 606 23 33 0 0 chrX 2858263 2858293 -19564534 + AT_rich Low_complexity Low_complexity 1 30 0 1 606 252 59 0 0 chrX 2858732 2858766 -19564061 + (A)n Simple_repeat Simple_repeat 1 34 0 1 606 273 118 0 0 chrX 2859332 2859383 -19563444 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1 606 195 204 0 0 chrX 2859414 2859463 -19563364 + (CAA)n Simple_repeat Simple_repeat 1 49 0 1 606 21 36 0 0 chrX 2859896 2859924 -19562903 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 28 29 0 0 chrX 2861249 2861284 -19561543 + AT_rich Low_complexity Low_complexity 1 35 0 1 606 219 163 23 0 chrX 2862619 2862662 -19560165 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 1 606 321 155 0 0 chrX 2863199 2863257 -19559570 + (TGAA)n Simple_repeat Simple_repeat 1 58 0 1 606 34 24 0 0 chrX 2867033 2867074 -19555753 + AT_rich Low_complexity Low_complexity 1 41 0 1 606 37 0 0 0 chrX 2868134 2868171 -19554656 + AT_rich Low_complexity Low_complexity 1 37 0 1 606 21 0 0 0 chrX 2871282 2871303 -19551524 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 25 0 0 0 chrX 2871506 2871531 -19551296 + AT_rich Low_complexity Low_complexity 1 25 0 1 606 229 261 17 17 chrX 2872954 2873059 -19549768 + T-rich Low_complexity Low_complexity 1 105 0 1 606 249 108 0 0 chrX 2873792 2873829 -19548998 + (CATA)n Simple_repeat Simple_repeat 3 39 0 1 606 234 0 0 0 chrX 2873997 2874023 -19548804 + (GGATG)n Simple_repeat Simple_repeat 4 29 0 1 606 22 88 0 0 chrX 2874450 2874507 -19548320 + AT_rich Low_complexity Low_complexity 1 57 0 1 606 25 31 0 0 chrX 2875627 2875659 -19547168 + AT_rich Low_complexity Low_complexity 1 32 0 1 606 21 36 0 0 chrX 2877148 2877176 -19545651 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 21 36 0 0 chrX 2877605 2877633 -19545194 + AT_rich Low_complexity Low_complexity 1 28 0 1 606 22 56 0 0 chrX 2879436 2879472 -19543355 + AT_rich Low_complexity Low_complexity 1 36 0 1 606 21 0 0 0 chrX 2880178 2880199 -19542628 + AT_rich Low_complexity Low_complexity 1 21 0 1 606 189 74 0 0 chrX 2881695 2881722 -19541105 + (G)n Simple_repeat Simple_repeat 1 27 0 1 606 198 0 0 0 chrX 2883366 2883388 -19539439 + (T)n Simple_repeat Simple_repeat 1 22 0 1 607 198 71 0 0 chrX 2883587 2883615 -19539212 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 607 186 171 0 0 chrX 2884437 2884478 -19538349 + A-rich Low_complexity Low_complexity 2 42 0 1 607 28 29 0 0 chrX 2884897 2884932 -19537895 + AT_rich Low_complexity Low_complexity 1 35 0 1 607 23 0 0 0 chrX 2886587 2886610 -19536217 + AT_rich Low_complexity Low_complexity 1 23 0 1 607 213 108 0 0 chrX 2887587 2887624 -19535203 + (T)n Simple_repeat Simple_repeat 1 37 0 1 607 24 0 0 0 chrX 2887735 2887759 -19535068 + AT_rich Low_complexity Low_complexity 1 24 0 1 607 23 0 0 0 chrX 2888765 2888788 -19534039 + AT_rich Low_complexity Low_complexity 1 23 0 1 607 223 246 0 0 chrX 2888822 2888891 -19533936 + T-rich Low_complexity Low_complexity 1 69 0 1 607 200 100 25 0 chrX 2889194 2889234 -19533593 + (TAAAA)n Simple_repeat Simple_repeat 3 43 0 1 607 21 0 0 0 chrX 2890743 2890764 -19532063 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 183 42 0 0 chrX 2893374 2893398 -19529429 + (GCATG)n Simple_repeat Simple_repeat 5 28 0 1 607 243 0 0 0 chrX 2894573 2894600 -19528227 + (T)n Simple_repeat Simple_repeat 1 27 0 1 607 236 98 59 0 chrX 2895248 2895299 -19527528 + T-rich Low_complexity Low_complexity 2 55 0 1 607 261 0 0 0 chrX 2895956 2895985 -19526842 + (T)n Simple_repeat Simple_repeat 1 29 0 1 607 387 0 0 0 chrX 2899040 2899083 -19523744 + (A)n Simple_repeat Simple_repeat 1 43 0 1 607 318 167 0 0 chrX 2899158 2899218 -19523609 + (CAGT)n Simple_repeat Simple_repeat 4 63 0 1 607 180 0 0 0 chrX 2900398 2900418 -19522409 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 607 22 0 0 0 chrX 2901191 2901213 -19521614 + AT_rich Low_complexity Low_complexity 1 22 0 1 607 21 36 0 0 chrX 2901587 2901615 -19521212 + AT_rich Low_complexity Low_complexity 1 28 0 1 607 190 136 0 43 chrX 2902944 2902990 -19519837 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 607 234 0 0 0 chrX 2904086 2904112 -19518715 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 607 27 0 0 0 chrX 2904576 2904603 -19518224 + AT_rich Low_complexity Low_complexity 1 27 0 1 607 258 105 0 0 chrX 2905390 2905428 -19517399 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1 607 26 0 0 0 chrX 2906083 2906109 -19516718 + AT_rich Low_complexity Low_complexity 1 26 0 1 607 26 50 0 0 chrX 2907560 2907600 -19515227 + AT_rich Low_complexity Low_complexity 1 40 0 1 607 273 119 0 0 chrX 2909815 2909857 -19512970 + (CAGT)n Simple_repeat Simple_repeat 1 42 0 1 607 225 277 0 0 chrX 2911011 2911076 -19511751 + A-rich Low_complexity Low_complexity 1 65 0 1 607 26 50 0 0 chrX 2912885 2912925 -19509902 + AT_rich Low_complexity Low_complexity 1 40 0 1 607 27 0 0 0 chrX 2913784 2913811 -19509016 + AT_rich Low_complexity Low_complexity 1 27 0 1 607 197 65 32 0 chrX 2914126 2914157 -19508670 + (CGAAA)n Simple_repeat Simple_repeat 3 34 0 1 607 315 71 0 0 chrX 2914291 2914333 -19508494 + (CAATC)n Simple_repeat Simple_repeat 1 42 0 1 607 183 80 0 0 chrX 2915978 2916003 -19506824 + (T)n Simple_repeat Simple_repeat 1 25 0 1 607 26 0 0 0 chrX 2917313 2917339 -19505488 + AT_rich Low_complexity Low_complexity 1 26 0 1 607 183 139 0 0 chrX 2917691 2917727 -19505100 + (T)n Simple_repeat Simple_repeat 1 36 0 1 607 204 204 0 0 chrX 2919216 2919260 -19503567 + (CTG)n Simple_repeat Simple_repeat 3 46 0 1 607 279 161 0 0 chrX 2920661 2920717 -19502110 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 607 243 169 0 0 chrX 2922473 2922544 -19500283 + (TCCA)n Simple_repeat Simple_repeat 3 73 0 1 607 22 0 0 0 chrX 2923496 2923518 -19499309 + AT_rich Low_complexity Low_complexity 1 22 0 1 607 189 154 0 0 chrX 2924130 2924169 -19498658 + T-rich Low_complexity Low_complexity 1 39 0 1 607 270 143 0 0 chrX 2926247 2926296 -19496531 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 607 183 42 0 0 chrX 2927247 2927271 -19495556 + (T)n Simple_repeat Simple_repeat 1 24 0 1 607 180 77 0 0 chrX 2929608 2929634 -19493193 + (TCTA)n Simple_repeat Simple_repeat 2 27 0 1 607 224 245 0 0 chrX 2929943 2929996 -19492831 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 607 223 258 0 16 chrX 2930957 2931020 -19491807 + CT-rich Low_complexity Low_complexity 2 63 0 1 607 21 0 0 0 chrX 2933589 2933610 -19489217 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 286 218 11 0 chrX 2933670 2933757 -19489070 + ROO_I LTR Pao 656 743 -7513 1 607 26 30 0 0 chrX 2934417 2934450 -19488377 + AT_rich Low_complexity Low_complexity 1 33 0 1 607 35 0 0 0 chrX 2934476 2934511 -19488316 + AT_rich Low_complexity Low_complexity 1 35 0 1 607 183 139 0 0 chrX 2934771 2934807 -19488020 + (CAG)n Simple_repeat Simple_repeat 1 36 0 1 607 25 0 0 0 chrX 2935254 2935279 -19487548 + AT_rich Low_complexity Low_complexity 1 25 0 1 607 273 98 0 0 chrX 2935520 2935561 -19487266 + (GTTTG)n Simple_repeat Simple_repeat 5 45 0 1 607 21 0 0 0 chrX 2936324 2936345 -19486482 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 180 0 0 0 chrX 2937045 2937065 -19485762 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 607 313 141 0 27 chrX 2937278 2937351 -19485476 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 607 29 28 0 0 chrX 2939577 2939613 -19483214 + AT_rich Low_complexity Low_complexity 1 36 0 1 607 24 0 0 0 chrX 2939628 2939652 -19483175 + AT_rich Low_complexity Low_complexity 1 24 0 1 607 225 240 0 0 chrX 2941276 2941326 -19481501 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 607 182 227 0 13 chrX 2941784 2941860 -19480967 + (CTG)n Simple_repeat Simple_repeat 3 77 0 1 607 216 219 0 0 chrX 2942918 2942959 -19479868 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 607 22 0 0 0 chrX 2943356 2943378 -19479449 + AT_rich Low_complexity Low_complexity 1 22 0 1 607 22 35 0 0 chrX 2943828 2943857 -19478970 + AT_rich Low_complexity Low_complexity 1 29 0 1 607 21 0 0 0 chrX 2945409 2945430 -19477397 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 231 260 0 0 chrX 2946010 2946060 -19476767 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 607 216 97 0 0 chrX 2947714 2947745 -19475082 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 607 279 0 0 0 chrX 2948056 2948087 -19474740 + (A)n Simple_repeat Simple_repeat 1 31 0 1 607 229 273 0 29 chrX 2949679 2949747 -19473080 + (TTCGGG)n Simple_repeat Simple_repeat 4 69 0 1 607 1606 0 0 0 chrX 2952106 2952292 -19470535 - POGON1 DNA Pogo 0 186 1 1 607 189 0 0 0 chrX 2953866 2953887 -19468940 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1 607 210 71 0 0 chrX 2953963 2953991 -19468836 + (CAGAG)n Simple_repeat Simple_repeat 3 30 0 1 607 186 43 0 0 chrX 2954724 2954747 -19468080 + (A)n Simple_repeat Simple_repeat 1 23 0 1 607 231 222 0 0 chrX 2957697 2957751 -19465076 + A-rich Low_complexity Low_complexity 1 54 0 1 607 26 0 0 0 chrX 2958300 2958326 -19464501 + AT_rich Low_complexity Low_complexity 1 26 0 1 607 225 65 0 0 chrX 2958642 2958673 -19464154 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 607 28 61 0 0 chrX 2959082 2959131 -19463696 + AT_rich Low_complexity Low_complexity 1 49 0 1 607 4440 41 20 7 chrX 2964302 2964914 -19457913 + FB4_DM DNA Tc1 1 620 -3469 1 607 6388 52 35 6 chrX 2964931 2965922 -19456905 + FB4_DM DNA Tc1 2760 3779 -310 1 607 435 18 0 0 chrX 2965922 2965978 -19456849 + FB4_DM DNA Tc1 2827 2882 -1207 1 607 10149 8 1 48 chrX 2965978 2967373 -19455454 + FB4_DM DNA Tc1 2760 4089 0 1 607 192 40 0 0 chrX 2967494 2967519 -19455308 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 607 2896 0 0 0 chrX 2969721 2970051 -19452776 + TRANSPAC_LTR LTR Gypsy 1 330 0 1 607 38745 2 0 0 chrX 2970051 2974641 -19448186 + TRANSPAC_I LTR Gypsy 1 4590 0 1 607 2896 0 0 0 chrX 2974640 2974970 -19447857 + TRANSPAC_LTR LTR Gypsy 1 330 0 1 607 208 256 0 0 chrX 2975470 2975513 -19447314 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 1 607 189 74 0 0 chrX 2976423 2976450 -19446377 + (CAACT)n Simple_repeat Simple_repeat 2 28 0 1 607 198 128 0 0 chrX 2976661 2976700 -19446127 + (TATG)n Simple_repeat Simple_repeat 1 39 0 1 607 189 0 0 0 chrX 2977225 2977246 -19445581 + (A)n Simple_repeat Simple_repeat 1 21 0 1 607 21 36 0 0 chrX 2977436 2977464 -19445363 + AT_rich Low_complexity Low_complexity 1 28 0 1 607 378 167 0 0 chrX 2977692 2977776 -19445051 + (TTG)n Simple_repeat Simple_repeat 1 84 0 1 607 288 130 0 0 chrX 2978450 2978496 -19444331 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 607 24 32 0 0 chrX 2978772 2978803 -19444024 + AT_rich Low_complexity Low_complexity 1 31 0 1 607 21 36 0 0 chrX 2979999 2980027 -19442800 + AT_rich Low_complexity Low_complexity 1 28 0 1 607 231 167 0 0 chrX 2980844 2980886 -19441941 + (CATA)n Simple_repeat Simple_repeat 3 44 0 1 607 204 67 0 0 chrX 2981122 2981152 -19441675 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 607 249 33 0 0 chrX 2984305 2984335 -19438492 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 607 315 0 0 0 chrX 2984755 2984790 -19438037 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 607 22 35 0 0 chrX 2985524 2985553 -19437274 + AT_rich Low_complexity Low_complexity 1 29 0 1 607 36 40 0 0 chrX 2985973 2986023 -19436804 + AT_rich Low_complexity Low_complexity 1 50 0 1 607 23 0 0 0 chrX 2987283 2987306 -19435521 + AT_rich Low_complexity Low_complexity 1 23 0 1 607 180 182 0 0 chrX 2988726 2988770 -19434057 + A-rich Low_complexity Low_complexity 1 44 0 1 607 24 32 0 0 chrX 2989498 2989529 -19433298 + AT_rich Low_complexity Low_complexity 1 31 0 1 607 499 309 14 14 chrX 2989552 2989828 -19432999 + SAR_DM Satellite Satellite 557 832 -640 1 607 337 267 33 33 chrX 2989684 2989897 -19432930 - XDMR_DM Unknown Unknown -2 358 146 1 607 195 69 0 0 chrX 2990329 2990358 -19432469 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 607 27 62 0 0 chrX 2990567 2990615 -19432212 + AT_rich Low_complexity Low_complexity 1 48 0 1 607 219 114 0 0 chrX 2991649 2991684 -19431143 + (T)n Simple_repeat Simple_repeat 1 35 0 1 607 50 0 0 0 chrX 2992276 2992326 -19430501 + AT_rich Low_complexity Low_complexity 1 50 0 1 607 26 30 0 0 chrX 2992430 2992463 -19430364 + AT_rich Low_complexity Low_complexity 1 33 0 1 607 25 31 0 0 chrX 2992964 2992996 -19429831 + AT_rich Low_complexity Low_complexity 1 32 0 1 607 204 40 0 0 chrX 2993281 2993306 -19429521 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 607 27 62 0 0 chrX 2993861 2993909 -19428918 + AT_rich Low_complexity Low_complexity 1 48 0 1 607 233 228 0 0 chrX 2994070 2994127 -19428700 + A-rich Low_complexity Low_complexity 1 57 0 1 607 279 0 0 0 chrX 2994223 2994254 -19428573 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1 607 21 0 0 0 chrX 2994488 2994509 -19428318 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 239 93 23 0 chrX 2994869 2994912 -19427915 + (CAAT)n Simple_repeat Simple_repeat 1 44 0 1 607 206 260 0 0 chrX 2995812 2995862 -19426965 + T-rich Low_complexity Low_complexity 1 50 0 1 607 21 82 0 0 chrX 2996073 2996122 -19426705 + AT_rich Low_complexity Low_complexity 1 49 0 1 607 24 32 0 0 chrX 2996188 2996219 -19426608 + AT_rich Low_complexity Low_complexity 1 31 0 1 607 26 30 0 0 chrX 2996483 2996516 -19426311 + AT_rich Low_complexity Low_complexity 1 33 0 1 607 21 0 0 0 chrX 2997537 2997558 -19425269 + AT_rich Low_complexity Low_complexity 1 21 0 1 607 198 103 0 0 chrX 2998203 2998232 -19424595 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 607 201 39 0 0 chrX 2998457 2998483 -19424344 + (A)n Simple_repeat Simple_repeat 1 26 0 1 607 225 94 0 0 chrX 2999671 2999703 -19423124 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 1 607 270 106 0 0 chrX 2999804 2999851 -19422976 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 607 33 0 0 0 chrX 3000598 3000631 -19422196 + AT_rich Low_complexity Low_complexity 1 33 0 1 607 189 0 0 0 chrX 3000746 3000767 -19422060 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1 607 252 0 0 0 chrX 3001014 3001042 -19421785 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 607 216 67 0 0 chrX 3001258 3001288 -19421539 + (A)n Simple_repeat Simple_repeat 1 30 0 1 607 35 41 0 0 chrX 3001699 3001748 -19421079 + AT_rich Low_complexity Low_complexity 1 49 0 1 607 235 222 15 31 chrX 3002270 3002335 -19420492 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 1 607 213 65 0 0 chrX 3002526 3002557 -19420270 + (A)n Simple_repeat Simple_repeat 1 31 0 1 607 27 62 0 0 chrX 3003102 3003150 -19419677 + AT_rich Low_complexity Low_complexity 1 48 0 1 607 28 29 0 0 chrX 3003160 3003195 -19419632 + AT_rich Low_complexity Low_complexity 1 35 0 1 607 191 32 0 61 chrX 3005440 3005473 -19417354 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 1 607 231 36 0 0 chrX 3006012 3006040 -19416787 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 607 201 182 0 0 chrX 3006805 3006860 -19415967 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1 607 218 217 0 0 chrX 3007335 3007381 -19415446 + A-rich Low_complexity Low_complexity 1 46 0 1 607 40 37 0 0 chrX 3008323 3008377 -19414450 + AT_rich Low_complexity Low_complexity 1 54 0 1 607 225 65 0 0 chrX 3009091 3009122 -19413705 + (T)n Simple_repeat Simple_repeat 1 31 0 1 607 216 0 0 0 chrX 3010017 3010041 -19412786 + (T)n Simple_repeat Simple_repeat 1 24 0 1 607 211 283 0 0 chrX 3010993 3011053 -19411774 + T-rich Low_complexity Low_complexity 5 64 0 1 607 198 0 0 0 chrX 3011073 3011095 -19411732 + (T)n Simple_repeat Simple_repeat 1 22 0 1 607 225 0 0 0 chrX 3011823 3011848 -19410979 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1 607 231 306 0 0 chrX 3012366 3012464 -19410363 + T-rich Low_complexity Low_complexity 1 98 0 1 607 180 0 0 0 chrX 3013358 3013378 -19409449 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 607 211 211 39 0 chrX 3014443 3014495 -19408332 + T-rich Low_complexity Low_complexity 2 55 0 1 608 183 100 0 0 chrX 3015108 3015138 -19407689 + (T)n Simple_repeat Simple_repeat 1 30 0 1 608 217 140 17 17 chrX 3015492 3015550 -19407277 + A-rich Low_complexity Low_complexity 3 60 0 1 608 233 49 0 68 chrX 3016268 3016312 -19406515 + (A)n Simple_repeat Simple_repeat 1 41 0 1 608 203 125 24 24 chrX 3016819 3016860 -19405967 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 608 180 0 0 0 chrX 3016964 3016984 -19405843 + (CAA)n Simple_repeat Simple_repeat 3 22 0 1 608 236 271 0 0 chrX 3017178 3017248 -19405579 + T-rich Low_complexity Low_complexity 1 70 0 1 608 187 29 27 54 chrX 3017456 3017493 -19405334 + (TAAAAA)n Simple_repeat Simple_repeat 4 39 0 1 608 216 86 0 0 chrX 3019057 3019092 -19403735 + (A)n Simple_repeat Simple_repeat 1 35 0 1 608 216 0 0 0 chrX 3019459 3019483 -19403344 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 608 200 195 0 0 chrX 3019703 3019744 -19403083 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 608 26 50 0 0 chrX 3019873 3019913 -19402914 + AT_rich Low_complexity Low_complexity 1 40 0 1 608 189 0 0 0 chrX 3020261 3020282 -19402545 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 608 32 0 0 0 chrX 3021102 3021134 -19401693 + AT_rich Low_complexity Low_complexity 1 32 0 1 608 186 71 0 0 chrX 3021910 3021938 -19400889 + (T)n Simple_repeat Simple_repeat 1 28 0 1 608 207 209 0 0 chrX 3022262 3022305 -19400522 + A-rich Low_complexity Low_complexity 1 43 0 1 608 21 0 0 0 chrX 3022480 3022501 -19400326 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 228 86 0 0 chrX 3022940 3022975 -19399852 + (A)n Simple_repeat Simple_repeat 1 35 0 1 608 24 32 0 0 chrX 3025890 3025921 -19396906 + AT_rich Low_complexity Low_complexity 1 31 0 1 608 263 312 13 31 chrX 3026209 3026368 -19396459 + (CGG)n Simple_repeat Simple_repeat 2 157 0 1 608 21 0 0 0 chrX 3026490 3026511 -19396316 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 198 128 0 0 chrX 3026812 3026851 -19395976 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 608 230 221 37 49 chrX 3027147 3027228 -19395599 + A-rich Low_complexity Low_complexity 2 81 0 1 608 225 0 0 0 chrX 3027559 3027584 -19395243 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 608 252 0 0 0 chrX 3027740 3027768 -19395059 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 608 207 125 0 0 chrX 3029165 3029205 -19393622 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 608 182 62 31 0 chrX 3029503 3029535 -19393292 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1 608 204 40 0 0 chrX 3030591 3030616 -19392211 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 608 21 0 0 0 chrX 3031291 3031312 -19391515 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 183 184 0 0 chrX 3032339 3032377 -19390450 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 608 210 221 0 56 chrX 3033191 3033263 -19389564 + A-rich Low_complexity Low_complexity 3 70 0 1 608 240 35 0 0 chrX 3033584 3033613 -19389214 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 608 225 255 0 0 chrX 3033815 3033862 -19388965 + (GCTTG)n Simple_repeat Simple_repeat 3 49 0 1 608 202 261 0 30 chrX 3034110 3034177 -19388650 + T-rich Low_complexity Low_complexity 3 67 0 1 608 24 67 0 0 chrX 3034576 3034621 -19388206 + AT_rich Low_complexity Low_complexity 1 45 0 1 608 204 306 0 0 chrX 3035055 3035127 -19387700 + CT-rich Low_complexity Low_complexity 6 77 0 1 608 219 69 0 0 chrX 3035231 3035260 -19387567 + (TAA)n Simple_repeat Simple_repeat 3 31 0 1 608 219 65 43 21 chrX 3036325 3036372 -19386455 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 608 22 0 0 0 chrX 3036970 3036992 -19385835 + AT_rich Low_complexity Low_complexity 1 22 0 1 608 242 278 10 10 chrX 3037359 3037457 -19385370 + GA-rich Low_complexity Low_complexity 2 99 0 1 608 29 28 0 0 chrX 3038970 3039006 -19383821 + AT_rich Low_complexity Low_complexity 1 36 0 1 608 257 217 32 21 chrX 3039049 3039143 -19383684 + T-rich Low_complexity Low_complexity 4 98 0 1 608 207 0 0 0 chrX 3041057 3041080 -19381747 + (T)n Simple_repeat Simple_repeat 1 23 0 1 608 318 132 0 0 chrX 3041481 3041534 -19381293 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 608 21 0 0 0 chrX 3042108 3042129 -19380698 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 26 0 0 0 chrX 3042674 3042700 -19380127 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 26 0 0 0 chrX 3043050 3043076 -19379751 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 219 88 0 0 chrX 3043316 3043350 -19379477 + (A)n Simple_repeat Simple_repeat 1 34 0 1 608 180 0 0 0 chrX 3044131 3044151 -19378676 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 608 318 108 0 39 chrX 3044843 3044920 -19377907 + (TTTTC)n Simple_repeat Simple_repeat 1 74 0 1 608 218 216 20 0 chrX 3045128 3045179 -19377648 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1 608 192 40 0 0 chrX 3045626 3045651 -19377176 + (TGGA)n Simple_repeat Simple_repeat 3 27 0 1 608 22 0 0 0 chrX 3046936 3046958 -19375869 + AT_rich Low_complexity Low_complexity 1 22 0 1 608 27 29 0 0 chrX 3047014 3047048 -19375779 + AT_rich Low_complexity Low_complexity 1 34 0 1 608 211 182 18 18 chrX 3047836 3047892 -19374935 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 608 270 0 0 0 chrX 3048247 3048277 -19374550 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 608 213 280 0 0 chrX 3048515 3048565 -19374262 + CT-rich Low_complexity Low_complexity 1 50 0 1 608 261 239 15 15 chrX 3049097 3049165 -19373662 + (CTG)n Simple_repeat Simple_repeat 3 70 0 1 608 207 191 0 0 chrX 3052833 3052880 -19369947 + T-rich Low_complexity Low_complexity 1 47 0 1 608 207 0 0 0 chrX 3052926 3052949 -19369878 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 608 207 88 0 0 chrX 3054328 3054362 -19368465 + (T)n Simple_repeat Simple_repeat 1 34 0 1 608 26 0 0 0 chrX 3055006 3055032 -19367795 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 23 0 0 0 chrX 3055944 3055967 -19366860 + AT_rich Low_complexity Low_complexity 1 23 0 1 608 24 0 0 0 chrX 3056115 3056139 -19366688 + AT_rich Low_complexity Low_complexity 1 24 0 1 608 648 87 0 0 chrX 3064438 3064530 -19358297 + (CAG)n Simple_repeat Simple_repeat 1 92 0 1 608 243 114 0 0 chrX 3065321 3065365 -19357462 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 608 257 51 0 25 chrX 3065757 3065797 -19357030 + (TTA)n Simple_repeat Simple_repeat 1 39 0 1 608 189 107 0 0 chrX 3065926 3065954 -19356873 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 1 608 33 0 0 0 chrX 3066266 3066299 -19356528 + AT_rich Low_complexity Low_complexity 1 33 0 1 608 240 59 0 0 chrX 3070270 3070304 -19352523 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 608 34 24 0 0 chrX 3070950 3070991 -19351836 + AT_rich Low_complexity Low_complexity 1 41 0 1 608 21 0 0 0 chrX 3072082 3072103 -19350724 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 4711 4 2 0 chrX 3072555 3073072 -19349755 + NOMAD_LTR LTR Gypsy 1 518 0 1 608 61416 0 1 1 chrX 3073072 3079644 -19343183 + NOMAD_I LTR Gypsy 1 6572 0 1 608 4711 4 2 0 chrX 3079644 3080161 -19342666 + NOMAD_LTR LTR Gypsy 1 518 0 1 608 203 171 0 0 chrX 3080161 3080202 -19342625 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 608 22 0 0 0 chrX 3081338 3081360 -19341467 + AT_rich Low_complexity Low_complexity 1 22 0 1 608 258 81 0 0 chrX 3081925 3081962 -19340865 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1 608 231 222 0 0 chrX 3083165 3083219 -19339608 + T-rich Low_complexity Low_complexity 1 54 0 1 608 194 91 30 0 chrX 3083513 3083546 -19339281 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1 608 21 36 0 0 chrX 3083629 3083657 -19339170 + AT_rich Low_complexity Low_complexity 1 28 0 1 608 183 42 0 0 chrX 3083941 3083965 -19338862 + (A)n Simple_repeat Simple_repeat 1 24 0 1 608 180 77 0 0 chrX 3084690 3084716 -19338111 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 1 608 258 32 0 0 chrX 3085046 3085077 -19337750 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 608 25 31 0 0 chrX 3087457 3087489 -19335338 + AT_rich Low_complexity Low_complexity 1 32 0 1 608 198 0 0 0 chrX 3088158 3088180 -19334647 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 608 23 0 0 0 chrX 3088407 3088430 -19334397 + AT_rich Low_complexity Low_complexity 1 23 0 1 608 21 0 0 0 chrX 3091320 3091341 -19331486 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 186 43 0 0 chrX 3091484 3091507 -19331320 + (A)n Simple_repeat Simple_repeat 1 23 0 1 608 23 0 0 0 chrX 3091930 3091953 -19330874 + AT_rich Low_complexity Low_complexity 1 23 0 1 608 186 189 0 0 chrX 3094020 3094057 -19328770 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 1 608 22 35 0 0 chrX 3094220 3094249 -19328578 + AT_rich Low_complexity Low_complexity 1 29 0 1 608 270 56 0 0 chrX 3095035 3095071 -19327756 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 608 200 244 0 0 chrX 3099368 3099409 -19323418 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 608 186 103 0 0 chrX 3099589 3099618 -19323209 + (A)n Simple_repeat Simple_repeat 1 29 0 1 608 180 0 0 0 chrX 3099919 3099939 -19322888 + (CAAAG)n Simple_repeat Simple_repeat 2 21 0 1 608 232 250 0 0 chrX 3100994 3101062 -19321765 + T-rich Low_complexity Low_complexity 1 68 0 1 608 23 33 0 0 chrX 3101778 3101808 -19321019 + AT_rich Low_complexity Low_complexity 1 30 0 1 608 24 0 0 0 chrX 3103467 3103491 -19319336 + AT_rich Low_complexity Low_complexity 1 24 0 1 608 189 74 0 0 chrX 3105173 3105200 -19317627 + (A)n Simple_repeat Simple_repeat 1 27 0 1 608 34 24 0 0 chrX 3105399 3105440 -19317387 + AT_rich Low_complexity Low_complexity 1 41 0 1 608 26 0 0 0 chrX 3106714 3106740 -19316087 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 21 82 0 0 chrX 3107951 3108000 -19314827 + AT_rich Low_complexity Low_complexity 1 49 0 1 608 21 0 0 0 chrX 3108897 3108918 -19313909 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 291 54 0 0 chrX 3109141 3109178 -19313649 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 608 21 36 0 0 chrX 3109314 3109342 -19313485 + AT_rich Low_complexity Low_complexity 1 28 0 1 608 31 0 0 0 chrX 3109402 3109433 -19313394 + AT_rich Low_complexity Low_complexity 1 31 0 1 608 21 36 0 0 chrX 3110301 3110329 -19312498 + AT_rich Low_complexity Low_complexity 1 28 0 1 608 210 26 24 49 chrX 3112467 3112508 -19310319 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 608 3915 2 0 0 chrX 3112593 3113021 -19309806 - ROO_LTR LTR Pao 0 428 1 1 608 72996 1 3 0 chrX 3113021 3121256 -19301571 - ROO_I LTR Pao 0 8256 1 1 608 3915 2 0 0 chrX 3121256 3121684 -19301143 - ROO_LTR LTR Pao 0 428 1 1 608 53 49 0 0 chrX 3122109 3122190 -19300637 + AT_rich Low_complexity Low_complexity 1 81 0 1 608 183 93 22 44 chrX 3123247 3123292 -19299535 + (CATTT)n Simple_repeat Simple_repeat 5 48 0 1 608 210 156 0 0 chrX 3125873 3125918 -19296909 + A-rich Low_complexity Low_complexity 1 45 0 1 608 29 28 0 0 chrX 3126152 3126188 -19296639 + AT_rich Low_complexity Low_complexity 1 36 0 1 608 254 164 18 0 chrX 3127783 3127838 -19294989 + (TCTG)n Simple_repeat Simple_repeat 1 56 0 1 608 207 0 0 0 chrX 3127966 3127989 -19294838 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 608 210 71 0 0 chrX 3128738 3128766 -19294061 + (A)n Simple_repeat Simple_repeat 1 28 0 1 608 216 67 0 0 chrX 3129531 3129561 -19293266 + (CATA)n Simple_repeat Simple_repeat 1 30 0 1 608 195 173 0 0 chrX 3130828 3130880 -19291947 + T-rich Low_complexity Low_complexity 1 52 0 1 608 26 0 0 0 chrX 3132591 3132617 -19290210 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 219 167 0 0 chrX 3133527 3133569 -19289258 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 608 331 304 0 0 chrX 3134379 3134494 -19288333 + (TGG)n Simple_repeat Simple_repeat 3 117 0 1 608 258 123 60 30 chrX 3134979 3135046 -19287781 + (CTATA)n Simple_repeat Simple_repeat 2 70 0 1 608 243 152 0 0 chrX 3135704 3135750 -19287077 + (CTG)n Simple_repeat Simple_repeat 3 48 0 1 608 224 348 0 0 chrX 3135908 3136020 -19286807 + (TGG)n Simple_repeat Simple_repeat 3 114 0 1 608 331 304 0 0 chrX 3136555 3136670 -19286157 + (CCA)n Simple_repeat Simple_repeat 3 117 0 1 608 26 64 0 0 chrX 3138672 3138719 -19284108 + AT_rich Low_complexity Low_complexity 1 47 0 1 608 357 353 0 17 chrX 3139109 3139282 -19283545 + (CGG)n Simple_repeat Simple_repeat 3 172 0 1 608 291 28 0 0 chrX 3139770 3139806 -19283021 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 608 31 44 0 0 chrX 3140778 3140823 -19282004 + AT_rich Low_complexity Low_complexity 1 45 0 1 608 561 242 35 35 chrX 3140925 3141156 -19281671 + SAR_DM Satellite Satellite 224 454 -1018 1 608 1142 142 5 1 chrX 3141028 3141246 -19281581 - XDMR Unknown Unknown 0 361 142 1 608 26 0 0 0 chrX 3141662 3141688 -19281139 + AT_rich Low_complexity Low_complexity 1 26 0 1 608 390 100 0 0 chrX 3142005 3142065 -19280762 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 608 218 196 0 0 chrX 3142194 3142245 -19280582 + (CACAC)n Simple_repeat Simple_repeat 5 55 0 1 608 189 178 0 0 chrX 3142841 3142886 -19279941 + (TTG)n Simple_repeat Simple_repeat 1 45 0 1 608 200 132 26 0 chrX 3143647 3143685 -19279142 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 608 22 80 0 0 chrX 3143862 3143912 -19278915 + AT_rich Low_complexity Low_complexity 1 50 0 1 608 29 47 0 0 chrX 3145054 3145097 -19277730 + AT_rich Low_complexity Low_complexity 1 43 0 1 609 22 0 0 0 chrX 3149675 3149697 -19273130 + AT_rich Low_complexity Low_complexity 1 22 0 1 609 345 155 0 104 chrX 3150111 3150226 -19272601 + ROO_I LTR Pao 641 743 -7513 1 609 21 0 0 0 chrX 3150398 3150419 -19272408 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 213 39 0 0 chrX 3150734 3150760 -19272067 + (A)n Simple_repeat Simple_repeat 1 26 0 1 609 23 0 0 0 chrX 3151086 3151109 -19271718 + AT_rich Low_complexity Low_complexity 1 23 0 1 609 23 0 0 0 chrX 3151417 3151440 -19271387 + AT_rich Low_complexity Low_complexity 1 23 0 1 609 23 54 0 0 chrX 3151791 3151828 -19270999 + AT_rich Low_complexity Low_complexity 1 37 0 1 609 222 160 0 0 chrX 3151952 3152002 -19270825 + A-rich Low_complexity Low_complexity 1 50 0 1 609 303 319 0 0 chrX 3152167 3152258 -19270569 + G-rich Low_complexity Low_complexity 1 91 0 1 609 26 0 0 0 chrX 3152404 3152430 -19270397 + AT_rich Low_complexity Low_complexity 1 26 0 1 609 207 100 0 0 chrX 3152517 3152547 -19270280 + (A)n Simple_repeat Simple_repeat 1 30 0 1 609 273 155 0 0 chrX 3152773 3152831 -19269996 + A-rich Low_complexity Low_complexity 1 58 0 1 609 30 27 0 0 chrX 3154837 3154874 -19267953 + AT_rich Low_complexity Low_complexity 1 37 0 1 609 225 0 0 0 chrX 3156613 3156638 -19266189 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 609 22 56 0 0 chrX 3158999 3159035 -19263792 + AT_rich Low_complexity Low_complexity 1 36 0 1 609 207 114 0 0 chrX 3159273 3159308 -19263519 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 609 28 0 0 0 chrX 3159891 3159919 -19262908 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 207 0 0 0 chrX 3159954 3159977 -19262850 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 609 24 0 0 0 chrX 3162573 3162597 -19260230 + AT_rich Low_complexity Low_complexity 1 24 0 1 609 180 0 0 0 chrX 3163637 3163657 -19259170 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 609 22 35 0 0 chrX 3164680 3164709 -19258118 + AT_rich Low_complexity Low_complexity 1 29 0 1 609 183 42 0 0 chrX 3165226 3165250 -19257577 + (A)n Simple_repeat Simple_repeat 1 24 0 1 609 26 0 0 0 chrX 3166084 3166110 -19256717 + AT_rich Low_complexity Low_complexity 1 26 0 1 609 23 33 0 0 chrX 3166872 3166902 -19255925 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 306 0 0 0 chrX 3168065 3168099 -19254728 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 609 276 111 0 0 chrX 3172222 3172267 -19250560 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 609 192 125 0 0 chrX 3173258 3173290 -19249537 + (A)n Simple_repeat Simple_repeat 1 32 0 1 609 198 176 0 0 chrX 3174328 3174379 -19248448 + (CAG)n Simple_repeat Simple_repeat 1 51 0 1 609 23 33 0 0 chrX 3175637 3175667 -19247160 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 523 88 22 0 chrX 3175723 3175814 -19247013 + (TA)n Simple_repeat Simple_repeat 2 94 0 1 609 53 0 0 0 chrX 3176292 3176345 -19246482 + AT_rich Low_complexity Low_complexity 1 53 0 1 609 28 71 0 0 chrX 3179704 3179760 -19243067 + AT_rich Low_complexity Low_complexity 1 56 0 1 609 207 170 0 0 chrX 3181180 3181227 -19241600 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 609 240 86 0 0 chrX 3183457 3183492 -19239335 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 609 21 0 0 0 chrX 3183505 3183526 -19239301 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 180 0 0 0 chrX 3184228 3184248 -19238579 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 609 26 50 0 0 chrX 3184882 3184922 -19237905 + AT_rich Low_complexity Low_complexity 1 40 0 1 609 48 77 0 0 chrX 3184971 3185075 -19237752 + AT_rich Low_complexity Low_complexity 1 104 0 1 609 324 236 0 0 chrX 3185294 3185404 -19237423 + (CAA)n Simple_repeat Simple_repeat 1 110 0 1 609 300 70 0 0 chrX 3186919 3186962 -19235865 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 609 189 178 0 0 chrX 3187033 3187078 -19235749 + T-rich Low_complexity Low_complexity 1 45 0 1 609 31 44 0 0 chrX 3187570 3187615 -19235212 + AT_rich Low_complexity Low_complexity 1 45 0 1 609 225 211 19 0 chrX 3188527 3188579 -19234248 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 1 609 220 332 16 8 chrX 3189502 3189683 -19233144 + GA-rich Low_complexity Low_complexity 1 182 0 1 609 240 86 0 0 chrX 3192191 3192226 -19230601 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 609 27 0 0 0 chrX 3192859 3192886 -19229941 + AT_rich Low_complexity Low_complexity 1 27 0 1 609 21 0 0 0 chrX 3193907 3193928 -19228899 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 231 36 0 0 chrX 3194098 3194126 -19228701 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 609 228 35 0 0 chrX 3195675 3195704 -19227123 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 1 609 225 0 0 0 chrX 3196919 3196944 -19225883 + (A)n Simple_repeat Simple_repeat 1 25 0 1 609 30 0 0 0 chrX 3198935 3198965 -19223862 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 229 282 0 0 chrX 3199579 3199650 -19223177 + T-rich Low_complexity Low_complexity 1 71 0 1 609 23 33 0 0 chrX 3200101 3200131 -19222696 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 239 282 0 0 chrX 3200674 3200752 -19222075 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 609 288 255 10 10 chrX 3200815 3200962 -19221865 + (CATATA)n Simple_repeat Simple_repeat 1 147 0 1 609 279 54 0 0 chrX 3201764 3201801 -19221026 + (A)n Simple_repeat Simple_repeat 1 37 0 1 609 225 108 0 0 chrX 3202559 3202596 -19220231 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 609 23 0 0 0 chrX 3202613 3202636 -19220191 + AT_rich Low_complexity Low_complexity 1 23 0 1 609 303 28 0 0 chrX 3202883 3202919 -19219908 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 609 216 0 0 0 chrX 3204926 3204950 -19217877 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 609 224 229 16 0 chrX 3205242 3205303 -19217524 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 609 252 0 0 0 chrX 3206133 3206161 -19216666 + (CAG)n Simple_repeat Simple_repeat 1 28 0 1 609 192 97 0 0 chrX 3206686 3206717 -19216110 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 609 23 33 0 0 chrX 3207094 3207124 -19215703 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 204 268 0 0 chrX 3207951 3207992 -19214835 + (CGG)n Simple_repeat Simple_repeat 1 41 0 1 609 22 56 0 0 chrX 3208795 3208831 -19213996 + AT_rich Low_complexity Low_complexity 1 36 0 1 609 205 171 0 0 chrX 3211082 3211117 -19211710 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 609 195 42 0 0 chrX 3211216 3211240 -19211587 + (TCCA)n Simple_repeat Simple_repeat 4 27 0 1 609 22 56 0 0 chrX 3211441 3211477 -19211350 + AT_rich Low_complexity Low_complexity 1 36 0 1 609 276 30 0 0 chrX 3211663 3211696 -19211131 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 609 213 39 0 0 chrX 3212116 3212142 -19210685 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 609 240 35 0 0 chrX 3212246 3212275 -19210552 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 609 200 200 0 0 chrX 3212670 3212705 -19210122 + GA-rich Low_complexity Low_complexity 2 36 0 1 609 234 0 0 0 chrX 3213803 3213829 -19208998 + (A)n Simple_repeat Simple_repeat 1 26 0 1 609 25 31 0 0 chrX 3214622 3214654 -19208173 + AT_rich Low_complexity Low_complexity 1 32 0 1 609 375 23 0 0 chrX 3215304 3215348 -19207479 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 609 225 0 0 0 chrX 3217112 3217137 -19205690 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1 609 252 0 0 0 chrX 3217730 3217758 -19205069 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 609 414 114 0 0 chrX 3220036 3220115 -19202712 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 1 609 402 57 0 0 chrX 3220903 3220956 -19201871 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 609 229 215 0 44 chrX 3221342 3221410 -19201417 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 609 234 0 0 0 chrX 3221484 3221510 -19201317 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 609 214 140 0 39 chrX 3221728 3221780 -19201047 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1 609 180 111 0 0 chrX 3223291 3223318 -19199509 + (T)n Simple_repeat Simple_repeat 1 27 0 1 609 225 0 0 0 chrX 3223878 3223903 -19198924 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 609 203 161 18 0 chrX 3223970 3224026 -19198801 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 609 21 0 0 0 chrX 3224184 3224205 -19198622 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 231 204 0 0 chrX 3225290 3225339 -19197488 + (CATATA)n Simple_repeat Simple_repeat 6 54 0 1 609 23 54 0 0 chrX 3225851 3225888 -19196939 + AT_rich Low_complexity Low_complexity 1 37 0 1 609 28 0 0 0 chrX 3226271 3226299 -19196528 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 21 0 0 0 chrX 3226449 3226470 -19196357 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 351 127 0 0 chrX 3226796 3226859 -19195968 + (TC)n Simple_repeat Simple_repeat 1 63 0 1 609 21 57 0 0 chrX 3227328 3227363 -19195464 + AT_rich Low_complexity Low_complexity 1 35 0 1 609 297 89 0 0 chrX 3227670 3227715 -19195112 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 609 386 132 0 13 chrX 3227983 3228060 -19194767 + (TTTG)n Simple_repeat Simple_repeat 3 78 0 1 609 249 33 0 0 chrX 3228122 3228152 -19194675 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 609 221 0 0 33 chrX 3228531 3228561 -19194266 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 1 609 29 70 0 0 chrX 3229610 3229667 -19193160 + AT_rich Low_complexity Low_complexity 1 57 0 1 609 192 40 0 0 chrX 3229811 3229836 -19192991 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1 609 261 0 0 0 chrX 3230136 3230165 -19192662 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 609 198 0 0 0 chrX 3230348 3230370 -19192457 + (A)n Simple_repeat Simple_repeat 1 22 0 1 609 216 0 0 0 chrX 3230833 3230857 -19191970 + (CAAAAA)n Simple_repeat Simple_repeat 4 27 0 1 609 23 0 0 0 chrX 3231229 3231252 -19191575 + AT_rich Low_complexity Low_complexity 1 23 0 1 609 183 80 0 0 chrX 3231641 3231666 -19191161 + (CATAT)n Simple_repeat Simple_repeat 4 28 0 1 609 205 89 0 43 chrX 3233291 3233338 -19189489 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 1 609 40 37 0 0 chrX 3234289 3234343 -19188484 + AT_rich Low_complexity Low_complexity 1 54 0 1 609 24 53 0 0 chrX 3234616 3234654 -19188173 + AT_rich Low_complexity Low_complexity 1 38 0 1 609 243 103 0 0 chrX 3235220 3235259 -19187568 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 609 219 157 0 0 chrX 3235572 3235623 -19187204 + A-rich Low_complexity Low_complexity 1 51 0 1 609 225 157 39 0 chrX 3236612 3236663 -19186164 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 609 207 214 0 0 chrX 3236698 3236740 -19186087 + A-rich Low_complexity Low_complexity 1 42 0 1 609 416 51 17 0 chrX 3237457 3237516 -19185311 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 609 183 80 0 0 chrX 3237666 3237691 -19185136 + (A)n Simple_repeat Simple_repeat 1 25 0 1 609 229 178 0 61 chrX 3237778 3237844 -19184983 + A-rich Low_complexity Low_complexity 1 62 0 1 609 207 200 0 0 chrX 3238321 3238366 -19184461 + T-rich Low_complexity Low_complexity 1 45 0 1 609 300 53 0 0 chrX 3240087 3240125 -19182702 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 609 197 86 0 54 chrX 3240166 3240203 -19182624 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 609 29 47 0 0 chrX 3240788 3240831 -19181996 + AT_rich Low_complexity Low_complexity 1 43 0 1 609 261 128 0 0 chrX 3240987 3241034 -19181793 + (TTTTC)n Simple_repeat Simple_repeat 2 48 0 1 609 183 42 0 0 chrX 3242426 3242450 -19180377 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 1 609 192 135 0 0 chrX 3243725 3243762 -19179065 + (T)n Simple_repeat Simple_repeat 1 37 0 1 609 267 31 0 0 chrX 3244626 3244658 -19178169 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 609 36 23 0 0 chrX 3244810 3244853 -19177974 + AT_rich Low_complexity Low_complexity 1 43 0 1 609 201 147 0 0 chrX 3245560 3245594 -19177233 + (ACTG)n Simple_repeat Simple_repeat 2 35 0 1 609 492 111 0 0 chrX 3245640 3245721 -19177106 + (TATATG)n Simple_repeat Simple_repeat 6 86 0 1 609 360 133 0 0 chrX 3245861 3245921 -19176906 + (CAG)n Simple_repeat Simple_repeat 3 62 0 1 609 311 238 0 0 chrX 3246802 3246882 -19175945 + T-rich Low_complexity Low_complexity 6 85 0 1 609 312 182 0 0 chrX 3249049 3249137 -19173690 + A-rich Low_complexity Low_complexity 1 88 0 1 609 42 0 0 0 chrX 3249426 3249468 -19173359 + AT_rich Low_complexity Low_complexity 1 42 0 1 609 31 0 0 0 chrX 3249701 3249732 -19173095 + AT_rich Low_complexity Low_complexity 1 31 0 1 609 25 83 0 0 chrX 3249851 3249911 -19172916 + AT_rich Low_complexity Low_complexity 1 60 0 1 609 291 114 0 0 chrX 3251151 3251195 -19171632 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1 609 240 86 0 0 chrX 3251753 3251788 -19171039 + (T)n Simple_repeat Simple_repeat 1 35 0 1 609 21 0 0 0 chrX 3251985 3252006 -19170821 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 34 55 0 0 chrX 3252405 3252460 -19170367 + AT_rich Low_complexity Low_complexity 1 55 0 1 609 225 0 0 0 chrX 3252564 3252589 -19170238 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 609 293 138 24 24 chrX 3254855 3254937 -19167890 + (CAA)n Simple_repeat Simple_repeat 2 83 0 1 609 223 259 0 71 chrX 3255178 3255319 -19167508 + T-rich Low_complexity Low_complexity 3 133 0 1 609 21 0 0 0 chrX 3255423 3255444 -19167383 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 327 85 0 0 chrX 3255889 3255936 -19166891 + (TTTTA)n Simple_repeat Simple_repeat 3 49 0 1 609 32 91 0 0 chrX 3256370 3256458 -19166369 + AT_rich Low_complexity Low_complexity 1 88 0 1 609 215 225 0 0 chrX 3256963 3257003 -19165824 + (CATA)n Simple_repeat Simple_repeat 4 43 0 1 609 26 0 0 0 chrX 3258230 3258256 -19164571 + AT_rich Low_complexity Low_complexity 1 26 0 1 609 342 0 0 0 chrX 3258494 3258532 -19164295 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1 609 213 226 0 0 chrX 3258655 3258708 -19164119 + T-rich Low_complexity Low_complexity 1 53 0 1 609 201 167 0 0 chrX 3259933 3259969 -19162858 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 609 23 33 0 0 chrX 3262915 3262945 -19159882 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 216 111 0 0 chrX 3263723 3263759 -19159068 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 609 218 280 0 0 chrX 3264342 3264392 -19158435 + (CATA)n Simple_repeat Simple_repeat 4 53 0 1 609 23 33 0 0 chrX 3265518 3265548 -19157279 + AT_rich Low_complexity Low_complexity 1 30 0 1 609 229 337 29 11 chrX 3265868 3266042 -19156785 + (TATG)n Simple_repeat Simple_repeat 4 180 0 1 609 28 29 0 0 chrX 3266635 3266670 -19156157 + AT_rich Low_complexity Low_complexity 1 35 0 1 609 21 36 0 0 chrX 3267498 3267526 -19155301 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 28 0 0 0 chrX 3267768 3267796 -19155031 + AT_rich Low_complexity Low_complexity 1 28 0 1 609 324 221 7 30 chrX 3268231 3268366 -19154461 + (TAAA)n Simple_repeat Simple_repeat 2 133 0 1 609 243 61 0 0 chrX 3270117 3270150 -19152677 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1 609 186 143 0 0 chrX 3270709 3270744 -19152083 + (A)n Simple_repeat Simple_repeat 1 35 0 1 609 292 77 19 19 chrX 3271044 3271097 -19151730 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 609 234 116 0 0 chrX 3271636 3271679 -19151148 + (CTA)n Simple_repeat Simple_repeat 3 45 0 1 609 24 0 0 0 chrX 3274174 3274198 -19148629 + AT_rich Low_complexity Low_complexity 1 24 0 1 609 186 43 0 0 chrX 3275440 3275463 -19147364 + (TTTC)n Simple_repeat Simple_repeat 1 23 0 1 609 221 57 29 0 chrX 3276254 3276289 -19146538 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 609 225 65 0 0 chrX 3276531 3276562 -19146265 + (T)n Simple_repeat Simple_repeat 1 31 0 1 610 24 0 0 0 chrX 3276905 3276929 -19145898 + AT_rich Low_complexity Low_complexity 1 24 0 1 610 23 33 0 0 chrX 3277526 3277556 -19145271 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 289 167 13 13 chrX 3277687 3277766 -19145061 + A-rich Low_complexity Low_complexity 2 80 0 1 610 207 0 0 0 chrX 3279582 3279605 -19143222 + (CATAC)n Simple_repeat Simple_repeat 3 25 0 1 610 213 232 0 0 chrX 3279980 3280049 -19142778 + A-rich Low_complexity Low_complexity 1 69 0 1 610 236 120 20 0 chrX 3280134 3280184 -19142643 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 610 279 79 0 0 chrX 3282002 3282040 -19140787 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 610 54 73 0 0 chrX 3282329 3282439 -19140388 + AT_rich Low_complexity Low_complexity 1 110 0 1 610 23 0 0 0 chrX 3282470 3282493 -19140334 + AT_rich Low_complexity Low_complexity 1 23 0 1 610 26 0 0 0 chrX 3282636 3282662 -19140165 + AT_rich Low_complexity Low_complexity 1 26 0 1 610 23 33 0 0 chrX 3282837 3282867 -19139960 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 228 143 0 0 chrX 3282988 3283030 -19139797 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 610 198 0 0 0 chrX 3284242 3284264 -19138563 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 610 23 0 0 0 chrX 3284433 3284456 -19138371 + AT_rich Low_complexity Low_complexity 1 23 0 1 610 35 41 0 0 chrX 3284662 3284711 -19138116 + AT_rich Low_complexity Low_complexity 1 49 0 1 610 230 229 0 0 chrX 3285041 3285089 -19137738 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 610 21 100 0 0 chrX 3285287 3285357 -19137470 + AT_rich Low_complexity Low_complexity 1 70 0 1 610 232 70 47 0 chrX 3285370 3285413 -19137414 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 610 21 36 0 0 chrX 3285459 3285487 -19137340 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 205 186 0 0 chrX 3285978 3286021 -19136806 + T-rich Low_complexity Low_complexity 1 43 0 1 610 198 91 0 0 chrX 3287855 3287888 -19134939 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 610 25 75 0 0 chrX 3289482 3289535 -19133292 + AT_rich Low_complexity Low_complexity 1 53 0 1 610 205 200 0 0 chrX 3289784 3289824 -19133003 + T-rich Low_complexity Low_complexity 1 40 0 1 610 183 80 0 0 chrX 3290007 3290032 -19132795 + (T)n Simple_repeat Simple_repeat 1 25 0 1 610 22 56 0 0 chrX 3290301 3290337 -19132490 + AT_rich Low_complexity Low_complexity 1 36 0 1 610 312 27 0 0 chrX 3291312 3291349 -19131478 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 1 610 237 65 0 0 chrX 3292038 3292069 -19130758 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 610 369 0 0 0 chrX 3292214 3292255 -19130572 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 610 21 0 0 0 chrX 3293385 3293406 -19129421 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 228 182 0 0 chrX 3293954 3293998 -19128829 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 610 207 100 0 0 chrX 3294102 3294132 -19128695 + (T)n Simple_repeat Simple_repeat 1 30 0 1 610 219 182 0 22 chrX 3294633 3294678 -19128149 + (TATG)n Simple_repeat Simple_repeat 1 44 0 1 610 23 33 0 0 chrX 3294921 3294951 -19127876 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 21 0 0 0 chrX 3295608 3295629 -19127198 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 216 163 0 0 chrX 3295755 3295798 -19127029 + A-rich Low_complexity Low_complexity 1 43 0 1 610 231 61 0 0 chrX 3296328 3296361 -19126466 + (T)n Simple_repeat Simple_repeat 1 33 0 1 610 218 170 19 19 chrX 3297281 3297335 -19125492 + A-rich Low_complexity Low_complexity 2 55 0 1 610 21 0 0 0 chrX 3297840 3297861 -19124966 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 819 105 151 6 chrX 3298297 3298469 -19124358 - S2_DM DNA Tc1 -1538 197 1 1 610 432 161 0 0 chrX 3298888 3298969 -19123858 + (TGAA)n Simple_repeat Simple_repeat 4 84 0 1 610 21 36 0 0 chrX 3300349 3300377 -19122450 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 213 108 0 0 chrX 3300979 3301016 -19121811 + (T)n Simple_repeat Simple_repeat 1 37 0 1 610 180 125 0 0 chrX 3301266 3301298 -19121529 + (TAAAAA)n Simple_repeat Simple_repeat 2 33 0 1 610 23 33 0 0 chrX 3301652 3301682 -19121145 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 189 0 0 0 chrX 3302399 3302420 -19120407 + (T)n Simple_repeat Simple_repeat 1 21 0 1 610 214 226 19 0 chrX 3305246 3305299 -19117528 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 610 23 33 0 0 chrX 3305406 3305436 -19117391 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 22 0 0 0 chrX 3305762 3305784 -19117043 + AT_rich Low_complexity Low_complexity 1 22 0 1 610 30 0 0 0 chrX 3306255 3306285 -19116542 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 238 265 20 30 chrX 3307130 3307231 -19115596 + T-rich Low_complexity Low_complexity 6 105 0 1 610 246 179 0 0 chrX 3308091 3308147 -19114680 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 610 25 0 0 0 chrX 3308320 3308345 -19114482 + AT_rich Low_complexity Low_complexity 1 25 0 1 610 36 0 0 0 chrX 3308462 3308498 -19114329 + AT_rich Low_complexity Low_complexity 1 36 0 1 610 239 242 0 0 chrX 3308866 3308932 -19113895 + T-rich Low_complexity Low_complexity 1 66 0 1 610 3257 6 0 0 chrX 3309105 3309466 -19113361 - BEL_LTR LTR Pao 0 361 1 1 610 49827 0 0 0 chrX 3309466 3314871 -19107956 - BEL_I LTR Pao 0 5404 1 1 610 3282 3 0 0 chrX 3314871 3315232 -19107595 - BEL_LTR LTR Pao 0 361 1 1 610 22 35 0 0 chrX 3315365 3315394 -19107433 + AT_rich Low_complexity Low_complexity 1 29 0 1 610 23 33 0 0 chrX 3315633 3315663 -19107164 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 204 67 0 0 chrX 3316636 3316666 -19106161 + (T)n Simple_repeat Simple_repeat 1 30 0 1 610 216 0 0 0 chrX 3316918 3316942 -19105885 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 610 198 174 0 0 chrX 3317806 3317852 -19104975 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 610 31 0 0 0 chrX 3317923 3317954 -19104873 + AT_rich Low_complexity Low_complexity 1 31 0 1 610 21 36 0 0 chrX 3318912 3318940 -19103887 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 252 0 0 0 chrX 3319514 3319542 -19103285 + (A)n Simple_repeat Simple_repeat 1 28 0 1 610 258 32 0 0 chrX 3320108 3320139 -19102688 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 610 38 0 0 0 chrX 3320789 3320827 -19102000 + AT_rich Low_complexity Low_complexity 1 38 0 1 610 246 62 0 0 chrX 3321095 3321127 -19101700 + (A)n Simple_repeat Simple_repeat 1 32 0 1 610 180 111 0 0 chrX 3321417 3321444 -19101383 + (A)n Simple_repeat Simple_repeat 1 27 0 1 610 761 129 156 7 chrX 3322740 3322881 -19099946 - Gypsy_LTR LTR Gypsy -320 162 1 1 610 22 0 0 0 chrX 3322917 3322939 -19099888 + AT_rich Low_complexity Low_complexity 1 22 0 1 610 30 27 0 0 chrX 3324006 3324043 -19098784 + AT_rich Low_complexity Low_complexity 1 37 0 1 610 483 18 0 0 chrX 3327489 3327545 -19095282 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 610 228 200 0 0 chrX 3327972 3328037 -19094790 + T-rich Low_complexity Low_complexity 1 65 0 1 610 228 67 0 0 chrX 3330689 3330719 -19092108 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 610 186 103 0 0 chrX 3331509 3331538 -19091289 + (A)n Simple_repeat Simple_repeat 1 29 0 1 610 201 74 0 0 chrX 3332482 3332509 -19090318 + (A)n Simple_repeat Simple_repeat 1 27 0 1 610 21 0 0 0 chrX 3333212 3333233 -19089594 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 247 218 0 18 chrX 3333895 3333951 -19088876 + (TATATG)n Simple_repeat Simple_repeat 3 57 0 1 610 205 186 0 0 chrX 3334922 3334965 -19087862 + A-rich Low_complexity Low_complexity 1 43 0 1 610 30 77 0 0 chrX 3335119 3335184 -19087643 + AT_rich Low_complexity Low_complexity 1 65 0 1 610 273 167 0 0 chrX 3336173 3336227 -19086600 + (CATATA)n Simple_repeat Simple_repeat 5 58 0 1 610 24 32 0 0 chrX 3337442 3337473 -19085354 + AT_rich Low_complexity Low_complexity 1 31 0 1 610 29 28 0 0 chrX 3338942 3338978 -19083849 + AT_rich Low_complexity Low_complexity 1 36 0 1 610 23 0 0 0 chrX 3339672 3339695 -19083132 + AT_rich Low_complexity Low_complexity 1 23 0 1 610 180 0 0 0 chrX 3339695 3339715 -19083112 + (A)n Simple_repeat Simple_repeat 1 20 0 1 610 186 103 0 0 chrX 3340616 3340645 -19082182 + (CATA)n Simple_repeat Simple_repeat 4 32 0 1 610 220 208 0 0 chrX 3340788 3340841 -19081986 + A-rich Low_complexity Low_complexity 1 53 0 1 610 198 71 0 0 chrX 3341155 3341183 -19081644 + (T)n Simple_repeat Simple_repeat 1 28 0 1 610 357 24 0 0 chrX 3342713 3342755 -19080072 + (TAA)n Simple_repeat Simple_repeat 3 44 0 1 610 258 32 0 0 chrX 3343092 3343123 -19079704 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 610 213 39 0 0 chrX 3343668 3343694 -19079133 + (CATA)n Simple_repeat Simple_repeat 3 28 0 1 610 213 65 0 0 chrX 3343811 3343842 -19078985 + (A)n Simple_repeat Simple_repeat 1 31 0 1 610 222 171 0 0 chrX 3344001 3344042 -19078785 + (TATG)n Simple_repeat Simple_repeat 4 44 0 1 610 241 188 0 20 chrX 3344287 3344336 -19078491 + (TATG)n Simple_repeat Simple_repeat 4 51 0 1 610 245 196 0 0 chrX 3344803 3344854 -19077973 + T-rich Low_complexity Low_complexity 1 51 0 1 610 378 57 0 0 chrX 3346322 3346375 -19076452 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 610 336 94 0 0 chrX 3347245 3347298 -19075529 + (CATTC)n Simple_repeat Simple_repeat 2 54 0 1 610 207 0 0 0 chrX 3352005 3352028 -19070799 + (CGAT)n Simple_repeat Simple_repeat 3 25 0 1 610 22 35 0 0 chrX 3353057 3353086 -19069741 + AT_rich Low_complexity Low_complexity 1 29 0 1 610 31 0 0 0 chrX 3354583 3354614 -19068213 + AT_rich Low_complexity Low_complexity 1 31 0 1 610 10024 30 69 3 chrX 3358294 3359640 -19063187 - M4DM DNA Transib 0 1435 1 1 610 333 0 0 0 chrX 3359824 3359861 -19062966 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 610 272 120 0 20 chrX 3359864 3359915 -19062912 + (TTCCG)n Simple_repeat Simple_repeat 1 50 0 1 610 26 0 0 0 chrX 3360776 3360802 -19062025 + AT_rich Low_complexity Low_complexity 1 26 0 1 610 225 0 0 0 chrX 3362388 3362413 -19060414 + (T)n Simple_repeat Simple_repeat 1 25 0 1 610 243 0 0 0 chrX 3362470 3362497 -19060330 + (A)n Simple_repeat Simple_repeat 1 27 0 1 610 231 88 0 0 chrX 3362745 3362779 -19060048 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 610 216 0 0 0 chrX 3362914 3362938 -19059889 + (T)n Simple_repeat Simple_repeat 1 24 0 1 610 354 45 0 0 chrX 3363780 3363824 -19059003 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1 610 228 67 0 0 chrX 3363962 3363992 -19058835 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 610 31 0 0 0 chrX 3365129 3365160 -19057667 + AT_rich Low_complexity Low_complexity 1 31 0 1 610 23 0 0 0 chrX 3365651 3365674 -19057153 + AT_rich Low_complexity Low_complexity 1 23 0 1 610 357 117 0 0 chrX 3366767 3366827 -19056000 + (CTG)n Simple_repeat Simple_repeat 3 62 0 1 610 273 308 0 9 chrX 3367006 3367111 -19055716 + (CTG)n Simple_repeat Simple_repeat 1 104 0 1 610 180 111 0 0 chrX 3367303 3367330 -19055497 + (TCTCTG)n Simple_repeat Simple_repeat 1 27 0 1 610 180 77 0 0 chrX 3367665 3367691 -19055136 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1 610 203 176 0 0 chrX 3368175 3368209 -19054618 + (TTG)n Simple_repeat Simple_repeat 1 34 0 1 610 184 79 79 0 chrX 3368448 3368486 -19054341 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 1 610 198 0 0 0 chrX 3368604 3368626 -19054201 + (T)n Simple_repeat Simple_repeat 1 22 0 1 610 35 41 0 0 chrX 3368906 3368955 -19053872 + AT_rich Low_complexity Low_complexity 1 49 0 1 610 231 114 0 0 chrX 3369184 3369219 -19053608 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 610 204 40 0 0 chrX 3369482 3369507 -19053320 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 610 202 211 0 0 chrX 3369766 3369804 -19053023 + A-rich Low_complexity Low_complexity 3 40 0 1 610 227 114 0 22 chrX 3369956 3370001 -19052826 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1 610 21 0 0 0 chrX 3370501 3370522 -19052305 + AT_rich Low_complexity Low_complexity 1 21 0 1 610 217 262 24 0 chrX 3370906 3370990 -19051837 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 610 21 36 0 0 chrX 3371160 3371188 -19051639 + AT_rich Low_complexity Low_complexity 1 28 0 1 610 309 68 0 0 chrX 3371301 3371345 -19051482 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 1 610 213 230 26 26 chrX 3372094 3372170 -19050657 + T-rich Low_complexity Low_complexity 3 78 0 1 610 43 71 0 0 chrX 3375454 3375539 -19047288 + AT_rich Low_complexity Low_complexity 1 85 0 1 610 200 213 0 0 chrX 3382726 3382773 -19040054 + A-rich Low_complexity Low_complexity 1 47 0 1 610 232 0 105 0 chrX 3383405 3383443 -19039384 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 1 610 230 250 0 43 chrX 3384356 3384448 -19038379 + (CAAAT)n Simple_repeat Simple_repeat 4 91 0 1 610 3742 2 0 0 chrX 3387179 3387607 -19035220 - ROO_LTR LTR Pao 0 428 1 1 610 70230 1 1 0 chrX 3387607 3395852 -19026975 - ROO_I LTR Pao 0 8256 1 1 610 3742 2 0 0 chrX 3395852 3396280 -19026547 - ROO_LTR LTR Pao 0 428 1 1 610 215 351 0 0 chrX 3396398 3396472 -19026355 + C-rich Low_complexity Low_complexity 5 78 0 1 610 321 131 0 0 chrX 3397978 3398039 -19024788 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 610 211 104 20 20 chrX 3398715 3398764 -19024063 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 610 24 0 0 0 chrX 3401125 3401149 -19021678 + AT_rich Low_complexity Low_complexity 1 24 0 1 610 24 77 0 0 chrX 3401964 3402016 -19020811 + AT_rich Low_complexity Low_complexity 1 52 0 1 610 217 271 0 0 chrX 3404286 3404345 -19018482 + (CAG)n Simple_repeat Simple_repeat 3 61 0 1 610 30 0 0 0 chrX 3404576 3404606 -19018221 + AT_rich Low_complexity Low_complexity 1 30 0 1 610 281 213 107 0 chrX 3404997 3405072 -19017755 + ROO_I LTR Pao 651 733 -7523 1 610 24 32 0 0 chrX 3405351 3405382 -19017445 + AT_rich Low_complexity Low_complexity 1 31 0 1 610 218 136 0 22 chrX 3405633 3405678 -19017149 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 610 216 122 0 0 chrX 3405705 3405746 -19017081 + (A)n Simple_repeat Simple_repeat 1 41 0 1 610 182 37 0 36 chrX 3407339 3407367 -19015460 + (TTG)n Simple_repeat Simple_repeat 3 29 0 1 611 243 173 0 0 chrX 3408810 3408862 -19013965 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 611 273 75 0 0 chrX 3413223 3413263 -19009564 + (A)n Simple_repeat Simple_repeat 1 40 0 1 611 180 0 0 0 chrX 3415658 3415678 -19007149 + (A)n Simple_repeat Simple_repeat 1 20 0 1 611 32 26 0 0 chrX 3416356 3416395 -19006432 + AT_rich Low_complexity Low_complexity 1 39 0 1 611 202 231 19 0 chrX 3417033 3417085 -19005742 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 611 204 111 0 0 chrX 3420909 3420945 -19001882 + (A)n Simple_repeat Simple_repeat 1 36 0 1 611 27 0 0 0 chrX 3421226 3421253 -19001574 + AT_rich Low_complexity Low_complexity 1 27 0 1 611 183 80 0 0 chrX 3422253 3422278 -19000549 + (TATG)n Simple_repeat Simple_repeat 2 26 0 1 611 185 94 31 0 chrX 3423402 3423434 -18999393 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1 611 31 0 0 0 chrX 3424577 3424608 -18998219 + AT_rich Low_complexity Low_complexity 1 31 0 1 611 216 0 0 0 chrX 3431473 3431497 -18991330 + (A)n Simple_repeat Simple_repeat 1 24 0 1 611 180 77 0 0 chrX 3431669 3431695 -18991132 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 611 207 0 0 0 chrX 3432470 3432493 -18990334 + (A)n Simple_repeat Simple_repeat 1 23 0 1 611 22 0 0 0 chrX 3432708 3432730 -18990097 + AT_rich Low_complexity Low_complexity 1 22 0 1 611 216 0 0 0 chrX 3433015 3433039 -18989788 + (A)n Simple_repeat Simple_repeat 1 24 0 1 611 30 0 0 0 chrX 3433768 3433798 -18989029 + AT_rich Low_complexity Low_complexity 1 30 0 1 611 24 0 0 0 chrX 3438998 3439022 -18983805 + AT_rich Low_complexity Low_complexity 1 24 0 1 611 214 176 0 50 chrX 3439856 3439916 -18982911 + T-rich Low_complexity Low_complexity 3 59 0 1 611 207 114 0 0 chrX 3441051 3441086 -18981741 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 611 21 57 0 0 chrX 3441491 3441526 -18981301 + AT_rich Low_complexity Low_complexity 1 35 0 1 611 28 0 0 0 chrX 3441691 3441719 -18981108 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 234 0 0 0 chrX 3442461 3442487 -18980340 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 611 25 0 0 0 chrX 3446960 3446985 -18975842 + AT_rich Low_complexity Low_complexity 1 25 0 1 611 31 67 0 33 chrX 3447347 3447439 -18975388 + AT_rich Low_complexity Low_complexity 1 89 0 1 611 432 55 0 0 chrX 3447572 3447627 -18975200 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 611 29 60 0 0 chrX 3448845 3448895 -18973932 + AT_rich Low_complexity Low_complexity 1 50 0 1 611 21 36 0 0 chrX 3449613 3449641 -18973186 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 27 29 0 0 chrX 3449705 3449739 -18973088 + AT_rich Low_complexity Low_complexity 1 34 0 1 611 225 65 0 0 chrX 3452469 3452500 -18970327 + (TATG)n Simple_repeat Simple_repeat 4 34 0 1 611 297 0 0 0 chrX 3452552 3452585 -18970242 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 611 237 128 0 0 chrX 3452668 3452715 -18970112 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 611 26 0 0 0 chrX 3454478 3454504 -18968323 + AT_rich Low_complexity Low_complexity 1 26 0 1 611 198 0 0 0 chrX 3455241 3455263 -18967564 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 611 215 229 0 0 chrX 3455384 3455432 -18967395 + (CAA)n Simple_repeat Simple_repeat 1 48 0 1 611 228 259 0 0 chrX 3455527 3455585 -18967242 + A-rich Low_complexity Low_complexity 1 58 0 1 611 315 130 0 0 chrX 3457481 3457535 -18965292 + (TCCA)n Simple_repeat Simple_repeat 4 57 0 1 611 222 91 0 0 chrX 3458201 3458234 -18964593 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 611 261 139 0 0 chrX 3458427 3458470 -18964357 + (CGGA)n Simple_repeat Simple_repeat 3 45 0 1 611 189 229 0 0 chrX 3459641 3459689 -18963138 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 1 611 213 137 37 56 chrX 3462614 3462668 -18960159 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 1 611 204 40 0 0 chrX 3462831 3462856 -18959971 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 611 28 61 0 0 chrX 3467791 3467840 -18954987 + AT_rich Low_complexity Low_complexity 1 49 0 1 611 37 62 0 0 chrX 3468168 3468233 -18954594 + AT_rich Low_complexity Low_complexity 1 65 0 1 611 31 0 0 0 chrX 3468327 3468358 -18954469 + AT_rich Low_complexity Low_complexity 1 31 0 1 611 201 94 0 0 chrX 3468881 3468913 -18953914 + (T)n Simple_repeat Simple_repeat 1 32 0 1 611 21 0 0 0 chrX 3469969 3469990 -18952837 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 211 204 0 0 chrX 3474380 3474424 -18948403 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 611 27 62 0 0 chrX 3474841 3474889 -18947938 + AT_rich Low_complexity Low_complexity 1 48 0 1 611 21 57 0 0 chrX 3475491 3475526 -18947301 + AT_rich Low_complexity Low_complexity 1 35 0 1 611 211 175 17 17 chrX 3476782 3476840 -18945987 + (CATA)n Simple_repeat Simple_repeat 3 60 0 1 611 22 35 0 0 chrX 3477721 3477750 -18945077 + AT_rich Low_complexity Low_complexity 1 29 0 1 611 186 43 0 0 chrX 3478446 3478469 -18944358 + (T)n Simple_repeat Simple_repeat 1 23 0 1 611 26 30 0 0 chrX 3479683 3479716 -18943111 + AT_rich Low_complexity Low_complexity 1 33 0 1 611 240 143 0 0 chrX 3480390 3480432 -18942395 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 611 195 114 0 0 chrX 3480602 3480637 -18942190 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 611 180 111 0 0 chrX 3482685 3482712 -18940115 + (A)n Simple_repeat Simple_repeat 1 27 0 1 611 258 32 0 0 chrX 3484133 3484164 -18938663 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 611 22 0 0 0 chrX 3485716 3485738 -18937089 + AT_rich Low_complexity Low_complexity 1 22 0 1 611 21 0 0 0 chrX 3485774 3485795 -18937032 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 210 128 0 0 chrX 3486413 3486452 -18936375 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 611 23 33 0 0 chrX 3486627 3486657 -18936170 + AT_rich Low_complexity Low_complexity 1 30 0 1 611 21 36 0 0 chrX 3486723 3486751 -18936076 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 23 0 0 0 chrX 3487078 3487101 -18935726 + AT_rich Low_complexity Low_complexity 1 23 0 1 611 198 0 0 0 chrX 3487776 3487798 -18935029 + (A)n Simple_repeat Simple_repeat 1 22 0 1 611 284 182 0 0 chrX 3487942 3487997 -18934830 - DNAREP1_DM LINE Penelope -539 55 1 1 611 204 67 0 0 chrX 3488039 3488069 -18934758 + (T)n Simple_repeat Simple_repeat 1 30 0 1 611 210 210 0 90 chrX 3488165 3488254 -18934573 + (TGGG)n Simple_repeat Simple_repeat 2 82 0 1 611 22 0 0 0 chrX 3490342 3490364 -18932463 + AT_rich Low_complexity Low_complexity 1 22 0 1 611 3766 0 0 0 chrX 3491638 3492066 -18930761 + ROO_LTR LTR Pao 1 428 0 1 611 29302 0 3 0 chrX 3492066 3495510 -18927317 + ROO_I LTR Pao 1 3453 -4803 1 611 3766 0 0 0 chrX 3495546 3495974 -18926853 - ROO_LTR LTR Pao 0 428 1 1 611 34379 1 0 0 chrX 3495974 3500000 -18922827 - ROO_I LTR Pao 0 8256 4230 1 611 11635 0 0 0 chrX 3500000 3501317 -18921510 - ROO_I LTR Pao -4027 4229 2913 1 611 25785 1 1 0 chrX 3501304 3504204 -18918623 + ROO_I LTR Pao 5355 8256 0 1 611 3931 0 0 0 chrX 3504204 3504632 -18918195 + ROO_LTR LTR Pao 1 428 0 1 611 30593 0 2 0 chrX 3504632 3508078 -18914749 + ROO_I LTR Pao 1 3453 -4803 1 611 3931 0 0 0 chrX 3508114 3508542 -18914285 - ROO_LTR LTR Pao 0 428 1 1 611 46253 1 0 0 chrX 3508542 3513748 -18909079 - ROO_I LTR Pao 0 8256 3050 1 611 279 79 0 0 chrX 3514079 3514117 -18908710 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 611 26 0 0 0 chrX 3515437 3515463 -18907364 + AT_rich Low_complexity Low_complexity 1 26 0 1 611 180 77 0 0 chrX 3515759 3515785 -18907042 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 611 231 36 0 0 chrX 3516705 3516733 -18906094 + (ATG)n Simple_repeat Simple_repeat 1 28 0 1 611 24 32 0 0 chrX 3517028 3517059 -18905768 + AT_rich Low_complexity Low_complexity 1 31 0 1 611 21 36 0 0 chrX 3517098 3517126 -18905701 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 212 178 0 22 chrX 3517416 3517462 -18905365 + T-rich Low_complexity Low_complexity 1 45 0 1 611 22 0 0 0 chrX 3518406 3518428 -18904399 + AT_rich Low_complexity Low_complexity 1 22 0 1 611 23 0 0 0 chrX 3518501 3518524 -18904303 + AT_rich Low_complexity Low_complexity 1 23 0 1 611 198 0 0 0 chrX 3521752 3521774 -18901053 + (A)n Simple_repeat Simple_repeat 1 22 0 1 611 180 0 0 0 chrX 3522244 3522264 -18900563 + (T)n Simple_repeat Simple_repeat 1 20 0 1 611 25 31 0 0 chrX 3522482 3522514 -18900313 + AT_rich Low_complexity Low_complexity 1 32 0 1 611 207 219 0 0 chrX 3523075 3523116 -18899711 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 611 183 80 0 0 chrX 3523559 3523584 -18899243 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 611 220 246 0 28 chrX 3525384 3525455 -18897372 + (CAA)n Simple_repeat Simple_repeat 1 69 0 1 611 32 0 0 0 chrX 3526509 3526541 -18896286 + AT_rich Low_complexity Low_complexity 1 32 0 1 611 239 231 30 15 chrX 3527921 3527987 -18894840 + (CATA)n Simple_repeat Simple_repeat 2 68 0 1 611 21 0 0 0 chrX 3529696 3529717 -18893110 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 912 103 0 0 chrX 3530283 3530439 -18892388 + (TATATG)n Simple_repeat Simple_repeat 4 159 0 1 611 230 170 85 0 chrX 3530549 3530596 -18892231 + DNAREP1_DM LINE Penelope 20 70 -524 1 611 223 135 19 19 chrX 3530997 3531050 -18891777 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 1 611 180 77 0 0 chrX 3532450 3532476 -18890351 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1 611 21 36 0 0 chrX 3533254 3533282 -18889545 + AT_rich Low_complexity Low_complexity 1 28 0 1 611 21 0 0 0 chrX 3534260 3534281 -18888546 + AT_rich Low_complexity Low_complexity 1 21 0 1 611 192 135 0 0 chrX 3534420 3534457 -18888370 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 611 180 0 0 0 chrX 3535003 3535023 -18887804 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 611 214 150 50 0 chrX 3535884 3535924 -18886903 + (CATATA)n Simple_repeat Simple_repeat 6 47 0 1 611 25 0 0 0 chrX 3535953 3535978 -18886849 + AT_rich Low_complexity Low_complexity 1 25 0 1 611 30 69 0 0 chrX 3536048 3536106 -18886721 + AT_rich Low_complexity Low_complexity 1 58 0 1 611 23 33 0 0 chrX 3536188 3536218 -18886609 + AT_rich Low_complexity Low_complexity 1 30 0 1 611 23 54 0 0 chrX 3536256 3536293 -18886534 + AT_rich Low_complexity Low_complexity 1 37 0 1 611 23 0 0 0 chrX 3536333 3536356 -18886471 + AT_rich Low_complexity Low_complexity 1 23 0 1 611 183 42 0 0 chrX 3537527 3537551 -18885276 + (A)n Simple_repeat Simple_repeat 1 24 0 1 611 225 200 0 0 chrX 3538292 3538337 -18884490 + A-rich Low_complexity Low_complexity 1 45 0 1 611 21 0 0 0 chrX 3538688 3538709 -18884118 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 578 118 0 21 chrX 3539155 3539250 -18883577 + DNAREP1_DM LINE Penelope 502 594 0 1 612 192 179 0 0 chrX 3540531 3540570 -18882257 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 612 256 48 0 45 chrX 3540719 3540763 -18882064 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 612 207 0 0 0 chrX 3541914 3541937 -18880890 + (CAT)n Simple_repeat Simple_repeat 1 23 0 1 612 255 103 0 0 chrX 3543821 3543860 -18878967 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 612 240 86 0 0 chrX 3543987 3544022 -18878805 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 1 612 231 88 0 0 chrX 3544036 3544070 -18878757 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 612 243 0 0 0 chrX 3544228 3544255 -18878572 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 612 201 125 50 0 chrX 3545549 3545589 -18877238 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 612 28 48 0 0 chrX 3546017 3546059 -18876768 + AT_rich Low_complexity Low_complexity 1 42 0 1 612 26 0 0 0 chrX 3547903 3547929 -18874898 + AT_rich Low_complexity Low_complexity 1 26 0 1 612 231 191 0 0 chrX 3549033 3549101 -18873726 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 612 228 35 0 0 chrX 3549812 3549841 -18872986 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 612 22 0 0 0 chrX 3550554 3550576 -18872251 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 273 29 0 0 chrX 3551214 3551248 -18871579 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 612 240 35 0 0 chrX 3552042 3552071 -18870756 + (TAG)n Simple_repeat Simple_repeat 2 30 0 1 612 276 111 0 0 chrX 3552097 3552142 -18870685 + (ACTG)n Simple_repeat Simple_repeat 2 46 0 1 612 315 0 0 0 chrX 3552718 3552753 -18870074 + (CATA)n Simple_repeat Simple_repeat 4 38 0 1 612 26 0 0 0 chrX 3552972 3552998 -18869829 + AT_rich Low_complexity Low_complexity 1 26 0 1 612 195 129 0 0 chrX 3553264 3553295 -18869532 + (CATATA)n Simple_repeat Simple_repeat 4 34 0 1 612 207 167 0 0 chrX 3553542 3553584 -18869243 + A-rich Low_complexity Low_complexity 1 42 0 1 612 195 42 0 0 chrX 3554425 3554449 -18868378 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 612 758 117 263 10 chrX 3557010 3557208 -18865619 - DM297_LTR LTR Gypsy 0 414 167 1 612 21 36 0 0 chrX 3558253 3558281 -18864546 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 287 49 24 0 chrX 3558707 3558748 -18864079 + (CATA)n Simple_repeat Simple_repeat 3 44 0 1 612 24 53 0 0 chrX 3558792 3558830 -18863997 + AT_rich Low_complexity Low_complexity 1 38 0 1 612 29 70 0 0 chrX 3559200 3559257 -18863570 + AT_rich Low_complexity Low_complexity 1 57 0 1 612 26 30 0 0 chrX 3559477 3559510 -18863317 + AT_rich Low_complexity Low_complexity 1 33 0 1 612 24 0 0 0 chrX 3560757 3560781 -18862046 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 261 57 0 0 chrX 3561784 3561819 -18861008 + (GATTG)n Simple_repeat Simple_repeat 5 39 0 1 612 26 0 0 0 chrX 3563011 3563037 -18859790 + AT_rich Low_complexity Low_complexity 1 26 0 1 612 198 71 0 0 chrX 3566314 3566342 -18856485 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 612 211 186 0 44 chrX 3568548 3568593 -18854234 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 1 612 22 0 0 0 chrX 3570382 3570404 -18852423 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 200 211 0 0 chrX 3570459 3570497 -18852330 + T-rich Low_complexity Low_complexity 4 41 0 1 612 186 73 73 0 chrX 3572084 3572125 -18850702 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 612 212 59 29 0 chrX 3572371 3572405 -18850422 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 612 273 279 0 0 chrX 3574066 3574186 -18848641 + A-rich Low_complexity Low_complexity 1 120 0 1 612 207 300 0 0 chrX 3574209 3574269 -18848558 + CT-rich Low_complexity Low_complexity 1 60 0 1 612 231 257 0 0 chrX 3575384 3575458 -18847369 + (CATATA)n Simple_repeat Simple_repeat 5 78 0 1 612 191 136 0 43 chrX 3576379 3576425 -18846402 + (CATA)n Simple_repeat Simple_repeat 2 45 0 1 612 219 88 0 0 chrX 3576701 3576735 -18846092 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 612 189 241 0 0 chrX 3577837 3577891 -18844936 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 612 21 36 0 0 chrX 3578165 3578193 -18844634 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 22 0 0 0 chrX 3581512 3581534 -18841293 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 30 27 0 0 chrX 3583683 3583720 -18839107 + AT_rich Low_complexity Low_complexity 1 37 0 1 612 28 29 0 0 chrX 3584319 3584354 -18838473 + AT_rich Low_complexity Low_complexity 1 35 0 1 612 210 171 0 0 chrX 3585154 3585195 -18837632 + (CATA)n Simple_repeat Simple_repeat 3 43 0 1 612 21 36 0 0 chrX 3585488 3585516 -18837311 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 216 158 0 0 chrX 3586052 3586090 -18836737 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 612 198 150 0 0 chrX 3586510 3586550 -18836277 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 612 227 250 30 40 chrX 3587636 3587736 -18835091 + ROO_I LTR Pao 633 731 -7525 1 612 263 280 38 19 chrX 3589399 3589559 -18833268 + T-rich Low_complexity Low_complexity 6 168 0 1 612 263 49 24 0 chrX 3591066 3591107 -18831720 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 612 226 213 33 0 chrX 3592076 3592137 -18830690 + T-rich Low_complexity Low_complexity 2 64 0 1 612 216 0 0 0 chrX 3592169 3592193 -18830634 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 612 231 204 0 0 chrX 3592235 3592279 -18830548 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 612 195 114 0 0 chrX 3594322 3594357 -18828470 + (CAT)n Simple_repeat Simple_repeat 3 37 0 1 612 338 74 0 18 chrX 3594794 3594849 -18827978 + (CAA)n Simple_repeat Simple_repeat 2 55 0 1 612 23 33 0 0 chrX 3595138 3595168 -18827659 + AT_rich Low_complexity Low_complexity 1 30 0 1 612 201 39 0 0 chrX 3595274 3595300 -18827527 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1 612 243 114 0 0 chrX 3595505 3595549 -18827278 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 612 21 36 0 0 chrX 3597281 3597309 -18825518 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 281 26 26 0 chrX 3597633 3597671 -18825156 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 612 690 129 157 15 chrX 3597869 3598003 -18824824 + PROTOP DNA P 4312 4464 -16 1 612 222 62 0 0 chrX 3599040 3599072 -18823755 + (TAA)n Simple_repeat Simple_repeat 1 32 0 1 612 198 103 0 0 chrX 3599147 3599176 -18823651 + (CATA)n Simple_repeat Simple_repeat 4 32 0 1 612 39 38 0 0 chrX 3599451 3599504 -18823323 + AT_rich Low_complexity Low_complexity 1 53 0 1 612 234 62 0 0 chrX 3599877 3599909 -18822918 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 612 204 287 20 10 chrX 3600070 3600172 -18822655 + (TTG)n Simple_repeat Simple_repeat 2 104 0 1 612 225 0 0 0 chrX 3603777 3603802 -18819025 + (A)n Simple_repeat Simple_repeat 1 25 0 1 612 180 0 0 0 chrX 3605034 3605054 -18817773 + (T)n Simple_repeat Simple_repeat 1 20 0 1 612 291 93 0 0 chrX 3605610 3605653 -18817174 + (T)n Simple_repeat Simple_repeat 1 43 0 1 612 244 83 42 0 chrX 3607849 3607897 -18814930 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 612 183 42 0 0 chrX 3608391 3608415 -18814412 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 612 198 0 0 0 chrX 3608735 3608757 -18814070 + (T)n Simple_repeat Simple_repeat 1 22 0 1 612 21 0 0 0 chrX 3609164 3609185 -18813642 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 21 0 0 0 chrX 3609267 3609288 -18813539 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 22 0 0 0 chrX 3609436 3609458 -18813369 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 198 0 0 0 chrX 3610702 3610724 -18812103 + (A)n Simple_repeat Simple_repeat 1 22 0 1 612 218 204 0 0 chrX 3612698 3612742 -18810085 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 612 210 150 0 0 chrX 3612907 3612947 -18809880 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 612 228 67 0 0 chrX 3613113 3613143 -18809684 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 612 207 209 0 0 chrX 3614226 3614269 -18808558 + A-rich Low_complexity Low_complexity 1 43 0 1 612 204 150 0 24 chrX 3614490 3614531 -18808296 + (CAAAG)n Simple_repeat Simple_repeat 2 41 0 1 612 267 31 0 0 chrX 3614714 3614746 -18808081 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 612 21 36 0 0 chrX 3615377 3615405 -18807422 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 23 0 0 0 chrX 3615702 3615725 -18807102 + AT_rich Low_complexity Low_complexity 1 23 0 1 612 216 325 0 11 chrX 3617193 3617280 -18805547 + CT-rich Low_complexity Low_complexity 2 87 0 1 612 25 0 0 0 chrX 3618582 3618607 -18804220 + AT_rich Low_complexity Low_complexity 1 25 0 1 612 236 217 0 16 chrX 3618773 3618834 -18803993 + A-rich Low_complexity Low_complexity 1 60 0 1 612 21 57 0 0 chrX 3619691 3619726 -18803101 + AT_rich Low_complexity Low_complexity 1 35 0 1 612 25 0 0 0 chrX 3619761 3619786 -18803041 + AT_rich Low_complexity Low_complexity 1 25 0 1 612 249 83 0 0 chrX 3620690 3620726 -18802101 + (T)n Simple_repeat Simple_repeat 1 36 0 1 612 22 35 0 0 chrX 3620797 3620826 -18802001 + AT_rich Low_complexity Low_complexity 1 29 0 1 612 12723 111 260 34 chrX 3620851 3624186 -18798641 + FB4_DM DNA Tc1 1 4089 0 1 612 200 176 0 0 chrX 3624602 3624636 -18798191 + G-rich Low_complexity Low_complexity 1 34 0 1 612 216 241 19 0 chrX 3624677 3624731 -18798096 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 612 303 28 0 0 chrX 3624795 3624831 -18797996 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 612 255 93 0 0 chrX 3625743 3625786 -18797041 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 612 290 87 22 0 chrX 3625927 3625973 -18796854 + (GAATG)n Simple_repeat Simple_repeat 4 50 0 1 612 200 256 0 0 chrX 3626264 3626303 -18796524 + (CGG)n Simple_repeat Simple_repeat 2 40 0 1 612 259 212 11 66 chrX 3627593 3627684 -18795143 + (CAA)n Simple_repeat Simple_repeat 1 86 0 1 612 315 182 13 0 chrX 3627730 3627807 -18795020 - ROO_I LTR Pao -7546 710 633 1 612 303 211 66 0 chrX 3627993 3628069 -18794758 + ROO_I LTR Pao 645 725 -7531 1 612 222 37 0 0 chrX 3628198 3628225 -18794602 + (TCG)n Simple_repeat Simple_repeat 2 28 0 1 612 207 69 0 0 chrX 3628300 3628329 -18794498 + (A)n Simple_repeat Simple_repeat 1 29 0 1 612 22 35 0 0 chrX 3628476 3628505 -18794322 + AT_rich Low_complexity Low_complexity 1 29 0 1 612 213 94 0 0 chrX 3628992 3629024 -18793803 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 612 217 239 0 43 chrX 3629124 3629194 -18793633 + (CAG)n Simple_repeat Simple_repeat 3 69 0 1 612 249 57 0 0 chrX 3630483 3630518 -18792309 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 612 317 75 0 19 chrX 3632177 3632231 -18790596 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 612 222 37 0 0 chrX 3634261 3634288 -18788539 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1 612 287 200 0 13 chrX 3634872 3634948 -18787879 + GA-rich Low_complexity Low_complexity 1 75 0 1 612 277 198 9 9 chrX 3637390 3637497 -18785330 + (CAA)n Simple_repeat Simple_repeat 2 108 0 1 612 24 32 0 0 chrX 3638203 3638234 -18784593 + AT_rich Low_complexity Low_complexity 1 31 0 1 612 22 35 0 0 chrX 3638287 3638316 -18784511 + AT_rich Low_complexity Low_complexity 1 29 0 1 612 23 33 0 0 chrX 3638370 3638400 -18784427 + AT_rich Low_complexity Low_complexity 1 30 0 1 612 210 259 0 17 chrX 3638753 3638812 -18784015 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 612 234 174 0 0 chrX 3640999 3641045 -18781782 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1 612 247 268 37 0 chrX 3641219 3641301 -18781526 + (TTG)n Simple_repeat Simple_repeat 1 85 0 1 612 282 132 0 0 chrX 3641319 3641372 -18781455 + (CAG)n Simple_repeat Simple_repeat 2 54 0 1 612 246 32 0 0 chrX 3642164 3642195 -18780632 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 612 242 228 0 0 chrX 3642744 3642801 -18780026 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 612 408 200 0 0 chrX 3642951 3643066 -18779761 + GA-rich Low_complexity Low_complexity 2 116 0 1 612 252 0 0 0 chrX 3644413 3644441 -18778386 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 612 195 100 0 0 chrX 3644979 3645009 -18777818 + (CGGGG)n Simple_repeat Simple_repeat 5 34 0 1 612 205 100 40 0 chrX 3645149 3645199 -18777628 + (TTTTTG)n Simple_repeat Simple_repeat 1 52 0 1 612 271 308 16 8 chrX 3646155 3646276 -18776551 + (CATATA)n Simple_repeat Simple_repeat 1 122 0 1 612 22 0 0 0 chrX 3646578 3646600 -18776227 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 4503 4 0 0 chrX 3647510 3648017 -18774810 - DM176_LTR LTR Gypsy 0 507 1 1 612 55959 1 0 9 chrX 3648017 3654496 -18768331 - DM176_I LTR Gypsy 0 6420 1 1 612 4503 4 0 0 chrX 3654496 3655003 -18767824 - DM176_LTR LTR Gypsy 0 507 1 1 612 186 43 0 0 chrX 3655457 3655480 -18767347 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 612 195 42 0 0 chrX 3655575 3655599 -18767228 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 612 189 226 0 0 chrX 3656288 3656341 -18766486 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 612 412 93 13 13 chrX 3656578 3656654 -18766173 + (CAA)n Simple_repeat Simple_repeat 1 76 0 1 612 224 186 0 17 chrX 3656767 3656827 -18766000 + (CAA)n Simple_repeat Simple_repeat 2 60 0 1 612 202 222 18 36 chrX 3657211 3657267 -18765560 + (TATG)n Simple_repeat Simple_repeat 3 57 0 1 612 21 0 0 0 chrX 3658891 3658912 -18763915 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 363 82 0 0 chrX 3659795 3659844 -18762983 + DNAREP1_DM LINE Penelope 518 566 -28 1 612 182 118 29 0 chrX 3660192 3660226 -18762601 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 612 217 219 0 0 chrX 3662341 3662382 -18760445 + GA-rich Low_complexity Low_complexity 4 44 0 1 612 24 0 0 0 chrX 3662443 3662467 -18760360 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 251 202 13 0 chrX 3662637 3662716 -18760111 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 612 257 120 40 0 chrX 3664214 3664264 -18758563 + (TATG)n Simple_repeat Simple_repeat 2 53 0 1 612 192 77 0 0 chrX 3664499 3664525 -18758302 + (TATG)n Simple_repeat Simple_repeat 2 27 0 1 612 236 176 39 0 chrX 3665000 3665051 -18757776 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 612 252 0 0 0 chrX 3665448 3665476 -18757351 + (CATA)n Simple_repeat Simple_repeat 2 29 0 1 612 22 0 0 0 chrX 3666177 3666199 -18756628 + AT_rich Low_complexity Low_complexity 1 22 0 1 612 183 205 0 0 chrX 3669652 3669691 -18753136 + (TATG)n Simple_repeat Simple_repeat 1 39 0 1 613 243 263 0 17 chrX 3671154 3671212 -18751615 + TART LINE telomeric 6277 6333 -8144 1 613 284 275 0 81 chrX 3671165 3671276 -18751551 + ROO_I LTR Pao 636 737 -7519 1 613 200 214 24 0 chrX 3671411 3671453 -18751374 + CT-rich Low_complexity Low_complexity 2 44 0 1 613 200 208 21 0 chrX 3673272 3673320 -18749507 + CT-rich Low_complexity Low_complexity 3 51 0 1 613 285 51 0 0 chrX 3673874 3673913 -18748914 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 613 210 250 0 0 chrX 3675741 3675797 -18747030 + (CAA)n Simple_repeat Simple_repeat 1 56 0 1 613 262 212 0 103 chrX 3675825 3675941 -18746886 + ROO_I LTR Pao 641 744 -7512 1 613 298 274 11 0 chrX 3675941 3676036 -18746791 + (CAG)n Simple_repeat Simple_repeat 3 98 0 1 613 285 98 0 0 chrX 3677064 3677105 -18745722 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 613 279 114 0 0 chrX 3677868 3677912 -18744915 + (CAG)n Simple_repeat Simple_repeat 1 44 0 1 613 210 193 0 0 chrX 3678044 3678101 -18744726 + (TGG)n Simple_repeat Simple_repeat 1 57 0 1 613 25 51 0 0 chrX 3679581 3679620 -18743207 + AT_rich Low_complexity Low_complexity 1 39 0 1 613 1557 33 0 8 chrX 3679922 3680172 -18742655 + (TTA)n Simple_repeat Simple_repeat 1 248 0 1 613 265 123 0 0 chrX 3680293 3680350 -18742477 + ROO_I LTR Pao 662 718 -7538 1 613 284 297 8 15 chrX 3680470 3680600 -18742227 + (CAG)n Simple_repeat Simple_repeat 3 131 0 1 613 254 270 0 0 chrX 3680796 3680870 -18741957 + (CAG)n Simple_repeat Simple_repeat 3 76 0 1 613 412 111 22 0 chrX 3681236 3681326 -18741501 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 613 29 0 0 0 chrX 3681357 3681386 -18741441 + AT_rich Low_complexity Low_complexity 1 29 0 1 613 21 36 0 0 chrX 3681486 3681514 -18741313 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 198 0 0 0 chrX 3681530 3681552 -18741275 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 613 435 68 0 0 chrX 3681552 3681610 -18741217 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 613 31 0 0 0 chrX 3681876 3681907 -18740920 + AT_rich Low_complexity Low_complexity 1 31 0 1 613 24 0 0 0 chrX 3682362 3682386 -18740441 + AT_rich Low_complexity Low_complexity 1 24 0 1 613 22 35 0 0 chrX 3682807 3682836 -18739991 + AT_rich Low_complexity Low_complexity 1 29 0 1 613 226 188 0 20 chrX 3682840 3682889 -18739938 + (TTA)n Simple_repeat Simple_repeat 2 49 0 1 613 252 228 0 48 chrX 3683122 3683205 -18739622 + A-rich Low_complexity Low_complexity 4 82 0 1 613 25 65 0 0 chrX 3683260 3683306 -18739521 + AT_rich Low_complexity Low_complexity 1 46 0 1 613 224 167 21 0 chrX 3683331 3683379 -18739448 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 613 210 216 22 74 chrX 3683672 3683807 -18739020 + A-rich Low_complexity Low_complexity 4 131 0 1 613 29 0 0 0 chrX 3684130 3684159 -18738668 + AT_rich Low_complexity Low_complexity 1 29 0 1 613 215 214 0 0 chrX 3686424 3686466 -18736361 + (CTCA)n Simple_repeat Simple_repeat 1 42 0 1 613 37 23 0 0 chrX 3686966 3687010 -18735817 + AT_rich Low_complexity Low_complexity 1 44 0 1 613 381 123 0 0 chrX 3688768 3688825 -18734002 - DNAREP1_DM LINE Penelope 0 594 538 1 613 1135 36 0 7 chrX 3688843 3688983 -18733844 - DNAREP1_DM LINE Penelope -451 143 5 1 613 2248 132 55 36 chrX 3690427 3690842 -18731985 - Invader1_LTR LTR Gypsy 0 423 1 1 613 189 196 0 0 chrX 3695513 3695559 -18727268 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 1 613 37 23 0 0 chrX 3696059 3696103 -18726724 + AT_rich Low_complexity Low_complexity 1 44 0 1 613 381 123 0 0 chrX 3697861 3697918 -18724909 - DNAREP1_DM LINE Penelope 0 594 538 1 613 1133 35 0 20 chrX 3697936 3698082 -18724745 - DNAREP1_DM LINE Penelope -451 143 1 1 613 339 96 0 0 chrX 3700749 3700801 -18722026 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 613 198 0 0 0 chrX 3700858 3700880 -18721947 + (A)n Simple_repeat Simple_repeat 1 22 0 1 613 208 255 20 0 chrX 3701772 3701823 -18721004 + (CATA)n Simple_repeat Simple_repeat 2 53 0 1 613 22 0 0 0 chrX 3702973 3702995 -18719832 + AT_rich Low_complexity Low_complexity 1 22 0 1 613 309 125 0 0 chrX 3703744 3703800 -18719027 + (CAG)n Simple_repeat Simple_repeat 1 56 0 1 613 234 0 0 0 chrX 3703951 3703977 -18718850 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 613 217 220 0 0 chrX 3703978 3704028 -18718799 + (CCA)n Simple_repeat Simple_repeat 1 50 0 1 613 366 107 0 0 chrX 3704609 3704665 -18718162 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 613 186 43 0 0 chrX 3708576 3708599 -18714228 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 613 225 65 0 0 chrX 3709204 3709235 -18713592 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 1 613 195 100 0 0 chrX 3711510 3711540 -18711287 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 613 225 94 0 0 chrX 3717005 3717037 -18705790 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 613 468 86 0 0 chrX 3726149 3726219 -18696608 + (CTG)n Simple_repeat Simple_repeat 1 70 0 1 613 285 177 12 25 chrX 3726468 3726549 -18696278 + (CAAA)n Simple_repeat Simple_repeat 1 80 0 1 613 192 40 0 0 chrX 3729605 3729630 -18693197 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 613 207 302 0 16 chrX 3730746 3730810 -18692017 + (CAG)n Simple_repeat Simple_repeat 3 65 0 1 613 210 37 0 0 chrX 3733215 3733242 -18689585 + (TAAAAA)n Simple_repeat Simple_repeat 3 29 0 1 613 21 36 0 0 chrX 3734455 3734483 -18688344 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 1699 0 0 0 chrX 3736407 3736593 -18686234 - POGON1 DNA Pogo 0 186 1 1 613 21 0 0 0 chrX 3738734 3738755 -18684072 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 254 29 29 0 chrX 3739602 3739637 -18683190 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 613 230 116 23 0 chrX 3739702 3739745 -18683082 + (TTCGGG)n Simple_repeat Simple_repeat 5 48 0 1 613 237 65 0 0 chrX 3739860 3739891 -18682936 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 613 201 195 0 0 chrX 3740676 3740717 -18682110 + (CATA)n Simple_repeat Simple_repeat 3 43 0 1 613 228 35 0 0 chrX 3740840 3740869 -18681958 + (CACTC)n Simple_repeat Simple_repeat 3 31 0 1 613 215 217 0 0 chrX 3748112 3748158 -18674669 + GA-rich Low_complexity Low_complexity 4 49 0 1 613 189 107 0 0 chrX 3748589 3748617 -18674210 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1 613 223 221 25 25 chrX 3749652 3749731 -18673096 + (CAG)n Simple_repeat Simple_repeat 1 79 0 1 613 437 147 0 0 chrX 3749802 3749904 -18672923 + ROO_I LTR Pao 641 742 -7514 1 613 234 91 0 0 chrX 3750066 3750099 -18672728 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 613 28 48 0 0 chrX 3751353 3751395 -18671432 + AT_rich Low_complexity Low_complexity 1 42 0 1 613 1545 297 17 20 chrX 3751689 3752594 -18670233 + SAR_DM Satellite Satellite 1 902 -396 1 613 419 230 0 0 chrX 3752594 3752681 -18670146 - BS2 LINE Jockey -196 4525 4439 1 613 201 121 0 0 chrX 3753109 3753142 -18669685 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 1 613 34 24 0 0 chrX 3754041 3754082 -18668745 + AT_rich Low_complexity Low_complexity 1 41 0 1 613 26 30 0 0 chrX 3756378 3756411 -18666416 + AT_rich Low_complexity Low_complexity 1 33 0 1 613 21 36 0 0 chrX 3756959 3756987 -18665840 + AT_rich Low_complexity Low_complexity 1 28 0 1 613 23 33 0 0 chrX 3759854 3759884 -18662943 + AT_rich Low_complexity Low_complexity 1 30 0 1 613 23 33 0 0 chrX 3763858 3763888 -18658939 + AT_rich Low_complexity Low_complexity 1 30 0 1 613 28 29 0 0 chrX 3763903 3763938 -18658889 + AT_rich Low_complexity Low_complexity 1 35 0 1 613 287 302 53 57 chrX 3764960 3765206 -18657621 - SAR_DM Satellite Satellite -720 752 508 1 613 297 338 48 34 chrX 3765002 3765210 -18657617 + XDMR Unknown Unknown 4 214 -147 1 613 21 0 0 0 chrX 3765239 3765260 -18657567 + AT_rich Low_complexity Low_complexity 1 21 0 1 613 243 0 0 0 chrX 3768617 3768644 -18654183 + (CAAT)n Simple_repeat Simple_repeat 3 29 0 1 613 245 204 19 0 chrX 3772684 3772738 -18650089 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 1 613 234 293 0 0 chrX 3778040 3778098 -18644729 + (ACCG)n Simple_repeat Simple_repeat 2 59 0 1 613 26 0 0 0 chrX 3778326 3778352 -18644475 + AT_rich Low_complexity Low_complexity 1 26 0 1 613 23 33 0 0 chrX 3779221 3779251 -18643576 + AT_rich Low_complexity Low_complexity 1 30 0 1 613 201 132 0 0 chrX 3779542 3779580 -18643247 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1 613 183 167 0 0 chrX 3779687 3779729 -18643098 + A-rich Low_complexity Low_complexity 2 43 0 1 613 204 237 0 0 chrX 3779766 3779804 -18643023 + (CATA)n Simple_repeat Simple_repeat 3 40 0 1 613 195 69 0 0 chrX 3780892 3780921 -18641906 + (GAATG)n Simple_repeat Simple_repeat 1 29 0 1 613 373 291 0 0 chrX 3783728 3783838 -18638989 + (CGA)n Simple_repeat Simple_repeat 2 111 0 1 613 294 238 0 0 chrX 3784049 3784129 -18638698 + (CTG)n Simple_repeat Simple_repeat 3 82 0 1 613 22 0 0 0 chrX 3784470 3784492 -18638335 + AT_rich Low_complexity Low_complexity 1 22 0 1 613 432 82 0 0 chrX 3785787 3785848 -18636979 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 613 180 77 0 0 chrX 3786023 3786049 -18636778 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 1 613 225 153 42 0 chrX 3786324 3786396 -18636431 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 613 189 74 0 0 chrX 3787333 3787360 -18635467 + (T)n Simple_repeat Simple_repeat 1 27 0 1 613 429 81 0 0 chrX 3793676 3793738 -18629089 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 613 197 65 0 31 chrX 3797325 3797357 -18625470 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 613 231 232 0 0 chrX 3798242 3798298 -18624529 - ROO_I LTR Pao -7557 699 644 1 613 687 131 0 0 chrX 3800369 3800506 -18622321 + (CTG)n Simple_repeat Simple_repeat 2 138 0 1 613 201 39 0 0 chrX 3800999 3801025 -18621802 + (CTG)n Simple_repeat Simple_repeat 2 27 0 1 614 348 64 0 0 chrX 3805352 3805399 -18617428 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 614 237 283 0 61 chrX 3805831 3805929 -18616898 + T-rich Low_complexity Low_complexity 1 92 0 1 614 22 70 0 0 chrX 3806027 3806070 -18616757 + AT_rich Low_complexity Low_complexity 1 43 0 1 614 229 216 0 0 chrX 3807722 3807773 -18615054 + T-rich Low_complexity Low_complexity 1 51 0 1 614 200 61 0 57 chrX 3808404 3808439 -18614388 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 1 614 330 138 0 0 chrX 3812414 3812472 -18610355 + (TAGTG)n Simple_repeat Simple_repeat 2 59 0 1 614 23 0 0 0 chrX 3813247 3813270 -18609557 + AT_rich Low_complexity Low_complexity 1 23 0 1 614 180 0 0 0 chrX 3818231 3818251 -18604576 + (ACTCG)n Simple_repeat Simple_repeat 2 21 0 1 614 216 86 0 0 chrX 3818824 3818859 -18603968 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 614 216 0 0 0 chrX 3821081 3821105 -18601722 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 614 191 88 29 0 chrX 3821291 3821325 -18601502 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 614 246 321 12 23 chrX 3823477 3823563 -18599264 + (CAA)n Simple_repeat Simple_repeat 3 87 0 1 614 24 0 0 0 chrX 3823866 3823890 -18598937 + AT_rich Low_complexity Low_complexity 1 24 0 1 614 573 167 79 79 chrX 3834059 3834248 -18588579 + Gypsy8_LTR LTR Gypsy 1 189 -115 1 614 355 192 14 0 chrX 3834260 3834333 -18588494 + Gypsy8_I LTR Gypsy 6 79 -4268 1 614 21 36 0 0 chrX 3838256 3838284 -18584543 + AT_rich Low_complexity Low_complexity 1 28 0 1 614 22 35 0 0 chrX 3838535 3838564 -18584263 + AT_rich Low_complexity Low_complexity 1 29 0 1 614 21 36 0 0 chrX 3838682 3838710 -18584117 + AT_rich Low_complexity Low_complexity 1 28 0 1 614 21 36 0 0 chrX 3842451 3842479 -18580348 + AT_rich Low_complexity Low_complexity 1 28 0 1 614 22 35 0 0 chrX 3842730 3842759 -18580068 + AT_rich Low_complexity Low_complexity 1 29 0 1 614 234 176 0 0 chrX 3843616 3843667 -18579160 + (CAA)n Simple_repeat Simple_repeat 1 51 0 1 614 186 43 0 0 chrX 3844028 3844051 -18578776 + (T)n Simple_repeat Simple_repeat 1 23 0 1 614 269 177 0 103 chrX 3846996 3847103 -18575724 + ROO_I LTR Pao 641 736 -7520 1 614 243 79 0 0 chrX 3847580 3847618 -18575209 + (A)n Simple_repeat Simple_repeat 1 38 0 1 614 296 64 21 0 chrX 3848398 3848445 -18574382 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 614 241 265 23 57 chrX 3848968 3849144 -18573683 + A-rich Low_complexity Low_complexity 4 173 0 1 614 226 250 0 0 chrX 3850093 3850153 -18572674 - ROO_I LTR Pao -7532 724 665 1 614 216 67 0 0 chrX 3853277 3853307 -18569520 + (CTG)n Simple_repeat Simple_repeat 3 32 0 1 614 194 109 43 0 chrX 3858846 3858892 -18563935 + A-rich Low_complexity Low_complexity 1 48 0 1 614 198 176 0 0 chrX 3859131 3859182 -18563645 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 614 225 0 0 0 chrX 3862788 3862813 -18560014 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 614 21 0 0 0 chrX 3866140 3866161 -18556666 + AT_rich Low_complexity Low_complexity 1 21 0 1 614 22 0 0 0 chrX 3867690 3867712 -18555115 + AT_rich Low_complexity Low_complexity 1 22 0 1 614 26 0 0 0 chrX 3871210 3871236 -18551591 + AT_rich Low_complexity Low_complexity 1 26 0 1 614 195 114 0 0 chrX 3871559 3871594 -18551233 + (T)n Simple_repeat Simple_repeat 1 35 0 1 614 216 0 0 0 chrX 3873505 3873529 -18549298 + (T)n Simple_repeat Simple_repeat 1 24 0 1 614 282 246 0 0 chrX 3874398 3874463 -18548364 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 614 201 154 0 0 chrX 3874838 3874877 -18547950 + (TAGTG)n Simple_repeat Simple_repeat 1 39 0 1 614 297 128 0 0 chrX 3874942 3874989 -18547838 + (TCCG)n Simple_repeat Simple_repeat 3 49 0 1 614 55 40 0 0 chrX 3875310 3875386 -18547441 + AT_rich Low_complexity Low_complexity 1 76 0 1 614 189 0 0 0 chrX 3876108 3876129 -18546698 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 614 192 40 0 0 chrX 3876664 3876689 -18546138 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 614 188 170 0 19 chrX 3877169 3877223 -18545604 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 614 198 0 0 0 chrX 3877468 3877490 -18545337 + (CAT)n Simple_repeat Simple_repeat 1 22 0 1 614 183 129 0 0 chrX 3880754 3880785 -18542042 + (T)n Simple_repeat Simple_repeat 1 31 0 1 614 201 39 0 0 chrX 3880837 3880863 -18541964 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 614 4195 8 0 64 chrX 3880950 3881464 -18541363 - T412LTR LTR LTR 0 481 1 1 614 61748 2 0 11 chrX 3881354 3888326 -18534501 - DM412 LTR Gypsy 0 6897 1 1 614 4195 8 0 64 chrX 3888012 3888526 -18534301 - T412LTR LTR LTR 0 481 1 1 614 237 128 0 0 chrX 3888944 3888991 -18533836 + (A)n Simple_repeat Simple_repeat 1 47 0 1 614 180 77 0 0 chrX 3890109 3890135 -18532692 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 614 246 143 0 0 chrX 3891789 3891838 -18530989 + (CATCC)n Simple_repeat Simple_repeat 1 49 0 1 614 37 39 0 0 chrX 3892923 3892974 -18529853 + AT_rich Low_complexity Low_complexity 1 51 0 1 614 301 75 0 36 chrX 3894234 3894289 -18528538 + (CAAAC)n Simple_repeat Simple_repeat 3 55 0 1 614 186 167 0 0 chrX 3898113 3898149 -18524678 + A-rich Low_complexity Low_complexity 1 36 0 1 614 186 191 0 0 chrX 3898200 3898242 -18524585 + A-rich Low_complexity Low_complexity 2 43 0 1 614 212 263 0 50 chrX 3898332 3898412 -18524415 + T-rich Low_complexity Low_complexity 5 80 0 1 614 249 167 0 0 chrX 3901885 3901939 -18520888 + GA-rich Low_complexity Low_complexity 2 55 0 1 614 244 287 21 0 chrX 3904197 3904291 -18518536 + (CAA)n Simple_repeat Simple_repeat 2 97 0 1 614 306 106 0 0 chrX 3905739 3905786 -18517041 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 614 195 42 0 0 chrX 3905889 3905913 -18516914 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 614 21 57 0 0 chrX 3907112 3907147 -18515680 + AT_rich Low_complexity Low_complexity 1 35 0 1 614 249 33 0 0 chrX 3908080 3908110 -18514717 + (TCG)n Simple_repeat Simple_repeat 2 31 0 1 614 315 85 0 0 chrX 3910979 3911026 -18511801 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 614 34 24 0 0 chrX 3911206 3911247 -18511580 + AT_rich Low_complexity Low_complexity 1 41 0 1 614 183 42 0 0 chrX 3911443 3911467 -18511360 + (C)n Simple_repeat Simple_repeat 1 24 0 1 614 216 0 0 0 chrX 3911627 3911651 -18511176 + (CACAG)n Simple_repeat Simple_repeat 1 24 0 1 614 350 57 0 19 chrX 3913470 3913524 -18509303 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 614 180 0 0 0 chrX 3914856 3914876 -18507951 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 614 22 70 0 0 chrX 3915263 3915306 -18507521 + AT_rich Low_complexity Low_complexity 1 43 0 1 614 189 74 0 0 chrX 3915523 3915550 -18507277 + (T)n Simple_repeat Simple_repeat 1 27 0 1 614 28 29 0 0 chrX 3916629 3916664 -18506163 + AT_rich Low_complexity Low_complexity 1 35 0 1 614 188 167 21 0 chrX 3918643 3918691 -18504136 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 614 29 28 0 0 chrX 3921028 3921064 -18501763 + AT_rich Low_complexity Low_complexity 1 36 0 1 614 208 143 0 0 chrX 3922219 3922254 -18500573 + (GAA)n Simple_repeat Simple_repeat 3 37 0 1 614 209 189 0 0 chrX 3922361 3922398 -18500429 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1 614 24 0 0 0 chrX 3923052 3923076 -18499751 + AT_rich Low_complexity Low_complexity 1 24 0 1 614 183 42 0 0 chrX 3923226 3923250 -18499577 + (TCG)n Simple_repeat Simple_repeat 2 25 0 1 614 24 0 0 0 chrX 3923345 3923369 -18499458 + AT_rich Low_complexity Low_complexity 1 24 0 1 614 202 205 0 0 chrX 3924389 3924428 -18498399 + T-rich Low_complexity Low_complexity 1 39 0 1 614 279 0 0 0 chrX 3925270 3925301 -18497526 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 614 318 87 0 0 chrX 3925694 3925740 -18497087 + (ATG)n Simple_repeat Simple_repeat 3 48 0 1 614 303 104 0 0 chrX 3926910 3926958 -18495869 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 614 24 0 0 0 chrX 3927191 3927215 -18495612 + AT_rich Low_complexity Low_complexity 1 24 0 1 614 192 97 0 0 chrX 3929313 3929344 -18493483 + (T)n Simple_repeat Simple_repeat 1 31 0 1 614 200 222 0 0 chrX 3931890 3931935 -18490892 + T-rich Low_complexity Low_complexity 1 45 0 1 615 306 50 0 0 chrX 3932678 3932718 -18490109 + (GAGTG)n Simple_repeat Simple_repeat 5 44 0 1 615 465 50 0 0 chrX 3933128 3933188 -18489639 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 615 192 77 0 0 chrX 3933424 3933450 -18489377 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 615 198 0 0 0 chrX 3934034 3934056 -18488771 + (CTA)n Simple_repeat Simple_repeat 2 23 0 1 615 220 324 0 0 chrX 3934143 3934228 -18488599 + (AACTG)n Simple_repeat Simple_repeat 1 85 0 1 615 402 85 0 0 chrX 3936020 3936079 -18486748 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 615 246 32 0 0 chrX 3936268 3936299 -18486528 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 615 24 0 0 0 chrX 3936691 3936715 -18486112 + AT_rich Low_complexity Low_complexity 1 24 0 1 615 235 160 13 13 chrX 3938481 3938557 -18484270 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 615 213 108 0 0 chrX 3938871 3938908 -18483919 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 615 237 132 41 68 chrX 3939787 3939860 -18482967 + (CAGGA)n Simple_repeat Simple_repeat 2 72 0 1 615 189 0 0 0 chrX 3940246 3940267 -18482560 + (A)n Simple_repeat Simple_repeat 1 21 0 1 615 23 0 0 0 chrX 3940377 3940400 -18482427 + AT_rich Low_complexity Low_complexity 1 23 0 1 615 315 85 0 0 chrX 3941242 3941289 -18481538 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 615 189 121 0 0 chrX 3941889 3941922 -18480905 + (T)n Simple_repeat Simple_repeat 1 33 0 1 615 210 71 0 0 chrX 3942063 3942091 -18480736 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1 615 264 111 0 0 chrX 3942347 3942392 -18480435 + (TCCA)n Simple_repeat Simple_repeat 3 47 0 1 615 261 0 0 0 chrX 3943892 3943921 -18478906 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 615 201 74 0 0 chrX 3944684 3944711 -18478116 + (CCCCAG)n Simple_repeat Simple_repeat 5 31 0 1 615 213 65 0 0 chrX 3945369 3945400 -18477427 + (T)n Simple_repeat Simple_repeat 1 31 0 1 615 195 42 0 0 chrX 3945984 3946008 -18476819 + (CGAAA)n Simple_repeat Simple_repeat 3 26 0 1 615 205 186 0 0 chrX 3950724 3950767 -18472060 + A-rich Low_complexity Low_complexity 1 43 0 1 615 21 57 0 0 chrX 3951728 3951763 -18471064 + AT_rich Low_complexity Low_complexity 1 35 0 1 615 240 280 0 0 chrX 3955217 3955292 -18467535 + A-rich Low_complexity Low_complexity 1 75 0 1 615 183 42 0 0 chrX 3955464 3955488 -18467339 + (T)n Simple_repeat Simple_repeat 1 24 0 1 615 25 0 0 0 chrX 3958310 3958335 -18464492 + AT_rich Low_complexity Low_complexity 1 25 0 1 615 27 49 0 0 chrX 3958650 3958691 -18464136 + AT_rich Low_complexity Low_complexity 1 41 0 1 615 203 158 0 0 chrX 3959379 3959417 -18463410 + (CAACC)n Simple_repeat Simple_repeat 2 39 0 1 615 189 74 0 0 chrX 3960017 3960044 -18462783 + (A)n Simple_repeat Simple_repeat 1 27 0 1 615 309 82 0 0 chrX 3960677 3960726 -18462101 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 1 615 29 0 0 0 chrX 3961197 3961226 -18461601 + AT_rich Low_complexity Low_complexity 1 29 0 1 615 186 43 0 0 chrX 3962019 3962042 -18460785 + (TCCTG)n Simple_repeat Simple_repeat 3 25 0 1 615 22 0 0 0 chrX 3962119 3962141 -18460686 + AT_rich Low_complexity Low_complexity 1 22 0 1 615 180 0 0 0 chrX 3963295 3963315 -18459512 + (CAATA)n Simple_repeat Simple_repeat 3 22 0 1 615 1550 270 34 25 chrX 3964697 3965408 -18457419 - SAR_DM Satellite Satellite -547 925 209 1 615 325 308 25 25 chrX 3965260 3965460 -18457367 + XDMR Unknown Unknown 1 200 -161 1 615 213 242 15 15 chrX 3968567 3968634 -18454193 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 615 182 91 30 0 chrX 3970707 3970740 -18452087 + (TTAAA)n Simple_repeat Simple_repeat 1 34 0 1 615 213 139 0 0 chrX 3970914 3970957 -18451870 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 615 246 228 0 37 chrX 3971028 3971110 -18451717 + A-rich Low_complexity Low_complexity 4 82 0 1 615 480 111 0 0 chrX 3972085 3972157 -18450670 + (CAA)n Simple_repeat Simple_repeat 1 72 0 1 615 232 143 0 0 chrX 3972827 3972876 -18449951 + ROO_I LTR Pao 695 743 -7513 1 615 369 86 0 0 chrX 3973675 3973733 -18449094 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 615 207 0 0 0 chrX 3974843 3974866 -18447961 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 615 276 120 0 0 chrX 3975131 3975181 -18447646 + (CTG)n Simple_repeat Simple_repeat 2 51 0 1 615 258 106 0 86 chrX 3975685 3975778 -18447049 + (TCTCTG)n Simple_repeat Simple_repeat 5 89 0 1 615 309 89 0 0 chrX 3976335 3976380 -18446447 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 1 615 26 0 0 0 chrX 3977047 3977073 -18445754 + GC_rich Low_complexity Low_complexity 1 26 0 1 615 504 117 0 0 chrX 3977230 3977307 -18445520 + (CAG)n Simple_repeat Simple_repeat 1 77 0 1 615 261 83 0 0 chrX 3977386 3977422 -18445405 + (CAG)n Simple_repeat Simple_repeat 1 36 0 1 615 213 259 0 0 chrX 3977727 3977781 -18445046 + (CGG)n Simple_repeat Simple_repeat 2 55 0 1 615 357 186 0 0 chrX 3978025 3978122 -18444705 + ROO_I LTR Pao 647 743 -7513 1 615 192 77 0 0 chrX 3980591 3980617 -18442210 + (A)n Simple_repeat Simple_repeat 1 26 0 1 615 216 0 0 0 chrX 3981165 3981189 -18441638 + (CGAAT)n Simple_repeat Simple_repeat 1 24 0 1 615 266 261 0 0 chrX 3982128 3982193 -18440634 + ROO_I LTR Pao 665 729 -7527 1 615 210 91 0 0 chrX 3982684 3982717 -18440110 + (A)n Simple_repeat Simple_repeat 1 33 0 1 615 228 184 0 20 chrX 3982728 3982778 -18440049 + (TAAAG)n Simple_repeat Simple_repeat 5 53 0 1 615 213 65 0 0 chrX 3983594 3983625 -18439202 + (T)n Simple_repeat Simple_repeat 1 31 0 1 615 21 0 0 0 chrX 3986085 3986106 -18436721 + AT_rich Low_complexity Low_complexity 1 21 0 1 615 35 24 0 0 chrX 3986251 3986293 -18436534 + AT_rich Low_complexity Low_complexity 1 42 0 1 615 28 0 0 0 chrX 3986467 3986495 -18436332 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 21 36 0 0 chrX 3986515 3986543 -18436284 + AT_rich Low_complexity Low_complexity 1 28 0 1 615 213 108 0 0 chrX 3986665 3986702 -18436125 + (T)n Simple_repeat Simple_repeat 1 37 0 1 615 224 213 0 0 chrX 3987432 3987479 -18435348 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 615 189 107 0 0 chrX 3988247 3988275 -18434552 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 615 298 129 0 31 chrX 3988973 3989037 -18433790 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 615 250 176 0 23 chrX 3989113 3989200 -18433627 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 615 30 27 0 0 chrX 3989840 3989877 -18432950 + AT_rich Low_complexity Low_complexity 1 37 0 1 615 225 0 0 0 chrX 3990846 3990871 -18431956 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 615 501 33 0 0 chrX 4005142 4005202 -18417625 + PROTOP_B DNA P 1 60 -1093 1 615 22 56 0 0 chrX 4008069 4008105 -18414722 + AT_rich Low_complexity Low_complexity 1 36 0 1 615 183 42 0 0 chrX 4011749 4011773 -18411054 + (A)n Simple_repeat Simple_repeat 1 24 0 1 615 27 0 0 0 chrX 4013572 4013599 -18409228 + AT_rich Low_complexity Low_complexity 1 27 0 1 615 180 176 0 0 chrX 4014790 4014824 -18408003 + (CGG)n Simple_repeat Simple_repeat 1 34 0 1 615 195 42 0 0 chrX 4014875 4014899 -18407928 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 615 279 133 0 0 chrX 4017371 4017416 -18405411 + (CACCAT)n Simple_repeat Simple_repeat 1 45 0 1 615 222 174 0 0 chrX 4019637 4019683 -18403144 + (CGA)n Simple_repeat Simple_repeat 3 48 0 1 615 240 143 0 0 chrX 4020923 4020965 -18401862 + (CAGAA)n Simple_repeat Simple_repeat 4 45 0 1 615 2285 59 86 0 chrX 4022208 4022512 -18400315 - DNAREP1_DM LINE Penelope 0 594 265 1 615 762 65 0 0 chrX 4022516 4022609 -18400218 - DNAREP1_DM LINE Penelope -501 93 1 1 615 22 35 0 0 chrX 4023679 4023708 -18399119 + AT_rich Low_complexity Low_complexity 1 29 0 1 615 21 82 0 0 chrX 4026384 4026433 -18396394 + AT_rich Low_complexity Low_complexity 1 49 0 1 615 215 191 11 0 chrX 4027426 4027482 -18395345 + T-rich Low_complexity Low_complexity 1 56 0 1 615 22 35 0 0 chrX 4027529 4027558 -18395269 + AT_rich Low_complexity Low_complexity 1 29 0 1 615 342 108 13 26 chrX 4029602 4029678 -18393149 + (GTTTG)n Simple_repeat Simple_repeat 5 79 0 1 615 215 228 0 0 chrX 4033059 4033116 -18389711 + T-rich Low_complexity Low_complexity 1 57 0 1 615 26 0 0 0 chrX 4034496 4034522 -18388305 + AT_rich Low_complexity Low_complexity 1 26 0 1 615 246 32 0 0 chrX 4035217 4035248 -18387579 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 615 393 129 0 0 chrX 4035641 4035711 -18387116 + (TTG)n Simple_repeat Simple_repeat 3 72 0 1 615 180 0 0 0 chrX 4039155 4039175 -18383652 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 615 242 194 0 31 chrX 4039253 4039317 -18383510 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 615 300 111 0 0 chrX 4039714 4039768 -18383059 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 615 23 0 0 0 chrX 4040275 4040298 -18382529 + AT_rich Low_complexity Low_complexity 1 23 0 1 615 189 0 0 0 chrX 4042513 4042534 -18380293 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 615 273 29 0 0 chrX 4043751 4043785 -18379042 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1 615 226 214 0 0 chrX 4043903 4043945 -18378882 + (CATA)n Simple_repeat Simple_repeat 1 42 0 1 615 180 0 0 0 chrX 4044504 4044524 -18378303 + (A)n Simple_repeat Simple_repeat 1 20 0 1 615 228 35 0 0 chrX 4046440 4046469 -18376358 + (CAAAC)n Simple_repeat Simple_repeat 5 33 0 1 615 23 0 0 0 chrX 4049060 4049083 -18373744 + AT_rich Low_complexity Low_complexity 1 23 0 1 615 27 0 0 0 chrX 4051567 4051594 -18371233 + AT_rich Low_complexity Low_complexity 1 27 0 1 615 3605 5 7 7 chrX 4051979 4052393 -18370434 + DM297_LTR LTR Gypsy 1 414 0 1 615 43730 7 1 0 chrX 4052393 4058543 -18364284 + DM297_I LTR Gypsy 1 6167 0 1 615 3614 5 7 7 chrX 4058543 4058957 -18363870 + DM297_LTR LTR Gypsy 1 414 0 1 616 180 135 0 0 chrX 4067270 4067307 -18355520 + (A)n Simple_repeat Simple_repeat 1 37 0 1 616 291 286 11 0 chrX 4067698 4067789 -18355038 + (CTG)n Simple_repeat Simple_repeat 1 92 0 1 616 189 94 0 0 chrX 4070220 4070252 -18352575 + (T)n Simple_repeat Simple_repeat 1 32 0 1 616 568 280 65 47 chrX 4071208 4071651 -18351176 - SAR_DM Satellite Satellite -456 1016 566 1 616 429 219 52 52 chrX 4071506 4071679 -18351148 + XDMR Unknown Unknown 4 176 -185 1 616 21 0 0 0 chrX 4072158 4072179 -18350648 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 26 0 0 0 chrX 4073269 4073295 -18349532 + AT_rich Low_complexity Low_complexity 1 26 0 1 616 21 0 0 0 chrX 4074190 4074211 -18348616 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 243 103 0 0 chrX 4075065 4075104 -18347723 + (CCA)n Simple_repeat Simple_repeat 3 41 0 1 616 24 0 0 0 chrX 4077015 4077039 -18345788 + AT_rich Low_complexity Low_complexity 1 24 0 1 616 249 167 0 0 chrX 4080249 4080303 -18342524 + (CGAAT)n Simple_repeat Simple_repeat 5 58 0 1 616 267 79 0 0 chrX 4080801 4080839 -18341988 + (TTGG)n Simple_repeat Simple_repeat 4 41 0 1 616 198 0 0 0 chrX 4080854 4080876 -18341951 + (CATCT)n Simple_repeat Simple_repeat 5 26 0 1 616 198 0 0 0 chrX 4082395 4082417 -18340410 + (A)n Simple_repeat Simple_repeat 1 22 0 1 616 23 0 0 0 chrX 4082493 4082516 -18340311 + AT_rich Low_complexity Low_complexity 1 23 0 1 616 336 152 0 0 chrX 4083359 4083425 -18339402 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 616 270 0 0 0 chrX 4084270 4084300 -18338527 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 616 324 127 0 0 chrX 4084684 4084739 -18338088 + (T)n Simple_repeat Simple_repeat 1 55 0 1 616 234 62 0 0 chrX 4085854 4085886 -18336941 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 616 270 0 0 0 chrX 4089393 4089423 -18333404 + (CAGT)n Simple_repeat Simple_repeat 4 33 0 1 616 214 143 20 20 chrX 4091350 4091400 -18331427 + (CCCCAA)n Simple_repeat Simple_repeat 4 53 0 1 616 219 36 0 0 chrX 4093047 4093075 -18329752 + (CAAAC)n Simple_repeat Simple_repeat 4 31 0 1 616 186 43 0 0 chrX 4094854 4094877 -18327950 + (A)n Simple_repeat Simple_repeat 1 23 0 1 616 186 143 0 0 chrX 4098161 4098196 -18324631 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 616 22 0 0 0 chrX 4099909 4099931 -18322896 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 24 32 0 0 chrX 4101749 4101780 -18321047 + AT_rich Low_complexity Low_complexity 1 31 0 1 616 216 0 0 0 chrX 4102091 4102115 -18320712 + (T)n Simple_repeat Simple_repeat 1 24 0 1 616 236 295 0 25 chrX 4105329 4105409 -18317418 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 1 616 201 121 0 0 chrX 4109035 4109068 -18313759 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 1 616 189 159 0 0 chrX 4109675 4109719 -18313108 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 616 195 222 0 0 chrX 4110392 4110437 -18312390 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 1 616 273 265 60 0 chrX 4116928 4117094 -18305733 + (CCAA)n Simple_repeat Simple_repeat 3 178 0 1 616 216 0 0 0 chrX 4120494 4120518 -18302309 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 616 222 143 71 0 chrX 4120583 4120625 -18302202 + (TTCTG)n Simple_repeat Simple_repeat 3 47 0 1 616 225 0 0 0 chrX 4120795 4120820 -18302007 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 616 22 35 0 0 chrX 4121868 4121897 -18300930 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 24 0 0 0 chrX 4124152 4124176 -18298651 + AT_rich Low_complexity Low_complexity 1 24 0 1 616 343 273 36 63 chrX 4125095 4125318 -18297509 + XDMR Unknown Unknown 123 339 -22 1 616 534 307 33 43 chrX 4125145 4125660 -18297167 - SAR_DM Satellite Satellite -563 509 1 1 616 180 0 0 0 chrX 4126529 4126549 -18296278 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 616 21 36 0 0 chrX 4128461 4128489 -18294338 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 867 46 0 0 chrX 4129796 4129904 -18292923 + (TA)n Simple_repeat Simple_repeat 2 109 0 1 616 247 172 0 49 chrX 4131796 4131857 -18290970 + (CCCCAA)n Simple_repeat Simple_repeat 4 61 0 1 616 204 229 0 0 chrX 4132648 4132696 -18290131 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1 616 21 0 0 0 chrX 4133133 4133154 -18289673 + AT_rich Low_complexity Low_complexity 1 21 0 1 616 183 80 0 0 chrX 4133531 4133556 -18289271 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 616 28 48 0 0 chrX 4135941 4135983 -18286844 + AT_rich Low_complexity Low_complexity 1 42 0 1 616 216 296 0 36 chrX 4136407 4136491 -18286336 + CT-rich Low_complexity Low_complexity 2 82 0 1 616 201 242 0 0 chrX 4138573 4138635 -18284192 + (TTG)n Simple_repeat Simple_repeat 2 63 0 1 616 440 243 0 33 chrX 4138703 4138886 -18283941 + (TTG)n Simple_repeat Simple_repeat 3 179 0 1 616 362 258 5 38 chrX 4138970 4139155 -18283672 + (TTG)n Simple_repeat Simple_repeat 1 179 0 1 616 23 33 0 0 chrX 4140547 4140577 -18282250 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 21 36 0 0 chrX 4142173 4142201 -18280626 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 201 94 0 0 chrX 4144686 4144718 -18278109 + (GTCTG)n Simple_repeat Simple_repeat 4 35 0 1 616 234 176 0 0 chrX 4144899 4144950 -18277877 + (CAGT)n Simple_repeat Simple_repeat 4 54 0 1 616 22 0 0 0 chrX 4147931 4147953 -18274874 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 22 0 0 0 chrX 4151155 4151177 -18271650 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 22 70 0 0 chrX 4153753 4153796 -18269031 + AT_rich Low_complexity Low_complexity 1 43 0 1 616 234 62 0 0 chrX 4156111 4156143 -18266684 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 1 616 297 0 0 0 chrX 4156709 4156742 -18266085 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 616 283 149 13 13 chrX 4158734 4158809 -18264018 + (TTGG)n Simple_repeat Simple_repeat 4 78 0 1 616 22 35 0 0 chrX 4159096 4159125 -18263702 + AT_rich Low_complexity Low_complexity 1 29 0 1 616 22 0 0 0 chrX 4159174 4159196 -18263631 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 198 0 0 0 chrX 4161962 4161984 -18260843 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 616 188 160 0 57 chrX 4163703 4163756 -18259071 + GA-rich Low_complexity Low_complexity 3 52 0 1 616 220 224 15 15 chrX 4165246 4165314 -18257513 + (CAGT)n Simple_repeat Simple_repeat 4 71 0 1 616 255 189 0 0 chrX 4167707 4167760 -18255067 + (GAATG)n Simple_repeat Simple_repeat 5 57 0 1 616 192 77 0 0 chrX 4168912 4168938 -18253889 + (GAGTG)n Simple_repeat Simple_repeat 1 26 0 1 616 27 0 0 0 chrX 4169627 4169654 -18253173 + AT_rich Low_complexity Low_complexity 1 27 0 1 616 219 150 0 0 chrX 4171901 4171941 -18250886 + (T)n Simple_repeat Simple_repeat 1 40 0 1 616 261 313 0 10 chrX 4175500 4175600 -18247227 + (TA)n Simple_repeat Simple_repeat 2 100 0 1 616 2442 0 0 0 chrX 4178547 4178823 -18244004 - Copia_LTR LTR Copia 0 276 1 1 616 41732 0 0 0 chrX 4178823 4183416 -18239411 - Copia_I LTR Copia 0 4593 1 1 616 2442 0 0 0 chrX 4183416 4183692 -18239135 - Copia_LTR LTR Copia 0 276 1 1 616 204 40 0 0 chrX 4190499 4190524 -18232303 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1 616 40 0 0 0 chrX 4190862 4190902 -18231925 + AT_rich Low_complexity Low_complexity 1 40 0 1 616 208 250 0 0 chrX 4191151 4191207 -18231620 + T-rich Low_complexity Low_complexity 1 56 0 1 616 183 129 0 0 chrX 4191374 4191405 -18231422 + (A)n Simple_repeat Simple_repeat 1 31 0 1 616 243 0 0 0 chrX 4191664 4191691 -18231136 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 616 204 40 0 0 chrX 4191721 4191746 -18231081 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 616 226 227 0 0 chrX 4192222 4192266 -18230561 + (TATG)n Simple_repeat Simple_repeat 2 45 0 1 616 204 40 0 0 chrX 4193649 4193674 -18229153 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 617 32 26 0 0 chrX 4196492 4196531 -18226296 + AT_rich Low_complexity Low_complexity 1 39 0 1 617 37 0 0 0 chrX 4197352 4197389 -18225438 + AT_rich Low_complexity Low_complexity 1 37 0 1 617 234 0 0 0 chrX 4197591 4197617 -18225210 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 617 213 94 0 0 chrX 4198129 4198161 -18224666 + (GGAGAA)n Simple_repeat Simple_repeat 6 37 0 1 617 222 37 0 0 chrX 4200027 4200054 -18222773 + (CGGA)n Simple_repeat Simple_repeat 3 29 0 1 617 218 259 0 0 chrX 4200615 4200673 -18222154 + GA-rich Low_complexity Low_complexity 1 58 0 1 617 240 35 0 0 chrX 4201785 4201814 -18221013 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 617 203 61 0 29 chrX 4202479 4202513 -18220314 + (CAAAG)n Simple_repeat Simple_repeat 2 34 0 1 617 21 0 0 0 chrX 4202785 4202806 -18220021 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 198 0 0 0 chrX 4205374 4205396 -18217431 + (T)n Simple_repeat Simple_repeat 1 22 0 1 617 194 150 0 24 chrX 4206616 4206657 -18216170 + (CATA)n Simple_repeat Simple_repeat 2 41 0 1 617 204 111 0 0 chrX 4207098 4207134 -18215693 + (A)n Simple_repeat Simple_repeat 1 36 0 1 617 198 0 0 0 chrX 4207449 4207471 -18215356 + (C)n Simple_repeat Simple_repeat 1 22 0 1 617 23 33 0 0 chrX 4216340 4216370 -18206457 + AT_rich Low_complexity Low_complexity 1 30 0 1 617 23 33 0 0 chrX 4217874 4217904 -18204923 + AT_rich Low_complexity Low_complexity 1 30 0 1 617 207 219 0 59 chrX 4219548 4219616 -18203211 + A-rich Low_complexity Low_complexity 3 66 0 1 617 242 56 28 0 chrX 4220366 4220402 -18202425 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1 617 513 212 41 41 chrX 4222658 4222830 -18199997 - XDMR Unknown Unknown -189 172 1 1 617 980 251 18 21 chrX 4222721 4223054 -18199773 + SAR_DM Satellite Satellite 604 935 -537 1 617 189 180 0 0 chrX 4224854 4224904 -18197923 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 617 186 43 0 0 chrX 4225398 4225421 -18197406 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1 617 213 39 0 0 chrX 4226054 4226080 -18196747 + (TCG)n Simple_repeat Simple_repeat 1 26 0 1 617 192 97 0 0 chrX 4226527 4226558 -18196269 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 617 228 111 0 0 chrX 4226652 4226688 -18196139 + (TTTTC)n Simple_repeat Simple_repeat 3 38 0 1 617 22 0 0 0 chrX 4227105 4227127 -18195700 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 275 296 0 0 chrX 4227187 4227268 -18195559 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 617 276 130 0 0 chrX 4228610 4228656 -18194171 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 617 436 155 10 30 chrX 4228904 4229004 -18193823 + Transib-N1_DM DNA Transib 21 118 -396 1 617 186 133 0 0 chrX 4229898 4229928 -18192899 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 617 186 71 0 0 chrX 4230037 4230065 -18192762 + (A)n Simple_repeat Simple_repeat 1 28 0 1 617 265 136 0 57 chrX 4232932 4233002 -18189825 + A-rich Low_complexity Low_complexity 1 66 0 1 617 207 171 0 0 chrX 4235207 4235242 -18187585 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 617 213 159 0 0 chrX 4237071 4237115 -18185712 + T-rich Low_complexity Low_complexity 5 48 0 1 617 186 43 0 0 chrX 4237367 4237390 -18185437 + (T)n Simple_repeat Simple_repeat 1 23 0 1 617 22 0 0 0 chrX 4237988 4238010 -18184817 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 207 308 12 25 chrX 4239793 4239873 -18182954 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 617 231 88 0 0 chrX 4240088 4240122 -18182705 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 617 230 0 33 0 chrX 4241239 4241269 -18181558 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 617 27 0 0 0 chrX 4241348 4241375 -18181452 + AT_rich Low_complexity Low_complexity 1 27 0 1 617 21 0 0 0 chrX 4241985 4242006 -18180821 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 288 91 0 0 chrX 4243247 4243291 -18179536 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 617 22 0 0 0 chrX 4243977 4243999 -18178828 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 210 129 47 31 chrX 4244255 4244319 -18178508 + (TTA)n Simple_repeat Simple_repeat 3 67 0 1 617 246 160 0 0 chrX 4244461 4244511 -18178316 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 617 201 195 0 0 chrX 4244865 4244906 -18177921 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 617 216 111 0 0 chrX 4246116 4246152 -18176675 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 617 204 200 0 0 chrX 4246598 4246648 -18176179 + A-rich Low_complexity Low_complexity 1 50 0 1 617 201 39 0 0 chrX 4246841 4246867 -18175960 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 617 194 156 22 0 chrX 4248362 4248407 -18174420 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1 617 203 125 0 24 chrX 4248437 4248478 -18174349 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 617 216 67 0 0 chrX 4249341 4249371 -18173456 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 617 22 35 0 0 chrX 4250766 4250795 -18172032 + AT_rich Low_complexity Low_complexity 1 29 0 1 617 261 128 0 0 chrX 4255611 4255658 -18167169 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 617 207 188 0 0 chrX 4255800 4255848 -18166979 + CT-rich Low_complexity Low_complexity 1 48 0 1 617 21 0 0 0 chrX 4256998 4257019 -18165808 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 209 196 0 0 chrX 4258408 4258459 -18164368 + T-rich Low_complexity Low_complexity 1 51 0 1 617 249 98 0 0 chrX 4258813 4258854 -18163973 + (TTA)n Simple_repeat Simple_repeat 1 41 0 1 617 22 0 0 0 chrX 4259677 4259699 -18163128 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 24 0 0 0 chrX 4263442 4263466 -18159361 + AT_rich Low_complexity Low_complexity 1 24 0 1 617 31 0 0 0 chrX 4275685 4275716 -18147111 + AT_rich Low_complexity Low_complexity 1 31 0 1 617 1160 232 12 12 chrX 4276588 4276924 -18145903 + SAR_DM Satellite Satellite 566 901 -571 1 617 239 91 0 0 chrX 4277407 4277440 -18145387 + RSP Satellite Satellite 79 111 -7 1 617 231 140 39 20 chrX 4277555 4277606 -18145221 + RSP Satellite Satellite 60 111 -7 1 617 231 140 39 20 chrX 4277886 4277937 -18144890 + RSP Satellite Satellite 60 111 -7 1 617 246 157 20 0 chrX 4278052 4278103 -18144724 + RSP Satellite Satellite 60 111 -7 1 617 246 157 20 0 chrX 4278218 4278269 -18144558 + RSP Satellite Satellite 60 111 -7 1 617 246 157 20 0 chrX 4278384 4278435 -18144392 + RSP Satellite Satellite 60 111 -7 1 617 246 157 20 0 chrX 4278549 4278600 -18144227 + RSP Satellite Satellite 60 111 -7 1 617 23 33 0 0 chrX 4279732 4279762 -18143065 + AT_rich Low_complexity Low_complexity 1 30 0 1 617 243 0 0 0 chrX 4280708 4280735 -18142092 + (CAGC)n Simple_repeat Simple_repeat 1 27 0 1 617 186 103 0 0 chrX 4281324 4281353 -18141474 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 617 215 361 0 0 chrX 4282802 4282863 -18139964 + G-rich Low_complexity Low_complexity 112 172 0 1 617 201 94 0 0 chrX 4283073 4283105 -18139722 + (A)n Simple_repeat Simple_repeat 1 32 0 1 617 237 180 0 0 chrX 4283983 4284033 -18138794 + T-rich Low_complexity Low_complexity 1 50 0 1 617 25 0 0 0 chrX 4284324 4284349 -18138478 + AT_rich Low_complexity Low_complexity 1 25 0 1 617 287 177 0 16 chrX 4287842 4287905 -18134922 + (TCTG)n Simple_repeat Simple_repeat 4 65 0 1 617 207 0 0 0 chrX 4290353 4290376 -18132451 + (A)n Simple_repeat Simple_repeat 1 23 0 1 617 189 132 0 0 chrX 4292470 4292508 -18130319 + (CAT)n Simple_repeat Simple_repeat 1 38 0 1 617 246 187 80 0 chrX 4293334 4293409 -18129418 + ROO_I LTR Pao 649 729 -7527 1 617 194 180 0 39 chrX 4293726 4293778 -18129049 + (CATA)n Simple_repeat Simple_repeat 4 53 0 1 617 363 137 0 0 chrX 4294813 4294886 -18127941 + (GGATG)n Simple_repeat Simple_repeat 2 74 0 1 617 285 75 0 0 chrX 4295355 4295395 -18127432 + (A)n Simple_repeat Simple_repeat 1 40 0 1 617 222 231 0 0 chrX 4295534 4295586 -18127241 + A-rich Low_complexity Low_complexity 1 52 0 1 617 214 186 0 0 chrX 4296119 4296162 -18126665 + T-rich Low_complexity Low_complexity 5 47 0 1 617 336 102 0 0 chrX 4297954 4298003 -18124824 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 617 213 231 0 0 chrX 4299093 4299145 -18123682 + T-rich Low_complexity Low_complexity 1 52 0 1 617 21 0 0 0 chrX 4300455 4300476 -18122351 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 22 35 0 0 chrX 4301242 4301271 -18121556 + AT_rich Low_complexity Low_complexity 1 29 0 1 617 261 0 0 0 chrX 4301517 4301546 -18121281 + (T)n Simple_repeat Simple_repeat 1 29 0 1 617 22 0 0 0 chrX 4303409 4303431 -18119396 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 21 0 0 0 chrX 4303583 4303604 -18119223 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 238 247 77 13 chrX 4303889 4303967 -18118860 - ROO_I LTR Pao -7523 733 651 1 617 27 29 0 0 chrX 4304408 4304442 -18118385 + AT_rich Low_complexity Low_complexity 1 34 0 1 617 37 0 0 0 chrX 4304965 4305002 -18117825 + AT_rich Low_complexity Low_complexity 1 37 0 1 617 231 185 37 0 chrX 4305524 4305578 -18117249 + (CTCA)n Simple_repeat Simple_repeat 2 57 0 1 617 23 54 0 0 chrX 4306005 4306042 -18116785 + AT_rich Low_complexity Low_complexity 1 37 0 1 617 180 0 0 0 chrX 4306722 4306742 -18116085 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 617 21 57 0 0 chrX 4307795 4307830 -18114997 + AT_rich Low_complexity Low_complexity 1 35 0 1 617 189 74 0 0 chrX 4308410 4308437 -18114390 + (A)n Simple_repeat Simple_repeat 1 27 0 1 617 21 0 0 0 chrX 4310600 4310621 -18112206 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 203 333 21 0 chrX 4312383 4312479 -18110348 + (CCCA)n Simple_repeat Simple_repeat 4 101 0 1 617 264 59 0 0 chrX 4312614 4312648 -18110179 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 617 22 0 0 0 chrX 4313793 4313815 -18109012 + AT_rich Low_complexity Low_complexity 1 22 0 1 617 205 255 0 0 chrX 4315975 4316026 -18106801 + GA-rich Low_complexity Low_complexity 2 52 0 1 617 217 260 13 25 chrX 4316143 4316222 -18106605 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 617 195 42 0 0 chrX 4316282 4316306 -18106521 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 617 246 125 0 0 chrX 4316339 4316387 -18106440 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 617 192 40 0 0 chrX 4316503 4316528 -18106299 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 617 22 56 0 0 chrX 4317630 4317666 -18105161 + AT_rich Low_complexity Low_complexity 1 36 0 1 617 220 326 0 14 chrX 4317870 4318016 -18104811 + (CA)n Simple_repeat Simple_repeat 1 144 0 1 617 235 211 0 0 chrX 4318042 4318094 -18104733 + GA-rich Low_complexity Low_complexity 2 53 0 1 617 21 0 0 0 chrX 4320351 4320372 -18102455 + AT_rich Low_complexity Low_complexity 1 21 0 1 617 25 31 0 0 chrX 4320570 4320602 -18102225 + AT_rich Low_complexity Low_complexity 1 32 0 1 617 180 77 0 0 chrX 4320948 4320974 -18101853 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 617 206 218 0 33 chrX 4322616 4322706 -18100121 + (CAA)n Simple_repeat Simple_repeat 1 87 0 1 617 285 259 0 0 chrX 4322757 4322888 -18099939 + (CAA)n Simple_repeat Simple_repeat 1 131 0 1 617 183 156 0 0 chrX 4322991 4323023 -18099804 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 617 225 273 0 0 chrX 4323865 4323931 -18098896 + T-rich Low_complexity Low_complexity 1 66 0 1 617 291 140 0 0 chrX 4324610 4324660 -18098167 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 617 209 213 0 0 chrX 4324884 4324931 -18097896 + A-rich Low_complexity Low_complexity 1 47 0 1 617 189 159 0 0 chrX 4325070 4325114 -18097713 + A-rich Low_complexity Low_complexity 1 44 0 1 618 213 210 0 0 chrX 4329086 4329148 -18093679 + A-rich Low_complexity Low_complexity 1 62 0 1 618 35 24 0 0 chrX 4330073 4330115 -18092712 + AT_rich Low_complexity Low_complexity 1 42 0 1 618 21 0 0 0 chrX 4330645 4330666 -18092161 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 288 77 0 0 chrX 4330876 4330915 -18091912 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 618 189 74 0 0 chrX 4332607 4332634 -18090193 + (T)n Simple_repeat Simple_repeat 1 27 0 1 618 231 255 0 0 chrX 4333271 4333322 -18089505 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 618 204 67 0 0 chrX 4335328 4335358 -18087469 + (A)n Simple_repeat Simple_repeat 1 30 0 1 618 261 98 0 0 chrX 4335943 4335984 -18086843 + (T)n Simple_repeat Simple_repeat 1 41 0 1 618 189 0 0 0 chrX 4336951 4336972 -18085855 + (CAT)n Simple_repeat Simple_repeat 2 22 0 1 618 24 0 0 0 chrX 4337363 4337387 -18085440 + AT_rich Low_complexity Low_complexity 1 24 0 1 618 222 208 0 0 chrX 4337771 4337819 -18085008 + (CCCA)n Simple_repeat Simple_repeat 3 50 0 1 618 21 0 0 0 chrX 4338751 4338772 -18084055 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 242 269 43 9 chrX 4338875 4338991 -18083836 + A-rich Low_complexity Low_complexity 1 120 0 1 618 21 0 0 0 chrX 4339161 4339182 -18083645 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 25 0 0 0 chrX 4339245 4339270 -18083557 + AT_rich Low_complexity Low_complexity 1 25 0 1 618 227 218 33 44 chrX 4339358 4339449 -18083378 + A-rich Low_complexity Low_complexity 5 94 0 1 618 234 62 0 0 chrX 4339997 4340029 -18082798 + (A)n Simple_repeat Simple_repeat 1 32 0 1 618 249 151 0 0 chrX 4342452 4342505 -18080322 + A-rich Low_complexity Low_complexity 1 53 0 1 618 201 74 0 0 chrX 4342860 4342887 -18079940 + (A)n Simple_repeat Simple_repeat 1 27 0 1 618 222 37 0 0 chrX 4343288 4343315 -18079512 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 618 261 75 0 0 chrX 4344063 4344103 -18078724 + (CATCG)n Simple_repeat Simple_repeat 1 40 0 1 618 206 105 0 26 chrX 4345912 4345951 -18076876 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 618 201 74 0 0 chrX 4348739 4348766 -18074061 + (CTG)n Simple_repeat Simple_repeat 3 29 0 1 618 21 0 0 0 chrX 4349059 4349080 -18073747 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 195 129 0 0 chrX 4349987 4350018 -18072809 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 618 22 0 0 0 chrX 4351176 4351198 -18071629 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 201 74 0 0 chrX 4351438 4351465 -18071362 + (A)n Simple_repeat Simple_repeat 1 27 0 1 618 23 68 0 0 chrX 4353900 4353944 -18068883 + AT_rich Low_complexity Low_complexity 1 44 0 1 618 22 0 0 0 chrX 4354146 4354168 -18068659 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 216 135 0 0 chrX 4354504 4354541 -18068286 + (A)n Simple_repeat Simple_repeat 1 37 0 1 618 25 65 0 0 chrX 4355022 4355068 -18067759 + AT_rich Low_complexity Low_complexity 1 46 0 1 618 258 81 0 0 chrX 4355172 4355209 -18067618 + (ATTCG)n Simple_repeat Simple_repeat 3 39 0 1 618 39 22 0 0 chrX 4355814 4355860 -18066967 + AT_rich Low_complexity Low_complexity 1 46 0 1 618 272 27 27 0 chrX 4356035 4356072 -18066755 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 1 618 207 0 0 0 chrX 4356237 4356260 -18066567 + (T)n Simple_repeat Simple_repeat 1 23 0 1 618 222 37 0 0 chrX 4356943 4356970 -18065857 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 618 201 39 0 0 chrX 4358644 4358670 -18064157 + (CAATC)n Simple_repeat Simple_repeat 2 27 0 1 618 335 57 0 36 chrX 4358952 4359007 -18063820 + (CAG)n Simple_repeat Simple_repeat 1 53 0 1 618 267 221 11 44 chrX 4359032 4359122 -18063705 + (TCTCTG)n Simple_repeat Simple_repeat 2 88 0 1 618 228 167 70 23 chrX 4360062 4360148 -18062679 + (GCTG)n Simple_repeat Simple_repeat 3 92 0 1 618 201 159 0 0 chrX 4360405 4360449 -18062378 + (CAGC)n Simple_repeat Simple_repeat 3 46 0 1 618 261 83 0 0 chrX 4360567 4360603 -18062224 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 618 225 0 0 0 chrX 4360776 4360801 -18062026 + (A)n Simple_repeat Simple_repeat 1 25 0 1 618 216 310 0 0 chrX 4361222 4361309 -18061518 + T-rich Low_complexity Low_complexity 1 87 0 1 618 267 79 0 0 chrX 4362757 4362795 -18060032 + (CAG)n Simple_repeat Simple_repeat 3 40 0 1 618 268 200 12 12 chrX 4362907 4362993 -18059834 + (CAT)n Simple_repeat Simple_repeat 1 86 0 1 618 24 32 0 0 chrX 4363082 4363113 -18059714 + AT_rich Low_complexity Low_complexity 1 31 0 1 618 180 0 0 0 chrX 4367722 4367742 -18055085 + (T)n Simple_repeat Simple_repeat 1 20 0 1 618 250 192 0 19 chrX 4367927 4367980 -18054847 - DOC6_DM LINE Jockey -1549 2673 2622 1 618 210 91 0 0 chrX 4368376 4368409 -18054418 + (CAT)n Simple_repeat Simple_repeat 3 35 0 1 618 254 214 11 33 chrX 4369006 4369098 -18053729 + ROO_I LTR Pao 652 741 -7515 1 618 218 227 0 0 chrX 4369109 4369153 -18053674 + (CAA)n Simple_repeat Simple_repeat 1 44 0 1 618 311 194 19 48 chrX 4369368 4369471 -18053356 + ROO_I LTR Pao 640 739 -7517 1 618 365 250 0 0 chrX 4369751 4369851 -18052976 + ROO_I LTR Pao 644 743 -7513 1 618 192 77 0 0 chrX 4370165 4370191 -18052636 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 618 195 42 0 0 chrX 4371214 4371238 -18051589 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 618 257 275 14 0 chrX 4371676 4371745 -18051082 + (CTG)n Simple_repeat Simple_repeat 1 70 0 1 618 282 95 0 0 chrX 4373855 4373897 -18048930 + (CAGT)n Simple_repeat Simple_repeat 3 44 0 1 618 276 111 0 0 chrX 4374188 4374233 -18048594 + (ATG)n Simple_repeat Simple_repeat 1 45 0 1 618 210 91 0 0 chrX 4374534 4374567 -18048260 + (T)n Simple_repeat Simple_repeat 1 33 0 1 618 237 83 0 0 chrX 4375221 4375257 -18047570 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 618 233 130 43 0 chrX 4375749 4375795 -18047032 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 1 618 183 170 0 0 chrX 4377532 4377579 -18045248 + (CAG)n Simple_repeat Simple_repeat 1 47 0 1 618 249 218 0 0 chrX 4378114 4378169 -18044658 + A-rich Low_complexity Low_complexity 1 55 0 1 618 260 27 0 26 chrX 4378375 4378413 -18044414 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 618 214 246 0 0 chrX 4378446 4378515 -18044312 + A-rich Low_complexity Low_complexity 1 69 0 1 618 209 157 19 19 chrX 4378654 4378706 -18044121 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 618 28 61 0 0 chrX 4378955 4379004 -18043823 + AT_rich Low_complexity Low_complexity 1 49 0 1 618 265 216 13 13 chrX 4379117 4379192 -18043635 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 618 22 0 0 0 chrX 4379224 4379246 -18043581 + AT_rich Low_complexity Low_complexity 1 22 0 1 618 273 109 0 0 chrX 4379314 4379360 -18043467 + (CAT)n Simple_repeat Simple_repeat 1 46 0 1 618 23 33 0 0 chrX 4379445 4379475 -18043352 + AT_rich Low_complexity Low_complexity 1 30 0 1 618 249 128 0 0 chrX 4379493 4379540 -18043287 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 618 219 88 0 0 chrX 4379555 4379589 -18043238 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 618 215 214 14 28 chrX 4379651 4379723 -18043104 + A-rich Low_complexity Low_complexity 4 74 0 1 618 186 43 0 0 chrX 4379932 4379955 -18042872 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1 618 252 130 0 0 chrX 4380506 4380552 -18042275 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 618 839 295 72 40 chrX 4381031 4381684 -18041143 - SAR_DM Satellite Satellite -592 673 1 1 618 207 100 0 0 chrX 4384364 4384394 -18038433 + (CTATA)n Simple_repeat Simple_repeat 5 34 0 1 618 243 203 0 0 chrX 4384649 4384723 -18038104 + (CAA)n Simple_repeat Simple_repeat 1 74 0 1 618 36 70 0 0 chrX 4385030 4385101 -18037726 + AT_rich Low_complexity Low_complexity 1 71 0 1 618 27 0 0 0 chrX 4387309 4387336 -18035491 + AT_rich Low_complexity Low_complexity 1 27 0 1 618 192 40 0 0 chrX 4389891 4389916 -18032911 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 618 243 0 0 0 chrX 4390639 4390666 -18032161 + (ATGTG)n Simple_repeat Simple_repeat 1 27 0 1 618 297 51 0 0 chrX 4390839 4390878 -18031949 + (CATAC)n Simple_repeat Simple_repeat 5 43 0 1 618 351 44 0 0 chrX 4393306 4393351 -18029476 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 618 228 86 0 0 chrX 4394267 4394302 -18028525 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 618 21 0 0 0 chrX 4394728 4394749 -18028078 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 193 128 21 21 chrX 4397996 4398044 -18024783 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 618 212 143 0 0 chrX 4399012 4399047 -18023780 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 1 618 192 158 0 0 chrX 4399085 4399123 -18023704 + (CAA)n Simple_repeat Simple_repeat 3 40 0 1 618 213 121 0 0 chrX 4399254 4399287 -18023540 + (TTG)n Simple_repeat Simple_repeat 3 35 0 1 618 255 157 0 0 chrX 4399315 4399366 -18023461 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 618 230 226 0 0 chrX 4402266 4402319 -18020508 + GA-rich Low_complexity Low_complexity 1 53 0 1 618 222 200 0 0 chrX 4403328 4403373 -18019454 + (TTG)n Simple_repeat Simple_repeat 2 46 0 1 618 258 231 0 37 chrX 4404041 4404122 -18018705 + (TTTCG)n Simple_repeat Simple_repeat 3 80 0 1 618 21 36 0 0 chrX 4404861 4404889 -18017938 + AT_rich Low_complexity Low_complexity 1 28 0 1 618 225 83 0 0 chrX 4405828 4405864 -18016963 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 618 204 158 0 0 chrX 4406389 4406427 -18016400 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 618 198 0 0 0 chrX 4408194 4408216 -18014611 + (TGG)n Simple_repeat Simple_repeat 1 22 0 1 618 23 0 0 0 chrX 4409227 4409250 -18013577 + AT_rich Low_complexity Low_complexity 1 23 0 1 618 513 88 0 0 chrX 4411315 4411395 -18011432 + (CATAC)n Simple_repeat Simple_repeat 2 81 0 1 618 210 91 0 0 chrX 4411725 4411758 -18011069 + (AGATG)n Simple_repeat Simple_repeat 4 36 0 1 618 318 115 0 0 chrX 4411754 4411806 -18011021 + (GGTTG)n Simple_repeat Simple_repeat 1 52 0 1 618 273 109 0 0 chrX 4413187 4413233 -18009594 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 618 210 208 0 0 chrX 4413304 4413357 -18009470 + T-rich Low_complexity Low_complexity 1 53 0 1 618 336 175 0 0 chrX 4413996 4414059 -18008768 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 618 270 81 0 0 chrX 4414394 4414431 -18008396 + (CATA)n Simple_repeat Simple_repeat 4 40 0 1 618 21 0 0 0 chrX 4417266 4417287 -18005540 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 287 104 0 20 chrX 4417881 4417930 -18004897 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 618 21 0 0 0 chrX 4420614 4420635 -18002192 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 183 100 0 0 chrX 4421287 4421317 -18001510 + (TTTTTG)n Simple_repeat Simple_repeat 6 35 0 1 618 25 31 0 0 chrX 4421838 4421870 -18000957 + AT_rich Low_complexity Low_complexity 1 32 0 1 618 213 180 0 0 chrX 4424786 4424836 -17997991 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 618 201 325 0 67 chrX 4425589 4425678 -17997149 + (CAG)n Simple_repeat Simple_repeat 3 85 0 1 618 204 163 0 0 chrX 4427850 4427893 -17994934 + A-rich Low_complexity Low_complexity 1 43 0 1 618 220 237 17 0 chrX 4428085 4428144 -17994683 + A-rich Low_complexity Low_complexity 2 61 0 1 618 218 208 0 0 chrX 4428611 4428659 -17994168 + A-rich Low_complexity Low_complexity 1 48 0 1 618 208 347 0 10 chrX 4431896 4431992 -17990835 + (CTG)n Simple_repeat Simple_repeat 3 97 0 1 618 29 0 0 0 chrX 4436308 4436337 -17986490 + AT_rich Low_complexity Low_complexity 1 29 0 1 618 206 231 0 0 chrX 4438505 4438544 -17984283 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1 618 204 97 0 0 chrX 4438883 4438914 -17983913 + (T)n Simple_repeat Simple_repeat 1 31 0 1 618 180 0 0 0 chrX 4439035 4439055 -17983772 + (TATAA)n Simple_repeat Simple_repeat 4 23 0 1 618 189 74 0 0 chrX 4439185 4439212 -17983615 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 618 274 61 20 20 chrX 4439212 4439262 -17983565 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 618 188 190 0 33 chrX 4440233 4440293 -17982534 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 1 618 189 121 0 0 chrX 4440519 4440552 -17982275 + (T)n Simple_repeat Simple_repeat 1 33 0 1 618 255 79 0 0 chrX 4441830 4441868 -17980959 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1 618 21 57 0 0 chrX 4444032 4444067 -17978760 + AT_rich Low_complexity Low_complexity 1 35 0 1 618 180 77 0 0 chrX 4444287 4444313 -17978514 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 618 213 94 0 0 chrX 4446294 4446326 -17976501 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 618 195 100 0 0 chrX 4448943 4448973 -17973854 + (TATG)n Simple_repeat Simple_repeat 3 32 0 1 618 198 128 0 0 chrX 4449199 4449238 -17973589 + (A)n Simple_repeat Simple_repeat 1 39 0 1 618 243 0 0 0 chrX 4449618 4449645 -17973182 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 618 239 271 0 17 chrX 4449931 4449991 -17972836 + (TATATG)n Simple_repeat Simple_repeat 3 61 0 1 618 344 182 0 13 chrX 4450269 4450347 -17972480 - ROO_I LTR Pao -7526 730 654 1 618 180 135 0 0 chrX 4450847 4450884 -17971943 + (A)n Simple_repeat Simple_repeat 1 37 0 1 618 21 0 0 0 chrX 4451995 4452016 -17970811 + AT_rich Low_complexity Low_complexity 1 21 0 1 618 222 174 0 0 chrX 4452509 4452555 -17970272 + (CGA)n Simple_repeat Simple_repeat 3 48 0 1 618 218 325 0 0 chrX 4452851 4452934 -17969893 + (CGA)n Simple_repeat Simple_repeat 3 85 0 1 618 308 253 0 0 chrX 4453076 4453167 -17969660 + GA-rich Low_complexity Low_complexity 3 93 0 1 618 238 310 0 0 chrX 4453203 4453290 -17969537 + GA-rich Low_complexity Low_complexity 4 90 0 1 618 237 33 0 0 chrX 4453447 4453477 -17969350 + (GAA)n Simple_repeat Simple_repeat 2 31 0 1 618 281 196 0 110 chrX 4453478 4453587 -17969240 + ROO_I LTR Pao 637 733 -7523 1 618 361 266 9 9 chrX 4453641 4453751 -17969076 + (CAG)n Simple_repeat Simple_repeat 3 112 0 1 618 284 161 16 0 chrX 4454972 4455034 -17967793 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 619 183 42 0 0 chrX 4456949 4456973 -17965854 + (CAT)n Simple_repeat Simple_repeat 1 24 0 1 619 23 33 0 0 chrX 4457694 4457724 -17965103 + AT_rich Low_complexity Low_complexity 1 30 0 1 619 216 167 0 0 chrX 4458166 4458214 -17964613 + A-rich Low_complexity Low_complexity 1 48 0 1 619 234 62 0 0 chrX 4460217 4460249 -17962578 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 619 33 56 0 0 chrX 4461270 4461324 -17961503 + AT_rich Low_complexity Low_complexity 1 54 0 1 619 186 167 0 0 chrX 4462348 4462384 -17960443 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 619 180 0 0 0 chrX 4464741 4464761 -17958066 + (A)n Simple_repeat Simple_repeat 1 20 0 1 619 185 0 0 39 chrX 4466701 4466727 -17956100 + (TCCA)n Simple_repeat Simple_repeat 3 27 0 1 619 22 0 0 0 chrX 4466817 4466839 -17955988 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 270 56 0 0 chrX 4469381 4469417 -17953410 + (CCAA)n Simple_repeat Simple_repeat 4 39 0 1 619 225 0 0 0 chrX 4471929 4471954 -17950873 + (GCTG)n Simple_repeat Simple_repeat 4 28 0 1 619 29 47 0 0 chrX 4472082 4472125 -17950702 + AT_rich Low_complexity Low_complexity 1 43 0 1 619 22 0 0 0 chrX 4472204 4472226 -17950601 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 27 29 0 0 chrX 4473809 4473843 -17948984 + AT_rich Low_complexity Low_complexity 1 34 0 1 619 23 33 0 0 chrX 4474495 4474525 -17948302 + AT_rich Low_complexity Low_complexity 1 30 0 1 619 23 0 0 0 chrX 4475975 4475998 -17946829 + AT_rich Low_complexity Low_complexity 1 23 0 1 619 28 61 0 0 chrX 4476631 4476680 -17946147 + AT_rich Low_complexity Low_complexity 1 49 0 1 619 210 143 0 0 chrX 4478212 4478247 -17944580 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 619 275 278 100 42 chrX 4479881 4480140 -17942687 + SAR_DM Satellite Satellite 958 1231 -241 1 619 25 0 0 0 chrX 4480730 4480755 -17942072 + AT_rich Low_complexity Low_complexity 1 25 0 1 619 180 77 0 0 chrX 4483315 4483341 -17939486 + (T)n Simple_repeat Simple_repeat 1 26 0 1 619 24 53 0 0 chrX 4483632 4483670 -17939157 + AT_rich Low_complexity Low_complexity 1 38 0 1 619 204 97 0 0 chrX 4484045 4484076 -17938751 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 619 321 47 0 0 chrX 4484462 4484505 -17938322 + (CTG)n Simple_repeat Simple_repeat 2 44 0 1 619 25 65 0 0 chrX 4487206 4487252 -17935575 + AT_rich Low_complexity Low_complexity 1 46 0 1 619 25 31 0 0 chrX 4488984 4489016 -17933811 + AT_rich Low_complexity Low_complexity 1 32 0 1 619 192 40 0 0 chrX 4490664 4490689 -17932138 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 619 24 53 0 0 chrX 4493145 4493183 -17929644 + AT_rich Low_complexity Low_complexity 1 38 0 1 619 189 74 0 0 chrX 4493920 4493947 -17928880 + (CCA)n Simple_repeat Simple_repeat 2 28 0 1 619 195 42 0 0 chrX 4494756 4494780 -17928047 + (CAAAC)n Simple_repeat Simple_repeat 3 26 0 1 619 255 31 0 0 chrX 4495181 4495213 -17927614 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 619 209 57 29 0 chrX 4495641 4495676 -17927151 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 619 27 92 0 0 chrX 4495983 4496059 -17926768 + AT_rich Low_complexity Low_complexity 1 76 0 1 619 204 211 19 19 chrX 4496360 4496413 -17926414 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 619 252 213 0 0 chrX 4496706 4496767 -17926060 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 619 23 0 0 0 chrX 4498317 4498340 -17924487 + AT_rich Low_complexity Low_complexity 1 23 0 1 619 22 0 0 0 chrX 4499008 4499030 -17923797 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 34 24 0 0 chrX 4500000 4500041 -17922786 + AT_rich Low_complexity Low_complexity 1 41 0 1 619 213 227 0 0 chrX 4500751 4500795 -17922032 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1 619 249 33 0 0 chrX 4501228 4501258 -17921569 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 619 203 167 28 0 chrX 4503888 4503924 -17918903 + (CAGCT)n Simple_repeat Simple_repeat 5 41 0 1 619 23 86 0 0 chrX 4504944 4505002 -17917825 + AT_rich Low_complexity Low_complexity 1 58 0 1 619 192 152 0 0 chrX 4505054 4505087 -17917740 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 619 27 29 0 0 chrX 4505732 4505766 -17917061 + AT_rich Low_complexity Low_complexity 1 34 0 1 619 21 36 0 0 chrX 4505922 4505950 -17916877 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 205 88 29 0 chrX 4506498 4506532 -17916295 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1 619 182 37 37 0 chrX 4506750 4506777 -17916050 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 619 288 0 0 0 chrX 4507179 4507211 -17915616 + (GCTG)n Simple_repeat Simple_repeat 2 33 0 1 619 213 108 0 0 chrX 4507513 4507550 -17915277 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 1 619 206 250 0 0 chrX 4507621 4507665 -17915162 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 1 619 272 278 0 11 chrX 4509687 4509778 -17913049 + (TTG)n Simple_repeat Simple_repeat 3 92 0 1 619 25 31 0 0 chrX 4509885 4509917 -17912910 + AT_rich Low_complexity Low_complexity 1 32 0 1 619 261 169 0 0 chrX 4510086 4510145 -17912682 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 619 321 89 0 0 chrX 4510742 4510787 -17912040 + (CATA)n Simple_repeat Simple_repeat 4 48 0 1 619 183 186 0 0 chrX 4513114 4513157 -17909670 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 619 192 111 0 0 chrX 4514313 4514349 -17908478 + (GGA)n Simple_repeat Simple_repeat 1 36 0 1 619 278 244 0 0 chrX 4515349 4515435 -17907392 + ROO_I LTR Pao 641 726 -7530 1 619 222 37 0 0 chrX 4516981 4517008 -17905819 + (CAG)n Simple_repeat Simple_repeat 1 27 0 1 619 204 158 0 0 chrX 4517632 4517670 -17905157 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1 619 266 283 0 0 chrX 4518936 4519035 -17903792 + GA-rich Low_complexity Low_complexity 2 100 0 1 619 209 194 0 0 chrX 4519080 4519116 -17903711 + (CTG)n Simple_repeat Simple_repeat 3 38 0 1 619 423 174 0 0 chrX 4519683 4519769 -17903058 + (CAA)n Simple_repeat Simple_repeat 1 86 0 1 619 200 217 0 0 chrX 4520120 4520166 -17902661 + A-rich Low_complexity Low_complexity 1 46 0 1 619 225 209 0 0 chrX 4520243 4520286 -17902541 + A-rich Low_complexity Low_complexity 1 43 0 1 619 189 0 0 0 chrX 4520810 4520831 -17901996 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 619 200 209 0 0 chrX 4523025 4523068 -17899759 + (TGG)n Simple_repeat Simple_repeat 2 44 0 1 619 1808 67 185 10 chrX 4525014 4525316 -17897511 - DNAREP1_DM LINE Penelope -234 360 6 1 619 31 26 0 0 chrX 4525378 4525416 -17897411 + AT_rich Low_complexity Low_complexity 1 38 0 1 619 200 209 0 0 chrX 4527163 4527206 -17895621 + (TGG)n Simple_repeat Simple_repeat 2 44 0 1 619 226 161 0 0 chrX 4530774 4530830 -17891997 + ROO_I LTR Pao 690 745 -7511 1 619 210 317 0 40 chrX 4531896 4532047 -17890780 + GA-rich Low_complexity Low_complexity 4 148 0 1 619 207 204 0 0 chrX 4533056 4533110 -17889717 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 619 273 218 0 37 chrX 4535424 4535505 -17887322 + CT-rich Low_complexity Low_complexity 5 82 0 1 619 195 100 0 0 chrX 4536523 4536553 -17886274 + (A)n Simple_repeat Simple_repeat 1 30 0 1 619 189 0 0 0 chrX 4536562 4536583 -17886244 + (CAGAG)n Simple_repeat Simple_repeat 3 23 0 1 619 238 175 0 34 chrX 4537406 4537465 -17885362 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 1 619 39 22 0 0 chrX 4538385 4538431 -17884396 + AT_rich Low_complexity Low_complexity 1 46 0 1 619 222 37 0 0 chrX 4538678 4538705 -17884122 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 619 22 0 0 0 chrX 4548322 4548344 -17874483 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 198 71 0 0 chrX 4548538 4548566 -17874261 + (A)n Simple_repeat Simple_repeat 1 28 0 1 619 34 0 0 0 chrX 4549664 4549698 -17873129 + AT_rich Low_complexity Low_complexity 1 34 0 1 619 355 257 18 0 chrX 4552197 4552306 -17870521 + (TA)n Simple_repeat Simple_repeat 2 112 0 1 619 22 0 0 0 chrX 4554909 4554931 -17867896 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 192 97 0 0 chrX 4555374 4555405 -17867422 + (T)n Simple_repeat Simple_repeat 1 31 0 1 619 201 159 0 0 chrX 4556272 4556316 -17866511 + T-rich Low_complexity Low_complexity 1 44 0 1 619 1472 284 42 40 chrX 4556823 4557795 -17865032 + SAR_DM Satellite Satellite 1 973 -353 1 619 251 210 0 0 chrX 4558229 4558291 -17864536 + T-rich Low_complexity Low_complexity 1 62 0 1 619 26 0 0 0 chrX 4558676 4558702 -17864125 + AT_rich Low_complexity Low_complexity 1 26 0 1 619 208 243 0 14 chrX 4560774 4560845 -17861982 + A-rich Low_complexity Low_complexity 1 70 0 1 619 21 0 0 0 chrX 4561451 4561472 -17861355 + AT_rich Low_complexity Low_complexity 1 21 0 1 619 228 86 0 0 chrX 4561941 4561976 -17860851 + (TTTTG)n Simple_repeat Simple_repeat 5 39 0 1 619 237 33 0 0 chrX 4564692 4564722 -17858105 + (T)n Simple_repeat Simple_repeat 1 30 0 1 619 24 0 0 0 chrX 4565293 4565317 -17857510 + AT_rich Low_complexity Low_complexity 1 24 0 1 619 22 35 0 0 chrX 4565654 4565683 -17857144 + AT_rich Low_complexity Low_complexity 1 29 0 1 619 30 0 0 0 chrX 4566502 4566532 -17856295 + AT_rich Low_complexity Low_complexity 1 30 0 1 619 189 0 0 0 chrX 4567168 4567189 -17855638 + (CGA)n Simple_repeat Simple_repeat 3 23 0 1 619 22 0 0 0 chrX 4568841 4568863 -17853964 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 204 40 0 0 chrX 4569532 4569557 -17853270 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 619 28 0 0 0 chrX 4570171 4570199 -17852628 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 21 0 0 0 chrX 4570560 4570581 -17852246 + AT_rich Low_complexity Low_complexity 1 21 0 1 619 22 0 0 0 chrX 4571208 4571230 -17851597 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 28 0 0 0 chrX 4571475 4571503 -17851324 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 183 80 0 0 chrX 4572348 4572373 -17850454 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 619 21 36 0 0 chrX 4574330 4574358 -17848469 + AT_rich Low_complexity Low_complexity 1 28 0 1 619 25 51 0 0 chrX 4574433 4574472 -17848355 + AT_rich Low_complexity Low_complexity 1 39 0 1 619 189 0 0 0 chrX 4574512 4574533 -17848294 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 619 189 74 0 0 chrX 4575537 4575564 -17847263 + (CCG)n Simple_repeat Simple_repeat 2 28 0 1 619 237 128 0 0 chrX 4576530 4576577 -17846250 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 619 180 97 0 0 chrX 4576801 4576832 -17845995 + (TTCGGG)n Simple_repeat Simple_repeat 2 32 0 1 619 228 111 0 0 chrX 4576924 4576960 -17845867 + (TCC)n Simple_repeat Simple_repeat 1 36 0 1 619 24 0 0 0 chrX 4580784 4580808 -17842019 + AT_rich Low_complexity Low_complexity 1 24 0 1 619 22 88 0 0 chrX 4581385 4581442 -17841385 + AT_rich Low_complexity Low_complexity 1 57 0 1 619 27 0 0 0 chrX 4581749 4581776 -17841051 + AT_rich Low_complexity Low_complexity 1 27 0 1 619 1069 129 96 81 chrX 4582400 4582661 -17840166 + HMSBEAGLE_I LTR Gypsy 977 1241 -5288 1 619 278 88 59 0 chrX 4583264 4583332 -17839495 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 619 395 103 41 0 chrX 4583411 4583508 -17839319 + (TA)n Simple_repeat Simple_repeat 1 101 0 1 619 234 91 0 0 chrX 4583527 4583560 -17839267 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 619 294 73 0 0 chrX 4585000 4585041 -17837786 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 619 252 0 0 0 chrX 4585415 4585443 -17837384 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 619 195 42 0 0 chrX 4586135 4586159 -17836668 + (T)n Simple_repeat Simple_repeat 1 24 0 1 620 245 128 0 21 chrX 4588279 4588327 -17834500 + (TC)n Simple_repeat Simple_repeat 1 47 0 1 620 229 196 20 0 chrX 4588991 4589042 -17833785 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 620 183 173 0 0 chrX 4589585 4589637 -17833190 + T-rich Low_complexity Low_complexity 1 52 0 1 620 219 36 0 0 chrX 4590207 4590235 -17832592 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 620 24 32 0 0 chrX 4591306 4591337 -17831490 + AT_rich Low_complexity Low_complexity 1 31 0 1 620 208 229 0 0 chrX 4592538 4592586 -17830241 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1 620 417 183 0 0 chrX 4592621 4592725 -17830102 + (CAA)n Simple_repeat Simple_repeat 2 105 0 1 620 224 266 0 0 chrX 4592835 4592899 -17829928 + (CGA)n Simple_repeat Simple_repeat 1 64 0 1 620 561 42 0 0 chrX 4593563 4593635 -17829192 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 620 2171 4 0 19 chrX 4594498 4594765 -17828062 - LINEJ1_DM LINE Jockey 0 5020 4759 1 620 207 211 18 0 chrX 4595271 4595328 -17827499 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 620 225 178 0 0 chrX 4595428 4595473 -17827354 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 620 238 259 0 36 chrX 4596731 4596815 -17826012 + (CAA)n Simple_repeat Simple_repeat 3 83 0 1 620 186 43 0 0 chrX 4597028 4597051 -17825776 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 620 28 0 0 0 chrX 4601507 4601535 -17821292 + AT_rich Low_complexity Low_complexity 1 28 0 1 620 183 100 0 0 chrX 4602616 4602646 -17820181 + (T)n Simple_repeat Simple_repeat 1 30 0 1 620 24 0 0 0 chrX 4602713 4602737 -17820090 + AT_rich Low_complexity Low_complexity 1 24 0 1 620 219 69 0 0 chrX 4603275 4603304 -17819523 + (CATA)n Simple_repeat Simple_repeat 3 31 0 1 620 246 254 0 16 chrX 4603333 4603397 -17819430 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1 620 189 132 0 0 chrX 4603626 4603664 -17819163 + (A)n Simple_repeat Simple_repeat 1 38 0 1 620 33 0 0 0 chrX 4606081 4606114 -17816713 + AT_rich Low_complexity Low_complexity 1 33 0 1 620 305 82 20 0 chrX 4606526 4606575 -17816252 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 620 24 53 0 0 chrX 4607334 4607372 -17815455 + AT_rich Low_complexity Low_complexity 1 38 0 1 620 876 276 53 45 chrX 4608126 4608952 -17813875 - SAR_DM Satellite Satellite -995 833 1 1 620 189 0 0 0 chrX 4609324 4609345 -17813482 + (T)n Simple_repeat Simple_repeat 1 21 0 1 620 285 98 0 0 chrX 4609496 4609537 -17813290 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 620 288 53 0 0 chrX 4611053 4611091 -17811736 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 620 180 0 0 0 chrX 4611664 4611684 -17811143 + (C)n Simple_repeat Simple_repeat 1 20 0 1 620 237 33 0 0 chrX 4612211 4612241 -17810586 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 620 195 42 0 0 chrX 4612354 4612378 -17810449 + (CTG)n Simple_repeat Simple_repeat 2 25 0 1 620 276 30 0 0 chrX 4614042 4614075 -17808752 + (ACTG)n Simple_repeat Simple_repeat 2 34 0 1 620 23 0 0 0 chrX 4614831 4614854 -17807973 + AT_rich Low_complexity Low_complexity 1 23 0 1 620 216 0 0 0 chrX 4614902 4614926 -17807901 + (A)n Simple_repeat Simple_repeat 1 24 0 1 620 198 128 0 0 chrX 4615075 4615114 -17807713 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 620 213 39 0 0 chrX 4615498 4615524 -17807303 + (CAA)n Simple_repeat Simple_repeat 3 28 0 1 620 219 192 19 37 chrX 4615654 4615762 -17807065 + (TTCA)n Simple_repeat Simple_repeat 3 108 0 1 620 225 94 0 0 chrX 4617138 4617170 -17805657 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 620 239 343 10 0 chrX 4617352 4617454 -17805373 + (CGG)n Simple_repeat Simple_repeat 2 104 0 1 620 216 67 0 0 chrX 4618109 4618139 -17804688 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 620 195 129 0 0 chrX 4618241 4618272 -17804555 + (CAA)n Simple_repeat Simple_repeat 1 31 0 1 620 384 88 0 0 chrX 4619674 4619731 -17803096 + (CTG)n Simple_repeat Simple_repeat 1 57 0 1 620 23 0 0 0 chrX 4622090 4622113 -17800714 + AT_rich Low_complexity Low_complexity 1 23 0 1 620 21 0 0 0 chrX 4624448 4624469 -17798358 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 24 0 0 0 chrX 4624982 4625006 -17797821 + AT_rich Low_complexity Low_complexity 1 24 0 1 620 240 100 0 0 chrX 4625144 4625184 -17797643 + (T)n Simple_repeat Simple_repeat 1 40 0 1 620 46617 6 0 1 chrX 4625917 4630935 -17791892 - LINEJ1_DM LINE Jockey 0 5020 6 1 620 183 188 0 0 chrX 4630979 4631027 -17791800 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 620 264 91 0 0 chrX 4631182 4631226 -17791601 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 620 239 93 0 23 chrX 4631681 4631725 -17791102 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 620 23 54 0 0 chrX 4633694 4633731 -17789096 + AT_rich Low_complexity Low_complexity 1 37 0 1 620 230 125 21 0 chrX 4633845 4633893 -17788934 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 620 212 0 36 0 chrX 4634419 4634447 -17788380 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 620 228 35 0 0 chrX 4634639 4634668 -17788159 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 620 189 0 0 0 chrX 4635557 4635578 -17787249 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 620 29 28 0 0 chrX 4635578 4635614 -17787213 + AT_rich Low_complexity Low_complexity 1 36 0 1 620 206 116 0 23 chrX 4637731 4637775 -17785052 + (CAAAC)n Simple_repeat Simple_repeat 4 46 0 1 620 229 140 0 34 chrX 4639868 4639927 -17782900 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 620 267 79 0 0 chrX 4640014 4640052 -17782775 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 620 21 0 0 0 chrX 4644063 4644084 -17778743 + AT_rich Low_complexity Low_complexity 1 21 0 1 620 186 207 0 0 chrX 4644199 4644257 -17778570 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 620 389 181 38 0 chrX 4645441 4645546 -17777281 - ROO_I LTR Pao -7515 741 633 1 620 201 121 0 0 chrX 4647484 4647517 -17775310 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 620 225 65 0 0 chrX 4648047 4648078 -17774749 + (TGAG)n Simple_repeat Simple_repeat 4 34 0 1 620 288 91 0 0 chrX 4648724 4648768 -17774059 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 620 225 108 0 0 chrX 4648894 4648931 -17773896 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 620 192 40 0 0 chrX 4652187 4652212 -17770615 + (CAG)n Simple_repeat Simple_repeat 2 26 0 1 620 24 53 0 0 chrX 4653193 4653231 -17769596 + AT_rich Low_complexity Low_complexity 1 38 0 1 620 323 44 22 0 chrX 4653457 4653502 -17769325 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 620 261 0 0 0 chrX 4654298 4654327 -17768500 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 620 192 161 0 46 chrX 4654990 4655055 -17767772 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 620 27 0 0 0 chrX 4655947 4655974 -17766853 + AT_rich Low_complexity Low_complexity 1 27 0 1 620 183 162 0 0 chrX 4656659 4656696 -17766131 + (TTG)n Simple_repeat Simple_repeat 1 37 0 1 620 3696 0 0 2 chrX 4657339 4657742 -17765085 + STALKER4_LTR LTR Gypsy 1 402 0 1 620 225 196 0 0 chrX 4658945 4659001 -17763826 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 620 231 188 28 28 chrX 4660110 4660181 -17762646 - SAR_DM Satellite Satellite -1067 405 335 1 620 22 0 0 0 chrX 4660332 4660354 -17762473 + AT_rich Low_complexity Low_complexity 1 22 0 1 620 31 0 0 0 chrX 4660768 4660799 -17762028 + AT_rich Low_complexity Low_complexity 1 31 0 1 620 204 40 0 0 chrX 4660927 4660952 -17761875 + (TATG)n Simple_repeat Simple_repeat 3 27 0 1 620 222 176 0 0 chrX 4662631 4662682 -17760145 + (CAA)n Simple_repeat Simple_repeat 3 53 0 1 620 303 71 0 0 chrX 4662848 4662890 -17759937 + (TTG)n Simple_repeat Simple_repeat 1 42 0 1 620 180 77 0 0 chrX 4667484 4667510 -17755317 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 620 22 0 0 0 chrX 4670000 4670022 -17752805 + AT_rich Low_complexity Low_complexity 1 22 0 1 620 252 172 0 0 chrX 4672451 4672509 -17750318 + (TTG)n Simple_repeat Simple_repeat 3 60 0 1 620 23 0 0 0 chrX 4672903 4672926 -17749901 + AT_rich Low_complexity Low_complexity 1 23 0 1 620 189 74 0 0 chrX 4673286 4673313 -17749514 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 620 192 125 0 0 chrX 4673625 4673657 -17749170 + (ATG)n Simple_repeat Simple_repeat 1 32 0 1 620 261 57 0 0 chrX 4674498 4674533 -17748294 + (CAAAC)n Simple_repeat Simple_repeat 5 39 0 1 620 300 70 0 0 chrX 4674764 4674807 -17748020 + (CACCAT)n Simple_repeat Simple_repeat 1 43 0 1 620 243 0 0 0 chrX 4676209 4676236 -17746591 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 1 620 180 0 0 0 chrX 4680918 4680938 -17741889 + (T)n Simple_repeat Simple_repeat 1 20 0 1 620 272 244 22 22 chrX 4681442 4681534 -17741293 + (CATATA)n Simple_repeat Simple_repeat 6 97 0 1 620 214 200 0 0 chrX 4681820 4681860 -17740967 + (TAA)n Simple_repeat Simple_repeat 2 41 0 1 620 297 0 0 0 chrX 4682304 4682337 -17740490 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 620 189 0 0 0 chrX 4683206 4683227 -17739600 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 620 4017 0 0 0 chrX 4683600 4684028 -17738799 - ROO_LTR LTR Pao 0 428 1 1 620 6812 1 1 0 chrX 4684028 4684794 -17738033 - ROO_I LTR Pao 0 8256 7490 1 620 24 0 0 0 chrX 4686460 4686484 -17736343 + AT_rich Low_complexity Low_complexity 1 24 0 1 620 3043 8 0 14 chrX 4686484 4686843 -17735984 - LINEJ1_DM LINE Jockey 0 5020 4667 1 620 249 151 0 0 chrX 4687230 4687283 -17735544 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 620 312 152 0 0 chrX 4689385 4689451 -17733376 + (CGGAA)n Simple_repeat Simple_repeat 4 69 0 1 620 27 29 0 0 chrX 4689664 4689698 -17733129 + AT_rich Low_complexity Low_complexity 1 34 0 1 620 225 108 0 0 chrX 4690634 4690671 -17732156 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 620 35 24 0 0 chrX 4691252 4691294 -17731533 + AT_rich Low_complexity Low_complexity 1 42 0 1 620 228 100 0 0 chrX 4691911 4691951 -17730876 + (A)n Simple_repeat Simple_repeat 1 40 0 1 620 424 72 246 0 chrX 4694735 4694804 -17728023 + DNAREP1_DM LINE Penelope 1 86 -508 1 620 34 55 0 0 chrX 4694817 4694872 -17727955 + AT_rich Low_complexity Low_complexity 1 55 0 1 620 482 216 29 22 chrX 4698142 4698279 -17724548 + DNAREP1_DM LINE Penelope 163 300 -294 1 620 355 203 160 42 chrX 4698311 4698455 -17724372 + MINOS DNA Tc1 210 370 -1405 1 620 451 220 0 35 chrX 4698503 4698616 -17724211 - MINOS DNA Tc1 -1654 121 13 1 620 222 246 0 0 chrX 4698640 4698701 -17724126 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 620 25 0 0 0 chrX 4698835 4698860 -17723967 + AT_rich Low_complexity Low_complexity 1 25 0 1 620 222 116 0 0 chrX 4701711 4701754 -17721073 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 620 216 67 0 0 chrX 4701822 4701852 -17720975 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 620 180 0 0 0 chrX 4701934 4701954 -17720873 + (GAA)n Simple_repeat Simple_repeat 3 22 0 1 620 26 0 0 0 chrX 4704353 4704379 -17718448 + AT_rich Low_complexity Low_complexity 1 26 0 1 620 245 287 8 17 chrX 4706062 4706179 -17716648 + GA-rich Low_complexity Low_complexity 2 117 0 1 620 24 0 0 0 chrX 4706286 4706310 -17716517 + AT_rich Low_complexity Low_complexity 1 24 0 1 620 195 69 0 0 chrX 4706477 4706506 -17716321 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1 620 285 155 0 0 chrX 4707985 4708043 -17714784 + T-rich Low_complexity Low_complexity 2 59 0 1 620 218 213 21 0 chrX 4708087 4708150 -17714677 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 1 620 222 222 7 30 chrX 4708994 4709077 -17713750 + T-rich Low_complexity Low_complexity 1 81 0 1 620 189 74 0 0 chrX 4709417 4709444 -17713383 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 620 231 173 0 0 chrX 4713368 4713420 -17709407 + (CTAAA)n Simple_repeat Simple_repeat 3 54 0 1 620 211 268 28 0 chrX 4714137 4714208 -17708619 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 1 620 21 36 0 0 chrX 4714580 4714608 -17708219 + AT_rich Low_complexity Low_complexity 1 28 0 1 620 213 163 0 0 chrX 4715886 4715935 -17706892 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 620 294 29 0 0 chrX 4716807 4716842 -17705985 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 77 1238 280 46 50 chrX 4717709 4718727 -17704100 - SAR_DM Satellite Satellite -722 1014 1 1 621 192 243 0 0 chrX 4721830 4721904 -17700923 + (TCCG)n Simple_repeat Simple_repeat 3 76 0 1 621 3676 0 0 5 chrX 4722082 4722486 -17700341 - STALKER4_LTR LTR Gypsy 0 402 1 1 621 57536 7 10 2 chrX 4722486 4728965 -17693862 - STALKER4_I LTR Gypsy 0 6530 1 1 621 3676 0 0 5 chrX 4728965 4729369 -17693458 - STALKER4_LTR LTR Gypsy 0 402 1 1 621 43 0 0 0 chrX 4730338 4730381 -17692446 + AT_rich Low_complexity Low_complexity 1 43 0 1 621 202 29 57 0 chrX 4735204 4735239 -17687588 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 1 621 26 0 0 0 chrX 4737036 4737062 -17685765 + AT_rich Low_complexity Low_complexity 1 26 0 1 621 201 281 0 0 chrX 4737999 4738056 -17684771 + (CCCG)n Simple_repeat Simple_repeat 3 59 0 1 621 22 0 0 0 chrX 4738262 4738284 -17684543 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 22 0 0 0 chrX 4738714 4738736 -17684091 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 23 0 0 0 chrX 4741316 4741339 -17681488 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 264 59 0 0 chrX 4743813 4743847 -17678980 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 621 188 122 24 0 chrX 4743889 4743930 -17678897 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 621 246 194 0 0 chrX 4743992 4744054 -17678773 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 621 276 77 0 0 chrX 4748351 4748390 -17674437 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 621 200 98 73 0 chrX 4748458 4748499 -17674328 + (CAAAC)n Simple_repeat Simple_repeat 1 44 0 1 621 210 37 0 0 chrX 4749185 4749212 -17673615 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 621 22 35 0 0 chrX 4749605 4749634 -17673193 + AT_rich Low_complexity Low_complexity 1 29 0 1 621 239 114 0 22 chrX 4750207 4750252 -17672575 + (TTGG)n Simple_repeat Simple_repeat 3 46 0 1 621 297 305 0 0 chrX 4752613 4752731 -17670096 + A-rich Low_complexity Low_complexity 1 118 0 1 621 198 156 0 0 chrX 4752935 4752980 -17669847 + A-rich Low_complexity Low_complexity 1 45 0 1 621 223 159 45 0 chrX 4754298 4754342 -17668485 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1 621 186 133 0 0 chrX 4754494 4754524 -17668303 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 621 228 67 0 0 chrX 4755176 4755206 -17667621 + (TTTAA)n Simple_repeat Simple_repeat 3 32 0 1 621 228 35 0 0 chrX 4755403 4755432 -17667395 + (T)n Simple_repeat Simple_repeat 1 29 0 1 621 231 36 0 0 chrX 4755987 4756015 -17666812 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 621 189 0 0 0 chrX 4757054 4757075 -17665752 + (TTG)n Simple_repeat Simple_repeat 3 23 0 1 621 29 28 0 0 chrX 4758782 4758818 -17664009 + AT_rich Low_complexity Low_complexity 1 36 0 1 621 286 175 0 24 chrX 4759588 4759670 -17663157 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 621 216 0 0 0 chrX 4760408 4760432 -17662395 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 621 183 42 0 0 chrX 4761070 4761094 -17661733 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 621 23 0 0 0 chrX 4761421 4761444 -17661383 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 609 134 0 0 chrX 4763743 4763855 -17658972 + (CAGT)n Simple_repeat Simple_repeat 1 112 0 1 621 204 125 0 0 chrX 4764283 4764315 -17658512 + (T)n Simple_repeat Simple_repeat 1 32 0 1 621 1024 285 50 46 chrX 4765485 4766139 -17656688 + SAR_DM Satellite Satellite 222 878 -594 1 621 499 294 15 10 chrX 4765976 4766175 -17656652 - XDMR Unknown Unknown 0 361 162 1 621 210 176 0 0 chrX 4766873 4766924 -17655903 + A-rich Low_complexity Low_complexity 1 51 0 1 621 23 33 0 0 chrX 4767299 4767329 -17655498 + AT_rich Low_complexity Low_complexity 1 30 0 1 621 21 0 0 0 chrX 4768493 4768514 -17654313 + AT_rich Low_complexity Low_complexity 1 21 0 1 621 291 54 0 0 chrX 4768976 4769013 -17653814 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 621 28 0 0 0 chrX 4769183 4769211 -17653616 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 28 0 0 0 chrX 4769259 4769287 -17653540 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 21 57 0 0 chrX 4769756 4769791 -17653036 + AT_rich Low_complexity Low_complexity 1 35 0 1 621 22 0 0 0 chrX 4771774 4771796 -17651031 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 194 62 31 0 chrX 4772414 4772446 -17650381 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 621 23 33 0 0 chrX 4773049 4773079 -17649748 + AT_rich Low_complexity Low_complexity 1 30 0 1 621 381 93 0 0 chrX 4773702 4773756 -17649071 + (CCAA)n Simple_repeat Simple_repeat 3 56 0 1 621 26 0 0 0 chrX 4773832 4773858 -17648969 + AT_rich Low_complexity Low_complexity 1 26 0 1 621 213 121 0 0 chrX 4774732 4774765 -17648062 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 621 22 35 0 0 chrX 4774843 4774872 -17647955 + AT_rich Low_complexity Low_complexity 1 29 0 1 621 21 36 0 0 chrX 4775716 4775744 -17647083 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 207 100 0 0 chrX 4776025 4776055 -17646772 + (TAAAAA)n Simple_repeat Simple_repeat 1 30 0 1 621 26 0 0 0 chrX 4776833 4776859 -17645968 + AT_rich Low_complexity Low_complexity 1 26 0 1 621 23 0 0 0 chrX 4778037 4778060 -17644767 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 212 351 0 31 chrX 4778674 4778771 -17644056 + (TATATG)n Simple_repeat Simple_repeat 2 95 0 1 621 23 0 0 0 chrX 4782397 4782420 -17640407 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 22 0 0 0 chrX 4783216 4783238 -17639589 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 279 0 0 0 chrX 4784106 4784137 -17638690 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 621 180 97 0 0 chrX 4784897 4784928 -17637899 + (T)n Simple_repeat Simple_repeat 1 31 0 1 621 231 114 0 0 chrX 4786469 4786504 -17636323 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 621 210 37 0 0 chrX 4788400 4788427 -17634400 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 621 252 0 0 0 chrX 4788651 4788679 -17634148 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1 621 231 309 0 10 chrX 4788758 4788856 -17633971 + (CCG)n Simple_repeat Simple_repeat 2 98 0 1 621 28 29 0 0 chrX 4789114 4789149 -17633678 + AT_rich Low_complexity Low_complexity 1 35 0 1 621 229 146 0 0 chrX 4789379 4789427 -17633400 + ROO_I LTR Pao 652 699 -7557 1 621 549 120 0 0 chrX 4789554 4789646 -17633181 + (CAG)n Simple_repeat Simple_repeat 3 94 0 1 621 22 0 0 0 chrX 4789924 4789946 -17632881 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 22 0 0 0 chrX 4790065 4790087 -17632740 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 312 91 0 0 chrX 4791097 4791141 -17631686 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 621 26 0 0 0 chrX 4792248 4792274 -17630553 + AT_rich Low_complexity Low_complexity 1 26 0 1 621 245 225 84 0 chrX 4792559 4792630 -17630197 + ROO_I LTR Pao 629 705 -7551 1 621 225 65 0 0 chrX 4793251 4793282 -17629545 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 621 22 0 0 0 chrX 4793756 4793778 -17629049 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 198 0 0 0 chrX 4795097 4795119 -17627708 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 621 226 247 11 22 chrX 4795248 4795267 -17627560 + T-rich Low_complexity Low_complexity 72 90 0 1 621 186 43 0 0 chrX 4795267 4795290 -17627537 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 621 226 247 11 22 chrX 4795290 4795361 -17627466 + T-rich Low_complexity Low_complexity 2 71 0 1 621 201 74 0 0 chrX 4797388 4797415 -17625412 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 621 288 0 0 0 chrX 4797698 4797730 -17625097 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 621 23 0 0 0 chrX 4800317 4800340 -17622487 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 33 0 0 0 chrX 4802916 4802949 -17619878 + AT_rich Low_complexity Low_complexity 1 33 0 1 621 209 204 20 0 chrX 4804014 4804063 -17618764 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 621 242 304 9 9 chrX 4804968 4805081 -17617746 + (CCG)n Simple_repeat Simple_repeat 3 115 0 1 621 289 187 0 0 chrX 4805081 4805156 -17617671 + ROO_I LTR Pao 643 717 -7539 1 621 21 57 0 0 chrX 4805421 4805456 -17617371 + AT_rich Low_complexity Low_complexity 1 35 0 1 621 345 109 0 0 chrX 4806209 4806264 -17616563 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 621 33 0 0 0 chrX 4806408 4806441 -17616386 + AT_rich Low_complexity Low_complexity 1 33 0 1 621 301 105 40 40 chrX 4808020 4808119 -17614708 + (CAG)n Simple_repeat Simple_repeat 3 101 0 1 621 360 185 12 36 chrX 4808387 4808471 -17614356 - DNAREP1_DM LINE Penelope 0 594 513 1 621 206 79 26 26 chrX 4808995 4809034 -17613793 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 1 621 22 0 0 0 chrX 4809143 4809165 -17613662 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 26 30 0 0 chrX 4809253 4809286 -17613541 + AT_rich Low_complexity Low_complexity 1 33 0 1 621 22 35 0 0 chrX 4812416 4812445 -17610382 + AT_rich Low_complexity Low_complexity 1 29 0 1 621 23 0 0 0 chrX 4815695 4815718 -17607109 + AT_rich Low_complexity Low_complexity 1 23 0 1 621 28 0 0 0 chrX 4822173 4822201 -17600626 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 237 265 0 0 chrX 4823729 4823861 -17598966 + T-rich Low_complexity Low_complexity 1 132 0 1 621 28 0 0 0 chrX 4825677 4825705 -17597122 + AT_rich Low_complexity Low_complexity 1 28 0 1 621 23 33 0 0 chrX 4829464 4829494 -17593333 + AT_rich Low_complexity Low_complexity 1 30 0 1 621 180 0 0 0 chrX 4830097 4830117 -17592710 + (T)n Simple_repeat Simple_repeat 1 20 0 1 621 192 77 0 0 chrX 4831477 4831503 -17591324 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 621 28 48 0 0 chrX 4832293 4832335 -17590492 + AT_rich Low_complexity Low_complexity 1 42 0 1 621 34 0 0 0 chrX 4832571 4832605 -17590222 + AT_rich Low_complexity Low_complexity 1 34 0 1 621 32 43 0 0 chrX 4832755 4832801 -17590026 + AT_rich Low_complexity Low_complexity 1 46 0 1 621 26 74 0 0 chrX 4832997 4833051 -17589776 + AT_rich Low_complexity Low_complexity 1 54 0 1 621 220 232 18 0 chrX 4833503 4833559 -17589268 + GA-rich Low_complexity Low_complexity 3 59 0 1 621 277 296 7 7 chrX 4834698 4834834 -17587993 + (CAA)n Simple_repeat Simple_repeat 2 137 0 1 621 205 190 0 23 chrX 4835645 4835688 -17587139 + (TTTCG)n Simple_repeat Simple_repeat 2 43 0 1 621 22 0 0 0 chrX 4835921 4835943 -17586884 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 24 0 0 0 chrX 4836305 4836329 -17586498 + AT_rich Low_complexity Low_complexity 1 24 0 1 621 221 119 0 23 chrX 4837353 4837396 -17585431 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 621 201 74 0 0 chrX 4837900 4837927 -17584900 + (CATA)n Simple_repeat Simple_repeat 3 29 0 1 621 230 190 17 0 chrX 4838379 4838437 -17584390 + T-rich Low_complexity Low_complexity 2 60 0 1 621 22 70 0 0 chrX 4839275 4839318 -17583509 + AT_rich Low_complexity Low_complexity 1 43 0 1 621 201 164 18 35 chrX 4839876 4839933 -17582894 + T-rich Low_complexity Low_complexity 2 57 0 1 621 189 0 0 0 chrX 4840661 4840682 -17582145 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 621 192 40 0 0 chrX 4841530 4841555 -17581272 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 621 195 69 0 0 chrX 4842852 4842881 -17579946 + (T)n Simple_repeat Simple_repeat 1 29 0 1 621 22 0 0 0 chrX 4847858 4847880 -17574947 + AT_rich Low_complexity Low_complexity 1 22 0 1 621 213 65 0 0 chrX 4848274 4848305 -17574522 + (CAG)n Simple_repeat Simple_repeat 1 31 0 1 621 210 156 0 0 chrX 4848337 4848382 -17574445 + (CGA)n Simple_repeat Simple_repeat 2 46 0 1 622 279 104 0 0 chrX 4849791 4849839 -17572988 + (CAGTA)n Simple_repeat Simple_repeat 2 49 0 1 622 246 143 0 0 chrX 4849855 4849904 -17572923 + (TATTG)n Simple_repeat Simple_repeat 2 50 0 1 622 264 119 0 0 chrX 4850311 4850353 -17572474 + RSP Satellite Satellite 70 111 -7 1 622 48 0 0 0 chrX 4850615 4850663 -17572164 + AT_rich Low_complexity Low_complexity 1 48 0 1 622 271 225 0 36 chrX 4852939 4853022 -17569805 + (CAG)n Simple_repeat Simple_repeat 1 80 0 1 622 180 0 0 0 chrX 4853508 4853528 -17569299 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 622 359 113 16 0 chrX 4853631 4853693 -17569134 + (CTG)n Simple_repeat Simple_repeat 3 65 0 1 622 23 0 0 0 chrX 4855114 4855137 -17567690 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 228 294 0 0 chrX 4855395 4855463 -17567364 + A-rich Low_complexity Low_complexity 5 72 0 1 622 216 67 0 0 chrX 4856888 4856918 -17565909 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1 622 229 213 0 0 chrX 4857379 4857426 -17565401 + (GATTG)n Simple_repeat Simple_repeat 5 51 0 1 622 555 96 0 0 chrX 4857455 4857538 -17565289 + (CAGT)n Simple_repeat Simple_repeat 2 84 0 1 622 252 77 0 0 chrX 4857798 4857837 -17564990 + (GTATG)n Simple_repeat Simple_repeat 5 43 0 1 622 985 287 54 31 chrX 4858530 4859141 -17563686 - SAR_DM Satellite Satellite -630 842 218 1 622 201 245 0 0 chrX 4859637 4859686 -17563141 + A-rich Low_complexity Low_complexity 2 50 0 1 622 213 39 0 0 chrX 4859774 4859800 -17563027 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 622 204 40 0 0 chrX 4861286 4861311 -17561516 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 622 249 250 0 43 chrX 4861315 4861407 -17561420 + (TTTCG)n Simple_repeat Simple_repeat 3 90 0 1 622 248 0 31 0 chrX 4865864 4865896 -17556931 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 622 280 64 0 41 chrX 4866191 4866240 -17556587 + (CAG)n Simple_repeat Simple_repeat 1 47 0 1 622 279 54 0 0 chrX 4866359 4866396 -17556431 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1 622 202 333 21 0 chrX 4867121 4867217 -17555610 + (CAG)n Simple_repeat Simple_repeat 1 98 0 1 622 213 39 0 0 chrX 4867396 4867422 -17555405 + (A)n Simple_repeat Simple_repeat 1 26 0 1 622 21 0 0 0 chrX 4870204 4870225 -17552602 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 22 0 0 0 chrX 4870285 4870307 -17552520 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 280 257 0 0 chrX 4870573 4870643 -17552184 + (CAATC)n Simple_repeat Simple_repeat 3 72 0 1 622 308 64 0 21 chrX 4871066 4871114 -17551713 + (CCAA)n Simple_repeat Simple_repeat 2 48 0 1 622 24 0 0 0 chrX 4871671 4871695 -17551132 + AT_rich Low_complexity Low_complexity 1 24 0 1 622 27 29 0 0 chrX 4874443 4874477 -17548350 + AT_rich Low_complexity Low_complexity 1 34 0 1 622 189 0 0 0 chrX 4875398 4875419 -17547408 + (T)n Simple_repeat Simple_repeat 1 21 0 1 622 180 111 0 0 chrX 4875835 4875862 -17546965 + (T)n Simple_repeat Simple_repeat 1 27 0 1 622 204 111 0 0 chrX 4875923 4875959 -17546868 + (CACAG)n Simple_repeat Simple_repeat 3 38 0 1 622 198 192 0 0 chrX 4876933 4876985 -17545842 + T-rich Low_complexity Low_complexity 1 52 0 1 622 206 190 0 23 chrX 4878040 4878083 -17544744 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 622 209 208 0 0 chrX 4879567 4879615 -17543212 + T-rich Low_complexity Low_complexity 1 48 0 1 622 189 0 0 0 chrX 4880808 4880829 -17541998 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 622 228 111 0 0 chrX 4881195 4881231 -17541596 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 622 213 39 0 0 chrX 4882840 4882866 -17539961 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 622 318 50 0 0 chrX 4883758 4883798 -17539029 + (CAACT)n Simple_repeat Simple_repeat 2 41 0 1 622 30 0 0 0 chrX 4883993 4884023 -17538804 + AT_rich Low_complexity Low_complexity 1 30 0 1 622 3729 5 0 0 chrX 4884131 4884559 -17538268 - ROO_LTR LTR Pao 0 428 1 1 622 4456 7 2 0 chrX 4884559 4885117 -17537710 - ROO_I LTR Pao 0 8256 7698 1 622 36234 0 0 0 chrX 4885089 4889813 -17533014 + ROO_I LTR Pao 1050 5773 -2483 1 622 9247 2 9 2 chrX 4889788 4890859 -17531968 - ROO_I LTR Pao -7177 1079 1 1 622 3893 5 0 0 chrX 4890859 4891287 -17531540 - ROO_LTR LTR Pao 0 428 1 1 622 192 152 0 0 chrX 4893013 4893046 -17529781 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 622 21 57 0 0 chrX 4893901 4893936 -17528891 + AT_rich Low_complexity Low_complexity 1 35 0 1 622 22 0 0 0 chrX 4897564 4897586 -17525241 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 183 80 0 0 chrX 4898448 4898473 -17524354 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 622 290 159 0 31 chrX 4898704 4898769 -17524058 + (TATG)n Simple_repeat Simple_repeat 3 65 0 1 622 189 74 0 0 chrX 4898965 4898992 -17523835 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 622 199 54 54 0 chrX 4899743 4899780 -17523047 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 1 622 234 0 0 0 chrX 4901038 4901064 -17521763 + (T)n Simple_repeat Simple_repeat 1 26 0 1 622 224 193 0 34 chrX 4901202 4901261 -17521566 + (TTGG)n Simple_repeat Simple_repeat 4 60 0 1 622 25 0 0 0 chrX 4901297 4901322 -17521505 + AT_rich Low_complexity Low_complexity 1 25 0 1 622 189 0 0 0 chrX 4901440 4901461 -17521366 + (CGATA)n Simple_repeat Simple_repeat 5 25 0 1 622 425 294 42 42 chrX 4901919 4902278 -17520549 + XDMR Unknown Unknown 1 359 -2 1 622 422 321 42 45 chrX 4902001 4902428 -17520399 - SAR_DM Satellite Satellite -481 991 566 1 622 309 68 0 0 chrX 4902842 4902886 -17519941 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 622 21 0 0 0 chrX 4903636 4903657 -17519170 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 292 208 0 0 chrX 4904491 4904539 -17518288 + (CGA)n Simple_repeat Simple_repeat 3 50 0 1 622 201 94 0 0 chrX 4904565 4904597 -17518230 + (T)n Simple_repeat Simple_repeat 1 32 0 1 622 207 69 0 0 chrX 4905353 4905382 -17517445 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 622 189 74 0 0 chrX 4909080 4909107 -17513720 + (T)n Simple_repeat Simple_repeat 1 27 0 1 622 263 71 24 0 chrX 4909542 4909584 -17513243 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 622 189 171 0 0 chrX 4910883 4910918 -17511909 + C-rich Low_complexity Low_complexity 1 35 0 1 622 215 236 0 0 chrX 4911632 4911687 -17511140 + A-rich Low_complexity Low_complexity 1 55 0 1 622 192 40 0 0 chrX 4911687 4911712 -17511115 + (TTGG)n Simple_repeat Simple_repeat 1 25 0 1 622 189 0 0 0 chrX 4912043 4912064 -17510763 + (T)n Simple_repeat Simple_repeat 1 21 0 1 622 216 196 0 19 chrX 4913145 4913197 -17509630 + A-rich Low_complexity Low_complexity 1 51 0 1 622 248 53 26 0 chrX 4913615 4913653 -17509174 + (ATTCG)n Simple_repeat Simple_repeat 4 42 0 1 622 28 48 0 0 chrX 4914234 4914276 -17508551 + AT_rich Low_complexity Low_complexity 1 42 0 1 622 201 121 0 0 chrX 4916343 4916376 -17506451 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1 622 213 94 0 0 chrX 4916636 4916668 -17506159 + (T)n Simple_repeat Simple_repeat 1 32 0 1 622 21 36 0 0 chrX 4917215 4917243 -17505584 + AT_rich Low_complexity Low_complexity 1 28 0 1 622 458 199 27 34 chrX 4918277 4918423 -17504404 - XDMR_DM Unknown Unknown -214 146 2 1 622 462 266 49 62 chrX 4918358 4918602 -17504225 + SAR_DM Satellite Satellite 619 859 -613 1 622 28 0 0 0 chrX 4919304 4919332 -17503495 + AT_rich Low_complexity Low_complexity 1 28 0 1 622 26 0 0 0 chrX 4919478 4919504 -17503323 + AT_rich Low_complexity Low_complexity 1 26 0 1 622 22 0 0 0 chrX 4921525 4921547 -17501280 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 28 0 0 0 chrX 4921558 4921586 -17501241 + AT_rich Low_complexity Low_complexity 1 28 0 1 622 252 247 23 12 chrX 4923265 4923351 -17499476 + A-rich Low_complexity Low_complexity 5 91 0 1 622 211 220 0 0 chrX 4923432 4923482 -17499345 + T-rich Low_complexity Low_complexity 1 50 0 1 622 206 62 31 0 chrX 4923532 4923564 -17499263 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 1 622 288 143 0 0 chrX 4924146 4924202 -17498625 + (CATA)n Simple_repeat Simple_repeat 3 58 0 1 622 45 62 0 0 chrX 4924249 4924329 -17498498 + AT_rich Low_complexity Low_complexity 1 80 0 1 622 21 0 0 0 chrX 4924366 4924387 -17498440 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 249 83 0 0 chrX 4924723 4924759 -17498068 + (AAATG)n Simple_repeat Simple_repeat 4 39 0 1 622 21 0 0 0 chrX 4924894 4924915 -17497912 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 189 74 0 0 chrX 4925725 4925752 -17497075 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 622 198 91 0 0 chrX 4926553 4926586 -17496241 + (T)n Simple_repeat Simple_repeat 1 33 0 1 622 204 125 0 0 chrX 4927511 4927543 -17495284 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 622 23 0 0 0 chrX 4928145 4928168 -17494659 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 261 83 0 0 chrX 4928787 4928823 -17494004 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1 622 186 71 0 0 chrX 4933792 4933820 -17489007 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 622 35 83 0 0 chrX 4933862 4933946 -17488881 + AT_rich Low_complexity Low_complexity 1 84 0 1 622 189 0 0 0 chrX 4934671 4934692 -17488135 + (T)n Simple_repeat Simple_repeat 1 21 0 1 622 192 77 0 0 chrX 4935375 4935401 -17487426 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1 622 28 0 0 0 chrX 4935418 4935446 -17487381 + AT_rich Low_complexity Low_complexity 1 28 0 1 622 229 348 0 0 chrX 4935981 4936142 -17486685 + A-rich Low_complexity Low_complexity 1 161 0 1 622 239 54 27 0 chrX 4936220 4936257 -17486570 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 622 25 0 0 0 chrX 4937211 4937236 -17485591 + AT_rich Low_complexity Low_complexity 1 25 0 1 622 279 79 0 0 chrX 4938346 4938384 -17484443 + (CAT)n Simple_repeat Simple_repeat 2 39 0 1 622 252 100 0 0 chrX 4938901 4938941 -17483886 + (TTG)n Simple_repeat Simple_repeat 3 42 0 1 622 195 114 0 0 chrX 4939234 4939269 -17483558 + (A)n Simple_repeat Simple_repeat 1 35 0 1 622 24 32 0 0 chrX 4939303 4939334 -17483493 + AT_rich Low_complexity Low_complexity 1 31 0 1 622 220 143 24 0 chrX 4939868 4939910 -17482917 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 622 22 70 0 0 chrX 4941802 4941845 -17480982 + AT_rich Low_complexity Low_complexity 1 43 0 1 622 26 0 0 0 chrX 4944059 4944085 -17478742 + AT_rich Low_complexity Low_complexity 1 26 0 1 622 211 254 16 16 chrX 4944111 4944175 -17478652 + T-rich Low_complexity Low_complexity 5 68 0 1 622 219 114 0 0 chrX 4945671 4945706 -17477121 + (CCGAA)n Simple_repeat Simple_repeat 2 36 0 1 622 213 39 0 0 chrX 4947065 4947091 -17475736 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 622 186 128 0 0 chrX 4947128 4947167 -17475660 + (GAA)n Simple_repeat Simple_repeat 3 41 0 1 622 206 237 17 0 chrX 4947272 4947331 -17475496 + GA-rich Low_complexity Low_complexity 1 60 0 1 622 207 69 0 0 chrX 4947346 4947375 -17475452 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 622 210 139 0 0 chrX 4949453 4949489 -17473338 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1 622 301 244 0 35 chrX 4949515 4949600 -17473227 + (TATG)n Simple_repeat Simple_repeat 3 84 0 1 622 219 36 0 0 chrX 4949937 4949965 -17472862 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 622 222 91 0 0 chrX 4950079 4950112 -17472715 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1 622 255 103 0 0 chrX 4950206 4950245 -17472582 + (A)n Simple_repeat Simple_repeat 1 39 0 1 622 224 176 59 0 chrX 4950571 4950622 -17472205 + T-rich Low_complexity Low_complexity 6 59 0 1 622 222 62 0 0 chrX 4951361 4951393 -17471434 + (T)n Simple_repeat Simple_repeat 1 32 0 1 622 225 108 0 0 chrX 4951996 4952033 -17470794 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 622 21 36 0 0 chrX 4953944 4953972 -17468855 + AT_rich Low_complexity Low_complexity 1 28 0 1 622 204 40 0 0 chrX 4954161 4954186 -17468641 + (A)n Simple_repeat Simple_repeat 1 25 0 1 622 23 0 0 0 chrX 4954624 4954647 -17468180 + AT_rich Low_complexity Low_complexity 1 23 0 1 622 39 22 0 0 chrX 4955575 4955621 -17467206 + AT_rich Low_complexity Low_complexity 1 46 0 1 622 261 83 0 0 chrX 4957593 4957629 -17465198 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 622 326 336 0 0 chrX 4958658 4958795 -17464032 + GA-rich Low_complexity Low_complexity 2 138 0 1 622 210 71 0 0 chrX 4959865 4959893 -17462934 + (TGG)n Simple_repeat Simple_repeat 3 30 0 1 622 198 0 0 0 chrX 4960030 4960052 -17462775 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1 622 256 135 0 179 chrX 4960579 4960696 -17462131 + ROO_I LTR Pao 639 734 -7522 1 622 273 146 40 101 chrX 4960775 4960874 -17461953 + ROO_I LTR Pao 637 729 -7527 1 622 318 186 0 103 chrX 4960883 4961009 -17461818 + ROO_I LTR Pao 637 749 -7507 1 622 256 196 0 0 chrX 4961071 4961127 -17461700 + (CTG)n Simple_repeat Simple_repeat 2 57 0 1 622 249 210 0 0 chrX 4961145 4961207 -17461620 + (CAG)n Simple_repeat Simple_repeat 2 63 0 1 622 282 200 0 0 chrX 4961475 4961555 -17461272 + ROO_I LTR Pao 649 728 -7528 1 622 230 240 8 0 chrX 4962317 4962452 -17460375 + (CAG)n Simple_repeat Simple_repeat 1 136 0 1 622 21 0 0 0 chrX 4963597 4963618 -17459209 + AT_rich Low_complexity Low_complexity 1 21 0 1 622 197 83 28 0 chrX 4964587 4964623 -17458204 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 622 22 35 0 0 chrX 4964795 4964824 -17458003 + AT_rich Low_complexity Low_complexity 1 29 0 1 622 22 56 0 0 chrX 4965048 4965084 -17457743 + AT_rich Low_complexity Low_complexity 1 36 0 1 622 250 307 0 43 chrX 4965090 4965277 -17457550 + T-rich Low_complexity Low_complexity 1 179 0 1 622 22 0 0 0 chrX 4965371 4965393 -17457434 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 302 152 0 17 chrX 4966323 4966383 -17456444 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 622 37 39 0 0 chrX 4966844 4966895 -17455932 + AT_rich Low_complexity Low_complexity 1 51 0 1 622 21 36 0 0 chrX 4967457 4967485 -17455342 + AT_rich Low_complexity Low_complexity 1 28 0 1 622 26 74 0 0 chrX 4967602 4967656 -17455171 + AT_rich Low_complexity Low_complexity 1 54 0 1 622 25 0 0 0 chrX 4968380 4968405 -17454422 + AT_rich Low_complexity Low_complexity 1 25 0 1 622 22 0 0 0 chrX 4968504 4968526 -17454301 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 31 26 0 0 chrX 4968712 4968750 -17454077 + AT_rich Low_complexity Low_complexity 1 38 0 1 622 277 109 0 30 chrX 4968842 4968908 -17453919 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 622 22 0 0 0 chrX 4969026 4969048 -17453779 + AT_rich Low_complexity Low_complexity 1 22 0 1 622 242 260 0 0 chrX 4969971 4970086 -17452741 + GA-rich Low_complexity Low_complexity 1 115 0 1 622 21 71 0 0 chrX 4970396 4970438 -17452389 + AT_rich Low_complexity Low_complexity 1 42 0 1 622 200 79 0 50 chrX 4971010 4971025 -17451802 + (TCC)n Simple_repeat Simple_repeat 3 16 0 1 622 228 86 0 0 chrX 4971025 4971060 -17451767 + (CTG)n Simple_repeat Simple_repeat 2 36 0 1 622 200 79 0 50 chrX 4971060 4971084 -17451743 + (TCC)n Simple_repeat Simple_repeat 3 26 0 1 622 222 156 0 0 chrX 4971682 4971727 -17451100 + (ATG)n Simple_repeat Simple_repeat 1 45 0 1 622 262 82 0 58 chrX 4971852 4971904 -17450923 + (CTG)n Simple_repeat Simple_repeat 1 49 0 1 622 226 356 0 0 chrX 4972250 4972351 -17450476 + (CTG)n Simple_repeat Simple_repeat 3 103 0 1 622 294 29 0 0 chrX 4972404 4972439 -17450388 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 622 248 98 0 56 chrX 4972500 4972554 -17450273 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 622 240 206 17 136 chrX 4972835 4972953 -17449874 - ROO_I LTR Pao -7504 752 649 1 622 242 242 15 0 chrX 4973595 4973661 -17449166 + (TTG)n Simple_repeat Simple_repeat 1 67 0 1 622 261 119 0 0 chrX 4973700 4973742 -17449085 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 622 304 147 0 56 chrX 4973746 4973854 -17448973 - ROO_I LTR Pao -7513 743 642 1 622 222 254 0 0 chrX 4974290 4974357 -17448470 + CT-rich Low_complexity Low_complexity 1 67 0 1 622 192 77 0 0 chrX 4974564 4974590 -17448237 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 622 260 164 0 52 chrX 4974599 4974657 -17448170 - Gypsy11_I LTR Gypsy -2947 577 523 1 622 279 204 0 30 chrX 4974670 4974771 -17448056 - ROO_I LTR Pao -7518 738 641 1 622 281 185 0 0 chrX 4974790 4974855 -17447972 - ROO_I LTR Pao -7513 743 679 1 622 213 39 0 0 chrX 4975852 4975878 -17446949 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 622 261 197 15 0 chrX 4976758 4976824 -17446003 + CT-rich Low_complexity Low_complexity 1 67 0 1 622 28 71 0 0 chrX 4977369 4977425 -17445402 + AT_rich Low_complexity Low_complexity 1 56 0 1 622 30 45 0 0 chrX 4978436 4978480 -17444347 + AT_rich Low_complexity Low_complexity 1 44 0 1 622 210 200 0 22 chrX 4978528 4978574 -17444253 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 622 191 61 0 29 chrX 4979977 4980011 -17442816 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 1 622 248 254 16 0 chrX 4980153 4980216 -17442611 + (CAA)n Simple_repeat Simple_repeat 3 66 0 1 622 198 176 0 0 chrX 4980616 4980667 -17442160 + GA-rich Low_complexity Low_complexity 3 53 0 1 623 201 128 0 49 chrX 4980755 4980796 -17442031 + A-rich Low_complexity Low_complexity 5 43 0 1 623 183 162 0 0 chrX 4981391 4981428 -17441399 + CT-rich Low_complexity Low_complexity 1 37 0 1 623 29 60 0 0 chrX 4981606 4981656 -17441171 + AT_rich Low_complexity Low_complexity 1 50 0 1 623 297 51 0 0 chrX 4982683 4982722 -17440105 + (A)n Simple_repeat Simple_repeat 1 39 0 1 623 255 31 0 0 chrX 4983279 4983311 -17439516 + (CCA)n Simple_repeat Simple_repeat 1 32 0 1 623 21 0 0 0 chrX 4983400 4983421 -17439406 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 267 175 0 0 chrX 4983507 4983564 -17439263 + (CAA)n Simple_repeat Simple_repeat 3 59 0 1 623 214 132 39 26 chrX 4983712 4983790 -17439037 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 623 210 105 0 0 chrX 4983854 4983892 -17438935 + (A)n Simple_repeat Simple_repeat 1 38 0 1 623 189 0 0 0 chrX 4985895 4985916 -17436911 + (TCG)n Simple_repeat Simple_repeat 3 23 0 1 623 180 158 0 0 chrX 4986049 4986087 -17436740 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 1 623 186 43 0 0 chrX 4986203 4986226 -17436601 + (A)n Simple_repeat Simple_repeat 1 23 0 1 623 242 228 0 0 chrX 4987846 4987903 -17434924 + ROO_I LTR Pao 673 729 -7527 1 623 28 71 0 0 chrX 4988932 4988988 -17433839 + AT_rich Low_complexity Low_complexity 1 56 0 1 623 22 0 0 0 chrX 4989097 4989119 -17433708 + AT_rich Low_complexity Low_complexity 1 22 0 1 623 183 167 0 0 chrX 4989332 4989374 -17433453 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 623 2200 108 57 62 chrX 4990360 4990766 -17432061 - Gypsy6_LTR LTR Gypsy -3 404 1 1 623 18138 229 18 25 chrX 4990768 4997450 -17425377 - Gypsy6_I LTR Gypsy 0 7012 27 1 623 2179 108 57 62 chrX 4997466 4997870 -17424957 - Gypsy6_LTR LTR Gypsy -5 402 1 1 623 22 56 0 0 chrX 4997895 4997931 -17424896 + AT_rich Low_complexity Low_complexity 1 36 0 1 623 212 297 0 13 chrX 4998104 4998179 -17424648 + GA-rich Low_complexity Low_complexity 2 75 0 1 623 225 0 0 0 chrX 4998380 4998405 -17424422 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1 623 654 13 0 0 chrX 4999517 4999592 -17423235 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 623 183 100 0 0 chrX 4999777 4999807 -17423020 + (A)n Simple_repeat Simple_repeat 1 30 0 1 623 252 77 0 0 chrX 5000406 5000445 -17422382 + (T)n Simple_repeat Simple_repeat 1 39 0 1 623 200 143 24 0 chrX 5001047 5001089 -17421738 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 623 189 0 0 0 chrX 5001120 5001141 -17421686 + (AAATG)n Simple_repeat Simple_repeat 5 25 0 1 623 219 36 0 0 chrX 5002305 5002333 -17420494 + (CAAAC)n Simple_repeat Simple_repeat 1 28 0 1 623 251 191 32 0 chrX 5002914 5002977 -17419850 + T-rich Low_complexity Low_complexity 1 65 0 1 623 221 170 38 0 chrX 5003183 5003236 -17419591 + (CACCAT)n Simple_repeat Simple_repeat 6 60 0 1 623 202 154 0 25 chrX 5003398 5003438 -17419389 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 623 201 108 0 0 chrX 5003767 5003804 -17419023 + (TCC)n Simple_repeat Simple_repeat 1 37 0 1 623 198 91 0 0 chrX 5004834 5004867 -17417960 + (T)n Simple_repeat Simple_repeat 1 33 0 1 623 189 0 0 0 chrX 5004993 5005014 -17417813 + (A)n Simple_repeat Simple_repeat 1 21 0 1 623 201 167 0 0 chrX 5006153 5006189 -17416638 + (TTTAA)n Simple_repeat Simple_repeat 4 39 0 1 623 25 0 0 0 chrX 5006436 5006461 -17416366 + AT_rich Low_complexity Low_complexity 1 25 0 1 623 25 0 0 0 chrX 5007894 5007919 -17414908 + AT_rich Low_complexity Low_complexity 1 25 0 1 623 207 69 0 0 chrX 5008788 5008817 -17414010 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 623 317 136 15 0 chrX 5008981 5009047 -17413780 + GA-rich Low_complexity Low_complexity 1 67 0 1 623 183 42 0 0 chrX 5009204 5009228 -17413599 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 623 249 109 0 0 chrX 5010622 5010668 -17412159 + (A)n Simple_repeat Simple_repeat 1 46 0 1 623 221 98 0 24 chrX 5011747 5011789 -17411038 + (CCAA)n Simple_repeat Simple_repeat 2 42 0 1 623 201 267 16 16 chrX 5012290 5012351 -17410476 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 623 506 119 0 12 chrX 5012458 5012543 -17410284 + (CAAAC)n Simple_repeat Simple_repeat 1 84 0 1 623 201 263 0 0 chrX 5013746 5013803 -17409024 + T-rich Low_complexity Low_complexity 4 60 0 1 623 201 196 0 0 chrX 5015154 5015200 -17407627 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 623 203 122 0 47 chrX 5015808 5015851 -17406976 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 623 227 79 0 26 chrX 5015913 5015952 -17406875 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 623 195 42 0 0 chrX 5017804 5017828 -17404999 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 623 225 0 0 0 chrX 5018517 5018542 -17404285 + (CAGT)n Simple_repeat Simple_repeat 3 27 0 1 623 249 33 0 0 chrX 5018609 5018639 -17404188 + (TCTCTG)n Simple_repeat Simple_repeat 6 35 0 1 623 243 173 0 0 chrX 5018743 5018795 -17404032 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 1 623 21 0 0 0 chrX 5019276 5019297 -17403530 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 198 0 0 0 chrX 5019780 5019802 -17403025 + (T)n Simple_repeat Simple_repeat 1 22 0 1 623 21 36 0 0 chrX 5020428 5020456 -17402371 + AT_rich Low_complexity Low_complexity 1 28 0 1 623 216 0 0 0 chrX 5021067 5021091 -17401736 + (A)n Simple_repeat Simple_repeat 1 24 0 1 623 268 219 24 24 chrX 5021511 5021595 -17401232 + (TATATG)n Simple_repeat Simple_repeat 6 89 0 1 623 219 125 0 0 chrX 5022087 5022127 -17400700 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 623 180 0 0 0 chrX 5022178 5022198 -17400629 + (T)n Simple_repeat Simple_repeat 1 20 0 1 623 220 275 19 38 chrX 5023783 5023889 -17398938 + A-rich Low_complexity Low_complexity 3 106 0 1 623 180 125 0 0 chrX 5024413 5024445 -17398382 + (T)n Simple_repeat Simple_repeat 1 32 0 1 623 197 65 0 31 chrX 5024704 5024736 -17398091 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 1 623 258 314 8 8 chrX 5025100 5025222 -17397605 + (CAAAT)n Simple_repeat Simple_repeat 4 125 0 1 623 22 0 0 0 chrX 5025302 5025324 -17397503 + AT_rich Low_complexity Low_complexity 1 22 0 1 623 208 139 0 0 chrX 5026564 5026600 -17396227 + (CATATA)n Simple_repeat Simple_repeat 4 39 0 1 623 27 29 0 0 chrX 5026977 5027011 -17395816 + AT_rich Low_complexity Low_complexity 1 34 0 1 623 218 357 0 0 chrX 5027195 5027324 -17395503 + A-rich Low_complexity Low_complexity 1 129 0 1 623 23 0 0 0 chrX 5028901 5028924 -17393903 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 249 128 0 0 chrX 5032280 5032327 -17390500 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 623 261 0 0 0 chrX 5032718 5032747 -17390080 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 623 26 0 0 0 chrX 5033081 5033107 -17389720 + AT_rich Low_complexity Low_complexity 1 26 0 1 623 207 114 0 0 chrX 5033593 5033628 -17389199 + (AGTTG)n Simple_repeat Simple_repeat 2 36 0 1 623 21 0 0 0 chrX 5034565 5034586 -17388241 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 204 97 0 0 chrX 5034814 5034845 -17387982 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 623 22 0 0 0 chrX 5035594 5035616 -17387211 + AT_rich Low_complexity Low_complexity 1 22 0 1 623 600 106 0 0 chrX 5036437 5036531 -17386296 + (A)n Simple_repeat Simple_repeat 1 94 0 1 623 222 91 0 0 chrX 5036725 5036758 -17386069 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 623 227 191 0 0 chrX 5037565 5037607 -17385220 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 623 282 148 0 0 chrX 5038644 5038698 -17384129 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 623 25 0 0 0 chrX 5039215 5039240 -17383587 + AT_rich Low_complexity Low_complexity 1 25 0 1 623 237 222 0 0 chrX 5039419 5039482 -17383345 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 623 193 109 21 21 chrX 5039746 5039793 -17383034 + CT-rich Low_complexity Low_complexity 1 47 0 1 623 242 206 0 14 chrX 5039889 5039963 -17382864 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 623 246 62 0 0 chrX 5040662 5040694 -17382133 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 623 225 0 0 0 chrX 5041151 5041176 -17381651 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 623 228 143 0 0 chrX 5042172 5042214 -17380613 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 623 216 135 0 0 chrX 5042363 5042400 -17380427 + (T)n Simple_repeat Simple_repeat 1 37 0 1 623 26 0 0 0 chrX 5042983 5043009 -17379818 + AT_rich Low_complexity Low_complexity 1 26 0 1 623 189 0 0 0 chrX 5043333 5043354 -17379473 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1 623 191 151 57 0 chrX 5043642 5043695 -17379132 + T-rich Low_complexity Low_complexity 2 57 0 1 623 220 268 0 0 chrX 5044136 5044192 -17378635 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 623 261 146 0 0 chrX 5044514 5044562 -17378265 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 623 200 86 29 0 chrX 5044904 5044939 -17377888 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 623 213 39 0 0 chrX 5044950 5044976 -17377851 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 623 237 139 0 0 chrX 5045982 5046025 -17376802 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 623 29 0 0 0 chrX 5046245 5046274 -17376553 + AT_rich Low_complexity Low_complexity 1 29 0 1 623 206 239 45 0 chrX 5046328 5046395 -17376432 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 623 26 30 0 0 chrX 5047177 5047210 -17375617 + AT_rich Low_complexity Low_complexity 1 33 0 1 623 219 114 0 0 chrX 5047891 5047926 -17374901 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 623 226 167 21 0 chrX 5048060 5048108 -17374719 + T-rich Low_complexity Low_complexity 6 54 0 1 623 303 216 0 56 chrX 5048773 5048881 -17373946 - ROO_I LTR Pao -7513 743 642 1 623 233 29 29 0 chrX 5048964 5048998 -17373829 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 623 219 69 0 0 chrX 5049346 5049375 -17373452 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 623 30 27 0 0 chrX 5050368 5050405 -17372422 + AT_rich Low_complexity Low_complexity 1 37 0 1 623 22 35 0 0 chrX 5051116 5051145 -17371682 + AT_rich Low_complexity Low_complexity 1 29 0 1 623 180 77 0 0 chrX 5052381 5052407 -17370420 + (A)n Simple_repeat Simple_repeat 1 26 0 1 623 186 43 0 0 chrX 5052681 5052704 -17370123 + (T)n Simple_repeat Simple_repeat 1 23 0 1 623 23 0 0 0 chrX 5053041 5053064 -17369763 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 273 29 0 0 chrX 5054257 5054291 -17368536 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 623 24 67 0 0 chrX 5054741 5054786 -17368041 + AT_rich Low_complexity Low_complexity 1 45 0 1 623 225 132 0 0 chrX 5054978 5055016 -17367811 + (A)n Simple_repeat Simple_repeat 1 38 0 1 623 267 177 0 0 chrX 5055580 5055642 -17367185 + GA-rich Low_complexity Low_complexity 1 62 0 1 623 207 114 0 0 chrX 5056316 5056351 -17366476 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 623 204 111 0 0 chrX 5056736 5056772 -17366055 + (T)n Simple_repeat Simple_repeat 1 36 0 1 623 21 0 0 0 chrX 5058058 5058079 -17364748 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 204 143 0 0 chrX 5058240 5058282 -17364545 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 623 180 217 0 0 chrX 5059068 5059114 -17363713 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 623 299 141 16 0 chrX 5059200 5059264 -17363563 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 623 189 131 16 32 chrX 5059391 5059454 -17363373 + A-rich Low_complexity Low_complexity 2 63 0 1 623 30 0 0 0 chrX 5059840 5059870 -17362957 + AT_rich Low_complexity Low_complexity 1 30 0 1 623 222 37 0 0 chrX 5060007 5060034 -17362793 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 623 205 254 0 0 chrX 5060152 5060207 -17362620 + (CAA)n Simple_repeat Simple_repeat 1 55 0 1 623 180 0 0 0 chrX 5060209 5060229 -17362598 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 623 286 151 27 0 chrX 5060878 5060951 -17361876 + (TTG)n Simple_repeat Simple_repeat 3 77 0 1 623 371 145 12 0 chrX 5061124 5061207 -17361620 + (TA)n Simple_repeat Simple_repeat 1 84 0 1 623 186 167 0 0 chrX 5061500 5061536 -17361291 + T-rich Low_complexity Low_complexity 1 36 0 1 623 189 121 0 0 chrX 5062014 5062047 -17360780 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 623 336 102 0 0 chrX 5062478 5062527 -17360300 + (TTTG)n Simple_repeat Simple_repeat 4 52 0 1 623 261 57 0 0 chrX 5062954 5062989 -17359838 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 623 201 176 0 0 chrX 5063715 5063749 -17359078 + A-rich Low_complexity Low_complexity 1 34 0 1 623 180 125 0 0 chrX 5064852 5064884 -17357943 + (TATG)n Simple_repeat Simple_repeat 1 32 0 1 623 27 0 0 0 chrX 5065952 5065979 -17356848 + AT_rich Low_complexity Low_complexity 1 27 0 1 623 222 150 0 0 chrX 5066307 5066347 -17356480 + (TCTCCC)n Simple_repeat Simple_repeat 4 43 0 1 623 24 0 0 0 chrX 5067407 5067431 -17355396 + AT_rich Low_complexity Low_complexity 1 24 0 1 623 220 234 0 0 chrX 5067496 5067543 -17355284 + A-rich Low_complexity Low_complexity 1 47 0 1 623 195 167 0 0 chrX 5068954 5068996 -17353831 + A-rich Low_complexity Low_complexity 1 42 0 1 623 214 246 16 0 chrX 5069099 5069160 -17353667 + (TTCCG)n Simple_repeat Simple_repeat 4 65 0 1 623 272 27 0 26 chrX 5069194 5069232 -17353595 + (TTCCG)n Simple_repeat Simple_repeat 4 40 0 1 623 210 118 0 0 chrX 5069473 5069507 -17353320 + (CCG)n Simple_repeat Simple_repeat 1 34 0 1 623 273 198 0 0 chrX 5070190 5070271 -17352556 + GA-rich Low_complexity Low_complexity 2 82 0 1 623 204 40 0 0 chrX 5070385 5070410 -17352417 + (CAT)n Simple_repeat Simple_repeat 1 25 0 1 623 296 233 0 28 chrX 5070858 5070964 -17351863 + A-rich Low_complexity Low_complexity 5 107 0 1 623 231 103 0 0 chrX 5071456 5071495 -17351332 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 623 213 224 0 0 chrX 5072394 5072452 -17350375 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 1 623 197 108 27 0 chrX 5072796 5072833 -17349994 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 623 258 116 0 0 chrX 5073191 5073234 -17349593 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 623 339 105 0 0 chrX 5074301 5074358 -17348469 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 623 251 226 10 41 chrX 5076314 5076411 -17346416 + (TTTG)n Simple_repeat Simple_repeat 4 97 0 1 623 25 0 0 0 chrX 5076963 5076988 -17345839 + AT_rich Low_complexity Low_complexity 1 25 0 1 623 186 71 0 0 chrX 5078022 5078050 -17344777 + (CTA)n Simple_repeat Simple_repeat 3 30 0 1 623 306 138 0 0 chrX 5080554 5080612 -17342215 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 623 245 208 0 0 chrX 5081068 5081116 -17341711 + A-rich Low_complexity Low_complexity 1 48 0 1 623 24 0 0 0 chrX 5081925 5081949 -17340878 + AT_rich Low_complexity Low_complexity 1 24 0 1 623 558 114 0 0 chrX 5083783 5083871 -17338956 + (TTCA)n Simple_repeat Simple_repeat 1 88 0 1 623 276 30 0 0 chrX 5084063 5084096 -17338731 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 623 230 212 30 15 chrX 5085540 5085607 -17337220 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 623 195 42 0 0 chrX 5086104 5086128 -17336699 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 623 243 133 0 0 chrX 5086519 5086564 -17336263 + (T)n Simple_repeat Simple_repeat 1 45 0 1 623 250 182 13 25 chrX 5087840 5087919 -17334908 - ROO_I LTR Pao -7519 737 660 1 623 242 169 0 15 chrX 5088083 5088149 -17334678 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 623 470 61 0 15 chrX 5088759 5088826 -17334001 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 623 189 0 0 0 chrX 5089078 5089099 -17333728 + (CTCG)n Simple_repeat Simple_repeat 3 23 0 1 623 218 288 0 0 chrX 5089251 5089317 -17333510 + T-rich Low_complexity Low_complexity 1 66 0 1 623 23 0 0 0 chrX 5089373 5089396 -17333431 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 31 44 0 0 chrX 5089744 5089789 -17333038 + AT_rich Low_complexity Low_complexity 1 45 0 1 623 207 100 0 0 chrX 5091912 5091942 -17330885 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 623 183 42 0 0 chrX 5092355 5092379 -17330448 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 623 182 171 24 0 chrX 5092952 5092993 -17329834 + (CATA)n Simple_repeat Simple_repeat 2 43 0 1 623 202 278 0 0 chrX 5093302 5093374 -17329453 + A-rich Low_complexity Low_complexity 1 72 0 1 623 243 61 0 0 chrX 5095421 5095454 -17327373 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 623 25 31 0 0 chrX 5095519 5095551 -17327276 + AT_rich Low_complexity Low_complexity 1 32 0 1 623 201 39 0 0 chrX 5095821 5095847 -17326980 + (T)n Simple_repeat Simple_repeat 1 26 0 1 623 183 42 0 0 chrX 5095994 5096018 -17326809 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 623 28 29 0 0 chrX 5096739 5096774 -17326053 + AT_rich Low_complexity Low_complexity 1 35 0 1 623 21 36 0 0 chrX 5097181 5097209 -17325618 + AT_rich Low_complexity Low_complexity 1 28 0 1 623 198 0 0 0 chrX 5097310 5097332 -17325495 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 623 180 0 0 0 chrX 5098388 5098408 -17324419 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 623 213 65 0 0 chrX 5100083 5100114 -17322713 + (T)n Simple_repeat Simple_repeat 1 31 0 1 623 230 333 0 13 chrX 5100418 5100497 -17322330 + GA-rich Low_complexity Low_complexity 3 80 0 1 623 330 98 0 0 chrX 5101681 5101732 -17321095 + (GTATG)n Simple_repeat Simple_repeat 4 54 0 1 623 237 33 0 0 chrX 5101795 5101825 -17321002 + (CAGC)n Simple_repeat Simple_repeat 1 30 0 1 623 22 35 0 0 chrX 5103656 5103685 -17319142 + AT_rich Low_complexity Low_complexity 1 29 0 1 623 242 313 0 0 chrX 5104614 5104713 -17318114 + A-rich Low_complexity Low_complexity 1 99 0 1 623 254 274 0 14 chrX 5104921 5104995 -17317832 + C-rich Low_complexity Low_complexity 6 78 0 1 623 207 114 0 0 chrX 5105472 5105507 -17317320 + (T)n Simple_repeat Simple_repeat 1 35 0 1 623 204 170 0 0 chrX 5105851 5105904 -17316923 + A-rich Low_complexity Low_complexity 1 53 0 1 623 21 0 0 0 chrX 5106348 5106369 -17316458 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 401 53 0 18 chrX 5107310 5107367 -17315460 + (CATA)n Simple_repeat Simple_repeat 4 59 0 1 623 189 154 0 0 chrX 5110368 5110407 -17312420 + A-rich Low_complexity Low_complexity 2 40 0 1 623 231 36 0 0 chrX 5110815 5110843 -17311984 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 623 228 200 0 0 chrX 5111019 5111074 -17311753 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 623 237 119 0 0 chrX 5111232 5111274 -17311553 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 624 216 0 0 0 chrX 5112487 5112511 -17310316 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 624 183 100 0 0 chrX 5112855 5112885 -17309942 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 624 213 94 0 0 chrX 5113191 5113223 -17309604 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 624 216 0 0 0 chrX 5113251 5113275 -17309552 + (ATG)n Simple_repeat Simple_repeat 3 26 0 1 624 213 196 0 0 chrX 5114791 5114847 -17307980 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 624 264 100 0 0 chrX 5116314 5116354 -17306473 + (T)n Simple_repeat Simple_repeat 1 40 0 1 624 201 125 0 48 chrX 5117364 5117406 -17305421 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 624 257 51 0 25 chrX 5118090 5118130 -17304697 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 624 216 67 0 0 chrX 5119083 5119113 -17303714 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 624 219 36 0 0 chrX 5119194 5119222 -17303605 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 624 241 289 0 40 chrX 5119378 5119479 -17303348 + (CAG)n Simple_repeat Simple_repeat 3 99 0 1 624 270 269 9 0 chrX 5119629 5119737 -17303090 + ROO_I LTR Pao 652 760 -7496 1 624 21 0 0 0 chrX 5119895 5119916 -17302911 + AT_rich Low_complexity Low_complexity 1 21 0 1 624 36 0 0 0 chrX 5120094 5120130 -17302697 + AT_rich Low_complexity Low_complexity 1 36 0 1 624 22 35 0 0 chrX 5120280 5120309 -17302518 + AT_rich Low_complexity Low_complexity 1 29 0 1 624 28 29 0 0 chrX 5120573 5120608 -17302219 + AT_rich Low_complexity Low_complexity 1 35 0 1 624 215 217 0 0 chrX 5120987 5121033 -17301794 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 624 263 71 24 0 chrX 5121370 5121412 -17301415 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 624 242 116 0 23 chrX 5123879 5123923 -17298904 + (GAAAA)n Simple_repeat Simple_repeat 3 45 0 1 624 207 114 0 0 chrX 5123959 5123994 -17298833 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 624 21 0 0 0 chrX 5124003 5124024 -17298803 + AT_rich Low_complexity Low_complexity 1 21 0 1 624 332 89 0 35 chrX 5124069 5124127 -17298700 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1 624 240 292 11 0 chrX 5124994 5125083 -17297744 + CT-rich Low_complexity Low_complexity 2 91 0 1 624 180 0 0 0 chrX 5125443 5125463 -17297364 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 624 209 237 0 17 chrX 5125526 5125586 -17297241 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 624 222 207 0 0 chrX 5126000 5126058 -17296769 + A-rich Low_complexity Low_complexity 1 58 0 1 624 237 132 0 0 chrX 5126968 5127006 -17295821 + (TTCCG)n Simple_repeat Simple_repeat 4 41 0 1 624 180 0 0 0 chrX 5127084 5127104 -17295723 + (CTA)n Simple_repeat Simple_repeat 2 21 0 1 624 246 62 0 0 chrX 5127321 5127353 -17295474 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 624 202 220 0 48 chrX 5132538 5132600 -17290227 + T-rich Low_complexity Low_complexity 3 61 0 1 624 257 109 0 18 chrX 5132704 5132760 -17290067 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 624 252 122 0 0 chrX 5133123 5133164 -17289663 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 624 274 139 0 44 chrX 5133540 5133630 -17289197 + ROO_I LTR Pao 644 729 -7527 1 624 315 71 0 0 chrX 5133854 5133896 -17288931 + (CAG)n Simple_repeat Simple_repeat 2 43 0 1 624 258 95 0 0 chrX 5134938 5134980 -17287847 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 624 32 26 0 0 chrX 5137662 5137701 -17285126 + AT_rich Low_complexity Low_complexity 1 39 0 1 624 220 222 32 0 chrX 5137716 5137779 -17285048 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 624 263 150 0 16 chrX 5137924 5137985 -17284842 + (CAA)n Simple_repeat Simple_repeat 3 62 0 1 624 234 259 0 0 chrX 5139776 5139830 -17282997 + (TTTCG)n Simple_repeat Simple_repeat 3 56 0 1 624 279 192 13 13 chrX 5145599 5145678 -17277149 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 624 312 27 0 0 chrX 5145934 5145971 -17276856 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 624 417 95 0 0 chrX 5146323 5146386 -17276441 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 624 21 0 0 0 chrX 5146432 5146453 -17276374 + AT_rich Low_complexity Low_complexity 1 21 0 1 624 22 35 0 0 chrX 5147035 5147064 -17275763 + AT_rich Low_complexity Low_complexity 1 29 0 1 624 28 29 0 0 chrX 5147588 5147623 -17275204 + AT_rich Low_complexity Low_complexity 1 35 0 1 624 243 179 0 0 chrX 5147732 5147799 -17275028 + A-rich Low_complexity Low_complexity 1 67 0 1 624 197 167 19 0 chrX 5147927 5147981 -17274846 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 624 369 93 0 0 chrX 5147996 5148050 -17274777 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 624 30 45 0 0 chrX 5148270 5148314 -17274513 + AT_rich Low_complexity Low_complexity 1 44 0 1 624 23 0 0 0 chrX 5148471 5148494 -17274333 + AT_rich Low_complexity Low_complexity 1 23 0 1 624 218 250 16 55 chrX 5148759 5148886 -17273941 + A-rich Low_complexity Low_complexity 2 123 0 1 624 222 37 0 0 chrX 5149396 5149423 -17273404 + (CAG)n Simple_repeat Simple_repeat 2 28 0 1 624 210 91 0 0 chrX 5149588 5149621 -17273206 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1 624 206 182 0 22 chrX 5150361 5150406 -17272421 + (CAT)n Simple_repeat Simple_repeat 3 46 0 1 624 441 55 0 0 chrX 5150579 5150634 -17272193 + DNAREP1_DM LINE Penelope 1 55 -539 1 624 949 42 246 0 chrX 5150636 5150778 -17272049 + DNAREP1_DM LINE Penelope 412 588 -6 1 624 210 207 0 0 chrX 5150945 5151003 -17271824 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 1 624 235 214 0 0 chrX 5151146 5151221 -17271606 + (CCCA)n Simple_repeat Simple_repeat 1 75 0 1 624 294 73 0 0 chrX 5152172 5152213 -17270614 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 624 200 209 0 0 chrX 5153583 5153626 -17269201 + CT-rich Low_complexity Low_complexity 2 44 0 1 624 318 67 0 0 chrX 5153940 5153985 -17268842 + (CATTT)n Simple_repeat Simple_repeat 3 47 0 1 624 249 119 0 0 chrX 5155181 5155223 -17267604 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 624 207 122 73 0 chrX 5155256 5155297 -17267530 + T-rich Low_complexity Low_complexity 2 45 0 1 624 306 0 0 0 chrX 5155814 5155848 -17266979 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 624 249 98 0 0 chrX 5156343 5156384 -17266443 + (T)n Simple_repeat Simple_repeat 1 41 0 1 624 240 111 0 0 chrX 5158452 5158488 -17264339 + (CAA)n Simple_repeat Simple_repeat 2 37 0 1 624 21 36 0 0 chrX 5158786 5158814 -17264013 + AT_rich Low_complexity Low_complexity 1 28 0 1 624 292 286 36 36 chrX 5158858 5159025 -17263802 + XDMR Unknown Unknown 1 167 -194 1 624 280 227 52 0 chrX 5159066 5159163 -17263664 + XDMR_DM Unknown Unknown 236 337 -23 1 624 254 296 102 0 chrX 5159067 5159273 -17263554 - SAR_DM Satellite Satellite -1022 450 224 1 624 23 0 0 0 chrX 5159333 5159356 -17263471 + AT_rich Low_complexity Low_complexity 1 23 0 1 624 291 130 0 0 chrX 5159771 5159825 -17263002 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 624 33 73 0 0 chrX 5159927 5159995 -17262832 + AT_rich Low_complexity Low_complexity 1 68 0 1 624 238 220 0 0 chrX 5160249 5160299 -17262528 + T-rich Low_complexity Low_complexity 5 54 0 1 624 440 202 10 0 chrX 5160548 5160647 -17262180 + ROO_I LTR Pao 641 740 -7516 1 624 285 29 0 0 chrX 5161173 5161207 -17261620 + (CTG)n Simple_repeat Simple_repeat 3 36 0 1 624 21 0 0 0 chrX 5163362 5163383 -17259444 + AT_rich Low_complexity Low_complexity 1 21 0 1 624 228 200 0 0 chrX 5165348 5165418 -17257409 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 624 222 235 0 0 chrX 5165549 5165600 -17257227 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 624 312 120 0 0 chrX 5166251 5166301 -17256526 + (AAATG)n Simple_repeat Simple_repeat 3 52 0 1 624 27 49 0 0 chrX 5166983 5167024 -17255803 + AT_rich Low_complexity Low_complexity 1 41 0 1 624 210 174 0 0 chrX 5168529 5168575 -17254252 + (TTG)n Simple_repeat Simple_repeat 2 47 0 1 624 248 284 0 0 chrX 5168627 5168694 -17254133 + CT-rich Low_complexity Low_complexity 1 67 0 1 624 223 186 23 0 chrX 5169619 5169662 -17253165 + (TATG)n Simple_repeat Simple_repeat 2 45 0 1 624 192 158 0 0 chrX 5172500 5172538 -17250289 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 624 294 29 0 0 chrX 5172762 5172797 -17250030 + (ACTG)n Simple_repeat Simple_repeat 4 38 0 1 624 228 67 0 0 chrX 5173961 5173991 -17248836 + (TATG)n Simple_repeat Simple_repeat 3 32 0 1 624 207 0 0 0 chrX 5175123 5175146 -17247681 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 624 234 0 0 0 chrX 5175998 5176024 -17246803 + (CAT)n Simple_repeat Simple_repeat 2 27 0 1 624 351 127 0 0 chrX 5176973 5177036 -17245791 + (T)n Simple_repeat Simple_repeat 1 63 0 1 624 315 165 11 23 chrX 5178644 5178731 -17244096 + (CA)n Simple_repeat Simple_repeat 1 86 0 1 624 192 250 0 0 chrX 5178996 5179060 -17243767 + GA-rich Low_complexity Low_complexity 88 151 0 1 624 213 39 0 0 chrX 5180803 5180829 -17241998 + (T)n Simple_repeat Simple_repeat 1 26 0 1 624 225 0 0 0 chrX 5181229 5181254 -17241573 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 624 219 191 0 0 chrX 5181690 5181753 -17241074 + A-rich Low_complexity Low_complexity 1 63 0 1 624 25 31 0 0 chrX 5184018 5184050 -17238777 + AT_rich Low_complexity Low_complexity 1 32 0 1 624 408 111 0 0 chrX 5184214 5184277 -17238550 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 624 27 0 0 0 chrX 5185092 5185119 -17237708 + AT_rich Low_complexity Low_complexity 1 27 0 1 624 186 43 0 0 chrX 5185231 5185254 -17237573 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 624 255 320 0 0 chrX 5185395 5185470 -17237357 + (CAGA)n Simple_repeat Simple_repeat 4 78 0 1 624 402 108 0 0 chrX 5185558 5185623 -17237204 + (CAA)n Simple_repeat Simple_repeat 2 66 0 1 624 224 71 48 0 chrX 5185793 5185835 -17236992 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 1 624 240 200 16 32 chrX 5186742 5186804 -17236023 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 1 624 189 0 0 0 chrX 5187026 5187047 -17235780 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 624 210 188 0 20 chrX 5187060 5187109 -17235718 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 624 232 200 0 16 chrX 5187557 5187618 -17235209 + (TTA)n Simple_repeat Simple_repeat 2 61 0 1 624 213 39 0 0 chrX 5188573 5188599 -17234228 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 624 204 240 0 0 chrX 5189238 5189288 -17233539 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 624 201 234 15 30 chrX 5189461 5189527 -17233300 + (CAG)n Simple_repeat Simple_repeat 2 66 0 1 624 24 32 0 0 chrX 5189684 5189715 -17233112 + AT_rich Low_complexity Low_complexity 1 31 0 1 624 23 78 0 0 chrX 5189796 5189847 -17232980 + AT_rich Low_complexity Low_complexity 1 51 0 1 624 321 68 0 0 chrX 5189991 5190035 -17232792 + (TTG)n Simple_repeat Simple_repeat 1 44 0 1 624 300 53 0 0 chrX 5190167 5190205 -17232622 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 624 21 36 0 0 chrX 5190647 5190675 -17232152 + AT_rich Low_complexity Low_complexity 1 28 0 1 624 201 178 0 0 chrX 5190816 5190861 -17231966 + T-rich Low_complexity Low_complexity 1 45 0 1 624 234 82 82 0 chrX 5191130 5191191 -17231636 + T-rich Low_complexity Low_complexity 5 70 0 1 624 276 111 0 0 chrX 5191515 5191560 -17231267 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 624 246 116 0 0 chrX 5191831 5191874 -17230953 + (ATTCG)n Simple_repeat Simple_repeat 4 46 0 1 624 213 39 0 0 chrX 5192385 5192411 -17230416 + (A)n Simple_repeat Simple_repeat 1 26 0 1 624 231 114 0 0 chrX 5193927 5193962 -17228865 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 624 1155 114 0 4 chrX 5194039 5194313 -17228514 + (TAG)n Simple_repeat Simple_repeat 1 272 0 1 624 315 122 0 0 chrX 5194599 5194648 -17228179 + (CATA)n Simple_repeat Simple_repeat 4 52 0 1 624 261 0 0 0 chrX 5194903 5194932 -17227895 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 624 210 139 0 0 chrX 5197663 5197699 -17225128 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 624 261 98 0 0 chrX 5199293 5199334 -17223493 + (A)n Simple_repeat Simple_repeat 1 41 0 1 624 270 0 0 0 chrX 5199616 5199646 -17223181 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 624 189 0 0 0 chrX 5200673 5200694 -17222133 + (CAG)n Simple_repeat Simple_repeat 3 23 0 1 624 189 121 0 0 chrX 5201299 5201332 -17221495 + (A)n Simple_repeat Simple_repeat 1 33 0 1 624 357 43 0 0 chrX 5201747 5201794 -17221033 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 624 180 0 0 0 chrX 5204753 5204773 -17218054 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 624 303 230 0 0 chrX 5205039 5205126 -17217701 + (TA)n Simple_repeat Simple_repeat 2 88 0 1 624 204 216 0 0 chrX 5205783 5205834 -17216993 + A-rich Low_complexity Low_complexity 1 51 0 1 624 207 69 0 0 chrX 5209233 5209262 -17213565 + (A)n Simple_repeat Simple_repeat 1 29 0 1 624 264 30 0 0 chrX 5209508 5209541 -17213286 + (CAT)n Simple_repeat Simple_repeat 2 34 0 1 624 192 77 0 0 chrX 5210091 5210117 -17212710 + (CAAT)n Simple_repeat Simple_repeat 3 28 0 1 624 246 62 0 0 chrX 5211674 5211706 -17211121 + (CGA)n Simple_repeat Simple_repeat 2 33 0 1 624 219 114 0 0 chrX 5212508 5212543 -17210284 + (ATG)n Simple_repeat Simple_repeat 3 37 0 1 624 208 224 0 0 chrX 5212548 5212597 -17210230 + GA-rich Low_complexity Low_complexity 3 51 0 1 624 234 282 0 0 chrX 5213227 5213358 -17209469 + CT-rich Low_complexity Low_complexity 5 135 0 1 624 210 118 0 0 chrX 5214140 5214174 -17208653 + (CTG)n Simple_repeat Simple_repeat 2 35 0 1 624 37 39 0 0 chrX 5216962 5217013 -17205814 + AT_rich Low_complexity Low_complexity 1 51 0 1 624 249 175 65 48 chrX 5217288 5217456 -17205371 + (TATAA)n Simple_repeat Simple_repeat 5 175 0 1 624 31 44 0 0 chrX 5217762 5217807 -17205020 + AT_rich Low_complexity Low_complexity 1 45 0 1 624 24 0 0 0 chrX 5220727 5220751 -17202076 + AT_rich Low_complexity Low_complexity 1 24 0 1 624 24 32 0 0 chrX 5223512 5223543 -17199284 + AT_rich Low_complexity Low_complexity 1 31 0 1 624 339 18 17 52 chrX 5223664 5223722 -17199105 + (TATAA)n Simple_repeat Simple_repeat 2 57 0 1 624 180 0 0 0 chrX 5228027 5228047 -17194780 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 624 213 65 0 0 chrX 5228482 5228513 -17194314 + (A)n Simple_repeat Simple_repeat 1 31 0 1 624 223 140 80 0 chrX 5230181 5230231 -17192596 + T-rich Low_complexity Low_complexity 1 54 0 1 624 223 191 0 0 chrX 5230433 5230475 -17192352 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 624 233 167 19 0 chrX 5231047 5231101 -17191726 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 624 237 268 0 0 chrX 5231403 5231474 -17191353 + (CCCA)n Simple_repeat Simple_repeat 4 74 0 1 624 180 0 0 0 chrX 5232794 5232814 -17190013 + (T)n Simple_repeat Simple_repeat 1 20 0 1 624 10737 4 0 7 chrX 5232814 5233987 -17188840 - LINEJ1_DM LINE Jockey 0 5020 3856 1 624 217 196 0 38 chrX 5234127 5234180 -17188647 + GA-rich Low_complexity Low_complexity 2 52 0 1 624 213 222 0 0 chrX 5234432 5234477 -17188350 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 624 24 67 0 0 chrX 5235213 5235258 -17187569 + AT_rich Low_complexity Low_complexity 1 45 0 1 624 186 143 0 0 chrX 5235352 5235387 -17187440 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 624 204 40 0 0 chrX 5235588 5235613 -17187214 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 624 220 176 19 19 chrX 5235647 5235699 -17187128 + (CAA)n Simple_repeat Simple_repeat 3 54 0 1 624 244 102 41 0 chrX 5235777 5235826 -17187001 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 624 210 162 0 0 chrX 5236035 5236072 -17186755 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 624 216 158 0 0 chrX 5237906 5237944 -17184883 + (CATA)n Simple_repeat Simple_repeat 2 39 0 1 624 323 192 0 13 chrX 5238577 5238656 -17184171 + (TA)n Simple_repeat Simple_repeat 1 78 0 1 624 31 26 0 0 chrX 5238770 5238808 -17184019 + AT_rich Low_complexity Low_complexity 1 38 0 1 624 240 35 0 0 chrX 5239369 5239398 -17183429 + (GGAGA)n Simple_repeat Simple_repeat 1 29 0 1 624 195 42 0 0 chrX 5239876 5239900 -17182927 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 624 294 188 68 19 chrX 5240858 5240961 -17181866 + (TATATG)n Simple_repeat Simple_repeat 6 113 0 1 624 219 167 0 0 chrX 5241191 5241233 -17181594 + (TTCGG)n Simple_repeat Simple_repeat 1 42 0 1 624 189 121 0 0 chrX 5241971 5242004 -17180823 + (T)n Simple_repeat Simple_repeat 1 33 0 1 624 205 195 0 0 chrX 5242097 5242138 -17180689 + T-rich Low_complexity Low_complexity 1 41 0 1 625 186 43 0 0 chrX 5243033 5243056 -17179771 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 625 234 91 0 0 chrX 5243775 5243808 -17179019 + (T)n Simple_repeat Simple_repeat 1 33 0 1 625 546 0 40 0 chrX 5244369 5244443 -17178384 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 625 30 59 0 0 chrX 5244717 5244768 -17178059 + AT_rich Low_complexity Low_complexity 1 51 0 1 625 38 51 0 0 chrX 5245550 5245609 -17177218 + AT_rich Low_complexity Low_complexity 1 59 0 1 625 27 0 0 0 chrX 5245656 5245683 -17177144 + AT_rich Low_complexity Low_complexity 1 27 0 1 625 331 207 0 35 chrX 5246674 5246759 -17176068 + ROO_I LTR Pao 662 743 -7513 1 625 288 158 0 0 chrX 5248120 5248177 -17174650 + (CATA)n Simple_repeat Simple_repeat 4 60 0 1 625 270 0 0 0 chrX 5248588 5248618 -17174209 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 625 189 175 0 0 chrX 5248772 5248812 -17174015 + T-rich Low_complexity Low_complexity 1 40 0 1 625 207 0 0 0 chrX 5248935 5248958 -17173869 + (A)n Simple_repeat Simple_repeat 1 23 0 1 625 209 50 0 91 chrX 5250090 5250134 -17172693 + (A)n Simple_repeat Simple_repeat 1 40 0 1 625 21 0 0 0 chrX 5251029 5251050 -17171777 + GC_rich Low_complexity Low_complexity 1 21 0 1 625 219 159 0 22 chrX 5251539 5251584 -17171243 + (CATCG)n Simple_repeat Simple_repeat 2 45 0 1 625 192 40 0 0 chrX 5254012 5254037 -17168790 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1 625 189 0 0 0 chrX 5254686 5254707 -17168120 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 625 197 83 28 0 chrX 5255065 5255101 -17167726 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 625 22 0 0 0 chrX 5255683 5255705 -17167122 + AT_rich Low_complexity Low_complexity 1 22 0 1 625 207 125 0 0 chrX 5257408 5257448 -17165379 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 625 21 0 0 0 chrX 5257701 5257722 -17165105 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 22 0 0 0 chrX 5257975 5257997 -17164830 + AT_rich Low_complexity Low_complexity 1 22 0 1 625 219 69 0 0 chrX 5258269 5258298 -17164529 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 625 33 73 0 0 chrX 5259329 5259397 -17163430 + AT_rich Low_complexity Low_complexity 1 68 0 1 625 243 218 154 0 chrX 5259485 5259563 -17163264 + BS LINE Jockey 2018 2107 -3019 1 625 234 136 0 0 chrX 5259739 5259783 -17163044 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 625 183 186 0 0 chrX 5261310 5261353 -17161474 + T-rich Low_complexity Low_complexity 1 43 0 1 625 301 290 0 0 chrX 5262031 5262131 -17160696 + A-rich Low_complexity Low_complexity 1 100 0 1 625 184 59 0 56 chrX 5262495 5262531 -17160296 + (TAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 625 396 104 0 0 chrX 5263358 5263425 -17159402 + (CGAAT)n Simple_repeat Simple_repeat 3 69 0 1 625 302 45 23 0 chrX 5264254 5264298 -17158529 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 625 288 91 0 0 chrX 5265421 5265465 -17157362 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 625 222 37 0 0 chrX 5265654 5265681 -17157146 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 625 237 108 0 0 chrX 5266863 5266900 -17155927 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 625 31 0 0 0 chrX 5268715 5268746 -17154081 + AT_rich Low_complexity Low_complexity 1 31 0 1 625 198 71 0 0 chrX 5268958 5268986 -17153841 + (A)n Simple_repeat Simple_repeat 1 28 0 1 625 231 88 0 0 chrX 5269057 5269091 -17153736 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 625 273 163 0 0 chrX 5269316 5269365 -17153462 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 625 204 290 0 0 chrX 5271244 5271306 -17151521 + (AGTTG)n Simple_repeat Simple_repeat 5 66 0 1 625 360 88 0 0 chrX 5272982 5273039 -17149788 + (TTTG)n Simple_repeat Simple_repeat 1 57 0 1 625 316 153 0 23 chrX 5273823 5273910 -17148917 + (TA)n Simple_repeat Simple_repeat 1 85 0 1 625 235 146 18 18 chrX 5274582 5274638 -17148189 + (CAAT)n Simple_repeat Simple_repeat 4 59 0 1 625 213 65 0 0 chrX 5274665 5274696 -17148131 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 625 206 138 42 84 chrX 5274971 5275066 -17147761 + A-rich Low_complexity Low_complexity 5 95 0 1 625 188 86 0 28 chrX 5275108 5275144 -17147683 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 625 458 207 0 6 chrX 5276661 5276826 -17146001 + (CA)n Simple_repeat Simple_repeat 2 165 0 1 625 23 0 0 0 chrX 5276928 5276951 -17145876 + AT_rich Low_complexity Low_complexity 1 23 0 1 625 219 36 0 0 chrX 5277519 5277547 -17145280 + (TAATG)n Simple_repeat Simple_repeat 3 30 0 1 625 259 248 25 42 chrX 5277734 5277852 -17144975 + T-rich Low_complexity Low_complexity 5 120 0 1 625 25 0 0 0 chrX 5279214 5279239 -17143588 + AT_rich Low_complexity Low_complexity 1 25 0 1 625 278 132 19 0 chrX 5279601 5279654 -17143173 + (TTG)n Simple_repeat Simple_repeat 2 55 0 1 625 213 240 0 0 chrX 5279752 5279802 -17143025 + A-rich Low_complexity Low_complexity 1 50 0 1 625 243 103 0 0 chrX 5279816 5279855 -17142972 + (TTC)n Simple_repeat Simple_repeat 2 40 0 1 625 180 179 0 0 chrX 5280361 5280400 -17142427 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 625 257 135 0 19 chrX 5281225 5281278 -17141549 + GA-rich Low_complexity Low_complexity 3 54 0 1 625 203 125 0 40 chrX 5281437 5281487 -17141340 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 1 625 29 19 0 55 chrX 5281623 5281678 -17141149 + AT_rich Low_complexity Low_complexity 1 52 0 1 625 24 0 0 0 chrX 5281887 5281911 -17140916 + AT_rich Low_complexity Low_complexity 1 24 0 1 625 212 87 0 61 chrX 5282432 5282481 -17140346 + (A)n Simple_repeat Simple_repeat 1 46 0 1 625 196 148 16 16 chrX 5282686 5282748 -17140079 + (CAA)n Simple_repeat Simple_repeat 2 63 0 1 625 230 56 0 27 chrX 5282921 5282958 -17139869 + (CAGAA)n Simple_repeat Simple_repeat 5 40 0 1 625 201 132 0 0 chrX 5283022 5283060 -17139767 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 625 3368 5 7 7 chrX 5283849 5284263 -17138564 - DM297_LTR LTR Gypsy 0 414 1 1 625 11694 6 0 0 chrX 5284263 5285686 -17137141 - DM297_I LTR Gypsy 0 6167 4745 1 625 6597 6 0 1 chrX 5285683 5286482 -17136345 - DM297_I LTR Gypsy -5369 798 1 1 625 3368 5 7 7 chrX 5286482 5286896 -17135931 - DM297_LTR LTR Gypsy 0 414 1 1 625 186 103 0 0 chrX 5286930 5286959 -17135868 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 625 22 35 0 0 chrX 5287512 5287541 -17135286 + AT_rich Low_complexity Low_complexity 1 29 0 1 625 189 94 0 0 chrX 5287713 5287745 -17135082 + (T)n Simple_repeat Simple_repeat 1 32 0 1 625 207 125 0 0 chrX 5288287 5288327 -17134500 + (A)n Simple_repeat Simple_repeat 1 40 0 1 625 243 161 0 0 chrX 5288952 5289008 -17133819 + A-rich Low_complexity Low_complexity 1 56 0 1 625 198 167 0 0 chrX 5289411 5289447 -17133380 + A-rich Low_complexity Low_complexity 1 36 0 1 625 30 0 0 0 chrX 5289660 5289690 -17133137 + AT_rich Low_complexity Low_complexity 1 30 0 1 625 32 26 0 0 chrX 5289968 5290007 -17132820 + AT_rich Low_complexity Low_complexity 1 39 0 1 625 309 68 0 0 chrX 5290658 5290702 -17132125 + (CCAA)n Simple_repeat Simple_repeat 1 44 0 1 625 227 276 0 22 chrX 5291138 5291227 -17131600 + A-rich Low_complexity Low_complexity 3 89 0 1 625 27 0 0 0 chrX 5291946 5291973 -17130854 + AT_rich Low_complexity Low_complexity 1 27 0 1 625 296 137 27 0 chrX 5292823 5292896 -17129931 + (TCTCTG)n Simple_repeat Simple_repeat 4 78 0 1 625 280 250 0 14 chrX 5294298 5294367 -17128460 + (TAG)n Simple_repeat Simple_repeat 3 70 0 1 625 206 62 0 30 chrX 5295462 5295495 -17127332 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 625 209 33 0 32 chrX 5295910 5295941 -17126886 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 625 267 93 0 0 chrX 5296618 5296661 -17126166 + (CAGAA)n Simple_repeat Simple_repeat 5 47 0 1 625 387 105 0 0 chrX 5296870 5296927 -17125900 + (CGAAT)n Simple_repeat Simple_repeat 2 58 0 1 625 192 40 0 0 chrX 5297168 5297193 -17125634 + (A)n Simple_repeat Simple_repeat 1 25 0 1 625 225 127 58 87 chrX 5297677 5297746 -17125081 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 1 625 230 111 0 53 chrX 5297786 5297843 -17124984 + A-rich Low_complexity Low_complexity 1 54 0 1 625 250 170 8 74 chrX 5298107 5298228 -17124599 + (CTAAA)n Simple_repeat Simple_repeat 3 115 0 1 625 220 273 13 0 chrX 5298480 5298557 -17124270 + A-rich Low_complexity Low_complexity 2 79 0 1 625 376 67 33 0 chrX 5298758 5298818 -17124009 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 625 21 36 0 0 chrX 5299039 5299067 -17123760 + AT_rich Low_complexity Low_complexity 1 28 0 1 625 24 0 0 0 chrX 5299271 5299295 -17123532 + AT_rich Low_complexity Low_complexity 1 24 0 1 625 24 0 0 0 chrX 5299343 5299367 -17123460 + AT_rich Low_complexity Low_complexity 1 24 0 1 625 25 65 0 0 chrX 5302608 5302654 -17120173 + AT_rich Low_complexity Low_complexity 1 46 0 1 625 183 139 0 0 chrX 5303635 5303671 -17119156 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 625 312 161 0 0 chrX 5303897 5303959 -17118868 + (TATAG)n Simple_repeat Simple_repeat 1 62 0 1 625 29 28 0 0 chrX 5304662 5304698 -17118129 + AT_rich Low_complexity Low_complexity 1 36 0 1 625 270 56 0 0 chrX 5307076 5307112 -17115715 + (TAA)n Simple_repeat Simple_repeat 1 36 0 1 625 215 175 24 59 chrX 5307834 5307919 -17114908 + T-rich Low_complexity Low_complexity 4 85 0 1 625 263 104 21 0 chrX 5308611 5308659 -17114168 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 625 209 276 0 0 chrX 5311926 5311984 -17110843 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 625 312 91 0 0 chrX 5313143 5313187 -17109640 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 1 625 214 175 0 0 chrX 5314132 5314172 -17108655 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 625 21 0 0 0 chrX 5315286 5315307 -17107520 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 25 0 0 0 chrX 5315424 5315449 -17107378 + AT_rich Low_complexity Low_complexity 1 25 0 1 625 26 0 0 0 chrX 5319013 5319039 -17103788 + AT_rich Low_complexity Low_complexity 1 26 0 1 625 186 156 0 0 chrX 5320201 5320246 -17102581 + (CAG)n Simple_repeat Simple_repeat 2 46 0 1 625 29 0 0 0 chrX 5320546 5320575 -17102252 + AT_rich Low_complexity Low_complexity 1 29 0 1 625 22 0 0 0 chrX 5321016 5321038 -17101789 + AT_rich Low_complexity Low_complexity 1 22 0 1 625 21 57 0 0 chrX 5322025 5322060 -17100767 + AT_rich Low_complexity Low_complexity 1 35 0 1 625 21 0 0 0 chrX 5322312 5322333 -17100494 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 23 54 0 0 chrX 5323332 5323369 -17099458 + AT_rich Low_complexity Low_complexity 1 37 0 1 625 35 24 0 0 chrX 5323451 5323493 -17099334 + AT_rich Low_complexity Low_complexity 1 42 0 1 625 29 70 0 0 chrX 5323547 5323604 -17099223 + AT_rich Low_complexity Low_complexity 1 57 0 1 625 204 97 0 0 chrX 5324035 5324066 -17098761 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 1 625 22 35 0 0 chrX 5324223 5324252 -17098575 + AT_rich Low_complexity Low_complexity 1 29 0 1 625 212 250 0 0 chrX 5324982 5325042 -17097785 + GA-rich Low_complexity Low_complexity 2 61 0 1 625 229 271 0 0 chrX 5325764 5325823 -17097004 + GA-rich Low_complexity Low_complexity 1 59 0 1 625 27 81 0 0 chrX 5326483 5326545 -17096282 + AT_rich Low_complexity Low_complexity 1 62 0 1 625 28 0 0 0 chrX 5328451 5328479 -17094348 + AT_rich Low_complexity Low_complexity 1 28 0 1 625 219 69 0 0 chrX 5328526 5328555 -17094272 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 625 209 250 0 0 chrX 5328973 5329021 -17093806 + (GCTG)n Simple_repeat Simple_repeat 1 48 0 1 625 23 0 0 0 chrX 5330562 5330585 -17092242 + AT_rich Low_complexity Low_complexity 1 23 0 1 625 276 77 0 0 chrX 5330808 5330847 -17091980 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 625 220 338 0 0 chrX 5331029 5331103 -17091724 + G-rich Low_complexity Low_complexity 3 76 0 1 625 38 22 0 0 chrX 5331244 5331289 -17091538 + AT_rich Low_complexity Low_complexity 1 45 0 1 625 194 116 0 23 chrX 5331873 5331917 -17090910 + (CGAAT)n Simple_repeat Simple_repeat 5 47 0 1 625 21 0 0 0 chrX 5332526 5332547 -17090280 + AT_rich Low_complexity Low_complexity 1 21 0 1 625 181 57 0 54 chrX 5334420 5334457 -17088370 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 1 625 214 191 0 0 chrX 5334537 5334579 -17088248 + T-rich Low_complexity Low_complexity 1 42 0 1 625 303 28 0 0 chrX 5336078 5336114 -17086713 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 625 29 0 0 0 chrX 5336778 5336807 -17086020 + AT_rich Low_complexity Low_complexity 1 29 0 1 625 182 62 31 0 chrX 5336920 5336952 -17085875 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 625 189 175 0 0 chrX 5337054 5337094 -17085733 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 625 267 31 0 0 chrX 5337590 5337622 -17085205 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 625 217 254 0 0 chrX 5340382 5340437 -17082390 + A-rich Low_complexity Low_complexity 1 55 0 1 625 213 108 0 0 chrX 5341032 5341069 -17081758 + (T)n Simple_repeat Simple_repeat 1 37 0 1 625 213 39 0 0 chrX 5341552 5341578 -17081249 + (A)n Simple_repeat Simple_repeat 1 26 0 1 625 324 133 0 0 chrX 5343751 5343811 -17079016 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 625 225 0 0 0 chrX 5345848 5345873 -17076954 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 625 189 0 0 0 chrX 5348392 5348413 -17074414 + (A)n Simple_repeat Simple_repeat 1 21 0 1 625 204 111 0 0 chrX 5350949 5350985 -17071842 + (T)n Simple_repeat Simple_repeat 1 36 0 1 625 237 65 0 0 chrX 5351758 5351789 -17071038 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1 625 198 118 0 0 chrX 5352726 5352760 -17070067 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 625 227 133 22 0 chrX 5353198 5353243 -17069584 + T-rich Low_complexity Low_complexity 1 46 0 1 625 198 0 0 0 chrX 5353320 5353342 -17069485 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 625 1542 203 11 13 chrX 5354337 5354712 -17068115 - SAR_DM Satellite Satellite -501 971 598 1 625 264 232 0 0 chrX 5354665 5354721 -17068106 + ARS406_DM Unknown Unknown 1 56 -297 1 625 204 40 0 0 chrX 5356091 5356116 -17066711 + (A)n Simple_repeat Simple_repeat 1 25 0 1 625 270 132 0 0 chrX 5356440 5356493 -17066334 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 625 198 0 0 0 chrX 5359280 5359302 -17063525 + (A)n Simple_repeat Simple_repeat 1 22 0 1 625 231 189 0 0 chrX 5359420 5359473 -17063354 + (CATA)n Simple_repeat Simple_repeat 4 56 0 1 625 405 0 0 0 chrX 5360574 5360619 -17062208 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 625 216 0 0 0 chrX 5360853 5360877 -17061950 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 625 213 108 0 0 chrX 5362975 5363012 -17059815 + (TTGG)n Simple_repeat Simple_repeat 2 38 0 1 625 27 0 0 0 chrX 5365298 5365325 -17057502 + AT_rich Low_complexity Low_complexity 1 27 0 1 625 207 114 0 0 chrX 5367130 5367165 -17055662 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 625 183 42 0 0 chrX 5367195 5367219 -17055608 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 625 189 74 0 0 chrX 5368794 5368821 -17054006 + (A)n Simple_repeat Simple_repeat 1 27 0 1 625 198 208 0 0 chrX 5369659 5369707 -17053120 + GA-rich Low_complexity Low_complexity 2 49 0 1 625 23 33 0 0 chrX 5371212 5371242 -17051585 + AT_rich Low_complexity Low_complexity 1 30 0 1 626 34360 1 1 0 chrX 5375146 5379033 -17043794 + I_DM LINE I 1582 5470 -761 1 626 204 188 123 12 chrX 5379614 5379695 -17043132 + (TTCA)n Simple_repeat Simple_repeat 2 91 0 1 626 228 67 0 0 chrX 5380675 5380705 -17042122 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 626 21 0 0 0 chrX 5381366 5381387 -17041440 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 408 40 0 0 chrX 5381573 5381623 -17041204 + (ACTG)n Simple_repeat Simple_repeat 4 53 0 1 626 252 86 0 0 chrX 5382355 5382390 -17040437 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 626 379 269 48 30 chrX 5384091 5384256 -17038571 - XDMR Unknown Unknown -193 168 1 1 626 3543 213 35 40 chrX 5384150 5385502 -17037325 + SAR_DM Satellite Satellite 1 1345 -211 1 626 216 67 0 0 chrX 5386346 5386376 -17036451 + (CCA)n Simple_repeat Simple_repeat 1 30 0 1 626 21 0 0 0 chrX 5387581 5387602 -17035225 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 222 37 0 0 chrX 5392328 5392355 -17030472 + (A)n Simple_repeat Simple_repeat 1 27 0 1 626 201 39 0 0 chrX 5392833 5392859 -17029968 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 626 2468 213 23 38 chrX 5396665 5397406 -17025421 + SAR_DM Satellite Satellite 191 920 -552 1 626 208 200 16 16 chrX 5400267 5400328 -17022499 + A-rich Low_complexity Low_complexity 5 65 0 1 626 22 0 0 0 chrX 5402527 5402549 -17020278 + AT_rich Low_complexity Low_complexity 1 22 0 1 626 210 118 0 0 chrX 5402878 5402912 -17019915 + (CAT)n Simple_repeat Simple_repeat 1 34 0 1 626 258 32 0 0 chrX 5403309 5403340 -17019487 + (CGAAT)n Simple_repeat Simple_repeat 2 32 0 1 626 22 35 0 0 chrX 5404106 5404135 -17018692 + AT_rich Low_complexity Low_complexity 1 29 0 1 626 285 128 0 0 chrX 5405375 5405422 -17017405 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 626 23 0 0 0 chrX 5406071 5406094 -17016733 + AT_rich Low_complexity Low_complexity 1 23 0 1 626 221 204 20 0 chrX 5406946 5406995 -17015832 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 626 216 0 0 0 chrX 5407122 5407146 -17015681 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 626 195 139 0 0 chrX 5409792 5409828 -17012999 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 626 339 145 0 0 chrX 5411153 5411222 -17011605 + (TC)n Simple_repeat Simple_repeat 1 69 0 1 626 290 276 0 0 chrX 5412231 5412318 -17010509 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 626 3972 204 33 36 chrX 5415220 5418074 -17004753 - SAR_DM Satellite Satellite -203 2843 1 1 626 15288 5 3 42 chrX 5418928 5420968 -17001859 + DM412 LTR Gypsy 1 1793 -5104 1 626 12524 3 1 1 chrX 5420944 5422734 -17000093 + DM412 LTR Gypsy 5482 6897 0 1 626 41 21 0 0 chrX 5422787 5422835 -16999992 + AT_rich Low_complexity Low_complexity 1 48 0 1 626 317 103 0 33 chrX 5423604 5423664 -16999163 + (CTG)n Simple_repeat Simple_repeat 3 60 0 1 626 252 130 0 0 chrX 5423808 5423854 -16998973 + (CTG)n Simple_repeat Simple_repeat 3 48 0 1 626 21 0 0 0 chrX 5425121 5425142 -16997685 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 253 304 11 0 chrX 5427629 5427721 -16995106 + (CA)n Simple_repeat Simple_repeat 1 93 0 1 626 222 128 0 0 chrX 5427769 5427808 -16995019 + (CAG)n Simple_repeat Simple_repeat 3 41 0 1 626 320 182 57 0 chrX 5431741 5431829 -16990998 - ROO_I LTR Pao -7506 750 658 1 626 215 175 0 17 chrX 5433749 5433807 -16989020 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 626 192 77 0 0 chrX 5435434 5435460 -16987367 + (ATGGTG)n Simple_repeat Simple_repeat 1 26 0 1 626 23 0 0 0 chrX 5436189 5436212 -16986615 + AT_rich Low_complexity Low_complexity 1 23 0 1 626 243 220 0 0 chrX 5437718 5437809 -16985018 + (CA)n Simple_repeat Simple_repeat 1 91 0 1 626 219 88 0 0 chrX 5438129 5438163 -16984664 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 626 282 95 0 0 chrX 5438226 5438268 -16984559 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 626 243 103 0 0 chrX 5438681 5438720 -16984107 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 626 233 57 0 28 chrX 5439269 5439305 -16983522 + (CATA)n Simple_repeat Simple_repeat 4 38 0 1 626 21 0 0 0 chrX 5441160 5441181 -16981646 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 213 132 0 0 chrX 5442530 5442568 -16980259 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 626 213 154 0 25 chrX 5443491 5443531 -16979296 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 626 201 284 30 0 chrX 5443587 5443654 -16979173 + (CGG)n Simple_repeat Simple_repeat 3 71 0 1 626 238 254 0 0 chrX 5443708 5443771 -16979056 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 626 246 105 0 0 chrX 5444004 5444042 -16978785 + (CAT)n Simple_repeat Simple_repeat 2 39 0 1 626 267 103 0 0 chrX 5444447 5444486 -16978341 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1 626 183 80 0 0 chrX 5444520 5444545 -16978282 + (GGTTG)n Simple_repeat Simple_repeat 5 29 0 1 626 337 143 0 75 chrX 5446217 5446323 -16976504 + ROO_I LTR Pao 641 738 -7518 1 626 219 69 0 0 chrX 5446823 5446852 -16975975 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 626 360 119 0 0 chrX 5447019 5447078 -16975749 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 626 323 296 10 30 chrX 5448260 5448361 -16974466 + (TTGGGG)n Simple_repeat Simple_repeat 2 100 0 1 626 201 255 0 0 chrX 5448464 5448511 -16974316 + (ATG)n Simple_repeat Simple_repeat 2 48 0 1 626 23 0 0 0 chrX 5448621 5448644 -16974183 + AT_rich Low_complexity Low_complexity 1 23 0 1 626 211 169 33 33 chrX 5450542 5450603 -16972224 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 1 626 26 0 0 0 chrX 5452008 5452034 -16970793 + AT_rich Low_complexity Low_complexity 1 26 0 1 626 231 103 0 0 chrX 5452851 5452890 -16969937 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 626 242 320 0 10 chrX 5453103 5453204 -16969623 + (TG)n Simple_repeat Simple_repeat 1 100 0 1 626 300 264 0 47 chrX 5453460 5453587 -16969240 + (TGG)n Simple_repeat Simple_repeat 2 122 0 1 626 243 140 0 0 chrX 5453708 5453758 -16969069 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 626 232 312 0 0 chrX 5453796 5453876 -16968951 + (TTG)n Simple_repeat Simple_repeat 2 81 0 1 626 263 253 26 13 chrX 5454270 5454346 -16968481 + (CTG)n Simple_repeat Simple_repeat 1 77 0 1 626 242 151 11 95 chrX 5454469 5454564 -16968263 + ROO_I LTR Pao 651 737 -7519 1 626 23 0 0 0 chrX 5455517 5455540 -16967287 + AT_rich Low_complexity Low_complexity 1 23 0 1 626 198 191 0 0 chrX 5455786 5455828 -16966999 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 626 195 100 0 0 chrX 5455888 5455918 -16966909 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 626 198 0 0 0 chrX 5456433 5456455 -16966372 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 626 315 0 0 0 chrX 5456783 5456818 -16966009 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 626 21 0 0 0 chrX 5456844 5456865 -16965962 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 207 174 21 21 chrX 5457390 5457437 -16965390 + (TTA)n Simple_repeat Simple_repeat 3 49 0 1 626 192 135 0 0 chrX 5459538 5459575 -16963252 + (T)n Simple_repeat Simple_repeat 1 37 0 1 626 186 43 0 0 chrX 5460781 5460804 -16962023 + (TCC)n Simple_repeat Simple_repeat 3 25 0 1 626 363 23 0 0 chrX 5460841 5460885 -16961942 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 626 231 88 0 0 chrX 5461928 5461962 -16960865 + (CAT)n Simple_repeat Simple_repeat 1 34 0 1 626 243 61 0 0 chrX 5462043 5462076 -16960751 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 626 207 69 0 0 chrX 5462338 5462367 -16960460 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 626 22 0 0 0 chrX 5462692 5462714 -16960113 + AT_rich Low_complexity Low_complexity 1 22 0 1 626 24 67 0 0 chrX 5465770 5465815 -16957012 + AT_rich Low_complexity Low_complexity 1 45 0 1 626 217 155 0 33 chrX 5466381 5466441 -16956386 + T-rich Low_complexity Low_complexity 4 61 0 1 626 29 0 0 0 chrX 5467152 5467181 -16955646 + AT_rich Low_complexity Low_complexity 1 29 0 1 626 33 25 0 0 chrX 5467272 5467312 -16955515 + AT_rich Low_complexity Low_complexity 1 40 0 1 626 264 122 0 0 chrX 5467752 5467793 -16955034 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 626 21 0 0 0 chrX 5468951 5468972 -16953855 + AT_rich Low_complexity Low_complexity 1 21 0 1 626 198 0 0 0 chrX 5470550 5470572 -16952255 + (TAA)n Simple_repeat Simple_repeat 3 24 0 1 626 273 128 0 0 chrX 5470692 5470739 -16952088 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 1 626 22 56 0 0 chrX 5471312 5471348 -16951479 + AT_rich Low_complexity Low_complexity 1 36 0 1 626 708 231 8 30 chrX 5474255 5474491 -16948336 + XDMR_DM Unknown Unknown 130 360 0 1 626 3794 211 16 26 chrX 5474295 5475348 -16947479 - SAR_DM Satellite Satellite -239 1233 191 1 626 203 103 0 25 chrX 5476176 5476216 -16946611 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 626 180 0 0 0 chrX 5480019 5480039 -16942788 + (T)n Simple_repeat Simple_repeat 1 20 0 1 626 221 167 19 0 chrX 5481003 5481057 -16941770 + (TTA)n Simple_repeat Simple_repeat 3 57 0 1 626 218 217 0 0 chrX 5484602 5484648 -16938179 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 626 288 130 0 0 chrX 5485410 5485456 -16937371 + (CAATC)n Simple_repeat Simple_repeat 4 49 0 1 626 252 59 0 0 chrX 5485921 5485955 -16936872 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 626 25 31 0 0 chrX 5486429 5486461 -16936366 + AT_rich Low_complexity Low_complexity 1 32 0 1 626 28 61 0 0 chrX 5487406 5487455 -16935372 + AT_rich Low_complexity Low_complexity 1 49 0 1 626 233 228 0 0 chrX 5487817 5487874 -16934953 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 626 441 116 0 0 chrX 5488750 5488819 -16934008 + (CAG)n Simple_repeat Simple_repeat 1 69 0 1 626 282 73 0 0 chrX 5490163 5490204 -16932623 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 626 201 196 0 0 chrX 5491468 5491514 -16931313 + T-rich Low_complexity Low_complexity 5 50 0 1 626 21 36 0 0 chrX 5492606 5492634 -16930193 + AT_rich Low_complexity Low_complexity 1 28 0 1 626 204 122 0 0 chrX 5493095 5493136 -16929691 + (CAGAGA)n Simple_repeat Simple_repeat 6 46 0 1 626 273 57 0 0 chrX 5494218 5494253 -16928574 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 626 222 128 0 0 chrX 5494386 5494425 -16928402 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 626 30 0 0 0 chrX 5495388 5495418 -16927409 + AT_rich Low_complexity Low_complexity 1 30 0 1 626 22 0 0 0 chrX 5495639 5495661 -16927166 + AT_rich Low_complexity Low_complexity 1 22 0 1 626 405 0 0 0 chrX 5496065 5496110 -16926717 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 626 224 220 0 0 chrX 5496437 5496514 -16926313 + (CCCA)n Simple_repeat Simple_repeat 1 77 0 1 626 236 254 14 27 chrX 5496743 5496816 -16926011 + A-rich Low_complexity Low_complexity 4 75 0 1 626 258 164 0 0 chrX 5498524 5498579 -16924248 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 626 234 261 0 30 chrX 5498659 5498726 -16924101 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 626 264 100 0 0 chrX 5498846 5498886 -16923941 + (CATA)n Simple_repeat Simple_repeat 1 40 0 1 626 348 148 0 0 chrX 5499194 5499255 -16923572 + (CAT)n Simple_repeat Simple_repeat 3 63 0 1 626 257 228 0 0 chrX 5502307 5502364 -16920463 + CT-rich Low_complexity Low_complexity 2 58 0 1 626 206 182 0 22 chrX 5503869 5503914 -16918913 + T-rich Low_complexity Low_complexity 5 48 0 1 626 208 188 21 0 chrX 5504305 5504353 -16918474 + A-rich Low_complexity Low_complexity 3 51 0 1 627 209 184 0 0 chrX 5505249 5505287 -16917540 + (CCA)n Simple_repeat Simple_repeat 1 38 0 1 627 300 53 0 0 chrX 5505339 5505377 -16917450 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 627 243 180 0 0 chrX 5505433 5505483 -16917344 + (TTCGGG)n Simple_repeat Simple_repeat 3 52 0 1 627 310 223 0 0 chrX 5505511 5505614 -16917213 + ROO_I LTR Pao 639 741 -7515 1 627 251 364 0 0 chrX 5505665 5505808 -16917019 + (CGG)n Simple_repeat Simple_repeat 2 144 0 1 627 292 255 11 11 chrX 5505666 5505761 -16917066 + (CAG)n Simple_repeat Simple_repeat 3 97 0 1 627 180 158 0 0 chrX 5506241 5506279 -16916548 + A-rich Low_complexity Low_complexity 1 38 0 1 627 22 56 0 0 chrX 5506996 5507032 -16915795 + AT_rich Low_complexity Low_complexity 1 36 0 1 627 188 122 0 24 chrX 5508557 5508599 -16914228 + (TAAAAA)n Simple_repeat Simple_repeat 4 44 0 1 627 346 322 0 0 chrX 5509070 5509250 -16913577 + (CAG)n Simple_repeat Simple_repeat 1 180 0 1 627 345 315 0 0 chrX 5509445 5509623 -16913204 + (CAG)n Simple_repeat Simple_repeat 1 178 0 1 627 198 136 0 0 chrX 5510113 5510157 -16912670 + (TTC)n Simple_repeat Simple_repeat 2 45 0 1 627 205 195 0 0 chrX 5510519 5510560 -16912267 + A-rich Low_complexity Low_complexity 1 41 0 1 627 38 22 0 0 chrX 5513243 5513288 -16909539 + AT_rich Low_complexity Low_complexity 1 45 0 1 627 219 114 0 0 chrX 5516184 5516219 -16906608 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 627 21 57 0 0 chrX 5519528 5519563 -16903264 + AT_rich Low_complexity Low_complexity 1 35 0 1 627 22 35 0 0 chrX 5519893 5519922 -16902905 + AT_rich Low_complexity Low_complexity 1 29 0 1 627 252 77 0 0 chrX 5520074 5520113 -16902714 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 627 288 164 0 0 chrX 5520521 5520588 -16902239 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 627 31 58 0 0 chrX 5521649 5521701 -16901126 + AT_rich Low_complexity Low_complexity 1 52 0 1 627 218 98 0 47 chrX 5521999 5522042 -16900785 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 627 201 73 23 68 chrX 5522654 5522698 -16900129 + (TTTCG)n Simple_repeat Simple_repeat 2 43 0 1 627 234 0 0 0 chrX 5524865 5524891 -16897936 + (TGG)n Simple_repeat Simple_repeat 2 27 0 1 627 303 300 0 21 chrX 5524911 5525054 -16897773 + (TGG)n Simple_repeat Simple_repeat 3 142 0 1 627 189 0 0 0 chrX 5525573 5525594 -16897233 + (GA)n Simple_repeat Simple_repeat 2 22 0 1 627 291 93 0 0 chrX 5525994 5526037 -16896790 + (CATAT)n Simple_repeat Simple_repeat 3 45 0 1 627 210 37 0 0 chrX 5526175 5526202 -16896625 + (AGTAG)n Simple_repeat Simple_repeat 5 31 0 1 627 404 51 0 17 chrX 5526998 5527058 -16895769 + (TAG)n Simple_repeat Simple_repeat 3 61 0 1 627 206 80 59 20 chrX 5528548 5528599 -16894228 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 627 204 40 0 0 chrX 5529747 5529772 -16893055 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 627 381 167 0 0 chrX 5530711 5530789 -16892038 + CT-rich Low_complexity Low_complexity 2 79 0 1 627 216 185 0 0 chrX 5531765 5531819 -16891008 + CT-rich Low_complexity Low_complexity 2 55 0 1 627 195 152 0 0 chrX 5532638 5532684 -16890143 + (CCCA)n Simple_repeat Simple_repeat 3 48 0 1 627 29 0 0 0 chrX 5535014 5535043 -16887784 + AT_rich Low_complexity Low_complexity 1 29 0 1 627 21 82 0 0 chrX 5536335 5536384 -16886443 + AT_rich Low_complexity Low_complexity 1 49 0 1 627 204 167 24 0 chrX 5537166 5537208 -16885619 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 627 1146 254 72 55 chrX 5538314 5538911 -16883916 - SAR_DM Satellite Satellite -637 835 229 1 627 218 208 57 0 chrX 5540807 5540860 -16881967 + (CACCAT)n Simple_repeat Simple_repeat 1 56 0 1 627 207 176 0 0 chrX 5541945 5541979 -16880848 + (TTTCG)n Simple_repeat Simple_repeat 1 34 0 1 627 200 180 40 0 chrX 5542080 5542130 -16880697 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 627 189 154 0 0 chrX 5543395 5543434 -16879393 + (CATA)n Simple_repeat Simple_repeat 3 41 0 1 627 186 43 0 0 chrX 5543799 5543822 -16879005 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 627 240 170 38 0 chrX 5544358 5544411 -16878416 + (TCTCTG)n Simple_repeat Simple_repeat 2 56 0 1 627 213 39 0 0 chrX 5545672 5545698 -16877129 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 627 249 57 0 0 chrX 5545698 5545733 -16877094 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 627 180 0 0 0 chrX 5549820 5549840 -16872987 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 627 282 95 0 0 chrX 5554831 5554873 -16867954 + (TCC)n Simple_repeat Simple_repeat 2 43 0 1 627 354 45 0 0 chrX 5555055 5555099 -16867728 + (TTCGGG)n Simple_repeat Simple_repeat 3 46 0 1 627 213 65 0 0 chrX 5555487 5555518 -16867309 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 627 586 246 21 83 chrX 5557550 5557922 -16864905 + XDMR_DM Unknown Unknown 1 349 -11 1 627 689 242 34 19 chrX 5557736 5558035 -16864792 - SAR_DM Satellite Satellite -587 885 614 1 627 428 292 13 0 chrX 5557903 5558057 -16864770 + XDMR Unknown Unknown 1 156 -205 1 627 205 86 29 0 chrX 5558134 5558169 -16864658 + (TTA)n Simple_repeat Simple_repeat 1 36 0 1 627 182 91 0 29 chrX 5558283 5558317 -16864510 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 627 254 242 0 15 chrX 5560294 5560361 -16862466 + (CGTG)n Simple_repeat Simple_repeat 1 66 0 1 627 204 40 0 0 chrX 5561662 5561687 -16861140 + (GGAGAA)n Simple_repeat Simple_repeat 1 25 0 1 627 211 175 17 17 chrX 5563380 5563438 -16859389 + (CAG)n Simple_repeat Simple_repeat 1 58 0 1 627 189 171 0 0 chrX 5563584 5563619 -16859208 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 627 180 0 0 0 chrX 5563993 5564013 -16858814 + (CGATA)n Simple_repeat Simple_repeat 1 20 0 1 627 301 215 9 45 chrX 5566042 5566154 -16856673 + LINEJ1_DM LINE Jockey 4913 5020 0 1 627 31 26 0 0 chrX 5566154 5566192 -16856635 + AT_rich Low_complexity Low_complexity 1 38 0 1 627 26 64 0 0 chrX 5566222 5566269 -16856558 + AT_rich Low_complexity Low_complexity 1 47 0 1 627 208 310 35 0 chrX 5572716 5572803 -16850024 + (CATA)n Simple_repeat Simple_repeat 3 92 0 1 627 189 0 0 0 chrX 5573474 5573495 -16849332 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 627 183 80 0 0 chrX 5573630 5573655 -16849172 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 627 200 296 24 12 chrX 5577886 5577968 -16844859 + (CGG)n Simple_repeat Simple_repeat 1 83 0 1 627 202 337 0 0 chrX 5580446 5580547 -16842280 + CT-rich Low_complexity Low_complexity 1 101 0 1 627 215 306 12 12 chrX 5584235 5584321 -16838506 + (CGTG)n Simple_repeat Simple_repeat 2 87 0 1 627 264 30 0 0 chrX 5584566 5584599 -16838228 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 627 189 107 0 0 chrX 5584625 5584653 -16838174 + (CAAGT)n Simple_repeat Simple_repeat 1 28 0 1 627 180 111 0 0 chrX 5584761 5584788 -16838039 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 627 207 167 0 0 chrX 5585162 5585204 -16837623 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 627 205 177 16 31 chrX 5586697 5586761 -16836066 + (TTA)n Simple_repeat Simple_repeat 2 64 0 1 627 185 0 40 0 chrX 5586812 5586837 -16835990 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 627 27 0 0 0 chrX 5592916 5592943 -16829884 + AT_rich Low_complexity Low_complexity 1 27 0 1 627 21 0 0 0 chrX 5593065 5593086 -16829741 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 23 33 0 0 chrX 5593308 5593338 -16829489 + AT_rich Low_complexity Low_complexity 1 30 0 1 627 240 143 0 0 chrX 5594099 5594141 -16828686 + (CCAA)n Simple_repeat Simple_repeat 4 45 0 1 627 198 136 0 0 chrX 5594835 5594879 -16827948 + (T)n Simple_repeat Simple_repeat 1 44 0 1 627 183 80 0 0 chrX 5595756 5595781 -16827046 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 1 627 21 0 0 0 chrX 5596194 5596215 -16826612 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 210 204 18 18 chrX 5596432 5596487 -16826340 + (TTG)n Simple_repeat Simple_repeat 1 55 0 1 627 195 129 0 0 chrX 5598026 5598057 -16824770 + (CCA)n Simple_repeat Simple_repeat 3 33 0 1 627 267 79 0 0 chrX 5599582 5599620 -16823207 + (TCC)n Simple_repeat Simple_repeat 3 40 0 1 627 198 176 0 0 chrX 5599827 5599878 -16822949 + (GATTG)n Simple_repeat Simple_repeat 3 53 0 1 627 279 114 0 0 chrX 5605447 5605491 -16817336 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 1 627 287 79 0 0 chrX 5606038 5606076 -16816751 + DNAREP1_DM LINE Penelope 26 63 -531 1 627 577 276 17 13 chrX 5606075 5606306 -16816521 - XDMR Unknown Unknown -129 232 1 1 627 2740 200 10 13 chrX 5606119 5606833 -16815994 + SAR_DM Satellite Satellite 170 881 -591 1 627 859 222 12 16 chrX 5606637 5606884 -16815943 - XDMR_DM Unknown Unknown 0 360 115 1 627 264 30 0 0 chrX 5607477 5607510 -16815317 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 627 28 86 0 0 chrX 5612790 5612860 -16809967 + AT_rich Low_complexity Low_complexity 1 70 0 1 627 212 184 0 0 chrX 5613842 5613880 -16808947 + A-rich Low_complexity Low_complexity 1 38 0 1 627 34 24 0 0 chrX 5614019 5614060 -16808767 + AT_rich Low_complexity Low_complexity 1 41 0 1 627 228 200 0 20 chrX 5614704 5614755 -16808072 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 627 183 42 0 0 chrX 5614935 5614959 -16807868 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1 627 240 59 0 0 chrX 5614990 5615024 -16807803 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 627 206 62 0 30 chrX 5615165 5615198 -16807629 + (CATCC)n Simple_repeat Simple_repeat 5 36 0 1 627 189 74 0 0 chrX 5615252 5615279 -16807548 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 627 205 294 10 10 chrX 5615543 5615646 -16807181 + (CTG)n Simple_repeat Simple_repeat 3 105 0 1 627 243 88 0 0 chrX 5618153 5618187 -16804640 + (TAAAG)n Simple_repeat Simple_repeat 5 38 0 1 627 25 0 0 0 chrX 5618687 5618712 -16804115 + AT_rich Low_complexity Low_complexity 1 25 0 1 627 294 194 0 0 chrX 5619840 5619912 -16802915 + (CAGC)n Simple_repeat Simple_repeat 3 74 0 1 627 43626 0 0 0 chrX 5621470 5626191 -16796636 + DOC LINE Jockey 5 4725 0 1 627 216 200 50 0 chrX 5628968 5629028 -16793799 + T-rich Low_complexity Low_complexity 5 67 0 1 627 22 35 0 0 chrX 5632367 5632396 -16790431 + AT_rich Low_complexity Low_complexity 1 29 0 1 627 21 0 0 0 chrX 5633079 5633100 -16789727 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 195 162 0 0 chrX 5633202 5633239 -16789588 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 628 247 271 0 0 chrX 5639930 5639989 -16782838 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 628 208 135 0 0 chrX 5640759 5640796 -16782031 + (CAAAAA)n Simple_repeat Simple_repeat 1 37 0 1 628 212 184 0 20 chrX 5641010 5641060 -16781767 + (ACCG)n Simple_repeat Simple_repeat 1 49 0 1 628 180 0 0 0 chrX 5645332 5645352 -16777475 + (CTA)n Simple_repeat Simple_repeat 1 20 0 1 628 30 59 0 0 chrX 5646133 5646184 -16776643 + AT_rich Low_complexity Low_complexity 1 51 0 1 628 912 136 0 0 chrX 5647009 5647185 -16775642 + (CAG)n Simple_repeat Simple_repeat 1 176 0 1 628 189 74 0 0 chrX 5650534 5650561 -16772266 + (A)n Simple_repeat Simple_repeat 1 27 0 1 628 203 118 0 56 chrX 5652714 5652731 -16770096 + (CACCAT)n Simple_repeat Simple_repeat 2 17 0 1 628 195 69 0 0 chrX 5652731 5652760 -16770067 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 628 203 118 0 56 chrX 5652760 5652778 -16770049 + (CACCAT)n Simple_repeat Simple_repeat 6 23 0 1 628 189 0 0 0 chrX 5653221 5653242 -16769585 + (CAAAG)n Simple_repeat Simple_repeat 3 23 0 1 628 234 211 19 0 chrX 5654134 5654186 -16768641 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 1 628 23 0 0 0 chrX 5654246 5654269 -16768558 + AT_rich Low_complexity Low_complexity 1 23 0 1 628 189 74 0 0 chrX 5654679 5654706 -16768121 + (CATCT)n Simple_repeat Simple_repeat 1 27 0 1 628 23 0 0 0 chrX 5656995 5657018 -16765809 + AT_rich Low_complexity Low_complexity 1 23 0 1 628 198 71 0 0 chrX 5662711 5662739 -16760088 + (CGAT)n Simple_repeat Simple_repeat 3 30 0 1 628 229 256 11 32 chrX 5663024 5663117 -16759710 + T-rich Low_complexity Low_complexity 5 95 0 1 628 211 211 19 0 chrX 5664516 5664568 -16758259 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 628 255 185 11 69 chrX 5664658 5664745 -16758082 + A-rich Low_complexity Low_complexity 1 82 0 1 628 249 33 0 0 chrX 5664900 5664930 -16757897 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 1 628 228 236 25 124 chrX 5666226 5666347 -16756480 + MAX_I LTR Pao 54 162 -7752 1 628 33 0 0 0 chrX 5666516 5666549 -16756278 + AT_rich Low_complexity Low_complexity 1 33 0 1 628 21 0 0 0 chrX 5668540 5668561 -16754266 + AT_rich Low_complexity Low_complexity 1 21 0 1 628 835 204 0 53 chrX 5669236 5669464 -16753363 + XDMR_DM Unknown Unknown 145 360 0 1 628 2980 190 23 16 chrX 5669267 5669969 -16752858 - SAR_DM Satellite Satellite -591 881 175 1 628 252 270 25 63 chrX 5669829 5669987 -16752840 + XDMR_DM Unknown Unknown 6 157 -203 1 628 27 0 0 0 chrX 5671149 5671176 -16751651 + AT_rich Low_complexity Low_complexity 1 27 0 1 628 180 0 0 0 chrX 5671273 5671293 -16751534 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 1 628 25 0 0 0 chrX 5672917 5672942 -16749885 + AT_rich Low_complexity Low_complexity 1 25 0 1 628 220 208 38 0 chrX 5675726 5675779 -16747048 + (CCG)n Simple_repeat Simple_repeat 2 56 0 1 628 219 36 0 0 chrX 5676553 5676581 -16746246 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 628 255 31 0 0 chrX 5677538 5677570 -16745257 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 628 207 188 0 0 chrX 5677676 5677724 -16745103 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 628 201 39 0 0 chrX 5680158 5680184 -16742643 + (CATCG)n Simple_repeat Simple_repeat 5 30 0 1 628 21 0 0 0 chrX 5685876 5685897 -16736930 + AT_rich Low_complexity Low_complexity 1 21 0 1 628 216 154 0 0 chrX 5688883 5688935 -16733892 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 628 267 31 0 0 chrX 5690127 5690159 -16732668 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 628 261 98 0 0 chrX 5690602 5690643 -16732184 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 628 21 36 0 0 chrX 5691668 5691696 -16731131 + AT_rich Low_complexity Low_complexity 1 28 0 1 628 213 94 0 0 chrX 5692017 5692049 -16730778 + (CATCT)n Simple_repeat Simple_repeat 5 36 0 1 628 33 0 0 0 chrX 5694091 5694124 -16728703 + AT_rich Low_complexity Low_complexity 1 33 0 1 628 195 42 0 0 chrX 5698254 5698278 -16724549 + (ATG)n Simple_repeat Simple_repeat 2 25 0 1 628 264 59 0 0 chrX 5698458 5698492 -16724335 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1 628 26 64 0 0 chrX 5699318 5699365 -16723462 + AT_rich Low_complexity Low_complexity 1 47 0 1 628 201 162 0 0 chrX 5699544 5699581 -16723246 + T-rich Low_complexity Low_complexity 1 37 0 1 628 234 91 0 0 chrX 5700338 5700371 -16722456 + (CTG)n Simple_repeat Simple_repeat 3 35 0 1 628 219 69 0 0 chrX 5701531 5701560 -16721267 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1 628 204 149 0 0 chrX 5702389 5702436 -16720391 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 1 628 231 125 0 0 chrX 5702454 5702494 -16720333 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 628 183 129 0 0 chrX 5702535 5702566 -16720261 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 628 24 53 0 0 chrX 5705249 5705287 -16717540 + AT_rich Low_complexity Low_complexity 1 38 0 1 628 200 243 43 0 chrX 5705343 5705413 -16717414 + (TCCA)n Simple_repeat Simple_repeat 4 76 0 1 628 248 109 0 21 chrX 5707152 5707199 -16715628 + SAR_DM Satellite Satellite 566 611 -861 1 628 22 0 0 0 chrX 5711211 5711233 -16711594 + AT_rich Low_complexity Low_complexity 1 22 0 1 628 2957 181 14 16 chrX 5711505 5712174 -16710653 + SAR_DM Satellite Satellite 191 857 -615 1 628 263 146 18 0 chrX 5712674 5712729 -16710098 + CT-rich Low_complexity Low_complexity 1 56 0 1 628 306 148 0 0 chrX 5714435 5714489 -16708338 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 1 628 293 243 0 39 chrX 5716834 5716911 -16705916 + (CAGA)n Simple_repeat Simple_repeat 4 77 0 1 628 22 0 0 0 chrX 5717726 5717748 -16705079 + AT_rich Low_complexity Low_complexity 1 22 0 1 628 242 194 15 0 chrX 5719816 5719883 -16702944 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 628 21 36 0 0 chrX 5720805 5720833 -16701994 + AT_rich Low_complexity Low_complexity 1 28 0 1 628 204 97 0 0 chrX 5722140 5722171 -16700656 + (T)n Simple_repeat Simple_repeat 1 31 0 1 628 222 91 0 0 chrX 5722224 5722257 -16700570 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 628 267 253 13 0 chrX 5722850 5722929 -16699898 + (ACTG)n Simple_repeat Simple_repeat 2 81 0 1 628 201 74 0 0 chrX 5724249 5724276 -16698551 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 628 320 153 0 56 chrX 5725206 5725296 -16697531 + ROO_I LTR Pao 642 726 -7530 1 628 24 32 0 0 chrX 5726400 5726431 -16696396 + AT_rich Low_complexity Low_complexity 1 31 0 1 628 219 36 0 0 chrX 5729577 5729605 -16693222 + (T)n Simple_repeat Simple_repeat 1 28 0 1 628 209 273 0 13 chrX 5729803 5729881 -16692946 + A-rich Low_complexity Low_complexity 4 80 0 1 628 195 42 0 0 chrX 5730031 5730055 -16692772 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 628 208 245 0 0 chrX 5730194 5730243 -16692584 + (CAA)n Simple_repeat Simple_repeat 3 51 0 1 628 22 0 0 0 chrX 5730550 5730572 -16692255 + AT_rich Low_complexity Low_complexity 1 22 0 1 628 237 119 0 0 chrX 5731616 5731658 -16691169 + (CAG)n Simple_repeat Simple_repeat 1 42 0 1 628 180 231 0 0 chrX 5731947 5731999 -16690828 + (CAA)n Simple_repeat Simple_repeat 1 52 0 1 628 373 321 0 0 chrX 5732052 5732214 -16690613 + (CAA)n Simple_repeat Simple_repeat 1 162 0 1 628 276 183 0 126 chrX 5732218 5732337 -16690490 + ROO_I LTR Pao 642 745 -7511 1 628 288 111 0 0 chrX 5732604 5732649 -16690178 + (CAG)n Simple_repeat Simple_repeat 1 45 0 1 628 255 280 10 10 chrX 5732693 5732794 -16690033 + ROO_I LTR Pao 625 725 -7531 1 628 230 202 0 103 chrX 5732873 5732989 -16689838 + ROO_I LTR Pao 637 740 -7516 1 628 192 40 0 0 chrX 5733074 5733099 -16689728 + (GGA)n Simple_repeat Simple_repeat 2 26 0 1 628 206 236 27 14 chrX 5734747 5734820 -16688007 + A-rich Low_complexity Low_complexity 1 74 0 1 628 28 48 0 0 chrX 5736033 5736075 -16686752 + AT_rich Low_complexity Low_complexity 1 42 0 1 628 276 111 0 0 chrX 5736295 5736340 -16686487 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 628 243 103 0 0 chrX 5738733 5738772 -16684055 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 628 1080 160 7 4 chrX 5740286 5740514 -16682313 - SAR_DM Satellite Satellite -722 750 567 1 628 198 0 0 0 chrX 5741068 5741090 -16681737 + (GCTG)n Simple_repeat Simple_repeat 1 22 0 1 628 252 0 0 0 chrX 5742048 5742076 -16680751 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 628 24 32 0 0 chrX 5742357 5742388 -16680439 + AT_rich Low_complexity Low_complexity 1 31 0 1 628 200 194 0 0 chrX 5743262 5743298 -16679529 + G-rich Low_complexity Low_complexity 2 37 0 1 628 23 0 0 0 chrX 5746965 5746988 -16675839 + AT_rich Low_complexity Low_complexity 1 23 0 1 628 242 77 0 93 chrX 5747659 5747702 -16675125 - DNAREP1_DM LINE Penelope 0 594 556 1 628 23 33 0 0 chrX 5747829 5747859 -16674968 + AT_rich Low_complexity Low_complexity 1 30 0 1 628 226 159 48 0 chrX 5750286 5750349 -16672478 + (CACCAT)n Simple_repeat Simple_repeat 3 68 0 1 628 198 0 0 0 chrX 5754751 5754773 -16668054 + (TCTCG)n Simple_repeat Simple_repeat 3 24 0 1 628 205 98 49 0 chrX 5755454 5755495 -16667332 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 1 628 220 143 0 75 chrX 5756031 5756084 -16666743 + (CTCA)n Simple_repeat Simple_repeat 2 50 0 1 628 212 235 0 0 chrX 5756855 5756906 -16665921 + (CAG)n Simple_repeat Simple_repeat 2 52 0 1 628 219 114 0 0 chrX 5757037 5757072 -16665755 + (CAA)n Simple_repeat Simple_repeat 1 35 0 1 628 198 0 0 0 chrX 5757136 5757158 -16665669 + (TC)n Simple_repeat Simple_repeat 1 22 0 1 628 201 147 0 0 chrX 5759350 5759384 -16663443 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 628 238 178 0 0 chrX 5759499 5759544 -16663283 + T-rich Low_complexity Low_complexity 3 47 0 1 628 207 0 0 0 chrX 5760135 5760158 -16662669 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 628 2726 209 19 19 chrX 5761082 5761773 -16661054 + SAR_DM Satellite Satellite 191 881 -591 1 628 873 206 14 9 chrX 5761607 5761823 -16661004 - XDMR Unknown Unknown 0 361 145 1 628 23 33 0 0 chrX 5763165 5763195 -16659632 + AT_rich Low_complexity Low_complexity 1 30 0 1 629 24 53 0 0 chrX 5767483 5767521 -16655306 + AT_rich Low_complexity Low_complexity 1 38 0 1 629 1266 68 294 35 chrX 5767677 5767899 -16654928 - G5A_DM LINE Jockey -3 2838 2583 1 629 25 0 0 0 chrX 5768209 5768234 -16654593 + AT_rich Low_complexity Low_complexity 1 25 0 1 629 22 0 0 0 chrX 5770977 5770999 -16651828 + AT_rich Low_complexity Low_complexity 1 22 0 1 629 1720 0 0 0 chrX 5777895 5778081 -16644746 + POGON1 DNA Pogo 1 186 0 1 629 1720 0 0 0 chrX 5778247 5778433 -16644394 + POGON1 DNA Pogo 1 186 0 1 629 236 245 0 0 chrX 5779879 5779932 -16642895 + GA-rich Low_complexity Low_complexity 2 54 0 1 629 207 0 0 0 chrX 5781075 5781098 -16641729 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 629 22 0 0 0 chrX 5782657 5782679 -16640148 + AT_rich Low_complexity Low_complexity 1 22 0 1 629 297 51 0 0 chrX 5784938 5784977 -16637850 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 629 23 0 0 0 chrX 5786519 5786542 -16636285 + AT_rich Low_complexity Low_complexity 1 23 0 1 629 216 0 0 0 chrX 5789944 5789968 -16632859 + (TATG)n Simple_repeat Simple_repeat 1 24 0 1 629 28 29 0 0 chrX 5790569 5790604 -16632223 + AT_rich Low_complexity Low_complexity 1 35 0 1 629 206 246 0 32 chrX 5793349 5793412 -16629415 + (CGGGG)n Simple_repeat Simple_repeat 4 64 0 1 629 34 0 0 0 chrX 5795002 5795036 -16627791 + AT_rich Low_complexity Low_complexity 1 34 0 1 629 21 0 0 0 chrX 5798098 5798119 -16624708 + AT_rich Low_complexity Low_complexity 1 21 0 1 629 238 161 36 0 chrX 5798237 5798293 -16624534 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 629 203 192 37 49 chrX 5798500 5798582 -16624245 + CT-rich Low_complexity Low_complexity 2 82 0 1 629 27 29 0 0 chrX 5799272 5799306 -16623521 + AT_rich Low_complexity Low_complexity 1 34 0 1 629 191 88 29 0 chrX 5799541 5799575 -16623252 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 629 226 119 16 48 chrX 5803197 5803259 -16619568 + (CAG)n Simple_repeat Simple_repeat 3 62 0 1 629 561 115 0 0 chrX 5803316 5803403 -16619424 + (CAG)n Simple_repeat Simple_repeat 3 89 0 1 629 201 74 0 0 chrX 5804966 5804993 -16617834 + (CAGT)n Simple_repeat Simple_repeat 2 28 0 1 629 219 36 0 0 chrX 5805167 5805195 -16617632 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 629 180 0 0 0 chrX 5806433 5806453 -16616374 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 629 24 53 0 0 chrX 5808821 5808859 -16613968 + AT_rich Low_complexity Low_complexity 1 38 0 1 629 195 100 0 0 chrX 5812833 5812863 -16609964 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 629 236 255 0 0 chrX 5813282 5813333 -16609494 + (CATA)n Simple_repeat Simple_repeat 2 52 0 1 629 21 0 0 0 chrX 5814167 5814188 -16608639 + AT_rich Low_complexity Low_complexity 1 21 0 1 629 22 35 0 0 chrX 5814711 5814740 -16608087 + AT_rich Low_complexity Low_complexity 1 29 0 1 629 214 186 0 0 chrX 5814795 5814838 -16607989 + T-rich Low_complexity Low_complexity 1 43 0 1 629 214 147 0 0 chrX 5816721 5816755 -16606072 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 629 230 262 0 0 chrX 5816968 5817029 -16605798 + T-rich Low_complexity Low_complexity 1 61 0 1 629 348 147 0 0 chrX 5818215 5818290 -16604537 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 1 629 207 208 0 20 chrX 5818807 5818856 -16603971 + T-rich Low_complexity Low_complexity 3 50 0 1 629 258 229 72 0 chrX 5818884 5818967 -16603860 + ROO_I LTR Pao 632 720 -7536 1 629 215 150 0 16 chrX 5819042 5819103 -16603724 + (CATCC)n Simple_repeat Simple_repeat 1 60 0 1 629 24 0 0 0 chrX 5820548 5820572 -16602255 + AT_rich Low_complexity Low_complexity 1 24 0 1 629 220 189 0 0 chrX 5820634 5820671 -16602156 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1 629 2468 0 0 0 chrX 5821181 5821457 -16601370 - Copia_LTR LTR Copia 0 276 1 1 629 42042 1 0 0 chrX 5821457 5826052 -16596775 - Copia_I LTR Copia 0 4593 1 1 629 2468 0 0 0 chrX 5826052 5826328 -16596499 - Copia_LTR LTR Copia 0 276 1 1 629 202 265 29 0 chrX 5826344 5826412 -16596415 + T-rich Low_complexity Low_complexity 3 72 0 1 629 27 0 0 0 chrX 5827430 5827457 -16595370 + AT_rich Low_complexity Low_complexity 1 27 0 1 629 24 0 0 0 chrX 5827562 5827586 -16595241 + AT_rich Low_complexity Low_complexity 1 24 0 1 629 261 57 0 0 chrX 5827608 5827643 -16595184 + (A)n Simple_repeat Simple_repeat 1 35 0 1 629 228 182 0 0 chrX 5827899 5827943 -16594884 + (TATG)n Simple_repeat Simple_repeat 1 44 0 1 629 234 105 0 0 chrX 5829519 5829557 -16593270 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 629 201 139 0 0 chrX 5829784 5829827 -16593000 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 629 37 23 0 0 chrX 5830018 5830062 -16592765 + AT_rich Low_complexity Low_complexity 1 44 0 1 629 26 30 0 0 chrX 5830114 5830147 -16592680 + AT_rich Low_complexity Low_complexity 1 33 0 1 629 263 93 23 0 chrX 5831478 5831521 -16591306 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 629 216 261 0 0 chrX 5831921 5831990 -16590837 + T-rich Low_complexity Low_complexity 1 69 0 1 629 22 56 0 0 chrX 5832361 5832397 -16590430 + AT_rich Low_complexity Low_complexity 1 36 0 1 629 216 260 13 13 chrX 5833797 5833875 -16588952 + (CAG)n Simple_repeat Simple_repeat 2 79 0 1 629 213 260 0 0 chrX 5834372 5834422 -16588405 + (CCG)n Simple_repeat Simple_repeat 3 52 0 1 629 217 206 0 60 chrX 5834774 5834841 -16587986 + T-rich Low_complexity Low_complexity 3 65 0 1 629 27 29 0 0 chrX 5835648 5835682 -16587145 + AT_rich Low_complexity Low_complexity 1 34 0 1 629 24 0 0 0 chrX 5836209 5836233 -16586594 + AT_rich Low_complexity Low_complexity 1 24 0 1 629 200 125 0 24 chrX 5836446 5836487 -16586340 + (TATAA)n Simple_repeat Simple_repeat 2 41 0 1 629 246 32 0 0 chrX 5838480 5838511 -16584316 + (T)n Simple_repeat Simple_repeat 1 31 0 1 629 26 0 0 0 chrX 5839290 5839316 -16583511 + AT_rich Low_complexity Low_complexity 1 26 0 1 629 34 24 0 0 chrX 5839515 5839556 -16583271 + AT_rich Low_complexity Low_complexity 1 41 0 1 629 189 0 0 0 chrX 5841508 5841529 -16581298 + (T)n Simple_repeat Simple_repeat 1 21 0 1 629 241 167 30 15 chrX 5846120 5846187 -16576640 + (TAAA)n Simple_repeat Simple_repeat 1 68 0 1 629 22 56 0 0 chrX 5846199 5846235 -16576592 + AT_rich Low_complexity Low_complexity 1 36 0 1 629 449 314 0 0 chrX 5847826 5847963 -16574864 + (TGG)n Simple_repeat Simple_repeat 1 137 0 1 629 22 35 0 0 chrX 5848213 5848242 -16574585 + AT_rich Low_complexity Low_complexity 1 29 0 1 629 284 111 19 0 chrX 5849416 5849470 -16573357 + (ATTCG)n Simple_repeat Simple_repeat 1 55 0 1 629 254 102 61 0 chrX 5850950 5850999 -16571828 + (GATTG)n Simple_repeat Simple_repeat 3 54 0 1 629 215 231 0 0 chrX 5858896 5858935 -16563892 + (TATG)n Simple_repeat Simple_repeat 4 42 0 1 629 34 72 0 0 chrX 5860041 5860110 -16562717 + AT_rich Low_complexity Low_complexity 1 69 0 1 629 21 0 0 0 chrX 5860471 5860492 -16562335 + AT_rich Low_complexity Low_complexity 1 21 0 1 629 23 0 0 0 chrX 5862950 5862973 -16559854 + AT_rich Low_complexity Low_complexity 1 23 0 1 629 184 154 0 37 chrX 5864922 5864976 -16557851 + (GAATG)n Simple_repeat Simple_repeat 5 56 0 1 629 213 94 0 0 chrX 5865509 5865541 -16557286 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 629 243 88 0 0 chrX 5868420 5868454 -16554373 + (T)n Simple_repeat Simple_repeat 1 34 0 1 629 237 270 0 0 chrX 5869320 5869383 -16553444 + (CAGT)n Simple_repeat Simple_repeat 3 65 0 1 629 273 57 0 0 chrX 5870677 5870712 -16552115 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 629 240 269 0 0 chrX 5871835 5871913 -16550914 + T-rich Low_complexity Low_complexity 1 78 0 1 629 1007 274 74 69 chrX 5873405 5874557 -16548270 + SAR_DM Satellite Satellite 1 1157 -352 1 629 455 223 51 83 chrX 5874351 5874605 -16548222 - XDMR_DM Unknown Unknown -11 349 104 1 629 222 218 0 0 chrX 5875551 5875606 -16547221 + T-rich Low_complexity Low_complexity 1 55 0 1 629 22 0 0 0 chrX 5876392 5876414 -16546413 + AT_rich Low_complexity Low_complexity 1 22 0 1 629 23 68 0 0 chrX 5879733 5879777 -16543050 + AT_rich Low_complexity Low_complexity 1 44 0 1 629 31 44 0 0 chrX 5880887 5880932 -16541895 + AT_rich Low_complexity Low_complexity 1 45 0 1 629 218 246 7 84 chrX 5886145 5886300 -16536527 + (TTAA)n Simple_repeat Simple_repeat 1 143 0 1 629 30 59 0 0 chrX 5886551 5886602 -16536225 + AT_rich Low_complexity Low_complexity 1 51 0 1 629 264 247 14 0 chrX 5887102 5887175 -16535652 + T-rich Low_complexity Low_complexity 1 74 0 1 629 431 259 14 51 chrX 5887283 5887499 -16535328 + XDMR_DM Unknown Unknown 142 349 -11 1 629 717 281 57 69 chrX 5887364 5887957 -16534870 - SAR_DM Satellite Satellite -642 830 245 1 629 21 36 0 0 chrX 5888822 5888850 -16533977 + AT_rich Low_complexity Low_complexity 1 28 0 1 629 207 139 0 0 chrX 5891027 5891063 -16531764 + (A)n Simple_repeat Simple_repeat 1 36 0 1 629 300 91 0 0 chrX 5892054 5892098 -16530729 + (CGAGT)n Simple_repeat Simple_repeat 5 48 0 1 629 228 185 0 0 chrX 5892141 5892195 -16530632 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 629 24 32 0 0 chrX 5893582 5893613 -16529214 + AT_rich Low_complexity Low_complexity 1 31 0 1 629 219 114 0 0 chrX 5896761 5896796 -16526031 + (TTCGG)n Simple_repeat Simple_repeat 3 37 0 1 629 188 154 0 19 chrX 5896940 5896993 -16525834 + (CATCC)n Simple_repeat Simple_repeat 3 54 0 1 629 22 0 0 0 chrX 5898008 5898030 -16524797 + AT_rich Low_complexity Low_complexity 1 22 0 1 630 23 0 0 0 chrX 5901602 5901625 -16521202 + AT_rich Low_complexity Low_complexity 1 23 0 1 630 268 232 12 24 chrX 5904501 5904585 -16518242 + T-rich Low_complexity Low_complexity 2 84 0 1 630 180 0 0 0 chrX 5904984 5905004 -16517823 + (A)n Simple_repeat Simple_repeat 1 20 0 1 630 230 243 0 14 chrX 5907344 5907415 -16515412 + CT-rich Low_complexity Low_complexity 2 71 0 1 630 22 35 0 0 chrX 5908263 5908292 -16514535 + AT_rich Low_complexity Low_complexity 1 29 0 1 630 186 255 0 0 chrX 5911106 5911157 -16511670 + (TATATG)n Simple_repeat Simple_repeat 1 51 0 1 630 944 309 56 53 chrX 5917376 5918402 -16504425 + SAR_DM Satellite Satellite 1 1029 -352 1 630 200 217 0 0 chrX 5918616 5918662 -16504165 + T-rich Low_complexity Low_complexity 1 46 0 1 630 198 71 0 0 chrX 5919198 5919226 -16503601 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 630 243 61 0 0 chrX 5921712 5921745 -16501082 + (T)n Simple_repeat Simple_repeat 1 33 0 1 630 216 158 0 0 chrX 5922435 5922473 -16500354 + (GGATG)n Simple_repeat Simple_repeat 2 39 0 1 630 23 0 0 0 chrX 5925052 5925075 -16497752 + AT_rich Low_complexity Low_complexity 1 23 0 1 630 216 67 0 0 chrX 5925719 5925749 -16497078 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 1 630 198 227 0 0 chrX 5928817 5928892 -16493935 + GA-rich Low_complexity Low_complexity 2 76 0 1 630 25 31 0 0 chrX 5931152 5931184 -16491643 + AT_rich Low_complexity Low_complexity 1 32 0 1 630 23 33 0 0 chrX 5933533 5933563 -16489264 + AT_rich Low_complexity Low_complexity 1 30 0 1 630 205 250 0 0 chrX 5934882 5934930 -16487897 + GA-rich Low_complexity Low_complexity 1 48 0 1 630 300 102 0 0 chrX 5943423 5943472 -16479355 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 630 220 229 12 12 chrX 5946534 5946618 -16476209 + (CAT)n Simple_repeat Simple_repeat 1 84 0 1 630 25 0 0 0 chrX 5948278 5948303 -16474524 + AT_rich Low_complexity Low_complexity 1 25 0 1 630 286 211 0 0 chrX 5948678 5948749 -16474078 + ROO_I LTR Pao 664 734 -7522 1 630 273 29 0 0 chrX 5949820 5949854 -16472973 + (CTG)n Simple_repeat Simple_repeat 2 35 0 1 630 221 246 0 30 chrX 5951344 5951411 -16471416 + T-rich Low_complexity Low_complexity 2 66 0 1 630 204 67 0 0 chrX 5953093 5953123 -16469704 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 1 630 23 33 0 0 chrX 5955605 5955635 -16467192 + AT_rich Low_complexity Low_complexity 1 30 0 1 630 222 62 0 0 chrX 5955748 5955780 -16467047 + (CAG)n Simple_repeat Simple_repeat 3 34 0 1 630 236 310 0 0 chrX 5957422 5957493 -16465334 + (CAA)n Simple_repeat Simple_repeat 2 72 0 1 630 22 0 0 0 chrX 5959728 5959750 -16463077 + AT_rich Low_complexity Low_complexity 1 22 0 1 630 266 248 61 48 chrX 5960507 5960672 -16462155 + SAR_DM Satellite Satellite 1090 1256 -216 1 630 34 0 0 0 chrX 5961754 5961788 -16461039 + AT_rich Low_complexity Low_complexity 1 34 0 1 630 22 35 0 0 chrX 5963182 5963211 -16459616 + AT_rich Low_complexity Low_complexity 1 29 0 1 630 247 85 21 21 chrX 5963327 5963375 -16459452 + (TTCTC)n Simple_repeat Simple_repeat 1 48 0 1 630 29 0 0 0 chrX 5963450 5963479 -16459348 + AT_rich Low_complexity Low_complexity 1 29 0 1 630 21 0 0 0 chrX 5969074 5969095 -16453732 + AT_rich Low_complexity Low_complexity 1 21 0 1 630 22 56 0 0 chrX 5971099 5971135 -16451692 + AT_rich Low_complexity Low_complexity 1 36 0 1 630 32 67 0 0 chrX 5974183 5974243 -16448584 + AT_rich Low_complexity Low_complexity 1 60 0 1 630 203 288 0 0 chrX 5974534 5974593 -16448234 + (GCTG)n Simple_repeat Simple_repeat 4 62 0 1 630 223 274 0 0 chrX 5975446 5975519 -16447308 + (CCG)n Simple_repeat Simple_repeat 3 75 0 1 630 225 262 26 46 chrX 5988106 5988258 -16434569 + A-rich Low_complexity Low_complexity 4 152 0 1 630 240 163 0 0 chrX 5988835 5988878 -16433949 + (CAGAT)n Simple_repeat Simple_repeat 4 46 0 1 630 220 189 0 36 chrX 5989595 5989650 -16433177 + (CAA)n Simple_repeat Simple_repeat 3 55 0 1 630 231 36 0 0 chrX 5990396 5990424 -16432403 + (CAG)n Simple_repeat Simple_repeat 3 30 0 1 630 189 0 0 0 chrX 5991520 5991541 -16431286 + (TCCG)n Simple_repeat Simple_repeat 3 23 0 1 630 195 139 0 0 chrX 5992500 5992536 -16430291 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1 630 209 314 0 0 chrX 5994318 5994404 -16428423 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 1 630 22 0 0 0 chrX 5997651 5997673 -16425154 + AT_rich Low_complexity Low_complexity 1 22 0 1 630 318 67 0 0 chrX 5999085 5999130 -16423697 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 630 26 0 0 0 chrX 5999620 5999646 -16423181 + AT_rich Low_complexity Low_complexity 1 26 0 1 630 181 67 20 82 chrX 6000159 6000208 -16422619 + T-rich Low_complexity Low_complexity 1 46 0 1 630 202 302 0 0 chrX 6001594 6001657 -16421170 + G-rich Low_complexity Low_complexity 6 68 0 1 630 198 103 0 0 chrX 6001776 6001805 -16421022 + (CCA)n Simple_repeat Simple_repeat 2 30 0 1 630 21 0 0 0 chrX 6004464 6004485 -16418342 + AT_rich Low_complexity Low_complexity 1 21 0 1 630 217 180 40 0 chrX 6005081 6005131 -16417696 + (CATATA)n Simple_repeat Simple_repeat 1 52 0 1 630 239 273 0 0 chrX 6005230 6005296 -16417531 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 630 195 130 0 53 chrX 6005873 6005930 -16416897 + (TATG)n Simple_repeat Simple_repeat 2 55 0 1 630 228 35 0 0 chrX 6006621 6006650 -16416177 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 630 235 214 0 0 chrX 6006671 6006727 -16416100 + (CTG)n Simple_repeat Simple_repeat 2 57 0 1 630 285 185 0 0 chrX 6008205 6008270 -16414557 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1 630 195 42 0 0 chrX 6010688 6010712 -16412115 + (T)n Simple_repeat Simple_repeat 1 24 0 1 630 291 130 0 0 chrX 6010983 6011037 -16411790 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 1 630 206 32 32 0 chrX 6012455 6012486 -16410341 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 630 23 33 0 0 chrX 6013764 6013794 -16409033 + AT_rich Low_complexity Low_complexity 1 30 0 1 630 228 35 0 0 chrX 6014181 6014210 -16408617 + (TAG)n Simple_repeat Simple_repeat 1 29 0 1 630 26 30 0 0 chrX 6014407 6014440 -16408387 + AT_rich Low_complexity Low_complexity 1 33 0 1 630 31 26 0 0 chrX 6014466 6014504 -16408323 + AT_rich Low_complexity Low_complexity 1 38 0 1 630 188 143 0 23 chrX 6014683 6014726 -16408101 + GA-rich Low_complexity Low_complexity 2 43 0 1 630 201 206 32 0 chrX 6017329 6017392 -16405435 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 630 216 0 0 0 chrX 6020045 6020069 -16402758 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1 630 240 247 0 0 chrX 6020449 6020530 -16402297 - ROO_I LTR Pao -7536 720 640 1 630 268 257 9 9 chrX 6020605 6020719 -16402108 + (TTG)n Simple_repeat Simple_repeat 1 114 0 1 630 28 0 0 0 chrX 6021826 6021854 -16400973 + AT_rich Low_complexity Low_complexity 1 28 0 1 630 242 211 0 0 chrX 6022282 6022339 -16400488 + GA-rich Low_complexity Low_complexity 2 58 0 1 630 304 253 0 10 chrX 6026464 6026560 -16396267 + GA-rich Low_complexity Low_complexity 2 96 0 1 630 250 250 14 14 chrX 6027594 6027667 -16395160 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 630 261 169 12 24 chrX 6027815 6027900 -16394927 + (TG)n Simple_repeat Simple_repeat 2 85 0 1 630 384 59 0 0 chrX 6028510 6028561 -16394266 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 630 217 167 0 23 chrX 6028845 6028888 -16393939 + (TTTAG)n Simple_repeat Simple_repeat 5 46 0 1 630 216 0 0 0 chrX 6029121 6029145 -16393682 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 631 202 208 0 0 chrX 6029652 6029700 -16393127 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 631 264 224 0 0 chrX 6029962 6030029 -16392798 + T-rich Low_complexity Low_complexity 1 67 0 1 631 193 140 35 0 chrX 6030133 6030190 -16392637 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 631 237 117 50 0 chrX 6031628 6031688 -16391139 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 631 228 135 0 0 chrX 6032596 6032633 -16390194 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1 631 188 173 39 0 chrX 6035352 6035404 -16387423 + (TTCGG)n Simple_repeat Simple_repeat 1 54 0 1 631 22 0 0 0 chrX 6035811 6035833 -16386994 + AT_rich Low_complexity Low_complexity 1 22 0 1 631 180 0 0 0 chrX 6037091 6037111 -16385716 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 631 26 30 0 0 chrX 6039037 6039070 -16383757 + AT_rich Low_complexity Low_complexity 1 33 0 1 631 270 227 0 15 chrX 6040000 6040067 -16382760 + (CTG)n Simple_repeat Simple_repeat 3 68 0 1 631 225 271 0 34 chrX 6040092 6040180 -16382647 - ROO_I LTR Pao -7531 725 641 1 631 205 167 0 0 chrX 6040700 6040736 -16382091 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 631 192 40 0 0 chrX 6040935 6040960 -16381867 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 631 21 36 0 0 chrX 6041158 6041186 -16381641 + AT_rich Low_complexity Low_complexity 1 28 0 1 631 180 125 0 0 chrX 6041804 6041836 -16380991 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 631 21 0 0 0 chrX 6043208 6043229 -16379598 + AT_rich Low_complexity Low_complexity 1 21 0 1 631 27 0 0 0 chrX 6044252 6044279 -16378548 + AT_rich Low_complexity Low_complexity 1 27 0 1 631 183 129 0 0 chrX 6045100 6045131 -16377696 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 631 183 204 0 0 chrX 6045475 6045524 -16377303 + A-rich Low_complexity Low_complexity 1 49 0 1 631 39 0 0 0 chrX 6046086 6046125 -16376702 + AT_rich Low_complexity Low_complexity 1 39 0 1 631 26 50 0 0 chrX 6048334 6048374 -16374453 + AT_rich Low_complexity Low_complexity 1 40 0 1 631 437 125 0 11 chrX 6048537 6048626 -16374201 + (AAATG)n Simple_repeat Simple_repeat 3 90 0 1 631 189 196 0 0 chrX 6048788 6048839 -16373988 + (ATG)n Simple_repeat Simple_repeat 3 53 0 1 631 205 200 0 0 chrX 6048947 6048987 -16373840 + (CAA)n Simple_repeat Simple_repeat 1 40 0 1 631 25 75 0 0 chrX 6049460 6049513 -16373314 + AT_rich Low_complexity Low_complexity 1 53 0 1 631 222 37 0 0 chrX 6050843 6050870 -16371957 + (T)n Simple_repeat Simple_repeat 1 27 0 1 631 201 273 0 0 chrX 6051038 6051093 -16371734 + A-rich Low_complexity Low_complexity 1 55 0 1 631 339 85 0 0 chrX 6051313 6051360 -16371467 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 631 255 31 0 0 chrX 6055779 6055811 -16367016 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 631 236 273 0 0 chrX 6059568 6059661 -16363166 + SAR_DM Satellite Satellite 1 93 -1167 1 631 36 23 0 0 chrX 6059675 6059718 -16363109 + AT_rich Low_complexity Low_complexity 1 43 0 1 631 378 42 0 0 chrX 6060017 6060065 -16362762 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 631 201 74 0 0 chrX 6060769 6060796 -16362031 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 631 210 37 0 0 chrX 6061531 6061558 -16361269 + (T)n Simple_repeat Simple_repeat 1 27 0 1 631 22 35 0 0 chrX 6061824 6061853 -16360974 + AT_rich Low_complexity Low_complexity 1 29 0 1 631 205 167 83 0 chrX 6063771 6063819 -16359008 + T-rich Low_complexity Low_complexity 2 53 0 1 631 5694 0 0 0 chrX 6065671 6066329 -16356498 - QUASIMODO_LTR LTR Gypsy 0 658 1 1 631 50366 5 0 0 chrX 6066329 6072388 -16350439 - QUASIMODO_I LTR Gypsy 0 6060 1 1 631 5694 0 0 0 chrX 6072388 6073046 -16349781 - QUASIMODO_LTR LTR Gypsy 0 658 1 1 631 261 0 0 0 chrX 6073310 6073339 -16349488 + (CAGAA)n Simple_repeat Simple_repeat 2 30 0 1 631 31 0 0 0 chrX 6076248 6076279 -16346548 + AT_rich Low_complexity Low_complexity 1 31 0 1 631 233 267 0 0 chrX 6078604 6078679 -16344148 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 631 180 77 0 0 chrX 6082650 6082676 -16340151 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 631 180 0 0 0 chrX 6082847 6082867 -16339960 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 631 333 82 0 0 chrX 6083746 6083795 -16339032 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 631 240 111 0 0 chrX 6085661 6085697 -16337130 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 631 39 0 0 0 chrX 6087438 6087477 -16335350 + AT_rich Low_complexity Low_complexity 1 39 0 1 631 183 139 0 0 chrX 6088398 6088434 -16334393 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 631 30 27 0 0 chrX 6088686 6088723 -16334104 + AT_rich Low_complexity Low_complexity 1 37 0 1 631 25 51 0 0 chrX 6089704 6089743 -16333084 + AT_rich Low_complexity Low_complexity 1 39 0 1 631 270 116 0 0 chrX 6090519 6090562 -16332265 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 631 22 0 0 0 chrX 6094299 6094321 -16328506 + AT_rich Low_complexity Low_complexity 1 22 0 1 631 202 229 0 0 chrX 6098232 6098280 -16324547 + A-rich Low_complexity Low_complexity 1 48 0 1 631 237 119 0 0 chrX 6098344 6098386 -16324441 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 631 186 43 0 0 chrX 6098987 6099010 -16323817 + (CATATA)n Simple_repeat Simple_repeat 6 28 0 1 631 195 146 0 0 chrX 6099035 6099076 -16323751 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 631 2968 209 78 27 chrX 6100426 6100669 -16322158 + SAR_DM Satellite Satellite 251 550 -922 1 631 192 40 0 0 chrX 6100669 6100694 -16322133 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 631 4024 226 22 28 chrX 6100694 6101884 -16320943 + SAR_DM Satellite Satellite 1 1182 -241 1 631 183 100 0 0 chrX 6103222 6103252 -16319575 + (GAATG)n Simple_repeat Simple_repeat 1 30 0 1 631 288 102 0 0 chrX 6104011 6104060 -16318767 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 631 210 71 0 0 chrX 6104955 6104983 -16317844 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 631 213 132 0 0 chrX 6106767 6106805 -16316022 + (T)n Simple_repeat Simple_repeat 1 38 0 1 631 23 0 0 0 chrX 6107803 6107826 -16315001 + AT_rich Low_complexity Low_complexity 1 23 0 1 631 189 107 0 0 chrX 6108063 6108091 -16314736 + (A)n Simple_repeat Simple_repeat 1 28 0 1 631 183 100 0 0 chrX 6108301 6108331 -16314496 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 631 315 0 0 0 chrX 6108479 6108514 -16314313 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 631 396 82 0 0 chrX 6109579 6109640 -16313187 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 631 192 40 0 0 chrX 6110713 6110738 -16312089 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 631 225 0 0 0 chrX 6113777 6113802 -16309025 + (T)n Simple_repeat Simple_repeat 1 25 0 1 631 22 35 0 0 chrX 6115006 6115035 -16307792 + AT_rich Low_complexity Low_complexity 1 29 0 1 631 22 35 0 0 chrX 6116713 6116742 -16306085 + AT_rich Low_complexity Low_complexity 1 29 0 1 631 25 51 0 0 chrX 6117322 6117361 -16305466 + AT_rich Low_complexity Low_complexity 1 39 0 1 631 24 32 0 0 chrX 6118411 6118442 -16304385 + AT_rich Low_complexity Low_complexity 1 31 0 1 631 42 36 0 0 chrX 6119236 6119292 -16303535 + AT_rich Low_complexity Low_complexity 1 56 0 1 631 265 265 20 10 chrX 6119855 6119954 -16302873 + (TG)n Simple_repeat Simple_repeat 1 100 0 1 631 201 147 0 0 chrX 6124508 6124542 -16298285 + (CAG)n Simple_repeat Simple_repeat 2 35 0 1 631 22 0 0 0 chrX 6125876 6125898 -16296929 + AT_rich Low_complexity Low_complexity 1 22 0 1 631 182 193 18 0 chrX 6125945 6126002 -16296825 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 631 261 174 0 0 chrX 6126006 6126075 -16296752 + GA-rich Low_complexity Low_complexity 2 70 0 1 631 219 146 0 0 chrX 6126162 6126203 -16296624 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 631 248 175 0 16 chrX 6126600 6126664 -16296163 + (TTA)n Simple_repeat Simple_repeat 1 63 0 1 631 261 57 0 0 chrX 6126822 6126857 -16295970 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 631 198 176 0 0 chrX 6127199 6127250 -16295577 + A-rich Low_complexity Low_complexity 1 51 0 1 631 206 197 12 62 chrX 6127270 6127351 -16295476 + (CAAAG)n Simple_repeat Simple_repeat 2 78 0 1 631 183 184 0 0 chrX 6128314 6128352 -16294475 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 631 220 191 0 0 chrX 6128457 6128499 -16294328 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 631 192 182 0 0 chrX 6129048 6129092 -16293735 + A-rich Low_complexity Low_complexity 1 44 0 1 631 183 42 0 0 chrX 6129400 6129424 -16293403 + (TATG)n Simple_repeat Simple_repeat 3 26 0 1 631 266 87 22 0 chrX 6129633 6129679 -16293148 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 631 204 221 14 29 chrX 6129720 6129790 -16293037 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 631 216 143 0 0 chrX 6129984 6130026 -16292801 + (CGAAA)n Simple_repeat Simple_repeat 4 45 0 1 631 302 93 0 36 chrX 6130058 6130114 -16292713 + (TTA)n Simple_repeat Simple_repeat 1 54 0 1 631 36 62 0 0 chrX 6130200 6130264 -16292563 + AT_rich Low_complexity Low_complexity 1 64 0 1 631 216 0 0 0 chrX 6130720 6130744 -16292083 + (CAAAC)n Simple_repeat Simple_repeat 3 26 0 1 631 215 31 0 30 chrX 6130759 6130792 -16292035 + (CATCG)n Simple_repeat Simple_repeat 1 32 0 1 631 201 259 0 0 chrX 6134539 6134597 -16288230 + A-rich Low_complexity Low_complexity 1 58 0 1 631 21 36 0 0 chrX 6134982 6135010 -16287817 + AT_rich Low_complexity Low_complexity 1 28 0 1 631 238 87 43 0 chrX 6135012 6135058 -16287769 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 631 210 182 0 22 chrX 6147933 6147978 -16274849 + (CATA)n Simple_repeat Simple_repeat 1 44 0 1 631 224 295 0 0 chrX 6148644 6148705 -16274122 + (CATA)n Simple_repeat Simple_repeat 2 62 0 1 631 208 111 44 0 chrX 6149017 6149062 -16273765 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 631 37 39 0 0 chrX 6149634 6149685 -16273142 + AT_rich Low_complexity Low_complexity 1 51 0 1 631 23 33 0 0 chrX 6152146 6152176 -16270651 + AT_rich Low_complexity Low_complexity 1 30 0 1 631 205 135 39 0 chrX 6152200 6152252 -16270575 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 631 27 0 0 0 chrX 6154155 6154182 -16268645 + AT_rich Low_complexity Low_complexity 1 27 0 1 631 331 21 0 40 chrX 6156500 6156550 -16266277 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 631 241 273 0 13 chrX 6157213 6157291 -16265536 + T-rich Low_complexity Low_complexity 2 78 0 1 631 234 191 21 0 chrX 6157501 6157548 -16265279 + (TATG)n Simple_repeat Simple_repeat 2 49 0 1 631 210 71 0 0 chrX 6158943 6158971 -16263856 + (A)n Simple_repeat Simple_repeat 1 28 0 1 631 210 118 0 0 chrX 6159402 6159436 -16263391 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 631 186 133 0 0 chrX 6159870 6159900 -16262927 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 1 632 344 125 0 15 chrX 6160794 6160859 -16261968 + (CAA)n Simple_repeat Simple_repeat 2 65 0 1 632 186 43 0 0 chrX 6162262 6162285 -16260542 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 632 233 159 0 0 chrX 6162454 6162498 -16260329 + ROO_I LTR Pao 693 736 -7520 1 632 203 179 0 0 chrX 6168028 6168067 -16254760 + (TGG)n Simple_repeat Simple_repeat 2 40 0 1 632 183 42 0 0 chrX 6168559 6168583 -16254244 + (CAGAA)n Simple_repeat Simple_repeat 2 25 0 1 632 357 24 0 0 chrX 6173029 6173071 -16249756 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 632 21 0 0 0 chrX 6175116 6175137 -16247690 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 204 40 0 0 chrX 6175151 6175176 -16247651 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 632 2038 206 94 10 chrX 6175193 6175783 -16247044 + DMRT1B LINE R1 116 731 -4452 1 632 1264 109 36 0 chrX 6175775 6175968 -16246859 + DMRT1A LINE R1 4968 5167 -16 1 632 372 43 0 0 chrX 6177349 6177395 -16245432 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 632 22 0 0 0 chrX 6178017 6178039 -16244788 + AT_rich Low_complexity Low_complexity 1 22 0 1 632 228 184 0 20 chrX 6181877 6181927 -16240900 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 632 22 70 0 0 chrX 6185408 6185451 -16237376 + AT_rich Low_complexity Low_complexity 1 43 0 1 632 214 147 0 0 chrX 6188187 6188221 -16234606 + (CGGAA)n Simple_repeat Simple_repeat 5 38 0 1 632 180 0 0 0 chrX 6188583 6188603 -16234224 + (TAATG)n Simple_repeat Simple_repeat 4 23 0 1 632 209 259 0 0 chrX 6194407 6194504 -16228323 + GA-rich Low_complexity Low_complexity 1 97 0 1 632 21 0 0 0 chrX 6196676 6196697 -16226130 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 27 29 0 0 chrX 6196862 6196896 -16225931 + AT_rich Low_complexity Low_complexity 1 34 0 1 632 24 0 0 0 chrX 6198409 6198433 -16224394 + AT_rich Low_complexity Low_complexity 1 24 0 1 632 31 58 0 0 chrX 6200746 6200798 -16222029 + AT_rich Low_complexity Low_complexity 1 52 0 1 632 199 203 13 13 chrX 6201137 6201212 -16221615 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 632 21 0 0 0 chrX 6203934 6203955 -16218872 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 222 37 0 0 chrX 6204917 6204944 -16217883 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 632 202 0 0 83 chrX 6205244 6205280 -16217547 + (TATG)n Simple_repeat Simple_repeat 3 35 0 1 632 1627 247 40 22 chrX 6206753 6207398 -16215429 + SAR_DM Satellite Satellite 575 1231 -241 1 632 410 246 11 45 chrX 6207257 6207436 -16215391 - XDMR Unknown Unknown -24 337 165 1 632 241 229 0 0 chrX 6208721 6208769 -16214058 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 632 234 62 0 0 chrX 6210217 6210249 -16212578 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 632 192 40 0 0 chrX 6211774 6211799 -16211028 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 632 28 0 0 0 chrX 6211906 6211934 -16210893 + AT_rich Low_complexity Low_complexity 1 28 0 1 632 208 262 0 0 chrX 6215452 6215494 -16207333 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 1 632 210 170 0 21 chrX 6215666 6215714 -16207113 + (ACCTG)n Simple_repeat Simple_repeat 3 49 0 1 632 204 40 0 0 chrX 6215790 6215815 -16207012 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 632 198 103 0 0 chrX 6221347 6221376 -16201451 + (CAT)n Simple_repeat Simple_repeat 1 29 0 1 632 225 0 0 0 chrX 6222951 6222976 -16199851 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 632 23 0 0 0 chrX 6223865 6223888 -16198939 + AT_rich Low_complexity Low_complexity 1 23 0 1 632 214 268 0 0 chrX 6225640 6225696 -16197131 + (CAA)n Simple_repeat Simple_repeat 1 56 0 1 632 205 233 27 14 chrX 6226011 6226085 -16196742 + (CAG)n Simple_repeat Simple_repeat 2 76 0 1 632 225 171 0 0 chrX 6227109 6227150 -16195677 + GA-rich Low_complexity Low_complexity 1 41 0 1 632 21 0 0 0 chrX 6227952 6227973 -16194854 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 3799 5 0 0 chrX 6229298 6229715 -16193112 + TIRANT_LTR LTR Gypsy 1 417 0 1 632 433 0 0 0 chrX 6229715 6229761 -16193066 + TIRANT_I LTR Gypsy 1 46 -7646 1 632 14451 3 1 1 chrX 6229735 6231334 -16191493 + TIRANT_I LTR Gypsy 6094 7692 0 1 632 3799 5 0 0 chrX 6231334 6231751 -16191076 + TIRANT_LTR LTR Gypsy 1 417 0 1 632 35 41 0 0 chrX 6232578 6232627 -16190200 + AT_rich Low_complexity Low_complexity 1 49 0 1 632 189 74 0 0 chrX 6233100 6233127 -16189700 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 632 23 0 0 0 chrX 6233577 6233600 -16189227 + AT_rich Low_complexity Low_complexity 1 23 0 1 632 198 191 0 0 chrX 6236048 6236090 -16186737 + CT-rich Low_complexity Low_complexity 2 43 0 1 632 36 40 0 0 chrX 6238695 6238745 -16184082 + AT_rich Low_complexity Low_complexity 1 50 0 1 632 21 0 0 0 chrX 6238920 6238941 -16183886 + GC_rich Low_complexity Low_complexity 1 21 0 1 632 28 0 0 0 chrX 6240219 6240247 -16182580 + AT_rich Low_complexity Low_complexity 1 28 0 1 632 23 54 0 0 chrX 6240909 6240946 -16181881 + AT_rich Low_complexity Low_complexity 1 37 0 1 632 25 0 0 0 chrX 6243253 6243278 -16179549 + AT_rich Low_complexity Low_complexity 1 25 0 1 632 22 35 0 0 chrX 6244507 6244536 -16178291 + AT_rich Low_complexity Low_complexity 1 29 0 1 632 2755 192 17 21 chrX 6245075 6245733 -16177094 + SAR_DM Satellite Satellite 176 830 -642 1 632 235 330 11 0 chrX 6246651 6246739 -16176088 + CT-rich Low_complexity Low_complexity 5 93 0 1 632 185 163 0 44 chrX 6246844 6246889 -16175938 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 632 239 250 0 18 chrX 6247489 6247546 -16175281 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 632 24 0 0 0 chrX 6247839 6247863 -16174964 + AT_rich Low_complexity Low_complexity 1 24 0 1 632 234 91 0 0 chrX 6250587 6250620 -16172207 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 632 211 169 0 33 chrX 6250807 6250868 -16171959 + (CTA)n Simple_repeat Simple_repeat 2 60 0 1 632 27 29 0 0 chrX 6251145 6251179 -16171648 + AT_rich Low_complexity Low_complexity 1 34 0 1 632 207 69 0 0 chrX 6254505 6254534 -16168293 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 632 194 105 0 26 chrX 6254537 6254576 -16168251 + (GATTG)n Simple_repeat Simple_repeat 3 40 0 1 632 381 22 0 0 chrX 6254801 6254847 -16167980 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 632 21 82 0 0 chrX 6259801 6259850 -16162977 + AT_rich Low_complexity Low_complexity 1 49 0 1 632 26 30 0 0 chrX 6260031 6260064 -16162763 + AT_rich Low_complexity Low_complexity 1 33 0 1 632 204 135 0 0 chrX 6262305 6262342 -16160485 + (CCAA)n Simple_repeat Simple_repeat 4 40 0 1 632 246 279 0 0 chrX 6267939 6268007 -16154820 + CT-rich Low_complexity Low_complexity 1 68 0 1 632 21 0 0 0 chrX 6268912 6268933 -16153894 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 237 65 0 0 chrX 6268945 6268976 -16153851 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 632 207 191 21 0 chrX 6269708 6269755 -16153072 + (CCCA)n Simple_repeat Simple_repeat 1 48 0 1 632 183 42 0 0 chrX 6270435 6270459 -16152368 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 1 632 207 257 26 26 chrX 6271148 6271224 -16151603 + GA-rich Low_complexity Low_complexity 1 76 0 1 632 310 309 0 9 chrX 6271300 6271411 -16151416 + (TG)n Simple_repeat Simple_repeat 1 110 0 1 632 252 143 0 0 chrX 6271674 6271716 -16151111 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 632 221 189 0 0 chrX 6272072 6272109 -16150718 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 632 207 277 0 0 chrX 6272504 6272569 -16150258 + T-rich Low_complexity Low_complexity 1 65 0 1 632 319 145 0 24 chrX 6273223 6273308 -16149519 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 632 180 77 0 0 chrX 6273455 6273481 -16149346 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 632 195 184 0 0 chrX 6273666 6273704 -16149123 + GA-rich Low_complexity Low_complexity 2 39 0 1 632 24 32 0 0 chrX 6275678 6275709 -16147118 + AT_rich Low_complexity Low_complexity 1 31 0 1 632 23 0 0 0 chrX 6276549 6276572 -16146255 + AT_rich Low_complexity Low_complexity 1 23 0 1 632 192 77 0 0 chrX 6276990 6277016 -16145811 + (ACTG)n Simple_repeat Simple_repeat 1 26 0 1 632 1279 259 64 16 chrX 6277549 6277737 -16145090 - SAR_DM Satellite Satellite -579 893 408 1 632 1303 204 28 25 chrX 6277737 6278063 -16144764 + XDMR Unknown Unknown 35 361 0 1 632 1279 259 64 16 chrX 6278063 6278094 -16144733 - SAR_DM Satellite Satellite -579 407 323 1 632 180 0 0 0 chrX 6278095 6278115 -16144712 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 632 25 75 0 0 chrX 6278999 6279052 -16143775 + AT_rich Low_complexity Low_complexity 1 53 0 1 632 1309 225 12 9 chrX 6279059 6279387 -16143440 + XDMR Unknown Unknown 33 361 0 1 632 1263 269 16 22 chrX 6279061 6279514 -16143313 - SAR_DM Satellite Satellite -434 1038 589 1 632 249 98 0 0 chrX 6282297 6282338 -16140489 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 632 231 36 0 0 chrX 6282579 6282607 -16140220 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 632 249 33 0 0 chrX 6282968 6282998 -16139829 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 632 224 59 29 0 chrX 6283039 6283073 -16139754 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 632 180 0 0 0 chrX 6283255 6283275 -16139552 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 632 21 0 0 0 chrX 6283521 6283542 -16139285 + AT_rich Low_complexity Low_complexity 1 21 0 1 632 336 161 0 0 chrX 6284042 6284104 -16138723 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 632 189 121 0 0 chrX 6285033 6285066 -16137761 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 632 180 0 0 0 chrX 6285605 6285625 -16137202 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 632 226 227 26 13 chrX 6286444 6286520 -16136307 + T-rich Low_complexity Low_complexity 2 78 0 1 632 183 80 0 0 chrX 6286747 6286772 -16136055 + (CGA)n Simple_repeat Simple_repeat 2 26 0 1 9 43289 0 6 0 chrX 6286958 6291655 -16131172 + DOC LINE Jockey 3 4725 0 1 633 195 100 0 0 chrX 6292028 6292058 -16130769 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 633 332 230 76 41 chrX 6292952 6293097 -16129730 - XDMR_DM Unknown Unknown -208 152 3 1 633 476 240 31 38 chrX 6292984 6293144 -16129683 + SAR_DM Satellite Satellite 934 1076 -396 1 633 24 32 0 0 chrX 6293355 6293386 -16129441 + AT_rich Low_complexity Low_complexity 1 31 0 1 633 180 0 0 0 chrX 6294270 6294290 -16128537 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 633 1473 249 28 35 chrX 6294291 6294861 -16127966 + SAR_DM Satellite Satellite 323 888 -584 1 633 180 77 0 0 chrX 6295926 6295952 -16126875 + (A)n Simple_repeat Simple_repeat 1 26 0 1 633 240 35 0 0 chrX 6296557 6296586 -16126241 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 633 288 0 0 0 chrX 6296759 6296791 -16126036 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 633 201 121 0 0 chrX 6297111 6297144 -16125683 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 633 261 0 0 0 chrX 6298935 6298964 -16123863 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 633 217 188 42 0 chrX 6299541 6299589 -16123238 + G-rich Low_complexity Low_complexity 3 52 0 1 633 246 62 0 0 chrX 6299704 6299736 -16123091 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 633 192 224 0 0 chrX 6300089 6300156 -16122671 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 633 234 196 0 0 chrX 6303098 6303144 -16119683 + A-rich Low_complexity Low_complexity 1 46 0 1 633 232 27 26 26 chrX 6303947 6303985 -16118842 + (TATAA)n Simple_repeat Simple_repeat 5 42 0 1 633 183 80 0 0 chrX 6305616 6305641 -16117186 + (GAA)n Simple_repeat Simple_repeat 2 26 0 1 633 297 109 0 0 chrX 6306544 6306590 -16116237 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 633 234 164 0 0 chrX 6306686 6306741 -16116086 + (CAGGA)n Simple_repeat Simple_repeat 3 57 0 1 633 291 28 0 0 chrX 6311677 6311713 -16111114 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 633 593 206 42 36 chrX 6312166 6312332 -16110495 - XDMR Unknown Unknown -194 167 1 1 633 1367 264 9 15 chrX 6312192 6312658 -16110169 + SAR_DM Satellite Satellite 576 1038 -434 1 633 25 75 0 0 chrX 6312667 6312720 -16110107 + AT_rich Low_complexity Low_complexity 1 53 0 1 633 180 0 0 0 chrX 6313604 6313624 -16109203 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 633 1075 260 28 13 chrX 6313628 6313656 -16109171 + SAR_DM Satellite Satellite 686 835 -637 1 633 1325 220 12 9 chrX 6313656 6313982 -16108845 - XDMR Unknown Unknown 0 361 35 1 633 1075 260 28 13 chrX 6313982 6314026 -16108801 + SAR_DM Satellite Satellite 836 1089 -383 1 633 204 277 0 0 chrX 6314765 6314812 -16108015 + (CTG)n Simple_repeat Simple_repeat 3 49 0 1 633 249 33 0 0 chrX 6315635 6315665 -16107162 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 633 213 210 0 0 chrX 6316486 6316548 -16106279 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 633 27 29 0 0 chrX 6318233 6318267 -16104560 + AT_rich Low_complexity Low_complexity 1 34 0 1 633 306 73 0 0 chrX 6321250 6321291 -16101536 + (CAA)n Simple_repeat Simple_repeat 3 43 0 1 633 22 0 0 0 chrX 6322283 6322305 -16100522 + AT_rich Low_complexity Low_complexity 1 22 0 1 633 212 169 51 0 chrX 6323349 6323408 -16099419 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 1 633 47753 5 0 0 chrX 6324080 6329301 -16093526 - DMRT1B LINE R1 0 5183 1 1 633 252 59 0 0 chrX 6329480 6329514 -16093313 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 633 207 263 18 0 chrX 6329661 6329718 -16093109 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 633 195 42 0 0 chrX 6331212 6331236 -16091591 + (T)n Simple_repeat Simple_repeat 1 24 0 1 633 186 43 0 0 chrX 6331796 6331819 -16091008 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 633 233 272 0 0 chrX 6332072 6332153 -16090674 + T-rich Low_complexity Low_complexity 1 81 0 1 633 327 49 0 0 chrX 6332314 6332355 -16090472 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 633 189 0 0 0 chrX 6333420 6333441 -16089386 + (ACCG)n Simple_repeat Simple_repeat 2 22 0 1 633 189 0 0 0 chrX 6333604 6333625 -16089202 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 633 202 216 0 0 chrX 6336148 6336185 -16086642 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 633 185 0 40 0 chrX 6336459 6336484 -16086343 + (TAAAAA)n Simple_repeat Simple_repeat 4 29 0 1 633 23 0 0 0 chrX 6336966 6336989 -16085838 + AT_rich Low_complexity Low_complexity 1 23 0 1 633 228 35 0 0 chrX 6337284 6337313 -16085514 + (TTG)n Simple_repeat Simple_repeat 1 29 0 1 633 222 105 0 0 chrX 6337472 6337510 -16085317 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 633 216 163 0 0 chrX 6337954 6337997 -16084830 + (TTG)n Simple_repeat Simple_repeat 3 45 0 1 633 291 122 0 0 chrX 6338236 6338285 -16084542 + (CAGTA)n Simple_repeat Simple_repeat 5 53 0 1 633 3614 5 7 7 chrX 6339390 6339804 -16083023 - DM297_LTR LTR Gypsy 0 414 1 1 633 5482 11 42 0 chrX 6339804 6340470 -16082357 - DM297_I LTR Gypsy 0 6167 5474 1 633 37574 7 0 1 chrX 6340460 6344677 -16078150 - DM297_I LTR Gypsy -1953 4214 1 1 633 3614 5 7 7 chrX 6344677 6345091 -16077736 - DM297_LTR LTR Gypsy 0 414 1 1 633 227 270 0 0 chrX 6345699 6345762 -16077065 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 633 195 42 0 0 chrX 6345950 6345974 -16076853 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 633 219 36 0 0 chrX 6346463 6346491 -16076336 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 633 205 167 0 0 chrX 6347083 6347119 -16075708 + (CATTC)n Simple_repeat Simple_repeat 3 38 0 1 633 207 146 0 0 chrX 6348765 6348806 -16074021 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 633 38 0 0 0 chrX 6349146 6349184 -16073643 + AT_rich Low_complexity Low_complexity 1 38 0 1 633 221 215 15 15 chrX 6349783 6349849 -16072978 + T-rich Low_complexity Low_complexity 6 71 0 1 633 231 125 0 0 chrX 6350118 6350158 -16072669 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 633 273 57 0 0 chrX 6353208 6353243 -16069584 + (CAACT)n Simple_repeat Simple_repeat 4 38 0 1 633 287 130 0 18 chrX 6353691 6353746 -16069081 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 633 195 100 0 0 chrX 6354215 6354245 -16068582 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 633 22 70 0 0 chrX 6354448 6354491 -16068336 + AT_rich Low_complexity Low_complexity 1 43 0 1 633 276 30 0 0 chrX 6354674 6354707 -16068120 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 633 217 170 21 0 chrX 6354905 6354952 -16067875 + CT-rich Low_complexity Low_complexity 1 48 0 1 633 392 97 16 0 chrX 6355460 6355522 -16067305 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 633 243 0 0 0 chrX 6356136 6356163 -16066664 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 633 180 0 0 0 chrX 6356745 6356765 -16066062 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 633 201 279 15 0 chrX 6358184 6358252 -16064575 + A-rich Low_complexity Low_complexity 1 69 0 1 633 291 54 0 0 chrX 6358374 6358411 -16064416 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 633 312 148 0 0 chrX 6358539 6358600 -16064227 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 633 300 91 0 0 chrX 6358675 6358719 -16064108 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 1 633 296 133 0 16 chrX 6358905 6358966 -16063861 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 633 189 74 0 0 chrX 6359216 6359243 -16063584 + (T)n Simple_repeat Simple_repeat 1 27 0 1 633 180 152 0 0 chrX 6360466 6360499 -16062328 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 633 252 100 0 0 chrX 6360890 6360930 -16061897 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 633 216 218 0 0 chrX 6362155 6362242 -16060585 + (CTG)n Simple_repeat Simple_repeat 1 87 0 1 633 198 0 0 0 chrX 6363411 6363433 -16059394 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 633 327 113 0 0 chrX 6365040 6365093 -16057734 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 633 24 32 0 0 chrX 6365627 6365658 -16057169 + AT_rich Low_complexity Low_complexity 1 31 0 1 633 28 0 0 0 chrX 6366534 6366562 -16056265 + AT_rich Low_complexity Low_complexity 1 28 0 1 633 187 194 0 46 chrX 6367386 6367451 -16055376 + (TATG)n Simple_repeat Simple_repeat 3 64 0 1 633 27 0 0 0 chrX 6368357 6368384 -16054443 + AT_rich Low_complexity Low_complexity 1 27 0 1 633 24 32 0 0 chrX 6370197 6370228 -16052599 + AT_rich Low_complexity Low_complexity 1 31 0 1 633 180 0 0 0 chrX 6371113 6371133 -16051694 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 633 351 113 0 0 chrX 6371258 6371311 -16051516 + (TTCA)n Simple_repeat Simple_repeat 2 54 0 1 633 528 263 35 74 chrX 6371662 6371945 -16050882 + SAR_DM Satellite Satellite 998 1269 -203 1 633 1316 228 12 9 chrX 6371742 6372070 -16050757 - XDMR Unknown Unknown 0 361 33 1 633 25 75 0 0 chrX 6372077 6372130 -16050697 + AT_rich Low_complexity Low_complexity 1 53 0 1 633 180 0 0 0 chrX 6373014 6373034 -16049793 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 633 788 246 17 8 chrX 6373035 6373273 -16049554 + SAR_DM Satellite Satellite 323 562 -910 1 633 895 192 70 12 chrX 6373066 6373309 -16049518 - XDMR Unknown Unknown 0 361 105 1 633 672 261 19 47 chrX 6373278 6373535 -16049292 - XDMR Unknown Unknown -43 318 69 1 633 333 47 0 0 chrX 6374721 6374764 -16048063 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1 633 231 23 22 65 chrX 6376494 6376540 -16046287 + (GTGTG)n Simple_repeat Simple_repeat 1 44 0 1 633 204 40 0 0 chrX 6376678 6376703 -16046124 + (T)n Simple_repeat Simple_repeat 1 25 0 1 633 231 36 0 0 chrX 6377333 6377361 -16045466 + (A)n Simple_repeat Simple_repeat 1 28 0 1 633 180 111 0 0 chrX 6379034 6379061 -16043766 + (CCG)n Simple_repeat Simple_repeat 1 27 0 1 633 227 204 0 0 chrX 6379101 6379145 -16043682 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 633 222 91 0 0 chrX 6379238 6379271 -16043556 + (CACTT)n Simple_repeat Simple_repeat 4 36 0 1 633 192 152 0 0 chrX 6379715 6379748 -16043079 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 633 266 132 0 19 chrX 6382036 6382090 -16040737 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 633 183 42 0 0 chrX 6382774 6382798 -16040029 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 633 201 74 0 0 chrX 6386103 6386130 -16036697 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 633 25 31 0 0 chrX 6386192 6386224 -16036603 + AT_rich Low_complexity Low_complexity 1 32 0 1 633 318 67 0 0 chrX 6386634 6386679 -16036148 + (A)n Simple_repeat Simple_repeat 1 45 0 1 633 220 271 0 0 chrX 6388643 6388702 -16034125 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 633 234 116 0 0 chrX 6388925 6388968 -16033859 + (T)n Simple_repeat Simple_repeat 1 43 0 1 633 205 211 0 34 chrX 6389402 6389461 -16033366 + (TTTCG)n Simple_repeat Simple_repeat 4 60 0 1 633 246 219 40 27 chrX 6389592 6389667 -16033160 + GA-rich Low_complexity Low_complexity 3 78 0 1 633 26 30 0 0 chrX 6389792 6389825 -16033002 + AT_rich Low_complexity Low_complexity 1 33 0 1 633 312 27 0 0 chrX 6390868 6390905 -16031922 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 633 28 0 0 0 chrX 6390994 6391022 -16031805 + AT_rich Low_complexity Low_complexity 1 28 0 1 633 218 295 0 0 chrX 6391088 6391166 -16031661 + (TG)n Simple_repeat Simple_repeat 1 78 0 1 633 284 119 17 0 chrX 6391764 6391823 -16031004 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 633 21 95 0 0 chrX 6392232 6392295 -16030532 + AT_rich Low_complexity Low_complexity 1 63 0 1 633 256 202 23 35 chrX 6392782 6392869 -16029958 + (TG)n Simple_repeat Simple_repeat 1 86 0 1 633 251 288 0 0 chrX 6392991 6393050 -16029777 + (CATATA)n Simple_repeat Simple_repeat 5 63 0 1 633 188 111 28 0 chrX 6393568 6393604 -16029223 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 633 186 103 0 0 chrX 6394736 6394765 -16028062 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 633 22 0 0 0 chrX 6395366 6395388 -16027439 + AT_rich Low_complexity Low_complexity 1 22 0 1 633 242 245 0 0 chrX 6396069 6396122 -16026705 + T-rich Low_complexity Low_complexity 1 53 0 1 633 21 57 0 0 chrX 6397519 6397554 -16025273 + AT_rich Low_complexity Low_complexity 1 35 0 1 633 318 143 0 0 chrX 6399075 6399138 -16023689 + (ATG)n Simple_repeat Simple_repeat 3 65 0 1 633 192 77 0 0 chrX 6399758 6399784 -16023043 + (GCTG)n Simple_repeat Simple_repeat 3 28 0 1 633 207 69 0 0 chrX 6400176 6400205 -16022622 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 633 201 225 0 0 chrX 6400388 6400428 -16022399 + (GCTG)n Simple_repeat Simple_repeat 3 42 0 1 633 297 109 0 0 chrX 6401372 6401418 -16021409 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 633 180 0 0 0 chrX 6402105 6402125 -16020702 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 633 234 143 0 0 chrX 6403135 6403184 -16019643 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 633 31 26 0 0 chrX 6404324 6404362 -16018465 + AT_rich Low_complexity Low_complexity 1 38 0 1 633 275 78 62 0 chrX 6404520 6404584 -16018243 + (TAAAA)n Simple_repeat Simple_repeat 2 69 0 1 633 21 36 0 0 chrX 6404709 6404737 -16018090 + AT_rich Low_complexity Low_complexity 1 28 0 1 633 26 30 0 0 chrX 6405214 6405247 -16017580 + AT_rich Low_complexity Low_complexity 1 33 0 1 633 23 33 0 0 chrX 6405891 6405921 -16016906 + AT_rich Low_complexity Low_complexity 1 30 0 1 633 201 74 0 0 chrX 6406310 6406337 -16016490 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 633 195 42 0 0 chrX 6406451 6406475 -16016352 + (AGTTG)n Simple_repeat Simple_repeat 3 26 0 1 633 180 0 0 0 chrX 6406594 6406614 -16016213 + (A)n Simple_repeat Simple_repeat 1 20 0 1 633 24 0 0 0 chrX 6407126 6407150 -16015677 + AT_rich Low_complexity Low_complexity 1 24 0 1 633 243 0 0 0 chrX 6407413 6407440 -16015387 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 633 195 146 0 0 chrX 6407871 6407912 -16014915 + (CCTA)n Simple_repeat Simple_repeat 3 43 0 1 633 204 262 0 16 chrX 6408784 6408846 -16013981 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 633 21 0 0 0 chrX 6409080 6409101 -16013726 + AT_rich Low_complexity Low_complexity 1 21 0 1 633 243 88 0 0 chrX 6409521 6409555 -16013272 + (A)n Simple_repeat Simple_repeat 1 34 0 1 633 183 100 0 0 chrX 6411470 6411500 -16011327 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 1 633 246 32 0 0 chrX 6411713 6411744 -16011083 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 633 189 121 0 0 chrX 6412741 6412774 -16010053 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 633 225 0 0 0 chrX 6415554 6415579 -16007248 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 633 202 233 0 0 chrX 6416486 6416529 -16006298 + (CTA)n Simple_repeat Simple_repeat 1 43 0 1 633 216 167 0 0 chrX 6417973 6418009 -16004818 + (CTG)n Simple_repeat Simple_repeat 3 38 0 1 633 204 97 0 0 chrX 6418563 6418594 -16004233 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 633 276 188 0 0 chrX 6419096 6419160 -16003667 + GA-rich Low_complexity Low_complexity 5 68 0 1 633 202 182 0 0 chrX 6419294 6419327 -16003500 + (CAG)n Simple_repeat Simple_repeat 2 34 0 1 633 183 146 0 0 chrX 6419423 6419464 -16003363 + (TCG)n Simple_repeat Simple_repeat 2 42 0 1 633 24 32 0 0 chrX 6421968 6421999 -16000828 + AT_rich Low_complexity Low_complexity 1 31 0 1 634 21 36 0 0 chrX 6425020 6425048 -15997779 + AT_rich Low_complexity Low_complexity 1 28 0 1 634 213 39 0 0 chrX 6426711 6426737 -15996090 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 634 192 111 0 0 chrX 6428317 6428353 -15994474 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 634 405 200 0 0 chrX 6429846 6429946 -15992881 + ROO_I LTR Pao 643 742 -7514 1 634 308 128 115 0 chrX 6430528 6430606 -15992221 + ROO_I LTR Pao 641 727 -7529 1 634 201 94 0 0 chrX 6431440 6431472 -15991355 + (CCAA)n Simple_repeat Simple_repeat 3 34 0 1 634 213 39 0 0 chrX 6431711 6431737 -15991090 + (TTAG)n Simple_repeat Simple_repeat 3 28 0 1 634 261 83 0 0 chrX 6432189 6432225 -15990602 + (CATATA)n Simple_repeat Simple_repeat 1 36 0 1 634 235 232 0 35 chrX 6434177 6434235 -15988592 + T-rich Low_complexity Low_complexity 2 57 0 1 634 24 0 0 0 chrX 6434895 6434919 -15987908 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 237 83 0 0 chrX 6435396 6435432 -15987395 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 634 24 0 0 0 chrX 6435915 6435939 -15986888 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 25 0 0 0 chrX 6437724 6437749 -15985078 + AT_rich Low_complexity Low_complexity 1 25 0 1 634 237 146 0 0 chrX 6438807 6438855 -15983972 + (ATTCG)n Simple_repeat Simple_repeat 2 49 0 1 634 204 222 0 0 chrX 6438952 6439006 -15983821 + A-rich Low_complexity Low_complexity 1 54 0 1 634 21 0 0 0 chrX 6439178 6439199 -15983628 + AT_rich Low_complexity Low_complexity 1 21 0 1 634 27 0 0 0 chrX 6439663 6439690 -15983137 + AT_rich Low_complexity Low_complexity 1 27 0 1 634 194 192 0 19 chrX 6441319 6441372 -15981455 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 1 634 183 42 0 0 chrX 6443463 6443487 -15979340 + (A)n Simple_repeat Simple_repeat 1 24 0 1 634 189 107 0 0 chrX 6444136 6444164 -15978663 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 634 203 125 0 24 chrX 6444196 6444237 -15978590 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 634 226 220 0 0 chrX 6445019 6445069 -15977758 + CT-rich Low_complexity Low_complexity 2 51 0 1 634 220 335 6 6 chrX 6446986 6447148 -15975679 + (CAG)n Simple_repeat Simple_repeat 2 163 0 1 634 23 33 0 0 chrX 6448839 6448869 -15973958 + AT_rich Low_complexity Low_complexity 1 30 0 1 634 238 206 0 16 chrX 6449032 6449096 -15973731 + (CCA)n Simple_repeat Simple_repeat 2 64 0 1 634 198 136 0 0 chrX 6449328 6449372 -15973455 + (A)n Simple_repeat Simple_repeat 1 44 0 1 634 212 244 13 13 chrX 6454261 6454340 -15968487 + (CCA)n Simple_repeat Simple_repeat 2 80 0 1 634 727 245 63 30 chrX 6456406 6456709 -15966118 - SAR_DM Satellite Satellite -553 919 607 1 634 3799 5 0 0 chrX 6456905 6457322 -15965505 - TIRANT_LTR LTR Gypsy 0 417 1 1 634 68111 2 0 1 chrX 6457322 6464913 -15957914 - TIRANT_I LTR Gypsy 0 7692 1 1 634 3799 5 0 0 chrX 6464913 6465330 -15957497 - TIRANT_LTR LTR Gypsy 0 417 1 1 634 32 26 0 0 chrX 6465784 6465823 -15957004 + AT_rich Low_complexity Low_complexity 1 39 0 1 634 180 0 0 0 chrX 6466051 6466071 -15956756 + (A)n Simple_repeat Simple_repeat 1 20 0 1 634 276 154 0 0 chrX 6466329 6466381 -15956446 + (ATG)n Simple_repeat Simple_repeat 1 52 0 1 634 240 276 0 0 chrX 6466569 6466645 -15956182 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 634 213 39 0 0 chrX 6469393 6469419 -15953408 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 634 24 0 0 0 chrX 6469599 6469623 -15953204 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 23 54 0 0 chrX 6470233 6470270 -15952557 + AT_rich Low_complexity Low_complexity 1 37 0 1 634 227 280 0 93 chrX 6472313 6472431 -15950396 + ROO_I LTR Pao 619 725 -7531 1 634 230 384 0 0 chrX 6473734 6473911 -15948916 + (CAG)n Simple_repeat Simple_repeat 2 178 0 1 634 231 231 82 18 chrX 6476575 6476685 -15946142 + ROO_I LTR Pao 645 761 -7495 1 634 221 98 0 24 chrX 6477238 6477280 -15945547 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1 634 302 98 0 19 chrX 6477982 6478034 -15944793 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1 634 249 119 0 0 chrX 6478549 6478591 -15944236 + (TTACG)n Simple_repeat Simple_repeat 4 45 0 1 634 247 104 0 40 chrX 6478613 6478663 -15944164 + (ATTG)n Simple_repeat Simple_repeat 1 48 0 1 634 29 0 0 0 chrX 6479566 6479595 -15943232 + AT_rich Low_complexity Low_complexity 1 29 0 1 634 25 0 0 0 chrX 6479671 6479696 -15943131 + AT_rich Low_complexity Low_complexity 1 25 0 1 634 225 132 0 0 chrX 6480030 6480068 -15942759 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 634 208 244 0 0 chrX 6480768 6480813 -15942014 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 1 634 183 98 0 73 chrX 6481525 6481580 -15941247 + A-rich Low_complexity Low_complexity 6 56 0 1 634 219 217 0 0 chrX 6481628 6481688 -15941139 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 634 31 26 0 0 chrX 6481955 6481993 -15940834 + AT_rich Low_complexity Low_complexity 1 38 0 1 634 249 83 0 0 chrX 6482485 6482521 -15940306 + (CAG)n Simple_repeat Simple_repeat 1 36 0 1 634 23 0 0 0 chrX 6484653 6484676 -15938151 + AT_rich Low_complexity Low_complexity 1 23 0 1 634 234 0 0 0 chrX 6485090 6485116 -15937711 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1 634 25 31 0 0 chrX 6485559 6485591 -15937236 + AT_rich Low_complexity Low_complexity 1 32 0 1 634 235 343 0 0 chrX 6487016 6487083 -15935744 + (CTGGGG)n Simple_repeat Simple_repeat 4 70 0 1 634 23 0 0 0 chrX 6490610 6490633 -15932194 + AT_rich Low_complexity Low_complexity 1 23 0 1 634 21 57 0 0 chrX 6493671 6493706 -15929121 + AT_rich Low_complexity Low_complexity 1 35 0 1 634 23 68 0 0 chrX 6493911 6493955 -15928872 + AT_rich Low_complexity Low_complexity 1 44 0 1 634 203 196 71 0 chrX 6494839 6494895 -15927932 + (CATA)n Simple_repeat Simple_repeat 1 60 0 1 634 216 0 0 0 chrX 6497040 6497064 -15925763 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1 634 225 220 17 0 chrX 6499114 6499173 -15923654 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 1 634 202 305 0 0 chrX 6499334 6499393 -15923434 + G-rich Low_complexity Low_complexity 1 59 0 1 634 2505 0 0 4 chrX 6499563 6499839 -15922988 - BURDOCK_LTR LTR Gypsy 0 275 1 1 634 1511 0 0 0 chrX 6499840 6500000 -15922827 - BURDOCK_I LTR Gypsy 0 5860 5701 1 634 7521 0 1 1 chrX 6500000 6500833 -15921994 - BURDOCK_I LTR Gypsy -160 5700 4868 1 634 13115 4 0 2 chrX 6500809 6502252 -15920575 - BURDOCK_I LTR Gypsy -4420 1440 1 1 634 2505 0 0 4 chrX 6502252 6502528 -15920299 - BURDOCK_LTR LTR Gypsy 0 275 1 1 634 303 71 0 0 chrX 6502859 6502901 -15919926 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 634 180 0 0 0 chrX 6504392 6504412 -15918415 + (AGATG)n Simple_repeat Simple_repeat 1 20 0 1 634 279 0 0 0 chrX 6505409 6505440 -15917387 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 634 195 42 0 0 chrX 6505589 6505613 -15917214 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 1 634 212 73 109 0 chrX 6509939 6509994 -15912833 + (TGGA)n Simple_repeat Simple_repeat 2 62 0 1 634 237 139 0 0 chrX 6510295 6510338 -15912489 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 634 25 31 0 0 chrX 6510481 6510513 -15912314 + AT_rich Low_complexity Low_complexity 1 32 0 1 634 203 250 0 0 chrX 6511487 6511535 -15911292 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 634 402 21 0 0 chrX 6512529 6512576 -15910251 + (CATAC)n Simple_repeat Simple_repeat 3 49 0 1 634 303 71 0 0 chrX 6513202 6513244 -15909583 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1 634 194 62 0 30 chrX 6513302 6513335 -15909492 + (AAATG)n Simple_repeat Simple_repeat 5 36 0 1 634 205 195 0 0 chrX 6514258 6514299 -15908528 + T-rich Low_complexity Low_complexity 1 41 0 1 634 189 94 0 0 chrX 6514672 6514704 -15908123 + (CGAA)n Simple_repeat Simple_repeat 3 34 0 1 634 225 224 0 56 chrX 6515256 6515346 -15907481 + A-rich Low_complexity Low_complexity 5 89 0 1 634 240 228 0 0 chrX 6515446 6515503 -15907324 + (CAA)n Simple_repeat Simple_repeat 3 59 0 1 634 267 103 0 0 chrX 6516659 6516698 -15906129 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 634 21 0 0 0 chrX 6518177 6518198 -15904629 + AT_rich Low_complexity Low_complexity 1 21 0 1 634 255 61 0 0 chrX 6518327 6518360 -15904467 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 634 225 65 0 0 chrX 6519418 6519449 -15903378 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 634 273 231 0 0 chrX 6519542 6519607 -15903220 + T-rich Low_complexity Low_complexity 1 65 0 1 634 23 0 0 0 chrX 6520573 6520596 -15902231 + AT_rich Low_complexity Low_complexity 1 23 0 1 634 195 170 0 0 chrX 6522755 6522802 -15900025 + A-rich Low_complexity Low_complexity 1 47 0 1 634 208 139 0 0 chrX 6522844 6522880 -15899947 + (GATTG)n Simple_repeat Simple_repeat 5 40 0 1 634 207 0 0 0 chrX 6524274 6524297 -15898530 + (A)n Simple_repeat Simple_repeat 1 23 0 1 634 21 0 0 0 chrX 6524569 6524590 -15898237 + AT_rich Low_complexity Low_complexity 1 21 0 1 634 206 62 0 30 chrX 6525172 6525205 -15897622 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 1 634 189 139 0 0 chrX 6525798 6525841 -15896986 + (T)n Simple_repeat Simple_repeat 1 43 0 1 634 183 80 0 0 chrX 6525863 6525888 -15896939 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1 634 265 282 0 41 chrX 6526026 6526148 -15896679 + T-rich Low_complexity Low_complexity 2 118 0 1 634 21 57 0 0 chrX 6526421 6526456 -15896371 + AT_rich Low_complexity Low_complexity 1 35 0 1 634 22 80 0 0 chrX 6527294 6527344 -15895483 + AT_rich Low_complexity Low_complexity 1 50 0 1 634 25 51 0 0 chrX 6527791 6527830 -15894997 + AT_rich Low_complexity Low_complexity 1 39 0 1 634 22 0 0 0 chrX 6533884 6533906 -15888921 + AT_rich Low_complexity Low_complexity 1 22 0 1 634 219 88 0 0 chrX 6534462 6534496 -15888331 + (A)n Simple_repeat Simple_repeat 1 34 0 1 634 21 36 0 0 chrX 6534948 6534976 -15887851 + AT_rich Low_complexity Low_complexity 1 28 0 1 634 28 29 0 0 chrX 6535190 6535225 -15887602 + AT_rich Low_complexity Low_complexity 1 35 0 1 634 216 0 0 0 chrX 6535368 6535392 -15887435 + (CTG)n Simple_repeat Simple_repeat 2 25 0 1 634 26 0 0 0 chrX 6535849 6535875 -15886952 + AT_rich Low_complexity Low_complexity 1 26 0 1 634 217 250 0 15 chrX 6537279 6537344 -15885483 + GA-rich Low_complexity Low_complexity 1 64 0 1 634 219 245 0 0 chrX 6537677 6537726 -15885101 + (TATG)n Simple_repeat Simple_repeat 3 51 0 1 634 24 32 0 0 chrX 6537893 6537924 -15884903 + AT_rich Low_complexity Low_complexity 1 31 0 1 634 23 68 0 0 chrX 6539003 6539047 -15883780 + AT_rich Low_complexity Low_complexity 1 44 0 1 634 215 236 0 0 chrX 6539594 6539649 -15883178 + T-rich Low_complexity Low_complexity 1 55 0 1 634 255 239 0 0 chrX 6540111 6540182 -15882645 + ROO_I LTR Pao 665 735 -7521 1 634 294 29 0 0 chrX 6540316 6540351 -15882476 + (CAG)n Simple_repeat Simple_repeat 3 37 0 1 634 249 98 0 0 chrX 6540409 6540450 -15882377 + (GAAAA)n Simple_repeat Simple_repeat 5 45 0 1 634 263 28 0 27 chrX 6545718 6545755 -15877072 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 634 250 80 40 0 chrX 6546661 6546711 -15876116 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 634 24 0 0 0 chrX 6546854 6546878 -15875949 + AT_rich Low_complexity Low_complexity 1 24 0 1 634 22 22 0 62 chrX 6547043 6547091 -15875736 + AT_rich Low_complexity Low_complexity 1 45 0 1 634 288 53 0 0 chrX 6547094 6547132 -15875695 + (A)n Simple_repeat Simple_repeat 1 38 0 1 634 22 0 0 0 chrX 6549045 6549067 -15873760 + AT_rich Low_complexity Low_complexity 1 22 0 1 634 270 0 0 0 chrX 6550727 6550757 -15872070 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 634 192 200 0 0 chrX 6551295 6551340 -15871487 + CT-rich Low_complexity Low_complexity 1 45 0 1 634 219 167 0 0 chrX 6551963 6552005 -15870822 + (CAA)n Simple_repeat Simple_repeat 1 42 0 1 634 361 188 0 56 chrX 6552200 6552307 -15870520 + ROO_I LTR Pao 643 743 -7513 1 635 22 0 0 0 chrX 6554009 6554031 -15868796 + AT_rich Low_complexity Low_complexity 1 22 0 1 635 25 0 0 0 chrX 6554334 6554359 -15868468 + AT_rich Low_complexity Low_complexity 1 25 0 1 635 27 62 0 0 chrX 6556908 6556956 -15865871 + AT_rich Low_complexity Low_complexity 1 48 0 1 635 207 0 0 0 chrX 6557868 6557891 -15864936 + (T)n Simple_repeat Simple_repeat 1 23 0 1 635 23 0 0 0 chrX 6558787 6558810 -15864017 + AT_rich Low_complexity Low_complexity 1 23 0 1 635 210 37 0 0 chrX 6560725 6560752 -15862075 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 635 182 62 31 0 chrX 6561644 6561676 -15861151 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 635 32 26 0 0 chrX 6562202 6562241 -15860586 + AT_rich Low_complexity Low_complexity 1 39 0 1 635 182 118 29 0 chrX 6562950 6562984 -15859843 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 635 293 156 0 13 chrX 6563180 6563258 -15859569 + CT-rich Low_complexity Low_complexity 2 78 0 1 635 393 75 0 0 chrX 6563466 6563519 -15859308 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 635 279 54 0 0 chrX 6564538 6564575 -15858252 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 635 183 42 0 0 chrX 6565024 6565048 -15857779 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 635 216 0 0 0 chrX 6565443 6565467 -15857360 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 635 30 0 0 0 chrX 6565664 6565694 -15857133 + AT_rich Low_complexity Low_complexity 1 30 0 1 635 198 103 0 0 chrX 6565981 6566010 -15856817 + (T)n Simple_repeat Simple_repeat 1 29 0 1 635 211 224 0 0 chrX 6566118 6566167 -15856660 + (CCA)n Simple_repeat Simple_repeat 3 51 0 1 635 34 42 0 0 chrX 6568295 6568343 -15854484 + AT_rich Low_complexity Low_complexity 1 48 0 1 635 199 54 54 0 chrX 6572451 6572488 -15850339 + (TTG)n Simple_repeat Simple_repeat 3 41 0 1 635 180 0 0 0 chrX 6576172 6576192 -15846635 + (CCAA)n Simple_repeat Simple_repeat 1 20 0 1 635 212 111 22 0 chrX 6578337 6578382 -15844445 + (CGAAA)n Simple_repeat Simple_repeat 3 48 0 1 635 24 0 0 0 chrX 6578495 6578519 -15844308 + AT_rich Low_complexity Low_complexity 1 24 0 1 635 256 244 12 0 chrX 6579509 6579591 -15843236 + (CAG)n Simple_repeat Simple_repeat 2 84 0 1 635 183 114 0 0 chrX 6584002 6584037 -15838790 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 635 195 100 0 0 chrX 6585652 6585682 -15837145 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 635 196 47 21 85 chrX 6586650 6586697 -15836130 + (CTG)n Simple_repeat Simple_repeat 3 46 0 1 635 488 156 0 9 chrX 6586934 6587044 -15835783 + (CTG)n Simple_repeat Simple_repeat 1 109 0 1 635 281 263 10 10 chrX 6587631 6587731 -15835096 + (CTG)n Simple_repeat Simple_repeat 1 100 0 1 635 356 200 0 31 chrX 6587733 6587831 -15834996 - ROO_I LTR Pao -7516 740 646 1 635 345 117 0 0 chrX 6588060 6588120 -15834707 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 635 222 284 14 0 chrX 6588603 6588677 -15834150 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 635 21 0 0 0 chrX 6589172 6589193 -15833634 + AT_rich Low_complexity Low_complexity 1 21 0 1 635 28 29 0 0 chrX 6589612 6589647 -15833180 + AT_rich Low_complexity Low_complexity 1 35 0 1 635 220 221 18 55 chrX 6589930 6590040 -15832787 + T-rich Low_complexity Low_complexity 4 109 0 1 635 347 89 0 18 chrX 6590192 6590249 -15832578 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 635 351 105 0 0 chrX 6590424 6590481 -15832346 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 635 21 0 0 0 chrX 6590782 6590803 -15832024 + AT_rich Low_complexity Low_complexity 1 21 0 1 635 203 140 20 0 chrX 6590905 6590955 -15831872 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 635 207 69 0 0 chrX 6591195 6591224 -15831603 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 635 180 0 0 0 chrX 6591854 6591874 -15830953 + (CTG)n Simple_repeat Simple_repeat 1 20 0 1 635 222 37 0 0 chrX 6591898 6591925 -15830902 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 635 223 259 0 17 chrX 6593643 6593702 -15829125 + (CAA)n Simple_repeat Simple_repeat 2 59 0 1 635 185 65 0 31 chrX 6593973 6594005 -15828822 + (CAAAG)n Simple_repeat Simple_repeat 5 35 0 1 635 208 111 22 22 chrX 6594265 6594311 -15828516 + (CAG)n Simple_repeat Simple_repeat 2 47 0 1 635 214 281 16 0 chrX 6594452 6594516 -15828311 + (CATA)n Simple_repeat Simple_repeat 3 67 0 1 635 23 0 0 0 chrX 6596694 6596717 -15826110 + AT_rich Low_complexity Low_complexity 1 23 0 1 635 210 193 0 0 chrX 6596848 6596905 -15825922 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 635 186 103 0 0 chrX 6600622 6600651 -15822176 + (GTATG)n Simple_repeat Simple_repeat 2 30 0 1 635 207 188 0 0 chrX 6600956 6601004 -15821823 + (CAGTT)n Simple_repeat Simple_repeat 3 50 0 1 635 24 0 0 0 chrX 6601396 6601420 -15821407 + AT_rich Low_complexity Low_complexity 1 24 0 1 635 240 200 0 0 chrX 6606494 6606559 -15816268 + (CAG)n Simple_repeat Simple_repeat 2 66 0 1 635 230 202 0 67 chrX 6607979 6608069 -15814758 + ROO_I LTR Pao 643 726 -7530 1 635 1743 244 21 60 chrX 6608940 6609654 -15813173 + SAR_DM Satellite Satellite 585 1270 -202 1 635 371 266 108 13 chrX 6609474 6609706 -15813121 - XDMR Unknown Unknown -22 339 86 1 635 298 185 0 32 chrX 6610326 6610421 -15812406 + ROO_I LTR Pao 642 733 -7523 1 635 280 186 0 117 chrX 6610461 6610589 -15812238 + ROO_I LTR Pao 629 741 -7515 1 635 30 27 0 0 chrX 6611703 6611740 -15811087 + AT_rich Low_complexity Low_complexity 1 37 0 1 635 255 125 0 0 chrX 6611822 6611862 -15810965 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 635 205 88 0 29 chrX 6612688 6612723 -15810104 + (TTTTA)n Simple_repeat Simple_repeat 4 37 0 1 635 30 69 0 0 chrX 6613019 6613077 -15809750 + AT_rich Low_complexity Low_complexity 1 58 0 1 635 28 61 0 0 chrX 6613151 6613200 -15809627 + AT_rich Low_complexity Low_complexity 1 49 0 1 635 257 140 18 0 chrX 6613280 6613337 -15809490 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 635 27 62 0 0 chrX 6613412 6613460 -15809367 + AT_rich Low_complexity Low_complexity 1 48 0 1 635 294 143 0 0 chrX 6614163 6614212 -15808615 + (TATG)n Simple_repeat Simple_repeat 3 51 0 1 635 186 133 0 0 chrX 6614718 6614748 -15808079 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1 635 233 29 29 0 chrX 6620114 6620148 -15802679 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 635 192 77 0 0 chrX 6621840 6621866 -15800961 + (A)n Simple_repeat Simple_repeat 1 26 0 1 635 205 186 0 0 chrX 6624134 6624177 -15798650 + A-rich Low_complexity Low_complexity 1 43 0 1 635 263 194 31 31 chrX 6626937 6627033 -15795794 + (TA)n Simple_repeat Simple_repeat 1 96 0 1 635 450 0 0 0 chrX 6627511 6627561 -15795266 + (TCCG)n Simple_repeat Simple_repeat 4 53 0 1 635 402 108 0 0 chrX 6627723 6627797 -15795030 + (TCCA)n Simple_repeat Simple_repeat 2 75 0 1 635 29 28 0 0 chrX 6630333 6630369 -15792458 + AT_rich Low_complexity Low_complexity 1 36 0 1 635 22 56 0 0 chrX 6630722 6630758 -15792069 + AT_rich Low_complexity Low_complexity 1 36 0 1 635 192 77 0 0 chrX 6631096 6631122 -15791705 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 635 235 239 32 11 chrX 6633879 6633972 -15788855 + T-rich Low_complexity Low_complexity 6 100 0 1 635 238 196 59 0 chrX 6634172 6634223 -15788604 + (CCCCAA)n Simple_repeat Simple_repeat 5 58 0 1 635 192 40 0 0 chrX 6634413 6634438 -15788389 + (A)n Simple_repeat Simple_repeat 1 25 0 1 635 241 51 32 63 chrX 6641382 6641445 -15781382 + (CTTTG)n Simple_repeat Simple_repeat 4 64 0 1 635 28 29 0 0 chrX 6641847 6641882 -15780945 + AT_rich Low_complexity Low_complexity 1 35 0 1 635 186 103 0 0 chrX 6641996 6642025 -15780802 + (ATCG)n Simple_repeat Simple_repeat 4 32 0 1 635 195 114 0 0 chrX 6644122 6644157 -15778670 + (GGATG)n Simple_repeat Simple_repeat 3 37 0 1 635 213 175 0 0 chrX 6645159 6645199 -15777628 + (TCTG)n Simple_repeat Simple_repeat 3 42 0 1 635 348 43 0 0 chrX 6645724 6645770 -15777057 + (T)n Simple_repeat Simple_repeat 1 46 0 1 635 231 61 0 0 chrX 6646923 6646956 -15775871 + (A)n Simple_repeat Simple_repeat 1 33 0 1 635 28 0 0 0 chrX 6649497 6649525 -15773302 + AT_rich Low_complexity Low_complexity 1 28 0 1 635 408 55 18 0 chrX 6649812 6649867 -15772960 + TRANSIB4 DNA Transib 164 219 -2391 1 635 816 45 45 0 chrX 6649854 6649966 -15772861 + TRANSIB4 DNA Transib 1540 1656 -954 1 635 1086 41 221 0 chrX 6649987 6650236 -15772591 + TRANSIB4 DNA Transib 2307 2610 0 1 635 1325 33 0 0 chrX 6651323 6651473 -15771354 + PROTOP DNA P 17 166 -4314 1 635 3667 96 71 2 chrX 6651597 6652149 -15770678 + DNAREP1_DM LINE Penelope 5 594 0 1 635 263 173 38 62 chrX 6652267 6652347 -15770480 + PROTOP DNA P 3451 3528 -952 1 635 491 207 0 33 chrX 6652369 6652489 -15770338 + PROTOP DNA P 3663 3778 -702 1 635 315 318 0 0 chrX 6656084 6656169 -15766658 + (CTGGGG)n Simple_repeat Simple_repeat 1 85 0 1 635 254 295 0 0 chrX 6658339 6658417 -15764410 + GA-rich Low_complexity Low_complexity 1 78 0 1 635 29 0 0 0 chrX 6664339 6664368 -15758459 + AT_rich Low_complexity Low_complexity 1 29 0 1 635 389 85 34 0 chrX 6664615 6664674 -15758153 + FB4_DM DNA Tc1 1 61 -4028 1 635 27 29 0 0 chrX 6665157 6665191 -15757636 + AT_rich Low_complexity Low_complexity 1 34 0 1 635 219 125 0 0 chrX 6667772 6667812 -15755015 + (CGAAT)n Simple_repeat Simple_repeat 3 42 0 1 635 232 226 0 0 chrX 6668667 6668720 -15754107 + (CCG)n Simple_repeat Simple_repeat 2 54 0 1 635 183 156 0 0 chrX 6669302 6669334 -15753493 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 635 198 0 0 0 chrX 6669640 6669662 -15753165 + (CAGC)n Simple_repeat Simple_repeat 4 25 0 1 635 223 107 35 18 chrX 6671318 6671375 -15751452 + (GAGTG)n Simple_repeat Simple_repeat 5 62 0 1 635 240 35 0 0 chrX 6671892 6671921 -15750906 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 635 225 108 0 0 chrX 6672767 6672804 -15750023 + (CACTC)n Simple_repeat Simple_repeat 1 37 0 1 635 25 51 0 0 chrX 6674453 6674492 -15748335 + AT_rich Low_complexity Low_complexity 1 39 0 1 635 21 0 0 0 chrX 6674905 6674926 -15747901 + AT_rich Low_complexity Low_complexity 1 21 0 1 635 219 140 0 0 chrX 6675424 6675474 -15747353 + (T)n Simple_repeat Simple_repeat 1 50 0 1 635 195 162 0 0 chrX 6679760 6679797 -15743030 + (ATTG)n Simple_repeat Simple_repeat 2 38 0 1 635 228 35 0 0 chrX 6680555 6680584 -15742243 + (CTG)n Simple_repeat Simple_repeat 2 30 0 1 635 226 226 0 0 chrX 6682974 6683027 -15739800 - ROO_I LTR Pao -7528 728 676 1 635 227 357 9 0 chrX 6683921 6684033 -15738794 + (CTG)n Simple_repeat Simple_repeat 1 113 0 1 635 225 139 0 0 chrX 6684044 6684087 -15738740 + (ATG)n Simple_repeat Simple_repeat 1 43 0 1 635 247 145 16 16 chrX 6684270 6684333 -15738494 + ROO_I LTR Pao 668 730 -7526 1 636 180 0 0 0 chrX 6685128 6685148 -15737679 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 1 636 236 184 12 84 chrX 6685440 6685523 -15737304 + ROO_I LTR Pao 656 732 -7524 1 636 206 167 21 0 chrX 6686149 6686197 -15736630 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1 636 28 0 0 0 chrX 6689736 6689764 -15733063 + AT_rich Low_complexity Low_complexity 1 28 0 1 636 26 0 0 0 chrX 6689803 6689829 -15732998 + AT_rich Low_complexity Low_complexity 1 26 0 1 636 251 167 15 0 chrX 6690496 6690562 -15732265 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 636 231 36 0 0 chrX 6690925 6690953 -15731874 + (TAA)n Simple_repeat Simple_repeat 1 28 0 1 636 243 125 0 0 chrX 6691433 6691473 -15731354 + (CAGC)n Simple_repeat Simple_repeat 4 43 0 1 636 231 125 0 0 chrX 6694831 6694871 -15727956 + (CATAC)n Simple_repeat Simple_repeat 3 42 0 1 636 25 75 0 0 chrX 6700355 6700408 -15722419 + AT_rich Low_complexity Low_complexity 1 53 0 1 636 195 42 0 0 chrX 6700850 6700874 -15721953 + (T)n Simple_repeat Simple_repeat 1 24 0 1 636 206 219 15 30 chrX 6705953 6706019 -15716808 + T-rich Low_complexity Low_complexity 3 67 0 1 636 209 33 33 0 chrX 6707588 6707618 -15715209 + (ATG)n Simple_repeat Simple_repeat 2 32 0 1 636 28 71 0 0 chrX 6707812 6707868 -15714959 + AT_rich Low_complexity Low_complexity 1 56 0 1 636 213 39 0 0 chrX 6712923 6712949 -15709878 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 636 396 103 0 0 chrX 6713021 6713079 -15709748 + (CTG)n Simple_repeat Simple_repeat 3 60 0 1 636 216 111 0 0 chrX 6713242 6713278 -15709549 + (CTG)n Simple_repeat Simple_repeat 1 36 0 1 636 319 121 0 43 chrX 6713549 6713618 -15709209 + (CTG)n Simple_repeat Simple_repeat 3 68 0 1 636 222 128 0 0 chrX 6714364 6714403 -15708424 + (CTG)n Simple_repeat Simple_repeat 1 39 0 1 636 217 367 0 0 chrX 6718783 6718862 -15703965 + (CGG)n Simple_repeat Simple_repeat 1 79 0 1 636 354 23 0 0 chrX 6727522 6727565 -15695262 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 636 282 56 0 0 chrX 6732056 6732092 -15690735 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 636 24 0 0 0 chrX 6733273 6733297 -15689530 + AT_rich Low_complexity Low_complexity 1 24 0 1 636 202 140 0 50 chrX 6733430 6733490 -15689337 + T-rich Low_complexity Low_complexity 4 60 0 1 636 207 0 0 0 chrX 6733544 6733567 -15689260 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 636 475 292 20 35 chrX 6734946 6735262 -15687565 - XDMR_DM Unknown Unknown -43 318 8 1 636 27 0 0 0 chrX 6735382 6735409 -15687418 + AT_rich Low_complexity Low_complexity 1 27 0 1 636 183 100 0 0 chrX 6736755 6736785 -15686042 + (CTG)n Simple_repeat Simple_repeat 1 30 0 1 636 339 121 0 0 chrX 6737319 6737377 -15685450 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 636 26 0 0 0 chrX 6737875 6737901 -15684926 + AT_rich Low_complexity Low_complexity 1 26 0 1 636 28 48 0 0 chrX 6738056 6738098 -15684729 + AT_rich Low_complexity Low_complexity 1 42 0 1 636 25 0 0 0 chrX 6741985 6742010 -15680817 + AT_rich Low_complexity Low_complexity 1 25 0 1 636 241 290 0 0 chrX 6747236 6747305 -15675522 + (CATA)n Simple_repeat Simple_repeat 2 70 0 1 636 258 268 0 0 chrX 6747398 6747454 -15675373 + (CATA)n Simple_repeat Simple_repeat 3 58 0 1 636 200 195 0 0 chrX 6747630 6747671 -15675156 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 636 250 306 6 37 chrX 6747920 6748083 -15674744 + T-rich Low_complexity Low_complexity 3 160 0 1 636 206 174 22 0 chrX 6748414 6748460 -15674367 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1 636 183 184 0 0 chrX 6748589 6748627 -15674200 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 636 205 291 0 0 chrX 6749151 6749206 -15673621 + (CGG)n Simple_repeat Simple_repeat 1 55 0 1 636 275 203 0 26 chrX 6749241 6749317 -15673510 + (TTG)n Simple_repeat Simple_repeat 3 76 0 1 636 186 71 0 0 chrX 6750185 6750213 -15672614 + (T)n Simple_repeat Simple_repeat 1 28 0 1 636 42 36 0 0 chrX 6750917 6750973 -15671854 + AT_rich Low_complexity Low_complexity 1 56 0 1 636 195 220 0 0 chrX 6751268 6751318 -15671509 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 1 636 191 88 29 0 chrX 6751378 6751412 -15671415 + (CATA)n Simple_repeat Simple_repeat 4 38 0 1 636 231 253 0 37 chrX 6752549 6752631 -15670196 + (TATATG)n Simple_repeat Simple_repeat 6 84 0 1 636 186 133 0 0 chrX 6753404 6753434 -15669393 + (CATA)n Simple_repeat Simple_repeat 2 31 0 1 636 213 94 0 0 chrX 6753535 6753567 -15669260 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 636 279 93 0 0 chrX 6753677 6753720 -15669107 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1 636 239 29 0 54 chrX 6754974 6755011 -15667816 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 636 192 77 0 0 chrX 6755187 6755213 -15667614 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1 636 224 214 0 28 chrX 6755387 6755459 -15667368 + (TATG)n Simple_repeat Simple_repeat 3 72 0 1 636 237 65 0 0 chrX 6755780 6755811 -15667016 + (TTTCG)n Simple_repeat Simple_repeat 3 33 0 1 636 204 40 0 0 chrX 6756737 6756762 -15666065 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 636 226 265 15 0 chrX 6757703 6757771 -15665056 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 636 266 73 0 24 chrX 6757835 6757877 -15664950 + (CATA)n Simple_repeat Simple_repeat 3 43 0 1 636 211 186 47 0 chrX 6758473 6758516 -15664311 + (TATG)n Simple_repeat Simple_repeat 4 48 0 1 636 258 176 0 0 chrX 6759851 6759902 -15662925 + (CATA)n Simple_repeat Simple_repeat 1 51 0 1 636 225 258 0 29 chrX 6760098 6760166 -15662661 + (CATA)n Simple_repeat Simple_repeat 3 68 0 1 636 222 192 0 0 chrX 6760408 6760460 -15662367 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 636 243 0 0 0 chrX 6762978 6763005 -15659822 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 636 212 258 11 21 chrX 6764724 6764819 -15658008 + (CAG)n Simple_repeat Simple_repeat 1 94 0 1 636 210 118 0 0 chrX 6766005 6766039 -15656788 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 636 36 23 0 0 chrX 6766153 6766196 -15656631 + AT_rich Low_complexity Low_complexity 1 43 0 1 636 31 26 0 0 chrX 6767028 6767066 -15655761 + AT_rich Low_complexity Low_complexity 1 38 0 1 636 24 0 0 0 chrX 6767265 6767289 -15655538 + AT_rich Low_complexity Low_complexity 1 24 0 1 636 209 265 15 0 chrX 6768550 6768618 -15654209 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 636 21 0 0 0 chrX 6768973 6768994 -15653833 + AT_rich Low_complexity Low_complexity 1 21 0 1 636 211 167 15 15 chrX 6769066 6769133 -15653694 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 636 187 157 19 19 chrX 6769173 6769225 -15653602 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 636 183 42 0 0 chrX 6769354 6769378 -15653449 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 636 288 141 12 37 chrX 6770399 6770480 -15652347 + (CAA)n Simple_repeat Simple_repeat 1 79 0 1 636 207 69 0 0 chrX 6770543 6770572 -15652255 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1 636 351 209 0 0 chrX 6770590 6770681 -15652146 + ROO_I LTR Pao 644 734 -7522 1 636 231 189 0 0 chrX 6771167 6771220 -15651607 + (TGG)n Simple_repeat Simple_repeat 2 54 0 1 636 209 340 7 7 chrX 6772760 6772905 -15649922 + (CAA)n Simple_repeat Simple_repeat 1 145 0 1 636 220 133 22 0 chrX 6773150 6773195 -15649632 + (CAG)n Simple_repeat Simple_repeat 1 46 0 1 636 260 164 0 15 chrX 6773424 6773492 -15649335 + (CAG)n Simple_repeat Simple_repeat 3 69 0 1 636 186 43 0 0 chrX 6773653 6773676 -15649151 + (CGG)n Simple_repeat Simple_repeat 3 25 0 1 636 210 143 0 0 chrX 6773749 6773784 -15649043 + (CAG)n Simple_repeat Simple_repeat 3 37 0 1 636 185 65 32 0 chrX 6774213 6774244 -15648583 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 1 636 188 34 0 33 chrX 6774515 6774545 -15648282 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 636 451 48 440 0 chrX 6775009 6775093 -15647734 - DNAREP1_DM LINE Penelope 0 594 474 1 636 914 98 370 0 chrX 6775131 6775312 -15647515 - DNAREP1_DM LINE Penelope -346 248 1 1 636 22 56 0 0 chrX 6776575 6776611 -15646216 + AT_rich Low_complexity Low_complexity 1 36 0 1 636 225 211 26 26 chrX 6776960 6777038 -15645789 + A-rich Low_complexity Low_complexity 3 80 0 1 636 21 0 0 0 chrX 6778041 6778062 -15644765 + AT_rich Low_complexity Low_complexity 1 21 0 1 636 22 0 0 0 chrX 6778653 6778675 -15644152 + AT_rich Low_complexity Low_complexity 1 22 0 1 636 25 0 0 0 chrX 6781707 6781732 -15641095 + AT_rich Low_complexity Low_complexity 1 25 0 1 636 309 68 0 0 chrX 6781904 6781948 -15640879 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 636 321 118 0 0 chrX 6784191 6784242 -15638585 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 636 258 116 0 0 chrX 6784448 6784491 -15638336 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 636 262 213 8 107 chrX 6784814 6784935 -15637892 + ROO_I LTR Pao 651 759 -7497 1 636 375 41 0 0 chrX 6785799 6785848 -15636979 + (CAGC)n Simple_repeat Simple_repeat 3 51 0 1 636 212 204 0 22 chrX 6786046 6786118 -15636709 + (CATATA)n Simple_repeat Simple_repeat 1 70 0 1 636 201 121 0 0 chrX 6786262 6786295 -15636532 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 636 203 54 53 26 chrX 6792519 6792557 -15630270 + (CTTAA)n Simple_repeat Simple_repeat 1 39 0 1 636 225 108 0 0 chrX 6794581 6794618 -15628209 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 636 225 65 0 0 chrX 6795441 6795472 -15627355 + (T)n Simple_repeat Simple_repeat 1 31 0 1 636 207 200 0 0 chrX 6796158 6796203 -15626624 + T-rich Low_complexity Low_complexity 1 45 0 1 636 258 235 25 0 chrX 6796944 6797025 -15625802 + T-rich Low_complexity Low_complexity 2 84 0 1 636 264 59 0 0 chrX 6797151 6797185 -15625642 + (A)n Simple_repeat Simple_repeat 1 34 0 1 636 32 0 0 0 chrX 6797465 6797497 -15625330 + AT_rich Low_complexity Low_complexity 1 32 0 1 636 261 98 0 0 chrX 6798309 6798350 -15624477 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 636 231 133 0 0 chrX 6799321 6799366 -15623461 + (A)n Simple_repeat Simple_repeat 1 45 0 1 636 22 0 0 0 chrX 6799715 6799737 -15623090 + AT_rich Low_complexity Low_complexity 1 22 0 1 636 216 111 0 0 chrX 6799913 6799949 -15622878 + (ATTCG)n Simple_repeat Simple_repeat 3 38 0 1 636 32 26 0 0 chrX 6800904 6800943 -15621884 + AT_rich Low_complexity Low_complexity 1 39 0 1 636 200 237 0 17 chrX 6803309 6803369 -15619458 + T-rich Low_complexity Low_complexity 1 59 0 1 636 211 257 0 28 chrX 6803560 6803632 -15619195 + T-rich Low_complexity Low_complexity 2 71 0 1 636 28 0 0 0 chrX 6803793 6803821 -15619006 + AT_rich Low_complexity Low_complexity 1 28 0 1 636 27 0 0 0 chrX 6804716 6804743 -15618084 + AT_rich Low_complexity Low_complexity 1 27 0 1 636 22 0 0 0 chrX 6810360 6810382 -15612445 + AT_rich Low_complexity Low_complexity 1 22 0 1 636 23 33 0 0 chrX 6811089 6811119 -15611708 + AT_rich Low_complexity Low_complexity 1 30 0 1 636 242 244 0 34 chrX 6811687 6811776 -15611051 + ROO_I LTR Pao 658 743 -7513 1 636 366 146 0 64 chrX 6811784 6811894 -15610933 + ROO_I LTR Pao 638 740 -7516 1 636 258 95 0 0 chrX 6812146 6812188 -15610639 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 636 183 42 0 0 chrX 6815124 6815148 -15607679 + (A)n Simple_repeat Simple_repeat 1 24 0 1 636 22 35 0 0 chrX 6815500 6815529 -15607298 + AT_rich Low_complexity Low_complexity 1 29 0 1 637 249 33 0 0 chrX 6817923 6817953 -15604874 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 637 24 32 0 0 chrX 6818363 6818394 -15604433 + AT_rich Low_complexity Low_complexity 1 31 0 1 637 216 188 0 0 chrX 6819032 6819080 -15603747 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 637 213 132 0 0 chrX 6820264 6820302 -15602525 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 637 786 301 47 50 chrX 6820770 6821452 -15601375 + SAR_DM Satellite Satellite 207 886 -586 1 637 189 0 0 0 chrX 6822008 6822029 -15600798 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 637 23 33 0 0 chrX 6822641 6822671 -15600156 + AT_rich Low_complexity Low_complexity 1 30 0 1 637 216 214 0 18 chrX 6823081 6823138 -15599689 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 637 225 0 0 0 chrX 6823187 6823212 -15599615 + (CGAAA)n Simple_repeat Simple_repeat 1 25 0 1 637 300 137 0 0 chrX 6823301 6823352 -15599475 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 637 212 242 0 57 chrX 6825268 6825338 -15597489 + T-rich Low_complexity Low_complexity 1 66 0 1 637 228 35 0 0 chrX 6826415 6826444 -15596383 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 637 210 259 0 0 chrX 6826926 6826980 -15595847 + (TTG)n Simple_repeat Simple_repeat 2 55 0 1 637 264 59 0 0 chrX 6826993 6827027 -15595800 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 637 189 94 0 0 chrX 6827855 6827887 -15594940 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 637 207 0 0 0 chrX 6827954 6827977 -15594850 + (G)n Simple_repeat Simple_repeat 1 23 0 1 637 252 100 0 0 chrX 6828261 6828301 -15594526 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 637 198 191 0 0 chrX 6828405 6828447 -15594380 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 637 220 195 0 0 chrX 6828894 6828935 -15593892 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 637 21 0 0 0 chrX 6831100 6831121 -15591706 + GC_rich Low_complexity Low_complexity 1 21 0 1 637 198 128 0 0 chrX 6832152 6832191 -15590636 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 637 252 0 0 0 chrX 6832343 6832371 -15590456 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 637 189 0 0 0 chrX 6832893 6832914 -15589913 + (A)n Simple_repeat Simple_repeat 1 21 0 1 637 258 56 0 0 chrX 6833295 6833331 -15589496 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 637 205 175 0 0 chrX 6836620 6836660 -15586167 + (CTCA)n Simple_repeat Simple_repeat 1 40 0 1 637 21 0 0 0 chrX 6838034 6838055 -15584772 + AT_rich Low_complexity Low_complexity 1 21 0 1 637 210 91 0 0 chrX 6838985 6839018 -15583809 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 637 22 0 0 0 chrX 6839100 6839122 -15583705 + AT_rich Low_complexity Low_complexity 1 22 0 1 637 201 132 0 0 chrX 6843410 6843448 -15579379 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 637 189 154 0 0 chrX 6843601 6843640 -15579187 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 637 228 153 65 86 chrX 6845342 6845435 -15577392 - RSP Satellite Satellite -7 111 21 1 637 228 153 65 86 chrX 6845497 6845590 -15577237 - RSP Satellite Satellite -7 111 21 1 637 228 153 65 86 chrX 6845652 6845745 -15577082 - RSP Satellite Satellite -7 111 21 1 637 228 153 65 86 chrX 6845807 6845900 -15576927 - RSP Satellite Satellite -7 111 21 1 637 1150 33 32 44 chrX 6846148 6846306 -15576521 - G5A_DM LINE Jockey -24 2817 2662 1 637 1055 292 56 60 chrX 6847116 6851344 -15571483 - SAR_DM Satellite Satellite -948 4213 1 1 637 25 0 0 0 chrX 6851608 6851633 -15571194 + AT_rich Low_complexity Low_complexity 1 25 0 1 637 22 0 0 0 chrX 6853328 6853350 -15569477 + AT_rich Low_complexity Low_complexity 1 22 0 1 637 200 273 0 0 chrX 6857052 6857107 -15565720 + (CCA)n Simple_repeat Simple_repeat 2 56 0 1 637 192 40 0 0 chrX 6857786 6857811 -15565016 + (CCA)n Simple_repeat Simple_repeat 2 26 0 1 637 224 262 0 15 chrX 6858318 6858384 -15564443 + G-rich Low_complexity Low_complexity 5 69 0 1 637 205 196 20 0 chrX 6859897 6859948 -15562879 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 637 222 91 0 0 chrX 6860792 6860825 -15562002 + (CAA)n Simple_repeat Simple_repeat 3 35 0 1 637 309 82 0 0 chrX 6860981 6861030 -15561797 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 637 220 195 0 0 chrX 6862640 6862681 -15560146 + GA-rich Low_complexity Low_complexity 1 41 0 1 637 36 0 0 0 chrX 6863075 6863111 -15559716 + AT_rich Low_complexity Low_complexity 1 36 0 1 637 24 0 0 0 chrX 6867373 6867397 -15555430 + AT_rich Low_complexity Low_complexity 1 24 0 1 637 23 54 0 0 chrX 6867667 6867704 -15555123 + AT_rich Low_complexity Low_complexity 1 37 0 1 637 27 0 0 0 chrX 6868099 6868126 -15554701 + AT_rich Low_complexity Low_complexity 1 27 0 1 637 27 49 0 0 chrX 6873010 6873051 -15549776 + AT_rich Low_complexity Low_complexity 1 41 0 1 637 231 125 0 0 chrX 6873957 6873997 -15548830 + (GTATG)n Simple_repeat Simple_repeat 4 43 0 1 637 210 120 57 57 chrX 6875749 6875802 -15547025 + (CATTC)n Simple_repeat Simple_repeat 5 57 0 1 637 220 259 0 0 chrX 6875930 6875988 -15546839 + CT-rich Low_complexity Low_complexity 1 58 0 1 637 231 157 0 0 chrX 6876851 6876902 -15545925 + (CAGT)n Simple_repeat Simple_repeat 4 54 0 1 637 210 162 27 0 chrX 6877986 6878023 -15544804 + GA-rich Low_complexity Low_complexity 2 39 0 1 637 35 63 0 0 chrX 6878150 6878213 -15544614 + AT_rich Low_complexity Low_complexity 1 63 0 1 637 26 30 0 0 chrX 6878598 6878631 -15544196 + AT_rich Low_complexity Low_complexity 1 33 0 1 637 201 176 0 56 chrX 6881180 6881234 -15541593 + A-rich Low_complexity Low_complexity 2 52 0 1 637 219 219 0 0 chrX 6881917 6881958 -15540869 + (CGGA)n Simple_repeat Simple_repeat 3 43 0 1 637 27 0 0 0 chrX 6882580 6882607 -15540220 + AT_rich Low_complexity Low_complexity 1 27 0 1 637 261 0 0 0 chrX 6883086 6883115 -15539712 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 637 33 56 0 0 chrX 6885647 6885701 -15537126 + AT_rich Low_complexity Low_complexity 1 54 0 1 637 205 292 14 0 chrX 6889519 6889591 -15533236 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 637 216 236 14 14 chrX 6897346 6897419 -15525408 + (TA)n Simple_repeat Simple_repeat 1 73 0 1 637 233 224 0 0 chrX 6897507 6897565 -15525262 + A-rich Low_complexity Low_complexity 1 58 0 1 637 360 147 0 0 chrX 6897776 6897851 -15524976 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 637 24 0 0 0 chrX 6899765 6899789 -15523038 + AT_rich Low_complexity Low_complexity 1 24 0 1 637 189 0 0 0 chrX 6902568 6902589 -15520238 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 637 188 86 0 28 chrX 6903216 6903252 -15519575 + (CATGC)n Simple_repeat Simple_repeat 3 37 0 1 637 21 0 0 0 chrX 6903729 6903750 -15519077 + AT_rich Low_complexity Low_complexity 1 21 0 1 637 24 53 0 0 chrX 6908808 6908846 -15513981 + AT_rich Low_complexity Low_complexity 1 38 0 1 637 695 151 281 4 chrX 6908846 6909109 -15513718 + DNAREP1_DM LINE Penelope 2 337 -257 1 637 988 80 101 0 chrX 6909093 6909231 -15513596 + DNAREP1_DM LINE Penelope 441 592 -2 1 637 955 302 56 55 chrX 6911117 6913091 -15509736 + SAR_DM Satellite Satellite 1 1974 -292 1 637 242 116 23 0 chrX 6915570 6915613 -15507214 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 637 237 65 0 0 chrX 6916545 6916576 -15506251 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 1 637 4699 0 2 0 chrX 6917688 6918193 -15504634 + TABOR_LTR LTR Gypsy 1 506 0 1 637 56692 2 3 1 chrX 6918193 6924517 -15498310 + TABOR_I LTR Gypsy 1 6336 0 1 637 4737 0 0 0 chrX 6924515 6925021 -15497806 + TABOR_LTR LTR Gypsy 1 506 0 1 637 183 42 0 0 chrX 6930723 6930747 -15492080 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 637 22 0 0 0 chrX 6932551 6932573 -15490254 + AT_rich Low_complexity Low_complexity 1 22 0 1 637 23 0 0 0 chrX 6932947 6932970 -15489857 + AT_rich Low_complexity Low_complexity 1 23 0 1 637 265 159 16 16 chrX 6934829 6934893 -15487934 + (CAG)n Simple_repeat Simple_repeat 1 64 0 1 637 28 61 0 0 chrX 6935914 6935963 -15486864 + AT_rich Low_complexity Low_complexity 1 49 0 1 637 24 53 0 0 chrX 6936134 6936172 -15486655 + AT_rich Low_complexity Low_complexity 1 38 0 1 637 295 229 61 15 chrX 6936183 6936347 -15486480 + XDMR_DM Unknown Unknown 1 169 -192 1 637 234 62 0 0 chrX 6937155 6937187 -15485640 + (CAAT)n Simple_repeat Simple_repeat 1 32 0 1 637 312 27 0 0 chrX 6939009 6939046 -15483781 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 637 192 77 0 0 chrX 6939165 6939191 -15483636 + (CAGC)n Simple_repeat Simple_repeat 3 28 0 1 637 221 245 0 0 chrX 6942606 6942659 -15480168 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 637 24 0 0 0 chrX 6943557 6943581 -15479246 + AT_rich Low_complexity Low_complexity 1 24 0 1 637 22 0 0 0 chrX 6946469 6946491 -15476336 + AT_rich Low_complexity Low_complexity 1 22 0 1 638 231 265 0 0 chrX 6947457 6947525 -15475302 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 638 21 0 0 0 chrX 6948075 6948096 -15474731 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 23 0 0 0 chrX 6948616 6948639 -15474188 + AT_rich Low_complexity Low_complexity 1 23 0 1 638 22 56 0 0 chrX 6954177 6954213 -15468614 + AT_rich Low_complexity Low_complexity 1 36 0 1 638 288 77 0 0 chrX 6954549 6954588 -15468239 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1 638 23 33 0 0 chrX 6958486 6958516 -15464311 + AT_rich Low_complexity Low_complexity 1 30 0 1 638 27 0 0 0 chrX 6960390 6960417 -15462410 + AT_rich Low_complexity Low_complexity 1 27 0 1 638 22 0 0 0 chrX 6961455 6961477 -15461350 + AT_rich Low_complexity Low_complexity 1 22 0 1 638 195 42 0 0 chrX 6961540 6961564 -15461263 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 638 27 49 0 0 chrX 6962716 6962757 -15460070 + AT_rich Low_complexity Low_complexity 1 41 0 1 638 25 0 0 0 chrX 6963373 6963398 -15459429 + AT_rich Low_complexity Low_complexity 1 25 0 1 638 24 0 0 0 chrX 6966660 6966684 -15456143 + AT_rich Low_complexity Low_complexity 1 24 0 1 638 342 229 140 17 chrX 6968144 6968322 -15454505 + SAR_DM Satellite Satellite 1046 1245 -227 1 638 209 83 28 0 chrX 6968883 6968919 -15453908 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 638 23 54 0 0 chrX 6969379 6969416 -15453411 + AT_rich Low_complexity Low_complexity 1 37 0 1 638 207 157 19 19 chrX 6969656 6969708 -15453119 + (TTTG)n Simple_repeat Simple_repeat 4 55 0 1 638 23 0 0 0 chrX 6970191 6970214 -15452613 + AT_rich Low_complexity Low_complexity 1 23 0 1 638 23 0 0 0 chrX 6970825 6970848 -15451979 + AT_rich Low_complexity Low_complexity 1 23 0 1 638 28 29 0 0 chrX 6971591 6971626 -15451201 + AT_rich Low_complexity Low_complexity 1 35 0 1 638 287 121 0 17 chrX 6971921 6971980 -15450847 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 638 203 310 20 0 chrX 6972309 6972409 -15450418 + (CTG)n Simple_repeat Simple_repeat 3 104 0 1 638 210 300 0 52 chrX 6972549 6972665 -15450162 + (CTG)n Simple_repeat Simple_repeat 3 112 0 1 638 235 352 0 20 chrX 6973178 6973326 -15449501 + (TTG)n Simple_repeat Simple_repeat 1 145 0 1 638 29 0 0 0 chrX 6974677 6974706 -15448121 + AT_rich Low_complexity Low_complexity 1 29 0 1 638 191 36 36 0 chrX 6974778 6974806 -15448021 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 638 21 36 0 0 chrX 6974982 6975010 -15447817 + AT_rich Low_complexity Low_complexity 1 28 0 1 638 29 0 0 0 chrX 6976024 6976053 -15446774 + AT_rich Low_complexity Low_complexity 1 29 0 1 638 258 56 0 0 chrX 6976740 6976776 -15446051 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 638 21 0 0 0 chrX 6977079 6977100 -15445727 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 21 0 0 0 chrX 6977169 6977190 -15445637 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 29 101 0 0 chrX 6978108 6978207 -15444620 + AT_rich Low_complexity Low_complexity 1 99 0 1 638 229 139 13 77 chrX 6978316 6978394 -15444433 + (TTG)n Simple_repeat Simple_repeat 2 74 0 1 638 21 0 0 0 chrX 6980827 6980848 -15441979 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 22 0 0 0 chrX 6982255 6982277 -15440550 + AT_rich Low_complexity Low_complexity 1 22 0 1 638 264 77 0 0 chrX 6984419 6984458 -15438369 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 638 201 262 0 16 chrX 6985043 6985105 -15437722 + (TTG)n Simple_repeat Simple_repeat 3 63 0 1 638 180 111 0 0 chrX 6989625 6989652 -15433175 + (TATG)n Simple_repeat Simple_repeat 1 27 0 1 638 219 167 0 0 chrX 6991795 6991837 -15430990 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 638 30 27 0 0 chrX 6992431 6992468 -15430359 + AT_rich Low_complexity Low_complexity 1 37 0 1 638 234 229 14 28 chrX 6997432 6997504 -15425323 + (CTG)n Simple_repeat Simple_repeat 1 71 0 1 638 45 19 0 0 chrX 6998652 6998704 -15424123 + AT_rich Low_complexity Low_complexity 1 52 0 1 638 37 0 0 0 chrX 6998726 6998763 -15424064 + AT_rich Low_complexity Low_complexity 1 37 0 1 638 220 256 0 0 chrX 7000041 7000084 -15422743 + (CAG)n Simple_repeat Simple_repeat 1 43 0 1 638 192 40 0 0 chrX 7000376 7000401 -15422426 + (CAATA)n Simple_repeat Simple_repeat 3 27 0 1 638 283 250 11 11 chrX 7001531 7001620 -15421207 + (ATGGTG)n Simple_repeat Simple_repeat 1 89 0 1 638 29 28 0 0 chrX 7004808 7004844 -15417983 + AT_rich Low_complexity Low_complexity 1 36 0 1 638 258 95 0 0 chrX 7005172 7005214 -15417613 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 638 237 65 0 0 chrX 7005268 7005299 -15417528 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1 638 213 255 0 0 chrX 7005678 7005725 -15417102 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 638 206 226 19 19 chrX 7006805 7006859 -15415968 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 638 192 40 0 0 chrX 7007082 7007107 -15415720 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1 638 23 33 0 0 chrX 7007953 7007983 -15414844 + AT_rich Low_complexity Low_complexity 1 30 0 1 638 222 118 0 0 chrX 7009408 7009442 -15413385 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 638 180 0 0 0 chrX 7009583 7009603 -15413224 + (T)n Simple_repeat Simple_repeat 1 20 0 1 638 26 0 0 0 chrX 7010031 7010057 -15412770 + AT_rich Low_complexity Low_complexity 1 26 0 1 638 990 302 46 53 chrX 7010123 7011223 -15411604 + SAR_DM Satellite Satellite 1 1092 -400 1 638 704 244 48 32 chrX 7010950 7011263 -15411564 - XDMR Unknown Unknown -6 355 38 1 638 224 161 16 0 chrX 7011780 7011842 -15410985 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 638 251 170 36 36 chrX 7012747 7012802 -15410025 - Transib-N1_DM DNA Transib -459 55 1 1 638 236 203 76 30 chrX 7012869 7012935 -15409892 - DM1731_LTR LTR Copia -218 118 50 1 638 203 250 0 37 chrX 7014100 7014154 -15408673 + (CATA)n Simple_repeat Simple_repeat 4 55 0 1 638 204 40 0 0 chrX 7015796 7015821 -15407006 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 638 22 56 0 0 chrX 7015984 7016020 -15406807 + AT_rich Low_complexity Low_complexity 1 36 0 1 638 240 35 0 0 chrX 7016707 7016736 -15406091 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 638 222 136 23 0 chrX 7017297 7017341 -15405486 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 1 638 234 174 0 0 chrX 7018020 7018066 -15404761 + (CAT)n Simple_repeat Simple_repeat 1 46 0 1 638 39 0 0 52 chrX 7018269 7018327 -15404500 + AT_rich Low_complexity Low_complexity 1 55 0 1 638 234 62 0 0 chrX 7018695 7018727 -15404100 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 638 219 36 0 0 chrX 7018886 7018914 -15403913 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 638 186 240 0 0 chrX 7019089 7019139 -15403688 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 638 3962 7 0 0 chrX 7019333 7019761 -15403066 + ROO_LTR LTR Pao 1 428 0 1 638 74835 1 3 2 chrX 7019761 7028006 -15394821 + ROO_I LTR Pao 1 8256 0 1 638 3996 2 0 0 chrX 7028006 7028434 -15394393 + ROO_LTR LTR Pao 1 428 0 1 638 204 235 0 0 chrX 7028734 7028802 -15394025 + T-rich Low_complexity Low_complexity 1 68 0 1 638 234 0 0 0 chrX 7029317 7029343 -15393484 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 638 240 35 0 0 chrX 7030846 7030875 -15391952 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 638 26 0 0 0 chrX 7031500 7031526 -15391301 + AT_rich Low_complexity Low_complexity 1 26 0 1 638 215 178 22 0 chrX 7035360 7035405 -15387422 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 638 402 100 0 0 chrX 7038784 7038844 -15383983 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 638 402 265 123 77 chrX 7039301 7039811 -15383016 - SAR_DM Satellite Satellite -603 869 336 1 638 21 0 0 0 chrX 7044239 7044260 -15378567 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 372 71 0 0 chrX 7045477 7045533 -15377294 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 638 232 250 0 0 chrX 7045617 7045669 -15377158 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 638 201 147 0 0 chrX 7046051 7046085 -15376742 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 638 201 175 0 0 chrX 7046876 7046916 -15375911 + (CATA)n Simple_repeat Simple_repeat 4 43 0 1 638 264 30 0 0 chrX 7048108 7048141 -15374686 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 638 210 174 0 21 chrX 7048319 7048366 -15374461 + CT-rich Low_complexity Low_complexity 1 46 0 1 638 201 39 0 0 chrX 7048460 7048486 -15374341 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 638 198 0 0 0 chrX 7048654 7048676 -15374151 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 638 360 0 0 0 chrX 7050127 7050167 -15372660 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 638 180 0 0 0 chrX 7050707 7050727 -15372100 + (T)n Simple_repeat Simple_repeat 1 20 0 1 638 180 0 0 0 chrX 7051850 7051870 -15370957 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 638 180 111 0 0 chrX 7053288 7053315 -15369512 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 638 186 103 0 0 chrX 7053810 7053839 -15368988 + (TGGG)n Simple_repeat Simple_repeat 2 30 0 1 638 225 182 0 0 chrX 7054486 7054541 -15368286 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 638 186 156 0 0 chrX 7056022 7056067 -15366760 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 638 210 260 0 0 chrX 7060762 7060835 -15361992 + (CGG)n Simple_repeat Simple_repeat 2 74 0 1 638 30 45 0 0 chrX 7061403 7061447 -15361380 + AT_rich Low_complexity Low_complexity 1 44 0 1 638 217 241 0 0 chrX 7061888 7061946 -15360881 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 1 638 22 0 0 0 chrX 7062130 7062152 -15360675 + AT_rich Low_complexity Low_complexity 1 22 0 1 638 186 43 0 0 chrX 7062419 7062442 -15360385 + (CGATA)n Simple_repeat Simple_repeat 2 24 0 1 638 303 85 0 0 chrX 7066733 7066780 -15356047 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 1 638 225 65 0 0 chrX 7066964 7066995 -15355832 + (A)n Simple_repeat Simple_repeat 1 31 0 1 638 204 125 0 0 chrX 7067699 7067731 -15355096 + (CACCAT)n Simple_repeat Simple_repeat 1 32 0 1 638 180 0 0 0 chrX 7069526 7069546 -15353281 + (T)n Simple_repeat Simple_repeat 1 20 0 1 638 215 174 22 0 chrX 7071763 7071809 -15351018 + T-rich Low_complexity Low_complexity 2 48 0 1 638 25 0 0 0 chrX 7074612 7074637 -15348190 + AT_rich Low_complexity Low_complexity 1 25 0 1 638 208 244 0 0 chrX 7075200 7075245 -15347582 + (CATA)n Simple_repeat Simple_repeat 3 47 0 1 638 207 0 0 0 chrX 7076040 7076063 -15346764 + (CAT)n Simple_repeat Simple_repeat 1 23 0 1 638 207 176 0 0 chrX 7076478 7076512 -15346315 + (TGG)n Simple_repeat Simple_repeat 2 35 0 1 638 222 176 0 0 chrX 7076726 7076777 -15346050 + (CCA)n Simple_repeat Simple_repeat 3 53 0 1 639 225 191 0 0 chrX 7078141 7078188 -15344639 + A-rich Low_complexity Low_complexity 1 47 0 1 639 206 32 32 0 chrX 7080160 7080191 -15342636 + (GCTTG)n Simple_repeat Simple_repeat 1 32 0 1 639 189 107 0 0 chrX 7080892 7080920 -15341907 + (TCG)n Simple_repeat Simple_repeat 3 30 0 1 639 273 151 0 0 chrX 7081054 7081107 -15341720 + A-rich Low_complexity Low_complexity 1 53 0 1 639 459 204 103 26 chrX 7081674 7081830 -15340997 + SAR_DM Satellite Satellite 598 765 -707 1 639 398 289 70 40 chrX 7081799 7082098 -15340729 - XDMR_DM Unknown Unknown -47 313 6 1 639 356 271 68 40 chrX 7082113 7082290 -15340537 - XDMR Unknown Unknown -1 359 178 1 639 201 74 0 0 chrX 7083439 7083466 -15339361 + (CCGAA)n Simple_repeat Simple_repeat 4 30 0 1 639 183 42 0 0 chrX 7084095 7084119 -15338708 + (A)n Simple_repeat Simple_repeat 1 24 0 1 639 210 37 0 0 chrX 7085717 7085744 -15337083 + (TTC)n Simple_repeat Simple_repeat 2 28 0 1 639 204 67 0 0 chrX 7086095 7086125 -15336702 + (A)n Simple_repeat Simple_repeat 1 30 0 1 639 259 214 14 14 chrX 7086970 7087041 -15335786 + T-rich Low_complexity Low_complexity 3 73 0 1 639 206 324 0 0 chrX 7088257 7088325 -15334502 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 639 32 0 0 0 chrX 7088501 7088533 -15334294 + AT_rich Low_complexity Low_complexity 1 32 0 1 639 211 236 0 18 chrX 7088681 7088737 -15334090 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 639 198 0 0 0 chrX 7092048 7092070 -15330757 + (T)n Simple_repeat Simple_repeat 1 22 0 1 639 207 0 0 0 chrX 7092489 7092512 -15330315 + (T)n Simple_repeat Simple_repeat 1 23 0 1 639 189 121 0 0 chrX 7095399 7095432 -15327395 + (T)n Simple_repeat Simple_repeat 1 33 0 1 639 244 229 16 0 chrX 7095580 7095641 -15327186 + T-rich Low_complexity Low_complexity 3 64 0 1 639 189 74 0 0 chrX 7097025 7097052 -15325775 + (TGGA)n Simple_repeat Simple_repeat 3 29 0 1 639 222 231 0 19 chrX 7099833 7099886 -15322941 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 639 189 0 0 0 chrX 7101575 7101596 -15321231 + (ACTCG)n Simple_repeat Simple_repeat 2 22 0 1 639 182 0 0 97 chrX 7103128 7103138 -15319689 + (TGAA)n Simple_repeat Simple_repeat 3 12 0 1 639 279 71 0 0 chrX 7103138 7103180 -15319647 + (GCTG)n Simple_repeat Simple_repeat 1 42 0 1 639 182 0 0 97 chrX 7103180 7103200 -15319627 + (TGAA)n Simple_repeat Simple_repeat 1 18 0 1 639 216 200 0 0 chrX 7103398 7103443 -15319384 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 639 303 28 0 0 chrX 7103467 7103503 -15319324 + (T)n Simple_repeat Simple_repeat 1 36 0 1 639 193 151 0 36 chrX 7103763 7103818 -15319009 + (CAAAC)n Simple_repeat Simple_repeat 5 57 0 1 639 213 94 0 0 chrX 7103845 7103877 -15318950 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 1 639 231 88 0 0 chrX 7104811 7104845 -15317982 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 1 639 275 26 0 49 chrX 7106575 7106616 -15316211 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1 639 825 296 57 45 chrX 7106821 7107507 -15315320 - SAR_DM Satellite Satellite -581 891 198 1 639 251 240 9 83 chrX 7107861 7107970 -15314857 + ROO_I LTR Pao 643 743 -7513 1 639 220 308 0 0 chrX 7108094 7108159 -15314668 + (TCCG)n Simple_repeat Simple_repeat 4 68 0 1 639 225 0 0 0 chrX 7108740 7108765 -15314062 + (A)n Simple_repeat Simple_repeat 1 25 0 1 639 306 106 0 0 chrX 7108849 7108896 -15313931 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 639 219 196 0 19 chrX 7109527 7109579 -15313248 + A-rich Low_complexity Low_complexity 1 51 0 1 639 360 162 14 0 chrX 7110064 7110138 -15312689 - ROO_I LTR Pao -7530 726 652 1 639 239 268 14 0 chrX 7110445 7110516 -15312311 + (TTG)n Simple_repeat Simple_repeat 1 72 0 1 639 198 0 0 0 chrX 7110654 7110676 -15312151 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1 639 181 139 47 0 chrX 7110994 7111037 -15311790 + (CTG)n Simple_repeat Simple_repeat 3 47 0 1 639 207 170 0 0 chrX 7111079 7111126 -15311701 + (GCTG)n Simple_repeat Simple_repeat 4 50 0 1 639 180 0 0 0 chrX 7113517 7113537 -15309290 + (GAA)n Simple_repeat Simple_repeat 1 20 0 1 639 26 0 0 0 chrX 7114400 7114426 -15308401 + AT_rich Low_complexity Low_complexity 1 26 0 1 639 276 137 0 0 chrX 7116536 7116587 -15306240 + (TCC)n Simple_repeat Simple_repeat 1 51 0 1 639 255 79 0 0 chrX 7116781 7116819 -15306008 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 639 189 0 0 0 chrX 7117092 7117113 -15305714 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 639 312 27 0 0 chrX 7119117 7119154 -15303673 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 639 24 0 0 0 chrX 7122546 7122570 -15300257 + AT_rich Low_complexity Low_complexity 1 24 0 1 639 195 114 0 0 chrX 7122979 7123014 -15299813 + (A)n Simple_repeat Simple_repeat 1 35 0 1 639 273 119 0 0 chrX 7125985 7126027 -15296800 + (CCA)n Simple_repeat Simple_repeat 1 42 0 1 639 287 150 0 16 chrX 7126657 7126718 -15296109 + (CAG)n Simple_repeat Simple_repeat 1 60 0 1 639 21 36 0 0 chrX 7128066 7128094 -15294733 + AT_rich Low_complexity Low_complexity 1 28 0 1 639 234 156 0 0 chrX 7128561 7128606 -15294221 + T-rich Low_complexity Low_complexity 1 45 0 1 639 246 213 0 0 chrX 7128987 7129034 -15293793 + GA-rich Low_complexity Low_complexity 4 50 0 1 639 209 125 25 0 chrX 7129621 7129661 -15293166 + (TATAA)n Simple_repeat Simple_repeat 2 42 0 1 639 192 40 0 0 chrX 7130473 7130498 -15292329 + (A)n Simple_repeat Simple_repeat 1 25 0 1 639 226 184 0 162 chrX 7131427 7131544 -15291283 + ROO_I LTR Pao 639 736 -7520 1 639 276 174 17 42 chrX 7131946 7132066 -15290761 + (CAG)n Simple_repeat Simple_repeat 1 117 0 1 639 180 163 0 0 chrX 7133979 7134022 -15288805 + (CAG)n Simple_repeat Simple_repeat 3 45 0 1 639 21 36 0 0 chrX 7134291 7134319 -15288508 + AT_rich Low_complexity Low_complexity 1 28 0 1 639 24 96 0 0 chrX 7134787 7134860 -15287967 + AT_rich Low_complexity Low_complexity 1 73 0 1 639 24 0 0 0 chrX 7135915 7135939 -15286888 + AT_rich Low_complexity Low_complexity 1 24 0 1 639 669 317 78 54 chrX 7136923 7137740 -15285087 - SAR_DM Satellite Satellite -758 836 1 1 639 303 71 0 0 chrX 7138794 7138836 -15283991 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 639 209 119 24 0 chrX 7140014 7140056 -15282771 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 639 395 76 0 43 chrX 7141043 7141112 -15281715 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 639 21 36 0 0 chrX 7141186 7141214 -15281613 + AT_rich Low_complexity Low_complexity 1 28 0 1 639 24 32 0 0 chrX 7141589 7141620 -15281207 + AT_rich Low_complexity Low_complexity 1 31 0 1 639 248 233 14 0 chrX 7142458 7142531 -15280296 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 639 303 136 0 0 chrX 7143152 7143211 -15279616 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 639 25 0 0 0 chrX 7143471 7143496 -15279331 + AT_rich Low_complexity Low_complexity 1 25 0 1 639 204 40 0 0 chrX 7145743 7145768 -15277059 + (TATG)n Simple_repeat Simple_repeat 3 27 0 1 639 28 48 0 0 chrX 7146965 7147007 -15275820 + AT_rich Low_complexity Low_complexity 1 42 0 1 639 180 111 0 0 chrX 7149763 7149790 -15273037 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 1 639 321 68 0 0 chrX 7150915 7150959 -15271868 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 639 234 191 0 21 chrX 7153975 7154023 -15268804 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 639 24 0 0 0 chrX 7155867 7155891 -15266936 + AT_rich Low_complexity Low_complexity 1 24 0 1 639 183 186 0 0 chrX 7156736 7156779 -15266048 + CT-rich Low_complexity Low_complexity 4 46 0 1 639 198 0 0 0 chrX 7157646 7157668 -15265159 + (GA)n Simple_repeat Simple_repeat 2 23 0 1 639 28 0 0 0 chrX 7158221 7158249 -15264578 + AT_rich Low_complexity Low_complexity 1 28 0 1 639 228 35 0 0 chrX 7159662 7159691 -15263136 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 639 231 36 0 0 chrX 7162641 7162669 -15260158 + (A)n Simple_repeat Simple_repeat 1 28 0 1 639 236 229 0 32 chrX 7164032 7164095 -15258732 + (TATATG)n Simple_repeat Simple_repeat 3 63 0 1 639 207 0 0 0 chrX 7165307 7165330 -15257497 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 639 270 136 0 0 chrX 7165586 7165630 -15257197 + (CGTG)n Simple_repeat Simple_repeat 3 46 0 1 639 23 0 0 0 chrX 7165783 7165806 -15257021 + AT_rich Low_complexity Low_complexity 1 23 0 1 639 192 125 0 0 chrX 7166332 7166364 -15256463 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 639 204 240 0 0 chrX 7169761 7169811 -15253016 + A-rich Low_complexity Low_complexity 1 50 0 1 639 246 32 0 0 chrX 7169906 7169937 -15252890 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 639 210 291 0 0 chrX 7171126 7171181 -15251646 + (TCTG)n Simple_repeat Simple_repeat 4 58 0 1 639 21 0 0 0 chrX 7171750 7171771 -15251056 + AT_rich Low_complexity Low_complexity 1 21 0 1 639 22 35 0 0 chrX 7172603 7172632 -15250195 + AT_rich Low_complexity Low_complexity 1 29 0 1 639 211 196 39 0 chrX 7173151 7173202 -15249625 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 639 22 0 0 0 chrX 7174032 7174054 -15248773 + AT_rich Low_complexity Low_complexity 1 22 0 1 639 272 267 0 28 chrX 7175559 7175667 -15247160 + CT-rich Low_complexity Low_complexity 1 105 0 1 639 243 288 0 0 chrX 7177643 7177709 -15245118 + (TCG)n Simple_repeat Simple_repeat 2 67 0 1 639 206 231 0 0 chrX 7178459 7178498 -15244329 + (CTG)n Simple_repeat Simple_repeat 2 40 0 1 639 211 217 0 0 chrX 7179607 7179653 -15243174 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 639 225 0 0 0 chrX 7179837 7179862 -15242965 + (T)n Simple_repeat Simple_repeat 1 25 0 1 639 21 0 0 0 chrX 7182276 7182297 -15240530 + AT_rich Low_complexity Low_complexity 1 21 0 1 639 209 236 56 0 chrX 7182680 7182752 -15240075 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 639 218 146 0 40 chrX 7184892 7184942 -15237885 + (CAA)n Simple_repeat Simple_repeat 1 48 0 1 639 261 83 0 0 chrX 7184964 7185000 -15237827 + (CAA)n Simple_repeat Simple_repeat 1 36 0 1 639 220 260 0 0 chrX 7185086 7185136 -15237691 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 639 189 132 0 0 chrX 7186404 7186442 -15236385 + (T)n Simple_repeat Simple_repeat 1 38 0 1 639 215 114 23 0 chrX 7187489 7187533 -15235294 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 639 259 96 0 37 chrX 7188063 7188117 -15234710 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 639 306 115 0 0 chrX 7190214 7190266 -15232561 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 1 639 192 40 0 0 chrX 7190538 7190563 -15232264 + (T)n Simple_repeat Simple_repeat 1 25 0 1 639 465 19 0 0 chrX 7192279 7192333 -15230494 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 639 252 143 0 0 chrX 7192529 7192571 -15230256 + (CATA)n Simple_repeat Simple_repeat 1 42 0 1 639 204 40 0 0 chrX 7193172 7193197 -15229630 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 639 192 77 0 0 chrX 7193838 7193864 -15228963 + (CTCG)n Simple_repeat Simple_repeat 2 27 0 1 639 205 324 0 0 chrX 7194521 7194589 -15228238 + CT-rich Low_complexity Low_complexity 2 69 0 1 639 212 207 0 65 chrX 7195038 7195100 -15227727 + GA-rich Low_complexity Low_complexity 2 59 0 1 639 237 288 14 0 chrX 7196111 7196184 -15226643 + GA-rich Low_complexity Low_complexity 2 75 0 1 639 237 33 0 0 chrX 7196260 7196290 -15226537 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 639 195 184 0 0 chrX 7196677 7196715 -15226112 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 639 222 128 0 0 chrX 7198124 7198163 -15224664 + (CATA)n Simple_repeat Simple_repeat 3 41 0 1 639 25 51 0 0 chrX 7199465 7199504 -15223323 + AT_rich Low_complexity Low_complexity 1 39 0 1 639 35 0 0 0 chrX 7201364 7201399 -15221428 + AT_rich Low_complexity Low_complexity 1 35 0 1 639 231 211 0 0 chrX 7201729 7201781 -15221046 + CT-rich Low_complexity Low_complexity 2 53 0 1 639 399 89 0 0 chrX 7202808 7202864 -15219963 + (CAG)n Simple_repeat Simple_repeat 1 56 0 1 639 360 64 0 0 chrX 7203024 7203071 -15219756 + (CAG)n Simple_repeat Simple_repeat 3 49 0 1 639 335 202 0 0 chrX 7203177 7203261 -15219566 + ROO_I LTR Pao 641 724 -7532 1 639 346 178 22 22 chrX 7203397 7203489 -15219338 + ROO_I LTR Pao 640 731 -7525 1 639 201 74 0 0 chrX 7203922 7203949 -15218878 + (CAT)n Simple_repeat Simple_repeat 2 28 0 1 639 278 115 49 0 chrX 7204452 7204513 -15218314 + ROO_I LTR Pao 659 722 -7534 1 639 328 20 41 0 chrX 7204622 7204671 -15218156 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 639 21 89 0 0 chrX 7205344 7205400 -15217427 + AT_rich Low_complexity Low_complexity 1 56 0 1 639 213 235 15 0 chrX 7205460 7205528 -15217299 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 639 224 30 0 29 chrX 7205991 7206025 -15216802 + (CAGT)n Simple_repeat Simple_repeat 3 35 0 1 639 207 125 0 0 chrX 7206382 7206422 -15216405 + (TATCG)n Simple_repeat Simple_repeat 1 40 0 1 639 180 0 0 0 chrX 7207446 7207466 -15215361 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 639 26 30 0 0 chrX 7208332 7208365 -15214462 + AT_rich Low_complexity Low_complexity 1 33 0 1 639 23 33 0 0 chrX 7208480 7208510 -15214317 + AT_rich Low_complexity Low_complexity 1 30 0 1 640 26 0 0 0 chrX 7209423 7209449 -15213378 + AT_rich Low_complexity Low_complexity 1 26 0 1 640 210 250 0 0 chrX 7210209 7210281 -15212546 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 640 183 129 0 0 chrX 7211353 7211384 -15211443 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1 640 234 0 0 0 chrX 7212234 7212260 -15210567 + (T)n Simple_repeat Simple_repeat 1 26 0 1 640 238 300 0 12 chrX 7212615 7212696 -15210131 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 640 207 146 0 0 chrX 7213709 7213750 -15209077 + (T)n Simple_repeat Simple_repeat 1 41 0 1 640 227 93 0 23 chrX 7215047 7215091 -15207736 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 640 186 43 0 0 chrX 7216110 7216133 -15206694 + (CTCGG)n Simple_repeat Simple_repeat 2 24 0 1 640 31 68 0 0 chrX 7217977 7218036 -15204791 + AT_rich Low_complexity Low_complexity 1 59 0 1 640 26 30 0 0 chrX 7218128 7218161 -15204666 + AT_rich Low_complexity Low_complexity 1 33 0 1 640 195 42 0 0 chrX 7218484 7218508 -15204319 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 640 244 273 15 0 chrX 7218542 7218608 -15204219 + GA-rich Low_complexity Low_complexity 2 68 0 1 640 21 0 0 0 chrX 7218997 7219018 -15203809 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 227 31 31 0 chrX 7219448 7219480 -15203347 + (CATATA)n Simple_repeat Simple_repeat 1 33 0 1 640 34 0 0 0 chrX 7222768 7222802 -15200025 + AT_rich Low_complexity Low_complexity 1 34 0 1 640 210 37 0 0 chrX 7223158 7223185 -15199642 + (A)n Simple_repeat Simple_repeat 1 27 0 1 640 197 119 24 0 chrX 7223273 7223315 -15199512 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 640 189 121 0 0 chrX 7225242 7225275 -15197552 + (TAA)n Simple_repeat Simple_repeat 3 35 0 1 640 189 0 0 0 chrX 7226945 7226966 -15195861 + (A)n Simple_repeat Simple_repeat 1 21 0 1 640 26 64 0 0 chrX 7229049 7229096 -15193731 + AT_rich Low_complexity Low_complexity 1 47 0 1 640 204 222 0 0 chrX 7230905 7230950 -15191877 + CT-rich Low_complexity Low_complexity 1 45 0 1 640 209 208 0 0 chrX 7231277 7231325 -15191502 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 640 29 28 0 0 chrX 7235147 7235183 -15187644 + AT_rich Low_complexity Low_complexity 1 36 0 1 640 21 57 0 0 chrX 7236730 7236765 -15186062 + AT_rich Low_complexity Low_complexity 1 35 0 1 640 237 33 0 0 chrX 7237667 7237697 -15185130 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 640 27 62 0 0 chrX 7238068 7238116 -15184711 + AT_rich Low_complexity Low_complexity 1 48 0 1 640 21 0 0 0 chrX 7239544 7239565 -15183262 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 21 0 0 0 chrX 7239772 7239793 -15183034 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 22 35 0 0 chrX 7240119 7240148 -15182679 + AT_rich Low_complexity Low_complexity 1 29 0 1 640 30 0 0 0 chrX 7240241 7240271 -15182556 + AT_rich Low_complexity Low_complexity 1 30 0 1 640 180 77 0 0 chrX 7241339 7241365 -15181462 + (GATTG)n Simple_repeat Simple_repeat 2 27 0 1 640 255 31 0 0 chrX 7241416 7241448 -15181379 + (TATTG)n Simple_repeat Simple_repeat 2 33 0 1 640 214 343 0 10 chrX 7243519 7243619 -15179208 + A-rich Low_complexity Low_complexity 2 100 0 1 640 29 0 0 0 chrX 7244496 7244525 -15178302 + AT_rich Low_complexity Low_complexity 1 29 0 1 640 23 54 0 0 chrX 7247416 7247453 -15175374 + AT_rich Low_complexity Low_complexity 1 37 0 1 640 23 0 0 0 chrX 7249343 7249366 -15173461 + AT_rich Low_complexity Low_complexity 1 23 0 1 640 197 158 0 34 chrX 7251112 7251171 -15171656 + A-rich Low_complexity Low_complexity 1 57 0 1 640 199 157 19 19 chrX 7253837 7253889 -15168938 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 640 27 0 0 0 chrX 7254088 7254115 -15168712 + AT_rich Low_complexity Low_complexity 1 27 0 1 640 23 33 0 0 chrX 7254374 7254404 -15168423 + AT_rich Low_complexity Low_complexity 1 30 0 1 640 197 132 0 26 chrX 7256196 7256235 -15166592 + (CGGA)n Simple_repeat Simple_repeat 2 39 0 1 640 225 259 0 18 chrX 7256983 7257038 -15165789 + (CAG)n Simple_repeat Simple_repeat 3 56 0 1 640 201 74 0 0 chrX 7258212 7258239 -15164588 + (TTCG)n Simple_repeat Simple_repeat 3 29 0 1 640 22 0 0 0 chrX 7263281 7263303 -15159524 + AT_rich Low_complexity Low_complexity 1 22 0 1 640 22 0 0 0 chrX 7264452 7264474 -15158353 + AT_rich Low_complexity Low_complexity 1 22 0 1 640 222 128 0 0 chrX 7265506 7265545 -15157282 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1 640 214 146 20 20 chrX 7268148 7268197 -15154630 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1 640 23 0 0 0 chrX 7270683 7270706 -15152121 + AT_rich Low_complexity Low_complexity 1 23 0 1 640 25 31 0 0 chrX 7271023 7271055 -15151772 + AT_rich Low_complexity Low_complexity 1 32 0 1 640 25 51 0 0 chrX 7272835 7272874 -15149953 + AT_rich Low_complexity Low_complexity 1 39 0 1 640 201 162 0 0 chrX 7273247 7273284 -15149543 + T-rich Low_complexity Low_complexity 1 37 0 1 640 26 0 0 0 chrX 7274407 7274433 -15148394 + AT_rich Low_complexity Low_complexity 1 26 0 1 640 26 0 0 0 chrX 7275945 7275971 -15146856 + AT_rich Low_complexity Low_complexity 1 26 0 1 640 33 43 0 0 chrX 7277072 7277119 -15145708 + AT_rich Low_complexity Low_complexity 1 47 0 1 640 21 0 0 0 chrX 7280755 7280776 -15142051 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 210 118 0 0 chrX 7282854 7282888 -15139939 + (T)n Simple_repeat Simple_repeat 1 34 0 1 640 258 32 0 0 chrX 7283933 7283964 -15138863 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 640 317 304 101 54 chrX 7287263 7287716 -15135111 + SAR_DM Satellite Satellite 1 474 -666 1 640 195 125 0 0 chrX 7289010 7289050 -15133777 + (T)n Simple_repeat Simple_repeat 1 40 0 1 640 195 42 0 0 chrX 7289305 7289329 -15133498 + (TCCA)n Simple_repeat Simple_repeat 4 27 0 1 640 34 106 0 0 chrX 7289629 7289761 -15133066 + AT_rich Low_complexity Low_complexity 1 132 0 1 640 60 15 0 0 chrX 7298003 7298070 -15124757 + AT_rich Low_complexity Low_complexity 1 67 0 1 640 180 152 0 0 chrX 7298263 7298296 -15124531 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 1 640 220 254 17 0 chrX 7298356 7298415 -15124412 + (CAGC)n Simple_repeat Simple_repeat 4 63 0 1 640 180 0 0 0 chrX 7300792 7300812 -15122015 + (ACTTG)n Simple_repeat Simple_repeat 5 24 0 1 640 201 182 0 64 chrX 7300914 7300961 -15121866 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 1 640 22 35 0 0 chrX 7305260 7305289 -15117538 + AT_rich Low_complexity Low_complexity 1 29 0 1 640 53 69 0 0 chrX 7305382 7305484 -15117343 + AT_rich Low_complexity Low_complexity 1 102 0 1 640 24 0 0 0 chrX 7306301 7306325 -15116502 + AT_rich Low_complexity Low_complexity 1 24 0 1 640 27 29 0 0 chrX 7306958 7306992 -15115835 + AT_rich Low_complexity Low_complexity 1 34 0 1 640 22 35 0 0 chrX 7307329 7307358 -15115469 + AT_rich Low_complexity Low_complexity 1 29 0 1 640 21 36 0 0 chrX 7309807 7309835 -15112992 + AT_rich Low_complexity Low_complexity 1 28 0 1 640 225 196 0 0 chrX 7310218 7310264 -15112563 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 1 640 183 100 0 0 chrX 7310806 7310836 -15111991 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 640 30 27 0 0 chrX 7311499 7311536 -15111291 + AT_rich Low_complexity Low_complexity 1 37 0 1 640 210 192 0 0 chrX 7312679 7312731 -15110096 + T-rich Low_complexity Low_complexity 1 52 0 1 640 22 35 0 0 chrX 7313028 7313057 -15109770 + AT_rich Low_complexity Low_complexity 1 29 0 1 640 587 154 221 40 chrX 7315987 7316136 -15106691 + DNAREP1_DM LINE Penelope 417 592 -2 1 640 21 71 0 0 chrX 7317187 7317229 -15105598 + AT_rich Low_complexity Low_complexity 1 42 0 1 640 21 0 0 0 chrX 7317314 7317335 -15105492 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 237 151 0 0 chrX 7318642 7318695 -15104132 + (TTG)n Simple_repeat Simple_repeat 3 55 0 1 640 238 141 36 60 chrX 7322376 7322459 -15100368 + ROO_I LTR Pao 657 737 -7519 1 640 25 0 0 0 chrX 7322706 7322731 -15100096 + AT_rich Low_complexity Low_complexity 1 25 0 1 640 274 231 15 0 chrX 7323395 7323460 -15099367 + (CTG)n Simple_repeat Simple_repeat 3 68 0 1 640 303 121 0 0 chrX 7324521 7324579 -15098248 + (TCCA)n Simple_repeat Simple_repeat 4 61 0 1 640 23 0 0 0 chrX 7324971 7324994 -15097833 + AT_rich Low_complexity Low_complexity 1 23 0 1 640 22 88 0 0 chrX 7327737 7327794 -15095033 + AT_rich Low_complexity Low_complexity 1 57 0 1 640 311 304 0 0 chrX 7328440 7328552 -15094275 + T-rich Low_complexity Low_complexity 1 112 0 1 640 23 33 0 0 chrX 7330277 7330307 -15092520 + AT_rich Low_complexity Low_complexity 1 30 0 1 640 26 30 0 0 chrX 7331828 7331861 -15090966 + AT_rich Low_complexity Low_complexity 1 33 0 1 640 225 0 0 0 chrX 7332891 7332916 -15089911 + (A)n Simple_repeat Simple_repeat 1 25 0 1 640 21 0 0 0 chrX 7333938 7333959 -15088868 + AT_rich Low_complexity Low_complexity 1 21 0 1 640 195 129 0 0 chrX 7334927 7334958 -15087869 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1 640 355 293 42 38 chrX 7335964 7336391 -15086436 - SAR_DM Satellite Satellite -449 428 1 1 640 22 56 0 0 chrX 7337026 7337062 -15085765 + AT_rich Low_complexity Low_complexity 1 36 0 1 640 27 49 0 0 chrX 7338444 7338485 -15084342 + AT_rich Low_complexity Low_complexity 1 41 0 1 640 22 0 0 0 chrX 7339532 7339554 -15083273 + AT_rich Low_complexity Low_complexity 1 22 0 1 641 27 0 0 0 chrX 7340379 7340406 -15082421 + AT_rich Low_complexity Low_complexity 1 27 0 1 641 216 0 0 0 chrX 7341195 7341219 -15081608 + (CCAA)n Simple_repeat Simple_repeat 3 26 0 1 641 185 0 40 0 chrX 7341957 7341982 -15080845 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 1 641 239 54 0 26 chrX 7342560 7342598 -15080229 + (ACTG)n Simple_repeat Simple_repeat 3 39 0 1 641 228 122 0 0 chrX 7343445 7343486 -15079341 + (CCAA)n Simple_repeat Simple_repeat 3 43 0 1 641 183 42 0 0 chrX 7347922 7347946 -15074881 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 641 215 133 0 22 chrX 7348096 7348142 -15074685 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1 641 21 89 0 0 chrX 7348345 7348401 -15074426 + AT_rich Low_complexity Low_complexity 1 56 0 1 641 22 56 0 0 chrX 7348798 7348834 -15073993 + AT_rich Low_complexity Low_complexity 1 36 0 1 641 208 139 0 27 chrX 7350124 7350161 -15072666 + CT-rich Low_complexity Low_complexity 1 36 0 1 641 200 143 0 28 chrX 7352007 7352043 -15070784 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 641 24 0 0 0 chrX 7352439 7352463 -15070364 + AT_rich Low_complexity Low_complexity 1 24 0 1 641 23 0 0 0 chrX 7352927 7352950 -15069877 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 21 36 0 0 chrX 7354352 7354380 -15068447 + AT_rich Low_complexity Low_complexity 1 28 0 1 641 22 88 0 0 chrX 7355172 7355229 -15067598 + AT_rich Low_complexity Low_complexity 1 57 0 1 641 321 89 0 0 chrX 7356296 7356341 -15066486 + (TCCA)n Simple_repeat Simple_repeat 2 46 0 1 641 218 224 20 0 chrX 7356537 7356586 -15066241 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 1 641 228 122 0 0 chrX 7359672 7359713 -15063114 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 641 195 42 0 0 chrX 7359828 7359852 -15062975 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 641 23 0 0 0 chrX 7360206 7360229 -15062598 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 207 170 0 0 chrX 7361522 7361569 -15061258 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 641 180 0 0 0 chrX 7361849 7361869 -15060958 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 641 227 127 35 35 chrX 7364304 7364361 -15058466 + (CTATA)n Simple_repeat Simple_repeat 2 58 0 1 641 209 132 26 0 chrX 7365369 7365407 -15057420 + (ATTTG)n Simple_repeat Simple_repeat 3 41 0 1 641 25 51 0 0 chrX 7366514 7366553 -15056274 + AT_rich Low_complexity Low_complexity 1 39 0 1 641 180 111 0 0 chrX 7367754 7367781 -15055046 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 641 25 0 0 0 chrX 7371706 7371731 -15051096 + AT_rich Low_complexity Low_complexity 1 25 0 1 641 26 30 0 0 chrX 7372655 7372688 -15050139 + AT_rich Low_complexity Low_complexity 1 33 0 1 641 185 65 0 31 chrX 7374444 7374476 -15048351 + (TATAA)n Simple_repeat Simple_repeat 5 35 0 1 641 22 35 0 0 chrX 7374494 7374523 -15048304 + AT_rich Low_complexity Low_complexity 1 29 0 1 641 12376 5 0 3 chrX 7374879 7376309 -15046518 - LINEJ1_DM LINE Jockey 0 5020 3595 1 641 203 261 0 0 chrX 7376327 7376373 -15046454 + A-rich Low_complexity Low_complexity 2 47 0 1 641 40 37 0 0 chrX 7376889 7376943 -15045884 + AT_rich Low_complexity Low_complexity 1 54 0 1 641 23 0 0 0 chrX 7377836 7377859 -15044968 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 182 37 37 0 chrX 7379291 7379318 -15043509 + (TTATG)n Simple_repeat Simple_repeat 5 32 0 1 641 210 91 0 0 chrX 7380071 7380104 -15042723 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 641 180 0 0 0 chrX 7380442 7380462 -15042365 + (A)n Simple_repeat Simple_repeat 1 20 0 1 641 30 0 0 0 chrX 7380549 7380579 -15042248 + AT_rich Low_complexity Low_complexity 1 30 0 1 641 25 75 0 0 chrX 7381153 7381206 -15041621 + AT_rich Low_complexity Low_complexity 1 53 0 1 641 237 108 0 0 chrX 7382149 7382186 -15040641 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 641 21 0 0 0 chrX 7383550 7383571 -15039256 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 192 97 0 0 chrX 7388072 7388103 -15034724 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 641 22 80 0 0 chrX 7390351 7390401 -15032426 + AT_rich Low_complexity Low_complexity 1 50 0 1 641 27 29 0 0 chrX 7390448 7390482 -15032345 + AT_rich Low_complexity Low_complexity 1 34 0 1 641 23 0 0 0 chrX 7400432 7400455 -15022372 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 27 49 0 0 chrX 7401069 7401110 -15021717 + AT_rich Low_complexity Low_complexity 1 41 0 1 641 21 0 0 0 chrX 7402744 7402765 -15020062 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 234 0 0 0 chrX 7402830 7402856 -15019971 + (TAAAAA)n Simple_repeat Simple_repeat 5 30 0 1 641 189 159 0 0 chrX 7408220 7408264 -15014563 + A-rich Low_complexity Low_complexity 1 44 0 1 641 30 69 0 0 chrX 7409909 7409967 -15012860 + AT_rich Low_complexity Low_complexity 1 58 0 1 641 261 216 0 0 chrX 7410841 7410915 -15011912 + ROO_I LTR Pao 655 728 -7528 1 641 255 203 0 0 chrX 7412522 7412596 -15010231 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 641 222 62 0 0 chrX 7414353 7414385 -15008442 + (T)n Simple_repeat Simple_repeat 1 32 0 1 641 22 35 0 0 chrX 7415542 7415571 -15007256 + AT_rich Low_complexity Low_complexity 1 29 0 1 641 245 186 41 41 chrX 7418292 7418365 -15004462 + (TTCGG)n Simple_repeat Simple_repeat 1 73 0 1 641 237 119 0 0 chrX 7420980 7421022 -15001805 + (CAGT)n Simple_repeat Simple_repeat 3 44 0 1 641 230 200 0 18 chrX 7421496 7421552 -15001275 + A-rich Low_complexity Low_complexity 4 58 0 1 641 204 86 57 0 chrX 7427443 7427478 -14995349 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 1 641 273 57 0 0 chrX 7431549 7431584 -14991243 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 641 568 137 120 0 chrX 7432057 7432174 -14990653 + DNAREP1_DM LINE Penelope 464 594 0 1 641 30 0 0 0 chrX 7432376 7432406 -14990421 + AT_rich Low_complexity Low_complexity 1 30 0 1 641 21 0 0 0 chrX 7433395 7433416 -14989411 + AT_rich Low_complexity Low_complexity 1 21 0 1 641 216 149 0 0 chrX 7434787 7434834 -14987993 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1 641 235 194 32 0 chrX 7434858 7434920 -14987907 + A-rich Low_complexity Low_complexity 1 64 0 1 641 22 88 0 0 chrX 7435029 7435086 -14987741 + AT_rich Low_complexity Low_complexity 1 57 0 1 641 288 111 0 0 chrX 7435290 7435335 -14987492 + (TCCG)n Simple_repeat Simple_repeat 3 47 0 1 641 218 204 0 0 chrX 7437659 7437708 -14985119 + A-rich Low_complexity Low_complexity 1 49 0 1 641 219 125 0 0 chrX 7438592 7438632 -14984195 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 641 212 179 0 0 chrX 7439349 7439388 -14983439 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 641 21 57 0 0 chrX 7442425 7442460 -14980367 + AT_rich Low_complexity Low_complexity 1 35 0 1 641 23 0 0 0 chrX 7442908 7442931 -14979896 + AT_rich Low_complexity Low_complexity 1 23 0 1 641 22 0 0 0 chrX 7443237 7443259 -14979568 + AT_rich Low_complexity Low_complexity 1 22 0 1 641 24 0 0 0 chrX 7443600 7443624 -14979203 + AT_rich Low_complexity Low_complexity 1 24 0 1 641 24 0 0 0 chrX 7444710 7444734 -14978093 + AT_rich Low_complexity Low_complexity 1 24 0 1 641 37 81 0 0 chrX 7448794 7448880 -14973947 + AT_rich Low_complexity Low_complexity 1 86 0 1 641 24 0 0 0 chrX 7451867 7451891 -14970936 + AT_rich Low_complexity Low_complexity 1 24 0 1 641 26 74 0 0 chrX 7451973 7452027 -14970800 + AT_rich Low_complexity Low_complexity 1 54 0 1 641 261 83 0 0 chrX 7452421 7452457 -14970370 + (AACTG)n Simple_repeat Simple_repeat 5 40 0 1 641 249 196 0 0 chrX 7453405 7453461 -14969366 + (CGAAT)n Simple_repeat Simple_repeat 4 59 0 1 641 192 40 0 0 chrX 7455344 7455369 -14967458 + (T)n Simple_repeat Simple_repeat 1 25 0 1 641 245 29 29 0 chrX 7456383 7456417 -14966410 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 641 192 77 0 0 chrX 7458730 7458756 -14964071 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1 641 399 56 0 0 chrX 7460901 7460955 -14961872 + (CATAC)n Simple_repeat Simple_repeat 5 58 0 1 641 22 35 0 0 chrX 7461255 7461284 -14961543 + AT_rich Low_complexity Low_complexity 1 29 0 1 641 29 28 0 0 chrX 7461952 7461988 -14960839 + AT_rich Low_complexity Low_complexity 1 36 0 1 641 210 191 21 0 chrX 7462420 7462467 -14960360 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 1 641 22 35 0 0 chrX 7462499 7462528 -14960299 + AT_rich Low_complexity Low_complexity 1 29 0 1 641 210 167 0 0 chrX 7463531 7463567 -14959260 + (ATTCG)n Simple_repeat Simple_repeat 2 37 0 1 641 26 82 0 0 chrX 7466367 7466428 -14956399 + AT_rich Low_complexity Low_complexity 1 61 0 1 641 27 73 0 0 chrX 7466768 7466823 -14956004 + AT_rich Low_complexity Low_complexity 1 55 0 1 641 240 35 0 0 chrX 7467236 7467265 -14955562 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 641 276 77 0 0 chrX 7467767 7467806 -14955021 + (TTCGG)n Simple_repeat Simple_repeat 4 42 0 1 641 201 39 0 0 chrX 7470397 7470423 -14952404 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1 642 213 265 0 0 chrX 7471705 7471773 -14951054 + T-rich Low_complexity Low_complexity 2 69 0 1 642 192 97 0 0 chrX 7472418 7472449 -14950378 + (A)n Simple_repeat Simple_repeat 1 31 0 1 642 26 64 0 0 chrX 7474902 7474949 -14947878 + AT_rich Low_complexity Low_complexity 1 47 0 1 642 24 0 0 0 chrX 7477165 7477189 -14945638 + AT_rich Low_complexity Low_complexity 1 24 0 1 642 183 42 0 0 chrX 7477511 7477535 -14945292 + (A)n Simple_repeat Simple_repeat 1 24 0 1 642 198 0 0 0 chrX 7477780 7477802 -14945025 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 642 216 241 0 0 chrX 7477925 7478004 -14944823 + (ACTG)n Simple_repeat Simple_repeat 4 82 0 1 642 40 59 0 0 chrX 7478280 7478348 -14944479 + AT_rich Low_complexity Low_complexity 1 68 0 1 642 231 88 0 0 chrX 7479006 7479040 -14943787 + (TTTCG)n Simple_repeat Simple_repeat 4 37 0 1 642 195 42 0 0 chrX 7480546 7480570 -14942257 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 642 28 61 0 0 chrX 7482693 7482742 -14940085 + AT_rich Low_complexity Low_complexity 1 49 0 1 642 186 167 0 0 chrX 7483488 7483524 -14939303 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 642 21 57 0 0 chrX 7483877 7483912 -14938915 + AT_rich Low_complexity Low_complexity 1 35 0 1 642 204 67 0 0 chrX 7484053 7484083 -14938744 + (T)n Simple_repeat Simple_repeat 1 30 0 1 642 21 0 0 0 chrX 7484123 7484144 -14938683 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 186 43 0 0 chrX 7491093 7491116 -14931711 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 642 254 278 0 14 chrX 7491401 7491474 -14931353 + (CTG)n Simple_repeat Simple_repeat 3 74 0 1 642 26 101 0 0 chrX 7491887 7491976 -14930851 + AT_rich Low_complexity Low_complexity 1 89 0 1 642 31 0 0 0 chrX 7493197 7493228 -14929599 + AT_rich Low_complexity Low_complexity 1 31 0 1 642 187 54 0 51 chrX 7493748 7493787 -14929040 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 1 642 27 0 0 0 chrX 7494146 7494173 -14928654 + AT_rich Low_complexity Low_complexity 1 27 0 1 642 216 135 0 0 chrX 7494706 7494743 -14928084 + (T)n Simple_repeat Simple_repeat 1 37 0 1 642 22 0 0 0 chrX 7496147 7496169 -14926658 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 33 0 0 0 chrX 7498275 7498308 -14924519 + AT_rich Low_complexity Low_complexity 1 33 0 1 642 231 108 69 46 chrX 7499417 7499504 -14923323 + (TTATA)n Simple_repeat Simple_repeat 4 92 0 1 642 29 90 0 0 chrX 7500136 7500214 -14922613 + AT_rich Low_complexity Low_complexity 1 78 0 1 642 21 36 0 0 chrX 7501701 7501729 -14921098 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 218 220 0 17 chrX 7502599 7502659 -14920168 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 642 198 171 0 0 chrX 7502892 7502933 -14919894 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1 642 207 206 21 32 chrX 7503001 7503096 -14919731 + (CAA)n Simple_repeat Simple_repeat 3 96 0 1 642 229 256 22 34 chrX 7505687 7505776 -14917051 + A-rich Low_complexity Low_complexity 2 89 0 1 642 27 0 0 0 chrX 7505993 7506020 -14916807 + AT_rich Low_complexity Low_complexity 1 27 0 1 642 224 143 24 0 chrX 7506293 7506335 -14916492 + (CATAC)n Simple_repeat Simple_repeat 2 44 0 1 642 21 0 0 0 chrX 7506644 7506665 -14916162 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 285 29 0 0 chrX 7506798 7506832 -14915995 + (CTATA)n Simple_repeat Simple_repeat 3 36 0 1 642 213 94 0 0 chrX 7506838 7506870 -14915957 + (CGAAA)n Simple_repeat Simple_repeat 4 35 0 1 642 233 163 0 20 chrX 7507879 7507929 -14914898 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 642 22 88 0 0 chrX 7511102 7511159 -14911668 + AT_rich Low_complexity Low_complexity 1 57 0 1 642 21 0 0 0 chrX 7511664 7511685 -14911142 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 261 57 0 0 chrX 7512825 7512860 -14909967 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 1 642 201 39 0 0 chrX 7513068 7513094 -14909733 + (T)n Simple_repeat Simple_repeat 1 26 0 1 642 357 125 0 0 chrX 7515517 7515573 -14907254 + (CAT)n Simple_repeat Simple_repeat 3 58 0 1 642 205 29 0 56 chrX 7517508 7517544 -14905283 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 1 642 249 235 0 0 chrX 7518387 7518438 -14904389 + MAX_I LTR Pao 490 540 -7374 1 642 232 330 0 0 chrX 7518503 7518609 -14904218 + T-rich Low_complexity Low_complexity 1 106 0 1 642 198 71 0 0 chrX 7518783 7518811 -14904016 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1 642 198 103 0 0 chrX 7519371 7519400 -14903427 + (TCG)n Simple_repeat Simple_repeat 3 31 0 1 642 232 241 0 0 chrX 7521122 7521180 -14901647 + GA-rich Low_complexity Low_complexity 2 59 0 1 642 201 132 0 0 chrX 7521337 7521375 -14901452 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 642 34 42 0 0 chrX 7521932 7521980 -14900847 + AT_rich Low_complexity Low_complexity 1 48 0 1 642 189 0 0 0 chrX 7522661 7522682 -14900145 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 642 200 273 0 35 chrX 7522745 7522802 -14900025 + A-rich Low_complexity Low_complexity 1 55 0 1 642 198 0 0 0 chrX 7522930 7522952 -14899875 + (CCGAA)n Simple_repeat Simple_repeat 4 25 0 1 642 22 0 0 0 chrX 7523108 7523130 -14899697 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 209 211 19 0 chrX 7523386 7523438 -14899389 + GA-rich Low_complexity Low_complexity 1 53 0 1 642 216 0 0 0 chrX 7524059 7524083 -14898744 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 642 211 289 0 40 chrX 7524381 7524482 -14898345 + (CATATA)n Simple_repeat Simple_repeat 5 101 0 1 642 268 250 25 0 chrX 7524609 7524689 -14898138 + T-rich Low_complexity Low_complexity 3 84 0 1 642 186 43 0 0 chrX 7526033 7526056 -14896771 + (T)n Simple_repeat Simple_repeat 1 23 0 1 642 226 254 16 0 chrX 7526137 7526200 -14896627 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 1 642 207 0 0 0 chrX 7527054 7527077 -14895750 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 642 201 167 0 0 chrX 7527128 7527164 -14895663 + (TTG)n Simple_repeat Simple_repeat 3 38 0 1 642 349 202 18 27 chrX 7527214 7527326 -14895501 + ROO_I LTR Pao 633 743 -7513 1 642 209 208 0 0 chrX 7527574 7527622 -14895205 + A-rich Low_complexity Low_complexity 1 48 0 1 642 189 154 0 0 chrX 7527915 7527954 -14894873 + (CAT)n Simple_repeat Simple_repeat 3 41 0 1 642 213 39 0 0 chrX 7528907 7528933 -14893894 + (CACAG)n Simple_repeat Simple_repeat 3 28 0 1 642 224 156 0 22 chrX 7530803 7530849 -14891978 + CT-rich Low_complexity Low_complexity 1 45 0 1 642 183 204 0 0 chrX 7530885 7530934 -14891893 + (CAA)n Simple_repeat Simple_repeat 1 49 0 1 642 207 346 0 0 chrX 7530997 7531075 -14891752 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 642 200 167 0 0 chrX 7531987 7532017 -14890810 + (CAG)n Simple_repeat Simple_repeat 2 31 0 1 642 234 0 0 0 chrX 7532667 7532693 -14890134 + (TCG)n Simple_repeat Simple_repeat 2 27 0 1 642 201 94 0 0 chrX 7535410 7535442 -14887385 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 642 213 192 0 37 chrX 7535483 7535537 -14887290 + T-rich Low_complexity Low_complexity 2 53 0 1 642 24 32 0 0 chrX 7535582 7535613 -14887214 + AT_rich Low_complexity Low_complexity 1 31 0 1 642 189 94 0 0 chrX 7537414 7537446 -14885381 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 642 267 198 7 127 chrX 7539827 7539977 -14882850 + ROO_I LTR Pao 609 740 -7516 1 642 218 146 0 40 chrX 7540268 7540318 -14882509 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1 642 186 208 0 0 chrX 7540368 7540421 -14882406 + (CAG)n Simple_repeat Simple_repeat 1 53 0 1 642 309 141 0 0 chrX 7540497 7540568 -14882259 + (GGA)n Simple_repeat Simple_repeat 3 73 0 1 642 309 257 0 0 chrX 7540837 7540973 -14881854 + (CAA)n Simple_repeat Simple_repeat 1 136 0 1 642 32 0 0 0 chrX 7544345 7544377 -14878450 + AT_rich Low_complexity Low_complexity 1 32 0 1 642 258 156 0 0 chrX 7544688 7544733 -14878094 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 642 206 128 0 25 chrX 7545621 7545661 -14877166 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 642 204 111 0 0 chrX 7547592 7547628 -14875199 + (CATCT)n Simple_repeat Simple_repeat 1 36 0 1 642 231 125 0 0 chrX 7549803 7549843 -14872984 + (ACTG)n Simple_repeat Simple_repeat 3 42 0 1 642 212 200 0 22 chrX 7550106 7550152 -14872675 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 1 642 274 253 52 10 chrX 7550466 7550562 -14872265 + T-rich Low_complexity Low_complexity 4 103 0 1 642 24 0 0 0 chrX 7551171 7551195 -14871632 + AT_rich Low_complexity Low_complexity 1 24 0 1 642 27 0 0 0 chrX 7554154 7554181 -14868646 + AT_rich Low_complexity Low_complexity 1 27 0 1 642 273 57 0 0 chrX 7554196 7554231 -14868596 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 642 221 222 0 0 chrX 7555029 7555074 -14867753 + (CCG)n Simple_repeat Simple_repeat 2 46 0 1 642 22 0 0 0 chrX 7555221 7555243 -14867584 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 266 195 13 0 chrX 7555691 7555768 -14867059 + (TTG)n Simple_repeat Simple_repeat 2 79 0 1 642 212 59 29 0 chrX 7555859 7555893 -14866934 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 642 211 176 0 0 chrX 7556487 7556521 -14866306 + (CCG)n Simple_repeat Simple_repeat 1 34 0 1 642 272 149 0 75 chrX 7556521 7556601 -14866226 + (CAA)n Simple_repeat Simple_repeat 1 74 0 1 642 290 219 0 16 chrX 7556689 7556810 -14866017 + (CAG)n Simple_repeat Simple_repeat 1 119 0 1 642 195 129 0 0 chrX 7557616 7557647 -14865180 + (TATG)n Simple_repeat Simple_repeat 1 31 0 1 642 377 156 0 13 chrX 7559452 7559530 -14863297 + (CAA)n Simple_repeat Simple_repeat 2 78 0 1 642 186 43 0 0 chrX 7560376 7560399 -14862428 + (A)n Simple_repeat Simple_repeat 1 23 0 1 642 198 0 0 0 chrX 7560599 7560621 -14862206 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 642 192 40 0 0 chrX 7561371 7561396 -14861431 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 642 180 0 0 0 chrX 7562023 7562043 -14860784 + (T)n Simple_repeat Simple_repeat 1 20 0 1 642 261 98 0 0 chrX 7562261 7562302 -14860525 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 642 270 0 0 0 chrX 7562589 7562619 -14860208 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 642 422 273 6 22 chrX 7566528 7566708 -14856119 + (CAG)n Simple_repeat Simple_repeat 3 179 0 1 642 265 239 0 80 chrX 7568534 7568634 -14854193 + ROO_I LTR Pao 634 725 -7531 1 642 21 36 0 0 chrX 7568813 7568841 -14853986 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 185 108 0 26 chrX 7569380 7569418 -14853409 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1 642 28 61 0 0 chrX 7569720 7569769 -14853058 + AT_rich Low_complexity Low_complexity 1 49 0 1 642 27 62 0 0 chrX 7570025 7570073 -14852754 + AT_rich Low_complexity Low_complexity 1 48 0 1 642 22 0 0 0 chrX 7570412 7570434 -14852393 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 22 0 0 0 chrX 7570479 7570501 -14852326 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 29 28 0 0 chrX 7570605 7570641 -14852186 + AT_rich Low_complexity Low_complexity 1 36 0 1 642 210 91 0 0 chrX 7570743 7570776 -14852051 + (TTA)n Simple_repeat Simple_repeat 3 35 0 1 642 275 49 24 0 chrX 7570777 7570818 -14852009 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 642 214 224 12 50 chrX 7572283 7572363 -14850464 + A-rich Low_complexity Low_complexity 3 79 0 1 642 26 30 0 0 chrX 7572788 7572821 -14850006 + AT_rich Low_complexity Low_complexity 1 33 0 1 642 23 50 0 48 chrX 7573697 7573760 -14849067 + AT_rich Low_complexity Low_complexity 1 60 0 1 642 22 0 0 0 chrX 7576183 7576205 -14846622 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 242 188 0 40 chrX 7576731 7576781 -14846046 + (CATA)n Simple_repeat Simple_repeat 1 48 0 1 642 205 182 29 29 chrX 7576834 7576902 -14845925 + T-rich Low_complexity Low_complexity 1 68 0 1 642 21 0 0 0 chrX 7577807 7577828 -14844999 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 211 216 0 0 chrX 7578153 7578204 -14844623 + T-rich Low_complexity Low_complexity 1 51 0 1 642 22 0 0 0 chrX 7578398 7578420 -14844407 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 215 79 26 0 chrX 7578761 7578799 -14844028 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 642 240 122 0 0 chrX 7578942 7578983 -14843844 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 642 210 206 0 0 chrX 7580275 7580338 -14842489 + (CTG)n Simple_repeat Simple_repeat 3 65 0 1 642 386 19 0 54 chrX 7582114 7582170 -14840657 + (TCC)n Simple_repeat Simple_repeat 3 55 0 1 642 180 111 0 0 chrX 7582559 7582586 -14840241 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 642 666 95 0 0 chrX 7583078 7583173 -14839654 + (TTG)n Simple_repeat Simple_repeat 1 95 0 1 642 256 185 19 0 chrX 7583795 7583849 -14838978 + (CTG)n Simple_repeat Simple_repeat 1 55 0 1 642 402 21 0 0 chrX 7584929 7584976 -14837851 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 642 26 64 0 0 chrX 7585687 7585734 -14837093 + AT_rich Low_complexity Low_complexity 1 47 0 1 642 21 0 0 0 chrX 7590420 7590441 -14832386 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 237 83 0 0 chrX 7590833 7590869 -14831958 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 642 22 0 0 0 chrX 7590943 7590965 -14831862 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 21 0 0 0 chrX 7592381 7592402 -14830425 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 238 254 28 0 chrX 7592713 7592784 -14830043 + A-rich Low_complexity Low_complexity 6 78 0 1 642 220 302 28 0 chrX 7592986 7593092 -14829735 + (TA)n Simple_repeat Simple_repeat 2 110 0 1 642 215 228 0 0 chrX 7593780 7593837 -14828990 + T-rich Low_complexity Low_complexity 1 57 0 1 642 23 33 0 0 chrX 7593946 7593976 -14828851 + AT_rich Low_complexity Low_complexity 1 30 0 1 642 468 0 0 0 chrX 7596580 7596632 -14826195 + (CAA)n Simple_repeat Simple_repeat 3 54 0 1 642 225 226 0 0 chrX 7596733 7596817 -14826010 + GA-rich Low_complexity Low_complexity 2 85 0 1 642 2754 9 8 11 chrX 7596994 7597347 -14825480 + LINEJ1_DM LINE Jockey 4669 5020 0 1 642 180 0 0 0 chrX 7597347 7597367 -14825460 + (A)n Simple_repeat Simple_repeat 1 20 0 1 642 180 77 0 0 chrX 7598514 7598540 -14824287 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 643 338 248 14 42 chrX 7602178 7602321 -14820506 + (CACCAT)n Simple_repeat Simple_repeat 2 140 0 1 643 180 77 0 0 chrX 7606288 7606314 -14816513 + (A)n Simple_repeat Simple_repeat 1 26 0 1 643 462 129 0 0 chrX 7607893 7607978 -14814849 + (CTG)n Simple_repeat Simple_repeat 2 86 0 1 643 366 134 0 0 chrX 7608066 7608133 -14814694 + (CTG)n Simple_repeat Simple_repeat 3 69 0 1 643 306 73 0 0 chrX 7608348 7608389 -14814438 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 643 31 0 0 0 chrX 7610896 7610927 -14811900 + AT_rich Low_complexity Low_complexity 1 31 0 1 643 27 0 0 0 chrX 7611870 7611897 -14810930 + AT_rich Low_complexity Low_complexity 1 27 0 1 643 227 193 0 50 chrX 7612193 7612253 -14810574 + ROO_I LTR Pao 662 718 -7538 1 643 21 0 0 0 chrX 7613282 7613303 -14809524 + AT_rich Low_complexity Low_complexity 1 21 0 1 643 29 28 0 0 chrX 7613863 7613899 -14808928 + AT_rich Low_complexity Low_complexity 1 36 0 1 643 25 0 0 0 chrX 7614721 7614746 -14808081 + AT_rich Low_complexity Low_complexity 1 25 0 1 643 21 0 0 0 chrX 7620081 7620102 -14802725 + AT_rich Low_complexity Low_complexity 1 21 0 1 643 218 125 0 20 chrX 7620302 7620351 -14802476 + (CAT)n Simple_repeat Simple_repeat 2 49 0 1 643 27 29 0 0 chrX 7622553 7622587 -14800240 + AT_rich Low_complexity Low_complexity 1 34 0 1 643 315 193 0 0 chrX 7624149 7624232 -14798595 + (CACCAT)n Simple_repeat Simple_repeat 4 86 0 1 643 22 0 0 0 chrX 7626297 7626319 -14796508 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 24 0 0 0 chrX 7633593 7633617 -14789210 + AT_rich Low_complexity Low_complexity 1 24 0 1 643 252 289 10 0 chrX 7637008 7637105 -14785722 + (TG)n Simple_repeat Simple_repeat 1 98 0 1 643 23 0 0 0 chrX 7639497 7639520 -14783307 + AT_rich Low_complexity Low_complexity 1 23 0 1 643 201 152 0 0 chrX 7641398 7641431 -14781396 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 643 22 35 0 0 chrX 7641659 7641688 -14781139 + AT_rich Low_complexity Low_complexity 1 29 0 1 643 23 0 0 0 chrX 7643979 7644002 -14778825 + AT_rich Low_complexity Low_complexity 1 23 0 1 643 207 114 0 0 chrX 7646612 7646647 -14776180 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 643 1353 319 25 23 chrX 7647114 7647927 -14774900 - SAR_DM Satellite Satellite -435 1037 224 1 643 349 247 0 30 chrX 7647842 7647942 -14774885 + XDMR Unknown Unknown 48 144 -217 1 643 180 0 0 0 chrX 7648774 7648794 -14774033 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 643 21 0 0 0 chrX 7649898 7649919 -14772908 + AT_rich Low_complexity Low_complexity 1 21 0 1 643 235 93 35 69 chrX 7649934 7649992 -14772835 + T-rich Low_complexity Low_complexity 4 59 0 1 643 203 244 0 0 chrX 7651622 7651667 -14771160 + CT-rich Low_complexity Low_complexity 2 46 0 1 643 29 78 0 0 chrX 7653929 7653993 -14768834 + AT_rich Low_complexity Low_complexity 1 64 0 1 643 213 180 0 0 chrX 7654885 7654935 -14767892 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 643 21 0 0 0 chrX 7655431 7655452 -14767375 + AT_rich Low_complexity Low_complexity 1 21 0 1 643 228 185 0 18 chrX 7656330 7656385 -14766442 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 643 23 0 0 0 chrX 7656527 7656550 -14766277 + AT_rich Low_complexity Low_complexity 1 23 0 1 643 32 81 0 0 chrX 7660865 7660939 -14761888 + AT_rich Low_complexity Low_complexity 1 74 0 1 643 22 0 0 0 chrX 7661857 7661879 -14760948 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 279 93 0 0 chrX 7663508 7663551 -14759276 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 643 220 125 0 24 chrX 7663706 7663747 -14759080 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 1 643 213 94 0 0 chrX 7664377 7664409 -14758418 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 643 294 132 0 0 chrX 7667489 7667542 -14755285 + (CTG)n Simple_repeat Simple_repeat 1 53 0 1 643 251 240 10 20 chrX 7668220 7668318 -14754509 + (CA)n Simple_repeat Simple_repeat 1 97 0 1 643 231 36 0 0 chrX 7668660 7668688 -14754139 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 643 180 0 0 0 chrX 7669494 7669514 -14753313 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 643 195 204 0 0 chrX 7670330 7670384 -14752443 + (TGAA)n Simple_repeat Simple_repeat 1 54 0 1 643 23 33 0 0 chrX 7672252 7672282 -14750545 + AT_rich Low_complexity Low_complexity 1 30 0 1 643 266 0 29 0 chrX 7674887 7674921 -14747906 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 643 238 203 34 0 chrX 7674980 7675039 -14747788 + (CAG)n Simple_repeat Simple_repeat 2 62 0 1 643 242 163 0 0 chrX 7677435 7677484 -14745343 + DNAREP1_DM LINE Penelope 546 594 0 1 643 1703 21 0 4 chrX 7678332 7678567 -14744260 - LINEJ1_DM LINE Jockey 0 5020 4787 1 643 309 26 0 0 chrX 7678786 7678824 -14744003 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 643 234 61 0 58 chrX 7679953 7680005 -14742822 + (TATAA)n Simple_repeat Simple_repeat 5 53 0 1 643 226 214 0 0 chrX 7680684 7680726 -14742101 + (CGA)n Simple_repeat Simple_repeat 2 43 0 1 643 1116 281 34 25 chrX 7682756 7683318 -14739509 + SAR_DM Satellite Satellite 246 812 -660 1 643 330 193 24 56 chrX 7683222 7683348 -14739479 - XDMR Unknown Unknown 0 361 240 1 643 22 35 0 0 chrX 7684423 7684452 -14738375 + AT_rich Low_complexity Low_complexity 1 29 0 1 643 23 0 0 0 chrX 7685223 7685246 -14737581 + AT_rich Low_complexity Low_complexity 1 23 0 1 643 25 83 0 0 chrX 7686923 7686983 -14735844 + AT_rich Low_complexity Low_complexity 1 60 0 1 643 31 44 0 0 chrX 7690993 7691038 -14731789 + AT_rich Low_complexity Low_complexity 1 45 0 1 643 201 250 16 0 chrX 7691339 7691403 -14731424 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 643 206 154 26 0 chrX 7692268 7692307 -14730520 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 643 195 114 0 0 chrX 7695061 7695096 -14727731 + (CAT)n Simple_repeat Simple_repeat 2 36 0 1 643 195 69 0 0 chrX 7695471 7695500 -14727327 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 643 180 125 0 0 chrX 7695535 7695567 -14727260 + (CAATT)n Simple_repeat Simple_repeat 4 35 0 1 643 198 71 0 0 chrX 7695621 7695649 -14727178 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 643 204 40 0 0 chrX 7695718 7695743 -14727084 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 643 190 109 21 42 chrX 7696166 7696214 -14726613 + (TTA)n Simple_repeat Simple_repeat 1 47 0 1 643 183 139 0 0 chrX 7697614 7697650 -14725177 + (T)n Simple_repeat Simple_repeat 1 36 0 1 643 203 152 0 0 chrX 7698715 7698748 -14724079 + (CATTT)n Simple_repeat Simple_repeat 4 36 0 1 643 252 0 0 0 chrX 7698804 7698832 -14723995 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1 643 26 0 0 0 chrX 7699226 7699252 -14723575 + AT_rich Low_complexity Low_complexity 1 26 0 1 643 22 0 0 0 chrX 7701455 7701477 -14721350 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 195 100 0 0 chrX 7703464 7703494 -14719333 + (ATG)n Simple_repeat Simple_repeat 1 30 0 1 643 254 190 33 33 chrX 7703943 7704003 -14718824 + (CGAGA)n Simple_repeat Simple_repeat 2 61 0 1 643 267 31 0 0 chrX 7704885 7704917 -14717910 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 643 24 53 0 0 chrX 7705197 7705235 -14717592 + AT_rich Low_complexity Low_complexity 1 38 0 1 643 294 311 7 0 chrX 7706861 7707012 -14715815 - XDMR Unknown Unknown -209 152 1 1 643 1133 303 36 38 chrX 7706911 7708604 -14714223 + SAR_DM Satellite Satellite 1 1688 -242 1 643 689 227 48 42 chrX 7708421 7708734 -14714093 - XDMR_DM Unknown Unknown -10 350 36 1 643 1105 301 40 44 chrX 7708699 7709678 -14713149 + SAR_DM Satellite Satellite 256 1230 -242 1 643 664 230 48 42 chrX 7709495 7709808 -14713019 - XDMR_DM Unknown Unknown -10 350 36 1 643 1159 301 38 42 chrX 7709773 7711824 -14711003 + SAR_DM Satellite Satellite 1 2044 -242 1 643 731 234 35 29 chrX 7711641 7711954 -14710873 - XDMR_DM Unknown Unknown -10 350 36 1 643 1182 301 37 39 chrX 7711918 7713254 -14709573 + SAR_DM Satellite Satellite 1 1333 -242 1 643 689 227 48 42 chrX 7713071 7713384 -14709443 - XDMR_DM Unknown Unknown -10 350 36 1 643 1149 303 38 40 chrX 7713349 7714684 -14708143 + SAR_DM Satellite Satellite 1 1332 -242 1 643 731 234 35 29 chrX 7714501 7714814 -14708013 - XDMR_DM Unknown Unknown -10 350 36 1 643 1178 296 35 30 chrX 7714778 7715714 -14707113 + SAR_DM Satellite Satellite 1 941 -335 1 643 33 25 0 0 chrX 7718287 7718327 -14704500 + AT_rich Low_complexity Low_complexity 1 40 0 1 643 25 75 0 0 chrX 7718387 7718440 -14704387 + AT_rich Low_complexity Low_complexity 1 53 0 1 643 182 37 37 0 chrX 7718911 7718938 -14703889 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 643 321 89 0 0 chrX 7720117 7720162 -14702665 + (CTG)n Simple_repeat Simple_repeat 3 47 0 1 643 29 0 0 0 chrX 7721859 7721888 -14700939 + AT_rich Low_complexity Low_complexity 1 29 0 1 643 23 0 0 0 chrX 7721969 7721992 -14700835 + AT_rich Low_complexity Low_complexity 1 23 0 1 643 232 167 24 0 chrX 7722916 7722958 -14699869 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 643 23 54 0 0 chrX 7724152 7724189 -14698638 + AT_rich Low_complexity Low_complexity 1 37 0 1 643 21 0 0 0 chrX 7726430 7726451 -14696376 + AT_rich Low_complexity Low_complexity 1 21 0 1 643 249 108 0 0 chrX 7727486 7727523 -14695304 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1 643 21 36 0 0 chrX 7727799 7727827 -14695000 + AT_rich Low_complexity Low_complexity 1 28 0 1 643 202 296 0 0 chrX 7729495 7729549 -14693278 + A-rich Low_complexity Low_complexity 2 55 0 1 643 186 133 0 0 chrX 7731694 7731724 -14691103 + (CAG)n Simple_repeat Simple_repeat 3 32 0 1 643 216 0 0 0 chrX 7732623 7732647 -14690180 + (T)n Simple_repeat Simple_repeat 1 24 0 1 643 195 69 0 0 chrX 7732987 7733016 -14689811 + (ATTCG)n Simple_repeat Simple_repeat 1 29 0 1 643 204 143 0 0 chrX 7733026 7733068 -14689759 + (T)n Simple_repeat Simple_repeat 1 42 0 1 644 246 62 0 0 chrX 7734418 7734450 -14688377 + (TTA)n Simple_repeat Simple_repeat 3 34 0 1 644 22 35 0 0 chrX 7734651 7734680 -14688147 + AT_rich Low_complexity Low_complexity 1 29 0 1 644 252 257 0 0 chrX 7735456 7735526 -14687301 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 644 28 0 0 0 chrX 7736108 7736136 -14686691 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 251 161 0 18 chrX 7736271 7736328 -14686499 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 644 213 234 15 15 chrX 7737273 7737338 -14685489 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 644 341 305 24 18 chrX 7738153 7738323 -14684504 + XDMR Unknown Unknown 191 361 0 1 644 907 249 22 11 chrX 7738207 7738483 -14684344 - SAR_DM Satellite Satellite -640 832 554 1 644 201 94 0 0 chrX 7739162 7739194 -14683633 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 644 21 36 0 0 chrX 7739358 7739386 -14683441 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 11875 40 2 1 chrX 7739813 7741246 -14681581 - M4DM DNA Transib 0 1435 1 1 644 22 0 0 0 chrX 7741278 7741300 -14681527 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 233 57 29 0 chrX 7743942 7743977 -14678850 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 644 212 184 0 0 chrX 7744572 7744610 -14678217 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 644 290 156 11 53 chrX 7745286 7745381 -14677446 + (TA)n Simple_repeat Simple_repeat 2 92 0 1 644 245 186 14 0 chrX 7745499 7745569 -14677258 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 644 22 56 0 0 chrX 7745795 7745831 -14676996 + AT_rich Low_complexity Low_complexity 1 36 0 1 644 225 270 67 13 chrX 7746090 7746165 -14676662 + OSVALDO_LTR LTR Gypsy 13 91 -1105 1 644 252 59 0 0 chrX 7746275 7746309 -14676518 + (CAG)n Simple_repeat Simple_repeat 1 34 0 1 644 25 0 0 0 chrX 7746522 7746547 -14676280 + AT_rich Low_complexity Low_complexity 1 25 0 1 644 23 0 0 0 chrX 7749275 7749298 -14673529 + AT_rich Low_complexity Low_complexity 1 23 0 1 644 23 0 0 0 chrX 7750502 7750525 -14672302 + AT_rich Low_complexity Low_complexity 1 23 0 1 644 22 0 0 0 chrX 7750574 7750596 -14672231 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 22 56 0 0 chrX 7751486 7751522 -14671305 + AT_rich Low_complexity Low_complexity 1 36 0 1 644 225 94 0 0 chrX 7753413 7753445 -14669382 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 644 288 0 0 0 chrX 7755073 7755105 -14667722 + (TATG)n Simple_repeat Simple_repeat 1 32 0 1 644 228 259 0 36 chrX 7755373 7755457 -14667370 + (TGGG)n Simple_repeat Simple_repeat 1 81 0 1 644 207 114 0 0 chrX 7756792 7756827 -14666000 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 644 23 0 0 0 chrX 7757560 7757583 -14665244 + AT_rich Low_complexity Low_complexity 1 23 0 1 644 22 0 0 0 chrX 7761227 7761249 -14661578 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 183 42 0 0 chrX 7764119 7764143 -14658684 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 644 215 336 9 0 chrX 7766466 7766576 -14656251 + (CTGGGG)n Simple_repeat Simple_repeat 6 116 0 1 644 38 39 0 0 chrX 7773662 7773714 -14649113 + AT_rich Low_complexity Low_complexity 1 52 0 1 644 22 35 0 0 chrX 7775965 7775994 -14646833 + AT_rich Low_complexity Low_complexity 1 29 0 1 644 423 268 60 37 chrX 7779093 7779391 -14643436 - SAR_DM Satellite Satellite -593 879 575 1 644 575 234 56 17 chrX 7779251 7779429 -14643398 + XDMR Unknown Unknown 1 185 -176 1 644 232 37 0 0 chrX 7781068 7781095 -14641732 + DNAREP1_DM LINE Penelope 568 594 0 1 644 23 0 0 0 chrX 7781156 7781179 -14641648 + AT_rich Low_complexity Low_complexity 1 23 0 1 644 25 0 0 0 chrX 7788000 7788025 -14634802 + AT_rich Low_complexity Low_complexity 1 25 0 1 644 24 32 0 0 chrX 7791151 7791182 -14631645 + AT_rich Low_complexity Low_complexity 1 31 0 1 644 303 93 0 0 chrX 7798041 7798084 -14624743 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 644 28 48 0 0 chrX 7801013 7801055 -14621772 + AT_rich Low_complexity Low_complexity 1 42 0 1 644 189 171 0 0 chrX 7806275 7806310 -14616517 + (CAA)n Simple_repeat Simple_repeat 1 35 0 1 644 225 163 0 0 chrX 7806377 7806426 -14616401 + (CGAAA)n Simple_repeat Simple_repeat 2 50 0 1 644 21 57 0 0 chrX 7807868 7807903 -14614924 + AT_rich Low_complexity Low_complexity 1 35 0 1 644 209 254 0 0 chrX 7811272 7811331 -14611496 + (CCA)n Simple_repeat Simple_repeat 1 59 0 1 644 225 213 0 21 chrX 7814442 7814490 -14608337 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 644 35 54 0 0 chrX 7815582 7815638 -14607189 + AT_rich Low_complexity Low_complexity 1 56 0 1 644 210 179 0 0 chrX 7817358 7817414 -14605413 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 644 334 276 0 0 chrX 7818082 7818198 -14604629 + T-rich Low_complexity Low_complexity 1 116 0 1 644 215 211 17 17 chrX 7819742 7819800 -14603027 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 644 185 139 23 0 chrX 7819854 7819897 -14602930 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 644 297 68 0 0 chrX 7820192 7820236 -14602591 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 644 21 36 0 0 chrX 7820236 7820264 -14602563 + AT_rich Low_complexity Low_complexity 1 28 0 1 644 186 194 0 61 chrX 7821101 7821200 -14601627 + (TTG)n Simple_repeat Simple_repeat 3 95 0 1 644 32 0 0 0 chrX 7827265 7827297 -14595530 + AT_rich Low_complexity Low_complexity 1 32 0 1 644 240 250 12 23 chrX 7830199 7830285 -14592542 + (TG)n Simple_repeat Simple_repeat 1 85 0 1 644 182 174 0 21 chrX 7830354 7830401 -14592426 + (TACGG)n Simple_repeat Simple_repeat 4 49 0 1 644 192 77 0 0 chrX 7830503 7830529 -14592298 + (CGGT)n Simple_repeat Simple_repeat 2 27 0 1 644 183 100 0 0 chrX 7832087 7832117 -14590710 + (TCTTG)n Simple_repeat Simple_repeat 4 33 0 1 644 218 195 0 0 chrX 7832559 7832600 -14590227 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 644 236 222 36 24 chrX 7832899 7832982 -14589845 + (CATA)n Simple_repeat Simple_repeat 2 85 0 1 644 27 0 0 0 chrX 7833322 7833349 -14589478 + AT_rich Low_complexity Low_complexity 1 27 0 1 644 213 208 0 0 chrX 7838755 7838803 -14584024 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 644 218 171 0 0 chrX 7840858 7840893 -14581934 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 1 644 49 66 0 24 chrX 7841311 7841435 -14581392 + AT_rich Low_complexity Low_complexity 1 121 0 1 644 217 180 0 20 chrX 7847094 7847145 -14575682 + A-rich Low_complexity Low_complexity 5 54 0 1 644 21 0 0 0 chrX 7847633 7847654 -14575173 + AT_rich Low_complexity Low_complexity 1 21 0 1 644 21 0 0 0 chrX 7847906 7847927 -14574900 + AT_rich Low_complexity Low_complexity 1 21 0 1 644 26 0 0 0 chrX 7849710 7849736 -14573091 + AT_rich Low_complexity Low_complexity 1 26 0 1 644 207 171 0 0 chrX 7853282 7853317 -14569510 + GA-rich Low_complexity Low_complexity 2 36 0 1 644 219 69 0 0 chrX 7854454 7854483 -14568344 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 644 261 146 0 0 chrX 7854645 7854693 -14568134 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 644 21 0 0 0 chrX 7856716 7856737 -14566090 + GC_rich Low_complexity Low_complexity 1 21 0 1 644 28 71 0 0 chrX 7859178 7859234 -14563593 + AT_rich Low_complexity Low_complexity 1 56 0 1 644 228 35 0 0 chrX 7859730 7859759 -14563068 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 644 217 180 0 20 chrX 7859790 7859841 -14562986 + (TTG)n Simple_repeat Simple_repeat 3 52 0 1 644 251 223 0 21 chrX 7862583 7862679 -14560148 + (TTA)n Simple_repeat Simple_repeat 1 94 0 1 80 231 225 0 0 chrX 7864282 7864353 -14558474 + (CAA)n Simple_repeat Simple_repeat 2 72 0 1 645 191 170 0 21 chrX 7866170 7866218 -14556609 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 645 24 0 0 0 chrX 7867158 7867182 -14555645 + AT_rich Low_complexity Low_complexity 1 24 0 1 645 22 0 0 0 chrX 7869136 7869158 -14553669 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 239 71 24 0 chrX 7869517 7869559 -14553268 + (CGAAA)n Simple_repeat Simple_repeat 2 44 0 1 645 201 167 0 0 chrX 7869826 7869862 -14552965 + T-rich Low_complexity Low_complexity 1 36 0 1 645 204 125 0 0 chrX 7870470 7870502 -14552325 + (A)n Simple_repeat Simple_repeat 1 32 0 1 645 198 0 0 0 chrX 7870770 7870792 -14552035 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 645 259 269 15 0 chrX 7872726 7872793 -14550034 + G-rich Low_complexity Low_complexity 3 70 0 1 645 201 94 0 0 chrX 7872979 7873011 -14549816 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 645 180 77 0 0 chrX 7873067 7873093 -14549734 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 645 235 255 0 0 chrX 7873739 7873790 -14549037 - TART LINE telomeric -1975 12502 12452 1 645 201 74 0 0 chrX 7874854 7874881 -14547946 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 645 22 0 0 0 chrX 7874999 7875021 -14547806 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 195 162 0 0 chrX 7875040 7875077 -14547750 + T-rich Low_complexity Low_complexity 1 37 0 1 645 183 42 0 0 chrX 7876091 7876115 -14546712 + (CGA)n Simple_repeat Simple_repeat 2 25 0 1 645 21 36 0 0 chrX 7877220 7877248 -14545579 + AT_rich Low_complexity Low_complexity 1 28 0 1 645 193 128 43 0 chrX 7880108 7880155 -14542672 + A-rich Low_complexity Low_complexity 4 52 0 1 645 26 0 0 0 chrX 7880169 7880195 -14542632 + AT_rich Low_complexity Low_complexity 1 26 0 1 645 247 169 14 14 chrX 7880222 7880294 -14542533 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 645 25 51 0 0 chrX 7880492 7880531 -14542296 + AT_rich Low_complexity Low_complexity 1 39 0 1 645 25 51 0 0 chrX 7881794 7881833 -14540994 + AT_rich Low_complexity Low_complexity 1 39 0 1 645 270 81 0 0 chrX 7882172 7882209 -14540618 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 1 645 1065 276 55 50 chrX 7883705 7884372 -14538455 + SAR_DM Satellite Satellite 208 878 -594 1 645 531 250 52 37 chrX 7884189 7884459 -14538368 - XDMR_DM Unknown Unknown -11 349 76 1 645 222 62 0 0 chrX 7885224 7885256 -14537571 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 645 205 176 0 0 chrX 7885652 7885686 -14537141 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 645 208 186 23 0 chrX 7885810 7885853 -14536974 + (ATG)n Simple_repeat Simple_repeat 3 46 0 1 645 212 100 0 24 chrX 7886385 7886426 -14536401 + (GATTG)n Simple_repeat Simple_repeat 5 44 0 1 645 189 195 0 0 chrX 7887115 7887156 -14535671 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 645 26 0 0 0 chrX 7889275 7889301 -14533526 + AT_rich Low_complexity Low_complexity 1 26 0 1 645 27 0 0 0 chrX 7891815 7891842 -14530985 + AT_rich Low_complexity Low_complexity 1 27 0 1 645 363 23 0 0 chrX 7893523 7893567 -14529260 + (CAG)n Simple_repeat Simple_repeat 2 45 0 1 645 312 309 0 8 chrX 7894032 7894156 -14528671 + (TCTG)n Simple_repeat Simple_repeat 4 126 0 1 645 324 127 0 0 chrX 7894670 7894725 -14528102 + (ACTG)n Simple_repeat Simple_repeat 1 55 0 1 645 383 239 49 7 chrX 7895014 7895157 -14527670 - XDMR_DM Unknown Unknown -202 158 10 1 645 1035 274 44 39 chrX 7895086 7895700 -14527127 + SAR_DM Satellite Satellite 246 862 -610 1 645 369 236 47 35 chrX 7895557 7895728 -14527099 - XDMR_DM Unknown Unknown -34 326 154 1 645 203 184 0 0 chrX 7896563 7896601 -14526226 + A-rich Low_complexity Low_complexity 1 38 0 1 645 197 65 32 0 chrX 7897958 7897989 -14524838 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 645 22 0 0 0 chrX 7901694 7901716 -14521111 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 240 163 0 0 chrX 7903036 7903079 -14519748 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1 645 29 47 0 0 chrX 7903541 7903584 -14519243 + AT_rich Low_complexity Low_complexity 1 43 0 1 645 33 25 0 0 chrX 7904770 7904810 -14518017 + AT_rich Low_complexity Low_complexity 1 40 0 1 645 224 234 26 0 chrX 7904935 7905012 -14517815 + (TATATG)n Simple_repeat Simple_repeat 4 82 0 1 645 236 167 67 0 chrX 7905088 7905148 -14517679 + T-rich Low_complexity Low_complexity 2 65 0 1 645 267 31 0 0 chrX 7905336 7905368 -14517459 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 645 301 300 10 0 chrX 7906512 7906612 -14516215 + (TG)n Simple_repeat Simple_repeat 2 102 0 1 645 282 29 0 0 chrX 7906687 7906722 -14516105 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 645 198 0 0 0 chrX 7908320 7908342 -14514485 + (T)n Simple_repeat Simple_repeat 1 22 0 1 645 228 67 0 0 chrX 7908602 7908632 -14514195 + (A)n Simple_repeat Simple_repeat 1 30 0 1 645 189 0 0 0 chrX 7909202 7909223 -14513604 + (CAT)n Simple_repeat Simple_repeat 3 23 0 1 645 24 0 0 0 chrX 7909382 7909406 -14513421 + AT_rich Low_complexity Low_complexity 1 24 0 1 645 201 121 0 0 chrX 7909566 7909599 -14513228 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 645 186 0 0 81 chrX 7910267 7910304 -14512523 + (GGGAA)n Simple_repeat Simple_repeat 5 38 0 1 645 203 184 0 0 chrX 7910895 7910933 -14511894 + A-rich Low_complexity Low_complexity 1 38 0 1 645 468 163 0 0 chrX 7911763 7911892 -14510935 + (TATATG)n Simple_repeat Simple_repeat 4 132 0 1 645 201 121 0 0 chrX 7912812 7912845 -14509982 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 645 25 0 0 0 chrX 7913523 7913548 -14509279 + AT_rich Low_complexity Low_complexity 1 25 0 1 645 1127 120 5 0 chrX 7915586 7915778 -14507049 - XDMR Unknown Unknown -168 193 1 1 645 1175 259 52 35 chrX 7915641 7915778 -14507049 + SAR_DM Satellite Satellite 219 516 -956 1 645 2016 111 31 0 chrX 7915778 7916128 -14506699 - XDMR Unknown Unknown 0 361 1 1 645 1384 112 4 8 chrX 7916128 7916363 -14506464 - XDMR Unknown Unknown 0 361 128 1 645 1175 259 52 35 chrX 7916128 7916294 -14506533 + SAR_DM Satellite Satellite 517 882 -590 1 645 27 0 0 0 chrX 7918353 7918380 -14504447 + AT_rich Low_complexity Low_complexity 1 27 0 1 645 24 0 0 0 chrX 7919527 7919551 -14503276 + AT_rich Low_complexity Low_complexity 1 24 0 1 645 295 113 16 16 chrX 7919934 7919997 -14502830 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 645 273 57 0 0 chrX 7920358 7920393 -14502434 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 645 315 150 0 0 chrX 7920618 7920678 -14502149 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 645 23 0 0 0 chrX 7921890 7921913 -14500914 + AT_rich Low_complexity Low_complexity 1 23 0 1 645 23 0 0 0 chrX 7922368 7922391 -14500436 + AT_rich Low_complexity Low_complexity 1 23 0 1 645 198 143 0 0 chrX 7922437 7922472 -14500355 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 645 251 122 20 0 chrX 7922713 7922762 -14500065 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 645 309 89 0 0 chrX 7923270 7923315 -14499512 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 1 645 21 57 0 0 chrX 7923826 7923861 -14498966 + AT_rich Low_complexity Low_complexity 1 35 0 1 645 205 186 0 0 chrX 7924044 7924087 -14498740 + T-rich Low_complexity Low_complexity 1 43 0 1 645 198 0 0 0 chrX 7924654 7924676 -14498151 + (T)n Simple_repeat Simple_repeat 1 22 0 1 645 32 0 0 0 chrX 7925508 7925540 -14497287 + AT_rich Low_complexity Low_complexity 1 32 0 1 645 36184 1 0 0 chrX 7925540 7929762 -14493065 - DOC6_DM LINE Jockey 0 4222 1 1 645 274 162 0 71 chrX 7931825 7931938 -14490889 + T-rich Low_complexity Low_complexity 1 105 0 1 645 26 30 0 0 chrX 7932242 7932275 -14490552 + AT_rich Low_complexity Low_complexity 1 33 0 1 645 225 0 0 0 chrX 7932390 7932415 -14490412 + (T)n Simple_repeat Simple_repeat 1 25 0 1 645 210 250 0 0 chrX 7932459 7932519 -14490308 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 1 645 216 0 0 0 chrX 7932687 7932711 -14490116 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 645 201 94 0 0 chrX 7932981 7933013 -14489814 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 645 180 125 0 0 chrX 7933691 7933723 -14489104 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 1 645 207 173 0 0 chrX 7933852 7933904 -14488923 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 645 225 261 0 0 chrX 7934137 7934206 -14488621 + T-rich Low_complexity Low_complexity 1 69 0 1 645 216 0 0 0 chrX 7934232 7934256 -14488571 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 645 26 0 0 0 chrX 7934493 7934519 -14488308 + AT_rich Low_complexity Low_complexity 1 26 0 1 645 222 145 0 50 chrX 7934707 7934787 -14488040 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 1 645 235 204 0 0 chrX 7934915 7934964 -14487863 + (TGG)n Simple_repeat Simple_repeat 2 50 0 1 645 335 382 6 6 chrX 7935516 7935682 -14487145 + (CCG)n Simple_repeat Simple_repeat 2 167 0 1 645 236 364 5 49 chrX 7935609 7935701 -14487126 + (CTG)n Simple_repeat Simple_repeat 2 92 0 1 645 186 43 0 0 chrX 7935701 7935724 -14487103 + (CCG)n Simple_repeat Simple_repeat 2 24 0 1 645 236 364 5 49 chrX 7935724 7935816 -14487011 + (CTG)n Simple_repeat Simple_repeat 3 88 0 1 645 287 246 0 0 chrX 7936019 7936084 -14486743 + (CTG)n Simple_repeat Simple_repeat 3 67 0 1 645 203 234 0 0 chrX 7936561 7936608 -14486219 + (CTG)n Simple_repeat Simple_repeat 2 48 0 1 645 296 146 0 80 chrX 7936608 7936720 -14486107 - ROO_I LTR Pao -7513 743 641 1 645 192 185 0 0 chrX 7936720 7936774 -14486053 + (CTG)n Simple_repeat Simple_repeat 1 54 0 1 645 261 153 0 66 chrX 7937010 7937101 -14485726 - ROO_I LTR Pao -7513 743 659 1 645 23 33 0 0 chrX 7938825 7938855 -14483972 + AT_rich Low_complexity Low_complexity 1 30 0 1 645 210 243 6 31 chrX 7939307 7939413 -14483414 + T-rich Low_complexity Low_complexity 1 103 0 1 645 37 39 0 0 chrX 7939434 7939485 -14483342 + AT_rich Low_complexity Low_complexity 1 51 0 1 645 226 202 35 23 chrX 7940256 7940342 -14482485 + (TTTAA)n Simple_repeat Simple_repeat 4 90 0 1 645 47 53 0 0 chrX 7940389 7940464 -14482363 + AT_rich Low_complexity Low_complexity 1 75 0 1 645 26 50 0 0 chrX 7940501 7940541 -14482286 + AT_rich Low_complexity Low_complexity 1 40 0 1 645 185 65 32 0 chrX 7940541 7940572 -14482255 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 1 645 213 182 0 0 chrX 7940745 7940800 -14482027 + (CAGAGA)n Simple_repeat Simple_repeat 4 58 0 1 645 28 0 0 0 chrX 7941181 7941209 -14481618 + AT_rich Low_complexity Low_complexity 1 28 0 1 645 609 107 0 35 chrX 7942194 7942310 -14480517 + (TTGG)n Simple_repeat Simple_repeat 4 115 0 1 645 429 90 0 0 chrX 7942389 7942456 -14480371 + (TAA)n Simple_repeat Simple_repeat 3 69 0 1 645 285 75 0 0 chrX 7942659 7942699 -14480128 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 645 21 0 0 0 chrX 7943187 7943208 -14479619 + AT_rich Low_complexity Low_complexity 1 21 0 1 645 183 42 0 0 chrX 7943379 7943403 -14479424 + (GA)n Simple_repeat Simple_repeat 1 24 0 1 645 330 67 0 0 chrX 7944061 7944106 -14478721 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 645 210 250 0 0 chrX 7945292 7945364 -14477463 + T-rich Low_complexity Low_complexity 5 76 0 1 645 210 350 6 40 chrX 7945991 7946164 -14476663 + (CCG)n Simple_repeat Simple_repeat 2 168 0 1 645 200 143 42 52 chrX 7947367 7947463 -14475364 + (TTGG)n Simple_repeat Simple_repeat 1 95 0 1 645 273 98 0 0 chrX 7948423 7948464 -14474363 + (CCG)n Simple_repeat Simple_repeat 3 43 0 1 645 224 77 26 0 chrX 7949558 7949597 -14473230 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 645 21 0 0 0 chrX 7952409 7952430 -14470397 + AT_rich Low_complexity Low_complexity 1 21 0 1 645 26 30 0 0 chrX 7952467 7952500 -14470327 + AT_rich Low_complexity Low_complexity 1 33 0 1 645 21 0 0 0 chrX 7953454 7953475 -14469352 + AT_rich Low_complexity Low_complexity 1 21 0 1 645 26 0 0 0 chrX 7957738 7957764 -14465063 + AT_rich Low_complexity Low_complexity 1 26 0 1 645 26 30 0 0 chrX 7958911 7958944 -14463883 + AT_rich Low_complexity Low_complexity 1 33 0 1 645 240 35 0 0 chrX 7963096 7963125 -14459702 + (CCAA)n Simple_repeat Simple_repeat 3 31 0 1 645 198 143 0 0 chrX 7963241 7963276 -14459551 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 645 21 71 0 0 chrX 7964008 7964050 -14458777 + AT_rich Low_complexity Low_complexity 1 42 0 1 645 255 61 0 0 chrX 7964615 7964648 -14458179 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 645 261 98 0 0 chrX 7965149 7965190 -14457637 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 645 22 0 0 0 chrX 7973082 7973104 -14449723 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 21 57 0 0 chrX 7974036 7974071 -14448756 + AT_rich Low_complexity Low_complexity 1 35 0 1 645 237 108 0 0 chrX 7975519 7975556 -14447271 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 645 264 30 0 0 chrX 7975685 7975718 -14447109 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 645 200 281 0 0 chrX 7975871 7975928 -14446899 + (CAATC)n Simple_repeat Simple_repeat 1 57 0 1 645 23 33 0 0 chrX 7977124 7977154 -14445673 + AT_rich Low_complexity Low_complexity 1 30 0 1 645 465 148 0 0 chrX 7977588 7977669 -14445158 + (ACTG)n Simple_repeat Simple_repeat 2 82 0 1 645 27 49 0 0 chrX 7978048 7978089 -14444738 + AT_rich Low_complexity Low_complexity 1 41 0 1 645 267 114 0 0 chrX 7979164 7979208 -14443619 + (CCA)n Simple_repeat Simple_repeat 1 44 0 1 645 210 188 0 20 chrX 7981028 7981077 -14441750 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 645 216 97 0 0 chrX 7981167 7981198 -14441629 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1 645 204 97 0 0 chrX 7981479 7981510 -14441317 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 1 645 213 226 0 0 chrX 7981540 7981593 -14441234 + T-rich Low_complexity Low_complexity 1 53 0 1 645 234 62 0 0 chrX 7981683 7981715 -14441112 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 645 230 95 0 23 chrX 7981975 7982018 -14440809 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 645 21 0 0 0 chrX 7982058 7982079 -14440748 + AT_rich Low_complexity Low_complexity 1 21 0 1 645 203 103 0 25 chrX 7982821 7982861 -14439966 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 645 227 79 26 0 chrX 7983021 7983059 -14439768 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 645 279 54 0 0 chrX 7983135 7983172 -14439655 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 645 230 81 27 0 chrX 7983928 7983965 -14438862 + (ATTTG)n Simple_repeat Simple_repeat 2 39 0 1 645 22 0 0 0 chrX 7984382 7984404 -14438423 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 201 94 0 0 chrX 7985044 7985076 -14437751 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 645 23 33 0 0 chrX 7985213 7985243 -14437584 + AT_rich Low_complexity Low_complexity 1 30 0 1 645 234 143 0 0 chrX 7985372 7985421 -14437406 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 645 22 0 0 0 chrX 7985919 7985941 -14436886 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 21 36 0 0 chrX 7986434 7986462 -14436365 + AT_rich Low_complexity Low_complexity 1 28 0 1 645 216 67 0 0 chrX 7986705 7986735 -14436092 + (CAAAG)n Simple_repeat Simple_repeat 2 31 0 1 645 25 0 0 0 chrX 7988708 7988733 -14434094 + AT_rich Low_complexity Low_complexity 1 25 0 1 645 23 0 0 0 chrX 7989433 7989456 -14433371 + AT_rich Low_complexity Low_complexity 1 23 0 1 645 30 45 0 0 chrX 7994287 7994331 -14428496 + AT_rich Low_complexity Low_complexity 1 44 0 1 645 213 94 0 0 chrX 7994452 7994484 -14428343 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 645 214 220 20 0 chrX 7995143 7995193 -14427634 + (TTG)n Simple_repeat Simple_repeat 2 52 0 1 645 198 71 0 0 chrX 7995278 7995306 -14427521 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 646 219 114 0 0 chrX 7996785 7996820 -14426007 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 646 24 0 0 0 chrX 8000689 8000713 -14422114 + AT_rich Low_complexity Low_complexity 1 24 0 1 646 189 0 0 0 chrX 8002264 8002285 -14420542 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 646 500 241 0 0 chrX 8003153 8003290 -14419537 + (TATATG)n Simple_repeat Simple_repeat 4 140 0 1 646 225 222 12 24 chrX 8003719 8003802 -14419025 + (TATATG)n Simple_repeat Simple_repeat 6 87 0 1 646 203 175 0 0 chrX 8004826 8004866 -14417961 + T-rich Low_complexity Low_complexity 1 40 0 1 646 221 75 25 0 chrX 8006152 8006192 -14416635 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 646 201 108 0 0 chrX 8009949 8009986 -14412841 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 646 21 0 0 0 chrX 8010282 8010303 -14412524 + AT_rich Low_complexity Low_complexity 1 21 0 1 646 211 290 0 0 chrX 8018841 8018910 -14403917 + A-rich Low_complexity Low_complexity 1 69 0 1 646 201 132 0 0 chrX 8019009 8019047 -14403780 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1 646 40 0 0 0 chrX 8019391 8019431 -14403396 + AT_rich Low_complexity Low_complexity 1 40 0 1 646 216 97 0 0 chrX 8019900 8019931 -14402896 + (CGAGT)n Simple_repeat Simple_repeat 5 35 0 1 646 186 43 0 0 chrX 8021012 8021035 -14401792 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 646 300 27 0 0 chrX 8021448 8021485 -14401342 + (TGG)n Simple_repeat Simple_repeat 1 37 0 1 646 180 77 0 0 chrX 8022173 8022199 -14400628 + (CGATG)n Simple_repeat Simple_repeat 5 30 0 1 646 31 0 0 0 chrX 8023495 8023526 -14399301 + AT_rich Low_complexity Low_complexity 1 31 0 1 646 375 188 107 23 chrX 8023584 8023715 -14399112 - XDMR_DM Unknown Unknown -211 149 8 1 646 207 300 0 0 chrX 8024398 8024448 -14398379 + (CCG)n Simple_repeat Simple_repeat 2 51 0 1 646 21 0 0 0 chrX 8029011 8029032 -14393795 + AT_rich Low_complexity Low_complexity 1 21 0 1 646 195 42 0 0 chrX 8032399 8032423 -14390404 + (T)n Simple_repeat Simple_repeat 1 24 0 1 646 186 43 0 0 chrX 8034068 8034091 -14388736 + (CGA)n Simple_repeat Simple_repeat 2 24 0 1 646 260 271 0 0 chrX 8035209 8035268 -14387559 + (TTG)n Simple_repeat Simple_repeat 3 61 0 1 646 183 42 0 0 chrX 8035834 8035858 -14386969 + (CCGAG)n Simple_repeat Simple_repeat 4 27 0 1 646 189 121 0 0 chrX 8035868 8035901 -14386926 + (TGG)n Simple_repeat Simple_repeat 2 34 0 1 646 208 296 10 10 chrX 8035993 8036092 -14386735 + (CA)n Simple_repeat Simple_repeat 2 100 0 1 646 219 263 0 0 chrX 8037588 8037645 -14385182 + T-rich Low_complexity Low_complexity 1 57 0 1 646 1248 220 24 41 chrX 8046425 8046842 -14375985 + SAR_DM Satellite Satellite 472 881 -591 1 646 213 39 0 0 chrX 8047367 8047393 -14375434 + (GGA)n Simple_repeat Simple_repeat 2 27 0 1 646 30 27 0 0 chrX 8053590 8053627 -14369200 + AT_rich Low_complexity Low_complexity 1 37 0 1 646 23 33 0 0 chrX 8053931 8053961 -14368866 + AT_rich Low_complexity Low_complexity 1 30 0 1 646 25 0 0 0 chrX 8056981 8057006 -14365821 + AT_rich Low_complexity Low_complexity 1 25 0 1 646 246 105 0 0 chrX 8060213 8060251 -14362576 + (T)n Simple_repeat Simple_repeat 1 38 0 1 646 216 67 0 0 chrX 8060932 8060962 -14361865 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 646 192 152 0 0 chrX 8062046 8062079 -14360748 + (CTG)n Simple_repeat Simple_repeat 1 33 0 1 646 192 77 0 0 chrX 8063300 8063326 -14359501 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 646 180 125 0 0 chrX 8064433 8064465 -14358362 + (T)n Simple_repeat Simple_repeat 1 32 0 1 646 235 241 0 0 chrX 8064653 8064711 -14358116 + T-rich Low_complexity Low_complexity 1 58 0 1 646 210 231 0 0 chrX 8066335 8066387 -14356440 + CT-rich Low_complexity Low_complexity 3 54 0 1 646 258 125 0 0 chrX 8067076 8067124 -14355703 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 646 249 119 0 0 chrX 8067122 8067164 -14355663 + (TGG)n Simple_repeat Simple_repeat 1 42 0 1 646 228 184 0 0 chrX 8068441 8068490 -14354337 + (TAAAG)n Simple_repeat Simple_repeat 3 51 0 1 646 216 105 34 34 chrX 8068488 8068547 -14354280 + (CGAAA)n Simple_repeat Simple_repeat 4 62 0 1 646 261 57 0 0 chrX 8070272 8070307 -14352520 + (CTG)n Simple_repeat Simple_repeat 2 36 0 1 646 241 212 0 59 chrX 8070400 8070485 -14352342 + T-rich Low_complexity Low_complexity 3 82 0 1 646 192 200 0 0 chrX 8070692 8070742 -14352085 + (CAA)n Simple_repeat Simple_repeat 3 52 0 1 646 216 0 0 0 chrX 8071804 8071828 -14350999 + (CTG)n Simple_repeat Simple_repeat 2 25 0 1 646 375 160 0 0 chrX 8072738 8072813 -14350014 + (CAG)n Simple_repeat Simple_repeat 1 75 0 1 646 357 188 0 0 chrX 8073201 8073281 -14349546 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 646 33 56 0 0 chrX 8073438 8073492 -14349335 + AT_rich Low_complexity Low_complexity 1 54 0 1 646 290 263 0 0 chrX 8073940 8074016 -14348811 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 646 21 71 0 0 chrX 8074602 8074644 -14348183 + AT_rich Low_complexity Low_complexity 1 42 0 1 646 180 27 0 75 chrX 8074807 8074847 -14347980 + (CGCTG)n Simple_repeat Simple_repeat 5 41 0 1 646 264 175 0 0 chrX 8079471 8079534 -14343293 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 646 25 0 0 0 chrX 8080812 8080837 -14341990 + AT_rich Low_complexity Low_complexity 1 25 0 1 646 270 106 0 0 chrX 8081059 8081106 -14341721 + (TTC)n Simple_repeat Simple_repeat 2 48 0 1 646 231 36 0 0 chrX 8081195 8081223 -14341604 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 646 25 31 0 0 chrX 8081331 8081363 -14341464 + AT_rich Low_complexity Low_complexity 1 32 0 1 646 213 178 0 0 chrX 8081430 8081475 -14341352 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1 646 221 227 0 0 chrX 8081641 8081685 -14341142 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 646 26 0 0 0 chrX 8082380 8082406 -14340421 + AT_rich Low_complexity Low_complexity 1 26 0 1 646 200 224 0 20 chrX 8082468 8082518 -14340309 + A-rich Low_complexity Low_complexity 2 50 0 1 646 208 250 0 0 chrX 8083293 8083349 -14339478 + T-rich Low_complexity Low_complexity 1 56 0 1 646 195 42 0 0 chrX 8083420 8083444 -14339383 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 646 186 43 0 0 chrX 8084389 8084412 -14338415 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 646 216 0 0 0 chrX 8084673 8084697 -14338130 + (T)n Simple_repeat Simple_repeat 1 24 0 1 646 212 128 0 41 chrX 8086219 8086268 -14336559 + (TTAAA)n Simple_repeat Simple_repeat 4 50 0 1 646 29 0 0 0 chrX 8086834 8086863 -14335964 + AT_rich Low_complexity Low_complexity 1 29 0 1 646 257 89 22 0 chrX 8087493 8087538 -14335289 + (CAG)n Simple_repeat Simple_repeat 3 48 0 1 646 221 258 0 0 chrX 8088420 8088482 -14334345 + T-rich Low_complexity Low_complexity 1 62 0 1 646 214 179 0 0 chrX 8090067 8090106 -14332721 + GA-rich Low_complexity Low_complexity 1 39 0 1 646 24 32 0 0 chrX 8091604 8091635 -14331192 + AT_rich Low_complexity Low_complexity 1 31 0 1 646 183 80 0 0 chrX 8092230 8092255 -14330572 + (CATA)n Simple_repeat Simple_repeat 4 28 0 1 646 21 71 0 0 chrX 8094235 8094277 -14328550 + AT_rich Low_complexity Low_complexity 1 42 0 1 646 22 0 0 0 chrX 8095850 8095872 -14326955 + AT_rich Low_complexity Low_complexity 1 22 0 1 646 213 94 0 0 chrX 8096435 8096467 -14326360 + (T)n Simple_repeat Simple_repeat 1 32 0 1 646 397 277 0 0 chrX 8096611 8096741 -14326086 + (CA)n Simple_repeat Simple_repeat 1 130 0 1 646 210 118 0 0 chrX 8097669 8097703 -14325124 + (A)n Simple_repeat Simple_repeat 1 34 0 1 646 388 266 0 28 chrX 8099648 8099869 -14322958 + A-rich Low_complexity Low_complexity 1 214 0 1 646 524 171 0 0 chrX 8099745 8099856 -14322971 + (CATATA)n Simple_repeat Simple_repeat 6 116 0 1 646 204 40 0 0 chrX 8101755 8101780 -14321047 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 646 24 0 0 0 chrX 8101876 8101900 -14320927 + AT_rich Low_complexity Low_complexity 1 24 0 1 646 212 170 0 19 chrX 8103263 8103317 -14319510 + (CAG)n Simple_repeat Simple_repeat 3 55 0 1 646 300 91 0 0 chrX 8103557 8103601 -14319226 + (CAG)n Simple_repeat Simple_repeat 3 46 0 1 646 247 111 0 256 chrX 8104511 8104632 -14318195 + ROO_I LTR Pao 640 729 -7527 1 646 205 274 0 0 chrX 8104990 8105041 -14317786 + T-rich Low_complexity Low_complexity 2 52 0 1 646 213 154 0 0 chrX 8105128 8105167 -14317660 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 646 234 62 0 0 chrX 8106173 8106205 -14316622 + (ATG)n Simple_repeat Simple_repeat 1 32 0 1 646 222 233 0 0 chrX 8106536 8106579 -14316248 + (CATA)n Simple_repeat Simple_repeat 3 45 0 1 646 224 214 0 0 chrX 8107948 8107990 -14314837 + (CATA)n Simple_repeat Simple_repeat 2 43 0 1 646 189 0 0 0 chrX 8108003 8108024 -14314803 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 646 219 114 0 0 chrX 8108143 8108178 -14314649 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 646 186 143 0 0 chrX 8112838 8112873 -14309954 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 646 255 93 0 0 chrX 8115521 8115564 -14307263 + (AATTG)n Simple_repeat Simple_repeat 3 45 0 1 646 278 100 0 39 chrX 8115809 8115861 -14306966 + (CTG)n Simple_repeat Simple_repeat 3 52 0 1 646 189 74 0 0 chrX 8116716 8116743 -14306084 + (ATGGTG)n Simple_repeat Simple_repeat 3 29 0 1 646 267 79 0 0 chrX 8116834 8116872 -14305955 + (GGTTG)n Simple_repeat Simple_repeat 4 41 0 1 646 230 172 47 0 chrX 8117758 8117822 -14305005 + ROO_I LTR Pao 639 705 -7551 1 646 188 56 0 77 chrX 8118750 8118789 -14304038 + (CCA)n Simple_repeat Simple_repeat 3 38 0 1 646 183 42 0 0 chrX 8118831 8118855 -14303972 + (CCA)n Simple_repeat Simple_repeat 3 26 0 1 646 245 100 0 20 chrX 8118929 8118980 -14303847 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 646 201 266 0 15 chrX 8119082 8119147 -14303680 + (CAA)n Simple_repeat Simple_repeat 2 65 0 1 646 249 83 0 0 chrX 8119247 8119283 -14303544 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 646 295 222 0 44 chrX 8119419 8119532 -14303295 + ROO_I LTR Pao 634 741 -7515 1 646 306 198 23 23 chrX 8119588 8119676 -14303151 + (CAG)n Simple_repeat Simple_repeat 2 89 0 1 646 237 83 0 0 chrX 8120005 8120041 -14302786 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 646 195 42 0 0 chrX 8120181 8120205 -14302622 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 646 198 103 0 0 chrX 8120774 8120803 -14302024 + (TATG)n Simple_repeat Simple_repeat 3 31 0 1 646 357 62 0 0 chrX 8120985 8121033 -14301794 + (CCAA)n Simple_repeat Simple_repeat 4 51 0 1 646 225 65 0 0 chrX 8121135 8121166 -14301661 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 646 336 138 0 0 chrX 8121775 8121840 -14300987 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 646 246 203 15 30 chrX 8124435 8124501 -14298326 + (CTCG)n Simple_repeat Simple_repeat 2 66 0 1 646 239 140 20 0 chrX 8124933 8124983 -14297844 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 646 200 213 0 0 chrX 8125834 8125881 -14296946 + T-rich Low_complexity Low_complexity 1 47 0 1 646 297 118 0 0 chrX 8126221 8126272 -14296555 + (CAG)n Simple_repeat Simple_repeat 3 53 0 1 646 243 0 0 0 chrX 8126381 8126408 -14296419 + (CTG)n Simple_repeat Simple_repeat 3 29 0 1 647 246 116 0 0 chrX 8126656 8126699 -14296128 + (CAG)n Simple_repeat Simple_repeat 3 45 0 1 647 222 118 0 0 chrX 8128603 8128637 -14294190 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 647 31 0 0 0 chrX 8132667 8132698 -14290129 + AT_rich Low_complexity Low_complexity 1 31 0 1 647 180 158 0 0 chrX 8133460 8133498 -14289329 + A-rich Low_complexity Low_complexity 1 38 0 1 647 199 93 0 44 chrX 8133704 8133749 -14289078 + (CAAAAA)n Simple_repeat Simple_repeat 4 46 0 1 647 24 0 0 0 chrX 8134465 8134489 -14288338 + AT_rich Low_complexity Low_complexity 1 24 0 1 647 200 211 0 0 chrX 8138130 8138168 -14284659 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1 647 180 0 0 0 chrX 8139058 8139078 -14283749 + (ATG)n Simple_repeat Simple_repeat 2 21 0 1 647 200 135 27 0 chrX 8146941 8146978 -14275849 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 647 206 121 0 0 chrX 8147051 8147084 -14275743 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1 647 21 57 0 0 chrX 8148638 8148673 -14274154 + AT_rich Low_complexity Low_complexity 1 35 0 1 647 225 94 0 0 chrX 8148826 8148858 -14273969 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 647 220 328 0 0 chrX 8149317 8149433 -14273394 + T-rich Low_complexity Low_complexity 1 116 0 1 647 216 135 0 0 chrX 8150127 8150164 -14272663 + (CATTT)n Simple_repeat Simple_repeat 4 40 0 1 647 1688 239 73 43 chrX 8150259 8150791 -14272036 + SAR_DM Satellite Satellite 1 833 -434 1 647 2241 130 0 0 chrX 8150791 8151152 -14271675 - XDMR Unknown Unknown 0 361 1 1 647 1688 239 73 43 chrX 8151152 8151308 -14271519 + SAR_DM Satellite Satellite 834 1080 -187 1 647 249 246 0 0 chrX 8151594 8151655 -14271172 + (TTGGGG)n Simple_repeat Simple_repeat 5 65 0 1 647 23 0 0 0 chrX 8152436 8152459 -14270368 + AT_rich Low_complexity Low_complexity 1 23 0 1 647 25 31 0 0 chrX 8153222 8153254 -14269573 + AT_rich Low_complexity Low_complexity 1 32 0 1 647 21 0 0 0 chrX 8153642 8153663 -14269164 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 203 262 0 16 chrX 8154851 8154913 -14267914 + (TTG)n Simple_repeat Simple_repeat 3 63 0 1 647 228 67 0 0 chrX 8156318 8156348 -14266479 + (CAGC)n Simple_repeat Simple_repeat 2 31 0 1 647 21 0 0 0 chrX 8156576 8156597 -14266230 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 224 30 30 0 chrX 8157702 8157735 -14265092 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 647 286 282 0 0 chrX 8160136 8160221 -14262606 + GA-rich Low_complexity Low_complexity 4 88 0 1 647 1596 135 22 3 chrX 8160997 8161331 -14261496 + XDMR_DM Unknown Unknown 23 361 0 1 647 1296 244 12 17 chrX 8161056 8161464 -14261363 - SAR_DM Satellite Satellite -514 958 553 1 647 24 0 0 0 chrX 8161551 8161575 -14261252 + AT_rich Low_complexity Low_complexity 1 24 0 1 647 28 71 0 0 chrX 8162757 8162813 -14260014 + AT_rich Low_complexity Low_complexity 1 56 0 1 647 33 25 0 0 chrX 8165819 8165859 -14256968 + AT_rich Low_complexity Low_complexity 1 40 0 1 647 26 0 0 0 chrX 8165922 8165948 -14256879 + AT_rich Low_complexity Low_complexity 1 26 0 1 647 186 43 0 0 chrX 8170214 8170237 -14252590 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 647 23 0 0 0 chrX 8170493 8170516 -14252311 + AT_rich Low_complexity Low_complexity 1 23 0 1 647 226 276 29 36 chrX 8171322 8171461 -14251366 + T-rich Low_complexity Low_complexity 4 141 0 1 647 198 128 0 0 chrX 8171772 8171811 -14251016 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 647 24 32 0 0 chrX 8174858 8174889 -14247938 + AT_rich Low_complexity Low_complexity 1 31 0 1 647 182 119 0 45 chrX 8175451 8175495 -14247332 + A-rich Low_complexity Low_complexity 1 42 0 1 647 235 146 0 35 chrX 8175815 8175872 -14246955 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 647 228 182 18 0 chrX 8176385 8176440 -14246387 + T-rich Low_complexity Low_complexity 3 58 0 1 647 225 108 0 0 chrX 8176804 8176841 -14245986 + (T)n Simple_repeat Simple_repeat 1 37 0 1 647 201 121 0 0 chrX 8178669 8178702 -14244125 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 647 301 200 0 59 chrX 8179247 8179417 -14243410 + (CTG)n Simple_repeat Simple_repeat 1 160 0 1 647 230 230 53 9 chrX 8180528 8180642 -14242185 + (TA)n Simple_repeat Simple_repeat 2 120 0 1 647 22 70 0 0 chrX 8181267 8181310 -14241517 + AT_rich Low_complexity Low_complexity 1 43 0 1 647 245 237 17 0 chrX 8181808 8181867 -14240960 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 647 21 36 0 0 chrX 8182513 8182541 -14240286 + AT_rich Low_complexity Low_complexity 1 28 0 1 647 215 156 0 22 chrX 8183115 8183161 -14239666 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 647 234 116 0 0 chrX 8183237 8183280 -14239547 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 647 285 135 0 0 chrX 8184479 8184531 -14238296 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 647 223 195 0 0 chrX 8185334 8185375 -14237452 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 647 301 253 0 0 chrX 8187139 8187218 -14235609 + A-rich Low_complexity Low_complexity 1 79 0 1 647 27571 1 12 0 chrX 8187335 8190316 -14232511 + HOBO DNA hAT 1 3016 0 1 647 855 245 16 12 chrX 8190594 8190611 -14232216 - SAR_DM Satellite Satellite -594 878 826 1 647 951 144 11 17 chrX 8190611 8190787 -14232040 + XDMR_DM Unknown Unknown 186 360 0 1 647 855 245 16 12 chrX 8190787 8190846 -14231981 - SAR_DM Satellite Satellite -594 825 626 1 647 218 258 0 0 chrX 8192765 8192827 -14230000 + GA-rich Low_complexity Low_complexity 3 64 0 1 647 192 214 0 0 chrX 8193183 8193239 -14229588 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 647 186 71 0 0 chrX 8195271 8195299 -14227528 + (T)n Simple_repeat Simple_repeat 1 28 0 1 647 234 136 0 0 chrX 8195537 8195581 -14227246 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 647 206 321 18 9 chrX 8195694 8195804 -14227023 + (TTGG)n Simple_repeat Simple_repeat 4 114 0 1 647 37 23 0 0 chrX 8196833 8196877 -14225950 + AT_rich Low_complexity Low_complexity 1 44 0 1 647 282 29 0 0 chrX 8198605 8198640 -14224187 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 647 306 138 0 0 chrX 8199838 8199896 -14222931 + (TCTG)n Simple_repeat Simple_repeat 2 59 0 1 647 23 0 0 0 chrX 8200954 8200977 -14221850 + AT_rich Low_complexity Low_complexity 1 23 0 1 647 201 162 0 0 chrX 8204007 8204044 -14218783 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 647 279 104 0 0 chrX 8204224 8204272 -14218555 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 647 207 0 0 0 chrX 8205774 8205797 -14217030 + (A)n Simple_repeat Simple_repeat 1 23 0 1 647 1064 129 41 0 chrX 8206880 8207050 -14215777 - DNAREP1_DM LINE Penelope 0 594 418 1 647 958 100 7 7 chrX 8207054 8207205 -14215622 - DNAREP1_DM LINE Penelope -443 151 1 1 647 210 118 0 0 chrX 8207966 8208000 -14214827 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 647 21 36 0 0 chrX 8208569 8208597 -14214230 + AT_rich Low_complexity Low_complexity 1 28 0 1 647 203 122 49 0 chrX 8209637 8209678 -14213149 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 647 180 0 0 0 chrX 8209729 8209749 -14213078 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 647 225 210 0 0 chrX 8209847 8209909 -14212918 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 647 222 62 0 0 chrX 8210680 8210712 -14212115 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 647 1351 288 39 23 chrX 8211900 8212105 -14210722 - SAR_DM Satellite Satellite -553 661 216 1 647 1969 158 3 0 chrX 8212105 8212454 -14210373 + XDMR Unknown Unknown 1 350 -11 1 647 1351 288 39 23 chrX 8212454 8212551 -14210276 - SAR_DM Satellite Satellite -553 215 1 1 647 213 65 0 0 chrX 8214884 8214915 -14207912 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 647 210 71 0 0 chrX 8215159 8215187 -14207640 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 647 33 25 0 0 chrX 8215695 8215735 -14207092 + AT_rich Low_complexity Low_complexity 1 40 0 1 647 324 111 0 0 chrX 8217806 8217860 -14204967 + (GAAAA)n Simple_repeat Simple_repeat 2 55 0 1 647 203 138 0 0 chrX 8220046 8220075 -14202752 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 647 183 42 0 0 chrX 8220560 8220584 -14202243 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 647 321 149 0 0 chrX 8220707 8220774 -14202053 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 647 240 284 0 0 chrX 8221822 8221896 -14200931 + A-rich Low_complexity Low_complexity 1 74 0 1 647 235 326 0 0 chrX 8222036 8222128 -14200699 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 647 207 139 0 0 chrX 8223292 8223328 -14199499 + (TATG)n Simple_repeat Simple_repeat 1 36 0 1 647 273 75 0 0 chrX 8223507 8223547 -14199280 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 647 241 68 45 0 chrX 8224675 8224719 -14198108 + (TTTTTG)n Simple_repeat Simple_repeat 1 46 0 1 647 198 0 0 0 chrX 8226101 8226123 -14196704 + (CGATG)n Simple_repeat Simple_repeat 5 26 0 1 647 223 245 0 0 chrX 8227126 8227175 -14195652 + (AGATG)n Simple_repeat Simple_repeat 3 51 0 1 647 21 36 0 0 chrX 8230898 8230926 -14191901 + GC_rich Low_complexity Low_complexity 1 28 0 1 647 219 139 0 0 chrX 8231567 8231603 -14191224 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 647 201 108 0 0 chrX 8232006 8232043 -14190784 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 647 1374 261 50 34 chrX 8232821 8233523 -14189304 + SAR_DM Satellite Satellite 206 918 -554 1 647 21 0 0 0 chrX 8235284 8235305 -14187522 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 232 258 0 0 chrX 8235786 8235852 -14186975 + T-rich Low_complexity Low_complexity 1 66 0 1 647 288 189 0 0 chrX 8237046 8237120 -14185707 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 647 246 105 0 0 chrX 8237436 8237474 -14185353 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 647 204 40 0 0 chrX 8237637 8237662 -14185165 + (TTTCG)n Simple_repeat Simple_repeat 3 27 0 1 647 228 67 0 0 chrX 8237758 8237788 -14185039 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 647 180 0 0 0 chrX 8238894 8238914 -14183913 + (TTAAA)n Simple_repeat Simple_repeat 4 23 0 1 647 21 0 0 0 chrX 8239415 8239436 -14183391 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 277 94 0 54 chrX 8239507 8239563 -14183264 + (TATG)n Simple_repeat Simple_repeat 4 56 0 1 647 204 167 0 0 chrX 8241072 8241120 -14181707 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 647 279 150 0 0 chrX 8241257 8241317 -14181510 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 647 21 71 0 0 chrX 8241494 8241536 -14181291 + AT_rich Low_complexity Low_complexity 1 42 0 1 647 183 42 0 0 chrX 8241872 8241896 -14180931 + (T)n Simple_repeat Simple_repeat 1 24 0 1 647 250 220 0 0 chrX 8242931 8242981 -14179846 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 647 210 239 0 0 chrX 8243113 8243184 -14179643 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 647 31 26 0 0 chrX 8243433 8243471 -14179356 + AT_rich Low_complexity Low_complexity 1 38 0 1 647 21 0 0 0 chrX 8244781 8244802 -14178025 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 186 191 0 0 chrX 8246819 8246861 -14175966 + T-rich Low_complexity Low_complexity 1 42 0 1 647 24 0 0 0 chrX 8247011 8247035 -14175792 + AT_rich Low_complexity Low_complexity 1 24 0 1 647 21 0 0 0 chrX 8248657 8248678 -14174149 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 339 113 0 0 chrX 8250361 8250414 -14172413 + (CAA)n Simple_repeat Simple_repeat 2 54 0 1 647 258 143 0 0 chrX 8250468 8250517 -14172310 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1 647 22 0 0 0 chrX 8250929 8250951 -14171876 + AT_rich Low_complexity Low_complexity 1 22 0 1 647 189 121 0 0 chrX 8251270 8251303 -14171524 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 647 24 0 0 0 chrX 8252147 8252171 -14170656 + AT_rich Low_complexity Low_complexity 1 24 0 1 647 189 0 0 0 chrX 8252494 8252515 -14170312 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 647 270 125 0 0 chrX 8253309 8253357 -14169470 + (CATCT)n Simple_repeat Simple_repeat 4 51 0 1 647 215 246 49 0 chrX 8253424 8253485 -14169342 + CT-rich Low_complexity Low_complexity 3 66 0 1 647 212 59 29 0 chrX 8254263 8254297 -14168530 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 647 22 0 0 0 chrX 8254540 8254562 -14168265 + AT_rich Low_complexity Low_complexity 1 22 0 1 647 237 119 0 0 chrX 8254901 8254943 -14167884 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 647 36 23 0 0 chrX 8255146 8255189 -14167638 + AT_rich Low_complexity Low_complexity 1 43 0 1 647 29 0 0 0 chrX 8255436 8255465 -14167362 + AT_rich Low_complexity Low_complexity 1 29 0 1 647 213 179 17 51 chrX 8255772 8255831 -14166996 + T-rich Low_complexity Low_complexity 3 59 0 1 647 189 0 0 0 chrX 8256027 8256048 -14166779 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 647 225 94 0 0 chrX 8256192 8256224 -14166603 + (TTCG)n Simple_repeat Simple_repeat 3 34 0 1 647 438 20 0 0 chrX 8257136 8257187 -14165640 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 1 648 222 91 0 0 chrX 8258628 8258661 -14164166 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 648 2730 6 0 12 chrX 8258937 8259264 -14163563 + BS LINE Jockey 4804 5126 0 1 648 219 351 11 0 chrX 8260286 8260380 -14162447 + CT-rich Low_complexity Low_complexity 1 95 0 1 648 204 40 0 0 chrX 8260504 8260529 -14162298 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 648 22 35 0 0 chrX 8260694 8260723 -14162104 + AT_rich Low_complexity Low_complexity 1 29 0 1 648 199 203 17 17 chrX 8260983 8261043 -14161784 + (CAA)n Simple_repeat Simple_repeat 1 60 0 1 648 22 35 0 0 chrX 8261649 8261678 -14161149 + AT_rich Low_complexity Low_complexity 1 29 0 1 648 243 146 0 0 chrX 8262104 8262145 -14160682 + (CATA)n Simple_repeat Simple_repeat 1 41 0 1 648 201 147 0 0 chrX 8262724 8262758 -14160069 + (TTGGGG)n Simple_repeat Simple_repeat 3 36 0 1 648 1739 224 40 31 chrX 8263119 8263316 -14159511 - SAR_DM Satellite Satellite -553 919 490 1 648 1991 144 0 0 chrX 8263316 8263677 -14159150 + XDMR Unknown Unknown 1 361 0 1 648 876 119 53 18 chrX 8263677 8263848 -14158979 + XDMR Unknown Unknown 1 177 -184 1 648 1739 224 40 31 chrX 8263677 8263786 -14159041 - SAR_DM Satellite Satellite -553 489 247 1 648 328 203 0 0 chrX 8263867 8263941 -14158886 + XDMR_DM Unknown Unknown 193 266 -94 1 648 431 35 0 17 chrX 8266114 8266172 -14156655 + (CATA)n Simple_repeat Simple_repeat 4 60 0 1 648 228 293 0 0 chrX 8266487 8266569 -14156258 + T-rich Low_complexity Low_complexity 1 82 0 1 648 192 135 0 0 chrX 8266946 8266983 -14155844 + (TTCCG)n Simple_repeat Simple_repeat 2 38 0 1 648 231 239 14 29 chrX 8267355 8267424 -14155403 + A-rich Low_complexity Low_complexity 2 69 0 1 648 28 0 0 0 chrX 8267856 8267884 -14154943 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 29 28 0 0 chrX 8267922 8267958 -14154869 + AT_rich Low_complexity Low_complexity 1 36 0 1 648 207 0 0 0 chrX 8268090 8268113 -14154714 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 648 27 0 0 0 chrX 8268800 8268827 -14154000 + AT_rich Low_complexity Low_complexity 1 27 0 1 648 237 33 0 0 chrX 8270720 8270750 -14152077 + (CAT)n Simple_repeat Simple_repeat 3 32 0 1 648 231 157 0 0 chrX 8270807 8270858 -14151969 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 648 243 0 0 0 chrX 8271516 8271543 -14151284 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 648 240 35 0 0 chrX 8272861 8272890 -14149937 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 648 210 265 0 0 chrX 8274409 8274458 -14148369 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1 648 28 61 0 0 chrX 8275285 8275334 -14147493 + AT_rich Low_complexity Low_complexity 1 49 0 1 648 250 250 0 0 chrX 8276623 8276691 -14146136 + A-rich Low_complexity Low_complexity 1 68 0 1 648 23 54 0 0 chrX 8276788 8276825 -14146002 + AT_rich Low_complexity Low_complexity 1 37 0 1 648 230 258 0 0 chrX 8277997 8278059 -14144768 + A-rich Low_complexity Low_complexity 1 62 0 1 648 210 222 0 36 chrX 8278286 8278342 -14144485 + A-rich Low_complexity Low_complexity 1 54 0 1 648 289 222 0 0 chrX 8284865 8284919 -14137908 + DNAREP1_DM LINE Penelope 1 54 -540 1 648 34 24 0 0 chrX 8285506 8285547 -14137280 + AT_rich Low_complexity Low_complexity 1 41 0 1 648 183 146 0 0 chrX 8287473 8287514 -14135313 + (T)n Simple_repeat Simple_repeat 1 41 0 1 648 222 128 0 0 chrX 8287673 8287712 -14135115 + (ATG)n Simple_repeat Simple_repeat 2 40 0 1 648 294 169 0 0 chrX 8287770 8287835 -14134992 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 648 28 29 0 0 chrX 8287962 8287997 -14134830 + AT_rich Low_complexity Low_complexity 1 35 0 1 648 1415 251 65 38 chrX 8288176 8288842 -14133985 + SAR_DM Satellite Satellite 210 893 -579 1 648 183 80 0 0 chrX 8289141 8289166 -14133661 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 648 219 114 0 0 chrX 8289453 8289488 -14133339 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 648 25 0 0 0 chrX 8289540 8289565 -14133262 + AT_rich Low_complexity Low_complexity 1 25 0 1 648 205 203 0 48 chrX 8289757 8289819 -14133008 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 1 648 272 91 23 0 chrX 8291024 8291068 -14131759 + (TATG)n Simple_repeat Simple_repeat 4 48 0 1 648 180 77 0 0 chrX 8292489 8292515 -14130312 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 648 21 36 0 0 chrX 8292593 8292621 -14130206 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 215 224 0 0 chrX 8293205 8293254 -14129573 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 648 216 111 0 0 chrX 8293268 8293304 -14129523 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 648 286 206 0 36 chrX 8293456 8293567 -14129260 + ROO_I LTR Pao 643 749 -7507 1 648 378 189 27 9 chrX 8294409 8294521 -14128306 + ROO_I LTR Pao 625 738 -7518 1 648 195 42 0 0 chrX 8294574 8294598 -14128229 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 648 248 212 0 43 chrX 8295028 8295097 -14127730 + (CAG)n Simple_repeat Simple_repeat 1 66 0 1 648 258 156 0 0 chrX 8296174 8296219 -14126608 + (CAG)n Simple_repeat Simple_repeat 1 45 0 1 648 27 29 0 0 chrX 8297493 8297527 -14125300 + AT_rich Low_complexity Low_complexity 1 34 0 1 648 180 97 0 0 chrX 8298888 8298919 -14123908 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 648 195 65 43 21 chrX 8301074 8301121 -14121706 + (TTTTA)n Simple_repeat Simple_repeat 3 50 0 1 648 225 132 0 0 chrX 8303708 8303746 -14119081 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 648 240 274 24 0 chrX 8303799 8303883 -14118944 + ROO_I LTR Pao 678 763 -7493 1 648 240 0 0 0 chrX 8306309 8306336 -14116491 + BARI1 DNA Tc1 40 66 -1684 1 648 237 132 0 0 chrX 8307837 8307875 -14114952 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 648 208 125 0 48 chrX 8308333 8308375 -14114452 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 1 648 215 179 36 0 chrX 8308813 8308869 -14113958 + (TATG)n Simple_repeat Simple_repeat 2 59 0 1 648 183 156 0 0 chrX 8309096 8309128 -14113699 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1 648 211 307 0 26 chrX 8309239 8309316 -14113511 + (CATATA)n Simple_repeat Simple_repeat 5 79 0 1 648 270 81 0 0 chrX 8310848 8310885 -14111942 + (CATA)n Simple_repeat Simple_repeat 3 39 0 1 648 375 41 0 0 chrX 8311314 8311363 -14111464 + (A)n Simple_repeat Simple_repeat 1 49 0 1 648 21 36 0 0 chrX 8311621 8311649 -14111178 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 21 36 0 0 chrX 8313280 8313308 -14109519 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 28 0 0 0 chrX 8313518 8313546 -14109281 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 205 216 0 0 chrX 8314139 8314176 -14108651 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 648 191 36 0 35 chrX 8315311 8315340 -14107487 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 648 195 129 0 0 chrX 8315403 8315434 -14107393 + (CACG)n Simple_repeat Simple_repeat 4 34 0 1 648 269 381 0 0 chrX 8320463 8320636 -14102191 + (CAG)n Simple_repeat Simple_repeat 2 174 0 1 648 231 125 0 0 chrX 8323027 8323067 -14099760 + (CAG)n Simple_repeat Simple_repeat 3 42 0 1 648 22 0 0 0 chrX 8324135 8324157 -14098670 + AT_rich Low_complexity Low_complexity 1 22 0 1 648 180 0 0 0 chrX 8324405 8324425 -14098402 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 648 249 196 0 0 chrX 8324527 8324583 -14098244 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 648 300 91 0 0 chrX 8324598 8324642 -14098185 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 648 186 71 0 0 chrX 8325087 8325115 -14097712 + (T)n Simple_repeat Simple_repeat 1 28 0 1 648 251 277 0 15 chrX 8325750 8325816 -14097011 + (CAGA)n Simple_repeat Simple_repeat 4 68 0 1 648 186 143 0 0 chrX 8326152 8326187 -14096640 + (A)n Simple_repeat Simple_repeat 1 35 0 1 648 383 53 53 0 chrX 8334829 8334904 -14087923 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 648 23 54 0 0 chrX 8334904 8334941 -14087886 + AT_rich Low_complexity Low_complexity 1 37 0 1 648 816 262 68 36 chrX 8336470 8336910 -14085917 - SAR_DM Satellite Satellite -594 878 425 1 648 314 271 13 71 chrX 8336935 8337090 -14085737 + XDMR Unknown Unknown 44 189 -172 1 648 198 0 0 0 chrX 8337515 8337537 -14085290 + (CATTT)n Simple_repeat Simple_repeat 1 22 0 1 648 231 36 0 0 chrX 8338636 8338664 -14084163 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 648 207 0 0 0 chrX 8338709 8338732 -14084095 + (CAA)n Simple_repeat Simple_repeat 3 25 0 1 648 29 60 0 0 chrX 8338948 8338998 -14083829 + AT_rich Low_complexity Low_complexity 1 50 0 1 648 207 100 0 0 chrX 8339538 8339568 -14083259 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1 648 21 36 0 0 chrX 8339871 8339899 -14082928 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 23 33 0 0 chrX 8340205 8340235 -14082592 + AT_rich Low_complexity Low_complexity 1 30 0 1 648 25 65 0 0 chrX 8340661 8340707 -14082120 + AT_rich Low_complexity Low_complexity 1 46 0 1 648 183 100 0 0 chrX 8341218 8341248 -14081579 + (T)n Simple_repeat Simple_repeat 1 30 0 1 648 279 0 0 0 chrX 8341606 8341637 -14081190 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 648 34 24 0 0 chrX 8341692 8341733 -14081094 + AT_rich Low_complexity Low_complexity 1 41 0 1 648 219 152 0 0 chrX 8342612 8342658 -14080169 + (CTG)n Simple_repeat Simple_repeat 3 48 0 1 648 243 203 0 0 chrX 8342833 8342897 -14079930 + (CTG)n Simple_repeat Simple_repeat 2 65 0 1 648 198 103 0 0 chrX 8342976 8343005 -14079822 + (CTG)n Simple_repeat Simple_repeat 2 30 0 1 648 486 75 0 0 chrX 8343067 8343134 -14079693 + (CTG)n Simple_repeat Simple_repeat 2 68 0 1 648 23 33 0 0 chrX 8343213 8343243 -14079584 + AT_rich Low_complexity Low_complexity 1 30 0 1 648 219 303 0 0 chrX 8343570 8343646 -14079181 + (CACCAT)n Simple_repeat Simple_repeat 3 78 0 1 648 24 32 0 0 chrX 8343883 8343914 -14078913 + AT_rich Low_complexity Low_complexity 1 31 0 1 648 25 0 0 0 chrX 8344088 8344113 -14078714 + AT_rich Low_complexity Low_complexity 1 25 0 1 648 198 128 0 0 chrX 8344320 8344359 -14078468 + (A)n Simple_repeat Simple_repeat 1 39 0 1 648 26 0 0 0 chrX 8344789 8344815 -14078012 + AT_rich Low_complexity Low_complexity 1 26 0 1 648 21 71 0 0 chrX 8345079 8345121 -14077706 + AT_rich Low_complexity Low_complexity 1 42 0 1 648 351 78 0 0 chrX 8345320 8345371 -14077456 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1 648 195 42 0 0 chrX 8346129 8346153 -14076674 + (CGA)n Simple_repeat Simple_repeat 2 25 0 1 648 266 358 0 0 chrX 8346329 8346449 -14076378 + (TTAGGG)n Simple_repeat Simple_repeat 2 121 0 1 648 23 0 0 0 chrX 8346743 8346766 -14076061 + AT_rich Low_complexity Low_complexity 1 23 0 1 648 222 105 0 0 chrX 8347130 8347168 -14075659 + (GTATG)n Simple_repeat Simple_repeat 1 38 0 1 648 194 0 0 37 chrX 8348346 8348373 -14074454 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 648 276 30 0 0 chrX 8348521 8348554 -14074273 + (CTCA)n Simple_repeat Simple_repeat 3 35 0 1 648 206 118 0 0 chrX 8348727 8348761 -14074066 + (T)n Simple_repeat Simple_repeat 1 34 0 1 648 243 61 0 0 chrX 8349022 8349055 -14073772 + (CTG)n Simple_repeat Simple_repeat 1 33 0 1 648 390 100 0 0 chrX 8349208 8349268 -14073559 + (TCC)n Simple_repeat Simple_repeat 3 62 0 1 648 24 0 0 0 chrX 8350836 8350860 -14071967 + AT_rich Low_complexity Low_complexity 1 24 0 1 648 291 28 0 0 chrX 8351608 8351644 -14071183 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 648 1361 103 137 4 chrX 8353851 8354113 -14068714 - FB4_DM DNA Tc1 -1312 2777 2481 1 648 246 86 0 0 chrX 8354101 8354136 -14068691 - FB4_DM DNA Tc1 -1882 2207 2173 1 648 2112 108 15 18 chrX 8354139 8354479 -14068348 - FB4_DM DNA Tc1 -2645 1444 1106 1 648 21 0 0 0 chrX 8354711 8354732 -14068095 + AT_rich Low_complexity Low_complexity 1 21 0 1 648 24 0 0 0 chrX 8359581 8359605 -14063222 + AT_rich Low_complexity Low_complexity 1 24 0 1 648 21 0 0 0 chrX 8359746 8359767 -14063060 + AT_rich Low_complexity Low_complexity 1 21 0 1 648 237 33 0 0 chrX 8360360 8360390 -14062437 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 648 366 175 24 24 chrX 8360632 8360714 -14062113 + BS2 LINE Jockey 859 940 -3781 1 648 195 42 0 0 chrX 8360714 8360738 -14062089 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 648 195 42 0 0 chrX 8361457 8361481 -14061346 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 648 24 53 0 0 chrX 8364288 8364326 -14058501 + AT_rich Low_complexity Low_complexity 1 38 0 1 648 214 174 0 0 chrX 8366696 8366742 -14056085 + GA-rich Low_complexity Low_complexity 3 48 0 1 648 204 222 0 0 chrX 8369603 8369675 -14053152 + A-rich Low_complexity Low_complexity 1 72 0 1 648 198 0 0 0 chrX 8369853 8369875 -14052952 + (CAACC)n Simple_repeat Simple_repeat 1 22 0 1 648 234 91 0 0 chrX 8369954 8369987 -14052840 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 648 243 61 0 0 chrX 8370951 8370984 -14051843 + (T)n Simple_repeat Simple_repeat 1 33 0 1 648 201 286 0 0 chrX 8371849 8371926 -14050901 + (CAA)n Simple_repeat Simple_repeat 1 77 0 1 648 237 131 56 28 chrX 8372272 8372343 -14050484 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 648 46 33 0 0 chrX 8372354 8372414 -14050413 + AT_rich Low_complexity Low_complexity 1 60 0 1 648 21 36 0 0 chrX 8374378 8374406 -14048421 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 441 0 0 0 chrX 8375325 8375374 -14047453 + (CAATA)n Simple_repeat Simple_repeat 2 50 0 1 648 21 36 0 0 chrX 8377197 8377225 -14045602 + AT_rich Low_complexity Low_complexity 1 28 0 1 648 261 57 0 0 chrX 8379133 8379168 -14043659 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 648 23 33 0 0 chrX 8382579 8382609 -14040218 + AT_rich Low_complexity Low_complexity 1 30 0 1 648 23 54 0 0 chrX 8383268 8383305 -14039522 + AT_rich Low_complexity Low_complexity 1 37 0 1 648 23 68 0 0 chrX 8383442 8383486 -14039341 + AT_rich Low_complexity Low_complexity 1 44 0 1 648 214 154 29 44 chrX 8384071 8384139 -14038688 + T-rich Low_complexity Low_complexity 5 71 0 1 648 24 0 0 0 chrX 8386342 8386366 -14036461 + AT_rich Low_complexity Low_complexity 1 24 0 1 648 201 279 15 0 chrX 8386483 8386551 -14036276 + T-rich Low_complexity Low_complexity 2 70 0 1 648 21 36 0 0 chrX 8387123 8387151 -14035676 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 1563 267 19 21 chrX 8389537 8389649 -14033178 + SAR_DM Satellite Satellite 215 440 -1032 1 649 2950 6 0 0 chrX 8389649 8390009 -14032818 - XDMR_DM Unknown Unknown 0 360 1 1 649 1563 267 19 21 chrX 8390009 8390241 -14032586 + SAR_DM Satellite Satellite 441 916 -556 1 649 1533 71 4 0 chrX 8390039 8390264 -14032563 - XDMR Unknown Unknown 0 361 136 1 649 207 0 0 0 chrX 8392275 8392298 -14030529 + (T)n Simple_repeat Simple_repeat 1 23 0 1 649 186 43 0 0 chrX 8393601 8393624 -14029203 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 649 213 132 0 0 chrX 8394525 8394563 -14028264 + (CGAAA)n Simple_repeat Simple_repeat 3 40 0 1 649 211 255 0 0 chrX 8396120 8396167 -14026660 + (CCG)n Simple_repeat Simple_repeat 3 49 0 1 649 180 182 0 0 chrX 8396709 8396753 -14026074 + A-rich Low_complexity Low_complexity 1 44 0 1 649 21 57 0 0 chrX 8397518 8397553 -14025274 + AT_rich Low_complexity Low_complexity 1 35 0 1 649 212 186 0 23 chrX 8398612 8398656 -14024171 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 1 649 225 0 0 0 chrX 8399118 8399143 -14023684 + (AAATG)n Simple_repeat Simple_repeat 3 27 0 1 649 214 273 0 18 chrX 8399676 8399732 -14023095 + (TATG)n Simple_repeat Simple_repeat 4 58 0 1 649 26 0 0 0 chrX 8401419 8401445 -14021382 + AT_rich Low_complexity Low_complexity 1 26 0 1 649 210 250 0 56 chrX 8403904 8403993 -14018834 + A-rich Low_complexity Low_complexity 1 84 0 1 649 305 187 13 0 chrX 8404537 8404612 -14018215 + (CAA)n Simple_repeat Simple_repeat 1 76 0 1 649 300 111 0 0 chrX 8404982 8405036 -14017791 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 649 206 62 0 30 chrX 8405633 8405666 -14017161 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 649 189 74 0 0 chrX 8405916 8405943 -14016884 + (T)n Simple_repeat Simple_repeat 1 27 0 1 649 261 0 0 0 chrX 8406320 8406349 -14016478 + (TTTCG)n Simple_repeat Simple_repeat 2 30 0 1 649 450 143 0 0 chrX 8406493 8406584 -14016243 + (CGG)n Simple_repeat Simple_repeat 3 93 0 1 649 231 36 0 0 chrX 8410942 8410970 -14011857 + (TAA)n Simple_repeat Simple_repeat 3 30 0 1 649 240 158 0 0 chrX 8412601 8412658 -14010169 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 649 189 171 0 0 chrX 8413112 8413147 -14009680 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 649 23 0 0 0 chrX 8413221 8413244 -14009583 + AT_rich Low_complexity Low_complexity 1 23 0 1 649 23 33 0 0 chrX 8413395 8413425 -14009402 + AT_rich Low_complexity Low_complexity 1 30 0 1 649 189 0 0 0 chrX 8413481 8413502 -14009325 + (A)n Simple_repeat Simple_repeat 1 21 0 1 649 205 186 0 0 chrX 8414907 8414950 -14007877 + A-rich Low_complexity Low_complexity 1 43 0 1 649 21 36 0 0 chrX 8416707 8416735 -14006092 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 198 103 0 0 chrX 8416927 8416956 -14005871 + (TATG)n Simple_repeat Simple_repeat 3 31 0 1 649 225 108 0 0 chrX 8417786 8417823 -14005004 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 1 649 212 131 0 21 chrX 8419200 8419247 -14003580 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 649 230 120 0 57 chrX 8420743 8420796 -14002031 + CT-rich Low_complexity Low_complexity 3 52 0 1 649 198 0 0 0 chrX 8422302 8422324 -14000503 + (TGG)n Simple_repeat Simple_repeat 3 24 0 1 649 291 28 0 0 chrX 8423487 8423523 -13999304 + (ATG)n Simple_repeat Simple_repeat 3 38 0 1 649 191 62 62 0 chrX 8424177 8424209 -13998618 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 649 662 132 0 37 chrX 8424548 8424682 -13998145 - XDMR_DM Unknown Unknown -229 131 3 1 649 1620 258 34 18 chrX 8424562 8424715 -13998112 + SAR_DM Satellite Satellite 199 523 -949 1 649 2149 105 23 0 chrX 8424715 8425068 -13997759 - XDMR Unknown Unknown 0 361 1 1 649 1620 258 34 18 chrX 8425068 8425234 -13997593 + SAR_DM Satellite Satellite 524 881 -591 1 649 27 29 0 0 chrX 8426070 8426104 -13996723 + AT_rich Low_complexity Low_complexity 1 34 0 1 649 219 173 0 19 chrX 8427929 8427982 -13994845 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 649 254 106 21 0 chrX 8428130 8428177 -13994650 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 649 213 163 0 23 chrX 8433981 8434025 -13988802 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 649 234 156 0 0 chrX 8434306 8434351 -13988476 + T-rich Low_complexity Low_complexity 1 45 0 1 649 189 0 0 0 chrX 8434699 8434720 -13988107 + (T)n Simple_repeat Simple_repeat 1 21 0 1 649 28 0 0 0 chrX 8435455 8435483 -13987344 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 25 51 0 0 chrX 8435724 8435763 -13987064 + AT_rich Low_complexity Low_complexity 1 39 0 1 649 191 88 0 29 chrX 8436341 8436376 -13986451 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 649 200 100 25 0 chrX 8436575 8436615 -13986212 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 649 201 132 0 0 chrX 8437996 8438034 -13984793 + (A)n Simple_repeat Simple_repeat 1 38 0 1 649 22 0 0 0 chrX 8438170 8438192 -13984635 + AT_rich Low_complexity Low_complexity 1 22 0 1 649 24 0 0 0 chrX 8438262 8438286 -13984541 + AT_rich Low_complexity Low_complexity 1 24 0 1 649 201 143 0 0 chrX 8442252 8442287 -13980540 + (CAT)n Simple_repeat Simple_repeat 3 37 0 1 649 324 102 0 0 chrX 8443121 8443170 -13979657 + (CAA)n Simple_repeat Simple_repeat 1 49 0 1 649 198 0 0 0 chrX 8443393 8443415 -13979412 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 649 21 0 0 0 chrX 8444009 8444030 -13978797 + AT_rich Low_complexity Low_complexity 1 21 0 1 649 181 57 28 28 chrX 8444463 8444499 -13978328 + (CAA)n Simple_repeat Simple_repeat 2 37 0 1 649 22 35 0 0 chrX 8444643 8444672 -13978155 + AT_rich Low_complexity Low_complexity 1 29 0 1 649 25 36 0 52 chrX 8444805 8444863 -13977964 + AT_rich Low_complexity Low_complexity 1 55 0 1 649 21 36 0 0 chrX 8444975 8445003 -13977824 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 22 35 0 0 chrX 8445149 8445178 -13977649 + AT_rich Low_complexity Low_complexity 1 29 0 1 649 23 54 0 0 chrX 8445427 8445464 -13977363 + AT_rich Low_complexity Low_complexity 1 37 0 1 649 210 118 0 0 chrX 8446152 8446186 -13976641 + (A)n Simple_repeat Simple_repeat 1 34 0 1 649 24 32 0 0 chrX 8446443 8446474 -13976353 + AT_rich Low_complexity Low_complexity 1 31 0 1 649 26 30 0 0 chrX 8447460 8447493 -13975334 + AT_rich Low_complexity Low_complexity 1 33 0 1 649 203 146 49 0 chrX 8448063 8448104 -13974723 + A-rich Low_complexity Low_complexity 4 46 0 1 649 204 67 0 0 chrX 8448451 8448481 -13974346 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1 649 237 65 0 0 chrX 8449475 8449506 -13973321 + (TCC)n Simple_repeat Simple_repeat 1 31 0 1 649 29 0 0 0 chrX 8452947 8452976 -13969851 + AT_rich Low_complexity Low_complexity 1 29 0 1 649 198 0 0 0 chrX 8457552 8457574 -13965253 + (CAG)n Simple_repeat Simple_repeat 2 23 0 1 649 252 100 0 0 chrX 8457582 8457622 -13965205 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1 649 254 253 23 11 chrX 8457740 8457828 -13964999 + (CAG)n Simple_repeat Simple_repeat 3 91 0 1 649 277 297 0 0 chrX 8460597 8460688 -13962139 + (CCA)n Simple_repeat Simple_repeat 1 91 0 1 649 302 148 0 0 chrX 8460776 8460830 -13961997 + ROO_I LTR Pao 681 734 -7522 1 649 253 204 0 0 chrX 8461010 8461064 -13961763 + GA-rich Low_complexity Low_complexity 2 55 0 1 649 348 43 0 0 chrX 8461349 8461395 -13961432 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 649 25 0 0 0 chrX 8461940 8461965 -13960862 + AT_rich Low_complexity Low_complexity 1 25 0 1 649 270 171 0 0 chrX 8462040 8462110 -13960717 + A-rich Low_complexity Low_complexity 1 70 0 1 649 263 209 15 0 chrX 8463953 8464020 -13958807 + (TTAAA)n Simple_repeat Simple_repeat 2 69 0 1 649 284 186 14 0 chrX 8468042 8468112 -13954715 - BARI1 DNA Tc1 -43 1707 1637 1 649 300 67 0 43 chrX 8468106 8468153 -13954674 - BARI1 DNA Tc1 -1651 99 55 1 649 28 0 0 0 chrX 8469780 8469808 -13953019 + AT_rich Low_complexity Low_complexity 1 28 0 1 649 228 86 0 0 chrX 8470471 8470506 -13952321 + (T)n Simple_repeat Simple_repeat 1 35 0 1 649 258 105 0 0 chrX 8470825 8470863 -13951964 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 649 1978 256 61 31 chrX 8471499 8471651 -13951176 + SAR_DM Satellite Satellite 205 711 -761 1 649 2568 78 3 0 chrX 8471651 8472011 -13950816 - XDMR Unknown Unknown 0 361 1 1 649 2206 73 94 3 chrX 8472011 8472342 -13950485 - XDMR Unknown Unknown 0 361 1 1 649 736 194 62 6 chrX 8472342 8472518 -13950309 - XDMR Unknown Unknown 0 361 176 1 649 1978 256 61 31 chrX 8472342 8472495 -13950332 + SAR_DM Satellite Satellite 712 1230 -242 1 649 21 57 0 0 chrX 8473301 8473336 -13949491 + AT_rich Low_complexity Low_complexity 1 35 0 1 649 216 97 0 0 chrX 8474203 8474234 -13948593 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 649 25 0 0 0 chrX 8475634 8475659 -13947168 + AT_rich Low_complexity Low_complexity 1 25 0 1 649 206 236 0 0 chrX 8476069 8476124 -13946703 + A-rich Low_complexity Low_complexity 1 55 0 1 649 198 0 0 0 chrX 8476937 8476959 -13945868 + (T)n Simple_repeat Simple_repeat 1 22 0 1 649 237 65 0 0 chrX 8477194 8477225 -13945602 + (CAGA)n Simple_repeat Simple_repeat 1 31 0 1 649 216 0 0 0 chrX 8480285 8480309 -13942518 + (CAGTT)n Simple_repeat Simple_repeat 3 26 0 1 649 21 0 0 0 chrX 8480423 8480444 -13942383 + AT_rich Low_complexity Low_complexity 1 21 0 1 649 221 128 21 0 chrX 8486440 8486487 -13936340 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 649 227 222 0 0 chrX 8486821 8486866 -13935961 + (TTG)n Simple_repeat Simple_repeat 1 45 0 1 649 27 29 0 0 chrX 8492067 8492101 -13930726 + AT_rich Low_complexity Low_complexity 1 34 0 1 649 223 191 0 0 chrX 8493229 8493271 -13929556 + (CAT)n Simple_repeat Simple_repeat 1 42 0 1 649 200 191 0 0 chrX 8498131 8498173 -13924654 + CT-rich Low_complexity Low_complexity 1 42 0 1 649 241 335 0 50 chrX 8498412 8498594 -13924233 + CT-rich Low_complexity Low_complexity 3 175 0 1 649 204 188 0 0 chrX 8501350 8501382 -13921445 + G-rich Low_complexity Low_complexity 1 32 0 1 649 768 65 0 0 chrX 8502291 8502398 -13920429 + (GGA)n Simple_repeat Simple_repeat 3 109 0 1 649 24 32 0 0 chrX 8503338 8503369 -13919458 + AT_rich Low_complexity Low_complexity 1 31 0 1 649 25 0 0 0 chrX 8504973 8504998 -13917829 + AT_rich Low_complexity Low_complexity 1 25 0 1 649 237 153 95 63 chrX 8505170 8505233 -13917594 + Stalker2_LTR LTR Gypsy 217 281 -143 1 649 1846 268 50 56 chrX 8505709 8507644 -13915183 - SAR_DM Satellite Satellite -185 1923 1 1 649 256 270 0 0 chrX 8508688 8508762 -13914065 + (TA)n Simple_repeat Simple_repeat 1 74 0 1 649 22 0 0 0 chrX 8509501 8509523 -13913304 + AT_rich Low_complexity Low_complexity 1 22 0 1 649 201 132 0 0 chrX 8510223 8510261 -13912566 + (T)n Simple_repeat Simple_repeat 1 38 0 1 649 21 0 0 0 chrX 8511234 8511255 -13911572 + AT_rich Low_complexity Low_complexity 1 21 0 1 649 33 0 0 0 chrX 8511400 8511433 -13911394 + AT_rich Low_complexity Low_complexity 1 33 0 1 649 201 182 0 0 chrX 8513635 8513668 -13909159 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 649 21 57 0 0 chrX 8514071 8514106 -13908721 + AT_rich Low_complexity Low_complexity 1 35 0 1 649 21 0 0 0 chrX 8514758 8514779 -13908048 + AT_rich Low_complexity Low_complexity 1 21 0 1 649 224 226 16 0 chrX 8515113 8515175 -13907652 + (CTG)n Simple_repeat Simple_repeat 1 63 0 1 649 318 26 0 0 chrX 8516468 8516507 -13906320 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 649 206 197 0 83 chrX 8517044 8517116 -13905711 + (TAA)n Simple_repeat Simple_repeat 2 67 0 1 649 24 32 0 0 chrX 8517315 8517346 -13905481 + AT_rich Low_complexity Low_complexity 1 31 0 1 649 183 42 0 0 chrX 8518255 8518279 -13904548 + (TTAG)n Simple_repeat Simple_repeat 2 25 0 1 650 21 57 0 0 chrX 8519975 8520010 -13902817 + AT_rich Low_complexity Low_complexity 1 35 0 1 650 203 157 20 0 chrX 8520251 8520302 -13902525 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 650 233 204 0 0 chrX 8522459 8522513 -13900314 + (CCCCAA)n Simple_repeat Simple_repeat 1 54 0 1 650 198 91 0 0 chrX 8522539 8522572 -13900255 + (GGAAA)n Simple_repeat Simple_repeat 4 36 0 1 650 818 209 75 25 chrX 8523297 8523537 -13899290 - SAR_DM Satellite Satellite -666 806 555 1 650 347 279 23 41 chrX 8523388 8523560 -13899267 + XDMR Unknown Unknown 1 169 -192 1 650 21 36 0 0 chrX 8524197 8524225 -13898602 + AT_rich Low_complexity Low_complexity 1 28 0 1 650 22 0 0 0 chrX 8524278 8524300 -13898527 + AT_rich Low_complexity Low_complexity 1 22 0 1 650 239 159 15 31 chrX 8524328 8524393 -13898434 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 650 249 47 77 15 chrX 8524562 8524627 -13898200 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 650 210 239 21 21 chrX 8524778 8524872 -13897955 + (TA)n Simple_repeat Simple_repeat 1 94 0 1 650 197 83 28 0 chrX 8525222 8525258 -13897569 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 650 204 163 23 0 chrX 8525258 8525301 -13897526 + T-rich Low_complexity Low_complexity 4 47 0 1 650 31 0 0 0 chrX 8525857 8525888 -13896939 + AT_rich Low_complexity Low_complexity 1 31 0 1 650 258 266 0 0 chrX 8526399 8526478 -13896349 + (ATG)n Simple_repeat Simple_repeat 3 81 0 1 650 189 163 0 0 chrX 8526478 8526527 -13896300 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 650 498 109 0 0 chrX 8526550 8526642 -13896185 + (CCCGAA)n Simple_repeat Simple_repeat 1 92 0 1 650 183 80 0 0 chrX 8527319 8527344 -13895483 + (CCG)n Simple_repeat Simple_repeat 2 26 0 1 650 207 297 8 51 chrX 8527468 8527585 -13895242 + (CTG)n Simple_repeat Simple_repeat 1 112 0 1 650 216 290 0 31 chrX 8527663 8527727 -13895100 + (CTG)n Simple_repeat Simple_repeat 3 64 0 1 650 278 244 21 53 chrX 8527817 8527912 -13894915 - ROO_I LTR Pao -7527 729 638 1 650 29 28 0 0 chrX 8528284 8528320 -13894507 + AT_rich Low_complexity Low_complexity 1 36 0 1 650 255 61 0 0 chrX 8531886 8531919 -13890908 + (CAGAC)n Simple_repeat Simple_repeat 5 37 0 1 650 180 0 0 0 chrX 8532810 8532830 -13889997 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 1 650 274 61 0 39 chrX 8533063 8533114 -13889713 + (CAAAG)n Simple_repeat Simple_repeat 1 49 0 1 650 180 200 0 0 chrX 8534949 8534994 -13887833 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 650 198 0 0 0 chrX 8535024 8535046 -13887781 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 650 21 0 0 0 chrX 8535434 8535455 -13887372 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 248 242 0 0 chrX 8535901 8535967 -13886860 + T-rich Low_complexity Low_complexity 1 66 0 1 650 214 191 0 0 chrX 8538955 8538997 -13883830 + A-rich Low_complexity Low_complexity 1 42 0 1 650 180 77 0 0 chrX 8539011 8539037 -13883790 + (T)n Simple_repeat Simple_repeat 1 26 0 1 650 201 182 0 0 chrX 8540289 8540322 -13882505 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 650 21 0 0 0 chrX 8540690 8540711 -13882116 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 204 97 0 0 chrX 8542087 8542118 -13880709 + (AAATG)n Simple_repeat Simple_repeat 3 33 0 1 650 243 114 0 0 chrX 8544238 8544282 -13878545 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 650 192 179 0 0 chrX 8544493 8544532 -13878295 + (GTTTG)n Simple_repeat Simple_repeat 5 43 0 1 650 200 222 54 27 chrX 8544586 8544660 -13878167 + (CGAG)n Simple_repeat Simple_repeat 4 79 0 1 650 183 42 0 0 chrX 8544994 8545018 -13877809 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 650 235 254 16 0 chrX 8545126 8545189 -13877638 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 650 216 97 0 0 chrX 8545454 8545485 -13877342 + (CTG)n Simple_repeat Simple_repeat 2 32 0 1 650 180 0 0 0 chrX 8549459 8549479 -13873348 + (ATG)n Simple_repeat Simple_repeat 2 21 0 1 650 205 291 0 0 chrX 8551052 8551107 -13871720 + G-rich Low_complexity Low_complexity 1 55 0 1 650 339 25 0 0 chrX 8551269 8551309 -13871518 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 650 201 147 0 0 chrX 8551954 8551988 -13870839 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 650 26 88 0 0 chrX 8552630 8552698 -13870129 + AT_rich Low_complexity Low_complexity 1 68 0 1 650 220 102 20 20 chrX 8552775 8552825 -13870002 + (CATAT)n Simple_repeat Simple_repeat 1 50 0 1 650 204 274 0 0 chrX 8555209 8555271 -13867556 + GA-rich Low_complexity Low_complexity 2 63 0 1 650 248 263 0 0 chrX 8555295 8555352 -13867475 + (CCCCAA)n Simple_repeat Simple_repeat 2 58 0 1 650 39 38 0 0 chrX 8555855 8555908 -13866919 + AT_rich Low_complexity Low_complexity 1 53 0 1 650 23 86 0 0 chrX 8555995 8556053 -13866774 + AT_rich Low_complexity Low_complexity 1 58 0 1 650 206 128 0 25 chrX 8556258 8556298 -13866529 + (CTG)n Simple_repeat Simple_repeat 1 39 0 1 650 189 74 0 0 chrX 8556590 8556617 -13866210 + (G)n Simple_repeat Simple_repeat 1 27 0 1 650 246 128 0 0 chrX 8558111 8558150 -13864677 + (CAAAT)n Simple_repeat Simple_repeat 1 39 0 1 650 191 88 29 0 chrX 8558206 8558240 -13864587 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 650 454 248 13 40 chrX 8558492 8558643 -13864184 - XDMR Unknown Unknown -214 147 1 1 650 1494 273 45 52 chrX 8558516 8559507 -13863320 + SAR_DM Satellite Satellite 229 1213 -259 1 650 214 111 74 0 chrX 8559814 8559868 -13862959 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 650 251 140 20 0 chrX 8561319 8561369 -13861458 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 650 209 204 0 0 chrX 8562967 8563016 -13859811 + T-rich Low_complexity Low_complexity 1 49 0 1 650 22 56 0 0 chrX 8563380 8563416 -13859411 + AT_rich Low_complexity Low_complexity 1 36 0 1 650 207 139 0 0 chrX 8563903 8563939 -13858888 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 650 199 79 0 50 chrX 8566422 8566462 -13856365 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 650 213 196 0 0 chrX 8567814 8567865 -13854962 + (CAT)n Simple_repeat Simple_repeat 2 52 0 1 650 207 69 0 0 chrX 8568095 8568124 -13854703 + (CATA)n Simple_repeat Simple_repeat 4 32 0 1 650 240 35 0 0 chrX 8568936 8568965 -13853862 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 650 237 250 0 15 chrX 8570383 8570448 -13852379 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 650 207 114 0 0 chrX 8570658 8570693 -13852134 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 1 650 231 114 0 0 chrX 8571337 8571372 -13851455 + (CAG)n Simple_repeat Simple_repeat 3 37 0 1 650 198 91 0 0 chrX 8574406 8574439 -13848388 + (T)n Simple_repeat Simple_repeat 1 33 0 1 650 201 121 0 0 chrX 8577515 8577548 -13845279 + (ATTCG)n Simple_repeat Simple_repeat 4 36 0 1 650 29 0 0 0 chrX 8578285 8578314 -13844513 + AT_rich Low_complexity Low_complexity 1 29 0 1 650 208 182 54 18 chrX 8579461 8579517 -13843310 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1 650 375 78 0 0 chrX 8582410 8582461 -13840366 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 650 26 82 0 0 chrX 8585769 8585830 -13836997 + AT_rich Low_complexity Low_complexity 1 61 0 1 650 207 100 0 0 chrX 8586248 8586278 -13836549 + (CTG)n Simple_repeat Simple_repeat 1 30 0 1 650 220 191 0 0 chrX 8586470 8586512 -13836315 + (CTG)n Simple_repeat Simple_repeat 1 42 0 1 650 23 0 0 0 chrX 8586926 8586949 -13835878 + AT_rich Low_complexity Low_complexity 1 23 0 1 650 22 35 0 0 chrX 8587033 8587062 -13835765 + AT_rich Low_complexity Low_complexity 1 29 0 1 650 189 0 0 0 chrX 8587852 8587873 -13834954 + (A)n Simple_repeat Simple_repeat 1 21 0 1 650 21 36 0 0 chrX 8588131 8588159 -13834668 + AT_rich Low_complexity Low_complexity 1 28 0 1 650 30 59 0 0 chrX 8588194 8588245 -13834582 + AT_rich Low_complexity Low_complexity 1 51 0 1 650 23 33 0 0 chrX 8588602 8588632 -13834195 + AT_rich Low_complexity Low_complexity 1 30 0 1 650 24 0 0 0 chrX 8589297 8589321 -13833506 + AT_rich Low_complexity Low_complexity 1 24 0 1 650 38 39 0 0 chrX 8589834 8589886 -13832941 + AT_rich Low_complexity Low_complexity 1 52 0 1 650 258 32 0 0 chrX 8590347 8590378 -13832449 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 650 213 139 0 0 chrX 8591185 8591228 -13831599 + (A)n Simple_repeat Simple_repeat 1 43 0 1 650 183 80 0 0 chrX 8592434 8592459 -13830368 + (CAG)n Simple_repeat Simple_repeat 1 25 0 1 650 847 207 29 25 chrX 8592992 8593230 -13829597 + XDMR_DM Unknown Unknown 103 341 -19 1 650 2036 267 41 50 chrX 8593019 8593219 -13829608 - SAR_DM Satellite Satellite -203 1269 680 1 650 2627 70 3 3 chrX 8593219 8593580 -13829247 + XDMR Unknown Unknown 1 361 0 1 650 2670 64 6 0 chrX 8593580 8593939 -13828888 + XDMR Unknown Unknown 1 361 0 1 650 2721 64 3 0 chrX 8593939 8594299 -13828528 + XDMR Unknown Unknown 1 361 0 1 650 2036 267 41 50 chrX 8593939 8594099 -13828728 - SAR_DM Satellite Satellite -203 679 200 1 650 2687 64 3 0 chrX 8594299 8594659 -13828168 + XDMR Unknown Unknown 1 361 0 1 650 2732 58 6 0 chrX 8594659 8595018 -13827809 + XDMR Unknown Unknown 1 361 0 1 650 2772 58 3 0 chrX 8595018 8595378 -13827449 + XDMR Unknown Unknown 1 361 0 1 650 2665 69 3 0 chrX 8595378 8595738 -13827089 + XDMR Unknown Unknown 1 361 0 1 650 1884 263 41 50 chrX 8595550 8595738 -13827089 - SAR_DM Satellite Satellite -218 1254 653 1 650 2683 67 3 0 chrX 8595738 8596098 -13826729 + XDMR Unknown Unknown 1 361 0 1 650 2498 92 3 0 chrX 8596098 8596458 -13826369 + XDMR Unknown Unknown 1 361 0 1 650 1884 263 41 50 chrX 8596458 8596589 -13826238 - SAR_DM Satellite Satellite -218 652 225 1 650 258 136 0 0 chrX 8597943 8597987 -13824840 + (ATG)n Simple_repeat Simple_repeat 3 46 0 1 650 225 0 0 0 chrX 8598135 8598160 -13824667 + (GAA)n Simple_repeat Simple_repeat 1 25 0 1 650 180 0 0 0 chrX 8598807 8598827 -13824000 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 650 201 132 0 0 chrX 8598851 8598889 -13823938 + (TAAAAA)n Simple_repeat Simple_repeat 4 41 0 1 650 201 188 21 0 chrX 8599745 8599793 -13823034 + (CAA)n Simple_repeat Simple_repeat 1 49 0 1 650 21 0 0 0 chrX 8599979 8600000 -13822827 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 234 116 0 0 chrX 8600039 8600082 -13822745 + (TATAA)n Simple_repeat Simple_repeat 1 43 0 1 650 21 0 0 0 chrX 8600084 8600105 -13822722 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 37 39 0 0 chrX 8600232 8600283 -13822544 + AT_rich Low_complexity Low_complexity 1 51 0 1 650 198 192 0 0 chrX 8600664 8600716 -13822111 + T-rich Low_complexity Low_complexity 1 52 0 1 650 21 0 0 0 chrX 8601961 8601982 -13820845 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 207 0 0 0 chrX 8602179 8602202 -13820625 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 650 189 171 0 0 chrX 8603253 8603288 -13819539 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 650 25 51 0 0 chrX 8608286 8608325 -13814502 + AT_rich Low_complexity Low_complexity 1 39 0 1 650 398 235 49 0 chrX 8615571 8615673 -13807154 + XDMR Unknown Unknown 23 129 -232 1 650 249 148 18 18 chrX 8616295 8616350 -13806477 + (GGATG)n Simple_repeat Simple_repeat 2 56 0 1 650 198 0 0 0 chrX 8617163 8617185 -13805642 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 650 244 280 40 35 chrX 8618361 8618535 -13804292 + SAR_DM Satellite Satellite 604 778 -694 1 650 200 208 0 0 chrX 8618741 8618789 -13804038 + A-rich Low_complexity Low_complexity 1 48 0 1 650 208 278 0 0 chrX 8619027 8619081 -13803746 + (CCCGAA)n Simple_repeat Simple_repeat 1 54 0 1 650 201 225 0 0 chrX 8620626 8620666 -13802161 + (TTGGGG)n Simple_repeat Simple_repeat 1 40 0 1 650 39 0 0 0 chrX 8623664 8623703 -13799124 + AT_rich Low_complexity Low_complexity 1 39 0 1 650 204 200 0 0 chrX 8623940 8623980 -13798847 + (CGGA)n Simple_repeat Simple_repeat 2 41 0 1 650 285 155 0 0 chrX 8624063 8624121 -13798706 + (CCAA)n Simple_repeat Simple_repeat 4 61 0 1 650 300 91 0 0 chrX 8624274 8624318 -13798509 + (AACTG)n Simple_repeat Simple_repeat 2 45 0 1 650 23 0 0 0 chrX 8627687 8627710 -13795117 + AT_rich Low_complexity Low_complexity 1 23 0 1 650 297 135 0 0 chrX 8628008 8628060 -13794767 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 650 186 43 0 0 chrX 8628177 8628200 -13794627 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 650 227 340 10 0 chrX 8628771 8628874 -13793953 + (CAA)n Simple_repeat Simple_repeat 1 104 0 1 650 2631 68 3 0 chrX 8629105 8629460 -13793367 + XDMR Unknown Unknown 6 361 0 1 650 1912 265 31 36 chrX 8629106 8629460 -13793367 - SAR_DM Satellite Satellite -405 1067 479 1 650 2735 61 3 0 chrX 8629460 8629820 -13793007 + XDMR Unknown Unknown 1 361 0 1 650 1810 93 4 0 chrX 8629820 8630078 -13792749 + XDMR Unknown Unknown 1 259 -102 1 650 1912 265 31 36 chrX 8629820 8629997 -13792830 - SAR_DM Satellite Satellite -405 478 181 1 650 201 176 0 0 chrX 8630599 8630633 -13792194 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 650 255 31 0 0 chrX 8635481 8635513 -13787314 + (CTG)n Simple_repeat Simple_repeat 3 34 0 1 650 321 162 0 0 chrX 8637743 8637811 -13785016 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 650 192 214 0 0 chrX 8638846 8638902 -13783925 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 650 266 241 143 29 chrX 8638974 8639149 -13783678 + XDMR_DM Unknown Unknown 166 360 0 1 650 304 214 51 51 chrX 8639043 8639181 -13783646 - SAR_DM Satellite Satellite -682 790 653 1 650 264 30 0 0 chrX 8639456 8639489 -13783338 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 650 28 48 0 0 chrX 8639521 8639563 -13783264 + AT_rich Low_complexity Low_complexity 1 42 0 1 650 274 170 0 0 chrX 8640964 8641017 -13781810 - DNAREP1_DM LINE Penelope 0 594 542 1 650 305 105 211 0 chrX 8641039 8641096 -13781731 - DNAREP1_DM LINE Penelope -238 356 288 1 650 465 174 193 0 chrX 8641098 8641207 -13781620 - DNAREP1_DM LINE Penelope -463 131 2 1 650 225 119 0 0 chrX 8641563 8641605 -13781222 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 650 21 0 0 0 chrX 8643157 8643178 -13779649 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 28 48 0 0 chrX 8643926 8643968 -13778859 + AT_rich Low_complexity Low_complexity 1 42 0 1 650 21 0 0 0 chrX 8644308 8644329 -13778498 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 1262 153 22 9 chrX 8644390 8644620 -13778207 - XDMR Unknown Unknown -128 233 1 1 650 2116 272 33 42 chrX 8644445 8644620 -13778207 + SAR_DM Satellite Satellite 182 694 -778 1 650 2811 53 3 0 chrX 8644620 8644980 -13777847 - XDMR Unknown Unknown 0 361 1 1 650 2647 69 3 0 chrX 8644980 8645340 -13777487 - XDMR Unknown Unknown 0 361 1 1 650 2736 61 3 0 chrX 8645340 8645700 -13777127 - XDMR Unknown Unknown 0 361 1 1 650 2116 272 33 42 chrX 8645340 8645528 -13777299 + SAR_DM Satellite Satellite 695 1254 -218 1 650 2677 67 3 0 chrX 8645700 8646060 -13776767 - XDMR Unknown Unknown 0 361 1 1 650 2104 276 36 33 chrX 8645900 8646060 -13776767 + SAR_DM Satellite Satellite 200 703 -769 1 650 2711 67 3 0 chrX 8646060 8646420 -13776407 - XDMR Unknown Unknown 0 361 1 1 650 2691 69 3 0 chrX 8646420 8646780 -13776047 - XDMR Unknown Unknown 0 361 1 1 650 2104 276 36 33 chrX 8646780 8646952 -13775875 + SAR_DM Satellite Satellite 704 1254 -218 1 650 1761 83 4 0 chrX 8646788 8647042 -13775785 - XDMR Unknown Unknown -24 337 83 1 650 240 172 0 0 chrX 8649306 8649364 -13773463 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 650 228 290 0 0 chrX 8649737 8649806 -13773021 + (TATG)n Simple_repeat Simple_repeat 4 72 0 1 650 30 0 0 0 chrX 8650577 8650607 -13772220 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 22 0 0 0 chrX 8651428 8651450 -13771377 + AT_rich Low_complexity Low_complexity 1 22 0 1 651 189 0 0 0 chrX 8651856 8651877 -13770950 + (TAA)n Simple_repeat Simple_repeat 1 21 0 1 651 221 250 0 15 chrX 8651953 8652018 -13770809 + CT-rich Low_complexity Low_complexity 2 65 0 1 651 405 104 26 13 chrX 8652192 8652270 -13770557 + (CTG)n Simple_repeat Simple_repeat 3 81 0 1 651 195 42 0 0 chrX 8652294 8652318 -13770509 + (CGG)n Simple_repeat Simple_repeat 1 24 0 1 651 222 235 0 0 chrX 8653628 8653679 -13769148 + T-rich Low_complexity Low_complexity 1 51 0 1 651 219 88 0 0 chrX 8654219 8654253 -13768574 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1 651 21 0 0 0 chrX 8655405 8655426 -13767401 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 201 268 0 0 chrX 8655815 8655856 -13766971 + (CATA)n Simple_repeat Simple_repeat 4 44 0 1 651 180 0 0 0 chrX 8656757 8656777 -13766050 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 651 195 69 0 0 chrX 8658797 8658826 -13764001 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1 651 212 130 22 0 chrX 8660275 8660321 -13762506 + (CCGAA)n Simple_repeat Simple_repeat 1 47 0 1 651 180 0 0 0 chrX 8660639 8660659 -13762168 + (A)n Simple_repeat Simple_repeat 1 20 0 1 651 249 214 0 0 chrX 8661397 8661453 -13761374 + T-rich Low_complexity Low_complexity 1 56 0 1 651 411 106 0 0 chrX 8663769 8663835 -13758992 + (GTCTG)n Simple_repeat Simple_repeat 5 70 0 1 651 264 30 0 0 chrX 8665802 8665835 -13756992 + (CAG)n Simple_repeat Simple_repeat 2 34 0 1 651 229 229 0 0 chrX 8667584 8667632 -13755195 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 651 210 100 24 24 chrX 8669220 8669261 -13753566 + (CAA)n Simple_repeat Simple_repeat 3 43 0 1 651 183 114 0 0 chrX 8669934 8669969 -13752858 + (A)n Simple_repeat Simple_repeat 1 35 0 1 651 39 22 0 0 chrX 8670350 8670396 -13752431 + AT_rich Low_complexity Low_complexity 1 46 0 1 651 21 0 0 0 chrX 8671288 8671309 -13751518 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 283 44 44 0 chrX 8673487 8673532 -13749295 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 651 258 148 0 0 chrX 8673784 8673838 -13748989 + (A)n Simple_repeat Simple_repeat 1 54 0 1 651 411 21 0 0 chrX 8675782 8675830 -13746997 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 651 214 186 0 0 chrX 8677270 8677313 -13745514 + A-rich Low_complexity Low_complexity 1 43 0 1 651 24 0 0 0 chrX 8677758 8677782 -13745045 + AT_rich Low_complexity Low_complexity 1 24 0 1 651 203 175 0 0 chrX 8677864 8677904 -13744923 + A-rich Low_complexity Low_complexity 2 41 0 1 651 207 200 0 0 chrX 8679663 8679708 -13743119 + T-rich Low_complexity Low_complexity 1 45 0 1 651 246 128 0 0 chrX 8680456 8680495 -13742332 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 651 29 28 0 0 chrX 8682973 8683009 -13739818 + AT_rich Low_complexity Low_complexity 1 36 0 1 651 202 296 0 40 chrX 8684256 8684330 -13738497 + GA-rich Low_complexity Low_complexity 99 169 0 1 651 270 73 0 0 chrX 8684756 8684797 -13738030 + (T)n Simple_repeat Simple_repeat 1 41 0 1 651 255 261 23 0 chrX 8685085 8685173 -13737654 + (CAG)n Simple_repeat Simple_repeat 1 90 0 1 651 25 31 0 0 chrX 8685742 8685774 -13737053 + AT_rich Low_complexity Low_complexity 1 32 0 1 651 197 83 28 0 chrX 8686405 8686441 -13736386 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 651 225 197 0 0 chrX 8687012 8687073 -13735754 + A-rich Low_complexity Low_complexity 1 61 0 1 651 234 0 0 0 chrX 8687238 8687264 -13735563 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 651 234 261 0 0 chrX 8687720 8687789 -13735038 + T-rich Low_complexity Low_complexity 1 69 0 1 651 220 229 0 0 chrX 8687942 8687990 -13734837 + A-rich Low_complexity Low_complexity 1 48 0 1 651 213 231 0 0 chrX 8688620 8688672 -13734155 + A-rich Low_complexity Low_complexity 1 52 0 1 651 316 267 0 11 chrX 8689547 8689638 -13733189 + (CAT)n Simple_repeat Simple_repeat 3 92 0 1 651 21 0 0 0 chrX 8690298 8690319 -13732508 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 228 268 0 0 chrX 8693542 8693598 -13729229 + (CGG)n Simple_repeat Simple_repeat 2 57 0 1 651 201 175 0 0 chrX 8693679 8693719 -13729108 + (ATG)n Simple_repeat Simple_repeat 3 42 0 1 651 201 74 0 0 chrX 8693949 8693976 -13728851 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 651 189 180 0 0 chrX 8695046 8695096 -13727731 + A-rich Low_complexity Low_complexity 1 50 0 1 651 226 132 0 36 chrX 8695658 8695713 -13727114 + (CAGAGA)n Simple_repeat Simple_repeat 5 57 0 1 651 189 0 0 0 chrX 8696114 8696135 -13726692 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 651 248 115 12 60 chrX 8696728 8696811 -13726016 - ROO_I LTR Pao -7526 730 652 1 651 216 0 0 0 chrX 8697933 8697957 -13724870 + (T)n Simple_repeat Simple_repeat 1 24 0 1 651 236 273 15 0 chrX 8699254 8699320 -13723507 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 651 22 56 0 0 chrX 8702721 8702757 -13720070 + AT_rich Low_complexity Low_complexity 1 36 0 1 651 183 186 0 0 chrX 8704096 8704139 -13718688 + T-rich Low_complexity Low_complexity 1 43 0 1 651 203 180 31 47 chrX 8705543 8705607 -13717220 + T-rich Low_complexity Low_complexity 2 64 0 1 651 207 69 0 0 chrX 8705633 8705662 -13717165 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 651 189 0 0 0 chrX 8706404 8706425 -13716402 + (A)n Simple_repeat Simple_repeat 1 21 0 1 651 27 29 0 0 chrX 8706545 8706579 -13716248 + AT_rich Low_complexity Low_complexity 1 34 0 1 651 23 0 0 0 chrX 8706710 8706733 -13716094 + AT_rich Low_complexity Low_complexity 1 23 0 1 651 205 238 0 0 chrX 8707387 8707429 -13715398 + G-rich Low_complexity Low_complexity 4 45 0 1 651 266 106 21 0 chrX 8708809 8708856 -13713971 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 651 180 0 0 0 chrX 8708891 8708911 -13713916 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 651 339 25 0 0 chrX 8709594 8709634 -13713193 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 651 276 53 0 0 chrX 8710160 8710198 -13712629 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 651 183 80 0 0 chrX 8710985 8711010 -13711817 + (TATG)n Simple_repeat Simple_repeat 1 25 0 1 651 21 0 0 0 chrX 8711219 8711240 -13711587 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 231 125 0 0 chrX 8711242 8711282 -13711545 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 651 27 0 0 0 chrX 8711565 8711592 -13711235 + AT_rich Low_complexity Low_complexity 1 27 0 1 651 204 97 0 0 chrX 8711871 8711902 -13710925 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 651 213 39 0 0 chrX 8712064 8712090 -13710737 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 651 207 0 0 0 chrX 8713594 8713617 -13709210 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 651 279 122 0 0 chrX 8713677 8713726 -13709101 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 651 318 165 0 102 chrX 8713800 8713928 -13708899 + ROO_I LTR Pao 641 755 -7501 1 651 279 0 0 0 chrX 8714582 8714613 -13708214 + (TCG)n Simple_repeat Simple_repeat 1 31 0 1 651 255 125 0 0 chrX 8714782 8714822 -13708005 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 651 200 59 29 0 chrX 8715554 8715588 -13707239 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 651 23 68 0 0 chrX 8716001 8716045 -13706782 + AT_rich Low_complexity Low_complexity 1 44 0 1 651 27 29 0 0 chrX 8716736 8716770 -13706057 + AT_rich Low_complexity Low_complexity 1 34 0 1 651 316 256 0 0 chrX 8717079 8717169 -13705658 + T-rich Low_complexity Low_complexity 1 90 0 1 651 30 0 0 0 chrX 8718200 8718230 -13704597 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 21 36 0 0 chrX 8718506 8718534 -13704293 + AT_rich Low_complexity Low_complexity 1 28 0 1 651 189 0 0 0 chrX 8718635 8718656 -13704171 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1 651 23 33 0 0 chrX 8720516 8720546 -13702281 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 192 182 0 0 chrX 8721013 8721057 -13701770 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1 651 2469 256 35 47 chrX 8721168 8721684 -13701143 + SAR_DM Satellite Satellite 200 965 -507 1 651 2749 61 3 3 chrX 8721684 8722045 -13700782 - XDMR Unknown Unknown 0 361 1 1 651 2469 256 35 47 chrX 8722045 8722241 -13700586 + SAR_DM Satellite Satellite 966 1259 -213 1 651 226 67 0 43 chrX 8722296 8722343 -13700484 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 1 651 258 160 0 0 chrX 8722949 8722999 -13699828 + (CAA)n Simple_repeat Simple_repeat 1 50 0 1 651 24 0 0 0 chrX 8723297 8723321 -13699506 + AT_rich Low_complexity Low_complexity 1 24 0 1 651 269 246 14 0 chrX 8723466 8723535 -13699292 + (TCG)n Simple_repeat Simple_repeat 2 71 0 1 651 306 164 0 0 chrX 8723623 8723678 -13699149 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 651 202 182 0 0 chrX 8723736 8723769 -13699058 + (TCG)n Simple_repeat Simple_repeat 2 34 0 1 651 210 71 0 0 chrX 8723874 8723902 -13698925 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 651 248 130 0 55 chrX 8724027 8724100 -13698727 + (CCCCAA)n Simple_repeat Simple_repeat 2 70 0 1 651 23 33 0 0 chrX 8726759 8726789 -13696038 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 28 61 0 0 chrX 8727529 8727578 -13695249 + AT_rich Low_complexity Low_complexity 1 49 0 1 651 237 65 0 0 chrX 8727671 8727702 -13695125 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 651 21 0 0 0 chrX 8727871 8727892 -13694935 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 237 65 0 0 chrX 8728622 8728653 -13694174 + (GCTG)n Simple_repeat Simple_repeat 4 34 0 1 651 207 214 0 0 chrX 8730038 8730080 -13692747 + A-rich Low_complexity Low_complexity 1 42 0 1 651 207 386 10 0 chrX 8730260 8730361 -13692466 + (CTGGGG)n Simple_repeat Simple_repeat 3 104 0 1 651 228 229 0 0 chrX 8731571 8731619 -13691208 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 651 1552 272 40 41 chrX 8734278 8734480 -13688347 - SAR_DM Satellite Satellite -205 1267 661 1 651 2494 69 3 0 chrX 8734480 8734840 -13687987 + XDMR Unknown Unknown 1 361 0 1 651 2289 74 3 0 chrX 8734840 8735178 -13687649 + XDMR Unknown Unknown 1 339 -22 1 651 1552 272 40 41 chrX 8735178 8735320 -13687507 - SAR_DM Satellite Satellite -205 660 227 1 651 259 266 37 0 chrX 8735227 8735336 -13687491 + XDMR Unknown Unknown 37 149 -212 1 651 230 282 0 14 chrX 8735668 8735740 -13687087 + G-rich Low_complexity Low_complexity 1 71 0 1 651 216 97 0 0 chrX 8735836 8735867 -13686960 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 651 23 54 0 0 chrX 8736212 8736249 -13686578 + AT_rich Low_complexity Low_complexity 1 37 0 1 651 223 289 0 0 chrX 8738183 8738266 -13684561 + (CAA)n Simple_repeat Simple_repeat 1 83 0 1 651 205 266 0 0 chrX 8738304 8738368 -13684459 + A-rich Low_complexity Low_complexity 1 64 0 1 651 21 57 0 0 chrX 8738726 8738761 -13684066 + AT_rich Low_complexity Low_complexity 1 35 0 1 651 21 0 0 0 chrX 8738805 8738826 -13684001 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 202 229 30 8 chrX 8739551 8739639 -13683188 + A-rich Low_complexity Low_complexity 1 89 0 1 651 231 36 0 0 chrX 8739769 8739797 -13683030 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 651 24 0 0 0 chrX 8739857 8739881 -13682946 + AT_rich Low_complexity Low_complexity 1 24 0 1 651 21 36 0 0 chrX 8741489 8741517 -13681310 + AT_rich Low_complexity Low_complexity 1 28 0 1 651 23 0 0 0 chrX 8742937 8742960 -13679867 + AT_rich Low_complexity Low_complexity 1 23 0 1 651 297 75 0 0 chrX 8743139 8743179 -13679648 + (ATATG)n Simple_repeat Simple_repeat 2 41 0 1 651 24 0 0 0 chrX 8743918 8743942 -13678885 + AT_rich Low_complexity Low_complexity 1 24 0 1 651 201 94 0 0 chrX 8744476 8744508 -13678319 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 651 317 162 0 14 chrX 8744899 8744968 -13677859 + (TTG)n Simple_repeat Simple_repeat 2 69 0 1 651 189 0 0 0 chrX 8745015 8745036 -13677791 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 651 448 234 78 0 chrX 8745132 8745286 -13677541 - XDMR Unknown Unknown -189 172 7 1 651 678 218 56 15 chrX 8745184 8745380 -13677447 + SAR_DM Satellite Satellite 607 810 -662 1 651 851 144 5 26 chrX 8745282 8745474 -13677353 - XDMR Unknown Unknown 0 361 174 1 651 21 0 0 0 chrX 8745587 8745608 -13677219 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 202 106 21 21 chrX 8746738 8746786 -13676041 + (CAAAA)n Simple_repeat Simple_repeat 1 48 0 1 651 26 0 0 0 chrX 8748765 8748791 -13674036 + AT_rich Low_complexity Low_complexity 1 26 0 1 651 29 0 0 0 chrX 8748908 8748937 -13673890 + AT_rich Low_complexity Low_complexity 1 29 0 1 651 27 0 0 0 chrX 8749327 8749354 -13673473 + AT_rich Low_complexity Low_complexity 1 27 0 1 651 308 24 0 24 chrX 8749810 8749852 -13672975 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 651 216 135 0 0 chrX 8750626 8750663 -13672164 + (CAT)n Simple_repeat Simple_repeat 2 38 0 1 651 21 36 0 0 chrX 8751398 8751426 -13671401 + AT_rich Low_complexity Low_complexity 1 28 0 1 651 261 0 0 0 chrX 8751748 8751777 -13671050 + (T)n Simple_repeat Simple_repeat 1 29 0 1 651 22 0 0 0 chrX 8752572 8752594 -13670233 + AT_rich Low_complexity Low_complexity 1 22 0 1 651 23 33 0 0 chrX 8752807 8752837 -13669990 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 24 32 0 0 chrX 8754764 8754795 -13668032 + AT_rich Low_complexity Low_complexity 1 31 0 1 651 22 0 0 0 chrX 8755040 8755062 -13667765 + AT_rich Low_complexity Low_complexity 1 22 0 1 651 183 42 0 0 chrX 8756200 8756224 -13666603 + (T)n Simple_repeat Simple_repeat 1 24 0 1 651 239 294 0 0 chrX 8757090 8757175 -13665652 + T-rich Low_complexity Low_complexity 1 85 0 1 651 209 200 0 39 chrX 8757339 8757391 -13665436 + (CAA)n Simple_repeat Simple_repeat 1 50 0 1 651 21 36 0 0 chrX 8757871 8757899 -13664928 + AT_rich Low_complexity Low_complexity 1 28 0 1 651 27 62 0 0 chrX 8757920 8757968 -13664859 + AT_rich Low_complexity Low_complexity 1 48 0 1 651 188 67 0 32 chrX 8758549 8758580 -13664247 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1 651 31 0 0 0 chrX 8759063 8759094 -13663733 + AT_rich Low_complexity Low_complexity 1 31 0 1 651 195 42 0 0 chrX 8760103 8760127 -13662700 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 651 24 32 0 0 chrX 8760372 8760403 -13662424 + AT_rich Low_complexity Low_complexity 1 31 0 1 651 25 0 0 0 chrX 8761494 8761519 -13661308 + AT_rich Low_complexity Low_complexity 1 25 0 1 651 21 0 0 0 chrX 8761544 8761565 -13661262 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 29 60 0 0 chrX 8762473 8762523 -13660304 + AT_rich Low_complexity Low_complexity 1 50 0 1 651 207 114 0 0 chrX 8762596 8762631 -13660196 + (T)n Simple_repeat Simple_repeat 1 35 0 1 651 355 244 16 16 chrX 8764173 8764298 -13658529 + GA-rich Low_complexity Low_complexity 6 130 0 1 651 261 83 0 0 chrX 8765749 8765785 -13657042 + (TGG)n Simple_repeat Simple_repeat 3 38 0 1 651 28 48 0 0 chrX 8767158 8767200 -13655627 + AT_rich Low_complexity Low_complexity 1 42 0 1 651 220 136 23 0 chrX 8767275 8767319 -13655508 + (TAA)n Simple_repeat Simple_repeat 1 45 0 1 651 268 125 15 15 chrX 8767342 8767407 -13655420 + (TTG)n Simple_repeat Simple_repeat 2 66 0 1 651 212 122 0 24 chrX 8767838 8767880 -13654947 + (CAT)n Simple_repeat Simple_repeat 3 43 0 1 651 183 42 0 0 chrX 8770297 8770321 -13652506 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 651 21 0 0 0 chrX 8770531 8770552 -13652275 + AT_rich Low_complexity Low_complexity 1 21 0 1 651 207 0 0 0 chrX 8770852 8770875 -13651952 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 651 237 65 0 0 chrX 8771478 8771509 -13651318 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 651 31 0 0 0 chrX 8773145 8773176 -13649651 + AT_rich Low_complexity Low_complexity 1 31 0 1 651 23 33 0 0 chrX 8776283 8776313 -13646514 + AT_rich Low_complexity Low_complexity 1 30 0 1 651 210 143 0 0 chrX 8780804 8780839 -13641988 + (CATTT)n Simple_repeat Simple_repeat 2 36 0 1 651 25 65 0 0 chrX 8781299 8781345 -13641482 + AT_rich Low_complexity Low_complexity 1 46 0 1 652 22 0 0 0 chrX 8782697 8782719 -13640108 + AT_rich Low_complexity Low_complexity 1 22 0 1 652 210 91 0 0 chrX 8783819 8783852 -13638975 + (TCC)n Simple_repeat Simple_repeat 3 35 0 1 652 284 271 0 12 chrX 8785433 8785519 -13637308 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 652 230 207 35 0 chrX 8785900 8785958 -13636869 + CT-rich Low_complexity Low_complexity 5 64 0 1 652 26 50 0 0 chrX 8788475 8788515 -13634312 + AT_rich Low_complexity Low_complexity 1 40 0 1 652 227 255 0 0 chrX 8788622 8788673 -13634154 + CT-rich Low_complexity Low_complexity 2 52 0 1 652 201 268 0 0 chrX 8788782 8788838 -13633989 + A-rich Low_complexity Low_complexity 1 56 0 1 652 31 0 0 0 chrX 8789076 8789107 -13633720 + AT_rich Low_complexity Low_complexity 1 31 0 1 652 24 67 0 0 chrX 8791069 8791114 -13631713 + AT_rich Low_complexity Low_complexity 1 45 0 1 652 180 0 0 0 chrX 8791165 8791185 -13631642 + (T)n Simple_repeat Simple_repeat 1 20 0 1 652 180 152 0 0 chrX 8792088 8792121 -13630706 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 652 39 22 0 0 chrX 8792509 8792555 -13630272 + AT_rich Low_complexity Low_complexity 1 46 0 1 652 201 94 0 0 chrX 8792850 8792882 -13629945 + (A)n Simple_repeat Simple_repeat 1 32 0 1 652 21 0 0 0 chrX 8794223 8794244 -13628583 + AT_rich Low_complexity Low_complexity 1 21 0 1 652 30 45 0 0 chrX 8794782 8794826 -13628001 + AT_rich Low_complexity Low_complexity 1 44 0 1 652 255 114 0 0 chrX 8796697 8796741 -13626086 + (ATG)n Simple_repeat Simple_repeat 3 46 0 1 652 25 65 0 0 chrX 8797800 8797846 -13624981 + AT_rich Low_complexity Low_complexity 1 46 0 1 652 285 29 0 0 chrX 8798018 8798052 -13624775 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 652 341 102 0 17 chrX 8798625 8798685 -13624142 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 652 249 277 10 19 chrX 8798879 8798982 -13623845 + (TTG)n Simple_repeat Simple_repeat 1 102 0 1 652 210 150 0 0 chrX 8799671 8799711 -13623116 + (A)n Simple_repeat Simple_repeat 1 40 0 1 652 57 0 0 0 chrX 8800657 8800714 -13622113 + AT_rich Low_complexity Low_complexity 1 57 0 1 652 2070 245 43 20 chrX 8802990 8803823 -13619004 + SAR_DM Satellite Satellite 250 1101 -371 1 652 21 36 0 0 chrX 8804830 8804858 -13617969 + AT_rich Low_complexity Low_complexity 1 28 0 1 652 23 0 0 0 chrX 8804989 8805012 -13617815 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 192 40 0 0 chrX 8805182 8805207 -13617620 + (A)n Simple_repeat Simple_repeat 1 25 0 1 652 27 0 0 0 chrX 8806223 8806250 -13616577 + AT_rich Low_complexity Low_complexity 1 27 0 1 652 206 214 0 0 chrX 8806822 8806864 -13615963 + GA-rich Low_complexity Low_complexity 6 47 0 1 652 28 29 0 0 chrX 8807435 8807470 -13615357 + AT_rich Low_complexity Low_complexity 1 35 0 1 652 221 175 0 0 chrX 8807895 8807935 -13614892 + A-rich Low_complexity Low_complexity 1 40 0 1 652 186 118 0 0 chrX 8809356 8809390 -13613437 + (A)n Simple_repeat Simple_repeat 1 34 0 1 652 41 36 0 0 chrX 8809721 8809776 -13613051 + AT_rich Low_complexity Low_complexity 1 55 0 1 652 240 59 0 0 chrX 8809902 8809936 -13612891 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 652 22 0 0 0 chrX 8811280 8811302 -13611525 + AT_rich Low_complexity Low_complexity 1 22 0 1 652 201 217 22 0 chrX 8812013 8812059 -13610768 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 652 186 103 0 0 chrX 8812369 8812398 -13610429 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 1 652 205 159 45 0 chrX 8813399 8813443 -13609384 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 652 214 143 41 0 chrX 8813613 8813662 -13609165 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 652 31 26 0 0 chrX 8814168 8814206 -13608621 + AT_rich Low_complexity Low_complexity 1 38 0 1 652 24 0 0 0 chrX 8814244 8814268 -13608559 + AT_rich Low_complexity Low_complexity 1 24 0 1 652 282 116 0 0 chrX 8814830 8814873 -13607954 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 652 316 40 20 20 chrX 8815023 8815074 -13607753 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 652 21 0 0 0 chrX 8815322 8815343 -13607484 + AT_rich Low_complexity Low_complexity 1 21 0 1 652 237 183 27 27 chrX 8815406 8815479 -13607348 + T-rich Low_complexity Low_complexity 5 77 0 1 652 360 64 0 0 chrX 8815747 8815794 -13607033 + (CAGTT)n Simple_repeat Simple_repeat 2 48 0 1 652 3003 0 0 25 chrX 8816417 8816777 -13606050 + LINEJ1_DM LINE Jockey 4670 5020 0 1 652 42 36 0 0 chrX 8817134 8817190 -13605637 + AT_rich Low_complexity Low_complexity 1 56 0 1 652 225 0 0 0 chrX 8818610 8818635 -13604192 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 652 202 317 10 0 chrX 8818858 8818959 -13603868 + GA-rich Low_complexity Low_complexity 5 106 0 1 652 294 132 0 0 chrX 8818983 8819036 -13603791 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 652 23 0 0 0 chrX 8820175 8820198 -13602629 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 27 0 0 0 chrX 8820972 8820999 -13601828 + AT_rich Low_complexity Low_complexity 1 27 0 1 652 204 184 0 0 chrX 8821334 8821383 -13601444 + A-rich Low_complexity Low_complexity 1 49 0 1 652 4881 42 8 6 chrX 8821674 8822319 -13600508 + FB4_DM DNA Tc1 1 646 -3443 1 652 693 102 8 16 chrX 8822743 8822872 -13599955 - FB4_DM DNA Tc1 -3443 646 519 1 652 8530 25 30 5 chrX 8822779 8823882 -13598945 + FB4_DM DNA Tc1 2960 4089 0 1 652 291 122 0 0 chrX 8826922 8826971 -13595856 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 652 29 28 0 0 chrX 8827108 8827144 -13595683 + AT_rich Low_complexity Low_complexity 1 36 0 1 652 22 35 0 0 chrX 8827713 8827742 -13595085 + AT_rich Low_complexity Low_complexity 1 29 0 1 652 207 196 0 0 chrX 8829203 8829249 -13593578 + (ATG)n Simple_repeat Simple_repeat 3 48 0 1 652 338 0 0 23 chrX 8830730 8830773 -13592054 + (CTATA)n Simple_repeat Simple_repeat 1 42 0 1 652 23 0 0 0 chrX 8833743 8833766 -13589061 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 300 70 0 0 chrX 8834717 8834760 -13588067 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 652 214 254 0 0 chrX 8836741 8836808 -13586019 + A-rich Low_complexity Low_complexity 1 67 0 1 652 28 0 0 0 chrX 8837298 8837326 -13585501 + AT_rich Low_complexity Low_complexity 1 28 0 1 652 201 163 0 65 chrX 8838069 8838115 -13584712 + (CCCCAA)n Simple_repeat Simple_repeat 2 44 0 1 652 180 0 0 0 chrX 8838984 8839004 -13583823 + (C)n Simple_repeat Simple_repeat 1 20 0 1 652 23 33 0 0 chrX 8839259 8839289 -13583538 + AT_rich Low_complexity Low_complexity 1 30 0 1 652 22 0 0 0 chrX 8841256 8841278 -13581549 + AT_rich Low_complexity Low_complexity 1 22 0 1 652 180 0 0 0 chrX 8841395 8841415 -13581412 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 652 40 37 0 0 chrX 8842387 8842441 -13580386 + AT_rich Low_complexity Low_complexity 1 54 0 1 652 3931 0 0 0 chrX 8842846 8843274 -13579553 + ROO_LTR LTR Pao 1 428 0 1 652 41211 1 2 0 chrX 8843274 8847913 -13574914 + ROO_I LTR Pao 1 4648 -3608 1 652 17474 0 1 0 chrX 8847899 8849870 -13572957 + ROO_I LTR Pao 6285 8256 0 1 652 3931 0 0 0 chrX 8849870 8850298 -13572529 + ROO_LTR LTR Pao 1 428 0 1 652 228 35 0 0 chrX 8851391 8851420 -13571407 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 652 41 0 0 0 chrX 8852590 8852631 -13570196 + AT_rich Low_complexity Low_complexity 1 41 0 1 652 22 0 0 0 chrX 8852935 8852957 -13569870 + AT_rich Low_complexity Low_complexity 1 22 0 1 652 216 0 0 0 chrX 8852976 8853000 -13569827 + (ATG)n Simple_repeat Simple_repeat 1 24 0 1 652 527 261 43 35 chrX 8853506 8853788 -13569039 + XDMR_DM Unknown Unknown 77 360 0 1 652 1018 258 34 11 chrX 8853543 8853892 -13568935 - SAR_DM Satellite Satellite -535 937 581 1 652 378 246 34 0 chrX 8853793 8853911 -13568916 + XDMR_DM Unknown Unknown 6 127 -233 1 652 180 125 0 0 chrX 8854355 8854387 -13568440 + (GAATG)n Simple_repeat Simple_repeat 5 36 0 1 652 21 0 0 0 chrX 8855133 8855154 -13567673 + AT_rich Low_complexity Low_complexity 1 21 0 1 652 27 0 0 0 chrX 8856156 8856183 -13566644 + AT_rich Low_complexity Low_complexity 1 27 0 1 652 26 30 0 0 chrX 8856281 8856314 -13566513 + AT_rich Low_complexity Low_complexity 1 33 0 1 652 216 0 0 0 chrX 8857224 8857248 -13565579 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 652 23 0 0 0 chrX 8857883 8857906 -13564921 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 221 171 0 0 chrX 8858069 8858110 -13564717 + T-rich Low_complexity Low_complexity 1 41 0 1 652 183 42 0 0 chrX 8858583 8858607 -13564220 + (A)n Simple_repeat Simple_repeat 1 24 0 1 652 252 122 0 0 chrX 8859485 8859526 -13563301 + (CGAAA)n Simple_repeat Simple_repeat 3 43 0 1 652 189 139 0 0 chrX 8861115 8861158 -13561669 + (A)n Simple_repeat Simple_repeat 1 43 0 1 652 22 0 0 0 chrX 8862049 8862071 -13560756 + AT_rich Low_complexity Low_complexity 1 22 0 1 652 498 17 0 0 chrX 8862914 8862973 -13559854 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 652 330 26 0 0 chrX 8863206 8863245 -13559582 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1 652 216 0 0 0 chrX 8864131 8864155 -13558672 + (ATG)n Simple_repeat Simple_repeat 1 24 0 1 652 180 125 0 0 chrX 8865370 8865402 -13557425 + (A)n Simple_repeat Simple_repeat 1 32 0 1 652 24 32 0 0 chrX 8867457 8867488 -13555339 + AT_rich Low_complexity Low_complexity 1 31 0 1 652 28 48 0 0 chrX 8868702 8868744 -13554083 + AT_rich Low_complexity Low_complexity 1 42 0 1 652 222 62 0 0 chrX 8868952 8868984 -13553843 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 652 195 69 0 0 chrX 8869094 8869123 -13553704 + (T)n Simple_repeat Simple_repeat 1 29 0 1 652 23 0 0 0 chrX 8870378 8870401 -13552426 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 207 167 0 0 chrX 8871311 8871347 -13551480 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 652 31 26 0 0 chrX 8873441 8873479 -13549348 + AT_rich Low_complexity Low_complexity 1 38 0 1 652 391 271 104 24 chrX 8874163 8874375 -13548452 + XDMR Unknown Unknown 115 343 -18 1 652 2628 209 25 20 chrX 8874190 8874903 -13547924 - SAR_DM Satellite Satellite -556 916 200 1 652 371 21 21 0 chrX 8876224 8876272 -13546555 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 652 189 154 0 0 chrX 8876440 8876479 -13546348 + (CAGT)n Simple_repeat Simple_repeat 2 40 0 1 652 24 53 0 0 chrX 8877610 8877648 -13545179 + AT_rich Low_complexity Low_complexity 1 38 0 1 652 26 30 0 0 chrX 8880394 8880427 -13542400 + AT_rich Low_complexity Low_complexity 1 33 0 1 652 216 0 0 0 chrX 8880737 8880761 -13542066 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 652 189 0 0 0 chrX 8882408 8882429 -13540398 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 652 27 0 0 0 chrX 8884003 8884030 -13538797 + AT_rich Low_complexity Low_complexity 1 27 0 1 652 2460 214 36 6 chrX 8884030 8884703 -13538124 + SAR_DM Satellite Satellite 224 916 -556 1 652 751 207 21 17 chrX 8884501 8884737 -13538090 - XDMR Unknown Unknown 0 361 125 1 652 21 95 0 0 chrX 8885127 8885190 -13537637 + AT_rich Low_complexity Low_complexity 1 63 0 1 652 189 0 0 0 chrX 8886033 8886054 -13536773 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1 652 195 42 0 0 chrX 8886433 8886457 -13536370 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 652 264 77 0 0 chrX 8888755 8888794 -13534033 + (CGAAT)n Simple_repeat Simple_repeat 3 41 0 1 652 189 74 0 0 chrX 8889091 8889118 -13533709 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 652 390 139 0 0 chrX 8889313 8889385 -13533442 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 652 189 121 0 0 chrX 8889603 8889636 -13533191 + (T)n Simple_repeat Simple_repeat 1 33 0 1 652 216 97 0 0 chrX 8890395 8890426 -13532401 + (T)n Simple_repeat Simple_repeat 1 31 0 1 652 25 31 0 0 chrX 8890987 8891019 -13531808 + AT_rich Low_complexity Low_complexity 1 32 0 1 652 225 159 0 0 chrX 8891524 8891568 -13531259 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 652 22 56 0 0 chrX 8892919 8892955 -13529872 + AT_rich Low_complexity Low_complexity 1 36 0 1 652 352 177 7 65 chrX 8893800 8893939 -13528888 + (CAA)n Simple_repeat Simple_repeat 1 131 0 1 652 217 272 0 32 chrX 8894087 8894182 -13528645 + (CAA)n Simple_repeat Simple_repeat 3 94 0 1 652 25 65 0 0 chrX 8897123 8897169 -13525658 + AT_rich Low_complexity Low_complexity 1 46 0 1 652 24 0 0 0 chrX 8898056 8898080 -13524747 + AT_rich Low_complexity Low_complexity 1 24 0 1 652 22 35 0 0 chrX 8898634 8898663 -13524164 + AT_rich Low_complexity Low_complexity 1 29 0 1 652 224 156 22 0 chrX 8898866 8898911 -13523916 + (CAA)n Simple_repeat Simple_repeat 3 48 0 1 652 260 104 42 0 chrX 8899031 8899079 -13523748 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1 652 374 269 0 0 chrX 8899359 8899489 -13523338 - XDMR Unknown Unknown -231 130 1 1 652 2850 230 19 25 chrX 8899381 8900400 -13522427 + SAR_DM Satellite Satellite 248 1260 -212 1 652 183 220 0 0 chrX 8901611 8901661 -13521166 + (CCG)n Simple_repeat Simple_repeat 3 52 0 1 652 22 56 0 0 chrX 8901794 8901830 -13520997 + AT_rich Low_complexity Low_complexity 1 36 0 1 652 26 0 0 0 chrX 8903142 8903168 -13519659 + AT_rich Low_complexity Low_complexity 1 26 0 1 652 23 0 0 0 chrX 8903509 8903532 -13519295 + AT_rich Low_complexity Low_complexity 1 23 0 1 652 285 51 0 0 chrX 8904289 8904328 -13518499 + (TCC)n Simple_repeat Simple_repeat 1 39 0 1 652 189 0 0 0 chrX 8905117 8905138 -13517689 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 652 189 121 0 0 chrX 8906778 8906811 -13516016 + (A)n Simple_repeat Simple_repeat 1 33 0 1 652 26 30 0 0 chrX 8907149 8907182 -13515645 + AT_rich Low_complexity Low_complexity 1 33 0 1 652 252 86 0 0 chrX 8907534 8907569 -13515258 + (A)n Simple_repeat Simple_repeat 1 35 0 1 652 231 192 0 103 chrX 8907724 8907840 -13514987 + ROO_I LTR Pao 640 743 -7513 1 652 234 176 13 63 chrX 8907939 8908018 -13514809 + ROO_I LTR Pao 655 729 -7527 1 652 288 77 0 0 chrX 8908138 8908177 -13514650 + (CAG)n Simple_repeat Simple_repeat 3 41 0 1 652 308 200 12 0 chrX 8908280 8908360 -13514467 + ROO_I LTR Pao 664 744 -7512 1 652 222 45 44 22 chrX 8908803 8908848 -13513979 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1 652 198 71 0 0 chrX 8909254 8909282 -13513545 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 1 652 2664 196 54 14 chrX 8910773 8911586 -13511241 - SAR_DM Satellite Satellite -757 845 1 1 652 35 0 0 0 chrX 8911652 8911687 -13511140 + AT_rich Low_complexity Low_complexity 1 35 0 1 652 189 0 0 0 chrX 8911795 8911816 -13511011 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 652 206 250 0 0 chrX 8912702 8912754 -13510073 + A-rich Low_complexity Low_complexity 1 52 0 1 653 213 132 0 0 chrX 8913553 8913591 -13509236 + (TGG)n Simple_repeat Simple_repeat 2 39 0 1 653 30 27 0 0 chrX 8913829 8913866 -13508961 + AT_rich Low_complexity Low_complexity 1 37 0 1 653 23 33 0 0 chrX 8914149 8914179 -13508648 + AT_rich Low_complexity Low_complexity 1 30 0 1 653 26 74 0 0 chrX 8916698 8916752 -13506075 + AT_rich Low_complexity Low_complexity 1 54 0 1 653 204 149 0 0 chrX 8917003 8917050 -13505777 + (CCAA)n Simple_repeat Simple_repeat 1 47 0 1 653 281 26 26 0 chrX 8917229 8917267 -13505560 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 653 186 43 0 0 chrX 8917591 8917614 -13505213 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 653 25 51 0 0 chrX 8917704 8917743 -13505084 + AT_rich Low_complexity Low_complexity 1 39 0 1 653 223 284 0 0 chrX 8917887 8917954 -13504873 + CT-rich Low_complexity Low_complexity 1 67 0 1 653 26 0 0 0 chrX 8919827 8919853 -13502974 + AT_rich Low_complexity Low_complexity 1 26 0 1 653 279 0 0 0 chrX 8920005 8920036 -13502791 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 653 180 0 0 0 chrX 8920288 8920308 -13502519 + (CTA)n Simple_repeat Simple_repeat 1 20 0 1 653 189 0 0 0 chrX 8921036 8921057 -13501770 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 653 27 62 0 0 chrX 8921428 8921476 -13501351 + AT_rich Low_complexity Low_complexity 1 48 0 1 653 266 169 0 15 chrX 8922116 8922182 -13500645 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 653 180 111 0 0 chrX 8922355 8922382 -13500445 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 653 243 88 0 0 chrX 8922576 8922610 -13500217 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 653 252 0 0 0 chrX 8922795 8922823 -13500004 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 653 23 33 0 0 chrX 8923018 8923048 -13499779 + AT_rich Low_complexity Low_complexity 1 30 0 1 653 32 57 0 0 chrX 8923811 8923864 -13498963 + AT_rich Low_complexity Low_complexity 1 53 0 1 653 27 29 0 0 chrX 8924330 8924364 -13498463 + AT_rich Low_complexity Low_complexity 1 34 0 1 653 28 29 0 0 chrX 8924799 8924834 -13497993 + AT_rich Low_complexity Low_complexity 1 35 0 1 653 36 0 0 0 chrX 8925687 8925723 -13497104 + AT_rich Low_complexity Low_complexity 1 36 0 1 653 546 224 28 28 chrX 8927889 8928105 -13494722 + XDMR Unknown Unknown 146 361 0 1 653 1356 194 6 6 chrX 8927928 8928250 -13494577 - SAR_DM Satellite Satellite -581 891 570 1 653 205 195 0 0 chrX 8929273 8929314 -13493513 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 653 2034 211 39 23 chrX 8930876 8931522 -13491305 + SAR_DM Satellite Satellite 226 881 -591 1 653 22 0 0 0 chrX 8931688 8931710 -13491117 + AT_rich Low_complexity Low_complexity 1 22 0 1 653 207 100 0 0 chrX 8933994 8934024 -13488803 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 653 180 125 0 0 chrX 8936491 8936523 -13486304 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 653 213 108 0 0 chrX 8936589 8936626 -13486201 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 653 207 69 0 0 chrX 8936920 8936949 -13485878 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 653 233 210 0 0 chrX 8938299 8938361 -13484466 + A-rich Low_complexity Low_complexity 1 62 0 1 653 237 159 0 0 chrX 8939041 8939085 -13483742 + (CAGAT)n Simple_repeat Simple_repeat 5 48 0 1 653 30 0 0 0 chrX 8939434 8939464 -13483363 + AT_rich Low_complexity Low_complexity 1 30 0 1 653 180 77 0 0 chrX 8946863 8946889 -13475938 + (CAT)n Simple_repeat Simple_repeat 1 26 0 1 653 216 200 0 0 chrX 8946972 8947032 -13475795 + (CAG)n Simple_repeat Simple_repeat 2 61 0 1 653 36 0 0 0 chrX 8948372 8948408 -13474419 + AT_rich Low_complexity Low_complexity 1 36 0 1 653 22 0 0 0 chrX 8948577 8948599 -13474228 + AT_rich Low_complexity Low_complexity 1 22 0 1 653 30 89 0 0 chrX 8948634 8948713 -13474114 + AT_rich Low_complexity Low_complexity 1 79 0 1 653 21 36 0 0 chrX 8948958 8948986 -13473841 + AT_rich Low_complexity Low_complexity 1 28 0 1 653 241 304 0 0 chrX 8949403 8949495 -13473332 + (CTG)n Simple_repeat Simple_repeat 1 92 0 1 653 362 174 0 34 chrX 8949704 8949823 -13473004 - ROO_I LTR Pao -7501 755 641 1 653 279 114 0 0 chrX 8949912 8949956 -13472871 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 653 22 70 0 0 chrX 8950844 8950887 -13471940 + AT_rich Low_complexity Low_complexity 1 43 0 1 653 446 180 27 9 chrX 8951164 8951276 -13471551 - ROO_I LTR Pao -7500 756 643 1 653 210 91 0 0 chrX 8951278 8951311 -13471516 + (CTG)n Simple_repeat Simple_repeat 1 33 0 1 653 201 111 0 53 chrX 8951559 8951597 -13471230 + (CTG)n Simple_repeat Simple_repeat 1 36 0 1 653 221 149 0 41 chrX 8953014 8953063 -13469764 + (ATGGTG)n Simple_repeat Simple_repeat 3 49 0 1 653 28 0 0 0 chrX 8956679 8956707 -13466120 + AT_rich Low_complexity Low_complexity 1 28 0 1 653 28 48 0 0 chrX 8956834 8956876 -13465951 + AT_rich Low_complexity Low_complexity 1 42 0 1 653 23 0 0 0 chrX 8957301 8957324 -13465503 + AT_rich Low_complexity Low_complexity 1 23 0 1 653 342 45 0 0 chrX 8957484 8957528 -13465299 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 653 273 155 0 0 chrX 8957612 8957670 -13465157 + T-rich Low_complexity Low_complexity 1 58 0 1 653 180 0 0 0 chrX 8957935 8957955 -13464872 + (T)n Simple_repeat Simple_repeat 1 20 0 1 653 270 125 0 0 chrX 8958252 8958300 -13464527 + (TGGA)n Simple_repeat Simple_repeat 4 51 0 1 653 210 150 0 0 chrX 8958528 8958568 -13464259 + (TTTTTA)n Simple_repeat Simple_repeat 4 43 0 1 653 255 140 0 0 chrX 8960023 8960073 -13462754 + (T)n Simple_repeat Simple_repeat 1 50 0 1 653 228 174 22 0 chrX 8960188 8960234 -13462593 + A-rich Low_complexity Low_complexity 4 50 0 1 653 249 33 0 0 chrX 8960970 8961000 -13461827 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 653 201 94 0 0 chrX 8961874 8961906 -13460921 + (A)n Simple_repeat Simple_repeat 1 32 0 1 653 33 73 0 0 chrX 8962685 8962753 -13460074 + AT_rich Low_complexity Low_complexity 1 68 0 1 653 180 0 0 0 chrX 8962866 8962886 -13459941 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 653 207 0 0 0 chrX 8964120 8964143 -13458684 + (A)n Simple_repeat Simple_repeat 1 23 0 1 653 242 276 0 31 chrX 8964375 8964472 -13458355 + A-rich Low_complexity Low_complexity 4 97 0 1 653 32 26 0 0 chrX 8964737 8964776 -13458051 + AT_rich Low_complexity Low_complexity 1 39 0 1 653 577 249 5 15 chrX 8966111 8966307 -13456520 + XDMR_DM Unknown Unknown 166 359 -1 1 653 2122 225 34 23 chrX 8966134 8966785 -13456042 - SAR_DM Satellite Satellite -615 857 200 1 653 254 291 0 12 chrX 8967385 8967465 -13455362 + (CAGA)n Simple_repeat Simple_repeat 4 82 0 1 653 192 77 0 0 chrX 8968494 8968520 -13454307 + (TATG)n Simple_repeat Simple_repeat 2 27 0 1 653 21 0 0 0 chrX 8969243 8969264 -13453563 + AT_rich Low_complexity Low_complexity 1 21 0 1 653 267 54 0 0 chrX 8969394 8969431 -13453396 + (TTGG)n Simple_repeat Simple_repeat 4 40 0 1 653 27 0 0 0 chrX 8969757 8969784 -13453043 + AT_rich Low_complexity Low_complexity 1 27 0 1 653 180 0 0 0 chrX 8969925 8969945 -13452882 + (T)n Simple_repeat Simple_repeat 1 20 0 1 653 214 186 0 0 chrX 8971700 8971743 -13451084 + A-rich Low_complexity Low_complexity 1 43 0 1 653 27 29 0 0 chrX 8972131 8972165 -13450662 + AT_rich Low_complexity Low_complexity 1 34 0 1 653 212 227 0 0 chrX 8972564 8972608 -13450219 + (CGG)n Simple_repeat Simple_repeat 1 44 0 1 653 27 49 0 0 chrX 8975117 8975158 -13447669 + AT_rich Low_complexity Low_complexity 1 41 0 1 653 255 125 0 0 chrX 8976270 8976310 -13446517 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 653 27 29 0 0 chrX 8984273 8984307 -13438520 + AT_rich Low_complexity Low_complexity 1 34 0 1 653 2571 209 20 11 chrX 8986915 8987562 -13435265 - SAR_DM Satellite Satellite -594 878 226 1 653 266 291 0 0 chrX 8989727 8989806 -13433021 - ROO_I LTR Pao -7522 734 656 1 653 282 106 0 0 chrX 8993507 8993554 -13429273 + (TTG)n Simple_repeat Simple_repeat 3 49 0 1 653 21 0 0 0 chrX 8993555 8993576 -13429251 + AT_rich Low_complexity Low_complexity 1 21 0 1 653 26 0 0 0 chrX 8993759 8993785 -13429042 + AT_rich Low_complexity Low_complexity 1 26 0 1 653 236 68 0 119 chrX 8993907 8993991 -13428836 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 653 267 79 0 0 chrX 8994236 8994274 -13428553 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 653 225 209 0 69 chrX 8994441 8994513 -13428314 + A-rich Low_complexity Low_complexity 3 69 0 1 653 616 200 0 0 chrX 9000789 9000919 -13421908 - SAR_DM Satellite Satellite -745 727 598 1 653 500 208 40 43 chrX 9000802 9000985 -13421842 + XDMR Unknown Unknown 1 157 -204 1 653 212 244 0 0 chrX 9004023 9004068 -13418759 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 653 246 179 0 0 chrX 9004728 9004784 -13418043 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 653 218 125 0 24 chrX 9004912 9004953 -13417874 + (TAAAAA)n Simple_repeat Simple_repeat 5 44 0 1 653 224 59 0 29 chrX 9005585 9005620 -13417207 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 653 21 71 0 0 chrX 9006574 9006616 -13416211 + AT_rich Low_complexity Low_complexity 1 42 0 1 653 24 32 0 0 chrX 9006979 9007010 -13415817 + AT_rich Low_complexity Low_complexity 1 31 0 1 653 234 0 0 0 chrX 9007377 9007403 -13415424 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 653 189 0 0 0 chrX 9010444 9010465 -13412362 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 653 180 77 0 0 chrX 9010673 9010699 -13412128 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 653 198 71 0 0 chrX 9010865 9010893 -13411934 + (GGAAA)n Simple_repeat Simple_repeat 3 30 0 1 653 228 86 0 0 chrX 9011158 9011193 -13411634 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 653 21 0 0 0 chrX 9011234 9011255 -13411572 + AT_rich Low_complexity Low_complexity 1 21 0 1 653 225 131 49 0 chrX 9011467 9011528 -13411299 + (ATG)n Simple_repeat Simple_repeat 1 64 0 1 653 216 67 0 0 chrX 9011561 9011591 -13411236 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1 653 230 283 0 0 chrX 9012779 9012832 -13409995 + CT-rich Low_complexity Low_complexity 3 55 0 1 653 260 219 27 14 chrX 9014555 9014629 -13408198 + A-rich Low_complexity Low_complexity 3 77 0 1 653 28 79 0 0 chrX 9015989 9016052 -13406775 + AT_rich Low_complexity Low_complexity 1 63 0 1 653 204 273 0 0 chrX 9016993 9017070 -13405757 + A-rich Low_complexity Low_complexity 1 77 0 1 653 240 86 0 0 chrX 9017622 9017657 -13405170 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 653 27 0 0 0 chrX 9017698 9017725 -13405102 + AT_rich Low_complexity Low_complexity 1 27 0 1 653 204 40 0 0 chrX 9017857 9017882 -13404945 + (T)n Simple_repeat Simple_repeat 1 25 0 1 653 249 33 0 0 chrX 9018227 9018257 -13404570 + (TTTAG)n Simple_repeat Simple_repeat 4 33 0 1 653 206 241 0 0 chrX 9018395 9018449 -13404378 + T-rich Low_complexity Low_complexity 1 54 0 1 653 301 86 17 17 chrX 9018675 9018734 -13404093 + (TATAA)n Simple_repeat Simple_repeat 1 59 0 1 653 193 79 29 87 chrX 9018823 9018892 -13403935 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 1 653 231 88 0 0 chrX 9019016 9019050 -13403777 + (ATTCG)n Simple_repeat Simple_repeat 2 35 0 1 653 242 68 45 0 chrX 9019163 9019207 -13403620 + (TTTTTG)n Simple_repeat Simple_repeat 1 46 0 1 653 21 36 0 0 chrX 9019968 9019996 -13402831 + AT_rich Low_complexity Low_complexity 1 28 0 1 653 258 116 0 0 chrX 9023366 9023409 -13399418 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 1 653 212 246 15 0 chrX 9024213 9024278 -13398549 + (CCCA)n Simple_repeat Simple_repeat 3 68 0 1 653 276 111 0 0 chrX 9024424 9024469 -13398358 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 1 653 213 139 0 0 chrX 9024569 9024612 -13398215 + (CCA)n Simple_repeat Simple_repeat 1 43 0 1 653 186 167 0 0 chrX 9025121 9025157 -13397670 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 1 653 186 71 0 0 chrX 9025647 9025675 -13397152 + (ATTTG)n Simple_repeat Simple_repeat 3 30 0 1 653 225 94 0 0 chrX 9026742 9026774 -13396053 + (CAA)n Simple_repeat Simple_repeat 3 34 0 1 653 200 185 0 18 chrX 9028468 9028523 -13394304 + (CTG)n Simple_repeat Simple_repeat 3 56 0 1 653 219 69 0 0 chrX 9030063 9030092 -13392735 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 653 223 178 0 0 chrX 9030829 9030874 -13391953 + A-rich Low_complexity Low_complexity 2 46 0 1 653 202 188 42 0 chrX 9030912 9030960 -13391867 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 1 653 428 264 11 11 chrX 9031584 9031760 -13391067 - XDMR_DM Unknown Unknown -179 181 6 1 653 2647 243 34 46 chrX 9031605 9033045 -13389782 + SAR_DM Satellite Satellite 1 1423 -204 1 653 200 258 16 0 chrX 9033270 9033332 -13389495 + C-rich Low_complexity Low_complexity 5 67 0 1 653 21 0 0 0 chrX 9034651 9034672 -13388155 + AT_rich Low_complexity Low_complexity 1 21 0 1 653 192 40 0 0 chrX 9035690 9035715 -13387112 + (CATA)n Simple_repeat Simple_repeat 2 26 0 1 653 229 191 0 0 chrX 9040953 9041000 -13381827 + (TGG)n Simple_repeat Simple_repeat 1 47 0 1 653 276 30 0 0 chrX 9041310 9041343 -13381484 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1 653 228 35 0 0 chrX 9041596 9041625 -13381202 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 653 22 0 0 0 chrX 9041766 9041788 -13381039 + AT_rich Low_complexity Low_complexity 1 22 0 1 653 24 0 0 0 chrX 9042034 9042058 -13380769 + AT_rich Low_complexity Low_complexity 1 24 0 1 653 221 213 0 47 chrX 9043521 9043585 -13379242 + (CGG)n Simple_repeat Simple_repeat 2 62 0 1 654 278 244 0 66 chrX 9046598 9046734 -13376093 + T-rich Low_complexity Low_complexity 6 132 0 1 654 189 74 0 0 chrX 9046821 9046848 -13375979 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 654 236 111 22 0 chrX 9047166 9047211 -13375616 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 654 378 121 0 0 chrX 9047294 9047360 -13375467 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 654 23 0 0 0 chrX 9050190 9050213 -13372614 + AT_rich Low_complexity Low_complexity 1 23 0 1 654 22 35 0 0 chrX 9050830 9050859 -13371968 + AT_rich Low_complexity Low_complexity 1 29 0 1 654 21 57 0 0 chrX 9053359 9053394 -13369433 + AT_rich Low_complexity Low_complexity 1 35 0 1 654 795 157 95 7 chrX 9054251 9054399 -13368428 - DNAREP1_DM LINE Penelope 0 594 434 1 654 287 191 15 0 chrX 9054389 9054457 -13368370 + DNAREP1_DM LINE Penelope 526 594 0 1 654 39 22 0 0 chrX 9057096 9057142 -13365685 + AT_rich Low_complexity Low_complexity 1 46 0 1 654 234 0 0 0 chrX 9058770 9058796 -13364031 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 654 21 0 0 0 chrX 9059247 9059268 -13363559 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 288 53 0 0 chrX 9060224 9060262 -13362565 + (CAG)n Simple_repeat Simple_repeat 2 39 0 1 654 273 172 0 0 chrX 9062313 9062371 -13360456 + ROO_I LTR Pao 686 743 -7513 1 654 307 200 24 73 chrX 9062371 9062495 -13360332 + ROO_I LTR Pao 639 756 -7500 1 654 231 156 19 103 chrX 9062703 9062810 -13360017 + ROO_I LTR Pao 641 738 -7518 1 654 252 154 0 0 chrX 9063325 9063377 -13359450 + T-rich Low_complexity Low_complexity 1 52 0 1 654 250 252 0 46 chrX 9064938 9065046 -13357781 + ROO_I LTR Pao 641 743 -7513 1 654 272 193 21 64 chrX 9065692 9065786 -13357041 + A-rich Low_complexity Low_complexity 4 93 0 1 654 224 77 26 0 chrX 9065903 9065942 -13356885 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 654 189 121 0 0 chrX 9066038 9066071 -13356756 + (A)n Simple_repeat Simple_repeat 1 33 0 1 654 200 114 29 0 chrX 9066963 9066998 -13355829 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 654 492 81 0 0 chrX 9067070 9067144 -13355683 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 654 261 151 0 0 chrX 9067418 9067471 -13355356 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 654 313 75 0 36 chrX 9067818 9067873 -13354954 + (TTA)n Simple_repeat Simple_repeat 2 54 0 1 654 315 141 0 0 chrX 9068114 9068178 -13354649 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 654 25 0 0 0 chrX 9068218 9068243 -13354584 + AT_rich Low_complexity Low_complexity 1 25 0 1 654 198 0 0 0 chrX 9069015 9069037 -13353790 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 654 184 186 34 0 chrX 9069241 9069300 -13353527 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 654 198 91 0 0 chrX 9070003 9070036 -13352791 + (TTA)n Simple_repeat Simple_repeat 3 35 0 1 654 327 49 0 0 chrX 9070042 9070083 -13352744 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 654 252 150 0 62 chrX 9072612 9072676 -13350151 + A-rich Low_complexity Low_complexity 6 65 0 1 654 336 48 0 0 chrX 9073859 9073901 -13348926 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 654 212 254 0 0 chrX 9074848 9074911 -13347916 + A-rich Low_complexity Low_complexity 1 63 0 1 654 270 0 0 0 chrX 9074953 9074983 -13347844 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 654 285 29 0 0 chrX 9076122 9076156 -13346671 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 654 203 103 0 25 chrX 9077194 9077234 -13345593 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 654 189 154 0 0 chrX 9077293 9077332 -13345495 + A-rich Low_complexity Low_complexity 1 39 0 1 654 232 137 0 38 chrX 9077459 9077512 -13345315 + A-rich Low_complexity Low_complexity 3 53 0 1 654 405 102 0 0 chrX 9077943 9078002 -13344825 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 654 203 200 0 0 chrX 9078258 9078293 -13344534 + A-rich Low_complexity Low_complexity 2 36 0 1 654 210 37 0 0 chrX 9078602 9078629 -13344198 + (CAACT)n Simple_repeat Simple_repeat 2 28 0 1 654 217 250 0 0 chrX 9078784 9078828 -13343999 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1 654 249 139 0 0 chrX 9079117 9079160 -13343667 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 654 216 0 0 0 chrX 9080132 9080156 -13342671 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 654 205 159 0 43 chrX 9080179 9080225 -13342602 + A-rich Low_complexity Low_complexity 3 46 0 1 654 23 54 0 0 chrX 9081890 9081927 -13340900 + AT_rich Low_complexity Low_complexity 1 37 0 1 654 246 180 0 0 chrX 9082703 9082764 -13340063 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 654 302 80 20 0 chrX 9082914 9082964 -13339863 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 654 26 30 0 0 chrX 9083188 9083221 -13339606 + AT_rich Low_complexity Low_complexity 1 33 0 1 654 600 40 0 0 chrX 9084839 9084914 -13337913 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 654 32 0 0 0 chrX 9085220 9085252 -13337575 + AT_rich Low_complexity Low_complexity 1 32 0 1 654 207 25 49 24 chrX 9094887 9094928 -13327899 + (TTA)n Simple_repeat Simple_repeat 3 44 0 1 654 21 71 0 0 chrX 9096203 9096245 -13326582 + AT_rich Low_complexity Low_complexity 1 42 0 1 654 23 33 0 0 chrX 9096272 9096302 -13326525 + AT_rich Low_complexity Low_complexity 1 30 0 1 654 21 36 0 0 chrX 9096533 9096561 -13326266 + AT_rich Low_complexity Low_complexity 1 28 0 1 654 546 205 35 39 chrX 9097828 9098031 -13324796 - XDMR Unknown Unknown -159 202 1 1 654 2676 166 10 15 chrX 9097889 9098489 -13324338 + SAR_DM Satellite Satellite 218 814 -658 1 654 216 200 0 0 chrX 9098897 9098967 -13323860 + (CAGAGA)n Simple_repeat Simple_repeat 3 72 0 1 654 204 125 0 0 chrX 9099461 9099493 -13323334 + (CGAAT)n Simple_repeat Simple_repeat 3 34 0 1 654 249 108 0 0 chrX 9099629 9099666 -13323161 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 654 30 0 0 0 chrX 9100200 9100230 -13322597 + AT_rich Low_complexity Low_complexity 1 30 0 1 654 32 26 0 0 chrX 9101546 9101585 -13321242 + AT_rich Low_complexity Low_complexity 1 39 0 1 654 34 0 0 0 chrX 9102564 9102598 -13320229 + AT_rich Low_complexity Low_complexity 1 34 0 1 654 201 250 0 0 chrX 9106196 9106256 -13316571 + A-rich Low_complexity Low_complexity 1 60 0 1 654 189 0 0 0 chrX 9106412 9106433 -13316394 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 654 24 0 0 0 chrX 9106621 9106645 -13316182 + AT_rich Low_complexity Low_complexity 1 24 0 1 654 207 0 0 0 chrX 9107345 9107368 -13315459 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 654 201 154 0 0 chrX 9108453 9108492 -13314335 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 654 201 39 0 0 chrX 9110056 9110082 -13312745 + (CAG)n Simple_repeat Simple_repeat 2 27 0 1 654 23 0 0 0 chrX 9110540 9110563 -13312264 + AT_rich Low_complexity Low_complexity 1 23 0 1 654 23 0 0 0 chrX 9110820 9110843 -13311984 + AT_rich Low_complexity Low_complexity 1 23 0 1 654 25 31 0 0 chrX 9111690 9111722 -13311105 + AT_rich Low_complexity Low_complexity 1 32 0 1 654 255 31 0 0 chrX 9111729 9111761 -13311066 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 654 27 96 0 0 chrX 9111949 9112032 -13310795 + AT_rich Low_complexity Low_complexity 1 83 0 1 654 23 0 0 0 chrX 9115567 9115590 -13307237 + AT_rich Low_complexity Low_complexity 1 23 0 1 654 29 28 0 0 chrX 9116602 9116638 -13306189 + AT_rich Low_complexity Low_complexity 1 36 0 1 654 243 236 0 14 chrX 9117323 9117396 -13305431 + (CGG)n Simple_repeat Simple_repeat 3 74 0 1 654 213 200 0 0 chrX 9118330 9118370 -13304457 + (ATG)n Simple_repeat Simple_repeat 1 40 0 1 654 21 0 0 0 chrX 9118972 9118993 -13303834 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 225 0 0 0 chrX 9120098 9120123 -13302704 + (CAT)n Simple_repeat Simple_repeat 2 26 0 1 654 192 77 0 0 chrX 9120782 9120808 -13302019 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 654 741 239 9 9 chrX 9129077 9129292 -13293535 + XDMR_DM Unknown Unknown 137 351 -9 1 654 2772 189 12 13 chrX 9129106 9129788 -13293039 - SAR_DM Satellite Satellite -593 879 199 1 654 402 85 0 0 chrX 9130973 9131032 -13291795 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 654 206 229 16 16 chrX 9132858 9132920 -13289907 + (CGG)n Simple_repeat Simple_repeat 2 63 0 1 654 219 69 0 0 chrX 9140787 9140816 -13282011 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 654 180 0 0 0 chrX 9144016 9144036 -13278791 + (TTA)n Simple_repeat Simple_repeat 1 20 0 1 654 201 238 0 45 chrX 9145262 9145328 -13277499 + C-rich Low_complexity Low_complexity 2 64 0 1 654 21 57 0 0 chrX 9149048 9149083 -13273744 + AT_rich Low_complexity Low_complexity 1 35 0 1 654 181 109 21 21 chrX 9149398 9149445 -13273382 + A-rich Low_complexity Low_complexity 2 48 0 1 654 27 29 0 0 chrX 9150071 9150105 -13272722 + AT_rich Low_complexity Low_complexity 1 34 0 1 654 25 0 0 0 chrX 9150247 9150272 -13272555 + AT_rich Low_complexity Low_complexity 1 25 0 1 654 21 0 0 0 chrX 9153287 9153308 -13269519 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 228 158 0 0 chrX 9154215 9154272 -13268555 + (CAG)n Simple_repeat Simple_repeat 3 59 0 1 654 219 161 0 0 chrX 9156821 9156877 -13265950 + (CAG)n Simple_repeat Simple_repeat 1 56 0 1 654 24 0 0 0 chrX 9160792 9160816 -13262011 + AT_rich Low_complexity Low_complexity 1 24 0 1 654 207 69 0 0 chrX 9161166 9161195 -13261632 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 654 257 261 0 0 chrX 9162557 9162622 -13260205 + (CTG)n Simple_repeat Simple_repeat 1 65 0 1 654 297 230 0 0 chrX 9162659 9162746 -13260081 - ROO_I LTR Pao -7518 738 652 1 654 221 304 0 0 chrX 9164865 9164944 -13257883 + (CTG)n Simple_repeat Simple_repeat 2 80 0 1 654 318 214 0 0 chrX 9164944 9165047 -13257780 - ROO_I LTR Pao -7513 743 641 1 654 21 0 0 0 chrX 9167072 9167093 -13255734 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 25 0 0 0 chrX 9169692 9169717 -13253110 + AT_rich Low_complexity Low_complexity 1 25 0 1 654 21 0 0 0 chrX 9169945 9169966 -13252861 + AT_rich Low_complexity Low_complexity 1 21 0 1 655 32 0 0 0 chrX 9177962 9177994 -13244833 + AT_rich Low_complexity Low_complexity 1 32 0 1 655 219 36 0 0 chrX 9178409 9178437 -13244390 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 655 27 29 0 0 chrX 9179558 9179592 -13243235 + AT_rich Low_complexity Low_complexity 1 34 0 1 655 202 309 0 0 chrX 9180130 9180185 -13242642 + (CTGGGG)n Simple_repeat Simple_repeat 3 57 0 1 655 279 131 19 48 chrX 9180270 9180374 -13242453 + (CCA)n Simple_repeat Simple_repeat 2 102 0 1 655 232 236 0 38 chrX 9180662 9180742 -13242085 + ROO_I LTR Pao 641 737 -7519 1 655 213 178 0 0 chrX 9181315 9181360 -13241467 + (ATG)n Simple_repeat Simple_repeat 1 45 0 1 655 183 80 0 0 chrX 9183774 9183799 -13239028 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 655 28 0 0 0 chrX 9183804 9183832 -13238995 + AT_rich Low_complexity Low_complexity 1 28 0 1 655 180 77 0 0 chrX 9184700 9184726 -13238101 + (A)n Simple_repeat Simple_repeat 1 26 0 1 655 21 36 0 0 chrX 9184983 9185011 -13237816 + AT_rich Low_complexity Low_complexity 1 28 0 1 655 183 129 0 0 chrX 9185309 9185340 -13237487 + (CATA)n Simple_repeat Simple_repeat 1 31 0 1 655 474 96 0 0 chrX 9185466 9185539 -13237288 + (TGGA)n Simple_repeat Simple_repeat 1 73 0 1 655 192 40 0 0 chrX 9185625 9185650 -13237177 + (ACTG)n Simple_repeat Simple_repeat 4 28 0 1 655 35 24 0 0 chrX 9189148 9189190 -13233637 + AT_rich Low_complexity Low_complexity 1 42 0 1 655 231 247 0 0 chrX 9189424 9189513 -13233314 + (CGG)n Simple_repeat Simple_repeat 2 90 0 1 655 382 261 9 0 chrX 9190369 9190480 -13232347 - XDMR_DM Unknown Unknown -229 131 20 1 655 3288 216 22 36 chrX 9190419 9191400 -13231427 + SAR_DM Satellite Satellite 246 1213 -259 1 655 222 62 0 0 chrX 9191734 9191766 -13231061 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 655 219 69 0 0 chrX 9192701 9192730 -13230097 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 655 23 0 0 0 chrX 9192994 9193017 -13229810 + AT_rich Low_complexity Low_complexity 1 23 0 1 655 189 107 0 0 chrX 9193679 9193707 -13229120 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 655 189 0 0 0 chrX 9195653 9195674 -13227153 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 655 24 53 0 0 chrX 9195939 9195977 -13226850 + AT_rich Low_complexity Low_complexity 1 38 0 1 655 235 238 0 0 chrX 9196718 9196802 -13226025 + ROO_I LTR Pao 638 721 -7535 1 655 23 0 0 0 chrX 9197989 9198012 -13224815 + AT_rich Low_complexity Low_complexity 1 23 0 1 655 21 36 0 0 chrX 9200195 9200223 -13222604 + AT_rich Low_complexity Low_complexity 1 28 0 1 655 201 213 0 0 chrX 9201106 9201153 -13221674 + A-rich Low_complexity Low_complexity 1 47 0 1 655 182 98 0 47 chrX 9201195 9201238 -13221589 + (CGGGG)n Simple_repeat Simple_repeat 4 44 0 1 655 189 0 0 0 chrX 9202286 9202307 -13220520 + (CTG)n Simple_repeat Simple_repeat 3 23 0 1 655 282 106 0 0 chrX 9202684 9202731 -13220096 + (TTG)n Simple_repeat Simple_repeat 2 48 0 1 655 498 96 0 0 chrX 9202878 9202951 -13219876 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 655 25 51 0 0 chrX 9203380 9203419 -13219408 + AT_rich Low_complexity Low_complexity 1 39 0 1 655 28 0 0 0 chrX 9203541 9203569 -13219258 + AT_rich Low_complexity Low_complexity 1 28 0 1 655 237 83 0 0 chrX 9204433 9204469 -13218358 + (TTTCG)n Simple_repeat Simple_repeat 1 36 0 1 655 216 0 0 0 chrX 9204580 9204604 -13218223 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 655 364 259 27 34 chrX 9207286 9207434 -13215393 - XDMR Unknown Unknown -213 148 2 1 655 2857 195 11 14 chrX 9207308 9208268 -13214559 + SAR_DM Satellite Satellite 1 957 -537 1 655 242 167 12 71 chrX 9208209 9208293 -13214534 - ARS406_DM Unknown Unknown -164 189 111 1 655 21 57 0 0 chrX 9208534 9208569 -13214258 + AT_rich Low_complexity Low_complexity 1 35 0 1 655 240 169 13 66 chrX 9209087 9209163 -13213664 - ROO_I LTR Pao -7518 738 667 1 655 22 0 0 0 chrX 9209312 9209334 -13213493 + AT_rich Low_complexity Low_complexity 1 22 0 1 655 189 0 0 0 chrX 9210771 9210792 -13212035 + (TTA)n Simple_repeat Simple_repeat 1 21 0 1 655 26 0 0 0 chrX 9219080 9219106 -13203721 + AT_rich Low_complexity Low_complexity 1 26 0 1 655 237 83 0 0 chrX 9220340 9220376 -13202451 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 1 655 231 157 0 0 chrX 9221031 9221082 -13201745 + (ATG)n Simple_repeat Simple_repeat 3 53 0 1 655 263 122 0 20 chrX 9221802 9221852 -13200975 + (CTG)n Simple_repeat Simple_repeat 1 49 0 1 655 195 42 0 0 chrX 9222011 9222035 -13200792 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1 655 231 36 0 0 chrX 9222287 9222315 -13200512 + (CTG)n Simple_repeat Simple_repeat 3 30 0 1 655 236 209 15 15 chrX 9222387 9222455 -13200372 + (CTG)n Simple_repeat Simple_repeat 1 68 0 1 655 206 136 0 22 chrX 9222513 9222558 -13200269 + (CTG)n Simple_repeat Simple_repeat 3 46 0 1 655 215 182 24 72 chrX 9224881 9224964 -13197863 + (CGAAA)n Simple_repeat Simple_repeat 3 81 0 1 655 198 0 0 0 chrX 9226363 9226385 -13196442 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 655 213 121 0 0 chrX 9226591 9226624 -13196203 + (CCG)n Simple_repeat Simple_repeat 2 34 0 1 655 23 33 0 0 chrX 9228049 9228079 -13194748 + AT_rich Low_complexity Low_complexity 1 30 0 1 655 213 39 0 0 chrX 9229142 9229168 -13193659 + (CAGC)n Simple_repeat Simple_repeat 4 29 0 1 655 427 153 10 10 chrX 9230192 9230291 -13192536 + (TA)n Simple_repeat Simple_repeat 2 100 0 1 655 192 135 0 0 chrX 9230511 9230548 -13192279 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 1 655 339 25 0 0 chrX 9230620 9230660 -13192167 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1 655 29 0 0 0 chrX 9230755 9230784 -13192043 + AT_rich Low_complexity Low_complexity 1 29 0 1 655 200 325 0 0 chrX 9231099 9231176 -13191651 + (CCG)n Simple_repeat Simple_repeat 2 78 0 1 655 411 21 0 0 chrX 9234175 9234223 -13188604 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1 655 29 0 0 0 chrX 9235057 9235086 -13187741 + AT_rich Low_complexity Low_complexity 1 29 0 1 655 267 31 0 0 chrX 9237327 9237359 -13185468 + (AACTG)n Simple_repeat Simple_repeat 4 35 0 1 655 25 51 0 0 chrX 9237802 9237841 -13184986 + AT_rich Low_complexity Low_complexity 1 39 0 1 655 217 250 0 0 chrX 9238319 9238375 -13184452 + A-rich Low_complexity Low_complexity 1 56 0 1 655 24 0 0 0 chrX 9238464 9238488 -13184339 + AT_rich Low_complexity Low_complexity 1 24 0 1 655 21 0 0 0 chrX 9240020 9240041 -13182786 + AT_rich Low_complexity Low_complexity 1 21 0 1 655 28 29 0 0 chrX 9240740 9240775 -13182052 + AT_rich Low_complexity Low_complexity 1 35 0 1 655 39 0 0 0 chrX 9241097 9241136 -13181691 + AT_rich Low_complexity Low_complexity 1 39 0 1 655 246 62 0 0 chrX 9242616 9242648 -13180179 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 655 405 0 0 0 chrX 9243797 9243842 -13178985 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 655 33 0 0 0 chrX 9244474 9244507 -13178320 + AT_rich Low_complexity Low_complexity 1 33 0 1 655 198 71 0 0 chrX 9244925 9244953 -13177874 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 655 186 43 0 0 chrX 9246009 9246032 -13176795 + (A)n Simple_repeat Simple_repeat 1 23 0 1 655 24 0 0 0 chrX 9246874 9246898 -13175929 + AT_rich Low_complexity Low_complexity 1 24 0 1 655 201 94 0 0 chrX 9247354 9247386 -13175441 + (A)n Simple_repeat Simple_repeat 1 32 0 1 655 24 32 0 0 chrX 9247412 9247443 -13175384 + AT_rich Low_complexity Low_complexity 1 31 0 1 655 257 237 20 30 chrX 9248602 9248702 -13174125 + (TTG)n Simple_repeat Simple_repeat 1 99 0 1 655 269 261 16 25 chrX 9248735 9248857 -13173970 - ROO_I LTR Pao -7523 733 613 1 655 209 253 40 0 chrX 9249869 9249944 -13172883 + CT-rich Low_complexity Low_complexity 2 79 0 1 655 183 204 0 0 chrX 9249989 9250033 -13172794 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 655 23 0 0 0 chrX 9250477 9250500 -13172327 + AT_rich Low_complexity Low_complexity 1 23 0 1 655 38 0 0 0 chrX 9252940 9252978 -13169849 + AT_rich Low_complexity Low_complexity 1 38 0 1 655 183 42 0 0 chrX 9253074 9253098 -13169729 + (A)n Simple_repeat Simple_repeat 1 24 0 1 655 38 0 0 0 chrX 9253272 9253310 -13169517 + AT_rich Low_complexity Low_complexity 1 38 0 1 655 219 69 0 0 chrX 9253415 9253444 -13169383 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 655 201 180 0 0 chrX 9253971 9254021 -13168806 + CT-rich Low_complexity Low_complexity 3 52 0 1 655 276 120 0 0 chrX 9254151 9254201 -13168626 + (CTG)n Simple_repeat Simple_repeat 2 51 0 1 655 3192 216 23 19 chrX 9268074 9268974 -13153853 - SAR_DM Satellite Satellite -601 903 1 1 655 249 211 0 0 chrX 9270301 9270358 -13152469 + (TCCG)n Simple_repeat Simple_repeat 2 58 0 1 655 38 0 0 0 chrX 9270940 9270978 -13151849 + AT_rich Low_complexity Low_complexity 1 38 0 1 655 24 0 0 0 chrX 9272355 9272379 -13150448 + AT_rich Low_complexity Low_complexity 1 24 0 1 655 291 28 0 0 chrX 9272486 9272522 -13150305 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 655 204 246 32 16 chrX 9272819 9272881 -13149946 + G-rich Low_complexity Low_complexity 1 63 0 1 655 228 111 0 0 chrX 9274021 9274057 -13148770 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 655 237 163 0 0 chrX 9276241 9276290 -13146537 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 655 297 75 0 0 chrX 9276920 9276960 -13145867 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 655 206 224 0 0 chrX 9277979 9278028 -13144799 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 655 203 175 0 24 chrX 9280203 9280244 -13142583 + (TGGA)n Simple_repeat Simple_repeat 4 43 0 1 655 32 0 0 0 chrX 9282578 9282610 -13140217 + AT_rich Low_complexity Low_complexity 1 32 0 1 655 186 71 0 0 chrX 9282732 9282760 -13140067 + (TAAAAA)n Simple_repeat Simple_repeat 1 28 0 1 655 198 91 0 0 chrX 9282780 9282813 -13140014 + (A)n Simple_repeat Simple_repeat 1 33 0 1 655 22 0 0 0 chrX 9283969 9283991 -13138836 + AT_rich Low_complexity Low_complexity 1 22 0 1 655 22 0 0 0 chrX 9284463 9284485 -13138342 + AT_rich Low_complexity Low_complexity 1 22 0 1 655 28 0 0 0 chrX 9284994 9285022 -13137805 + AT_rich Low_complexity Low_complexity 1 28 0 1 655 21 0 0 0 chrX 9286314 9286335 -13136492 + AT_rich Low_complexity Low_complexity 1 21 0 1 655 189 121 0 0 chrX 9288416 9288449 -13134378 + (A)n Simple_repeat Simple_repeat 1 33 0 1 655 198 0 0 0 chrX 9288508 9288530 -13134297 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 655 2496 224 29 16 chrX 9290795 9291476 -13131351 - SAR_DM Satellite Satellite -592 880 191 1 655 21 0 0 0 chrX 9292056 9292077 -13130750 + AT_rich Low_complexity Low_complexity 1 21 0 1 655 207 114 0 0 chrX 9292560 9292595 -13130232 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 655 282 29 0 0 chrX 9293434 9293469 -13129358 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 655 186 103 0 0 chrX 9293633 9293662 -13129165 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 655 216 0 0 0 chrX 9294547 9294571 -13128256 + (ATG)n Simple_repeat Simple_repeat 1 24 0 1 655 232 179 26 0 chrX 9294725 9294803 -13128024 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 655 195 42 0 0 chrX 9294940 9294964 -13127863 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 655 223 170 43 0 chrX 9295958 9296005 -13126822 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 1 655 24 53 0 0 chrX 9296587 9296625 -13126202 + AT_rich Low_complexity Low_complexity 1 38 0 1 655 220 261 0 0 chrX 9297209 9297255 -13125572 + G-rich Low_complexity Low_complexity 3 48 0 1 655 207 0 0 0 chrX 9297744 9297767 -13125060 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 655 207 204 0 0 chrX 9299189 9299233 -13123594 + T-rich Low_complexity Low_complexity 1 44 0 1 655 198 0 0 0 chrX 9299314 9299336 -13123491 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1 655 271 330 0 0 chrX 9299732 9299826 -13123001 + CT-rich Low_complexity Low_complexity 1 94 0 1 655 203 143 48 0 chrX 9299795 9299837 -13122990 + (TCTG)n Simple_repeat Simple_repeat 4 47 0 1 655 189 0 0 0 chrX 9300451 9300472 -13122355 + (TC)n Simple_repeat Simple_repeat 1 21 0 1 655 228 35 0 0 chrX 9301560 9301589 -13121238 + (A)n Simple_repeat Simple_repeat 1 29 0 1 655 28 0 0 0 chrX 9303060 9303088 -13119739 + AT_rich Low_complexity Low_complexity 1 28 0 1 655 240 35 0 0 chrX 9303485 9303514 -13119313 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 655 22 35 0 0 chrX 9304502 9304531 -13118296 + AT_rich Low_complexity Low_complexity 1 29 0 1 655 192 77 0 0 chrX 9304984 9305010 -13117817 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 655 261 119 0 0 chrX 9305263 9305305 -13117522 + (CTG)n Simple_repeat Simple_repeat 1 42 0 1 655 251 196 10 49 chrX 9305786 9305888 -13116939 + ROO_I LTR Pao 641 738 -7518 1 655 362 245 19 68 chrX 9305891 9306053 -13116774 + (CAG)n Simple_repeat Simple_repeat 2 155 0 1 656 204 67 0 0 chrX 9306801 9306831 -13115996 + (A)n Simple_repeat Simple_repeat 1 30 0 1 656 231 290 0 0 chrX 9307793 9307855 -13114972 + T-rich Low_complexity Low_complexity 2 63 0 1 656 27 29 0 0 chrX 9308171 9308205 -13114622 + AT_rich Low_complexity Low_complexity 1 34 0 1 656 396 40 0 0 chrX 9311354 9311404 -13111423 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 656 234 0 0 0 chrX 9313507 9313533 -13109294 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 656 180 0 0 0 chrX 9315761 9315781 -13107046 + (T)n Simple_repeat Simple_repeat 1 20 0 1 656 262 283 17 17 chrX 9316644 9316759 -13106068 - ARS406_DM Unknown Unknown -238 115 1 1 656 4623 177 16 30 chrX 9316662 9317702 -13105125 + SAR_DM Satellite Satellite 191 1216 -256 1 656 22 0 0 0 chrX 9319412 9319434 -13103393 + AT_rich Low_complexity Low_complexity 1 22 0 1 656 24 0 0 0 chrX 9321178 9321202 -13101625 + AT_rich Low_complexity Low_complexity 1 24 0 1 656 230 167 0 16 chrX 9322562 9322623 -13100204 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 656 235 130 93 0 chrX 9322714 9322768 -13100059 + ROO_I LTR Pao 668 726 -7530 1 656 180 77 0 0 chrX 9323265 9323291 -13099536 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 1 656 239 292 0 0 chrX 9323672 9323744 -13099083 + (ATG)n Simple_repeat Simple_repeat 1 72 0 1 656 213 200 0 0 chrX 9324280 9324325 -13098502 + G-rich Low_complexity Low_complexity 3 47 0 1 656 222 136 0 0 chrX 9324910 9324954 -13097873 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 656 186 167 0 0 chrX 9325267 9325303 -13097524 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 656 190 136 0 43 chrX 9325431 9325477 -13097350 + (CAG)n Simple_repeat Simple_repeat 1 44 0 1 656 31 26 0 0 chrX 9325647 9325685 -13097142 + AT_rich Low_complexity Low_complexity 1 38 0 1 656 186 43 0 0 chrX 9328935 9328958 -13093869 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 656 303 93 0 0 chrX 9330940 9330983 -13091844 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 656 23 33 0 0 chrX 9331099 9331129 -13091698 + AT_rich Low_complexity Low_complexity 1 30 0 1 656 21 0 0 0 chrX 9331275 9331296 -13091531 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 243 61 0 0 chrX 9331947 9331980 -13090847 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 656 23 0 0 0 chrX 9332082 9332105 -13090722 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 30 0 0 0 chrX 9332212 9332242 -13090585 + AT_rich Low_complexity Low_complexity 1 30 0 1 656 219 167 0 0 chrX 9334946 9334988 -13087839 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 656 210 289 0 0 chrX 9335244 9335296 -13087531 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 656 210 71 0 0 chrX 9336728 9336756 -13086071 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 656 23 33 0 0 chrX 9337622 9337652 -13085175 + AT_rich Low_complexity Low_complexity 1 30 0 1 656 21 36 0 0 chrX 9337717 9337745 -13085082 + AT_rich Low_complexity Low_complexity 1 28 0 1 656 245 275 0 0 chrX 9338237 9338306 -13084521 + A-rich Low_complexity Low_complexity 1 69 0 1 656 225 65 0 0 chrX 9338908 9338939 -13083888 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 656 226 170 0 86 chrX 9339761 9339819 -13083008 + A-rich Low_complexity Low_complexity 4 56 0 1 656 204 40 0 0 chrX 9339834 9339859 -13082968 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1 656 245 228 0 25 chrX 9340386 9340467 -13082360 + A-rich Low_complexity Low_complexity 2 80 0 1 656 32 67 0 0 chrX 9341041 9341101 -13081726 + AT_rich Low_complexity Low_complexity 1 60 0 1 656 204 229 0 0 chrX 9342966 9343014 -13079813 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 656 204 240 0 0 chrX 9343165 9343215 -13079612 + A-rich Low_complexity Low_complexity 1 50 0 1 656 219 191 0 0 chrX 9343656 9343719 -13079108 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 656 23 33 0 0 chrX 9345109 9345139 -13077688 + AT_rich Low_complexity Low_complexity 1 30 0 1 656 22 56 0 0 chrX 9345629 9345665 -13077162 + AT_rich Low_complexity Low_complexity 1 36 0 1 656 201 204 20 0 chrX 9346065 9346114 -13076713 + T-rich Low_complexity Low_complexity 2 51 0 1 656 207 0 0 0 chrX 9346724 9346747 -13076080 + (TTTCG)n Simple_repeat Simple_repeat 3 25 0 1 656 21 0 0 0 chrX 9347334 9347355 -13075472 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 216 250 0 0 chrX 9349028 9349084 -13073743 + (TCTCTG)n Simple_repeat Simple_repeat 4 59 0 1 656 204 282 0 40 chrX 9350187 9350261 -13072566 + (CAA)n Simple_repeat Simple_repeat 2 72 0 1 656 27 0 0 0 chrX 9350618 9350645 -13072182 + AT_rich Low_complexity Low_complexity 1 27 0 1 656 203 337 0 0 chrX 9352092 9352193 -13070634 + T-rich Low_complexity Low_complexity 1 101 0 1 656 217 235 29 14 chrX 9352306 9352375 -13070452 + A-rich Low_complexity Low_complexity 3 72 0 1 656 21 0 0 0 chrX 9352435 9352456 -13070371 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 27 49 0 0 chrX 9353342 9353383 -13069444 + AT_rich Low_complexity Low_complexity 1 41 0 1 656 22 70 0 0 chrX 9354851 9354894 -13067933 + AT_rich Low_complexity Low_complexity 1 43 0 1 656 211 220 0 0 chrX 9355009 9355059 -13067768 + T-rich Low_complexity Low_complexity 1 50 0 1 656 3216 178 33 10 chrX 9355511 9356254 -13066573 + SAR_DM Satellite Satellite 1 760 -554 1 656 217 85 85 0 chrX 9356655 9356702 -13066125 + A-rich Low_complexity Low_complexity 5 55 0 1 656 30 27 0 0 chrX 9359338 9359375 -13063452 + AT_rich Low_complexity Low_complexity 1 37 0 1 656 192 125 0 0 chrX 9359881 9359913 -13062914 + (TATG)n Simple_repeat Simple_repeat 3 34 0 1 656 24 53 0 0 chrX 9360279 9360317 -13062510 + AT_rich Low_complexity Low_complexity 1 38 0 1 656 23 0 0 0 chrX 9360422 9360445 -13062382 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 207 204 0 0 chrX 9360617 9360666 -13062161 + (TTG)n Simple_repeat Simple_repeat 1 49 0 1 656 25 31 0 0 chrX 9361158 9361190 -13061637 + AT_rich Low_complexity Low_complexity 1 32 0 1 656 25 0 0 0 chrX 9361436 9361461 -13061366 + AT_rich Low_complexity Low_complexity 1 25 0 1 656 210 157 37 56 chrX 9361798 9361852 -13060975 + (TAATG)n Simple_repeat Simple_repeat 5 57 0 1 656 27 29 0 0 chrX 9361899 9361933 -13060894 + AT_rich Low_complexity Low_complexity 1 34 0 1 656 230 191 52 73 chrX 9362074 9362170 -13060657 + ROO_I LTR Pao 636 729 -7527 1 656 238 221 0 0 chrX 9362275 9362343 -13060484 - ROO_I LTR Pao -7537 719 652 1 656 180 77 0 0 chrX 9362613 9362639 -13060188 + (CATTG)n Simple_repeat Simple_repeat 1 26 0 1 656 233 207 0 12 chrX 9362672 9362755 -13060072 + (ATG)n Simple_repeat Simple_repeat 1 82 0 1 656 264 130 0 0 chrX 9362800 9362846 -13059981 + (CAG)n Simple_repeat Simple_repeat 1 46 0 1 656 395 202 0 10 chrX 9363168 9363268 -13059559 + ROO_I LTR Pao 645 743 -7513 1 656 189 147 0 0 chrX 9364244 9364278 -13058549 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 656 21 0 0 0 chrX 9364772 9364793 -13058034 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 23 0 0 0 chrX 9365189 9365212 -13057615 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 201 256 13 13 chrX 9366145 9366224 -13056603 + (CTG)n Simple_repeat Simple_repeat 1 79 0 1 656 189 0 0 0 chrX 9366910 9366931 -13055896 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 656 207 100 0 0 chrX 9367097 9367127 -13055700 + (T)n Simple_repeat Simple_repeat 1 30 0 1 656 237 139 0 0 chrX 9368338 9368381 -13054446 + (A)n Simple_repeat Simple_repeat 1 43 0 1 656 24 0 0 0 chrX 9369746 9369770 -13053057 + AT_rich Low_complexity Low_complexity 1 24 0 1 656 216 0 0 0 chrX 9369989 9370013 -13052814 + (A)n Simple_repeat Simple_repeat 1 24 0 1 656 22 56 0 0 chrX 9370109 9370145 -13052682 + AT_rich Low_complexity Low_complexity 1 36 0 1 656 29 28 0 0 chrX 9370981 9371017 -13051810 + AT_rich Low_complexity Low_complexity 1 36 0 1 656 189 107 0 0 chrX 9372741 9372769 -13050058 + (T)n Simple_repeat Simple_repeat 1 28 0 1 656 543 112 0 0 chrX 9372930 9373028 -13049799 + (ACTG)n Simple_repeat Simple_repeat 3 100 0 1 656 183 80 0 0 chrX 9373827 9373852 -13048975 + (T)n Simple_repeat Simple_repeat 1 25 0 1 656 210 167 0 0 chrX 9375920 9375956 -13046871 + A-rich Low_complexity Low_complexity 5 40 0 1 656 29 70 0 0 chrX 9376242 9376299 -13046528 + AT_rich Low_complexity Low_complexity 1 57 0 1 656 186 71 0 0 chrX 9376479 9376507 -13046320 + (T)n Simple_repeat Simple_repeat 1 28 0 1 656 261 0 0 0 chrX 9378582 9378611 -13044216 + (T)n Simple_repeat Simple_repeat 1 29 0 1 656 23 0 0 0 chrX 9379096 9379119 -13043708 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 288 170 28 74 chrX 9379272 9379380 -13043447 + ROO_I LTR Pao 641 743 -7513 1 656 379 184 0 37 chrX 9379388 9379495 -13043332 + ROO_I LTR Pao 641 743 -7513 1 656 26 50 0 0 chrX 9380210 9380250 -13042577 + AT_rich Low_complexity Low_complexity 1 40 0 1 656 201 154 0 0 chrX 9380358 9380397 -13042430 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1 656 212 208 10 0 chrX 9380478 9380574 -13042253 + (CA)n Simple_repeat Simple_repeat 2 98 0 1 656 233 224 0 15 chrX 9380650 9380718 -13042109 + GA-rich Low_complexity Low_complexity 1 67 0 1 656 198 0 0 0 chrX 9381401 9381423 -13041404 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 656 34 24 0 0 chrX 9382107 9382148 -13040679 + AT_rich Low_complexity Low_complexity 1 41 0 1 656 299 25 25 0 chrX 9382499 9382539 -13040288 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 656 24 0 0 0 chrX 9383607 9383631 -13039196 + AT_rich Low_complexity Low_complexity 1 24 0 1 656 180 77 0 0 chrX 9385106 9385132 -13037695 + (T)n Simple_repeat Simple_repeat 1 26 0 1 656 218 122 24 0 chrX 9386217 9386258 -13036569 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1 656 288 193 22 43 chrX 9389915 9390007 -13032820 + A-rich Low_complexity Low_complexity 5 94 0 1 656 198 150 0 0 chrX 9390241 9390281 -13032546 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 656 222 37 0 0 chrX 9390367 9390394 -13032433 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 656 23 0 0 0 chrX 9390885 9390908 -13031919 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 203 156 0 0 chrX 9391217 9391249 -13031578 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 656 183 204 0 0 chrX 9391465 9391514 -13031313 + CT-rich Low_complexity Low_complexity 2 50 0 1 656 25 0 0 0 chrX 9391620 9391645 -13031182 + AT_rich Low_complexity Low_complexity 1 25 0 1 656 22 0 0 0 chrX 9391835 9391857 -13030970 + AT_rich Low_complexity Low_complexity 1 22 0 1 656 192 40 0 0 chrX 9393968 9393993 -13028834 + (TTTC)n Simple_repeat Simple_repeat 1 25 0 1 656 240 35 0 0 chrX 9394975 9395004 -13027823 + (CATA)n Simple_repeat Simple_repeat 4 32 0 1 656 24 67 0 0 chrX 9396084 9396129 -13026698 + AT_rich Low_complexity Low_complexity 1 45 0 1 656 203 191 21 0 chrX 9396816 9396863 -13025964 + T-rich Low_complexity Low_complexity 3 50 0 1 656 21 57 0 0 chrX 9399107 9399142 -13023685 + AT_rich Low_complexity Low_complexity 1 35 0 1 656 189 0 0 0 chrX 9400222 9400243 -13022584 + (T)n Simple_repeat Simple_repeat 1 21 0 1 656 255 79 0 0 chrX 9401009 9401047 -13021780 + (TCCA)n Simple_repeat Simple_repeat 2 39 0 1 656 52 64 0 0 chrX 9401299 9401393 -13021434 + AT_rich Low_complexity Low_complexity 1 94 0 1 656 12987 3 0 7 chrX 9402225 9403664 -13019163 + LINEJ1_DM LINE Jockey 3592 5020 0 1 656 198 0 0 0 chrX 9405436 9405458 -13017369 + (T)n Simple_repeat Simple_repeat 1 22 0 1 656 23 0 0 0 chrX 9407350 9407373 -13015454 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 186 43 0 0 chrX 9407699 9407722 -13015105 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 656 210 150 0 0 chrX 9407902 9407942 -13014885 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 656 4505 186 29 11 chrX 9409172 9410213 -13012614 - SAR_DM Satellite Satellite -233 1239 180 1 656 391 242 8 0 chrX 9410107 9410227 -13012600 + ARS406_DM Unknown Unknown 1 121 -232 1 656 27 29 0 0 chrX 9413314 9413348 -13009479 + AT_rich Low_complexity Low_complexity 1 34 0 1 656 23 0 0 0 chrX 9413553 9413576 -13009251 + AT_rich Low_complexity Low_complexity 1 23 0 1 656 261 0 0 0 chrX 9414095 9414124 -13008703 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 656 21 0 0 0 chrX 9414392 9414413 -13008414 + AT_rich Low_complexity Low_complexity 1 21 0 1 656 294 50 0 0 chrX 9415765 9415805 -13007022 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 656 26 0 0 0 chrX 9416200 9416226 -13006601 + AT_rich Low_complexity Low_complexity 1 26 0 1 656 195 162 0 0 chrX 9416886 9416923 -13005904 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 656 226 0 29 29 chrX 9417262 9417297 -13005530 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 656 276 30 0 0 chrX 9417509 9417542 -13005285 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 656 222 37 0 0 chrX 9418961 9418988 -13003839 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 656 318 87 0 0 chrX 9419202 9419248 -13003579 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 656 198 0 0 0 chrX 9420209 9420231 -13002596 + (GAA)n Simple_repeat Simple_repeat 3 24 0 1 656 220 293 0 0 chrX 9421229 9421287 -13001540 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 1 656 33 25 0 0 chrX 9422708 9422748 -13000079 + AT_rich Low_complexity Low_complexity 1 40 0 1 656 38 22 0 0 chrX 9424188 9424233 -12998594 + AT_rich Low_complexity Low_complexity 1 45 0 1 656 198 0 0 0 chrX 9424395 9424417 -12998410 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 656 22 0 0 0 chrX 9424939 9424961 -12997866 + AT_rich Low_complexity Low_complexity 1 22 0 1 656 206 25 100 0 chrX 9425727 9425767 -12997060 + (CGAAT)n Simple_repeat Simple_repeat 1 44 0 1 656 318 221 0 0 chrX 9426454 9426549 -12996278 + (CA)n Simple_repeat Simple_repeat 2 96 0 1 656 270 0 0 0 chrX 9427020 9427050 -12995777 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 656 3583 195 29 10 chrX 9428611 9429478 -12993349 + SAR_DM Satellite Satellite 237 1119 -353 1 656 213 132 0 0 chrX 9430211 9430249 -12992578 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 656 31 58 0 0 chrX 9430365 9430417 -12992410 + AT_rich Low_complexity Low_complexity 1 52 0 1 656 273 135 0 0 chrX 9433141 9433193 -12989634 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 656 183 42 0 0 chrX 9433733 9433757 -12989070 + (A)n Simple_repeat Simple_repeat 1 24 0 1 656 24 32 0 0 chrX 9434052 9434083 -12988744 + AT_rich Low_complexity Low_complexity 1 31 0 1 656 387 73 0 0 chrX 9434643 9434698 -12988129 + (CAT)n Simple_repeat Simple_repeat 1 55 0 1 656 29 94 0 0 chrX 9436148 9436233 -12986594 + AT_rich Low_complexity Low_complexity 1 85 0 1 656 423 92 0 0 chrX 9436417 9436482 -12986345 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 657 333 140 0 0 chrX 9438620 9438677 -12984150 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 657 294 106 0 0 chrX 9439982 9440029 -12982798 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 657 180 0 0 0 chrX 9441691 9441711 -12981116 + (T)n Simple_repeat Simple_repeat 1 20 0 1 657 23 0 0 0 chrX 9442085 9442108 -12980719 + AT_rich Low_complexity Low_complexity 1 23 0 1 657 21 57 0 0 chrX 9442900 9442935 -12979892 + AT_rich Low_complexity Low_complexity 1 35 0 1 657 216 0 0 0 chrX 9443574 9443598 -12979229 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 1 657 381 213 41 30 chrX 9444085 9444254 -12978573 + (TTCA)n Simple_repeat Simple_repeat 2 172 0 1 657 189 196 0 0 chrX 9445147 9445203 -12977624 + T-rich Low_complexity Low_complexity 1 56 0 1 657 183 42 0 0 chrX 9445630 9445654 -12977173 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 657 27 29 0 0 chrX 9448096 9448130 -12974697 + AT_rich Low_complexity Low_complexity 1 34 0 1 657 3045 178 75 24 chrX 9450747 9451402 -12971425 + SAR_DM Satellite Satellite 1 688 -386 1 657 409 20 39 0 chrX 9451404 9451455 -12971372 + BARI1 DNA Tc1 41 93 -1657 1 657 24 0 0 0 chrX 9465583 9465607 -12957220 + AT_rich Low_complexity Low_complexity 1 24 0 1 657 220 179 18 18 chrX 9466806 9466863 -12955964 + (TAA)n Simple_repeat Simple_repeat 3 59 0 1 657 24 0 0 0 chrX 9466905 9466929 -12955898 + AT_rich Low_complexity Low_complexity 1 24 0 1 657 25 0 0 0 chrX 9467410 9467435 -12955392 + AT_rich Low_complexity Low_complexity 1 25 0 1 657 2448 4 0 0 chrX 9469878 9470145 -12952682 + MDG3_LTR LTR Gypsy 1 267 0 1 657 254 29 29 0 chrX 9470434 9470469 -12952358 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 657 27 29 0 0 chrX 9473793 9473827 -12949000 + AT_rich Low_complexity Low_complexity 1 34 0 1 657 22 70 0 0 chrX 9475378 9475421 -12947406 + AT_rich Low_complexity Low_complexity 1 43 0 1 657 270 56 0 0 chrX 9476060 9476096 -12946731 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 657 258 105 0 0 chrX 9476721 9476759 -12946068 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 657 215 224 0 0 chrX 9478148 9478197 -12944630 + (CATA)n Simple_repeat Simple_repeat 4 52 0 1 657 25 0 0 0 chrX 9479166 9479191 -12943636 + AT_rich Low_complexity Low_complexity 1 25 0 1 657 243 236 14 27 chrX 9480152 9480226 -12942601 + GA-rich Low_complexity Low_complexity 3 75 0 1 657 256 311 0 0 chrX 9480381 9480471 -12942356 + (CAA)n Simple_repeat Simple_repeat 1 90 0 1 657 22 0 0 0 chrX 9482379 9482401 -12940426 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 275 169 14 0 chrX 9482715 9482786 -12940041 + GA-rich Low_complexity Low_complexity 2 73 0 1 657 23 33 0 0 chrX 9482876 9482906 -12939921 + AT_rich Low_complexity Low_complexity 1 30 0 1 657 21 0 0 0 chrX 9485824 9485845 -12936982 + AT_rich Low_complexity Low_complexity 1 21 0 1 657 24 32 0 0 chrX 9486578 9486609 -12936218 + AT_rich Low_complexity Low_complexity 1 31 0 1 657 370 164 0 15 chrX 9491344 9491412 -12931415 - DNAREP1_DM LINE Penelope -2 592 526 1 657 3334 170 8 12 chrX 9491423 9492090 -12930737 + SAR_DM Satellite Satellite 208 871 -601 1 657 808 216 4 43 chrX 9491903 9492135 -12930692 - XDMR_DM Unknown Unknown 0 360 138 1 657 210 255 0 0 chrX 9493486 9493537 -12929290 + (CAGAGA)n Simple_repeat Simple_repeat 4 54 0 1 657 216 67 0 0 chrX 9498883 9498913 -12923914 + (CTA)n Simple_repeat Simple_repeat 1 30 0 1 657 238 82 0 58 chrX 9503433 9503485 -12919342 + (GGA)n Simple_repeat Simple_repeat 3 51 0 1 657 183 114 0 0 chrX 9504141 9504176 -12918651 + (GGA)n Simple_repeat Simple_repeat 1 35 0 1 657 198 143 0 0 chrX 9505189 9505224 -12917603 + (CAG)n Simple_repeat Simple_repeat 3 37 0 1 657 215 203 17 0 chrX 9508156 9508215 -12914612 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 657 206 343 0 0 chrX 9509309 9509379 -12913448 + G-rich Low_complexity Low_complexity 5 74 0 1 657 23 0 0 0 chrX 9512951 9512974 -12909853 + AT_rich Low_complexity Low_complexity 1 23 0 1 657 327 154 0 0 chrX 9513242 9513307 -12909520 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 657 295 196 0 0 chrX 9515713 9515769 -12907058 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 657 294 50 0 0 chrX 9516589 9516629 -12906198 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 657 241 217 33 0 chrX 9517089 9517149 -12905678 + (CAGAGA)n Simple_repeat Simple_repeat 5 66 0 1 657 5105 178 23 26 chrX 9517328 9520255 -12902572 - SAR_DM Satellite Satellite -243 2917 1 1 657 222 37 0 0 chrX 9521330 9521357 -12901470 + (ACTG)n Simple_repeat Simple_repeat 1 27 0 1 657 278 204 21 41 chrX 9522697 9522794 -12900033 + T-rich Low_complexity Low_complexity 2 96 0 1 657 22 35 0 0 chrX 9522794 9522823 -12900004 + AT_rich Low_complexity Low_complexity 1 29 0 1 657 26 0 0 0 chrX 9522856 9522882 -12899945 + AT_rich Low_complexity Low_complexity 1 26 0 1 657 185 94 31 0 chrX 9522978 9523010 -12899817 + (CATAT)n Simple_repeat Simple_repeat 5 37 0 1 657 22 0 0 0 chrX 9530290 9530312 -12892515 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 543 31 0 0 chrX 9532088 9532153 -12890674 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 657 216 179 0 0 chrX 9532755 9532794 -12890033 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 657 21 0 0 0 chrX 9535502 9535523 -12887304 + AT_rich Low_complexity Low_complexity 1 21 0 1 657 192 125 0 0 chrX 9535930 9535962 -12886865 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 657 225 151 0 0 chrX 9538183 9538236 -12884591 + CT-rich Low_complexity Low_complexity 3 55 0 1 657 219 114 0 0 chrX 9538977 9539012 -12883815 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 1 657 21 57 0 0 chrX 9541574 9541609 -12881218 + AT_rich Low_complexity Low_complexity 1 35 0 1 657 219 36 0 0 chrX 9541865 9541893 -12880934 + (CCAA)n Simple_repeat Simple_repeat 1 28 0 1 657 30 0 0 0 chrX 9544698 9544728 -12878099 + AT_rich Low_complexity Low_complexity 1 30 0 1 657 198 118 0 0 chrX 9545170 9545204 -12877623 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 657 185 250 0 16 chrX 9545705 9545766 -12877061 + (TATATG)n Simple_repeat Simple_repeat 1 60 0 1 657 21 0 0 0 chrX 9546255 9546276 -12876551 + AT_rich Low_complexity Low_complexity 1 21 0 1 657 23 33 0 0 chrX 9548153 9548183 -12874644 + AT_rich Low_complexity Low_complexity 1 30 0 1 657 204 171 0 24 chrX 9549211 9549253 -12873574 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 657 21 36 0 0 chrX 9549590 9549618 -12873209 + AT_rich Low_complexity Low_complexity 1 28 0 1 657 35 24 0 0 chrX 9551851 9551893 -12870934 + AT_rich Low_complexity Low_complexity 1 42 0 1 657 191 146 24 0 chrX 9552356 9552397 -12870430 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 657 24 0 0 0 chrX 9555019 9555043 -12867784 + AT_rich Low_complexity Low_complexity 1 24 0 1 657 25 31 0 0 chrX 9555902 9555934 -12866893 + AT_rich Low_complexity Low_complexity 1 32 0 1 657 22 0 0 0 chrX 9559348 9559370 -12863457 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 33 25 0 0 chrX 9559406 9559446 -12863381 + AT_rich Low_complexity Low_complexity 1 40 0 1 657 227 200 0 0 chrX 9559588 9559638 -12863189 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 657 251 259 0 24 chrX 9559807 9559890 -12862937 + (TTA)n Simple_repeat Simple_repeat 1 81 0 1 657 218 200 0 79 chrX 9559891 9559967 -12862860 + T-rich Low_complexity Low_complexity 4 73 0 1 657 211 270 39 20 chrX 9560028 9560130 -12862697 + T-rich Low_complexity Low_complexity 5 108 0 1 657 327 49 0 0 chrX 9560296 9560337 -12862490 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 657 22 0 0 0 chrX 9561067 9561089 -12861738 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 198 71 0 0 chrX 9561333 9561361 -12861466 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 657 208 95 23 23 chrX 9561519 9561562 -12861265 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 657 207 204 0 0 chrX 9562171 9562225 -12860602 + (CACG)n Simple_repeat Simple_repeat 2 55 0 1 657 183 100 0 0 chrX 9563708 9563738 -12859089 + (CTG)n Simple_repeat Simple_repeat 3 32 0 1 657 258 116 0 0 chrX 9564210 9564253 -12858574 + (CTG)n Simple_repeat Simple_repeat 3 45 0 1 657 247 189 13 26 chrX 9564693 9564769 -12858058 + (TAA)n Simple_repeat Simple_repeat 2 76 0 1 657 249 177 25 12 chrX 9565079 9565159 -12857668 - ROO_I LTR Pao -7542 714 634 1 658 270 0 0 0 chrX 9569226 9569256 -12853571 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 658 254 132 0 19 chrX 9569365 9569419 -12853408 + A-rich Low_complexity Low_complexity 5 57 0 1 658 180 0 0 0 chrX 9571842 9571862 -12850965 + (CCA)n Simple_repeat Simple_repeat 2 21 0 1 658 223 261 14 14 chrX 9571957 9572027 -12850800 + (CTG)n Simple_repeat Simple_repeat 3 72 0 1 658 912 238 8 68 chrX 9572153 9572419 -12850408 - TART_B1 LINE telomeric -2578 8076 7827 1 658 300 111 0 0 chrX 9572420 9572465 -12850362 + (CTG)n Simple_repeat Simple_repeat 1 45 0 1 658 358 272 95 8 chrX 9572477 9572510 -12850317 - TART_B1 LINE telomeric -8337 6140 6107 1 658 261 83 0 0 chrX 9572510 9572546 -12850281 + (CTG)n Simple_repeat Simple_repeat 1 36 0 1 658 389 214 21 72 chrX 9572546 9572675 -12850152 - TART_B1 LINE telomeric -10534 120 30 1 658 967 246 20 57 chrX 9572763 9573064 -12849763 - TART LINE telomeric -10627 3850 3561 1 658 321 225 9 22 chrX 9573085 9573190 -12849637 - TART LINE telomeric -2342 12135 12040 1 658 189 147 0 0 chrX 9573768 9573802 -12849025 + (CTG)n Simple_repeat Simple_repeat 2 35 0 1 658 203 233 0 0 chrX 9573842 9573885 -12848942 + (CTG)n Simple_repeat Simple_repeat 3 45 0 1 658 201 74 0 0 chrX 9574097 9574124 -12848703 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 658 285 109 0 0 chrX 9574279 9574325 -12848502 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 658 262 93 0 53 chrX 9574841 9574898 -12847929 + (CTG)n Simple_repeat Simple_repeat 1 54 0 1 658 198 103 0 0 chrX 9575130 9575159 -12847668 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 658 210 290 11 21 chrX 9575965 9576060 -12846767 + (CTG)n Simple_repeat Simple_repeat 3 96 0 1 658 201 94 0 0 chrX 9577141 9577173 -12845654 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 658 221 274 0 0 chrX 9577299 9577361 -12845466 + CT-rich Low_complexity Low_complexity 4 65 0 1 658 341 209 9 43 chrX 9577566 9577681 -12845146 - ROO_I LTR Pao -7510 746 636 1 658 204 40 0 0 chrX 9577764 9577789 -12845038 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1 658 183 42 0 0 chrX 9577933 9577957 -12844870 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 658 204 200 0 0 chrX 9578103 9578153 -12844674 + (CTG)n Simple_repeat Simple_repeat 3 52 0 1 658 21 0 0 0 chrX 9581823 9581844 -12840983 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 26 0 0 0 chrX 9582566 9582592 -12840235 + AT_rich Low_complexity Low_complexity 1 26 0 1 658 26 30 0 0 chrX 9582639 9582672 -12840155 + AT_rich Low_complexity Low_complexity 1 33 0 1 658 24 0 0 0 chrX 9583371 9583395 -12839432 + AT_rich Low_complexity Low_complexity 1 24 0 1 658 264 59 0 0 chrX 9583550 9583584 -12839243 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 658 213 39 0 0 chrX 9583747 9583773 -12839054 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 658 23 33 0 0 chrX 9583781 9583811 -12839016 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 228 143 0 0 chrX 9584626 9584668 -12838159 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 658 21 0 0 0 chrX 9585039 9585060 -12837767 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 21 57 0 0 chrX 9587395 9587430 -12835397 + AT_rich Low_complexity Low_complexity 1 35 0 1 658 192 77 0 0 chrX 9587743 9587769 -12835058 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 658 282 152 0 0 chrX 9588357 9588416 -12834411 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 658 297 297 0 0 chrX 9588744 9588862 -12833965 + (CAG)n Simple_repeat Simple_repeat 3 120 0 1 658 373 152 0 83 chrX 9588868 9588976 -12833851 + ROO_I LTR Pao 641 739 -7517 1 658 237 163 0 0 chrX 9589316 9589365 -12833462 + (CAG)n Simple_repeat Simple_repeat 1 49 0 1 658 265 82 41 0 chrX 9591283 9591332 -12831495 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 658 330 67 0 0 chrX 9592789 9592834 -12829993 + (GGA)n Simple_repeat Simple_repeat 3 47 0 1 658 26 30 0 0 chrX 9593893 9593926 -12828901 + AT_rich Low_complexity Low_complexity 1 33 0 1 658 294 115 0 0 chrX 9595152 9595204 -12827623 + (ATTCG)n Simple_repeat Simple_repeat 5 56 0 1 658 180 0 0 0 chrX 9595339 9595359 -12827468 + (CAA)n Simple_repeat Simple_repeat 3 22 0 1 658 23 0 0 0 chrX 9595441 9595464 -12827363 + AT_rich Low_complexity Low_complexity 1 23 0 1 658 25 0 0 0 chrX 9596197 9596222 -12826605 + AT_rich Low_complexity Low_complexity 1 25 0 1 658 236 164 55 0 chrX 9597297 9597352 -12825475 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1 658 231 167 0 0 chrX 9597787 9597829 -12824998 + (CGGA)n Simple_repeat Simple_repeat 4 45 0 1 658 352 19 19 37 chrX 9598923 9598977 -12823850 + (CAG)n Simple_repeat Simple_repeat 2 54 0 1 658 21 0 0 0 chrX 9599312 9599333 -12823494 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 180 0 0 0 chrX 9600344 9600364 -12822463 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 658 26 0 0 0 chrX 9600746 9600772 -12822055 + AT_rich Low_complexity Low_complexity 1 26 0 1 658 189 0 0 0 chrX 9600986 9601007 -12821820 + (T)n Simple_repeat Simple_repeat 1 21 0 1 658 208 240 0 39 chrX 9602195 9602273 -12820554 + A-rich Low_complexity Low_complexity 2 76 0 1 658 238 145 16 31 chrX 9602872 9602936 -12819891 + T-rich Low_complexity Low_complexity 3 65 0 1 658 22 0 0 0 chrX 9603086 9603108 -12819719 + AT_rich Low_complexity Low_complexity 1 22 0 1 658 3414 177 10 10 chrX 9604927 9605725 -12817102 + SAR_DM Satellite Satellite 1 798 -571 1 658 30 45 0 0 chrX 9606506 9606550 -12816277 + AT_rich Low_complexity Low_complexity 1 44 0 1 658 276 111 0 0 chrX 9606929 9606974 -12815853 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 658 180 0 0 0 chrX 9607018 9607038 -12815789 + (ACTG)n Simple_repeat Simple_repeat 1 20 0 1 658 21 0 0 0 chrX 9607868 9607889 -12814938 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 198 176 0 0 chrX 9608009 9608060 -12814767 + A-rich Low_complexity Low_complexity 1 51 0 1 658 195 139 0 0 chrX 9608587 9608623 -12814204 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 658 186 71 0 0 chrX 9609047 9609075 -12813752 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1 658 222 37 0 0 chrX 9609251 9609278 -12813549 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 658 25 0 0 0 chrX 9609389 9609414 -12813413 + AT_rich Low_complexity Low_complexity 1 25 0 1 658 206 260 0 0 chrX 9610242 9610292 -12812535 + T-rich Low_complexity Low_complexity 1 50 0 1 658 189 0 0 0 chrX 9610743 9610764 -12812063 + (CAG)n Simple_repeat Simple_repeat 3 23 0 1 658 195 184 0 0 chrX 9611081 9611119 -12811708 + T-rich Low_complexity Low_complexity 1 38 0 1 658 242 206 32 0 chrX 9612128 9612191 -12810636 + A-rich Low_complexity Low_complexity 3 67 0 1 658 37 39 0 0 chrX 9613416 9613467 -12809360 + AT_rich Low_complexity Low_complexity 1 51 0 1 658 28 48 0 0 chrX 9613487 9613529 -12809298 + AT_rich Low_complexity Low_complexity 1 42 0 1 658 256 254 0 0 chrX 9614115 9614170 -12808657 + CT-rich Low_complexity Low_complexity 2 56 0 1 658 282 56 0 0 chrX 9614281 9614317 -12808510 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1 658 198 143 0 0 chrX 9614771 9614806 -12808021 + (A)n Simple_repeat Simple_repeat 1 35 0 1 658 208 250 0 0 chrX 9615165 9615221 -12807606 + T-rich Low_complexity Low_complexity 1 56 0 1 658 372 59 0 0 chrX 9615313 9615364 -12807463 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 1 658 216 309 0 0 chrX 9615369 9615437 -12807390 + A-rich Low_complexity Low_complexity 3 70 0 1 658 265 302 0 0 chrX 9615675 9615771 -12807056 + A-rich Low_complexity Low_complexity 1 96 0 1 658 186 143 0 0 chrX 9616182 9616217 -12806610 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 1 658 23 33 0 0 chrX 9616446 9616476 -12806351 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 251 122 0 20 chrX 9616485 9616535 -12806292 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 658 192 77 0 0 chrX 9617933 9617959 -12804868 + (CTG)n Simple_repeat Simple_repeat 2 27 0 1 658 27 0 0 0 chrX 9619039 9619066 -12803761 + AT_rich Low_complexity Low_complexity 1 27 0 1 658 4537 198 34 30 chrX 9619608 9621314 -12801513 - SAR_DM Satellite Satellite -239 1712 1 1 658 350 322 11 17 chrX 9621181 9621355 -12801472 + XDMR Unknown Unknown 1 173 -188 1 658 25 75 0 0 chrX 9621954 9622007 -12800820 + AT_rich Low_complexity Low_complexity 1 53 0 1 658 198 0 0 0 chrX 9623386 9623408 -12799419 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 658 252 271 0 0 chrX 9623594 9623653 -12799174 + (CGG)n Simple_repeat Simple_repeat 3 61 0 1 658 483 148 8 25 chrX 9623779 9623897 -12798930 + (CAAA)n Simple_repeat Simple_repeat 1 116 0 1 658 26 0 0 0 chrX 9623995 9624021 -12798806 + AT_rich Low_complexity Low_complexity 1 26 0 1 658 284 0 0 27 chrX 9624243 9624280 -12798547 + (CTGTG)n Simple_repeat Simple_repeat 4 39 0 1 658 285 266 0 26 chrX 9624487 9624603 -12798224 + ROO_I LTR Pao 639 751 -7505 1 658 21 0 0 0 chrX 9626491 9626512 -12796315 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 195 69 0 0 chrX 9626999 9627028 -12795799 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 658 185 108 27 0 chrX 9628763 9628800 -12794027 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 658 291 114 0 0 chrX 9628921 9628965 -12793862 + (AACTG)n Simple_repeat Simple_repeat 1 44 0 1 658 243 161 0 0 chrX 9628968 9629024 -12793803 + (ACTG)n Simple_repeat Simple_repeat 2 57 0 1 658 260 70 23 0 chrX 9629150 9629193 -12793634 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 658 22 35 0 0 chrX 9630116 9630145 -12792682 + AT_rich Low_complexity Low_complexity 1 29 0 1 658 216 196 0 0 chrX 9630373 9630419 -12792408 + T-rich Low_complexity Low_complexity 1 46 0 1 658 249 108 0 0 chrX 9631079 9631116 -12791711 + (ATG)n Simple_repeat Simple_repeat 1 37 0 1 658 249 119 0 0 chrX 9633217 9633259 -12789568 + (CAA)n Simple_repeat Simple_repeat 3 44 0 1 658 236 79 30 60 chrX 9633416 9633483 -12789344 + T-rich Low_complexity Low_complexity 2 66 0 1 658 247 218 0 94 chrX 9633781 9633877 -12788950 + ROO_I LTR Pao 657 743 -7513 1 658 209 200 0 20 chrX 9634011 9634062 -12788765 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 658 234 0 0 0 chrX 9634482 9634508 -12788319 + (TGGA)n Simple_repeat Simple_repeat 4 29 0 1 658 210 71 0 0 chrX 9634690 9634718 -12788109 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 1 658 205 182 0 0 chrX 9635668 9635712 -12787115 + A-rich Low_complexity Low_complexity 1 44 0 1 658 378 42 0 0 chrX 9636929 9636977 -12785850 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 658 249 185 0 0 chrX 9638142 9638207 -12784620 + CT-rich Low_complexity Low_complexity 1 65 0 1 658 195 42 0 0 chrX 9638255 9638279 -12784548 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 658 243 188 21 0 chrX 9638442 9638490 -12784337 + CT-rich Low_complexity Low_complexity 1 49 0 1 658 342 115 0 0 chrX 9639037 9639098 -12783729 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 1 658 218 204 0 0 chrX 9639342 9639391 -12783436 + T-rich Low_complexity Low_complexity 1 49 0 1 658 212 167 0 0 chrX 9641847 9641889 -12780938 + A-rich Low_complexity Low_complexity 1 42 0 1 658 22 0 0 0 chrX 9641946 9641968 -12780859 + AT_rich Low_complexity Low_complexity 1 22 0 1 658 231 36 0 0 chrX 9643605 9643633 -12779194 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 658 212 284 10 10 chrX 9643790 9643886 -12778941 + CT-rich Low_complexity Low_complexity 2 97 0 1 658 231 167 0 0 chrX 9644689 9644731 -12778096 + (CTAA)n Simple_repeat Simple_repeat 1 42 0 1 658 222 62 0 0 chrX 9644766 9644798 -12778029 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 658 235 235 0 19 chrX 9645120 9645172 -12777655 + (TATG)n Simple_repeat Simple_repeat 1 51 0 1 658 25 31 0 0 chrX 9645628 9645660 -12777167 + AT_rich Low_complexity Low_complexity 1 32 0 1 658 206 180 20 20 chrX 9645887 9645938 -12776889 + (TTG)n Simple_repeat Simple_repeat 1 51 0 1 658 224 189 0 0 chrX 9647197 9647234 -12775593 + (CGG)n Simple_repeat Simple_repeat 1 37 0 1 658 186 191 0 0 chrX 9648118 9648160 -12774667 + (CGG)n Simple_repeat Simple_repeat 1 42 0 1 658 915 120 0 0 chrX 9649011 9649169 -12773658 + (CAG)n Simple_repeat Simple_repeat 1 158 0 1 658 24 0 0 0 chrX 9649383 9649407 -12773420 + AT_rich Low_complexity Low_complexity 1 24 0 1 658 32 26 0 0 chrX 9649540 9649579 -12773248 + AT_rich Low_complexity Low_complexity 1 39 0 1 658 183 42 0 0 chrX 9649826 9649850 -12772977 + (A)n Simple_repeat Simple_repeat 1 24 0 1 658 222 116 0 0 chrX 9650225 9650268 -12772559 + (A)n Simple_repeat Simple_repeat 1 43 0 1 658 35 24 0 0 chrX 9652274 9652316 -12770511 + AT_rich Low_complexity Low_complexity 1 42 0 1 658 203 88 29 0 chrX 9653550 9653584 -12769243 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 658 26 0 0 0 chrX 9653918 9653944 -12768883 + AT_rich Low_complexity Low_complexity 1 26 0 1 658 261 260 0 27 chrX 9654383 9654458 -12768369 + CT-rich Low_complexity Low_complexity 3 75 0 1 658 21 0 0 0 chrX 9655483 9655504 -12767323 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 288 70 0 0 chrX 9656912 9656955 -12765872 + (ATTCG)n Simple_repeat Simple_repeat 3 45 0 1 658 21 0 0 0 chrX 9657205 9657226 -12765601 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 30 27 0 0 chrX 9658754 9658791 -12764036 + AT_rich Low_complexity Low_complexity 1 37 0 1 658 23 0 0 0 chrX 9658897 9658920 -12763907 + AT_rich Low_complexity Low_complexity 1 23 0 1 658 21 0 0 0 chrX 9658943 9658964 -12763863 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 24 0 0 0 chrX 9659290 9659314 -12763513 + AT_rich Low_complexity Low_complexity 1 24 0 1 658 207 0 0 0 chrX 9659656 9659679 -12763148 + (T)n Simple_repeat Simple_repeat 1 23 0 1 658 21 0 0 0 chrX 9659924 9659945 -12762882 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 34 24 0 0 chrX 9660494 9660535 -12762292 + AT_rich Low_complexity Low_complexity 1 41 0 1 658 24 0 0 0 chrX 9661418 9661442 -12761385 + AT_rich Low_complexity Low_complexity 1 24 0 1 658 23 0 0 0 chrX 9661497 9661520 -12761307 + AT_rich Low_complexity Low_complexity 1 23 0 1 658 251 289 0 0 chrX 9661879 9661955 -12760872 + T-rich Low_complexity Low_complexity 1 76 0 1 658 21 57 0 0 chrX 9662938 9662973 -12759854 + AT_rich Low_complexity Low_complexity 1 35 0 1 658 183 129 0 0 chrX 9664208 9664239 -12758588 + (A)n Simple_repeat Simple_repeat 1 31 0 1 658 21 0 0 0 chrX 9665200 9665221 -12757606 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 264 165 12 60 chrX 9665320 9665404 -12757423 + (CTG)n Simple_repeat Simple_repeat 1 80 0 1 658 204 118 0 29 chrX 9665437 9665472 -12757355 + (TTG)n Simple_repeat Simple_repeat 3 36 0 1 658 1735 222 23 17 chrX 9666193 9666832 -12755995 + SAR_DM Satellite Satellite 1 642 -512 1 658 311 256 43 65 chrX 9666710 9666894 -12755933 - XDMR_DM Unknown Unknown -71 289 110 1 658 24 0 0 0 chrX 9667833 9667857 -12754970 + AT_rich Low_complexity Low_complexity 1 24 0 1 658 245 135 0 19 chrX 9668443 9668496 -12754331 + (CTG)n Simple_repeat Simple_repeat 2 53 0 1 658 23 0 0 0 chrX 9668919 9668942 -12753885 + AT_rich Low_complexity Low_complexity 1 23 0 1 658 28 0 0 0 chrX 9669594 9669622 -12753205 + AT_rich Low_complexity Low_complexity 1 28 0 1 658 255 114 0 0 chrX 9673297 9673341 -12749486 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 658 216 135 0 0 chrX 9676465 9676502 -12746325 + (TTGG)n Simple_repeat Simple_repeat 2 38 0 1 658 26 30 0 0 chrX 9676899 9676932 -12745895 + AT_rich Low_complexity Low_complexity 1 33 0 1 658 228 143 0 0 chrX 9677952 9677994 -12744833 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 658 214 186 0 0 chrX 9679172 9679215 -12743612 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 658 192 77 0 0 chrX 9681077 9681103 -12741724 + (A)n Simple_repeat Simple_repeat 1 26 0 1 658 201 39 0 0 chrX 9683070 9683096 -12739731 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 658 35 0 0 0 chrX 9683614 9683649 -12739178 + AT_rich Low_complexity Low_complexity 1 35 0 1 658 202 304 0 0 chrX 9684572 9684618 -12738209 + (CATA)n Simple_repeat Simple_repeat 4 49 0 1 658 252 59 0 0 chrX 9685030 9685064 -12737763 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 658 29 0 0 0 chrX 9685177 9685206 -12737621 + AT_rich Low_complexity Low_complexity 1 29 0 1 658 261 207 52 0 chrX 9685372 9685430 -12737397 + (CCCCAA)n Simple_repeat Simple_repeat 2 62 0 1 658 192 40 0 0 chrX 9686266 9686291 -12736536 + (CAT)n Simple_repeat Simple_repeat 3 27 0 1 658 201 139 0 0 chrX 9686371 9686414 -12736413 + (T)n Simple_repeat Simple_repeat 1 43 0 1 658 348 133 0 0 chrX 9687286 9687346 -12735481 + (CAGTT)n Simple_repeat Simple_repeat 1 60 0 1 658 198 150 0 0 chrX 9687520 9687560 -12735267 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 658 258 116 0 0 chrX 9688858 9688901 -12733926 + (CGAAT)n Simple_repeat Simple_repeat 3 45 0 1 658 273 29 0 0 chrX 9689143 9689177 -12733650 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 658 27 0 0 0 chrX 9690055 9690082 -12732745 + AT_rich Low_complexity Low_complexity 1 27 0 1 658 255 140 0 0 chrX 9691602 9691652 -12731175 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 658 26 0 0 0 chrX 9691819 9691845 -12730982 + AT_rich Low_complexity Low_complexity 1 26 0 1 658 201 121 0 0 chrX 9692578 9692611 -12730216 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 658 3361 5 7 7 chrX 9692611 9693024 -12729803 - DM297_LTR LTR Gypsy -1 413 1 1 658 51143 7 0 0 chrX 9693024 9699191 -12723636 - DM297_I LTR Gypsy 0 6167 1 1 82 3368 5 7 7 chrX 9699191 9699605 -12723222 - DM297_LTR LTR Gypsy 0 414 1 1 659 182 37 0 36 chrX 9699979 9700007 -12722820 + (GAATG)n Simple_repeat Simple_repeat 3 29 0 1 659 312 70 0 0 chrX 9700048 9700091 -12722736 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 659 293 93 19 0 chrX 9700589 9700643 -12722184 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 659 204 111 0 0 chrX 9700930 9700966 -12721861 + (T)n Simple_repeat Simple_repeat 1 36 0 1 659 225 0 0 0 chrX 9701095 9701120 -12721707 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1 659 27 0 0 0 chrX 9701369 9701396 -12721431 + AT_rich Low_complexity Low_complexity 1 27 0 1 659 210 91 0 0 chrX 9701866 9701899 -12720928 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 659 24 0 0 0 chrX 9702191 9702215 -12720612 + AT_rich Low_complexity Low_complexity 1 24 0 1 659 4345 178 21 20 chrX 9702607 9704508 -12718319 - SAR_DM Satellite Satellite -434 1903 1 1 659 580 272 24 16 chrX 9704348 9704602 -12718225 + XDMR Unknown Unknown 1 256 -105 1 659 192 97 0 0 chrX 9705344 9705375 -12717452 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 659 213 132 0 0 chrX 9705920 9705958 -12716869 + (GACTG)n Simple_repeat Simple_repeat 4 41 0 1 659 198 0 0 0 chrX 9707802 9707824 -12715003 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 659 233 216 0 0 chrX 9708455 9708506 -12714321 + C-rich Low_complexity Low_complexity 3 53 0 1 659 43 0 0 0 chrX 9708971 9709014 -12713813 + AT_rich Low_complexity Low_complexity 1 43 0 1 659 234 62 0 0 chrX 9709419 9709451 -12713376 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 659 186 156 0 0 chrX 9709461 9709506 -12713321 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 659 192 40 0 0 chrX 9709559 9709584 -12713243 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 659 368 118 0 14 chrX 9709769 9709838 -12712989 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 659 180 0 0 0 chrX 9711266 9711286 -12711541 + (C)n Simple_repeat Simple_repeat 1 20 0 1 659 24 0 0 0 chrX 9711524 9711548 -12711279 + AT_rich Low_complexity Low_complexity 1 24 0 1 659 200 217 0 0 chrX 9712028 9712074 -12710753 + T-rich Low_complexity Low_complexity 1 46 0 1 659 192 158 0 0 chrX 9712452 9712490 -12710337 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 659 246 32 0 0 chrX 9713734 9713765 -12709062 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 659 192 77 0 0 chrX 9713873 9713899 -12708928 + (CAAGC)n Simple_repeat Simple_repeat 4 29 0 1 659 226 264 0 0 chrX 9715712 9715765 -12707062 + A-rich Low_complexity Low_complexity 1 53 0 1 659 24 0 0 0 chrX 9716324 9716348 -12706479 + AT_rich Low_complexity Low_complexity 1 24 0 1 659 206 227 0 13 chrX 9716780 9716856 -12705971 + (CA)n Simple_repeat Simple_repeat 1 75 0 1 659 21 36 0 0 chrX 9717849 9717877 -12704950 + AT_rich Low_complexity Low_complexity 1 28 0 1 659 231 203 0 0 chrX 9718302 9718361 -12704466 + (TCCG)n Simple_repeat Simple_repeat 3 61 0 1 659 24 53 0 0 chrX 9718547 9718585 -12704242 + AT_rich Low_complexity Low_complexity 1 38 0 1 659 209 33 0 32 chrX 9719046 9719068 -12703759 + (CAG)n Simple_repeat Simple_repeat 3 24 0 1 659 351 0 0 0 chrX 9719068 9719107 -12703720 + (CCA)n Simple_repeat Simple_repeat 3 41 0 1 659 209 33 0 32 chrX 9719107 9719115 -12703712 + (CAG)n Simple_repeat Simple_repeat 1 8 0 1 659 216 0 0 0 chrX 9719936 9719960 -12702867 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 659 22 56 0 0 chrX 9723214 9723250 -12699577 + AT_rich Low_complexity Low_complexity 1 36 0 1 659 204 40 0 0 chrX 9725019 9725044 -12697783 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1 659 585 28 0 0 chrX 9729024 9729095 -12693732 + (CAGC)n Simple_repeat Simple_repeat 1 71 0 1 659 216 0 0 0 chrX 9729871 9729895 -12692932 + (TGG)n Simple_repeat Simple_repeat 2 25 0 1 659 21 57 0 0 chrX 9731639 9731674 -12691153 + AT_rich Low_complexity Low_complexity 1 35 0 1 659 321 164 0 0 chrX 9732664 9732737 -12690090 + (AGTTG)n Simple_repeat Simple_repeat 1 73 0 1 659 1770 148 9 0 chrX 9734847 9735165 -12687662 - SAR_DM Satellite Satellite -582 890 570 1 659 469 266 62 0 chrX 9735020 9735197 -12687630 + XDMR Unknown Unknown 1 188 -173 1 659 301 215 127 49 chrX 9735194 9735336 -12687491 - SAR_DM Satellite Satellite -1091 381 229 1 659 292 295 36 0 chrX 9735257 9735369 -12687458 + XDMR_DM Unknown Unknown 18 133 -227 1 659 182 150 0 24 chrX 9736746 9736787 -12686040 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 659 229 250 0 0 chrX 9736978 9737022 -12685805 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 659 23 0 0 0 chrX 9738086 9738109 -12684718 + AT_rich Low_complexity Low_complexity 1 23 0 1 659 28 0 0 0 chrX 9738290 9738318 -12684509 + AT_rich Low_complexity Low_complexity 1 28 0 1 659 22 0 0 0 chrX 9738914 9738936 -12683891 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 195 42 0 0 chrX 9739211 9739235 -12683592 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 659 294 73 0 0 chrX 9739334 9739375 -12683452 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 659 198 0 0 0 chrX 9740691 9740713 -12682114 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 659 267 146 0 0 chrX 9740914 9740969 -12681858 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 659 198 143 0 0 chrX 9741690 9741725 -12681102 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 659 198 71 0 0 chrX 9741897 9741925 -12680902 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1 659 213 94 0 0 chrX 9741949 9741981 -12680846 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 659 198 0 0 0 chrX 9744611 9744633 -12678194 + (T)n Simple_repeat Simple_repeat 1 22 0 1 659 209 217 0 0 chrX 9744822 9744868 -12677959 + T-rich Low_complexity Low_complexity 1 46 0 1 659 21 0 0 0 chrX 9746008 9746029 -12676798 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 227 133 0 22 chrX 9746804 9746850 -12675977 + (CAG)n Simple_repeat Simple_repeat 3 47 0 1 659 183 139 0 0 chrX 9746983 9747019 -12675808 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 659 209 254 34 0 chrX 9747816 9747875 -12674952 + (TCTG)n Simple_repeat Simple_repeat 4 64 0 1 659 251 192 0 0 chrX 9747866 9747918 -12674909 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 659 297 204 20 88 chrX 9747992 9748094 -12674733 - ROO_I LTR Pao -7512 744 650 1 659 23 0 0 0 chrX 9748597 9748620 -12674207 + AT_rich Low_complexity Low_complexity 1 23 0 1 659 240 86 0 0 chrX 9749299 9749334 -12673493 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 659 248 299 10 0 chrX 9749431 9749528 -12673299 + (TA)n Simple_repeat Simple_repeat 1 98 0 1 659 25 36 0 52 chrX 9749847 9749905 -12672922 + AT_rich Low_complexity Low_complexity 1 55 0 1 659 29 0 0 0 chrX 9750255 9750284 -12672543 + AT_rich Low_complexity Low_complexity 1 29 0 1 659 247 25 0 48 chrX 9753800 9753842 -12668985 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 659 247 49 0 47 chrX 9757008 9757051 -12665776 + (TTATG)n Simple_repeat Simple_repeat 5 45 0 1 659 24 53 0 0 chrX 9757051 9757089 -12665738 + AT_rich Low_complexity Low_complexity 1 38 0 1 659 198 91 0 0 chrX 9762773 9762806 -12660021 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 1 659 3039 138 9 13 chrX 9764054 9764606 -12658221 - SAR_DM Satellite Satellite -728 744 195 1 659 511 224 0 0 chrX 9764515 9764631 -12658196 + ARS406_DM Unknown Unknown 3 118 -235 1 659 23 0 0 0 chrX 9765097 9765120 -12657707 + AT_rich Low_complexity Low_complexity 1 23 0 1 659 201 39 0 0 chrX 9766289 9766315 -12656512 + (A)n Simple_repeat Simple_repeat 1 26 0 1 659 24 67 0 0 chrX 9767421 9767466 -12655361 + AT_rich Low_complexity Low_complexity 1 45 0 1 659 28 71 0 0 chrX 9768778 9768834 -12653993 + AT_rich Low_complexity Low_complexity 1 56 0 1 659 201 108 0 0 chrX 9769772 9769809 -12653018 + (TCC)n Simple_repeat Simple_repeat 3 39 0 1 659 28 0 0 0 chrX 9770926 9770954 -12651873 + AT_rich Low_complexity Low_complexity 1 28 0 1 659 30 27 0 0 chrX 9771051 9771088 -12651739 + AT_rich Low_complexity Low_complexity 1 37 0 1 659 225 151 0 0 chrX 9772893 9772946 -12649881 + (CCA)n Simple_repeat Simple_repeat 3 55 0 1 659 234 330 0 0 chrX 9772948 9773039 -12649788 + (CCCGAA)n Simple_repeat Simple_repeat 2 92 0 1 659 232 290 0 0 chrX 9774597 9774666 -12648161 - XDMR Unknown Unknown -223 138 70 1 659 345 231 0 37 chrX 9774702 9774810 -12648017 - XDMR_DM Unknown Unknown -251 109 6 1 659 3411 169 11 10 chrX 9774714 9775438 -12647389 + SAR_DM Satellite Satellite 225 949 -523 1 659 330 150 0 0 chrX 9775441 9775501 -12647326 - ARS406_DM Unknown Unknown -181 172 113 1 659 217 224 0 0 chrX 9776381 9776430 -12646397 + GA-rich Low_complexity Low_complexity 2 50 0 1 659 29 47 0 0 chrX 9776683 9776726 -12646101 + AT_rich Low_complexity Low_complexity 1 43 0 1 659 33 0 0 0 chrX 9777511 9777544 -12645283 + AT_rich Low_complexity Low_complexity 1 33 0 1 659 23 33 0 0 chrX 9777982 9778012 -12644815 + AT_rich Low_complexity Low_complexity 1 30 0 1 659 21 71 0 0 chrX 9778208 9778250 -12644577 + AT_rich Low_complexity Low_complexity 1 42 0 1 659 30 27 0 0 chrX 9781807 9781844 -12640983 + AT_rich Low_complexity Low_complexity 1 37 0 1 659 21 57 0 0 chrX 9781858 9781893 -12640934 + AT_rich Low_complexity Low_complexity 1 35 0 1 659 22 70 0 0 chrX 9784308 9784351 -12638476 + AT_rich Low_complexity Low_complexity 1 43 0 1 659 22 35 0 0 chrX 9784461 9784490 -12638337 + AT_rich Low_complexity Low_complexity 1 29 0 1 659 384 88 0 0 chrX 9785380 9785437 -12637390 + (CAA)n Simple_repeat Simple_repeat 1 57 0 1 659 258 236 0 0 chrX 9787635 9787690 -12635137 + (ATTCG)n Simple_repeat Simple_repeat 5 59 0 1 659 246 143 0 0 chrX 9788265 9788314 -12634513 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 659 192 152 0 0 chrX 9788468 9788501 -12634326 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 659 255 167 0 0 chrX 9789625 9789691 -12633136 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 659 22 0 0 0 chrX 9790699 9790721 -12632106 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 221 253 21 21 chrX 9791641 9791738 -12631089 + A-rich Low_complexity Low_complexity 1 97 0 1 659 21 0 0 0 chrX 9793118 9793139 -12629688 + AT_rich Low_complexity Low_complexity 1 21 0 1 659 202 262 33 13 chrX 9793899 9794050 -12628777 + (TA)n Simple_repeat Simple_repeat 2 155 0 1 659 22 0 0 0 chrX 9795553 9795575 -12627252 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 23 68 0 0 chrX 9795658 9795702 -12627125 + AT_rich Low_complexity Low_complexity 1 44 0 1 659 22 0 0 0 chrX 9795993 9796015 -12626812 + AT_rich Low_complexity Low_complexity 1 22 0 1 659 32 67 0 0 chrX 9796192 9796252 -12626575 + AT_rich Low_complexity Low_complexity 1 60 0 1 659 27 49 0 0 chrX 9796358 9796399 -12626428 + AT_rich Low_complexity Low_complexity 1 41 0 1 659 24 32 0 0 chrX 9797080 9797111 -12625716 + AT_rich Low_complexity Low_complexity 1 31 0 1 659 207 0 0 0 chrX 9797613 9797636 -12625191 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 659 3691 158 12 12 chrX 9798966 9799770 -12623057 - SAR_DM Satellite Satellite -220 1252 181 1 659 1148 152 19 9 chrX 9799580 9799793 -12623034 + ARS406_DM Unknown Unknown 1 215 -138 1 659 204 67 0 0 chrX 9801653 9801683 -12621144 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 659 26 93 0 0 chrX 9802581 9802656 -12620171 + AT_rich Low_complexity Low_complexity 1 75 0 1 659 23 0 0 0 chrX 9807731 9807754 -12615073 + AT_rich Low_complexity Low_complexity 1 23 0 1 659 183 129 0 0 chrX 9809125 9809156 -12613671 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 659 228 67 0 0 chrX 9809602 9809632 -12613195 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 659 180 0 0 0 chrX 9810606 9810626 -12612201 + (C)n Simple_repeat Simple_repeat 1 20 0 1 659 247 204 0 0 chrX 9810853 9810907 -12611920 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 659 180 152 0 0 chrX 9811335 9811368 -12611459 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 659 40 59 0 0 chrX 9811496 9811564 -12611263 + AT_rich Low_complexity Low_complexity 1 68 0 1 659 216 83 62 0 chrX 9811872 9811920 -12610907 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 659 35 0 0 0 chrX 9812100 9812135 -12610692 + AT_rich Low_complexity Low_complexity 1 35 0 1 659 4528 188 17 25 chrX 9813303 9814349 -12608478 + SAR_DM Satellite Satellite 215 1252 -220 1 659 352 191 105 113 chrX 9814974 9815098 -12607729 + DNAREP1_DM LINE Penelope 454 576 -18 1 659 207 203 0 0 chrX 9815349 9815408 -12607419 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 659 384 167 0 0 chrX 9822176 9822236 -12600591 + DNAREP1_DM LINE Penelope 1 60 -534 1 659 204 40 0 0 chrX 9826043 9826068 -12596759 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 659 277 191 0 45 chrX 9826287 9826353 -12596474 + T-rich Low_complexity Low_complexity 5 67 0 1 659 209 217 0 0 chrX 9826439 9826485 -12596342 + (CATATA)n Simple_repeat Simple_repeat 6 51 0 1 659 286 139 14 14 chrX 9829657 9829730 -12593097 + (ACTG)n Simple_repeat Simple_repeat 4 76 0 1 659 25 0 0 0 chrX 9830200 9830225 -12592602 + AT_rich Low_complexity Low_complexity 1 25 0 1 660 252 0 0 0 chrX 9832674 9832702 -12590125 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 660 186 43 0 0 chrX 9833284 9833307 -12589520 + (TGGA)n Simple_repeat Simple_repeat 1 23 0 1 660 192 125 0 0 chrX 9833366 9833398 -12589429 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 660 25 83 0 0 chrX 9834014 9834074 -12588753 + AT_rich Low_complexity Low_complexity 1 60 0 1 660 186 43 0 0 chrX 9834797 9834820 -12588007 + (A)n Simple_repeat Simple_repeat 1 23 0 1 660 252 111 0 0 chrX 9835200 9835245 -12587582 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 660 1683 171 21 68 chrX 9835553 9835981 -12586846 + SAR_DM Satellite Satellite 472 879 -593 1 660 481 93 0 96 chrX 9835917 9836000 -12586827 - ARS406_DM Unknown Unknown -164 189 115 1 660 33 0 0 0 chrX 9837800 9837833 -12584994 + AT_rich Low_complexity Low_complexity 1 33 0 1 660 21 0 0 0 chrX 9838045 9838066 -12584761 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 237 159 0 0 chrX 9838453 9838497 -12584330 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 660 21 0 0 0 chrX 9838780 9838801 -12584026 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 204 40 0 0 chrX 9838918 9838943 -12583884 + (CATTT)n Simple_repeat Simple_repeat 1 25 0 1 660 23 0 0 0 chrX 9840308 9840331 -12582496 + AT_rich Low_complexity Low_complexity 1 23 0 1 660 213 65 0 0 chrX 9842511 9842542 -12580285 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 660 21 36 0 0 chrX 9843295 9843323 -12579504 + AT_rich Low_complexity Low_complexity 1 28 0 1 660 23 0 0 0 chrX 9844850 9844873 -12577954 + AT_rich Low_complexity Low_complexity 1 23 0 1 660 247 222 16 16 chrX 9844885 9844949 -12577878 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 660 243 0 0 0 chrX 9849104 9849131 -12573696 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 660 251 226 0 0 chrX 9849289 9849342 -12573485 - DNAREP1_DM LINE Penelope -541 53 1 1 660 245 258 0 0 chrX 9849541 9849607 -12573220 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 660 913 236 91 26 chrX 9849890 9850229 -12572598 + XDMR Unknown Unknown 1 361 0 1 660 3949 194 40 25 chrX 9849926 9851046 -12571781 - SAR_DM Satellite Satellite -446 1137 1 1 660 209 371 0 0 chrX 9851748 9851853 -12570974 + GA-rich Low_complexity Low_complexity 2 106 0 1 660 205 191 0 0 chrX 9851960 9852002 -12570825 + T-rich Low_complexity Low_complexity 1 42 0 1 660 189 121 0 0 chrX 9852139 9852172 -12570655 + (A)n Simple_repeat Simple_repeat 1 33 0 1 660 248 254 0 0 chrX 9852354 9852413 -12570414 + (ATG)n Simple_repeat Simple_repeat 1 59 0 1 660 189 196 0 0 chrX 9852755 9852801 -12570026 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 660 195 69 0 0 chrX 9853267 9853296 -12569531 + (TTTTTG)n Simple_repeat Simple_repeat 1 29 0 1 660 236 271 0 0 chrX 9853532 9853602 -12569225 + A-rich Low_complexity Low_complexity 1 70 0 1 660 22 0 0 0 chrX 9856721 9856743 -12566084 + AT_rich Low_complexity Low_complexity 1 22 0 1 660 21 0 0 0 chrX 9856781 9856802 -12566025 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 228 135 0 0 chrX 9859321 9859358 -12563469 + (TTAG)n Simple_repeat Simple_repeat 4 40 0 1 660 25 65 0 0 chrX 9861988 9862034 -12560793 + AT_rich Low_complexity Low_complexity 1 46 0 1 660 1655 190 67 33 chrX 9865336 9865766 -12557061 + SAR_DM Satellite Satellite 415 859 -613 1 660 204 167 0 0 chrX 9866275 9866323 -12556504 + (CGATA)n Simple_repeat Simple_repeat 2 49 0 1 660 28 0 0 0 chrX 9868580 9868608 -12554219 + AT_rich Low_complexity Low_complexity 1 28 0 1 660 25 0 0 0 chrX 9870219 9870244 -12552583 + AT_rich Low_complexity Low_complexity 1 25 0 1 660 21 36 0 0 chrX 9870463 9870491 -12552336 + AT_rich Low_complexity Low_complexity 1 28 0 1 660 252 200 0 0 chrX 9871488 9871558 -12551269 + GA-rich Low_complexity Low_complexity 2 71 0 1 660 27 62 0 0 chrX 9871731 9871779 -12551048 + AT_rich Low_complexity Low_complexity 1 48 0 1 660 21 0 0 0 chrX 9875815 9875836 -12546991 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 2026 212 75 25 chrX 9877806 9878473 -12544354 + SAR_DM Satellite Satellite 439 1138 -334 1 660 201 180 0 0 chrX 9881723 9881773 -12541054 + (CGAAT)n Simple_repeat Simple_repeat 3 52 0 1 660 24 67 0 0 chrX 9882562 9882607 -12540220 + AT_rich Low_complexity Low_complexity 1 45 0 1 660 225 132 14 56 chrX 9883187 9883259 -12539568 + A-rich Low_complexity Low_complexity 3 71 0 1 660 21 0 0 0 chrX 9883857 9883878 -12538949 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 213 39 0 0 chrX 9884134 9884160 -12538667 + (A)n Simple_repeat Simple_repeat 1 26 0 1 660 417 161 0 0 chrX 9885122 9885209 -12537618 + GA-rich Low_complexity Low_complexity 1 87 0 1 660 210 192 0 0 chrX 9886339 9886391 -12536436 + CT-rich Low_complexity Low_complexity 1 52 0 1 660 22 70 0 0 chrX 9886508 9886551 -12536276 + AT_rich Low_complexity Low_complexity 1 43 0 1 660 26 30 0 0 chrX 9886852 9886885 -12535942 + AT_rich Low_complexity Low_complexity 1 33 0 1 660 230 200 0 18 chrX 9887010 9887066 -12535761 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 660 26 0 0 0 chrX 9888988 9889014 -12533813 + AT_rich Low_complexity Low_complexity 1 26 0 1 660 186 43 0 0 chrX 9890024 9890047 -12532780 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 660 204 135 0 0 chrX 9891437 9891474 -12531353 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 660 251 54 27 0 chrX 9891569 9891606 -12531221 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 660 336 48 0 0 chrX 9892456 9892498 -12530329 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 660 26 82 0 0 chrX 9893163 9893224 -12529603 + AT_rich Low_complexity Low_complexity 1 61 0 1 660 24 32 0 0 chrX 9893349 9893380 -12529447 + AT_rich Low_complexity Low_complexity 1 31 0 1 660 219 69 0 0 chrX 9894951 9894980 -12527847 + (CCA)n Simple_repeat Simple_repeat 3 31 0 1 660 272 127 0 18 chrX 9895142 9895198 -12527629 + (CAA)n Simple_repeat Simple_repeat 2 56 0 1 660 216 86 0 0 chrX 9895283 9895318 -12527509 + (CAA)n Simple_repeat Simple_repeat 1 35 0 1 660 201 299 0 25 chrX 9896736 9896815 -12526012 + CT-rich Low_complexity Low_complexity 2 78 0 1 660 206 302 0 23 chrX 9897654 9897742 -12525085 + CT-rich Low_complexity Low_complexity 2 87 0 1 660 233 379 0 0 chrX 9899461 9899548 -12523279 + (CGG)n Simple_repeat Simple_repeat 2 88 0 1 660 212 120 20 0 chrX 9899941 9899991 -12522836 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 660 25 31 0 0 chrX 9900487 9900519 -12522308 + AT_rich Low_complexity Low_complexity 1 32 0 1 660 216 67 0 0 chrX 9900545 9900575 -12522252 + (ATG)n Simple_repeat Simple_repeat 3 32 0 1 660 25 31 0 0 chrX 9900891 9900923 -12521904 + AT_rich Low_complexity Low_complexity 1 32 0 1 660 3922 199 38 18 chrX 9901036 9902389 -12520438 - SAR_DM Satellite Satellite -630 1379 1 1 660 183 80 0 0 chrX 9902389 9902414 -12520413 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 660 22 0 0 0 chrX 9902564 9902586 -12520241 + AT_rich Low_complexity Low_complexity 1 22 0 1 660 366 74 0 0 chrX 9902762 9902816 -12520011 + (ACTG)n Simple_repeat Simple_repeat 1 54 0 1 660 38 51 0 0 chrX 9904092 9904151 -12518676 + AT_rich Low_complexity Low_complexity 1 59 0 1 660 21 0 0 0 chrX 9904344 9904365 -12518462 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 207 200 0 0 chrX 9908025 9908070 -12514757 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1 660 183 139 0 0 chrX 9908788 9908824 -12514003 + (AAATG)n Simple_repeat Simple_repeat 5 40 0 1 660 797 195 3 26 chrX 9908887 9909226 -12513601 + (TAG)n Simple_repeat Simple_repeat 1 331 0 1 660 198 103 0 0 chrX 9909818 9909847 -12512980 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1 660 41 66 0 0 chrX 9910157 9910233 -12512594 + AT_rich Low_complexity Low_complexity 1 76 0 1 660 237 65 0 0 chrX 9910809 9910840 -12511987 + (CTG)n Simple_repeat Simple_repeat 2 32 0 1 660 189 94 0 0 chrX 9911022 9911054 -12511773 + (T)n Simple_repeat Simple_repeat 1 32 0 1 660 246 62 0 0 chrX 9911453 9911485 -12511342 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 660 283 241 0 0 chrX 9911620 9911703 -12511124 + ROO_I LTR Pao 638 720 -7536 1 660 213 94 0 0 chrX 9911795 9911827 -12511000 + (A)n Simple_repeat Simple_repeat 1 32 0 1 660 213 65 0 0 chrX 9913113 9913144 -12509683 + (T)n Simple_repeat Simple_repeat 1 31 0 1 660 204 67 0 0 chrX 9914000 9914030 -12508797 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 660 209 200 0 0 chrX 9918632 9918672 -12504155 + (ATG)n Simple_repeat Simple_repeat 1 40 0 1 660 228 35 0 0 chrX 9920509 9920538 -12502289 + (AACTG)n Simple_repeat Simple_repeat 2 30 0 1 660 208 139 0 0 chrX 9921572 9921608 -12501219 + (TTTTTA)n Simple_repeat Simple_repeat 3 38 0 1 660 242 125 0 20 chrX 9921750 9921799 -12501028 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1 660 205 250 21 0 chrX 9921894 9921942 -12500885 + (CAG)n Simple_repeat Simple_repeat 3 51 0 1 660 219 150 0 0 chrX 9922306 9922346 -12500481 + (T)n Simple_repeat Simple_repeat 1 40 0 1 660 222 164 0 0 chrX 9923596 9923651 -12499176 + A-rich Low_complexity Low_complexity 1 55 0 1 660 240 158 0 0 chrX 9927638 9927695 -12495132 + (CAA)n Simple_repeat Simple_repeat 2 58 0 1 660 336 111 0 0 chrX 9927731 9927785 -12495042 + (CAA)n Simple_repeat Simple_repeat 1 54 0 1 660 334 211 0 37 chrX 9928079 9928187 -12494640 + (CAA)n Simple_repeat Simple_repeat 2 105 0 1 660 242 106 0 21 chrX 9928277 9928325 -12494502 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 660 204 111 0 0 chrX 9933340 9933376 -12489451 + (CAA)n Simple_repeat Simple_repeat 2 37 0 1 660 351 141 0 0 chrX 9934571 9934635 -12488192 + (ATG)n Simple_repeat Simple_repeat 1 64 0 1 660 204 125 0 0 chrX 9934913 9934945 -12487882 + (GGA)n Simple_repeat Simple_repeat 2 33 0 1 660 219 69 0 0 chrX 9935143 9935172 -12487655 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1 660 186 171 0 0 chrX 9936032 9936073 -12486754 + GA-rich Low_complexity Low_complexity 1 41 0 1 660 186 150 0 0 chrX 9938398 9938438 -12484389 + (CCA)n Simple_repeat Simple_repeat 2 41 0 1 660 23 0 0 0 chrX 9938918 9938941 -12483886 + AT_rich Low_complexity Low_complexity 1 23 0 1 660 26 30 0 0 chrX 9941259 9941292 -12481535 + AT_rich Low_complexity Low_complexity 1 33 0 1 660 183 42 0 0 chrX 9941648 9941672 -12481155 + (TTTCC)n Simple_repeat Simple_repeat 2 25 0 1 660 244 226 0 56 chrX 9942188 9942277 -12480550 + ROO_I LTR Pao 643 726 -7530 1 660 315 260 0 20 chrX 9942340 9942438 -12480389 + (CAG)n Simple_repeat Simple_repeat 3 98 0 1 660 3680 174 14 30 chrX 9942644 9943430 -12479397 + SAR_DM Satellite Satellite 1 773 -203 1 660 495 278 25 32 chrX 9943197 9943479 -12479348 - XDMR_DM Unknown Unknown -1 359 80 1 660 192 40 0 0 chrX 9944468 9944493 -12478334 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1 660 46 0 0 0 chrX 9947122 9947168 -12475659 + AT_rich Low_complexity Low_complexity 1 46 0 1 660 24 0 0 0 chrX 9950159 9950183 -12472644 + AT_rich Low_complexity Low_complexity 1 24 0 1 660 267 54 0 0 chrX 9950453 9950490 -12472337 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 660 26 0 0 0 chrX 9950645 9950671 -12472156 + AT_rich Low_complexity Low_complexity 1 26 0 1 660 198 71 0 0 chrX 9951124 9951152 -12471675 + (T)n Simple_repeat Simple_repeat 1 28 0 1 660 180 241 0 0 chrX 9951447 9951526 -12471301 + (TGG)n Simple_repeat Simple_repeat 2 80 0 1 660 182 174 0 21 chrX 9951817 9951864 -12470963 + GA-rich Low_complexity Low_complexity 1 46 0 1 660 26 0 0 0 chrX 9952169 9952195 -12470632 + AT_rich Low_complexity Low_complexity 1 26 0 1 660 226 133 22 0 chrX 9953358 9953403 -12469424 - DMRPR Unknown Unknown -104 181 136 1 660 228 86 0 0 chrX 9953623 9953658 -12469169 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 660 222 118 0 0 chrX 9953888 9953922 -12468905 + (CAGAGA)n Simple_repeat Simple_repeat 5 38 0 1 660 239 93 23 0 chrX 9953940 9953983 -12468844 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 660 189 121 0 0 chrX 9954053 9954086 -12468741 + (T)n Simple_repeat Simple_repeat 1 33 0 1 660 233 119 0 23 chrX 9954369 9954412 -12468415 + (CCTAG)n Simple_repeat Simple_repeat 2 43 0 1 660 204 97 0 0 chrX 9956925 9956956 -12465871 + (A)n Simple_repeat Simple_repeat 1 31 0 1 660 21 0 0 0 chrX 9957310 9957331 -12465496 + AT_rich Low_complexity Low_complexity 1 21 0 1 660 261 0 0 0 chrX 9957630 9957659 -12465168 + (CAGT)n Simple_repeat Simple_repeat 2 30 0 1 661 23 54 0 0 chrX 9962462 9962499 -12460328 + AT_rich Low_complexity Low_complexity 1 37 0 1 661 220 281 14 35 chrX 9964342 9964486 -12458341 + A-rich Low_complexity Low_complexity 4 144 0 1 661 237 224 0 0 chrX 9964581 9964630 -12458197 + CT-rich Low_complexity Low_complexity 1 49 0 1 661 22 0 0 0 chrX 9965375 9965397 -12457430 + AT_rich Low_complexity Low_complexity 1 22 0 1 661 252 77 0 0 chrX 9967585 9967624 -12455203 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 661 192 111 0 0 chrX 9969666 9969702 -12453125 + (T)n Simple_repeat Simple_repeat 1 36 0 1 661 22 70 0 0 chrX 9969804 9969847 -12452980 + AT_rich Low_complexity Low_complexity 1 43 0 1 661 200 217 0 0 chrX 9971023 9971069 -12451758 + T-rich Low_complexity Low_complexity 1 46 0 1 661 21 0 0 0 chrX 9971557 9971578 -12451249 + AT_rich Low_complexity Low_complexity 1 21 0 1 661 300 27 0 0 chrX 9971796 9971833 -12450994 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 661 206 118 0 0 chrX 9972547 9972581 -12450246 + (TCC)n Simple_repeat Simple_repeat 3 36 0 1 661 242 284 18 18 chrX 9976207 9976318 -12446509 + (CGG)n Simple_repeat Simple_repeat 1 111 0 1 661 22 56 0 0 chrX 9977100 9977136 -12445691 + AT_rich Low_complexity Low_complexity 1 36 0 1 661 204 296 0 0 chrX 9977759 9977847 -12444980 + GA-rich Low_complexity Low_complexity 2 89 0 1 661 33 0 0 0 chrX 9978810 9978843 -12443984 + AT_rich Low_complexity Low_complexity 1 33 0 1 661 25 31 0 0 chrX 9981198 9981230 -12441597 + AT_rich Low_complexity Low_complexity 1 32 0 1 661 25 0 0 0 chrX 9982927 9982952 -12439875 + AT_rich Low_complexity Low_complexity 1 25 0 1 661 22 0 0 0 chrX 9988895 9988917 -12433910 + AT_rich Low_complexity Low_complexity 1 22 0 1 661 372 191 0 0 chrX 9989161 9989250 -12433577 + (TA)n Simple_repeat Simple_repeat 2 90 0 1 661 3614 5 7 7 chrX 9989250 9989664 -12433163 + DM297_LTR LTR Gypsy 1 414 0 1 661 40217 7 0 0 chrX 9989664 9994170 -12428657 + DM297_I LTR Gypsy 1 4507 -1660 1 661 4683 13 0 0 chrX 9994155 9994711 -12428116 + DM297_I LTR Gypsy 5612 6167 0 1 661 3590 7 7 7 chrX 9994711 9995124 -12427703 + DM297_LTR LTR Gypsy 1 413 -1 1 661 279 0 0 0 chrX 9995124 9995155 -12427672 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 661 369 161 12 12 chrX 9995765 9995847 -12426980 + SAR_DM Satellite Satellite 555 636 -836 1 661 4668 11 98 0 chrX 9995846 9996852 -12425975 - PROTOP_A DNA P 0 1105 1 1 661 3136 152 33 8 chrX 9996854 9997459 -12425368 + SAR_DM Satellite Satellite 272 891 -581 1 661 485 159 11 0 chrX 9997383 9997471 -12425356 - ARS406_DM Unknown Unknown -164 189 101 1 661 249 191 21 0 chrX 9997473 9997520 -12425307 - DNAREP1_DM LINE Penelope -544 50 3 1 661 206 184 9 80 chrX 9998435 9998547 -12424280 + (CAA)n Simple_repeat Simple_repeat 2 105 0 1 661 267 140 0 0 chrX 9999632 9999682 -12423145 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 661 22 35 0 0 chrX 10000455 10000484 -12422343 + AT_rich Low_complexity Low_complexity 1 29 0 1 661 22 0 0 0 chrX 10000568 10000590 -12422237 + AT_rich Low_complexity Low_complexity 1 22 0 1 661 201 171 0 0 chrX 10001262 10001297 -12421530 + T-rich Low_complexity Low_complexity 1 35 0 1 661 24 0 0 0 chrX 10002310 10002334 -12420493 + AT_rich Low_complexity Low_complexity 1 24 0 1 661 192 125 0 0 chrX 10003130 10003162 -12419665 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1 661 222 240 0 0 chrX 10003589 10003639 -12419188 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 661 209 191 0 0 chrX 10004331 10004373 -12418454 + (TCTG)n Simple_repeat Simple_repeat 1 42 0 1 661 214 204 0 18 chrX 10005163 10005218 -12417609 + T-rich Low_complexity Low_complexity 5 58 0 1 661 255 61 0 0 chrX 10005439 10005472 -12417355 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 661 223 318 0 0 chrX 10005698 10005764 -12417063 + C-rich Low_complexity Low_complexity 6 71 0 1 661 249 83 0 0 chrX 10005878 10005914 -12416913 + (CTG)n Simple_repeat Simple_repeat 3 38 0 1 661 23 0 0 0 chrX 10006302 10006325 -12416502 + AT_rich Low_complexity Low_complexity 1 23 0 1 661 24 32 0 0 chrX 10006340 10006371 -12416456 + AT_rich Low_complexity Low_complexity 1 31 0 1 661 246 128 0 0 chrX 10006520 10006559 -12416268 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 661 300 127 0 0 chrX 10006865 10006920 -12415907 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 661 276 77 0 0 chrX 10007923 10007962 -12414865 + (CAG)n Simple_repeat Simple_repeat 3 41 0 1 661 180 111 0 0 chrX 10008124 10008151 -12414676 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 661 24 32 0 0 chrX 10009412 10009443 -12413384 + AT_rich Low_complexity Low_complexity 1 31 0 1 661 32 26 0 0 chrX 10009498 10009537 -12413290 + AT_rich Low_complexity Low_complexity 1 39 0 1 661 264 143 0 0 chrX 10009883 10009939 -12412888 + (TTG)n Simple_repeat Simple_repeat 3 58 0 1 661 213 39 0 0 chrX 10011127 10011153 -12411674 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 661 23 0 0 0 chrX 10012392 10012415 -12410412 + AT_rich Low_complexity Low_complexity 1 23 0 1 661 504 253 0 54 chrX 10014335 10014519 -12408308 - XDMR_DM Unknown Unknown -186 174 1 1 661 4217 197 17 28 chrX 10014364 10015441 -12407386 + SAR_DM Satellite Satellite 175 1239 -233 1 661 870 211 40 24 chrX 10015236 10015488 -12407339 - XDMR_DM Unknown Unknown 0 360 105 1 661 457 246 0 8 chrX 10015458 10015577 -12407250 + SAR_DM Satellite Satellite 765 882 -590 1 661 289 244 12 12 chrX 10016306 10016389 -12406438 + (CAG)n Simple_repeat Simple_repeat 3 85 0 1 661 218 164 0 18 chrX 10020500 10020556 -12402271 + (TGG)n Simple_repeat Simple_repeat 2 56 0 1 661 192 125 0 0 chrX 10021084 10021116 -12401711 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 661 27 0 0 0 chrX 10021392 10021419 -12401408 + AT_rich Low_complexity Low_complexity 1 27 0 1 661 276 30 0 0 chrX 10021613 10021646 -12401181 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 1 661 204 125 0 0 chrX 10022564 10022596 -12400231 + (TCTG)n Simple_repeat Simple_repeat 3 34 0 1 661 206 121 0 0 chrX 10022901 10022934 -12399893 + (T)n Simple_repeat Simple_repeat 1 33 0 1 661 201 182 0 0 chrX 10025243 10025276 -12397551 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 661 207 114 0 0 chrX 10025884 10025919 -12396908 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 661 27 29 0 0 chrX 10026816 10026850 -12395977 + AT_rich Low_complexity Low_complexity 1 34 0 1 661 411 118 0 0 chrX 10027676 10027752 -12395075 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 661 180 0 0 0 chrX 10028660 10028680 -12394147 + (T)n Simple_repeat Simple_repeat 1 20 0 1 661 252 59 0 0 chrX 10029397 10029431 -12393396 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 661 28 0 0 0 chrX 10029897 10029925 -12392902 + AT_rich Low_complexity Low_complexity 1 28 0 1 661 195 114 0 0 chrX 10030687 10030722 -12392105 + (CACTT)n Simple_repeat Simple_repeat 5 39 0 1 661 4227 17 0 0 chrX 10032302 10032783 -12390044 + T412LTR LTR LTR 1 481 0 1 661 60822 2 0 1 chrX 10032469 10039372 -12383455 + DM412 LTR Gypsy 1 6897 0 1 661 4227 17 0 0 chrX 10039262 10039743 -12383084 + T412LTR LTR LTR 1 481 0 1 661 27 0 0 0 chrX 10039993 10040020 -12382807 + AT_rich Low_complexity Low_complexity 1 27 0 1 661 216 169 16 33 chrX 10040059 10040120 -12382707 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 661 25 0 0 0 chrX 10040182 10040207 -12382620 + AT_rich Low_complexity Low_complexity 1 25 0 1 661 285 128 0 0 chrX 10041866 10041913 -12380914 + (ATG)n Simple_repeat Simple_repeat 3 49 0 1 661 194 0 39 0 chrX 10041965 10041991 -12380836 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 661 249 203 0 17 chrX 10043103 10043163 -12379664 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 661 27 0 0 0 chrX 10043286 10043313 -12379514 + AT_rich Low_complexity Low_complexity 1 27 0 1 661 252 86 0 0 chrX 10043760 10043795 -12379032 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 661 27 0 0 0 chrX 10044823 10044850 -12377977 + AT_rich Low_complexity Low_complexity 1 27 0 1 661 246 62 0 0 chrX 10045014 10045046 -12377781 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 661 234 0 0 0 chrX 10045148 10045174 -12377653 + (A)n Simple_repeat Simple_repeat 1 26 0 1 661 267 175 0 0 chrX 10045731 10045788 -12377039 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 661 309 26 0 0 chrX 10045995 10046033 -12376794 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 661 180 0 0 0 chrX 10048524 10048544 -12374283 + (CTG)n Simple_repeat Simple_repeat 3 22 0 1 661 21 36 0 0 chrX 10049010 10049038 -12373789 + AT_rich Low_complexity Low_complexity 1 28 0 1 661 205 214 14 41 chrX 10049578 10049651 -12373176 + (TAA)n Simple_repeat Simple_repeat 2 72 0 1 661 569 217 12 18 chrX 10049909 10050078 -12372749 + SAR_DM Satellite Satellite 901 1068 -404 1 661 326 236 11 0 chrX 10050073 10050162 -12372665 - ARS406_DM Unknown Unknown -263 90 1 1 661 4190 179 13 6 chrX 10050100 10051002 -12371825 + SAR_DM Satellite Satellite 224 1132 -340 1 661 21 0 0 0 chrX 10051443 10051464 -12371363 + GC_rich Low_complexity Low_complexity 1 21 0 1 661 230 146 0 0 chrX 10051712 10051753 -12371074 - ROO_I LTR Pao -7538 718 678 1 661 186 43 0 0 chrX 10052591 10052614 -12370213 + (AACTG)n Simple_repeat Simple_repeat 4 26 0 1 661 210 139 0 0 chrX 10054324 10054360 -12368467 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 661 210 37 0 0 chrX 10055167 10055194 -12367633 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 661 24 32 0 0 chrX 10056947 10056978 -12365849 + AT_rich Low_complexity Low_complexity 1 31 0 1 661 21 0 0 0 chrX 10057121 10057142 -12365685 + AT_rich Low_complexity Low_complexity 1 21 0 1 661 239 275 14 0 chrX 10058530 10058599 -12364228 + (CTG)n Simple_repeat Simple_repeat 3 72 0 1 661 21 36 0 0 chrX 10060336 10060364 -12362463 + AT_rich Low_complexity Low_complexity 1 28 0 1 661 499 235 14 14 chrX 10060418 10060556 -12362271 - SAR_DM Satellite Satellite -760 712 575 1 661 195 69 0 0 chrX 10060635 10060664 -12362163 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 661 243 0 0 0 chrX 10062997 10063024 -12359803 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 661 207 69 0 0 chrX 10064878 10064907 -12357920 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 661 234 0 0 0 chrX 10065055 10065081 -12357746 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 661 201 94 0 0 chrX 10065739 10065771 -12357056 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 661 24 0 0 0 chrX 10065789 10065813 -12357014 + AT_rich Low_complexity Low_complexity 1 24 0 1 661 183 42 0 0 chrX 10065907 10065931 -12356896 + (G)n Simple_repeat Simple_repeat 1 24 0 1 661 244 120 40 0 chrX 10068952 10069002 -12353825 + GA-rich Low_complexity Low_complexity 2 53 0 1 661 180 158 0 0 chrX 10073692 10073730 -12349097 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 661 30 45 0 0 chrX 10074167 10074211 -12348616 + AT_rich Low_complexity Low_complexity 1 44 0 1 661 25 31 0 0 chrX 10075166 10075198 -12347629 + AT_rich Low_complexity Low_complexity 1 32 0 1 661 222 37 0 0 chrX 10075868 10075895 -12346932 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 661 300 158 0 0 chrX 10076798 10076855 -12345972 + (CAA)n Simple_repeat Simple_repeat 1 57 0 1 661 225 139 0 0 chrX 10076971 10077014 -12345813 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 661 387 132 0 0 chrX 10077061 10077129 -12345698 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 661 26 30 0 0 chrX 10077341 10077374 -12345453 + AT_rich Low_complexity Low_complexity 1 33 0 1 661 24 32 0 0 chrX 10077420 10077451 -12345376 + AT_rich Low_complexity Low_complexity 1 31 0 1 661 186 191 0 0 chrX 10079210 10079257 -12343570 + T-rich Low_complexity Low_complexity 1 47 0 1 661 218 191 28 42 chrX 10079712 10079783 -12343044 + (CTTAA)n Simple_repeat Simple_repeat 3 72 0 1 661 309 174 0 0 chrX 10080308 10080377 -12342450 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 661 195 69 0 0 chrX 10080695 10080724 -12342103 + (ATG)n Simple_repeat Simple_repeat 1 29 0 1 661 192 214 0 0 chrX 10082817 10082873 -12339954 + (CGA)n Simple_repeat Simple_repeat 3 58 0 1 661 189 208 0 0 chrX 10083015 10083087 -12339740 + (CAA)n Simple_repeat Simple_repeat 1 72 0 1 661 21 0 0 0 chrX 10083716 10083737 -12339090 + AT_rich Low_complexity Low_complexity 1 21 0 1 661 260 287 0 50 chrX 10085597 10085718 -12337109 + (CACCAT)n Simple_repeat Simple_repeat 5 119 0 1 661 210 192 0 0 chrX 10087679 10087731 -12335096 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 661 228 122 0 0 chrX 10089223 10089264 -12333563 + (A)n Simple_repeat Simple_repeat 1 41 0 1 661 195 42 0 0 chrX 10090040 10090064 -12332763 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 661 205 156 0 0 chrX 10090843 10090875 -12331952 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1 661 26 30 0 0 chrX 10091382 10091415 -12331412 + AT_rich Low_complexity Low_complexity 1 33 0 1 661 240 306 0 10 chrX 10091539 10091638 -12331189 + T-rich Low_complexity Low_complexity 2 99 0 1 662 200 111 0 27 chrX 10095646 10095683 -12327144 + (TTTCG)n Simple_repeat Simple_repeat 2 37 0 1 662 197 33 0 32 chrX 10099427 10099458 -12323369 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 1 662 207 191 0 0 chrX 10099479 10099521 -12323306 + (TATG)n Simple_repeat Simple_repeat 3 44 0 1 662 384 59 0 0 chrX 10099658 10099709 -12323118 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 662 317 93 0 18 chrX 10100127 10100182 -12322645 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 662 37 0 0 0 chrX 10100449 10100486 -12322341 + AT_rich Low_complexity Low_complexity 1 37 0 1 662 23 0 0 0 chrX 10100602 10100625 -12322202 + AT_rich Low_complexity Low_complexity 1 23 0 1 662 186 43 0 0 chrX 10101176 10101199 -12321628 + (CCG)n Simple_repeat Simple_repeat 3 25 0 1 662 216 0 0 0 chrX 10102366 10102390 -12320437 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1 662 234 81 0 0 chrX 10102429 10102466 -12320361 + (CAGAG)n Simple_repeat Simple_repeat 4 40 0 1 662 217 279 0 14 chrX 10103811 10103880 -12318947 + GA-rich Low_complexity Low_complexity 5 72 0 1 662 204 40 0 0 chrX 10106196 10106221 -12316606 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1 662 22 88 0 0 chrX 10106674 10106731 -12316096 + AT_rich Low_complexity Low_complexity 1 57 0 1 662 421 276 0 96 chrX 10109133 10109321 -12313506 + G-rich Low_complexity Low_complexity 4 173 0 1 662 228 256 0 0 chrX 10110009 10110095 -12312732 + (CCG)n Simple_repeat Simple_repeat 1 86 0 1 662 219 214 0 56 chrX 10111068 10111157 -12311670 + T-rich Low_complexity Low_complexity 3 86 0 1 662 276 137 0 0 chrX 10111248 10111299 -12311528 + (CAACC)n Simple_repeat Simple_repeat 2 52 0 1 662 198 195 0 0 chrX 10112528 10112605 -12310222 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 1 662 24 53 0 0 chrX 10114003 10114041 -12308786 + AT_rich Low_complexity Low_complexity 1 38 0 1 662 180 0 0 0 chrX 10114349 10114369 -12308458 + (CAA)n Simple_repeat Simple_repeat 1 20 0 1 662 252 0 0 0 chrX 10117229 10117257 -12305570 + (CAG)n Simple_repeat Simple_repeat 1 28 0 1 662 200 279 0 0 chrX 10118026 10118094 -12304733 + T-rich Low_complexity Low_complexity 1 68 0 1 662 215 234 0 15 chrX 10118873 10118938 -12303889 + CT-rich Low_complexity Low_complexity 2 65 0 1 662 185 65 32 0 chrX 10121061 10121092 -12301735 + (TTTC)n Simple_repeat Simple_repeat 2 33 0 1 662 226 0 0 56 chrX 10121312 10121348 -12301479 + (CCA)n Simple_repeat Simple_repeat 1 34 0 1 662 237 132 0 0 chrX 10126084 10126122 -12296705 + (CCG)n Simple_repeat Simple_repeat 2 39 0 1 662 202 196 0 38 chrX 10126969 10127022 -12295805 + A-rich Low_complexity Low_complexity 2 52 0 1 662 29 60 0 0 chrX 10128003 10128053 -12294774 + AT_rich Low_complexity Low_complexity 1 50 0 1 662 194 62 0 30 chrX 10128767 10128800 -12294027 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 662 204 67 0 0 chrX 10129216 10129246 -12293581 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 662 29 47 0 0 chrX 10129345 10129388 -12293439 + AT_rich Low_complexity Low_complexity 1 43 0 1 662 25 31 0 0 chrX 10129403 10129435 -12293392 + AT_rich Low_complexity Low_complexity 1 32 0 1 662 233 109 0 21 chrX 10129639 10129686 -12293141 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 662 222 240 0 0 chrX 10129754 10129804 -12293023 + (TAA)n Simple_repeat Simple_repeat 1 50 0 1 662 261 57 0 0 chrX 10130612 10130647 -12292180 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 662 369 0 0 0 chrX 10131019 10131060 -12291767 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 662 182 174 0 21 chrX 10131388 10131435 -12291392 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 1 662 186 43 0 0 chrX 10131450 10131473 -12291354 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 662 201 39 0 0 chrX 10132048 10132074 -12290753 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 662 216 196 0 0 chrX 10132270 10132316 -12290511 + T-rich Low_complexity Low_complexity 1 46 0 1 662 220 171 0 0 chrX 10133039 10133074 -12289753 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 662 297 109 0 0 chrX 10133189 10133235 -12289592 + (CTG)n Simple_repeat Simple_repeat 2 47 0 1 662 3311 158 7 7 chrX 10133952 10134640 -12288187 - SAR_DM Satellite Satellite -594 878 191 1 662 21 36 0 0 chrX 10135407 10135435 -12287392 + AT_rich Low_complexity Low_complexity 1 28 0 1 662 246 143 0 0 chrX 10136387 10136436 -12286391 + (T)n Simple_repeat Simple_repeat 1 49 0 1 662 201 74 0 0 chrX 10137458 10137485 -12285342 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 662 255 274 0 27 chrX 10137588 10137663 -12285164 + (CGG)n Simple_repeat Simple_repeat 3 75 0 1 662 26 0 0 0 chrX 10138007 10138033 -12284794 + AT_rich Low_complexity Low_complexity 1 26 0 1 662 22 0 0 0 chrX 10138252 10138274 -12284553 + AT_rich Low_complexity Low_complexity 1 22 0 1 662 231 36 0 0 chrX 10139396 10139424 -12283403 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 662 210 180 20 0 chrX 10139460 10139510 -12283317 + GA-rich Low_complexity Low_complexity 2 52 0 1 662 32 0 0 0 chrX 10139737 10139769 -12283058 + AT_rich Low_complexity Low_complexity 1 32 0 1 662 22 0 0 0 chrX 10139966 10139988 -12282839 + AT_rich Low_complexity Low_complexity 1 22 0 1 662 216 200 0 0 chrX 10140856 10140916 -12281911 + T-rich Low_complexity Low_complexity 1 60 0 1 662 257 279 0 0 chrX 10141192 10141271 -12281556 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 662 212 130 22 0 chrX 10141584 10141630 -12281197 + CT-rich Low_complexity Low_complexity 1 47 0 1 662 29 0 0 0 chrX 10144049 10144078 -12278749 + AT_rich Low_complexity Low_complexity 1 29 0 1 662 235 324 0 0 chrX 10144179 10144250 -12278577 + (CTCA)n Simple_repeat Simple_repeat 2 72 0 1 662 32 26 0 0 chrX 10144481 10144520 -12278307 + AT_rich Low_complexity Low_complexity 1 39 0 1 662 205 221 9 9 chrX 10145405 10145510 -12277317 + (TG)n Simple_repeat Simple_repeat 2 106 0 1 662 21 36 0 0 chrX 10147981 10148009 -12274818 + AT_rich Low_complexity Low_complexity 1 28 0 1 662 409 167 0 19 chrX 10148886 10148990 -12273837 + (CTG)n Simple_repeat Simple_repeat 3 104 0 1 662 288 164 0 0 chrX 10149071 10149138 -12273689 + (CTG)n Simple_repeat Simple_repeat 2 68 0 1 662 248 222 14 27 chrX 10149315 10149389 -12273438 + T-rich Low_complexity Low_complexity 2 74 0 1 662 233 119 0 23 chrX 10149842 10149885 -12272942 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 662 231 103 0 0 chrX 10150075 10150114 -12272713 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 662 231 154 75 30 chrX 10151417 10151484 -12271343 + (CGGAA)n Simple_repeat Simple_repeat 2 71 0 1 662 273 109 0 0 chrX 10151612 10151658 -12271169 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 662 221 217 29 14 chrX 10152522 10152592 -12270235 + (CATA)n Simple_repeat Simple_repeat 4 74 0 1 662 208 143 0 0 chrX 10152780 10152815 -12270012 + (T)n Simple_repeat Simple_repeat 1 35 0 1 662 215 214 0 0 chrX 10153632 10153674 -12269153 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 662 189 74 0 0 chrX 10154737 10154764 -12268063 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 662 219 174 0 21 chrX 10155002 10155049 -12267778 + GA-rich Low_complexity Low_complexity 3 48 0 1 662 239 104 21 0 chrX 10155376 10155424 -12267403 + (CTG)n Simple_repeat Simple_repeat 3 51 0 1 662 381 259 30 24 chrX 10155779 10155945 -12266882 - XDMR Unknown Unknown -194 167 1 1 662 4286 172 13 21 chrX 10155837 10156820 -12266007 + SAR_DM Satellite Satellite 248 1222 -250 1 662 21 36 0 0 chrX 10161299 10161327 -12261500 + AT_rich Low_complexity Low_complexity 1 28 0 1 662 3726 5 0 0 chrX 10161390 10161818 -12261009 - ROO_LTR LTR Pao 0 428 1 1 662 52678 1 2 0 chrX 10161818 10170054 -12252773 - ROO_I LTR Pao 0 8256 1 1 662 3692 9 0 0 chrX 10170054 10170482 -12252345 - ROO_LTR LTR Pao 0 428 1 1 662 37 52 0 0 chrX 10170611 10170669 -12252158 + AT_rich Low_complexity Low_complexity 1 58 0 1 662 188 111 0 27 chrX 10173644 10173681 -12249146 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 662 279 0 0 0 chrX 10174089 10174120 -12248707 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 662 22 56 0 0 chrX 10174702 10174738 -12248089 + AT_rich Low_complexity Low_complexity 1 36 0 1 662 238 218 0 35 chrX 10175505 10175562 -12247265 + (CCCA)n Simple_repeat Simple_repeat 4 58 0 1 662 225 146 0 0 chrX 10176690 10176738 -12246089 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 662 326 308 0 0 chrX 10177739 10177856 -12244971 + (CA)n Simple_repeat Simple_repeat 1 117 0 1 662 258 32 0 0 chrX 10179088 10179119 -12243708 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 662 21 0 0 0 chrX 10184442 10184463 -12238364 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 212 191 21 21 chrX 10184831 10184879 -12237948 + (CGGAA)n Simple_repeat Simple_repeat 2 49 0 1 662 267 103 0 0 chrX 10184879 10184918 -12237909 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 662 1967 201 32 22 chrX 10185854 10186453 -12236374 - SAR_DM Satellite Satellite -397 1075 471 1 662 209 213 0 0 chrX 10187327 10187374 -12235453 + A-rich Low_complexity Low_complexity 1 47 0 1 662 31 44 0 0 chrX 10188124 10188169 -12234658 + AT_rich Low_complexity Low_complexity 1 45 0 1 662 26 30 0 0 chrX 10188342 10188375 -12234452 + AT_rich Low_complexity Low_complexity 1 33 0 1 662 261 83 0 0 chrX 10188680 10188716 -12234111 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 662 22 0 0 0 chrX 10189124 10189146 -12233681 + AT_rich Low_complexity Low_complexity 1 22 0 1 662 24 0 0 0 chrX 10189862 10189886 -12232941 + AT_rich Low_complexity Low_complexity 1 24 0 1 662 459 128 0 0 chrX 10190456 10190542 -12232285 + (TG)n Simple_repeat Simple_repeat 1 86 0 1 662 344 174 0 23 chrX 10190640 10190728 -12232099 + (CAT)n Simple_repeat Simple_repeat 3 88 0 1 662 180 77 0 0 chrX 10190820 10190846 -12231981 + (T)n Simple_repeat Simple_repeat 1 26 0 1 662 30 27 0 0 chrX 10192044 10192081 -12230746 + AT_rich Low_complexity Low_complexity 1 37 0 1 662 180 0 0 0 chrX 10193917 10193937 -12228890 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 662 21 0 0 0 chrX 10194431 10194452 -12228375 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 454 271 73 23 chrX 10196233 10196452 -12226375 - XDMR Unknown Unknown -131 230 1 1 662 3518 185 11 21 chrX 10196285 10197184 -12225643 + SAR_DM Satellite Satellite 198 1087 -385 1 662 24 53 0 0 chrX 10197775 10197813 -12225014 + AT_rich Low_complexity Low_complexity 1 38 0 1 662 22 70 0 0 chrX 10198608 10198651 -12224176 + AT_rich Low_complexity Low_complexity 1 43 0 1 662 217 250 0 0 chrX 10198814 10198870 -12223957 + A-rich Low_complexity Low_complexity 1 56 0 1 662 213 108 0 0 chrX 10201198 10201235 -12221592 + (A)n Simple_repeat Simple_repeat 1 37 0 1 662 21 71 0 0 chrX 10201717 10201759 -12221068 + AT_rich Low_complexity Low_complexity 1 42 0 1 662 228 111 0 0 chrX 10202256 10202292 -12220535 + (CTG)n Simple_repeat Simple_repeat 3 38 0 1 662 219 214 0 77 chrX 10202780 10202871 -12219956 + T-rich Low_complexity Low_complexity 3 86 0 1 662 198 118 0 0 chrX 10204650 10204684 -12218143 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 662 240 35 0 0 chrX 10205331 10205360 -12217467 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 662 225 163 0 0 chrX 10206430 10206479 -12216348 + A-rich Low_complexity Low_complexity 1 49 0 1 662 213 39 0 0 chrX 10207316 10207342 -12215485 + (AACTG)n Simple_repeat Simple_repeat 3 28 0 1 662 180 0 0 0 chrX 10207342 10207361 -12215466 + (CGAAA)n Simple_repeat Simple_repeat 1 20 0 1 662 207 0 0 0 chrX 10207500 10207523 -12215304 + (A)n Simple_repeat Simple_repeat 1 23 0 1 662 25 51 0 0 chrX 10208179 10208218 -12214609 + AT_rich Low_complexity Low_complexity 1 39 0 1 662 202 181 27 40 chrX 10209203 10209278 -12213549 + (TTTG)n Simple_repeat Simple_repeat 2 75 0 1 662 21 0 0 0 chrX 10209513 10209534 -12213293 + AT_rich Low_complexity Low_complexity 1 21 0 1 662 22 0 0 0 chrX 10209810 10209832 -12212995 + AT_rich Low_complexity Low_complexity 1 22 0 1 662 25 31 0 0 chrX 10209864 10209896 -12212931 + AT_rich Low_complexity Low_complexity 1 32 0 1 662 378 0 0 0 chrX 10210268 10210310 -12212517 + (T)n Simple_repeat Simple_repeat 1 42 0 1 662 306 258 0 11 chrX 10210955 10211049 -12211778 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 662 237 159 0 0 chrX 10211215 10211259 -12211568 + T-rich Low_complexity Low_complexity 1 44 0 1 662 204 97 0 0 chrX 10212020 10212051 -12210776 + (CAA)n Simple_repeat Simple_repeat 1 31 0 1 662 270 56 0 0 chrX 10212752 10212788 -12210039 + (CAG)n Simple_repeat Simple_repeat 2 37 0 1 662 209 211 0 0 chrX 10216423 10216461 -12206366 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 1 662 225 65 0 0 chrX 10216530 10216561 -12206266 + (CAGT)n Simple_repeat Simple_repeat 2 32 0 1 662 231 216 20 0 chrX 10218525 10218576 -12204251 + CT-rich Low_complexity Low_complexity 2 53 0 1 662 204 40 0 0 chrX 10218770 10218795 -12204032 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 662 774 141 138 23 chrX 10220228 10220402 -12202425 - DNAREP1_DM LINE Penelope 0 594 401 1 663 197 98 0 24 chrX 10224073 10224115 -12198712 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1 663 237 211 0 0 chrX 10226699 10226756 -12196071 + T-rich Low_complexity Low_complexity 5 61 0 1 663 225 196 0 0 chrX 10227853 10227899 -12194928 + T-rich Low_complexity Low_complexity 1 46 0 1 663 180 0 0 0 chrX 10229731 10229751 -12193076 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 663 318 171 0 0 chrX 10230139 10230209 -12192618 + (CCA)n Simple_repeat Simple_repeat 3 72 0 1 663 25 0 0 0 chrX 10230505 10230530 -12192297 + AT_rich Low_complexity Low_complexity 1 25 0 1 663 21 57 0 0 chrX 10230583 10230618 -12192209 + AT_rich Low_complexity Low_complexity 1 35 0 1 663 24 67 0 0 chrX 10231671 10231716 -12191111 + AT_rich Low_complexity Low_complexity 1 45 0 1 663 195 69 0 0 chrX 10231950 10231979 -12190848 + (A)n Simple_repeat Simple_repeat 1 29 0 1 663 207 0 0 0 chrX 10232597 10232620 -12190207 + (A)n Simple_repeat Simple_repeat 1 23 0 1 663 282 167 0 0 chrX 10232866 10232926 -12189901 + A-rich Low_complexity Low_complexity 1 60 0 1 663 4337 188 22 11 chrX 10233970 10234965 -12187862 - SAR_DM Satellite Satellite -241 1231 226 1 663 477 184 55 31 chrX 10234835 10234998 -12187829 + XDMR Unknown Unknown 1 167 -194 1 663 201 133 0 0 chrX 10238371 10238401 -12184426 + (CATA)n Simple_repeat Simple_repeat 4 33 0 1 663 21 36 0 0 chrX 10238887 10238915 -12183912 + AT_rich Low_complexity Low_complexity 1 28 0 1 663 189 0 0 0 chrX 10239070 10239091 -12183736 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 663 240 172 0 0 chrX 10239119 10239177 -12183650 + GA-rich Low_complexity Low_complexity 2 59 0 1 663 21 0 0 0 chrX 10239939 10239960 -12182867 + AT_rich Low_complexity Low_complexity 1 21 0 1 663 24 0 0 0 chrX 10240222 10240246 -12182581 + AT_rich Low_complexity Low_complexity 1 24 0 1 663 233 128 0 21 chrX 10241383 10241431 -12181396 + (CAG)n Simple_repeat Simple_repeat 2 48 0 1 663 21 36 0 0 chrX 10241794 10241822 -12181005 + AT_rich Low_complexity Low_complexity 1 28 0 1 663 180 77 0 0 chrX 10242606 10242632 -12180195 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 1 663 2214 112 62 55 chrX 10242886 10243290 -12179537 + Gypsy6_LTR LTR Gypsy 1 407 0 1 663 18530 231 18 26 chrX 10243306 10249988 -12172839 + Gypsy6_I LTR Gypsy 27 7012 0 1 663 2224 110 57 62 chrX 10249990 10250396 -12172431 + Gypsy6_LTR LTR Gypsy 1 404 -3 1 663 201 39 0 0 chrX 10250694 10250720 -12172107 + (CGAAA)n Simple_repeat Simple_repeat 3 28 0 1 663 334 165 10 10 chrX 10250974 10251078 -12171749 + (TG)n Simple_repeat Simple_repeat 1 104 0 1 663 247 250 0 32 chrX 10256606 10256668 -12166159 + (TATG)n Simple_repeat Simple_repeat 4 63 0 1 663 216 188 0 0 chrX 10257510 10257558 -12165269 + T-rich Low_complexity Low_complexity 1 48 0 1 663 204 135 0 0 chrX 10259538 10259575 -12163252 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 663 234 231 0 0 chrX 10259969 10260060 -12162767 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 663 225 108 0 0 chrX 10267844 10267881 -12154946 + (TTCTCC)n Simple_repeat Simple_repeat 1 37 0 1 663 235 211 0 66 chrX 10276958 10277034 -12145793 + A-rich Low_complexity Low_complexity 6 76 0 1 663 216 111 0 0 chrX 10277309 10277345 -12145482 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 663 198 143 0 0 chrX 10280416 10280451 -12142376 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 663 195 129 0 0 chrX 10280815 10280846 -12141981 + (CCG)n Simple_repeat Simple_repeat 3 33 0 1 663 183 186 0 0 chrX 10280909 10280952 -12141875 + (CAA)n Simple_repeat Simple_repeat 2 44 0 1 663 264 149 0 0 chrX 10282411 10282458 -12140369 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 663 246 191 0 31 chrX 10283078 10283143 -12139684 + (CAATC)n Simple_repeat Simple_repeat 5 67 0 1 663 315 104 0 0 chrX 10284862 10284910 -12137917 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 663 252 0 0 0 chrX 10286699 10286727 -12136100 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 663 486 266 36 22 chrX 10288956 10289179 -12133648 - XDMR Unknown Unknown -135 226 1 1 663 1890 253 51 44 chrX 10289019 10290664 -12132163 + SAR_DM Satellite Satellite 1 1656 -243 1 663 327 229 64 0 chrX 10290692 10290801 -12132026 + SAR_DM Satellite Satellite 603 718 -754 1 663 207 69 0 0 chrX 10291377 10291406 -12131421 + (CGAAT)n Simple_repeat Simple_repeat 3 31 0 1 663 188 200 18 0 chrX 10291526 10291581 -12131246 + (TTG)n Simple_repeat Simple_repeat 3 58 0 1 663 249 33 0 0 chrX 10293735 10293765 -12129062 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1 663 180 0 0 0 chrX 10293855 10293875 -12128952 + (GTTTG)n Simple_repeat Simple_repeat 5 24 0 1 663 27 0 0 0 chrX 10294468 10294495 -12128332 + AT_rich Low_complexity Low_complexity 1 27 0 1 663 207 114 0 0 chrX 10298064 10298099 -12124728 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 1 663 252 130 0 0 chrX 10301793 10301839 -12120988 + (CAG)n Simple_repeat Simple_repeat 3 48 0 1 663 219 36 0 0 chrX 10302094 10302122 -12120705 + (A)n Simple_repeat Simple_repeat 1 28 0 1 663 27 73 0 0 chrX 10302307 10302362 -12120465 + AT_rich Low_complexity Low_complexity 1 55 0 1 663 23 54 0 0 chrX 10302426 10302463 -12120364 + AT_rich Low_complexity Low_complexity 1 37 0 1 663 254 125 21 0 chrX 10303557 10303605 -12119222 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 663 189 74 0 0 chrX 10303664 10303691 -12119136 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 663 33 25 0 0 chrX 10303807 10303847 -12118980 + AT_rich Low_complexity Low_complexity 1 40 0 1 663 228 35 0 0 chrX 10304928 10304957 -12117870 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 663 21 0 0 0 chrX 10308134 10308155 -12114672 + AT_rich Low_complexity Low_complexity 1 21 0 1 663 1052 257 55 21 chrX 10310793 10311270 -12111557 - SAR_DM Satellite Satellite -405 1067 575 1 663 549 252 19 14 chrX 10311130 10311343 -12111484 + XDMR Unknown Unknown 1 214 -147 1 663 22 35 0 0 chrX 10312201 10312230 -12110597 + AT_rich Low_complexity Low_complexity 1 29 0 1 663 25 31 0 0 chrX 10312412 10312444 -12110383 + AT_rich Low_complexity Low_complexity 1 32 0 1 663 35 24 0 0 chrX 10312565 10312607 -12110220 + AT_rich Low_complexity Low_complexity 1 42 0 1 663 183 42 0 0 chrX 10313790 10313814 -12109013 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 663 333 62 0 0 chrX 10314293 10314341 -12108486 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 663 264 149 0 0 chrX 10316425 10316472 -12106355 + (CAATC)n Simple_repeat Simple_repeat 5 51 0 1 663 192 135 0 0 chrX 10317420 10317457 -12105370 + (CAG)n Simple_repeat Simple_repeat 3 39 0 1 663 199 26 24 73 chrX 10318147 10318188 -12104639 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 663 192 97 0 0 chrX 10318227 10318258 -12104569 + (ATTCG)n Simple_repeat Simple_repeat 5 35 0 1 663 24 0 0 0 chrX 10319098 10319122 -12103705 + AT_rich Low_complexity Low_complexity 1 24 0 1 663 180 0 0 0 chrX 10323644 10323664 -12099163 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 663 29 47 0 0 chrX 10325433 10325476 -12097351 + AT_rich Low_complexity Low_complexity 1 43 0 1 663 217 216 0 0 chrX 10326917 10326968 -12095859 + (CAG)n Simple_repeat Simple_repeat 1 51 0 1 663 208 184 20 0 chrX 10327080 10327129 -12095698 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 663 186 103 0 0 chrX 10327164 10327193 -12095634 + (CATTT)n Simple_repeat Simple_repeat 3 31 0 1 663 182 156 0 22 chrX 10327273 10327319 -12095508 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 1 663 219 36 0 0 chrX 10327360 10327388 -12095439 + (T)n Simple_repeat Simple_repeat 1 28 0 1 663 255 114 0 0 chrX 10328458 10328502 -12094325 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 663 240 35 0 0 chrX 10328611 10328640 -12094187 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 663 208 231 0 0 chrX 10329555 10329607 -12093220 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 663 206 62 31 0 chrX 10331042 10331074 -12091753 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 663 180 0 0 0 chrX 10331438 10331458 -12091369 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 663 1157 69 6 25 chrX 10333112 10333275 -12089552 - XDMR Unknown Unknown -201 160 1 1 663 1499 56 0 0 chrX 10333275 10333473 -12089354 - XDMR Unknown Unknown 0 361 164 1 663 312 70 0 0 chrX 10334767 10334810 -12088017 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 663 201 39 0 0 chrX 10335261 10335287 -12087540 + (A)n Simple_repeat Simple_repeat 1 26 0 1 663 203 200 0 0 chrX 10335945 10335980 -12086847 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 663 309 100 0 0 chrX 10336125 10336175 -12086652 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 663 27 81 0 0 chrX 10337671 10337733 -12085094 + AT_rich Low_complexity Low_complexity 1 62 0 1 663 21 57 0 0 chrX 10338915 10338950 -12083877 + AT_rich Low_complexity Low_complexity 1 35 0 1 663 599 60 229 48 chrX 10339625 10339730 -12083097 + DNAREP1_DM LINE Penelope 1 124 -470 1 663 1043 127 62 53 chrX 10339724 10339949 -12082878 + DNAREP1_DM LINE Penelope 368 594 0 1 663 212 154 0 19 chrX 10341156 10341209 -12081618 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 663 21 0 0 0 chrX 10341339 10341360 -12081467 + AT_rich Low_complexity Low_complexity 1 21 0 1 663 28 29 0 0 chrX 10341827 10341862 -12080965 + AT_rich Low_complexity Low_complexity 1 35 0 1 663 25 0 0 0 chrX 10344642 10344667 -12078160 + AT_rich Low_complexity Low_complexity 1 25 0 1 663 195 42 0 0 chrX 10345891 10345915 -12076912 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 663 287 276 20 33 chrX 10348177 10348327 -12074500 + A-rich Low_complexity Low_complexity 3 150 0 1 663 186 191 0 0 chrX 10351573 10351615 -12071212 + A-rich Low_complexity Low_complexity 1 42 0 1 663 22 35 0 0 chrX 10352057 10352086 -12070741 + AT_rich Low_complexity Low_complexity 1 29 0 1 663 23 0 0 0 chrX 10352297 10352320 -12070507 + AT_rich Low_complexity Low_complexity 1 23 0 1 663 39 22 0 0 chrX 10353314 10353360 -12069467 + AT_rich Low_complexity Low_complexity 1 46 0 1 663 26 0 0 0 chrX 10354010 10354036 -12068791 + AT_rich Low_complexity Low_complexity 1 26 0 1 663 36 40 0 0 chrX 10354567 10354617 -12068210 + AT_rich Low_complexity Low_complexity 1 50 0 1 664 23 33 0 0 chrX 10355913 10355943 -12066884 + AT_rich Low_complexity Low_complexity 1 30 0 1 664 344 123 0 14 chrX 10356913 10356987 -12065840 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 664 195 225 0 0 chrX 10357543 10357614 -12065213 + CT-rich Low_complexity Low_complexity 2 72 0 1 664 258 176 0 0 chrX 10357913 10357964 -12064863 + (TATG)n Simple_repeat Simple_repeat 4 54 0 1 664 241 125 0 0 chrX 10358759 10358807 -12064020 - ROO_I LTR Pao -7530 726 679 1 664 341 314 7 7 chrX 10358851 10358989 -12063838 + (CCG)n Simple_repeat Simple_repeat 2 139 0 1 664 264 130 0 0 chrX 10359030 10359076 -12063751 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 664 204 125 0 0 chrX 10360386 10360418 -12062409 + (CCG)n Simple_repeat Simple_repeat 3 34 0 1 664 287 171 0 64 chrX 10360624 10360718 -12062109 - ROO_I LTR Pao -7528 728 641 1 664 243 184 0 106 chrX 10360681 10360766 -12062061 - TART_B1 LINE telomeric -10457 197 122 1 664 253 162 14 14 chrX 10360940 10361009 -12061818 + (CTG)n Simple_repeat Simple_repeat 1 69 0 1 664 193 218 13 13 chrX 10361162 10361241 -12061586 + (CTG)n Simple_repeat Simple_repeat 3 81 0 1 664 293 145 0 0 chrX 10361340 10361402 -12061425 - ROO_I LTR Pao -7536 720 659 1 664 200 189 0 0 chrX 10363321 10363358 -12059469 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 664 228 86 0 0 chrX 10363866 10363901 -12058926 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 664 231 161 0 0 chrX 10364838 10364894 -12057933 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 664 246 153 0 63 chrX 10365267 10365330 -12057497 - ROO_I LTR Pao -7494 762 704 1 664 225 191 31 16 chrX 10367133 10367197 -12055630 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 664 213 213 0 0 chrX 10372135 10372182 -12050645 + (CCA)n Simple_repeat Simple_repeat 3 49 0 1 664 217 167 21 0 chrX 10372953 10373001 -12049826 + A-rich Low_complexity Low_complexity 6 54 0 1 664 30 0 0 0 chrX 10377923 10377953 -12044874 + AT_rich Low_complexity Low_complexity 1 30 0 1 664 32 0 0 0 chrX 10378498 10378530 -12044297 + AT_rich Low_complexity Low_complexity 1 32 0 1 664 225 0 0 0 chrX 10379170 10379195 -12043632 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 664 34 0 0 0 chrX 10379433 10379467 -12043360 + AT_rich Low_complexity Low_complexity 1 34 0 1 664 264 122 0 0 chrX 10380442 10380483 -12042344 + (GTGTG)n Simple_repeat Simple_repeat 5 45 0 1 664 891 290 63 31 chrX 10382718 10382865 -12039962 - SAR_DM Satellite Satellite -620 852 508 1 664 2306 91 3 0 chrX 10382865 10383196 -12039631 + XDMR Unknown Unknown 30 361 0 1 664 1301 77 6 0 chrX 10383196 10383377 -12039450 + XDMR Unknown Unknown 1 182 -179 1 664 891 290 63 31 chrX 10383196 10383305 -12039522 - SAR_DM Satellite Satellite -620 507 247 1 664 26 30 0 0 chrX 10384728 10384761 -12038066 + AT_rich Low_complexity Low_complexity 1 33 0 1 664 21 71 0 0 chrX 10385365 10385407 -12037420 + AT_rich Low_complexity Low_complexity 1 42 0 1 664 357 62 0 0 chrX 10390562 10390610 -12032217 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1 664 34 24 0 0 chrX 10395539 10395580 -12027247 + AT_rich Low_complexity Low_complexity 1 41 0 1 664 198 0 0 0 chrX 10397119 10397141 -12025686 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 664 26 0 0 0 chrX 10398479 10398505 -12024322 + AT_rich Low_complexity Low_complexity 1 26 0 1 664 26 0 0 0 chrX 10400196 10400222 -12022605 + AT_rich Low_complexity Low_complexity 1 26 0 1 664 234 62 0 0 chrX 10400429 10400461 -12022366 + (GACTG)n Simple_repeat Simple_repeat 3 34 0 1 664 219 114 0 0 chrX 10400967 10401002 -12021825 + (CAG)n Simple_repeat Simple_repeat 3 37 0 1 664 21 36 0 0 chrX 10401379 10401407 -12021420 + AT_rich Low_complexity Low_complexity 1 28 0 1 664 21 36 0 0 chrX 10403553 10403581 -12019246 + AT_rich Low_complexity Low_complexity 1 28 0 1 664 22 0 0 0 chrX 10404642 10404664 -12018163 + AT_rich Low_complexity Low_complexity 1 22 0 1 664 365 75 0 0 chrX 10404804 10404857 -12017970 - XDMR Unknown Unknown -301 60 8 1 664 28 29 0 0 chrX 10404868 10404903 -12017924 + AT_rich Low_complexity Low_complexity 1 35 0 1 664 189 74 0 0 chrX 10408640 10408667 -12014160 + (TAAAAA)n Simple_repeat Simple_repeat 4 30 0 1 664 183 184 0 0 chrX 10409956 10409994 -12012833 + (TATG)n Simple_repeat Simple_repeat 4 41 0 1 664 225 94 0 0 chrX 10412871 10412903 -12009924 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 664 194 62 31 0 chrX 10414356 10414388 -12008439 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 1 664 276 111 0 0 chrX 10414629 10414674 -12008153 + (TTGG)n Simple_repeat Simple_repeat 4 48 0 1 664 198 0 0 0 chrX 10415587 10415609 -12007218 + (GATTG)n Simple_repeat Simple_repeat 2 23 0 1 664 36 0 0 0 chrX 10416754 10416790 -12006037 + AT_rich Low_complexity Low_complexity 1 36 0 1 664 219 246 16 0 chrX 10418671 10418732 -12004095 + A-rich Low_complexity Low_complexity 1 62 0 1 664 282 125 0 0 chrX 10418858 10418906 -12003921 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1 664 261 0 0 0 chrX 10419130 10419159 -12003668 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 664 3360 5 7 7 chrX 10419159 10419572 -12003255 + DM297_LTR LTR Gypsy 2 414 0 1 664 51103 7 0 0 chrX 10419572 10425740 -11997087 + DM297_I LTR Gypsy 1 6167 0 1 664 3368 5 7 7 chrX 10425740 10426154 -11996673 + DM297_LTR LTR Gypsy 1 414 0 1 664 204 143 0 23 chrX 10426274 10426317 -11996510 + T-rich Low_complexity Low_complexity 1 42 0 1 664 273 57 0 0 chrX 10426582 10426617 -11996210 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 664 25 0 0 0 chrX 10427834 10427859 -11994968 + AT_rich Low_complexity Low_complexity 1 25 0 1 664 208 250 0 14 chrX 10428827 10428896 -11993931 + A-rich Low_complexity Low_complexity 2 69 0 1 664 201 74 0 0 chrX 10430366 10430393 -11992434 + (CAA)n Simple_repeat Simple_repeat 3 29 0 1 664 204 125 20 40 chrX 10431915 10431965 -11990862 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 664 24 32 0 0 chrX 10432146 10432177 -11990650 + AT_rich Low_complexity Low_complexity 1 31 0 1 664 201 171 0 0 chrX 10440490 10440525 -11982302 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 664 240 86 0 0 chrX 10444107 10444142 -11978685 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 664 8493 1 0 0 chrX 10444943 10445847 -11976980 + HOBO DNA hAT 1 904 -2112 1 664 4650 2 2 10 chrX 10445839 10446349 -11976478 + HOBO DNA hAT 2511 3016 0 1 664 27 49 0 0 chrX 10446752 10446793 -11976034 + AT_rich Low_complexity Low_complexity 1 41 0 1 664 749 299 14 25 chrX 10446855 10447219 -11975608 + SAR_DM Satellite Satellite 516 875 -597 1 664 186 103 0 0 chrX 10448099 10448128 -11974699 + (CACTT)n Simple_repeat Simple_repeat 1 29 0 1 664 207 0 0 0 chrX 10448515 10448538 -11974289 + (A)n Simple_repeat Simple_repeat 1 23 0 1 664 207 111 28 0 chrX 10449616 10449652 -11973175 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 664 213 94 0 0 chrX 10450237 10450269 -11972558 + (T)n Simple_repeat Simple_repeat 1 32 0 1 664 202 274 0 0 chrX 10450477 10450550 -11972277 + T-rich Low_complexity Low_complexity 1 73 0 1 664 28 0 0 0 chrX 10450982 10451010 -11971817 + AT_rich Low_complexity Low_complexity 1 28 0 1 664 27 49 0 0 chrX 10451726 10451767 -11971060 + AT_rich Low_complexity Low_complexity 1 41 0 1 664 22 0 0 0 chrX 10452516 10452538 -11970289 + AT_rich Low_complexity Low_complexity 1 22 0 1 664 23 54 0 0 chrX 10453687 10453724 -11969103 + AT_rich Low_complexity Low_complexity 1 37 0 1 664 34 24 0 0 chrX 10454405 10454446 -11968381 + AT_rich Low_complexity Low_complexity 1 41 0 1 664 22 0 0 0 chrX 10454591 10454613 -11968214 + AT_rich Low_complexity Low_complexity 1 22 0 1 664 183 42 0 0 chrX 10455353 10455377 -11967450 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 664 29 0 0 0 chrX 10456327 10456356 -11966471 + AT_rich Low_complexity Low_complexity 1 29 0 1 664 216 0 0 0 chrX 10461499 10461523 -11961304 + (T)n Simple_repeat Simple_repeat 1 24 0 1 664 216 0 0 0 chrX 10462286 10462310 -11960517 + (A)n Simple_repeat Simple_repeat 1 24 0 1 664 216 0 0 0 chrX 10462496 10462520 -11960307 + (A)n Simple_repeat Simple_repeat 1 24 0 1 664 233 278 10 20 chrX 10464121 10464220 -11958607 + (CTG)n Simple_repeat Simple_repeat 1 98 0 1 664 186 103 0 0 chrX 10466361 10466390 -11956437 + (T)n Simple_repeat Simple_repeat 1 29 0 1 664 33 43 0 0 chrX 10467055 10467102 -11955725 + AT_rich Low_complexity Low_complexity 1 47 0 1 664 207 139 0 0 chrX 10467462 10467498 -11955329 + (ATG)n Simple_repeat Simple_repeat 1 36 0 1 664 34 55 0 0 chrX 10467661 10467716 -11955111 + AT_rich Low_complexity Low_complexity 1 55 0 1 664 204 143 0 0 chrX 10468113 10468155 -11954672 + (CCAA)n Simple_repeat Simple_repeat 1 42 0 1 664 399 202 0 0 chrX 10469877 10469971 -11952856 + (TTA)n Simple_repeat Simple_repeat 1 94 0 1 664 250 198 0 58 chrX 10470034 10470120 -11952707 - ROO_I LTR Pao -7524 732 652 1 664 244 302 0 0 chrX 10471259 10471365 -11951462 + T-rich Low_complexity Low_complexity 1 106 0 1 664 216 143 0 0 chrX 10471853 10471895 -11950932 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 664 270 148 0 0 chrX 10471983 10472037 -11950790 + (A)n Simple_repeat Simple_repeat 1 54 0 1 664 221 306 0 0 chrX 10473211 10473283 -11949544 + A-rich Low_complexity Low_complexity 2 73 0 1 664 21 0 0 0 chrX 10473413 10473434 -11949393 + AT_rich Low_complexity Low_complexity 1 21 0 1 664 411 0 51 0 chrX 10473544 10473603 -11949224 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 664 201 0 100 25 chrX 10474787 10474827 -11948000 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 1 664 252 0 0 0 chrX 10475577 10475605 -11947222 + (A)n Simple_repeat Simple_repeat 1 28 0 1 664 202 220 0 0 chrX 10477011 10477061 -11945766 + T-rich Low_complexity Low_complexity 1 50 0 1 664 205 270 0 0 chrX 10479160 10479223 -11943604 + A-rich Low_complexity Low_complexity 1 63 0 1 664 189 132 0 0 chrX 10479391 10479429 -11943398 + (ACCG)n Simple_repeat Simple_repeat 1 38 0 1 664 191 36 0 35 chrX 10479444 10479473 -11943354 + (AACTG)n Simple_repeat Simple_repeat 4 31 0 1 664 210 288 0 17 chrX 10479499 10479559 -11943268 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 664 34 84 0 0 chrX 10481249 10481332 -11941495 + AT_rich Low_complexity Low_complexity 1 83 0 1 664 877 282 31 37 chrX 10484014 10484471 -11938356 - SAR_DM Satellite Satellite -464 1008 555 1 664 496 250 144 22 chrX 10484312 10484541 -11938286 + XDMR Unknown Unknown 1 257 -104 1 665 21 0 0 0 chrX 10492298 10492319 -11930508 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 34 24 0 0 chrX 10495917 10495958 -11926869 + AT_rich Low_complexity Low_complexity 1 41 0 1 665 25 0 0 0 chrX 10496944 10496969 -11925858 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 22 35 0 0 chrX 10497040 10497069 -11925758 + AT_rich Low_complexity Low_complexity 1 29 0 1 665 29 0 0 0 chrX 10497615 10497644 -11925183 + AT_rich Low_complexity Low_complexity 1 29 0 1 665 21 57 0 0 chrX 10497888 10497923 -11924904 + AT_rich Low_complexity Low_complexity 1 35 0 1 665 244 233 0 32 chrX 10499067 10499129 -11923698 + (CCG)n Simple_repeat Simple_repeat 2 61 0 1 665 240 245 0 0 chrX 10499614 10499667 -11923160 + (CCG)n Simple_repeat Simple_repeat 3 55 0 1 665 210 274 0 0 chrX 10500047 10500109 -11922718 + (CCG)n Simple_repeat Simple_repeat 2 63 0 1 665 212 306 0 12 chrX 10500745 10500831 -11921996 + (CCG)n Simple_repeat Simple_repeat 3 87 0 1 665 230 329 0 0 chrX 10501104 10501189 -11921638 + (CCG)n Simple_repeat Simple_repeat 1 85 0 1 665 231 267 35 0 chrX 10501317 10501403 -11921424 + (CGTG)n Simple_repeat Simple_repeat 3 91 0 1 665 183 205 0 0 chrX 10501423 10501462 -11921365 + (CCG)n Simple_repeat Simple_repeat 1 39 0 1 665 354 80 0 0 chrX 10501735 10501785 -11921042 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 665 216 189 0 0 chrX 10501831 10501905 -11920922 + (CTG)n Simple_repeat Simple_repeat 1 74 0 1 665 327 202 0 28 chrX 10501913 10502020 -11920807 - ROO_I LTR Pao -7513 743 640 1 665 23 33 0 0 chrX 10503248 10503278 -11919549 + AT_rich Low_complexity Low_complexity 1 30 0 1 665 36 53 0 0 chrX 10503855 10503912 -11918915 + AT_rich Low_complexity Low_complexity 1 57 0 1 665 264 158 0 0 chrX 10505911 10505968 -11916859 + (CTG)n Simple_repeat Simple_repeat 2 58 0 1 665 22 0 0 0 chrX 10507177 10507199 -11915628 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 213 173 0 37 chrX 10508067 10508121 -11914706 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 665 210 118 0 0 chrX 10508887 10508921 -11913906 + (GGA)n Simple_repeat Simple_repeat 3 36 0 1 665 192 40 0 0 chrX 10509586 10509611 -11913216 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 665 273 29 0 0 chrX 10510200 10510234 -11912593 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 665 253 167 14 27 chrX 10511081 10511155 -11911672 + (CTG)n Simple_repeat Simple_repeat 3 75 0 1 665 246 105 0 0 chrX 10511453 10511491 -11911336 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1 665 227 192 0 0 chrX 10511583 10511635 -11911192 + CT-rich Low_complexity Low_complexity 2 53 0 1 665 201 167 0 0 chrX 10511770 10511824 -11911003 + CT-rich Low_complexity Low_complexity 2 55 0 1 665 264 227 0 102 chrX 10511901 10512009 -11910818 - ROO_I LTR Pao -7518 738 642 1 665 285 140 0 0 chrX 10512050 10512107 -11910720 + (TCC)n Simple_repeat Simple_repeat 1 57 0 1 665 228 67 0 0 chrX 10512182 10512212 -11910615 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 665 221 183 0 16 chrX 10512261 10512322 -11910505 + (CTG)n Simple_repeat Simple_repeat 3 62 0 1 665 342 175 41 66 chrX 10512458 10512580 -11910247 - ROO_I LTR Pao -7499 757 639 1 665 239 232 0 34 chrX 10512614 10512703 -11910124 - ROO_I LTR Pao -7528 728 643 1 665 232 163 0 125 chrX 10512774 10512886 -11909941 - ROO_I LTR Pao -7518 738 641 1 665 228 143 0 0 chrX 10512939 10512981 -11909846 + (TTG)n Simple_repeat Simple_repeat 1 42 0 1 665 21 36 0 0 chrX 10513271 10513299 -11909528 + AT_rich Low_complexity Low_complexity 1 28 0 1 665 221 178 22 0 chrX 10513794 10513839 -11908988 + GA-rich Low_complexity Low_complexity 2 47 0 1 665 310 264 0 0 chrX 10514439 10514530 -11908297 + CT-rich Low_complexity Low_complexity 1 91 0 1 665 312 102 0 0 chrX 10515312 10515361 -11907466 + (CAG)n Simple_repeat Simple_repeat 1 49 0 1 665 415 291 28 16 chrX 10515925 10516107 -11906720 - XDMR Unknown Unknown -177 184 1 1 665 701 289 59 35 chrX 10515968 10516391 -11906436 + SAR_DM Satellite Satellite 576 1008 -464 1 665 830 301 59 9 chrX 10517379 10517903 -11904924 + SAR_DM Satellite Satellite 507 1056 -416 1 665 21 0 0 0 chrX 10521250 10521271 -11901556 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 205 264 0 0 chrX 10523461 10523514 -11899313 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 665 195 204 0 0 chrX 10524374 10524428 -11898399 + (CCA)n Simple_repeat Simple_repeat 1 54 0 1 665 21 36 0 0 chrX 10524705 10524733 -11898094 + AT_rich Low_complexity Low_complexity 1 28 0 1 665 180 200 0 0 chrX 10524885 10524945 -11897882 + CT-rich Low_complexity Low_complexity 2 61 0 1 665 219 36 0 0 chrX 10525626 10525654 -11897173 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 665 189 0 0 0 chrX 10526501 10526522 -11896305 + (CAGCT)n Simple_repeat Simple_repeat 5 25 0 1 665 246 250 15 0 chrX 10528728 10528796 -11894031 + (TTG)n Simple_repeat Simple_repeat 2 70 0 1 665 252 86 0 0 chrX 10530371 10530406 -11892421 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 665 22 35 0 0 chrX 10532499 10532528 -11890299 + AT_rich Low_complexity Low_complexity 1 29 0 1 665 28 0 0 0 chrX 10533319 10533347 -11889480 + AT_rich Low_complexity Low_complexity 1 28 0 1 665 260 294 0 0 chrX 10533730 10533822 -11889005 + (TCTCTG)n Simple_repeat Simple_repeat 2 93 0 1 665 849 258 68 40 chrX 10539239 10539598 -11883229 - SAR_DM Satellite Satellite -242 369 1 1 665 201 195 0 0 chrX 10539848 10539889 -11882938 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 665 207 69 0 0 chrX 10543104 10543133 -11879694 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 665 214 297 25 33 chrX 10543266 10543388 -11879439 + (TATATG)n Simple_repeat Simple_repeat 2 122 0 1 665 21 0 0 0 chrX 10543748 10543769 -11879058 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 243 250 0 0 chrX 10549236 10549288 -11873539 + CT-rich Low_complexity Low_complexity 2 53 0 1 665 192 77 0 0 chrX 10550290 10550316 -11872511 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 665 267 133 0 0 chrX 10550945 10550990 -11871837 + (TATG)n Simple_repeat Simple_repeat 1 45 0 1 665 402 163 0 0 chrX 10551036 10551134 -11871693 + (CA)n Simple_repeat Simple_repeat 1 98 0 1 665 953 267 97 47 chrX 10555979 10556513 -11866314 + SAR_DM Satellite Satellite 507 1067 -405 1 665 247 214 18 0 chrX 10557471 10557527 -11865300 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 1 665 215 148 0 36 chrX 10557817 10557873 -11864954 + CT-rich Low_complexity Low_complexity 4 57 0 1 665 287 248 10 0 chrX 10558921 10559022 -11863805 + (ATGGTG)n Simple_repeat Simple_repeat 3 104 0 1 665 183 42 0 0 chrX 10559335 10559359 -11863468 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 665 21 0 0 0 chrX 10559662 10559683 -11863144 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 225 0 0 0 chrX 10560935 10560960 -11861867 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 665 213 94 0 0 chrX 10561517 10561549 -11861278 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 665 22 0 0 0 chrX 10562368 10562390 -11860437 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 25 0 0 0 chrX 10562706 10562731 -11860096 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 201 74 0 0 chrX 10564279 10564306 -11858521 + (CAGAA)n Simple_repeat Simple_repeat 2 28 0 1 665 223 250 0 0 chrX 10564537 10564585 -11858242 + CT-rich Low_complexity Low_complexity 3 50 0 1 665 552 219 7 13 chrX 10564858 10565011 -11857816 - SAR_DM Satellite Satellite -748 724 573 1 665 518 267 33 16 chrX 10564868 10565051 -11857776 + XDMR Unknown Unknown 1 186 -175 1 665 229 213 0 21 chrX 10565335 10565383 -11857444 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 665 224 122 41 0 chrX 10565874 10565923 -11856904 + (CATA)n Simple_repeat Simple_repeat 3 53 0 1 665 189 74 0 0 chrX 10568198 10568225 -11854602 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 665 222 235 0 0 chrX 10571466 10571517 -11851310 + A-rich Low_complexity Low_complexity 1 51 0 1 665 30 27 0 0 chrX 10574540 10574577 -11848250 + AT_rich Low_complexity Low_complexity 1 37 0 1 665 225 0 0 0 chrX 10574915 10574940 -11847887 + (ATG)n Simple_repeat Simple_repeat 1 25 0 1 665 195 100 0 0 chrX 10575406 10575436 -11847391 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 665 22 0 0 0 chrX 10576363 10576385 -11846442 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 234 207 0 0 chrX 10576467 10576525 -11846302 + A-rich Low_complexity Low_complexity 1 58 0 1 665 22 70 0 0 chrX 10576945 10576988 -11845839 + AT_rich Low_complexity Low_complexity 1 43 0 1 665 291 212 0 0 chrX 10578139 10578219 -11844608 + GA-rich Low_complexity Low_complexity 2 81 0 1 665 237 163 0 0 chrX 10578988 10579037 -11843790 + (AGTTG)n Simple_repeat Simple_repeat 5 53 0 1 665 222 167 0 23 chrX 10579627 10579670 -11843157 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 665 3994 2 0 0 chrX 10580138 10580566 -11842261 - ROO_LTR LTR Pao 0 428 1 1 665 4276 6 35 0 chrX 10580566 10581081 -11841746 - ROO_I LTR Pao 0 8256 7724 1 665 33685 1 3 0 chrX 10581069 10584789 -11838038 - ROO_I LTR Pao -4527 3729 1 1 665 4002 2 0 0 chrX 10584789 10585217 -11837610 - ROO_LTR LTR Pao 0 428 1 1 665 195 114 0 0 chrX 10585830 10585865 -11836962 + (T)n Simple_repeat Simple_repeat 1 35 0 1 665 180 0 0 0 chrX 10587057 10587077 -11835750 + (CAAAC)n Simple_repeat Simple_repeat 3 22 0 1 665 35 41 0 0 chrX 10587447 10587496 -11835331 + AT_rich Low_complexity Low_complexity 1 49 0 1 665 25 0 0 0 chrX 10587514 10587539 -11835288 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 213 94 0 0 chrX 10587882 10587914 -11834913 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 665 210 118 0 0 chrX 10588322 10588356 -11834471 + (CAGT)n Simple_repeat Simple_repeat 2 35 0 1 665 180 0 0 0 chrX 10588741 10588761 -11834066 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 665 186 118 0 0 chrX 10589287 10589321 -11833506 + (T)n Simple_repeat Simple_repeat 1 34 0 1 665 21 0 0 0 chrX 10590161 10590182 -11832645 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 348 133 0 0 chrX 10591790 10591850 -11830977 + (CAG)n Simple_repeat Simple_repeat 1 60 0 1 665 248 102 0 20 chrX 10592211 10592261 -11830566 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 665 25 0 0 0 chrX 10592806 10592831 -11829996 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 186 43 0 0 chrX 10593360 10593383 -11829444 + (CACCAT)n Simple_repeat Simple_repeat 5 27 0 1 665 327 105 0 0 chrX 10593389 10593446 -11829381 + (CAG)n Simple_repeat Simple_repeat 1 57 0 1 665 352 138 25 0 chrX 10593508 10593588 -11829239 + ROO_I LTR Pao 653 734 -7522 1 665 378 107 0 0 chrX 10593677 10593733 -11829094 + (CAG)n Simple_repeat Simple_repeat 1 56 0 1 665 203 88 29 0 chrX 10594044 10594078 -11828749 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 665 294 159 0 0 chrX 10594076 10594145 -11828682 + (CAG)n Simple_repeat Simple_repeat 1 69 0 1 665 269 176 0 34 chrX 10594437 10594525 -11828302 + ROO_I LTR Pao 648 732 -7524 1 665 405 123 0 0 chrX 10594658 10594723 -11828104 + (CAG)n Simple_repeat Simple_repeat 1 65 0 1 665 245 250 0 0 chrX 10594877 10594933 -11827894 + GA-rich Low_complexity Low_complexity 1 56 0 1 665 203 156 0 0 chrX 10595018 10595050 -11827777 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 665 312 250 19 9 chrX 10596539 10596644 -11826183 + (CAG)n Simple_repeat Simple_repeat 3 108 0 1 665 27 49 0 0 chrX 10596878 10596919 -11825908 + AT_rich Low_complexity Low_complexity 1 41 0 1 665 294 158 0 0 chrX 10596981 10597038 -11825789 + ROO_I LTR Pao 670 726 -7530 1 665 273 247 0 0 chrX 10597649 10597730 -11825097 + (CGA)n Simple_repeat Simple_repeat 1 81 0 1 665 231 250 0 0 chrX 10599945 10600013 -11822814 + (CGG)n Simple_repeat Simple_repeat 1 68 0 1 665 233 151 0 19 chrX 10600102 10600156 -11822671 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 665 25 75 0 0 chrX 10601401 10601454 -11821373 + AT_rich Low_complexity Low_complexity 1 53 0 1 665 216 0 0 0 chrX 10602880 10602904 -11819923 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 665 206 231 0 0 chrX 10603317 10603356 -11819471 + (TATG)n Simple_repeat Simple_repeat 1 39 0 1 665 186 103 0 0 chrX 10603558 10603587 -11819240 + (CATA)n Simple_repeat Simple_repeat 4 32 0 1 665 248 183 0 62 chrX 10604344 10604408 -11818419 + (CAGAGA)n Simple_repeat Simple_repeat 5 64 0 1 665 27 29 0 0 chrX 10604797 10604831 -11817996 + AT_rich Low_complexity Low_complexity 1 34 0 1 665 21 0 0 0 chrX 10604933 10604954 -11817873 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 339 150 0 0 chrX 10605351 10605411 -11817416 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 665 270 106 0 0 chrX 10606854 10606901 -11815926 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 665 198 171 0 0 chrX 10608489 10608530 -11814297 + (CTG)n Simple_repeat Simple_repeat 3 43 0 1 665 264 271 12 12 chrX 10609753 10609839 -11812988 + (CTG)n Simple_repeat Simple_repeat 2 87 0 1 665 208 229 0 0 chrX 10609869 10609917 -11812910 + GA-rich Low_complexity Low_complexity 2 49 0 1 665 297 75 0 0 chrX 10609982 10610022 -11812805 + (CTG)n Simple_repeat Simple_repeat 1 40 0 1 665 318 106 0 0 chrX 10610808 10610855 -11811972 + (ATG)n Simple_repeat Simple_repeat 1 47 0 1 665 216 241 0 0 chrX 10611002 10611056 -11811771 + (CGA)n Simple_repeat Simple_repeat 1 54 0 1 665 213 39 0 0 chrX 10611429 10611455 -11811372 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 1 665 219 114 0 0 chrX 10612554 10612589 -11810238 + (A)n Simple_repeat Simple_repeat 1 35 0 1 665 231 61 0 0 chrX 10613391 10613424 -11809403 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 665 204 182 0 0 chrX 10615393 10615437 -11807390 + T-rich Low_complexity Low_complexity 1 44 0 1 665 255 190 0 0 chrX 10615648 10615706 -11807121 + (CAT)n Simple_repeat Simple_repeat 1 58 0 1 665 240 59 0 0 chrX 10616014 10616048 -11806779 + (CGAAA)n Simple_repeat Simple_repeat 3 36 0 1 665 21 0 0 0 chrX 10616402 10616423 -11806404 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 204 67 0 0 chrX 10616842 10616872 -11805955 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 666 23 0 0 0 chrX 10617049 10617072 -11805755 + AT_rich Low_complexity Low_complexity 1 23 0 1 666 198 143 0 0 chrX 10618404 10618439 -11804388 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 666 282 95 0 0 chrX 10618999 10619041 -11803786 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 666 219 69 0 0 chrX 10619988 10620017 -11802810 + (GGA)n Simple_repeat Simple_repeat 3 31 0 1 666 207 186 0 0 chrX 10622105 10622148 -11800679 + T-rich Low_complexity Low_complexity 1 43 0 1 666 27 29 0 0 chrX 10623284 10623318 -11799509 + AT_rich Low_complexity Low_complexity 1 34 0 1 666 25 0 0 0 chrX 10624392 10624417 -11798410 + AT_rich Low_complexity Low_complexity 1 25 0 1 666 180 77 0 0 chrX 10624522 10624548 -11798279 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 666 214 205 0 0 chrX 10624733 10624772 -11798055 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1 666 237 83 0 0 chrX 10625639 10625675 -11797152 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 666 219 69 0 0 chrX 10628196 10628225 -11794602 + (ACCG)n Simple_repeat Simple_repeat 4 32 0 1 666 222 241 19 0 chrX 10629703 10629757 -11793070 + (CAA)n Simple_repeat Simple_repeat 1 55 0 1 666 252 59 0 0 chrX 10629822 10629856 -11792971 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 666 261 109 0 0 chrX 10631379 10631425 -11791402 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 666 22 35 0 0 chrX 10632626 10632655 -11790172 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 335 132 15 0 chrX 10633045 10633113 -11789714 + (CAGA)n Simple_repeat Simple_repeat 4 72 0 1 666 194 105 26 0 chrX 10633222 10633260 -11789567 + (TAAAAA)n Simple_repeat Simple_repeat 1 39 0 1 666 23 33 0 0 chrX 10633622 10633652 -11789175 + AT_rich Low_complexity Low_complexity 1 30 0 1 666 201 74 0 0 chrX 10633939 10633966 -11788861 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1 666 231 61 0 0 chrX 10634391 10634424 -11788403 + (CAGTT)n Simple_repeat Simple_repeat 1 33 0 1 666 324 70 0 0 chrX 10635564 10635607 -11787220 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 666 220 200 0 0 chrX 10635632 10635677 -11787150 + CT-rich Low_complexity Low_complexity 2 46 0 1 666 262 245 0 29 chrX 10638050 10638155 -11784672 - ROO_I LTR Pao -7522 734 633 1 666 288 91 0 0 chrX 10642290 10642334 -11780493 + (CAG)n Simple_repeat Simple_repeat 1 44 0 1 666 293 140 18 0 chrX 10643406 10643463 -11779364 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 666 222 191 0 0 chrX 10645313 10645355 -11777472 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 666 204 125 0 0 chrX 10648557 10648589 -11774238 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 666 183 80 0 0 chrX 10648893 10648918 -11773909 + (TCCTG)n Simple_repeat Simple_repeat 1 25 0 1 666 189 0 0 0 chrX 10648939 10648960 -11773867 + (TGGA)n Simple_repeat Simple_repeat 3 23 0 1 666 21 0 0 0 chrX 10650374 10650395 -11772432 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 238 204 0 0 chrX 10650834 10650888 -11771939 + T-rich Low_complexity Low_complexity 1 54 0 1 666 180 77 0 0 chrX 10653020 10653046 -11769781 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 1 666 210 105 0 0 chrX 10654042 10654080 -11768747 + (T)n Simple_repeat Simple_repeat 1 38 0 1 666 32 0 0 0 chrX 10654100 10654132 -11768695 + AT_rich Low_complexity Low_complexity 1 32 0 1 666 206 128 26 0 chrX 10656158 10656197 -11766630 + (CTG)n Simple_repeat Simple_repeat 2 41 0 1 666 250 253 0 0 chrX 10656301 10656376 -11766451 - ROO_I LTR Pao -7526 730 656 1 666 23 0 0 0 chrX 10656870 10656893 -11765934 + AT_rich Low_complexity Low_complexity 1 23 0 1 666 212 234 0 0 chrX 10657454 10657501 -11765326 + GA-rich Low_complexity Low_complexity 4 50 0 1 666 255 241 24 0 chrX 10657985 10658068 -11764759 + (CAA)n Simple_repeat Simple_repeat 3 87 0 1 666 23 0 0 0 chrX 10659414 10659437 -11763390 + AT_rich Low_complexity Low_complexity 1 23 0 1 666 215 255 0 19 chrX 10660937 10660989 -11761838 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 1 666 180 77 0 0 chrX 10661055 10661081 -11761746 + (TTTCG)n Simple_repeat Simple_repeat 3 28 0 1 666 210 207 0 33 chrX 10661166 10661226 -11761601 + T-rich Low_complexity Low_complexity 5 62 0 1 666 231 214 0 0 chrX 10661630 10661672 -11761155 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 666 228 163 0 0 chrX 10661922 10661965 -11760862 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 666 202 132 0 73 chrX 10664663 10664704 -11758123 + polypurine Low_complexity Low_complexity 1 38 0 1 666 254 73 0 24 chrX 10665295 10665337 -11757490 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 666 358 36 36 0 chrX 10665428 10665484 -11757343 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 666 192 125 0 0 chrX 10666416 10666448 -11756379 + (CTAA)n Simple_repeat Simple_repeat 3 34 0 1 666 262 0 0 0 chrX 10666752 10666789 -11756038 - TIRANT_LTR LTR Gypsy -380 37 1 1 666 216 0 0 0 chrX 10669191 10669215 -11753612 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 666 211 214 0 0 chrX 10671551 10671593 -11751234 + (TATG)n Simple_repeat Simple_repeat 3 44 0 1 666 21 0 0 0 chrX 10672801 10672822 -11750005 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 211 128 0 25 chrX 10673775 10673815 -11749012 + (CAAAT)n Simple_repeat Simple_repeat 2 40 0 1 666 23 33 0 0 chrX 10675024 10675054 -11747773 + AT_rich Low_complexity Low_complexity 1 30 0 1 666 25 31 0 0 chrX 10675384 10675416 -11747411 + AT_rich Low_complexity Low_complexity 1 32 0 1 666 262 159 63 0 chrX 10675571 10675634 -11747193 + T-rich Low_complexity Low_complexity 1 67 0 1 666 22 0 0 0 chrX 10675634 10675656 -11747171 + AT_rich Low_complexity Low_complexity 1 22 0 1 666 27 0 0 0 chrX 10678268 10678295 -11744532 + AT_rich Low_complexity Low_complexity 1 27 0 1 666 209 54 81 0 chrX 10681230 10681267 -11741560 + (TTATA)n Simple_repeat Simple_repeat 2 41 0 1 666 278 200 40 50 chrX 10681496 10681596 -11741231 - XDMR Unknown Unknown -262 99 1 1 666 419 242 18 24 chrX 10681635 10681800 -11741027 - XDMR Unknown Unknown 0 361 198 1 666 199 104 20 20 chrX 10682604 10682653 -11740174 + (TTTTTG)n Simple_repeat Simple_repeat 4 52 0 1 666 33 85 0 0 chrX 10683377 10683459 -11739368 + AT_rich Low_complexity Low_complexity 1 82 0 1 666 23 33 0 0 chrX 10683608 10683638 -11739189 + AT_rich Low_complexity Low_complexity 1 30 0 1 666 235 255 10 31 chrX 10684590 10684687 -11738140 + (TTTCG)n Simple_repeat Simple_repeat 2 96 0 1 666 26 50 0 0 chrX 10686048 10686088 -11736739 + AT_rich Low_complexity Low_complexity 1 40 0 1 666 31 26 0 0 chrX 10686502 10686540 -11736287 + AT_rich Low_complexity Low_complexity 1 38 0 1 666 201 159 0 0 chrX 10687502 10687546 -11735281 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 666 231 88 0 0 chrX 10687651 10687685 -11735142 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 666 220 204 0 0 chrX 10688323 10688377 -11734450 + T-rich Low_complexity Low_complexity 1 54 0 1 666 272 270 23 23 chrX 10689947 10690076 -11732751 + T-rich Low_complexity Low_complexity 6 134 0 1 666 38 51 0 0 chrX 10690223 10690282 -11732545 + AT_rich Low_complexity Low_complexity 1 59 0 1 666 498 70 0 0 chrX 10690998 10691069 -11731758 + (CTG)n Simple_repeat Simple_repeat 3 73 0 1 666 240 246 17 43 chrX 10691121 10691236 -11731591 + (CTG)n Simple_repeat Simple_repeat 1 112 0 1 666 193 209 0 29 chrX 10694024 10694093 -11728734 + (TAG)n Simple_repeat Simple_repeat 1 67 0 1 666 336 83 0 0 chrX 10694194 10694242 -11728585 + (TAG)n Simple_repeat Simple_repeat 2 49 0 1 666 22 35 0 0 chrX 10694980 10695009 -11727818 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 218 303 0 13 chrX 10695321 10695398 -11727429 + GA-rich Low_complexity Low_complexity 2 77 0 1 666 37 39 0 0 chrX 10696662 10696713 -11726114 + AT_rich Low_complexity Low_complexity 1 51 0 1 666 423 0 0 0 chrX 10697103 10697150 -11725677 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 666 25 0 0 0 chrX 10697741 10697766 -11725061 + AT_rich Low_complexity Low_complexity 1 25 0 1 666 21 0 0 0 chrX 10697816 10697837 -11724990 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 205 266 0 15 chrX 10699321 10699386 -11723441 + (TTG)n Simple_repeat Simple_repeat 3 66 0 1 666 203 224 0 39 chrX 10699932 10699983 -11722844 + CT-rich Low_complexity Low_complexity 3 51 0 1 666 21 0 0 0 chrX 10700701 10700722 -11722105 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 238 222 0 16 chrX 10700758 10700822 -11722005 + (TTG)n Simple_repeat Simple_repeat 3 65 0 1 666 198 118 0 0 chrX 10701922 10701956 -11720871 + (CGAAT)n Simple_repeat Simple_repeat 1 34 0 1 666 246 116 0 0 chrX 10704739 10704782 -11718045 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 666 209 184 0 0 chrX 10705321 10705359 -11717468 + CT-rich Low_complexity Low_complexity 3 40 0 1 666 216 0 0 0 chrX 10706785 10706809 -11716018 + (T)n Simple_repeat Simple_repeat 1 24 0 1 666 234 105 0 0 chrX 10708948 10708986 -11713841 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 666 227 292 0 0 chrX 10709143 10709208 -11713619 + T-rich Low_complexity Low_complexity 1 65 0 1 666 225 219 15 15 chrX 10709730 10709795 -11713032 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 666 241 179 0 51 chrX 10709916 10709975 -11712852 + (TGAG)n Simple_repeat Simple_repeat 1 56 0 1 666 23 54 0 0 chrX 10710233 10710270 -11712557 + AT_rich Low_complexity Low_complexity 1 37 0 1 666 294 125 0 0 chrX 10711193 10711241 -11711586 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 666 35 0 0 0 chrX 10711952 10711987 -11710840 + AT_rich Low_complexity Low_complexity 1 35 0 1 666 267 31 0 0 chrX 10712860 10712892 -11709935 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 666 246 105 0 0 chrX 10713250 10713288 -11709539 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 666 216 269 0 0 chrX 10716332 10716384 -11706443 + CT-rich Low_complexity Low_complexity 2 53 0 1 666 225 327 0 0 chrX 10716464 10716574 -11706253 + T-rich Low_complexity Low_complexity 1 110 0 1 666 209 238 32 0 chrX 10717652 10717715 -11705112 + CT-rich Low_complexity Low_complexity 5 69 0 1 666 234 0 0 0 chrX 10718560 10718586 -11704241 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 666 21 36 0 0 chrX 10719861 10719889 -11702938 + AT_rich Low_complexity Low_complexity 1 28 0 1 666 207 191 0 0 chrX 10721011 10721058 -11701769 + A-rich Low_complexity Low_complexity 1 47 0 1 666 23 0 0 0 chrX 10721949 10721972 -11700855 + AT_rich Low_complexity Low_complexity 1 23 0 1 666 195 69 0 0 chrX 10723333 10723362 -11699465 + (GGATG)n Simple_repeat Simple_repeat 2 30 0 1 666 218 279 0 0 chrX 10723488 10723556 -11699271 + T-rich Low_complexity Low_complexity 1 68 0 1 666 250 242 15 0 chrX 10723708 10723774 -11699053 + CT-rich Low_complexity Low_complexity 1 67 0 1 666 219 69 0 0 chrX 10724192 10724221 -11698606 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 666 36 0 0 0 chrX 10724254 10724290 -11698537 + AT_rich Low_complexity Low_complexity 1 36 0 1 666 1983 276 28 25 chrX 10724343 10724507 -11698320 - SAR_DM Satellite Satellite -230 1242 687 1 666 2147 126 8 6 chrX 10724507 10724867 -11697960 + XDMR Unknown Unknown 1 361 0 1 666 2306 119 3 0 chrX 10724867 10725227 -11697600 + XDMR Unknown Unknown 1 361 0 1 666 1029 142 5 40 chrX 10725227 10725425 -11697402 + XDMR Unknown Unknown 1 191 -170 1 666 1983 276 28 25 chrX 10725227 10725362 -11697465 - SAR_DM Satellite Satellite -230 686 221 1 666 21 0 0 0 chrX 10726242 10726263 -11696564 + AT_rich Low_complexity Low_complexity 1 21 0 1 666 28 79 0 0 chrX 10726425 10726488 -11696339 + AT_rich Low_complexity Low_complexity 1 63 0 1 666 29 0 0 0 chrX 10727401 10727430 -11695397 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 22 0 0 0 chrX 10727440 10727462 -11695365 + AT_rich Low_complexity Low_complexity 1 22 0 1 666 285 216 0 0 chrX 10729366 10729454 -11693373 + T-rich Low_complexity Low_complexity 1 88 0 1 666 207 246 0 47 chrX 10729856 10729920 -11692907 + (CGTG)n Simple_repeat Simple_repeat 2 62 0 1 666 401 144 0 35 chrX 10730161 10730247 -11692580 + T-rich Low_complexity Low_complexity 1 83 0 1 666 192 97 0 0 chrX 10731874 10731905 -11690922 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1 666 210 37 0 0 chrX 10733075 10733102 -11689725 + (GCTG)n Simple_repeat Simple_repeat 1 27 0 1 666 225 0 0 0 chrX 10733190 10733215 -11689612 + (GGTTG)n Simple_repeat Simple_repeat 4 28 0 1 666 202 146 24 0 chrX 10733752 10733793 -11689034 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 666 206 196 21 21 chrX 10734787 10734834 -11687993 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1 666 267 31 0 0 chrX 10736772 10736804 -11686023 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 666 21 57 0 0 chrX 10742641 10742676 -11680151 + AT_rich Low_complexity Low_complexity 1 35 0 1 666 198 118 0 0 chrX 10744245 10744279 -11678548 + (CGA)n Simple_repeat Simple_repeat 2 35 0 1 667 21 36 0 0 chrX 10749055 10749083 -11673744 + AT_rich Low_complexity Low_complexity 1 28 0 1 667 217 325 0 0 chrX 10752135 10752215 -11670612 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 667 222 37 0 0 chrX 10753271 10753298 -11669529 + (CAG)n Simple_repeat Simple_repeat 1 27 0 1 667 224 160 20 20 chrX 10754177 10754228 -11668599 + (CAG)n Simple_repeat Simple_repeat 1 51 0 1 667 301 279 16 36 chrX 10755384 10755577 -11667250 - SAR_DM Satellite Satellite -371 1101 913 1 667 40 21 0 0 chrX 10755661 10755708 -11667119 + AT_rich Low_complexity Low_complexity 1 47 0 1 667 195 69 0 0 chrX 10756180 10756209 -11666618 + (CAT)n Simple_repeat Simple_repeat 1 29 0 1 667 207 191 47 16 chrX 10756536 10756600 -11666227 + (CAG)n Simple_repeat Simple_repeat 1 66 0 1 667 236 222 0 16 chrX 10757261 10757325 -11665502 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 667 318 26 0 0 chrX 10758080 10758119 -11664708 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 667 21 36 0 0 chrX 10758836 10758864 -11663963 + AT_rich Low_complexity Low_complexity 1 28 0 1 667 24 0 0 0 chrX 10759460 10759484 -11663343 + AT_rich Low_complexity Low_complexity 1 24 0 1 667 180 0 0 0 chrX 10759795 10759815 -11663012 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 667 301 302 0 0 chrX 10759978 10760104 -11662723 + A-rich Low_complexity Low_complexity 1 126 0 1 667 249 119 0 0 chrX 10761062 10761104 -11661723 + (CAT)n Simple_repeat Simple_repeat 1 42 0 1 667 339 105 0 0 chrX 10761893 10761950 -11660877 + (TCCA)n Simple_repeat Simple_repeat 4 60 0 1 667 21 57 0 0 chrX 10778424 10778459 -11644368 + AT_rich Low_complexity Low_complexity 1 35 0 1 667 21 36 0 0 chrX 10778627 10778655 -11644172 + AT_rich Low_complexity Low_complexity 1 28 0 1 667 216 0 0 0 chrX 10779461 10779485 -11643342 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 667 230 56 0 27 chrX 10779623 10779660 -11643167 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 667 27 0 0 0 chrX 10780297 10780324 -11642503 + AT_rich Low_complexity Low_complexity 1 27 0 1 667 192 158 0 0 chrX 10783114 10783152 -11639675 + T-rich Low_complexity Low_complexity 1 38 0 1 667 222 213 21 0 chrX 10785511 10785558 -11637269 + (AACTG)n Simple_repeat Simple_repeat 1 48 0 1 667 24 67 0 0 chrX 10785808 10785853 -11636974 + AT_rich Low_complexity Low_complexity 1 45 0 1 667 189 0 0 0 chrX 10786145 10786166 -11636661 + (TAGA)n Simple_repeat Simple_repeat 3 23 0 1 667 33 0 0 0 chrX 10786977 10787010 -11635817 + AT_rich Low_complexity Low_complexity 1 33 0 1 667 22 35 0 0 chrX 10795731 10795760 -11627067 + AT_rich Low_complexity Low_complexity 1 29 0 1 667 401 36 18 0 chrX 10796358 10796413 -11626414 + (TAA)n Simple_repeat Simple_repeat 3 58 0 1 667 29 47 0 0 chrX 10796474 10796517 -11626310 + AT_rich Low_complexity Low_complexity 1 43 0 1 667 183 156 0 0 chrX 10797195 10797227 -11625600 + (CATA)n Simple_repeat Simple_repeat 1 32 0 1 667 201 39 0 0 chrX 10797823 10797849 -11624978 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1 667 22 56 0 0 chrX 10798209 10798245 -11624582 + AT_rich Low_complexity Low_complexity 1 36 0 1 667 246 32 0 0 chrX 10799913 10799944 -11622883 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 667 253 250 0 38 chrX 10800402 10800481 -11622346 + ROO_I LTR Pao 652 727 -7529 1 667 276 241 64 75 chrX 10800412 10800481 -11622346 + TART_B1 LINE telomeric 10 158 -10496 1 667 462 231 0 0 chrX 10800481 10800585 -11622242 + ROO_I LTR Pao 641 744 -7512 1 667 276 241 64 75 chrX 10800585 10800600 -11622227 + TART_B1 LINE telomeric 159 195 -10459 1 667 243 235 0 0 chrX 10800737 10800788 -11622039 + (CAG)n Simple_repeat Simple_repeat 2 52 0 1 667 248 214 47 28 chrX 10800821 10800927 -11621900 + ROO_I LTR Pao 624 731 -7525 1 667 273 146 0 0 chrX 10801098 10801146 -11621681 + (CGA)n Simple_repeat Simple_repeat 3 50 0 1 667 320 208 0 0 chrX 10801240 10801312 -11621515 + ROO_I LTR Pao 660 731 -7525 1 667 483 95 0 0 chrX 10801665 10801739 -11621088 + (CAG)n Simple_repeat Simple_repeat 1 74 0 1 667 219 225 0 0 chrX 10802017 10802057 -11620770 + (CCCGAA)n Simple_repeat Simple_repeat 5 44 0 1 667 350 181 0 0 chrX 10806784 10806867 -11615960 + ROO_I LTR Pao 644 726 -7530 1 667 213 39 0 0 chrX 10808047 10808073 -11614754 + (CGAAT)n Simple_repeat Simple_repeat 5 30 0 1 667 255 79 0 0 chrX 10809975 10810013 -11612814 + (CAG)n Simple_repeat Simple_repeat 3 40 0 1 667 404 95 33 67 chrX 10811974 10812064 -11610763 + ROO_I LTR Pao 641 727 -7529 1 667 951 161 68 0 chrX 10812746 10812938 -11609889 + XDMR_DM Unknown Unknown 148 352 -8 1 667 2101 262 34 30 chrX 10812780 10812918 -11609909 - SAR_DM Satellite Satellite -255 1217 681 1 667 2218 125 6 3 chrX 10812918 10813278 -11609549 + XDMR Unknown Unknown 1 361 0 1 667 2303 128 3 0 chrX 10813278 10813638 -11609189 + XDMR Unknown Unknown 1 361 0 1 667 940 109 0 0 chrX 10813638 10813775 -11609052 + XDMR Unknown Unknown 1 137 -224 1 667 2101 262 34 30 chrX 10813638 10813747 -11609080 - SAR_DM Satellite Satellite -255 680 247 1 667 393 86 0 0 chrX 10813963 10814021 -11608806 + (CAG)n Simple_repeat Simple_repeat 1 58 0 1 667 641 129 9 0 chrX 10814147 10814263 -11608564 + (CAG)n Simple_repeat Simple_repeat 1 117 0 1 667 209 98 24 0 chrX 10815217 10815258 -11607569 + (CAA)n Simple_repeat Simple_repeat 1 42 0 1 667 34 72 0 0 chrX 10815566 10815635 -11607192 + AT_rich Low_complexity Low_complexity 1 69 0 1 667 312 176 0 0 chrX 10816797 10816865 -11605962 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 667 252 59 0 0 chrX 10817040 10817074 -11605753 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 667 33 43 0 0 chrX 10819978 10820025 -11602802 + AT_rich Low_complexity Low_complexity 1 47 0 1 667 365 149 0 65 chrX 10821360 10821453 -11601374 + ROO_I LTR Pao 641 727 -7529 1 667 21 0 0 0 chrX 10824104 10824125 -11598702 + AT_rich Low_complexity Low_complexity 1 21 0 1 667 557 259 111 35 chrX 10824199 10824487 -11598340 + XDMR_DM Unknown Unknown 38 347 -13 1 667 469 286 38 42 chrX 10824258 10824546 -11598281 - SAR_DM Satellite Satellite -906 566 280 1 667 204 179 35 35 chrX 10826253 10826311 -11596516 + (TTTCG)n Simple_repeat Simple_repeat 1 58 0 1 667 25 0 0 0 chrX 10826443 10826468 -11596359 + AT_rich Low_complexity Low_complexity 1 25 0 1 667 180 0 0 0 chrX 10828663 10828683 -11594144 + (CGAA)n Simple_repeat Simple_repeat 1 20 0 1 667 195 42 0 0 chrX 10829931 10829955 -11592872 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 667 219 88 0 0 chrX 10830525 10830559 -11592268 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 667 201 121 0 0 chrX 10831195 10831228 -11591599 + (CAAAT)n Simple_repeat Simple_repeat 3 35 0 1 667 24 0 0 0 chrX 10831584 10831608 -11591219 + AT_rich Low_complexity Low_complexity 1 24 0 1 667 225 94 0 0 chrX 10832176 10832208 -11590619 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 667 21 0 0 0 chrX 10833057 10833078 -11589749 + AT_rich Low_complexity Low_complexity 1 21 0 1 667 599 29 0 0 chrX 10833894 10833962 -11588865 - DNAREP1_DM LINE Penelope -526 68 1 1 667 192 77 0 0 chrX 10834911 10834937 -11587890 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1 667 216 238 0 0 chrX 10840444 10840486 -11582341 + (CCG)n Simple_repeat Simple_repeat 1 42 0 1 667 312 287 0 48 chrX 10843368 10843533 -11579294 - XDMR_DM Unknown Unknown -201 159 3 1 667 1142 296 44 38 chrX 10843453 10844198 -11578629 + SAR_DM Satellite Satellite 1 749 -164 1 667 830 281 27 33 chrX 10845184 10845552 -11577275 + SAR_DM Satellite Satellite 507 872 -600 1 667 238 231 111 37 chrX 10845578 10845686 -11577141 + SAR_DM Satellite Satellite 963 1078 -394 1 667 25 31 0 0 chrX 10845755 10845787 -11577040 + AT_rich Low_complexity Low_complexity 1 32 0 1 667 1087 261 51 26 chrX 10846574 10847042 -11575785 + SAR_DM Satellite Satellite 432 911 -561 1 667 477 280 27 27 chrX 10846845 10847069 -11575758 - XDMR Unknown Unknown 0 361 138 1 667 342 0 0 0 chrX 10848972 10849010 -11573817 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 667 211 146 24 0 chrX 10849184 10849225 -11573602 + A-rich Low_complexity Low_complexity 3 44 0 1 667 191 133 0 22 chrX 10849385 10849431 -11573396 + T-rich Low_complexity Low_complexity 4 48 0 1 667 201 94 0 0 chrX 10850030 10850062 -11572765 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 667 210 37 0 0 chrX 10851822 10851849 -11570978 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 1 667 23 68 0 0 chrX 10854130 10854174 -11568653 + AT_rich Low_complexity Low_complexity 1 44 0 1 667 468 62 0 0 chrX 10854810 10854874 -11567953 + (CAG)n Simple_repeat Simple_repeat 3 66 0 1 667 192 184 0 0 chrX 10854916 10854965 -11567862 + (CAG)n Simple_repeat Simple_repeat 1 49 0 1 667 264 30 0 0 chrX 10857540 10857573 -11565254 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1 667 258 196 0 0 chrX 10858273 10858365 -11564462 + CT-rich Low_complexity Low_complexity 2 93 0 1 667 237 250 0 0 chrX 10858404 10858456 -11564371 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1 667 31 0 0 0 chrX 10860630 10860661 -11562166 + AT_rich Low_complexity Low_complexity 1 31 0 1 667 180 0 0 0 chrX 10861223 10861243 -11561584 + (CAAGT)n Simple_repeat Simple_repeat 2 21 0 1 667 21 0 0 0 chrX 10861618 10861639 -11561188 + AT_rich Low_complexity Low_complexity 1 21 0 1 667 26 0 0 0 chrX 10861799 10861825 -11561002 + AT_rich Low_complexity Low_complexity 1 26 0 1 667 233 257 0 0 chrX 10863068 10863142 -11559685 + CT-rich Low_complexity Low_complexity 2 75 0 1 667 214 271 0 0 chrX 10863695 10863754 -11559073 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 1 667 234 217 14 14 chrX 10864056 10864126 -11558701 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 667 243 0 0 0 chrX 10864312 10864339 -11558488 + (CTG)n Simple_repeat Simple_repeat 2 28 0 1 667 1676 270 55 32 chrX 10865359 10865422 -11557405 + SAR_DM Satellite Satellite 1 87 -888 1 667 634 264 24 5 chrX 10865422 10865635 -11557192 - XDMR Unknown Unknown -144 217 1 1 667 1676 270 55 32 chrX 10865635 10866152 -11556675 + SAR_DM Satellite Satellite 88 811 -164 1 667 268 280 43 11 chrX 10866075 10866169 -11556658 - ARS406_DM Unknown Unknown -158 195 99 1 667 192 125 0 0 chrX 10866653 10866685 -11556142 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 667 377 103 15 0 chrX 10868361 10868429 -11554398 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 667 180 77 0 0 chrX 10872276 10872302 -11550525 + (TCC)n Simple_repeat Simple_repeat 3 28 0 1 667 211 216 0 0 chrX 10874712 10874749 -11548078 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1 667 28 29 0 0 chrX 10875458 10875493 -11547334 + AT_rich Low_complexity Low_complexity 1 35 0 1 667 25 0 0 0 chrX 10875861 10875886 -11546941 + AT_rich Low_complexity Low_complexity 1 25 0 1 667 207 69 0 0 chrX 10875968 10875997 -11546830 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 668 204 40 0 0 chrX 10879092 10879117 -11543710 + (GCTG)n Simple_repeat Simple_repeat 4 28 0 1 668 325 188 18 73 chrX 10880528 10880637 -11542190 - ROO_I LTR Pao -7513 743 641 1 668 218 105 0 26 chrX 10882352 10882391 -11540436 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 668 30 0 0 0 chrX 10882886 10882916 -11539911 + AT_rich Low_complexity Low_complexity 1 30 0 1 668 2286 268 28 41 chrX 10883963 10884167 -11538660 - SAR_DM Satellite Satellite -203 1442 1177 1 668 2370 117 3 0 chrX 10884167 10884527 -11538300 + XDMR Unknown Unknown 1 361 0 1 668 2286 268 28 41 chrX 10884527 10885425 -11537402 - SAR_DM Satellite Satellite -203 1176 1 1 668 1337 99 35 0 chrX 10885248 10885450 -11537377 + XDMR Unknown Unknown 1 209 -152 1 668 22 0 0 0 chrX 10886540 10886562 -11536265 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 189 0 0 0 chrX 10891375 10891396 -11531431 + (A)n Simple_repeat Simple_repeat 1 21 0 1 668 314 206 40 40 chrX 10892511 10892587 -11530240 - XDMR Unknown Unknown -220 141 66 1 668 310 200 75 104 chrX 10892587 10892617 -11530210 + SAR_DM Satellite Satellite 575 659 -813 1 668 189 74 0 0 chrX 10893192 10893219 -11529608 + (ACCG)n Simple_repeat Simple_repeat 4 30 0 1 668 218 178 0 43 chrX 10893682 10893729 -11529098 + (TATATG)n Simple_repeat Simple_repeat 5 49 0 1 668 189 0 0 0 chrX 10896032 10896053 -11526774 + (TTC)n Simple_repeat Simple_repeat 2 22 0 1 668 313 255 0 0 chrX 10896239 10896333 -11526494 + (CA)n Simple_repeat Simple_repeat 1 94 0 1 668 231 88 0 0 chrX 10897647 10897681 -11525146 + (A)n Simple_repeat Simple_repeat 1 34 0 1 668 200 237 0 33 chrX 10899571 10899632 -11523195 + (ATG)n Simple_repeat Simple_repeat 3 61 0 1 668 23 54 0 0 chrX 10906789 10906826 -11516001 + AT_rich Low_complexity Low_complexity 1 37 0 1 668 213 132 0 0 chrX 10909600 10909638 -11513189 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 668 233 57 0 28 chrX 10910517 10910553 -11512274 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 668 23 0 0 0 chrX 10911414 10911437 -11511390 + AT_rich Low_complexity Low_complexity 1 23 0 1 668 240 35 0 0 chrX 10911629 10911658 -11511169 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 668 192 97 0 0 chrX 10912982 10913013 -11509814 + (T)n Simple_repeat Simple_repeat 1 31 0 1 668 246 160 0 0 chrX 10914648 10914698 -11508129 + (CATTC)n Simple_repeat Simple_repeat 4 53 0 1 668 217 148 0 47 chrX 10914903 10914967 -11507860 + (TCTG)n Simple_repeat Simple_repeat 4 64 0 1 668 251 93 23 0 chrX 10915105 10915148 -11507679 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 1 668 230 284 0 0 chrX 10917216 10917297 -11505530 - XDMR_DM Unknown Unknown -270 90 10 1 668 760 240 5 5 chrX 10917226 10917423 -11505404 + SAR_DM Satellite Satellite 246 442 -1030 1 668 449 276 42 30 chrX 10917306 10917547 -11505280 - XDMR_DM Unknown Unknown 0 361 148 1 668 230 56 28 0 chrX 10918218 10918254 -11504573 + (TAAAAA)n Simple_repeat Simple_repeat 1 37 0 1 668 188 154 19 0 chrX 10919695 10919747 -11503080 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 668 216 163 0 0 chrX 10921717 10921760 -11501067 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 668 219 150 0 0 chrX 10923541 10923581 -11499246 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 668 258 196 0 0 chrX 10924623 10924679 -11498148 + (CGAAT)n Simple_repeat Simple_repeat 5 60 0 1 668 230 289 10 20 chrX 10924829 10924928 -11497899 + (CTCA)n Simple_repeat Simple_repeat 1 98 0 1 668 231 387 0 8 chrX 10926054 10926179 -11496648 + CT-rich Low_complexity Low_complexity 5 128 0 1 668 207 156 0 0 chrX 10926916 10926948 -11495879 + (CCA)n Simple_repeat Simple_repeat 2 33 0 1 668 25 0 0 0 chrX 10929944 10929969 -11492858 + AT_rich Low_complexity Low_complexity 1 25 0 1 668 246 81 0 0 chrX 10930425 10930462 -11492365 + (T)n Simple_repeat Simple_repeat 1 37 0 1 668 211 286 0 0 chrX 10930632 10930702 -11492125 + A-rich Low_complexity Low_complexity 1 70 0 1 668 279 93 0 0 chrX 10931872 10931915 -11490912 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 668 184 236 0 40 chrX 10933258 10933333 -11489494 + (CTCA)n Simple_repeat Simple_repeat 4 75 0 1 668 264 100 0 0 chrX 10933562 10933602 -11489225 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 668 183 139 0 0 chrX 10934056 10934092 -11488735 + (CCG)n Simple_repeat Simple_repeat 3 38 0 1 668 1018 131 27 11 chrX 10934514 10934699 -11488128 - XDMR Unknown Unknown -173 188 1 1 668 2042 247 30 35 chrX 10934550 10934699 -11488128 + SAR_DM Satellite Satellite 208 468 -1004 1 668 2430 106 3 0 chrX 10934699 10935059 -11487768 - XDMR Unknown Unknown 0 361 1 1 668 2042 247 30 35 chrX 10935059 10935377 -11487450 + SAR_DM Satellite Satellite 469 1030 -442 1 668 21 0 0 0 chrX 10936979 10937000 -11485827 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 23 0 0 0 chrX 10938612 10938635 -11484192 + AT_rich Low_complexity Low_complexity 1 23 0 1 668 255 133 0 0 chrX 10938838 10938883 -11483944 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 668 21 57 0 0 chrX 10939112 10939147 -11483680 + AT_rich Low_complexity Low_complexity 1 35 0 1 668 23 0 0 0 chrX 10945433 10945456 -11477371 + AT_rich Low_complexity Low_complexity 1 23 0 1 668 26 0 0 0 chrX 10946294 10946320 -11476507 + AT_rich Low_complexity Low_complexity 1 26 0 1 668 201 184 0 20 chrX 10947638 10947688 -11475139 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 668 207 69 0 0 chrX 10947827 10947856 -11474971 + (CATCC)n Simple_repeat Simple_repeat 2 30 0 1 668 218 81 0 26 chrX 10950425 10950463 -11472364 + (CATCC)n Simple_repeat Simple_repeat 5 41 0 1 668 53 30 0 0 chrX 10950678 10950745 -11472082 + AT_rich Low_complexity Low_complexity 1 67 0 1 668 215 125 0 24 chrX 10952134 10952175 -11470652 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 668 285 98 0 0 chrX 10953703 10953744 -11469083 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 668 22 0 0 0 chrX 10958035 10958057 -11464770 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 394 323 70 43 chrX 10959317 10959445 -11463382 - SAR_DM Satellite Satellite -259 1213 868 1 668 507 265 72 58 chrX 10959445 10959826 -11463001 + XDMR_DM Unknown Unknown 1 358 -3 1 668 394 323 70 43 chrX 10959826 10959928 -11462899 - SAR_DM Satellite Satellite -259 867 586 1 668 267 257 43 34 chrX 10959838 10959955 -11462872 + XDMR_DM Unknown Unknown 8 125 -235 1 668 212 167 0 0 chrX 10960786 10960828 -11461999 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 668 35 24 0 0 chrX 10961763 10961805 -11461022 + AT_rich Low_complexity Low_complexity 1 42 0 1 668 24 32 0 0 chrX 10962370 10962401 -11460426 + AT_rich Low_complexity Low_complexity 1 31 0 1 668 216 133 22 22 chrX 10962669 10962715 -11460112 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 668 189 0 0 0 chrX 10962732 10962753 -11460074 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 668 207 0 0 0 chrX 10963399 10963422 -11459405 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 668 257 221 58 0 chrX 10964825 10964911 -11457916 + (TGGG)n Simple_repeat Simple_repeat 3 93 0 1 668 24 0 0 0 chrX 10965344 10965368 -11457459 + AT_rich Low_complexity Low_complexity 1 24 0 1 668 22 0 0 0 chrX 10965479 10965501 -11457326 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 31 0 0 0 chrX 10972591 10972622 -11450205 + AT_rich Low_complexity Low_complexity 1 31 0 1 668 288 120 0 0 chrX 10975132 10975182 -11447645 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 668 180 77 0 0 chrX 10975964 10975990 -11446837 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 668 21 0 0 0 chrX 10976512 10976533 -11446294 + AT_rich Low_complexity Low_complexity 1 21 0 1 668 22 0 0 0 chrX 10977165 10977187 -11445640 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 24 67 0 0 chrX 10978531 10978576 -11444251 + AT_rich Low_complexity Low_complexity 1 45 0 1 668 30 77 0 0 chrX 10978959 10979024 -11443803 + AT_rich Low_complexity Low_complexity 1 65 0 1 668 306 50 0 0 chrX 10979393 10979433 -11443394 + (CAA)n Simple_repeat Simple_repeat 3 42 0 1 668 309 89 0 0 chrX 10979565 10979610 -11443217 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 668 324 111 0 0 chrX 10980436 10980490 -11442337 + (CGATA)n Simple_repeat Simple_repeat 1 54 0 1 668 215 79 0 26 chrX 10980503 10980542 -11442285 + (CCGAA)n Simple_repeat Simple_repeat 2 39 0 1 668 22 0 0 0 chrX 10982328 10982350 -11440477 + AT_rich Low_complexity Low_complexity 1 22 0 1 668 328 140 32 21 chrX 10988671 10988766 -11434061 + (TA)n Simple_repeat Simple_repeat 1 96 0 1 668 2474 8 0 0 chrX 10990085 10990351 -11432476 + DMLTR5 LTR Gypsy 1 266 0 1 668 7084 1 0 2 chrX 10990350 10991146 -11431681 + HMSBEAGLE_I LTR Gypsy 1 796 -5733 1 668 953 35 52 12 chrX 10991146 10991318 -11431509 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 668 51505 0 3 0 chrX 10991318 10996864 -11425963 + HMSBEAGLE_I LTR Gypsy 969 6529 0 1 668 2474 8 0 0 chrX 10996864 10997130 -11425697 + DMLTR5 LTR Gypsy 1 266 0 1 668 320 196 69 40 chrX 10999530 10999631 -11423196 - XDMR_DM Unknown Unknown -255 105 2 1 668 24 32 0 0 chrX 10999680 10999711 -11423116 + AT_rich Low_complexity Low_complexity 1 31 0 1 668 315 277 54 38 chrX 10999751 10999889 -11422938 - XDMR Unknown Unknown -117 244 1 1 668 399 274 0 0 chrX 10999889 10999991 -11422836 + SAR_DM Satellite Satellite 613 714 -758 1 668 461 313 36 23 chrX 11000000 11000307 -11422520 - XDMR_DM Unknown Unknown -47 313 3 1 668 264 343 57 24 chrX 11000307 11000505 -11422322 + SAR_DM Satellite Satellite 373 894 -578 1 668 27 29 0 0 chrX 11003676 11003710 -11419117 + AT_rich Low_complexity Low_complexity 1 34 0 1 668 26 30 0 0 chrX 11006477 11006510 -11416317 + AT_rich Low_complexity Low_complexity 1 33 0 1 668 235 195 0 0 chrX 11007278 11007319 -11415508 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 668 204 222 0 0 chrX 11007430 11007475 -11415352 + (TGG)n Simple_repeat Simple_repeat 2 46 0 1 668 240 111 0 0 chrX 11007547 11007592 -11415235 + (TCC)n Simple_repeat Simple_repeat 1 45 0 1 668 240 221 0 0 chrX 11008381 11008458 -11414369 + (TGG)n Simple_repeat Simple_repeat 1 77 0 1 668 451 340 0 6 chrX 11009751 11009908 -11412919 + (CGG)n Simple_repeat Simple_repeat 1 156 0 1 669 309 68 0 0 chrX 11010131 11010175 -11412652 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 669 186 224 0 0 chrX 11012459 11012508 -11410319 + CT-rich Low_complexity Low_complexity 4 52 0 1 669 199 191 14 14 chrX 11014534 11014603 -11408224 + (CTG)n Simple_repeat Simple_repeat 1 69 0 1 669 201 302 0 0 chrX 11014990 11015076 -11407751 + C-rich Low_complexity Low_complexity 2 87 0 1 669 255 272 19 10 chrX 11016658 11016762 -11406065 + (CTG)n Simple_repeat Simple_repeat 1 105 0 1 669 214 184 0 0 chrX 11017807 11017845 -11404982 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 669 238 276 56 28 chrX 11018021 11018129 -11404698 + (TTTCG)n Simple_repeat Simple_repeat 2 112 0 1 669 24 32 0 0 chrX 11020796 11020827 -11402000 + AT_rich Low_complexity Low_complexity 1 31 0 1 669 31 26 0 0 chrX 11023447 11023485 -11399342 + AT_rich Low_complexity Low_complexity 1 38 0 1 669 30 59 0 0 chrX 11024101 11024152 -11398675 + AT_rich Low_complexity Low_complexity 1 51 0 1 669 22 56 0 0 chrX 11026503 11026539 -11396288 + AT_rich Low_complexity Low_complexity 1 36 0 1 669 208 244 0 0 chrX 11026612 11026657 -11396170 + (TTG)n Simple_repeat Simple_repeat 3 47 0 1 669 394 91 33 65 chrX 11035611 11035764 -11387063 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 1 669 37 23 0 0 chrX 11037733 11037777 -11385050 + AT_rich Low_complexity Low_complexity 1 44 0 1 669 21 0 0 0 chrX 11037879 11037900 -11384927 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 204 118 59 0 chrX 11039586 11039637 -11383190 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 669 28 0 0 0 chrX 11040516 11040544 -11382283 + AT_rich Low_complexity Low_complexity 1 28 0 1 669 213 241 0 17 chrX 11041859 11041918 -11380909 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 669 29 0 0 0 chrX 11042708 11042737 -11380090 + AT_rich Low_complexity Low_complexity 1 29 0 1 669 21 0 0 0 chrX 11042811 11042832 -11379995 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 30 69 0 0 chrX 11042879 11042937 -11379890 + AT_rich Low_complexity Low_complexity 1 58 0 1 669 26 0 0 0 chrX 11043207 11043233 -11379594 + AT_rich Low_complexity Low_complexity 1 26 0 1 669 48 67 0 0 chrX 11046511 11046601 -11376226 + AT_rich Low_complexity Low_complexity 1 90 0 1 669 21 36 0 0 chrX 11047461 11047489 -11375338 + AT_rich Low_complexity Low_complexity 1 28 0 1 669 27 87 0 0 chrX 11047864 11047933 -11374894 + AT_rich Low_complexity Low_complexity 1 69 0 1 669 251 163 20 0 chrX 11048195 11048244 -11374583 - DNAREP1_DM LINE Penelope -543 51 2 1 669 202 278 0 0 chrX 11049020 11049074 -11373753 + CT-rich Low_complexity Low_complexity 2 55 0 1 669 273 29 0 0 chrX 11057446 11057480 -11365347 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 669 224 250 0 0 chrX 11057481 11057533 -11365294 + (TAA)n Simple_repeat Simple_repeat 3 54 0 1 669 23 0 0 0 chrX 11057700 11057723 -11365104 + AT_rich Low_complexity Low_complexity 1 23 0 1 669 189 0 0 0 chrX 11057879 11057900 -11364927 + (CCAA)n Simple_repeat Simple_repeat 4 24 0 1 669 43 56 0 0 chrX 11058427 11058498 -11364329 + AT_rich Low_complexity Low_complexity 1 71 0 1 669 22 0 0 0 chrX 11058692 11058714 -11364113 + AT_rich Low_complexity Low_complexity 1 22 0 1 669 24 32 0 0 chrX 11059886 11059917 -11362910 + AT_rich Low_complexity Low_complexity 1 31 0 1 669 24 0 0 0 chrX 11060952 11060976 -11361851 + AT_rich Low_complexity Low_complexity 1 24 0 1 669 221 146 0 152 chrX 11064213 11064318 -11358509 + (GCATG)n Simple_repeat Simple_repeat 3 91 0 1 669 220 200 0 0 chrX 11065999 11066049 -11356778 + (TGGA)n Simple_repeat Simple_repeat 1 50 0 1 669 207 146 0 0 chrX 11068115 11068156 -11354671 + (A)n Simple_repeat Simple_repeat 1 41 0 1 669 180 0 0 0 chrX 11068537 11068557 -11354270 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 1 669 312 70 0 0 chrX 11070191 11070234 -11352593 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 669 22 0 0 0 chrX 11071772 11071794 -11351033 + AT_rich Low_complexity Low_complexity 1 22 0 1 669 538 300 47 39 chrX 11071800 11072445 -11350382 - SAR_DM Satellite Satellite -596 876 227 1 669 215 183 0 32 chrX 11073685 11073747 -11349080 + (TTGG)n Simple_repeat Simple_repeat 1 60 0 1 669 27 62 0 0 chrX 11074004 11074052 -11348775 + AT_rich Low_complexity Low_complexity 1 48 0 1 669 381 58 0 0 chrX 11074674 11074726 -11348101 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 669 216 0 0 0 chrX 11076071 11076095 -11346732 + (ATG)n Simple_repeat Simple_repeat 2 25 0 1 669 24 0 0 0 chrX 11076095 11076119 -11346708 + AT_rich Low_complexity Low_complexity 1 24 0 1 669 21 0 0 0 chrX 11078317 11078338 -11344489 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 2093 8 26 11 chrX 11078338 11078609 -11344218 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 669 38969 1 1 0 chrX 11078609 11083086 -11339741 - BLASTOPIA_I LTR Gypsy 0 4481 1 1 669 2093 8 26 11 chrX 11083086 11083357 -11339470 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 669 24 67 0 0 chrX 11085018 11085063 -11337764 + AT_rich Low_complexity Low_complexity 1 45 0 1 669 234 269 0 0 chrX 11085606 11085673 -11337154 + T-rich Low_complexity Low_complexity 1 67 0 1 669 28 29 0 0 chrX 11086705 11086740 -11336087 + AT_rich Low_complexity Low_complexity 1 35 0 1 669 24 53 0 0 chrX 11086776 11086814 -11336013 + AT_rich Low_complexity Low_complexity 1 38 0 1 669 23 0 0 0 chrX 11087130 11087153 -11335674 + AT_rich Low_complexity Low_complexity 1 23 0 1 669 30 59 0 0 chrX 11087524 11087575 -11335252 + AT_rich Low_complexity Low_complexity 1 51 0 1 669 231 186 0 0 chrX 11088448 11088491 -11334336 + CT-rich Low_complexity Low_complexity 2 44 0 1 669 3716 0 0 0 chrX 11088516 11088946 -11333881 - Gypsy5_LTR LTR Gypsy 0 430 1 1 669 55549 0 1 0 chrX 11088946 11095450 -11327377 - Gypsy5_I LTR Gypsy 0 6509 1 1 669 3716 0 0 0 chrX 11095450 11095880 -11326947 - Gypsy5_LTR LTR Gypsy 0 430 1 1 669 26 30 0 0 chrX 11096338 11096371 -11326456 + AT_rich Low_complexity Low_complexity 1 33 0 1 669 180 77 0 0 chrX 11097003 11097029 -11325798 + (ATTCG)n Simple_repeat Simple_repeat 4 29 0 1 669 186 43 0 0 chrX 11097304 11097327 -11325500 + (TACGG)n Simple_repeat Simple_repeat 1 23 0 1 669 23 33 0 0 chrX 11097640 11097670 -11325157 + AT_rich Low_complexity Low_complexity 1 30 0 1 669 209 222 0 0 chrX 11098007 11098052 -11324775 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 669 37 23 0 0 chrX 11102251 11102295 -11320532 + AT_rich Low_complexity Low_complexity 1 44 0 1 669 278 235 0 0 chrX 11102660 11102728 -11320099 - XDMR_DM Unknown Unknown -283 77 10 1 669 445 305 23 14 chrX 11102671 11102887 -11319940 + SAR_DM Satellite Satellite 619 836 -636 1 669 377 235 51 46 chrX 11102770 11102966 -11319861 - XDMR Unknown Unknown -3 358 162 1 669 22 35 0 0 chrX 11103047 11103076 -11319751 + AT_rich Low_complexity Low_complexity 1 29 0 1 669 236 213 0 16 chrX 11104712 11104774 -11318053 + (CATA)n Simple_repeat Simple_repeat 2 62 0 1 669 224 173 0 39 chrX 11106311 11106389 -11316438 + T-rich Low_complexity Low_complexity 1 75 0 1 669 180 0 0 0 chrX 11109925 11109945 -11312882 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 669 22 56 0 0 chrX 11110745 11110781 -11312046 + AT_rich Low_complexity Low_complexity 1 36 0 1 669 224 182 0 57 chrX 11113391 11113461 -11309366 + T-rich Low_complexity Low_complexity 4 69 0 1 669 204 40 0 0 chrX 11113870 11113895 -11308932 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 669 259 185 12 36 chrX 11113962 11114046 -11308781 + T-rich Low_complexity Low_complexity 3 84 0 1 669 229 200 0 0 chrX 11114498 11114548 -11308279 + GA-rich Low_complexity Low_complexity 2 51 0 1 669 207 0 0 0 chrX 11114556 11114579 -11308248 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 669 346 178 22 0 chrX 11115277 11115367 -11307460 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 669 216 97 0 0 chrX 11115689 11115720 -11307107 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 669 458 108 14 0 chrX 11116348 11116422 -11306405 + (GA)n Simple_repeat Simple_repeat 1 75 0 1 669 233 109 22 0 chrX 11117051 11117097 -11305730 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 669 22 56 0 0 chrX 11117167 11117203 -11305624 + AT_rich Low_complexity Low_complexity 1 36 0 1 669 21 0 0 0 chrX 11117564 11117585 -11305242 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 189 139 0 0 chrX 11119030 11119073 -11303754 + (CTG)n Simple_repeat Simple_repeat 1 43 0 1 669 273 29 0 0 chrX 11120150 11120184 -11302643 + (TGG)n Simple_repeat Simple_repeat 2 35 0 1 669 195 139 0 0 chrX 11120697 11120733 -11302094 + (GAAAA)n Simple_repeat Simple_repeat 1 36 0 1 669 218 255 0 0 chrX 11121653 11121700 -11301127 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 669 180 77 0 0 chrX 11121910 11121936 -11300891 + (T)n Simple_repeat Simple_repeat 1 26 0 1 669 237 146 0 0 chrX 11123047 11123095 -11299732 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 669 23 0 0 0 chrX 11124497 11124520 -11298307 + AT_rich Low_complexity Low_complexity 1 23 0 1 669 1202 293 13 22 chrX 11124590 11124752 -11298075 + SAR_DM Satellite Satellite 197 532 -940 1 669 2082 119 3 6 chrX 11124752 11125114 -11297713 - XDMR Unknown Unknown 0 361 1 1 669 1365 89 0 5 chrX 11125114 11125328 -11297499 - XDMR Unknown Unknown 0 361 149 1 669 1202 293 13 22 chrX 11125114 11125278 -11297549 + SAR_DM Satellite Satellite 533 878 -594 1 669 211 93 47 0 chrX 11128582 11128625 -11294202 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 669 23 33 0 0 chrX 11129499 11129529 -11293298 + AT_rich Low_complexity Low_complexity 1 30 0 1 669 21 36 0 0 chrX 11131912 11131940 -11290887 + AT_rich Low_complexity Low_complexity 1 28 0 1 669 24 85 0 0 chrX 11131953 11132012 -11290815 + AT_rich Low_complexity Low_complexity 1 59 0 1 669 222 174 0 0 chrX 11133986 11134032 -11288795 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 669 225 94 0 0 chrX 11134063 11134095 -11288732 + (CAG)n Simple_repeat Simple_repeat 3 34 0 1 669 22 56 0 0 chrX 11134172 11134208 -11288619 + AT_rich Low_complexity Low_complexity 1 36 0 1 669 3361 5 7 7 chrX 11134584 11134997 -11287830 + DM297_LTR LTR Gypsy 1 413 -1 1 669 312 27 0 0 chrX 11134997 11135034 -11287793 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 669 212 250 0 0 chrX 11135152 11135204 -11287623 + GA-rich Low_complexity Low_complexity 2 53 0 1 669 28 79 0 0 chrX 11137695 11137758 -11285069 + AT_rich Low_complexity Low_complexity 1 63 0 1 669 23 68 0 0 chrX 11138808 11138852 -11283975 + AT_rich Low_complexity Low_complexity 1 44 0 1 669 195 129 0 0 chrX 11139458 11139489 -11283338 + (CAAAT)n Simple_repeat Simple_repeat 5 35 0 1 670 183 42 0 0 chrX 11141185 11141209 -11281618 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1 670 232 228 0 0 chrX 11141372 11141429 -11281398 + (CCG)n Simple_repeat Simple_repeat 1 57 0 1 670 198 209 0 0 chrX 11141993 11142036 -11280791 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 670 327 312 0 0 chrX 11142957 11143098 -11279729 - XDMR Unknown Unknown -220 141 1 1 670 937 300 47 47 chrX 11142989 11144332 -11278495 + SAR_DM Satellite Satellite 1 1342 -255 1 670 356 259 24 34 chrX 11144172 11144380 -11278447 - XDMR Unknown Unknown -3 358 153 1 670 234 136 0 0 chrX 11144813 11144857 -11277970 + (CAG)n Simple_repeat Simple_repeat 1 44 0 1 670 29 0 0 0 chrX 11145099 11145128 -11277699 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 228 111 0 0 chrX 11145306 11145342 -11277485 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 670 225 108 0 0 chrX 11145571 11145608 -11277219 + (CGAGT)n Simple_repeat Simple_repeat 1 37 0 1 670 233 57 0 28 chrX 11146458 11146494 -11276333 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 670 40 0 0 0 chrX 11147546 11147586 -11275241 + AT_rich Low_complexity Low_complexity 1 40 0 1 670 213 139 0 0 chrX 11147691 11147734 -11275093 + (A)n Simple_repeat Simple_repeat 1 43 0 1 670 30 0 0 0 chrX 11148640 11148670 -11274157 + AT_rich Low_complexity Low_complexity 1 30 0 1 670 180 0 0 0 chrX 11148851 11148871 -11273956 + (CAGG)n Simple_repeat Simple_repeat 3 22 0 1 670 224 88 17 50 chrX 11149934 11149994 -11272833 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 670 189 94 0 0 chrX 11152503 11152535 -11270292 + (ATG)n Simple_repeat Simple_repeat 1 32 0 1 670 23 33 0 0 chrX 11153502 11153532 -11269295 + AT_rich Low_complexity Low_complexity 1 30 0 1 670 327 25 0 0 chrX 11154375 11154415 -11268412 + (CAGG)n Simple_repeat Simple_repeat 3 42 0 1 670 23 0 0 0 chrX 11155026 11155049 -11267778 + AT_rich Low_complexity Low_complexity 1 23 0 1 670 21 0 0 0 chrX 11155466 11155487 -11267340 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 206 271 0 0 chrX 11155653 11155701 -11267126 + GA-rich Low_complexity Low_complexity 2 49 0 1 670 377 86 0 17 chrX 11156867 11156926 -11265901 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 670 231 222 0 0 chrX 11157702 11157756 -11265071 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 670 234 136 0 0 chrX 11157846 11157890 -11264937 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 670 186 103 0 0 chrX 11158169 11158198 -11264629 + (A)n Simple_repeat Simple_repeat 1 29 0 1 670 240 59 0 0 chrX 11159250 11159284 -11263543 + (T)n Simple_repeat Simple_repeat 1 34 0 1 670 22 35 0 0 chrX 11159942 11159971 -11262856 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 411 100 0 0 chrX 11160491 11160561 -11262266 + (CAGA)n Simple_repeat Simple_repeat 4 73 0 1 670 209 167 24 82 chrX 11161376 11161461 -11261366 + A-rich Low_complexity Low_complexity 5 84 0 1 670 186 43 0 0 chrX 11162078 11162101 -11260726 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 670 12190 5 0 0 chrX 11162650 11164085 -11258742 + M4DM DNA Transib 1 1435 0 1 670 773 305 51 54 chrX 11165347 11166914 -11255913 - SAR_DM Satellite Satellite -255 1563 1 1 670 421 239 36 36 chrX 11167103 11167298 -11255529 + XDMR Unknown Unknown 164 358 -3 1 670 439 303 27 19 chrX 11167140 11167396 -11255431 - SAR_DM Satellite Satellite -954 518 261 1 670 234 251 70 54 chrX 11167301 11167486 -11255341 + XDMR Unknown Unknown 1 188 -173 1 670 23 33 0 0 chrX 11168101 11168131 -11254696 + AT_rich Low_complexity Low_complexity 1 30 0 1 670 21 36 0 0 chrX 11168903 11168931 -11253896 + AT_rich Low_complexity Low_complexity 1 28 0 1 670 21 0 0 0 chrX 11170778 11170799 -11252028 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 29 28 0 0 chrX 11171090 11171126 -11251701 + AT_rich Low_complexity Low_complexity 1 36 0 1 670 21 0 0 0 chrX 11172384 11172405 -11250422 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 25 0 0 0 chrX 11174425 11174450 -11248377 + AT_rich Low_complexity Low_complexity 1 25 0 1 670 210 231 0 0 chrX 11175119 11175158 -11247669 + (CGGAA)n Simple_repeat Simple_repeat 2 40 0 1 670 297 89 0 0 chrX 11177052 11177097 -11245730 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 670 189 0 0 0 chrX 11177535 11177556 -11245271 + (CCCCCT)n Simple_repeat Simple_repeat 4 24 0 1 670 188 143 0 23 chrX 11178912 11178955 -11243872 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 670 201 182 0 0 chrX 11179329 11179384 -11243443 + (TGAG)n Simple_repeat Simple_repeat 4 58 0 1 670 234 105 0 0 chrX 11180804 11180842 -11241985 + (T)n Simple_repeat Simple_repeat 1 38 0 1 670 23 0 0 0 chrX 11183169 11183192 -11239635 + AT_rich Low_complexity Low_complexity 1 23 0 1 670 22 0 0 0 chrX 11183317 11183339 -11239488 + AT_rich Low_complexity Low_complexity 1 22 0 1 670 294 29 0 0 chrX 11183874 11183909 -11238918 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 670 305 103 0 33 chrX 11184054 11184114 -11238713 + (TTG)n Simple_repeat Simple_repeat 1 58 0 1 670 24 32 0 0 chrX 11184346 11184377 -11238450 + AT_rich Low_complexity Low_complexity 1 31 0 1 670 269 289 0 50 chrX 11185901 11186021 -11236806 + T-rich Low_complexity Low_complexity 1 114 0 1 670 267 54 0 0 chrX 11186082 11186119 -11236708 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 670 198 0 0 0 chrX 11186619 11186641 -11236186 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 670 23 0 0 0 chrX 11189126 11189149 -11233678 + AT_rich Low_complexity Low_complexity 1 23 0 1 670 279 122 0 0 chrX 11189859 11189908 -11232919 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 670 26 30 0 0 chrX 11190864 11190897 -11231930 + AT_rich Low_complexity Low_complexity 1 33 0 1 670 28 0 0 0 chrX 11191045 11191073 -11231754 + AT_rich Low_complexity Low_complexity 1 28 0 1 670 246 116 0 0 chrX 11191223 11191266 -11231561 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 670 567 0 0 0 chrX 11191783 11191846 -11230981 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 670 228 143 0 0 chrX 11192056 11192098 -11230729 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 670 339 25 0 0 chrX 11192162 11192202 -11230625 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1 670 22 0 0 0 chrX 11192383 11192405 -11230422 + AT_rich Low_complexity Low_complexity 1 22 0 1 670 21 0 0 0 chrX 11192714 11192735 -11230092 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 180 0 0 0 chrX 11193206 11193226 -11229601 + (TAGTG)n Simple_repeat Simple_repeat 5 24 0 1 670 48 77 0 0 chrX 11194052 11194156 -11228671 + AT_rich Low_complexity Low_complexity 1 104 0 1 670 25 31 0 0 chrX 11195632 11195664 -11227163 + AT_rich Low_complexity Low_complexity 1 32 0 1 670 24 0 0 0 chrX 11196893 11196917 -11225910 + AT_rich Low_complexity Low_complexity 1 24 0 1 670 39 22 0 0 chrX 11197524 11197570 -11225257 + AT_rich Low_complexity Low_complexity 1 46 0 1 670 22 56 0 0 chrX 11198191 11198227 -11224600 + AT_rich Low_complexity Low_complexity 1 36 0 1 670 25 31 0 0 chrX 11198265 11198297 -11224530 + AT_rich Low_complexity Low_complexity 1 32 0 1 670 27 0 0 0 chrX 11198993 11199020 -11223807 + AT_rich Low_complexity Low_complexity 1 27 0 1 670 210 245 0 0 chrX 11200607 11200656 -11222171 + CT-rich Low_complexity Low_complexity 2 50 0 1 670 295 57 18 36 chrX 11201605 11201660 -11221167 + (TTG)n Simple_repeat Simple_repeat 3 56 0 1 670 32 57 0 0 chrX 11201797 11201850 -11220977 + AT_rich Low_complexity Low_complexity 1 53 0 1 670 189 0 0 0 chrX 11202389 11202410 -11220417 + (T)n Simple_repeat Simple_repeat 1 21 0 1 670 359 263 73 22 chrX 11203718 11203803 -11219024 - XDMR Unknown Unknown -173 188 28 1 670 848 291 62 41 chrX 11203803 11203875 -11218952 + SAR_DM Satellite Satellite 256 332 -1140 1 670 198 0 0 0 chrX 11203875 11203897 -11218930 + (TATG)n Simple_repeat Simple_repeat 2 23 0 1 670 359 263 73 22 chrX 11203897 11203918 -11218909 - XDMR Unknown Unknown -334 27 1 1 670 848 291 62 41 chrX 11203918 11204433 -11218394 + SAR_DM Satellite Satellite 333 876 -596 1 670 460 226 36 41 chrX 11204276 11204470 -11218357 - XDMR Unknown Unknown -5 356 164 1 670 198 103 0 0 chrX 11205286 11205315 -11217512 + (CAATC)n Simple_repeat Simple_repeat 3 31 0 1 670 21 0 0 0 chrX 11205690 11205711 -11217116 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 21 0 0 0 chrX 11205928 11205949 -11216878 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 3764 5 0 0 chrX 11206151 11206575 -11216252 - Stalker2_LTR LTR Gypsy 0 424 1 1 670 35504 16 24 2 chrX 11206575 11213009 -11209818 - Stalker2_I LTR Gypsy 0 6530 1 1 670 3764 5 0 0 chrX 11213016 11213440 -11209387 - Stalker2_LTR LTR Gypsy 0 424 1 1 670 25 65 0 0 chrX 11215052 11215098 -11207729 + AT_rich Low_complexity Low_complexity 1 46 0 1 670 28 0 0 0 chrX 11215622 11215650 -11207177 + AT_rich Low_complexity Low_complexity 1 28 0 1 670 23 86 0 0 chrX 11218331 11218389 -11204438 + AT_rich Low_complexity Low_complexity 1 58 0 1 670 31 0 0 0 chrX 11220996 11221027 -11201800 + AT_rich Low_complexity Low_complexity 1 31 0 1 670 22 0 0 0 chrX 11221903 11221925 -11200902 + AT_rich Low_complexity Low_complexity 1 22 0 1 670 279 0 0 0 chrX 11227898 11227929 -11194898 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 670 24 0 0 0 chrX 11228484 11228508 -11194319 + AT_rich Low_complexity Low_complexity 1 24 0 1 670 240 86 0 0 chrX 11228660 11228695 -11194132 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 670 261 254 0 0 chrX 11229073 11229128 -11193699 + (TTG)n Simple_repeat Simple_repeat 3 57 0 1 670 211 217 0 0 chrX 11233177 11233223 -11189604 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 670 183 42 0 0 chrX 11234344 11234368 -11188459 + (T)n Simple_repeat Simple_repeat 1 24 0 1 670 223 191 0 0 chrX 11235636 11235678 -11187149 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 670 29 0 0 0 chrX 11236131 11236160 -11186667 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 261 57 0 0 chrX 11236663 11236698 -11186129 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 670 237 259 0 0 chrX 11236847 11236905 -11185922 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 670 240 122 0 0 chrX 11238624 11238665 -11184162 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 670 273 119 0 0 chrX 11241810 11241852 -11180975 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 670 31 26 0 0 chrX 11242843 11242881 -11179946 + AT_rich Low_complexity Low_complexity 1 38 0 1 670 265 246 0 0 chrX 11245362 11245423 -11177404 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 670 239 308 0 0 chrX 11247688 11247753 -11175074 + (CGG)n Simple_repeat Simple_repeat 2 66 0 1 670 186 71 0 0 chrX 11248643 11248671 -11174156 + (CCCCCT)n Simple_repeat Simple_repeat 2 29 0 1 670 690 139 0 0 chrX 11248800 11248937 -11173890 + (TA)n Simple_repeat Simple_repeat 2 138 0 1 670 21 0 0 0 chrX 11249637 11249658 -11173169 + AT_rich Low_complexity Low_complexity 1 21 0 1 670 352 155 82 0 chrX 11250725 11250822 -11172005 + ROO_I LTR Pao 639 743 -7513 1 670 195 100 0 0 chrX 11252180 11252210 -11170617 + (CGG)n Simple_repeat Simple_repeat 2 31 0 1 670 24 0 0 0 chrX 11252286 11252310 -11170517 + AT_rich Low_complexity Low_complexity 1 24 0 1 670 414 53 0 0 chrX 11252368 11252425 -11170402 + (TAA)n Simple_repeat Simple_repeat 3 59 0 1 670 334 0 0 42 chrX 11252592 11252640 -11170187 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 670 183 80 0 0 chrX 11255344 11255369 -11167458 + (TTTAG)n Simple_repeat Simple_repeat 5 29 0 1 670 498 280 16 11 chrX 11256580 11256768 -11166059 - XDMR Unknown Unknown -172 189 1 1 670 591 276 47 50 chrX 11256601 11256940 -11165887 + SAR_DM Satellite Satellite 1 337 -945 1 670 435 255 52 48 chrX 11256737 11256988 -11165839 - XDMR_DM Unknown Unknown 0 360 109 1 670 276 30 0 0 chrX 11259338 11259371 -11163456 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1 670 24 0 0 0 chrX 11260310 11260334 -11162493 + AT_rich Low_complexity Low_complexity 1 24 0 1 670 218 259 0 0 chrX 11264376 11264434 -11158393 + CT-rich Low_complexity Low_complexity 2 59 0 1 670 195 42 0 0 chrX 11264802 11264826 -11158001 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 670 21 57 0 0 chrX 11264990 11265025 -11157802 + AT_rich Low_complexity Low_complexity 1 35 0 1 670 227 284 0 75 chrX 11265695 11265775 -11157052 - ROO_I LTR Pao -7519 737 664 1 670 423 228 0 0 chrX 11266543 11266809 -11156018 + (TAGA)n Simple_repeat Simple_repeat 1 266 0 1 670 273 29 0 0 chrX 11266935 11266969 -11155858 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 670 22 35 0 0 chrX 11268122 11268151 -11154676 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 230 56 0 27 chrX 11268261 11268298 -11154529 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 670 22 35 0 0 chrX 11269062 11269091 -11153736 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 183 80 0 0 chrX 11269396 11269421 -11153406 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 671 189 0 0 0 chrX 11274200 11274221 -11148606 + (TC)n Simple_repeat Simple_repeat 1 21 0 1 671 21 57 0 0 chrX 11275490 11275525 -11147302 + AT_rich Low_complexity Low_complexity 1 35 0 1 671 25 31 0 0 chrX 11275704 11275736 -11147091 + AT_rich Low_complexity Low_complexity 1 32 0 1 671 923 18 58 23 chrX 11276769 11276942 -11145885 + (CTA)n Simple_repeat Simple_repeat 2 180 0 1 671 22 0 0 0 chrX 11277424 11277446 -11145381 + AT_rich Low_complexity Low_complexity 1 22 0 1 671 21 0 0 0 chrX 11277918 11277939 -11144888 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 22 0 0 0 chrX 11278404 11278426 -11144401 + AT_rich Low_complexity Low_complexity 1 22 0 1 671 207 203 0 0 chrX 11278603 11278672 -11144155 + T-rich Low_complexity Low_complexity 1 69 0 1 671 191 125 25 0 chrX 11279006 11279046 -11143781 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 671 21 0 0 0 chrX 11279275 11279296 -11143531 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 201 74 0 0 chrX 11280830 11280857 -11141970 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 671 228 122 0 0 chrX 11281386 11281427 -11141400 + (CAA)n Simple_repeat Simple_repeat 1 41 0 1 671 219 217 0 0 chrX 11281453 11281499 -11141328 + GA-rich Low_complexity Low_complexity 6 51 0 1 671 272 197 13 13 chrX 11281859 11281936 -11140891 + (CAG)n Simple_repeat Simple_repeat 2 78 0 1 671 23 54 0 0 chrX 11283587 11283624 -11139203 + AT_rich Low_complexity Low_complexity 1 37 0 1 671 225 152 65 0 chrX 11284060 11284106 -11138721 + (CGTG)n Simple_repeat Simple_repeat 2 50 0 1 671 200 132 26 0 chrX 11284317 11284355 -11138472 + GA-rich Low_complexity Low_complexity 2 40 0 1 671 183 80 0 0 chrX 11284508 11284533 -11138294 + (CGG)n Simple_repeat Simple_repeat 3 27 0 1 671 288 164 404 0 chrX 11284741 11284845 -11137982 - DNAREP1_DM LINE Penelope -3 591 446 1 671 274 197 15 62 chrX 11284879 11284944 -11137883 - DNAREP1_DM LINE Penelope -532 62 1 1 671 225 263 0 0 chrX 11285452 11285509 -11137318 + (TTG)n Simple_repeat Simple_repeat 1 57 0 1 671 183 80 0 0 chrX 11286204 11286229 -11136598 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1 671 209 288 0 0 chrX 11286976 11287042 -11135785 + A-rich Low_complexity Low_complexity 1 66 0 1 671 21 0 0 0 chrX 11288021 11288042 -11134785 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 198 71 0 0 chrX 11290188 11290216 -11132611 + (CAG)n Simple_repeat Simple_repeat 2 29 0 1 671 268 250 0 0 chrX 11290342 11290402 -11132425 + ROO_I LTR Pao 660 719 -7537 1 671 386 218 10 29 chrX 11290402 11290506 -11132321 + ROO_I LTR Pao 639 740 -7516 1 671 218 185 31 0 chrX 11291684 11291749 -11131078 + (TCTCTG)n Simple_repeat Simple_repeat 5 71 0 1 671 249 33 0 0 chrX 11291755 11291785 -11131042 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1 671 24 32 0 0 chrX 11292244 11292275 -11130552 + AT_rich Low_complexity Low_complexity 1 31 0 1 671 25 0 0 0 chrX 11293423 11293448 -11129379 + AT_rich Low_complexity Low_complexity 1 25 0 1 671 22 35 0 0 chrX 11294649 11294678 -11128149 + AT_rich Low_complexity Low_complexity 1 29 0 1 671 240 253 0 51 chrX 11294739 11294818 -11128009 + T-rich Low_complexity Low_complexity 5 79 0 1 671 251 93 0 23 chrX 11295068 11295112 -11127715 + (CATA)n Simple_repeat Simple_repeat 1 43 0 1 671 231 221 20 31 chrX 11296192 11296208 -11126619 + (CTA)n Simple_repeat Simple_repeat 2 18 0 1 671 234 0 0 0 chrX 11296208 11296234 -11126593 + (CCAA)n Simple_repeat Simple_repeat 3 28 0 1 671 231 221 20 31 chrX 11296234 11296315 -11126512 + (CTA)n Simple_repeat Simple_repeat 3 82 0 1 671 224 231 0 15 chrX 11296853 11296919 -11125908 + A-rich Low_complexity Low_complexity 2 66 0 1 671 203 311 0 11 chrX 11297068 11297159 -11125668 + CT-rich Low_complexity Low_complexity 1 90 0 1 671 23 0 0 0 chrX 11297331 11297354 -11125473 + AT_rich Low_complexity Low_complexity 1 23 0 1 671 24 0 0 0 chrX 11297598 11297622 -11125205 + AT_rich Low_complexity Low_complexity 1 24 0 1 671 235 211 19 0 chrX 11300270 11300322 -11122505 + (CAG)n Simple_repeat Simple_repeat 2 54 0 1 671 450 161 0 0 chrX 11300364 11300457 -11122370 + (CAA)n Simple_repeat Simple_repeat 3 95 0 1 671 321 82 0 0 chrX 11300821 11300870 -11121957 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 671 215 140 20 0 chrX 11301782 11301832 -11120995 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 671 23 0 0 0 chrX 11302183 11302206 -11120621 + AT_rich Low_complexity Low_complexity 1 23 0 1 671 200 79 0 50 chrX 11302426 11302466 -11120361 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1 671 300 53 0 0 chrX 11302969 11303007 -11119820 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 671 189 0 0 0 chrX 11303094 11303115 -11119712 + (CGAAT)n Simple_repeat Simple_repeat 5 25 0 1 671 183 80 0 0 chrX 11303298 11303323 -11119504 + (GAA)n Simple_repeat Simple_repeat 1 25 0 1 671 22 0 0 0 chrX 11305729 11305751 -11117076 + AT_rich Low_complexity Low_complexity 1 22 0 1 671 256 241 0 0 chrX 11307819 11307877 -11114950 + ARS406_DM Unknown Unknown 132 189 -164 1 671 2458 221 13 13 chrX 11307831 11308446 -11114381 - SAR_DM Satellite Satellite -611 861 247 1 671 21 0 0 0 chrX 11310827 11310848 -11111979 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 22 0 0 0 chrX 11313428 11313450 -11109377 + AT_rich Low_complexity Low_complexity 1 22 0 1 671 26 74 0 0 chrX 11315383 11315437 -11107390 + AT_rich Low_complexity Low_complexity 1 54 0 1 671 189 121 0 0 chrX 11316484 11316517 -11106310 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 671 183 188 0 0 chrX 11316948 11316996 -11105831 + A-rich Low_complexity Low_complexity 1 48 0 1 671 297 151 0 0 chrX 11317852 11317905 -11104922 + (CAA)n Simple_repeat Simple_repeat 1 53 0 1 671 24 53 0 0 chrX 11320942 11320980 -11101847 + AT_rich Low_complexity Low_complexity 1 38 0 1 671 21 57 0 0 chrX 11321009 11321044 -11101783 + AT_rich Low_complexity Low_complexity 1 35 0 1 671 189 107 0 0 chrX 11321373 11321401 -11101426 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 671 198 103 0 0 chrX 11321456 11321485 -11101342 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 671 189 0 0 0 chrX 11321797 11321818 -11101009 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1 671 21 71 0 0 chrX 11326934 11326976 -11095851 + AT_rich Low_complexity Low_complexity 1 42 0 1 671 210 156 0 0 chrX 11327141 11327186 -11095641 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 671 24 32 0 0 chrX 11327488 11327519 -11095308 + AT_rich Low_complexity Low_complexity 1 31 0 1 671 24 0 0 0 chrX 11328249 11328273 -11094554 + AT_rich Low_complexity Low_complexity 1 24 0 1 671 192 40 0 0 chrX 11328599 11328624 -11094203 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 671 270 116 0 0 chrX 11333297 11333340 -11089487 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 671 28 79 0 0 chrX 11335139 11335202 -11087625 + AT_rich Low_complexity Low_complexity 1 63 0 1 671 21 0 0 0 chrX 11335413 11335434 -11087393 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 227 236 0 18 chrX 11336450 11336506 -11086321 + A-rich Low_complexity Low_complexity 3 57 0 1 671 22 0 0 0 chrX 11339952 11339974 -11082853 + AT_rich Low_complexity Low_complexity 1 22 0 1 671 214 195 0 0 chrX 11341785 11341826 -11081001 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 671 249 217 14 0 chrX 11342796 11342865 -11079962 + T-rich Low_complexity Low_complexity 2 71 0 1 671 210 268 0 14 chrX 11343446 11343518 -11079309 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 1 671 23 0 0 0 chrX 11345824 11345847 -11076980 + AT_rich Low_complexity Low_complexity 1 23 0 1 671 216 67 0 0 chrX 11348122 11348152 -11074675 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 671 27 0 0 0 chrX 11352719 11352746 -11070081 + AT_rich Low_complexity Low_complexity 1 27 0 1 671 28 0 0 0 chrX 11352897 11352925 -11069902 + AT_rich Low_complexity Low_complexity 1 28 0 1 671 26 50 0 0 chrX 11353372 11353412 -11069415 + AT_rich Low_complexity Low_complexity 1 40 0 1 671 219 250 0 0 chrX 11353784 11353844 -11068983 + A-rich Low_complexity Low_complexity 1 60 0 1 671 29 47 0 0 chrX 11354224 11354267 -11068560 + AT_rich Low_complexity Low_complexity 1 43 0 1 671 207 219 0 0 chrX 11354861 11354902 -11067925 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 671 186 43 0 0 chrX 11356648 11356671 -11066156 + (A)n Simple_repeat Simple_repeat 1 23 0 1 671 23 33 0 0 chrX 11357130 11357160 -11065667 + AT_rich Low_complexity Low_complexity 1 30 0 1 671 21 0 0 0 chrX 11358753 11358774 -11064053 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 21 71 0 0 chrX 11359673 11359715 -11063112 + AT_rich Low_complexity Low_complexity 1 42 0 1 671 182 108 0 51 chrX 11359924 11359963 -11062864 + T-rich Low_complexity Low_complexity 3 39 0 1 671 345 100 0 0 chrX 11361815 11361865 -11060962 + (TAAAA)n Simple_repeat Simple_repeat 3 52 0 1 671 192 77 0 0 chrX 11362836 11362862 -11059965 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 671 249 151 0 0 chrX 11363769 11363822 -11059005 + T-rich Low_complexity Low_complexity 1 53 0 1 671 22 0 0 0 chrX 11365854 11365876 -11056951 + GC_rich Low_complexity Low_complexity 1 22 0 1 671 21 36 0 0 chrX 11366090 11366118 -11056709 + AT_rich Low_complexity Low_complexity 1 28 0 1 671 332 98 33 0 chrX 11367185 11367246 -11055581 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 1 671 192 40 0 0 chrX 11367519 11367544 -11055283 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 671 1150 246 3 3 chrX 11368554 11368860 -11053967 - SAR_DM Satellite Satellite -591 881 576 1 671 336 24 0 0 chrX 11370395 11370436 -11052391 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 671 244 182 15 15 chrX 11371186 11371253 -11051574 + (CATCC)n Simple_repeat Simple_repeat 5 71 0 1 671 185 206 0 60 chrX 11371358 11371425 -11051402 + (CAATC)n Simple_repeat Simple_repeat 5 67 0 1 671 345 136 0 0 chrX 11371545 11371611 -11051216 + (GA)n Simple_repeat Simple_repeat 2 67 0 1 671 236 306 20 10 chrX 11373226 11373325 -11049502 + (TAGA)n Simple_repeat Simple_repeat 1 100 0 1 671 200 177 32 0 chrX 11373400 11373462 -11049365 + (CATAC)n Simple_repeat Simple_repeat 5 68 0 1 671 294 87 0 0 chrX 11373684 11373730 -11049097 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 671 234 0 0 0 chrX 11374426 11374452 -11048375 + (GATTG)n Simple_repeat Simple_repeat 3 28 0 1 671 267 79 0 0 chrX 11374473 11374511 -11048316 + (CCGAA)n Simple_repeat Simple_repeat 3 40 0 1 671 207 0 0 0 chrX 11375011 11375034 -11047793 + (A)n Simple_repeat Simple_repeat 1 23 0 1 671 280 208 0 27 chrX 11375298 11375372 -11047455 + (CATCC)n Simple_repeat Simple_repeat 5 76 0 1 671 22 0 0 0 chrX 11376707 11376729 -11046098 + AT_rich Low_complexity Low_complexity 1 22 0 1 671 22 35 0 0 chrX 11377081 11377110 -11045717 + AT_rich Low_complexity Low_complexity 1 29 0 1 671 22 0 0 0 chrX 11379110 11379132 -11043695 + AT_rich Low_complexity Low_complexity 1 22 0 1 671 27 29 0 0 chrX 11385621 11385655 -11037172 + AT_rich Low_complexity Low_complexity 1 34 0 1 671 211 298 0 42 chrX 11389111 11389230 -11033597 + CT-rich Low_complexity Low_complexity 1 114 0 1 671 21 36 0 0 chrX 11390146 11390174 -11032653 + AT_rich Low_complexity Low_complexity 1 28 0 1 671 25 0 0 0 chrX 11390847 11390872 -11031955 + AT_rich Low_complexity Low_complexity 1 25 0 1 671 206 105 26 0 chrX 11391612 11391650 -11031177 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 671 21 0 0 0 chrX 11393330 11393351 -11029476 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 21 0 0 0 chrX 11395247 11395268 -11027559 + AT_rich Low_complexity Low_complexity 1 21 0 1 671 198 128 0 0 chrX 11396588 11396627 -11026200 + (CAGTT)n Simple_repeat Simple_repeat 2 40 0 1 671 230 193 17 34 chrX 11397119 11397178 -11025649 + A-rich Low_complexity Low_complexity 2 59 0 1 671 223 178 0 0 chrX 11397859 11397904 -11024923 + A-rich Low_complexity Low_complexity 1 45 0 1 671 210 118 0 0 chrX 11398764 11398798 -11024029 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 1 671 189 0 0 0 chrX 11400090 11400111 -11022716 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 671 234 62 0 0 chrX 11400475 11400507 -11022320 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 671 213 235 20 0 chrX 11401824 11401896 -11020931 + (CATTT)n Simple_repeat Simple_repeat 1 73 0 1 672 296 83 0 20 chrX 11403343 11403392 -11019435 + (ATG)n Simple_repeat Simple_repeat 2 49 0 1 672 240 122 0 0 chrX 11404461 11404502 -11018325 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 672 252 0 0 0 chrX 11404731 11404759 -11018068 + (AACTG)n Simple_repeat Simple_repeat 4 31 0 1 672 218 220 20 0 chrX 11405235 11405285 -11017542 + (CAT)n Simple_repeat Simple_repeat 2 52 0 1 672 232 254 0 0 chrX 11405545 11405612 -11017215 + (ATG)n Simple_repeat Simple_repeat 2 68 0 1 672 183 100 0 0 chrX 11406072 11406102 -11016725 + (A)n Simple_repeat Simple_repeat 1 30 0 1 672 29 28 0 0 chrX 11406995 11407031 -11015796 + AT_rich Low_complexity Low_complexity 1 36 0 1 672 180 0 0 0 chrX 11408828 11408848 -11013979 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 672 180 0 0 0 chrX 11409820 11409840 -11012987 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 672 219 146 0 0 chrX 11411460 11411501 -11011326 + (CCGAA)n Simple_repeat Simple_repeat 4 44 0 1 672 204 226 0 0 chrX 11411729 11411791 -11011036 + (ATG)n Simple_repeat Simple_repeat 3 64 0 1 672 210 164 15 62 chrX 11412247 11412312 -11010515 + T-rich Low_complexity Low_complexity 1 62 0 1 672 209 269 0 49 chrX 11414209 11414291 -11008536 + (CAA)n Simple_repeat Simple_repeat 1 78 0 1 672 243 61 0 0 chrX 11414431 11414464 -11008363 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 672 217 140 35 0 chrX 11415426 11415483 -11007344 + (CAA)n Simple_repeat Simple_repeat 2 60 0 1 672 21 36 0 0 chrX 11418822 11418850 -11003977 + AT_rich Low_complexity Low_complexity 1 28 0 1 672 224 226 0 16 chrX 11419008 11419071 -11003756 + T-rich Low_complexity Low_complexity 1 62 0 1 672 180 0 0 0 chrX 11420926 11420946 -11001881 + (TTTTTG)n Simple_repeat Simple_repeat 1 20 0 1 672 300 178 0 0 chrX 11421231 11421304 -11001523 + (TGAA)n Simple_repeat Simple_repeat 4 76 0 1 672 189 0 0 0 chrX 11423012 11423033 -10999794 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 672 206 232 0 0 chrX 11423369 11423425 -10999402 + A-rich Low_complexity Low_complexity 1 56 0 1 672 237 279 0 0 chrX 11425272 11425333 -10997494 + CT-rich Low_complexity Low_complexity 2 62 0 1 672 21 57 0 0 chrX 11425794 11425829 -10996998 + AT_rich Low_complexity Low_complexity 1 35 0 1 672 2605 224 14 24 chrX 11425847 11426605 -10996222 + SAR_DM Satellite Satellite 200 950 -522 1 672 198 0 0 0 chrX 11428077 11428099 -10994728 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 672 2425 4 0 4 chrX 11429128 11429404 -10993423 - BURDOCK_LTR LTR Gypsy 0 275 1 1 672 53064 2 0 0 chrX 11429405 11435265 -10987562 - BURDOCK_I LTR Gypsy 0 5860 1 1 672 2425 4 0 4 chrX 11435265 11435541 -10987286 - BURDOCK_LTR LTR Gypsy 0 275 1 1 672 35 0 0 0 chrX 11436843 11436878 -10985949 + AT_rich Low_complexity Low_complexity 1 35 0 1 672 180 0 0 0 chrX 11436973 11436993 -10985834 + (T)n Simple_repeat Simple_repeat 1 20 0 1 672 302 328 0 24 chrX 11438955 11439080 -10983747 + G-rich Low_complexity Low_complexity 1 122 0 1 672 233 183 0 53 chrX 11439259 11439334 -10983493 + A-rich Low_complexity Low_complexity 1 71 0 1 672 180 0 0 0 chrX 11439527 11439547 -10983280 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1 672 239 250 0 27 chrX 11440155 11440229 -10982598 + (TTTG)n Simple_repeat Simple_repeat 1 72 0 1 672 189 74 0 0 chrX 11440380 11440407 -10982420 + (A)n Simple_repeat Simple_repeat 1 27 0 1 672 201 74 0 0 chrX 11441649 11441676 -10981151 + (CAT)n Simple_repeat Simple_repeat 2 28 0 1 672 197 93 0 65 chrX 11442055 11442101 -10980726 + A-rich Low_complexity Low_complexity 1 43 0 1 672 30 0 0 0 chrX 11443501 11443531 -10979296 + AT_rich Low_complexity Low_complexity 1 30 0 1 672 336 161 0 0 chrX 11445901 11445982 -10976845 + GA-rich Low_complexity Low_complexity 2 82 0 1 672 213 159 0 0 chrX 11446864 11446908 -10975919 + (CACCAT)n Simple_repeat Simple_repeat 1 44 0 1 672 210 91 0 0 chrX 11447660 11447693 -10975134 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 672 241 135 19 19 chrX 11448007 11448060 -10974767 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 1 672 38 61 0 0 chrX 11449001 11449067 -10973760 + AT_rich Low_complexity Low_complexity 1 66 0 1 672 215 148 0 36 chrX 11451080 11451136 -10971691 + (TATG)n Simple_repeat Simple_repeat 2 55 0 1 672 216 0 0 0 chrX 11451226 11451250 -10971577 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 672 189 171 0 0 chrX 11451815 11451850 -10970977 + (CATATA)n Simple_repeat Simple_repeat 1 35 0 1 672 265 227 0 26 chrX 11451896 11451973 -10970854 + A-rich Low_complexity Low_complexity 1 75 0 1 672 208 135 0 0 chrX 11452443 11452480 -10970347 + (A)n Simple_repeat Simple_repeat 1 37 0 1 672 415 267 48 7 chrX 11452876 11453023 -10969804 - XDMR Unknown Unknown -208 153 1 1 672 3104 251 26 22 chrX 11452894 11453991 -10968836 + SAR_DM Satellite Satellite 1 1100 -242 1 672 1699 0 0 0 chrX 11465539 11465725 -10957102 + POGON1 DNA Pogo 1 186 0 1 672 191 32 0 61 chrX 11473968 11474001 -10948826 + (CAATA)n Simple_repeat Simple_repeat 3 33 0 1 672 191 170 0 21 chrX 11479984 11480032 -10942795 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 672 26 0 0 0 chrX 11481017 11481043 -10941784 + AT_rich Low_complexity Low_complexity 1 26 0 1 672 26 0 0 0 chrX 11483110 11483136 -10939691 + AT_rich Low_complexity Low_complexity 1 26 0 1 672 26 0 0 0 chrX 11485203 11485229 -10937598 + AT_rich Low_complexity Low_complexity 1 26 0 1 672 26 0 0 0 chrX 11487296 11487322 -10935505 + AT_rich Low_complexity Low_complexity 1 26 0 1 672 26 0 0 0 chrX 11489389 11489415 -10933412 + AT_rich Low_complexity Low_complexity 1 26 0 1 672 26 0 0 0 chrX 11491482 11491508 -10931319 + AT_rich Low_complexity Low_complexity 1 26 0 1 672 26 0 0 0 chrX 11493575 11493601 -10929226 + AT_rich Low_complexity Low_complexity 1 26 0 1 672 213 132 0 0 chrX 11499475 11499513 -10923314 + (CCCTAG)n Simple_repeat Simple_repeat 3 40 0 1 672 2202 33 54 14 chrX 11499722 11500000 -10922827 + DMTOM1_LTR LTR Gypsy 1 289 -121 1 672 734 37 109 9 chrX 11500000 11500110 -10922717 + DMTOM1_LTR LTR Gypsy 290 410 0 1 672 188 35 35 0 chrX 11505151 11505180 -10917647 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 672 28 0 0 0 chrX 11505847 11505875 -10916952 + AT_rich Low_complexity Low_complexity 1 28 0 1 672 189 147 0 0 chrX 11506994 11507028 -10915799 + (CCCGAA)n Simple_repeat Simple_repeat 2 35 0 1 672 34 42 0 0 chrX 11510001 11510049 -10912778 + AT_rich Low_complexity Low_complexity 1 48 0 1 672 201 154 0 0 chrX 11510330 11510369 -10912458 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1 672 229 216 0 0 chrX 11513970 11514021 -10908806 + A-rich Low_complexity Low_complexity 1 51 0 1 672 210 91 0 0 chrX 11514259 11514292 -10908535 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 672 25 0 0 0 chrX 11515319 11515344 -10907483 + AT_rich Low_complexity Low_complexity 1 25 0 1 672 21 0 0 0 chrX 11515583 11515604 -10907223 + AT_rich Low_complexity Low_complexity 1 21 0 1 672 198 71 0 0 chrX 11516438 11516466 -10906361 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 672 296 83 21 0 chrX 11516850 11516898 -10905929 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 672 222 62 0 0 chrX 11518714 11518746 -10904081 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 672 24 53 0 0 chrX 11521226 11521264 -10901563 + AT_rich Low_complexity Low_complexity 1 38 0 1 672 240 35 0 0 chrX 11521413 11521442 -10901385 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 672 24 0 0 0 chrX 11522103 11522127 -10900700 + AT_rich Low_complexity Low_complexity 1 24 0 1 672 198 0 0 0 chrX 11524026 11524048 -10898779 + (CCA)n Simple_repeat Simple_repeat 1 22 0 1 672 22 0 0 0 chrX 11526804 11526826 -10896001 + AT_rich Low_complexity Low_complexity 1 22 0 1 672 3368 5 7 7 chrX 11527504 11527918 -10894909 - DM297_LTR LTR Gypsy 0 414 1 1 672 51099 7 0 0 chrX 11527918 11534087 -10888740 - DM297_I LTR Gypsy 0 6167 1 1 10 3368 5 7 7 chrX 11534087 11534501 -10888326 - DM297_LTR LTR Gypsy 0 414 1 1 673 258 32 0 0 chrX 11536256 11536287 -10886540 + (ATG)n Simple_repeat Simple_repeat 1 31 0 1 673 186 43 0 0 chrX 11537724 11537747 -10885080 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 673 288 102 0 0 chrX 11538867 11538916 -10883911 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 673 12879 65 353 38 chrX 11539200 11542308 -10880519 + FB4_DM DNA Tc1 1 4089 0 1 673 31 76 0 0 chrX 11542382 11542448 -10880379 + AT_rich Low_complexity Low_complexity 1 66 0 1 673 282 167 0 0 chrX 11543142 11543202 -10879625 + (CATA)n Simple_repeat Simple_repeat 4 63 0 1 673 191 156 0 43 chrX 11546012 11546059 -10876768 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1 673 2025 242 25 13 chrX 11548926 11549605 -10873222 - SAR_DM Satellite Satellite -539 933 247 1 673 206 239 0 0 chrX 11550880 11550926 -10871901 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 673 278 67 0 22 chrX 11552453 11552499 -10870328 + (GAAAA)n Simple_repeat Simple_repeat 2 46 0 1 673 25 51 0 0 chrX 11552775 11552814 -10870013 + AT_rich Low_complexity Low_complexity 1 39 0 1 673 209 203 16 33 chrX 11554657 11554718 -10868109 + (TTTG)n Simple_repeat Simple_repeat 3 62 0 1 673 22 0 0 0 chrX 11554923 11554945 -10867882 + AT_rich Low_complexity Low_complexity 1 22 0 1 673 189 0 0 0 chrX 11555175 11555196 -10867631 + (TTA)n Simple_repeat Simple_repeat 3 23 0 1 673 223 146 18 18 chrX 11555454 11555510 -10867317 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 1 673 210 37 0 0 chrX 11556047 11556074 -10866753 + (A)n Simple_repeat Simple_repeat 1 27 0 1 673 183 42 0 0 chrX 11556452 11556476 -10866351 + (A)n Simple_repeat Simple_repeat 1 24 0 1 673 24 53 0 0 chrX 11559296 11559334 -10863493 + AT_rich Low_complexity Low_complexity 1 38 0 1 673 273 57 0 0 chrX 11568133 11568168 -10854659 + (CAG)n Simple_repeat Simple_repeat 3 37 0 1 673 195 69 0 0 chrX 11569479 11569508 -10853319 + (CAACC)n Simple_repeat Simple_repeat 2 30 0 1 673 24 53 0 0 chrX 11569707 11569745 -10853082 + AT_rich Low_complexity Low_complexity 1 38 0 1 673 27 0 0 0 chrX 11569960 11569987 -10852840 + AT_rich Low_complexity Low_complexity 1 27 0 1 673 35 63 0 0 chrX 11572682 11572745 -10850082 + AT_rich Low_complexity Low_complexity 1 63 0 1 673 180 77 0 0 chrX 11573764 11573790 -10849037 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 673 21 0 0 0 chrX 11574222 11574243 -10848584 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 288 130 0 0 chrX 11576286 11576332 -10846495 + (CAA)n Simple_repeat Simple_repeat 1 46 0 1 673 288 244 0 0 chrX 11577560 11577650 -10845177 + (CGA)n Simple_repeat Simple_repeat 1 90 0 1 673 180 0 0 0 chrX 11578374 11578394 -10844433 + (T)n Simple_repeat Simple_repeat 1 20 0 1 673 210 150 0 0 chrX 11578574 11578614 -10844213 + (T)n Simple_repeat Simple_repeat 1 40 0 1 673 239 191 15 0 chrX 11579500 11579568 -10843259 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 673 324 102 0 0 chrX 11580363 11580412 -10842415 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 673 209 182 0 0 chrX 11581922 11581955 -10840872 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 673 180 0 0 0 chrX 11582054 11582074 -10840753 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 673 345 47 0 0 chrX 11583619 11583662 -10839165 + (TTA)n Simple_repeat Simple_repeat 2 44 0 1 673 309 314 0 22 chrX 11583735 11583872 -10838955 + (TCTCTG)n Simple_repeat Simple_repeat 5 138 0 1 673 231 229 11 57 chrX 11584889 11584977 -10837850 + ROO_I LTR Pao 651 734 -7522 1 673 22 35 0 0 chrX 11585644 11585673 -10837154 + AT_rich Low_complexity Low_complexity 1 29 0 1 673 207 69 0 0 chrX 11587416 11587445 -10835382 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 673 206 286 0 0 chrX 11587671 11587727 -10835100 + (CAG)n Simple_repeat Simple_repeat 2 57 0 1 673 35 54 0 0 chrX 11588292 11588348 -10834479 + AT_rich Low_complexity Low_complexity 1 56 0 1 673 187 190 17 17 chrX 11589417 11589476 -10833351 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 673 194 0 39 0 chrX 11589747 11589773 -10833054 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 673 22 70 0 0 chrX 11589780 11589823 -10833004 + AT_rich Low_complexity Low_complexity 1 43 0 1 673 192 77 0 0 chrX 11589987 11590013 -10832814 + (AACTG)n Simple_repeat Simple_repeat 4 29 0 1 673 236 233 17 0 chrX 11590013 11590073 -10832754 + (CGAAA)n Simple_repeat Simple_repeat 5 65 0 1 673 23 0 0 0 chrX 11591927 11591950 -10830877 + AT_rich Low_complexity Low_complexity 1 23 0 1 673 195 139 0 0 chrX 11592669 11592705 -10830122 + (CCA)n Simple_repeat Simple_repeat 2 37 0 1 673 186 43 0 0 chrX 11593942 11593965 -10828862 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 673 274 145 14 14 chrX 11595005 11595075 -10827752 + ROO_I LTR Pao 675 744 -7512 1 673 23 0 0 0 chrX 11595488 11595511 -10827316 + AT_rich Low_complexity Low_complexity 1 23 0 1 673 186 133 0 0 chrX 11595901 11595931 -10826896 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1 673 231 189 0 0 chrX 11596682 11596735 -10826092 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 673 303 71 0 0 chrX 11597271 11597313 -10825514 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 673 207 69 0 0 chrX 11597745 11597774 -10825053 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 673 222 172 35 0 chrX 11597774 11597832 -10824995 + GA-rich Low_complexity Low_complexity 1 60 0 1 673 201 147 0 0 chrX 11597975 11598009 -10824818 + (TATG)n Simple_repeat Simple_repeat 1 34 0 1 673 208 241 0 0 chrX 11598410 11598468 -10824359 + A-rich Low_complexity Low_complexity 1 58 0 1 673 525 212 59 7 chrX 11599993 11600145 -10822682 - SAR_DM Satellite Satellite -357 1115 956 1 673 183 42 0 0 chrX 11600151 11600175 -10822652 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 673 200 159 22 22 chrX 11600567 11600612 -10822215 + T-rich Low_complexity Low_complexity 3 47 0 1 673 202 143 24 0 chrX 11600671 11600713 -10822114 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 673 29 90 0 0 chrX 11604440 11604518 -10818309 + AT_rich Low_complexity Low_complexity 1 78 0 1 673 21 0 0 0 chrX 11604735 11604756 -10818071 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 218 207 11 58 chrX 11604775 11604862 -10817965 + T-rich Low_complexity Low_complexity 2 84 0 1 673 376 67 33 0 chrX 11605274 11605334 -10817493 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 673 219 161 0 0 chrX 11605795 11605851 -10816976 + CT-rich Low_complexity Low_complexity 2 57 0 1 673 332 306 6 6 chrX 11608217 11608378 -10814449 + (CA)n Simple_repeat Simple_repeat 1 161 0 1 673 259 188 40 50 chrX 11608647 11608748 -10814079 + (CTGTG)n Simple_repeat Simple_repeat 3 102 0 1 673 195 225 0 0 chrX 11614771 11614842 -10807985 + (TGG)n Simple_repeat Simple_repeat 1 71 0 1 673 216 184 0 0 chrX 11618908 11618957 -10803870 + CT-rich Low_complexity Low_complexity 2 50 0 1 673 236 91 23 0 chrX 11619875 11619919 -10802908 + (GATTG)n Simple_repeat Simple_repeat 4 48 0 1 673 189 0 0 0 chrX 11620502 11620523 -10802304 + (A)n Simple_repeat Simple_repeat 1 21 0 1 673 231 36 0 0 chrX 11624093 11624121 -10798706 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 673 225 186 0 0 chrX 11633835 11633878 -10788949 + GA-rich Low_complexity Low_complexity 2 44 0 1 673 28 0 0 0 chrX 11634290 11634318 -10788509 + AT_rich Low_complexity Low_complexity 1 28 0 1 673 255 103 0 0 chrX 11634674 11634713 -10788114 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1 673 249 83 0 0 chrX 11634809 11634845 -10787982 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 673 194 183 0 14 chrX 11634911 11634983 -10787844 + (CTG)n Simple_repeat Simple_repeat 1 71 0 1 673 21 36 0 0 chrX 11635158 11635186 -10787641 + AT_rich Low_complexity Low_complexity 1 28 0 1 673 3994 2 0 0 chrX 11637654 11638082 -10784745 + ROO_LTR LTR Pao 1 428 0 1 673 51853 1 0 0 chrX 11638082 11643794 -10779033 + ROO_I LTR Pao 1 5711 -2545 1 673 8900 0 0 0 chrX 11643786 11644753 -10778074 + ROO_I LTR Pao 7039 8005 -251 1 673 225 186 0 0 chrX 11647103 11647146 -10775681 + GA-rich Low_complexity Low_complexity 2 44 0 1 673 28 0 0 0 chrX 11647558 11647586 -10775241 + AT_rich Low_complexity Low_complexity 1 28 0 1 673 255 103 0 0 chrX 11647942 11647981 -10774846 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1 673 249 83 0 0 chrX 11648077 11648113 -10774714 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 673 194 183 0 14 chrX 11648179 11648251 -10774576 + (CTG)n Simple_repeat Simple_repeat 1 71 0 1 673 21 36 0 0 chrX 11648426 11648454 -10774373 + AT_rich Low_complexity Low_complexity 1 28 0 1 673 2140 229 50 29 chrX 11651367 11652080 -10770747 - SAR_DM Satellite Satellite -506 728 1 1 673 200 262 0 32 chrX 11652794 11652857 -10769970 + (GTATG)n Simple_repeat Simple_repeat 5 65 0 1 673 216 0 0 0 chrX 11653914 11653938 -10768889 + (T)n Simple_repeat Simple_repeat 1 24 0 1 673 212 122 0 24 chrX 11654209 11654251 -10768576 + (TTAG)n Simple_repeat Simple_repeat 4 44 0 1 673 207 196 0 0 chrX 11654751 11654797 -10768030 + T-rich Low_complexity Low_complexity 1 46 0 1 673 186 43 0 0 chrX 11655023 11655046 -10767781 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 673 213 196 0 0 chrX 11655089 11655135 -10767692 + (ACTG)n Simple_repeat Simple_repeat 1 46 0 1 673 269 268 0 27 chrX 11655529 11655602 -10767225 + (CCCCAA)n Simple_repeat Simple_repeat 1 71 0 1 673 203 169 0 48 chrX 11656048 11656110 -10766717 + A-rich Low_complexity Low_complexity 1 59 0 1 673 203 176 0 0 chrX 11656171 11656205 -10766622 + (ATG)n Simple_repeat Simple_repeat 1 34 0 1 673 231 88 0 0 chrX 11657548 11657582 -10765245 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 673 21 0 0 0 chrX 11657582 11657603 -10765224 + AT_rich Low_complexity Low_complexity 1 21 0 1 673 201 74 0 0 chrX 11658558 11658585 -10764242 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 673 204 125 0 0 chrX 11662063 11662095 -10760732 + (GGA)n Simple_repeat Simple_repeat 3 34 0 1 673 327 104 0 0 chrX 11662532 11662580 -10760247 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1 673 26 50 0 0 chrX 11662761 11662801 -10760026 + AT_rich Low_complexity Low_complexity 1 40 0 1 673 220 136 0 22 chrX 11663148 11663193 -10759634 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 673 231 213 16 0 chrX 11663341 11663402 -10759425 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 673 270 250 24 36 chrX 11664082 11664165 -10758662 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 674 338 82 0 47 chrX 11666414 11666478 -10756349 + (CTG)n Simple_repeat Simple_repeat 3 63 0 1 674 441 141 0 0 chrX 11666835 11666920 -10755907 + (CTG)n Simple_repeat Simple_repeat 2 86 0 1 674 32 26 0 0 chrX 11667845 11667884 -10754943 + AT_rich Low_complexity Low_complexity 1 39 0 1 674 205 204 0 20 chrX 11668518 11668568 -10754259 + T-rich Low_complexity Low_complexity 3 51 0 1 674 207 88 0 0 chrX 11669258 11669292 -10753535 + (T)n Simple_repeat Simple_repeat 1 34 0 1 674 300 272 0 0 chrX 11670154 11670235 -10752592 + (CATTC)n Simple_repeat Simple_repeat 1 81 0 1 674 378 136 62 0 chrX 11670794 11670875 -10751952 - ROO_I LTR Pao -7527 729 644 1 674 374 171 37 0 chrX 11672246 11672328 -10750499 - ROO_I LTR Pao -7513 743 659 1 674 217 159 0 22 chrX 11672434 11672479 -10750348 + A-rich Low_complexity Low_complexity 2 45 0 1 674 220 104 62 0 chrX 11672559 11672607 -10750220 + T-rich Low_complexity Low_complexity 2 52 0 1 674 213 39 0 0 chrX 11672856 11672882 -10749945 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1 674 306 141 0 89 chrX 11673031 11673132 -10749695 - ROO_I LTR Pao -7517 739 648 1 674 229 248 38 38 chrX 11673161 11673266 -10749561 - ROO_I LTR Pao -7505 751 647 1 674 198 71 0 0 chrX 11673334 11673362 -10749465 + (TATG)n Simple_repeat Simple_repeat 3 30 0 1 674 528 247 12 19 chrX 11674013 11674174 -10748653 - XDMR Unknown Unknown -201 160 1 1 674 3630 229 20 20 chrX 11674065 11675792 -10747035 + SAR_DM Satellite Satellite 1 1727 -255 1 674 870 244 15 7 chrX 11675567 11675839 -10746988 - XDMR_DM Unknown Unknown 0 360 87 1 674 26 0 0 0 chrX 11675926 11675952 -10746875 + AT_rich Low_complexity Low_complexity 1 26 0 1 674 243 190 0 0 chrX 11676760 11676818 -10746009 + T-rich Low_complexity Low_complexity 1 58 0 1 674 244 194 16 16 chrX 11676989 11677052 -10745775 - Stalker2_LTR LTR Gypsy -135 289 227 1 674 339 157 0 33 chrX 11677201 11677293 -10745534 + (CTG)n Simple_repeat Simple_repeat 1 89 0 1 674 201 152 0 0 chrX 11677969 11678002 -10744825 + (AAATG)n Simple_repeat Simple_repeat 3 35 0 1 674 250 246 0 15 chrX 11678093 11678159 -10744668 + (ATTCG)n Simple_repeat Simple_repeat 1 65 0 1 674 216 0 0 0 chrX 11678398 11678422 -10744405 + (A)n Simple_repeat Simple_repeat 1 24 0 1 674 189 74 0 0 chrX 11679210 11679237 -10743590 + (A)n Simple_repeat Simple_repeat 1 27 0 1 674 217 228 0 17 chrX 11681328 11681386 -10741441 + GA-rich Low_complexity Low_complexity 1 57 0 1 674 22 0 0 0 chrX 11682406 11682428 -10740399 + AT_rich Low_complexity Low_complexity 1 22 0 1 674 221 183 0 16 chrX 11683956 11684017 -10738810 + CT-rich Low_complexity Low_complexity 3 62 0 1 674 204 259 24 12 chrX 11687322 11687404 -10735423 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 674 222 37 0 0 chrX 11687683 11687710 -10735117 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 674 21 36 0 0 chrX 11689374 11689402 -10733425 + AT_rich Low_complexity Low_complexity 1 28 0 1 674 204 143 30 60 chrX 11689418 11689485 -10733342 + (CAAAC)n Simple_repeat Simple_repeat 1 65 0 1 674 209 33 0 32 chrX 11689786 11689817 -10733010 + (CAA)n Simple_repeat Simple_repeat 3 32 0 1 674 21 36 0 0 chrX 11689879 11689907 -10732920 + AT_rich Low_complexity Low_complexity 1 28 0 1 674 203 296 0 0 chrX 11690213 11690267 -10732560 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 674 204 143 0 0 chrX 11690440 11690482 -10732345 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 674 235 275 0 0 chrX 11691024 11691093 -10731734 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 674 213 65 0 0 chrX 11691746 11691777 -10731050 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 674 218 233 11 75 chrX 11691868 11691961 -10730866 + A-rich Low_complexity Low_complexity 3 89 0 1 674 210 91 0 0 chrX 11693101 11693134 -10729693 + (AATAG)n Simple_repeat Simple_repeat 3 35 0 1 674 248 246 0 0 chrX 11694128 11694189 -10728638 + (CATA)n Simple_repeat Simple_repeat 2 62 0 1 674 203 152 0 0 chrX 11694292 11694325 -10728502 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 674 206 105 0 50 chrX 11695041 11695081 -10727746 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 1 674 202 132 38 0 chrX 11695112 11695165 -10727662 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 674 202 271 59 0 chrX 11695309 11695394 -10727433 + A-rich Low_complexity Low_complexity 1 90 0 1 674 21 82 0 0 chrX 11695394 11695443 -10727384 + AT_rich Low_complexity Low_complexity 1 49 0 1 674 39 22 0 0 chrX 11695724 11695770 -10727057 + AT_rich Low_complexity Low_complexity 1 46 0 1 674 198 0 0 0 chrX 11696502 11696524 -10726303 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1 674 28 29 0 0 chrX 11700742 11700777 -10722050 + AT_rich Low_complexity Low_complexity 1 35 0 1 674 29 0 0 0 chrX 11701314 11701343 -10721484 + AT_rich Low_complexity Low_complexity 1 29 0 1 674 25 90 0 0 chrX 11701388 11701455 -10721372 + AT_rich Low_complexity Low_complexity 1 67 0 1 674 31 26 0 0 chrX 11702066 11702104 -10720723 + AT_rich Low_complexity Low_complexity 1 38 0 1 674 32 43 0 0 chrX 11702185 11702231 -10720596 + AT_rich Low_complexity Low_complexity 1 46 0 1 674 26 0 0 0 chrX 11702814 11702840 -10719987 + AT_rich Low_complexity Low_complexity 1 26 0 1 674 327 104 0 0 chrX 11703082 11703130 -10719697 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 674 214 194 0 46 chrX 11703346 11703411 -10719416 + T-rich Low_complexity Low_complexity 4 65 0 1 674 243 103 0 0 chrX 11703901 11703940 -10718887 + (CAT)n Simple_repeat Simple_repeat 2 40 0 1 674 198 180 0 0 chrX 11705807 11705868 -10716959 + CT-rich Low_complexity Low_complexity 1 61 0 1 674 222 37 0 0 chrX 11708517 11708544 -10714283 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 674 222 91 0 0 chrX 11709367 11709400 -10713427 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 674 183 42 0 0 chrX 11710286 11710310 -10712517 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 674 23 54 0 0 chrX 11710646 11710683 -10712144 + AT_rich Low_complexity Low_complexity 1 37 0 1 674 189 154 0 0 chrX 11711159 11711198 -10711629 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 674 275 242 0 15 chrX 11711265 11711332 -10711495 + (CAA)n Simple_repeat Simple_repeat 1 66 0 1 674 908 235 99 36 chrX 11716445 11716860 -10705967 - SAR_DM Satellite Satellite -466 1006 566 1 674 28 61 0 0 chrX 11721357 11721406 -10701421 + AT_rich Low_complexity Low_complexity 1 49 0 1 674 220 93 21 85 chrX 11721532 11721579 -10701248 + (ATG)n Simple_repeat Simple_repeat 1 44 0 1 674 183 129 0 0 chrX 11721692 11721723 -10701104 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 674 259 281 10 10 chrX 11722806 11722903 -10699924 + GA-rich Low_complexity Low_complexity 1 97 0 1 674 213 121 0 0 chrX 11724212 11724245 -10698582 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 674 262 253 0 65 chrX 11724815 11724908 -10697919 + GA-rich Low_complexity Low_complexity 2 88 0 1 674 519 264 0 53 chrX 11724965 11725153 -10697674 + GA-rich Low_complexity Low_complexity 3 180 0 1 674 472 273 0 49 chrX 11725115 11725364 -10697463 + A-rich Low_complexity Low_complexity 1 236 0 1 674 422 269 9 64 chrX 11725292 11725679 -10697148 + GA-rich Low_complexity Low_complexity 1 365 0 1 674 213 139 0 0 chrX 11727056 11727099 -10695728 + (CAG)n Simple_repeat Simple_repeat 1 43 0 1 674 226 161 0 51 chrX 11727389 11727448 -10695379 + A-rich Low_complexity Low_complexity 5 60 0 1 674 238 67 0 43 chrX 11727513 11727560 -10695267 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1 674 346 127 14 14 chrX 11727694 11727766 -10695061 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 674 347 0 0 23 chrX 11727889 11727933 -10694894 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 674 224 316 0 0 chrX 11728238 11728336 -10694491 + T-rich Low_complexity Low_complexity 1 98 0 1 674 21 0 0 0 chrX 11728483 11728504 -10694323 + AT_rich Low_complexity Low_complexity 1 21 0 1 674 273 89 0 0 chrX 11729200 11729245 -10693582 + (GGA)n Simple_repeat Simple_repeat 2 46 0 1 674 393 109 0 0 chrX 11729927 11729991 -10692836 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 674 201 154 0 0 chrX 11730523 11730562 -10692265 + A-rich Low_complexity Low_complexity 1 39 0 1 674 21 36 0 0 chrX 11730597 11730625 -10692202 + AT_rich Low_complexity Low_complexity 1 28 0 1 674 207 100 0 0 chrX 11730824 11730854 -10691973 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 674 366 115 0 0 chrX 11731056 11731117 -10691710 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 674 29 0 0 0 chrX 11731450 11731479 -10691348 + AT_rich Low_complexity Low_complexity 1 29 0 1 674 204 277 0 0 chrX 11731663 11731728 -10691099 + CT-rich Low_complexity Low_complexity 2 66 0 1 674 272 292 0 0 chrX 11731882 11731988 -10690839 + GA-rich Low_complexity Low_complexity 1 106 0 1 674 26 50 0 0 chrX 11732452 11732492 -10690335 + AT_rich Low_complexity Low_complexity 1 40 0 1 674 495 0 0 0 chrX 11732758 11732813 -10690014 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 1 674 22 0 0 0 chrX 11735595 11735617 -10687210 + AT_rich Low_complexity Low_complexity 1 22 0 1 674 26 0 0 0 chrX 11736874 11736900 -10685927 + AT_rich Low_complexity Low_complexity 1 26 0 1 674 225 238 0 0 chrX 11737613 11737676 -10685151 + (CTG)n Simple_repeat Simple_repeat 1 63 0 1 674 264 301 7 7 chrX 11737826 11737973 -10684854 + (CAG)n Simple_repeat Simple_repeat 2 148 0 1 674 256 346 0 0 chrX 11738055 11738162 -10684665 + (CTGGGG)n Simple_repeat Simple_repeat 6 112 0 1 674 296 246 72 24 chrX 11738307 11738432 -10684395 - TART_B1 LINE telomeric -10429 225 95 1 674 366 141 0 89 chrX 11738337 11738438 -10684389 - ROO_I LTR Pao -7524 732 641 1 674 229 265 0 0 chrX 11738579 11738647 -10684180 - ROO_I LTR Pao -7538 718 651 1 674 343 214 28 28 chrX 11738644 11738750 -10684077 - ROO_I LTR Pao -7513 743 638 1 674 258 179 0 167 chrX 11738996 11739110 -10683717 - ROO_I LTR Pao -7509 747 653 1 674 263 111 0 189 chrX 11739290 11739401 -10683426 - ROO_I LTR Pao -7523 733 644 1 674 270 116 0 0 chrX 11739784 11739827 -10683000 + (CTG)n Simple_repeat Simple_repeat 1 43 0 1 674 626 80 85 57 chrX 11740580 11740686 -10682141 - DMRP1 Unknown Unknown -229 117 9 1 674 228 149 0 0 chrX 11741042 11741089 -10681738 + (TTTTTA)n Simple_repeat Simple_repeat 2 48 0 1 674 201 74 0 0 chrX 11741787 11741814 -10681013 + (AATTG)n Simple_repeat Simple_repeat 4 30 0 1 674 180 214 0 0 chrX 11742520 11742576 -10680251 + CT-rich Low_complexity Low_complexity 1 56 0 1 674 23 0 0 0 chrX 11742895 11742918 -10679909 + AT_rich Low_complexity Low_complexity 1 23 0 1 674 23 68 0 0 chrX 11743107 11743151 -10679676 + AT_rich Low_complexity Low_complexity 1 44 0 1 674 217 151 57 0 chrX 11743156 11743209 -10679618 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 674 22 56 0 0 chrX 11744905 11744941 -10677886 + AT_rich Low_complexity Low_complexity 1 36 0 1 674 54 40 0 0 chrX 11746737 11746812 -10676015 + AT_rich Low_complexity Low_complexity 1 75 0 1 674 218 210 48 0 chrX 11751480 11751542 -10671285 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 674 23 78 0 0 chrX 11758334 11758385 -10664442 + AT_rich Low_complexity Low_complexity 1 51 0 1 674 315 182 0 0 chrX 11759336 11759413 -10663414 + CT-rich Low_complexity Low_complexity 2 78 0 1 674 203 162 0 26 chrX 11776219 11776257 -10646570 + (CCGAA)n Simple_repeat Simple_repeat 3 39 0 1 674 207 69 0 0 chrX 11777719 11777748 -10645079 + (AGTTG)n Simple_repeat Simple_repeat 4 32 0 1 674 285 128 0 0 chrX 11779376 11779423 -10643404 + (CAGC)n Simple_repeat Simple_repeat 3 49 0 1 674 23 0 0 0 chrX 11780258 11780281 -10642546 + AT_rich Low_complexity Low_complexity 1 23 0 1 674 276 188 0 0 chrX 11780713 11780777 -10642050 + (ATG)n Simple_repeat Simple_repeat 1 64 0 1 674 192 125 0 0 chrX 11781751 11781783 -10641044 + (CGG)n Simple_repeat Simple_repeat 2 33 0 1 674 321 176 0 0 chrX 11782836 11782910 -10639917 + (CGG)n Simple_repeat Simple_repeat 2 75 0 1 674 609 112 8 25 chrX 11783261 11783380 -10639447 + XDMR Unknown Unknown 245 361 0 1 674 1489 240 38 43 chrX 11783290 11783380 -10639447 - SAR_DM Satellite Satellite -668 804 597 1 674 2762 56 3 0 chrX 11783380 11783740 -10639087 + XDMR Unknown Unknown 1 361 0 1 674 2731 61 3 0 chrX 11783740 11784100 -10638727 + XDMR Unknown Unknown 1 361 0 1 674 1489 240 38 43 chrX 11783740 11783917 -10638910 - SAR_DM Satellite Satellite -668 596 181 1 674 2771 56 3 0 chrX 11784100 11784460 -10638367 + XDMR Unknown Unknown 1 361 0 1 674 2731 61 3 0 chrX 11784460 11784820 -10638007 + XDMR Unknown Unknown 1 361 0 1 674 2077 261 39 54 chrX 11784605 11784820 -10638007 - SAR_DM Satellite Satellite -193 1279 681 1 674 2777 56 3 0 chrX 11784820 11785180 -10637647 + XDMR Unknown Unknown 1 361 0 1 674 2496 86 3 11 chrX 11785180 11785544 -10637283 + XDMR Unknown Unknown 1 361 0 1 674 1768 75 4 0 chrX 11785544 11785785 -10637042 + XDMR Unknown Unknown 1 242 -119 1 674 2077 261 39 54 chrX 11785544 11785721 -10637106 - SAR_DM Satellite Satellite -193 680 181 1 674 234 276 0 0 chrX 11788568 11788666 -10634161 + A-rich Low_complexity Low_complexity 1 98 0 1 674 297 263 10 10 chrX 11789028 11789199 -10633628 + (CAA)n Simple_repeat Simple_repeat 1 171 0 1 674 313 182 0 0 chrX 11789339 11789427 -10633400 + ROO_I LTR Pao 651 738 -7518 1 674 295 272 21 21 chrX 11789432 11789526 -10633301 + ROO_I LTR Pao 651 744 -7512 1 674 227 272 0 24 chrX 11789916 11789999 -10632828 + ROO_I LTR Pao 641 721 -7535 1 674 251 330 0 38 chrX 11790145 11790331 -10632496 + (CAG)n Simple_repeat Simple_repeat 1 179 0 1 674 180 0 0 0 chrX 11791055 11791075 -10631752 + (CAG)n Simple_repeat Simple_repeat 1 20 0 1 674 258 217 36 12 chrX 11794418 11794502 -10628325 + T-rich Low_complexity Low_complexity 5 90 0 1 675 24 32 0 0 chrX 11799790 11799821 -10623006 + AT_rich Low_complexity Low_complexity 1 31 0 1 675 2732 107 148 0 chrX 11799898 11800358 -10622469 + DNAREP1_DM LINE Penelope 1 528 -66 1 675 23 0 0 0 chrX 11801453 11801476 -10621351 + AT_rich Low_complexity Low_complexity 1 23 0 1 675 29 0 0 0 chrX 11802310 11802339 -10620488 + AT_rich Low_complexity Low_complexity 1 29 0 1 675 25 31 0 0 chrX 11806609 11806641 -10616186 + AT_rich Low_complexity Low_complexity 1 32 0 1 675 298 61 0 70 chrX 11807618 11807689 -10615138 + (CAAAG)n Simple_repeat Simple_repeat 1 66 0 1 675 204 231 0 0 chrX 11808851 11808890 -10613937 + (TATATG)n Simple_repeat Simple_repeat 5 43 0 1 675 28 0 0 0 chrX 11809314 11809342 -10613485 + AT_rich Low_complexity Low_complexity 1 28 0 1 675 21 0 0 0 chrX 11813849 11813870 -10608957 + AT_rich Low_complexity Low_complexity 1 21 0 1 675 247 122 0 24 chrX 11814613 11814655 -10608172 + XDMR Unknown Unknown 72 112 -249 1 675 481 202 70 0 chrX 11814656 11814770 -10608057 + XDMR_DM Unknown Unknown 218 339 -21 1 675 275 279 137 17 chrX 11814667 11814842 -10607985 - SAR_DM Satellite Satellite -654 818 623 1 675 25 0 0 0 chrX 11815680 11815705 -10607122 + AT_rich Low_complexity Low_complexity 1 25 0 1 675 234 62 0 0 chrX 11816746 11816778 -10606049 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 675 186 43 0 0 chrX 11817862 11817885 -10604942 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 675 180 0 0 0 chrX 11819326 11819346 -10603481 + (GA)n Simple_repeat Simple_repeat 1 20 0 1 675 204 97 0 0 chrX 11820990 11821021 -10601806 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 675 453 237 0 0 chrX 11822525 11822643 -10600184 + CT-rich Low_complexity Low_complexity 1 118 0 1 675 26 0 0 0 chrX 11823612 11823638 -10599189 + AT_rich Low_complexity Low_complexity 1 26 0 1 675 206 232 0 0 chrX 11825307 11825363 -10597464 + T-rich Low_complexity Low_complexity 1 56 0 1 675 27 29 0 0 chrX 11825573 11825607 -10597220 + AT_rich Low_complexity Low_complexity 1 34 0 1 675 292 250 0 0 chrX 11825804 11825884 -10596943 + T-rich Low_complexity Low_complexity 1 80 0 1 675 285 177 0 0 chrX 11826634 11826713 -10596114 + T-rich Low_complexity Low_complexity 1 79 0 1 675 219 36 0 0 chrX 11826997 11827025 -10595802 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 675 189 0 0 0 chrX 11827139 11827160 -10595667 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 675 23 33 0 0 chrX 11827300 11827330 -10595497 + AT_rich Low_complexity Low_complexity 1 30 0 1 675 30 0 0 0 chrX 11832042 11832072 -10590755 + AT_rich Low_complexity Low_complexity 1 30 0 1 675 384 103 0 0 chrX 11832601 11832659 -10590168 + (ATTG)n Simple_repeat Simple_repeat 1 58 0 1 675 255 114 0 0 chrX 11833260 11833304 -10589523 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 675 25 51 0 0 chrX 11833375 11833414 -10589413 + AT_rich Low_complexity Low_complexity 1 39 0 1 675 180 0 0 0 chrX 11836625 11836645 -10586182 + (T)n Simple_repeat Simple_repeat 1 20 0 1 675 314 129 0 16 chrX 11836750 11836813 -10586014 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 675 22 56 0 0 chrX 11837034 11837070 -10585757 + AT_rich Low_complexity Low_complexity 1 36 0 1 675 25 0 0 0 chrX 11838244 11838269 -10584558 + AT_rich Low_complexity Low_complexity 1 25 0 1 675 299 89 0 18 chrX 11838410 11838467 -10584360 + (TTTTTG)n Simple_repeat Simple_repeat 2 57 0 1 675 200 224 20 0 chrX 11838573 11838622 -10584205 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 1 675 219 146 0 0 chrX 11838898 11838939 -10583888 + (TTA)n Simple_repeat Simple_repeat 3 43 0 1 675 27 0 0 0 chrX 11839325 11839352 -10583475 + AT_rich Low_complexity Low_complexity 1 27 0 1 675 21 0 0 0 chrX 11839861 11839882 -10582945 + AT_rich Low_complexity Low_complexity 1 21 0 1 675 257 51 0 25 chrX 11844531 11844571 -10578256 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 1 675 23 0 0 0 chrX 11846444 11846467 -10576360 + AT_rich Low_complexity Low_complexity 1 23 0 1 675 25 0 0 0 chrX 11847413 11847438 -10575389 + AT_rich Low_complexity Low_complexity 1 25 0 1 675 204 209 16 80 chrX 11848574 11848761 -10574066 + (TAG)n Simple_repeat Simple_repeat 1 175 0 1 675 21 71 0 0 chrX 11849245 11849287 -10573540 + AT_rich Low_complexity Low_complexity 1 42 0 1 675 198 71 0 0 chrX 11849775 11849803 -10573024 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 675 180 77 0 0 chrX 11850605 11850631 -10572196 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 675 186 143 0 0 chrX 11851053 11851088 -10571739 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 675 197 135 0 19 chrX 11851127 11851180 -10571647 + (TTG)n Simple_repeat Simple_repeat 1 52 0 1 675 222 200 0 35 chrX 11851451 11851508 -10571319 + T-rich Low_complexity Low_complexity 1 55 0 1 675 275 174 71 65 chrX 11854349 11854503 -10568324 + (ATTTG)n Simple_repeat Simple_repeat 2 156 0 1 675 21 36 0 0 chrX 11854557 11854585 -10568242 + AT_rich Low_complexity Low_complexity 1 28 0 1 675 245 162 0 14 chrX 11854760 11854829 -10567998 + (TTG)n Simple_repeat Simple_repeat 2 69 0 1 675 36 23 0 0 chrX 11855079 11855122 -10567705 + AT_rich Low_complexity Low_complexity 1 43 0 1 675 26 0 0 0 chrX 11855682 11855708 -10567119 + AT_rich Low_complexity Low_complexity 1 26 0 1 675 204 40 0 0 chrX 11858971 11858996 -10563831 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 675 24 0 0 0 chrX 11859557 11859581 -10563246 + AT_rich Low_complexity Low_complexity 1 24 0 1 675 36 0 0 0 chrX 11860385 11860421 -10562406 + AT_rich Low_complexity Low_complexity 1 36 0 1 675 24 53 0 0 chrX 11860887 11860925 -10561902 + AT_rich Low_complexity Low_complexity 1 38 0 1 675 195 100 0 0 chrX 11861122 11861152 -10561675 + (T)n Simple_repeat Simple_repeat 1 30 0 1 675 28 0 0 0 chrX 11863337 11863365 -10559462 + AT_rich Low_complexity Low_complexity 1 28 0 1 675 201 147 0 0 chrX 11864429 11864463 -10558364 + (TCC)n Simple_repeat Simple_repeat 3 36 0 1 675 22 0 0 0 chrX 11867988 11868010 -10554817 + AT_rich Low_complexity Low_complexity 1 22 0 1 675 225 312 15 23 chrX 11868089 11868220 -10554607 + (TATG)n Simple_repeat Simple_repeat 2 131 0 1 675 213 65 0 0 chrX 11870299 11870330 -10552497 + (T)n Simple_repeat Simple_repeat 1 31 0 1 675 23 54 0 0 chrX 11871786 11871823 -10551004 + AT_rich Low_complexity Low_complexity 1 37 0 1 675 21 36 0 0 chrX 11872826 11872854 -10549973 + AT_rich Low_complexity Low_complexity 1 28 0 1 675 25 0 0 0 chrX 11874562 11874587 -10548240 + AT_rich Low_complexity Low_complexity 1 25 0 1 675 192 125 0 0 chrX 11876084 11876116 -10546711 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 675 386 90 30 0 chrX 11877195 11877262 -10545565 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 1 675 27 49 0 0 chrX 11878653 11878694 -10544133 + AT_rich Low_complexity Low_complexity 1 41 0 1 675 472 249 108 14 chrX 11883399 11883611 -10539216 + XDMR Unknown Unknown 114 345 -16 1 675 1308 244 80 29 chrX 11883478 11884091 -10538736 - SAR_DM Satellite Satellite -255 1217 574 1 675 25 0 0 0 chrX 11884164 11884189 -10538638 + AT_rich Low_complexity Low_complexity 1 25 0 1 675 230 159 0 64 chrX 11884398 11884445 -10538382 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 1 675 426 53 0 0 chrX 11887220 11887277 -10535550 + (TAA)n Simple_repeat Simple_repeat 3 59 0 1 675 21 57 0 0 chrX 11889408 11889443 -10533384 + AT_rich Low_complexity Low_complexity 1 35 0 1 675 200 114 0 28 chrX 11892537 11892573 -10530254 + (CAAAAA)n Simple_repeat Simple_repeat 4 38 0 1 675 24 0 0 0 chrX 11893044 11893068 -10529759 + AT_rich Low_complexity Low_complexity 1 24 0 1 675 25 0 0 0 chrX 11893225 11893250 -10529577 + AT_rich Low_complexity Low_complexity 1 25 0 1 675 189 0 0 0 chrX 11893621 11893642 -10529185 + (CAAGC)n Simple_repeat Simple_repeat 4 24 0 1 675 219 152 0 0 chrX 11894176 11894222 -10528605 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 1 675 244 237 0 0 chrX 11896684 11896743 -10526084 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 675 195 100 0 0 chrX 11896919 11896949 -10525878 + (GTATG)n Simple_repeat Simple_repeat 5 34 0 1 675 21 36 0 0 chrX 11897033 11897061 -10525766 + AT_rich Low_complexity Low_complexity 1 28 0 1 675 180 0 0 0 chrX 11897353 11897373 -10525454 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 675 213 132 0 0 chrX 11897573 11897611 -10525216 + (A)n Simple_repeat Simple_repeat 1 38 0 1 675 229 270 22 0 chrX 11897624 11897713 -10525114 + A-rich Low_complexity Low_complexity 6 96 0 1 675 342 171 0 0 chrX 11898008 11898078 -10524749 + (CCGAA)n Simple_repeat Simple_repeat 5 74 0 1 675 23 33 0 0 chrX 11898611 11898641 -10524186 + AT_rich Low_complexity Low_complexity 1 30 0 1 675 21 57 0 0 chrX 11900815 11900850 -10521977 + AT_rich Low_complexity Low_complexity 1 35 0 1 675 223 171 0 0 chrX 11901043 11901084 -10521743 + GA-rich Low_complexity Low_complexity 1 41 0 1 675 237 280 40 0 chrX 11901263 11901363 -10521464 + T-rich Low_complexity Low_complexity 6 109 0 1 675 185 132 26 0 chrX 11901523 11901561 -10521266 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 675 195 42 0 0 chrX 11901783 11901807 -10521020 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 675 206 121 0 0 chrX 11904651 11904684 -10518143 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 675 24 0 0 0 chrX 11907794 11907818 -10515009 + AT_rich Low_complexity Low_complexity 1 24 0 1 675 218 118 0 38 chrX 11908332 11908385 -10514442 + GA-rich Low_complexity Low_complexity 3 53 0 1 675 201 167 0 0 chrX 11908770 11908806 -10514021 + T-rich Low_complexity Low_complexity 1 36 0 1 675 207 114 0 0 chrX 11909090 11909125 -10513702 + (TTG)n Simple_repeat Simple_repeat 1 35 0 1 675 31 44 0 0 chrX 11909688 11909733 -10513094 + AT_rich Low_complexity Low_complexity 1 45 0 1 675 240 111 0 0 chrX 11911520 11911556 -10511271 + (TCG)n Simple_repeat Simple_repeat 1 36 0 1 675 22 35 0 0 chrX 11912566 11912595 -10510232 + AT_rich Low_complexity Low_complexity 1 29 0 1 675 225 65 0 0 chrX 11913815 11913846 -10508981 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 675 203 56 54 27 chrX 11914706 11914743 -10508084 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1 675 22 35 0 0 chrX 11914989 11915018 -10507809 + AT_rich Low_complexity Low_complexity 1 29 0 1 675 22 35 0 0 chrX 11917110 11917139 -10505688 + AT_rich Low_complexity Low_complexity 1 29 0 1 675 216 127 0 60 chrX 11917556 11917623 -10505204 + CT-rich Low_complexity Low_complexity 2 64 0 1 675 267 31 0 0 chrX 11918111 11918143 -10504684 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 675 309 135 0 0 chrX 11922145 11922197 -10500630 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 675 34 72 0 0 chrX 11923233 11923302 -10499525 + AT_rich Low_complexity Low_complexity 1 69 0 1 675 22 35 0 0 chrX 11923403 11923432 -10499395 + AT_rich Low_complexity Low_complexity 1 29 0 1 675 215 163 20 0 chrX 11923731 11923780 -10499047 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 675 240 222 0 0 chrX 11925885 11925939 -10496888 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 675 180 125 0 0 chrX 11926218 11926250 -10496577 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 1 675 338 272 0 0 chrX 11926402 11926527 -10496300 + (TTATA)n Simple_repeat Simple_repeat 4 128 0 1 676 291 93 0 0 chrX 11927773 11927816 -10495011 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 676 37 62 0 0 chrX 11929497 11929562 -10493265 + AT_rich Low_complexity Low_complexity 1 65 0 1 676 208 211 0 0 chrX 11929740 11929778 -10493049 + G-rich Low_complexity Low_complexity 1 38 0 1 676 216 167 0 59 chrX 11930147 11930198 -10492629 + (CAG)n Simple_repeat Simple_repeat 2 49 0 1 676 453 122 0 0 chrX 11930741 11930815 -10492012 + (CTG)n Simple_repeat Simple_repeat 1 74 0 1 676 186 71 0 0 chrX 11931296 11931324 -10491503 + (T)n Simple_repeat Simple_repeat 1 28 0 1 676 362 132 0 13 chrX 11931709 11931786 -10491041 + (CCA)n Simple_repeat Simple_repeat 3 78 0 1 676 225 0 0 0 chrX 11932236 11932261 -10490566 + (TTATA)n Simple_repeat Simple_repeat 5 29 0 1 676 366 42 0 0 chrX 11933470 11933518 -10489309 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 676 292 267 0 0 chrX 11934016 11934091 -10488736 + (CAG)n Simple_repeat Simple_repeat 3 77 0 1 676 192 200 0 0 chrX 11934613 11934658 -10488169 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 1 676 23 0 0 0 chrX 11934923 11934946 -10487881 + AT_rich Low_complexity Low_complexity 1 23 0 1 676 216 176 0 38 chrX 11935934 11935987 -10486840 + (TATATG)n Simple_repeat Simple_repeat 1 51 0 1 676 21 0 0 0 chrX 11936695 11936716 -10486111 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 276 213 77 77 chrX 11937059 11937176 -10485651 - Stalker2_LTR LTR Gypsy -118 306 190 1 676 26 50 0 0 chrX 11937433 11937473 -10485354 + AT_rich Low_complexity Low_complexity 1 40 0 1 676 30 27 0 0 chrX 11937498 11937535 -10485292 + AT_rich Low_complexity Low_complexity 1 37 0 1 676 201 178 0 0 chrX 11938112 11938157 -10484670 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1 676 227 211 19 0 chrX 11939811 11939863 -10482964 + (GACTG)n Simple_repeat Simple_repeat 2 54 0 1 676 4748 193 25 25 chrX 11940849 11942050 -10480777 - SAR_DM Satellite Satellite -444 1201 1 1 676 313 257 0 18 chrX 11942068 11942179 -10480648 + XDMR Unknown Unknown 1 109 -252 1 676 25 31 0 0 chrX 11943567 11943599 -10479228 + AT_rich Low_complexity Low_complexity 1 32 0 1 676 200 213 0 0 chrX 11944613 11944660 -10478167 + T-rich Low_complexity Low_complexity 1 47 0 1 676 202 185 18 18 chrX 11945061 11945116 -10477711 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 1 676 239 265 0 24 chrX 11945343 11945428 -10477399 + (TTG)n Simple_repeat Simple_repeat 2 84 0 1 676 234 156 0 0 chrX 11946660 11946705 -10476122 + (TGG)n Simple_repeat Simple_repeat 3 47 0 1 676 198 0 0 0 chrX 11947009 11947031 -10475796 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 676 183 204 0 0 chrX 11947813 11947867 -10474960 + CT-rich Low_complexity Low_complexity 3 56 0 1 676 231 125 0 0 chrX 11948203 11948243 -10474584 + (T)n Simple_repeat Simple_repeat 1 40 0 1 676 33 25 0 0 chrX 11949360 11949400 -10473427 + AT_rich Low_complexity Low_complexity 1 40 0 1 676 180 77 0 0 chrX 11952005 11952031 -10470796 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 1 676 21 0 0 0 chrX 11952552 11952573 -10470254 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 21 0 0 0 chrX 11953580 11953601 -10469226 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 248 335 0 16 chrX 11955288 11955470 -10467357 + (CTG)n Simple_repeat Simple_repeat 2 180 0 1 676 267 335 0 0 chrX 11955516 11955668 -10467159 + (CTG)n Simple_repeat Simple_repeat 2 153 0 1 676 266 340 0 0 chrX 11955714 11955876 -10466951 + (CTG)n Simple_repeat Simple_repeat 1 162 0 1 676 242 342 0 0 chrX 11956011 11956163 -10466664 + (CTG)n Simple_repeat Simple_repeat 2 153 0 1 676 267 335 0 0 chrX 11956209 11956361 -10466466 + (CTG)n Simple_repeat Simple_repeat 2 153 0 1 676 257 335 0 16 chrX 11956542 11956724 -10466103 + (CTG)n Simple_repeat Simple_repeat 2 180 0 1 676 242 342 0 0 chrX 11956770 11956922 -10465905 + (CTG)n Simple_repeat Simple_repeat 2 153 0 1 676 246 346 0 0 chrX 11956938 11957094 -10465733 + (CTG)n Simple_repeat Simple_repeat 1 156 0 1 676 281 306 0 48 chrX 11957136 11957325 -10465502 + (CTG)n Simple_repeat Simple_repeat 1 180 0 1 676 281 306 0 48 chrX 11957466 11957655 -10465172 + (CTG)n Simple_repeat Simple_repeat 1 180 0 1 676 320 280 0 27 chrX 11958639 11958749 -10464078 + GA-rich Low_complexity Low_complexity 6 112 0 1 676 231 88 0 0 chrX 11960038 11960072 -10462755 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 676 189 0 0 0 chrX 11963876 11963897 -10458930 + (CATCG)n Simple_repeat Simple_repeat 1 21 0 1 676 27 0 0 0 chrX 11964337 11964364 -10458463 + AT_rich Low_complexity Low_complexity 1 27 0 1 676 207 88 0 0 chrX 11965707 11965741 -10457086 + (T)n Simple_repeat Simple_repeat 1 34 0 1 676 40 49 0 0 chrX 11966939 11967000 -10455827 + AT_rich Low_complexity Low_complexity 1 61 0 1 676 246 32 0 0 chrX 11968186 11968217 -10454610 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 676 222 191 0 0 chrX 11969021 11969068 -10453759 + (ATG)n Simple_repeat Simple_repeat 2 48 0 1 676 180 0 0 0 chrX 11970708 11970728 -10452099 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 676 260 176 14 14 chrX 11971079 11971148 -10451679 + T-rich Low_complexity Low_complexity 2 70 0 1 676 28 91 0 0 chrX 11971904 11971981 -10450846 + AT_rich Low_complexity Low_complexity 1 77 0 1 676 221 57 29 0 chrX 11972216 11972251 -10450576 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 676 313 195 0 44 chrX 11973051 11973142 -10449685 + (TATATG)n Simple_repeat Simple_repeat 6 92 0 1 676 21 0 0 0 chrX 11975032 11975053 -10447774 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 366 80 0 0 chrX 11976059 11976109 -10446718 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 676 222 37 0 0 chrX 11976202 11976229 -10446598 + (CTG)n Simple_repeat Simple_repeat 3 29 0 1 676 186 209 0 0 chrX 11976333 11976376 -10446451 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 676 192 222 0 0 chrX 11977714 11977786 -10445041 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 676 21 36 0 0 chrX 11978032 11978060 -10444767 + AT_rich Low_complexity Low_complexity 1 28 0 1 676 25 31 0 0 chrX 11980124 11980156 -10442671 + AT_rich Low_complexity Low_complexity 1 32 0 1 676 204 97 0 0 chrX 11980827 11980858 -10441969 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 676 263 46 102 11 chrX 11982318 11982406 -10440421 + (TA)n Simple_repeat Simple_repeat 2 97 0 1 676 26 0 0 0 chrX 11983446 11983472 -10439355 + AT_rich Low_complexity Low_complexity 1 26 0 1 676 186 71 0 0 chrX 11984108 11984136 -10438691 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 676 21 71 0 0 chrX 11984278 11984320 -10438507 + AT_rich Low_complexity Low_complexity 1 42 0 1 676 513 0 0 0 chrX 11984556 11984613 -10438214 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 676 1456 255 48 36 chrX 11987185 11987346 -10435481 + SAR_DM Satellite Satellite 197 507 -965 1 676 2435 73 41 0 chrX 11987346 11987688 -10435139 - XDMR Unknown Unknown 0 361 6 1 676 1456 255 48 36 chrX 11987688 11987897 -10434930 + SAR_DM Satellite Satellite 508 916 -556 1 676 1726 77 8 0 chrX 11987694 11987942 -10434885 - XDMR Unknown Unknown 0 361 112 1 676 278 87 22 0 chrX 11988490 11988536 -10434291 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 676 180 0 0 0 chrX 11990820 11990840 -10431987 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 676 291 193 0 0 chrX 11990980 11991063 -10431764 + (TG)n Simple_repeat Simple_repeat 2 84 0 1 676 24 0 0 0 chrX 11991849 11991873 -10430954 + AT_rich Low_complexity Low_complexity 1 24 0 1 676 29 0 0 0 chrX 11992484 11992513 -10430314 + AT_rich Low_complexity Low_complexity 1 29 0 1 676 284 147 0 13 chrX 11992605 11992681 -10430146 + (CGAAT)n Simple_repeat Simple_repeat 5 79 0 1 676 222 37 0 0 chrX 11993216 11993243 -10429584 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 676 238 191 0 0 chrX 11994962 11995009 -10427818 + (TTG)n Simple_repeat Simple_repeat 3 49 0 1 676 203 61 30 0 chrX 11995042 11995075 -10427752 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 676 21 0 0 0 chrX 11996765 11996786 -10426041 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 25 0 0 0 chrX 12000457 12000482 -10422345 + AT_rich Low_complexity Low_complexity 1 25 0 1 676 225 0 0 0 chrX 12000726 12000751 -10422076 + (CAT)n Simple_repeat Simple_repeat 1 25 0 1 676 32 43 0 0 chrX 12001761 12001807 -10421020 + AT_rich Low_complexity Low_complexity 1 46 0 1 676 24 53 0 0 chrX 12009361 12009399 -10413428 + AT_rich Low_complexity Low_complexity 1 38 0 1 676 227 203 14 0 chrX 12009703 12009772 -10413055 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 676 284 164 18 0 chrX 12009819 12009874 -10412953 + DNAREP1_DM LINE Penelope 1 56 -538 1 676 281 182 0 0 chrX 12009976 12010031 -10412796 + DNAREP1_DM LINE Penelope 540 594 0 1 676 34 24 0 0 chrX 12011009 12011050 -10411777 + AT_rich Low_complexity Low_complexity 1 41 0 1 676 351 65 0 0 chrX 12013606 12013652 -10409175 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 676 263 122 20 0 chrX 12013699 12013748 -10409079 + (CAAA)n Simple_repeat Simple_repeat 1 50 0 1 676 183 42 0 0 chrX 12014729 12014753 -10408074 + (T)n Simple_repeat Simple_repeat 1 24 0 1 676 192 111 0 0 chrX 12015563 12015599 -10407228 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 676 195 114 0 0 chrX 12015798 12015833 -10406994 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 676 24 85 0 0 chrX 12016012 12016071 -10406756 + AT_rich Low_complexity Low_complexity 1 59 0 1 676 186 118 0 0 chrX 12016983 12017017 -10405810 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 676 225 0 0 0 chrX 12017129 12017154 -10405673 + (ATG)n Simple_repeat Simple_repeat 1 25 0 1 676 28 48 0 0 chrX 12017520 12017562 -10405265 + AT_rich Low_complexity Low_complexity 1 42 0 1 676 225 0 0 0 chrX 12017714 12017739 -10405088 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 676 3157 224 25 40 chrX 12018003 12019452 -10403375 - SAR_DM Satellite Satellite -174 1427 1 1 676 21 0 0 0 chrX 12020993 12021014 -10401813 + GC_rich Low_complexity Low_complexity 1 21 0 1 676 29 98 0 0 chrX 12021474 12021566 -10401261 + AT_rich Low_complexity Low_complexity 1 92 0 1 676 212 105 0 50 chrX 12022849 12022889 -10399938 + GA-rich Low_complexity Low_complexity 2 39 0 1 676 186 143 0 0 chrX 12024258 12024293 -10398534 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1 676 188 86 0 28 chrX 12024308 12024344 -10398483 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 676 23 0 0 0 chrX 12024395 12024418 -10398409 + AT_rich Low_complexity Low_complexity 1 23 0 1 676 189 178 0 0 chrX 12026314 12026359 -10396468 + T-rich Low_complexity Low_complexity 5 49 0 1 676 185 108 27 0 chrX 12026527 12026564 -10396263 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 676 219 69 0 0 chrX 12027302 12027331 -10395496 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 676 21 36 0 0 chrX 12027650 12027678 -10395149 + AT_rich Low_complexity Low_complexity 1 28 0 1 676 255 133 0 0 chrX 12028004 12028049 -10394778 + (A)n Simple_repeat Simple_repeat 1 45 0 1 676 219 88 0 0 chrX 12029302 12029336 -10393491 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 676 23 68 0 0 chrX 12029580 12029624 -10393203 + AT_rich Low_complexity Low_complexity 1 44 0 1 676 219 175 0 0 chrX 12030107 12030164 -10392663 + T-rich Low_complexity Low_complexity 1 57 0 1 676 258 116 0 0 chrX 12031046 12031089 -10391738 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 676 339 44 0 0 chrX 12031419 12031464 -10391363 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 676 31 26 0 0 chrX 12032876 12032914 -10389913 + AT_rich Low_complexity Low_complexity 1 38 0 1 676 234 0 0 0 chrX 12033441 12033467 -10389360 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 676 245 98 24 0 chrX 12034727 12034768 -10388059 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 676 28 0 0 0 chrX 12034949 12034977 -10387850 + AT_rich Low_complexity Low_complexity 1 28 0 1 676 225 139 0 0 chrX 12035411 12035454 -10387373 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 676 216 67 0 0 chrX 12036284 12036314 -10386513 + (T)n Simple_repeat Simple_repeat 1 30 0 1 676 258 32 0 0 chrX 12037395 12037426 -10385401 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 676 22 0 0 0 chrX 12038021 12038043 -10384784 + AT_rich Low_complexity Low_complexity 1 22 0 1 676 29 78 0 0 chrX 12038097 12038161 -10384666 + AT_rich Low_complexity Low_complexity 1 64 0 1 676 257 135 19 0 chrX 12038744 12038796 -10384031 + GA-rich Low_complexity Low_complexity 1 53 0 1 676 275 104 0 20 chrX 12039308 12039357 -10383470 + (GAATG)n Simple_repeat Simple_repeat 1 48 0 1 676 41 58 0 0 chrX 12039733 12039802 -10383025 + AT_rich Low_complexity Low_complexity 1 69 0 1 676 21 0 0 0 chrX 12040407 12040428 -10382399 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 192 97 0 0 chrX 12040453 12040484 -10382343 + (T)n Simple_repeat Simple_repeat 1 31 0 1 676 222 236 0 0 chrX 12040629 12040684 -10382143 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 676 228 67 0 0 chrX 12041641 12041671 -10381156 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 676 274 219 9 9 chrX 12042183 12042289 -10380538 + (TG)n Simple_repeat Simple_repeat 1 106 0 1 676 218 191 0 0 chrX 12042702 12042749 -10380078 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 676 26 0 0 0 chrX 12043215 12043241 -10379586 + AT_rich Low_complexity Low_complexity 1 26 0 1 676 189 0 0 0 chrX 12043388 12043409 -10379418 + (T)n Simple_repeat Simple_repeat 1 21 0 1 676 255 103 0 0 chrX 12043642 12043681 -10379146 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 676 21 0 0 0 chrX 12044358 12044379 -10378448 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 293 140 18 0 chrX 12044938 12044995 -10377832 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 676 22 35 0 0 chrX 12045628 12045657 -10377170 + AT_rich Low_complexity Low_complexity 1 29 0 1 676 218 222 0 0 chrX 12047165 12047210 -10375617 + T-rich Low_complexity Low_complexity 1 45 0 1 676 185 0 0 39 chrX 12050217 12050243 -10372584 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 676 24 32 0 0 chrX 12050636 12050667 -10372160 + AT_rich Low_complexity Low_complexity 1 31 0 1 676 27 29 0 0 chrX 12051520 12051554 -10371273 + AT_rich Low_complexity Low_complexity 1 34 0 1 676 232 254 0 16 chrX 12051899 12051963 -10370864 + A-rich Low_complexity Low_complexity 4 66 0 1 676 22 0 0 0 chrX 12052341 12052363 -10370464 + AT_rich Low_complexity Low_complexity 1 22 0 1 676 29 47 0 0 chrX 12052393 12052436 -10370391 + AT_rich Low_complexity Low_complexity 1 43 0 1 676 269 282 0 0 chrX 12053257 12053360 -10369467 + GA-rich Low_complexity Low_complexity 1 103 0 1 676 21 0 0 0 chrX 12053959 12053980 -10368847 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 31 26 0 0 chrX 12054542 12054580 -10368247 + AT_rich Low_complexity Low_complexity 1 38 0 1 676 34 65 0 0 chrX 12054657 12054719 -10368108 + AT_rich Low_complexity Low_complexity 1 62 0 1 676 321 82 0 0 chrX 12054883 12054932 -10367895 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 676 237 119 0 0 chrX 12055062 12055104 -10367723 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 676 366 61 0 0 chrX 12055411 12055460 -10367367 + (TTG)n Simple_repeat Simple_repeat 3 51 0 1 676 244 204 0 0 chrX 12055460 12055509 -10367318 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 676 21 0 0 0 chrX 12055835 12055856 -10366971 + AT_rich Low_complexity Low_complexity 1 21 0 1 676 237 119 0 0 chrX 12056114 12056156 -10366671 + (T)n Simple_repeat Simple_repeat 1 42 0 1 676 24 32 0 0 chrX 12056586 12056617 -10366210 + AT_rich Low_complexity Low_complexity 1 31 0 1 676 28 0 0 0 chrX 12056658 12056686 -10366141 + AT_rich Low_complexity Low_complexity 1 28 0 1 676 251 325 0 0 chrX 12057030 12057110 -10365717 + (TTCGGG)n Simple_repeat Simple_repeat 5 84 0 1 676 683 163 152 29 chrX 12057576 12057747 -10365080 - DNAREP1_DM LINE Penelope 0 594 403 1 676 355 123 154 0 chrX 12057783 12057848 -10364979 - DNAREP1_DM LINE Penelope -519 75 1 1 677 192 97 0 0 chrX 12060028 12060059 -10362768 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 677 191 62 62 0 chrX 12060469 12060501 -10362326 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 677 189 237 0 0 chrX 12061166 12061225 -10361602 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 677 44181 1 0 0 chrX 12062225 12067582 -10355245 + I_DM LINE I 100 5457 -774 1 677 189 0 0 0 chrX 12067582 12067603 -10355224 + (TAA)n Simple_repeat Simple_repeat 3 23 0 1 677 255 93 0 0 chrX 12068060 12068103 -10354724 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 677 276 259 0 0 chrX 12069086 12069167 -10353660 + T-rich Low_complexity Low_complexity 1 81 0 1 677 24 32 0 0 chrX 12072775 12072806 -10350021 + AT_rich Low_complexity Low_complexity 1 31 0 1 677 222 105 0 0 chrX 12072928 12072966 -10349861 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 677 23 0 0 0 chrX 12074065 12074088 -10348739 + AT_rich Low_complexity Low_complexity 1 23 0 1 677 240 86 0 0 chrX 12074241 12074276 -10348551 + (CAGC)n Simple_repeat Simple_repeat 4 38 0 1 677 207 0 0 0 chrX 12074372 12074395 -10348432 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 677 252 111 0 0 chrX 12074442 12074487 -10348340 + (A)n Simple_repeat Simple_repeat 1 45 0 1 677 23 0 0 0 chrX 12076925 12076948 -10345879 + AT_rich Low_complexity Low_complexity 1 23 0 1 677 27 49 0 0 chrX 12077419 12077460 -10345367 + AT_rich Low_complexity Low_complexity 1 41 0 1 677 261 151 0 0 chrX 12078347 12078400 -10344427 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 677 233 29 29 0 chrX 12079684 12079718 -10343109 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 677 201 39 0 0 chrX 12081155 12081181 -10341646 + (A)n Simple_repeat Simple_repeat 1 26 0 1 677 2511 67 3 0 chrX 12081924 12082281 -10340546 - XDMR Unknown Unknown 0 361 4 1 677 2357 84 3 0 chrX 12082284 12082641 -10340186 - XDMR Unknown Unknown 0 361 4 1 677 1862 266 33 40 chrX 12082512 12082644 -10340183 + SAR_DM Satellite Satellite 224 646 -826 1 677 2315 76 8 6 chrX 12082644 12083001 -10339826 - XDMR Unknown Unknown 0 361 4 1 677 2627 53 3 0 chrX 12083004 12083364 -10339463 - XDMR Unknown Unknown 0 361 1 1 677 1862 266 33 40 chrX 12083364 12083551 -10339276 + SAR_DM Satellite Satellite 647 1254 -218 1 677 342 61 45 0 chrX 12083618 12083684 -10339143 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 677 25 31 0 0 chrX 12086436 12086468 -10336359 + AT_rich Low_complexity Low_complexity 1 32 0 1 677 30 45 0 0 chrX 12087103 12087147 -10335680 + AT_rich Low_complexity Low_complexity 1 44 0 1 677 26 30 0 0 chrX 12087242 12087275 -10335552 + AT_rich Low_complexity Low_complexity 1 33 0 1 677 258 81 0 0 chrX 12087502 12087539 -10335288 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1 677 222 37 0 0 chrX 12087731 12087758 -10335069 + (CAT)n Simple_repeat Simple_repeat 1 27 0 1 677 290 111 23 58 chrX 12090296 12090382 -10332445 + ROO_I LTR Pao 639 721 -7535 1 677 228 67 0 0 chrX 12093671 12093701 -10329126 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 677 26 30 0 0 chrX 12093992 12094025 -10328802 + AT_rich Low_complexity Low_complexity 1 33 0 1 677 21 0 0 0 chrX 12094947 12094968 -10327859 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 225 0 0 0 chrX 12095384 12095409 -10327418 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 1 677 255 31 0 0 chrX 12095568 12095600 -10327227 + (T)n Simple_repeat Simple_repeat 1 32 0 1 677 31 26 0 0 chrX 12097184 12097222 -10325605 + AT_rich Low_complexity Low_complexity 1 38 0 1 677 21 71 0 0 chrX 12100821 12100863 -10321964 + AT_rich Low_complexity Low_complexity 1 42 0 1 677 198 91 0 0 chrX 12101257 12101290 -10321537 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 1 677 180 0 0 0 chrX 12101504 12101524 -10321303 + (CAGG)n Simple_repeat Simple_repeat 4 23 0 1 677 216 97 0 0 chrX 12102093 12102124 -10320703 + (TTCGG)n Simple_repeat Simple_repeat 1 31 0 1 677 198 71 0 0 chrX 12103174 12103202 -10319625 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 677 204 182 0 0 chrX 12104217 12104261 -10318566 + A-rich Low_complexity Low_complexity 1 44 0 1 677 203 125 25 0 chrX 12104431 12104471 -10318356 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 677 26 64 0 0 chrX 12105016 12105063 -10317764 + AT_rich Low_complexity Low_complexity 1 47 0 1 677 180 0 0 0 chrX 12105648 12105668 -10317159 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 1 677 219 189 57 0 chrX 12107151 12107204 -10315623 + T-rich Low_complexity Low_complexity 6 61 0 1 677 201 39 0 0 chrX 12107326 12107352 -10315475 + (CAGG)n Simple_repeat Simple_repeat 4 29 0 1 677 236 161 0 16 chrX 12108127 12108190 -10314637 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 677 303 104 0 0 chrX 12108548 12108596 -10314231 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 677 248 321 0 0 chrX 12108723 12108829 -10313998 + A-rich Low_complexity Low_complexity 1 106 0 1 677 24 0 0 0 chrX 12109988 12110012 -10312815 + AT_rich Low_complexity Low_complexity 1 24 0 1 677 207 88 0 0 chrX 12110265 12110299 -10312528 + (T)n Simple_repeat Simple_repeat 1 34 0 1 677 228 255 0 0 chrX 12111475 12111526 -10311301 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 1 677 213 39 0 0 chrX 12112393 12112419 -10310408 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 677 219 36 0 0 chrX 12112740 12112768 -10310059 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 677 180 0 0 0 chrX 12113577 12113597 -10309230 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 1 677 234 196 0 18 chrX 12114956 12115013 -10307814 + T-rich Low_complexity Low_complexity 5 60 0 1 677 189 0 0 0 chrX 12116066 12116087 -10306740 + (CAGT)n Simple_repeat Simple_repeat 3 23 0 1 677 34 24 0 0 chrX 12117006 12117047 -10305780 + AT_rich Low_complexity Low_complexity 1 41 0 1 677 203 277 0 24 chrX 12117249 12117334 -10305493 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 1 677 186 43 0 0 chrX 12118441 12118464 -10304363 + (A)n Simple_repeat Simple_repeat 1 23 0 1 677 203 278 18 44 chrX 12118656 12118769 -10304058 + (CATATA)n Simple_repeat Simple_repeat 4 113 0 1 677 217 200 40 0 chrX 12118714 12118764 -10304063 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 1 677 27 0 0 0 chrX 12121423 12121450 -10301377 + AT_rich Low_complexity Low_complexity 1 27 0 1 677 180 0 0 0 chrX 12121672 12121692 -10301135 + (T)n Simple_repeat Simple_repeat 1 20 0 1 677 22 70 0 0 chrX 12122144 12122187 -10300640 + AT_rich Low_complexity Low_complexity 1 43 0 1 677 25 66 0 38 chrX 12122200 12122279 -10300548 + AT_rich Low_complexity Low_complexity 1 76 0 1 677 198 91 0 0 chrX 12122616 12122649 -10300178 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1 677 192 40 0 0 chrX 12123176 12123201 -10299626 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 1 677 207 197 32 16 chrX 12124075 12124137 -10298690 + (TAA)n Simple_repeat Simple_repeat 1 63 0 1 677 297 169 0 0 chrX 12125828 12125887 -10296940 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 677 252 86 0 0 chrX 12127390 12127425 -10295402 + (TGGA)n Simple_repeat Simple_repeat 4 38 0 1 677 216 111 0 0 chrX 12127775 12127811 -10295016 + (T)n Simple_repeat Simple_repeat 1 36 0 1 677 208 157 39 19 chrX 12128056 12128108 -10294719 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 677 183 42 0 0 chrX 12133273 12133297 -10289530 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 677 207 218 0 0 chrX 12133391 12133446 -10289381 + A-rich Low_complexity Low_complexity 1 55 0 1 677 28 0 0 0 chrX 12134257 12134285 -10288542 + AT_rich Low_complexity Low_complexity 1 28 0 1 677 207 69 0 0 chrX 12134855 12134884 -10287943 + (ATTCG)n Simple_repeat Simple_repeat 5 33 0 1 677 240 158 0 0 chrX 12134982 12135039 -10287788 + (TGGG)n Simple_repeat Simple_repeat 1 57 0 1 677 186 206 0 0 chrX 12135640 12135703 -10287124 + (CAT)n Simple_repeat Simple_repeat 1 63 0 1 677 24 0 0 0 chrX 12136539 12136563 -10286264 + AT_rich Low_complexity Low_complexity 1 24 0 1 677 24 0 0 0 chrX 12137828 12137852 -10284975 + AT_rich Low_complexity Low_complexity 1 24 0 1 677 189 94 0 0 chrX 12139075 12139107 -10283720 + (A)n Simple_repeat Simple_repeat 1 32 0 1 677 288 0 0 0 chrX 12139499 12139531 -10283296 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 677 222 91 0 0 chrX 12140206 12140239 -10282588 + (AACTG)n Simple_repeat Simple_repeat 4 36 0 1 677 210 37 0 0 chrX 12140803 12140830 -10281997 + (TAA)n Simple_repeat Simple_repeat 3 29 0 1 677 281 48 0 45 chrX 12141165 12141209 -10281618 + (ATATG)n Simple_repeat Simple_repeat 2 43 0 1 677 21 0 0 0 chrX 12142691 12142712 -10280115 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 432 179 0 0 chrX 12143004 12143082 -10279745 + DNAREP1_DM LINE Penelope 1 78 -516 1 677 407 85 132 39 chrX 12143104 12143233 -10279594 + DNAREP1_DM LINE Penelope 414 594 0 1 677 22 0 0 0 chrX 12145218 12145240 -10277587 + AT_rich Low_complexity Low_complexity 1 22 0 1 677 224 208 0 0 chrX 12145666 12145719 -10277108 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 677 246 62 0 0 chrX 12148245 12148277 -10274550 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 677 261 57 0 0 chrX 12148482 12148517 -10274310 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 677 189 0 0 0 chrX 12149334 12149355 -10273472 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 677 234 105 0 0 chrX 12152338 12152376 -10270451 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 677 249 57 0 0 chrX 12152706 12152741 -10270086 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 677 22 0 0 0 chrX 12153358 12153380 -10269447 + AT_rich Low_complexity Low_complexity 1 22 0 1 677 189 0 0 0 chrX 12153450 12153471 -10269356 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 677 267 152 0 0 chrX 12153818 12153864 -10268963 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 677 240 143 0 0 chrX 12154515 12154557 -10268270 + (ATGGTG)n Simple_repeat Simple_repeat 1 42 0 1 677 203 133 0 0 chrX 12154991 12155021 -10267806 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 1 677 195 167 0 0 chrX 12156396 12156438 -10266389 + T-rich Low_complexity Low_complexity 2 43 0 1 677 22 56 0 0 chrX 12157111 12157147 -10265680 + AT_rich Low_complexity Low_complexity 1 36 0 1 677 198 171 0 0 chrX 12157756 12157797 -10265030 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 677 243 0 0 0 chrX 12158134 12158161 -10264666 + (T)n Simple_repeat Simple_repeat 1 27 0 1 677 204 111 0 0 chrX 12158978 12159014 -10263813 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 677 21 0 0 0 chrX 12159872 12159893 -10262934 + AT_rich Low_complexity Low_complexity 1 21 0 1 677 248 290 0 0 chrX 12160132 12160201 -10262626 + CT-rich Low_complexity Low_complexity 2 70 0 1 677 203 262 0 0 chrX 12161580 12161641 -10261186 + T-rich Low_complexity Low_complexity 1 61 0 1 677 207 184 0 0 chrX 12162456 12162494 -10260333 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 677 201 39 0 0 chrX 12163088 12163114 -10259713 + (A)n Simple_repeat Simple_repeat 1 26 0 1 677 23 0 0 0 chrX 12163253 12163276 -10259551 + AT_rich Low_complexity Low_complexity 1 23 0 1 677 186 43 0 0 chrX 12164477 12164500 -10258327 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 677 212 149 21 0 chrX 12164798 12164845 -10257982 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 677 21 36 0 0 chrX 12165379 12165407 -10257420 + AT_rich Low_complexity Low_complexity 1 28 0 1 677 210 105 0 0 chrX 12166339 12166377 -10256450 + (A)n Simple_repeat Simple_repeat 1 38 0 1 677 264 297 0 0 chrX 12168309 12168373 -10254454 + (TGG)n Simple_repeat Simple_repeat 3 66 0 1 677 249 33 0 0 chrX 12170728 12170758 -10252069 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 677 22 35 0 0 chrX 12171075 12171104 -10251723 + AT_rich Low_complexity Low_complexity 1 29 0 1 677 241 206 14 14 chrX 12171684 12171753 -10251074 + T-rich Low_complexity Low_complexity 4 72 0 1 677 201 139 0 0 chrX 12172339 12172382 -10250445 + (T)n Simple_repeat Simple_repeat 1 43 0 1 677 216 209 0 0 chrX 12173045 12173088 -10249739 + (TTG)n Simple_repeat Simple_repeat 1 43 0 1 677 271 162 12 12 chrX 12173482 12173563 -10249264 + (TG)n Simple_repeat Simple_repeat 2 82 0 1 677 200 61 0 57 chrX 12173834 12173869 -10248958 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 677 198 143 0 0 chrX 12174744 12174779 -10248048 + (CGGA)n Simple_repeat Simple_repeat 3 37 0 1 677 30 45 0 0 chrX 12175051 12175095 -10247732 + AT_rich Low_complexity Low_complexity 1 44 0 1 677 198 0 0 0 chrX 12176774 12176796 -10246031 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 677 27 0 0 0 chrX 12177424 12177451 -10245376 + AT_rich Low_complexity Low_complexity 1 27 0 1 677 186 71 0 0 chrX 12177941 12177969 -10244858 + (CGAAT)n Simple_repeat Simple_repeat 1 28 0 1 677 195 204 0 0 chrX 12178924 12178978 -10243849 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 677 204 233 0 16 chrX 12179737 12179798 -10243029 + (CAG)n Simple_repeat Simple_repeat 3 62 0 1 677 226 242 32 32 chrX 12182070 12182164 -10240663 + A-rich Low_complexity Low_complexity 4 97 0 1 677 186 43 0 0 chrX 12182966 12182989 -10239838 + (ATG)n Simple_repeat Simple_repeat 1 23 0 1 677 290 331 7 7 chrX 12183343 12183483 -10239344 - XDMR Unknown Unknown -221 140 1 1 677 1162 274 42 56 chrX 12183391 12184033 -10238794 + SAR_DM Satellite Satellite 623 1255 -217 1 677 484 241 38 42 chrX 12183844 12184056 -10238771 - XDMR Unknown Unknown 0 361 151 1 677 291 54 0 0 chrX 12184699 12184736 -10238091 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 677 249 119 0 0 chrX 12184846 12184888 -10237939 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 677 189 0 0 0 chrX 12186436 12186457 -10236370 + (T)n Simple_repeat Simple_repeat 1 21 0 1 677 22 0 0 0 chrX 12187983 12188005 -10234822 + AT_rich Low_complexity Low_complexity 1 22 0 1 678 290 26 0 25 chrX 12189833 12189873 -10232954 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 678 180 125 0 0 chrX 12190275 12190307 -10232520 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 1 678 207 114 0 0 chrX 12190484 12190519 -10232308 + (A)n Simple_repeat Simple_repeat 1 35 0 1 678 216 0 0 0 chrX 12190704 12190728 -10232099 + (A)n Simple_repeat Simple_repeat 1 24 0 1 678 22 56 0 0 chrX 12191138 12191174 -10231653 + AT_rich Low_complexity Low_complexity 1 36 0 1 678 239 79 0 26 chrX 12191571 12191610 -10231217 + (TTTCG)n Simple_repeat Simple_repeat 1 38 0 1 678 29 28 0 0 chrX 12193174 12193210 -10229617 + AT_rich Low_complexity Low_complexity 1 36 0 1 678 192 135 0 0 chrX 12193310 12193347 -10229480 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 678 225 0 0 0 chrX 12193497 12193522 -10229305 + (CTACT)n Simple_repeat Simple_repeat 2 26 0 1 678 30 45 0 0 chrX 12194246 12194290 -10228537 + AT_rich Low_complexity Low_complexity 1 44 0 1 678 21 36 0 0 chrX 12194603 12194631 -10228196 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 25 0 0 0 chrX 12196042 12196067 -10226760 + AT_rich Low_complexity Low_complexity 1 25 0 1 678 11423 4 0 0 chrX 12196067 12197291 -10225536 - BS2 LINE Jockey 0 4721 3498 1 678 201 273 0 0 chrX 12197334 12197389 -10225438 + T-rich Low_complexity Low_complexity 1 55 0 1 678 342 0 0 0 chrX 12199407 12199445 -10223382 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 678 225 0 0 0 chrX 12202213 12202238 -10220589 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 678 189 74 0 0 chrX 12202422 12202449 -10220378 + (A)n Simple_repeat Simple_repeat 1 27 0 1 678 361 103 29 0 chrX 12203728 12203796 -10219031 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 678 203 190 0 23 chrX 12204810 12204853 -10217974 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 1 678 209 238 0 0 chrX 12205022 12205064 -10217763 + A-rich Low_complexity Low_complexity 100 141 0 1 678 186 103 0 0 chrX 12206323 12206352 -10216475 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 678 217 89 44 0 chrX 12206421 12206466 -10216361 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 678 242 56 28 0 chrX 12206642 12206678 -10216149 + (GAAAA)n Simple_repeat Simple_repeat 1 37 0 1 678 243 0 0 0 chrX 12207858 12207885 -10214942 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 678 186 143 0 0 chrX 12208018 12208053 -10214774 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 678 233 138 0 79 chrX 12208802 12208865 -10213962 + (CTGTG)n Simple_repeat Simple_repeat 5 62 0 1 678 24 32 0 0 chrX 12209186 12209217 -10213610 + AT_rich Low_complexity Low_complexity 1 31 0 1 678 24 0 0 0 chrX 12209690 12209714 -10213113 + AT_rich Low_complexity Low_complexity 1 24 0 1 678 203 231 0 0 chrX 12210492 12210531 -10212296 + G-rich Low_complexity Low_complexity 4 42 0 1 678 186 103 0 0 chrX 12210758 12210787 -10212040 + (CTCA)n Simple_repeat Simple_repeat 2 30 0 1 678 24 32 0 0 chrX 12211134 12211165 -10211662 + AT_rich Low_complexity Low_complexity 1 31 0 1 678 244 77 25 25 chrX 12213862 12213902 -10208925 - TART LINE telomeric -5088 9389 9350 1 678 236 286 0 0 chrX 12214282 12214345 -10208482 + GA-rich Low_complexity Low_complexity 6 68 0 1 678 215 204 0 0 chrX 12216780 12216824 -10206003 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 678 204 40 0 0 chrX 12216857 12216882 -10205945 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 678 301 291 0 0 chrX 12217130 12217209 -10205618 + (CAA)n Simple_repeat Simple_repeat 3 81 0 1 678 209 196 0 0 chrX 12217392 12217438 -10205389 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 678 244 136 0 63 chrX 12217607 12217670 -10205157 + (AATTG)n Simple_repeat Simple_repeat 2 60 0 1 678 189 121 0 0 chrX 12218255 12218288 -10204539 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 678 216 0 0 0 chrX 12219010 12219034 -10203793 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 678 188 67 0 32 chrX 12219763 12219794 -10203033 + (TTCGGG)n Simple_repeat Simple_repeat 6 35 0 1 678 216 0 0 0 chrX 12220526 12220550 -10202277 + (TAG)n Simple_repeat Simple_repeat 1 24 0 1 678 23 68 0 0 chrX 12221263 12221307 -10201520 + AT_rich Low_complexity Low_complexity 1 44 0 1 678 291 104 0 0 chrX 12225292 12225340 -10197487 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 678 402 108 12 24 chrX 12225616 12225701 -10197126 + (TA)n Simple_repeat Simple_repeat 1 84 0 1 678 37 23 0 0 chrX 12226267 12226311 -10196516 + AT_rich Low_complexity Low_complexity 1 44 0 1 678 21 36 0 0 chrX 12226394 12226422 -10196405 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 25 51 0 0 chrX 12226472 12226511 -10196316 + AT_rich Low_complexity Low_complexity 1 39 0 1 678 24 0 0 0 chrX 12227639 12227663 -10195164 + AT_rich Low_complexity Low_complexity 1 24 0 1 678 212 185 22 90 chrX 12227842 12227931 -10194896 + A-rich Low_complexity Low_complexity 2 84 0 1 678 186 174 0 0 chrX 12228539 12228585 -10194242 + A-rich Low_complexity Low_complexity 1 46 0 1 678 25 51 0 0 chrX 12229195 12229234 -10193593 + AT_rich Low_complexity Low_complexity 1 39 0 1 678 1098 289 58 68 chrX 12230378 12231480 -10191347 + SAR_DM Satellite Satellite 165 1255 -217 1 678 373 288 32 50 chrX 12231277 12231555 -10191272 - XDMR_DM Unknown Unknown -17 343 71 1 678 1173 278 58 58 chrX 12231542 12232522 -10190305 + SAR_DM Satellite Satellite 1 979 -218 1 678 258 81 0 0 chrX 12233191 12233228 -10189599 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 678 23 33 0 0 chrX 12235038 12235068 -10187759 + AT_rich Low_complexity Low_complexity 1 30 0 1 678 218 206 0 16 chrX 12235583 12235647 -10187180 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 678 192 97 0 0 chrX 12235895 12235926 -10186901 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 1 678 209 264 0 0 chrX 12236757 12236810 -10186017 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 678 233 306 0 0 chrX 12237182 12237254 -10185573 + GA-rich Low_complexity Low_complexity 3 74 0 1 678 26 93 0 0 chrX 12237436 12237511 -10185316 + AT_rich Low_complexity Low_complexity 1 75 0 1 678 210 150 0 0 chrX 12237986 12238026 -10184801 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 678 23 0 0 0 chrX 12239624 12239647 -10183180 + AT_rich Low_complexity Low_complexity 1 23 0 1 678 217 240 0 20 chrX 12242064 12242115 -10180712 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 678 267 190 0 0 chrX 12242243 12242301 -10180526 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 678 217 289 24 16 chrX 12242827 12242950 -10179877 + T-rich Low_complexity Low_complexity 2 125 0 1 678 281 174 0 80 chrX 12246097 12246172 -10176655 + ROO_I LTR Pao 652 720 -7536 1 678 25 31 0 0 chrX 12246559 12246591 -10176236 + AT_rich Low_complexity Low_complexity 1 32 0 1 678 29 0 0 0 chrX 12246860 12246889 -10175938 + AT_rich Low_complexity Low_complexity 1 29 0 1 678 24 0 0 0 chrX 12247407 12247431 -10175396 + AT_rich Low_complexity Low_complexity 1 24 0 1 678 218 283 17 0 chrX 12247587 12247647 -10175180 + (CATA)n Simple_repeat Simple_repeat 3 63 0 1 678 183 42 0 0 chrX 12247822 12247846 -10174981 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 678 243 125 0 0 chrX 12248236 12248276 -10174551 + (CAAAC)n Simple_repeat Simple_repeat 5 44 0 1 678 207 146 0 0 chrX 12250169 12250210 -10172617 + (TTGG)n Simple_repeat Simple_repeat 4 44 0 1 678 22 0 0 0 chrX 12250313 12250335 -10172492 + GC_rich Low_complexity Low_complexity 1 22 0 1 678 189 0 0 0 chrX 12250457 12250478 -10172349 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1 678 25 0 0 0 chrX 12252595 12252620 -10170207 + AT_rich Low_complexity Low_complexity 1 25 0 1 678 23 78 0 0 chrX 12253566 12253617 -10169210 + AT_rich Low_complexity Low_complexity 1 51 0 1 678 275 141 0 15 chrX 12254109 12254174 -10168653 + (GCTG)n Simple_repeat Simple_repeat 3 66 0 1 678 244 268 0 14 chrX 12254418 12254490 -10168337 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 1 678 21 0 0 0 chrX 12254828 12254849 -10167978 + AT_rich Low_complexity Low_complexity 1 21 0 1 678 21 36 0 0 chrX 12256038 12256066 -10166761 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 207 0 0 0 chrX 12256336 12256359 -10166468 + (T)n Simple_repeat Simple_repeat 1 23 0 1 678 25 31 0 0 chrX 12256397 12256429 -10166398 + AT_rich Low_complexity Low_complexity 1 32 0 1 678 231 204 0 0 chrX 12257598 12257652 -10165175 + (CAA)n Simple_repeat Simple_repeat 1 54 0 1 678 222 37 0 0 chrX 12259531 12259558 -10163269 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 678 22 0 0 0 chrX 12259646 12259668 -10163159 + AT_rich Low_complexity Low_complexity 1 22 0 1 678 208 216 0 0 chrX 12259673 12259710 -10163117 + (CGGA)n Simple_repeat Simple_repeat 4 40 0 1 678 291 130 0 0 chrX 12259885 12259939 -10162888 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 678 302 138 0 17 chrX 12261421 12261480 -10161347 + (CAGTT)n Simple_repeat Simple_repeat 2 59 0 1 678 21 57 0 0 chrX 12262257 12262292 -10160535 + AT_rich Low_complexity Low_complexity 1 35 0 1 678 210 162 0 70 chrX 12264749 12264835 -10157992 + (CAT)n Simple_repeat Simple_repeat 3 82 0 1 678 2301 262 31 41 chrX 12265116 12265225 -10157602 + SAR_DM Satellite Satellite 247 591 -881 1 678 2769 53 3 0 chrX 12265225 12265585 -10157242 - XDMR Unknown Unknown 0 361 1 1 678 2769 53 3 0 chrX 12265585 12265945 -10156882 - XDMR Unknown Unknown 0 361 1 1 678 2301 262 31 41 chrX 12265945 12266159 -10156668 + SAR_DM Satellite Satellite 592 1278 -194 1 678 282 231 0 0 chrX 12266209 12266282 -10156545 + SAR_DM Satellite Satellite 1 73 -611 1 678 26 30 0 0 chrX 12269600 12269633 -10153194 + AT_rich Low_complexity Low_complexity 1 33 0 1 678 21 0 0 0 chrX 12272798 12272819 -10150008 + GC_rich Low_complexity Low_complexity 1 21 0 1 678 41 87 0 0 chrX 12273184 12273288 -10149539 + AT_rich Low_complexity Low_complexity 1 104 0 1 678 2259 15 11 11 chrX 12275958 12276233 -10146594 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 678 8793 1 0 0 chrX 12276233 12277178 -10145649 - BLASTOPIA_I LTR Gypsy 0 4481 3537 1 678 20442 1 0 0 chrX 12277177 12279528 -10143299 - BLASTOPIA_I LTR Gypsy -2129 2352 1 1 678 2107 15 11 11 chrX 12279528 12279803 -10143024 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 678 24 0 0 0 chrX 12279806 12279830 -10142997 + AT_rich Low_complexity Low_complexity 1 24 0 1 678 31 44 0 0 chrX 12281195 12281240 -10141587 + AT_rich Low_complexity Low_complexity 1 45 0 1 678 29 47 0 0 chrX 12282472 12282515 -10140312 + AT_rich Low_complexity Low_complexity 1 43 0 1 678 45 0 0 0 chrX 12282885 12282930 -10139897 + AT_rich Low_complexity Low_complexity 1 45 0 1 678 26 0 0 0 chrX 12284996 12285022 -10137805 + AT_rich Low_complexity Low_complexity 1 26 0 1 678 39 0 0 0 chrX 12288722 12288761 -10134066 + AT_rich Low_complexity Low_complexity 1 39 0 1 678 198 174 0 0 chrX 12289301 12289347 -10133480 + CT-rich Low_complexity Low_complexity 1 46 0 1 678 186 71 0 0 chrX 12289395 12289423 -10133404 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 678 32 43 0 0 chrX 12290347 12290393 -10132434 + AT_rich Low_complexity Low_complexity 1 46 0 1 678 224 197 61 0 chrX 12291332 12291398 -10131429 + (TTTA)n Simple_repeat Simple_repeat 3 72 0 1 678 231 184 41 0 chrX 12291333 12291382 -10131445 + (TTAG)n Simple_repeat Simple_repeat 2 52 0 1 678 220 211 0 0 chrX 12291812 12291864 -10130963 + A-rich Low_complexity Low_complexity 1 52 0 1 678 226 300 0 11 chrX 12292490 12292581 -10130246 + (CA)n Simple_repeat Simple_repeat 1 90 0 1 678 210 91 0 0 chrX 12292662 12292695 -10130132 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 678 21 36 0 0 chrX 12293674 12293702 -10129125 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 21 0 0 0 chrX 12293734 12293755 -10129072 + AT_rich Low_complexity Low_complexity 1 21 0 1 678 279 114 0 0 chrX 12293961 12294005 -10128822 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 678 22 0 0 0 chrX 12294749 12294771 -10128056 + AT_rich Low_complexity Low_complexity 1 22 0 1 678 183 42 0 0 chrX 12295996 12296020 -10126807 + (T)n Simple_repeat Simple_repeat 1 24 0 1 678 180 125 0 0 chrX 12297864 12297896 -10124931 + (GAGTG)n Simple_repeat Simple_repeat 5 36 0 1 678 183 129 0 0 chrX 12298284 12298315 -10124512 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 1 678 28 0 0 0 chrX 12298650 12298678 -10124149 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 204 311 14 0 chrX 12298895 12298969 -10123858 + (CCCA)n Simple_repeat Simple_repeat 2 76 0 1 678 21 71 0 0 chrX 12299470 12299512 -10123315 + AT_rich Low_complexity Low_complexity 1 42 0 1 678 23 78 0 0 chrX 12299759 12299810 -10123017 + AT_rich Low_complexity Low_complexity 1 51 0 1 678 631 134 0 32 chrX 12302582 12302705 -10120122 - DMRP1 Unknown Unknown -47 299 181 1 678 22 56 0 0 chrX 12306015 12306051 -10116776 + AT_rich Low_complexity Low_complexity 1 36 0 1 678 24 0 0 0 chrX 12306416 12306440 -10116387 + AT_rich Low_complexity Low_complexity 1 24 0 1 678 264 77 0 0 chrX 12306798 12306837 -10115990 + (CCAA)n Simple_repeat Simple_repeat 2 40 0 1 678 33 73 0 0 chrX 12308125 12308193 -10114634 + AT_rich Low_complexity Low_complexity 1 68 0 1 678 189 0 0 0 chrX 12309385 12309406 -10113421 + (T)n Simple_repeat Simple_repeat 1 21 0 1 678 249 189 13 51 chrX 12309705 12309783 -10113044 + (TTGGGG)n Simple_repeat Simple_repeat 6 80 0 1 678 22 0 0 0 chrX 12310991 12311013 -10111814 + AT_rich Low_complexity Low_complexity 1 22 0 1 678 215 316 0 0 chrX 12311363 12311461 -10111366 + T-rich Low_complexity Low_complexity 1 98 0 1 678 246 176 0 0 chrX 12311899 12311950 -10110877 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 1 678 189 94 0 0 chrX 12312512 12312544 -10110283 + (T)n Simple_repeat Simple_repeat 1 32 0 1 678 28 29 0 0 chrX 12313774 12313809 -10109018 + AT_rich Low_complexity Low_complexity 1 35 0 1 678 21 36 0 0 chrX 12318073 12318101 -10104726 + AT_rich Low_complexity Low_complexity 1 28 0 1 678 495 147 9 29 chrX 12318378 12318483 -10104344 - DNAREP1_DM LINE Penelope 0 594 492 1 678 354 255 9 0 chrX 12318484 12318590 -10104237 - DNAREP1_DM LINE Penelope -486 108 2 1 678 27 0 0 0 chrX 12318695 12318722 -10104105 + AT_rich Low_complexity Low_complexity 1 27 0 1 678 185 132 0 26 chrX 12319050 12319089 -10103738 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 678 213 326 0 0 chrX 12319958 12320050 -10102777 + (ATGGTG)n Simple_repeat Simple_repeat 4 95 0 1 679 207 88 0 0 chrX 12323765 12323799 -10099028 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 679 22 0 0 0 chrX 12325618 12325640 -10097187 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 180 167 0 0 chrX 12325897 12325945 -10096882 + CT-rich Low_complexity Low_complexity 2 49 0 1 679 23 33 0 0 chrX 12326486 12326516 -10096311 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 198 0 0 0 chrX 12326646 12326668 -10096159 + (ATGGTG)n Simple_repeat Simple_repeat 6 27 0 1 679 329 141 14 0 chrX 12326755 12326826 -10096001 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 679 255 61 0 0 chrX 12327058 12327091 -10095736 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 679 23 0 0 0 chrX 12328639 12328662 -10094165 + AT_rich Low_complexity Low_complexity 1 23 0 1 679 22 0 0 0 chrX 12329124 12329146 -10093681 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 51 0 0 0 chrX 12329427 12329478 -10093349 + AT_rich Low_complexity Low_complexity 1 51 0 1 679 185 0 40 0 chrX 12329856 12329881 -10092946 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 1 679 26 0 0 0 chrX 12329994 12330020 -10092807 + AT_rich Low_complexity Low_complexity 1 26 0 1 679 3720 186 20 16 chrX 12331604 12332701 -10090126 - SAR_DM Satellite Satellite -511 1101 1 1 679 199 54 26 26 chrX 12333385 12333423 -10089404 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 1 679 30 0 0 0 chrX 12333476 12333506 -10089321 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 31 0 0 0 chrX 12333557 12333588 -10089239 + AT_rich Low_complexity Low_complexity 1 31 0 1 679 23 0 0 0 chrX 12333846 12333869 -10088958 + AT_rich Low_complexity Low_complexity 1 23 0 1 679 219 69 0 0 chrX 12335416 12335445 -10087382 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 679 24 0 0 0 chrX 12335622 12335646 -10087181 + AT_rich Low_complexity Low_complexity 1 24 0 1 679 24 85 0 0 chrX 12336891 12336950 -10085877 + AT_rich Low_complexity Low_complexity 1 59 0 1 679 200 100 0 24 chrX 12337170 12337211 -10085616 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 679 257 258 0 0 chrX 12337720 12337786 -10085041 + GA-rich Low_complexity Low_complexity 3 68 0 1 679 186 143 0 0 chrX 12338949 12338984 -10083843 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 679 222 331 0 33 chrX 12340024 12340208 -10082619 + (CAA)n Simple_repeat Simple_repeat 1 178 0 1 679 223 182 0 0 chrX 12340276 12340320 -10082507 + (CAA)n Simple_repeat Simple_repeat 1 44 0 1 679 333 125 0 0 chrX 12340449 12340505 -10082322 + (CAG)n Simple_repeat Simple_repeat 1 56 0 1 679 375 98 0 0 chrX 12340666 12340727 -10082100 + (CAG)n Simple_repeat Simple_repeat 1 61 0 1 679 204 163 0 0 chrX 12340841 12340884 -10081943 + (CAG)n Simple_repeat Simple_repeat 3 45 0 1 679 345 173 0 0 chrX 12340948 12341029 -10081798 - ROO_I LTR Pao -7523 733 653 1 679 198 0 0 0 chrX 12341187 12341209 -10081618 + (CGA)n Simple_repeat Simple_repeat 2 23 0 1 679 22 0 0 0 chrX 12342017 12342039 -10080788 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 23 97 0 0 chrX 12344611 12344683 -10078144 + AT_rich Low_complexity Low_complexity 1 72 0 1 679 26 0 0 0 chrX 12345487 12345513 -10077314 + AT_rich Low_complexity Low_complexity 1 26 0 1 679 198 164 0 0 chrX 12345977 12346032 -10076795 + T-rich Low_complexity Low_complexity 1 55 0 1 679 24 0 0 0 chrX 12346436 12346460 -10076367 + AT_rich Low_complexity Low_complexity 1 24 0 1 679 26 50 0 0 chrX 12346895 12346935 -10075892 + AT_rich Low_complexity Low_complexity 1 40 0 1 679 210 118 0 0 chrX 12347556 12347590 -10075237 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1 679 39 22 0 0 chrX 12349465 12349511 -10073316 + AT_rich Low_complexity Low_complexity 1 46 0 1 679 43 0 0 0 chrX 12351563 12351606 -10071221 + AT_rich Low_complexity Low_complexity 1 43 0 1 679 189 154 0 0 chrX 12352124 12352163 -10070664 + (CAGTT)n Simple_repeat Simple_repeat 5 43 0 1 679 33 56 0 0 chrX 12352314 12352368 -10070459 + AT_rich Low_complexity Low_complexity 1 54 0 1 679 25 0 0 0 chrX 12352458 12352483 -10070344 + AT_rich Low_complexity Low_complexity 1 25 0 1 679 21 0 0 0 chrX 12353181 12353202 -10069625 + AT_rich Low_complexity Low_complexity 1 21 0 1 679 23 33 0 0 chrX 12353345 12353375 -10069452 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 198 0 0 0 chrX 12354280 12354302 -10068525 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 679 189 0 0 0 chrX 12355957 12355978 -10066849 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1 679 22 35 0 0 chrX 12357238 12357267 -10065560 + AT_rich Low_complexity Low_complexity 1 29 0 1 679 210 71 0 0 chrX 12357556 12357584 -10065243 + (CAGAA)n Simple_repeat Simple_repeat 3 30 0 1 679 227 149 43 0 chrX 12358314 12358361 -10064466 + (CAA)n Simple_repeat Simple_repeat 3 51 0 1 679 255 214 0 48 chrX 12358442 12358545 -10064282 + (CAA)n Simple_repeat Simple_repeat 1 98 0 1 679 201 260 0 40 chrX 12359381 12359457 -10063370 + (CCG)n Simple_repeat Simple_repeat 1 73 0 1 679 25 31 0 0 chrX 12359884 12359916 -10062911 + AT_rich Low_complexity Low_complexity 1 32 0 1 679 234 128 0 0 chrX 12362416 12362455 -10060372 + (CAT)n Simple_repeat Simple_repeat 3 41 0 1 679 35 24 0 0 chrX 12368194 12368236 -10054591 + AT_rich Low_complexity Low_complexity 1 42 0 1 679 212 170 19 0 chrX 12368324 12368377 -10054450 + (CAA)n Simple_repeat Simple_repeat 1 54 0 1 679 23 0 0 0 chrX 12368957 12368980 -10053847 + AT_rich Low_complexity Low_complexity 1 23 0 1 679 332 59 0 19 chrX 12370979 12371031 -10051796 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 679 31 0 0 0 chrX 12371068 12371099 -10051728 + AT_rich Low_complexity Low_complexity 1 31 0 1 679 22 56 0 0 chrX 12371168 12371204 -10051623 + AT_rich Low_complexity Low_complexity 1 36 0 1 679 27 62 0 0 chrX 12371318 12371366 -10051461 + AT_rich Low_complexity Low_complexity 1 48 0 1 679 243 170 0 0 chrX 12371420 12371467 -10051360 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 679 204 40 0 0 chrX 12371740 12371765 -10051062 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 679 208 233 17 0 chrX 12372120 12372180 -10050647 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 679 222 150 0 0 chrX 12372243 12372283 -10050544 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 679 23 0 0 0 chrX 12375525 12375548 -10047279 + AT_rich Low_complexity Low_complexity 1 23 0 1 679 24 53 0 0 chrX 12375928 12375966 -10046861 + AT_rich Low_complexity Low_complexity 1 38 0 1 679 22 88 0 0 chrX 12376322 12376379 -10046448 + AT_rich Low_complexity Low_complexity 1 57 0 1 679 241 254 0 0 chrX 12376729 12376796 -10046031 + A-rich Low_complexity Low_complexity 1 67 0 1 679 210 164 0 0 chrX 12377068 12377123 -10045704 + CT-rich Low_complexity Low_complexity 2 56 0 1 679 342 0 0 0 chrX 12377402 12377440 -10045387 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 679 221 159 0 0 chrX 12378102 12378146 -10044681 + (CGAAT)n Simple_repeat Simple_repeat 2 45 0 1 679 24 0 0 0 chrX 12378205 12378229 -10044598 + AT_rich Low_complexity Low_complexity 1 24 0 1 679 25 31 0 0 chrX 12378344 12378376 -10044451 + AT_rich Low_complexity Low_complexity 1 32 0 1 679 227 54 0 26 chrX 12380438 12380476 -10042351 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 679 308 94 19 0 chrX 12380513 12380566 -10042261 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 679 243 146 0 0 chrX 12380805 12380846 -10041981 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 679 234 184 0 0 chrX 12381574 12381623 -10041204 + A-rich Low_complexity Low_complexity 1 49 0 1 679 24 32 0 0 chrX 12382122 12382153 -10040674 + AT_rich Low_complexity Low_complexity 1 31 0 1 679 22 0 0 0 chrX 12382248 12382270 -10040557 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 22 0 0 0 chrX 12382289 12382311 -10040516 + AT_rich Low_complexity Low_complexity 1 22 0 1 679 29 47 0 0 chrX 12382630 12382673 -10040154 + AT_rich Low_complexity Low_complexity 1 43 0 1 679 231 146 21 0 chrX 12383351 12383399 -10039428 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 679 23 33 0 0 chrX 12384035 12384065 -10038762 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 4047 186 21 16 chrX 12387135 12388308 -10034519 + SAR_DM Satellite Satellite 1 1178 -287 1 679 41 48 0 0 chrX 12388402 12388464 -10034363 + AT_rich Low_complexity Low_complexity 1 62 0 1 679 24 53 0 0 chrX 12390984 12391022 -10031805 + AT_rich Low_complexity Low_complexity 1 38 0 1 679 21 57 0 0 chrX 12391631 12391666 -10031161 + AT_rich Low_complexity Low_complexity 1 35 0 1 679 213 121 0 0 chrX 12392171 12392204 -10030623 + (A)n Simple_repeat Simple_repeat 1 33 0 1 679 21 0 0 0 chrX 12392673 12392694 -10030133 + AT_rich Low_complexity Low_complexity 1 21 0 1 679 205 97 46 46 chrX 12394406 12394471 -10028356 + A-rich Low_complexity Low_complexity 1 65 0 1 679 203 136 22 22 chrX 12394870 12394915 -10027912 + T-rich Low_complexity Low_complexity 3 47 0 1 679 21 36 0 0 chrX 12395398 12395426 -10027401 + AT_rich Low_complexity Low_complexity 1 28 0 1 679 183 146 0 0 chrX 12397433 12397474 -10025353 + (T)n Simple_repeat Simple_repeat 1 41 0 1 679 261 155 0 0 chrX 12397846 12397904 -10024923 + (GGATG)n Simple_repeat Simple_repeat 2 59 0 1 679 219 245 0 0 chrX 12398112 12398161 -10024666 + (GTATG)n Simple_repeat Simple_repeat 1 49 0 1 679 183 100 0 0 chrX 12401011 12401041 -10021786 + (A)n Simple_repeat Simple_repeat 1 30 0 1 679 187 122 41 0 chrX 12401355 12401404 -10021423 + A-rich Low_complexity Low_complexity 2 52 0 1 679 339 138 0 141 chrX 12402260 12402395 -10020432 + T-rich Low_complexity Low_complexity 3 118 0 1 679 24 0 0 0 chrX 12402633 12402657 -10020170 + AT_rich Low_complexity Low_complexity 1 24 0 1 679 228 241 0 0 chrX 12404733 12404787 -10018040 + (ATG)n Simple_repeat Simple_repeat 2 55 0 1 679 205 120 19 39 chrX 12406779 12406831 -10015996 + (CAG)n Simple_repeat Simple_repeat 3 53 0 1 679 210 162 0 0 chrX 12408158 12408195 -10014632 + T-rich Low_complexity Low_complexity 1 37 0 1 679 285 128 0 0 chrX 12409244 12409291 -10013536 + (CAA)n Simple_repeat Simple_repeat 1 47 0 1 679 25 0 0 0 chrX 12410577 12410602 -10012225 + AT_rich Low_complexity Low_complexity 1 25 0 1 679 469 125 16 24 chrX 12411704 12411827 -10011000 + (TA)n Simple_repeat Simple_repeat 1 122 0 1 679 201 74 0 0 chrX 12411960 12411987 -10010840 + (ATCTG)n Simple_repeat Simple_repeat 3 29 0 1 679 192 40 0 0 chrX 12412327 12412352 -10010475 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 679 201 74 0 0 chrX 12414709 12414736 -10008091 + (ATG)n Simple_repeat Simple_repeat 1 27 0 1 679 264 215 0 0 chrX 12415528 12415593 -10007234 + (TCG)n Simple_repeat Simple_repeat 3 67 0 1 679 239 343 0 0 chrX 12416394 12416493 -10006334 + CT-rich Low_complexity Low_complexity 3 101 0 1 679 265 200 0 146 chrX 12417619 12417742 -10005085 - ROO_I LTR Pao -7513 743 639 1 679 192 125 0 0 chrX 12417900 12417932 -10004895 + (CTG)n Simple_repeat Simple_repeat 1 32 0 1 679 227 206 37 64 chrX 12417949 12418058 -10004769 - ROO_I LTR Pao -7518 738 633 1 679 246 154 25 37 chrX 12418149 12418230 -10004597 - ROO_I LTR Pao -7525 731 652 1 679 2175 189 39 10 chrX 12418603 12419120 -10003707 + SAR_DM Satellite Satellite 456 987 -485 1 679 189 107 0 0 chrX 12420710 12420738 -10002089 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 679 207 69 0 0 chrX 12420926 12420955 -10001872 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 1 679 23 78 0 0 chrX 12421235 12421286 -10001541 + AT_rich Low_complexity Low_complexity 1 51 0 1 679 209 200 0 0 chrX 12421439 12421479 -10001348 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 679 213 65 0 0 chrX 12423194 12423225 -9999602 + (T)n Simple_repeat Simple_repeat 1 31 0 1 679 216 143 0 0 chrX 12424068 12424110 -9998717 + (TTTTTG)n Simple_repeat Simple_repeat 3 44 0 1 679 205 86 29 0 chrX 12424434 12424469 -9998358 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 679 29 28 0 0 chrX 12425306 12425342 -9997485 + AT_rich Low_complexity Low_complexity 1 36 0 1 679 255 61 0 0 chrX 12427085 12427118 -9995709 + (ATTG)n Simple_repeat Simple_repeat 1 33 0 1 679 206 158 26 0 chrX 12427458 12427496 -9995331 + (TATATG)n Simple_repeat Simple_repeat 6 44 0 1 679 23 0 0 0 chrX 12428121 12428144 -9994683 + AT_rich Low_complexity Low_complexity 1 23 0 1 679 33 25 0 0 chrX 12428675 12428715 -9994112 + AT_rich Low_complexity Low_complexity 1 40 0 1 679 206 271 0 0 chrX 12429009 12429057 -9993770 + T-rich Low_complexity Low_complexity 1 48 0 1 679 24 67 0 0 chrX 12430100 12430145 -9992682 + AT_rich Low_complexity Low_complexity 1 45 0 1 679 246 136 0 0 chrX 12430601 12430645 -9992182 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 679 30 0 0 0 chrX 12431329 12431359 -9991468 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 23 33 0 0 chrX 12431466 12431496 -9991331 + AT_rich Low_complexity Low_complexity 1 30 0 1 679 402 74 0 0 chrX 12432846 12432900 -9989927 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 1 679 207 69 0 0 chrX 12433174 12433203 -9989624 + (A)n Simple_repeat Simple_repeat 1 29 0 1 679 209 259 0 33 chrX 12434067 12434127 -9988700 + CT-rich Low_complexity Low_complexity 5 62 0 1 679 705 219 56 23 chrX 12439089 12439304 -9983523 + XDMR_DM Unknown Unknown 136 357 -3 1 679 3099 185 14 21 chrX 12439114 12439833 -9982994 - SAR_DM Satellite Satellite -593 879 166 1 679 446 284 41 46 chrX 12439639 12439857 -9982970 + XDMR Unknown Unknown 1 217 -144 1 679 22 56 0 0 chrX 12441307 12441343 -9981484 + AT_rich Low_complexity Low_complexity 1 36 0 1 679 30 45 0 0 chrX 12442282 12442326 -9980501 + AT_rich Low_complexity Low_complexity 1 44 0 1 679 36 0 0 0 chrX 12445531 12445567 -9977260 + AT_rich Low_complexity Low_complexity 1 36 0 1 679 205 273 0 0 chrX 12446334 12446389 -9976438 + T-rich Low_complexity Low_complexity 2 56 0 1 679 215 253 25 0 chrX 12446976 12447055 -9975772 + A-rich Low_complexity Low_complexity 4 84 0 1 679 189 74 0 0 chrX 12448708 12448735 -9974092 + (A)n Simple_repeat Simple_repeat 1 27 0 1 679 189 107 0 0 chrX 12449307 12449335 -9973492 + (TTTTC)n Simple_repeat Simple_repeat 5 32 0 1 679 207 101 74 25 chrX 12450457 12450579 -9972248 + (TA)n Simple_repeat Simple_repeat 1 128 0 1 679 21 36 0 0 chrX 12450579 12450607 -9972220 + AT_rich Low_complexity Low_complexity 1 28 0 1 679 282 69 114 0 chrX 12450612 12450743 -9972084 + (TA)n Simple_repeat Simple_repeat 2 147 0 1 679 32 26 0 0 chrX 12451729 12451768 -9971059 + AT_rich Low_complexity Low_complexity 1 39 0 1 680 30 0 0 0 chrX 12451966 12451996 -9970831 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 375 134 0 0 chrX 12453267 12453349 -9969478 + (T)n Simple_repeat Simple_repeat 1 82 0 1 680 249 33 0 0 chrX 12455753 12455783 -9967044 + (TGGA)n Simple_repeat Simple_repeat 4 33 0 1 680 198 208 0 0 chrX 12457503 12457556 -9965271 + A-rich Low_complexity Low_complexity 1 53 0 1 680 225 0 0 0 chrX 12457967 12457992 -9964835 + (A)n Simple_repeat Simple_repeat 1 25 0 1 680 207 0 0 0 chrX 12458479 12458502 -9964325 + (TCC)n Simple_repeat Simple_repeat 3 25 0 1 680 30 27 0 0 chrX 12459621 12459658 -9963169 + AT_rich Low_complexity Low_complexity 1 37 0 1 680 21 57 0 0 chrX 12460113 12460148 -9962679 + AT_rich Low_complexity Low_complexity 1 35 0 1 680 261 218 0 60 chrX 12460654 12460737 -9962090 + (TTG)n Simple_repeat Simple_repeat 2 79 0 1 680 209 204 0 0 chrX 12461292 12461341 -9961486 + T-rich Low_complexity Low_complexity 1 49 0 1 680 207 139 0 0 chrX 12461682 12461718 -9961109 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 680 27 0 0 0 chrX 12461891 12461918 -9960909 + AT_rich Low_complexity Low_complexity 1 27 0 1 680 186 191 0 0 chrX 12463795 12463842 -9958985 + T-rich Low_complexity Low_complexity 1 47 0 1 680 198 0 0 0 chrX 12464992 12465014 -9957813 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 680 32 43 0 0 chrX 12465223 12465269 -9957558 + AT_rich Low_complexity Low_complexity 1 46 0 1 680 26 0 0 0 chrX 12465403 12465429 -9957398 + AT_rich Low_complexity Low_complexity 1 26 0 1 680 546 110 59 23 chrX 12465984 12466298 -9956529 + (TTG)n Simple_repeat Simple_repeat 1 325 0 1 680 203 321 14 28 chrX 12466934 12467078 -9955749 + (CCG)n Simple_repeat Simple_repeat 1 142 0 1 680 220 208 0 31 chrX 12467529 12467609 -9955218 + A-rich Low_complexity Low_complexity 1 77 0 1 680 198 0 0 0 chrX 12467898 12467920 -9954907 + (GA)n Simple_repeat Simple_repeat 2 23 0 1 680 223 191 21 0 chrX 12468910 12468957 -9953870 + (CGAAA)n Simple_repeat Simple_repeat 1 48 0 1 680 200 209 0 0 chrX 12468988 12469031 -9953796 + (CGAG)n Simple_repeat Simple_repeat 3 45 0 1 680 204 40 0 0 chrX 12469109 12469134 -9953693 + (CATA)n Simple_repeat Simple_repeat 4 28 0 1 680 250 269 32 11 chrX 12469645 12469739 -9953088 + GA-rich Low_complexity Low_complexity 5 100 0 1 680 206 83 56 0 chrX 12470491 12470527 -9952300 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 680 23 33 0 0 chrX 12471076 12471106 -9951721 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 198 167 0 0 chrX 12476870 12476906 -9945921 + (CACG)n Simple_repeat Simple_repeat 3 38 0 1 680 201 200 55 0 chrX 12477013 12477068 -9945759 + (CACG)n Simple_repeat Simple_repeat 1 58 0 1 680 32 0 0 0 chrX 12477563 12477595 -9945232 + AT_rich Low_complexity Low_complexity 1 32 0 1 680 249 277 0 0 chrX 12485089 12485173 -9937654 + (TATATG)n Simple_repeat Simple_repeat 1 84 0 1 680 233 182 0 18 chrX 12485761 12485817 -9937010 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 680 220 177 16 31 chrX 12486133 12486197 -9936630 + A-rich Low_complexity Low_complexity 3 65 0 1 680 233 318 0 18 chrX 12486754 12486863 -9935964 + (CTG)n Simple_repeat Simple_repeat 2 108 0 1 680 22 56 0 0 chrX 12489964 12490000 -9932827 + AT_rich Low_complexity Low_complexity 1 36 0 1 680 24 77 0 0 chrX 12490625 12490677 -9932150 + AT_rich Low_complexity Low_complexity 1 52 0 1 680 213 214 9 93 chrX 12491417 12491525 -9931302 + (CAG)n Simple_repeat Simple_repeat 3 101 0 1 680 318 252 0 28 chrX 12491637 12491743 -9931084 + (CAG)n Simple_repeat Simple_repeat 1 103 0 1 680 182 191 21 0 chrX 12495587 12495634 -9927193 + (CATATA)n Simple_repeat Simple_repeat 5 52 0 1 680 291 114 0 0 chrX 12495682 12495726 -9927101 + (CAA)n Simple_repeat Simple_repeat 1 44 0 1 680 222 254 0 0 chrX 12498889 12498952 -9923875 + (CAG)n Simple_repeat Simple_repeat 3 65 0 1 680 290 278 11 11 chrX 12500074 12500165 -9922662 + (CAG)n Simple_repeat Simple_repeat 2 92 0 1 680 334 167 70 23 chrX 12500223 12500309 -9922518 + ROO_I LTR Pao 637 726 -7530 1 680 284 48 0 23 chrX 12503022 12503065 -9919762 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 680 203 176 0 0 chrX 12503264 12503298 -9919529 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 680 27 49 0 0 chrX 12503917 12503958 -9918869 + AT_rich Low_complexity Low_complexity 1 41 0 1 680 21 36 0 0 chrX 12511526 12511554 -9911273 + AT_rich Low_complexity Low_complexity 1 28 0 1 680 24 53 0 0 chrX 12511947 12511985 -9910842 + AT_rich Low_complexity Low_complexity 1 38 0 1 680 21 57 0 0 chrX 12512272 12512307 -9910520 + AT_rich Low_complexity Low_complexity 1 35 0 1 680 23 33 0 0 chrX 12512915 12512945 -9909882 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 180 77 0 0 chrX 12513872 12513898 -9908929 + (TGG)n Simple_repeat Simple_repeat 2 27 0 1 680 27 49 0 0 chrX 12515157 12515198 -9907629 + AT_rich Low_complexity Low_complexity 1 41 0 1 680 26 0 0 0 chrX 12516230 12516256 -9906571 + AT_rich Low_complexity Low_complexity 1 26 0 1 680 192 40 0 0 chrX 12516487 12516512 -9906315 + (CAACC)n Simple_repeat Simple_repeat 5 29 0 1 680 37 23 0 0 chrX 12517455 12517499 -9905328 + AT_rich Low_complexity Low_complexity 1 44 0 1 680 264 59 0 0 chrX 12518153 12518187 -9904640 + (CGAAT)n Simple_repeat Simple_repeat 4 37 0 1 680 189 0 0 0 chrX 12520229 12520250 -9902577 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 680 43 20 0 0 chrX 12520887 12520937 -9901890 + AT_rich Low_complexity Low_complexity 1 50 0 1 680 39 60 0 0 chrX 12523806 12523873 -9898954 + AT_rich Low_complexity Low_complexity 1 67 0 1 680 34 55 0 0 chrX 12525088 12525143 -9897684 + AT_rich Low_complexity Low_complexity 1 55 0 1 680 206 171 0 24 chrX 12525915 12525957 -9896870 + T-rich Low_complexity Low_complexity 5 45 0 1 680 197 128 21 0 chrX 12526754 12526801 -9896026 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 680 268 197 0 0 chrX 12527597 12527658 -9895169 + ROO_I LTR Pao 641 701 -7555 1 680 25 31 0 0 chrX 12527902 12527934 -9894893 + AT_rich Low_complexity Low_complexity 1 32 0 1 680 240 255 10 48 chrX 12528577 12528680 -9894147 + A-rich Low_complexity Low_complexity 2 100 0 1 680 24 67 0 0 chrX 12532303 12532348 -9890479 + AT_rich Low_complexity Low_complexity 1 45 0 1 680 297 118 0 0 chrX 12533347 12533398 -9889429 + (CAGC)n Simple_repeat Simple_repeat 3 53 0 1 680 217 231 0 0 chrX 12533437 12533489 -9889338 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 1 680 27 0 0 0 chrX 12534504 12534531 -9888296 + AT_rich Low_complexity Low_complexity 1 27 0 1 680 375 106 0 0 chrX 12534881 12534947 -9887880 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 680 220 185 37 0 chrX 12535348 12535402 -9887425 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 680 204 163 0 23 chrX 12535435 12535479 -9887348 + T-rich Low_complexity Low_complexity 5 47 0 1 680 208 224 0 20 chrX 12536210 12536310 -9886517 + (ATTCG)n Simple_repeat Simple_repeat 4 101 0 1 680 240 170 0 0 chrX 12536403 12536456 -9886371 + CT-rich Low_complexity Low_complexity 2 54 0 1 680 214 213 33 0 chrX 12536728 12536789 -9886038 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 680 270 162 13 51 chrX 12537661 12537739 -9885088 + A-rich Low_complexity Low_complexity 4 78 0 1 680 213 189 0 0 chrX 12538062 12538099 -9884728 + (CGG)n Simple_repeat Simple_repeat 1 37 0 1 680 182 118 0 29 chrX 12540012 12540047 -9882780 + (CCA)n Simple_repeat Simple_repeat 1 34 0 1 680 675 67 0 0 chrX 12540948 12541037 -9881790 + (TA)n Simple_repeat Simple_repeat 1 89 0 1 680 186 43 0 0 chrX 12541169 12541192 -9881635 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 680 30 0 0 0 chrX 12541664 12541694 -9881133 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 288 127 0 0 chrX 12542434 12542489 -9880338 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 680 208 184 41 0 chrX 12542571 12542620 -9880207 + (CAG)n Simple_repeat Simple_repeat 1 51 0 1 680 414 188 0 0 chrX 12542620 12542721 -9880106 + ROO_I LTR Pao 641 741 -7515 1 680 207 318 0 0 chrX 12542800 12542888 -9879939 + (TGG)n Simple_repeat Simple_repeat 2 89 0 1 680 325 238 0 0 chrX 12542894 12542974 -9879853 + ROO_I LTR Pao 654 733 -7523 1 680 219 239 0 0 chrX 12543013 12543080 -9879747 + (TGG)n Simple_repeat Simple_repeat 2 68 0 1 680 302 163 10 30 chrX 12543242 12543343 -9879484 + (CAA)n Simple_repeat Simple_repeat 2 100 0 1 680 280 239 14 0 chrX 12543596 12543667 -9879160 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 680 248 226 0 0 chrX 12543719 12543772 -9879055 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 680 312 181 0 0 chrX 12543896 12543979 -9878848 + CT-rich Low_complexity Low_complexity 2 84 0 1 680 321 281 6 19 chrX 12544023 12544179 -9878648 + CT-rich Low_complexity Low_complexity 1 154 0 1 680 220 191 0 0 chrX 12544323 12544365 -9878462 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 680 255 150 0 0 chrX 12544915 12544975 -9877852 + (TC)n Simple_repeat Simple_repeat 2 61 0 1 680 311 306 13 13 chrX 12545805 12545954 -9876873 + (CGG)n Simple_repeat Simple_repeat 2 150 0 1 680 189 121 0 0 chrX 12545958 12545991 -9876836 + (CAG)n Simple_repeat Simple_repeat 2 34 0 1 680 215 159 11 99 chrX 12547358 12547449 -9875378 + A-rich Low_complexity Low_complexity 6 88 0 1 680 219 125 0 0 chrX 12550905 12550945 -9871882 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 680 230 98 49 0 chrX 12550995 12551036 -9871791 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 1 680 189 107 0 0 chrX 12551123 12551151 -9871676 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 680 281 296 0 0 chrX 12551260 12551385 -9871442 + A-rich Low_complexity Low_complexity 1 125 0 1 680 28 29 0 0 chrX 12551555 12551590 -9871237 + AT_rich Low_complexity Low_complexity 1 35 0 1 680 33 66 0 0 chrX 12551784 12551845 -9870982 + AT_rich Low_complexity Low_complexity 1 61 0 1 680 218 216 26 26 chrX 12554643 12554719 -9868108 + A-rich Low_complexity Low_complexity 3 78 0 1 680 207 244 0 0 chrX 12555784 12555829 -9866998 + (CAG)n Simple_repeat Simple_repeat 3 47 0 1 680 207 234 0 21 chrX 12555844 12555892 -9866935 + (TATG)n Simple_repeat Simple_repeat 4 50 0 1 680 213 204 0 39 chrX 12557605 12557656 -9865171 + CT-rich Low_complexity Low_complexity 2 50 0 1 680 258 261 0 22 chrX 12557692 12557782 -9865045 + GA-rich Low_complexity Low_complexity 1 88 0 1 680 219 189 0 0 chrX 12558549 12558602 -9864225 + (CAA)n Simple_repeat Simple_repeat 1 53 0 1 680 237 33 0 0 chrX 12558994 12559024 -9863803 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1 680 198 171 0 0 chrX 12559119 12559160 -9863667 + (CATA)n Simple_repeat Simple_repeat 4 44 0 1 680 235 250 11 45 chrX 12559397 12559485 -9863342 + (TTG)n Simple_repeat Simple_repeat 2 86 0 1 680 222 231 30 15 chrX 12560257 12560323 -9862504 + T-rich Low_complexity Low_complexity 3 69 0 1 680 31 0 0 0 chrX 12560684 12560715 -9862112 + AT_rich Low_complexity Low_complexity 1 31 0 1 680 216 143 0 0 chrX 12561702 12561744 -9861083 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 680 201 256 0 0 chrX 12562548 12562591 -9860236 + (CATA)n Simple_repeat Simple_repeat 3 45 0 1 680 22 0 0 0 chrX 12563538 12563560 -9859267 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 201 94 0 0 chrX 12564100 12564132 -9858695 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 1 680 214 232 0 42 chrX 12564561 12564633 -9858194 + A-rich Low_complexity Low_complexity 1 69 0 1 680 24 0 0 0 chrX 12565493 12565517 -9857310 + AT_rich Low_complexity Low_complexity 1 24 0 1 680 204 326 0 0 chrX 12565722 12565768 -9857059 + G-rich Low_complexity Low_complexity 3 48 0 1 680 257 65 65 0 chrX 12565861 12565907 -9856920 + (CAATG)n Simple_repeat Simple_repeat 2 50 0 1 680 212 125 42 0 chrX 12566072 12566120 -9856707 + A-rich Low_complexity Low_complexity 3 52 0 1 680 21 71 0 0 chrX 12566787 12566829 -9855998 + AT_rich Low_complexity Low_complexity 1 42 0 1 680 21 36 0 0 chrX 12567357 12567385 -9855442 + AT_rich Low_complexity Low_complexity 1 28 0 1 680 219 36 0 0 chrX 12567944 12567972 -9854855 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 680 31 44 0 0 chrX 12568997 12569042 -9853785 + AT_rich Low_complexity Low_complexity 1 45 0 1 680 24 32 0 0 chrX 12569417 12569448 -9853379 + AT_rich Low_complexity Low_complexity 1 31 0 1 680 210 71 0 0 chrX 12570032 12570060 -9852767 + (TTTCG)n Simple_repeat Simple_repeat 4 31 0 1 680 32 43 0 0 chrX 12570509 12570555 -9852272 + AT_rich Low_complexity Low_complexity 1 46 0 1 680 212 158 0 0 chrX 12571103 12571141 -9851686 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 680 255 114 0 0 chrX 12571208 12571252 -9851575 + (A)n Simple_repeat Simple_repeat 1 44 0 1 680 180 77 0 0 chrX 12571484 12571510 -9851317 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 680 23 0 0 0 chrX 12571657 12571680 -9851147 + AT_rich Low_complexity Low_complexity 1 23 0 1 680 312 70 0 0 chrX 12571928 12571971 -9850856 + (CAG)n Simple_repeat Simple_repeat 1 43 0 1 680 333 296 0 0 chrX 12572661 12572769 -9850058 + ROO_I LTR Pao 642 749 -7507 1 680 203 171 0 0 chrX 12573718 12573759 -9849068 + A-rich Low_complexity Low_complexity 1 41 0 1 680 363 78 0 0 chrX 12574053 12574104 -9848723 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 680 219 69 0 0 chrX 12574201 12574230 -9848597 + (CAAT)n Simple_repeat Simple_repeat 1 29 0 1 680 318 67 0 0 chrX 12574725 12574770 -9848057 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 680 34 0 0 0 chrX 12574828 12574862 -9847965 + AT_rich Low_complexity Low_complexity 1 34 0 1 680 28 48 0 0 chrX 12575706 12575748 -9847079 + AT_rich Low_complexity Low_complexity 1 42 0 1 680 283 156 39 59 chrX 12576318 12576420 -9846407 + A-rich Low_complexity Low_complexity 4 103 0 1 680 3441 209 42 42 chrX 12576916 12578108 -9844719 - SAR_DM Satellite Satellite -449 1192 1 1 680 235 85 0 41 chrX 12578190 12578239 -9844588 + (TTTTG)n Simple_repeat Simple_repeat 3 49 0 1 680 27 0 0 0 chrX 12578255 12578282 -9844545 + AT_rich Low_complexity Low_complexity 1 27 0 1 680 189 94 0 0 chrX 12578658 12578690 -9844137 + (T)n Simple_repeat Simple_repeat 1 32 0 1 680 43 63 0 10 chrX 12579057 12579132 -9843695 + AT_rich Low_complexity Low_complexity 1 75 0 1 680 222 37 0 0 chrX 12579132 12579159 -9843668 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 680 43 63 0 10 chrX 12579159 12579179 -9843648 + AT_rich Low_complexity Low_complexity 1 20 0 1 680 290 138 17 0 chrX 12579302 12579360 -9843467 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 680 26 0 0 0 chrX 12579474 12579500 -9843327 + AT_rich Low_complexity Low_complexity 1 26 0 1 680 195 69 0 0 chrX 12580003 12580032 -9842795 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 680 223 232 29 14 chrX 12580089 12580159 -9842668 + (TATATG)n Simple_repeat Simple_repeat 4 74 0 1 680 387 210 76 0 chrX 12580806 12580925 -9841902 - ROO_I LTR Pao -7498 758 631 1 680 255 202 12 37 chrX 12580993 12581075 -9841752 - ROO_I LTR Pao -7544 712 633 1 680 279 79 0 0 chrX 12581156 12581194 -9841633 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1 680 202 195 0 0 chrX 12581450 12581491 -9841336 + (CCG)n Simple_repeat Simple_repeat 2 42 0 1 680 388 73 0 42 chrX 12582470 12582541 -9840286 + (CTG)n Simple_repeat Simple_repeat 1 68 0 1 680 218 98 0 47 chrX 12582830 12582873 -9839954 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 681 294 29 0 0 chrX 12583662 12583697 -9839130 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 681 201 39 0 0 chrX 12584266 12584292 -9838535 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 681 270 81 0 0 chrX 12584512 12584549 -9838278 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 681 362 100 0 16 chrX 12585065 12585126 -9837701 + (CTG)n Simple_repeat Simple_repeat 3 62 0 1 681 207 0 0 0 chrX 12586148 12586171 -9836656 + (CTG)n Simple_repeat Simple_repeat 2 24 0 1 681 240 35 0 0 chrX 12586242 12586271 -9836556 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 681 465 103 0 0 chrX 12586869 12586937 -9835890 + (CTG)n Simple_repeat Simple_repeat 1 68 0 1 681 200 111 28 0 chrX 12588257 12588293 -9834534 + (CCCA)n Simple_repeat Simple_repeat 2 38 0 1 681 180 70 0 65 chrX 12588729 12588775 -9834052 + (CCCA)n Simple_repeat Simple_repeat 2 44 0 1 681 28 48 0 0 chrX 12589063 12589105 -9833722 + AT_rich Low_complexity Low_complexity 1 42 0 1 681 23 0 0 0 chrX 12589149 12589172 -9833655 + AT_rich Low_complexity Low_complexity 1 23 0 1 681 23 54 0 0 chrX 12589254 12589291 -9833536 + AT_rich Low_complexity Low_complexity 1 37 0 1 681 21 0 0 0 chrX 12589447 12589468 -9833359 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 228 161 48 0 chrX 12590065 12590127 -9832700 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 681 21 36 0 0 chrX 12590289 12590317 -9832510 + AT_rich Low_complexity Low_complexity 1 28 0 1 681 31 26 0 0 chrX 12590619 12590657 -9832170 + AT_rich Low_complexity Low_complexity 1 38 0 1 681 201 94 0 0 chrX 12590823 12590855 -9831972 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 681 240 35 0 0 chrX 12591248 12591277 -9831550 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 681 216 0 0 0 chrX 12591979 12592003 -9830824 + (T)n Simple_repeat Simple_repeat 1 24 0 1 681 186 43 0 0 chrX 12592323 12592346 -9830481 + (CGAGT)n Simple_repeat Simple_repeat 3 25 0 1 681 290 231 0 13 chrX 12593458 12593537 -9829290 + GA-rich Low_complexity Low_complexity 2 79 0 1 681 183 100 0 0 chrX 12593719 12593749 -9829078 + (TCTCCC)n Simple_repeat Simple_repeat 3 32 0 1 681 324 164 0 0 chrX 12596301 12596368 -9826459 + (TTG)n Simple_repeat Simple_repeat 1 67 0 1 681 198 0 0 0 chrX 12597118 12597140 -9825687 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 681 222 62 0 0 chrX 12597263 12597295 -9825532 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 681 314 80 20 0 chrX 12597426 12597476 -9825351 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 681 218 0 94 0 chrX 12597564 12597596 -9825231 + (AATTG)n Simple_repeat Simple_repeat 1 35 0 1 681 234 0 0 0 chrX 12598594 12598620 -9824207 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 681 186 43 0 0 chrX 12599176 12599199 -9823628 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 681 218 129 65 0 chrX 12599587 12599649 -9823178 + (TAA)n Simple_repeat Simple_repeat 3 68 0 1 681 234 136 0 0 chrX 12600163 12600207 -9822620 + (T)n Simple_repeat Simple_repeat 1 44 0 1 681 216 0 0 0 chrX 12600252 12600276 -9822551 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 681 276 53 0 0 chrX 12600564 12600602 -9822225 + (CAT)n Simple_repeat Simple_repeat 1 38 0 1 681 21 0 0 0 chrX 12600845 12600866 -9821961 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 495 118 0 0 chrX 12602480 12602556 -9820271 + (CAG)n Simple_repeat Simple_repeat 2 77 0 1 681 197 33 0 32 chrX 12602690 12602721 -9820106 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 681 21 0 0 0 chrX 12603185 12603206 -9819621 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 22 0 0 0 chrX 12603213 12603235 -9819592 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 201 74 0 0 chrX 12603630 12603657 -9819170 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 681 195 42 0 0 chrX 12605212 12605236 -9817591 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 681 212 316 0 0 chrX 12605711 12605790 -9817037 + (CTG)n Simple_repeat Simple_repeat 3 81 0 1 681 384 82 0 0 chrX 12605872 12605933 -9816894 + (ATG)n Simple_repeat Simple_repeat 1 61 0 1 681 226 281 0 0 chrX 12605935 12605992 -9816835 + (CTG)n Simple_repeat Simple_repeat 2 58 0 1 681 405 70 0 0 chrX 12607870 12607927 -9814900 + (CTG)n Simple_repeat Simple_repeat 1 57 0 1 681 351 132 0 0 chrX 12608058 12608126 -9814701 + (CTG)n Simple_repeat Simple_repeat 3 70 0 1 681 195 100 0 0 chrX 12608219 12608249 -9814578 + (CTG)n Simple_repeat Simple_repeat 3 32 0 1 681 234 62 0 0 chrX 12608444 12608476 -9814351 + (CTG)n Simple_repeat Simple_repeat 1 32 0 1 681 516 72 0 0 chrX 12608731 12608800 -9814027 + (CTG)n Simple_repeat Simple_repeat 1 69 0 1 681 228 193 18 0 chrX 12608969 12609026 -9813801 - ROO_I LTR Pao -7531 725 668 1 681 394 121 0 32 chrX 12609048 12609142 -9813685 - ROO_I LTR Pao -7525 731 641 1 681 230 198 34 51 chrX 12609187 12609304 -9813523 - ROO_I LTR Pao -7513 743 629 1 681 198 91 0 0 chrX 12610940 12610973 -9811854 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 681 26 88 0 0 chrX 12611519 12611587 -9811240 + AT_rich Low_complexity Low_complexity 1 68 0 1 681 248 264 54 11 chrX 12612985 12613077 -9809750 + OSVALDO_LTR LTR Gypsy 11 106 -1090 1 681 22 0 0 0 chrX 12613904 12613926 -9808901 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 285 118 0 0 chrX 12614258 12614309 -9808518 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 681 240 35 0 0 chrX 12615290 12615319 -9807508 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 681 200 244 0 0 chrX 12615539 12615580 -9807247 + A-rich Low_complexity Low_complexity 1 41 0 1 681 435 38 0 0 chrX 12617677 12617730 -9805097 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 681 241 125 36 0 chrX 12617906 12617962 -9804865 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 681 198 0 0 0 chrX 12618483 12618505 -9804322 + (TATG)n Simple_repeat Simple_repeat 4 25 0 1 681 243 0 0 0 chrX 12619209 12619236 -9803591 + (T)n Simple_repeat Simple_repeat 1 27 0 1 681 236 137 0 19 chrX 12620915 12620967 -9801860 + A-rich Low_complexity Low_complexity 4 54 0 1 681 25 31 0 0 chrX 12621576 12621608 -9801219 + AT_rich Low_complexity Low_complexity 1 32 0 1 681 189 0 0 0 chrX 12621909 12621930 -9800897 + (A)n Simple_repeat Simple_repeat 1 21 0 1 681 189 94 0 0 chrX 12622109 12622141 -9800686 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 681 222 37 0 0 chrX 12622190 12622217 -9800610 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 681 28 29 0 0 chrX 12622592 12622627 -9800200 + AT_rich Low_complexity Low_complexity 1 35 0 1 681 309 155 0 0 chrX 12623478 12623536 -9799291 + (CAT)n Simple_repeat Simple_repeat 3 60 0 1 681 260 169 13 25 chrX 12625025 12625104 -9797723 - ROO_I LTR Pao -7544 712 635 1 681 345 154 22 0 chrX 12625152 12625243 -9797584 - ROO_I LTR Pao -7524 732 640 1 681 238 151 0 0 chrX 12625255 12625308 -9797519 - ROO_I LTR Pao -7513 743 691 1 681 382 185 0 0 chrX 12625321 12625413 -9797414 - ROO_I LTR Pao -7524 732 641 1 681 251 190 35 0 chrX 12625533 12625591 -9797236 + (TTG)n Simple_repeat Simple_repeat 1 60 0 1 681 22 0 0 0 chrX 12625809 12625831 -9796996 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 227 204 0 0 chrX 12626000 12626049 -9796778 + T-rich Low_complexity Low_complexity 1 49 0 1 681 195 42 0 0 chrX 12626166 12626190 -9796637 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 681 213 149 21 0 chrX 12626628 12626675 -9796152 + A-rich Low_complexity Low_complexity 4 51 0 1 681 200 231 0 0 chrX 12627674 12627713 -9795114 + (CATATA)n Simple_repeat Simple_repeat 3 41 0 1 681 286 299 37 0 chrX 12627934 12628041 -9794786 + (CATATA)n Simple_repeat Simple_repeat 4 114 0 1 681 22 0 0 0 chrX 12628887 12628909 -9793918 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 25 75 0 0 chrX 12629061 12629114 -9793713 + AT_rich Low_complexity Low_complexity 1 53 0 1 681 207 186 0 0 chrX 12630620 12630663 -9792164 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 681 211 228 22 0 chrX 12630867 12630959 -9791868 + (CATA)n Simple_repeat Simple_repeat 3 96 0 1 681 180 111 0 0 chrX 12631248 12631275 -9791552 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 681 22 70 0 0 chrX 12632297 12632340 -9790487 + AT_rich Low_complexity Low_complexity 1 43 0 1 681 23 0 0 0 chrX 12634243 12634266 -9788561 + AT_rich Low_complexity Low_complexity 1 23 0 1 681 200 184 0 20 chrX 12634551 12634601 -9788226 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 681 24 32 0 0 chrX 12635246 12635277 -9787550 + AT_rich Low_complexity Low_complexity 1 31 0 1 681 33 25 0 0 chrX 12635703 12635743 -9787084 + AT_rich Low_complexity Low_complexity 1 40 0 1 681 29 0 0 0 chrX 12635766 12635795 -9787032 + AT_rich Low_complexity Low_complexity 1 29 0 1 681 204 97 0 0 chrX 12635839 12635870 -9786957 + (T)n Simple_repeat Simple_repeat 1 31 0 1 681 185 178 22 0 chrX 12635869 12635914 -9786913 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 681 189 180 0 0 chrX 12636181 12636231 -9786596 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 681 21 0 0 0 chrX 12636264 12636285 -9786542 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 238 209 42 42 chrX 12637466 12637561 -9785266 + T-rich Low_complexity Low_complexity 6 100 0 1 681 21 0 0 0 chrX 12638304 12638325 -9784502 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 28 29 0 0 chrX 12639121 12639156 -9783671 + AT_rich Low_complexity Low_complexity 1 35 0 1 681 370 329 15 23 chrX 12640470 12640731 -9782096 + HOBO DNA hAT 533 791 -2225 1 681 202 150 0 24 chrX 12642023 12642064 -9780763 + CT-rich Low_complexity Low_complexity 1 40 0 1 681 32 0 0 0 chrX 12642448 12642480 -9780347 + AT_rich Low_complexity Low_complexity 1 32 0 1 681 183 129 0 0 chrX 12643068 12643099 -9779728 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 681 207 69 0 0 chrX 12643279 12643308 -9779519 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 681 25 65 0 0 chrX 12643470 12643516 -9779311 + AT_rich Low_complexity Low_complexity 1 46 0 1 681 24 32 0 0 chrX 12643601 12643632 -9779195 + AT_rich Low_complexity Low_complexity 1 31 0 1 681 189 147 0 0 chrX 12643686 12643720 -9779107 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 681 212 184 20 0 chrX 12643913 12643962 -9778865 + (TATG)n Simple_repeat Simple_repeat 3 52 0 1 681 21 0 0 0 chrX 12645095 12645116 -9777711 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 27 0 0 0 chrX 12645169 12645196 -9777631 + AT_rich Low_complexity Low_complexity 1 27 0 1 681 205 309 32 16 chrX 12645710 12645835 -9776992 + (CATA)n Simple_repeat Simple_repeat 1 127 0 1 681 201 74 0 0 chrX 12646102 12646129 -9776698 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 681 198 0 0 0 chrX 12646739 12646761 -9776066 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 681 195 114 0 0 chrX 12648004 12648039 -9774788 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 681 221 266 16 0 chrX 12648295 12648359 -9774468 + GA-rich Low_complexity Low_complexity 2 66 0 1 681 219 152 0 0 chrX 12648410 12648456 -9774371 + (CAA)n Simple_repeat Simple_repeat 3 48 0 1 681 26 0 0 0 chrX 12648580 12648606 -9774221 + AT_rich Low_complexity Low_complexity 1 26 0 1 681 186 43 0 0 chrX 12648734 12648757 -9774070 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 681 306 0 0 0 chrX 12648890 12648924 -9773903 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 681 225 185 0 53 chrX 12649164 12649221 -9773606 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 681 21 82 0 0 chrX 12650222 12650271 -9772556 + AT_rich Low_complexity Low_complexity 1 49 0 1 681 1255 194 42 3 chrX 12651418 12651702 -9771125 - SAR_DM Satellite Satellite -604 868 574 1 681 21 36 0 0 chrX 12651749 12651777 -9771050 + AT_rich Low_complexity Low_complexity 1 28 0 1 681 201 74 0 0 chrX 12653656 12653683 -9769144 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 1 681 222 160 0 0 chrX 12654523 12654573 -9768254 + CT-rich Low_complexity Low_complexity 1 50 0 1 681 218 217 0 0 chrX 12654725 12654771 -9768056 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 681 219 69 0 0 chrX 12655077 12655106 -9767721 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 1 681 23 0 0 0 chrX 12658158 12658181 -9764646 + AT_rich Low_complexity Low_complexity 1 23 0 1 681 37 0 0 0 chrX 12658478 12658515 -9764312 + AT_rich Low_complexity Low_complexity 1 37 0 1 681 67 34 0 0 chrX 12658959 12659047 -9763780 + AT_rich Low_complexity Low_complexity 1 88 0 1 681 200 156 44 0 chrX 12659375 12659420 -9763407 + (TCG)n Simple_repeat Simple_repeat 1 47 0 1 681 211 125 0 24 chrX 12659693 12659734 -9763093 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 681 33 56 0 0 chrX 12660064 12660118 -9762709 + AT_rich Low_complexity Low_complexity 1 54 0 1 681 211 185 37 0 chrX 12662458 12662512 -9760315 + (TTTAA)n Simple_repeat Simple_repeat 4 59 0 1 681 180 77 0 0 chrX 12663114 12663140 -9759687 + (T)n Simple_repeat Simple_repeat 1 26 0 1 681 4340 45 118 39 chrX 12664944 12665616 -9757211 + PROTOP_A DNA P 381 1105 0 1 681 21 0 0 0 chrX 12666395 12666416 -9756411 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 22 0 0 0 chrX 12667459 12667481 -9755346 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 23 0 0 0 chrX 12667615 12667638 -9755189 + AT_rich Low_complexity Low_complexity 1 23 0 1 681 237 83 0 0 chrX 12669060 12669096 -9753731 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 681 25 0 0 0 chrX 12669264 12669289 -9753538 + AT_rich Low_complexity Low_complexity 1 25 0 1 681 188 86 29 0 chrX 12670058 12670093 -9752734 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 681 21 0 0 0 chrX 12670583 12670604 -9752223 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 228 67 0 0 chrX 12671853 12671883 -9750944 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 1 681 22 0 0 0 chrX 12672206 12672228 -9750599 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 21 0 0 0 chrX 12672625 12672646 -9750181 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 186 43 0 0 chrX 12673890 12673913 -9748914 + (A)n Simple_repeat Simple_repeat 1 23 0 1 681 180 77 0 0 chrX 12675364 12675390 -9747437 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 681 22 35 0 0 chrX 12676195 12676224 -9746603 + AT_rich Low_complexity Low_complexity 1 29 0 1 681 246 213 0 32 chrX 12677263 12677326 -9745501 + (TTG)n Simple_repeat Simple_repeat 3 63 0 1 681 244 204 34 0 chrX 12677370 12677458 -9745369 - ROO_I LTR Pao -7523 733 643 1 681 180 77 0 0 chrX 12678222 12678248 -9744579 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 681 243 103 0 0 chrX 12678353 12678392 -9744435 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 681 183 42 0 0 chrX 12678435 12678459 -9744368 + (T)n Simple_repeat Simple_repeat 1 24 0 1 681 293 68 23 0 chrX 12678772 12678816 -9744011 + (CTG)n Simple_repeat Simple_repeat 3 47 0 1 681 231 133 0 0 chrX 12679687 12679732 -9743095 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 681 351 96 0 0 chrX 12680082 12680134 -9742693 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 681 207 69 0 0 chrX 12680201 12680230 -9742597 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 681 240 194 48 0 chrX 12680499 12680561 -9742266 + (TATG)n Simple_repeat Simple_repeat 2 66 0 1 681 189 178 0 0 chrX 12682917 12682962 -9739865 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 681 223 197 26 26 chrX 12682983 12683061 -9739766 + T-rich Low_complexity Low_complexity 6 83 0 1 681 488 81 14 0 chrX 12683581 12683655 -9739172 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 681 286 191 27 45 chrX 12684420 12684530 -9738297 + ROO_I LTR Pao 637 744 -7512 1 681 234 286 0 0 chrX 12685170 12685233 -9737594 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 681 184 111 0 43 chrX 12685246 12685293 -9737534 + A-rich Low_complexity Low_complexity 3 47 0 1 681 288 111 0 0 chrX 12685666 12685720 -9737107 + (TCC)n Simple_repeat Simple_repeat 3 56 0 1 681 27 29 0 0 chrX 12687496 12687530 -9735297 + AT_rich Low_complexity Low_complexity 1 34 0 1 681 201 39 0 0 chrX 12687838 12687864 -9734963 + (TCC)n Simple_repeat Simple_repeat 1 26 0 1 681 21 36 0 0 chrX 12688060 12688088 -9734739 + AT_rich Low_complexity Low_complexity 1 28 0 1 681 4556 171 13 22 chrX 12688696 12691993 -9730834 - SAR_DM Satellite Satellite -861 3265 1 1 681 447 209 0 0 chrX 12691900 12692005 -9730822 + ARS406_DM Unknown Unknown 1 105 -248 1 681 22 35 0 0 chrX 12692728 12692757 -9730070 + AT_rich Low_complexity Low_complexity 1 29 0 1 681 26 0 0 0 chrX 12693072 12693098 -9729729 + AT_rich Low_complexity Low_complexity 1 26 0 1 681 216 0 0 0 chrX 12693566 12693590 -9729237 + (ATG)n Simple_repeat Simple_repeat 3 26 0 1 681 23 33 0 0 chrX 12694975 12695005 -9727822 + AT_rich Low_complexity Low_complexity 1 30 0 1 681 198 0 0 0 chrX 12698801 12698823 -9724004 + (CAATA)n Simple_repeat Simple_repeat 4 25 0 1 681 240 35 0 0 chrX 12699120 12699149 -9723678 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 681 22 56 0 0 chrX 12701264 12701300 -9721527 + AT_rich Low_complexity Low_complexity 1 36 0 1 681 554 51 0 13 chrX 12702535 12702614 -9720213 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 681 184 100 24 24 chrX 12703192 12703233 -9719594 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 681 253 174 33 44 chrX 12704254 12704344 -9718483 + T-rich Low_complexity Low_complexity 4 92 0 1 681 186 118 0 0 chrX 12704653 12704687 -9718140 + (T)n Simple_repeat Simple_repeat 1 34 0 1 681 198 0 0 0 chrX 12705218 12705240 -9717587 + (T)n Simple_repeat Simple_repeat 1 22 0 1 681 276 120 0 0 chrX 12705426 12705476 -9717351 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 681 224 119 16 63 chrX 12706056 12706119 -9716708 + (TTATA)n Simple_repeat Simple_repeat 4 63 0 1 681 407 53 0 34 chrX 12706122 12706181 -9716646 - DNAREP1_DM LINE Penelope -508 86 30 1 681 25 0 0 0 chrX 12708959 12708984 -9713843 + AT_rich Low_complexity Low_complexity 1 25 0 1 681 21 0 0 0 chrX 12709036 12709057 -9713770 + AT_rich Low_complexity Low_complexity 1 21 0 1 681 264 59 0 0 chrX 12711539 12711573 -9711254 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 681 30 0 0 0 chrX 12712470 12712500 -9710327 + AT_rich Low_complexity Low_complexity 1 30 0 1 681 284 188 0 14 chrX 12713048 12713118 -9709709 + (ATG)n Simple_repeat Simple_repeat 1 69 0 1 681 219 232 0 35 chrX 12713289 12713347 -9709480 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 1 682 183 42 0 0 chrX 12714214 12714238 -9708589 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 682 24 32 0 0 chrX 12714600 12714631 -9708196 + AT_rich Low_complexity Low_complexity 1 31 0 1 682 198 103 0 0 chrX 12715099 12715128 -9707699 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 682 22 0 0 0 chrX 12715990 12716012 -9706815 + AT_rich Low_complexity Low_complexity 1 22 0 1 682 38 22 0 0 chrX 12716321 12716366 -9706461 + AT_rich Low_complexity Low_complexity 1 45 0 1 682 31 0 0 0 chrX 12716901 12716932 -9705895 + AT_rich Low_complexity Low_complexity 1 31 0 1 682 180 0 0 0 chrX 12717136 12717156 -9705671 + (T)n Simple_repeat Simple_repeat 1 20 0 1 682 203 179 0 0 chrX 12717460 12717499 -9705328 + A-rich Low_complexity Low_complexity 1 39 0 1 682 201 214 0 35 chrX 12718211 12718269 -9704558 + A-rich Low_complexity Low_complexity 4 59 0 1 682 249 33 0 0 chrX 12720767 12720797 -9702030 + (ATG)n Simple_repeat Simple_repeat 1 30 0 1 682 25 65 0 0 chrX 12721067 12721113 -9701714 + AT_rich Low_complexity Low_complexity 1 46 0 1 682 195 114 0 0 chrX 12722392 12722427 -9700400 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 682 208 154 19 19 chrX 12724387 12724440 -9698387 + (TTG)n Simple_repeat Simple_repeat 1 53 0 1 682 195 69 0 0 chrX 12724449 12724478 -9698349 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 682 282 244 0 34 chrX 12724754 12724906 -9697921 + (CTG)n Simple_repeat Simple_repeat 1 146 0 1 682 291 169 0 53 chrX 12725147 12725222 -9697605 - ROO_I LTR Pao -7535 721 651 1 682 206 347 10 10 chrX 12725349 12725445 -9697382 + (CTG)n Simple_repeat Simple_repeat 1 96 0 1 682 282 129 18 73 chrX 12725540 12725649 -9697178 - ROO_I LTR Pao -7513 743 641 1 682 2401 187 29 15 chrX 12726683 12727297 -9695530 + SAR_DM Satellite Satellite 259 881 -591 1 682 803 206 10 0 chrX 12727131 12727335 -9695492 - XDMR Unknown Unknown 0 361 156 1 682 396 40 0 0 chrX 12728220 12728270 -9694557 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 682 284 111 0 53 chrX 12729460 12729536 -9693291 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 682 26 50 0 0 chrX 12730078 12730118 -9692709 + AT_rich Low_complexity Low_complexity 1 40 0 1 682 21 36 0 0 chrX 12730346 12730374 -9692453 + AT_rich Low_complexity Low_complexity 1 28 0 1 682 214 162 0 0 chrX 12730405 12730442 -9692385 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 682 282 138 0 0 chrX 12730975 12731033 -9691794 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 682 237 108 0 0 chrX 12731157 12731194 -9691633 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 682 192 40 0 0 chrX 12732029 12732054 -9690773 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 682 216 184 0 0 chrX 12732118 12732156 -9690671 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 682 192 40 0 0 chrX 12732214 12732239 -9690588 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 682 266 138 0 17 chrX 12732636 12732695 -9690132 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 682 279 93 0 0 chrX 12733045 12733088 -9689739 + (ACTG)n Simple_repeat Simple_repeat 1 43 0 1 682 190 29 57 29 chrX 12733335 12733370 -9689457 + (TTATA)n Simple_repeat Simple_repeat 2 37 0 1 682 285 75 0 0 chrX 12734023 12734063 -9688764 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 682 237 132 0 0 chrX 12734237 12734275 -9688552 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 682 216 0 0 0 chrX 12735282 12735306 -9687521 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 682 21 0 0 0 chrX 12735935 12735956 -9686871 + AT_rich Low_complexity Low_complexity 1 21 0 1 682 312 158 0 0 chrX 12736022 12736079 -9686748 + (CACG)n Simple_repeat Simple_repeat 2 58 0 1 682 186 43 0 0 chrX 12740625 12740648 -9682179 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 682 347 202 0 11 chrX 12740734 12740824 -9682003 + (ACTG)n Simple_repeat Simple_repeat 4 92 0 1 682 24 85 0 0 chrX 12741160 12741219 -9681608 + AT_rich Low_complexity Low_complexity 1 59 0 1 682 28 0 0 0 chrX 12741948 12741976 -9680851 + AT_rich Low_complexity Low_complexity 1 28 0 1 682 189 175 0 0 chrX 12743267 12743307 -9679520 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 682 23 0 0 0 chrX 12744528 12744551 -9678276 + AT_rich Low_complexity Low_complexity 1 23 0 1 682 259 243 37 46 chrX 12746088 12746196 -9676631 + T-rich Low_complexity Low_complexity 1 107 0 1 682 180 0 0 0 chrX 12747953 12747973 -9674854 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 682 22 35 0 0 chrX 12749397 12749426 -9673401 + AT_rich Low_complexity Low_complexity 1 29 0 1 682 212 188 21 0 chrX 12752328 12752376 -9670451 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 682 24 0 0 0 chrX 12754205 12754229 -9668598 + AT_rich Low_complexity Low_complexity 1 24 0 1 682 233 188 14 68 chrX 12755084 12755158 -9667669 + A-rich Low_complexity Low_complexity 1 70 0 1 682 183 100 0 0 chrX 12755868 12755898 -9666929 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 682 28 29 0 0 chrX 12757492 12757527 -9665300 + AT_rich Low_complexity Low_complexity 1 35 0 1 682 222 37 0 0 chrX 12757739 12757766 -9665061 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 682 236 206 48 0 chrX 12757968 12758031 -9664796 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 682 213 132 0 0 chrX 12759644 12759682 -9663145 + (TATG)n Simple_repeat Simple_repeat 4 41 0 1 682 192 40 0 0 chrX 12760587 12760612 -9662215 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 682 210 71 0 0 chrX 12761430 12761458 -9661369 + (CAG)n Simple_repeat Simple_repeat 1 28 0 1 682 217 51 51 0 chrX 12762555 12762594 -9660233 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1 682 809 96 0 8 chrX 12765021 12765147 -9657680 + (CAGT)n Simple_repeat Simple_repeat 2 126 0 1 682 201 167 0 0 chrX 12765180 12765216 -9657611 + T-rich Low_complexity Low_complexity 1 36 0 1 682 21 0 0 0 chrX 12766861 12766882 -9655945 + AT_rich Low_complexity Low_complexity 1 21 0 1 682 309 100 0 0 chrX 12767040 12767090 -9655737 + (TAA)n Simple_repeat Simple_repeat 3 52 0 1 682 21 0 0 0 chrX 12767619 12767640 -9655187 + AT_rich Low_complexity Low_complexity 1 21 0 1 682 22 70 0 0 chrX 12768039 12768082 -9654745 + AT_rich Low_complexity Low_complexity 1 43 0 1 682 23 0 0 0 chrX 12768408 12768431 -9654396 + AT_rich Low_complexity Low_complexity 1 23 0 1 682 232 27 54 0 chrX 12769539 12769576 -9653251 + (CAAAAA)n Simple_repeat Simple_repeat 1 39 0 1 682 188 200 17 0 chrX 12770705 12770765 -9652062 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 682 30 0 0 0 chrX 12771057 12771087 -9651740 + AT_rich Low_complexity Low_complexity 1 30 0 1 682 330 98 0 0 chrX 12771524 12771575 -9651252 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 682 241 237 0 0 chrX 12771781 12771840 -9650987 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 682 222 62 0 0 chrX 12773991 12774023 -9648804 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 682 219 146 0 0 chrX 12774222 12774263 -9648564 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 682 201 39 0 0 chrX 12775277 12775303 -9647524 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 682 21 0 0 0 chrX 12775918 12775939 -9646888 + AT_rich Low_complexity Low_complexity 1 21 0 1 682 183 129 0 0 chrX 12776020 12776051 -9646776 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 682 21 0 0 0 chrX 12776946 12776967 -9645860 + AT_rich Low_complexity Low_complexity 1 21 0 1 682 210 143 0 0 chrX 12777250 12777285 -9645542 + (CGAAT)n Simple_repeat Simple_repeat 3 37 0 1 682 254 254 0 40 chrX 12777343 12777417 -9645410 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 682 211 130 18 18 chrX 12777585 12777640 -9645187 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 682 28 29 0 0 chrX 12777999 12778034 -9644793 + AT_rich Low_complexity Low_complexity 1 35 0 1 682 23 0 0 0 chrX 12778266 12778289 -9644538 + AT_rich Low_complexity Low_complexity 1 23 0 1 682 186 133 0 0 chrX 12778562 12778592 -9644235 + (CGGA)n Simple_repeat Simple_repeat 3 32 0 1 682 23 0 0 0 chrX 12778977 12779000 -9643827 + AT_rich Low_complexity Low_complexity 1 23 0 1 682 252 0 0 0 chrX 12779188 12779216 -9643611 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1 682 201 74 0 0 chrX 12781249 12781276 -9641551 + (A)n Simple_repeat Simple_repeat 1 27 0 1 682 249 119 0 0 chrX 12781966 12782008 -9640819 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 682 225 65 0 0 chrX 12783242 12783273 -9639554 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 682 30 27 0 0 chrX 12783743 12783780 -9639047 + AT_rich Low_complexity Low_complexity 1 37 0 1 682 207 0 0 0 chrX 12784238 12784261 -9638566 + (T)n Simple_repeat Simple_repeat 1 23 0 1 682 200 118 0 29 chrX 12785845 12785880 -9636947 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 1 682 291 175 0 0 chrX 12785986 12786043 -9636784 + (CAT)n Simple_repeat Simple_repeat 2 58 0 1 682 219 88 0 0 chrX 12786179 12786213 -9636614 + (GTATG)n Simple_repeat Simple_repeat 5 38 0 1 682 232 243 27 36 chrX 12786472 12786583 -9636244 + A-rich Low_complexity Low_complexity 5 114 0 1 682 290 132 19 0 chrX 12787132 12787185 -9635642 + (CAA)n Simple_repeat Simple_repeat 3 56 0 1 682 205 195 0 0 chrX 12787583 12787624 -9635203 + T-rich Low_complexity Low_complexity 1 41 0 1 682 237 209 0 0 chrX 12789709 12789776 -9633051 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 682 24 0 0 0 chrX 12790750 12790774 -9632053 + AT_rich Low_complexity Low_complexity 1 24 0 1 682 237 237 34 0 chrX 12797293 12797352 -9625475 + (CACG)n Simple_repeat Simple_repeat 3 63 0 1 682 261 57 0 0 chrX 12799480 12799515 -9623312 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 682 21 36 0 0 chrX 12800302 12800330 -9622497 + AT_rich Low_complexity Low_complexity 1 28 0 1 682 225 0 0 0 chrX 12802120 12802145 -9620682 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 682 40 0 0 0 chrX 12806764 12806804 -9616023 + AT_rich Low_complexity Low_complexity 1 40 0 1 682 30 45 0 0 chrX 12806819 12806863 -9615964 + AT_rich Low_complexity Low_complexity 1 44 0 1 682 210 171 0 0 chrX 12806929 12806970 -9615857 + (TATG)n Simple_repeat Simple_repeat 4 44 0 1 682 33 103 0 0 chrX 12807860 12807977 -9614850 + AT_rich Low_complexity Low_complexity 1 117 0 1 682 267 282 0 14 chrX 12808335 12808407 -9614420 + (CATA)n Simple_repeat Simple_repeat 1 71 0 1 682 21 57 0 0 chrX 12809366 12809401 -9613426 + AT_rich Low_complexity Low_complexity 1 35 0 1 682 273 146 0 0 chrX 12809934 12809982 -9612845 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 682 36 40 0 0 chrX 12810176 12810226 -9612601 + AT_rich Low_complexity Low_complexity 1 50 0 1 682 25 31 0 0 chrX 12810339 12810371 -9612456 + AT_rich Low_complexity Low_complexity 1 32 0 1 682 315 113 0 0 chrX 12810658 12810711 -9612116 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 682 216 0 0 0 chrX 12811374 12811398 -9611429 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 682 432 126 0 0 chrX 12811648 12811735 -9611092 + (CAA)n Simple_repeat Simple_repeat 2 88 0 1 682 264 30 0 0 chrX 12812836 12812869 -9609958 + (TAA)n Simple_repeat Simple_repeat 3 35 0 1 682 183 80 0 0 chrX 12812933 12812958 -9609869 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 682 222 105 0 0 chrX 12813133 12813171 -9609656 + (A)n Simple_repeat Simple_repeat 1 38 0 1 682 297 159 0 0 chrX 12814964 12815027 -9607800 + CT-rich Low_complexity Low_complexity 2 64 0 1 682 231 214 0 0 chrX 12815169 12815211 -9607616 + (CCA)n Simple_repeat Simple_repeat 1 42 0 1 682 180 0 0 0 chrX 12816230 12816250 -9606577 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 682 21 0 0 0 chrX 12817771 12817792 -9605035 + AT_rich Low_complexity Low_complexity 1 21 0 1 682 183 42 0 0 chrX 12818595 12818619 -9604208 + (A)n Simple_repeat Simple_repeat 1 24 0 1 682 186 220 0 0 chrX 12819451 12819510 -9603317 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 682 207 69 0 0 chrX 12819819 12819848 -9602979 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 682 24 32 0 0 chrX 12820005 12820036 -9602791 + AT_rich Low_complexity Low_complexity 1 31 0 1 682 189 0 0 0 chrX 12820313 12820334 -9602493 + (GA)n Simple_repeat Simple_repeat 1 21 0 1 682 180 0 0 0 chrX 12821731 12821751 -9601076 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 682 35 41 0 0 chrX 12822323 12822372 -9600455 + AT_rich Low_complexity Low_complexity 1 49 0 1 682 3525 193 12 21 chrX 12822458 12823322 -9599505 - SAR_DM Satellite Satellite -494 856 1 1 682 242 212 15 0 chrX 12823898 12823964 -9598863 + (CCCA)n Simple_repeat Simple_repeat 1 67 0 1 682 26 74 0 0 chrX 12824479 12824533 -9598294 + AT_rich Low_complexity Low_complexity 1 54 0 1 682 2316 8 0 0 chrX 12824665 12824931 -9597896 - DMLTR5 LTR Gypsy 0 266 1 1 682 48467 0 1 0 chrX 12824931 12830489 -9592338 - HMSBEAGLE_I LTR Gypsy 0 6529 969 1 682 974 29 52 12 chrX 12830489 12830661 -9592166 + (TAA)n Simple_repeat Simple_repeat 1 179 0 1 682 6580 2 0 0 chrX 12830661 12831457 -9591370 - HMSBEAGLE_I LTR Gypsy -5733 796 1 1 682 2316 8 0 0 chrX 12831456 12831722 -9591105 - DMLTR5 LTR Gypsy 0 266 1 1 682 288 148 0 0 chrX 12832270 12832331 -9590496 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 682 216 48 0 67 chrX 12833001 12833046 -9589781 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 682 22 56 0 0 chrX 12834086 12834122 -9588705 + AT_rich Low_complexity Low_complexity 1 36 0 1 682 239 232 0 0 chrX 12834517 12834573 -9588254 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 682 231 152 0 0 chrX 12835341 12835387 -9587440 + (TGG)n Simple_repeat Simple_repeat 2 47 0 1 682 216 253 24 12 chrX 12835972 12836056 -9586771 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 682 22 56 0 0 chrX 12837186 12837222 -9585605 + AT_rich Low_complexity Low_complexity 1 36 0 1 682 22 56 0 0 chrX 12838439 12838475 -9584352 + AT_rich Low_complexity Low_complexity 1 36 0 1 682 28 0 0 0 chrX 12838646 12838674 -9584153 + AT_rich Low_complexity Low_complexity 1 28 0 1 682 31 26 0 0 chrX 12838706 12838744 -9584083 + AT_rich Low_complexity Low_complexity 1 38 0 1 682 190 102 82 0 chrX 12839600 12839649 -9583178 + (ATATG)n Simple_repeat Simple_repeat 5 57 0 1 682 200 59 29 0 chrX 12839830 12839864 -9582963 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 682 195 42 0 0 chrX 12839995 12840019 -9582808 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 682 207 0 0 0 chrX 12840266 12840289 -9582538 + (TATTG)n Simple_repeat Simple_repeat 3 25 0 1 682 186 43 0 0 chrX 12840590 12840613 -9582214 + (TTATA)n Simple_repeat Simple_repeat 5 27 0 1 682 29 0 0 0 chrX 12840724 12840753 -9582074 + AT_rich Low_complexity Low_complexity 1 29 0 1 682 194 91 0 29 chrX 12842179 12842213 -9580614 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 1 682 211 229 0 0 chrX 12842583 12842631 -9580196 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 682 198 0 0 0 chrX 12843159 12843181 -9579646 + (A)n Simple_repeat Simple_repeat 1 22 0 1 682 30 27 0 0 chrX 12843262 12843299 -9579528 + AT_rich Low_complexity Low_complexity 1 37 0 1 682 186 118 0 0 chrX 12844050 12844084 -9578743 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 682 22 80 0 0 chrX 12844196 12844246 -9578581 + AT_rich Low_complexity Low_complexity 1 50 0 1 682 243 252 9 65 chrX 12844292 12844442 -9578385 + A-rich Low_complexity Low_complexity 1 141 0 1 683 22 56 0 0 chrX 12845210 12845246 -9577581 + AT_rich Low_complexity Low_complexity 1 36 0 1 683 192 125 0 0 chrX 12846666 12846698 -9576129 + (CGGAA)n Simple_repeat Simple_repeat 4 35 0 1 683 31 0 0 0 chrX 12848617 12848648 -9574179 + AT_rich Low_complexity Low_complexity 1 31 0 1 683 23 68 0 0 chrX 12848755 12848799 -9574028 + AT_rich Low_complexity Low_complexity 1 44 0 1 683 180 135 0 0 chrX 12849211 12849248 -9573579 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 683 219 36 0 0 chrX 12850686 12850714 -9572113 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 683 22 0 0 0 chrX 12851373 12851395 -9571432 + AT_rich Low_complexity Low_complexity 1 22 0 1 683 21 0 0 0 chrX 12851642 12851663 -9571164 + AT_rich Low_complexity Low_complexity 1 21 0 1 683 21 0 0 0 chrX 12851992 12852013 -9570814 + AT_rich Low_complexity Low_complexity 1 21 0 1 683 56 48 0 0 chrX 12852048 12852132 -9570695 + AT_rich Low_complexity Low_complexity 1 84 0 1 683 225 274 0 0 chrX 12854148 12854221 -9568606 - DMRPR Unknown Unknown -80 205 133 1 683 238 247 0 0 chrX 12854223 12854296 -9568531 - DMRPR Unknown Unknown -80 205 133 1 683 233 247 0 0 chrX 12854328 12854401 -9568426 - DMRPR Unknown Unknown -80 205 133 1 683 288 206 0 32 chrX 12854351 12854446 -9568381 + ROO_I LTR Pao 652 743 -7513 1 683 23 0 0 0 chrX 12854901 12854924 -9567903 + AT_rich Low_complexity Low_complexity 1 23 0 1 683 25 31 0 0 chrX 12855843 12855875 -9566952 + AT_rich Low_complexity Low_complexity 1 32 0 1 683 22 0 0 0 chrX 12856276 12856298 -9566529 + AT_rich Low_complexity Low_complexity 1 22 0 1 683 189 0 0 0 chrX 12857139 12857160 -9565667 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 683 22 35 0 0 chrX 12860114 12860143 -9562684 + AT_rich Low_complexity Low_complexity 1 29 0 1 683 395 283 0 16 chrX 12862723 12862906 -9559921 + (CAA)n Simple_repeat Simple_repeat 1 180 0 1 683 320 209 11 11 chrX 12862992 12863166 -9559661 + (CAA)n Simple_repeat Simple_repeat 3 176 0 1 683 241 320 0 17 chrX 12863228 12863403 -9559424 + (CAA)n Simple_repeat Simple_repeat 2 173 0 1 683 182 116 0 23 chrX 12865552 12865596 -9557231 + (TTATA)n Simple_repeat Simple_repeat 4 46 0 1 683 276 253 0 0 chrX 12865957 12866040 -9556787 + (CTA)n Simple_repeat Simple_repeat 3 85 0 1 683 28 29 0 0 chrX 12868777 12868812 -9554015 + AT_rich Low_complexity Low_complexity 1 35 0 1 683 208 226 0 0 chrX 12869016 12869069 -9553758 + (TGG)n Simple_repeat Simple_repeat 3 55 0 1 683 25 65 0 0 chrX 12869812 12869858 -9552969 + AT_rich Low_complexity Low_complexity 1 46 0 1 683 29 70 0 0 chrX 12872477 12872534 -9550293 + AT_rich Low_complexity Low_complexity 1 57 0 1 683 233 75 0 24 chrX 12872747 12872788 -9550039 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 683 21 36 0 0 chrX 12873212 12873240 -9549587 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 21 36 0 0 chrX 12874666 12874694 -9548133 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 24 0 0 0 chrX 12875387 12875411 -9547416 + AT_rich Low_complexity Low_complexity 1 24 0 1 683 272 70 23 0 chrX 12875574 12875617 -9547210 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 683 21 0 0 0 chrX 12875988 12876009 -9546818 + AT_rich Low_complexity Low_complexity 1 21 0 1 683 195 42 0 0 chrX 12876032 12876056 -9546771 + (AATTG)n Simple_repeat Simple_repeat 5 28 0 1 683 24 53 0 0 chrX 12877938 12877976 -9544851 + AT_rich Low_complexity Low_complexity 1 38 0 1 683 294 73 0 0 chrX 12882257 12882298 -9540529 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 683 300 184 0 22 chrX 12882351 12882440 -9540387 - ROO_I LTR Pao -7518 738 652 1 683 183 100 0 0 chrX 12882440 12882470 -9540357 + (TCG)n Simple_repeat Simple_repeat 3 32 0 1 683 25 0 0 0 chrX 12883337 12883362 -9539465 + AT_rich Low_complexity Low_complexity 1 25 0 1 683 207 88 0 0 chrX 12884906 12884940 -9537887 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 683 228 175 0 0 chrX 12886056 12886119 -9536708 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 683 224 172 17 0 chrX 12886387 12886445 -9536382 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 683 198 0 0 0 chrX 12887433 12887455 -9535372 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 683 228 67 0 0 chrX 12889848 12889878 -9532949 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 683 288 221 31 21 chrX 12892200 12892297 -9530530 - XDMR_DM Unknown Unknown -224 136 39 1 683 1530 270 37 40 chrX 12892223 12892926 -9529901 + SAR_DM Satellite Satellite 218 918 -554 1 683 189 0 0 0 chrX 12894349 12894370 -9528457 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 683 189 178 0 0 chrX 12894748 12894793 -9528034 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 683 26 0 0 0 chrX 12894929 12894955 -9527872 + AT_rich Low_complexity Low_complexity 1 26 0 1 683 208 147 0 0 chrX 12895867 12895901 -9526926 + (T)n Simple_repeat Simple_repeat 1 34 0 1 683 24 67 0 0 chrX 12896161 12896206 -9526621 + AT_rich Low_complexity Low_complexity 1 45 0 1 683 282 56 0 0 chrX 12896317 12896353 -9526474 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 683 33 0 0 0 chrX 12898819 12898852 -9523975 + AT_rich Low_complexity Low_complexity 1 33 0 1 683 189 74 0 0 chrX 12904568 12904595 -9518232 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 1 683 213 159 0 0 chrX 12905112 12905156 -9517671 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 683 234 128 0 0 chrX 12906122 12906161 -9516666 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 683 258 81 0 0 chrX 12906988 12907025 -9515802 + (AATTG)n Simple_repeat Simple_repeat 3 39 0 1 683 24 53 0 0 chrX 12907415 12907453 -9515374 + AT_rich Low_complexity Low_complexity 1 38 0 1 683 209 272 43 21 chrX 12907729 12907823 -9515004 + (CAGAGA)n Simple_repeat Simple_repeat 3 98 0 1 683 23 0 0 0 chrX 12908514 12908537 -9514290 + AT_rich Low_complexity Low_complexity 1 23 0 1 683 21 36 0 0 chrX 12910298 12910326 -9512501 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 203 286 0 0 chrX 12910819 12910875 -9511952 + (CCCCAA)n Simple_repeat Simple_repeat 1 56 0 1 683 21 0 0 0 chrX 12911478 12911499 -9511328 + AT_rich Low_complexity Low_complexity 1 21 0 1 683 28 0 0 0 chrX 12912677 12912705 -9510122 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 2014 289 33 45 chrX 12913093 12914287 -9508540 + SAR_DM Satellite Satellite 1 1179 -217 1 683 707 235 29 37 chrX 12914080 12914323 -9508504 - XDMR_DM Unknown Unknown -13 347 107 1 683 27 29 0 0 chrX 12917252 12917286 -9505541 + AT_rich Low_complexity Low_complexity 1 34 0 1 683 266 226 0 0 chrX 12917625 12917687 -9505140 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 683 22 0 0 0 chrX 12917747 12917769 -9505058 + AT_rich Low_complexity Low_complexity 1 22 0 1 683 242 212 0 43 chrX 12918214 12918283 -9504544 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 683 189 0 0 0 chrX 12918913 12918934 -9503893 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 683 194 62 31 0 chrX 12919336 12919368 -9503459 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 1 683 239 294 0 38 chrX 12921324 12921430 -9501397 + A-rich Low_complexity Low_complexity 1 102 0 1 683 200 139 0 27 chrX 12921852 12921889 -9500938 + T-rich Low_complexity Low_complexity 1 36 0 1 683 198 91 0 0 chrX 12922544 12922577 -9500250 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 683 25 51 0 0 chrX 12923279 12923318 -9499509 + AT_rich Low_complexity Low_complexity 1 39 0 1 683 55 62 0 0 chrX 12924529 12924626 -9498201 + AT_rich Low_complexity Low_complexity 1 97 0 1 683 201 158 0 0 chrX 12925283 12925321 -9497506 + A-rich Low_complexity Low_complexity 1 38 0 1 683 21 71 0 0 chrX 12926038 12926080 -9496747 + AT_rich Low_complexity Low_complexity 1 42 0 1 683 237 146 0 0 chrX 12926589 12926637 -9496190 + (CAG)n Simple_repeat Simple_repeat 1 48 0 1 683 22 35 0 0 chrX 12927034 12927063 -9495764 + AT_rich Low_complexity Low_complexity 1 29 0 1 683 27 0 0 0 chrX 12928733 12928760 -9494067 + AT_rich Low_complexity Low_complexity 1 27 0 1 683 213 39 0 0 chrX 12928873 12928899 -9493928 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 683 223 229 0 0 chrX 12929107 12929155 -9493672 + (CGG)n Simple_repeat Simple_repeat 1 48 0 1 683 189 154 0 0 chrX 12929201 12929240 -9493587 + (CAG)n Simple_repeat Simple_repeat 2 40 0 1 683 195 167 0 0 chrX 12929728 12929770 -9493057 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 683 21 0 0 0 chrX 12929903 12929924 -9492903 + GC_rich Low_complexity Low_complexity 1 21 0 1 683 223 204 61 0 chrX 12931313 12931362 -9491465 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 1 683 28 0 0 0 chrX 12931624 12931652 -9491175 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 192 200 0 0 chrX 12931832 12931882 -9490945 + A-rich Low_complexity Low_complexity 1 50 0 1 683 231 36 0 0 chrX 12931931 12931959 -9490868 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 683 216 0 0 0 chrX 12932127 12932151 -9490676 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 683 225 175 0 0 chrX 12933170 12933210 -9489617 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 683 225 0 0 0 chrX 12933417 12933442 -9489385 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 683 180 0 0 0 chrX 12934587 12934607 -9488220 + (CTTTA)n Simple_repeat Simple_repeat 5 24 0 1 683 225 241 0 18 chrX 12935780 12935835 -9486992 + (CCCCAA)n Simple_repeat Simple_repeat 1 54 0 1 683 22 35 0 0 chrX 12936401 12936430 -9486397 + AT_rich Low_complexity Low_complexity 1 29 0 1 683 22 35 0 0 chrX 12937743 12937772 -9485055 + AT_rich Low_complexity Low_complexity 1 29 0 1 683 369 75 0 0 chrX 12938314 12938367 -9484460 + (CAAGT)n Simple_repeat Simple_repeat 1 53 0 1 683 211 289 0 0 chrX 12939843 12939895 -9482932 + (ATG)n Simple_repeat Simple_repeat 2 53 0 1 683 216 200 0 0 chrX 12942094 12942139 -9480688 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 683 219 133 0 0 chrX 12942675 12942720 -9480107 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 683 259 300 0 0 chrX 12942858 12942948 -9479879 + (CA)n Simple_repeat Simple_repeat 1 90 0 1 683 229 211 0 0 chrX 12942990 12943042 -9479785 + T-rich Low_complexity Low_complexity 1 52 0 1 683 180 0 0 0 chrX 12945411 12945431 -9477396 + (A)n Simple_repeat Simple_repeat 1 20 0 1 683 21 0 0 0 chrX 12945502 12945523 -9477304 + AT_rich Low_complexity Low_complexity 1 21 0 1 683 24 0 0 0 chrX 12948814 12948838 -9473989 + AT_rich Low_complexity Low_complexity 1 24 0 1 683 22 35 0 0 chrX 12949551 12949580 -9473247 + AT_rich Low_complexity Low_complexity 1 29 0 1 683 212 167 0 20 chrX 12950149 12950198 -9472629 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 683 219 170 21 0 chrX 12950354 12950401 -9472426 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 683 3403 183 8 13 chrX 12950612 12951322 -9471505 + SAR_DM Satellite Satellite 217 923 -549 1 683 22 0 0 0 chrX 12953381 12953403 -9469424 + AT_rich Low_complexity Low_complexity 1 22 0 1 683 220 146 42 0 chrX 12953770 12953818 -9469009 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 683 195 114 0 0 chrX 12955980 12956015 -9466812 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 683 23 33 0 0 chrX 12956407 12956437 -9466390 + AT_rich Low_complexity Low_complexity 1 30 0 1 683 22 56 0 0 chrX 12958035 12958071 -9464756 + AT_rich Low_complexity Low_complexity 1 36 0 1 683 371 125 14 0 chrX 12958800 12958872 -9463955 + (TGGA)n Simple_repeat Simple_repeat 2 74 0 1 683 21 36 0 0 chrX 12959014 12959042 -9463785 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 216 0 0 0 chrX 12960703 12960727 -9462100 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 1 683 223 222 31 16 chrX 12960727 12960791 -9462036 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 683 279 150 0 0 chrX 12961428 12961488 -9461339 + (TGGA)n Simple_repeat Simple_repeat 1 60 0 1 683 31 44 0 0 chrX 12962818 12962863 -9459964 + AT_rich Low_complexity Low_complexity 1 45 0 1 683 215 211 0 0 chrX 12963919 12963971 -9458856 + (CAG)n Simple_repeat Simple_repeat 2 53 0 1 683 231 202 0 63 chrX 12964105 12964216 -9458611 + (CAA)n Simple_repeat Simple_repeat 3 106 0 1 683 237 108 0 0 chrX 12965144 12965181 -9457646 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 683 400 126 0 22 chrX 12965413 12965502 -9457325 + (TTG)n Simple_repeat Simple_repeat 3 89 0 1 683 183 100 0 0 chrX 12965582 12965612 -9457215 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 683 180 111 0 0 chrX 12965782 12965809 -9457018 + (CATA)n Simple_repeat Simple_repeat 4 30 0 1 683 21 36 0 0 chrX 12965849 12965877 -9456950 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 26 0 0 0 chrX 12966787 12966813 -9456014 + AT_rich Low_complexity Low_complexity 1 26 0 1 683 227 149 43 0 chrX 12967164 12967211 -9455616 + CT-rich Low_complexity Low_complexity 2 50 0 1 683 189 121 0 0 chrX 12967438 12967471 -9455356 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 683 27 0 0 0 chrX 12967780 12967807 -9455020 + AT_rich Low_complexity Low_complexity 1 27 0 1 683 22 0 0 0 chrX 12968182 12968204 -9454623 + AT_rich Low_complexity Low_complexity 1 22 0 1 683 23 0 0 0 chrX 12968774 12968797 -9454030 + AT_rich Low_complexity Low_complexity 1 23 0 1 683 186 103 0 0 chrX 12969441 12969470 -9453357 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 683 220 257 0 28 chrX 12969752 12969824 -9453003 + (CGG)n Simple_repeat Simple_repeat 2 71 0 1 683 257 198 10 0 chrX 12970466 12970562 -9452265 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 683 296 253 17 61 chrX 12970900 12971081 -9451746 + A-rich Low_complexity Low_complexity 6 178 0 1 683 21 0 0 0 chrX 12972157 12972178 -9450649 + AT_rich Low_complexity Low_complexity 1 21 0 1 683 180 77 0 0 chrX 12972382 12972408 -9450419 + (T)n Simple_repeat Simple_repeat 1 26 0 1 683 180 125 0 0 chrX 12973233 12973265 -9449562 + (T)n Simple_repeat Simple_repeat 1 32 0 1 684 225 154 0 0 chrX 12976422 12976461 -9446366 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 684 232 201 21 63 chrX 12978433 12978576 -9444251 + T-rich Low_complexity Low_complexity 4 140 0 1 684 22 0 0 0 chrX 12978876 12978898 -9443929 + AT_rich Low_complexity Low_complexity 1 22 0 1 684 230 238 0 0 chrX 12982709 12982751 -9440076 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 684 34 0 0 0 chrX 12984729 12984763 -9438064 + AT_rich Low_complexity Low_complexity 1 34 0 1 684 23 78 0 0 chrX 12984931 12984982 -9437845 + AT_rich Low_complexity Low_complexity 1 51 0 1 684 21 0 0 0 chrX 12986958 12986979 -9435848 + AT_rich Low_complexity Low_complexity 1 21 0 1 684 22 0 0 0 chrX 12987829 12987851 -9434976 + AT_rich Low_complexity Low_complexity 1 22 0 1 684 24 0 0 0 chrX 12989902 12989926 -9432901 + AT_rich Low_complexity Low_complexity 1 24 0 1 684 186 43 0 0 chrX 12990469 12990492 -9432335 + (CTAA)n Simple_repeat Simple_repeat 2 24 0 1 684 231 36 0 0 chrX 12990691 12990719 -9432108 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 684 25 0 0 0 chrX 12993711 12993736 -9429091 + AT_rich Low_complexity Low_complexity 1 25 0 1 684 188 111 28 0 chrX 12994146 12994182 -9428645 + (TATAA)n Simple_repeat Simple_repeat 4 40 0 1 684 1533 27 13 9 chrX 12994651 12994875 -9427952 + (TAGA)n Simple_repeat Simple_repeat 1 224 0 1 684 23 33 0 0 chrX 12995585 12995615 -9427212 + AT_rich Low_complexity Low_complexity 1 30 0 1 684 189 121 0 0 chrX 12996687 12996720 -9426107 + (T)n Simple_repeat Simple_repeat 1 33 0 1 684 22 0 0 0 chrX 12998571 12998593 -9424234 + AT_rich Low_complexity Low_complexity 1 22 0 1 684 198 118 0 0 chrX 13002149 13002183 -9420644 + (T)n Simple_repeat Simple_repeat 1 34 0 1 684 229 291 0 34 chrX 13002502 13002591 -9420236 + (TA)n Simple_repeat Simple_repeat 2 87 0 1 684 23 33 0 0 chrX 13003878 13003908 -9418919 + AT_rich Low_complexity Low_complexity 1 30 0 1 684 24 0 0 0 chrX 13004175 13004199 -9418628 + AT_rich Low_complexity Low_complexity 1 24 0 1 684 267 31 0 0 chrX 13004913 13004945 -9417882 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 684 22 0 0 0 chrX 13005346 13005368 -9417459 + AT_rich Low_complexity Low_complexity 1 22 0 1 684 22 35 0 0 chrX 13005503 13005532 -9417295 + AT_rich Low_complexity Low_complexity 1 29 0 1 684 24 0 0 0 chrX 13006401 13006425 -9416402 + AT_rich Low_complexity Low_complexity 1 24 0 1 684 1330 105 50 5 chrX 13007037 13007257 -9415570 - XDMR Unknown Unknown -131 230 1 1 684 2068 269 30 39 chrX 13007081 13007257 -9415570 + SAR_DM Satellite Satellite 181 799 -673 1 684 2518 89 6 3 chrX 13007257 13007617 -9415210 - XDMR Unknown Unknown 0 361 1 1 684 2521 89 6 3 chrX 13007617 13007977 -9414850 - XDMR Unknown Unknown 0 361 1 1 684 2068 269 30 39 chrX 13007977 13008080 -9414747 + SAR_DM Satellite Satellite 800 1170 -302 1 684 270 176 185 11 chrX 13008428 13008520 -9414307 + ROO_I LTR Pao 615 722 -7534 1 684 190 89 0 62 chrX 13011395 13011443 -9411384 + A-rich Low_complexity Low_complexity 2 46 0 1 684 21 0 0 0 chrX 13011699 13011720 -9411107 + AT_rich Low_complexity Low_complexity 1 21 0 1 684 210 118 0 0 chrX 13017079 13017113 -9405714 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 684 3471 189 15 30 chrX 13020568 13021407 -9401420 - SAR_DM Satellite Satellite -242 939 28 1 684 420 206 0 0 chrX 13021407 13021499 -9401328 + XDMR_DM Unknown Unknown 6 97 -263 1 684 3471 189 15 30 chrX 13021499 13021522 -9401305 - SAR_DM Satellite Satellite -242 27 1 1 684 213 159 0 0 chrX 13022584 13022628 -9400199 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 684 246 160 0 0 chrX 13023022 13023072 -9399755 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 684 206 250 25 12 chrX 13025108 13025189 -9397638 + CT-rich Low_complexity Low_complexity 2 83 0 1 684 210 119 0 45 chrX 13026404 13026448 -9396379 + (TATAA)n Simple_repeat Simple_repeat 1 42 0 1 684 233 75 0 24 chrX 13028767 13028808 -9394019 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 684 208 292 0 50 chrX 13030277 13030378 -9392449 + (CAA)n Simple_repeat Simple_repeat 2 97 0 1 684 26 0 0 0 chrX 13030707 13030733 -9392094 + AT_rich Low_complexity Low_complexity 1 26 0 1 684 31 26 0 0 chrX 13031203 13031241 -9391586 + AT_rich Low_complexity Low_complexity 1 38 0 1 684 219 88 0 0 chrX 13031416 13031450 -9391377 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 684 219 246 0 0 chrX 13033362 13033423 -9389404 + A-rich Low_complexity Low_complexity 1 61 0 1 684 201 24 47 47 chrX 13034102 13034145 -9388682 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 1 684 250 98 0 38 chrX 13034784 13034837 -9387990 + (CAG)n Simple_repeat Simple_repeat 3 53 0 1 684 230 182 0 18 chrX 13034936 13034992 -9387835 + T-rich Low_complexity Low_complexity 6 60 0 1 684 195 100 0 0 chrX 13036062 13036092 -9386735 + (T)n Simple_repeat Simple_repeat 1 30 0 1 684 25 65 0 0 chrX 13037301 13037347 -9385480 + AT_rich Low_complexity Low_complexity 1 46 0 1 684 201 154 0 0 chrX 13037548 13037587 -9385240 + CT-rich Low_complexity Low_complexity 2 40 0 1 684 36 40 0 0 chrX 13039299 13039349 -9383478 + AT_rich Low_complexity Low_complexity 1 50 0 1 684 180 135 0 0 chrX 13039643 13039680 -9383147 + (A)n Simple_repeat Simple_repeat 1 37 0 1 684 27 29 0 0 chrX 13040028 13040062 -9382765 + AT_rich Low_complexity Low_complexity 1 34 0 1 684 216 0 0 0 chrX 13041245 13041269 -9381558 + (T)n Simple_repeat Simple_repeat 1 24 0 1 684 33 0 0 0 chrX 13041561 13041594 -9381233 + AT_rich Low_complexity Low_complexity 1 33 0 1 684 195 114 0 0 chrX 13043286 13043321 -9379506 + (A)n Simple_repeat Simple_repeat 1 35 0 1 684 25 0 0 0 chrX 13043646 13043671 -9379156 + AT_rich Low_complexity Low_complexity 1 25 0 1 684 27 0 0 0 chrX 13043794 13043821 -9379006 + AT_rich Low_complexity Low_complexity 1 27 0 1 684 206 268 0 0 chrX 13043844 13043900 -9378927 + CT-rich Low_complexity Low_complexity 3 58 0 1 684 29 28 0 0 chrX 13044238 13044274 -9378553 + AT_rich Low_complexity Low_complexity 1 36 0 1 684 21 0 0 0 chrX 13063780 13063801 -9359026 + AT_rich Low_complexity Low_complexity 1 21 0 1 684 22 56 0 0 chrX 13064382 13064418 -9358409 + AT_rich Low_complexity Low_complexity 1 36 0 1 684 23 0 0 0 chrX 13065517 13065540 -9357287 + AT_rich Low_complexity Low_complexity 1 23 0 1 684 207 114 0 0 chrX 13066060 13066095 -9356732 + (GTCTG)n Simple_repeat Simple_repeat 2 36 0 1 684 202 200 0 0 chrX 13069300 13069340 -9353487 + (CAATC)n Simple_repeat Simple_repeat 1 40 0 1 684 204 67 0 0 chrX 13069541 13069571 -9353256 + (T)n Simple_repeat Simple_repeat 1 30 0 1 684 189 139 0 0 chrX 13070809 13070852 -9351975 + (A)n Simple_repeat Simple_repeat 1 43 0 1 684 303 28 0 0 chrX 13070927 13070963 -9351864 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 684 208 143 0 28 chrX 13072590 13072626 -9350201 + (TATG)n Simple_repeat Simple_repeat 4 38 0 1 684 21 0 0 0 chrX 13073159 13073180 -9349647 + AT_rich Low_complexity Low_complexity 1 21 0 1 684 213 159 0 0 chrX 13073975 13074019 -9348808 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1 684 368 71 18 0 chrX 13075004 13075060 -9347767 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 684 213 65 0 0 chrX 13076019 13076050 -9346777 + (T)n Simple_repeat Simple_repeat 1 31 0 1 684 189 139 0 0 chrX 13077291 13077334 -9345493 + (A)n Simple_repeat Simple_repeat 1 43 0 1 684 321 26 0 0 chrX 13077409 13077447 -9345380 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 684 208 143 0 28 chrX 13079063 13079099 -9343728 + (TATG)n Simple_repeat Simple_repeat 4 38 0 1 684 22 0 0 0 chrX 13079632 13079654 -9343173 + AT_rich Low_complexity Low_complexity 1 22 0 1 684 213 159 0 0 chrX 13080449 13080493 -9342334 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1 684 368 71 18 0 chrX 13081478 13081534 -9341293 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 684 207 191 0 0 chrX 13083047 13083094 -9339733 + A-rich Low_complexity Low_complexity 1 47 0 1 684 34 0 0 0 chrX 13083611 13083645 -9339182 + AT_rich Low_complexity Low_complexity 1 34 0 1 684 366 61 0 0 chrX 13083823 13083872 -9338955 + (CTG)n Simple_repeat Simple_repeat 3 51 0 1 684 2340 84 43 3 chrX 13088576 13088922 -9333905 - XDMR Unknown Unknown 0 361 2 1 684 1065 258 45 33 chrX 13088912 13089070 -9333757 + SAR_DM Satellite Satellite 198 714 -756 1 684 2314 94 25 3 chrX 13089070 13089423 -9333404 - XDMR Unknown Unknown 0 361 1 1 684 414 69 0 0 chrX 13089793 13089851 -9332976 + (TAA)n Simple_repeat Simple_repeat 3 60 0 1 684 22 56 0 0 chrX 13090132 13090168 -9332659 + AT_rich Low_complexity Low_complexity 1 36 0 1 684 23 0 0 0 chrX 13091797 13091820 -9331007 + AT_rich Low_complexity Low_complexity 1 23 0 1 684 228 284 0 0 chrX 13092460 13092527 -9330300 + CT-rich Low_complexity Low_complexity 2 68 0 1 684 27 0 0 0 chrX 13096232 13096259 -9326568 + AT_rich Low_complexity Low_complexity 1 27 0 1 684 213 121 0 0 chrX 13096665 13096698 -9326129 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 684 35 0 0 0 chrX 13097216 13097251 -9325576 + AT_rich Low_complexity Low_complexity 1 35 0 1 684 258 32 0 0 chrX 13097294 13097325 -9325502 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 684 21 0 0 0 chrX 13097713 13097734 -9325093 + AT_rich Low_complexity Low_complexity 1 21 0 1 684 383 211 0 17 chrX 13097879 13097995 -9324832 + (TTG)n Simple_repeat Simple_repeat 2 115 0 1 684 208 143 0 0 chrX 13101496 13101531 -9321296 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 684 180 0 0 0 chrX 13102243 13102263 -9320564 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 684 24 0 0 0 chrX 13102304 13102328 -9320499 + AT_rich Low_complexity Low_complexity 1 24 0 1 684 189 0 0 0 chrX 13103547 13103568 -9319259 + (A)n Simple_repeat Simple_repeat 1 21 0 1 684 26 30 0 0 chrX 13104398 13104431 -9318396 + AT_rich Low_complexity Low_complexity 1 33 0 1 684 23 33 0 0 chrX 13105285 13105315 -9317512 + AT_rich Low_complexity Low_complexity 1 30 0 1 684 195 146 0 0 chrX 13105424 13105465 -9317362 + (TTG)n Simple_repeat Simple_repeat 1 41 0 1 684 35 88 0 0 chrX 13105843 13105934 -9316893 + AT_rich Low_complexity Low_complexity 1 91 0 1 685 23 0 0 0 chrX 13108731 13108754 -9314073 + AT_rich Low_complexity Low_complexity 1 23 0 1 685 249 139 0 0 chrX 13109483 13109526 -9313301 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1 685 185 65 0 31 chrX 13114203 13114235 -9308592 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 685 207 203 0 0 chrX 13114276 13114335 -9308492 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 685 186 194 14 29 chrX 13114339 13114408 -9308419 + (TAA)n Simple_repeat Simple_repeat 2 69 0 1 685 208 135 0 0 chrX 13115151 13115188 -9307639 + (T)n Simple_repeat Simple_repeat 1 37 0 1 685 205 200 0 0 chrX 13118074 13118114 -9304713 + A-rich Low_complexity Low_complexity 1 40 0 1 685 202 229 0 0 chrX 13120236 13120284 -9302543 + A-rich Low_complexity Low_complexity 1 48 0 1 685 237 158 35 0 chrX 13120372 13120429 -9302398 + DOC3_DM LINE Jockey 516 574 -4166 1 685 29 28 0 0 chrX 13120556 13120592 -9302235 + AT_rich Low_complexity Low_complexity 1 36 0 1 685 23 33 0 0 chrX 13121250 13121280 -9301547 + AT_rich Low_complexity Low_complexity 1 30 0 1 685 21 0 0 0 chrX 13122172 13122193 -9300634 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 21 0 0 0 chrX 13124634 13124655 -9298172 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 195 42 0 0 chrX 13126448 13126472 -9296355 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 685 253 196 9 97 chrX 13129181 13129294 -9293533 + T-rich Low_complexity Low_complexity 2 104 0 1 685 186 71 0 0 chrX 13129549 13129577 -9293250 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 1 685 225 119 0 0 chrX 13131819 13131861 -9290966 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 685 21 0 0 0 chrX 13132070 13132091 -9290736 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 201 147 0 0 chrX 13133023 13133057 -9289770 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 685 30 0 0 0 chrX 13133414 13133444 -9289383 + AT_rich Low_complexity Low_complexity 1 30 0 1 685 21 0 0 0 chrX 13134020 13134041 -9288786 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 922 210 28 36 chrX 13135809 13136061 -9286766 - XDMR Unknown Unknown -111 250 1 1 685 1885 250 22 22 chrX 13135931 13136061 -9286766 + SAR_DM Satellite Satellite 226 516 -956 1 685 2479 95 6 3 chrX 13136061 13136421 -9286406 - XDMR Unknown Unknown 0 361 1 1 685 1265 76 0 42 chrX 13136421 13136613 -9286214 - XDMR Unknown Unknown 0 361 178 1 685 1885 250 22 22 chrX 13136421 13136576 -9286251 + SAR_DM Satellite Satellite 517 870 -602 1 685 189 0 0 0 chrX 13137991 13138012 -9284815 + (T)n Simple_repeat Simple_repeat 1 21 0 1 685 28 86 0 0 chrX 13140047 13140117 -9282710 + AT_rich Low_complexity Low_complexity 1 70 0 1 685 24 0 0 0 chrX 13140871 13140895 -9281932 + AT_rich Low_complexity Low_complexity 1 24 0 1 685 21 0 0 0 chrX 13142120 13142141 -9280686 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 183 114 0 0 chrX 13142213 13142248 -9280579 + (A)n Simple_repeat Simple_repeat 1 35 0 1 685 50 104 0 0 chrX 13142930 13143113 -9279714 + AT_rich Low_complexity Low_complexity 1 183 0 1 685 23 86 0 0 chrX 13143131 13143189 -9279638 + AT_rich Low_complexity Low_complexity 1 58 0 1 685 23 54 0 0 chrX 13143304 13143341 -9279486 + AT_rich Low_complexity Low_complexity 1 37 0 1 685 210 259 0 0 chrX 13145115 13145173 -9277654 + A-rich Low_complexity Low_complexity 1 58 0 1 685 195 186 0 0 chrX 13145709 13145752 -9277075 + CT-rich Low_complexity Low_complexity 2 44 0 1 685 224 122 24 0 chrX 13146100 13146141 -9276686 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 685 26 0 0 0 chrX 13147607 13147633 -9275194 + AT_rich Low_complexity Low_complexity 1 26 0 1 685 27 29 0 0 chrX 13147934 13147968 -9274859 + AT_rich Low_complexity Low_complexity 1 34 0 1 685 29 0 0 0 chrX 13149053 13149082 -9273745 + AT_rich Low_complexity Low_complexity 1 29 0 1 685 210 37 0 0 chrX 13149594 13149621 -9273206 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 1 685 208 131 21 21 chrX 13150224 13150271 -9272556 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1 685 38 22 0 0 chrX 13150866 13150911 -9271916 + AT_rich Low_complexity Low_complexity 1 45 0 1 685 210 71 0 0 chrX 13150990 13151018 -9271809 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 685 27 0 0 0 chrX 13152464 13152491 -9270336 + AT_rich Low_complexity Low_complexity 1 27 0 1 685 36 0 0 0 chrX 13152882 13152918 -9269909 + AT_rich Low_complexity Low_complexity 1 36 0 1 685 23 0 0 0 chrX 13153099 13153122 -9269705 + AT_rich Low_complexity Low_complexity 1 23 0 1 685 21 0 0 0 chrX 13153494 13153515 -9269312 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 245 197 119 15 chrX 13155995 13156062 -9266765 + MAX_I LTR Pao 456 529 -7385 1 685 21 36 0 0 chrX 13156437 13156465 -9266362 + AT_rich Low_complexity Low_complexity 1 28 0 1 685 21 36 0 0 chrX 13157047 13157075 -9265752 + AT_rich Low_complexity Low_complexity 1 28 0 1 685 180 77 0 0 chrX 13157677 13157703 -9265124 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 685 249 33 0 0 chrX 13158040 13158070 -9264757 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 685 208 147 0 0 chrX 13158561 13158595 -9264232 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 685 184 54 0 75 chrX 13158849 13158889 -9263938 + (CAA)n Simple_repeat Simple_repeat 3 39 0 1 685 202 236 0 35 chrX 13161621 13161678 -9261149 + (CGG)n Simple_repeat Simple_repeat 1 55 0 1 685 21 95 0 0 chrX 13162575 13162638 -9260189 + AT_rich Low_complexity Low_complexity 1 63 0 1 685 453 110 0 0 chrX 13164501 13164574 -9258253 + (CTG)n Simple_repeat Simple_repeat 3 75 0 1 685 600 27 0 0 chrX 13165346 13165420 -9257407 + (TTA)n Simple_repeat Simple_repeat 2 75 0 1 685 243 157 0 0 chrX 13166235 13166286 -9256541 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 685 182 62 0 30 chrX 13166628 13166661 -9256166 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1 685 34 0 0 0 chrX 13167120 13167154 -9255673 + AT_rich Low_complexity Low_complexity 1 34 0 1 685 24 53 0 0 chrX 13168568 13168606 -9254221 + AT_rich Low_complexity Low_complexity 1 38 0 1 685 204 222 32 43 chrX 13168902 13168996 -9253831 + A-rich Low_complexity Low_complexity 4 96 0 1 685 215 133 22 0 chrX 13169741 13169786 -9253041 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 685 205 280 13 0 chrX 13170641 13170716 -9252111 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 685 26 0 0 0 chrX 13170897 13170923 -9251904 + AT_rich Low_complexity Low_complexity 1 26 0 1 685 192 40 0 0 chrX 13171383 13171408 -9251419 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 685 21 0 0 0 chrX 13171568 13171589 -9251238 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 279 0 0 0 chrX 13174378 13174409 -9248418 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 685 180 111 0 0 chrX 13176667 13176694 -9246133 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 685 192 125 0 0 chrX 13177097 13177129 -9245698 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 685 209 209 0 0 chrX 13178369 13178412 -9244415 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1 685 240 191 14 29 chrX 13178446 13178516 -9244311 + GA-rich Low_complexity Low_complexity 2 70 0 1 685 203 129 31 46 chrX 13178558 13178623 -9244204 + T-rich Low_complexity Low_complexity 2 65 0 1 685 267 31 0 0 chrX 13179090 13179122 -9243705 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 685 216 160 40 0 chrX 13187941 13187991 -9234836 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 685 273 119 0 0 chrX 13188102 13188144 -9234683 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 685 30 0 0 0 chrX 13190944 13190974 -9231853 + AT_rich Low_complexity Low_complexity 1 30 0 1 685 22 35 0 0 chrX 13190999 13191028 -9231799 + AT_rich Low_complexity Low_complexity 1 29 0 1 685 231 36 0 0 chrX 13194952 13194980 -9227847 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1 685 327 136 0 0 chrX 13195114 13195173 -9227654 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 685 23 0 0 0 chrX 13196321 13196344 -9226483 + AT_rich Low_complexity Low_complexity 1 23 0 1 685 38 0 0 0 chrX 13196586 13196624 -9226203 + AT_rich Low_complexity Low_complexity 1 38 0 1 685 210 238 0 0 chrX 13196664 13196727 -9226100 + A-rich Low_complexity Low_complexity 1 63 0 1 685 279 79 0 0 chrX 13197024 13197062 -9225765 + (CAT)n Simple_repeat Simple_repeat 2 39 0 1 685 180 77 0 0 chrX 13197206 13197232 -9225595 + (T)n Simple_repeat Simple_repeat 1 26 0 1 685 244 241 0 0 chrX 13198050 13198108 -9224719 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 685 263 359 0 0 chrX 13199410 13199513 -9223314 + (CGA)n Simple_repeat Simple_repeat 2 104 0 1 685 198 0 0 0 chrX 13199921 13199943 -9222884 + (CAG)n Simple_repeat Simple_repeat 1 22 0 1 685 189 94 0 0 chrX 13200788 13200820 -9222007 + (GGA)n Simple_repeat Simple_repeat 2 33 0 1 685 21 0 0 0 chrX 13201267 13201288 -9221539 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 252 0 0 0 chrX 13201708 13201736 -9221091 + (T)n Simple_repeat Simple_repeat 1 28 0 1 685 208 236 13 40 chrX 13202151 13202226 -9220601 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 1 685 222 136 0 0 chrX 13202522 13202566 -9220261 + (T)n Simple_repeat Simple_repeat 1 44 0 1 685 219 36 0 0 chrX 13203056 13203084 -9219743 + (T)n Simple_repeat Simple_repeat 1 28 0 1 685 32 0 0 0 chrX 13204154 13204186 -9218641 + AT_rich Low_complexity Low_complexity 1 32 0 1 685 23 0 0 0 chrX 13207039 13207062 -9215765 + AT_rich Low_complexity Low_complexity 1 23 0 1 685 24 53 0 0 chrX 13207192 13207230 -9215597 + AT_rich Low_complexity Low_complexity 1 38 0 1 685 25 0 0 0 chrX 13207522 13207547 -9215280 + AT_rich Low_complexity Low_complexity 1 25 0 1 685 21 36 0 0 chrX 13207635 13207663 -9215164 + AT_rich Low_complexity Low_complexity 1 28 0 1 685 330 80 0 0 chrX 13208166 13208216 -9214611 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 685 213 102 0 93 chrX 13209194 13209248 -9213579 + (CATAC)n Simple_repeat Simple_repeat 2 50 0 1 685 213 65 0 0 chrX 13209357 13209388 -9213439 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 685 201 121 0 0 chrX 13209452 13209485 -9213342 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 685 210 191 0 0 chrX 13209843 13209885 -9212942 + T-rich Low_complexity Low_complexity 1 42 0 1 685 258 32 0 0 chrX 13209994 13210025 -9212802 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 685 195 69 0 0 chrX 13210780 13210809 -9212018 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 685 26 64 0 0 chrX 13212366 13212413 -9210414 + AT_rich Low_complexity Low_complexity 1 47 0 1 685 205 265 0 14 chrX 13212566 13212635 -9210192 + GA-rich Low_complexity Low_complexity 1 68 0 1 685 25 75 0 0 chrX 13213564 13213617 -9209210 + AT_rich Low_complexity Low_complexity 1 53 0 1 685 279 150 0 0 chrX 13213749 13213809 -9209018 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 685 21 57 0 0 chrX 13214889 13214924 -9207903 + AT_rich Low_complexity Low_complexity 1 35 0 1 685 293 145 16 0 chrX 13215200 13215262 -9207565 + (CTG)n Simple_repeat Simple_repeat 2 64 0 1 685 354 80 0 0 chrX 13215521 13215571 -9207256 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 685 203 171 0 0 chrX 13215652 13215693 -9207134 + A-rich Low_complexity Low_complexity 1 41 0 1 685 258 182 0 0 chrX 13216527 13216593 -9206234 + GA-rich Low_complexity Low_complexity 2 67 0 1 685 28 0 0 0 chrX 13217333 13217361 -9205466 + AT_rich Low_complexity Low_complexity 1 28 0 1 685 327 151 32 0 chrX 13218739 13218832 -9203995 + (TTG)n Simple_repeat Simple_repeat 1 96 0 1 685 273 300 0 0 chrX 13218910 13218990 -9203837 + (TA)n Simple_repeat Simple_repeat 2 81 0 1 685 283 333 0 0 chrX 13220212 13220308 -9202519 + (CGA)n Simple_repeat Simple_repeat 1 96 0 1 685 255 133 0 0 chrX 13222367 13222412 -9200415 + (T)n Simple_repeat Simple_repeat 1 45 0 1 685 238 218 0 18 chrX 13222980 13223036 -9199791 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1 685 24 0 0 0 chrX 13227778 13227802 -9195025 + AT_rich Low_complexity Low_complexity 1 24 0 1 685 1038 254 16 19 chrX 13227893 13228258 -9194569 + SAR_DM Satellite Satellite 546 909 -563 1 685 1056 161 14 14 chrX 13228063 13228283 -9194544 - XDMR Unknown Unknown 0 361 142 1 685 23 0 0 0 chrX 13231945 13231968 -9190859 + AT_rich Low_complexity Low_complexity 1 23 0 1 685 31 0 0 0 chrX 13232010 13232041 -9190786 + AT_rich Low_complexity Low_complexity 1 31 0 1 685 206 255 0 0 chrX 13234519 13234570 -9188257 + T-rich Low_complexity Low_complexity 1 51 0 1 685 246 62 0 0 chrX 13235232 13235264 -9187563 + (CACCAT)n Simple_repeat Simple_repeat 2 33 0 1 685 195 139 0 0 chrX 13235743 13235779 -9187048 + (TCG)n Simple_repeat Simple_repeat 2 37 0 1 685 303 28 0 0 chrX 13236164 13236200 -9186627 + (CGAAT)n Simple_repeat Simple_repeat 4 39 0 1 685 228 35 0 0 chrX 13237109 13237138 -9185689 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1 685 23 33 0 0 chrX 13237903 13237933 -9184894 + AT_rich Low_complexity Low_complexity 1 30 0 1 686 252 100 0 0 chrX 13238649 13238689 -9184138 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 686 183 170 0 0 chrX 13239051 13239098 -9183729 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 686 21 0 0 0 chrX 13239455 13239476 -9183351 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 39 22 0 0 chrX 13239593 13239639 -9183188 + AT_rich Low_complexity Low_complexity 1 46 0 1 686 290 270 0 9 chrX 13239694 13239806 -9183021 + (TG)n Simple_repeat Simple_repeat 2 112 0 1 686 216 97 0 0 chrX 13240255 13240286 -9182541 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1 686 258 125 0 0 chrX 13240372 13240420 -9182407 + (A)n Simple_repeat Simple_repeat 1 48 0 1 686 225 0 0 0 chrX 13240716 13240741 -9182086 + (A)n Simple_repeat Simple_repeat 1 25 0 1 686 180 97 0 0 chrX 13241646 13241677 -9181150 + (TGAG)n Simple_repeat Simple_repeat 4 34 0 1 686 256 271 10 10 chrX 13241697 13241794 -9181033 + (TG)n Simple_repeat Simple_repeat 1 97 0 1 686 21 36 0 0 chrX 13242222 13242250 -9180577 + AT_rich Low_complexity Low_complexity 1 28 0 1 686 287 84 40 40 chrX 13243113 13243187 -9179640 + T-rich Low_complexity Low_complexity 4 77 0 1 686 41 0 0 0 chrX 13243499 13243540 -9179287 + AT_rich Low_complexity Low_complexity 1 41 0 1 686 23 0 0 0 chrX 13243583 13243606 -9179221 + AT_rich Low_complexity Low_complexity 1 23 0 1 686 200 260 0 0 chrX 13244460 13244510 -9178317 + CT-rich Low_complexity Low_complexity 5 54 0 1 686 285 75 0 0 chrX 13244978 13245018 -9177809 + (CATTT)n Simple_repeat Simple_repeat 1 40 0 1 686 183 139 0 0 chrX 13245441 13245477 -9177350 + (T)n Simple_repeat Simple_repeat 1 36 0 1 686 23 33 0 0 chrX 13245721 13245751 -9177076 + AT_rich Low_complexity Low_complexity 1 30 0 1 686 200 59 0 29 chrX 13246071 13246106 -9176721 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 1 686 201 167 0 0 chrX 13246571 13246607 -9176220 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 686 21 0 0 0 chrX 13246944 13246965 -9175862 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 297 135 0 0 chrX 13247531 13247583 -9175244 + (GCTG)n Simple_repeat Simple_repeat 4 55 0 1 686 192 40 0 0 chrX 13247587 13247612 -9175215 + (A)n Simple_repeat Simple_repeat 1 25 0 1 686 222 91 0 0 chrX 13247980 13248013 -9174814 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 686 195 42 0 0 chrX 13249008 13249032 -9173795 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 686 29 0 0 0 chrX 13249108 13249137 -9173690 + AT_rich Low_complexity Low_complexity 1 29 0 1 686 234 0 0 0 chrX 13249245 13249271 -9173556 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 686 219 88 0 0 chrX 13250364 13250398 -9172429 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 686 201 94 0 0 chrX 13250994 13251026 -9171801 + (T)n Simple_repeat Simple_repeat 1 32 0 1 686 211 194 19 0 chrX 13251424 13251496 -9171331 + T-rich Low_complexity Low_complexity 1 73 0 1 686 240 143 14 28 chrX 13251579 13251651 -9171176 + T-rich Low_complexity Low_complexity 2 72 0 1 686 225 94 0 0 chrX 13253491 13253523 -9169304 + (TTCTG)n Simple_repeat Simple_repeat 4 35 0 1 686 221 185 0 53 chrX 13253881 13253938 -9168889 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 686 2432 264 33 44 chrX 13254758 13254975 -9167852 - SAR_DM Satellite Satellite -193 1775 699 1 686 2576 83 6 3 chrX 13254975 13255335 -9167492 + XDMR Unknown Unknown 1 361 0 1 686 2571 86 6 3 chrX 13255335 13255695 -9167132 + XDMR Unknown Unknown 1 361 0 1 686 2685 72 3 0 chrX 13255695 13256055 -9166772 + XDMR Unknown Unknown 1 361 0 1 686 2621 78 6 3 chrX 13256055 13256415 -9166412 + XDMR Unknown Unknown 1 361 0 1 686 682 228 22 11 chrX 13256415 13256597 -9166230 + XDMR Unknown Unknown 1 184 -177 1 686 2432 264 33 44 chrX 13256415 13256553 -9166274 - SAR_DM Satellite Satellite -193 698 1 1 686 234 62 0 0 chrX 13256941 13256973 -9165854 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 686 202 146 24 0 chrX 13261085 13261126 -9161701 + (TAA)n Simple_repeat Simple_repeat 3 44 0 1 686 195 42 0 0 chrX 13262096 13262120 -9160707 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 686 180 111 0 0 chrX 13264159 13264186 -9158641 + (CCG)n Simple_repeat Simple_repeat 2 28 0 1 686 201 147 0 0 chrX 13265232 13265266 -9157561 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 686 210 191 0 0 chrX 13265457 13265499 -9157328 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 686 21 0 0 0 chrX 13265798 13265819 -9157008 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 36 40 0 0 chrX 13266123 13266173 -9156654 + AT_rich Low_complexity Low_complexity 1 50 0 1 686 212 267 17 0 chrX 13266469 13266529 -9156298 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 1 686 215 193 34 34 chrX 13268587 13268646 -9154181 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1 686 256 234 0 15 chrX 13269959 13270024 -9152803 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 686 37 0 0 0 chrX 13270943 13270980 -9151847 + AT_rich Low_complexity Low_complexity 1 37 0 1 686 23 0 0 0 chrX 13274167 13274190 -9148637 + AT_rich Low_complexity Low_complexity 1 23 0 1 686 248 120 20 0 chrX 13274885 13274935 -9147892 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 686 185 154 0 25 chrX 13275140 13275180 -9147647 + GA-rich Low_complexity Low_complexity 2 40 0 1 686 198 0 0 0 chrX 13275449 13275471 -9147356 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 686 235 113 19 19 chrX 13275530 13275584 -9147243 + (TTGG)n Simple_repeat Simple_repeat 1 54 0 1 686 180 0 0 0 chrX 13275608 13275628 -9147199 + (TTG)n Simple_repeat Simple_repeat 1 20 0 1 686 285 29 0 0 chrX 13275632 13275666 -9147161 + (TAG)n Simple_repeat Simple_repeat 3 36 0 1 686 300 27 0 0 chrX 13276477 13276514 -9146313 + (TAG)n Simple_repeat Simple_repeat 3 39 0 1 686 195 139 0 0 chrX 13277182 13277218 -9145609 + (T)n Simple_repeat Simple_repeat 1 36 0 1 686 205 204 0 18 chrX 13277353 13277408 -9145419 + (TTG)n Simple_repeat Simple_repeat 1 54 0 1 686 222 143 0 0 chrX 13277449 13277498 -9145329 + (TTG)n Simple_repeat Simple_repeat 1 49 0 1 686 198 237 0 0 chrX 13277558 13277634 -9145193 + (TTG)n Simple_repeat Simple_repeat 3 78 0 1 686 189 154 0 0 chrX 13278137 13278176 -9144651 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 686 284 159 0 42 chrX 13278381 13278453 -9144374 + (CCG)n Simple_repeat Simple_repeat 3 71 0 1 686 24 0 0 0 chrX 13281699 13281723 -9141104 + AT_rich Low_complexity Low_complexity 1 24 0 1 686 212 154 0 0 chrX 13283079 13283118 -9139709 + (CGATG)n Simple_repeat Simple_repeat 5 43 0 1 686 201 39 0 0 chrX 13283721 13283747 -9139080 + (A)n Simple_repeat Simple_repeat 1 26 0 1 686 22 35 0 0 chrX 13284213 13284242 -9138585 + AT_rich Low_complexity Low_complexity 1 29 0 1 686 28 29 0 0 chrX 13284622 13284657 -9138170 + AT_rich Low_complexity Low_complexity 1 35 0 1 686 224 100 25 0 chrX 13284880 13284920 -9137907 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 686 183 80 0 0 chrX 13285948 13285973 -9136854 + (T)n Simple_repeat Simple_repeat 1 25 0 1 686 27 0 0 0 chrX 13287346 13287373 -9135454 + AT_rich Low_complexity Low_complexity 1 27 0 1 686 202 217 0 0 chrX 13288335 13288381 -9134446 + (TATATG)n Simple_repeat Simple_repeat 5 50 0 1 686 27 29 0 0 chrX 13290577 13290611 -9132216 + AT_rich Low_complexity Low_complexity 1 34 0 1 686 217 0 61 0 chrX 13294650 13294683 -9128144 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 686 30 0 0 0 chrX 13294837 13294867 -9127960 + AT_rich Low_complexity Low_complexity 1 30 0 1 686 2171 0 0 30 chrX 13295576 13295845 -9126982 + LINEJ1_DM LINE Jockey 4760 5020 0 1 686 180 0 0 0 chrX 13295845 13295865 -9126962 + (A)n Simple_repeat Simple_repeat 1 20 0 1 686 22 35 0 0 chrX 13295876 13295905 -9126922 + AT_rich Low_complexity Low_complexity 1 29 0 1 686 195 42 0 0 chrX 13296757 13296781 -9126046 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 686 226 240 39 39 chrX 13297097 13297175 -9125652 + BS2 LINE Jockey 153 230 -4491 1 686 24 0 0 0 chrX 13297349 13297373 -9125454 + AT_rich Low_complexity Low_complexity 1 24 0 1 686 256 152 30 0 chrX 13298483 13298549 -9124278 + T-rich Low_complexity Low_complexity 5 72 0 1 686 294 95 0 0 chrX 13299231 13299273 -9123554 + (ACCG)n Simple_repeat Simple_repeat 3 44 0 1 686 24 0 0 0 chrX 13299621 13299645 -9123182 + AT_rich Low_complexity Low_complexity 1 24 0 1 686 25 0 0 0 chrX 13302128 13302153 -9120674 + AT_rich Low_complexity Low_complexity 1 25 0 1 686 216 67 0 0 chrX 13305569 13305599 -9117228 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 686 23 0 0 0 chrX 13306464 13306487 -9116340 + AT_rich Low_complexity Low_complexity 1 23 0 1 686 27 0 0 0 chrX 13306958 13306985 -9115842 + AT_rich Low_complexity Low_complexity 1 27 0 1 686 2441 251 16 18 chrX 13317089 13317922 -9104905 + SAR_DM Satellite Satellite 246 1076 -396 1 686 31 26 0 0 chrX 13318751 13318789 -9104038 + AT_rich Low_complexity Low_complexity 1 38 0 1 686 288 0 0 0 chrX 13319042 13319074 -9103753 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 686 182 59 0 81 chrX 13320087 13320124 -9102703 + (A)n Simple_repeat Simple_repeat 1 34 0 1 686 23 78 0 0 chrX 13320474 13320525 -9102302 + AT_rich Low_complexity Low_complexity 1 51 0 1 686 237 246 18 0 chrX 13321861 13321918 -9100909 + (CATA)n Simple_repeat Simple_repeat 3 60 0 1 686 25 0 0 0 chrX 13322241 13322266 -9100561 + AT_rich Low_complexity Low_complexity 1 25 0 1 686 195 224 0 0 chrX 13322681 13322757 -9100070 + A-rich Low_complexity Low_complexity 1 76 0 1 686 205 186 0 0 chrX 13322901 13322944 -9099883 + T-rich Low_complexity Low_complexity 1 43 0 1 686 9853 3 2 1 chrX 13323551 13324614 -9098213 + LINEJ1_DM LINE Jockey 3957 5020 0 1 686 183 42 0 0 chrX 13324614 13324638 -9098189 + (A)n Simple_repeat Simple_repeat 1 24 0 1 686 201 39 0 0 chrX 13325073 13325099 -9097728 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 686 198 0 0 0 chrX 13326501 13326523 -9096304 + (A)n Simple_repeat Simple_repeat 1 22 0 1 686 227 305 12 0 chrX 13328153 13328235 -9094592 + (CA)n Simple_repeat Simple_repeat 1 83 0 1 686 182 91 30 0 chrX 13328541 13328574 -9094253 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 686 183 42 0 0 chrX 13329992 13330016 -9092811 + (TTAAA)n Simple_repeat Simple_repeat 5 28 0 1 686 23 0 0 0 chrX 13332404 13332427 -9090400 + AT_rich Low_complexity Low_complexity 1 23 0 1 686 25 31 0 0 chrX 13334098 13334130 -9088697 + AT_rich Low_complexity Low_complexity 1 32 0 1 686 293 68 23 0 chrX 13334493 13334537 -9088290 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 686 230 388 6 12 chrX 13335005 13335177 -9087650 + (CTG)n Simple_repeat Simple_repeat 2 172 0 1 686 214 284 22 11 chrX 13335446 13335535 -9087292 + (CTG)n Simple_repeat Simple_repeat 3 92 0 1 686 348 64 0 0 chrX 13336103 13336150 -9086677 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 686 21 0 0 0 chrX 13336253 13336274 -9086553 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 372 22 0 0 chrX 13337474 13337519 -9085308 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 686 294 250 0 0 chrX 13338623 13338707 -9084120 + A-rich Low_complexity Low_complexity 1 84 0 1 686 21 36 0 0 chrX 13339261 13339289 -9083538 + AT_rich Low_complexity Low_complexity 1 28 0 1 686 227 157 20 0 chrX 13340313 13340364 -9082463 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 686 222 156 0 0 chrX 13343201 13343246 -9079581 + A-rich Low_complexity Low_complexity 5 49 0 1 686 24 0 0 0 chrX 13343397 13343421 -9079406 + AT_rich Low_complexity Low_complexity 1 24 0 1 686 26 0 0 0 chrX 13343523 13343549 -9079278 + AT_rich Low_complexity Low_complexity 1 26 0 1 686 45 0 0 0 chrX 13345069 13345114 -9077713 + AT_rich Low_complexity Low_complexity 1 45 0 1 686 268 147 0 26 chrX 13345187 13345264 -9077563 + (CTG)n Simple_repeat Simple_repeat 1 75 0 1 686 267 31 0 0 chrX 13345562 13345594 -9077233 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 1 686 204 40 0 0 chrX 13346311 13346336 -9076491 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 686 21 71 0 0 chrX 13346691 13346733 -9076094 + AT_rich Low_complexity Low_complexity 1 42 0 1 686 235 241 0 0 chrX 13347093 13347151 -9075676 + A-rich Low_complexity Low_complexity 1 58 0 1 686 21 0 0 0 chrX 13347230 13347251 -9075576 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 22 56 0 0 chrX 13347601 13347637 -9075190 + AT_rich Low_complexity Low_complexity 1 36 0 1 686 249 33 0 0 chrX 13347916 13347946 -9074881 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 686 183 42 0 0 chrX 13348589 13348613 -9074214 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 686 195 100 0 0 chrX 13348616 13348646 -9074181 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 686 183 80 0 0 chrX 13349094 13349119 -9073708 + (A)n Simple_repeat Simple_repeat 1 25 0 1 686 21 0 0 0 chrX 13349121 13349142 -9073685 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 336 24 0 0 chrX 13351223 13351264 -9071563 + (TGG)n Simple_repeat Simple_repeat 2 42 0 1 686 342 216 23 23 chrX 13351283 13351411 -9071416 + (TGG)n Simple_repeat Simple_repeat 2 129 0 1 686 23 0 0 0 chrX 13351553 13351576 -9071251 + AT_rich Low_complexity Low_complexity 1 23 0 1 686 26 0 0 0 chrX 13352741 13352767 -9070060 + AT_rich Low_complexity Low_complexity 1 26 0 1 686 249 151 0 0 chrX 13353400 13353453 -9069374 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 686 21 0 0 0 chrX 13353982 13354003 -9068824 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 276 30 0 0 chrX 13355143 13355176 -9067651 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 686 189 0 0 0 chrX 13356081 13356102 -9066725 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1 686 21 0 0 0 chrX 13356462 13356483 -9066344 + AT_rich Low_complexity Low_complexity 1 21 0 1 686 198 118 0 0 chrX 13356849 13356883 -9065944 + (TTTTA)n Simple_repeat Simple_repeat 4 37 0 1 686 207 0 0 0 chrX 13357198 13357221 -9065606 + (A)n Simple_repeat Simple_repeat 1 23 0 1 686 2295 4 0 0 chrX 13357732 13357999 -9064828 + MDG3_LTR LTR Gypsy 1 267 0 1 686 42915 0 0 0 chrX 13357998 13362985 -9059842 + MDG3_I LTR Gypsy 1 4986 0 1 686 2295 4 0 0 chrX 13362985 13363252 -9059575 + MDG3_LTR LTR Gypsy 1 267 0 1 686 291 150 0 0 chrX 13364342 13364402 -9058425 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 686 195 146 0 0 chrX 13365261 13365302 -9057525 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 686 207 100 0 0 chrX 13365494 13365524 -9057303 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 686 482 146 19 10 chrX 13368354 13368458 -9054369 + XDMR Unknown Unknown 84 188 -173 1 686 1033 64 0 0 chrX 13368441 13368582 -9054245 - XDMR Unknown Unknown -220 141 1 1 686 2392 82 3 0 chrX 13368582 13368936 -9053891 - XDMR Unknown Unknown 0 361 7 1 686 46 62 0 0 chrX 13368936 13369017 -9053810 + AT_rich Low_complexity Low_complexity 1 81 0 1 687 251 239 11 11 chrX 13369512 13369601 -9053226 + A-rich Low_complexity Low_complexity 2 90 0 1 687 198 143 0 0 chrX 13370496 13370531 -9052296 + (TAAAG)n Simple_repeat Simple_repeat 5 39 0 1 687 222 136 0 0 chrX 13371012 13371056 -9051771 + (A)n Simple_repeat Simple_repeat 1 44 0 1 687 216 167 0 0 chrX 13373939 13373987 -9048840 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 687 192 40 0 0 chrX 13375610 13375635 -9047192 + (CAG)n Simple_repeat Simple_repeat 2 26 0 1 687 21 0 0 0 chrX 13375945 13375966 -9046861 + AT_rich Low_complexity Low_complexity 1 21 0 1 687 22 35 0 0 chrX 13376464 13376493 -9046334 + AT_rich Low_complexity Low_complexity 1 29 0 1 687 207 0 0 0 chrX 13377225 13377248 -9045579 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1 687 212 204 35 53 chrX 13378004 13378061 -9044766 + (TATG)n Simple_repeat Simple_repeat 4 59 0 1 687 205 189 0 0 chrX 13379399 13379436 -9043391 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 687 223 206 16 16 chrX 13381147 13381211 -9041616 + T-rich Low_complexity Low_complexity 4 67 0 1 687 198 0 0 0 chrX 13381568 13381590 -9041237 + (A)n Simple_repeat Simple_repeat 1 22 0 1 687 207 100 0 0 chrX 13384727 13384757 -9038070 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1 687 210 37 0 0 chrX 13387020 13387047 -9035780 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 687 282 257 14 0 chrX 13387846 13387916 -9034911 + (CAGAGA)n Simple_repeat Simple_repeat 4 74 0 1 687 192 40 0 0 chrX 13387959 13387984 -9034843 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 687 281 68 0 22 chrX 13388220 13388265 -9034562 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 687 213 159 0 0 chrX 13388943 13388987 -9033840 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 687 201 94 0 0 chrX 13390933 13390965 -9031862 + (CAGT)n Simple_repeat Simple_repeat 3 34 0 1 687 195 100 0 0 chrX 13391666 13391696 -9031131 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 687 216 67 0 0 chrX 13391748 13391778 -9031049 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 687 22 35 0 0 chrX 13392147 13392176 -9030651 + AT_rich Low_complexity Low_complexity 1 29 0 1 687 522 114 0 0 chrX 13392947 13393026 -9029801 + (TGAG)n Simple_repeat Simple_repeat 4 82 0 1 687 552 120 0 0 chrX 13395405 13395505 -9027322 + (ACTG)n Simple_repeat Simple_repeat 4 103 0 1 687 22 0 0 0 chrX 13395918 13395940 -9026887 + AT_rich Low_complexity Low_complexity 1 22 0 1 687 180 0 0 0 chrX 13395946 13395966 -9026861 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 687 204 213 0 0 chrX 13396979 13397026 -9025801 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 1 687 241 233 14 0 chrX 13397208 13397281 -9025546 + CT-rich Low_complexity Low_complexity 3 76 0 1 687 269 198 12 0 chrX 13398633 13398719 -9024108 + (CA)n Simple_repeat Simple_repeat 2 88 0 1 687 333 100 0 0 chrX 13400441 13400491 -9022336 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 687 23 54 0 0 chrX 13401109 13401146 -9021681 + AT_rich Low_complexity Low_complexity 1 37 0 1 687 192 163 0 0 chrX 13401275 13401318 -9021509 + T-rich Low_complexity Low_complexity 1 43 0 1 687 23 33 0 0 chrX 13401876 13401906 -9020921 + AT_rich Low_complexity Low_complexity 1 30 0 1 687 228 143 0 0 chrX 13403380 13403422 -9019405 + (AAATG)n Simple_repeat Simple_repeat 5 46 0 1 687 22 0 0 0 chrX 13403995 13404017 -9018810 + AT_rich Low_complexity Low_complexity 1 22 0 1 687 210 162 0 0 chrX 13405033 13405070 -9017757 + (CAAAT)n Simple_repeat Simple_repeat 1 37 0 1 687 204 40 0 0 chrX 13406308 13406333 -9016494 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 687 23 68 0 0 chrX 13406478 13406522 -9016305 + AT_rich Low_complexity Low_complexity 1 44 0 1 687 192 40 0 0 chrX 13407746 13407771 -9015056 + (CTG)n Simple_repeat Simple_repeat 1 25 0 1 687 186 43 0 0 chrX 13408459 13408482 -9014345 + (AAATG)n Simple_repeat Simple_repeat 4 26 0 1 687 233 274 0 0 chrX 13408694 13408756 -9014071 + (CAGT)n Simple_repeat Simple_repeat 1 62 0 1 687 210 250 0 0 chrX 13409566 13409614 -9013213 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 1 687 296 148 0 16 chrX 13409868 13409930 -9012897 + (CTAAA)n Simple_repeat Simple_repeat 4 64 0 1 687 21 57 0 0 chrX 13410293 13410328 -9012499 + AT_rich Low_complexity Low_complexity 1 35 0 1 687 518 118 0 11 chrX 13412173 13412267 -9010560 + (TC)n Simple_repeat Simple_repeat 2 94 0 1 687 213 200 0 0 chrX 13412575 13412620 -9010207 + GA-rich Low_complexity Low_complexity 1 45 0 1 687 207 88 0 0 chrX 13413598 13413632 -9009195 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 687 336 102 0 0 chrX 13414195 13414244 -9008583 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 687 296 83 21 0 chrX 13414463 13414511 -9008316 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 687 543 66 0 0 chrX 13417195 13417271 -9005556 + (CAG)n Simple_repeat Simple_repeat 1 76 0 1 687 309 109 0 0 chrX 13417534 13417589 -9005238 + (CAG)n Simple_repeat Simple_repeat 2 56 0 1 687 24 32 0 0 chrX 13418000 13418031 -9004796 + AT_rich Low_complexity Low_complexity 1 31 0 1 687 180 0 0 0 chrX 13418456 13418476 -9004351 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 687 30 59 0 0 chrX 13419307 13419358 -9003469 + AT_rich Low_complexity Low_complexity 1 51 0 1 687 210 143 0 0 chrX 13419880 13419915 -9002912 + (ATG)n Simple_repeat Simple_repeat 1 35 0 1 687 23 0 0 0 chrX 13420878 13420901 -9001926 + AT_rich Low_complexity Low_complexity 1 23 0 1 687 231 173 0 0 chrX 13422438 13422490 -9000337 + GA-rich Low_complexity Low_complexity 2 53 0 1 687 3100 194 10 16 chrX 13424293 13425000 -8997827 + SAR_DM Satellite Satellite 247 949 -523 1 687 201 132 0 0 chrX 13425405 13425443 -8997384 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 687 21 0 0 0 chrX 13425776 13425797 -8997030 + AT_rich Low_complexity Low_complexity 1 21 0 1 687 186 43 0 0 chrX 13426050 13426073 -8996754 + (CATTT)n Simple_repeat Simple_repeat 3 25 0 1 687 22 0 0 0 chrX 13427102 13427124 -8995703 + AT_rich Low_complexity Low_complexity 1 22 0 1 687 189 74 0 0 chrX 13427673 13427700 -8995127 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 1 687 291 164 0 0 chrX 13429759 13429820 -8993007 + (ATG)n Simple_repeat Simple_repeat 3 63 0 1 687 31 26 0 0 chrX 13430188 13430226 -8992601 + AT_rich Low_complexity Low_complexity 1 38 0 1 687 225 0 0 0 chrX 13430557 13430582 -8992245 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 687 230 200 0 20 chrX 13431357 13431408 -8991419 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 1 687 201 121 0 0 chrX 13432203 13432236 -8990591 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 1 687 249 146 0 0 chrX 13433129 13433177 -8989650 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 687 186 43 0 0 chrX 13434147 13434170 -8988657 + (CAGAC)n Simple_repeat Simple_repeat 5 27 0 1 687 26 64 0 0 chrX 13435112 13435159 -8987668 + AT_rich Low_complexity Low_complexity 1 47 0 1 687 372 271 16 0 chrX 13435754 13435883 -8986944 + (ACTG)n Simple_repeat Simple_repeat 1 131 0 1 687 23 0 0 0 chrX 13438490 13438513 -8984314 + AT_rich Low_complexity Low_complexity 1 23 0 1 687 29 0 0 0 chrX 13438797 13438826 -8984001 + AT_rich Low_complexity Low_complexity 1 29 0 1 687 26 0 0 0 chrX 13438902 13438928 -8983899 + AT_rich Low_complexity Low_complexity 1 26 0 1 687 189 74 0 0 chrX 13439172 13439199 -8983628 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 687 189 74 0 0 chrX 13439452 13439479 -8983348 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 1 687 22 0 0 0 chrX 13440349 13440371 -8982456 + AT_rich Low_complexity Low_complexity 1 22 0 1 687 23 0 0 0 chrX 13440429 13440452 -8982375 + AT_rich Low_complexity Low_complexity 1 23 0 1 687 22 0 0 0 chrX 13441248 13441270 -8981557 + AT_rich Low_complexity Low_complexity 1 22 0 1 687 23 0 0 0 chrX 13442469 13442492 -8980335 + AT_rich Low_complexity Low_complexity 1 23 0 1 687 204 40 0 0 chrX 13445789 13445814 -8977013 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1 687 201 39 0 0 chrX 13446040 13446066 -8976761 + (TATAA)n Simple_repeat Simple_repeat 4 29 0 1 687 24 0 0 0 chrX 13446113 13446137 -8976690 + AT_rich Low_complexity Low_complexity 1 24 0 1 687 222 146 12 24 chrX 13446235 13446319 -8976508 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 687 198 0 0 0 chrX 13446424 13446446 -8976381 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 687 22 70 0 0 chrX 13446856 13446899 -8975928 + AT_rich Low_complexity Low_complexity 1 43 0 1 687 201 171 0 0 chrX 13447737 13447772 -8975055 + (TTG)n Simple_repeat Simple_repeat 3 37 0 1 687 261 139 0 0 chrX 13448099 13448142 -8974685 + (TGG)n Simple_repeat Simple_repeat 2 44 0 1 687 417 70 0 0 chrX 13448396 13448453 -8974374 + (CAT)n Simple_repeat Simple_repeat 2 58 0 1 687 25 0 0 0 chrX 13448789 13448814 -8974013 + AT_rich Low_complexity Low_complexity 1 25 0 1 687 21 82 0 0 chrX 13449296 13449345 -8973482 + AT_rich Low_complexity Low_complexity 1 49 0 1 687 26 0 0 0 chrX 13450538 13450564 -8972263 + AT_rich Low_complexity Low_complexity 1 26 0 1 687 186 43 0 0 chrX 13453803 13453826 -8969001 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 687 21 57 0 0 chrX 13454046 13454081 -8968746 + AT_rich Low_complexity Low_complexity 1 35 0 1 687 22 35 0 0 chrX 13455422 13455451 -8967376 + AT_rich Low_complexity Low_complexity 1 29 0 1 687 21 36 0 0 chrX 13456872 13456900 -8965927 + AT_rich Low_complexity Low_complexity 1 28 0 1 687 239 182 0 13 chrX 13459035 13459113 -8963714 + CT-rich Low_complexity Low_complexity 1 77 0 1 687 195 125 0 0 chrX 13459208 13459248 -8963579 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 687 261 0 0 0 chrX 13460753 13460782 -8962045 + (TCC)n Simple_repeat Simple_repeat 1 29 0 1 687 207 100 0 0 chrX 13460841 13460871 -8961956 + (CACCAT)n Simple_repeat Simple_repeat 2 31 0 1 687 21 0 0 0 chrX 13461660 13461681 -8961146 + AT_rich Low_complexity Low_complexity 1 21 0 1 687 200 111 0 27 chrX 13462954 13462991 -8959836 + (AAATG)n Simple_repeat Simple_repeat 2 37 0 1 687 231 214 0 0 chrX 13463403 13463459 -8959368 + T-rich Low_complexity Low_complexity 1 56 0 1 687 267 103 0 0 chrX 13463504 13463543 -8959284 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 687 294 115 0 0 chrX 13464604 13464656 -8958171 + (T)n Simple_repeat Simple_repeat 1 52 0 1 687 205 162 0 0 chrX 13464880 13464917 -8957910 + G-rich Low_complexity Low_complexity 1 37 0 1 687 23 0 0 0 chrX 13465723 13465746 -8957081 + AT_rich Low_complexity Low_complexity 1 23 0 1 687 198 0 0 0 chrX 13467071 13467093 -8955734 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 687 22 0 0 0 chrX 13467311 13467333 -8955494 + AT_rich Low_complexity Low_complexity 1 22 0 1 687 29 0 0 0 chrX 13467368 13467397 -8955430 + AT_rich Low_complexity Low_complexity 1 29 0 1 687 29 60 0 0 chrX 13467723 13467773 -8955054 + AT_rich Low_complexity Low_complexity 1 50 0 1 687 230 164 0 121 chrX 13468037 13468120 -8954707 + GA-rich Low_complexity Low_complexity 4 76 0 1 687 204 158 0 0 chrX 13469013 13469051 -8953776 + (CCCA)n Simple_repeat Simple_repeat 3 40 0 1 687 189 94 0 0 chrX 13473858 13473890 -8948937 + (TAA)n Simple_repeat Simple_repeat 3 34 0 1 687 270 81 0 0 chrX 13474410 13474447 -8948380 + (TTCC)n Simple_repeat Simple_repeat 1 37 0 1 687 267 31 0 0 chrX 13475568 13475600 -8947227 + (TTCGG)n Simple_repeat Simple_repeat 3 34 0 1 687 248 214 0 0 chrX 13477689 13477745 -8945082 + GA-rich Low_complexity Low_complexity 2 57 0 1 687 412 261 10 15 chrX 13479370 13479550 -8943277 - XDMR_DM Unknown Unknown -182 179 1 1 687 392 261 12 42 chrX 13479416 13479584 -8943243 + SAR_DM Satellite Satellite 585 747 -725 1 687 180 77 0 0 chrX 13480735 13480761 -8942066 + (CATAC)n Simple_repeat Simple_repeat 2 27 0 1 687 186 71 0 0 chrX 13480813 13480841 -8941986 + (T)n Simple_repeat Simple_repeat 1 28 0 1 687 198 0 0 0 chrX 13482676 13482698 -8940129 + (CATCG)n Simple_repeat Simple_repeat 1 22 0 1 687 222 37 0 0 chrX 13483762 13483789 -8939038 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 687 239 238 9 47 chrX 13484024 13484130 -8938697 + (CAA)n Simple_repeat Simple_repeat 3 104 0 1 687 423 130 0 0 chrX 13484134 13484211 -8938616 + (CAG)n Simple_repeat Simple_repeat 1 77 0 1 687 369 75 0 0 chrX 13484325 13484378 -8938449 + (CAA)n Simple_repeat Simple_repeat 1 53 0 1 687 246 81 0 0 chrX 13485733 13485770 -8937057 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 687 25 0 0 0 chrX 13486618 13486643 -8936184 + AT_rich Low_complexity Low_complexity 1 25 0 1 687 21 57 0 0 chrX 13486741 13486776 -8936051 + AT_rich Low_complexity Low_complexity 1 35 0 1 687 28 0 0 0 chrX 13487146 13487174 -8935653 + AT_rich Low_complexity Low_complexity 1 28 0 1 687 783 138 0 0 chrX 13487830 13487982 -8934845 + (TCC)n Simple_repeat Simple_repeat 2 153 0 1 687 200 239 0 56 chrX 13488146 13488217 -8934610 + A-rich Low_complexity Low_complexity 3 69 0 1 687 25 51 0 0 chrX 13489694 13489733 -8933094 + AT_rich Low_complexity Low_complexity 1 39 0 1 687 202 267 33 0 chrX 13490284 13490344 -8932483 + GA-rich Low_complexity Low_complexity 3 64 0 1 687 37 0 0 0 chrX 13491242 13491279 -8931548 + AT_rich Low_complexity Low_complexity 1 37 0 1 687 28 0 0 0 chrX 13491480 13491508 -8931319 + AT_rich Low_complexity Low_complexity 1 28 0 1 687 189 132 0 0 chrX 13491715 13491753 -8931074 + (T)n Simple_repeat Simple_repeat 1 38 0 1 687 22 35 0 0 chrX 13492603 13492632 -8930195 + AT_rich Low_complexity Low_complexity 1 29 0 1 687 266 202 12 25 chrX 13493013 13493094 -8929733 + A-rich Low_complexity Low_complexity 3 82 0 1 687 22 0 0 0 chrX 13493565 13493587 -8929240 + AT_rich Low_complexity Low_complexity 1 22 0 1 687 220 106 28 83 chrX 13493630 13493702 -8929125 + (TTG)n Simple_repeat Simple_repeat 1 68 0 1 687 188 67 33 0 chrX 13494511 13494541 -8928286 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 687 234 81 0 0 chrX 13495727 13495764 -8927063 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 687 231 88 0 0 chrX 13495900 13495934 -8926893 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 1 687 201 232 0 0 chrX 13495949 13496018 -8926809 + (TTG)n Simple_repeat Simple_repeat 1 69 0 1 687 31 26 0 0 chrX 13496082 13496120 -8926707 + AT_rich Low_complexity Low_complexity 1 38 0 1 687 26 50 0 0 chrX 13496197 13496237 -8926590 + AT_rich Low_complexity Low_complexity 1 40 0 1 687 22 35 0 0 chrX 13496355 13496384 -8926443 + AT_rich Low_complexity Low_complexity 1 29 0 1 687 270 106 0 0 chrX 13497184 13497231 -8925596 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 687 201 273 0 0 chrX 13497321 13497376 -8925451 + T-rich Low_complexity Low_complexity 1 55 0 1 687 21 0 0 0 chrX 13497656 13497677 -8925150 + AT_rich Low_complexity Low_complexity 1 21 0 1 687 26 0 0 0 chrX 13497780 13497806 -8925021 + AT_rich Low_complexity Low_complexity 1 26 0 1 687 245 135 0 19 chrX 13497915 13497968 -8924859 + (CATTA)n Simple_repeat Simple_repeat 2 53 0 1 687 27 0 0 0 chrX 13498066 13498093 -8924734 + AT_rich Low_complexity Low_complexity 1 27 0 1 687 210 260 14 14 chrX 13498241 13498315 -8924512 + (TATATG)n Simple_repeat Simple_repeat 4 77 0 1 687 216 0 0 0 chrX 13498855 13498879 -8923948 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 688 22 0 0 0 chrX 13503368 13503390 -8919437 + AT_rich Low_complexity Low_complexity 1 22 0 1 688 192 77 0 0 chrX 13507753 13507779 -8915048 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 688 244 254 0 0 chrX 13508887 13508942 -8913885 + (CCG)n Simple_repeat Simple_repeat 1 55 0 1 688 189 154 0 0 chrX 13509115 13509154 -8913673 + (CTG)n Simple_repeat Simple_repeat 1 39 0 1 688 213 121 0 0 chrX 13510218 13510251 -8912576 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 688 205 238 0 0 chrX 13512227 13512269 -8910558 + (CCCGAA)n Simple_repeat Simple_repeat 6 47 0 1 688 27 29 0 0 chrX 13513426 13513460 -8909367 + AT_rich Low_complexity Low_complexity 1 34 0 1 688 28 48 0 0 chrX 13518600 13518642 -8904185 + AT_rich Low_complexity Low_complexity 1 42 0 1 688 222 91 0 0 chrX 13519124 13519157 -8903670 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 688 216 186 0 0 chrX 13519234 13519277 -8903550 + GA-rich Low_complexity Low_complexity 1 43 0 1 688 226 192 0 19 chrX 13519360 13519413 -8903414 + ROO_I LTR Pao 690 741 -7515 1 688 202 293 0 33 chrX 13520561 13520621 -8902206 + (CACG)n Simple_repeat Simple_repeat 1 58 0 1 688 210 71 0 0 chrX 13521191 13521219 -8901608 + (AATTG)n Simple_repeat Simple_repeat 3 30 0 1 688 201 74 0 0 chrX 13521736 13521763 -8901064 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 1 688 203 260 40 14 chrX 13521879 13521953 -8900874 + (TTG)n Simple_repeat Simple_repeat 3 78 0 1 688 219 204 0 0 chrX 13522747 13522801 -8900026 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 688 21 0 0 0 chrX 13522920 13522941 -8899886 + AT_rich Low_complexity Low_complexity 1 21 0 1 688 180 0 0 0 chrX 13523894 13523914 -8898913 + (GGA)n Simple_repeat Simple_repeat 1 20 0 1 688 23 33 0 0 chrX 13525324 13525354 -8897473 + AT_rich Low_complexity Low_complexity 1 30 0 1 688 27 29 0 0 chrX 13525553 13525587 -8897240 + AT_rich Low_complexity Low_complexity 1 34 0 1 688 186 43 0 0 chrX 13525817 13525840 -8896987 + (TAA)n Simple_repeat Simple_repeat 1 23 0 1 688 210 37 0 0 chrX 13526821 13526848 -8895979 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 688 210 71 0 0 chrX 13527071 13527099 -8895728 + (TAA)n Simple_repeat Simple_repeat 1 28 0 1 688 24 0 0 0 chrX 13530330 13530354 -8892473 + AT_rich Low_complexity Low_complexity 1 24 0 1 688 210 71 0 0 chrX 13530905 13530933 -8891894 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 688 23 0 0 0 chrX 13532678 13532701 -8890126 + AT_rich Low_complexity Low_complexity 1 23 0 1 688 218 140 52 17 chrX 13533272 13533330 -8889497 + (TTG)n Simple_repeat Simple_repeat 3 62 0 1 688 43 20 0 0 chrX 13536698 13536748 -8886079 + AT_rich Low_complexity Low_complexity 1 50 0 1 688 31 58 0 0 chrX 13537399 13537451 -8885376 + AT_rich Low_complexity Low_complexity 1 52 0 1 688 23 0 0 0 chrX 13537913 13537936 -8884891 + AT_rich Low_complexity Low_complexity 1 23 0 1 688 238 196 30 54 chrX 13538938 13539050 -8883777 + A-rich Low_complexity Low_complexity 1 109 0 1 688 252 86 0 0 chrX 13539666 13539701 -8883126 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 688 265 333 0 0 chrX 13539711 13539795 -8883032 + (CAA)n Simple_repeat Simple_repeat 3 86 0 1 688 291 210 0 0 chrX 13541275 13541375 -8881452 + (TATATG)n Simple_repeat Simple_repeat 4 103 0 1 688 201 39 0 0 chrX 13541653 13541679 -8881148 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 688 220 286 0 0 chrX 13542222 13542292 -8880535 + T-rich Low_complexity Low_complexity 1 70 0 1 688 225 0 0 0 chrX 13542670 13542695 -8880132 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1 688 471 78 0 0 chrX 13542807 13542871 -8879956 + (AAATG)n Simple_repeat Simple_repeat 2 65 0 1 688 419 141 0 0 chrX 13543966 13544058 -8878769 + ROO_I LTR Pao 641 732 -7524 1 688 267 54 0 0 chrX 13544563 13544600 -8878227 + (ATG)n Simple_repeat Simple_repeat 3 39 0 1 688 225 65 0 0 chrX 13545929 13545960 -8876867 + (CTTTG)n Simple_repeat Simple_repeat 4 34 0 1 688 216 253 22 22 chrX 13546441 13546530 -8876297 + (CAGTT)n Simple_repeat Simple_repeat 2 90 0 1 688 260 212 0 0 chrX 13547211 13547277 -8875550 + ROO_I LTR Pao 667 732 -7524 1 688 267 31 0 0 chrX 13547496 13547528 -8875299 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 688 222 37 0 0 chrX 13548276 13548303 -8874524 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 1 688 183 42 0 0 chrX 13548624 13548648 -8874179 + (CGAAT)n Simple_repeat Simple_repeat 3 26 0 1 688 205 329 0 0 chrX 13550460 13550530 -8872297 + T-rich Low_complexity Low_complexity 4 73 0 1 688 211 72 23 23 chrX 13551277 13551320 -8871507 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 688 204 185 0 0 chrX 13551621 13551675 -8871152 + (TTTG)n Simple_repeat Simple_repeat 1 54 0 1 688 217 132 0 0 chrX 13552022 13552060 -8870767 + (A)n Simple_repeat Simple_repeat 1 38 0 1 688 21 71 0 0 chrX 13552075 13552117 -8870710 + AT_rich Low_complexity Low_complexity 1 42 0 1 688 240 35 0 0 chrX 13552811 13552840 -8869987 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 688 211 262 18 27 chrX 13553874 13553984 -8868843 + (ATTG)n Simple_repeat Simple_repeat 3 111 0 1 688 21 0 0 0 chrX 13554355 13554376 -8868451 + AT_rich Low_complexity Low_complexity 1 21 0 1 688 304 184 0 28 chrX 13555317 13555423 -8867404 + ROO_I LTR Pao 641 743 -7513 1 688 28 91 0 0 chrX 13557053 13557130 -8865697 + AT_rich Low_complexity Low_complexity 1 77 0 1 688 28 61 0 0 chrX 13557477 13557526 -8865301 + AT_rich Low_complexity Low_complexity 1 49 0 1 688 302 82 0 39 chrX 13557679 13557730 -8865097 + (TTA)n Simple_repeat Simple_repeat 3 51 0 1 688 297 89 0 0 chrX 13558215 13558260 -8864567 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 688 202 192 39 0 chrX 13558298 13558350 -8864477 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 688 212 188 21 0 chrX 13564044 13564092 -8858735 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 688 218 250 0 0 chrX 13564157 13564201 -8858626 + (CAG)n Simple_repeat Simple_repeat 3 46 0 1 688 23 33 0 0 chrX 13573586 13573616 -8849211 + AT_rich Low_complexity Low_complexity 1 30 0 1 688 243 79 0 0 chrX 13574406 13574444 -8848383 + (CTAAA)n Simple_repeat Simple_repeat 5 42 0 1 688 1825 261 74 36 chrX 13574698 13575565 -8847262 - SAR_DM Satellite Satellite -238 1234 335 1 688 38 75 0 0 chrX 13576542 13576622 -8846205 + AT_rich Low_complexity Low_complexity 1 80 0 1 688 22 0 0 0 chrX 13583538 13583560 -8839267 + AT_rich Low_complexity Low_complexity 1 22 0 1 688 294 125 0 0 chrX 13583850 13583898 -8838929 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 688 29 0 0 0 chrX 13585213 13585242 -8837585 + AT_rich Low_complexity Low_complexity 1 29 0 1 688 188 163 0 23 chrX 13585567 13585611 -8837216 + (CAGAGA)n Simple_repeat Simple_repeat 6 48 0 1 688 554 168 76 0 chrX 13586919 13587038 -8835789 + XDMR_DM Unknown Unknown 215 342 -18 1 688 1644 267 34 48 chrX 13586978 13587026 -8835801 - SAR_DM Satellite Satellite -353 1119 919 1 688 2134 123 8 6 chrX 13587026 13587386 -8835441 + XDMR Unknown Unknown 1 361 0 1 688 2410 97 3 0 chrX 13587386 13587746 -8835081 + XDMR Unknown Unknown 1 361 0 1 688 1644 267 34 48 chrX 13587746 13587913 -8834914 - SAR_DM Satellite Satellite -353 918 198 1 688 805 133 72 6 chrX 13587776 13587942 -8834885 + XDMR_DM Unknown Unknown 1 177 -183 1 688 186 143 0 0 chrX 13593858 13593893 -8828934 + (T)n Simple_repeat Simple_repeat 1 35 0 1 688 209 179 0 0 chrX 13594105 13594144 -8828683 + GA-rich Low_complexity Low_complexity 2 40 0 1 688 189 0 0 0 chrX 13598446 13598467 -8824360 + (T)n Simple_repeat Simple_repeat 1 21 0 1 688 180 0 0 0 chrX 13598629 13598649 -8824178 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 688 198 103 0 0 chrX 13601710 13601739 -8821088 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 688 212 0 36 0 chrX 13611186 13611214 -8811613 + (CAG)n Simple_repeat Simple_repeat 3 31 0 1 688 189 0 0 0 chrX 13611878 13611899 -8810928 + (T)n Simple_repeat Simple_repeat 1 21 0 1 688 285 128 0 0 chrX 13613006 13613053 -8809774 + (CAT)n Simple_repeat Simple_repeat 2 48 0 1 688 21 0 0 0 chrX 13613053 13613074 -8809753 + AT_rich Low_complexity Low_complexity 1 21 0 1 688 24 53 0 0 chrX 13616109 13616147 -8806680 + AT_rich Low_complexity Low_complexity 1 38 0 1 688 182 150 25 0 chrX 13621284 13621324 -8801503 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1 688 300 91 0 0 chrX 13621763 13621807 -8801020 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 688 234 264 0 23 chrX 13622464 13622540 -8800287 + CT-rich Low_complexity Low_complexity 1 74 0 1 688 276 163 69 39 chrX 13624700 13624802 -8798025 + T-rich Low_complexity Low_complexity 1 105 0 1 688 204 192 0 37 chrX 13625010 13625064 -8797763 + (CAA)n Simple_repeat Simple_repeat 1 52 0 1 688 282 132 0 0 chrX 13625220 13625273 -8797554 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 688 217 0 61 0 chrX 13625529 13625562 -8797265 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1 688 25 0 0 0 chrX 13626800 13626825 -8796002 + AT_rich Low_complexity Low_complexity 1 25 0 1 688 243 0 0 0 chrX 13628196 13628223 -8794604 + (CCA)n Simple_repeat Simple_repeat 3 29 0 1 688 21 0 0 0 chrX 13629170 13629191 -8793636 + AT_rich Low_complexity Low_complexity 1 21 0 1 688 24 0 0 0 chrX 13629439 13629463 -8793364 + AT_rich Low_complexity Low_complexity 1 24 0 1 688 231 191 0 0 chrX 13629761 13629824 -8793003 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 688 22 35 0 0 chrX 13630559 13630588 -8792239 + AT_rich Low_complexity Low_complexity 1 29 0 1 689 180 0 0 0 chrX 13633991 13634011 -8788816 + (CAA)n Simple_repeat Simple_repeat 3 22 0 1 689 255 256 0 0 chrX 13637290 13637376 -8785451 - ROO_I LTR Pao -7529 727 642 1 689 23 0 0 0 chrX 13638654 13638677 -8784150 + AT_rich Low_complexity Low_complexity 1 23 0 1 689 22 35 0 0 chrX 13639601 13639630 -8783197 + AT_rich Low_complexity Low_complexity 1 29 0 1 689 242 73 24 0 chrX 13639662 13639703 -8783124 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 689 232 183 0 48 chrX 13640490 13640553 -8782274 + T-rich Low_complexity Low_complexity 4 63 0 1 689 228 169 0 78 chrX 13640627 13640704 -8782123 + T-rich Low_complexity Low_complexity 4 74 0 1 689 259 243 0 0 chrX 13641178 13641248 -8781579 + A-rich Low_complexity Low_complexity 1 70 0 1 689 203 321 0 0 chrX 13641331 13641415 -8781412 + CT-rich Low_complexity Low_complexity 2 85 0 1 689 25 31 0 0 chrX 13641783 13641815 -8781012 + AT_rich Low_complexity Low_complexity 1 32 0 1 689 289 228 0 0 chrX 13642340 13642397 -8780430 + ROO_I LTR Pao 670 726 -7530 1 689 214 280 0 0 chrX 13642946 13642996 -8779831 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 1 689 226 213 13 26 chrX 13643168 13643245 -8779582 + A-rich Low_complexity Low_complexity 6 81 0 1 689 219 174 0 21 chrX 13644565 13644612 -8778215 + (TATATG)n Simple_repeat Simple_repeat 1 46 0 1 689 22 56 0 0 chrX 13650126 13650162 -8772665 + AT_rich Low_complexity Low_complexity 1 36 0 1 689 244 167 14 14 chrX 13650210 13650283 -8772544 + (TATG)n Simple_repeat Simple_repeat 4 76 0 1 689 27 29 0 0 chrX 13651012 13651046 -8771781 + AT_rich Low_complexity Low_complexity 1 34 0 1 689 26 64 0 0 chrX 13652611 13652658 -8770169 + AT_rich Low_complexity Low_complexity 1 47 0 1 689 264 59 0 0 chrX 13653460 13653494 -8769333 + (CGA)n Simple_repeat Simple_repeat 1 34 0 1 689 252 169 14 58 chrX 13656724 13656793 -8766034 + (CAGTT)n Simple_repeat Simple_repeat 3 68 0 1 689 209 239 14 27 chrX 13657243 13657316 -8765511 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 689 33 43 0 0 chrX 13657581 13657628 -8765199 + AT_rich Low_complexity Low_complexity 1 47 0 1 689 24 0 0 0 chrX 13658604 13658628 -8764199 + AT_rich Low_complexity Low_complexity 1 24 0 1 689 21 57 0 0 chrX 13660232 13660267 -8762560 + AT_rich Low_complexity Low_complexity 1 35 0 1 689 218 217 0 0 chrX 13660610 13660656 -8762171 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 689 223 167 0 0 chrX 13661682 13661724 -8761103 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 689 227 188 0 0 chrX 13663973 13664021 -8758806 + GA-rich Low_complexity Low_complexity 1 48 0 1 689 30 0 0 0 chrX 13664725 13664755 -8758072 + AT_rich Low_complexity Low_complexity 1 30 0 1 689 240 100 0 0 chrX 13669053 13669093 -8753734 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1 689 21 0 0 0 chrX 13670264 13670285 -8752542 + AT_rich Low_complexity Low_complexity 1 21 0 1 689 312 82 49 0 chrX 13671757 13671818 -8751009 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 689 248 28 0 53 chrX 13673602 13673640 -8749187 + (TATG)n Simple_repeat Simple_repeat 1 36 0 1 689 267 247 0 24 chrX 13674806 13674889 -8747938 + (TA)n Simple_repeat Simple_repeat 1 81 0 1 689 23 86 0 0 chrX 13675378 13675436 -8747391 + AT_rich Low_complexity Low_complexity 1 58 0 1 689 22 35 0 0 chrX 13677556 13677585 -8745242 + AT_rich Low_complexity Low_complexity 1 29 0 1 689 264 111 0 0 chrX 13678372 13678417 -8744410 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 689 208 143 20 39 chrX 13679825 13679876 -8742951 + A-rich Low_complexity Low_complexity 1 50 0 1 689 26 0 0 0 chrX 13680134 13680160 -8742667 + AT_rich Low_complexity Low_complexity 1 26 0 1 689 202 143 24 0 chrX 13680366 13680408 -8742419 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 689 198 0 0 0 chrX 13681868 13681890 -8740937 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 689 184 93 70 0 chrX 13683392 13683435 -8739392 + (TATG)n Simple_repeat Simple_repeat 4 49 0 1 689 246 160 0 0 chrX 13686920 13686970 -8735857 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 689 21 71 0 0 chrX 13688109 13688151 -8734676 + AT_rich Low_complexity Low_complexity 1 42 0 1 689 198 0 0 0 chrX 13688199 13688221 -8734606 + (T)n Simple_repeat Simple_repeat 1 22 0 1 689 44 0 0 0 chrX 13691763 13691807 -8731020 + AT_rich Low_complexity Low_complexity 1 44 0 1 689 192 77 0 0 chrX 13695383 13695409 -8727418 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 689 21 36 0 0 chrX 13695606 13695634 -8727193 + AT_rich Low_complexity Low_complexity 1 28 0 1 689 200 118 29 0 chrX 13699255 13699289 -8723538 + (TATG)n Simple_repeat Simple_repeat 1 35 0 1 689 231 233 0 16 chrX 13699333 13699394 -8723433 + T-rich Low_complexity Low_complexity 4 63 0 1 689 255 31 0 0 chrX 13699771 13699803 -8723024 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 689 228 111 0 0 chrX 13700950 13700986 -8721841 + (TACTG)n Simple_repeat Simple_repeat 5 40 0 1 689 195 188 0 0 chrX 13702462 13702510 -8720317 + (CAA)n Simple_repeat Simple_repeat 3 50 0 1 689 234 174 0 0 chrX 13702646 13702692 -8720135 + CT-rich Low_complexity Low_complexity 1 46 0 1 689 183 139 0 0 chrX 13705431 13705467 -8717360 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 689 198 118 0 0 chrX 13707076 13707110 -8715717 + (T)n Simple_repeat Simple_repeat 1 34 0 1 689 31 0 0 0 chrX 13707116 13707147 -8715680 + AT_rich Low_complexity Low_complexity 1 31 0 1 689 28 29 0 0 chrX 13707257 13707292 -8715535 + AT_rich Low_complexity Low_complexity 1 35 0 1 689 230 238 25 12 chrX 13707569 13707650 -8715177 + (TA)n Simple_repeat Simple_repeat 1 82 0 1 689 291 28 0 0 chrX 13709242 13709278 -8713549 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1 689 207 0 0 0 chrX 13709350 13709373 -8713454 + (T)n Simple_repeat Simple_repeat 1 23 0 1 689 201 259 0 24 chrX 13711237 13711320 -8711507 + (CATATA)n Simple_repeat Simple_repeat 5 85 0 1 689 21 0 0 0 chrX 13711963 13711984 -8710843 + AT_rich Low_complexity Low_complexity 1 21 0 1 689 195 42 0 0 chrX 13712177 13712201 -8710626 + (TATG)n Simple_repeat Simple_repeat 4 27 0 1 689 22 35 0 0 chrX 13715309 13715338 -8707489 + AT_rich Low_complexity Low_complexity 1 29 0 1 689 303 93 0 0 chrX 13715531 13715574 -8707253 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 689 259 217 14 14 chrX 13715730 13715800 -8707027 + GA-rich Low_complexity Low_complexity 3 72 0 1 689 220 220 0 17 chrX 13716177 13716237 -8706590 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 689 407 78 31 0 chrX 13716562 13716626 -8706201 - DNAREP1_DM LINE Penelope -460 134 69 1 689 23 86 0 0 chrX 13716698 13716756 -8706071 + AT_rich Low_complexity Low_complexity 1 58 0 1 689 24 32 0 0 chrX 13721959 13721990 -8700837 + AT_rich Low_complexity Low_complexity 1 31 0 1 689 206 209 0 0 chrX 13723790 13723833 -8698994 + (CTG)n Simple_repeat Simple_repeat 1 43 0 1 689 202 213 0 0 chrX 13723909 13723956 -8698871 + (CCA)n Simple_repeat Simple_repeat 2 48 0 1 689 21 36 0 0 chrX 13724480 13724508 -8698319 + AT_rich Low_complexity Low_complexity 1 28 0 1 689 37 52 0 0 chrX 13724704 13724762 -8698065 + AT_rich Low_complexity Low_complexity 1 58 0 1 689 29 0 0 0 chrX 13730132 13730161 -8692666 + AT_rich Low_complexity Low_complexity 1 29 0 1 689 183 129 0 0 chrX 13730442 13730473 -8692354 + (TGG)n Simple_repeat Simple_repeat 1 31 0 1 689 21 0 0 0 chrX 13730861 13730882 -8691945 + AT_rich Low_complexity Low_complexity 1 21 0 1 689 29 0 0 0 chrX 13732249 13732278 -8690549 + AT_rich Low_complexity Low_complexity 1 29 0 1 689 25 51 0 0 chrX 13732501 13732540 -8690287 + AT_rich Low_complexity Low_complexity 1 39 0 1 689 219 226 0 19 chrX 13733302 13733356 -8689471 + GA-rich Low_complexity Low_complexity 2 54 0 1 689 1549 202 6 8 chrX 13734575 13734940 -8687887 - SAR_DM Satellite Satellite -545 927 564 1 689 471 235 23 29 chrX 13734788 13734959 -8687868 + XDMR Unknown Unknown 1 170 -191 1 689 257 172 0 15 chrX 13735674 13735739 -8687088 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 689 195 184 0 0 chrX 13736845 13736883 -8685944 + (TATATG)n Simple_repeat Simple_repeat 3 40 0 1 689 287 104 21 0 chrX 13738209 13738257 -8684570 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 689 186 208 0 0 chrX 13738344 13738397 -8684430 + (CAT)n Simple_repeat Simple_repeat 1 53 0 1 689 432 91 0 0 chrX 13738505 13738571 -8684256 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 689 230 91 0 64 chrX 13738676 13738723 -8684104 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 689 21 57 0 0 chrX 13740122 13740157 -8682670 + AT_rich Low_complexity Low_complexity 1 35 0 1 689 180 0 0 0 chrX 13740199 13740219 -8682608 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1 689 204 135 0 26 chrX 13740361 13740399 -8682428 + T-rich Low_complexity Low_complexity 3 39 0 1 689 207 0 0 0 chrX 13740529 13740552 -8682275 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 689 198 67 43 22 chrX 13740888 13740934 -8681893 + (TTTTTG)n Simple_repeat Simple_repeat 6 52 0 1 689 21 36 0 0 chrX 13741222 13741250 -8681577 + AT_rich Low_complexity Low_complexity 1 28 0 1 689 276 263 16 25 chrX 13741254 13741375 -8681452 + T-rich Low_complexity Low_complexity 3 122 0 1 689 225 226 10 41 chrX 13742683 13742780 -8680047 + T-rich Low_complexity Low_complexity 4 97 0 1 689 28 0 0 0 chrX 13742807 13742835 -8679992 + AT_rich Low_complexity Low_complexity 1 28 0 1 689 198 118 0 0 chrX 13743200 13743234 -8679593 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 1 689 215 231 0 44 chrX 13743386 13743454 -8679373 + T-rich Low_complexity Low_complexity 1 65 0 1 689 257 256 41 8 chrX 13744198 13744320 -8678507 + (TA)n Simple_repeat Simple_repeat 2 127 0 1 689 291 54 0 0 chrX 13745247 13745284 -8677543 + (TTG)n Simple_repeat Simple_repeat 3 39 0 1 689 225 0 0 0 chrX 13745628 13745653 -8677174 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1 689 200 212 15 0 chrX 13746122 13746188 -8676639 + (TCTCTG)n Simple_repeat Simple_repeat 4 70 0 1 689 300 91 0 0 chrX 13747104 13747148 -8675679 + (CTTTG)n Simple_repeat Simple_repeat 1 44 0 1 689 189 74 0 0 chrX 13747927 13747954 -8674873 + (A)n Simple_repeat Simple_repeat 1 27 0 1 689 267 140 0 0 chrX 13749062 13749112 -8673715 + (TGG)n Simple_repeat Simple_repeat 1 50 0 1 689 214 175 0 0 chrX 13750207 13750247 -8672580 + (CCCGAA)n Simple_repeat Simple_repeat 1 40 0 1 689 201 314 0 0 chrX 13750907 13750977 -8671850 + (ATCG)n Simple_repeat Simple_repeat 2 71 0 1 689 22 0 0 0 chrX 13751777 13751799 -8671028 + AT_rich Low_complexity Low_complexity 1 22 0 1 689 277 336 0 0 chrX 13752066 13752197 -8670630 + T-rich Low_complexity Low_complexity 1 131 0 1 689 215 61 0 29 chrX 13753012 13753046 -8669781 + (CGAAT)n Simple_repeat Simple_repeat 2 34 0 1 689 219 185 0 36 chrX 13753313 13753369 -8669458 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 689 22 0 0 0 chrX 13753483 13753505 -8669322 + AT_rich Low_complexity Low_complexity 1 22 0 1 689 26 0 0 0 chrX 13753853 13753879 -8668948 + AT_rich Low_complexity Low_complexity 1 26 0 1 689 216 0 0 0 chrX 13754816 13754840 -8667987 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 1 689 182 62 31 0 chrX 13754896 13754928 -8667899 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 689 281 245 10 31 chrX 13755066 13755163 -8667664 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 1 689 25 90 0 0 chrX 13755287 13755354 -8667473 + AT_rich Low_complexity Low_complexity 1 67 0 1 689 183 130 56 0 chrX 13755364 13755418 -8667409 + T-rich Low_complexity Low_complexity 4 60 0 1 689 260 53 26 0 chrX 13755672 13755710 -8667117 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 689 225 167 0 0 chrX 13756399 13756441 -8666386 + (TTG)n Simple_repeat Simple_repeat 1 42 0 1 689 351 0 0 0 chrX 13756994 13757033 -8665794 + (CAAT)n Simple_repeat Simple_repeat 4 42 0 1 689 210 37 0 0 chrX 13757243 13757270 -8665557 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 689 221 143 14 87 chrX 13758236 13758305 -8664522 + T-rich Low_complexity Low_complexity 6 69 0 1 689 221 140 18 0 chrX 13758594 13758651 -8664176 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 689 26 0 0 0 chrX 13759456 13759482 -8663345 + AT_rich Low_complexity Low_complexity 1 26 0 1 689 206 250 0 0 chrX 13760110 13760162 -8662665 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 689 229 242 10 119 chrX 13760985 13761187 -8661640 + T-rich Low_complexity Low_complexity 1 180 0 1 689 21 0 0 0 chrX 13761803 13761824 -8661003 + AT_rich Low_complexity Low_complexity 1 21 0 1 689 200 247 71 0 chrX 13761979 13762064 -8660763 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 1 690 22 80 0 0 chrX 13762668 13762718 -8660109 + AT_rich Low_complexity Low_complexity 1 50 0 1 690 230 0 0 32 chrX 13762773 13762804 -8660023 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 690 218 191 29 14 chrX 13763045 13763114 -8659713 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 690 400 147 9 35 chrX 13763419 13763532 -8659295 + (TTG)n Simple_repeat Simple_repeat 2 111 0 1 690 211 154 26 0 chrX 13763532 13763571 -8659256 + (TAA)n Simple_repeat Simple_repeat 3 42 0 1 690 315 250 12 12 chrX 13764627 13764708 -8658119 + (CCG)n Simple_repeat Simple_repeat 1 81 0 1 690 194 155 0 33 chrX 13765168 13765228 -8657599 + (CTG)n Simple_repeat Simple_repeat 1 58 0 1 690 275 256 33 8 chrX 13765344 13765466 -8657361 + T-rich Low_complexity Low_complexity 5 129 0 1 690 357 75 0 0 chrX 13765611 13765664 -8657163 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 690 213 224 0 50 chrX 13766376 13766456 -8656371 + T-rich Low_complexity Low_complexity 6 81 0 1 690 180 0 0 0 chrX 13766472 13766492 -8656335 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1 690 280 274 0 0 chrX 13767304 13767388 -8655439 + T-rich Low_complexity Low_complexity 1 84 0 1 690 234 81 0 0 chrX 13768153 13768190 -8654637 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 690 186 143 0 0 chrX 13768990 13769025 -8653802 + (T)n Simple_repeat Simple_repeat 1 35 0 1 690 324 242 0 0 chrX 13769343 13769442 -8653385 + GA-rich Low_complexity Low_complexity 2 100 0 1 690 195 186 0 0 chrX 13770952 13770995 -8651832 + (CAT)n Simple_repeat Simple_repeat 3 45 0 1 690 213 94 0 0 chrX 13771307 13771339 -8651488 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 690 22 35 0 0 chrX 13771381 13771410 -8651417 + AT_rich Low_complexity Low_complexity 1 29 0 1 690 195 100 0 0 chrX 13771651 13771681 -8651146 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 690 180 0 0 0 chrX 13771838 13771858 -8650969 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 690 221 163 0 0 chrX 13772676 13772719 -8650108 + T-rich Low_complexity Low_complexity 6 48 0 1 690 23 0 0 0 chrX 13772873 13772896 -8649931 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 31 26 0 0 chrX 13773139 13773177 -8649650 + AT_rich Low_complexity Low_complexity 1 38 0 1 690 209 108 27 0 chrX 13773667 13773704 -8649123 + (TTTTTG)n Simple_repeat Simple_repeat 5 42 0 1 690 249 83 0 0 chrX 13774347 13774383 -8648444 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 690 29 0 0 0 chrX 13774738 13774767 -8648060 + AT_rich Low_complexity Low_complexity 1 29 0 1 690 23 0 0 0 chrX 13776009 13776032 -8646795 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 240 161 0 0 chrX 13776463 13776525 -8646302 + GA-rich Low_complexity Low_complexity 2 63 0 1 690 269 140 18 0 chrX 13776726 13776783 -8646044 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 690 192 96 18 55 chrX 13776832 13776887 -8645940 + T-rich Low_complexity Low_complexity 1 53 0 1 690 21 0 0 0 chrX 13776888 13776909 -8645918 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 28 29 0 0 chrX 13777066 13777101 -8645726 + AT_rich Low_complexity Low_complexity 1 35 0 1 690 183 129 0 0 chrX 13777708 13777739 -8645088 + (CCG)n Simple_repeat Simple_repeat 1 31 0 1 690 212 301 9 9 chrX 13777972 13778086 -8644741 + (TGG)n Simple_repeat Simple_repeat 1 114 0 1 690 324 232 0 29 chrX 13778320 13778422 -8644405 - ROO_I LTR Pao -7514 742 644 1 690 214 122 49 0 chrX 13778425 13778466 -8644361 + (CTG)n Simple_repeat Simple_repeat 3 45 0 1 690 246 247 0 30 chrX 13778518 13778618 -8644209 + CT-rich Low_complexity Low_complexity 3 99 0 1 690 216 86 0 0 chrX 13778829 13778864 -8643963 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 690 395 358 0 0 chrX 13778901 13779131 -8643696 + (CCG)n Simple_repeat Simple_repeat 1 230 0 1 690 265 200 0 0 chrX 13780058 13780123 -8642704 + ROO_I LTR Pao 679 743 -7513 1 690 250 148 31 62 chrX 13780083 13780148 -8642679 + Gypsy11_I LTR Gypsy 520 582 -2942 1 690 213 39 0 0 chrX 13780218 13780244 -8642583 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 690 22 0 0 0 chrX 13780653 13780675 -8642152 + GC_rich Low_complexity Low_complexity 1 22 0 1 690 264 100 0 0 chrX 13781156 13781196 -8641631 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 690 180 0 0 0 chrX 13781946 13781966 -8640861 + (TTTTTG)n Simple_repeat Simple_repeat 5 24 0 1 690 22 0 0 0 chrX 13783376 13783398 -8639429 + AT_rich Low_complexity Low_complexity 1 22 0 1 690 22 0 0 0 chrX 13783931 13783953 -8638874 + AT_rich Low_complexity Low_complexity 1 22 0 1 690 207 143 48 0 chrX 13784679 13784721 -8638106 + (CGAAA)n Simple_repeat Simple_repeat 1 44 0 1 690 204 158 0 0 chrX 13784843 13784881 -8637946 + (CATA)n Simple_repeat Simple_repeat 1 38 0 1 690 25 31 0 0 chrX 13785126 13785158 -8637669 + AT_rich Low_complexity Low_complexity 1 32 0 1 690 219 167 0 0 chrX 13785305 13785347 -8637480 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 690 228 35 0 0 chrX 13786715 13786744 -8636083 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 690 24 0 0 0 chrX 13787000 13787024 -8635803 + AT_rich Low_complexity Low_complexity 1 24 0 1 690 278 230 11 22 chrX 13787526 13787615 -8635212 - ROO_I LTR Pao -7529 727 640 1 690 210 156 0 0 chrX 13787684 13787729 -8635098 + CT-rich Low_complexity Low_complexity 2 46 0 1 690 225 191 21 0 chrX 13787961 13788008 -8634819 + GA-rich Low_complexity Low_complexity 3 50 0 1 690 30 0 0 0 chrX 13788128 13788158 -8634669 + AT_rich Low_complexity Low_complexity 1 30 0 1 690 351 141 0 0 chrX 13789153 13789217 -8633610 + (CAG)n Simple_repeat Simple_repeat 2 65 0 1 690 223 178 0 0 chrX 13790220 13790265 -8632562 + A-rich Low_complexity Low_complexity 1 45 0 1 690 28 71 0 0 chrX 13790723 13790779 -8632048 + AT_rich Low_complexity Low_complexity 1 56 0 1 690 241 188 21 86 chrX 13791131 13791224 -8631603 - ROO_I LTR Pao -7517 739 653 1 690 180 0 0 0 chrX 13791426 13791446 -8631381 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 690 30 45 0 0 chrX 13792171 13792215 -8630612 + AT_rich Low_complexity Low_complexity 1 44 0 1 690 212 100 25 0 chrX 13792428 13792468 -8630359 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 690 25 0 0 0 chrX 13793436 13793461 -8629366 + AT_rich Low_complexity Low_complexity 1 25 0 1 690 242 169 44 44 chrX 13793945 13794013 -8628814 - DOC3_DM LINE Jockey -4157 583 516 1 690 375 171 0 0 chrX 13793957 13794045 -8628782 - ROO_I LTR Pao -7518 738 651 1 690 509 275 26 35 chrX 13794623 13794849 -8627978 - XDMR Unknown Unknown -137 224 1 1 690 1655 260 29 21 chrX 13794671 13795323 -8627504 + SAR_DM Satellite Satellite 180 836 -636 1 690 739 217 23 39 chrX 13795169 13795428 -8627399 - XDMR_DM Unknown Unknown 0 360 106 1 690 288 120 0 0 chrX 13795684 13795734 -8627093 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 690 26 30 0 0 chrX 13796021 13796054 -8626773 + AT_rich Low_complexity Low_complexity 1 33 0 1 690 214 270 0 0 chrX 13796731 13796794 -8626033 + A-rich Low_complexity Low_complexity 1 63 0 1 690 249 98 0 0 chrX 13797089 13797130 -8625697 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 690 222 128 0 0 chrX 13797304 13797343 -8625484 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 690 213 65 0 0 chrX 13797571 13797602 -8625225 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 690 203 152 0 0 chrX 13797681 13797714 -8625113 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 690 206 160 20 0 chrX 13797795 13797845 -8624982 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 690 234 150 0 0 chrX 13797905 13797945 -8624882 + (CTG)n Simple_repeat Simple_repeat 2 41 0 1 690 420 135 0 0 chrX 13798571 13798645 -8624182 + (CTG)n Simple_repeat Simple_repeat 1 74 0 1 690 24 0 0 0 chrX 13799180 13799204 -8623623 + AT_rich Low_complexity Low_complexity 1 24 0 1 690 32 0 0 0 chrX 13799353 13799385 -8623442 + AT_rich Low_complexity Low_complexity 1 32 0 1 690 203 133 0 22 chrX 13799971 13800017 -8622810 + (CAGTT)n Simple_repeat Simple_repeat 1 45 0 1 690 231 36 0 0 chrX 13800827 13800855 -8621972 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 690 232 243 14 0 chrX 13801481 13801555 -8621272 - ROO_I LTR Pao -7530 726 652 1 690 250 204 34 11 chrX 13801645 13801734 -8621093 - ROO_I LTR Pao -7519 737 647 1 690 221 167 0 18 chrX 13802402 13802457 -8620370 + (CTG)n Simple_repeat Simple_repeat 3 56 0 1 690 282 95 0 0 chrX 13802868 13802910 -8619917 + (CAG)n Simple_repeat Simple_repeat 3 44 0 1 690 225 94 0 0 chrX 13803140 13803172 -8619655 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 690 195 42 0 0 chrX 13803660 13803684 -8619143 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 690 266 283 9 0 chrX 13804173 13804279 -8618548 - ROO_I LTR Pao -7518 738 632 1 690 22 0 0 0 chrX 13804449 13804471 -8618356 + AT_rich Low_complexity Low_complexity 1 22 0 1 690 23 0 0 0 chrX 13804523 13804546 -8618281 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 243 0 0 0 chrX 13805776 13805803 -8617024 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 690 186 43 0 0 chrX 13806611 13806634 -8616193 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 690 214 119 45 45 chrX 13806788 13806832 -8615995 + (GCTTG)n Simple_repeat Simple_repeat 2 45 0 1 690 21 0 0 0 chrX 13807889 13807910 -8614917 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 26 0 0 0 chrX 13808538 13808564 -8614263 + AT_rich Low_complexity Low_complexity 1 26 0 1 690 219 114 0 0 chrX 13808782 13808817 -8614010 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 690 353 212 0 0 chrX 13808998 13809078 -8613749 - ROO_I LTR Pao -7531 725 646 1 690 186 103 0 0 chrX 13809097 13809126 -8613701 + (CAG)n Simple_repeat Simple_repeat 3 31 0 1 690 40 21 0 0 chrX 13809554 13809601 -8613226 + AT_rich Low_complexity Low_complexity 1 47 0 1 690 210 143 0 0 chrX 13809932 13809967 -8612860 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 690 335 23 23 0 chrX 13810238 13810282 -8612545 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 690 24 32 0 0 chrX 13810413 13810444 -8612383 + AT_rich Low_complexity Low_complexity 1 31 0 1 690 339 78 0 0 chrX 13810768 13810819 -8612008 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 690 255 61 0 0 chrX 13811429 13811462 -8611365 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 690 240 143 0 0 chrX 13815126 13815168 -8607659 + (CAG)n Simple_repeat Simple_repeat 3 44 0 1 690 344 188 0 0 chrX 13815267 13815352 -8607475 + ROO_I LTR Pao 648 732 -7524 1 690 183 156 0 0 chrX 13815521 13815553 -8607274 + (CAG)n Simple_repeat Simple_repeat 2 33 0 1 690 292 233 25 17 chrX 13815580 13815698 -8607129 + ROO_I LTR Pao 615 733 -7523 1 690 23 33 0 0 chrX 13816214 13816244 -8606583 + AT_rich Low_complexity Low_complexity 1 30 0 1 690 248 208 0 0 chrX 13816546 13816594 -8606233 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1 690 242 232 0 0 chrX 13816631 13816687 -8606140 + A-rich Low_complexity Low_complexity 1 56 0 1 690 186 43 0 0 chrX 13817154 13817177 -8605650 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 690 189 107 0 0 chrX 13817679 13817707 -8605120 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 690 192 152 0 0 chrX 13817853 13817886 -8604941 + (CTG)n Simple_repeat Simple_repeat 2 34 0 1 690 289 156 0 38 chrX 13818437 13818517 -8604310 + ROO_I LTR Pao 644 720 -7536 1 690 242 261 14 14 chrX 13818585 13818655 -8604172 + (CAA)n Simple_repeat Simple_repeat 2 71 0 1 690 26 0 0 0 chrX 13819280 13819306 -8603521 + AT_rich Low_complexity Low_complexity 1 26 0 1 690 267 157 0 0 chrX 13819837 13819888 -8602939 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 690 23 33 0 0 chrX 13820850 13820880 -8601947 + AT_rich Low_complexity Low_complexity 1 30 0 1 690 30 0 0 0 chrX 13820920 13820950 -8601877 + AT_rich Low_complexity Low_complexity 1 30 0 1 690 276 91 0 0 chrX 13821279 13821323 -8601504 + (CATA)n Simple_repeat Simple_repeat 3 46 0 1 690 210 37 0 0 chrX 13821712 13821739 -8601088 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 690 185 35 0 65 chrX 13821850 13821881 -8600946 + (TATG)n Simple_repeat Simple_repeat 1 29 0 1 690 194 62 0 30 chrX 13821915 13821948 -8600879 + (GAATG)n Simple_repeat Simple_repeat 1 32 0 1 690 23 33 0 0 chrX 13822295 13822325 -8600502 + AT_rich Low_complexity Low_complexity 1 30 0 1 690 21 0 0 0 chrX 13823039 13823060 -8599767 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 32 43 0 0 chrX 13824667 13824713 -8598114 + AT_rich Low_complexity Low_complexity 1 46 0 1 690 201 132 0 0 chrX 13824874 13824912 -8597915 + (A)n Simple_repeat Simple_repeat 1 38 0 1 690 183 80 0 0 chrX 13825104 13825129 -8597698 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 690 186 43 0 0 chrX 13825726 13825749 -8597078 + (A)n Simple_repeat Simple_repeat 1 23 0 1 690 369 93 0 0 chrX 13826422 13826476 -8596351 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 690 212 59 29 0 chrX 13826633 13826667 -8596160 + (TTC)n Simple_repeat Simple_repeat 2 36 0 1 690 200 54 0 75 chrX 13826923 13826963 -8595864 + (CGACG)n Simple_repeat Simple_repeat 2 38 0 1 690 327 155 20 49 chrX 13827193 13827295 -8595532 - ROO_I LTR Pao -7513 743 645 1 690 279 122 0 0 chrX 13827417 13827466 -8595361 + (A)n Simple_repeat Simple_repeat 1 49 0 1 690 21 0 0 0 chrX 13827660 13827681 -8595146 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 32 26 0 0 chrX 13827817 13827856 -8594971 + AT_rich Low_complexity Low_complexity 1 39 0 1 690 213 263 0 17 chrX 13828147 13828205 -8594622 + (CGG)n Simple_repeat Simple_repeat 3 59 0 1 690 21 36 0 0 chrX 13828303 13828331 -8594496 + AT_rich Low_complexity Low_complexity 1 28 0 1 690 33 25 0 0 chrX 13828389 13828429 -8594398 + AT_rich Low_complexity Low_complexity 1 40 0 1 690 192 231 0 0 chrX 13829031 13829083 -8593744 + T-rich Low_complexity Low_complexity 1 52 0 1 690 183 42 0 0 chrX 13829483 13829507 -8593320 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 690 201 178 0 0 chrX 13829581 13829626 -8593201 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1 690 237 180 0 0 chrX 13829898 13829948 -8592879 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 690 21 36 0 0 chrX 13830362 13830390 -8592437 + AT_rich Low_complexity Low_complexity 1 28 0 1 690 22 0 0 0 chrX 13831537 13831559 -8591268 + AT_rich Low_complexity Low_complexity 1 22 0 1 690 198 0 0 0 chrX 13832059 13832081 -8590746 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1 690 27720 1 0 0 chrX 13832081 13835277 -8587550 - I_DM LINE I -770 5461 2266 1 690 23 54 0 0 chrX 13835412 13835449 -8587378 + AT_rich Low_complexity Low_complexity 1 37 0 1 690 186 43 0 0 chrX 13835856 13835879 -8586948 + (A)n Simple_repeat Simple_repeat 1 23 0 1 690 22 0 0 0 chrX 13836326 13836348 -8586479 + AT_rich Low_complexity Low_complexity 1 22 0 1 690 205 191 0 0 chrX 13837561 13837603 -8585224 + (CAA)n Simple_repeat Simple_repeat 1 42 0 1 690 281 211 13 13 chrX 13837847 13837924 -8584903 + (CAA)n Simple_repeat Simple_repeat 3 79 0 1 690 28 48 0 0 chrX 13840203 13840245 -8582582 + AT_rich Low_complexity Low_complexity 1 42 0 1 690 241 257 0 13 chrX 13840775 13840850 -8581977 + (CAA)n Simple_repeat Simple_repeat 3 76 0 1 690 246 263 0 0 chrX 13842882 13842939 -8579888 + A-rich Low_complexity Low_complexity 1 57 0 1 690 290 321 0 0 chrX 13843069 13843153 -8579674 + (CGGA)n Simple_repeat Simple_repeat 4 87 0 1 690 23 0 0 0 chrX 13843942 13843965 -8578862 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 216 158 0 0 chrX 13844256 13844294 -8578533 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 690 23 33 0 0 chrX 13844763 13844793 -8578034 + AT_rich Low_complexity Low_complexity 1 30 0 1 690 183 42 0 0 chrX 13846689 13846713 -8576114 + (A)n Simple_repeat Simple_repeat 1 24 0 1 690 210 147 0 0 chrX 13847438 13847472 -8575355 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 690 30 27 0 0 chrX 13847548 13847585 -8575242 + AT_rich Low_complexity Low_complexity 1 37 0 1 690 281 247 45 0 chrX 13847709 13847798 -8575029 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 1 690 232 174 0 0 chrX 13847870 13847916 -8574911 + A-rich Low_complexity Low_complexity 1 46 0 1 690 213 213 0 0 chrX 13848323 13848370 -8574457 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 690 21 0 0 0 chrX 13851183 13851204 -8571623 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 32 0 0 0 chrX 13851405 13851437 -8571390 + AT_rich Low_complexity Low_complexity 1 32 0 1 690 23 54 0 0 chrX 13853060 13853097 -8569730 + AT_rich Low_complexity Low_complexity 1 37 0 1 690 24 0 0 0 chrX 13853177 13853201 -8569626 + AT_rich Low_complexity Low_complexity 1 24 0 1 690 273 128 0 0 chrX 13853681 13853728 -8569099 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 690 21 57 0 0 chrX 13854780 13854815 -8568012 + AT_rich Low_complexity Low_complexity 1 35 0 1 690 22 0 0 0 chrX 13856324 13856346 -8566481 + AT_rich Low_complexity Low_complexity 1 22 0 1 690 26 30 0 0 chrX 13856502 13856535 -8566292 + AT_rich Low_complexity Low_complexity 1 33 0 1 690 36 0 0 0 chrX 13856766 13856802 -8566025 + AT_rich Low_complexity Low_complexity 1 36 0 1 690 221 167 0 0 chrX 13856857 13856899 -8565928 + A-rich Low_complexity Low_complexity 1 42 0 1 690 183 204 0 0 chrX 13857102 13857156 -8565671 + T-rich Low_complexity Low_complexity 1 54 0 1 690 279 114 0 0 chrX 13858134 13858178 -8564649 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 690 23 0 0 0 chrX 13859093 13859116 -8563711 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 25 51 0 0 chrX 13859349 13859388 -8563439 + AT_rich Low_complexity Low_complexity 1 39 0 1 690 33 0 0 0 chrX 13859432 13859465 -8563362 + AT_rich Low_complexity Low_complexity 1 33 0 1 690 198 0 0 0 chrX 13860464 13860486 -8562341 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 690 203 176 0 0 chrX 13860869 13860903 -8561924 + CT-rich Low_complexity Low_complexity 3 36 0 1 690 25 31 0 0 chrX 13861265 13861297 -8561530 + AT_rich Low_complexity Low_complexity 1 32 0 1 690 248 130 0 61 chrX 13861408 13861490 -8561337 + (TTG)n Simple_repeat Simple_repeat 2 78 0 1 690 31 0 0 0 chrX 13861646 13861677 -8561150 + AT_rich Low_complexity Low_complexity 1 31 0 1 690 270 81 0 0 chrX 13861813 13861850 -8560977 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 690 180 77 0 0 chrX 13862184 13862210 -8560617 + (CAAAAA)n Simple_repeat Simple_repeat 1 26 0 1 690 243 0 0 0 chrX 13862402 13862429 -8560398 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 690 252 122 0 0 chrX 13862638 13862679 -8560148 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 690 320 138 15 0 chrX 13863657 13863722 -8559105 + (CAGA)n Simple_repeat Simple_repeat 2 67 0 1 690 25 31 0 0 chrX 13864179 13864211 -8558616 + AT_rich Low_complexity Low_complexity 1 32 0 1 690 295 210 0 16 chrX 13864972 13865035 -8557792 + DNAREP1_DM LINE Penelope 1 62 -532 1 690 23 0 0 0 chrX 13865353 13865376 -8557451 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 194 0 0 37 chrX 13865585 13865612 -8557215 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 1 690 24 53 0 0 chrX 13866582 13866620 -8556207 + AT_rich Low_complexity Low_complexity 1 38 0 1 690 21 0 0 0 chrX 13867446 13867467 -8555360 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 237 83 0 0 chrX 13867740 13867776 -8555051 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 690 21 0 0 0 chrX 13868235 13868256 -8554571 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 23 68 0 0 chrX 13869790 13869834 -8552993 + AT_rich Low_complexity Low_complexity 1 44 0 1 690 564 95 0 0 chrX 13870659 13870743 -8552084 + (TA)n Simple_repeat Simple_repeat 2 85 0 1 690 23 68 0 0 chrX 13871215 13871259 -8551568 + AT_rich Low_complexity Low_complexity 1 44 0 1 690 25 0 0 0 chrX 13873443 13873468 -8549359 + AT_rich Low_complexity Low_complexity 1 25 0 1 690 25 0 0 0 chrX 13873616 13873641 -8549186 + AT_rich Low_complexity Low_complexity 1 25 0 1 690 195 42 0 0 chrX 13874227 13874251 -8548576 + (A)n Simple_repeat Simple_repeat 1 24 0 1 690 204 125 0 0 chrX 13875403 13875435 -8547392 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 690 204 228 0 50 chrX 13875458 13875518 -8547309 + A-rich Low_complexity Low_complexity 3 59 0 1 690 221 169 0 17 chrX 13875614 13875674 -8547153 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 690 225 0 0 0 chrX 13875711 13875736 -8547091 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 690 223 250 0 0 chrX 13876178 13876230 -8546597 + T-rich Low_complexity Low_complexity 4 55 0 1 690 404 139 13 0 chrX 13876275 13876354 -8546473 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 690 313 292 0 0 chrX 13877204 13877324 -8545503 + A-rich Low_complexity Low_complexity 1 120 0 1 690 186 118 0 0 chrX 13877418 13877452 -8545375 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 690 207 261 0 0 chrX 13877697 13877766 -8545061 + A-rich Low_complexity Low_complexity 1 69 0 1 690 201 282 9 26 chrX 13878346 13878459 -8544368 + (TTTA)n Simple_repeat Simple_repeat 3 113 0 1 690 288 0 0 0 chrX 13878595 13878627 -8544200 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 690 33 43 0 0 chrX 13878784 13878831 -8543996 + AT_rich Low_complexity Low_complexity 1 47 0 1 690 350 187 0 24 chrX 13879277 13879403 -8543424 + (TTG)n Simple_repeat Simple_repeat 1 123 0 1 690 321 68 0 0 chrX 13879754 13879798 -8543029 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 690 369 181 0 0 chrX 13879844 13879938 -8542889 + (TTG)n Simple_repeat Simple_repeat 1 94 0 1 690 36 23 0 0 chrX 13880038 13880081 -8542746 + AT_rich Low_complexity Low_complexity 1 43 0 1 690 284 48 24 0 chrX 13880636 13880678 -8542149 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 690 24 32 0 0 chrX 13881217 13881248 -8541579 + AT_rich Low_complexity Low_complexity 1 31 0 1 690 227 0 0 83 chrX 13881735 13881771 -8541056 + (T)n Simple_repeat Simple_repeat 1 33 0 1 690 23 54 0 0 chrX 13882427 13882464 -8540363 + AT_rich Low_complexity Low_complexity 1 37 0 1 690 233 57 29 0 chrX 13882664 13882699 -8540128 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1 690 474 65 0 0 chrX 13882918 13882980 -8539847 + (CAG)n Simple_repeat Simple_repeat 1 62 0 1 690 26 0 0 0 chrX 13883498 13883524 -8539303 + AT_rich Low_complexity Low_complexity 1 26 0 1 690 23 0 0 0 chrX 13883665 13883688 -8539139 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 23 0 0 0 chrX 13884003 13884026 -8538801 + AT_rich Low_complexity Low_complexity 1 23 0 1 690 243 61 0 0 chrX 13884216 13884249 -8538578 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 690 243 279 16 0 chrX 13884551 13884612 -8538215 + (CGG)n Simple_repeat Simple_repeat 2 63 0 1 690 204 97 0 0 chrX 13884745 13884776 -8538051 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 690 193 75 24 24 chrX 13885214 13885255 -8537572 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 690 206 225 0 12 chrX 13885893 13885974 -8536853 + T-rich Low_complexity Low_complexity 4 83 0 1 690 183 100 0 0 chrX 13886286 13886316 -8536511 + (A)n Simple_repeat Simple_repeat 1 30 0 1 690 200 272 12 12 chrX 13886540 13886622 -8536205 + (CCCA)n Simple_repeat Simple_repeat 2 83 0 1 690 251 56 0 0 chrX 13886966 13887002 -8535825 - BS LINE Jockey -14 5112 5077 1 690 261 0 0 0 chrX 13887167 13887196 -8535631 + (CAA)n Simple_repeat Simple_repeat 3 31 0 1 690 24 53 0 0 chrX 13887929 13887967 -8534860 + AT_rich Low_complexity Low_complexity 1 38 0 1 690 207 184 0 0 chrX 13888915 13888953 -8533874 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 690 185 65 32 0 chrX 13889100 13889131 -8533696 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 690 21 0 0 0 chrX 13889634 13889655 -8533172 + AT_rich Low_complexity Low_complexity 1 21 0 1 690 189 132 0 0 chrX 13890681 13890719 -8532108 + (CAG)n Simple_repeat Simple_repeat 2 39 0 1 690 29 0 0 0 chrX 13892887 13892916 -8529911 + AT_rich Low_complexity Low_complexity 1 29 0 1 690 216 67 0 0 chrX 13893006 13893036 -8529791 + (A)n Simple_repeat Simple_repeat 1 30 0 1 690 43 35 0 0 chrX 13893471 13893528 -8529299 + AT_rich Low_complexity Low_complexity 1 57 0 1 691 40 67 0 0 chrX 13893766 13893841 -8528986 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 36 23 0 0 chrX 13894931 13894974 -8527853 + AT_rich Low_complexity Low_complexity 1 43 0 1 691 322 63 0 250 chrX 13895068 13895150 -8527677 + DNAREP1_DM LINE Penelope 2 62 -532 1 691 1901 9 0 0 chrX 13895150 13895374 -8527453 + DIVER_LTR LTR Pao 1 224 0 1 691 27865 3 1 0 chrX 13895395 13898592 -8524235 + DIVER_I LTR Pao 1 3200 -2443 1 691 20054 3 0 0 chrX 13898591 13900891 -8521936 + DIVER_I LTR Pao 3344 5643 0 1 691 1901 9 0 0 chrX 13900891 13901115 -8521712 + DIVER_LTR LTR Pao 1 224 0 1 691 1587 110 27 14 chrX 13901130 13901425 -8521402 + DNAREP1_DM LINE Penelope 50 348 -246 1 691 25 0 0 0 chrX 13901506 13901531 -8521296 + AT_rich Low_complexity Low_complexity 1 25 0 1 691 245 292 0 15 chrX 13901994 13902118 -8520709 + T-rich Low_complexity Low_complexity 1 122 0 1 691 252 0 0 0 chrX 13903467 13903495 -8519332 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 691 180 0 0 0 chrX 13904660 13904680 -8518147 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 691 25 31 0 0 chrX 13905110 13905142 -8517685 + AT_rich Low_complexity Low_complexity 1 32 0 1 691 300 53 0 0 chrX 13906187 13906225 -8516602 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 691 30 0 0 0 chrX 13907502 13907532 -8515295 + AT_rich Low_complexity Low_complexity 1 30 0 1 691 24 0 0 0 chrX 13908167 13908191 -8514636 + AT_rich Low_complexity Low_complexity 1 24 0 1 691 21 36 0 0 chrX 13909571 13909599 -8513228 + AT_rich Low_complexity Low_complexity 1 28 0 1 691 23 0 0 0 chrX 13910318 13910341 -8512486 + AT_rich Low_complexity Low_complexity 1 23 0 1 691 21 0 0 0 chrX 13910926 13910947 -8511880 + AT_rich Low_complexity Low_complexity 1 21 0 1 691 24 0 0 0 chrX 13911125 13911149 -8511678 + AT_rich Low_complexity Low_complexity 1 24 0 1 691 25 0 0 0 chrX 13912482 13912507 -8510320 + AT_rich Low_complexity Low_complexity 1 25 0 1 691 201 94 0 0 chrX 13913498 13913530 -8509297 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 691 200 275 0 0 chrX 13914490 13914559 -8508268 + T-rich Low_complexity Low_complexity 1 69 0 1 691 208 299 0 0 chrX 13914758 13914835 -8507992 + T-rich Low_complexity Low_complexity 1 77 0 1 691 231 88 0 0 chrX 13915171 13915205 -8507622 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 691 180 111 0 0 chrX 13915828 13915855 -8506972 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 691 288 120 0 0 chrX 13916710 13916760 -8506067 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 691 25 0 0 0 chrX 13917137 13917162 -8505665 + AT_rich Low_complexity Low_complexity 1 25 0 1 691 27 29 0 0 chrX 13918216 13918250 -8504577 + AT_rich Low_complexity Low_complexity 1 34 0 1 691 33 25 0 0 chrX 13918530 13918570 -8504257 + AT_rich Low_complexity Low_complexity 1 40 0 1 691 22 0 0 0 chrX 13919937 13919959 -8502868 + AT_rich Low_complexity Low_complexity 1 22 0 1 691 219 36 0 0 chrX 13921034 13921062 -8501765 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1 691 26 30 0 0 chrX 13922109 13922142 -8500685 + AT_rich Low_complexity Low_complexity 1 33 0 1 691 23 0 0 0 chrX 13922978 13923001 -8499826 + AT_rich Low_complexity Low_complexity 1 23 0 1 691 30 0 0 0 chrX 13923089 13923119 -8499708 + AT_rich Low_complexity Low_complexity 1 30 0 1 691 291 93 0 0 chrX 13923519 13923562 -8499265 + (CAA)n Simple_repeat Simple_repeat 2 44 0 1 691 254 183 0 0 chrX 13923626 13923686 -8499141 + ROO_I LTR Pao 648 707 -7549 1 691 216 67 0 0 chrX 13924063 13924093 -8498734 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 691 194 0 39 0 chrX 13924779 13924805 -8498022 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 1 691 2297 0 0 0 chrX 13924838 13925114 -8497713 + Copia_LTR LTR Copia 1 276 0 1 691 550 15 0 0 chrX 13925114 13925181 -8497646 + Copia_I LTR Copia 1 67 -4526 1 691 33432 1 1 0 chrX 13925148 13929091 -8493736 + Copia_I LTR Copia 650 4593 0 1 691 2297 0 0 0 chrX 13929091 13929367 -8493460 + Copia_LTR LTR Copia 1 276 0 1 691 263 130 0 18 chrX 13929579 13929634 -8493193 + (CATA)n Simple_repeat Simple_repeat 3 56 0 1 691 259 269 13 0 chrX 13930344 13930422 -8492405 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 691 206 62 0 30 chrX 13931759 13931792 -8491035 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 691 277 258 0 68 chrX 13932186 13932319 -8490508 + A-rich Low_complexity Low_complexity 1 124 0 1 691 198 176 0 0 chrX 13932350 13932401 -8490426 + GA-rich Low_complexity Low_complexity 1 51 0 1 691 696 294 69 19 chrX 13932797 13933443 -8489384 - SAR_DM Satellite Satellite -446 1026 219 1 691 203 231 0 0 chrX 13934220 13934259 -8488568 + (CGTCG)n Simple_repeat Simple_repeat 2 40 0 1 691 198 0 0 0 chrX 13934609 13934631 -8488196 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 691 25 0 0 0 chrX 13934816 13934841 -8487986 + AT_rich Low_complexity Low_complexity 1 25 0 1 691 183 139 0 0 chrX 13935201 13935237 -8487590 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 691 221 109 0 21 chrX 13936441 13936488 -8486339 + (CCCA)n Simple_repeat Simple_repeat 3 48 0 1 691 35 0 0 0 chrX 13937209 13937244 -8485583 + AT_rich Low_complexity Low_complexity 1 35 0 1 691 237 65 0 0 chrX 13937378 13937409 -8485418 + (T)n Simple_repeat Simple_repeat 1 31 0 1 691 246 128 0 0 chrX 13937741 13937780 -8485047 + (T)n Simple_repeat Simple_repeat 1 39 0 1 691 215 194 60 0 chrX 13938439 13938506 -8484321 + (CCCA)n Simple_repeat Simple_repeat 2 72 0 1 691 22 0 0 0 chrX 13939683 13939705 -8483122 + AT_rich Low_complexity Low_complexity 1 22 0 1 691 33 25 0 0 chrX 13940262 13940302 -8482525 + AT_rich Low_complexity Low_complexity 1 40 0 1 691 32 57 0 0 chrX 13940337 13940390 -8482437 + AT_rich Low_complexity Low_complexity 1 53 0 1 691 770 69 107 8 chrX 13940430 13940561 -8482266 - DNAREP1_DM LINE Penelope -450 144 1 1 691 34 42 0 0 chrX 13940664 13940712 -8482115 + AT_rich Low_complexity Low_complexity 1 48 0 1 691 38 22 0 0 chrX 13941902 13941947 -8480880 + AT_rich Low_complexity Low_complexity 1 45 0 1 691 40 67 0 0 chrX 13943141 13943216 -8479611 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 40 67 0 0 chrX 13944410 13944485 -8478342 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 40 67 0 0 chrX 13945679 13945754 -8477073 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 40 67 0 0 chrX 13946948 13947023 -8475804 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 40 67 0 0 chrX 13948218 13948293 -8474534 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 40 67 0 0 chrX 13949487 13949562 -8473265 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 40 67 0 0 chrX 13950756 13950831 -8471996 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 40 67 0 0 chrX 13952025 13952100 -8470727 + AT_rich Low_complexity Low_complexity 1 75 0 1 691 39 68 0 0 chrX 13953296 13953370 -8469457 + AT_rich Low_complexity Low_complexity 1 74 0 1 691 39 68 0 0 chrX 13954564 13954638 -8468189 + AT_rich Low_complexity Low_complexity 1 74 0 1 691 180 0 0 0 chrX 13957617 13957637 -8465190 + (CCCCAA)n Simple_repeat Simple_repeat 3 22 0 1 691 198 229 0 0 chrX 13959809 13959879 -8462948 + (CAA)n Simple_repeat Simple_repeat 3 72 0 1 691 23 54 0 0 chrX 13961244 13961281 -8461546 + AT_rich Low_complexity Low_complexity 1 37 0 1 691 246 242 0 0 chrX 13961412 13961474 -8461353 + T-rich Low_complexity Low_complexity 1 62 0 1 691 242 138 0 130 chrX 13962503 13962603 -8460224 + ROO_I LTR Pao 653 739 -7517 1 691 198 71 0 0 chrX 13962740 13962768 -8460059 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 691 32 57 0 0 chrX 13963076 13963129 -8459698 + AT_rich Low_complexity Low_complexity 1 53 0 1 691 262 212 0 0 chrX 13963257 13963323 -8459504 + T-rich Low_complexity Low_complexity 1 66 0 1 691 258 211 0 0 chrX 13963390 13963447 -8459380 + (TTG)n Simple_repeat Simple_repeat 1 57 0 1 691 362 132 0 24 chrX 13963587 13963672 -8459155 + ROO_I LTR Pao 652 734 -7522 1 691 240 122 0 0 chrX 13963838 13963879 -8458948 + (TATAG)n Simple_repeat Simple_repeat 3 43 0 1 691 22 103 0 0 chrX 13964581 13964659 -8458168 + AT_rich Low_complexity Low_complexity 1 78 0 1 691 228 170 21 0 chrX 13965227 13965274 -8457553 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 691 192 111 0 0 chrX 13965514 13965550 -8457277 + (A)n Simple_repeat Simple_repeat 1 36 0 1 691 212 128 43 0 chrX 13966311 13966358 -8456469 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 691 27 29 0 0 chrX 13966948 13966982 -8455845 + AT_rich Low_complexity Low_complexity 1 34 0 1 691 235 256 0 24 chrX 13967440 13967524 -8455303 + (CAA)n Simple_repeat Simple_repeat 1 82 0 1 691 198 71 0 0 chrX 13968087 13968115 -8454712 + (TTC)n Simple_repeat Simple_repeat 2 29 0 1 691 344 130 14 0 chrX 13968563 13968632 -8454195 + (CTG)n Simple_repeat Simple_repeat 3 72 0 1 691 27 29 0 0 chrX 13968907 13968941 -8453886 + AT_rich Low_complexity Low_complexity 1 34 0 1 691 234 0 0 0 chrX 13970270 13970296 -8452531 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 691 217 250 0 48 chrX 13970642 13970705 -8452122 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 1 691 27 0 0 0 chrX 13971814 13971841 -8450986 + AT_rich Low_complexity Low_complexity 1 27 0 1 691 225 0 0 0 chrX 13972521 13972546 -8450281 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 691 21 0 0 0 chrX 13972554 13972575 -8450252 + AT_rich Low_complexity Low_complexity 1 21 0 1 691 231 36 0 0 chrX 13972707 13972735 -8450092 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 691 189 0 0 0 chrX 13973365 13973386 -8449441 + (A)n Simple_repeat Simple_repeat 1 21 0 1 691 27 0 0 0 chrX 13974223 13974250 -8448577 + AT_rich Low_complexity Low_complexity 1 27 0 1 691 35 71 0 0 chrX 13976606 13976676 -8446151 + AT_rich Low_complexity Low_complexity 1 70 0 1 691 21 36 0 0 chrX 13976728 13976756 -8446071 + AT_rich Low_complexity Low_complexity 1 28 0 1 691 189 0 0 0 chrX 13977011 13977032 -8445795 + (GA)n Simple_repeat Simple_repeat 2 22 0 1 691 21 36 0 0 chrX 13977494 13977522 -8445305 + AT_rich Low_complexity Low_complexity 1 28 0 1 691 255 114 0 0 chrX 13978969 13979013 -8443814 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 691 234 0 0 0 chrX 13979966 13979992 -8442835 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 691 215 170 21 0 chrX 13981694 13981741 -8441086 + A-rich Low_complexity Low_complexity 2 49 0 1 691 348 24 0 0 chrX 13981914 13981955 -8440872 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 691 271 281 0 22 chrX 13985015 13985106 -8437721 + (TATG)n Simple_repeat Simple_repeat 3 91 0 1 691 192 135 0 0 chrX 13985455 13985492 -8437335 + (T)n Simple_repeat Simple_repeat 1 37 0 1 691 222 37 0 0 chrX 13986192 13986219 -8436608 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 691 192 158 0 0 chrX 13986795 13986833 -8435994 + T-rich Low_complexity Low_complexity 1 38 0 1 691 23 78 0 0 chrX 13987446 13987497 -8435330 + AT_rich Low_complexity Low_complexity 1 51 0 1 691 21 0 0 0 chrX 13989321 13989342 -8433485 + AT_rich Low_complexity Low_complexity 1 21 0 1 691 192 97 0 0 chrX 13989644 13989675 -8433152 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 691 219 36 0 0 chrX 13989873 13989901 -8432926 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 691 189 0 0 0 chrX 13990242 13990263 -8432564 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 691 261 57 0 0 chrX 13990784 13990819 -8432008 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 691 204 40 0 0 chrX 13991975 13992000 -8430827 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 691 189 0 0 0 chrX 13993624 13993645 -8429182 + (T)n Simple_repeat Simple_repeat 1 21 0 1 691 198 136 0 0 chrX 13994784 13994828 -8427999 + (TCTCC)n Simple_repeat Simple_repeat 5 48 0 1 691 25 31 0 0 chrX 13995206 13995238 -8427589 + AT_rich Low_complexity Low_complexity 1 32 0 1 691 212 171 0 24 chrX 13995994 13996036 -8426791 + (TGGG)n Simple_repeat Simple_repeat 3 43 0 1 691 252 0 0 0 chrX 13996298 13996326 -8426501 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 691 25 31 0 0 chrX 13998274 13998306 -8424521 + AT_rich Low_complexity Low_complexity 1 32 0 1 691 3969 2 0 2 chrX 13999110 13999539 -8423288 + ROO_LTR LTR Pao 1 428 0 1 691 4183 2 0 2 chrX 13999539 14000000 -8422827 + ROO_I LTR Pao 1 460 -7796 1 691 66160 1 3 0 chrX 14000000 14007774 -8415053 + ROO_I LTR Pao 461 8256 0 1 691 3712 2 0 2 chrX 14007774 14008203 -8414624 + ROO_LTR LTR Pao 1 428 0 1 691 32 43 0 0 chrX 14012611 14012657 -8410170 + AT_rich Low_complexity Low_complexity 1 46 0 1 691 186 43 0 0 chrX 14013547 14013570 -8409257 + (CAT)n Simple_repeat Simple_repeat 2 24 0 1 691 225 254 0 0 chrX 14014190 14014249 -8408578 + (TCTCTG)n Simple_repeat Simple_repeat 5 63 0 1 691 24 53 0 0 chrX 14017216 14017254 -8405573 + AT_rich Low_complexity Low_complexity 1 38 0 1 691 29 47 0 0 chrX 14017301 14017344 -8405483 + AT_rich Low_complexity Low_complexity 1 43 0 1 691 225 0 0 0 chrX 14017686 14017711 -8405116 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 691 883 103 0 7 chrX 14018560 14018697 -8404130 - DNAREP1_DM LINE Penelope -458 136 1 1 691 356 165 133 10 chrX 14018699 14018797 -8404030 + XDMR_DM Unknown Unknown 175 284 -76 1 691 445 254 6 23 chrX 14018773 14018946 -8403881 - SAR_DM Satellite Satellite -728 744 575 1 691 583 233 46 5 chrX 14018805 14018999 -8403828 + XDMR Unknown Unknown 1 202 -159 1 691 203 184 0 0 chrX 14019497 14019535 -8403292 + T-rich Low_complexity Low_complexity 1 38 0 1 691 26 0 0 0 chrX 14019963 14019989 -8402838 + AT_rich Low_complexity Low_complexity 1 26 0 1 691 189 159 0 0 chrX 14020303 14020347 -8402480 + A-rich Low_complexity Low_complexity 1 44 0 1 691 183 129 0 0 chrX 14020515 14020546 -8402281 + (TTG)n Simple_repeat Simple_repeat 1 31 0 1 691 246 148 0 0 chrX 14021258 14021312 -8401515 + (T)n Simple_repeat Simple_repeat 1 54 0 1 691 21 36 0 0 chrX 14021479 14021507 -8401320 + AT_rich Low_complexity Low_complexity 1 28 0 1 691 219 103 0 0 chrX 14022092 14022131 -8400696 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 691 34 57 0 43 chrX 14022615 14022707 -8400120 + AT_rich Low_complexity Low_complexity 1 88 0 1 691 210 162 0 0 chrX 14023041 14023078 -8399749 + A-rich Low_complexity Low_complexity 1 37 0 1 691 24 53 0 0 chrX 14023677 14023715 -8399112 + AT_rich Low_complexity Low_complexity 1 38 0 1 692 347 41 0 20 chrX 14029299 14029349 -8393478 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 692 200 255 0 0 chrX 14030025 14030076 -8392751 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 692 26 74 0 0 chrX 14030447 14030501 -8392326 + AT_rich Low_complexity Low_complexity 1 54 0 1 692 276 30 0 0 chrX 14033159 14033192 -8389635 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 692 24 106 0 0 chrX 14034020 14034114 -8388713 + AT_rich Low_complexity Low_complexity 1 94 0 1 692 28 0 0 0 chrX 14034508 14034536 -8388291 + AT_rich Low_complexity Low_complexity 1 28 0 1 692 206 133 0 0 chrX 14034875 14034905 -8387922 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 1 692 21 0 0 0 chrX 14035155 14035176 -8387651 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 23 101 0 0 chrX 14036899 14036978 -8385849 + AT_rich Low_complexity Low_complexity 1 79 0 1 692 216 67 0 0 chrX 14038142 14038172 -8384655 + (A)n Simple_repeat Simple_repeat 1 30 0 1 692 24 67 0 0 chrX 14038449 14038494 -8384333 + AT_rich Low_complexity Low_complexity 1 45 0 1 692 191 128 51 0 chrX 14038747 14038786 -8384041 + (CATA)n Simple_repeat Simple_repeat 1 41 0 1 692 201 147 0 0 chrX 14039673 14039707 -8383120 + (TTTTC)n Simple_repeat Simple_repeat 3 36 0 1 692 207 193 53 0 chrX 14040300 14040357 -8382470 + T-rich Low_complexity Low_complexity 4 63 0 1 692 210 258 0 16 chrX 14040872 14040935 -8381892 + CT-rich Low_complexity Low_complexity 1 62 0 1 692 210 37 0 0 chrX 14041821 14041848 -8380979 + (CTTTG)n Simple_repeat Simple_repeat 3 29 0 1 692 25 0 0 0 chrX 14042349 14042374 -8380453 + AT_rich Low_complexity Low_complexity 1 25 0 1 692 189 107 0 0 chrX 14042510 14042538 -8380289 + (CAT)n Simple_repeat Simple_repeat 1 28 0 1 692 213 94 0 0 chrX 14042599 14042631 -8380196 + (CAG)n Simple_repeat Simple_repeat 2 33 0 1 692 23 0 0 0 chrX 14043115 14043138 -8379689 + AT_rich Low_complexity Low_complexity 1 23 0 1 692 34 24 0 0 chrX 14043913 14043954 -8378873 + AT_rich Low_complexity Low_complexity 1 41 0 1 692 189 0 0 0 chrX 14044229 14044250 -8378577 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 692 25 51 0 0 chrX 14044688 14044727 -8378100 + AT_rich Low_complexity Low_complexity 1 39 0 1 692 23 33 0 0 chrX 14044839 14044869 -8377958 + AT_rich Low_complexity Low_complexity 1 30 0 1 692 205 205 0 0 chrX 14045090 14045129 -8377698 + T-rich Low_complexity Low_complexity 1 39 0 1 692 205 138 0 0 chrX 14045307 14045336 -8377491 + (CAGC)n Simple_repeat Simple_repeat 4 32 0 1 692 65 56 0 0 chrX 14046400 14046507 -8376320 + AT_rich Low_complexity Low_complexity 1 107 0 1 692 198 0 0 0 chrX 14046853 14046875 -8375952 + (A)n Simple_repeat Simple_repeat 1 22 0 1 692 213 94 0 0 chrX 14048887 14048919 -8373908 + (T)n Simple_repeat Simple_repeat 1 32 0 1 692 33 0 0 0 chrX 14049330 14049363 -8373464 + AT_rich Low_complexity Low_complexity 1 33 0 1 692 183 129 0 0 chrX 14050012 14050043 -8372784 + (CAGCC)n Simple_repeat Simple_repeat 1 31 0 1 692 24 67 0 0 chrX 14050962 14051007 -8371820 + AT_rich Low_complexity Low_complexity 1 45 0 1 692 227 93 23 0 chrX 14051163 14051206 -8371621 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 692 198 0 0 0 chrX 14051508 14051530 -8371297 + (CAGT)n Simple_repeat Simple_repeat 4 25 0 1 692 3355 7 7 7 chrX 14051680 14052094 -8370733 - DM297_LTR LTR Gypsy 0 414 1 1 692 6292 9 0 0 chrX 14052094 14052888 -8369939 - DM297_I LTR Gypsy 0 6167 5374 1 692 33204 8 0 1 chrX 14052860 14056866 -8365961 - DM297_I LTR Gypsy -2165 4002 1 1 692 3591 7 7 7 chrX 14056866 14057280 -8365547 - DM297_LTR LTR Gypsy 0 414 1 1 692 30 69 0 0 chrX 14058214 14058272 -8364555 + AT_rich Low_complexity Low_complexity 1 58 0 1 692 24 0 0 0 chrX 14058935 14058959 -8363868 + AT_rich Low_complexity Low_complexity 1 24 0 1 692 23 0 0 0 chrX 14059520 14059543 -8363284 + AT_rich Low_complexity Low_complexity 1 23 0 1 692 33 0 0 0 chrX 14061313 14061346 -8361481 + AT_rich Low_complexity Low_complexity 1 33 0 1 692 24 32 0 0 chrX 14062247 14062278 -8360549 + AT_rich Low_complexity Low_complexity 1 31 0 1 692 38 56 0 33 chrX 14062321 14062413 -8360414 + AT_rich Low_complexity Low_complexity 1 89 0 1 692 183 80 0 0 chrX 14063865 14063890 -8358937 + (TCC)n Simple_repeat Simple_repeat 2 26 0 1 692 22 56 0 0 chrX 14065507 14065543 -8357284 + AT_rich Low_complexity Low_complexity 1 36 0 1 692 31 26 0 0 chrX 14066595 14066633 -8356194 + AT_rich Low_complexity Low_complexity 1 38 0 1 692 21 0 0 0 chrX 14067060 14067081 -8355746 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 202 182 0 0 chrX 14067930 14067963 -8354864 + C-rich Low_complexity Low_complexity 1 33 0 1 692 27 0 0 0 chrX 14069752 14069779 -8353048 + AT_rich Low_complexity Low_complexity 1 27 0 1 692 21 0 0 0 chrX 14070538 14070559 -8352268 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 206 236 0 0 chrX 14072052 14072107 -8350720 + T-rich Low_complexity Low_complexity 1 55 0 1 692 25 0 0 0 chrX 14072743 14072768 -8350059 + AT_rich Low_complexity Low_complexity 1 25 0 1 692 21 71 0 0 chrX 14073306 14073348 -8349479 + AT_rich Low_complexity Low_complexity 1 42 0 1 692 206 213 0 0 chrX 14073803 14073850 -8348977 + GA-rich Low_complexity Low_complexity 3 49 0 1 692 22 80 0 0 chrX 14074265 14074315 -8348512 + AT_rich Low_complexity Low_complexity 1 50 0 1 692 183 80 0 0 chrX 14075473 14075498 -8347329 + (CCCCAG)n Simple_repeat Simple_repeat 6 30 0 1 692 21 0 0 0 chrX 14077750 14077771 -8345056 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 23 78 0 0 chrX 14080043 14080094 -8342733 + AT_rich Low_complexity Low_complexity 1 51 0 1 692 261 57 0 0 chrX 14080901 14080936 -8341891 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 692 218 279 0 0 chrX 14083366 14083434 -8339393 + T-rich Low_complexity Low_complexity 1 68 0 1 692 189 0 0 0 chrX 14083612 14083633 -8339194 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 692 21 0 0 0 chrX 14093851 14093872 -8328955 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 28 0 0 0 chrX 14094934 14094962 -8327865 + AT_rich Low_complexity Low_complexity 1 28 0 1 692 209 330 0 9 chrX 14095945 14096055 -8326772 + (CAGAGA)n Simple_repeat Simple_repeat 6 114 0 1 692 203 109 0 61 chrX 14098208 14098257 -8324570 + T-rich Low_complexity Low_complexity 3 48 0 1 692 34 42 0 0 chrX 14098552 14098600 -8324227 + AT_rich Low_complexity Low_complexity 1 48 0 1 692 258 81 0 0 chrX 14098683 14098720 -8324107 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 692 180 0 0 0 chrX 14098796 14098816 -8324011 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 692 225 94 0 0 chrX 14098933 14098965 -8323862 + (CATA)n Simple_repeat Simple_repeat 1 32 0 1 692 207 0 0 0 chrX 14099090 14099113 -8323714 + (A)n Simple_repeat Simple_repeat 1 23 0 1 692 201 147 0 0 chrX 14101275 14101309 -8321518 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 692 28 0 0 0 chrX 14101912 14101940 -8320887 + AT_rich Low_complexity Low_complexity 1 28 0 1 692 203 229 0 20 chrX 14102029 14102078 -8320749 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 692 201 94 0 0 chrX 14103160 14103192 -8319635 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 692 208 200 0 35 chrX 14103232 14103289 -8319538 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 692 378 0 0 0 chrX 14103544 14103586 -8319241 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 692 30 0 0 0 chrX 14104036 14104066 -8318761 + AT_rich Low_complexity Low_complexity 1 30 0 1 692 26 30 0 0 chrX 14104146 14104179 -8318648 + AT_rich Low_complexity Low_complexity 1 33 0 1 692 225 207 17 0 chrX 14104699 14104757 -8318070 + (CTG)n Simple_repeat Simple_repeat 3 61 0 1 692 260 282 0 46 chrX 14105221 14105351 -8317476 + T-rich Low_complexity Low_complexity 2 125 0 1 692 189 121 0 0 chrX 14106323 14106356 -8316471 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 692 24 53 0 0 chrX 14106867 14106905 -8315922 + AT_rich Low_complexity Low_complexity 1 38 0 1 692 26 0 0 0 chrX 14110287 14110313 -8312514 + AT_rich Low_complexity Low_complexity 1 26 0 1 692 21 0 0 0 chrX 14112158 14112179 -8310648 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 231 188 42 0 chrX 14113443 14113491 -8309336 + (CATA)n Simple_repeat Simple_repeat 1 50 0 1 692 183 80 0 0 chrX 14114110 14114135 -8308692 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 692 25 65 0 0 chrX 14116444 14116490 -8306337 + AT_rich Low_complexity Low_complexity 1 46 0 1 692 32 0 0 0 chrX 14116591 14116623 -8306204 + AT_rich Low_complexity Low_complexity 1 32 0 1 692 192 77 0 0 chrX 14127778 14127804 -8295023 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 692 192 152 0 0 chrX 14127869 14127902 -8294925 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 692 34 24 0 0 chrX 14128193 14128234 -8294593 + AT_rich Low_complexity Low_complexity 1 41 0 1 692 303 28 0 0 chrX 14136656 14136692 -8286135 + (CTG)n Simple_repeat Simple_repeat 1 36 0 1 692 27 29 0 0 chrX 14136880 14136914 -8285913 + AT_rich Low_complexity Low_complexity 1 34 0 1 692 63 26 0 0 chrX 14137275 14137352 -8285475 + AT_rich Low_complexity Low_complexity 1 77 0 1 692 228 244 0 0 chrX 14137487 14137532 -8285295 + (CATA)n Simple_repeat Simple_repeat 3 47 0 1 692 21 36 0 0 chrX 14140524 14140552 -8282275 + AT_rich Low_complexity Low_complexity 1 28 0 1 692 29 47 0 0 chrX 14141390 14141433 -8281394 + AT_rich Low_complexity Low_complexity 1 43 0 1 692 255 125 0 0 chrX 14150176 14150216 -8272611 + (CAG)n Simple_repeat Simple_repeat 3 42 0 1 692 234 291 0 0 chrX 14152993 14153048 -8269779 + (ACCG)n Simple_repeat Simple_repeat 2 56 0 1 692 24 0 0 0 chrX 14154040 14154064 -8268763 + AT_rich Low_complexity Low_complexity 1 24 0 1 692 22 0 0 0 chrX 14154354 14154376 -8268451 + AT_rich Low_complexity Low_complexity 1 22 0 1 692 189 121 0 0 chrX 14154808 14154841 -8267986 + (TTGG)n Simple_repeat Simple_repeat 3 35 0 1 692 222 156 0 0 chrX 14155523 14155568 -8267259 + (GTTTG)n Simple_repeat Simple_repeat 5 49 0 1 693 21 36 0 0 chrX 14155975 14156003 -8266824 + AT_rich Low_complexity Low_complexity 1 28 0 1 693 195 69 0 0 chrX 14156587 14156616 -8266211 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 693 234 123 28 84 chrX 14156961 14157032 -8265795 + T-rich Low_complexity Low_complexity 2 68 0 1 693 255 93 0 0 chrX 14157131 14157174 -8265653 + (CGAAT)n Simple_repeat Simple_repeat 2 44 0 1 693 25 31 0 0 chrX 14157421 14157453 -8265374 + AT_rich Low_complexity Low_complexity 1 32 0 1 693 215 61 0 29 chrX 14158833 14158867 -8263960 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 693 221 75 25 0 chrX 14159009 14159049 -8263778 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 693 26 0 0 0 chrX 14159430 14159456 -8263371 + AT_rich Low_complexity Low_complexity 1 26 0 1 693 195 146 0 0 chrX 14160471 14160512 -8262315 + (A)n Simple_repeat Simple_repeat 1 41 0 1 693 21 36 0 0 chrX 14161245 14161273 -8261554 + AT_rich Low_complexity Low_complexity 1 28 0 1 693 256 329 7 21 chrX 14161742 14161793 -8261034 + (CGG)n Simple_repeat Simple_repeat 2 52 0 1 693 201 39 0 0 chrX 14161793 14161819 -8261008 + (GGA)n Simple_repeat Simple_repeat 1 26 0 1 693 256 329 7 21 chrX 14161819 14161910 -8260917 + (CGG)n Simple_repeat Simple_repeat 2 91 0 1 693 195 42 0 0 chrX 14162011 14162035 -8260792 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 693 294 314 11 28 chrX 14162302 14162479 -8260348 + (CGG)n Simple_repeat Simple_repeat 1 174 0 1 693 21 36 0 0 chrX 14168438 14168466 -8254361 + AT_rich Low_complexity Low_complexity 1 28 0 1 693 24 0 0 0 chrX 14169064 14169088 -8253739 + AT_rich Low_complexity Low_complexity 1 24 0 1 693 21 0 0 0 chrX 14169105 14169126 -8253701 + AT_rich Low_complexity Low_complexity 1 21 0 1 693 26 30 0 0 chrX 14170994 14171027 -8251800 + AT_rich Low_complexity Low_complexity 1 33 0 1 693 25 0 0 0 chrX 14182628 14182653 -8240174 + AT_rich Low_complexity Low_complexity 1 25 0 1 693 195 203 0 0 chrX 14184181 14184240 -8238587 + A-rich Low_complexity Low_complexity 1 59 0 1 693 28 29 0 0 chrX 14185021 14185056 -8237771 + AT_rich Low_complexity Low_complexity 1 35 0 1 693 24 0 0 0 chrX 14185186 14185210 -8237617 + AT_rich Low_complexity Low_complexity 1 24 0 1 693 258 32 0 0 chrX 14186826 14186857 -8235970 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 693 261 128 0 0 chrX 14186942 14186989 -8235838 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 693 26 0 0 0 chrX 14188027 14188053 -8234774 + AT_rich Low_complexity Low_complexity 1 26 0 1 693 180 77 0 0 chrX 14188262 14188288 -8234539 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1 693 210 37 0 0 chrX 14188637 14188664 -8234163 + (T)n Simple_repeat Simple_repeat 1 27 0 1 693 23 0 0 0 chrX 14189412 14189435 -8233392 + AT_rich Low_complexity Low_complexity 1 23 0 1 693 180 0 0 0 chrX 14191595 14191615 -8231212 + (CAATT)n Simple_repeat Simple_repeat 1 20 0 1 693 23 0 0 0 chrX 14191952 14191975 -8230852 + AT_rich Low_complexity Low_complexity 1 23 0 1 693 239 208 0 19 chrX 14192534 14192588 -8230239 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 693 27 29 0 0 chrX 14194350 14194384 -8228443 + AT_rich Low_complexity Low_complexity 1 34 0 1 693 36 40 0 0 chrX 14194540 14194590 -8228237 + AT_rich Low_complexity Low_complexity 1 50 0 1 693 312 133 0 0 chrX 14194738 14194798 -8228029 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 693 201 121 0 0 chrX 14197529 14197562 -8225265 + (AACTG)n Simple_repeat Simple_repeat 1 33 0 1 693 30 0 0 0 chrX 14198102 14198132 -8224695 + AT_rich Low_complexity Low_complexity 1 30 0 1 693 206 32 32 0 chrX 14198139 14198170 -8224657 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 693 4571 8 0 0 chrX 14198171 14198678 -8224149 + DM176_LTR LTR Gypsy 1 507 0 1 693 37447 4 6 15 chrX 14198678 14202987 -8219840 + DM176_I LTR Gypsy 1 4273 -2147 1 693 7097 6 0 0 chrX 14202970 14203813 -8219014 + DM176_I LTR Gypsy 5578 6420 0 1 693 4571 8 0 0 chrX 14203813 14204320 -8218507 + DM176_LTR LTR Gypsy 1 507 0 1 693 23 0 0 0 chrX 14204388 14204411 -8218416 + AT_rich Low_complexity Low_complexity 1 23 0 1 693 234 128 0 0 chrX 14204584 14204623 -8218204 + (CAATT)n Simple_repeat Simple_repeat 1 39 0 1 693 25 31 0 0 chrX 14204994 14205026 -8217801 + AT_rich Low_complexity Low_complexity 1 32 0 1 693 23 68 0 0 chrX 14206072 14206116 -8216711 + AT_rich Low_complexity Low_complexity 1 44 0 1 693 191 156 44 0 chrX 14207566 14207611 -8215216 + (TGGA)n Simple_repeat Simple_repeat 3 49 0 1 693 255 133 0 0 chrX 14207679 14207724 -8215103 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 693 180 0 0 0 chrX 14208133 14208153 -8214674 + (TAA)n Simple_repeat Simple_repeat 1 20 0 1 693 647 79 0 22 chrX 14208353 14208444 -8214383 - DNAREP1_DM LINE Penelope -136 458 370 1 693 30 0 0 0 chrX 14209537 14209567 -8213260 + AT_rich Low_complexity Low_complexity 1 30 0 1 693 32 43 0 0 chrX 14209797 14209843 -8212984 + AT_rich Low_complexity Low_complexity 1 46 0 1 693 25 0 0 0 chrX 14211109 14211134 -8211693 + AT_rich Low_complexity Low_complexity 1 25 0 1 693 386 60 0 0 chrX 14211570 14211620 -8211207 - DNAREP1_DM LINE Penelope 0 594 545 1 693 542 175 58 131 chrX 14211672 14211863 -8210964 - DNAREP1_DM LINE Penelope -417 177 1 1 693 446 0 19 0 chrX 14212438 14212492 -8210335 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 693 24 0 0 0 chrX 14213407 14213431 -8209396 + AT_rich Low_complexity Low_complexity 1 24 0 1 693 180 111 0 0 chrX 14214002 14214029 -8208798 + (TGGG)n Simple_repeat Simple_repeat 2 28 0 1 693 201 147 0 0 chrX 14214152 14214186 -8208641 + (CAA)n Simple_repeat Simple_repeat 1 34 0 1 693 208 255 0 45 chrX 14214987 14215098 -8207729 + (CAG)n Simple_repeat Simple_repeat 3 108 0 1 693 191 217 0 16 chrX 14215724 14215785 -8207042 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 693 188 111 28 0 chrX 14216979 14217015 -8205812 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 693 207 0 0 0 chrX 14217789 14217812 -8205015 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 693 203 309 0 0 chrX 14218061 14218142 -8204685 + T-rich Low_complexity Low_complexity 1 81 0 1 693 260 91 23 0 chrX 14218720 14218764 -8204063 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 693 25 0 0 0 chrX 14219175 14219200 -8203627 + AT_rich Low_complexity Low_complexity 1 25 0 1 693 231 36 0 0 chrX 14219676 14219704 -8203123 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 693 189 74 0 0 chrX 14219722 14219749 -8203078 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 1 693 23 0 0 0 chrX 14220473 14220496 -8202331 + AT_rich Low_complexity Low_complexity 1 23 0 1 693 269 230 11 22 chrX 14221284 14221373 -8201454 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 693 29 0 0 0 chrX 14221543 14221572 -8201255 + AT_rich Low_complexity Low_complexity 1 29 0 1 693 236 30 0 29 chrX 14222218 14222252 -8200575 + (TTG)n Simple_repeat Simple_repeat 2 34 0 1 693 249 128 0 0 chrX 14225297 14225344 -8197483 + (A)n Simple_repeat Simple_repeat 1 47 0 1 693 210 105 0 0 chrX 14225411 14225449 -8197378 + (TTTTTA)n Simple_repeat Simple_repeat 3 40 0 1 693 192 125 0 0 chrX 14226364 14226396 -8196431 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 693 299 228 97 57 chrX 14228112 14228158 -8194669 + SAR_DM Satellite Satellite 641 877 -595 1 693 319 243 99 50 chrX 14228158 14228340 -8194487 - XDMR_DM Unknown Unknown -1 359 169 1 693 216 111 0 0 chrX 14228767 14228803 -8194024 + (A)n Simple_repeat Simple_repeat 1 36 0 1 693 203 195 0 24 chrX 14228907 14228949 -8193878 + (TATG)n Simple_repeat Simple_repeat 3 43 0 1 693 372 119 0 0 chrX 14229136 14229195 -8193632 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 693 183 42 0 0 chrX 14229342 14229366 -8193461 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 693 21 0 0 0 chrX 14230276 14230297 -8192530 + AT_rich Low_complexity Low_complexity 1 21 0 1 693 201 171 0 0 chrX 14230609 14230644 -8192183 + T-rich Low_complexity Low_complexity 1 35 0 1 693 202 154 0 25 chrX 14230814 14230854 -8191973 + T-rich Low_complexity Low_complexity 3 41 0 1 693 189 74 0 0 chrX 14232275 14232302 -8190525 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 693 188 67 33 0 chrX 14232387 14232417 -8190410 + (CGGAA)n Simple_repeat Simple_repeat 1 31 0 1 693 372 77 0 0 chrX 14233631 14233683 -8189144 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 693 209 281 0 0 chrX 14234606 14234670 -8188157 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 1 693 206 174 22 0 chrX 14234885 14234931 -8187896 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 693 31 26 0 0 chrX 14235870 14235908 -8186919 + AT_rich Low_complexity Low_complexity 1 38 0 1 693 29 0 0 0 chrX 14236064 14236093 -8186734 + AT_rich Low_complexity Low_complexity 1 29 0 1 693 205 254 16 0 chrX 14237111 14237174 -8185653 + GA-rich Low_complexity Low_complexity 3 66 0 1 693 21 0 0 0 chrX 14238860 14238881 -8183946 + AT_rich Low_complexity Low_complexity 1 21 0 1 693 181 119 48 0 chrX 14239155 14239197 -8183630 + A-rich Low_complexity Low_complexity 5 48 0 1 693 241 286 0 0 chrX 14242206 14242283 -8180544 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 693 182 37 0 36 chrX 14243635 14243663 -8179164 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 693 246 32 0 0 chrX 14243944 14243975 -8178852 + (CCAA)n Simple_repeat Simple_repeat 3 33 0 1 693 1157 280 46 32 chrX 14244671 14245410 -8177417 + SAR_DM Satellite Satellite 541 1289 -183 1 693 189 0 0 0 chrX 14246281 14246302 -8176525 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 693 189 0 0 0 chrX 14246718 14246739 -8176088 + (T)n Simple_repeat Simple_repeat 1 21 0 1 693 25 31 0 0 chrX 14247045 14247077 -8175750 + AT_rich Low_complexity Low_complexity 1 32 0 1 693 201 39 0 0 chrX 14247254 14247280 -8175547 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 693 202 278 19 0 chrX 14247358 14247412 -8175415 + CT-rich Low_complexity Low_complexity 2 56 0 1 693 247 212 9 57 chrX 14248567 14248672 -8174155 + (ATGGTG)n Simple_repeat Simple_repeat 6 105 0 1 693 180 0 0 0 chrX 14248889 14248909 -8173918 + (A)n Simple_repeat Simple_repeat 1 20 0 1 693 22 0 0 0 chrX 14250850 14250872 -8171955 + AT_rich Low_complexity Low_complexity 1 22 0 1 693 21 0 0 0 chrX 14251879 14251900 -8170927 + AT_rich Low_complexity Low_complexity 1 21 0 1 693 23 33 0 0 chrX 14252359 14252389 -8170438 + AT_rich Low_complexity Low_complexity 1 30 0 1 693 219 69 0 0 chrX 14252549 14252578 -8170249 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 693 204 135 0 0 chrX 14252685 14252722 -8170105 + (T)n Simple_repeat Simple_repeat 1 37 0 1 693 222 231 0 0 chrX 14253448 14253500 -8169327 + T-rich Low_complexity Low_complexity 1 52 0 1 693 186 118 0 0 chrX 14256196 14256230 -8166597 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 693 201 196 20 0 chrX 14256623 14256674 -8166153 + A-rich Low_complexity Low_complexity 4 55 0 1 693 195 114 0 0 chrX 14257262 14257297 -8165530 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 693 216 97 0 0 chrX 14258758 14258789 -8164038 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1 693 192 40 0 0 chrX 14258818 14258843 -8163984 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 693 211 184 0 0 chrX 14259046 14259084 -8163743 + CT-rich Low_complexity Low_complexity 1 38 0 1 693 237 155 0 0 chrX 14259221 14259279 -8163548 + T-rich Low_complexity Low_complexity 1 58 0 1 693 201 74 0 0 chrX 14259370 14259397 -8163430 + (CGAAA)n Simple_repeat Simple_repeat 4 30 0 1 693 180 0 0 0 chrX 14259897 14259917 -8162910 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 693 248 127 18 0 chrX 14261000 14261055 -8161772 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 693 219 152 0 0 chrX 14261857 14261903 -8160924 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 693 258 32 0 0 chrX 14262241 14262272 -8160555 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 693 264 172 0 0 chrX 14262950 14263008 -8159819 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 693 186 103 0 0 chrX 14263079 14263108 -8159719 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 693 27 0 0 0 chrX 14266231 14266258 -8156569 + AT_rich Low_complexity Low_complexity 1 27 0 1 693 255 31 0 0 chrX 14266648 14266680 -8156147 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 693 207 100 0 0 chrX 14267546 14267576 -8155251 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 693 207 312 0 0 chrX 14269100 14269164 -8153663 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 693 195 42 0 0 chrX 14270884 14270908 -8151919 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 693 231 36 0 0 chrX 14271608 14271636 -8151191 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 693 25 0 0 0 chrX 14272887 14272912 -8149915 + AT_rich Low_complexity Low_complexity 1 25 0 1 693 32 43 0 0 chrX 14274142 14274188 -8148639 + AT_rich Low_complexity Low_complexity 1 46 0 1 693 30 0 0 0 chrX 14274417 14274447 -8148380 + AT_rich Low_complexity Low_complexity 1 30 0 1 693 208 167 75 15 chrX 14276010 14276077 -8146750 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 693 240 100 0 0 chrX 14278040 14278080 -8144747 + (ATTCG)n Simple_repeat Simple_repeat 2 41 0 1 693 330 67 0 0 chrX 14278506 14278551 -8144276 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 693 246 95 0 0 chrX 14278909 14278951 -8143876 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 693 1725 271 47 37 chrX 14281266 14282628 -8140199 + SAR_DM Satellite Satellite 1 1375 -244 1 693 345 82 0 0 chrX 14283145 14283194 -8139633 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 693 239 208 19 19 chrX 14284485 14284539 -8138288 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 693 275 182 30 0 chrX 14285341 14285407 -8137420 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 693 237 273 0 0 chrX 14285760 14285815 -8137012 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 693 21 0 0 0 chrX 14286299 14286320 -8136507 + AT_rich Low_complexity Low_complexity 1 21 0 1 693 28 0 0 0 chrX 14286437 14286465 -8136362 + AT_rich Low_complexity Low_complexity 1 28 0 1 86 229 275 0 14 chrX 14286813 14286883 -8135944 + (TATATG)n Simple_repeat Simple_repeat 1 69 0 1 694 210 118 0 0 chrX 14287005 14287039 -8135788 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 1 694 330 26 0 0 chrX 14287619 14287658 -8135169 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 694 26 50 0 0 chrX 14289081 14289121 -8133706 + AT_rich Low_complexity Low_complexity 1 40 0 1 694 221 75 0 24 chrX 14289522 14289563 -8133264 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 694 240 35 0 0 chrX 14289725 14289754 -8133073 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 694 249 57 0 0 chrX 14290031 14290066 -8132761 + (ACTG)n Simple_repeat Simple_repeat 3 37 0 1 694 23 0 0 0 chrX 14290343 14290366 -8132461 + AT_rich Low_complexity Low_complexity 1 23 0 1 694 225 65 0 0 chrX 14291298 14291329 -8131498 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 694 180 0 0 0 chrX 14292541 14292561 -8130266 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 694 21 0 0 0 chrX 14293366 14293387 -8129440 + AT_rich Low_complexity Low_complexity 1 21 0 1 694 246 143 0 0 chrX 14293721 14293770 -8129057 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 694 218 125 21 0 chrX 14294563 14294611 -8128216 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 694 204 40 0 0 chrX 14294996 14295021 -8127806 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 694 28 48 0 0 chrX 14295631 14295673 -8127154 + AT_rich Low_complexity Low_complexity 1 42 0 1 694 222 37 0 0 chrX 14296239 14296266 -8126561 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 694 216 0 0 0 chrX 14296461 14296485 -8126342 + (A)n Simple_repeat Simple_repeat 1 24 0 1 694 24 0 0 0 chrX 14297199 14297223 -8125604 + AT_rich Low_complexity Low_complexity 1 24 0 1 694 213 163 23 0 chrX 14299080 14299123 -8123704 + T-rich Low_complexity Low_complexity 3 46 0 1 694 183 42 0 0 chrX 14299284 14299308 -8123519 + (A)n Simple_repeat Simple_repeat 1 24 0 1 694 22 0 0 0 chrX 14299506 14299528 -8123299 + AT_rich Low_complexity Low_complexity 1 22 0 1 694 237 33 0 0 chrX 14301682 14301712 -8121115 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 694 219 167 0 0 chrX 14301887 14301929 -8120898 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 1 694 486 119 0 0 chrX 14304189 14304273 -8118554 + (ACTG)n Simple_repeat Simple_repeat 2 85 0 1 694 318 200 0 0 chrX 14304757 14304847 -8117980 - ROO_I LTR Pao -7520 736 647 1 694 186 43 0 0 chrX 14305675 14305698 -8117129 + (GA)n Simple_repeat Simple_repeat 1 23 0 1 694 29 60 0 0 chrX 14306702 14306752 -8116075 + AT_rich Low_complexity Low_complexity 1 50 0 1 694 23 0 0 0 chrX 14307797 14307820 -8115007 + AT_rich Low_complexity Low_complexity 1 23 0 1 694 227 268 0 0 chrX 14308828 14308899 -8113928 + T-rich Low_complexity Low_complexity 1 71 0 1 694 206 118 0 0 chrX 14309469 14309503 -8113324 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 1 694 189 0 0 0 chrX 14309696 14309717 -8113110 + (A)n Simple_repeat Simple_repeat 1 21 0 1 694 24 77 0 0 chrX 14310353 14310405 -8112422 + AT_rich Low_complexity Low_complexity 1 52 0 1 694 43135 1 0 0 chrX 14310405 14315098 -8107729 - FW_DM LINE Jockey 0 4692 1 1 694 384 61 0 0 chrX 14315261 14315310 -8107517 - DNAREP1_DM LINE Penelope 0 594 546 1 694 184 122 0 47 chrX 14316687 14316730 -8106097 + (TTCCG)n Simple_repeat Simple_repeat 4 44 0 1 694 222 91 0 0 chrX 14318339 14318372 -8104455 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 694 231 191 0 0 chrX 14319563 14319610 -8103217 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 694 213 146 0 0 chrX 14320224 14320272 -8102555 + (A)n Simple_repeat Simple_repeat 1 48 0 1 694 1072 267 40 47 chrX 14320816 14321437 -8101390 + SAR_DM Satellite Satellite 373 989 -483 1 694 772 232 64 52 chrX 14321133 14321478 -8101349 - XDMR_DM Unknown Unknown -9 351 3 1 694 22 0 0 0 chrX 14324135 14324157 -8098670 + AT_rich Low_complexity Low_complexity 1 22 0 1 694 252 0 0 0 chrX 14324638 14324666 -8098161 + (AACTG)n Simple_repeat Simple_repeat 1 28 0 1 694 208 139 0 0 chrX 14325574 14325610 -8097217 + (A)n Simple_repeat Simple_repeat 1 36 0 1 694 225 94 0 0 chrX 14328161 14328193 -8094634 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 694 225 94 0 0 chrX 14331197 14331229 -8091598 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 1 694 204 40 0 0 chrX 14332014 14332039 -8090788 + (T)n Simple_repeat Simple_repeat 1 25 0 1 694 201 268 0 0 chrX 14332293 14332349 -8090478 + A-rich Low_complexity Low_complexity 1 56 0 1 694 21 0 0 0 chrX 14333641 14333662 -8089165 + AT_rich Low_complexity Low_complexity 1 21 0 1 694 22 0 0 0 chrX 14334607 14334629 -8088198 + AT_rich Low_complexity Low_complexity 1 22 0 1 694 222 37 0 0 chrX 14334894 14334921 -8087906 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 694 263 122 0 20 chrX 14337379 14337429 -8085398 + (TATG)n Simple_repeat Simple_repeat 3 51 0 1 694 206 156 22 0 chrX 14338178 14338223 -8084604 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 694 228 250 0 0 chrX 14340730 14340774 -8082053 + (CATA)n Simple_repeat Simple_repeat 4 47 0 1 694 219 36 0 0 chrX 14341834 14341862 -8080965 + (ATTCG)n Simple_repeat Simple_repeat 1 28 0 1 694 198 71 0 0 chrX 14342139 14342167 -8080660 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 694 27 29 0 0 chrX 14343077 14343111 -8079716 + AT_rich Low_complexity Low_complexity 1 34 0 1 694 180 0 0 0 chrX 14343546 14343566 -8079261 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 694 204 40 0 0 chrX 14344456 14344481 -8078346 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 694 22 35 0 0 chrX 14345091 14345120 -8077707 + AT_rich Low_complexity Low_complexity 1 29 0 1 694 195 114 0 0 chrX 14345806 14345841 -8076986 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 694 208 246 16 0 chrX 14345907 14345968 -8076859 + GA-rich Low_complexity Low_complexity 4 65 0 1 694 21 0 0 0 chrX 14347245 14347266 -8075561 + AT_rich Low_complexity Low_complexity 1 21 0 1 694 211 278 0 0 chrX 14349741 14349813 -8073014 + (TAAA)n Simple_repeat Simple_repeat 2 73 0 1 694 201 236 0 0 chrX 14352124 14352179 -8070648 + (CAGAGA)n Simple_repeat Simple_repeat 4 58 0 1 694 222 200 0 0 chrX 14352603 14352653 -8070174 + (CAG)n Simple_repeat Simple_repeat 2 51 0 1 694 210 233 0 0 chrX 14354651 14354711 -8068116 + CT-rich Low_complexity Low_complexity 1 60 0 1 694 261 155 0 0 chrX 14355819 14355877 -8066950 + T-rich Low_complexity Low_complexity 1 58 0 1 694 230 125 21 0 chrX 14356223 14356271 -8066556 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 694 243 0 0 0 chrX 14356704 14356731 -8066096 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 694 25 31 0 0 chrX 14357106 14357138 -8065689 + AT_rich Low_complexity Low_complexity 1 32 0 1 694 201 74 0 0 chrX 14357169 14357196 -8065631 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 694 24 53 0 0 chrX 14360875 14360913 -8061914 + AT_rich Low_complexity Low_complexity 1 38 0 1 694 27 49 0 0 chrX 14362525 14362566 -8060261 + AT_rich Low_complexity Low_complexity 1 41 0 1 694 2084 254 45 38 chrX 14363399 14364668 -8058159 + SAR_DM Satellite Satellite 1 1277 -165 1 694 228 271 0 0 chrX 14365145 14365204 -8057623 + (TCCG)n Simple_repeat Simple_repeat 2 60 0 1 694 21 0 0 0 chrX 14365938 14365959 -8056868 + AT_rich Low_complexity Low_complexity 1 21 0 1 694 31 26 0 0 chrX 14366496 14366534 -8056293 + AT_rich Low_complexity Low_complexity 1 38 0 1 694 207 200 0 0 chrX 14366629 14366674 -8056153 + T-rich Low_complexity Low_complexity 1 45 0 1 694 210 118 0 0 chrX 14367518 14367552 -8055275 + (CTG)n Simple_repeat Simple_repeat 3 36 0 1 694 192 77 0 0 chrX 14367726 14367752 -8055075 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 694 212 170 0 54 chrX 14367835 14367891 -8054936 + (TGG)n Simple_repeat Simple_repeat 3 55 0 1 694 195 69 0 0 chrX 14370506 14370535 -8052292 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 694 201 121 0 0 chrX 14371018 14371051 -8051776 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1 694 195 114 0 0 chrX 14371989 14372024 -8050803 + (T)n Simple_repeat Simple_repeat 1 35 0 1 694 21 36 0 0 chrX 14374908 14374936 -8047891 + AT_rich Low_complexity Low_complexity 1 28 0 1 694 290 218 9 0 chrX 14375492 14375602 -8047225 + (CAT)n Simple_repeat Simple_repeat 1 111 0 1 694 297 139 75 12 chrX 14376106 14376186 -8046641 + ROO_I LTR Pao 664 748 -7508 1 694 26 0 0 0 chrX 14376562 14376588 -8046239 + AT_rich Low_complexity Low_complexity 1 26 0 1 694 25 0 0 0 chrX 14377385 14377410 -8045417 + AT_rich Low_complexity Low_complexity 1 25 0 1 694 321 47 0 0 chrX 14377480 14377523 -8045304 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 694 24 0 0 0 chrX 14379974 14379998 -8042829 + AT_rich Low_complexity Low_complexity 1 24 0 1 694 237 284 0 13 chrX 14386837 14386912 -8035915 + (CAA)n Simple_repeat Simple_repeat 1 74 0 1 694 28 29 0 0 chrX 14387235 14387270 -8035557 + AT_rich Low_complexity Low_complexity 1 35 0 1 694 203 171 0 0 chrX 14389938 14389979 -8032848 + T-rich Low_complexity Low_complexity 2 42 0 1 694 23 0 0 0 chrX 14391361 14391384 -8031443 + AT_rich Low_complexity Low_complexity 1 23 0 1 694 214 50 0 48 chrX 14393308 14393350 -8029477 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 1 694 240 143 0 0 chrX 14395963 14396005 -8026822 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 1 694 35 0 0 0 chrX 14396772 14396807 -8026020 + AT_rich Low_complexity Low_complexity 1 35 0 1 694 23 0 0 0 chrX 14397273 14397296 -8025531 + AT_rich Low_complexity Low_complexity 1 23 0 1 694 264 137 0 0 chrX 14398054 14398105 -8024722 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 694 207 114 0 0 chrX 14398322 14398357 -8024470 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 694 37 39 0 0 chrX 14398904 14398955 -8023872 + AT_rich Low_complexity Low_complexity 1 51 0 1 694 29 84 0 0 chrX 14399953 14400024 -8022803 + AT_rich Low_complexity Low_complexity 1 71 0 1 694 247 228 99 50 chrX 14406551 14406706 -8016121 + XDMR Unknown Unknown 134 299 -61 1 694 955 286 40 28 chrX 14406628 14407222 -8015605 - SAR_DM Satellite Satellite -501 601 1 1 694 192 97 0 0 chrX 14407984 14408015 -8014812 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 694 23 54 0 0 chrX 14410142 14410179 -8012648 + AT_rich Low_complexity Low_complexity 1 37 0 1 694 207 0 0 0 chrX 14410634 14410657 -8012170 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 694 24 0 0 0 chrX 14411214 14411238 -8011589 + AT_rich Low_complexity Low_complexity 1 24 0 1 694 234 0 0 0 chrX 14411564 14411590 -8011237 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 694 180 97 0 0 chrX 14412676 14412707 -8010120 + (A)n Simple_repeat Simple_repeat 1 31 0 1 694 23 0 0 0 chrX 14413948 14413971 -8008856 + AT_rich Low_complexity Low_complexity 1 23 0 1 694 24 0 0 0 chrX 14414113 14414137 -8008690 + AT_rich Low_complexity Low_complexity 1 24 0 1 694 30 59 0 0 chrX 14415712 14415763 -8007064 + AT_rich Low_complexity Low_complexity 1 51 0 1 694 25 75 0 0 chrX 14416542 14416595 -8006232 + AT_rich Low_complexity Low_complexity 1 53 0 1 694 24 53 0 0 chrX 14417143 14417181 -8005646 + AT_rich Low_complexity Low_complexity 1 38 0 1 695 186 43 0 0 chrX 14423351 14423374 -7999453 + (CAA)n Simple_repeat Simple_repeat 1 23 0 1 695 291 28 0 0 chrX 14424721 14424757 -7998070 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 695 201 74 0 0 chrX 14424879 14424906 -7997921 + (ACTG)n Simple_repeat Simple_repeat 3 29 0 1 695 200 177 32 0 chrX 14425135 14425197 -7997630 + (CAGT)n Simple_repeat Simple_repeat 1 64 0 1 695 222 105 0 0 chrX 14427491 14427529 -7995298 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 695 213 65 0 0 chrX 14427668 14427699 -7995128 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 695 275 191 0 0 chrX 14428434 14428481 -7994346 + (CCCCAG)n Simple_repeat Simple_repeat 1 47 0 1 695 195 186 0 0 chrX 14430437 14430480 -7992347 + T-rich Low_complexity Low_complexity 1 43 0 1 695 239 278 0 0 chrX 14432691 14432745 -7990082 + (TTGGGG)n Simple_repeat Simple_repeat 6 59 0 1 695 202 211 0 0 chrX 14434363 14434401 -7988426 + (TAGGG)n Simple_repeat Simple_repeat 3 40 0 1 695 21 0 0 0 chrX 14434877 14434898 -7987929 + AT_rich Low_complexity Low_complexity 1 21 0 1 695 21 57 0 0 chrX 14436038 14436073 -7986754 + AT_rich Low_complexity Low_complexity 1 35 0 1 695 201 333 0 0 chrX 14436335 14436389 -7986438 + C-rich Low_complexity Low_complexity 1 54 0 1 695 318 87 0 0 chrX 14438857 14438903 -7983924 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 695 27 0 0 0 chrX 14441269 14441296 -7981531 + AT_rich Low_complexity Low_complexity 1 27 0 1 695 23 68 0 0 chrX 14442144 14442188 -7980639 + AT_rich Low_complexity Low_complexity 1 44 0 1 695 252 59 0 0 chrX 14442337 14442371 -7980456 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 695 24 32 0 0 chrX 14443109 14443140 -7979687 + AT_rich Low_complexity Low_complexity 1 31 0 1 695 26 50 0 0 chrX 14443165 14443205 -7979622 + AT_rich Low_complexity Low_complexity 1 40 0 1 695 203 286 0 0 chrX 14443449 14443505 -7979322 + (ATG)n Simple_repeat Simple_repeat 3 58 0 1 695 240 35 0 0 chrX 14444831 14444860 -7977967 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 695 25 0 0 0 chrX 14445127 14445152 -7977675 + AT_rich Low_complexity Low_complexity 1 25 0 1 695 4716 4 2 0 chrX 14445731 14446248 -7976579 - NOMAD_LTR LTR Gypsy 0 518 1 1 695 61442 0 1 0 chrX 14446248 14452816 -7970011 - NOMAD_I LTR Gypsy 0 6572 1 1 695 4716 4 2 0 chrX 14452816 14453333 -7969494 - NOMAD_LTR LTR Gypsy 0 518 1 1 695 252 59 0 0 chrX 14453333 14453367 -7969460 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 695 189 0 0 0 chrX 14454856 14454877 -7967950 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 695 345 24 0 0 chrX 14455406 14455448 -7967379 + (CAG)n Simple_repeat Simple_repeat 3 44 0 1 695 26 30 0 0 chrX 14455748 14455781 -7967046 + AT_rich Low_complexity Low_complexity 1 33 0 1 695 225 0 0 0 chrX 14458803 14458828 -7963999 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 695 535 328 49 22 chrX 14459779 14460231 -7962596 + SAR_DM Satellite Satellite 583 1046 -426 1 695 264 172 0 0 chrX 14460698 14460756 -7962071 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 695 180 77 0 0 chrX 14460912 14460938 -7961889 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 695 243 173 0 0 chrX 14461101 14461153 -7961674 + (CAGT)n Simple_repeat Simple_repeat 1 52 0 1 695 207 114 0 0 chrX 14461196 14461231 -7961596 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 695 28 61 0 0 chrX 14461333 14461382 -7961445 + AT_rich Low_complexity Low_complexity 1 49 0 1 695 21 0 0 0 chrX 14461411 14461432 -7961395 + AT_rich Low_complexity Low_complexity 1 21 0 1 695 25 0 0 0 chrX 14461581 14461606 -7961221 + AT_rich Low_complexity Low_complexity 1 25 0 1 695 183 129 0 0 chrX 14461770 14461801 -7961026 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 695 185 154 0 25 chrX 14461936 14461976 -7960851 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 695 21 57 0 0 chrX 14462245 14462280 -7960547 + AT_rich Low_complexity Low_complexity 1 35 0 1 695 21 36 0 0 chrX 14464066 14464094 -7958733 + AT_rich Low_complexity Low_complexity 1 28 0 1 695 30 89 0 0 chrX 14464934 14465013 -7957814 + AT_rich Low_complexity Low_complexity 1 79 0 1 695 345 62 0 0 chrX 14465251 14465299 -7957528 + (CTG)n Simple_repeat Simple_repeat 2 49 0 1 695 375 113 0 0 chrX 14467134 14467196 -7955631 + (TTG)n Simple_repeat Simple_repeat 3 64 0 1 695 261 128 0 0 chrX 14469498 14469545 -7953282 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 695 198 0 0 0 chrX 14469700 14469722 -7953105 + (CTG)n Simple_repeat Simple_repeat 1 22 0 1 695 29 0 0 0 chrX 14469845 14469874 -7952953 + AT_rich Low_complexity Low_complexity 1 29 0 1 695 270 214 33 74 chrX 14475264 14475385 -7947442 - DNAREP1_DM LINE Penelope 0 594 479 1 695 22 35 0 0 chrX 14476167 14476196 -7946631 + AT_rich Low_complexity Low_complexity 1 29 0 1 695 243 177 145 0 chrX 14477101 14477163 -7945664 + DNAREP1_DM LINE Penelope 245 315 -279 1 695 1553 118 85 33 chrX 14477231 14477502 -7945325 + DNAREP1_DM LINE Penelope 310 594 0 1 695 32 0 0 0 chrX 14477563 14477595 -7945232 + AT_rich Low_complexity Low_complexity 1 32 0 1 695 25 0 0 0 chrX 14478549 14478574 -7944253 + AT_rich Low_complexity Low_complexity 1 25 0 1 695 43 35 0 0 chrX 14478904 14478961 -7943866 + AT_rich Low_complexity Low_complexity 1 57 0 1 695 23 33 0 0 chrX 14479207 14479237 -7943590 + AT_rich Low_complexity Low_complexity 1 30 0 1 695 279 231 0 13 chrX 14479356 14479435 -7943392 + T-rich Low_complexity Low_complexity 2 79 0 1 695 184 140 0 57 chrX 14483664 14483717 -7939110 + (CATA)n Simple_repeat Simple_repeat 3 52 0 1 695 1720 0 0 0 chrX 14483762 14483948 -7938879 + POGON1 DNA Pogo 1 186 0 1 695 221 111 44 0 chrX 14484740 14484785 -7938042 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 695 296 83 21 0 chrX 14485304 14485352 -7937475 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 695 243 164 0 0 chrX 14485493 14485554 -7937273 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 695 218 164 18 0 chrX 14486800 14486855 -7935972 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 695 21 0 0 0 chrX 14487209 14487230 -7935597 + AT_rich Low_complexity Low_complexity 1 21 0 1 695 201 74 0 0 chrX 14493225 14493252 -7929575 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 695 416 99 0 14 chrX 14493400 14493472 -7929355 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 695 345 62 0 0 chrX 14496102 14496150 -7926677 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 695 204 218 0 0 chrX 14496403 14496458 -7926369 + A-rich Low_complexity Low_complexity 1 55 0 1 695 1160 126 9 28 chrX 14499312 14499525 -7923302 + XDMR Unknown Unknown 153 361 0 1 695 1777 255 20 22 chrX 14499363 14499525 -7923302 - SAR_DM Satellite Satellite -594 878 507 1 695 2545 89 0 3 chrX 14499525 14499887 -7922940 + XDMR Unknown Unknown 1 361 0 1 695 1777 255 20 22 chrX 14499887 14500000 -7922827 - SAR_DM Satellite Satellite -594 506 243 1 695 1533 97 0 4 chrX 14500000 14500249 -7922578 + XDMR Unknown Unknown 114 361 0 1 695 909 72 0 2 chrX 14500249 14500393 -7922434 + XDMR Unknown Unknown 1 128 -233 1 695 204 205 0 0 chrX 14500935 14500974 -7921853 + (CAG)n Simple_repeat Simple_repeat 2 40 0 1 695 28 61 0 0 chrX 14502073 14502122 -7920705 + AT_rich Low_complexity Low_complexity 1 49 0 1 695 24 32 0 0 chrX 14503494 14503525 -7919302 + AT_rich Low_complexity Low_complexity 1 31 0 1 695 190 179 0 35 chrX 14506325 14506383 -7916444 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 695 21 0 0 0 chrX 14506470 14506491 -7916336 + AT_rich Low_complexity Low_complexity 1 21 0 1 695 309 109 0 0 chrX 14507835 14507881 -7914946 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 695 234 91 0 0 chrX 14508894 14508927 -7913900 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 695 30 0 0 0 chrX 14509274 14509304 -7913523 + AT_rich Low_complexity Low_complexity 1 30 0 1 695 21 0 0 0 chrX 14510593 14510614 -7912213 + AT_rich Low_complexity Low_complexity 1 21 0 1 695 201 39 0 0 chrX 14513801 14513827 -7909000 + (TTTTTG)n Simple_repeat Simple_repeat 4 29 0 1 695 378 91 0 0 chrX 14513937 14513992 -7908835 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1 695 186 43 0 0 chrX 14516693 14516716 -7906111 + (TTCGG)n Simple_repeat Simple_repeat 5 27 0 1 695 203 222 0 40 chrX 14517697 14517772 -7905055 + (CAAAC)n Simple_repeat Simple_repeat 2 73 0 1 695 30 0 0 0 chrX 14518072 14518102 -7904725 + AT_rich Low_complexity Low_complexity 1 30 0 1 695 180 0 0 0 chrX 14518748 14518768 -7904059 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 695 43 85 0 0 chrX 14519468 14519574 -7903253 + AT_rich Low_complexity Low_complexity 1 106 0 1 695 218 213 0 0 chrX 14520310 14520357 -7902470 + T-rich Low_complexity Low_complexity 1 47 0 1 695 303 28 0 0 chrX 14520580 14520616 -7902211 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 695 22 80 0 0 chrX 14520881 14520931 -7901896 + AT_rich Low_complexity Low_complexity 1 50 0 1 695 180 0 0 0 chrX 14521248 14521268 -7901559 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 695 24 32 0 0 chrX 14523644 14523675 -7899152 + AT_rich Low_complexity Low_complexity 1 31 0 1 695 183 156 0 0 chrX 14523850 14523882 -7898945 + (CGGA)n Simple_repeat Simple_repeat 4 35 0 1 695 207 0 0 0 chrX 14524101 14524124 -7898703 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 695 220 238 0 0 chrX 14524125 14524167 -7898660 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 1 695 27 62 0 0 chrX 14524370 14524418 -7898409 + AT_rich Low_complexity Low_complexity 1 48 0 1 695 198 71 0 0 chrX 14526897 14526925 -7895902 + (CGATG)n Simple_repeat Simple_repeat 4 31 0 1 695 216 0 0 0 chrX 14529234 14529258 -7893569 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 695 219 69 0 0 chrX 14529651 14529680 -7893147 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 695 44341 1 0 0 chrX 14530552 14535929 -7886898 - I_DM LINE I -756 5475 99 1 695 28 0 0 0 chrX 14540419 14540447 -7882380 + AT_rich Low_complexity Low_complexity 1 28 0 1 695 23 0 0 0 chrX 14540842 14540865 -7881962 + AT_rich Low_complexity Low_complexity 1 23 0 1 695 203 175 0 0 chrX 14541425 14541465 -7881362 + T-rich Low_complexity Low_complexity 1 40 0 1 695 243 103 0 0 chrX 14541850 14541889 -7880938 + (A)n Simple_repeat Simple_repeat 1 39 0 1 695 189 89 67 0 chrX 14542670 14542715 -7880112 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 695 270 0 0 0 chrX 14542823 14542853 -7879974 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 695 189 74 0 0 chrX 14543529 14543556 -7879271 + (ATTCG)n Simple_repeat Simple_repeat 3 29 0 1 695 205 250 13 26 chrX 14543715 14543793 -7879034 + (TTG)n Simple_repeat Simple_repeat 2 78 0 1 695 249 33 0 0 chrX 14544818 14544848 -7877979 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 695 236 211 0 17 chrX 14547914 14547972 -7874855 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 696 21 0 0 0 chrX 14550177 14550198 -7872629 + GC_rich Low_complexity Low_complexity 1 21 0 1 696 192 125 0 0 chrX 14550296 14550328 -7872499 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 696 271 153 0 84 chrX 14552595 14552702 -7870125 + (TGGA)n Simple_repeat Simple_repeat 3 100 0 1 696 24 53 0 0 chrX 14553051 14553089 -7869738 + AT_rich Low_complexity Low_complexity 1 38 0 1 696 510 189 36 0 chrX 14554673 14554784 -7868043 + XDMR_DM Unknown Unknown 175 289 -71 1 696 1084 129 31 0 chrX 14554802 14554996 -7867831 + XDMR Unknown Unknown 149 348 -13 1 696 189 154 0 0 chrX 14557777 14557816 -7865011 + (CAGT)n Simple_repeat Simple_repeat 1 39 0 1 696 227 196 0 0 chrX 14557895 14557941 -7864886 + GA-rich Low_complexity Low_complexity 3 48 0 1 696 23 33 0 0 chrX 14560326 14560356 -7862471 + AT_rich Low_complexity Low_complexity 1 30 0 1 696 21 0 0 0 chrX 14560873 14560894 -7861933 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 204 67 0 0 chrX 14561721 14561751 -7861076 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 696 31 0 0 0 chrX 14562138 14562169 -7860658 + AT_rich Low_complexity Low_complexity 1 31 0 1 696 186 71 0 0 chrX 14564735 14564763 -7858064 + (T)n Simple_repeat Simple_repeat 1 28 0 1 696 25 31 0 0 chrX 14565167 14565199 -7857628 + AT_rich Low_complexity Low_complexity 1 32 0 1 696 200 184 0 39 chrX 14565449 14565500 -7857327 + T-rich Low_complexity Low_complexity 2 50 0 1 696 186 71 0 0 chrX 14567430 14567458 -7855369 + (T)n Simple_repeat Simple_repeat 1 28 0 1 696 225 0 0 0 chrX 14568530 14568555 -7854272 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 696 204 97 0 0 chrX 14570162 14570193 -7852634 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 696 33 0 0 0 chrX 14570848 14570881 -7851946 + AT_rich Low_complexity Low_complexity 1 33 0 1 696 221 167 0 0 chrX 14571546 14571588 -7851239 + (GATTG)n Simple_repeat Simple_repeat 3 44 0 1 696 225 0 0 0 chrX 14572681 14572706 -7850121 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1 696 26 30 0 0 chrX 14573420 14573453 -7849374 + AT_rich Low_complexity Low_complexity 1 33 0 1 696 285 89 0 0 chrX 14576885 14576930 -7845897 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 696 192 40 0 0 chrX 14578404 14578429 -7844398 + (T)n Simple_repeat Simple_repeat 1 25 0 1 696 239 71 24 0 chrX 14580292 14580334 -7842493 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 696 273 75 0 0 chrX 14580400 14580440 -7842387 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 696 246 32 0 0 chrX 14580496 14580527 -7842300 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 696 26 30 0 0 chrX 14584188 14584221 -7838606 + AT_rich Low_complexity Low_complexity 1 33 0 1 696 384 150 0 0 chrX 14586529 14586609 -7836218 + (TCCA)n Simple_repeat Simple_repeat 4 83 0 1 696 291 28 0 0 chrX 14587760 14587796 -7835031 + (GGATG)n Simple_repeat Simple_repeat 5 40 0 1 696 180 0 0 0 chrX 14589750 14589770 -7833057 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 696 399 273 26 20 chrX 14591129 14591282 -7831545 - XDMR Unknown Unknown -205 156 3 1 696 1649 265 21 19 chrX 14591183 14591284 -7831543 + SAR_DM Satellite Satellite 255 492 -980 1 696 2459 108 0 0 chrX 14591284 14591645 -7831182 - XDMR Unknown Unknown 0 361 1 1 696 1649 265 21 19 chrX 14591645 14591806 -7831021 + SAR_DM Satellite Satellite 493 878 -594 1 696 26 0 0 0 chrX 14592198 14592224 -7830603 + AT_rich Low_complexity Low_complexity 1 26 0 1 696 28 29 0 0 chrX 14594059 14594094 -7828733 + AT_rich Low_complexity Low_complexity 1 35 0 1 696 272 207 0 33 chrX 14594281 14594341 -7828486 + (TTCGGG)n Simple_repeat Simple_repeat 5 62 0 1 696 22 56 0 0 chrX 14598700 14598736 -7824091 + AT_rich Low_complexity Low_complexity 1 36 0 1 696 29 98 0 0 chrX 14601237 14601329 -7821498 + AT_rich Low_complexity Low_complexity 1 92 0 1 696 384 138 0 0 chrX 14602267 14602332 -7820495 + (CAAA)n Simple_repeat Simple_repeat 3 67 0 1 696 27 49 0 0 chrX 14602895 14602936 -7819891 + AT_rich Low_complexity Low_complexity 1 41 0 1 696 213 94 0 0 chrX 14604223 14604255 -7818572 + (CTG)n Simple_repeat Simple_repeat 3 34 0 1 696 183 139 0 0 chrX 14604315 14604351 -7818476 + (A)n Simple_repeat Simple_repeat 1 36 0 1 696 200 154 0 49 chrX 14605978 14606019 -7816808 + C-rich Low_complexity Low_complexity 1 39 0 1 696 276 30 0 0 chrX 14606609 14606642 -7816185 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 696 279 93 0 0 chrX 14608555 14608598 -7814229 + (CATA)n Simple_repeat Simple_repeat 2 44 0 1 696 222 37 0 0 chrX 14608809 14608836 -7813991 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 696 228 86 0 0 chrX 14609593 14609628 -7813199 + (CCAA)n Simple_repeat Simple_repeat 3 37 0 1 696 220 70 47 0 chrX 14609649 14609692 -7813135 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 696 21 0 0 0 chrX 14613025 14613046 -7809781 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 182 62 31 0 chrX 14613191 14613223 -7809604 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1 696 1698 175 82 73 chrX 14613223 14613699 -7809128 - DNAREP1_DM LINE Penelope -113 481 2 1 696 22 0 0 0 chrX 14613984 14614006 -7808821 + AT_rich Low_complexity Low_complexity 1 22 0 1 696 183 42 0 0 chrX 14615214 14615238 -7807589 + (T)n Simple_repeat Simple_repeat 1 24 0 1 696 22 0 0 0 chrX 14615988 14616010 -7806817 + AT_rich Low_complexity Low_complexity 1 22 0 1 696 214 228 24 37 chrX 14617654 14617736 -7805091 + T-rich Low_complexity Low_complexity 2 82 0 1 696 180 0 0 0 chrX 14618141 14618161 -7804666 + (A)n Simple_repeat Simple_repeat 1 20 0 1 696 21 0 0 0 chrX 14618690 14618711 -7804116 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 23 33 0 0 chrX 14619509 14619539 -7803288 + AT_rich Low_complexity Low_complexity 1 30 0 1 696 238 192 0 0 chrX 14620214 14620266 -7802561 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 696 309 51 0 0 chrX 14620626 14620665 -7802162 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 696 207 208 0 20 chrX 14621322 14621371 -7801456 + (CAACC)n Simple_repeat Simple_repeat 2 49 0 1 696 183 139 0 0 chrX 14624785 14624821 -7798006 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 1 696 208 329 0 0 chrX 14624862 14624932 -7797895 + T-rich Low_complexity Low_complexity 1 70 0 1 696 270 95 0 0 chrX 14625154 14625196 -7797631 + (TCG)n Simple_repeat Simple_repeat 3 44 0 1 696 273 98 0 0 chrX 14625262 14625303 -7797524 + (CTG)n Simple_repeat Simple_repeat 2 42 0 1 696 22 0 0 0 chrX 14625891 14625913 -7796914 + AT_rich Low_complexity Low_complexity 1 22 0 1 696 200 0 100 0 chrX 14625966 14625996 -7796831 + (ACTCG)n Simple_repeat Simple_repeat 3 35 0 1 696 408 130 0 0 chrX 14626748 14626817 -7796010 + (CAG)n Simple_repeat Simple_repeat 2 70 0 1 696 216 140 0 91 chrX 14626996 14627051 -7795776 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 696 29 0 0 0 chrX 14627550 14627579 -7795248 + AT_rich Low_complexity Low_complexity 1 29 0 1 696 21 36 0 0 chrX 14627705 14627733 -7795094 + AT_rich Low_complexity Low_complexity 1 28 0 1 696 251 54 0 26 chrX 14628558 14628596 -7794231 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 696 30 0 0 0 chrX 14629711 14629741 -7793086 + AT_rich Low_complexity Low_complexity 1 30 0 1 696 26 30 0 0 chrX 14631941 14631974 -7790853 + AT_rich Low_complexity Low_complexity 1 33 0 1 696 210 143 0 0 chrX 14632187 14632222 -7790605 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 696 190 106 21 21 chrX 14635606 14635654 -7787173 + (TTTTTG)n Simple_repeat Simple_repeat 4 51 0 1 696 23 0 0 0 chrX 14638065 14638088 -7784739 + AT_rich Low_complexity Low_complexity 1 23 0 1 696 180 0 0 0 chrX 14638986 14639006 -7783821 + (CATCC)n Simple_repeat Simple_repeat 1 20 0 1 696 23 33 0 0 chrX 14642426 14642456 -7780371 + AT_rich Low_complexity Low_complexity 1 30 0 1 696 210 156 0 0 chrX 14643095 14643140 -7779687 + (TTTCG)n Simple_repeat Simple_repeat 2 46 0 1 696 198 150 0 0 chrX 14645068 14645108 -7777719 + (T)n Simple_repeat Simple_repeat 1 40 0 1 696 32 0 0 0 chrX 14646799 14646831 -7775996 + AT_rich Low_complexity Low_complexity 1 32 0 1 696 266 125 36 0 chrX 14647539 14647595 -7775232 + (CACCAT)n Simple_repeat Simple_repeat 3 60 0 1 696 192 40 0 0 chrX 14647619 14647644 -7775183 + (TCG)n Simple_repeat Simple_repeat 2 26 0 1 696 331 320 0 23 chrX 14647790 14647921 -7774906 + (CTGGGG)n Simple_repeat Simple_repeat 2 129 0 1 696 27 0 0 0 chrX 14648018 14648045 -7774782 + AT_rich Low_complexity Low_complexity 1 27 0 1 696 22 35 0 0 chrX 14649480 14649509 -7773318 + AT_rich Low_complexity Low_complexity 1 29 0 1 696 21 0 0 0 chrX 14651700 14651721 -7771106 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 31 58 0 0 chrX 14653932 14653984 -7768843 + AT_rich Low_complexity Low_complexity 1 52 0 1 696 31 96 0 0 chrX 14654409 14654503 -7768324 + AT_rich Low_complexity Low_complexity 1 94 0 1 696 180 77 0 0 chrX 14655613 14655639 -7767188 + (T)n Simple_repeat Simple_repeat 1 26 0 1 696 297 51 0 0 chrX 14656259 14656298 -7766529 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 696 21 71 0 0 chrX 14656567 14656609 -7766218 + AT_rich Low_complexity Low_complexity 1 42 0 1 696 26 30 0 0 chrX 14657610 14657643 -7765184 + AT_rich Low_complexity Low_complexity 1 33 0 1 696 185 65 0 31 chrX 14658330 14658362 -7764465 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 696 26 74 0 0 chrX 14658366 14658420 -7764407 + AT_rich Low_complexity Low_complexity 1 54 0 1 696 240 35 0 0 chrX 14659212 14659241 -7763586 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 696 248 242 0 0 chrX 14659249 14659311 -7763516 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 1 696 230 159 0 0 chrX 14659671 14659715 -7763112 + T-rich Low_complexity Low_complexity 1 44 0 1 696 221 119 0 23 chrX 14660273 14660316 -7762511 + (CGGT)n Simple_repeat Simple_repeat 2 43 0 1 696 2708 93 147 31 chrX 14660502 14660979 -7761848 + DNAREP1_DM LINE Penelope 1 532 -62 1 696 333 0 0 0 chrX 14662923 14662960 -7759867 + (T)n Simple_repeat Simple_repeat 1 37 0 1 696 21 57 0 0 chrX 14663429 14663464 -7759363 + AT_rich Low_complexity Low_complexity 1 35 0 1 696 457 73 206 0 chrX 14664498 14664566 -7758261 - DNAREP1_DM LINE Penelope -71 523 442 1 696 234 86 0 0 chrX 14664585 14664620 -7758207 - DNAREP1_DM LINE Penelope -253 341 307 1 696 961 110 52 0 chrX 14664609 14664764 -7758063 - DNAREP1_DM LINE Penelope -431 163 1 1 696 32 0 0 0 chrX 14665268 14665300 -7757527 + AT_rich Low_complexity Low_complexity 1 32 0 1 696 249 33 0 0 chrX 14666270 14666300 -7756527 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 696 25 0 0 0 chrX 14666589 14666614 -7756213 + AT_rich Low_complexity Low_complexity 1 25 0 1 696 28 0 0 0 chrX 14667358 14667386 -7755441 + AT_rich Low_complexity Low_complexity 1 28 0 1 696 22 103 0 0 chrX 14667981 14668059 -7754768 + AT_rich Low_complexity Low_complexity 1 78 0 1 696 22 35 0 0 chrX 14670829 14670858 -7751969 + AT_rich Low_complexity Low_complexity 1 29 0 1 696 40847 1 0 0 chrX 14672129 14676850 -7745977 - DOC LINE Jockey 0 4725 4 1 696 236 130 109 0 chrX 14678421 14678467 -7744360 - DNAREP1_DM LINE Penelope -543 51 1 1 696 21 0 0 0 chrX 14678847 14678868 -7743959 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 24 32 0 0 chrX 14679109 14679140 -7743687 + AT_rich Low_complexity Low_complexity 1 31 0 1 697 255 31 0 0 chrX 14680412 14680444 -7742383 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 1 697 26 30 0 0 chrX 14681505 14681538 -7741289 + AT_rich Low_complexity Low_complexity 1 33 0 1 697 25 0 0 0 chrX 14681710 14681735 -7741092 + AT_rich Low_complexity Low_complexity 1 25 0 1 697 234 105 0 0 chrX 14683104 14683142 -7739685 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 697 230 0 0 32 chrX 14683394 14683425 -7739402 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 697 243 157 0 0 chrX 14683518 14683569 -7739258 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 697 330 154 44 0 chrX 14683778 14683869 -7738958 - ROO_I LTR Pao -7530 726 632 1 697 215 214 0 0 chrX 14684394 14684450 -7738377 + (TCG)n Simple_repeat Simple_repeat 3 58 0 1 697 247 286 0 0 chrX 14684615 14684692 -7738135 + (CTG)n Simple_repeat Simple_repeat 3 79 0 1 697 24 0 0 0 chrX 14684975 14684999 -7737828 + AT_rich Low_complexity Low_complexity 1 24 0 1 697 372 295 0 9 chrX 14685414 14685527 -7737300 + (CTG)n Simple_repeat Simple_repeat 3 114 0 1 697 306 98 0 0 chrX 14686342 14686393 -7736434 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 697 195 42 0 0 chrX 14686917 14686941 -7735886 + (TTA)n Simple_repeat Simple_repeat 3 26 0 1 697 316 288 32 8 chrX 14687515 14687641 -7735186 + (CTGGGG)n Simple_repeat Simple_repeat 1 129 0 1 697 468 62 0 0 chrX 14687693 14687757 -7735070 + (CTG)n Simple_repeat Simple_repeat 2 65 0 1 697 21 0 0 0 chrX 14688217 14688238 -7734589 + AT_rich Low_complexity Low_complexity 1 21 0 1 697 33 0 0 0 chrX 14690651 14690684 -7732143 + AT_rich Low_complexity Low_complexity 1 33 0 1 697 24 53 0 0 chrX 14690735 14690773 -7732054 + AT_rich Low_complexity Low_complexity 1 38 0 1 697 201 39 0 0 chrX 14691227 14691253 -7731574 + (CGAA)n Simple_repeat Simple_repeat 2 27 0 1 697 204 371 0 0 chrX 14691407 14691504 -7731323 + (CCG)n Simple_repeat Simple_repeat 2 98 0 1 697 23 0 0 0 chrX 14692036 14692059 -7730768 + AT_rich Low_complexity Low_complexity 1 23 0 1 697 24 32 0 0 chrX 14692137 14692168 -7730659 + AT_rich Low_complexity Low_complexity 1 31 0 1 697 23 0 0 0 chrX 14692373 14692396 -7730431 + AT_rich Low_complexity Low_complexity 1 23 0 1 697 180 0 0 0 chrX 14692977 14692997 -7729830 + (TCC)n Simple_repeat Simple_repeat 1 20 0 1 697 186 174 0 0 chrX 14696932 14696978 -7725849 + (CAGT)n Simple_repeat Simple_repeat 3 48 0 1 697 232 159 15 60 chrX 14697349 14697416 -7725411 + A-rich Low_complexity Low_complexity 2 65 0 1 697 468 72 0 0 chrX 14698022 14698091 -7724736 + (TAGA)n Simple_repeat Simple_repeat 3 71 0 1 697 221 0 35 0 chrX 14700514 14700543 -7722284 + (GAATG)n Simple_repeat Simple_repeat 4 33 0 1 697 22 0 0 0 chrX 14700901 14700923 -7721904 + AT_rich Low_complexity Low_complexity 1 22 0 1 697 25 51 0 0 chrX 14700957 14700996 -7721831 + AT_rich Low_complexity Low_complexity 1 39 0 1 697 21 36 0 0 chrX 14702818 14702846 -7719981 + AT_rich Low_complexity Low_complexity 1 28 0 1 697 306 0 0 0 chrX 14703332 14703366 -7719461 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 697 231 231 0 0 chrX 14705305 14705357 -7717470 + T-rich Low_complexity Low_complexity 1 52 0 1 697 225 0 0 0 chrX 14705873 14705898 -7716929 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 697 225 0 0 0 chrX 14707434 14707459 -7715368 + (T)n Simple_repeat Simple_repeat 1 25 0 1 697 32 0 0 0 chrX 14708431 14708463 -7714364 + AT_rich Low_complexity Low_complexity 1 32 0 1 697 444 67 0 0 chrX 14709604 14709664 -7713163 + DNAREP1_DM LINE Penelope 2 61 -533 1 697 780 100 0 62 chrX 14709678 14709806 -7713021 + DNAREP1_DM LINE Penelope 359 478 -116 1 697 237 128 0 0 chrX 14709824 14709863 -7712964 + DNAREP1_DM LINE Penelope 556 594 0 1 697 200 135 27 0 chrX 14709904 14709941 -7712886 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1 697 38 39 0 0 chrX 14711719 14711771 -7711056 + AT_rich Low_complexity Low_complexity 1 52 0 1 697 252 0 0 0 chrX 14712065 14712093 -7710734 + (ATG)n Simple_repeat Simple_repeat 1 28 0 1 697 27 0 0 0 chrX 14712324 14712351 -7710476 + AT_rich Low_complexity Low_complexity 1 27 0 1 697 2297 0 0 0 chrX 14712852 14713128 -7709699 - Copia_LTR LTR Copia 0 276 1 1 697 39288 0 0 0 chrX 14713128 14717722 -7705105 - Copia_I LTR Copia 0 4593 1 1 697 2297 0 0 0 chrX 14717722 14717998 -7704829 - Copia_LTR LTR Copia 0 276 1 1 697 224 77 0 25 chrX 14718565 14718605 -7704222 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 1 697 25 105 0 0 chrX 14718607 14718702 -7704125 + AT_rich Low_complexity Low_complexity 1 95 0 1 697 237 65 0 0 chrX 14718908 14718939 -7703888 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 697 204 329 12 12 chrX 14719262 14719342 -7703485 + (CTG)n Simple_repeat Simple_repeat 1 80 0 1 697 249 33 0 0 chrX 14719432 14719462 -7703365 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 697 249 238 0 16 chrX 14719558 14719622 -7703205 + (CAA)n Simple_repeat Simple_repeat 3 65 0 1 697 266 225 0 0 chrX 14719688 14719759 -7703068 + T-rich Low_complexity Low_complexity 1 71 0 1 697 216 0 0 0 chrX 14721736 14721760 -7701067 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 697 255 203 0 0 chrX 14721860 14721929 -7700898 + (TTG)n Simple_repeat Simple_repeat 3 71 0 1 697 372 59 0 0 chrX 14722729 14722780 -7700047 + (TTG)n Simple_repeat Simple_repeat 1 51 0 1 697 223 114 22 22 chrX 14722908 14722953 -7699874 + (TTGG)n Simple_repeat Simple_repeat 4 48 0 1 697 213 65 0 0 chrX 14724037 14724068 -7698759 + (TCC)n Simple_repeat Simple_repeat 1 31 0 1 697 183 162 0 0 chrX 14726688 14726725 -7696102 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 697 204 158 0 0 chrX 14726905 14726943 -7695884 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 697 207 0 0 0 chrX 14729937 14729960 -7692867 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 697 21 57 0 0 chrX 14730523 14730558 -7692269 + AT_rich Low_complexity Low_complexity 1 35 0 1 697 22 70 0 0 chrX 14730682 14730725 -7692102 + AT_rich Low_complexity Low_complexity 1 43 0 1 697 24 0 0 0 chrX 14732812 14732836 -7689991 + AT_rich Low_complexity Low_complexity 1 24 0 1 697 203 255 0 0 chrX 14734024 14734075 -7688752 + CT-rich Low_complexity Low_complexity 2 52 0 1 697 228 67 0 0 chrX 14734075 14734105 -7688722 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 697 31 0 0 0 chrX 14734689 14734720 -7688107 + AT_rich Low_complexity Low_complexity 1 31 0 1 697 261 0 0 0 chrX 14735071 14735100 -7687727 + (CCAA)n Simple_repeat Simple_repeat 3 31 0 1 697 207 0 0 0 chrX 14739864 14739887 -7682940 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 697 28 29 0 0 chrX 14740519 14740554 -7682273 + AT_rich Low_complexity Low_complexity 1 35 0 1 697 21 0 0 0 chrX 14747216 14747237 -7675590 + AT_rich Low_complexity Low_complexity 1 21 0 1 697 225 83 0 0 chrX 14751333 14751369 -7671458 + (T)n Simple_repeat Simple_repeat 1 36 0 1 697 25 65 0 0 chrX 14751604 14751650 -7671177 + AT_rich Low_complexity Low_complexity 1 46 0 1 697 21 0 0 0 chrX 14752944 14752965 -7669862 + AT_rich Low_complexity Low_complexity 1 21 0 1 697 23 0 0 0 chrX 14757032 14757055 -7665772 + AT_rich Low_complexity Low_complexity 1 23 0 1 697 352 306 8 8 chrX 14757943 14758065 -7664762 + (CTG)n Simple_repeat Simple_repeat 3 124 0 1 697 21 0 0 0 chrX 14761165 14761186 -7661641 + AT_rich Low_complexity Low_complexity 1 21 0 1 697 192 152 0 0 chrX 14761350 14761383 -7661444 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 697 198 0 0 0 chrX 14763072 14763094 -7659733 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1 697 192 97 0 0 chrX 14763393 14763424 -7659403 + (CAGT)n Simple_repeat Simple_repeat 4 34 0 1 697 216 204 0 0 chrX 14764604 14764648 -7658179 + A-rich Low_complexity Low_complexity 1 44 0 1 697 34 0 0 0 chrX 14764908 14764942 -7657885 + AT_rich Low_complexity Low_complexity 1 34 0 1 697 23 0 0 0 chrX 14765568 14765591 -7657236 + AT_rich Low_complexity Low_complexity 1 23 0 1 697 213 39 0 0 chrX 14766763 14766789 -7656038 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 697 247 215 74 21 chrX 14766974 14767069 -7655758 + (TTCGG)n Simple_repeat Simple_repeat 3 102 0 1 697 24 0 0 0 chrX 14767175 14767199 -7655628 + AT_rich Low_complexity Low_complexity 1 24 0 1 697 394 230 0 0 chrX 14767643 14767756 -7655071 + (TA)n Simple_repeat Simple_repeat 2 114 0 1 697 288 53 0 0 chrX 14768136 14768174 -7654653 + (CATAC)n Simple_repeat Simple_repeat 2 39 0 1 697 28 29 0 0 chrX 14768915 14768950 -7653877 + AT_rich Low_complexity Low_complexity 1 35 0 1 697 30 0 0 0 chrX 14769137 14769167 -7653660 + AT_rich Low_complexity Low_complexity 1 30 0 1 697 32 26 0 0 chrX 14771361 14771400 -7651427 + AT_rich Low_complexity Low_complexity 1 39 0 1 697 214 162 0 0 chrX 14772076 14772113 -7650714 + (CTG)n Simple_repeat Simple_repeat 1 37 0 1 697 202 244 0 0 chrX 14772322 14772367 -7650460 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1 697 219 173 0 0 chrX 14772483 14772535 -7650292 + (TTG)n Simple_repeat Simple_repeat 1 52 0 1 697 279 193 0 0 chrX 14773769 14773852 -7648975 + T-rich Low_complexity Low_complexity 1 83 0 1 697 22 0 0 0 chrX 14776284 14776306 -7646521 + AT_rich Low_complexity Low_complexity 1 22 0 1 697 21 36 0 0 chrX 14777705 14777733 -7645094 + AT_rich Low_complexity Low_complexity 1 28 0 1 697 24 0 0 0 chrX 14778141 14778165 -7644662 + AT_rich Low_complexity Low_complexity 1 24 0 1 697 424 179 0 0 chrX 14778226 14778310 -7644517 - XDMR_DM Unknown Unknown -271 89 6 1 697 614 204 67 28 chrX 14778236 14778483 -7644344 + SAR_DM Satellite Satellite 614 833 -639 1 697 21 0 0 0 chrX 14779917 14779938 -7642889 + AT_rich Low_complexity Low_complexity 1 21 0 1 697 21 36 0 0 chrX 14780167 14780195 -7642632 + AT_rich Low_complexity Low_complexity 1 28 0 1 697 21 0 0 0 chrX 14780348 14780369 -7642458 + AT_rich Low_complexity Low_complexity 1 21 0 1 697 25 51 0 0 chrX 14781965 14782004 -7640823 + AT_rich Low_complexity Low_complexity 1 39 0 1 697 25 51 0 0 chrX 14785055 14785094 -7637733 + AT_rich Low_complexity Low_complexity 1 39 0 1 697 26 0 0 0 chrX 14785132 14785158 -7637669 + AT_rich Low_complexity Low_complexity 1 26 0 1 697 29 0 0 0 chrX 14785996 14786025 -7636802 + AT_rich Low_complexity Low_complexity 1 29 0 1 697 237 108 0 0 chrX 14786214 14786251 -7636576 + (CATTT)n Simple_repeat Simple_repeat 3 39 0 1 697 200 56 83 0 chrX 14786306 14786342 -7636485 + (CATAC)n Simple_repeat Simple_repeat 5 43 0 1 697 29 28 0 0 chrX 14787706 14787742 -7635085 + AT_rich Low_complexity Low_complexity 1 36 0 1 697 246 198 20 50 chrX 14788028 14788129 -7634698 + (GAATG)n Simple_repeat Simple_repeat 2 99 0 1 697 216 67 0 0 chrX 14788293 14788323 -7634504 + (A)n Simple_repeat Simple_repeat 1 30 0 1 697 213 159 0 22 chrX 14788477 14788522 -7634305 + A-rich Low_complexity Low_complexity 2 45 0 1 697 31 0 0 0 chrX 14789016 14789047 -7633780 + AT_rich Low_complexity Low_complexity 1 31 0 1 697 182 91 30 0 chrX 14789273 14789306 -7633521 + (CAT)n Simple_repeat Simple_repeat 1 34 0 1 697 22 0 0 0 chrX 14791156 14791178 -7631649 + AT_rich Low_complexity Low_complexity 1 22 0 1 697 180 0 0 0 chrX 14795454 14795474 -7627353 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 697 21 57 0 0 chrX 14800287 14800322 -7622505 + AT_rich Low_complexity Low_complexity 1 35 0 1 697 21 0 0 0 chrX 14802333 14802354 -7620473 + AT_rich Low_complexity Low_complexity 1 21 0 1 697 26 0 0 0 chrX 14803695 14803721 -7619106 + AT_rich Low_complexity Low_complexity 1 26 0 1 697 51 58 0 0 chrX 14803754 14803840 -7618987 + AT_rich Low_complexity Low_complexity 1 86 0 1 697 200 59 29 0 chrX 14804095 14804129 -7618698 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 697 31 26 0 0 chrX 14805187 14805225 -7617602 + AT_rich Low_complexity Low_complexity 1 38 0 1 697 28 0 0 0 chrX 14808445 14808473 -7614354 + AT_rich Low_complexity Low_complexity 1 28 0 1 697 993 277 37 43 chrX 14808573 14808669 -7614158 + SAR_DM Satellite Satellite 613 827 -645 1 697 1922 117 8 11 chrX 14808669 14809031 -7613796 - XDMR Unknown Unknown 0 361 1 1 697 2381 89 3 0 chrX 14809031 14809391 -7613436 - XDMR Unknown Unknown 0 361 1 1 697 993 277 37 43 chrX 14809031 14809219 -7613608 + SAR_DM Satellite Satellite 828 1254 -218 1 697 2022 134 8 6 chrX 14809391 14809751 -7613076 - XDMR Unknown Unknown 0 361 1 1 697 1420 269 60 42 chrX 14809619 14809757 -7613070 + SAR_DM Satellite Satellite 224 624 -848 1 697 2126 107 0 0 chrX 14809757 14810094 -7612733 - XDMR Unknown Unknown -22 339 3 1 697 1882 121 6 3 chrX 14810096 14810427 -7612400 - XDMR Unknown Unknown 0 361 30 1 697 1420 269 60 42 chrX 14810427 14810645 -7612182 + SAR_DM Satellite Satellite 625 1267 -205 1 698 31 58 0 0 chrX 14816675 14816727 -7606100 + AT_rich Low_complexity Low_complexity 1 52 0 1 698 201 281 9 37 chrX 14816891 14816998 -7605829 + (TTG)n Simple_repeat Simple_repeat 1 104 0 1 698 203 179 0 0 chrX 14818022 14818061 -7604766 + A-rich Low_complexity Low_complexity 1 39 0 1 698 189 0 0 0 chrX 14818711 14818732 -7604095 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 698 206 95 24 0 chrX 14820440 14820482 -7602345 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 698 462 119 0 0 chrX 14820683 14820767 -7602060 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 698 449 80 13 0 chrX 14826527 14826602 -7596225 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 698 25 31 0 0 chrX 14827093 14827125 -7595702 + AT_rich Low_complexity Low_complexity 1 32 0 1 698 219 176 19 19 chrX 14827736 14827788 -7595039 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 698 23 33 0 0 chrX 14827938 14827968 -7594859 + AT_rich Low_complexity Low_complexity 1 30 0 1 698 3742 2 0 0 chrX 14830947 14831375 -7591452 + ROO_LTR LTR Pao 1 428 0 1 698 65882 0 2 12 chrX 14831375 14839718 -7583109 + ROO_I LTR Pao 1 8256 0 1 698 3742 2 0 0 chrX 14839718 14840146 -7582681 + ROO_LTR LTR Pao 1 428 0 1 698 22 35 0 0 chrX 14840195 14840224 -7582603 + AT_rich Low_complexity Low_complexity 1 29 0 1 698 23 0 0 0 chrX 14840534 14840557 -7582270 + AT_rich Low_complexity Low_complexity 1 23 0 1 698 222 222 0 0 chrX 14841617 14841671 -7581156 + CT-rich Low_complexity Low_complexity 2 55 0 1 698 216 0 0 0 chrX 14843691 14843715 -7579112 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 698 22 0 0 0 chrX 14845061 14845083 -7577744 + AT_rich Low_complexity Low_complexity 1 22 0 1 698 188 86 0 28 chrX 14847764 14847800 -7575027 + (TTTTTA)n Simple_repeat Simple_repeat 3 37 0 1 698 24 0 0 0 chrX 14848135 14848159 -7574668 + AT_rich Low_complexity Low_complexity 1 24 0 1 698 242 95 24 0 chrX 14850060 14850102 -7572725 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 698 200 135 27 0 chrX 14850754 14850791 -7572036 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 698 264 200 17 0 chrX 14850894 14850954 -7571873 - LINEJ1_DM LINE Jockey -13 5007 4947 1 698 213 279 12 12 chrX 14851245 14851325 -7571502 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 698 243 133 0 0 chrX 14851634 14851679 -7571148 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 698 185 0 40 0 chrX 14851811 14851836 -7570991 + (TAAAA)n Simple_repeat Simple_repeat 5 30 0 1 698 30 0 0 0 chrX 14853368 14853398 -7569429 + AT_rich Low_complexity Low_complexity 1 30 0 1 698 21 0 0 0 chrX 14854646 14854667 -7568160 + AT_rich Low_complexity Low_complexity 1 21 0 1 698 213 39 0 0 chrX 14855345 14855371 -7567456 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 698 180 0 0 0 chrX 14855483 14855503 -7567324 + (CAG)n Simple_repeat Simple_repeat 2 21 0 1 698 203 245 0 0 chrX 14855651 14855700 -7567127 + (TTG)n Simple_repeat Simple_repeat 1 49 0 1 698 183 129 0 0 chrX 14857494 14857525 -7565302 + (T)n Simple_repeat Simple_repeat 1 31 0 1 698 24 0 0 0 chrX 14857655 14857679 -7565148 + AT_rich Low_complexity Low_complexity 1 24 0 1 698 21 36 0 0 chrX 14859155 14859183 -7563644 + AT_rich Low_complexity Low_complexity 1 28 0 1 698 189 0 0 0 chrX 14859842 14859863 -7562964 + (T)n Simple_repeat Simple_repeat 1 21 0 1 698 226 264 0 0 chrX 14860475 14860528 -7562299 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 698 210 150 0 0 chrX 14861607 14861647 -7561180 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 698 246 105 0 0 chrX 14862835 14862873 -7559954 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 698 23 0 0 0 chrX 14863299 14863322 -7559505 + AT_rich Low_complexity Low_complexity 1 23 0 1 698 22 0 0 0 chrX 14864889 14864911 -7557916 + AT_rich Low_complexity Low_complexity 1 22 0 1 698 327 127 0 0 chrX 14865255 14865318 -7557509 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 698 240 86 0 0 chrX 14866307 14866342 -7556485 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 698 204 111 0 0 chrX 14868815 14868851 -7553976 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 698 217 246 0 0 chrX 14868954 14869011 -7553816 + T-rich Low_complexity Low_complexity 2 58 0 1 698 222 118 0 0 chrX 14869197 14869231 -7553596 + (CAG)n Simple_repeat Simple_repeat 2 35 0 1 698 219 275 7 61 chrX 14870134 14870281 -7552546 + T-rich Low_complexity Low_complexity 2 140 0 1 698 189 132 0 0 chrX 14870368 14870406 -7552421 + (CTTTG)n Simple_repeat Simple_repeat 3 40 0 1 698 219 114 0 0 chrX 14873075 14873110 -7549717 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 698 180 0 0 0 chrX 14873119 14873139 -7549688 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 698 270 0 0 0 chrX 14874254 14874284 -7548543 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 698 205 283 0 0 chrX 14874498 14874558 -7548269 + T-rich Low_complexity Low_complexity 1 60 0 1 698 198 0 0 0 chrX 14875483 14875505 -7547322 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 698 22 56 0 0 chrX 14877851 14877887 -7544940 + AT_rich Low_complexity Low_complexity 1 36 0 1 698 223 186 0 0 chrX 14878388 14878431 -7544396 + T-rich Low_complexity Low_complexity 1 43 0 1 698 237 228 0 0 chrX 14878528 14878585 -7544242 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 698 254 315 0 0 chrX 14882356 14882445 -7540382 + A-rich Low_complexity Low_complexity 1 89 0 1 698 221 216 20 0 chrX 14883032 14883083 -7539744 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 698 21 0 0 0 chrX 14883860 14883881 -7538946 + AT_rich Low_complexity Low_complexity 1 21 0 1 698 224 250 34 11 chrX 14884093 14884182 -7538645 + (TG)n Simple_repeat Simple_repeat 1 91 0 1 698 21 57 0 0 chrX 14884734 14884769 -7538058 + AT_rich Low_complexity Low_complexity 1 35 0 1 698 201 175 0 0 chrX 14885228 14885268 -7537559 + (CCCCAA)n Simple_repeat Simple_repeat 5 44 0 1 698 28 0 0 0 chrX 14886230 14886258 -7536569 + AT_rich Low_complexity Low_complexity 1 28 0 1 698 211 139 23 0 chrX 14887168 14887211 -7535616 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 698 28 0 0 0 chrX 14887942 14887970 -7534857 + AT_rich Low_complexity Low_complexity 1 28 0 1 698 31 44 0 0 chrX 14889749 14889794 -7533033 + AT_rich Low_complexity Low_complexity 1 45 0 1 698 202 205 0 0 chrX 14893613 14893652 -7529175 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 698 234 143 0 0 chrX 14894883 14894932 -7527895 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 698 28 48 0 0 chrX 14896841 14896883 -7525944 + AT_rich Low_complexity Low_complexity 1 42 0 1 698 242 164 0 18 chrX 14897817 14897873 -7524954 + (CAAT)n Simple_repeat Simple_repeat 1 55 0 1 698 22 35 0 0 chrX 14898626 14898655 -7524172 + GC_rich Low_complexity Low_complexity 1 29 0 1 698 240 149 0 0 chrX 14900210 14900257 -7522570 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 698 255 31 0 0 chrX 14900392 14900424 -7522403 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 698 189 74 0 0 chrX 14900457 14900484 -7522343 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 698 211 135 27 0 chrX 14901504 14901541 -7521286 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 1 698 28 48 0 0 chrX 14901755 14901797 -7521030 + AT_rich Low_complexity Low_complexity 1 42 0 1 698 195 69 0 0 chrX 14901982 14902011 -7520816 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 698 207 167 0 0 chrX 14902486 14902528 -7520299 + (TTCGGG)n Simple_repeat Simple_repeat 3 44 0 1 698 268 273 0 25 chrX 14903490 14903569 -7519258 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 1 698 22 70 0 0 chrX 14904229 14904272 -7518555 + AT_rich Low_complexity Low_complexity 1 43 0 1 698 210 226 0 0 chrX 14909121 14909174 -7513653 + (CTG)n Simple_repeat Simple_repeat 1 53 0 1 698 623 98 260 3 chrX 14912012 14912135 -7510692 + DNAREP1_DM LINE Penelope 445 592 -2 1 698 244 0 0 53 chrX 14913073 14913111 -7509716 + (CATA)n Simple_repeat Simple_repeat 1 36 0 1 698 255 79 0 0 chrX 14913516 14913554 -7509273 + (CATCC)n Simple_repeat Simple_repeat 2 39 0 1 698 23 0 0 0 chrX 14915250 14915273 -7507554 + AT_rich Low_complexity Low_complexity 1 23 0 1 698 26 0 0 0 chrX 14915822 14915848 -7506979 + AT_rich Low_complexity Low_complexity 1 26 0 1 698 237 33 0 0 chrX 14916300 14916330 -7506497 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 698 22 35 0 0 chrX 14916687 14916716 -7506111 + AT_rich Low_complexity Low_complexity 1 29 0 1 698 275 206 16 0 chrX 14917198 14917261 -7505566 + FB4_DM DNA Tc1 1110 1173 -2916 1 698 316 183 113 0 chrX 14917276 14917347 -7505480 + FB4_DM DNA Tc1 2184 2262 -1827 1 698 2159 122 3 11 chrX 14917348 14917703 -7505124 + FB4_DM DNA Tc1 2405 2756 -1333 1 698 219 69 0 0 chrX 14917957 14917986 -7504841 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 698 29 0 0 0 chrX 14918088 14918117 -7504710 + AT_rich Low_complexity Low_complexity 1 29 0 1 698 24 0 0 0 chrX 14919547 14919571 -7503256 + AT_rich Low_complexity Low_complexity 1 24 0 1 698 230 191 64 0 chrX 14920682 14920729 -7502098 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 1 698 192 40 0 0 chrX 14921849 14921874 -7500953 + (A)n Simple_repeat Simple_repeat 1 25 0 1 698 237 65 0 0 chrX 14923154 14923185 -7499642 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 698 219 114 0 0 chrX 14924144 14924179 -7498648 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 698 186 43 0 0 chrX 14924339 14924362 -7498465 + (A)n Simple_repeat Simple_repeat 1 23 0 1 698 35 0 0 0 chrX 14927089 14927124 -7495703 + AT_rich Low_complexity Low_complexity 1 35 0 1 698 191 36 0 35 chrX 14927476 14927505 -7495322 + (TATG)n Simple_repeat Simple_repeat 4 31 0 1 698 3366 3 0 0 chrX 14928179 14928546 -7494281 + ROVER-LTR_DM LTR Gypsy 1 367 0 1 698 56592 3 0 1 chrX 14928546 14935282 -7487545 + ROVER-I_DM LTR Gypsy 1 6584 0 1 698 3373 0 0 0 chrX 14935282 14935648 -7487179 + ROVER-LTR_DM LTR Gypsy 1 366 -1 1 698 198 0 0 0 chrX 14935648 14935670 -7487157 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 698 201 133 0 0 chrX 14937184 14937214 -7485613 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1 698 30 0 0 0 chrX 14939584 14939614 -7483213 + AT_rich Low_complexity Low_complexity 1 30 0 1 698 419 148 8 115 chrX 14942024 14942146 -7480681 - FB4_DM DNA Tc1 -1333 2756 2648 1 87 2396 104 25 10 chrX 14942133 14942643 -7480184 - FB4_DM DNA Tc1 -2356 1733 1101 1 699 290 162 253 13 chrX 14942633 14942708 -7480119 + DNAREP1_DM LINE Penelope 500 592 -2 1 699 198 0 0 0 chrX 14942842 14942864 -7479963 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 699 32 0 0 0 chrX 14945804 14945836 -7476991 + AT_rich Low_complexity Low_complexity 1 32 0 1 699 25 31 0 0 chrX 14956560 14956592 -7466235 + AT_rich Low_complexity Low_complexity 1 32 0 1 699 23 0 0 0 chrX 14965523 14965546 -7457281 + AT_rich Low_complexity Low_complexity 1 23 0 1 699 222 91 0 0 chrX 14965625 14965658 -7457169 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 699 213 278 21 32 chrX 14965799 14965892 -7456935 + (TATG)n Simple_repeat Simple_repeat 2 93 0 1 699 245 224 60 0 chrX 14965818 14965885 -7456942 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 1 699 27 49 0 0 chrX 14966153 14966194 -7456633 + AT_rich Low_complexity Low_complexity 1 41 0 1 699 225 139 0 0 chrX 14966378 14966421 -7456406 + (TGG)n Simple_repeat Simple_repeat 1 43 0 1 699 207 69 0 0 chrX 14967014 14967043 -7455784 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 699 21 0 0 0 chrX 14967667 14967688 -7455139 + AT_rich Low_complexity Low_complexity 1 21 0 1 699 288 77 0 0 chrX 14968599 14968638 -7454189 + (TAA)n Simple_repeat Simple_repeat 1 39 0 1 699 24 0 0 0 chrX 14970538 14970562 -7452265 + AT_rich Low_complexity Low_complexity 1 24 0 1 699 22 35 0 0 chrX 14970615 14970644 -7452183 + AT_rich Low_complexity Low_complexity 1 29 0 1 699 2103 89 11 11 chrX 14970855 14971207 -7451620 + S_DM DNA Tc1 1 352 -1384 1 699 972 106 0 22 chrX 14971214 14971398 -7451429 + S_DM DNA Tc1 1557 1736 0 1 699 230 255 0 0 chrX 14971881 14971932 -7450895 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 1 699 25 0 0 0 chrX 14972946 14972971 -7449856 + AT_rich Low_complexity Low_complexity 1 25 0 1 699 339 167 0 0 chrX 14973154 14973220 -7449607 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 699 206 255 0 0 chrX 14974898 14974945 -7447882 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 1 699 31 58 0 0 chrX 14976585 14976637 -7446190 + AT_rich Low_complexity Low_complexity 1 52 0 1 699 24 32 0 0 chrX 14979937 14979968 -7442859 + AT_rich Low_complexity Low_complexity 1 31 0 1 699 195 42 0 0 chrX 14980141 14980165 -7442662 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 699 25 31 0 0 chrX 14980595 14980627 -7442200 + AT_rich Low_complexity Low_complexity 1 32 0 1 699 209 244 0 0 chrX 14983136 14983177 -7439650 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 699 351 60 0 0 chrX 14990815 14990865 -7431962 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 699 22 35 0 0 chrX 14993201 14993230 -7429597 + AT_rich Low_complexity Low_complexity 1 29 0 1 699 198 103 0 0 chrX 14995330 14995359 -7427468 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 699 270 223 0 60 chrX 14997752 14997852 -7424975 + (TTTCG)n Simple_repeat Simple_repeat 1 94 0 1 699 228 216 0 0 chrX 14998302 14998353 -7424474 + CT-rich Low_complexity Low_complexity 2 52 0 1 699 22 0 0 0 chrX 14999212 14999234 -7423593 + AT_rich Low_complexity Low_complexity 1 22 0 1 699 288 70 0 0 chrX 14999560 14999603 -7423224 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 699 203 182 0 22 chrX 15000294 15000339 -7422488 + (CCGAA)n Simple_repeat Simple_repeat 2 45 0 1 699 243 193 0 17 chrX 15000371 15000429 -7422398 + A-rich Low_complexity Low_complexity 4 60 0 1 699 267 114 0 0 chrX 15000972 15001016 -7421811 + (TTGG)n Simple_repeat Simple_repeat 1 44 0 1 699 270 266 0 0 chrX 15001557 15001621 -7421206 + (TTCCG)n Simple_repeat Simple_repeat 4 67 0 1 699 201 39 0 0 chrX 15002270 15002296 -7420531 + (A)n Simple_repeat Simple_repeat 1 26 0 1 699 32 75 0 0 chrX 15002869 15002936 -7419891 + AT_rich Low_complexity Low_complexity 1 67 0 1 699 210 150 0 0 chrX 15003568 15003608 -7419219 + (TTTCG)n Simple_repeat Simple_repeat 2 41 0 1 699 321 131 0 0 chrX 15005211 15005272 -7417555 + (CAG)n Simple_repeat Simple_repeat 1 61 0 1 699 202 243 0 39 chrX 15006099 15006176 -7416651 + (CGG)n Simple_repeat Simple_repeat 2 75 0 1 699 228 67 0 0 chrX 15006930 15006960 -7415867 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 699 219 139 0 0 chrX 15007110 15007146 -7415681 + (CATA)n Simple_repeat Simple_repeat 2 37 0 1 699 186 71 0 0 chrX 15007332 15007360 -7415467 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 699 192 216 0 0 chrX 15007578 15007629 -7415198 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 699 211 229 0 0 chrX 15007693 15007741 -7415086 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 699 22 0 0 0 chrX 15008356 15008378 -7414449 + AT_rich Low_complexity Low_complexity 1 22 0 1 699 23 33 0 0 chrX 15011962 15011992 -7410835 + AT_rich Low_complexity Low_complexity 1 30 0 1 699 23 0 0 0 chrX 15015373 15015396 -7407431 + AT_rich Low_complexity Low_complexity 1 23 0 1 699 21 57 0 0 chrX 15015471 15015506 -7407321 + AT_rich Low_complexity Low_complexity 1 35 0 1 699 41 21 0 0 chrX 15016015 15016063 -7406764 + AT_rich Low_complexity Low_complexity 1 48 0 1 699 218 208 0 19 chrX 15016193 15016247 -7406580 + (CAT)n Simple_repeat Simple_repeat 1 53 0 1 699 228 224 0 0 chrX 15017277 15017326 -7405501 + (CAGT)n Simple_repeat Simple_repeat 2 50 0 1 699 26 74 0 0 chrX 15017673 15017727 -7405100 + AT_rich Low_complexity Low_complexity 1 54 0 1 699 30 83 0 0 chrX 15017782 15017854 -7404973 + AT_rich Low_complexity Low_complexity 1 72 0 1 699 216 0 0 0 chrX 15018560 15018584 -7404243 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 699 221 238 0 16 chrX 15019565 15019629 -7403198 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 699 28 0 0 0 chrX 15021703 15021731 -7401096 + AT_rich Low_complexity Low_complexity 1 28 0 1 699 210 158 0 0 chrX 15021900 15021938 -7400889 + T-rich Low_complexity Low_complexity 1 38 0 1 699 459 73 0 0 chrX 15022074 15022142 -7400685 + (TCCA)n Simple_repeat Simple_repeat 4 71 0 1 699 207 0 0 0 chrX 15024200 15024223 -7398604 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 699 28 48 0 0 chrX 15024815 15024857 -7397970 + AT_rich Low_complexity Low_complexity 1 42 0 1 699 189 0 0 0 chrX 15026441 15026462 -7396365 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 699 27 49 0 0 chrX 15027735 15027776 -7395051 + AT_rich Low_complexity Low_complexity 1 41 0 1 699 23 0 0 0 chrX 15028261 15028284 -7394543 + AT_rich Low_complexity Low_complexity 1 23 0 1 699 28 0 0 0 chrX 15031310 15031338 -7391489 + AT_rich Low_complexity Low_complexity 1 28 0 1 699 25 65 0 0 chrX 15033971 15034017 -7388810 + AT_rich Low_complexity Low_complexity 1 46 0 1 699 296 293 0 26 chrX 15035165 15035242 -7387585 + (CCCGAA)n Simple_repeat Simple_repeat 3 77 0 1 699 216 135 0 0 chrX 15035331 15035368 -7387459 + (CCA)n Simple_repeat Simple_repeat 3 39 0 1 699 28 0 0 0 chrX 15035814 15035842 -7386985 + AT_rich Low_complexity Low_complexity 1 28 0 1 699 258 278 0 20 chrX 15036171 15036270 -7386557 + (CAGAGA)n Simple_repeat Simple_repeat 6 102 0 1 699 180 0 0 0 chrX 15036289 15036309 -7386518 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 699 285 29 0 0 chrX 15036340 15036374 -7386453 + (ATTG)n Simple_repeat Simple_repeat 3 36 0 1 699 184 147 39 26 chrX 15036465 15036542 -7386285 + (ATTG)n Simple_repeat Simple_repeat 2 79 0 1 699 21 36 0 0 chrX 15036591 15036619 -7386208 + AT_rich Low_complexity Low_complexity 1 28 0 1 699 201 39 0 0 chrX 15037176 15037202 -7385625 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 699 324 0 0 0 chrX 15037630 15037666 -7385161 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 699 26 0 0 0 chrX 15038127 15038153 -7384674 + AT_rich Low_complexity Low_complexity 1 26 0 1 699 294 309 7 32 chrX 15040591 15040745 -7382082 + SAR_DM Satellite Satellite 574 723 -749 1 699 204 158 0 0 chrX 15041085 15041123 -7381704 + (CAGTT)n Simple_repeat Simple_repeat 3 40 0 1 699 241 322 0 0 chrX 15041337 15041396 -7381431 + G-rich Low_complexity Low_complexity 2 60 0 1 699 204 167 24 0 chrX 15042883 15042925 -7379902 + T-rich Low_complexity Low_complexity 3 45 0 1 699 180 111 0 0 chrX 15044178 15044205 -7378622 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 699 31 44 0 0 chrX 15045363 15045408 -7377419 + AT_rich Low_complexity Low_complexity 1 45 0 1 699 444 151 14 0 chrX 15046303 15046376 -7376451 + DNAREP1_DM LINE Penelope 521 594 0 1 699 336 24 0 0 chrX 15047216 15047257 -7375570 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 699 24 0 0 0 chrX 15047535 15047559 -7375268 + AT_rich Low_complexity Low_complexity 1 24 0 1 699 23 78 0 0 chrX 15047812 15047863 -7374964 + AT_rich Low_complexity Low_complexity 1 51 0 1 699 226 167 0 20 chrX 15049010 15049059 -7373768 + T-rich Low_complexity Low_complexity 1 48 0 1 699 228 200 16 48 chrX 15050681 15050744 -7372083 + ROO_I LTR Pao 636 696 -7560 1 699 272 167 0 0 chrX 15051602 15051656 -7371171 - ROO_I LTR Pao -7522 734 681 1 699 225 0 0 0 chrX 15052469 15052494 -7370333 + (T)n Simple_repeat Simple_repeat 1 25 0 1 699 189 74 0 0 chrX 15053002 15053029 -7369798 + (T)n Simple_repeat Simple_repeat 1 27 0 1 699 213 238 63 0 chrX 15054370 15054433 -7368394 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 1 699 39 22 0 0 chrX 15056720 15056766 -7366061 + AT_rich Low_complexity Low_complexity 1 46 0 1 699 198 0 0 0 chrX 15057128 15057150 -7365677 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 699 25 83 0 0 chrX 15059946 15060006 -7362821 + AT_rich Low_complexity Low_complexity 1 60 0 1 699 36 0 0 0 chrX 15060118 15060154 -7362673 + AT_rich Low_complexity Low_complexity 1 36 0 1 699 214 115 0 71 chrX 15060815 15060871 -7361956 + (CCA)n Simple_repeat Simple_repeat 2 53 0 1 699 269 268 14 0 chrX 15061438 15061509 -7361318 + GA-rich Low_complexity Low_complexity 1 72 0 1 699 230 167 21 0 chrX 15062208 15062256 -7360571 + (CCA)n Simple_repeat Simple_repeat 2 50 0 1 699 35 63 0 0 chrX 15062701 15062764 -7360063 + AT_rich Low_complexity Low_complexity 1 63 0 1 699 21 0 0 0 chrX 15062814 15062835 -7359992 + AT_rich Low_complexity Low_complexity 1 21 0 1 699 29 28 0 0 chrX 15063359 15063395 -7359432 + AT_rich Low_complexity Low_complexity 1 36 0 1 699 21 0 0 0 chrX 15064053 15064074 -7358753 + AT_rich Low_complexity Low_complexity 1 21 0 1 699 216 0 0 0 chrX 15066548 15066572 -7356255 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 699 26 30 0 0 chrX 15068106 15068139 -7354688 + AT_rich Low_complexity Low_complexity 1 33 0 1 699 245 291 0 0 chrX 15072029 15072108 -7350719 + ROO_I LTR Pao 651 729 -7527 1 699 228 211 0 0 chrX 15072123 15072194 -7350633 + (ATG)n Simple_repeat Simple_repeat 3 73 0 1 699 234 158 70 0 chrX 15072286 15072343 -7350484 + ROO_I LTR Pao 676 736 -7520 1 699 259 65 21 21 chrX 15072774 15072821 -7350006 + (CCA)n Simple_repeat Simple_repeat 2 48 0 1 700 206 209 0 0 chrX 15074585 15074628 -7348199 + (CAG)n Simple_repeat Simple_repeat 1 43 0 1 700 233 98 24 0 chrX 15077015 15077056 -7345771 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 700 28 29 0 0 chrX 15082024 15082059 -7340768 + AT_rich Low_complexity Low_complexity 1 35 0 1 700 235 228 38 0 chrX 15082199 15082278 -7340549 + A-rich Low_complexity Low_complexity 5 86 0 1 700 249 108 0 0 chrX 15083719 15083756 -7339071 + (CGAAA)n Simple_repeat Simple_repeat 3 39 0 1 700 21 36 0 0 chrX 15084579 15084607 -7338220 + AT_rich Low_complexity Low_complexity 1 28 0 1 700 25 31 0 0 chrX 15086029 15086061 -7336766 + AT_rich Low_complexity Low_complexity 1 32 0 1 700 189 94 0 0 chrX 15086929 15086961 -7335866 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 1 700 205 228 17 17 chrX 15089114 15089172 -7333655 + (TTG)n Simple_repeat Simple_repeat 2 59 0 1 700 212 244 0 0 chrX 15089270 15089315 -7333512 + (CATA)n Simple_repeat Simple_repeat 3 47 0 1 700 287 256 0 0 chrX 15090865 15090947 -7331880 + (TATATG)n Simple_repeat Simple_repeat 1 82 0 1 700 40 0 0 0 chrX 15091222 15091262 -7331565 + AT_rich Low_complexity Low_complexity 1 40 0 1 700 25 0 0 0 chrX 15091450 15091475 -7331352 + AT_rich Low_complexity Low_complexity 1 25 0 1 700 219 133 0 0 chrX 15095225 15095270 -7327557 + (T)n Simple_repeat Simple_repeat 1 45 0 1 700 189 147 0 0 chrX 15095984 15096018 -7326809 + (A)n Simple_repeat Simple_repeat 1 34 0 1 700 22 70 0 0 chrX 15096166 15096209 -7326618 + AT_rich Low_complexity Low_complexity 1 43 0 1 700 21 0 0 0 chrX 15096949 15096970 -7325857 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 240 140 120 0 chrX 15097079 15097129 -7325698 + XDMR Unknown Unknown 1 56 -305 1 700 232 207 17 33 chrX 15097101 15097161 -7325666 - SAR_DM Satellite Satellite -451 1021 963 1 700 247 179 36 0 chrX 15097618 15097674 -7325153 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 700 21 82 0 0 chrX 15099238 15099287 -7323540 + AT_rich Low_complexity Low_complexity 1 49 0 1 700 22 0 0 0 chrX 15101453 15101475 -7321352 + AT_rich Low_complexity Low_complexity 1 22 0 1 700 26 0 0 0 chrX 15102090 15102116 -7320711 + AT_rich Low_complexity Low_complexity 1 26 0 1 700 32 0 0 0 chrX 15103276 15103308 -7319519 + AT_rich Low_complexity Low_complexity 1 32 0 1 700 28 0 0 0 chrX 15106550 15106578 -7316249 + AT_rich Low_complexity Low_complexity 1 28 0 1 700 21 71 0 0 chrX 15108792 15108834 -7313993 + AT_rich Low_complexity Low_complexity 1 42 0 1 700 22 0 0 0 chrX 15108873 15108895 -7313932 + AT_rich Low_complexity Low_complexity 1 22 0 1 700 205 250 33 0 chrX 15110048 15110108 -7312719 + (CCAA)n Simple_repeat Simple_repeat 3 64 0 1 700 23 0 0 0 chrX 15110221 15110244 -7312583 + AT_rich Low_complexity Low_complexity 1 23 0 1 700 195 170 0 0 chrX 15113478 15113525 -7309302 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 700 2301 81 24 0 chrX 15115319 15115654 -7307173 + XDMR Unknown Unknown 19 361 0 1 700 1835 265 40 38 chrX 15115322 15115654 -7307173 - SAR_DM Satellite Satellite -421 1051 491 1 700 2732 67 0 0 chrX 15115654 15116015 -7306812 + XDMR Unknown Unknown 1 361 0 1 700 1835 265 40 38 chrX 15116015 15116203 -7306624 - SAR_DM Satellite Satellite -421 490 169 1 700 295 238 70 54 chrX 15116232 15116361 -7306466 + XDMR_DM Unknown Unknown 220 350 -10 1 700 180 0 0 0 chrX 15118543 15118563 -7304264 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 700 22 88 0 0 chrX 15120326 15120383 -7302444 + AT_rich Low_complexity Low_complexity 1 57 0 1 700 21 57 0 0 chrX 15120465 15120500 -7302327 + AT_rich Low_complexity Low_complexity 1 35 0 1 700 34 0 0 0 chrX 15120998 15121032 -7301795 + AT_rich Low_complexity Low_complexity 1 34 0 1 700 29 60 0 0 chrX 15121465 15121515 -7301312 + AT_rich Low_complexity Low_complexity 1 50 0 1 700 270 167 0 0 chrX 15121940 15122000 -7300827 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 700 278 250 0 0 chrX 15128654 15128722 -7294105 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 700 216 0 0 0 chrX 15128882 15128906 -7293921 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 700 21 0 0 0 chrX 15131452 15131473 -7291354 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 228 122 0 0 chrX 15133070 15133111 -7289716 + (CACCAT)n Simple_repeat Simple_repeat 6 46 0 1 700 228 343 0 0 chrX 15135893 15135963 -7286864 + (CTGGGG)n Simple_repeat Simple_repeat 2 71 0 1 700 47 19 0 0 chrX 15136462 15136516 -7286311 + AT_rich Low_complexity Low_complexity 1 54 0 1 700 28 71 0 0 chrX 15137798 15137854 -7284973 + AT_rich Low_complexity Low_complexity 1 56 0 1 700 21 0 0 0 chrX 15138923 15138944 -7283883 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 231 204 0 0 chrX 15139993 15140042 -7282785 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 700 208 244 0 0 chrX 15140139 15140184 -7282643 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 700 210 171 0 0 chrX 15140249 15140284 -7282543 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 700 21 0 0 0 chrX 15141427 15141448 -7281379 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 270 95 0 0 chrX 15141507 15141549 -7281278 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 700 351 141 0 0 chrX 15142037 15142101 -7280726 + (GTATG)n Simple_repeat Simple_repeat 4 67 0 1 700 34 0 0 0 chrX 15142489 15142523 -7280304 + AT_rich Low_complexity Low_complexity 1 34 0 1 700 231 36 0 0 chrX 15144296 15144324 -7278503 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1 700 186 133 0 0 chrX 15147643 15147673 -7275154 + (ATGGTG)n Simple_repeat Simple_repeat 5 34 0 1 700 210 118 0 0 chrX 15148674 15148708 -7274119 + (AACTG)n Simple_repeat Simple_repeat 5 38 0 1 700 21 57 0 0 chrX 15149144 15149179 -7273648 + AT_rich Low_complexity Low_complexity 1 35 0 1 700 198 91 0 0 chrX 15149628 15149661 -7273166 + (GAAAA)n Simple_repeat Simple_repeat 4 36 0 1 700 200 182 0 0 chrX 15151596 15151629 -7271198 + (CGAAA)n Simple_repeat Simple_repeat 3 35 0 1 700 183 80 0 0 chrX 15151816 15151841 -7270986 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 700 234 62 0 0 chrX 15151997 15152029 -7270798 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 700 264 30 0 0 chrX 15153523 15153556 -7269271 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 700 300 53 0 0 chrX 15156047 15156085 -7266742 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 700 294 148 0 0 chrX 15156267 15156321 -7266506 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 700 24 0 0 0 chrX 15156649 15156673 -7266154 + AT_rich Low_complexity Low_complexity 1 24 0 1 700 271 253 0 0 chrX 15159922 15160001 -7262826 + (CTG)n Simple_repeat Simple_repeat 1 79 0 1 700 21 36 0 0 chrX 15160424 15160452 -7262375 + AT_rich Low_complexity Low_complexity 1 28 0 1 700 206 211 0 0 chrX 15164400 15164438 -7258389 + (CAGC)n Simple_repeat Simple_repeat 4 41 0 1 700 306 73 0 0 chrX 15164553 15164594 -7258233 + (CCAA)n Simple_repeat Simple_repeat 3 43 0 1 700 31 0 0 0 chrX 15165070 15165101 -7257726 + AT_rich Low_complexity Low_complexity 1 31 0 1 700 389 406 0 0 chrX 15165636 15165816 -7257011 + (CCG)n Simple_repeat Simple_repeat 1 180 0 1 700 9520 23 1 3 chrX 15167793 15168900 -7253927 - PROTOP_A DNA P 0 1105 1 1 700 189 0 0 0 chrX 15169811 15169832 -7252995 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 700 247 302 12 0 chrX 15170022 15170108 -7252719 + A-rich Low_complexity Low_complexity 2 88 0 1 700 227 103 26 0 chrX 15170479 15170518 -7252309 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 700 23 0 0 0 chrX 15173243 15173266 -7249561 + AT_rich Low_complexity Low_complexity 1 23 0 1 700 219 125 0 0 chrX 15174025 15174065 -7248762 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 700 22 35 0 0 chrX 15175883 15175912 -7246915 + AT_rich Low_complexity Low_complexity 1 29 0 1 700 21 0 0 0 chrX 15176206 15176227 -7246600 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 204 40 0 0 chrX 15177038 15177063 -7245764 + (CATA)n Simple_repeat Simple_repeat 2 26 0 1 700 229 267 0 7 chrX 15178742 15178888 -7243939 + (TG)n Simple_repeat Simple_repeat 1 144 0 1 700 186 103 0 0 chrX 15180353 15180382 -7242445 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 700 195 100 0 0 chrX 15181343 15181373 -7241454 + (CGAAA)n Simple_repeat Simple_repeat 3 32 0 1 700 180 111 0 0 chrX 15183612 15183639 -7239188 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 1 700 255 133 0 0 chrX 15183767 15183812 -7239015 + (A)n Simple_repeat Simple_repeat 1 45 0 1 700 26 30 0 0 chrX 15186161 15186194 -7236633 + AT_rich Low_complexity Low_complexity 1 33 0 1 700 375 60 0 0 chrX 15186513 15186563 -7236264 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 700 24 32 0 0 chrX 15191232 15191263 -7231564 + AT_rich Low_complexity Low_complexity 1 31 0 1 700 208 298 0 0 chrX 15191722 15191769 -7231058 + (TCCG)n Simple_repeat Simple_repeat 1 47 0 1 700 271 65 43 0 chrX 15192014 15192060 -7230767 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 700 21 0 0 0 chrX 15192531 15192552 -7230275 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 31 0 0 0 chrX 15193163 15193194 -7229633 + AT_rich Low_complexity Low_complexity 1 31 0 1 700 218 233 0 16 chrX 15193403 15193464 -7229363 + A-rich Low_complexity Low_complexity 6 65 0 1 700 258 256 22 65 chrX 15194741 15194854 -7227973 + T-rich Low_complexity Low_complexity 72 179 0 1 700 297 89 0 0 chrX 15194854 15194899 -7227928 + (ATG)n Simple_repeat Simple_repeat 2 46 0 1 700 258 256 22 65 chrX 15194899 15194969 -7227858 + T-rich Low_complexity Low_complexity 4 71 0 1 700 21 0 0 0 chrX 15195070 15195091 -7227736 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 23 0 0 0 chrX 15197560 15197583 -7225244 + AT_rich Low_complexity Low_complexity 1 23 0 1 700 34 24 0 0 chrX 15197867 15197908 -7224919 + AT_rich Low_complexity Low_complexity 1 41 0 1 700 195 100 0 0 chrX 15198541 15198571 -7224256 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 700 183 100 0 0 chrX 15198692 15198722 -7224105 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 700 27 49 0 0 chrX 15199631 15199672 -7223155 + AT_rich Low_complexity Low_complexity 1 41 0 1 700 202 118 0 29 chrX 15200381 15200416 -7222411 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 1 700 227 255 0 0 chrX 15200526 15200577 -7222250 + GA-rich Low_complexity Low_complexity 1 51 0 1 700 34 42 0 0 chrX 15203227 15203275 -7219552 + AT_rich Low_complexity Low_complexity 1 48 0 1 700 26 30 0 0 chrX 15203307 15203340 -7219487 + AT_rich Low_complexity Low_complexity 1 33 0 1 700 251 114 23 0 chrX 15203672 15203716 -7219111 + (CATA)n Simple_repeat Simple_repeat 4 48 0 1 701 187 79 0 50 chrX 15206363 15206403 -7216424 + (CAATT)n Simple_repeat Simple_repeat 2 39 0 1 701 29 28 0 0 chrX 15206475 15206511 -7216316 + AT_rich Low_complexity Low_complexity 1 36 0 1 701 366 156 0 0 chrX 15206788 15206852 -7215975 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 701 31 26 0 0 chrX 15207420 15207458 -7215369 + AT_rich Low_complexity Low_complexity 1 38 0 1 701 22 56 0 0 chrX 15207516 15207552 -7215275 + AT_rich Low_complexity Low_complexity 1 36 0 1 701 242 232 0 0 chrX 15207605 15207661 -7215166 + T-rich Low_complexity Low_complexity 1 56 0 1 701 189 175 0 0 chrX 15208441 15208481 -7214346 + (TATG)n Simple_repeat Simple_repeat 3 42 0 1 701 22 70 0 0 chrX 15208737 15208780 -7214047 + AT_rich Low_complexity Low_complexity 1 43 0 1 701 21 0 0 0 chrX 15209329 15209350 -7213477 + AT_rich Low_complexity Low_complexity 1 21 0 1 701 193 197 15 15 chrX 15210780 15210847 -7211980 + (CGA)n Simple_repeat Simple_repeat 3 69 0 1 701 309 51 0 0 chrX 15212087 15212126 -7210701 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 701 204 67 0 0 chrX 15212947 15212977 -7209850 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 701 22 35 0 0 chrX 15213041 15213070 -7209757 + AT_rich Low_complexity Low_complexity 1 29 0 1 701 204 86 0 54 chrX 15213754 15213791 -7209036 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 1 701 201 74 0 0 chrX 15214438 15214465 -7208362 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 701 234 0 0 0 chrX 15215278 15215304 -7207523 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 701 180 158 0 0 chrX 15215423 15215461 -7207366 + (ATTCG)n Simple_repeat Simple_repeat 1 38 0 1 701 212 189 19 19 chrX 15216588 15216642 -7206185 + (CGA)n Simple_repeat Simple_repeat 3 56 0 1 701 668 136 25 0 chrX 15220526 15220688 -7202139 + (TA)n Simple_repeat Simple_repeat 2 167 0 1 701 1532 25 0 5 chrX 15220772 15220969 -7201858 + I_DM LINE I 5284 5479 -752 1 701 230 222 0 0 chrX 15221667 15221712 -7201115 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 701 183 42 0 0 chrX 15221848 15221872 -7200955 + (CCCCG)n Simple_repeat Simple_repeat 4 27 0 1 701 27 29 0 0 chrX 15222027 15222061 -7200766 + AT_rich Low_complexity Low_complexity 1 34 0 1 701 223 174 0 0 chrX 15227389 15227435 -7195392 + CT-rich Low_complexity Low_complexity 1 46 0 1 701 182 208 0 19 chrX 15229111 15229165 -7193662 + (CGG)n Simple_repeat Simple_repeat 2 54 0 1 701 204 97 0 0 chrX 15234733 15234764 -7188063 + (TTC)n Simple_repeat Simple_repeat 3 33 0 1 701 27 0 0 0 chrX 15236270 15236297 -7186530 + AT_rich Low_complexity Low_complexity 1 27 0 1 701 201 255 0 0 chrX 15237228 15237275 -7185552 + CT-rich Low_complexity Low_complexity 3 49 0 1 701 25 51 0 0 chrX 15238781 15238820 -7184007 + AT_rich Low_complexity Low_complexity 1 39 0 1 701 217 263 0 0 chrX 15239528 15239604 -7183223 + GA-rich Low_complexity Low_complexity 1 76 0 1 701 251 265 0 0 chrX 15240194 15240262 -7182565 + GA-rich Low_complexity Low_complexity 2 69 0 1 701 295 314 0 0 chrX 15242948 15243072 -7179755 + (CGG)n Simple_repeat Simple_repeat 1 124 0 1 701 21 36 0 0 chrX 15244445 15244473 -7178354 + AT_rich Low_complexity Low_complexity 1 28 0 1 701 189 0 0 0 chrX 15244610 15244631 -7178196 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 1 701 324 102 0 0 chrX 15244740 15244789 -7178038 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 701 43 76 0 0 chrX 15244851 15244943 -7177884 + AT_rich Low_complexity Low_complexity 1 92 0 1 701 195 69 0 0 chrX 15245176 15245205 -7177622 + (T)n Simple_repeat Simple_repeat 1 29 0 1 701 183 42 0 0 chrX 15245403 15245427 -7177400 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 701 237 128 0 0 chrX 15245793 15245840 -7176987 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 701 24 32 0 0 chrX 15246119 15246150 -7176677 + AT_rich Low_complexity Low_complexity 1 31 0 1 701 261 109 0 0 chrX 15246567 15246613 -7176214 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 701 303 130 0 0 chrX 15246832 15246886 -7175941 + (TGG)n Simple_repeat Simple_repeat 3 56 0 1 701 191 244 0 34 chrX 15247036 15247125 -7175702 + (CCG)n Simple_repeat Simple_repeat 1 86 0 1 701 32 57 0 0 chrX 15247704 15247757 -7175070 + AT_rich Low_complexity Low_complexity 1 53 0 1 701 186 43 0 0 chrX 15250036 15250059 -7172768 + (GGCTG)n Simple_repeat Simple_repeat 4 26 0 1 701 180 125 0 0 chrX 15250286 15250318 -7172509 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 701 420 153 0 0 chrX 15250687 15250772 -7172055 + GA-rich Low_complexity Low_complexity 1 85 0 1 701 27 0 0 0 chrX 15251255 15251282 -7171545 + AT_rich Low_complexity Low_complexity 1 27 0 1 701 27 29 0 0 chrX 15251397 15251431 -7171396 + AT_rich Low_complexity Low_complexity 1 34 0 1 701 26 82 0 0 chrX 15251483 15251544 -7171283 + AT_rich Low_complexity Low_complexity 1 61 0 1 701 240 149 0 0 chrX 15251701 15251748 -7171079 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 701 201 278 0 0 chrX 15251926 15251980 -7170847 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 701 32 75 0 0 chrX 15252305 15252372 -7170455 + AT_rich Low_complexity Low_complexity 1 67 0 1 701 23 0 0 0 chrX 15255054 15255077 -7167750 + AT_rich Low_complexity Low_complexity 1 23 0 1 701 21 0 0 0 chrX 15255225 15255246 -7167581 + AT_rich Low_complexity Low_complexity 1 21 0 1 701 205 196 17 35 chrX 15255637 15255695 -7167132 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 701 27 0 0 0 chrX 15256647 15256674 -7166153 + AT_rich Low_complexity Low_complexity 1 27 0 1 701 23 78 0 0 chrX 15256962 15257013 -7165814 + AT_rich Low_complexity Low_complexity 1 51 0 1 701 30 0 0 0 chrX 15257764 15257794 -7165033 + AT_rich Low_complexity Low_complexity 1 30 0 1 701 216 0 0 0 chrX 15264931 15264955 -7157872 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 701 231 152 22 0 chrX 15265879 15265925 -7156902 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 701 267 175 0 0 chrX 15266561 15266618 -7156209 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 701 21 36 0 0 chrX 15267031 15267059 -7155768 + AT_rich Low_complexity Low_complexity 1 28 0 1 701 213 39 0 0 chrX 15268326 15268352 -7154475 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 701 203 125 0 24 chrX 15268552 15268593 -7154234 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 701 21 0 0 0 chrX 15269007 15269028 -7153799 + AT_rich Low_complexity Low_complexity 1 21 0 1 701 186 71 0 0 chrX 15269396 15269424 -7153403 + (A)n Simple_repeat Simple_repeat 1 28 0 1 701 27 29 0 0 chrX 15270282 15270316 -7152511 + AT_rich Low_complexity Low_complexity 1 34 0 1 701 27 49 0 0 chrX 15271838 15271879 -7150948 + AT_rich Low_complexity Low_complexity 1 41 0 1 701 41 72 0 0 chrX 15274085 15274168 -7148659 + AT_rich Low_complexity Low_complexity 1 83 0 1 701 37 62 0 0 chrX 15274295 15274360 -7148467 + AT_rich Low_complexity Low_complexity 1 65 0 1 701 225 0 0 0 chrX 15275115 15275140 -7147687 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 701 257 155 0 17 chrX 15277652 15277711 -7145116 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 701 276 143 0 0 chrX 15279476 15279532 -7143295 + (CAG)n Simple_repeat Simple_repeat 1 56 0 1 701 24 32 0 0 chrX 15280820 15280851 -7141976 + AT_rich Low_complexity Low_complexity 1 31 0 1 701 218 206 14 0 chrX 15282504 15282577 -7140250 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 701 252 86 0 0 chrX 15283319 15283354 -7139473 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 701 192 77 0 0 chrX 15285446 15285472 -7137355 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 701 21 0 0 0 chrX 15285493 15285514 -7137313 + AT_rich Low_complexity Low_complexity 1 21 0 1 701 241 273 0 0 chrX 15287159 15287214 -7135613 + C-rich Low_complexity Low_complexity 5 59 0 1 701 212 167 0 0 chrX 15287822 15287858 -7134969 + (ATGGTG)n Simple_repeat Simple_repeat 4 39 0 1 701 229 204 0 0 chrX 15288961 15289015 -7133812 + T-rich Low_complexity Low_complexity 1 54 0 1 701 21 36 0 0 chrX 15292154 15292182 -7130645 + AT_rich Low_complexity Low_complexity 1 28 0 1 701 28 71 0 0 chrX 15292704 15292760 -7130067 + AT_rich Low_complexity Low_complexity 1 56 0 1 701 216 204 0 20 chrX 15294231 15294281 -7128546 + A-rich Low_complexity Low_complexity 2 50 0 1 701 189 0 0 0 chrX 15295064 15295085 -7127742 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1 701 182 65 65 0 chrX 15295398 15295429 -7127398 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 1 701 216 167 0 0 chrX 15295498 15295546 -7127281 + (CAAAT)n Simple_repeat Simple_repeat 2 49 0 1 701 220 217 17 0 chrX 15295636 15295696 -7127131 + GA-rich Low_complexity Low_complexity 2 62 0 1 701 204 40 0 0 chrX 15296626 15296651 -7126176 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 701 258 243 9 28 chrX 15296773 15296879 -7125948 + T-rich Low_complexity Low_complexity 4 107 0 1 701 220 250 0 0 chrX 15297045 15297101 -7125726 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 701 219 203 0 0 chrX 15297379 15297443 -7125384 + (CAT)n Simple_repeat Simple_repeat 2 65 0 1 701 207 0 0 0 chrX 15297523 15297546 -7125281 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 701 216 161 0 75 chrX 15297686 15297753 -7125074 + T-rich Low_complexity Low_complexity 4 65 0 1 701 189 0 0 0 chrX 15297852 15297873 -7124954 + (CAGAGA)n Simple_repeat Simple_repeat 4 24 0 1 701 27 0 0 0 chrX 15298228 15298255 -7124572 + AT_rich Low_complexity Low_complexity 1 27 0 1 701 251 207 0 0 chrX 15298505 15298563 -7124264 + (ATTCG)n Simple_repeat Simple_repeat 1 58 0 1 701 215 296 0 0 chrX 15298677 15298731 -7124096 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 701 225 146 0 0 chrX 15300570 15300618 -7122209 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 701 228 210 0 0 chrX 15300753 15300834 -7121993 + (TG)n Simple_repeat Simple_repeat 2 82 0 1 701 211 200 0 0 chrX 15301411 15301456 -7121371 + GA-rich Low_complexity Low_complexity 2 46 0 1 701 23 54 0 0 chrX 15301954 15301991 -7120836 + AT_rich Low_complexity Low_complexity 1 37 0 1 701 805 98 48 16 chrX 15302807 15302931 -7119896 - DNAREP1_DM LINE Penelope -466 128 1 1 701 198 0 0 0 chrX 15303447 15303469 -7119358 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 701 218 196 0 0 chrX 15303564 15303610 -7119217 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 701 21 36 0 0 chrX 15303740 15303768 -7119059 + AT_rich Low_complexity Low_complexity 1 28 0 1 701 189 74 0 0 chrX 15304391 15304418 -7118409 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 701 231 288 0 0 chrX 15304953 15305026 -7117801 + (CCG)n Simple_repeat Simple_repeat 1 73 0 1 701 23 0 0 0 chrX 15305952 15305975 -7116852 + AT_rich Low_complexity Low_complexity 1 23 0 1 701 38737 1 0 0 chrX 15307142 15311364 -7111463 + DOC6_DM LINE Jockey 1 4222 0 1 701 375 211 194 50 chrX 15311576 15311736 -7111091 + XDMR_DM Unknown Unknown 119 301 -59 1 701 1254 160 258 0 chrX 15311730 15312014 -7110813 + XDMR_DM Unknown Unknown 1 359 -1 1 701 974 278 52 14 chrX 15311789 15312216 -7110611 - SAR_DM Satellite Satellite -554 918 476 1 701 284 256 0 11 chrX 15314277 15314364 -7108463 + (TG)n Simple_repeat Simple_repeat 1 86 0 1 701 262 262 0 55 chrX 15314415 15314524 -7108303 - ROO_I LTR Pao -7513 743 641 1 701 280 218 36 82 chrX 15314529 15314639 -7108188 - ROO_I LTR Pao -7510 746 642 1 701 198 128 0 0 chrX 15314666 15314705 -7108122 + (CTG)n Simple_repeat Simple_repeat 2 40 0 1 701 236 274 0 0 chrX 15314710 15314772 -7108055 - ROO_I LTR Pao -7553 703 642 1 701 498 108 0 0 chrX 15315489 15315572 -7107255 + (TTG)n Simple_repeat Simple_repeat 2 84 0 1 701 447 52 0 0 chrX 15315758 15315816 -7107011 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 701 5687 0 0 2 chrX 15316006 15316633 -7106194 - POGO DNA Pogo 0 2121 1496 1 701 7709 1 0 1 chrX 15316632 15317462 -7105365 - POGO DNA Pogo -1292 829 1 1 701 189 121 0 0 chrX 15317723 15317756 -7105071 + (GAATG)n Simple_repeat Simple_repeat 1 33 0 1 701 26 30 0 0 chrX 15318058 15318091 -7104736 + AT_rich Low_complexity Low_complexity 1 33 0 1 701 22 0 0 0 chrX 15319021 15319043 -7103784 + AT_rich Low_complexity Low_complexity 1 22 0 1 701 182 37 0 36 chrX 15319425 15319453 -7103374 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 701 240 59 0 0 chrX 15319582 15319616 -7103211 + (CTG)n Simple_repeat Simple_repeat 1 34 0 1 701 23 0 0 0 chrX 15321527 15321550 -7101277 + AT_rich Low_complexity Low_complexity 1 23 0 1 701 384 71 0 0 chrX 15322364 15322420 -7100407 + (CCAA)n Simple_repeat Simple_repeat 4 59 0 1 701 180 125 0 0 chrX 15322639 15322671 -7100156 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 701 204 125 0 0 chrX 15325277 15325309 -7097518 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 1 701 186 43 0 0 chrX 15325662 15325685 -7097142 + (CAGT)n Simple_repeat Simple_repeat 1 23 0 1 701 224 229 0 16 chrX 15326333 15326395 -7096432 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 701 1774 106 166 82 chrX 15327252 15327673 -7095154 + DNAREP1_DM LINE Penelope 5 594 0 1 701 23 33 0 0 chrX 15327984 15328014 -7094813 + AT_rich Low_complexity Low_complexity 1 30 0 1 701 243 233 0 16 chrX 15328756 15328817 -7094010 + (CAGC)n Simple_repeat Simple_repeat 3 62 0 1 701 26 0 0 0 chrX 15328966 15328992 -7093835 + AT_rich Low_complexity Low_complexity 1 26 0 1 701 3277 3 0 24 chrX 15329759 15330135 -7092692 + ROVER-LTR_DM LTR Gypsy 1 367 0 1 701 276 102 0 0 chrX 15330260 15330309 -7092518 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 701 192 158 0 0 chrX 15330994 15331032 -7091795 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 701 216 259 0 0 chrX 15331369 15331427 -7091400 + CT-rich Low_complexity Low_complexity 3 60 0 1 701 242 208 0 0 chrX 15331631 15331684 -7091143 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 701 237 304 0 0 chrX 15331745 15331824 -7091003 + A-rich Low_complexity Low_complexity 5 83 0 1 701 192 163 0 0 chrX 15331969 15332012 -7090815 + (CAGC)n Simple_repeat Simple_repeat 4 46 0 1 701 216 158 0 0 chrX 15332035 15332073 -7090754 + (CAAG)n Simple_repeat Simple_repeat 4 41 0 1 701 33 43 0 0 chrX 15333124 15333171 -7089656 + AT_rich Low_complexity Low_complexity 1 47 0 1 701 23 54 0 0 chrX 15333287 15333324 -7089503 + AT_rich Low_complexity Low_complexity 1 37 0 1 701 198 0 0 0 chrX 15333872 15333894 -7088933 + (A)n Simple_repeat Simple_repeat 1 22 0 1 701 22 0 0 0 chrX 15334112 15334134 -7088693 + AT_rich Low_complexity Low_complexity 1 22 0 1 701 276 111 0 0 chrX 15334572 15334617 -7088210 + (TTG)n Simple_repeat Simple_repeat 1 45 0 1 701 222 105 0 0 chrX 15334625 15334663 -7088164 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 701 21 0 0 0 chrX 15334793 15334814 -7088013 + AT_rich Low_complexity Low_complexity 1 21 0 1 701 34 0 0 0 chrX 15334876 15334910 -7087917 + AT_rich Low_complexity Low_complexity 1 34 0 1 701 221 329 26 0 chrX 15335076 15335152 -7087675 + (TTCGGG)n Simple_repeat Simple_repeat 5 82 0 1 702 246 62 0 0 chrX 15335782 15335814 -7087013 + (CAAGC)n Simple_repeat Simple_repeat 5 36 0 1 702 41 58 0 0 chrX 15336999 15337068 -7085759 + AT_rich Low_complexity Low_complexity 1 69 0 1 702 202 200 0 0 chrX 15337464 15337504 -7085323 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 702 184 77 25 25 chrX 15337666 15337706 -7085121 + (CCA)n Simple_repeat Simple_repeat 2 41 0 1 702 30 0 0 0 chrX 15338490 15338520 -7084307 + AT_rich Low_complexity Low_complexity 1 30 0 1 702 29 0 0 0 chrX 15338640 15338669 -7084158 + AT_rich Low_complexity Low_complexity 1 29 0 1 702 189 147 0 0 chrX 15339392 15339426 -7083401 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 1 702 25 51 0 0 chrX 15340665 15340704 -7082123 + AT_rich Low_complexity Low_complexity 1 39 0 1 702 203 61 30 0 chrX 15340715 15340748 -7082079 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 702 180 0 0 0 chrX 15340810 15340830 -7081997 + (CAG)n Simple_repeat Simple_repeat 1 20 0 1 702 208 188 33 66 chrX 15341022 15341113 -7081714 + T-rich Low_complexity Low_complexity 3 90 0 1 702 23 86 0 0 chrX 15347195 15347253 -7075574 + AT_rich Low_complexity Low_complexity 1 58 0 1 702 21 0 0 0 chrX 15348881 15348902 -7073925 + AT_rich Low_complexity Low_complexity 1 21 0 1 702 21 36 0 0 chrX 15349542 15349570 -7073257 + AT_rich Low_complexity Low_complexity 1 28 0 1 702 24 0 0 0 chrX 15356640 15356664 -7066163 + AT_rich Low_complexity Low_complexity 1 24 0 1 702 203 167 0 0 chrX 15357958 15358000 -7064827 + CT-rich Low_complexity Low_complexity 1 42 0 1 702 211 254 0 17 chrX 15359823 15359883 -7062944 + (CAGAA)n Simple_repeat Simple_repeat 2 60 0 1 702 201 74 0 0 chrX 15360751 15360778 -7062049 + (CCTAG)n Simple_repeat Simple_repeat 2 28 0 1 702 22 56 0 0 chrX 15369717 15369753 -7053074 + AT_rich Low_complexity Low_complexity 1 36 0 1 702 237 296 0 0 chrX 15374293 15374374 -7048453 + (CAG)n Simple_repeat Simple_repeat 1 81 0 1 702 227 240 0 59 chrX 15374376 15374478 -7048349 + ROO_I LTR Pao 640 735 -7521 1 702 1284 182 16 32 chrX 15375822 15376072 -7046755 + BS2 LINE Jockey 3233 3478 -1243 1 702 379 192 13 13 chrX 15376090 15376169 -7046658 + BS2 LINE Jockey 4465 4543 -178 1 702 216 67 0 0 chrX 15377025 15377055 -7045772 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 702 225 197 0 0 chrX 15378794 15378855 -7043972 + (CCCA)n Simple_repeat Simple_repeat 1 61 0 1 702 219 125 0 0 chrX 15378870 15378910 -7043917 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 702 25 0 0 0 chrX 15380979 15381004 -7041823 + AT_rich Low_complexity Low_complexity 1 25 0 1 702 24 85 0 0 chrX 15382966 15383025 -7039802 + AT_rich Low_complexity Low_complexity 1 59 0 1 702 275 319 0 31 chrX 15383628 15383725 -7039102 + C-rich Low_complexity Low_complexity 3 96 0 1 702 195 42 0 0 chrX 15386038 15386062 -7036765 + (ATG)n Simple_repeat Simple_repeat 1 24 0 1 702 21 0 0 0 chrX 15386105 15386126 -7036701 + AT_rich Low_complexity Low_complexity 1 21 0 1 702 221 169 16 33 chrX 15386179 15386240 -7036587 + (CCCA)n Simple_repeat Simple_repeat 3 62 0 1 702 198 0 0 0 chrX 15387018 15387040 -7035787 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1 702 183 139 0 0 chrX 15388233 15388269 -7034558 + (A)n Simple_repeat Simple_repeat 1 36 0 1 702 222 37 0 0 chrX 15389408 15389435 -7033392 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 1 702 22 35 0 0 chrX 15389822 15389851 -7032976 + AT_rich Low_complexity Low_complexity 1 29 0 1 702 294 106 0 0 chrX 15390602 15390649 -7032178 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 702 195 42 0 0 chrX 15391977 15392001 -7030826 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 702 209 204 0 0 chrX 15392014 15392063 -7030764 + A-rich Low_complexity Low_complexity 1 49 0 1 702 209 270 0 31 chrX 15392140 15392205 -7030622 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 1 702 23 33 0 0 chrX 15392696 15392726 -7030101 + AT_rich Low_complexity Low_complexity 1 30 0 1 702 27 0 0 0 chrX 15393376 15393403 -7029424 + AT_rich Low_complexity Low_complexity 1 27 0 1 702 267 103 0 0 chrX 15395771 15395810 -7027017 + (CATAT)n Simple_repeat Simple_repeat 2 40 0 1 702 252 143 0 0 chrX 15396246 15396288 -7026539 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 702 21 0 0 0 chrX 15396474 15396495 -7026332 + AT_rich Low_complexity Low_complexity 1 21 0 1 702 198 143 0 0 chrX 15396952 15396987 -7025840 + (CAGAGA)n Simple_repeat Simple_repeat 1 35 0 1 702 21 71 0 0 chrX 15400953 15400995 -7021832 + AT_rich Low_complexity Low_complexity 1 42 0 1 702 203 175 0 0 chrX 15402109 15402149 -7020678 + A-rich Low_complexity Low_complexity 4 43 0 1 702 250 185 19 0 chrX 15402920 15402974 -7019853 + A-rich Low_complexity Low_complexity 1 55 0 1 702 213 245 10 58 chrX 15403109 15403213 -7019614 + (TA)n Simple_repeat Simple_repeat 2 100 0 1 702 237 98 0 0 chrX 15404569 15404610 -7018217 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 702 23 0 0 0 chrX 15404786 15404809 -7018018 + AT_rich Low_complexity Low_complexity 1 23 0 1 702 296 119 0 17 chrX 15405208 15405268 -7017559 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 702 243 61 0 0 chrX 15405621 15405654 -7017173 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 702 225 132 0 0 chrX 15406422 15406460 -7016367 + (CAAT)n Simple_repeat Simple_repeat 1 38 0 1 702 310 154 13 13 chrX 15406793 15406872 -7015955 + (TTG)n Simple_repeat Simple_repeat 1 79 0 1 702 222 128 0 0 chrX 15406998 15407037 -7015790 + (TCC)n Simple_repeat Simple_repeat 1 39 0 1 702 195 186 0 0 chrX 15409682 15409725 -7013102 + CT-rich Low_complexity Low_complexity 1 43 0 1 702 309 151 0 34 chrX 15416176 15416265 -7006562 + (ATTCG)n Simple_repeat Simple_repeat 5 90 0 1 702 25 0 0 0 chrX 15417214 15417239 -7005588 + AT_rich Low_complexity Low_complexity 1 25 0 1 702 192 125 0 0 chrX 15417490 15417522 -7005305 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 702 26 30 0 0 chrX 15418205 15418238 -7004589 + AT_rich Low_complexity Low_complexity 1 33 0 1 702 272 70 0 23 chrX 15419677 15419721 -7003106 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 702 22 0 0 0 chrX 15424648 15424670 -6998157 + AT_rich Low_complexity Low_complexity 1 22 0 1 702 219 139 0 0 chrX 15425093 15425129 -6997698 + (TTGG)n Simple_repeat Simple_repeat 3 38 0 1 702 204 40 0 0 chrX 15425228 15425253 -6997574 + (CATCC)n Simple_repeat Simple_repeat 2 26 0 1 702 1031 150 50 7 chrX 15429426 15429649 -6993178 - XDMR Unknown Unknown -12 348 108 1 702 339 186 14 0 chrX 15429644 15429714 -6993113 - XDMR Unknown Unknown -23 338 268 1 702 209 237 13 38 chrX 15430391 15430470 -6992357 + A-rich Low_complexity Low_complexity 5 81 0 1 702 404 67 0 16 chrX 15430746 15430807 -6992020 + (CAT)n Simple_repeat Simple_repeat 1 60 0 1 702 205 195 0 0 chrX 15431700 15431741 -6991086 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1 702 198 224 0 0 chrX 15432369 15432418 -6990409 + (CGA)n Simple_repeat Simple_repeat 2 50 0 1 702 180 0 0 0 chrX 15433045 15433065 -6989762 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 702 241 207 0 17 chrX 15433498 15433557 -6989270 + (TTG)n Simple_repeat Simple_repeat 3 60 0 1 702 300 70 0 0 chrX 15433627 15433670 -6989157 + (TGG)n Simple_repeat Simple_repeat 2 44 0 1 702 207 229 21 0 chrX 15434202 15434250 -6988577 + (CAAT)n Simple_repeat Simple_repeat 2 50 0 1 702 230 136 23 0 chrX 15434478 15434522 -6988305 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 702 207 88 0 0 chrX 15436307 15436341 -6986486 + (A)n Simple_repeat Simple_repeat 1 34 0 1 702 22 0 0 0 chrX 15437154 15437176 -6985651 + AT_rich Low_complexity Low_complexity 1 22 0 1 702 204 216 0 0 chrX 15437216 15437253 -6985574 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 702 220 229 16 16 chrX 15438495 15438557 -6984270 + (CTG)n Simple_repeat Simple_repeat 2 63 0 1 702 195 42 0 0 chrX 15438701 15438725 -6984102 + (CAT)n Simple_repeat Simple_repeat 3 26 0 1 702 291 54 0 0 chrX 15439164 15439201 -6983626 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 702 204 111 0 0 chrX 15439571 15439607 -6983220 + (A)n Simple_repeat Simple_repeat 1 36 0 1 702 258 132 0 0 chrX 15439778 15439831 -6982996 + (GGATG)n Simple_repeat Simple_repeat 3 55 0 1 702 201 39 0 0 chrX 15439871 15439897 -6982930 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 702 195 100 0 0 chrX 15440391 15440421 -6982406 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 702 229 91 0 102 chrX 15441608 15441657 -6981170 + T-rich Low_complexity Low_complexity 2 45 0 1 702 245 0 0 160 chrX 15442289 15442414 -6980413 + (CAGAT)n Simple_repeat Simple_repeat 1 105 0 1 702 208 0 0 160 chrX 15442545 15442726 -6980101 + (CAGTA)n Simple_repeat Simple_repeat 4 155 0 1 702 24 0 0 0 chrX 15443703 15443727 -6979100 + AT_rich Low_complexity Low_complexity 1 24 0 1 702 846 61 0 34 chrX 15446840 15446959 -6975868 + Transib-N1_DM DNA Transib 1 115 -399 1 702 1112 130 175 23 chrX 15447324 15447659 -6975168 + Transib-N1_DM DNA Transib 129 514 0 1 702 252 123 29 44 chrX 15447753 15447821 -6975006 + A-rich Low_complexity Low_complexity 4 70 0 1 702 211 273 13 0 chrX 15447936 15448013 -6974814 + (CAAA)n Simple_repeat Simple_repeat 4 81 0 1 702 21 0 0 0 chrX 15448461 15448482 -6974345 + AT_rich Low_complexity Low_complexity 1 21 0 1 702 1742 109 60 103 chrX 15448774 15449256 -6973571 + DNAREP1_DM LINE Penelope 2 594 0 1 702 1413 100 232 11 chrX 15450381 15450644 -6972183 + DNAREP1_DM LINE Penelope 274 594 0 1 702 24 0 0 0 chrX 15452605 15452629 -6970198 + AT_rich Low_complexity Low_complexity 1 24 0 1 702 183 80 0 0 chrX 15456235 15456260 -6966567 + (CGAAA)n Simple_repeat Simple_repeat 1 25 0 1 702 219 125 0 0 chrX 15456655 15456695 -6966132 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 702 207 0 0 0 chrX 15457019 15457042 -6965785 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 702 207 191 0 0 chrX 15457049 15457091 -6965736 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 702 203 231 0 30 chrX 15457195 15457262 -6965565 + (TAAA)n Simple_repeat Simple_repeat 1 65 0 1 702 21 0 0 0 chrX 15457295 15457316 -6965511 + AT_rich Low_complexity Low_complexity 1 21 0 1 702 26 30 0 0 chrX 15457720 15457753 -6965074 + AT_rich Low_complexity Low_complexity 1 33 0 1 702 221 68 43 64 chrX 15458801 15458848 -6963979 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 1 702 22 35 0 0 chrX 15460415 15460444 -6962383 + AT_rich Low_complexity Low_complexity 1 29 0 1 702 22 0 0 0 chrX 15460607 15460629 -6962198 + AT_rich Low_complexity Low_complexity 1 22 0 1 702 426 189 0 10 chrX 15461945 15462041 -6960786 - Transib-N1_DM DNA Transib -399 115 21 1 702 203 192 19 19 chrX 15462070 15462123 -6960704 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 1 702 26 0 0 0 chrX 15462603 15462629 -6960198 + AT_rich Low_complexity Low_complexity 1 26 0 1 702 24 32 0 0 chrX 15466220 15466251 -6956576 + AT_rich Low_complexity Low_complexity 1 31 0 1 703 441 93 200 0 chrX 15468670 15468745 -6954082 + DNAREP1_DM LINE Penelope 2 91 -503 1 703 1209 118 128 0 chrX 15468759 15468962 -6953865 + DNAREP1_DM LINE Penelope 366 594 0 1 703 1805 72 133 0 chrX 15469945 15470209 -6952618 + DNAREP1_DM LINE Penelope 296 594 0 1 703 22 35 0 0 chrX 15473587 15473616 -6949211 + AT_rich Low_complexity Low_complexity 1 29 0 1 703 22 0 0 0 chrX 15479516 15479538 -6943289 + AT_rich Low_complexity Low_complexity 1 22 0 1 703 210 67 21 43 chrX 15484861 15484908 -6937919 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 703 23 33 0 0 chrX 15485166 15485196 -6937631 + AT_rich Low_complexity Low_complexity 1 30 0 1 703 24 32 0 0 chrX 15486590 15486621 -6936206 + AT_rich Low_complexity Low_complexity 1 31 0 1 703 23 0 0 0 chrX 15486690 15486713 -6936114 + AT_rich Low_complexity Low_complexity 1 23 0 1 703 234 62 0 0 chrX 15487226 15487258 -6935569 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 703 228 67 0 0 chrX 15487775 15487805 -6935022 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 703 25 0 0 0 chrX 15488066 15488091 -6934736 + AT_rich Low_complexity Low_complexity 1 25 0 1 703 28 48 0 0 chrX 15488918 15488960 -6933867 + AT_rich Low_complexity Low_complexity 1 42 0 1 703 226 125 20 20 chrX 15489509 15489558 -6933269 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 1 703 181 128 0 41 chrX 15490078 15490127 -6932700 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1 703 40 21 0 0 chrX 15490567 15490614 -6932213 + AT_rich Low_complexity Low_complexity 1 47 0 1 703 233 29 29 0 chrX 15490929 15490963 -6931864 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 703 209 207 17 0 chrX 15491362 15491420 -6931407 + (CCCA)n Simple_repeat Simple_repeat 4 62 0 1 703 392 89 0 0 chrX 15491526 15491582 -6931245 - DNAREP1_DM LINE Penelope 0 594 539 1 703 565 229 32 11 chrX 15491713 15491898 -6930929 - XDMR Unknown Unknown -172 189 1 1 703 1392 257 23 31 chrX 15491757 15492331 -6930496 + SAR_DM Satellite Satellite 218 786 -686 1 703 21 36 0 0 chrX 15493082 15493110 -6929717 + AT_rich Low_complexity Low_complexity 1 28 0 1 703 213 65 0 0 chrX 15497286 15497317 -6925510 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 703 35 71 0 0 chrX 15497661 15497731 -6925096 + AT_rich Low_complexity Low_complexity 1 70 0 1 703 226 167 56 0 chrX 15497740 15497812 -6925015 + (TAA)n Simple_repeat Simple_repeat 2 77 0 1 703 205 200 0 22 chrX 15497838 15497884 -6924943 + T-rich Low_complexity Low_complexity 1 45 0 1 703 192 77 0 0 chrX 15498076 15498102 -6924725 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 703 291 54 0 0 chrX 15498324 15498361 -6924466 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 703 216 243 0 45 chrX 15498558 15498670 -6924157 + T-rich Low_complexity Low_complexity 5 111 0 1 703 189 107 0 0 chrX 15498815 15498843 -6923984 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 703 263 141 16 0 chrX 15499018 15499082 -6923745 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 703 284 143 14 0 chrX 15502176 15502246 -6920581 + (TCCA)n Simple_repeat Simple_repeat 1 71 0 1 703 241 258 0 0 chrX 15502891 15502957 -6919870 + A-rich Low_complexity Low_complexity 1 66 0 1 703 226 273 0 15 chrX 15503060 15503116 -6919711 + CT-rich Low_complexity Low_complexity 12 67 0 1 703 213 39 0 0 chrX 15503116 15503142 -6919685 + (CTG)n Simple_repeat Simple_repeat 2 27 0 1 703 297 89 0 0 chrX 15503203 15503248 -6919579 + (CAGC)n Simple_repeat Simple_repeat 3 47 0 1 703 21 0 0 0 chrX 15505265 15505286 -6917541 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 187 177 32 0 chrX 15505435 15505497 -6917330 + (CTAG)n Simple_repeat Simple_repeat 1 64 0 1 703 201 39 0 0 chrX 15505645 15505671 -6917156 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 1 703 181 120 0 57 chrX 15506515 15506568 -6916259 + A-rich Low_complexity Low_complexity 5 54 0 1 703 248 186 0 17 chrX 15506601 15506661 -6916166 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 1 703 381 149 0 0 chrX 15506848 15506915 -6915912 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 703 27 0 0 0 chrX 15507635 15507662 -6915165 + AT_rich Low_complexity Low_complexity 1 27 0 1 703 21 0 0 0 chrX 15507753 15507774 -6915053 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 180 0 0 0 chrX 15507795 15507815 -6915012 + (ATG)n Simple_repeat Simple_repeat 1 20 0 1 703 22 0 0 0 chrX 15507898 15507920 -6914907 + AT_rich Low_complexity Low_complexity 1 22 0 1 703 294 94 15 30 chrX 15508053 15508119 -6914708 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 703 365 195 0 0 chrX 15508204 15508281 -6914546 + (TATATG)n Simple_repeat Simple_repeat 1 77 0 1 703 34 24 0 0 chrX 15511507 15511548 -6911279 + AT_rich Low_complexity Low_complexity 1 41 0 1 703 190 81 26 26 chrX 15511689 15511727 -6911100 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 703 24 0 0 0 chrX 15512183 15512207 -6910620 + AT_rich Low_complexity Low_complexity 1 24 0 1 703 236 246 14 42 chrX 15512545 15512617 -6910210 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 1 703 225 154 0 0 chrX 15512773 15512812 -6910015 + (CATA)n Simple_repeat Simple_repeat 1 39 0 1 703 21 0 0 0 chrX 15512838 15512859 -6909968 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 216 204 0 0 chrX 15513021 15513065 -6909762 + T-rich Low_complexity Low_complexity 1 44 0 1 703 204 158 0 0 chrX 15513150 15513188 -6909639 + (CAAT)n Simple_repeat Simple_repeat 4 41 0 1 703 21 0 0 0 chrX 15513369 15513390 -6909437 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 207 0 0 0 chrX 15513692 15513715 -6909112 + (GA)n Simple_repeat Simple_repeat 1 23 0 1 703 273 128 0 0 chrX 15514026 15514073 -6908754 + (TTTTC)n Simple_repeat Simple_repeat 1 47 0 1 703 201 74 0 0 chrX 15514600 15514627 -6908200 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 703 294 143 0 0 chrX 15514874 15514937 -6907890 + (CAA)n Simple_repeat Simple_repeat 1 63 0 1 703 29 47 0 0 chrX 15515031 15515074 -6907753 + AT_rich Low_complexity Low_complexity 1 43 0 1 703 24 0 0 0 chrX 15515455 15515479 -6907348 + AT_rich Low_complexity Low_complexity 1 24 0 1 703 192 40 0 0 chrX 15516480 15516505 -6906322 + (TTGG)n Simple_repeat Simple_repeat 3 27 0 1 703 188 67 33 0 chrX 15517234 15517264 -6905563 + (CGAAA)n Simple_repeat Simple_repeat 3 33 0 1 703 204 97 0 0 chrX 15517353 15517384 -6905443 + (T)n Simple_repeat Simple_repeat 1 31 0 1 703 22 0 0 0 chrX 15518903 15518925 -6903902 + AT_rich Low_complexity Low_complexity 1 22 0 1 703 216 167 29 43 chrX 15520029 15520098 -6902729 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 1 703 273 89 0 0 chrX 15520453 15520498 -6902329 + (TATCG)n Simple_repeat Simple_repeat 2 46 0 1 703 222 197 0 62 chrX 15520607 15520672 -6902155 + (CAG)n Simple_repeat Simple_repeat 2 62 0 1 703 234 0 0 0 chrX 15520793 15520819 -6902008 + (TAA)n Simple_repeat Simple_repeat 3 28 0 1 703 210 118 0 0 chrX 15522022 15522056 -6900771 + (CATA)n Simple_repeat Simple_repeat 1 34 0 1 703 24 53 0 0 chrX 15522573 15522611 -6900216 + AT_rich Low_complexity Low_complexity 1 38 0 1 703 242 125 21 0 chrX 15523985 15524033 -6898794 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 703 483 220 0 0 chrX 15524151 15524283 -6898544 + (ACTG)n Simple_repeat Simple_repeat 4 135 0 1 703 208 188 0 28 chrX 15524532 15524603 -6898224 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 703 276 127 0 0 chrX 15526355 15526410 -6896417 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 1 703 201 132 0 0 chrX 15526506 15526544 -6896283 + (T)n Simple_repeat Simple_repeat 1 38 0 1 703 240 100 0 0 chrX 15527534 15527574 -6895253 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 703 264 122 0 0 chrX 15527679 15527720 -6895107 + (TCTCC)n Simple_repeat Simple_repeat 1 41 0 1 703 26 64 0 0 chrX 15528032 15528079 -6894748 + AT_rich Low_complexity Low_complexity 1 47 0 1 703 32 26 0 0 chrX 15528959 15528998 -6893829 + AT_rich Low_complexity Low_complexity 1 39 0 1 703 24 0 0 0 chrX 15529078 15529102 -6893725 + AT_rich Low_complexity Low_complexity 1 24 0 1 703 263 85 0 21 chrX 15529735 15529783 -6893044 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 703 28 61 0 0 chrX 15530288 15530337 -6892490 + AT_rich Low_complexity Low_complexity 1 49 0 1 703 201 311 13 20 chrX 15530409 15530560 -6892267 + (ATG)n Simple_repeat Simple_repeat 3 152 0 1 703 250 233 35 0 chrX 15530747 15530833 -6891994 + A-rich Low_complexity Low_complexity 2 90 0 1 703 226 208 0 0 chrX 15530843 15530891 -6891936 + GA-rich Low_complexity Low_complexity 1 48 0 1 703 23 78 0 0 chrX 15532350 15532401 -6890426 + AT_rich Low_complexity Low_complexity 1 51 0 1 703 214 195 0 0 chrX 15532901 15532942 -6889885 + (CAATT)n Simple_repeat Simple_repeat 4 44 0 1 703 309 118 0 0 chrX 15533597 15533648 -6889179 + (TCCA)n Simple_repeat Simple_repeat 1 51 0 1 703 223 254 0 0 chrX 15534089 15534156 -6888671 + A-rich Low_complexity Low_complexity 1 67 0 1 703 234 180 0 0 chrX 15534288 15534349 -6888478 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 703 21 0 0 0 chrX 15534636 15534657 -6888170 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 228 86 0 0 chrX 15535989 15536024 -6886803 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 1 703 248 211 0 0 chrX 15536705 15536757 -6886070 + (CAGC)n Simple_repeat Simple_repeat 1 52 0 1 703 237 163 0 0 chrX 15539274 15539323 -6883504 + (GATTG)n Simple_repeat Simple_repeat 3 51 0 1 703 216 0 0 0 chrX 15540729 15540753 -6882074 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 703 302 219 0 0 chrX 15542410 15542474 -6880353 + DNAREP1_DM LINE Penelope 1 64 -530 1 703 225 0 0 0 chrX 15543419 15543444 -6879383 + (T)n Simple_repeat Simple_repeat 1 25 0 1 703 186 71 0 0 chrX 15543892 15543920 -6878907 + (ATTCG)n Simple_repeat Simple_repeat 2 29 0 1 703 246 206 0 0 chrX 15544113 15544181 -6878646 + (ATTCG)n Simple_repeat Simple_repeat 3 70 0 1 703 264 77 0 0 chrX 15545615 15545654 -6877173 + (TCC)n Simple_repeat Simple_repeat 2 40 0 1 703 21 0 0 0 chrX 15547064 15547085 -6875742 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 365 130 0 0 chrX 15547410 15547464 -6875363 + DNAREP1_DM LINE Penelope 6 59 -535 1 703 319 229 36 0 chrX 15547502 15547585 -6875242 + DNAREP1_DM LINE Penelope 509 594 0 1 703 22 0 0 0 chrX 15547606 15547628 -6875199 + AT_rich Low_complexity Low_complexity 1 22 0 1 703 26 0 0 0 chrX 15547892 15547918 -6874909 + AT_rich Low_complexity Low_complexity 1 26 0 1 703 25 0 0 0 chrX 15549151 15549176 -6873651 + AT_rich Low_complexity Low_complexity 1 25 0 1 703 24 0 0 0 chrX 15549269 15549293 -6873534 + AT_rich Low_complexity Low_complexity 1 24 0 1 703 405 217 0 19 chrX 15549668 15549776 -6873051 + DNAREP1_DM LINE Penelope 32 137 -457 1 703 274 133 44 0 chrX 15549790 15549835 -6872992 + DNAREP1_DM LINE Penelope 413 459 -135 1 703 22 70 0 0 chrX 15549895 15549938 -6872889 + AT_rich Low_complexity Low_complexity 1 43 0 1 703 25 0 0 0 chrX 15550331 15550356 -6872471 + AT_rich Low_complexity Low_complexity 1 25 0 1 703 350 152 15 0 chrX 15552522 15552588 -6870239 + DNAREP1_DM LINE Penelope 500 566 -28 1 703 27 62 0 0 chrX 15552769 15552817 -6870010 + AT_rich Low_complexity Low_complexity 1 48 0 1 703 209 33 33 0 chrX 15553169 15553199 -6869628 + (CAG)n Simple_repeat Simple_repeat 1 31 0 1 703 252 188 0 0 chrX 15553270 15553334 -6869493 + GA-rich Low_complexity Low_complexity 3 66 0 1 703 23 68 0 0 chrX 15553901 15553945 -6868882 + AT_rich Low_complexity Low_complexity 1 44 0 1 703 228 67 0 0 chrX 15558486 15558516 -6864311 + (GTCTG)n Simple_repeat Simple_repeat 4 33 0 1 703 222 118 0 0 chrX 15560055 15560089 -6862738 + (CCCCCG)n Simple_repeat Simple_repeat 3 36 0 1 703 621 175 0 16 chrX 15560692 15560814 -6862013 + DNAREP1_DM LINE Penelope 1 120 -474 1 703 509 158 241 17 chrX 15560811 15560927 -6861900 + DNAREP1_DM LINE Penelope 439 580 -14 1 703 23 0 0 0 chrX 15563841 15563864 -6858963 + AT_rich Low_complexity Low_complexity 1 23 0 1 703 198 0 0 0 chrX 15569138 15569160 -6853667 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 703 25 0 0 0 chrX 15569245 15569270 -6853557 + AT_rich Low_complexity Low_complexity 1 25 0 1 703 180 152 0 0 chrX 15570190 15570223 -6852604 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 703 22 0 0 0 chrX 15571716 15571738 -6851089 + AT_rich Low_complexity Low_complexity 1 22 0 1 703 339 113 0 0 chrX 15573154 15573207 -6849620 + (TTA)n Simple_repeat Simple_repeat 3 55 0 1 703 42 20 0 0 chrX 15575199 15575248 -6847579 + AT_rich Low_complexity Low_complexity 1 49 0 1 703 23 33 0 0 chrX 15575313 15575343 -6847484 + AT_rich Low_complexity Low_complexity 1 30 0 1 703 220 211 0 0 chrX 15577534 15577572 -6845255 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 1 703 258 260 0 0 chrX 15579276 15579533 -6843294 + (ATGGTG)n Simple_repeat Simple_repeat 1 257 0 1 703 267 179 0 0 chrX 15582314 15582381 -6840446 + (TGG)n Simple_repeat Simple_repeat 2 68 0 1 703 26 50 0 0 chrX 15583484 15583524 -6839303 + AT_rich Low_complexity Low_complexity 1 40 0 1 703 258 105 0 0 chrX 15584014 15584052 -6838775 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 703 249 83 0 0 chrX 15586301 15586337 -6836490 + (CCA)n Simple_repeat Simple_repeat 1 36 0 1 703 186 103 0 0 chrX 15589384 15589413 -6833414 + (A)n Simple_repeat Simple_repeat 1 29 0 1 703 216 135 0 0 chrX 15589823 15589860 -6832967 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 703 209 122 24 0 chrX 15590205 15590246 -6832581 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 703 189 94 0 0 chrX 15590469 15590501 -6832326 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1 704 23 0 0 0 chrX 15600329 15600352 -6822475 + AT_rich Low_complexity Low_complexity 1 23 0 1 704 22 35 0 0 chrX 15600537 15600566 -6822261 + AT_rich Low_complexity Low_complexity 1 29 0 1 704 24 0 0 0 chrX 15603342 15603366 -6819461 + AT_rich Low_complexity Low_complexity 1 24 0 1 704 22 56 0 0 chrX 15603619 15603655 -6819172 + AT_rich Low_complexity Low_complexity 1 36 0 1 704 209 119 0 23 chrX 15608047 15608090 -6814737 + (GGA)n Simple_repeat Simple_repeat 2 43 0 1 704 282 194 0 0 chrX 15617445 15617512 -6805315 + (CGA)n Simple_repeat Simple_repeat 3 69 0 1 704 201 39 0 0 chrX 15625320 15625346 -6797481 + (CAGAA)n Simple_repeat Simple_repeat 3 28 0 1 704 21 71 0 0 chrX 15625403 15625445 -6797382 + AT_rich Low_complexity Low_complexity 1 42 0 1 704 21 57 0 0 chrX 15625451 15625486 -6797341 + AT_rich Low_complexity Low_complexity 1 35 0 1 704 23 0 0 0 chrX 15625521 15625544 -6797283 + AT_rich Low_complexity Low_complexity 1 23 0 1 704 25 65 0 0 chrX 15627652 15627698 -6795129 + AT_rich Low_complexity Low_complexity 1 46 0 1 704 216 111 0 0 chrX 15637656 15637692 -6785135 + (CCA)n Simple_repeat Simple_repeat 1 36 0 1 704 1040 39 32 7 chrX 15640375 15640529 -6782298 + Jockey2 LINE Jockey 3270 3427 -1 1 704 185 0 40 0 chrX 15645748 15645773 -6777054 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1 704 21 0 0 0 chrX 15645998 15646019 -6776808 + AT_rich Low_complexity Low_complexity 1 21 0 1 704 207 0 0 0 chrX 15648892 15648915 -6773912 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 1 704 21 36 0 0 chrX 15649607 15649635 -6773192 + AT_rich Low_complexity Low_complexity 1 28 0 1 704 230 347 0 0 chrX 15650462 15650534 -6772293 + (CCCTAA)n Simple_repeat Simple_repeat 5 76 0 1 704 21 36 0 0 chrX 15654218 15654246 -6768581 + AT_rich Low_complexity Low_complexity 1 28 0 1 704 26 50 0 0 chrX 15657048 15657088 -6765739 + AT_rich Low_complexity Low_complexity 1 40 0 1 704 341 233 56 48 chrX 15676186 15676346 -6746481 - SAR_DM Satellite Satellite -377 161 1 1 704 263 248 132 0 chrX 15676247 15676376 -6746451 + XDMR_DM Unknown Unknown 2 147 -213 1 704 258 105 0 0 chrX 15678285 15678323 -6744504 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 704 183 42 0 0 chrX 15679366 15679390 -6743437 + (T)n Simple_repeat Simple_repeat 1 24 0 1 704 26 50 0 0 chrX 15682204 15682244 -6740583 + AT_rich Low_complexity Low_complexity 1 40 0 1 704 207 170 0 0 chrX 15683397 15683444 -6739383 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 704 285 51 0 0 chrX 15684695 15684734 -6738093 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 704 348 24 0 0 chrX 15684966 15685007 -6737820 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 704 22 35 0 0 chrX 15687780 15687809 -6735018 + AT_rich Low_complexity Low_complexity 1 29 0 1 704 38 61 0 0 chrX 15690930 15690996 -6731831 + AT_rich Low_complexity Low_complexity 1 66 0 1 704 344 100 66 11 chrX 15697272 15697363 -6725464 + (TAAA)n Simple_repeat Simple_repeat 2 97 0 1 704 270 0 0 0 chrX 15699040 15699070 -6723757 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1 704 23 33 0 0 chrX 15699402 15699432 -6723395 + AT_rich Low_complexity Low_complexity 1 30 0 1 704 203 182 0 0 chrX 15706018 15706051 -6716776 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 704 198 143 0 0 chrX 15706140 15706175 -6716652 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 704 201 121 0 0 chrX 15706249 15706282 -6716545 + (CAA)n Simple_repeat Simple_repeat 2 34 0 1 704 237 139 0 0 chrX 15706634 15706677 -6716150 + (T)n Simple_repeat Simple_repeat 1 43 0 1 704 239 189 19 0 chrX 15708094 15708147 -6714680 + DMSAT6 Satellite Satellite 268 321 -149 1 704 301 75 0 36 chrX 15708627 15708682 -6714145 + (CATA)n Simple_repeat Simple_repeat 1 53 0 1 704 230 229 14 0 chrX 15710866 15710936 -6711891 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 704 309 68 0 0 chrX 15711288 15711332 -6711495 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 704 249 239 11 54 chrX 15711709 15711802 -6711025 + (CATAC)n Simple_repeat Simple_repeat 3 91 0 1 704 438 69 0 0 chrX 15711876 15711934 -6710893 + (CATAC)n Simple_repeat Simple_repeat 4 61 0 1 704 360 130 0 0 chrX 15715269 15715338 -6707489 + (CAG)n Simple_repeat Simple_repeat 3 71 0 1 704 218 222 0 0 chrX 15715424 15715469 -6707358 + (CAA)n Simple_repeat Simple_repeat 3 47 0 1 704 247 80 0 57 chrX 15715470 15715523 -6707304 + (CCA)n Simple_repeat Simple_repeat 1 50 0 1 704 465 90 0 0 chrX 15715614 15715681 -6707146 + (CAG)n Simple_repeat Simple_repeat 1 67 0 1 704 207 244 0 0 chrX 15715738 15715783 -6707044 + (CCG)n Simple_repeat Simple_repeat 3 47 0 1 704 183 129 0 0 chrX 15716007 15716038 -6706789 + (A)n Simple_repeat Simple_repeat 1 31 0 1 704 213 281 0 0 chrX 15718542 15718599 -6704228 + (CAA)n Simple_repeat Simple_repeat 3 59 0 1 704 369 208 32 50 chrX 15718651 15718772 -6704055 + ROO_I LTR Pao 639 743 -7513 1 704 195 69 0 0 chrX 15719748 15719777 -6703050 + (A)n Simple_repeat Simple_repeat 1 29 0 1 704 546 29 0 0 chrX 15720778 15720846 -6701981 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 705 218 119 0 67 chrX 15728761 15728806 -6694021 + GA-rich Low_complexity Low_complexity 1 42 0 1 705 225 147 0 0 chrX 15729851 15729885 -6692942 - DNAREP1_DM LINE Penelope 0 594 561 1 705 635 140 0 10 chrX 15729881 15729982 -6692845 - DNAREP1_DM LINE Penelope -493 101 2 1 705 23 33 0 0 chrX 15729982 15730012 -6692815 + AT_rich Low_complexity Low_complexity 1 30 0 1 705 1235 46 298 5 chrX 15731025 15731254 -6691573 - DNAREP1_DM LINE Penelope 0 594 299 1 705 33 0 0 0 chrX 15731711 15731744 -6691083 + AT_rich Low_complexity Low_complexity 1 33 0 1 705 264 30 0 0 chrX 15732093 15732126 -6690701 + (A)n Simple_repeat Simple_repeat 1 33 0 1 705 1207 107 157 14 chrX 15735284 15735652 -6687175 - DNAREP1_DM LINE Penelope -150 444 24 1 705 21 0 0 0 chrX 15739199 15739220 -6683607 + AT_rich Low_complexity Low_complexity 1 21 0 1 705 180 0 0 0 chrX 15740791 15740811 -6682016 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 705 41 0 0 0 chrX 15741536 15741577 -6681250 + AT_rich Low_complexity Low_complexity 1 41 0 1 705 31 26 0 0 chrX 15741898 15741936 -6680891 + AT_rich Low_complexity Low_complexity 1 38 0 1 705 24 53 0 0 chrX 15742150 15742188 -6680639 + AT_rich Low_complexity Low_complexity 1 38 0 1 705 21 0 0 0 chrX 15744172 15744193 -6678634 + AT_rich Low_complexity Low_complexity 1 21 0 1 705 183 80 0 0 chrX 15744327 15744352 -6678475 + (T)n Simple_repeat Simple_repeat 1 25 0 1 705 24 0 0 0 chrX 15745383 15745407 -6677420 + AT_rich Low_complexity Low_complexity 1 24 0 1 705 207 69 0 0 chrX 15745927 15745956 -6676871 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 705 221 167 0 0 chrX 15745956 15745998 -6676829 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1 705 280 184 0 84 chrX 15746155 15746262 -6676565 - ROO_I LTR Pao -7521 735 638 1 705 252 0 0 0 chrX 15746714 15746742 -6676085 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 705 22 0 0 0 chrX 15747413 15747435 -6675392 + AT_rich Low_complexity Low_complexity 1 22 0 1 705 25 51 0 0 chrX 15752180 15752219 -6670608 + AT_rich Low_complexity Low_complexity 1 39 0 1 705 30 27 0 0 chrX 15753792 15753829 -6668998 + AT_rich Low_complexity Low_complexity 1 37 0 1 705 27 29 0 0 chrX 15753961 15753995 -6668832 + AT_rich Low_complexity Low_complexity 1 34 0 1 705 218 192 19 37 chrX 15756833 15756941 -6665886 + A-rich Low_complexity Low_complexity 3 108 0 1 705 192 170 0 0 chrX 15757202 15757255 -6665572 + A-rich Low_complexity Low_complexity 1 53 0 1 705 186 103 0 0 chrX 15757643 15757672 -6665155 + (CAGT)n Simple_repeat Simple_repeat 1 29 0 1 705 278 283 5 19 chrX 15757817 15757965 -6664862 + A-rich Low_complexity Low_complexity 1 145 0 1 705 192 111 0 0 chrX 15757996 15758032 -6664795 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 705 240 59 0 0 chrX 15758316 15758350 -6664477 + (CACCT)n Simple_repeat Simple_repeat 5 38 0 1 705 213 39 0 0 chrX 15758456 15758482 -6664345 + (CGAAA)n Simple_repeat Simple_repeat 3 28 0 1 705 22 0 0 0 chrX 15759217 15759239 -6663588 + AT_rich Low_complexity Low_complexity 1 22 0 1 705 231 240 0 0 chrX 15761589 15761639 -6661188 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 705 209 279 0 16 chrX 15764546 15764608 -6658219 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1 705 22 0 0 0 chrX 15764629 15764651 -6658176 + AT_rich Low_complexity Low_complexity 1 22 0 1 705 213 39 0 0 chrX 15777270 15777296 -6645531 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 705 243 146 0 0 chrX 15778139 15778180 -6644647 + (TTG)n Simple_repeat Simple_repeat 1 41 0 1 705 198 103 0 0 chrX 15779498 15779527 -6643300 + (TCG)n Simple_repeat Simple_repeat 1 29 0 1 705 26 0 0 0 chrX 15780488 15780514 -6642313 + AT_rich Low_complexity Low_complexity 1 26 0 1 705 240 154 0 0 chrX 15780589 15780641 -6642186 + CT-rich Low_complexity Low_complexity 2 53 0 1 705 281 312 0 0 chrX 15780645 15780722 -6642105 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 1 705 186 103 0 0 chrX 15780751 15780780 -6642047 + (TTTC)n Simple_repeat Simple_repeat 1 29 0 1 705 26 0 0 0 chrX 15780892 15780918 -6641909 + AT_rich Low_complexity Low_complexity 1 26 0 1 705 218 175 0 0 chrX 15781079 15781119 -6641708 + (CGA)n Simple_repeat Simple_repeat 3 42 0 1 705 23 0 0 0 chrX 15784394 15784417 -6638410 + AT_rich Low_complexity Low_complexity 1 23 0 1 705 182 86 86 0 chrX 15786976 15787011 -6635816 + (ATCTG)n Simple_repeat Simple_repeat 4 41 0 1 705 24 0 0 0 chrX 15787469 15787493 -6635334 + AT_rich Low_complexity Low_complexity 1 24 0 1 705 207 69 0 0 chrX 15788169 15788198 -6634629 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 705 22 0 0 0 chrX 15790147 15790169 -6632658 + AT_rich Low_complexity Low_complexity 1 22 0 1 705 26 30 0 0 chrX 15791529 15791562 -6631265 + AT_rich Low_complexity Low_complexity 1 33 0 1 705 209 58 37 37 chrX 15793211 15793265 -6629562 + (TTATA)n Simple_repeat Simple_repeat 5 58 0 1 705 21 0 0 0 chrX 15796856 15796877 -6625950 + AT_rich Low_complexity Low_complexity 1 21 0 1 705 26 0 0 0 chrX 15797185 15797211 -6625616 + AT_rich Low_complexity Low_complexity 1 26 0 1 705 457 82 0 52 chrX 15797228 15797305 -6625522 - DNAREP1_DM LINE Penelope -84 510 438 1 705 241 254 0 0 chrX 15797731 15797798 -6625029 + A-rich Low_complexity Low_complexity 3 69 0 1 705 23 33 0 0 chrX 15798296 15798326 -6624501 + AT_rich Low_complexity Low_complexity 1 30 0 1 705 25 0 0 0 chrX 15799124 15799149 -6623678 + AT_rich Low_complexity Low_complexity 1 25 0 1 705 444 139 0 0 chrX 15799244 15799323 -6623504 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 705 191 146 0 24 chrX 15799690 15799732 -6623095 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 1 705 25 0 0 0 chrX 15800258 15800283 -6622544 + AT_rich Low_complexity Low_complexity 1 25 0 1 705 192 125 0 0 chrX 15802852 15802884 -6619943 + (TGG)n Simple_repeat Simple_repeat 2 33 0 1 705 263 28 28 0 chrX 15805963 15805999 -6616828 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1 705 228 135 0 0 chrX 15806445 15806482 -6616345 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 705 222 62 0 0 chrX 15814063 15814095 -6608732 + (T)n Simple_repeat Simple_repeat 1 32 0 1 705 29 28 0 0 chrX 15815403 15815439 -6607388 + AT_rich Low_complexity Low_complexity 1 36 0 1 705 26 50 0 0 chrX 15815593 15815633 -6607194 + AT_rich Low_complexity Low_complexity 1 40 0 1 705 31 58 0 0 chrX 15815657 15815709 -6607118 + AT_rich Low_complexity Low_complexity 1 52 0 1 705 180 0 0 0 chrX 15817297 15817317 -6605510 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1 705 22 0 0 0 chrX 15823016 15823038 -6599789 + AT_rich Low_complexity Low_complexity 1 22 0 1 705 26 0 0 0 chrX 15823158 15823184 -6599643 + AT_rich Low_complexity Low_complexity 1 26 0 1 705 1106 83 32 8 chrX 15827990 15828200 -6594627 - DNAREP1_DM LINE Penelope -339 255 1 1 705 21 0 0 0 chrX 15831211 15831232 -6591595 + AT_rich Low_complexity Low_complexity 1 21 0 1 705 189 175 0 0 chrX 15835931 15835971 -6586856 + (TATG)n Simple_repeat Simple_repeat 3 42 0 1 705 282 73 0 0 chrX 15837068 15837109 -6585718 + (CAG)n Simple_repeat Simple_repeat 3 43 0 1 705 183 42 0 0 chrX 15840405 15840429 -6582398 + (A)n Simple_repeat Simple_repeat 1 24 0 1 705 21 0 0 0 chrX 15840610 15840631 -6582196 + AT_rich Low_complexity Low_complexity 1 21 0 1 705 491 33 0 0 chrX 15840681 15840742 -6582085 + DNAREP1_DM LINE Penelope 2 62 -532 1 705 220 270 0 0 chrX 15841208 15841282 -6581545 + T-rich Low_complexity Low_complexity 1 74 0 1 705 358 184 8 58 chrX 15841511 15841632 -6581195 + T-rich Low_complexity Low_complexity 5 119 0 1 705 223 190 17 33 chrX 15841737 15841797 -6581030 + T-rich Low_complexity Low_complexity 5 63 0 1 705 353 286 0 26 chrX 15842451 15842602 -6580225 + (CTG)n Simple_repeat Simple_repeat 1 147 0 1 705 360 97 0 0 chrX 15842817 15842879 -6579948 + (CTG)n Simple_repeat Simple_repeat 1 62 0 1 705 225 65 0 0 chrX 15843420 15843451 -6579376 + (CATAT)n Simple_repeat Simple_repeat 2 32 0 1 705 360 0 0 0 chrX 15844012 15844052 -6578775 + (T)n Simple_repeat Simple_repeat 1 40 0 1 705 390 57 0 0 chrX 15844200 15844253 -6578574 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1 705 316 125 0 30 chrX 15845006 15845072 -6577755 + (CAAGA)n Simple_repeat Simple_repeat 4 67 0 1 705 245 29 29 0 chrX 15846303 15846337 -6576490 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 705 300 273 98 28 chrX 15846565 15846708 -6576119 + DNAREP1_DM LINE Penelope 400 552 -42 1 705 23 33 0 0 chrX 15847738 15847768 -6575059 + AT_rich Low_complexity Low_complexity 1 30 0 1 705 253 139 0 37 chrX 15848734 15848816 -6574011 + T-rich Low_complexity Low_complexity 4 82 0 1 705 23 33 0 0 chrX 15849531 15849561 -6573266 + AT_rich Low_complexity Low_complexity 1 30 0 1 705 24 0 0 0 chrX 15849660 15849684 -6573143 + AT_rich Low_complexity Low_complexity 1 24 0 1 705 537 194 0 0 chrX 15850327 15850507 -6572320 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 1 705 198 229 0 0 chrX 15851003 15851073 -6571754 + (TTCGGG)n Simple_repeat Simple_repeat 2 71 0 1 705 29 101 0 0 chrX 15851518 15851617 -6571210 + AT_rich Low_complexity Low_complexity 1 99 0 1 705 22 56 0 0 chrX 15852375 15852411 -6570416 + AT_rich Low_complexity Low_complexity 1 36 0 1 705 318 26 0 0 chrX 15852738 15852777 -6570050 + (ATTTG)n Simple_repeat Simple_repeat 2 40 0 1 706 186 43 0 0 chrX 15860426 15860449 -6562378 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1 706 24 53 0 0 chrX 15862891 15862929 -6559898 + AT_rich Low_complexity Low_complexity 1 38 0 1 706 267 31 0 0 chrX 15864294 15864326 -6558501 + (GCTG)n Simple_repeat Simple_repeat 2 33 0 1 706 198 0 0 0 chrX 15865741 15865763 -6557064 + (A)n Simple_repeat Simple_repeat 1 22 0 1 706 207 200 0 22 chrX 15866133 15866179 -6556648 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 1 706 210 222 0 0 chrX 15866473 15866527 -6556300 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 706 180 77 0 0 chrX 15866588 15866614 -6556213 + (CGTTG)n Simple_repeat Simple_repeat 2 27 0 1 706 324 120 0 0 chrX 15866715 15866765 -6556062 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 706 276 30 0 0 chrX 15866811 15866844 -6555983 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 706 214 98 39 0 chrX 15867007 15867058 -6555769 + (TTTG)n Simple_repeat Simple_repeat 4 56 0 1 706 25 0 0 0 chrX 15867066 15867091 -6555736 + AT_rich Low_complexity Low_complexity 1 25 0 1 706 240 130 0 0 chrX 15867700 15867746 -6555081 + (TCTG)n Simple_repeat Simple_repeat 1 46 0 1 706 21 71 0 0 chrX 15867991 15868033 -6554794 + AT_rich Low_complexity Low_complexity 1 42 0 1 706 273 206 27 135 chrX 15869819 15870004 -6552823 + HSATII Satellite Satellite 6 170 0 1 706 25 0 0 0 chrX 15870362 15870387 -6552440 + AT_rich Low_complexity Low_complexity 1 25 0 1 706 198 0 0 0 chrX 15870612 15870634 -6552193 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 706 189 0 0 0 chrX 15871422 15871443 -6551384 + (T)n Simple_repeat Simple_repeat 1 21 0 1 706 869 156 0 22 chrX 15871777 15871961 -6550866 - XDMR Unknown Unknown -18 343 164 1 706 25 31 0 0 chrX 15871972 15872004 -6550823 + AT_rich Low_complexity Low_complexity 1 32 0 1 706 219 69 0 0 chrX 15872324 15872353 -6550474 + (CCA)n Simple_repeat Simple_repeat 2 30 0 1 706 225 108 0 0 chrX 15874917 15874954 -6547873 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1 706 30 100 0 0 chrX 15876060 15876160 -6546667 + AT_rich Low_complexity Low_complexity 1 100 0 1 706 498 108 0 0 chrX 15883330 15883413 -6539414 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 706 29 0 0 0 chrX 15884519 15884548 -6538279 + AT_rich Low_complexity Low_complexity 1 29 0 1 706 208 245 0 0 chrX 15885738 15885787 -6537040 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 1 706 24 53 0 0 chrX 15886303 15886341 -6536486 + AT_rich Low_complexity Low_complexity 1 38 0 1 706 31 26 0 0 chrX 15887377 15887415 -6535412 + AT_rich Low_complexity Low_complexity 1 38 0 1 706 30 45 0 0 chrX 15890904 15890948 -6531879 + AT_rich Low_complexity Low_complexity 1 44 0 1 706 30 77 0 0 chrX 15893664 15893729 -6529098 + AT_rich Low_complexity Low_complexity 1 65 0 1 706 28 29 0 0 chrX 15894215 15894250 -6528577 + AT_rich Low_complexity Low_complexity 1 35 0 1 706 21 0 0 0 chrX 15894380 15894401 -6528426 + AT_rich Low_complexity Low_complexity 1 21 0 1 706 319 149 27 0 chrX 15899365 15899439 -6523388 + (CAT)n Simple_repeat Simple_repeat 3 78 0 1 706 21 36 0 0 chrX 15899562 15899590 -6523237 + AT_rich Low_complexity Low_complexity 1 28 0 1 706 22 35 0 0 chrX 15904079 15904108 -6518719 + AT_rich Low_complexity Low_complexity 1 29 0 1 706 37 0 0 0 chrX 15954942 15954979 -6467848 + AT_rich Low_complexity Low_complexity 1 37 0 1 706 34 0 0 0 chrX 15958245 15958279 -6464548 + AT_rich Low_complexity Low_complexity 1 34 0 1 706 21 0 0 0 chrX 15958711 15958732 -6464095 + AT_rich Low_complexity Low_complexity 1 21 0 1 706 280 309 36 14 chrX 15960954 15961092 -6461735 + SAR_DM Satellite Satellite 583 723 -749 1 706 239 222 121 0 chrX 15961223 15961322 -6461505 - XDMR Unknown Unknown -173 188 78 1 706 26 0 0 0 chrX 15961324 15961350 -6461477 + AT_rich Low_complexity Low_complexity 1 26 0 1 706 211 227 23 0 chrX 15961565 15961609 -6461218 + (TATG)n Simple_repeat Simple_repeat 4 48 0 1 706 202 143 35 35 chrX 15961866 15961924 -6460903 + (CATA)n Simple_repeat Simple_repeat 1 58 0 1 706 21 36 0 0 chrX 15964575 15964603 -6458224 + AT_rich Low_complexity Low_complexity 1 28 0 1 706 23 0 0 0 chrX 15968573 15968596 -6454231 + AT_rich Low_complexity Low_complexity 1 23 0 1 706 183 167 0 0 chrX 15970373 15970415 -6452412 + T-rich Low_complexity Low_complexity 6 47 0 1 706 210 171 0 0 chrX 15970970 15971011 -6451816 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 1 706 294 29 0 0 chrX 15971163 15971198 -6451629 + (TATG)n Simple_repeat Simple_repeat 4 38 0 1 706 21 89 0 0 chrX 15971929 15971985 -6450842 + AT_rich Low_complexity Low_complexity 1 56 0 1 706 21 0 0 0 chrX 15972509 15972530 -6450297 + AT_rich Low_complexity Low_complexity 1 21 0 1 706 207 238 47 16 chrX 15973334 15973398 -6449429 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 1 706 42 0 0 0 chrX 15975381 15975423 -6447404 + AT_rich Low_complexity Low_complexity 1 42 0 1 706 33 0 0 0 chrX 15976475 15976508 -6446319 + AT_rich Low_complexity Low_complexity 1 33 0 1 706 216 97 0 0 chrX 15978919 15978950 -6443877 + (CGA)n Simple_repeat Simple_repeat 2 32 0 1 706 23 68 0 0 chrX 15981529 15981573 -6441254 + AT_rich Low_complexity Low_complexity 1 44 0 1 706 285 75 0 0 chrX 15981731 15981771 -6441056 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 706 203 170 21 0 chrX 15981901 15981948 -6440879 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 706 258 116 0 0 chrX 15983479 15983522 -6439305 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 706 22 0 0 0 chrX 15983670 15983692 -6439135 + AT_rich Low_complexity Low_complexity 1 22 0 1 706 26 0 0 0 chrX 15983955 15983981 -6438846 + AT_rich Low_complexity Low_complexity 1 26 0 1 706 21 0 0 0 chrX 15984232 15984253 -6438574 + AT_rich Low_complexity Low_complexity 1 21 0 1 706 213 132 0 0 chrX 15984952 15984990 -6437837 + (T)n Simple_repeat Simple_repeat 1 38 0 1 706 279 140 0 0 chrX 15985722 15985772 -6437055 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 706 22 0 0 0 chrX 15985827 15985849 -6436978 + AT_rich Low_complexity Low_complexity 1 22 0 1 707 257 261 0 0 chrX 15992218 15992283 -6430544 + (CTG)n Simple_repeat Simple_repeat 1 65 0 1 707 208 171 24 0 chrX 15995081 15995122 -6427705 + (CATA)n Simple_repeat Simple_repeat 3 44 0 1 707 309 51 0 0 chrX 15996119 15996158 -6426669 + (CAT)n Simple_repeat Simple_repeat 3 41 0 1 707 25 0 0 0 chrX 15996885 15996910 -6425917 + AT_rich Low_complexity Low_complexity 1 25 0 1 707 204 135 0 0 chrX 15997468 15997505 -6425322 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 707 267 54 0 0 chrX 15998427 15998464 -6424363 + (CAA)n Simple_repeat Simple_repeat 3 39 0 1 707 246 81 0 0 chrX 16000768 16000805 -6422022 + (AACTG)n Simple_repeat Simple_repeat 1 37 0 1 707 426 53 0 0 chrX 16001028 16001085 -6421742 + (CATCG)n Simple_repeat Simple_repeat 2 58 0 1 707 265 246 14 14 chrX 16001245 16001319 -6421508 + (CCCGAA)n Simple_repeat Simple_repeat 2 75 0 1 707 204 40 0 0 chrX 16001532 16001557 -6421270 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1 707 201 94 0 0 chrX 16003311 16003343 -6419484 + (T)n Simple_repeat Simple_repeat 1 32 0 1 707 183 167 0 0 chrX 16003476 16003518 -6419309 + T-rich Low_complexity Low_complexity 1 42 0 1 707 183 100 0 0 chrX 16003754 16003784 -6419043 + (TTGG)n Simple_repeat Simple_repeat 3 32 0 1 707 212 167 21 0 chrX 16004294 16004342 -6418485 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 707 26 0 0 0 chrX 16005578 16005604 -6417223 + AT_rich Low_complexity Low_complexity 1 26 0 1 707 183 80 0 0 chrX 16008538 16008563 -6414264 + (CGA)n Simple_repeat Simple_repeat 3 27 0 1 707 207 191 0 0 chrX 16009138 16009206 -6413621 + T-rich Low_complexity Low_complexity 1 68 0 1 707 510 119 0 0 chrX 16009339 16009423 -6413404 + (CATAC)n Simple_repeat Simple_repeat 4 87 0 1 707 361 133 17 0 chrX 16010250 16010310 -6412517 - DNAREP1_DM LINE Penelope -533 61 1 1 707 297 0 0 0 chrX 16011074 16011107 -6411720 + (TTGGGG)n Simple_repeat Simple_repeat 3 35 0 1 707 205 298 0 0 chrX 16011218 16011275 -6411552 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 707 211 219 0 0 chrX 16011225 16011266 -6411561 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 1 707 243 180 0 0 chrX 16012268 16012318 -6410509 + T-rich Low_complexity Low_complexity 1 50 0 1 707 23 0 0 0 chrX 16012504 16012527 -6410300 + AT_rich Low_complexity Low_complexity 1 23 0 1 707 400 93 0 26 chrX 16012723 16012800 -6410027 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 707 273 98 0 0 chrX 16012931 16012972 -6409855 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 707 249 108 0 0 chrX 16013280 16013317 -6409510 + (CGG)n Simple_repeat Simple_repeat 1 37 0 1 707 186 128 0 0 chrX 16013989 16014028 -6408799 + (TTCGGG)n Simple_repeat Simple_repeat 4 42 0 1 707 258 116 0 0 chrX 16014105 16014148 -6408679 + (TTA)n Simple_repeat Simple_repeat 2 44 0 1 707 186 222 0 0 chrX 16015022 16015076 -6407751 + (TCG)n Simple_repeat Simple_repeat 1 54 0 1 707 261 151 0 0 chrX 16016075 16016128 -6406699 + (CCCGAA)n Simple_repeat Simple_repeat 6 58 0 1 707 303 93 0 0 chrX 16016479 16016522 -6406305 + (TTA)n Simple_repeat Simple_repeat 2 44 0 1 707 243 175 0 0 chrX 16016914 16016971 -6405856 + (TGG)n Simple_repeat Simple_repeat 2 58 0 1 707 299 299 10 20 chrX 16017008 16017107 -6405720 + (CGG)n Simple_repeat Simple_repeat 2 99 0 1 707 381 123 0 0 chrX 16018133 16018198 -6404629 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 707 243 61 0 0 chrX 16018318 16018351 -6404476 + (CCA)n Simple_repeat Simple_repeat 3 35 0 1 707 321 82 0 0 chrX 16018391 16018440 -6404387 + (CGATA)n Simple_repeat Simple_repeat 1 49 0 1 707 215 163 0 20 chrX 16018989 16019039 -6403788 + T-rich Low_complexity Low_complexity 2 50 0 1 707 249 146 0 0 chrX 16020274 16020322 -6402505 + (T)n Simple_repeat Simple_repeat 1 48 0 1 707 285 174 0 0 chrX 16020773 16020842 -6401985 + T-rich Low_complexity Low_complexity 1 69 0 1 707 182 105 26 0 chrX 16022605 16022643 -6400184 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1 707 192 111 0 0 chrX 16022966 16023002 -6399825 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 707 212 0 0 35 chrX 16025704 16025733 -6397094 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 707 180 200 0 0 chrX 16026655 16026700 -6396127 + (CCGAG)n Simple_repeat Simple_repeat 2 46 0 1 707 200 86 0 28 chrX 16026718 16026754 -6396073 + (CAGT)n Simple_repeat Simple_repeat 1 35 0 1 707 351 0 0 0 chrX 16027184 16027223 -6395604 + (A)n Simple_repeat Simple_repeat 1 39 0 1 707 210 162 0 0 chrX 16029886 16029923 -6392904 + A-rich Low_complexity Low_complexity 1 37 0 1 707 444 99 0 0 chrX 16030089 16030160 -6392667 + (CAGC)n Simple_repeat Simple_repeat 4 74 0 1 707 258 222 0 16 chrX 16030160 16030224 -6392603 + (TCCA)n Simple_repeat Simple_repeat 2 64 0 1 707 220 191 24 0 chrX 16031140 16031182 -6391645 + (CTGGGG)n Simple_repeat Simple_repeat 2 44 0 1 707 195 42 0 0 chrX 16032801 16032825 -6390002 + (A)n Simple_repeat Simple_repeat 1 24 0 1 707 21 0 0 0 chrX 16032883 16032904 -6389923 + AT_rich Low_complexity Low_complexity 1 21 0 1 707 219 103 0 0 chrX 16034358 16034397 -6388430 + (T)n Simple_repeat Simple_repeat 1 39 0 1 707 213 39 0 0 chrX 16035202 16035228 -6387599 + (A)n Simple_repeat Simple_repeat 1 26 0 1 707 183 162 0 0 chrX 16035825 16035862 -6386965 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 1 707 213 163 0 0 chrX 16036538 16036587 -6386240 + (CAA)n Simple_repeat Simple_repeat 1 49 0 1 707 326 333 0 0 chrX 16037441 16037537 -6385290 + G-rich Low_complexity Low_complexity 5 100 0 1 707 209 163 20 0 chrX 16039169 16039218 -6383609 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 707 189 196 0 0 chrX 16039426 16039477 -6383350 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 707 264 30 0 0 chrX 16040999 16041032 -6381795 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 707 278 259 9 18 chrX 16041761 16041875 -6380952 + (CA)n Simple_repeat Simple_repeat 2 114 0 1 707 261 197 0 0 chrX 16042028 16042094 -6380733 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 707 24 67 0 0 chrX 16042811 16042856 -6379971 + AT_rich Low_complexity Low_complexity 1 45 0 1 707 212 211 19 0 chrX 16043061 16043113 -6379714 + A-rich Low_complexity Low_complexity 5 57 0 1 707 218 217 0 0 chrX 16044279 16044325 -6378502 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 707 186 71 0 0 chrX 16044433 16044461 -6378366 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 707 270 219 0 0 chrX 16044690 16044795 -6378032 + CT-rich Low_complexity Low_complexity 2 106 0 1 707 30 59 0 0 chrX 16045225 16045276 -6377551 + AT_rich Low_complexity Low_complexity 1 51 0 1 707 219 146 0 0 chrX 16047026 16047067 -6375760 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 707 384 103 0 0 chrX 16052351 16052409 -6370418 + (CACTC)n Simple_repeat Simple_repeat 3 60 0 1 707 185 61 91 0 chrX 16054078 16054111 -6368716 - HSATII Satellite Satellite -86 84 49 1 707 357 149 0 0 chrX 16055109 16055176 -6367651 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 707 25 0 0 0 chrX 16055312 16055337 -6367490 + AT_rich Low_complexity Low_complexity 1 25 0 1 707 219 36 0 0 chrX 16056882 16056910 -6365917 + (AACTG)n Simple_repeat Simple_repeat 4 31 0 1 707 28 48 0 0 chrX 16057683 16057725 -6365102 + AT_rich Low_complexity Low_complexity 1 42 0 1 707 21 57 0 0 chrX 16059316 16059351 -6363476 + AT_rich Low_complexity Low_complexity 1 35 0 1 707 225 151 0 0 chrX 16059726 16059779 -6363048 + A-rich Low_complexity Low_complexity 1 53 0 1 707 204 97 0 0 chrX 16059856 16059887 -6362940 + (CGG)n Simple_repeat Simple_repeat 1 31 0 1 707 26 0 0 0 chrX 16059932 16059958 -6362869 + AT_rich Low_complexity Low_complexity 1 26 0 1 707 234 105 0 0 chrX 16061486 16061524 -6361303 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 1 707 22 0 0 0 chrX 16062043 16062065 -6360762 + AT_rich Low_complexity Low_complexity 1 22 0 1 707 180 0 0 0 chrX 16062084 16062104 -6360723 + (CCG)n Simple_repeat Simple_repeat 1 20 0 1 707 234 0 0 0 chrX 16063188 16063214 -6359613 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 707 207 200 0 0 chrX 16064361 16064406 -6358421 + T-rich Low_complexity Low_complexity 1 45 0 1 707 22 35 0 0 chrX 16064922 16064951 -6357876 + AT_rich Low_complexity Low_complexity 1 29 0 1 707 186 43 0 0 chrX 16064991 16065014 -6357813 + (CGAAT)n Simple_repeat Simple_repeat 5 27 0 1 707 249 83 0 0 chrX 16066093 16066129 -6356698 + (CATATA)n Simple_repeat Simple_repeat 4 39 0 1 707 25 51 0 0 chrX 16067428 16067467 -6355360 + AT_rich Low_complexity Low_complexity 1 39 0 1 707 261 0 0 0 chrX 16068210 16068239 -6354588 + (CATAC)n Simple_repeat Simple_repeat 4 32 0 1 707 192 97 0 0 chrX 16068242 16068273 -6354554 + (CAATC)n Simple_repeat Simple_repeat 1 31 0 1 707 31 44 0 0 chrX 16068737 16068782 -6354045 + AT_rich Low_complexity Low_complexity 1 45 0 1 707 399 137 0 0 chrX 16069247 16069320 -6353507 + (CCAA)n Simple_repeat Simple_repeat 2 74 0 1 707 278 354 0 0 chrX 16069963 16070076 -6352751 + (CAAA)n Simple_repeat Simple_repeat 4 116 0 1 707 285 51 0 0 chrX 16070569 16070608 -6352219 + (GGATG)n Simple_repeat Simple_repeat 2 40 0 1 707 22 70 0 0 chrX 16072639 16072682 -6350145 + AT_rich Low_complexity Low_complexity 1 43 0 1 707 314 143 0 16 chrX 16073284 16073348 -6349479 + (CAAAC)n Simple_repeat Simple_repeat 2 64 0 1 707 234 128 0 0 chrX 16073417 16073456 -6349371 + (ATGGTG)n Simple_repeat Simple_repeat 4 42 0 1 707 216 0 0 0 chrX 16073677 16073701 -6349126 + (TTC)n Simple_repeat Simple_repeat 2 25 0 1 707 21 57 0 0 chrX 16074655 16074690 -6348137 + AT_rich Low_complexity Low_complexity 1 35 0 1 707 201 39 0 0 chrX 16078052 16078078 -6344749 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 707 285 135 0 0 chrX 16078950 16079002 -6343825 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 707 22 0 0 0 chrX 16079071 16079093 -6343734 + AT_rich Low_complexity Low_complexity 1 22 0 1 707 183 42 0 0 chrX 16081817 16081841 -6340986 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 707 33 25 0 0 chrX 16082817 16082857 -6339970 + AT_rich Low_complexity Low_complexity 1 40 0 1 707 287 143 0 0 chrX 16082884 16082926 -6339901 + DNAREP1_DM LINE Penelope 1 42 -552 1 707 31 44 0 0 chrX 16083313 16083358 -6339469 + AT_rich Low_complexity Low_complexity 1 45 0 1 707 25 0 0 0 chrX 16085363 16085388 -6337439 + AT_rich Low_complexity Low_complexity 1 25 0 1 707 209 222 0 0 chrX 16086691 16086736 -6336091 + (CAA)n Simple_repeat Simple_repeat 3 47 0 1 707 225 108 0 0 chrX 16086855 16086892 -6335935 + (A)n Simple_repeat Simple_repeat 1 37 0 1 707 26 30 0 0 chrX 16087448 16087481 -6335346 + AT_rich Low_complexity Low_complexity 1 33 0 1 707 222 37 0 0 chrX 16088018 16088045 -6334782 + (CCCCCT)n Simple_repeat Simple_repeat 2 28 0 1 707 278 259 0 0 chrX 16088454 16088539 -6334288 + (TATATG)n Simple_repeat Simple_repeat 5 89 0 1 707 21 89 0 0 chrX 16089188 16089244 -6333583 + AT_rich Low_complexity Low_complexity 1 56 0 1 707 183 80 0 0 chrX 16089736 16089761 -6333066 + (CGAAT)n Simple_repeat Simple_repeat 3 27 0 1 707 222 118 0 0 chrX 16089846 16089880 -6332947 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 707 27 0 0 0 chrX 16092265 16092292 -6330535 + AT_rich Low_complexity Low_complexity 1 27 0 1 707 237 65 0 0 chrX 16092864 16092895 -6329932 + (TTG)n Simple_repeat Simple_repeat 1 31 0 1 707 22 56 0 0 chrX 16093342 16093378 -6329449 + AT_rich Low_complexity Low_complexity 1 36 0 1 707 228 320 0 0 chrX 16094434 16094509 -6328318 + A-rich Low_complexity Low_complexity 1 75 0 1 707 186 43 0 0 chrX 16094932 16094955 -6327872 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 1 707 21 0 0 0 chrX 16095668 16095689 -6327138 + AT_rich Low_complexity Low_complexity 1 21 0 1 707 198 0 0 0 chrX 16096470 16096492 -6326335 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 707 207 167 0 0 chrX 16097645 16097687 -6325140 + A-rich Low_complexity Low_complexity 1 42 0 1 707 192 40 0 0 chrX 16098602 16098627 -6324200 + (T)n Simple_repeat Simple_repeat 1 25 0 1 707 231 88 0 0 chrX 16100173 16100207 -6322620 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 707 203 61 30 0 chrX 16100244 16100277 -6322550 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 707 22 56 0 0 chrX 16100455 16100491 -6322336 + AT_rich Low_complexity Low_complexity 1 36 0 1 707 231 36 0 0 chrX 16100525 16100553 -6322274 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 707 231 36 0 0 chrX 16102217 16102245 -6320582 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 707 228 67 0 0 chrX 16103011 16103041 -6319786 + (CAGCT)n Simple_repeat Simple_repeat 3 32 0 1 707 213 222 0 0 chrX 16103792 16103837 -6318990 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 1 707 536 135 0 9 chrX 16104002 16104114 -6318713 + (GTATG)n Simple_repeat Simple_repeat 4 114 0 1 707 21 36 0 0 chrX 16104778 16104806 -6318021 + AT_rich Low_complexity Low_complexity 1 28 0 1 707 189 0 0 0 chrX 16105157 16105178 -6317649 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 707 192 125 0 0 chrX 16105659 16105691 -6317136 + (TGG)n Simple_repeat Simple_repeat 1 32 0 1 707 243 231 0 0 chrX 16105698 16105817 -6317010 + (CTG)n Simple_repeat Simple_repeat 1 119 0 1 707 261 272 0 0 chrX 16106292 16106373 -6316454 + CT-rich Low_complexity Low_complexity 55 135 0 1 707 201 175 0 0 chrX 16110574 16110614 -6312213 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 707 266 217 0 0 chrX 16110936 16110996 -6311831 + CT-rich Low_complexity Low_complexity 2 61 0 1 707 214 288 0 0 chrX 16111731 16111797 -6311030 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 707 195 129 0 0 chrX 16111970 16112001 -6310826 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1 707 204 40 0 0 chrX 16113764 16113789 -6309038 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 707 25 0 0 0 chrX 16113990 16114015 -6308812 + AT_rich Low_complexity Low_complexity 1 25 0 1 707 22 0 0 0 chrX 16114612 16114634 -6308193 + AT_rich Low_complexity Low_complexity 1 22 0 1 707 206 116 0 23 chrX 16115531 16115575 -6307252 + (CGTTG)n Simple_repeat Simple_repeat 2 44 0 1 707 24 0 0 0 chrX 16115966 16115990 -6306837 + AT_rich Low_complexity Low_complexity 1 24 0 1 707 195 42 0 0 chrX 16116439 16116463 -6306364 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 707 3766 0 0 0 chrX 16116865 16117293 -6305534 - ROO_LTR LTR Pao 0 428 1 1 707 6774 4 1 0 chrX 16117293 16118105 -6304722 - ROO_I LTR Pao 0 8256 7444 1 88 56542 1 2 0 chrX 16118092 16124729 -6298098 - ROO_I LTR Pao -1607 6649 1 1 708 3732 5 0 0 chrX 16124729 16125157 -6297670 - ROO_LTR LTR Pao 0 428 1 1 708 258 56 0 0 chrX 16125528 16125564 -6297263 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 708 203 0 0 36 chrX 16127003 16127031 -6295796 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 708 216 0 0 0 chrX 16128086 16128110 -6294717 + (CTG)n Simple_repeat Simple_repeat 2 25 0 1 708 25 31 0 0 chrX 16128911 16128943 -6293884 + AT_rich Low_complexity Low_complexity 1 32 0 1 708 282 73 0 0 chrX 16129657 16129698 -6293129 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1 708 201 171 0 0 chrX 16129819 16129854 -6292973 + A-rich Low_complexity Low_complexity 1 35 0 1 708 217 132 0 0 chrX 16130055 16130093 -6292734 + (A)n Simple_repeat Simple_repeat 1 38 0 1 708 26 0 0 0 chrX 16133087 16133113 -6289714 + AT_rich Low_complexity Low_complexity 1 26 0 1 708 270 0 0 0 chrX 16135016 16135046 -6287781 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1 708 25 0 0 0 chrX 16135311 16135336 -6287491 + AT_rich Low_complexity Low_complexity 1 25 0 1 708 27 0 0 0 chrX 16137387 16137414 -6285413 + AT_rich Low_complexity Low_complexity 1 27 0 1 708 280 182 0 70 chrX 16140017 16140088 -6282739 - DNAREP1_DM LINE Penelope 0 594 529 1 708 233 75 0 24 chrX 16140756 16140797 -6282030 + (AACTG)n Simple_repeat Simple_repeat 1 40 0 1 708 761 245 21 27 chrX 16141334 16141454 -6281373 + SAR_DM Satellite Satellite 576 881 -591 1 708 767 178 29 24 chrX 16141454 16141661 -6281166 - XDMR_DM Unknown Unknown -7 353 146 1 708 180 125 0 0 chrX 16142035 16142067 -6280760 + (A)n Simple_repeat Simple_repeat 1 32 0 1 708 230 53 0 123 chrX 16142534 16142599 -6280228 + (GTCTG)n Simple_repeat Simple_repeat 4 60 0 1 708 32 57 0 0 chrX 16143176 16143229 -6279598 + AT_rich Low_complexity Low_complexity 1 53 0 1 708 218 102 0 58 chrX 16145060 16145112 -6277715 + T-rich Low_complexity Low_complexity 1 49 0 1 708 195 42 0 0 chrX 16145282 16145306 -6277521 + (A)n Simple_repeat Simple_repeat 1 24 0 1 708 255 79 0 0 chrX 16145849 16145887 -6276940 + (TTCC)n Simple_repeat Simple_repeat 1 38 0 1 708 26 50 0 0 chrX 16146175 16146215 -6276612 + AT_rich Low_complexity Low_complexity 1 40 0 1 708 408 201 118 69 chrX 16148299 16148443 -6274384 - DNAREP1_DM LINE Penelope -36 558 408 1 708 476 117 0 13 chrX 16149104 16149182 -6273645 - DNAREP1_DM LINE Penelope -517 77 1 1 708 340 166 354 43 chrX 16156309 16156473 -6266354 - DNAREP1_DM LINE Penelope 0 594 380 1 708 203 147 0 0 chrX 16157261 16157295 -6265532 + (CAGC)n Simple_repeat Simple_repeat 4 37 0 1 708 216 163 0 0 chrX 16157902 16157945 -6264882 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 708 22 0 0 0 chrX 16161084 16161106 -6261721 + AT_rich Low_complexity Low_complexity 1 22 0 1 708 246 32 0 0 chrX 16162244 16162275 -6260552 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 1 708 1760 152 35 6 chrX 16163454 16163799 -6259028 + XDMR Unknown Unknown 7 361 0 1 708 899 259 47 31 chrX 16163799 16163939 -6258888 - SAR_DM Satellite Satellite -400 1067 575 1 708 671 163 0 21 chrX 16163829 16163973 -6258854 + XDMR_DM Unknown Unknown 1 141 -219 1 708 23 33 0 0 chrX 16168851 16168881 -6253946 + AT_rich Low_complexity Low_complexity 1 30 0 1 708 206 174 0 21 chrX 16169055 16169102 -6253725 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1 708 51 86 0 0 chrX 16170019 16170147 -6252680 + AT_rich Low_complexity Low_complexity 1 128 0 1 708 22 0 0 0 chrX 16170179 16170201 -6252626 + AT_rich Low_complexity Low_complexity 1 22 0 1 708 233 200 0 0 chrX 16171294 16171339 -6251488 + GA-rich Low_complexity Low_complexity 2 46 0 1 708 207 146 0 0 chrX 16172712 16172753 -6250074 + (CGAAT)n Simple_repeat Simple_repeat 1 41 0 1 708 216 67 0 0 chrX 16175368 16175398 -6247429 + (CAAAT)n Simple_repeat Simple_repeat 3 32 0 1 708 195 42 0 0 chrX 16176174 16176198 -6246629 + (TCCG)n Simple_repeat Simple_repeat 4 27 0 1 708 183 156 0 0 chrX 16183290 16183322 -6239505 + (CGG)n Simple_repeat Simple_repeat 2 33 0 1 708 210 162 0 0 chrX 16185848 16185885 -6236942 + A-rich Low_complexity Low_complexity 1 37 0 1 708 192 158 0 0 chrX 16185990 16186028 -6236799 + (CGG)n Simple_repeat Simple_repeat 2 39 0 1 708 314 251 0 17 chrX 16186422 16186596 -6236231 + (CGG)n Simple_repeat Simple_repeat 2 172 0 1 708 183 186 0 0 chrX 16186953 16186996 -6235831 + (CGG)n Simple_repeat Simple_repeat 3 45 0 1 708 296 368 6 6 chrX 16187029 16187185 -6235642 + (CGG)n Simple_repeat Simple_repeat 1 156 0 1 708 305 109 0 18 chrX 16187488 16187544 -6235283 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 708 25 83 0 0 chrX 16187871 16187931 -6234896 + AT_rich Low_complexity Low_complexity 1 60 0 1 708 21 36 0 0 chrX 16189677 16189705 -6233122 + AT_rich Low_complexity Low_complexity 1 28 0 1 708 23 68 0 0 chrX 16197469 16197513 -6225314 + AT_rich Low_complexity Low_complexity 1 44 0 1 708 48 53 0 0 chrX 16197721 16197797 -6225030 + AT_rich Low_complexity Low_complexity 1 76 0 1 708 21 57 0 0 chrX 16204144 16204179 -6218648 + AT_rich Low_complexity Low_complexity 1 35 0 1 708 21 0 0 0 chrX 16214554 16214575 -6208252 + AT_rich Low_complexity Low_complexity 1 21 0 1 708 24 96 0 0 chrX 16214914 16214987 -6207840 + AT_rich Low_complexity Low_complexity 1 73 0 1 708 31 26 0 0 chrX 16215117 16215155 -6207672 + AT_rich Low_complexity Low_complexity 1 38 0 1 708 207 162 0 0 chrX 16219241 16219278 -6203549 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1 708 221 265 29 19 chrX 16219388 16219492 -6203335 + (TA)n Simple_repeat Simple_repeat 1 105 0 1 708 210 176 0 0 chrX 16222159 16222210 -6200617 + (ATG)n Simple_repeat Simple_repeat 2 52 0 1 708 206 32 32 0 chrX 16222397 16222428 -6200399 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 708 21 36 0 0 chrX 16226421 16226449 -6196378 + AT_rich Low_complexity Low_complexity 1 28 0 1 708 29 70 0 0 chrX 16226494 16226551 -6196276 + AT_rich Low_complexity Low_complexity 1 57 0 1 708 23 0 0 0 chrX 16226593 16226616 -6196211 + AT_rich Low_complexity Low_complexity 1 23 0 1 708 186 103 0 0 chrX 16228483 16228512 -6194315 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 708 24 0 0 0 chrX 16229320 16229344 -6193483 + AT_rich Low_complexity Low_complexity 1 24 0 1 708 218 204 0 0 chrX 16230335 16230379 -6192448 + (CAA)n Simple_repeat Simple_repeat 1 44 0 1 708 388 158 0 19 chrX 16230665 16230768 -6192059 + ROO_I LTR Pao 641 741 -7515 1 708 207 176 0 0 chrX 16231796 16231830 -6190997 + (CGA)n Simple_repeat Simple_repeat 3 36 0 1 708 21 0 0 0 chrX 16231950 16231971 -6190856 + AT_rich Low_complexity Low_complexity 1 21 0 1 708 183 100 0 0 chrX 16232109 16232139 -6190688 + (T)n Simple_repeat Simple_repeat 1 30 0 1 708 34 0 0 0 chrX 16232582 16232616 -6190211 + AT_rich Low_complexity Low_complexity 1 34 0 1 708 465 144 0 0 chrX 16233823 16233913 -6188914 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 708 3766 0 0 0 chrX 16234755 16235183 -6187644 - ROO_LTR LTR Pao 0 428 1 1 708 70307 0 2 0 chrX 16235183 16243426 -6179401 - ROO_I LTR Pao 0 8256 1 1 708 3766 0 0 0 chrX 16243426 16243854 -6178973 - ROO_LTR LTR Pao 0 428 1 1 708 228 259 0 0 chrX 16252727 16252785 -6170042 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 709 206 130 18 36 chrX 16253117 16253173 -6169654 + (TAA)n Simple_repeat Simple_repeat 2 56 0 1 709 21 0 0 0 chrX 16255711 16255732 -6167095 + AT_rich Low_complexity Low_complexity 1 21 0 1 709 222 91 0 0 chrX 16257792 16257825 -6165002 + (TGG)n Simple_repeat Simple_repeat 2 34 0 1 709 28 0 0 0 chrX 16260584 16260612 -6162215 + AT_rich Low_complexity Low_complexity 1 28 0 1 709 183 80 0 0 chrX 16261527 16261552 -6161275 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 1 709 32 26 0 0 chrX 16262313 16262352 -6160475 + AT_rich Low_complexity Low_complexity 1 39 0 1 709 267 156 0 0 chrX 16262987 16263032 -6159795 + DNAREP1_DM LINE Penelope 549 593 -1 1 709 222 62 0 0 chrX 16263312 16263344 -6159483 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 709 26 0 0 0 chrX 16263647 16263673 -6159154 + AT_rich Low_complexity Low_complexity 1 26 0 1 709 24 0 0 0 chrX 16264526 16264550 -6158277 + AT_rich Low_complexity Low_complexity 1 24 0 1 709 24 0 0 0 chrX 16264648 16264672 -6158155 + AT_rich Low_complexity Low_complexity 1 24 0 1 709 24 0 0 0 chrX 16265240 16265264 -6157563 + AT_rich Low_complexity Low_complexity 1 24 0 1 709 31 26 0 0 chrX 16265953 16265991 -6156836 + AT_rich Low_complexity Low_complexity 1 38 0 1 709 21 0 0 0 chrX 16266073 16266094 -6156733 + AT_rich Low_complexity Low_complexity 1 21 0 1 709 26 0 0 0 chrX 16266199 16266225 -6156602 + AT_rich Low_complexity Low_complexity 1 26 0 1 709 203 267 0 0 chrX 16266963 16267023 -6155804 + (TATG)n Simple_repeat Simple_repeat 4 63 0 1 709 195 129 0 0 chrX 16268118 16268149 -6154678 + (CATA)n Simple_repeat Simple_repeat 4 34 0 1 709 247 279 0 0 chrX 16268630 16268691 -6154136 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 1 709 225 0 0 0 chrX 16269539 16269564 -6153263 + (CAT)n Simple_repeat Simple_repeat 1 25 0 1 709 339 44 0 0 chrX 16275339 16275384 -6147443 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 1 709 26 64 0 0 chrX 16275510 16275557 -6147270 + AT_rich Low_complexity Low_complexity 1 47 0 1 709 24 77 0 0 chrX 16275751 16275803 -6147024 + AT_rich Low_complexity Low_complexity 1 52 0 1 709 219 69 0 0 chrX 16278300 16278329 -6144498 + (TATG)n Simple_repeat Simple_repeat 1 29 0 1 709 210 315 31 16 chrX 16278376 16278505 -6144322 + (CATA)n Simple_repeat Simple_repeat 2 132 0 1 709 21 71 0 0 chrX 16280921 16280963 -6141864 + AT_rich Low_complexity Low_complexity 1 42 0 1 709 27 29 0 0 chrX 16285617 16285651 -6137176 + AT_rich Low_complexity Low_complexity 1 34 0 1 709 199 26 50 50 chrX 16288661 16288701 -6134126 + (TTTTA)n Simple_repeat Simple_repeat 3 42 0 1 709 269 135 19 0 chrX 16299371 16299423 -6123404 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 709 189 0 0 0 chrX 16299872 16299893 -6122934 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 709 21 0 0 0 chrX 16299906 16299927 -6122900 + AT_rich Low_complexity Low_complexity 1 21 0 1 709 243 133 0 0 chrX 16300845 16300890 -6121937 + (A)n Simple_repeat Simple_repeat 1 45 0 1 709 255 61 0 0 chrX 16302802 16302835 -6119992 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 709 22 0 0 0 chrX 16302952 16302974 -6119853 + AT_rich Low_complexity Low_complexity 1 22 0 1 709 29 28 0 0 chrX 16304051 16304087 -6118740 + AT_rich Low_complexity Low_complexity 1 36 0 1 709 22 0 0 0 chrX 16314603 16314625 -6108202 + AT_rich Low_complexity Low_complexity 1 22 0 1 709 327 85 0 0 chrX 16314746 16314793 -6108034 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 709 240 253 0 0 chrX 16317324 16317399 -6105428 + (CAG)n Simple_repeat Simple_repeat 3 77 0 1 709 200 237 17 0 chrX 16318069 16318128 -6104699 + (CAAA)n Simple_repeat Simple_repeat 2 61 0 1 709 231 288 0 0 chrX 16318432 16318505 -6104322 + CT-rich Low_complexity Low_complexity 2 74 0 1 709 208 206 0 0 chrX 16318560 16318594 -6104233 + (CCG)n Simple_repeat Simple_repeat 2 35 0 1 709 203 130 65 0 chrX 16319932 16319978 -6102849 + (CGA)n Simple_repeat Simple_repeat 1 49 0 1 709 270 0 0 0 chrX 16321237 16321267 -6101560 + (TATG)n Simple_repeat Simple_repeat 3 32 0 1 709 21 57 0 0 chrX 16322224 16322259 -6100568 + AT_rich Low_complexity Low_complexity 1 35 0 1 709 219 139 0 0 chrX 16322479 16322515 -6100312 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 709 180 158 0 0 chrX 16323623 16323661 -6099166 + (CAG)n Simple_repeat Simple_repeat 1 38 0 1 709 295 255 29 0 chrX 16323693 16323795 -6099032 + ROO_I LTR Pao 639 743 -7513 1 709 23 0 0 0 chrX 16324862 16324885 -6097942 + AT_rich Low_complexity Low_complexity 1 23 0 1 709 190 56 27 27 chrX 16329209 16329246 -6093581 + (CAA)n Simple_repeat Simple_repeat 1 37 0 1 709 273 250 13 0 chrX 16329291 16329367 -6093460 + (CAG)n Simple_repeat Simple_repeat 1 77 0 1 709 351 340 0 18 chrX 16329881 16330046 -6092781 + (CGA)n Simple_repeat Simple_repeat 1 162 0 1 709 314 312 0 0 chrX 16330113 16330225 -6092602 + (CGA)n Simple_repeat Simple_repeat 2 113 0 1 709 241 94 0 54 chrX 16330681 16330737 -6092090 + (CAG)n Simple_repeat Simple_repeat 1 53 0 1 709 240 86 0 0 chrX 16331290 16331325 -6091502 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 709 237 33 0 0 chrX 16331511 16331541 -6091286 + (A)n Simple_repeat Simple_repeat 1 30 0 1 709 180 77 0 0 chrX 16339591 16339617 -6083210 + (TCC)n Simple_repeat Simple_repeat 2 27 0 1 709 448 176 14 33 chrX 16341164 16341296 -6081531 - XDMR Unknown Unknown -233 128 2 1 709 497 201 79 0 chrX 16341298 16341437 -6081390 + SAR_DM Satellite Satellite 733 882 -590 1 709 21 0 0 0 chrX 16342763 16342784 -6080043 + AT_rich Low_complexity Low_complexity 1 21 0 1 709 298 107 36 0 chrX 16343052 16343108 -6079719 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 709 241 271 0 0 chrX 16344350 16344409 -6078418 + (CGG)n Simple_repeat Simple_repeat 2 60 0 1 709 225 0 0 0 chrX 16344655 16344680 -6078147 + (CCAA)n Simple_repeat Simple_repeat 4 28 0 1 709 222 37 0 0 chrX 16346243 16346270 -6076557 + (GGA)n Simple_repeat Simple_repeat 1 27 0 1 709 250 26 0 49 chrX 16346631 16346672 -6076155 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 709 209 132 25 62 chrX 16346797 16346878 -6075949 + A-rich Low_complexity Low_complexity 3 80 0 1 709 216 188 0 0 chrX 16346947 16346995 -6075832 + A-rich Low_complexity Low_complexity 1 48 0 1 709 198 91 0 0 chrX 16347086 16347119 -6075708 + (A)n Simple_repeat Simple_repeat 1 33 0 1 709 387 137 0 0 chrX 16347872 16347945 -6074882 + (CAATC)n Simple_repeat Simple_repeat 2 74 0 1 709 210 194 0 0 chrX 16348183 16348245 -6074582 + A-rich Low_complexity Low_complexity 1 62 0 1 709 213 94 0 0 chrX 16348886 16348918 -6073909 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 709 22 35 0 0 chrX 16348975 16349004 -6073823 + AT_rich Low_complexity Low_complexity 1 29 0 1 709 241 284 0 47 chrX 16349383 16349531 -6073296 + T-rich Low_complexity Low_complexity 3 143 0 1 709 183 203 0 0 chrX 16349583 16349642 -6073185 + T-rich Low_complexity Low_complexity 1 59 0 1 709 255 152 0 0 chrX 16350143 16350189 -6072638 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 709 342 143 0 0 chrX 16350268 16350331 -6072496 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 709 236 137 20 0 chrX 16350435 16350486 -6072341 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 709 183 167 0 0 chrX 16350515 16350557 -6072270 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 709 201 147 0 0 chrX 16351482 16351516 -6071311 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 709 228 35 0 0 chrX 16352051 16352080 -6070747 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 709 214 286 11 43 chrX 16352297 16352483 -6070344 + T-rich Low_complexity Low_complexity 1 180 0 1 709 204 135 0 0 chrX 16352867 16352904 -6069923 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 709 224 248 0 45 chrX 16353005 16353115 -6069712 + T-rich Low_complexity Low_complexity 3 107 0 1 709 183 42 0 0 chrX 16353588 16353612 -6069215 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 709 264 77 0 0 chrX 16356364 16356403 -6066424 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 709 239 179 15 0 chrX 16356654 16356721 -6066106 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 709 180 143 0 0 chrX 16357270 16357312 -6065515 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 709 187 125 13 53 chrX 16357570 16357646 -6065181 + (TTG)n Simple_repeat Simple_repeat 3 75 0 1 709 246 207 0 0 chrX 16357957 16358015 -6064812 + (CCG)n Simple_repeat Simple_repeat 3 60 0 1 709 25 0 0 0 chrX 16360958 16360983 -6061844 + AT_rich Low_complexity Low_complexity 1 25 0 1 709 188 32 97 0 chrX 16361321 16361352 -6061475 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 1 709 195 100 0 0 chrX 16363064 16363094 -6059733 + (T)n Simple_repeat Simple_repeat 1 30 0 1 709 213 130 65 0 chrX 16363234 16363280 -6059547 + T-rich Low_complexity Low_complexity 1 49 0 1 709 24 32 0 0 chrX 16363990 16364021 -6058806 + AT_rich Low_complexity Low_complexity 1 31 0 1 709 218 265 0 0 chrX 16369574 16369642 -6053185 + T-rich Low_complexity Low_complexity 3 70 0 1 709 213 39 0 0 chrX 16369969 16369995 -6052832 + (CGAGG)n Simple_repeat Simple_repeat 5 30 0 1 709 25 31 0 0 chrX 16370190 16370222 -6052605 + AT_rich Low_complexity Low_complexity 1 32 0 1 709 315 96 0 0 chrX 16370742 16370794 -6052033 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 709 205 130 0 85 chrX 16371395 16371454 -6051373 + (GTTTG)n Simple_repeat Simple_repeat 1 54 0 1 709 183 42 0 0 chrX 16371743 16371767 -6051060 + (T)n Simple_repeat Simple_repeat 1 24 0 1 709 216 0 0 0 chrX 16372533 16372557 -6050270 + (CGAAA)n Simple_repeat Simple_repeat 5 28 0 1 709 264 130 0 0 chrX 16374497 16374543 -6048284 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 709 201 182 0 0 chrX 16374636 16374691 -6048136 + GA-rich Low_complexity Low_complexity 1 55 0 1 709 189 154 0 0 chrX 16375789 16375828 -6046999 + CT-rich Low_complexity Low_complexity 2 40 0 1 709 24 0 0 0 chrX 16376579 16376603 -6046224 + AT_rich Low_complexity Low_complexity 1 24 0 1 709 180 0 0 0 chrX 16376624 16376644 -6046183 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 709 217 233 0 0 chrX 16377139 16377199 -6045628 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 709 259 237 25 34 chrX 16377199 16377317 -6045510 + T-rich Low_complexity Low_complexity 4 120 0 1 709 212 224 38 50 chrX 16378202 16378282 -6044545 + (ATTTG)n Simple_repeat Simple_repeat 5 83 0 1 709 227 31 0 30 chrX 16382092 16382125 -6040702 + (ATTTG)n Simple_repeat Simple_repeat 2 33 0 1 709 233 135 0 19 chrX 16382221 16382274 -6040553 + (ATTTG)n Simple_repeat Simple_repeat 5 56 0 1 88 280 258 0 0 chrX 16383987 16384076 -6038751 + T-rich Low_complexity Low_complexity 1 89 0 1 710 207 188 0 0 chrX 16385556 16385604 -6037223 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 710 31 26 0 0 chrX 16385656 16385694 -6037133 + AT_rich Low_complexity Low_complexity 1 38 0 1 710 2295 4 0 0 chrX 16386733 16387000 -6035827 - MDG3_LTR LTR Gypsy 0 267 1 1 710 42981 0 0 0 chrX 16387000 16391987 -6030840 - MDG3_I LTR Gypsy 0 4986 1 1 710 2452 4 0 0 chrX 16391986 16392253 -6030574 - MDG3_LTR LTR Gypsy 0 267 1 1 710 183 42 0 0 chrX 16394504 16394528 -6028299 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 710 183 42 0 0 chrX 16394768 16394792 -6028035 + (T)n Simple_repeat Simple_repeat 1 24 0 1 710 228 227 0 0 chrX 16395635 16395723 -6027104 + GA-rich Low_complexity Low_complexity 2 89 0 1 710 189 74 0 0 chrX 16395843 16395870 -6026957 + (CGAG)n Simple_repeat Simple_repeat 2 28 0 1 710 180 200 0 0 chrX 16396264 16396309 -6026518 + (ATTCG)n Simple_repeat Simple_repeat 4 48 0 1 710 243 103 0 0 chrX 16397920 16397959 -6024868 + (CGGAA)n Simple_repeat Simple_repeat 3 41 0 1 710 252 111 0 0 chrX 16398631 16398676 -6024151 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 710 284 252 8 23 chrX 16399098 16399228 -6023599 + (CATATA)n Simple_repeat Simple_repeat 4 131 0 1 710 231 250 0 0 chrX 16399452 16399508 -6023319 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 710 192 97 0 0 chrX 16400624 16400655 -6022172 + (ATTCG)n Simple_repeat Simple_repeat 4 34 0 1 710 246 32 0 0 chrX 16401076 16401107 -6021720 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 1 710 222 62 0 0 chrX 16402017 16402049 -6020778 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 710 26 0 0 0 chrX 16402477 16402503 -6020324 + AT_rich Low_complexity Low_complexity 1 26 0 1 710 23 33 0 0 chrX 16403042 16403072 -6019755 + AT_rich Low_complexity Low_complexity 1 30 0 1 710 28 0 0 0 chrX 16403819 16403847 -6018980 + AT_rich Low_complexity Low_complexity 1 28 0 1 710 217 231 0 0 chrX 16405415 16405467 -6017360 + CT-rich Low_complexity Low_complexity 1 52 0 1 710 281 149 15 0 chrX 16405597 16405664 -6017163 + (CATCC)n Simple_repeat Simple_repeat 4 71 0 1 710 258 32 0 0 chrX 16406509 16406540 -6016287 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 710 233 109 22 0 chrX 16406969 16407015 -6015812 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 710 269 211 13 26 chrX 16408448 16408526 -6014301 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 710 200 31 0 59 chrX 16409147 16409181 -6013646 + (CATAC)n Simple_repeat Simple_repeat 3 34 0 1 710 183 129 0 0 chrX 16411310 16411341 -6011486 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 710 222 180 0 32 chrX 16412972 16413035 -6009792 + T-rich Low_complexity Low_complexity 4 64 0 1 710 213 132 0 0 chrX 16414512 16414550 -6008277 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1 710 198 156 0 0 chrX 16414963 16415008 -6007819 + GA-rich Low_complexity Low_complexity 2 46 0 1 710 26 30 0 0 chrX 16415972 16416005 -6006822 + AT_rich Low_complexity Low_complexity 1 33 0 1 710 259 308 0 18 chrX 16416629 16416772 -6006055 - DMRT1B LINE R1 -1421 3762 3707 1 710 285 279 0 0 chrX 16416874 16416953 -6005874 - DMRT1C LINE R1 -4902 541 463 1 710 484 119 7 43 chrX 16417041 16417181 -6005646 + (TG)n Simple_repeat Simple_repeat 2 136 0 1 710 702 198 0 0 chrX 16417502 16417679 -6005148 + CT-rich Low_complexity Low_complexity 2 178 0 1 710 288 158 0 0 chrX 16419702 16419759 -6003068 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 710 186 43 0 0 chrX 16420496 16420519 -6002308 + (CTCTG)n Simple_repeat Simple_repeat 2 24 0 1 710 251 210 20 20 chrX 16421356 16421458 -6001369 - ROO_I LTR Pao -7513 743 642 1 710 302 195 0 12 chrX 16421463 16421546 -6001281 + (TTG)n Simple_repeat Simple_repeat 3 84 0 1 710 413 110 14 0 chrX 16421594 16421667 -6001160 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 710 197 144 35 35 chrX 16421719 16421805 -6001022 + T-rich Low_complexity Low_complexity 3 88 0 1 710 28 29 0 0 chrX 16422333 16422368 -6000459 + AT_rich Low_complexity Low_complexity 1 35 0 1 710 189 0 0 0 chrX 16423436 16423457 -5999370 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 710 225 0 0 0 chrX 16425540 16425565 -5997262 + (ACTG)n Simple_repeat Simple_repeat 4 28 0 1 710 189 121 0 0 chrX 16425572 16425605 -5997222 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 710 212 143 0 0 chrX 16425658 16425693 -5997134 + (AGTTG)n Simple_repeat Simple_repeat 2 36 0 1 710 189 154 0 0 chrX 16426190 16426229 -5996598 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 710 384 111 0 0 chrX 16426738 16426801 -5996026 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 710 28 0 0 0 chrX 16426938 16426966 -5995861 + AT_rich Low_complexity Low_complexity 1 28 0 1 710 207 173 0 0 chrX 16426989 16427041 -5995786 + T-rich Low_complexity Low_complexity 1 52 0 1 710 21 71 0 0 chrX 16427923 16427965 -5994862 + AT_rich Low_complexity Low_complexity 1 42 0 1 710 192 97 0 0 chrX 16428395 16428426 -5994401 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 710 186 233 0 0 chrX 16428720 16428780 -5994047 + CT-rich Low_complexity Low_complexity 1 60 0 1 710 243 257 0 0 chrX 16428895 16428965 -5993862 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 710 240 343 15 0 chrX 16429608 16429742 -5993085 + XDMR Unknown Unknown 29 164 -197 1 710 23 0 0 0 chrX 16430593 16430616 -5992211 + AT_rich Low_complexity Low_complexity 1 23 0 1 710 31 44 0 0 chrX 16430660 16430705 -5992122 + AT_rich Low_complexity Low_complexity 1 45 0 1 710 198 0 0 0 chrX 16432341 16432363 -5990464 + (TATG)n Simple_repeat Simple_repeat 4 25 0 1 710 451 69 28 0 chrX 16432733 16432805 -5990022 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 710 25 31 0 0 chrX 16435155 16435187 -5987640 + AT_rich Low_complexity Low_complexity 1 32 0 1 710 2098 129 256 19 chrX 16435514 16435600 -5987227 - DNAREP1_DM LINE Penelope 0 594 509 1 710 189 0 0 0 chrX 16435600 16435621 -5987206 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 710 2098 129 256 19 chrX 16435621 16436014 -5986813 - DNAREP1_DM LINE Penelope -86 508 3 1 710 1106 175 193 45 chrX 16441776 16442174 -5980653 - DNAREP1_DM LINE Penelope -9 585 2 1 710 216 213 0 21 chrX 16442321 16442369 -5980458 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 1 710 180 0 0 0 chrX 16442702 16442722 -5980105 + (TCTCTG)n Simple_repeat Simple_repeat 4 23 0 1 710 203 184 0 0 chrX 16442849 16442887 -5979940 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 710 198 71 0 0 chrX 16444586 16444614 -5978213 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1 710 24 0 0 0 chrX 16445120 16445144 -5977683 + AT_rich Low_complexity Low_complexity 1 24 0 1 710 21 0 0 0 chrX 16445607 16445628 -5977199 + AT_rich Low_complexity Low_complexity 1 21 0 1 710 22 0 0 0 chrX 16445878 16445900 -5976927 + AT_rich Low_complexity Low_complexity 1 22 0 1 710 28 0 0 0 chrX 16446660 16446688 -5976139 + AT_rich Low_complexity Low_complexity 1 28 0 1 710 25 51 0 0 chrX 16448064 16448103 -5974724 + AT_rich Low_complexity Low_complexity 1 39 0 1 710 22 0 0 0 chrX 16448600 16448622 -5974205 + AT_rich Low_complexity Low_complexity 1 22 0 1 710 27 29 0 0 chrX 16449125 16449159 -5973668 + AT_rich Low_complexity Low_complexity 1 34 0 1 710 21 57 0 0 chrX 16449852 16449887 -5972940 + AT_rich Low_complexity Low_complexity 1 35 0 1 710 206 136 0 106 chrX 16450571 16450637 -5972190 + T-rich Low_complexity Low_complexity 2 60 0 1 710 30 27 0 0 chrX 16450750 16450787 -5972040 + AT_rich Low_complexity Low_complexity 1 37 0 1 710 202 276 17 17 chrX 16453276 16453335 -5969492 + (CTG)n Simple_repeat Simple_repeat 2 60 0 1 710 254 234 0 0 chrX 16453546 16453610 -5969217 + CT-rich Low_complexity Low_complexity 5 68 0 1 710 186 43 0 0 chrX 16453653 16453676 -5969151 + (CTCA)n Simple_repeat Simple_repeat 4 26 0 1 710 295 167 14 0 chrX 16453694 16453766 -5969061 - ROO_I LTR Pao -7528 728 656 1 710 214 159 14 14 chrX 16454779 16454849 -5967978 + T-rich Low_complexity Low_complexity 5 74 0 1 710 30 27 0 0 chrX 16455357 16455394 -5967433 + AT_rich Low_complexity Low_complexity 1 37 0 1 710 289 264 0 0 chrX 16455425 16455512 -5967315 + T-rich Low_complexity Low_complexity 1 87 0 1 710 345 62 0 0 chrX 16456490 16456538 -5966289 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 710 452 72 14 0 chrX 16457073 16457142 -5965685 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 710 183 80 0 0 chrX 16457776 16457801 -5965026 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 710 25 51 0 0 chrX 16458211 16458250 -5964577 + AT_rich Low_complexity Low_complexity 1 39 0 1 710 25 31 0 0 chrX 16458308 16458340 -5964487 + AT_rich Low_complexity Low_complexity 1 32 0 1 710 186 133 0 0 chrX 16458353 16458383 -5964444 + (TATATG)n Simple_repeat Simple_repeat 3 32 0 1 710 21 82 0 0 chrX 16458393 16458442 -5964385 + AT_rich Low_complexity Low_complexity 1 49 0 1 710 215 167 24 0 chrX 16458502 16458544 -5964283 + (CTATT)n Simple_repeat Simple_repeat 4 46 0 1 710 231 60 39 20 chrX 16459035 16459086 -5963741 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 710 189 107 0 0 chrX 16459171 16459199 -5963628 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1 710 209 183 100 0 chrX 16459205 16459265 -5963562 + T-rich Low_complexity Low_complexity 4 69 0 1 710 189 94 0 0 chrX 16459473 16459505 -5963322 + (T)n Simple_repeat Simple_repeat 1 32 0 1 710 202 140 0 23 chrX 16459521 16459565 -5963262 + CT-rich Low_complexity Low_complexity 2 44 0 1 710 35 24 0 0 chrX 16459707 16459749 -5963078 + AT_rich Low_complexity Low_complexity 1 42 0 1 710 254 148 19 0 chrX 16459871 16459925 -5962902 + (TTG)n Simple_repeat Simple_repeat 3 57 0 1 710 420 20 0 0 chrX 16460154 16460203 -5962624 + (TCC)n Simple_repeat Simple_repeat 1 49 0 1 710 207 80 0 74 chrX 16461988 16462042 -5960785 + (CTG)n Simple_repeat Simple_repeat 2 51 0 1 710 234 0 0 0 chrX 16462633 16462659 -5960168 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 710 213 121 0 0 chrX 16462814 16462847 -5959980 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 1 710 693 36 0 0 chrX 16463742 16463826 -5959001 + (ACTG)n Simple_repeat Simple_repeat 3 86 0 1 710 234 191 0 0 chrX 16464779 16464826 -5958001 + A-rich Low_complexity Low_complexity 1 47 0 1 710 195 69 0 0 chrX 16467283 16467312 -5955515 + (A)n Simple_repeat Simple_repeat 1 29 0 1 710 200 224 0 15 chrX 16467738 16467806 -5955021 + (CGAAA)n Simple_repeat Simple_repeat 3 69 0 1 710 234 62 0 0 chrX 16468943 16468975 -5953852 + (A)n Simple_repeat Simple_repeat 1 32 0 1 710 207 0 0 0 chrX 16469406 16469429 -5953398 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 710 234 136 0 0 chrX 16469565 16469609 -5953218 + (T)n Simple_repeat Simple_repeat 1 44 0 1 710 180 111 0 0 chrX 16470694 16470721 -5952106 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 710 285 151 0 0 chrX 16473372 16473425 -5949402 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 710 249 33 0 0 chrX 16473690 16473720 -5949107 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 710 321 125 0 0 chrX 16473866 16473922 -5948905 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 710 185 0 0 39 chrX 16474448 16474474 -5948353 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 710 223 272 49 12 chrX 16474908 16474990 -5947837 + (TCTCTG)n Simple_repeat Simple_repeat 3 87 0 1 710 322 272 0 17 chrX 16476123 16476239 -5946588 + GA-rich Low_complexity Low_complexity 1 114 0 1 710 189 0 0 0 chrX 16476500 16476521 -5946306 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 710 24 0 0 0 chrX 16477199 16477223 -5945604 + AT_rich Low_complexity Low_complexity 1 24 0 1 710 21 0 0 0 chrX 16478138 16478159 -5944668 + AT_rich Low_complexity Low_complexity 1 21 0 1 710 23 33 0 0 chrX 16478757 16478787 -5944040 + AT_rich Low_complexity Low_complexity 1 30 0 1 710 235 226 0 46 chrX 16479540 16479605 -5943222 + GA-rich Low_complexity Low_complexity 2 63 0 1 710 22 0 0 0 chrX 16479857 16479879 -5942948 + AT_rich Low_complexity Low_complexity 1 22 0 1 710 201 74 0 0 chrX 16479967 16479994 -5942833 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 710 239 324 0 0 chrX 16480688 16480776 -5942051 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 710 24 32 0 0 chrX 16487570 16487601 -5935226 + AT_rich Low_complexity Low_complexity 1 31 0 1 710 23 68 0 0 chrX 16489131 16489175 -5933652 + AT_rich Low_complexity Low_complexity 1 44 0 1 710 213 132 0 0 chrX 16489465 16489503 -5933324 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 710 223 193 17 34 chrX 16492505 16492564 -5930263 + (CAA)n Simple_repeat Simple_repeat 1 58 0 1 710 22 0 0 0 chrX 16493158 16493180 -5929647 + AT_rich Low_complexity Low_complexity 1 22 0 1 710 186 43 0 0 chrX 16494280 16494303 -5928524 + (GGA)n Simple_repeat Simple_repeat 2 24 0 1 710 275 253 0 0 chrX 16494799 16494882 -5927945 + GA-rich Low_complexity Low_complexity 2 84 0 1 710 231 188 0 0 chrX 16495616 16495664 -5927163 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1 710 223 214 18 0 chrX 16500430 16500486 -5922341 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 710 221 139 23 0 chrX 16501664 16501707 -5921120 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 710 225 0 0 0 chrX 16502121 16502146 -5920681 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 710 180 97 0 0 chrX 16502220 16502251 -5920576 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 710 22 88 0 0 chrX 16504333 16504390 -5918437 + AT_rich Low_complexity Low_complexity 1 57 0 1 710 246 241 0 0 chrX 16504946 16505000 -5917827 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 710 201 228 0 34 chrX 16505013 16505072 -5917755 + (TTG)n Simple_repeat Simple_repeat 2 58 0 1 710 222 37 0 0 chrX 16506043 16506070 -5916757 + (CAG)n Simple_repeat Simple_repeat 1 27 0 1 710 222 37 0 0 chrX 16508378 16508405 -5914422 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 710 201 74 0 0 chrX 16508540 16508567 -5914260 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 710 273 75 0 0 chrX 16509081 16509121 -5913706 + (ATTG)n Simple_repeat Simple_repeat 3 42 0 1 710 209 167 37 0 chrX 16509255 16509309 -5913518 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 710 212 192 19 19 chrX 16509418 16509471 -5913356 + G-rich Low_complexity Low_complexity 6 58 0 1 710 43 0 0 0 chrX 16510385 16510428 -5912399 + AT_rich Low_complexity Low_complexity 1 43 0 1 710 181 30 91 0 chrX 16511417 16511450 -5911377 + (TTTTTG)n Simple_repeat Simple_repeat 6 41 0 1 710 260 244 0 73 chrX 16513060 16513184 -5909643 + T-rich Low_complexity Low_complexity 4 118 0 1 710 207 0 0 0 chrX 16513995 16514018 -5908809 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 1 710 222 37 0 0 chrX 16514148 16514175 -5908652 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 710 22 0 0 0 chrX 16514250 16514272 -5908555 + AT_rich Low_complexity Low_complexity 1 22 0 1 710 221 83 28 0 chrX 16514416 16514452 -5908375 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 710 197 65 32 0 chrX 16514819 16514850 -5907977 + (CAT)n Simple_repeat Simple_repeat 3 34 0 1 711 29 28 0 0 chrX 16515173 16515209 -5907618 + AT_rich Low_complexity Low_complexity 1 36 0 1 711 27 49 0 0 chrX 16515310 16515351 -5907476 + AT_rich Low_complexity Low_complexity 1 41 0 1 711 24 32 0 0 chrX 16515500 16515531 -5907296 + AT_rich Low_complexity Low_complexity 1 31 0 1 711 42 0 0 0 chrX 16516218 16516260 -5906567 + AT_rich Low_complexity Low_complexity 1 42 0 1 711 201 139 0 0 chrX 16516524 16516567 -5906260 + (CAATC)n Simple_repeat Simple_repeat 3 45 0 1 711 282 148 0 0 chrX 16516567 16516621 -5906206 + (AGTTG)n Simple_repeat Simple_repeat 4 57 0 1 711 23 0 0 0 chrX 16516643 16516666 -5906161 + AT_rich Low_complexity Low_complexity 1 23 0 1 711 24 53 0 0 chrX 16516951 16516989 -5905838 + AT_rich Low_complexity Low_complexity 1 38 0 1 711 31 0 0 0 chrX 16517642 16517673 -5905154 + AT_rich Low_complexity Low_complexity 1 31 0 1 711 198 0 0 0 chrX 16518128 16518150 -5904677 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 711 195 42 0 0 chrX 16518609 16518633 -5904194 + (CTA)n Simple_repeat Simple_repeat 2 25 0 1 711 242 162 0 56 chrX 16518863 16518935 -5903892 + (TTTAG)n Simple_repeat Simple_repeat 3 70 0 1 711 27 0 0 0 chrX 16519662 16519689 -5903138 + AT_rich Low_complexity Low_complexity 1 27 0 1 711 226 16 0 113 chrX 16519845 16519916 -5902911 + (TTTAG)n Simple_repeat Simple_repeat 3 65 0 1 711 276 30 0 0 chrX 16527816 16527849 -5894978 + (GAATG)n Simple_repeat Simple_repeat 2 34 0 1 711 219 69 0 0 chrX 16529073 16529102 -5893725 + (CGA)n Simple_repeat Simple_repeat 3 31 0 1 711 183 254 0 0 chrX 16530001 16530064 -5892763 + (GCTG)n Simple_repeat Simple_repeat 2 64 0 1 711 222 91 0 0 chrX 16530159 16530192 -5892635 + (CTG)n Simple_repeat Simple_repeat 3 35 0 1 711 28 29 0 0 chrX 16531766 16531801 -5891026 + AT_rich Low_complexity Low_complexity 1 35 0 1 711 183 80 0 0 chrX 16532148 16532173 -5890654 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 711 198 128 0 0 chrX 16537407 16537446 -5885381 + (CCA)n Simple_repeat Simple_repeat 3 41 0 1 711 207 0 0 0 chrX 16537676 16537699 -5885128 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 711 216 0 0 0 chrX 16537766 16537790 -5885037 + (GCTG)n Simple_repeat Simple_repeat 1 24 0 1 711 233 208 0 0 chrX 16538990 16539038 -5883789 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 1 711 207 196 0 0 chrX 16539522 16539568 -5883259 + T-rich Low_complexity Low_complexity 1 46 0 1 711 27 29 0 0 chrX 16541132 16541166 -5881661 + AT_rich Low_complexity Low_complexity 1 34 0 1 711 206 229 0 0 chrX 16542014 16542062 -5880765 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 711 315 49 0 0 chrX 16542198 16542239 -5880588 + (CATCG)n Simple_repeat Simple_repeat 2 42 0 1 711 207 176 0 0 chrX 16542572 16542606 -5880221 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 711 183 42 0 0 chrX 16542680 16542704 -5880123 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 711 31 44 0 0 chrX 16543213 16543258 -5879569 + AT_rich Low_complexity Low_complexity 1 45 0 1 711 254 183 0 14 chrX 16543392 16543464 -5879363 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 711 23 0 0 0 chrX 16543663 16543686 -5879141 + AT_rich Low_complexity Low_complexity 1 23 0 1 711 23 33 0 0 chrX 16547283 16547313 -5875514 + AT_rich Low_complexity Low_complexity 1 30 0 1 711 216 0 0 0 chrX 16559129 16559153 -5863674 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 711 321 280 0 0 chrX 16564858 16564976 -5857851 + (CTG)n Simple_repeat Simple_repeat 1 118 0 1 711 201 133 0 0 chrX 16565847 16565877 -5856950 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 1 711 23 0 0 0 chrX 16566667 16566690 -5856137 + AT_rich Low_complexity Low_complexity 1 23 0 1 711 225 0 0 0 chrX 16567379 16567404 -5855423 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 711 183 42 0 0 chrX 16567543 16567567 -5855260 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 1 711 192 24 91 45 chrX 16568214 16568258 -5854569 + (CATAT)n Simple_repeat Simple_repeat 4 49 0 1 711 330 26 0 0 chrX 16569225 16569264 -5853563 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 711 210 128 0 0 chrX 16569707 16569746 -5853081 + (A)n Simple_repeat Simple_repeat 1 39 0 1 711 22 35 0 0 chrX 16570070 16570099 -5852728 + AT_rich Low_complexity Low_complexity 1 29 0 1 711 21 36 0 0 chrX 16570389 16570417 -5852410 + AT_rich Low_complexity Low_complexity 1 28 0 1 711 25 31 0 0 chrX 16571226 16571258 -5851569 + AT_rich Low_complexity Low_complexity 1 32 0 1 711 26 0 0 0 chrX 16571368 16571394 -5851433 + AT_rich Low_complexity Low_complexity 1 26 0 1 711 24 0 0 0 chrX 16580174 16580198 -5842629 + AT_rich Low_complexity Low_complexity 1 24 0 1 711 252 0 0 0 chrX 16581602 16581630 -5841197 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 711 33 0 0 0 chrX 16582610 16582643 -5840184 + AT_rich Low_complexity Low_complexity 1 33 0 1 711 21 0 0 0 chrX 16583162 16583183 -5839644 + AT_rich Low_complexity Low_complexity 1 21 0 1 711 22 0 0 0 chrX 16583703 16583725 -5839102 + AT_rich Low_complexity Low_complexity 1 22 0 1 711 308 133 17 0 chrX 16584190 16584250 -5838577 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 711 206 118 0 0 chrX 16587018 16587052 -5835775 + (A)n Simple_repeat Simple_repeat 1 34 0 1 711 212 200 0 18 chrX 16587250 16587306 -5835521 + (CATA)n Simple_repeat Simple_repeat 2 56 0 1 711 207 0 0 0 chrX 16588013 16588036 -5834791 + (T)n Simple_repeat Simple_repeat 1 23 0 1 711 21 36 0 0 chrX 16589997 16590025 -5832802 + AT_rich Low_complexity Low_complexity 1 28 0 1 711 237 83 0 0 chrX 16590545 16590581 -5832246 + (CAA)n Simple_repeat Simple_repeat 2 37 0 1 711 22 0 0 0 chrX 16593193 16593215 -5829612 + AT_rich Low_complexity Low_complexity 1 22 0 1 711 228 135 0 0 chrX 16594224 16594261 -5828566 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 711 23 78 0 0 chrX 16595636 16595687 -5827140 + AT_rich Low_complexity Low_complexity 1 51 0 1 711 26 0 0 0 chrX 16598433 16598459 -5824368 + AT_rich Low_complexity Low_complexity 1 26 0 1 711 33 73 0 0 chrX 16601171 16601239 -5821588 + AT_rich Low_complexity Low_complexity 1 68 0 1 711 249 146 0 0 chrX 16601528 16601576 -5821251 + (CATCC)n Simple_repeat Simple_repeat 1 48 0 1 711 24 53 0 0 chrX 16604529 16604567 -5818260 + AT_rich Low_complexity Low_complexity 1 38 0 1 711 228 135 0 0 chrX 16605913 16605950 -5816877 + (ATG)n Simple_repeat Simple_repeat 3 39 0 1 711 32 0 0 0 chrX 16608405 16608437 -5814390 + AT_rich Low_complexity Low_complexity 1 32 0 1 711 291 56 56 0 chrX 16609339 16609393 -5813434 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 711 22 0 0 0 chrX 16610341 16610363 -5812464 + AT_rich Low_complexity Low_complexity 1 22 0 1 711 264 77 0 0 chrX 16610976 16611015 -5811812 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 711 46 19 0 0 chrX 16611174 16611227 -5811600 + AT_rich Low_complexity Low_complexity 1 53 0 1 711 21 0 0 0 chrX 16612027 16612048 -5810779 + AT_rich Low_complexity Low_complexity 1 21 0 1 711 242 182 15 15 chrX 16612532 16612599 -5810228 + A-rich Low_complexity Low_complexity 2 68 0 1 711 249 214 0 0 chrX 16614275 16614331 -5808496 + T-rich Low_complexity Low_complexity 1 56 0 1 711 285 37 36 36 chrX 16614972 16615028 -5807799 + (TTTTA)n Simple_repeat Simple_repeat 4 59 0 1 711 22 80 0 0 chrX 16616087 16616137 -5806690 + AT_rich Low_complexity Low_complexity 1 50 0 1 711 21 0 0 0 chrX 16617420 16617441 -5805386 + AT_rich Low_complexity Low_complexity 1 21 0 1 711 206 262 12 24 chrX 16617573 16617655 -5805172 + GA-rich Low_complexity Low_complexity 5 85 0 1 711 191 182 0 29 chrX 16617776 16617844 -5804983 + (CAA)n Simple_repeat Simple_repeat 1 66 0 1 711 202 250 0 0 chrX 16618870 16618914 -5803913 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 711 24 0 0 0 chrX 16620989 16621013 -5801814 + AT_rich Low_complexity Low_complexity 1 24 0 1 711 543 31 0 0 chrX 16621081 16621145 -5801682 + Jockey2 LINE Jockey 3338 3401 -27 1 711 33 0 0 0 chrX 16626612 16626645 -5796182 + AT_rich Low_complexity Low_complexity 1 33 0 1 711 180 0 0 0 chrX 16628055 16628075 -5794752 + (TATAA)n Simple_repeat Simple_repeat 5 24 0 1 711 21 71 0 0 chrX 16628280 16628322 -5794505 + AT_rich Low_complexity Low_complexity 1 42 0 1 711 207 0 0 0 chrX 16629078 16629101 -5793726 + (A)n Simple_repeat Simple_repeat 1 23 0 1 711 22 56 0 0 chrX 16630228 16630264 -5792563 + AT_rich Low_complexity Low_complexity 1 36 0 1 711 213 265 29 0 chrX 16630286 16630354 -5792473 + A-rich Low_complexity Low_complexity 3 72 0 1 711 21 36 0 0 chrX 16631620 16631648 -5791179 + AT_rich Low_complexity Low_complexity 1 28 0 1 711 25 0 0 0 chrX 16631818 16631843 -5790984 + AT_rich Low_complexity Low_complexity 1 25 0 1 711 22 56 0 0 chrX 16633111 16633147 -5789680 + AT_rich Low_complexity Low_complexity 1 36 0 1 711 23 0 0 0 chrX 16635003 16635026 -5787801 + AT_rich Low_complexity Low_complexity 1 23 0 1 711 195 139 0 0 chrX 16635514 16635550 -5787277 + (T)n Simple_repeat Simple_repeat 1 36 0 1 711 24 32 0 0 chrX 16640420 16640451 -5782376 + AT_rich Low_complexity Low_complexity 1 31 0 1 711 28 29 0 0 chrX 16640838 16640873 -5781954 + AT_rich Low_complexity Low_complexity 1 35 0 1 711 222 171 67 22 chrX 16642142 16642232 -5780595 + (CTATA)n Simple_repeat Simple_repeat 4 97 0 1 711 189 0 0 0 chrX 16644785 16644806 -5778021 + (T)n Simple_repeat Simple_repeat 1 21 0 1 711 25 0 0 0 chrX 16645119 16645144 -5777683 + AT_rich Low_complexity Low_complexity 1 25 0 1 711 206 154 26 0 chrX 16645291 16645330 -5777497 + T-rich Low_complexity Low_complexity 3 42 0 1 711 25 0 0 0 chrX 16645845 16645870 -5776957 + AT_rich Low_complexity Low_complexity 1 25 0 1 712 21 0 0 0 chrX 16646508 16646529 -5776298 + AT_rich Low_complexity Low_complexity 1 21 0 1 712 29 28 0 0 chrX 16646614 16646650 -5776177 + AT_rich Low_complexity Low_complexity 1 36 0 1 712 215 183 49 16 chrX 16646937 16646998 -5775829 + (TTCA)n Simple_repeat Simple_repeat 1 63 0 1 712 24 0 0 0 chrX 16647104 16647128 -5775699 + AT_rich Low_complexity Low_complexity 1 24 0 1 712 183 42 0 0 chrX 16648568 16648592 -5774235 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 712 24 0 0 0 chrX 16651749 16651773 -5771054 + AT_rich Low_complexity Low_complexity 1 24 0 1 712 26 0 0 0 chrX 16652656 16652682 -5770145 + AT_rich Low_complexity Low_complexity 1 26 0 1 712 231 36 0 0 chrX 16654287 16654315 -5768512 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 1 712 186 43 0 0 chrX 16654463 16654486 -5768341 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 712 24 32 0 0 chrX 16654841 16654872 -5767955 + AT_rich Low_complexity Low_complexity 1 31 0 1 712 189 0 0 0 chrX 16655087 16655108 -5767719 + (A)n Simple_repeat Simple_repeat 1 21 0 1 712 189 0 0 0 chrX 16655537 16655558 -5767269 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1 712 225 83 0 0 chrX 16656100 16656136 -5766691 + (T)n Simple_repeat Simple_repeat 1 36 0 1 712 198 71 0 0 chrX 16656477 16656505 -5766322 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 712 26 0 0 0 chrX 16656686 16656712 -5766115 + AT_rich Low_complexity Low_complexity 1 26 0 1 712 198 103 0 0 chrX 16657273 16657302 -5765525 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 712 24 32 0 0 chrX 16658071 16658102 -5764725 + AT_rich Low_complexity Low_complexity 1 31 0 1 712 38 39 0 0 chrX 16658886 16658938 -5763889 + AT_rich Low_complexity Low_complexity 1 52 0 1 712 28 0 0 0 chrX 16661416 16661444 -5761383 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 65 56 0 0 chrX 16662875 16662982 -5759845 + AT_rich Low_complexity Low_complexity 1 107 0 1 712 33 0 0 0 chrX 16663843 16663876 -5758951 + AT_rich Low_complexity Low_complexity 1 33 0 1 712 22 35 0 0 chrX 16667303 16667332 -5755495 + AT_rich Low_complexity Low_complexity 1 29 0 1 712 22 0 0 0 chrX 16667564 16667586 -5755241 + AT_rich Low_complexity Low_complexity 1 22 0 1 712 21 36 0 0 chrX 16667860 16667888 -5754939 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 263 87 0 42 chrX 16668485 16668533 -5754294 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1 712 183 42 0 0 chrX 16669180 16669204 -5753623 + (TATCG)n Simple_repeat Simple_repeat 1 24 0 1 712 43 0 0 0 chrX 16669717 16669760 -5753067 + AT_rich Low_complexity Low_complexity 1 43 0 1 712 249 180 0 0 chrX 16670885 16670935 -5751892 + (CAGC)n Simple_repeat Simple_repeat 4 53 0 1 712 31 58 0 0 chrX 16671458 16671510 -5751317 + AT_rich Low_complexity Low_complexity 1 52 0 1 712 180 0 0 0 chrX 16672705 16672725 -5750102 + (ACCG)n Simple_repeat Simple_repeat 2 21 0 1 712 234 182 15 29 chrX 16674340 16674408 -5748419 + A-rich Low_complexity Low_complexity 1 67 0 1 712 208 235 0 0 chrX 16674485 16674536 -5748291 + CT-rich Low_complexity Low_complexity 2 52 0 1 712 23 0 0 0 chrX 16674808 16674831 -5747996 + AT_rich Low_complexity Low_complexity 1 23 0 1 712 34 24 0 0 chrX 16674899 16674940 -5747887 + AT_rich Low_complexity Low_complexity 1 41 0 1 712 25 31 0 0 chrX 16676945 16676977 -5745850 + AT_rich Low_complexity Low_complexity 1 32 0 1 712 26 30 0 0 chrX 16677852 16677885 -5744942 + AT_rich Low_complexity Low_complexity 1 33 0 1 712 25 31 0 0 chrX 16681616 16681648 -5741179 + AT_rich Low_complexity Low_complexity 1 32 0 1 712 267 31 0 0 chrX 16685667 16685699 -5737128 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 712 23 68 0 0 chrX 16686034 16686078 -5736749 + AT_rich Low_complexity Low_complexity 1 44 0 1 712 23 0 0 0 chrX 16689936 16689959 -5732868 + AT_rich Low_complexity Low_complexity 1 23 0 1 712 25 0 0 0 chrX 16690661 16690686 -5732141 + AT_rich Low_complexity Low_complexity 1 25 0 1 712 267 31 0 0 chrX 16691809 16691841 -5730986 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 712 213 132 0 0 chrX 16692397 16692435 -5730392 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 712 213 224 0 0 chrX 16694205 16694254 -5728573 + T-rich Low_complexity Low_complexity 1 49 0 1 712 28 0 0 0 chrX 16703075 16703103 -5719724 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 28 0 0 0 chrX 16703190 16703218 -5719609 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 24 0 0 0 chrX 16703845 16703869 -5718958 + AT_rich Low_complexity Low_complexity 1 24 0 1 712 252 130 0 0 chrX 16705605 16705651 -5717176 + (ATGGTG)n Simple_repeat Simple_repeat 3 48 0 1 712 36 23 0 0 chrX 16707408 16707451 -5715376 + AT_rich Low_complexity Low_complexity 1 43 0 1 712 23 0 0 0 chrX 16707722 16707745 -5715082 + AT_rich Low_complexity Low_complexity 1 23 0 1 712 201 225 14 27 chrX 16709863 16709936 -5712891 + (TTTG)n Simple_repeat Simple_repeat 1 72 0 1 712 233 29 29 0 chrX 16710223 16710257 -5712570 + (TAAAA)n Simple_repeat Simple_repeat 3 37 0 1 712 27 103 0 0 chrX 16710380 16710477 -5712350 + AT_rich Low_complexity Low_complexity 1 97 0 1 712 21 0 0 0 chrX 16711491 16711512 -5711315 + AT_rich Low_complexity Low_complexity 1 21 0 1 712 28 0 0 0 chrX 16713276 16713304 -5709523 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 23 33 0 0 chrX 16715403 16715433 -5707394 + AT_rich Low_complexity Low_complexity 1 30 0 1 712 22 0 0 0 chrX 16717034 16717056 -5705771 + AT_rich Low_complexity Low_complexity 1 22 0 1 712 461 208 11 11 chrX 16717652 16717832 -5704995 + (CAA)n Simple_repeat Simple_repeat 1 180 0 1 712 31 26 0 0 chrX 16718352 16718390 -5704437 + AT_rich Low_complexity Low_complexity 1 38 0 1 712 234 116 0 0 chrX 16720193 16720236 -5702591 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 1 712 252 130 0 0 chrX 16723008 16723054 -5699773 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 712 21 0 0 0 chrX 16723374 16723395 -5699432 + AT_rich Low_complexity Low_complexity 1 21 0 1 712 202 128 26 0 chrX 16724038 16724077 -5698750 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 712 23 0 0 0 chrX 16729865 16729888 -5692939 + AT_rich Low_complexity Low_complexity 1 23 0 1 712 23 0 0 0 chrX 16730080 16730103 -5692724 + AT_rich Low_complexity Low_complexity 1 23 0 1 712 24 32 0 0 chrX 16731824 16731855 -5690972 + AT_rich Low_complexity Low_complexity 1 31 0 1 712 592 73 24 0 chrX 16732049 16732131 -5690696 + DNAREP1_DM LINE Penelope 11 94 -500 1 712 308 94 19 0 chrX 16732632 16732685 -5690142 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 712 183 42 0 0 chrX 16733614 16733638 -5689189 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 1 712 206 281 0 0 chrX 16733935 16733992 -5688835 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 712 24 53 0 0 chrX 16735908 16735946 -5686881 + AT_rich Low_complexity Low_complexity 1 38 0 1 712 261 270 0 0 chrX 16737522 16737596 -5685231 + (CTG)n Simple_repeat Simple_repeat 1 74 0 1 712 233 98 24 0 chrX 16738008 16738049 -5684778 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 712 195 42 0 0 chrX 16738233 16738257 -5684570 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 712 195 170 0 0 chrX 16738410 16738457 -5684370 + CT-rich Low_complexity Low_complexity 1 47 0 1 712 228 86 0 0 chrX 16741542 16741577 -5681250 + (TGG)n Simple_repeat Simple_repeat 3 37 0 1 712 22 88 0 0 chrX 16743207 16743264 -5679563 + AT_rich Low_complexity Low_complexity 1 57 0 1 712 268 222 36 36 chrX 16743555 16743667 -5679160 - ROO_I LTR Pao -7512 744 633 1 712 210 333 13 0 chrX 16743853 16743931 -5678896 + (TCG)n Simple_repeat Simple_repeat 2 80 0 1 712 258 143 0 0 chrX 16745192 16745241 -5677586 + (CAATC)n Simple_repeat Simple_repeat 1 49 0 1 712 231 36 0 0 chrX 16745628 16745656 -5677171 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 712 186 43 0 0 chrX 16745948 16745971 -5676856 + (A)n Simple_repeat Simple_repeat 1 23 0 1 712 35 95 0 0 chrX 16746064 16746169 -5676658 + AT_rich Low_complexity Low_complexity 1 105 0 1 712 25 31 0 0 chrX 16748607 16748639 -5674188 + AT_rich Low_complexity Low_complexity 1 32 0 1 712 225 0 0 0 chrX 16749875 16749900 -5672927 + (ATTCG)n Simple_repeat Simple_repeat 1 25 0 1 712 180 0 0 0 chrX 16750783 16750803 -5672024 + (CTTTA)n Simple_repeat Simple_repeat 1 20 0 1 712 218 198 21 85 chrX 16751534 16751628 -5671199 + T-rich Low_complexity Low_complexity 1 88 0 1 712 221 119 0 23 chrX 16751791 16751834 -5670993 + (TTG)n Simple_repeat Simple_repeat 1 42 0 1 712 21 36 0 0 chrX 16752050 16752078 -5670749 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 21 82 0 0 chrX 16756546 16756595 -5666232 + AT_rich Low_complexity Low_complexity 1 49 0 1 712 21 36 0 0 chrX 16758071 16758099 -5664728 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 258 116 0 0 chrX 16759954 16759997 -5662830 + (CGAAT)n Simple_repeat Simple_repeat 3 45 0 1 712 207 0 0 0 chrX 16762514 16762537 -5660290 + (CAAAT)n Simple_repeat Simple_repeat 2 24 0 1 712 213 156 0 22 chrX 16767289 16767335 -5655492 + (TTA)n Simple_repeat Simple_repeat 3 47 0 1 712 213 39 0 0 chrX 16767730 16767756 -5655071 + (CATATA)n Simple_repeat Simple_repeat 5 30 0 1 712 293 82 20 0 chrX 16769467 16769516 -5653311 + (TATAA)n Simple_repeat Simple_repeat 1 50 0 1 712 198 118 0 0 chrX 16769922 16769956 -5652871 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 712 21 36 0 0 chrX 16770086 16770114 -5652713 + AT_rich Low_complexity Low_complexity 1 28 0 1 712 48 53 0 0 chrX 16771125 16771201 -5651626 + AT_rich Low_complexity Low_complexity 1 76 0 1 712 22 35 0 0 chrX 16771397 16771426 -5651401 + AT_rich Low_complexity Low_complexity 1 29 0 1 712 21 71 0 0 chrX 16772391 16772433 -5650394 + AT_rich Low_complexity Low_complexity 1 42 0 1 712 26 0 0 0 chrX 16772726 16772752 -5650075 + AT_rich Low_complexity Low_complexity 1 26 0 1 712 22 70 0 0 chrX 16773413 16773456 -5649371 + AT_rich Low_complexity Low_complexity 1 43 0 1 712 207 152 0 0 chrX 16774711 16774757 -5648070 + (GATTG)n Simple_repeat Simple_repeat 4 49 0 1 713 23 54 0 0 chrX 16778839 16778876 -5643951 + AT_rich Low_complexity Low_complexity 1 37 0 1 713 33 43 0 0 chrX 16782658 16782705 -5640122 + AT_rich Low_complexity Low_complexity 1 47 0 1 713 245 191 0 0 chrX 16782926 16782973 -5639854 - Jockey2 LINE Jockey -466 2962 2916 1 713 180 0 0 0 chrX 16784966 16784986 -5637841 + (T)n Simple_repeat Simple_repeat 1 20 0 1 713 191 89 35 35 chrX 16785424 16785482 -5637345 + (TAA)n Simple_repeat Simple_repeat 2 59 0 1 713 202 257 13 13 chrX 16788021 16788096 -5634731 + (TAAA)n Simple_repeat Simple_repeat 1 75 0 1 713 29 28 0 0 chrX 16791292 16791328 -5631499 + AT_rich Low_complexity Low_complexity 1 36 0 1 713 198 0 0 0 chrX 16792174 16792196 -5630631 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 713 21 57 0 0 chrX 16793062 16793097 -5629730 + AT_rich Low_complexity Low_complexity 1 35 0 1 713 183 80 0 0 chrX 16793617 16793642 -5629185 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1 713 198 150 0 0 chrX 16794145 16794185 -5628642 + (T)n Simple_repeat Simple_repeat 1 40 0 1 713 258 105 0 0 chrX 16794473 16794511 -5628316 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 713 27 92 0 0 chrX 16794824 16794900 -5627927 + AT_rich Low_complexity Low_complexity 1 76 0 1 713 348 24 0 0 chrX 16795577 16795618 -5627209 + (CAT)n Simple_repeat Simple_repeat 2 42 0 1 713 22 0 0 0 chrX 16796015 16796037 -5626790 + AT_rich Low_complexity Low_complexity 1 22 0 1 713 25 0 0 0 chrX 16796281 16796306 -5626521 + AT_rich Low_complexity Low_complexity 1 25 0 1 713 21 36 0 0 chrX 16798544 16798572 -5624255 + AT_rich Low_complexity Low_complexity 1 28 0 1 713 192 40 0 0 chrX 16800251 16800276 -5622551 + (T)n Simple_repeat Simple_repeat 1 25 0 1 713 298 143 13 13 chrX 16801092 16801170 -5621657 + (CAAGC)n Simple_repeat Simple_repeat 1 78 0 1 713 201 136 0 43 chrX 16801176 16801222 -5621605 + (CCGAA)n Simple_repeat Simple_repeat 4 47 0 1 713 30 59 0 0 chrX 16802731 16802782 -5620045 + AT_rich Low_complexity Low_complexity 1 51 0 1 713 23 0 0 0 chrX 16803691 16803714 -5619113 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 231 36 0 0 chrX 16805001 16805029 -5617798 + (TAA)n Simple_repeat Simple_repeat 1 28 0 1 713 26 0 0 0 chrX 16805685 16805711 -5617116 + AT_rich Low_complexity Low_complexity 1 26 0 1 713 21 36 0 0 chrX 16806624 16806652 -5616175 + AT_rich Low_complexity Low_complexity 1 28 0 1 713 240 167 0 0 chrX 16807351 16807399 -5615428 + (CAA)n Simple_repeat Simple_repeat 1 48 0 1 713 243 0 0 0 chrX 16807467 16807494 -5615333 + (CAA)n Simple_repeat Simple_repeat 3 29 0 1 713 25 31 0 0 chrX 16807971 16808003 -5614824 + AT_rich Low_complexity Low_complexity 1 32 0 1 713 233 172 16 0 chrX 16808132 16808196 -5614631 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 713 21 0 0 0 chrX 16808357 16808378 -5614449 + AT_rich Low_complexity Low_complexity 1 21 0 1 713 201 94 0 0 chrX 16808876 16808908 -5613919 + (TAAAAA)n Simple_repeat Simple_repeat 3 34 0 1 713 354 45 0 0 chrX 16809836 16809880 -5612947 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 713 21 0 0 0 chrX 16810041 16810062 -5612765 + AT_rich Low_complexity Low_complexity 1 21 0 1 713 201 180 0 0 chrX 16810385 16810435 -5612392 + A-rich Low_complexity Low_complexity 1 50 0 1 713 34 42 0 0 chrX 16810752 16810800 -5612027 + AT_rich Low_complexity Low_complexity 1 48 0 1 713 23 0 0 0 chrX 16813450 16813473 -5609354 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 24 0 0 0 chrX 16813543 16813567 -5609260 + AT_rich Low_complexity Low_complexity 1 24 0 1 713 208 137 39 0 chrX 16815214 16815265 -5607562 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 713 21 0 0 0 chrX 16815447 16815468 -5607359 + AT_rich Low_complexity Low_complexity 1 21 0 1 713 23 0 0 0 chrX 16817761 16817784 -5605043 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 186 43 0 0 chrX 16818902 16818925 -5603902 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 713 223 225 0 0 chrX 16819059 16819099 -5603728 + (CGG)n Simple_repeat Simple_repeat 2 41 0 1 713 426 94 0 0 chrX 16822355 16822419 -5600408 + (CAGT)n Simple_repeat Simple_repeat 1 64 0 1 713 180 0 0 0 chrX 16824048 16824068 -5598759 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 713 210 71 0 0 chrX 16824176 16824204 -5598623 + (TAA)n Simple_repeat Simple_repeat 3 30 0 1 713 201 250 0 0 chrX 16824920 16824976 -5597851 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 713 36 0 0 0 chrX 16825084 16825120 -5597707 + AT_rich Low_complexity Low_complexity 1 36 0 1 713 216 86 0 0 chrX 16826354 16826389 -5596438 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 713 213 94 0 0 chrX 16826502 16826534 -5596293 + (CATA)n Simple_repeat Simple_repeat 3 34 0 1 713 204 179 0 0 chrX 16827246 16827285 -5595542 + (CATATA)n Simple_repeat Simple_repeat 3 41 0 1 713 225 72 0 92 chrX 16827818 16827894 -5594933 + A-rich Low_complexity Low_complexity 5 73 0 1 713 2879 0 0 3 chrX 16830096 16830436 -5592391 + LINEJ1_DM LINE Jockey 4669 5007 -13 1 713 219 125 0 0 chrX 16830590 16830630 -5592197 + (CCG)n Simple_repeat Simple_repeat 1 40 0 1 713 30 0 0 0 chrX 16831760 16831790 -5591037 + AT_rich Low_complexity Low_complexity 1 30 0 1 713 23 0 0 0 chrX 16831834 16831857 -5590970 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 25 51 0 0 chrX 16832206 16832245 -5590582 + AT_rich Low_complexity Low_complexity 1 39 0 1 713 34 55 0 0 chrX 16832266 16832321 -5590506 + AT_rich Low_complexity Low_complexity 1 55 0 1 713 23 33 0 0 chrX 16834288 16834318 -5588509 + AT_rich Low_complexity Low_complexity 1 30 0 1 713 23 33 0 0 chrX 16834453 16834483 -5588344 + AT_rich Low_complexity Low_complexity 1 30 0 1 713 217 167 0 53 chrX 16834686 16834743 -5588084 + A-rich Low_complexity Low_complexity 5 58 0 1 713 180 111 0 0 chrX 16835872 16835899 -5586928 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 713 280 274 0 0 chrX 16835946 16836030 -5586797 + (CCG)n Simple_repeat Simple_repeat 2 85 0 1 713 202 189 0 0 chrX 16836115 16836152 -5586675 + (CCG)n Simple_repeat Simple_repeat 1 37 0 1 713 22 35 0 0 chrX 16838232 16838261 -5584566 + AT_rich Low_complexity Low_complexity 1 29 0 1 713 210 179 0 25 chrX 16840097 16840137 -5582690 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 1 713 23 68 0 0 chrX 16844716 16844760 -5578067 + AT_rich Low_complexity Low_complexity 1 44 0 1 713 22 56 0 0 chrX 16848714 16848750 -5574077 + AT_rich Low_complexity Low_complexity 1 36 0 1 713 576 64 21 11 chrX 16850451 16850546 -5572281 + (TA)n Simple_repeat Simple_repeat 1 96 0 1 713 321 135 0 0 chrX 16851089 16851141 -5571686 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 713 183 42 0 0 chrX 16857539 16857563 -5565264 + (GATTG)n Simple_repeat Simple_repeat 1 24 0 1 713 23 0 0 0 chrX 16857905 16857928 -5564899 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 206 222 0 0 chrX 16858785 16858830 -5563997 + (AACTG)n Simple_repeat Simple_repeat 1 45 0 1 713 21 0 0 0 chrX 16859399 16859420 -5563407 + AT_rich Low_complexity Low_complexity 1 21 0 1 713 180 0 0 0 chrX 16860038 16860058 -5562769 + (GTATG)n Simple_repeat Simple_repeat 2 21 0 1 713 23 0 0 0 chrX 16862334 16862357 -5560470 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 22 0 0 0 chrX 16863665 16863687 -5559140 + AT_rich Low_complexity Low_complexity 1 22 0 1 713 24 85 0 0 chrX 16865674 16865733 -5557094 + AT_rich Low_complexity Low_complexity 1 59 0 1 713 33 43 0 0 chrX 16866116 16866163 -5556664 + AT_rich Low_complexity Low_complexity 1 47 0 1 713 25 0 0 0 chrX 16866212 16866237 -5556590 + AT_rich Low_complexity Low_complexity 1 25 0 1 713 22 35 0 0 chrX 16866552 16866581 -5556246 + AT_rich Low_complexity Low_complexity 1 29 0 1 713 25 31 0 0 chrX 16870003 16870035 -5552792 + AT_rich Low_complexity Low_complexity 1 32 0 1 713 180 182 0 0 chrX 16871142 16871186 -5551641 + T-rich Low_complexity Low_complexity 3 46 0 1 713 27 0 0 0 chrX 16871782 16871809 -5551018 + AT_rich Low_complexity Low_complexity 1 27 0 1 713 21 0 0 0 chrX 16871850 16871871 -5550956 + AT_rich Low_complexity Low_complexity 1 21 0 1 713 265 238 0 0 chrX 16873555 16873618 -5549209 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 713 31 0 0 0 chrX 16875527 16875558 -5547269 + AT_rich Low_complexity Low_complexity 1 31 0 1 713 22 70 0 0 chrX 16876574 16876617 -5546210 + AT_rich Low_complexity Low_complexity 1 43 0 1 713 40 67 0 0 chrX 16878056 16878131 -5544696 + AT_rich Low_complexity Low_complexity 1 75 0 1 713 255 61 0 0 chrX 16878426 16878459 -5544368 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 713 234 0 0 0 chrX 16879177 16879203 -5543624 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 713 246 81 0 0 chrX 16879717 16879754 -5543073 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 713 225 0 0 0 chrX 16880770 16880795 -5542032 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 713 243 125 0 24 chrX 16880797 16880838 -5541989 + DOC5_DM LINE Jockey 565 604 -4078 1 713 23 0 0 0 chrX 16881526 16881549 -5541278 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 23 33 0 0 chrX 16881686 16881716 -5541111 + AT_rich Low_complexity Low_complexity 1 30 0 1 713 255 61 0 0 chrX 16884971 16885004 -5537823 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 713 25 0 0 0 chrX 16885566 16885591 -5537236 + AT_rich Low_complexity Low_complexity 1 25 0 1 713 24 77 0 0 chrX 16886664 16886716 -5536111 + AT_rich Low_complexity Low_complexity 1 52 0 1 713 229 250 0 0 chrX 16886816 16886868 -5535959 + (TTG)n Simple_repeat Simple_repeat 3 54 0 1 713 208 269 0 0 chrX 16887074 16887126 -5535701 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 713 22 56 0 0 chrX 16888490 16888526 -5534301 + AT_rich Low_complexity Low_complexity 1 36 0 1 713 305 47 0 23 chrX 16889817 16889861 -5532966 + (TC)n Simple_repeat Simple_repeat 1 43 0 1 713 30 0 0 0 chrX 16889970 16890000 -5532827 + AT_rich Low_complexity Low_complexity 1 30 0 1 713 186 103 0 0 chrX 16890465 16890494 -5532333 + (CACTT)n Simple_repeat Simple_repeat 1 29 0 1 713 332 103 17 0 chrX 16890780 16890838 -5531989 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 713 213 39 0 0 chrX 16891383 16891409 -5531418 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 713 31 26 0 0 chrX 16893894 16893932 -5528895 + AT_rich Low_complexity Low_complexity 1 38 0 1 713 21 57 0 0 chrX 16894024 16894059 -5528768 + AT_rich Low_complexity Low_complexity 1 35 0 1 713 180 0 0 0 chrX 16894304 16894324 -5528503 + (T)n Simple_repeat Simple_repeat 1 20 0 1 713 180 0 0 0 chrX 16898308 16898328 -5524499 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 713 206 156 22 0 chrX 16898937 16898982 -5523845 + (CAT)n Simple_repeat Simple_repeat 1 46 0 1 713 21 0 0 0 chrX 16899010 16899031 -5523796 + AT_rich Low_complexity Low_complexity 1 21 0 1 713 206 275 22 11 chrX 16900208 16900300 -5522527 + (TTTA)n Simple_repeat Simple_repeat 1 93 0 1 713 489 76 0 0 chrX 16901087 16901153 -5521674 + (TCTCCC)n Simple_repeat Simple_repeat 6 71 0 1 713 24 0 0 0 chrX 16901215 16901239 -5521588 + AT_rich Low_complexity Low_complexity 1 24 0 1 713 21 0 0 0 chrX 16901422 16901443 -5521384 + AT_rich Low_complexity Low_complexity 1 21 0 1 713 23 0 0 0 chrX 16901944 16901967 -5520860 + AT_rich Low_complexity Low_complexity 1 23 0 1 713 22 70 0 0 chrX 16902906 16902949 -5519878 + AT_rich Low_complexity Low_complexity 1 43 0 1 713 39 0 0 0 chrX 16907332 16907371 -5515456 + AT_rich Low_complexity Low_complexity 1 39 0 1 713 210 231 62 0 chrX 16908220 16908285 -5514542 + T-rich Low_complexity Low_complexity 2 70 0 1 714 29 28 0 0 chrX 16908551 16908587 -5514240 + AT_rich Low_complexity Low_complexity 1 36 0 1 714 22 0 0 0 chrX 16908937 16908959 -5513868 + AT_rich Low_complexity Low_complexity 1 22 0 1 714 43 20 0 0 chrX 16909488 16909538 -5513289 + AT_rich Low_complexity Low_complexity 1 50 0 1 714 195 186 0 0 chrX 16909925 16909968 -5512859 + (GAATG)n Simple_repeat Simple_repeat 1 43 0 1 714 222 105 0 0 chrX 16911805 16911843 -5510984 + (TTTTTA)n Simple_repeat Simple_repeat 2 39 0 1 714 22 56 0 0 chrX 16911991 16912027 -5510800 + AT_rich Low_complexity Low_complexity 1 36 0 1 714 30 0 0 0 chrX 16913211 16913241 -5509586 + AT_rich Low_complexity Low_complexity 1 30 0 1 714 198 0 0 0 chrX 16913437 16913459 -5509368 + (T)n Simple_repeat Simple_repeat 1 22 0 1 714 21 36 0 0 chrX 16914631 16914659 -5508168 + AT_rich Low_complexity Low_complexity 1 28 0 1 714 309 336 0 0 chrX 16916650 16916781 -5506046 + (ATG)n Simple_repeat Simple_repeat 3 133 0 1 714 22 56 0 0 chrX 16918155 16918191 -5504636 + AT_rich Low_complexity Low_complexity 1 36 0 1 714 226 289 13 0 chrX 16919004 16919080 -5503747 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 714 26 0 0 0 chrX 16921358 16921384 -5501443 + AT_rich Low_complexity Low_complexity 1 26 0 1 714 309 135 0 0 chrX 16921512 16921564 -5501263 + (CATA)n Simple_repeat Simple_repeat 4 55 0 1 714 220 211 0 0 chrX 16921646 16921698 -5501129 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 714 32 0 0 0 chrX 16922652 16922684 -5500143 + AT_rich Low_complexity Low_complexity 1 32 0 1 714 208 170 43 0 chrX 16922921 16922968 -5499859 + (CATG)n Simple_repeat Simple_repeat 3 51 0 1 714 276 100 0 0 chrX 16924072 16924112 -5498715 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 714 21 0 0 0 chrX 16925220 16925241 -5497586 + AT_rich Low_complexity Low_complexity 1 21 0 1 714 185 0 40 0 chrX 16925382 16925407 -5497420 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 1 714 27 29 0 0 chrX 16925919 16925953 -5496874 + AT_rich Low_complexity Low_complexity 1 34 0 1 714 21 0 0 0 chrX 16926145 16926166 -5496661 + AT_rich Low_complexity Low_complexity 1 21 0 1 714 215 103 26 0 chrX 16926642 16926681 -5496146 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1 714 203 179 0 0 chrX 16930304 16930343 -5492484 + A-rich Low_complexity Low_complexity 1 39 0 1 714 21 57 0 0 chrX 16933468 16933503 -5489324 + AT_rich Low_complexity Low_complexity 1 35 0 1 714 195 162 0 0 chrX 16934387 16934424 -5488403 + (CATA)n Simple_repeat Simple_repeat 1 37 0 1 714 21 57 0 0 chrX 16935111 16935146 -5487681 + AT_rich Low_complexity Low_complexity 1 35 0 1 714 238 299 9 0 chrX 16935525 16935632 -5487195 + (TTCGGG)n Simple_repeat Simple_repeat 4 111 0 1 714 37 0 0 0 chrX 16935930 16935967 -5486860 + AT_rich Low_complexity Low_complexity 1 37 0 1 714 231 161 0 0 chrX 16937725 16937781 -5485046 + (ACTG)n Simple_repeat Simple_repeat 2 57 0 1 714 36 53 0 0 chrX 16940840 16940897 -5481930 + AT_rich Low_complexity Low_complexity 1 57 0 1 714 186 118 0 0 chrX 16942624 16942658 -5480169 + (TATAA)n Simple_repeat Simple_repeat 2 35 0 1 714 24 53 0 0 chrX 16942685 16942723 -5480104 + AT_rich Low_complexity Low_complexity 1 38 0 1 714 31 26 0 0 chrX 16947007 16947045 -5475782 + AT_rich Low_complexity Low_complexity 1 38 0 1 714 24 67 0 0 chrX 16947084 16947129 -5475698 + AT_rich Low_complexity Low_complexity 1 45 0 1 714 21 0 0 0 chrX 16947662 16947683 -5475144 + AT_rich Low_complexity Low_complexity 1 21 0 1 714 234 0 0 0 chrX 16948665 16948691 -5474136 + (T)n Simple_repeat Simple_repeat 1 26 0 1 714 24 0 0 0 chrX 16949331 16949355 -5473472 + AT_rich Low_complexity Low_complexity 1 24 0 1 714 21 57 0 0 chrX 16950097 16950132 -5472695 + AT_rich Low_complexity Low_complexity 1 35 0 1 714 32 26 0 0 chrX 16951967 16952006 -5470821 + AT_rich Low_complexity Low_complexity 1 39 0 1 714 1720 0 0 0 chrX 16952021 16952207 -5470620 - POGON1 DNA Pogo 0 186 1 1 714 21 36 0 0 chrX 16954505 16954533 -5468294 + AT_rich Low_complexity Low_complexity 1 28 0 1 714 23 0 0 0 chrX 16956210 16956233 -5466594 + AT_rich Low_complexity Low_complexity 1 23 0 1 714 27 103 0 0 chrX 16956484 16956581 -5466246 + AT_rich Low_complexity Low_complexity 1 97 0 1 714 209 83 0 27 chrX 16956879 16956916 -5465911 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 714 186 103 0 0 chrX 16957572 16957601 -5465226 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 714 23 33 0 0 chrX 16959277 16959307 -5463520 + AT_rich Low_complexity Low_complexity 1 30 0 1 714 222 62 0 0 chrX 16959392 16959424 -5463403 + (CCCCG)n Simple_repeat Simple_repeat 1 32 0 1 714 27 0 0 0 chrX 16960580 16960607 -5462220 + AT_rich Low_complexity Low_complexity 1 27 0 1 714 23 54 0 0 chrX 16961357 16961394 -5461433 + AT_rich Low_complexity Low_complexity 1 37 0 1 714 205 186 0 0 chrX 16962716 16962759 -5460068 + T-rich Low_complexity Low_complexity 1 43 0 1 714 28 0 0 0 chrX 16962770 16962798 -5460029 + AT_rich Low_complexity Low_complexity 1 28 0 1 714 210 164 55 0 chrX 16963031 16963086 -5459741 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 714 207 108 27 0 chrX 16963366 16963403 -5459424 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 714 25 65 0 0 chrX 16963548 16963594 -5459233 + AT_rich Low_complexity Low_complexity 1 46 0 1 714 204 163 20 20 chrX 16963672 16963722 -5459105 + (TTTCG)n Simple_repeat Simple_repeat 1 50 0 1 714 231 204 0 0 chrX 16965893 16965947 -5456880 + (CTG)n Simple_repeat Simple_repeat 1 54 0 1 714 204 264 0 0 chrX 16966119 16966172 -5456655 + (CCG)n Simple_repeat Simple_repeat 1 53 0 1 714 236 279 0 0 chrX 16967498 16967566 -5455261 + (CCG)n Simple_repeat Simple_repeat 2 69 0 1 714 25 0 0 0 chrX 16968397 16968422 -5454405 + AT_rich Low_complexity Low_complexity 1 25 0 1 714 192 182 0 0 chrX 16968892 16968936 -5453891 + (TTG)n Simple_repeat Simple_repeat 1 44 0 1 714 218 217 0 0 chrX 16968979 16969025 -5453802 + (TTG)n Simple_repeat Simple_repeat 2 47 0 1 714 291 113 0 0 chrX 16971057 16971110 -5451717 + (CTG)n Simple_repeat Simple_repeat 2 54 0 1 714 217 203 43 0 chrX 16971309 16971378 -5451449 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 714 205 220 0 39 chrX 16971593 16971645 -5451182 + (CGTG)n Simple_repeat Simple_repeat 1 50 0 1 714 27 73 0 0 chrX 16972147 16972202 -5450625 + AT_rich Low_complexity Low_complexity 1 55 0 1 714 31 44 0 0 chrX 16972407 16972452 -5450375 + AT_rich Low_complexity Low_complexity 1 45 0 1 714 32 26 0 0 chrX 16972480 16972519 -5450308 + AT_rich Low_complexity Low_complexity 1 39 0 1 714 21 36 0 0 chrX 16972725 16972753 -5450074 + AT_rich Low_complexity Low_complexity 1 28 0 1 714 24 67 0 0 chrX 16974168 16974213 -5448614 + AT_rich Low_complexity Low_complexity 1 45 0 1 714 23 97 0 0 chrX 16974906 16974978 -5447849 + AT_rich Low_complexity Low_complexity 1 72 0 1 714 228 86 0 0 chrX 16979735 16979770 -5443057 + (TCC)n Simple_repeat Simple_repeat 2 36 0 1 714 225 0 0 0 chrX 16981831 16981856 -5440971 + (TCC)n Simple_repeat Simple_repeat 1 25 0 1 714 33 25 0 0 chrX 16982189 16982229 -5440598 + AT_rich Low_complexity Low_complexity 1 40 0 1 714 22 0 0 0 chrX 16984799 16984821 -5438006 + AT_rich Low_complexity Low_complexity 1 22 0 1 714 22 56 0 0 chrX 16984985 16985021 -5437806 + AT_rich Low_complexity Low_complexity 1 36 0 1 714 203 258 0 0 chrX 16986044 16986106 -5436721 + T-rich Low_complexity Low_complexity 1 62 0 1 714 239 174 42 28 chrX 16986329 16986400 -5436427 + A-rich Low_complexity Low_complexity 4 75 0 1 714 21 0 0 0 chrX 16986674 16986695 -5436132 + AT_rich Low_complexity Low_complexity 1 21 0 1 714 24 0 0 0 chrX 16987011 16987035 -5435792 + AT_rich Low_complexity Low_complexity 1 24 0 1 714 224 0 65 0 chrX 16987227 16987258 -5435569 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 1 714 21 0 0 0 chrX 16992367 16992388 -5430439 + AT_rich Low_complexity Low_complexity 1 21 0 1 714 21 0 0 0 chrX 16993797 16993818 -5429009 + AT_rich Low_complexity Low_complexity 1 21 0 1 714 23 33 0 0 chrX 16995021 16995051 -5427776 + AT_rich Low_complexity Low_complexity 1 30 0 1 714 25 0 0 0 chrX 16995542 16995567 -5427260 + AT_rich Low_complexity Low_complexity 1 25 0 1 714 24 0 0 0 chrX 16995773 16995797 -5427030 + AT_rich Low_complexity Low_complexity 1 24 0 1 714 25 0 0 0 chrX 16997729 16997754 -5425073 + AT_rich Low_complexity Low_complexity 1 25 0 1 714 237 75 57 0 chrX 17000238 17000291 -5422536 + (TATAA)n Simple_repeat Simple_repeat 4 59 0 1 714 24 0 0 0 chrX 17000293 17000317 -5422510 + AT_rich Low_complexity Low_complexity 1 24 0 1 714 514 192 6 101 chrX 17000324 17000492 -5422335 - NINJA_LTR LTR Pao -165 152 1 1 714 22 0 0 0 chrX 17004341 17004363 -5418464 + AT_rich Low_complexity Low_complexity 1 22 0 1 714 235 218 0 0 chrX 17005867 17005922 -5416905 + CT-rich Low_complexity Low_complexity 1 55 0 1 714 21 0 0 0 chrX 17006952 17006973 -5415854 + AT_rich Low_complexity Low_complexity 1 21 0 1 714 28 29 0 0 chrX 17007475 17007510 -5415317 + AT_rich Low_complexity Low_complexity 1 35 0 1 714 192 125 0 0 chrX 17007545 17007577 -5415250 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 714 3790 5 0 0 chrX 17007836 17008253 -5414574 - TIRANT_LTR LTR Gypsy 0 417 1 1 714 595 42 0 0 chrX 17008253 17008324 -5414503 - TIRANT_I LTR Gypsy 0 7692 7622 1 714 41269 4 1 3 chrX 17008316 17012989 -5409838 - TIRANT_I LTR Gypsy -2919 4773 1 1 714 3790 5 0 0 chrX 17012989 17013406 -5409421 - TIRANT_LTR LTR Gypsy 0 417 1 1 714 23 0 0 0 chrX 17013932 17013955 -5408872 + AT_rich Low_complexity Low_complexity 1 23 0 1 714 354 23 0 0 chrX 17017037 17017080 -5405747 + (ATG)n Simple_repeat Simple_repeat 3 45 0 1 714 258 105 0 0 chrX 17018426 17018464 -5404363 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 1 714 203 182 0 0 chrX 17018726 17018759 -5404068 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1 714 26 64 0 0 chrX 17019701 17019748 -5403079 + AT_rich Low_complexity Low_complexity 1 47 0 1 714 28 29 0 0 chrX 17020119 17020154 -5402673 + AT_rich Low_complexity Low_complexity 1 35 0 1 714 22 56 0 0 chrX 17023483 17023519 -5399308 + AT_rich Low_complexity Low_complexity 1 36 0 1 714 37 39 0 0 chrX 17024240 17024291 -5398536 + AT_rich Low_complexity Low_complexity 1 51 0 1 714 21 71 0 0 chrX 17024750 17024792 -5398035 + AT_rich Low_complexity Low_complexity 1 42 0 1 714 195 42 0 0 chrX 17025144 17025168 -5397659 + (CAA)n Simple_repeat Simple_repeat 3 26 0 1 714 23 0 0 0 chrX 17025208 17025231 -5397596 + AT_rich Low_complexity Low_complexity 1 23 0 1 714 29 0 0 0 chrX 17026245 17026274 -5396553 + AT_rich Low_complexity Low_complexity 1 29 0 1 714 32 57 0 0 chrX 17026753 17026806 -5396021 + AT_rich Low_complexity Low_complexity 1 53 0 1 714 27 29 0 0 chrX 17028067 17028101 -5394726 + AT_rich Low_complexity Low_complexity 1 34 0 1 714 278 102 409 0 chrX 17031578 17031666 -5391161 - DMCR1A LINE CR1 -1257 3213 3090 1 714 705 34 0 0 chrX 17037858 17037946 -5384881 + BS LINE Jockey 5036 5123 -3 1 715 220 284 37 0 chrX 17043882 17043963 -5378864 + C-rich Low_complexity Low_complexity 2 85 0 1 715 24 0 0 0 chrX 17045447 17045471 -5377356 + AT_rich Low_complexity Low_complexity 1 24 0 1 715 27 49 0 0 chrX 17047008 17047049 -5375778 + AT_rich Low_complexity Low_complexity 1 41 0 1 715 32 0 0 0 chrX 17048257 17048289 -5374538 + AT_rich Low_complexity Low_complexity 1 32 0 1 715 21 57 0 0 chrX 17053571 17053606 -5369221 + AT_rich Low_complexity Low_complexity 1 35 0 1 715 180 77 0 0 chrX 17054842 17054868 -5367959 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 715 266 259 0 0 chrX 17060036 17060094 -5362733 + (CCCGAA)n Simple_repeat Simple_repeat 1 58 0 1 715 195 100 0 0 chrX 17060199 17060229 -5362598 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 715 492 148 37 0 chrX 17061481 17061562 -5361265 - DNAREP1_DM LINE Penelope -510 84 1 1 715 23 0 0 0 chrX 17061907 17061930 -5360897 + AT_rich Low_complexity Low_complexity 1 23 0 1 715 21 36 0 0 chrX 17062480 17062508 -5360319 + AT_rich Low_complexity Low_complexity 1 28 0 1 715 30 0 0 0 chrX 17062682 17062712 -5360115 + AT_rich Low_complexity Low_complexity 1 30 0 1 715 225 95 95 0 chrX 17064615 17064678 -5358149 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 715 51 70 0 0 chrX 17066728 17066828 -5355999 + AT_rich Low_complexity Low_complexity 1 100 0 1 715 252 100 0 0 chrX 17066985 17067025 -5355802 + (ATTG)n Simple_repeat Simple_repeat 4 43 0 1 715 245 118 28 42 chrX 17067994 17068065 -5354762 + (GTTTG)n Simple_repeat Simple_repeat 2 71 0 1 715 29 0 0 0 chrX 17068349 17068378 -5354449 + AT_rich Low_complexity Low_complexity 1 29 0 1 715 25 0 0 0 chrX 17069775 17069800 -5353027 + AT_rich Low_complexity Low_complexity 1 25 0 1 715 24 0 0 0 chrX 17070124 17070148 -5352679 + AT_rich Low_complexity Low_complexity 1 24 0 1 715 202 211 0 37 chrX 17070407 17070461 -5352366 + A-rich Low_complexity Low_complexity 1 52 0 1 715 276 53 0 0 chrX 17070633 17070671 -5352156 + (A)n Simple_repeat Simple_repeat 1 38 0 1 715 29 28 0 0 chrX 17073472 17073508 -5349319 + AT_rich Low_complexity Low_complexity 1 36 0 1 715 34 24 0 0 chrX 17076908 17076949 -5345878 + AT_rich Low_complexity Low_complexity 1 41 0 1 715 26 0 0 0 chrX 17078227 17078253 -5344574 + AT_rich Low_complexity Low_complexity 1 26 0 1 715 246 173 19 0 chrX 17079164 17079216 -5343611 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 1 715 222 37 0 0 chrX 17080026 17080053 -5342774 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 715 23 86 0 0 chrX 17081313 17081371 -5341456 + AT_rich Low_complexity Low_complexity 1 58 0 1 715 28 71 0 0 chrX 17081713 17081769 -5341058 + AT_rich Low_complexity Low_complexity 1 56 0 1 715 21 0 0 0 chrX 17082004 17082025 -5340802 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 21 0 0 0 chrX 17082941 17082962 -5339865 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 212 231 0 0 chrX 17085541 17085593 -5337234 + (CAG)n Simple_repeat Simple_repeat 1 52 0 1 715 256 191 15 0 chrX 17086809 17086877 -5335950 + ROO_I LTR Pao 653 721 -7535 1 715 200 128 26 0 chrX 17087267 17087306 -5335521 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 715 204 218 0 18 chrX 17087458 17087514 -5335313 + C-rich Low_complexity Low_complexity 4 58 0 1 715 201 132 0 0 chrX 17088303 17088341 -5334486 + (CAG)n Simple_repeat Simple_repeat 3 40 0 1 715 216 67 0 0 chrX 17088771 17088801 -5334026 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 715 2325 11 7 11 chrX 17089291 17089567 -5333260 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 715 41599 1 1 0 chrX 17089567 17094044 -5328783 - BLASTOPIA_I LTR Gypsy 0 4481 1 1 715 2325 11 7 11 chrX 17094044 17094320 -5328507 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 715 23 33 0 0 chrX 17098844 17098874 -5323953 + AT_rich Low_complexity Low_complexity 1 30 0 1 715 35 41 0 0 chrX 17099545 17099594 -5323233 + AT_rich Low_complexity Low_complexity 1 49 0 1 715 267 323 0 0 chrX 17100609 17100708 -5322119 + (CGG)n Simple_repeat Simple_repeat 2 100 0 1 715 224 338 0 0 chrX 17100782 17100850 -5321977 + (CGG)n Simple_repeat Simple_repeat 1 68 0 1 715 260 238 11 75 chrX 17101052 17101238 -5321589 + (CTCCG)n Simple_repeat Simple_repeat 2 175 0 1 715 21 82 0 0 chrX 17103381 17103430 -5319397 + AT_rich Low_complexity Low_complexity 1 49 0 1 715 34 89 0 0 chrX 17105394 17105484 -5317343 + AT_rich Low_complexity Low_complexity 1 90 0 1 715 403 198 12 0 chrX 17105837 17105918 -5316909 - DNAREP1_DM LINE Penelope -2 592 511 1 715 234 105 0 0 chrX 17106256 17106294 -5316533 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 715 51 70 0 0 chrX 17108602 17108702 -5314125 + AT_rich Low_complexity Low_complexity 1 100 0 1 715 204 40 0 0 chrX 17109241 17109266 -5313561 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 715 183 162 0 0 chrX 17112766 17112803 -5310024 + (GCCTG)n Simple_repeat Simple_repeat 3 39 0 1 715 26 0 0 0 chrX 17114076 17114102 -5308725 + AT_rich Low_complexity Low_complexity 1 26 0 1 715 312 188 0 0 chrX 17115648 17115717 -5307110 + (TGG)n Simple_repeat Simple_repeat 2 70 0 1 715 202 358 0 0 chrX 17116415 17116496 -5306331 + (CGG)n Simple_repeat Simple_repeat 2 82 0 1 715 219 170 0 54 chrX 17116439 17116495 -5306332 + (TGG)n Simple_repeat Simple_repeat 2 54 0 1 715 22 0 0 0 chrX 17116936 17116958 -5305869 + AT_rich Low_complexity Low_complexity 1 22 0 1 715 22 0 0 0 chrX 17118308 17118330 -5304497 + AT_rich Low_complexity Low_complexity 1 22 0 1 715 31 68 0 0 chrX 17118383 17118442 -5304385 + AT_rich Low_complexity Low_complexity 1 59 0 1 715 206 191 0 56 chrX 17119097 17119169 -5303658 + T-rich Low_complexity Low_complexity 1 68 0 1 715 28 0 0 0 chrX 17119800 17119828 -5302999 + AT_rich Low_complexity Low_complexity 1 28 0 1 715 359 312 6 6 chrX 17120166 17120343 -5302484 + (CCG)n Simple_repeat Simple_repeat 2 178 0 1 715 203 313 0 32 chrX 17124574 17124759 -5298068 + (CCA)n Simple_repeat Simple_repeat 2 180 0 1 715 29 0 0 0 chrX 17125196 17125225 -5297602 + AT_rich Low_complexity Low_complexity 1 29 0 1 715 183 114 0 0 chrX 17125520 17125555 -5297272 + (T)n Simple_repeat Simple_repeat 1 35 0 1 715 1805 113 66 21 chrX 17125890 17126178 -5296649 - DNAREP1_DM LINE Penelope -1 593 293 1 715 423 20 0 38 chrX 17126203 17126256 -5296571 - DNAREP1_DM LINE Penelope -543 51 1 1 715 22 0 0 0 chrX 17127876 17127898 -5294929 + AT_rich Low_complexity Low_complexity 1 22 0 1 715 30 27 0 0 chrX 17128615 17128652 -5294175 + AT_rich Low_complexity Low_complexity 1 37 0 1 715 23 54 0 0 chrX 17129641 17129678 -5293149 + AT_rich Low_complexity Low_complexity 1 37 0 1 715 21 0 0 0 chrX 17129737 17129758 -5293069 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 227 164 0 35 chrX 17131590 17131647 -5291180 + A-rich Low_complexity Low_complexity 2 56 0 1 715 195 204 0 0 chrX 17131839 17131883 -5290944 + (TTG)n Simple_repeat Simple_repeat 1 44 0 1 715 21 0 0 0 chrX 17132055 17132076 -5290751 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 28 29 0 0 chrX 17132515 17132550 -5290277 + AT_rich Low_complexity Low_complexity 1 35 0 1 715 25 51 0 0 chrX 17132566 17132605 -5290222 + AT_rich Low_complexity Low_complexity 1 39 0 1 715 273 128 0 0 chrX 17133079 17133126 -5289701 + (CAACC)n Simple_repeat Simple_repeat 5 51 0 1 715 222 205 0 0 chrX 17133136 17133175 -5289652 + (TATG)n Simple_repeat Simple_repeat 1 39 0 1 715 228 326 10 10 chrX 17139820 17139916 -5282911 + G2_DM LINE Jockey 2568 2663 -439 1 715 588 228 0 82 chrX 17139948 17140106 -5282721 + G7_DM LINE Jockey 886 1030 -162 1 715 21 0 0 0 chrX 17140516 17140537 -5282290 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 22 0 0 0 chrX 17141364 17141386 -5281441 + AT_rich Low_complexity Low_complexity 1 22 0 1 715 849 120 0 0 chrX 17141520 17141645 -5281182 + DNAREP1_DM LINE Penelope 1 125 -469 1 715 813 73 53 0 chrX 17141643 17141831 -5280996 + DNAREP1_DM LINE Penelope 327 584 -10 1 715 30 0 0 0 chrX 17142026 17142056 -5280771 + AT_rich Low_complexity Low_complexity 1 30 0 1 715 201 324 0 0 chrX 17142661 17142769 -5280058 + (TCG)n Simple_repeat Simple_repeat 1 108 0 1 715 307 171 0 0 chrX 17143877 17143953 -5278874 + ROO_I LTR Pao 652 727 -7529 1 715 201 39 0 0 chrX 17146575 17146601 -5276226 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 1 715 22 35 0 0 chrX 17148403 17148432 -5274395 + AT_rich Low_complexity Low_complexity 1 29 0 1 715 24 0 0 0 chrX 17148836 17148860 -5273967 + AT_rich Low_complexity Low_complexity 1 24 0 1 715 34 79 0 0 chrX 17150199 17150275 -5272552 + AT_rich Low_complexity Low_complexity 1 76 0 1 715 27 96 0 0 chrX 17151919 17152002 -5270825 + AT_rich Low_complexity Low_complexity 1 83 0 1 715 22 35 0 0 chrX 17152878 17152907 -5269920 + AT_rich Low_complexity Low_complexity 1 29 0 1 715 25 0 0 0 chrX 17152959 17152984 -5269843 + AT_rich Low_complexity Low_complexity 1 25 0 1 715 339 250 17 17 chrX 17153053 17153171 -5269656 + (CAA)n Simple_repeat Simple_repeat 2 119 0 1 715 24 32 0 0 chrX 17156194 17156225 -5266602 + AT_rich Low_complexity Low_complexity 1 31 0 1 715 1640 74 0 0 chrX 17156368 17156584 -5266243 - BS2 LINE Jockey -174 4547 4332 1 715 23 33 0 0 chrX 17158414 17158444 -5264383 + AT_rich Low_complexity Low_complexity 1 30 0 1 715 32 57 0 0 chrX 17158705 17158758 -5264069 + AT_rich Low_complexity Low_complexity 1 53 0 1 715 420 91 0 0 chrX 17159509 17159575 -5263252 + (CAG)n Simple_repeat Simple_repeat 1 66 0 1 715 195 114 0 0 chrX 17159761 17159796 -5263031 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 715 29 0 0 0 chrX 17160769 17160798 -5262029 + AT_rich Low_complexity Low_complexity 1 29 0 1 715 21 57 0 0 chrX 17163374 17163409 -5259418 + AT_rich Low_complexity Low_complexity 1 35 0 1 715 37 0 0 0 chrX 17164343 17164380 -5258447 + AT_rich Low_complexity Low_complexity 1 37 0 1 715 276 172 11 33 chrX 17165580 17165670 -5257157 + ROO_I LTR Pao 641 728 -7528 1 715 229 314 9 0 chrX 17166324 17166429 -5256398 + ROO_I LTR Pao 632 737 -7519 1 715 307 205 48 16 chrX 17166508 17166632 -5256195 + ROO_I LTR Pao 629 756 -7500 1 715 249 220 0 91 chrX 17166930 17167040 -5255787 + ROO_I LTR Pao 657 756 -7500 1 715 230 219 13 52 chrX 17167253 17167330 -5255497 + ROO_I LTR Pao 653 726 -7530 1 715 24 32 0 0 chrX 17170010 17170041 -5252786 + AT_rich Low_complexity Low_complexity 1 31 0 1 716 27 29 0 0 chrX 17171155 17171189 -5251638 + AT_rich Low_complexity Low_complexity 1 34 0 1 716 24 77 0 0 chrX 17171229 17171281 -5251546 + AT_rich Low_complexity Low_complexity 1 52 0 1 716 29 0 0 0 chrX 17172365 17172394 -5250433 + AT_rich Low_complexity Low_complexity 1 29 0 1 716 180 0 0 0 chrX 17174498 17174518 -5248309 + (T)n Simple_repeat Simple_repeat 1 20 0 1 716 1203 176 123 21 chrX 17174998 17175420 -5247407 + DNAREP1_DM LINE Penelope 1 593 -1 1 716 23 68 0 0 chrX 17177456 17177500 -5245327 + AT_rich Low_complexity Low_complexity 1 44 0 1 716 347 94 0 0 chrX 17177582 17177635 -5245192 + DNAREP1_DM LINE Penelope 211 263 -331 1 716 325 70 5 21 chrX 17177633 17177687 -5245140 + DNAREP1_DM LINE Penelope 449 487 -107 1 716 24 32 0 0 chrX 17179019 17179050 -5243777 + AT_rich Low_complexity Low_complexity 1 31 0 1 716 21 36 0 0 chrX 17180009 17180037 -5242790 + AT_rich Low_complexity Low_complexity 1 28 0 1 716 256 241 12 12 chrX 17180132 17180212 -5242615 + (TA)n Simple_repeat Simple_repeat 2 81 0 1 716 42 48 0 0 chrX 17180489 17180552 -5242275 + AT_rich Low_complexity Low_complexity 1 63 0 1 716 220 220 0 0 chrX 17183586 17183636 -5239191 + A-rich Low_complexity Low_complexity 1 50 0 1 716 21 0 0 0 chrX 17184178 17184199 -5238628 + AT_rich Low_complexity Low_complexity 1 21 0 1 716 227 297 11 11 chrX 17192331 17192423 -5230404 + A-rich Low_complexity Low_complexity 1 92 0 1 716 26 30 0 0 chrX 17192570 17192603 -5230224 + AT_rich Low_complexity Low_complexity 1 33 0 1 716 25 0 0 0 chrX 17193149 17193174 -5229653 + AT_rich Low_complexity Low_complexity 1 25 0 1 716 21 0 0 0 chrX 17195552 17195573 -5227254 + AT_rich Low_complexity Low_complexity 1 21 0 1 716 261 0 0 0 chrX 17200132 17200161 -5222666 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 716 324 175 0 0 chrX 17202611 17202674 -5220153 + (ATTCG)n Simple_repeat Simple_repeat 2 64 0 1 716 186 71 0 0 chrX 17203050 17203078 -5219749 + (TATCG)n Simple_repeat Simple_repeat 3 30 0 1 716 31 26 0 0 chrX 17204077 17204115 -5218712 + AT_rich Low_complexity Low_complexity 1 38 0 1 716 402 125 0 0 chrX 17204290 17204346 -5218481 + DNAREP1_DM LINE Penelope 1 56 -538 1 716 824 172 80 7 chrX 17204359 17204540 -5218287 + DNAREP1_DM LINE Penelope 431 594 0 1 716 180 0 0 0 chrX 17205333 17205353 -5217474 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 716 21 36 0 0 chrX 17206748 17206776 -5216051 + AT_rich Low_complexity Low_complexity 1 28 0 1 716 241 117 0 62 chrX 17208524 17208588 -5214239 - ROO_I LTR Pao -7520 736 677 1 716 228 267 0 0 chrX 17209096 17209156 -5213671 + (CGG)n Simple_repeat Simple_repeat 2 61 0 1 716 312 133 0 0 chrX 17209235 17209295 -5213532 + (CAG)n Simple_repeat Simple_repeat 1 60 0 1 716 240 111 0 0 chrX 17209480 17209516 -5213311 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 716 352 189 31 31 chrX 17209747 17209845 -5212982 + ROO_I LTR Pao 641 738 -7518 1 716 22 35 0 0 chrX 17210033 17210062 -5212765 + AT_rich Low_complexity Low_complexity 1 29 0 1 716 189 0 0 0 chrX 17210236 17210257 -5212570 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 716 200 217 0 0 chrX 17210841 17210887 -5211940 + (TTG)n Simple_repeat Simple_repeat 1 46 0 1 716 213 325 0 12 chrX 17211028 17211109 -5211718 + CT-rich Low_complexity Low_complexity 1 80 0 1 716 22 0 0 0 chrX 17212148 17212170 -5210657 + AT_rich Low_complexity Low_complexity 1 22 0 1 716 24 32 0 0 chrX 17214163 17214194 -5208633 + AT_rich Low_complexity Low_complexity 1 31 0 1 716 201 74 0 0 chrX 17214461 17214488 -5208339 + (CAG)n Simple_repeat Simple_repeat 1 27 0 1 716 25 0 0 0 chrX 17216621 17216646 -5206181 + AT_rich Low_complexity Low_complexity 1 25 0 1 716 224 299 0 11 chrX 17217227 17217315 -5205512 + GA-rich Low_complexity Low_complexity 2 88 0 1 716 22 0 0 0 chrX 17217466 17217488 -5205339 + AT_rich Low_complexity Low_complexity 1 22 0 1 716 24 53 0 0 chrX 17217982 17218020 -5204807 + AT_rich Low_complexity Low_complexity 1 38 0 1 716 38 85 0 0 chrX 17220584 17220678 -5202149 + AT_rich Low_complexity Low_complexity 1 94 0 1 716 23 0 0 0 chrX 17222680 17222703 -5200124 + AT_rich Low_complexity Low_complexity 1 23 0 1 716 236 185 0 18 chrX 17224987 17225042 -5197785 + (CGA)n Simple_repeat Simple_repeat 2 55 0 1 716 212 122 0 24 chrX 17225052 17225094 -5197733 + (ATTCG)n Simple_repeat Simple_repeat 4 44 0 1 716 27 29 0 0 chrX 17226619 17226653 -5196174 + AT_rich Low_complexity Low_complexity 1 34 0 1 716 22 35 0 0 chrX 17233635 17233664 -5189163 + AT_rich Low_complexity Low_complexity 1 29 0 1 716 224 245 0 0 chrX 17235288 17235341 -5187486 + A-rich Low_complexity Low_complexity 1 53 0 1 716 29 0 0 0 chrX 17237279 17237308 -5185519 + AT_rich Low_complexity Low_complexity 1 29 0 1 716 21 0 0 0 chrX 17238343 17238364 -5184463 + AT_rich Low_complexity Low_complexity 1 21 0 1 716 24 67 0 0 chrX 17239203 17239248 -5183579 + AT_rich Low_complexity Low_complexity 1 45 0 1 716 202 208 0 0 chrX 17240234 17240282 -5182545 + CT-rich Low_complexity Low_complexity 1 48 0 1 716 268 243 0 0 chrX 17240351 17240421 -5182406 + T-rich Low_complexity Low_complexity 1 70 0 1 716 24 0 0 0 chrX 17241955 17241979 -5180848 + AT_rich Low_complexity Low_complexity 1 24 0 1 716 1600 221 64 40 chrX 17241998 17242627 -5180200 + SAR_DM Satellite Satellite 1 644 -313 1 716 207 114 0 0 chrX 17242977 17243012 -5179815 + (TATCG)n Simple_repeat Simple_repeat 2 36 0 1 716 183 184 0 0 chrX 17244984 17245022 -5177805 + (CCCGAA)n Simple_repeat Simple_repeat 2 39 0 1 716 211 244 0 0 chrX 17247255 17247300 -5175527 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 716 213 121 0 0 chrX 17247441 17247474 -5175353 + (GTCTG)n Simple_repeat Simple_repeat 2 34 0 1 716 44 75 0 0 chrX 17247844 17247937 -5174890 + AT_rich Low_complexity Low_complexity 1 93 0 1 716 207 0 0 0 chrX 17252124 17252147 -5170680 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 716 22 0 0 0 chrX 17256781 17256803 -5166024 + AT_rich Low_complexity Low_complexity 1 22 0 1 716 216 143 0 0 chrX 17259000 17259042 -5163785 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 716 330 152 0 0 chrX 17260946 17261005 -5161822 + (ATGTG)n Simple_repeat Simple_repeat 3 61 0 1 716 28 0 0 0 chrX 17262322 17262350 -5160477 + AT_rich Low_complexity Low_complexity 1 28 0 1 716 280 237 0 13 chrX 17264130 17264207 -5158620 + T-rich Low_complexity Low_complexity 2 77 0 1 716 33 0 0 0 chrX 17264596 17264629 -5158198 + AT_rich Low_complexity Low_complexity 1 33 0 1 716 26 30 0 0 chrX 17264695 17264728 -5158099 + AT_rich Low_complexity Low_complexity 1 33 0 1 716 290 26 0 25 chrX 17269080 17269120 -5153707 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 716 213 216 28 28 chrX 17270291 17270373 -5152454 + T-rich Low_complexity Low_complexity 1 82 0 1 716 267 322 0 0 chrX 17273894 17273981 -5148846 + (TGAG)n Simple_repeat Simple_repeat 1 87 0 1 716 186 143 0 0 chrX 17275182 17275217 -5147610 + (CATTC)n Simple_repeat Simple_repeat 1 35 0 1 716 36 82 0 0 chrX 17275709 17275794 -5147033 + AT_rich Low_complexity Low_complexity 1 85 0 1 716 21 0 0 0 chrX 17276633 17276654 -5146173 + AT_rich Low_complexity Low_complexity 1 21 0 1 716 21 0 0 0 chrX 17276808 17276829 -5145998 + AT_rich Low_complexity Low_complexity 1 21 0 1 716 219 225 14 27 chrX 17277494 17277567 -5145260 + CT-rich Low_complexity Low_complexity 1 72 0 1 716 254 279 0 0 chrX 17277661 17277729 -5145098 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 716 255 61 0 0 chrX 17279718 17279751 -5143076 + (CCA)n Simple_repeat Simple_repeat 1 33 0 1 716 24 0 0 0 chrX 17282248 17282272 -5140555 + AT_rich Low_complexity Low_complexity 1 24 0 1 716 42 20 0 0 chrX 17285234 17285283 -5137544 + AT_rich Low_complexity Low_complexity 1 49 0 1 716 23 0 0 0 chrX 17285507 17285530 -5137297 + AT_rich Low_complexity Low_complexity 1 23 0 1 716 189 0 0 0 chrX 17285932 17285953 -5136874 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 716 22 56 0 0 chrX 17287414 17287450 -5135377 + AT_rich Low_complexity Low_complexity 1 36 0 1 716 246 246 0 0 chrX 17289725 17289786 -5133041 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 1 716 22 0 0 0 chrX 17290078 17290100 -5132727 + AT_rich Low_complexity Low_complexity 1 22 0 1 716 259 324 10 0 chrX 17292003 17292105 -5130722 + (CAG)n Simple_repeat Simple_repeat 2 104 0 1 716 286 156 0 38 chrX 17292316 17292396 -5130431 + (CTG)n Simple_repeat Simple_repeat 1 77 0 1 716 33 43 0 0 chrX 17294084 17294131 -5128696 + AT_rich Low_complexity Low_complexity 1 47 0 1 716 223 290 0 0 chrX 17296950 17297012 -5125815 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 716 40 101 0 0 chrX 17300556 17300694 -5122133 + AT_rich Low_complexity Low_complexity 1 138 0 1 717 189 132 0 0 chrX 17303216 17303254 -5119573 + (T)n Simple_repeat Simple_repeat 1 38 0 1 717 273 159 0 0 chrX 17303831 17303894 -5118933 + (CCCA)n Simple_repeat Simple_repeat 2 64 0 1 717 47 44 0 0 chrX 17305599 17305667 -5117160 + AT_rich Low_complexity Low_complexity 1 68 0 1 717 23 33 0 0 chrX 17306196 17306226 -5116601 + AT_rich Low_complexity Low_complexity 1 30 0 1 717 204 111 0 0 chrX 17309668 17309704 -5113123 + (CGATG)n Simple_repeat Simple_repeat 3 38 0 1 717 22 56 0 0 chrX 17309881 17309917 -5112910 + AT_rich Low_complexity Low_complexity 1 36 0 1 717 23 33 0 0 chrX 17316343 17316373 -5106454 + AT_rich Low_complexity Low_complexity 1 30 0 1 717 22 56 0 0 chrX 17324169 17324205 -5098622 + AT_rich Low_complexity Low_complexity 1 36 0 1 717 180 77 0 0 chrX 17325395 17325421 -5097406 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 717 2177 0 0 26 chrX 17325454 17325722 -5097105 - LINEJ1_DM LINE Jockey 0 5020 4760 1 717 29 47 0 0 chrX 17328552 17328595 -5094232 + AT_rich Low_complexity Low_complexity 1 43 0 1 717 39 50 0 0 chrX 17330640 17330700 -5092127 + AT_rich Low_complexity Low_complexity 1 60 0 1 717 28 29 0 0 chrX 17333825 17333860 -5088967 + AT_rich Low_complexity Low_complexity 1 35 0 1 717 225 0 0 0 chrX 17335671 17335696 -5087131 + (CAGC)n Simple_repeat Simple_repeat 3 27 0 1 717 22 0 0 0 chrX 17335870 17335892 -5086935 + AT_rich Low_complexity Low_complexity 1 22 0 1 717 23 78 0 0 chrX 17338295 17338346 -5084481 + AT_rich Low_complexity Low_complexity 1 51 0 1 717 21 36 0 0 chrX 17339234 17339262 -5083565 + AT_rich Low_complexity Low_complexity 1 28 0 1 717 225 0 0 0 chrX 17339703 17339728 -5083099 + (T)n Simple_repeat Simple_repeat 1 25 0 1 717 26 30 0 0 chrX 17339965 17339998 -5082829 + AT_rich Low_complexity Low_complexity 1 33 0 1 717 28 29 0 0 chrX 17341091 17341126 -5081701 + AT_rich Low_complexity Low_complexity 1 35 0 1 717 366 211 0 0 chrX 17343404 17343513 -5079314 + CT-rich Low_complexity Low_complexity 1 109 0 1 717 282 333 0 0 chrX 17343554 17343653 -5079174 + CT-rich Low_complexity Low_complexity 3 101 0 1 717 200 289 10 20 chrX 17343760 17343859 -5078968 + CT-rich Low_complexity Low_complexity 1 98 0 1 717 288 200 0 0 chrX 17343900 17343975 -5078852 + (TTG)n Simple_repeat Simple_repeat 3 77 0 1 717 204 250 47 0 chrX 17344068 17344132 -5078695 + (TCTCTG)n Simple_repeat Simple_repeat 2 68 0 1 717 317 93 0 18 chrX 17346741 17346796 -5076031 + (CAG)n Simple_repeat Simple_repeat 3 56 0 1 717 67 55 0 0 chrX 17347014 17347123 -5075704 + AT_rich Low_complexity Low_complexity 1 109 0 1 717 35 0 0 0 chrX 17347257 17347292 -5075535 + AT_rich Low_complexity Low_complexity 1 35 0 1 717 239 343 23 11 chrX 17347396 17347573 -5075254 + (TTG)n Simple_repeat Simple_repeat 1 179 0 1 717 244 342 8 17 chrX 17347443 17347562 -5075265 + (CTG)n Simple_repeat Simple_repeat 2 119 0 1 717 230 231 0 19 chrX 17347684 17347737 -5075090 + (CTG)n Simple_repeat Simple_repeat 3 54 0 1 717 186 71 0 0 chrX 17347783 17347811 -5075016 + (CACTC)n Simple_repeat Simple_repeat 3 30 0 1 717 219 283 0 0 chrX 17348637 17348690 -5074137 + A-rich Low_complexity Low_complexity 3 55 0 1 717 35 0 0 0 chrX 17349570 17349605 -5073222 + AT_rich Low_complexity Low_complexity 1 35 0 1 717 35 24 0 0 chrX 17349868 17349910 -5072917 + AT_rich Low_complexity Low_complexity 1 42 0 1 717 31 0 0 0 chrX 17350181 17350212 -5072615 + AT_rich Low_complexity Low_complexity 1 31 0 1 717 195 42 0 0 chrX 17350437 17350461 -5072366 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 717 24 32 0 0 chrX 17350568 17350599 -5072228 + AT_rich Low_complexity Low_complexity 1 31 0 1 717 189 94 0 0 chrX 17352133 17352165 -5070662 + (CTG)n Simple_repeat Simple_repeat 2 33 0 1 717 242 182 0 15 chrX 17356526 17356593 -5066234 + (TTGG)n Simple_repeat Simple_repeat 2 67 0 1 717 42 20 0 0 chrX 17357416 17357465 -5065362 + AT_rich Low_complexity Low_complexity 1 49 0 1 717 297 89 0 0 chrX 17358820 17358865 -5063962 + (CTG)n Simple_repeat Simple_repeat 1 45 0 1 717 29 60 0 0 chrX 17358998 17359048 -5063779 + AT_rich Low_complexity Low_complexity 1 50 0 1 717 210 71 0 0 chrX 17364943 17364971 -5057856 + (CAGT)n Simple_repeat Simple_repeat 1 28 0 1 717 27 29 0 0 chrX 17365729 17365763 -5057064 + AT_rich Low_complexity Low_complexity 1 34 0 1 717 213 39 0 0 chrX 17365977 17366003 -5056824 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 717 21 36 0 0 chrX 17366972 17367000 -5055827 + AT_rich Low_complexity Low_complexity 1 28 0 1 717 237 139 0 0 chrX 17367448 17367491 -5055336 + (T)n Simple_repeat Simple_repeat 1 43 0 1 717 26 50 0 0 chrX 17367648 17367688 -5055139 + AT_rich Low_complexity Low_complexity 1 40 0 1 717 189 107 0 0 chrX 17368896 17368924 -5053903 + (ATTTG)n Simple_repeat Simple_repeat 2 29 0 1 717 381 129 0 0 chrX 17370650 17370720 -5052107 + (ATG)n Simple_repeat Simple_repeat 1 70 0 1 717 189 74 0 0 chrX 17371680 17371707 -5051120 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 717 423 119 0 0 chrX 17373988 17374055 -5048772 + (ACCG)n Simple_repeat Simple_repeat 4 70 0 1 717 203 175 0 0 chrX 17374366 17374406 -5048421 + T-rich Low_complexity Low_complexity 1 40 0 1 717 23 0 0 0 chrX 17376825 17376848 -5045979 + AT_rich Low_complexity Low_complexity 1 23 0 1 717 21 0 0 0 chrX 17377315 17377336 -5045491 + AT_rich Low_complexity Low_complexity 1 21 0 1 717 22 35 0 0 chrX 17378399 17378428 -5044399 + AT_rich Low_complexity Low_complexity 1 29 0 1 717 204 40 0 0 chrX 17378604 17378629 -5044198 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 717 209 180 20 0 chrX 17378721 17378771 -5044056 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 717 243 0 0 0 chrX 17379930 17379957 -5042870 + (GAATG)n Simple_repeat Simple_repeat 4 30 0 1 717 21 0 0 0 chrX 17380003 17380024 -5042803 + AT_rich Low_complexity Low_complexity 1 21 0 1 717 195 100 0 0 chrX 17380292 17380322 -5042505 + (T)n Simple_repeat Simple_repeat 1 30 0 1 717 22 35 0 0 chrX 17382174 17382203 -5040624 + AT_rich Low_complexity Low_complexity 1 29 0 1 717 250 233 66 11 chrX 17382562 17382653 -5040174 + A-rich Low_complexity Low_complexity 2 97 0 1 717 225 119 0 0 chrX 17382809 17382851 -5039976 + (CACAT)n Simple_repeat Simple_repeat 1 42 0 1 717 206 105 68 34 chrX 17383810 17383869 -5038958 + (TGGG)n Simple_repeat Simple_repeat 2 62 0 1 717 206 279 0 16 chrX 17385982 17386044 -5036783 + A-rich Low_complexity Low_complexity 4 64 0 1 717 255 157 0 0 chrX 17387063 17387114 -5035713 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1 717 305 196 0 0 chrX 17387759 17387815 -5035012 - DNAREP1_DM LINE Penelope 0 594 539 1 717 307 180 16 0 chrX 17387891 17387952 -5034875 - DNAREP1_DM LINE Penelope -532 62 1 1 717 375 145 0 0 chrX 17388126 17388195 -5034632 + (ACTG)n Simple_repeat Simple_repeat 1 69 0 1 717 32 0 0 0 chrX 17389467 17389499 -5033328 + AT_rich Low_complexity Low_complexity 1 32 0 1 717 35 0 0 0 chrX 17393871 17393906 -5028921 + AT_rich Low_complexity Low_complexity 1 35 0 1 717 216 158 0 0 chrX 17395452 17395490 -5027337 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 717 288 0 0 0 chrX 17395987 17396019 -5026808 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 717 204 40 0 0 chrX 17396746 17396771 -5026056 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 717 189 107 0 0 chrX 17398551 17398579 -5024248 + (CATA)n Simple_repeat Simple_repeat 2 29 0 1 717 233 171 0 0 chrX 17398703 17398744 -5024083 - TRANSIB2 DNA Transib -275 2569 2529 1 717 262 255 10 20 chrX 17400641 17400741 -5022086 + T-rich Low_complexity Low_complexity 5 103 0 1 717 23 54 0 0 chrX 17402206 17402243 -5020584 + AT_rich Low_complexity Low_complexity 1 37 0 1 717 261 0 0 0 chrX 17406194 17406223 -5016604 + (A)n Simple_repeat Simple_repeat 1 29 0 1 717 22 56 0 0 chrX 17407955 17407991 -5014836 + AT_rich Low_complexity Low_complexity 1 36 0 1 717 225 259 0 0 chrX 17408253 17408311 -5014516 + A-rich Low_complexity Low_complexity 5 62 0 1 717 282 143 0 0 chrX 17408924 17408973 -5013854 + (CAGAC)n Simple_repeat Simple_repeat 3 51 0 1 717 282 73 0 0 chrX 17409271 17409312 -5013515 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 717 219 36 0 0 chrX 17409712 17409740 -5013087 + (GAGTG)n Simple_repeat Simple_repeat 2 29 0 1 717 23 33 0 0 chrX 17410962 17410992 -5011835 + AT_rich Low_complexity Low_complexity 1 30 0 1 717 21 57 0 0 chrX 17414413 17414448 -5008379 + AT_rich Low_complexity Low_complexity 1 35 0 1 717 195 42 0 0 chrX 17415342 17415366 -5007461 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 717 213 128 0 25 chrX 17415630 17415670 -5007157 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 717 195 114 0 0 chrX 17415971 17416006 -5006821 + (T)n Simple_repeat Simple_repeat 1 35 0 1 717 216 0 0 0 chrX 17416148 17416172 -5006655 + (T)n Simple_repeat Simple_repeat 1 24 0 1 717 186 71 0 0 chrX 17416778 17416806 -5006021 + (A)n Simple_repeat Simple_repeat 1 28 0 1 717 288 127 0 0 chrX 17419817 17419872 -5002955 + (CAGC)n Simple_repeat Simple_repeat 4 58 0 1 717 186 43 0 0 chrX 17420142 17420165 -5002662 + (T)n Simple_repeat Simple_repeat 1 23 0 1 717 23 0 0 0 chrX 17420291 17420314 -5002513 + AT_rich Low_complexity Low_complexity 1 23 0 1 717 189 121 0 0 chrX 17420626 17420659 -5002168 + (TTTTTG)n Simple_repeat Simple_repeat 1 33 0 1 717 25 0 0 0 chrX 17422832 17422857 -4999970 + AT_rich Low_complexity Low_complexity 1 25 0 1 717 388 91 30 0 chrX 17423382 17423448 -4999379 + (CAG)n Simple_repeat Simple_repeat 1 68 0 1 717 366 115 0 0 chrX 17423717 17423778 -4999049 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 717 37 23 0 0 chrX 17423945 17423989 -4998838 + AT_rich Low_complexity Low_complexity 1 44 0 1 717 213 235 0 0 chrX 17424499 17424550 -4998277 + T-rich Low_complexity Low_complexity 1 51 0 1 717 21 0 0 0 chrX 17425677 17425698 -4997129 + AT_rich Low_complexity Low_complexity 1 21 0 1 717 21 36 0 0 chrX 17426647 17426675 -4996152 + AT_rich Low_complexity Low_complexity 1 28 0 1 717 306 227 0 11 chrX 17428395 17428484 -4994343 - ROO_I LTR Pao -7534 722 635 1 717 180 0 0 0 chrX 17428499 17428519 -4994308 + (CTG)n Simple_repeat Simple_repeat 1 20 0 1 717 22 35 0 0 chrX 17428855 17428884 -4993943 + AT_rich Low_complexity Low_complexity 1 29 0 1 717 360 43 0 0 chrX 17429938 17429984 -4992843 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 717 189 195 0 0 chrX 17430558 17430599 -4992228 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 717 24 53 0 0 chrX 17431402 17431440 -4991387 + AT_rich Low_complexity Low_complexity 1 38 0 1 717 23 0 0 0 chrX 17431489 17431512 -4991315 + AT_rich Low_complexity Low_complexity 1 23 0 1 717 217 222 19 0 chrX 17431702 17431756 -4991071 + (CAG)n Simple_repeat Simple_repeat 3 57 0 1 718 22 56 0 0 chrX 17432762 17432798 -4990029 + AT_rich Low_complexity Low_complexity 1 36 0 1 718 21 0 0 0 chrX 17433394 17433415 -4989412 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 34 84 0 0 chrX 17434610 17434693 -4988134 + AT_rich Low_complexity Low_complexity 1 83 0 1 718 22 0 0 0 chrX 17435161 17435183 -4987644 + AT_rich Low_complexity Low_complexity 1 22 0 1 718 25 31 0 0 chrX 17438079 17438111 -4984716 + AT_rich Low_complexity Low_complexity 1 32 0 1 718 21 0 0 0 chrX 17439708 17439729 -4983098 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 180 135 0 0 chrX 17440308 17440345 -4982482 + (T)n Simple_repeat Simple_repeat 1 37 0 1 718 180 77 0 0 chrX 17440594 17440620 -4982207 + (CTG)n Simple_repeat Simple_repeat 2 27 0 1 718 21 36 0 0 chrX 17440976 17441004 -4981823 + AT_rich Low_complexity Low_complexity 1 28 0 1 718 34 0 0 0 chrX 17444118 17444152 -4978675 + AT_rich Low_complexity Low_complexity 1 34 0 1 718 204 214 0 0 chrX 17444906 17444962 -4977865 + (TCTCTG)n Simple_repeat Simple_repeat 5 60 0 1 718 33 25 0 0 chrX 17445192 17445232 -4977595 + AT_rich Low_complexity Low_complexity 1 40 0 1 718 26 0 0 0 chrX 17447032 17447058 -4975769 + AT_rich Low_complexity Low_complexity 1 26 0 1 718 21 0 0 0 chrX 17447942 17447963 -4974864 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 808 66 75 0 chrX 17448533 17448639 -4974188 + DNAREP1_DM LINE Penelope 2 115 -479 1 718 1320 86 162 9 chrX 17448624 17448846 -4973981 + DNAREP1_DM LINE Penelope 339 594 0 1 718 31 0 0 0 chrX 17449012 17449043 -4973784 + AT_rich Low_complexity Low_complexity 1 31 0 1 718 36 0 0 0 chrX 17450356 17450392 -4972435 + AT_rich Low_complexity Low_complexity 1 36 0 1 718 25 0 0 0 chrX 17450511 17450536 -4972291 + AT_rich Low_complexity Low_complexity 1 25 0 1 718 423 100 0 0 chrX 17451046 17451116 -4971711 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 718 3162 20 0 0 chrX 17451116 17451472 -4971355 + MDG1_LTR LTR Gypsy 87 442 0 1 718 202 237 17 17 chrX 17454022 17454082 -4968745 + (CAAA)n Simple_repeat Simple_repeat 3 62 0 1 718 25 51 0 0 chrX 17456767 17456806 -4966021 + AT_rich Low_complexity Low_complexity 1 39 0 1 718 23 0 0 0 chrX 17459002 17459025 -4963802 + AT_rich Low_complexity Low_complexity 1 23 0 1 718 27 0 0 0 chrX 17459191 17459218 -4963609 + AT_rich Low_complexity Low_complexity 1 27 0 1 718 23 54 0 0 chrX 17460714 17460751 -4962076 + AT_rich Low_complexity Low_complexity 1 37 0 1 718 255 272 22 0 chrX 17463782 17463874 -4958953 + (GCTG)n Simple_repeat Simple_repeat 1 94 0 1 718 217 173 19 0 chrX 17464062 17464114 -4958713 + T-rich Low_complexity Low_complexity 2 54 0 1 718 267 93 0 0 chrX 17469558 17469601 -4953226 + (CTG)n Simple_repeat Simple_repeat 1 43 0 1 718 214 167 0 0 chrX 17470669 17470705 -4952122 + A-rich Low_complexity Low_complexity 3 38 0 1 718 29 0 0 0 chrX 17471429 17471458 -4951369 + AT_rich Low_complexity Low_complexity 1 29 0 1 718 21 0 0 0 chrX 17475563 17475584 -4947243 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 24 53 0 0 chrX 17476146 17476184 -4946643 + AT_rich Low_complexity Low_complexity 1 38 0 1 718 25 83 0 0 chrX 17478293 17478353 -4944474 + AT_rich Low_complexity Low_complexity 1 60 0 1 718 21 0 0 0 chrX 17480682 17480703 -4942124 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 183 80 0 0 chrX 17481242 17481267 -4941560 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1 718 22 0 0 0 chrX 17482576 17482598 -4940229 + AT_rich Low_complexity Low_complexity 1 22 0 1 718 226 114 0 43 chrX 17483564 17483610 -4939217 + (CATA)n Simple_repeat Simple_repeat 3 46 0 1 718 21 0 0 0 chrX 17483684 17483705 -4939122 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 198 0 0 0 chrX 17483825 17483847 -4938980 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 718 26 64 0 0 chrX 17486708 17486755 -4936072 + AT_rich Low_complexity Low_complexity 1 47 0 1 718 213 39 0 0 chrX 17487352 17487378 -4935449 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 718 21 0 0 0 chrX 17488320 17488341 -4934486 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 342 80 0 0 chrX 17489170 17489220 -4933607 + (CATAC)n Simple_repeat Simple_repeat 1 50 0 1 718 30 27 0 0 chrX 17489918 17489955 -4932872 + AT_rich Low_complexity Low_complexity 1 37 0 1 718 189 94 0 0 chrX 17491112 17491144 -4931683 + (GGA)n Simple_repeat Simple_repeat 3 34 0 1 718 216 143 0 0 chrX 17494823 17494865 -4927962 + (CAG)n Simple_repeat Simple_repeat 3 44 0 1 718 279 130 0 0 chrX 17495013 17495067 -4927760 + (CAG)n Simple_repeat Simple_repeat 1 54 0 1 718 192 77 0 0 chrX 17500412 17500438 -4922389 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 718 210 37 0 0 chrX 17500605 17500632 -4922195 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 718 25 0 0 0 chrX 17501854 17501879 -4920948 + AT_rich Low_complexity Low_complexity 1 25 0 1 718 21 0 0 0 chrX 17501982 17502003 -4920824 + AT_rich Low_complexity Low_complexity 1 21 0 1 718 255 125 0 0 chrX 17508470 17508510 -4914317 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 718 345 145 0 0 chrX 17508785 17508847 -4913980 + (CAT)n Simple_repeat Simple_repeat 3 64 0 1 718 210 171 0 0 chrX 17509767 17509808 -4913019 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 718 25 0 0 0 chrX 17511963 17511988 -4910839 + AT_rich Low_complexity Low_complexity 1 25 0 1 718 23 54 0 0 chrX 17512020 17512057 -4910770 + AT_rich Low_complexity Low_complexity 1 37 0 1 718 250 254 0 0 chrX 17512340 17512407 -4910420 + T-rich Low_complexity Low_complexity 1 67 0 1 718 23 33 0 0 chrX 17514751 17514781 -4908046 + AT_rich Low_complexity Low_complexity 1 30 0 1 718 23 33 0 0 chrX 17515206 17515236 -4907591 + AT_rich Low_complexity Low_complexity 1 30 0 1 718 320 51 889 0 chrX 17516097 17516170 -4906657 - DNAREP1_DM LINE Penelope 0 594 457 1 718 940 97 146 12 chrX 17516175 17516373 -4906454 - DNAREP1_DM LINE Penelope -237 357 1 1 718 333 186 0 0 chrX 17516438 17516497 -4906330 + DNAREP1_DM LINE Penelope 1 59 -535 1 718 180 0 0 0 chrX 17519794 17519814 -4903013 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 718 192 152 0 0 chrX 17521109 17521142 -4901685 + (CTG)n Simple_repeat Simple_repeat 1 33 0 1 718 24 0 0 0 chrX 17522024 17522048 -4900779 + AT_rich Low_complexity Low_complexity 1 24 0 1 718 28 61 0 0 chrX 17523621 17523670 -4899157 + AT_rich Low_complexity Low_complexity 1 49 0 1 718 22 56 0 0 chrX 17523706 17523742 -4899085 + AT_rich Low_complexity Low_complexity 1 36 0 1 718 28 0 0 0 chrX 17530129 17530157 -4892670 + AT_rich Low_complexity Low_complexity 1 28 0 1 718 189 107 0 0 chrX 17532831 17532859 -4889968 + (CGA)n Simple_repeat Simple_repeat 2 29 0 1 718 182 108 0 51 chrX 17533577 17533616 -4889211 + T-rich Low_complexity Low_complexity 3 39 0 1 718 198 71 0 0 chrX 17533810 17533838 -4888989 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 718 294 29 0 0 chrX 17534152 17534187 -4888640 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 718 209 170 0 36 chrX 17534327 17534382 -4888445 + T-rich Low_complexity Low_complexity 2 54 0 1 718 207 293 0 0 chrX 17534606 17534664 -4888163 + C-rich Low_complexity Low_complexity 5 62 0 1 718 23 0 0 0 chrX 17534691 17534714 -4888113 + AT_rich Low_complexity Low_complexity 1 23 0 1 718 256 227 13 13 chrX 17534899 17534975 -4887852 + T-rich Low_complexity Low_complexity 6 81 0 1 718 198 0 0 0 chrX 17535045 17535067 -4887760 + (GGA)n Simple_repeat Simple_repeat 1 22 0 1 718 27 29 0 0 chrX 17535218 17535252 -4887575 + AT_rich Low_complexity Low_complexity 1 34 0 1 718 186 103 0 0 chrX 17536552 17536581 -4886246 + (TTCTCC)n Simple_repeat Simple_repeat 6 34 0 1 718 201 94 0 0 chrX 17537880 17537912 -4884915 + (CCCGAA)n Simple_repeat Simple_repeat 1 32 0 1 718 226 152 0 33 chrX 17540299 17540360 -4882467 + (TGAA)n Simple_repeat Simple_repeat 3 61 0 1 718 200 35 35 0 chrX 17540392 17540421 -4882406 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 718 190 0 0 62 chrX 17545735 17545767 -4877060 + (CAA)n Simple_repeat Simple_repeat 3 32 0 1 718 200 114 0 28 chrX 17546328 17546364 -4876463 + (GGGAGA)n Simple_repeat Simple_repeat 4 38 0 1 718 28 0 0 0 chrX 17550893 17550921 -4871906 + AT_rich Low_complexity Low_complexity 1 28 0 1 718 29 0 0 0 chrX 17551173 17551202 -4871625 + AT_rich Low_complexity Low_complexity 1 29 0 1 718 22 35 0 0 chrX 17551272 17551301 -4871526 + AT_rich Low_complexity Low_complexity 1 29 0 1 718 25 0 0 0 chrX 17552036 17552061 -4870766 + AT_rich Low_complexity Low_complexity 1 25 0 1 718 203 254 17 0 chrX 17552611 17552670 -4870157 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 718 229 225 12 48 chrX 17553122 17553206 -4869621 + CT-rich Low_complexity Low_complexity 1 81 0 1 718 207 114 0 0 chrX 17554797 17554832 -4867995 + (T)n Simple_repeat Simple_repeat 1 35 0 1 718 26 30 0 0 chrX 17563093 17563126 -4859701 + AT_rich Low_complexity Low_complexity 1 33 0 1 719 232 239 0 0 chrX 17567242 17567309 -4855518 + (TGG)n Simple_repeat Simple_repeat 1 67 0 1 719 226 208 0 0 chrX 17568496 17568544 -4854283 + CT-rich Low_complexity Low_complexity 6 53 0 1 719 24 32 0 0 chrX 17568976 17569007 -4853820 + AT_rich Low_complexity Low_complexity 1 31 0 1 719 27 81 0 0 chrX 17569102 17569164 -4853663 + AT_rich Low_complexity Low_complexity 1 62 0 1 719 264 189 0 0 chrX 17570208 17570282 -4852545 + CT-rich Low_complexity Low_complexity 3 76 0 1 719 23 54 0 0 chrX 17570747 17570784 -4852043 + AT_rich Low_complexity Low_complexity 1 37 0 1 719 21 36 0 0 chrX 17571540 17571568 -4851259 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 233 217 0 0 chrX 17572497 17572557 -4850270 + T-rich Low_complexity Low_complexity 1 60 0 1 719 21 0 0 0 chrX 17573941 17573962 -4848865 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 234 179 0 0 chrX 17574274 17574330 -4848497 + (CGGAG)n Simple_repeat Simple_repeat 1 56 0 1 719 270 56 0 0 chrX 17575605 17575641 -4847186 + (CAG)n Simple_repeat Simple_repeat 2 37 0 1 719 23 0 0 0 chrX 17576145 17576168 -4846659 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 185 196 0 18 chrX 17576490 17576547 -4846280 + CT-rich Low_complexity Low_complexity 3 58 0 1 719 183 42 0 0 chrX 17576670 17576694 -4846133 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 719 243 276 0 0 chrX 17576989 17577047 -4845780 + (CGG)n Simple_repeat Simple_repeat 3 60 0 1 719 25 0 0 0 chrX 17577263 17577288 -4845539 + AT_rich Low_complexity Low_complexity 1 25 0 1 719 40 49 0 0 chrX 17578861 17578922 -4843905 + AT_rich Low_complexity Low_complexity 1 61 0 1 719 300 111 0 0 chrX 17580583 17580628 -4842199 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 719 198 171 0 0 chrX 17580786 17580827 -4842000 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1 719 39 0 0 0 chrX 17581486 17581525 -4841302 + AT_rich Low_complexity Low_complexity 1 39 0 1 719 192 40 0 0 chrX 17583394 17583419 -4839408 + (TGG)n Simple_repeat Simple_repeat 3 27 0 1 719 216 149 0 0 chrX 17583847 17583894 -4838933 + (TGG)n Simple_repeat Simple_repeat 1 47 0 1 719 21 0 0 0 chrX 17584525 17584546 -4838281 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 282 164 0 0 chrX 17586665 17586720 -4836107 + (CAA)n Simple_repeat Simple_repeat 3 57 0 1 719 207 0 0 0 chrX 17587456 17587479 -4835348 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 719 219 231 14 21 chrX 17588408 17588507 -4834320 + A-rich Low_complexity Low_complexity 1 98 0 1 719 49 52 0 0 chrX 17589140 17589217 -4833610 + AT_rich Low_complexity Low_complexity 1 77 0 1 719 27 29 0 0 chrX 17589706 17589740 -4833087 + AT_rich Low_complexity Low_complexity 1 34 0 1 719 188 86 0 28 chrX 17590645 17590681 -4832146 + (CAAAAA)n Simple_repeat Simple_repeat 4 38 0 1 719 23 0 0 0 chrX 17590831 17590854 -4831973 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 243 88 0 0 chrX 17592462 17592496 -4830331 + (CGAAT)n Simple_repeat Simple_repeat 4 37 0 1 719 23 0 0 0 chrX 17596880 17596903 -4825924 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 22 35 0 0 chrX 17597431 17597460 -4825367 + AT_rich Low_complexity Low_complexity 1 29 0 1 719 22 0 0 0 chrX 17600204 17600226 -4822601 + AT_rich Low_complexity Low_complexity 1 22 0 1 719 240 122 0 0 chrX 17601911 17601952 -4820875 + (TCC)n Simple_repeat Simple_repeat 2 42 0 1 719 222 239 0 29 chrX 17603106 17603175 -4819652 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 719 21 36 0 0 chrX 17604258 17604286 -4818541 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 189 154 0 0 chrX 17604839 17604878 -4817949 + (CAA)n Simple_repeat Simple_repeat 1 39 0 1 719 240 143 0 0 chrX 17607233 17607275 -4815552 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 719 22 0 0 0 chrX 17607777 17607799 -4815028 + AT_rich Low_complexity Low_complexity 1 22 0 1 719 180 0 0 0 chrX 17609270 17609290 -4813537 + (CAA)n Simple_repeat Simple_repeat 1 20 0 1 719 330 87 0 0 chrX 17610658 17610704 -4812123 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 719 22 56 0 0 chrX 17610991 17611027 -4811800 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 210 244 0 0 chrX 17612475 17612520 -4810307 + (CATA)n Simple_repeat Simple_repeat 1 45 0 1 719 207 327 0 0 chrX 17613066 17613176 -4809651 + A-rich Low_complexity Low_complexity 1 110 0 1 719 201 39 0 0 chrX 17614014 17614040 -4808787 + (TTC)n Simple_repeat Simple_repeat 1 26 0 1 719 266 296 12 0 chrX 17616953 17617034 -4805793 + CT-rich Low_complexity Low_complexity 3 84 0 1 719 294 206 0 0 chrX 17617134 17617207 -4805620 + (TTTCG)n Simple_repeat Simple_repeat 5 77 0 1 719 26 0 0 0 chrX 17617403 17617429 -4805398 + AT_rich Low_complexity Low_complexity 1 26 0 1 719 231 294 0 0 chrX 17617544 17617646 -4805181 + A-rich Low_complexity Low_complexity 1 102 0 1 719 30 0 0 0 chrX 17618068 17618098 -4804729 + AT_rich Low_complexity Low_complexity 1 30 0 1 719 252 0 0 0 chrX 17618172 17618200 -4804627 + (T)n Simple_repeat Simple_repeat 1 28 0 1 719 34 24 0 0 chrX 17618778 17618819 -4804008 + AT_rich Low_complexity Low_complexity 1 41 0 1 719 252 59 0 0 chrX 17619206 17619240 -4803587 + (TATAG)n Simple_repeat Simple_repeat 3 36 0 1 719 202 229 16 32 chrX 17620154 17620217 -4802610 + T-rich Low_complexity Low_complexity 4 65 0 1 719 243 152 0 0 chrX 17620519 17620565 -4802262 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 719 212 156 44 0 chrX 17621090 17621135 -4801692 + T-rich Low_complexity Low_complexity 5 51 0 1 719 23 92 0 0 chrX 17622740 17622805 -4800022 + AT_rich Low_complexity Low_complexity 1 65 0 1 719 212 59 0 29 chrX 17625502 17625537 -4797290 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 1 719 223 170 0 0 chrX 17626245 17626292 -4796535 + A-rich Low_complexity Low_complexity 1 47 0 1 719 228 122 0 0 chrX 17627547 17627588 -4795239 + (T)n Simple_repeat Simple_repeat 1 41 0 1 719 231 103 0 0 chrX 17627935 17627974 -4794853 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 719 219 157 0 56 chrX 17628054 17628108 -4794719 + (CATTT)n Simple_repeat Simple_repeat 1 51 0 1 719 24 0 0 0 chrX 17628324 17628348 -4794479 + AT_rich Low_complexity Low_complexity 1 24 0 1 719 189 74 0 0 chrX 17629604 17629631 -4793196 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 1 719 180 111 0 0 chrX 17629909 17629936 -4792891 + (CATA)n Simple_repeat Simple_repeat 4 30 0 1 719 252 100 0 0 chrX 17630350 17630390 -4792437 + (TGAG)n Simple_repeat Simple_repeat 4 43 0 1 719 37 86 0 0 chrX 17631911 17632004 -4790823 + AT_rich Low_complexity Low_complexity 1 93 0 1 719 198 0 0 0 chrX 17632697 17632719 -4790108 + (CAA)n Simple_repeat Simple_repeat 1 22 0 1 719 243 0 0 0 chrX 17633148 17633175 -4789652 + (CAG)n Simple_repeat Simple_repeat 2 28 0 1 719 205 184 0 0 chrX 17633211 17633249 -4789578 + CT-rich Low_complexity Low_complexity 2 39 0 1 719 204 261 0 0 chrX 17634206 17634252 -4788575 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1 719 216 254 0 0 chrX 17634368 17634427 -4788400 + GA-rich Low_complexity Low_complexity 2 60 0 1 719 215 250 0 18 chrX 17636029 17636086 -4786741 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 1 719 24 77 0 0 chrX 17638755 17638807 -4784020 + AT_rich Low_complexity Low_complexity 1 52 0 1 719 21 0 0 0 chrX 17640736 17640757 -4782070 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 450 101 0 0 chrX 17642867 17642936 -4779891 + (CAG)n Simple_repeat Simple_repeat 3 71 0 1 719 207 100 0 0 chrX 17643912 17643942 -4778885 + (CAG)n Simple_repeat Simple_repeat 1 30 0 1 719 180 0 0 0 chrX 17645231 17645251 -4777576 + (CAG)n Simple_repeat Simple_repeat 1 20 0 1 719 21 36 0 0 chrX 17645458 17645486 -4777341 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 27 49 0 0 chrX 17646067 17646108 -4776719 + AT_rich Low_complexity Low_complexity 1 41 0 1 719 23 0 0 0 chrX 17647447 17647470 -4775357 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 21 0 0 0 chrX 17648419 17648440 -4774387 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 32 57 0 0 chrX 17653087 17653140 -4769687 + AT_rich Low_complexity Low_complexity 1 53 0 1 719 23 0 0 0 chrX 17653941 17653964 -4768863 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 40 59 0 0 chrX 17656383 17656451 -4766376 + AT_rich Low_complexity Low_complexity 1 68 0 1 719 36 23 0 0 chrX 17656566 17656609 -4766218 + AT_rich Low_complexity Low_complexity 1 43 0 1 719 180 200 0 0 chrX 17662628 17662673 -4760154 + (CTCG)n Simple_repeat Simple_repeat 2 46 0 1 719 192 125 0 0 chrX 17663035 17663067 -4759760 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 719 201 143 0 0 chrX 17666592 17666627 -4756200 + (TGG)n Simple_repeat Simple_repeat 2 36 0 1 719 183 80 0 0 chrX 17666840 17666865 -4755962 + (CATA)n Simple_repeat Simple_repeat 4 28 0 1 719 192 40 0 0 chrX 17666959 17666984 -4755843 + (ACTG)n Simple_repeat Simple_repeat 4 28 0 1 719 276 308 0 28 chrX 17671290 17671397 -4751430 + (CGG)n Simple_repeat Simple_repeat 2 105 0 1 719 35 0 0 0 chrX 17672063 17672098 -4750729 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 200 122 0 24 chrX 17672281 17672323 -4750504 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 719 210 191 0 0 chrX 17675050 17675092 -4747735 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 1 719 24 0 0 0 chrX 17677307 17677331 -4745496 + AT_rich Low_complexity Low_complexity 1 24 0 1 719 213 108 0 0 chrX 17677752 17677789 -4745038 + (AAATG)n Simple_repeat Simple_repeat 1 37 0 1 719 206 192 0 19 chrX 17677973 17678026 -4744801 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 719 27 0 0 0 chrX 17678512 17678539 -4744288 + AT_rich Low_complexity Low_complexity 1 27 0 1 719 231 125 0 0 chrX 17679021 17679061 -4743766 + (TCC)n Simple_repeat Simple_repeat 1 40 0 1 719 21 0 0 0 chrX 17679320 17679341 -4743486 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 201 108 0 108 chrX 17679438 17679531 -4743296 + (CCCTAA)n Simple_repeat Simple_repeat 4 86 0 1 719 24 96 0 0 chrX 17680942 17681015 -4741812 + AT_rich Low_complexity Low_complexity 1 73 0 1 719 24 32 0 0 chrX 17681098 17681129 -4741698 + AT_rich Low_complexity Low_complexity 1 31 0 1 719 213 94 0 0 chrX 17681695 17681727 -4741100 + (T)n Simple_repeat Simple_repeat 1 32 0 1 719 22 56 0 0 chrX 17682286 17682322 -4740505 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 204 242 15 15 chrX 17683773 17683840 -4738987 + CT-rich Low_complexity Low_complexity 1 67 0 1 719 207 0 0 0 chrX 17684081 17684104 -4738723 + (TTC)n Simple_repeat Simple_repeat 1 23 0 1 719 186 222 0 0 chrX 17684273 17684327 -4738500 + (TTG)n Simple_repeat Simple_repeat 1 54 0 1 719 218 163 0 44 chrX 17685344 17685389 -4737438 + (CAG)n Simple_repeat Simple_repeat 2 44 0 1 719 309 51 0 0 chrX 17685743 17685782 -4737045 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 719 23 0 0 0 chrX 17686577 17686600 -4736227 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 2287 18 7 11 chrX 17687038 17687314 -4735513 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 719 16355 2 1 0 chrX 17687314 17689091 -4733736 + BLASTOPIA_I LTR Gypsy 1 1778 -2703 1 719 3740 2 0 0 chrX 17689594 17690003 -4732824 + BLASTOPIA_I LTR Gypsy 4073 4481 0 1 719 2287 18 7 11 chrX 17690003 17690279 -4732548 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 719 36 0 0 0 chrX 17691122 17691158 -4731669 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 216 171 0 0 chrX 17691351 17691392 -4731435 + G-rich Low_complexity Low_complexity 4 44 0 1 719 21 0 0 0 chrX 17692379 17692400 -4730427 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 228 149 0 0 chrX 17693651 17693698 -4729129 + (CATTC)n Simple_repeat Simple_repeat 5 51 0 1 719 189 0 0 0 chrX 17693711 17693732 -4729095 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 719 235 231 0 0 chrX 17694342 17694394 -4728433 + CT-rich Low_complexity Low_complexity 2 53 0 1 719 269 208 0 14 chrX 17694461 17694534 -4728293 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 720 21 0 0 0 chrX 17695829 17695850 -4726977 + AT_rich Low_complexity Low_complexity 1 21 0 1 720 297 155 0 0 chrX 17697228 17697286 -4725541 + (TTG)n Simple_repeat Simple_repeat 2 59 0 1 720 201 133 0 0 chrX 17698657 17698687 -4724140 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 720 273 57 0 0 chrX 17698930 17698965 -4723862 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 720 249 266 0 0 chrX 17700539 17700618 -4722209 + A-rich Low_complexity Low_complexity 1 79 0 1 720 205 179 0 0 chrX 17701538 17701577 -4721250 + (CCGAA)n Simple_repeat Simple_repeat 4 42 0 1 720 201 39 0 0 chrX 17702582 17702608 -4720219 + (T)n Simple_repeat Simple_repeat 1 26 0 1 720 216 97 0 0 chrX 17703046 17703077 -4719750 + (CAT)n Simple_repeat Simple_repeat 1 31 0 1 720 222 37 0 0 chrX 17703963 17703990 -4718837 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 720 258 81 0 0 chrX 17704886 17704923 -4717904 + (GTATG)n Simple_repeat Simple_repeat 4 40 0 1 720 29 78 0 0 chrX 17705635 17705699 -4717128 + AT_rich Low_complexity Low_complexity 1 64 0 1 720 441 76 0 0 chrX 17706434 17706500 -4716327 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 720 228 111 0 0 chrX 17706654 17706690 -4716137 + (CATA)n Simple_repeat Simple_repeat 1 36 0 1 720 273 128 0 0 chrX 17707035 17707082 -4715745 + (CAT)n Simple_repeat Simple_repeat 1 47 0 1 720 22 0 0 0 chrX 17708194 17708216 -4714611 + AT_rich Low_complexity Low_complexity 1 22 0 1 720 227 186 0 0 chrX 17710706 17710749 -4712078 - DNAREP1_DM LINE Penelope -551 43 1 1 720 21 0 0 0 chrX 17712147 17712168 -4710659 + GC_rich Low_complexity Low_complexity 1 21 0 1 720 21 0 0 0 chrX 17712525 17712546 -4710281 + AT_rich Low_complexity Low_complexity 1 21 0 1 720 209 196 0 0 chrX 17712600 17712651 -4710176 + CT-rich Low_complexity Low_complexity 3 53 0 1 720 25 0 0 0 chrX 17712835 17712860 -4709967 + AT_rich Low_complexity Low_complexity 1 25 0 1 720 22 0 0 0 chrX 17714808 17714830 -4707997 + AT_rich Low_complexity Low_complexity 1 22 0 1 720 222 61 20 39 chrX 17715020 17715071 -4707756 + (GATTG)n Simple_repeat Simple_repeat 4 53 0 1 720 234 224 0 0 chrX 17715663 17715748 -4707079 + (TCTCTG)n Simple_repeat Simple_repeat 4 88 0 1 720 218 29 0 56 chrX 17716029 17716065 -4706762 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1 720 183 227 0 0 chrX 17716106 17716172 -4706655 + T-rich Low_complexity Low_complexity 1 66 0 1 720 193 91 22 43 chrX 17716203 17716249 -4706578 + (TTTG)n Simple_repeat Simple_repeat 3 47 0 1 720 231 36 0 0 chrX 17717819 17717847 -4704980 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1 720 283 304 0 0 chrX 17717894 17717963 -4704864 + (CCG)n Simple_repeat Simple_repeat 2 70 0 1 720 242 196 0 0 chrX 17718343 17718394 -4704433 + (CTG)n Simple_repeat Simple_repeat 2 52 0 1 720 213 94 0 0 chrX 17721146 17721178 -4701649 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 720 293 233 14 0 chrX 17721233 17721306 -4701521 + (CA)n Simple_repeat Simple_repeat 2 75 0 1 720 21 0 0 0 chrX 17725060 17725081 -4697746 + AT_rich Low_complexity Low_complexity 1 21 0 1 720 26 30 0 0 chrX 17725980 17726013 -4696814 + AT_rich Low_complexity Low_complexity 1 33 0 1 720 226 233 16 16 chrX 17726347 17726408 -4696419 + GA-rich Low_complexity Low_complexity 1 61 0 1 720 183 100 0 0 chrX 17727380 17727410 -4695417 + (TCC)n Simple_repeat Simple_repeat 1 30 0 1 720 225 108 0 0 chrX 17728253 17728290 -4694537 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 720 34 24 0 0 chrX 17730039 17730080 -4692747 + AT_rich Low_complexity Low_complexity 1 41 0 1 720 252 186 0 0 chrX 17732427 17732486 -4690341 + (TGGA)n Simple_repeat Simple_repeat 2 60 0 1 720 189 0 0 0 chrX 17737102 17737123 -4685704 + (GGA)n Simple_repeat Simple_repeat 1 21 0 1 720 21 82 0 0 chrX 17738842 17738891 -4683936 + AT_rich Low_complexity Low_complexity 1 49 0 1 720 283 247 14 0 chrX 17742243 17742316 -4680511 + (CATA)n Simple_repeat Simple_repeat 1 74 0 1 720 24 32 0 0 chrX 17746657 17746688 -4676139 + AT_rich Low_complexity Low_complexity 1 31 0 1 720 21 0 0 0 chrX 17749711 17749732 -4673095 + AT_rich Low_complexity Low_complexity 1 21 0 1 720 200 35 35 0 chrX 17750495 17750524 -4672303 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 1 720 26 64 0 0 chrX 17756782 17756829 -4665998 + AT_rich Low_complexity Low_complexity 1 47 0 1 720 204 200 0 0 chrX 17758109 17758149 -4664678 + (CCG)n Simple_repeat Simple_repeat 1 40 0 1 720 234 91 0 0 chrX 17758386 17758419 -4664408 + (TTG)n Simple_repeat Simple_repeat 3 35 0 1 720 22 56 0 0 chrX 17759572 17759608 -4663219 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 588 112 212 22 chrX 17760605 17760742 -4662085 + DNAREP1_DM LINE Penelope 1 163 -431 1 720 283 232 58 0 chrX 17760756 17760825 -4662002 + DNAREP1_DM LINE Penelope 425 497 -97 1 720 24 32 0 0 chrX 17760875 17760906 -4661921 + AT_rich Low_complexity Low_complexity 1 31 0 1 720 209 139 23 0 chrX 17761529 17761572 -4661255 + (TATG)n Simple_repeat Simple_repeat 1 44 0 1 720 218 363 7 0 chrX 17763155 17763301 -4659526 + (CCG)n Simple_repeat Simple_repeat 1 147 0 1 720 38 68 0 0 chrX 17764701 17764774 -4658053 + AT_rich Low_complexity Low_complexity 1 73 0 1 720 21 0 0 0 chrX 17766010 17766031 -4656796 + AT_rich Low_complexity Low_complexity 1 21 0 1 720 188 170 0 19 chrX 17768768 17768822 -4654005 + (CTG)n Simple_repeat Simple_repeat 3 55 0 1 720 261 57 0 0 chrX 17769857 17769892 -4652935 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 720 198 0 0 0 chrX 17771404 17771426 -4651401 + (T)n Simple_repeat Simple_repeat 1 22 0 1 720 213 254 0 16 chrX 17771583 17771647 -4651180 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 720 30 0 0 0 chrX 17771725 17771755 -4651072 + AT_rich Low_complexity Low_complexity 1 30 0 1 720 200 219 0 0 chrX 17772193 17772234 -4650593 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 720 22 0 0 0 chrX 17772686 17772708 -4650119 + AT_rich Low_complexity Low_complexity 1 22 0 1 720 213 238 16 16 chrX 17772921 17772985 -4649842 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 720 23 0 0 0 chrX 17773492 17773515 -4649312 + AT_rich Low_complexity Low_complexity 1 23 0 1 720 246 209 34 34 chrX 17775694 17775783 -4647044 + T-rich Low_complexity Low_complexity 4 92 0 1 720 192 158 0 0 chrX 17775832 17775870 -4646957 + (AAGTG)n Simple_repeat Simple_repeat 5 42 0 1 720 264 77 0 0 chrX 17775907 17775946 -4646881 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 720 254 95 0 23 chrX 17776650 17776693 -4646134 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 720 284 219 12 0 chrX 17777221 17777303 -4645524 + (CTAG)n Simple_repeat Simple_repeat 4 86 0 1 720 235 388 0 0 chrX 17778041 17778162 -4644665 + (CAGAGA)n Simple_repeat Simple_repeat 2 122 0 1 720 234 220 0 17 chrX 17780527 17780587 -4642240 - ROO_I LTR Pao -7539 717 659 1 720 183 129 0 0 chrX 17780687 17780718 -4642109 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 720 242 212 73 24 chrX 17780756 17780838 -4641989 - ROO_I LTR Pao -7487 769 684 1 720 206 171 24 0 chrX 17780997 17781038 -4641789 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 720 22 0 0 0 chrX 17781127 17781149 -4641678 + AT_rich Low_complexity Low_complexity 1 22 0 1 720 25 0 0 0 chrX 17786321 17786346 -4636481 + AT_rich Low_complexity Low_complexity 1 25 0 1 720 192 77 0 0 chrX 17787659 17787685 -4635142 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 720 3580 7 7 7 chrX 17787685 17788098 -4634729 - DM297_LTR LTR Gypsy -1 413 1 1 720 16320 8 1 0 chrX 17788098 17789989 -4632838 - DM297_I LTR Gypsy 0 6167 4276 1 720 3588 7 7 7 chrX 17789999 17790413 -4632414 - DM297_LTR LTR Gypsy 0 414 1 1 720 23 0 0 0 chrX 17790727 17790750 -4632077 + AT_rich Low_complexity Low_complexity 1 23 0 1 720 197 119 24 0 chrX 17791282 17791324 -4631503 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 720 25 0 0 0 chrX 17796476 17796501 -4626326 + AT_rich Low_complexity Low_complexity 1 25 0 1 720 300 137 0 0 chrX 17797814 17797865 -4624962 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 720 23 0 0 0 chrX 17798147 17798170 -4624657 + AT_rich Low_complexity Low_complexity 1 23 0 1 720 197 119 24 0 chrX 17798704 17798746 -4624081 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 720 29 0 0 0 chrX 17801094 17801123 -4621704 + AT_rich Low_complexity Low_complexity 1 29 0 1 720 29 0 0 0 chrX 17804310 17804339 -4618488 + AT_rich Low_complexity Low_complexity 1 29 0 1 720 33 0 0 0 chrX 17805155 17805188 -4617639 + AT_rich Low_complexity Low_complexity 1 33 0 1 720 26 50 0 0 chrX 17805954 17805994 -4616833 + AT_rich Low_complexity Low_complexity 1 40 0 1 720 31 44 0 0 chrX 17806124 17806169 -4616658 + AT_rich Low_complexity Low_complexity 1 45 0 1 720 180 0 0 0 chrX 17806280 17806300 -4616527 + (CTG)n Simple_repeat Simple_repeat 3 22 0 1 720 241 241 0 0 chrX 17806414 17806472 -4616355 + (TTG)n Simple_repeat Simple_repeat 3 60 0 1 720 201 147 0 0 chrX 17810357 17810391 -4612436 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 1 720 30 69 0 0 chrX 17812183 17812241 -4610586 + AT_rich Low_complexity Low_complexity 1 58 0 1 720 22 0 0 0 chrX 17813124 17813146 -4609681 + AT_rich Low_complexity Low_complexity 1 22 0 1 720 21 0 0 0 chrX 17814170 17814191 -4608636 + AT_rich Low_complexity Low_complexity 1 21 0 1 720 22 0 0 0 chrX 17818165 17818187 -4604640 + AT_rich Low_complexity Low_complexity 1 22 0 1 720 234 160 0 0 chrX 17818421 17818471 -4604356 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 720 267 133 0 0 chrX 17818683 17818728 -4604099 + (TTTG)n Simple_repeat Simple_repeat 3 47 0 1 720 274 283 13 39 chrX 17818728 17818910 -4603917 + T-rich Low_complexity Low_complexity 1 177 0 1 720 326 80 20 0 chrX 17818955 17819005 -4603822 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 720 213 39 0 0 chrX 17819511 17819537 -4603290 + (ATTTG)n Simple_repeat Simple_repeat 2 27 0 1 720 23 0 0 0 chrX 17820276 17820299 -4602528 + AT_rich Low_complexity Low_complexity 1 23 0 1 720 209 135 27 0 chrX 17820662 17820699 -4602128 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 720 200 322 0 11 chrX 17820813 17820907 -4601920 + CT-rich Low_complexity Low_complexity 4 96 0 1 720 239 177 0 16 chrX 17821150 17821213 -4601614 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 720 207 0 0 0 chrX 17822046 17822069 -4600758 + (CTAAA)n Simple_repeat Simple_repeat 1 23 0 1 720 252 242 0 101 chrX 17822267 17822465 -4600362 + T-rich Low_complexity Low_complexity 2 179 0 1 720 212 175 16 0 chrX 17822556 17822619 -4600208 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 720 180 0 0 0 chrX 17823038 17823058 -4599769 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 720 193 53 0 73 chrX 17823161 17823202 -4599625 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 1 720 230 141 45 30 chrX 17823261 17823327 -4599500 + T-rich Low_complexity Low_complexity 4 70 0 1 720 37 39 0 0 chrX 17823608 17823659 -4599168 + AT_rich Low_complexity Low_complexity 1 51 0 1 720 273 250 0 0 chrX 17824242 17824326 -4598501 + (CTG)n Simple_repeat Simple_repeat 2 85 0 1 720 225 132 0 0 chrX 17824932 17824970 -4597857 + (ATTCG)n Simple_repeat Simple_repeat 1 38 0 1 721 222 226 16 0 chrX 17825983 17826045 -4596782 + CT-rich Low_complexity Low_complexity 1 63 0 1 721 202 73 0 47 chrX 17826711 17826754 -4596073 + (CTTTG)n Simple_repeat Simple_repeat 3 43 0 1 721 364 212 0 57 chrX 17826973 17827078 -4595749 - ROO_I LTR Pao -7520 736 638 1 721 25 31 0 0 chrX 17827500 17827532 -4595295 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 275 72 0 23 chrX 17827905 17827948 -4594879 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 721 26 0 0 0 chrX 17828403 17828429 -4594398 + AT_rich Low_complexity Low_complexity 1 26 0 1 721 245 235 38 38 chrX 17828471 17828577 -4594250 + T-rich Low_complexity Low_complexity 3 108 0 1 721 204 40 0 0 chrX 17828663 17828688 -4594139 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 721 195 220 0 0 chrX 17828846 17828896 -4593931 + (TTCGG)n Simple_repeat Simple_repeat 4 53 0 1 721 204 200 0 0 chrX 17828896 17828936 -4593891 + (GTGTG)n Simple_repeat Simple_repeat 2 41 0 1 721 188 140 0 39 chrX 17829632 17829684 -4593143 + (AGTAG)n Simple_repeat Simple_repeat 4 53 0 1 721 221 233 0 0 chrX 17830219 17830262 -4592565 + (CGGAA)n Simple_repeat Simple_repeat 2 44 0 1 721 202 132 0 36 chrX 17830561 17830616 -4592211 + (TATATG)n Simple_repeat Simple_repeat 1 53 0 1 721 260 164 29 29 chrX 17830850 17830919 -4591908 + T-rich Low_complexity Low_complexity 4 72 0 1 721 24 0 0 0 chrX 17830989 17831013 -4591814 + AT_rich Low_complexity Low_complexity 1 24 0 1 721 217 280 0 48 chrX 17831487 17831611 -4591216 + T-rich Low_complexity Low_complexity 5 122 0 1 721 221 151 19 0 chrX 17832060 17832113 -4590714 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 721 202 260 0 27 chrX 17832231 17832306 -4590521 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 721 189 65 20 80 chrX 17833809 17833859 -4588968 + (TTTAA)n Simple_repeat Simple_repeat 2 48 0 1 721 222 91 0 0 chrX 17834668 17834701 -4588126 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1 721 337 178 0 32 chrX 17834870 17834963 -4587864 - ROO_I LTR Pao -7532 724 635 1 721 204 40 0 0 chrX 17835281 17835306 -4587521 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 721 214 130 65 0 chrX 17835516 17835562 -4587265 + GA-rich Low_complexity Low_complexity 2 50 0 1 721 23 33 0 0 chrX 17836594 17836624 -4586203 + AT_rich Low_complexity Low_complexity 1 30 0 1 721 339 78 0 0 chrX 17837012 17837063 -4585764 + (CAAT)n Simple_repeat Simple_repeat 3 53 0 1 721 206 145 0 83 chrX 17837284 17837344 -4585483 + T-rich Low_complexity Low_complexity 4 58 0 1 721 277 227 13 0 chrX 17838144 17838219 -4584608 + (TG)n Simple_repeat Simple_repeat 2 77 0 1 721 186 0 0 81 chrX 17839149 17839186 -4583641 + (CGAAA)n Simple_repeat Simple_repeat 4 37 0 1 721 268 230 0 0 chrX 17839426 17839500 -4583327 + T-rich Low_complexity Low_complexity 1 74 0 1 721 183 170 0 0 chrX 17840504 17840551 -4582276 + GA-rich Low_complexity Low_complexity 2 48 0 1 721 270 95 0 0 chrX 17841294 17841336 -4581491 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 721 204 67 0 0 chrX 17841336 17841366 -4581461 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 721 216 135 0 0 chrX 17841810 17841847 -4580980 + (CATAA)n Simple_repeat Simple_repeat 1 37 0 1 721 190 116 23 23 chrX 17844142 17844186 -4578641 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 721 258 200 0 44 chrX 17844856 17844924 -4577903 + GA-rich Low_complexity Low_complexity 2 66 0 1 721 21 36 0 0 chrX 17846210 17846238 -4576589 + AT_rich Low_complexity Low_complexity 1 28 0 1 721 215 204 0 39 chrX 17846377 17846428 -4576399 + (TATG)n Simple_repeat Simple_repeat 3 51 0 1 721 284 219 10 30 chrX 17846562 17846661 -4576166 + T-rich Low_complexity Low_complexity 3 99 0 1 721 249 108 0 0 chrX 17848235 17848272 -4574555 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1 721 232 234 62 0 chrX 17848333 17848397 -4574430 - ROO_I LTR Pao -7518 738 671 1 721 215 229 0 0 chrX 17849542 17849590 -4573237 + (TCTCTG)n Simple_repeat Simple_repeat 6 53 0 1 721 231 133 0 0 chrX 17849749 17849794 -4573033 + (CGAGT)n Simple_repeat Simple_repeat 2 46 0 1 721 348 148 0 0 chrX 17850260 17850321 -4572506 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 721 228 122 0 0 chrX 17851750 17851791 -4571036 + (CGGA)n Simple_repeat Simple_repeat 1 41 0 1 721 198 91 0 0 chrX 17853897 17853930 -4568897 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 721 207 162 0 0 chrX 17854089 17854126 -4568701 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1 721 33 66 0 0 chrX 17854430 17854491 -4568336 + AT_rich Low_complexity Low_complexity 1 61 0 1 721 216 67 0 0 chrX 17854836 17854866 -4567961 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 1 721 180 97 0 0 chrX 17855929 17855960 -4566867 + (CTG)n Simple_repeat Simple_repeat 2 32 0 1 721 201 195 0 0 chrX 17856812 17856853 -4565974 + (CATA)n Simple_repeat Simple_repeat 4 44 0 1 721 267 79 0 0 chrX 17857379 17857417 -4565410 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 721 247 241 0 0 chrX 17857508 17857562 -4565265 + GA-rich Low_complexity Low_complexity 6 59 0 1 721 234 62 0 0 chrX 17857920 17857952 -4564875 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 721 234 0 0 0 chrX 17858122 17858148 -4564679 + (A)n Simple_repeat Simple_repeat 1 26 0 1 721 272 280 0 0 chrX 17858152 17858227 -4564600 + GA-rich Low_complexity Low_complexity 2 76 0 1 721 192 40 0 0 chrX 17858277 17858302 -4564525 + (CAACT)n Simple_repeat Simple_repeat 2 26 0 1 721 222 128 0 0 chrX 17858298 17858337 -4564490 + (CACTT)n Simple_repeat Simple_repeat 2 40 0 1 721 219 242 6 75 chrX 17858491 17858652 -4564175 + (TAAA)n Simple_repeat Simple_repeat 2 151 0 1 721 233 289 0 11 chrX 17858698 17858789 -4564038 + A-rich Low_complexity Low_complexity 3 92 0 1 721 279 0 0 0 chrX 17860076 17860107 -4562720 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 721 228 163 0 0 chrX 17860257 17860300 -4562527 + CT-rich Low_complexity Low_complexity 1 43 0 1 721 26 0 0 0 chrX 17860480 17860506 -4562321 + AT_rich Low_complexity Low_complexity 1 26 0 1 721 21 0 0 0 chrX 17860860 17860881 -4561946 + AT_rich Low_complexity Low_complexity 1 21 0 1 721 216 186 0 0 chrX 17861360 17861403 -4561424 + (CCCA)n Simple_repeat Simple_repeat 2 44 0 1 721 25 51 0 0 chrX 17861757 17861796 -4561031 + AT_rich Low_complexity Low_complexity 1 39 0 1 721 27 0 0 0 chrX 17864128 17864155 -4558672 + AT_rich Low_complexity Low_complexity 1 27 0 1 721 22 56 0 0 chrX 17865660 17865696 -4557131 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 189 74 0 0 chrX 17865869 17865896 -4556931 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 721 195 167 0 0 chrX 17867762 17867804 -4555023 + A-rich Low_complexity Low_complexity 1 42 0 1 721 218 200 20 0 chrX 17867895 17867945 -4554882 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 721 285 98 0 0 chrX 17867945 17867986 -4554841 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 721 198 71 0 0 chrX 17868315 17868343 -4554484 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 721 24 0 0 0 chrX 17870022 17870046 -4552781 + AT_rich Low_complexity Low_complexity 1 24 0 1 721 204 111 0 0 chrX 17870474 17870510 -4552317 + (CTG)n Simple_repeat Simple_repeat 2 37 0 1 721 330 107 0 0 chrX 17871464 17871520 -4551307 + (CGAAT)n Simple_repeat Simple_repeat 4 59 0 1 721 224 197 14 27 chrX 17872378 17872451 -4550376 + (GGTTG)n Simple_repeat Simple_repeat 3 74 0 1 721 207 146 0 0 chrX 17872623 17872664 -4550163 + (CGGGA)n Simple_repeat Simple_repeat 3 43 0 1 721 651 248 43 15 chrX 17873045 17873371 -4549456 - SAR_DM Satellite Satellite -995 334 1 1 721 186 118 0 0 chrX 17873801 17873835 -4548992 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 721 240 35 0 0 chrX 17874907 17874936 -4547891 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 1 721 246 32 0 0 chrX 17875748 17875779 -4547048 + (CCAA)n Simple_repeat Simple_repeat 3 33 0 1 721 264 122 0 0 chrX 17876167 17876208 -4546619 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 721 212 210 16 16 chrX 17876832 17876895 -4545932 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 721 223 265 12 12 chrX 17877273 17877357 -4545470 + (CAA)n Simple_repeat Simple_repeat 1 84 0 1 721 189 74 0 0 chrX 17877797 17877824 -4545003 + (AGTTG)n Simple_repeat Simple_repeat 3 29 0 1 721 202 214 0 0 chrX 17877841 17877883 -4544944 + CT-rich Low_complexity Low_complexity 1 42 0 1 721 195 162 0 0 chrX 17878760 17878797 -4544030 + CT-rich Low_complexity Low_complexity 2 38 0 1 721 186 43 0 0 chrX 17880207 17880230 -4542597 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 721 231 222 0 0 chrX 17880770 17880824 -4542003 + T-rich Low_complexity Low_complexity 1 54 0 1 721 219 299 22 18 chrX 17880857 17881045 -4541782 + A-rich Low_complexity Low_complexity 1 188 0 1 721 732 119 0 0 chrX 17884523 17884641 -4538186 + (ACTG)n Simple_repeat Simple_repeat 3 120 0 1 721 222 161 15 61 chrX 17884977 17885043 -4537784 + (CTGTG)n Simple_repeat Simple_repeat 1 63 0 1 721 214 200 0 48 chrX 17885150 17885213 -4537614 + A-rich Low_complexity Low_complexity 5 64 0 1 721 21 36 0 0 chrX 17886387 17886415 -4536412 + AT_rich Low_complexity Low_complexity 1 28 0 1 721 207 186 0 0 chrX 17887580 17887623 -4535204 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 721 285 98 0 0 chrX 17888963 17889004 -4533823 + (CTG)n Simple_repeat Simple_repeat 3 43 0 1 721 312 83 0 0 chrX 17889115 17889163 -4533664 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 721 213 108 0 0 chrX 17889294 17889331 -4533496 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 721 209 182 18 0 chrX 17889743 17889798 -4533029 + GA-rich Low_complexity Low_complexity 2 57 0 1 721 183 42 0 0 chrX 17890188 17890212 -4532615 + (CTAAA)n Simple_repeat Simple_repeat 2 25 0 1 721 207 224 0 0 chrX 17891738 17891814 -4531013 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 721 192 200 0 0 chrX 17892200 17892255 -4530572 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 721 216 188 15 30 chrX 17892617 17892683 -4530144 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 721 240 149 0 0 chrX 17892915 17892962 -4529865 + (CGGA)n Simple_repeat Simple_repeat 2 48 0 1 721 211 191 0 0 chrX 17894060 17894102 -4528725 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 721 180 0 0 0 chrX 17894338 17894358 -4528469 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 721 219 146 0 0 chrX 17894620 17894661 -4528166 + (CAG)n Simple_repeat Simple_repeat 1 41 0 1 721 261 83 0 0 chrX 17894767 17894803 -4528024 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 721 282 125 0 0 chrX 17894906 17894954 -4527873 + (CAG)n Simple_repeat Simple_repeat 3 50 0 1 721 212 271 0 0 chrX 17894998 17895046 -4527781 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 1 721 183 184 0 0 chrX 17897911 17897949 -4524878 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 721 22 35 0 0 chrX 17898470 17898499 -4524328 + AT_rich Low_complexity Low_complexity 1 29 0 1 721 25 31 0 0 chrX 17898524 17898556 -4524271 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 201 154 0 0 chrX 17898712 17898751 -4524076 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 721 29 0 0 0 chrX 17899324 17899353 -4523474 + AT_rich Low_complexity Low_complexity 1 29 0 1 721 414 114 0 0 chrX 17900341 17900411 -4522416 + (CTG)n Simple_repeat Simple_repeat 2 71 0 1 721 234 160 0 0 chrX 17901212 17901262 -4521565 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 721 214 239 0 0 chrX 17901291 17901337 -4521490 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 721 253 289 40 81 chrX 17901430 17901603 -4521224 - ROO_I LTR Pao -7519 737 572 1 721 23 33 0 0 chrX 17901819 17901849 -4520978 + AT_rich Low_complexity Low_complexity 1 30 0 1 721 25 31 0 0 chrX 17902371 17902403 -4520424 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 239 299 0 0 chrX 17902507 17902574 -4520253 + ROO_I LTR Pao 640 706 -7550 1 721 258 81 0 0 chrX 17902582 17902619 -4520208 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 721 195 42 0 0 chrX 17902651 17902675 -4520152 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 721 215 234 0 0 chrX 17902825 17902872 -4519955 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 1 721 254 259 37 0 chrX 17903604 17903685 -4519142 + (TCG)n Simple_repeat Simple_repeat 3 86 0 1 721 215 180 0 39 chrX 17903730 17903782 -4519045 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 721 222 37 0 0 chrX 17904370 17904397 -4518430 + (AACTG)n Simple_repeat Simple_repeat 1 27 0 1 721 29 0 0 0 chrX 17905264 17905293 -4517534 + AT_rich Low_complexity Low_complexity 1 29 0 1 721 39 22 0 0 chrX 17906336 17906382 -4516445 + AT_rich Low_complexity Low_complexity 1 46 0 1 721 30 45 0 0 chrX 17907925 17907969 -4514858 + AT_rich Low_complexity Low_complexity 1 44 0 1 721 231 247 0 0 chrX 17908202 17908275 -4514552 + (CGG)n Simple_repeat Simple_repeat 3 75 0 1 721 249 33 0 0 chrX 17908554 17908584 -4514243 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 721 31 76 0 0 chrX 17909549 17909615 -4513212 + AT_rich Low_complexity Low_complexity 1 66 0 1 721 189 0 0 0 chrX 17911720 17911741 -4511086 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1 721 32 0 0 0 chrX 17913368 17913400 -4509427 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 186 143 0 0 chrX 17914548 17914583 -4508244 + (T)n Simple_repeat Simple_repeat 1 35 0 1 721 28 95 0 0 chrX 17915029 17915113 -4507714 + AT_rich Low_complexity Low_complexity 1 84 0 1 721 29 28 0 0 chrX 17916144 17916180 -4506647 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 215 308 0 15 chrX 17916705 17916771 -4506056 + (CGGG)n Simple_repeat Simple_repeat 2 66 0 1 721 198 215 0 0 chrX 17917938 17918017 -4504810 + CT-rich Low_complexity Low_complexity 1 79 0 1 721 26 0 0 0 chrX 17924161 17924187 -4498640 + AT_rich Low_complexity Low_complexity 1 26 0 1 721 567 88 0 117 chrX 17925302 17925405 -4497422 + DNAREP1_DM LINE Penelope 355 445 -149 1 721 286 93 0 0 chrX 17925409 17925452 -4497375 + DNAREP1_DM LINE Penelope 552 594 0 1 721 30 27 0 0 chrX 17928474 17928511 -4494316 + AT_rich Low_complexity Low_complexity 1 37 0 1 721 23 33 0 0 chrX 17929749 17929779 -4493048 + AT_rich Low_complexity Low_complexity 1 30 0 1 721 288 91 0 0 chrX 17929914 17929958 -4492869 + (CAGAGA)n Simple_repeat Simple_repeat 5 48 0 1 721 180 111 0 0 chrX 17931194 17931221 -4491606 + (CTG)n Simple_repeat Simple_repeat 3 29 0 1 721 33 0 0 0 chrX 17931243 17931276 -4491551 + AT_rich Low_complexity Low_complexity 1 33 0 1 721 30 77 0 0 chrX 17933042 17933107 -4489720 + AT_rich Low_complexity Low_complexity 1 65 0 1 721 204 222 0 0 chrX 17934884 17934956 -4487871 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 721 222 118 0 0 chrX 17935053 17935087 -4487740 + (CACCAT)n Simple_repeat Simple_repeat 4 37 0 1 721 22 0 0 0 chrX 17940286 17940308 -4482519 + AT_rich Low_complexity Low_complexity 1 22 0 1 721 26 0 0 0 chrX 17943931 17943957 -4478870 + AT_rich Low_complexity Low_complexity 1 26 0 1 721 200 216 0 0 chrX 17946412 17946449 -4476378 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1 721 207 310 0 0 chrX 17947517 17947575 -4475252 + GA-rich Low_complexity Low_complexity 2 59 0 1 721 186 174 0 0 chrX 17947628 17947674 -4475153 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 721 219 114 0 0 chrX 17947860 17947895 -4474932 + (CATA)n Simple_repeat Simple_repeat 3 37 0 1 721 270 179 0 0 chrX 17948554 17948610 -4474217 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 721 32 86 0 0 chrX 17949124 17949205 -4473622 + AT_rich Low_complexity Low_complexity 1 81 0 1 721 24 32 0 0 chrX 17949925 17949956 -4472871 + AT_rich Low_complexity Low_complexity 1 31 0 1 721 204 219 15 30 chrX 17950184 17950250 -4472577 + T-rich Low_complexity Low_complexity 1 65 0 1 721 279 93 0 0 chrX 17950494 17950537 -4472290 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 721 209 222 0 0 chrX 17951381 17951426 -4471401 + A-rich Low_complexity Low_complexity 1 45 0 1 721 202 109 0 61 chrX 17952298 17952347 -4470480 + (TTATA)n Simple_repeat Simple_repeat 2 47 0 1 721 225 151 0 36 chrX 17954290 17954345 -4468482 + (CGAAA)n Simple_repeat Simple_repeat 2 54 0 1 721 304 274 28 0 chrX 17954667 17954773 -4468054 + (TG)n Simple_repeat Simple_repeat 1 109 0 1 721 183 42 0 0 chrX 17955608 17955632 -4467195 + (AGGGGG)n Simple_repeat Simple_repeat 5 28 0 1 721 189 147 0 0 chrX 17955800 17955834 -4466993 + (CATTT)n Simple_repeat Simple_repeat 3 36 0 1 721 204 137 0 89 chrX 17956675 17956731 -4466096 + A-rich Low_complexity Low_complexity 3 53 0 1 722 347 190 0 37 chrX 17957163 17957245 -4465582 - ROO_I LTR Pao -7522 734 656 1 722 22 35 0 0 chrX 17958023 17958052 -4464775 + AT_rich Low_complexity Low_complexity 1 29 0 1 722 198 103 0 0 chrX 17958700 17958729 -4464098 + (GGAGAA)n Simple_repeat Simple_repeat 5 33 0 1 722 21 0 0 0 chrX 17962603 17962624 -4460203 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 198 71 0 0 chrX 17972948 17972976 -4449851 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 722 21 36 0 0 chrX 17977193 17977221 -4445606 + AT_rich Low_complexity Low_complexity 1 28 0 1 722 21 36 0 0 chrX 17977317 17977345 -4445482 + AT_rich Low_complexity Low_complexity 1 28 0 1 722 33 80 0 0 chrX 17984719 17984794 -4438033 + AT_rich Low_complexity Low_complexity 1 75 0 1 722 25 0 0 0 chrX 17985202 17985227 -4437600 + AT_rich Low_complexity Low_complexity 1 25 0 1 722 201 213 21 0 chrX 17991820 17991867 -4430960 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 722 228 67 0 0 chrX 17993815 17993845 -4428982 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 722 23 0 0 0 chrX 17995450 17995473 -4427354 + AT_rich Low_complexity Low_complexity 1 23 0 1 722 29 0 0 0 chrX 17997303 17997332 -4425495 + AT_rich Low_complexity Low_complexity 1 29 0 1 722 26 0 0 0 chrX 17997453 17997479 -4425348 + AT_rich Low_complexity Low_complexity 1 26 0 1 722 47 53 0 0 chrX 17999588 17999663 -4423164 + AT_rich Low_complexity Low_complexity 1 75 0 1 722 259 259 12 0 chrX 17999826 17999907 -4422920 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 722 228 67 0 0 chrX 18001292 18001322 -4421505 + (CGAG)n Simple_repeat Simple_repeat 4 33 0 1 722 183 100 0 0 chrX 18001577 18001607 -4421220 + (TAGA)n Simple_repeat Simple_repeat 2 31 0 1 722 189 0 0 0 chrX 18001830 18001851 -4420976 + (CTTTG)n Simple_repeat Simple_repeat 2 22 0 1 722 372 135 0 0 chrX 18002115 18002189 -4420638 + (GA)n Simple_repeat Simple_repeat 2 75 0 1 722 237 216 0 19 chrX 18003870 18003922 -4418905 + (CGGAA)n Simple_repeat Simple_repeat 5 55 0 1 722 207 254 16 0 chrX 18004718 18004781 -4418046 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 722 216 345 0 28 chrX 18004799 18004975 -4417852 + GA-rich Low_complexity Low_complexity 2 172 0 1 722 184 91 22 22 chrX 18005001 18005046 -4417781 + (TTTG)n Simple_repeat Simple_repeat 3 47 0 1 722 180 77 0 0 chrX 18006139 18006165 -4416662 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 722 234 0 0 0 chrX 18006788 18006814 -4416013 + (TGG)n Simple_repeat Simple_repeat 1 26 0 1 722 209 290 0 0 chrX 18007881 18007950 -4414877 + (CCG)n Simple_repeat Simple_repeat 2 70 0 1 722 234 176 0 0 chrX 18008801 18008852 -4413975 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 722 191 177 16 0 chrX 18010100 18010162 -4412665 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 722 213 121 0 0 chrX 18010281 18010314 -4412513 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 722 225 108 0 0 chrX 18010518 18010555 -4412272 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 722 342 143 0 0 chrX 18012209 18012272 -4410555 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 722 228 219 0 30 chrX 18012420 18012486 -4410341 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 722 276 30 0 0 chrX 18013327 18013360 -4409467 + (TCG)n Simple_repeat Simple_repeat 2 34 0 1 722 281 100 20 0 chrX 18013476 18013526 -4409301 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 722 27 0 0 0 chrX 18014033 18014060 -4408767 + AT_rich Low_complexity Low_complexity 1 27 0 1 722 234 0 0 0 chrX 18015904 18015930 -4406897 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 722 189 107 0 0 chrX 18016545 18016573 -4406254 + (CAG)n Simple_repeat Simple_repeat 3 30 0 1 722 22 35 0 0 chrX 18017339 18017368 -4405459 + AT_rich Low_complexity Low_complexity 1 29 0 1 722 210 222 0 0 chrX 18018080 18018125 -4404702 + (CCG)n Simple_repeat Simple_repeat 1 45 0 1 722 265 91 0 0 chrX 18023527 18023560 -4399267 - DNAREP1_DM LINE Penelope -530 64 32 1 722 21 0 0 0 chrX 18024430 18024451 -4398376 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 237 33 0 0 chrX 18024793 18024823 -4398004 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 722 447 38 0 0 chrX 18025351 18025404 -4397423 - PROTOP_B DNA P 0 1153 1101 1 722 1059 74 136 19 chrX 18025402 18025608 -4397219 - PROTOP_B DNA P -275 878 649 1 722 3239 59 52 2 chrX 18025609 18026036 -4396791 - PROTOP_B DNA P -708 445 1 1 722 267 93 0 0 chrX 18026305 18026348 -4396479 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 722 33 25 0 0 chrX 18026412 18026452 -4396375 + AT_rich Low_complexity Low_complexity 1 40 0 1 722 309 118 0 0 chrX 18026632 18026683 -4396144 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 722 22 0 0 0 chrX 18028476 18028498 -4394329 + AT_rich Low_complexity Low_complexity 1 22 0 1 722 231 244 11 58 chrX 18030849 18030936 -4391891 + T-rich Low_complexity Low_complexity 1 83 0 1 722 264 164 343 0 chrX 18032112 18032212 -4390615 - DNAREP1_DM LINE Penelope -9 585 451 1 722 24 32 0 0 chrX 18032356 18032387 -4390440 + AT_rich Low_complexity Low_complexity 1 31 0 1 722 263 253 11 54 chrX 18033466 18033558 -4389269 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 1 722 218 125 0 20 chrX 18034571 18034620 -4388207 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 722 21 0 0 0 chrX 18035003 18035024 -4387803 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 186 133 0 0 chrX 18035158 18035188 -4387639 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1 722 26 0 0 0 chrX 18035530 18035556 -4387271 + AT_rich Low_complexity Low_complexity 1 26 0 1 722 201 74 0 0 chrX 18035606 18035633 -4387194 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 722 231 140 0 0 chrX 18038078 18038128 -4384699 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 722 227 190 0 17 chrX 18038410 18038469 -4384358 + (CATATA)n Simple_repeat Simple_repeat 1 58 0 1 722 214 258 0 0 chrX 18039555 18039621 -4383206 + A-rich Low_complexity Low_complexity 1 66 0 1 722 236 175 0 16 chrX 18039779 18039843 -4382984 + (CCGAA)n Simple_repeat Simple_repeat 4 66 0 1 722 314 196 0 0 chrX 18041043 18041099 -4381728 + DNAREP1_DM LINE Penelope 1 56 -538 1 722 370 164 0 0 chrX 18041200 18041261 -4381566 + DNAREP1_DM LINE Penelope 534 594 0 1 722 213 159 0 0 chrX 18041396 18041440 -4381387 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 722 23 0 0 0 chrX 18041562 18041585 -4381242 + AT_rich Low_complexity Low_complexity 1 23 0 1 722 21 71 0 0 chrX 18042656 18042698 -4380129 + AT_rich Low_complexity Low_complexity 1 42 0 1 722 216 111 0 0 chrX 18044282 18044318 -4378509 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 722 233 182 0 18 chrX 18044504 18044560 -4378267 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 722 23 68 0 0 chrX 18045672 18045716 -4377111 + AT_rich Low_complexity Low_complexity 1 44 0 1 722 222 105 0 0 chrX 18046389 18046427 -4376400 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 722 221 0 0 33 chrX 18046929 18046959 -4375868 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 722 266 222 0 40 chrX 18049527 18049602 -4373225 + (CAA)n Simple_repeat Simple_repeat 1 72 0 1 722 21 0 0 0 chrX 18049719 18049740 -4373087 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 240 86 0 0 chrX 18049928 18049963 -4372864 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 722 37 0 0 0 chrX 18050158 18050195 -4372632 + AT_rich Low_complexity Low_complexity 1 37 0 1 722 180 0 0 0 chrX 18052926 18052946 -4369881 + (T)n Simple_repeat Simple_repeat 1 20 0 1 722 209 204 0 0 chrX 18053154 18053198 -4369629 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 722 204 40 0 0 chrX 18053219 18053244 -4369583 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 722 251 122 20 0 chrX 18053297 18053346 -4369481 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 722 267 114 0 0 chrX 18054906 18054950 -4367877 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 722 22 35 0 0 chrX 18055015 18055044 -4367783 + AT_rich Low_complexity Low_complexity 1 29 0 1 722 280 125 0 30 chrX 18055170 18055236 -4367591 + (CAA)n Simple_repeat Simple_repeat 1 64 0 1 722 24 0 0 0 chrX 18055555 18055579 -4367248 + AT_rich Low_complexity Low_complexity 1 24 0 1 722 207 100 0 0 chrX 18055942 18055972 -4366855 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 722 306 50 0 0 chrX 18056318 18056358 -4366469 + (ATTCG)n Simple_repeat Simple_repeat 3 42 0 1 722 285 29 0 0 chrX 18057610 18057644 -4365183 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 722 60 59 0 0 chrX 18059769 18059871 -4362956 + AT_rich Low_complexity Low_complexity 1 102 0 1 722 189 0 0 0 chrX 18060152 18060173 -4362654 + (C)n Simple_repeat Simple_repeat 1 21 0 1 722 219 152 0 0 chrX 18060283 18060329 -4362498 + T-rich Low_complexity Low_complexity 1 46 0 1 722 201 139 0 0 chrX 18060654 18060697 -4362130 + (GGA)n Simple_repeat Simple_repeat 2 44 0 1 722 198 91 0 0 chrX 18061733 18061766 -4361061 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 722 270 56 0 0 chrX 18061914 18061950 -4360877 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 722 276 130 0 0 chrX 18062214 18062260 -4360567 + (TTG)n Simple_repeat Simple_repeat 1 46 0 1 722 257 234 0 0 chrX 18063399 18063463 -4359364 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 722 201 154 0 0 chrX 18064306 18064345 -4358482 + A-rich Low_complexity Low_complexity 1 39 0 1 722 218 200 0 18 chrX 18064560 18064616 -4358211 + A-rich Low_complexity Low_complexity 3 57 0 1 722 222 91 0 0 chrX 18065008 18065041 -4357786 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 722 369 156 0 0 chrX 18065742 18065819 -4357008 + CT-rich Low_complexity Low_complexity 2 78 0 1 722 197 33 0 32 chrX 18065874 18065905 -4356922 + (CAAAC)n Simple_repeat Simple_repeat 3 32 0 1 722 210 37 0 0 chrX 18066224 18066251 -4356576 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 722 216 188 0 0 chrX 18066500 18066564 -4356263 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 722 240 143 0 0 chrX 18066793 18066835 -4355992 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 722 249 155 0 0 chrX 18066988 18067046 -4355781 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 722 183 42 0 0 chrX 18067165 18067189 -4355638 + (CGAAA)n Simple_repeat Simple_repeat 2 25 0 1 722 21 36 0 0 chrX 18067189 18067217 -4355610 + AT_rich Low_complexity Low_complexity 1 28 0 1 722 236 189 14 0 chrX 18067360 18067434 -4355393 + (CA)n Simple_repeat Simple_repeat 1 75 0 1 722 21 0 0 0 chrX 18067506 18067527 -4355300 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 340 153 12 12 chrX 18067883 18067969 -4354858 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 722 229 94 18 36 chrX 18068281 18068336 -4354491 + (CAAAAA)n Simple_repeat Simple_repeat 5 58 0 1 722 21 0 0 0 chrX 18068657 18068678 -4354149 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 216 0 0 0 chrX 18068946 18068970 -4353857 + (CATA)n Simple_repeat Simple_repeat 4 27 0 1 722 185 31 0 86 chrX 18071844 18071879 -4350948 + (A)n Simple_repeat Simple_repeat 1 32 0 1 722 294 95 0 0 chrX 18076599 18076641 -4346186 + (TTTCG)n Simple_repeat Simple_repeat 2 43 0 1 722 183 42 0 0 chrX 18077409 18077433 -4345394 + (T)n Simple_repeat Simple_repeat 1 24 0 1 722 222 62 0 0 chrX 18077658 18077690 -4345137 + (CTG)n Simple_repeat Simple_repeat 2 33 0 1 722 23 0 0 0 chrX 18079170 18079193 -4343634 + AT_rich Low_complexity Low_complexity 1 23 0 1 722 219 125 0 0 chrX 18079231 18079271 -4343556 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 722 189 0 0 0 chrX 18079834 18079855 -4342972 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 722 396 138 0 0 chrX 18080718 18080783 -4342044 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 722 180 0 0 0 chrX 18081508 18081528 -4341299 + (CATAA)n Simple_repeat Simple_repeat 5 24 0 1 722 183 42 0 0 chrX 18081853 18081877 -4340950 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 722 213 159 0 0 chrX 18082515 18082559 -4340268 + T-rich Low_complexity Low_complexity 2 45 0 1 722 198 171 0 0 chrX 18083708 18083749 -4339078 + (CGA)n Simple_repeat Simple_repeat 2 42 0 1 722 225 65 0 0 chrX 18083872 18083903 -4338924 + (CAGC)n Simple_repeat Simple_repeat 1 31 0 1 722 186 43 0 0 chrX 18084747 18084770 -4338057 + (TCG)n Simple_repeat Simple_repeat 3 25 0 1 722 21 0 0 0 chrX 18085287 18085308 -4337519 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 202 194 0 0 chrX 18087577 18087613 -4335214 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 723 4355 6 0 0 chrX 18088159 18088630 -4334197 - BS LINE Jockey -1 5125 4655 1 723 195 42 0 0 chrX 18091148 18091172 -4331655 + (AGTTG)n Simple_repeat Simple_repeat 1 24 0 1 723 207 139 0 0 chrX 18091209 18091245 -4331582 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 723 236 265 0 24 chrX 18093641 18093726 -4329101 + CT-rich Low_complexity Low_complexity 2 84 0 1 723 195 184 0 0 chrX 18093885 18093923 -4328904 + (CAT)n Simple_repeat Simple_repeat 1 38 0 1 723 231 261 43 0 chrX 18094005 18094074 -4328753 + (CATA)n Simple_repeat Simple_repeat 3 74 0 1 723 274 61 20 20 chrX 18095675 18095725 -4327102 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 723 246 194 0 0 chrX 18096902 18096964 -4325863 + CT-rich Low_complexity Low_complexity 2 63 0 1 723 388 194 16 0 chrX 18097511 18097640 -4325187 + (TA)n Simple_repeat Simple_repeat 1 131 0 1 723 21 0 0 0 chrX 18099869 18099890 -4322937 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 31 0 0 0 chrX 18101591 18101622 -4321205 + AT_rich Low_complexity Low_complexity 1 31 0 1 723 26 50 0 0 chrX 18101700 18101740 -4321087 + AT_rich Low_complexity Low_complexity 1 40 0 1 723 222 91 0 0 chrX 18102360 18102393 -4320434 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 723 186 133 0 0 chrX 18102453 18102483 -4320344 + (CAATC)n Simple_repeat Simple_repeat 5 34 0 1 723 21 0 0 0 chrX 18102626 18102647 -4320180 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 186 43 0 0 chrX 18103319 18103342 -4319485 + (A)n Simple_repeat Simple_repeat 1 23 0 1 723 23 0 0 0 chrX 18103889 18103912 -4318915 + AT_rich Low_complexity Low_complexity 1 23 0 1 723 239 220 0 0 chrX 18104560 18104610 -4318217 + GA-rich Low_complexity Low_complexity 1 50 0 1 723 235 336 8 15 chrX 18106152 18106285 -4316542 + (TA)n Simple_repeat Simple_repeat 2 133 0 1 723 222 282 9 28 chrX 18106298 18106404 -4316423 + (TCTCTG)n Simple_repeat Simple_repeat 4 107 0 1 723 207 0 0 0 chrX 18109409 18109432 -4313395 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 723 213 39 0 0 chrX 18111643 18111669 -4311158 + (T)n Simple_repeat Simple_repeat 1 26 0 1 723 216 234 21 0 chrX 18112424 18112471 -4310356 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 1 723 231 306 0 0 chrX 18116858 18116930 -4305897 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 723 243 152 0 0 chrX 18117619 18117665 -4305162 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 723 291 28 0 0 chrX 18118959 18118995 -4303832 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 723 273 197 0 0 chrX 18119228 18119289 -4303538 + (TTG)n Simple_repeat Simple_repeat 3 63 0 1 723 186 118 0 0 chrX 18119949 18119983 -4302844 + (A)n Simple_repeat Simple_repeat 1 34 0 1 723 258 116 0 0 chrX 18120045 18120088 -4302739 + (CTG)n Simple_repeat Simple_repeat 3 45 0 1 723 183 139 0 0 chrX 18120347 18120383 -4302444 + (TTTTA)n Simple_repeat Simple_repeat 3 38 0 1 723 207 357 0 0 chrX 18120779 18120877 -4301950 + (TAG)n Simple_repeat Simple_repeat 2 99 0 1 723 252 100 0 0 chrX 18121266 18121306 -4301521 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 723 233 0 62 0 chrX 18121536 18121568 -4301259 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1 723 260 137 20 0 chrX 18121886 18121937 -4300890 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 723 207 188 0 0 chrX 18122967 18123015 -4299812 + A-rich Low_complexity Low_complexity 1 48 0 1 723 262 250 0 0 chrX 18123959 18124019 -4298808 + (TCG)n Simple_repeat Simple_repeat 3 62 0 1 723 30 0 0 0 chrX 18124695 18124725 -4298102 + AT_rich Low_complexity Low_complexity 1 30 0 1 723 225 259 0 0 chrX 18124823 18124877 -4297950 + (CAGT)n Simple_repeat Simple_repeat 3 56 0 1 723 363 119 0 0 chrX 18126549 18126616 -4296211 + (GGATG)n Simple_repeat Simple_repeat 3 69 0 1 723 234 0 0 0 chrX 18129130 18129156 -4293671 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 723 201 121 0 0 chrX 18130340 18130373 -4292454 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 723 195 146 0 0 chrX 18132187 18132228 -4290599 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 723 236 238 0 45 chrX 18137273 18137339 -4285488 + (ACTG)n Simple_repeat Simple_repeat 2 64 0 1 723 228 35 0 0 chrX 18137351 18137380 -4285447 + (CTG)n Simple_repeat Simple_repeat 1 29 0 1 723 249 108 0 0 chrX 18137577 18137614 -4285213 + (TGAG)n Simple_repeat Simple_repeat 2 38 0 1 723 180 77 0 0 chrX 18137820 18137846 -4284981 + (CCCGA)n Simple_repeat Simple_repeat 2 27 0 1 723 222 118 0 0 chrX 18138138 18138172 -4284655 + (TTG)n Simple_repeat Simple_repeat 1 34 0 1 723 201 147 0 0 chrX 18138775 18138809 -4284018 + (CAGC)n Simple_repeat Simple_repeat 3 36 0 1 723 23 0 0 0 chrX 18139063 18139086 -4283741 + AT_rich Low_complexity Low_complexity 1 23 0 1 723 189 0 0 0 chrX 18139290 18139311 -4283516 + (CAG)n Simple_repeat Simple_repeat 1 21 0 1 723 22 0 0 0 chrX 18140890 18140912 -4281915 + AT_rich Low_complexity Low_complexity 1 22 0 1 723 201 39 0 0 chrX 18140953 18140979 -4281848 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 723 195 129 0 0 chrX 18142568 18142599 -4280228 + (CAG)n Simple_repeat Simple_repeat 1 31 0 1 723 35 41 0 0 chrX 18142874 18142923 -4279904 + AT_rich Low_complexity Low_complexity 1 49 0 1 723 26 0 0 0 chrX 18143171 18143197 -4279630 + AT_rich Low_complexity Low_complexity 1 26 0 1 723 22 56 0 0 chrX 18143307 18143343 -4279484 + AT_rich Low_complexity Low_complexity 1 36 0 1 723 186 103 0 0 chrX 18143754 18143783 -4279044 + (A)n Simple_repeat Simple_repeat 1 29 0 1 723 211 262 0 8 chrX 18143920 18143995 -4278832 + T-rich Low_complexity Low_complexity 1 74 0 1 723 237 33 0 0 chrX 18144762 18144792 -4278035 + (T)n Simple_repeat Simple_repeat 1 30 0 1 723 24 67 0 0 chrX 18145291 18145336 -4277491 + AT_rich Low_complexity Low_complexity 1 45 0 1 723 237 204 0 0 chrX 18145932 18145976 -4276851 + (CGGA)n Simple_repeat Simple_repeat 2 45 0 1 723 189 74 0 0 chrX 18146650 18146677 -4276150 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1 723 201 39 0 0 chrX 18149619 18149645 -4273182 + (CGAT)n Simple_repeat Simple_repeat 3 28 0 1 723 192 152 0 0 chrX 18149912 18149945 -4272882 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1 723 288 77 0 0 chrX 18150112 18150151 -4272676 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1 723 25 90 0 0 chrX 18150486 18150553 -4272274 + AT_rich Low_complexity Low_complexity 1 67 0 1 723 273 29 0 0 chrX 18151349 18151383 -4271444 + (TCC)n Simple_repeat Simple_repeat 1 34 0 1 723 186 43 0 0 chrX 18152146 18152169 -4270658 + (TCCA)n Simple_repeat Simple_repeat 3 25 0 1 723 231 36 0 0 chrX 18154629 18154657 -4268170 + (AAATG)n Simple_repeat Simple_repeat 5 32 0 1 723 243 192 0 0 chrX 18155886 18155938 -4266889 + ROO_I LTR Pao 656 707 -7549 1 723 31 26 0 0 chrX 18156384 18156422 -4266405 + AT_rich Low_complexity Low_complexity 1 38 0 1 723 378 61 0 0 chrX 18156785 18156834 -4265993 + (CAG)n Simple_repeat Simple_repeat 3 51 0 1 723 231 103 0 0 chrX 18158488 18158527 -4264300 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 723 207 69 0 0 chrX 18161977 18162006 -4260821 + (CTG)n Simple_repeat Simple_repeat 2 30 0 1 723 26 50 0 0 chrX 18162688 18162728 -4260099 + AT_rich Low_complexity Low_complexity 1 40 0 1 723 201 182 0 0 chrX 18163373 18163406 -4259421 + (AACTG)n Simple_repeat Simple_repeat 1 33 0 1 723 240 86 0 0 chrX 18163464 18163499 -4259328 + (GAGTG)n Simple_repeat Simple_repeat 3 37 0 1 723 246 255 0 0 chrX 18163711 18163805 -4259022 + (GCTG)n Simple_repeat Simple_repeat 2 95 0 1 723 228 111 0 0 chrX 18164124 18164160 -4258667 + (CAG)n Simple_repeat Simple_repeat 3 38 0 1 723 233 75 0 24 chrX 18165094 18165135 -4257692 + (GATTG)n Simple_repeat Simple_repeat 5 44 0 1 723 183 80 0 0 chrX 18165900 18165925 -4256902 + (CCG)n Simple_repeat Simple_repeat 1 25 0 1 723 207 200 0 0 chrX 18166328 18166368 -4256459 + (ATG)n Simple_repeat Simple_repeat 1 40 0 1 723 22 35 0 0 chrX 18166593 18166622 -4256205 + AT_rich Low_complexity Low_complexity 1 29 0 1 723 21 36 0 0 chrX 18167311 18167339 -4255488 + AT_rich Low_complexity Low_complexity 1 28 0 1 723 24 32 0 0 chrX 18167396 18167427 -4255400 + AT_rich Low_complexity Low_complexity 1 31 0 1 723 25 31 0 0 chrX 18168721 18168753 -4254074 + AT_rich Low_complexity Low_complexity 1 32 0 1 723 24 0 0 0 chrX 18169147 18169171 -4253656 + AT_rich Low_complexity Low_complexity 1 24 0 1 723 198 103 0 0 chrX 18170107 18170136 -4252691 + (CGGAA)n Simple_repeat Simple_repeat 1 29 0 1 723 207 88 0 0 chrX 18171208 18171242 -4251585 + (CACTC)n Simple_repeat Simple_repeat 5 38 0 1 723 372 139 0 0 chrX 18172321 18172400 -4250427 + (TGG)n Simple_repeat Simple_repeat 2 80 0 1 723 25 51 0 0 chrX 18172737 18172776 -4250051 + AT_rich Low_complexity Low_complexity 1 39 0 1 723 216 0 0 0 chrX 18173240 18173264 -4249563 + (T)n Simple_repeat Simple_repeat 1 24 0 1 723 22 0 0 0 chrX 18175768 18175790 -4247037 + AT_rich Low_complexity Low_complexity 1 22 0 1 723 35 0 0 0 chrX 18178282 18178317 -4244510 + AT_rich Low_complexity Low_complexity 1 35 0 1 723 189 175 0 0 chrX 18179816 18179856 -4242971 + CT-rich Low_complexity Low_complexity 1 40 0 1 723 21 0 0 0 chrX 18181010 18181031 -4241796 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 22 56 0 0 chrX 18182406 18182442 -4240385 + AT_rich Low_complexity Low_complexity 1 36 0 1 723 201 132 0 0 chrX 18182805 18182843 -4239984 + (GGGAGA)n Simple_repeat Simple_repeat 5 42 0 1 723 198 71 0 0 chrX 18183935 18183963 -4238864 + (TTCGG)n Simple_repeat Simple_repeat 4 31 0 1 723 291 93 0 0 chrX 18184858 18184901 -4237926 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 723 267 103 0 0 chrX 18185039 18185078 -4237749 + (CGGA)n Simple_repeat Simple_repeat 1 39 0 1 723 187 191 16 16 chrX 18185302 18185366 -4237461 + (CAG)n Simple_repeat Simple_repeat 2 65 0 1 723 213 139 0 0 chrX 18186896 18186939 -4235888 + (A)n Simple_repeat Simple_repeat 1 43 0 1 723 240 130 0 0 chrX 18188516 18188562 -4234265 + (AGATG)n Simple_repeat Simple_repeat 1 46 0 1 723 23 0 0 0 chrX 18189137 18189160 -4233667 + AT_rich Low_complexity Low_complexity 1 23 0 1 723 189 74 0 0 chrX 18190659 18190686 -4232141 + (CCCCCT)n Simple_repeat Simple_repeat 4 30 0 1 723 201 94 0 0 chrX 18190954 18190986 -4231841 + (T)n Simple_repeat Simple_repeat 1 32 0 1 723 183 80 0 0 chrX 18192059 18192084 -4230743 + (CGAAT)n Simple_repeat Simple_repeat 2 26 0 1 723 180 77 0 0 chrX 18192208 18192234 -4230593 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 723 234 116 0 0 chrX 18192551 18192594 -4230233 + (T)n Simple_repeat Simple_repeat 1 43 0 1 723 206 204 0 39 chrX 18192827 18192878 -4229949 + (CACTC)n Simple_repeat Simple_repeat 4 52 0 1 723 228 67 0 0 chrX 18194654 18194684 -4228143 + (CCGAA)n Simple_repeat Simple_repeat 3 32 0 1 723 261 0 0 0 chrX 18195016 18195045 -4227782 + (CAA)n Simple_repeat Simple_repeat 1 29 0 1 723 264 176 0 0 chrX 18195889 18195957 -4226870 + T-rich Low_complexity Low_complexity 1 68 0 1 723 237 108 0 0 chrX 18196610 18196647 -4226180 + (CAT)n Simple_repeat Simple_repeat 3 39 0 1 723 219 114 0 0 chrX 18196726 18196761 -4226066 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 723 213 180 0 0 chrX 18198252 18198302 -4224525 + (CCCGAA)n Simple_repeat Simple_repeat 6 55 0 1 723 270 95 0 0 chrX 18199871 18199913 -4222914 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 723 220 274 0 0 chrX 18202168 18202241 -4220586 + T-rich Low_complexity Low_complexity 1 73 0 1 723 227 31 31 0 chrX 18203253 18203285 -4219542 + (ACCG)n Simple_repeat Simple_repeat 4 36 0 1 723 25 51 0 0 chrX 18204022 18204061 -4218766 + AT_rich Low_complexity Low_complexity 1 39 0 1 723 32 57 0 0 chrX 18204138 18204191 -4218636 + AT_rich Low_complexity Low_complexity 1 53 0 1 723 209 180 20 0 chrX 18205757 18205807 -4217020 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 723 214 175 0 0 chrX 18206796 18206836 -4215991 + GA-rich Low_complexity Low_complexity 2 41 0 1 723 243 161 0 0 chrX 18206949 18207005 -4215822 + (CTG)n Simple_repeat Simple_repeat 1 56 0 1 723 21 0 0 0 chrX 18207285 18207306 -4215521 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 210 37 0 0 chrX 18207670 18207697 -4215130 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 1 723 23 78 0 0 chrX 18208161 18208212 -4214615 + AT_rich Low_complexity Low_complexity 1 51 0 1 723 231 61 0 0 chrX 18209675 18209708 -4213119 + (CTG)n Simple_repeat Simple_repeat 1 33 0 1 723 317 167 0 14 chrX 18210116 18210189 -4212638 + ROO_I LTR Pao 651 722 -7534 1 723 180 97 0 0 chrX 18210293 18210324 -4212503 + (GCTTG)n Simple_repeat Simple_repeat 2 32 0 1 723 35 0 0 0 chrX 18211664 18211699 -4211128 + AT_rich Low_complexity Low_complexity 1 35 0 1 723 22 0 0 0 chrX 18212249 18212271 -4210556 + AT_rich Low_complexity Low_complexity 1 22 0 1 723 1876 168 62 3 chrX 18213550 18213980 -4208847 - HELENA_RT LINE Jockey 0 1317 1021 1 723 500 89 0 12 chrX 18216935 18217015 -4205812 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 723 208 278 14 27 chrX 18217788 18217862 -4204965 + (CAA)n Simple_repeat Simple_repeat 2 74 0 1 723 242 237 13 38 chrX 18218409 18218488 -4204339 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 1 723 249 83 0 0 chrX 18218836 18218872 -4203955 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 1 723 324 133 0 0 chrX 18218881 18218941 -4203886 + (TC)n Simple_repeat Simple_repeat 2 61 0 1 724 231 167 0 0 chrX 18219132 18219174 -4203653 + (CAATT)n Simple_repeat Simple_repeat 4 45 0 1 724 201 138 0 0 chrX 18219626 18219655 -4203172 + (TATG)n Simple_repeat Simple_repeat 3 31 0 1 724 240 111 0 0 chrX 18219874 18219910 -4202917 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 724 222 37 0 0 chrX 18225549 18225576 -4197251 + (ATTTG)n Simple_repeat Simple_repeat 2 28 0 1 724 303 28 0 0 chrX 18228798 18228834 -4193993 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 724 234 0 0 0 chrX 18229460 18229486 -4193341 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 724 342 61 0 0 chrX 18229560 18229609 -4193218 + (TCC)n Simple_repeat Simple_repeat 3 51 0 1 724 186 103 0 0 chrX 18229679 18229708 -4193119 + (AATTG)n Simple_repeat Simple_repeat 2 30 0 1 724 22 0 0 0 chrX 18230964 18230986 -4191841 + AT_rich Low_complexity Low_complexity 1 22 0 1 724 201 132 0 0 chrX 18233467 18233505 -4189322 + (A)n Simple_repeat Simple_repeat 1 38 0 1 724 264 59 0 0 chrX 18235439 18235473 -4187354 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 724 271 259 0 11 chrX 18235630 18235720 -4187107 + CT-rich Low_complexity Low_complexity 1 89 0 1 724 213 205 0 0 chrX 18236954 18236993 -4185834 + GA-rich Low_complexity Low_complexity 2 40 0 1 724 273 109 0 0 chrX 18238939 18238985 -4183842 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 724 28 0 0 0 chrX 18239174 18239202 -4183625 + AT_rich Low_complexity Low_complexity 1 28 0 1 724 209 154 0 37 chrX 18239894 18239948 -4182879 + (CAT)n Simple_repeat Simple_repeat 1 52 0 1 724 27 0 0 0 chrX 18240192 18240219 -4182608 + AT_rich Low_complexity Low_complexity 1 27 0 1 724 237 65 0 0 chrX 18241433 18241464 -4181363 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 724 189 74 0 0 chrX 18241640 18241667 -4181160 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 724 213 196 0 0 chrX 18241999 18242055 -4180772 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 724 195 189 0 0 chrX 18242409 18242462 -4180365 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 724 183 42 0 0 chrX 18243478 18243502 -4179325 + (T)n Simple_repeat Simple_repeat 1 24 0 1 724 183 42 0 0 chrX 18243591 18243615 -4179212 + (GAATG)n Simple_repeat Simple_repeat 3 26 0 1 724 203 184 0 0 chrX 18244714 18244752 -4178075 + A-rich Low_complexity Low_complexity 1 38 0 1 724 294 95 0 0 chrX 18245896 18245938 -4176889 + (TGG)n Simple_repeat Simple_repeat 3 44 0 1 724 180 163 0 0 chrX 18246666 18246709 -4176118 + (TTG)n Simple_repeat Simple_repeat 1 43 0 1 724 247 189 0 0 chrX 18248048 18248101 -4174726 + GA-rich Low_complexity Low_complexity 1 53 0 1 724 198 0 0 0 chrX 18249118 18249140 -4173687 + (G)n Simple_repeat Simple_repeat 1 22 0 1 724 26 0 0 0 chrX 18249672 18249698 -4173129 + AT_rich Low_complexity Low_complexity 1 26 0 1 724 222 37 0 0 chrX 18249887 18249914 -4172913 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 724 25 51 0 0 chrX 18250524 18250563 -4172264 + AT_rich Low_complexity Low_complexity 1 39 0 1 724 2355 172 113 9 chrX 18250629 18251159 -4171668 - DNAREP1_DM LINE Penelope -9 585 1 1 724 186 242 0 0 chrX 18251912 18251978 -4170849 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 724 24 0 0 0 chrX 18254899 18254923 -4167904 + AT_rich Low_complexity Low_complexity 1 24 0 1 724 23 0 0 0 chrX 18256104 18256127 -4166700 + AT_rich Low_complexity Low_complexity 1 23 0 1 724 233 163 0 0 chrX 18256568 18256611 -4166216 + Transib-N1_DM DNA Transib 21 63 -451 1 724 462 133 0 0 chrX 18256683 18256758 -4166069 + Transib-N1_DM DNA Transib 41 115 -399 1 724 24 0 0 0 chrX 18257386 18257410 -4165417 + AT_rich Low_complexity Low_complexity 1 24 0 1 724 23 33 0 0 chrX 18257887 18257917 -4164910 + AT_rich Low_complexity Low_complexity 1 30 0 1 724 219 88 0 0 chrX 18259018 18259052 -4163775 + (T)n Simple_repeat Simple_repeat 1 34 0 1 724 239 224 25 38 chrX 18260470 18260549 -4162278 + (CGAGG)n Simple_repeat Simple_repeat 4 81 0 1 724 203 125 25 0 chrX 18260659 18260699 -4162128 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 724 24 0 0 0 chrX 18263433 18263457 -4159370 + AT_rich Low_complexity Low_complexity 1 24 0 1 724 261 0 0 0 chrX 18263581 18263610 -4159217 + (AATTG)n Simple_repeat Simple_repeat 5 33 0 1 724 255 170 0 0 chrX 18263780 18263827 -4159000 + (TATG)n Simple_repeat Simple_repeat 3 49 0 1 724 223 167 0 0 chrX 18265237 18265279 -4157548 + GA-rich Low_complexity Low_complexity 2 43 0 1 724 237 65 0 0 chrX 18265776 18265807 -4157020 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1 724 221 151 0 19 chrX 18266248 18266302 -4156525 + (CGG)n Simple_repeat Simple_repeat 2 54 0 1 724 264 264 0 0 chrX 18268554 18268626 -4154201 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 724 185 139 23 0 chrX 18268710 18268753 -4154074 + CT-rich Low_complexity Low_complexity 1 44 0 1 724 261 163 0 0 chrX 18268763 18268812 -4154015 + (TTG)n Simple_repeat Simple_repeat 2 50 0 1 724 207 69 0 0 chrX 18269178 18269207 -4153620 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 724 216 48 0 67 chrX 18269225 18269270 -4153557 + (CGAAT)n Simple_repeat Simple_repeat 3 44 0 1 724 201 243 0 0 chrX 18270183 18270220 -4152607 + (TTCCG)n Simple_repeat Simple_repeat 1 37 0 1 724 201 121 0 0 chrX 18270355 18270388 -4152439 + (CCGAA)n Simple_repeat Simple_repeat 1 33 0 1 724 336 77 0 0 chrX 18271085 18271137 -4151690 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 724 238 143 0 58 chrX 18271408 18271460 -4151367 + A-rich Low_complexity Low_complexity 4 52 0 1 724 191 103 0 25 chrX 18271794 18271834 -4150993 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 724 21 57 0 0 chrX 18271858 18271893 -4150934 + AT_rich Low_complexity Low_complexity 1 35 0 1 724 22 56 0 0 chrX 18279705 18279741 -4143086 + AT_rich Low_complexity Low_complexity 1 36 0 1 724 306 169 0 0 chrX 18281756 18281821 -4141006 + (TTA)n Simple_repeat Simple_repeat 2 66 0 1 724 22 0 0 0 chrX 18289416 18289438 -4133389 + AT_rich Low_complexity Low_complexity 1 22 0 1 724 249 108 0 0 chrX 18291241 18291278 -4131549 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1 724 261 119 0 0 chrX 18291508 18291550 -4131277 + (CTATT)n Simple_repeat Simple_repeat 3 44 0 1 724 300 27 0 0 chrX 18292040 18292077 -4130750 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 724 198 167 0 0 chrX 18293354 18293390 -4129437 + (TGGA)n Simple_repeat Simple_repeat 4 39 0 1 724 22 35 0 0 chrX 18297409 18297438 -4125389 + AT_rich Low_complexity Low_complexity 1 29 0 1 724 22 0 0 0 chrX 18299674 18299696 -4123131 + AT_rich Low_complexity Low_complexity 1 22 0 1 724 222 128 0 0 chrX 18300650 18300689 -4122138 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 724 24 0 0 0 chrX 18303171 18303195 -4119632 + AT_rich Low_complexity Low_complexity 1 24 0 1 724 50 0 0 0 chrX 18304600 18304650 -4118177 + AT_rich Low_complexity Low_complexity 1 50 0 1 724 22 0 0 0 chrX 18305453 18305475 -4117352 + AT_rich Low_complexity Low_complexity 1 22 0 1 724 23 78 0 0 chrX 18305559 18305610 -4117217 + AT_rich Low_complexity Low_complexity 1 51 0 1 724 216 158 0 0 chrX 18307131 18307188 -4115639 + (CAGAGA)n Simple_repeat Simple_repeat 6 62 0 1 724 205 156 0 0 chrX 18308313 18308345 -4114482 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 724 952 76 0 29 chrX 18308876 18309012 -4113815 - DNAREP1_DM LINE Penelope 0 594 463 1 724 673 147 68 34 chrX 18309101 18309249 -4113578 - DNAREP1_DM LINE Penelope -441 153 1 1 724 270 106 0 0 chrX 18311109 18311156 -4111671 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 724 292 253 0 0 chrX 18311358 18311437 -4111390 + A-rich Low_complexity Low_complexity 1 79 0 1 724 339 208 31 67 chrX 18312147 18312252 -4110575 + DNAREP1_DM LINE Penelope 422 515 -79 1 724 24 0 0 0 chrX 18315459 18315483 -4107344 + AT_rich Low_complexity Low_complexity 1 24 0 1 724 424 0 18 18 chrX 18315546 18315603 -4107224 + (TTA)n Simple_repeat Simple_repeat 2 58 0 1 724 209 143 16 82 chrX 18315628 18315689 -4107138 + (CATAT)n Simple_repeat Simple_repeat 4 60 0 1 724 200 284 0 0 chrX 18316296 18316363 -4106464 + T-rich Low_complexity Low_complexity 1 67 0 1 724 226 232 61 0 chrX 18316693 18316775 -4106052 + (GCTG)n Simple_repeat Simple_repeat 2 88 0 1 724 22 0 0 0 chrX 18320242 18320264 -4102563 + AT_rich Low_complexity Low_complexity 1 22 0 1 724 207 295 16 0 chrX 18320562 18320623 -4102204 + (CCG)n Simple_repeat Simple_repeat 2 63 0 1 724 183 80 0 0 chrX 18321142 18321167 -4101660 + (CGATG)n Simple_repeat Simple_repeat 5 29 0 1 724 195 85 42 21 chrX 18322288 18322336 -4100491 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 724 3042 3 0 3 chrX 18323581 18323912 -4098915 + TRANSPAC_LTR LTR Gypsy 1 330 0 1 724 41219 2 0 1 chrX 18323912 18328505 -4094322 + TRANSPAC_I LTR Gypsy 1 4590 0 1 724 3042 3 0 3 chrX 18328504 18328835 -4093992 + TRANSPAC_LTR LTR Gypsy 1 330 0 1 724 543 126 0 0 chrX 18330622 18330717 -4092110 + (CTG)n Simple_repeat Simple_repeat 1 95 0 1 724 232 167 0 0 chrX 18334225 18334273 -4088554 + (CTG)n Simple_repeat Simple_repeat 1 48 0 1 724 22 0 0 0 chrX 18335181 18335203 -4087624 + AT_rich Low_complexity Low_complexity 1 22 0 1 724 186 143 0 0 chrX 18335902 18335937 -4086890 + (TCTG)n Simple_repeat Simple_repeat 1 35 0 1 724 33 0 0 0 chrX 18336738 18336771 -4086056 + AT_rich Low_complexity Low_complexity 1 33 0 1 724 21 57 0 0 chrX 18337024 18337059 -4085768 + AT_rich Low_complexity Low_complexity 1 35 0 1 724 375 23 0 0 chrX 18337221 18337265 -4085562 + (TATG)n Simple_repeat Simple_repeat 2 45 0 1 724 234 62 0 0 chrX 18337387 18337419 -4085408 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 724 183 129 0 0 chrX 18337605 18337636 -4085191 + (TATG)n Simple_repeat Simple_repeat 4 34 0 1 724 204 40 0 0 chrX 18337732 18337757 -4085070 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 724 189 0 0 0 chrX 18337832 18337853 -4084974 + (TTCC)n Simple_repeat Simple_repeat 2 22 0 1 724 192 77 0 0 chrX 18339463 18339489 -4083338 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1 724 285 188 0 0 chrX 18339655 18339735 -4083092 + CT-rich Low_complexity Low_complexity 2 81 0 1 724 21 36 0 0 chrX 18340543 18340571 -4082256 + AT_rich Low_complexity Low_complexity 1 28 0 1 724 252 59 0 0 chrX 18345318 18345352 -4077475 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 724 226 266 21 31 chrX 18346598 18346695 -4076132 + (CCCA)n Simple_repeat Simple_repeat 2 97 0 1 725 186 43 0 0 chrX 18351371 18351394 -4071433 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 725 192 125 0 0 chrX 18352263 18352295 -4070532 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 725 317 334 0 17 chrX 18353276 18353521 -4069306 + CT-rich Low_complexity Low_complexity 1 240 0 1 725 210 274 0 14 chrX 18355067 18355141 -4067686 + GA-rich Low_complexity Low_complexity 1 73 0 1 725 255 31 0 0 chrX 18356462 18356494 -4066333 + (TCC)n Simple_repeat Simple_repeat 1 32 0 1 725 198 0 0 0 chrX 18358175 18358197 -4064630 + (TATG)n Simple_repeat Simple_repeat 2 23 0 1 725 201 39 0 0 chrX 18360100 18360126 -4062701 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 725 201 184 20 0 chrX 18360607 18360656 -4062171 + (CCA)n Simple_repeat Simple_repeat 2 51 0 1 725 221 83 28 0 chrX 18364924 18364960 -4057867 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 725 202 176 39 0 chrX 18365649 18365700 -4057127 + A-rich Low_complexity Low_complexity 1 53 0 1 725 198 118 0 0 chrX 18367224 18367258 -4055569 + (T)n Simple_repeat Simple_repeat 1 34 0 1 725 210 158 0 0 chrX 18368488 18368526 -4054301 + A-rich Low_complexity Low_complexity 1 38 0 1 725 297 51 0 0 chrX 18371260 18371299 -4051528 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 725 195 42 0 0 chrX 18372083 18372107 -4050720 + (TTAAA)n Simple_repeat Simple_repeat 3 26 0 1 725 206 143 0 20 chrX 18372521 18372571 -4050256 + (TAA)n Simple_repeat Simple_repeat 1 49 0 1 725 204 211 0 0 chrX 18373348 18373386 -4049441 + (CAGTT)n Simple_repeat Simple_repeat 5 42 0 1 725 184 95 95 0 chrX 18373943 18373985 -4048842 + (CTATA)n Simple_repeat Simple_repeat 4 49 0 1 725 22 35 0 0 chrX 18375116 18375145 -4047682 + AT_rich Low_complexity Low_complexity 1 29 0 1 725 21 0 0 0 chrX 18376886 18376907 -4045920 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 208 163 23 0 chrX 18377583 18377626 -4045201 + (CAATA)n Simple_repeat Simple_repeat 5 48 0 1 725 183 100 0 0 chrX 18377643 18377673 -4045154 + (A)n Simple_repeat Simple_repeat 1 30 0 1 725 32 43 0 0 chrX 18381437 18381483 -4041344 + AT_rich Low_complexity Low_complexity 1 46 0 1 725 240 211 0 0 chrX 18382903 18382979 -4039848 + (TAG)n Simple_repeat Simple_repeat 2 77 0 1 725 23 0 0 0 chrX 18386394 18386417 -4036410 + AT_rich Low_complexity Low_complexity 1 23 0 1 725 35 0 0 0 chrX 18387487 18387522 -4035305 + AT_rich Low_complexity Low_complexity 1 35 0 1 725 21 36 0 0 chrX 18389048 18389076 -4033751 + AT_rich Low_complexity Low_complexity 1 28 0 1 725 227 177 0 16 chrX 18389450 18389513 -4033314 + (GATTG)n Simple_repeat Simple_repeat 4 65 0 1 725 30 59 0 0 chrX 18395383 18395434 -4027393 + AT_rich Low_complexity Low_complexity 1 51 0 1 725 30 77 0 0 chrX 18395735 18395800 -4027027 + AT_rich Low_complexity Low_complexity 1 65 0 1 725 282 56 0 0 chrX 18397473 18397509 -4025318 + (CTA)n Simple_repeat Simple_repeat 1 36 0 1 725 453 151 0 0 chrX 18399005 18399091 -4023736 + (ATTCG)n Simple_repeat Simple_repeat 2 87 0 1 725 246 136 0 0 chrX 18399112 18399156 -4023671 + (ATTTG)n Simple_repeat Simple_repeat 4 47 0 1 725 216 0 0 0 chrX 18403901 18403925 -4018902 + (TTA)n Simple_repeat Simple_repeat 3 26 0 1 725 189 0 0 0 chrX 18405604 18405625 -4017202 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1 725 21 0 0 0 chrX 18406736 18406757 -4016070 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 182 91 30 0 chrX 18408745 18408778 -4014049 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 725 30 0 0 0 chrX 18409045 18409075 -4013752 + AT_rich Low_complexity Low_complexity 1 30 0 1 725 25 0 0 0 chrX 18409237 18409262 -4013565 + AT_rich Low_complexity Low_complexity 1 25 0 1 725 318 129 0 0 chrX 18411694 18411756 -4011071 + (CAA)n Simple_repeat Simple_repeat 1 62 0 1 725 189 0 0 0 chrX 18417102 18417123 -4005704 + (CATTT)n Simple_repeat Simple_repeat 2 22 0 1 725 202 244 0 0 chrX 18417161 18417206 -4005621 + (TTG)n Simple_repeat Simple_repeat 1 45 0 1 725 28 61 0 0 chrX 18417296 18417345 -4005482 + AT_rich Low_complexity Low_complexity 1 49 0 1 725 39 88 0 0 chrX 18417476 18417578 -4005249 + AT_rich Low_complexity Low_complexity 1 102 0 1 725 228 86 0 0 chrX 18417992 18418027 -4004800 + (GTGTG)n Simple_repeat Simple_repeat 4 38 0 1 725 224 59 0 29 chrX 18418691 18418726 -4004101 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 1 725 35 41 0 0 chrX 18420116 18420165 -4002662 + AT_rich Low_complexity Low_complexity 1 49 0 1 725 192 184 0 0 chrX 18425585 18425634 -3997193 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 1 725 243 0 0 0 chrX 18426839 18426866 -3995961 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 725 21 0 0 0 chrX 18427206 18427227 -3995600 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 189 74 0 0 chrX 18427909 18427936 -3994891 + (A)n Simple_repeat Simple_repeat 1 27 0 1 725 207 162 0 0 chrX 18428875 18428912 -3993915 + (CAG)n Simple_repeat Simple_repeat 1 37 0 1 725 212 167 21 0 chrX 18428960 18429008 -3993819 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 725 183 80 0 0 chrX 18429293 18429318 -3993509 + (CCGGA)n Simple_repeat Simple_repeat 4 28 0 1 725 198 0 0 0 chrX 18429329 18429351 -3993476 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 1 725 231 146 0 0 chrX 18429709 18429750 -3993077 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 725 180 111 0 0 chrX 18430866 18430893 -3991934 + (CAAGT)n Simple_repeat Simple_repeat 4 30 0 1 725 210 179 0 0 chrX 18431177 18431233 -3991594 + (CAG)n Simple_repeat Simple_repeat 3 58 0 1 725 186 43 0 0 chrX 18433067 18433090 -3989737 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 725 25 65 0 0 chrX 18434436 18434482 -3988345 + AT_rich Low_complexity Low_complexity 1 46 0 1 725 216 143 0 0 chrX 18434964 18435006 -3987821 + (CGAAT)n Simple_repeat Simple_repeat 1 42 0 1 725 237 216 0 0 chrX 18435322 18435373 -3987454 + (GAGTG)n Simple_repeat Simple_repeat 3 53 0 1 725 221 241 17 0 chrX 18435832 18435890 -3986937 + (CTG)n Simple_repeat Simple_repeat 3 61 0 1 725 213 108 0 0 chrX 18436816 18436853 -3985974 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 725 33 100 0 0 chrX 18438053 18438163 -3984664 + AT_rich Low_complexity Low_complexity 1 110 0 1 725 192 97 0 0 chrX 18439025 18439056 -3983771 + (A)n Simple_repeat Simple_repeat 1 31 0 1 725 360 0 0 0 chrX 18439712 18439752 -3983075 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 725 27 0 0 0 chrX 18439963 18439990 -3982837 + AT_rich Low_complexity Low_complexity 1 27 0 1 725 22 0 0 0 chrX 18440030 18440052 -3982775 + AT_rich Low_complexity Low_complexity 1 22 0 1 725 207 0 0 0 chrX 18440673 18440696 -3982131 + (TTC)n Simple_repeat Simple_repeat 3 25 0 1 725 22 35 0 0 chrX 18440723 18440752 -3982075 + AT_rich Low_complexity Low_complexity 1 29 0 1 725 261 262 0 16 chrX 18441291 18441353 -3981474 + (CATA)n Simple_repeat Simple_repeat 4 64 0 1 725 186 167 0 0 chrX 18441645 18441681 -3981146 + (TGG)n Simple_repeat Simple_repeat 1 36 0 1 725 189 132 0 0 chrX 18442805 18442843 -3979984 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 1 725 256 258 0 43 chrX 18445039 18445132 -3977695 + (CAG)n Simple_repeat Simple_repeat 2 90 0 1 725 186 71 0 0 chrX 18446418 18446446 -3976381 + (CGATG)n Simple_repeat Simple_repeat 5 32 0 1 725 216 196 0 0 chrX 18446817 18446863 -3975964 + T-rich Low_complexity Low_complexity 1 46 0 1 725 227 299 0 0 chrX 18446996 18447063 -3975764 + GA-rich Low_complexity Low_complexity 2 68 0 1 725 189 0 0 0 chrX 18447528 18447549 -3975278 + (CGGT)n Simple_repeat Simple_repeat 4 24 0 1 725 294 289 19 26 chrX 18448390 18448546 -3974281 + A-rich Low_complexity Low_complexity 2 156 0 1 725 335 23 23 0 chrX 18448924 18448968 -3973859 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 725 264 234 0 15 chrX 18449101 18449166 -3973661 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 725 7015 36 1 3 chrX 18449466 18450329 -3972498 + TRANSIB2 DNA Transib 1 861 -1983 1 725 5270 21 0 2 chrX 18450319 18450930 -3971897 + TRANSIB2 DNA Transib 2235 2844 0 1 725 213 121 0 0 chrX 18452461 18452494 -3970333 + (GATTG)n Simple_repeat Simple_repeat 4 36 0 1 725 183 80 0 0 chrX 18453705 18453730 -3969097 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1 725 236 224 39 26 chrX 18453992 18454070 -3968757 + (GAGTG)n Simple_repeat Simple_repeat 2 80 0 1 725 260 119 0 17 chrX 18454098 18454158 -3968669 + (GGATG)n Simple_repeat Simple_repeat 2 60 0 1 725 222 118 0 0 chrX 18454595 18454629 -3968198 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 725 255 241 0 44 chrX 18455827 18455918 -3966909 + T-rich Low_complexity Low_complexity 3 89 0 1 725 279 0 0 0 chrX 18456689 18456720 -3966107 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 725 208 227 0 0 chrX 18458039 18458083 -3964744 + (CAGT)n Simple_repeat Simple_repeat 4 47 0 1 725 29 0 0 0 chrX 18459233 18459262 -3963565 + AT_rich Low_complexity Low_complexity 1 29 0 1 725 213 94 0 0 chrX 18460785 18460817 -3962010 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 725 189 107 0 0 chrX 18460961 18460989 -3961838 + (CAA)n Simple_repeat Simple_repeat 1 28 0 1 725 212 77 0 25 chrX 18462183 18462223 -3960604 + (TTTCG)n Simple_repeat Simple_repeat 1 39 0 1 725 192 231 0 0 chrX 18463266 18463318 -3959509 + (CACCAT)n Simple_repeat Simple_repeat 3 54 0 1 725 192 152 0 0 chrX 18464903 18464936 -3957891 + (CCG)n Simple_repeat Simple_repeat 2 34 0 1 725 202 250 0 51 chrX 18464993 18465052 -3957775 + (CTGGGG)n Simple_repeat Simple_repeat 6 61 0 1 725 241 179 0 0 chrX 18465085 18465141 -3957686 + ROO_I LTR Pao 676 731 -7525 1 725 197 154 0 44 chrX 18465173 18465241 -3957586 + GA-rich Low_complexity Low_complexity 1 65 0 1 725 21 0 0 0 chrX 18465729 18465750 -3957077 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 245 241 25 12 chrX 18466743 18466823 -3956004 + A-rich Low_complexity Low_complexity 2 82 0 1 725 200 135 27 0 chrX 18468750 18468787 -3954040 + A-rich Low_complexity Low_complexity 1 38 0 1 725 294 29 0 0 chrX 18471193 18471228 -3951599 + (GGA)n Simple_repeat Simple_repeat 1 35 0 1 725 309 140 0 0 chrX 18471408 18471465 -3951362 + (CCA)n Simple_repeat Simple_repeat 1 57 0 1 725 240 274 0 14 chrX 18474710 18474784 -3948043 + (TTGG)n Simple_repeat Simple_repeat 3 75 0 1 725 253 145 16 16 chrX 18474833 18474896 -3947931 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 1 725 183 162 0 0 chrX 18475882 18475919 -3946908 + (GTTTG)n Simple_repeat Simple_repeat 3 39 0 1 725 195 139 0 0 chrX 18476065 18476101 -3946726 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1 725 297 0 0 0 chrX 18479162 18479195 -3943632 + (TTG)n Simple_repeat Simple_repeat 3 35 0 1 725 261 83 0 0 chrX 18479405 18479441 -3943386 + (TATG)n Simple_repeat Simple_repeat 1 36 0 1 726 192 40 0 0 chrX 18481160 18481185 -3941642 + (CACTC)n Simple_repeat Simple_repeat 1 25 0 1 726 186 208 0 0 chrX 18481429 18481482 -3941345 + CT-rich Low_complexity Low_complexity 2 54 0 1 726 210 128 51 0 chrX 18481627 18481666 -3941161 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 1 726 186 224 0 0 chrX 18485456 18485541 -3937286 + (CAG)n Simple_repeat Simple_repeat 1 85 0 1 726 336 148 0 0 chrX 18490722 18490783 -3932044 + (GAGTG)n Simple_repeat Simple_repeat 2 62 0 1 726 21 0 0 0 chrX 18491534 18491555 -3931272 + AT_rich Low_complexity Low_complexity 1 21 0 1 726 186 143 0 0 chrX 18492177 18492212 -3930615 + (CATCC)n Simple_repeat Simple_repeat 4 38 0 1 726 192 77 0 0 chrX 18495301 18495327 -3927500 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 726 360 167 0 0 chrX 18498205 18498277 -3924550 + (CAT)n Simple_repeat Simple_repeat 2 73 0 1 726 245 39 58 19 chrX 18498457 18498509 -3924318 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 726 21 36 0 0 chrX 18499335 18499363 -3923464 + AT_rich Low_complexity Low_complexity 1 28 0 1 726 429 280 0 49 chrX 18500783 18500967 -3921860 + T-rich Low_complexity Low_complexity 3 177 0 1 726 445 325 8 0 chrX 18500948 18501330 -3921497 + T-rich Low_complexity Low_complexity 1 385 0 1 726 480 296 0 17 chrX 18501344 18501523 -3921304 + T-rich Low_complexity Low_complexity 2 177 0 1 726 514 285 0 0 chrX 18501564 18501743 -3921084 + (TTG)n Simple_repeat Simple_repeat 1 179 0 1 726 403 300 0 0 chrX 18501789 18501949 -3920878 + (TTG)n Simple_repeat Simple_repeat 2 161 0 1 726 180 0 0 0 chrX 18502002 18502022 -3920805 + (TTG)n Simple_repeat Simple_repeat 1 20 0 1 726 215 264 0 0 chrX 18503663 18503716 -3919111 + (TCG)n Simple_repeat Simple_repeat 2 54 0 1 726 248 307 0 0 chrX 18504632 18504733 -3918094 + (TGG)n Simple_repeat Simple_repeat 2 102 0 1 726 288 200 0 0 chrX 18505361 18505446 -3917381 + (TGG)n Simple_repeat Simple_repeat 1 85 0 1 726 189 0 0 0 chrX 18507427 18507448 -3915379 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 726 25 31 0 0 chrX 18511580 18511612 -3911215 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 243 0 0 0 chrX 18512702 18512729 -3910098 + (T)n Simple_repeat Simple_repeat 1 27 0 1 726 917 90 0 60 chrX 18513781 18513947 -3908880 + DNAREP1_DM LINE Penelope 1 156 -438 1 726 1074 94 88 0 chrX 18513946 18514105 -3908722 + DNAREP1_DM LINE Penelope 422 594 0 1 726 22 35 0 0 chrX 18514439 18514468 -3908359 + AT_rich Low_complexity Low_complexity 1 29 0 1 726 208 178 22 22 chrX 18515196 18515242 -3907585 + (CCCCAA)n Simple_repeat Simple_repeat 6 51 0 1 726 204 67 0 0 chrX 18516778 18516808 -3906019 + (A)n Simple_repeat Simple_repeat 1 30 0 1 726 180 97 0 0 chrX 18517636 18517667 -3905160 + (GGA)n Simple_repeat Simple_repeat 2 32 0 1 726 27 49 0 0 chrX 18518723 18518764 -3904063 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 234 0 0 0 chrX 18521245 18521271 -3901556 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 726 276 161 0 0 chrX 18523570 18523632 -3899195 + (CAT)n Simple_repeat Simple_repeat 3 64 0 1 726 254 318 0 0 chrX 18523790 18523856 -3898971 + C-rich Low_complexity Low_complexity 5 70 0 1 726 195 69 0 0 chrX 18524185 18524214 -3898613 + (GATTG)n Simple_repeat Simple_repeat 3 31 0 1 726 262 0 0 50 chrX 18524338 18524378 -3898449 + (CAGGG)n Simple_repeat Simple_repeat 3 40 0 1 726 225 65 0 0 chrX 18524572 18524603 -3898224 + (TTCGGG)n Simple_repeat Simple_repeat 3 33 0 1 726 345 291 0 0 chrX 18527536 18527653 -3895174 + (TCTCTG)n Simple_repeat Simple_repeat 1 117 0 1 726 24 0 0 0 chrX 18527822 18527846 -3894981 + AT_rich Low_complexity Low_complexity 1 24 0 1 726 28 29 0 0 chrX 18529099 18529134 -3893693 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 337 122 0 35 chrX 18530729 18530814 -3892013 + (TTG)n Simple_repeat Simple_repeat 1 82 0 1 726 500 30 15 0 chrX 18531214 18531280 -3891547 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 726 231 61 0 0 chrX 18534832 18534865 -3887962 + (GCATG)n Simple_repeat Simple_repeat 5 37 0 1 726 207 284 0 15 chrX 18535503 18535571 -3887256 + A-rich Low_complexity Low_complexity 2 68 0 1 726 267 103 0 0 chrX 18536203 18536242 -3886585 + (CCTG)n Simple_repeat Simple_repeat 3 41 0 1 726 180 0 0 0 chrX 18536750 18536770 -3886057 + (CAATT)n Simple_repeat Simple_repeat 1 20 0 1 726 180 0 0 0 chrX 18537521 18537541 -3885286 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 726 204 238 0 0 chrX 18538117 18538159 -3884668 + (CATA)n Simple_repeat Simple_repeat 3 44 0 1 726 180 0 0 0 chrX 18538682 18538702 -3884125 + (TCCCC)n Simple_repeat Simple_repeat 1 20 0 1 726 215 61 0 29 chrX 18539519 18539553 -3883274 + (TGAG)n Simple_repeat Simple_repeat 2 34 0 1 726 22 0 0 0 chrX 18539838 18539860 -3882967 + AT_rich Low_complexity Low_complexity 1 22 0 1 726 22 0 0 0 chrX 18541155 18541177 -3881650 + AT_rich Low_complexity Low_complexity 1 22 0 1 726 23 0 0 0 chrX 18542305 18542328 -3880499 + AT_rich Low_complexity Low_complexity 1 23 0 1 726 22 94 0 0 chrX 18547230 18547294 -3875533 + AT_rich Low_complexity Low_complexity 1 64 0 1 726 36 23 0 0 chrX 18551505 18551548 -3871279 + AT_rich Low_complexity Low_complexity 1 43 0 1 726 300 247 0 0 chrX 18557947 18558028 -3864799 + (TTGG)n Simple_repeat Simple_repeat 4 84 0 1 726 37 0 0 0 chrX 18559307 18559344 -3863483 + AT_rich Low_complexity Low_complexity 1 37 0 1 726 203 262 0 0 chrX 18561267 18561328 -3861499 + T-rich Low_complexity Low_complexity 1 61 0 1 726 228 235 0 19 chrX 18561815 18561867 -3860960 + CT-rich Low_complexity Low_complexity 1 51 0 1 726 383 92 0 15 chrX 18562667 18562733 -3860094 + (GTATG)n Simple_repeat Simple_repeat 5 69 0 1 726 180 152 0 0 chrX 18562766 18562799 -3860028 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1 726 180 97 0 0 chrX 18562891 18562922 -3859905 + (T)n Simple_repeat Simple_repeat 1 31 0 1 726 235 259 0 0 chrX 18563089 18563147 -3859680 + (TTGGGG)n Simple_repeat Simple_repeat 2 59 0 1 726 258 106 0 0 chrX 18563649 18563696 -3859131 + (CGGA)n Simple_repeat Simple_repeat 3 49 0 1 726 243 157 0 0 chrX 18563811 18563862 -3858965 + (CAATC)n Simple_repeat Simple_repeat 4 54 0 1 726 219 71 0 125 chrX 18564537 18564601 -3858226 + (GTTTG)n Simple_repeat Simple_repeat 4 59 0 1 726 208 121 0 0 chrX 18564891 18564924 -3857903 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1 726 189 0 0 0 chrX 18564983 18565004 -3857823 + (TTTTTA)n Simple_repeat Simple_repeat 3 23 0 1 726 22 0 0 0 chrX 18565037 18565059 -3857768 + AT_rich Low_complexity Low_complexity 1 22 0 1 726 227 291 0 0 chrX 18565814 18565869 -3856958 + (CGGGG)n Simple_repeat Simple_repeat 4 58 0 1 726 225 65 0 0 chrX 18565926 18565957 -3856870 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 726 228 159 0 22 chrX 18567371 18567416 -3855411 + (ATGGTG)n Simple_repeat Simple_repeat 3 46 0 1 726 203 235 0 56 chrX 18567970 18568024 -3854803 + (CCGGA)n Simple_repeat Simple_repeat 2 52 0 1 726 215 135 38 19 chrX 18570467 18570520 -3852307 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 726 213 39 0 0 chrX 18570807 18570833 -3851994 + (CTG)n Simple_repeat Simple_repeat 3 28 0 1 726 396 118 0 0 chrX 18571804 18571872 -3850955 + (CTG)n Simple_repeat Simple_repeat 3 70 0 1 726 299 173 40 0 chrX 18572287 18572362 -3850465 - ROO_I LTR Pao -7524 732 655 1 726 291 28 0 0 chrX 18573699 18573735 -3849092 + (ATCG)n Simple_repeat Simple_repeat 2 37 0 1 726 282 0 32 65 chrX 18574832 18574894 -3847933 + (TATAA)n Simple_repeat Simple_repeat 5 64 0 1 726 203 152 22 0 chrX 18575768 18575814 -3847013 + (CAGAT)n Simple_repeat Simple_repeat 3 49 0 1 726 278 167 0 16 chrX 18576763 18576824 -3846003 + (TCCA)n Simple_repeat Simple_repeat 3 62 0 1 726 208 337 11 0 chrX 18577629 18577721 -3845106 + (CCCCAA)n Simple_repeat Simple_repeat 3 95 0 1 726 23 0 0 0 chrX 18582326 18582349 -3840478 + AT_rich Low_complexity Low_complexity 1 23 0 1 726 25 0 0 0 chrX 18583097 18583122 -3839705 + AT_rich Low_complexity Low_complexity 1 25 0 1 726 204 179 0 0 chrX 18585304 18585343 -3837484 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1 726 234 210 0 16 chrX 18585366 18585429 -3837398 + A-rich Low_complexity Low_complexity 4 65 0 1 726 22 80 0 0 chrX 18586606 18586656 -3836171 + AT_rich Low_complexity Low_complexity 1 50 0 1 726 24 0 0 0 chrX 18587696 18587720 -3835107 + AT_rich Low_complexity Low_complexity 1 24 0 1 726 201 195 0 0 chrX 18589777 18589818 -3833009 + CT-rich Low_complexity Low_complexity 2 42 0 1 726 260 265 0 0 chrX 18590910 18590978 -3831849 + (GAATG)n Simple_repeat Simple_repeat 5 72 0 1 726 225 0 0 0 chrX 18592194 18592219 -3830608 + (A)n Simple_repeat Simple_repeat 1 25 0 1 726 207 0 0 0 chrX 18592381 18592404 -3830423 + (CGAAT)n Simple_repeat Simple_repeat 3 25 0 1 726 368 69 52 0 chrX 18592534 18592592 -3830235 + (CACCAT)n Simple_repeat Simple_repeat 6 66 0 1 726 292 284 14 0 chrX 18593359 18593433 -3829394 + (CCCGAA)n Simple_repeat Simple_repeat 4 78 0 1 726 297 100 0 0 chrX 18594912 18594962 -3827865 + (TGG)n Simple_repeat Simple_repeat 3 52 0 1 726 399 89 0 0 chrX 18596041 18596097 -3826730 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1 726 22 0 0 0 chrX 18597466 18597488 -3825339 + AT_rich Low_complexity Low_complexity 1 22 0 1 726 42 65 0 0 chrX 18597782 18597859 -3824968 + AT_rich Low_complexity Low_complexity 1 77 0 1 726 233 207 0 0 chrX 18598839 18598897 -3823930 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 1 726 180 0 0 0 chrX 18608817 18608837 -3813990 + (GCTG)n Simple_repeat Simple_repeat 1 20 0 1 726 29 0 0 0 chrX 18609775 18609804 -3813023 + AT_rich Low_complexity Low_complexity 1 29 0 1 726 22 35 0 0 chrX 18609910 18609939 -3812888 + AT_rich Low_complexity Low_complexity 1 29 0 1 727 183 80 0 0 chrX 18612813 18612838 -3809989 + (CATA)n Simple_repeat Simple_repeat 3 27 0 1 727 180 0 0 0 chrX 18614503 18614523 -3808304 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 727 198 103 0 0 chrX 18615679 18615708 -3807119 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 727 212 122 0 24 chrX 18618507 18618549 -3804278 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 727 276 111 0 0 chrX 18624635 18624680 -3798147 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 727 192 97 0 0 chrX 18627621 18627652 -3795175 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 727 288 0 0 0 chrX 18628630 18628662 -3794165 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 727 203 200 0 0 chrX 18629515 18629550 -3793277 + A-rich Low_complexity Low_complexity 1 35 0 1 727 216 67 0 0 chrX 18635104 18635134 -3787693 + (CATCC)n Simple_repeat Simple_repeat 3 32 0 1 727 213 65 0 0 chrX 18635373 18635404 -3787423 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 727 276 30 0 0 chrX 18637840 18637873 -3784954 + (TGGA)n Simple_repeat Simple_repeat 3 35 0 1 727 22 0 0 0 chrX 18639838 18639860 -3782967 + AT_rich Low_complexity Low_complexity 1 22 0 1 727 189 0 0 0 chrX 18642825 18642846 -3779981 + (T)n Simple_repeat Simple_repeat 1 21 0 1 727 189 74 0 0 chrX 18643356 18643383 -3779444 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 1 727 24 32 0 0 chrX 18644887 18644918 -3777909 + AT_rich Low_complexity Low_complexity 1 31 0 1 727 30 0 0 0 chrX 18647557 18647587 -3775240 + AT_rich Low_complexity Low_complexity 1 30 0 1 727 21 36 0 0 chrX 18647697 18647725 -3775102 + AT_rich Low_complexity Low_complexity 1 28 0 1 727 186 150 0 0 chrX 18648190 18648230 -3774597 + (T)n Simple_repeat Simple_repeat 1 40 0 1 727 25 31 0 0 chrX 18648294 18648326 -3774501 + AT_rich Low_complexity Low_complexity 1 32 0 1 727 192 77 0 0 chrX 18648399 18648425 -3774402 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 727 3523 10 7 10 chrX 18648425 18648839 -3773988 + DM297_LTR LTR Gypsy 2 414 0 1 727 11996 12 2 1 chrX 18648839 18650414 -3772413 + DM297_I LTR Gypsy 1 1402 -4765 1 727 5828 9 0 0 chrX 18650412 18651083 -3771744 + DM297_I LTR Gypsy 1499 2169 -3998 1 727 4544 15 0 4 chrX 18651064 18651617 -3771210 + DM297_I LTR Gypsy 5617 6167 0 1 727 3532 10 7 10 chrX 18651617 18652032 -3770795 + DM297_LTR LTR Gypsy 1 414 0 1 727 28 29 0 0 chrX 18652357 18652392 -3770435 + AT_rich Low_complexity Low_complexity 1 35 0 1 727 261 197 0 0 chrX 18652537 18652598 -3770229 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 727 22 0 0 0 chrX 18653508 18653530 -3769297 + AT_rich Low_complexity Low_complexity 1 22 0 1 727 27 0 0 0 chrX 18656903 18656930 -3765897 + AT_rich Low_complexity Low_complexity 1 27 0 1 727 189 0 0 0 chrX 18657116 18657137 -3765690 + (T)n Simple_repeat Simple_repeat 1 21 0 1 727 192 143 0 0 chrX 18657209 18657251 -3765576 + (CCGAG)n Simple_repeat Simple_repeat 2 43 0 1 727 201 147 0 0 chrX 18658251 18658285 -3764542 + (CCCGAA)n Simple_repeat Simple_repeat 6 39 0 1 727 264 100 0 0 chrX 18662215 18662255 -3760572 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 727 261 83 0 0 chrX 18664720 18664756 -3758071 + (A)n Simple_repeat Simple_repeat 1 36 0 1 727 204 125 0 0 chrX 18671259 18671291 -3751536 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 1 727 189 132 0 0 chrX 18671397 18671435 -3751392 + (T)n Simple_repeat Simple_repeat 1 38 0 1 727 207 299 0 0 chrX 18673552 18673629 -3749198 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 1 727 23 54 0 0 chrX 18675300 18675337 -3747490 + AT_rich Low_complexity Low_complexity 1 37 0 1 727 238 268 0 0 chrX 18676268 18676324 -3746503 + (CACCAT)n Simple_repeat Simple_repeat 4 59 0 1 727 6699 144 118 2 chrX 18677912 18679081 -3743746 - DMRT1B LINE R1 -110 5073 3769 1 727 4457 155 35 8 chrX 18679061 18679821 -3743006 - DMRT1B LINE R1 -3712 1471 691 1 727 23 54 0 0 chrX 18680151 18680188 -3742639 + AT_rich Low_complexity Low_complexity 1 37 0 1 727 192 245 0 0 chrX 18680953 18681006 -3741821 + (CACCAT)n Simple_repeat Simple_repeat 4 56 0 1 727 189 0 0 0 chrX 18682576 18682597 -3740230 + (CAA)n Simple_repeat Simple_repeat 3 23 0 1 727 250 184 39 26 chrX 18682959 18683037 -3739790 + ROO_I LTR Pao 634 712 -7544 1 727 24 53 0 0 chrX 18688600 18688638 -3734189 + AT_rich Low_complexity Low_complexity 1 38 0 1 727 232 192 38 25 chrX 18688863 18688943 -3733884 + (TGG)n Simple_repeat Simple_repeat 3 83 0 1 727 25 0 0 0 chrX 18691554 18691579 -3731248 + AT_rich Low_complexity Low_complexity 1 25 0 1 727 276 30 0 0 chrX 18691609 18691642 -3731185 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 727 271 121 0 33 chrX 18691831 18691891 -3730936 + (CAG)n Simple_repeat Simple_repeat 3 60 0 1 727 204 158 0 0 chrX 18694126 18694164 -3728663 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 727 186 191 0 0 chrX 18696985 18697032 -3725795 + (CCCCAG)n Simple_repeat Simple_repeat 4 50 0 1 727 26 0 0 0 chrX 18699992 18700018 -3722809 + AT_rich Low_complexity Low_complexity 1 26 0 1 727 22 0 0 0 chrX 18700303 18700325 -3722502 + AT_rich Low_complexity Low_complexity 1 22 0 1 727 1468 114 82 15 chrX 18706481 18706909 -3715918 - DNAREP1_DM LINE Penelope -3 591 1 1 727 186 103 0 0 chrX 18708189 18708218 -3714609 + (TATG)n Simple_repeat Simple_repeat 2 30 0 1 727 240 219 27 14 chrX 18708404 18708478 -3714349 - ROO_I LTR Pao -7518 738 664 1 727 270 0 0 0 chrX 18708635 18708665 -3714162 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 727 238 26 51 0 chrX 18710757 18710796 -3712031 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 727 297 151 0 0 chrX 18711767 18711820 -3711007 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 727 240 35 0 0 chrX 18720372 18720401 -3702426 + (TTCTCC)n Simple_repeat Simple_repeat 2 30 0 1 727 660 87 0 0 chrX 18721082 18721174 -3701653 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 727 240 169 0 58 chrX 18722764 18722833 -3699994 + A-rich Low_complexity Low_complexity 2 66 0 1 727 22 0 0 0 chrX 18726434 18726456 -3696371 + AT_rich Low_complexity Low_complexity 1 22 0 1 727 213 156 0 22 chrX 18727230 18727276 -3695551 + A-rich Low_complexity Low_complexity 4 48 0 1 727 28 0 0 0 chrX 18727582 18727610 -3695217 + AT_rich Low_complexity Low_complexity 1 28 0 1 727 21 0 0 0 chrX 18728252 18728273 -3694554 + GC_rich Low_complexity Low_complexity 1 21 0 1 727 192 40 0 0 chrX 18728903 18728928 -3693899 + (CAA)n Simple_repeat Simple_repeat 1 25 0 1 727 206 245 0 19 chrX 18730386 18730440 -3692387 + (TATG)n Simple_repeat Simple_repeat 4 56 0 1 727 189 0 0 0 chrX 18730494 18730515 -3692312 + (GAA)n Simple_repeat Simple_repeat 1 21 0 1 727 21 36 0 0 chrX 18731765 18731793 -3691034 + AT_rich Low_complexity Low_complexity 1 28 0 1 727 208 200 0 44 chrX 18732783 18732851 -3689976 + (CCCCAA)n Simple_repeat Simple_repeat 4 68 0 1 727 24 0 0 0 chrX 18732973 18732997 -3689830 + AT_rich Low_complexity Low_complexity 1 24 0 1 727 26 0 0 0 chrX 18733055 18733081 -3689746 + AT_rich Low_complexity Low_complexity 1 26 0 1 727 21 0 0 0 chrX 18733750 18733771 -3689056 + AT_rich Low_complexity Low_complexity 1 21 0 1 727 228 67 0 0 chrX 18735219 18735249 -3687578 + (GTCTG)n Simple_repeat Simple_repeat 5 34 0 1 727 26 50 0 0 chrX 18735960 18736000 -3686827 + AT_rich Low_complexity Low_complexity 1 40 0 1 727 299 152 0 0 chrX 18737063 18737109 -3685718 + DNAREP1_DM LINE Penelope 3 48 -546 1 727 577 118 81 66 chrX 18737122 18737258 -3685569 + DNAREP1_DM LINE Penelope 100 237 -357 1 727 898 81 176 0 chrX 18737261 18737397 -3685430 + DNAREP1_DM LINE Penelope 435 594 0 1 728 266 194 20 51 chrX 18743981 18744079 -3678748 + GA-rich Low_complexity Low_complexity 3 97 0 1 728 276 53 0 0 chrX 18744385 18744423 -3678404 + (GGA)n Simple_repeat Simple_repeat 1 38 0 1 728 204 159 22 22 chrX 18748765 18748810 -3674017 + (CAG)n Simple_repeat Simple_repeat 1 45 0 1 728 189 175 0 0 chrX 18749268 18749308 -3673519 + (CAG)n Simple_repeat Simple_repeat 3 42 0 1 728 23 33 0 0 chrX 18750734 18750764 -3672063 + AT_rich Low_complexity Low_complexity 1 30 0 1 728 23 54 0 0 chrX 18752052 18752089 -3670738 + AT_rich Low_complexity Low_complexity 1 37 0 1 728 21 82 0 0 chrX 18755638 18755687 -3667140 + AT_rich Low_complexity Low_complexity 1 49 0 1 728 182 37 37 0 chrX 18755927 18755954 -3666873 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 728 259 216 27 13 chrX 18758214 18758289 -3664538 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 728 273 187 0 0 chrX 18758604 18758679 -3664148 + (CAA)n Simple_repeat Simple_repeat 1 75 0 1 728 231 331 25 19 chrX 18759290 18759450 -3663377 + (CGG)n Simple_repeat Simple_repeat 3 163 0 1 728 183 42 0 0 chrX 18761407 18761431 -3661396 + (CGA)n Simple_repeat Simple_repeat 2 25 0 1 728 25 0 0 0 chrX 18762824 18762849 -3659978 + AT_rich Low_complexity Low_complexity 1 25 0 1 728 180 111 0 0 chrX 18763316 18763343 -3659484 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 728 190 75 24 48 chrX 18764426 18764468 -3658359 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1 728 266 274 0 0 chrX 18769682 18769755 -3653072 + (TGG)n Simple_repeat Simple_repeat 3 75 0 1 728 249 137 16 157 chrX 18770485 18770606 -3652221 + ROO_I LTR Pao 631 734 -7522 1 728 188 212 0 29 chrX 18770887 18770989 -3651838 + (CAG)n Simple_repeat Simple_repeat 1 99 0 1 728 236 330 27 9 chrX 18772182 18772292 -3650535 + (CAG)n Simple_repeat Simple_repeat 1 112 0 1 728 334 250 0 0 chrX 18772303 18772391 -3650436 + ROO_I LTR Pao 656 743 -7513 1 728 277 196 10 71 chrX 18772483 18772582 -3650245 + ROO_I LTR Pao 651 743 -7513 1 728 205 200 0 18 chrX 18772584 18772640 -3650187 + (CAG)n Simple_repeat Simple_repeat 1 55 0 1 728 286 250 0 0 chrX 18772838 18772914 -3649913 + C-rich Low_complexity Low_complexity 5 80 0 1 728 250 267 0 0 chrX 18773174 18773249 -3649578 + (CTG)n Simple_repeat Simple_repeat 2 76 0 1 728 273 57 0 0 chrX 18774206 18774241 -3648586 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 728 22 56 0 0 chrX 18774419 18774455 -3648372 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 185 140 0 23 chrX 18774622 18774666 -3648161 + A-rich Low_complexity Low_complexity 2 44 0 1 728 192 135 0 0 chrX 18774865 18774902 -3647925 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 1 728 360 103 0 0 chrX 18776341 18776399 -3646428 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 728 36 0 0 0 chrX 18776754 18776790 -3646037 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 240 86 0 0 chrX 18776923 18776958 -3645869 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 728 22 0 0 0 chrX 18777070 18777092 -3645735 + AT_rich Low_complexity Low_complexity 1 22 0 1 728 21 0 0 0 chrX 18777297 18777318 -3645509 + AT_rich Low_complexity Low_complexity 1 21 0 1 728 307 253 0 0 chrX 18778077 18778168 -3644659 + A-rich Low_complexity Low_complexity 1 91 0 1 728 22 0 0 0 chrX 18778605 18778627 -3644200 + AT_rich Low_complexity Low_complexity 1 22 0 1 728 29 28 0 0 chrX 18781619 18781655 -3641172 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 236 266 0 15 chrX 18782219 18782284 -3640543 + GA-rich Low_complexity Low_complexity 2 65 0 1 728 72 46 0 23 chrX 18787810 18787943 -3634884 + AT_rich Low_complexity Low_complexity 1 130 0 1 728 1234 104 216 5 chrX 18788049 18788262 -3634565 - DNAREP1_DM LINE Penelope 0 594 337 1 728 536 138 9 60 chrX 18788262 18788378 -3634449 - DNAREP1_DM LINE Penelope -461 133 24 1 728 254 161 0 35 chrX 18790233 18790291 -3632536 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 1 728 747 116 0 34 chrX 18790302 18790480 -3632347 + (CATATA)n Simple_repeat Simple_repeat 3 174 0 1 728 211 189 38 0 chrX 18794811 18794864 -3627963 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 1 728 219 36 0 0 chrX 18795770 18795798 -3627029 + (CCAA)n Simple_repeat Simple_repeat 3 30 0 1 728 294 87 0 0 chrX 18796607 18796653 -3626174 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 728 36 23 0 0 chrX 18796986 18797029 -3625798 + AT_rich Low_complexity Low_complexity 1 43 0 1 728 31 0 0 0 chrX 18797347 18797378 -3625449 + AT_rich Low_complexity Low_complexity 1 31 0 1 728 22 56 0 0 chrX 18798517 18798553 -3624274 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 258 32 0 0 chrX 18799630 18799661 -3623166 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 728 27 29 0 0 chrX 18800511 18800545 -3622282 + AT_rich Low_complexity Low_complexity 1 34 0 1 728 22 35 0 0 chrX 18801486 18801515 -3621312 + AT_rich Low_complexity Low_complexity 1 29 0 1 728 216 143 20 20 chrX 18802226 18802276 -3620551 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 728 330 26 0 0 chrX 18803867 18803906 -3618921 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 728 206 121 0 0 chrX 18804064 18804097 -3618730 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1 728 26 30 0 0 chrX 18806280 18806313 -3616514 + AT_rich Low_complexity Low_complexity 1 33 0 1 728 24 32 0 0 chrX 18806356 18806387 -3616440 + AT_rich Low_complexity Low_complexity 1 31 0 1 728 225 94 0 0 chrX 18807343 18807375 -3615452 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 728 21 0 0 0 chrX 18808282 18808303 -3614524 + AT_rich Low_complexity Low_complexity 1 21 0 1 728 24 53 0 0 chrX 18808723 18808761 -3614066 + AT_rich Low_complexity Low_complexity 1 38 0 1 728 180 0 0 0 chrX 18811477 18811497 -3611330 + (CAG)n Simple_repeat Simple_repeat 1 20 0 1 728 236 247 0 25 chrX 18812041 18812120 -3610707 + A-rich Low_complexity Low_complexity 6 82 0 1 728 24 0 0 0 chrX 18812618 18812642 -3610185 + AT_rich Low_complexity Low_complexity 1 24 0 1 728 22 0 0 0 chrX 18812679 18812701 -3610126 + AT_rich Low_complexity Low_complexity 1 22 0 1 728 200 227 0 11 chrX 18813393 18813482 -3609345 + (ATG)n Simple_repeat Simple_repeat 1 88 0 1 728 21 36 0 0 chrX 18813775 18813803 -3609024 + AT_rich Low_complexity Low_complexity 1 28 0 1 728 24 32 0 0 chrX 18814439 18814470 -3608357 + AT_rich Low_complexity Low_complexity 1 31 0 1 728 215 103 0 25 chrX 18818682 18818722 -3604105 + (AAGTG)n Simple_repeat Simple_repeat 5 43 0 1 728 201 39 0 0 chrX 18819374 18819400 -3603427 + (A)n Simple_repeat Simple_repeat 1 26 0 1 728 228 67 0 0 chrX 18820233 18820263 -3602564 + (CAG)n Simple_repeat Simple_repeat 3 32 0 1 728 244 161 0 75 chrX 18820317 18820384 -3602443 + A-rich Low_complexity Low_complexity 3 64 0 1 728 180 0 0 0 chrX 18820792 18820812 -3602015 + (CTATG)n Simple_repeat Simple_repeat 5 24 0 1 728 40 37 0 0 chrX 18821684 18821738 -3601089 + AT_rich Low_complexity Low_complexity 1 54 0 1 728 27 49 0 0 chrX 18822920 18822961 -3599866 + AT_rich Low_complexity Low_complexity 1 41 0 1 728 207 253 34 22 chrX 18823091 18823180 -3599647 + T-rich Low_complexity Low_complexity 6 95 0 1 728 204 40 0 0 chrX 18826595 18826620 -3596207 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 1 728 238 174 17 76 chrX 18826821 18826939 -3595888 + T-rich Low_complexity Low_complexity 4 114 0 1 728 210 91 0 0 chrX 18827636 18827669 -3595158 + (A)n Simple_repeat Simple_repeat 1 33 0 1 728 218 208 0 0 chrX 18828718 18828766 -3594061 + A-rich Low_complexity Low_complexity 1 48 0 1 728 297 0 0 0 chrX 18829126 18829159 -3593668 + (A)n Simple_repeat Simple_repeat 1 33 0 1 728 255 191 0 0 chrX 18829397 18829465 -3593362 + T-rich Low_complexity Low_complexity 1 68 0 1 728 201 172 33 49 chrX 18830357 18830418 -3592409 + (TTTAA)n Simple_repeat Simple_repeat 1 60 0 1 728 186 43 0 0 chrX 18832584 18832607 -3590220 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 728 281 68 23 0 chrX 18833030 18833074 -3589753 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 728 300 91 0 0 chrX 18833645 18833689 -3589138 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 728 186 150 0 0 chrX 18835199 18835239 -3587588 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 728 200 217 0 0 chrX 18835281 18835327 -3587500 + T-rich Low_complexity Low_complexity 1 46 0 1 728 195 42 0 0 chrX 18835434 18835458 -3587369 + (CGGTG)n Simple_repeat Simple_repeat 1 24 0 1 728 27 0 0 0 chrX 18835763 18835790 -3587037 + AT_rich Low_complexity Low_complexity 1 27 0 1 728 256 214 0 18 chrX 18836085 18836142 -3586685 + (CAA)n Simple_repeat Simple_repeat 3 58 0 1 728 219 146 0 0 chrX 18837019 18837060 -3585767 + (T)n Simple_repeat Simple_repeat 1 41 0 1 728 216 179 0 0 chrX 18840480 18840519 -3582308 + A-rich Low_complexity Low_complexity 3 41 0 1 728 25 75 0 0 chrX 18840594 18840647 -3582180 + AT_rich Low_complexity Low_complexity 1 53 0 1 728 192 125 0 0 chrX 18840831 18840863 -3581964 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 728 209 159 23 0 chrX 18842797 18842841 -3579986 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 728 372 22 0 0 chrX 18844575 18844620 -3578207 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 728 26 30 0 0 chrX 18846327 18846360 -3576467 + AT_rich Low_complexity Low_complexity 1 33 0 1 728 23 0 0 0 chrX 18846414 18846437 -3576390 + AT_rich Low_complexity Low_complexity 1 23 0 1 728 23 54 0 0 chrX 18846661 18846698 -3576129 + AT_rich Low_complexity Low_complexity 1 37 0 1 728 26 93 0 0 chrX 18847439 18847514 -3575313 + AT_rich Low_complexity Low_complexity 1 75 0 1 728 21 0 0 0 chrX 18848286 18848307 -3574520 + AT_rich Low_complexity Low_complexity 1 21 0 1 728 219 69 0 0 chrX 18848836 18848865 -3573962 + (TATG)n Simple_repeat Simple_repeat 3 31 0 1 728 182 108 54 0 chrX 18849515 18849552 -3573275 + (TATATG)n Simple_repeat Simple_repeat 1 39 0 1 728 25 0 0 0 chrX 18849990 18850015 -3572812 + AT_rich Low_complexity Low_complexity 1 25 0 1 728 224 115 0 55 chrX 18850970 18851025 -3571802 + T-rich Low_complexity Low_complexity 1 52 0 1 728 3766 0 0 0 chrX 18851157 18851585 -3571242 - ROO_LTR LTR Pao 0 428 1 1 728 6827 2 1 0 chrX 18851585 18852402 -3570425 - ROO_I LTR Pao 0 8256 7439 1 728 59135 1 1 0 chrX 18852397 18859334 -3563493 - ROO_I LTR Pao -1310 6946 1 1 728 3766 0 0 0 chrX 18859334 18859762 -3563065 - ROO_LTR LTR Pao 0 428 1 1 728 369 43 0 0 chrX 18860960 18861007 -3561820 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 728 207 0 0 0 chrX 18862352 18862375 -3560452 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 728 252 188 0 0 chrX 18865178 18865247 -3557580 + T-rich Low_complexity Low_complexity 1 69 0 1 728 21 0 0 0 chrX 18865470 18865491 -3557336 + AT_rich Low_complexity Low_complexity 1 21 0 1 728 186 43 0 0 chrX 18865565 18865588 -3557239 + (A)n Simple_repeat Simple_repeat 1 23 0 1 728 228 135 0 0 chrX 18866531 18866568 -3556259 + (AAATG)n Simple_repeat Simple_repeat 2 38 0 1 728 288 161 0 0 chrX 18866823 18866885 -3555942 + (CAG)n Simple_repeat Simple_repeat 3 64 0 1 728 231 170 0 0 chrX 18868532 18868579 -3554248 + (TTCGG)n Simple_repeat Simple_repeat 3 49 0 1 728 183 80 0 0 chrX 18869630 18869655 -3553172 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 728 198 118 0 0 chrX 18870368 18870402 -3552425 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 728 216 163 0 0 chrX 18872055 18872098 -3550729 + (TCG)n Simple_repeat Simple_repeat 3 45 0 1 728 213 159 0 0 chrX 18872369 18872413 -3550414 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 728 219 238 0 0 chrX 18873920 18873962 -3548865 + (CATA)n Simple_repeat Simple_repeat 2 43 0 1 728 22 0 0 0 chrX 18874161 18874183 -3548644 + AT_rich Low_complexity Low_complexity 1 22 0 1 729 209 269 0 0 chrX 18876433 18876500 -3546327 + (CAA)n Simple_repeat Simple_repeat 1 67 0 1 729 208 143 0 0 chrX 18876963 18876998 -3545829 + (A)n Simple_repeat Simple_repeat 1 35 0 1 729 225 0 0 0 chrX 18877524 18877549 -3545278 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 729 204 67 0 0 chrX 18878478 18878508 -3544319 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 729 203 61 0 29 chrX 18878773 18878807 -3544020 + (GAGTG)n Simple_repeat Simple_repeat 2 34 0 1 729 276 100 0 0 chrX 18880430 18880470 -3542357 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 729 183 156 0 0 chrX 18882840 18882872 -3539955 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 729 21 0 0 0 chrX 18883959 18883980 -3538847 + AT_rich Low_complexity Low_complexity 1 21 0 1 729 21 36 0 0 chrX 18884313 18884341 -3538486 + AT_rich Low_complexity Low_complexity 1 28 0 1 729 348 24 0 0 chrX 18886218 18886259 -3536568 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1 729 414 57 0 0 chrX 18888519 18888572 -3534255 + (ATG)n Simple_repeat Simple_repeat 3 55 0 1 729 24 0 0 0 chrX 18889485 18889509 -3533318 + AT_rich Low_complexity Low_complexity 1 24 0 1 729 215 209 0 0 chrX 18894225 18894268 -3528559 + (CCGAA)n Simple_repeat Simple_repeat 3 45 0 1 729 29 0 0 0 chrX 18895530 18895559 -3527268 + AT_rich Low_complexity Low_complexity 1 29 0 1 729 279 133 0 0 chrX 18895633 18895678 -3527149 + (CACCAT)n Simple_repeat Simple_repeat 2 46 0 1 729 21 0 0 0 chrX 18895952 18895973 -3526854 + AT_rich Low_complexity Low_complexity 1 21 0 1 729 270 81 0 0 chrX 18897497 18897534 -3525293 + (T)n Simple_repeat Simple_repeat 1 37 0 1 729 231 125 0 0 chrX 18898245 18898285 -3524542 + (A)n Simple_repeat Simple_repeat 1 40 0 1 729 233 247 0 24 chrX 18900496 18900579 -3522248 + (TTG)n Simple_repeat Simple_repeat 1 81 0 1 729 21 0 0 0 chrX 18900822 18900843 -3521984 + AT_rich Low_complexity Low_complexity 1 21 0 1 729 207 146 0 0 chrX 18902181 18902222 -3520605 + (A)n Simple_repeat Simple_repeat 1 41 0 1 729 207 325 0 0 chrX 18902903 18902986 -3519841 + A-rich Low_complexity Low_complexity 1 83 0 1 729 389 95 16 0 chrX 18904091 18904154 -3518673 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 729 198 171 0 0 chrX 18907081 18907122 -3515705 + (TGG)n Simple_repeat Simple_repeat 2 42 0 1 729 31 44 0 0 chrX 18907446 18907491 -3515336 + AT_rich Low_complexity Low_complexity 1 45 0 1 729 183 80 0 0 chrX 18910257 18910282 -3512545 + (T)n Simple_repeat Simple_repeat 1 25 0 1 729 204 40 0 0 chrX 18910407 18910432 -3512395 + (T)n Simple_repeat Simple_repeat 1 25 0 1 729 234 229 0 0 chrX 18912001 18912071 -3510756 + (CGGA)n Simple_repeat Simple_repeat 4 73 0 1 729 218 209 0 0 chrX 18914429 18914472 -3508355 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1 729 285 151 0 0 chrX 18915226 18915279 -3507548 + (TTTCG)n Simple_repeat Simple_repeat 3 55 0 1 729 224 59 29 0 chrX 18915363 18915397 -3507430 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 729 201 259 0 0 chrX 18916653 18916711 -3506116 + T-rich Low_complexity Low_complexity 2 59 0 1 729 209 213 0 0 chrX 18917238 18917285 -3505542 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 1 729 198 0 0 0 chrX 18918120 18918142 -3504685 + (CCGAA)n Simple_repeat Simple_repeat 5 26 0 1 729 420 135 0 0 chrX 18919888 18919962 -3502865 + (GGA)n Simple_repeat Simple_repeat 3 76 0 1 729 21 57 0 0 chrX 18920443 18920478 -3502349 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 189 178 0 0 chrX 18920585 18920630 -3502197 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 729 31 58 0 0 chrX 18920771 18920823 -3502004 + AT_rich Low_complexity Low_complexity 1 52 0 1 729 23 54 0 0 chrX 18920872 18920909 -3501918 + AT_rich Low_complexity Low_complexity 1 37 0 1 729 200 219 0 0 chrX 18921014 18921055 -3501772 + A-rich Low_complexity Low_complexity 1 41 0 1 729 24 32 0 0 chrX 18922993 18923024 -3499803 + AT_rich Low_complexity Low_complexity 1 31 0 1 729 189 74 0 0 chrX 18925813 18925840 -3496987 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 729 1326 82 216 76 chrX 18929157 18929448 -3493379 + DMRP1 Unknown Unknown 5 336 -10 1 729 23 33 0 0 chrX 18931415 18931445 -3491382 + AT_rich Low_complexity Low_complexity 1 30 0 1 729 201 147 0 0 chrX 18931695 18931729 -3491098 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 729 180 97 0 0 chrX 18931942 18931973 -3490854 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 729 183 139 0 0 chrX 18933154 18933190 -3489637 + (A)n Simple_repeat Simple_repeat 1 36 0 1 729 201 174 22 0 chrX 18933677 18933723 -3489104 + C-rich Low_complexity Low_complexity 5 51 0 1 729 24 32 0 0 chrX 18933931 18933962 -3488865 + AT_rich Low_complexity Low_complexity 1 31 0 1 729 240 130 0 80 chrX 18934683 18934733 -3488094 + G-rich Low_complexity Low_complexity 3 48 0 1 729 206 240 20 0 chrX 18935765 18935815 -3487012 + (TGGA)n Simple_repeat Simple_repeat 3 53 0 1 729 237 234 0 15 chrX 18936482 18936547 -3486280 + (CAGAA)n Simple_repeat Simple_repeat 4 67 0 1 729 183 114 0 0 chrX 18940460 18940495 -3482332 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 729 420 105 172 40 chrX 18940773 18940872 -3481955 - BARI1 DNA Tc1 -1612 138 27 1 729 24 0 0 0 chrX 18940873 18940897 -3481930 + AT_rich Low_complexity Low_complexity 1 24 0 1 729 191 83 83 0 chrX 18941440 18941476 -3481351 + (AGATG)n Simple_repeat Simple_repeat 1 39 0 1 729 221 128 21 0 chrX 18943545 18943592 -3479235 + (TTTTA)n Simple_repeat Simple_repeat 3 50 0 1 729 21 82 0 0 chrX 18948115 18948164 -3474663 + AT_rich Low_complexity Low_complexity 1 49 0 1 729 264 120 0 0 chrX 18950049 18950099 -3472728 + (CCCA)n Simple_repeat Simple_repeat 2 51 0 1 729 43637 0 0 0 chrX 18954501 18959219 -3463608 - DOC LINE Jockey 0 4725 9 1 729 198 0 0 0 chrX 18961801 18961823 -3461004 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 1 729 227 295 13 0 chrX 18965068 18965146 -3457681 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 729 186 43 0 0 chrX 18966798 18966821 -3456006 + (T)n Simple_repeat Simple_repeat 1 23 0 1 729 198 0 0 0 chrX 18967397 18967419 -3455408 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 729 27 0 0 0 chrX 18971394 18971421 -3451406 + AT_rich Low_complexity Low_complexity 1 27 0 1 729 225 132 0 0 chrX 18975006 18975044 -3447783 + (ATGGTG)n Simple_repeat Simple_repeat 4 41 0 1 729 204 246 0 0 chrX 18976047 18976116 -3446711 + (CGG)n Simple_repeat Simple_repeat 2 70 0 1 729 335 344 0 19 chrX 18976155 18976315 -3446512 + (CGG)n Simple_repeat Simple_repeat 2 158 0 1 729 183 42 0 0 chrX 18978513 18978537 -3444290 + (TAAAAA)n Simple_repeat Simple_repeat 4 27 0 1 729 207 69 0 0 chrX 18979082 18979111 -3443716 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 729 186 133 0 0 chrX 18980167 18980197 -3442630 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 1 729 209 209 0 0 chrX 18980969 18981012 -3441815 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 1 729 25 0 0 0 chrX 18982019 18982044 -3440783 + AT_rich Low_complexity Low_complexity 1 25 0 1 729 228 304 0 65 chrX 18982309 18982432 -3440395 + ROO_I LTR Pao 618 732 -7524 1 729 231 235 0 105 chrX 18983677 18983753 -3439074 - BS LINE Jockey -2990 2136 2069 1 729 199 71 48 0 chrX 18984054 18984096 -3438731 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 729 25 0 0 0 chrX 18984133 18984158 -3438669 + AT_rich Low_complexity Low_complexity 1 25 0 1 729 22 35 0 0 chrX 18985201 18985230 -3437597 + AT_rich Low_complexity Low_complexity 1 29 0 1 729 180 0 0 0 chrX 18985952 18985972 -3436855 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 729 204 217 0 0 chrX 18988139 18988185 -3434642 + (ATG)n Simple_repeat Simple_repeat 3 48 0 1 729 233 224 0 0 chrX 18989139 18989188 -3433639 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 729 27 0 0 0 chrX 18990762 18990789 -3432038 + AT_rich Low_complexity Low_complexity 1 27 0 1 729 192 40 0 0 chrX 18994035 18994060 -3428767 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 729 243 103 0 0 chrX 18994301 18994340 -3428487 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 729 333 82 0 0 chrX 18994824 18994873 -3427954 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 729 255 79 0 0 chrX 18995580 18995618 -3427209 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 729 231 125 0 0 chrX 18996388 18996428 -3426399 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 729 243 103 0 0 chrX 18996567 18996606 -3426221 + (T)n Simple_repeat Simple_repeat 1 39 0 1 729 234 62 0 0 chrX 18998027 18998059 -3424768 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 729 195 129 0 0 chrX 18998240 18998271 -3424556 + (TATG)n Simple_repeat Simple_repeat 4 34 0 1 729 24 32 0 0 chrX 18998405 18998436 -3424391 + AT_rich Low_complexity Low_complexity 1 31 0 1 729 206 254 0 35 chrX 18998631 18998688 -3424139 + C-rich Low_complexity Low_complexity 4 58 0 1 729 297 0 0 0 chrX 19001314 19001347 -3421480 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 729 3176 120 62 2 chrX 19001850 19002351 -3420476 - Invader3_I LTR Gypsy -1323 3565 3035 1 729 2077 133 125 0 chrX 19002365 19002741 -3420086 - Invader3_I LTR Gypsy -2087 2801 2379 1 729 689 281 136 7 chrX 19002755 19003027 -3419800 - Invader3_I LTR Gypsy -4460 428 122 1 729 28 29 0 0 chrX 19003187 19003222 -3419605 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 206 180 0 16 chrX 19005142 19005204 -3417623 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 730 207 162 0 0 chrX 19005784 19005821 -3417006 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 730 29 78 0 0 chrX 19008227 19008291 -3414536 + AT_rich Low_complexity Low_complexity 1 64 0 1 730 342 0 0 0 chrX 19011167 19011205 -3411622 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 730 273 109 0 0 chrX 19012461 19012507 -3410320 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 730 276 188 0 0 chrX 19014256 19014325 -3408502 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 730 226 276 13 0 chrX 19014325 19014401 -3408426 + ROO_I LTR Pao 676 752 -7504 1 730 273 29 0 0 chrX 19014448 19014482 -3408345 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 730 218 190 0 23 chrX 19014896 19014939 -3407888 + (CAG)n Simple_repeat Simple_repeat 1 42 0 1 730 239 292 0 11 chrX 19015656 19015746 -3407081 + (TG)n Simple_repeat Simple_repeat 2 90 0 1 730 210 37 0 0 chrX 19015877 19015904 -3406923 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 730 1684 110 158 3 chrX 19015984 19016275 -3406552 + DNAREP1_DM LINE Penelope 1 336 -258 1 730 1006 86 182 18 chrX 19016299 19016464 -3406363 + DNAREP1_DM LINE Penelope 398 589 -5 1 730 192 125 0 0 chrX 19020661 19020693 -3402134 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1 730 249 108 0 0 chrX 19021500 19021537 -3401290 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 730 279 177 0 0 chrX 19023506 19023568 -3399259 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 730 21 36 0 0 chrX 19024119 19024147 -3398680 + AT_rich Low_complexity Low_complexity 1 28 0 1 730 207 108 26 26 chrX 19028146 19028184 -3394643 + (CCCGAA)n Simple_repeat Simple_repeat 2 39 0 1 730 207 182 0 0 chrX 19029001 19029034 -3393793 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1 730 218 216 0 19 chrX 19029357 19029409 -3393418 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1 730 4462 4 0 0 chrX 19030639 19031120 -3391707 + T412LTR LTR LTR 1 481 0 1 730 45713 2 0 2 chrX 19030806 19035865 -3386962 + DM412 LTR Gypsy 1 5052 -1845 1 730 11289 2 0 2 chrX 19035853 19037130 -3385697 + DM412 LTR Gypsy 5623 6897 0 1 730 4462 4 0 0 chrX 19037020 19037501 -3385326 + T412LTR LTR LTR 1 481 0 1 730 234 62 0 0 chrX 19040789 19040821 -3382006 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 730 203 200 22 0 chrX 19041178 19041223 -3381604 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 1 730 21 0 0 0 chrX 19041364 19041385 -3381442 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 180 125 0 0 chrX 19042127 19042159 -3380668 + (T)n Simple_repeat Simple_repeat 1 32 0 1 730 198 103 0 0 chrX 19043265 19043294 -3379533 + (A)n Simple_repeat Simple_repeat 1 29 0 1 730 180 200 0 0 chrX 19043867 19043907 -3378920 + (CATA)n Simple_repeat Simple_repeat 3 42 0 1 730 218 286 0 0 chrX 19045654 19045738 -3377089 + (TCG)n Simple_repeat Simple_repeat 1 84 0 1 730 250 226 0 0 chrX 19045672 19045734 -3377093 + CT-rich Low_complexity Low_complexity 2 63 0 1 730 23 0 0 0 chrX 19046561 19046584 -3376243 + AT_rich Low_complexity Low_complexity 1 23 0 1 730 24 0 0 0 chrX 19046819 19046843 -3375984 + AT_rich Low_complexity Low_complexity 1 24 0 1 730 27 0 0 0 chrX 19046930 19046957 -3375870 + AT_rich Low_complexity Low_complexity 1 27 0 1 730 416 256 0 6 chrX 19047073 19047246 -3375581 + (TTG)n Simple_repeat Simple_repeat 2 173 0 1 730 195 186 0 0 chrX 19047302 19047345 -3375482 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1 730 24 53 0 0 chrX 19051515 19051553 -3371274 + AT_rich Low_complexity Low_complexity 1 38 0 1 730 213 94 0 0 chrX 19052890 19052922 -3369905 + (CAGAA)n Simple_repeat Simple_repeat 1 32 0 1 730 321 89 0 0 chrX 19053720 19053765 -3369062 + (TAAAAA)n Simple_repeat Simple_repeat 5 49 0 1 730 24 0 0 0 chrX 19054197 19054221 -3368606 + AT_rich Low_complexity Low_complexity 1 24 0 1 730 33 0 0 0 chrX 19054826 19054859 -3367968 + AT_rich Low_complexity Low_complexity 1 33 0 1 730 216 67 0 0 chrX 19055175 19055205 -3367622 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 730 21 0 0 0 chrX 19056144 19056165 -3366662 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 255 203 0 0 chrX 19058546 19058615 -3364212 + (TTG)n Simple_repeat Simple_repeat 2 70 0 1 730 287 49 0 24 chrX 19060339 19060381 -3362446 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 730 21 0 0 0 chrX 19061689 19061710 -3361117 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 21 0 0 0 chrX 19066327 19066348 -3356479 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 24 100 0 0 chrX 19069721 19069801 -3353026 + AT_rich Low_complexity Low_complexity 1 80 0 1 730 219 220 0 0 chrX 19074668 19074718 -3348109 + (CCA)n Simple_repeat Simple_repeat 3 52 0 1 730 261 146 0 0 chrX 19075942 19075990 -3346837 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 730 21 0 0 0 chrX 19077044 19077065 -3345762 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 30 45 0 0 chrX 19077118 19077162 -3345665 + AT_rich Low_complexity Low_complexity 1 44 0 1 730 207 0 0 0 chrX 19077791 19077814 -3345013 + (ATATG)n Simple_repeat Simple_repeat 1 23 0 1 730 23 0 0 0 chrX 19079564 19079587 -3343240 + AT_rich Low_complexity Low_complexity 1 23 0 1 730 337 182 0 0 chrX 19080676 19080753 -3342074 + ROO_I LTR Pao 664 740 -7516 1 730 26 30 0 0 chrX 19081075 19081108 -3341719 + AT_rich Low_complexity Low_complexity 1 33 0 1 730 211 150 0 24 chrX 19081352 19081393 -3341434 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 730 24 0 0 0 chrX 19084169 19084193 -3338634 + AT_rich Low_complexity Low_complexity 1 24 0 1 730 201 183 0 0 chrX 19084361 19084421 -3338406 + GA-rich Low_complexity Low_complexity 1 60 0 1 730 1978 102 150 12 chrX 19085755 19086436 -3336391 + DNAREP1_DM LINE Penelope 2 561 -33 1 730 216 0 0 0 chrX 19089751 19089775 -3333052 + (CCAA)n Simple_repeat Simple_repeat 4 27 0 1 730 189 121 0 0 chrX 19090320 19090353 -3332474 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 730 22 56 0 0 chrX 19092955 19092991 -3329836 + AT_rich Low_complexity Low_complexity 1 36 0 1 730 22 35 0 0 chrX 19093053 19093082 -3329745 + AT_rich Low_complexity Low_complexity 1 29 0 1 730 21 36 0 0 chrX 19093639 19093667 -3329160 + AT_rich Low_complexity Low_complexity 1 28 0 1 730 212 163 47 0 chrX 19093920 19093963 -3328864 + A-rich Low_complexity Low_complexity 3 47 0 1 730 186 191 0 0 chrX 19094188 19094230 -3328597 + CT-rich Low_complexity Low_complexity 2 43 0 1 730 207 139 0 0 chrX 19095201 19095237 -3327590 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 730 21 0 0 0 chrX 19097570 19097591 -3325236 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 23 0 0 0 chrX 19102730 19102753 -3320074 + AT_rich Low_complexity Low_complexity 1 23 0 1 730 186 43 0 0 chrX 19102790 19102813 -3320014 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 730 201 298 0 26 chrX 19108677 19108794 -3314033 + GA-rich Low_complexity Low_complexity 3 116 0 1 730 22 0 0 0 chrX 19108959 19108981 -3313846 + AT_rich Low_complexity Low_complexity 1 22 0 1 730 21 0 0 0 chrX 19110728 19110749 -3312078 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 29 70 0 0 chrX 19111660 19111717 -3311110 + AT_rich Low_complexity Low_complexity 1 57 0 1 730 205 259 0 0 chrX 19112842 19112896 -3309931 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 1 730 35 41 0 0 chrX 19114149 19114198 -3308629 + AT_rich Low_complexity Low_complexity 1 49 0 1 730 201 121 0 0 chrX 19114566 19114599 -3308228 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 730 210 118 0 0 chrX 19115209 19115243 -3307584 + (GAA)n Simple_repeat Simple_repeat 1 34 0 1 730 180 217 0 0 chrX 19116163 19116209 -3306618 + (CAGAT)n Simple_repeat Simple_repeat 1 46 0 1 730 23 0 0 0 chrX 19116874 19116897 -3305930 + AT_rich Low_complexity Low_complexity 1 23 0 1 730 264 59 0 0 chrX 19117892 19117926 -3304901 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 730 24 32 0 0 chrX 19119121 19119152 -3303675 + AT_rich Low_complexity Low_complexity 1 31 0 1 730 590 165 113 0 chrX 19122732 19122847 -3299980 + DNAREP1_DM LINE Penelope 467 594 0 1 730 264 77 0 0 chrX 19123506 19123545 -3299282 + (CGGT)n Simple_repeat Simple_repeat 2 40 0 1 730 198 0 0 0 chrX 19126712 19126734 -3296093 + (CAG)n Simple_repeat Simple_repeat 1 22 0 1 730 213 258 0 0 chrX 19126757 19126819 -3296008 + (CAG)n Simple_repeat Simple_repeat 1 62 0 1 730 229 163 34 34 chrX 19126822 19126911 -3295916 + ROO_I LTR Pao 640 728 -7528 1 730 219 169 0 48 chrX 19127987 19128049 -3294778 + (CACCAT)n Simple_repeat Simple_repeat 4 62 0 1 730 186 71 0 0 chrX 19135475 19135503 -3287324 + (CTG)n Simple_repeat Simple_repeat 2 29 0 1 730 204 290 0 0 chrX 19135535 19135597 -3287230 + (ACTG)n Simple_repeat Simple_repeat 3 64 0 1 731 22 0 0 0 chrX 19137238 19137260 -3285567 + AT_rich Low_complexity Low_complexity 1 22 0 1 731 648 109 202 0 chrX 19137261 19137380 -3285447 - DNAREP1_DM LINE Penelope -1 593 451 1 731 398 232 64 0 chrX 19137395 19137520 -3285307 - DNAREP1_DM LINE Penelope -461 133 1 1 731 868 110 103 0 chrX 19140480 19140626 -3282201 + DMRP1 Unknown Unknown 1 161 -185 1 731 264 100 0 0 chrX 19143833 19143873 -3278954 + (CAG)n Simple_repeat Simple_repeat 1 40 0 1 731 207 0 0 0 chrX 19145722 19145745 -3277082 + (AAATG)n Simple_repeat Simple_repeat 3 25 0 1 731 218 116 23 0 chrX 19154109 19154152 -3268675 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 731 243 224 0 0 chrX 19154223 19154299 -3268528 + (TTG)n Simple_repeat Simple_repeat 2 77 0 1 731 184 191 0 67 chrX 19154437 19154527 -3268300 + A-rich Low_complexity Low_complexity 5 88 0 1 731 216 0 0 0 chrX 19154820 19154844 -3267983 + (CAA)n Simple_repeat Simple_repeat 3 26 0 1 731 30 45 0 0 chrX 19156858 19156902 -3265925 + AT_rich Low_complexity Low_complexity 1 44 0 1 731 180 77 0 0 chrX 19157129 19157155 -3265672 + (AATTG)n Simple_repeat Simple_repeat 5 30 0 1 731 237 204 0 0 chrX 19158128 19158172 -3264655 + C-rich Low_complexity Low_complexity 5 48 0 1 731 263 85 21 0 chrX 19158569 19158616 -3264211 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 731 231 114 0 0 chrX 19158657 19158692 -3264135 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 731 200 196 0 0 chrX 19161027 19161073 -3261754 + (CTG)n Simple_repeat Simple_repeat 1 46 0 1 731 219 114 0 0 chrX 19165916 19165951 -3256876 + (T)n Simple_repeat Simple_repeat 1 35 0 1 731 26 0 0 0 chrX 19171102 19171128 -3251699 + AT_rich Low_complexity Low_complexity 1 26 0 1 731 22 0 0 0 chrX 19172167 19172189 -3250638 + AT_rich Low_complexity Low_complexity 1 22 0 1 731 234 178 0 22 chrX 19172536 19172582 -3250245 + DNAREP1_DM LINE Penelope 21 65 -529 1 731 32 0 0 0 chrX 19175247 19175279 -3247548 + AT_rich Low_complexity Low_complexity 1 32 0 1 731 294 73 0 0 chrX 19175372 19175413 -3247414 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 731 22 0 0 0 chrX 19175660 19175682 -3247145 + AT_rich Low_complexity Low_complexity 1 22 0 1 731 222 37 0 0 chrX 19175773 19175800 -3247027 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 731 450 36 0 0 chrX 19181990 19182046 -3240781 + (TGGA)n Simple_repeat Simple_repeat 4 59 0 1 731 21 0 0 0 chrX 19182953 19182974 -3239853 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 213 209 0 0 chrX 19183207 19183250 -3239577 + (CAACT)n Simple_repeat Simple_repeat 1 43 0 1 731 208 211 51 38 chrX 19183288 19183367 -3239460 + A-rich Low_complexity Low_complexity 5 84 0 1 731 198 0 0 0 chrX 19183835 19183857 -3238970 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 731 204 125 0 0 chrX 19184939 19184971 -3237856 + (TATG)n Simple_repeat Simple_repeat 1 32 0 1 731 186 103 0 0 chrX 19186731 19186760 -3236067 + (A)n Simple_repeat Simple_repeat 1 29 0 1 731 25 0 0 0 chrX 19186788 19186813 -3236014 + AT_rich Low_complexity Low_complexity 1 25 0 1 731 195 114 0 0 chrX 19188035 19188070 -3234757 + (T)n Simple_repeat Simple_repeat 1 35 0 1 731 216 67 0 0 chrX 19191232 19191262 -3231565 + (CTGTG)n Simple_repeat Simple_repeat 3 32 0 1 731 243 0 0 0 chrX 19191830 19191857 -3230970 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 731 220 224 17 0 chrX 19192027 19192085 -3230742 + (TCTCTG)n Simple_repeat Simple_repeat 4 62 0 1 731 459 0 0 0 chrX 19192551 19192602 -3230225 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 731 37 0 0 0 chrX 19193511 19193548 -3229279 + AT_rich Low_complexity Low_complexity 1 37 0 1 731 189 0 0 0 chrX 19194479 19194500 -3228327 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1 731 1400 109 135 16 chrX 19194552 19194804 -3228023 + DNAREP1_DM LINE Penelope 118 399 -195 1 731 871 73 117 11 chrX 19194807 19194950 -3227877 + DNAREP1_DM LINE Penelope 466 594 0 1 731 222 91 0 0 chrX 19197909 19197942 -3224885 + (TTG)n Simple_repeat Simple_repeat 2 34 0 1 731 21 36 0 0 chrX 19198403 19198431 -3224396 + AT_rich Low_complexity Low_complexity 1 28 0 1 731 218 136 0 22 chrX 19198746 19198791 -3224036 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 1 731 240 100 0 0 chrX 19199387 19199427 -3223400 + (CCGAA)n Simple_repeat Simple_repeat 3 42 0 1 731 237 139 0 0 chrX 19201617 19201660 -3221167 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 731 209 180 40 0 chrX 19201753 19201803 -3221024 + A-rich Low_complexity Low_complexity 3 54 0 1 731 186 103 0 0 chrX 19202149 19202178 -3220649 + (T)n Simple_repeat Simple_repeat 1 29 0 1 731 207 69 0 0 chrX 19208628 19208657 -3214170 + (T)n Simple_repeat Simple_repeat 1 29 0 1 731 225 0 0 0 chrX 19209101 19209126 -3213701 + (CAT)n Simple_repeat Simple_repeat 1 25 0 1 731 28 29 0 0 chrX 19210067 19210102 -3212725 + AT_rich Low_complexity Low_complexity 1 35 0 1 731 31 26 0 0 chrX 19211200 19211238 -3211589 + AT_rich Low_complexity Low_complexity 1 38 0 1 731 249 0 73 0 chrX 19211254 19211295 -3211532 + (TTA)n Simple_repeat Simple_repeat 1 44 0 1 731 207 231 0 0 chrX 19211686 19211725 -3211102 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 731 219 245 0 0 chrX 19213398 19213451 -3209376 + CT-rich Low_complexity Low_complexity 4 56 0 1 731 24 0 0 0 chrX 19216313 19216337 -3206490 + AT_rich Low_complexity Low_complexity 1 24 0 1 731 21 0 0 0 chrX 19216418 19216439 -3206388 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 207 195 0 0 chrX 19216602 19216643 -3206184 + CT-rich Low_complexity Low_complexity 2 42 0 1 731 186 71 0 0 chrX 19217006 19217034 -3205793 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 731 203 259 12 0 chrX 19218254 19218339 -3204488 + (CATA)n Simple_repeat Simple_repeat 2 87 0 1 731 25 31 0 0 chrX 19219886 19219918 -3202909 + AT_rich Low_complexity Low_complexity 1 32 0 1 731 543 115 168 0 chrX 19220550 19220663 -3202164 + DNAREP1_DM LINE Penelope 303 434 -160 1 731 207 69 0 0 chrX 19221419 19221448 -3201379 + (A)n Simple_repeat Simple_repeat 1 29 0 1 731 180 0 0 0 chrX 19221619 19221639 -3201188 + (TTC)n Simple_repeat Simple_repeat 3 22 0 1 731 231 36 0 0 chrX 19222348 19222376 -3200451 + (TATG)n Simple_repeat Simple_repeat 4 31 0 1 731 21 0 0 0 chrX 19223067 19223088 -3199739 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 180 152 0 0 chrX 19223131 19223164 -3199663 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 731 217 233 0 0 chrX 19223355 19223415 -3199412 + T-rich Low_complexity Low_complexity 1 60 0 1 731 406 77 0 0 chrX 19224658 19224710 -3198117 + DNAREP1_DM LINE Penelope 2 53 -541 1 731 1067 89 155 0 chrX 19224708 19224876 -3197951 + DNAREP1_DM LINE Penelope 400 593 -1 1 731 47 0 0 0 chrX 19225084 19225131 -3197696 + AT_rich Low_complexity Low_complexity 1 47 0 1 731 225 0 0 0 chrX 19225798 19225823 -3197004 + (T)n Simple_repeat Simple_repeat 1 25 0 1 731 270 0 0 0 chrX 19226064 19226094 -3196733 + (T)n Simple_repeat Simple_repeat 1 30 0 1 731 186 71 0 0 chrX 19226214 19226242 -3196585 + (T)n Simple_repeat Simple_repeat 1 28 0 1 731 22 35 0 0 chrX 19226991 19227020 -3195807 + AT_rich Low_complexity Low_complexity 1 29 0 1 731 21 0 0 0 chrX 19227424 19227445 -3195382 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 252 100 0 0 chrX 19228361 19228401 -3194426 + (T)n Simple_repeat Simple_repeat 1 40 0 1 731 28 0 0 0 chrX 19229150 19229178 -3193649 + AT_rich Low_complexity Low_complexity 1 28 0 1 731 288 53 0 0 chrX 19229829 19229867 -3192960 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 731 297 75 0 0 chrX 19233253 19233293 -3189534 + (TATG)n Simple_repeat Simple_repeat 4 43 0 1 731 222 62 0 0 chrX 19233342 19233374 -3189453 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 731 29 0 0 0 chrX 19233734 19233763 -3189064 + AT_rich Low_complexity Low_complexity 1 29 0 1 731 23 0 0 0 chrX 19235226 19235249 -3187578 + AT_rich Low_complexity Low_complexity 1 23 0 1 731 25 0 0 0 chrX 19236148 19236173 -3186654 + AT_rich Low_complexity Low_complexity 1 25 0 1 731 25 31 0 0 chrX 19238631 19238663 -3184164 + AT_rich Low_complexity Low_complexity 1 32 0 1 731 21 57 0 0 chrX 19239513 19239548 -3183279 + AT_rich Low_complexity Low_complexity 1 35 0 1 731 294 73 0 0 chrX 19239856 19239897 -3182930 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 1 731 35 24 0 0 chrX 19240967 19241009 -3181818 + AT_rich Low_complexity Low_complexity 1 42 0 1 731 33 0 0 0 chrX 19241135 19241168 -3181659 + AT_rich Low_complexity Low_complexity 1 33 0 1 731 219 125 0 0 chrX 19241942 19241982 -3180845 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 731 282 56 0 0 chrX 19242111 19242147 -3180680 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 731 22 35 0 0 chrX 19243668 19243697 -3179130 + AT_rich Low_complexity Low_complexity 1 29 0 1 731 267 311 9 19 chrX 19243923 19244028 -3178799 - Jockey2 LINE Jockey -418 3010 2907 1 731 23 0 0 0 chrX 19244458 19244481 -3178346 + AT_rich Low_complexity Low_complexity 1 23 0 1 731 21 0 0 0 chrX 19245724 19245745 -3177082 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 584 172 32 32 chrX 19245859 19245985 -3176842 + DNAREP1_DM LINE Penelope 261 386 -208 1 731 725 135 94 16 chrX 19246600 19246842 -3175985 + DNAREP1_DM LINE Penelope 5 401 -193 1 731 36 40 0 0 chrX 19246954 19247004 -3175823 + AT_rich Low_complexity Low_complexity 1 50 0 1 731 201 211 0 0 chrX 19247136 19247188 -3175639 + (TTCGG)n Simple_repeat Simple_repeat 2 53 0 1 731 216 216 0 0 chrX 19247893 19247944 -3174883 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1 731 194 207 17 0 chrX 19248145 19248203 -3174624 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 731 207 49 48 24 chrX 19248526 19248568 -3174259 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 1 731 222 37 0 0 chrX 19249055 19249082 -3173745 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 731 3513 45 29 13 chrX 19251077 19251551 -3171276 + FB4_DM DNA Tc1 1 482 -3607 1 731 1335 13 0 0 chrX 19251551 19251701 -3171126 - NOF_FB DNA MuDR? 0 4347 4198 1 731 6327 8 3 7 chrX 19251697 19252456 -3170371 + FB4_DM DNA Tc1 3334 4089 0 1 731 282 106 0 0 chrX 19253140 19253187 -3169640 + (CAA)n Simple_repeat Simple_repeat 1 47 0 1 731 189 74 0 0 chrX 19253350 19253377 -3169450 + (A)n Simple_repeat Simple_repeat 1 27 0 1 731 204 241 0 0 chrX 19253606 19253664 -3169163 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1 731 330 67 0 0 chrX 19253819 19253864 -3168963 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1 731 185 111 56 0 chrX 19255041 19255077 -3167750 + (CATA)n Simple_repeat Simple_repeat 3 40 0 1 731 252 261 0 14 chrX 19255963 19256033 -3166794 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 731 200 143 29 0 chrX 19257249 19257284 -3165543 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 731 219 204 0 20 chrX 19258391 19258441 -3164386 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 731 205 161 17 67 chrX 19258755 19258815 -3164012 + T-rich Low_complexity Low_complexity 3 59 0 1 731 243 0 0 0 chrX 19259686 19259713 -3163114 + (CGAA)n Simple_repeat Simple_repeat 2 28 0 1 731 258 56 0 0 chrX 19261764 19261800 -3161027 + (TTTTTA)n Simple_repeat Simple_repeat 1 36 0 1 731 216 149 0 0 chrX 19261899 19261946 -3160881 + (GGATG)n Simple_repeat Simple_repeat 4 50 0 1 731 28 29 0 0 chrX 19263942 19263977 -3158850 + AT_rich Low_complexity Low_complexity 1 35 0 1 731 264 77 0 0 chrX 19265542 19265581 -3157246 + (A)n Simple_repeat Simple_repeat 1 39 0 1 731 719 125 338 39 chrX 19265583 19265953 -3156874 + DNAREP1_DM LINE Penelope 1 593 -1 1 731 202 159 31 16 chrX 19266025 19266089 -3156738 + (CACTC)n Simple_repeat Simple_repeat 5 69 0 1 731 210 171 0 0 chrX 19267504 19267539 -3155288 + T-rich Low_complexity Low_complexity 4 38 0 1 732 236 235 0 0 chrX 19267702 19267753 -3155074 + (CCCA)n Simple_repeat Simple_repeat 2 52 0 1 732 273 119 0 0 chrX 19268002 19268044 -3154783 + (CACCAT)n Simple_repeat Simple_repeat 1 42 0 1 732 201 74 0 0 chrX 19269233 19269260 -3153567 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 732 192 77 0 0 chrX 19269354 19269380 -3153447 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 732 222 116 0 0 chrX 19269735 19269778 -3153049 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 1 732 180 0 0 0 chrX 19272191 19272211 -3150616 + (TGGA)n Simple_repeat Simple_repeat 4 23 0 1 732 212 100 0 24 chrX 19272222 19272263 -3150564 + (GATTG)n Simple_repeat Simple_repeat 2 41 0 1 732 21 0 0 0 chrX 19273223 19273244 -3149583 + AT_rich Low_complexity Low_complexity 1 21 0 1 732 208 147 0 0 chrX 19273420 19273454 -3149373 + (T)n Simple_repeat Simple_repeat 1 34 0 1 732 223 174 0 0 chrX 19273802 19273848 -3148979 + T-rich Low_complexity Low_complexity 1 46 0 1 732 195 42 0 0 chrX 19274068 19274092 -3148735 + (CAT)n Simple_repeat Simple_repeat 2 25 0 1 732 1674 0 0 0 chrX 19274242 19274428 -3148399 - POGON1 DNA Pogo 0 186 1 1 732 207 277 0 0 chrX 19275474 19275539 -3147288 + A-rich Low_complexity Low_complexity 1 65 0 1 732 354 91 0 0 chrX 19276400 19276455 -3146372 + (TCC)n Simple_repeat Simple_repeat 3 57 0 1 732 357 43 0 0 chrX 19276689 19276736 -3146091 + (CCTG)n Simple_repeat Simple_repeat 3 49 0 1 732 183 80 0 0 chrX 19277044 19277069 -3145758 + (A)n Simple_repeat Simple_repeat 1 25 0 1 732 21 0 0 0 chrX 19278399 19278420 -3144407 + AT_rich Low_complexity Low_complexity 1 21 0 1 732 22 0 0 0 chrX 19278813 19278835 -3143992 + AT_rich Low_complexity Low_complexity 1 22 0 1 732 40 49 0 0 chrX 19279854 19279915 -3142912 + AT_rich Low_complexity Low_complexity 1 61 0 1 732 207 0 0 0 chrX 19281281 19281304 -3141523 + (T)n Simple_repeat Simple_repeat 1 23 0 1 732 232 246 0 0 chrX 19281780 19281837 -3140990 + (CCAA)n Simple_repeat Simple_repeat 3 59 0 1 732 39 22 0 0 chrX 19282246 19282292 -3140535 + AT_rich Low_complexity Low_complexity 1 46 0 1 732 189 0 0 0 chrX 19283951 19283972 -3138855 + (CAACG)n Simple_repeat Simple_repeat 2 22 0 1 732 282 29 0 0 chrX 19283999 19284034 -3138793 + (CCAA)n Simple_repeat Simple_repeat 4 38 0 1 732 246 62 0 0 chrX 19284198 19284230 -3138597 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 732 201 74 0 0 chrX 19287034 19287061 -3135766 + (A)n Simple_repeat Simple_repeat 1 27 0 1 732 21 0 0 0 chrX 19287285 19287306 -3135521 + AT_rich Low_complexity Low_complexity 1 21 0 1 732 333 0 0 0 chrX 19287413 19287450 -3135377 + (T)n Simple_repeat Simple_repeat 1 37 0 1 732 198 0 0 0 chrX 19287976 19287998 -3134829 + (CTG)n Simple_repeat Simple_repeat 3 24 0 1 732 227 268 0 0 chrX 19288902 19288958 -3133869 + (CAAAC)n Simple_repeat Simple_repeat 5 60 0 1 732 242 290 0 0 chrX 19289110 19289179 -3133648 + (CGGA)n Simple_repeat Simple_repeat 4 72 0 1 732 213 39 0 0 chrX 19289219 19289245 -3133582 + (CAGC)n Simple_repeat Simple_repeat 4 29 0 1 732 237 132 0 0 chrX 19289395 19289433 -3133394 + (CAGAGA)n Simple_repeat Simple_repeat 6 43 0 1 732 200 111 28 0 chrX 19289467 19289503 -3133324 + (CGGA)n Simple_repeat Simple_repeat 1 37 0 1 732 231 125 0 0 chrX 19290430 19290470 -3132357 + (T)n Simple_repeat Simple_repeat 1 40 0 1 732 210 105 0 0 chrX 19290844 19290882 -3131945 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 732 24 0 0 0 chrX 19291386 19291410 -3131417 + AT_rich Low_complexity Low_complexity 1 24 0 1 732 237 178 0 0 chrX 19291857 19291902 -3130925 + (CATA)n Simple_repeat Simple_repeat 2 46 0 1 732 522 91 0 0 chrX 19292030 19292107 -3130720 + (ACTG)n Simple_repeat Simple_repeat 2 78 0 1 732 264 175 0 0 chrX 19292915 19292955 -3129872 + DNAREP1_DM LINE Penelope 32 71 -523 1 732 211 150 25 0 chrX 19294471 19294511 -3128316 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 732 321 82 0 0 chrX 19294769 19294818 -3128009 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 732 244 110 70 47 chrX 19295836 19295922 -3126905 + (CCCA)n Simple_repeat Simple_repeat 2 89 0 1 732 27 29 0 0 chrX 19296076 19296110 -3126717 + AT_rich Low_complexity Low_complexity 1 34 0 1 732 279 0 0 0 chrX 19296132 19296163 -3126664 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 732 40 59 0 0 chrX 19296537 19296605 -3126222 + AT_rich Low_complexity Low_complexity 1 68 0 1 732 195 100 0 0 chrX 19297312 19297342 -3125485 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 1 732 199 0 0 61 chrX 19298065 19298098 -3124729 + (GCTG)n Simple_repeat Simple_repeat 1 31 0 1 732 22 0 0 0 chrX 19298593 19298615 -3124212 + AT_rich Low_complexity Low_complexity 1 22 0 1 732 24 0 0 0 chrX 19298863 19298887 -3123940 + GC_rich Low_complexity Low_complexity 1 24 0 1 732 297 75 0 0 chrX 19299125 19299165 -3123662 + (TACTG)n Simple_repeat Simple_repeat 5 44 0 1 732 327 49 0 0 chrX 19300363 19300404 -3122423 + (CGAAT)n Simple_repeat Simple_repeat 2 42 0 1 732 366 115 0 0 chrX 19302448 19302509 -3120318 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 1 732 217 236 69 0 chrX 19303034 19303106 -3119721 + (CATATA)n Simple_repeat Simple_repeat 1 77 0 1 732 23 0 0 0 chrX 19303483 19303506 -3119321 + AT_rich Low_complexity Low_complexity 1 23 0 1 732 23 0 0 0 chrX 19306180 19306203 -3116624 + AT_rich Low_complexity Low_complexity 1 23 0 1 732 219 218 0 0 chrX 19309774 19309829 -3112998 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 732 307 60 20 20 chrX 19310333 19310384 -3112443 + (ATG)n Simple_repeat Simple_repeat 3 53 0 1 732 219 36 0 0 chrX 19311647 19311675 -3111152 + (CGAAT)n Simple_repeat Simple_repeat 5 32 0 1 732 262 305 0 0 chrX 19312043 19312148 -3110679 + A-rich Low_complexity Low_complexity 1 105 0 1 732 195 69 0 0 chrX 19313198 19313227 -3109600 + (CACGC)n Simple_repeat Simple_repeat 3 31 0 1 732 756 180 248 50 chrX 19313499 19313721 -3109106 - DMRP1 Unknown Unknown -46 300 35 1 732 252 59 0 0 chrX 19317360 19317394 -3105433 + (A)n Simple_repeat Simple_repeat 1 34 0 1 732 264 59 0 0 chrX 19317629 19317663 -3105164 + (CAG)n Simple_repeat Simple_repeat 3 36 0 1 732 267 114 0 0 chrX 19318716 19318760 -3104067 + (ACTG)n Simple_repeat Simple_repeat 1 44 0 1 732 241 229 0 0 chrX 19318855 19318903 -3103924 + (CAG)n Simple_repeat Simple_repeat 2 49 0 1 732 259 183 14 40 chrX 19318947 19319021 -3103806 + (TTG)n Simple_repeat Simple_repeat 2 73 0 1 732 249 83 0 0 chrX 19320829 19320865 -3101962 + (TTGG)n Simple_repeat Simple_repeat 3 38 0 1 732 201 143 0 0 chrX 19323041 19323076 -3099751 + (TCC)n Simple_repeat Simple_repeat 3 37 0 1 732 237 274 0 0 chrX 19323341 19323392 -3099435 + T-rich Low_complexity Low_complexity 6 56 0 1 732 251 274 12 12 chrX 19323463 19323548 -3099279 + (TTCCG)n Simple_repeat Simple_repeat 1 85 0 1 732 222 219 0 0 chrX 19325388 19325452 -3097375 + (CCCGAA)n Simple_repeat Simple_repeat 6 69 0 1 732 261 0 0 0 chrX 19325467 19325496 -3097331 + (AAGTG)n Simple_repeat Simple_repeat 3 31 0 1 732 283 58 57 19 chrX 19326110 19326163 -3096664 + (GGATG)n Simple_repeat Simple_repeat 1 55 0 1 732 216 0 0 0 chrX 19327641 19327665 -3095162 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 732 247 208 0 0 chrX 19328482 19328530 -3094297 + DNAREP1_DM LINE Penelope 32 79 -515 1 732 332 136 0 17 chrX 19328607 19328667 -3094160 + DNAREP1_DM LINE Penelope 536 594 0 1 732 198 0 0 0 chrX 19330071 19330093 -3092734 + (CAGT)n Simple_repeat Simple_repeat 2 23 0 1 732 180 77 0 0 chrX 19330827 19330853 -3091974 + (TCC)n Simple_repeat Simple_repeat 3 28 0 1 732 24 0 0 0 chrX 19331247 19331271 -3091556 + AT_rich Low_complexity Low_complexity 1 24 0 1 732 180 0 0 0 chrX 19331338 19331358 -3091469 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 732 4970 7 31 0 chrX 19331358 19331933 -3090894 - IDEFIX_LTR LTR Gypsy -1 593 1 1 732 48431 9 0 1 chrX 19331933 19337569 -3085258 - IDEFIX_I LTR Gypsy 0 5628 1 1 732 25 0 0 0 chrX 19338027 19338052 -3084775 + AT_rich Low_complexity Low_complexity 1 25 0 1 732 4918 7 31 0 chrX 19338242 19338818 -3084009 - IDEFIX_LTR LTR Gypsy 0 594 1 1 732 270 100 0 0 chrX 19338786 19338826 -3084001 + BARI1 DNA Tc1 3 42 -1708 1 732 24 53 0 0 chrX 19338898 19338936 -3083891 + AT_rich Low_complexity Low_complexity 1 38 0 1 732 23 0 0 0 chrX 19339031 19339054 -3083773 + AT_rich Low_complexity Low_complexity 1 23 0 1 732 21 0 0 0 chrX 19340011 19340032 -3082795 + AT_rich Low_complexity Low_complexity 1 21 0 1 732 186 71 0 0 chrX 19340668 19340696 -3082131 + (T)n Simple_repeat Simple_repeat 1 28 0 1 732 202 279 0 0 chrX 19340810 19340878 -3081949 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 732 189 121 0 0 chrX 19340918 19340951 -3081876 + (A)n Simple_repeat Simple_repeat 1 33 0 1 732 198 0 0 0 chrX 19342375 19342397 -3080430 + (A)n Simple_repeat Simple_repeat 1 22 0 1 732 210 118 0 0 chrX 19343961 19343995 -3078832 + (CCA)n Simple_repeat Simple_repeat 1 34 0 1 732 330 324 0 0 chrX 19346840 19346914 -3075913 + G-rich Low_complexity Low_complexity 103 176 0 1 732 227 0 0 160 chrX 19346915 19347109 -3075718 + (GGATG)n Simple_repeat Simple_repeat 3 165 0 1 732 186 189 0 0 chrX 19349144 19349181 -3073646 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 732 246 32 0 0 chrX 19349922 19349953 -3072874 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 732 261 0 0 0 chrX 19350338 19350367 -3072460 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 732 189 107 0 0 chrX 19351746 19351774 -3071053 + (CCCGAA)n Simple_repeat Simple_repeat 4 31 0 1 732 219 125 0 0 chrX 19351852 19351892 -3070935 + (ATG)n Simple_repeat Simple_repeat 1 40 0 1 732 186 118 0 0 chrX 19352225 19352259 -3070568 + (A)n Simple_repeat Simple_repeat 1 34 0 1 732 213 250 0 0 chrX 19353493 19353537 -3069290 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 1 732 23 33 0 0 chrX 19354010 19354040 -3068787 + AT_rich Low_complexity Low_complexity 1 30 0 1 732 22 35 0 0 chrX 19354630 19354659 -3068168 + AT_rich Low_complexity Low_complexity 1 29 0 1 732 234 62 0 0 chrX 19355466 19355498 -3067329 + (GCTG)n Simple_repeat Simple_repeat 4 35 0 1 732 229 253 12 25 chrX 19356970 19357051 -3065776 + CT-rich Low_complexity Low_complexity 2 81 0 1 732 24 53 0 0 chrX 19357535 19357573 -3065254 + AT_rich Low_complexity Low_complexity 1 38 0 1 732 234 62 0 0 chrX 19357883 19357915 -3064912 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 732 257 0 0 29 chrX 19361330 19361364 -3061463 + (CATA)n Simple_repeat Simple_repeat 3 35 0 1 732 286 178 0 0 chrX 19362706 19362796 -3060031 + ROO_I LTR Pao 640 729 -7527 1 732 269 111 0 0 chrX 19363236 19363281 -3059546 + ROO_I LTR Pao 675 719 -7537 1 732 204 158 0 0 chrX 19363657 19363695 -3059132 + (GAATG)n Simple_repeat Simple_repeat 1 38 0 1 732 189 74 0 0 chrX 19364074 19364101 -3058726 + (A)n Simple_repeat Simple_repeat 1 27 0 1 732 240 271 0 0 chrX 19364254 19364313 -3058514 + (CATA)n Simple_repeat Simple_repeat 2 60 0 1 732 373 141 0 23 chrX 19364493 19364580 -3058247 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 732 213 39 0 0 chrX 19365406 19365432 -3057395 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 732 211 213 0 0 chrX 19365734 19365781 -3057046 + A-rich Low_complexity Low_complexity 2 48 0 1 732 4424 12 0 2 chrX 19366217 19366719 -3056108 - LINEJ1_DM LINE Jockey -1 5019 4519 1 732 29 28 0 0 chrX 19368163 19368199 -3054628 + AT_rich Low_complexity Low_complexity 1 36 0 1 732 200 306 6 36 chrX 19378019 19378185 -3044642 + (CAA)n Simple_repeat Simple_repeat 2 162 0 1 732 213 235 0 0 chrX 19379241 19379326 -3043501 + T-rich Low_complexity Low_complexity 5 89 0 1 732 252 0 0 0 chrX 19380703 19380731 -3042096 + (CTG)n Simple_repeat Simple_repeat 1 28 0 1 732 270 224 0 0 chrX 19380998 19381074 -3041753 + (CTG)n Simple_repeat Simple_repeat 3 78 0 1 732 180 0 0 0 chrX 19388427 19388447 -3034380 + (CAGAA)n Simple_repeat Simple_repeat 4 23 0 1 732 23 54 0 0 chrX 19389113 19389150 -3033677 + AT_rich Low_complexity Low_complexity 1 37 0 1 732 21 36 0 0 chrX 19391582 19391610 -3031217 + AT_rich Low_complexity Low_complexity 1 28 0 1 732 286 238 0 12 chrX 19392240 19392325 -3030502 + (TATCG)n Simple_repeat Simple_repeat 1 84 0 1 732 201 74 0 0 chrX 19392416 19392443 -3030384 + (AACTG)n Simple_repeat Simple_repeat 5 31 0 1 732 211 220 0 0 chrX 19392556 19392606 -3030221 + T-rich Low_complexity Low_complexity 1 50 0 1 732 198 71 0 0 chrX 19393137 19393165 -3029662 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 732 207 0 0 0 chrX 19393737 19393760 -3029067 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 1 732 198 143 0 0 chrX 19395841 19395876 -3026951 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 732 1979 128 142 13 chrX 19396507 19396980 -3025847 + FB4_DM DNA Tc1 1 534 -3555 1 732 385 71 0 0 chrX 19396949 19397005 -3025822 + FB4_DM DNA Tc1 4034 4089 0 1 733 189 121 0 0 chrX 19399892 19399925 -3022902 + (ATTCG)n Simple_repeat Simple_repeat 1 33 0 1 733 216 178 0 0 chrX 19400811 19400856 -3021971 + CT-rich Low_complexity Low_complexity 1 45 0 1 733 21 0 0 0 chrX 19402910 19402931 -3019896 + AT_rich Low_complexity Low_complexity 1 21 0 1 733 25 31 0 0 chrX 19403502 19403534 -3019293 + AT_rich Low_complexity Low_complexity 1 32 0 1 733 642 125 0 0 chrX 19407762 19407874 -3014953 + (CAG)n Simple_repeat Simple_repeat 1 112 0 1 733 204 122 0 0 chrX 19408814 19408855 -3013972 + (GGAGAA)n Simple_repeat Simple_repeat 6 46 0 1 733 26 0 0 0 chrX 19411313 19411339 -3011488 + AT_rich Low_complexity Low_complexity 1 26 0 1 733 195 42 0 0 chrX 19411445 19411469 -3011358 + (CGA)n Simple_repeat Simple_repeat 2 25 0 1 733 180 77 0 0 chrX 19412752 19412778 -3010049 + (CAACT)n Simple_repeat Simple_repeat 3 28 0 1 733 216 97 0 0 chrX 19413113 19413144 -3009683 + (CTG)n Simple_repeat Simple_repeat 2 32 0 1 733 34 55 0 0 chrX 19419540 19419595 -3003232 + AT_rich Low_complexity Low_complexity 1 55 0 1 733 197 33 0 32 chrX 19419677 19419708 -3003119 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1 733 225 0 0 0 chrX 19420728 19420753 -3002074 + (CGAAT)n Simple_repeat Simple_repeat 3 27 0 1 733 271 308 0 0 chrX 19420893 19421108 -3001719 + (CCA)n Simple_repeat Simple_repeat 1 215 0 1 733 26 0 0 0 chrX 19422202 19422228 -3000599 + AT_rich Low_complexity Low_complexity 1 26 0 1 733 186 103 0 0 chrX 19425070 19425099 -2997728 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 733 29 0 0 0 chrX 19425870 19425899 -2996928 + AT_rich Low_complexity Low_complexity 1 29 0 1 733 204 158 0 0 chrX 19426436 19426474 -2996353 + (CAGAT)n Simple_repeat Simple_repeat 2 39 0 1 733 25 31 0 0 chrX 19426570 19426602 -2996225 + AT_rich Low_complexity Low_complexity 1 32 0 1 733 204 40 0 0 chrX 19426815 19426840 -2995987 + (A)n Simple_repeat Simple_repeat 1 25 0 1 733 225 125 0 51 chrX 19427015 19427074 -2995753 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 733 185 119 0 23 chrX 19428442 19428485 -2994342 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 733 189 107 0 0 chrX 19429607 19429635 -2993192 + (CACCAT)n Simple_repeat Simple_repeat 2 29 0 1 733 326 42 0 20 chrX 19429822 19429871 -2992956 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 733 232 27 26 26 chrX 19430212 19430250 -2992577 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 733 206 208 0 0 chrX 19431342 19431363 -2991464 + (CAT)n Simple_repeat Simple_repeat 3 23 0 1 733 273 29 0 0 chrX 19431363 19431397 -2991430 + (TCC)n Simple_repeat Simple_repeat 3 36 0 1 733 206 208 0 0 chrX 19431397 19431423 -2991404 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1 733 294 29 0 0 chrX 19431548 19431583 -2991244 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 1 733 234 128 0 0 chrX 19433539 19433578 -2989249 + (ATATG)n Simple_repeat Simple_repeat 2 40 0 1 733 23 68 0 0 chrX 19435251 19435295 -2987532 + AT_rich Low_complexity Low_complexity 1 44 0 1 733 234 62 0 0 chrX 19438303 19438335 -2984492 + (CTG)n Simple_repeat Simple_repeat 3 34 0 1 733 331 125 50 0 chrX 19438418 19438498 -2984329 - ROO_I LTR Pao -7521 735 652 1 733 307 119 0 43 chrX 19438523 19438593 -2984234 - ROO_I LTR Pao -7531 725 659 1 733 281 169 12 24 chrX 19438761 19438846 -2983981 - ROO_I LTR Pao -7532 724 641 1 733 219 150 0 0 chrX 19438868 19438908 -2983919 + (CCA)n Simple_repeat Simple_repeat 2 41 0 1 733 201 180 0 0 chrX 19439589 19439639 -2983188 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 733 213 182 0 0 chrX 19439764 19439797 -2983030 + (CTG)n Simple_repeat Simple_repeat 1 33 0 1 733 231 114 0 0 chrX 19439940 19439975 -2982852 + (CTG)n Simple_repeat Simple_repeat 2 36 0 1 733 246 62 0 0 chrX 19440757 19440789 -2982038 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 733 243 152 0 0 chrX 19441256 19441302 -2981525 + (GTTTG)n Simple_repeat Simple_repeat 5 50 0 1 733 21 36 0 0 chrX 19441756 19441784 -2981043 + AT_rich Low_complexity Low_complexity 1 28 0 1 733 354 173 0 0 chrX 19442639 19442714 -2980113 + GA-rich Low_complexity Low_complexity 1 75 0 1 733 183 42 0 0 chrX 19443127 19443151 -2979676 + (CATTT)n Simple_repeat Simple_repeat 1 24 0 1 733 213 39 0 0 chrX 19443361 19443387 -2979440 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 733 26 74 0 0 chrX 19443914 19443968 -2978859 + AT_rich Low_complexity Low_complexity 1 54 0 1 733 30 0 0 0 chrX 19445099 19445129 -2977698 + AT_rich Low_complexity Low_complexity 1 30 0 1 733 25 31 0 0 chrX 19445439 19445471 -2977356 + AT_rich Low_complexity Low_complexity 1 32 0 1 733 21 0 0 0 chrX 19445932 19445953 -2976874 + AT_rich Low_complexity Low_complexity 1 21 0 1 733 226 143 0 0 chrX 19445990 19446025 -2976802 - DNAREP1_DM LINE Penelope -536 58 24 1 733 183 42 0 0 chrX 19446407 19446431 -2976396 + (CAA)n Simple_repeat Simple_repeat 3 26 0 1 733 207 113 37 19 chrX 19446504 19446558 -2976269 + A-rich Low_complexity Low_complexity 2 56 0 1 733 327 49 0 0 chrX 19447219 19447260 -2975567 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 1 733 217 151 57 0 chrX 19447562 19447615 -2975212 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 733 204 246 0 0 chrX 19448376 19448445 -2974382 + (CCCGAA)n Simple_repeat Simple_repeat 6 74 0 1 733 216 86 0 0 chrX 19448755 19448790 -2974037 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 1 733 267 109 327 0 chrX 19448904 19448959 -2973868 - DMRP1 Unknown Unknown -6 340 268 1 733 487 154 11 11 chrX 19449009 19449101 -2973726 - DMRP1 Unknown Unknown -253 93 2 1 733 31 26 0 0 chrX 19449221 19449259 -2973568 + AT_rich Low_complexity Low_complexity 1 38 0 1 733 231 263 0 0 chrX 19453862 19453919 -2968908 + (GCTG)n Simple_repeat Simple_repeat 3 59 0 1 733 195 204 0 0 chrX 19454270 19454314 -2968513 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 733 210 171 0 0 chrX 19454406 19454447 -2968380 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 733 29 28 0 0 chrX 19455981 19456017 -2966810 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 249 204 56 0 chrX 19463543 19463597 -2959230 + DNAREP1_DM LINE Penelope 530 586 -8 1 733 35 71 0 0 chrX 19463862 19463932 -2958895 + AT_rich Low_complexity Low_complexity 1 70 0 1 733 186 43 0 0 chrX 19464164 19464187 -2958640 + (TTTAG)n Simple_repeat Simple_repeat 3 25 0 1 733 227 31 31 0 chrX 19464500 19464532 -2958295 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 733 214 89 0 62 chrX 19465088 19465136 -2957691 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 1 733 207 167 36 36 chrX 19465143 19465199 -2957628 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 1 733 213 224 0 0 chrX 19473283 19473341 -2949486 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 733 303 172 69 0 chrX 19481274 19481332 -2941495 + DNAREP1_DM LINE Penelope 424 485 -109 1 733 408 74 0 0 chrX 19484411 19484465 -2938362 - DMRP1 Unknown Unknown -74 272 219 1 733 355 147 0 42 chrX 19484438 19484509 -2938318 - DMRP1 Unknown Unknown -240 106 39 1 733 235 200 22 0 chrX 19485383 19485428 -2937399 + DNAREP1_DM LINE Penelope 34 79 -515 1 733 473 76 291 0 chrX 19485536 19485615 -2937212 + DMRP1 Unknown Unknown 23 124 -222 1 733 487 109 117 21 chrX 19485639 19485733 -2937094 + DMRP1 Unknown Unknown 211 313 -33 1 733 21 0 0 0 chrX 19489595 19489616 -2933211 + AT_rich Low_complexity Low_complexity 1 21 0 1 733 181 0 69 0 chrX 19489807 19489836 -2932991 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 733 2966 131 21 31 chrX 19490169 19490860 -2931967 - Gypsy12A_LTR LTR Gypsy 0 2336 1633 1 733 1110 126 63 52 chrX 19490885 19491137 -2931690 - Gypsy12A_LTR LTR Gypsy -1371 909 655 1 733 632 80 0 64 chrX 19491174 19491268 -2931559 - Gypsy12A_LTR LTR Gypsy -1780 500 413 1 733 308 85 0 41 chrX 19491304 19491353 -2931474 - Gypsy12A_LTR LTR Gypsy -2223 57 11 1 733 231 74 36 36 chrX 19491504 19491560 -2931267 + (TAAA)n Simple_repeat Simple_repeat 4 59 0 1 733 21 36 0 0 chrX 19493847 19493875 -2928952 + AT_rich Low_complexity Low_complexity 1 28 0 1 733 21 0 0 0 chrX 19495795 19495816 -2927011 + AT_rich Low_complexity Low_complexity 1 21 0 1 733 27 0 0 0 chrX 19496040 19496067 -2926760 + AT_rich Low_complexity Low_complexity 1 27 0 1 733 267 114 0 0 chrX 19496960 19497004 -2925823 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 733 211 211 0 0 chrX 19497485 19497523 -2925304 + (TATG)n Simple_repeat Simple_repeat 3 40 0 1 733 249 33 0 0 chrX 19498519 19498549 -2924278 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 733 212 167 0 0 chrX 19499396 19499432 -2923395 + (CAGAA)n Simple_repeat Simple_repeat 3 38 0 1 733 195 184 0 0 chrX 19499909 19499947 -2922880 + (CATA)n Simple_repeat Simple_repeat 3 40 0 1 733 225 150 50 0 chrX 19501536 19501576 -2921251 + (TATG)n Simple_repeat Simple_repeat 3 44 0 1 733 22 0 0 0 chrX 19502811 19502833 -2919994 + AT_rich Low_complexity Low_complexity 1 22 0 1 733 213 94 0 0 chrX 19503858 19503890 -2918937 + (CATA)n Simple_repeat Simple_repeat 1 32 0 1 733 203 176 0 0 chrX 19504051 19504085 -2918742 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 733 37 52 0 0 chrX 19505140 19505198 -2917629 + AT_rich Low_complexity Low_complexity 1 58 0 1 733 21 57 0 0 chrX 19512889 19512924 -2909903 + AT_rich Low_complexity Low_complexity 1 35 0 1 733 372 59 0 0 chrX 19520914 19520965 -2901862 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 733 192 40 0 0 chrX 19521740 19521765 -2901062 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 733 189 0 0 0 chrX 19522256 19522277 -2900550 + (CTG)n Simple_repeat Simple_repeat 3 23 0 1 733 192 77 0 0 chrX 19525171 19525197 -2897630 + (TATG)n Simple_repeat Simple_repeat 3 28 0 1 733 216 196 0 19 chrX 19529333 19529385 -2893442 + (CTG)n Simple_repeat Simple_repeat 1 51 0 1 734 216 188 0 0 chrX 19529989 19530037 -2892790 + (CTG)n Simple_repeat Simple_repeat 1 48 0 1 734 200 184 0 0 chrX 19530083 19530121 -2892706 + (CGG)n Simple_repeat Simple_repeat 1 38 0 1 734 206 277 11 11 chrX 19530153 19530248 -2892579 + (CTG)n Simple_repeat Simple_repeat 1 95 0 1 734 207 324 0 10 chrX 19530352 19530455 -2892372 + (CTG)n Simple_repeat Simple_repeat 1 102 0 1 734 206 146 0 40 chrX 19530733 19530783 -2892044 + (CATA)n Simple_repeat Simple_repeat 2 49 0 1 734 205 208 0 20 chrX 19531318 19531367 -2891460 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 734 220 179 0 0 chrX 19531546 19531585 -2891242 + (CCA)n Simple_repeat Simple_repeat 1 39 0 1 734 266 240 13 0 chrX 19531981 19532056 -2890771 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 734 303 28 0 0 chrX 19533375 19533411 -2889416 + (CAG)n Simple_repeat Simple_repeat 1 36 0 1 734 204 40 0 0 chrX 19534615 19534640 -2888187 + (CATA)n Simple_repeat Simple_repeat 4 28 0 1 734 24 96 0 0 chrX 19536986 19537059 -2885768 + AT_rich Low_complexity Low_complexity 1 73 0 1 734 21 0 0 0 chrX 19540951 19540972 -2881855 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 21 0 0 0 chrX 19541282 19541303 -2881524 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 180 77 0 0 chrX 19545537 19545563 -2877264 + (CAGC)n Simple_repeat Simple_repeat 2 27 0 1 734 23 0 0 0 chrX 19546437 19546460 -2876367 + AT_rich Low_complexity Low_complexity 1 23 0 1 734 216 86 0 0 chrX 19554863 19554898 -2867929 + (TGG)n Simple_repeat Simple_repeat 1 35 0 1 734 228 149 0 0 chrX 19554896 19554943 -2867884 + (CTG)n Simple_repeat Simple_repeat 1 47 0 1 734 252 279 12 12 chrX 19555383 19555463 -2867364 + (CTG)n Simple_repeat Simple_repeat 1 80 0 1 734 241 218 18 0 chrX 19555845 19555900 -2866927 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 734 198 176 0 0 chrX 19557065 19557116 -2865711 + CT-rich Low_complexity Low_complexity 1 51 0 1 734 4429 43 99 15 chrX 19560263 19560879 -2861948 + G5A_DM LINE Jockey 2174 2841 0 1 734 211 190 51 17 chrX 19562337 19562396 -2860431 + A-rich Low_complexity Low_complexity 4 64 0 1 734 333 68 0 0 chrX 19563932 19563976 -2858851 + (CGAAT)n Simple_repeat Simple_repeat 4 47 0 1 734 222 171 0 0 chrX 19566279 19566320 -2856507 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 734 1577 94 186 68 chrX 19567738 19568103 -2854724 + DNAREP1_DM LINE Penelope 187 594 0 1 734 186 191 0 0 chrX 19570000 19570042 -2852785 + (TATG)n Simple_repeat Simple_repeat 2 43 0 1 734 180 167 0 0 chrX 19571270 19571318 -2851509 + CT-rich Low_complexity Low_complexity 6 53 0 1 734 21 36 0 0 chrX 19573752 19573780 -2849047 + AT_rich Low_complexity Low_complexity 1 28 0 1 734 327 171 0 0 chrX 19577082 19577158 -2845669 + CT-rich Low_complexity Low_complexity 2 77 0 1 734 25 0 0 0 chrX 19580501 19580526 -2842301 + AT_rich Low_complexity Low_complexity 1 25 0 1 734 291 93 0 0 chrX 19581186 19581229 -2841598 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 734 228 35 0 0 chrX 19581268 19581297 -2841530 + (A)n Simple_repeat Simple_repeat 1 29 0 1 734 318 106 0 0 chrX 19581531 19581578 -2841249 + (GCTG)n Simple_repeat Simple_repeat 4 50 0 1 734 21 0 0 0 chrX 19583629 19583650 -2839177 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 213 121 0 0 chrX 19583740 19583773 -2839054 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1 734 202 216 0 0 chrX 19584598 19584635 -2838192 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1 734 203 250 0 0 chrX 19584808 19584864 -2837963 + GA-rich Low_complexity Low_complexity 1 56 0 1 734 202 222 0 0 chrX 19586997 19587042 -2835785 + (ATGTG)n Simple_repeat Simple_repeat 1 45 0 1 734 201 39 0 0 chrX 19588784 19588810 -2834017 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 734 12104 43 40 14 chrX 19589352 19590976 -2831851 + TC1_DM DNA Tc1 1 1666 0 1 734 314 45 23 0 chrX 19592730 19592774 -2830053 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 734 387 83 0 0 chrX 19593207 19593267 -2829560 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 734 219 152 0 0 chrX 19593695 19593741 -2829086 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 734 295 188 0 72 chrX 19594243 19594312 -2828515 - DNAREP1_DM LINE Penelope -140 454 391 1 734 21 36 0 0 chrX 19594360 19594388 -2828439 + AT_rich Low_complexity Low_complexity 1 28 0 1 734 31 0 0 0 chrX 19595868 19595899 -2826928 + AT_rich Low_complexity Low_complexity 1 31 0 1 734 192 77 0 0 chrX 19599669 19599695 -2823132 + (GGA)n Simple_repeat Simple_repeat 3 28 0 1 734 42 57 0 0 chrX 19603518 19603588 -2819239 + AT_rich Low_complexity Low_complexity 1 70 0 1 734 11701 94 4 1 chrX 19604158 19605889 -2816938 - S_DM DNA Tc1 0 1736 1 1 734 219 133 0 0 chrX 19606143 19606188 -2816639 + (TTTTTG)n Simple_repeat Simple_repeat 1 45 0 1 734 213 222 0 0 chrX 19606560 19606614 -2816213 + A-rich Low_complexity Low_complexity 1 54 0 1 734 183 80 0 0 chrX 19607415 19607440 -2815387 + (GGA)n Simple_repeat Simple_repeat 2 26 0 1 734 270 179 0 0 chrX 19607632 19607688 -2815139 + (ATTCG)n Simple_repeat Simple_repeat 1 56 0 1 734 31 68 0 0 chrX 19608584 19608643 -2814184 + AT_rich Low_complexity Low_complexity 1 59 0 1 734 213 94 0 0 chrX 19609122 19609154 -2813673 + (CGAGT)n Simple_repeat Simple_repeat 4 35 0 1 734 203 88 29 0 chrX 19609517 19609551 -2813276 + (CGAT)n Simple_repeat Simple_repeat 4 38 0 1 734 198 71 0 0 chrX 19612593 19612621 -2810206 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 734 213 132 0 0 chrX 19613032 19613070 -2809757 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1 734 237 108 0 0 chrX 19613329 19613366 -2809461 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1 734 261 57 0 0 chrX 19613466 19613501 -2809326 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1 734 201 94 0 0 chrX 19613888 19613920 -2808907 + (A)n Simple_repeat Simple_repeat 1 32 0 1 734 213 65 0 0 chrX 19614013 19614044 -2808783 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 734 186 143 0 0 chrX 19614122 19614157 -2808670 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 734 180 0 0 0 chrX 19614243 19614263 -2808564 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 734 300 53 0 0 chrX 19614737 19614775 -2808052 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 734 222 37 0 0 chrX 19615558 19615585 -2807242 + (CACAC)n Simple_repeat Simple_repeat 4 30 0 1 734 219 36 0 0 chrX 19615906 19615934 -2806893 + (TGG)n Simple_repeat Simple_repeat 3 30 0 1 734 248 200 28 9 chrX 19621085 19621191 -2801636 + (TA)n Simple_repeat Simple_repeat 1 108 0 1 734 23 54 0 0 chrX 19622367 19622404 -2800423 + AT_rich Low_complexity Low_complexity 1 37 0 1 734 200 267 17 0 chrX 19624039 19624099 -2798728 + GA-rich Low_complexity Low_complexity 5 65 0 1 734 303 28 0 0 chrX 19624175 19624211 -2798616 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 734 24 91 0 0 chrX 19624599 19624665 -2798162 + AT_rich Low_complexity Low_complexity 1 66 0 1 734 186 43 0 0 chrX 19629220 19629243 -2793584 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 734 261 0 0 0 chrX 19633491 19633520 -2789307 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 734 28 0 0 0 chrX 19634226 19634254 -2788573 + AT_rich Low_complexity Low_complexity 1 28 0 1 734 204 40 0 0 chrX 19635505 19635530 -2787297 + (TTATA)n Simple_repeat Simple_repeat 5 29 0 1 734 213 163 0 0 chrX 19637051 19637100 -2785727 + (TTCGG)n Simple_repeat Simple_repeat 1 49 0 1 734 302 98 0 19 chrX 19637373 19637425 -2785402 + (ATTTG)n Simple_repeat Simple_repeat 3 53 0 1 734 202 214 0 0 chrX 19638130 19638172 -2784655 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 734 21 0 0 0 chrX 19639838 19639859 -2782968 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 22 35 0 0 chrX 19639940 19639969 -2782858 + AT_rich Low_complexity Low_complexity 1 29 0 1 734 25 0 0 0 chrX 19642114 19642139 -2780688 + AT_rich Low_complexity Low_complexity 1 25 0 1 734 27 29 0 0 chrX 19644455 19644489 -2778338 + AT_rich Low_complexity Low_complexity 1 34 0 1 734 32 0 0 0 chrX 19645300 19645332 -2777495 + AT_rich Low_complexity Low_complexity 1 32 0 1 734 216 0 0 0 chrX 19646714 19646738 -2776089 + (CAGC)n Simple_repeat Simple_repeat 3 26 0 1 734 180 97 0 0 chrX 19647153 19647184 -2775643 + (CATTT)n Simple_repeat Simple_repeat 4 34 0 1 734 220 171 0 0 chrX 19648187 19648222 -2774605 + (CCTG)n Simple_repeat Simple_repeat 3 37 0 1 734 420 111 0 0 chrX 19648223 19648286 -2774541 + (CTCA)n Simple_repeat Simple_repeat 2 64 0 1 734 201 239 0 0 chrX 19648774 19648820 -2774007 + (CAGA)n Simple_repeat Simple_repeat 3 48 0 1 734 279 0 0 0 chrX 19648823 19648854 -2773973 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 734 201 214 28 14 chrX 19649003 19649074 -2773753 + (CACCAT)n Simple_repeat Simple_repeat 1 72 0 1 734 240 167 0 0 chrX 19649112 19649160 -2773667 + (ATTCG)n Simple_repeat Simple_repeat 3 50 0 1 734 26 30 0 0 chrX 19649428 19649461 -2773366 + AT_rich Low_complexity Low_complexity 1 33 0 1 734 231 36 0 0 chrX 19652845 19652873 -2769954 + (TCC)n Simple_repeat Simple_repeat 1 28 0 1 734 213 39 0 0 chrX 19656756 19656782 -2766045 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1 734 240 35 0 0 chrX 19657779 19657808 -2765019 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 734 217 259 0 17 chrX 19657972 19658031 -2764796 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 1 734 27 49 0 0 chrX 19659215 19659256 -2763571 + AT_rich Low_complexity Low_complexity 1 41 0 1 734 38 39 0 0 chrX 19659654 19659706 -2763121 + AT_rich Low_complexity Low_complexity 1 52 0 1 735 246 81 0 0 chrX 19660939 19660976 -2761851 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1 735 219 36 0 0 chrX 19662639 19662667 -2760160 + (A)n Simple_repeat Simple_repeat 1 28 0 1 735 276 91 0 0 chrX 19662750 19662794 -2760033 + (CAATT)n Simple_repeat Simple_repeat 2 45 0 1 735 207 114 0 0 chrX 19664157 19664192 -2758635 + (T)n Simple_repeat Simple_repeat 1 35 0 1 735 230 242 0 0 chrX 19664863 19664929 -2757898 + A-rich Low_complexity Low_complexity 1 66 0 1 735 237 206 16 16 chrX 19665035 19665099 -2757728 + T-rich Low_complexity Low_complexity 2 65 0 1 735 186 208 0 0 chrX 19665266 19665319 -2757508 + T-rich Low_complexity Low_complexity 2 54 0 1 735 198 0 0 0 chrX 19666464 19666486 -2756341 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 735 275 72 0 23 chrX 19666556 19666599 -2756228 + (CATA)n Simple_repeat Simple_repeat 2 43 0 1 735 189 0 0 0 chrX 19667460 19667481 -2755346 + (GAA)n Simple_repeat Simple_repeat 1 21 0 1 735 324 176 0 0 chrX 19667656 19667724 -2755103 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 735 225 196 0 0 chrX 19668526 19668577 -2754250 + (CTG)n Simple_repeat Simple_repeat 3 53 0 1 735 243 0 0 0 chrX 19669733 19669760 -2753067 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 735 180 152 0 0 chrX 19669904 19669937 -2752890 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1 735 201 135 0 110 chrX 19670303 19670403 -2752424 + (CTTTG)n Simple_repeat Simple_repeat 1 89 0 1 735 349 233 0 0 chrX 19670318 19670391 -2752436 + T-rich Low_complexity Low_complexity 4 76 0 1 735 317 24 0 23 chrX 19670476 19670519 -2752308 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 735 201 162 0 0 chrX 19670698 19670735 -2752092 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 735 26 64 0 0 chrX 19670857 19670904 -2751923 + AT_rich Low_complexity Low_complexity 1 47 0 1 735 27 49 0 0 chrX 19671184 19671225 -2751602 + AT_rich Low_complexity Low_complexity 1 41 0 1 735 198 71 0 0 chrX 19671612 19671640 -2751187 + (TCC)n Simple_repeat Simple_repeat 1 28 0 1 735 186 118 0 0 chrX 19671947 19671981 -2750846 + (CTG)n Simple_repeat Simple_repeat 3 36 0 1 735 265 231 0 0 chrX 19672494 19672572 -2750255 - ROO_I LTR Pao -7538 718 641 1 735 195 139 0 0 chrX 19673051 19673087 -2749740 + (CGG)n Simple_repeat Simple_repeat 3 38 0 1 735 189 0 0 0 chrX 19673184 19673205 -2749622 + (CTG)n Simple_repeat Simple_repeat 1 21 0 1 735 209 302 0 0 chrX 19673219 19673338 -2749489 + (CTG)n Simple_repeat Simple_repeat 3 121 0 1 735 218 309 16 0 chrX 19673662 19673785 -2749042 + (CTG)n Simple_repeat Simple_repeat 1 125 0 1 735 213 39 0 0 chrX 19673884 19673910 -2748917 + (TTG)n Simple_repeat Simple_repeat 3 28 0 1 735 287 150 0 16 chrX 19674081 19674142 -2748685 + (CTG)n Simple_repeat Simple_repeat 1 60 0 1 735 269 247 0 23 chrX 19674396 19674483 -2748344 + (CGG)n Simple_repeat Simple_repeat 1 85 0 1 735 195 42 0 0 chrX 19675782 19675806 -2747021 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1 735 195 42 0 0 chrX 19675971 19675995 -2746832 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1 735 238 177 97 0 chrX 19676017 19676079 -2746748 - ROO_I LTR Pao -7530 726 659 1 735 291 71 0 0 chrX 19676199 19676241 -2746586 + (TCC)n Simple_repeat Simple_repeat 1 42 0 1 735 245 203 24 48 chrX 19676457 19676540 -2746287 + T-rich Low_complexity Low_complexity 5 85 0 1 735 216 185 18 36 chrX 19676928 19676984 -2745843 + CT-rich Low_complexity Low_complexity 1 55 0 1 735 198 0 0 0 chrX 19677039 19677061 -2745766 + (AACTG)n Simple_repeat Simple_repeat 4 25 0 1 735 240 122 0 0 chrX 19677165 19677206 -2745621 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 735 221 89 0 82 chrX 19677788 19677837 -2744990 + (CTTTG)n Simple_repeat Simple_repeat 5 49 0 1 735 23 0 0 0 chrX 19679278 19679301 -2743526 + AT_rich Low_complexity Low_complexity 1 23 0 1 735 213 154 0 0 chrX 19679688 19679727 -2743100 + GA-rich Low_complexity Low_complexity 1 39 0 1 735 22 0 0 0 chrX 19680648 19680670 -2742157 + AT_rich Low_complexity Low_complexity 1 22 0 1 735 306 180 0 0 chrX 19680912 19680973 -2741854 + (CGGA)n Simple_repeat Simple_repeat 4 64 0 1 735 250 121 98 49 chrX 19681719 19681780 -2741047 + Stalker2_LTR LTR Gypsy 233 296 -128 1 735 201 132 0 0 chrX 19682032 19682070 -2740757 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1 735 207 197 0 70 chrX 19682100 19682171 -2740656 + T-rich Low_complexity Low_complexity 4 69 0 1 735 180 77 0 0 chrX 19683770 19683796 -2739031 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 735 183 235 0 0 chrX 19683890 19683941 -2738886 + (CATA)n Simple_repeat Simple_repeat 1 51 0 1 735 25 31 0 0 chrX 19684229 19684261 -2738566 + AT_rich Low_complexity Low_complexity 1 32 0 1 735 26 50 0 0 chrX 19685587 19685627 -2737200 + AT_rich Low_complexity Low_complexity 1 40 0 1 735 243 61 0 0 chrX 19685838 19685871 -2736956 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 735 328 266 0 58 chrX 19685926 19686046 -2736781 + CT-rich Low_complexity Low_complexity 1 113 0 1 735 37 39 0 0 chrX 19686394 19686445 -2736382 + AT_rich Low_complexity Low_complexity 1 51 0 1 735 207 0 0 0 chrX 19686733 19686756 -2736071 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 735 21 0 0 0 chrX 19687197 19687218 -2735609 + AT_rich Low_complexity Low_complexity 1 21 0 1 735 22 35 0 0 chrX 19687294 19687323 -2735504 + AT_rich Low_complexity Low_complexity 1 29 0 1 735 23 86 0 0 chrX 19687357 19687415 -2735412 + AT_rich Low_complexity Low_complexity 1 58 0 1 735 27 0 0 0 chrX 19687460 19687487 -2735340 + AT_rich Low_complexity Low_complexity 1 27 0 1 735 186 43 0 0 chrX 19687683 19687706 -2735121 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 735 25 31 0 0 chrX 19688157 19688189 -2734638 + AT_rich Low_complexity Low_complexity 1 32 0 1 735 411 38 0 0 chrX 19688373 19688426 -2734401 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 735 195 42 0 0 chrX 19688608 19688632 -2734195 + (CTG)n Simple_repeat Simple_repeat 2 25 0 1 735 216 182 0 0 chrX 19688931 19688975 -2733852 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 735 25 75 0 0 chrX 19690423 19690476 -2732351 + AT_rich Low_complexity Low_complexity 1 53 0 1 735 30 27 0 0 chrX 19690552 19690589 -2732238 + AT_rich Low_complexity Low_complexity 1 37 0 1 735 204 97 0 0 chrX 19691394 19691425 -2731402 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 735 3683 2 0 2 chrX 19691439 19691842 -2730985 - STALKER4_LTR LTR Gypsy 0 402 1 1 735 53592 10 3 3 chrX 19691842 19698056 -2724771 - STALKER4_I LTR Gypsy 0 6530 242 1 735 309 96 0 37 chrX 19698230 19698284 -2724543 - STALKER4_I LTR Gypsy -7350 52 1 1 735 3683 2 0 2 chrX 19698288 19698691 -2724136 - STALKER4_LTR LTR Gypsy 0 402 1 1 735 366 74 0 0 chrX 19699866 19699920 -2722907 + (TGG)n Simple_repeat Simple_repeat 1 54 0 1 735 297 0 0 0 chrX 19700960 19700993 -2721834 + (A)n Simple_repeat Simple_repeat 1 33 0 1 735 25 31 0 0 chrX 19701797 19701829 -2720998 + AT_rich Low_complexity Low_complexity 1 32 0 1 735 23 68 0 0 chrX 19701927 19701971 -2720856 + AT_rich Low_complexity Low_complexity 1 44 0 1 735 21 0 0 0 chrX 19702178 19702199 -2720628 + AT_rich Low_complexity Low_complexity 1 21 0 1 735 247 286 0 0 chrX 19703450 19703520 -2719307 + T-rich Low_complexity Low_complexity 1 70 0 1 735 988 98 0 7 chrX 19703943 19704087 -2718740 + DNAREP1_DM LINE Penelope 1 143 -451 1 735 1421 74 129 0 chrX 19704085 19704287 -2718540 + DNAREP1_DM LINE Penelope 367 594 0 1 735 202 274 0 0 chrX 19704896 19704969 -2717858 + T-rich Low_complexity Low_complexity 1 73 0 1 735 25 51 0 0 chrX 19705641 19705680 -2717147 + AT_rich Low_complexity Low_complexity 1 39 0 1 735 245 254 0 0 chrX 19706305 19706364 -2716463 - DNAREP1_DM LINE Penelope -13 581 523 1 735 185 0 40 0 chrX 19707393 19707418 -2715409 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 735 1817 151 181 54 chrX 19707748 19708497 -2714330 - Gypsy12A_LTR LTR Gypsy -1 2279 1436 1 735 1447 87 184 22 chrX 19708537 19708808 -2714019 + DNAREP1_DM LINE Penelope 1 315 -279 1 735 354 223 99 83 chrX 19708811 19708992 -2713835 - Gypsy12A_LTR LTR Gypsy -1285 995 812 1 735 508 249 82 31 chrX 19709083 19709278 -2713549 - Gypsy12A_LTR LTR Gypsy -1605 675 471 1 735 23 0 0 0 chrX 19709468 19709491 -2713336 + AT_rich Low_complexity Low_complexity 1 23 0 1 735 238 211 0 0 chrX 19709607 19709659 -2713168 - DNAREP1_DM LINE Penelope -16 578 527 1 735 26 50 0 0 chrX 19709687 19709727 -2713100 + AT_rich Low_complexity Low_complexity 1 40 0 1 735 252 0 0 0 chrX 19711372 19711400 -2711427 + (TATG)n Simple_repeat Simple_repeat 4 31 0 1 735 26 30 0 0 chrX 19711611 19711644 -2711183 + AT_rich Low_complexity Low_complexity 1 33 0 1 735 258 105 0 0 chrX 19712039 19712077 -2710750 + (CATA)n Simple_repeat Simple_repeat 3 40 0 1 735 312 48 0 0 chrX 19712267 19712309 -2710518 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 735 258 176 0 0 chrX 19712523 19712574 -2710253 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 735 22 0 0 0 chrX 19712692 19712714 -2710113 + AT_rich Low_complexity Low_complexity 1 22 0 1 735 24 53 0 0 chrX 19712864 19712902 -2709925 + AT_rich Low_complexity Low_complexity 1 38 0 1 735 21 0 0 0 chrX 19713196 19713217 -2709610 + AT_rich Low_complexity Low_complexity 1 21 0 1 735 189 175 0 0 chrX 19713513 19713553 -2709274 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 735 247 207 34 11 chrX 19713731 19713819 -2709008 + (TATAA)n Simple_repeat Simple_repeat 4 93 0 1 735 400 192 59 29 chrX 19714278 19714380 -2708447 + BEL_LTR LTR Pao 3 107 -254 1 735 585 133 102 55 chrX 19714680 19714807 -2708020 + DMRT1B LINE R1 4919 5051 -132 1 735 281 299 0 0 chrX 19715658 19715735 -2707092 + TAHRE LINE telomeric 6140 6216 -4247 1 735 243 0 0 0 chrX 19715806 19715833 -2706994 + (TCTA)n Simple_repeat Simple_repeat 1 27 0 1 735 289 232 47 150 chrX 19716063 19716276 -2706551 + TAHRE LINE telomeric 7029 7219 -3244 1 735 23 0 0 0 chrX 19718943 19718966 -2703861 + AT_rich Low_complexity Low_complexity 1 23 0 1 735 213 121 0 0 chrX 19719201 19719234 -2703593 + (A)n Simple_repeat Simple_repeat 1 33 0 1 735 186 133 0 0 chrX 19720564 19720594 -2702233 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 735 345 131 0 0 chrX 19720757 19720818 -2702009 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 735 24 67 0 0 chrX 19722617 19722662 -2700165 + AT_rich Low_complexity Low_complexity 1 45 0 1 735 25 0 0 0 chrX 19722704 19722729 -2700098 + AT_rich Low_complexity Low_complexity 1 25 0 1 735 225 0 0 0 chrX 19722897 19722922 -2699905 + (TATAA)n Simple_repeat Simple_repeat 5 29 0 1 735 206 239 0 0 chrX 19723400 19723446 -2699381 + (CTG)n Simple_repeat Simple_repeat 3 48 0 1 735 240 35 0 0 chrX 19725186 19725215 -2697612 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 735 25 0 0 0 chrX 19726023 19726048 -2696779 + AT_rich Low_complexity Low_complexity 1 25 0 1 735 402 132 0 0 chrX 19729983 19730059 -2692768 + (CTG)n Simple_repeat Simple_repeat 3 78 0 1 735 204 40 0 0 chrX 19730689 19730714 -2692113 + (TCG)n Simple_repeat Simple_repeat 1 25 0 1 735 221 200 22 0 chrX 19732577 19732622 -2690205 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 1 735 329 156 13 0 chrX 19732752 19732829 -2689998 + T-rich Low_complexity Low_complexity 1 78 0 1 735 225 196 0 0 chrX 19735502 19735553 -2687274 + (CAT)n Simple_repeat Simple_repeat 1 51 0 1 735 180 0 0 0 chrX 19735641 19735661 -2687166 + (TTTCG)n Simple_repeat Simple_repeat 1 20 0 1 735 25 31 0 0 chrX 19738923 19738955 -2683872 + AT_rich Low_complexity Low_complexity 1 32 0 1 735 228 162 14 68 chrX 19739862 19739935 -2682892 + (CAAAG)n Simple_repeat Simple_repeat 2 70 0 1 735 26 30 0 0 chrX 19742269 19742302 -2680525 + AT_rich Low_complexity Low_complexity 1 33 0 1 735 256 253 12 12 chrX 19742382 19742462 -2680365 + (TTCCG)n Simple_repeat Simple_repeat 1 80 0 1 735 40 21 0 0 chrX 19742959 19743006 -2679821 + AT_rich Low_complexity Low_complexity 1 47 0 1 735 282 229 0 0 chrX 19744926 19745022 -2677805 + (TTG)n Simple_repeat Simple_repeat 3 98 0 1 735 192 40 0 0 chrX 19745117 19745142 -2677685 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 735 23 0 0 0 chrX 19745315 19745338 -2677489 + AT_rich Low_complexity Low_complexity 1 23 0 1 735 252 59 0 0 chrX 19750054 19750088 -2672739 + (CTAA)n Simple_repeat Simple_repeat 1 34 0 1 735 211 237 34 0 chrX 19760404 19760463 -2662364 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 735 186 150 0 0 chrX 19760637 19760677 -2662150 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 735 180 246 0 0 chrX 19761046 19761115 -2661712 + (TTG)n Simple_repeat Simple_repeat 1 69 0 1 735 22 0 0 0 chrX 19761582 19761604 -2661223 + AT_rich Low_complexity Low_complexity 1 22 0 1 735 417 19 92 18 chrX 19761808 19761917 -2660910 + (TTATA)n Simple_repeat Simple_repeat 5 121 0 1 735 189 226 0 0 chrX 19762488 19762541 -2660286 + (CGG)n Simple_repeat Simple_repeat 1 53 0 1 735 253 311 0 0 chrX 19763523 19763658 -2659169 + C-rich Low_complexity Low_complexity 1 135 0 1 735 244 204 0 0 chrX 19764021 19764070 -2658757 + GA-rich Low_complexity Low_complexity 3 51 0 1 735 222 37 0 0 chrX 19764830 19764857 -2657970 + (GGAGAA)n Simple_repeat Simple_repeat 5 31 0 1 735 247 189 0 19 chrX 19765987 19766041 -2656786 + (CCG)n Simple_repeat Simple_repeat 2 54 0 1 735 1642 72 439 21 chrX 19766713 19767131 -2655696 + DNAREP1_DM LINE Penelope 1 594 0 1 735 22 35 0 0 chrX 19767701 19767730 -2655097 + AT_rich Low_complexity Low_complexity 1 29 0 1 735 27 0 0 0 chrX 19767876 19767903 -2654924 + AT_rich Low_complexity Low_complexity 1 27 0 1 735 226 226 0 0 chrX 19768073 19768126 -2654701 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 735 189 107 0 0 chrX 19768963 19768991 -2653836 + (CCA)n Simple_repeat Simple_repeat 2 29 0 1 735 198 103 0 0 chrX 19769509 19769538 -2653289 + (AACTG)n Simple_repeat Simple_repeat 3 31 0 1 735 23 0 0 0 chrX 19770310 19770333 -2652494 + AT_rich Low_complexity Low_complexity 1 23 0 1 735 283 44 44 0 chrX 19770678 19770723 -2652104 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 735 236 250 16 0 chrX 19771194 19771258 -2651569 + (CTG)n Simple_repeat Simple_repeat 3 67 0 1 735 216 135 0 0 chrX 19773626 19773663 -2649164 + (CGAAT)n Simple_repeat Simple_repeat 1 37 0 1 735 197 33 33 0 chrX 19774451 19774481 -2648346 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1 735 351 44 0 0 chrX 19774841 19774886 -2647941 + (CAG)n Simple_repeat Simple_repeat 1 45 0 1 735 201 162 0 0 chrX 19776141 19776178 -2646649 + T-rich Low_complexity Low_complexity 1 37 0 1 735 25 51 0 0 chrX 19776691 19776730 -2646097 + AT_rich Low_complexity Low_complexity 1 39 0 1 735 208 135 0 0 chrX 19777256 19777293 -2645534 + (CAG)n Simple_repeat Simple_repeat 1 37 0 1 735 197 200 36 0 chrX 19777324 19777379 -2645448 + (CATA)n Simple_repeat Simple_repeat 4 60 0 1 735 203 105 53 0 chrX 19779228 19779266 -2643561 + (CATATA)n Simple_repeat Simple_repeat 4 43 0 1 735 209 239 27 27 chrX 19780032 19780105 -2642722 + A-rich Low_complexity Low_complexity 2 74 0 1 735 22 35 0 0 chrX 19781891 19781920 -2640907 + AT_rich Low_complexity Low_complexity 1 29 0 1 735 213 282 0 13 chrX 19781942 19782021 -2640806 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 735 26 0 0 0 chrX 19782326 19782352 -2640475 + AT_rich Low_complexity Low_complexity 1 26 0 1 735 225 94 0 0 chrX 19783075 19783107 -2639720 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 735 201 147 0 0 chrX 19783211 19783245 -2639582 + (GGATG)n Simple_repeat Simple_repeat 3 36 0 1 735 205 138 0 0 chrX 19783276 19783305 -2639522 + (CGG)n Simple_repeat Simple_repeat 2 30 0 1 735 186 43 0 0 chrX 19783537 19783560 -2639267 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 735 234 0 0 0 chrX 19784142 19784168 -2638659 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 735 225 196 0 0 chrX 19784323 19784369 -2638458 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1 735 224 208 0 20 chrX 19784904 19784953 -2637874 + (CGAGT)n Simple_repeat Simple_repeat 1 48 0 1 735 31 0 0 0 chrX 19785886 19785917 -2636910 + AT_rich Low_complexity Low_complexity 1 31 0 1 735 206 174 0 21 chrX 19786161 19786208 -2636619 + (TCG)n Simple_repeat Simple_repeat 2 47 0 1 735 36 0 0 0 chrX 19786631 19786667 -2636160 + AT_rich Low_complexity Low_complexity 1 36 0 1 735 26 64 0 0 chrX 19786918 19786965 -2635862 + AT_rich Low_complexity Low_complexity 1 47 0 1 735 229 280 0 47 chrX 19787382 19787468 -2635359 + (TATG)n Simple_repeat Simple_repeat 4 85 0 1 735 252 293 0 0 chrX 19788506 19788581 -2634246 + DNAREP1_DM LINE Penelope 437 511 -83 1 735 231 125 0 0 chrX 19788930 19788970 -2633857 + (TCTG)n Simple_repeat Simple_repeat 4 43 0 1 735 204 222 0 0 chrX 19789439 19789484 -2633343 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 1 735 183 186 0 0 chrX 19789596 19789639 -2633188 + A-rich Low_complexity Low_complexity 1 43 0 1 735 216 0 0 0 chrX 19790163 19790187 -2632640 + (A)n Simple_repeat Simple_repeat 1 24 0 1 735 201 182 0 0 chrX 19791361 19791394 -2631433 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 735 189 121 0 0 chrX 19791631 19791664 -2631163 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 736 22 0 0 0 chrX 19792613 19792635 -2630192 + AT_rich Low_complexity Low_complexity 1 22 0 1 736 227 226 16 16 chrX 19793210 19793273 -2629554 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 1 736 290 244 6 0 chrX 19793554 19793726 -2629101 + (CAG)n Simple_repeat Simple_repeat 1 173 0 1 736 220 248 25 25 chrX 19795294 19795414 -2627413 + (CAG)n Simple_repeat Simple_repeat 3 122 0 1 736 357 109 0 0 chrX 19796040 19796095 -2626732 + (CAG)n Simple_repeat Simple_repeat 2 56 0 1 736 296 235 0 0 chrX 19796184 19796265 -2626562 + ROO_I LTR Pao 651 731 -7525 1 736 231 277 10 21 chrX 19797206 19797302 -2625525 + (CAG)n Simple_repeat Simple_repeat 3 97 0 1 736 270 56 0 0 chrX 19799407 19799443 -2623384 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 736 22 35 0 0 chrX 19800562 19800591 -2622236 + AT_rich Low_complexity Low_complexity 1 29 0 1 736 183 100 0 0 chrX 19800764 19800794 -2622033 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 736 267 133 0 0 chrX 19801183 19801228 -2621599 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 736 403 151 21 0 chrX 19801381 19801474 -2621353 + (TA)n Simple_repeat Simple_repeat 1 95 0 1 736 236 228 202 0 chrX 19802490 19802569 -2620258 + DNAREP1_DM LINE Penelope 444 538 -56 1 736 31 26 0 0 chrX 19802591 19802629 -2620198 + AT_rich Low_complexity Low_complexity 1 38 0 1 736 3116 178 143 9 chrX 19804603 19805397 -2617430 - LINEJ1_DM LINE Jockey -213 4807 3908 1 736 3536 102 4 10 chrX 19805415 19805929 -2616898 + DMRT1C LINE R1 3633 4143 -1300 1 736 257 118 0 0 chrX 19805927 19805961 -2616866 + DMRT1C LINE R1 4316 4349 -1094 1 736 3591 139 170 1 chrX 19805982 19806659 -2616168 + DMRT1C LINE R1 4653 5443 0 1 736 236 228 202 0 chrX 19807654 19807733 -2615094 + DNAREP1_DM LINE Penelope 444 538 -56 1 736 31 26 0 0 chrX 19807755 19807793 -2615034 + AT_rich Low_complexity Low_complexity 1 38 0 1 736 3116 178 143 9 chrX 19809767 19810561 -2612266 - LINEJ1_DM LINE Jockey -213 4807 3908 1 736 3536 102 4 10 chrX 19810579 19811093 -2611734 + DMRT1C LINE R1 3633 4143 -1300 1 736 257 118 0 0 chrX 19811091 19811125 -2611702 + DMRT1C LINE R1 4316 4349 -1094 1 736 3591 139 170 1 chrX 19811146 19811823 -2611004 + DMRT1C LINE R1 4653 5443 0 1 736 31 26 0 0 chrX 19812919 19812957 -2609870 + AT_rich Low_complexity Low_complexity 1 38 0 1 736 251 253 11 11 chrX 19814816 19814904 -2607923 - Invader2_I LTR Gypsy -183 4409 4322 1 736 1518 108 126 96 chrX 19815020 19815365 -2607462 - STALKER4_LTR LTR Gypsy 0 372 69 1 736 382 290 21 6 chrX 19815443 19815609 -2607218 - Invader2_I LTR Gypsy -639 3953 3846 1 736 37287 1 0 0 chrX 19815605 19819644 -2603183 + FW_DM LINE Jockey 654 4692 0 1 736 2261 284 73 72 chrX 19819687 19821016 -2601811 - MDG3_I LTR Gypsy -962 4024 2694 1 736 3105 179 143 9 chrX 19823662 19824456 -2598371 - LINEJ1_DM LINE Jockey -213 4807 3908 1 736 3555 98 4 10 chrX 19824474 19824988 -2597839 + DMRT1C LINE R1 3633 4143 -1300 1 736 257 118 0 0 chrX 19824986 19825020 -2597807 + DMRT1C LINE R1 4316 4349 -1094 1 736 2159 140 168 1 chrX 19825041 19825718 -2597109 + DMRT1C LINE R1 4653 5443 0 1 736 236 228 202 0 chrX 19826713 19826792 -2596035 + DNAREP1_DM LINE Penelope 444 538 -56 1 736 31 26 0 0 chrX 19826814 19826852 -2595975 + AT_rich Low_complexity Low_complexity 1 38 0 1 736 251 253 11 11 chrX 19828673 19828761 -2594066 - Invader2_I LTR Gypsy -183 4409 4322 1 736 1484 116 126 96 chrX 19828877 19829222 -2593605 - STALKER4_LTR LTR Gypsy 0 372 69 1 736 2459 296 68 63 chrX 19829286 19830832 -2591995 - MDG3_I LTR Gypsy -740 4246 2694 1 736 3091 180 143 9 chrX 19833478 19834272 -2588555 - LINEJ1_DM LINE Jockey -213 4807 3908 1 736 3518 98 4 10 chrX 19834290 19834804 -2588023 + DMRT1C LINE R1 3633 4143 -1300 1 736 256 118 0 0 chrX 19834802 19834836 -2587991 + DMRT1C LINE R1 4316 4349 -1094 1 736 2148 140 168 1 chrX 19834857 19835534 -2587293 + DMRT1C LINE R1 4653 5443 0 1 736 236 228 202 0 chrX 19836529 19836608 -2586219 + DNAREP1_DM LINE Penelope 444 538 -56 1 736 31 26 0 0 chrX 19836630 19836668 -2586159 + AT_rich Low_complexity Low_complexity 1 38 0 1 736 256 253 11 11 chrX 19838525 19838613 -2584214 - Invader2_I LTR Gypsy -183 4409 4322 1 736 1528 108 126 96 chrX 19838729 19839074 -2583753 - STALKER4_LTR LTR Gypsy 0 372 69 1 736 2543 291 65 69 chrX 19839212 19840687 -2582140 - MDG3_I LTR Gypsy -824 4162 2694 1 736 256 253 11 11 chrX 19843255 19843343 -2579484 - Invader2_I LTR Gypsy -183 4409 4322 1 736 1528 108 126 96 chrX 19843459 19843804 -2579023 - STALKER4_LTR LTR Gypsy 0 372 69 1 736 2542 292 71 70 chrX 19843868 19845420 -2577407 - MDG3_I LTR Gypsy -740 4246 2694 1 736 256 253 11 11 chrX 19847990 19848078 -2574749 - Invader2_I LTR Gypsy -183 4409 4322 1 736 1528 108 126 96 chrX 19848194 19848539 -2574288 - STALKER4_LTR LTR Gypsy 0 372 69 1 736 2557 291 71 70 chrX 19848603 19850155 -2572672 - MDG3_I LTR Gypsy -740 4246 2694 1 736 273 169 0 0 chrX 19854353 19854412 -2568415 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 736 194 83 56 0 chrX 19854502 19854538 -2568289 + (CATA)n Simple_repeat Simple_repeat 2 39 0 1 736 1398 88 62 36 chrX 19854782 19855007 -2567820 + DNAREP1_DM LINE Penelope 362 592 -2 1 736 248 102 0 20 chrX 19855666 19855716 -2567111 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 736 354 100 0 0 chrX 19861944 19862004 -2560823 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 736 25 31 0 0 chrX 19863179 19863211 -2559616 + AT_rich Low_complexity Low_complexity 1 32 0 1 736 281 93 19 0 chrX 19864456 19864510 -2558317 + (TGG)n Simple_repeat Simple_repeat 2 56 0 1 736 333 159 0 0 chrX 19865640 19865703 -2557124 + (TTA)n Simple_repeat Simple_repeat 2 64 0 1 736 216 0 0 0 chrX 19869148 19869172 -2553655 + (GCTTG)n Simple_repeat Simple_repeat 4 27 0 1 736 23 0 0 0 chrX 19873049 19873072 -2549755 + AT_rich Low_complexity Low_complexity 1 23 0 1 736 24 0 0 0 chrX 19873176 19873200 -2549627 + AT_rich Low_complexity Low_complexity 1 24 0 1 736 210 118 0 0 chrX 19873901 19873935 -2548892 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 736 213 94 0 0 chrX 19875074 19875106 -2547721 + (CCA)n Simple_repeat Simple_repeat 1 32 0 1 736 234 0 0 0 chrX 19876217 19876243 -2546584 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 736 204 200 0 0 chrX 19876772 19876812 -2546015 + (GCTG)n Simple_repeat Simple_repeat 2 41 0 1 736 32 0 0 0 chrX 19878058 19878090 -2544737 + AT_rich Low_complexity Low_complexity 1 32 0 1 736 32 0 0 0 chrX 19878375 19878407 -2544420 + AT_rich Low_complexity Low_complexity 1 32 0 1 736 21 0 0 0 chrX 19878515 19878536 -2544291 + AT_rich Low_complexity Low_complexity 1 21 0 1 736 288 53 0 0 chrX 19881426 19881464 -2541363 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1 736 198 118 0 0 chrX 19883431 19883465 -2539362 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 736 297 145 0 0 chrX 19883563 19883625 -2539202 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 736 217 205 0 0 chrX 19883696 19883735 -2539092 + (CAGG)n Simple_repeat Simple_repeat 1 39 0 1 736 225 65 0 0 chrX 19884159 19884190 -2538637 + (CGAAT)n Simple_repeat Simple_repeat 1 31 0 1 736 180 0 0 0 chrX 19885479 19885499 -2537328 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 736 272 177 0 31 chrX 19887208 19887272 -2535555 + (TATG)n Simple_repeat Simple_repeat 1 62 0 1 736 183 42 0 0 chrX 19887890 19887914 -2534913 + (TTTTTG)n Simple_repeat Simple_repeat 5 28 0 1 736 266 73 24 0 chrX 19889963 19890004 -2532823 + (CAAGC)n Simple_repeat Simple_repeat 3 44 0 1 736 24 53 0 0 chrX 19892528 19892566 -2530261 + AT_rich Low_complexity Low_complexity 1 38 0 1 736 1649 101 167 11 chrX 19892834 19893115 -2529712 + DNAREP1_DM LINE Penelope 270 594 0 1 736 254 259 11 11 chrX 19893869 19893959 -2528868 + (TG)n Simple_repeat Simple_repeat 1 90 0 1 736 26 30 0 0 chrX 19895007 19895040 -2527787 + AT_rich Low_complexity Low_complexity 1 33 0 1 736 210 71 0 0 chrX 19896984 19897012 -2525815 + (TGG)n Simple_repeat Simple_repeat 3 30 0 1 736 26 30 0 0 chrX 19897894 19897927 -2524900 + AT_rich Low_complexity Low_complexity 1 33 0 1 736 243 122 0 0 chrX 19899363 19899412 -2523415 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 736 291 54 0 0 chrX 19899940 19899977 -2522850 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 736 228 35 0 0 chrX 19903479 19903508 -2519319 + (TTCGG)n Simple_repeat Simple_repeat 1 29 0 1 736 252 100 0 0 chrX 19906694 19906734 -2516093 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 736 216 303 0 11 chrX 19907854 19907944 -2514883 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 736 270 0 0 0 chrX 19908015 19908045 -2514782 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 736 201 39 0 0 chrX 19909266 19909292 -2513535 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 736 21 71 0 0 chrX 19910278 19910320 -2512507 + AT_rich Low_complexity Low_complexity 1 42 0 1 736 21 0 0 0 chrX 19910614 19910635 -2512192 + AT_rich Low_complexity Low_complexity 1 21 0 1 736 189 0 0 0 chrX 19911694 19911715 -2511112 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 736 428 48 0 16 chrX 19911943 19912007 -2510820 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 736 341 136 15 0 chrX 19913205 19913271 -2509556 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 736 201 94 0 0 chrX 19916287 19916319 -2506508 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 736 228 86 0 0 chrX 19917455 19917490 -2505337 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 736 204 233 0 0 chrX 19918206 19918279 -2504548 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 736 339 173 0 0 chrX 19919861 19919942 -2502885 + (CAGT)n Simple_repeat Simple_repeat 1 81 0 1 736 321 271 24 16 chrX 19922748 19922872 -2499955 + (CTG)n Simple_repeat Simple_repeat 3 127 0 1 737 255 161 0 0 chrX 19923998 19924054 -2498773 + (CAACT)n Simple_repeat Simple_repeat 2 57 0 1 737 22 0 0 0 chrX 19924987 19925009 -2497818 + AT_rich Low_complexity Low_complexity 1 22 0 1 737 180 0 0 0 chrX 19926312 19926332 -2496495 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 737 204 245 0 0 chrX 19927354 19927403 -2495424 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 737 3605 5 7 7 chrX 19927403 19927817 -2495010 + DM297_LTR LTR Gypsy 1 414 0 1 737 17207 5 0 1 chrX 19927817 19929771 -2493056 + DM297_I LTR Gypsy 1 1953 -4214 1 737 6593 15 0 0 chrX 19929755 19930553 -2492274 + DM297_I LTR Gypsy 5370 6167 0 1 737 3566 5 10 7 chrX 19930553 19930966 -2491861 + DM297_LTR LTR Gypsy 1 414 0 1 737 213 108 0 0 chrX 19931180 19931217 -2491610 + (T)n Simple_repeat Simple_repeat 1 37 0 1 737 23 0 0 0 chrX 19935638 19935661 -2487166 + AT_rich Low_complexity Low_complexity 1 23 0 1 737 324 48 0 0 chrX 19936617 19936659 -2486168 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 737 180 0 0 0 chrX 19937009 19937029 -2485798 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 737 231 61 0 0 chrX 19937037 19937070 -2485757 + (ATTCG)n Simple_repeat Simple_repeat 5 37 0 1 737 225 94 0 0 chrX 19939436 19939468 -2483359 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 737 248 53 0 26 chrX 19946732 19946771 -2476056 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 737 236 172 17 0 chrX 19948456 19948514 -2474313 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 737 192 40 0 0 chrX 19949463 19949488 -2473339 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 737 257 212 25 12 chrX 19949550 19949631 -2473196 + (CA)n Simple_repeat Simple_repeat 1 82 0 1 737 186 43 0 0 chrX 19951161 19951184 -2471643 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 737 189 74 0 0 chrX 19951994 19952021 -2470806 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 1 737 198 71 0 0 chrX 19952795 19952823 -2470004 + (TGGA)n Simple_repeat Simple_repeat 2 29 0 1 737 26 98 0 0 chrX 19953238 19953320 -2469507 + AT_rich Low_complexity Low_complexity 1 82 0 1 737 279 104 0 0 chrX 19954087 19954135 -2468692 + (CAGAA)n Simple_repeat Simple_repeat 3 50 0 1 737 295 161 89 0 chrX 19954752 19954808 -2468019 + DNAREP1_DM LINE Penelope 1 61 -533 1 737 459 197 220 0 chrX 19954870 19955002 -2467825 + DNAREP1_DM LINE Penelope 431 591 -3 1 737 195 100 0 0 chrX 19956526 19956556 -2466271 + (CAGTT)n Simple_repeat Simple_repeat 4 33 0 1 737 354 23 0 0 chrX 19958657 19958700 -2464127 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 737 27 0 0 0 chrX 19960209 19960236 -2462591 + AT_rich Low_complexity Low_complexity 1 27 0 1 737 313 129 14 14 chrX 19960359 19960430 -2462397 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 737 199 114 45 0 chrX 19960726 19960770 -2462057 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 737 201 246 0 0 chrX 19961221 19961286 -2461541 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 737 213 39 0 0 chrX 19962102 19962128 -2460699 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 737 351 105 0 0 chrX 19966147 19966204 -2456623 + (GTATG)n Simple_repeat Simple_repeat 4 60 0 1 737 279 79 0 0 chrX 19966417 19966455 -2456372 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 737 213 154 0 25 chrX 19969895 19969935 -2452892 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 737 29 0 0 0 chrX 19970517 19970546 -2452281 + AT_rich Low_complexity Low_complexity 1 29 0 1 737 213 39 0 0 chrX 19972418 19972444 -2450383 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 737 21 36 0 0 chrX 19975057 19975085 -2447742 + AT_rich Low_complexity Low_complexity 1 28 0 1 737 192 179 0 0 chrX 19975930 19975969 -2446858 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 737 216 261 14 0 chrX 19976141 19976210 -2446617 + (TGAG)n Simple_repeat Simple_repeat 1 70 0 1 737 222 37 0 0 chrX 19977756 19977783 -2445044 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 737 285 75 0 0 chrX 19978131 19978171 -2444656 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 737 22 0 0 0 chrX 19979101 19979123 -2443704 + AT_rich Low_complexity Low_complexity 1 22 0 1 737 21 36 0 0 chrX 19980247 19980275 -2442552 + AT_rich Low_complexity Low_complexity 1 28 0 1 737 259 246 16 0 chrX 19981661 19981722 -2441105 + (GCCTAA)n Simple_repeat Simple_repeat 4 65 0 1 737 309 109 0 0 chrX 19982067 19982113 -2440714 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 737 243 157 0 0 chrX 19982825 19982876 -2439951 + (CATCG)n Simple_repeat Simple_repeat 1 51 0 1 737 238 196 0 0 chrX 19985710 19985761 -2437066 + (ATG)n Simple_repeat Simple_repeat 1 51 0 1 737 814 178 192 43 chrX 19987498 19987963 -2434864 + DNAREP1_DM LINE Penelope 1 594 0 1 737 253 127 218 0 chrX 19988083 19988138 -2434689 - DNAREP1_DM LINE Penelope -371 223 157 1 737 374 208 13 0 chrX 19989875 19989952 -2432875 - DNAREP1_DM LINE Penelope -516 78 1 1 737 29 0 0 0 chrX 19990137 19990166 -2432661 + AT_rich Low_complexity Low_complexity 1 29 0 1 737 459 328 17 42 chrX 19990553 19990789 -2432038 + DIVER2_I LTR Pao 1591 1820 -2327 1 737 213 132 0 0 chrX 19991430 19991468 -2431359 + (CAGAC)n Simple_repeat Simple_repeat 5 42 0 1 737 234 188 0 0 chrX 19991574 19991622 -2431205 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 737 225 0 0 0 chrX 19992127 19992152 -2430675 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 737 865 167 40 0 chrX 19994020 19994170 -2428657 - BEL_I LTR Pao -1028 4376 4221 1 737 12235 145 114 13 chrX 19994212 19996539 -2426288 - BEL_I LTR Pao -1294 4110 1548 1 737 2011 151 82 12 chrX 19996594 19996937 -2425890 - BEL_I LTR Pao -4107 1297 931 1 737 333 214 12 12 chrX 19996940 19997025 -2425802 - BEL_LTR LTR Pao -108 253 169 1 737 242 259 0 0 chrX 19998906 19998964 -2423863 + (CAG)n Simple_repeat Simple_repeat 1 58 0 1 737 257 213 0 9 chrX 19999768 19999877 -2422950 + (TG)n Simple_repeat Simple_repeat 1 108 0 1 737 21 36 0 0 chrX 20001005 20001033 -2421794 + AT_rich Low_complexity Low_complexity 1 28 0 1 737 23 0 0 0 chrX 20001344 20001367 -2421460 + AT_rich Low_complexity Low_complexity 1 23 0 1 737 219 36 0 0 chrX 20002993 20003021 -2419806 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 737 440 271 7 15 chrX 20005073 20005208 -2417619 + DIVER2_I LTR Pao 1317 1450 -2697 1 737 433 333 5 31 chrX 20005352 20005547 -2417280 + DIVER2_I LTR Pao 1645 1834 -2313 1 737 249 250 37 46 chrX 20005969 20006078 -2416749 - DNAREP1_DM LINE Penelope -486 108 1 1 737 427 148 62 0 chrX 20006124 20006205 -2416622 + DNAREP1_DM LINE Penelope 498 583 -11 1 737 210 207 33 44 chrX 20006263 20006354 -2416473 + (TTATA)n Simple_repeat Simple_repeat 4 93 0 1 737 263 146 18 0 chrX 20007204 20007259 -2415568 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 737 25 65 0 0 chrX 20007390 20007436 -2415391 + AT_rich Low_complexity Low_complexity 1 46 0 1 737 26 30 0 0 chrX 20008594 20008627 -2414200 + AT_rich Low_complexity Low_complexity 1 33 0 1 737 192 111 0 0 chrX 20009910 20009946 -2412881 + (T)n Simple_repeat Simple_repeat 1 36 0 1 737 235 237 0 13 chrX 20012140 20012217 -2410610 + (TCTG)n Simple_repeat Simple_repeat 4 79 0 1 737 302 107 0 18 chrX 20015317 20015374 -2407453 + (TTA)n Simple_repeat Simple_repeat 3 58 0 1 737 359 178 68 106 chrX 20015823 20015955 -2406872 - DNAREP1_DM LINE Penelope -37 557 431 1 737 275 170 0 70 chrX 20016132 20016189 -2406638 - DNAREP1_DM LINE Penelope -536 58 6 1 737 225 0 0 0 chrX 20018851 20018876 -2403951 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 737 186 43 0 0 chrX 20023576 20023599 -2399228 + (AACTG)n Simple_repeat Simple_repeat 3 25 0 1 737 23 0 0 0 chrX 20024744 20024767 -2398060 + AT_rich Low_complexity Low_complexity 1 23 0 1 737 219 65 65 0 chrX 20027068 20027114 -2395713 + (TAA)n Simple_repeat Simple_repeat 1 49 0 1 737 227 184 0 0 chrX 20027781 20027830 -2394997 + T-rich Low_complexity Low_complexity 1 49 0 1 737 266 125 0 20 chrX 20027947 20027996 -2394831 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 1 737 24 32 0 0 chrX 20028823 20028854 -2393973 + AT_rich Low_complexity Low_complexity 1 31 0 1 737 231 203 0 48 chrX 20029149 20029211 -2393616 + C-rich Low_complexity Low_complexity 5 63 0 1 737 21 36 0 0 chrX 20029631 20029659 -2393168 + AT_rich Low_complexity Low_complexity 1 28 0 1 737 216 86 0 0 chrX 20030357 20030392 -2392435 + (CAG)n Simple_repeat Simple_repeat 1 35 0 1 737 216 278 18 27 chrX 20030497 20030608 -2392219 + (CAG)n Simple_repeat Simple_repeat 3 112 0 1 737 233 167 0 0 chrX 20030793 20030853 -2391974 + ROO_I LTR Pao 675 734 -7522 1 737 247 274 0 0 chrX 20031504 20031588 -2391239 + (CAG)n Simple_repeat Simple_repeat 3 86 0 1 737 346 172 0 33 chrX 20031649 20031739 -2391088 + ROO_I LTR Pao 652 738 -7518 1 737 227 98 0 105 chrX 20032246 20032303 -2390524 + ROO_I LTR Pao 676 726 -7530 1 737 205 300 0 0 chrX 20032414 20032474 -2390353 + (CAG)n Simple_repeat Simple_repeat 2 61 0 1 737 1459 127 74 37 chrX 20034420 20034691 -2388136 - PROTOP_B DNA P -872 281 1 1 737 29 0 0 0 chrX 20035485 20035514 -2387313 + AT_rich Low_complexity Low_complexity 1 29 0 1 737 372 208 13 0 chrX 20035699 20035776 -2387051 + DNAREP1_DM LINE Penelope 1 78 -516 1 737 248 127 218 0 chrX 20037513 20037568 -2385259 + DNAREP1_DM LINE Penelope 157 223 -371 1 737 1281 189 154 47 chrX 20037691 20038173 -2384654 - DNAREP1_DM LINE Penelope -1 593 2 1 737 263 297 17 17 chrX 20038186 20038306 -2384521 - I_DM LINE I -3946 2285 2166 1 737 237 86 29 0 chrX 20039500 20039535 -2383292 + PROTOP_B DNA P 506 541 -612 1 737 24 53 0 0 chrX 20039604 20039642 -2383185 + AT_rich Low_complexity Low_complexity 1 38 0 1 737 192 152 0 0 chrX 20041545 20041578 -2381249 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 1 737 201 39 0 0 chrX 20042044 20042070 -2380757 + (CAGAG)n Simple_repeat Simple_repeat 3 28 0 1 737 22 56 0 0 chrX 20042406 20042442 -2380385 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 222 37 0 0 chrX 20043590 20043617 -2379210 + (TCTCG)n Simple_repeat Simple_repeat 2 28 0 1 737 344 0 65 0 chrX 20044457 20044503 -2378324 + (TATAG)n Simple_repeat Simple_repeat 2 50 0 1 737 30 27 0 0 chrX 20045686 20045723 -2377104 + AT_rich Low_complexity Low_complexity 1 37 0 1 737 207 114 0 0 chrX 20045982 20046017 -2376810 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 737 227 266 0 0 chrX 20046590 20046654 -2376173 + DNAREP1_DM LINE Penelope 344 407 -187 1 737 384 77 0 0 chrX 20047662 20047714 -2375113 + (CAT)n Simple_repeat Simple_repeat 1 52 0 1 737 288 127 0 0 chrX 20049778 20049833 -2372994 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 737 180 125 0 0 chrX 20050994 20051026 -2371801 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 737 255 61 0 0 chrX 20051544 20051577 -2371250 + (CCG)n Simple_repeat Simple_repeat 1 33 0 1 737 192 97 0 0 chrX 20053144 20053175 -2369652 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 737 249 146 0 0 chrX 20053277 20053325 -2369502 + (TTG)n Simple_repeat Simple_repeat 3 50 0 1 737 212 149 21 0 chrX 20053646 20053693 -2369134 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 92 23 33 0 0 chrX 20054010 20054040 -2368787 + AT_rich Low_complexity Low_complexity 1 30 0 1 738 25 31 0 0 chrX 20054385 20054417 -2368410 + AT_rich Low_complexity Low_complexity 1 32 0 1 738 24 32 0 0 chrX 20056877 20056908 -2365919 + AT_rich Low_complexity Low_complexity 1 31 0 1 738 233 103 0 194 chrX 20059245 20059317 -2363510 + DNAREP1_DM LINE Penelope 473 530 -64 1 738 216 135 0 0 chrX 20068382 20068419 -2354408 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 738 21 0 0 0 chrX 20070072 20070093 -2352734 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 4746 136 31 26 chrX 20073786 20074686 -2348141 + DMRT1C LINE R1 2118 3022 -2421 1 738 854 71 0 0 chrX 20074687 20074799 -2348028 + DMRT1C LINE R1 4367 4478 -965 1 738 5490 49 68 0 chrX 20074797 20075530 -2347297 + DMRT1C LINE R1 4659 5441 -2 1 738 21 0 0 0 chrX 20077883 20077904 -2344923 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 5493 83 56 67 chrX 20081658 20082573 -2340254 + DMRT1C LINE R1 2118 3022 -2421 1 738 861 71 0 0 chrX 20082574 20082686 -2340141 + DMRT1C LINE R1 4367 4478 -965 1 738 5512 46 68 0 chrX 20082684 20083417 -2339410 + DMRT1C LINE R1 4659 5441 -2 1 738 21 0 0 0 chrX 20085600 20085621 -2337206 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 4767 136 31 26 chrX 20089345 20090245 -2332582 + DMRT1C LINE R1 2118 3022 -2421 1 738 854 71 0 0 chrX 20090246 20090358 -2332469 + DMRT1C LINE R1 4367 4478 -965 1 738 5490 49 68 0 chrX 20090356 20091089 -2331738 + DMRT1C LINE R1 4659 5441 -2 1 738 21 0 0 0 chrX 20093442 20093463 -2329364 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 5521 82 56 67 chrX 20097205 20098120 -2324707 + DMRT1C LINE R1 2118 3022 -2421 1 738 854 71 0 0 chrX 20098121 20098233 -2324594 + DMRT1C LINE R1 4367 4478 -965 1 738 5519 46 68 0 chrX 20098231 20098966 -2323861 + DMRT1C LINE R1 4659 5443 0 1 738 21 0 0 0 chrX 20101316 20101337 -2321490 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 258 180 0 0 chrX 20102076 20102137 -2320690 + GA-rich Low_complexity Low_complexity 1 61 0 1 738 186 71 0 0 chrX 20102618 20102646 -2320181 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 738 180 125 0 0 chrX 20102918 20102950 -2319877 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 738 31 0 0 0 chrX 20107575 20107606 -2315221 + AT_rich Low_complexity Low_complexity 1 31 0 1 738 298 0 48 0 chrX 20107649 20107691 -2315136 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 738 62 36 0 0 chrX 20107691 20107774 -2315053 + AT_rich Low_complexity Low_complexity 1 83 0 1 738 233 214 0 0 chrX 20108231 20108273 -2314554 + (TATG)n Simple_repeat Simple_repeat 4 45 0 1 738 357 197 0 0 chrX 20110757 20110833 -2311994 + (TGG)n Simple_repeat Simple_repeat 3 78 0 1 738 209 220 20 0 chrX 20113246 20113296 -2309531 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 738 183 139 0 0 chrX 20113310 20113346 -2309481 + (CAAAT)n Simple_repeat Simple_repeat 3 38 0 1 738 21 0 0 0 chrX 20115814 20115835 -2306992 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 234 62 0 0 chrX 20116305 20116337 -2306490 + (CGAAT)n Simple_repeat Simple_repeat 2 33 0 1 738 198 128 0 0 chrX 20117571 20117610 -2305217 + (GGA)n Simple_repeat Simple_repeat 3 41 0 1 738 22 56 0 0 chrX 20119385 20119421 -2303406 + AT_rich Low_complexity Low_complexity 1 36 0 1 738 221 151 0 19 chrX 20122616 20122670 -2300157 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 738 228 163 0 0 chrX 20124415 20124458 -2298369 + (GATTG)n Simple_repeat Simple_repeat 4 46 0 1 738 198 71 0 0 chrX 20124938 20124966 -2297861 + (CTCG)n Simple_repeat Simple_repeat 4 31 0 1 738 318 107 0 0 chrX 20125281 20125337 -2297490 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 738 197 65 0 31 chrX 20128156 20128188 -2294639 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 1 738 23 0 0 0 chrX 20128956 20128979 -2293848 + AT_rich Low_complexity Low_complexity 1 23 0 1 738 21 0 0 0 chrX 20129617 20129638 -2293189 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 1485 132 124 30 chrX 20129684 20130113 -2292714 - DNAREP1_DM LINE Penelope 0 594 1 1 738 209 100 75 0 chrX 20131454 20131494 -2291333 + (TTCTG)n Simple_repeat Simple_repeat 3 45 0 1 738 195 146 0 0 chrX 20131718 20131759 -2291068 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 738 251 50 50 0 chrX 20132925 20132965 -2289862 + (TCCG)n Simple_repeat Simple_repeat 4 45 0 1 738 21 0 0 0 chrX 20136523 20136544 -2286283 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 281 68 23 0 chrX 20137216 20137260 -2285567 + (TTAAA)n Simple_repeat Simple_repeat 3 47 0 1 738 596 139 0 0 chrX 20137282 20137383 -2285444 - BS LINE Jockey -3 5123 5023 1 738 203 229 0 16 chrX 20138719 20138781 -2284046 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1 738 324 133 0 0 chrX 20141536 20141596 -2281231 + (CAT)n Simple_repeat Simple_repeat 3 62 0 1 738 21 0 0 0 chrX 20143044 20143065 -2279762 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 213 143 0 23 chrX 20143184 20143227 -2279600 + (TGGA)n Simple_repeat Simple_repeat 2 43 0 1 738 243 230 0 0 chrX 20144773 20144860 -2277967 + (CACCAT)n Simple_repeat Simple_repeat 4 90 0 1 738 185 0 0 39 chrX 20144984 20145010 -2277817 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 738 288 204 310 0 chrX 20147789 20147905 -2274922 + DNAREP1_DM LINE Penelope 434 585 -9 1 738 189 211 0 0 chrX 20148667 20148724 -2274103 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 738 279 122 0 0 chrX 20149995 20150044 -2272783 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 738 45 34 0 0 chrX 20151067 20151126 -2271701 + AT_rich Low_complexity Low_complexity 1 59 0 1 738 25 0 0 0 chrX 20151224 20151249 -2271578 + AT_rich Low_complexity Low_complexity 1 25 0 1 738 270 56 0 0 chrX 20152859 20152895 -2269932 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 738 180 0 0 0 chrX 20154524 20154544 -2268283 + (T)n Simple_repeat Simple_repeat 1 20 0 1 738 231 36 0 0 chrX 20155792 20155820 -2267007 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 738 225 94 0 0 chrX 20155890 20155922 -2266905 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 738 255 140 0 0 chrX 20157421 20157471 -2265356 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 738 288 137 0 0 chrX 20159660 20159711 -2263116 + (ATG)n Simple_repeat Simple_repeat 1 51 0 1 738 249 151 0 0 chrX 20160013 20160066 -2262761 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 738 21 0 0 0 chrX 20161994 20162015 -2260812 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 251 226 23 23 chrX 20162403 20162489 -2260338 + T-rich Low_complexity Low_complexity 2 87 0 1 738 261 0 0 0 chrX 20163102 20163131 -2259696 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1 738 222 118 0 0 chrX 20163739 20163773 -2259054 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 738 207 100 0 0 chrX 20164284 20164314 -2258513 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1 738 396 111 0 0 chrX 20164461 20164524 -2258303 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 738 255 274 11 0 chrX 20164602 20164697 -2258130 + (CATATA)n Simple_repeat Simple_repeat 5 100 0 1 738 321 26 0 0 chrX 20165408 20165446 -2257381 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1 738 250 154 0 0 chrX 20166329 20166368 -2256459 - TRANSIB2 DNA Transib -275 2569 2531 1 738 26 0 0 0 chrX 20167753 20167779 -2255048 + AT_rich Low_complexity Low_complexity 1 26 0 1 738 333 140 0 0 chrX 20169318 20169375 -2253452 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 1 738 218 81 27 0 chrX 20170196 20170233 -2252594 + (CAGGA)n Simple_repeat Simple_repeat 1 38 0 1 738 21 0 0 0 chrX 20171901 20171922 -2250905 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 251 226 23 23 chrX 20172310 20172396 -2250431 + T-rich Low_complexity Low_complexity 2 87 0 1 738 261 0 0 0 chrX 20173009 20173038 -2249789 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1 738 222 118 0 0 chrX 20173646 20173680 -2249147 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 738 207 100 0 0 chrX 20174191 20174221 -2248606 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1 738 396 111 0 0 chrX 20174368 20174431 -2248396 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 738 255 274 11 0 chrX 20174509 20174604 -2248223 + (CATATA)n Simple_repeat Simple_repeat 5 100 0 1 738 321 26 0 0 chrX 20175315 20175353 -2247474 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1 738 252 154 0 0 chrX 20176236 20176275 -2246552 - TRANSIB2 DNA Transib -275 2569 2531 1 738 26 0 0 0 chrX 20177660 20177686 -2245141 + AT_rich Low_complexity Low_complexity 1 26 0 1 738 333 140 0 0 chrX 20179225 20179282 -2243545 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 1 738 218 81 27 0 chrX 20180103 20180140 -2242687 + (CAGGA)n Simple_repeat Simple_repeat 1 38 0 1 738 213 65 0 0 chrX 20184517 20184548 -2238279 + (CAGTT)n Simple_repeat Simple_repeat 5 35 0 1 739 222 37 0 0 chrX 20187214 20187241 -2235586 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 739 22 80 0 0 chrX 20187555 20187605 -2235222 + AT_rich Low_complexity Low_complexity 1 50 0 1 739 321 47 0 0 chrX 20188369 20188412 -2234415 + (CAG)n Simple_repeat Simple_repeat 3 45 0 1 739 333 0 0 0 chrX 20189814 20189851 -2232976 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 739 27 29 0 0 chrX 20190768 20190802 -2232025 + AT_rich Low_complexity Low_complexity 1 34 0 1 739 240 122 0 0 chrX 20194228 20194269 -2228558 + (CACTC)n Simple_repeat Simple_repeat 5 45 0 1 739 198 143 0 0 chrX 20194375 20194410 -2228417 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 1 739 201 121 0 0 chrX 20196105 20196138 -2226689 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 739 225 197 0 0 chrX 20196831 20196892 -2225935 + (TGGA)n Simple_repeat Simple_repeat 2 62 0 1 739 180 0 0 0 chrX 20198293 20198313 -2224514 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 739 249 83 0 0 chrX 20200257 20200293 -2222534 + (ATGGTG)n Simple_repeat Simple_repeat 3 38 0 1 739 205 135 0 37 chrX 20200984 20201038 -2221789 + (GTTTG)n Simple_repeat Simple_repeat 5 56 0 1 739 294 282 0 0 chrX 20206671 20206756 -2216071 + (ACTG)n Simple_repeat Simple_repeat 4 88 0 1 739 201 121 0 0 chrX 20207467 20207500 -2215327 + (CAGT)n Simple_repeat Simple_repeat 3 35 0 1 739 309 100 0 0 chrX 20209339 20209389 -2213438 + (GGA)n Simple_repeat Simple_repeat 3 52 0 1 739 222 304 0 0 chrX 20210382 20210451 -2212376 + (CCCCAA)n Simple_repeat Simple_repeat 2 70 0 1 739 189 147 0 0 chrX 20211028 20211062 -2211765 + (CTG)n Simple_repeat Simple_repeat 2 35 0 1 739 419 151 18 28 chrX 20211198 20211307 -2211520 + (CAGCT)n Simple_repeat Simple_repeat 1 108 0 1 739 203 359 0 0 chrX 20211420 20211498 -2211329 + (CAGAGA)n Simple_repeat Simple_repeat 4 81 0 1 739 222 160 0 0 chrX 20212693 20212743 -2210084 + (ACTG)n Simple_repeat Simple_repeat 3 52 0 1 739 226 375 10 0 chrX 20213051 20213147 -2209680 + (CAG)n Simple_repeat Simple_repeat 3 99 0 1 739 207 69 0 0 chrX 20214044 20214073 -2208754 + (CCGAA)n Simple_repeat Simple_repeat 3 31 0 1 739 421 75 0 0 chrX 20215134 20215187 -2207640 + DNAREP1_DM LINE Penelope 1 53 -541 1 739 1561 80 47 5 chrX 20215185 20215400 -2207427 + DNAREP1_DM LINE Penelope 270 493 -101 1 739 35 24 0 0 chrX 20215478 20215520 -2207307 + AT_rich Low_complexity Low_complexity 1 42 0 1 739 225 65 0 0 chrX 20216276 20216307 -2206520 + (CTCA)n Simple_repeat Simple_repeat 4 34 0 1 739 276 30 0 0 chrX 20219814 20219847 -2202980 + (CACTC)n Simple_repeat Simple_repeat 5 37 0 1 739 214 204 20 0 chrX 20219938 20219987 -2202840 + (CGA)n Simple_repeat Simple_repeat 2 51 0 1 739 21 36 0 0 chrX 20220421 20220449 -2202378 + AT_rich Low_complexity Low_complexity 1 28 0 1 739 1264 75 80 11 chrX 20220554 20220742 -2202085 + DNAREP1_DM LINE Penelope 1 201 -393 1 739 719 174 0 13 chrX 20220819 20220970 -2201857 + I_DM LINE I 2358 2506 -3725 1 739 379 44 0 0 chrX 20221198 20221243 -2201584 - DNAREP1_DM LINE Penelope -549 45 1 1 739 216 211 0 17 chrX 20221967 20222025 -2200802 + GA-rich Low_complexity Low_complexity 2 58 0 1 739 225 243 0 0 chrX 20222985 20223055 -2199772 + (TCCG)n Simple_repeat Simple_repeat 4 73 0 1 739 360 176 0 0 chrX 20223558 20223660 -2199167 + GA-rich Low_complexity Low_complexity 1 102 0 1 739 35 24 0 0 chrX 20223943 20223985 -2198842 + AT_rich Low_complexity Low_complexity 1 42 0 1 739 237 300 0 0 chrX 20224022 20224092 -2198735 + (CAA)n Simple_repeat Simple_repeat 3 72 0 1 739 195 42 0 0 chrX 20225156 20225180 -2197647 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 739 40 37 0 0 chrX 20226112 20226166 -2196661 + AT_rich Low_complexity Low_complexity 1 54 0 1 739 225 132 0 0 chrX 20226389 20226427 -2196400 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 739 423 119 0 0 chrX 20228552 20228619 -2194208 + (CAG)n Simple_repeat Simple_repeat 1 67 0 1 739 275 121 17 0 chrX 20228674 20228732 -2194095 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 739 437 175 0 0 chrX 20230514 20230594 -2192233 - DNAREP1_DM LINE Penelope -151 443 364 1 739 23 78 0 0 chrX 20231222 20231273 -2191554 + AT_rich Low_complexity Low_complexity 1 51 0 1 739 222 37 0 0 chrX 20232746 20232773 -2190054 + (T)n Simple_repeat Simple_repeat 1 27 0 1 739 180 0 0 0 chrX 20234417 20234437 -2188390 + (T)n Simple_repeat Simple_repeat 1 20 0 1 739 240 35 0 0 chrX 20234674 20234703 -2188124 + (TTCTG)n Simple_repeat Simple_repeat 2 30 0 1 739 379 196 326 26 chrX 20235990 20236153 -2186674 - DNAREP1_DM LINE Penelope -25 569 358 1 739 27 0 0 0 chrX 20236275 20236302 -2186525 + AT_rich Low_complexity Low_complexity 1 27 0 1 739 300 175 0 17 chrX 20236358 20236416 -2186411 - DNAREP1_DM LINE Penelope -537 57 1 1 739 27 0 0 0 chrX 20236416 20236443 -2186384 + AT_rich Low_complexity Low_complexity 1 27 0 1 739 180 0 0 0 chrX 20236837 20236857 -2185970 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 739 269 338 0 0 chrX 20237844 20237986 -2184841 + (CATATA)n Simple_repeat Simple_repeat 2 143 0 1 739 735 209 45 57 chrX 20238963 20239207 -2183620 + FB4_DM DNA Tc1 1111 1351 -2738 1 739 230 184 20 0 chrX 20239208 20239257 -2183570 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 739 276 264 0 68 chrX 20243642 20243760 -2179067 + A-rich Low_complexity Low_complexity 5 114 0 1 739 193 52 83 33 chrX 20244611 20244671 -2178156 + (ATAAG)n Simple_repeat Simple_repeat 3 65 0 1 739 252 218 0 0 chrX 20244774 20244829 -2177998 + DNAREP1_DM LINE Penelope 7 61 -533 1 739 198 0 0 0 chrX 20246307 20246329 -2176498 + (CCTTG)n Simple_repeat Simple_repeat 5 26 0 1 739 8080 1 0 0 chrX 20248399 20249303 -2173524 + HOBO DNA hAT 1 904 -2112 1 739 4421 0 0 10 chrX 20249301 20249805 -2173022 + HOBO DNA hAT 2518 3016 0 1 739 242 191 95 0 chrX 20251463 20251526 -2171301 + (TCCG)n Simple_repeat Simple_repeat 3 71 0 1 739 252 0 0 0 chrX 20252088 20252116 -2170711 + (CACAA)n Simple_repeat Simple_repeat 2 29 0 1 739 862 75 0 8 chrX 20252459 20252580 -2170247 + DNAREP1_DM LINE Penelope 1 120 -474 1 739 718 96 31 88 chrX 20252592 20252752 -2170075 + DNAREP1_DM LINE Penelope 198 348 -246 1 739 479 49 0 0 chrX 20252780 20252841 -2169986 + DNAREP1_DM LINE Penelope 531 591 -3 1 739 887 122 192 28 chrX 20252840 20253017 -2169810 + BEL_I LTR Pao 681 886 -4518 1 739 3028 124 142 18 chrX 20253034 20253997 -2168830 + BEL_I LTR Pao 1337 2419 -2985 1 739 1232 181 25 4 chrX 20253996 20254240 -2168587 + BEL_I LTR Pao 2644 2892 -2512 1 739 24 53 0 0 chrX 20255183 20255221 -2167606 + AT_rich Low_complexity Low_complexity 1 38 0 1 739 234 0 0 0 chrX 20255608 20255634 -2167193 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 739 433 32 0 0 chrX 20256680 20256742 -2166085 + G4_DM LINE Jockey 3795 3856 0 1 739 225 0 0 0 chrX 20256953 20256978 -2165849 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 739 450 36 0 0 chrX 20258117 20258173 -2164654 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 739 198 71 0 0 chrX 20258379 20258407 -2164420 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 739 226 266 16 0 chrX 20258500 20258564 -2164263 + T-rich Low_complexity Low_complexity 5 69 0 1 739 209 222 0 0 chrX 20260529 20260574 -2162253 + (CTTTA)n Simple_repeat Simple_repeat 1 45 0 1 739 226 254 14 14 chrX 20260906 20260978 -2161849 + (CATATA)n Simple_repeat Simple_repeat 2 73 0 1 739 233 125 17 35 chrX 20261933 20261991 -2160836 + (TTATA)n Simple_repeat Simple_repeat 4 60 0 1 739 180 118 42 42 chrX 20262053 20262124 -2160703 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 739 186 71 0 0 chrX 20263295 20263323 -2159504 + (GACTG)n Simple_repeat Simple_repeat 4 31 0 1 739 21 0 0 0 chrX 20263369 20263390 -2159437 + AT_rich Low_complexity Low_complexity 1 21 0 1 739 21 57 0 0 chrX 20264861 20264896 -2157931 + AT_rich Low_complexity Low_complexity 1 35 0 1 739 225 235 0 0 chrX 20265743 20265794 -2157033 + C-rich Low_complexity Low_complexity 2 52 0 1 739 200 211 0 0 chrX 20266718 20266756 -2156071 + (CCA)n Simple_repeat Simple_repeat 1 38 0 1 739 1601 79 0 0 chrX 20267963 20268177 -2154650 - DMRT1B LINE R1 -3 5180 4967 1 739 1321 130 103 17 chrX 20268176 20268410 -2154417 - DMRT1B LINE R1 -989 4194 3941 1 739 1264 98 27 0 chrX 20268410 20268594 -2154233 - DMRT1B LINE R1 -1784 3399 3211 1 739 997 155 183 0 chrX 20268591 20268804 -2154023 - DMRT1B LINE R1 -2080 3103 2852 1 739 240 104 0 0 chrX 20268827 20268875 -2153952 - DMRT1B LINE R1 -2619 2564 2517 1 739 1000 145 166 0 chrX 20268875 20269068 -2153759 - DMRT1B LINE R1 -3186 1997 1773 1 739 338 179 11 0 chrX 20282830 20282925 -2139902 + GA-rich Low_complexity Low_complexity 1 96 0 1 739 31 26 0 0 chrX 20282976 20283014 -2139813 + AT_rich Low_complexity Low_complexity 1 38 0 1 739 192 135 0 0 chrX 20283063 20283100 -2139727 + (CAATC)n Simple_repeat Simple_repeat 1 37 0 1 739 288 137 78 0 chrX 20285554 20285605 -2137222 - DNAREP1_DM LINE Penelope -118 476 422 1 739 21 36 0 0 chrX 20285758 20285786 -2137041 + AT_rich Low_complexity Low_complexity 1 28 0 1 739 22 0 0 0 chrX 20286026 20286048 -2136779 + AT_rich Low_complexity Low_complexity 1 22 0 1 739 25 51 0 0 chrX 20286248 20286287 -2136540 + AT_rich Low_complexity Low_complexity 1 39 0 1 739 21 0 0 0 chrX 20289027 20289048 -2133779 + AT_rich Low_complexity Low_complexity 1 21 0 1 739 22 35 0 0 chrX 20297544 20297573 -2125254 + AT_rich Low_complexity Low_complexity 1 29 0 1 739 23 33 0 0 chrX 20298489 20298519 -2124308 + AT_rich Low_complexity Low_complexity 1 30 0 1 739 35 41 0 0 chrX 20307329 20307378 -2115449 + AT_rich Low_complexity Low_complexity 1 49 0 1 739 22 0 0 0 chrX 20308770 20308792 -2114035 + AT_rich Low_complexity Low_complexity 1 22 0 1 739 203 61 0 29 chrX 20314715 20314749 -2108078 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1 739 195 42 0 0 chrX 20315615 20315639 -2107188 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 739 318 67 0 0 chrX 20316092 20316137 -2106690 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 740 258 32 0 0 chrX 20316366 20316397 -2106430 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 740 438 122 49 0 chrX 20316831 20316913 -2105914 - DNAREP1_DM LINE Penelope -17 577 492 1 740 1634 97 3 21 chrX 20316930 20317214 -2105613 - DNAREP1_DM LINE Penelope -315 279 1 1 740 515 149 484 17 chrX 20317853 20318143 -2104684 - DNAREP1_DM LINE Penelope -9 585 161 1 740 262 257 0 39 chrX 20318344 20318421 -2104406 + DNAREP1_DM LINE Penelope 1 74 -520 1 740 33 25 0 0 chrX 20319629 20319669 -2103158 + AT_rich Low_complexity Low_complexity 1 40 0 1 740 215 236 0 0 chrX 20320775 20320830 -2101997 + A-rich Low_complexity Low_complexity 3 57 0 1 740 186 71 0 0 chrX 20321013 20321041 -2101786 + (A)n Simple_repeat Simple_repeat 1 28 0 1 740 180 0 0 0 chrX 20322023 20322043 -2100784 + (GAATG)n Simple_repeat Simple_repeat 1 20 0 1 740 432 182 111 0 chrX 20324779 20324878 -2097949 - DNAREP1_DM LINE Penelope -483 111 2 1 740 28 0 0 0 chrX 20325028 20325056 -2097771 + AT_rich Low_complexity Low_complexity 1 28 0 1 740 195 129 0 0 chrX 20327550 20327581 -2095246 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1 740 273 98 0 0 chrX 20327937 20327978 -2094849 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 740 180 111 0 0 chrX 20328166 20328193 -2094634 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 740 1373 117 104 39 chrX 20331669 20332126 -2090701 + DNAREP1_DM LINE Penelope 1 594 0 1 740 188 34 0 33 chrX 20332951 20332981 -2089846 + (TATAA)n Simple_repeat Simple_repeat 5 33 0 1 740 210 71 0 0 chrX 20333971 20333999 -2088828 + (CAG)n Simple_repeat Simple_repeat 1 28 0 1 740 234 0 0 0 chrX 20334648 20334674 -2088153 + (CAG)n Simple_repeat Simple_repeat 2 27 0 1 740 586 116 23 0 chrX 20335382 20335468 -2087359 + DNAREP1_DM LINE Penelope 1 88 -506 1 740 409 105 0 0 chrX 20335545 20335602 -2087225 + DNAREP1_DM LINE Penelope 538 594 0 1 740 203 194 0 0 chrX 20337579 20337615 -2085212 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 740 23 33 0 0 chrX 20337698 20337728 -2085099 + AT_rich Low_complexity Low_complexity 1 30 0 1 740 208 286 0 0 chrX 20337917 20337966 -2084861 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 740 195 100 0 0 chrX 20337981 20338011 -2084816 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 740 22 0 0 0 chrX 20338381 20338403 -2084424 + AT_rich Low_complexity Low_complexity 1 22 0 1 740 32 67 0 0 chrX 20338843 20338903 -2083924 + AT_rich Low_complexity Low_complexity 1 60 0 1 740 21 36 0 0 chrX 20341112 20341140 -2081687 + AT_rich Low_complexity Low_complexity 1 28 0 1 740 24 53 0 0 chrX 20341321 20341359 -2081468 + AT_rich Low_complexity Low_complexity 1 38 0 1 740 23 33 0 0 chrX 20341532 20341562 -2081265 + AT_rich Low_complexity Low_complexity 1 30 0 1 740 255 133 0 0 chrX 20343137 20343182 -2079645 + (CTG)n Simple_repeat Simple_repeat 3 47 0 1 740 303 194 0 0 chrX 20345139 20345232 -2077595 + (TGG)n Simple_repeat Simple_repeat 1 93 0 1 740 246 189 0 0 chrX 20348755 20348829 -2073998 - ROO_I LTR Pao -7527 729 656 1 740 258 81 0 0 chrX 20348908 20348945 -2073882 + (CTG)n Simple_repeat Simple_repeat 2 38 0 1 740 281 235 0 29 chrX 20351960 20352030 -2070797 + DNAREP1_DM LINE Penelope 4 71 -523 1 740 371 219 344 7 chrX 20352200 20352331 -2070496 + DNAREP1_DM LINE Penelope 403 577 -17 1 740 225 94 0 0 chrX 20352379 20352411 -2070416 + (ATTCG)n Simple_repeat Simple_repeat 4 35 0 1 740 315 49 0 0 chrX 20352785 20352826 -2070001 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 740 26 0 0 0 chrX 20353688 20353714 -2069113 + AT_rich Low_complexity Low_complexity 1 26 0 1 740 23 33 0 0 chrX 20353999 20354029 -2068798 + AT_rich Low_complexity Low_complexity 1 30 0 1 740 210 118 0 0 chrX 20354667 20354701 -2068126 + (CAAT)n Simple_repeat Simple_repeat 3 36 0 1 740 192 77 0 0 chrX 20354952 20354978 -2067849 + (G)n Simple_repeat Simple_repeat 1 26 0 1 740 21 36 0 0 chrX 20355367 20355395 -2067432 + AT_rich Low_complexity Low_complexity 1 28 0 1 740 21 0 0 0 chrX 20356146 20356167 -2066660 + AT_rich Low_complexity Low_complexity 1 21 0 1 740 238 170 0 0 chrX 20358043 20358096 -2064731 - ROO_I LTR Pao -7542 714 662 1 740 252 86 0 0 chrX 20358163 20358198 -2064629 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1 740 215 148 0 36 chrX 20358393 20358449 -2064378 + (CTG)n Simple_repeat Simple_repeat 1 54 0 1 740 192 77 0 0 chrX 20359629 20359655 -2063172 + (CTG)n Simple_repeat Simple_repeat 3 28 0 1 740 28 48 0 0 chrX 20360376 20360418 -2062409 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 35 0 0 0 chrX 20360567 20360602 -2062225 + AT_rich Low_complexity Low_complexity 1 35 0 1 740 192 214 0 0 chrX 20361778 20361834 -2060993 + (CTG)n Simple_repeat Simple_repeat 3 58 0 1 740 21 0 0 0 chrX 20362425 20362446 -2060381 + AT_rich Low_complexity Low_complexity 1 21 0 1 740 21 36 0 0 chrX 20364789 20364817 -2058010 + AT_rich Low_complexity Low_complexity 1 28 0 1 740 258 165 33 76 chrX 20366546 20366638 -2056189 + Stalker2_LTR LTR Gypsy 227 314 -110 1 740 206 121 0 0 chrX 20367820 20367853 -2054974 + (A)n Simple_repeat Simple_repeat 1 33 0 1 740 26 0 0 0 chrX 20368694 20368720 -2054107 + AT_rich Low_complexity Low_complexity 1 26 0 1 740 423 0 0 0 chrX 20368730 20368777 -2054050 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 740 22 0 0 0 chrX 20370743 20370765 -2052062 + AT_rich Low_complexity Low_complexity 1 22 0 1 740 21 36 0 0 chrX 20371468 20371496 -2051331 + AT_rich Low_complexity Low_complexity 1 28 0 1 740 30 27 0 0 chrX 20371955 20371992 -2050835 + AT_rich Low_complexity Low_complexity 1 37 0 1 740 233 195 0 0 chrX 20372008 20372049 -2050778 + GA-rich Low_complexity Low_complexity 3 43 0 1 740 198 150 0 0 chrX 20372061 20372101 -2050726 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 740 225 132 0 0 chrX 20372403 20372441 -2050386 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 740 7115 34 0 1 chrX 20375206 20376060 -2046767 + TRANSIB2 DNA Transib 1 853 -1991 1 740 5294 21 2 0 chrX 20376060 20376669 -2046158 + TRANSIB2 DNA Transib 2235 2844 0 1 740 180 0 0 0 chrX 20377225 20377245 -2045582 + (T)n Simple_repeat Simple_repeat 1 20 0 1 740 231 218 0 0 chrX 20378539 20378594 -2044233 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 1 740 27 0 0 0 chrX 20379037 20379064 -2043763 + AT_rich Low_complexity Low_complexity 1 27 0 1 740 212 213 21 0 chrX 20380570 20380617 -2042210 + T-rich Low_complexity Low_complexity 1 48 0 1 740 241 192 19 0 chrX 20380968 20381020 -2041807 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 740 37 23 0 0 chrX 20382035 20382079 -2040748 + AT_rich Low_complexity Low_complexity 1 44 0 1 740 23 68 0 0 chrX 20382183 20382227 -2040600 + AT_rich Low_complexity Low_complexity 1 44 0 1 740 453 322 29 29 chrX 20396920 20397195 -2025632 - BLASTOPIA_I LTR Gypsy -2318 2163 1889 1 740 2986 94 159 29 chrX 20397957 20398473 -2024354 - DNAREP1_DM LINE Penelope 0 594 12 1 740 703 133 0 0 chrX 20399164 20399269 -2023558 - DNAREP1_DM LINE Penelope -463 131 27 1 740 23 0 0 0 chrX 20402607 20402630 -2020197 + AT_rich Low_complexity Low_complexity 1 23 0 1 740 198 103 0 0 chrX 20403016 20403045 -2019782 + (CTA)n Simple_repeat Simple_repeat 1 29 0 1 740 26 0 0 0 chrX 20405315 20405341 -2017486 + AT_rich Low_complexity Low_complexity 1 26 0 1 740 34 55 0 0 chrX 20406141 20406196 -2016631 + AT_rich Low_complexity Low_complexity 1 55 0 1 740 26 30 0 0 chrX 20407009 20407042 -2015785 + AT_rich Low_complexity Low_complexity 1 33 0 1 740 267 146 0 0 chrX 20407294 20407349 -2015478 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 740 203 79 26 0 chrX 20407683 20407721 -2015106 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 740 28 48 0 0 chrX 20410490 20410532 -2012295 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 321 100 0 0 chrX 20411124 20411174 -2011653 + (ATTCG)n Simple_repeat Simple_repeat 1 50 0 1 740 28 61 0 0 chrX 20411537 20411586 -2011241 + AT_rich Low_complexity Low_complexity 1 49 0 1 740 346 159 91 0 chrX 20411952 20412040 -2010787 + ROO_I LTR Pao 641 736 -7520 1 740 265 276 0 24 chrX 20412058 20412184 -2010643 + ROO_I LTR Pao 634 756 -7500 1 740 211 255 0 0 chrX 20412570 20412617 -2010210 + (TCCG)n Simple_repeat Simple_repeat 2 48 0 1 740 225 163 0 0 chrX 20413748 20413797 -2009030 + T-rich Low_complexity Low_complexity 1 49 0 1 740 21 0 0 0 chrX 20417971 20417992 -2004835 + AT_rich Low_complexity Low_complexity 1 21 0 1 740 285 272 0 0 chrX 20418243 20418324 -2004503 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 740 195 100 0 0 chrX 20418718 20418748 -2004079 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 740 243 0 0 0 chrX 20421308 20421335 -2001492 + (AGTTG)n Simple_repeat Simple_repeat 4 30 0 1 740 204 40 0 0 chrX 20421767 20421792 -2001035 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 740 342 0 0 0 chrX 20422064 20422102 -2000725 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 740 198 174 0 0 chrX 20422615 20422661 -2000166 + A-rich Low_complexity Low_complexity 1 46 0 1 740 29 0 0 0 chrX 20425031 20425060 -1997767 + AT_rich Low_complexity Low_complexity 1 29 0 1 740 21 57 0 0 chrX 20425813 20425848 -1996979 + AT_rich Low_complexity Low_complexity 1 35 0 1 740 297 0 0 0 chrX 20426968 20427001 -1995826 + (CCCCG)n Simple_repeat Simple_repeat 5 37 0 1 740 213 154 0 0 chrX 20427814 20427853 -1994974 + A-rich Low_complexity Low_complexity 1 39 0 1 740 189 0 0 0 chrX 20428913 20428934 -1993893 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 740 192 235 0 0 chrX 20430972 20431040 -1991787 + T-rich Low_complexity Low_complexity 1 68 0 1 740 32 0 0 0 chrX 20431538 20431570 -1991257 + AT_rich Low_complexity Low_complexity 1 32 0 1 740 189 0 0 0 chrX 20432284 20432305 -1990522 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 740 273 185 0 0 chrX 20432645 20432710 -1990117 + CT-rich Low_complexity Low_complexity 2 66 0 1 740 308 286 0 0 chrX 20432860 20432937 -1989890 + (CCG)n Simple_repeat Simple_repeat 2 78 0 1 740 204 40 0 0 chrX 20433976 20434001 -1988826 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 740 22 56 0 0 chrX 20435724 20435760 -1987067 + AT_rich Low_complexity Low_complexity 1 36 0 1 740 25 0 0 0 chrX 20435976 20436001 -1986826 + AT_rich Low_complexity Low_complexity 1 25 0 1 740 231 61 0 0 chrX 20436026 20436059 -1986768 + (CAG)n Simple_repeat Simple_repeat 1 33 0 1 740 225 154 0 0 chrX 20436201 20436240 -1986587 + (CAA)n Simple_repeat Simple_repeat 3 41 0 1 740 36 23 0 0 chrX 20438079 20438122 -1984705 + AT_rich Low_complexity Low_complexity 1 43 0 1 740 404 171 43 54 chrX 20439306 20439399 -1983428 - DNAREP1_DM LINE Penelope -140 454 363 1 740 195 42 0 0 chrX 20443357 20443381 -1979446 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 740 208 121 0 0 chrX 20443507 20443540 -1979287 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 740 26 0 0 0 chrX 20443827 20443853 -1978974 + AT_rich Low_complexity Low_complexity 1 26 0 1 740 237 146 0 59 chrX 20443870 20443921 -1978906 + DNAREP1_DM LINE Penelope 451 498 -96 1 740 386 197 0 0 chrX 20445075 20445146 -1977681 - DNAREP1_DM LINE Penelope -10 584 514 1 740 180 97 0 0 chrX 20445952 20445983 -1976844 + (T)n Simple_repeat Simple_repeat 1 31 0 1 92 2851 107 172 12 chrX 20447041 20447553 -1975274 - DNAREP1_DM LINE Penelope 0 594 1 1 741 255 61 0 0 chrX 20448707 20448740 -1974087 + (CATTT)n Simple_repeat Simple_repeat 2 34 0 1 741 215 236 0 0 chrX 20449719 20449774 -1973053 + T-rich Low_complexity Low_complexity 1 55 0 1 741 185 65 32 0 chrX 20450129 20450160 -1972667 + (TTGTG)n Simple_repeat Simple_repeat 3 34 0 1 741 22 56 0 0 chrX 20450441 20450477 -1972350 + AT_rich Low_complexity Low_complexity 1 36 0 1 741 212 171 0 0 chrX 20452691 20452726 -1970101 + (AGTTG)n Simple_repeat Simple_repeat 1 35 0 1 741 23 33 0 0 chrX 20453651 20453681 -1969146 + AT_rich Low_complexity Low_complexity 1 30 0 1 741 25 0 0 0 chrX 20456523 20456548 -1966279 + AT_rich Low_complexity Low_complexity 1 25 0 1 741 22 88 0 0 chrX 20459761 20459818 -1963009 + AT_rich Low_complexity Low_complexity 1 57 0 1 741 21 95 0 0 chrX 20461198 20461261 -1961566 + AT_rich Low_complexity Low_complexity 1 63 0 1 741 270 56 0 0 chrX 20461505 20461541 -1961286 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 741 186 191 0 0 chrX 20463084 20463126 -1959701 + C-rich Low_complexity Low_complexity 5 46 0 1 741 203 276 0 38 chrX 20463960 20464039 -1958788 + C-rich Low_complexity Low_complexity 6 81 0 1 741 240 86 0 0 chrX 20464868 20464903 -1957924 + (TCC)n Simple_repeat Simple_repeat 1 35 0 1 741 216 0 0 0 chrX 20466830 20466854 -1955973 + (T)n Simple_repeat Simple_repeat 1 24 0 1 741 21 0 0 0 chrX 20467143 20467164 -1955663 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 213 39 0 0 chrX 20469092 20469118 -1953709 + (AAGTG)n Simple_repeat Simple_repeat 2 27 0 1 741 206 162 27 0 chrX 20470624 20470661 -1952166 + (TATATG)n Simple_repeat Simple_repeat 3 40 0 1 741 237 139 0 0 chrX 20471439 20471482 -1951345 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 741 186 258 0 0 chrX 20472666 20472728 -1950099 + (ATG)n Simple_repeat Simple_repeat 2 63 0 1 741 201 133 0 0 chrX 20474683 20474713 -1948114 + (GGA)n Simple_repeat Simple_repeat 2 31 0 1 741 228 245 0 30 chrX 20475487 20475588 -1947239 - ROO_I LTR Pao -7518 738 641 1 741 606 113 0 0 chrX 20475699 20475796 -1947031 + (CTG)n Simple_repeat Simple_repeat 2 98 0 1 741 198 0 0 0 chrX 20477960 20477982 -1944845 + (A)n Simple_repeat Simple_repeat 1 22 0 1 741 198 103 0 0 chrX 20478762 20478791 -1944036 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 741 180 77 0 0 chrX 20479765 20479791 -1943036 + (CAATG)n Simple_repeat Simple_repeat 4 29 0 1 741 246 293 0 0 chrX 20481434 20481509 -1941318 + (TTG)n Simple_repeat Simple_repeat 1 75 0 1 741 218 143 0 20 chrX 20484246 20484296 -1938531 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 741 276 77 0 0 chrX 20485383 20485422 -1937405 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 741 291 204 0 0 chrX 20485862 20485916 -1936911 + DNAREP1_DM LINE Penelope 1 54 -540 1 741 24 0 0 0 chrX 20486070 20486094 -1936733 + AT_rich Low_complexity Low_complexity 1 24 0 1 741 267 54 0 0 chrX 20486380 20486417 -1936410 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1 741 29 47 0 0 chrX 20486462 20486505 -1936322 + AT_rich Low_complexity Low_complexity 1 43 0 1 741 204 298 12 0 chrX 20489265 20489349 -1933478 + (CAA)n Simple_repeat Simple_repeat 2 86 0 1 741 314 45 0 22 chrX 20490005 20490050 -1932777 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 741 26 30 0 0 chrX 20491834 20491867 -1930960 + AT_rich Low_complexity Low_complexity 1 33 0 1 741 219 212 0 29 chrX 20493694 20493762 -1929065 + T-rich Low_complexity Low_complexity 2 67 0 1 741 225 108 0 0 chrX 20494492 20494529 -1928298 + (CGAAT)n Simple_repeat Simple_repeat 1 37 0 1 741 306 73 0 0 chrX 20494813 20494854 -1927973 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 741 255 61 0 0 chrX 20495075 20495108 -1927719 + (CAG)n Simple_repeat Simple_repeat 3 35 0 1 741 240 86 0 0 chrX 20500478 20500513 -1922314 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 741 208 200 22 0 chrX 20500778 20500823 -1922004 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 741 216 0 0 0 chrX 20501267 20501291 -1921536 + (A)n Simple_repeat Simple_repeat 1 24 0 1 741 24 0 0 0 chrX 20501548 20501572 -1921255 + AT_rich Low_complexity Low_complexity 1 24 0 1 741 895 155 37 5 chrX 20503912 20504100 -1918727 + DNAREP1_DM LINE Penelope 1 194 -400 1 741 297 101 552 18 chrX 20504106 20504217 -1918610 + DNAREP1_DM LINE Penelope 424 594 0 1 741 22 0 0 0 chrX 20505856 20505878 -1916949 + AT_rich Low_complexity Low_complexity 1 22 0 1 741 34 65 0 0 chrX 20507400 20507462 -1915365 + AT_rich Low_complexity Low_complexity 1 62 0 1 741 24 32 0 0 chrX 20508104 20508135 -1914692 + AT_rich Low_complexity Low_complexity 1 31 0 1 741 25 0 0 0 chrX 20510036 20510061 -1912766 + AT_rich Low_complexity Low_complexity 1 25 0 1 741 24 0 0 0 chrX 20511005 20511029 -1911798 + AT_rich Low_complexity Low_complexity 1 24 0 1 741 32 0 0 0 chrX 20511093 20511125 -1911702 + AT_rich Low_complexity Low_complexity 1 32 0 1 741 25 0 0 0 chrX 20511171 20511196 -1911631 + AT_rich Low_complexity Low_complexity 1 25 0 1 741 22 35 0 0 chrX 20511801 20511830 -1910997 + AT_rich Low_complexity Low_complexity 1 29 0 1 741 30 27 0 0 chrX 20513890 20513927 -1908900 + AT_rich Low_complexity Low_complexity 1 37 0 1 741 21 0 0 0 chrX 20514297 20514318 -1908509 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 189 0 0 0 chrX 20514720 20514741 -1908086 + (CAT)n Simple_repeat Simple_repeat 2 22 0 1 741 24 53 0 0 chrX 20516460 20516498 -1906329 + AT_rich Low_complexity Low_complexity 1 38 0 1 741 227 235 0 29 chrX 20517537 20517607 -1905220 + (CCCA)n Simple_repeat Simple_repeat 3 70 0 1 741 21 0 0 0 chrX 20522846 20522867 -1899960 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 204 204 45 0 chrX 20525266 20525310 -1897517 + (CATA)n Simple_repeat Simple_repeat 2 47 0 1 741 276 154 0 0 chrX 20525963 20526015 -1896812 + (TTTG)n Simple_repeat Simple_repeat 3 54 0 1 741 25 0 0 0 chrX 20527898 20527923 -1894904 + AT_rich Low_complexity Low_complexity 1 25 0 1 741 186 43 0 0 chrX 20532825 20532848 -1889979 + (TTTCG)n Simple_repeat Simple_repeat 5 27 0 1 741 22 88 0 0 chrX 20533697 20533754 -1889073 + AT_rich Low_complexity Low_complexity 1 57 0 1 741 26 64 0 0 chrX 20533771 20533818 -1889009 + AT_rich Low_complexity Low_complexity 1 47 0 1 741 26 30 0 0 chrX 20534406 20534439 -1888388 + AT_rich Low_complexity Low_complexity 1 33 0 1 741 25 75 0 0 chrX 20536874 20536927 -1885900 + AT_rich Low_complexity Low_complexity 1 53 0 1 741 21 0 0 0 chrX 20536969 20536990 -1885837 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 24 67 0 0 chrX 20538005 20538050 -1884777 + AT_rich Low_complexity Low_complexity 1 45 0 1 741 1358 105 2 0 chrX 20544196 20544428 -1878399 - DNAREP1_DM LINE Penelope -234 360 1 1 741 1343 111 2 0 chrX 20544723 20544955 -1877872 - DNAREP1_DM LINE Penelope -234 360 1 1 741 1589 138 3 10 chrX 20545191 20545484 -1877343 - DNAREP1_DM LINE Penelope -183 411 121 1 741 228 143 0 0 chrX 20545490 20545532 -1877295 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 741 226 89 0 151 chrX 20545548 20545588 -1877239 + DNAREP1_DM LINE Penelope 68 102 -492 1 741 276 100 0 0 chrX 20545588 20545628 -1877199 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 741 226 89 0 151 chrX 20545628 20545640 -1877187 + DNAREP1_DM LINE Penelope 103 112 -482 1 741 710 88 0 0 chrX 20545646 20545748 -1877079 - DNAREP1_DM LINE Penelope -492 102 1 1 741 769 113 45 0 chrX 20546019 20546152 -1876675 - DNAREP1_DM LINE Penelope -455 139 1 1 741 1343 111 2 0 chrX 20546447 20546679 -1876148 - DNAREP1_DM LINE Penelope -234 360 1 1 741 1338 117 36 1 chrX 20546955 20547257 -1875570 - DNAREP1_DM LINE Penelope -149 445 1 1 741 1382 113 36 1 chrX 20547533 20547835 -1874992 - DNAREP1_DM LINE Penelope -149 445 1 1 741 25 65 0 0 chrX 20552023 20552069 -1870758 + AT_rich Low_complexity Low_complexity 1 46 0 1 741 21 0 0 0 chrX 20554011 20554032 -1868795 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 195 114 0 0 chrX 20555928 20555963 -1866864 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 741 270 180 0 0 chrX 20560520 20560581 -1862246 + A-rich Low_complexity Low_complexity 1 61 0 1 741 212 283 0 0 chrX 20560780 20560833 -1861994 + (CCG)n Simple_repeat Simple_repeat 3 55 0 1 741 21 0 0 0 chrX 20561185 20561206 -1861621 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 257 0 30 0 chrX 20564259 20564292 -1858535 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 741 23 0 0 0 chrX 20564292 20564315 -1858512 + AT_rich Low_complexity Low_complexity 1 23 0 1 741 192 40 0 0 chrX 20565158 20565183 -1857644 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 741 189 132 0 0 chrX 20565770 20565808 -1857019 + (CCG)n Simple_repeat Simple_repeat 3 40 0 1 741 208 174 21 21 chrX 20570740 20570787 -1852040 + (CGAAA)n Simple_repeat Simple_repeat 1 47 0 1 741 195 146 0 0 chrX 20571018 20571059 -1851768 + (T)n Simple_repeat Simple_repeat 1 41 0 1 741 35 0 0 0 chrX 20572189 20572224 -1850603 + AT_rich Low_complexity Low_complexity 1 35 0 1 741 369 93 0 0 chrX 20572695 20572749 -1850078 + (CAG)n Simple_repeat Simple_repeat 3 56 0 1 741 226 67 0 43 chrX 20573245 20573292 -1849535 + (TAA)n Simple_repeat Simple_repeat 2 46 0 1 741 284 127 18 0 chrX 20573577 20573632 -1849195 + (TCCG)n Simple_repeat Simple_repeat 1 56 0 1 741 303 175 0 0 chrX 20573876 20573933 -1848894 + (CCGAA)n Simple_repeat Simple_repeat 4 60 0 1 741 183 80 0 0 chrX 20574677 20574702 -1848125 + (GCTG)n Simple_repeat Simple_repeat 2 26 0 1 741 189 0 0 0 chrX 20574702 20574723 -1848104 + (GGAAA)n Simple_repeat Simple_repeat 3 23 0 1 741 25 31 0 0 chrX 20575166 20575198 -1847629 + AT_rich Low_complexity Low_complexity 1 32 0 1 741 25 0 0 0 chrX 20575370 20575395 -1847432 + AT_rich Low_complexity Low_complexity 1 25 0 1 741 180 0 0 0 chrX 20575557 20575577 -1847250 + (G)n Simple_repeat Simple_repeat 1 20 0 1 741 265 206 15 0 chrX 20576240 20576308 -1846519 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 741 267 31 0 0 chrX 20576358 20576390 -1846437 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 741 27 49 0 0 chrX 20576897 20576938 -1845889 + AT_rich Low_complexity Low_complexity 1 41 0 1 741 310 182 33 22 chrX 20578191 20578281 -1844546 + ROO_I LTR Pao 645 735 -7521 1 742 231 114 0 0 chrX 20579440 20579484 -1843343 + (CCAA)n Simple_repeat Simple_repeat 2 45 0 1 742 195 100 0 0 chrX 20581071 20581101 -1841726 + (GTTTG)n Simple_repeat Simple_repeat 2 31 0 1 742 38 39 0 0 chrX 20584996 20585048 -1837779 + AT_rich Low_complexity Low_complexity 1 52 0 1 742 21 0 0 0 chrX 20585672 20585693 -1837134 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 31 0 0 0 chrX 20585739 20585770 -1837057 + AT_rich Low_complexity Low_complexity 1 31 0 1 742 423 167 0 0 chrX 20586222 20586306 -1836521 - ROO_I LTR Pao -7511 745 662 1 742 24 67 0 0 chrX 20590518 20590563 -1832264 + AT_rich Low_complexity Low_complexity 1 45 0 1 742 221 262 0 0 chrX 20591311 20591372 -1831455 + T-rich Low_complexity Low_complexity 1 61 0 1 742 198 0 0 0 chrX 20600897 20600919 -1821908 + (A)n Simple_repeat Simple_repeat 1 22 0 1 742 225 222 12 36 chrX 20602811 20602895 -1819932 + (CCCA)n Simple_repeat Simple_repeat 1 82 0 1 742 21 0 0 0 chrX 20603049 20603070 -1819757 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 21 0 0 0 chrX 20604005 20604026 -1818801 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 24 0 0 0 chrX 20605454 20605478 -1817349 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 21 0 0 0 chrX 20610269 20610290 -1812537 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 228 35 0 0 chrX 20613327 20613356 -1809471 + (CATCG)n Simple_repeat Simple_repeat 4 32 0 1 742 24 32 0 0 chrX 20613641 20613672 -1809155 + AT_rich Low_complexity Low_complexity 1 31 0 1 742 32 0 0 0 chrX 20619675 20619707 -1803120 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 25 0 0 0 chrX 20620971 20620996 -1801831 + AT_rich Low_complexity Low_complexity 1 25 0 1 742 201 154 0 0 chrX 20626068 20626107 -1796720 + A-rich Low_complexity Low_complexity 1 39 0 1 742 189 0 0 0 chrX 20627272 20627293 -1795534 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1 742 21 0 0 0 chrX 20627682 20627703 -1795124 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 23 0 0 0 chrX 20628987 20629010 -1793817 + AT_rich Low_complexity Low_complexity 1 23 0 1 742 36 0 0 0 chrX 20630649 20630685 -1792142 + AT_rich Low_complexity Low_complexity 1 36 0 1 742 32 43 0 0 chrX 20630755 20630801 -1792026 + AT_rich Low_complexity Low_complexity 1 46 0 1 742 296 227 36 18 chrX 20635258 20635370 -1787457 + T-rich Low_complexity Low_complexity 3 116 0 1 742 51 0 0 0 chrX 20635370 20635421 -1787406 + AT_rich Low_complexity Low_complexity 1 51 0 1 742 244 266 26 44 chrX 20635539 20635653 -1787174 + T-rich Low_complexity Low_complexity 2 113 0 1 742 255 270 22 0 chrX 20635734 20635823 -1787004 + (TG)n Simple_repeat Simple_repeat 2 92 0 1 742 21 36 0 0 chrX 20635962 20635990 -1786837 + AT_rich Low_complexity Low_complexity 1 28 0 1 742 218 161 17 67 chrX 20636178 20636238 -1786589 + (TATG)n Simple_repeat Simple_repeat 1 57 0 1 742 246 136 0 0 chrX 20636624 20636668 -1786159 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 742 207 291 8 38 chrX 20637545 20637677 -1785150 + T-rich Low_complexity Low_complexity 5 132 0 1 742 204 245 0 0 chrX 20638136 20638185 -1784642 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 742 228 111 0 0 chrX 20639673 20639709 -1783118 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 1 742 288 53 0 0 chrX 20640014 20640052 -1782775 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 742 24 0 0 0 chrX 20641871 20641895 -1780932 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 265 24 48 0 chrX 20641913 20641955 -1780872 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 742 415 48 32 0 chrX 20642390 20642452 -1780375 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 742 249 57 0 0 chrX 20642525 20642560 -1780267 + (TTTAA)n Simple_repeat Simple_repeat 4 38 0 1 742 22 35 0 0 chrX 20645571 20645600 -1777227 + AT_rich Low_complexity Low_complexity 1 29 0 1 742 198 71 0 0 chrX 20647562 20647590 -1775237 + (CATTC)n Simple_repeat Simple_repeat 2 29 0 1 742 180 77 0 0 chrX 20647951 20647977 -1774850 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 742 26 50 0 0 chrX 20648653 20648693 -1774134 + AT_rich Low_complexity Low_complexity 1 40 0 1 742 1919 124 67 39 chrX 20652567 20652953 -1769874 + PROTOP_B DNA P 101 497 -656 1 742 476 68 111 22 chrX 20652962 20653052 -1769775 + PROTOP_B DNA P 878 975 -178 1 742 257 27 54 0 chrX 20653368 20653405 -1769422 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 1 742 3238 108 67 2 chrX 20653785 20654339 -1768488 + DNAREP1_DM LINE Penelope 5 594 0 1 742 310 188 0 34 chrX 20654374 20654462 -1768365 - Transib-N1_DM DNA Transib -409 105 21 1 742 25 0 0 0 chrX 20658038 20658063 -1764764 + AT_rich Low_complexity Low_complexity 1 25 0 1 742 192 40 0 0 chrX 20658063 20658088 -1764739 + (CTTTA)n Simple_repeat Simple_repeat 5 29 0 1 742 27 29 0 0 chrX 20658391 20658425 -1764402 + AT_rich Low_complexity Low_complexity 1 34 0 1 742 221 284 0 0 chrX 20659228 20659302 -1763525 + GA-rich Low_complexity Low_complexity 2 75 0 1 742 205 227 25 51 chrX 20666129 20666208 -1756619 + T-rich Low_complexity Low_complexity 5 81 0 1 742 207 263 30 10 chrX 20666860 20666960 -1755867 + (TTAAA)n Simple_repeat Simple_repeat 5 106 0 1 742 351 173 0 0 chrX 20670563 20670644 -1752183 + (TA)n Simple_repeat Simple_repeat 1 81 0 1 742 486 155 0 0 chrX 20671368 20671465 -1751362 + (TA)n Simple_repeat Simple_repeat 2 98 0 1 742 24 0 0 0 chrX 20671675 20671699 -1751128 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 25 31 0 0 chrX 20671762 20671794 -1751033 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 201 74 0 0 chrX 20674397 20674424 -1748403 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 742 225 164 0 68 chrX 20674696 20674755 -1748072 + T-rich Low_complexity Low_complexity 2 56 0 1 742 242 228 0 0 chrX 20676020 20676077 -1746750 + T-rich Low_complexity Low_complexity 1 57 0 1 742 535 45 0 0 chrX 20677158 20677225 -1745602 + DNAREP1_DM LINE Penelope 1 67 -527 1 742 23 0 0 0 chrX 20677256 20677279 -1745548 + AT_rich Low_complexity Low_complexity 1 23 0 1 742 1197 86 166 53 chrX 20677279 20677526 -1745301 + DNAREP1_DM LINE Penelope 315 589 -5 1 742 24 0 0 0 chrX 20679786 20679810 -1743017 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 24 0 0 0 chrX 20681859 20681883 -1740944 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 21 0 0 0 chrX 20682212 20682233 -1740594 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 213 235 24 24 chrX 20683961 20684044 -1738783 + A-rich Low_complexity Low_complexity 2 84 0 1 742 233 232 0 0 chrX 20684125 20684181 -1738646 + A-rich Low_complexity Low_complexity 1 56 0 1 742 204 125 0 0 chrX 20685705 20685737 -1737090 + (AAATG)n Simple_repeat Simple_repeat 4 35 0 1 742 808 172 187 0 chrX 20692631 20692829 -1729998 - DNAREP1_DM LINE Penelope 0 594 360 1 742 200 167 0 0 chrX 20694271 20694301 -1728526 + G-rich Low_complexity Low_complexity 6 35 0 1 742 24 0 0 0 chrX 20694908 20694932 -1727895 + AT_rich Low_complexity Low_complexity 1 24 0 1 742 23 33 0 0 chrX 20697381 20697411 -1725416 + GC_rich Low_complexity Low_complexity 1 30 0 1 742 349 253 16 75 chrX 20697587 20697775 -1725052 + (CTTG)n Simple_repeat Simple_repeat 3 179 0 1 742 247 284 0 0 chrX 20698105 20698179 -1724648 + (CCTG)n Simple_repeat Simple_repeat 4 77 0 1 742 26 30 0 0 chrX 20698747 20698780 -1724047 + AT_rich Low_complexity Low_complexity 1 33 0 1 742 366 129 0 0 chrX 20699884 20699946 -1722881 + (ACTG)n Simple_repeat Simple_repeat 4 65 0 1 742 228 35 0 0 chrX 20703852 20703881 -1718946 + (A)n Simple_repeat Simple_repeat 1 29 0 1 742 3742 2 0 0 chrX 20707807 20708235 -1714592 + ROO_LTR LTR Pao 1 428 0 1 92 50120 2 2 0 chrX 20708235 20714141 -1708686 + ROO_I LTR Pao 1 5920 -2336 1 743 6286 19 0 1 chrX 20714138 20714924 -1707903 + ROO_I LTR Pao 7472 8256 0 1 743 3709 7 0 0 chrX 20714924 20715352 -1707475 + ROO_LTR LTR Pao 1 428 0 1 743 234 160 0 0 chrX 20716369 20716419 -1706408 + T-rich Low_complexity Low_complexity 1 50 0 1 743 192 77 0 0 chrX 20717736 20717762 -1705065 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 743 279 54 0 0 chrX 20720942 20720979 -1701848 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 743 231 204 0 0 chrX 20722357 20722406 -1700421 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 743 29 0 0 0 chrX 20722702 20722731 -1700096 + AT_rich Low_complexity Low_complexity 1 29 0 1 743 225 188 0 0 chrX 20725297 20725345 -1697482 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 743 214 205 0 0 chrX 20727674 20727713 -1695114 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 743 738 137 28 157 chrX 20727786 20728003 -1694824 + DNAREP1_DM LINE Penelope 127 315 -279 1 743 543 140 0 31 chrX 20728019 20728115 -1694712 + DNAREP1_DM LINE Penelope 502 594 0 1 743 286 213 116 55 chrX 20730700 20730864 -1691963 - Gypsy12A_LTR LTR Gypsy -35 2245 2072 1 743 186 71 0 0 chrX 20732482 20732510 -1690317 + (T)n Simple_repeat Simple_repeat 1 28 0 1 743 189 0 0 0 chrX 20732884 20732905 -1689922 + (GAA)n Simple_repeat Simple_repeat 2 22 0 1 743 222 225 0 0 chrX 20734657 20734737 -1688090 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 743 348 77 0 0 chrX 20735230 20735282 -1687545 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 743 21 0 0 0 chrX 20735322 20735343 -1687484 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 207 0 0 0 chrX 20735809 20735832 -1686995 + (A)n Simple_repeat Simple_repeat 1 23 0 1 743 189 74 0 0 chrX 20736082 20736109 -1686718 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 743 189 74 0 0 chrX 20736148 20736175 -1686652 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 743 23 0 0 0 chrX 20738898 20738921 -1683906 + AT_rich Low_complexity Low_complexity 1 23 0 1 743 229 191 0 0 chrX 20743059 20743101 -1679726 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 743 183 220 0 0 chrX 20743249 20743299 -1679528 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 743 260 146 0 35 chrX 20744758 20744815 -1678012 - HSATII Satellite Satellite -81 89 35 1 743 237 83 0 0 chrX 20745572 20745608 -1677219 + (A)n Simple_repeat Simple_repeat 1 36 0 1 743 30 45 0 0 chrX 20747414 20747458 -1675369 + AT_rich Low_complexity Low_complexity 1 44 0 1 743 1933 112 204 8 chrX 20751147 20751643 -1671184 + DNAREP1_DM LINE Penelope 1 594 0 1 743 22 0 0 0 chrX 20751650 20751672 -1671155 + AT_rich Low_complexity Low_complexity 1 22 0 1 743 252 59 72 14 chrX 20751791 20751860 -1670967 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 743 261 83 0 0 chrX 20754461 20754497 -1668330 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 743 26 30 0 0 chrX 20755023 20755056 -1667771 + AT_rich Low_complexity Low_complexity 1 33 0 1 743 231 204 0 0 chrX 20755857 20755911 -1666916 + CT-rich Low_complexity Low_complexity 5 58 0 1 743 210 71 0 0 chrX 20756567 20756595 -1666232 + (T)n Simple_repeat Simple_repeat 1 28 0 1 743 229 283 0 16 chrX 20756684 20756745 -1666082 + (CATA)n Simple_repeat Simple_repeat 1 60 0 1 743 25 31 0 0 chrX 20759460 20759492 -1663335 + AT_rich Low_complexity Low_complexity 1 32 0 1 743 198 0 0 0 chrX 20759852 20759874 -1662953 + (T)n Simple_repeat Simple_repeat 1 22 0 1 743 288 300 20 10 chrX 20761740 20761841 -1660986 - DNAREP1_DM LINE Penelope -148 446 345 1 743 21 36 0 0 chrX 20762385 20762413 -1660414 + AT_rich Low_complexity Low_complexity 1 28 0 1 743 366 42 0 0 chrX 20762968 20763016 -1659811 + (ATG)n Simple_repeat Simple_repeat 1 48 0 1 743 183 42 0 0 chrX 20764797 20764821 -1658006 + (T)n Simple_repeat Simple_repeat 1 24 0 1 743 2114 96 102 6 chrX 20765745 20766102 -1656725 + DNAREP1_DM LINE Penelope 80 594 0 1 743 212 271 0 33 chrX 20768472 20768533 -1654294 + (TTCGGG)n Simple_repeat Simple_repeat 1 59 0 1 743 213 331 14 21 chrX 20769805 20769947 -1652880 + (CTG)n Simple_repeat Simple_repeat 3 143 0 1 743 23 0 0 0 chrX 20773803 20773826 -1649001 + AT_rich Low_complexity Low_complexity 1 23 0 1 743 29 60 0 0 chrX 20774366 20774416 -1648411 + AT_rich Low_complexity Low_complexity 1 50 0 1 743 207 262 0 0 chrX 20775125 20775167 -1647660 + (TGGG)n Simple_repeat Simple_repeat 2 43 0 1 743 21 0 0 0 chrX 20775286 20775307 -1647520 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 204 218 18 0 chrX 20775996 20776051 -1646776 + (ATG)n Simple_repeat Simple_repeat 3 58 0 1 743 21 0 0 0 chrX 20776851 20776872 -1645955 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 309 151 0 0 chrX 20777469 20777522 -1645305 + (CGG)n Simple_repeat Simple_repeat 2 54 0 1 743 201 132 0 0 chrX 20777643 20777681 -1645146 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 1 743 21 0 0 0 chrX 20777841 20777862 -1644965 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 245 236 0 0 chrX 20778868 20778923 -1643904 + (GCTG)n Simple_repeat Simple_repeat 4 58 0 1 743 246 167 0 0 chrX 20779362 20779422 -1643405 + (CCAA)n Simple_repeat Simple_repeat 4 63 0 1 743 25 0 0 0 chrX 20780682 20780707 -1642120 + AT_rich Low_complexity Low_complexity 1 25 0 1 743 258 32 0 0 chrX 20787696 20787727 -1635100 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 743 213 39 0 0 chrX 20787945 20787971 -1634856 + (AATTG)n Simple_repeat Simple_repeat 4 29 0 1 743 273 278 4 50 chrX 20788076 20788337 -1634490 + T-rich Low_complexity Low_complexity 1 249 0 1 743 21 100 0 0 chrX 20788357 20788427 -1634400 + AT_rich Low_complexity Low_complexity 1 70 0 1 743 452 146 0 11 chrX 20789200 20789290 -1633537 + (TA)n Simple_repeat Simple_repeat 2 90 0 1 743 24 0 0 0 chrX 20790415 20790439 -1632388 + AT_rich Low_complexity Low_complexity 1 24 0 1 743 25 0 0 0 chrX 20790887 20790912 -1631915 + AT_rich Low_complexity Low_complexity 1 25 0 1 743 22 56 0 0 chrX 20790944 20790980 -1631847 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 198 0 0 0 chrX 20791414 20791436 -1631391 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 743 186 43 0 0 chrX 20791750 20791773 -1631054 + (A)n Simple_repeat Simple_repeat 1 23 0 1 743 30 27 0 0 chrX 20792235 20792272 -1630555 + AT_rich Low_complexity Low_complexity 1 37 0 1 743 27 62 0 0 chrX 20793659 20793707 -1629120 + AT_rich Low_complexity Low_complexity 1 48 0 1 743 201 158 0 0 chrX 20794204 20794242 -1628585 + A-rich Low_complexity Low_complexity 1 38 0 1 743 286 261 0 0 chrX 20794816 20794885 -1627942 + (CGTG)n Simple_repeat Simple_repeat 4 72 0 1 743 194 62 31 0 chrX 20794938 20794970 -1627857 + (TTCCG)n Simple_repeat Simple_repeat 3 35 0 1 743 38 75 0 0 chrX 20796639 20796719 -1626108 + AT_rich Low_complexity Low_complexity 1 80 0 1 743 23 33 0 0 chrX 20796769 20796799 -1626028 + AT_rich Low_complexity Low_complexity 1 30 0 1 743 226 152 17 17 chrX 20797900 20797960 -1624867 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 743 551 60 0 87 chrX 20799996 20800088 -1622739 - DNAREP1_DM LINE Penelope -110 484 401 1 743 503 202 0 0 chrX 20800675 20800789 -1622038 - DNAREP1_DM LINE Penelope -470 124 11 1 743 1144 176 84 84 chrX 20801527 20801894 -1620933 - DNAREP1_DM LINE Penelope 0 594 228 1 743 240 35 0 0 chrX 20810427 20810456 -1612371 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 743 21 36 0 0 chrX 20810641 20810669 -1612158 + AT_rich Low_complexity Low_complexity 1 28 0 1 743 21 0 0 0 chrX 20811503 20811524 -1611303 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 4353 0 0 10 chrX 20811804 20812308 -1610519 - HOBO DNA hAT 0 3016 2518 1 743 7959 1 0 0 chrX 20812306 20813210 -1609617 - HOBO DNA hAT -2112 904 1 1 743 282 56 0 0 chrX 20813282 20813318 -1609509 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 743 34 0 0 0 chrX 20814512 20814546 -1608281 + AT_rich Low_complexity Low_complexity 1 34 0 1 743 201 74 0 0 chrX 20815983 20816010 -1606817 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 743 21 0 0 0 chrX 20816623 20816644 -1606183 + AT_rich Low_complexity Low_complexity 1 21 0 1 743 363 44 0 0 chrX 20817225 20817270 -1605557 + (CAG)n Simple_repeat Simple_repeat 2 46 0 1 743 26 0 0 0 chrX 20820298 20820324 -1602503 + AT_rich Low_complexity Low_complexity 1 26 0 1 743 26 0 0 0 chrX 20821862 20821888 -1600939 + AT_rich Low_complexity Low_complexity 1 26 0 1 743 210 116 0 44 chrX 20821928 20821973 -1600854 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 743 258 164 0 0 chrX 20823557 20823612 -1599215 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 743 210 196 22 0 chrX 20824361 20824407 -1598420 + (TTG)n Simple_repeat Simple_repeat 1 47 0 1 743 192 245 0 0 chrX 20824504 20824557 -1598270 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 743 737 168 304 30 chrX 20827488 20827824 -1595003 + DNAREP1_DM LINE Penelope 17 444 -150 1 743 189 0 0 0 chrX 20828063 20828084 -1594743 + (TTA)n Simple_repeat Simple_repeat 3 23 0 1 743 44206 1 0 0 chrX 20828084 20833443 -1589384 - I_DM LINE I -774 5457 99 1 743 32 57 0 0 chrX 20833639 20833692 -1589135 + AT_rich Low_complexity Low_complexity 1 53 0 1 743 350 168 39 29 chrX 20835023 20835127 -1587700 + DNAREP1_DM LINE Penelope 231 335 -259 1 743 280 152 0 0 chrX 20835181 20835227 -1587600 + DNAREP1_DM LINE Penelope 514 559 -35 1 743 195 42 0 0 chrX 20839568 20839592 -1583235 + (TATG)n Simple_repeat Simple_repeat 3 26 0 1 744 23 68 0 0 chrX 20844239 20844283 -1578544 + AT_rich Low_complexity Low_complexity 1 44 0 1 744 218 266 16 0 chrX 20844719 20844783 -1578044 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 744 26 50 0 0 chrX 20844954 20844994 -1577833 + AT_rich Low_complexity Low_complexity 1 40 0 1 744 22 56 0 0 chrX 20845894 20845930 -1576897 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 210 37 0 0 chrX 20848982 20849009 -1573818 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 744 215 79 0 26 chrX 20852282 20852321 -1570506 + (GTCTG)n Simple_repeat Simple_repeat 5 42 0 1 744 21 0 0 0 chrX 20861521 20861542 -1561285 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 212 207 17 17 chrX 20862212 20862271 -1560556 + (CATATA)n Simple_repeat Simple_repeat 3 61 0 1 744 27 49 0 0 chrX 20864301 20864342 -1558485 + AT_rich Low_complexity Low_complexity 1 41 0 1 744 498 161 0 0 chrX 20867163 20867256 -1555571 + (TA)n Simple_repeat Simple_repeat 2 94 0 1 744 30 0 0 0 chrX 20867477 20867507 -1555320 + AT_rich Low_complexity Low_complexity 1 30 0 1 744 377 167 119 0 chrX 20867544 20867628 -1555199 - DNAREP1_DM LINE Penelope -64 530 437 1 744 25 31 0 0 chrX 20867972 20868004 -1554823 + AT_rich Low_complexity Low_complexity 1 32 0 1 744 189 0 0 0 chrX 20868394 20868415 -1554412 + (T)n Simple_repeat Simple_repeat 1 21 0 1 744 35 0 0 0 chrX 20869155 20869190 -1553637 + AT_rich Low_complexity Low_complexity 1 35 0 1 744 201 39 0 0 chrX 20869973 20869999 -1552828 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 1 744 234 62 0 0 chrX 20870282 20870314 -1552513 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1 744 186 143 0 0 chrX 20870954 20870989 -1551838 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 744 198 103 0 0 chrX 20872240 20872269 -1550558 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 744 189 94 0 0 chrX 20872400 20872432 -1550395 + (TAA)n Simple_repeat Simple_repeat 1 32 0 1 744 46 33 0 0 chrX 20872608 20872668 -1550159 + AT_rich Low_complexity Low_complexity 1 60 0 1 744 234 0 0 0 chrX 20872853 20872879 -1549948 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 744 2288 131 158 26 chrX 20873451 20873959 -1548868 - DNAREP1_DM LINE Penelope 0 594 20 1 744 51 70 0 0 chrX 20873966 20874066 -1548761 + AT_rich Low_complexity Low_complexity 1 100 0 1 744 204 231 0 0 chrX 20874406 20874445 -1548382 + CT-rich Low_complexity Low_complexity 2 40 0 1 744 31 0 0 0 chrX 20875361 20875392 -1547435 + AT_rich Low_complexity Low_complexity 1 31 0 1 744 1874 118 156 6 chrX 20875479 20875961 -1546866 + DNAREP1_DM LINE Penelope 1 594 0 1 744 411 158 0 0 chrX 20877008 20877084 -1545743 + DNAREP1_DM LINE Penelope 11 86 -508 1 744 649 125 98 32 chrX 20877239 20877392 -1545435 + DNAREP1_DM LINE Penelope 79 360 -234 1 744 694 78 8 57 chrX 20877403 20877525 -1545302 + DNAREP1_DM LINE Penelope 479 594 0 1 744 198 91 0 0 chrX 20880137 20880170 -1542657 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 744 217 231 0 0 chrX 20880254 20880306 -1542521 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 744 186 150 0 0 chrX 20880332 20880372 -1542455 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 744 204 277 0 0 chrX 20880435 20880482 -1542345 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 744 21 57 0 0 chrX 20880807 20880842 -1541985 + AT_rich Low_complexity Low_complexity 1 35 0 1 744 279 93 0 0 chrX 20881410 20881453 -1541374 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 744 260 250 16 0 chrX 20881849 20881913 -1540914 + (CAG)n Simple_repeat Simple_repeat 3 67 0 1 744 24 0 0 0 chrX 20882471 20882495 -1540332 + AT_rich Low_complexity Low_complexity 1 24 0 1 744 183 139 0 0 chrX 20883461 20883497 -1539330 + (A)n Simple_repeat Simple_repeat 1 36 0 1 744 181 62 123 0 chrX 20883774 20883839 -1538988 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 744 21 0 0 0 chrX 20885753 20885774 -1537053 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 267 146 0 0 chrX 20886067 20886122 -1536705 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 744 215 255 0 0 chrX 20886314 20886365 -1536462 + A-rich Low_complexity Low_complexity 1 51 0 1 744 495 0 0 0 chrX 20887416 20887471 -1535356 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 744 22 70 0 0 chrX 20890291 20890334 -1532493 + AT_rich Low_complexity Low_complexity 1 43 0 1 744 259 219 0 68 chrX 20890477 20890565 -1532262 + T-rich Low_complexity Low_complexity 2 83 0 1 744 254 200 17 0 chrX 20890861 20890921 -1531906 + (CAA)n Simple_repeat Simple_repeat 1 61 0 1 744 377 222 72 29 chrX 20891389 20891528 -1531299 + DNAREP1_DM LINE Penelope 422 566 -28 1 744 23 0 0 0 chrX 20896846 20896869 -1525958 + AT_rich Low_complexity Low_complexity 1 23 0 1 744 22 0 0 0 chrX 20899458 20899480 -1523347 + AT_rich Low_complexity Low_complexity 1 22 0 1 744 22 35 0 0 chrX 20900944 20900973 -1521854 + AT_rich Low_complexity Low_complexity 1 29 0 1 744 203 0 37 0 chrX 20903384 20903411 -1519416 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 744 28 0 0 0 chrX 20903700 20903728 -1519099 + AT_rich Low_complexity Low_complexity 1 28 0 1 744 27 81 0 0 chrX 20903835 20903897 -1518930 + AT_rich Low_complexity Low_complexity 1 62 0 1 744 2620 112 102 27 chrX 20903906 20904384 -1518443 - QUASIMODO_LTR LTR Gypsy -69 589 76 1 744 2446 14 88 0 chrX 20904384 20904668 -1518159 + PROTOP_A DNA P 1 309 -796 1 744 1065 67 7 0 chrX 20904666 20904801 -1518026 + DMRT1C LINE R1 5308 5443 0 1 744 869 88 0 0 chrX 20904830 20904943 -1517884 + DMRT1C LINE R1 1 113 -5330 1 744 985 148 308 0 chrX 20904937 20905199 -1517628 + DMRT1C LINE R1 567 908 -4535 1 744 1902 141 101 3 chrX 20905198 20905525 -1517302 + DMRT1C LINE R1 1146 1504 -3939 1 744 512 68 13 13 chrX 20905581 20905656 -1517171 + R1_DM LINE R1 3807 3881 -1475 1 744 33 0 0 0 chrX 20905978 20906011 -1516816 + AT_rich Low_complexity Low_complexity 1 33 0 1 744 1732 94 86 0 chrX 20907985 20908240 -1514587 - DNAREP1_DM LINE Penelope 0 594 318 1 744 264 131 410 0 chrX 20908251 20908312 -1514515 - DNAREP1_DM LINE Penelope -508 86 1 1 744 23 0 0 0 chrX 20909220 20909243 -1513584 + AT_rich Low_complexity Low_complexity 1 23 0 1 744 228 122 0 0 chrX 20910055 20910096 -1512731 + (A)n Simple_repeat Simple_repeat 1 41 0 1 744 234 0 0 0 chrX 20911287 20911313 -1511514 + (T)n Simple_repeat Simple_repeat 1 26 0 1 744 21 0 0 0 chrX 20912200 20912221 -1510606 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 21 57 0 0 chrX 20912345 20912380 -1510447 + AT_rich Low_complexity Low_complexity 1 35 0 1 744 32 0 0 0 chrX 20913852 20913884 -1508943 + AT_rich Low_complexity Low_complexity 1 32 0 1 744 203 200 0 0 chrX 20915517 20915552 -1507275 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 744 24 0 0 0 chrX 20915821 20915845 -1506982 + AT_rich Low_complexity Low_complexity 1 24 0 1 744 30 27 0 0 chrX 20916035 20916072 -1506755 + AT_rich Low_complexity Low_complexity 1 37 0 1 744 25 0 0 0 chrX 20916758 20916783 -1506044 + AT_rich Low_complexity Low_complexity 1 25 0 1 744 24 32 0 0 chrX 20917091 20917122 -1505705 + AT_rich Low_complexity Low_complexity 1 31 0 1 744 31 58 0 0 chrX 20920229 20920281 -1502546 + AT_rich Low_complexity Low_complexity 1 52 0 1 744 201 162 0 0 chrX 20925477 20925514 -1497313 + GA-rich Low_complexity Low_complexity 1 37 0 1 744 22 35 0 0 chrX 20926741 20926770 -1496057 + AT_rich Low_complexity Low_complexity 1 29 0 1 744 219 36 0 0 chrX 20927825 20927853 -1494974 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 744 231 219 14 0 chrX 20928965 20929038 -1493789 + T-rich Low_complexity Low_complexity 2 75 0 1 744 30 0 0 0 chrX 20930751 20930781 -1492046 + AT_rich Low_complexity Low_complexity 1 30 0 1 744 243 0 0 0 chrX 20932613 20932640 -1490187 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 744 4002 2 0 0 chrX 20932945 20933373 -1489454 - ROO_LTR LTR Pao 0 428 1 1 744 259 96 70 35 chrX 20933381 20933467 -1489360 + T-rich Low_complexity Low_complexity 3 91 0 1 744 244 319 0 0 chrX 20934909 20934978 -1487849 + (CTG)n Simple_repeat Simple_repeat 1 69 0 1 744 233 288 0 0 chrX 20935260 20935319 -1487508 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 1 744 210 37 0 0 chrX 20938007 20938034 -1484793 + (GGA)n Simple_repeat Simple_repeat 2 28 0 1 744 26 30 0 0 chrX 20940816 20940849 -1481978 + AT_rich Low_complexity Low_complexity 1 33 0 1 744 222 211 0 0 chrX 20942143 20942181 -1480646 + (TATG)n Simple_repeat Simple_repeat 4 41 0 1 744 186 71 0 0 chrX 20943834 20943862 -1478965 + (T)n Simple_repeat Simple_repeat 1 28 0 1 744 21 0 0 0 chrX 20947582 20947603 -1475224 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 273 140 0 0 chrX 20948024 20948081 -1474746 + (CAA)n Simple_repeat Simple_repeat 2 58 0 1 744 22 0 0 0 chrX 20952213 20952235 -1470592 + AT_rich Low_complexity Low_complexity 1 22 0 1 744 213 175 0 0 chrX 20952318 20952358 -1470469 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 1 744 237 108 0 0 chrX 20953314 20953351 -1469476 + (CAAAC)n Simple_repeat Simple_repeat 3 39 0 1 744 8701 3 0 9 chrX 20957228 20958183 -1464644 - LINEJ1_DM LINE Jockey 0 5020 4075 1 744 234 105 0 0 chrX 20958501 20958539 -1464288 + (T)n Simple_repeat Simple_repeat 1 38 0 1 744 471 162 103 19 chrX 20959284 20959391 -1463436 - DNAREP1_DM LINE Penelope 0 594 479 1 744 728 98 8 97 chrX 20959410 20959575 -1463252 - DNAREP1_DM LINE Penelope -306 288 36 1 744 920 103 14 14 chrX 20961257 20961395 -1461432 + DMRP1 Unknown Unknown 2 139 -207 1 744 192 97 0 0 chrX 20962740 20962771 -1460056 + (A)n Simple_repeat Simple_repeat 1 31 0 1 744 357 176 0 0 chrX 20963960 20964034 -1458793 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 744 225 65 0 0 chrX 20964730 20964761 -1458066 + (CAG)n Simple_repeat Simple_repeat 2 32 0 1 744 215 159 0 22 chrX 20964940 20964985 -1457842 + T-rich Low_complexity Low_complexity 1 44 0 1 744 201 197 0 0 chrX 20965190 20965256 -1457571 + (CAG)n Simple_repeat Simple_repeat 3 68 0 1 744 248 162 0 81 chrX 20965414 20965501 -1457326 + ROO_I LTR Pao 658 737 -7519 1 744 263 231 0 0 chrX 20965541 20965606 -1457221 + (CAG)n Simple_repeat Simple_repeat 3 67 0 1 744 218 149 12 75 chrX 20966625 20966705 -1456122 + (TTAAA)n Simple_repeat Simple_repeat 5 79 0 1 744 312 93 222 0 chrX 20967106 20967160 -1455667 - DNAREP1_DM LINE Penelope -20 574 509 1 744 5904 13 1 0 chrX 20967218 20967888 -1454939 + S_DM DNA Tc1 1066 1736 0 1 744 1481 87 224 11 chrX 20968086 20968354 -1454473 + DNAREP1_DM LINE Penelope 270 594 0 1 744 21 36 0 0 chrX 20968494 20968522 -1454305 + AT_rich Low_complexity Low_complexity 1 28 0 1 744 1838 148 245 9 chrX 20970818 20971283 -1451544 - DNAREP1_DM LINE Penelope -20 574 1 1 745 21 0 0 0 chrX 20971683 20971704 -1451123 + AT_rich Low_complexity Low_complexity 1 21 0 1 745 32 0 0 0 chrX 20971871 20971903 -1450924 + AT_rich Low_complexity Low_complexity 1 32 0 1 745 24 0 0 0 chrX 20974875 20974899 -1447928 + AT_rich Low_complexity Low_complexity 1 24 0 1 745 183 139 0 0 chrX 20975278 20975314 -1447513 + (T)n Simple_repeat Simple_repeat 1 36 0 1 745 198 0 0 0 chrX 20976507 20976529 -1446298 + (GAA)n Simple_repeat Simple_repeat 2 23 0 1 745 289 243 28 14 chrX 20976561 20976632 -1446195 - DNAREP1_DM LINE Penelope -150 444 373 1 745 366 227 0 0 chrX 20980356 20980431 -1442396 + DNAREP1_DM LINE Penelope 1 75 -519 1 745 208 231 0 0 chrX 20981221 20981273 -1441554 + GA-rich Low_complexity Low_complexity 2 53 0 1 745 716 109 0 14 chrX 20986913 20987053 -1435774 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 745 265 24 48 0 chrX 20988757 20988799 -1434028 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 745 28 29 0 0 chrX 20989284 20989319 -1433508 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 26 0 0 0 chrX 20992731 20992757 -1430070 + AT_rich Low_complexity Low_complexity 1 26 0 1 745 33 0 0 0 chrX 20993747 20993780 -1429047 + AT_rich Low_complexity Low_complexity 1 33 0 1 745 234 0 0 0 chrX 20995106 20995132 -1427695 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1 745 21 36 0 0 chrX 20995876 20995904 -1426923 + AT_rich Low_complexity Low_complexity 1 28 0 1 745 641 83 0 0 chrX 20996536 20996620 -1426207 - DNAREP1_DM LINE Penelope -3 591 508 1 745 189 107 0 0 chrX 20996622 20996650 -1426177 + (TATG)n Simple_repeat Simple_repeat 2 29 0 1 745 801 163 99 37 chrX 20996709 20996900 -1425927 - DNAREP1_DM LINE Penelope -391 203 1 1 745 21 0 0 0 chrX 20997220 20997241 -1425586 + AT_rich Low_complexity Low_complexity 1 21 0 1 745 25 51 0 0 chrX 20998424 20998463 -1424364 + AT_rich Low_complexity Low_complexity 1 39 0 1 745 21 57 0 0 chrX 20999903 20999938 -1422889 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 372 138 0 0 chrX 21000075 21000140 -1422687 + DNAREP1_DM LINE Penelope 116 180 -414 1 745 1044 124 94 49 chrX 21000149 21000352 -1422475 + DNAREP1_DM LINE Penelope 383 594 0 1 745 228 135 0 0 chrX 21000762 21000799 -1422028 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 745 1134 93 205 10 chrX 21001345 21001540 -1421287 - DNAREP1_DM LINE Penelope 0 594 362 1 745 748 130 0 130 chrX 21001541 21001726 -1421101 - DNAREP1_DM LINE Penelope -433 161 1 1 745 22 0 0 0 chrX 21003227 21003249 -1419578 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 413 131 0 0 chrX 21003990 21004051 -1418776 - DNAREP1_DM LINE Penelope -34 560 500 1 745 578 15 15 0 chrX 21004086 21004152 -1418675 - DNAREP1_DM LINE Penelope -526 68 2 1 745 21 36 0 0 chrX 21006084 21006112 -1416715 + AT_rich Low_complexity Low_complexity 1 28 0 1 745 22 0 0 0 chrX 21007016 21007038 -1415789 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 34 0 0 0 chrX 21010018 21010052 -1412775 + AT_rich Low_complexity Low_complexity 1 34 0 1 745 22 0 0 0 chrX 21012287 21012309 -1410518 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 246 114 0 0 chrX 21012335 21012370 -1410457 + DNAREP1_DM LINE Penelope 405 439 -155 1 745 1973 129 11 24 chrX 21018110 21018479 -1404348 - DNAREP1_DM LINE Penelope -267 327 1 1 745 332 146 0 0 chrX 21018493 21018548 -1404279 + R1_DM LINE R1 225 279 -5077 1 745 5261 149 195 16 chrX 21018594 21019681 -1403146 + R1_DM LINE R1 560 1841 -3515 1 745 3555 74 22 0 chrX 21019679 21020140 -1402687 + R1_DM LINE R1 2126 2596 -2760 1 745 1721 109 0 4 chrX 21020138 21020396 -1402431 - DMRT1C LINE R1 -2262 3181 2925 1 745 1662 104 157 6 chrX 21020388 21020879 -1401948 - DMRT1C LINE R1 -2956 2487 1923 1 745 236 161 0 16 chrX 21021438 21021501 -1401326 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 1 745 254 98 0 0 chrX 21022399 21022450 -1400377 + DNAREP1_DM LINE Penelope 218 268 -326 1 745 1347 115 46 9 chrX 21022458 21022677 -1400150 + DNAREP1_DM LINE Penelope 219 445 -149 1 745 22 0 0 0 chrX 21022752 21022774 -1400053 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 1285 121 87 0 chrX 21023822 21024028 -1398799 + DNAREP1_DM LINE Penelope 371 594 0 1 745 1554 18 0 0 chrX 21024157 21024484 -1398343 + (TTA)n Simple_repeat Simple_repeat 1 327 0 1 745 5682 99 39 38 chrX 21024868 21025763 -1397064 - Mariner2_DM DNA Tc1 0 912 17 1 745 586 149 0 76 chrX 21025761 21025892 -1396935 + PROTOP_B DNA P 1033 1153 0 1 745 375 205 0 0 chrX 21027748 21027826 -1395001 - LINEJ1_DM LINE Jockey -296 4724 4647 1 745 1010 148 0 12 chrX 21027831 21027995 -1394832 - LINEJ1_DM LINE Jockey -782 4238 4077 1 745 794 118 14 14 chrX 21027980 21028118 -1394709 + DMRT1C LINE R1 3641 3778 -1665 1 745 1454 201 87 54 chrX 21028527 21028954 -1393873 - DM297_I LTR Gypsy -3046 3121 2681 1 745 2040 131 42 74 chrX 21028944 21029374 -1393453 - DNAREP1_DM LINE Penelope -93 501 86 1 745 1763 135 47 22 chrX 21029379 21029698 -1393129 - DNAREP1_DM LINE Penelope -267 327 1 1 745 332 146 0 0 chrX 21029712 21029767 -1393060 + R1_DM LINE R1 225 279 -5077 1 745 5261 149 195 16 chrX 21029813 21030900 -1391927 + R1_DM LINE R1 560 1841 -3515 1 745 3524 78 22 0 chrX 21030898 21031359 -1391468 + R1_DM LINE R1 2126 2596 -2760 1 745 1721 109 0 4 chrX 21031357 21031615 -1391212 - DMRT1C LINE R1 -2262 3181 2925 1 745 1662 104 157 6 chrX 21031607 21032098 -1390729 - DMRT1C LINE R1 -2956 2487 1923 1 745 236 161 0 16 chrX 21032614 21032677 -1390150 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 1 745 254 98 0 0 chrX 21033575 21033626 -1389201 + DNAREP1_DM LINE Penelope 218 268 -326 1 745 1347 115 46 9 chrX 21033634 21033853 -1388974 + DNAREP1_DM LINE Penelope 219 445 -149 1 745 22 0 0 0 chrX 21033928 21033950 -1388877 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 1261 133 69 0 chrX 21035001 21035204 -1387623 + DNAREP1_DM LINE Penelope 378 594 0 1 745 1587 14 0 0 chrX 21035333 21035630 -1387197 + (TTA)n Simple_repeat Simple_repeat 1 297 0 1 745 5682 99 39 38 chrX 21036014 21036909 -1385918 - Mariner2_DM DNA Tc1 0 912 17 1 745 586 149 0 76 chrX 21036907 21037038 -1385789 + PROTOP_B DNA P 1033 1153 0 1 745 23 0 0 0 chrX 21037270 21037293 -1385534 + AT_rich Low_complexity Low_complexity 1 23 0 1 745 231 171 0 0 chrX 21041674 21041715 -1381112 - DNAREP1_DM LINE Penelope -158 436 396 1 745 22 0 0 0 chrX 21041732 21041754 -1381073 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 314 182 117 39 chrX 21042003 21042106 -1380721 + Gypsy_LTR LTR Gypsy 143 253 -229 1 745 750 82 0 0 chrX 21042539 21042637 -1380190 + Jockey2 LINE Jockey 1 98 -3330 1 745 346 98 0 0 chrX 21042654 21042705 -1380122 + Jockey2 LINE Jockey 200 250 -3178 1 745 9925 45 5 4 chrX 21042690 21043887 -1378940 + Jockey2 LINE Jockey 1302 2499 -929 1 745 5383 28 144 4 chrX 21043888 21044608 -1378219 + FB4_DM DNA Tc1 1 821 -3268 1 745 2921 9 30 0 chrX 21044616 21044950 -1377877 - FB4_DM DNA Tc1 -3745 344 1 1 745 6525 68 35 9 chrX 21044951 21045817 -1377010 + Jockey2 LINE Jockey 2541 3428 0 1 745 1467 171 14 14 chrX 21045837 21046127 -1376700 + BS2 LINE Jockey 29 318 -4403 1 745 472 269 60 0 chrX 21046164 21046298 -1376529 - DM412 LTR Gypsy -4382 2515 2374 1 745 563 30 0 0 chrX 21046327 21046393 -1376434 + Gypsy12A_LTR LTR Gypsy 2215 2280 0 1 745 421 97 27 14 chrX 21046754 21046827 -1376000 - DNAREP1_DM LINE Penelope 0 594 521 1 745 1132 104 92 20 chrX 21046844 21047040 -1375787 - DNAREP1_DM LINE Penelope -157 437 228 1 745 53 78 0 0 chrX 21047883 21047999 -1374828 + AT_rich Low_complexity Low_complexity 1 116 0 1 745 3028 134 55 14 chrX 21048380 21048886 -1373941 - DMRT1B LINE R1 -9 5174 4648 1 745 873 148 94 0 chrX 21048888 21049037 -1373790 - DMRT1B LINE R1 -791 4392 4230 1 745 230 276 0 0 chrX 21049835 21049893 -1372934 + C-rich Low_complexity Low_complexity 5 62 0 1 745 189 0 0 0 chrX 21051472 21051493 -1371334 + (G)n Simple_repeat Simple_repeat 1 21 0 1 745 1457 116 283 40 chrX 21051917 21052395 -1370432 + DNAREP1_DM LINE Penelope 1 594 0 1 745 247 167 15 77 chrX 21054886 21054951 -1367876 - DNAREP1_DM LINE Penelope 0 594 534 1 745 27 0 0 0 chrX 21055645 21055672 -1367155 + AT_rich Low_complexity Low_complexity 1 27 0 1 745 2427 162 110 40 chrX 21062288 21062842 -1359985 - DNAREP1_DM LINE Penelope -1 593 1 1 745 216 97 0 0 chrX 21071007 21071038 -1351789 + (CTAG)n Simple_repeat Simple_repeat 2 32 0 1 745 285 118 33 56 chrX 21071310 21071400 -1351427 - ROO_I LTR Pao -7518 738 651 1 745 243 164 0 0 chrX 21072958 21073019 -1349808 + GA-rich Low_complexity Low_complexity 2 62 0 1 745 209 161 0 0 chrX 21074871 21074902 -1347925 + (CTG)n Simple_repeat Simple_repeat 1 31 0 1 745 22 35 0 0 chrX 21075190 21075219 -1347608 + AT_rich Low_complexity Low_complexity 1 29 0 1 745 195 100 0 0 chrX 21075501 21075531 -1347296 + (GAATG)n Simple_repeat Simple_repeat 2 31 0 1 745 226 146 24 0 chrX 21076491 21076532 -1346295 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 1 745 220 274 0 0 chrX 21077477 21077539 -1345288 + (CCA)n Simple_repeat Simple_repeat 3 64 0 1 745 37 0 0 0 chrX 21077899 21077936 -1344891 + AT_rich Low_complexity Low_complexity 1 37 0 1 745 245 228 0 17 chrX 21078097 21078155 -1344672 + (TAG)n Simple_repeat Simple_repeat 3 59 0 1 745 203 262 0 0 chrX 21079717 21079778 -1343049 + A-rich Low_complexity Low_complexity 1 61 0 1 745 21 36 0 0 chrX 21080330 21080358 -1342469 + GC_rich Low_complexity Low_complexity 1 28 0 1 745 216 167 0 0 chrX 21080385 21080433 -1342394 + (CCG)n Simple_repeat Simple_repeat 1 48 0 1 745 189 0 0 0 chrX 21081047 21081068 -1341759 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 745 186 43 0 0 chrX 21081495 21081518 -1341309 + (ATTG)n Simple_repeat Simple_repeat 4 26 0 1 745 24 32 0 0 chrX 21083022 21083053 -1339774 + AT_rich Low_complexity Low_complexity 1 31 0 1 745 324 161 0 0 chrX 21084503 21084565 -1338262 + (TCCG)n Simple_repeat Simple_repeat 2 63 0 1 745 222 276 0 0 chrX 21084929 21085005 -1337822 + A-rich Low_complexity Low_complexity 1 76 0 1 745 223 314 0 0 chrX 21086266 21086336 -1336491 + (CAGC)n Simple_repeat Simple_repeat 4 73 0 1 745 1461 92 205 14 chrX 21087062 21087526 -1335301 + DNAREP1_DM LINE Penelope 1 594 0 1 745 257 197 0 40 chrX 21091850 21091924 -1330903 - ROO_I LTR Pao -7525 731 661 1 745 240 330 0 21 chrX 21092536 21092629 -1330198 + (CATA)n Simple_repeat Simple_repeat 1 91 0 1 745 237 108 0 0 chrX 21093405 21093442 -1329385 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 745 24 96 0 0 chrX 21094675 21094748 -1328079 + AT_rich Low_complexity Low_complexity 1 73 0 1 745 23 33 0 0 chrX 21096814 21096844 -1325983 + AT_rich Low_complexity Low_complexity 1 30 0 1 745 23 0 0 0 chrX 21096916 21096939 -1325888 + AT_rich Low_complexity Low_complexity 1 23 0 1 745 210 37 0 0 chrX 21097337 21097364 -1325463 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 745 207 0 0 0 chrX 21097412 21097435 -1325392 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 745 210 253 11 21 chrX 21099449 21099542 -1323285 + (ATGGTG)n Simple_repeat Simple_repeat 6 97 0 1 745 227 293 0 12 chrX 21101939 21102022 -1320805 + (GAATG)n Simple_repeat Simple_repeat 3 84 0 1 746 21 0 0 0 chrX 21103190 21103211 -1319616 + AT_rich Low_complexity Low_complexity 1 21 0 1 746 441 169 0 0 chrX 21105008 21105091 -1317736 + (CAAA)n Simple_repeat Simple_repeat 4 86 0 1 746 277 237 0 26 chrX 21107514 21107592 -1315235 + GA-rich Low_complexity Low_complexity 1 76 0 1 746 32 0 0 0 chrX 21107882 21107914 -1314913 + AT_rich Low_complexity Low_complexity 1 32 0 1 746 30 27 0 0 chrX 21108174 21108211 -1314616 + AT_rich Low_complexity Low_complexity 1 37 0 1 746 183 42 0 0 chrX 21110433 21110457 -1312370 + (T)n Simple_repeat Simple_repeat 1 24 0 1 746 180 0 0 0 chrX 21111109 21111129 -1311698 + (A)n Simple_repeat Simple_repeat 1 20 0 1 746 312 161 0 0 chrX 21113144 21113206 -1309621 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 746 228 204 20 0 chrX 21114336 21114385 -1308442 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 746 198 128 0 0 chrX 21115474 21115513 -1307314 + (TTGGGG)n Simple_repeat Simple_repeat 4 42 0 1 746 22 0 0 0 chrX 21116361 21116383 -1306444 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 22 35 0 0 chrX 21116606 21116635 -1306192 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 25 65 0 0 chrX 21117957 21118003 -1304824 + AT_rich Low_complexity Low_complexity 1 46 0 1 746 216 0 0 0 chrX 21118574 21118598 -1304229 + (GA)n Simple_repeat Simple_repeat 1 24 0 1 746 21 57 0 0 chrX 21119927 21119962 -1302865 + AT_rich Low_complexity Low_complexity 1 35 0 1 746 25 0 0 0 chrX 21121031 21121056 -1301771 + AT_rich Low_complexity Low_complexity 1 25 0 1 746 24 0 0 0 chrX 21123949 21123973 -1298854 + AT_rich Low_complexity Low_complexity 1 24 0 1 746 270 56 0 0 chrX 21124356 21124392 -1298435 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 746 2541 13 3 10 chrX 21125784 21126097 -1296730 + M4DM DNA Transib 1 311 -1124 1 746 1602 100 8 12 chrX 21126070 21126312 -1296515 + M4DM DNA Transib 1195 1435 0 1 746 267 31 0 0 chrX 21128464 21128496 -1294331 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 746 57 47 0 0 chrX 21131135 21131220 -1291607 + AT_rich Low_complexity Low_complexity 1 85 0 1 746 40 0 0 0 chrX 21132172 21132212 -1290615 + AT_rich Low_complexity Low_complexity 1 40 0 1 746 324 64 0 0 chrX 21132884 21132931 -1289896 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 746 246 62 0 0 chrX 21133673 21133705 -1289122 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 746 194 62 0 30 chrX 21134137 21134170 -1288657 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 1 746 240 154 0 0 chrX 21134460 21134499 -1288328 + DNAREP1_DM LINE Penelope 17 55 -539 1 746 222 37 0 0 chrX 21135630 21135657 -1287170 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 746 277 273 0 0 chrX 21136317 21136383 -1286444 + (CGGA)n Simple_repeat Simple_repeat 2 67 0 1 746 186 43 0 0 chrX 21136458 21136481 -1286346 + (CGGAA)n Simple_repeat Simple_repeat 2 24 0 1 746 202 219 0 0 chrX 21137399 21137440 -1285387 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 746 224 0 65 0 chrX 21138442 21138473 -1284354 + (CATA)n Simple_repeat Simple_repeat 3 35 0 1 746 345 82 0 0 chrX 21141529 21141578 -1281249 + (CAATC)n Simple_repeat Simple_repeat 4 52 0 1 746 21 36 0 0 chrX 21142056 21142084 -1280743 + AT_rich Low_complexity Low_complexity 1 28 0 1 746 24 32 0 0 chrX 21142670 21142701 -1280126 + AT_rich Low_complexity Low_complexity 1 31 0 1 746 565 129 0 23 chrX 21143194 21143281 -1279546 + DNAREP1_DM LINE Penelope 1 85 -509 1 746 504 110 84 84 chrX 21143280 21143399 -1279428 + DNAREP1_DM LINE Penelope 476 594 0 1 746 209 204 0 0 chrX 21145737 21145781 -1277046 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 1 746 207 0 0 0 chrX 21146575 21146598 -1276229 + (TACGG)n Simple_repeat Simple_repeat 2 24 0 1 746 294 73 0 0 chrX 21147919 21147960 -1274867 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 746 224 149 21 0 chrX 21150944 21150991 -1271836 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 746 22 0 0 0 chrX 21151627 21151649 -1271178 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 211 220 0 0 chrX 21151983 21152033 -1270794 + T-rich Low_complexity Low_complexity 1 50 0 1 746 215 225 0 0 chrX 21153194 21153234 -1269593 + (CATA)n Simple_repeat Simple_repeat 4 43 0 1 746 204 179 0 0 chrX 21153342 21153381 -1269446 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 746 24 67 0 0 chrX 21153686 21153731 -1269096 + AT_rich Low_complexity Low_complexity 1 45 0 1 746 21 57 0 0 chrX 21154297 21154332 -1268495 + AT_rich Low_complexity Low_complexity 1 35 0 1 746 225 0 138 0 chrX 21154433 21154462 -1268365 - DNAREP1_DM LINE Penelope -124 470 438 1 746 1714 84 93 18 chrX 21154462 21154742 -1268085 - DNAREP1_DM LINE Penelope -293 301 1 1 746 43 20 0 0 chrX 21155340 21155390 -1267437 + AT_rich Low_complexity Low_complexity 1 50 0 1 746 183 205 0 0 chrX 21155894 21155933 -1266894 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 746 224 21 39 59 chrX 21156102 21156153 -1266674 + (TTATA)n Simple_repeat Simple_repeat 4 53 0 1 746 668 48 0 12 chrX 21156181 21156266 -1266561 - DNAREP1_DM LINE Penelope -510 84 1 1 746 386 276 0 0 chrX 21161726 21161839 -1260988 + DNAREP1_DM LINE Penelope 18 130 -464 1 746 556 99 11 42 chrX 21161839 21161934 -1260893 + DNAREP1_DM LINE Penelope 1 92 -502 1 746 351 181 0 0 chrX 21163619 21163691 -1259136 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 746 22 80 0 0 chrX 21170063 21170113 -1252714 + AT_rich Low_complexity Low_complexity 1 50 0 1 746 23 0 0 0 chrX 21170150 21170173 -1252654 + AT_rich Low_complexity Low_complexity 1 23 0 1 746 354 136 0 0 chrX 21171499 21171558 -1251269 - DNAREP1_DM LINE Penelope 0 594 536 1 746 1846 103 17 47 chrX 21171560 21171915 -1250912 - DNAREP1_DM LINE Penelope -262 332 22 1 746 280 208 0 0 chrX 21172420 21172473 -1250354 - DNAREP1_DM LINE Penelope -541 53 1 1 746 30 0 0 0 chrX 21173074 21173104 -1249723 + AT_rich Low_complexity Low_complexity 1 30 0 1 746 31 0 0 0 chrX 21174458 21174489 -1248338 + AT_rich Low_complexity Low_complexity 1 31 0 1 746 23 68 0 0 chrX 21174607 21174651 -1248176 + AT_rich Low_complexity Low_complexity 1 44 0 1 746 22 35 0 0 chrX 21175678 21175707 -1247120 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 25 0 0 0 chrX 21177020 21177045 -1245782 + AT_rich Low_complexity Low_complexity 1 25 0 1 746 1759 167 195 34 chrX 21180545 21181011 -1241816 + DNAREP1_DM LINE Penelope 1 541 -53 1 746 385 160 136 102 chrX 21183988 21184106 -1238721 + DNAREP1_DM LINE Penelope 369 490 -104 1 746 1949 113 133 50 chrX 21186483 21186924 -1235903 + DNAREP1_DM LINE Penelope 6 594 0 1 746 236 143 18 0 chrX 21195352 21195408 -1227419 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 746 21 0 0 0 chrX 21198779 21198800 -1224027 + AT_rich Low_complexity Low_complexity 1 21 0 1 746 21 36 0 0 chrX 21198925 21198953 -1223874 + AT_rich Low_complexity Low_complexity 1 28 0 1 746 21 71 0 0 chrX 21199058 21199100 -1223727 + AT_rich Low_complexity Low_complexity 1 42 0 1 746 38 0 0 0 chrX 21199656 21199694 -1223133 + AT_rich Low_complexity Low_complexity 1 38 0 1 746 568 50 50 0 chrX 21200060 21200161 -1222666 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 746 201 133 0 0 chrX 21200559 21200589 -1222238 + (TTCGG)n Simple_repeat Simple_repeat 4 33 0 1 746 236 30 0 29 chrX 21200846 21200880 -1221947 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1 746 218 164 0 18 chrX 21200890 21200946 -1221881 + (CGAT)n Simple_repeat Simple_repeat 2 56 0 1 746 390 74 0 0 chrX 21202518 21202572 -1220255 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 746 186 43 0 0 chrX 21202925 21202948 -1219879 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 1 746 404 195 0 0 chrX 21203503 21203580 -1219247 + DNAREP1_DM LINE Penelope 1 77 -517 1 746 40 73 0 0 chrX 21203851 21203933 -1218894 + AT_rich Low_complexity Low_complexity 1 82 0 1 746 370 200 0 0 chrX 21204288 21204393 -1218434 - ROO_I LTR Pao -7513 743 639 1 746 211 254 0 0 chrX 21204411 21204470 -1218357 + (CTG)n Simple_repeat Simple_repeat 3 61 0 1 746 237 182 0 0 chrX 21204867 21204922 -1217905 + (CTG)n Simple_repeat Simple_repeat 1 55 0 1 746 189 74 0 0 chrX 21204961 21204988 -1217839 + (CTG)n Simple_repeat Simple_repeat 3 29 0 1 746 22 0 0 0 chrX 21210254 21210276 -1212551 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 32 57 0 0 chrX 21215722 21215775 -1207052 + AT_rich Low_complexity Low_complexity 1 53 0 1 746 268 189 13 13 chrX 21215877 21215952 -1206875 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 746 22 0 0 0 chrX 21216067 21216089 -1206738 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 228 250 14 0 chrX 21218196 21218268 -1204559 + CT-rich Low_complexity Low_complexity 1 73 0 1 746 192 135 0 0 chrX 21221552 21221589 -1201238 + (CAA)n Simple_repeat Simple_repeat 1 37 0 1 746 191 62 0 59 chrX 21221746 21221780 -1201047 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 746 180 125 0 0 chrX 21221826 21221858 -1200969 + (GGAGAA)n Simple_repeat Simple_repeat 1 32 0 1 746 267 114 0 0 chrX 21221938 21221982 -1200845 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 746 309 89 0 0 chrX 21222527 21222572 -1200255 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 746 323 231 0 0 chrX 21224218 21224296 -1198531 + ROO_I LTR Pao 653 730 -7526 1 746 225 264 0 22 chrX 21225136 21225225 -1197602 + (CAG)n Simple_repeat Simple_repeat 2 88 0 1 746 306 202 0 0 chrX 21225356 21225435 -1197392 + ROO_I LTR Pao 651 729 -7527 1 746 27 0 0 0 chrX 21230456 21230483 -1192344 + AT_rich Low_complexity Low_complexity 1 27 0 1 746 303 202 17 161 chrX 21232779 21232897 -1189930 - DNAREP1_DM LINE Penelope -104 490 390 1 746 1874 102 24 21 chrX 21233372 21233661 -1189166 - DMRP1 Unknown Unknown -54 292 3 1 747 25 31 0 0 chrX 21236801 21236833 -1185994 + AT_rich Low_complexity Low_complexity 1 32 0 1 747 22 0 0 0 chrX 21237562 21237584 -1185243 + AT_rich Low_complexity Low_complexity 1 22 0 1 747 28 29 0 0 chrX 21238236 21238271 -1184556 + AT_rich Low_complexity Low_complexity 1 35 0 1 747 21 36 0 0 chrX 21238300 21238328 -1184499 + AT_rich Low_complexity Low_complexity 1 28 0 1 747 189 178 0 0 chrX 21239887 21239932 -1182895 + T-rich Low_complexity Low_complexity 1 45 0 1 747 252 185 0 0 chrX 21240860 21240914 -1181913 + (CAA)n Simple_repeat Simple_repeat 3 56 0 1 747 225 238 0 0 chrX 21241417 21241480 -1181347 + GA-rich Low_complexity Low_complexity 2 64 0 1 747 22 0 0 0 chrX 21244605 21244627 -1178200 + AT_rich Low_complexity Low_complexity 1 22 0 1 747 198 150 0 0 chrX 21245870 21245910 -1176917 + (A)n Simple_repeat Simple_repeat 1 40 0 1 747 41 48 0 0 chrX 21246829 21246891 -1175936 + AT_rich Low_complexity Low_complexity 1 62 0 1 747 23 0 0 0 chrX 21249874 21249897 -1172930 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 189 147 0 0 chrX 21250774 21250808 -1172019 + (T)n Simple_repeat Simple_repeat 1 34 0 1 747 21 0 0 0 chrX 21252248 21252269 -1170558 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 30 45 0 0 chrX 21259048 21259092 -1163735 + AT_rich Low_complexity Low_complexity 1 44 0 1 747 1099 62 0 7 chrX 21259092 21259237 -1163590 + DNAREP1_DM LINE Penelope 2 145 -449 1 747 732 81 191 53 chrX 21259236 21259367 -1163460 + DNAREP1_DM LINE Penelope 446 594 0 1 747 37 0 0 0 chrX 21259875 21259912 -1162915 + AT_rich Low_complexity Low_complexity 1 37 0 1 747 216 0 0 0 chrX 21262360 21262384 -1160443 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 747 22 0 0 0 chrX 21263097 21263119 -1159708 + AT_rich Low_complexity Low_complexity 1 22 0 1 747 211 176 0 0 chrX 21263839 21263873 -1158954 + (TCCGG)n Simple_repeat Simple_repeat 2 35 0 1 747 258 210 12 36 chrX 21266024 21266108 -1156719 + (CCCA)n Simple_repeat Simple_repeat 2 83 0 1 747 798 134 0 15 chrX 21266659 21266795 -1156032 + DNAREP1_DM LINE Penelope 125 258 -336 1 747 271 26 0 73 chrX 21266803 21266844 -1155983 + DNAREP1_DM LINE Penelope 460 497 -97 1 747 213 121 0 0 chrX 21266864 21266897 -1155930 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1 747 211 279 0 0 chrX 21268032 21268136 -1154691 + CT-rich Low_complexity Low_complexity 1 104 0 1 747 27 81 0 0 chrX 21269920 21269982 -1152845 + AT_rich Low_complexity Low_complexity 1 62 0 1 747 207 69 0 0 chrX 21270835 21270864 -1151963 + (TCCG)n Simple_repeat Simple_repeat 4 32 0 1 747 23 0 0 0 chrX 21272390 21272413 -1150414 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 207 0 0 0 chrX 21272540 21272563 -1150264 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 747 234 62 0 0 chrX 21276344 21276376 -1146451 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 747 246 143 0 0 chrX 21278587 21278636 -1144191 + (A)n Simple_repeat Simple_repeat 1 49 0 1 747 183 42 0 0 chrX 21279166 21279190 -1143637 + (A)n Simple_repeat Simple_repeat 1 24 0 1 747 26 0 0 0 chrX 21280076 21280102 -1142725 + AT_rich Low_complexity Low_complexity 1 26 0 1 747 27 29 0 0 chrX 21281640 21281674 -1141153 + AT_rich Low_complexity Low_complexity 1 34 0 1 747 214 204 0 20 chrX 21282597 21282647 -1140180 + (CATA)n Simple_repeat Simple_repeat 3 51 0 1 747 31 58 0 0 chrX 21284098 21284150 -1138677 + AT_rich Low_complexity Low_complexity 1 52 0 1 747 361 0 0 0 chrX 21284177 21284216 -1138611 - DNAREP1_DM LINE Penelope -554 40 2 1 747 27 0 0 0 chrX 21284577 21284604 -1138223 + AT_rich Low_complexity Low_complexity 1 27 0 1 747 207 316 0 0 chrX 21284658 21284737 -1138090 + (TTG)n Simple_repeat Simple_repeat 3 81 0 1 747 270 176 0 0 chrX 21284785 21284836 -1137991 + (CAT)n Simple_repeat Simple_repeat 1 51 0 1 747 333 118 0 0 chrX 21284871 21284922 -1137905 + (CATA)n Simple_repeat Simple_repeat 1 51 0 1 747 201 74 0 0 chrX 21285004 21285031 -1137796 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 747 233 118 0 19 chrX 21285107 21285159 -1137668 + (TAAAAA)n Simple_repeat Simple_repeat 2 52 0 1 747 23 33 0 0 chrX 21285263 21285293 -1137534 + AT_rich Low_complexity Low_complexity 1 30 0 1 747 213 121 0 0 chrX 21285444 21285477 -1137350 + (TATATG)n Simple_repeat Simple_repeat 6 38 0 1 747 216 330 20 10 chrX 21286722 21286820 -1136007 + (CATATA)n Simple_repeat Simple_repeat 5 103 0 1 747 240 59 0 0 chrX 21287461 21287495 -1135332 + (AGGTG)n Simple_repeat Simple_repeat 4 37 0 1 747 228 67 0 0 chrX 21288268 21288298 -1134529 + (CAA)n Simple_repeat Simple_repeat 3 32 0 1 747 25 31 0 0 chrX 21288556 21288588 -1134239 + AT_rich Low_complexity Low_complexity 1 32 0 1 747 21 0 0 0 chrX 21288884 21288905 -1133922 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 220 195 0 0 chrX 21289320 21289361 -1133466 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 747 263 170 0 0 chrX 21289549 21289596 -1133231 + CT-rich Low_complexity Low_complexity 1 47 0 1 747 1763 129 213 10 chrX 21292390 21292884 -1129943 - DNAREP1_DM LINE Penelope 0 594 1 1 747 189 221 0 0 chrX 21293150 21293218 -1129609 + T-rich Low_complexity Low_complexity 1 68 0 1 747 216 0 0 0 chrX 21294317 21294341 -1128486 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 747 198 103 0 0 chrX 21296035 21296064 -1126763 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 1 747 194 0 39 0 chrX 21298167 21298193 -1124634 + (CAG)n Simple_repeat Simple_repeat 3 29 0 1 747 230 357 0 0 chrX 21300073 21300213 -1122614 + (CCG)n Simple_repeat Simple_repeat 2 141 0 1 747 351 191 0 0 chrX 21300891 21300954 -1121873 - DNAREP1_DM LINE Penelope 0 594 532 1 747 263 122 0 0 chrX 21300944 21300985 -1121842 - DNAREP1_DM LINE Penelope -542 52 12 1 747 23 54 0 0 chrX 21301186 21301223 -1121604 + AT_rich Low_complexity Low_complexity 1 37 0 1 747 30 27 0 0 chrX 21301628 21301665 -1121162 + AT_rich Low_complexity Low_complexity 1 37 0 1 747 225 0 0 0 chrX 21303292 21303317 -1119510 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 747 195 139 0 0 chrX 21304121 21304157 -1118670 + (ACTCG)n Simple_repeat Simple_repeat 5 40 0 1 747 243 0 0 0 chrX 21304235 21304262 -1118565 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 747 254 125 21 0 chrX 21304417 21304465 -1118362 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 747 1212 92 231 20 chrX 21305248 21305499 -1117328 + DNAREP1_DM LINE Penelope 270 573 -21 1 747 27 0 0 0 chrX 21306021 21306048 -1116779 + AT_rich Low_complexity Low_complexity 1 27 0 1 747 203 179 0 0 chrX 21306821 21306860 -1115967 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 747 216 191 0 0 chrX 21309960 21310002 -1112825 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 747 23 0 0 0 chrX 21310095 21310118 -1112709 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 21 36 0 0 chrX 21311773 21311801 -1111026 + AT_rich Low_complexity Low_complexity 1 28 0 1 747 181 120 39 20 chrX 21312097 21312148 -1110679 + (ATTCG)n Simple_repeat Simple_repeat 3 54 0 1 747 258 180 0 0 chrX 21312512 21312573 -1110254 + (CGAAA)n Simple_repeat Simple_repeat 5 65 0 1 747 203 283 17 0 chrX 21319511 21319571 -1103256 + A-rich Low_complexity Low_complexity 5 65 0 1 747 513 0 0 0 chrX 21320310 21320367 -1102460 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 747 203 162 0 0 chrX 21320590 21320627 -1102200 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 1 747 214 174 0 0 chrX 21321298 21321344 -1101483 + (CAG)n Simple_repeat Simple_repeat 1 46 0 1 747 238 235 29 0 chrX 21321549 21321617 -1101210 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 747 1352 96 3 34 chrX 21323171 21323452 -1099375 - DNAREP1_DM LINE Penelope -7 587 254 1 747 569 102 78 39 chrX 21323527 21323629 -1099198 - DNAREP1_DM LINE Penelope -488 106 1 1 747 22 0 0 0 chrX 21324613 21324635 -1098192 + AT_rich Low_complexity Low_complexity 1 22 0 1 747 198 71 0 0 chrX 21325105 21325133 -1097694 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1 747 27 62 0 0 chrX 21326109 21326157 -1096670 + AT_rich Low_complexity Low_complexity 1 48 0 1 747 22 35 0 0 chrX 21327074 21327103 -1095724 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 23 0 0 0 chrX 21327840 21327863 -1094964 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 38139 10 6 0 chrX 21329781 21335151 -1087676 - IVK_DM LINE I 0 5402 1 1 747 216 0 0 0 chrX 21335635 21335659 -1087168 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 1 747 267 103 0 0 chrX 21337247 21337286 -1085541 - DNAREP1_DM LINE Penelope -103 491 453 1 747 26 50 0 0 chrX 21337306 21337346 -1085481 + AT_rich Low_complexity Low_complexity 1 40 0 1 747 21 0 0 0 chrX 21337528 21337549 -1085278 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 228 167 0 0 chrX 21339208 21339256 -1083571 + (AACTG)n Simple_repeat Simple_repeat 1 48 0 1 747 29 70 0 0 chrX 21339594 21339651 -1083176 + AT_rich Low_complexity Low_complexity 1 57 0 1 747 906 149 143 0 chrX 21339751 21339919 -1082908 - DNAREP1_DM LINE Penelope -5 589 398 1 747 681 89 11 0 chrX 21339904 21339994 -1082833 - DNAREP1_DM LINE Penelope -503 91 1 1 747 24 0 0 0 chrX 21341128 21341152 -1081675 + AT_rich Low_complexity Low_complexity 1 24 0 1 747 207 209 23 0 chrX 21341437 21341480 -1081347 + (ATG)n Simple_repeat Simple_repeat 3 46 0 1 747 669 172 0 0 chrX 21342412 21343021 -1079806 + (CATATA)n Simple_repeat Simple_repeat 1 609 0 1 747 648 163 0 0 chrX 21343060 21343281 -1079546 + (CATATA)n Simple_repeat Simple_repeat 1 221 0 1 747 23 0 0 0 chrX 21345159 21345182 -1077645 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 2594 45 0 0 chrX 21345483 21345794 -1077033 + DM1731_LTR LTR Copia 26 336 0 1 747 336 83 0 0 chrX 21346665 21346713 -1076114 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 747 33 25 0 0 chrX 21348132 21348172 -1074655 + AT_rich Low_complexity Low_complexity 1 40 0 1 747 243 288 0 0 chrX 21350790 21350870 -1071957 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 747 183 80 0 0 chrX 21351068 21351093 -1071734 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 747 33 66 0 0 chrX 21351350 21351411 -1071416 + AT_rich Low_complexity Low_complexity 1 61 0 1 747 253 340 0 0 chrX 21351974 21352080 -1070747 - ROO_I LTR Pao -7514 742 637 1 747 205 171 0 0 chrX 21352178 21352219 -1070608 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 747 24 0 0 0 chrX 21352761 21352785 -1070042 + AT_rich Low_complexity Low_complexity 1 24 0 1 747 1136 107 24 131 chrX 21352930 21353182 -1069645 + DNAREP1_DM LINE Penelope 1 353 -241 1 747 458 104 0 0 chrX 21353175 21353242 -1069585 + DNAREP1_DM LINE Penelope 528 594 0 1 747 230 193 35 0 chrX 21354384 21354441 -1068386 + (CTGTG)n Simple_repeat Simple_repeat 1 59 0 1 747 204 40 0 0 chrX 21355233 21355258 -1067569 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 747 203 220 16 48 chrX 21356392 21356454 -1066373 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 1 747 710 58 11 0 chrX 21358002 21358089 -1064738 + DNAREP1_DM LINE Penelope 2 89 -505 1 747 229 147 0 0 chrX 21358117 21358151 -1064676 + DNAREP1_DM LINE Penelope 502 535 -59 1 747 180 217 0 0 chrX 21358608 21358654 -1064173 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 747 216 286 0 0 chrX 21358747 21358796 -1064031 + T-rich Low_complexity Low_complexity 1 49 0 1 747 206 121 0 0 chrX 21360754 21360787 -1062040 + (T)n Simple_repeat Simple_repeat 1 33 0 1 747 234 0 0 0 chrX 21360989 21361015 -1061812 + (T)n Simple_repeat Simple_repeat 1 26 0 1 747 30 0 0 0 chrX 21361348 21361378 -1061449 + AT_rich Low_complexity Low_complexity 1 30 0 1 747 232 253 27 0 chrX 21362853 21362928 -1059899 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 747 198 0 0 0 chrX 21364216 21364238 -1058589 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 748 486 159 222 98 chrX 21366749 21366902 -1055925 - DNAREP1_DM LINE Penelope -21 573 402 1 748 22 0 0 0 chrX 21367166 21367188 -1055639 + AT_rich Low_complexity Low_complexity 1 22 0 1 748 22 0 0 0 chrX 21369240 21369262 -1053565 + AT_rich Low_complexity Low_complexity 1 22 0 1 748 208 147 0 0 chrX 21373994 21374028 -1048799 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 748 249 365 0 10 chrX 21374822 21374919 -1047908 + G-rich Low_complexity Low_complexity 2 97 0 1 748 666 62 0 0 chrX 21375341 21375437 -1047390 + (GCTTG)n Simple_repeat Simple_repeat 3 98 0 1 748 25 31 0 0 chrX 21375890 21375922 -1046905 + AT_rich Low_complexity Low_complexity 1 32 0 1 748 220 200 0 0 chrX 21376144 21376184 -1046643 + (TATG)n Simple_repeat Simple_repeat 2 41 0 1 748 29 28 0 0 chrX 21376707 21376743 -1046084 + AT_rich Low_complexity Low_complexity 1 36 0 1 748 29 0 0 0 chrX 21376767 21376796 -1046031 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 3106 96 53 20 chrX 21376917 21377408 -1045419 - DNAREP1_DM LINE Penelope 0 594 88 1 748 1012 139 0 6 chrX 21377415 21377581 -1045246 - DNAREP1_DM LINE Penelope -429 165 1 1 748 26 0 0 0 chrX 21380213 21380239 -1042588 + AT_rich Low_complexity Low_complexity 1 26 0 1 748 23 0 0 0 chrX 21380848 21380871 -1041956 + AT_rich Low_complexity Low_complexity 1 23 0 1 748 23 0 0 0 chrX 21384088 21384111 -1038716 + AT_rich Low_complexity Low_complexity 1 23 0 1 748 255 61 0 0 chrX 21384404 21384437 -1038390 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 748 192 40 0 0 chrX 21384658 21384683 -1038144 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 748 21 0 0 0 chrX 21384776 21384797 -1038030 + AT_rich Low_complexity Low_complexity 1 21 0 1 748 23 0 0 0 chrX 21384985 21385008 -1037819 + AT_rich Low_complexity Low_complexity 1 23 0 1 748 210 37 0 0 chrX 21385090 21385117 -1037710 + (GTTTG)n Simple_repeat Simple_repeat 5 31 0 1 748 1350 47 246 0 chrX 21392905 21393214 -1029613 - ROOA_LTR LTR Pao 0 386 1 1 748 2262 40 30 3 chrX 21393233 21393530 -1029297 - ROOA_I LTR Pao -6 6843 6539 1 748 5117 50 25 4 chrX 21393515 21394203 -1028624 - ROOA_I LTR Pao -1590 5259 4558 1 748 2332 97 136 1 chrX 21394233 21394776 -1028051 - MDG1_I LTR Gypsy -2121 4475 3673 1 748 1948 77 17 10 chrX 21394785 21395075 -1027752 - ROO_LTR LTR Pao 0 428 137 1 748 5157 34 0 5 chrX 21395075 21395730 -1027097 - ROO_I LTR Pao -389 7867 7216 1 748 5533 33 0 6 chrX 21395729 21396435 -1026392 - ROO_I LTR Pao -1976 6280 5579 1 748 10284 37 10 3 chrX 21396435 21397781 -1025046 - ROO_I LTR Pao -2827 5429 4074 1 748 1632 43 33 29 chrX 21397781 21398021 -1024806 - BATUMI_LTR LTR Pao 0 272 32 1 748 3894 20 10 0 chrX 21398043 21398539 -1024288 - ROO_I LTR Pao -4178 4078 3578 1 748 769 0 0 0 chrX 21398538 21398632 -1024195 - ROO_I LTR Pao -5117 3139 3046 1 748 644 110 18 10 chrX 21398648 21398785 -1024042 - Stalker3_LTR LTR Gypsy -8 416 227 1 748 273 318 28 50 chrX 21399356 21399748 -1023079 - FROGGER_I LTR Copia -1847 230 172 1 748 3204 146 30 17 chrX 21401408 21402041 -1020786 - Stalker2_I LTR Gypsy -6520 882 242 1 748 269 0 0 0 chrX 21402246 21402278 -1020549 - Stalker3_LTR LTR Gypsy -340 32 1 1 748 11074 25 0 6 chrX 21402278 21403655 -1019172 - ROO_I LTR Pao -5206 3050 1682 1 748 3020 246 13 36 chrX 21403647 21404659 -1018168 - G_DM LINE Jockey 0 4346 3358 1 748 6689 18 63 0 chrX 21404664 21405532 -1017295 - ROO_I LTR Pao -6551 1705 783 1 748 3300 40 15 18 chrX 21405562 21406294 -1016533 - DM176_I LTR Gypsy -5526 894 1 1 748 2071 27 0 0 chrX 21406294 21406551 -1016276 - DM176_LTR LTR Gypsy 0 507 251 1 748 2186 14 0 78 chrX 21406552 21406859 -1015968 - DM176_LTR LTR Gypsy -224 283 1 1 748 3368 5 7 7 chrX 21406869 21407283 -1015544 - DM297_LTR LTR Gypsy 0 414 1 1 748 1985 8 0 0 chrX 21407283 21407525 -1015302 - DM297_I LTR Gypsy 0 6167 5926 1 748 833 0 0 0 chrX 21407522 21407619 -1015208 - DM297_I LTR Gypsy -4077 2090 1994 1 748 3492 0 0 5 chrX 21407619 21408020 -1014807 - BLOOD_LTR LTR Gypsy 0 399 1 1 748 56592 1 0 0 chrX 21408020 21414633 -1008194 - BLOOD_I LTR Gypsy 0 6613 1 1 748 3492 0 0 5 chrX 21414633 21415034 -1007793 - BLOOD_LTR LTR Gypsy 0 399 1 1 748 2258 18 0 17 chrX 21415034 21415299 -1007528 - DM297_I LTR Gypsy -4170 1997 1738 1 748 3749 2 0 0 chrX 21415299 21415727 -1007100 - ROO_LTR LTR Pao 0 428 1 1 748 10009 2 1 0 chrX 21415727 21416906 -1005921 - ROO_I LTR Pao 0 8256 7077 1 748 38149 1 2 1 chrX 21416892 21421391 -1001436 - ROO_I LTR Pao -3752 4504 1 1 748 3766 0 0 0 chrX 21421391 21421819 -1001008 - ROO_LTR LTR Pao 0 428 1 1 748 14308 7 1 0 chrX 21421819 21423555 -999272 - DM297_I LTR Gypsy -4430 1737 1 1 748 3368 5 7 7 chrX 21423555 21423969 -998858 - DM297_LTR LTR Gypsy 0 414 1 1 748 4805 27 122 26 chrX 21423969 21424687 -998140 - ROO_I LTR Pao -7469 787 1 1 748 247 55 473 0 chrX 21424687 21424742 -998085 - ROO_LTR LTR Pao 0 428 348 1 748 424 55 0 0 chrX 21424738 21424793 -998034 - ROO_LTR LTR Pao -373 55 1 1 748 3416 87 2 13 chrX 21424807 21425343 -997484 - MDG1_I LTR Gypsy -4850 1746 1217 1 748 412 119 91 9 chrX 21425524 21425634 -997193 - MDG1_I LTR Gypsy -5354 1242 1124 1 748 1611 194 76 67 chrX 21425614 21426686 -996141 - MDG1_I LTR Gypsy -5371 1225 113 1 748 306 98 0 0 chrX 21427057 21427108 -995719 + (TTA)n Simple_repeat Simple_repeat 3 53 0 1 748 24 0 0 0 chrX 21427524 21427548 -995279 + AT_rich Low_complexity Low_complexity 1 24 0 1 748 362 197 0 0 chrX 21429229 21429300 -993527 + DNAREP1_DM LINE Penelope 1 71 -523 1 748 23 0 0 0 chrX 21430472 21430495 -992332 + GC_rich Low_complexity Low_complexity 1 23 0 1 748 188 149 21 0 chrX 21433032 21433079 -989748 + (TCTG)n Simple_repeat Simple_repeat 3 50 0 1 748 248 333 0 21 chrX 21433951 21434092 -988735 + (CAG)n Simple_repeat Simple_repeat 1 138 0 1 748 23 33 0 0 chrX 21434220 21434250 -988577 + AT_rich Low_complexity Low_complexity 1 30 0 1 748 49 0 0 0 chrX 21435229 21435278 -987549 + AT_rich Low_complexity Low_complexity 1 49 0 1 748 652 136 51 0 chrX 21436169 21436287 -986540 + DNAREP1_DM LINE Penelope 1 124 -470 1 748 318 176 99 27 chrX 21436308 21436419 -986408 + DNAREP1_DM LINE Penelope 166 284 -310 1 748 25 0 0 0 chrX 21437511 21437536 -985291 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 22 80 0 0 chrX 21438686 21438736 -984091 + AT_rich Low_complexity Low_complexity 1 50 0 1 748 459 0 0 0 chrX 21439012 21439063 -983764 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 748 234 0 0 0 chrX 21439473 21439499 -983328 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 748 191 36 0 35 chrX 21439784 21439813 -983014 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 748 28 29 0 0 chrX 21440381 21440416 -982411 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 37 23 0 0 chrX 21440515 21440559 -982268 + AT_rich Low_complexity Low_complexity 1 44 0 1 748 24 67 0 0 chrX 21440847 21440892 -981935 + AT_rich Low_complexity Low_complexity 1 45 0 1 748 27 0 0 0 chrX 21444950 21444977 -977850 + AT_rich Low_complexity Low_complexity 1 27 0 1 748 240 139 0 0 chrX 21446333 21446376 -976451 + DNAREP1_DM LINE Penelope 525 567 -27 1 748 216 0 0 0 chrX 21446860 21446884 -975943 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 748 23 0 0 0 chrX 21448008 21448031 -974796 + AT_rich Low_complexity Low_complexity 1 23 0 1 748 22 0 0 0 chrX 21448915 21448937 -973890 + AT_rich Low_complexity Low_complexity 1 22 0 1 748 202 234 0 21 chrX 21449109 21449157 -973670 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 748 192 125 0 0 chrX 21449319 21449351 -973476 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 748 183 42 0 0 chrX 21451189 21451213 -971614 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 748 250 127 0 179 chrX 21451798 21451865 -970962 + DNAREP1_DM LINE Penelope 418 472 -122 1 748 224 100 25 0 chrX 21453006 21453046 -969781 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 748 286 167 133 0 chrX 21456171 21456231 -966596 - DNAREP1_DM LINE Penelope -96 498 431 1 748 677 79 611 0 chrX 21456323 21456449 -966378 + Mariner2_DM DNA Tc1 37 239 -673 1 748 2922 79 59 7 chrX 21456479 21456885 -965942 + Mariner2_DM DNA Tc1 486 912 0 1 748 238 224 0 0 chrX 21457409 21457458 -965369 + MDG1_I LTR Gypsy 924 972 -5624 1 748 285 29 0 0 chrX 21457499 21457533 -965294 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 748 1596 108 129 18 chrX 21458391 21458706 -964121 + DNAREP1_DM LINE Penelope 133 451 -143 1 748 24 53 0 0 chrX 21461524 21461562 -961265 + AT_rich Low_complexity Low_complexity 1 38 0 1 748 23 33 0 0 chrX 21461971 21462001 -960826 + AT_rich Low_complexity Low_complexity 1 30 0 1 748 26 30 0 0 chrX 21463711 21463744 -959083 + AT_rich Low_complexity Low_complexity 1 33 0 1 748 204 189 0 36 chrX 21464819 21464874 -957953 + T-rich Low_complexity Low_complexity 1 53 0 1 748 255 114 0 0 chrX 21465258 21465302 -957525 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 748 245 135 0 0 chrX 21466179 21466216 -956611 + DNAREP1_DM LINE Penelope 1 37 -557 1 748 1946 99 10 58 chrX 21466235 21466547 -956280 + DNAREP1_DM LINE Penelope 296 592 -2 1 748 206 116 0 65 chrX 21466613 21466659 -956168 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 1 748 4187 6 0 61 chrX 21466662 21467169 -955658 - MICROPIA_LTR LTR Gypsy 0 476 1 1 748 16049 13 2 7 chrX 21467169 21468990 -953837 - MICROPIA_I LTR Gypsy 0 4476 2665 1 748 2292 41 0 0 chrX 21468973 21469239 -953588 - MICROPIA_I LTR Gypsy -4210 266 1 1 748 3274 15 0 83 chrX 21469239 21469671 -953156 - MICROPIA_LTR LTR Gypsy 0 476 81 1 748 34 0 0 0 chrX 21470164 21470198 -952629 + AT_rich Low_complexity Low_complexity 1 34 0 1 748 247 68 273 0 chrX 21471371 21471415 -951412 - DNAREP1_DM LINE Penelope -248 346 291 1 748 432 0 0 0 chrX 21471495 21471543 -951284 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 748 1539 94 136 15 chrX 21475054 21475407 -947420 + DNAREP1_DM LINE Penelope 1 524 -70 1 748 274 172 43 86 chrX 21476679 21476749 -946078 + DNAREP1_DM LINE Penelope 5 71 -523 1 748 297 0 0 0 chrX 21477736 21477769 -945058 + (CTA)n Simple_repeat Simple_repeat 2 34 0 1 748 354 129 0 0 chrX 21481635 21481697 -941130 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 748 26 0 0 0 chrX 21482963 21482989 -939838 + AT_rich Low_complexity Low_complexity 1 26 0 1 748 270 0 0 0 chrX 21483831 21483861 -938966 + (CTA)n Simple_repeat Simple_repeat 2 31 0 1 748 354 129 0 0 chrX 21487727 21487789 -935038 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 748 26 0 0 0 chrX 21489055 21489081 -933746 + AT_rich Low_complexity Low_complexity 1 26 0 1 748 270 0 0 0 chrX 21489923 21489953 -932874 + (CTA)n Simple_repeat Simple_repeat 2 31 0 1 748 327 85 0 0 chrX 21493818 21493865 -928962 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 748 5939 33 79 12 chrX 21494892 21495635 -927192 - G5A_DM LINE Jockey -83 2758 1966 1 749 226 100 37 74 chrX 21497954 21498008 -924819 - FB4_DM DNA Tc1 -1310 2779 2728 1 749 4105 100 99 34 chrX 21497975 21498660 -924167 + FB4_DM DNA Tc1 1106 1835 -2254 1 749 2984 114 144 5 chrX 21498658 21499276 -923551 + FB4_DM DNA Tc1 2013 2716 -1373 1 749 412 175 51 87 chrX 21501819 21501957 -920870 + DNAREP1_DM LINE Penelope 40 172 -422 1 749 469 76 0 0 chrX 21503687 21503753 -919074 - DNAREP1_DM LINE Penelope -36 558 493 1 749 30 45 0 0 chrX 21503773 21503817 -919010 + AT_rich Low_complexity Low_complexity 1 44 0 1 749 237 216 44 97 chrX 21504050 21504163 -918664 - QUASIMODO_I LTR Gypsy 0 6060 5954 1 749 701 262 22 15 chrX 21504700 21505018 -917809 - IDEFIX_I LTR Gypsy -719 5244 4648 1 749 525 107 11 35 chrX 21505060 21505147 -917680 + DMCR1A LINE CR1 2 86 -4384 1 749 29 0 0 0 chrX 21505147 21505176 -917651 + AT_rich Low_complexity Low_complexity 1 29 0 1 749 1395 87 49 22 chrX 21505239 21505463 -917364 + DMCR1A LINE CR1 239 468 -4002 1 749 1313 288 122 48 chrX 21505514 21506997 -915830 - IDEFIX_I LTR Gypsy -1867 3761 2169 1 749 528 70 0 27 chrX 21506978 21507052 -915775 - DNAREP1_DM LINE Penelope -522 72 1 1 749 1422 78 23 0 chrX 21507348 21507566 -915261 - Jockey2 LINE Jockey 0 3428 3206 1 749 468 266 19 13 chrX 21507565 21507769 -915058 - IDEFIX_I LTR Gypsy -3999 1629 1503 1 749 2606 93 77 3 chrX 21508167 21508532 -914295 - GTWIN_I LTR Gypsy -3201 3220 2829 1 749 1419 120 0 14 chrX 21508522 21508742 -914085 - GTWIN_I LTR Gypsy -3760 2661 2445 1 749 969 84 77 0 chrX 21508742 21508885 -913942 - DNAREP1_DM LINE Penelope -440 154 1 1 749 21 57 0 0 chrX 21510177 21510212 -912615 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 1021 102 110 15 chrX 21510762 21511014 -911813 - DNAREP1_DM LINE Penelope -67 527 214 1 749 3739 5 0 2 chrX 21511045 21511470 -911357 - Stalker2_LTR LTR Gypsy 0 424 1 1 749 5272 13 6 18 chrX 21511470 21512180 -910647 - Stalker2_I LTR Gypsy 0 7402 6702 1 749 60131 3 1 14 chrX 21512180 21519806 -903021 - DM412 LTR Gypsy 0 6897 1 1 749 40009 1 3 0 chrX 21519810 21524347 -898480 - Stalker2_I LTR Gypsy -1279 6123 1574 1 749 13684 5 2 4 chrX 21524546 21526141 -896686 - Stalker2_I LTR Gypsy -5810 1592 1 1 749 3739 5 0 2 chrX 21526141 21526566 -896261 - Stalker2_LTR LTR Gypsy 0 424 1 1 749 1705 107 43 0 chrX 21526570 21526823 -896004 - HELENA_RT LINE Jockey -141 1176 913 1 749 1159 94 238 7 chrX 21526821 21527094 -895733 - HELENA_RT LINE Jockey -585 732 397 1 749 593 185 52 58 chrX 21527406 21527578 -895249 - Gypsy3_I LTR Gypsy -6006 171 1 1 749 344 246 50 25 chrX 21527578 21527699 -895128 - Gypsy3_LTR LTR Gypsy 0 398 275 1 749 749 78 0 0 chrX 21527805 21527907 -894920 - STALKER4_LTR LTR Gypsy -68 334 233 1 749 2373 177 45 31 chrX 21528231 21528784 -894043 - Stalker2_I LTR Gypsy -6551 851 291 1 749 25 0 0 0 chrX 21528808 21528833 -893994 + AT_rich Low_complexity Low_complexity 1 25 0 1 749 1306 63 17 22 chrX 21528982 21529161 -893666 - STALKER4_LTR LTR Gypsy -23 379 202 1 749 21748 113 52 55 chrX 21529160 21530191 -892636 - Gypsy2_I LTR Gypsy -1358 4777 3795 1 749 180 0 0 0 chrX 21530191 21530211 -892616 + (GGAAA)n Simple_repeat Simple_repeat 4 23 0 1 749 21748 113 52 55 chrX 21530211 21533241 -889586 - Gypsy2_I LTR Gypsy -2341 3794 727 1 749 228 27 0 0 chrX 21533232 21533269 -889558 - Gypsy2_I LTR Gypsy -5525 610 574 1 749 42347 2 0 0 chrX 21533282 21537974 -884853 + FW_DM LINE Jockey 1 4692 0 1 749 3857 38 39 14 chrX 21537974 21538488 -884339 - Gypsy2_I LTR Gypsy -5553 582 56 1 749 646 86 312 7 chrX 21538473 21538614 -884213 - Gypsy2_I LTR Gypsy -5951 184 1 1 749 2590 42 0 3 chrX 21538614 21538924 -883903 - Gypsy2_LTR LTR Gypsy 0 353 45 1 749 21 89 0 0 chrX 21539580 21539636 -883191 + AT_rich Low_complexity Low_complexity 1 56 0 1 749 30 45 0 0 chrX 21539808 21539852 -882975 + AT_rich Low_complexity Low_complexity 1 44 0 1 749 400 340 36 47 chrX 21540014 21540699 -882128 - ZAM_I LTR Gypsy -1220 6270 5593 1 749 455 354 3 0 chrX 21540697 21541008 -881819 - Gypsy5_I LTR Gypsy -4058 2451 2140 1 749 10560 150 9 6 chrX 21541057 21543016 -879811 - Gypsy_I LTR Gypsy -374 7148 4992 1 749 2541 153 0 5 chrX 21543012 21543419 -879408 - Gypsy_I LTR Gypsy -2013 4494 4090 1 749 677 66 6 0 chrX 21543414 21543509 -879318 + STALKER4_I LTR Gypsy 4482 4581 -1949 1 749 17536 4 0 5 chrX 21543536 21545509 -877318 + DOC LINE Jockey 32 1995 -2730 1 749 19912 8 1 2 chrX 21545509 21547761 -875066 + DOC LINE Jockey 2474 4722 -3 1 749 16517 14 3 1 chrX 21547757 21549716 -873111 + STALKER4_I LTR Gypsy 4569 6530 0 1 749 676 48 0 0 chrX 21549716 21549799 -873028 + STALKER4_LTR LTR Gypsy 1 83 -319 1 749 14623 13 0 0 chrX 21549794 21551471 -871356 - STALKER4_I LTR Gypsy -1740 4790 3114 1 749 672 19 74 0 chrX 21551489 21551584 -871243 - STALKER4_I LTR Gypsy -4213 2317 2229 1 749 3616 0 0 2 chrX 21551611 21552014 -870813 - STALKER4_LTR LTR Gypsy 0 402 1 1 749 46775 11 0 3 chrX 21552014 21558368 -864459 - STALKER4_I LTR Gypsy 0 6530 76 1 749 2009 12 0 0 chrX 21558380 21558620 -864207 - MDG1_LTR LTR Gypsy 0 442 203 1 749 1544 31 0 0 chrX 21558615 21558808 -864019 - MDG1_I LTR Gypsy -3436 3160 2968 1 749 11427 11 39 3 chrX 21558792 21560281 -862546 + MDG1_I LTR Gypsy 5067 6799 -98 1 749 423 100 0 0 chrX 21560285 21560355 -862472 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 749 2934 20 0 0 chrX 21560355 21560711 -862116 + MDG1_LTR LTR Gypsy 87 442 0 1 749 33516 5 6 2 chrX 21560711 21564707 -858120 - MDG1_I LTR Gypsy -2587 4009 1 1 749 2934 20 0 0 chrX 21564707 21565063 -857764 - MDG1_LTR LTR Gypsy 0 442 87 1 749 423 100 0 0 chrX 21565063 21565133 -857694 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 749 20793 10 0 17 chrX 21565137 21567781 -855046 - MDG1_I LTR Gypsy -98 6799 4010 1 749 423 100 0 0 chrX 21567795 21567865 -854962 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 749 2930 17 0 3 chrX 21567865 21568222 -854605 + MDG1_LTR LTR Gypsy 87 442 0 1 749 33510 5 6 3 chrX 21568222 21572219 -850608 + MDG1_I LTR Gypsy 1 4009 -2587 1 749 2934 20 0 0 chrX 21572219 21572575 -850252 - MDG1_LTR LTR Gypsy 0 442 87 1 749 423 100 0 0 chrX 21572575 21572645 -850182 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 749 20632 12 11 1 chrX 21572659 21575232 -847595 + MDG1_I LTR Gypsy 4010 6799 -98 1 749 401 97 14 0 chrX 21575236 21575308 -847519 + (TAA)n Simple_repeat Simple_repeat 3 75 0 1 749 2930 17 0 3 chrX 21575308 21575665 -847162 + MDG1_LTR LTR Gypsy 87 442 0 1 749 530 0 0 67 chrX 21575665 21575740 -847087 - STALKER4_I LTR Gypsy -6460 70 1 1 749 3465 0 0 2 chrX 21575740 21576143 -846684 - STALKER4_LTR LTR Gypsy 0 402 1 1 749 9064 75 27 15 chrX 21576146 21577943 -844884 - STALKER4_I LTR Gypsy -4305 2225 291 1 749 856 87 16 0 chrX 21578141 21578268 -844559 - STALKER4_LTR LTR Gypsy -23 379 251 1 749 2402 104 57 5 chrX 21578268 21578655 -844172 - Gypsy6_LTR LTR Gypsy 0 407 1 1 749 10704 92 34 8 chrX 21578657 21580413 -842414 - Gypsy3_I LTR Gypsy 0 7012 4501 1 749 3449 2 0 2 chrX 21580440 21580843 -841984 - STALKER4_LTR LTR Gypsy 0 402 1 1 749 12530 5 0 1 chrX 21580843 21582367 -840460 - STALKER4_I LTR Gypsy 0 6530 5008 1 749 14847 155 8 9 chrX 21582369 21586804 -836023 - G6_DM LINE Jockey 0 4346 1 1 749 8758 3 0 0 chrX 21586805 21587822 -835005 - STALKER4_I LTR Gypsy -1512 5018 4002 1 749 1884 39 8 45 chrX 21587939 21588205 -834622 - BLOOD_LTR LTR Gypsy -143 256 1 1 749 52135 13 26 9 chrX 21588205 21594710 -828117 - BLOOD_I LTR Gypsy 0 6613 1 1 749 402 42 0 163 chrX 21594827 21594913 -827914 - BLOOD_LTR LTR Gypsy -143 256 185 1 749 1604 176 14 88 chrX 21594971 21595394 -827433 - Gypsy3_LTR LTR Gypsy -6 392 1 1 749 20494 226 17 21 chrX 21595396 21602110 -820717 - Gypsy6_I LTR Gypsy 0 7012 27 1 749 1604 176 14 88 chrX 21602196 21602619 -820208 - Gypsy3_LTR LTR Gypsy -6 392 1 1 749 1544 36 20 0 chrX 21602619 21602815 -820012 - BLOOD_LTR LTR Gypsy -199 200 1 1 749 2161 119 41 25 chrX 21602815 21603736 -819091 - Stalker2_I LTR Gypsy -5189 1341 291 1 749 813 75 25 0 chrX 21603934 21604054 -818773 - STALKER4_LTR LTR Gypsy -23 379 257 1 749 2363 72 32 20 chrX 21604054 21604470 -818357 - Gypsy6A_LTR LTR Gypsy 0 420 1 1 749 31960 71 27 20 chrX 21604472 21610607 -812220 - Gypsy6_I LTR Gypsy 0 7012 168 1 749 22 0 0 0 chrX 21610611 21610633 -812194 + AT_rich Low_complexity Low_complexity 1 22 0 1 749 563 51 0 25 chrX 21610679 21610760 -812067 - Gypsy6_I LTR Gypsy -6837 175 97 1 749 1714 108 16 60 chrX 21610816 21611132 -811695 - Gypsy6A_LTR LTR Gypsy -118 302 1 1 749 1455 296 10 10 chrX 21611135 21611640 -811187 - Gypsy6_I LTR Gypsy -1 7011 6507 1 749 7082 8 0 0 chrX 21611651 21612481 -810346 - FW_DM LINE Jockey -161 4531 3702 1 749 1612 35 12 87 chrX 21612477 21612731 -810096 - Gypsy6_I LTR Gypsy -6460 552 318 1 749 19177 8 0 3 chrX 21612789 21615068 -807759 - FW_DM LINE Jockey -923 3769 1498 1 749 5850 14 18 1 chrX 21615064 21615833 -806994 + STALKER4_I LTR Gypsy 5749 6530 0 1 749 646 48 0 0 chrX 21615833 21615916 -806911 + STALKER4_LTR LTR Gypsy 1 83 -319 1 749 13762 22 0 0 chrX 21615911 21617588 -805239 - STALKER4_I LTR Gypsy -1740 4790 3114 1 749 9850 76 20 14 chrX 21617614 21619513 -803314 - STALKER4_I LTR Gypsy -4213 2317 291 1 749 25 0 0 0 chrX 21619537 21619562 -803265 + AT_rich Low_complexity Low_complexity 1 25 0 1 749 901 71 16 0 chrX 21619711 21619838 -802989 - STALKER4_LTR LTR Gypsy -23 379 251 1 749 2399 101 57 5 chrX 21619838 21620225 -802602 - Gypsy6_LTR LTR Gypsy 0 407 1 1 749 14768 91 30 43 chrX 21620227 21622970 -799857 - Gypsy3_I LTR Gypsy 0 7012 3681 1 749 956 146 33 102 chrX 21623195 21623439 -799388 - DMLTR5 LTR Gypsy 0 266 40 1 749 793 135 0 0 chrX 21623527 21623653 -799174 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 1 749 295 109 0 0 chrX 21623752 21623798 -799029 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 1 749 1630 209 40 119 chrX 21624061 21624668 -798159 - HMSBEAGLE_I LTR Gypsy -161 6368 5810 1 93 28599 139 1 8 chrX 21625047 21629684 -793143 - HMSBEAGLE_I LTR Gypsy -711 5818 1212 1 750 34 42 0 0 chrX 21629847 21629895 -792932 + AT_rich Low_complexity Low_complexity 1 48 0 1 750 2048 90 42 31 chrX 21629910 21630265 -792562 - HMSBEAGLE_I LTR Gypsy -6170 359 1 1 750 956 146 33 102 chrX 21630264 21630508 -792319 - DMLTR5 LTR Gypsy 0 266 40 1 750 7569 30 0 4 chrX 21630818 21631752 -791075 - Gypsy3_I LTR Gypsy -2495 3682 2753 1 750 270 311 105 37 chrX 21631751 21632419 -790408 - BLOOD_I LTR Gypsy -4445 2168 1456 1 750 3275 140 30 17 chrX 21632934 21633567 -789260 - Stalker2_I LTR Gypsy -6520 882 242 1 750 289 96 0 37 chrX 21633773 21633827 -789000 - Stalker2_I LTR Gypsy -7350 52 1 1 750 267 51 26 0 chrX 21633827 21633853 -788974 - STALKER4_I LTR Gypsy -6503 27 1 1 750 1911 117 6 66 chrX 21633867 21634270 -788557 - Stalker2_LTR LTR Gypsy -27 397 3 1 750 394 198 0 40 chrX 21634275 21634375 -788452 - Gypsy_LTR LTR Gypsy -37 445 350 1 750 820 159 7 7 chrX 21634373 21634519 -788308 - Gypsy_LTR LTR Gypsy -312 170 25 1 750 320 228 19 19 chrX 21634726 21634829 -787998 - TIRANT_I LTR Gypsy -1227 6465 6398 1 750 2409 27 0 0 chrX 21635072 21635364 -787463 - Invader4_LTR LTR Gypsy -54 292 1 1 750 255 191 67 67 chrX 21635364 21635451 -787376 - TABOR_LTR LTR Gypsy -419 87 1 1 750 358 91 0 0 chrX 21635451 21635497 -787330 - DM412 LTR Gypsy -110 6787 6742 1 750 210 37 0 0 chrX 21635576 21635603 -787224 + (TTA)n Simple_repeat Simple_repeat 3 29 0 1 750 319 162 0 0 chrX 21635646 21635698 -787129 - BLOOD_I LTR Gypsy -721 5892 5852 1 750 547 187 85 97 chrX 21635698 21636095 -786732 - Gypsy6_LTR LTR Gypsy 0 398 6 1 750 10993 184 45 39 chrX 21636107 21638897 -783930 - Gypsy3_I LTR Gypsy -583 6429 3870 1 750 6567 138 50 2 chrX 21638895 21640001 -782826 - Gypsy_I LTR Gypsy -1754 4753 3595 1 750 575 135 48 0 chrX 21639999 21640103 -782724 - Gypsy_I LTR Gypsy -3229 3278 3170 1 750 5016 85 61 4 chrX 21640100 21640855 -781972 - Gypsy_I LTR Gypsy -4102 2405 1608 1 750 4620 87 73 10 chrX 21640853 21641550 -781277 - Gypsy_I LTR Gypsy -5055 1452 712 1 750 1183 88 0 0 chrX 21641928 21642099 -780728 - Gypsy_I LTR Gypsy -5784 723 553 1 750 496 74 0 58 chrX 21642097 21642183 -780644 - BS LINE Jockey -6 5120 5040 1 750 589 249 25 65 chrX 21642190 21642435 -780392 - HELENA LINE Jockey 0 661 427 1 750 8090 38 1 1 chrX 21642450 21643491 -779336 - STALKER4_I LTR Gypsy -683 5847 4807 1 750 255 143 73 73 chrX 21644494 21644562 -778265 - Gypsy4_I LTR Gypsy -1897 4391 4324 1 750 566 313 66 33 chrX 21644585 21644703 -778124 - Gypsy6_I LTR Gypsy -3774 3238 3023 1 750 1394 30 64 0 chrX 21644703 21644906 -777921 - TLD2 Unknown Unknown -2 216 1 1 750 566 313 66 33 chrX 21644906 21645298 -777529 - Gypsy6_I LTR Gypsy -3774 3022 2296 1 750 394 318 25 33 chrX 21646682 21647038 -775789 - Gypsy6_I LTR Gypsy -4868 992 856 1 750 5020 50 84 15 chrX 21647038 21648199 -774628 - PROTOP DNA P 0 1105 1 1 750 21 36 0 0 chrX 21648602 21648630 -774197 + AT_rich Low_complexity Low_complexity 1 28 0 1 750 54 0 0 0 chrX 21649251 21649305 -773522 + AT_rich Low_complexity Low_complexity 1 54 0 1 750 332 365 6 0 chrX 21649609 21649790 -773037 - NOMAD_I LTR Gypsy -259 6313 6132 1 750 2638 110 36 32 chrX 21649837 21650307 -772520 - ZAM_LTR LTR Gypsy 0 472 1 1 750 4057 35 6 0 chrX 21650312 21650682 -772145 - ZAM_I LTR Gypsy 0 7490 7120 1 750 211 0 57 29 chrX 21650682 21650717 -772110 + (CTTTA)n Simple_repeat Simple_repeat 2 37 0 1 750 4057 35 6 0 chrX 21650717 21650865 -771962 - ZAM_I LTR Gypsy -371 7119 6970 1 750 20301 36 3 2 chrX 21650863 21651722 -771105 - ZAM_I LTR Gypsy -3187 4303 3446 1 750 207 0 0 0 chrX 21651722 21651745 -771082 + (TAG)n Simple_repeat Simple_repeat 1 23 0 1 750 20301 43 40 6 chrX 21651745 21654297 -768530 - ZAM_I LTR Gypsy -4045 3445 802 1 750 2091 49 7 37 chrX 21654297 21654593 -768234 - Gypsy4_LTR LTR Gypsy 0 287 1 1 750 2195 105 78 38 chrX 21654624 21655021 -767806 - ZAM_LTR LTR Gypsy -59 413 1 1 750 3490 312 39 21 chrX 21655022 21656959 -765868 - Gypsy4_I LTR Gypsy -528 5760 3790 1 750 312 282 0 34 chrX 21657190 21657278 -765549 - HMSBEAGLE_I LTR Gypsy -494 6035 5951 1 750 456 224 43 50 chrX 21657316 21657457 -765370 - HMSBEAGLE_I LTR Gypsy -580 5949 5810 1 750 2680 123 5 7 chrX 21657677 21658103 -764724 - HMSBEAGLE_I LTR Gypsy -918 5611 5187 1 750 5860 206 20 5 chrX 21658141 21659369 -763458 - HMSBEAGLE_I LTR Gypsy -3139 3390 2144 1 750 3151 127 94 0 chrX 21659363 21660116 -762711 - HMSBEAGLE_I LTR Gypsy -4494 2035 1212 1 750 59 46 0 0 chrX 21660285 21660372 -762455 + AT_rich Low_complexity Low_complexity 1 87 0 1 750 1896 118 36 31 chrX 21660387 21660744 -762083 - HMSBEAGLE_I LTR Gypsy -6170 359 1 1 750 492 211 98 7 chrX 21660794 21660937 -761890 - DMLTR5 LTR Gypsy -71 195 40 1 750 943 99 7 0 chrX 21661025 21661177 -761650 - STALKER4_LTR LTR Gypsy -227 175 23 1 750 23 54 0 0 chrX 21661246 21661283 -761544 + AT_rich Low_complexity Low_complexity 1 37 0 1 750 523 317 45 30 chrX 21661710 21662107 -760720 - NOMAD_I LTR Gypsy -10 6562 6160 1 750 2040 29 105 7 chrX 21662760 21663036 -759791 + G4_DM LINE Jockey 3103 3405 -451 1 750 484 108 0 0 chrX 21663034 21663117 -759710 + G4_DM LINE Jockey 3739 3821 -35 1 750 285 297 8 8 chrX 21663259 21663378 -759449 - NOMAD_I LTR Gypsy -4074 2498 2380 1 750 1470 35 109 0 chrX 21663477 21663797 -759030 - Gypsy11_LTR LTR Gypsy -11 441 87 1 750 27 29 0 0 chrX 21663841 21663875 -758952 + AT_rich Low_complexity Low_complexity 1 34 0 1 750 302 91 18 0 chrX 21663875 21663930 -758897 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 750 1826 78 89 53 chrX 21663930 21664268 -758559 - IDEFIX_LTR LTR Gypsy -1 593 244 1 750 1434 79 0 18 chrX 21664323 21664543 -758284 - IDEFIX_I LTR Gypsy 0 5628 5413 1 750 411 235 53 83 chrX 21664582 21664847 -757980 - Gypsy3_LTR LTR Gypsy -30 368 112 1 750 26 50 0 0 chrX 21665025 21665065 -757762 + AT_rich Low_complexity Low_complexity 1 40 0 1 750 796 339 49 55 chrX 21665143 21666030 -756797 - Gypsy_I LTR Gypsy 0 6421 5627 1 750 2173 136 34 25 chrX 21666097 21666534 -756293 - GTWIN_LTR LTR Gypsy -54 441 1 1 750 199 93 0 44 chrX 21666926 21666971 -755856 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 1 750 249 197 0 0 chrX 21667283 21667349 -755478 + T-rich Low_complexity Low_complexity 1 66 0 1 750 768 112 0 0 chrX 21668186 21668311 -754516 - IDEFIX_I LTR Gypsy -1846 3782 3658 1 750 2233 136 10 25 chrX 21668470 21668878 -753949 - GTWIN_LTR LTR Gypsy -93 402 1 1 750 5520 52 3 4 chrX 21668878 21669634 -753193 - IDEFIX_I LTR Gypsy -1969 3659 2905 1 750 4292 56 0 5 chrX 21669631 21670202 -752625 - IDEFIX_I LTR Gypsy -4104 1524 957 1 750 3152 18 0 57 chrX 21670202 21670624 -752203 - Gypsy3_LTR LTR Gypsy 0 398 1 1 750 6407 82 4 8 chrX 21670624 21671586 -751241 - IDEFIX_I LTR Gypsy -4670 958 1 1 750 25 0 0 0 chrX 21671856 21671881 -750946 + AT_rich Low_complexity Low_complexity 1 25 0 1 750 1625 80 114 57 chrX 21672075 21672407 -750420 - IDEFIX_LTR LTR Gypsy 0 594 244 1 750 385 74 0 0 chrX 21672554 21672608 -750219 - IDEFIX_LTR LTR Gypsy -540 54 1 1 750 248 122 0 0 chrX 21672577 21672618 -750209 + BARI1 DNA Tc1 4 44 -1706 1 750 36 0 0 0 chrX 21672618 21672654 -750173 + AT_rich Low_complexity Low_complexity 1 36 0 1 750 2431 256 83 13 chrX 21672654 21673615 -749212 - Gypsy4_I LTR Gypsy -3286 3002 2007 1 750 267 254 0 0 chrX 21673717 21673784 -749043 - Gypsy10_I LTR Gypsy -3208 2070 2004 1 750 372 156 0 13 chrX 21673834 21673908 -748919 - MDG1_LTR LTR Gypsy -26 416 344 1 750 2654 61 8 3 chrX 21673908 21674270 -748557 - Gypsy10_LTR LTR Gypsy 0 364 1 1 750 539 48 0 98 chrX 21674270 21674362 -748465 - Gypsy10_I LTR Gypsy 0 5278 5196 1 750 16673 184 16 22 chrX 21674540 21680824 -742003 - Gypsy10_I LTR Gypsy -291 5997 1 1 750 1349 85 15 5 chrX 21680824 21681024 -741803 - Gypsy10_LTR LTR Gypsy 0 364 163 1 750 6499 289 30 6 chrX 21681467 21683924 -738903 - TIRANT_I LTR Gypsy 0 7692 5177 1 750 1895 253 8 8 chrX 21683924 21684449 -738378 - ZAM_I LTR Gypsy -3477 4013 3489 1 750 3470 28 0 0 chrX 21684549 21684981 -737846 + G2_DM LINE Jockey 2671 3102 0 1 750 294 298 12 12 chrX 21685090 21685250 -737577 + BLASTOPIA_I LTR Gypsy 986 1145 -3336 1 750 487 328 24 24 chrX 21686133 21686430 -736397 + BLASTOPIA_I LTR Gypsy 2030 2326 -2155 1 750 2590 3 0 0 chrX 21686497 21686795 -736032 + Invader3_LTR LTR Gypsy 1 298 0 1 750 4706 2 0 0 chrX 21686795 21687343 -735484 + Invader3_I LTR Gypsy 1 548 -4340 1 751 21550 19 26 0 chrX 21759343 21761925 -660902 - NINJA_I LTR Pao -1500 4511 1863 1 751 10958 29 113 33 chrX 21761921 21763471 -659356 - NINJA_I LTR Pao -4336 1675 1 1 751 2481 35 0 22 chrX 21763472 21763795 -659032 - NINJA_LTR LTR Pao -1 316 1 1 751 21 0 0 0 chrX 21763820 21763841 -658986 + AT_rich Low_complexity Low_complexity 1 21 0 1 751 27 29 0 0 chrX 21764373 21764407 -658420 + AT_rich Low_complexity Low_complexity 1 34 0 1 751 247 91 0 0 chrX 21764646 21764679 -658148 + Baggins1 LINE LOA 4727 4759 -694 1 751 693 103 241 0 chrX 21764684 21764829 -657998 + FB4_DM DNA Tc1 3908 4087 -2 1 751 3024 60 5 17 chrX 21765569 21765975 -656852 - Baggins1 LINE LOA -262 5191 4791 1 751 2510 27 109 40 chrX 21766249 21766596 -656231 - Baggins1 LINE LOA 0 5453 5083 1 751 27197 22 59 11 chrX 21766599 21771105 -651722 - NINJA_I LTR Pao -1290 4721 1 1 751 2485 35 0 22 chrX 21771106 21771429 -651398 - NINJA_LTR LTR Pao -1 316 1 1 751 21 0 0 0 chrX 21771454 21771475 -651352 + AT_rich Low_complexity Low_complexity 1 21 0 1 751 27 29 0 0 chrX 21772007 21772041 -650786 + AT_rich Low_complexity Low_complexity 1 34 0 1 751 247 91 0 0 chrX 21772280 21772313 -650514 + Baggins1 LINE LOA 4727 4759 -694 1 751 693 103 241 0 chrX 21772318 21772463 -650364 + FB4_DM DNA Tc1 3908 4087 -2 1 751 2891 70 7 17 chrX 21773203 21773608 -649219 - Baggins1 LINE LOA -262 5191 4791 1 751 5635 83 99 7 chrX 21773764 21774982 -647845 - R1_DM LINE R1 -3113 2243 898 1 751 243 88 0 0 chrX 21774982 21775016 -647811 + (CGG)n Simple_repeat Simple_repeat 1 34 0 1 751 5635 111 47 3 chrX 21775016 21775341 -647486 - R1_DM LINE R1 -4459 897 575 1 751 1003 134 6 6 chrX 21775342 21775514 -647313 - R1_DM LINE R1 -5184 172 1 1 751 1979 68 3 35 chrX 21775532 21775821 -647006 + Gypsy6A_LTR LTR Gypsy 71 350 -70 1 751 1448 100 29 0 chrX 21775820 21776061 -646766 - STALKER4_I LTR Gypsy -3666 2864 2617 1 751 5380 154 73 36 chrX 21776063 21777288 -645539 - STALKER4_I LTR Gypsy -4180 2350 975 1 751 557 267 36 20 chrX 21777584 21777779 -645048 - Copia2_I LTR Copia -97 4065 3868 1 751 3101 312 72 46 chrX 21777772 21780279 -642548 - Copia2_I LTR Copia -1401 2761 191 1 751 557 267 36 20 chrX 21780764 21780959 -641868 - Copia2_I LTR Copia -97 4065 3868 1 751 3101 312 72 46 chrX 21780952 21783459 -639368 - Copia2_I LTR Copia -1401 2761 191 1 751 658 152 30 8 chrX 21783933 21784066 -638761 - STALKER4_I LTR Gypsy -5637 893 758 1 751 1268 170 89 72 chrX 21784130 21784491 -638336 - ROVER-LTR_DM LTR Gypsy 0 367 1 1 751 352 223 87 10 chrX 21784726 21784830 -637997 - DNAREP1_DM LINE Penelope -416 178 67 1 751 620 208 70 13 chrX 21784964 21785120 -637707 + HETRP_DM Satellite Satellite 1518 1682 -190 1 751 792 182 26 20 chrX 21785251 21785402 -637425 + HETRP_DM Satellite Satellite 1518 1669 -203 1 751 4746 124 76 91 chrX 21785414 21786443 -636384 - HOBO DNA hAT 0 3016 2004 1 751 9378 93 19 7 chrX 21786532 21787886 -634941 - HOBO DNA hAT -1317 1699 330 1 751 2048 84 60 19 chrX 21787863 21788262 -634565 - PROTOP DNA P -4000 480 1 1 751 1376 118 71 158 chrX 21788262 21788580 -634247 - HOBO DNA hAT -2704 312 23 1 751 28 79 0 0 chrX 21789470 21789533 -633294 + AT_rich Low_complexity Low_complexity 1 63 0 1 751 27 29 0 0 chrX 21790071 21790105 -632722 + AT_rich Low_complexity Low_complexity 1 34 0 1 751 1408 21 161 0 chrX 21790344 21790530 -632297 + Baggins1 LINE LOA 4727 4942 -511 1 751 2013 28 83 0 chrX 21790613 21790867 -631960 + G_DM LINE Jockey 1 275 -4071 1 751 8286 22 64 50 chrX 21790867 21791957 -630870 + PROTOP_A DNA P 1 1105 0 1 751 248 51 0 0 chrX 21791957 21791996 -630831 + G_DM LINE Jockey 269 307 -4039 1 751 2611 130 19 87 chrX 21792002 21792517 -630310 + R1_DM LINE R1 226 705 -4651 1 751 5175 95 1 1 chrX 21792517 21793212 -629615 + R1_DM LINE R1 1099 1793 -3563 1 751 2441 130 0 104 chrX 21793213 21793685 -629142 + R1_DM LINE R1 310 732 -4624 1 751 3226 82 69 48 chrX 21793680 21794205 -628622 + R1_DM LINE R1 512 1047 -4309 1 751 28 79 0 0 chrX 21794766 21794829 -627998 + AT_rich Low_complexity Low_complexity 1 63 0 1 751 27 29 0 0 chrX 21795367 21795401 -627426 + AT_rich Low_complexity Low_complexity 1 34 0 1 751 1408 21 161 0 chrX 21795640 21795826 -627001 + Baggins1 LINE LOA 4727 4942 -511 1 751 2013 28 83 0 chrX 21795909 21796163 -626664 + G_DM LINE Jockey 1 275 -4071 1 751 8286 22 64 50 chrX 21796163 21797253 -625574 + PROTOP_A DNA P 1 1105 0 1 751 248 51 0 0 chrX 21797253 21797292 -625535 + G_DM LINE Jockey 269 307 -4039 1 751 2611 130 19 87 chrX 21797298 21797813 -625014 + R1_DM LINE R1 226 705 -4651 1 751 5175 95 1 1 chrX 21797813 21798508 -624319 + R1_DM LINE R1 1099 1793 -3563 1 751 7427 166 96 51 chrX 21798509 21800354 -622473 + R1_DM LINE R1 310 2237 -3119 1 751 443 65 0 101 chrX 21800412 21800481 -622346 - Gypsy6A_LTR LTR Gypsy -168 252 191 1 751 236 224 65 86 chrX 21800481 21800574 -622253 + TABOR_LTR LTR Gypsy 1 91 -415 1 751 4056 19 14 2 chrX 21800645 21801127 -621700 + G_DM LINE Jockey 1895 2382 -1964 1 751 236 224 65 86 chrX 21801127 21801220 -621607 + TABOR_LTR LTR Gypsy 1 91 -415 1 751 909 26 97 0 chrX 21801502 21801615 -621212 - Gypsy6A_LTR LTR Gypsy -226 194 71 1 751 30070 56 25 19 chrX 21801623 21805752 -617075 + G_DM LINE Jockey 105 4257 -89 1 751 2652 32 0 0 chrX 21805746 21806062 -616765 - G4_DM LINE Jockey -3540 316 1 1 751 1248 263 84 20 chrX 21806256 21806933 -615894 - QUASIMODO_I LTR Gypsy -2132 3928 2755 1 751 561 329 12 16 chrX 21806985 21807232 -615595 - HMSBEAGLE_I LTR Gypsy -4779 1750 1505 1 751 24 0 0 0 chrX 21807569 21807593 -615234 + AT_rich Low_complexity Low_complexity 1 24 0 1 751 28 0 0 0 chrX 21808211 21808239 -614588 + AT_rich Low_complexity Low_complexity 1 28 0 1 751 9363 103 63 5 chrX 21808563 21810387 -612440 - HOBO DNA hAT -647 2369 330 1 751 2077 124 185 15 chrX 21810364 21810758 -612069 - PROTOP DNA P -4003 477 17 1 751 2491 0 0 0 chrX 21810776 21811042 -611785 - Invader2_LTR LTR Gypsy 0 266 1 1 751 7614 14 1 2 chrX 21811042 21812223 -610604 - Invader2_I LTR Gypsy 0 4592 3320 1 751 20466 40 20 4 chrX 21812223 21814833 -607994 - Invader2_I LTR Gypsy -1886 2706 1 1 751 2405 15 0 0 chrX 21814833 21815099 -607728 - Invader2_LTR LTR Gypsy 0 266 1 1 751 543 143 209 23 chrX 21815099 21815190 -607637 - HOBO DNA hAT -2709 307 193 1 751 23 50 0 48 chrX 21816007 21816070 -606757 + AT_rich Low_complexity Low_complexity 1 60 0 1 751 27 29 0 0 chrX 21816590 21816624 -606203 + AT_rich Low_complexity Low_complexity 1 34 0 1 751 521 33 0 0 chrX 21816863 21816923 -605904 + Baggins1 LINE LOA 4727 4786 -667 1 751 2462 4 0 21 chrX 21817012 21817293 -605534 + G_DM LINE Jockey 1 275 -4071 1 751 982 27 147 4 chrX 21817293 21817441 -605386 + PROTOP DNA P 1 164 -4316 1 751 732 308 54 13 chrX 21817787 21818103 -604724 - BLASTOPIA_I LTR Gypsy 0 4481 4153 1 751 2654 17 3 0 chrX 21818923 21819220 -603607 - Invader3_LTR LTR Gypsy 0 298 1 1 751 43549 4 21 0 chrX 21819220 21824007 -598820 - Invader3_I LTR Gypsy 0 4888 1 1 751 2763 3 0 0 chrX 21824007 21824305 -598522 - Invader3_LTR LTR Gypsy 0 298 1 1 751 602 322 23 33 chrX 21824364 21824669 -598158 - BLASTOPIA_I LTR Gypsy -2150 2331 2030 1 751 346 332 30 30 chrX 21825551 21825818 -597009 - BLASTOPIA_I LTR Gypsy -3336 1145 879 1 751 14835 26 6 9 chrX 21825820 21827571 -595256 - G2_DM LINE Jockey 0 3102 1357 1 751 25 75 0 0 chrX 21828121 21828174 -594653 + AT_rich Low_complexity Low_complexity 1 53 0 1 751 1068 149 85 5 chrX 21828933 21829122 -593705 - Gypsy5_I LTR Gypsy -325 6184 5981 1 751 2004 170 5 18 chrX 21829118 21829513 -593314 - Gypsy5_I LTR Gypsy -755 5754 5365 1 751 7332 149 18 5 chrX 21829509 21830710 -592117 - Gypsy5_I LTR Gypsy -1889 4620 3404 1 751 2165 181 53 2 chrX 21830689 21831089 -591738 - Gypsy5_I LTR Gypsy -4047 2462 2041 1 751 279 0 0 0 chrX 21831089 21831120 -591707 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 751 2165 181 53 2 chrX 21831120 21831151 -591676 - Gypsy5_I LTR Gypsy -4469 2040 2010 1 751 2850 180 2 10 chrX 21831141 21831656 -591171 - Gypsy5_I LTR Gypsy -5067 1442 932 1 751 1393 74 33 51 chrX 21831683 21831898 -590929 - Gypsy6A_LTR LTR Gypsy -209 211 1 1 751 669 218 0 0 chrX 21831898 21832045 -590782 - ROVER-I_DM LTR Gypsy -448 6136 5990 1 751 6826 166 45 7 chrX 21832078 21833319 -589508 - ROVER-I_DM LTR Gypsy -1287 5297 4010 1 751 7947 209 1 0 chrX 21833320 21834850 -587977 - ROVER-I_DM LTR Gypsy -2795 3789 2258 1 751 697 153 13 0 chrX 21834850 21835007 -587820 + (CTATT)n Simple_repeat Simple_repeat 5 163 0 1 751 3235 263 78 70 chrX 21835007 21836837 -585990 - ROVER-I_DM LTR Gypsy -4739 1845 1 1 751 1774 121 80 37 chrX 21836837 21837189 -585638 - ROVER-LTR_DM LTR Gypsy 0 367 1 1 751 855 77 80 58 chrX 21837189 21837326 -585501 - DNAREP1_DM LINE Penelope -107 487 348 1 751 1433 65 90 36 chrX 21837323 21837546 -585281 + DNAREP1_DM LINE Penelope 340 574 -20 1 751 2264 114 87 5 chrX 21837546 21837924 -584903 - PROTOP_A DNA P 0 1105 697 1 751 1855 24 0 0 chrX 21838078 21838290 -584537 + Transib5 DNA Transib 934 1145 -1856 1 751 3387 22 40 21 chrX 21838318 21838740 -584087 + Transib5 DNA Transib 1256 1685 -1316 1 751 2905 32 132 0 chrX 21838740 21839173 -583654 + Transib5 DNA Transib 2117 2606 -395 1 751 276 0 56 0 chrX 21839172 21839208 -583619 - G5_DM LINE Jockey -199 4657 4620 1 751 1195 26 147 0 chrX 21839208 21839364 -583463 + Transib5 DNA Transib 2823 3001 0 1 751 345 94 0 0 chrX 21839368 21839421 -583406 + PROTOP DNA P 1030 1082 -3398 1 751 467 128 235 0 chrX 21839413 21839515 -583312 + PROTOP DNA P 3918 4043 -437 1 751 10161 34 2 1 chrX 21839515 21840712 -582115 + S_DM DNA Tc1 1 1198 -538 1 751 5607 23 0 1 chrX 21840712 21841360 -581467 + PROTOP DNA P 1 647 -3833 1 751 3025 27 21 16 chrX 21841360 21841726 -581101 + PROTOP DNA P 4073 4440 -40 1 751 13001 4 2 0 chrX 21841726 21843158 -579669 + M4DM DNA Transib 1 1435 0 1 751 388 0 122 0 chrX 21843158 21843200 -579627 + PROTOP DNA P 4431 4479 -1 1 751 4853 11 0 0 chrX 21843200 21843745 -579082 + S_DM DNA Tc1 1192 1736 0 1 751 437 181 9 62 chrX 21843745 21843851 -578976 + PROTOP_A DNA P 719 818 -287 1 751 1646 133 275 38 chrX 21843865 21844207 -578620 - Invader1_LTR LTR Gypsy 0 423 1 1 751 1758 74 41 16 chrX 21844207 21844452 -578375 + PROTOP_A DNA P 848 1104 -1 1 751 30 0 0 0 chrX 21844638 21844668 -578159 + AT_rich Low_complexity Low_complexity 1 30 0 1 751 33 25 0 0 chrX 21844730 21844770 -578057 + AT_rich Low_complexity Low_complexity 1 40 0 1 751 28 29 0 0 chrX 21845325 21845360 -577467 + AT_rich Low_complexity Low_complexity 1 35 0 1 751 407 81 35 11 chrX 21848916 21849003 -573824 + (TA)n Simple_repeat Simple_repeat 2 90 0 1 751 469 221 111 76 chrX 21851419 21851644 -571183 - DNAREP1_DM LINE Penelope -328 266 34 1 751 255 31 0 0 chrX 21853446 21853478 -569349 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 751 22 35 0 0 chrX 21853537 21853566 -569261 + AT_rich Low_complexity Low_complexity 1 29 0 1 751 218 253 36 0 chrX 21854268 21854351 -568476 + T-rich Low_complexity Low_complexity 2 87 0 1 751 22 35 0 0 chrX 21856141 21856170 -566657 + AT_rich Low_complexity Low_complexity 1 29 0 1 751 185 154 0 25 chrX 21856622 21856662 -566165 + (ATG)n Simple_repeat Simple_repeat 3 41 0 1 751 5221 120 81 22 chrX 21860517 21861980 -560847 + FB4_DM DNA Tc1 1108 2699 -1390 1 751 257 61 0 0 chrX 21861961 21861994 -560833 - FB4_DM DNA Tc1 -2951 1138 1106 1 751 207 191 0 0 chrX 21864192 21864234 -558593 + A-rich Low_complexity Low_complexity 5 46 0 1 751 240 122 0 0 chrX 21864862 21864903 -557924 + (CCA)n Simple_repeat Simple_repeat 2 42 0 1 751 183 173 0 0 chrX 21866146 21866198 -556629 + (CCA)n Simple_repeat Simple_repeat 1 52 0 1 751 256 287 0 31 chrX 21866344 21866441 -556386 + ROO_I LTR Pao 651 744 -7512 1 751 228 228 12 48 chrX 21870205 21870288 -552539 + A-rich Low_complexity Low_complexity 3 82 0 1 751 25 51 0 0 chrX 21870705 21870744 -552083 + AT_rich Low_complexity Low_complexity 1 39 0 1 751 435 99 132 110 chrX 21874171 21874262 -548565 - Invader1_LTR LTR Gypsy -330 93 1 1 751 5078 41 19 2 chrX 21874685 21875322 -547505 + S2_DM DNA Tc1 1 648 -1087 1 751 23 97 0 0 chrX 21878298 21878370 -544457 + AT_rich Low_complexity Low_complexity 1 72 0 1 751 1703 154 142 23 chrX 21878483 21879004 -543823 + DNAREP1_DM LINE Penelope 64 529 -65 1 751 225 0 0 0 chrX 21880151 21880176 -542651 + (A)n Simple_repeat Simple_repeat 1 25 0 1 751 1376 75 75 0 chrX 21886542 21886729 -536098 - DNAREP1_DM LINE Penelope 0 594 394 1 751 718 116 0 24 chrX 21886779 21886903 -535924 - DNAREP1_DM LINE Penelope -439 155 35 1 751 229 305 0 0 chrX 21887553 21887612 -535215 - DNAREP1_DM LINE Penelope -533 61 3 1 751 1995 169 160 43 chrX 21888038 21888569 -534258 - DNAREP1_DM LINE Penelope 0 594 2 1 751 59 15 0 0 chrX 21888639 21888705 -534122 + AT_rich Low_complexity Low_complexity 1 66 0 1 752 21 0 0 0 chrX 21889747 21889768 -533059 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 610 79 173 8 chrX 21890399 21890526 -532301 - FB4_DM DNA Tc1 -22 4067 3920 1 752 1495 113 166 3 chrX 21890589 21890891 -531936 + FB4_DM DNA Tc1 3739 4089 0 1 752 1137 148 71 19 chrX 21891927 21892196 -530631 + FB4_DM DNA Tc1 3807 4089 0 1 752 21 0 0 0 chrX 21892864 21892885 -529942 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 645 117 132 59 chrX 21894696 21894832 -527995 + DNAREP1_DM LINE Penelope 415 560 -34 1 752 21 0 0 0 chrX 21894843 21894864 -527963 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 3150 103 50 62 chrX 21896238 21896839 -525988 - DNAREP1_DM LINE Penelope 0 594 1 1 752 345 0 0 0 chrX 21898983 21899023 -523804 - DNAREP1_DM LINE Penelope -554 40 1 1 752 32 0 0 0 chrX 21901218 21901250 -521577 + AT_rich Low_complexity Low_complexity 1 32 0 1 752 22 56 0 0 chrX 21901478 21901514 -521313 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 21 0 0 0 chrX 21905099 21905120 -517707 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 23 0 0 0 chrX 21907257 21907280 -515547 + AT_rich Low_complexity Low_complexity 1 23 0 1 752 25 0 0 0 chrX 21907391 21907416 -515411 + AT_rich Low_complexity Low_complexity 1 25 0 1 752 927 133 7 0 chrX 21908042 21908192 -514635 - DMRP1 Unknown Unknown -195 151 1 1 752 2214 155 124 9 chrX 21908263 21908796 -514031 - DNAREP1_DM LINE Penelope 0 594 1 1 752 26 0 0 0 chrX 21910019 21910045 -512782 + AT_rich Low_complexity Low_complexity 1 26 0 1 752 1330 148 229 53 chrX 21910066 21910515 -512312 + DNAREP1_DM LINE Penelope 67 594 0 1 752 2108 116 213 0 chrX 21911648 21912098 -510729 + FB4_DM DNA Tc1 1208 1753 -2336 1 752 3743 40 8 0 chrX 21912097 21912601 -510226 - TRANSIB4 DNA Transib -2102 508 1 1 752 1668 164 11 17 chrX 21912740 21913088 -509739 + DNAREP1_DM LINE Penelope 3 348 -246 1 752 1443 99 223 32 chrX 21915109 21915456 -507371 - DNAREP1_DM LINE Penelope 0 594 182 1 752 252 167 0 0 chrX 21916821 21916869 -505958 + (CATA)n Simple_repeat Simple_repeat 3 50 0 1 752 32 26 0 0 chrX 21918066 21918105 -504722 + AT_rich Low_complexity Low_complexity 1 39 0 1 752 65 0 0 0 chrX 21918269 21918334 -504493 + AT_rich Low_complexity Low_complexity 1 65 0 1 752 993 74 69 134 chrX 21918364 21918566 -504261 - DNAREP1_DM LINE Penelope 0 594 406 1 752 3917 114 83 38 chrX 21918566 21919311 -503516 - Mariner2_DM DNA Tc1 0 912 134 1 752 386 167 0 27 chrX 21919309 21919383 -503444 - DNAREP1_DM LINE Penelope -483 111 40 1 752 21 0 0 0 chrX 21919705 21919726 -503101 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 499 62 0 244 chrX 21920870 21920997 -501830 + DNAREP1_DM LINE Penelope 1 96 -498 1 752 397 57 0 0 chrX 21920994 21921047 -501780 + DNAREP1_DM LINE Penelope 512 564 -30 1 752 243 61 0 0 chrX 21922947 21922980 -499847 + (CAGT)n Simple_repeat Simple_repeat 2 34 0 1 752 1034 123 126 15 chrX 21923659 21923865 -498962 + DNAREP1_DM LINE Penelope 308 536 -58 1 752 203 296 0 0 chrX 21924209 21924263 -498564 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 752 10540 69 487 4 chrX 21924518 21927276 -495551 + FB4_DM DNA Tc1 1 4089 0 1 752 24 53 0 0 chrX 21931610 21931648 -491179 + AT_rich Low_complexity Low_complexity 1 38 0 1 752 222 62 0 0 chrX 21932219 21932251 -490576 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 752 255 231 0 0 chrX 21935586 21935651 -487176 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 752 25 31 0 0 chrX 21935837 21935869 -486958 + AT_rich Low_complexity Low_complexity 1 32 0 1 752 200 275 14 0 chrX 21936800 21936869 -485958 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 752 22 35 0 0 chrX 21938288 21938317 -484510 + AT_rich Low_complexity Low_complexity 1 29 0 1 752 240 111 0 0 chrX 21938727 21938763 -484064 + (TTG)n Simple_repeat Simple_repeat 3 38 0 1 752 23 0 0 0 chrX 21941185 21941208 -481619 + AT_rich Low_complexity Low_complexity 1 23 0 1 752 23 33 0 0 chrX 21942351 21942381 -480446 + AT_rich Low_complexity Low_complexity 1 30 0 1 752 210 91 0 0 chrX 21945031 21945064 -477763 + (TCG)n Simple_repeat Simple_repeat 1 33 0 1 752 23 0 0 0 chrX 21946265 21946288 -476539 + AT_rich Low_complexity Low_complexity 1 23 0 1 752 22 80 0 0 chrX 21946423 21946473 -476354 + AT_rich Low_complexity Low_complexity 1 50 0 1 752 186 133 0 0 chrX 21946919 21946949 -475878 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 752 1190 118 118 82 chrX 21947173 21947478 -475349 - DNAREP1_DM LINE Penelope -50 544 229 1 752 783 111 0 23 chrX 21947485 21947614 -475213 - DNAREP1_DM LINE Penelope -468 126 1 1 752 249 163 0 58 chrX 21947697 21947749 -475078 - DNAREP1_DM LINE Penelope -543 51 3 1 752 26 0 0 0 chrX 21948422 21948448 -474379 + AT_rich Low_complexity Low_complexity 1 26 0 1 752 24 32 0 0 chrX 21948769 21948800 -474027 + AT_rich Low_complexity Low_complexity 1 31 0 1 752 180 0 0 0 chrX 21950561 21950581 -472246 + (T)n Simple_repeat Simple_repeat 1 20 0 1 752 24 53 0 0 chrX 21951624 21951662 -471165 + AT_rich Low_complexity Low_complexity 1 38 0 1 752 21 36 0 0 chrX 21952830 21952858 -469969 + AT_rich Low_complexity Low_complexity 1 28 0 1 752 646 74 0 0 chrX 21953174 21953269 -469558 - S_DM DNA Tc1 -760 976 882 1 752 1514 101 134 2 chrX 21953262 21953673 -469154 - S_DM DNA Tc1 -1139 597 133 1 752 36175 1 0 0 chrX 21953676 21957892 -464935 + DOC6_DM LINE Jockey 1 4216 -6 1 752 186 71 0 0 chrX 21957892 21957920 -464907 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 752 971 51 0 0 chrX 21957920 21958057 -464770 + S_DM DNA Tc1 1600 1736 0 1 752 21 82 0 0 chrX 21958255 21958304 -464523 + AT_rich Low_complexity Low_complexity 1 49 0 1 752 5793 56 155 31 chrX 21958507 21959672 -463155 + TRANSIB2 DNA Transib 3 1311 -1533 1 752 695 85 0 0 chrX 21959739 21959845 -462982 + S_DM DNA Tc1 1631 1736 0 1 752 625 291 59 53 chrX 21959857 21960231 -462596 - DM1731_I LTR Copia -1 3975 3600 1 752 412 341 11 11 chrX 21960230 21960411 -462416 - DM1731_I LTR Copia -603 3373 3193 1 752 569 289 5 24 chrX 21960429 21960635 -462192 - DM1731_I LTR Copia -2238 1738 1537 1 752 423 341 47 19 chrX 21961275 21961699 -461128 - DM1731_I LTR Copia -3262 714 279 1 752 1111 161 168 3 chrX 21961947 21962310 -460517 + Invader1_LTR LTR Gypsy 1 423 0 1 752 11727 89 4 1 chrX 21962482 21964212 -458615 + S_DM DNA Tc1 1 1736 0 1 752 22 0 0 0 chrX 21964653 21964675 -458152 + AT_rich Low_complexity Low_complexity 1 22 0 1 752 25 0 0 0 chrX 21965093 21965118 -457709 + AT_rich Low_complexity Low_complexity 1 25 0 1 752 21 0 0 0 chrX 21965197 21965218 -457609 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 24 0 0 0 chrX 21966349 21966373 -456454 + AT_rich Low_complexity Low_complexity 1 24 0 1 752 2597 79 0 0 chrX 21966481 21966859 -455968 + Transib5 DNA Transib 56 433 -2568 1 752 43658 5 0 2 chrX 21966894 21971917 -450910 + LINEJ1_DM LINE Jockey 7 5020 0 1 752 6888 98 25 40 chrX 21971930 21973328 -449499 + BARI1 DNA Tc1 40 1405 -323 1 752 1723 52 0 4 chrX 21973383 21973615 -449212 + Transib5 DNA Transib 812 1042 -1959 1 752 2762 42 0 0 chrX 21973614 21973972 -448855 + Transib5 DNA Transib 1202 1559 -1442 1 752 1571 26 0 0 chrX 21973970 21974165 -448662 + Transib5 DNA Transib 1734 1928 -1073 1 752 5773 58 46 2 chrX 21974184 21975018 -447809 + Transib5 DNA Transib 2086 2955 -46 1 752 1621 287 83 19 chrX 21975063 21975759 -447068 - BLASTOPIA_I LTR Gypsy -203 4278 3538 1 752 1347 301 43 17 chrX 21975791 21976424 -446403 - BLASTOPIA_I LTR Gypsy -1106 3375 2727 1 752 289 253 13 0 chrX 21976422 21976501 -446326 - BLASTOPIA_I LTR Gypsy -2069 2412 2333 1 752 228 357 46 32 chrX 21976546 21976763 -446064 - BLASTOPIA_I LTR Gypsy -3084 1397 1178 1 752 385 225 0 0 chrX 21977532 21977621 -445206 - SAR_DM Satellite Satellite -429 1043 955 1 752 290 125 0 0 chrX 21977832 21977880 -444947 + Transib-N1_DM DNA Transib 21 68 -446 1 752 1445 82 78 0 chrX 21977887 21978106 -444721 - DNAREP1_DM LINE Penelope 0 594 359 1 752 257 40 122 0 chrX 21978192 21978266 -444561 + (TATAA)n Simple_repeat Simple_repeat 1 83 0 1 752 1639 135 23 71 chrX 21978419 21978811 -444016 + DM297_LTR LTR Gypsy 42 414 0 1 752 36 23 0 0 chrX 21980938 21980981 -441846 + AT_rich Low_complexity Low_complexity 1 43 0 1 752 22 80 0 0 chrX 21982652 21982702 -440125 + AT_rich Low_complexity Low_complexity 1 50 0 1 752 183 162 0 0 chrX 21984398 21984435 -438392 + (CATA)n Simple_repeat Simple_repeat 4 40 0 1 752 22 0 0 0 chrX 21985603 21985625 -437202 + AT_rich Low_complexity Low_complexity 1 22 0 1 752 1410 93 112 17 chrX 21987958 21988199 -434628 + DNAREP1_DM LINE Penelope 314 577 -17 1 752 287 193 0 0 chrX 21990017 21990074 -432753 + DNAREP1_DM LINE Penelope 6 62 -532 1 752 25 0 0 0 chrX 21993689 21993714 -429113 + AT_rich Low_complexity Low_complexity 1 25 0 1 752 1818 117 50 25 chrX 21993999 21994449 -428378 + DNAREP1_DM LINE Penelope 2 594 0 1 752 25 31 0 0 chrX 21994524 21994556 -428271 + AT_rich Low_complexity Low_complexity 1 32 0 1 752 22 56 0 0 chrX 21996321 21996357 -426470 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 219 300 0 0 chrX 21996807 21996887 -425940 + A-rich Low_complexity Low_complexity 1 80 0 1 752 218 284 27 0 chrX 21997951 21998025 -424802 + (CAT)n Simple_repeat Simple_repeat 3 78 0 1 752 22 0 0 0 chrX 21998156 21998178 -424649 + AT_rich Low_complexity Low_complexity 1 22 0 1 752 1532 121 158 21 chrX 21998230 21998647 -424180 + DNAREP1_DM LINE Penelope 2 475 -119 1 752 194 216 0 13 chrX 21998952 21999027 -423800 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 752 625 90 0 33 chrX 22001804 22001896 -420931 + DNAREP1_DM LINE Penelope 1 89 -505 1 752 734 83 190 0 chrX 22001932 22002053 -420774 + DNAREP1_DM LINE Penelope 451 594 0 1 752 30 45 0 0 chrX 22002081 22002125 -420702 + AT_rich Low_complexity Low_complexity 1 44 0 1 752 204 278 0 0 chrX 22002427 22002481 -420346 + CT-rich Low_complexity Low_complexity 6 59 0 1 752 243 79 0 0 chrX 22002520 22002558 -420269 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 752 3418 96 73 12 chrX 22003792 22004351 -418476 - DNAREP1_DM LINE Penelope 0 594 2 1 752 429 54 0 0 chrX 22004356 22004412 -418415 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1 752 21 0 0 0 chrX 22004520 22004541 -418286 + AT_rich Low_complexity Low_complexity 1 21 0 1 752 189 0 0 0 chrX 22006073 22006094 -416733 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 752 218 200 0 0 chrX 22006492 22006537 -416290 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 752 226 274 0 0 chrX 22010714 22010787 -412040 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 752 253 293 10 0 chrX 22010851 22010950 -411877 + (TG)n Simple_repeat Simple_repeat 1 100 0 1 752 267 237 13 13 chrX 22011756 22011833 -410994 + (CAA)n Simple_repeat Simple_repeat 1 77 0 1 752 202 149 0 60 chrX 22012298 22012348 -410479 + A-rich Low_complexity Low_complexity 2 48 0 1 752 228 0 0 161 chrX 22012828 22014713 -408114 + (CAGTC)n Simple_repeat Simple_repeat 1 1581 0 1 752 227 311 0 0 chrX 22015772 22015833 -406994 - DNAREP1_DM LINE Penelope -533 61 1 1 752 22 0 0 0 chrX 22016282 22016304 -406523 + AT_rich Low_complexity Low_complexity 1 22 0 1 752 225 119 0 0 chrX 22016663 22016705 -406122 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 752 41 21 0 0 chrX 22016950 22016998 -405829 + AT_rich Low_complexity Low_complexity 1 48 0 1 752 216 0 0 0 chrX 22018277 22018301 -404526 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 752 694 232 35 67 chrX 22019240 22019494 -403333 + DNAREP1_DM LINE Penelope 349 594 0 1 752 210 91 0 0 chrX 22019802 22019835 -402992 + (A)n Simple_repeat Simple_repeat 1 33 0 1 753 494 96 19 19 chrX 22021940 22022046 -400781 + (TAA)n Simple_repeat Simple_repeat 2 107 0 1 753 180 0 0 0 chrX 22022093 22022113 -400714 + (TAA)n Simple_repeat Simple_repeat 1 20 0 1 753 3523 5 7 7 chrX 22022377 22022791 -400036 + DM297_LTR LTR Gypsy 1 414 0 1 753 41052 8 0 0 chrX 22022791 22027540 -395287 + DM297_I LTR Gypsy 1 4750 -1417 1 753 5283 12 0 0 chrX 22027523 22028174 -394653 + DM297_I LTR Gypsy 5517 6167 0 1 753 3523 5 7 7 chrX 22028174 22028588 -394239 + DM297_LTR LTR Gypsy 1 414 0 1 753 37 0 0 0 chrX 22029282 22029319 -393508 + AT_rich Low_complexity Low_complexity 1 37 0 1 753 184 30 0 57 chrX 22029619 22029654 -393173 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 753 1230 134 151 10 chrX 22031002 22031375 -391452 - DNAREP1_DM LINE Penelope -39 555 1 1 753 28 29 0 0 chrX 22031501 22031536 -391291 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 237 33 0 0 chrX 22033174 22033204 -389623 + (A)n Simple_repeat Simple_repeat 1 30 0 1 753 211 93 23 23 chrX 22034219 22034263 -388564 + (CAAAAA)n Simple_repeat Simple_repeat 1 44 0 1 753 1156 172 63 45 chrX 22035123 22035581 -387246 - DNAREP1_DM LINE Penelope 0 594 2 1 753 29 47 0 0 chrX 22037033 22037076 -385751 + AT_rich Low_complexity Low_complexity 1 43 0 1 753 620 94 0 0 chrX 22037426 22037511 -385316 - DNAREP1_DM LINE Penelope 0 594 510 1 753 21 36 0 0 chrX 22037566 22037594 -385233 + AT_rich Low_complexity Low_complexity 1 28 0 1 753 1649 183 112 58 chrX 22037762 22038227 -384600 - DNAREP1_DM LINE Penelope -104 490 1 1 753 23 54 0 0 chrX 22038919 22038956 -383871 + AT_rich Low_complexity Low_complexity 1 37 0 1 753 23 54 0 0 chrX 22039556 22039593 -383234 + AT_rich Low_complexity Low_complexity 1 37 0 1 753 917 143 235 35 chrX 22039852 22040347 -382480 + DNAREP1_DM LINE Penelope 1 476 -118 1 753 382 117 0 0 chrX 22041374 22041434 -381393 - DMCR1A LINE CR1 -18 4452 4393 1 753 797 184 78 5 chrX 22041445 22041636 -381191 - DMCR1A LINE CR1 -157 4313 4109 1 753 2840 161 199 12 chrX 22041637 22042634 -380193 - DMCR1A LINE CR1 -1911 2559 1376 1 753 1895 150 86 79 chrX 22042633 22043075 -379752 - DNAREP1_DM LINE Penelope -33 561 117 1 753 981 30 23 0 chrX 22043118 22043250 -379577 - TC1_DM DNA Tc1 -107 1559 1425 1 753 1140 28 7 0 chrX 22043254 22043395 -379432 - DMTOM1_LTR LTR Gypsy -9 401 260 1 753 239 0 32 0 chrX 22043395 22043426 -379401 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 753 24 0 0 0 chrX 22043552 22043576 -379251 + AT_rich Low_complexity Low_complexity 1 24 0 1 753 1747 129 94 65 chrX 22043904 22044286 -378541 + DNAREP1_DM LINE Penelope 202 594 0 1 753 24 53 0 0 chrX 22044727 22044765 -378062 + AT_rich Low_complexity Low_complexity 1 38 0 1 753 26 30 0 0 chrX 22045597 22045630 -377197 + AT_rich Low_complexity Low_complexity 1 33 0 1 753 279 323 131 57 chrX 22046172 22046754 -376073 + LINEJ1_DM LINE Jockey 1971 2595 -2425 1 753 23 0 0 0 chrX 22047378 22047401 -375426 + AT_rich Low_complexity Low_complexity 1 23 0 1 753 537 258 7 7 chrX 22047661 22047813 -375014 - MDG3_I LTR Gypsy -2604 2382 2231 1 753 453 251 168 24 chrX 22048507 22048715 -374112 - Invader3_I LTR Gypsy -3427 1461 1224 1 753 395 127 56 14 chrX 22048932 22049004 -373823 - DNAREP1_DM LINE Penelope -132 462 388 1 753 972 169 42 0 chrX 22049089 22049278 -373549 - DNAREP1_DM LINE Penelope -380 214 18 1 753 924 131 248 9 chrX 22053344 22053659 -369168 - DNAREP1_DM LINE Penelope -114 480 91 1 753 258 32 0 0 chrX 22053768 22053799 -369028 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 753 23 0 0 0 chrX 22055444 22055467 -367360 + AT_rich Low_complexity Low_complexity 1 23 0 1 753 317 131 22 56 chrX 22055534 22055623 -367204 + DNAREP1_DM LINE Penelope 117 202 -392 1 753 900 105 209 0 chrX 22055625 22055797 -367030 + DNAREP1_DM LINE Penelope 387 594 0 1 753 291 28 0 0 chrX 22057096 22057132 -365695 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 753 21 0 0 0 chrX 22057579 22057600 -365227 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 1357 158 254 0 chrX 22057623 22057988 -364839 - DNAREP1_DM LINE Penelope 0 594 1 1 753 27 0 0 0 chrX 22060048 22060075 -362752 + AT_rich Low_complexity Low_complexity 1 27 0 1 753 228 179 0 56 chrX 22061707 22061778 -361049 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 1 753 21 0 0 0 chrX 22063770 22063791 -359036 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 243 0 0 0 chrX 22066484 22066511 -356316 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1 753 22 35 0 0 chrX 22067769 22067798 -355029 + AT_rich Low_complexity Low_complexity 1 29 0 1 753 205 228 9 47 chrX 22068199 22068305 -354522 + (TTTA)n Simple_repeat Simple_repeat 3 104 0 1 753 32 0 0 0 chrX 22070629 22070661 -352166 + AT_rich Low_complexity Low_complexity 1 32 0 1 753 807 211 17 46 chrX 22073670 22073909 -348918 + DNAREP1_DM LINE Penelope 84 315 -279 1 753 535 98 12 0 chrX 22074055 22074137 -348690 - DNAREP1_DM LINE Penelope 0 594 512 1 753 491 120 250 0 chrX 22074135 22074235 -348592 - DNAREP1_DM LINE Penelope -469 125 1 1 753 25 0 0 0 chrX 22074288 22074313 -348514 + AT_rich Low_complexity Low_complexity 1 25 0 1 753 225 218 0 0 chrX 22074542 22074620 -348207 + (CAGT)n Simple_repeat Simple_repeat 4 81 0 1 753 21 0 0 0 chrX 22075690 22075711 -347116 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 29 47 0 0 chrX 22078155 22078198 -344629 + AT_rich Low_complexity Low_complexity 1 43 0 1 753 210 130 0 61 chrX 22081916 22081965 -340862 + (CATTC)n Simple_repeat Simple_repeat 5 50 0 1 753 1171 112 5 9 chrX 22082164 22082380 -340447 - FB4_DM DNA Tc1 -1333 2756 2542 1 753 367 187 0 36 chrX 22082377 22082488 -340339 + DNAREP1_DM LINE Penelope 70 176 -418 1 753 956 146 33 102 chrX 22083460 22083704 -339123 + DMLTR5 LTR Gypsy 40 266 0 1 753 2063 87 42 31 chrX 22083703 22084058 -338769 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 1 753 34 42 0 0 chrX 22084073 22084121 -338706 + AT_rich Low_complexity Low_complexity 1 48 0 1 753 28638 138 1 8 chrX 22084284 22088921 -333906 + HMSBEAGLE_I LTR Gypsy 1212 5818 -711 1 753 1630 209 40 119 chrX 22089300 22089907 -332920 + HMSBEAGLE_I LTR Gypsy 5810 6368 -161 1 753 295 109 0 0 chrX 22090170 22090216 -332611 + HMSBEAGLE_I LTR Gypsy 6360 6405 -124 1 753 793 135 0 0 chrX 22090315 22090441 -332386 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 1 753 956 146 33 102 chrX 22090529 22090773 -332054 + DMLTR5 LTR Gypsy 40 266 0 1 753 585 0 0 14 chrX 22090943 22091014 -331813 - Mariner2_DM DNA Tc1 -842 70 1 1 753 229 214 0 0 chrX 22091728 22091770 -331057 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 1 753 21 36 0 0 chrX 22094473 22094501 -328326 + AT_rich Low_complexity Low_complexity 1 28 0 1 753 198 103 0 0 chrX 22095540 22095569 -327258 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 753 2040 111 69 18 chrX 22095737 22096128 -326699 + DNAREP1_DM LINE Penelope 58 589 -5 1 753 22 0 0 0 chrX 22096220 22096242 -326585 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 237 33 0 0 chrX 22096644 22096674 -326153 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 1 753 24 77 0 0 chrX 22096993 22097045 -325782 + AT_rich Low_complexity Low_complexity 1 52 0 1 753 36212 0 0 0 chrX 22099398 22103618 -319209 - DOC6_DM LINE Jockey 0 4222 3 1 753 421 114 139 0 chrX 22103807 22103886 -318941 - DNAREP1_DM LINE Penelope -2 592 503 1 753 2590 24 67 0 chrX 22103889 22104218 -318609 - Invader5_LTR LTR Gypsy -1 351 1 1 753 25483 12 0 0 chrX 22104217 22107556 -315271 - Invader5_I LTR Gypsy 0 3334 1 1 753 623 172 36 36 chrX 22107593 22107732 -315095 - DNAREP1_DM LINE Penelope -209 385 247 1 753 533 126 69 0 chrX 22107702 22107789 -315038 - DNAREP1_DM LINE Penelope -501 93 1 1 753 30 27 0 0 chrX 22110622 22110659 -312168 + AT_rich Low_complexity Low_complexity 1 37 0 1 753 6756 121 78 0 chrX 22110663 22111747 -311080 - DMRT1B LINE R1 -130 5053 3886 1 753 4522 127 164 2 chrX 22111763 22113484 -309343 - DMRT1B LINE R1 -3103 2080 1 1 753 2007 128 100 27 chrX 22113699 22114068 -308759 - PROTOP_A DNA P 0 1105 710 1 753 210 118 0 0 chrX 22114072 22114106 -308721 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 753 400 108 0 0 chrX 22114160 22114225 -308602 - PROTOP DNA P -3399 1081 1017 1 753 547 122 0 18 chrX 22114233 22114342 -308485 - PROTOP DNA P -3782 698 591 1 753 1676 85 72 8 chrX 22114339 22114575 -308252 - PROTOP_A DNA P -854 251 1 1 753 517 232 80 50 chrX 22114600 22114800 -308027 - G5_DM LINE Jockey -4303 553 348 1 753 319 216 22 11 chrX 22114801 22114890 -307937 - BS2 LINE Jockey -4607 114 25 1 753 3238 99 138 2 chrX 22115090 22115606 -307221 - DNAREP1_DM LINE Penelope -7 587 2 1 753 23 33 0 0 chrX 22115684 22115714 -307113 + AT_rich Low_complexity Low_complexity 1 30 0 1 753 188 200 0 16 chrX 22115931 22115992 -306835 + (TATG)n Simple_repeat Simple_repeat 4 63 0 1 753 1427 154 128 27 chrX 22116318 22116840 -305987 + DNAREP1_DM LINE Penelope 1 445 -149 1 753 450 92 0 0 chrX 22116867 22116932 -305895 + DNAREP1_DM LINE Penelope 529 593 -1 1 753 21 82 0 0 chrX 22117381 22117430 -305397 + AT_rich Low_complexity Low_complexity 1 49 0 1 753 23 78 0 0 chrX 22118854 22118905 -303922 + AT_rich Low_complexity Low_complexity 1 51 0 1 753 23 0 0 0 chrX 22120191 22120214 -302613 + AT_rich Low_complexity Low_complexity 1 23 0 1 753 1902 119 228 11 chrX 22120987 22121504 -301323 + DMRT1C LINE R1 6 634 -4809 1 753 2084 114 3 9 chrX 22121519 22121847 -300980 + DMRT1C LINE R1 1031 1356 -4087 1 753 253 196 0 0 chrX 22121892 22121938 -300889 + DMRT1C LINE R1 1504 1549 -3894 1 753 1708 112 0 0 chrX 22121934 22122183 -300644 + DMRT1C LINE R1 2920 3168 -2275 1 753 1520 92 109 0 chrX 22122182 22122420 -300407 + DMRT1C LINE R1 5010 5273 -170 1 753 275 136 0 0 chrX 22122422 22122466 -300361 + PROTOP_B DNA P 68 111 -1042 1 753 699 52 258 11 chrX 22122453 22122620 -300207 + PROTOP_B DNA P 423 630 -523 1 753 2308 65 7 0 chrX 22122625 22122915 -299912 + PROTOP_B DNA P 862 1153 0 1 753 6199 241 81 24 chrX 22122915 22124881 -297946 + G5_DM LINE Jockey 592 2669 -2187 1 753 4487 63 72 0 chrX 22124896 22125494 -297333 + G5A_DM LINE Jockey 1057 1697 -1144 1 753 5156 115 23 13 chrX 22125504 22126319 -296508 + G5_DM LINE Jockey 1747 2476 -365 1 753 1011 93 137 55 chrX 22126310 22126492 -296335 + G5_DM LINE Jockey 2637 2833 -8 1 753 2032 149 27 38 chrX 22127960 22128457 -294370 - HELENA_RT LINE Jockey 0 1317 1005 1 753 4478 167 53 41 chrX 22128426 22129444 -293383 - HELENA_RT LINE Jockey -423 894 1 1 753 367 376 28 4 chrX 22129474 22129725 -293102 - HELENA_RT LINE Jockey -1904 3222 2966 1 753 2389 87 120 13 chrX 22129997 22130380 -292447 + PROTOP DNA P 1 424 -4056 1 753 322 123 200 0 chrX 22130422 22130487 -292340 - Transib-N1_DM DNA Transib -396 118 41 1 753 495 184 8 42 chrX 22130507 22130626 -292201 - Transib-N1_DM DNA Transib -399 115 1 1 753 1525 161 32 35 chrX 22131004 22131320 -291507 - BS3_DM LINE Jockey -5 1785 1471 1 753 4471 172 21 3 chrX 22131315 22132294 -290533 - BS3_DM LINE Jockey -797 993 350 1 753 2758 234 123 8 chrX 22132301 22133041 -289786 - BS2 LINE Jockey -2164 2557 1733 1 753 216 188 0 20 chrX 22135334 22135383 -287444 + (CCA)n Simple_repeat Simple_repeat 1 48 0 1 753 24 91 0 0 chrX 22135962 22136028 -286799 + AT_rich Low_complexity Low_complexity 1 66 0 1 753 189 0 0 0 chrX 22138162 22138183 -284644 + (T)n Simple_repeat Simple_repeat 1 21 0 1 753 206 98 0 47 chrX 22139003 22139046 -283781 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 1 753 21 57 0 0 chrX 22139624 22139659 -283168 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 1909 116 36 116 chrX 22140434 22140884 -281943 + DM297_LTR LTR Gypsy 1 414 0 1 753 33 25 0 0 chrX 22141748 22141788 -281039 + AT_rich Low_complexity Low_complexity 1 40 0 1 753 24 0 0 0 chrX 22143458 22143482 -279345 + AT_rich Low_complexity Low_complexity 1 24 0 1 753 717 220 17 59 chrX 22143543 22143780 -279047 + DNAREP1_DM LINE Penelope 67 293 -301 1 753 1713 124 312 18 chrX 22143781 22144175 -278652 + DNAREP1_DM LINE Penelope 84 594 0 1 753 189 121 0 0 chrX 22145034 22145067 -277760 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1 753 1838 150 45 72 chrX 22145864 22146596 -276231 + DNAREP1_DM LINE Penelope 1 579 -15 1 753 25 83 0 0 chrX 22147821 22147881 -274946 + AT_rich Low_complexity Low_complexity 1 60 0 1 754 26 0 0 0 chrX 22151179 22151205 -271622 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 24 53 0 0 chrX 22151355 22151393 -271434 + AT_rich Low_complexity Low_complexity 1 38 0 1 754 23 0 0 0 chrX 22152274 22152297 -270530 + AT_rich Low_complexity Low_complexity 1 23 0 1 754 213 39 0 0 chrX 22153830 22153856 -268971 + (CATATA)n Simple_repeat Simple_repeat 5 30 0 1 754 50 18 0 0 chrX 22155122 22155179 -267648 + AT_rich Low_complexity Low_complexity 1 57 0 1 754 255 242 87 48 chrX 22155193 22155297 -267530 + DM1731_I LTR Copia 70 177 -3799 1 754 499 338 52 19 chrX 22155400 22155768 -267059 + DM1731_I LTR Copia 336 715 -3261 1 754 297 362 47 23 chrX 22155967 22156267 -266560 + DM1731_I LTR Copia 952 1258 -2718 1 754 479 300 111 21 chrX 22156314 22156593 -266234 + DM1731_I LTR Copia 1662 1965 -2011 1 754 225 175 48 81 chrX 22156816 22156878 -265949 + HETA LINE telomeric 3931 3990 -2091 1 754 307 303 57 66 chrX 22156935 22157147 -265680 + DM1731_I LTR Copia 3763 3972 -4 1 754 1190 75 0 10 chrX 22157379 22157690 -265137 + (TAA)n Simple_repeat Simple_repeat 1 307 0 1 754 866 106 49 263 chrX 22157704 22158012 -264815 + DNAREP1_DM LINE Penelope 20 261 -333 1 754 21 57 0 0 chrX 22158012 22158047 -264780 + AT_rich Low_complexity Low_complexity 1 35 0 1 754 426 55 0 0 chrX 22159479 22159534 -263293 + DNAREP1_DM LINE Penelope 31 85 -509 1 754 789 92 381 0 chrX 22159529 22159739 -263088 + DNAREP1_DM LINE Penelope 305 594 0 1 754 320 217 33 0 chrX 22159661 22159753 -263074 - P_DG DNA P -54 2834 2740 1 754 210 91 0 0 chrX 22160133 22160166 -262661 + (A)n Simple_repeat Simple_repeat 1 33 0 1 754 25 51 0 0 chrX 22160913 22160952 -261875 + AT_rich Low_complexity Low_complexity 1 39 0 1 754 293 125 18 0 chrX 22161273 22161329 -261498 + (ACTG)n Simple_repeat Simple_repeat 3 59 0 1 754 26 0 0 0 chrX 22161783 22161809 -261018 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 202 211 0 0 chrX 22164343 22164395 -258432 + A-rich Low_complexity Low_complexity 4 55 0 1 754 21 36 0 0 chrX 22165322 22165350 -257477 + AT_rich Low_complexity Low_complexity 1 28 0 1 754 744 94 43 0 chrX 22166902 22167019 -255808 - DNAREP1_DM LINE Penelope -461 133 12 1 754 200 333 0 0 chrX 22167304 22167367 -255460 + (CAGA)n Simple_repeat Simple_repeat 4 66 0 1 754 278 203 14 0 chrX 22167687 22167756 -255071 + HOBO DNA hAT 121 190 -2826 1 754 362 189 108 0 chrX 22167833 22167944 -254883 - DNAREP1_DM LINE Penelope -100 494 372 1 754 32 0 0 0 chrX 22171610 22171642 -251185 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 226 156 0 22 chrX 22172478 22172524 -250303 + Transib5 DNA Transib 2957 3001 0 1 754 475 130 259 0 chrX 22172745 22172853 -249974 - HOBO DNA hAT -190 2826 2691 1 754 21 57 0 0 chrX 22172859 22172894 -249933 + AT_rich Low_complexity Low_complexity 1 35 0 1 754 22 0 0 0 chrX 22172976 22172998 -249829 + AT_rich Low_complexity Low_complexity 1 22 0 1 754 586 111 25 25 chrX 22173049 22173169 -249658 - HOBO DNA hAT -687 2329 2210 1 754 3368 5 7 7 chrX 22173396 22173810 -249017 - DM297_LTR LTR Gypsy 0 414 1 1 754 14152 8 0 0 chrX 22173810 22175549 -247278 - DM297_I LTR Gypsy 0 6167 4429 1 754 5482 13 3 1 chrX 22175529 22176216 -246611 - DM297_I LTR Gypsy -5479 688 1 1 754 3368 5 7 7 chrX 22176216 22176630 -246197 - DM297_LTR LTR Gypsy 0 414 1 1 754 226 29 0 0 chrX 22177869 22177904 -244923 + DNAREP1_DM LINE Penelope 227 261 -333 1 754 1095 98 75 30 chrX 22177932 22178132 -244695 + DNAREP1_DM LINE Penelope 386 594 0 1 754 209 196 0 0 chrX 22178797 22178843 -243984 + (ATG)n Simple_repeat Simple_repeat 1 46 0 1 754 21 0 0 0 chrX 22179032 22179053 -243774 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 25 31 0 0 chrX 22181953 22181985 -240842 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 1287 138 59 27 chrX 22182008 22182576 -240251 + DNAREP1_DM LINE Penelope 83 580 -14 1 754 183 100 0 0 chrX 22184325 22184355 -238472 + (TCG)n Simple_repeat Simple_repeat 2 31 0 1 754 207 171 0 0 chrX 22184869 22184904 -237923 + (CTG)n Simple_repeat Simple_repeat 2 36 0 1 754 21 0 0 0 chrX 22185210 22185231 -237596 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 374 258 65 59 chrX 22185593 22185762 -237065 - DNAREP1_DM LINE Penelope -143 451 282 1 754 405 150 102 74 chrX 22185773 22185881 -236946 - DNAREP1_DM LINE Penelope -481 113 3 1 754 1106 97 233 65 chrX 22186127 22186409 -236418 - DNAREP1_DM LINE Penelope -8 586 258 1 754 2548 68 123 0 chrX 22186410 22186808 -236019 - Mariner2_DM DNA Tc1 0 912 466 1 754 1109 21 68 20 chrX 22186794 22186942 -235885 - Mariner2_DM DNA Tc1 -757 155 1 1 754 1393 79 69 0 chrX 22186979 22187195 -235632 - DNAREP1_DM LINE Penelope -363 231 1 1 754 29 0 0 0 chrX 22188389 22188418 -234409 + AT_rich Low_complexity Low_complexity 1 29 0 1 754 2713 136 76 32 chrX 22190514 22191083 -231744 + DNAREP1_DM LINE Penelope 1 594 0 1 754 26 0 0 0 chrX 22191208 22191234 -231593 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 253 342 13 20 chrX 22193564 22193713 -229114 + GA-rich Low_complexity Low_complexity 2 149 0 1 754 1967 161 35 63 chrX 22196274 22196806 -226021 - DNAREP1_DM LINE Penelope 0 594 117 1 754 614 71 153 0 chrX 22196825 22196923 -225904 - DNAREP1_DM LINE Penelope -480 114 2 1 754 1260 161 151 78 chrX 22197050 22197529 -225298 + Transib-N1_DM DNA Transib 1 514 0 1 754 192 125 0 0 chrX 22199288 22199320 -223507 + (CCCCG)n Simple_repeat Simple_repeat 3 34 0 1 754 23 33 0 0 chrX 22200303 22200333 -222494 + AT_rich Low_complexity Low_complexity 1 30 0 1 754 189 0 0 0 chrX 22200370 22200391 -222436 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1 754 22 0 0 0 chrX 22200899 22200921 -221906 + AT_rich Low_complexity Low_complexity 1 22 0 1 754 30 0 0 0 chrX 22201650 22201680 -221147 + AT_rich Low_complexity Low_complexity 1 30 0 1 754 231 88 0 0 chrX 22202329 22202363 -220464 + (AGCTG)n Simple_repeat Simple_repeat 1 34 0 1 754 22 0 0 0 chrX 22203076 22203098 -219729 + AT_rich Low_complexity Low_complexity 1 22 0 1 754 25 51 0 0 chrX 22205624 22205663 -217164 + AT_rich Low_complexity Low_complexity 1 39 0 1 754 294 29 0 0 chrX 22205777 22205812 -217015 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 754 1045 123 10 1 chrX 22208170 22208365 -214462 + DNAREP1_DM LINE Penelope 36 359 -235 1 754 906 123 58 0 chrX 22208392 22208547 -214280 + DNAREP1_DM LINE Penelope 431 594 0 1 754 22 0 0 0 chrX 22209504 22209526 -213301 + AT_rich Low_complexity Low_complexity 1 22 0 1 754 231 227 0 0 chrX 22213014 22213058 -209769 + (CCCTAG)n Simple_repeat Simple_repeat 3 46 0 1 754 27 29 0 0 chrX 22213873 22213907 -208920 + AT_rich Low_complexity Low_complexity 1 34 0 1 754 43097 1 1 0 chrX 22213907 22218593 -204234 + FW_DM LINE Jockey 1 4692 0 1 754 22 56 0 0 chrX 22219775 22219811 -203016 + AT_rich Low_complexity Low_complexity 1 36 0 1 754 288 87 22 0 chrX 22220991 22221037 -201790 - Mariner2_DM DNA Tc1 -564 348 302 1 754 735 78 0 10 chrX 22221028 22221131 -201696 - Mariner2_DM DNA Tc1 -808 104 3 1 754 25 0 0 0 chrX 22223016 22223041 -199786 + AT_rich Low_complexity Low_complexity 1 25 0 1 754 6187 135 114 79 chrX 22223597 22223810 -199017 + Gypsy12A_LTR LTR Gypsy 2 258 -2022 1 754 185 0 0 39 chrX 22223810 22223836 -198991 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 754 6187 135 114 79 chrX 22223836 22225098 -197729 + Gypsy12A_LTR LTR Gypsy 259 1527 -753 1 754 825 125 0 0 chrX 22225099 22225227 -197600 + BS LINE Jockey 4998 5125 -1 1 754 3429 105 113 113 chrX 22225201 22225996 -196831 + Gypsy12A_LTR LTR Gypsy 1486 2280 0 1 754 37 0 0 0 chrX 22226003 22226040 -196787 + AT_rich Low_complexity Low_complexity 1 37 0 1 754 200 200 0 0 chrX 22228770 22228810 -194017 + (CACTA)n Simple_repeat Simple_repeat 5 44 0 1 754 198 0 0 0 chrX 22229321 22229343 -193484 + (TGG)n Simple_repeat Simple_repeat 3 24 0 1 754 192 40 0 0 chrX 22232334 22232359 -190468 + (CTG)n Simple_repeat Simple_repeat 1 25 0 1 754 24 103 0 0 chrX 22232834 22232921 -189906 + AT_rich Low_complexity Low_complexity 1 87 0 1 754 659 169 216 32 chrX 22234902 22235092 -187735 - HOBO DNA hAT 0 3016 2792 1 754 741 192 0 0 chrX 22235114 22235244 -187583 - HOBO DNA hAT -2886 130 1 1 754 241 185 0 0 chrX 22235293 22235347 -187480 - ROO_I LTR Pao -7560 696 643 1 754 210 114 43 43 chrX 22235709 22235755 -187072 + T-rich Low_complexity Low_complexity 6 51 0 1 754 225 186 33 17 chrX 22236460 22236520 -186307 + T-rich Low_complexity Low_complexity 5 65 0 1 754 402 204 10 31 chrX 22236911 22237007 -185820 + DNAREP1_DM LINE Penelope 363 456 -138 1 754 26 0 0 0 chrX 22238066 22238092 -184735 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 198 0 0 0 chrX 22238816 22238838 -183989 + (T)n Simple_repeat Simple_repeat 1 22 0 1 754 367 242 91 0 chrX 22239836 22239968 -182859 + P_DG DNA P 2742 2885 -3 1 754 2886 104 126 43 chrX 22239968 22240391 -182436 - DNAREP1_DM LINE Penelope -126 468 2 1 754 295 189 0 0 chrX 22240435 22240488 -182339 + DNAREP1_DM LINE Penelope 1 53 -541 1 754 21 36 0 0 chrX 22240491 22240519 -182308 + AT_rich Low_complexity Low_complexity 1 28 0 1 754 22 35 0 0 chrX 22242114 22242143 -180684 + AT_rich Low_complexity Low_complexity 1 29 0 1 754 201 267 0 16 chrX 22242727 22242788 -180039 + (TATG)n Simple_repeat Simple_repeat 2 61 0 1 754 21 0 0 0 chrX 22243096 22243117 -179710 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 21 0 0 0 chrX 22243375 22243396 -179431 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 25 31 0 0 chrX 22243714 22243746 -179081 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 8020 78 27 8 chrX 22243746 22244487 -178340 + FB4_DM DNA Tc1 1092 1841 -2248 1 754 191 36 36 0 chrX 22244487 22244515 -178312 + (CTAAT)n Simple_repeat Simple_repeat 4 32 0 1 754 8020 75 114 6 chrX 22244515 22245340 -177487 + FB4_DM DNA Tc1 1842 2760 -1329 1 754 282 81 0 0 chrX 22245307 22245344 -177483 - FB4_DM DNA Tc1 -2951 1138 1102 1 754 970 219 70 100 chrX 22245900 22246301 -176526 + DNAREP1_DM LINE Penelope 206 594 0 1 754 1954 109 92 7 chrX 22251124 22251641 -171186 + DNAREP1_DM LINE Penelope 1 594 0 1 754 225 123 0 44 chrX 22253356 22253424 -169403 + (TGG)n Simple_repeat Simple_repeat 2 66 0 1 754 192 77 0 0 chrX 22256544 22256570 -166257 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1 754 704 186 87 29 chrX 22257319 22257491 -165336 + DNAREP1_DM LINE Penelope 1 182 -412 1 754 1879 127 128 90 chrX 22257495 22257972 -164855 + DNAREP1_DM LINE Penelope 83 577 -17 1 754 206 163 23 0 chrX 22258183 22258226 -164601 + (TATG)n Simple_repeat Simple_repeat 3 46 0 1 754 23 0 0 0 chrX 22258228 22258251 -164576 + AT_rich Low_complexity Low_complexity 1 23 0 1 754 290 143 52 0 chrX 22259574 22259651 -163176 + (TA)n Simple_repeat Simple_repeat 2 82 0 1 754 189 0 0 0 chrX 22260299 22260320 -162507 + (TATG)n Simple_repeat Simple_repeat 3 23 0 1 754 236 208 0 0 chrX 22262730 22262778 -160049 + (CTAAA)n Simple_repeat Simple_repeat 3 50 0 1 754 285 29 0 0 chrX 22263800 22263834 -158993 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 754 548 209 0 0 chrX 22263993 22264098 -158729 + T-rich Low_complexity Low_complexity 31 135 0 1 754 21 0 0 0 chrX 22267177 22267198 -155629 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 216 0 0 0 chrX 22267428 22267452 -155375 + (A)n Simple_repeat Simple_repeat 1 24 0 1 754 259 198 0 62 chrX 22268184 22268281 -154546 + ROO_I LTR Pao 639 729 -7527 1 754 23 0 0 0 chrX 22271347 22271370 -151457 + AT_rich Low_complexity Low_complexity 1 23 0 1 754 776 192 145 100 chrX 22272065 22272464 -150363 + DNAREP1_DM LINE Penelope 178 594 0 1 754 309 178 25 76 chrX 22274212 22274291 -148536 + DNAREP1_DM LINE Penelope 370 444 -150 1 754 23 0 0 0 chrX 22277160 22277183 -145644 + AT_rich Low_complexity Low_complexity 1 23 0 1 754 1968 144 162 40 chrX 22277402 22277932 -144895 - DNAREP1_DM LINE Penelope -21 573 1 1 754 23 33 0 0 chrX 22278606 22278636 -144191 + AT_rich Low_complexity Low_complexity 1 30 0 1 755 233 86 0 0 chrX 22283869 22283904 -138923 - FB4_DM DNA Tc1 -1327 2762 2728 1 755 7047 92 58 7 chrX 22283874 22284587 -138240 + FB4_DM DNA Tc1 1109 1841 -2248 1 755 191 36 36 0 chrX 22284587 22284615 -138212 + (CTAAT)n Simple_repeat Simple_repeat 4 32 0 1 755 7047 101 95 10 chrX 22284615 22285387 -137440 + FB4_DM DNA Tc1 1842 2760 -1329 1 755 23 68 0 0 chrX 22287514 22287558 -135269 + AT_rich Low_complexity Low_complexity 1 44 0 1 755 21 0 0 0 chrX 22287691 22287712 -135115 + AT_rich Low_complexity Low_complexity 1 21 0 1 755 1485 106 115 29 chrX 22287944 22288411 -134416 + PROTOP_B DNA P 2 604 -549 1 755 13537 53 66 2 chrX 22288410 22290275 -132552 - DMCR1A LINE CR1 -327 4143 2159 1 755 1923 63 46 10 chrX 22290271 22290574 -132253 + Jockey2 LINE Jockey 3083 3396 -32 1 755 3625 53 106 13 chrX 22290595 22291264 -131563 - DMCR1A LINE CR1 -2295 2175 1445 1 755 737 93 0 8 chrX 22291264 22291383 -131444 - DNAREP1_DM LINE Penelope -327 267 150 1 755 204 125 0 0 chrX 22292216 22292248 -130579 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 755 27 0 0 0 chrX 22292712 22292739 -130088 + AT_rich Low_complexity Low_complexity 1 27 0 1 755 246 120 160 0 chrX 22293331 22293381 -129446 + DNAREP1_DM LINE Penelope 537 594 0 1 755 23 68 0 0 chrX 22293386 22293430 -129397 + AT_rich Low_complexity Low_complexity 1 44 0 1 755 24 0 0 0 chrX 22293707 22293731 -129096 + AT_rich Low_complexity Low_complexity 1 24 0 1 755 237 250 0 14 chrX 22295940 22296009 -126818 - Transib5 DNA Transib 0 3001 2934 1 755 500 110 49 20 chrX 22296986 22297088 -125739 + DM297_LTR LTR Gypsy 280 384 -30 1 755 1987 106 3 15 chrX 22298137 22298474 -124353 + DNAREP1_DM LINE Penelope 2 334 -260 1 755 630 62 146 0 chrX 22298525 22298621 -124206 - DNAREP1_DM LINE Penelope -23 571 462 1 755 37 23 0 0 chrX 22298708 22298752 -124075 + AT_rich Low_complexity Low_complexity 1 44 0 1 755 550 144 126 0 chrX 22300348 22300459 -122368 + DNAREP1_DM LINE Penelope 449 573 -21 1 755 518 197 171 0 chrX 22301181 22301333 -121494 + DNAREP1_DM LINE Penelope 377 554 -40 1 755 34 0 0 0 chrX 22301349 22301383 -121444 + AT_rich Low_complexity Low_complexity 1 34 0 1 755 5277 42 86 1 chrX 22301405 22302141 -120686 + TC1_DM DNA Tc1 869 1666 0 1 755 1266 164 19 8 chrX 22303553 22303818 -119009 + DM297_LTR LTR Gypsy 131 398 -16 1 755 436 196 204 38 chrX 22303821 22304007 -118820 + DNAREP1_DM LINE Penelope 24 240 -354 1 755 324 205 106 9 chrX 22304058 22304171 -118656 + DNAREP1_DM LINE Penelope 192 315 -279 1 755 720 200 116 121 chrX 22304409 22304874 -117953 - DNAREP1_DM LINE Penelope -1 593 2 1 755 284 206 31 61 chrX 22304919 22305017 -117810 - DMRP1 Unknown Unknown -240 106 12 1 755 1378 132 193 20 chrX 22305625 22306132 -116695 + DNAREP1_DM LINE Penelope 1 594 0 1 755 233 290 0 0 chrX 22306859 22306921 -115906 + DNAREP1_DM LINE Penelope 4 65 -529 1 755 22 70 0 0 chrX 22307082 22307125 -115702 + AT_rich Low_complexity Low_complexity 1 43 0 1 755 37 23 0 0 chrX 22307158 22307202 -115625 + AT_rich Low_complexity Low_complexity 1 44 0 1 755 926 94 262 26 chrX 22307203 22307479 -115348 + DNAREP1_DM LINE Penelope 163 487 -107 1 755 541 118 0 11 chrX 22307660 22307754 -115073 + DNAREP1_DM LINE Penelope 482 574 -20 1 755 254 211 0 0 chrX 22308335 22308387 -114440 - DNAREP1_DM LINE Penelope -542 52 1 1 755 480 77 0 0 chrX 22308503 22308568 -114259 + Transib-N1_DM DNA Transib 1 65 -449 1 755 2710 45 87 68 chrX 22308679 22309137 -113690 - TRANSIB3 DNA Transib -26 2857 2391 1 755 9163 36 20 29 chrX 22309145 22310413 -112414 - TRANSIB3 DNA Transib -1577 1306 51 1 755 1526 80 0 63 chrX 22310553 22310821 -112006 - Gypsy7_LTR LTR Gypsy 0 251 1 1 755 2349 0 0 4 chrX 22310853 22311129 -111698 - BURDOCK_LTR LTR Gypsy 0 275 1 1 755 9785 0 1 1 chrX 22311130 22312265 -110562 - BURDOCK_I LTR Gypsy 0 5860 4726 1 755 21527 2 0 0 chrX 22312255 22314745 -108082 - BURDOCK_I LTR Gypsy -3370 2490 1 1 755 2349 0 0 4 chrX 22314745 22315021 -107806 - BURDOCK_LTR LTR Gypsy 0 275 1 1 755 376 135 14 0 chrX 22315090 22315164 -107663 + Transib-N1_DM DNA Transib 41 115 -399 1 755 2075 92 9 15 chrX 22315313 22315646 -107181 + Transib-N1_DM DNA Transib 129 459 -55 1 755 246 123 105 0 chrX 22315647 22315704 -107123 - PROTOP DNA P -510 3970 3908 1 755 1741 106 194 7 chrX 22315690 22316226 -106601 - PROTOP DNA P -3439 1041 404 1 755 760 195 0 75 chrX 22318724 22318924 -103903 + DNAREP1_DM LINE Penelope 20 204 -390 1 755 21 71 0 0 chrX 22319302 22319344 -103483 + AT_rich Low_complexity Low_complexity 1 42 0 1 755 2134 81 125 6 chrX 22319599 22319936 -102891 - PROTOP DNA P -4102 378 1 1 755 406 0 56 28 chrX 22322855 22322926 -99901 + (TAAA)n Simple_repeat Simple_repeat 4 76 0 1 755 256 214 18 0 chrX 22323115 22323171 -99656 - DNAREP1_DM LINE Penelope -537 57 1 1 755 206 291 18 0 chrX 22324675 22324730 -98097 + (CTG)n Simple_repeat Simple_repeat 3 58 0 1 755 1839 141 85 47 chrX 22325620 22326087 -96740 + DNAREP1_DM LINE Penelope 20 594 0 1 755 1431 85 60 0 chrX 22326087 22326287 -96540 - PROTOP_B DNA P -941 212 1 1 755 780 141 104 0 chrX 22326287 22326420 -96407 + DNAREP1_DM LINE Penelope 448 594 0 1 755 2396 65 73 3 chrX 22326609 22326978 -95849 - TC1-2_DM DNA Tc1 0 1644 1250 1 755 3287 36 43 7 chrX 22326967 22327384 -95443 - TC1-2_DM DNA Tc1 -504 1140 709 1 755 3449 80 18 6 chrX 22327382 22327884 -94943 - TC1-2_DM DNA Tc1 -1136 508 1 1 755 824 77 53 8 chrX 22327893 22328024 -94803 - DM297_LTR LTR Gypsy 0 414 278 1 755 304 234 71 63 chrX 22329925 22330080 -92747 - G2_DM LINE Jockey -1251 1851 1737 1 755 1071 89 143 0 chrX 22331878 22332046 -90781 + DNAREP1_DM LINE Penelope 403 594 0 1 755 455 232 42 7 chrX 22331919 22332062 -90765 - P_DG DNA P -3 2885 2738 1 755 532 166 0 2 chrX 22332554 22332654 -90173 + DNAREP1_DM LINE Penelope 506 593 -1 1 755 536 96 0 0 chrX 22332655 22332728 -90099 + DMTOM1_LTR LTR Gypsy 1 73 -337 1 755 1168 85 0 0 chrX 22332727 22332891 -89936 + DMTOM1_LTR LTR Gypsy 247 410 0 1 755 753 96 0 0 chrX 22332921 22333025 -89802 + DNAREP1_DM LINE Penelope 15 118 -476 1 755 2134 85 140 3 chrX 22333029 22333371 -89456 - BS3_DM LINE Jockey 0 1790 1402 1 755 332 59 98 0 chrX 22333477 22333528 -89299 - DNAREP1_DM LINE Penelope -39 555 500 1 755 802 83 271 5 chrX 22333528 22333731 -89096 - DNAREP1_DM LINE Penelope -298 296 40 1 755 247 378 6 6 chrX 22333805 22333986 -88841 - TC1_DM DNA Tc1 -940 726 546 1 755 629 71 82 0 chrX 22334002 22334100 -88727 + Transib-N1_DM DNA Transib 1 106 -408 1 755 3983 56 8 0 chrX 22334112 22334609 -88218 - BS3_DM LINE Jockey -265 1525 1025 1 755 456 204 96 10 chrX 22334699 22334803 -88024 - BS2 LINE Jockey -2695 2026 1914 1 755 4781 121 18 1 chrX 22334796 22335525 -87302 - BS2 LINE Jockey -3076 1645 905 1 755 234 0 0 0 chrX 22336200 22336226 -86601 + (T)n Simple_repeat Simple_repeat 1 26 0 1 755 596 196 251 0 chrX 22336895 22337074 -85753 - DMCR1A LINE CR1 -1080 3390 3167 1 755 707 93 317 6 chrX 22337085 22337265 -85562 - DMCR1A LINE CR1 -1782 2688 2453 1 755 1514 116 0 0 chrX 22337281 22337506 -85321 - DMCR1A LINE CR1 -2341 2129 1905 1 755 243 0 0 0 chrX 22337512 22337539 -85288 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 755 46 33 0 0 chrX 22337539 22337599 -85228 + AT_rich Low_complexity Low_complexity 1 60 0 1 755 776 201 208 0 chrX 22337605 22337825 -85002 - DMCR1A LINE CR1 -2580 1890 1625 1 755 307 174 0 131 chrX 22337837 22337936 -84891 - DMCR1A LINE CR1 -2973 1497 1412 1 755 229 135 0 0 chrX 22337950 22337987 -84840 - PROTOP_B DNA P -621 532 496 1 755 1146 176 55 55 chrX 22338024 22338383 -84444 - DNAREP1_DM LINE Penelope -1 593 117 1 755 2065 95 38 32 chrX 22339245 22339592 -83235 - Transib-N1_DM DNA Transib 0 514 166 1 755 332 23 0 23 chrX 22339654 22339698 -83129 - Transib-N1_DM DNA Transib -471 43 1 1 755 945 184 85 23 chrX 22339805 22340230 -82597 - DNAREP1_DM LINE Penelope -236 358 32 1 755 981 114 47 12 chrX 22340389 22340558 -82269 + DNAREP1_DM LINE Penelope 1 175 -419 1 755 2494 64 220 10 chrX 22340711 22341111 -81716 - DMCR1A LINE CR1 0 4470 3987 1 755 7922 48 25 0 chrX 22341125 22342798 -80029 - DMCR1A LINE CR1 -598 3872 2159 1 755 2066 57 46 10 chrX 22342794 22343097 -79730 + Jockey2 LINE Jockey 3083 3396 -32 1 755 14805 62 75 17 chrX 22343118 22345168 -77659 - DMCR1A LINE CR1 -2295 2175 7 1 755 628 72 12 0 chrX 22346475 22346558 -76269 + DNAREP1_DM LINE Penelope 511 594 0 1 755 478 169 0 0 chrX 22346707 22346784 -76043 + DNAREP1_DM LINE Penelope 367 443 -151 1 755 1025 88 82 0 chrX 22346791 22346938 -75889 + PROTOP_B DNA P 1 159 -994 1 755 639 103 0 0 chrX 22348126 22348233 -74594 - TC1-2_DM DNA Tc1 -4 1640 1534 1 755 258 136 0 0 chrX 22348235 22348279 -74548 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 755 2535 98 75 8 chrX 22348279 22348681 -74146 - TC1-2_DM DNA Tc1 -187 1457 1029 1 755 662 93 31 0 chrX 22348682 22348779 -74048 - DM297_LTR LTR Gypsy -314 100 1 1 755 4370 78 62 15 chrX 22348779 22349492 -73335 - DM297_I LTR Gypsy 0 6167 5422 1 755 14203 75 67 36 chrX 22349489 22351709 -71118 - DM297_I LTR Gypsy -1389 4778 2492 1 755 13879 65 86 20 chrX 22351713 22353753 -69074 + DMCR1A LINE CR1 1 2175 -2295 1 755 2165 58 55 9 chrX 22353754 22354084 -68743 - Jockey2 LINE Jockey -1 3427 3083 1 755 8883 50 50 0 chrX 22354080 22355983 -66844 + DMCR1A LINE CR1 2159 4157 -313 1 755 1407 78 11 0 chrX 22355981 22356172 -66655 + DMCR1A LINE CR1 4277 4469 -1 1 755 699 74 0 0 chrX 22356171 22356266 -66561 - DM297_I LTR Gypsy -3678 2489 2395 1 755 5992 83 107 36 chrX 22356259 22357934 -64893 - DM297_I LTR Gypsy -4283 1884 1 1 755 2406 106 16 53 chrX 22357934 22358364 -64463 - DM297_LTR LTR Gypsy 0 414 1 1 755 581 185 146 18 chrX 22359452 22359617 -63210 + DNAREP1_DM LINE Penelope 147 332 -262 1 755 592 73 0 0 chrX 22359594 22359676 -63151 + DNAREP1_DM LINE Penelope 182 263 -331 1 755 601 121 0 11 chrX 22359725 22359817 -63010 - DNAREP1_DM LINE Penelope 0 594 504 1 755 446 172 133 0 chrX 22359812 22359940 -62887 - DNAREP1_DM LINE Penelope -449 145 1 1 755 485 189 42 0 chrX 22361100 22361195 -61632 + DNAREP1_DM LINE Penelope 348 446 -148 1 755 23 33 0 0 chrX 22364378 22364408 -58419 + AT_rich Low_complexity Low_complexity 1 30 0 1 755 339 307 87 0 chrX 22364576 22364726 -58101 - DNAREP1_DM LINE Penelope -4 590 428 1 755 204 40 0 0 chrX 22366144 22366169 -56658 + (ACTCG)n Simple_repeat Simple_repeat 4 28 0 1 755 1290 153 305 11 chrX 22367826 22368285 -54542 + DNAREP1_DM LINE Penelope 1 594 0 1 755 37 69 0 0 chrX 22370559 22370631 -52196 + AT_rich Low_complexity Low_complexity 1 72 0 1 755 3641 100 37 2 chrX 22370636 22371209 -51618 + DNAREP1_DM LINE Penelope 2 594 0 1 755 29 60 0 0 chrX 22371209 22371259 -51568 + AT_rich Low_complexity Low_complexity 1 50 0 1 755 22 35 0 0 chrX 22371370 22371399 -51428 + AT_rich Low_complexity Low_complexity 1 29 0 1 755 1658 102 320 6 chrX 22371492 22371840 -50987 - DM297_LTR LTR Gypsy 0 414 1 1 755 4231 80 62 7 chrX 22371840 22372547 -50280 - DM297_I LTR Gypsy 0 6167 5422 1 755 6055 76 72 72 chrX 22372544 22373628 -49199 - DM297_I LTR Gypsy -1389 4778 3695 1 755 2768 53 0 0 chrX 22373628 22373989 -48838 - BEL_LTR LTR Pao 0 361 1 1 755 7274 23 0 3 chrX 22373989 22374865 -47962 - BEL_I LTR Pao 0 5404 4532 1 755 10631 16 115 0 chrX 22374877 22376437 -46390 - BEL_I LTR Pao -961 4443 2705 1 755 1225 44 57 0 chrX 22376436 22376594 -46233 + DMCR1A LINE CR1 1272 1438 -3032 1 755 2272 50 237 20 chrX 22376596 22377046 -45781 + DMCR1A LINE CR1 1628 2175 -2295 1 755 2053 58 55 9 chrX 22377050 22377379 -45448 - Jockey2 LINE Jockey -2 3426 3083 1 755 9014 48 50 0 chrX 22377375 22379278 -43549 + DMCR1A LINE CR1 2159 4157 -313 1 755 1336 78 11 0 chrX 22379276 22379467 -43360 + DMCR1A LINE CR1 4277 4469 -1 1 755 627 85 0 0 chrX 22379468 22379562 -43265 - DM297_I LTR Gypsy -3679 2488 2395 1 755 5108 87 67 40 chrX 22379553 22380975 -41852 - DM297_I LTR Gypsy -4281 1886 340 1 755 426 63 0 73 chrX 22381034 22381102 -41725 - DM297_LTR LTR Gypsy -351 63 1 1 755 1571 187 13 76 chrX 22381115 22381588 -41239 - DM176_LTR LTR Gypsy 0 507 1 1 755 22 0 0 0 chrX 22382809 22382831 -39996 + AT_rich Low_complexity Low_complexity 1 22 0 1 755 24 53 0 0 chrX 22383207 22383245 -39582 + AT_rich Low_complexity Low_complexity 1 38 0 1 755 321 216 0 138 chrX 22385510 22385655 -37172 + DNAREP1_DM LINE Penelope 388 512 -82 1 755 767 83 0 0 chrX 22385736 22385844 -36983 + DNAREP1_DM LINE Penelope 1 108 -486 1 755 1429 119 220 3 chrX 22385843 22386139 -36688 - DNAREP1_DM LINE Penelope -234 360 1 1 755 1123 76 122 21 chrX 22388449 22388638 -34189 - DNAREP1_DM LINE Penelope -1 593 386 1 755 999 116 11 17 chrX 22388639 22388815 -34012 - DNAREP1_DM LINE Penelope -419 175 1 1 755 25 0 0 0 chrX 22388919 22388944 -33883 + AT_rich Low_complexity Low_complexity 1 25 0 1 755 2323 4 0 4 chrX 22388993 22389269 -33558 + BURDOCK_LTR LTR Gypsy 1 275 0 1 755 6782 5 0 0 chrX 22389269 22390073 -32754 + BURDOCK_I LTR Gypsy 1 804 -5056 1 755 10782 0 1 2 chrX 22390064 22391318 -31509 + BURDOCK_I LTR Gypsy 4608 5860 0 1 755 2349 0 0 4 chrX 22391319 22391595 -31232 + BURDOCK_LTR LTR Gypsy 1 275 0 1 755 216 67 0 0 chrX 22393847 22393877 -28950 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 755 438 189 62 16 chrX 22395898 22396027 -26800 + DNAREP1_DM LINE Penelope 1 135 -459 1 755 3752 2 0 0 chrX 22398198 22398626 -24201 + ROO_LTR LTR Pao 1 428 0 1 755 29810 1 5 0 chrX 22398626 22402137 -20690 + ROO_I LTR Pao 1 3526 -4730 1 755 24051 0 0 0 chrX 22402130 22404946 -17881 + ROO_I LTR Pao 5440 8256 0 1 755 3736 5 0 0 chrX 22404946 22405374 -17453 + ROO_LTR LTR Pao 1 428 0 1 755 480 203 39 15 chrX 22406722 22406852 -15975 + DNAREP1_DM LINE Penelope 1 133 -461 1 755 641 105 0 0 chrX 22406913 22407008 -15819 + DNAREP1_DM LINE Penelope 500 594 0 1 755 404 85 0 0 chrX 22407208 22407267 -15560 - DNAREP1_DM LINE Penelope 0 594 536 1 755 26 0 0 0 chrX 22407291 22407317 -15510 + AT_rich Low_complexity Low_complexity 1 26 0 1 755 783 50 0 0 chrX 22407329 22407428 -15399 + TRANSIB2 DNA Transib 159 257 -2587 1 755 209 57 0 28 chrX 22407428 22407464 -15363 + (TTA)n Simple_repeat Simple_repeat 3 37 0 1 755 28 29 0 0 chrX 22407464 22407499 -15328 + AT_rich Low_complexity Low_complexity 1 35 0 1 755 2675 42 103 4 chrX 22407499 22408195 -14632 + TRANSIB2 DNA Transib 254 1018 -1826 1 755 2194 25 39 0 chrX 22408209 22408489 -14338 + TRANSIB2 DNA Transib 1177 1467 -1377 1 755 1793 38 36 47 chrX 22408492 22408769 -14058 + TRANSIB2 DNA Transib 2571 2844 0 1 755 27 0 0 0 chrX 22409349 22409376 -13451 + AT_rich Low_complexity Low_complexity 1 27 0 1 94 1139 164 160 80 chrX 22413077 22413563 -9264 + DNAREP1_DM LINE Penelope 70 594 0 1 756 21 0 0 0 chrX 22414036 22414057 -8770 + AT_rich Low_complexity Low_complexity 1 21 0 1 756 13494 30 2 1 chrX 22418586 22420250 -2577 + TC1_DM DNA Tc1 1 1666 0 1 756 648 138 81 0 chrX 22420462 22420585 -2242 + DNAREP1_DM LINE Penelope 1 133 -461 1 756 1577 98 53 34 chrX 22420587 22420851 -1976 + DNAREP1_DM LINE Penelope 326 594 0 1 756 307 131 33 0 chrX 22420859 22420920 -1907 + DNAREP1_DM LINE Penelope 270 332 -262 1 756 45 75 0 0 chrX 22421075 22421169 -1658 + AT_rich Low_complexity Low_complexity 1 94 0 1 756 26 0 0 0 chrX 22421268 22421294 -1533 + AT_rich Low_complexity Low_complexity 1 26 0 1 756 1620 6 0 0 chrX 22422287 22422825 -2 + (TAGA)n Simple_repeat Simple_repeat 1 538 0 1 585 27 73 0 0 chrYHet 1197 1252 -345786 + AT_rich Low_complexity Low_complexity 1 55 0 1 585 46 19 0 0 chrYHet 3188 3241 -343797 + AT_rich Low_complexity Low_complexity 1 53 0 1 585 25 0 0 0 chrYHet 3394 3419 -343619 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 802 31 30 15 chrYHet 3462 3594 -343444 + S2_DM DNA Tc1 1 134 -1601 1 585 536 85 38 0 chrYHet 3588 3694 -343344 + S2_DM DNA Tc1 1523 1632 -103 1 585 685 328 0 10 chrYHet 4273 4578 -342460 + DM1731_I LTR Copia 1455 1756 -2220 1 585 1440 0 0 0 chrYHet 4586 4746 -342292 + (TTCTC)n Simple_repeat Simple_repeat 2 161 0 1 585 1114 307 37 9 chrYHet 4902 5470 -341568 + HMSBEAGLE_I LTR Gypsy 5189 5772 -757 1 585 3718 37 16 16 chrYHet 13267 13762 -333276 - DMRT1B LINE R1 -1506 3677 3183 1 585 2924 78 29 0 chrYHet 13897 14305 -332733 - Gypsy6A_LTR LTR Gypsy 0 420 1 1 585 574 300 83 20 chrYHet 14312 14564 -332474 - Gypsy6_I LTR Gypsy -5 7007 6740 1 585 739 99 9 0 chrYHet 14894 15005 -332033 + DNAREP1_DM LINE Penelope 1 112 -482 1 585 25 0 0 0 chrYHet 15311 15336 -331702 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 25 65 0 0 chrYHet 20362 20408 -326630 + AT_rich Low_complexity Low_complexity 1 46 0 1 585 718 129 0 119 chrYHet 23520 23705 -323333 + Gypsy8_LTR LTR Gypsy 1 163 -141 1 585 452 177 219 51 chrYHet 23729 23925 -323113 + Gypsy8_I LTR Gypsy 1 229 -4118 1 585 1349 150 114 7 chrYHet 24460 24768 -322270 + Gypsy8_I LTR Gypsy 2261 2601 -1746 1 585 782 104 0 0 chrYHet 24979 25094 -321944 + DMRT1B LINE R1 1 115 -5068 1 585 189 0 0 0 chrYHet 25094 25115 -321923 + (TTTAA)n Simple_repeat Simple_repeat 2 22 0 1 585 12077 123 79 1 chrYHet 25168 27842 -319196 + DMRT1B LINE R1 623 3563 -1620 1 585 5800 161 86 2 chrYHet 27836 29087 -317951 + DMRT1B LINE R1 3774 5167 -16 1 585 2578 136 145 58 chrYHet 29086 29774 -317264 + Gypsy8_I LTR Gypsy 2582 3329 -1018 1 585 21 36 0 0 chrYHet 31951 31979 -315059 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 429 219 7 21 chrYHet 32746 32886 -314152 + DNAREP1_DM LINE Penelope 127 264 -330 1 585 397 163 141 0 chrYHet 32935 33027 -314011 + DNAREP1_DM LINE Penelope 137 241 -353 1 585 260 53 0 50 chrYHet 33084 33124 -313914 - DNAREP1_DM LINE Penelope -551 43 6 1 585 274 198 62 0 chrYHet 33523 33604 -313434 - Gypsy8_LTR LTR Gypsy -117 187 102 1 585 22 99 0 0 chrYHet 37304 37375 -309663 + AT_rich Low_complexity Low_complexity 1 71 0 1 585 342 112 247 12 chrYHet 38793 38874 -308164 + DNAREP1_DM LINE Penelope 456 555 -39 1 585 26 50 0 0 chrYHet 38994 39034 -308004 + AT_rich Low_complexity Low_complexity 1 40 0 1 585 1711 66 271 0 chrYHet 39403 39793 -307245 - IDEFIX_LTR LTR Gypsy 0 594 99 1 585 1274 101 5 0 chrYHet 39792 40001 -307037 - IDEFIX_I LTR Gypsy -160 5468 5259 1 585 1828 47 8 4 chrYHet 40102 40339 -306699 + STALKER4_LTR LTR Gypsy 142 379 -23 1 585 273 167 0 0 chrYHet 40465 40519 -306519 - Copia_I LTR Copia -3140 1453 1400 1 585 954 298 36 40 chrYHet 41244 41799 -305239 - Copia_I LTR Copia -3885 708 156 1 585 25 75 0 0 chrYHet 42016 42069 -304969 + AT_rich Low_complexity Low_complexity 1 53 0 1 585 24 0 0 0 chrYHet 42129 42153 -304885 + AT_rich Low_complexity Low_complexity 1 24 0 1 585 252 232 14 0 chrYHet 42535 42604 -304434 - Copia_I LTR Copia -95 4498 4429 1 585 1590 264 92 41 chrYHet 42700 43563 -303475 - Copia_I LTR Copia -197 4396 3490 1 585 700 53 0 0 chrYHet 43561 43656 -303382 - DMTOM1_LTR LTR Gypsy -84 326 232 1 585 1866 282 13 12 chrYHet 43742 44488 -302550 - Copia_I LTR Copia -2314 2279 1533 1 585 2952 42 5 0 chrYHet 44513 44890 -302148 + STALKER4_LTR LTR Gypsy 1 379 -23 1 585 27 0 0 0 chrYHet 52994 53021 -294017 + AT_rich Low_complexity Low_complexity 1 27 0 1 585 7529 70 89 7 chrYHet 55132 57053 -289985 + TRANSIB2 DNA Transib 22 2100 -744 1 585 960 72 45 4 chrYHet 57046 57239 -289799 + TRANSIB2 DNA Transib 2323 2559 -285 1 585 1026 85 13 0 chrYHet 57239 57392 -289646 - Copia2_LTR_DM LTR Copia -3 195 41 1 585 8152 62 34 3 chrYHet 57405 58536 -288502 - Copia2_I LTR Copia 0 4162 2998 1 585 636 76 0 0 chrYHet 58536 58628 -288410 + IDEFIX_LTR LTR Gypsy 1 92 -502 1 585 1178 45 6 6 chrYHet 58641 58798 -288240 + IDEFIX_LTR LTR Gypsy 154 310 -284 1 585 395 80 0 13 chrYHet 58789 58865 -288173 + IDEFIX_LTR LTR Gypsy 520 594 0 1 585 26 30 0 0 chrYHet 59050 59083 -287955 + AT_rich Low_complexity Low_complexity 1 33 0 1 585 9724 77 69 22 chrYHet 59232 60713 -286325 + IDEFIX_I LTR Gypsy 175 1724 -3904 1 585 6245 69 120 8 chrYHet 60714 61749 -285289 + IDEFIX_I LTR Gypsy 1831 2980 -2648 1 585 5112 14 2 0 chrYHet 61746 62334 -284704 + DMRT1B LINE R1 2589 3177 -2006 1 585 551 0 124 12 chrYHet 62443 62604 -284434 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 585 551 5 129 5 chrYHet 66070 66482 -280556 + (TA)n Simple_repeat Simple_repeat 1 463 0 1 585 336 316 20 71 chrYHet 67034 67286 -279752 - CIRCE LINE Composite -3403 2953 2715 1 585 2428 91 3 0 chrYHet 67506 67845 -279193 - Invader5_LTR LTR Gypsy -12 340 1 1 585 429 201 127 19 chrYHet 67846 68003 -279035 - Invader5_I LTR Gypsy -11 3323 3150 1 585 487 160 40 10 chrYHet 68006 68107 -278931 - PROTOP DNA P -88 4392 4286 1 585 860 117 293 62 chrYHet 68588 68844 -278194 + DMCR1A LINE CR1 9 323 -4147 1 585 16819 35 51 8 chrYHet 68881 71054 -275984 - TRANSIB3 DNA Transib -2 2881 615 1 585 2678 82 235 15 chrYHet 71058 71750 -275288 + DMCR1A LINE CR1 412 1314 -3156 1 585 2788 39 0 0 chrYHet 71750 72086 -274952 + DM1731_LTR LTR Copia 1 336 0 1 585 34666 9 12 1 chrYHet 72086 76019 -271019 + DM1731_I LTR Copia 1 3976 0 1 585 2788 39 0 0 chrYHet 76019 76355 -270683 + DM1731_LTR LTR Copia 1 336 0 1 585 1879 76 72 11 chrYHet 76355 76633 -270405 + DMCR1A LINE CR1 1310 1604 -2866 1 585 1314 114 80 9 chrYHet 76645 76963 -270075 - PROTOP_A DNA P -175 930 689 1 585 441 91 0 0 chrYHet 76967 77033 -270005 - PROTOP DNA P -3406 1074 1009 1 585 1277 73 162 102 chrYHet 77034 77337 -269701 - PROTOP DNA P -3773 707 385 1 585 403 61 0 0 chrYHet 77330 77379 -269659 + G3_DM LINE Jockey 3672 3720 -885 1 585 754 67 0 9 chrYHet 77377 77482 -269556 + G3_DM LINE Jockey 4036 4139 -466 1 585 287 30 0 0 chrYHet 77490 77523 -269515 - PROTOP DNA P -4265 215 183 1 585 23 33 0 0 chrYHet 77547 77577 -269461 + AT_rich Low_complexity Low_complexity 1 30 0 1 585 936 52 187 0 chrYHet 78209 78343 -268695 - DMCR1A LINE CR1 -820 3650 3492 1 585 10731 39 51 0 chrYHet 78366 79711 -267327 - DMCR1A LINE CR1 -1754 2716 1304 1 585 5753 45 82 0 chrYHet 79706 80691 -266347 - DMCR1A LINE CR1 -3403 1067 1 1 585 35 0 0 0 chrYHet 81166 81201 -265837 + AT_rich Low_complexity Low_complexity 1 35 0 1 585 5260 36 42 0 chrYHet 83458 84099 -262939 - DMCR1A LINE CR1 -2499 1971 1304 1 585 574 30 0 0 chrYHet 84094 84160 -262878 - DMCR1A LINE CR1 -3403 1067 1002 1 585 47 0 0 0 chrYHet 84744 84791 -262247 + AT_rich Low_complexity Low_complexity 1 47 0 1 585 5627 84 41 1 chrYHet 85189 85949 -261089 - Gypsy12_I LTR Gypsy -638 4908 4119 1 585 3045 115 0 0 chrYHet 85949 86374 -260664 - Gypsy12_I LTR Gypsy -1536 4010 3586 1 585 7156 107 3 3 chrYHet 86357 87367 -259671 - Gypsy12_I LTR Gypsy -2578 2968 1959 1 585 3604 110 17 25 chrYHet 87376 87964 -259074 - Gypsy12_I LTR Gypsy -4963 583 1 1 585 2947 132 13 46 chrYHet 87964 88486 -258552 - Gypsy12_LTR LTR Gypsy 0 2336 1833 1 585 3329 41 31 0 chrYHet 88486 88899 -258139 - ROO_LTR LTR Pao 0 428 3 1 585 2338 61 63 16 chrYHet 88903 89269 -257769 - ROO_I LTR Pao 0 8256 7874 1 585 1781 220 32 52 chrYHet 89221 89720 -257318 - Gypsy12_LTR LTR Gypsy -1762 574 86 1 585 32 0 0 0 chrYHet 89736 89768 -257270 + AT_rich Low_complexity Low_complexity 1 32 0 1 585 5649 83 41 1 chrYHet 90208 90968 -256070 - Gypsy12_I LTR Gypsy -638 4908 4119 1 585 3034 118 0 0 chrYHet 90968 91393 -255645 - Gypsy12_I LTR Gypsy -1536 4010 3586 1 585 7165 106 3 3 chrYHet 91376 92386 -254652 - Gypsy12_I LTR Gypsy -2578 2968 1959 1 585 3604 110 17 25 chrYHet 92395 92983 -254055 - Gypsy12_I LTR Gypsy -4963 583 1 1 585 2904 136 13 46 chrYHet 92983 93505 -253533 - Gypsy12_LTR LTR Gypsy 0 2336 1833 1 585 3329 41 31 0 chrYHet 93505 93918 -253120 - ROO_LTR LTR Pao 0 428 3 1 585 2348 64 60 16 chrYHet 93922 94289 -252749 - ROO_I LTR Pao 0 8256 7874 1 585 1852 215 30 50 chrYHet 94241 94740 -252298 - Gypsy12_LTR LTR Gypsy -1762 574 86 1 585 32 0 0 0 chrYHet 94756 94788 -252250 + AT_rich Low_complexity Low_complexity 1 32 0 1 585 29 70 0 0 chrYHet 95360 95417 -251621 + AT_rich Low_complexity Low_complexity 1 57 0 1 585 25 0 0 0 chrYHet 96646 96671 -250367 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 205 51 51 0 chrYHet 96872 96911 -250127 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 585 21 0 0 0 chrYHet 97134 97155 -249883 + AT_rich Low_complexity Low_complexity 1 21 0 1 585 25 0 0 0 chrYHet 97527 97552 -249486 + AT_rich Low_complexity Low_complexity 1 25 0 1 585 229 234 71 47 chrYHet 98100 98185 -248853 - Gypsy6_I LTR Gypsy -2298 4714 4628 1 585 21 36 0 0 chrYHet 98403 98431 -248607 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 1119 35 93 0 chrYHet 98653 98825 -248213 - TLD2 Unknown Unknown -30 188 1 1 585 678 325 47 25 chrYHet 98759 99248 -247790 - BURDOCK_I LTR Gypsy -3072 2788 2289 1 585 21 36 0 0 chrYHet 99356 99384 -247654 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 313 306 36 80 chrYHet 100366 100621 -246417 - Gypsy3_I LTR Gypsy -4806 1371 1171 1 585 3435 34 146 1 chrYHet 100823 101997 -245041 - DMCR1A LINE CR1 0 4470 3127 1 585 5622 20 51 0 chrYHet 101997 103048 -243990 + PROTOP_A DNA P 1 1105 0 1 585 14229 41 37 1 chrYHet 103048 104814 -242224 - DMCR1A LINE CR1 -1337 3133 1304 1 585 574 30 0 0 chrYHet 104809 104875 -242163 - DMCR1A LINE CR1 -3403 1067 1002 1 585 47 0 0 0 chrYHet 105459 105506 -241532 + AT_rich Low_complexity Low_complexity 1 47 0 1 585 5627 84 41 1 chrYHet 105904 106664 -240374 - Gypsy12_I LTR Gypsy -638 4908 4119 1 585 3045 115 0 0 chrYHet 106664 107089 -239949 - Gypsy12_I LTR Gypsy -1536 4010 3586 1 585 7158 106 3 3 chrYHet 107072 108082 -238956 - Gypsy12_I LTR Gypsy -2578 2968 1959 1 585 3604 110 17 25 chrYHet 108091 108679 -238359 - Gypsy12_I LTR Gypsy -4963 583 1 1 585 6903 191 53 61 chrYHet 108679 110572 -236466 - Gypsy12_LTR LTR Gypsy 0 2336 460 1 585 232 196 0 0 chrYHet 110835 110881 -236157 - TV1I LTR Gypsy -2103 3860 3815 1 585 936 149 46 8 chrYHet 111025 111263 -235775 - DNAREP1_DM LINE Penelope -151 443 70 1 585 227 122 0 0 chrYHet 111454 111495 -235543 - TV1I LTR Gypsy -3316 2647 2607 1 585 467 225 146 36 chrYHet 111645 111855 -235183 - TV1I LTR Gypsy -3676 2287 2163 1 585 624 145 22 12 chrYHet 112795 112962 -234076 + DNAREP1_DM LINE Penelope 117 332 -262 1 585 679 183 126 16 chrYHet 113571 113754 -233284 - DM297_I LTR Gypsy -2597 3570 3368 1 585 1099 144 43 0 chrYHet 113791 113979 -233059 - DM297_I LTR Gypsy -3428 2739 2544 1 585 3083 231 3 3 chrYHet 114080 114722 -232316 + Gypsy6_I LTR Gypsy 4677 5318 -1694 1 585 22 0 0 0 chrYHet 114731 114753 -232285 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 1798 245 2 7 chrYHet 114784 115219 -231819 + Gypsy2_I LTR Gypsy 5074 5506 -629 1 585 3366 52 0 0 chrYHet 117219 117642 -229396 + MDG1_I LTR Gypsy 5173 5595 -1001 1 585 1006 31 0 0 chrYHet 117639 117768 -229270 + Invader2_I LTR Gypsy 4377 4505 -87 1 585 48 0 0 0 chrYHet 117768 117816 -229222 + AT_rich Low_complexity Low_complexity 1 48 0 1 585 1436 28 6 0 chrYHet 117820 118002 -229036 - TRANSIB2 DNA Transib -2661 183 1 1 585 1300 82 39 0 chrYHet 118002 118182 -228856 - ROOA_I LTR Pao -1786 5063 4877 1 585 6553 62 135 4 chrYHet 118184 119149 -227889 - ROOA_I LTR Pao -2147 4702 3612 1 585 14913 47 67 42 chrYHet 119149 121302 -225736 - ROOA_I LTR Pao -4121 2728 522 1 585 1685 39 0 0 chrYHet 121303 121506 -225532 - ROOA_I LTR Pao -6603 246 44 1 585 2802 66 3 0 chrYHet 121503 121865 -225173 - ROOA_LTR LTR Pao -23 363 1 1 585 400 111 63 0 chrYHet 121865 121928 -225110 - DNAREP1_DM LINE Penelope -489 105 39 1 585 22 0 0 0 chrYHet 123114 123136 -223902 + AT_rich Low_complexity Low_complexity 1 22 0 1 585 28 0 0 0 chrYHet 123214 123242 -223796 + AT_rich Low_complexity Low_complexity 1 28 0 1 585 422 82 89 49 chrYHet 123326 123449 -223589 - DNAREP1_DM LINE Penelope -1 593 427 1 585 2233 68 107 9 chrYHet 123443 123771 -223267 - Mariner2_DM DNA Tc1 -4 908 549 1 585 519 33 0 0 chrYHet 123777 123837 -223201 - Mariner2_DM DNA Tc1 -817 95 36 1 585 1053 220 23 129 chrYHet 123961 124348 -222690 - ZAM_LTR LTR Gypsy -122 350 5 1 585 1270 118 518 0 chrYHet 124359 124615 -222423 - FW_DM LINE Jockey -936 3756 3368 1 585 583 200 0 0 chrYHet 124617 124732 -222306 - FW_DM LINE Jockey -1513 3179 3065 1 585 551 119 0 0 chrYHet 124712 124796 -222242 - FW_DM LINE Jockey -1847 2845 2762 1 585 1037 139 23 0 chrYHet 124794 124967 -222071 - FW_DM LINE Jockey -2500 2192 2016 1 585 413 103 0 29 chrYHet 124985 125055 -221983 - FW_DM LINE Jockey -4528 164 97 1 585 1144 142 186 0 chrYHet 125128 125354 -221684 + DM176_I LTR Gypsy 4362 4629 -1791 1 585 596 166 234 0 chrYHet 125355 125534 -221504 + DM176_I LTR Gypsy 4793 5013 -1407 1 585 276 165 148 0 chrYHet 125533 125616 -221422 + DM176_I LTR Gypsy 5318 5419 -1001 1 586 5503 3 0 14 chrYHet 132617 133242 -213796 - DOC LINE Jockey -4078 647 32 1 586 11589 8 1 0 chrYHet 133272 134604 -212434 - DM176_I LTR Gypsy -3453 2967 1635 1 586 1678 0 0 0 chrYHet 134704 134894 -212144 - NOMAD_LTR LTR Gypsy -328 190 1 1 586 924 119 108 44 chrYHet 134896 134989 -212049 - Gypsy11_LTR LTR Gypsy -192 260 163 1 586 180 0 0 0 chrYHet 134989 135009 -212029 + (TATG)n Simple_repeat Simple_repeat 3 22 0 1 586 924 120 99 41 chrYHet 135009 135128 -211910 - Gypsy11_LTR LTR Gypsy -290 162 1 1 586 504 161 36 0 chrYHet 135138 135250 -211788 - DNAREP1_DM LINE Penelope -414 180 65 1 586 234 163 0 75 chrYHet 135978 136031 -211007 - DNAREP1_DM LINE Penelope -145 449 401 1 586 2527 41 209 0 chrYHet 136130 136646 -210392 + PROTOP_B DNA P 1 623 -530 1 586 3113 32 0 0 chrYHet 136646 137018 -210020 + Stalker3_LTR LTR Gypsy 1 372 0 1 586 1620 0 0 0 chrYHet 137148 137466 -209572 + (TCTTG)n Simple_repeat Simple_repeat 1 318 0 1 586 276 123 13 40 chrYHet 137466 137542 -209496 + G7_DM LINE Jockey 1112 1185 -7 1 586 245 252 83 35 chrYHet 137829 137973 -209065 - QUASIMODO_I LTR Gypsy -1040 5020 4870 1 586 851 165 149 10 chrYHet 137979 138187 -208851 - DNAREP1_DM LINE Penelope 0 594 358 1 586 542 118 0 12 chrYHet 138271 138357 -208681 - DNAREP1_DM LINE Penelope -485 109 25 1 586 21 36 0 0 chrYHet 138575 138603 -208435 + AT_rich Low_complexity Low_complexity 1 28 0 1 586 23 78 0 0 chrYHet 146090 146141 -200897 + AT_rich Low_complexity Low_complexity 1 51 0 1 586 29 0 0 0 chrYHet 147114 147143 -199895 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 24 0 0 0 chrYHet 147639 147663 -199375 + AT_rich Low_complexity Low_complexity 1 24 0 1 586 508 180 108 74 chrYHet 148297 148529 -198509 - TART LINE telomeric -6483 7994 7885 1 586 1046 190 23 43 chrYHet 148530 148788 -198250 - TART_B1 LINE telomeric -10056 598 346 1 586 2156 168 101 91 chrYHet 148787 149480 -197558 - TART LINE telomeric -6446 8031 7332 1 586 27 0 0 0 chrYHet 150313 150340 -196698 + AT_rich Low_complexity Low_complexity 1 27 0 1 586 21 0 0 0 chrYHet 150622 150643 -196395 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 3600 41 143 0 chrYHet 151473 151956 -195082 + DOC3_DM LINE Jockey 2290 2841 -1899 1 586 3179 48 22 0 chrYHet 151951 152400 -194638 + DOC3_DM LINE Jockey 2993 3515 -1225 1 586 1516 41 35 0 chrYHet 152401 152598 -194440 + DOC3_DM LINE Jockey 4484 4687 -53 1 586 294 341 69 23 chrYHet 152722 152896 -194142 + T412LTR LTR LTR 42 223 -258 1 586 316 290 37 30 chrYHet 152763 152898 -194140 + Gypsy11_LTR LTR Gypsy 110 245 -207 1 586 798 269 17 8 chrYHet 153130 153370 -193668 - TART_B1 LINE telomeric -1662 8992 8751 1 586 28 29 0 0 chrYHet 153448 153483 -193555 + AT_rich Low_complexity Low_complexity 1 35 0 1 586 235 121 0 0 chrYHet 153862 153895 -193143 + Copia_I LTR Copia 229 261 -4332 1 586 3011 84 29 9 chrYHet 153897 154318 -192720 + Copia_I LTR Copia 809 1237 -3356 1 586 287 70 0 44 chrYHet 154331 154374 -192664 + Copia_I LTR Copia 1307 1347 -3246 1 586 2287 15 4 0 chrYHet 154374 154640 -192398 - MDG3_LTR LTR Gypsy 0 267 1 1 586 11631 4 0 1 chrYHet 154640 155974 -191064 - MDG3_I LTR Gypsy 0 4986 3654 1 586 437 189 65 107 chrYHet 156146 156352 -190686 - Gypsy8_LTR LTR Gypsy 0 304 1 1 586 1520 84 13 4 chrYHet 156354 156581 -190457 - DNAREP1_DM LINE Penelope -344 250 22 1 586 15446 17 23 1 chrYHet 157385 159167 -187871 - Invader3_I LTR Gypsy -3066 1822 1 1 586 2328 31 42 3 chrYHet 159167 159454 -187584 - Invader3_LTR LTR Gypsy 0 298 1 1 586 3045 128 82 25 chrYHet 159561 160160 -186878 - QUASIMODO_LTR LTR Gypsy -25 633 1 1 586 34 0 0 0 chrYHet 160160 160194 -186844 + AT_rich Low_complexity Low_complexity 1 34 0 1 586 27 49 0 0 chrYHet 160324 160365 -186673 + AT_rich Low_complexity Low_complexity 1 41 0 1 586 500 63 0 0 chrYHet 160721 160784 -186254 + DNAREP1_DM LINE Penelope 1 63 -531 1 586 2573 158 95 15 chrYHet 160930 161477 -185561 - DNAREP1_DM LINE Penelope -3 591 1 1 586 1314 152 132 15 chrYHet 162185 162458 -184580 - DNAREP1_DM LINE Penelope 0 594 290 1 586 1024 125 204 79 chrYHet 162466 162775 -184263 - DNAREP1_DM LINE Penelope -1 593 114 1 586 1337 95 104 0 chrYHet 162766 162977 -184061 - G5A_DM LINE Jockey -145 2696 2464 1 586 263 160 200 0 chrYHet 162982 163057 -183981 + DNAREP1_DM LINE Penelope 224 313 -281 1 586 985 186 44 24 chrYHet 163090 163338 -183700 - BS3_DM LINE Jockey 0 1790 1538 1 586 46 0 0 0 chrYHet 163713 163759 -183279 + AT_rich Low_complexity Low_complexity 1 46 0 1 586 3768 2 102 0 chrYHet 164151 164600 -182438 + QUASIMODO_LTR LTR Gypsy 164 658 0 1 586 23 101 0 0 chrYHet 165183 165262 -181776 + AT_rich Low_complexity Low_complexity 1 79 0 1 586 23 0 0 0 chrYHet 165327 165350 -181688 + AT_rich Low_complexity Low_complexity 1 23 0 1 586 25 31 0 0 chrYHet 165394 165426 -181612 + AT_rich Low_complexity Low_complexity 1 32 0 1 586 736 298 33 33 chrYHet 166607 166996 -180042 + HMSBEAGLE_I LTR Gypsy 3109 3497 -3032 1 586 582 80 22 11 chrYHet 166995 167084 -179954 + DMCR1A LINE CR1 3620 3709 -761 1 586 1505 75 71 0 chrYHet 167073 167312 -179726 + DMCR1A LINE CR1 4124 4379 -91 1 586 227 304 22 15 chrYHet 175670 175807 -171231 + HMSBEAGLE_I LTR Gypsy 3109 3246 -3283 1 586 1542 286 31 10 chrYHet 175853 176433 -170605 + HMSBEAGLE_I LTR Gypsy 3342 3933 -2596 1 586 421 322 22 33 chrYHet 176561 176927 -170111 + BURDOCK_I LTR Gypsy 3198 3559 -2301 1 586 552 353 13 9 chrYHet 177343 177875 -169163 + HMSBEAGLE_I LTR Gypsy 4745 5510 -1019 1 586 36 40 0 0 chrYHet 178108 178158 -168880 + AT_rich Low_complexity Low_complexity 1 50 0 1 586 23 33 0 0 chrYHet 179593 179623 -167415 + AT_rich Low_complexity Low_complexity 1 30 0 1 586 221 133 44 0 chrYHet 179995 180040 -166998 + (TAA)n Simple_repeat Simple_repeat 3 49 0 1 586 24 32 0 0 chrYHet 180752 180783 -166255 + AT_rich Low_complexity Low_complexity 1 31 0 1 586 23 68 0 0 chrYHet 181211 181255 -165783 + AT_rich Low_complexity Low_complexity 1 44 0 1 586 1770 0 0 0 chrYHet 181983 182181 -164857 + Copia2_LTR_DM LTR Copia 1 198 0 1 586 2300 22 0 0 chrYHet 182181 182453 -164585 + Copia2_I LTR Copia 1 272 -3890 1 586 717 128 103 71 chrYHet 187986 188300 -158738 + DNAREP1_DM LINE Penelope 175 539 -55 1 586 30 59 0 0 chrYHet 188625 188676 -158362 + AT_rich Low_complexity Low_complexity 1 51 0 1 586 650 104 146 15 chrYHet 189955 190092 -156946 + TLD2 Unknown Unknown 37 191 -27 1 586 303 297 26 26 chrYHet 190095 190289 -156749 + DM297_I LTR Gypsy 2841 2991 -3176 1 586 278 206 10 42 chrYHet 191027 191123 -155915 + DNAREP1_DM LINE Penelope 69 161 -433 1 586 529 153 0 0 chrYHet 191187 191272 -155766 + DNAREP1_DM LINE Penelope 361 445 -149 1 586 382 218 29 10 chrYHet 191418 191520 -155518 + DMCR1A LINE CR1 4323 4426 -44 1 586 21 95 0 0 chrYHet 191646 191709 -155329 + AT_rich Low_complexity Low_complexity 1 63 0 1 586 741 87 10 0 chrYHet 192078 192181 -154857 + DNAREP1_DM LINE Penelope 1 104 -490 1 586 21 0 0 0 chrYHet 192670 192691 -154347 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 22 0 0 0 chrYHet 192909 192931 -154107 + AT_rich Low_complexity Low_complexity 1 22 0 1 586 7687 63 87 6 chrYHet 193253 194361 -152677 + IDEFIX_I LTR Gypsy 2348 3544 -2084 1 586 10051 52 34 30 chrYHet 194361 195735 -151303 + Gypsy12_LTR LTR Gypsy 1 1380 -956 1 586 1756 179 105 16 chrYHet 202256 202876 -144162 - HETA LINE telomeric -478 5603 5079 1 586 1454 71 79 9 chrYHet 202894 203122 -143916 + IDEFIX_LTR LTR Gypsy 195 438 -156 1 586 952 94 202 0 chrYHet 203207 203504 -143534 - DNAREP1_DM LINE Penelope -5 589 233 1 586 205 75 0 48 chrYHet 203557 203599 -143439 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1 586 1419 91 5 33 chrYHet 203733 203948 -143090 - BS2 LINE Jockey -5 4716 4508 1 586 1108 226 79 0 chrYHet 203951 204216 -142822 + Gypsy_I LTR Gypsy 5702 5987 -520 1 586 1867 216 109 21 chrYHet 204214 205053 -141985 + Gypsy_I LTR Gypsy 6020 7167 -355 1 586 581 123 259 49 chrYHet 205421 205583 -141455 + DNAREP1_DM LINE Penelope 204 399 -195 1 586 21 0 0 0 chrYHet 205681 205702 -141336 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 21 0 0 0 chrYHet 205758 205779 -141259 + AT_rich Low_complexity Low_complexity 1 21 0 1 586 840 216 140 26 chrYHet 206452 206795 -140243 - HETA LINE telomeric -1 6080 5699 1 586 1377 134 60 14 chrYHet 206814 207095 -139943 - TART LINE telomeric -3814 10663 10370 1 586 766 218 137 54 chrYHet 207082 207359 -139679 - TAHRE LINE telomeric -358 10105 9885 1 586 1264 130 23 9 chrYHet 213370 213587 -133451 - HETA LINE telomeric -664 5417 5198 1 586 702 166 7 0 chrYHet 213603 213742 -133296 - HETA LINE telomeric -1101 4980 4841 1 586 1601 194 43 6 chrYHet 213765 214112 -132926 - HETA LINE telomeric -1702 4379 4020 1 586 267 80 0 152 chrYHet 214506 214565 -132473 + Invader1_LTR LTR Gypsy 1 50 -373 1 586 369 194 62 31 chrYHet 214943 215039 -131999 - Gypsy5_I LTR Gypsy 0 6509 6411 1 586 22 35 0 0 chrYHet 224927 224956 -122082 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 2535 306 20 14 chrYHet 225062 226060 -120978 - Gypsy5_I LTR Gypsy -2979 3530 2527 1 586 540 73 0 0 chrYHet 226076 226158 -120880 + (TAA)n Simple_repeat Simple_repeat 3 84 0 1 586 1614 140 82 10 chrYHet 226160 226463 -120575 + MDG1_LTR LTR Gypsy 89 413 -29 1 586 436 221 86 61 chrYHet 226463 226661 -120377 + MDG1_I LTR Gypsy 90 334 -6279 1 586 779 123 16 105 chrYHet 227158 227348 -119690 + DM297_LTR LTR Gypsy 71 243 -171 1 586 22 35 0 0 chrYHet 227355 227384 -119654 + AT_rich Low_complexity Low_complexity 1 29 0 1 586 411 121 0 0 chrYHet 227851 227917 -119121 - DNAREP1_DM LINE Penelope 0 594 529 1 586 617 145 191 0 chrYHet 227919 228050 -118988 - DNAREP1_DM LINE Penelope -174 420 265 1 586 517 128 0 0 chrYHet 228050 228128 -118910 - DNAREP1_DM LINE Penelope -503 91 14 1 586 256 202 85 34 chrYHet 228238 228356 -118682 - TIRANT_I LTR Gypsy -1045 6647 6524 1 586 28 79 0 0 chrYHet 228407 228470 -118568 + AT_rich Low_complexity Low_complexity 1 63 0 1 586 625 158 153 4 chrYHet 228482 228707 -118331 - DNAREP1_DM LINE Penelope -336 258 1 1 586 24 0 0 0 chrYHet 230149 230173 -116865 + AT_rich Low_complexity Low_complexity 1 24 0 1 586 47 0 0 0 chrYHet 230337 230384 -116654 + AT_rich Low_complexity Low_complexity 1 47 0 1 586 25 75 0 0 chrYHet 232810 232863 -114175 + AT_rich Low_complexity Low_complexity 1 53 0 1 586 24 67 0 0 chrYHet 233407 233452 -113586 + AT_rich Low_complexity Low_complexity 1 45 0 1 586 1037 120 0 0 chrYHet 233627 233794 -113244 + DNAREP1_DM LINE Penelope 1 167 -427 1 586 2470 153 103 115 chrYHet 233843 234842 -112196 - PROTOP_B DNA P -1 1152 166 1 586 8213 36 53 6 chrYHet 242596 243726 -103312 - NINJA_I LTR Pao -4591 1420 238 1 586 2246 82 64 0 chrYHet 243966 244308 -102730 - IDEFIX_LTR LTR Gypsy 0 594 231 1 586 494 289 21 16 chrYHet 244410 244603 -102435 - DIVER2_I LTR Pao -1758 2389 2196 1 586 345 356 19 10 chrYHet 244662 244869 -102169 - DIVER2_I LTR Pao -2344 1803 1595 1 586 1580 151 53 56 chrYHet 244865 245202 -101836 - G3_DM LINE Jockey -4103 502 167 1 586 1918 147 62 50 chrYHet 254012 254428 -92610 + G3_DM LINE Jockey 82 502 -4103 1 586 321 335 29 19 chrYHet 254424 254631 -92407 + DIVER2_I LTR Pao 1595 1803 -2344 1 586 424 259 86 7 chrYHet 254731 254871 -92167 + DIVER2_I LTR Pao 2239 2389 -1758 1 586 987 92 32 172 chrYHet 255375 255625 -91413 - ACCORD2_LTR LTR Gypsy 0 215 1 1 586 2665 87 25 21 chrYHet 255641 256078 -90960 - ACCORD2_I LTR Gypsy -10 7202 6764 1 587 976 33 0 0 chrYHet 263495 263616 -83422 - DMCR1A LINE CR1 -1292 3178 3058 1 587 1654 112 182 18 chrYHet 263629 264248 -82790 + DOC4_DM LINE Jockey 1208 1927 -864 1 587 1697 91 20 0 chrYHet 264430 264683 -82355 + DOC4_DM LINE Jockey 2534 2791 0 1 587 1514 137 189 54 chrYHet 265367 265738 -81300 + G3_DM LINE Jockey 82 502 -4103 1 587 349 349 19 14 chrYHet 265729 265941 -81097 + DIVER2_I LTR Pao 1591 1803 -2344 1 587 479 300 21 16 chrYHet 266000 266193 -80845 + DIVER2_I LTR Pao 2196 2389 -1758 1 587 225 292 0 0 chrYHet 266673 266745 -80293 + DIVER2_I LTR Pao 2428 2499 -1648 1 587 319 328 8 0 chrYHet 267954 268079 -78959 + NINJA_I LTR Pao 1414 1539 -4472 1 587 1370 343 88 14 chrYHet 268172 269191 -77847 + NINJA_I LTR Pao 2776 3870 -2141 1 587 986 278 135 10 chrYHet 269206 269717 -77321 + NINJA_I LTR Pao 4029 4603 -1408 1 587 850 347 54 17 chrYHet 269733 270384 -76654 + NINJA_I LTR Pao 4839 5513 -498 1 587 23 33 0 0 chrYHet 271044 271074 -75964 + AT_rich Low_complexity Low_complexity 1 30 0 1 587 38 85 0 0 chrYHet 271475 271569 -75469 + AT_rich Low_complexity Low_complexity 1 94 0 1 587 1552 134 94 20 chrYHet 271763 272114 -74924 - TART LINE telomeric -3812 10665 10289 1 587 1546 119 7 18 chrYHet 272128 272411 -74627 - HETA LINE telomeric -56 6025 5746 1 587 745 325 33 20 chrYHet 275850 276654 -70384 - TABOR_I LTR Gypsy -3606 2990 2170 1 587 40 83 0 0 chrYHet 276708 276804 -70234 + AT_rich Low_complexity Low_complexity 1 96 0 1 587 2489 164 45 26 chrYHet 276998 277812 -69226 - HETA LINE telomeric -2 6079 5629 1 587 232 127 0 35 chrYHet 277812 277869 -69169 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1 587 310 208 74 19 chrYHet 277882 277987 -69051 - Gypsy_LTR LTR Gypsy -20 462 352 1 587 1656 109 3 147 chrYHet 277987 278362 -68676 - Stalker3_LTR LTR Gypsy 0 372 52 1 587 4184 26 0 0 chrYHet 278480 278986 -68052 - FW_DM LINE Jockey -4186 506 1 1 587 317 109 0 18 chrYHet 279525 279581 -67457 + DNAREP1_DM LINE Penelope 196 250 -344 1 587 2336 70 0 14 chrYHet 280483 280850 -66188 - QUASIMODO_LTR LTR Gypsy -292 366 29 1 587 5781 318 0 18 chrYHet 280917 282002 -65036 - DM176_I LTR Gypsy -5227 1193 129 1 587 516 24 0 58 chrYHet 282002 282089 -64949 - QUASIMODO_LTR LTR Gypsy -548 110 29 1 587 11635 20 21 3 chrYHet 283030 284469 -62569 - FW_DM LINE Jockey -3 4689 3226 1 587 396 20 0 0 chrYHet 284465 284514 -62524 - FW_DM LINE Jockey -1652 3040 2992 1 587 720 11 0 0 chrYHet 284513 284600 -62438 - FW_DM LINE Jockey -1865 2827 2741 1 587 297 193 11 22 chrYHet 292134 292224 -54814 + DMRP1 Unknown Unknown 166 254 -92 1 587 998 52 161 7 chrYHet 292337 292492 -54546 - TART LINE telomeric -6151 8326 8148 1 587 11577 37 35 2 chrYHet 292489 294888 -52150 + DMCR1A LINE CR1 1699 4226 -244 1 587 2591 96 71 5 chrYHet 295145 295552 -51486 - IDEFIX_LTR LTR Gypsy -50 544 111 1 587 856 55 0 0 chrYHet 295649 295759 -51279 - IDEFIX_LTR LTR Gypsy -484 110 1 1 587 275 100 0 0 chrYHet 295727 295767 -51271 + BARI1 DNA Tc1 3 42 -1708 1 587 3043 29 0 0 chrYHet 295788 296134 -50904 + Invader4_LTR LTR Gypsy 1 346 0 1 587 1529 28 0 16 chrYHet 296134 296316 -50722 + Invader4_I LTR Gypsy 1 179 -2234 1 587 4353 107 18 17 chrYHet 296296 296998 -50040 + Invader4_I LTR Gypsy 504 1204 -1982 1 587 352 34 16 79 chrYHet 296989 297052 -49986 + Invader4_I LTR Gypsy 1021 1079 -1334 1 587 2643 44 11 1 chrYHet 297065 297575 -49463 + Invader4_I LTR Gypsy 1694 2336 -77 1 587 1963 127 125 19 chrYHet 297535 297912 -49126 + TART LINE telomeric 7612 8028 -6449 1 587 2399 111 83 25 chrYHet 297914 298310 -48728 + TART LINE telomeric 3611 4029 -10448 1 587 5098 151 66 93 chrYHet 298281 299575 -47463 + TART LINE telomeric 4698 5866 -8611 1 587 9549 24 0 3 chrYHet 299575 300683 -46355 + PROTOP_A DNA P 1 1105 0 1 587 3660 135 92 60 chrYHet 300683 302098 -44940 + TART LINE telomeric 5860 7320 -7157 1 587 270 132 0 0 chrYHet 302098 302136 -44902 + TART LINE telomeric 14036 14073 -404 1 587 4531 127 0 0 chrYHet 302104 302835 -44203 + TART_B1 LINE telomeric 1058 1788 -8866 1 587 3602 96 158 10 chrYHet 302966 303121 -43917 + DMRT1B LINE R1 1 141 -5042 1 587 180 0 0 0 chrYHet 303121 303141 -43897 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 587 3602 43 148 0 chrYHet 303141 303509 -43529 + DMRT1B LINE R1 142 555 -4628 1 587 424 40 0 0 chrYHet 303509 303559 -43479 + DMRT1B LINE R1 878 927 -4256 1 587 6467 47 51 0 chrYHet 303558 304364 -42674 + DMRT1B LINE R1 1683 2529 -2654 1 587 2989 52 58 0 chrYHet 304352 304733 -42305 + DMRT1B LINE R1 3038 3440 -1743 1 587 222 147 43 14 chrYHet 304769 304838 -42200 + (TTATA)n Simple_repeat Simple_repeat 4 74 0 1 587 26 50 0 0 chrYHet 305003 305043 -41995 + AT_rich Low_complexity Low_complexity 1 40 0 1 587 22 0 0 0 chrYHet 305222 305244 -41794 + AT_rich Low_complexity Low_complexity 1 22 0 1 587 25 51 0 0 chrYHet 306303 306342 -40696 + AT_rich Low_complexity Low_complexity 1 39 0 1 587 1356 54 6 0 chrYHet 307393 307559 -39479 - PROTOP_A DNA P 0 1105 939 1 587 4768 32 0 2 chrYHet 307546 308107 -38931 - PROTOP_A DNA P -498 607 48 1 587 7010 15 6 0 chrYHet 308228 309020 -38018 - STALKER4_I LTR Gypsy -4154 2376 1580 1 587 2837 139 126 42 chrYHet 309018 309850 -37188 - STALKER4_I LTR Gypsy -5295 1235 291 1 587 28 48 0 0 chrYHet 309857 309899 -37139 + AT_rich Low_complexity Low_complexity 1 42 0 1 587 3170 40 5 3 chrYHet 310037 310415 -36623 - STALKER4_LTR LTR Gypsy -23 379 1 1 587 1845 38 19 0 chrYHet 310415 310676 -36362 - STALKER4_I LTR Gypsy 0 6530 6265 1 587 2516 13 0 91 chrYHet 310777 311116 -35922 + MICROPIA_LTR LTR Gypsy 169 476 0 1 587 1356 0 0 7 chrYHet 311116 311267 -35771 + STALKER4_LTR LTR Gypsy 253 402 0 1 587 2714 146 19 24 chrYHet 311294 311841 -35197 - TART LINE telomeric -8616 5861 4977 1 587 408 89 0 0 chrYHet 311820 311876 -35162 - PROTOP_A DNA P -1024 81 26 1 587 773 72 0 0 chrYHet 311876 311973 -35065 + PROTOP_A DNA P 1 97 -1008 1 587 4163 11 0 23 chrYHet 311971 312457 -34581 + PROTOP_A DNA P 631 1105 0 1 587 3234 62 4 16 chrYHet 314124 314563 -32475 - STALKER4_LTR LTR Gypsy -3 399 1 1 587 258 61 0 0 chrYHet 314563 314596 -32442 - STALKER4_I LTR Gypsy 0 6530 6498 1 587 21461 50 2 1 chrYHet 314591 317225 -29813 - STALKER4_I LTR Gypsy -237 6293 3657 1 587 9962 16 7 0 chrYHet 317220 318336 -28702 + G2_DM LINE Jockey 169 1292 -1810 1 587 7126 31 11 0 chrYHet 318340 319190 -27848 - PROTOP_A DNA P -221 884 26 1 587 874 21 0 0 chrYHet 319190 319287 -27751 + PROTOP_A DNA P 1 97 -1008 1 587 3860 18 48 4 chrYHet 319285 319740 -27298 + PROTOP_A DNA P 631 1105 0 1 587 3364 55 1 14 chrYHet 321407 321846 -25192 - STALKER4_LTR LTR Gypsy -3 399 1 1 587 258 61 0 0 chrYHet 321846 321879 -25159 - STALKER4_I LTR Gypsy 0 6530 6498 1 587 21451 49 3 1 chrYHet 321874 324507 -22531 - STALKER4_I LTR Gypsy -237 6293 3657 1 587 10101 16 0 0 chrYHet 324502 325626 -21412 + G2_DM LINE Jockey 169 1292 -1810 1 587 7318 27 2 0 chrYHet 325630 326487 -20551 - PROTOP_A DNA P -221 884 26 1 587 874 21 0 0 chrYHet 326487 326584 -20454 + PROTOP_A DNA P 1 97 -1008 1 587 4145 15 0 23 chrYHet 326582 327068 -19970 + PROTOP_A DNA P 631 1105 0 1 587 3364 55 1 14 chrYHet 328735 329174 -17864 - STALKER4_LTR LTR Gypsy -3 399 1 1 587 258 61 0 0 chrYHet 329174 329207 -17831 - STALKER4_I LTR Gypsy 0 6530 6498 1 587 6993 79 7 0 chrYHet 329202 330156 -16882 - STALKER4_I LTR Gypsy -237 6293 5333 1 587 3156 13 82 0 chrYHet 336156 336706 -10332 + STALKER4_I LTR Gypsy 5936 6530 0 1 587 3170 42 5 0 chrYHet 336706 337083 -9955 + STALKER4_LTR LTR Gypsy 1 379 -23 1 587 6053 1 0 0 chrYHet 338561 339218 -7820 - QUASIMODO_LTR LTR Gypsy 0 658 2 1 587 204 40 0 0 chrYHet 339218 339243 -7795 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 587 289 188 0 0 chrYHet 340191 340271 -6767 + ROO_I LTR Pao 653 732 -7524 1 587 4591 59 107 29 chrYHet 340786 341467 -5571 + TART LINE telomeric 7295 8028 -6449 1 587 11879 142 131 55 chrYHet 341470 344325 -2713 + TART LINE telomeric 4698 7283 -7194 1 587 1680 46 108 0 chrYHet 344394 344736 -2302 - STALKER4_LTR LTR Gypsy -23 379 1 1 587 5971 18 7 1 chrYHet 344736 345471 -1567 - STALKER4_I LTR Gypsy 0 6530 5792 1